BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 007517
(600 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|359487569|ref|XP_002277031.2| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Vitis vinifera]
Length = 703
Score = 1008 bits (2607), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 477/600 (79%), Positives = 538/600 (89%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MPERNVVSWTAMVRGYV+EG+++EA TLFWQMPEKNVVSWTVMLGG I+ RID+AR LF
Sbjct: 104 MPERNVVSWTAMVRGYVQEGLVSEAETLFWQMPEKNVVSWTVMLGGLIQVRRIDEARGLF 163
Query: 61 DMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARK 120
D+MP KDVVA+TNM+ GYCQ+GR+ E RE+FDEMP++NVISWTTMISGYV N ++DVARK
Sbjct: 164 DIMPVKDVVARTNMISGYCQEGRLAEARELFDEMPRRNVISWTTMISGYVQNGQVDVARK 223
Query: 121 LFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKA 180
LFEVMPEKNEVSWTAMLMGYTQ GRI++A ELF AMP+K+VVA N+MILG GQNGEV KA
Sbjct: 224 LFEVMPEKNEVSWTAMLMGYTQGGRIEEASELFDAMPVKAVVACNAMILGFGQNGEVAKA 283
Query: 181 RVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASL 240
R VFDQ+REKDD TWS MIKVYERKG+E+E ++LF LMQ+EGV+ NFPSLISVLSVCASL
Sbjct: 284 RQVFDQIREKDDGTWSAMIKVYERKGFEVEALNLFALMQREGVQSNFPSLISVLSVCASL 343
Query: 241 ASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSII 300
ASLDHGRQVHA+LV+ QFD DV+VASVLITMY+KCG+LVK + IFD F+ KDIVMWNSII
Sbjct: 344 ASLDHGRQVHAELVKSQFDSDVFVASVLITMYVKCGDLVKARQIFDRFSPKDIVMWNSII 403
Query: 301 SGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLV 360
+GYAQ+GL E++L+VFHEM SSG+ D VT VGVLSACSYTGKVKEG EIFESMKSKYLV
Sbjct: 404 TGYAQHGLVEEALQVFHEMCSSGMATDGVTFVGVLSACSYTGKVKEGLEIFESMKSKYLV 463
Query: 361 EPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAK 420
EPKTEHYACMVDLLGRAG V DAM LI+ MP E DAIIWG+LLGACRTHM ++LAEVAAK
Sbjct: 464 EPKTEHYACMVDLLGRAGLVNDAMDLIQKMPVEADAIIWGALLGACRTHMNMNLAEVAAK 523
Query: 421 KLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFT 480
KLLQLEPKNAGPYILLSNIYAS+GR+ DVAELR+NMR + V K PGCSWIEVEK+VHMFT
Sbjct: 524 KLLQLEPKNAGPYILLSNIYASKGRWGDVAELRRNMRVKKVSKSPGCSWIEVEKRVHMFT 583
Query: 481 GRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAY 540
G HPE IM+MLEK+ G+LREAGY PDSSFVLHDVDEEEKV SL +HSE+LAVA+
Sbjct: 584 GGVSTKHPELSSIMKMLEKLDGMLREAGYYPDSSFVLHDVDEEEKVRSLGHHSERLAVAF 643
Query: 541 GLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
GL+K+PEG+PIRVMKNLRVCGDCHSAIKLI+K+ GREIILRDANRFHHFKDG CSCRDYW
Sbjct: 644 GLLKVPEGMPIRVMKNLRVCGDCHSAIKLIAKITGREIILRDANRFHHFKDGFCSCRDYW 703
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 128/406 (31%), Positives = 216/406 (53%), Gaps = 16/406 (3%)
Query: 7 VSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEK 66
+++ + + Y G I A +F +MP+K +VSW M+ G+ +++R +AR LFD MPE+
Sbjct: 17 IAYNSQIARYARIGQIESARRVFDEMPDKGIVSWNSMVAGYFQNNRPREARYLFDKMPER 76
Query: 67 DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMP 126
+ V+ ++ GY ++ V E R+ FD MP++NV+SWT M+ GYV + A LF MP
Sbjct: 77 NTVSWNGLISGYVKNRMVSEARKAFDTMPERNVVSWTAMVRGYVQEGLVSEAETLFWQMP 136
Query: 127 EKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQ 186
EKN VSWT ML G Q RI +A LF MP+K VVA +MI G Q G + +AR +FD+
Sbjct: 137 EKNVVSWTVMLGGLIQVRRIDEARGLFDIMPVKDVVARTNMISGYCQEGRLAEARELFDE 196
Query: 187 MREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHG 246
M ++ +W+ MI Y + G LF +M ++ V++ +++ + G
Sbjct: 197 MPRRNVISWTTMISGYVQNGQVDVARKLFEVMPEKN-EVSWTAML--------MGYTQGG 247
Query: 247 RQVHAQLVRCQFDVDVYVA-SVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQ 305
R A + V VA + +I + + GE+ K + +FD KD W+++I Y +
Sbjct: 248 RIEEASELFDAMPVKAVVACNAMILGFGQNGEVAKARQVFDQIREKDDGTWSAMIKVYER 307
Query: 306 YGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIF-ESMKSKYLVEPKT 364
G ++L +F M GV + +L+ VLS C+ + GR++ E +KS++ +
Sbjct: 308 KGFEVEALNLFALMQREGVQSNFPSLISVLSVCASLASLDHGRQVHAELVKSQF--DSDV 365
Query: 365 EHYACMVDLLGRAGQVEDAMKLIEAMPFEP-DAIIWGSLLGACRTH 409
+ ++ + + G + A ++ + F P D ++W S++ H
Sbjct: 366 FVASVLITMYVKCGDLVKARQIFDR--FSPKDIVMWNSIITGYAQH 409
>gi|224124974|ref|XP_002319471.1| predicted protein [Populus trichocarpa]
gi|222857847|gb|EEE95394.1| predicted protein [Populus trichocarpa]
Length = 703
Score = 992 bits (2564), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 458/600 (76%), Positives = 526/600 (87%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MPERNVVSWT+MVRGYV+EG+I EA LFW+MPEKNVVSWTVMLGG I D R+D+ARRLF
Sbjct: 104 MPERNVVSWTSMVRGYVQEGLIDEAELLFWRMPEKNVVSWTVMLGGLIEDGRVDEARRLF 163
Query: 61 DMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARK 120
DM+P KDVVA TNM+ G C +GR+ E REIFDEMP++NV++WT+MISGY NN++DVARK
Sbjct: 164 DMIPVKDVVASTNMIGGLCSEGRLSEAREIFDEMPQRNVVAWTSMISGYAMNNKVDVARK 223
Query: 121 LFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKA 180
LFEVMP+KNEV+WTAML GYT+ GRI +A ELFKAMP+K V A N MI+G G NGEV KA
Sbjct: 224 LFEVMPDKNEVTWTAMLKGYTRSGRINEAAELFKAMPVKPVAACNGMIMGFGLNGEVGKA 283
Query: 181 RVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASL 240
R VFDQM+EKDD TWS +IK+YERKG+ELE + LF+LMQ+EGVR NFPS+IS+LSVC SL
Sbjct: 284 RWVFDQMKEKDDGTWSALIKIYERKGFELEALALFSLMQREGVRPNFPSIISILSVCGSL 343
Query: 241 ASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSII 300
ASLDHGRQVH+QLVR FD+D+YV+SVLITMYIKCG+LV GK +FD F+SKDIVMWNSII
Sbjct: 344 ASLDHGRQVHSQLVRSHFDLDIYVSSVLITMYIKCGDLVTGKRVFDRFSSKDIVMWNSII 403
Query: 301 SGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLV 360
+GYAQ+G GEK+L+VFHEMFSSG PD++T +GVLSAC YTGKVKEG EIFESMKSKY V
Sbjct: 404 AGYAQHGFGEKALEVFHEMFSSGAAPDEITFIGVLSACGYTGKVKEGLEIFESMKSKYQV 463
Query: 361 EPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAK 420
+ KTEHYACMVDLLGRAG++ +AM LIE MP E DAI+WG+LL ACRTH LDLAE+AAK
Sbjct: 464 DQKTEHYACMVDLLGRAGKLNEAMNLIENMPVEADAIVWGALLSACRTHKNLDLAEIAAK 523
Query: 421 KLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFT 480
KLLQLEP +AGPYILLSN+YASQ R+ DVAELRK MR RNV K PGCSWIEV+ KVHMFT
Sbjct: 524 KLLQLEPSSAGPYILLSNLYASQSRWKDVAELRKTMRARNVSKSPGCSWIEVDNKVHMFT 583
Query: 481 GRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAY 540
G SHPEH MIM+ LEK+G LREAGYCPD SFV+HDVDEE+KVHSLR+HSEK+AVAY
Sbjct: 584 GGGSASHPEHEMIMKKLEKLGASLREAGYCPDGSFVMHDVDEEDKVHSLRHHSEKMAVAY 643
Query: 541 GLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
GL+K+P G PIRVMKNLRVCGDCHSAIKLI++V GREIILRDANRFHHFKDGLCSCRD+W
Sbjct: 644 GLLKVPVGKPIRVMKNLRVCGDCHSAIKLIAQVTGREIILRDANRFHHFKDGLCSCRDFW 703
Score = 201 bits (511), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 118/415 (28%), Positives = 211/415 (50%), Gaps = 17/415 (4%)
Query: 1 MPERNVVSWTAMVRG-----YVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDD 55
+P R+ S +A + + G I A +F + K V SW ++ G+ + R +
Sbjct: 6 IPYRSYFSSSAAITQCQISYFARLGQIDRARNIFDDLQSKTVTSWNAIVAGYFHNKRPAE 65
Query: 56 ARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRI 115
A++LFD MPE++ ++ +V GY ++G + E R++FD+MP++NV+SWT+M+ GYV I
Sbjct: 66 AQKLFDKMPERNTISWNGLVSGYVKNGMISEARKVFDKMPERNVVSWTSMVRGYVQEGLI 125
Query: 116 DVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNG 175
D A LF MPEKN VSWT ML G + GR+ +A LF +P+K VVAS +MI GL G
Sbjct: 126 DEAELLFWRMPEKNVVSWTVMLGGLIEDGRVDEARRLFDMIPVKDVVASTNMIGGLCSEG 185
Query: 176 EVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLS 235
+ +AR +FD+M +++ W+ MI Y LF +M + V + +++ +
Sbjct: 186 RLSEAREIFDEMPQRNVVAWTSMISGYAMNNKVDVARKLFEVMPDKN-EVTWTAMLKGYT 244
Query: 236 VCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVM 295
+ A+L + V + +I + GE+ K + +FD KD
Sbjct: 245 RSGRINEA-------AELFKAMPVKPVAACNGMIMGFGLNGEVGKARWVFDQMKEKDDGT 297
Query: 296 WNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESM- 354
W+++I Y + G ++L +F M GV P+ +++ +LS C + GR++ +
Sbjct: 298 WSALIKIYERKGFELEALALFSLMQREGVRPNFPSIISILSVCGSLASLDHGRQVHSQLV 357
Query: 355 KSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTH 409
+S + ++ + ++ + + G + ++ + D ++W S++ H
Sbjct: 358 RSHFDLDIYVS--SVLITMYIKCGDLVTGKRVFDRFS-SKDIVMWNSIIAGYAQH 409
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 97/209 (46%), Gaps = 15/209 (7%)
Query: 255 RCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLK 314
R F + I+ + + G++ + + IFD+ SK + WN+I++GY ++ K
Sbjct: 9 RSYFSSSAAITQCQISYFARLGQIDRARNIFDDLQSKTVTSWNAIVAGYFHNKRPAEAQK 68
Query: 315 VFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLL 374
+F +M + ++ G++S G + E R++F+ M + +V + MV
Sbjct: 69 LFDKMPER----NTISWNGLVSGYVKNGMISEARKVFDKMPERNVVS-----WTSMVRGY 119
Query: 375 GRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEP-KNAGPY 433
+ G +++A L MP E + + W +LG ++D A++L + P K+
Sbjct: 120 VQEGLIDEAELLFWRMP-EKNVVSWTVMLGGLIEDGRVD----EARRLFDMIPVKDVVAS 174
Query: 434 ILLSNIYASQGRFHDVAELRKNMRKRNVI 462
+ S+GR + E+ M +RNV+
Sbjct: 175 TNMIGGLCSEGRLSEAREIFDEMPQRNVV 203
>gi|449488311|ref|XP_004157997.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Cucumis sativus]
Length = 785
Score = 984 bits (2544), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/600 (77%), Positives = 525/600 (87%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MPERNVVSWTAMVRGYV+EGMI+EA TLFWQMPEKNVVSWTVMLGG +++ RID+A RLF
Sbjct: 186 MPERNVVSWTAMVRGYVKEGMISEAETLFWQMPEKNVVSWTVMLGGLLQEGRIDEACRLF 245
Query: 61 DMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARK 120
DMMPEKDVV +TNM+ GYCQ GR+ E R +FDEMP++NV+SWTTMI+GYV N ++D+ARK
Sbjct: 246 DMMPEKDVVTRTNMIGGYCQVGRLVEARMLFDEMPRRNVVSWTTMITGYVQNQQVDIARK 305
Query: 121 LFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKA 180
LFEVMPEKNEVSWTAML GYT CGR+ +A ELF AMP+KSVVA N+MIL GQNGEV KA
Sbjct: 306 LFEVMPEKNEVSWTAMLKGYTNCGRLDEASELFNAMPIKSVVACNAMILCFGQNGEVPKA 365
Query: 181 RVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASL 240
R VFDQMREKD+ TWS MIKVYERKG EL+ ++LF +MQ+EG+R NFPSLISVLSVCA L
Sbjct: 366 RQVFDQMREKDEGTWSAMIKVYERKGLELDALELFRMMQREGIRPNFPSLISVLSVCAGL 425
Query: 241 ASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSII 300
A+LDHGR++HAQLVR QFD+DVYVASVL++MYIKCG L K K +FD FA KD+VMWNSII
Sbjct: 426 ANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVKDVVMWNSII 485
Query: 301 SGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLV 360
+GYAQ+GLG ++L+VFH+M SG+MPDDVT VGVLSACSYTG VK+G EIF SM++KY V
Sbjct: 486 TGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSACSYTGNVKKGLEIFNSMETKYQV 545
Query: 361 EPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAK 420
E K EHYACMVDLLGRAG++ +AM LIE MP E DAIIWG+LLGACRTHMKLDLAEVAAK
Sbjct: 546 EQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAIIWGALLGACRTHMKLDLAEVAAK 605
Query: 421 KLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFT 480
KLL LEPKNAGP+ILLSNIYASQGR+ DVAELR+NMR R V K PGCSWI VEKKVH FT
Sbjct: 606 KLLVLEPKNAGPFILLSNIYASQGRWDDVAELRRNMRDRRVSKYPGCSWIVVEKKVHKFT 665
Query: 481 GRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAY 540
G D HPEH I R+LE + GLLREAGY PD SFVLHDVDEEEKV SL YHSEKLAVAY
Sbjct: 666 GGDSSGHPEHSEINRILEWLSGLLREAGYYPDQSFVLHDVDEEEKVQSLEYHSEKLAVAY 725
Query: 541 GLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
GL+K+P G+PIRVMKNLRVCGDCH+AIKLI+KV GREIILRDANRFHHFKDG CSCRDYW
Sbjct: 726 GLLKIPIGMPIRVMKNLRVCGDCHAAIKLIAKVTGREIILRDANRFHHFKDGSCSCRDYW 785
Score = 214 bits (546), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 122/405 (30%), Positives = 217/405 (53%), Gaps = 12/405 (2%)
Query: 6 VVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPE 65
++S +++ Y G I +A +F +M +KN++SW ++ G+ ++ R +A+ +FD M E
Sbjct: 98 IISRNSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMFDKMSE 157
Query: 66 KDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVM 125
++ ++ +V GY +G ++E RE+FD MP++NV+SWT M+ GYV I A LF M
Sbjct: 158 RNTISWNGLVSGYINNGMINEAREVFDRMPERNVVSWTAMVRGYVKEGMISEAETLFWQM 217
Query: 126 PEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFD 185
PEKN VSWT ML G Q GRI +A LF MP K VV +MI G Q G + +AR++FD
Sbjct: 218 PEKNVVSWTVMLGGLLQEGRIDEACRLFDMMPEKDVVTRTNMIGGYCQVGRLVEARMLFD 277
Query: 186 QMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDH 245
+M ++ +W+ MI Y + LF +M ++ V++ +++ + C L
Sbjct: 278 EMPRRNVVSWTTMITGYVQNQQVDIARKLFEVMPEKN-EVSWTAMLKGYTNCGRLDEA-- 334
Query: 246 GRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQ 305
++L V + +I + + GE+ K + +FD KD W+++I Y +
Sbjct: 335 -----SELFNAMPIKSVVACNAMILCFGQNGEVPKARQVFDQMREKDEGTWSAMIKVYER 389
Query: 306 YGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESM-KSKYLVEPKT 364
GL +L++F M G+ P+ +L+ VLS C+ + GREI + +S++ ++
Sbjct: 390 KGLELDALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYV 449
Query: 365 EHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTH 409
+ ++ + + G + A ++ + + D ++W S++ H
Sbjct: 450 A--SVLLSMYIKCGNLAKAKQVFDRFAVK-DVVMWNSIITGYAQH 491
Score = 46.2 bits (108), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 85/210 (40%), Gaps = 39/210 (18%)
Query: 282 KLIFDNF-ASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMP-------------- 326
+L+ + F S I+ NS+I+ Y++ G EK+ VF EM ++
Sbjct: 86 RLVLNRFYCSNFIISRNSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRP 145
Query: 327 -------------DDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDL 373
+ ++ G++S G + E RE+F+ M + +V + MV
Sbjct: 146 QEAQNMFDKMSERNTISWNGLVSGYINNGMINEAREVFDRMPERNVVS-----WTAMVRG 200
Query: 374 LGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEP-KNAGP 432
+ G + +A L MP E + + W +LG ++D A +L + P K+
Sbjct: 201 YVKEGMISEAETLFWQMP-EKNVVSWTVMLGGLLQEGRID----EACRLFDMMPEKDVVT 255
Query: 433 YILLSNIYASQGRFHDVAELRKNMRKRNVI 462
+ Y GR + L M +RNV+
Sbjct: 256 RTNMIGGYCQVGRLVEARMLFDEMPRRNVV 285
>gi|449453226|ref|XP_004144359.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Cucumis sativus]
Length = 785
Score = 984 bits (2544), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/600 (77%), Positives = 525/600 (87%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MPERNVVSWTAMVRGYV+EGMI+EA TLFWQMPEKNVVSWTVMLGG +++ RID+A RLF
Sbjct: 186 MPERNVVSWTAMVRGYVKEGMISEAETLFWQMPEKNVVSWTVMLGGLLQEGRIDEACRLF 245
Query: 61 DMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARK 120
DMMPEKDVV +TNM+ GYCQ GR+ E R +FDEMP++NV+SWTTMI+GYV N ++D+ARK
Sbjct: 246 DMMPEKDVVTRTNMIGGYCQVGRLVEARMLFDEMPRRNVVSWTTMITGYVQNQQVDIARK 305
Query: 121 LFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKA 180
LFEVMPEKNEVSWTAML GYT CGR+ +A ELF AMP+KSVVA N+MIL GQNGEV KA
Sbjct: 306 LFEVMPEKNEVSWTAMLKGYTNCGRLDEASELFNAMPIKSVVACNAMILCFGQNGEVPKA 365
Query: 181 RVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASL 240
R VFDQMREKD+ TWS MIKVYERKG EL+ ++LF +MQ+EG+R NFPSLISVLSVCA L
Sbjct: 366 RQVFDQMREKDEGTWSAMIKVYERKGLELDALELFRMMQREGIRPNFPSLISVLSVCAGL 425
Query: 241 ASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSII 300
A+LDHGR++HAQLVR QFD+DVYVASVL++MYIKCG L K K +FD FA KD+VMWNSII
Sbjct: 426 ANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVKDVVMWNSII 485
Query: 301 SGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLV 360
+GYAQ+GLG ++L+VFH+M SG+MPDDVT VGVLSACSYTG VK+G EIF SM++KY V
Sbjct: 486 TGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSACSYTGNVKKGLEIFNSMETKYQV 545
Query: 361 EPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAK 420
E K EHYACMVDLLGRAG++ +AM LIE MP E DAIIWG+LLGACRTHMKLDLAEVAAK
Sbjct: 546 EQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAIIWGALLGACRTHMKLDLAEVAAK 605
Query: 421 KLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFT 480
KLL LEPKNAGP+ILLSNIYASQGR+ DVAELR+NMR R V K PGCSWI VEKKVH FT
Sbjct: 606 KLLVLEPKNAGPFILLSNIYASQGRWDDVAELRRNMRDRRVSKYPGCSWIVVEKKVHKFT 665
Query: 481 GRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAY 540
G D HPEH I R+LE + GLLREAGY PD SFVLHDVDEEEKV SL YHSEKLAVAY
Sbjct: 666 GGDSSGHPEHSEINRILEWLSGLLREAGYYPDQSFVLHDVDEEEKVQSLEYHSEKLAVAY 725
Query: 541 GLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
GL+K+P G+PIRVMKNLRVCGDCH+AIKLI+KV GREIILRDANRFHHFKDG CSCRDYW
Sbjct: 726 GLLKIPIGMPIRVMKNLRVCGDCHAAIKLIAKVTGREIILRDANRFHHFKDGSCSCRDYW 785
Score = 214 bits (546), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 122/405 (30%), Positives = 217/405 (53%), Gaps = 12/405 (2%)
Query: 6 VVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPE 65
++S +++ Y G I +A +F +M +KN++SW ++ G+ ++ R +A+ +FD M E
Sbjct: 98 IISRNSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMFDKMSE 157
Query: 66 KDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVM 125
++ ++ +V GY +G ++E RE+FD MP++NV+SWT M+ GYV I A LF M
Sbjct: 158 RNTISWNGLVSGYINNGMINEAREVFDRMPERNVVSWTAMVRGYVKEGMISEAETLFWQM 217
Query: 126 PEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFD 185
PEKN VSWT ML G Q GRI +A LF MP K VV +MI G Q G + +AR++FD
Sbjct: 218 PEKNVVSWTVMLGGLLQEGRIDEACRLFDMMPEKDVVTRTNMIGGYCQVGRLVEARMLFD 277
Query: 186 QMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDH 245
+M ++ +W+ MI Y + LF +M ++ V++ +++ + C L
Sbjct: 278 EMPRRNVVSWTTMITGYVQNQQVDIARKLFEVMPEKN-EVSWTAMLKGYTNCGRLDEA-- 334
Query: 246 GRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQ 305
++L V + +I + + GE+ K + +FD KD W+++I Y +
Sbjct: 335 -----SELFNAMPIKSVVACNAMILCFGQNGEVPKARQVFDQMREKDEGTWSAMIKVYER 389
Query: 306 YGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESM-KSKYLVEPKT 364
GL +L++F M G+ P+ +L+ VLS C+ + GREI + +S++ ++
Sbjct: 390 KGLELDALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYV 449
Query: 365 EHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTH 409
+ ++ + + G + A ++ + + D ++W S++ H
Sbjct: 450 A--SVLLSMYIKCGNLAKAKQVFDRFAVK-DVVMWNSIITGYAQH 491
Score = 46.2 bits (108), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 85/210 (40%), Gaps = 39/210 (18%)
Query: 282 KLIFDNF-ASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMP-------------- 326
+L+ + F S I+ NS+I+ Y++ G EK+ VF EM ++
Sbjct: 86 RLVLNRFYCSNFIISRNSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRP 145
Query: 327 -------------DDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDL 373
+ ++ G++S G + E RE+F+ M + +V + MV
Sbjct: 146 QEAQNMFDKMSERNTISWNGLVSGYINNGMINEAREVFDRMPERNVVS-----WTAMVRG 200
Query: 374 LGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEP-KNAGP 432
+ G + +A L MP E + + W +LG ++D A +L + P K+
Sbjct: 201 YVKEGMISEAETLFWQMP-EKNVVSWTVMLGGLLQEGRID----EACRLFDMMPEKDVVT 255
Query: 433 YILLSNIYASQGRFHDVAELRKNMRKRNVI 462
+ Y GR + L M +RNV+
Sbjct: 256 RTNMIGGYCQVGRLVEARMLFDEMPRRNVV 285
>gi|356530157|ref|XP_003533650.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Glycine max]
Length = 711
Score = 962 bits (2486), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/600 (74%), Positives = 518/600 (86%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MP+RNVVSWT+MVRGYV G + EA LFW MP KNVVSWTVMLGG +++ R+DDAR+LF
Sbjct: 112 MPDRNVVSWTSMVRGYVRNGDVAEAERLFWHMPHKNVVSWTVMLGGLLQEGRVDDARKLF 171
Query: 61 DMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARK 120
DMMPEKDVVA TNM+ GYC++GR+DE R +FDEMPK+NV++WT M+SGY N ++DVARK
Sbjct: 172 DMMPEKDVVAVTNMIGGYCEEGRLDEARALFDEMPKRNVVTWTAMVSGYARNGKVDVARK 231
Query: 121 LFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKA 180
LFEVMPE+NEVSWTAML+GYT GR+++A LF AMP+K VV N MI+G G NGEV KA
Sbjct: 232 LFEVMPERNEVSWTAMLLGYTHSGRMREASSLFDAMPVKPVVVCNEMIMGFGLNGEVDKA 291
Query: 181 RVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASL 240
R VF M+E+D+ TWS MIKVYERKGYELE + LF MQ+EG+ +NFPSLISVLSVC SL
Sbjct: 292 RRVFKGMKERDNGTWSAMIKVYERKGYELEALGLFRRMQREGLALNFPSLISVLSVCVSL 351
Query: 241 ASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSII 300
ASLDHG+QVHAQLVR +FD D+YVASVLITMY+KCG LV+ K +F+ F KD+VMWNS+I
Sbjct: 352 ASLDHGKQVHAQLVRSEFDQDLYVASVLITMYVKCGNLVRAKQVFNRFPLKDVVMWNSMI 411
Query: 301 SGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLV 360
+GY+Q+GLGE++L VFH+M SSGV PDDVT +GVLSACSY+GKVKEG E+FE+MK KY V
Sbjct: 412 TGYSQHGLGEEALNVFHDMCSSGVPPDDVTFIGVLSACSYSGKVKEGLELFETMKCKYQV 471
Query: 361 EPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAK 420
EP EHYAC+VDLLGRA QV +AMKL+E MP EPDAI+WG+LLGACRTHMKLDLAEVA +
Sbjct: 472 EPGIEHYACLVDLLGRADQVNEAMKLVEKMPMEPDAIVWGALLGACRTHMKLDLAEVAVE 531
Query: 421 KLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFT 480
KL QLEPKNAGPY+LLSN+YA +GR+ DV LR+ ++ R+V K PGCSWIEVEKKVHMFT
Sbjct: 532 KLAQLEPKNAGPYVLLSNMYAYKGRWRDVEVLREKIKARSVTKLPGCSWIEVEKKVHMFT 591
Query: 481 GRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAY 540
G D HPE P+IM+MLEK+GGLLREAGYCPD SFVLHDVDEEEK HSL YHSEKLAVAY
Sbjct: 592 GGDSKGHPEQPIIMKMLEKLGGLLREAGYCPDGSFVLHDVDEEEKTHSLGYHSEKLAVAY 651
Query: 541 GLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
GL+K+PEG+PIRVMKNLRVCGDCHSAIKLI+KV GREIILRDANRFHHFKDG CSC+DYW
Sbjct: 652 GLLKVPEGMPIRVMKNLRVCGDCHSAIKLIAKVTGREIILRDANRFHHFKDGHCSCKDYW 711
Score = 168 bits (425), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 109/408 (26%), Positives = 195/408 (47%), Gaps = 47/408 (11%)
Query: 37 VVSWTVMLGGFIRDSRIDDARRLFD---------------------------------MM 63
S + + + R+ ++D AR++FD M
Sbjct: 22 TTSSSYAIACYARNGQLDHARKVFDETPLPHRTVSSWNAMVAAYFEARQPREALLLFEKM 81
Query: 64 PEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFE 123
P+++ V+ ++ G+ ++G + E R +FD MP +NV+SWT+M+ GYV N + A +LF
Sbjct: 82 PQRNTVSWNGLISGHIKNGMLSEARRVFDTMPDRNVVSWTSMVRGYVRNGDVAEAERLFW 141
Query: 124 VMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVV 183
MP KN VSWT ML G Q GR+ DA +LF MP K VVA +MI G + G + +AR +
Sbjct: 142 HMPHKNVVSWTVMLGGLLQEGRVDDARKLFDMMPEKDVVAVTNMIGGYCEEGRLDEARAL 201
Query: 184 FDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASL 243
FD+M +++ TW+ M+ Y R G LF +M + V++ +++ L
Sbjct: 202 FDEMPKRNVVTWTAMVSGYARNGKVDVARKLFEVMPERN-EVSWTAML--------LGYT 252
Query: 244 DHGRQVHAQLVRCQFDVD-VYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISG 302
GR A + V V V + +I + GE+ K + +F +D W+++I
Sbjct: 253 HSGRMREASSLFDAMPVKPVVVCNEMIMGFGLNGEVDKARRVFKGMKERDNGTWSAMIKV 312
Query: 303 YAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESM-KSKYLVE 361
Y + G ++L +F M G+ + +L+ VLS C + G+++ + +S++ +
Sbjct: 313 YERKGYELEALGLFRRMQREGLALNFPSLISVLSVCVSLASLDHGKQVHAQLVRSEF--D 370
Query: 362 PKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTH 409
+ ++ + + G + A ++ P + D ++W S++ H
Sbjct: 371 QDLYVASVLITMYVKCGNLVRAKQVFNRFPLK-DVVMWNSMITGYSQH 417
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 113/248 (45%), Gaps = 20/248 (8%)
Query: 158 MKSVVASNSMILGLGQNGEVQKARVVFDQ--MREKDDATWSGMIKVYERKGYELEVIDLF 215
++ +S+ I +NG++ AR VFD+ + + ++W+ M+ Y E + LF
Sbjct: 19 LQCTTSSSYAIACYARNGQLDHARKVFDETPLPHRTVSSWNAMVAAYFEARQPREALLLF 78
Query: 216 TLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKC 275
M + N S ++S L R+V + D +V + ++ Y++
Sbjct: 79 EKMPQR----NTVSWNGLISGHIKNGMLSEARRVFDTMP----DRNVVSWTSMVRGYVRN 130
Query: 276 GELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVL 335
G++ + + +F + K++V W ++ G Q G + + K+F M D V + ++
Sbjct: 131 GDVAEAERLFWHMPHKNVVSWTVMLGGLLQEGRVDDARKLFDMMPEK----DVVAVTNMI 186
Query: 336 SACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPD 395
G++ E R +F+ M + +V + MV R G+V+ A KL E MP E +
Sbjct: 187 GGYCEEGRLDEARALFDEMPKRNVVT-----WTAMVSGYARNGKVDVARKLFEVMP-ERN 240
Query: 396 AIIWGSLL 403
+ W ++L
Sbjct: 241 EVSWTAML 248
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 107/242 (44%), Gaps = 18/242 (7%)
Query: 223 VRVNFPSLISVLSVC-ASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKG 281
VR+ + S C A LDH R+V + V + A ++ Y + + +
Sbjct: 17 VRLQCTTSSSYAIACYARNGQLDHARKVFDETPLPHRTVSSWNA--MVAAYFEARQPREA 74
Query: 282 KLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYT 341
L+F+ ++ V WN +ISG+ + G+ ++ +VF M V V+ ++
Sbjct: 75 LLLFEKMPQRNTVSWNGLISGHIKNGMLSEARRVFDTMPDRNV----VSWTSMVRGYVRN 130
Query: 342 GKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGS 401
G V E +F M K +V + M+ L + G+V+DA KL + MP E D + +
Sbjct: 131 GDVAEAERLFWHMPHKNVVS-----WTVMLGGLLQEGRVDDARKLFDMMP-EKDVVAVTN 184
Query: 402 LLGACRTHMKLDLAEVAAKKLLQLEPK-NAGPYILLSNIYASQGRFHDVAELRKNMRKRN 460
++G +LD A+ L PK N + + + YA G+ +L + M +RN
Sbjct: 185 MIGGYCEEGRLD----EARALFDEMPKRNVVTWTAMVSGYARNGKVDVARKLFEVMPERN 240
Query: 461 VI 462
+
Sbjct: 241 EV 242
>gi|357506719|ref|XP_003623648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498663|gb|AES79866.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 707
Score = 945 bits (2443), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/600 (72%), Positives = 524/600 (87%), Gaps = 1/600 (0%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MPERNVVSWT+MVRGYV+EGM+ EA LFW+MP +NVVSWTVM+GG +++SRIDDA++LF
Sbjct: 109 MPERNVVSWTSMVRGYVQEGMVEEAEKLFWEMPRRNVVSWTVMIGGLLKESRIDDAKKLF 168
Query: 61 DMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARK 120
DM+PEKDVV TNM+ GYCQ GR+DE RE+FDEM +NV +WTTM+SGY N R+DVARK
Sbjct: 169 DMIPEKDVVVVTNMIGGYCQVGRLDEARELFDEMKVRNVFTWTTMVSGYAKNGRVDVARK 228
Query: 121 LFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKA 180
LFEVMPE+NEVSWTAMLMGYTQ GR+++A+ELF+AMP+K +VA N MIL G GE+ +A
Sbjct: 229 LFEVMPERNEVSWTAMLMGYTQSGRMKEAFELFEAMPVKWIVACNEMILQFGLAGEMHRA 288
Query: 181 RVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASL 240
R++F+ M+E+D+ TW+ MIKV+ERKG +LE + LF MQ+EGV +NFPS+ISVLSVCASL
Sbjct: 289 RMMFEGMKERDEGTWNAMIKVFERKGLDLEALGLFARMQREGVALNFPSMISVLSVCASL 348
Query: 241 ASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSII 300
ASLDHGRQVHA+LVR +FD D+YVASVLITMY+KCG+LV+ K IF+ F KD+VMWNS+I
Sbjct: 349 ASLDHGRQVHARLVRSEFDQDLYVASVLITMYVKCGDLVRAKGIFNRFLFKDVVMWNSMI 408
Query: 301 SGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLV 360
+GY+Q+GLGE++L VFH+M SSGV PD+VT +GVLSACSY+GKVKEG EIFE+MK Y V
Sbjct: 409 TGYSQHGLGEEALNVFHDMCSSGVQPDEVTFIGVLSACSYSGKVKEGFEIFEAMKCTYQV 468
Query: 361 EPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAK 420
EP EHYACMVDLLGRAG+V++AM+L+E MP EPDAI+WG+LLGACR HMKLDLAEVA +
Sbjct: 469 EPGIEHYACMVDLLGRAGRVDEAMELVEKMPMEPDAIVWGALLGACRNHMKLDLAEVAVE 528
Query: 421 KLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFT 480
KL +LEPKNAGPY+LLS++YA++GR+ DV LRK + +R VIK PGCSWIEVEKKVHMFT
Sbjct: 529 KLAKLEPKNAGPYVLLSHMYATKGRWRDVEVLRKKINRR-VIKFPGCSWIEVEKKVHMFT 587
Query: 481 GRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAY 540
G D SHPE MI +MLEK+ G LREAGYCPD SFVLHDVDEEEK HSL YHSE+LAVAY
Sbjct: 588 GGDSKSHPEQHMITQMLEKLSGFLREAGYCPDGSFVLHDVDEEEKTHSLGYHSERLAVAY 647
Query: 541 GLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
GL+K+PEG+PIRVMKNLRVCGDCHSAIKLI+KV GREIILRDANRFHHFKDG CSC+D+W
Sbjct: 648 GLLKVPEGMPIRVMKNLRVCGDCHSAIKLIAKVTGREIILRDANRFHHFKDGSCSCKDFW 707
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 111/416 (26%), Positives = 211/416 (50%), Gaps = 38/416 (9%)
Query: 25 AGTLFWQMPE-KNVVSWTVMLGGFIRDSRIDDARRLFDM--MPEKDVVAQTNMVLGYCQD 81
A TL +M + +++ S T + + R I +AR++FD +P++ + + MV Y +
Sbjct: 6 AATLRCRMVQARSLCSNTSAISRYGRIGDIHNARKVFDNTPLPQRTIASWNAMVSAYFES 65
Query: 82 GRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYT 141
+ + +FD+MP++N +S+ MISGYV N + ARK+F+VMPE+N VSWT+M+ GY
Sbjct: 66 HKPRDALLLFDQMPQRNTVSFNGMISGYVKNGMVADARKVFDVMPERNVVSWTSMVRGYV 125
Query: 142 QCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKV 201
Q G +++A +LF MP ++VV+ MI GL + + A+ +FD + EKD + MI
Sbjct: 126 QEGMVEEAEKLFWEMPRRNVVSWTVMIGGLLKESRIDDAKKLFDMIPEKDVVVVTNMIGG 185
Query: 202 YERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQV------------ 249
Y + G E +LF M+ VR N + +++S A +D R++
Sbjct: 186 YCQVGRLDEARELFDEMK---VR-NVFTWTTMVSGYAKNGRVDVARKLFEVMPERNEVSW 241
Query: 250 ------HAQLVRCQFDVDVYVA---------SVLITMYIKCGELVKGKLIFDNFASKDIV 294
+ Q R + +++ A + +I + GE+ + +++F+ +D
Sbjct: 242 TAMLMGYTQSGRMKEAFELFEAMPVKWIVACNEMILQFGLAGEMHRARMMFEGMKERDEG 301
Query: 295 MWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESM 354
WN++I + + GL ++L +F M GV + +++ VLS C+ + GR++ +
Sbjct: 302 TWNAMIKVFERKGLDLEALGLFARMQREGVALNFPSMISVLSVCASLASLDHGRQVHARL 361
Query: 355 -KSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTH 409
+S++ + + ++ + + G + A + F+ D ++W S++ H
Sbjct: 362 VRSEF--DQDLYVASVLITMYVKCGDLVRAKGIFNRFLFK-DVVMWNSMITGYSQH 414
>gi|297848224|ref|XP_002891993.1| hypothetical protein ARALYDRAFT_337864 [Arabidopsis lyrata subsp.
lyrata]
gi|297337835|gb|EFH68252.1| hypothetical protein ARALYDRAFT_337864 [Arabidopsis lyrata subsp.
lyrata]
Length = 950
Score = 924 bits (2388), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 432/599 (72%), Positives = 509/599 (84%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MPERNVVSWTAMV+GYV+EGM+ EA LFW+MPE+N VSWTVM GG I RIDDAR+L+
Sbjct: 105 MPERNVVSWTAMVKGYVQEGMVVEAELLFWRMPERNEVSWTVMFGGLIDGGRIDDARKLY 164
Query: 61 DMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARK 120
DMMP KDVVA TNM+ G C++GRVDE REIFDEM ++NVI+WTTMI+GY N R+DVARK
Sbjct: 165 DMMPGKDVVASTNMIGGLCREGRVDEAREIFDEMRERNVITWTTMITGYGQNKRVDVARK 224
Query: 121 LFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKA 180
LFEVMPEK EVSWT+ML+GYT GRI+DA E F+ MPMK V+A N+MI+ LG+ GE+ KA
Sbjct: 225 LFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVALGEVGEIVKA 284
Query: 181 RVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASL 240
R VFDQM ++D+ATW GMIK YERKG+ELE ++LF MQ++GVR +FPSLIS+LSVCA+L
Sbjct: 285 RRVFDQMEDRDNATWRGMIKAYERKGFELEALELFAQMQRQGVRPSFPSLISILSVCATL 344
Query: 241 ASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSII 300
ASL +GRQVHA LVRCQFD DVYVASVL+TMY+KCGELVK KL+FD F SKDI+MWNSII
Sbjct: 345 ASLQYGRQVHAHLVRCQFDGDVYVASVLMTMYVKCGELVKAKLVFDRFPSKDIIMWNSII 404
Query: 301 SGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLV 360
SGYA +GLGE++LKVFHEM SG MP+ VTL+ +L+ACSY GK++EG EIFESM+SK+ V
Sbjct: 405 SGYASHGLGEEALKVFHEMPLSGTMPNKVTLIAILTACSYGGKLEEGLEIFESMESKFCV 464
Query: 361 EPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAK 420
P EHY+C VD+LGRAG+V+ AM+LI +M +PDA +WG+LLGAC+TH +LDLAEVAAK
Sbjct: 465 TPTVEHYSCTVDMLGRAGKVDKAMELINSMTIKPDATVWGALLGACKTHSRLDLAEVAAK 524
Query: 421 KLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFT 480
KL ++EP+NAGPYILLS+I AS+ ++ DVAE+RKNMR +NV K PGCSWIEV KKVHMFT
Sbjct: 525 KLFEIEPENAGPYILLSSINASRSKWGDVAEMRKNMRTKNVSKFPGCSWIEVGKKVHMFT 584
Query: 481 GRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAY 540
+HPE MI+ MLEK GLLREAGY PD S VLHDVDEEEKV SL HSE+LAVAY
Sbjct: 585 RGGIRNHPEQAMILMMLEKTDGLLREAGYSPDCSHVLHDVDEEEKVDSLSRHSERLAVAY 644
Query: 541 GLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDY 599
GL+KLPEGVPIRVMKNLRVCGDCH+AIKLISKV REIILRDANRFHHF +G CSCRDY
Sbjct: 645 GLLKLPEGVPIRVMKNLRVCGDCHAAIKLISKVTEREIILRDANRFHHFNNGECSCRDY 703
Score = 208 bits (529), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 129/449 (28%), Positives = 225/449 (50%), Gaps = 17/449 (3%)
Query: 20 GMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYC 79
G I EA F + K + SW ++ G+ + +AR++FD MPE+++V+ +V GY
Sbjct: 31 GQINEARKFFDSLRYKAIGSWNSIVSGYFANGLPREARQMFDEMPERNIVSWNGLVSGYI 90
Query: 80 QDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMG 139
++ ++E R +F+ MP++NV+SWT M+ GYV + A LF MPE+NEVSWT M G
Sbjct: 91 KNRMIEEARNVFEIMPERNVVSWTAMVKGYVQEGMVVEAELLFWRMPERNEVSWTVMFGG 150
Query: 140 YTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMI 199
GRI DA +L+ MP K VVAS +MI GL + G V +AR +FD+MRE++ TW+ MI
Sbjct: 151 LIDGGRIDDARKLYDMMPGKDVVASTNMIGGLCREGRVDEAREIFDEMRERNVITWTTMI 210
Query: 200 KVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFD 259
Y + LF +M E V++ S++ ++ + + +V
Sbjct: 211 TGYGQNKRVDVARKLFEVM-PEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPM------- 262
Query: 260 VDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEM 319
V + +I + GE+VK + +FD +D W +I Y + G ++L++F +M
Sbjct: 263 KPVIACNAMIVALGEVGEIVKARRVFDQMEDRDNATWRGMIKAYERKGFELEALELFAQM 322
Query: 320 FSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQ 379
GV P +L+ +LS C+ ++ GR++ + + + + ++ + + G+
Sbjct: 323 QRQGVRPSFPSLISILSVCATLASLQYGRQVHAHL-VRCQFDGDVYVASVLMTMYVKCGE 381
Query: 380 VEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGP----YIL 435
+ A + + P D I+W S++ +H L E A K ++ P I
Sbjct: 382 LVKAKLVFDRFP-SKDIIMWNSIISGYASH---GLGEEALKVFHEMPLSGTMPNKVTLIA 437
Query: 436 LSNIYASQGRFHDVAELRKNMRKRNVIKP 464
+ + G+ + E+ ++M + + P
Sbjct: 438 ILTACSYGGKLEEGLEIFESMESKFCVTP 466
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/338 (23%), Positives = 161/338 (47%), Gaps = 34/338 (10%)
Query: 141 TQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIK 200
++ G+I +A + F ++ K++ + NS++ G NG ++AR +FD+M E++ +W+G++
Sbjct: 28 SRIGQINEARKFFDSLRYKAIGSWNSIVSGYFANGLPREARQMFDEMPERNIVSWNGLVS 87
Query: 201 VYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDV 260
Y + E ++F +M + V V++ +++ + G V A+L+ +
Sbjct: 88 GYIKNRMIEEARNVFEIMPERNV-VSWTAMVK--------GYVQEGMVVEAELLFWRMPE 138
Query: 261 DVYVA-SVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEM 319
V+ +V+ I G + + ++D KD+V ++I G + G +++ ++F EM
Sbjct: 139 RNEVSWTVMFGGLIDGGRIDDARKLYDMMPGKDVVASTNMIGGLCREGRVDEAREIFDEM 198
Query: 320 FSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQ 379
V +T +++ +V R++FE M K V + M+ +G+
Sbjct: 199 RERNV----ITWTTMITGYGQNKRVDVARKLFEVMPEKTEVS-----WTSMLLGYTLSGR 249
Query: 380 VEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVA----AKKLL-QLEPKNAGPYI 434
+EDA + E MP +P + AC M + L EV A+++ Q+E ++ +
Sbjct: 250 IEDAEEFFEVMPMKP--------VIACNA-MIVALGEVGEIVKARRVFDQMEDRDNATWR 300
Query: 435 LLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEV 472
+ Y +G + EL M+++ V +P S I +
Sbjct: 301 GMIKAYERKGFELEALELFAQMQRQGV-RPSFPSLISI 337
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 116/258 (44%), Gaps = 30/258 (11%)
Query: 152 LFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEV 211
L +A + V ++ I L + G++ +AR FD +R K +W+ ++ Y G E
Sbjct: 8 LHRAYSTSTGVNNSFEISRLSRIGQINEARKFFDSLRYKAIGSWNSIVSGYFANGLPREA 67
Query: 212 IDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDV----DVYVASV 267
+F M + + V++ L+S + + + R F++ +V +
Sbjct: 68 RQMFDEMPERNI-VSWNGLVS-----------GYIKNRMIEEARNVFEIMPERNVVSWTA 115
Query: 268 LITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMP- 326
++ Y++ G +V+ +L+F ++ V W + G G + + K++ +MP
Sbjct: 116 MVKGYVQEGMVVEAELLFWRMPERNEVSWTVMFGGLIDGGRIDDARKLYD------MMPG 169
Query: 327 -DDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMK 385
D V ++ G+V E REIF+ M+ + ++ + M+ G+ +V+ A K
Sbjct: 170 KDVVASTNMIGGLCREGRVDEAREIFDEMRERNVIT-----WTTMITGYGQNKRVDVARK 224
Query: 386 LIEAMPFEPDAIIWGSLL 403
L E MP E + W S+L
Sbjct: 225 LFEVMP-EKTEVSWTSML 241
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 91/198 (45%), Gaps = 15/198 (7%)
Query: 266 SVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVM 325
S I+ + G++ + + FD+ K I WNSI+SGY GL ++ ++F EM +
Sbjct: 21 SFEISRLSRIGQINEARKFFDSLRYKAIGSWNSIVSGYFANGLPREARQMFDEMPERNI- 79
Query: 326 PDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMK 385
V+ G++S ++E R +FE M + +V + MV + G V +A
Sbjct: 80 ---VSWNGLVSGYIKNRMIEEARNVFEIMPERNVVS-----WTAMVKGYVQEGMVVEAEL 131
Query: 386 LIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEP-KNAGPYILLSNIYASQG 444
L MP E + + W + G ++D A+KL + P K+ + +G
Sbjct: 132 LFWRMP-ERNEVSWTVMFGGLIDGGRID----DARKLYDMMPGKDVVASTNMIGGLCREG 186
Query: 445 RFHDVAELRKNMRKRNVI 462
R + E+ MR+RNVI
Sbjct: 187 RVDEAREIFDEMRERNVI 204
>gi|15223594|ref|NP_176062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75173061|sp|Q9FXB9.1|PPR84_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g56690, mitochondrial; Flags: Precursor
gi|9954744|gb|AAG09095.1|AC009323_6 Hypothetical protein [Arabidopsis thaliana]
gi|332195302|gb|AEE33423.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 704
Score = 922 bits (2384), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/600 (71%), Positives = 508/600 (84%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MPERNVVSWTAMV+GY++EGM+ EA +LFW+MPE+N VSWTVM GG I D RID AR+L+
Sbjct: 105 MPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMFGGLIDDGRIDKARKLY 164
Query: 61 DMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARK 120
DMMP KDVVA TNM+ G C++GRVDE R IFDEM ++NV++WTTMI+GY NNR+DVARK
Sbjct: 165 DMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARK 224
Query: 121 LFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKA 180
LFEVMPEK EVSWT+ML+GYT GRI+DA E F+ MPMK V+A N+MI+G G+ GE+ KA
Sbjct: 225 LFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVGEISKA 284
Query: 181 RVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASL 240
R VFD M ++D+ATW GMIK YERKG+ELE +DLF MQK+GVR +FPSLIS+LSVCA+L
Sbjct: 285 RRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATL 344
Query: 241 ASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSII 300
ASL +GRQVHA LVRCQFD DVYVASVL+TMY+KCGELVK KL+FD F+SKDI+MWNSII
Sbjct: 345 ASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSII 404
Query: 301 SGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLV 360
SGYA +GLGE++LK+FHEM SSG MP+ VTL+ +L+ACSY GK++EG EIFESM+SK+ V
Sbjct: 405 SGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCV 464
Query: 361 EPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAK 420
P EHY+C VD+LGRAGQV+ AM+LIE+M +PDA +WG+LLGAC+TH +LDLAEVAAK
Sbjct: 465 TPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSRLDLAEVAAK 524
Query: 421 KLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFT 480
KL + EP NAG Y+LLS+I AS+ ++ DVA +RKNMR NV K PGCSWIEV KKVHMFT
Sbjct: 525 KLFENEPDNAGTYVLLSSINASRSKWGDVAVVRKNMRTNNVSKFPGCSWIEVGKKVHMFT 584
Query: 481 GRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAY 540
+HPE MI+ MLEK GLLREAGY PD S VLHDVDEEEKV SL HSE+LAVAY
Sbjct: 585 RGGIKNHPEQAMILMMLEKTDGLLREAGYSPDCSHVLHDVDEEEKVDSLSRHSERLAVAY 644
Query: 541 GLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
GL+KLPEGVPIRVMKNLRVCGDCH+AIKLISKV REIILRDANRFHHF +G CSCRDYW
Sbjct: 645 GLLKLPEGVPIRVMKNLRVCGDCHAAIKLISKVTEREIILRDANRFHHFNNGECSCRDYW 704
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 131/451 (29%), Positives = 225/451 (49%), Gaps = 21/451 (4%)
Query: 20 GMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYC 79
G I EA F + K + SW ++ G+ + +AR+LFD M E++VV+ +V GY
Sbjct: 31 GKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVSGYI 90
Query: 80 QDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMG 139
++ + E R +F+ MP++NV+SWT M+ GY+ + A LF MPE+NEVSWT M G
Sbjct: 91 KNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMFGG 150
Query: 140 YTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMI 199
GRI A +L+ MP+K VVAS +MI GL + G V +AR++FD+MRE++ TW+ MI
Sbjct: 151 LIDDGRIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMI 210
Query: 200 KVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFD 259
Y + LF +M E V++ S++ ++ + + +V
Sbjct: 211 TGYRQNNRVDVARKLFEVM-PEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPM------- 262
Query: 260 VDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEM 319
V + +I + + GE+ K + +FD +D W +I Y + G ++L +F +M
Sbjct: 263 KPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQM 322
Query: 320 FSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQ 379
GV P +L+ +LS C+ ++ GR++ + + + + ++ + + G+
Sbjct: 323 QKQGVRPSFPSLISILSVCATLASLQYGRQVHAHL-VRCQFDDDVYVASVLMTMYVKCGE 381
Query: 380 VEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGP------Y 433
+ A KL+ D I+W S++ +H L E A K ++ P
Sbjct: 382 LVKA-KLVFDRFSSKDIIMWNSIISGYASH---GLGEEALKIFHEMPSSGTMPNKVTLIA 437
Query: 434 ILLSNIYASQGRFHDVAELRKNMRKRNVIKP 464
IL + YA G+ + E+ ++M + + P
Sbjct: 438 ILTACSYA--GKLEEGLEIFESMESKFCVTP 466
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 143/293 (48%), Gaps = 43/293 (14%)
Query: 141 TQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIK 200
++ G+I +A + F ++ K++ + NS++ G NG ++AR +FD+M E++ +W+G++
Sbjct: 28 SRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVS 87
Query: 201 VYERKGYELEVIDLFTLMQKEGVRVNFPSLI------SVLSVCASL-------------- 240
Y + +E ++F LM + V V++ +++ ++ SL
Sbjct: 88 GYIKNRMIVEARNVFELMPERNV-VSWTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTV 146
Query: 241 ---ASLDHGRQVHAQLVRCQFDV-DVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMW 296
+D GR A+ + V DV ++ +I + G + + +LIFD +++V W
Sbjct: 147 MFGGLIDDGRIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTW 206
Query: 297 NSIISGYAQYGLGEKSLKVFHEMFSSGVMPD--DVTLVGVLSACSYTGKVKEGREIFESM 354
++I+GY Q + + K+F VMP+ +V+ +L + +G++++ E FE M
Sbjct: 207 TTMITGYRQNNRVDVARKLFE------VMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVM 260
Query: 355 KSKYLVEPKTEHYAC--MVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
K ++ AC M+ G G++ A ++ + M + D W ++ A
Sbjct: 261 PMKPVI-------ACNAMIVGFGEVGEISKARRVFDLME-DRDNATWRGMIKA 305
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/293 (21%), Positives = 124/293 (42%), Gaps = 54/293 (18%)
Query: 171 LGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSL 230
L + G++ +AR FD ++ K +W+ ++ Y G E LF M + V V++ L
Sbjct: 27 LSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNV-VSWNGL 85
Query: 231 ISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFAS 290
+S YIK +V+ + +F+
Sbjct: 86 VS--------------------------------------GYIKNRMIVEARNVFELMPE 107
Query: 291 KDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREI 350
+++V W +++ GY Q G+ ++ +F M + V G++ G++ + R++
Sbjct: 108 RNVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMFGGLID----DGRIDKARKL 163
Query: 351 FESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHM 410
++ M K +V M+ L R G+V++A + + M E + + W +++ R +
Sbjct: 164 YDMMPVKDVVASTN-----MIGGLCREGRVDEARLIFDEMR-ERNVVTWTTMITGYRQNN 217
Query: 411 KLDLAEVAAKKLLQLEP-KNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVI 462
++D+ A+KL ++ P K + + Y GR D E + M + VI
Sbjct: 218 RVDV----ARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVI 266
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 93/210 (44%), Gaps = 24/210 (11%)
Query: 254 VRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSL 313
V C F+ I+ + G++ + + FD+ K I WNSI+SGY GL +++
Sbjct: 18 VNCSFE---------ISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEAR 68
Query: 314 KVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDL 373
++F EM V V+ G++S + E R +FE M + +V + MV
Sbjct: 69 QLFDEMSERNV----VSWNGLVSGYIKNRMIVEARNVFELMPERNVVS-----WTAMVKG 119
Query: 374 LGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEP-KNAGP 432
+ G V +A L MP E + + W + G ++D A+KL + P K+
Sbjct: 120 YMQEGMVGEAESLFWRMP-ERNEVSWTVMFGGLIDDGRID----KARKLYDMMPVKDVVA 174
Query: 433 YILLSNIYASQGRFHDVAELRKNMRKRNVI 462
+ +GR + + MR+RNV+
Sbjct: 175 STNMIGGLCREGRVDEARLIFDEMRERNVV 204
>gi|15217508|ref|NP_172412.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806401|sp|Q56XI1.2|PPR25_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09410
gi|3482916|gb|AAC33201.1| Hypothetical protein [Arabidopsis thaliana]
gi|91805759|gb|ABE65608.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332190317|gb|AEE28438.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 705
Score = 882 bits (2278), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/601 (68%), Positives = 506/601 (84%), Gaps = 1/601 (0%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MPERNVVSWTA+V+GYV G + A +LFW+MPEKN VSWTVML GF++D RIDDA +L+
Sbjct: 105 MPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLY 164
Query: 61 DMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARK 120
+M+P+KD +A+T+M+ G C++GRVDE REIFDEM +++VI+WTTM++GY NNR+D ARK
Sbjct: 165 EMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARK 224
Query: 121 LFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKA 180
+F+VMPEK EVSWT+MLMGY Q GRI+DA ELF+ MP+K V+A N+MI GLGQ GE+ KA
Sbjct: 225 IFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVMPVKPVIACNAMISGLGQKGEIAKA 284
Query: 181 RVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASL 240
R VFD M+E++DA+W +IK++ER G+ELE +DLF LMQK+GVR FP+LIS+LSVCASL
Sbjct: 285 RRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASL 344
Query: 241 ASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSII 300
ASL HG+QVHAQLVRCQFDVDVYVASVL+TMYIKCGELVK KLIFD F SKDI+MWNSII
Sbjct: 345 ASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSII 404
Query: 301 SGYAQYGLGEKSLKVFHEM-FSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYL 359
SGYA +GLGE++LKVF EM S P++VT V LSACSY G V+EG +I+ESM+S +
Sbjct: 405 SGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFG 464
Query: 360 VEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAA 419
V+P T HYACMVD+LGRAG+ +AM++I++M EPDA +WGSLLGACRTH +LD+AE A
Sbjct: 465 VKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCA 524
Query: 420 KKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMF 479
KKL+++EP+N+G YILLSN+YASQGR+ DVAELRK M+ R V K PGCSW EVE KVH F
Sbjct: 525 KKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLMKTRLVRKSPGCSWTEVENKVHAF 584
Query: 480 TGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVA 539
T SHPE I+++L+++ GLLREAGY PD S+ LHDVDEEEKV+SL+YHSE+LAVA
Sbjct: 585 TRGGINSHPEQESILKILDELDGLLREAGYNPDCSYALHDVDEEEKVNSLKYHSERLAVA 644
Query: 540 YGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDY 599
Y L+KL EG+PIRVMKNLRVC DCH+AIK+ISKV REIILRDANRFHHF++G CSC+DY
Sbjct: 645 YALLKLSEGIPIRVMKNLRVCSDCHTAIKIISKVKEREIILRDANRFHHFRNGECSCKDY 704
Query: 600 W 600
W
Sbjct: 705 W 705
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 123/395 (31%), Positives = 221/395 (55%), Gaps = 20/395 (5%)
Query: 20 GMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYC 79
G I EA LF K++ SW M+ G+ + DAR+LFD MP++++++ +V GY
Sbjct: 31 GKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRNIISWNGLVSGYM 90
Query: 80 QDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMG 139
++G +DE R++FD MP++NV+SWT ++ GYV+N ++DVA LF MPEKN+VSWT ML+G
Sbjct: 91 KNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKVSWTVMLIG 150
Query: 140 YTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMI 199
+ Q GRI DA +L++ +P K +A SMI GL + G V +AR +FD+M E+ TW+ M+
Sbjct: 151 FLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMV 210
Query: 200 KVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFD 259
Y + + +F +M E V++ S++ + + +GR A+ + F+
Sbjct: 211 TGYGQNNRVDDARKIFDVM-PEKTEVSWTSML--------MGYVQNGRIEDAEEL---FE 258
Query: 260 V----DVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKV 315
V V + +I+ + GE+ K + +FD+ ++ W ++I + + G ++L +
Sbjct: 259 VMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDL 318
Query: 316 FHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESM-KSKYLVEPKTEHYACMVDLL 374
F M GV P TL+ +LS C+ + G+++ + + ++ V+ + ++ +
Sbjct: 319 FILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVA--SVLMTMY 376
Query: 375 GRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTH 409
+ G++ + + + P D I+W S++ +H
Sbjct: 377 IKCGELVKSKLIFDRFP-SKDIIMWNSIISGYASH 410
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 134/284 (47%), Gaps = 42/284 (14%)
Query: 141 TQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIK 200
++ G+I +A +LF + KS+ + NSM+ G N + AR +FD+M +++ +W+G++
Sbjct: 28 SRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRNIISWNGLVS 87
Query: 201 VYERKGYELEVIDLFTLMQKEGVRVNFPSLI------SVLSVCASL-------------- 240
Y + G E +F LM + V V++ +L+ + V SL
Sbjct: 88 GYMKNGEIDEARKVFDLMPERNV-VSWTALVKGYVHNGKVDVAESLFWKMPEKNKVSWTV 146
Query: 241 ---ASLDHGRQVHA-QLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMW 296
L GR A +L D D + +I K G + + + IFD + + ++ W
Sbjct: 147 MLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITW 206
Query: 297 NSIISGYAQYGLGEKSLKVFHEMFSSGVMPD--DVTLVGVLSACSYTGKVKEGREIFESM 354
++++GY Q + + K+F VMP+ +V+ +L G++++ E+FE M
Sbjct: 207 TTMVTGYGQNNRVDDARKIF------DVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVM 260
Query: 355 KSKYLVEPKTEHYAC--MVDLLGRAGQVEDAMKLIEAMPFEPDA 396
K ++ AC M+ LG+ G++ A ++ ++M DA
Sbjct: 261 PVKPVI-------ACNAMISGLGQKGEIAKARRVFDSMKERNDA 297
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 138/305 (45%), Gaps = 35/305 (11%)
Query: 163 ASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEG 222
+N I L + G++ +AR +FD K ++W+ M+ Y + LF M
Sbjct: 19 TANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDR- 77
Query: 223 VRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDV----DVYVASVLITMYIKCGEL 278
N S ++S +D R+V FD+ +V + L+ Y+ G++
Sbjct: 78 ---NIISWNGLVSGYMKNGEIDEARKV--------FDLMPERNVVSWTALVKGYVHNGKV 126
Query: 279 VKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSAC 338
+ +F K+ V W ++ G+ Q G + + K++ EM D++ ++
Sbjct: 127 DVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLY-EMIPD---KDNIARTSMIHGL 182
Query: 339 SYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAII 398
G+V E REIF+ M + ++ + MV G+ +V+DA K+ + MP E +
Sbjct: 183 CKEGRVDEAREIFDEMSERSVIT-----WTTMVTGYGQNNRVDDARKIFDVMP-EKTEVS 236
Query: 399 WGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRK---N 455
W S+L + +++ AE +L ++ P P I + + + G+ ++A+ R+ +
Sbjct: 237 WTSMLMGYVQNGRIEDAE----ELFEVMP--VKPVIACNAMISGLGQKGEIAKARRVFDS 290
Query: 456 MRKRN 460
M++RN
Sbjct: 291 MKERN 295
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 95/200 (47%), Gaps = 15/200 (7%)
Query: 264 VASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSG 323
A+V IT + G++ + + +FD+ SK I WNS+++GY + + K+F EM
Sbjct: 19 TANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRN 78
Query: 324 VMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDA 383
+ ++ G++S G++ E R++F+ M + +V + +V G+V+ A
Sbjct: 79 I----ISWNGLVSGYMKNGEIDEARKVFDLMPERNVVS-----WTALVKGYVHNGKVDVA 129
Query: 384 MKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEP-KNAGPYILLSNIYAS 442
L MP E + + W +L ++D A KL ++ P K+ + +
Sbjct: 130 ESLFWKMP-EKNKVSWTVMLIGFLQDGRID----DACKLYEMIPDKDNIARTSMIHGLCK 184
Query: 443 QGRFHDVAELRKNMRKRNVI 462
+GR + E+ M +R+VI
Sbjct: 185 EGRVDEAREIFDEMSERSVI 204
>gi|125543632|gb|EAY89771.1| hypothetical protein OsI_11313 [Oryza sativa Indica Group]
Length = 798
Score = 831 bits (2146), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/596 (62%), Positives = 476/596 (79%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMP 64
+VVS+T+++RGYV G++ +A LF QMPE+N VS+TV+LGG + R+++ARRLFD MP
Sbjct: 111 SVVSFTSLLRGYVRHGLLADAIRLFQQMPERNHVSYTVLLGGLLDAGRVNEARRLFDEMP 170
Query: 65 EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEV 124
++DVVA T M+ GYCQ GR+ E R +FDEMPK+NV+SWT MISGY N +++ARKLFEV
Sbjct: 171 DRDVVAWTAMLSGYCQAGRITEARALFDEMPKRNVVSWTAMISGYAQNGEVNLARKLFEV 230
Query: 125 MPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVF 184
MPE+NEVSWTAML+GY Q G ++DA ELF AMP V A N+M++G GQ G V A+ VF
Sbjct: 231 MPERNEVSWTAMLVGYIQAGHVEDAAELFNAMPEHPVAACNAMMVGFGQRGMVDAAKTVF 290
Query: 185 DQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLD 244
++MRE+DD TWS MIK YE+ + +E + F M GVR N+PS+IS+L+VCA+LA LD
Sbjct: 291 EKMRERDDGTWSAMIKAYEQNEFLMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLD 350
Query: 245 HGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYA 304
+GR+VHA ++RC FD+DV+ S LITMYIKCG L K K +F F KDIVMWNS+I+GYA
Sbjct: 351 YGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMWNSMITGYA 410
Query: 305 QYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKT 364
Q+GLGE++L +FH+M +G+ PD +T +G L+ACSYTGKVKEGREIF SM + P
Sbjct: 411 QHGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREIFNSMTVNSSIRPGA 470
Query: 365 EHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQ 424
EHY+CMVDLLGR+G VE+A LI+ MP EPDA+IWG+L+GACR H ++AEVAAKKLL+
Sbjct: 471 EHYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGACRMHRNAEIAEVAAKKLLE 530
Query: 425 LEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDC 484
LEP NAGPY+LLS+IY S GR+ D +++RK + RN+ K PGCSWIE +K+VH+FT D
Sbjct: 531 LEPGNAGPYVLLSHIYTSVGRWEDASKMRKFISSRNLNKSPGCSWIEYDKRVHLFTSGDV 590
Query: 485 VSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVK 544
++HPEH I+R+LEK+ GLL E+GY D SFVLHD+DEE+K HSLRYHSE+ AVAYGL+K
Sbjct: 591 LAHPEHAAILRILEKLDGLLMESGYSADGSFVLHDIDEEQKSHSLRYHSERQAVAYGLLK 650
Query: 545 LPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
+PEG+PIRVMKNLRVCGDCHSAIKLI+K+ REI+LRDANRFHHFKDG CSCRDYW
Sbjct: 651 IPEGMPIRVMKNLRVCGDCHSAIKLIAKITSREIVLRDANRFHHFKDGFCSCRDYW 706
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 95/397 (23%), Positives = 178/397 (44%), Gaps = 49/397 (12%)
Query: 49 RDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKN---------- 98
R I+ AR F+ MP + + ++ GY ++ D +F MP ++
Sbjct: 29 RAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLASYNALISG 88
Query: 99 -----------------------VISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTA 135
V+S+T+++ GYV + + A +LF+ MPE+N VS+T
Sbjct: 89 LSLRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQMPERNHVSYTV 148
Query: 136 MLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATW 195
+L G GR+ +A LF MP + VVA +M+ G Q G + +AR +FD+M +++ +W
Sbjct: 149 LLGGLLDAGRVNEARRLFDEMPDRDVVAWTAMLSGYCQAGRITEARALFDEMPKRNVVSW 208
Query: 196 SGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVH--AQL 253
+ MI Y + G LF +M + + +S A L V A+L
Sbjct: 209 TAMISGYAQNGEVNLARKLFEVMPER----------NEVSWTAMLVGYIQAGHVEDAAEL 258
Query: 254 VRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSL 313
+ V + ++ + + G + K +F+ +D W+++I Y Q ++L
Sbjct: 259 FNAMPEHPVAACNAMMVGFGQRGMVDAAKTVFEKMRERDDGTWSAMIKAYEQNEFLMEAL 318
Query: 314 KVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDL 373
F EM GV P+ +++ +L+ C+ + GRE+ +M + + + ++ +
Sbjct: 319 STFREMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAML-RCSFDMDVFAVSALITM 377
Query: 374 LGRAGQVEDAMKLIEAMPFEP-DAIIWGSLLGACRTH 409
+ G ++ A ++ FEP D ++W S++ H
Sbjct: 378 YIKCGNLDKAKRVFHT--FEPKDIVMWNSMITGYAQH 412
>gi|297722071|ref|NP_001173399.1| Os03g0317100 [Oryza sativa Japonica Group]
gi|255674461|dbj|BAH92127.1| Os03g0317100 [Oryza sativa Japonica Group]
Length = 706
Score = 828 bits (2139), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/596 (62%), Positives = 474/596 (79%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMP 64
+VVS+T+++RGYV G++ +A LF QMPE+N VS+TV+LGG + R+++ARRLFD MP
Sbjct: 111 SVVSFTSLLRGYVRHGLLADAIRLFQQMPERNHVSYTVLLGGLLDAGRVNEARRLFDEMP 170
Query: 65 EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEV 124
++DVVA T M+ GYCQ GR+ E R +FDEMPK+NV+SWT MISGY N +++ARKLFEV
Sbjct: 171 DRDVVAWTAMLSGYCQAGRITEARALFDEMPKRNVVSWTAMISGYAQNGEVNLARKLFEV 230
Query: 125 MPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVF 184
MPE+NEVSWTAML+GY Q G ++DA ELF AMP V A N+M++G GQ G V A+ VF
Sbjct: 231 MPERNEVSWTAMLVGYIQAGHVEDAAELFNAMPEHPVAACNAMMVGFGQRGMVDAAKTVF 290
Query: 185 DQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLD 244
++M E+DD TWS MIK YE+ + +E + F M GVR N+PS+IS+L+VCA+LA LD
Sbjct: 291 EKMCERDDGTWSAMIKAYEQNEFLMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLD 350
Query: 245 HGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYA 304
+GR+VHA ++RC FD+DV+ S LITMYIKCG L K K +F F KDIVMWNS+I+GYA
Sbjct: 351 YGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMWNSMITGYA 410
Query: 305 QYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKT 364
Q+GLGE++L +FH+M +G+ PD +T +G L+ACSYTGKVKEGREIF SM + P
Sbjct: 411 QHGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREIFNSMTVNSSIRPGA 470
Query: 365 EHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQ 424
EHY+CMVDLLGR+G VE+A LI+ MP EPDA+IWG+L+GACR H ++AE AAKKLL+
Sbjct: 471 EHYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGACRMHRNAEIAEFAAKKLLE 530
Query: 425 LEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDC 484
LEP NAGPY+LLS+IY S GR+ D +++RK + RN+ K PGCSWIE +K+VH+FT D
Sbjct: 531 LEPGNAGPYVLLSHIYTSVGRWEDASKMRKFISSRNLNKSPGCSWIEYDKRVHLFTSGDV 590
Query: 485 VSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVK 544
++HPEH I+R+LEK+ GLL E+GY D SFVLHD+DEE+K HSLRYHSE+ AVAYGL+K
Sbjct: 591 LAHPEHAAILRILEKLDGLLMESGYSADGSFVLHDIDEEQKSHSLRYHSERQAVAYGLLK 650
Query: 545 LPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
+PEG+PIRVMKNLRVCGDCHSAIKLI+K+ REIILRDANRFHHFKDG CSCRDYW
Sbjct: 651 IPEGMPIRVMKNLRVCGDCHSAIKLIAKITSREIILRDANRFHHFKDGFCSCRDYW 706
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 95/397 (23%), Positives = 178/397 (44%), Gaps = 49/397 (12%)
Query: 49 RDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKN---------- 98
R I+ AR F+ MP + + ++ GY ++ D +F MP ++
Sbjct: 29 RAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLASYNALISG 88
Query: 99 -----------------------VISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTA 135
V+S+T+++ GYV + + A +LF+ MPE+N VS+T
Sbjct: 89 LSLRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQMPERNHVSYTV 148
Query: 136 MLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATW 195
+L G GR+ +A LF MP + VVA +M+ G Q G + +AR +FD+M +++ +W
Sbjct: 149 LLGGLLDAGRVNEARRLFDEMPDRDVVAWTAMLSGYCQAGRITEARALFDEMPKRNVVSW 208
Query: 196 SGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVH--AQL 253
+ MI Y + G LF +M + + +S A L V A+L
Sbjct: 209 TAMISGYAQNGEVNLARKLFEVMPER----------NEVSWTAMLVGYIQAGHVEDAAEL 258
Query: 254 VRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSL 313
+ V + ++ + + G + K +F+ +D W+++I Y Q ++L
Sbjct: 259 FNAMPEHPVAACNAMMVGFGQRGMVDAAKTVFEKMCERDDGTWSAMIKAYEQNEFLMEAL 318
Query: 314 KVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDL 373
F EM GV P+ +++ +L+ C+ + GRE+ +M + + + ++ +
Sbjct: 319 STFREMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAML-RCSFDMDVFAVSALITM 377
Query: 374 LGRAGQVEDAMKLIEAMPFEP-DAIIWGSLLGACRTH 409
+ G ++ A ++ FEP D ++W S++ H
Sbjct: 378 YIKCGNLDKAKRVFHT--FEPKDIVMWNSMITGYAQH 412
>gi|108707831|gb|ABF95626.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125586055|gb|EAZ26719.1| hypothetical protein OsJ_10627 [Oryza sativa Japonica Group]
Length = 798
Score = 825 bits (2132), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/596 (62%), Positives = 474/596 (79%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMP 64
+VVS+T+++RGYV G++ +A LF QMPE+N VS+TV+LGG + R+++ARRLFD MP
Sbjct: 111 SVVSFTSLLRGYVRHGLLADAIRLFQQMPERNHVSYTVLLGGLLDAGRVNEARRLFDEMP 170
Query: 65 EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEV 124
++DVVA T M+ GYCQ GR+ E R +FDEMPK+NV+SWT MISGY N +++ARKLFEV
Sbjct: 171 DRDVVAWTAMLSGYCQAGRITEARALFDEMPKRNVVSWTAMISGYAQNGEVNLARKLFEV 230
Query: 125 MPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVF 184
MPE+NEVSWTAML+GY Q G ++DA ELF AMP V A N+M++G GQ G V A+ VF
Sbjct: 231 MPERNEVSWTAMLVGYIQAGHVEDAAELFNAMPEHPVAACNAMMVGFGQRGMVDAAKTVF 290
Query: 185 DQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLD 244
++M E+DD TWS MIK YE+ + +E + F M GVR N+PS+IS+L+VCA+LA LD
Sbjct: 291 EKMCERDDGTWSAMIKAYEQNEFLMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLD 350
Query: 245 HGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYA 304
+GR+VHA ++RC FD+DV+ S LITMYIKCG L K K +F F KDIVMWNS+I+GYA
Sbjct: 351 YGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMWNSMITGYA 410
Query: 305 QYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKT 364
Q+GLGE++L +FH+M +G+ PD +T +G L+ACSYTGKVKEGREIF SM + P
Sbjct: 411 QHGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREIFNSMTVNSSIRPGA 470
Query: 365 EHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQ 424
EHY+CMVDLLGR+G VE+A LI+ MP EPDA+IWG+L+GACR H ++AE AAKKLL+
Sbjct: 471 EHYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGACRMHRNAEIAEFAAKKLLE 530
Query: 425 LEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDC 484
LEP NAGPY+LLS+IY S GR+ D +++RK + RN+ K PGCSWIE +K+VH+FT D
Sbjct: 531 LEPGNAGPYVLLSHIYTSVGRWEDASKMRKFISSRNLNKSPGCSWIEYDKRVHLFTSGDV 590
Query: 485 VSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVK 544
++HPEH I+R+LEK+ GLL E+GY D SFVLHD+DEE+K HSLRYHSE+ AVAYGL+K
Sbjct: 591 LAHPEHAAILRILEKLDGLLMESGYSADGSFVLHDIDEEQKSHSLRYHSERQAVAYGLLK 650
Query: 545 LPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
+PEG+PIRVMKNLRVCGDCHSAIKLI+K+ REIILRDANRFHHFKDG CSCRDYW
Sbjct: 651 IPEGMPIRVMKNLRVCGDCHSAIKLIAKITSREIILRDANRFHHFKDGFCSCRDYW 706
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 95/397 (23%), Positives = 178/397 (44%), Gaps = 49/397 (12%)
Query: 49 RDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKN---------- 98
R I+ AR F+ MP + + ++ GY ++ D +F MP ++
Sbjct: 29 RAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLASYNALISG 88
Query: 99 -----------------------VISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTA 135
V+S+T+++ GYV + + A +LF+ MPE+N VS+T
Sbjct: 89 LSLRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQMPERNHVSYTV 148
Query: 136 MLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATW 195
+L G GR+ +A LF MP + VVA +M+ G Q G + +AR +FD+M +++ +W
Sbjct: 149 LLGGLLDAGRVNEARRLFDEMPDRDVVAWTAMLSGYCQAGRITEARALFDEMPKRNVVSW 208
Query: 196 SGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVH--AQL 253
+ MI Y + G LF +M + + +S A L V A+L
Sbjct: 209 TAMISGYAQNGEVNLARKLFEVMPER----------NEVSWTAMLVGYIQAGHVEDAAEL 258
Query: 254 VRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSL 313
+ V + ++ + + G + K +F+ +D W+++I Y Q ++L
Sbjct: 259 FNAMPEHPVAACNAMMVGFGQRGMVDAAKTVFEKMCERDDGTWSAMIKAYEQNEFLMEAL 318
Query: 314 KVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDL 373
F EM GV P+ +++ +L+ C+ + GRE+ +M + + + ++ +
Sbjct: 319 STFREMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAML-RCSFDMDVFAVSALITM 377
Query: 374 LGRAGQVEDAMKLIEAMPFEP-DAIIWGSLLGACRTH 409
+ G ++ A ++ FEP D ++W S++ H
Sbjct: 378 YIKCGNLDKAKRVFHT--FEPKDIVMWNSMITGYAQH 412
>gi|224124578|ref|XP_002330058.1| predicted protein [Populus trichocarpa]
gi|222871483|gb|EEF08614.1| predicted protein [Populus trichocarpa]
Length = 568
Score = 816 bits (2107), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/568 (67%), Positives = 461/568 (81%), Gaps = 13/568 (2%)
Query: 44 LGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWT 103
+ G+ ++ R +AR+LFD MPE + ++ +V GY Q+G + E R++FD+MP++NV+SWT
Sbjct: 1 MAGYFQNKRPREARKLFDKMPETNTISWNGLVSGYVQNGMISEARKVFDKMPERNVVSWT 60
Query: 104 TMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVA 163
MI GYV I+ A LF MPE+N VSWT ML G + GR+ +A +LF MP+K VVA
Sbjct: 61 AMIRGYVQEGLIEEAELLFWRMPERNVVSWTVMLGGLIEDGRVDEARQLFDMMPVKDVVA 120
Query: 164 SNSMILGLGQNGEVQKARVVFDQMR-------------EKDDATWSGMIKVYERKGYELE 210
S +MI GL G + +AR +FD+M EKDD TWS MIK+YERKG+ELE
Sbjct: 121 STNMIDGLCSEGRLIEAREIFDEMPQRNVVAWTSMISGEKDDGTWSTMIKIYERKGFELE 180
Query: 211 VIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLIT 270
+ LF+LMQ+EGVR +FPS+ISVLSVC SLASLDHGRQVH+QLVR QFD+D+YV+SVLIT
Sbjct: 181 ALALFSLMQREGVRPSFPSVISVLSVCGSLASLDHGRQVHSQLVRSQFDIDIYVSSVLIT 240
Query: 271 MYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVT 330
MYIKCG+LV K +FD F+SKDIVMWNSII+GYAQ+G GEK+L+VFH+MFSS + PD++T
Sbjct: 241 MYIKCGDLVTAKRVFDRFSSKDIVMWNSIIAGYAQHGFGEKALEVFHDMFSSSIAPDEIT 300
Query: 331 LVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAM 390
+GVLSACSYTGKVKEG EIFESMKSKY V+PKTEHYACMVDLLGRAG++ +AM LIE M
Sbjct: 301 FIGVLSACSYTGKVKEGLEIFESMKSKYQVDPKTEHYACMVDLLGRAGKLNEAMNLIENM 360
Query: 391 PFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVA 450
P E DAI+WG+LLGACRTH LDLAE+AAKKLLQLEP NAGPYILLSN+Y+SQ R+ DV
Sbjct: 361 PVEADAIVWGALLGACRTHKNLDLAEIAAKKLLQLEPNNAGPYILLSNLYSSQSRWKDVV 420
Query: 451 ELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYC 510
ELRK MR +N+ K PGCSWIEV+KKVH+F+G SHPEH MI++ L K+G LLREAGYC
Sbjct: 421 ELRKTMRAKNLRKSPGCSWIEVDKKVHIFSGGGSTSHPEHEMILKKLGKLGALLREAGYC 480
Query: 511 PDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLI 570
PD SFV+HDVDEEEKVHSLR HSEKLAVAYGL+K+PEG+PIRVMKNLRVCGD HS IKLI
Sbjct: 481 PDGSFVMHDVDEEEKVHSLRDHSEKLAVAYGLLKVPEGMPIRVMKNLRVCGDSHSTIKLI 540
Query: 571 SKVMGREIILRDANRFHHFKDGLCSCRD 598
++V GREIILRD NRFHHFKDGLCSC D
Sbjct: 541 AQVTGREIILRDTNRFHHFKDGLCSCSD 568
Score = 209 bits (531), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 115/323 (35%), Positives = 184/323 (56%), Gaps = 23/323 (7%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MPERNVVSWTAM+RGYV+EG+I EA LFW+MPE+NVVSWTVMLGG I D R+D+AR+LF
Sbjct: 51 MPERNVVSWTAMIRGYVQEGLIEEAELLFWRMPERNVVSWTVMLGGLIEDGRVDEARQLF 110
Query: 61 DMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARK 120
DMMP KDVVA TNM+ G C +GR+ E REIFDEMP++NV++WT+MISG ++ K
Sbjct: 111 DMMPVKDVVASTNMIDGLCSEGRLIEAREIFDEMPQRNVVAWTSMISGEKDDGTWSTMIK 170
Query: 121 LFE--------------VMPEKNEVSWTAMLMGYTQCGRI-------QDAWELFKAMPMK 159
++E + E S+ +++ + CG + Q +L ++
Sbjct: 171 IYERKGFELEALALFSLMQREGVRPSFPSVISVLSVCGSLASLDHGRQVHSQLVRSQFDI 230
Query: 160 SVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQ 219
+ S+ +I + G++ A+ VFD+ KD W+ +I Y + G+ + +++F M
Sbjct: 231 DIYVSSVLITMYIKCGDLVTAKRVFDRFSSKDIVMWNSIIAGYAQHGFGEKALEVFHDMF 290
Query: 220 KEGVRVNFPSLISVLSVCASLASLDHGRQVHAQL-VRCQFDVDVYVASVLITMYIKCGEL 278
+ + + I VLS C+ + G ++ + + Q D + ++ + + G+L
Sbjct: 291 SSSIAPDEITFIGVLSACSYTGKVKEGLEIFESMKSKYQVDPKTEHYACMVDLLGRAGKL 350
Query: 279 VKGKLIFDNF-ASKDIVMWNSII 300
+ + +N D ++W +++
Sbjct: 351 NEAMNLIENMPVEADAIVWGALL 373
>gi|357112489|ref|XP_003558041.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Brachypodium distachyon]
Length = 706
Score = 802 bits (2071), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 363/596 (60%), Positives = 470/596 (78%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMP 64
+VVS+T+++RGYV G++ +A LF QMPE+N V++TV+LGGF+ R+++AR+LFD MP
Sbjct: 111 SVVSFTSLLRGYVRHGLLADAIRLFHQMPERNHVTYTVLLGGFLDAGRVNEARKLFDEMP 170
Query: 65 EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEV 124
+KDVVA+T M+ GYCQ GR+ E R +FDEMPK+NV+SWT MISGY N ++ +ARKLFEV
Sbjct: 171 DKDVVARTAMLSGYCQAGRITEARALFDEMPKRNVVSWTAMISGYAQNGKVILARKLFEV 230
Query: 125 MPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVF 184
MP++NEVSWTAML+GY Q G ++DA +LF AMP V A N+M++G GQ+G V A+ +F
Sbjct: 231 MPDRNEVSWTAMLVGYIQAGHVEDAEDLFNAMPDHPVAACNAMMVGFGQHGMVDAAKAMF 290
Query: 185 DQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLD 244
++M +DD TWS MIKVYE+ + +E + F M G+R N+ S IS+L+VCA+LA+ D
Sbjct: 291 ERMCARDDGTWSAMIKVYEQNEFLMEALSTFREMLCRGIRPNYTSFISILTVCAALATAD 350
Query: 245 HGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYA 304
+GR++HA ++RC FD DV+ S LITMYIKCG L K K +F+ F KD+VMWNS+I+GYA
Sbjct: 351 YGRELHAAMLRCSFDTDVFAVSALITMYIKCGNLDKAKRVFNMFEPKDVVMWNSMITGYA 410
Query: 305 QYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKT 364
Q+GLGE++L +F ++ + + PD +T +GVL+ACSYTGKVKEGREIF SM +
Sbjct: 411 QHGLGEEALGIFDDLRLARMAPDGITYIGVLTACSYTGKVKEGREIFNSMGMNSSIRLGA 470
Query: 365 EHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQ 424
HY+CMVDLLGRAG V++A+ LI MP EPDAIIWG+L+GACR H ++AEVAAKKLL+
Sbjct: 471 AHYSCMVDLLGRAGLVDEALDLINNMPVEPDAIIWGALMGACRMHKNAEIAEVAAKKLLE 530
Query: 425 LEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDC 484
LEP +AGPY+LLS+IY S GR+ D +++RK + RN+ K PGCSWIE K VH+FT D
Sbjct: 531 LEPGSAGPYVLLSHIYTSTGRWEDASDMRKFISSRNLNKSPGCSWIEYNKMVHLFTSGDV 590
Query: 485 VSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVK 544
+SHPEH +I+ MLE++ GLL E+GY D SFVLHDVDEE+K SLRYHSE+ AVAYGL+K
Sbjct: 591 LSHPEHAIILNMLEELDGLLMESGYSADGSFVLHDVDEEQKAQSLRYHSERQAVAYGLLK 650
Query: 545 LPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
+P G+PIRVMKNLRVCGDCHSAIKLI+K+ REIILRDANRFHHFKDGLCSCRDYW
Sbjct: 651 VPAGMPIRVMKNLRVCGDCHSAIKLITKITSREIILRDANRFHHFKDGLCSCRDYW 706
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 107/412 (25%), Positives = 203/412 (49%), Gaps = 45/412 (10%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGF-IRDSRIDDARRL 59
MP R S+ A++ GY + A LF +MP +++ S+ ++ G +R + DA
Sbjct: 43 MPLRTTASYNALIAGYFRNHLPDAALGLFHRMPSRDLGSYNALIAGLSLRRHTLPDAAAA 102
Query: 60 FDMMP-EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVA 118
+P VV+ T+++ GY + G + + +F +MP++N +++T ++ G+++ R++ A
Sbjct: 103 LASIPLPPSVVSFTSLLRGYVRHGLLADAIRLFHQMPERNHVTYTVLLGGFLDAGRVNEA 162
Query: 119 RKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQ 178
RKLF+ MP+K+ V+ TAML GY Q GRI +A LF MP ++VV+ +MI G QNG+V
Sbjct: 163 RKLFDEMPDKDVVARTAMLSGYCQAGRITEARALFDEMPKRNVVSWTAMISGYAQNGKVI 222
Query: 179 KARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCA 238
AR +F+ M ++++ +W+ M+ Y + G+ + DLF M
Sbjct: 223 LARKLFEVMPDRNEVSWTAMLVGYIQAGHVEDAEDLFNAMP------------------- 263
Query: 239 SLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNS 298
D V + ++ + + G + K +F+ ++D W++
Sbjct: 264 --------------------DHPVAACNAMMVGFGQHGMVDAAKAMFERMCARDDGTWSA 303
Query: 299 IISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKY 358
+I Y Q ++L F EM G+ P+ + + +L+ C+ GRE+ +M +
Sbjct: 304 MIKVYEQNEFLMEALSTFREMLCRGIRPNYTSFISILTVCAALATADYGRELHAAML-RC 362
Query: 359 LVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEP-DAIIWGSLLGACRTH 409
+ + ++ + + G ++ A ++ FEP D ++W S++ H
Sbjct: 363 SFDTDVFAVSALITMYIKCGNLDKAKRVFNM--FEPKDVVMWNSMITGYAQH 412
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 149/288 (51%), Gaps = 39/288 (13%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MP+++VV+ TAM+ GY + G ITEA LF +MP++NVVSWT M+ G+ ++ ++ AR+LF
Sbjct: 169 MPDKDVVARTAMLSGYCQAGRITEARALFDEMPKRNVVSWTAMISGYAQNGKVILARKLF 228
Query: 61 DMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARK 120
++MP+++ V+ T M++GY Q G V++ ++F+ MP V + M+ G+ + +D A+
Sbjct: 229 EVMPDRNEVSWTAMLVGYIQAGHVEDAEDLFNAMPDHPVAACNAMMVGFGQHGMVDAAKA 288
Query: 121 LFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKS-------------------- 160
+FE M +++ +W+AM+ Y Q + +A F+ M +
Sbjct: 289 MFERMCARDDGTWSAMIKVYEQNEFLMEALSTFREMLCRGIRPNYTSFISILTVCAALAT 348
Query: 161 -------------------VVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKV 201
V A +++I + G + KA+ VF+ KD W+ MI
Sbjct: 349 ADYGRELHAAMLRCSFDTDVFAVSALITMYIKCGNLDKAKRVFNMFEPKDVVMWNSMITG 408
Query: 202 YERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQV 249
Y + G E + +F ++ + + + I VL+ C+ + GR++
Sbjct: 409 YAQHGLGEEALGIFDDLRLARMAPDGITYIGVLTACSYTGKVKEGREI 456
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 84/339 (24%), Positives = 149/339 (43%), Gaps = 41/339 (12%)
Query: 160 SVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQ 219
+VVA+N+ I L + G ++ AR FD M + A+++ +I Y R + LF M
Sbjct: 16 AVVAANARIAWLVRAGNIEGARAAFDAMPLRTTASYNALIAGYFRNHLPDAALGLFHRMP 75
Query: 220 KEGVRVNFPSLISVLSV--------CASLASLD-----------------HGRQVHAQLV 254
+ ++ +LI+ LS+ A+LAS+ HG A +
Sbjct: 76 SRDLG-SYNALIAGLSLRRHTLPDAAAALASIPLPPSVVSFTSLLRGYVRHGLLADAIRL 134
Query: 255 RCQFDVDVYVA-SVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSL 313
Q +V +VL+ ++ G + + + +FD KD+V +++SGY Q G ++
Sbjct: 135 FHQMPERNHVTYTVLLGGFLDAGRVNEARKLFDEMPDKDVVARTAMLSGYCQAGRITEAR 194
Query: 314 KVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDL 373
+F EM V V+ ++S + GKV R++FE M + V + M+
Sbjct: 195 ALFDEMPKRNV----VSWTAMISGYAQNGKVILARKLFEVMPDRNEVS-----WTAMLVG 245
Query: 374 LGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPY 433
+AG VEDA L AMP P A ++G + H +D A+ +++ ++ G +
Sbjct: 246 YIQAGHVEDAEDLFNAMPDHPVAACNAMMVGFGQ-HGMVDAAKAMFERMCA---RDDGTW 301
Query: 434 ILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEV 472
+ +Y + + M R I+P S+I +
Sbjct: 302 SAMIKVYEQNEFLMEALSTFREMLCRG-IRPNYTSFISI 339
>gi|414866530|tpg|DAA45087.1| TPA: hypothetical protein ZEAMMB73_840863 [Zea mays]
Length = 851
Score = 735 bits (1897), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/557 (59%), Positives = 438/557 (78%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMP 64
+VVS+T+++RGYV G++ +A LF QMPE+N +S+TV+LGGF+ R+D+AR+LFD MP
Sbjct: 111 SVVSFTSLLRGYVRHGLLADAIQLFRQMPERNHISYTVLLGGFLDAGRVDEARKLFDEMP 170
Query: 65 EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEV 124
KDVVA T M+ GYCQ GRVDE R +FDEMPK+NV+SWT M+SGY N ++++ARKLFEV
Sbjct: 171 AKDVVAWTAMLSGYCQVGRVDEARTLFDEMPKRNVVSWTAMVSGYAQNGQVNLARKLFEV 230
Query: 125 MPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVF 184
MPE+NEVSWTAML GY Q GRI+DA ELF AMP + A N MI+G GQ G V A+ VF
Sbjct: 231 MPERNEVSWTAMLFGYIQAGRIEDAEELFNAMPDHPLAACNGMIVGFGQQGMVDAAKSVF 290
Query: 185 DQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLD 244
D+M E+DD TWS +IK YE+ + +E + F M G+R N+PS+IS+L+VCA+LA LD
Sbjct: 291 DRMCERDDGTWSAIIKAYEQNEFLMEALSTFREMLHIGIRPNYPSVISILTVCAALAVLD 350
Query: 245 HGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYA 304
+GR+VH ++R FD+D+Y S LITMYIKCG L K K +F F KD+VMWNS+I+GYA
Sbjct: 351 YGREVHGAMLRRSFDMDIYAVSALITMYIKCGNLDKAKRVFHMFEPKDVVMWNSMITGYA 410
Query: 305 QYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKT 364
Q+GLGE++L +F +M +G++PD +T +G L+ACSYTGKVKEGR+IF SM++K ++P
Sbjct: 411 QHGLGEEALHIFDDMRLAGMVPDGITYIGALTACSYTGKVKEGRDIFNSMRTKSGIKPGL 470
Query: 365 EHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQ 424
EHYACMVDLLGRAG V++A+ LI+ MP EPDA+IWG+L+GACR H ++AE++AKKLL+
Sbjct: 471 EHYACMVDLLGRAGLVDEALYLIKTMPVEPDAVIWGALMGACRMHKNAEIAEISAKKLLE 530
Query: 425 LEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDC 484
LEP NAGPY+LLS+IY S GR+ D + +RK + R++ K GCSWIE +K+VH+F D
Sbjct: 531 LEPGNAGPYVLLSHIYTSSGRWEDASNMRKFISSRHLNKSLGCSWIEYDKRVHLFKSGDV 590
Query: 485 VSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVK 544
++H EH I++MLEK+ GLL E+GY D SFVLHD+D+E+K HSLRYHSE+ AVAYGL+K
Sbjct: 591 LAHQEHASILKMLEKLDGLLMESGYSADGSFVLHDIDDEQKTHSLRYHSERQAVAYGLLK 650
Query: 545 LPEGVPIRVMKNLRVCG 561
+PE +PIRVMKNLRVCG
Sbjct: 651 IPEELPIRVMKNLRVCG 667
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 107/458 (23%), Positives = 195/458 (42%), Gaps = 36/458 (7%)
Query: 37 VVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPK 96
VV + R ++ AR F+ MP + + ++ GY ++ D +F MP
Sbjct: 17 VVDANARIARLARTGNMEGARATFEAMPLRTTASYNALLAGYFRNHLPDAALRVFHRMPT 76
Query: 97 KNVISWTTMISGYV--NNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFK 154
+++ S+ +ISG + D A L + + VS+T++L GY + G + DA +LF+
Sbjct: 77 RDLASYNALISGLSLRRHTLPDAAAALATIPYPPSVVSFTSLLRGYVRHGLLADAIQLFR 136
Query: 155 AMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDL 214
MP ++ ++ ++ G G V +AR +FD+M KD W+ M+ Y + G E L
Sbjct: 137 QMPERNHISYTVLLGGFLDAGRVDEARKLFDEMPAKDVVAWTAMLSGYCQVGRVDEARTL 196
Query: 215 FTLMQKEGV--------------RVNF--------PSLISVLSVCASLASLDHGRQVHA- 251
F M K V +VN P V + GR A
Sbjct: 197 FDEMPKRNVVSWTAMVSGYAQNGQVNLARKLFEVMPERNEVSWTAMLFGYIQAGRIEDAE 256
Query: 252 QLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEK 311
+L D + + +I + + G + K +FD +D W++II Y Q +
Sbjct: 257 ELFNAMPDHPLAACNGMIVGFGQQGMVDAAKSVFDRMCERDDGTWSAIIKAYEQNEFLME 316
Query: 312 SLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMV 371
+L F EM G+ P+ +++ +L+ C+ + GRE+ +M + + + ++
Sbjct: 317 ALSTFREMLHIGIRPNYPSVISILTVCAALAVLDYGREVHGAMLRRSF-DMDIYAVSALI 375
Query: 372 DLLGRAGQVEDAMKLIEAMPFEP-DAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNA 430
+ + G ++ A ++ FEP D ++W S++ H L E A +
Sbjct: 376 TMYIKCGNLDKAKRVFHM--FEPKDVVMWNSMITGYAQH---GLGEEALHIFDDMRLAGM 430
Query: 431 GP----YILLSNIYASQGRFHDVAELRKNMRKRNVIKP 464
P YI + G+ + ++ +MR ++ IKP
Sbjct: 431 VPDGITYIGALTACSYTGKVKEGRDIFNSMRTKSGIKP 468
>gi|359491499|ref|XP_003634283.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 766
Score = 647 bits (1670), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 300/631 (47%), Positives = 425/631 (67%), Gaps = 32/631 (5%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MPER+VVSW AM+ GY + G + EA +F +MP KN +SW ML ++++ RI+DARRLF
Sbjct: 137 MPERDVVSWNAMLSGYAQNGYVKEAKEIFDEMPCKNSISWNGMLAAYVQNGRIEDARRLF 196
Query: 61 -------------------------------DMMPEKDVVAQTNMVLGYCQDGRVDEGRE 89
D MPE+D V+ M+ GY Q+G + E +
Sbjct: 197 ESKADWELISWNCMMGGYVKRNRLVDARGIFDRMPERDEVSWNTMISGYAQNGELLEAQR 256
Query: 90 IFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDA 149
+F+E P ++V +WT M+SGYV N +D AR++F+ MPEKN VSW A++ GY QC R+ A
Sbjct: 257 LFEESPVRDVFTWTAMVSGYVQNGMLDEARRVFDGMPEKNSVSWNAIIAGYVQCKRMDQA 316
Query: 150 WELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYEL 209
ELF+AMP ++V + N+MI G QNG++ +AR FD+M ++D +W+ +I Y + GY
Sbjct: 317 RELFEAMPCQNVSSWNTMITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGE 376
Query: 210 EVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLI 269
E + LF M+++G R+N + S LS CA +A+L+ G+QVH ++V+ + YV + L+
Sbjct: 377 EALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALL 436
Query: 270 TMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDV 329
MY KCG + ++F+ K++V WN++I+GYA++G G+++L +F M +G++PDDV
Sbjct: 437 VMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDV 496
Query: 330 TLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEA 389
T+VGVLSACS+TG V +G E F SM Y + ++HY CM+DLLGRAG+++DA L++
Sbjct: 497 TMVGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKN 556
Query: 390 MPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDV 449
MPFEPDA WG+LLGA R H +L E AAK + ++EP N+G Y+LLSN+YA+ GR+ DV
Sbjct: 557 MPFEPDAATWGALLGASRIHGNTELGEKAAKMIFEMEPDNSGMYVLLSNLYAASGRWGDV 616
Query: 450 AELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGY 509
+R MR R V K PG SW+EV+ K+H FT D V HPE I LE++ +++ GY
Sbjct: 617 GRMRLRMRDRGVKKVPGYSWVEVQNKIHTFTVGDSV-HPERDRIYTFLEELDLKMKKEGY 675
Query: 510 CPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKL 569
+ VLHDV+EEEKVH L+YHSEKLAVA+G++ +P G PIRV+KNLRVC DCH+A+K
Sbjct: 676 VSSTKLVLHDVEEEEKVHMLKYHSEKLAVAFGILAIPAGRPIRVIKNLRVCEDCHNAMKH 735
Query: 570 ISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
ISK++GR IILRD++RFHHF G CSC DYW
Sbjct: 736 ISKIVGRLIILRDSHRFHHFNGGQCSCGDYW 766
Score = 241 bits (614), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 158/504 (31%), Positives = 249/504 (49%), Gaps = 47/504 (9%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MP R+ +SW AM+ G + A LF +MP +++VSW VM+ G +R + AR LF
Sbjct: 75 MPRRSSISWNAMISGCLSNDKFYLARQLFEKMPTRDLVSWNVMISGCVRYRNLRAARLLF 134
Query: 61 DMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARK 120
D MPE+DVV+ M+ GY Q+G V E +EIFDEMP KN ISW M++ YV N RI+ AR+
Sbjct: 135 DQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEMPCKNSISWNGMLAAYVQNGRIEDARR 194
Query: 121 LFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKA 180
LFE + +SW M+ GY + R+ DA +F MP + V+ N+MI G QNGE+ +A
Sbjct: 195 LFESKADWELISWNCMMGGYVKRNRLVDARGIFDRMPERDEVSWNTMISGYAQNGELLEA 254
Query: 181 RVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASL 240
+ +F++ +D TW+ M+ Y + G E +F M E V++ ++I+ C
Sbjct: 255 QRLFEESPVRDVFTWTAMVSGYVQNGMLDEARRVFDGM-PEKNSVSWNAIIAGYVQC--- 310
Query: 241 ASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSII 300
+D R++ + + CQ +V + +IT Y + G++ + + FD +D + W +II
Sbjct: 311 KRMDQARELF-EAMPCQ---NVSSWNTMITGYAQNGDIAQARNFFDRMPQRDSISWAAII 366
Query: 301 SGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREI--------FE 352
+GYAQ G GE++L +F EM G + T LS C+ ++ G+++ E
Sbjct: 367 AGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLE 426
Query: 353 S-----------------MKSKYLV-----EPKTEHYACMVDLLGRAGQVEDAMKLIEAM 390
S + Y+V E + + M+ R G ++A+ L E+M
Sbjct: 427 SGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFGKEALMLFESM 486
Query: 391 P---FEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLE--PKNAGPYILLSNIYASQGR 445
PD + +L AC +D + Q N+ Y + ++ GR
Sbjct: 487 KKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGR 546
Query: 446 FHDVAELRKNMRKRNVIKPPGCSW 469
D L KNM +P +W
Sbjct: 547 LDDAQNLMKNM----PFEPDAATW 566
>gi|297734304|emb|CBI15551.3| unnamed protein product [Vitis vinifera]
Length = 685
Score = 645 bits (1665), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 300/631 (47%), Positives = 425/631 (67%), Gaps = 32/631 (5%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MPER+VVSW AM+ GY + G + EA +F +MP KN +SW ML ++++ RI+DARRLF
Sbjct: 56 MPERDVVSWNAMLSGYAQNGYVKEAKEIFDEMPCKNSISWNGMLAAYVQNGRIEDARRLF 115
Query: 61 -------------------------------DMMPEKDVVAQTNMVLGYCQDGRVDEGRE 89
D MPE+D V+ M+ GY Q+G + E +
Sbjct: 116 ESKADWELISWNCMMGGYVKRNRLVDARGIFDRMPERDEVSWNTMISGYAQNGELLEAQR 175
Query: 90 IFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDA 149
+F+E P ++V +WT M+SGYV N +D AR++F+ MPEKN VSW A++ GY QC R+ A
Sbjct: 176 LFEESPVRDVFTWTAMVSGYVQNGMLDEARRVFDGMPEKNSVSWNAIIAGYVQCKRMDQA 235
Query: 150 WELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYEL 209
ELF+AMP ++V + N+MI G QNG++ +AR FD+M ++D +W+ +I Y + GY
Sbjct: 236 RELFEAMPCQNVSSWNTMITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGE 295
Query: 210 EVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLI 269
E + LF M+++G R+N + S LS CA +A+L+ G+QVH ++V+ + YV + L+
Sbjct: 296 EALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALL 355
Query: 270 TMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDV 329
MY KCG + ++F+ K++V WN++I+GYA++G G+++L +F M +G++PDDV
Sbjct: 356 VMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDV 415
Query: 330 TLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEA 389
T+VGVLSACS+TG V +G E F SM Y + ++HY CM+DLLGRAG+++DA L++
Sbjct: 416 TMVGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKN 475
Query: 390 MPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDV 449
MPFEPDA WG+LLGA R H +L E AAK + ++EP N+G Y+LLSN+YA+ GR+ DV
Sbjct: 476 MPFEPDAATWGALLGASRIHGNTELGEKAAKMIFEMEPDNSGMYVLLSNLYAASGRWGDV 535
Query: 450 AELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGY 509
+R MR R V K PG SW+EV+ K+H FT D V HPE I LE++ +++ GY
Sbjct: 536 GRMRLRMRDRGVKKVPGYSWVEVQNKIHTFTVGDSV-HPERDRIYTFLEELDLKMKKEGY 594
Query: 510 CPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKL 569
+ VLHDV+EEEKVH L+YHSEKLAVA+G++ +P G PIRV+KNLRVC DCH+A+K
Sbjct: 595 VSSTKLVLHDVEEEEKVHMLKYHSEKLAVAFGILAIPAGRPIRVIKNLRVCEDCHNAMKH 654
Query: 570 ISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
ISK++GR IILRD++RFHHF G CSC DYW
Sbjct: 655 ISKIVGRLIILRDSHRFHHFNGGQCSCGDYW 685
>gi|297809863|ref|XP_002872815.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318652|gb|EFH49074.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 776
Score = 644 bits (1660), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 299/600 (49%), Positives = 415/600 (69%), Gaps = 1/600 (0%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MPE+N VSW A++ YV+ + EA LF +VSW +LGGF++ +I +AR+ F
Sbjct: 178 MPEKNDVSWNALLSAYVQNSKLEEACVLFGSRENWALVSWNCLLGGFVKKKKIVEARQFF 237
Query: 61 DMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARK 120
D M +DVV+ ++ GY Q+G +DE R++FDE P +V +WT M+SGY+ N ++ AR+
Sbjct: 238 DSMKVRDVVSWNTIITGYAQNGEIDEARQLFDESPVHDVFTWTAMVSGYIQNRMVEEARE 297
Query: 121 LFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKA 180
LF+ MPE+NEVSW AML GY Q R++ A ELF MP ++V N+MI G Q G++ +A
Sbjct: 298 LFDRMPERNEVSWNAMLAGYVQGERVEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEA 357
Query: 181 RVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASL 240
+ +FD+M ++D +W+ MI Y + G+ E + LF LM++EG R+N S S LS CA +
Sbjct: 358 KNLFDKMPKRDPVSWAAMIAGYSQSGHSYEALRLFVLMEREGGRLNRSSFSSALSTCADV 417
Query: 241 ASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSII 300
+L+ G+Q+H +LV+ ++ +V + L+ MY KCG + + +F A KDIV WN++I
Sbjct: 418 VALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMI 477
Query: 301 SGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLV 360
+GY+++G GE++L+ F M G+ PDD T+V VLSACS+TG V +GR+ F +M Y V
Sbjct: 478 AGYSRHGFGEEALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFHTMTQDYGV 537
Query: 361 EPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAK 420
P ++HYACMVDLLGRAG +E+A L++ MPFEPDA IWG+LLGA R H +LAE AA
Sbjct: 538 RPNSQHYACMVDLLGRAGLLEEAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAAD 597
Query: 421 KLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFT 480
K+ +EP+N+G Y+LLSN+YAS GR+ DV +LR MR + V K PG SWIE++ K H F+
Sbjct: 598 KIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFS 657
Query: 481 GRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAY 540
D HPE I LE + +++AGY +S VLHDV+EEEK +RYHSE+LAVAY
Sbjct: 658 VGDEF-HPEKDEIFAFLEDLDLRMKKAGYVSKTSVVLHDVEEEEKERMVRYHSERLAVAY 716
Query: 541 GLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
G++++ G PIRV+KNLRVC DCH+AIK ++KV GR IILRD NRFHHFKDG CSC DYW
Sbjct: 717 GIMRVSSGRPIRVIKNLRVCEDCHNAIKYMAKVTGRLIILRDNNRFHHFKDGSCSCGDYW 776
Score = 222 bits (565), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 147/501 (29%), Positives = 244/501 (48%), Gaps = 63/501 (12%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MP + VS+ AM+ GY+ G A LF +MPE+++VSW VM+ G++R+ + AR LF
Sbjct: 85 MPRWSSVSYNAMISGYLRNGEFELARMLFDEMPERDLVSWNVMIKGYVRNRNLGKARELF 144
Query: 61 DMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARK 120
+ MPE+DV + ++ GY Q+G VD+ R +FD MP+KN +SW ++S YV N++++ A
Sbjct: 145 ERMPERDVCSWNTILSGYAQNGCVDDARRVFDRMPEKNDVSWNALLSAYVQNSKLEEACV 204
Query: 121 LFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKA 180
LF VSW +L G+ + +I +A + F +M ++ VV+ N++I G QNGE+ +A
Sbjct: 205 LFGSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMKVRDVVSWNTIITGYAQNGEIDEA 264
Query: 181 RVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASL 240
R +FD+ D TW+ M+ Y + E +LF M + + +S A L
Sbjct: 265 RQLFDESPVHDVFTWTAMVSGYIQNRMVEEARELFDRMPER----------NEVSWNAML 314
Query: 241 ASLDHGRQVHAQLVRCQFDV----DVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMW 296
A G +V ++ + FDV +V + +IT Y +CG++ + K +FD +D V W
Sbjct: 315 AGYVQGERV--EMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSW 372
Query: 297 NSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACS----------------- 339
++I+GY+Q G ++L++F M G + + LS C+
Sbjct: 373 AAMIAGYSQSGHSYEALRLFVLMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVK 432
Query: 340 ------------------YTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVE 381
G ++E ++F+ M K +V T M+ R G E
Sbjct: 433 GGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNT-----MIAGYSRHGFGE 487
Query: 382 DAMKLIEAMPFE---PDAIIWGSLLGACRTHMKLDLAEVAAKKLLQ---LEPKNAGPYIL 435
+A++ E+M E PD ++L AC +D + Q + P N+ Y
Sbjct: 488 EALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFHTMTQDYGVRP-NSQHYAC 546
Query: 436 LSNIYASQGRFHDVAELRKNM 456
+ ++ G + L KNM
Sbjct: 547 MVDLLGRAGLLEEAHNLMKNM 567
>gi|15235498|ref|NP_192184.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213324|sp|Q9SY02.1|PP301_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g02750
gi|4263522|gb|AAD15348.1| hypothetical protein [Arabidopsis thaliana]
gi|7269760|emb|CAB77760.1| hypothetical protein [Arabidopsis thaliana]
gi|332656824|gb|AEE82224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 781
Score = 640 bits (1651), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 301/631 (47%), Positives = 422/631 (66%), Gaps = 32/631 (5%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKN------------------------ 36
MPER+V SW M+ GY + G + +A ++F +MPEKN
Sbjct: 152 MPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLF 211
Query: 37 -------VVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGRE 89
+VSW +LGGF++ +I +AR+ FD M +DVV+ ++ GY Q G++DE R+
Sbjct: 212 KSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQ 271
Query: 90 IFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDA 149
+FDE P ++V +WT M+SGY+ N ++ AR+LF+ MPE+NEVSW AML GY Q R++ A
Sbjct: 272 LFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMA 331
Query: 150 WELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYEL 209
ELF MP ++V N+MI G Q G++ +A+ +FD+M ++D +W+ MI Y + G+
Sbjct: 332 KELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSF 391
Query: 210 EVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLI 269
E + LF M++EG R+N S S LS CA + +L+ G+Q+H +LV+ ++ +V + L+
Sbjct: 392 EALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALL 451
Query: 270 TMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDV 329
MY KCG + + +F A KDIV WN++I+GY+++G GE +L+ F M G+ PDD
Sbjct: 452 LMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDA 511
Query: 330 TLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEA 389
T+V VLSACS+TG V +GR+ F +M Y V P ++HYACMVDLLGRAG +EDA L++
Sbjct: 512 TMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKN 571
Query: 390 MPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDV 449
MPFEPDA IWG+LLGA R H +LAE AA K+ +EP+N+G Y+LLSN+YAS GR+ DV
Sbjct: 572 MPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDV 631
Query: 450 AELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGY 509
+LR MR + V K PG SWIE++ K H F+ D HPE I LE++ +++AGY
Sbjct: 632 GKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEF-HPEKDEIFAFLEELDLRMKKAGY 690
Query: 510 CPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKL 569
+S VLHDV+EEEK +RYHSE+LAVAYG++++ G PIRV+KNLRVC DCH+AIK
Sbjct: 691 VSKTSVVLHDVEEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKY 750
Query: 570 ISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
++++ GR IILRD NRFHHFKDG CSC DYW
Sbjct: 751 MARITGRLIILRDNNRFHHFKDGSCSCGDYW 781
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 145/501 (28%), Positives = 246/501 (49%), Gaps = 63/501 (12%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MP + VS+ M+ GY+ G A LF +MPE+++VSW VM+ G++R+ + AR LF
Sbjct: 90 MPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELF 149
Query: 61 DMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARK 120
++MPE+DV + M+ GY Q+G VD+ R +FD MP+KN +SW ++S YV N++++ A
Sbjct: 150 EIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACM 209
Query: 121 LFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKA 180
LF+ VSW +L G+ + +I +A + F +M ++ VV+ N++I G Q+G++ +A
Sbjct: 210 LFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEA 269
Query: 181 RVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASL 240
R +FD+ +D TW+ M+ Y + E +LF M + + +S A L
Sbjct: 270 RQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPER----------NEVSWNAML 319
Query: 241 ASLDHGRQVHAQLVRCQFDV----DVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMW 296
A G ++ ++ + FDV +V + +IT Y +CG++ + K +FD +D V W
Sbjct: 320 AGYVQGERM--EMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSW 377
Query: 297 NSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACS----------------- 339
++I+GY+Q G ++L++F +M G + + LS C+
Sbjct: 378 AAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVK 437
Query: 340 ------------------YTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVE 381
G ++E ++F+ M K +V T M+ R G E
Sbjct: 438 GGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNT-----MIAGYSRHGFGE 492
Query: 382 DAMKLIEAMPFE---PDAIIWGSLLGACRTHMKLDLAEVAAKKLLQ---LEPKNAGPYIL 435
A++ E+M E PD ++L AC +D + Q + P N+ Y
Sbjct: 493 VALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMP-NSQHYAC 551
Query: 436 LSNIYASQGRFHDVAELRKNM 456
+ ++ G D L KNM
Sbjct: 552 MVDLLGRAGLLEDAHNLMKNM 572
>gi|92870988|gb|ABE80149.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 766
Score = 620 bits (1600), Expect = e-175, Method: Compositional matrix adjust.
Identities = 283/600 (47%), Positives = 409/600 (68%), Gaps = 1/600 (0%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MPE+N +SW ++ YV G I EA LF + +++SW ++GGF+R ++ DAR LF
Sbjct: 168 MPEKNSISWNGLLAAYVHNGRIEEACLLFESKSDWDLISWNCLMGGFVRKKKLGDARWLF 227
Query: 61 DMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARK 120
D MP +D ++ M+ GY Q G + + R +FDE P ++V +WT M+SGYV N +D A+
Sbjct: 228 DKMPVRDAISWNTMISGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKT 287
Query: 121 LFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKA 180
F+ MPEKNEVS+ AM+ GY Q ++ A ELF++MP +++ + N+MI G GQ G++ +A
Sbjct: 288 FFDEMPEKNEVSYNAMIAGYVQTKKMDIARELFESMPCRNISSWNTMITGYGQIGDIAQA 347
Query: 181 RVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASL 240
R FD M ++D +W+ +I Y + G+ E +++F ++++G +N + LS CA +
Sbjct: 348 RKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADI 407
Query: 241 ASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSII 300
A+L+ G+Q+H Q V+ + +V + L+ MY KCG + + F+ KD+V WN+++
Sbjct: 408 AALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTML 467
Query: 301 SGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLV 360
+GYA++G G ++L VF M ++GV PD++T+VGVLSACS+TG + G E F SM Y V
Sbjct: 468 AGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGV 527
Query: 361 EPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAK 420
P ++HY CM+DLLGRAG++E+A LI MPF+P A WG+LLGA R H +L E AA+
Sbjct: 528 IPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLGASRIHGNTELGEKAAE 587
Query: 421 KLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFT 480
+ ++EP+N+G Y+LLSN+YA+ GR+ D ++R MR V K PG SW+EV+ K+H F+
Sbjct: 588 MVFKMEPQNSGMYVLLSNLYAASGRWVDADKMRSKMRDIGVQKVPGYSWVEVQNKIHTFS 647
Query: 481 GRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAY 540
DC SHPE I LE++ +RE GY + VLHDV+EEEK H L+YHSEKLAVA+
Sbjct: 648 VGDC-SHPEKERIYAYLEELDLKMREEGYVSLTKLVLHDVEEEEKEHMLKYHSEKLAVAF 706
Query: 541 GLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
G++ +P G PIRVMKNLRVC DCHSAIK ISK++GR IILRD++RFHHF +G CSC DYW
Sbjct: 707 GILTIPGGRPIRVMKNLRVCEDCHSAIKHISKIVGRLIILRDSHRFHHFNEGFCSCGDYW 766
Score = 243 bits (619), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 135/410 (32%), Positives = 229/410 (55%), Gaps = 12/410 (2%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MP R+ VS+ AM+ GY+ A LF QMPE+++ SW VML G++R+ R+ DARRLF
Sbjct: 75 MPRRSSVSYNAMISGYLRNSKFNLARNLFDQMPERDLFSWNVMLTGYVRNCRLGDARRLF 134
Query: 61 DMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARK 120
D+MPEKDVV+ +++ GY Q+G VDE RE+FD MP+KN ISW +++ YV+N RI+ A
Sbjct: 135 DLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNMPEKNSISWNGLLAAYVHNGRIEEACL 194
Query: 121 LFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKA 180
LFE + + +SW ++ G+ + ++ DA LF MP++ ++ N+MI G Q G + +A
Sbjct: 195 LFESKSDWDLISWNCLMGGFVRKKKLGDARWLFDKMPVRDAISWNTMISGYAQGGGLSQA 254
Query: 181 RVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASL 240
R +FD+ +D TW+ M+ Y + G E F M ++ N S ++++
Sbjct: 255 RRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMPEK----NEVSYNAMIAGYVQT 310
Query: 241 ASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSII 300
+D R++ + C+ ++ + +IT Y + G++ + + FD +D V W +II
Sbjct: 311 KKMDIARELFESMP-CR---NISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAII 366
Query: 301 SGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIF-ESMKSKYL 359
+GYAQ G E++L +F E+ G + T LS C+ ++ G++I +++K Y
Sbjct: 367 AGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGYG 426
Query: 360 VEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTH 409
+ ++ + + G +++A E + E D + W ++L H
Sbjct: 427 TGCFVGN--ALLAMYFKCGSIDEANDTFEGIE-EKDVVSWNTMLAGYARH 473
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 96/375 (25%), Positives = 187/375 (49%), Gaps = 49/375 (13%)
Query: 31 QMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREI 90
++ + +++ W + +R+ D A +F+ MP + V+ M+ GY ++ + + R +
Sbjct: 43 RVKDPDILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNL 102
Query: 91 FDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAW 150
FD+MP++++ SW M++GYV N R+ AR+LF++MPEK+ VSW ++L GY Q G + +A
Sbjct: 103 FDQMPERDLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAR 162
Query: 151 ELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELE 210
E+F MP K+ ++ N ++ NG +++A ++F+ + D +W+ ++ + RK +
Sbjct: 163 EVFDNMPEKNSISWNGLLAAYVHNGRIEEACLLFESKSDWDLISWNCLMGGFVRKK---K 219
Query: 211 VIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLIT 270
+ D L K VR D + +I+
Sbjct: 220 LGDARWLFDKMPVR------------------------------------DAISWNTMIS 243
Query: 271 MYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVT 330
Y + G L + + +FD ++D+ W +++SGY Q G+ +++ F EM ++V+
Sbjct: 244 GYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMPEK----NEVS 299
Query: 331 LVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAM 390
+++ T K+ RE+FESM + + T M+ G+ G + A K + M
Sbjct: 300 YNAMIAGYVQTKKMDIARELFESMPCRNISSWNT-----MITGYGQIGDIAQARKFFDMM 354
Query: 391 PFEPDAIIWGSLLGA 405
P + D + W +++
Sbjct: 355 P-QRDCVSWAAIIAG 368
>gi|357521591|ref|XP_003631084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525106|gb|AET05560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 980
Score = 620 bits (1599), Expect = e-175, Method: Compositional matrix adjust.
Identities = 283/600 (47%), Positives = 409/600 (68%), Gaps = 1/600 (0%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MPE+N +SW ++ YV G I EA LF + +++SW ++GGF+R ++ DAR LF
Sbjct: 168 MPEKNSISWNGLLAAYVHNGRIEEACLLFESKSDWDLISWNCLMGGFVRKKKLGDARWLF 227
Query: 61 DMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARK 120
D MP +D ++ M+ GY Q G + + R +FDE P ++V +WT M+SGYV N +D A+
Sbjct: 228 DKMPVRDAISWNTMISGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKT 287
Query: 121 LFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKA 180
F+ MPEKNEVS+ AM+ GY Q ++ A ELF++MP +++ + N+MI G GQ G++ +A
Sbjct: 288 FFDEMPEKNEVSYNAMIAGYVQTKKMDIARELFESMPCRNISSWNTMITGYGQIGDIAQA 347
Query: 181 RVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASL 240
R FD M ++D +W+ +I Y + G+ E +++F ++++G +N + LS CA +
Sbjct: 348 RKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADI 407
Query: 241 ASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSII 300
A+L+ G+Q+H Q V+ + +V + L+ MY KCG + + F+ KD+V WN+++
Sbjct: 408 AALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTML 467
Query: 301 SGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLV 360
+GYA++G G ++L VF M ++GV PD++T+VGVLSACS+TG + G E F SM Y V
Sbjct: 468 AGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGV 527
Query: 361 EPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAK 420
P ++HY CM+DLLGRAG++E+A LI MPF+P A WG+LLGA R H +L E AA+
Sbjct: 528 IPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLGASRIHGNTELGEKAAE 587
Query: 421 KLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFT 480
+ ++EP+N+G Y+LLSN+YA+ GR+ D ++R MR V K PG SW+EV+ K+H F+
Sbjct: 588 MVFKMEPQNSGMYVLLSNLYAASGRWVDADKMRSKMRDIGVQKVPGYSWVEVQNKIHTFS 647
Query: 481 GRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAY 540
DC SHPE I LE++ +RE GY + VLHDV+EEEK H L+YHSEKLAVA+
Sbjct: 648 VGDC-SHPEKERIYAYLEELDLKMREEGYVSLTKLVLHDVEEEEKEHMLKYHSEKLAVAF 706
Query: 541 GLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
G++ +P G PIRVMKNLRVC DCHSAIK ISK++GR IILRD++RFHHF +G CSC DYW
Sbjct: 707 GILTIPGGRPIRVMKNLRVCEDCHSAIKHISKIVGRLIILRDSHRFHHFNEGFCSCGDYW 766
Score = 242 bits (618), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 135/410 (32%), Positives = 229/410 (55%), Gaps = 12/410 (2%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MP R+ VS+ AM+ GY+ A LF QMPE+++ SW VML G++R+ R+ DARRLF
Sbjct: 75 MPRRSSVSYNAMISGYLRNSKFNLARNLFDQMPERDLFSWNVMLTGYVRNCRLGDARRLF 134
Query: 61 DMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARK 120
D+MPEKDVV+ +++ GY Q+G VDE RE+FD MP+KN ISW +++ YV+N RI+ A
Sbjct: 135 DLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNMPEKNSISWNGLLAAYVHNGRIEEACL 194
Query: 121 LFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKA 180
LFE + + +SW ++ G+ + ++ DA LF MP++ ++ N+MI G Q G + +A
Sbjct: 195 LFESKSDWDLISWNCLMGGFVRKKKLGDARWLFDKMPVRDAISWNTMISGYAQGGGLSQA 254
Query: 181 RVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASL 240
R +FD+ +D TW+ M+ Y + G E F M ++ N S ++++
Sbjct: 255 RRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMPEK----NEVSYNAMIAGYVQT 310
Query: 241 ASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSII 300
+D R++ + C+ ++ + +IT Y + G++ + + FD +D V W +II
Sbjct: 311 KKMDIARELFESMP-CR---NISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAII 366
Query: 301 SGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIF-ESMKSKYL 359
+GYAQ G E++L +F E+ G + T LS C+ ++ G++I +++K Y
Sbjct: 367 AGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGYG 426
Query: 360 VEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTH 409
+ ++ + + G +++A E + E D + W ++L H
Sbjct: 427 TGCFVGN--ALLAMYFKCGSIDEANDTFEGIE-EKDVVSWNTMLAGYARH 473
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 96/375 (25%), Positives = 187/375 (49%), Gaps = 49/375 (13%)
Query: 31 QMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREI 90
++ + +++ W + +R+ D A +F+ MP + V+ M+ GY ++ + + R +
Sbjct: 43 RVKDPDILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNL 102
Query: 91 FDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAW 150
FD+MP++++ SW M++GYV N R+ AR+LF++MPEK+ VSW ++L GY Q G + +A
Sbjct: 103 FDQMPERDLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAR 162
Query: 151 ELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELE 210
E+F MP K+ ++ N ++ NG +++A ++F+ + D +W+ ++ + RK +
Sbjct: 163 EVFDNMPEKNSISWNGLLAAYVHNGRIEEACLLFESKSDWDLISWNCLMGGFVRKK---K 219
Query: 211 VIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLIT 270
+ D L K VR D + +I+
Sbjct: 220 LGDARWLFDKMPVR------------------------------------DAISWNTMIS 243
Query: 271 MYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVT 330
Y + G L + + +FD ++D+ W +++SGY Q G+ +++ F EM ++V+
Sbjct: 244 GYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMPEK----NEVS 299
Query: 331 LVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAM 390
+++ T K+ RE+FESM + + T M+ G+ G + A K + M
Sbjct: 300 YNAMIAGYVQTKKMDIARELFESMPCRNISSWNT-----MITGYGQIGDIAQARKFFDMM 354
Query: 391 PFEPDAIIWGSLLGA 405
P + D + W +++
Sbjct: 355 P-QRDCVSWAAIIAG 368
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 101/292 (34%), Positives = 135/292 (46%), Gaps = 70/292 (23%)
Query: 316 FHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLG 375
FH D L L YTG + G E F M +Y V P ++HY CM+DLLG
Sbjct: 752 FHHFNEGFCSCGDYWLQFFLLVVIYTGLLDTGAEYFYPMNEEYSVTPTSKHYTCMIDLLG 811
Query: 376 RAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYIL 435
R ++E+ G+LLGA R H +L E AA+ ++ P+N+G
Sbjct: 812 RVDRLEE-----------------GALLGASRIHGNTELGEKAAQMFFKMGPQNSGI--- 851
Query: 436 LSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMR 495
MR V K PG SW EV+ K+H F+ +S R
Sbjct: 852 ------------------SKMRDVGVQKVPGYSWFEVQNKIHTFSVGLFLS--------R 885
Query: 496 MLEKIGGLLREAGYCPDSSFVLHDVD------EEEKVHSLRYHSEKLAVAYGLVKLPEGV 549
E IG L ++D EEEK +L+Y SE LA A G++ +P G
Sbjct: 886 ERENIG--------------FLEELDLKMREREEEKERTLKYLSENLAAALGILTIPVGR 931
Query: 550 PIRVMKN-LRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
P RVMK + VC DC SAIK +SK++GR I LRD+ H F + +CSC +YW
Sbjct: 932 PNRVMKKRVYVCEDCRSAIKHMSKIVGRLITLRDS---HRFNESICSCGEYW 980
>gi|449497589|ref|XP_004160443.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 619 bits (1597), Expect = e-174, Method: Compositional matrix adjust.
Identities = 289/631 (45%), Positives = 419/631 (66%), Gaps = 33/631 (5%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKN------------------------ 36
MPE++VVSW AM+ G+ + G + EA +F QM KN
Sbjct: 148 MPEKDVVSWNAMLSGFAQNGFVEEARKIFDQMLVKNEISWNGLLSAYVQNGRIEDARRLF 207
Query: 37 -------VVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGRE 89
+VSW ++GG++R R+DDAR LFD MP +D ++ M+ GY Q+G + E R
Sbjct: 208 DSKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEARR 267
Query: 90 IFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDA 149
+F+E+P ++V +WT M+SG+V N +D A ++FE MPEKNEVSW AM+ GY Q +I+ A
Sbjct: 268 LFEELPIRDVFAWTAMVSGFVQNGMLDEATRIFEEMPEKNEVSWNAMIAGYVQSQQIEKA 327
Query: 150 WELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYEL 209
ELF MP ++ + N+M+ G Q G + +A+++FD+M ++D +W+ MI Y + G
Sbjct: 328 RELFDQMPSRNTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSE 387
Query: 210 EVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLI 269
E + LF M+++G +N +L LS CA +A+L+ G+Q+H +LV+ F + L+
Sbjct: 388 EALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALL 447
Query: 270 TMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDV 329
MY KCG + + +F++ KDIV WN++I+GYA++G G+++L +F M + + PDDV
Sbjct: 448 AMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEALALFESMKMT-IKPDDV 506
Query: 330 TLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEA 389
TLVGVLSACS+TG V +G E F SM Y + +HY CM+DLLGRAG++++A+ L+++
Sbjct: 507 TLVGVLSACSHTGLVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKS 566
Query: 390 MPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDV 449
MPF PDA WG+LLGA R H +L E AA+K+ ++EP N+G Y+LLSN+YA+ GR+ +V
Sbjct: 567 MPFYPDAATWGALLGASRIHGDTELGEKAAEKVFEMEPDNSGMYVLLSNLYAASGRWREV 626
Query: 450 AELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGY 509
E+R MR + V K PG SW+E++ K H+FT DC SHPE I LE++ L++ G+
Sbjct: 627 REMRSKMRDKGVKKVPGYSWVEIQNKTHIFTVGDC-SHPEAERIYAYLEELDLELKKDGF 685
Query: 510 CPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKL 569
+ VLHDV+EEEK H L+YHSEKLAVA+G++ +P G PIRV+KNLRVC DCH+AIK
Sbjct: 686 VSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILSIPPGRPIRVIKNLRVCEDCHNAIKH 745
Query: 570 ISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
ISK+ R+II+RD+NRFHHF +G CSC DYW
Sbjct: 746 ISKITQRQIIVRDSNRFHHFSEGSCSCGDYW 776
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 126/414 (30%), Positives = 225/414 (54%), Gaps = 20/414 (4%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
M R+ V++ AM+ GY+ A +F +MP+++++SW VML G++++ + AR LF
Sbjct: 86 MRRRSTVTYNAMISGYLSNNKFDCARKVFEKMPDRDLISWNVMLSGYVKNGNLSAARALF 145
Query: 61 DMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARK 120
+ MPEKDVV+ M+ G+ Q+G V+E R+IFD+M KN ISW ++S YV N RI+ AR+
Sbjct: 146 NQMPEKDVVSWNAMLSGFAQNGFVEEARKIFDQMLVKNEISWNGLLSAYVQNGRIEDARR 205
Query: 121 LFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKA 180
LF+ + VSW ++ GY + R+ DA LF MP++ ++ N MI G QNG + +A
Sbjct: 206 LFDSKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEA 265
Query: 181 RVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASL 240
R +F+++ +D W+ M+ + + G E +F M ++ N S ++++
Sbjct: 266 RRLFEELPIRDVFAWTAMVSGFVQNGMLDEATRIFEEMPEK----NEVSWNAMIAGYVQS 321
Query: 241 ASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSII 300
++ R++ Q+ + + ++T Y +CG + + K++FD +D + W ++I
Sbjct: 322 QQIEKARELFDQMP----SRNTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMI 377
Query: 301 SGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYT-----GKVKEGREIFESMK 355
SGYAQ G E++L +F +M G + + L LS+C+ GK GR + +
Sbjct: 378 SGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQ 437
Query: 356 SKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTH 409
+ Y+ ++ + G+ G +E+A + E + E D + W +++ H
Sbjct: 438 TGYIAGN------ALLAMYGKCGSIEEAFDVFEDIT-EKDIVSWNTMIAGYARH 484
>gi|449439555|ref|XP_004137551.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 619 bits (1596), Expect = e-174, Method: Compositional matrix adjust.
Identities = 289/631 (45%), Positives = 419/631 (66%), Gaps = 33/631 (5%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKN------------------------ 36
MPE++VVSW AM+ G+ + G + EA +F QM KN
Sbjct: 148 MPEKDVVSWNAMLSGFAQNGFVEEARKIFDQMLVKNEISWNGLLSAYVQNGRIEDARRLF 207
Query: 37 -------VVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGRE 89
+VSW ++GG++R R+DDAR LFD MP +D ++ M+ GY Q+G + E R
Sbjct: 208 DSKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEARR 267
Query: 90 IFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDA 149
+F+E+P ++V +WT M+SG+V N +D A ++FE MPEKNEVSW AM+ GY Q +I+ A
Sbjct: 268 LFEELPIRDVFAWTAMVSGFVQNGMLDEATRIFEEMPEKNEVSWNAMIAGYVQSQQIEKA 327
Query: 150 WELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYEL 209
ELF MP ++ + N+M+ G Q G + +A+++FD+M ++D +W+ MI Y + G
Sbjct: 328 RELFDQMPSRNTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSE 387
Query: 210 EVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLI 269
E + LF M+++G +N +L LS CA +A+L+ G+Q+H +LV+ F + L+
Sbjct: 388 EALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALL 447
Query: 270 TMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDV 329
MY KCG + + +F++ KDIV WN++I+GYA++G G+++L +F M + + PDDV
Sbjct: 448 AMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEALALFESMKMT-IKPDDV 506
Query: 330 TLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEA 389
TLVGVLSACS+TG V +G E F SM Y + +HY CM+DLLGRAG++++A+ L+++
Sbjct: 507 TLVGVLSACSHTGFVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKS 566
Query: 390 MPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDV 449
MPF PDA WG+LLGA R H +L E AA+K+ ++EP N+G Y+LLSN+YA+ GR+ +V
Sbjct: 567 MPFYPDAATWGALLGASRIHGDTELGEKAAEKVFEMEPDNSGMYVLLSNLYAASGRWREV 626
Query: 450 AELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGY 509
E+R MR + V K PG SW+E++ K H+FT DC SHPE I LE++ L++ G+
Sbjct: 627 REMRSKMRDKGVKKVPGYSWVEIQNKTHIFTVGDC-SHPEAERIYAYLEELDLELKKDGF 685
Query: 510 CPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKL 569
+ VLHDV+EEEK H L+YHSEKLAVA+G++ +P G PIRV+KNLRVC DCH+AIK
Sbjct: 686 VSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILSIPPGRPIRVIKNLRVCEDCHNAIKH 745
Query: 570 ISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
ISK+ R+II+RD+NRFHHF +G CSC DYW
Sbjct: 746 ISKITQRQIIVRDSNRFHHFSEGSCSCGDYW 776
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 126/414 (30%), Positives = 225/414 (54%), Gaps = 20/414 (4%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
M R+ V++ AM+ GY+ A +F +MP+++++SW VML G++++ + AR LF
Sbjct: 86 MRRRSTVTYNAMISGYLSNNKFDCARKVFEKMPDRDLISWNVMLSGYVKNGNLSAARALF 145
Query: 61 DMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARK 120
+ MPEKDVV+ M+ G+ Q+G V+E R+IFD+M KN ISW ++S YV N RI+ AR+
Sbjct: 146 NQMPEKDVVSWNAMLSGFAQNGFVEEARKIFDQMLVKNEISWNGLLSAYVQNGRIEDARR 205
Query: 121 LFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKA 180
LF+ + VSW ++ GY + R+ DA LF MP++ ++ N MI G QNG + +A
Sbjct: 206 LFDSKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEA 265
Query: 181 RVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASL 240
R +F+++ +D W+ M+ + + G E +F M ++ N S ++++
Sbjct: 266 RRLFEELPIRDVFAWTAMVSGFVQNGMLDEATRIFEEMPEK----NEVSWNAMIAGYVQS 321
Query: 241 ASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSII 300
++ R++ Q+ + + ++T Y +CG + + K++FD +D + W ++I
Sbjct: 322 QQIEKARELFDQMP----SRNTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMI 377
Query: 301 SGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYT-----GKVKEGREIFESMK 355
SGYAQ G E++L +F +M G + + L LS+C+ GK GR + +
Sbjct: 378 SGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQ 437
Query: 356 SKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTH 409
+ Y+ ++ + G+ G +E+A + E + E D + W +++ H
Sbjct: 438 TGYIAGN------ALLAMYGKCGSIEEAFDVFEDIT-EKDIVSWNTMIAGYARH 484
>gi|356511263|ref|XP_003524346.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 763
Score = 617 bits (1592), Expect = e-174, Method: Compositional matrix adjust.
Identities = 280/600 (46%), Positives = 410/600 (68%), Gaps = 1/600 (0%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MP RN +SW ++ YV G + EA LF ++SW ++GG+++ + + DAR+LF
Sbjct: 165 MPHRNSISWNGLLAAYVHNGRLKEARRLFESQSNWELISWNCLMGGYVKRNMLGDARQLF 224
Query: 61 DMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARK 120
D MP +DV++ M+ GY Q G + + + +F+E P ++V +WT M+SGYV N +D ARK
Sbjct: 225 DRMPVRDVISWNTMISGYAQVGDLSQAKRLFNESPIRDVFTWTAMVSGYVQNGMVDEARK 284
Query: 121 LFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKA 180
F+ MP KNE+S+ AML GY Q ++ A ELF+AMP +++ + N+MI G GQNG + +A
Sbjct: 285 YFDEMPVKNEISYNAMLAGYVQYKKMVIAGELFEAMPCRNISSWNTMITGYGQNGGIAQA 344
Query: 181 RVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASL 240
R +FD M ++D +W+ +I Y + G+ E +++F M+++G N + LS CA +
Sbjct: 345 RKLFDMMPQRDCVSWAAIISGYAQNGHYEEALNMFVEMKRDGESSNRSTFSCALSTCADI 404
Query: 241 ASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSII 300
A+L+ G+QVH Q+V+ F+ +V + L+ MY KCG + +F+ KD+V WN++I
Sbjct: 405 AALELGKQVHGQVVKAGFETGCFVGNALLGMYFKCGSTDEANDVFEGIEEKDVVSWNTMI 464
Query: 301 SGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLV 360
+GYA++G G ++L +F M +GV PD++T+VGVLSACS++G + G E F SM Y V
Sbjct: 465 AGYARHGFGRQALVLFESMKKAGVKPDEITMVGVLSACSHSGLIDRGTEYFYSMDRDYNV 524
Query: 361 EPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAK 420
+P ++HY CM+DLLGRAG++E+A L+ MPF+P A WG+LLGA R H +L E AA+
Sbjct: 525 KPTSKHYTCMIDLLGRAGRLEEAENLMRNMPFDPGAASWGALLGASRIHGNTELGEKAAE 584
Query: 421 KLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFT 480
+ ++EP+N+G Y+LLSN+YA+ GR+ DV ++R MR+ V K G SW+EV+ K+H F+
Sbjct: 585 MVFKMEPQNSGMYVLLSNLYAASGRWVDVGKMRSKMREAGVQKVTGYSWVEVQNKIHTFS 644
Query: 481 GRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAY 540
DC HPE I LE++ +R GY + VLHDV+EEEK H L+YHSEKLAVA+
Sbjct: 645 VGDCF-HPEKDRIYAFLEELDLKMRREGYVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAF 703
Query: 541 GLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
G++ +P G PIRVMKNLRVC DCH+AIK ISK++GR IILRD++RFHHF +G+CSC DYW
Sbjct: 704 GILTIPAGRPIRVMKNLRVCQDCHNAIKHISKIVGRLIILRDSHRFHHFSEGICSCGDYW 763
Score = 231 bits (590), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 150/512 (29%), Positives = 246/512 (48%), Gaps = 63/512 (12%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MP R+ VS+ AM+ GY+ + A LF +MPE+++ SW VML G++R+ R+ +A +LF
Sbjct: 72 MPRRSSVSYNAMISGYLRNAKFSLARDLFDKMPERDLFSWNVMLTGYVRNRRLGEAHKLF 131
Query: 61 DMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARK 120
D+MP+KDVV+ M+ GY Q+G VDE RE+F++MP +N ISW +++ YV+N R+ AR+
Sbjct: 132 DLMPKKDVVSWNAMLSGYAQNGFVDEAREVFNKMPHRNSISWNGLLAAYVHNGRLKEARR 191
Query: 121 LFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKA 180
LFE +SW ++ GY + + DA +LF MP++ V++ N+MI G Q G++ +A
Sbjct: 192 LFESQSNWELISWNCLMGGYVKRNMLGDARQLFDRMPVRDVISWNTMISGYAQVGDLSQA 251
Query: 181 RVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASL 240
+ +F++ +D TW+ M+ Y + G E F M + + +S A L
Sbjct: 252 KRLFNESPIRDVFTWTAMVSGYVQNGMVDEARKYFDEM----------PVKNEISYNAML 301
Query: 241 ASLDHGRQ--VHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNS 298
A ++ + +L ++ + +IT Y + G + + + +FD +D V W +
Sbjct: 302 AGYVQYKKMVIAGELFEAMPCRNISSWNTMITGYGQNGGIAQARKLFDMMPQRDCVSWAA 361
Query: 299 IISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACS------------------- 339
IISGYAQ G E++L +F EM G + T LS C+
Sbjct: 362 IISGYAQNGHYEEALNMFVEMKRDGESSNRSTFSCALSTCADIAALELGKQVHGQVVKAG 421
Query: 340 ----------------YTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDA 383
G E ++FE ++ K +V T M+ R G A
Sbjct: 422 FETGCFVGNALLGMYFKCGSTDEANDVFEGIEEKDVVSWNT-----MIAGYARHGFGRQA 476
Query: 384 MKLIEAMP---FEPDAIIWGSLLGACRTHMKLDLAE---VAAKKLLQLEPKNAGPYILLS 437
+ L E+M +PD I +L AC +D + + ++P + Y +
Sbjct: 477 LVLFESMKKAGVKPDEITMVGVLSACSHSGLIDRGTEYFYSMDRDYNVKP-TSKHYTCMI 535
Query: 438 NIYASQGRFHDVAELRKNMRKRNVIKPPGCSW 469
++ GR + L +NM P SW
Sbjct: 536 DLLGRAGRLEEAENLMRNM----PFDPGAASW 563
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 100/375 (26%), Positives = 185/375 (49%), Gaps = 49/375 (13%)
Query: 31 QMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREI 90
+ + ++V+W + +R+ D A R+F+ MP + V+ M+ GY ++ + R++
Sbjct: 40 KFKDPDIVTWNKAISSHMRNGHCDSALRVFNSMPRRSSVSYNAMISGYLRNAKFSLARDL 99
Query: 91 FDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAW 150
FD+MP++++ SW M++GYV N R+ A KLF++MP+K+ VSW AML GY Q G + +A
Sbjct: 100 FDKMPERDLFSWNVMLTGYVRNRRLGEAHKLFDLMPKKDVVSWNAMLSGYAQNGFVDEAR 159
Query: 151 ELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELE 210
E+F MP ++ ++ N ++ NG +++AR +F+ + +W+ ++ Y ++ +
Sbjct: 160 EVFNKMPHRNSISWNGLLAAYVHNGRLKEARRLFESQSNWELISWNCLMGGYVKRNMLGD 219
Query: 211 VIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLIT 270
LF M VR DV + +I+
Sbjct: 220 ARQLFDRMP---VR------------------------------------DVISWNTMIS 240
Query: 271 MYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVT 330
Y + G+L + K +F+ +D+ W +++SGY Q G+ +++ K F EM + +
Sbjct: 241 GYAQVGDLSQAKRLFNESPIRDVFTWTAMVSGYVQNGMVDEARKYFDEMPVKNEISYNAM 300
Query: 331 LVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAM 390
L G + Y V G E+FE+M + + T M+ G+ G + A KL + M
Sbjct: 301 LAGYV---QYKKMVIAG-ELFEAMPCRNISSWNT-----MITGYGQNGGIAQARKLFDMM 351
Query: 391 PFEPDAIIWGSLLGA 405
P + D + W +++
Sbjct: 352 P-QRDCVSWAAIISG 365
Score = 45.8 bits (107), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 72/167 (43%), Gaps = 17/167 (10%)
Query: 288 FASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEG 347
F DIV WN IS + + G + +L+VF+ M + + + G L K
Sbjct: 41 FKDPDIVTWNKAISSHMRNGHCDSALRVFNSMPRRSSVSYNAMISGYLR----NAKFSLA 96
Query: 348 REIFESMKSKYLVEPKTEHYACMVDLLG--RAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
R++F+ M P+ + ++ V L G R ++ +A KL + MP + D + W ++L
Sbjct: 97 RDLFDKM-------PERDLFSWNVMLTGYVRNRRLGEAHKLFDLMP-KKDVVSWNAMLSG 148
Query: 406 CRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAEL 452
+ +D A K+ +N+ + L Y GR + L
Sbjct: 149 YAQNGFVDEAREVFNKMPH---RNSISWNGLLAAYVHNGRLKEARRL 192
>gi|297843734|ref|XP_002889748.1| hypothetical protein ARALYDRAFT_471032 [Arabidopsis lyrata subsp.
lyrata]
gi|297335590|gb|EFH66007.1| hypothetical protein ARALYDRAFT_471032 [Arabidopsis lyrata subsp.
lyrata]
Length = 595
Score = 608 bits (1569), Expect = e-171, Method: Compositional matrix adjust.
Identities = 322/612 (52%), Positives = 404/612 (66%), Gaps = 100/612 (16%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MPERN++SW ++ GY++ G I EA +F M E+NVVSWT + +D A LF
Sbjct: 72 MPERNIISWNGLLSGYMKNGEIDEAREVFDLMLERNVVSWTTL---------VDVAESLF 122
Query: 61 DMMPEKD----------VVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYV 110
MPEK+ +A+T+M+ G C++GRVDE REIFDEM +++VI+WTTM++GY
Sbjct: 123 WKMPEKNKMGESMMRVSYIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYG 182
Query: 111 NNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILG 170
NNR+D ARKLF+VMPEK EVSWT+MLM Y Q GRI+DA ELF+A S
Sbjct: 183 RNNRVDDARKLFDVMPEKTEVSWTSMLMSYVQNGRIEDAEELFEAKRRDS---------- 232
Query: 171 LGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSL 230
K++ FD M+E++DATW +IK +ER G+ELE +DLF LMQK+GVR FP+L
Sbjct: 233 --------KSKEGFDSMKERNDATWQMVIKFHERNGFELEALDLFVLMQKQGVRPTFPTL 284
Query: 231 ISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFAS 290
ISVLSVCASLASL HG+QVHAQLVRCQFDVD+YVASVL+TMYIKCGEL+K KLIFD F S
Sbjct: 285 ISVLSVCASLASLHHGKQVHAQLVRCQFDVDLYVASVLMTMYIKCGELLKSKLIFDRFPS 344
Query: 291 KDIVMWNSIISGYAQYGLGEKSLKVFHEM-FSSGVMPDDVTLVGVLSACSYTGKVKEGRE 349
KDI+MWNSIISGYA + LGE++LK+F+EM S P++VT V LSACSY G V+EG +
Sbjct: 345 KDIIMWNSIISGYASHSLGEEALKIFYEMPLSGSTEPNEVTFVATLSACSYAGMVEEGLK 404
Query: 350 IFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTH 409
IFESM+S +LGRAG+ +AM++I++M EPDA +WGSLLGACRTH
Sbjct: 405 IFESMES----------------VLGRAGRFNEAMEMIDSMIVEPDAAVWGSLLGACRTH 448
Query: 410 MKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSW 469
+LDLAE AKKL+++E +N+G + + G V K PGCSW
Sbjct: 449 SQLDLAEFCAKKLIEIETENSGSPTFM---HLKVGGLMLVR------------KSPGCSW 493
Query: 470 IEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSL 529
EV+ KVH FT SHPE I+++L+++ GLLREAGY PD S+ LHDVDEE
Sbjct: 494 NEVKFKVHAFTHGGICSHPEQESILKLLDELDGLLREAGYNPDCSYALHDVDEEG----- 548
Query: 530 RYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGD-CHSAIKLISKVMGREIILRDANRFHH 588
KNLRVC D C +AIK+ISKV EIILRDANRF H
Sbjct: 549 -------------------------KNLRVCSDICRAAIKIISKVKEMEIILRDANRFRH 583
Query: 589 FKDGLCSCRDYW 600
F++G CSC DYW
Sbjct: 584 FRNGECSCTDYW 595
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 117/225 (52%), Gaps = 17/225 (7%)
Query: 134 TAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDA 193
A + ++ G+I +A +LF + KSV + NSM+ + + A+++FD+M E++
Sbjct: 19 NAQITHLSRIGQIHEARKLFDSCDSKSVSSWNSMVAVYSASCMPRDAQLLFDEMPERNII 78
Query: 194 TWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQL 253
+W+G++ Y + G E ++F LM + V V++ +L+ V + + ++ +
Sbjct: 79 SWNGLLSGYMKNGEIDEAREVFDLMLERNV-VSWTTLVDVAE--SLFWKMPEKNKMGESM 135
Query: 254 VRCQFDVDVYVA-SVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKS 312
+R Y+A + +I K G + + + IFD + + ++ W ++++GY + + +
Sbjct: 136 MRVS-----YIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGRNNRVDDA 190
Query: 313 LKVFHEMFSSGVMPD--DVTLVGVLSACSYTGKVKEGREIFESMK 355
K+F VMP+ +V+ +L + G++++ E+FE+ +
Sbjct: 191 RKLF------DVMPEKTEVSWTSMLMSYVQNGRIEDAEELFEAKR 229
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/260 (21%), Positives = 109/260 (41%), Gaps = 60/260 (23%)
Query: 163 ASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEG 222
+N+ I L + G++ +AR +FD K ++W+ M+ VY + LF M +
Sbjct: 17 TANAQITHLSRIGQIHEARKLFDSCDSKSVSSWNSMVAVYSASCMPRDAQLLFDEMPERN 76
Query: 223 VRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGK 282
+ +++ L+S Y+K GE+ + +
Sbjct: 77 I-ISWNGLLS--------------------------------------GYMKNGEIDEAR 97
Query: 283 LIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYT- 341
+FD +++V W +++ + + +F +M M + + V ++ S
Sbjct: 98 EVFDLMLERNVVSWTTLV---------DVAESLFWKMPEKNKMGESMMRVSYIARTSMIH 148
Query: 342 -----GKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDA 396
G+V E REIF+ M + ++ + MV GR +V+DA KL + MP E
Sbjct: 149 GLCKEGRVDEAREIFDEMSERSVIT-----WTTMVTGYGRNNRVDDARKLFDVMP-EKTE 202
Query: 397 IIWGSLLGACRTHMKLDLAE 416
+ W S+L + + +++ AE
Sbjct: 203 VSWTSMLMSYVQNGRIEDAE 222
>gi|414885035|tpg|DAA61049.1| TPA: hypothetical protein ZEAMMB73_995105 [Zea mays]
Length = 824
Score = 608 bits (1568), Expect = e-171, Method: Compositional matrix adjust.
Identities = 281/599 (46%), Positives = 410/599 (68%), Gaps = 1/599 (0%)
Query: 2 PERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFD 61
PE++ VSW M+ YV G I EA LF E + +SW ++ G+++ S+I++A+++F+
Sbjct: 227 PEKDAVSWNGMLAAYVRNGRIQEARELFDSRTEWDAISWNALMAGYVQRSQIEEAQKMFN 286
Query: 62 MMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKL 121
MP++DVV+ MV GY + G + E R +FD P ++V +WT ++SGY N ++ A+++
Sbjct: 287 KMPQRDVVSWNTMVSGYARRGDMAEARRLFDVAPIRDVFTWTAIVSGYAQNGMLEEAKRV 346
Query: 122 FEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKAR 181
F+ MP+KN VSW AM+ Y Q +++A ELF AMP ++V + N+M+ G Q G + +AR
Sbjct: 347 FDAMPDKNAVSWNAMMAAYVQRRMMEEAKELFDAMPCRNVASWNTMLTGYAQAGMLDEAR 406
Query: 182 VVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLA 241
+F M +KD +W+ M+ Y + G+ E + LF M + G VN + VLS CA +A
Sbjct: 407 AIFGMMPQKDAVSWAAMLAAYSQIGFSEETLQLFKEMGRCGEWVNRSAFACVLSTCADIA 466
Query: 242 SLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIIS 301
+L+ G Q+H++L++ + V +V + L+ MY KCG + + F+ +D+V WN++I+
Sbjct: 467 ALECGMQLHSRLIKAGYGVGCFVGNALLAMYFKCGSMEEAHSAFEEMEERDVVSWNTMIA 526
Query: 302 GYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVE 361
GYA++G G+++L+VF M + PDD+TLVGVL+ACS++G V++G F SM + V
Sbjct: 527 GYARHGFGKEALEVFDTMRKTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHRDFGVA 586
Query: 362 PKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKK 421
K EHY CM+DLLGRAG++++A+ L++ MPFEPD+ +WG+LLGA R H +L AA+K
Sbjct: 587 TKPEHYTCMIDLLGRAGRLDEAVNLMKDMPFEPDSTMWGALLGASRIHRNSELGRNAAEK 646
Query: 422 LLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTG 481
+ +LEP+NAG Y+LLSNIYAS G++ DV ++R M +R V K PG SWIEV+ KVH F+
Sbjct: 647 IFELEPENAGMYVLLSNIYASSGKWRDVDKMRHIMHERGVKKVPGFSWIEVQNKVHTFSV 706
Query: 482 RDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYG 541
D V HPE I LE + +++AGY + VLHDV+EEEK H L+YHSEKLAVAYG
Sbjct: 707 GDSV-HPEREDIYAFLEDLDIRMKKAGYVSATDMVLHDVEEEEKEHMLKYHSEKLAVAYG 765
Query: 542 LVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
++K+P G PIRV+KNLRVC DCH+A K IS + GR IILRD+NRFHHF+DG CSC DYW
Sbjct: 766 ILKIPPGRPIRVIKNLRVCRDCHTAFKCISAIEGRLIILRDSNRFHHFRDGSCSCGDYW 824
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 115/415 (27%), Positives = 205/415 (49%), Gaps = 22/415 (5%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MP R+ ++ M+ GY G + +A + F +P + S+ +L S + D R LF
Sbjct: 133 MPRRSTSTYNTMLAGYAANGRLPQALSFFRSIPRPDSFSYNTLLHALGVSSSLADVRALF 192
Query: 61 DMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARK 120
D MP KD V+ M+ + G V R FD P+K+ +SW M++ YV N RI AR+
Sbjct: 193 DEMPVKDSVSYNVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRIQEARE 252
Query: 121 LFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKA 180
LF+ E + +SW A++ GY Q +I++A ++F MP + VV+ N+M+ G + G++ +A
Sbjct: 253 LFDSRTEWDAISWNALMAGYVQRSQIEEAQKMFNKMPQRDVVSWNTMVSGYARRGDMAEA 312
Query: 181 RVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASL 240
R +FD +D TW+ ++ Y + G E +F M + N S ++++
Sbjct: 313 RRLFDVAPIRDVFTWTAIVSGYAQNGMLEEAKRVFDAMPDK----NAVSWNAMMAAYVQR 368
Query: 241 ASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSII 300
++ +++ + C+ +V + ++T Y + G L + + IF KD V W +++
Sbjct: 369 RMMEEAKELFDAMP-CR---NVASWNTMLTGYAQAGMLDEARAIFGMMPQKDAVSWAAML 424
Query: 301 SGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESM-KSKYL 359
+ Y+Q G E++L++F EM G + VLS C+ ++ G ++ + K+ Y
Sbjct: 425 AAYSQIGFSEETLQLFKEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHSRLIKAGYG 484
Query: 360 VEPKTEHYACMVD-----LLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTH 409
V C V + + G +E+A E M E D + W +++ H
Sbjct: 485 V-------GCFVGNALLAMYFKCGSMEEAHSAFEEME-ERDVVSWNTMIAGYARH 531
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 130/526 (24%), Positives = 246/526 (46%), Gaps = 40/526 (7%)
Query: 2 PERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFD 61
P+ V+ + ++ G + +A LF MP ++ ++ ML G+ + R+ A F
Sbjct: 103 PDMEVIRRNRAITAHMRAGRVPDAERLFAAMPRRSTSTYNTMLAGYAANGRLPQALSFFR 162
Query: 62 MMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKL 121
+P D + ++ + + R +FDEMP K+ +S+ MIS + N+ + +AR
Sbjct: 163 SIPRPDSFSYNTLLHALGVSSSLADVRALFDEMPVKDSVSYNVMISSHANHGLVSLARHY 222
Query: 122 FEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKAR 181
F++ PEK+ VSW ML Y + GRIQ+A ELF + ++ N+++ G Q ++++A+
Sbjct: 223 FDLAPEKDAVSWNGMLAAYVRNGRIQEARELFDSRTEWDAISWNALMAGYVQRSQIEEAQ 282
Query: 182 VVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLA 241
+F++M ++D +W+ M+ Y R+G E LF + +R F + +++S A
Sbjct: 283 KMFNKMPQRDVVSWNTMVSGYARRGDMAEARRLFDVAP---IRDVF-TWTAIVSGYAQNG 338
Query: 242 SLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIIS 301
L+ ++V + D + + ++ Y++ + + K +FD +++ WN++++
Sbjct: 339 MLEEAKRVFDAMP----DKNAVSWNAMMAAYVQRRMMEEAKELFDAMPCRNVASWNTMLT 394
Query: 302 GYAQYGLGEKSLKVFHEMFSSGVMP--DDVTLVGVLSACSYTGKVKEGREIFESM-KSKY 358
GYAQ G+ +++ +F G+MP D V+ +L+A S G +E ++F+ M +
Sbjct: 395 GYAQAGMLDEARAIF------GMMPQKDAVSWAAMLAAYSQIGFSEETLQLFKEMGRCGE 448
Query: 359 LVEPKTEHYACMVDLLGRAGQVEDAMKLIEAM---PFEPDAIIWGSLLGACRTHMKLDLA 415
V +AC++ +E M+L + + + +LL + K
Sbjct: 449 WVNRSA--FACVLSTCADIAALECGMQLHSRLIKAGYGVGCFVGNALLA---MYFKCGSM 503
Query: 416 EVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIE---- 471
E A ++E ++ + + YA G + E+ MRK + KP + +
Sbjct: 504 EEAHSAFEEMEERDVVSWNTMIAGYARHGFGKEALEVFDTMRKTST-KPDDITLVGVLAA 562
Query: 472 ------VEKKVHMFTG--RD--CVSHPEHPMIMRMLEKIGGLLREA 507
VEK + F RD + PEH M L G L EA
Sbjct: 563 CSHSGLVEKGISYFYSMHRDFGVATKPEHYTCMIDLLGRAGRLDEA 608
>gi|356511265|ref|XP_003524347.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 750
Score = 607 bits (1565), Expect = e-171, Method: Compositional matrix adjust.
Identities = 283/631 (44%), Positives = 413/631 (65%), Gaps = 32/631 (5%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MPE++VVSW AM+ GYV G + EA +F +MP KN +SW +L ++R R+++ARRLF
Sbjct: 121 MPEKDVVSWNAMLSGYVRSGHVDEARDVFDRMPHKNSISWNGLLAAYVRSGRLEEARRLF 180
Query: 61 -------------------------------DMMPEKDVVAQTNMVLGYCQDGRVDEGRE 89
D +P +D+++ M+ GY QDG + + R
Sbjct: 181 ESKSDWELISCNCLMGGYVKRNMLGDARQLFDQIPVRDLISWNTMISGYAQDGDLSQARR 240
Query: 90 IFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDA 149
+F+E P ++V +WT M+ YV + +D AR++F+ MP+K E+S+ M+ GY Q R+
Sbjct: 241 LFEESPVRDVFTWTAMVYAYVQDGMLDEARRVFDEMPQKREMSYNVMIAGYAQYKRMDMG 300
Query: 150 WELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYEL 209
ELF+ MP ++ + N MI G QNG++ +AR +FD M ++D +W+ +I Y + G
Sbjct: 301 RELFEEMPFPNIGSWNIMISGYCQNGDLAQARNLFDMMPQRDSVSWAAIIAGYAQNGLYE 360
Query: 210 EVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLI 269
E +++ M+++G +N + LS CA +A+L+ G+QVH Q+VR ++ V + L+
Sbjct: 361 EAMNMLVEMKRDGESLNRSTFCCALSACADIAALELGKQVHGQVVRTGYEKGCLVGNALV 420
Query: 270 TMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDV 329
MY KCG + + +F KDIV WN++++GYA++G G ++L VF M ++GV PD++
Sbjct: 421 GMYCKCGCIDEAYDVFQGVQHKDIVSWNTMLAGYARHGFGRQALTVFESMITAGVKPDEI 480
Query: 330 TLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEA 389
T+VGVLSACS+TG G E F SM Y + P ++HYACM+DLLGRAG +E+A LI
Sbjct: 481 TMVGVLSACSHTGLTDRGTEYFHSMNKDYGITPNSKHYACMIDLLGRAGCLEEAQNLIRN 540
Query: 390 MPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDV 449
MPFEPDA WG+LLGA R H ++L E AA+ + ++EP N+G Y+LLSN+YA+ GR+ DV
Sbjct: 541 MPFEPDAATWGALLGASRIHGNMELGEQAAEMVFKMEPHNSGMYVLLSNLYAASGRWVDV 600
Query: 450 AELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGY 509
+++R MR+ V K PG SW+EV+ K+H FT DC HPE I LE++ ++ GY
Sbjct: 601 SKMRLKMRQIGVQKTPGYSWVEVQNKIHTFTVGDCF-HPEKGRIYAFLEELDLKMKHEGY 659
Query: 510 CPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKL 569
+ VLHDV+EEEK H L+YHSEKLAVA+G++ +P G PIRVMKNLRVC DCH+AIK
Sbjct: 660 VSSTKLVLHDVEEEEKKHMLKYHSEKLAVAFGILTMPSGKPIRVMKNLRVCEDCHNAIKH 719
Query: 570 ISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
ISK++GR II+RD++R+HHF +G+CSCRDYW
Sbjct: 720 ISKIVGRLIIVRDSHRYHHFSEGICSCRDYW 750
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 130/411 (31%), Positives = 230/411 (55%), Gaps = 14/411 (3%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MP RN VS+ AM+ GY+ + A LF +MP K++ SW +ML G+ R+ R+ DAR LF
Sbjct: 59 MPLRNSVSYNAMISGYLRNAKFSLARDLFDKMPHKDLFSWNLMLTGYARNRRLRDARMLF 118
Query: 61 DMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARK 120
D MPEKDVV+ M+ GY + G VDE R++FD MP KN ISW +++ YV + R++ AR+
Sbjct: 119 DSMPEKDVVSWNAMLSGYVRSGHVDEARDVFDRMPHKNSISWNGLLAAYVRSGRLEEARR 178
Query: 121 LFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKA 180
LFE + +S ++ GY + + DA +LF +P++ +++ N+MI G Q+G++ +A
Sbjct: 179 LFESKSDWELISCNCLMGGYVKRNMLGDARQLFDQIPVRDLISWNTMISGYAQDGDLSQA 238
Query: 181 RVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLM-QKEGVRVNFPSLISVLSVCAS 239
R +F++ +D TW+ M+ Y + G E +F M QK + N +++ A
Sbjct: 239 RRLFEESPVRDVFTWTAMVYAYVQDGMLDEARRVFDEMPQKREMSYNV-----MIAGYAQ 293
Query: 240 LASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSI 299
+D GR++ ++ ++ +++I+ Y + G+L + + +FD +D V W +I
Sbjct: 294 YKRMDMGRELFEEMPF----PNIGSWNIMISGYCQNGDLAQARNLFDMMPQRDSVSWAAI 349
Query: 300 ISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIF-ESMKSKY 358
I+GYAQ GL E+++ + EM G + T LSAC+ ++ G+++ + +++ Y
Sbjct: 350 IAGYAQNGLYEEAMNMLVEMKRDGESLNRSTFCCALSACADIAALELGKQVHGQVVRTGY 409
Query: 359 LVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTH 409
E +V + + G +++A + + + + D + W ++L H
Sbjct: 410 --EKGCLVGNALVGMYCKCGCIDEAYDVFQGVQHK-DIVSWNTMLAGYARH 457
>gi|48716903|dbj|BAD23598.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
Length = 755
Score = 606 bits (1563), Expect = e-171, Method: Compositional matrix adjust.
Identities = 281/599 (46%), Positives = 403/599 (67%), Gaps = 1/599 (0%)
Query: 2 PERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFD 61
PE++ VSW M+ YV G + EA LF E +V+SW ++ G+++ ++ +AR LFD
Sbjct: 158 PEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVISWNALMSGYVQWGKMSEARELFD 217
Query: 62 MMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKL 121
MP +DVV+ MV GY + G + E R +FD P ++V +WT ++SGY N ++ AR++
Sbjct: 218 RMPGRDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVFTWTAVVSGYAQNGMLEEARRV 277
Query: 122 FEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKAR 181
F+ MPE+N VSW AM+ Y Q + +A ELF MP ++V + N+M+ G Q G +++A+
Sbjct: 278 FDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMMPCRNVASWNTMLTGYAQAGMLEEAK 337
Query: 182 VVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLA 241
VFD M +KD +W+ M+ Y + G E + LF M + G VN + VLS CA +A
Sbjct: 338 AVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIA 397
Query: 242 SLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIIS 301
+L+ G Q+H +L+R + V +V + L+ MY KCG + + F+ +D+V WN++I+
Sbjct: 398 ALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIA 457
Query: 302 GYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVE 361
GYA++G G+++L++F M ++ PDD+TLVGVL+ACS++G V++G F SM + V
Sbjct: 458 GYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVT 517
Query: 362 PKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKK 421
K EHY CM+DLLGRAG++ +A L++ MPFEPD+ +WG+LLGA R H +L AA+K
Sbjct: 518 AKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIHRNPELGRSAAEK 577
Query: 422 LLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTG 481
+ +LEP+NAG Y+LLSNIYAS G++ D ++R M +R V K PG SWIEV+ KVH F+
Sbjct: 578 IFELEPENAGMYVLLSNIYASSGKWRDARKMRVMMEERGVKKVPGFSWIEVQNKVHTFSA 637
Query: 482 RDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYG 541
DCV HPE I LE + +++AGY + VLHDV+EEEK H L+YHSEKLAVAYG
Sbjct: 638 GDCV-HPEKEKIYAFLEDLDMRMKKAGYVSATDMVLHDVEEEEKEHMLKYHSEKLAVAYG 696
Query: 542 LVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
++ +P G PIRV+KNLRVCGDCH+A K IS + GR I+LRD+NRFHHF+ G CSC DYW
Sbjct: 697 ILNIPPGRPIRVIKNLRVCGDCHNAFKYISAIEGRLILLRDSNRFHHFRGGSCSCGDYW 755
Score = 195 bits (496), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 118/410 (28%), Positives = 207/410 (50%), Gaps = 12/410 (2%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MP R+ ++ AM+ GY G + A +LF +P + S+ +L S + DAR LF
Sbjct: 64 MPRRSTSTYNAMLAGYSANGRLPLAASLFRAIPRPDNYSYNTLLHALAVSSSLADARGLF 123
Query: 61 DMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARK 120
D MP +D V M+ + G V R FD P+K+ +SW M++ YV N R++ AR
Sbjct: 124 DEMPVRDSVTYNVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARG 183
Query: 121 LFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKA 180
LF E + +SW A++ GY Q G++ +A ELF MP + VV+ N M+ G + G++ +A
Sbjct: 184 LFNSRTEWDVISWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEA 243
Query: 181 RVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASL 240
R +FD +D TW+ ++ Y + G E +F M + N S ++++
Sbjct: 244 RRLFDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPER----NAVSWNAMVAAYIQR 299
Query: 241 ASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSII 300
+D +++ ++ C+ +V + ++T Y + G L + K +FD KD V W +++
Sbjct: 300 RMMDEAKELF-NMMPCR---NVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAML 355
Query: 301 SGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESM-KSKYL 359
+ Y+Q G E++L++F EM G + VLS C+ ++ G ++ + ++ Y
Sbjct: 356 AAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYG 415
Query: 360 VEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTH 409
V + ++ + + G +EDA E M E D + W +++ H
Sbjct: 416 VGCFVGN--ALLAMYFKCGNMEDARNAFEEME-ERDVVSWNTMIAGYARH 462
>gi|125605235|gb|EAZ44271.1| hypothetical protein OsJ_28890 [Oryza sativa Japonica Group]
Length = 630
Score = 605 bits (1561), Expect = e-170, Method: Compositional matrix adjust.
Identities = 281/599 (46%), Positives = 403/599 (67%), Gaps = 1/599 (0%)
Query: 2 PERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFD 61
PE++ VSW M+ YV G + EA LF E +V+SW ++ G+++ ++ +AR LFD
Sbjct: 33 PEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVISWNALMSGYVQWGKMSEARELFD 92
Query: 62 MMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKL 121
MP +DVV+ MV GY + G + E R +FD P ++V +WT ++SGY N ++ AR++
Sbjct: 93 RMPGRDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVFTWTAVVSGYAQNGMLEEARRV 152
Query: 122 FEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKAR 181
F+ MPE+N VSW AM+ Y Q + +A ELF MP ++V + N+M+ G Q G +++A+
Sbjct: 153 FDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMMPCRNVASWNTMLTGYAQAGMLEEAK 212
Query: 182 VVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLA 241
VFD M +KD +W+ M+ Y + G E + LF M + G VN + VLS CA +A
Sbjct: 213 AVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIA 272
Query: 242 SLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIIS 301
+L+ G Q+H +L+R + V +V + L+ MY KCG + + F+ +D+V WN++I+
Sbjct: 273 ALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIA 332
Query: 302 GYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVE 361
GYA++G G+++L++F M ++ PDD+TLVGVL+ACS++G V++G F SM + V
Sbjct: 333 GYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVT 392
Query: 362 PKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKK 421
K EHY CM+DLLGRAG++ +A L++ MPFEPD+ +WG+LLGA R H +L AA+K
Sbjct: 393 AKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIHRNPELGRSAAEK 452
Query: 422 LLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTG 481
+ +LEP+NAG Y+LLSNIYAS G++ D ++R M +R V K PG SWIEV+ KVH F+
Sbjct: 453 IFELEPENAGMYVLLSNIYASSGKWRDARKMRVMMEERGVKKVPGFSWIEVQNKVHTFSA 512
Query: 482 RDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYG 541
DCV HPE I LE + +++AGY + VLHDV+EEEK H L+YHSEKLAVAYG
Sbjct: 513 GDCV-HPEKEKIYAFLEDLDMRMKKAGYVSATDMVLHDVEEEEKEHMLKYHSEKLAVAYG 571
Query: 542 LVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
++ +P G PIRV+KNLRVCGDCH+A K IS + GR I+LRD+NRFHHF+ G CSC DYW
Sbjct: 572 ILNIPPGRPIRVIKNLRVCGDCHNAFKYISAIEGRLILLRDSNRFHHFRGGSCSCGDYW 630
>gi|125563252|gb|EAZ08632.1| hypothetical protein OsI_30906 [Oryza sativa Indica Group]
Length = 755
Score = 605 bits (1560), Expect = e-170, Method: Compositional matrix adjust.
Identities = 280/599 (46%), Positives = 402/599 (67%), Gaps = 1/599 (0%)
Query: 2 PERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFD 61
PE++ VSW M+ YV G + EA LF E + +SW ++ G+++ ++ +AR LFD
Sbjct: 158 PEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDAISWNALMSGYVQWGKMSEARELFD 217
Query: 62 MMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKL 121
MP +DVV+ MV GY + G + E R +FD P ++V +WT ++SGY N ++ AR++
Sbjct: 218 RMPGRDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVFTWTAVVSGYAQNGMLEEARRV 277
Query: 122 FEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKAR 181
F+ MPE+N VSW AM+ Y Q + +A ELF MP ++V + N+M+ G Q G +++A+
Sbjct: 278 FDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMMPCRNVASWNTMLTGYAQAGMLEEAK 337
Query: 182 VVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLA 241
VFD M +KD +W+ M+ Y + G E + LF M + G VN + VLS CA +A
Sbjct: 338 AVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIA 397
Query: 242 SLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIIS 301
+L+ G Q+H +L+R + V +V + L+ MY KCG + + F+ +D+V WN++I+
Sbjct: 398 ALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIA 457
Query: 302 GYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVE 361
GYA++G G+++L++F M ++ PDD+TLVGVL+ACS++G V++G F SM + V
Sbjct: 458 GYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVT 517
Query: 362 PKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKK 421
K EHY CM+DLLGRAG++ +A L++ MPFEPD+ +WG+LLGA R H +L AA+K
Sbjct: 518 AKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIHRNPELGRSAAEK 577
Query: 422 LLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTG 481
+ +LEP+NAG Y+LLSNIYAS G++ D ++R M +R V K PG SWIEV+ KVH F+
Sbjct: 578 IFELEPENAGMYVLLSNIYASSGKWRDARKMRVMMEERGVKKVPGFSWIEVQNKVHTFSA 637
Query: 482 RDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYG 541
DCV HPE I LE + +++AGY + VLHDV+EEEK H L+YHSEKLAVAYG
Sbjct: 638 GDCV-HPEKEKIYAFLEDLDMRMKKAGYVSATDMVLHDVEEEEKEHMLKYHSEKLAVAYG 696
Query: 542 LVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
++ +P G PIRV+KNLRVCGDCH+A K IS + GR I+LRD+NRFHHF+ G CSC DYW
Sbjct: 697 ILNIPPGRPIRVIKNLRVCGDCHNAFKYISAIEGRLILLRDSNRFHHFRGGSCSCGDYW 755
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 118/410 (28%), Positives = 207/410 (50%), Gaps = 12/410 (2%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MP R+ ++ AM+ GY G + A +LF +P + S+ +L S + DAR LF
Sbjct: 64 MPRRSTSTYNAMLAGYSANGRLPLAASLFRAIPRPDNYSYNTLLHALAVSSSLADARGLF 123
Query: 61 DMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARK 120
D MP +D V M+ + G V R FD P+K+ +SW M++ YV N R++ AR
Sbjct: 124 DEMPVRDSVTYNVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARG 183
Query: 121 LFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKA 180
LF E + +SW A++ GY Q G++ +A ELF MP + VV+ N M+ G + G++ +A
Sbjct: 184 LFNSRTEWDAISWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEA 243
Query: 181 RVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASL 240
R +FD +D TW+ ++ Y + G E +F M + N S ++++
Sbjct: 244 RRLFDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPER----NAVSWNAMVAAYIQR 299
Query: 241 ASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSII 300
+D +++ ++ C+ +V + ++T Y + G L + K +FD KD V W +++
Sbjct: 300 RMMDEAKELF-NMMPCR---NVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAML 355
Query: 301 SGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESM-KSKYL 359
+ Y+Q G E++L++F EM G + VLS C+ ++ G ++ + ++ Y
Sbjct: 356 AAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYG 415
Query: 360 VEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTH 409
V + ++ + + G +EDA E M E D + W +++ H
Sbjct: 416 VGCFVGN--ALLAMYFKCGNMEDARNAFEEME-ERDVVSWNTMIAGYARH 462
>gi|297609253|ref|NP_001062888.2| Os09g0327200 [Oryza sativa Japonica Group]
gi|255678787|dbj|BAF24802.2| Os09g0327200 [Oryza sativa Japonica Group]
Length = 739
Score = 559 bits (1440), Expect = e-156, Method: Compositional matrix adjust.
Identities = 265/579 (45%), Positives = 385/579 (66%), Gaps = 5/579 (0%)
Query: 2 PERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFD 61
PE++ VSW M+ YV G + EA LF E +V+SW ++ G+++ ++ +AR LFD
Sbjct: 158 PEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVISWNALMSGYVQWGKMSEARELFD 217
Query: 62 MMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKL 121
MP +DVV+ MV GY + G + E R +FD P ++V +WT ++SGY N ++ AR++
Sbjct: 218 RMPGRDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVFTWTAVVSGYAQNGMLEEARRV 277
Query: 122 FEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKAR 181
F+ MPE+N VSW AM+ Y Q + +A ELF MP ++V + N+M+ G Q G +++A+
Sbjct: 278 FDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMMPCRNVASWNTMLTGYAQAGMLEEAK 337
Query: 182 VVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLA 241
VFD M +KD +W+ M+ Y + G E + LF M + G VN + VLS CA +A
Sbjct: 338 AVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIA 397
Query: 242 SLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIIS 301
+L+ G Q+H +L+R + V +V + L+ MY KCG + + F+ +D+V WN++I+
Sbjct: 398 ALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIA 457
Query: 302 GYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVE 361
GYA++G G+++L++F M ++ PDD+TLVGVL+ACS++G V++G F SM + V
Sbjct: 458 GYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVT 517
Query: 362 PKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKK 421
K EHY CM+DLLGRAG++ +A L++ MPFEPD+ +WG+LLGA R H +L AA+K
Sbjct: 518 AKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIHRNPELGRSAAEK 577
Query: 422 LLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTG 481
+ +LEP+NAG Y+LLSNIYAS G++ D ++R M +R V K PG SWIEV+ KVH F+
Sbjct: 578 IFELEPENAGMYVLLSNIYASSGKWRDARKMRVMMEERGVKKVPGFSWIEVQNKVHTFSA 637
Query: 482 RDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYG 541
DCV HPE I LE + +++AGY + VLHDV+EEEK H L+YHSEKLAVAYG
Sbjct: 638 GDCV-HPEKEKIYAFLEDLDMRMKKAGYVSATDMVLHDVEEEEKEHMLKYHSEKLAVAYG 696
Query: 542 LVKLPEGVPIRVMKNLRVCGDCHSA----IKLISKVMGR 576
++ +P G PIRV+KNLRVCGDCH+A I+L+ KV GR
Sbjct: 697 ILNIPPGRPIRVIKNLRVCGDCHNAFKAWIELMLKVSGR 735
Score = 195 bits (496), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 118/410 (28%), Positives = 207/410 (50%), Gaps = 12/410 (2%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MP R+ ++ AM+ GY G + A +LF +P + S+ +L S + DAR LF
Sbjct: 64 MPRRSTSTYNAMLAGYSANGRLPLAASLFRAIPRPDNYSYNTLLHALAVSSSLADARGLF 123
Query: 61 DMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARK 120
D MP +D V M+ + G V R FD P+K+ +SW M++ YV N R++ AR
Sbjct: 124 DEMPVRDSVTYNVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARG 183
Query: 121 LFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKA 180
LF E + +SW A++ GY Q G++ +A ELF MP + VV+ N M+ G + G++ +A
Sbjct: 184 LFNSRTEWDVISWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEA 243
Query: 181 RVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASL 240
R +FD +D TW+ ++ Y + G E +F M + N S ++++
Sbjct: 244 RRLFDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPER----NAVSWNAMVAAYIQR 299
Query: 241 ASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSII 300
+D +++ ++ C+ +V + ++T Y + G L + K +FD KD V W +++
Sbjct: 300 RMMDEAKELF-NMMPCR---NVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAML 355
Query: 301 SGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESM-KSKYL 359
+ Y+Q G E++L++F EM G + VLS C+ ++ G ++ + ++ Y
Sbjct: 356 AAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYG 415
Query: 360 VEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTH 409
V + ++ + + G +EDA E M E D + W +++ H
Sbjct: 416 VGCFVGN--ALLAMYFKCGNMEDARNAFEEME-ERDVVSWNTMIAGYARH 462
>gi|224121210|ref|XP_002318526.1| predicted protein [Populus trichocarpa]
gi|222859199|gb|EEE96746.1| predicted protein [Populus trichocarpa]
Length = 552
Score = 552 bits (1422), Expect = e-154, Method: Compositional matrix adjust.
Identities = 260/558 (46%), Positives = 371/558 (66%), Gaps = 6/558 (1%)
Query: 43 MLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISW 102
M+ G++R+ + D AR LFD MPE+D+ + M+ GY ++ + R +F+ MP+++++SW
Sbjct: 1 MISGYLRNHKFDLARDLFDKMPERDLFSWNVMLTGYVRNRDLKTARALFERMPERDIVSW 60
Query: 103 TTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVV 162
M+SGY N +D AR++F MP KN +SW +L Y Q GRI+DA LF++ ++V
Sbjct: 61 NAMLSGYAQNGFVDEAREIFYKMPLKNGISWNGLLAAYVQNGRIEDAKRLFESKMDWTLV 120
Query: 163 ASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEG 222
+ N ++ G V+K R +FD M ++D +WS MI Y + G E + F MQ++
Sbjct: 121 SWNCLMGGF-----VRKRRNLFDNMPQRDSISWSAMIAGYSQNGCSEEALHFFVEMQRDC 175
Query: 223 VRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGK 282
R+N S LS C+++A+L+ GRQ+H +LV+ + YV + L+ MY KCG + + +
Sbjct: 176 ERLNRSSFTCALSTCSNIAALELGRQLHCRLVKAGYQTGWYVGNALLAMYCKCGSIDEAR 235
Query: 283 LIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTG 342
F KD+V WN++I GYA++G GE++L VF M ++G+ PDD T+V VL+ACS+ G
Sbjct: 236 DAFQEILEKDVVSWNTMIHGYARHGFGEEALTVFELMKTTGIRPDDATMVSVLAACSHAG 295
Query: 343 KVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSL 402
V +G E F SM Y + K HY CMVDLLGRAGQ+E+A L++ MPFEPDA WG+L
Sbjct: 296 LVDQGSEYFYSMNRDYGITAKLVHYTCMVDLLGRAGQLEEAQNLMKNMPFEPDAATWGAL 355
Query: 403 LGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVI 462
LGA R H +L E AA+ + ++EP N+G YILLS +YA+ GR+ D ++R MR + V
Sbjct: 356 LGASRIHGNTELGEKAAQIIFEMEPHNSGMYILLSKLYAASGRWSDAGKMRLEMRNKGVK 415
Query: 463 KPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDE 522
K PG SW+EV+ K+H F D SHP I LE++ L++ GY ++ V HDV+E
Sbjct: 416 KVPGYSWLEVQNKIHTFKVGD-TSHPHTDKIYTFLEEMDLKLKQEGYISSTNLVFHDVEE 474
Query: 523 EEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRD 582
EEKVH L+YHSEKLAVAYG++ +P G PIRV+KNLRVC DCH+AIK ISK++GR IILRD
Sbjct: 475 EEKVHMLKYHSEKLAVAYGILYIPAGRPIRVIKNLRVCEDCHNAIKYISKIVGRLIILRD 534
Query: 583 ANRFHHFKDGLCSCRDYW 600
+RFH+F+ G CSCRD+W
Sbjct: 535 NHRFHYFEGGSCSCRDFW 552
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 97/364 (26%), Positives = 178/364 (48%), Gaps = 51/364 (14%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MPER++ SW M+ GYV + A LF +MPE+++VSW ML G+ ++ +D+AR +F
Sbjct: 21 MPERDLFSWNVMLTGYVRNRDLKTARALFERMPERDIVSWNAMLSGYAQNGFVDEAREIF 80
Query: 61 DMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARK 120
MP K+ ++ ++ Y Q+GR+++ + +F+ ++SW ++ G+V R
Sbjct: 81 YKMPLKNGISWNGLLAAYVQNGRIEDAKRLFESKMDWTLVSWNCLMGGFVRKR-----RN 135
Query: 121 LFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKS------------VVASNSMI 168
LF+ MP+++ +SW+AM+ GY+Q G ++A F M SN
Sbjct: 136 LFDNMPQRDSISWSAMIAGYSQNGCSEEALHFFVEMQRDCERLNRSSFTCALSTCSNIAA 195
Query: 169 LGLGQN---------------------------GEVQKARVVFDQMREKDDATWSGMIKV 201
L LG+ G + +AR F ++ EKD +W+ MI
Sbjct: 196 LELGRQLHCRLVKAGYQTGWYVGNALLAMYCKCGSIDEARDAFQEILEKDVVSWNTMIHG 255
Query: 202 YERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVD 261
Y R G+ E + +F LM+ G+R + +++SVL+ C+ +D G + + R + +
Sbjct: 256 YARHGFGEEALTVFELMKTTGIRPDDATMVSVLAACSHAGLVDQGSEYFYSMNR-DYGIT 314
Query: 262 VYVA--SVLITMYIKCGELVKGKLIFDNFA-SKDIVMWNSIISGYAQYG---LGEKSLKV 315
+ + ++ + + G+L + + + N D W +++ +G LGEK+ ++
Sbjct: 315 AKLVHYTCMVDLLGRAGQLEEAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKAAQI 374
Query: 316 FHEM 319
EM
Sbjct: 375 IFEM 378
>gi|356507248|ref|XP_003522381.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Glycine max]
Length = 635
Score = 550 bits (1416), Expect = e-153, Method: Compositional matrix adjust.
Identities = 277/597 (46%), Positives = 379/597 (63%), Gaps = 2/597 (0%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRD-SRIDDARRLFDMM 63
NV++ ++ YV G I A +F M K+ V+W +L F + + AR+LF+ +
Sbjct: 40 NVIASNKLIASYVRCGDIDSAVRVFEDMKVKSTVTWNSILAAFAKKPGHFEYARQLFEKI 99
Query: 64 PEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFE 123
P+ + V+ M+ + V + R FD MP K+V SW TMIS + AR+LF
Sbjct: 100 PQPNTVSYNIMLACHWHHLGVHDARGFFDSMPLKDVASWNTMISALAQVGLMGEARRLFS 159
Query: 124 VMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVV 183
MPEKN VSW+AM+ GY CG + A E F A PM+SV+ +MI G + G V+ A +
Sbjct: 160 AMPEKNCVSWSAMVSGYVACGDLDAAVECFYAAPMRSVITWTAMITGYMKFGRVELAERL 219
Query: 184 FDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASL 243
F +M + TW+ MI Y G + + LF M + GV+ N SL SVL C++L++L
Sbjct: 220 FQEMSMRTLVTWNAMIAGYVENGRAEDGLRLFRTMLETGVKPNALSLTSVLLGCSNLSAL 279
Query: 244 DHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGY 303
G+QVH + +C D + L++MY KCG+L +F KD+V WN++ISGY
Sbjct: 280 QLGKQVHQLVCKCPLSSDTTAGTSLVSMYSKCGDLKDAWELFIQIPRKDVVCWNAMISGY 339
Query: 304 AQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPK 363
AQ+G G+K+L++F EM G+ PD +T V VL AC++ G V G + F +M+ + +E K
Sbjct: 340 AQHGAGKKALRLFDEMKKEGLKPDWITFVAVLLACNHAGLVDLGVQYFNTMRRDFGIETK 399
Query: 364 TEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLL 423
EHYACMVDLLGRAG++ +A+ LI++MPF+P I+G+LLGACR H L+LAE AAK LL
Sbjct: 400 PEHYACMVDLLGRAGKLSEAVDLIKSMPFKPHPAIYGTLLGACRIHKNLNLAEFAAKNLL 459
Query: 424 QLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRD 483
+L+P A Y+ L+N+YA+Q R+ VA +R++M+ NV+K PG SWIE+ VH F D
Sbjct: 460 ELDPTIATGYVQLANVYAAQNRWDHVASIRRSMKDNNVVKIPGYSWIEINSVVHGFRSSD 519
Query: 484 CVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLV 543
+ HPE I L+ + ++ AGY PD FVLHDV EE K L +HSEKLA+A+GL+
Sbjct: 520 RL-HPELASIHEKLKDLEKKMKLAGYVPDLEFVLHDVGEELKEQLLLWHSEKLAIAFGLL 578
Query: 544 KLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
K+P GVPIRV KNLRVCGDCHSA K IS + GREII+RD RFHHFKDG CSCRDYW
Sbjct: 579 KVPLGVPIRVFKNLRVCGDCHSATKYISTIEGREIIVRDTTRFHHFKDGFCSCRDYW 635
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 141/294 (47%), Gaps = 39/294 (13%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
+P+ N VS+ M+ + + +A F MP K+V SW M+ + + +ARRLF
Sbjct: 99 IPQPNTVSYNIMLACHWHHLGVHDARGFFDSMPLKDVASWNTMISALAQVGLMGEARRLF 158
Query: 61 DMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARK 120
MPEK+ V+ + MV GY G +D E F P ++VI+WT MI+GY+ R+++A +
Sbjct: 159 SAMPEKNCVSWSAMVSGYVACGDLDAAVECFYAAPMRSVITWTAMITGYMKFGRVELAER 218
Query: 121 LFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAM------------------------ 156
LF+ M + V+W AM+ GY + GR +D LF+ M
Sbjct: 219 LFQEMSMRTLVTWNAMIAGYVENGRAEDGLRLFRTMLETGVKPNALSLTSVLLGCSNLSA 278
Query: 157 --------------PMKS-VVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKV 201
P+ S A S++ + G+++ A +F Q+ KD W+ MI
Sbjct: 279 LQLGKQVHQLVCKCPLSSDTTAGTSLVSMYSKCGDLKDAWELFIQIPRKDVVCWNAMISG 338
Query: 202 YERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVR 255
Y + G + + LF M+KEG++ ++ + ++VL C +D G Q + R
Sbjct: 339 YAQHGAGKKALRLFDEMKKEGLKPDWITFVAVLLACNHAGLVDLGVQYFNTMRR 392
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 91/337 (27%), Positives = 162/337 (48%), Gaps = 24/337 (7%)
Query: 93 EMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYT-QCGRIQDAWE 151
E NVI+ +I+ YV ID A ++FE M K+ V+W ++L + + G + A +
Sbjct: 35 EFNNNNVIASNKLIASYVRCGDIDSAVRVFEDMKVKSTVTWNSILAAFAKKPGHFEYARQ 94
Query: 152 LFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEV 211
LF+ +P + V+ N M+ + V AR FD M KD A+W+ MI + G E
Sbjct: 95 LFEKIPQPNTVSYNIMLACHWHHLGVHDARGFFDSMPLKDVASWNTMISALAQVGLMGEA 154
Query: 212 IDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDV---DVYVASVL 268
LF+ M ++ V++ +++S C L + V C + V + +
Sbjct: 155 RRLFSAMPEKNC-VSWSAMVSGYVACGDLDA----------AVECFYAAPMRSVITWTAM 203
Query: 269 ITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDD 328
IT Y+K G + + +F + + +V WN++I+GY + G E L++F M +GV P+
Sbjct: 204 ITGYMKFGRVELAERLFQEMSMRTLVTWNAMIAGYVENGRAEDGLRLFRTMLETGVKPNA 263
Query: 329 VTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIE 388
++L VL CS ++ G+++ + + K + T +V + + G ++DA +L
Sbjct: 264 LSLTSVLLGCSNLSALQLGKQVHQ-LVCKCPLSSDTTAGTSLVSMYSKCGDLKDAWELFI 322
Query: 389 AMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQL 425
+P D + W +++ H A KK L+L
Sbjct: 323 QIP-RKDVVCWNAMISGYAQHG-------AGKKALRL 351
>gi|255542982|ref|XP_002512554.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548515|gb|EEF50006.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 544
Score = 546 bits (1408), Expect = e-153, Method: Compositional matrix adjust.
Identities = 251/343 (73%), Positives = 300/343 (87%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MPERNVVSWTAMVRGY++EGMI +A +LFW+MPEKNVVSWTVMLGG I D R+++A +L+
Sbjct: 105 MPERNVVSWTAMVRGYIQEGMIKQAESLFWEMPEKNVVSWTVMLGGLIEDGRVNEAIKLY 164
Query: 61 DMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARK 120
D+MP KDVVA+TNM+ G C +GR+ E REIFDEMPK+NV++WTTMISGY NN++DVARK
Sbjct: 165 DLMPLKDVVARTNMIGGLCMEGRLSEAREIFDEMPKRNVVAWTTMISGYAMNNKVDVARK 224
Query: 121 LFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKA 180
LFEVMP+KNEV+WTAMLMGYT+ GRI++A ELF+AMPMK V A N MI+G GQ+GEV KA
Sbjct: 225 LFEVMPDKNEVTWTAMLMGYTRSGRIKEAAELFEAMPMKPVPACNEMIIGFGQSGEVGKA 284
Query: 181 RVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASL 240
+ FDQMREKDD TWS MIKVYERKG ELE +DLF LMQ+EGVR NFPS+IS+LSVC SL
Sbjct: 285 KWTFDQMREKDDGTWSAMIKVYERKGLELEALDLFRLMQREGVRPNFPSIISILSVCGSL 344
Query: 241 ASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSII 300
ASLD+GRQVH QLVR QFD DVYV+SVLITMYIKCG+LVK K +FD F+ KD VMWNSII
Sbjct: 345 ASLDYGRQVHTQLVRSQFDFDVYVSSVLITMYIKCGDLVKAKRVFDRFSMKDTVMWNSII 404
Query: 301 SGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGK 343
+GYAQ+GLGE++L+VF EM SSG+ PD++T +GVL+ACSY+GK
Sbjct: 405 TGYAQHGLGEEALEVFFEMLSSGISPDEITFIGVLTACSYSGK 447
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 116/407 (28%), Positives = 209/407 (51%), Gaps = 14/407 (3%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMP 64
+ +S + + + G I A +F ++P K ++SW ++ G+ ++ + +A LF+ MP
Sbjct: 16 SAISSNSQISHFARIGQINRARKIFDELPYKTIISWNAIVAGYFQNKQPREAHDLFNKMP 75
Query: 65 EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEV 124
+++ V+ ++ GY ++G ++E RE+FD+MP++NV+SWT M+ GY+ I A LF
Sbjct: 76 DRNTVSWNGLISGYVKNGMINEAREVFDKMPERNVVSWTAMVRGYIQEGMIKQAESLFWE 135
Query: 125 MPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVF 184
MPEKN VSWT ML G + GR+ +A +L+ MP+K VVA +MI GL G + +AR +F
Sbjct: 136 MPEKNVVSWTVMLGGLIEDGRVNEAIKLYDLMPLKDVVARTNMIGGLCMEGRLSEAREIF 195
Query: 185 DQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLD 244
D+M +++ W+ MI Y LF +M P V +
Sbjct: 196 DEMPKRNVVAWTTMISGYAMNNKVDVARKLFEVM---------PDKNEVTWTAMLMGYTR 246
Query: 245 HGR-QVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGY 303
GR + A+L V + +I + + GE+ K K FD KD W+++I Y
Sbjct: 247 SGRIKEAAELFEAMPMKPVPACNEMIIGFGQSGEVGKAKWTFDQMREKDDGTWSAMIKVY 306
Query: 304 AQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESM-KSKYLVEP 362
+ GL ++L +F M GV P+ +++ +LS C + GR++ + +S++ +
Sbjct: 307 ERKGLELEALDLFRLMQREGVRPNFPSIISILSVCGSLASLDYGRQVHTQLVRSQFDFDV 366
Query: 363 KTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTH 409
+ ++ + + G + A ++ + + D ++W S++ H
Sbjct: 367 YVS--SVLITMYIKCGDLVKAKRVFDRFSMK-DTVMWNSIITGYAQH 410
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 120/259 (46%), Gaps = 19/259 (7%)
Query: 160 SVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQ 219
S ++SNS I + G++ +AR +FD++ K +W+ ++ Y + E DLF M
Sbjct: 16 SAISSNSQISHFARIGQINRARKIFDELPYKTIISWNAIVAGYFQNKQPREAHDLFNKMP 75
Query: 220 KEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELV 279
N S ++S ++ R+V ++ + +V + ++ YI+ G +
Sbjct: 76 DR----NTVSWNGLISGYVKNGMINEAREVFDKMP----ERNVVSWTAMVRGYIQEGMIK 127
Query: 280 KGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACS 339
+ + +F K++V W ++ G + G +++K++ M + D V ++
Sbjct: 128 QAESLFWEMPEKNVVSWTVMLGGLIEDGRVNEAIKLYDLM----PLKDVVARTNMIGGLC 183
Query: 340 YTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIW 399
G++ E REIF+ M + +V + M+ +V+ A KL E MP + + + W
Sbjct: 184 MEGRLSEAREIFDEMPKRNVVA-----WTTMISGYAMNNKVDVARKLFEVMP-DKNEVTW 237
Query: 400 GS-LLGACRTHMKLDLAEV 417
+ L+G R+ + AE+
Sbjct: 238 TAMLMGYTRSGRIKEAAEL 256
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 93/197 (47%), Gaps = 19/197 (9%)
Query: 269 ITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPD- 327
I+ + + G++ + + IFD K I+ WN+I++GY Q K + H++F+ MPD
Sbjct: 24 ISHFARIGQINRARKIFDELPYKTIISWNAIVAGYFQ----NKQPREAHDLFNK--MPDR 77
Query: 328 -DVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKL 386
V+ G++S G + E RE+F+ M + +V + MV + G ++ A L
Sbjct: 78 NTVSWNGLISGYVKNGMINEAREVFDKMPERNVVS-----WTAMVRGYIQEGMIKQAESL 132
Query: 387 IEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEP-KNAGPYILLSNIYASQGR 445
MP E + + W +LG +++ A KL L P K+ + +GR
Sbjct: 133 FWEMP-EKNVVSWTVMLGGLIEDGRVN----EAIKLYDLMPLKDVVARTNMIGGLCMEGR 187
Query: 446 FHDVAELRKNMRKRNVI 462
+ E+ M KRNV+
Sbjct: 188 LSEAREIFDEMPKRNVV 204
>gi|302791503|ref|XP_002977518.1| hypothetical protein SELMODRAFT_107192 [Selaginella moellendorffii]
gi|300154888|gb|EFJ21522.1| hypothetical protein SELMODRAFT_107192 [Selaginella moellendorffii]
Length = 652
Score = 540 bits (1391), Expect = e-151, Method: Compositional matrix adjust.
Identities = 250/605 (41%), Positives = 389/605 (64%), Gaps = 6/605 (0%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MP ++ SWTA++ + G EA TLF M E+++++WT+ML S I+DA+ F
Sbjct: 49 MPRWSLGSWTALLSAFALSGHHEEAKTLFDTMQERDLIAWTIMLTVLATFSNIEDAKYHF 108
Query: 61 DMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARK 120
D MPE+D+VA T M+ + G+++ RE FD+MP++N+ SWT+++S Y + + A +
Sbjct: 109 DQMPERDLVAWTAMLAANAERGQMENARETFDQMPERNLFSWTSLLSAYGRSGDVKAAGR 168
Query: 121 LFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKA 180
+F+ MPE N V+WTAML GY+ G + A F +MP + ++A +M+ NG ++
Sbjct: 169 VFDSMPEWNLVAWTAMLTGYSLSGDVVRAKRAFDSMPERDLIAWTAMLSAYAFNGHLRYT 228
Query: 181 RVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQK-----EGVRVNFPSLISVLS 235
R +F +M E+D +W+ M+ E +LF M + +G+ N + I++L
Sbjct: 229 REIFQRMPERDLISWATMVAALVENDLLEESKELFDRMPRHCALSKGMTPNRVTFITLLD 288
Query: 236 VCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVM 295
C+ L +L GR++HA + FD D+ V++ L+ Y +CG L K++FD +D++
Sbjct: 289 ACSFLGALAEGRKIHAAVAERGFDTDLVVSNALVNFYGRCGALGDAKIVFDGMRRRDVIS 348
Query: 296 WNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMK 355
W+S+IS +AQ G +++++++H M S G +PDD+ + VL ACS +G V+ + F S+
Sbjct: 349 WSSMISAFAQRGRVDEAMELYHRMLSEGTLPDDIIFISVLFACSNSGVVEASGDFFRSIV 408
Query: 356 SKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLA 415
VEP EHYACMVD+LGRAG++ DA L+ MPF P +++ ++L AC+ + ++
Sbjct: 409 GDTQVEPTLEHYACMVDVLGRAGKLRDAEDLLRLMPFHPGPLLYMTMLSACKLYTDVERG 468
Query: 416 EVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKK 475
E AA+ + +L+P+N+ PYI L+NIY++ R D A +RK M +R + K PGCSWIEV +
Sbjct: 469 EAAAEVVFELDPENSSPYITLANIYSAAKRPKDAARIRKLMEERGIKKKPGCSWIEVLDR 528
Query: 476 VHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEK 535
VH F D + HP+ I ++++G ++EAGY D+ VL DV+E+EK + L YHSEK
Sbjct: 529 VHEFIAGDKM-HPQRDEIYAEIQRLGRQMKEAGYFQDTKVVLQDVEEDEKENLLWYHSEK 587
Query: 536 LAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCS 595
LA+A+GL+ P G P+R++KNLRVC DCH+A K+ISKV GREI++RD NRFHHF++G+CS
Sbjct: 588 LAIAFGLISTPPGAPLRIVKNLRVCSDCHAATKVISKVTGREILVRDTNRFHHFQNGMCS 647
Query: 596 CRDYW 600
C DYW
Sbjct: 648 CNDYW 652
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/364 (21%), Positives = 156/364 (42%), Gaps = 59/364 (16%)
Query: 140 YTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMI 199
+ + G ++ A ++F A+ + + M+ ++G++ A+ VFD+M +W+ ++
Sbjct: 2 FGRLGCVERARQIFDAIADRDSFSWGIMLSIYARSGDLSNAKGVFDRMPRWSLGSWTALL 61
Query: 200 KVYERKGYELEVIDLFTLMQK-------------------EGVRVNFPSL--------IS 232
+ G+ E LF MQ+ E + +F + +
Sbjct: 62 SAFALSGHHEEAKTLFDTMQERDLIAWTIMLTVLATFSNIEDAKYHFDQMPERDLVAWTA 121
Query: 233 VLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKD 292
+L+ A +++ R+ Q+ + +++ + L++ Y + G++ +FD+ +
Sbjct: 122 MLAANAERGQMENARETFDQMP----ERNLFSWTSLLSAYGRSGDVKAAGRVFDSMPEWN 177
Query: 293 IVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFE 352
+V W ++++GY+ G ++ + F M D + +LSA ++ G ++ REIF+
Sbjct: 178 LVAWTAMLTGYSLSGDVVRAKRAFDSMPER----DLIAWTAMLSAYAFNGHLRYTREIFQ 233
Query: 353 SMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMP--------FEPDAIIWGSLLG 404
M + L+ +A MV L +E++ +L + MP P+ + + +LL
Sbjct: 234 RMPERDLIS-----WATMVAALVENDLLEESKELFDRMPRHCALSKGMTPNRVTFITLLD 288
Query: 405 ACRTHMKLD-----LAEVAAKKL-LQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRK 458
AC L A VA + L NA L N Y G D + MR+
Sbjct: 289 ACSFLGALAEGRKIHAAVAERGFDTDLVVSNA-----LVNFYGRCGALGDAKIVFDGMRR 343
Query: 459 RNVI 462
R+VI
Sbjct: 344 RDVI 347
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 89/194 (45%), Gaps = 17/194 (8%)
Query: 271 MYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEM--FSSGVMPDD 328
M+ + G + + + IFD A +D W ++S YA+ G + VF M +S G
Sbjct: 1 MFGRLGCVERARQIFDAIADRDSFSWGIMLSIYARSGDLSNAKGVFDRMPRWSLG----- 55
Query: 329 VTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIE 388
+ +LSA + +G +E + +F++M+ + L+ + M+ +L +EDA +
Sbjct: 56 -SWTALLSAFALSGHHEEAKTLFDTMQERDLIA-----WTIMLTVLATFSNIEDAKYHFD 109
Query: 389 AMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHD 448
MP E D + W ++L A ++ E A + Q+ +N + L + Y G
Sbjct: 110 QMP-ERDLVAWTAMLAANAERGQM---ENARETFDQMPERNLFSWTSLLSAYGRSGDVKA 165
Query: 449 VAELRKNMRKRNVI 462
+ +M + N++
Sbjct: 166 AGRVFDSMPEWNLV 179
>gi|359497567|ref|XP_002265980.2| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like, partial [Vitis vinifera]
Length = 599
Score = 538 bits (1385), Expect = e-150, Method: Compositional matrix adjust.
Identities = 273/597 (45%), Positives = 377/597 (63%), Gaps = 2/597 (0%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFI-RDSRIDDARRLFDMM 63
NV+S ++ ++ G + A +F M K V+W ML G+ R +I AR+LFD +
Sbjct: 4 NVISSNRVITNHIRSGDLNSALRVFESMTVKTTVTWNSMLAGYSNRRGKIKVARQLFDRI 63
Query: 64 PEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFE 123
PE D+ + M+ Y + V+ R FD+MP K+ SW TMISG+ N +D AR+LF
Sbjct: 64 PEPDIFSYNIMLACYLHNADVESARLFFDQMPVKDTASWNTMISGFSQNGMMDQARELFL 123
Query: 124 VMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVV 183
VMP +N VSW AM+ GY + G + A +LF+ P++SVVA +MI G + G+++ A
Sbjct: 124 VMPVRNSVSWNAMISGYVESGDLDLAKQLFEVAPVRSVVAWTAMITGFMKFGKIELAEKY 183
Query: 184 FDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASL 243
F++M K+ TW+ MI Y + LF M + G R N SL SVL C++L++L
Sbjct: 184 FEEMPMKNLVTWNAMIAGYIENCQAENGLKLFKRMVESGFRPNPSSLSSVLLGCSNLSAL 243
Query: 244 DHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGY 303
G+QVH + + ++ + L++MY KCG+L +F KD+V WN++ISGY
Sbjct: 244 KLGKQVHQLICKSPVSWNITAGTSLLSMYCKCGDLEDAWKLFLVMPQKDVVTWNAMISGY 303
Query: 304 AQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPK 363
AQ+G GEK+L +F +M G+ PD +T V VLSAC++ G V G E F SM Y VE K
Sbjct: 304 AQHGAGEKALYLFDKMRDEGMKPDWITFVAVLSACNHAGFVDLGIEYFNSMVRDYGVEAK 363
Query: 364 TEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLL 423
+HY C+VDLLGR G++ +A+ LI+ MPF+P + I+G+LLGACR H L+LAE AAK LL
Sbjct: 364 PDHYTCVVDLLGRGGKLVEAVDLIKKMPFKPHSAIFGTLLGACRIHKNLELAEFAAKNLL 423
Query: 424 QLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRD 483
L+P++A Y+ L+N+YA+ R+ VA +R++M+ VIK PG SWIEV+ VH F D
Sbjct: 424 NLDPESAAGYVQLANVYAAMNRWDHVAMVRRSMKDNKVIKTPGYSWIEVKSVVHEFRSGD 483
Query: 484 CVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLV 543
+ HPE I L ++ +R AGY PD + LHDV EE+K L HSEKLA+AYGL+
Sbjct: 484 RI-HPELAFIHEKLNELERKMRLAGYVPDLEYALHDVGEEQKKQILLRHSEKLAIAYGLI 542
Query: 544 KLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
++P G PIRV KNLRVCGDCHSA K IS + GR II+RD RFHHF+ G CSC DYW
Sbjct: 543 RMPLGTPIRVFKNLRVCGDCHSATKYISAIEGRVIIVRDTTRFHHFRQGECSCGDYW 599
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 88/294 (29%), Positives = 151/294 (51%), Gaps = 39/294 (13%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
+PE ++ S+ M+ Y+ + A F QMP K+ SW M+ GF ++ +D AR LF
Sbjct: 63 IPEPDIFSYNIMLACYLHNADVESARLFFDQMPVKDTASWNTMISGFSQNGMMDQARELF 122
Query: 61 DMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARK 120
+MP ++ V+ M+ GY + G +D +++F+ P ++V++WT MI+G++ +I++A K
Sbjct: 123 LVMPVRNSVSWNAMISGYVESGDLDLAKQLFEVAPVRSVVAWTAMITGFMKFGKIELAEK 182
Query: 121 LFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAM------PMKSVVA------SNSMI 168
FE MP KN V+W AM+ GY + + ++ +LFK M P S ++ SN
Sbjct: 183 YFEEMPMKNLVTWNAMIAGYIENCQAENGLKLFKRMVESGFRPNPSSLSSVLLGCSNLSA 242
Query: 169 LGLGQN---------------------------GEVQKARVVFDQMREKDDATWSGMIKV 201
L LG+ G+++ A +F M +KD TW+ MI
Sbjct: 243 LKLGKQVHQLICKSPVSWNITAGTSLLSMYCKCGDLEDAWKLFLVMPQKDVVTWNAMISG 302
Query: 202 YERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVR 255
Y + G + + LF M+ EG++ ++ + ++VLS C +D G + +VR
Sbjct: 303 YAQHGAGEKALYLFDKMRDEGMKPDWITFVAVLSACNHAGFVDLGIEYFNSMVR 356
>gi|334186622|ref|NP_680717.2| tetratricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
gi|357529479|sp|Q9M4P3.3|PP316_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g16835, mitochondrial; AltName: Full=Protein DYW10;
Flags: Precursor
gi|332658412|gb|AEE83812.1| tetratricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
Length = 656
Score = 536 bits (1382), Expect = e-150, Method: Compositional matrix adjust.
Identities = 274/586 (46%), Positives = 377/586 (64%), Gaps = 3/586 (0%)
Query: 17 VEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRD-SRIDDARRLFDMMPEKDVVAQTNMV 75
V G I A +F M KN ++W +L G +D SR+ +A +LFD +PE D + M+
Sbjct: 72 VRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMMEAHQLFDEIPEPDTFSYNIML 131
Query: 76 LGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTA 135
Y ++ ++ + FD MP K+ SW TMI+GY ++ AR+LF M EKNEVSW A
Sbjct: 132 SCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSMMEKNEVSWNA 191
Query: 136 MLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMR-EKDDAT 194
M+ GY +CG ++ A FK P++ VVA +MI G + +V+ A +F M K+ T
Sbjct: 192 MISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVT 251
Query: 195 WSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLV 254
W+ MI Y + + LF M +EG+R N L S L C+ L++L GRQ+H +
Sbjct: 252 WNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVS 311
Query: 255 RCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLK 314
+ DV + LI+MY KCGEL +F+ KD+V WN++ISGYAQ+G +K+L
Sbjct: 312 KSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALC 371
Query: 315 VFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLL 374
+F EM + + PD +T V VL AC++ G V G FESM Y VEP+ +HY CMVDLL
Sbjct: 372 LFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLL 431
Query: 375 GRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYI 434
GRAG++E+A+KLI +MPF P A ++G+LLGACR H ++LAE AA+KLLQL +NA Y+
Sbjct: 432 GRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNAAGYV 491
Query: 435 LLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIM 494
L+NIYAS+ R+ DVA +RK M++ NV+K PG SWIE+ KVH F D + HPE I
Sbjct: 492 QLANIYASKNRWEDVARVRKRMKESNVVKVPGYSWIEIRNKVHHFRSSDRI-HPELDSIH 550
Query: 495 RMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVM 554
+ L+++ ++ AGY P+ F LH+V+EE+K L +HSEKLAVA+G +KLP+G I+V
Sbjct: 551 KKLKELEKKMKLAGYKPELEFALHNVEEEQKEKLLLWHSEKLAVAFGCIKLPQGSQIQVF 610
Query: 555 KNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
KNLR+CGDCH AIK IS++ REII+RD RFHHFKDG CSC DYW
Sbjct: 611 KNLRICGDCHKAIKFISEIEKREIIVRDTTRFHHFKDGSCSCGDYW 656
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 138/295 (46%), Gaps = 40/295 (13%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
+PE + S+ M+ YV +A + F +MP K+ SW M+ G+ R ++ AR LF
Sbjct: 119 IPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELF 178
Query: 61 DMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARK 120
M EK+ V+ M+ GY + G +++ F P + V++WT MI+GY+ ++++A
Sbjct: 179 YSMMEKNEVSWNAMISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEA 238
Query: 121 LFEVMP-EKNEVSWTAMLMGYTQCGRIQDAWELFKAM------PMKS------------- 160
+F+ M KN V+W AM+ GY + R +D +LF+AM P S
Sbjct: 239 MFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELS 298
Query: 161 --------------------VVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIK 200
V A S+I + GE+ A +F+ M++KD W+ MI
Sbjct: 299 ALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMIS 358
Query: 201 VYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVR 255
Y + G + + LF M +R ++ + ++VL C ++ G +VR
Sbjct: 359 GYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVR 413
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 91/323 (28%), Positives = 158/323 (48%), Gaps = 14/323 (4%)
Query: 96 KKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQ-CGRIQDAWELFK 154
+ + +I+ V + ID A ++F M KN ++W ++L+G ++ R+ +A +LF
Sbjct: 58 QDQIFPLNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMMEAHQLFD 117
Query: 155 AMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDL 214
+P + N M+ +N +KA+ FD+M KD A+W+ MI Y R+G + +L
Sbjct: 118 EIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKAREL 177
Query: 215 F-TLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYI 273
F ++M+K V N ++IS C L H +V VR V + +IT Y+
Sbjct: 178 FYSMMEKNEVSWN--AMISGYIECGDLEKASHFFKVAP--VR-----GVVAWTAMITGYM 228
Query: 274 KCGELVKGKLIF-DNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLV 332
K ++ + +F D +K++V WN++ISGY + E LK+F M G+ P+ L
Sbjct: 229 KAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLS 288
Query: 333 GVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPF 392
L CS ++ GR+I + + L T ++ + + G++ DA KL E M
Sbjct: 289 SALLGCSELSALQLGRQIHQIVSKSTLCNDVTA-LTSLISMYCKCGELGDAWKLFEVMK- 346
Query: 393 EPDAIIWGSLLGACRTHMKLDLA 415
+ D + W +++ H D A
Sbjct: 347 KKDVVAWNAMISGYAQHGNADKA 369
>gi|297720883|ref|NP_001172804.1| Os02g0151000 [Oryza sativa Japonica Group]
gi|51535971|dbj|BAD38052.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|218190072|gb|EEC72499.1| hypothetical protein OsI_05871 [Oryza sativa Indica Group]
gi|255670608|dbj|BAH91533.1| Os02g0151000 [Oryza sativa Japonica Group]
Length = 922
Score = 533 bits (1373), Expect = e-148, Method: Compositional matrix adjust.
Identities = 266/639 (41%), Positives = 388/639 (60%), Gaps = 41/639 (6%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
M ERN +W+ M+ G I A ++ + P K++ T ++ G + RIDDAR LF
Sbjct: 286 MIERNEYTWSTMIAALSHGGRIDAAIAVYERDPVKSIACRTALITGLAQCGRIDDARILF 345
Query: 61 DMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARK 120
+ +PE VV+ ++ GY Q+G V+E +E+FD+MP +N ISW MI+GY N R + A
Sbjct: 346 EQIPEPIVVSWNALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALG 405
Query: 121 LFE------VMP---------------------------------EKNEVSWTAMLMGYT 141
L + ++P + N + A++ Y
Sbjct: 406 LLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSLAVKVGCQFNSFACNALITMYG 465
Query: 142 QCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKV 201
+C ++ A ++F M K +V+ NS + L QN + +AR FD M +DD +W+ +I
Sbjct: 466 KCRNMEYARQVFSRMVTKDIVSWNSFLAALVQNDLLDEARNTFDNMLSRDDVSWTTIISA 525
Query: 202 YERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVD 261
Y E + F M E N P L +L VC SL + G+Q+H ++ D +
Sbjct: 526 YAHAEQSNEAMGAFKTMFCEHELPNSPILTILLGVCGSLGASKIGQQIHTVAIKLGMDSE 585
Query: 262 VYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFS 321
+ VA+ LI+MY KCG + IFD +DI WN+II+GYAQ+GLG +++K++ M S
Sbjct: 586 LIVANALISMYFKCG-CADSRRIFDLMEERDIFTWNTIITGYAQHGLGREAIKMYQHMES 644
Query: 322 SGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVE 381
+GV+P++VT VG+L+ACS+ G V EG + F+SM Y + P EHYACMVDLLGR G V+
Sbjct: 645 AGVLPNEVTFVGLLNACSHAGLVDEGWKFFKSMSQDYGLTPLPEHYACMVDLLGRTGDVQ 704
Query: 382 DAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYA 441
A + I MP EPD +IW +LLGAC+ H ++ + AA+KL ++EP NAG Y++LSNIY+
Sbjct: 705 GAEQFIYDMPIEPDTVIWSALLGACKIHKNAEIGKRAAEKLFRIEPSNAGNYVMLSNIYS 764
Query: 442 SQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIG 501
S G + +VAE+RK M+++ VIK PGCSW +++ K+H F D H + I+ LE++
Sbjct: 765 SLGMWGEVAEVRKIMKQQGVIKEPGCSWTQIKDKMHSFVTGD-KQHEQIEEIVATLEELY 823
Query: 502 GLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCG 561
LL+ GY PD+ FVLHD+DEE+K SL YHSEKLAVAY L+ P+G+PI+++KNLR+CG
Sbjct: 824 TLLKATGYVPDTEFVLHDIDEEQKESSLLYHSEKLAVAYCLLATPKGMPIQILKNLRICG 883
Query: 562 DCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
DCH+ IK +S V R+I +RD NRFHHF++G CSC D+W
Sbjct: 884 DCHTFIKFVSHVTKRQIDIRDGNRFHHFRNGSCSCEDFW 922
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 131/425 (30%), Positives = 215/425 (50%), Gaps = 58/425 (13%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MP R+V SW +M+ GY + +A LF +MPE+N+VSWTVM+ G+ RI++ + +
Sbjct: 153 MPSRDVSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGY---GRIENHGKAW 209
Query: 61 D---------MMP---------------------------------EKDVVAQTNMVLGY 78
D ++P E+DVV T ++ Y
Sbjct: 210 DIFCKMHREGLLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVY 269
Query: 79 CQDGRV-DEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAML 137
+D V D + F+ M ++N +W+TMI+ + RID A ++E P K+ TA++
Sbjct: 270 SRDTSVLDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVYERDPVKSIACRTALI 329
Query: 138 MGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSG 197
G QCGRI DA LF+ +P VV+ N++I G QNG V +A+ +FD+M ++ +W+G
Sbjct: 330 TGLAQCGRIDDARILFEQIPEPIVVSWNALITGYMQNGMVNEAKELFDKMPFRNTISWAG 389
Query: 198 MIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVR-- 255
MI Y + G E + L + + G+ + SL S+ C+++ +L+ G QVH+ V+
Sbjct: 390 MIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSLAVKVG 449
Query: 256 CQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKV 315
CQF + + + LITMY KC + + +F +KDIV WNS ++ Q L +++
Sbjct: 450 CQF--NSFACNALITMYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALVQNDLLDEARNT 507
Query: 316 FHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLG 375
F M S DDV+ ++SA ++ + E F++M E + + + LLG
Sbjct: 508 FDNMLSR----DDVSWTTIISAYAHAEQSNEAMGAFKTM----FCEHELPNSPILTILLG 559
Query: 376 RAGQV 380
G +
Sbjct: 560 VCGSL 564
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 135/470 (28%), Positives = 229/470 (48%), Gaps = 62/470 (13%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MP R++++W +M+ Y GM A L+ + N+ + ++L G+ R R+ +ARR+F
Sbjct: 60 MPRRDIIAWNSMISAYCHNGMPDAARDLYDAISGGNMRTGAILLSGYGRLGRVLEARRVF 119
Query: 61 DMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARK 120
D M E++ VA M+ Y Q+G + R +FD MP ++V SW +M++GY ++ ++ AR
Sbjct: 120 DGMLERNTVAWNAMISCYVQNGDITMARRLFDAMPSRDVSSWNSMLTGYCHSLQMVDARN 179
Query: 121 LFEVMPEKNEVSWTAMLMGYTQCGRIQD---AWELFKAM------PMKSVVASN-SMILG 170
LFE MPE+N VSWT M+ GY GRI++ AW++F M P +S AS S + G
Sbjct: 180 LFEKMPERNLVSWTVMISGY---GRIENHGKAWDIFCKMHREGLLPDQSNFASALSAVKG 236
Query: 171 LGQNGEVQKARVV---------------------------------FDQMREKDDATWSG 197
LG ++ RV+ F+ M E+++ TWS
Sbjct: 237 LGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFFESMIERNEYTWST 296
Query: 198 MIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQ 257
MI G I ++ + + +LI+ L+ C GR A+++ Q
Sbjct: 297 MIAALSHGGRIDAAIAVYERDPVKSIACR-TALITGLAQC--------GRIDDARILFEQ 347
Query: 258 FDVDVYVA-SVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVF 316
+ V+ + LIT Y++ G + + K +FD ++ + W +I+GYAQ G E++L +
Sbjct: 348 IPEPIVVSWNALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLL 407
Query: 317 HEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYAC--MVDLL 374
E+ SG++P +L + ACS ++ G ++ S+ K V + +AC ++ +
Sbjct: 408 QELHRSGMLPSLSSLTSIFFACSNIVALETGTQV-HSLAVK--VGCQFNSFACNALITMY 464
Query: 375 GRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQ 424
G+ +E A ++ M D + W S L A + LD A +L
Sbjct: 465 GKCRNMEYARQVFSRM-VTKDIVSWNSFLAALVQNDLLDEARNTFDNMLS 513
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 95/358 (26%), Positives = 183/358 (51%), Gaps = 11/358 (3%)
Query: 49 RDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISG 108
R R+ +AR +FD MP +D++A +M+ YC +G D R+++D + N+ + ++SG
Sbjct: 46 RLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDAISGGNMRTGAILLSG 105
Query: 109 YVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMI 168
Y R+ AR++F+ M E+N V+W AM+ Y Q G I A LF AMP + V + NSM+
Sbjct: 106 YGRLGRVLEARRVFDGMLERNTVAWNAMISCYVQNGDITMARRLFDAMPSRDVSSWNSML 165
Query: 169 LGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFP 228
G + ++ AR +F++M E++ +W+ MI Y R + D+F M +EG+ +
Sbjct: 166 TGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKMHREGLLPDQS 225
Query: 229 SLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKL-IFDN 287
+ S LS L +LD + ++ F+ DV + + ++ +Y + ++ + F++
Sbjct: 226 NFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFFES 285
Query: 288 FASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEG 347
++ W+++I+ + G + ++ V+ + + G L+ C G++ +
Sbjct: 286 MIERNEYTWSTMIAALSHGGRIDAAIAVYERDPVKSIACRTALITG-LAQC---GRIDDA 341
Query: 348 REIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
R +FE + EP + ++ + G V +A +L + MPF + I W ++
Sbjct: 342 RILFEQIP-----EPIVVSWNALITGYMQNGMVNEAKELFDKMPFR-NTISWAGMIAG 393
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 73/156 (46%), Gaps = 16/156 (10%)
Query: 274 KCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVG 333
+ G + + + +FD +DI+ WNS+IS Y G+ + + + ++ S G M L
Sbjct: 46 RLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAA-RDLYDAISGGNMRTGAIL-- 102
Query: 334 VLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFE 393
LS G+V E R +F+ M +E T + M+ + G + A +L +AMP
Sbjct: 103 -LSGYGRLGRVLEARRVFDGM-----LERNTVAWNAMISCYVQNGDITMARRLFDAMP-S 155
Query: 394 PDAIIWGSLL-GACRTHMKLDLAEVAAKKLLQLEPK 428
D W S+L G C + L V A+ L + P+
Sbjct: 156 RDVSSWNSMLTGYCHS-----LQMVDARNLFEKMPE 186
>gi|222622177|gb|EEE56309.1| hypothetical protein OsJ_05395 [Oryza sativa Japonica Group]
Length = 922
Score = 533 bits (1373), Expect = e-148, Method: Compositional matrix adjust.
Identities = 266/639 (41%), Positives = 388/639 (60%), Gaps = 41/639 (6%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
M ERN +W+ M+ G I A ++ + P K++ T ++ G + RIDDAR LF
Sbjct: 286 MIERNEYTWSTMIAALSHGGRIDAAIAVYERDPVKSIACRTALITGLAQCGRIDDARILF 345
Query: 61 DMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARK 120
+ +PE VV+ ++ GY Q+G V+E +E+FD+MP +N ISW MI+GY N R + A
Sbjct: 346 EQIPEPIVVSWNALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALG 405
Query: 121 LFE------VMP---------------------------------EKNEVSWTAMLMGYT 141
L + ++P + N + A++ Y
Sbjct: 406 LLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSLAVKVGCQFNSFACNALITMYG 465
Query: 142 QCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKV 201
+C ++ A ++F M K +V+ NS + L QN + +AR FD M +DD +W+ +I
Sbjct: 466 KCRNMEYARQVFSRMVTKDIVSWNSFLAALVQNDLLDEARNTFDNMLSRDDVSWTTIISA 525
Query: 202 YERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVD 261
Y E + F M E N P L +L VC SL + G+Q+H ++ D +
Sbjct: 526 YAHAEQSNEAMGAFKTMFCEHELPNSPILTILLGVCGSLGASKIGQQIHTVAIKLGMDSE 585
Query: 262 VYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFS 321
+ VA+ LI+MY KCG + IFD +DI WN+II+GYAQ+GLG +++K++ M S
Sbjct: 586 LIVANALISMYFKCG-CADSRRIFDLMEERDIFTWNTIITGYAQHGLGREAIKMYQHMES 644
Query: 322 SGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVE 381
+GV+P++VT VG+L+ACS+ G V EG + F+SM Y + P EHYACMVDLLGR G V+
Sbjct: 645 AGVLPNEVTFVGLLNACSHAGLVDEGWKFFKSMSQDYGLTPLPEHYACMVDLLGRTGDVQ 704
Query: 382 DAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYA 441
A + I MP EPD +IW +LLGAC+ H ++ + AA+KL ++EP NAG Y++LSNIY+
Sbjct: 705 GAEQFIYDMPIEPDTVIWSALLGACKIHKNAEIGKRAAEKLFRIEPSNAGNYVMLSNIYS 764
Query: 442 SQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIG 501
S G + +VAE+RK M+++ VIK PGCSW +++ K+H F D H + I+ LE++
Sbjct: 765 SLGMWGEVAEVRKIMKQQGVIKEPGCSWTQIKDKMHSFVTGD-KQHEQIEEIVATLEELY 823
Query: 502 GLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCG 561
LL+ GY PD+ FVLHD+DEE+K SL YHSEKLAVAY L+ P+G+PI+++KNLR+CG
Sbjct: 824 TLLKATGYVPDTEFVLHDIDEEQKESSLLYHSEKLAVAYCLLATPKGMPIQILKNLRICG 883
Query: 562 DCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
DCH+ IK +S V R+I +RD NRFHHF++G CSC D+W
Sbjct: 884 DCHTFIKFVSHVTKRQIDIRDGNRFHHFRNGSCSCEDFW 922
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 131/422 (31%), Positives = 212/422 (50%), Gaps = 52/422 (12%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MP R+V SW +M+ GY + +A LF +MPE+N+VSWTVM+ G+ R A +F
Sbjct: 153 MPSRDVSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIF 212
Query: 61 ------DMMP---------------------------------EKDVVAQTNMVLGYCQD 81
++P E+DVV T ++ Y +D
Sbjct: 213 CKMHREGLLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRD 272
Query: 82 GRV-DEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGY 140
V D + F+ M ++N +W+TMI+ + RID A ++E P K+ TA++ G
Sbjct: 273 TSVLDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVYERDPVKSIACRTALITGL 332
Query: 141 TQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIK 200
QCGRI DA LF+ +P VV+ N++I G QNG V +A+ +FD+M ++ +W+GMI
Sbjct: 333 AQCGRIDDARILFEQIPEPIVVSWNALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIA 392
Query: 201 VYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVR--CQF 258
Y + G E + L + + G+ + SL S+ C+++ +L+ G QVH+ V+ CQF
Sbjct: 393 GYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSLAVKVGCQF 452
Query: 259 DVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHE 318
+ + + LITMY KC + + +F +KDIV WNS ++ Q L +++ F
Sbjct: 453 --NSFACNALITMYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALVQNDLLDEARNTFDN 510
Query: 319 MFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAG 378
M S DDV+ ++SA ++ + E F++M E + + + LLG G
Sbjct: 511 MLSR----DDVSWTTIISAYAHAEQSNEAMGAFKTM----FCEHELPNSPILTILLGVCG 562
Query: 379 QV 380
+
Sbjct: 563 SL 564
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 135/470 (28%), Positives = 229/470 (48%), Gaps = 62/470 (13%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MP R++++W +M+ Y GM A L+ + N+ + ++L G+ R R+ +ARR+F
Sbjct: 60 MPRRDIIAWNSMISAYCHNGMPDAARDLYDAISGGNMRTGAILLSGYGRLGRVLEARRVF 119
Query: 61 DMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARK 120
D M E++ VA M+ Y Q+G + R +FD MP ++V SW +M++GY ++ ++ AR
Sbjct: 120 DGMLERNTVAWNAMISCYVQNGDITMARRLFDAMPSRDVSSWNSMLTGYCHSLQMVDARN 179
Query: 121 LFEVMPEKNEVSWTAMLMGYTQCGRIQD---AWELFKAM------PMKSVVASN-SMILG 170
LFE MPE+N VSWT M+ GY GRI++ AW++F M P +S AS S + G
Sbjct: 180 LFEKMPERNLVSWTVMISGY---GRIENHGKAWDIFCKMHREGLLPDQSNFASALSAVKG 236
Query: 171 LGQNGEVQKARVV---------------------------------FDQMREKDDATWSG 197
LG ++ RV+ F+ M E+++ TWS
Sbjct: 237 LGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFFESMIERNEYTWST 296
Query: 198 MIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQ 257
MI G I ++ + + +LI+ L+ C GR A+++ Q
Sbjct: 297 MIAALSHGGRIDAAIAVYERDPVKSIACR-TALITGLAQC--------GRIDDARILFEQ 347
Query: 258 FDVDVYVA-SVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVF 316
+ V+ + LIT Y++ G + + K +FD ++ + W +I+GYAQ G E++L +
Sbjct: 348 IPEPIVVSWNALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLL 407
Query: 317 HEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYAC--MVDLL 374
E+ SG++P +L + ACS ++ G ++ S+ K V + +AC ++ +
Sbjct: 408 QELHRSGMLPSLSSLTSIFFACSNIVALETGTQV-HSLAVK--VGCQFNSFACNALITMY 464
Query: 375 GRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQ 424
G+ +E A ++ M D + W S L A + LD A +L
Sbjct: 465 GKCRNMEYARQVFSRM-VTKDIVSWNSFLAALVQNDLLDEARNTFDNMLS 513
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 95/358 (26%), Positives = 183/358 (51%), Gaps = 11/358 (3%)
Query: 49 RDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISG 108
R R+ +AR +FD MP +D++A +M+ YC +G D R+++D + N+ + ++SG
Sbjct: 46 RLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDAISGGNMRTGAILLSG 105
Query: 109 YVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMI 168
Y R+ AR++F+ M E+N V+W AM+ Y Q G I A LF AMP + V + NSM+
Sbjct: 106 YGRLGRVLEARRVFDGMLERNTVAWNAMISCYVQNGDITMARRLFDAMPSRDVSSWNSML 165
Query: 169 LGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFP 228
G + ++ AR +F++M E++ +W+ MI Y R + D+F M +EG+ +
Sbjct: 166 TGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKMHREGLLPDQS 225
Query: 229 SLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKL-IFDN 287
+ S LS L +LD + ++ F+ DV + + ++ +Y + ++ + F++
Sbjct: 226 NFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFFES 285
Query: 288 FASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEG 347
++ W+++I+ + G + ++ V+ + + G L+ C G++ +
Sbjct: 286 MIERNEYTWSTMIAALSHGGRIDAAIAVYERDPVKSIACRTALITG-LAQC---GRIDDA 341
Query: 348 REIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
R +FE + EP + ++ + G V +A +L + MPF + I W ++
Sbjct: 342 RILFEQIP-----EPIVVSWNALITGYMQNGMVNEAKELFDKMPFR-NTISWAGMIAG 393
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 73/156 (46%), Gaps = 16/156 (10%)
Query: 274 KCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVG 333
+ G + + + +FD +DI+ WNS+IS Y G+ + + + ++ S G M L
Sbjct: 46 RLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAA-RDLYDAISGGNMRTGAIL-- 102
Query: 334 VLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFE 393
LS G+V E R +F+ M +E T + M+ + G + A +L +AMP
Sbjct: 103 -LSGYGRLGRVLEARRVFDGM-----LERNTVAWNAMISCYVQNGDITMARRLFDAMP-S 155
Query: 394 PDAIIWGSLL-GACRTHMKLDLAEVAAKKLLQLEPK 428
D W S+L G C + L V A+ L + P+
Sbjct: 156 RDVSSWNSMLTGYCHS-----LQMVDARNLFEKMPE 186
>gi|357167109|ref|XP_003581008.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Brachypodium distachyon]
Length = 921
Score = 528 bits (1361), Expect = e-147, Method: Compositional matrix adjust.
Identities = 268/639 (41%), Positives = 377/639 (58%), Gaps = 41/639 (6%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
M ERN +W+ M+ G I A ++ + P K++ S T +L G R RI +AR LF
Sbjct: 285 MVERNEYTWSTMIAALSHGGRIDAAIAVYGRDPVKSIPSQTALLTGLARCGRITEARILF 344
Query: 61 DMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARK 120
+ +P+ VV+ M+ GY Q+G VDE +E+FD MP +N ISW MI+GY N R + A
Sbjct: 345 EQIPDPIVVSWNAMITGYMQNGMVDEAKELFDRMPFRNTISWAGMIAGYAQNGRSEEALD 404
Query: 121 LFEVMPEK---------------------------------------NEVSWTAMLMGYT 141
L + + N A++ Y
Sbjct: 405 LLQALHRNGMLPSLSSLTSSFLACSHIGALETGRQVHSLAVKAGCQFNSYVCNALISMYG 464
Query: 142 QCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKV 201
+C ++ ++F M +K V+ NS I L QN ++ AR +FD M +D +W+ +I
Sbjct: 465 KCRNMEYVRQVFNRMRVKDTVSWNSFIAALVQNNMLEDARHIFDNMLSRDVVSWTTIISA 524
Query: 202 YERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVD 261
Y + E ++ F M E + N P L +LSVC L S G+Q+H ++ D +
Sbjct: 525 YAQAERGDEAVEFFKTMLHEHEKPNSPILTILLSVCGGLGSAKLGQQIHTVAIKHGMDSE 584
Query: 262 VYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFS 321
+ VA+ L++MY KCG +FD+ +DI WN+ I+G AQ+GLG +++K++ M S
Sbjct: 585 LIVANALMSMYFKCG-CADSHKVFDSMEERDIFTWNTFITGCAQHGLGREAIKMYEHMES 643
Query: 322 SGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVE 381
GV+P++VT VG+L+ACS+ G V EG + F+SM Y + P EHYACMVDLLGR G V+
Sbjct: 644 VGVLPNEVTFVGLLNACSHAGLVDEGWQFFKSMSRDYGLTPLLEHYACMVDLLGRTGDVQ 703
Query: 382 DAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYA 441
A K I MP EPD +IW +LLGAC+ H ++ AA+KL EP NAG Y++LSNIY+
Sbjct: 704 GAEKFIYDMPIEPDTVIWSALLGACKIHKNAEIGRRAAEKLFTTEPSNAGNYVMLSNIYS 763
Query: 442 SQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIG 501
S G + +VAELRK M++R V K PGCSW+++ KVH F D H + I L+ +
Sbjct: 764 SLGMWVEVAELRKIMKQRGVSKEPGCSWMQIRNKVHSFVTGD-KQHEKIEEIDYTLQDLY 822
Query: 502 GLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCG 561
LLR GY PD+ FVLHD+DEE+K SL YHSEKLAVAYGL+ P+G+PI++MKNLR+CG
Sbjct: 823 TLLRGTGYVPDTEFVLHDIDEEQKESSLLYHSEKLAVAYGLLVTPKGMPIQIMKNLRICG 882
Query: 562 DCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
DCH+ IK +S V R+I +RD NRFHHF++G CSC D+W
Sbjct: 883 DCHTFIKFVSHVTKRDIDIRDGNRFHHFRNGSCSCGDFW 921
Score = 209 bits (531), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 143/482 (29%), Positives = 230/482 (47%), Gaps = 78/482 (16%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MP R+V SW +MV GY + +A LF QMP++N+V+WTVM+ G++R + +F
Sbjct: 152 MPSRDVTSWNSMVTGYCHSRQMVDAWNLFKQMPQRNLVTWTVMISGYVRIEQHGKGWDIF 211
Query: 61 DMMP---------------------------------------EKDVVAQTNMVLGYCQD 81
MM E DVV T+++ Y +D
Sbjct: 212 RMMHHEGASPDQSNFASVLSAVTGLQDLGVLEVLRPLVLKTGFESDVVIGTSILNVYTRD 271
Query: 82 GR-VDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGY 140
+D + FD M ++N +W+TMI+ + RID A ++ P K+ S TA+L G
Sbjct: 272 ASALDIAIKFFDGMVERNEYTWSTMIAALSHGGRIDAAIAVYGRDPVKSIPSQTALLTGL 331
Query: 141 TQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIK 200
+CGRI +A LF+ +P VV+ N+MI G QNG V +A+ +FD+M ++ +W+GMI
Sbjct: 332 ARCGRITEARILFEQIPDPIVVSWNAMITGYMQNGMVDEAKELFDRMPFRNTISWAGMIA 391
Query: 201 VYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVR--CQF 258
Y + G E +DL + + G+ + SL S C+ + +L+ GRQVH+ V+ CQF
Sbjct: 392 GYAQNGRSEEALDLLQALHRNGMLPSLSSLTSSFLACSHIGALETGRQVHSLAVKAGCQF 451
Query: 259 DVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNS-------------------- 298
+ YV + LI+MY KC + + +F+ KD V WNS
Sbjct: 452 NS--YVCNALISMYGKCRNMEYVRQVFNRMRVKDTVSWNSFIAALVQNNMLEDARHIFDN 509
Query: 299 -----------IISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEG 347
IIS YAQ G+++++ F M P+ L +LS C G K G
Sbjct: 510 MLSRDVVSWTTIISAYAQAERGDEAVEFFKTMLHEHEKPNSPILTILLSVCGGLGSAKLG 569
Query: 348 REIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACR 407
++I ++ K+ ++ + ++ + + G D+ K+ ++M E D W + + C
Sbjct: 570 QQI-HTVAIKHGMDSELIVANALMSMYFKCG-CADSHKVFDSME-ERDIFTWNTFITGCA 626
Query: 408 TH 409
H
Sbjct: 627 QH 628
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 132/496 (26%), Positives = 238/496 (47%), Gaps = 53/496 (10%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MP R++++W +M+ Y GM+ +A LF + NV + T++L G+ R R+ DARR+F
Sbjct: 59 MPHRDIIAWNSMISAYCNSGMLEDARILFDAISGGNVRTATILLSGYARLGRVLDARRVF 118
Query: 61 DMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARK 120
D MPE++ VA MV Y Q+G + R +FD MP ++V SW +M++GY ++ ++ A
Sbjct: 119 DGMPERNTVAWNAMVSCYVQNGDITMARRLFDAMPSRDVTSWNSMVTGYCHSRQMVDAWN 178
Query: 121 LFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAM------PMKSVVASN-SMILGLGQ 173
LF+ MP++N V+WT M+ GY + + W++F+ M P +S AS S + GL
Sbjct: 179 LFKQMPQRNLVTWTVMISGYVRIEQHGKGWDIFRMMHHEGASPDQSNFASVLSAVTGLQD 238
Query: 174 NGEVQKARVV---------------------------------FDQMREKDDATWSGMIK 200
G ++ R + FD M E+++ TWS MI
Sbjct: 239 LGVLEVLRPLVLKTGFESDVVIGTSILNVYTRDASALDIAIKFFDGMVERNEYTWSTMIA 298
Query: 201 VYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDV 260
G I ++ ++ V+ + PS ++L+ A + R + Q+ D
Sbjct: 299 ALSHGGRIDAAIAVYG---RDPVK-SIPSQTALLTGLARCGRITEARILFEQIP----DP 350
Query: 261 DVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMF 320
V + +IT Y++ G + + K +FD ++ + W +I+GYAQ G E++L + +
Sbjct: 351 IVVSWNAMITGYMQNGMVDEAKELFDRMPFRNTISWAGMIAGYAQNGRSEEALDLLQALH 410
Query: 321 SSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQV 380
+G++P +L ACS+ G ++ GR++ S+ K + + ++ + G+ +
Sbjct: 411 RNGMLPSLSSLTSSFLACSHIGALETGRQV-HSLAVKAGCQFNSYVCNALISMYGKCRNM 469
Query: 381 EDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIY 440
E ++ M + D + W S + A + L+ A +L ++ + + + Y
Sbjct: 470 EYVRQVFNRMRVK-DTVSWNSFIAALVQNNMLEDARHIFDNMLS---RDVVSWTTIISAY 525
Query: 441 ASQGRFHDVAELRKNM 456
A R + E K M
Sbjct: 526 AQAERGDEAVEFFKTM 541
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 107/413 (25%), Positives = 194/413 (46%), Gaps = 46/413 (11%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVV 69
+A +R G + EA +F MP +++++W M+ + ++DAR LFD + +V
Sbjct: 37 SARIRELARLGRLREAREVFDAMPHRDIIAWNSMISAYCNSGMLEDARILFDAISGGNVR 96
Query: 70 AQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKN 129
T ++ GY + GRV + R +FD MP++N ++W M+S YV N I +AR+LF+ MP ++
Sbjct: 97 TATILLSGYARLGRVLDARRVFDGMPERNTVAWNAMVSCYVQNGDITMARRLFDAMPSRD 156
Query: 130 EVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMRE 189
SW +M+ GY ++ DAW LFK MP +++V
Sbjct: 157 VTSWNSMVTGYCHSRQMVDAWNLFKQMPQRNLV--------------------------- 189
Query: 190 KDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQV 249
TW+ MI Y R + D+F +M EG + + SVLS L L +
Sbjct: 190 ----TWTVMISGYVRIEQHGKGWDIFRMMHHEGASPDQSNFASVLSAVTGLQDLGVLEVL 245
Query: 250 HAQLVRCQFDVDVYVASVLITMYIKCGELVKGKL-IFDNFASKDIVMWNSIISGYAQYGL 308
+++ F+ DV + + ++ +Y + + + FD ++ W+++I+ + G
Sbjct: 246 RPLVLKTGFESDVVIGTSILNVYTRDASALDIAIKFFDGMVERNEYTWSTMIAALSHGGR 305
Query: 309 GEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYA 368
+ ++ V+ + P L+ L+ C G++ E R +FE + +P +
Sbjct: 306 IDAAIAVYGRDPVKSI-PSQTALLTGLARC---GRITEARILFEQIP-----DPIVVSWN 356
Query: 369 CMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGAC----RTHMKLDLAEV 417
M+ + G V++A +L + MPF + I W ++ R+ LDL +
Sbjct: 357 AMITGYMQNGMVDEAKELFDRMPFR-NTISWAGMIAGYAQNGRSEEALDLLQA 408
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 119/270 (44%), Gaps = 23/270 (8%)
Query: 156 MPMKSV------VASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYEL 209
+P++SV A ++ I L + G +++AR VFD M +D W+ MI Y G
Sbjct: 22 LPVRSVHRALDKSAHSARIRELARLGRLREAREVFDAMPHRDIIAWNSMISAYCNSGMLE 81
Query: 210 EVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLI 269
+ LF + VR + +LS A L + R+V + + + + ++
Sbjct: 82 DARILFDAISGGNVR----TATILLSGYARLGRVLDARRVFDGMP----ERNTVAWNAMV 133
Query: 270 TMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDV 329
+ Y++ G++ + +FD S+D+ WNS+++GY + +F +M + V
Sbjct: 134 SCYVQNGDITMARRLFDAMPSRDVTSWNSMVTGYCHSRQMVDAWNLFKQMPQRNL----V 189
Query: 330 TLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACM---VDLLGRAGQVEDAMKL 386
T ++S + +G +IF M + P ++A + V L G +E L
Sbjct: 190 TWTVMISGYVRIEQHGKGWDIFRMMHHEG-ASPDQSNFASVLSAVTGLQDLGVLEVLRPL 248
Query: 387 IEAMPFEPDAIIWGSLLGA-CRTHMKLDLA 415
+ FE D +I S+L R LD+A
Sbjct: 249 VLKTGFESDVVIGTSILNVYTRDASALDIA 278
>gi|449517557|ref|XP_004165812.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Cucumis sativus]
Length = 667
Score = 525 bits (1352), Expect = e-146, Method: Compositional matrix adjust.
Identities = 262/597 (43%), Positives = 380/597 (63%), Gaps = 2/597 (0%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIR-DSRIDDARRLFDMM 63
+VVS + +V + A +F +M + V+W ML G+ + ++ +A LFD +
Sbjct: 72 DVVSLNKTIASFVRACDLESARNVFEKMSVRTTVTWNTMLSGYTKVAGKVKEAHELFDKI 131
Query: 64 PEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFE 123
PE D V+ M++ Y + V+ F++MP K++ SW T+ISG+ N ++ A LF
Sbjct: 132 PEPDSVSYNIMLVCYLRSYGVEAALAFFNKMPVKDIASWNTLISGFAQNGQMQKAFDLFS 191
Query: 124 VMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVV 183
VMPEKN VSW+AM+ GY + G ++ A EL+K + MKSVV +M+ G + G+V+ A +
Sbjct: 192 VMPEKNGVSWSAMISGYVEHGDLEAAEELYKNVGMKSVVVETAMLTGYMKFGKVELAERI 251
Query: 184 FDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASL 243
F +M K+ TW+ MI Y + + +F M + VR N SL SVL C++L++L
Sbjct: 252 FQRMAVKNLVTWNSMIAGYVENCRAEDGLKVFKTMIESRVRPNPLSLSSVLLGCSNLSAL 311
Query: 244 DHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGY 303
GRQ+H + + D + LI+MY KCG+L +F KD++ WN++ISGY
Sbjct: 312 PLGRQMHQLVSKSPLSKDTTACTSLISMYCKCGDLDSAWKLFLEMPRKDVISWNAMISGY 371
Query: 304 AQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPK 363
AQ+G G K+L +F +M + + PD +T V V+ AC++ G V G + F+SMK ++ +E K
Sbjct: 372 AQHGAGRKALHLFDKMRNGTMKPDWITFVAVILACNHAGFVDLGVQYFKSMKKEFGIEAK 431
Query: 364 TEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLL 423
HY C++DLLGRAG++++A+ LI+ MPF+P A I+G+LLGACR H LDLAE AA+ LL
Sbjct: 432 PVHYTCVIDLLGRAGRLDEAVSLIKEMPFKPHAAIYGTLLGACRIHKNLDLAEFAARNLL 491
Query: 424 QLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRD 483
L+P +A Y+ L+NIYA+ ++ VA++RK M++ NV+K PG SWIE++ H F D
Sbjct: 492 NLDPTSATGYVQLANIYAATNKWDQVAKVRKMMKEHNVVKIPGYSWIEIKSVTHEFRSSD 551
Query: 484 CVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLV 543
+ HPE I + L ++ G ++ AGY PD F LHDV+EE K L +HSEKLA+A+GL+
Sbjct: 552 RL-HPELTSIHKKLNELDGKMKLAGYVPDLEFALHDVEEEHKEKLLLWHSEKLAIAFGLM 610
Query: 544 KLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
K G PIRV KNLRVCGDCH AIK IS + REII+RD RFHHF++G CSC DYW
Sbjct: 611 KTAPGTPIRVFKNLRVCGDCHRAIKFISAIEKREIIVRDTTRFHHFRNGFCSCGDYW 667
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 146/319 (45%), Gaps = 71/319 (22%)
Query: 1 MPERNVVSWTAMVRGYVE-EGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRL 59
M R V+W M+ GY + G + EA LF ++PE + VS+ +ML ++R ++ A
Sbjct: 99 MSVRTTVTWNTMLSGYTKVAGKVKEAHELFDKIPEPDSVSYNIMLVCYLRSYGVEAALAF 158
Query: 60 FDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNN------ 113
F+ MP KD+ + ++ G+ Q+G++ + ++F MP+KN +SW+ MISGYV +
Sbjct: 159 FNKMPVKDIASWNTLISGFAQNGQMQKAFDLFSVMPEKNGVSWSAMISGYVEHGDLEAAE 218
Query: 114 -------------------------RIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQD 148
++++A ++F+ M KN V+W +M+ GY + R +D
Sbjct: 219 ELYKNVGMKSVVVETAMLTGYMKFGKVELAERIFQRMAVKNLVTWNSMIAGYVENCRAED 278
Query: 149 AWELFK-------------------------AMPM--------------KSVVASNSMIL 169
++FK A+P+ K A S+I
Sbjct: 279 GLKVFKTMIESRVRPNPLSLSSVLLGCSNLSALPLGRQMHQLVSKSPLSKDTTACTSLIS 338
Query: 170 GLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPS 229
+ G++ A +F +M KD +W+ MI Y + G + + LF M+ ++ ++ +
Sbjct: 339 MYCKCGDLDSAWKLFLEMPRKDVISWNAMISGYAQHGAGRKALHLFDKMRNGTMKPDWIT 398
Query: 230 LISVLSVCASLASLDHGRQ 248
++V+ C +D G Q
Sbjct: 399 FVAVILACNHAGFVDLGVQ 417
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 70/158 (44%), Gaps = 9/158 (5%)
Query: 4 RNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMM 63
++ + T+++ Y + G + A LF +MP K+V+SW M+ G+ + A LFD M
Sbjct: 328 KDTTACTSLISMYCKCGDLDSAWKLFLEMPRKDVISWNAMISGYAQHGAGRKALHLFDKM 387
Query: 64 P----EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKK-----NVISWTTMISGYVNNNR 114
+ D + ++L G VD G + F M K+ + +T +I R
Sbjct: 388 RNGTMKPDWITFVAVILACNHAGFVDLGVQYFKSMKKEFGIEAKPVHYTCVIDLLGRAGR 447
Query: 115 IDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWEL 152
+D A L + MP K + L+G + + D E
Sbjct: 448 LDEAVSLIKEMPFKPHAAIYGTLLGACRIHKNLDLAEF 485
>gi|449458990|ref|XP_004147229.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Cucumis sativus]
Length = 667
Score = 524 bits (1350), Expect = e-146, Method: Compositional matrix adjust.
Identities = 262/597 (43%), Positives = 378/597 (63%), Gaps = 2/597 (0%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIR-DSRIDDARRLFDMM 63
+VVS + +V + A +F +M + V+W ML G+ + ++ +A LFD +
Sbjct: 72 DVVSLNKTIASFVRACDLESARNVFEKMSVRTTVTWNTMLSGYTKVAGKVKEAHELFDKI 131
Query: 64 PEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFE 123
PE D V+ M++ Y + V F++MP K++ SW T+ISG+ N ++ A LF
Sbjct: 132 PEPDSVSYNIMLVCYLRSYGVKAALAFFNKMPVKDIASWNTLISGFAQNGQMQKAFDLFS 191
Query: 124 VMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVV 183
VMPEKN VSW+AM+ GY + G ++ A EL+K + MKSVV +M+ G + G+V+ A +
Sbjct: 192 VMPEKNGVSWSAMISGYVEHGDLEAAEELYKNVGMKSVVVETAMLTGYMKFGKVELAERI 251
Query: 184 FDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASL 243
F +M K+ TW+ MI Y + + +F M + VR N SL SVL C++L++L
Sbjct: 252 FQRMAVKNLVTWNSMIAGYVENCRAEDGLKVFKTMIESRVRPNPLSLSSVLLGCSNLSAL 311
Query: 244 DHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGY 303
GRQ+H + + D + LI+MY KCG+L +F KD++ WN++ISGY
Sbjct: 312 PLGRQMHQLVSKSPLSKDTTACTSLISMYCKCGDLDSAWKLFLEMPRKDVITWNAMISGY 371
Query: 304 AQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPK 363
AQ+G G K+L +F +M + + PD +T V V+ AC++ G V G + F+SMK ++ +E K
Sbjct: 372 AQHGAGRKALHLFDKMRNGTMKPDWITFVAVILACNHAGFVDLGVQYFKSMKKEFGIEAK 431
Query: 364 TEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLL 423
HY C++DLLGRAG++++A+ LI+ MPF P A I+G+LLGACR H LDLAE AA+ LL
Sbjct: 432 PVHYTCVIDLLGRAGRLDEAVSLIKEMPFTPHAAIYGTLLGACRIHKNLDLAEFAARNLL 491
Query: 424 QLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRD 483
L+P +A Y+ L+NIYA+ ++ VA++RK M++ NV+K PG SWIE++ H F D
Sbjct: 492 NLDPTSATGYVQLANIYAATNKWDQVAKVRKMMKEHNVVKIPGYSWIEIKSVTHEFRSSD 551
Query: 484 CVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLV 543
+ HPE I + L ++ G ++ AGY PD F LHDV+EE K L +HSEKLA+A+GL+
Sbjct: 552 RL-HPELTSIHKKLNELDGKMKLAGYVPDLEFALHDVEEEHKEKLLLWHSEKLAIAFGLM 610
Query: 544 KLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
K G PIRV KNLRVCGDCH AIK IS + REII+RD RFHHF++G CSC DYW
Sbjct: 611 KTAPGTPIRVFKNLRVCGDCHRAIKFISAIEKREIIVRDTTRFHHFRNGFCSCGDYW 667
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 145/319 (45%), Gaps = 71/319 (22%)
Query: 1 MPERNVVSWTAMVRGYVE-EGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRL 59
M R V+W M+ GY + G + EA LF ++PE + VS+ +ML ++R + A
Sbjct: 99 MSVRTTVTWNTMLSGYTKVAGKVKEAHELFDKIPEPDSVSYNIMLVCYLRSYGVKAALAF 158
Query: 60 FDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNN------ 113
F+ MP KD+ + ++ G+ Q+G++ + ++F MP+KN +SW+ MISGYV +
Sbjct: 159 FNKMPVKDIASWNTLISGFAQNGQMQKAFDLFSVMPEKNGVSWSAMISGYVEHGDLEAAE 218
Query: 114 -------------------------RIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQD 148
++++A ++F+ M KN V+W +M+ GY + R +D
Sbjct: 219 ELYKNVGMKSVVVETAMLTGYMKFGKVELAERIFQRMAVKNLVTWNSMIAGYVENCRAED 278
Query: 149 AWELFK-------------------------AMPM--------------KSVVASNSMIL 169
++FK A+P+ K A S+I
Sbjct: 279 GLKVFKTMIESRVRPNPLSLSSVLLGCSNLSALPLGRQMHQLVSKSPLSKDTTACTSLIS 338
Query: 170 GLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPS 229
+ G++ A +F +M KD TW+ MI Y + G + + LF M+ ++ ++ +
Sbjct: 339 MYCKCGDLDSAWKLFLEMPRKDVITWNAMISGYAQHGAGRKALHLFDKMRNGTMKPDWIT 398
Query: 230 LISVLSVCASLASLDHGRQ 248
++V+ C +D G Q
Sbjct: 399 FVAVILACNHAGFVDLGVQ 417
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 69/158 (43%), Gaps = 9/158 (5%)
Query: 4 RNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMM 63
++ + T+++ Y + G + A LF +MP K+V++W M+ G+ + A LFD M
Sbjct: 328 KDTTACTSLISMYCKCGDLDSAWKLFLEMPRKDVITWNAMISGYAQHGAGRKALHLFDKM 387
Query: 64 P----EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKK-----NVISWTTMISGYVNNNR 114
+ D + ++L G VD G + F M K+ + +T +I R
Sbjct: 388 RNGTMKPDWITFVAVILACNHAGFVDLGVQYFKSMKKEFGIEAKPVHYTCVIDLLGRAGR 447
Query: 115 IDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWEL 152
+D A L + MP + L+G + + D E
Sbjct: 448 LDEAVSLIKEMPFTPHAAIYGTLLGACRIHKNLDLAEF 485
>gi|225449732|ref|XP_002267472.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02750-like
[Vitis vinifera]
Length = 1058
Score = 517 bits (1332), Expect = e-144, Method: Compositional matrix adjust.
Identities = 255/642 (39%), Positives = 389/642 (60%), Gaps = 47/642 (7%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MPERN SWT M+ + + G + +A L+ ++PE+ V + T M+ + + RI AR +F
Sbjct: 422 MPERNEYSWTTMIAAFAQCGRLDDAIQLYERVPEQTVATKTAMMTAYAQVGRIQKARLIF 481
Query: 61 DMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARK 120
D + +VVA ++ GY Q+G + E +++F +MP KN SW MI+G+V N +R+
Sbjct: 482 DEILNPNVVAWNAIIAGYTQNGMLKEAKDLFQKMPVKNSASWAAMIAGFVQNEE---SRE 538
Query: 121 LFEVMPE-------KNEVSWTAMLMG---------------------------------- 139
E++ E ++ S+T+ L
Sbjct: 539 ALELLIELHRSGSVPSDSSFTSALSACANIGDVEIGRVIHSLAIKTGCQFNSYVMNGLIS 598
Query: 140 -YTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGM 198
Y +CG ++D +F+ + +K V+ NS+I GL +N + ARVVF++M ++D +W+ +
Sbjct: 599 MYAKCGNVEDGSHVFRTIRVKDTVSWNSLISGLSENYMLDDARVVFEKMPKRDVVSWTAI 658
Query: 199 IKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQF 258
I Y + G+ +DLF M G++ N ++ S+LS C +L ++ G Q HA + + F
Sbjct: 659 ISAYVQAGHGEVALDLFLDMLARGIKPNQLTVTSLLSACGNLGAIKLGEQFHALIFKLGF 718
Query: 259 DVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHE 318
D ++V + LITMY KCG G +F+ D++ WN+++ G AQ GLG++++K+F +
Sbjct: 719 DTFLFVGNSLITMYFKCG-YEDGFCVFEEMPEHDLITWNAVLVGCAQNGLGKEAIKIFEQ 777
Query: 319 MFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAG 378
M G++PD ++ +GVL ACS+ G V EG F SM KY + P HY CMVDLLGRAG
Sbjct: 778 MEVEGILPDQMSFLGVLCACSHAGLVDEGWAHFNSMTQKYGIMPLVYHYTCMVDLLGRAG 837
Query: 379 QVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSN 438
+ +A LIE MP +PD++IW +LLGACR H ++L + A++L Q+ + Y+LLSN
Sbjct: 838 YLSEAEALIENMPVKPDSVIWEALLGACRIHRNVELGQRVAERLFQMTKPKSATYVLLSN 897
Query: 439 IYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLE 498
++ASQG + VAE+RK M+ + + K PG SWI+V+ K+H F D +H + I L+
Sbjct: 898 LFASQGMWDKVAEIRKLMKDQGLTKEPGISWIQVKNKLHCFVTGD-RTHDQIEEIYSALK 956
Query: 499 KIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLR 558
+ G R GY PD++FVLHDV+EE+K + L YHSEKLAV +G++ P G PI+++KNLR
Sbjct: 957 EYYGCFRATGYMPDTNFVLHDVEEEQKQNELLYHSEKLAVVFGILSTPNGSPIQIIKNLR 1016
Query: 559 VCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
+CGDCH+ +K +SKV R+II+RD NRFHHF+DG CSC DYW
Sbjct: 1017 ICGDCHTFMKFMSKVTLRKIIIRDGNRFHHFRDGSCSCGDYW 1058
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 155/504 (30%), Positives = 244/504 (48%), Gaps = 80/504 (15%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSR-------- 52
MPE+NV SW ++V GY ++EA LF QMPE+N VSW VM+ G++ S
Sbjct: 290 MPEKNVASWNSVVTGYCHCYRMSEARELFDQMPERNSVSWMVMISGYVHISDYWEAWDVF 349
Query: 53 ------------------------IDDARRLFDMMP-------EKDVVAQTNMVLGYCQD 81
+DD + + P E DVV + ++ Y ++
Sbjct: 350 VKMCRTVARPDQSIFVVVLSAITGLDDLELIGSLRPIAIKTGYEGDVVVGSAILNAYTRN 409
Query: 82 GRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYT 141
G +D F+ MP++N SWTTMI+ + R+D A +L+E +PE+ + TAM+ Y
Sbjct: 410 GSLDLAMHFFETMPERNEYSWTTMIAAFAQCGRLDDAIQLYERVPEQTVATKTAMMTAYA 469
Query: 142 QCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKV 201
Q GRIQ A +F + +VVA N++I G QNG +++A+ +F +M K+ A+W+ MI
Sbjct: 470 QVGRIQKARLIFDEILNPNVVAWNAIIAGYTQNGMLKEAKDLFQKMPVKNSASWAAMIAG 529
Query: 202 YERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVR--CQFD 259
+ + E ++L + + G + S S LS CA++ ++ GR +H+ ++ CQF+
Sbjct: 530 FVQNEESREALELLIELHRSGSVPSDSSFTSALSACANIGDVEIGRVIHSLAIKTGCQFN 589
Query: 260 VDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISG----------------- 302
YV + LI+MY KCG + G +F KD V WNS+ISG
Sbjct: 590 S--YVMNGLISMYAKCGNVEDGSHVFRTIRVKDTVSWNSLISGLSENYMLDDARVVFEKM 647
Query: 303 --------------YAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGR 348
Y Q G GE +L +F +M + G+ P+ +T+ +LSAC G +K G
Sbjct: 648 PKRDVVSWTAIISAYVQAGHGEVALDLFLDMLARGIKPNQLTVTSLLSACGNLGAIKLG- 706
Query: 349 EIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRT 408
E F ++ K + ++ + + G ED + E MP E D I W ++L C
Sbjct: 707 EQFHALIFKLGFDTFLFVGNSLITMYFKCG-YEDGFCVFEEMP-EHDLITWNAVLVGCAQ 764
Query: 409 HMKLDLAEVAAKKLLQLEPKNAGP 432
+ L + A K Q+E + P
Sbjct: 765 N---GLGKEAIKIFEQMEVEGILP 785
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 143/503 (28%), Positives = 244/503 (48%), Gaps = 53/503 (10%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
M +R+VVSW +M+ GY + G + EA LF KN+ +WT++L G+ ++ RI++AR +F
Sbjct: 197 MIQRDVVSWNSMINGYSQNGKVDEARLLFDAFVGKNIRTWTILLTGYAKEGRIEEAREVF 256
Query: 61 DMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARK 120
+ M E++VV+ M+ GY Q+G + R++FDEMP+KNV SW ++++GY + R+ AR+
Sbjct: 257 ESMTERNVVSWNAMISGYVQNGDLKNARKLFDEMPEKNVASWNSVVTGYCHCYRMSEARE 316
Query: 121 LFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAM------PMKSV-VASNSMILGLGQ 173
LF+ MPE+N VSW M+ GY +AW++F M P +S+ V S I GL
Sbjct: 317 LFDQMPERNSVSWMVMISGYVHISDYWEAWDVFVKMCRTVARPDQSIFVVVLSAITGLDD 376
Query: 174 NGEVQKAR-VVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLIS 232
+ R + E D S ++ Y R G + F M + N S +
Sbjct: 377 LELIGSLRPIAIKTGYEGDVVVGSAILNAYTRNGSLDLAMHFFETMPER----NEYSWTT 432
Query: 233 VLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKD 292
+++ A LD Q++ ++ + V + ++T Y + G + K +LIFD + +
Sbjct: 433 MIAAFAQCGRLDDAIQLYERVP----EQTVATKTAMMTAYAQVGRIQKARLIFDEILNPN 488
Query: 293 IVMWNSIISGYAQYGL-------------------------------GEKSLKVFHEMFS 321
+V WN+II+GY Q G+ ++L++ E+
Sbjct: 489 VVAWNAIIAGYTQNGMLKEAKDLFQKMPVKNSASWAAMIAGFVQNEESREALELLIELHR 548
Query: 322 SGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVE 381
SG +P D + LSAC+ G V+ GR + S+ K + + ++ + + G VE
Sbjct: 549 SGSVPSDSSFTSALSACANIGDVEIGR-VIHSLAIKTGCQFNSYVMNGLISMYAKCGNVE 607
Query: 382 DAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYA 441
D + + + D + W SL+ + LD A V +K+ + ++ + + + Y
Sbjct: 608 DGSHVFRTIRVK-DTVSWNSLISGLSENYMLDDARVVFEKMPK---RDVVSWTAIISAYV 663
Query: 442 SQGRFHDVAELRKNMRKRNVIKP 464
G +L +M R IKP
Sbjct: 664 QAGHGEVALDLFLDMLARG-IKP 685
Score = 188 bits (477), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 105/375 (28%), Positives = 197/375 (52%), Gaps = 10/375 (2%)
Query: 31 QMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREI 90
+ P+ ++ + R R+++ARR+F+ M ++DVV+ +M+ GY Q+G+VDE R +
Sbjct: 165 ETPQTHLFQCNTRIQELGRLGRVEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEARLL 224
Query: 91 FDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAW 150
FD KN+ +WT +++GY RI+ AR++FE M E+N VSW AM+ GY Q G +++A
Sbjct: 225 FDAFVGKNIRTWTILLTGYAKEGRIEEAREVFESMTERNVVSWNAMISGYVQNGDLKNAR 284
Query: 151 ELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELE 210
+LF MP K+V + NS++ G + +AR +FDQM E++ +W MI Y E
Sbjct: 285 KLFDEMPEKNVASWNSVVTGYCHCYRMSEARELFDQMPERNSVSWMVMISGYVHISDYWE 344
Query: 211 VIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLIT 270
D+F M + R + + VLS L L+ + ++ ++ DV V S ++
Sbjct: 345 AWDVFVKMCRTVARPDQSIFVVVLSAITGLDDLELIGSLRPIAIKTGYEGDVVVGSAILN 404
Query: 271 MYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVT 330
Y + G L F+ ++ W ++I+ +AQ G + +++++ + V T
Sbjct: 405 AYTRNGSLDLAMHFFETMPERNEYSWTTMIAAFAQCGRLDDAIQLYERVPEQTV----AT 460
Query: 331 LVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAM 390
+++A + G++++ R IF+ ++ P + ++ + G +++A L + M
Sbjct: 461 KTAMMTAYAQVGRIQKARLIFDE-----ILNPNVVAWNAIIAGYTQNGMLKEAKDLFQKM 515
Query: 391 PFEPDAIIWGSLLGA 405
P + A W +++
Sbjct: 516 PVKNSA-SWAAMIAG 529
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 69/317 (21%), Positives = 141/317 (44%), Gaps = 31/317 (9%)
Query: 154 KAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVID 213
K P + N+ I LG+ G V++AR VF++M ++D +W+ MI Y + G E
Sbjct: 164 KETPQTHLFQCNTRIQELGRLGRVEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEARL 223
Query: 214 LFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYI 273
LF + +R + +L+ A ++ R+V + + +V + +I+ Y+
Sbjct: 224 LFDAFVGKNIR----TWTILLTGYAKEGRIEEAREVFESMT----ERNVVSWNAMISGYV 275
Query: 274 KCGELVKGKLIFDNFASKDIVMWNSIISGYAQ-YGLGEKSLKVFHEMFSSGVMPDDVTLV 332
+ G+L + +FD K++ WNS+++GY Y + E E+F + V+ +
Sbjct: 276 QNGDLKNARKLFDEMPEKNVASWNSVVTGYCHCYRMSEA-----RELFDQMPERNSVSWM 330
Query: 333 GVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAM-- 390
++S + E ++F M + + P + ++ + D ++LI ++
Sbjct: 331 VMISGYVHISDYWEAWDVFVKM-CRTVARPDQSIFVVVLSAITGL----DDLELIGSLRP 385
Query: 391 -----PFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEP-KNAGPYILLSNIYASQG 444
+E D ++ ++L A + LDL A + P +N + + +A G
Sbjct: 386 IAIKTGYEGDVVVGSAILNAYTRNGSLDL----AMHFFETMPERNEYSWTTMIAAFAQCG 441
Query: 445 RFHDVAELRKNMRKRNV 461
R D +L + + ++ V
Sbjct: 442 RLDDAIQLYERVPEQTV 458
>gi|224071204|ref|XP_002303374.1| predicted protein [Populus trichocarpa]
gi|222840806|gb|EEE78353.1| predicted protein [Populus trichocarpa]
Length = 569
Score = 514 bits (1325), Expect = e-143, Method: Compositional matrix adjust.
Identities = 259/570 (45%), Positives = 360/570 (63%), Gaps = 2/570 (0%)
Query: 32 MPEKNVVSWTVMLGGFIRD-SRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREI 90
M K V+W +L G + ++ +A+ LF +PE D V+ M+ Y ++ ++ +
Sbjct: 1 MTLKTTVTWNSVLAGMSKKRGKLKEAQELFVKIPEPDAVSYNTMLSCYVRNSNMERAQAF 60
Query: 91 FDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAW 150
F++MP K+ SW TMI+G+ N ++D AR LF +MP KN V+W AM+ GY +CG + A
Sbjct: 61 FEDMPIKDTPSWNTMITGFAQNQQMDKARDLFLIMPTKNVVTWNAMISGYVECGDLDSAL 120
Query: 151 ELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELE 210
+LF+ P KSVVA +MI G + G + A +F++M EK+ TW+ MI Y +
Sbjct: 121 KLFEKAPFKSVVAWTAMITGYMKLGRIGLAERLFEKMPEKNLVTWNAMIAGYIENHRAED 180
Query: 211 VIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLIT 270
+ LF M G++ N +L S L C+ L++L GRQVH + + D + LI+
Sbjct: 181 GVKLFRTMVGFGIQPNSSTLSSALLGCSELSALQLGRQVHQLVCKSPLCDDTTAGTSLIS 240
Query: 271 MYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVT 330
MY KCG L G +F +D+V WN++ISGYAQ+G G+K+L +F EM G+ PD +T
Sbjct: 241 MYCKCGVLEDGWKLFVQVPRRDVVTWNAMISGYAQHGEGKKALGLFDEMIEKGMKPDWIT 300
Query: 331 LVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAM 390
V VL AC++ G G + F SM Y + K +HY CMVDLLGRAG++ +A+ LIE M
Sbjct: 301 FVAVLMACNHAGFTDLGVKYFHSMAKDYGLVAKPDHYTCMVDLLGRAGKLVEAVDLIEKM 360
Query: 391 PFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVA 450
PF+P A ++G+LLGACR H ++AE A++KLL L+P +A Y+ L+N+YA+ R+ VA
Sbjct: 361 PFKPHAAVFGTLLGACRIHKNTEMAEFASQKLLNLDPASATGYVQLANVYAATKRWDHVA 420
Query: 451 ELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYC 510
+RK+M+ V+K PG SWIEV+ H F D HPE I L+++ ++ AGY
Sbjct: 421 RVRKSMKSCKVVKTPGYSWIEVKSMAHQFRSGDKF-HPELASIHGKLKELEKKMKLAGYV 479
Query: 511 PDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLI 570
PD F LHDV EE+K L +HSEKLA+AYGL+KLP G PIRV KNLRVCGDCH AIK I
Sbjct: 480 PDLEFALHDVGEEQKEQLLLWHSEKLAIAYGLIKLPPGTPIRVFKNLRVCGDCHRAIKYI 539
Query: 571 SKVMGREIILRDANRFHHFKDGLCSCRDYW 600
S++ REII+RD RFHHFKDG CSC DYW
Sbjct: 540 SQIERREIIVRDTTRFHHFKDGHCSCADYW 569
>gi|328774749|gb|AEB39774.1| pentatricopeptide repeat protein 65 [Funaria hygrometrica]
Length = 771
Score = 513 bits (1322), Expect = e-143, Method: Compositional matrix adjust.
Identities = 253/616 (41%), Positives = 392/616 (63%), Gaps = 21/616 (3%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQM------PEKNVVSWTVMLGGFIRDSRIDDA 56
+RN+VSWTAM+ +V EA + M P+K V++ +L F +
Sbjct: 159 DRNIVSWTAMIEAFVAGNQNLEAYKCYETMKLAGCKPDK--VTFVSLLNAFTNPELLQVG 216
Query: 57 RRLFDMMPEKDVVAQ----TNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+++ + + + + T++V Y + G + + + IFD++P+KNV++WT +I+GY
Sbjct: 217 QKVHMEIAKAGLELEPRVGTSLVGMYAKCGDISKAQVIFDKLPEKNVVTWTLLIAGYAQQ 276
Query: 113 NRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAMPM----KSVVAS 164
++DVA +L E M + N++++T++L G T ++ ++ + + + +
Sbjct: 277 GQVDVALELLEKMQQAEVAPNKITYTSILQGCTTPLALEHGKKVHRYIIQSGYGREIWVV 336
Query: 165 NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVR 224
N++I + G +++AR +F + +D TW+ M+ Y + G+ E IDLF MQ++G++
Sbjct: 337 NALITMYCKCGGLKEARKLFGDLPHRDVVTWTAMVTGYAQLGFHDEAIDLFRRMQQQGIK 396
Query: 225 VNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLI 284
+ + S L+ C+S A L G+ +H QLV + +DVY+ S L++MY KCG + +L+
Sbjct: 397 PDKMTFTSALTSCSSPAFLQEGKSIHQQLVHAGYSLDVYLQSALVSMYAKCGSMDDARLV 456
Query: 285 FDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKV 344
F+ + +++V W ++I+G AQ+G ++L+ F +M G+ PD VT VLSAC++ G V
Sbjct: 457 FNQMSERNVVAWTAMITGCAQHGRCREALEYFEQMKKQGIKPDKVTFTSVLSACTHVGLV 516
Query: 345 KEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLG 404
+EGR+ F SM Y ++P EHY+C VDLLGRAG +E+A +I MPF+P +WG+LL
Sbjct: 517 EEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILTMPFQPGPSVWGALLS 576
Query: 405 ACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKP 464
ACR H ++ E AA+ +L+L+P + G Y+ LSNIYA+ GR+ D ++R+ M KR+V+K
Sbjct: 577 ACRIHSDVERGERAAENVLKLDPDDDGAYVALSNIYAAAGRYEDAEKVRQVMEKRDVVKE 636
Query: 465 PGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEE 524
PG SWIEV+ KVH+F D SHPE I L K+ ++E GY PD+ FVLHDVDEE+
Sbjct: 637 PGQSWIEVDGKVHVFHVED-KSHPEAKEIYAELGKLTEQIKEQGYVPDTRFVLHDVDEEQ 695
Query: 525 KVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDAN 584
KV +L HSE+LA+ YGL+K P G PIR++KNLRVCGDCH+A K ISKV+GREII RDA+
Sbjct: 696 KVQTLCSHSERLAITYGLMKTPPGTPIRIVKNLRVCGDCHTASKFISKVVGREIIARDAH 755
Query: 585 RFHHFKDGLCSCRDYW 600
RFHHF DG+CSC D+W
Sbjct: 756 RFHHFVDGVCSCGDFW 771
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 142/264 (53%), Gaps = 16/264 (6%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEK----NVVSWTVMLGGFIRDSRIDDA 56
+PE+NVV+WT ++ GY ++G + A L +M + N +++T +L G ++
Sbjct: 258 LPEKNVVTWTLLIAGYAQQGQVDVALELLEKMQQAEVAPNKITYTSILQGCTTPLALEHG 317
Query: 57 RRLFDMMPE----KDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYV-- 110
+++ + + +++ ++ YC+ G + E R++F ++P ++V++WT M++GY
Sbjct: 318 KKVHRYIIQSGYGREIWVVNALITMYCKCGGLKEARKLFGDLPHRDVVTWTAMVTGYAQL 377
Query: 111 --NNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDA----WELFKAMPMKSVVAS 164
++ ID+ R++ + + +++++T+ L + +Q+ +L A V
Sbjct: 378 GFHDEAIDLFRRMQQQGIKPDKMTFTSALTSCSSPAFLQEGKSIHQQLVHAGYSLDVYLQ 437
Query: 165 NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVR 224
++++ + G + AR+VF+QM E++ W+ MI + G E ++ F M+K+G++
Sbjct: 438 SALVSMYAKCGSMDDARLVFNQMSERNVVAWTAMITGCAQHGRCREALEYFEQMKKQGIK 497
Query: 225 VNFPSLISVLSVCASLASLDHGRQ 248
+ + SVLS C + ++ GR+
Sbjct: 498 PDKVTFTSVLSACTHVGLVEEGRK 521
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/341 (23%), Positives = 162/341 (47%), Gaps = 33/341 (9%)
Query: 67 DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMP 126
D +A + V C+ GR+ E I + M ++ T + S DV R L +
Sbjct: 60 DTLANSGDVSILCKQGRLKEALGILNTM----ILQGTRVYS--------DVFRGLLQ--- 104
Query: 127 EKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQ 186
A L Q + A + K+ + N+++ + G + AR VFD
Sbjct: 105 ------ECARLRSLEQGREVHAA--ILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDG 156
Query: 187 MREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHG 246
+R+++ +W+ MI+ + LE + M+ G + + + +S+L+ + L G
Sbjct: 157 IRDRNIVSWTAMIEAFVAGNQNLEAYKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQVG 216
Query: 247 RQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQY 306
++VH ++ + +++ V + L+ MY KCG++ K ++IFD K++V W +I+GYAQ
Sbjct: 217 QKVHMEIAKAGLELEPRVGTSLVGMYAKCGDISKAQVIFDKLPEKNVVTWTLLIAGYAQQ 276
Query: 307 GLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEH 366
G + +L++ +M + V P+ +T +L C+ ++ G+++ +Y+++
Sbjct: 277 GQVDVALELLEKMQQAEVAPNKITYTSILQGCTTPLALEHGKKV-----HRYIIQSGYGR 331
Query: 367 YACMVDLL----GRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
+V+ L + G +++A KL +P D + W +++
Sbjct: 332 EIWVVNALITMYCKCGGLKEARKLFGDLPHR-DVVTWTAMV 371
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 124/258 (48%), Gaps = 10/258 (3%)
Query: 176 EVQKARVVFDQM------REKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPS 229
E+ V DQ+ R+ D SG + + ++G E + + M +G RV
Sbjct: 39 ELTTPTVSHDQLPGNAGFRKVDTLANSGDVSILCKQGRLKEALGILNTMILQGTRVYSDV 98
Query: 230 LISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFA 289
+L CA L SL+ GR+VHA +++ + Y+ + L++MY KCG L + +FD
Sbjct: 99 FRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDGIR 158
Query: 290 SKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGRE 349
++IV W ++I + ++ K + M +G PD VT V +L+A + ++ G++
Sbjct: 159 DRNIVSWTAMIEAFVAGNQNLEAYKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQVGQK 218
Query: 350 I-FESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRT 408
+ E K+ +EP+ +V + + G + A + + +P E + + W L+
Sbjct: 219 VHMEIAKAGLELEPRVG--TSLVGMYAKCGDISKAQVIFDKLP-EKNVVTWTLLIAGYAQ 275
Query: 409 HMKLDLAEVAAKKLLQLE 426
++D+A +K+ Q E
Sbjct: 276 QGQVDVALELLEKMQQAE 293
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 115/217 (52%), Gaps = 18/217 (8%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV----VSWTVMLGGFIRDSRIDDA 56
+P R+VV+WTAMV GY + G EA LF +M ++ + +++T L + + +
Sbjct: 359 LPHRDVVTWTAMVTGYAQLGFHDEAIDLFRRMQQQGIKPDKMTFTSALTSCSSPAFLQEG 418
Query: 57 RRLFDMMPEK----DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+ + + DV Q+ +V Y + G +D+ R +F++M ++NV++WT MI+G +
Sbjct: 419 KSIHQQLVHAGYSLDVYLQSALVSMYAKCGSMDDARLVFNQMSERNVVAWTAMITGCAQH 478
Query: 113 NRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAMPM----KSVVAS 164
R A + FE M ++ ++V++T++L T G +++ + F++M + K +V
Sbjct: 479 GRCREALEYFEQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEH 538
Query: 165 NSMILG-LGQNGEVQKA-RVVFDQMREKDDATWSGMI 199
S + LG+ G +++A V+ + + W ++
Sbjct: 539 YSCFVDLLGRAGHLEEAENVILTMPFQPGPSVWGALL 575
>gi|168023826|ref|XP_001764438.1| predicted protein [Physcomitrella patens subsp. patens]
gi|54695178|dbj|BAD67154.1| PpPPR_91 [Physcomitrella patens]
gi|162684302|gb|EDQ70705.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 868
Score = 507 bits (1305), Expect = e-141, Method: Compositional matrix adjust.
Identities = 260/652 (39%), Positives = 390/652 (59%), Gaps = 53/652 (8%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEK----NVVSWTVMLGGFIRDSRIDDA 56
M ERNVVSWTA+++ + + EA L+ QM + N V++ +L ++
Sbjct: 218 MTERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISPNAVTFVSLLNSCNTPEALNRG 277
Query: 57 RRLFDMMPEK----DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMI-----S 107
RR+ + E+ D++ ++ YC+ V E REIFD M K++VISW+ MI S
Sbjct: 278 RRIHSHISERGLETDMIVANALITMYCKCNSVQEAREIFDRMSKRDVISWSAMIAGYAQS 337
Query: 108 GYVNNNRIDVARKLFEVMPEK----NEVSW------------------------------ 133
GY + ID +L E M + N+V++
Sbjct: 338 GYKDKESIDEVFQLLERMRREGVFPNKVTFMSILRACTAHGALEQGRQIHAELSKVGFEL 397
Query: 134 -----TAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMR 188
TA+ Y +CG I +A ++F M K+VVA S + + G++ A VF +M
Sbjct: 398 DRSLQTAIFNMYAKCGSIYEAEQVFSKMANKNVVAWTSFLSMYIKCGDLSSAEKVFSEMP 457
Query: 189 EKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQ 248
++ +W+ MI Y + G ++V +L + M+ EG + + ++I++L C +LA L+ G+
Sbjct: 458 TRNVVSWNLMIAGYAQNGDIVKVFELLSSMKAEGFQPDRVTVITILEACGALAGLERGKL 517
Query: 249 VHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGL 308
VHA+ V+ + D VA+ LI MY KCG++ + + +FD +++D V WN++++GY Q+G
Sbjct: 518 VHAEAVKLGLESDTVVATSLIGMYSKCGQVAEARTVFDKMSNRDTVAWNAMLAGYGQHGD 577
Query: 309 GEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYA 368
G +++ +F M V P+++TL V+SACS G V+EGREIF M+ + + P+ +HY
Sbjct: 578 GLEAVDLFKRMLKERVSPNEITLTAVISACSRAGLVQEGREIFRMMQEDFKMTPRKQHYG 637
Query: 369 CMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPK 428
CMVDLLGRAG++++A + I++MP EPD +W +LLGAC++H + LAE AA +L+LEP
Sbjct: 638 CMVDLLGRAGRLQEAEEFIQSMPCEPDISVWHALLGACKSHNNVQLAERAAHHILELEPS 697
Query: 429 NAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHP 488
A YI LSNIYA GR+ D ++R+ M R + K G S IE++ ++H F DC +HP
Sbjct: 698 YASVYITLSNIYAQAGRWDDSTKVRRVMDDRGLKKDRGESSIEIDGRIHTFVAEDC-AHP 756
Query: 489 EHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEG 548
E I LE + ++EAGY PD FVLHDVD+ +K +L +HSEKLA+AYGL+K P G
Sbjct: 757 EIDAIHAELETLTKEMKEAGYTPDMRFVLHDVDDVQKEKALCHHSEKLAIAYGLLKTPSG 816
Query: 549 VPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
PIR+MKNLRVCGDCH+A K ISK+ REI+ RDANRFH+F +G CSC D+W
Sbjct: 817 TPIRIMKNLRVCGDCHTATKFISKIRKREIVARDANRFHYFNNGTCSCGDFW 868
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 106/414 (25%), Positives = 208/414 (50%), Gaps = 18/414 (4%)
Query: 57 RRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRID 116
++L ++ E D+ +++ Y + V ++F M ++V++W++MI+ Y NN
Sbjct: 80 KQLDELGVEIDIYLGNSLINFYSKFEDVASAEQVFRRMTLRDVVTWSSMIAAYAGNNHPA 139
Query: 117 VARKLFEVMP----EKNEVSWTAMLMG---YTQCGRIQDAWELFKAMPMKSVVA-SNSMI 168
A FE M E N +++ ++L Y+ + + + KAM M++ VA + ++I
Sbjct: 140 KAFDTFERMTDANIEPNRITFLSILKACNNYSILEKGRKIHTIVKAMGMETDVAVATALI 199
Query: 169 LGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFP 228
+ GE+ A VF +M E++ +W+ +I+ + E +L+ M + G+ N
Sbjct: 200 TMYSKCGEISVACEVFHKMTERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISPNAV 259
Query: 229 SLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNF 288
+ +S+L+ C + +L+ GR++H+ + + D+ VA+ LITMY KC + + + IFD
Sbjct: 260 TFVSLLNSCNTPEALNRGRRIHSHISERGLETDMIVANALITMYCKCNSVQEAREIFDRM 319
Query: 289 ASKDIVMWNSIISGYAQYGLGEKS-----LKVFHEMFSSGVMPDDVTLVGVLSACSYTGK 343
+ +D++ W+++I+GYAQ G +K ++ M GV P+ VT + +L AC+ G
Sbjct: 320 SKRDVISWSAMIAGYAQSGYKDKESIDEVFQLLERMRREGVFPNKVTFMSILRACTAHGA 379
Query: 344 VKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
+++GR+I + SK E + ++ + G + +A ++ M + + W S L
Sbjct: 380 LEQGRQIHAEL-SKVGFELDRSLQTAIFNMYAKCGSIYEAEQVFSKMA-NKNVVAWTSFL 437
Query: 404 GACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMR 457
++K A K ++ +N + L+ YA G V EL +M+
Sbjct: 438 S---MYIKCGDLSSAEKVFSEMPTRNVVSWNLMIAGYAQNGDIVKVFELLSSMK 488
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 118/237 (49%), Gaps = 5/237 (2%)
Query: 204 RKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVY 263
+ G E I L ++++ G+ VN + V+ CA + G+ VH QL ++D+Y
Sbjct: 33 KAGRLREAIQLLGIIKQRGLLVNSNTYGCVIEHCAKARRFEDGKMVHKQLDELGVEIDIY 92
Query: 264 VASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSG 323
+ + LI Y K ++ + +F +D+V W+S+I+ YA K+ F M +
Sbjct: 93 LGNSLINFYSKFEDVASAEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMTDAN 152
Query: 324 VMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDA 383
+ P+ +T + +L AC+ +++GR+I +K+ + E ++ + + G++ A
Sbjct: 153 IEPNRITFLSILKACNNYSILEKGRKIHTIVKAMGM-ETDVAVATALITMYSKCGEISVA 211
Query: 384 MKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQ--LEPKNAGPYILLSN 438
++ M E + + W +++ A H KL+ A +++LQ + P NA ++ L N
Sbjct: 212 CEVFHKMT-ERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISP-NAVTFVSLLN 266
>gi|168003497|ref|XP_001754449.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694551|gb|EDQ80899.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 723
Score = 506 bits (1304), Expect = e-140, Method: Compositional matrix adjust.
Identities = 254/617 (41%), Positives = 390/617 (63%), Gaps = 22/617 (3%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQM------PEKNVVSWTVMLGGFIRDSRIDDA 56
+RN+VSWTAM+ +V EA + M P+K V++ +L F +
Sbjct: 110 DRNIVSWTAMIEAFVAGNKNLEAFKCYETMKLAGCKPDK--VTFVSLLNAFTNPELLQLG 167
Query: 57 RRLFDMMPEKDVVAQ----TNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+++ + E + + T++V Y + G + + R IFD +P+KNV++WT +I+GY
Sbjct: 168 QKVHMEIVEAGLELEPRVGTSLVGMYAKCGDISKARVIFDRLPEKNVVTWTLLIAGYAQQ 227
Query: 113 NRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAMPM----KSVVAS 164
++DVA +L E M + N++++ ++L G T ++ ++ + + + +
Sbjct: 228 GQVDVALELLETMQQAEVAPNKITFASILQGCTTPAALEHGKKVHRYIIQSGYGRELWVV 287
Query: 165 NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVR 224
NS+I + G +++AR +F + +D TW+ M+ Y + G+ E I+LF MQ++G++
Sbjct: 288 NSLITMYCKCGGLEEARKLFSDLPHRDVVTWTAMVTGYAQLGFHDEAINLFRRMQQQGIK 347
Query: 225 VNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLI 284
+ + SVL+ C+S A L G+++H QLV +++DVY+ S L++MY KCG + L+
Sbjct: 348 PDKMTFTSVLTSCSSPAFLQEGKRIHQQLVHAGYNLDVYLQSALVSMYAKCGSMDDASLV 407
Query: 285 FDNFASKDIVMWNSIISGY-AQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGK 343
F+ + +++V W +II+G AQ+G ++L+ F +M G+ PD VT VLSAC++ G
Sbjct: 408 FNQMSERNVVAWTAIITGCCAQHGRCREALEYFDQMKKQGIKPDKVTFTSVLSACTHVGL 467
Query: 344 VKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
V+EGR+ F SM Y ++P EHY+C VDLLGRAG +E+A +I +MPF P +WG+LL
Sbjct: 468 VEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILSMPFIPGPSVWGALL 527
Query: 404 GACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIK 463
ACR H ++ E AA+ +L+L+P + G Y+ LS+IYA+ GR+ D ++R+ M KR+V+K
Sbjct: 528 SACRVHSDVERGERAAENVLKLDPDDDGAYVALSSIYAAAGRYEDAEKVRQVMEKRDVVK 587
Query: 464 PPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEE 523
PG SWIEV+ KVH+F D SHPE I L K+ ++E GY PD+ FVLHDVDEE
Sbjct: 588 EPGQSWIEVDGKVHVFHVED-KSHPESEQIYVELGKLTEQIKEMGYVPDTRFVLHDVDEE 646
Query: 524 EKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDA 583
+K L HSE+LA+ YGL+K P G+PIR++KNLRVCGDCH+A K ISKV+GREII RDA
Sbjct: 647 QKERILFSHSERLAITYGLMKTPPGMPIRIVKNLRVCGDCHTATKFISKVVGREIIARDA 706
Query: 584 NRFHHFKDGLCSCRDYW 600
RFHHF DG+CSC D+W
Sbjct: 707 QRFHHFADGVCSCGDFW 723
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 97/346 (28%), Positives = 191/346 (55%), Gaps = 21/346 (6%)
Query: 78 YCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMP----EKNEVSW 133
Y + G + + R +FD + +N++SWT MI +V N+ A K +E M + ++V++
Sbjct: 92 YAKCGSLTDARRVFDSIRDRNIVSWTAMIEAFVAGNKNLEAFKCYETMKLAGCKPDKVTF 151
Query: 134 TAMLMGYTQCGRIQDAWELFKAMPMKSVVA--------SNSMILGLGQNGEVQKARVVFD 185
++L +T +Q L + + M+ V A S++ + G++ KARV+FD
Sbjct: 152 VSLLNAFTNPELLQ----LGQKVHMEIVEAGLELEPRVGTSLVGMYAKCGDISKARVIFD 207
Query: 186 QMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDH 245
++ EK+ TW+ +I Y ++G ++L MQ+ V N + S+L C + A+L+H
Sbjct: 208 RLPEKNVVTWTLLIAGYAQQGQVDVALELLETMQQAEVAPNKITFASILQGCTTPAALEH 267
Query: 246 GRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQ 305
G++VH +++ + +++V + LITMY KCG L + + +F + +D+V W ++++GYAQ
Sbjct: 268 GKKVHRYIIQSGYGRELWVVNSLITMYCKCGGLEEARKLFSDLPHRDVVTWTAMVTGYAQ 327
Query: 306 YGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESM-KSKYLVEPKT 364
G ++++ +F M G+ PD +T VL++CS ++EG+ I + + + Y ++
Sbjct: 328 LGFHDEAINLFRRMQQQGIKPDKMTFTSVLTSCSSPAFLQEGKRIHQQLVHAGYNLDVYL 387
Query: 365 EHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL-GACRTH 409
+ + +V + + G ++DA + M E + + W +++ G C H
Sbjct: 388 Q--SALVSMYAKCGSMDDASLVFNQMS-ERNVVAWTAIITGCCAQH 430
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 127/243 (52%), Gaps = 10/243 (4%)
Query: 165 NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVR 224
N+++ + G + AR VFD +R+++ +W+ MI+ + LE + M+ G +
Sbjct: 86 NTLLSMYAKCGSLTDARRVFDSIRDRNIVSWTAMIEAFVAGNKNLEAFKCYETMKLAGCK 145
Query: 225 VNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLI 284
+ + +S+L+ + L G++VH ++V +++ V + L+ MY KCG++ K ++I
Sbjct: 146 PDKVTFVSLLNAFTNPELLQLGQKVHMEIVEAGLELEPRVGTSLVGMYAKCGDISKARVI 205
Query: 285 FDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKV 344
FD K++V W +I+GYAQ G + +L++ M + V P+ +T +L C+ +
Sbjct: 206 FDRLPEKNVVTWTLLIAGYAQQGQVDVALELLETMQQAEVAPNKITFASILQGCTTPAAL 265
Query: 345 KEGREIFESMKSKYLVEPKTEH----YACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWG 400
+ G+++ +Y+++ ++ + + G +E+A KL +P D + W
Sbjct: 266 EHGKKV-----HRYIIQSGYGRELWVVNSLITMYCKCGGLEEARKLFSDLPHR-DVVTWT 319
Query: 401 SLL 403
+++
Sbjct: 320 AMV 322
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 86/410 (20%), Positives = 192/410 (46%), Gaps = 58/410 (14%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEK----NVVSWTVMLGGFIRDSRIDDA 56
+PE+NVV+WT ++ GY ++G + A L M + N +++ +L G + ++
Sbjct: 209 LPEKNVVTWTLLIAGYAQQGQVDVALELLETMQQAEVAPNKITFASILQGCTTPAALEHG 268
Query: 57 RRLFDMMPE----KDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+++ + + +++ +++ YC+ G ++E R++F ++P ++V++WT M++GY
Sbjct: 269 KKVHRYIIQSGYGRELWVVNSLITMYCKCGGLEEARKLFSDLPHRDVVTWTAMVTGYAQL 328
Query: 113 NRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDA----WELFKAMPMKSVVAS 164
D A LF M ++ +++++T++L + +Q+ +L A V
Sbjct: 329 GFHDEAINLFRRMQQQGIKPDKMTFTSVLTSCSSPAFLQEGKRIHQQLVHAGYNLDVYLQ 388
Query: 165 NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIK-VYERKGYELEVIDLFTLMQKEGV 223
++++ + G + A +VF+QM E++ W+ +I + G E ++ F M+K+G+
Sbjct: 389 SALVSMYAKCGSMDDASLVFNQMSERNVVAWTAIITGCCAQHGRCREALEYFDQMKKQGI 448
Query: 224 RVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVA--SVLITMYIKCGELVKG 281
+ + + SVLS C + ++ GR+ H + + + + V S + + + G L +
Sbjct: 449 KPDKVTFTSVLSACTHVGLVEEGRK-HFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEE- 506
Query: 282 KLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYT 341
++++++ I G + +G +LSAC
Sbjct: 507 --------AENVILSMPFIPGPSVWG-------------------------ALLSACRVH 533
Query: 342 GKVKEGREIFESMKSKYLVEPKTE-HYACMVDLLGRAGQVEDAMKLIEAM 390
V+ G E++ ++P + Y + + AG+ EDA K+ + M
Sbjct: 534 SDVERGERAAENVLK---LDPDDDGAYVALSSIYAAAGRYEDAEKVRQVM 580
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 109/218 (50%), Gaps = 4/218 (1%)
Query: 199 IKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQF 258
+ V + G E + + M +G RV +L CA L SL+ GR+VHA +++
Sbjct: 19 VSVLCKTGRLKEALGIMNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGI 78
Query: 259 DVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHE 318
+ Y+ + L++MY KCG L + +FD+ ++IV W ++I + ++ K +
Sbjct: 79 QPNRYLENTLLSMYAKCGSLTDARRVFDSIRDRNIVSWTAMIEAFVAGNKNLEAFKCYET 138
Query: 319 MFSSGVMPDDVTLVGVLSACSYTGKVKEGREI-FESMKSKYLVEPKTEHYACMVDLLGRA 377
M +G PD VT V +L+A + ++ G+++ E +++ +EP+ +V + +
Sbjct: 139 MKLAGCKPDKVTFVSLLNAFTNPELLQLGQKVHMEIVEAGLELEPRVG--TSLVGMYAKC 196
Query: 378 GQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLA 415
G + A + + +P E + + W L+ ++D+A
Sbjct: 197 GDISKARVIFDRLP-EKNVVTWTLLIAGYAQQGQVDVA 233
>gi|413946157|gb|AFW78806.1| hypothetical protein ZEAMMB73_634908 [Zea mays]
Length = 1145
Score = 506 bits (1303), Expect = e-140, Method: Compositional matrix adjust.
Identities = 259/635 (40%), Positives = 376/635 (59%), Gaps = 41/635 (6%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
M RN +W+ ++ + G I +A ++ + P K+V S T ML G R RIDDA+ LF
Sbjct: 285 MAARNEYTWSTIIAALSQAGRIDDAFAVYQRDPLKSVPSRTSMLTGLARYGRIDDAKILF 344
Query: 61 DMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARK 120
D + E +VV+ M+ GY Q+ VDE ++F+ MP +N ISW MI+GY N R + A
Sbjct: 345 DQIHEPNVVSWNAMITGYMQNEMVDEAEDLFNRMPFRNTISWAGMIAGYARNGRSEQALV 404
Query: 121 LFEVMPEK---------------------------------------NEVSWTAMLMGYT 141
+ + K N A++ Y
Sbjct: 405 SLQALHRKGMLPSLSSLTSSFFACSNIEALETGKQVHSLAVKAGCQFNSYVCNALITLYG 464
Query: 142 QCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKV 201
+ I ++F M +K V+ NS + L QN +AR VF+ M D +W+ +I
Sbjct: 465 KYRSIGSVRQIFDRMTVKDTVSYNSFMSALVQNNLFDEARDVFNNMPSPDVVSWTTIISA 524
Query: 202 YERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVD 261
+ E +++F M E N P L +L + +L + G+Q+H ++ D
Sbjct: 525 CAQADQGNEAVEIFRSMLHERELPNPPILTILLGLSGNLGAPQLGQQIHTIAIKLGMDSG 584
Query: 262 VYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFS 321
+ VA+ L++MY KC K +FD+ +DI WN+II+GYAQ+GLG ++++++ M S
Sbjct: 585 LVVANALVSMYFKCSSADSLK-VFDSMEERDIFTWNTIITGYAQHGLGREAIRMYQLMVS 643
Query: 322 SGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVE 381
+GV+P++VT VG+L ACS++G V EG + F+SM S Y + P EHYACMVDLLGRAG V+
Sbjct: 644 AGVLPNEVTFVGLLHACSHSGLVDEGHQFFKSMSSDYGLTPLLEHYACMVDLLGRAGDVQ 703
Query: 382 DAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYA 441
A I MP EPD++IW +LLGAC+ H +++ AA+KL +EP NAG Y++LSNIY+
Sbjct: 704 GAEHFIYDMPIEPDSVIWSALLGACKIHKNVEIGRRAAEKLFSIEPSNAGNYVMLSNIYS 763
Query: 442 SQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIG 501
SQG + +VA++RK M++R V K PGCSW++++ K+H F D H + I L ++
Sbjct: 764 SQGMWDEVAKVRKLMKERGVNKDPGCSWMQIKNKMHSFVTGD-EEHEQIQNIYATLWELY 822
Query: 502 GLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCG 561
LL+ GY PD+ FVLHD+DEE+K SL YHSEKLAVAYGL+ P+G+PI++MKNLR+CG
Sbjct: 823 TLLKATGYVPDTDFVLHDIDEEQKESSLLYHSEKLAVAYGLLVTPKGMPIQIMKNLRICG 882
Query: 562 DCHSAIKLISKVMGREIILRDANRFHHFKDGLCSC 596
DCH+ IK +S V REI +RD NRFHHF++G CSC
Sbjct: 883 DCHTFIKFVSSVTKREIDVRDGNRFHHFRNGSCSC 917
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 138/453 (30%), Positives = 220/453 (48%), Gaps = 83/453 (18%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
M RN V+W AMV YV+ G IT A LF MP ++V SW ML G+ +++AR LF
Sbjct: 121 MGVRNTVAWNAMVTCYVQNGDITLARKLFDAMPSRDVSSWNTMLTGYCHSQLMEEARNLF 180
Query: 61 DMMPEKDVVAQTNMVLGYC---QDGRV-DEGREIF-----DEMP---------------- 95
+ MPE++ V+ T M+ GY Q GR D R + E P
Sbjct: 181 ERMPERNGVSWTVMISGYVLIEQHGRAWDMFRTMLCEGMTPEQPNLVSVLSAVRHLGKPG 240
Query: 96 --------------KKNVISWTTMISGYVNN-NRIDVARKLFEVMPEKNEVSWTAMLMGY 140
+++V+ T +++GY + N +D A K FE M +NE +W+ ++
Sbjct: 241 ILESIHVLVHKTGFERDVVVGTAILNGYTKDVNMLDSAVKFFEGMAARNEYTWSTIIAAL 300
Query: 141 TQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMRE----------- 189
+Q GRI DA+ +++ P+KSV + SM+ GL + G + A+++FDQ+ E
Sbjct: 301 SQAGRIDDAFAVYQRDPLKSVPSRTSMLTGLARYGRIDDAKILFDQIHEPNVVSWNAMIT 360
Query: 190 --------------------KDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPS 229
++ +W+GMI Y R G + + + ++G+ + S
Sbjct: 361 GYMQNEMVDEAEDLFNRMPFRNTISWAGMIAGYARNGRSEQALVSLQALHRKGMLPSLSS 420
Query: 230 LISVLSVCASLASLDHGRQVHAQLVR--CQFDVDVYVASVLITMYIKCGELVKGKLIFDN 287
L S C+++ +L+ G+QVH+ V+ CQF + YV + LIT+Y K + + IFD
Sbjct: 421 LTSSFFACSNIEALETGKQVHSLAVKAGCQF--NSYVCNALITLYGKYRSIGSVRQIFDR 478
Query: 288 FASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEG 347
KD V +NS +S Q L +++ VF+ M S PD V+ ++SAC+ + E
Sbjct: 479 MTVKDTVSYNSFMSALVQNNLFDEARDVFNNMPS----PDVVSWTTIISACAQADQGNEA 534
Query: 348 REIFESMKSKYLVEPKTEHYACMVDLLGRAGQV 380
EIF SM L E + + + LLG +G +
Sbjct: 535 VEIFRSM----LHERELPNPPILTILLGLSGNL 563
Score = 171 bits (434), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 125/481 (25%), Positives = 221/481 (45%), Gaps = 89/481 (18%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MP R++++W +M+ Y GM +L + N+ + T++L G+ R R+ DARR+F
Sbjct: 59 MPFRDIIAWNSMIFAYCNNGMPDAGRSLADAISGGNLRTGTILLSGYARAGRVRDARRVF 118
Query: 61 DMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARK 120
D M ++ VA MV Y Q+G + R++FD MP ++V SW TM++GY ++ ++ AR
Sbjct: 119 DGMGVRNTVAWNAMVTCYVQNGDITLARKLFDAMPSRDVSSWNTMLTGYCHSQLMEEARN 178
Query: 121 LFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAM-------PMKSVVASNSMILGLGQ 173
LFE MPE+N VSWT M+ GY + AW++F+ M ++V+ S + LG+
Sbjct: 179 LFERMPERNGVSWTVMISGYVLIEQHGRAWDMFRTMLCEGMTPEQPNLVSVLSAVRHLGK 238
Query: 174 NGEVQKARVV---------------------------------FDQMREKDDATWSGMIK 200
G ++ V+ F+ M +++ TWS +I
Sbjct: 239 PGILESIHVLVHKTGFERDVVVGTAILNGYTKDVNMLDSAVKFFEGMAARNEYTWSTIIA 298
Query: 201 VYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDV 260
+ G + D F + Q++ ++ + PS S+L+ A +D + + Q+ +
Sbjct: 299 ALSQAG---RIDDAFAVYQRDPLK-SVPSRTSMLTGLARYGRIDDAKILFDQI----HEP 350
Query: 261 DVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMF 320
+V + +IT Y++ + + + +F+ ++ + W +I+GYA+ G E++L +
Sbjct: 351 NVVSWNAMITGYMQNEMVDEAEDLFNRMPFRNTISWAGMIAGYARNGRSEQALVSLQALH 410
Query: 321 SSGVMPDDVTLVGVLSACSY-----TGK------VKEG---------------------- 347
G++P +L ACS TGK VK G
Sbjct: 411 RKGMLPSLSSLTSSFFACSNIEALETGKQVHSLAVKAGCQFNSYVCNALITLYGKYRSIG 470
Query: 348 --REIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
R+IF+ M K T Y + L + ++A + MP PD + W +++ A
Sbjct: 471 SVRQIFDRMTVK-----DTVSYNSFMSALVQNNLFDEARDVFNNMP-SPDVVSWTTIISA 524
Query: 406 C 406
C
Sbjct: 525 C 525
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 102/375 (27%), Positives = 189/375 (50%), Gaps = 11/375 (2%)
Query: 49 RDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISG 108
R R+ +AR +FD MP +D++A +M+ YC +G D GR + D + N+ + T ++SG
Sbjct: 45 RLGRLHEAREVFDSMPFRDIIAWNSMIFAYCNNGMPDAGRSLADAISGGNLRTGTILLSG 104
Query: 109 YVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMI 168
Y R+ AR++F+ M +N V+W AM+ Y Q G I A +LF AMP + V + N+M+
Sbjct: 105 YARAGRVRDARRVFDGMGVRNTVAWNAMVTCYVQNGDITLARKLFDAMPSRDVSSWNTML 164
Query: 169 LGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFP 228
G + +++AR +F++M E++ +W+ MI Y D+F M EG+ P
Sbjct: 165 TGYCHSQLMEEARNLFERMPERNGVSWTVMISGYVLIEQHGRAWDMFRTMLCEGMTPEQP 224
Query: 229 SLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKL-IFDN 287
+L+SVLS L +H + + F+ DV V + ++ Y K ++ + F+
Sbjct: 225 NLVSVLSAVRHLGKPGILESIHVLVHKTGFERDVVVGTAILNGYTKDVNMLDSAVKFFEG 284
Query: 288 FASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEG 347
A+++ W++II+ +Q G + + V+ V P ++ L+ + G++ +
Sbjct: 285 MAARNEYTWSTIIAALSQAGRIDDAFAVYQRDPLKSV-PSRTSM---LTGLARYGRIDDA 340
Query: 348 REIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACR 407
+ +F+ + EP + M+ + V++A L MPF + I W ++
Sbjct: 341 KILFDQIH-----EPNVVSWNAMITGYMQNEMVDEAEDLFNRMPFR-NTISWAGMIAGYA 394
Query: 408 THMKLDLAEVAAKKL 422
+ + + A V+ + L
Sbjct: 395 RNGRSEQALVSLQAL 409
>gi|328774755|gb|AEB39777.1| pentatricopeptide repeat protein 91 [Funaria hygrometrica]
Length = 890
Score = 502 bits (1293), Expect = e-139, Method: Compositional matrix adjust.
Identities = 258/652 (39%), Positives = 390/652 (59%), Gaps = 53/652 (8%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEK----NVVSWTVMLGGFIRDSRIDDA 56
M ERNVVSWTA+++ + + EA L+ +M + N V++ +L ++
Sbjct: 240 MKERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISPNAVTFVSLLNSCNTPEALNRG 299
Query: 57 RRLFDMMPEK----DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMI-----S 107
RR+ + E+ DVV ++ YC+ + + RE FD M K++VISW+ MI S
Sbjct: 300 RRIHSHISERGLETDVVVANALITMYCKCNCIQDARETFDRMSKRDVISWSAMIAGYAQS 359
Query: 108 GYVNNNRIDVARKLFEVMPEK----NEVSW------------------------------ 133
GY + +D +L E M + N+V++
Sbjct: 360 GYQDKESLDEVFQLLERMRREGVFPNKVTFMSILKACSVHGALEQGRQIHAEISKVGFES 419
Query: 134 -----TAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMR 188
TA+ Y +CG I +A ++F M K+VVA S++ + G++ A VF +M
Sbjct: 420 DRSLQTAIFNMYAKCGSIYEAEQVFSKMENKNVVAWASLLTMYIKCGDLTSAEKVFSEMS 479
Query: 189 EKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQ 248
++ +W+ MI Y + G +V +L + M+ EG + + ++IS+L C +L++L+ G+
Sbjct: 480 TRNVVSWNLMIAGYAQSGDIAKVFELLSSMKVEGFQPDRVTIISILEACGALSALERGKL 539
Query: 249 VHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGL 308
VHA+ V+ + D VA+ LI MY KCGE+ + + +FD +++D V WN++++GY Q+G+
Sbjct: 540 VHAEAVKLGLESDTVVATSLIGMYSKCGEVTEARTVFDKISNRDTVAWNAMLAGYGQHGI 599
Query: 309 GEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYA 368
G +++ +F M V P+++T V+SAC G V+EGREIF M+ + ++P +HY
Sbjct: 600 GPEAVDLFKRMLKERVPPNEITFTAVISACGRAGLVQEGREIFRIMQEDFRMKPGKQHYG 659
Query: 369 CMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPK 428
CMVDLLGRAG++++A + I+ MP EPD +W +LLGAC++H + LAE AA +L+LEP
Sbjct: 660 CMVDLLGRAGRLQEAEEFIQRMPCEPDISVWHALLGACKSHDNVQLAEWAAHHILRLEPS 719
Query: 429 NAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHP 488
NA Y+ LSNIYA GR+ D ++RK M + + K G S IE++ ++H F DC +HP
Sbjct: 720 NASVYVTLSNIYAQAGRWDDSTKVRKVMDDKGLKKDRGESSIEIDGRIHTFVAEDC-AHP 778
Query: 489 EHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEG 548
E I LE + ++EAGY PD FVLHDVDE +K +L +HSEKLA+AYGL+K P G
Sbjct: 779 EIDSIHAELEMLTKEMKEAGYTPDMRFVLHDVDEVQKERALCHHSEKLAIAYGLLKTPPG 838
Query: 549 VPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
PIR+MKNLRVCGDCH+A K ISK+ REI+ RDANRFH+FK+G CSC D+W
Sbjct: 839 TPIRIMKNLRVCGDCHTATKFISKIRKREIVARDANRFHYFKNGTCSCGDFW 890
Score = 168 bits (425), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 109/423 (25%), Positives = 209/423 (49%), Gaps = 22/423 (5%)
Query: 52 RIDDARRLFDMMPEK----DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMIS 107
R +D + + + E D+ +++ Y + G V ++F M ++V++W++MI+
Sbjct: 93 RFEDGKMVHKQLDELGLAIDIYLGNSLINFYSKFGDVASVEQVFRRMTLRDVVTWSSMIA 152
Query: 108 GYVNNNRIDVARKLFEVMP----EKNEVSWTAMLMGYTQCGRIQDAWEL---FKAMPMKS 160
Y NN A FE M E N +++ ++L ++ A E+ KA M++
Sbjct: 153 AYAGNNHPAKAFDTFERMKDANIEPNRITFLSILKACNNYSMLEKAREIHTVVKASGMET 212
Query: 161 VVA-SNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQ 219
VA + ++I + GE+ A +F +M+E++ +W+ +I+ + E +L+ M
Sbjct: 213 DVAVATALITMYSKCGEISLACEIFQKMKERNVVSWTAIIQANAQHRKLNEAFELYEKML 272
Query: 220 KEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELV 279
+ G+ N + +S+L+ C + +L+ GR++H+ + + DV VA+ LITMY KC +
Sbjct: 273 QAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDVVVANALITMYCKCNCIQ 332
Query: 280 KGKLIFDNFASKDIVMWNSIISGYAQYGLGEKS-----LKVFHEMFSSGVMPDDVTLVGV 334
+ FD + +D++ W+++I+GYAQ G +K ++ M GV P+ VT + +
Sbjct: 333 DARETFDRMSKRDVISWSAMIAGYAQSGYQDKESLDEVFQLLERMRREGVFPNKVTFMSI 392
Query: 335 LSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEP 394
L ACS G +++GR+I + SK E + ++ + G + +A ++ M
Sbjct: 393 LKACSVHGALEQGRQIHAEI-SKVGFESDRSLQTAIFNMYAKCGSIYEAEQVFSKME-NK 450
Query: 395 DAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRK 454
+ + W SLL ++K A K ++ +N + L+ YA G V EL
Sbjct: 451 NVVAWASLL---TMYIKCGDLTSAEKVFSEMSTRNVVSWNLMIAGYAQSGDIAKVFELLS 507
Query: 455 NMR 457
+M+
Sbjct: 508 SMK 510
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 117/231 (50%), Gaps = 5/231 (2%)
Query: 210 EVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLI 269
E I L ++++ G+ VN + ++ CA L + G+ VH QL +D+Y+ + LI
Sbjct: 61 EAIQLLGIIKQRGLLVNSNTYGCIIEHCAKLRRFEDGKMVHKQLDELGLAIDIYLGNSLI 120
Query: 270 TMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDV 329
Y K G++ + +F +D+V W+S+I+ YA K+ F M + + P+ +
Sbjct: 121 NFYSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMKDANIEPNRI 180
Query: 330 TLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEA 389
T + +L AC+ +++ REI +K+ + E ++ + + G++ A ++ +
Sbjct: 181 TFLSILKACNNYSMLEKAREIHTVVKASGM-ETDVAVATALITMYSKCGEISLACEIFQK 239
Query: 390 MPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQ--LEPKNAGPYILLSN 438
M E + + W +++ A H KL+ A +K+LQ + P NA ++ L N
Sbjct: 240 MK-ERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISP-NAVTFVSLLN 288
>gi|297740626|emb|CBI30808.3| unnamed protein product [Vitis vinifera]
Length = 660
Score = 494 bits (1272), Expect = e-137, Method: Compositional matrix adjust.
Identities = 256/637 (40%), Positives = 377/637 (59%), Gaps = 42/637 (6%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMP 64
+V +T M+ GY A LF++MP K+VVSW M+ G + + AR+LFD MP
Sbjct: 25 DVYLYTMMITGYARNYRFDHALQLFYEMPVKDVVSWNSMIKGCFDCADLTMARKLFDEMP 84
Query: 65 EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEV 124
E+ VV+ T M+ G+ Q G+++ +F +MP +++ +W +MI GY N R++ +LF+
Sbjct: 85 ERSVVSWTTMINGFLQFGKIEVAEGLFYKMPFRDIAAWNSMIYGYCCNGRVEDGLRLFQE 144
Query: 125 MPEKNEVSWTAMLMGYTQCGRIQDAWELFKAM--------PMKSV--------------- 161
MP +N +SWT+M+ G Q GR ++A LF+ M P S
Sbjct: 145 MPCRNVISWTSMIGGLDQHGRSEEALGLFRQMMGCGVEVKPTSSTYCCVITACANASALY 204
Query: 162 ----VASNSMILGLGQNGEVQKARVVF--------DQMR------EKDDATWSGMIKVYE 203
+ ++ LG + + A + F D +R + W+ ++ Y
Sbjct: 205 QGVQIHAHVFKLGYSFDAYISAALITFYANCKQMEDSLRVFHGKLHMNVVIWTALVTGYG 264
Query: 204 RKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVY 263
+ + +F M +EGV N S S L+ C L +LD GR++H V+ + DV+
Sbjct: 265 LNCKHEDALKVFGEMMREGVLPNQSSFTSALNSCCGLEALDWGREIHTAAVKLGLETDVF 324
Query: 264 VASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSG 323
V + LI MY +CG L G +IF + K+IV WNS+I G AQ+G G +L F++M S
Sbjct: 325 VGNSLIVMYYRCGNLNDGVVIFKRISKKNIVSWNSVIVGCAQHGCGMWALAFFNQMVRSM 384
Query: 324 VMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDA 383
V PD++T G+LSACS++G ++GR +F+ E K +HYACMVD+LGR+G++E+A
Sbjct: 385 VEPDEITFTGLLSACSHSGMSQKGRCLFKYFSENKSAEVKLDHYACMVDILGRSGKLEEA 444
Query: 384 MKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQ 443
+LI MP + ++++W LL AC H KL++AE AAK ++ LEP + Y+LLSN+YAS
Sbjct: 445 EELIRNMPVKANSMVWLVLLSACTMHSKLEVAERAAKCIIDLEPHCSSAYVLLSNLYASA 504
Query: 444 GRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGL 503
R+ DV+ +R+ M++R + K PG SWI ++ + F D SHP I + LE +GG
Sbjct: 505 SRWSDVSRIRREMKQRGITKQPGRSWITIKGWRNEFLSGD-RSHPSSDRIYQKLEWLGGK 563
Query: 504 LREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDC 563
L+E GY PD F LHDV++E+K L YHSE+LA+ +GL+ EG I VMKNLRVCGDC
Sbjct: 564 LKELGYVPDQRFALHDVEDEQKEVMLSYHSERLAIGFGLISTVEGSTITVMKNLRVCGDC 623
Query: 564 HSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
HSAIKLI+K++ R+II+RD+ RFHHF DG CSC DYW
Sbjct: 624 HSAIKLIAKIVRRKIIVRDSTRFHHFMDGRCSCGDYW 660
Score = 215 bits (548), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 118/369 (31%), Positives = 198/369 (53%), Gaps = 4/369 (1%)
Query: 43 MLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISW 102
M+ +R+ RID+AR +FD + DV T M+ GY ++ R D ++F EMP K+V+SW
Sbjct: 1 MITDHLRNQRIDEARTVFDKVSFPDVYLYTMMITGYARNYRFDHALQLFYEMPVKDVVSW 60
Query: 103 TTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVV 162
+MI G + + +ARKLF+ MPE++ VSWT M+ G+ Q G+I+ A LF MP + +
Sbjct: 61 NSMIKGCFDCADLTMARKLFDEMPERSVVSWTTMINGFLQFGKIEVAEGLFYKMPFRDIA 120
Query: 163 ASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEG 222
A NSMI G NG V+ +F +M ++ +W+ MI ++ G E + LF M G
Sbjct: 121 AWNSMIYGYCCNGRVEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFRQMMGCG 180
Query: 223 VRVNFPS--LISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVK 280
V V S V++ CA+ ++L G Q+HA + + + D Y+++ LIT Y C ++
Sbjct: 181 VEVKPTSSTYCCVITACANASALYQGVQIHAHVFKLGYSFDAYISAALITFYANCKQMED 240
Query: 281 GKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSY 340
+F ++V+W ++++GY E +LKVF EM GV+P+ + L++C
Sbjct: 241 SLRVFHGKLHMNVVIWTALVTGYGLNCKHEDALKVFGEMMREGVLPNQSSFTSALNSCCG 300
Query: 341 TGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWG 400
+ GREI + K +E ++ + R G + D + + + + + + + W
Sbjct: 301 LEALDWGREI-HTAAVKLGLETDVFVGNSLIVMYYRCGNLNDGVVIFKRIS-KKNIVSWN 358
Query: 401 SLLGACRTH 409
S++ C H
Sbjct: 359 SVIVGCAQH 367
>gi|359483597|ref|XP_002272690.2| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
mitochondrial [Vitis vinifera]
Length = 676
Score = 494 bits (1272), Expect = e-137, Method: Compositional matrix adjust.
Identities = 256/637 (40%), Positives = 377/637 (59%), Gaps = 42/637 (6%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMP 64
+V +T M+ GY A LF++MP K+VVSW M+ G + + AR+LFD MP
Sbjct: 41 DVYLYTMMITGYARNYRFDHALQLFYEMPVKDVVSWNSMIKGCFDCADLTMARKLFDEMP 100
Query: 65 EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEV 124
E+ VV+ T M+ G+ Q G+++ +F +MP +++ +W +MI GY N R++ +LF+
Sbjct: 101 ERSVVSWTTMINGFLQFGKIEVAEGLFYKMPFRDIAAWNSMIYGYCCNGRVEDGLRLFQE 160
Query: 125 MPEKNEVSWTAMLMGYTQCGRIQDAWELFKAM--------PMKSV--------------- 161
MP +N +SWT+M+ G Q GR ++A LF+ M P S
Sbjct: 161 MPCRNVISWTSMIGGLDQHGRSEEALGLFRQMMGCGVEVKPTSSTYCCVITACANASALY 220
Query: 162 ----VASNSMILGLGQNGEVQKARVVF--------DQMR------EKDDATWSGMIKVYE 203
+ ++ LG + + A + F D +R + W+ ++ Y
Sbjct: 221 QGVQIHAHVFKLGYSFDAYISAALITFYANCKQMEDSLRVFHGKLHMNVVIWTALVTGYG 280
Query: 204 RKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVY 263
+ + +F M +EGV N S S L+ C L +LD GR++H V+ + DV+
Sbjct: 281 LNCKHEDALKVFGEMMREGVLPNQSSFTSALNSCCGLEALDWGREIHTAAVKLGLETDVF 340
Query: 264 VASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSG 323
V + LI MY +CG L G +IF + K+IV WNS+I G AQ+G G +L F++M S
Sbjct: 341 VGNSLIVMYYRCGNLNDGVVIFKRISKKNIVSWNSVIVGCAQHGCGMWALAFFNQMVRSM 400
Query: 324 VMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDA 383
V PD++T G+LSACS++G ++GR +F+ E K +HYACMVD+LGR+G++E+A
Sbjct: 401 VEPDEITFTGLLSACSHSGMSQKGRCLFKYFSENKSAEVKLDHYACMVDILGRSGKLEEA 460
Query: 384 MKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQ 443
+LI MP + ++++W LL AC H KL++AE AAK ++ LEP + Y+LLSN+YAS
Sbjct: 461 EELIRNMPVKANSMVWLVLLSACTMHSKLEVAERAAKCIIDLEPHCSSAYVLLSNLYASA 520
Query: 444 GRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGL 503
R+ DV+ +R+ M++R + K PG SWI ++ + F D SHP I + LE +GG
Sbjct: 521 SRWSDVSRIRREMKQRGITKQPGRSWITIKGWRNEFLSGD-RSHPSSDRIYQKLEWLGGK 579
Query: 504 LREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDC 563
L+E GY PD F LHDV++E+K L YHSE+LA+ +GL+ EG I VMKNLRVCGDC
Sbjct: 580 LKELGYVPDQRFALHDVEDEQKEVMLSYHSERLAIGFGLISTVEGSTITVMKNLRVCGDC 639
Query: 564 HSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
HSAIKLI+K++ R+II+RD+ RFHHF DG CSC DYW
Sbjct: 640 HSAIKLIAKIVRRKIIVRDSTRFHHFMDGRCSCGDYW 676
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 119/373 (31%), Positives = 200/373 (53%), Gaps = 4/373 (1%)
Query: 39 SWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKN 98
S+ M+ +R+ RID+AR +FD + DV T M+ GY ++ R D ++F EMP K+
Sbjct: 13 SYQSMITDHLRNQRIDEARTVFDKVSFPDVYLYTMMITGYARNYRFDHALQLFYEMPVKD 72
Query: 99 VISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPM 158
V+SW +MI G + + +ARKLF+ MPE++ VSWT M+ G+ Q G+I+ A LF MP
Sbjct: 73 VVSWNSMIKGCFDCADLTMARKLFDEMPERSVVSWTTMINGFLQFGKIEVAEGLFYKMPF 132
Query: 159 KSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLM 218
+ + A NSMI G NG V+ +F +M ++ +W+ MI ++ G E + LF M
Sbjct: 133 RDIAAWNSMIYGYCCNGRVEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFRQM 192
Query: 219 QKEGVRVNFPS--LISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCG 276
GV V S V++ CA+ ++L G Q+HA + + + D Y+++ LIT Y C
Sbjct: 193 MGCGVEVKPTSSTYCCVITACANASALYQGVQIHAHVFKLGYSFDAYISAALITFYANCK 252
Query: 277 ELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLS 336
++ +F ++V+W ++++GY E +LKVF EM GV+P+ + L+
Sbjct: 253 QMEDSLRVFHGKLHMNVVIWTALVTGYGLNCKHEDALKVFGEMMREGVLPNQSSFTSALN 312
Query: 337 ACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDA 396
+C + GREI + K +E ++ + R G + D + + + + + +
Sbjct: 313 SCCGLEALDWGREI-HTAAVKLGLETDVFVGNSLIVMYYRCGNLNDGVVIFKRIS-KKNI 370
Query: 397 IIWGSLLGACRTH 409
+ W S++ C H
Sbjct: 371 VSWNSVIVGCAQH 383
>gi|357113684|ref|XP_003558631.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 802
Score = 493 bits (1269), Expect = e-136, Method: Compositional matrix adjust.
Identities = 271/711 (38%), Positives = 386/711 (54%), Gaps = 114/711 (16%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF-D 61
+RNV +W +++ Y + G + +A +F +MPE++ VSWTVM+ G R R +A ++F D
Sbjct: 93 QRNVFTWNSLLSLYAKSGRLADARAVFAEMPERDPVSWTVMVVGLNRVGRFGEAIKMFLD 152
Query: 62 MMPE-------------------------------------KDVVAQTNMVLG-YCQDGR 83
M+ + V N VL Y + G
Sbjct: 153 MVTDGLSPTQFTLTNVLSSCAATEARGVGRKVHSFVVKLGLSSCVPVANSVLNMYGKCGD 212
Query: 84 VDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQC 143
+ R +F+ MP+++V SW M+S + R+D+A LFE MP++ VSW A++ GY Q
Sbjct: 213 AETARAVFERMPERSVSSWNAMVSLDAHLGRMDLALSLFENMPDRTIVSWNAVIAGYNQN 272
Query: 144 GRIQDAWELFKAMPMKSVVA---------------------------------------- 163
G A F M S +A
Sbjct: 273 GLNAKALWFFSRMLSYSTMAPDEFTITSVLSACANLGMVSIGKQVHAYILRSRMPYIGQV 332
Query: 164 SNSMILGLGQNGEVQKARVV---------------------------------FDQMREK 190
+N++I ++G V+ AR V FD M +
Sbjct: 333 TNALISMYAKSGSVENARGVMQQAVMADLNVISFTALLEGYVKLGDMKHAREMFDVMSNR 392
Query: 191 DDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVH 250
D W+ MI YE+ G+ E ++LF LM + G N ++ +VLSVCASLA L++G+Q+H
Sbjct: 393 DVVAWTAMIVGYEQNGHNDEAMELFRLMIRSGPEPNSYTVAAVLSVCASLACLEYGKQIH 452
Query: 251 AQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFA-SKDIVMWNSIISGYAQYGLG 309
+ +R + V++ ++TMY + G L + +FD K+ V W S+I AQ+GLG
Sbjct: 453 CKAIRSLQEQSSSVSNSIVTMYARSGSLPWARRVFDRVHWRKETVTWTSMIVALAQHGLG 512
Query: 310 EKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYAC 369
E ++ +F EM GV PD +T VGVLSAC++ G V EG+ F+ ++ K+ + P+ HYAC
Sbjct: 513 EDAVGLFEEMLRVGVKPDRITFVGVLSACTHVGFVDEGKRYFQQLQDKHGIVPEMSHYAC 572
Query: 370 MVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKN 429
MVDLL RAG +A + I+ MP EPDAI WGSLL ACR H DLAE+AA+KLL ++P N
Sbjct: 573 MVDLLARAGLFSEAQEFIQQMPVEPDAIAWGSLLSACRVHKNADLAELAAEKLLSIDPGN 632
Query: 430 AGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPE 489
+G Y LSN+Y++ GR++D A++ K + ++V K G SW + +VH+F G D V HP+
Sbjct: 633 SGAYSALSNVYSACGRWNDAAKIWKRRKDKSVKKETGFSWTHIGNRVHVF-GADDVLHPQ 691
Query: 490 HPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGV 549
+ R K+ +++AG+ PD VLHDVD+E K L HSEKLA+A+GLV PE
Sbjct: 692 RDTVYRTAAKMWDDIKKAGFVPDLQSVLHDVDDELKEEMLSRHSEKLAIAFGLVSTPEKT 751
Query: 550 PIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
+R+MKNLRVC DCH+AIK ISKV REIILRDA RFHHFKDG CSC+DYW
Sbjct: 752 TLRIMKNLRVCNDCHTAIKFISKVADREIILRDATRFHHFKDGFCSCKDYW 802
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 98/431 (22%), Positives = 196/431 (45%), Gaps = 109/431 (25%)
Query: 86 EGREIFDEMP--KKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQC 143
E R +FDE+P ++NV +W +++S Y + R+ AR +F MPE++ VSWT M++G +
Sbjct: 81 EARRLFDEIPAAQRNVFTWNSLLSLYAKSGRLADARAVFAEMPERDPVSWTVMVVGLNRV 140
Query: 144 GRIQDAWELFKAM----------PMKSVVAS----------------------------- 164
GR +A ++F M + +V++S
Sbjct: 141 GRFGEAIKMFLDMVTDGLSPTQFTLTNVLSSCAATEARGVGRKVHSFVVKLGLSSCVPVA 200
Query: 165 NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKV----------------------- 201
NS++ G+ G+ + AR VF++M E+ ++W+ M+ +
Sbjct: 201 NSVLNMYGKCGDAETARAVFERMPERSVSSWNAMVSLDAHLGRMDLALSLFENMPDRTIV 260
Query: 202 --------YERKGYELEVIDLFT-LMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQ 252
Y + G + + F+ ++ + + ++ SVLS CA+L + G+QVHA
Sbjct: 261 SWNAVIAGYNQNGLNAKALWFFSRMLSYSTMAPDEFTITSVLSACANLGMVSIGKQVHAY 320
Query: 253 LVRCQF---------------------------------DVDVYVASVLITMYIKCGELV 279
++R + D++V + L+ Y+K G++
Sbjct: 321 ILRSRMPYIGQVTNALISMYAKSGSVENARGVMQQAVMADLNVISFTALLEGYVKLGDMK 380
Query: 280 KGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACS 339
+ +FD +++D+V W ++I GY Q G ++++++F M SG P+ T+ VLS C+
Sbjct: 381 HAREMFDVMSNRDVVAWTAMIVGYEQNGHNDEAMELFRLMIRSGPEPNSYTVAAVLSVCA 440
Query: 340 YTGKVKEGREIF-ESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAII 398
++ G++I ++++S L E + +V + R+G + A ++ + + + + +
Sbjct: 441 SLACLEYGKQIHCKAIRS--LQEQSSSVSNSIVTMYARSGSLPWARRVFDRVHWRKETVT 498
Query: 399 WGSLLGACRTH 409
W S++ A H
Sbjct: 499 WTSMIVALAQH 509
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 134/281 (47%), Gaps = 43/281 (15%)
Query: 146 IQDAWELFKAMP--MKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYE 203
++A LF +P ++V NS++ ++G + AR VF +M E+D +W+ M+
Sbjct: 79 FREARRLFDEIPAAQRNVFTWNSLLSLYAKSGRLADARAVFAEMPERDPVSWTVMVVGLN 138
Query: 204 RKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVY 263
R G E I +F M +G+ +L +VLS CA+ + GR+VH+ +V+ V
Sbjct: 139 RVGRFGEAIKMFLDMVTDGLSPTQFTLTNVLSSCAATEARGVGRKVHSFVVKLGLSSCVP 198
Query: 264 VASVLITMYIKCGELVKGKLI-------------------------------FDNFASKD 292
VA+ ++ MY KCG+ + + F+N +
Sbjct: 199 VANSVLNMYGKCGDAETARAVFERMPERSVSSWNAMVSLDAHLGRMDLALSLFENMPDRT 258
Query: 293 IVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVM-PDDVTLVGVLSACSYTGKVKEGREIF 351
IV WN++I+GY Q GL K+L F M S M PD+ T+ VLSAC+ G V G+++
Sbjct: 259 IVSWNAVIAGYNQNGLNAKALWFFSRMLSYSTMAPDEFTITSVLSACANLGMVSIGKQVH 318
Query: 352 ESMKSKYLVEPKTEHYA----CMVDLLGRAGQVEDAMKLIE 388
Y++ + + ++ + ++G VE+A +++
Sbjct: 319 -----AYILRSRMPYIGQVTNALISMYAKSGSVENARGVMQ 354
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 123/257 (47%), Gaps = 24/257 (9%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
M + NV+S+TA++ GYV+ G + A +F M ++VV+WT M+ G+ ++ D+A LF
Sbjct: 358 MADLNVISFTALLEGYVKLGDMKHAREMFDVMSNRDVVAWTAMIVGYEQNGHNDEAMELF 417
Query: 61 DMM------PEKDVVAQTNMVLGYCQD-GRVDEGREI----FDEMPKKNVISWTTMISGY 109
+M P VA VL C ++ G++I + +++ ++++ Y
Sbjct: 418 RLMIRSGPEPNSYTVAA---VLSVCASLACLEYGKQIHCKAIRSLQEQSSSVSNSIVTMY 474
Query: 110 VNNNRIDVARKLFE-VMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMI 168
+ + AR++F+ V K V+WT+M++ Q G +DA LF+ M V
Sbjct: 475 ARSGSLPWARRVFDRVHWRKETVTWTSMIVALAQHGLGEDAVGLFEEMLRVGVKPDRITF 534
Query: 169 LGL----GQNGEVQKARVVFDQMREK-----DDATWSGMIKVYERKGYELEVIDLFTLMQ 219
+G+ G V + + F Q+++K + + ++ M+ + R G E + M
Sbjct: 535 VGVLSACTHVGFVDEGKRYFQQLQDKHGIVPEMSHYACMVDLLARAGLFSEAQEFIQQMP 594
Query: 220 KEGVRVNFPSLISVLSV 236
E + + SL+S V
Sbjct: 595 VEPDAIAWGSLLSACRV 611
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 92/222 (41%), Gaps = 42/222 (18%)
Query: 233 VLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELV-----KGKLIFDN 287
+L C + A+ GR +HA+ V+ Y+ + L++ Y + + +FD
Sbjct: 29 LLQRCQTAANPGAGRAIHARAVKAGLLASAYLCNNLLSYYAGPAAGGGGGFREARRLFDE 88
Query: 288 F--ASKDIVMWNSIISGYAQYG--------------------------------LGEKSL 313
A +++ WNS++S YA+ G GE ++
Sbjct: 89 IPAAQRNVFTWNSLLSLYAKSGRLADARAVFAEMPERDPVSWTVMVVGLNRVGRFGE-AI 147
Query: 314 KVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDL 373
K+F +M + G+ P TL VLS+C+ T GR++ S K + ++++
Sbjct: 148 KMFLDMVTDGLSPTQFTLTNVLSSCAATEARGVGRKV-HSFVVKLGLSSCVPVANSVLNM 206
Query: 374 LGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLA 415
G+ G E A + E MP E W +++ ++DLA
Sbjct: 207 YGKCGDAETARAVFERMP-ERSVSSWNAMVSLDAHLGRMDLA 247
>gi|224116778|ref|XP_002331875.1| predicted protein [Populus trichocarpa]
gi|222875393|gb|EEF12524.1| predicted protein [Populus trichocarpa]
Length = 675
Score = 493 bits (1268), Expect = e-136, Method: Compositional matrix adjust.
Identities = 250/608 (41%), Positives = 370/608 (60%), Gaps = 9/608 (1%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
M R+VVSW +M++G ++ G + A LF +MPEKNV+SWT M+ G+++ R++ A+RLF
Sbjct: 69 MSVRDVVSWNSMIKGCLDCGNLGMATRLFDEMPEKNVISWTTMVNGYLKFGRVELAQRLF 128
Query: 61 DMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARK 120
M KDV A MV GY ++GRV+EG +F+EMP ++VISWT+MI G N + + A
Sbjct: 129 LDMHVKDVAAWNAMVHGYFENGRVEEGVRLFEEMPVRDVISWTSMIGGLDLNGKSEEALF 188
Query: 121 LFEVMPEKN-EVSWTAMLMGYTQCGR-------IQDAWELFKAMPMKSVVASNSMILGLG 172
+F+ M E +W+ + C +Q + K S S+I
Sbjct: 189 VFKKMLRSGVEPTWSTFACVLSACANAVEFNLGVQVHGHVVKLGCFFHEFISVSLITFYA 248
Query: 173 QNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLIS 232
+++ A +F++ K+ W+ ++ Y + + +F M K G N +
Sbjct: 249 NCMKIEHAHKIFNETLTKNVVKWTALLTAYVWNNKHQDALRVFGDMTKMGALPNQSTFSI 308
Query: 233 VLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKD 292
L C L +LD G+++H ++ + DV+V + L+ MY +CG + +F N KD
Sbjct: 309 TLKACCGLEALDKGKEIHTMAIKLGLETDVFVGNSLVVMYTECGNVNSAVAVFRNINEKD 368
Query: 293 IVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFE 352
IV WNSII G AQ+G G +L F++M GV P+++T G+LSACS +G + +GR FE
Sbjct: 369 IVSWNSIIVGSAQHGFGLWALIFFNQMIRRGVDPNEITFTGLLSACSRSGMLLKGRCFFE 428
Query: 353 SMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKL 412
+ + +HYACMVD+LGR G++++A +L+ MP + +++IW +LL ACR H L
Sbjct: 429 YISRYKSNVLRPQHYACMVDILGRCGKLDEAEELVRYMPVKANSMIWLALLSACRVHSNL 488
Query: 413 DLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEV 472
++AE AAK +L LEP + Y+LLSNIYAS GR+ DV+ +R M++ ++K PG SW+ +
Sbjct: 489 EVAERAAKHILDLEPNCSSAYVLLSNIYASAGRWADVSRMRVKMKQGGLVKQPGSSWVVL 548
Query: 473 EKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYH 532
K H F D SHP I L+ +G L+E GY PD F LHDV++E+K L +H
Sbjct: 549 RGKKHEFLSAD-RSHPLSERIYEKLDWLGKKLKEFGYVPDQKFALHDVEDEQKEEMLSFH 607
Query: 533 SEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDG 592
SE+LA+A+GLV EG I VMKNLRVCGDCHS IKL+SK++GR+I++RD+ RFHHFK+G
Sbjct: 608 SERLAIAFGLVSTVEGSTITVMKNLRVCGDCHSVIKLMSKIVGRKIVVRDSGRFHHFKNG 667
Query: 593 LCSCRDYW 600
+CSC DYW
Sbjct: 668 ICSCSDYW 675
Score = 205 bits (521), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 111/373 (29%), Positives = 197/373 (52%), Gaps = 2/373 (0%)
Query: 37 VVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPK 96
+S+T L +++ R+D AR +FD +P ++ T M+ GY ++ R+ + ++FD M
Sbjct: 12 TLSYTTSLANHLKNQRLDQARLIFDKIPSPNLHLYTKMIAGYTRNDRLCDALKLFDRMSV 71
Query: 97 KNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAM 156
++V+SW +MI G ++ + +A +LF+ MPEKN +SWT M+ GY + GR++ A LF M
Sbjct: 72 RDVVSWNSMIKGCLDCGNLGMATRLFDEMPEKNVISWTTMVNGYLKFGRVELAQRLFLDM 131
Query: 157 PMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFT 216
+K V A N+M+ G +NG V++ +F++M +D +W+ MI + G E + +F
Sbjct: 132 HVKDVAAWNAMVHGYFENGRVEEGVRLFEEMPVRDVISWTSMIGGLDLNGKSEEALFVFK 191
Query: 217 LMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCG 276
M + GV + + VLS CA+ + G QVH +V+ +++ LIT Y C
Sbjct: 192 KMLRSGVEPTWSTFACVLSACANAVEFNLGVQVHGHVVKLGCFFHEFISVSLITFYANCM 251
Query: 277 ELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLS 336
++ IF+ +K++V W ++++ Y + +L+VF +M G +P+ T L
Sbjct: 252 KIEHAHKIFNETLTKNVVKWTALLTAYVWNNKHQDALRVFGDMTKMGALPNQSTFSITLK 311
Query: 337 ACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDA 396
AC + +G+EI +M K +E +V + G V A+ + + E D
Sbjct: 312 ACCGLEALDKGKEI-HTMAIKLGLETDVFVGNSLVVMYTECGNVNSAVAVFRNIN-EKDI 369
Query: 397 IIWGSLLGACRTH 409
+ W S++ H
Sbjct: 370 VSWNSIIVGSAQH 382
>gi|356545843|ref|XP_003541343.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Glycine max]
Length = 747
Score = 491 bits (1265), Expect = e-136, Method: Compositional matrix adjust.
Identities = 255/679 (37%), Positives = 390/679 (57%), Gaps = 80/679 (11%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MP+RN+ SW ++ Y + + E +F MP +++VSW ++ + + + + +
Sbjct: 70 MPQRNLYSWNTLLSSYSKLACLPEMERVFHAMPTRDMVSWNSLISAYAGRGFLLQSVKAY 129
Query: 61 DMMPEKD------VVAQTNMVLG----------------------------------YCQ 80
++M + T ++L Y +
Sbjct: 130 NLMLYNGPFNLNRIALSTMLILASKQGCVHLGLQVHGHVVKFGFQSYVFVGSPLVDMYSK 189
Query: 81 DGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGY 140
G V R+ FDEMP+KNV+ + T+I+G + +RI+ +R+LF M EK+ +SWTAM+ G+
Sbjct: 190 TGLVFCARQAFDEMPEKNVVMYNTLIAGLMRCSRIEDSRQLFYDMQEKDSISWTAMIAGF 249
Query: 141 TQCGRIQDAWELFKAMPMK----------SVVASNSMILGLGQNGEV------------- 177
TQ G ++A +LF+ M ++ SV+ + ++ L + +V
Sbjct: 250 TQNGLDREAIDLFREMRLENLEMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYQDNI 309
Query: 178 ----------------QKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKE 221
+ A VF +M K+ +W+ M+ Y + GY E + +F MQ
Sbjct: 310 FVGSALVDMYCKCKSIKSAETVFRKMNCKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQNN 369
Query: 222 GVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKG 281
G+ + +L SV+S CA+LASL+ G Q H + + + V++ L+T+Y KCG +
Sbjct: 370 GIEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALVTLYGKCGSIEDS 429
Query: 282 KLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYT 341
+F + D V W +++SGYAQ+G ++L++F M + G PD VT +GVLSACS
Sbjct: 430 HRLFSEMSYVDEVSWTALVSGYAQFGKANETLRLFESMLAHGFKPDKVTFIGVLSACSRA 489
Query: 342 GKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGS 401
G V++G +IFESM ++ + P +HY CM+DL RAG++E+A K I MPF PDAI W S
Sbjct: 490 GLVQKGNQIFESMIKEHRIIPIEDHYTCMIDLFSRAGRLEEARKFINKMPFSPDAIGWAS 549
Query: 402 LLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNV 461
LL +CR H +++ + AA+ LL+LEP N YILLS+IYA++G++ +VA LRK MR + +
Sbjct: 550 LLSSCRFHRNMEIGKWAAESLLKLEPHNTASYILLSSIYAAKGKWEEVANLRKGMRDKGL 609
Query: 462 IKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVD 521
K PGCSWI+ + +VH+F+ D S+P I LEK+ + + GY PD + VLHDVD
Sbjct: 610 RKEPGCSWIKYKNQVHIFSADD-QSNPFSDQIYSELEKLNYKMVQEGYVPDMNSVLHDVD 668
Query: 522 EEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILR 581
+ EK+ L +HSEKLA+A+GL+ +P G+PIRV+KNLRVCGDCH+A K ISK+ REI++R
Sbjct: 669 DSEKIKMLNHHSEKLAIAFGLIFIPPGLPIRVVKNLRVCGDCHNATKYISKITQREILVR 728
Query: 582 DANRFHHFKDGLCSCRDYW 600
DA RFH FKDG CSC D+W
Sbjct: 729 DAARFHLFKDGRCSCGDFW 747
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 113/434 (26%), Positives = 202/434 (46%), Gaps = 73/434 (16%)
Query: 12 MVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQ 71
+V Y + IT A +F QMP++N+ SW +L + + + + + R+F MP +D+V+
Sbjct: 50 LVSAYAKFDRITYARRVFDQMPQRNLYSWNTLLSSYSKLACLPEMERVFHAMPTRDMVSW 109
Query: 72 TNMVLGYCQDGRVDEGREIFDEMPKK-----NVISWTTM--------------------- 105
+++ Y G + + + ++ M N I+ +TM
Sbjct: 110 NSLISAYAGRGFLLQSVKAYNLMLYNGPFNLNRIALSTMLILASKQGCVHLGLQVHGHVV 169
Query: 106 --------------ISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWE 151
+ Y + AR+ F+ MPEKN V + ++ G +C RI+D+ +
Sbjct: 170 KFGFQSYVFVGSPLVDMYSKTGLVFCARQAFDEMPEKNVVMYNTLIAGLMRCSRIEDSRQ 229
Query: 152 LFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEV 211
LF M K ++ +MI G QN G + E
Sbjct: 230 LFYDMQEKDSISWTAMIAGFTQN-------------------------------GLDREA 258
Query: 212 IDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITM 271
IDLF M+ E + ++ + SVL+ C + +L G+QVHA ++R + +++V S L+ M
Sbjct: 259 IDLFREMRLENLEMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYQDNIFVGSALVDM 318
Query: 272 YIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTL 331
Y KC + + +F K++V W +++ GY Q G E+++K+F +M ++G+ PDD TL
Sbjct: 319 YCKCKSIKSAETVFRKMNCKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQNNGIEPDDFTL 378
Query: 332 VGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMP 391
V+S+C+ ++EG + L+ T A +V L G+ G +ED+ +L M
Sbjct: 379 GSVISSCANLASLEEGAQFHCRALVSGLISFITVSNA-LVTLYGKCGSIEDSHRLFSEMS 437
Query: 392 FEPDAIIWGSLLGA 405
+ D + W +L+
Sbjct: 438 Y-VDEVSWTALVSG 450
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/359 (21%), Positives = 136/359 (37%), Gaps = 96/359 (26%)
Query: 151 ELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMRE--------------------- 189
+ KA + N+++ + + AR VFDQM +
Sbjct: 34 HIIKAFRNPEIFLLNNLVSAYAKFDRITYARRVFDQMPQRNLYSWNTLLSSYSKLACLPE 93
Query: 190 ----------KDDATWSGMIKVYERKGYELEVIDLFTLMQKEG-VRVNFPSLISVLSVCA 238
+D +W+ +I Y +G+ L+ + + LM G +N +L ++L + +
Sbjct: 94 MERVFHAMPTRDMVSWNSLISAYAGRGFLLQSVKAYNLMLYNGPFNLNRIALSTMLILAS 153
Query: 239 SLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVM--- 295
+ G QVH +V+ F V+V S L+ MY K G + + FD K++VM
Sbjct: 154 KQGCVHLGLQVHGHVVKFGFQSYVFVGSPLVDMYSKTGLVFCARQAFDEMPEKNVVMYNT 213
Query: 296 ----------------------------WNSIISGYAQYGLGEKSLKVFHEMFSSGVMPD 327
W ++I+G+ Q GL +++ +F EM + D
Sbjct: 214 LIAGLMRCSRIEDSRQLFYDMQEKDSISWTAMIAGFTQNGLDREAIDLFREMRLENLEMD 273
Query: 328 DVTLVGVLSACSYTGKVKEGREIF-------------------------ESMKSKYLVEP 362
T VL+AC ++EG+++ +S+KS V
Sbjct: 274 QYTFGSVLTACGGVMALQEGKQVHAYIIRTDYQDNIFVGSALVDMYCKCKSIKSAETVFR 333
Query: 363 KTE-----HYACMVDLLGRAGQVEDAMKLIEAMP---FEPDAIIWGSLLGACRTHMKLD 413
K + M+ G+ G E+A+K+ M EPD GS++ +C L+
Sbjct: 334 KMNCKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQNNGIEPDDFTLGSVISSCANLASLE 392
Score = 43.5 bits (101), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 19/97 (19%), Positives = 47/97 (48%)
Query: 223 VRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGK 282
V F S+ C L +++H +++ + ++++ + L++ Y K + +
Sbjct: 5 VSKQFNSMSLSNHYCELLKHCRDTKKIHCHIIKAFRNPEIFLLNNLVSAYAKFDRITYAR 64
Query: 283 LIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEM 319
+FD +++ WN+++S Y++ + +VFH M
Sbjct: 65 RVFDQMPQRNLYSWNTLLSSYSKLACLPEMERVFHAM 101
>gi|115455659|ref|NP_001051430.1| Os03g0775400 [Oryza sativa Japonica Group]
gi|24899461|gb|AAN65031.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108711328|gb|ABF99123.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113549901|dbj|BAF13344.1| Os03g0775400 [Oryza sativa Japonica Group]
gi|215741536|dbj|BAG98031.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 804
Score = 487 bits (1254), Expect = e-135, Method: Compositional matrix adjust.
Identities = 272/717 (37%), Positives = 386/717 (53%), Gaps = 122/717 (17%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDA-RRL 59
+ RNV +W +++ + + G + +A +F +MPE++ VSWTVM+ G R R +A + L
Sbjct: 93 LARRNVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTL 152
Query: 60 FDMMPEKDVVAQ---TNMV-----------------------LGYC------------QD 81
DM + Q TN++ LG C +
Sbjct: 153 LDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKC 212
Query: 82 GRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYT 141
G + +F+ MP ++V SW M+S + R+D+A LFE MP+++ VSW AM+ GY
Sbjct: 213 GDSETATTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYN 272
Query: 142 QCGRIQDAWELFKAMPMKSVVA-------------------------------------- 163
Q G A +LF M +S +A
Sbjct: 273 QNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNS 332
Query: 164 --SNSMILGLGQNGEVQKARVVFDQ---------------------------------MR 188
+N++I ++G V+ AR + DQ M
Sbjct: 333 QVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMN 392
Query: 189 EKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQ 248
+D W+ MI YE+ G E IDLF M G N +L +VLSVCASLA LD+G+Q
Sbjct: 393 NRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQ 452
Query: 249 VHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFA-SKDIVMWNSIISGYAQYG 307
+H + +R + V++ +ITMY + G + +FD K+ + W S+I AQ+G
Sbjct: 453 IHCRAIRSLLEQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHG 512
Query: 308 LGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHY 367
GE+++ +F EM +GV PD +T VGVLSACS+ G V EG+ ++ +K+++ + P+ HY
Sbjct: 513 QGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHY 572
Query: 368 ACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEP 427
ACMVDLL RAG +A + I MP EPDAI WGSLL ACR H +LAE+AA+KLL ++P
Sbjct: 573 ACMVDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDP 632
Query: 428 KNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSH 487
N+G Y ++N+Y++ GR+ D A + K +++ V K G SW + K+H+F G D V H
Sbjct: 633 NNSGAYSAIANVYSACGRWSDAARIWKARKEKAVRKETGFSWTHIRSKIHVF-GADDVVH 691
Query: 488 PE----HPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLV 543
P+ + M RM E+I G AG+ PD VLHDVD+E K L HSEKLA+A+GL+
Sbjct: 692 PQRDAVYAMAARMWEEIKG----AGFVPDLQSVLHDVDDELKEELLSRHSEKLAIAFGLI 747
Query: 544 KLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
PE +RVMKNLRVC DCH+AIK ISKV REII+RDA RFHHF+DGLCSC+DYW
Sbjct: 748 STPEKTTLRVMKNLRVCNDCHAAIKAISKVTDREIIVRDATRFHHFRDGLCSCKDYW 804
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 105/437 (24%), Positives = 191/437 (43%), Gaps = 86/437 (19%)
Query: 53 IDDARRLFDMMP--EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYV 110
+ DARRLFD +P ++V +++ + + GR+ + R +F EMP+++ +SWT M+ G
Sbjct: 81 LRDARRLFDEIPLARRNVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLN 140
Query: 111 NNNRID-----------------------------------VARK---------LFEVMP 126
R V RK L +P
Sbjct: 141 RAGRFGEAIKTLLDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVP 200
Query: 127 EKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQ 186
N V L Y +CG + A +F+ MP++SV + N+M+ G + A +F+
Sbjct: 201 VANSV-----LNMYGKCGDSETATTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFES 255
Query: 187 MREKDDATWSGMIKVYERKGYELEVIDLFTLMQKE-GVRVNFPSLISVLSVCASLASLDH 245
M ++ +W+ MI Y + G + + + LF+ M E + + ++ SVLS CA+L ++
Sbjct: 256 MPDRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRI 315
Query: 246 GRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDN------------------ 287
G+QVHA ++R + + V + LI+ Y K G + + I D
Sbjct: 316 GKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGY 375
Query: 288 ---------------FASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLV 332
++D+V W ++I GY Q G ++++ +F M + G P+ TL
Sbjct: 376 VKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLA 435
Query: 333 GVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPF 392
VLS C+ + G++I + L+E + ++ + R+G A ++ + + +
Sbjct: 436 AVLSVCASLACLDYGKQI-HCRAIRSLLEQSSSVSNAIITMYARSGSFPWARRMFDQVCW 494
Query: 393 EPDAIIWGSLLGACRTH 409
+ I W S++ A H
Sbjct: 495 RKETITWTSMIVALAQH 511
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 89/352 (25%), Positives = 166/352 (47%), Gaps = 47/352 (13%)
Query: 144 GRIQDAWELFKAMPM--KSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKV 201
G ++DA LF +P+ ++V NS++ ++G + AR VF +M E+D +W+ M+
Sbjct: 79 GGLRDARRLFDEIPLARRNVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVG 138
Query: 202 YERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVD 261
R G E I M +G +L +VLS CA + GR+VH+ +V+
Sbjct: 139 LNRAGRFGEAIKTLLDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSC 198
Query: 262 VYVASVLITMYIKCGELVKGKLI-------------------------------FDNFAS 290
V VA+ ++ MY KCG+ + F++
Sbjct: 199 VPVANSVLNMYGKCGDSETATTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPD 258
Query: 291 KDIVMWNSIISGYAQYGLGEKSLKVFHEMF-SSGVMPDDVTLVGVLSACSYTGKVKEGRE 349
+ IV WN++I+GY Q GL K+LK+F M S + PD+ T+ VLSAC+ G V+ G++
Sbjct: 259 RSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQ 318
Query: 350 IFESMKSKYLVEPKTEHYA----CMVDLLGRAGQVEDAMKLI-EAMPFEPDAIIWGSLLG 404
+ Y++ + + + ++ ++G VE+A +++ ++M + + I + +LL
Sbjct: 319 VH-----AYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALL- 372
Query: 405 ACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNM 456
++K+ E A + + ++ + + Y GR + +L ++M
Sbjct: 373 --EGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSM 422
>gi|125545880|gb|EAY92019.1| hypothetical protein OsI_13712 [Oryza sativa Indica Group]
Length = 804
Score = 486 bits (1252), Expect = e-134, Method: Compositional matrix adjust.
Identities = 272/717 (37%), Positives = 385/717 (53%), Gaps = 122/717 (17%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDA-RRL 59
+ RNV +W +++ + + G + +A +F +MPE++ VSWTVM+ G R R +A + L
Sbjct: 93 LARRNVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTL 152
Query: 60 FDMMPEKDVVAQ---TNMV-----------------------LGYC------------QD 81
DM + Q TN++ LG C +
Sbjct: 153 LDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKC 212
Query: 82 GRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYT 141
G + +F+ MP ++V SW M+S + R+D+A LFE MP ++ VSW AM+ GY
Sbjct: 213 GDAETASTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPGRSIVSWNAMIAGYN 272
Query: 142 QCGRIQDAWELFKAMPMKSVVA-------------------------------------- 163
Q G A +LF M +S +A
Sbjct: 273 QNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNS 332
Query: 164 --SNSMILGLGQNGEVQKARVVFDQ---------------------------------MR 188
+N++I ++G V+ AR + DQ M
Sbjct: 333 QVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMN 392
Query: 189 EKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQ 248
+D W+ MI YE+ G E IDLF M G N +L +VLSVCASLA LD+G+Q
Sbjct: 393 NRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQ 452
Query: 249 VHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFA-SKDIVMWNSIISGYAQYG 307
+H + +R + V++ +ITMY + G + +FD K+ + W S+I AQ+G
Sbjct: 453 IHCRAIRSLLERSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHG 512
Query: 308 LGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHY 367
GE+++ +F EM +GV PD +T VGVLSACS+ G V EG+ ++ +K+++ + P+ HY
Sbjct: 513 QGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHY 572
Query: 368 ACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEP 427
ACMVDLL RAG +A + I MP EPDAI WGSLL ACR H +LAE+AA+KLL ++P
Sbjct: 573 ACMVDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDP 632
Query: 428 KNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSH 487
N+G Y ++N+Y++ GR+ D A + K +++ V K G SW + K+H+F G D V H
Sbjct: 633 NNSGAYSAIANVYSACGRWSDAARIWKARKEKAVRKETGFSWTHIRSKIHVF-GADDVVH 691
Query: 488 PE----HPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLV 543
P+ + M RM E+I G AG+ PD VLHDVD+E K L HSEKLA+A+GL+
Sbjct: 692 PQRDAVYAMAARMWEEIKG----AGFVPDLQSVLHDVDDELKEELLSRHSEKLAIAFGLI 747
Query: 544 KLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
PE +RVMKNLRVC DCH+AIK ISKV REII+RDA RFHHF+DGLCSC+DYW
Sbjct: 748 STPEKTTLRVMKNLRVCNDCHAAIKAISKVTDREIIVRDATRFHHFRDGLCSCKDYW 804
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 103/437 (23%), Positives = 191/437 (43%), Gaps = 86/437 (19%)
Query: 53 IDDARRLFDMMP--EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYV 110
+ DARRLFD +P ++V +++ + + GR+ + R +F EMP+++ +SWT M+ G
Sbjct: 81 LRDARRLFDEIPLARRNVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLN 140
Query: 111 NNNRID-----------------------------------VARK---------LFEVMP 126
R V RK L +P
Sbjct: 141 RAGRFGEAIKTLLDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVP 200
Query: 127 EKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQ 186
N V L Y +CG + A +F+ MP++SV + N+M+ G + A +F+
Sbjct: 201 VANSV-----LNMYGKCGDAETASTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFES 255
Query: 187 MREKDDATWSGMIKVYERKGYELEVIDLFT-LMQKEGVRVNFPSLISVLSVCASLASLDH 245
M + +W+ MI Y + G + + + LF+ ++ + + + ++ SVLS CA+L ++
Sbjct: 256 MPGRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRI 315
Query: 246 GRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDN------------------ 287
G+QVHA ++R + + V + LI+ Y K G + + I D
Sbjct: 316 GKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGY 375
Query: 288 ---------------FASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLV 332
++D+V W ++I GY Q G ++++ +F M + G P+ TL
Sbjct: 376 VKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLA 435
Query: 333 GVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPF 392
VLS C+ + G++I + L+E + ++ + R+G A ++ + + +
Sbjct: 436 AVLSVCASLACLDYGKQI-HCRAIRSLLERSSSVSNAIITMYARSGSFPWARRMFDQVCW 494
Query: 393 EPDAIIWGSLLGACRTH 409
+ I W S++ A H
Sbjct: 495 RKETITWTSMIVALAQH 511
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 89/352 (25%), Positives = 166/352 (47%), Gaps = 47/352 (13%)
Query: 144 GRIQDAWELFKAMPM--KSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKV 201
G ++DA LF +P+ ++V NS++ ++G + AR VF +M E+D +W+ M+
Sbjct: 79 GGLRDARRLFDEIPLARRNVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVG 138
Query: 202 YERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVD 261
R G E I M +G +L +VLS CA + GR+VH+ +V+
Sbjct: 139 LNRAGRFGEAIKTLLDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSC 198
Query: 262 VYVASVLITMYIKCGELVKGKLI-------------------------------FDNFAS 290
V VA+ ++ MY KCG+ + F++
Sbjct: 199 VPVANSVLNMYGKCGDAETASTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPG 258
Query: 291 KDIVMWNSIISGYAQYGLGEKSLKVFHEMF-SSGVMPDDVTLVGVLSACSYTGKVKEGRE 349
+ IV WN++I+GY Q GL K+LK+F M S + PD+ T+ VLSAC+ G V+ G++
Sbjct: 259 RSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQ 318
Query: 350 IFESMKSKYLVEPKTEHYA----CMVDLLGRAGQVEDAMKLI-EAMPFEPDAIIWGSLLG 404
+ Y++ + + + ++ ++G VE+A +++ ++M + + I + +LL
Sbjct: 319 VH-----AYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALL- 372
Query: 405 ACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNM 456
++K+ E A + + ++ + + Y GR + +L ++M
Sbjct: 373 --EGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSM 422
>gi|54695180|dbj|BAD67155.1| PpPPR_98 [Physcomitrella patens]
Length = 986
Score = 486 bits (1252), Expect = e-134, Method: Compositional matrix adjust.
Identities = 246/617 (39%), Positives = 384/617 (62%), Gaps = 26/617 (4%)
Query: 4 RNVVSWTAMVRGYVEEGMITEAGTLFWQMPEK----NVVSWTVMLGGFIRDSRIDDARRL 59
RNVVSWTAM+ G+ + G I EA F +M E N V++ +LG S + +++
Sbjct: 376 RNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQI 435
Query: 60 FDMMPE----KDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRI 115
D + E D +T ++ Y + G + + +F+++ K+NV++W MI+ YV + +
Sbjct: 436 QDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQY 495
Query: 116 DVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWEL--------FKAMPMKSVVA 163
D A F+ + ++ N ++T++L + D+ EL KA +
Sbjct: 496 DNALATFQALLKEGIKPNSSTFTSIL----NVCKSSDSLELGKWVHFLIMKAGLESDLHV 551
Query: 164 SNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGV 223
SN+++ G++ A+ +F+ M ++D +W+ +I + + G D F +MQ+ G+
Sbjct: 552 SNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGI 611
Query: 224 RVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKL 283
+ + + +L+ CAS +L GR++HA + FD DV V + LI+MY KCG +
Sbjct: 612 KPDKITFTGLLNACASPEALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQ 671
Query: 284 IFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGK 343
+F K++ W S+I+GYAQ+G G+++L++F++M GV PD +T VG LSAC++ G
Sbjct: 672 VFHKLPKKNVYSWTSMIAGYAQHGRGKEALELFYQMQQEGVKPDWITFVGALSACAHAGL 731
Query: 344 VKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
++EG F+SMK ++ +EP+ EHY CMVDL GRAG + +A++ I M EPD+ +WG+LL
Sbjct: 732 IEEGLHHFQSMK-EFNIEPRMEHYGCMVDLFGRAGLLNEAVEFIIKMQVEPDSRVWGALL 790
Query: 404 GACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIK 463
GAC+ H+ ++LAE AA+K L+L+P + G +++LSNIYA+ G + +VA++RK M R V+K
Sbjct: 791 GACQVHLNVELAEKAAQKKLELDPNDNGVFVILSNIYAAAGMWKEVAKMRKVMLDRGVVK 850
Query: 464 PPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEE 523
PG SWIEV+ KVH F D +HP+ I LE++ +R+ GY PD+ +VLHDV++
Sbjct: 851 KPGQSWIEVDGKVHTFYSDD-KTHPQTEEIHAELERLHMEMRQLGYVPDTRYVLHDVEDN 909
Query: 524 EKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDA 583
EK +L YHSE+LA+ YGL+K P PI + KNLRVCGDCH+A K ISK+ R+II RD+
Sbjct: 910 EKEQALFYHSERLAITYGLLKTPPLTPIVISKNLRVCGDCHTATKFISKITKRQIIARDS 969
Query: 584 NRFHHFKDGLCSCRDYW 600
NRFHHFKDG+CSC D+W
Sbjct: 970 NRFHHFKDGVCSCGDFW 986
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 105/421 (24%), Positives = 219/421 (52%), Gaps = 23/421 (5%)
Query: 39 SWTVMLGGFIRDSRIDDARRLFDMMP----EKDVVAQTNMVLGYCQDGRVDEGREIFDEM 94
+++ +L I+ + D R+++ + + D+ + ++ Y + G ++IFD+M
Sbjct: 112 TYSALLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMRNTLINMYAKCGNTISAKQIFDDM 171
Query: 95 PKKNVISWTTMISGYVNNNRIDVARKLFEVM------PEKNEVSWTAMLMGYTQCGRIQD 148
+K+V SW ++ GYV + + A KL E M P+K ++ +ML +
Sbjct: 172 REKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKR--TFVSMLNACADARNVDK 229
Query: 149 AWELF----KAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYER 204
EL+ KA + ++I + G++ A VFD + +D TW+ MI R
Sbjct: 230 GRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLAR 289
Query: 205 KGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYV 264
G + +LF M++EGV+ + + +S+L C +L+ G++VHA++ +D ++YV
Sbjct: 290 HGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYV 349
Query: 265 ASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGV 324
+ +++MY KCG + +FD +++V W ++I+G+AQ+G +++ F++M SG+
Sbjct: 350 GTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGI 409
Query: 325 MPDDVTLVGVLSACSYTGKVKEGREIFES-MKSKYLVEPKTEHYACMVDLLGRAGQVEDA 383
P+ VT + +L ACS +K G++I + +++ Y + + ++ + + G ++DA
Sbjct: 410 EPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVR--TALLSMYAKCGSLKDA 467
Query: 384 MKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQ--LEPKNAGPYILLSNIYA 441
++ E + + + + W +++ A H + D A + LL+ ++P N+ + + N+
Sbjct: 468 HRVFEKIS-KQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKP-NSSTFTSILNVCK 525
Query: 442 S 442
S
Sbjct: 526 S 526
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 100/432 (23%), Positives = 210/432 (48%), Gaps = 20/432 (4%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVV----SWTVMLGGFIRDSRIDDA 56
M E++V SW ++ GYV+ G+ EA L QM + +V ++ ML +D
Sbjct: 171 MREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKG 230
Query: 57 RRLFDMMP----EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
R L++++ + D+ T ++ + + G + + ++FD +P +++++WT+MI+G +
Sbjct: 231 RELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARH 290
Query: 113 NRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAMPM----KSVVAS 164
R A LF+ M E+ ++V++ ++L ++ ++ M +
Sbjct: 291 GRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVG 350
Query: 165 NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVR 224
+++ + G ++ A VFD ++ ++ +W+ MI + + G E F M + G+
Sbjct: 351 TAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIE 410
Query: 225 VNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLI 284
N + +S+L C+S ++L G+Q+ ++ + D V + L++MY KCG L +
Sbjct: 411 PNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRV 470
Query: 285 FDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKV 344
F+ + +++V WN++I+ Y Q+ + +L F + G+ P+ T +L+ C + +
Sbjct: 471 FEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSL 530
Query: 345 KEGREI-FESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
+ G+ + F MK+ +E +V + G + A L MP + D + W +++
Sbjct: 531 ELGKWVHFLIMKAG--LESDLHVSNALVSMFVNCGDLMSAKNLFNDMP-KRDLVSWNTII 587
Query: 404 GACRTHMKLDLA 415
H K +A
Sbjct: 588 AGFVQHGKNQVA 599
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 106/216 (49%), Gaps = 17/216 (7%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV----VSWTVMLGGFIRDSRIDDA 56
MP+R++VSW ++ G+V+ G A F M E + +++T +L + +
Sbjct: 575 MPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEG 634
Query: 57 RRLFDMMPEK----DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
RRL ++ E DV+ T ++ Y + G +++ ++F ++PKKNV SWT+MI+GY +
Sbjct: 635 RRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKNVYSWTSMIAGYAQH 694
Query: 113 NRIDVARKLFEVMPEKN-EVSWTAMLMGYTQC---GRIQDAWELFKAMPMKSVVAS---- 164
R A +LF M ++ + W + + C G I++ F++M ++
Sbjct: 695 GRGKEALELFYQMQQEGVKPDWITFVGALSACAHAGLIEEGLHHFQSMKEFNIEPRMEHY 754
Query: 165 NSMILGLGQNGEVQKARVVFDQMR-EKDDATWSGMI 199
M+ G+ G + +A +M+ E D W ++
Sbjct: 755 GCMVDLFGRAGLLNEAVEFIIKMQVEPDSRVWGALL 790
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 79/177 (44%), Gaps = 18/177 (10%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV-VSWTVMLGGF---IRDSRIDDA 56
+P++NV SWT+M+ GY + G EA LF+QM ++ V W +G I++
Sbjct: 676 LPKKNVYSWTSMIAGYAQHGRGKEALELFYQMQQEGVKPDWITFVGALSACAHAGLIEEG 735
Query: 57 RRLFDMMPEKDVVAQTN----MVLGYCQDGRVDEGREIFDEM---PKKNVISWTTMISGY 109
F M E ++ + MV + + G ++E E +M P V W ++
Sbjct: 736 LHHFQSMKEFNIEPRMEHYGCMVDLFGRAGLLNEAVEFIIKMQVEPDSRV--WGALLGAC 793
Query: 110 VNNNRIDV----ARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVV 162
+ +++ A+K E+ P N V + + Y G ++ ++ K M + VV
Sbjct: 794 QVHLNVELAEKAAQKKLELDPNDNGV-FVILSNIYAAAGMWKEVAKMRKVMLDRGVV 849
>gi|168056582|ref|XP_001780298.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668246|gb|EDQ54857.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 986
Score = 486 bits (1252), Expect = e-134, Method: Compositional matrix adjust.
Identities = 243/613 (39%), Positives = 379/613 (61%), Gaps = 18/613 (2%)
Query: 4 RNVVSWTAMVRGYVEEGMITEAGTLFWQMPEK----NVVSWTVMLGGFIRDSRIDDARRL 59
RNVVSWTAM+ G+ + G I EA F +M E N V++ +LG S + +++
Sbjct: 376 RNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQI 435
Query: 60 FDMMPE----KDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRI 115
D + E D +T ++ Y + G + + +F+++ K+NV++W MI+ YV + +
Sbjct: 436 QDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQY 495
Query: 116 DVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWEL--------FKAMPMKSVVASNSM 167
D A F+ + ++ ++ + D+ EL KA + SN++
Sbjct: 496 DNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNAL 555
Query: 168 ILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNF 227
+ G++ A+ +F+ M ++D +W+ +I + + G D F +MQ+ G++ +
Sbjct: 556 VSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDK 615
Query: 228 PSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDN 287
+ +L+ CAS +L GR++HA + FD DV V + LI+MY KCG + +F
Sbjct: 616 ITFTGLLNACASPEALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHK 675
Query: 288 FASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEG 347
K++ W S+I+GYAQ+G G+++L++F++M GV PD +T VG LSAC++ G ++EG
Sbjct: 676 LPKKNVYSWTSMITGYAQHGRGKEALELFYQMQQEGVKPDWITFVGALSACAHAGLIEEG 735
Query: 348 REIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACR 407
F+SMK ++ +EP+ EHY CMVDL GRAG + +A++ I M EPD+ +WG+LLGAC+
Sbjct: 736 LHHFQSMK-EFNIEPRMEHYGCMVDLFGRAGLLNEAVEFIIKMQVEPDSRVWGALLGACQ 794
Query: 408 THMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGC 467
H+ ++LAE AA+K L+L+P + G +++LSNIYA+ G + +VA++RK M R V+K PG
Sbjct: 795 VHLNVELAEKAAQKKLELDPNDNGVFVILSNIYAAAGMWKEVAKMRKVMLDRGVVKKPGQ 854
Query: 468 SWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVH 527
SWIEV+ KVH F D +HP+ I LE++ +R+ GY PD+ +VLHDV++ EK
Sbjct: 855 SWIEVDGKVHTFYSDD-KTHPQTEEIHAELERLHMEMRQLGYVPDTRYVLHDVEDNEKEQ 913
Query: 528 SLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFH 587
+L YHSE+LA+ YGL+K P PI + KNLRVCGDCH+A K ISK+ R+II RD+NRFH
Sbjct: 914 ALFYHSERLAITYGLLKTPPLTPIVISKNLRVCGDCHTATKFISKITKRQIIARDSNRFH 973
Query: 588 HFKDGLCSCRDYW 600
HFKDG+CSC D+W
Sbjct: 974 HFKDGVCSCGDFW 986
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 105/421 (24%), Positives = 218/421 (51%), Gaps = 23/421 (5%)
Query: 39 SWTVMLGGFIRDSRIDDARRLFDMMP----EKDVVAQTNMVLGYCQDGRVDEGREIFDEM 94
+++ +L I+ + D R+++ + + D+ ++ Y + G ++IFD+M
Sbjct: 112 TYSALLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMWNTLINMYAKCGNTISAKQIFDDM 171
Query: 95 PKKNVISWTTMISGYVNNNRIDVARKLFEVM------PEKNEVSWTAMLMGYTQCGRIQD 148
+K+V SW ++ GYV + + A KL E M P+K ++ +ML +
Sbjct: 172 REKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKR--TFVSMLNACADARNVDK 229
Query: 149 AWELF----KAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYER 204
EL+ KA + ++I + G++ A VFD + +D TW+ MI R
Sbjct: 230 GRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLAR 289
Query: 205 KGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYV 264
G + +LF M++EGV+ + + +S+L C +L+ G++VHA++ +D ++YV
Sbjct: 290 HGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYV 349
Query: 265 ASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGV 324
+ +++MY KCG + +FD +++V W ++I+G+AQ+G +++ F++M SG+
Sbjct: 350 GTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGI 409
Query: 325 MPDDVTLVGVLSACSYTGKVKEGREIFES-MKSKYLVEPKTEHYACMVDLLGRAGQVEDA 383
P+ VT + +L ACS +K G++I + +++ Y + + ++ + + G ++DA
Sbjct: 410 EPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVR--TALLSMYAKCGSLKDA 467
Query: 384 MKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQ--LEPKNAGPYILLSNIYA 441
++ E + + + + W +++ A H + D A + LL+ ++P N+ + + N+
Sbjct: 468 HRVFEKIS-KQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKP-NSSTFTSILNVCK 525
Query: 442 S 442
S
Sbjct: 526 S 526
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 110/459 (23%), Positives = 212/459 (46%), Gaps = 51/459 (11%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMP 64
++ W ++ Y + G A +F M EK+V SW ++LGG+++ ++A +L + M
Sbjct: 144 DIFMWNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMV 203
Query: 65 EKDVVAQTNM---VLGYCQDGR-VDEGREIFDEMPK----KNVISWTTMISGYVNNNRID 116
+ V +L C D R VD+GRE+++ + K ++ T +I+ ++ I
Sbjct: 204 QDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIG 263
Query: 117 VARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMP------------------- 157
A K+F+ +P ++ V+WT+M+ G + GR + A LF+ M
Sbjct: 264 DATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACN 323
Query: 158 --------------MKSVVASNSMILGLG------QNGEVQKARVVFDQMREKDDATWSG 197
MK V + +G + G ++ A VFD ++ ++ +W+
Sbjct: 324 HPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTA 383
Query: 198 MIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQ 257
MI + + G E F M + G+ N + +S+L C+S ++L G+Q+ ++
Sbjct: 384 MIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAG 443
Query: 258 FDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFH 317
+ D V + L++MY KCG L +F+ + +++V WN++I+ Y Q+ + +L F
Sbjct: 444 YGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQ 503
Query: 318 EMFSSGVMPDDVTLVGVLSACSYTGKVKEGREI-FESMKSKYLVEPKTEHYACMVDLLGR 376
+ G+ P+ T +L+ C + ++ G+ + F MK+ +E +V +
Sbjct: 504 ALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAG--LESDLHVSNALVSMFVN 561
Query: 377 AGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLA 415
G + A L MP + D + W +++ H K +A
Sbjct: 562 CGDLMSAKNLFNDMP-KRDLVSWNTIIAGFVQHGKNQVA 599
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 123/246 (50%), Gaps = 11/246 (4%)
Query: 174 NGEVQKAR-VVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLIS 232
+G K R VVF +++ A + ++ + G E + + + +++ + +
Sbjct: 58 SGRCPKGRCVVFADIKDTQKA--NAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSA 115
Query: 233 VLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKD 292
+L +C +L G +++ + + D+++ + LI MY KCG + K IFD+ KD
Sbjct: 116 LLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMWNTLINMYAKCGNTISAKQIFDDMREKD 175
Query: 293 IVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFE 352
+ WN ++ GY Q+GL E++ K+ +M V PD T V +L+AC+ V +GRE++
Sbjct: 176 VYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYN 235
Query: 353 -SMKSKYLVEPKTEHY--ACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTH 409
+K+ + T+ + ++++ + G + DA K+ + +P D + W S++ H
Sbjct: 236 LILKAGW----DTDLFVGTALINMHIKCGDIGDATKVFDNLPTR-DLVTWTSMITGLARH 290
Query: 410 MKLDLA 415
+ A
Sbjct: 291 GRFKQA 296
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 106/216 (49%), Gaps = 17/216 (7%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV----VSWTVMLGGFIRDSRIDDA 56
MP+R++VSW ++ G+V+ G A F M E + +++T +L + +
Sbjct: 575 MPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEG 634
Query: 57 RRLFDMMPEK----DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
RRL ++ E DV+ T ++ Y + G +++ ++F ++PKKNV SWT+MI+GY +
Sbjct: 635 RRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKNVYSWTSMITGYAQH 694
Query: 113 NRIDVARKLFEVMPEKN-EVSWTAMLMGYTQC---GRIQDAWELFKAMPMKSVVAS---- 164
R A +LF M ++ + W + + C G I++ F++M ++
Sbjct: 695 GRGKEALELFYQMQQEGVKPDWITFVGALSACAHAGLIEEGLHHFQSMKEFNIEPRMEHY 754
Query: 165 NSMILGLGQNGEVQKARVVFDQMR-EKDDATWSGMI 199
M+ G+ G + +A +M+ E D W ++
Sbjct: 755 GCMVDLFGRAGLLNEAVEFIIKMQVEPDSRVWGALL 790
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 79/177 (44%), Gaps = 18/177 (10%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV-VSWTVMLGGF---IRDSRIDDA 56
+P++NV SWT+M+ GY + G EA LF+QM ++ V W +G I++
Sbjct: 676 LPKKNVYSWTSMITGYAQHGRGKEALELFYQMQQEGVKPDWITFVGALSACAHAGLIEEG 735
Query: 57 RRLFDMMPEKDVVAQTN----MVLGYCQDGRVDEGREIFDEM---PKKNVISWTTMISGY 109
F M E ++ + MV + + G ++E E +M P V W ++
Sbjct: 736 LHHFQSMKEFNIEPRMEHYGCMVDLFGRAGLLNEAVEFIIKMQVEPDSRV--WGALLGAC 793
Query: 110 VNNNRIDV----ARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVV 162
+ +++ A+K E+ P N V + + Y G ++ ++ K M + VV
Sbjct: 794 QVHLNVELAEKAAQKKLELDPNDNGV-FVILSNIYAAAGMWKEVAKMRKVMLDRGVV 849
>gi|328774759|gb|AEB39779.1| pentatricopeptide repeat protein 98 [Funaria hygrometrica]
Length = 980
Score = 486 bits (1250), Expect = e-134, Method: Compositional matrix adjust.
Identities = 246/616 (39%), Positives = 379/616 (61%), Gaps = 24/616 (3%)
Query: 4 RNVVSWTAMVRGYVEEGMITEAGTLFWQMPEK----NVVSWTVMLGGFIRDSRIDDARRL 59
RNVVSWTAM+ G+ + G + EA F +M E N V++ +LG R S + R++
Sbjct: 370 RNVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRPSALKQGRQI 429
Query: 60 FDMMPEKDVVA----QTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRI 115
D + + + +T ++ Y + G + + R +F+ + K+NV++W MI+ YV + +
Sbjct: 430 HDRIIKAGYITDDRVRTALLSMYAKCGSLMDARNVFERISKQNVVAWNAMITAYVQHEKY 489
Query: 116 DVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVAS--------NSM 167
D A F+ + ++ ++ + DA EL K + + A N++
Sbjct: 490 DNAVATFQALLKEGIKPDSSTFTSILNVCKSPDALELGKWVQSLIIRAGFESDLHIRNAL 549
Query: 168 ILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNF 227
+ G++ A +F+ M E+D +W+ +I + + G D F +MQ+ GV+ +
Sbjct: 550 VSMFVNCGDLMSAMNLFNDMPERDLVSWNTIIAGFVQHGENQFAFDYFKMMQESGVKPDQ 609
Query: 228 PSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDN 287
+ +L+ CAS +L GR++HA + D DV V + LI+MY KCG + L+F N
Sbjct: 610 ITFTGLLNACASPEALTEGRRLHALITEAALDCDVVVGTGLISMYTKCGSIDDAHLVFHN 669
Query: 288 FASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEG 347
K++ W S+I+GYAQ+G G+++L++F +M GV PD +T VG LSAC++ G +KEG
Sbjct: 670 LPKKNVYSWTSMITGYAQHGRGKEALELFCQMQQEGVKPDWITFVGALSACAHAGLIKEG 729
Query: 348 REIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACR 407
FESMK + +EP+ EHY CMVDL GRAG + +A++ I M +PD+ +WG+LLGAC+
Sbjct: 730 LHHFESMKD-FNIEPRMEHYGCMVDLFGRAGLLHEAVEFINKMQVKPDSRLWGALLGACQ 788
Query: 408 THMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGC 467
H+ ++LAE A+K L+L+P + G Y++LSNIYA+ G + +V ++RK M R V+K PG
Sbjct: 789 VHLDVELAEKVAQKKLELDPNDDGVYVILSNIYAAAGMWKEVTKMRKVMLDRGVVKKPGQ 848
Query: 468 SWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGL---LREAGYCPDSSFVLHDVDEEE 524
SWIEV+ +VH+F C HP I + ++G L +++ GY PD+ +VLHDV++ E
Sbjct: 849 SWIEVDGRVHIF----CSDDKTHPQIEEIHAELGRLHMEMKKLGYVPDTRYVLHDVEDSE 904
Query: 525 KVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDAN 584
K H+L +HSE+LA+AYGL+K P PI + KNLRVCGDCH+A KLISK+ R+II RD+N
Sbjct: 905 KEHALCHHSERLAIAYGLLKTPPLTPIVISKNLRVCGDCHTATKLISKITKRQIIARDSN 964
Query: 585 RFHHFKDGLCSCRDYW 600
RFHHFKDG+CSC D+W
Sbjct: 965 RFHHFKDGVCSCGDFW 980
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 108/438 (24%), Positives = 219/438 (50%), Gaps = 20/438 (4%)
Query: 4 RNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVV----SWTVMLGGFIRDSRIDDARRL 59
+N A + + G ++EA + + ++ +++ +L I+ + D R+
Sbjct: 67 KNTQRANAFLNRLSKAGQLSEAMLVLLSVDSPHIQIHRQTYSSLLQLCIKHKNLGDGERI 126
Query: 60 FDMMP----EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRI 115
+ + + D+ ++ Y + G + ++IFDEMP K+V SW ++ GYV + R
Sbjct: 127 HNHIKFSKIQPDIFMWNMLISMYAKCGNTNSAKQIFDEMPDKDVYSWNLLLGGYVQHRRY 186
Query: 116 DVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAMPM----KSVVASNSM 167
+ A +L E M + ++ ++ ML + ELF + + ++
Sbjct: 187 EEAFRLHEQMVQDGVKPDKYTFVYMLNACADAKNVDKGGELFSLILNAGWDTDLFVGTAL 246
Query: 168 ILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNF 227
I + G V A VF+ + +D TW+ MI R + +LF +M++EGV+ +
Sbjct: 247 INMHIKCGGVDDALKVFNNLPRRDLITWTSMITGLARHRQFKQACNLFQVMEEEGVQPDK 306
Query: 228 PSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDN 287
+ +S+L C +L+ G++VHA++ D ++YV + L++MY KCG + +F+
Sbjct: 307 VAFVSLLKACNHPEALEQGKRVHARMKEVGLDTEIYVGTALLSMYTKCGSMEDALEVFNL 366
Query: 288 FASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEG 347
+++V W ++I+G+AQ+G E++ F++M SG+ P+ VT + +L ACS +K+G
Sbjct: 367 VKGRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRPSALKQG 426
Query: 348 REIFES-MKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGAC 406
R+I + +K+ Y+ + + ++ + + G + DA + E + + + + W +++ A
Sbjct: 427 RQIHDRIIKAGYITDDRVR--TALLSMYAKCGSLMDARNVFERIS-KQNVVAWNAMITAY 483
Query: 407 RTHMKLDLAEVAAKKLLQ 424
H K D A + LL+
Sbjct: 484 VQHEKYDNAVATFQALLK 501
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 102/452 (22%), Positives = 219/452 (48%), Gaps = 49/452 (10%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMM- 63
++ W ++ Y + G A +F +MP+K+V SW ++LGG+++ R ++A RL + M
Sbjct: 138 DIFMWNMLISMYAKCGNTNSAKQIFDEMPDKDVYSWNLLLGGYVQHRRYEEAFRLHEQMV 197
Query: 64 -----PEK---------------------------------DVVAQTNMVLGYCQDGRVD 85
P+K D+ T ++ + + G VD
Sbjct: 198 QDGVKPDKYTFVYMLNACADAKNVDKGGELFSLILNAGWDTDLFVGTALINMHIKCGGVD 257
Query: 86 EGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEK----NEVSWTAMLMGYT 141
+ ++F+ +P++++I+WT+MI+G + + A LF+VM E+ ++V++ ++L
Sbjct: 258 DALKVFNNLPRRDLITWTSMITGLARHRQFKQACNLFQVMEEEGVQPDKVAFVSLLKACN 317
Query: 142 QCGRIQDAWEL---FKAMPMKSVVASNSMILGL-GQNGEVQKARVVFDQMREKDDATWSG 197
++ + K + + + + + +L + + G ++ A VF+ ++ ++ +W+
Sbjct: 318 HPEALEQGKRVHARMKEVGLDTEIYVGTALLSMYTKCGSMEDALEVFNLVKGRNVVSWTA 377
Query: 198 MIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQ 257
MI + + G E F M + G+ N + +S+L C+ ++L GRQ+H ++++
Sbjct: 378 MIAGFAQHGRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRPSALKQGRQIHDRIIKAG 437
Query: 258 FDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFH 317
+ D V + L++MY KCG L+ + +F+ + +++V WN++I+ Y Q+ + ++ F
Sbjct: 438 YITDDRVRTALLSMYAKCGSLMDARNVFERISKQNVVAWNAMITAYVQHEKYDNAVATFQ 497
Query: 318 EMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRA 377
+ G+ PD T +L+ C ++ G+ + +S+ + E +V +
Sbjct: 498 ALLKEGIKPDSSTFTSILNVCKSPDALELGKWV-QSLIIRAGFESDLHIRNALVSMFVNC 556
Query: 378 GQVEDAMKLIEAMPFEPDAIIWGSLLGACRTH 409
G + AM L MP E D + W +++ H
Sbjct: 557 GDLMSAMNLFNDMP-ERDLVSWNTIIAGFVQH 587
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 106/216 (49%), Gaps = 17/216 (7%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV----VSWTVMLGGFIRDSRIDDA 56
MPER++VSW ++ G+V+ G A F M E V +++T +L + +
Sbjct: 569 MPERDLVSWNTIIAGFVQHGENQFAFDYFKMMQESGVKPDQITFTGLLNACASPEALTEG 628
Query: 57 RRLFDMMPEK----DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
RRL ++ E DVV T ++ Y + G +D+ +F +PKKNV SWT+MI+GY +
Sbjct: 629 RRLHALITEAALDCDVVVGTGLISMYTKCGSIDDAHLVFHNLPKKNVYSWTSMITGYAQH 688
Query: 113 NRIDVARKLF-EVMPEKNEVSWTAMLMGYTQC---GRIQDAWELFKAMPMKSVVAS---- 164
R A +LF ++ E + W + + C G I++ F++M ++
Sbjct: 689 GRGKEALELFCQMQQEGVKPDWITFVGALSACAHAGLIKEGLHHFESMKDFNIEPRMEHY 748
Query: 165 NSMILGLGQNGEVQKARVVFDQMREKDDA-TWSGMI 199
M+ G+ G + +A ++M+ K D+ W ++
Sbjct: 749 GCMVDLFGRAGLLHEAVEFINKMQVKPDSRLWGALL 784
>gi|413938666|gb|AFW73217.1| hypothetical protein ZEAMMB73_724608 [Zea mays]
Length = 610
Score = 485 bits (1249), Expect = e-134, Method: Compositional matrix adjust.
Identities = 243/596 (40%), Positives = 365/596 (61%), Gaps = 6/596 (1%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDS---RIDDARRLFDMMPEK 66
T V V G + A F K ++ +L G+ + S R+ DARRLFD +P
Sbjct: 16 TVAVAAAVRRGDLAGAEEAFASTQLKTTTTYNCLLAGYAKASGLIRLADARRLFDSIPHP 75
Query: 67 DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMP 126
D V+ ++ + G +D R +F MP K+V SW TM+SG N + A +F +MP
Sbjct: 76 DTVSYNTLLSCHFACGDIDGARRVFSTMPVKDVTSWNTMVSGLSKNGASEEAAAMFRIMP 135
Query: 127 EKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKS-VVASNSMILGLGQNGEVQKARVVFD 185
+N VSW AM+ G + A +LF+ P K+ + +M+ G G VQKA F
Sbjct: 136 VRNAVSWNAMVAALACSGDMGAAEDLFRNAPEKTDAILWTAMVSGYMDTGNVQKAMEFFG 195
Query: 186 QMREKDDATWSGMIKVYERKGYELEVIDLF-TLMQKEGVRVNFPSLISVLSVCASLASLD 244
M ++ +W+ ++ Y + + + +F T+++ V+ N +L SVL C++L++L
Sbjct: 196 AMPVRNLVSWNAVVAGYVKNSRADDALRVFKTMVEDSIVQPNASTLSSVLLGCSNLSALG 255
Query: 245 HGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYA 304
GRQVH ++ +V V + L++MY KCG+L +FD ++KDIV WN++ISGYA
Sbjct: 256 FGRQVHQWCMKLPLSRNVTVGTSLLSMYCKCGDLNDACKVFDEMSTKDIVAWNAMISGYA 315
Query: 305 QYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKT 364
Q+G G +++K+F +M GV+PD +TL+ VL+AC +TG G + FE+M+ Y +EP+
Sbjct: 316 QHGGGMQAIKLFEKMKDEGVVPDWITLLAVLTACIHTGLCDFGIQCFETMQEAYKIEPQI 375
Query: 365 EHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQ 424
+HY+CMVDLL RAG +E A+ +I +MPFEP +G+LL ACR + L+ AE AA+KL++
Sbjct: 376 DHYSCMVDLLCRAGLLERAVNMIHSMPFEPHPSAYGTLLTACRVYKNLEFAEFAARKLIE 435
Query: 425 LEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDC 484
+P+NAG Y+ L+NIYA ++ DV+ +R+ M+ V+K PG SW+E++ H F D
Sbjct: 436 QDPQNAGAYVQLANIYAVANKWADVSRVRRWMKDNAVVKTPGYSWMEIKGVRHEFRSNDR 495
Query: 485 VSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVK 544
+ HP+ +I L+++ L++ GY PD F LHDV++ K L HSEKLA+A+GL+
Sbjct: 496 L-HPQLGLIHDKLDRLQMLMKAMGYVPDLDFALHDVEDSLKSQMLMRHSEKLAIAFGLIS 554
Query: 545 LPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
G+ +R+ KNLR+CGDCH+A KLISK+ REIILRD RFHHF+ G CSC DYW
Sbjct: 555 TSPGMTLRIFKNLRICGDCHNAAKLISKIEDREIILRDTTRFHHFRGGHCSCGDYW 610
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 133/289 (46%), Gaps = 41/289 (14%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
+P + VS+ ++ + G I A +F MP K+V SW M+ G ++ ++A +F
Sbjct: 72 IPHPDTVSYNTLLSCHFACGDIDGARRVFSTMPVKDVTSWNTMVSGLSKNGASEEAAAMF 131
Query: 61 DMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKK-NVISWTTMISGYVNNNRIDVAR 119
+MP ++ V+ MV G + ++F P+K + I WT M+SGY++ + A
Sbjct: 132 RIMPVRNAVSWNAMVAALACSGDMGAAEDLFRNAPEKTDAILWTAMVSGYMDTGNVQKAM 191
Query: 120 KLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVV-------------ASNS 166
+ F MP +N VSW A++ GY + R DA +FK M S+V SN
Sbjct: 192 EFFGAMPVRNLVSWNAVVAGYVKNSRADDALRVFKTMVEDSIVQPNASTLSSVLLGCSNL 251
Query: 167 MILGLGQN---------------------------GEVQKARVVFDQMREKDDATWSGMI 199
LG G+ G++ A VFD+M KD W+ MI
Sbjct: 252 SALGFGRQVHQWCMKLPLSRNVTVGTSLLSMYCKCGDLNDACKVFDEMSTKDIVAWNAMI 311
Query: 200 KVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQ 248
Y + G ++ I LF M+ EGV ++ +L++VL+ C D G Q
Sbjct: 312 SGYAQHGGGMQAIKLFEKMKDEGVVPDWITLLAVLTACIHTGLCDFGIQ 360
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 84/204 (41%), Gaps = 17/204 (8%)
Query: 264 VASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSG 323
+++V + ++ G+L + F + K +N +++GYA+ G L +F S
Sbjct: 14 LSTVAVAAAVRRGDLAGAEEAFASTQLKTTTTYNCLLAGYAKAS-GLIRLADARRLFDSI 72
Query: 324 VMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDA 383
PD V+ +LS G + R +F +M K + T MV L + G E+A
Sbjct: 73 PHPDTVSYNTLLSCHFACGDIDGARRVFSTMPVKDVTSWNT-----MVSGLSKNGASEEA 127
Query: 384 MKLIEAMPFEPDAIIWGSLLG--ACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNI-- 439
+ MP +A+ W +++ AC M AA+ L + P+ + + +
Sbjct: 128 AAMFRIMPVR-NAVSWNAMVAALACSGDMG------AAEDLFRNAPEKTDAILWTAMVSG 180
Query: 440 YASQGRFHDVAELRKNMRKRNVIK 463
Y G E M RN++
Sbjct: 181 YMDTGNVQKAMEFFGAMPVRNLVS 204
>gi|449435276|ref|XP_004135421.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
gi|449493520|ref|XP_004159329.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
Length = 743
Score = 484 bits (1246), Expect = e-134, Method: Compositional matrix adjust.
Identities = 257/679 (37%), Positives = 389/679 (57%), Gaps = 80/679 (11%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
+P+ N+ SW ++ Y + G + + +F MP +VVSW +L G+ + I ++ R++
Sbjct: 66 IPQPNLFSWNTLLSAYSKLGYLQDMQRVFDSMPNHDVVSWNSLLSGYAGNGLISESVRVY 125
Query: 61 DMMPEKDVVA----------------------------------QTNMVLG------YCQ 80
+MM + V Q+ + +G Y +
Sbjct: 126 NMMLKDGSVNLNRITFSTMLILSSNRGFVDLGRQIHGQIFKFGYQSYLFVGSPLVDMYAK 185
Query: 81 DGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGY 140
G +++ IF+E+P+KN++ + TMI+G + I A +LF+ MPEK+ +SWT ++ G
Sbjct: 186 TGFINDANRIFEEIPEKNIVVYNTMITGLLRCRFIVEAEQLFDNMPEKDSISWTTIITGL 245
Query: 141 TQCGRIQDAWELFKAMPMK----------SVVASNSMILGLGQNGE-------------- 176
TQ G ++A + FK M ++ SV+ + L L + +
Sbjct: 246 TQNGLFKEAVDKFKEMGIEGFCMDQFTFGSVLTACGGFLALDEGKQIHAYIIRTDYQDNI 305
Query: 177 ---------------VQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKE 221
V+ A VF +MR K+ +W+ M+ Y + GY E + +F MQ+
Sbjct: 306 FVGSALLDMYCKCRNVKYAEAVFRKMRHKNVISWTAMLVGYGQNGYSEEAVRIFCDMQRN 365
Query: 222 GVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKG 281
+ + +L SV+S CA+LASL+ G Q H Q + V V++ LIT+Y KCG L
Sbjct: 366 EIHPDDFTLGSVISSCANLASLEEGAQFHGQALASGLICFVTVSNALITLYGKCGSLEHA 425
Query: 282 KLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYT 341
+F +D V W +++SGYAQ+G +++ +F M + G++PD VT VGVLSACS
Sbjct: 426 HQLFHEMKIRDEVSWTALVSGYAQFGKANETISLFETMLAHGIVPDGVTFVGVLSACSRA 485
Query: 342 GKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGS 401
G V++G FE M ++ + P +HY CM+DLL RAG++E+A I MPF PDAI W +
Sbjct: 486 GLVEKGYHYFECMVKEHRITPIPDHYTCMIDLLSRAGRLEEAKNFINQMPFSPDAIGWAT 545
Query: 402 LLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNV 461
LL +CR + L++ + AA+ L +LEP+N YILLS+IYA++G++ DVA+LRK MR+ V
Sbjct: 546 LLSSCRLNGNLEIGKWAAESLHKLEPQNPASYILLSSIYAAKGKWDDVAKLRKGMREMGV 605
Query: 462 IKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVD 521
K PG SWI+ + KVH+F+ D S P I LE + + E GY PD SFVLHDV+
Sbjct: 606 KKEPGHSWIKYKNKVHIFSADD-RSSPFSDQIYAKLESLYLKMIEEGYVPDMSFVLHDVE 664
Query: 522 EEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILR 581
+ EK+ L +HSEKLA+A+GL+ +P+G+ IRV+KNLRVCGDCH+A K IS++ REI++R
Sbjct: 665 KSEKIKMLNHHSEKLAIAFGLLFIPDGLQIRVVKNLRVCGDCHNATKYISRITQREILVR 724
Query: 582 DANRFHHFKDGLCSCRDYW 600
DA RFH FKDG+CSC D+W
Sbjct: 725 DAVRFHLFKDGVCSCGDFW 743
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 113/406 (27%), Positives = 213/406 (52%), Gaps = 11/406 (2%)
Query: 9 WTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDV 68
+ ++ Y + G + A +F +P+ N+ SW +L + + + D +R+FD MP DV
Sbjct: 43 YNNLINTYGKLGDLKNARNVFDHIPQPNLFSWNTLLSAYSKLGYLQDMQRVFDSMPNHDV 102
Query: 69 VAQTNMVLGYCQDGRVDEGREIFDEMPKK-----NVISWTTMISGYVNNNRIDVARKL-- 121
V+ +++ GY +G + E +++ M K N I+++TM+ N +D+ R++
Sbjct: 103 VSWNSLLSGYAGNGLISESVRVYNMMLKDGSVNLNRITFSTMLILSSNRGFVDLGRQIHG 162
Query: 122 --FEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQK 179
F+ + + ++ Y + G I DA +F+ +P K++V N+MI GL + + +
Sbjct: 163 QIFKFGYQSYLFVGSPLVDMYAKTGFINDANRIFEEIPEKNIVVYNTMITGLLRCRFIVE 222
Query: 180 ARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCAS 239
A +FD M EKD +W+ +I + G E +D F M EG ++ + SVL+ C
Sbjct: 223 AEQLFDNMPEKDSISWTTIITGLTQNGLFKEAVDKFKEMGIEGFCMDQFTFGSVLTACGG 282
Query: 240 LASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSI 299
+LD G+Q+HA ++R + +++V S L+ MY KC + + +F K+++ W ++
Sbjct: 283 FLALDEGKQIHAYIIRTDYQDNIFVGSALLDMYCKCRNVKYAEAVFRKMRHKNVISWTAM 342
Query: 300 ISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYL 359
+ GY Q G E+++++F +M + + PDD TL V+S+C+ ++EG + + L
Sbjct: 343 LVGYGQNGYSEEAVRIFCDMQRNEIHPDDFTLGSVISSCANLASLEEGAQFHGQALASGL 402
Query: 360 VEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
+ T A ++ L G+ G +E A +L M D + W +L+
Sbjct: 403 ICFVTVSNA-LITLYGKCGSLEHAHQLFHEMKIR-DEVSWTALVSG 446
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 90/208 (43%), Gaps = 42/208 (20%)
Query: 232 SVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASK 291
+ L C + +++H +++R + + ++ + LI Y K G+L + +FD+
Sbjct: 10 AALKFCCEARNRAQVKKLHCRIIRTLTNPETFLYNNLINTYGKLGDLKNARNVFDHIPQP 69
Query: 292 DIVMWNSII-------------------------------SGYAQYGLGEKSLKVFHEMF 320
++ WN+++ SGYA GL +S++V++ M
Sbjct: 70 NLFSWNTLLSAYSKLGYLQDMQRVFDSMPNHDVVSWNSLLSGYAGNGLISESVRVYNMML 129
Query: 321 SSG-VMPDDVTLVGVLSACSYTGKVKEGR----EIFESMKSKYLVEPKTEHYACMVDLLG 375
G V + +T +L S G V GR +IF+ YL +VD+
Sbjct: 130 KDGSVNLNRITFSTMLILSSNRGFVDLGRQIHGQIFKFGYQSYLFVGSP-----LVDMYA 184
Query: 376 RAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
+ G + DA ++ E +P E + +++ +++
Sbjct: 185 KTGFINDANRIFEEIP-EKNIVVYNTMI 211
>gi|242062682|ref|XP_002452630.1| hypothetical protein SORBIDRAFT_04g029423 [Sorghum bicolor]
gi|241932461|gb|EES05606.1| hypothetical protein SORBIDRAFT_04g029423 [Sorghum bicolor]
Length = 605
Score = 484 bits (1245), Expect = e-134, Method: Compositional matrix adjust.
Identities = 239/571 (41%), Positives = 355/571 (62%), Gaps = 6/571 (1%)
Query: 35 KNVVSWTVMLGGFIRDS---RIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIF 91
K ++ +L G+ + S R+ DARRLFD +P D V+ ++ + G +D +F
Sbjct: 36 KTTTTYNCLLAGYAKASGPGRLADARRLFDSIPHPDAVSYNTLLSCHFACGDIDGAWRVF 95
Query: 92 DEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWE 151
MP ++V SW TM+SG N I+ A +F MP +N VSW AM+ G + A
Sbjct: 96 STMPVRDVTSWNTMVSGLSKNGAIEEAEAMFRAMPARNAVSWNAMVAARASSGDMGAAEN 155
Query: 152 LFKAMPMKS-VVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELE 210
LF+ P K+ + +M+ G G VQKA F M ++ +W+ ++ Y + +
Sbjct: 156 LFRNAPEKTDAILWTAMVSGYMDTGNVQKAMEYFRAMPVRNLVSWNAVVAGYVKNSRAGD 215
Query: 211 VIDLF-TLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLI 269
+ +F T+++ V+ N +L SVL C++L++L GRQVH ++ + V + L+
Sbjct: 216 ALRVFKTMVEDAIVQPNPSTLSSVLLGCSNLSALGFGRQVHQWCMKLPLGRSITVGTSLL 275
Query: 270 TMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDV 329
+MY KCG+L +FD +KDIV WN++ISGYAQ+G G K++K+F +M GV+PD +
Sbjct: 276 SMYCKCGDLDDACKLFDEMHTKDIVAWNAMISGYAQHGGGRKAIKLFEKMKDEGVVPDWI 335
Query: 330 TLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEA 389
TL+ VL+AC +TG G + FE+M+ Y +EP+ +HY+CMVDLL RAG +E A+ +I +
Sbjct: 336 TLLAVLTACIHTGLCDFGIQCFETMQEAYNIEPQVDHYSCMVDLLCRAGLLERAVNMIHS 395
Query: 390 MPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDV 449
MPFEP +G+LL ACR + L+ AE AA+KL++ +P+NAG Y+ L+NIYA R+ DV
Sbjct: 396 MPFEPHPSAYGTLLTACRVYKNLEFAEFAARKLIEQDPQNAGAYVQLANIYAVANRWDDV 455
Query: 450 AELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGY 509
+ +R+ M+ V+K PG SW+E++ H F D + HP+ +I L+++G L++ GY
Sbjct: 456 SRVRRWMKDNAVVKTPGYSWMEIKGVRHEFRSNDRL-HPQLDLIHDKLDRLGKLMKAMGY 514
Query: 510 CPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKL 569
PD F LHDV+E K L HSEKLA+A+GL+ G+ +R+ KNLR+CGDCH+A KL
Sbjct: 515 SPDLDFALHDVEESLKSQMLMRHSEKLAIAFGLISTSPGMTLRIFKNLRICGDCHNAAKL 574
Query: 570 ISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
ISK+ REIILRD RFHHF+ G CSC DYW
Sbjct: 575 ISKIEDREIILRDTTRFHHFRGGHCSCGDYW 605
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 86/260 (33%), Positives = 132/260 (50%), Gaps = 14/260 (5%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MP R+V SW MV G + G I EA +F MP +N VSW M+ + A LF
Sbjct: 98 MPVRDVTSWNTMVSGLSKNGAIEEAEAMFRAMPARNAVSWNAMVAARASSGDMGAAENLF 157
Query: 61 DMMPEK-DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVAR 119
PEK D + T MV GY G V + E F MP +N++SW +++GYV N+R A
Sbjct: 158 RNAPEKTDAILWTAMVSGYMDTGNVQKAMEYFRAMPVRNLVSWNAVVAGYVKNSRAGDAL 217
Query: 120 KLFEVMPEK-----NEVSWTAMLMGYTQC-----GRIQDAWELFKAMPM-KSVVASNSMI 168
++F+ M E N + +++L+G + GR W + +P+ +S+ S++
Sbjct: 218 RVFKTMVEDAIVQPNPSTLSSVLLGCSNLSALGFGRQVHQWCM--KLPLGRSITVGTSLL 275
Query: 169 LGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFP 228
+ G++ A +FD+M KD W+ MI Y + G + I LF M+ EGV ++
Sbjct: 276 SMYCKCGDLDDACKLFDEMHTKDIVAWNAMISGYAQHGGGRKAIKLFEKMKDEGVVPDWI 335
Query: 229 SLISVLSVCASLASLDHGRQ 248
+L++VL+ C D G Q
Sbjct: 336 TLLAVLTACIHTGLCDFGIQ 355
>gi|225440839|ref|XP_002276333.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 705
Score = 483 bits (1243), Expect = e-133, Method: Compositional matrix adjust.
Identities = 261/638 (40%), Positives = 383/638 (60%), Gaps = 48/638 (7%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEK--- 66
A+V YV+ I +A LF +M E+++V+WTVM+GG+ + +++ LF+ M E+
Sbjct: 69 AALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVV 128
Query: 67 -DVVAQTNMVLGYCQDGRVDEGREIFDEMPKK----NVISWTTMISGYVNNNRIDVARKL 121
D VA +V + G + + R I D + +K +VI T MI Y ++ AR++
Sbjct: 129 PDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREI 188
Query: 122 FEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAM------PMKSVVAS----------- 164
F+ M EKN +SW+AM+ Y G+ + A +LF+ M P K +AS
Sbjct: 189 FDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACSDLKNL 248
Query: 165 ----------------------NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVY 202
+++ G+ E++ AR +FD+M E+D TW+ MI Y
Sbjct: 249 QMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMPERDLVTWTVMIGGY 308
Query: 203 ERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDV 262
G E + LF M++EGV + ++++V+ CA L ++ R + + R +F +DV
Sbjct: 309 AECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDV 368
Query: 263 YVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSS 322
+ + +I M+ KCG + + IFD K+++ W+++I+ Y +G G K+L +F M S
Sbjct: 369 ILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRS 428
Query: 323 GVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVED 382
G++P+ +TLV +L ACS+ G V+EG F M Y V +HY C+VDLLGRAG++++
Sbjct: 429 GILPNKITLVSLLYACSHAGLVEEGLRFFSLMWEDYSVRADVKHYTCVVDLLGRAGRLDE 488
Query: 383 AMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYAS 442
A+KLIE+M E D +WG+ LGACRTH + LAE AA LL+L+P+N G YILLSNIYA+
Sbjct: 489 ALKLIESMTVEKDEGLWGAFLGACRTHKDVVLAEKAATSLLELQPQNPGHYILLSNIYAN 548
Query: 443 QGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGG 502
GR+ DVA+ R M +R + K PG +WIEV+ K H F+ D +HP I ML+ +G
Sbjct: 549 AGRWEDVAKTRDLMSQRRLKKIPGWTWIEVDNKSHQFSVGD-TTHPRSKEIYEMLKSLGN 607
Query: 503 LLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGD 562
L GY PD++FVLHDVDEE K+ L HSEKLA+A+GL+ PE PIR++KNLRVCGD
Sbjct: 608 KLELVGYVPDTNFVLHDVDEELKIGILYSHSEKLAIAFGLIATPEHTPIRIIKNLRVCGD 667
Query: 563 CHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
CH+ KL+S + GR II+RDANRFHHFK+G CSC DYW
Sbjct: 668 CHTFCKLVSAITGRVIIVRDANRFHHFKEGACSCGDYW 705
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 109/212 (51%), Gaps = 2/212 (0%)
Query: 198 MIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQ 257
M+ + + G + F + + G R + +L V+ C L +L GR +H + +
Sbjct: 1 MVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFG 60
Query: 258 FDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFH 317
D+D +V + L+ MY+KC E+ + +FD +D+V W +I GYA+ G +SL +F
Sbjct: 61 LDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFE 120
Query: 318 EMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRA 377
+M GV+PD V +V V+ AC+ G + + R I + ++ K + M+D+ +
Sbjct: 121 KMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKF-QLDVILGTAMIDMYAKC 179
Query: 378 GQVEDAMKLIEAMPFEPDAIIWGSLLGACRTH 409
G VE A ++ + M E + I W +++ A H
Sbjct: 180 GCVESAREIFDRME-EKNVISWSAMIAAYGYH 210
>gi|125547694|gb|EAY93516.1| hypothetical protein OsI_15309 [Oryza sativa Indica Group]
Length = 613
Score = 483 bits (1242), Expect = e-133, Method: Compositional matrix adjust.
Identities = 242/594 (40%), Positives = 363/594 (61%), Gaps = 4/594 (0%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIR-DSRIDDARRLFDMMPEKDV 68
TA V V G + A F P K ++ +L G+ R R+ DAR LFD +P DV
Sbjct: 21 TAAVAAAVRHGDLAGAEEAFVSTPRKTTATYNCLLAGYARAPGRLADARHLFDRIPTPDV 80
Query: 69 VAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEK 128
V+ ++L + G D R +F MP ++V SW TM+SG + ++ A+ +F MP +
Sbjct: 81 VSYNTLLLCHFASGDADGARRLFASMPVRDVASWNTMVSGLSKSGAVEEAKVVFLAMPVR 140
Query: 129 NEVSWTAMLMGYTQCGRIQDAWELFKAMPMK-SVVASNSMILGLGQNGEVQKARVVFDQM 187
N VSW AM+ G+ G + A E F+ P K V +M+ G G V KA F+ M
Sbjct: 141 NSVSWNAMVSGFACSGDMSTAEEWFRNAPEKEDAVLWTAMVSGYMDIGNVVKAIKYFEAM 200
Query: 188 REKDDATWSGMIKVYERKGYELEVIDLFTLMQKEG-VRVNFPSLISVLSVCASLASLDHG 246
++ +W+ ++ Y + + + + LF M +E V+ N +L SVL C++L++L G
Sbjct: 201 PVRNLVSWNAVVAGYVKNSHADDALRLFRTMVREANVQPNASTLSSVLLGCSNLSALGFG 260
Query: 247 RQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQY 306
+Q+H ++ ++ V + L++MY KCG+L ++F ++D+V WN++ISGYAQ+
Sbjct: 261 KQIHQWCMKLLLSRNLTVGTSLVSMYCKCGDLSSACILFGEMHTRDVVAWNAMISGYAQH 320
Query: 307 GLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEH 366
G G++++ +F M GV P+ +T V VL+AC +TG G + FE M+ Y +EP+ +H
Sbjct: 321 GDGKEAINLFERMKDEGVEPNWITFVVVLTACIHTGLCDFGIQCFEGMQELYGIEPRVDH 380
Query: 367 YACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLE 426
Y+CMVDLL RAG++E A+ I +MPFEP +G+LL ACR + L+ AE+AA KL++ +
Sbjct: 381 YSCMVDLLCRAGKLERAVDFIRSMPFEPHPSAYGTLLAACRVYKNLEFAELAAGKLIEKD 440
Query: 427 PKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVS 486
P++AG Y+ L+NIYA ++ DV+ +R+ M+ V+K PG SWIE++ +H F D +
Sbjct: 441 PQSAGAYVQLANIYAVANQWDDVSRVRRWMKDNTVVKTPGYSWIEIKGVLHEFRSNDRL- 499
Query: 487 HPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLP 546
HP+ +I L ++ ++E GY PD FVLHDVDE KV L HSEKLA+A+GL+
Sbjct: 500 HPQLYLIHEKLGQLAERMKEMGYVPDLDFVLHDVDETMKVQMLMRHSEKLAIAFGLISTA 559
Query: 547 EGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
G+ +R+ KNLRVCGDCH+A K+IS + REIILRD RFHHF+ G CSC DYW
Sbjct: 560 HGMTLRIFKNLRVCGDCHNAAKVISMIEDREIILRDTTRFHHFRGGHCSCDDYW 613
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 90/292 (30%), Positives = 144/292 (49%), Gaps = 17/292 (5%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MP R+V SW MV G + G + EA +F MP +N VSW M+ GF + A F
Sbjct: 106 MPVRDVASWNTMVSGLSKSGAVEEAKVVFLAMPVRNSVSWNAMVSGFACSGDMSTAEEWF 165
Query: 61 DMMPEK-DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVAR 119
PEK D V T MV GY G V + + F+ MP +N++SW +++GYV N+ D A
Sbjct: 166 RNAPEKEDAVLWTAMVSGYMDIGNVVKAIKYFEAMPVRNLVSWNAVVAGYVKNSHADDAL 225
Query: 120 KLFEVM-----PEKNEVSWTAMLMGYTQC-----GRIQDAWELFKAMPMKSVVASNSMIL 169
+LF M + N + +++L+G + G+ W K + +++ S++
Sbjct: 226 RLFRTMVREANVQPNASTLSSVLLGCSNLSALGFGKQIHQW-CMKLLLSRNLTVGTSLVS 284
Query: 170 GLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPS 229
+ G++ A ++F +M +D W+ MI Y + G E I+LF M+ EGV N+ +
Sbjct: 285 MYCKCGDLSSACILFGEMHTRDVVAWNAMISGYAQHGDGKEAINLFERMKDEGVEPNWIT 344
Query: 230 LISVLSVCASLASLDHGRQVH---AQLVRCQFDVDVYVASVLITMYIKCGEL 278
+ VL+ C D G Q +L + VD Y S ++ + + G+L
Sbjct: 345 FVVVLTACIHTGLCDFGIQCFEGMQELYGIEPRVDHY--SCMVDLLCRAGKL 394
>gi|357516843|ref|XP_003628710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355522732|gb|AET03186.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 748
Score = 482 bits (1241), Expect = e-133, Method: Compositional matrix adjust.
Identities = 246/680 (36%), Positives = 393/680 (57%), Gaps = 81/680 (11%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MP N+ SW ++ Y + G ++E LF MP ++ VSW ++ G+ I + + +
Sbjct: 70 MPHPNLYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAY 129
Query: 61 DMMPEKD-------VVAQTNMVLG----------------------------------YC 79
++M + D + T ++L Y
Sbjct: 130 NLMLKNDGSFNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYS 189
Query: 80 QDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMG 139
+ G + R++FDE+P+KNV+ + T+I G + R++ +++LF M E++ +SWT+M+ G
Sbjct: 190 KMGMISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITG 249
Query: 140 YTQCGRIQDAWELFKAMPMK----------SVVASNSMILGLGQNGEV------------ 177
+TQ G +DA ++F+ M ++ SV+ + ++ L + +V
Sbjct: 250 FTQNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDN 309
Query: 178 -----------------QKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQK 220
+ A VF +M K+ +W+ M+ Y + GY E + F+ MQK
Sbjct: 310 IFVASALVDMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQK 369
Query: 221 EGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVK 280
G+ + +L SV+S CA+LASL+ G Q HA+ + + V++ L+T+Y KCG +
Sbjct: 370 YGIEPDDFTLGSVISSCANLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCGSIED 429
Query: 281 GKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSY 340
+F+ + KD V W +++SGYAQ+G +++ +F M + G+ PD VT +GVLSACS
Sbjct: 430 SHRLFNEISFKDEVTWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGVLSACSR 489
Query: 341 TGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWG 400
G V++G +IFESM +++ + P +HY CM+DL RAG++E+A I MPF PDAI W
Sbjct: 490 AGLVEKGNQIFESMINEHGIVPIQDHYTCMIDLFSRAGRIEEARNFINKMPFSPDAISWA 549
Query: 401 SLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRN 460
+LL +CR + +D+ + AA+ L++L+P N Y+LLS++YA++G++ +VA LRK+MR +
Sbjct: 550 TLLSSCRFYGNMDIGKWAAEFLMELDPHNTASYVLLSSVYAAKGKWEEVARLRKDMRDKG 609
Query: 461 VIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDV 520
+ K PGCSWI+ + +VH+F+ D S+P I LEK+ + + GY PD + VLHDV
Sbjct: 610 LRKEPGCSWIKYKNQVHVFSADD-KSNPFSDQIYSELEKLNYKMIKEGYVPDMNSVLHDV 668
Query: 521 DEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIIL 580
+ EK+ L +HSEKLA+A+GL+ +P G+PIRV+KNLRVC DCH+A K ISK+ REI++
Sbjct: 669 GDSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITNREILV 728
Query: 581 RDANRFHHFKDGLCSCRDYW 600
RD RFH FKDG CSC D+W
Sbjct: 729 RDTARFHLFKDGTCSCGDFW 748
Score = 215 bits (547), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 116/415 (27%), Positives = 224/415 (53%), Gaps = 12/415 (2%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
+P ++ Y + G I A +F QMP N+ SW +L + + R+ + LF
Sbjct: 39 LPYPETFLLNNLISSYAKLGSIPYACKVFDQMPHPNLYSWNTILSAYSKLGRVSEMEYLF 98
Query: 61 DMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKK------NVISWTTMISGYVNNNR 114
D MP +D V+ +++ GY G + + + ++ M K N I+++T++
Sbjct: 99 DAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLMLKNDGSFNLNRITFSTLLILASKRGC 158
Query: 115 IDVARKLFEVMPEKNEVSW----TAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILG 170
+ + R++ + + +S+ + ++ Y++ G I A ++F +P K+VV N++I+G
Sbjct: 159 VKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMISCARKVFDELPEKNVVMYNTLIMG 218
Query: 171 LGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSL 230
L + G V+ ++ +F +MRE+D +W+ MI + + G + + ID+F M+ E ++++ +
Sbjct: 219 LMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQNGLDRDAIDIFREMKLENLQMDQYTF 278
Query: 231 ISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFAS 290
SVL+ C + +L G+QVHA ++R + +++VAS L+ MY KC + + +F
Sbjct: 279 GSVLTACGGVMALQEGKQVHAYIIRTDYKDNIFVASALVDMYCKCKNIKSAEAVFKKMTC 338
Query: 291 KDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREI 350
K++V W +++ GY Q G E+++K F +M G+ PDD TL V+S+C+ ++EG +
Sbjct: 339 KNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFTLGSVISSCANLASLEEGAQF 398
Query: 351 FESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
+ L+ T A +V L G+ G +ED+ +L + F+ D + W +L+
Sbjct: 399 HARALTSGLISFITVSNA-LVTLYGKCGSIEDSHRLFNEISFK-DEVTWTALVSG 451
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 94/396 (23%), Positives = 151/396 (38%), Gaps = 107/396 (27%)
Query: 89 EIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQD 148
I +P +IS Y I A K+F+ MP N SW +L Y++ GR+ +
Sbjct: 34 HIIKTLPYPETFLLNNLISSYAKLGSIPYACKVFDQMPHPNLYSWNTILSAYSKLGRVSE 93
Query: 149 AWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYE 208
LF AMP + V+ NS+I G G + ++ ++ M + D +
Sbjct: 94 MEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLMLKNDGS--------------- 138
Query: 209 LEVIDLFTLMQKEGVRVNFPSLISVLSV--CASLASLDHGRQVHAQLVRCQFDVDVYVAS 266
F L R+ F +L+ + S C L GRQ+H +V+ F V+V S
Sbjct: 139 ------FNLN-----RITFSTLLILASKRGCVKL-----GRQIHGHVVKFGFMSYVFVGS 182
Query: 267 VLITMYIKCGELVKGKLIFDNFASKDIVM------------------------------- 295
L+ MY K G + + +FD K++VM
Sbjct: 183 PLVDMYSKMGMISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSIS 242
Query: 296 WNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGRE------ 349
W S+I+G+ Q GL ++ +F EM + D T VL+AC ++EG++
Sbjct: 243 WTSMITGFTQNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYII 302
Query: 350 -----------------------------IFESMKSKYLVEPKTEHYACMVDLLGRAGQV 380
+F+ M K +V + M+ G+ G
Sbjct: 303 RTDYKDNIFVASALVDMYCKCKNIKSAEAVFKKMTCKNVVS-----WTAMLVGYGQNGYS 357
Query: 381 EDAMKLIEAMP---FEPDAIIWGSLLGACRTHMKLD 413
E+A+K M EPD GS++ +C L+
Sbjct: 358 EEAVKTFSDMQKYGIEPDDFTLGSVISSCANLASLE 393
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 48/269 (17%), Positives = 109/269 (40%), Gaps = 50/269 (18%)
Query: 232 SVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASK 291
++L +C + + +H+ +++ + ++ + LI+ Y K G + +FD
Sbjct: 14 ALLKLCCETHNFTKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYACKVFDQMPHP 73
Query: 292 DIVMWNSII-------------------------------SGYAQYGLGEKSLKVFHEMF 320
++ WN+I+ SGYA GL +S+K ++ M
Sbjct: 74 NLYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLML 133
Query: 321 SS--GVMPDDVTLVGVLSACSYTGKVKEGREI------FESMKSKYLVEPKTEHYACMVD 372
+ + +T +L S G VK GR+I F M ++ P +VD
Sbjct: 134 KNDGSFNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSP-------LVD 186
Query: 373 LLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGP 432
+ + G + A K+ + +P E + +++ +L+ M+ E + + ++ +++
Sbjct: 187 MYSKMGMISCARKVFDELP-EKNVVMYNTLIMGL---MRCGRVEDSKRLFFEMRERDSIS 242
Query: 433 YILLSNIYASQGRFHDVAELRKNMRKRNV 461
+ + + G D ++ + M+ N+
Sbjct: 243 WTSMITGFTQNGLDRDAIDIFREMKLENL 271
>gi|359482718|ref|XP_002263673.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Vitis vinifera]
Length = 1088
Score = 481 bits (1239), Expect = e-133, Method: Compositional matrix adjust.
Identities = 240/651 (36%), Positives = 386/651 (59%), Gaps = 55/651 (8%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVV-----SWTVMLGGFIRDSRIDDAR 57
ERN VS+ A++ GYV+EG EA L+ M ++ + ++T +L + R D+
Sbjct: 440 ERNEVSYNALLAGYVQEGKAEEALELYHDMQSEDGIQPDQFTFTTLLT-LCANQRNDNQG 498
Query: 58 R-----LFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
R L K+++ +T +V Y + GR++ +EIF+ M ++N SW +MI GY N
Sbjct: 499 RQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQN 558
Query: 113 NRIDVARKLFEVMP----EKNEVSWTAMLMG----------------------------- 139
A +LF+ M + + S ++ML
Sbjct: 559 GETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQ 618
Query: 140 ------YTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDA 193
Y +CG + AW+++ K V+ +N M+ +G A+ +FDQM +++ A
Sbjct: 619 VVLVDMYAKCGSMDYAWKVYDQTIKKDVILNNVMVSAFVNSGRANDAKNLFDQMEQRNTA 678
Query: 194 TWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQL 253
W+ ++ Y KG + E + F M + + + ++++++++C+SL +L+HG Q+H+ +
Sbjct: 679 LWNSILAGYANKGLKKESFNHFLEMLESDIEYDVLTMVTIVNLCSSLPALEHGDQLHSLI 738
Query: 254 VRCQF-DVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKS 312
++ F + V + + L+ MY KCG + K + +FDN K+IV WN++ISGY+++G +++
Sbjct: 739 IKKGFVNCSVVLETALVDMYSKCGAITKARTVFDNMNGKNIVSWNAMISGYSKHGCSKEA 798
Query: 313 LKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVD 372
L ++ EM G+ P++VT + +LSACS+TG V+EG IF SM+ Y +E K EHY CMVD
Sbjct: 799 LILYEEMPKKGMYPNEVTFLAILSACSHTGLVEEGLRIFTSMQEDYNIEAKAEHYTCMVD 858
Query: 373 LLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGP 432
LLGRAG++EDA + +E MP EP+ WG+LLGACR H +D+ +AA++L +L+P+N GP
Sbjct: 859 LLGRAGRLEDAKEFVEKMPIEPEVSTWGALLGACRVHKDMDMGRLAAQRLFELDPQNPGP 918
Query: 433 YILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPM 492
Y+++SNIYA+ GR+ +V ++R+ M+ + V K PG SWIE+ ++ +F +HP+
Sbjct: 919 YVIMSNIYAAAGRWKEVEDIRQMMKMKGVKKDPGVSWIEINSEIQIFHA-GSKTHPKTEE 977
Query: 493 IMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRY---HSEKLAVAYGLVKLPEGV 549
I L + + GY PD+SF+L +V + ++ Y HSE+LA++ GL+ LP+
Sbjct: 978 IYNNLRHLTLQSKGLGYIPDTSFILQNVKDIKEEEEEEYLLQHSERLALSLGLISLPKKS 1037
Query: 550 PIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
IRV KNLR+CGDCH+A K ISK+ GR II RD NRFHHF++G CSC DYW
Sbjct: 1038 TIRVFKNLRICGDCHTATKFISKITGRRIIARDTNRFHHFENGKCSCGDYW 1088
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 112/461 (24%), Positives = 211/461 (45%), Gaps = 57/461 (12%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSR----IDDA 56
M ERN V+W +++ + G +A LF +M E S LG + S I
Sbjct: 337 MGERNQVTWNSIISAEAQFGHFNDALVLFLRMQESGYKSNRFNLGSILMASAGLADIGKG 396
Query: 57 RRLFDMMP----EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
R L + D++ + +V Y + G V+E ++F + ++N +S+ +++GYV
Sbjct: 397 RELHGHLVRNLLNSDIILGSALVDMYSKCGMVEEAHQVFRSLLERNEVSYNALLAGYVQE 456
Query: 113 NRIDVARKLFEVMP-----EKNEVSWTAMLMGYTQC--------GRIQDAWELFKAMPMK 159
+ + A +L+ M + ++ ++T +L T C GR Q L +A K
Sbjct: 457 GKAEEALELYHDMQSEDGIQPDQFTFTTLL---TLCANQRNDNQGR-QIHAHLIRANITK 512
Query: 160 SVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQ 219
+++ ++ + G + A+ +F++M E++ +W+ MI+ Y++ G E + LF MQ
Sbjct: 513 NIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQ 572
Query: 220 KEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGEL- 278
G++ + SL S+LS C SL+ GR++H +VR + + + VL+ MY KCG +
Sbjct: 573 LNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQVVLVDMYAKCGSMD 632
Query: 279 ------------------------------VKGKLIFDNFASKDIVMWNSIISGYAQYGL 308
K +FD ++ +WNSI++GYA GL
Sbjct: 633 YAWKVYDQTIKKDVILNNVMVSAFVNSGRANDAKNLFDQMEQRNTALWNSILAGYANKGL 692
Query: 309 GEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYA 368
++S F EM S + D +T+V +++ CS ++ G ++ + K V
Sbjct: 693 KKESFNHFLEMLESDIEYDVLTMVTIVNLCSSLPALEHGDQLHSLIIKKGFVNCSVVLET 752
Query: 369 CMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTH 409
+VD+ + G + A + + M + + + W +++ H
Sbjct: 753 ALVDMYSKCGAITKARTVFDNMNGK-NIVSWNAMISGYSKH 792
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 115/491 (23%), Positives = 234/491 (47%), Gaps = 59/491 (12%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMM- 63
N+ A+V GY G + +A T ++ +VV+W ++ G+++ ++A +FD M
Sbjct: 209 NLFVGGALVDGYARFGWMDDAVTSLDEIEGTSVVTWNAVIAGYVKILSWEEAWGIFDRML 268
Query: 64 -----PEKDVVAQTNMVLGYCQDGRVDEGREIFDEMP----KKNVISWTTMISGYVNNNR 114
P+ A V G + D G+++ ++ K + +I Y +
Sbjct: 269 KIGVCPDNFTFASALRVCGALRSR--DGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDD 326
Query: 115 IDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMP----------MKSVVAS 164
+ K+F+ M E+N+V+W +++ Q G DA LF M + S++ +
Sbjct: 327 EESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQESGYKSNRFNLGSILMA 386
Query: 165 NSMILGLGQN-----------------------------GEVQKARVVFDQMREKDDATW 195
++ + +G+ G V++A VF + E+++ ++
Sbjct: 387 SAGLADIGKGRELHGHLVRNLLNSDIILGSALVDMYSKCGMVEEAHQVFRSLLERNEVSY 446
Query: 196 SGMIKVYERKGYELEVIDLFTLMQKE-GVRVNFPSLISVLSVCASLASLDHGRQVHAQLV 254
+ ++ Y ++G E ++L+ MQ E G++ + + ++L++CA+ + + GRQ+HA L+
Sbjct: 447 NALLAGYVQEGKAEEALELYHDMQSEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLI 506
Query: 255 RCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLK 314
R ++ V + L+ MY +CG L K IF+ A ++ WNS+I GY Q G +++L+
Sbjct: 507 RANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALR 566
Query: 315 VFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLL 374
+F +M +G+ PD +L +LS+C ++GRE+ + + +E + +VD+
Sbjct: 567 LFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGREL-HNFIVRNTMEEEGILQVVLVDMY 625
Query: 375 GRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLL-QLEPKNAGPY 433
+ G ++ A K+ + + D I+ ++ A + + AK L Q+E +N +
Sbjct: 626 AKCGSMDYAWKVYD-QTIKKDVILNNVMVSAFVNSGRAN----DAKNLFDQMEQRNTALW 680
Query: 434 ILLSNIYASQG 444
+ YA++G
Sbjct: 681 NSILAGYANKG 691
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 107/456 (23%), Positives = 205/456 (44%), Gaps = 50/456 (10%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVS----WTVMLGGFIRDSRIDDA 56
MPERN+ +W M+ Y E L+ +M S + ++ I +
Sbjct: 135 MPERNLTAWNTMILAYARVDDYMEVLRLYGRMRGSGNFSDKFTFPSVIKACIAMEDMGGV 194
Query: 57 RRLFDMMPEK----DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
R+L + + ++ +V GY + G +D+ DE+ +V++W +I+GYV
Sbjct: 195 RQLQSSVVKAGLNCNLFVGGALVDGYARFGWMDDAVTSLDEIEGTSVVTWNAVIAGYVKI 254
Query: 113 NRIDVARKLFEVM------PEKNEVSWTAMLMGY--TQCGRIQDAWELFKAMPMKSVVAS 164
+ A +F+ M P+ + + G ++ G Q +L
Sbjct: 255 LSWEEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQVHSKLIACGFKGDTFVG 314
Query: 165 NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVR 224
N++I + + + VFD+M E++ TW+ +I + G+ + + LF MQ+ G +
Sbjct: 315 NALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQESGYK 374
Query: 225 VNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLI 284
N +L S+L A LA + GR++H LVR + D+ + S L+ MY KCG + + +
Sbjct: 375 SNRFNLGSILMASAGLADIGKGRELHGHLVRNLLNSDIILGSALVDMYSKCGMVEEAHQV 434
Query: 285 FDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFS-SGVMPDDVTLVGVLSACSYTGK 343
F + ++ V +N++++GY Q G E++L+++H+M S G+ PD T +L+ C+
Sbjct: 435 FRSLLERNEVSYNALLAGYVQEGKAEEALELYHDMQSEDGIQPDQFTFTTLLTLCANQRN 494
Query: 344 VKEGREIF-----ESMKSKYLVEPKTEH-------------------------YACMVDL 373
+GR+I ++ +VE + H + M++
Sbjct: 495 DNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEG 554
Query: 374 LGRAGQVEDAMKLIEAMPF---EPDAIIWGSLLGAC 406
+ G+ ++A++L + M +PD S+L +C
Sbjct: 555 YQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSC 590
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 145/327 (44%), Gaps = 41/327 (12%)
Query: 118 ARKLFEVMPEKNEVSWTAMLMGYTQC----------GRIQDAWELFKAMPMKSVVAS--- 164
ARKLFE MPE+N +W M++ Y + GR++ + SV+ +
Sbjct: 128 ARKLFEEMPERNLTAWNTMILAYARVDDYMEVLRLYGRMRGSGNFSDKFTFPSVIKACIA 187
Query: 165 --------------------------NSMILGLGQNGEVQKARVVFDQMREKDDATWSGM 198
+++ G + G + A D++ TW+ +
Sbjct: 188 MEDMGGVRQLQSSVVKAGLNCNLFVGGALVDGYARFGWMDDAVTSLDEIEGTSVVTWNAV 247
Query: 199 IKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQF 258
I Y + E +F M K GV + + S L VC +L S D G+QVH++L+ C F
Sbjct: 248 IAGYVKILSWEEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQVHSKLIACGF 307
Query: 259 DVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHE 318
D +V + LI MY KC + +FD ++ V WNSIIS AQ+G +L +F
Sbjct: 308 KGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLR 367
Query: 319 MFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAG 378
M SG + L +L A + + +GRE+ + + L+ + +VD+ + G
Sbjct: 368 MQESGYKSNRFNLGSILMASAGLADIGKGRELHGHL-VRNLLNSDIILGSALVDMYSKCG 426
Query: 379 QVEDAMKLIEAMPFEPDAIIWGSLLGA 405
VE+A ++ ++ E + + + +LL
Sbjct: 427 MVEEAHQVFRSL-LERNEVSYNALLAG 452
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 109/218 (50%), Gaps = 19/218 (8%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEK----NVVSWTVMLGGFIRDSRIDDA 56
M +RN W +++ GY +G+ E+ F +M E +V++ ++ ++
Sbjct: 672 MEQRNTALWNSILAGYANKGLKKESFNHFLEMLESDIEYDVLTMVTIVNLCSSLPALEHG 731
Query: 57 RRLFDMMPEK-----DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVN 111
+L ++ +K VV +T +V Y + G + + R +FD M KN++SW MISGY
Sbjct: 732 DQLHSLIIKKGFVNCSVVLETALVDMYSKCGAITKARTVFDNMNGKNIVSWNAMISGYSK 791
Query: 112 NNRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNS- 166
+ A L+E MP+K NEV++ A+L + G +++ +F +M + + +
Sbjct: 792 HGCSKEALILYEEMPKKGMYPNEVTFLAILSACSHTGLVEEGLRIFTSMQEDYNIEAKAE 851
Query: 167 ----MILGLGQNGEVQKARVVFDQMR-EKDDATWSGMI 199
M+ LG+ G ++ A+ ++M E + +TW ++
Sbjct: 852 HYTCMVDLLGRAGRLEDAKEFVEKMPIEPEVSTWGALL 889
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 89/175 (50%), Gaps = 15/175 (8%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEK----NVVSWTVMLGGFIRDSRIDDA 56
M +N+VSW AM+ GY + G EA L+ +MP+K N V++ +L +++
Sbjct: 774 MNGKNIVSWNAMISGYSKHGCSKEALILYEEMPKKGMYPNEVTFLAILSACSHTGLVEEG 833
Query: 57 RRLFDMMPEK-DVVAQ----TNMVLGYCQDGRVDEGREIFDEMP-KKNVISWTTMISGYV 110
R+F M E ++ A+ T MV + GR+++ +E ++MP + V +W ++
Sbjct: 834 LRIFTSMQEDYNIEAKAEHYTCMVDLLGRAGRLEDAKEFVEKMPIEPEVSTWGALLGACR 893
Query: 111 NNNRIDVAR----KLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSV 161
+ +D+ R +LFE+ P+ N + M Y GR ++ ++ + M MK V
Sbjct: 894 VHKDMDMGRLAAQRLFELDPQ-NPGPYVIMSNIYAAAGRWKEVEDIRQMMKMKGV 947
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 60/126 (47%), Gaps = 3/126 (2%)
Query: 216 TLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKC 275
++ K VN S++ C S G+ +H Q++ ++ D Y+ + ++ +Y +
Sbjct: 60 SIHTKPASDVNPLPYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARS 119
Query: 276 G---ELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLV 332
G +L + +F+ +++ WN++I YA+ + L+++ M SG D T
Sbjct: 120 GCLDDLCYARKLFEEMPERNLTAWNTMILAYARVDDYMEVLRLYGRMRGSGNFSDKFTFP 179
Query: 333 GVLSAC 338
V+ AC
Sbjct: 180 SVIKAC 185
>gi|328774757|gb|AEB39778.1| pentatricopeptide repeat protein 77 [Funaria hygrometrica]
Length = 1161
Score = 481 bits (1238), Expect = e-133, Method: Compositional matrix adjust.
Identities = 246/614 (40%), Positives = 372/614 (60%), Gaps = 19/614 (3%)
Query: 4 RNVVSWTAMVRGYVEEGMITEAGTLFWQMP----EKNVVSWTVMLGGFIRDSRIDDARRL 59
R+++SW +M+ G+ + G A LF +M E + +++ +L G ++ R++
Sbjct: 550 RDIISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDKITFASVLVGCKNPEALELGRQI 609
Query: 60 FDMMPEK----DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRI 115
++ E DV ++ Y + G + + E+F + +NV+SWT MI G+ +
Sbjct: 610 HMLIIESGLQLDVNLGNALINMYIRCGSLQDAYEVFHSLRHRNVMSWTAMIGGFADQGED 669
Query: 116 DVARKLFEVM------PEKNEVSWTAMLMGYTQC---GRIQDAWELFKAMPMKSVVASNS 166
A +LF M P K+ S + C G+ A L + + V N+
Sbjct: 670 RKAFELFWQMQNDGFKPVKSTFSSILKACMSSACLDEGKKVIAHILNSGYELDTGVG-NA 728
Query: 167 MILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVN 226
+I ++G + AR VFD+M +D +W+ MI Y + G + MQ++GV +N
Sbjct: 729 LISAYSKSGSMTDARKVFDKMPNRDIMSWNKMIAGYAQNGLGGTALQFAYQMQEQGVVLN 788
Query: 227 FPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFD 286
S +S+L+ C+S ++L+ G++VHA++V+ + DV V + LI+MY KCG L + + +FD
Sbjct: 789 KFSFVSILNACSSFSALEEGKRVHAEIVKRKMQGDVRVGAALISMYAKCGSLEEAQEVFD 848
Query: 287 NFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKE 346
NF K++V WN++I+ YAQ+GL K+L F+ M G+ PD T +LSAC+++G V E
Sbjct: 849 NFTEKNVVTWNAMINAYAQHGLASKALDFFNCMDKEGIKPDGSTFTSILSACNHSGLVME 908
Query: 347 GREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGAC 406
G IF S++S++ + P EHY C+V LLGRAG+ ++A LI MPF PDA +W +LLGAC
Sbjct: 909 GNRIFSSLESQHGLSPTIEHYGCLVGLLGRAGRFQEAETLINQMPFPPDAAVWETLLGAC 968
Query: 407 RTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPG 466
R H + LAE AA L+L +N Y+LLSN+YA+ GR+ DVA++R+ M R + K PG
Sbjct: 969 RIHGNVALAEHAANNALKLNARNPAVYVLLSNVYAAAGRWDDVAKIRRVMEGRGIRKEPG 1028
Query: 467 CSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKV 526
SWIEV+ +H F D SHPE I L+++ + AGY PD+ +VLH++D+E +
Sbjct: 1029 RSWIEVDNIIHEFIAAD-RSHPETAEIYEELKRLSLEMERAGYSPDTQYVLHNLDKEHQE 1087
Query: 527 HSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRF 586
SL HSE+LA+AYGL+K P G PIR+ KNLR+CGDCH+A K ISK++GREII RD+NRF
Sbjct: 1088 TSLCTHSERLAIAYGLLKTPPGTPIRIFKNLRICGDCHTASKFISKLVGREIIARDSNRF 1147
Query: 587 HHFKDGLCSCRDYW 600
H FK+G CSC D+W
Sbjct: 1148 HTFKNGKCSCEDFW 1161
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 118/524 (22%), Positives = 244/524 (46%), Gaps = 74/524 (14%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM------PEKNVVSWTVMLGGFIRDSRID 54
MP R+V+SW +++ Y ++G +A LF +M P K +++ +L + ++
Sbjct: 143 MPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQTAGFIPSK--ITYISILTACCSPAELE 200
Query: 55 DARRLFDMMPE----KDVVAQTNMV--LGYCQDGRVDEGREIFDEMPKKNVISWTTMISG 108
+++ + E +D Q +++ G C+D + R++F + +++V+S+ TM+
Sbjct: 201 YGKKIHSKIIEAGYQRDPRVQNSLLNMYGKCED--LPSARQVFSGIYRRDVVSYNTMLGL 258
Query: 109 YVNNNRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVAS 164
Y ++ LF M + ++V++ +L +T + + + K + + +
Sbjct: 259 YAQKAYVEECIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDEGKRIHKLAVNEGLNSD 318
Query: 165 NSMILGLG----QNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQK 220
+ L + G+V A+ + ++D ++ +I + G+ E + + M+
Sbjct: 319 IRVGTALATMFVRCGDVAGAKQALEAFADRDVVVYNALIAALAQHGHYEEAFEQYYQMRS 378
Query: 221 EGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVK 280
+GV +N + +SVL+ C++ +L G +H+ + DV + + LI+MY +CG+L +
Sbjct: 379 DGVVMNRTTYLSVLNACSTSKALGAGELIHSHISEVGHSSDVQIGNSLISMYARCGDLPR 438
Query: 281 GKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSY 340
+ +F+ +D++ WN+II+GYA+ +++K++ +M S GV P VT + +LSAC+
Sbjct: 439 ARELFNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQMQSEGVKPGRVTFLHLLSACTN 498
Query: 341 T-----------------------------------GKVKEGREIFESMKSKYLVEPKTE 365
+ G + E + +FE +++ ++
Sbjct: 499 SSAYSDGKMIHEDILRSGIKSNGHLANALMNMYRRCGSIMEAQNVFEGTRARDIIS---- 554
Query: 366 HYACMVDLLGRAGQVEDAMKLIEAMP---FEPDAIIWGSLLGACRTHMKLDLAE----VA 418
+ M+ + G E A KL M EPD I + S+L C+ L+L +
Sbjct: 555 -WNSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDKITFASVLVGCKNPEALELGRQIHMLI 613
Query: 419 AKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVI 462
+ LQL+ N G ++ N+Y G D E+ ++R RNV+
Sbjct: 614 IESGLQLDV-NLGNALI--NMYIRCGSLQDAYEVFHSLRHRNVM 654
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 105/421 (24%), Positives = 198/421 (47%), Gaps = 22/421 (5%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVV----SWTVMLGGFIRDSRIDDARR 58
+R+VV + A++ + G EA ++QM VV ++ +L +
Sbjct: 347 DRDVVVYNALIAALAQHGHYEEAFEQYYQMRSDGVVMNRTTYLSVLNACSTSKALGAGEL 406
Query: 59 LFDMMPE----KDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNR 114
+ + E DV +++ Y + G + RE+F+ MPK+++ISW +I+GY
Sbjct: 407 IHSHISEVGHSSDVQIGNSLISMYARCGDLPRARELFNTMPKRDLISWNAIIAGYARRED 466
Query: 115 IDVARKLFEVMPEKN----EVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILG 170
A KL++ M + V++ +L T D + + + ++S + SN +
Sbjct: 467 RGEAMKLYKQMQSEGVKPGRVTFLHLLSACTNSSAYSDGKMIHEDI-LRSGIKSNGHLAN 525
Query: 171 LGQN-----GEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRV 225
N G + +A+ VF+ R +D +W+ MI + + G LF M+KEG+
Sbjct: 526 ALMNMYRRCGSIMEAQNVFEGTRARDIISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLEP 585
Query: 226 NFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIF 285
+ + SVL C + +L+ GRQ+H ++ +DV + + LI MYI+CG L +F
Sbjct: 586 DKITFASVLVGCKNPEALELGRQIHMLIIESGLQLDVNLGNALINMYIRCGSLQDAYEVF 645
Query: 286 DNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVK 345
+ ++++ W ++I G+A G K+ ++F +M + G P T +L AC + +
Sbjct: 646 HSLRHRNVMSWTAMIGGFADQGEDRKAFELFWQMQNDGFKPVKSTFSSILKACMSSACLD 705
Query: 346 EGREIFES-MKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLG 404
EG+++ + S Y E T ++ ++G + DA K+ + MP D + W ++
Sbjct: 706 EGKKVIAHILNSGY--ELDTGVGNALISAYSKSGSMTDARKVFDKMP-NRDIMSWNKMIA 762
Query: 405 A 405
Sbjct: 763 G 763
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 95/424 (22%), Positives = 206/424 (48%), Gaps = 30/424 (7%)
Query: 4 RNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV----VSWTVMLGGFIRDSRIDDARRL 59
R+VVS+ M+ Y ++ + E LF QM + + V++ +L F S +D+ +R+
Sbjct: 247 RDVVSYNTMLGLYAQKAYVEECIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDEGKRI 306
Query: 60 FDMMPEK----DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRI 115
+ + D+ T + + + G V ++ + ++V+ + +I+ +
Sbjct: 307 HKLAVNEGLNSDIRVGTALATMFVRCGDVAGAKQALEAFADRDVVVYNALIAALAQHGHY 366
Query: 116 DVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVAS----------- 164
+ E + ++ ++M T + +A KA+ ++ S
Sbjct: 367 E------EAFEQYYQMRSDGVVMNRTTYLSVLNACSTSKALGAGELIHSHISEVGHSSDV 420
Query: 165 ---NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKE 221
NS+I + G++ +AR +F+ M ++D +W+ +I Y R+ E + L+ MQ E
Sbjct: 421 QIGNSLISMYARCGDLPRARELFNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQMQSE 480
Query: 222 GVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKG 281
GV+ + + +LS C + ++ G+ +H ++R + ++A+ L+ MY +CG +++
Sbjct: 481 GVKPGRVTFLHLLSACTNSSAYSDGKMIHEDILRSGIKSNGHLANALMNMYRRCGSIMEA 540
Query: 282 KLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYT 341
+ +F+ ++DI+ WNS+I+G+AQ+G E + K+F EM G+ PD +T VL C
Sbjct: 541 QNVFEGTRARDIISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDKITFASVLVGCKNP 600
Query: 342 GKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGS 401
++ GR+I + L + ++++ R G ++DA ++ ++ + + W +
Sbjct: 601 EALELGRQIHMLIIESGL-QLDVNLGNALINMYIRCGSLQDAYEVFHSLRHR-NVMSWTA 658
Query: 402 LLGA 405
++G
Sbjct: 659 MIGG 662
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 96/384 (25%), Positives = 195/384 (50%), Gaps = 14/384 (3%)
Query: 34 EKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDV---VAQTNMVLG-YCQDGRVDEGRE 89
E N ++ ++ R + +A+R+ M E V + +N+++ Y + V + +
Sbjct: 79 ETNRAAYVDLVQNCTRKRSLAEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVSDAHQ 138
Query: 90 IFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGR 145
+F +MP+++VISW ++IS Y A +LFE M +++++ ++L
Sbjct: 139 VFLKMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQTAGFIPSKITYISILTACCSPAE 198
Query: 146 IQDA----WELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKV 201
++ ++ +A + NS++ G+ ++ AR VF + +D +++ M+ +
Sbjct: 199 LEYGKKIHSKIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQVFSGIYRRDVVSYNTMLGL 258
Query: 202 YERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVD 261
Y +K Y E I LF M EG+ + + I++L + + LD G+++H V + D
Sbjct: 259 YAQKAYVEECIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDEGKRIHKLAVNEGLNSD 318
Query: 262 VYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFS 321
+ V + L TM+++CG++ K + FA +D+V++N++I+ AQ+G E++ + +++M S
Sbjct: 319 IRVGTALATMFVRCGDVAGAKQALEAFADRDVVVYNALIAALAQHGHYEEAFEQYYQMRS 378
Query: 322 SGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVE 381
GV+ + T + VL+ACS T K E+ S S+ + ++ + R G +
Sbjct: 379 DGVVMNRTTYLSVLNACS-TSKALGAGELIHSHISEVGHSSDVQIGNSLISMYARCGDLP 437
Query: 382 DAMKLIEAMPFEPDAIIWGSLLGA 405
A +L MP + D I W +++
Sbjct: 438 RARELFNTMP-KRDLISWNAIIAG 460
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 122/233 (52%), Gaps = 2/233 (0%)
Query: 177 VQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSV 236
V A VF +M +D +W+ +I Y ++G++ + LF MQ G + + IS+L+
Sbjct: 133 VSDAHQVFLKMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQTAGFIPSKITYISILTA 192
Query: 237 CASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMW 296
C S A L++G+++H++++ + D V + L+ MY KC +L + +F +D+V +
Sbjct: 193 CCSPAELEYGKKIHSKIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQVFSGIYRRDVVSY 252
Query: 297 NSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKS 356
N+++ YAQ E+ + +F +M S G+ PD VT + +L A + + EG+ I + +
Sbjct: 253 NTMLGLYAQKAYVEECIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDEGKRIHKLAVN 312
Query: 357 KYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTH 409
+ L + + R G V A + +EA + D +++ +L+ A H
Sbjct: 313 EGL-NSDIRVGTALATMFVRCGDVAGAKQALEAFA-DRDVVVYNALIAALAQH 363
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 111/203 (54%), Gaps = 6/203 (2%)
Query: 203 ERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDV 262
+ +G E E DL Q N + + ++ C SL +++HAQ+V D+
Sbjct: 60 QHRGSERE--DLSNAYQPRPTETNRAAYVDLVQNCTRKRSLAEAKRIHAQMVEAGVGPDI 117
Query: 263 YVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSS 322
+++++LI MY+KC + +F +D++ WNS+IS YAQ G +K+ ++F EM ++
Sbjct: 118 FLSNLLINMYVKCRSVSDAHQVFLKMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQTA 177
Query: 323 GVMPDDVTLVGVLSACSYTGKVKEGREIFES-MKSKYLVEPKTEHYACMVDLLGRAGQVE 381
G +P +T + +L+AC +++ G++I +++ Y +P+ ++ ++++ G+ +
Sbjct: 178 GFIPSKITYISILTACCSPAELEYGKKIHSKIIEAGYQRDPRVQN--SLLNMYGKCEDLP 235
Query: 382 DAMKLIEAMPFEPDAIIWGSLLG 404
A ++ + + D + + ++LG
Sbjct: 236 SARQVFSGI-YRRDVVSYNTMLG 257
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 104/217 (47%), Gaps = 18/217 (8%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVV----SWTVMLGGFIRDSRIDDA 56
MP R+++SW M+ GY + G+ A +QM E+ VV S+ +L S +++
Sbjct: 749 MPNRDIMSWNKMIAGYAQNGLGGTALQFAYQMQEQGVVLNKFSFVSILNACSSFSALEEG 808
Query: 57 RRLFDMMPEK----DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+R+ + ++ DV ++ Y + G ++E +E+FD +KNV++W MI+ Y +
Sbjct: 809 KRVHAEIVKRKMQGDVRVGAALISMYAKCGSLEEAQEVFDNFTEKNVVTWNAMINAYAQH 868
Query: 113 NRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAMP----MKSVVAS 164
A F M ++ + ++T++L G + + +F ++ + +
Sbjct: 869 GLASKALDFFNCMDKEGIKPDGSTFTSILSACNHSGLVMEGNRIFSSLESQHGLSPTIEH 928
Query: 165 NSMILG-LGQNGEVQKARVVFDQMR-EKDDATWSGMI 199
++G LG+ G Q+A + +QM D A W ++
Sbjct: 929 YGCLVGLLGRAGRFQEAETLINQMPFPPDAAVWETLL 965
>gi|225458036|ref|XP_002280360.1| PREDICTED: pentatricopeptide repeat-containing protein At1g25360
[Vitis vinifera]
Length = 799
Score = 480 bits (1236), Expect = e-133, Method: Compositional matrix adjust.
Identities = 242/588 (41%), Positives = 357/588 (60%), Gaps = 44/588 (7%)
Query: 56 ARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNN-- 113
AR+LFD M E+D ++ T M+ GY ++G +D R+ D M +K V++W MISGYV++
Sbjct: 213 ARKLFDEMTERDELSWTTMIAGYVRNGELDAARQFLDGMTEKLVVAWNAMISGYVHHGFF 272
Query: 114 --RIDVARKLFEVMPEKNEVSWTAMLMG-------------------------------- 139
+++ RK++ + + +E ++T++L
Sbjct: 273 LEALEMFRKMYLLGIQWDEFTYTSVLSACANAGFFLHGKQVHAYILRTEPRPSLDFSLSV 332
Query: 140 -------YTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDD 192
Y +CG++ +A ++F MP+K +V+ N+++ G G + +A+ F++M E++
Sbjct: 333 NNALATLYWKCGKVDEARQVFNQMPVKDLVSWNAILSGYVNAGRIDEAKSFFEEMPERNL 392
Query: 193 ATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQ 252
TW+ MI + G+ E + LF M+ EG + + CA LA+L HGRQ+HAQ
Sbjct: 393 LTWTVMISGLAQNGFGEESLKLFNRMKSEGFEPCDYAFAGAIIACAWLAALMHGRQLHAQ 452
Query: 253 LVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKS 312
LVR FD + + LITMY KCG + +F D V WN++I+ Q+G G ++
Sbjct: 453 LVRLGFDSSLSAGNALITMYAKCGVVEAAHCLFLTMPYLDSVSWNAMIAALGQHGHGAQA 512
Query: 313 LKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVD 372
L++F M ++PD +T + VLS CS+ G V+EG F+SM Y + P +HYA M+D
Sbjct: 513 LELFELMLKEDILPDRITFLTVLSTCSHAGLVEEGHRYFKSMSGLYGICPGEDHYARMID 572
Query: 373 LLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGP 432
LL RAG+ +A +IE MP EP IW +LL CR H +DL AA++L +L P++ G
Sbjct: 573 LLCRAGKFSEAKDMIETMPVEPGPPIWEALLAGCRIHGNMDLGIQAAERLFELMPQHDGT 632
Query: 433 YILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPM 492
Y+LLSN+YA+ GR+ DVA++RK MR + V K PGCSWIEVE KVH+F D V HPE
Sbjct: 633 YVLLSNMYATVGRWDDVAKVRKLMRDKGVKKEPGCSWIEVENKVHVFLVDDIV-HPEVQA 691
Query: 493 IMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIR 552
+ LE++G +R+ GY PD+ FVLHD++ E+K + L HSEKLAV +GL+KLP G +R
Sbjct: 692 VYNYLEELGLKMRKLGYIPDTKFVLHDMESEQKEYVLSTHSEKLAVGFGLLKLPLGATVR 751
Query: 553 VMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
V KNLR+CGDCH+A K +SKV+ REI++RD RFHHFK+G CSC +YW
Sbjct: 752 VFKNLRICGDCHNAFKFMSKVVEREIVVRDGKRFHHFKNGECSCGNYW 799
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 116/449 (25%), Positives = 196/449 (43%), Gaps = 88/449 (19%)
Query: 47 FIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPK--KNVISWTT 104
+ + S + A LFD + + D+VA+T ++ + G + REIF P ++ + +
Sbjct: 60 YCKSSDLVSAHHLFDEIRQPDIVARTTLIAAHSSAGNSNLAREIFFATPLGIRDTVCYNA 119
Query: 105 MISGYVNNN----RIDVARKLFEVMPEKNEVSWTAMLMGYT-------QCGRIQ------ 147
MI+GY +NN I++ R L + ++T++L QC +I
Sbjct: 120 MITGYSHNNDGFGAIELFRDLLRNGFRPDNFTFTSVLGALALIVEDEKQCQQIHCAVVKS 179
Query: 148 --------------------------------DAWELFKAMPMKSVVASNSMILGLGQNG 175
A +LF M + ++ +MI G +NG
Sbjct: 180 GSGFVTSVLNALLSVFVKCASSPLVSSSSLMAAARKLFDEMTERDELSWTTMIAGYVRNG 239
Query: 176 EVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLS 235
E+ AR D M EK W+ MI Y G+ LE +++F M G++ + + SVLS
Sbjct: 240 ELDAARQFLDGMTEKLVVAWNAMISGYVHHGFFLEALEMFRKMYLLGIQWDEFTYTSVLS 299
Query: 236 VCASLASLDHGRQVHAQLVRCQ----FDVDVYVASVLITMYIKCGELVKGKLIFDNFASK 291
CA+ HG+QVHA ++R + D + V + L T+Y KCG++ + + +F+ K
Sbjct: 300 ACANAGFFLHGKQVHAYILRTEPRPSLDFSLSVNNALATLYWKCGKVDEARQVFNQMPVK 359
Query: 292 DIVMWNSIISGY-------------------------------AQYGLGEKSLKVFHEMF 320
D+V WN+I+SGY AQ G GE+SLK+F+ M
Sbjct: 360 DLVSWNAILSGYVNAGRIDEAKSFFEEMPERNLLTWTVMISGLAQNGFGEESLKLFNRMK 419
Query: 321 SSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQV 380
S G P D G + AC++ + GR++ + + + ++ + + G V
Sbjct: 420 SEGFEPCDYAFAGAIIACAWLAALMHGRQLHAQL-VRLGFDSSLSAGNALITMYAKCGVV 478
Query: 381 EDAMKLIEAMPFEPDAIIWGSLLGACRTH 409
E A L MP+ D++ W +++ A H
Sbjct: 479 EAAHCLFLTMPY-LDSVSWNAMIAALGQH 506
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 141/330 (42%), Gaps = 82/330 (24%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
M ER+ +SWT M+ GYV G + A M EK VV+W M+ G++ +A +F
Sbjct: 220 MTERDELSWTTMIAGYVRNGELDAARQFLDGMTEKLVVAWNAMISGYVHHGFFLEALEMF 279
Query: 61 DMM-----------------------------------------PEKDVVAQTNMVLG-- 77
M P D N L
Sbjct: 280 RKMYLLGIQWDEFTYTSVLSACANAGFFLHGKQVHAYILRTEPRPSLDFSLSVNNALATL 339
Query: 78 YCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAML 137
Y + G+VDE R++F++MP K+++SW ++SGYVN RID A+ FE MPE+N ++WT M+
Sbjct: 340 YWKCGKVDEARQVFNQMPVKDLVSWNAILSGYVNAGRIDEAKSFFEEMPERNLLTWTVMI 399
Query: 138 MGYTQCGRIQDAWELFKAMPMK-------------------------------------- 159
G Q G +++ +LF M +
Sbjct: 400 SGLAQNGFGEESLKLFNRMKSEGFEPCDYAFAGAIIACAWLAALMHGRQLHAQLVRLGFD 459
Query: 160 -SVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLM 218
S+ A N++I + G V+ A +F M D +W+ MI + G+ + ++LF LM
Sbjct: 460 SSLSAGNALITMYAKCGVVEAAHCLFLTMPYLDSVSWNAMIAALGQHGHGAQALELFELM 519
Query: 219 QKEGVRVNFPSLISVLSVCASLASLDHGRQ 248
KE + + + ++VLS C+ ++ G +
Sbjct: 520 LKEDILPDRITFLTVLSTCSHAGLVEEGHR 549
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 131/294 (44%), Gaps = 23/294 (7%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MP +++VSW A++ GYV G I EA + F +MPE+N+++WTVM+ G ++ +++ +LF
Sbjct: 356 MPVKDLVSWNAILSGYVNAGRIDEAKSFFEEMPERNLLTWTVMISGLAQNGFGEESLKLF 415
Query: 61 DMMPEKDV----VAQTNMVLGYCQDGRVDEGREIFDEMPK----KNVISWTTMISGYVNN 112
+ M + A ++ + GR++ ++ + ++ + +I+ Y
Sbjct: 416 NRMKSEGFEPCDYAFAGAIIACAWLAALMHGRQLHAQLVRLGFDSSLSAGNALITMYAKC 475
Query: 113 NRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGL- 171
++ A LF MP + VSW AM+ Q G A ELF+ M + ++ L +
Sbjct: 476 GVVEAAHCLFLTMPYLDSVSWNAMIAALGQHGHGAQALELFELMLKEDILPDRITFLTVL 535
Query: 172 ---GQNGEVQKARVVFDQMRE-----KDDATWSGMIKVYERKGYELEVIDLFTLMQKEGV 223
G V++ F M + ++ MI + R G E D+ M V
Sbjct: 536 STCSHAGLVEEGHRYFKSMSGLYGICPGEDHYARMIDLLCRAGKFSEAKDMIETMP---V 592
Query: 224 RVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVD-VYVASVLITMYIKCG 276
P ++L+ C ++D G Q +L D YV +L MY G
Sbjct: 593 EPGPPIWEALLAGCRIHGNMDLGIQAAERLFELMPQHDGTYV--LLSNMYATVG 644
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 84/338 (24%), Positives = 152/338 (44%), Gaps = 35/338 (10%)
Query: 108 GYVNNNRIDV---------ARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPM 158
GY+ N IDV A LF+ + + + V+ T ++ ++ G A E+F A P+
Sbjct: 50 GYILNRLIDVYCKSSDLVSAHHLFDEIRQPDIVARTTLIAAHSSAGNSNLAREIFFATPL 109
Query: 159 --KSVVASNSMILGLGQN----GEVQKARVVFDQMREKDDATWS---GMIKVYERKGYEL 209
+ V N+MI G N G ++ R + D+ T++ G + + +
Sbjct: 110 GIRDTVCYNAMITGYSHNNDGFGAIELFRDLLRNGFRPDNFTFTSVLGALALIVEDEKQC 169
Query: 210 EVIDLFTLMQKEG-VRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFD----VDVYV 264
+ I + G V +L+SV CAS + + A R FD D
Sbjct: 170 QQIHCAVVKSGSGFVTSVLNALLSVFVKCASSPLVSSSSLMAA--ARKLFDEMTERDELS 227
Query: 265 ASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGV 324
+ +I Y++ GEL + D K +V WN++ISGY +G ++L++F +M+ G+
Sbjct: 228 WTTMIAGYVRNGELDAARQFLDGMTEKLVVAWNAMISGYVHHGFFLEALEMFRKMYLLGI 287
Query: 325 MPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTE-HYACMVD-----LLGRAG 378
D+ T VLSAC+ G G+++ + EP+ ++ V+ L + G
Sbjct: 288 QWDEFTYTSVLSACANAGFFLHGKQVHAYILR---TEPRPSLDFSLSVNNALATLYWKCG 344
Query: 379 QVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAE 416
+V++A ++ MP + D + W ++L ++D A+
Sbjct: 345 KVDEARQVFNQMPVK-DLVSWNAILSGYVNAGRIDEAK 381
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 53/125 (42%), Gaps = 33/125 (26%)
Query: 246 GRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDN------------------ 287
R VHA ++ F Y+ + LI +Y K +LV +FD
Sbjct: 34 ARTVHAHMIASGFKPRGYILNRLIDVYCKSSDLVSAHHLFDEIRQPDIVARTTLIAAHSS 93
Query: 288 -----------FAS----KDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLV 332
FA+ +D V +N++I+GY+ G ++++F ++ +G PD+ T
Sbjct: 94 AGNSNLAREIFFATPLGIRDTVCYNAMITGYSHNNDGFGAIELFRDLLRNGFRPDNFTFT 153
Query: 333 GVLSA 337
VL A
Sbjct: 154 SVLGA 158
>gi|224132926|ref|XP_002321443.1| predicted protein [Populus trichocarpa]
gi|222868439|gb|EEF05570.1| predicted protein [Populus trichocarpa]
Length = 723
Score = 479 bits (1234), Expect = e-132, Method: Compositional matrix adjust.
Identities = 248/625 (39%), Positives = 381/625 (60%), Gaps = 31/625 (4%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIR---DSRIDDAR 57
MP+RNVV+WT M+ + + G +A LF M V L G + + +
Sbjct: 105 MPDRNVVTWTLMITRFQQLGFSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLG 164
Query: 58 RLFDMMPEK-----DVVAQTNMVLGYCQ---DGRVDEGREIFDEMPKKNVISWTTMISGY 109
R F + K DV ++V Y + DG VD+ R++FD MP NV+SWT +I+GY
Sbjct: 165 RQFHCLVMKSGLDLDVCVGCSLVDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAIITGY 224
Query: 110 VNNNRIDVARKLFEVMPE-------KNEVSWTAMLMGYTQCGRIQDAW--ELFKAMPMKS 160
V + D R+ E+ E N +++++L C + D W E A+ +K
Sbjct: 225 VQSGGCD--REAIELFLEMVQGQVKPNHFTFSSVL---KACANLSDIWLGEQVYALVVKM 279
Query: 161 VVAS-----NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLF 215
+AS NS+I + G ++ AR FD + EK+ +++ ++ Y + E +LF
Sbjct: 280 RLASINCVGNSLISMYSRCGNMENARKAFDVLFEKNLVSYNTIVNAYAKSLNSEEAFELF 339
Query: 216 TLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKC 275
++ G VN + S+LS +S+ ++ G Q+H+++++ F ++++ + LI+MY +C
Sbjct: 340 NEIEGAGTGVNAFTFASLLSGASSIGAIGKGEQIHSRILKSGFKSNLHICNALISMYSRC 399
Query: 276 GELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVL 335
G + +F+ +++ W S+I+G+A++G ++L+ FH+M +GV P++VT + VL
Sbjct: 400 GNIEAAFQVFNEMGDGNVISWTSMITGFAKHGFATRALETFHKMLEAGVSPNEVTYIAVL 459
Query: 336 SACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPD 395
SACS+ G + EG + F+SMK ++ + P+ EHYAC+VDLLGR+G +E+AM+L+ +MPF+ D
Sbjct: 460 SACSHVGLISEGLKHFKSMKVEHGIVPRMEHYACVVDLLGRSGHLEEAMELVNSMPFKAD 519
Query: 396 AIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKN 455
A++ + LGACR H +DL + AA+ +L+ +P + YILLSN++AS G++ +VAE+RK
Sbjct: 520 ALVLRTFLGACRVHGNMDLGKHAAEMILEQDPHDPAAYILLSNLHASAGQWEEVAEIRKK 579
Query: 456 MRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSF 515
M++RN+ K GCSWIEVE KVH F D SHP+ I L+++ ++E GY P + F
Sbjct: 580 MKERNLTKEAGCSWIEVENKVHKFYVGD-TSHPQAQEIYDELDQLALKIKELGYIPSTDF 638
Query: 516 VLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMG 575
VLHDV+EE+K L HSEK+AVAYG + PIRV KNLRVCGDCH+A K S V
Sbjct: 639 VLHDVEEEQKEQYLFQHSEKIAVAYGFISTSTSRPIRVFKNLRVCGDCHTAFKYFSIVRR 698
Query: 576 REIILRDANRFHHFKDGLCSCRDYW 600
+EI+LRDANRFHHFKDG CSC DYW
Sbjct: 699 KEIVLRDANRFHHFKDGTCSCNDYW 723
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 122/489 (24%), Positives = 224/489 (45%), Gaps = 33/489 (6%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPE----KNVVSWTVMLGGFIRDSRIDDARR 58
+R++VSW+A++ Y EA + F+ M E N +T + I +
Sbjct: 4 KRDLVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGKI 63
Query: 59 LFDMMP-----EKDVVAQTNMVLGYCQ-DGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+F + E DV ++ + + +G ++ ++FD MP +NV++WT MI+ +
Sbjct: 64 IFGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRFQQL 123
Query: 113 NRIDVARKLFEVM------PEKNEVSWTAML---MGYTQCGRIQDAWELFKAMPMKSVVA 163
A LF M P++ +S MG GR + + + V
Sbjct: 124 GFSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQFHCLVMKSGLDLDVCVG 183
Query: 164 SN--SMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVY-ERKGYELEVIDLFTLMQK 220
+ M +G V AR VFD+M + +W+ +I Y + G + E I+LF M +
Sbjct: 184 CSLVDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAIITGYVQSGGCDREAIELFLEMVQ 243
Query: 221 EGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVK 280
V+ N + SVL CA+L+ + G QV+A +V+ + V + LI+MY +CG +
Sbjct: 244 GQVKPNHFTFSSVLKACANLSDIWLGEQVYALVVKMRLASINCVGNSLISMYSRCGNMEN 303
Query: 281 GKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSY 340
+ FD K++V +N+I++ YA+ E++ ++F+E+ +G + T +LS S
Sbjct: 304 ARKAFDVLFEKNLVSYNTIVNAYAKSLNSEEAFELFNEIEGAGTGVNAFTFASLLSGASS 363
Query: 341 TGKVKEGREIFES-MKSKYLVEPKTEHYAC--MVDLLGRAGQVEDAMKLIEAMPFEPDAI 397
G + +G +I +KS + K+ + C ++ + R G +E A ++ M + + I
Sbjct: 364 IGAIGKGEQIHSRILKSGF----KSNLHICNALISMYSRCGNIEAAFQVFNEMG-DGNVI 418
Query: 398 IWGSLLGACRTHMKLDLAEVAAKKLLQ--LEPKNAGPYILLSNIYASQGRFHDVAELRKN 455
W S++ H A K+L+ + P N YI + + + G + + K+
Sbjct: 419 SWTSMITGFAKHGFATRALETFHKMLEAGVSP-NEVTYIAVLSACSHVGLISEGLKHFKS 477
Query: 456 MRKRNVIKP 464
M+ + I P
Sbjct: 478 MKVEHGIVP 486
>gi|224096249|ref|XP_002310592.1| predicted protein [Populus trichocarpa]
gi|222853495|gb|EEE91042.1| predicted protein [Populus trichocarpa]
Length = 747
Score = 479 bits (1232), Expect = e-132, Method: Compositional matrix adjust.
Identities = 255/713 (35%), Positives = 400/713 (56%), Gaps = 114/713 (15%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MP + SW ++ GY ++G + +A +F +P ++ VSWT ++ G+ + R +DA ++F
Sbjct: 36 MPVKTTFSWNTILSGYAKQGKLEKAHQVFDLIPVRDSVSWTTIIVGYNQMGRFEDAIKIF 95
Query: 61 -DMMPEKDVVAQ---TNMV---------------------LG--------------YCQD 81
DM+ +K + Q TN++ LG Y +
Sbjct: 96 VDMVKDKVLPTQFTLTNVLASCAATGSRGIGKKVHSFVVKLGLHACVPVANSLLNMYAKT 155
Query: 82 GRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYT 141
G + + +FD M +N SW MIS ++N R+D+A FE++ E++ VSW +M+ G
Sbjct: 156 GDLKMAKVVFDRMKLRNTSSWNAMISLHMNCGRVDLALAQFELLSERDIVSWNSMIAGCN 215
Query: 142 QCGRIQDAWELFKAM-------PMKSVVAS------------------------------ 164
Q G +A + F ++ P + +AS
Sbjct: 216 QHGFDNEALQFFSSILKDTSLKPDRFSLASALSACANLEKLSFGKQIHGYIVRTMFDASG 275
Query: 165 ---NSMILGLGQNGEVQKARVVFDQ---------------------------------MR 188
N++I ++G V+ AR + +Q ++
Sbjct: 276 AVGNALISMYAKSGGVEIARRIIEQSGISDLDVIAFTALLNGYVKLGDITPARQIFNSLK 335
Query: 189 EKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQ 248
+ D W+ MI Y + G + I++F M EG R N +L ++LS +S+ SL+HG+Q
Sbjct: 336 DPDVVAWTAMIVGYVQNGLNNDAIEVFKTMVSEGPRPNSFTLAAMLSASSSVTSLNHGKQ 395
Query: 249 VHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNF-ASKDIVMWNSIISGYAQYG 307
+HA +R + V + L TMY K G + + +F+ ++D V W S+I AQ+G
Sbjct: 396 IHASAIRSGEALSPSVGNALTTMYAKAGSINGARKVFNLLRQNRDTVSWTSMIMALAQHG 455
Query: 308 LGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHY 367
LGE+++++F +M + G+ PD +T VGVLSAC++ G V++GR F+ MK+ + ++P HY
Sbjct: 456 LGEEAIELFEQMLTLGIKPDHITYVGVLSACTHGGLVEQGRSYFDLMKNVHKIDPTLSHY 515
Query: 368 ACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEP 427
ACMVDL GRAG +++A K +E MP EPD I WGSLL +C+ + +DLA+VAA++LL +EP
Sbjct: 516 ACMVDLFGRAGLLQEAYKFVENMPMEPDVIAWGSLLSSCKVYKNVDLAKVAAERLLLIEP 575
Query: 428 KNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSH 487
N+G Y L+N+Y+S G++ D A++RK M+ R V K G SW++++ K H+F D + H
Sbjct: 576 NNSGAYSALANVYSSCGKWDDAAKIRKLMKARGVKKEQGLSWVQIQNKTHVFGVEDGL-H 634
Query: 488 PEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPE 547
P+ I +M++KI +++ G+ PD+ VLHD++ E K LRYHSEKLA+A+G++ PE
Sbjct: 635 PQKDEIYKMMDKIWKEIKKMGFAPDTESVLHDLEVEVKDQILRYHSEKLAIAFGIISTPE 694
Query: 548 GVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
+R+MKNLRVC DCH+AIK ISK++ REII+RDA RFHHFKDG CSC+DYW
Sbjct: 695 NTTLRIMKNLRVCNDCHNAIKFISKLVDREIIVRDATRFHHFKDGSCSCKDYW 747
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 115/442 (26%), Positives = 208/442 (47%), Gaps = 55/442 (12%)
Query: 16 YVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMV 75
Y + G +A LF +MP K SW +L G+ + +++ A ++FD++P +D V+ T ++
Sbjct: 20 YAKTGFHLDAHDLFNEMPVKTTFSWNTILSGYAKQGKLEKAHQVFDLIPVRDSVSWTTII 79
Query: 76 LGYCQDGRVDEGREIFDEMPKKNVI----SWTTMISGYVNNNRIDVARK---------LF 122
+GY Q GR ++ +IF +M K V+ + T +++ + +K L
Sbjct: 80 VGYNQMGRFEDAIKIFVDMVKDKVLPTQFTLTNVLASCAATGSRGIGKKVHSFVVKLGLH 139
Query: 123 EVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARV 182
+P N ++L Y + G ++ A +F M +++ + N+MI G V A
Sbjct: 140 ACVPVAN-----SLLNMYAKTGDLKMAKVVFDRMKLRNTSSWNAMISLHMNCGRVDLALA 194
Query: 183 VFDQMREKDDATWSGMIKVYERKGYELEVIDLF-TLMQKEGVRVNFPSLISVLSVCASLA 241
F+ + E+D +W+ MI + G++ E + F ++++ ++ + SL S LS CA+L
Sbjct: 195 QFELLSERDIVSWNSMIAGCNQHGFDNEALQFFSSILKDTSLKPDRFSLASALSACANLE 254
Query: 242 SLDHGRQVHAQLVRCQFDVDVYVASVLITM------------------------------ 271
L G+Q+H +VR FD V + LI+M
Sbjct: 255 KLSFGKQIHGYIVRTMFDASGAVGNALISMYAKSGGVEIARRIIEQSGISDLDVIAFTAL 314
Query: 272 ---YIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDD 328
Y+K G++ + IF++ D+V W ++I GY Q GL +++VF M S G P+
Sbjct: 315 LNGYVKLGDITPARQIFNSLKDPDVVAWTAMIVGYVQNGLNNDAIEVFKTMVSEGPRPNS 374
Query: 329 VTLVGVLSACSYTGKVKEGREIFES-MKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLI 387
TL +LSA S + G++I S ++S + P + + + +AG + A K+
Sbjct: 375 FTLAAMLSASSSVTSLNHGKQIHASAIRSGEALSPSVGN--ALTTMYAKAGSINGARKVF 432
Query: 388 EAMPFEPDAIIWGSLLGACRTH 409
+ D + W S++ A H
Sbjct: 433 NLLRQNRDTVSWTSMIMALAQH 454
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 91/350 (26%), Positives = 165/350 (47%), Gaps = 37/350 (10%)
Query: 140 YTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMI 199
Y + G DA +LF MP+K+ + N+++ G + G+++KA VFD + +D +W+ +I
Sbjct: 20 YAKTGFHLDAHDLFNEMPVKTTFSWNTILSGYAKQGKLEKAHQVFDLIPVRDSVSWTTII 79
Query: 200 KVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFD 259
Y + G + I +F M K+ V +L +VL+ CA+ S G++VH+ +V+
Sbjct: 80 VGYNQMGRFEDAIKIFVDMVKDKVLPTQFTLTNVLASCAATGSRGIGKKVHSFVVKLGLH 139
Query: 260 VDVYVASVLITMYIKCGELVKGKLIFDN-------------------------------F 288
V VA+ L+ MY K G+L K++FD
Sbjct: 140 ACVPVANSLLNMYAKTGDLKMAKVVFDRMKLRNTSSWNAMISLHMNCGRVDLALAQFELL 199
Query: 289 ASKDIVMWNSIISGYAQYGLGEKSLKVFHEMF-SSGVMPDDVTLVGVLSACSYTGKVKEG 347
+ +DIV WNS+I+G Q+G ++L+ F + + + PD +L LSAC+ K+ G
Sbjct: 200 SERDIVSWNSMIAGCNQHGFDNEALQFFSSILKDTSLKPDRFSLASALSACANLEKLSFG 259
Query: 348 REIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPF-EPDAIIWGSLLGAC 406
++I + + + + ++ + ++G VE A ++IE + D I + +LL
Sbjct: 260 KQIHGYI-VRTMFDASGAVGNALISMYAKSGGVEIARRIIEQSGISDLDVIAFTALLNG- 317
Query: 407 RTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNM 456
++KL A + L+ + + + Y G +D E+ K M
Sbjct: 318 --YVKLGDITPARQIFNSLKDPDVVAWTAMIVGYVQNGLNNDAIEVFKTM 365
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 81/223 (36%), Gaps = 72/223 (32%)
Query: 253 LVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYA-------- 304
+V+ VY+ + L+ +Y K G + +F+ K WN+I+SGYA
Sbjct: 1 MVKLGLTFSVYLMNNLMNLYAKTGFHLDAHDLFNEMPVKTTFSWNTILSGYAKQGKLEKA 60
Query: 305 -----------------------QYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYT 341
Q G E ++K+F +M V+P TL VL++C+ T
Sbjct: 61 HQVFDLIPVRDSVSWTTIIVGYNQMGRFEDAIKIFVDMVKDKVLPTQFTLTNVLASCAAT 120
Query: 342 GK-----------------------------------VKEGREIFESMKSKYLVEPKTEH 366
G +K + +F+ MK + T
Sbjct: 121 GSRGIGKKVHSFVVKLGLHACVPVANSLLNMYAKTGDLKMAKVVFDRMKLR-----NTSS 175
Query: 367 YACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTH 409
+ M+ L G+V+ A+ E + E D + W S++ C H
Sbjct: 176 WNAMISLHMNCGRVDLALAQFELLS-ERDIVSWNSMIAGCNQH 217
>gi|449470104|ref|XP_004152758.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
gi|449504088|ref|XP_004162249.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 478 bits (1231), Expect = e-132, Method: Compositional matrix adjust.
Identities = 238/591 (40%), Positives = 365/591 (61%), Gaps = 13/591 (2%)
Query: 22 ITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQD 81
+ A LF +MP++N WT ++ G++R+ + AR + D M E+ +A M+ GY
Sbjct: 208 MASARKLFDEMPKRNEFIWTTLITGYVRNGDLTGAREILDTMTEQPGIAWNAMISGYLHH 267
Query: 82 GRVDEGREIFDEMPKKNV----ISWTTMISGYVNNNRIDVARKLF------EVMPEKNEV 131
G ++ +F +M V ++T++IS + + +++ E+ P+++ +
Sbjct: 268 GLFEDALTLFRKMRLLGVQVDESTYTSVISACADGGFFLLGKQVHAYILKNELNPDRDFL 327
Query: 132 --SWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMRE 189
++ Y + G++ A ++F MP+K ++ N+++ G G +++A+ F QM E
Sbjct: 328 LSVGNTLITLYWKYGKVDGARKIFYEMPVKDIITWNTLLSGYVNAGRMEEAKSFFAQMPE 387
Query: 190 KDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQV 249
K+ TW+ MI + G+ + + LF M+ +G N + ++ C+ L +L++GRQ+
Sbjct: 388 KNLLTWTVMISGLAQNGFGEQALKLFNQMKLDGYEPNDYAFAGAITACSVLGALENGRQL 447
Query: 250 HAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLG 309
HAQ+V D + V + +ITMY +CG + + +F D V WNS+I+ Q+G G
Sbjct: 448 HAQIVHLGHDSTLSVGNAMITMYARCGIVEAARTMFLTMPFVDPVSWNSMIAALGQHGHG 507
Query: 310 EKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYAC 369
K+++++ +M G++PD T + VLSACS+ G V+EG F SM Y + P +HYA
Sbjct: 508 VKAIELYEQMLKEGILPDRRTFLTVLSACSHAGLVEEGNRYFNSMLENYGIAPGEDHYAR 567
Query: 370 MVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKN 429
M+DL RAG+ DA +I++MPFE A IW +LL CRTH +DL AA+KL +L P++
Sbjct: 568 MIDLFCRAGKFSDAKNVIDSMPFEARAPIWEALLAGCRTHGNMDLGIEAAEKLFKLIPQH 627
Query: 430 AGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPE 489
G Y+LLSN+YAS GR++DVA RK MR R V K P CSW EVE KVH+F D V HPE
Sbjct: 628 DGTYVLLSNMYASLGRWNDVARTRKLMRDRGVKKEPACSWTEVENKVHVFLVDDTV-HPE 686
Query: 490 HPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGV 549
I LEK+ +++ GY PD+ +VLHD++ E K ++L HSEKLAVA+GL+KLP+G
Sbjct: 687 VLSIYNYLEKLNLEMKKIGYIPDTKYVLHDMESEHKEYALSTHSEKLAVAFGLMKLPQGA 746
Query: 550 PIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
+RV KNLR+CGDCH+AIK +SKV+GREI++RD RFHHFK+G CSCR+YW
Sbjct: 747 TVRVFKNLRICGDCHNAIKFMSKVVGREIVVRDGKRFHHFKNGECSCRNYW 797
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 121/441 (27%), Positives = 198/441 (44%), Gaps = 90/441 (20%)
Query: 56 ARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMP--KKNVISWTTMISGYVNNN 113
AR+LFD +P+ DV+A+T ++ Y G + REIF+E P ++ + + MI+GY + N
Sbjct: 67 ARKLFDEIPQPDVIARTTLITAYSALGNLKMAREIFNETPLDMRDTVFYNAMITGYSHMN 126
Query: 114 RIDVARKLFEVMPEKN----EVSWTAMLMGYT-------QCGRIQ--------------- 147
A +LF M N + ++ ++L T QCG++
Sbjct: 127 DGHSAIELFRAMRWANFQPDDFTFASVLSASTLIFYDERQCGQMHGTVVKFGIEIFPAVL 186
Query: 148 -----------------------DAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVF 184
A +LF MP ++ ++I G +NG++ AR +
Sbjct: 187 NALLSVYVKCASSPLVSSSSLMASARKLFDEMPKRNEFIWTTLITGYVRNGDLTGAREIL 246
Query: 185 DQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLD 244
D M E+ W+ MI Y G + + LF M+ GV+V+ + SV+S CA
Sbjct: 247 DTMTEQPGIAWNAMISGYLHHGLFEDALTLFRKMRLLGVQVDESTYTSVISACADGGFFL 306
Query: 245 HGRQVHAQLVRCQFDVD----VYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSII 300
G+QVHA +++ + + D + V + LIT+Y K G++ + IF KDI+ WN+++
Sbjct: 307 LGKQVHAYILKNELNPDRDFLLSVGNTLITLYWKYGKVDGARKIFYEMPVKDIITWNTLL 366
Query: 301 SGY-------------------------------AQYGLGEKSLKVFHEMFSSGVMPDDV 329
SGY AQ G GE++LK+F++M G P+D
Sbjct: 367 SGYVNAGRMEEAKSFFAQMPEKNLLTWTVMISGLAQNGFGEQALKLFNQMKLDGYEPNDY 426
Query: 330 TLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYA-CMVDLLGRAGQVEDAMKLIE 388
G ++ACS G ++ GR++ + +L T M+ + R G VE A +
Sbjct: 427 AFAGAITACSVLGALENGRQLHAQI--VHLGHDSTLSVGNAMITMYARCGIVEAARTMFL 484
Query: 389 AMPFEPDAIIWGSLLGACRTH 409
MPF D + W S++ A H
Sbjct: 485 TMPF-VDPVSWNSMIAALGQH 504
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 97/408 (23%), Positives = 179/408 (43%), Gaps = 92/408 (22%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MP+RN WT ++ GYV G +T A + M E+ ++W M+ G++ +DA LF
Sbjct: 218 MPKRNEFIWTTLITGYVRNGDLTGAREILDTMTEQPGIAWNAMISGYLHHGLFEDALTLF 277
Query: 61 DMM-----------------------------------------PEKDVVAQ--TNMVLG 77
M P++D + ++
Sbjct: 278 RKMRLLGVQVDESTYTSVISACADGGFFLLGKQVHAYILKNELNPDRDFLLSVGNTLITL 337
Query: 78 YCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAML 137
Y + G+VD R+IF EMP K++I+W T++SGYVN R++ A+ F MPEKN ++WT M+
Sbjct: 338 YWKYGKVDGARKIFYEMPVKDIITWNTLLSGYVNAGRMEEAKSFFAQMPEKNLLTWTVMI 397
Query: 138 MGYTQCGRIQDAWELFKAMPM--------------------------------------- 158
G Q G + A +LF M +
Sbjct: 398 SGLAQNGFGEQALKLFNQMKLDGYEPNDYAFAGAITACSVLGALENGRQLHAQIVHLGHD 457
Query: 159 KSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLM 218
++ N+MI + G V+ AR +F M D +W+ MI + G+ ++ I+L+ M
Sbjct: 458 STLSVGNAMITMYARCGIVEAARTMFLTMPFVDPVSWNSMIAALGQHGHGVKAIELYEQM 517
Query: 219 QKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDV----DVYVASVLITMYIK 274
KEG+ + + ++VLS C+ ++ G + ++ + + D Y + +I ++ +
Sbjct: 518 LKEGILPDRRTFLTVLSACSHAGLVEEGNRYFNSMLE-NYGIAPGEDHY--ARMIDLFCR 574
Query: 275 CGELVKGKLIFDN--FASKDIVMWNSIISGYAQYGLGEKSLKVFHEMF 320
G+ K + D+ F ++ + W ++++G +G + ++ ++F
Sbjct: 575 AGKFSDAKNVIDSMPFEARAPI-WEALLAGCRTHGNMDLGIEAAEKLF 621
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 100/388 (25%), Positives = 178/388 (45%), Gaps = 36/388 (9%)
Query: 98 NVISWTTMISGYVNNNRIDV---------ARKLFEVMPEKNEVSWTAMLMGYTQCGRIQD 148
+VI+ + G++ N ID+ ARKLF+ +P+ + ++ T ++ Y+ G ++
Sbjct: 38 HVIASGFKLRGHIVNRLIDIYWKSSDFVYARKLFDEIPQPDVIARTTLITAYSALGNLKM 97
Query: 149 AWELFKAMP--MKSVVASNSMILGLGQNGEVQKARVVFDQMR----EKDDATWSGMIKVY 202
A E+F P M+ V N+MI G + A +F MR + DD T++ ++
Sbjct: 98 AREIFNETPLDMRDTVFYNAMITGYSHMNDGHSAIELFRAMRWANFQPDDFTFASVLSAS 157
Query: 203 ERKGY-ELEVIDLFTLMQKEGVRVNFP----SLISVLSVCASLASLDHGRQVHAQLVRCQ 257
Y E + + + K G+ + FP +L+SV CAS + + + R
Sbjct: 158 TLIFYDERQCGQMHGTVVKFGIEI-FPAVLNALLSVYVKCASSPLVSSSSLMAS--ARKL 214
Query: 258 FD----VDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSL 313
FD + ++ + LIT Y++ G+L + I D + + WN++ISGY +GL E +L
Sbjct: 215 FDEMPKRNEFIWTTLITGYVRNGDLTGAREILDTMTEQPGIAWNAMISGYLHHGLFEDAL 274
Query: 314 KVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHY----AC 369
+F +M GV D+ T V+SAC+ G G+++ + L P +
Sbjct: 275 TLFRKMRLLGVQVDESTYTSVISACADGGFFLLGKQVHAYILKNEL-NPDRDFLLSVGNT 333
Query: 370 MVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKN 429
++ L + G+V+ A K+ MP + D I W +LL ++ E A Q+ KN
Sbjct: 334 LITLYWKYGKVDGARKIFYEMPVK-DIITWNTLLSG---YVNAGRMEEAKSFFAQMPEKN 389
Query: 430 AGPYILLSNIYASQGRFHDVAELRKNMR 457
+ ++ + A G +L M+
Sbjct: 390 LLTWTVMISGLAQNGFGEQALKLFNQMK 417
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 135/295 (45%), Gaps = 25/295 (8%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MP +++++W ++ GYV G + EA + F QMPEKN+++WTVM+ G ++ + A +LF
Sbjct: 354 MPVKDIITWNTLLSGYVNAGRMEEAKSFFAQMPEKNLLTWTVMISGLAQNGFGEQALKLF 413
Query: 61 DMMP----EKDVVAQTNMVLGYCQDGRVDEGREIFDEM----PKKNVISWTTMISGYVNN 112
+ M E + A + G ++ GR++ ++ + MI+ Y
Sbjct: 414 NQMKLDGYEPNDYAFAGAITACSVLGALENGRQLHAQIVHLGHDSTLSVGNAMITMYARC 473
Query: 113 NRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGL- 171
++ AR +F MP + VSW +M+ Q G A EL++ M + ++ L +
Sbjct: 474 GIVEAARTMFLTMPFVDPVSWNSMIAALGQHGHGVKAIELYEQMLKEGILPDRRTFLTVL 533
Query: 172 ---GQNGEVQKARVVFDQMREK-----DDATWSGMIKVYERKGYELEVIDLFTLMQKEGV 223
G V++ F+ M E + ++ MI ++ R G + ++ M E
Sbjct: 534 SACSHAGLVEEGNRYFNSMLENYGIAPGEDHYARMIDLFCRAGKFSDAKNVIDSMPFEA- 592
Query: 224 RVNFPSLISVLSVCASLASLDHGRQVHAQLVRC--QFDVDVYVASVLITMYIKCG 276
P ++L+ C + ++D G + +L + Q D YV +L MY G
Sbjct: 593 --RAPIWEALLAGCRTHGNMDLGIEAAEKLFKLIPQHD-GTYV--LLSNMYASLG 642
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 113/284 (39%), Gaps = 58/284 (20%)
Query: 223 VRVNFPSLISVLSVCA--SLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVK 280
VRV + L++C +L+S R VH ++ F + ++ + LI +Y K + V
Sbjct: 7 VRVLANRYFAQLNLCCPQNLSSYSLARTVHGHVIASGFKLRGHIVNRLIDIYWKSSDFVY 66
Query: 281 GKLIFDNFAS---------------------------------KDIVMWNSIISGYAQYG 307
+ +FD +D V +N++I+GY+
Sbjct: 67 ARKLFDEIPQPDVIARTTLITAYSALGNLKMAREIFNETPLDMRDTVFYNAMITGYSHMN 126
Query: 308 LGEKSLKVFHEMFSSGVMPDDVTLVGVLSACS------------YTGKVKEGREIFESMK 355
G ++++F M + PDD T VLSA + + VK G EIF ++
Sbjct: 127 DGHSAIELFRAMRWANFQPDDFTFASVLSASTLIFYDERQCGQMHGTVVKFGIEIFPAVL 186
Query: 356 SKYLVEPKTEHYAC-MVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDL 414
+ L + + C L+ + + A KL + MP + + IW +L+ + L
Sbjct: 187 NALL----SVYVKCASSPLVSSSSLMASARKLFDEMP-KRNEFIWTTLITGYVRNGDL-- 239
Query: 415 AEVAAKKLLQLEPKNAG-PYILLSNIYASQGRFHDVAELRKNMR 457
A+++L + G + + + Y G F D L + MR
Sbjct: 240 --TGAREILDTMTEQPGIAWNAMISGYLHHGLFEDALTLFRKMR 281
>gi|242048970|ref|XP_002462229.1| hypothetical protein SORBIDRAFT_02g022150 [Sorghum bicolor]
gi|241925606|gb|EER98750.1| hypothetical protein SORBIDRAFT_02g022150 [Sorghum bicolor]
Length = 686
Score = 478 bits (1230), Expect = e-132, Method: Compositional matrix adjust.
Identities = 234/556 (42%), Positives = 345/556 (62%), Gaps = 49/556 (8%)
Query: 2 PERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFD 61
PE++ VSW M+ Y+ G I EA LF E + +SW ++ G+++ S+I++A+++F+
Sbjct: 155 PEKDAVSWNGMLAAYIRNGRIQEARDLFDSRTEWDAISWNALMAGYVQCSQIEEAQKMFN 214
Query: 62 MMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKL 121
MP++DVV+ MV G+ + G + E R +FD P ++V +WT ++SGY N ++ A+++
Sbjct: 215 RMPQRDVVSWNTMVSGHARRGDMAEARRLFDVAPIRDVFTWTAVVSGYAQNGMLEEAKRV 274
Query: 122 FEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKAR 181
F+ MPEKN VSW AM+ Y Q +++A ELF AMP ++V + N+M+ G Q G + +AR
Sbjct: 275 FDAMPEKNAVSWNAMMAAYVQRRMMEEAKELFDAMPCRNVASWNTMLTGYAQAGMLDEAR 334
Query: 182 VVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLA 241
+FD M +KD +W+ M+ Y + G+ E + LF M + CA
Sbjct: 335 AIFDMMPQKDAVSWAAMLAAYSQGGFSEETLQLFKEMGR----------------CA--- 375
Query: 242 SLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIIS 301
MY KCG + + F+ +DIV WN++I+
Sbjct: 376 -----------------------------MYFKCGNMEEAHSAFEEMEERDIVSWNTMIA 406
Query: 302 GYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVE 361
GYA++G G+++L+VF M + PDD+TLVGVL+ACS++G V++G F SM + V
Sbjct: 407 GYARHGFGKEALEVFDTMRKTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHRDFGVT 466
Query: 362 PKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKK 421
K EHY CM+DLLGRAG++++A+ L++ MPFEPD+ +WG+LLGA R H +L AA+K
Sbjct: 467 AKPEHYTCMIDLLGRAGRLDEAVNLMKDMPFEPDSTMWGALLGASRIHRNSELGRNAAEK 526
Query: 422 LLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTG 481
+ +LEP+NAG Y+LLSNIYAS G++ DV ++R M +R V K PG SWIEV+ KVH F+
Sbjct: 527 IFELEPENAGMYVLLSNIYASSGKWRDVDKMRLMMHERGVKKVPGFSWIEVQNKVHTFSV 586
Query: 482 RDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYG 541
D V HPE I LE + +++AGY + VLHDV+EEEK H L+YHSEKLAVAYG
Sbjct: 587 GDSV-HPEREDIYGFLEDLDIRMKKAGYVSATDMVLHDVEEEEKEHMLKYHSEKLAVAYG 645
Query: 542 LVKLPEGVPIRVMKNL 557
++K+P G PIR NL
Sbjct: 646 ILKIPPGRPIRQCCNL 661
>gi|27817913|dbj|BAC55678.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|37806252|dbj|BAC99769.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
Length = 613
Score = 477 bits (1228), Expect = e-132, Method: Compositional matrix adjust.
Identities = 239/594 (40%), Positives = 360/594 (60%), Gaps = 4/594 (0%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRD-SRIDDARRLFDMMPEKDV 68
T V V G +T A F P K ++ +L G+ R R+ DAR LFD +P D
Sbjct: 21 TVAVAAAVRRGDLTGAEEAFASTPRKTTATYNCLLAGYARALGRLADARHLFDRIPTPDA 80
Query: 69 VAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEK 128
V+ ++ + G D R +F MP ++V+SW TM+SG + ++ A+ +F MP +
Sbjct: 81 VSYNTLLSCHFASGDADGARRLFASMPVRDVVSWNTMVSGLSKSGAVEEAKAVFLAMPVR 140
Query: 129 NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKS-VVASNSMILGLGQNGEVQKARVVFDQM 187
N VSW AM+ G+ + A E F+ P K V +M+ G G V KA F+ M
Sbjct: 141 NSVSWNAMVSGFACSRDMSAAEEWFRNAPEKGDAVLWTAMVSGYMDIGNVVKAIEYFEAM 200
Query: 188 REKDDATWSGMIKVYERKGYELEVIDLFTLMQKEG-VRVNFPSLISVLSVCASLASLDHG 246
++ +W+ ++ Y + + + + LF M +E V+ N +L SVL C++L++L G
Sbjct: 201 PVRNLVSWNAVVAGYVKNSHADDALRLFRTMVREANVQPNASTLSSVLLGCSNLSALGFG 260
Query: 247 RQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQY 306
+Q+H ++ ++ V + L++MY KCG+L +F ++D+V WN++ISGYAQ+
Sbjct: 261 KQIHQWCMKLPLSRNLTVGTSLVSMYCKCGDLSSACKLFGEMHTRDVVAWNAMISGYAQH 320
Query: 307 GLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEH 366
G G++++ +F M GV P+ +T V VL+AC +TG G FE M+ Y +EP+ +H
Sbjct: 321 GDGKEAINLFERMKDEGVEPNWITFVAVLTACIHTGLCDFGIRCFEGMQELYGIEPRVDH 380
Query: 367 YACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLE 426
Y+CMVDLL RAG++E A+ LI +MPFEP +G+LL ACR + L+ AE+AA KL++ +
Sbjct: 381 YSCMVDLLCRAGKLERAVDLIRSMPFEPHPSAYGTLLAACRVYKNLEFAELAAGKLIEKD 440
Query: 427 PKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVS 486
P++AG Y+ L+NIYA ++ DV+ +R+ M+ V+K PG SWIE++ +H F D +
Sbjct: 441 PQSAGAYVQLANIYAGANQWDDVSRVRRWMKDNAVVKTPGYSWIEIKGVMHEFRSNDRL- 499
Query: 487 HPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLP 546
HP+ +I L ++ ++ GY PD FVLHDVDE KV L HSEKLA+++GL+
Sbjct: 500 HPQLYLIHEKLGQLAERMKAMGYVPDLDFVLHDVDETLKVQMLMRHSEKLAISFGLISTA 559
Query: 547 EGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
G+ +R+ KNLRVCGDCH+A K+ISK+ REIILRD RFHHF+ G CSC DYW
Sbjct: 560 PGMTLRIFKNLRVCGDCHNAAKVISKIEDREIILRDTTRFHHFRGGHCSCGDYW 613
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 82/256 (32%), Positives = 132/256 (51%), Gaps = 10/256 (3%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MP R+VVSW MV G + G + EA +F MP +N VSW M+ GF + A F
Sbjct: 106 MPVRDVVSWNTMVSGLSKSGAVEEAKAVFLAMPVRNSVSWNAMVSGFACSRDMSAAEEWF 165
Query: 61 DMMPEK-DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVAR 119
PEK D V T MV GY G V + E F+ MP +N++SW +++GYV N+ D A
Sbjct: 166 RNAPEKGDAVLWTAMVSGYMDIGNVVKAIEYFEAMPVRNLVSWNAVVAGYVKNSHADDAL 225
Query: 120 KLFEVM-----PEKNEVSWTAMLMGYTQCGRIQDAWELFK---AMPM-KSVVASNSMILG 170
+LF M + N + +++L+G + + ++ + +P+ +++ S++
Sbjct: 226 RLFRTMVREANVQPNASTLSSVLLGCSNLSALGFGKQIHQWCMKLPLSRNLTVGTSLVSM 285
Query: 171 LGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSL 230
+ G++ A +F +M +D W+ MI Y + G E I+LF M+ EGV N+ +
Sbjct: 286 YCKCGDLSSACKLFGEMHTRDVVAWNAMISGYAQHGDGKEAINLFERMKDEGVEPNWITF 345
Query: 231 ISVLSVCASLASLDHG 246
++VL+ C D G
Sbjct: 346 VAVLTACIHTGLCDFG 361
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 79/344 (22%), Positives = 143/344 (41%), Gaps = 47/344 (13%)
Query: 253 LVRCQFDVDV-----YVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYG 307
L RC F +++V + ++ G+L + F + K +N +++GYA+
Sbjct: 3 LCRCPFLASARSHTCSLSTVAVAAAVRRGDLTGAEEAFASTPRKTTATYNCLLAGYAR-A 61
Query: 308 LGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHY 367
LG L +F PD V+ +LS +G R +F SM + +V T
Sbjct: 62 LGR--LADARHLFDRIPTPDAVSYNTLLSCHFASGDADGARRLFASMPVRDVVSWNT--- 116
Query: 368 ACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLG--ACRTHMKLDLAEVAAKKLLQL 425
MV L ++G VE+A + AMP +++ W +++ AC M AA++ +
Sbjct: 117 --MVSGLSKSGAVEEAKAVFLAMPVR-NSVSWNAMVSGFACSRDMS------AAEEWFRN 167
Query: 426 EPKNAGPYILLSNI--YASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRD 483
P+ + + + Y G E + M RN++ SW V G
Sbjct: 168 APEKGDAVLWTAMVSGYMDIGNVVKAIEYFEAMPVRNLV-----SWNAV------VAGYV 216
Query: 484 CVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLV 543
SH + +R+ ++REA P++S + + + +L + + + +
Sbjct: 217 KNSHADDA--LRLFRT---MVREANVQPNASTLSSVLLGCSNLSALGFGKQ---IHQWCM 268
Query: 544 KLPEGVPIRVMKNLRV----CGDCHSAIKLISKVMGREIILRDA 583
KLP + V +L CGD SA KL ++ R+++ +A
Sbjct: 269 KLPLSRNLTVGTSLVSMYCKCGDLSSACKLFGEMHTRDVVAWNA 312
>gi|222641236|gb|EEE69368.1| hypothetical protein OsJ_28705 [Oryza sativa Japonica Group]
Length = 662
Score = 477 bits (1227), Expect = e-132, Method: Compositional matrix adjust.
Identities = 239/594 (40%), Positives = 360/594 (60%), Gaps = 4/594 (0%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRD-SRIDDARRLFDMMPEKDV 68
T V V G +T A F P K ++ +L G+ R R+ DAR LFD +P D
Sbjct: 70 TVAVAAAVRRGDLTGAEEAFASTPRKTTATYNCLLAGYARALGRLADARHLFDRIPTPDA 129
Query: 69 VAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEK 128
V+ ++ + G D R +F MP ++V+SW TM+SG + ++ A+ +F MP +
Sbjct: 130 VSYNTLLSCHFASGDADGARRLFASMPVRDVVSWNTMVSGLSKSGAVEEAKAVFLAMPVR 189
Query: 129 NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKS-VVASNSMILGLGQNGEVQKARVVFDQM 187
N VSW AM+ G+ + A E F+ P K V +M+ G G V KA F+ M
Sbjct: 190 NSVSWNAMVSGFACSRDMSAAEEWFRNAPEKGDAVLWTAMVSGYMDIGNVVKAIEYFEAM 249
Query: 188 REKDDATWSGMIKVYERKGYELEVIDLFTLMQKEG-VRVNFPSLISVLSVCASLASLDHG 246
++ +W+ ++ Y + + + + LF M +E V+ N +L SVL C++L++L G
Sbjct: 250 PVRNLVSWNAVVAGYVKNSHADDALRLFRTMVREANVQPNASTLSSVLLGCSNLSALGFG 309
Query: 247 RQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQY 306
+Q+H ++ ++ V + L++MY KCG+L +F ++D+V WN++ISGYAQ+
Sbjct: 310 KQIHQWCMKLPLSRNLTVGTSLVSMYCKCGDLSSACKLFGEMHTRDVVAWNAMISGYAQH 369
Query: 307 GLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEH 366
G G++++ +F M GV P+ +T V VL+AC +TG G FE M+ Y +EP+ +H
Sbjct: 370 GDGKEAINLFERMKDEGVEPNWITFVAVLTACIHTGLCDFGIRCFEGMQELYGIEPRVDH 429
Query: 367 YACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLE 426
Y+CMVDLL RAG++E A+ LI +MPFEP +G+LL ACR + L+ AE+AA KL++ +
Sbjct: 430 YSCMVDLLCRAGKLERAVDLIRSMPFEPHPSAYGTLLAACRVYKNLEFAELAAGKLIEKD 489
Query: 427 PKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVS 486
P++AG Y+ L+NIYA ++ DV+ +R+ M+ V+K PG SWIE++ +H F D +
Sbjct: 490 PQSAGAYVQLANIYAGANQWDDVSRVRRWMKDNAVVKTPGYSWIEIKGVMHEFRSNDRL- 548
Query: 487 HPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLP 546
HP+ +I L ++ ++ GY PD FVLHDVDE KV L HSEKLA+++GL+
Sbjct: 549 HPQLYLIHEKLGQLAERMKAMGYVPDLDFVLHDVDETLKVQMLMRHSEKLAISFGLISTA 608
Query: 547 EGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
G+ +R+ KNLRVCGDCH+A K+ISK+ REIILRD RFHHF+ G CSC DYW
Sbjct: 609 PGMTLRIFKNLRVCGDCHNAAKVISKIEDREIILRDTTRFHHFRGGHCSCGDYW 662
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 82/256 (32%), Positives = 132/256 (51%), Gaps = 10/256 (3%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MP R+VVSW MV G + G + EA +F MP +N VSW M+ GF + A F
Sbjct: 155 MPVRDVVSWNTMVSGLSKSGAVEEAKAVFLAMPVRNSVSWNAMVSGFACSRDMSAAEEWF 214
Query: 61 DMMPEK-DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVAR 119
PEK D V T MV GY G V + E F+ MP +N++SW +++GYV N+ D A
Sbjct: 215 RNAPEKGDAVLWTAMVSGYMDIGNVVKAIEYFEAMPVRNLVSWNAVVAGYVKNSHADDAL 274
Query: 120 KLFEVM-----PEKNEVSWTAMLMGYTQCGRIQDAWELFK---AMPM-KSVVASNSMILG 170
+LF M + N + +++L+G + + ++ + +P+ +++ S++
Sbjct: 275 RLFRTMVREANVQPNASTLSSVLLGCSNLSALGFGKQIHQWCMKLPLSRNLTVGTSLVSM 334
Query: 171 LGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSL 230
+ G++ A +F +M +D W+ MI Y + G E I+LF M+ EGV N+ +
Sbjct: 335 YCKCGDLSSACKLFGEMHTRDVVAWNAMISGYAQHGDGKEAINLFERMKDEGVEPNWITF 394
Query: 231 ISVLSVCASLASLDHG 246
++VL+ C D G
Sbjct: 395 VAVLTACIHTGLCDFG 410
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 75/328 (22%), Positives = 139/328 (42%), Gaps = 42/328 (12%)
Query: 264 VASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSG 323
+++V + ++ G+L + F + K +N +++GYA+ LG L +F
Sbjct: 68 LSTVAVAAAVRRGDLTGAEEAFASTPRKTTATYNCLLAGYAR-ALGR--LADARHLFDRI 124
Query: 324 VMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDA 383
PD V+ +LS +G R +F SM + +V T MV L ++G VE+A
Sbjct: 125 PTPDAVSYNTLLSCHFASGDADGARRLFASMPVRDVVSWNT-----MVSGLSKSGAVEEA 179
Query: 384 MKLIEAMPFEPDAIIWGSLLG--ACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNI-- 439
+ AMP +++ W +++ AC M AA++ + P+ + + +
Sbjct: 180 KAVFLAMPVR-NSVSWNAMVSGFACSRDMS------AAEEWFRNAPEKGDAVLWTAMVSG 232
Query: 440 YASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEK 499
Y G E + M RN++ SW V G SH + +R+
Sbjct: 233 YMDIGNVVKAIEYFEAMPVRNLV-----SWNAV------VAGYVKNSHADDA--LRLFRT 279
Query: 500 IGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRV 559
++REA P++S + + + +L + + + +KLP + V +L
Sbjct: 280 ---MVREANVQPNASTLSSVLLGCSNLSALGFGKQ---IHQWCMKLPLSRNLTVGTSLVS 333
Query: 560 ----CGDCHSAIKLISKVMGREIILRDA 583
CGD SA KL ++ R+++ +A
Sbjct: 334 MYCKCGDLSSACKLFGEMHTRDVVAWNA 361
>gi|125588087|gb|EAZ28751.1| hypothetical protein OsJ_12773 [Oryza sativa Japonica Group]
Length = 698
Score = 476 bits (1226), Expect = e-131, Method: Compositional matrix adjust.
Identities = 268/702 (38%), Positives = 377/702 (53%), Gaps = 122/702 (17%)
Query: 16 YVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDA-RRLFDMMPEKDVVAQ--- 71
+ + G + +A +F +MPE++ VSWTVM+ G R R +A + L DM + Q
Sbjct: 2 FAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFTL 61
Query: 72 TNMV-----------------------LGYC------------QDGRVDEGREIFDEMPK 96
TN++ LG C + G + +F+ MP
Sbjct: 62 TNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERMPV 121
Query: 97 KNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAM 156
++V SW M+S + R+D+A LFE MP+++ VSW AM+ GY Q G A +LF M
Sbjct: 122 RSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSRM 181
Query: 157 PMKSVVA----------------------------------------SNSMILGLGQNGE 176
+S +A +N++I ++G
Sbjct: 182 LHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGS 241
Query: 177 VQKARVVFDQ---------------------------------MREKDDATWSGMIKVYE 203
V+ AR + DQ M +D W+ MI YE
Sbjct: 242 VENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYE 301
Query: 204 RKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVY 263
+ G E IDLF M G N +L +VLSVCASLA LD+G+Q+H + +R +
Sbjct: 302 QNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSSS 361
Query: 264 VASVLITMYIKCGELVKGKLIFDNFA-SKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSS 322
V++ +ITMY + G + +FD K+ + W S+I AQ+G GE+++ +F EM +
Sbjct: 362 VSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRA 421
Query: 323 GVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVED 382
GV PD +T VGVLSACS+ G V EG+ ++ +K+++ + P+ HYACMVDLL RAG +
Sbjct: 422 GVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSE 481
Query: 383 AMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYAS 442
A + I MP EPDAI WGSLL ACR H +LAE+AA+KLL ++P N+G Y ++N+Y++
Sbjct: 482 AQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYSAIANVYSA 541
Query: 443 QGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPE----HPMIMRMLE 498
GR+ D A + K +++ V K G SW + K+H+F G D V HP+ + M RM E
Sbjct: 542 CGRWSDAARIWKARKEKAVRKETGFSWTHIRSKIHVF-GADDVVHPQRDAVYAMAARMWE 600
Query: 499 KIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLR 558
+I G AG+ PD VLHDVD+E K L HSEKLA+A+GL+ PE +RVMKNLR
Sbjct: 601 EIKG----AGFVPDLQSVLHDVDDELKEELLSRHSEKLAIAFGLISTPEKTTLRVMKNLR 656
Query: 559 VCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
VC DCH+AIK ISKV REII+RDA RFHHF+DGLCSC+DYW
Sbjct: 657 VCNDCHAAIKAISKVTDREIIVRDATRFHHFRDGLCSCKDYW 698
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 70/147 (47%), Gaps = 4/147 (2%)
Query: 271 MYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVT 330
M+ K G L + +F +D V W ++ G + G +++K +M + G P T
Sbjct: 1 MFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFT 60
Query: 331 LVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAM 390
L VLS+C+ T GR++ S K + ++++ G+ G E A + E M
Sbjct: 61 LTNVLSSCAVTQAGAVGRKV-HSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERM 119
Query: 391 PFEPDAIIWGSLLGACRTHM-KLDLAE 416
P + W +++ + TH+ ++DLAE
Sbjct: 120 PVRSVS-SWNAMV-SLNTHLGRMDLAE 144
>gi|224141479|ref|XP_002324099.1| predicted protein [Populus trichocarpa]
gi|222867101|gb|EEF04232.1| predicted protein [Populus trichocarpa]
Length = 676
Score = 475 bits (1222), Expect = e-131, Method: Compositional matrix adjust.
Identities = 231/556 (41%), Positives = 338/556 (60%), Gaps = 43/556 (7%)
Query: 86 EGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGR 145
+ +++FDEMP++++ SW +ISGY + A+ LF+ MPE++ SWTAM+ GY + R
Sbjct: 123 DSQKLFDEMPERDLCSWNILISGYAKMGLLQEAKSLFDKMPERDNFSWTAMISGYVRHDR 182
Query: 146 IQDAWELFKAMPMKSVVASNS--------------------------MILGL-------- 171
+A ELF+ M SN M GL
Sbjct: 183 PNEALELFRMMKRSDNSKSNKFTVSSALAAAAAVPCLRIGKEIHGYIMRTGLDSDEVVWS 242
Query: 172 ------GQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRV 225
G+ G +++AR +FD+M ++D TW+ MI Y + G E DLF + + G+R
Sbjct: 243 ALSDMYGKCGSIEEARHIFDKMVDRDIVTWTAMIDRYFQDGRRKEGFDLFADLLRSGIRP 302
Query: 226 NFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIF 285
N + VL+ CA+ S + G++VH + R FD + AS L+ MY KCG +V + +F
Sbjct: 303 NEFTFSGVLNACANQTSEELGKKVHGYMTRVGFDPFSFAASALVHMYSKCGNMVSAERVF 362
Query: 286 DNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVK 345
D+ W S+I+GYAQ G +++++ F + SG PD +T VGVLSAC++ G V
Sbjct: 363 KETPQPDLFSWTSLIAGYAQNGQPDEAIRYFELLVKSGTQPDHITFVGVLSACAHAGLVD 422
Query: 346 EGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
+G + F S+K +Y + +HYAC++DLL R+GQ ++A +I M +PD +W SLLG
Sbjct: 423 KGLDYFHSIKEQYGLTHTADHYACIIDLLARSGQFDEAENIISKMSMKPDKFLWASLLGG 482
Query: 406 CRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPP 465
CR H L LA+ AA+ L ++EP+N Y+ L+NIYA+ G + +VA++RK M R V+K P
Sbjct: 483 CRIHGNLKLAQRAAEALFEIEPENPATYVTLANIYATAGMWSEVAKIRKTMDDRGVVKKP 542
Query: 466 GCSWIEVEKKVHMF-TGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEE 524
G SWI +++ VH+F G D SHP+ I L K+ ++E G+ PD++FVLHDV++E+
Sbjct: 543 GLSWIAIKRDVHVFLVGDD--SHPKSKEINEFLGKLSKRMKEEGFVPDTNFVLHDVEDEQ 600
Query: 525 KVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDAN 584
K +L YHSEKLAVA+G++ PEG PI+V KNLR C DCH+AIK ISK+ R+II+RD+N
Sbjct: 601 KEQNLSYHSEKLAVAFGIISTPEGTPIKVFKNLRTCVDCHTAIKFISKITNRKIIVRDSN 660
Query: 585 RFHHFKDGLCSCRDYW 600
RFH F+DG CSCRDYW
Sbjct: 661 RFHFFEDGHCSCRDYW 676
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 174/332 (52%), Gaps = 7/332 (2%)
Query: 79 CQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVS----WT 134
CQ R+ E +I ++ K + ++T+I + + + +K+ + + V
Sbjct: 50 CQQNRLKEALQILHQIDKPSASVYSTLIQSCIKSRLLQQGKKVHQHIKLSGFVPGLFILN 109
Query: 135 AMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDAT 194
+L Y +C + D+ +LF MP + + + N +I G + G +Q+A+ +FD+M E+D+ +
Sbjct: 110 RLLEMYAKCDSLMDSQKLFDEMPERDLCSWNILISGYAKMGLLQEAKSLFDKMPERDNFS 169
Query: 195 WSGMIKVYERKGYELEVIDLFTLMQK-EGVRVNFPSLISVLSVCASLASLDHGRQVHAQL 253
W+ MI Y R E ++LF +M++ + + N ++ S L+ A++ L G+++H +
Sbjct: 170 WTAMISGYVRHDRPNEALELFRMMKRSDNSKSNKFTVSSALAAAAAVPCLRIGKEIHGYI 229
Query: 254 VRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSL 313
+R D D V S L MY KCG + + + IFD +DIV W ++I Y Q G ++
Sbjct: 230 MRTGLDSDEVVWSALSDMYGKCGSIEEARHIFDKMVDRDIVTWTAMIDRYFQDGRRKEGF 289
Query: 314 KVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDL 373
+F ++ SG+ P++ T GVL+AC+ + G+++ M ++ +P + + +V +
Sbjct: 290 DLFADLLRSGIRPNEFTFSGVLNACANQTSEELGKKVHGYM-TRVGFDPFSFAASALVHM 348
Query: 374 LGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
+ G + A ++ + P +PD W SL+
Sbjct: 349 YSKCGNMVSAERVFKETP-QPDLFSWTSLIAG 379
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 90/364 (24%), Positives = 160/364 (43%), Gaps = 64/364 (17%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MPER++ SW ++ GY + G++ EA +LF +MPE++ SWT M+ G++R R ++A LF
Sbjct: 131 MPERDLCSWNILISGYAKMGLLQEAKSLFDKMPERDNFSWTAMISGYVRHDRPNEALELF 190
Query: 61 DMMPEKDVVAQTNMVLG----------------------------------------YCQ 80
MM D + Y +
Sbjct: 191 RMMKRSDNSKSNKFTVSSALAAAAAVPCLRIGKEIHGYIMRTGLDSDEVVWSALSDMYGK 250
Query: 81 DGRVDEGREIFDEMPKKNVISWTTMISGYVNNNR----IDVARKLFEVMPEKNEVSWTAM 136
G ++E R IFD+M +++++WT MI Y + R D+ L NE +++ +
Sbjct: 251 CGSIEEARHIFDKMVDRDIVTWTAMIDRYFQDGRRKEGFDLFADLLRSGIRPNEFTFSGV 310
Query: 137 LMGYTQCGRIQDAWELFKAMP--MKSV------VASNSMILGLGQNGEVQKARVVFDQMR 188
L C Q + EL K + M V A+++++ + G + A VF +
Sbjct: 311 L---NACAN-QTSEELGKKVHGYMTRVGFDPFSFAASALVHMYSKCGNMVSAERVFKETP 366
Query: 189 EKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQ 248
+ D +W+ +I Y + G E I F L+ K G + + + + VLS CA +D G
Sbjct: 367 QPDLFSWTSLIAGYAQNGQPDEAIRYFELLVKSGTQPDHITFVGVLSACAHAGLVDKGLD 426
Query: 249 VHAQLVRCQFDV----DVYVASVLITMYIKCGELVKGKLIFDNFASK-DIVMWNSIISGY 303
+ ++ Q+ + D Y + +I + + G+ + + I + K D +W S++ G
Sbjct: 427 -YFHSIKEQYGLTHTADHY--ACIIDLLARSGQFDEAENIISKMSMKPDKFLWASLLGGC 483
Query: 304 AQYG 307
+G
Sbjct: 484 RIHG 487
>gi|297804490|ref|XP_002870129.1| hypothetical protein ARALYDRAFT_329829 [Arabidopsis lyrata subsp.
lyrata]
gi|297315965|gb|EFH46388.1| hypothetical protein ARALYDRAFT_329829 [Arabidopsis lyrata subsp.
lyrata]
Length = 853
Score = 475 bits (1222), Expect = e-131, Method: Compositional matrix adjust.
Identities = 248/562 (44%), Positives = 346/562 (61%), Gaps = 20/562 (3%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRD-SRIDDARRLFD 61
E + ++ V G I A ++F M KN VSW +L G +D SR+ +A +LFD
Sbjct: 58 EDQIFPLNKIIATRVRSGDIDGALSVFHGMRAKNTVSWNSLLVGISKDPSRMMEAHQLFD 117
Query: 62 MMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKL 121
+PE D + M+ Y ++G ++ + F+ MP K+ SW TMI+GY ++ AR L
Sbjct: 118 EIPEPDTFSYNIMLSCYVRNGNFEKAQSFFNRMPFKDAASWNTMITGYARRGEMEKARVL 177
Query: 122 FEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKAR 181
F M EKNEVSW AM+ GY +CG ++ A FKA P + VVA +MI G + +V+ A
Sbjct: 178 FYSMMEKNEVSWNAMISGYIECGDLEKAAHFFKAAPFRGVVAWTAMITGYMKAKKVELAE 237
Query: 182 VVFDQMR-EKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASL 240
+F M +K+ TW+ MI Y + + LF M +EG+R N L S L C+ L
Sbjct: 238 AMFKDMTVKKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSEL 297
Query: 241 ASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSII 300
++L GRQ+H I MY KCGEL +F+ KD+V WN++I
Sbjct: 298 SALCLGRQIHQ-----------------IVMYCKCGELGDAWKLFEAMKKKDVVAWNAMI 340
Query: 301 SGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLV 360
SGYAQ+G EK+L +FHEM S PD +T V VL AC++ G V G F+SM Y V
Sbjct: 341 SGYAQHGNAEKALCLFHEMRDSKTKPDWITFVAVLLACNHAGLVDIGMTYFDSMVRDYRV 400
Query: 361 EPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAK 420
EP+ +HY CMVDLLGRAG+VE+A+KLI +MPF P A ++G+LLGACR H ++LAE AA+
Sbjct: 401 EPRPDHYTCMVDLLGRAGKVEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAE 460
Query: 421 KLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFT 480
KLL+L+P+NA Y+ L+NIYAS+ + DVA +RK M++ NV+K PG SWIE+ K+H F
Sbjct: 461 KLLELDPRNAAGYVQLANIYASKNLWEDVARVRKRMKESNVVKVPGYSWIEIRNKIHHFR 520
Query: 481 GRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAY 540
D + HPE I + L+++ ++ AGY P+ F LH+V+EE+K L +HSEKLAVA+
Sbjct: 521 SSDRI-HPELDSIHKKLKELERKMKLAGYKPELEFALHNVEEEQKEKLLLWHSEKLAVAF 579
Query: 541 GLVKLPEGVPIRVMKNLRVCGD 562
G +KLP+G PI+V KNLR+C
Sbjct: 580 GCIKLPQGSPIQVFKNLRICAS 601
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 142/278 (51%), Gaps = 23/278 (8%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
+PE + S+ M+ YV G +A + F +MP K+ SW M+ G+ R ++ AR LF
Sbjct: 119 IPEPDTFSYNIMLSCYVRNGNFEKAQSFFNRMPFKDAASWNTMITGYARRGEMEKARVLF 178
Query: 61 DMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARK 120
M EK+ V+ M+ GY + G +++ F P + V++WT MI+GY+ ++++A
Sbjct: 179 YSMMEKNEVSWNAMISGYIECGDLEKAAHFFKAAPFRGVVAWTAMITGYMKAKKVELAEA 238
Query: 121 LFEVMP-EKNEVSWTAMLMGYTQCGRIQDAWELFKAM------PMKSVVASNSM------ 167
+F+ M +KN V+W AM+ GY + R +D +LF+AM P S ++S +
Sbjct: 239 MFKDMTVKKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELS 298
Query: 168 ILGLGQN----------GEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTL 217
L LG+ GE+ A +F+ M++KD W+ MI Y + G + + LF
Sbjct: 299 ALCLGRQIHQIVMYCKCGELGDAWKLFEAMKKKDVVAWNAMISGYAQHGNAEKALCLFHE 358
Query: 218 MQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVR 255
M+ + ++ + ++VL C +D G +VR
Sbjct: 359 MRDSKTKPDWITFVAVLLACNHAGLVDIGMTYFDSMVR 396
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 38/182 (20%), Positives = 74/182 (40%), Gaps = 10/182 (5%)
Query: 225 VNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVD-VYVASVLITMYIKCGELVKGKL 283
V P I V S +S S V + + D D ++ + +I ++ G++
Sbjct: 23 VENPDAILVGSCLSSTFSSPEPSLVRSDYLTKPSDEDQIFPLNKIIATRVRSGDIDGALS 82
Query: 284 IFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGK 343
+F +K+ V WNS++ G ++ + H++F PD + +LS G
Sbjct: 83 VFHGMRAKNTVSWNSLLVGISK---DPSRMMEAHQLFDEIPEPDTFSYNIMLSCYVRNGN 139
Query: 344 VKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
++ + F M K + M+ R G++E A L +M E + + W +++
Sbjct: 140 FEKAQSFFNRMPFK-----DAASWNTMITGYARRGEMEKARVLFYSM-MEKNEVSWNAMI 193
Query: 404 GA 405
Sbjct: 194 SG 195
>gi|449434268|ref|XP_004134918.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
mitochondrial-like [Cucumis sativus]
gi|449533166|ref|XP_004173548.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
mitochondrial-like [Cucumis sativus]
Length = 712
Score = 474 bits (1221), Expect = e-131, Method: Compositional matrix adjust.
Identities = 239/607 (39%), Positives = 364/607 (59%), Gaps = 8/607 (1%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MP ++++SW +M++G ++ G +T A +F +M E+NVVSWT ++ G + R++ A LF
Sbjct: 107 MPVKDLISWNSMLKGCLKCGDLTMACNMFDKMSERNVVSWTTIINGLLEFGRVEVAECLF 166
Query: 61 DMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARK 120
+MP KDV A +MV G+ +GRV++ E+F++MP +NVISWT++I G +N R A
Sbjct: 167 RVMPTKDVTAWNSMVHGFFSNGRVEDAIELFEKMPNRNVISWTSVIGGLDHNGRSFEALV 226
Query: 121 LFEVMPEKNEVSWTAMLMGYTQCGRI-------QDAWELFKAMPMKSVVASNSMILGLGQ 173
+F M + + + + T C I Q + K + S S+I
Sbjct: 227 VFHKMLASFKATSSTLACALTACANICTPFIGVQIHGLIVKTGYCFNEYISASLISFYAN 286
Query: 174 NGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISV 233
+ A +F+ ++ W+ ++ Y + + +F M + V N SL S
Sbjct: 287 CKLIDNASSIFNDNVSRNVVVWTALLTGYGLNCRHTDALQVFKGMMRMSVLPNQSSLTSA 346
Query: 234 LSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDI 293
L+ C L ++D GR+VHA + + D++V++ L+ MY KCG + G +F + K++
Sbjct: 347 LNSCCGLEAVDRGREVHAVAHKLGLESDIFVSNSLVVMYTKCGHINDGIAVFTRMSRKNV 406
Query: 294 VMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFES 353
V WNSII G AQ+G G +L +F +M + V PD++TL G+LSAC ++G + +GR F+
Sbjct: 407 VSWNSIIVGCAQHGFGRWALTLFAQMIRTRVDPDEITLAGLLSACGHSGMLTKGRCFFKH 466
Query: 354 MKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLD 413
+ +E EHY+ MVDLLGR GQ+E+A LI MP + + ++W +LL + H +
Sbjct: 467 FGKNFGIEMTNEHYSSMVDLLGRYGQLEEAEALIHIMPGKANYMVWLALLSSSINHSNVH 526
Query: 414 LAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVE 473
+AE AAK +L L+P + Y LLSN+YAS G++ +V+++RK M+ ++K PG SWI ++
Sbjct: 527 VAERAAKCVLDLQPNCSAAYTLLSNLYASTGKWTEVSKIRKKMKDEGILKQPGSSWITIK 586
Query: 474 KKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHS 533
H F D SHP I + LE +GG L+E GY PD F HDV+ E+K L YHS
Sbjct: 587 GIKHNFISGD-QSHPLSRKIYQKLEWLGGKLKELGYVPDPKFSFHDVETEQKEEMLSYHS 645
Query: 534 EKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGL 593
E+LA+ +GL+ EG I VMKNLR+CGDCH+A+KL SKV+GREI++RD +RFHHF +G
Sbjct: 646 ERLAIGFGLISTVEGSTIIVMKNLRICGDCHNAVKLTSKVVGREIVVRDPSRFHHFHNGT 705
Query: 594 CSCRDYW 600
CSC DYW
Sbjct: 706 CSCGDYW 712
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 114/394 (28%), Positives = 204/394 (51%), Gaps = 34/394 (8%)
Query: 16 YVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMV 75
++ G I EA +LF +M V +T+M+GG+ + R++DA +LF MP KD+++ +M+
Sbjct: 60 HLRNGRIDEARSLFNKMSSPGVNLYTMMIGGYADEGRLEDALKLFYEMPVKDLISWNSML 119
Query: 76 LGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTA 135
G + G + +FD+M ++NV+SWTT+I+G + R++VA LF VMP K+ +W +
Sbjct: 120 KGCLKCGDLTMACNMFDKMSERNVVSWTTIINGLLEFGRVEVAECLFRVMPTKDVTAWNS 179
Query: 136 MLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATW 195
M+ G+ GR++DA ELF+ MP ++V++ S+I GL NG +A VVF +M AT
Sbjct: 180 MVHGFFSNGRVEDAIELFEKMPNRNVISWTSVIGGLDHNGRSFEALVVFHKMLASFKATS 239
Query: 196 SGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVR 255
S +L L+ CA++ + G Q+H +V+
Sbjct: 240 S--------------------------------TLACALTACANICTPFIGVQIHGLIVK 267
Query: 256 CQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKV 315
+ + Y+++ LI+ Y C + IF++ S+++V+W ++++GY +L+V
Sbjct: 268 TGYCFNEYISASLISFYANCKLIDNASSIFNDNVSRNVVVWTALLTGYGLNCRHTDALQV 327
Query: 316 FHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLG 375
F M V+P+ +L L++C V GRE+ ++ K +E +V +
Sbjct: 328 FKGMMRMSVLPNQSSLTSALNSCCGLEAVDRGREV-HAVAHKLGLESDIFVSNSLVVMYT 386
Query: 376 RAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTH 409
+ G + D + + M + + W S++ C H
Sbjct: 387 KCGHINDGIAVFTRMS-RKNVVSWNSIIVGCAQH 419
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 85/208 (40%), Gaps = 49/208 (23%)
Query: 265 ASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGV 324
++ L++ +++ G + + + +F+ +S + ++ +I GYA G E +LK+F+EM
Sbjct: 53 SNYLLSFHLRNGRIDEARSLFNKMSSPGVNLYTMMIGGYADEGRLEDALKLFYEM----P 108
Query: 325 MPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAM 384
+ D ++ +L C G + +F+ M + +V + +++ L G+VE A
Sbjct: 109 VKDLISWNSMLKGCLKCGDLTMACNMFDKMSERNVVS-----WTTIINGLLEFGRVEVAE 163
Query: 385 KLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQG 444
L MP D W S++ + S G
Sbjct: 164 CLFRVMP-TKDVTAWNSMVHG----------------------------------FFSNG 188
Query: 445 RFHDVAELRKNMRKRNVIKPPGCSWIEV 472
R D EL + M RNVI SW V
Sbjct: 189 RVEDAIELFEKMPNRNVI-----SWTSV 211
>gi|449507535|ref|XP_004163058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g30700-like [Cucumis sativus]
Length = 788
Score = 474 bits (1220), Expect = e-131, Method: Compositional matrix adjust.
Identities = 250/645 (38%), Positives = 380/645 (58%), Gaps = 52/645 (8%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF-DMM 63
N+ +A+V Y + A +F MPE++ V W M+ GF R+S +D+ R+F DM+
Sbjct: 147 NLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVFVDML 206
Query: 64 P--------------------------------------EKDVVAQTNMVLGYCQDGRVD 85
DV T ++ Y + G+
Sbjct: 207 DVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGKSC 266
Query: 86 EGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLF-EVMPEKNEVSWTAML------- 137
+GR +FD++ + ++IS+ MISGY N+ + A LF E++ V+ + ++
Sbjct: 267 KGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRVNSSTLVGLIPVYL 326
Query: 138 -MGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWS 196
+ Q R+ L + ++ V S ++ + EVQ AR +FD+ EK A+W+
Sbjct: 327 PFNHLQLSRLIQNLSLKIGIILQPSV-STALTTVYCRLNEVQFARQLFDESPEKSLASWN 385
Query: 197 GMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRC 256
MI Y + G I LF M + + N ++ S+LS CA L +L G+ VH +
Sbjct: 386 AMISGYTQNGLTDRAISLFQEMMPQ-LSPNPVTVTSILSACAQLGALSIGKWVHGLIKSE 444
Query: 257 QFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVF 316
+ + +VYV++ L+ MY KCG +V+ + +FD K++V WN++I+GY +G G+++LK+F
Sbjct: 445 RLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMITGYGLHGHGKEALKLF 504
Query: 317 HEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGR 376
+EM SG+ P VT + +L ACS++G V EG EIF SM + Y +P +EHYACMVD+LGR
Sbjct: 505 YEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMANNYGFQPMSEHYACMVDILGR 564
Query: 377 AGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILL 436
AGQ+ +A++ IE MP EP +WG+LLGAC H ++A VA+K+L QL+P+N G Y+LL
Sbjct: 565 AGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTEMANVASKRLFQLDPENVGYYVLL 624
Query: 437 SNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRM 496
SNIY++ F A +R+ ++KR + K PGC+ IE++ + ++FT D SHP+ I M
Sbjct: 625 SNIYSTDRNFPKAASVRQVVKKRKLAKTPGCTLIEIDDQQYVFTSGD-RSHPQATAIFEM 683
Query: 497 LEKIGGLLREAGYCPDS-SFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMK 555
LEK+ G +REAGY ++ + LHDV++EEK + HSEKLA+A+GL+ G IR++K
Sbjct: 684 LEKLTGKMREAGYQAETVTTALHDVEDEEKELMVNVHSEKLAIAFGLISTKPGTEIRIIK 743
Query: 556 NLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
NLRVC DCH+A K ISK+ R I++RDANRFHHFK+G+CSC DYW
Sbjct: 744 NLRVCLDCHTATKFISKITERVIVVRDANRFHHFKNGICSCGDYW 788
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 93/378 (24%), Positives = 172/378 (45%), Gaps = 24/378 (6%)
Query: 67 DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVA-------R 119
D+ + T + + G V R++F+++ K ++ + +I G+ +N + R
Sbjct: 45 DLSSITKLTHKFFDLGAVAHVRQLFNKVSKPDLFLFNVLIRGFSDNGLPKSSIFLYTHLR 104
Query: 120 KLFEVMPEKNEVSWTAMLMGYTQCGRIQD--AWELFKAMPMKSVVASN----SMILGL-G 172
K + P+ ++ + R++D L A + VASN S I+ L
Sbjct: 105 KXTNLRPDNFTYAF-----AISAASRLEDERVGVLLHAHSIVDGVASNLFVGSAIVDLYF 159
Query: 173 QNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLIS 232
+ + AR VFD M E+D W+ MI + R Y + I +F M G+ + +L +
Sbjct: 160 KFTRAELARKVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVFVDMLDVGLSFDSTTLAT 219
Query: 233 VLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKD 292
VL+ A L G + + DVYV + LI++Y KCG+ KG+++FD D
Sbjct: 220 VLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGKSCKGRILFDQIDQPD 279
Query: 293 IVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFE 352
++ +N++ISGY E ++ +F E+ +SG + TLVG++ ++ R I
Sbjct: 280 LISYNAMISGYTFNHETESAVTLFRELLASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQN 339
Query: 353 -SMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMK 411
S+K +++P + + R +V+ A +L + P E W +++ +
Sbjct: 340 LSLKIGIILQPSVS--TALTTVYCRLNEVQFARQLFDESP-EKSLASWNAMISGYTQNGL 396
Query: 412 LDLAEVAAKKLL-QLEPK 428
D A ++++ QL P
Sbjct: 397 TDRAISLFQEMMPQLSPN 414
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 105/217 (48%), Gaps = 21/217 (9%)
Query: 2 PERNVVSWTAMVRGYVEEGMITEAGTLFWQM-PE--KNVVSWTVMLGGFIRDSRIDDARR 58
PE+++ SW AM+ GY + G+ A +LF +M P+ N V+ T +L + + +
Sbjct: 377 PEKSLASWNAMISGYTQNGLTDRAISLFQEMMPQLSPNPVTVTSILSACAQLGALSIGKW 436
Query: 59 LFDMMP----EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNR 114
+ ++ E +V T +V Y + G + E R++FD M KNV++W MI+GY +
Sbjct: 437 VHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMITGYGLHGH 496
Query: 115 IDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAM-------PMKSVVA 163
A KLF M + V++ ++L + G + + E+F +M PM A
Sbjct: 497 GKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMANNYGFQPMSEHYA 556
Query: 164 SNSMILGLGQNGEVQKARVVFDQM-REKDDATWSGMI 199
M+ LG+ G++ A ++M E A W ++
Sbjct: 557 --CMVDILGRAGQLTNALEFIERMPLEPGPAVWGALL 591
>gi|449470293|ref|XP_004152852.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Cucumis sativus]
Length = 788
Score = 474 bits (1220), Expect = e-131, Method: Compositional matrix adjust.
Identities = 250/645 (38%), Positives = 380/645 (58%), Gaps = 52/645 (8%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF-DMM 63
N+ +A+V Y + A +F MPE++ V W M+ GF R+S +D+ R+F DM+
Sbjct: 147 NLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVFVDML 206
Query: 64 P--------------------------------------EKDVVAQTNMVLGYCQDGRVD 85
DV T ++ Y + G+
Sbjct: 207 DVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGKSC 266
Query: 86 EGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLF-EVMPEKNEVSWTAML------- 137
+GR +FD++ + ++IS+ MISGY N+ + A LF E++ V+ + ++
Sbjct: 267 KGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRVNSSTLVGLIPVYL 326
Query: 138 -MGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWS 196
+ Q R+ L + ++ V S ++ + EVQ AR +FD+ EK A+W+
Sbjct: 327 PFNHLQLSRLIQNLSLKIGIILQPSV-STALTTVYCRLNEVQFARQLFDESPEKSLASWN 385
Query: 197 GMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRC 256
MI Y + G I LF M + + N ++ S+LS CA L +L G+ VH +
Sbjct: 386 AMISGYTQNGLTDRAISLFQEMMPQ-LSPNPVTVTSILSACAQLGALSIGKWVHGLIKSE 444
Query: 257 QFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVF 316
+ + +VYV++ L+ MY KCG +V+ + +FD K++V WN++I+GY +G G+++LK+F
Sbjct: 445 RLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMITGYGLHGHGKEALKLF 504
Query: 317 HEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGR 376
+EM SG+ P VT + +L ACS++G V EG EIF SM + Y +P +EHYACMVD+LGR
Sbjct: 505 YEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMANNYGFQPMSEHYACMVDILGR 564
Query: 377 AGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILL 436
AGQ+ +A++ IE MP EP +WG+LLGAC H ++A VA+K+L QL+P+N G Y+LL
Sbjct: 565 AGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTEMANVASKRLFQLDPENVGYYVLL 624
Query: 437 SNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRM 496
SNIY++ F A +R+ ++KR + K PGC+ IE++ + ++FT D SHP+ I M
Sbjct: 625 SNIYSTDRNFPKAASVRQVVKKRKLAKTPGCTLIEIDDQQYVFTSGD-RSHPQATAIFEM 683
Query: 497 LEKIGGLLREAGYCPDS-SFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMK 555
LEK+ G +REAGY ++ + LHDV++EEK + HSEKLA+A+GL+ G IR++K
Sbjct: 684 LEKLTGKMREAGYQAETVTTALHDVEDEEKELMVNVHSEKLAIAFGLISTKPGTEIRIIK 743
Query: 556 NLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
NLRVC DCH+A K ISK+ R I++RDANRFHHFK+G+CSC DYW
Sbjct: 744 NLRVCLDCHTATKFISKITERVIVVRDANRFHHFKNGICSCGDYW 788
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 92/373 (24%), Positives = 172/373 (46%), Gaps = 14/373 (3%)
Query: 67 DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMP 126
D+ + T + + G V R++F+++ K ++ + +I G+ +N + L+ +
Sbjct: 45 DLSSITKLTHKFFDLGAVAHVRQLFNKVSKPDLFLFNVLIRGFSDNGLPKSSIFLYTHLR 104
Query: 127 EKNEVSWTAMLMGY--TQCGRIQD--AWELFKAMPMKSVVASN----SMILGL-GQNGEV 177
+K + + + R++D L A + VASN S I+ L +
Sbjct: 105 KKTNLRPDNFTYAFAISAASRLEDERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRA 164
Query: 178 QKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVC 237
+ AR VFD M E+D W+ MI + R Y + I +F M G+ + +L +VL+
Sbjct: 165 ELARKVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAV 224
Query: 238 ASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWN 297
A L G + + DVYV + LI++Y KCG+ KG+++FD D++ +N
Sbjct: 225 AELQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGKSCKGRILFDQIDQPDLISYN 284
Query: 298 SIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFE-SMKS 356
++ISGY E ++ +F E+ +SG + TLVG++ ++ R I S+K
Sbjct: 285 AMISGYTFNHETESAVTLFRELLASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKI 344
Query: 357 KYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAE 416
+++P + + R +V+ A +L + P E W +++ + D A
Sbjct: 345 GIILQPSVS--TALTTVYCRLNEVQFARQLFDESP-EKSLASWNAMISGYTQNGLTDRAI 401
Query: 417 VAAKKLL-QLEPK 428
++++ QL P
Sbjct: 402 SLFQEMMPQLSPN 414
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 105/217 (48%), Gaps = 21/217 (9%)
Query: 2 PERNVVSWTAMVRGYVEEGMITEAGTLFWQM-PE--KNVVSWTVMLGGFIRDSRIDDARR 58
PE+++ SW AM+ GY + G+ A +LF +M P+ N V+ T +L + + +
Sbjct: 377 PEKSLASWNAMISGYTQNGLTDRAISLFQEMMPQLSPNPVTVTSILSACAQLGALSIGKW 436
Query: 59 LFDMMP----EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNR 114
+ ++ E +V T +V Y + G + E R++FD M KNV++W MI+GY +
Sbjct: 437 VHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMITGYGLHGH 496
Query: 115 IDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAM-------PMKSVVA 163
A KLF M + V++ ++L + G + + E+F +M PM A
Sbjct: 497 GKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMANNYGFQPMSEHYA 556
Query: 164 SNSMILGLGQNGEVQKARVVFDQM-REKDDATWSGMI 199
M+ LG+ G++ A ++M E A W ++
Sbjct: 557 --CMVDILGRAGQLTNALEFIERMPLEPGPAVWGALL 591
>gi|224066034|ref|XP_002302000.1| predicted protein [Populus trichocarpa]
gi|222843726|gb|EEE81273.1| predicted protein [Populus trichocarpa]
Length = 797
Score = 473 bits (1218), Expect = e-131, Method: Compositional matrix adjust.
Identities = 239/597 (40%), Positives = 364/597 (60%), Gaps = 23/597 (3%)
Query: 21 MITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQ 80
++ EA LF +MP ++ +SWT ++ G+++++ +D A+ + +K VA M+ GY
Sbjct: 207 LMAEARKLFDEMPNRDELSWTTIITGYVKNNDLDAAKEFLNGTSKKLGVAWNAMISGYAH 266
Query: 81 DGRVDEGREIFDEMPKKNV----ISWTTMISGYVNNNRIDVARKLFE------------- 123
G E E+F +M + ++T++IS N + +++
Sbjct: 267 RGLYLEAFEMFRKMIMSKIQLDEFTFTSVISVCANAGCFRLGKEMHAYFLKTVANPAPDV 326
Query: 124 VMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVV 183
MP N A++ Y +CG++ A E+F MP + +V+ N ++ G + +A+
Sbjct: 327 AMPVNN-----ALITFYWKCGKVDIAQEIFNKMPERDLVSWNIILSGYVNVRCMDEAKSF 381
Query: 184 FDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASL 243
F++M EK+ +W MI + G+ E + F M+ +G + + C+ L SL
Sbjct: 382 FNEMPEKNILSWIIMISGLAQIGFAEEALKFFNRMKLQGFEPCDYAFAGAIISCSVLGSL 441
Query: 244 DHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGY 303
HGRQ+HAQ+VR ++ + + LITMY +CG + +F N D + WN++I+
Sbjct: 442 KHGRQLHAQVVRYGYESSLSAGNALITMYARCGVVDAAHCLFINMPCVDAISWNAMIAAL 501
Query: 304 AQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPK 363
Q+G G +++++F EM G++PD ++ + V+SACS+ G VKEGR+ F+SM + Y V P
Sbjct: 502 GQHGQGTQAIELFEEMLKEGILPDRISFLTVISACSHAGLVKEGRKYFDSMHNVYGVNPD 561
Query: 364 TEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLL 423
EHYA ++DLL RAG+ +A +++E+MPFEP A IW +LL CR H +DL AA++L
Sbjct: 562 EEHYARIIDLLCRAGKFSEAKEVMESMPFEPGAPIWEALLAGCRIHGNIDLGIEAAERLF 621
Query: 424 QLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRD 483
+L+P++ G Y+LLSN+YA G+++D+A++RK MR R V K PGCSWIEVE KVH F D
Sbjct: 622 ELKPQHDGTYVLLSNMYAVAGQWNDMAKVRKLMRDRGVKKEPGCSWIEVENKVHSFLVGD 681
Query: 484 CVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLV 543
+HPE I LE++ +R+ GY PD+ VLHDV+ + K H L HSEKLAVAYG +
Sbjct: 682 -ANHPEVRQIYNYLEQLVLEMRKIGYVPDTKCVLHDVESDLKEHELSTHSEKLAVAYGFM 740
Query: 544 KLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
KLP G +RV KNLR+CGDCH+A K +SKV+GREI++RD RFHHF+DG CSC DYW
Sbjct: 741 KLPHGATVRVFKNLRICGDCHNAFKFMSKVVGREIVVRDGKRFHHFRDGKCSCGDYW 797
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 111/449 (24%), Positives = 194/449 (43%), Gaps = 88/449 (19%)
Query: 47 FIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMP--KKNVISWTT 104
+ + S+++ AR LFD +P+ D+VA+T ++ Y G + R+IF + P ++ + +
Sbjct: 58 YSKSSKLNYARYLFDEIPQPDIVARTTLIAAYSAAGDLKLSRKIFSDTPLGMRDSVFYNA 117
Query: 105 MISGYVNNNRIDVARKLFEVMPEKN----EVSWT-------------------------- 134
MI+ Y +N+ A +LF M N ++T
Sbjct: 118 MITAYSHNHDGHAAIELFCDMQRDNFRPDNYTFTSVLGALALVAEKEKHCQQLHCAVVKS 177
Query: 135 ----------AMLMGYTQCGR---------IQDAWELFKAMPMKSVVASNSMILGLGQNG 175
A++ Y +C + +A +LF MP + ++ ++I G +N
Sbjct: 178 GTGFVTSVLNALISSYVKCAASPSAQSSSLMAEARKLFDEMPNRDELSWTTIITGYVKNN 237
Query: 176 EVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLS 235
++ A+ + +K W+ MI Y +G LE ++F M ++++ + SV+S
Sbjct: 238 DLDAAKEFLNGTSKKLGVAWNAMISGYAHRGLYLEAFEMFRKMIMSKIQLDEFTFTSVIS 297
Query: 236 VCASLASLDHGRQVHAQLVRC----QFDVDVYVASVLITMYIKCGELVKGKLIFDNFASK 291
VCA+ G+++HA ++ DV + V + LIT Y KCG++ + IF+ +
Sbjct: 298 VCANAGCFRLGKEMHAYFLKTVANPAPDVAMPVNNALITFYWKCGKVDIAQEIFNKMPER 357
Query: 292 DIVMWNSIISGY-------------------------------AQYGLGEKSLKVFHEMF 320
D+V WN I+SGY AQ G E++LK F+ M
Sbjct: 358 DLVSWNIILSGYVNVRCMDEAKSFFNEMPEKNILSWIIMISGLAQIGFAEEALKFFNRMK 417
Query: 321 SSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQV 380
G P D G + +CS G +K GR++ + +Y E ++ + R G V
Sbjct: 418 LQGFEPCDYAFAGAIISCSVLGSLKHGRQL-HAQVVRYGYESSLSAGNALITMYARCGVV 476
Query: 381 EDAMKLIEAMPFEPDAIIWGSLLGACRTH 409
+ A L MP DAI W +++ A H
Sbjct: 477 DAAHCLFINMPC-VDAISWNAMIAALGQH 504
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 82/330 (24%), Positives = 135/330 (40%), Gaps = 82/330 (24%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MP R+ +SWT ++ GYV+ + A +K V+W M+ G+ +A +F
Sbjct: 218 MPNRDELSWTTIITGYVKNNDLDAAKEFLNGTSKKLGVAWNAMISGYAHRGLYLEAFEMF 277
Query: 61 DMM-----------------------------------------PEKDVVAQTN--MVLG 77
M P DV N ++
Sbjct: 278 RKMIMSKIQLDEFTFTSVISVCANAGCFRLGKEMHAYFLKTVANPAPDVAMPVNNALITF 337
Query: 78 YCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAML 137
Y + G+VD +EIF++MP+++++SW ++SGYVN +D A+ F MPEKN +SW M+
Sbjct: 338 YWKCGKVDIAQEIFNKMPERDLVSWNIILSGYVNVRCMDEAKSFFNEMPEKNILSWIIMI 397
Query: 138 MGYTQCGRIQDAWELFKAMPMK-------------------------------------- 159
G Q G ++A + F M ++
Sbjct: 398 SGLAQIGFAEEALKFFNRMKLQGFEPCDYAFAGAIISCSVLGSLKHGRQLHAQVVRYGYE 457
Query: 160 -SVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLM 218
S+ A N++I + G V A +F M D +W+ MI + G + I+LF M
Sbjct: 458 SSLSAGNALITMYARCGVVDAAHCLFINMPCVDAISWNAMIAALGQHGQGTQAIELFEEM 517
Query: 219 QKEGVRVNFPSLISVLSVCASLASLDHGRQ 248
KEG+ + S ++V+S C+ + GR+
Sbjct: 518 LKEGILPDRISFLTVISACSHAGLVKEGRK 547
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 135/295 (45%), Gaps = 23/295 (7%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MPER++VSW ++ GYV + EA + F +MPEKN++SW +M+ G + ++A + F
Sbjct: 354 MPERDLVSWNIILSGYVNVRCMDEAKSFFNEMPEKNILSWIIMISGLAQIGFAEEALKFF 413
Query: 61 DMMP----EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPK----KNVISWTTMISGYVNN 112
+ M E A ++ G + GR++ ++ + ++ + +I+ Y
Sbjct: 414 NRMKLQGFEPCDYAFAGAIISCSVLGSLKHGRQLHAQVVRYGYESSLSAGNALITMYARC 473
Query: 113 NRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASN----SMI 168
+D A LF MP + +SW AM+ Q G+ A ELF+ M + ++ ++I
Sbjct: 474 GVVDAAHCLFINMPCVDAISWNAMIAALGQHGQGTQAIELFEEMLKEGILPDRISFLTVI 533
Query: 169 LGLGQNGEVQKARVVFDQMR-----EKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGV 223
G V++ R FD M D+ ++ +I + R G E ++ M E
Sbjct: 534 SACSHAGLVKEGRKYFDSMHNVYGVNPDEEHYARIIDLLCRAGKFSEAKEVMESMPFEP- 592
Query: 224 RVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVD-VYVASVLITMYIKCGE 277
P ++L+ C ++D G + +L + D YV +L MY G+
Sbjct: 593 --GAPIWEALLAGCRIHGNIDLGIEAAERLFELKPQHDGTYV--LLSNMYAVAGQ 643
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/337 (22%), Positives = 141/337 (41%), Gaps = 54/337 (16%)
Query: 140 YTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQ--MREKDDATWSG 197
Y++ ++ A LF +P +VA ++I G+++ +R +F + +D ++
Sbjct: 58 YSKSSKLNYARYLFDEIPQPDIVARTTLIAAYSAAGDLKLSRKIFSDTPLGMRDSVFYNA 117
Query: 198 MIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLD-HGRQVHAQLVRC 256
MI Y I+LF MQ++ R + + SVL A +A + H +Q+H +V+
Sbjct: 118 MITAYSHNHDGHAAIELFCDMQRDNFRPDNYTFTSVLGALALVAEKEKHCQQLHCAVVKS 177
Query: 257 QFDVDVYVASVLITMYIKCGE---------LVKGKLIFDNFASKDI-------------- 293
V + LI+ Y+KC + + + +FD ++D
Sbjct: 178 GTGFVTSVLNALISSYVKCAASPSAQSSSLMAEARKLFDEMPNRDELSWTTIITGYVKNN 237
Query: 294 -----------------VMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLS 336
V WN++ISGYA GL ++ ++F +M S + D+ T V+S
Sbjct: 238 DLDAAKEFLNGTSKKLGVAWNAMISGYAHRGLYLEAFEMFRKMIMSKIQLDEFTFTSVIS 297
Query: 337 ACSYTGKVKEGREIFESMKSKYLVEPKTEHY----ACMVDLLGRAGQVEDAMKLIEAMPF 392
C+ G + G+E+ + K + P + ++ + G+V+ A ++ MP
Sbjct: 298 VCANAGCFRLGKEM-HAYFLKTVANPAPDVAMPVNNALITFYWKCGKVDIAQEIFNKMP- 355
Query: 393 EPDAIIWGSLLGA-----CRTHMKLDLAEVAAKKLLQ 424
E D + W +L C K E+ K +L
Sbjct: 356 ERDLVSWNIILSGYVNVRCMDEAKSFFNEMPEKNILS 392
Score = 45.4 bits (106), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 59/126 (46%), Gaps = 4/126 (3%)
Query: 232 SVLSVCA--SLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFA 289
S+L +C S S R VHA ++ F ++ + LI +Y K +L + +FD
Sbjct: 16 SLLQICCLQSPISYSLARPVHAHMIASGFQPRGHILNRLIDIYSKSSKLNYARYLFDEIP 75
Query: 290 SKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGRE 349
DIV ++I+ Y+ G + S K+F + + M D V +++A S+ E
Sbjct: 76 QPDIVARTTLIAAYSAAGDLKLSRKIFSD--TPLGMRDSVFYNAMITAYSHNHDGHAAIE 133
Query: 350 IFESMK 355
+F M+
Sbjct: 134 LFCDMQ 139
>gi|356561853|ref|XP_003549191.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Glycine max]
Length = 748
Score = 473 bits (1217), Expect = e-130, Method: Compositional matrix adjust.
Identities = 248/602 (41%), Positives = 366/602 (60%), Gaps = 50/602 (8%)
Query: 47 FIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMP----KKNVISW 102
+++ RI DAR+LFD MP++DVV + M+ GY + G V+E +E+F EM + N++SW
Sbjct: 149 YLKCDRILDARKLFDRMPDRDVVVWSAMIAGYSRLGLVEEAKELFGEMRSGGVEPNLVSW 208
Query: 103 TTMISGYVNNNRIDVARKLFEVM------PEKNEVSW----------------------- 133
M++G+ NN D A +F +M P+ + VS
Sbjct: 209 NGMLAGFGNNGFYDEAVGMFRMMLVQGFWPDGSTVSCVLPAVGCLEDVVVGAQVHGYVIK 268
Query: 134 ----------TAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVV 183
+AML Y +CG +++ +F + + + N+ + GL +NG V A V
Sbjct: 269 QGLGSDKFVVSAMLDMYGKCGCVKEMSRVFDEVEEMEIGSLNAFLTGLSRNGMVDTALEV 328
Query: 184 F----DQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCAS 239
F DQ E + TW+ +I + G +LE ++LF MQ GV N ++ S++ C +
Sbjct: 329 FNKFKDQKMELNVVTWTSIIASCSQNGKDLEALELFRDMQAYGVEPNAVTIPSLIPACGN 388
Query: 240 LASLDHGRQVHA-QLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNS 298
+++L HG+++H L R FD DVYV S LI MY KCG + + FD ++ ++V WN+
Sbjct: 389 ISALMHGKEIHCFSLRRGIFD-DVYVGSALIDMYAKCGRIQLARRCFDKMSALNLVSWNA 447
Query: 299 IISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKY 358
++ GYA +G ++++++FH M SG PD VT VLSAC+ G +EG + SM ++
Sbjct: 448 VMKGYAMHGKAKETMEMFHMMLQSGQKPDLVTFTCVLSACAQNGLTEEGWRCYNSMSEEH 507
Query: 359 LVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVA 418
+EPK EHYAC+V LL R G++E+A +I+ MPFEPDA +WG+LL +CR H L L E+A
Sbjct: 508 GIEPKMEHYACLVTLLSRVGKLEEAYSIIKEMPFEPDACVWGALLSSCRVHNNLSLGEIA 567
Query: 419 AKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHM 478
A+KL LEP N G YILLSNIYAS+G + + +R+ M+ + + K PG SWIEV KVHM
Sbjct: 568 AEKLFFLEPTNPGNYILLSNIYASKGLWDEENRIREVMKSKGLRKNPGYSWIEVGHKVHM 627
Query: 479 FTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAV 538
D SHP+ I+ L+K+ ++++GY P ++FVL DV+E++K L HSEKLAV
Sbjct: 628 LLAGD-QSHPQMKDILEKLDKLNMQMKKSGYLPKTNFVLQDVEEQDKEQILCGHSEKLAV 686
Query: 539 AYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRD 598
GL+ G P++V+KNLR+C DCH+ IK+IS++ GREI +RD NRFHHFKDG+CSC D
Sbjct: 687 VLGLLNTSPGQPLQVIKNLRICDDCHAVIKVISRLEGREIYVRDTNRFHHFKDGVCSCGD 746
Query: 599 YW 600
+W
Sbjct: 747 FW 748
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 109/451 (24%), Positives = 182/451 (40%), Gaps = 97/451 (21%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMP----EKNVVSWTVMLGGFIRDSRIDDA 56
MP+R+VV W+AM+ GY G++ EA LF +M E N+VSW ML GF + D+A
Sbjct: 165 MPDRDVVVWSAMIAGYSRLGLVEEAKELFGEMRSGGVEPNLVSWNGMLAGFGNNGFYDEA 224
Query: 57 RRLFDMM------PEKDVVAQTNMVLGYCQD----------------------------- 81
+F MM P+ V+ +G +D
Sbjct: 225 VGMFRMMLVQGFWPDGSTVSCVLPAVGCLEDVVVGAQVHGYVIKQGLGSDKFVVSAMLDM 284
Query: 82 ----GRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEK----NEVSW 133
G V E +FDE+ + + S ++G N +D A ++F ++ N V+W
Sbjct: 285 YGKCGCVKEMSRVFDEVEEMEIGSLNAFLTGLSRNGMVDTALEVFNKFKDQKMELNVVTW 344
Query: 134 TAMLMGYTQCGRIQDAWELFKAMPMKSV----VASNSMILGLG----------------- 172
T+++ +Q G+ +A ELF+ M V V S+I G
Sbjct: 345 TSIIASCSQNGKDLEALELFRDMQAYGVEPNAVTIPSLIPACGNISALMHGKEIHCFSLR 404
Query: 173 ------------------QNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDL 214
+ G +Q AR FD+M + +W+ ++K Y G E +++
Sbjct: 405 RGIFDDVYVGSALIDMYAKCGRIQLARRCFDKMSALNLVSWNAVMKGYAMHGKAKETMEM 464
Query: 215 FTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQ-FDVDVYVASVLITMYI 273
F +M + G + + + VLS CA + G + + + + + + L+T+
Sbjct: 465 FHMMLQSGQKPDLVTFTCVLSACAQNGLTEEGWRCYNSMSEEHGIEPKMEHYACLVTLLS 524
Query: 274 KCGELVKGKLIFDNFA-SKDIVMWNSIISG---YAQYGLGE-KSLKVFHEMFSSGVMPDD 328
+ G+L + I D +W +++S + LGE + K+F F P +
Sbjct: 525 RVGKLEEAYSIIKEMPFEPDACVWGALLSSCRVHNNLSLGEIAAEKLF---FLEPTNPGN 581
Query: 329 VTLVGVLSACSYTGKVKEGREIFESMKSKYL 359
L+ + A G E I E MKSK L
Sbjct: 582 YILLSNIYASK--GLWDEENRIREVMKSKGL 610
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 89/161 (55%)
Query: 194 TWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQL 253
++S +I + R + V+ F+ + + + L S + CASL +LD G+Q+HA
Sbjct: 71 SFSSLIHAFARSHHFPHVLTTFSHLHPLRLIPDAFLLPSAIKSCASLRALDPGQQLHAFA 130
Query: 254 VRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSL 313
F D VAS L MY+KC ++ + +FD +D+V+W+++I+GY++ GL E++
Sbjct: 131 AASGFLTDSIVASSLTHMYLKCDRILDARKLFDRMPDRDVVVWSAMIAGYSRLGLVEEAK 190
Query: 314 KVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESM 354
++F EM S GV P+ V+ G+L+ G E +F M
Sbjct: 191 ELFGEMRSGGVEPNLVSWNGMLAGFGNNGFYDEAVGMFRMM 231
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/212 (19%), Positives = 92/212 (43%), Gaps = 12/212 (5%)
Query: 230 LISVLSVC--ASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKL---I 284
+ LS C +S ASL RQ HA ++R D + + L++ Y L +L +
Sbjct: 1 MFHALSQCLSSSTASLSQARQAHALILRLNLFSDTQLTTSLLSFYANALSLSTPQLSLTL 60
Query: 285 FDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKV 344
+ + ++S+I +A+ L F + ++PD L + +C+ +
Sbjct: 61 SSHLPHPTLFSFSSLIHAFARSHHFPHVLTTFSHLHPLRLIPDAFLLPSAIKSCASLRAL 120
Query: 345 KEGREIFE-SMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
G+++ + S +L + + + + + ++ DA KL + MP + D ++W +++
Sbjct: 121 DPGQQLHAFAAASGFLTDSIVA--SSLTHMYLKCDRILDARKLFDRMP-DRDVVVWSAMI 177
Query: 404 GACRTHMKLDLAEVAAKKLLQLEPKNAGPYIL 435
+ +L L E A + ++ P ++
Sbjct: 178 AG---YSRLGLVEEAKELFGEMRSGGVEPNLV 206
>gi|449487256|ref|XP_004157540.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Cucumis sativus]
Length = 782
Score = 472 bits (1215), Expect = e-130, Method: Compositional matrix adjust.
Identities = 255/713 (35%), Positives = 393/713 (55%), Gaps = 114/713 (15%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MP ++ SW ++ GY ++G + L ++MP+ + VSWT ++ G+ + D+A +F
Sbjct: 71 MPLKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMF 130
Query: 61 -DMMPEKDVVAQ---TNMVLGYCQDGRVDEGREI-------------------------- 90
M+ E+ +Q +N++ + +D GR+I
Sbjct: 131 AKMISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKC 190
Query: 91 ---------FDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYT 141
FD M KN+ +W +IS Y+ + + ++A FE MP+++ VSW +M+ GY+
Sbjct: 191 GDPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYS 250
Query: 142 QCGRIQDAWELFKAM-------PMKSVVAS------------------------------ 164
Q G +A +F M P +AS
Sbjct: 251 QQGYNLEALAIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSG 310
Query: 165 ---NSMILGLGQNGEVQKARVV---------------------------------FDQMR 188
N++I ++G V+ AR++ F+++R
Sbjct: 311 AVGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLR 370
Query: 189 EKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQ 248
++D W+ MI Y + G + ++LF LM EG N +L ++LSV +SL L+HG+Q
Sbjct: 371 DRDVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQ 430
Query: 249 VHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFD-NFASKDIVMWNSIISGYAQYG 307
+HA ++ V + LI MY K G + K +FD K+IV W S+I AQ+G
Sbjct: 431 IHASAIKAGESSTPSVTNALIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIMALAQHG 490
Query: 308 LGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHY 367
LG++++ +F M S G+ PD +T VGVLSAC++ G V++GR+ + M + +EP HY
Sbjct: 491 LGKEAINLFERMLSVGMKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHY 550
Query: 368 ACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEP 427
ACM+DL GRAG +++A IE+MP EPD I WGSLL +C+ H DLA+VAA++LL ++P
Sbjct: 551 ACMIDLYGRAGLLQEAYLFIESMPIEPDNIAWGSLLASCKIHKNADLAKVAAERLLLIDP 610
Query: 428 KNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSH 487
N+G Y+ L+N+Y++ G++ + A+ RK M+ R V K G SWI ++ +VH F D + H
Sbjct: 611 GNSGAYLALANVYSACGKWENAAQTRKLMKDRGVRKEKGISWIHIKNEVHAFGVEDVI-H 669
Query: 488 PEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPE 547
P+ I +++ +I +++ G+ PD+ VLHD++EE K L+YHSEKLA+A+GL+ PE
Sbjct: 670 PQKDEIYKLMAEIWEEIKKMGFIPDTESVLHDLEEEVKEQILKYHSEKLAIAFGLLNTPE 729
Query: 548 GVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
+R+MKNLRVC DCHSAIK ISK++GREII+RDA RFHHFKDG CSCRDYW
Sbjct: 730 NTALRIMKNLRVCNDCHSAIKFISKLVGREIIVRDATRFHHFKDGSCSCRDYW 782
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 113/437 (25%), Positives = 212/437 (48%), Gaps = 45/437 (10%)
Query: 16 YVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMV 75
Y + G + A +F +MP K+ SW ++ G+ + + +RRL MP+ D V+ T ++
Sbjct: 55 YAKTGSLRFAHHVFDEMPLKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAII 114
Query: 76 LGYCQDGRVDEGREIFDEMPKKNV----ISWTTMISGYVNNNRIDVARKLFEVMPEKNEV 131
+GY Q G D +F +M + V + + ++S N +D+ RK+ + +
Sbjct: 115 VGYNQFGLFDNAIWMFAKMISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLG 174
Query: 132 S----WTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQM 187
S T++L Y +CG A +F M +K++ N++I Q+G+ + A F++M
Sbjct: 175 SCVPVATSLLNMYAKCGDPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKM 234
Query: 188 REKDDATWSGMIKVYERKGYELEVIDLFTLMQKE-GVRVNFPSLISVLSVCASLASLDHG 246
++D +W+ MI Y ++GY LE + +F+ M E ++ + +L S+LS CA+L L+ G
Sbjct: 235 PDRDIVSWNSMISGYSQQGYNLEALAIFSKMLNEPSLKPDNFTLASILSACANLEKLNIG 294
Query: 247 RQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKL----------------------- 283
+Q+HA ++R + + V + LI+MY K G + +L
Sbjct: 295 KQIHAYILRAETETSGAVGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYT 354
Query: 284 ----------IFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVG 333
IF+ +D+V W ++I GY Q GL +L++F M + G P+ TL
Sbjct: 355 KLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAA 414
Query: 334 VLSACSYTGKVKEGREIFES-MKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPF 392
+LS S ++ G++I S +K+ P + ++ + + G + A ++ +
Sbjct: 415 MLSVSSSLTILEHGKQIHASAIKAGESSTPSVTN--ALIAMYAKTGNINVAKRVFDLPNG 472
Query: 393 EPDAIIWGSLLGACRTH 409
+ + + W S++ A H
Sbjct: 473 KKEIVSWTSMIMALAQH 489
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 105/411 (25%), Positives = 180/411 (43%), Gaps = 80/411 (19%)
Query: 87 GREIFDEMPKKN----VISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQ 142
GR + ++ KK V +++ Y + A +F+ MP K+ SW ++ GY +
Sbjct: 29 GRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDEMPLKSTFSWNTLISGYAK 88
Query: 143 CGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVY 202
G + + L MP V+ ++I+G Q G +F D+A W
Sbjct: 89 QGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFG-------LF------DNAIW------- 128
Query: 203 ERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDV 262
+F M E V + ++ +VLS CA+ +LD GR++H+ +V+ V
Sbjct: 129 -----------MFAKMISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCV 177
Query: 263 YVASVLITMYIKCGELVKGKLIFDNFASK------------------------------- 291
VA+ L+ MY KCG+ V K++FD K
Sbjct: 178 PVATSLLNMYAKCGDPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDR 237
Query: 292 DIVMWNSIISGYAQYGLGEKSLKVFHEMFSS-GVMPDDVTLVGVLSACSYTGKVKEGREI 350
DIV WNS+ISGY+Q G ++L +F +M + + PD+ TL +LSAC+ K+ G++I
Sbjct: 238 DIVSWNSMISGYSQQGYNLEALAIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQI 297
Query: 351 FESMKSKYLVEPKTEHYA----CMVDLLGRAGQVEDAMKLIE-AMPFEPDAIIWGSLLGA 405
Y++ +TE ++ + ++G VE A ++E + I + SLL
Sbjct: 298 -----HAYILRAETETSGAVGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDG 352
Query: 406 CRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNM 456
+ KL + A + +L ++ + + Y G ++D EL + M
Sbjct: 353 ---YTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQNGLWNDALELFRLM 400
>gi|225450539|ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 808
Score = 472 bits (1215), Expect = e-130, Method: Compositional matrix adjust.
Identities = 252/637 (39%), Positives = 378/637 (59%), Gaps = 40/637 (6%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDM 62
+ +V ++ Y G + +A LF + P + VSW +L G+++ +++A+ +FD
Sbjct: 173 DSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSWNSILAGYVKKGDVEEAKLIFDQ 232
Query: 63 MPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLF 122
MP++++VA +M++ + G+V E ++F+EM +K+++SW+ +ISGY N + A +F
Sbjct: 233 MPQRNIVASNSMIVLLGKMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMF 292
Query: 123 EVMPEK----NEVSWTAML---------------------MG--------------YTQC 143
M +EV ++L MG Y+
Sbjct: 293 IEMNANGMRLDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYSGS 352
Query: 144 GRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYE 203
G I DA +LF ++ NSMI G + G V+KAR +FD M EKD +WS +I Y
Sbjct: 353 GEIMDAQKLFNGSHNLDQISWNSMISGCMKCGSVEKARALFDVMPEKDIVSWSAVISGYA 412
Query: 204 RKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVY 263
+ E + LF MQ +R + L+SV+S C LA+LD G+ VHA + + V+V
Sbjct: 413 QHDCFSETLALFHEMQLGQIRPDETILVSVISACTHLAALDQGKWVHAYIRKNGLKVNVI 472
Query: 264 VASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSG 323
+ + L+ MY+KCG + +F+ K + WN++I G A GL E+SL +F EM ++G
Sbjct: 473 LGTTLLDMYMKCGCVENALEVFNGMEEKGVSSWNALIIGLAVNGLVERSLDMFSEMKNNG 532
Query: 324 VMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDA 383
V+P+++T +GVL AC + G V EGR F SM K+ +EP +HY CMVDLLGRAG + +A
Sbjct: 533 VIPNEITFMGVLGACRHMGLVDEGRCHFASMIEKHGIEPNVKHYGCMVDLLGRAGLLNEA 592
Query: 384 MKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQ 443
KLIE+MP PD WG+LLGAC+ H ++ E +KL++L+P + G ++LLSNI+AS+
Sbjct: 593 EKLIESMPMAPDVATWGALLGACKKHGDTEMGERVGRKLIELQPDHDGFHVLLSNIFASK 652
Query: 444 GRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGL 503
G + DV E+R M+++ V+K PGCS IE VH F D +HP + ML ++
Sbjct: 653 GDWEDVLEVRGMMKQQGVVKTPGCSLIEANGVVHEFLAGD-KTHPWINKVEGMLNEMAKR 711
Query: 504 LREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDC 563
L+ GY PD++ V D+DEEEK +L HSEKLA+A+GL+ + PIR+MKNLR+C DC
Sbjct: 712 LKMEGYAPDTNEVSLDIDEEEKETTLFRHSEKLAIAFGLLTISPPTPIRIMKNLRICNDC 771
Query: 564 HSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
H+A KLISK REI++RD +RFH+FK+G CSC DYW
Sbjct: 772 HTAAKLISKAYAREIVVRDRHRFHYFKEGACSCMDYW 808
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 117/415 (28%), Positives = 211/415 (50%), Gaps = 41/415 (9%)
Query: 28 LFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQT---NMVLGYCQDGRV 84
+F ++ N W M+ +I+ + + A L+ +M + +V +V+ C +
Sbjct: 97 IFDRIENSNGFMWNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQACAVRLL 156
Query: 85 D-EGREIFDEMPK----KNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMG 139
+ G+EI D + K +V T+I+ Y + ARKLF+ P + VSW ++L G
Sbjct: 157 EFGGKEIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSWNSILAG 216
Query: 140 YTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMI 199
Y + G +++A +F MP +++VASNSMI+ LG+ G+V +A +F++M EKD +WS +I
Sbjct: 217 YVKKGDVEEAKLIFDQMPQRNIVASNSMIVLLGKMGQVMEAWKLFNEMDEKDMVSWSALI 276
Query: 200 KVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFD 259
YE+ G E + +F M G+R++ ++SVLS CA L+ + G+ +H ++R +
Sbjct: 277 SGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIE 336
Query: 260 VDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNS--------------------- 298
V + + LI MY GE++ + +F+ + D + WNS
Sbjct: 337 SYVNLQNALIHMYSGSGEIMDAQKLFNGSHNLDQISWNSMISGCMKCGSVEKARALFDVM 396
Query: 299 ----------IISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGR 348
+ISGYAQ+ ++L +FHEM + PD+ LV V+SAC++ + +G+
Sbjct: 397 PEKDIVSWSAVISGYAQHDCFSETLALFHEMQLGQIRPDETILVSVISACTHLAALDQGK 456
Query: 349 EIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
+ ++ L + ++D+ + G VE+A+++ M E W +L+
Sbjct: 457 WVHAYIRKNGL-KVNVILGTTLLDMYMKCGCVENALEVFNGME-EKGVSSWNALI 509
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 92/394 (23%), Positives = 169/394 (42%), Gaps = 83/394 (21%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MP+RN+V+ +M+ + G + EA LF +M EK++VSW+ ++ G+ ++ ++A +F
Sbjct: 233 MPQRNIVASNSMIVLLGKMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMF 292
Query: 61 DMMP---------------------------------------EKDVVAQTNMVLGYCQD 81
M E V Q ++ Y
Sbjct: 293 IEMNANGMRLDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYSGS 352
Query: 82 GRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYT 141
G + + +++F+ + ISW +MISG + ++ AR LF+VMPEK+ VSW+A++ GY
Sbjct: 353 GEIMDAQKLFNGSHNLDQISWNSMISGCMKCGSVEKARALFDVMPEKDIVSWSAVISGYA 412
Query: 142 QCGRIQDAWELFKAMPMK----------SVVASNSMILGLGQN----------------- 174
Q + LF M + SV+++ + + L Q
Sbjct: 413 QHDCFSETLALFHEMQLGQIRPDETILVSVISACTHLAALDQGKWVHAYIRKNGLKVNVI 472
Query: 175 ------------GEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEG 222
G V+ A VF+ M EK ++W+ +I G +D+F+ M+ G
Sbjct: 473 LGTTLLDMYMKCGCVENALEVFNGMEEKGVSSWNALIIGLAVNGLVERSLDMFSEMKNNG 532
Query: 223 VRVNFPSLISVLSVCASLASLDHGRQVHAQLV-RCQFDVDVYVASVLITMYIKCGELVKG 281
V N + + VL C + +D GR A ++ + + +V ++ + + G L +
Sbjct: 533 VIPNEITFMGVLGACRHMGLVDEGRCHFASMIEKHGIEPNVKHYGCMVDLLGRAGLLNEA 592
Query: 282 -KLIFDNFASKDIVMWNSIISGYAQYG---LGEK 311
KLI + D+ W +++ ++G +GE+
Sbjct: 593 EKLIESMPMAPDVATWGALLGACKKHGDTEMGER 626
Score = 42.4 bits (98), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 63/143 (44%), Gaps = 14/143 (9%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSR----IDDA 56
M E+ V SW A++ G G++ + +F +M V+ + G + R +D+
Sbjct: 497 MEEKGVSSWNALIIGLAVNGLVERSLDMFSEMKNNGVIPNEITFMGVLGACRHMGLVDEG 556
Query: 57 RRLFDMMPEK-----DVVAQTNMVLGYCQDGRVDEGREIFDEMP-KKNVISWTTMISGYV 110
R F M EK +V MV + G ++E ++ + MP +V +W ++
Sbjct: 557 RCHFASMIEKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIESMPMAPDVATWGALLGACK 616
Query: 111 NNNRID----VARKLFEVMPEKN 129
+ + V RKL E+ P+ +
Sbjct: 617 KHGDTEMGERVGRKLIELQPDHD 639
>gi|449469198|ref|XP_004152308.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Cucumis sativus]
gi|449484855|ref|XP_004156999.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Cucumis sativus]
Length = 724
Score = 471 bits (1211), Expect = e-130, Method: Compositional matrix adjust.
Identities = 231/563 (41%), Positives = 334/563 (59%), Gaps = 41/563 (7%)
Query: 78 YCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAML 137
Y + G + + ++FDEM +++ SW MISGYV + AR LF+ MP ++ SWTA++
Sbjct: 163 YAKCGSLVDAEKVFDEMVHRDLCSWNIMISGYVKGGNFEKARNLFDKMPNRDNFSWTAII 222
Query: 138 MGYTQCGRIQDAWELFKAMPMKSVVASNS--------------------------MILGL 171
G Q R ++A EL++ M SN M +GL
Sbjct: 223 SGCVQHNRPEEALELYRLMQKHDYSKSNKCTISSALAASAAIPSLHMGKKIHGHIMRMGL 282
Query: 172 --------------GQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTL 217
G+ G +++AR +FD+M E+D +W+ MI Y + G E LF
Sbjct: 283 DSDEVVWCSLLDMYGKCGSIEEARYIFDKMEERDVVSWTTMIHTYLKNGRREEGFALFRH 342
Query: 218 MQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGE 277
+ + N + VL+ CA LA+ D G+Q+HA +VR FD AS L+ MY KCG+
Sbjct: 343 LMNSNIMPNDFTFAGVLNACADLAAEDLGKQIHAYMVRVGFDSFSSAASALVHMYSKCGD 402
Query: 278 LVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSA 337
+ K +F+ D+ W S++ GYAQ+G +K+L F + SG PD + +GVLSA
Sbjct: 403 IENAKSVFEILPQPDLFSWTSLLVGYAQHGQHDKALHFFELLLKSGTKPDGIAFIGVLSA 462
Query: 338 CSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAI 397
C++ G V +G E F S+K K+ + +HYAC++DLL RAGQ +A +I MP +PD
Sbjct: 463 CAHAGLVDKGLEYFHSIKEKHGLTRTIDHYACIIDLLARAGQFTEAESIINEMPIKPDKY 522
Query: 398 IWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMR 457
IW +LLG CR H L+LA+ AAK L ++EP+N Y+ L+NIYAS G + A +R+ M
Sbjct: 523 IWAALLGGCRIHGNLELAKRAAKSLFEIEPENPATYVTLANIYASAGMRAEEANIRETMD 582
Query: 458 KRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVL 517
R ++K PG SWIE+ ++VH+F+ D SHP+ I+ L ++ ++E GY PD++FVL
Sbjct: 583 SRGIVKKPGMSWIEIRREVHVFSVGD-NSHPKSKEILEYLSELSKRMKEVGYVPDTNFVL 641
Query: 518 HDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGRE 577
HDV+ E+K +L YHSEKLAVA+G++ P G PI+V KNLR C DCH+AIK IS + GR+
Sbjct: 642 HDVELEQKEENLSYHSEKLAVAFGIISTPSGTPIKVFKNLRTCVDCHNAIKFISNITGRK 701
Query: 578 IILRDANRFHHFKDGLCSCRDYW 600
II+RD+NRFH F+ G CSC+DYW
Sbjct: 702 IIVRDSNRFHCFEGGSCSCKDYW 724
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 95/415 (22%), Positives = 186/415 (44%), Gaps = 59/415 (14%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
M R++ SW M+ GYV+ G +A LF +MP ++ SWT ++ G ++ +R ++A L+
Sbjct: 179 MVHRDLCSWNIMISGYVKGGNFEKARNLFDKMPNRDNFSWTAIISGCVQHNRPEEALELY 238
Query: 61 DMMPEKDVVAQTN--------------------------MVLG--------------YCQ 80
+M + D M +G Y +
Sbjct: 239 RLMQKHDYSKSNKCTISSALAASAAIPSLHMGKKIHGHIMRMGLDSDEVVWCSLLDMYGK 298
Query: 81 DGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLF------EVMPEKNEVSWT 134
G ++E R IFD+M +++V+SWTTMI Y+ N R + LF +MP N+ ++
Sbjct: 299 CGSIEEARYIFDKMEERDVVSWTTMIHTYLKNGRREEGFALFRHLMNSNIMP--NDFTFA 356
Query: 135 AML-----MGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMRE 189
+L + G+ A+ + S AS +++ + G+++ A+ VF+ + +
Sbjct: 357 GVLNACADLAAEDLGKQIHAYMVRVGFDSFSSAAS-ALVHMYSKCGDIENAKSVFEILPQ 415
Query: 190 KDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQ- 248
D +W+ ++ Y + G + + F L+ K G + + + I VLS CA +D G +
Sbjct: 416 PDLFSWTSLLVGYAQHGQHDKALHFFELLLKSGTKPDGIAFIGVLSACAHAGLVDKGLEY 475
Query: 249 VHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASK-DIVMWNSIISGYAQYG 307
H+ + + + +I + + G+ + + I + K D +W +++ G +G
Sbjct: 476 FHSIKEKHGLTRTIDHYACIIDLLARAGQFTEAESIINEMPIKPDKYIWAALLGGCRIHG 535
Query: 308 LGEKSLKVFHEMFSSGVMPDD-VTLVGVLSACSYTGKVKEGREIFESMKSKYLVE 361
E + + +F + P++ T V + + + G E I E+M S+ +V+
Sbjct: 536 NLELAKRAAKSLFE--IEPENPATYVTLANIYASAGMRAEEANIRETMDSRGIVK 588
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 134/284 (47%), Gaps = 34/284 (11%)
Query: 164 SNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKG-YEL------------- 209
SN ++ + G + A VFD+M +D +W+ MI Y + G +E
Sbjct: 156 SNRLLDMYAKCGSLVDAEKVFDEMVHRDLCSWNIMISGYVKGGNFEKARNLFDKMPNRDN 215
Query: 210 -----------------EVIDLFTLMQKEGV-RVNFPSLISVLSVCASLASLDHGRQVHA 251
E ++L+ LMQK + N ++ S L+ A++ SL G+++H
Sbjct: 216 FSWTAIISGCVQHNRPEEALELYRLMQKHDYSKSNKCTISSALAASAAIPSLHMGKKIHG 275
Query: 252 QLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEK 311
++R D D V L+ MY KCG + + + IFD +D+V W ++I Y + G E+
Sbjct: 276 HIMRMGLDSDEVVWCSLLDMYGKCGSIEEARYIFDKMEERDVVSWTTMIHTYLKNGRREE 335
Query: 312 SLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMV 371
+F + +S +MP+D T GVL+AC+ G++I M + + + + +V
Sbjct: 336 GFALFRHLMNSNIMPNDFTFAGVLNACADLAAEDLGKQIHAYM-VRVGFDSFSSAASALV 394
Query: 372 DLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLA 415
+ + G +E+A + E +P +PD W SLL H + D A
Sbjct: 395 HMYSKCGDIENAKSVFEILP-QPDLFSWTSLLVGYAQHGQHDKA 437
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 111/242 (45%), Gaps = 25/242 (10%)
Query: 231 ISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFAS 290
+++L C +L G+QVHA ++ + +Y+++ L+ MY KCG LV + +FD
Sbjct: 123 LTLLKFCLKQRALKEGKQVHAH-IKTSGSIGLYISNRLLDMYAKCGSLVDAEKVFDEMVH 181
Query: 291 KDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREI 350
+D+ WN +ISGY + G EK+ +F +M + D+ + ++S C + +E E+
Sbjct: 182 RDLCSWNIMISGYVKGGNFEKARNLFDKMPNR----DNFSWTAIISGCVQHNRPEEALEL 237
Query: 351 FESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKL-------IEAMPFEPDAIIWGSLL 403
+ M+ ++ C + A ++ + I M + D ++W SLL
Sbjct: 238 YRLMQK----HDYSKSNKCTISSALAASAAIPSLHMGKKIHGHIMRMGLDSDEVVWCSLL 293
Query: 404 ---GACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRN 460
G C + E A ++E ++ + + + Y GR + L +++ N
Sbjct: 294 DMYGKCGS------IEEARYIFDKMEERDVVSWTTMIHTYLKNGRREEGFALFRHLMNSN 347
Query: 461 VI 462
++
Sbjct: 348 IM 349
>gi|225459736|ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
[Vitis vinifera]
Length = 758
Score = 471 bits (1211), Expect = e-130, Method: Compositional matrix adjust.
Identities = 242/601 (40%), Positives = 357/601 (59%), Gaps = 48/601 (7%)
Query: 47 FIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMP----KKNVISW 102
+I+ ++I DA R+FD M E DVV+ + +V Y + G VDE + +F EM + N+ISW
Sbjct: 159 YIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEMGDSGVQPNLISW 218
Query: 103 TTMISGYVNNNRIDVARKLFEVM------PEKNEVSW----------------------- 133
MI+G+ ++ A +F M P+ +S
Sbjct: 219 NGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDLEDLVMGILIHGYVIK 278
Query: 134 ----------TAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVV 183
+A++ Y +C + ++F M V + N+ I GL +NG+V+ + +
Sbjct: 279 QGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFGLSRNGQVESSLRL 338
Query: 184 FDQMREK----DDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCAS 239
F Q++++ + +W+ MI + G ++E ++LF MQ GV+ N ++ +L C +
Sbjct: 339 FRQLKDQGMELNVVSWTSMIACCSQNGRDIEALELFREMQIAGVKPNSVTIPCLLPACGN 398
Query: 240 LASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSI 299
+A+L HG+ H +R DVYV S LI MY KCG + ++ FD +K++V WN++
Sbjct: 399 IAALMHGKAAHCFSLRRGISTDVYVGSALIDMYAKCGRIQASRICFDGIPTKNLVCWNAV 458
Query: 300 ISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYL 359
I+GYA +G ++++++F M SG PD ++ VLSACS +G +EG F SM SKY
Sbjct: 459 IAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTCVLSACSQSGLTEEGSYYFNSMSSKYG 518
Query: 360 VEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAA 419
+E + EHYACMV LL RAG++E A +I MP PDA +WG+LL +CR H + L EVAA
Sbjct: 519 IEARVEHYACMVTLLSRAGKLEQAYAMIRRMPVNPDACVWGALLSSCRVHNNVSLGEVAA 578
Query: 420 KKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMF 479
+KL +LEP N G YILLSNIYAS+G +++V +R M+ + + K PGCSWIEV+ KVHM
Sbjct: 579 EKLFELEPSNPGNYILLSNIYASKGMWNEVNRVRDMMKNKGLRKNPGCSWIEVKNKVHML 638
Query: 480 TGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVA 539
D SHP+ I+ L+K+ +++ GY P+ +FVL DV+E++K L HSEKLAV
Sbjct: 639 LAGD-KSHPQMTQIIEKLDKLSMEMKKLGYFPEINFVLQDVEEQDKEQILCGHSEKLAVV 697
Query: 540 YGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDY 599
+GL+ P G P++V+KNLR+CGDCH IK IS REI +RD NRFHHFK+G CSC DY
Sbjct: 698 FGLLNTPPGYPLQVIKNLRICGDCHVVIKFISSFERREIFVRDTNRFHHFKEGACSCGDY 757
Query: 600 W 600
W
Sbjct: 758 W 758
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 92/175 (52%)
Query: 180 ARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCAS 239
A +V D + E + ++S +I + + + F+ M G+ + L S + CA
Sbjct: 67 ATLVLDLVPEPNVFSFSTLIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAG 126
Query: 240 LASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSI 299
L++L RQVH FD D +V S L+ MYIKC ++ +FD D+V W+++
Sbjct: 127 LSALKPARQVHGIASVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSAL 186
Query: 300 ISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESM 354
++ YA+ G +++ ++F EM SGV P+ ++ G+++ +++G E +F M
Sbjct: 187 VAAYARQGCVDEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDM 241
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 84/168 (50%), Gaps = 2/168 (1%)
Query: 238 ASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWN 297
++ ASL RQ HA +++ D ++A+ L++ Y L+ D ++ ++
Sbjct: 24 STTASLSQTRQAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLDLVPEPNVFSFS 83
Query: 298 SIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSK 357
++I ++++ +L F +M + G+MPD+ L + AC+ +K R++ + S
Sbjct: 84 TLIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQV-HGIASV 142
Query: 358 YLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
+ + + +V + + Q+ DA ++ + M FEPD + W +L+ A
Sbjct: 143 SGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRM-FEPDVVSWSALVAA 189
>gi|359497798|ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 809
Score = 469 bits (1207), Expect = e-129, Method: Compositional matrix adjust.
Identities = 241/625 (38%), Positives = 386/625 (61%), Gaps = 31/625 (4%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM------PEK----NVVSWTVMLGGFIRD 50
MPERN+V+WT M+ + + G +A LF M P++ +V+S LG
Sbjct: 191 MPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALG 250
Query: 51 SRIDDARRLFDMMPEKDVVAQTNMVLGYCQ---DGRVDEGREIFDEMPKKNVISWTTMIS 107
++ R+ + DV ++V Y + DG VD+ R++F++MP+ NV+SWT +I+
Sbjct: 251 KQLHS--RVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIIT 308
Query: 108 GYVNNNRIDV-ARKLFEVMPE----KNEVSWTAMLMGYTQCGRIQDAW--ELFKAMPMKS 160
YV + D A +LF M N S++++L CG + D + E + +K
Sbjct: 309 AYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKA---CGNLSDPYTGEQVYSYAVKL 365
Query: 161 VVAS-----NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLF 215
+AS NS+I ++G ++ AR FD + EK+ +++ ++ Y + E LF
Sbjct: 366 GIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLF 425
Query: 216 TLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKC 275
+ G+ ++ + S+LS AS+ ++ G Q+H +L++ + + + + LI+MY +C
Sbjct: 426 NEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRC 485
Query: 276 GELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVL 335
G + +F+ ++++ W S+I+G+A++G ++L++FH+M +G P+++T V VL
Sbjct: 486 GNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVL 545
Query: 336 SACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPD 395
SACS+ G + EG++ F SM ++ + P+ EHYACMVDLLGR+G + +AM+ I +MP D
Sbjct: 546 SACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMAD 605
Query: 396 AIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKN 455
A++W +LLGACR H +L AA+ +L+ EP + YILLSN++AS G++ DV ++RK+
Sbjct: 606 ALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKS 665
Query: 456 MRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSF 515
M++RN+IK GCSWIEVE +VH F + SHP+ I + L+++ ++E GY PD+ F
Sbjct: 666 MKERNLIKEAGCSWIEVENRVHRFHVGE-TSHPQAWQIYQELDQLASKIKEMGYIPDTDF 724
Query: 516 VLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMG 575
VLHD++EE+K L HSEK+AVA+GL+ + PIR+ KNLRVCGDCH+AIK IS G
Sbjct: 725 VLHDIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIRIFKNLRVCGDCHTAIKYISMATG 784
Query: 576 REIILRDANRFHHFKDGLCSCRDYW 600
REI++RD+NRFHH K+G+CSC DYW
Sbjct: 785 REIVVRDSNRFHHIKNGVCSCNDYW 809
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 100/407 (24%), Positives = 191/407 (46%), Gaps = 35/407 (8%)
Query: 31 QMPEKNVVSWTVMLGGFIRDSRIDDA----RRLFDMMPEKDVVAQTNMVLGYCQDGRVDE 86
Q ++ +++++L IR R+L E D V ++ Y + G +
Sbjct: 20 QNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKCGDTET 79
Query: 87 GREIFDEM-PKKNVISWTTMISGYVNNN----RIDVARKLFEVMPEKNEVSWTAMLMGYT 141
R IF+ M K++++SW+ M+S + NN+ I + E+ NE + A++
Sbjct: 80 ARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIRA-- 137
Query: 142 QCGRIQDAW--ELFKAMPMKSVVASNSMILG-------LGQNGEVQKARVVFDQMREKDD 192
C AW E+ +K+ + +G + +G++ A VFD+M E++
Sbjct: 138 -CSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNL 196
Query: 193 ATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQ 252
TW+ MI + + G + IDLF M+ G + + SVLS C L L G+Q+H++
Sbjct: 197 VTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSR 256
Query: 253 LVRCQFDVDVYVASVLITMYIKC---GELVKGKLIFDNFASKDIVMWNSIISGYAQYGLG 309
++R +DV V L+ MY KC G + + +F+ +++ W +II+ Y Q G
Sbjct: 257 VIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGEC 316
Query: 310 EK-SLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYA 368
+K ++++F +M S + P+ + VL AC G +++ Y V+
Sbjct: 317 DKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVY-----SYAVKLGIASVN 371
Query: 369 C----MVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMK 411
C ++ + R+G++EDA K + + FE + + + +++ ++K
Sbjct: 372 CVGNSLISMYARSGRMEDARKAFDIL-FEKNLVSYNAIVDGYAKNLK 417
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 90/185 (48%), Gaps = 3/185 (1%)
Query: 217 LMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCG 276
LM ++ + + +L C + G+ VH +L++ ++D V + LI++Y KCG
Sbjct: 16 LMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKCG 75
Query: 277 ELVKGKLIFDNFASK-DIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVL 335
+ +LIF+ +K D+V W++++S +A + +++ F +M G P++ V+
Sbjct: 76 DTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVI 135
Query: 336 SACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGR-AGQVEDAMKLIEAMPFEP 394
ACS G I+ + +E ++D+ + +G + A K+ + MP E
Sbjct: 136 RACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMP-ER 194
Query: 395 DAIIW 399
+ + W
Sbjct: 195 NLVTW 199
>gi|78183583|dbj|BAD67156.2| PpPPR_77 [Physcomitrella patens]
Length = 1106
Score = 469 bits (1207), Expect = e-129, Method: Compositional matrix adjust.
Identities = 245/614 (39%), Positives = 366/614 (59%), Gaps = 19/614 (3%)
Query: 4 RNVVSWTAMVRGYVEEGMITEAGTLFWQMP----EKNVVSWTVMLGGFIRDSRIDDARRL 59
R+V+SW +M+ G+ + G A LF +M E + +++ +L G ++ +++
Sbjct: 495 RDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQI 554
Query: 60 FDMMPEK----DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRI 115
+ E DV ++ Y + G + + R +F + ++V+SWT MI G +
Sbjct: 555 HGRITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGED 614
Query: 116 DVARKLFEVM------PEKNEVSWTAMLMGYTQC---GRIQDAWELFKAMPMKSVVASNS 166
A +LF M P K+ S + + C G+ A+ L + + V N+
Sbjct: 615 MKAIELFWQMQNEGFRPVKSTFSSILKVCTSSACLDEGKKVIAYILNSGYELDTGVG-NA 673
Query: 167 MILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVN 226
+I ++G + AR VFD+M +D +W+ +I Y + G ++ MQ++ V N
Sbjct: 674 LISAYSKSGSMTDAREVFDKMPSRDIVSWNKIIAGYAQNGLGQTAVEFAYQMQEQDVVPN 733
Query: 227 FPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFD 286
S +S+L+ C+S ++L+ G++VHA++V+ + DV V + LI+MY KCG + + +FD
Sbjct: 734 KFSFVSLLNACSSFSALEEGKRVHAEIVKRKLQGDVRVGAALISMYAKCGSQGEAQEVFD 793
Query: 287 NFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKE 346
N K++V WN++I+ YAQ+GL K+L F+ M G+ PD T +LSAC++ G V E
Sbjct: 794 NIIEKNVVTWNAMINAYAQHGLASKALGFFNCMEKEGIKPDGSTFTSILSACNHAGLVLE 853
Query: 347 GREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGAC 406
G +IF SM+S+Y V P EHY C+V LLGRA + ++A LI MPF PDA +W +LLGAC
Sbjct: 854 GYQIFSSMESEYGVLPTIEHYGCLVGLLGRARRFQEAETLINQMPFPPDAAVWETLLGAC 913
Query: 407 RTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPG 466
R H + LAE AA L+L +N YILLSN+YA+ GR+ DVA++R+ M R + K PG
Sbjct: 914 RIHGNIALAEHAANNALKLNARNPAVYILLSNVYAAAGRWDDVAKIRRVMEGRGIRKEPG 973
Query: 467 CSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKV 526
SWIEV+ +H F D SHPE I L+++ + EAGY PD+ VLHD+ + +
Sbjct: 974 RSWIEVDNIIHEFIAAD-RSHPETAEIYAELKRLSVEMEEAGYFPDTQHVLHDLGKAHQE 1032
Query: 527 HSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRF 586
SL HSE+LA+AYGL+K P G PIR+ KNLR+CGDCH+A K ISK++GREII RD+NRF
Sbjct: 1033 TSLCTHSERLAIAYGLIKTPPGTPIRIFKNLRICGDCHTASKFISKLVGREIIARDSNRF 1092
Query: 587 HHFKDGLCSCRDYW 600
H FK+G CSC DYW
Sbjct: 1093 HSFKNGKCSCEDYW 1106
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 116/429 (27%), Positives = 220/429 (51%), Gaps = 26/429 (6%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV----VSWTVMLGGFIRDSRIDDA 56
MP+R+++SW A++ GY EA L+ QM + V V++ +L S D
Sbjct: 391 MPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADG 450
Query: 57 RRLFDMMPEKDVVAQTNMVLG----YCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+ + + + + + ++ Y + G + E + +F+ ++VISW +MI+G+ +
Sbjct: 451 KMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQH 510
Query: 113 NRIDVARKLFEVMP----EKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMI 168
+ A KLF+ M E + +++ ++L G C + +A EL K + + + +
Sbjct: 511 GSYETAYKLFQEMQNEELEPDNITFASVLSG---C-KNPEALELGKQIHGRITESGLQLD 566
Query: 169 LGLGQN--------GEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQK 220
+ LG G +Q AR VF ++ +D +W+ MI +G +++ I+LF MQ
Sbjct: 567 VNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQN 626
Query: 221 EGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVK 280
EG R + S+L VC S A LD G++V A ++ +++D V + LI+ Y K G +
Sbjct: 627 EGFRPVKSTFSSILKVCTSSACLDEGKKVIAYILNSGYELDTGVGNALISAYSKSGSMTD 686
Query: 281 GKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSY 340
+ +FD S+DIV WN II+GYAQ GLG+ +++ ++M V+P+ + V +L+ACS
Sbjct: 687 AREVFDKMPSRDIVSWNKIIAGYAQNGLGQTAVEFAYQMQEQDVVPNKFSFVSLLNACSS 746
Query: 341 TGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWG 400
++EG+ + + + L + A ++ + + G +A ++ + + E + + W
Sbjct: 747 FSALEEGKRVHAEIVKRKL-QGDVRVGAALISMYAKCGSQGEAQEVFDNI-IEKNVVTWN 804
Query: 401 SLLGACRTH 409
+++ A H
Sbjct: 805 AMINAYAQH 813
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 111/520 (21%), Positives = 244/520 (46%), Gaps = 66/520 (12%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEK----NVVSWTVMLGGFIRDSRIDDA 56
MP R+V+SW +++ Y ++G +A LF +M N +++ +L + +++
Sbjct: 88 MPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENG 147
Query: 57 RRLFDMM----PEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+++ + ++D Q +++ Y + G + R++F + ++V+S+ TM+ Y
Sbjct: 148 KKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQK 207
Query: 113 NRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKS----VVAS 164
+ LF M + ++V++ +L +T + + + K + +
Sbjct: 208 AYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVG 267
Query: 165 NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVR 224
+++ + G+V A+ F ++D ++ +I + G+ +E + + M+ +GV
Sbjct: 268 TALVTMCVRCGDVDSAKQAFKGTADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVA 327
Query: 225 VNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLI 284
+N + +S+L+ C++ +L+ G+ +H+ + DV + + LI+MY +CG+L K + +
Sbjct: 328 LNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKAREL 387
Query: 285 FDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYT--- 341
F +D++ WN+II+GYA+ ++++++ +M S GV P VT + +LSAC+ +
Sbjct: 388 FYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAY 447
Query: 342 --------------------------------GKVKEGREIFESMKSKYLVEPKTEHYAC 369
G + E + +FE +++ ++ +
Sbjct: 448 ADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVIS-----WNS 502
Query: 370 MVDLLGRAGQVEDAMKLIEAMP---FEPDAIIWGSLLGACRTHMKLDLAEVAAKKL---- 422
M+ + G E A KL + M EPD I + S+L C+ L+L + ++
Sbjct: 503 MIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESG 562
Query: 423 LQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVI 462
LQL+ N G ++ N+Y G D + +++ R+V+
Sbjct: 563 LQLDV-NLGNALI--NMYIRCGSLQDARNVFHSLQHRDVM 599
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 100/419 (23%), Positives = 211/419 (50%), Gaps = 18/419 (4%)
Query: 4 RNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV----VSWTVMLGGFIRDSRIDDARRL 59
R+VVS+ M+ Y ++ + E LF QM + + V++ +L F S +D+ +R+
Sbjct: 192 RDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRI 251
Query: 60 FDMMPEK----DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN-NR 114
+ E+ D+ T +V + G VD ++ F ++V+ + +I+ + +
Sbjct: 252 HKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGTADRDVVVYNALIAALAQHGHN 311
Query: 115 IDVARKLFEVMPEKNEVSWTAMLMGYTQCG--RIQDAWELFKAM-----PMKSVVASNSM 167
++ + + + + ++ T L C + +A +L + V N++
Sbjct: 312 VEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNAL 371
Query: 168 ILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNF 227
I + G++ KAR +F M ++D +W+ +I Y R+ E + L+ MQ EGV+
Sbjct: 372 ISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGR 431
Query: 228 PSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDN 287
+ + +LS CA+ ++ G+ +H ++R + ++A+ L+ MY +CG L++ + +F+
Sbjct: 432 VTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEG 491
Query: 288 FASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEG 347
++D++ WNS+I+G+AQ+G E + K+F EM + + PD++T VLS C ++ G
Sbjct: 492 TQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELG 551
Query: 348 REIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGAC 406
++I + L + ++++ R G ++DA + ++ D + W +++G C
Sbjct: 552 KQIHGRITESGL-QLDVNLGNALINMYIRCGSLQDARNVFHSLQHR-DVMSWTAMIGGC 608
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 96/384 (25%), Positives = 191/384 (49%), Gaps = 14/384 (3%)
Query: 34 EKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEK----DVVAQTNMVLGYCQDGRVDEGRE 89
E ++ +L R + +A+R+ M E D+ ++ Y + V + +
Sbjct: 24 ETERATYVALLQNCTRKRLLPEAKRIHAQMVEAWVGPDIFLSNLLINMYVKCRSVLDAHQ 83
Query: 90 IFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGR 145
+F EMP+++VISW ++IS Y A +LFE M N++++ ++L
Sbjct: 84 VFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAE 143
Query: 146 IQDA----WELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKV 201
+++ ++ KA + NS++ G+ G++ +AR VF + +D +++ M+ +
Sbjct: 144 LENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGL 203
Query: 202 YERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVD 261
Y +K Y E + LF M EG+ + + I++L + + LD G+++H V + D
Sbjct: 204 YAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSD 263
Query: 262 VYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFS 321
+ V + L+TM ++CG++ K F A +D+V++N++I+ AQ+G ++ + ++ M S
Sbjct: 264 IRVGTALVTMCVRCGDVDSAKQAFKGTADRDVVVYNALIAALAQHGHNVEAFEQYYRMRS 323
Query: 322 SGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVE 381
GV + T + +L+ACS T K E ++ S S+ + ++ + R G +
Sbjct: 324 DGVALNRTTYLSILNACS-TSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLP 382
Query: 382 DAMKLIEAMPFEPDAIIWGSLLGA 405
A +L MP + D I W +++
Sbjct: 383 KARELFYTMP-KRDLISWNAIIAG 405
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 102/448 (22%), Positives = 209/448 (46%), Gaps = 25/448 (5%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEK----NVVSWTVMLGGFIRDSRIDDARR 58
+R+VV + A++ + G EA +++M N ++ +L ++ +
Sbjct: 292 DRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKL 351
Query: 59 LFDMMPE----KDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNR 114
+ + E DV ++ Y + G + + RE+F MPK+++ISW +I+GY
Sbjct: 352 IHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARRED 411
Query: 115 IDVARKLFEVMPEKN----EVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILG 170
A +L++ M + V++ +L D + + + ++S + SN +
Sbjct: 412 RGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDI-LRSGIKSNGHLAN 470
Query: 171 LGQN-----GEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRV 225
N G + +A+ VF+ + +D +W+ MI + + G LF MQ E +
Sbjct: 471 ALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEP 530
Query: 226 NFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIF 285
+ + SVLS C + +L+ G+Q+H ++ +DV + + LI MYI+CG L + +F
Sbjct: 531 DNITFASVLSGCKNPEALELGKQIHGRITESGLQLDVNLGNALINMYIRCGSLQDARNVF 590
Query: 286 DNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVK 345
+ +D++ W ++I G A G K++++F +M + G P T +L C+ + +
Sbjct: 591 HSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPVKSTFSSILKVCTSSACLD 650
Query: 346 EGREIFES-MKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLG 404
EG+++ + S Y E T ++ ++G + DA ++ + MP D + W ++
Sbjct: 651 EGKKVIAYILNSGY--ELDTGVGNALISAYSKSGSMTDAREVFDKMP-SRDIVSWNKIIA 707
Query: 405 ACRTHMKLDLAEVAAKKLLQLEPKNAGP 432
+ + L + A + Q++ ++ P
Sbjct: 708 G---YAQNGLGQTAVEFAYQMQEQDVVP 732
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 153/306 (50%), Gaps = 16/306 (5%)
Query: 113 NRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDA----WELFKAMPMKSVVASNSMI 168
+R DV+ E ++ A+L T+ + +A ++ +A + SN +I
Sbjct: 10 DREDVSNTHQPRPTETERATYVALLQNCTRKRLLPEAKRIHAQMVEAWVGPDIFLSNLLI 69
Query: 169 LGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFP 228
+ V A VF +M +D +W+ +I Y ++G++ + LF MQ G N
Sbjct: 70 NMYVKCRSVLDAHQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKI 129
Query: 229 SLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNF 288
+ IS+L+ C S A L++G+++H+Q+++ + D V + L++MY KCG+L + + +F
Sbjct: 130 TYISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGI 189
Query: 289 ASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGR 348
+ +D+V +N+++ YAQ ++ L +F +M S G+ PD VT + +L A + + EG+
Sbjct: 190 SPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGK 249
Query: 349 EIF-----ESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
I E + S V +V + R G V+ A + + + D +++ +L+
Sbjct: 250 RIHKLTVEEGLNSDIRVG------TALVTMCVRCGDVDSAKQAFKGTA-DRDVVVYNALI 302
Query: 404 GACRTH 409
A H
Sbjct: 303 AALAQH 308
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 131/269 (48%), Gaps = 16/269 (5%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV----VSWTVMLGGFIRDSRIDDA 56
+ R+V+SWTAM+ G ++G +A LFWQM + +++ +L + +D+
Sbjct: 593 LQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPVKSTFSSILKVCTSSACLDEG 652
Query: 57 RR----LFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
++ + + E D ++ Y + G + + RE+FD+MP ++++SW +I+GY N
Sbjct: 653 KKVIAYILNSGYELDTGVGNALISAYSKSGSMTDAREVFDKMPSRDIVSWNKIIAGYAQN 712
Query: 113 NRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDA----WELFKAMPMKSVVAS 164
A + M E+ N+ S+ ++L + +++ E+ K V
Sbjct: 713 GLGQTAVEFAYQMQEQDVVPNKFSFVSLLNACSSFSALEEGKRVHAEIVKRKLQGDVRVG 772
Query: 165 NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVR 224
++I + G +A+ VFD + EK+ TW+ MI Y + G + + F M+KEG++
Sbjct: 773 AALISMYAKCGSQGEAQEVFDNIIEKNVVTWNAMINAYAQHGLASKALGFFNCMEKEGIK 832
Query: 225 VNFPSLISVLSVCASLASLDHGRQVHAQL 253
+ + S+LS C + G Q+ + +
Sbjct: 833 PDGSTFTSILSACNHAGLVLEGYQIFSSM 861
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 105/217 (48%), Gaps = 18/217 (8%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVV----SWTVMLGGFIRDSRIDDA 56
MP R++VSW ++ GY + G+ A +QM E++VV S+ +L S +++
Sbjct: 694 MPSRDIVSWNKIIAGYAQNGLGQTAVEFAYQMQEQDVVPNKFSFVSLLNACSSFSALEEG 753
Query: 57 RRLFDMMPEK----DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+R+ + ++ DV ++ Y + G E +E+FD + +KNV++W MI+ Y +
Sbjct: 754 KRVHAEIVKRKLQGDVRVGAALISMYAKCGSQGEAQEVFDNIIEKNVVTWNAMINAYAQH 813
Query: 113 NRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAMP-----MKSVVA 163
A F M ++ + ++T++L G + + +++F +M + ++
Sbjct: 814 GLASKALGFFNCMEKEGIKPDGSTFTSILSACNHAGLVLEGYQIFSSMESEYGVLPTIEH 873
Query: 164 SNSMILGLGQNGEVQKARVVFDQMR-EKDDATWSGMI 199
++ LG+ Q+A + +QM D A W ++
Sbjct: 874 YGCLVGLLGRARRFQEAETLINQMPFPPDAAVWETLL 910
>gi|449449306|ref|XP_004142406.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Cucumis sativus]
Length = 782
Score = 469 bits (1207), Expect = e-129, Method: Compositional matrix adjust.
Identities = 235/603 (38%), Positives = 376/603 (62%), Gaps = 13/603 (2%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVV 69
T+++ Y + G A +F +M KN+ +W ++ +++ + + A F+ MP++D+V
Sbjct: 181 TSLLNMYAKCGDPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIV 240
Query: 70 AQTNMVLGYCQDGRVDEGREIFDEMP-----KKNVISWTTMISGYVNNNRIDVARKLFE- 123
+ +M+ GY Q G E IF +M K + + +++S N ++++ +++
Sbjct: 241 SWNSMISGYSQQGYNLEALVIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAY 300
Query: 124 VMPEKNEVSW---TAMLMGYTQCGRIQDAWELFKAMPMKS--VVASNSMILGLGQNGEVQ 178
++ + E S A++ Y + G ++ A + + + ++A S++ G + G V+
Sbjct: 301 ILRAETETSGAVGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVK 360
Query: 179 KARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCA 238
AR +F+++R++D W+ MI Y + G + ++LF LM EG N +L ++LSV +
Sbjct: 361 PAREIFNKLRDRDVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSS 420
Query: 239 SLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFD-NFASKDIVMWN 297
SL L+HG+Q+HA ++ V + LI MY K G + K +FD K+IV W
Sbjct: 421 SLTILEHGKQIHASAIKAGESSTPSVTNALIAMYAKTGNINVAKRVFDLPNGKKEIVSWT 480
Query: 298 SIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSK 357
S+I AQ+GLG++++ +F M S G+ PD +T VGVLSAC++ G V++GR+ + M
Sbjct: 481 SMIMALAQHGLGKEAINLFERMLSVGMKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEV 540
Query: 358 YLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEV 417
+ +EP HYACM+DL GRAG +++A IE+MP EPD I WGSLL +C+ H DLA+V
Sbjct: 541 HEIEPTLSHYACMIDLYGRAGLLQEAYLFIESMPIEPDNIAWGSLLASCKIHKNADLAKV 600
Query: 418 AAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVH 477
AA++LL ++P N+G Y+ L+N+Y++ G++ + A+ RK M+ R V K G SWI ++ +VH
Sbjct: 601 AAERLLLIDPGNSGAYLALANVYSACGKWENAAQTRKLMKDRGVRKEKGISWIHIKNEVH 660
Query: 478 MFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLA 537
F D + HP+ I +++ +I +++ G+ PD+ VLHD++EE K L+YHSEKLA
Sbjct: 661 AFGVEDVI-HPQKDEIYKLMAEIWEEIKKMGFIPDTESVLHDLEEEVKEQILKYHSEKLA 719
Query: 538 VAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCR 597
+A+GL+ PE +R+MKNLRVC DCHSAIK ISK++GREII+RDA RFHHFKDG CSCR
Sbjct: 720 IAFGLLNTPENTALRIMKNLRVCNDCHSAIKFISKLVGREIIVRDATRFHHFKDGSCSCR 779
Query: 598 DYW 600
DYW
Sbjct: 780 DYW 782
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 113/437 (25%), Positives = 212/437 (48%), Gaps = 45/437 (10%)
Query: 16 YVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMV 75
Y + G + A +F +MP K+ SW ++ G+ + + +RRL MP+ D V+ T ++
Sbjct: 55 YAKTGSLRFAHHVFDEMPLKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAII 114
Query: 76 LGYCQDGRVDEGREIFDEMPKKNV----ISWTTMISGYVNNNRIDVARKLFEVMPEKNEV 131
+GY Q G D +F +M + V + + ++S N +D+ RK+ + +
Sbjct: 115 VGYNQFGLFDNAIWMFAKMISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLG 174
Query: 132 S----WTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQM 187
S T++L Y +CG A +F M +K++ N++I Q+G+ + A F++M
Sbjct: 175 SCVPVATSLLNMYAKCGDPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKM 234
Query: 188 REKDDATWSGMIKVYERKGYELEVIDLFTLMQKE-GVRVNFPSLISVLSVCASLASLDHG 246
++D +W+ MI Y ++GY LE + +F+ M E ++ + +L S+LS CA+L L+ G
Sbjct: 235 PDRDIVSWNSMISGYSQQGYNLEALVIFSKMLNEPSLKPDNFTLASILSACANLEKLNIG 294
Query: 247 RQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKL----------------------- 283
+Q+HA ++R + + V + LI+MY K G + +L
Sbjct: 295 KQIHAYILRAETETSGAVGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYT 354
Query: 284 ----------IFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVG 333
IF+ +D+V W ++I GY Q GL +L++F M + G P+ TL
Sbjct: 355 KLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAA 414
Query: 334 VLSACSYTGKVKEGREIFES-MKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPF 392
+LS S ++ G++I S +K+ P + ++ + + G + A ++ +
Sbjct: 415 MLSVSSSLTILEHGKQIHASAIKAGESSTPSVTN--ALIAMYAKTGNINVAKRVFDLPNG 472
Query: 393 EPDAIIWGSLLGACRTH 409
+ + + W S++ A H
Sbjct: 473 KKEIVSWTSMIMALAQH 489
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 105/411 (25%), Positives = 180/411 (43%), Gaps = 80/411 (19%)
Query: 87 GREIFDEMPKKN----VISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQ 142
GR + ++ KK V +++ Y + A +F+ MP K+ SW ++ GY +
Sbjct: 29 GRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDEMPLKSTFSWNTLISGYAK 88
Query: 143 CGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVY 202
G + + L MP V+ ++I+G Q G +F D+A W
Sbjct: 89 QGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFG-------LF------DNAIW------- 128
Query: 203 ERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDV 262
+F M E V + ++ +VLS CA+ +LD GR++H+ +V+ V
Sbjct: 129 -----------MFAKMISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCV 177
Query: 263 YVASVLITMYIKCGELVKGKLIFDNFASK------------------------------- 291
VA+ L+ MY KCG+ V K++FD K
Sbjct: 178 PVATSLLNMYAKCGDPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDR 237
Query: 292 DIVMWNSIISGYAQYGLGEKSLKVFHEMFSS-GVMPDDVTLVGVLSACSYTGKVKEGREI 350
DIV WNS+ISGY+Q G ++L +F +M + + PD+ TL +LSAC+ K+ G++I
Sbjct: 238 DIVSWNSMISGYSQQGYNLEALVIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQI 297
Query: 351 FESMKSKYLVEPKTEHYA----CMVDLLGRAGQVEDAMKLIE-AMPFEPDAIIWGSLLGA 405
Y++ +TE ++ + ++G VE A ++E + I + SLL
Sbjct: 298 -----HAYILRAETETSGAVGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDG 352
Query: 406 CRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNM 456
+ KL + A + +L ++ + + Y G ++D EL + M
Sbjct: 353 ---YTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQNGLWNDALELFRLM 400
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 37/172 (21%), Positives = 82/172 (47%), Gaps = 13/172 (7%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMP----EKNVVSWTVMLGGFIRDSRIDDARR 58
++ +VSWT+M+ + G+ EA LF +M + + +++ +L ++ R+
Sbjct: 473 KKEIVSWTSMIMALAQHGLGKEAINLFERMLSVGMKPDHITYVGVLSACTHVGLVEQGRK 532
Query: 59 LFDMMPEKDVVAQT-----NMVLGYCQDGRVDEGREIFDEMP-KKNVISWTTMISG---Y 109
++MM E + T M+ Y + G + E + MP + + I+W ++++ +
Sbjct: 533 YYNMMTEVHEIEPTLSHYACMIDLYGRAGLLQEAYLFIESMPIEPDNIAWGSLLASCKIH 592
Query: 110 VNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSV 161
N + VA + ++ N ++ A+ Y+ CG+ ++A + K M + V
Sbjct: 593 KNADLAKVAAERLLLIDPGNSGAYLALANVYSACGKWENAAQTRKLMKDRGV 644
>gi|296083564|emb|CBI23556.3| unnamed protein product [Vitis vinifera]
Length = 827
Score = 469 bits (1207), Expect = e-129, Method: Compositional matrix adjust.
Identities = 241/625 (38%), Positives = 386/625 (61%), Gaps = 31/625 (4%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM------PEK----NVVSWTVMLGGFIRD 50
MPERN+V+WT M+ + + G +A LF M P++ +V+S LG
Sbjct: 209 MPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALG 268
Query: 51 SRIDDARRLFDMMPEKDVVAQTNMVLGYCQ---DGRVDEGREIFDEMPKKNVISWTTMIS 107
++ R+ + DV ++V Y + DG VD+ R++F++MP+ NV+SWT +I+
Sbjct: 269 KQLHS--RVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIIT 326
Query: 108 GYVNNNRIDV-ARKLFEVMPE----KNEVSWTAMLMGYTQCGRIQDAW--ELFKAMPMKS 160
YV + D A +LF M N S++++L CG + D + E + +K
Sbjct: 327 AYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKA---CGNLSDPYTGEQVYSYAVKL 383
Query: 161 VVAS-----NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLF 215
+AS NS+I ++G ++ AR FD + EK+ +++ ++ Y + E LF
Sbjct: 384 GIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLF 443
Query: 216 TLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKC 275
+ G+ ++ + S+LS AS+ ++ G Q+H +L++ + + + + LI+MY +C
Sbjct: 444 NEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRC 503
Query: 276 GELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVL 335
G + +F+ ++++ W S+I+G+A++G ++L++FH+M +G P+++T V VL
Sbjct: 504 GNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVL 563
Query: 336 SACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPD 395
SACS+ G + EG++ F SM ++ + P+ EHYACMVDLLGR+G + +AM+ I +MP D
Sbjct: 564 SACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMAD 623
Query: 396 AIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKN 455
A++W +LLGACR H +L AA+ +L+ EP + YILLSN++AS G++ DV ++RK+
Sbjct: 624 ALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKS 683
Query: 456 MRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSF 515
M++RN+IK GCSWIEVE +VH F + SHP+ I + L+++ ++E GY PD+ F
Sbjct: 684 MKERNLIKEAGCSWIEVENRVHRFHVGE-TSHPQAWQIYQELDQLASKIKEMGYIPDTDF 742
Query: 516 VLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMG 575
VLHD++EE+K L HSEK+AVA+GL+ + PIR+ KNLRVCGDCH+AIK IS G
Sbjct: 743 VLHDIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIRIFKNLRVCGDCHTAIKYISMATG 802
Query: 576 REIILRDANRFHHFKDGLCSCRDYW 600
REI++RD+NRFHH K+G+CSC DYW
Sbjct: 803 REIVVRDSNRFHHIKNGVCSCNDYW 827
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 100/407 (24%), Positives = 191/407 (46%), Gaps = 35/407 (8%)
Query: 31 QMPEKNVVSWTVMLGGFIRDSRIDDA----RRLFDMMPEKDVVAQTNMVLGYCQDGRVDE 86
Q ++ +++++L IR R+L E D V ++ Y + G +
Sbjct: 38 QNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKCGDTET 97
Query: 87 GREIFDEM-PKKNVISWTTMISGYVNNN----RIDVARKLFEVMPEKNEVSWTAMLMGYT 141
R IF+ M K++++SW+ M+S + NN+ I + E+ NE + A++
Sbjct: 98 ARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIRA-- 155
Query: 142 QCGRIQDAW--ELFKAMPMKSVVASNSMILG-------LGQNGEVQKARVVFDQMREKDD 192
C AW E+ +K+ + +G + +G++ A VFD+M E++
Sbjct: 156 -CSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNL 214
Query: 193 ATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQ 252
TW+ MI + + G + IDLF M+ G + + SVLS C L L G+Q+H++
Sbjct: 215 VTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSR 274
Query: 253 LVRCQFDVDVYVASVLITMYIKC---GELVKGKLIFDNFASKDIVMWNSIISGYAQYGLG 309
++R +DV V L+ MY KC G + + +F+ +++ W +II+ Y Q G
Sbjct: 275 VIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGEC 334
Query: 310 EK-SLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYA 368
+K ++++F +M S + P+ + VL AC G +++ Y V+
Sbjct: 335 DKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVY-----SYAVKLGIASVN 389
Query: 369 C----MVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMK 411
C ++ + R+G++EDA K + + FE + + + +++ ++K
Sbjct: 390 CVGNSLISMYARSGRMEDARKAFDIL-FEKNLVSYNAIVDGYAKNLK 435
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 90/185 (48%), Gaps = 3/185 (1%)
Query: 217 LMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCG 276
LM ++ + + +L C + G+ VH +L++ ++D V + LI++Y KCG
Sbjct: 34 LMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKCG 93
Query: 277 ELVKGKLIFDNFASK-DIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVL 335
+ +LIF+ +K D+V W++++S +A + +++ F +M G P++ V+
Sbjct: 94 DTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVI 153
Query: 336 SACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGR-AGQVEDAMKLIEAMPFEP 394
ACS G I+ + +E ++D+ + +G + A K+ + MP E
Sbjct: 154 RACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMP-ER 212
Query: 395 DAIIW 399
+ + W
Sbjct: 213 NLVTW 217
>gi|449492963|ref|XP_004159154.1| PREDICTED: uncharacterized protein LOC101226880 [Cucumis sativus]
Length = 1725
Score = 469 bits (1206), Expect = e-129, Method: Compositional matrix adjust.
Identities = 249/623 (39%), Positives = 374/623 (60%), Gaps = 26/623 (4%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQM------PEKNVVSWTVMLGGFIRD--SRID 54
+ NV SW +++ G EA F + P ++ T+ + D S
Sbjct: 1104 KSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSGRM 1163
Query: 55 DARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNR 114
++ F E D+ + ++ Y + G++ + R +FDE+P +NV+SWT+MI+GYV N +
Sbjct: 1164 SHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQ 1223
Query: 115 IDVARKLF-EVMPEKNEV--------SWTAMLMGYTQCGRI--QDAWELFKAMPMK---- 159
D A LF + + E+ EV M+ + C R+ + E +K
Sbjct: 1224 ADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFD 1283
Query: 160 -SVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLM 218
S+ N+++ + G+ ++ VFD M EKDD +W+ MI VY + G E +++F M
Sbjct: 1284 GSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGM 1343
Query: 219 QKE-GVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGE 277
+ GVR N +L +VL CA +L G+ +H Q+++ + +V V + +I MY KCG
Sbjct: 1344 VRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGR 1403
Query: 278 LVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSA 337
+ K FD K++ W ++++GY +G +++L +F++M +GV P+ +T V VL+A
Sbjct: 1404 VEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAA 1463
Query: 338 CSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAI 397
CS+ G V+EG F +MK KY +EP EHY CMVDL GRAG + +A LI+ M +PD +
Sbjct: 1464 CSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMKPDFV 1523
Query: 398 IWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMR 457
+WGSLLGACR H +DL E+AA+KL +L+P N G Y+LLSN+YA GR+ DV +R M+
Sbjct: 1524 VWGSLLGACRIHKNVDLGEIAAQKLFELDPDNCGYYVLLSNLYADAGRWADVERMRMLMK 1583
Query: 458 KRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVL 517
R ++KPPG S +E++ +VH+F D HP H MI + LEK+ L++ GY P+ + VL
Sbjct: 1584 NRQLVKPPGFSLVELKGRVHVFLVGD-KEHPHHEMIYKYLEKLTLELQKIGYVPNMTSVL 1642
Query: 518 HDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGRE 577
HDVDEEEK LR HSEKLAVA+G++ G I ++KNLRVCGDCH+ IKLISK++ R+
Sbjct: 1643 HDVDEEEKEIILRVHSEKLAVAFGVMNSAPGTTINIIKNLRVCGDCHTVIKLISKLVHRD 1702
Query: 578 IILRDANRFHHFKDGLCSCRDYW 600
++RD+ RFHHFKDG+CSC DYW
Sbjct: 1703 FVVRDSKRFHHFKDGVCSCGDYW 1725
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 108/380 (28%), Positives = 184/380 (48%), Gaps = 35/380 (9%)
Query: 12 MVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQ 71
++ Y G I A LF+Q+ +W +++ + + A L+ M + + A
Sbjct: 65 LIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQGIAAD 124
Query: 72 T---NMVLGYCQDG-RVDEGREIFDEMPKKNVISWTTMISG--YVNNNRIDVARKLFEVM 125
V+ C + +D G+ + + K SG +V NN ID
Sbjct: 125 KFTFPFVIKACTNFLSIDLGKVVHGSLIKYG-------FSGDVFVQNNLIDF-------- 169
Query: 126 PEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFD 185
Y +CG + A ++F+ M +++VV+ ++I GL G++Q+AR +FD
Sbjct: 170 --------------YFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFD 215
Query: 186 QMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDH 245
++ K+ +W+ MI Y R E ++LF MQ E + N +++S++ C + L
Sbjct: 216 EIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTL 275
Query: 246 GRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQ 305
GR +H ++ ++ VY+ + LI MY KCG + +F+ K + WNS+I+
Sbjct: 276 GRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGV 335
Query: 306 YGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTE 365
+GLG+++L +F EM V PD +T +GVL AC + VKEG F M Y + P E
Sbjct: 336 HGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPE 395
Query: 366 HYACMVDLLGRAGQVEDAMK 385
HY CM +L R+ +++A K
Sbjct: 396 HYECMTELYARSNNLDEAFK 415
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 133/290 (45%), Gaps = 36/290 (12%)
Query: 174 NGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISV 233
+G + A ++F Q++ TW+ +I+ G + + L+ M +G+ + + V
Sbjct: 72 HGRIAYAILLFYQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFV 131
Query: 234 LSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCG----------------- 276
+ C + S+D G+ VH L++ F DV+V + LI Y KCG
Sbjct: 132 IKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNV 191
Query: 277 --------------ELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSS 322
+L + + IFD SK++V W ++I+GY + E++L++F M +
Sbjct: 192 VSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAE 251
Query: 323 GVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVED 382
+ P++ T+V ++ AC+ G + GR I + K +E ++D+ + G ++D
Sbjct: 252 NIFPNEYTMVSLIKACTEMGILTLGRGIHD-YAIKNCIEIGVYLGTALIDMYSKCGSIKD 310
Query: 383 AMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGP 432
A+++ E MP W S++ + H L + A ++E N P
Sbjct: 311 AIEVFETMP-RKSLPTWNSMITSLGVH---GLGQEALNLFSEMERVNVKP 356
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 83/164 (50%), Gaps = 8/164 (4%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
M RNVVSWT ++ G + G + EA +F ++P KNVVSWT M+ G+IR+ + ++A LF
Sbjct: 186 MRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELF 245
Query: 61 DMMPEKDVVAQ----TNMVLGYCQDGRVDEGREIFDEMPKK----NVISWTTMISGYVNN 112
M +++ +++ + G + GR I D K V T +I Y
Sbjct: 246 KRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKC 305
Query: 113 NRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAM 156
I A ++FE MP K+ +W +M+ G Q+A LF M
Sbjct: 306 GSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEM 349
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 93/221 (42%), Gaps = 5/221 (2%)
Query: 242 SLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIIS 301
+ H RQ+HA+++R D + LI +Y G + L+F + WN II
Sbjct: 39 NFKHLRQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIR 98
Query: 302 GYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVE 361
GL E++L ++ M G+ D T V+ AC+ + G+ + S+ KY
Sbjct: 99 ANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSL-IKYGFS 157
Query: 362 PKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKK 421
++D + G A+K+ E M + + W +++ + DL E A +
Sbjct: 158 GDVFVQNNLIDFYFKCGHTRFALKVFEKMRVR-NVVSWTTVISGLISCG--DLQE-ARRI 213
Query: 422 LLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVI 462
++ KN + + N Y + + EL K M+ N+
Sbjct: 214 FDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIF 254
Score = 45.4 bits (106), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 78/176 (44%), Gaps = 15/176 (8%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM----PEKNVVSWTVMLGGFIRDSRIDDA 56
M E+NV SWTAMV GY G EA +F++M + N +++ +L +++
Sbjct: 1414 MKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACSHAGLVEEG 1473
Query: 57 RRLFDMMPEK-----DVVAQTNMVLGYCQDGRVDEGREIFDEMP-KKNVISWTTMISGYV 110
F+ M K + MV + + G ++E + M K + + W +++
Sbjct: 1474 WHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMKPDFVVWGSLLGACR 1533
Query: 111 NNNRIDV----ARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVV 162
+ +D+ A+KLFE+ P+ N + + Y GR D + M + +V
Sbjct: 1534 IHKNVDLGEIAAQKLFELDPD-NCGYYVLLSNLYADAGRWADVERMRMLMKNRQLV 1588
>gi|449455978|ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212001 [Cucumis sativus]
Length = 2598
Score = 468 bits (1205), Expect = e-129, Method: Compositional matrix adjust.
Identities = 249/621 (40%), Positives = 373/621 (60%), Gaps = 26/621 (4%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQM------PEKNVVSWTVMLGGFIRD--SRIDDA 56
NV SW +++ G EA F + P ++ T+ + D S
Sbjct: 1979 NVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSGRMSH 2038
Query: 57 RRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRID 116
++ F E D+ + ++ Y + G++ + R +FDE+P +NV+SWT+MI+GYV N + D
Sbjct: 2039 QQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQAD 2098
Query: 117 VARKLF-EVMPEKNEV--------SWTAMLMGYTQCGRI--QDAWELFKAMPMK-----S 160
A LF + + E+ EV M+ + C R+ + E +K S
Sbjct: 2099 NALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGS 2158
Query: 161 VVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQK 220
+ N+++ + G+ ++ VFD M EKDD +W+ MI VY + G E +++F M +
Sbjct: 2159 IGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVR 2218
Query: 221 E-GVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELV 279
GVR N +L +VL CA +L G+ +H Q+++ + +V V + +I MY KCG +
Sbjct: 2219 HVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVE 2278
Query: 280 KGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACS 339
K FD K++ W ++++GY +G +++L +F++M +GV P+ +T V VL+ACS
Sbjct: 2279 MAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACS 2338
Query: 340 YTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIW 399
+ G V+EG F +MK KY +EP EHY CMVDL GRAG + +A LI+ M +PD ++W
Sbjct: 2339 HAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMKPDFVVW 2398
Query: 400 GSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKR 459
GSLLGACR H +DL E+AA+KL +L+P N G Y+LLSN+YA GR+ DV +R M+ R
Sbjct: 2399 GSLLGACRIHKNVDLGEIAAQKLFELDPDNCGYYVLLSNLYADAGRWADVERMRMLMKNR 2458
Query: 460 NVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHD 519
++KPPG S +E++ +VH+F D HP H MI + LEK+ L++ GY P+ + VLHD
Sbjct: 2459 QLVKPPGFSLVELKGRVHVFLVGD-KEHPHHEMIYKYLEKLTLELQKIGYVPNMTSVLHD 2517
Query: 520 VDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREII 579
VDEEEK LR HSEKLAVA+G++ G I ++KNLRVCGDCH+ IKLISK++ R+ +
Sbjct: 2518 VDEEEKEIILRVHSEKLAVAFGVMNSAPGTTINIIKNLRVCGDCHTVIKLISKLVHRDFV 2577
Query: 580 LRDANRFHHFKDGLCSCRDYW 600
+RD+ RFHHFKDG+CSC DYW
Sbjct: 2578 VRDSKRFHHFKDGVCSCGDYW 2598
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 108/380 (28%), Positives = 184/380 (48%), Gaps = 35/380 (9%)
Query: 12 MVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQ 71
++ Y G I A LF+Q+ +W +++ + + A L+ M + + A
Sbjct: 65 LIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQGIAAD 124
Query: 72 T---NMVLGYCQDG-RVDEGREIFDEMPKKNVISWTTMISG--YVNNNRIDVARKLFEVM 125
V+ C + +D G+ + + K SG +V NN ID
Sbjct: 125 KFTFPFVIKACTNFLSIDLGKVVHGSLIKYG-------FSGDVFVQNNLIDF-------- 169
Query: 126 PEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFD 185
Y +CG + A ++F+ M +++VV+ ++I GL G++Q+AR +FD
Sbjct: 170 --------------YFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFD 215
Query: 186 QMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDH 245
++ K+ +W+ MI Y R E ++LF MQ E + N +++S++ C + L
Sbjct: 216 EIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTL 275
Query: 246 GRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQ 305
GR +H ++ ++ VY+ + LI MY KCG + +F+ K + WNS+I+
Sbjct: 276 GRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGV 335
Query: 306 YGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTE 365
+GLG+++L +F EM V PD +T +GVL AC + VKEG F M Y + P E
Sbjct: 336 HGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPE 395
Query: 366 HYACMVDLLGRAGQVEDAMK 385
HY CM +L R+ +++A K
Sbjct: 396 HYECMTELYARSNNLDEAFK 415
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 133/290 (45%), Gaps = 36/290 (12%)
Query: 174 NGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISV 233
+G + A ++F Q++ TW+ +I+ G + + L+ M +G+ + + V
Sbjct: 72 HGRIAYAILLFYQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFV 131
Query: 234 LSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCG----------------- 276
+ C + S+D G+ VH L++ F DV+V + LI Y KCG
Sbjct: 132 IKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNV 191
Query: 277 --------------ELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSS 322
+L + + IFD SK++V W ++I+GY + E++L++F M +
Sbjct: 192 VSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAE 251
Query: 323 GVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVED 382
+ P++ T+V ++ AC+ G + GR I + K +E ++D+ + G ++D
Sbjct: 252 NIFPNEYTMVSLIKACTEMGILTLGRGIHD-YAIKNCIEIGVYLGTALIDMYSKCGSIKD 310
Query: 383 AMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGP 432
A+++ E MP W S++ + H L + A ++E N P
Sbjct: 311 AIEVFETMP-RKSLPTWNSMITSLGVH---GLGQEALNLFSEMERVNVKP 356
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 120/255 (47%), Gaps = 16/255 (6%)
Query: 162 VASNSMILGL--GQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQ 219
+ NS++ G+ G+ A + + + + +W+ +I R G +E + F+ ++
Sbjct: 1948 ITYNSILFGVPSGREDHSNLATWFYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLR 2007
Query: 220 KEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELV 279
K G+ S + C++L L GR H Q F+ D++V+S LI MY KCG+L
Sbjct: 2008 KLGLIPTRSSFPCTIKSCSALCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLK 2067
Query: 280 KGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMF--------SSGVMPDDVTL 331
+ +FD +++V W S+I+GY Q + +L +F + + V D V +
Sbjct: 2068 DARALFDEIPLRNVVSWTSMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVM 2127
Query: 332 VGVLSACS-YTGK-VKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEA 389
V VLSACS +GK + EG F K + ++D + GQ + K+ +
Sbjct: 2128 VSVLSACSRVSGKGITEGVHGFVVKKG---FDGSIGVGNTLMDAYAKCGQPLVSKKVFDW 2184
Query: 390 MPFEPDAIIWGSLLG 404
M E D I W S++
Sbjct: 2185 ME-EKDDISWNSMIA 2198
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 88/179 (49%), Gaps = 8/179 (4%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
M RNVVSWT ++ G + G + EA +F ++P KNVVSWT M+ G+IR+ + ++A LF
Sbjct: 186 MRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELF 245
Query: 61 DMMPEKDVVAQ----TNMVLGYCQDGRVDEGREIFDEMPKK----NVISWTTMISGYVNN 112
M +++ +++ + G + GR I D K V T +I Y
Sbjct: 246 KRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKC 305
Query: 113 NRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGL 171
I A ++FE MP K+ +W +M+ G Q+A LF M +V +G+
Sbjct: 306 GSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGV 364
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 93/221 (42%), Gaps = 5/221 (2%)
Query: 242 SLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIIS 301
+ H RQ+HA+++R D + LI +Y G + L+F + WN II
Sbjct: 39 NFKHLRQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIR 98
Query: 302 GYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVE 361
GL E++L ++ M G+ D T V+ AC+ + G+ + S+ KY
Sbjct: 99 ANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSL-IKYGFS 157
Query: 362 PKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKK 421
++D + G A+K+ E M + + W +++ + DL E A +
Sbjct: 158 GDVFVQNNLIDFYFKCGHTRFALKVFEKMRVR-NVVSWTTVISGLISCG--DLQE-ARRI 213
Query: 422 LLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVI 462
++ KN + + N Y + + EL K M+ N+
Sbjct: 214 FDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIF 254
Score = 45.8 bits (107), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 79/176 (44%), Gaps = 15/176 (8%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM----PEKNVVSWTVMLGGFIRDSRIDDA 56
M E+NV SWTAMV GY G EA +F++M + N +++ +L +++
Sbjct: 2287 MKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACSHAGLVEEG 2346
Query: 57 RRLFDMMPEK-DVVAQTN----MVLGYCQDGRVDEGREIFDEMP-KKNVISWTTMISGYV 110
F+ M K D+ MV + + G ++E + M K + + W +++
Sbjct: 2347 WHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMKPDFVVWGSLLGACR 2406
Query: 111 NNNRIDV----ARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVV 162
+ +D+ A+KLFE+ P+ N + + Y GR D + M + +V
Sbjct: 2407 IHKNVDLGEIAAQKLFELDPD-NCGYYVLLSNLYADAGRWADVERMRMLMKNRQLV 2461
Score = 43.1 bits (100), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 66/166 (39%), Gaps = 40/166 (24%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDM 62
E NV T+++ Y + G + A F +M EKNV SWT M
Sbjct: 2258 EYNVCVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAM------------------- 2298
Query: 63 MPEKDVVAQTNMVLGYCQDGRVDEGREIFDEM----PKKNVISWTTMISGYVNNNRIDVA 118
V GY GR E +IF +M K N I++ ++++ + ++
Sbjct: 2299 ------------VAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACSHAGLVEEG 2346
Query: 119 RKLFEVMPEKNEVS-----WTAMLMGYTQCGRIQDAWELFKAMPMK 159
F M K ++ + M+ + + G + +A+ L K M MK
Sbjct: 2347 WHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMK 2392
>gi|449526834|ref|XP_004170418.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 666
Score = 468 bits (1205), Expect = e-129, Method: Compositional matrix adjust.
Identities = 244/582 (41%), Positives = 357/582 (61%), Gaps = 13/582 (2%)
Query: 28 LFWQMPEKNVVSWTVMLGGFIRDSRIDDA-----RRLFDMMPEKDVVAQTNMVLGYCQDG 82
+F +P NV W +++ G + ++++ A R + D P K Q
Sbjct: 89 VFSSIPNPNVFIWNIVIKGCLENNKLFKAIYFYGRMVIDARPNKFTYPTLFKACSVAQ-- 146
Query: 83 RVDEGREIFDEMPKKNVIS----WTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLM 138
V EGR+I + K + S + I Y + R++ ARK+F E + V W M+
Sbjct: 147 AVQEGRQIHGHVVKHGIGSDVHIKSAGIQMYASFGRLEDARKMF-YSGESDVVCWNTMID 205
Query: 139 GYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGM 198
GY +CG ++ A LF MP+K++ + N MI GL + G + AR +FD+M E+D+ +WS M
Sbjct: 206 GYLKCGVLEAAKGLFAQMPVKNIGSWNVMINGLAKGGNLGDARKLFDEMSERDEISWSSM 265
Query: 199 IKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQF 258
+ Y G E +++F MQ+E R L SVL+ C+++ ++D GR VHA L R
Sbjct: 266 VDGYISAGRYKEALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNSI 325
Query: 259 DVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHE 318
+D + + L+ MY KCG L G +F+ ++I WN++I G A +G E +L++F +
Sbjct: 326 KLDAVLGTALLDMYAKCGRLDMGWEVFEEMKEREIFTWNAMIGGLAIHGRAEDALELFSK 385
Query: 319 MFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAG 378
+ + P+ +TLVGVL+AC++ G V +G IF++M+ Y V+P+ EHY CMVDLLGR+G
Sbjct: 386 LQEGRMKPNGITLVGVLTACAHAGFVDKGLRIFQTMREFYGVDPELEHYGCMVDLLGRSG 445
Query: 379 QVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSN 438
+A LI +MP +P+A +WG+LLGACR H DLAE K LL+LEP+N+G Y+LLSN
Sbjct: 446 LFSEAEDLINSMPMKPNAAVWGALLGACRIHGNFDLAERVGKILLELEPQNSGRYVLLSN 505
Query: 439 IYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLE 498
IYA GRF DV+++RK M+ R + PG S +++ VH F D SHP+ I R L+
Sbjct: 506 IYAKVGRFDDVSKIRKLMKNRGIKTVPGVSIVDLNGTVHEFKMGDG-SHPQMKEIYRKLK 564
Query: 499 KIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLR 558
I L+ AG+ PD+S VL D+DEEEK ++ YHSEKLA+A+GL+ G I ++KNLR
Sbjct: 565 IIKERLQMAGHSPDTSQVLFDIDEEEKETAVNYHSEKLAIAFGLINTLPGKRIHIVKNLR 624
Query: 559 VCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
VC DCHSA KLIS++ REII+RD R+HHFK+G CSC+D+W
Sbjct: 625 VCDDCHSATKLISQIFDREIIVRDRVRYHHFKNGTCSCKDFW 666
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 160/333 (48%), Gaps = 50/333 (15%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDM 62
E +VV W M+ GY++ G++ A LF QMP KN+ SW VM+ G + + DAR+LFD
Sbjct: 194 ESDVVCWNTMIDGYLKCGVLEAAKGLFAQMPVKNIGSWNVMINGLAKGGNLGDARKLFDE 253
Query: 63 MPEKDVVAQTNMVLGYCQDGRVDEGREIFDEM------PKKNVISWTTMISGYVNNNRID 116
M E+D ++ ++MV GY GR E EIF +M P + ++S ++++ N ID
Sbjct: 254 MSERDEISWSSMVDGYISAGRYKEALEIFQQMQREETRPGRFILS--SVLAACSNIGAID 311
Query: 117 VARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLG 172
R + + + V TA+L Y +CGR+ WE+F+ M + + N+MI GL
Sbjct: 312 QGRWVHAYLKRNSIKLDAVLGTALLDMYAKCGRLDMGWEVFEEMKEREIFTWNAMIGGLA 371
Query: 173 QNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLIS 232
+G + A ++LF+ +Q+ ++ N +L+
Sbjct: 372 IHGRAEDA-------------------------------LELFSKLQEGRMKPNGITLVG 400
Query: 233 VLSVCASLASLDHGRQVHAQLVRCQFDVDVYVA--SVLITMYIKCGELVKGKLIFDNFAS 290
VL+ CA +D G ++ Q +R + VD + ++ + + G + + + ++
Sbjct: 401 VLTACAHAGFVDKGLRIF-QTMREFYGVDPELEHYGCMVDLLGRSGLFSEAEDLINSMPM 459
Query: 291 K-DIVMWNSIISG---YAQYGLGEKSLKVFHEM 319
K + +W +++ + + L E+ K+ E+
Sbjct: 460 KPNAAVWGALLGACRIHGNFDLAERVGKILLEL 492
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 111/235 (47%), Gaps = 17/235 (7%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MP +N+ SW M+ G + G + +A LF +M E++ +SW+ M+ G+I R +A +F
Sbjct: 223 MPVKNIGSWNVMINGLAKGGNLGDARKLFDEMSERDEISWSSMVDGYISAGRYKEALEIF 282
Query: 61 DMMPEKDVVAQ---TNMVLGYCQD-GRVDEGREIFDEMPKKNV----ISWTTMISGYVNN 112
M ++ + VL C + G +D+GR + + + ++ + T ++ Y
Sbjct: 283 QQMQREETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNSIKLDAVLGTALLDMYAKC 342
Query: 113 NRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGL- 171
R+D+ ++FE M E+ +W AM+ G GR +DA ELF + + + ++G+
Sbjct: 343 GRLDMGWEVFEEMKEREIFTWNAMIGGLAIHGRAEDALELFSKLQEGRMKPNGITLVGVL 402
Query: 172 ---GQNGEVQKARVVFDQMRE-----KDDATWSGMIKVYERKGYELEVIDLFTLM 218
G V K +F MRE + + M+ + R G E DL M
Sbjct: 403 TACAHAGFVDKGLRIFQTMREFYGVDPELEHYGCMVDLLGRSGLFSEAEDLINSM 457
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 101/231 (43%), Gaps = 19/231 (8%)
Query: 239 SLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIK--CGELVKGKLIFDNFASKDIVMW 296
S+ SL + Q+HA ++R D YV+ L+ Y +F + + ++ +W
Sbjct: 42 SITSLQYLTQLHALVLRSGHFQDHYVSGALLKCYANPHFSNFDFALKVFSSIPNPNVFIW 101
Query: 297 NSIISGYAQYGLGEKSLKVFHEMFSSGVM-----PDDVTLVGVLSACSYTGKVKEGREIF 351
N +I G + K+F ++ G M P+ T + ACS V+EGR+I
Sbjct: 102 NIVIKGCLENN------KLFKAIYFYGRMVIDARPNKFTYPTLFKACSVAQAVQEGRQIH 155
Query: 352 ESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMK 411
+ K+ + + + + G++EDA K+ + E D + W +++ ++K
Sbjct: 156 GHV-VKHGIGSDVHIKSAGIQMYASFGRLEDARKMFYSG--ESDVVCWNTMIDG---YLK 209
Query: 412 LDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVI 462
+ E A Q+ KN G + ++ N A G D +L M +R+ I
Sbjct: 210 CGVLEAAKGLFAQMPVKNIGSWNVMINGLAKGGNLGDARKLFDEMSERDEI 260
>gi|224141765|ref|XP_002324235.1| predicted protein [Populus trichocarpa]
gi|222865669|gb|EEF02800.1| predicted protein [Populus trichocarpa]
Length = 736
Score = 468 bits (1205), Expect = e-129, Method: Compositional matrix adjust.
Identities = 242/578 (41%), Positives = 346/578 (59%), Gaps = 43/578 (7%)
Query: 65 EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEV 124
E + T+++ Y Q+G + R +FD+ ++ +S+T +I+GY + +D AR+LF+
Sbjct: 160 EHNAFVHTSLINMYAQNGELVNARLVFDKSSMRDAVSFTALITGYASKGFLDEARELFDE 219
Query: 125 MPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMIL--------------- 169
+P ++ VSW AM+ GY Q GR+++A F+ M V + S +L
Sbjct: 220 IPVRDVVSWNAMISGYAQSGRVEEAMAFFEEMRRAKVTPNVSTMLSVLSACAQSGSSLQL 279
Query: 170 -----------GLGQN--------------GEVQKARVVFDQMREKDDATWSGMIKVYER 204
GLG N G++++A +F+++++K+ +W+ MI Y
Sbjct: 280 GNWVRSWIEDRGLGSNIRLVNGLIDMYVKCGDLEEASNLFEKIQDKNVVSWNVMIGGYTH 339
Query: 205 KGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYV 264
E + LF M + + N + +S+L CA+L +LD G+ VHA + + + V
Sbjct: 340 MSCYKEALGLFRRMMQSNIDPNDVTFLSILPACANLGALDLGKWVHAYVDKNMKSMKNTV 399
Query: 265 A--SVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSS 322
A + LI MY KCG+L K IFD +K + WN++ISG+A +G + +L +F M S
Sbjct: 400 ALWTSLIDMYAKCGDLAVAKRIFDCMNTKSLATWNAMISGFAMHGHTDTALGLFSRMTSE 459
Query: 323 GVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVED 382
G +PDD+T VGVL+AC + G + GR F SM Y V PK HY CM+DL GRAG ++
Sbjct: 460 GFVPDDITFVGVLTACKHAGLLSLGRRYFSSMIQDYKVSPKLPHYGCMIDLFGRAGLFDE 519
Query: 383 AMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYAS 442
A L++ M +PD IW SLLGACR H +++LAE AK L +LEP+N Y+LLSNIYA
Sbjct: 520 AETLVKNMEMKPDGAIWCSLLGACRIHRRIELAESVAKHLFELEPENPSAYVLLSNIYAG 579
Query: 443 QGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGG 502
GR+ DVA++R + + K PGCS IEV+ VH F D V HP+ I +ML++I
Sbjct: 580 AGRWEDVAKIRTRLNDNRMKKVPGCSSIEVDSVVHEFLVGDKV-HPQSNEIYKMLDEIDM 638
Query: 503 LLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGD 562
L +AG+ PD+S VL+D+DEE K L +HSEKLA+A+GL+ G IR+MKNLRVCG+
Sbjct: 639 RLEKAGFVPDTSEVLYDMDEEWKEGVLSHHSEKLAIAFGLISTKPGTTIRIMKNLRVCGN 698
Query: 563 CHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
CHSA KLISK+ REII RD NRFHHFKDG CSC+DYW
Sbjct: 699 CHSATKLISKIFNREIIARDRNRFHHFKDGSCSCKDYW 736
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 108/468 (23%), Positives = 184/468 (39%), Gaps = 122/468 (26%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDM 62
E N T+++ Y + G + A +F + ++ VS+T ++ G+ +D+AR LFD
Sbjct: 160 EHNAFVHTSLINMYAQNGELVNARLVFDKSSMRDAVSFTALITGYASKGFLDEARELFDE 219
Query: 63 MPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVI---------------------- 100
+P +DVV+ M+ GY Q GRV+E F+EM + V
Sbjct: 220 IPVRDVVSWNAMISGYAQSGRVEEAMAFFEEMRRAKVTPNVSTMLSVLSACAQSGSSLQL 279
Query: 101 -----SW-------------TTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQ 142
SW +I YV ++ A LFE + +KN VSW M+ GYT
Sbjct: 280 GNWVRSWIEDRGLGSNIRLVNGLIDMYVKCGDLEEASNLFEKIQDKNVVSWNVMIGGYTH 339
Query: 143 CGRIQDAWELFKAM----------------------------------------PMKSVV 162
++A LF+ M MK+ V
Sbjct: 340 MSCYKEALGLFRRMMQSNIDPNDVTFLSILPACANLGALDLGKWVHAYVDKNMKSMKNTV 399
Query: 163 AS-NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKE 221
A S+I + G++ A+ +FD M K ATW+ MI + G+ + LF+ M E
Sbjct: 400 ALWTSLIDMYAKCGDLAVAKRIFDCMNTKSLATWNAMISGFAMHGHTDTALGLFSRMTSE 459
Query: 222 GVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKG 281
G + + + VL+ C L GR+ + +++
Sbjct: 460 GFVPDDITFVGVLTACKHAGLLSLGRRYFSSMIQ-------------------------- 493
Query: 282 KLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYT 341
D S + + +I + + GL +++ + M + PD +L AC
Sbjct: 494 ----DYKVSPKLPHYGCMIDLFGRAGLFDEAETLVKNM---EMKPDGAIWCSLLGAC--- 543
Query: 342 GKVKEGREIFESMKSKYLVEPKTEH---YACMVDLLGRAGQVEDAMKL 386
++ E+ ES+ +K+L E + E+ Y + ++ AG+ ED K+
Sbjct: 544 -RIHRRIELAESV-AKHLFELEPENPSAYVLLSNIYAGAGRWEDVAKI 589
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 110/469 (23%), Positives = 178/469 (37%), Gaps = 124/469 (26%)
Query: 115 IDVARKLFEVMPEKNEVSWTAMLMG--------------------------------YTQ 142
+ A LF+ + N V W M+ G +
Sbjct: 78 LSYALSLFKTIRNPNHVIWNHMIRGLSSSESPFLALEYYVHMISSGTEPNEYTFPSIFKS 137
Query: 143 CGRIQDAWE-------LFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQ--MRE---- 189
C +I+ A E + K + S+I QNGE+ AR+VFD+ MR+
Sbjct: 138 CTKIRGAHEGKQVHAHVLKLGLEHNAFVHTSLINMYAQNGELVNARLVFDKSSMRDAVSF 197
Query: 190 -------------------------KDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVR 224
+D +W+ MI Y + G E + F M++ V
Sbjct: 198 TALITGYASKGFLDEARELFDEIPVRDVVSWNAMISGYAQSGRVEEAMAFFEEMRRAKVT 257
Query: 225 VNFPSLISVLSVCA-SLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKL 283
N +++SVLS CA S +SL G V + + ++ + + LI MY+KCG+L +
Sbjct: 258 PNVSTMLSVLSACAQSGSSLQLGNWVRSWIEDRGLGSNIRLVNGLIDMYVKCGDLEEASN 317
Query: 284 IFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGK 343
+F+ K++V WN +I GY +++L +F M S + P+DVT + +L AC+ G
Sbjct: 318 LFEKIQDKNVVSWNVMIGGYTHMSCYKEALGLFRRMMQSNIDPNDVTFLSILPACANLGA 377
Query: 344 VKEG-------------------------------------REIFESMKSKYLVEPKTEH 366
+ G + IF+ M +K L
Sbjct: 378 LDLGKWVHAYVDKNMKSMKNTVALWTSLIDMYAKCGDLAVAKRIFDCMNTKSLAT----- 432
Query: 367 YACMVDLLGRAGQVEDAMKLIEAMP---FEPDAIIWGSLLGACRTHMKLDLAEVAAKKLL 423
+ M+ G + A+ L M F PD I + +L AC+ L L ++
Sbjct: 433 WNAMISGFAMHGHTDTALGLFSRMTSEGFVPDDITFVGVLTACKHAGLLSLGRRYFSSMI 492
Query: 424 Q---LEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSW 469
Q + PK Y + +++ G F + L KNM +KP G W
Sbjct: 493 QDYKVSPK-LPHYGCMIDLFGRAGLFDEAETLVKNME----MKPDGAIW 536
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 121/272 (44%), Gaps = 33/272 (12%)
Query: 170 GLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPS 229
+ +G++ A +F +R + W+ MI+ ++ + M G N +
Sbjct: 71 AVSPHGDLSYALSLFKTIRNPNHVIWNHMIRGLSSSESPFLALEYYVHMISSGTEPNEYT 130
Query: 230 LISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDN-- 287
S+ C + G+QVHA +++ + + +V + LI MY + GELV +L+FD
Sbjct: 131 FPSIFKSCTKIRGAHEGKQVHAHVLKLGLEHNAFVHTSLINMYAQNGELVNARLVFDKSS 190
Query: 288 -------------FASK----------------DIVMWNSIISGYAQYGLGEKSLKVFHE 318
+ASK D+V WN++ISGYAQ G E+++ F E
Sbjct: 191 MRDAVSFTALITGYASKGFLDEARELFDEIPVRDVVSWNAMISGYAQSGRVEEAMAFFEE 250
Query: 319 MFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAG 378
M + V P+ T++ VLSAC+ +G + S + ++D+ + G
Sbjct: 251 MRRAKVTPNVSTMLSVLSACAQSGSSLQLGNWVRSWIEDRGLGSNIRLVNGLIDMYVKCG 310
Query: 379 QVEDAMKLIEAMPFEPDAIIWGSLLGACRTHM 410
+E+A L E + + + + W ++G THM
Sbjct: 311 DLEEASNLFEKIQ-DKNVVSWNVMIGG-YTHM 340
Score = 45.8 bits (107), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 83/205 (40%), Gaps = 18/205 (8%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDM 62
+ V WT+++ Y + G + A +F M K++ +W M+ GF D A LF
Sbjct: 396 KNTVALWTSLIDMYAKCGDLAVAKRIFDCMNTKSLATWNAMISGFAMHGHTDTALGLFSR 455
Query: 63 MPEKDVVAQTNM---VLGYCQD-GRVDEGREIFDEMPKKNVIS-----WTTMISGYVNNN 113
M + V VL C+ G + GR F M + +S + MI +
Sbjct: 456 MTSEGFVPDDITFVGVLTACKHAGLLSLGRRYFSSMIQDYKVSPKLPHYGCMIDLFGRAG 515
Query: 114 RIDVARKLFEVMPEKNEVS-WTAMLMGYTQCGRIQDA-------WELFKAMPMKSVVASN 165
D A L + M K + + W ++L RI+ A +EL P V+ SN
Sbjct: 516 LFDEAETLVKNMEMKPDGAIWCSLLGACRIHRRIELAESVAKHLFELEPENPSAYVLLSN 575
Query: 166 SMILGLGQNGEVQKARVVFDQMREK 190
+ G G+ +V K R + R K
Sbjct: 576 -IYAGAGRWEDVAKIRTRLNDNRMK 599
>gi|359497772|ref|XP_003635637.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 629
Score = 468 bits (1204), Expect = e-129, Method: Compositional matrix adjust.
Identities = 240/625 (38%), Positives = 385/625 (61%), Gaps = 31/625 (4%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM------PEK----NVVSWTVMLGGFIRD 50
MPERN+V+WT M+ + + G +A LF M P++ +V+S LG
Sbjct: 11 MPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALG 70
Query: 51 SRIDDARRLFDMMPEKDVVAQTNMVLGYCQ---DGRVDEGREIFDEMPKKNVISWTTMIS 107
++ R+ + DV ++V Y + DG VD+ R++F++MP+ NV+SWT +I+
Sbjct: 71 KQLHS--RVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIIT 128
Query: 108 GYVNNNRIDV-ARKLFEVMPE----KNEVSWTAMLMGYTQCGRIQDAW--ELFKAMPMKS 160
Y + D A +LF M N S++++L CG + D + E + +K
Sbjct: 129 AYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKA---CGNLSDPYTGEQVYSYAVKL 185
Query: 161 VVAS-----NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLF 215
+AS NS+I ++G ++ AR FD + EK+ +++ ++ Y + E LF
Sbjct: 186 GIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLF 245
Query: 216 TLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKC 275
+ G+ ++ + S+LS AS+ ++ G Q+H +L++ + + + + LI+MY +C
Sbjct: 246 NEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRC 305
Query: 276 GELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVL 335
G + +F+ ++++ W S+I+G+A++G ++L++FH+M +G P+++T V VL
Sbjct: 306 GNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVL 365
Query: 336 SACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPD 395
SACS+ G + EG++ F SM ++ + P+ EHYACMVDLLGR+G + +AM+ I +MP D
Sbjct: 366 SACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMAD 425
Query: 396 AIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKN 455
A++W +LLGACR H +L AA+ +L+ EP + YILLSN++AS G++ DV ++RK+
Sbjct: 426 ALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKS 485
Query: 456 MRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSF 515
M++RN+IK GCSWIEVE +VH F + SHP+ I + L+++ ++E GY PD+ F
Sbjct: 486 MKERNLIKEAGCSWIEVENRVHRFHVGE-TSHPQAWQIYQELDQLASKIKEMGYIPDTDF 544
Query: 516 VLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMG 575
VLHD++EE+K L HSEK+AVA+GL+ + PIR+ KNLRVCGDCH+AIK IS G
Sbjct: 545 VLHDIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIRIFKNLRVCGDCHTAIKYISMATG 604
Query: 576 REIILRDANRFHHFKDGLCSCRDYW 600
REI++RD+NRFHH K+G+CSC DYW
Sbjct: 605 REIVVRDSNRFHHIKNGVCSCNDYW 629
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 102/394 (25%), Positives = 172/394 (43%), Gaps = 52/394 (13%)
Query: 118 ARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMK---------SVVASNSMI 168
A K+F+ MPE+N V+WT M+ + Q G +DA +LF M + S V S
Sbjct: 4 AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 63
Query: 169 LGL---------------------------------GQNGEVQKARVVFDQMREKDDATW 195
LGL +G V +R VF+QM E + +W
Sbjct: 64 LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSW 123
Query: 196 SGMIKVYERKG-YELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLV 254
+ +I Y + G + E I+LF M +R N S SVL C +L+ G QV++ V
Sbjct: 124 TAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAV 183
Query: 255 RCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLK 314
+ V + LI+MY + G + + FD K++V +N+I+ GYA+ E++
Sbjct: 184 KLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFL 243
Query: 315 VFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIF-ESMKSKYLVEPKTEHYAC--MV 371
+F+E+ +G+ T +LS + G + +G +I +K Y K+ C ++
Sbjct: 244 LFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGY----KSNQCICNALI 299
Query: 372 DLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPK-NA 430
+ R G +E A ++ M + + I W S++ H A K+L+ K N
Sbjct: 300 SMYSRCGNIEAAFQVFNEME-DRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNE 358
Query: 431 GPYILLSNIYASQGRFHDVAELRKNMRKRNVIKP 464
Y+ + + + G + + +M K + I P
Sbjct: 359 ITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVP 392
>gi|225423499|ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 738
Score = 468 bits (1204), Expect = e-129, Method: Compositional matrix adjust.
Identities = 255/646 (39%), Positives = 366/646 (56%), Gaps = 49/646 (7%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQM----PEKNVVSWTVMLGGFIRDSRIDDARR 58
+ N W M+RG A + +M E N ++ +L + + ++
Sbjct: 94 QPNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQ 153
Query: 59 L----FDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNR 114
+ + E D T+++ Y Q+G + +F + ++ +S+T +I+GY
Sbjct: 154 IHGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGC 213
Query: 115 IDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMIL----- 169
+D AR+LFE +P ++ VSW AM+ GY Q GR ++A F+ M +V + S ++
Sbjct: 214 LDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSA 273
Query: 170 --------------------GLGQN--------------GEVQKARVVFDQMREKDDATW 195
GLG N G++ KAR +F+ + EKD +W
Sbjct: 274 CAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISW 333
Query: 196 SGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVR 255
+ MI Y E + LF MQ+ V N + +S+L CA L +LD G+ +HA + +
Sbjct: 334 NVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDK 393
Query: 256 CQFDV-DVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLK 314
+ + + + LI MY KCG + K +F K + WN++ISG A +G +L+
Sbjct: 394 KFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALE 453
Query: 315 VFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLL 374
+F +M G PDD+T VGVLSACS+ G V+ GR+ F SM Y + PK +HY CM+DLL
Sbjct: 454 LFRQMRDEGFEPDDITFVGVLSACSHAGLVELGRQCFSSMVEDYDISPKLQHYGCMIDLL 513
Query: 375 GRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYI 434
GRAG ++A L++ M +PD IWGSLLGACR H ++L E AAK L +LEP+N G Y+
Sbjct: 514 GRAGLFDEAEALMKNMEMKPDGAIWGSLLGACRVHGNVELGEFAAKHLFELEPENPGAYV 573
Query: 435 LLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIM 494
LLSNIYA+ GR+ DVA +R + + + K PGCS IEV+ VH F D V H + I
Sbjct: 574 LLSNIYATAGRWDDVARIRTKLNDKGMKKVPGCSSIEVDSVVHEFLVGDKV-HEQSQDIY 632
Query: 495 RMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVM 554
+ML++I LL +AG+ PD+S VL+D+DEE K SL +HSEKLA+A+GL+ IR++
Sbjct: 633 KMLDEIDQLLEKAGHVPDTSEVLYDMDEEWKEGSLSHHSEKLAIAFGLISTKPETTIRIV 692
Query: 555 KNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
KNLRVCG+CHSAIKLISK+ REII RD NRFHHFKDG CSC DYW
Sbjct: 693 KNLRVCGNCHSAIKLISKIFNREIIARDRNRFHHFKDGSCSCMDYW 738
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 106/463 (22%), Positives = 181/463 (39%), Gaps = 112/463 (24%)
Query: 114 RIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSV------------ 161
+ A LFE + + N+ W M+ G + A + + M + V
Sbjct: 81 NLSYALLLFESIEQPNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLK 140
Query: 162 -------------VASNSMILGL--------------GQNGEVQKARVV----------- 183
+ + + LGL QNGE+ A +V
Sbjct: 141 SCAKVGATQEGKQIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVS 200
Query: 184 --------------------FDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGV 223
F+++ +D +W+ MI Y + G E + F M++ V
Sbjct: 201 FTALITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANV 260
Query: 224 RVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKL 283
N ++++VLS CA SL+ G V + + ++ + + LI MY KCG+L K +
Sbjct: 261 APNESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARD 320
Query: 284 IFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGK 343
+F+ KDI+ WN +I GY+ +++L +F +M S V P+DVT V +L AC+Y G
Sbjct: 321 LFEGICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGA 380
Query: 344 VKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMP------------ 391
+ G+ I + K+L T + ++D+ + G +E A ++ M
Sbjct: 381 LDLGKWIHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMIS 440
Query: 392 ----------------------FEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQ---LE 426
FEPD I + +L AC ++L +++ +
Sbjct: 441 GLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSACSHAGLVELGRQCFSSMVEDYDIS 500
Query: 427 PKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSW 469
PK Y + ++ G F + L KNM +KP G W
Sbjct: 501 PK-LQHYGCMIDLLGRAGLFDEAEALMKNME----MKPDGAIW 538
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 91/349 (26%), Positives = 162/349 (46%), Gaps = 38/349 (10%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVV---------------SWTVMLG 45
+P R+ VSW AM+ GY + G EA F +M NV S ++ LG
Sbjct: 224 IPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSLELG 283
Query: 46 GFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTM 105
++R S I+D ++ + V A +M Y + G +D+ R++F+ + +K++ISW M
Sbjct: 284 NWVR-SWIEDHGLGSNL---RLVNALIDM---YSKCGDLDKARDLFEGICEKDIISWNVM 336
Query: 106 ISGYVNNNRIDVARKLFEVMP----EKNEVSWTAML-----MGYTQCGRIQDAWELFKAM 156
I GY + N A LF M E N+V++ ++L +G G+ A+ K +
Sbjct: 337 IGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFL 396
Query: 157 PMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFT 216
+ + S+I + G ++ A+ VF M+ K +W+ MI G+ ++LF
Sbjct: 397 GLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALELFR 456
Query: 217 LMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVA--SVLITMYIK 274
M+ EG + + + VLS C+ ++ GRQ + +V +D+ + +I + +
Sbjct: 457 QMRDEGFEPDDITFVGVLSACSHAGLVELGRQCFSSMVE-DYDISPKLQHYGCMIDLLGR 515
Query: 275 CGELVKGKLIFDNFASK-DIVMWNSIISGYAQYG---LGEKSLKVFHEM 319
G + + + N K D +W S++ +G LGE + K E+
Sbjct: 516 AGLFDEAEALMKNMEMKPDGAIWGSLLGACRVHGNVELGEFAAKHLFEL 564
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 122/268 (45%), Gaps = 34/268 (12%)
Query: 175 GEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVL 234
G + A ++F+ + + + W+ MI+ + ID + M GV N + +L
Sbjct: 80 GNLSYALLLFESIEQPNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLL 139
Query: 235 SVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLI---------- 284
CA + + G+Q+H +++ + D +V + LI MY + GEL +L+
Sbjct: 140 KSCAKVGATQEGKQIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAV 199
Query: 285 ---------------------FDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSG 323
F+ +D V WN++I+GYAQ G E++L F EM +
Sbjct: 200 SFTALITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRAN 259
Query: 324 VMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDA 383
V P++ T+V VLSAC+ +G ++ G + S + + ++D+ + G ++ A
Sbjct: 260 VAPNESTMVTVLSACAQSGSLELGNWV-RSWIEDHGLGSNLRLVNALIDMYSKCGDLDKA 318
Query: 384 MKLIEAMPFEPDAIIWGSLLGACRTHMK 411
L E + E D I W ++G +HM
Sbjct: 319 RDLFEGI-CEKDIISWNVMIGG-YSHMN 344
>gi|296090723|emb|CBI41122.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 468 bits (1203), Expect = e-129, Method: Compositional matrix adjust.
Identities = 240/625 (38%), Positives = 385/625 (61%), Gaps = 31/625 (4%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM------PEK----NVVSWTVMLGGFIRD 50
MPERN+V+WT M+ + + G +A LF M P++ +V+S LG
Sbjct: 16 MPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALG 75
Query: 51 SRIDDARRLFDMMPEKDVVAQTNMVLGYCQ---DGRVDEGREIFDEMPKKNVISWTTMIS 107
++ R+ + DV ++V Y + DG VD+ R++F++MP+ NV+SWT +I+
Sbjct: 76 KQLHS--RVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIIT 133
Query: 108 GYVNNNRIDV-ARKLFEVMPE----KNEVSWTAMLMGYTQCGRIQDAW--ELFKAMPMKS 160
Y + D A +LF M N S++++L CG + D + E + +K
Sbjct: 134 AYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKA---CGNLSDPYTGEQVYSYAVKL 190
Query: 161 VVAS-----NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLF 215
+AS NS+I ++G ++ AR FD + EK+ +++ ++ Y + E LF
Sbjct: 191 GIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLF 250
Query: 216 TLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKC 275
+ G+ ++ + S+LS AS+ ++ G Q+H +L++ + + + + LI+MY +C
Sbjct: 251 NEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRC 310
Query: 276 GELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVL 335
G + +F+ ++++ W S+I+G+A++G ++L++FH+M +G P+++T V VL
Sbjct: 311 GNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVL 370
Query: 336 SACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPD 395
SACS+ G + EG++ F SM ++ + P+ EHYACMVDLLGR+G + +AM+ I +MP D
Sbjct: 371 SACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMAD 430
Query: 396 AIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKN 455
A++W +LLGACR H +L AA+ +L+ EP + YILLSN++AS G++ DV ++RK+
Sbjct: 431 ALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKS 490
Query: 456 MRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSF 515
M++RN+IK GCSWIEVE +VH F + SHP+ I + L+++ ++E GY PD+ F
Sbjct: 491 MKERNLIKEAGCSWIEVENRVHRFHVGE-TSHPQAWQIYQELDQLASKIKEMGYIPDTDF 549
Query: 516 VLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMG 575
VLHD++EE+K L HSEK+AVA+GL+ + PIR+ KNLRVCGDCH+AIK IS G
Sbjct: 550 VLHDIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIRIFKNLRVCGDCHTAIKYISMATG 609
Query: 576 REIILRDANRFHHFKDGLCSCRDYW 600
REI++RD+NRFHH K+G+CSC DYW
Sbjct: 610 REIVVRDSNRFHHIKNGVCSCNDYW 634
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 102/394 (25%), Positives = 172/394 (43%), Gaps = 52/394 (13%)
Query: 118 ARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMK---------SVVASNSMI 168
A K+F+ MPE+N V+WT M+ + Q G +DA +LF M + S V S
Sbjct: 9 AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 68
Query: 169 LGL---------------------------------GQNGEVQKARVVFDQMREKDDATW 195
LGL +G V +R VF+QM E + +W
Sbjct: 69 LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSW 128
Query: 196 SGMIKVYERKG-YELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLV 254
+ +I Y + G + E I+LF M +R N S SVL C +L+ G QV++ V
Sbjct: 129 TAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAV 188
Query: 255 RCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLK 314
+ V + LI+MY + G + + FD K++V +N+I+ GYA+ E++
Sbjct: 189 KLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFL 248
Query: 315 VFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIF-ESMKSKYLVEPKTEHYAC--MV 371
+F+E+ +G+ T +LS + G + +G +I +K Y K+ C ++
Sbjct: 249 LFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGY----KSNQCICNALI 304
Query: 372 DLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPK-NA 430
+ R G +E A ++ M + + I W S++ H A K+L+ K N
Sbjct: 305 SMYSRCGNIEAAFQVFNEME-DRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNE 363
Query: 431 GPYILLSNIYASQGRFHDVAELRKNMRKRNVIKP 464
Y+ + + + G + + +M K + I P
Sbjct: 364 ITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVP 397
>gi|449435966|ref|XP_004135765.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 666
Score = 468 bits (1203), Expect = e-129, Method: Compositional matrix adjust.
Identities = 244/582 (41%), Positives = 357/582 (61%), Gaps = 13/582 (2%)
Query: 28 LFWQMPEKNVVSWTVMLGGFIRDSRIDDA-----RRLFDMMPEKDVVAQTNMVLGYCQDG 82
+F +P NV W +++ G + ++++ A R + D P K Q
Sbjct: 89 VFSSIPNPNVFIWNIVIKGCLENNKLFKAIYFYGRMVIDARPNKFTYPTLFKACSVAQ-- 146
Query: 83 RVDEGREIFDEMPKKNVISWTTMISG----YVNNNRIDVARKLFEVMPEKNEVSWTAMLM 138
V EGR+I + K + S + S Y + R++ ARK+F E + V W M+
Sbjct: 147 AVQEGRQIHGHVVKHGIGSDVHIKSAGIHMYASFGRLEDARKMF-YSGESDVVCWNTMID 205
Query: 139 GYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGM 198
GY +CG ++ A LF MP+K++ + N MI GL + G + AR +FD+M E+D+ +WS M
Sbjct: 206 GYLKCGVLEAAKGLFAQMPVKNIGSWNVMINGLAKGGNLGDARKLFDEMSERDEISWSSM 265
Query: 199 IKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQF 258
+ Y G E +++F MQ+E R L SVL+ C+++ ++D GR VHA L R
Sbjct: 266 VDGYISAGRYKEALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNSI 325
Query: 259 DVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHE 318
+D + + L+ MY KCG L G +F+ ++I WN++I G A +G E +L++F +
Sbjct: 326 KLDAVLGTALLDMYAKCGRLDMGWEVFEEMKEREIFTWNAMIGGLAIHGRAEDALELFSK 385
Query: 319 MFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAG 378
+ + P+ +TLVGVL+AC++ G V +G IF++M+ Y V+P+ EHY CMVDLLGR+G
Sbjct: 386 LQEGRMKPNGITLVGVLTACAHAGFVDKGLRIFQTMREFYGVDPELEHYGCMVDLLGRSG 445
Query: 379 QVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSN 438
+A LI +MP +P+A +WG+LLGACR H DLAE K LL+LEP+N+G Y+LLSN
Sbjct: 446 LFSEAEDLINSMPMKPNAAVWGALLGACRIHGNFDLAERVGKILLELEPQNSGRYVLLSN 505
Query: 439 IYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLE 498
IYA GRF DV+++RK M+ R + PG S +++ VH F D SHP+ I R L+
Sbjct: 506 IYAKVGRFDDVSKIRKLMKDRGIKTVPGVSIVDLNGTVHEFKMGDG-SHPQMKEIYRKLK 564
Query: 499 KIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLR 558
I L+ AG+ PD+S VL D+DEEEK ++ YHSEKLA+A+GL+ G I ++KNLR
Sbjct: 565 IIKERLQMAGHSPDTSQVLFDIDEEEKETAVNYHSEKLAIAFGLINTLPGKRIHIVKNLR 624
Query: 559 VCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
VC DCHSA KLIS++ REII+RD R+HHFK+G CSC+D+W
Sbjct: 625 VCDDCHSATKLISQIFDREIIVRDRVRYHHFKNGTCSCKDFW 666
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 160/333 (48%), Gaps = 50/333 (15%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDM 62
E +VV W M+ GY++ G++ A LF QMP KN+ SW VM+ G + + DAR+LFD
Sbjct: 194 ESDVVCWNTMIDGYLKCGVLEAAKGLFAQMPVKNIGSWNVMINGLAKGGNLGDARKLFDE 253
Query: 63 MPEKDVVAQTNMVLGYCQDGRVDEGREIFDEM------PKKNVISWTTMISGYVNNNRID 116
M E+D ++ ++MV GY GR E EIF +M P + ++S ++++ N ID
Sbjct: 254 MSERDEISWSSMVDGYISAGRYKEALEIFQQMQREETRPGRFILS--SVLAACSNIGAID 311
Query: 117 VARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLG 172
R + + + V TA+L Y +CGR+ WE+F+ M + + N+MI GL
Sbjct: 312 QGRWVHAYLKRNSIKLDAVLGTALLDMYAKCGRLDMGWEVFEEMKEREIFTWNAMIGGLA 371
Query: 173 QNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLIS 232
+G + A ++LF+ +Q+ ++ N +L+
Sbjct: 372 IHGRAEDA-------------------------------LELFSKLQEGRMKPNGITLVG 400
Query: 233 VLSVCASLASLDHGRQVHAQLVRCQFDVDVYVA--SVLITMYIKCGELVKGKLIFDNFAS 290
VL+ CA +D G ++ Q +R + VD + ++ + + G + + + ++
Sbjct: 401 VLTACAHAGFVDKGLRIF-QTMREFYGVDPELEHYGCMVDLLGRSGLFSEAEDLINSMPM 459
Query: 291 K-DIVMWNSIISG---YAQYGLGEKSLKVFHEM 319
K + +W +++ + + L E+ K+ E+
Sbjct: 460 KPNAAVWGALLGACRIHGNFDLAERVGKILLEL 492
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 111/235 (47%), Gaps = 17/235 (7%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MP +N+ SW M+ G + G + +A LF +M E++ +SW+ M+ G+I R +A +F
Sbjct: 223 MPVKNIGSWNVMINGLAKGGNLGDARKLFDEMSERDEISWSSMVDGYISAGRYKEALEIF 282
Query: 61 DMMPEKDVVAQ---TNMVLGYCQD-GRVDEGREIFDEMPKKNV----ISWTTMISGYVNN 112
M ++ + VL C + G +D+GR + + + ++ + T ++ Y
Sbjct: 283 QQMQREETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNSIKLDAVLGTALLDMYAKC 342
Query: 113 NRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGL- 171
R+D+ ++FE M E+ +W AM+ G GR +DA ELF + + + ++G+
Sbjct: 343 GRLDMGWEVFEEMKEREIFTWNAMIGGLAIHGRAEDALELFSKLQEGRMKPNGITLVGVL 402
Query: 172 ---GQNGEVQKARVVFDQMRE-----KDDATWSGMIKVYERKGYELEVIDLFTLM 218
G V K +F MRE + + M+ + R G E DL M
Sbjct: 403 TACAHAGFVDKGLRIFQTMREFYGVDPELEHYGCMVDLLGRSGLFSEAEDLINSM 457
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 100/231 (43%), Gaps = 19/231 (8%)
Query: 239 SLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIK--CGELVKGKLIFDNFASKDIVMW 296
S+ SL + Q+H ++R D YV+ L+ Y +F + + ++ +W
Sbjct: 42 SITSLQYLTQLHGLVLRSGHFQDHYVSGALLKCYANPHFSNFDFALKVFSSIPNPNVFIW 101
Query: 297 NSIISGYAQYGLGEKSLKVFHEMFSSGVM-----PDDVTLVGVLSACSYTGKVKEGREIF 351
N +I G + K+F ++ G M P+ T + ACS V+EGR+I
Sbjct: 102 NIVIKGCLENN------KLFKAIYFYGRMVIDARPNKFTYPTLFKACSVAQAVQEGRQIH 155
Query: 352 ESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMK 411
+ K+ + + + + G++EDA K+ + E D + W +++ ++K
Sbjct: 156 GHV-VKHGIGSDVHIKSAGIHMYASFGRLEDARKMFYSG--ESDVVCWNTMIDG---YLK 209
Query: 412 LDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVI 462
+ E A Q+ KN G + ++ N A G D +L M +R+ I
Sbjct: 210 CGVLEAAKGLFAQMPVKNIGSWNVMINGLAKGGNLGDARKLFDEMSERDEI 260
>gi|296083884|emb|CBI24272.3| unnamed protein product [Vitis vinifera]
Length = 729
Score = 467 bits (1202), Expect = e-129, Method: Compositional matrix adjust.
Identities = 260/681 (38%), Positives = 376/681 (55%), Gaps = 103/681 (15%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM------PE-------------------- 34
M ERNV SWTA++ Y G E LF+ M P+
Sbjct: 71 MSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVG 130
Query: 35 KNVVSWTVMLGG-------------FIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQD 81
K+V + + +G FI+ R+D ARR F+ + KDV MV GY
Sbjct: 131 KDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSK 190
Query: 82 GRVDEGREIFDEMP----KKNVISWTTMIS---------------GY------------V 110
G + +F +M K N I+ + +S GY V
Sbjct: 191 GEFKKALNVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLV 250
Query: 111 NNNRID---------VARKLFEVMPEKNEVSWTAML--MGYTQCGRIQDAWELFKAMPMK 159
N+ +D VAR+ F ++ + + VSW AML G+TQ G + A E F+ M +
Sbjct: 251 GNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAVTGFTQYGDGKAALEFFQRMHI- 309
Query: 160 SVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQ 219
A VF ++ +D W+ +I + G + +DL M
Sbjct: 310 --------------------ACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMN 349
Query: 220 KEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELV 279
V VN +++S L C+ LA+L G+++H ++RC D ++ + LI MY +CG +
Sbjct: 350 LSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQ 409
Query: 280 KGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACS 339
K + IFD +D+V WN +IS Y +G G ++ +F + + G+ P+ +T +LSACS
Sbjct: 410 KSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSACS 469
Query: 340 YTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIW 399
++G ++EG + F+ MK++Y ++P E YACMVDLL RAGQ + ++ IE MPFEP+A +W
Sbjct: 470 HSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVW 529
Query: 400 GSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKR 459
GSLLGACR H DLAE AA+ L +LEP+++G Y+L++NIY++ GR+ D A++R M++R
Sbjct: 530 GSLLGACRIHCNPDLAEYAARYLFELEPQSSGNYVLMANIYSAAGRWEDAAKIRCLMKER 589
Query: 460 NVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHD 519
V KPPGCSWIEV++K+H F D SHP I +E + ++E GY PD++FVL D
Sbjct: 590 GVTKPPGCSWIEVKRKLHSFVVGD-TSHPLMEQISAKMESLYFDIKEIGYVPDTNFVLQD 648
Query: 520 VDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREII 579
VDE+EK SL HSEK+A+A+GL+ G P+R++KNLRVCGDCHSA K ISKV R+II
Sbjct: 649 VDEDEKEFSLCGHSEKIALAFGLISTTAGTPLRIIKNLRVCGDCHSATKFISKVEKRDII 708
Query: 580 LRDANRFHHFKDGLCSCRDYW 600
+RD RFHHF DG+CSC DYW
Sbjct: 709 MRDNYRFHHFVDGVCSCGDYW 729
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 95/384 (24%), Positives = 173/384 (45%), Gaps = 54/384 (14%)
Query: 78 YCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVM-PEKNEVSWTAM 136
YCQ G V++ R +FD+M ++NV SWT ++ Y + KLF +M E
Sbjct: 55 YCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVF 114
Query: 137 LMGYTQCGRI------QDAWELFKAMPMKSVVASNSMILGLG-QNGEVQKARVVFDQMRE 189
+ C + +D ++ ++ + IL + + G + AR F+++
Sbjct: 115 PKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEF 174
Query: 190 KDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQV 249
KD W+ M+ Y KG + +++F M EGV+ N ++ S +S C +L+ L HGR++
Sbjct: 175 KDVFMWNIMVSGYTSKGEFKKALNVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREI 234
Query: 250 HAQLVRC-QFDVDVYVASVLITMYIKCG--ELVKGKL----------------------- 283
H ++ + D D+ V + L+ Y KC E+ + K
Sbjct: 235 HGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAVTGFTQY 294
Query: 284 ------------------IFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVM 325
+F +++D+V+WNSIIS AQ G +L + EM S V
Sbjct: 295 GDGKAALEFFQRMHIACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVE 354
Query: 326 PDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMK 385
+ VT+V L ACS +++G+EI + + + ++ ++D+ GR G ++ + +
Sbjct: 355 VNTVTMVSALPACSKLAALRQGKEIHQFI-IRCGLDTCNFILNSLIDMYGRCGSIQKSRR 413
Query: 386 LIEAMPFEPDAIIWGSLLGACRTH 409
+ + MP + D + W ++ H
Sbjct: 414 IFDLMP-QRDLVSWNVMISVYGMH 436
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 92/178 (51%), Gaps = 10/178 (5%)
Query: 232 SVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASK 291
S+L C L +L G QVHAQLV DV ++ S L+ +Y + G + + +FD + +
Sbjct: 15 SILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSER 74
Query: 292 DIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIF 351
++ W +I+ Y G E+++K+F+ M + GV PD V ACS + G++++
Sbjct: 75 NVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVY 134
Query: 352 ESMKSKYLVEPKTEHYAC----MVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
+ Y++ E +C ++D+ + G+++ A + E + F+ D +W ++
Sbjct: 135 D-----YMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFK-DVFMWNIMVSG 186
>gi|224108621|ref|XP_002314911.1| predicted protein [Populus trichocarpa]
gi|222863951|gb|EEF01082.1| predicted protein [Populus trichocarpa]
Length = 743
Score = 467 bits (1202), Expect = e-129, Method: Compositional matrix adjust.
Identities = 248/679 (36%), Positives = 386/679 (56%), Gaps = 80/679 (11%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MP+ N SW M+ Y + G ++ +F MP ++ VSW ++ G++ + +A + +
Sbjct: 66 MPQPNSFSWNTMLSAYSKSGDLSTMQEIFSIMPNRDGVSWNSLISGYVCYGSVVEAVKTY 125
Query: 61 DMMPEKDV-----VAQTNMVLGYCQDGRVDEGREI------------------------- 90
+ M + V + + M+L G VD GR+I
Sbjct: 126 NSMMKDGVLNLNRITFSTMLLLVSSQGCVDLGRQIHGQIVKFGFGAYVFVGSSLVDMYAK 185
Query: 91 ----------FDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGY 140
FDE+ ++NV+ + TMI+G + + + +++LF M E++ +SWT M+ G
Sbjct: 186 MGLVSVASQVFDEVQERNVVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGL 245
Query: 141 TQCGRIQDAWELFKAM----------PMKSVVAS-------------NSMILGLGQNGEV 177
Q G +A +LF+ M SV+ + +++I+ G N V
Sbjct: 246 IQNGLEAEAMDLFRDMRQEGMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRSGYNHNV 305
Query: 178 ----------------QKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKE 221
+ A VF +M K+ +W+ M+ Y + G+ E + +F MQ+
Sbjct: 306 FVGSALVDMYCKCRSVRYAEAVFKRMANKNVVSWTAMLVGYGQNGFSEEAVRVFCDMQRN 365
Query: 222 GVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKG 281
G+ + +L SV+S CA+LASL+ G Q H Q + + V++ LIT+Y KCG +
Sbjct: 366 GIEPDDFTLGSVISSCANLASLEEGAQFHCQALVSGLISFITVSNALITLYGKCGSIEDS 425
Query: 282 KLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYT 341
+FD + +D V W +++SGYAQ+G +++ +F M G+ PD VT + VLSACS
Sbjct: 426 NQLFDEMSFRDEVSWTALVSGYAQFGKANETIDLFERMLVQGLKPDAVTFIAVLSACSRA 485
Query: 342 GKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGS 401
G V+ G++ FESM + + P ++HY CM+DL GRAG++E+A I MPF PD+I W +
Sbjct: 486 GLVERGQQYFESMLKDHGIIPFSDHYTCMIDLFGRAGRLEEAKNFINKMPFSPDSIGWAT 545
Query: 402 LLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNV 461
LL +CR + ++ + AA+ LL+L+P+N YILLS+IYA++G++ +VA+LR+ MR++
Sbjct: 546 LLSSCRLYGNEEIGKWAAESLLELDPQNPAGYILLSSIYAAKGKWSNVAQLRRGMREKGA 605
Query: 462 IKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVD 521
K PG SWI+ + KV++F+ D S P I LEK+ + E GY PD+S VLHDV+
Sbjct: 606 RKEPGFSWIKYKSKVYIFSADD-QSSPFSDQIYAELEKLNHKMIEEGYVPDASSVLHDVE 664
Query: 522 EEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILR 581
+ EK+ L +HSEKLA+A+GL+ +P G+PIRV+KNLRVCGDCH+A K ISK+ REI++R
Sbjct: 665 DSEKMKMLNHHSEKLAIAFGLLFIPHGLPIRVVKNLRVCGDCHNATKYISKISQREILVR 724
Query: 582 DANRFHHFKDGLCSCRDYW 600
DA RFH FKDG CSC D+W
Sbjct: 725 DAVRFHLFKDGTCSCGDFW 743
Score = 208 bits (530), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 115/404 (28%), Positives = 224/404 (55%), Gaps = 11/404 (2%)
Query: 9 WTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDV 68
+ ++ Y + G IT A +F +MP+ N SW ML + + + + +F +MP +D
Sbjct: 43 YNNLINAYSKLGNITYARHVFDKMPQPNSFSWNTMLSAYSKSGDLSTMQEIFSIMPNRDG 102
Query: 69 VAQTNMVLGYCQDGRVDEGREIFDEMPKKNV-----ISWTTMISGYVNNNRIDVARKLFE 123
V+ +++ GY G V E + ++ M K V I+++TM+ + +D+ R++
Sbjct: 103 VSWNSLISGYVCYGSVVEAVKTYNSMMKDGVLNLNRITFSTMLLLVSSQGCVDLGRQIHG 162
Query: 124 VMPEKNEVSW----TAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQK 179
+ + ++ ++++ Y + G + A ++F + ++VV N+MI GL ++G V+
Sbjct: 163 QIVKFGFGAYVFVGSSLVDMYAKMGLVSVASQVFDEVQERNVVMYNTMITGLLRSGMVKD 222
Query: 180 ARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCAS 239
++ +F M+E+D +W+ MI + G E E +DLF M++EG+ ++ + SVL+ C
Sbjct: 223 SKRLFHGMKERDSISWTTMITGLIQNGLEAEAMDLFRDMRQEGMAMDQYTFGSVLTACGG 282
Query: 240 LASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSI 299
L +L G+++H ++R ++ +V+V S L+ MY KC + + +F A+K++V W ++
Sbjct: 283 LRALKEGKEIHTLIIRSGYNHNVFVGSALVDMYCKCRSVRYAEAVFKRMANKNVVSWTAM 342
Query: 300 ISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYL 359
+ GY Q G E++++VF +M +G+ PDD TL V+S+C+ ++EG + L
Sbjct: 343 LVGYGQNGFSEEAVRVFCDMQRNGIEPDDFTLGSVISSCANLASLEEGAQFHCQALVSGL 402
Query: 360 VEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
+ T A ++ L G+ G +ED+ +L + M F D + W +L+
Sbjct: 403 ISFITVSNA-LITLYGKCGSIEDSNQLFDEMSFR-DEVSWTALV 444
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 104/445 (23%), Positives = 170/445 (38%), Gaps = 113/445 (25%)
Query: 90 IFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDA 149
I + + +I+ Y I AR +F+ MP+ N SW ML Y++ G +
Sbjct: 31 IIKSLTNPETFLYNNLINAYSKLGNITYARHVFDKMPQPNSFSWNTMLSAYSKSGDLSTM 90
Query: 150 WELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYEL 209
E+F MP + V+ NS+I G Y G +
Sbjct: 91 QEIFSIMPNRDGVSWNSLISG-------------------------------YVCYGSVV 119
Query: 210 EVIDLFTLMQKEGV-RVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVL 268
E + + M K+GV +N + ++L + +S +D GRQ+H Q+V+ F V+V S L
Sbjct: 120 EAVKTYNSMMKDGVLNLNRITFSTMLLLVSSQGCVDLGRQIHGQIVKFGFGAYVFVGSSL 179
Query: 269 ITMYIKCGELVKGKLIFDNFASKDIVM-------------------------------WN 297
+ MY K G + +FD +++VM W
Sbjct: 180 VDMYAKMGLVSVASQVFDEVQERNVVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWT 239
Query: 298 SIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREI------- 350
++I+G Q GL +++ +F +M G+ D T VL+AC +KEG+EI
Sbjct: 240 TMITGLIQNGLEAEAMDLFRDMRQEGMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRS 299
Query: 351 ----------------------------FESMKSKYLVEPKTEHYACMVDLLGRAGQVED 382
F+ M +K +V + M+ G+ G E+
Sbjct: 300 GYNHNVFVGSALVDMYCKCRSVRYAEAVFKRMANKNVVS-----WTAMLVGYGQNGFSEE 354
Query: 383 AMKLIEAMP---FEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSN- 438
A+++ M EPD GS++ +C L E A+ Q +I +SN
Sbjct: 355 AVRVFCDMQRNGIEPDDFTLGSVISSCANLASL---EEGAQFHCQALVSGLISFITVSNA 411
Query: 439 ---IYASQGRFHDVAELRKNMRKRN 460
+Y G D +L M R+
Sbjct: 412 LITLYGKCGSIEDSNQLFDEMSFRD 436
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/232 (20%), Positives = 100/232 (43%), Gaps = 14/232 (6%)
Query: 236 VCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVM 295
+C + +++H +++ + + ++ + LI Y K G + + +FD +
Sbjct: 14 LCCETRNQTQAKKLHCLIIKSLTNPETFLYNNLINAYSKLGNITYARHVFDKMPQPNSFS 73
Query: 296 WNSIISGYAQYGLGEKSLKVFHEMFSSGVMP--DDVTLVGVLSACSYTGKVKEGREIFES 353
WN+++S Y++ G L E+FS +MP D V+ ++S G V E + + S
Sbjct: 74 WNTMLSAYSKSG----DLSTMQEIFS--IMPNRDGVSWNSLISGYVCYGSVVEAVKTYNS 127
Query: 354 MKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKL---IEAMPFEPDAIIWGSLLGACRTHM 410
M ++ ++ M+ L+ G V+ ++ I F + SL+ +
Sbjct: 128 MMKDGVLNLNRITFSTMLLLVSSQGCVDLGRQIHGQIVKFGFGAYVFVGSSLVD---MYA 184
Query: 411 KLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVI 462
K+ L VA++ +++ +N Y + G D L M++R+ I
Sbjct: 185 KMGLVSVASQVFDEVQERNVVMYNTMITGLLRSGMVKDSKRLFHGMKERDSI 236
>gi|449436619|ref|XP_004136090.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Cucumis sativus]
Length = 723
Score = 467 bits (1201), Expect = e-129, Method: Compositional matrix adjust.
Identities = 244/647 (37%), Positives = 373/647 (57%), Gaps = 48/647 (7%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV----VSWTVMLGGFIRDSRIDDA 56
+PE N+ W M+RGY +L+ +M + V ++ + GF RD ++
Sbjct: 78 IPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDIALEYG 137
Query: 57 RRLFDMMP----EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
R+L + + +V T +V Y G++D R +FD PK +VI+W +IS Y
Sbjct: 138 RQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISAYNKV 197
Query: 113 NRIDVARKLFEVMPEK---------------------------------------NEVSW 133
+ + +R+LF VM +K N V
Sbjct: 198 GKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLE 257
Query: 134 TAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDA 193
AM+ Y CG + A +F++M + +++ +++ G GE+ AR FD+M EKD
Sbjct: 258 NAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYV 317
Query: 194 TWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQL 253
+W+ MI Y R E ++LF MQ V+ + +++SVL+ CA L +L+ G + +
Sbjct: 318 SWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYI 377
Query: 254 VRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSL 313
R + D++V + LI MY KCG++ K + IF + +D W ++I G A G GEK+L
Sbjct: 378 DRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGEKAL 437
Query: 314 KVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDL 373
+F M + ++PD++T +GVLSAC++TG V +GR+ F M S++ +EP HY C+VDL
Sbjct: 438 DMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDL 497
Query: 374 LGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPY 433
L RAG++++A ++IE MP + ++I+WG+LL CR + + D+AE+ K++L+LEP N Y
Sbjct: 498 LARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQILELEPDNGAVY 557
Query: 434 ILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMI 493
+LL NIYA+ R++D+ ELR+ M + + K PGCS IE+ +VH F D SHP+ I
Sbjct: 558 VLLCNIYAACKRWNDLRELRQMMMDKGIKKTPGCSLIEMNGRVHEFVAGD-RSHPQTKNI 616
Query: 494 MRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRV 553
L+K+ L+ AGY PD S V D+ EE+K +S+ HSEKLA+A+GL+ P GV IR+
Sbjct: 617 DAKLDKMTQDLKLAGYSPDISEVFLDIAEEDKENSVFRHSEKLAIAFGLINSPPGVTIRI 676
Query: 554 MKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
KNLR+C DCH+ KL+SKV RE+I+RD RFHHFK GLCSC+DYW
Sbjct: 677 TKNLRMCMDCHNMAKLVSKVYNREVIVRDRTRFHHFKHGLCSCKDYW 723
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/301 (28%), Positives = 153/301 (50%), Gaps = 12/301 (3%)
Query: 175 GEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGV---RVNFPSLI 231
G+ Q AR +FD++ E + W+ MI+ Y R + + L+ M + GV R FP L
Sbjct: 66 GDFQYARRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLF 125
Query: 232 SVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASK 291
+ +L++GRQ+H +++ +V+V + L+ MY+ CG+L + +FD
Sbjct: 126 KGFT---RDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKA 182
Query: 292 DIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIF 351
D++ WN IIS Y + G E+S ++F M V+P VTLV VLSACS ++ G+++
Sbjct: 183 DVITWNMIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVH 242
Query: 352 ESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMK 411
+K+ VE M+D+ G+++ A+ + +M D I W +++ +
Sbjct: 243 SYVKNCK-VESNLVLENAMIDMYADCGEMDSALGIFRSMN-NRDIISWTTIVSGFTNLGE 300
Query: 412 LDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIE 471
+D+A K+ + K+ + + + Y RF + EL +NM+ NV KP + +
Sbjct: 301 IDVARNYFDKMPE---KDYVSWTAMIDGYIRSNRFKEALELFRNMQATNV-KPDEFTMVS 356
Query: 472 V 472
V
Sbjct: 357 V 357
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 92/374 (24%), Positives = 172/374 (45%), Gaps = 46/374 (12%)
Query: 73 NMVLGYC---QDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEK- 128
N V+ +C + G R +FDE+P+ N+ W TMI GY + + L+ M +
Sbjct: 54 NRVMTFCCTHEYGDFQYARRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRG 113
Query: 129 ---NEVSWTAMLMGYT-----QCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKA 180
+ ++ + G+T + GR Q + K +V +++ G++ A
Sbjct: 114 VKPDRYTFPFLFKGFTRDIALEYGR-QLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTA 172
Query: 181 RVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASL 240
R VFD + D TW+ +I Y + G E LF +M+ + V +L+ VLS C+ L
Sbjct: 173 RGVFDVCPKADVITWNMIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKL 232
Query: 241 ASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSII 300
L G++VH+ + C+ + ++ + + +I MY CGE+ IF + ++DI+ W +I+
Sbjct: 233 KDLRTGKKVHSYVKNCKVESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIV 292
Query: 301 SGYAQYG-----------LGEK--------------------SLKVFHEMFSSGVMPDDV 329
SG+ G + EK +L++F M ++ V PD+
Sbjct: 293 SGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEF 352
Query: 330 TLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEA 389
T+V VL+AC++ G ++ G E + + ++ ++D+ + G V+ A +
Sbjct: 353 TMVSVLTACAHLGALELG-EWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFRE 411
Query: 390 MPFEPDAIIWGSLL 403
M + D W +++
Sbjct: 412 MS-QRDKFTWTAMI 424
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 96/205 (46%), Gaps = 10/205 (4%)
Query: 230 LISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYI--KCGELVKGKLIFDN 287
LIS+L C S+ D +QVH Q ++ + + + + ++T + G+ + +FD
Sbjct: 21 LISLLETCESM---DQLQQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQYARRLFDE 77
Query: 288 FASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEG 347
++ +WN++I GY++ + + ++ EM GV PD T + + ++ G
Sbjct: 78 IPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDIALEYG 137
Query: 348 REIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACR 407
R++ + K+ ++ + +V + GQ++ A + + P + D I W ++ A
Sbjct: 138 RQLHGHV-LKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCP-KADVITWNMIISA-- 193
Query: 408 THMKLDLAEVAAKKLLQLEPKNAGP 432
+ K+ E + + L +E K P
Sbjct: 194 -YNKVGKFEESRRLFLVMEDKQVLP 217
>gi|224125684|ref|XP_002319650.1| predicted protein [Populus trichocarpa]
gi|222858026|gb|EEE95573.1| predicted protein [Populus trichocarpa]
Length = 705
Score = 467 bits (1201), Expect = e-129, Method: Compositional matrix adjust.
Identities = 236/554 (42%), Positives = 349/554 (62%), Gaps = 20/554 (3%)
Query: 56 ARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRI 115
AR LFD M E+DVV+ + M+ Y +F +++++SWT MI+GY+ N +
Sbjct: 163 ARLLFDKMSERDVVSWSTMIRAYIT---------LFYGFSQRSIVSWTAMIAGYIRCNDL 213
Query: 116 DVARKLFEVMPEKN----EVSWTAMLM-----GYTQCGRIQDAWELFKAMPMKSVVASNS 166
+ +LF M E+N +++ ++++ G Q G+ A+ L M S+ + +
Sbjct: 214 EEGERLFVRMIEENVFPNDITMLSLIISCGFVGAVQLGKRLHAYILRNGFGM-SLALATA 272
Query: 167 MILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVN 226
++ G+ GE++ AR +FD M+ KD TW+ MI Y + LF M+ GVR N
Sbjct: 273 LVDMYGKCGEIRSARAIFDSMKNKDVMTWTAMISAYAQANCIDYAFQLFVQMRDNGVRPN 332
Query: 227 FPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFD 286
+++S+LS+CA +LD G+ HA + + +VDV + + LI MY KCG++ + +F
Sbjct: 333 ELTMVSLLSLCAVNGALDMGKWFHAYIDKQGVEVDVILKTALIDMYAKCGDISGAQRLFS 392
Query: 287 NFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKE 346
+DI WN +++GY +G GEK+LK+F EM + GV P+D+T +G L ACS+ G V E
Sbjct: 393 EAIDRDICTWNVMMAGYGMHGYGEKALKLFTEMETLGVKPNDITFIGALHACSHAGLVVE 452
Query: 347 GREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGAC 406
G+ +FE M + + PK EHY CMVDLLGRAG +++A K+IE+MP P+ IWG++L AC
Sbjct: 453 GKGLFEKMIHDFGLVPKVEHYGCMVDLLGRAGLLDEAYKMIESMPVTPNIAIWGAMLAAC 512
Query: 407 RTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPG 466
+ H ++ E+AA++LL LEP+N G +L+SNIYA+ R++DVA +RK ++ + K PG
Sbjct: 513 KIHKNSNMGELAARELLALEPQNCGYKVLMSNIYAAANRWNDVAGMRKAVKDTGIKKEPG 572
Query: 467 CSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKV 526
S IEV VH F D +HP I ML ++ L+EAGY PD+S VLH++DEEEK
Sbjct: 573 MSSIEVNGLVHDFKMGD-TAHPLIEKISEMLAEMSKKLKEAGYLPDTSVVLHNIDEEEKE 631
Query: 527 HSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRF 586
+L YHSEKLA+A+GL+ G PIRV+KNLR+C DCH+ KL+SK+ R II+RD NRF
Sbjct: 632 TALNYHSEKLAMAFGLISTAPGTPIRVVKNLRICDDCHTVTKLLSKIYKRVIIVRDRNRF 691
Query: 587 HHFKDGLCSCRDYW 600
HHF++G CSC YW
Sbjct: 692 HHFREGSCSCGGYW 705
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 144/294 (48%), Gaps = 27/294 (9%)
Query: 161 VVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYER--KGYELEVIDLFTLM 218
V N+++ + G + AR++FD+M E+D +WS MI+ Y G+ I +T M
Sbjct: 144 VFVVNALMQMYSECGSLVSARLLFDKMSERDVVSWSTMIRAYITLFYGFSQRSIVSWTAM 203
Query: 219 QKEGVRVN-----------------FPSLISVLSV---CASLASLDHGRQVHAQLVRCQF 258
+R N FP+ I++LS+ C + ++ G+++HA ++R F
Sbjct: 204 IAGYIRCNDLEEGERLFVRMIEENVFPNDITMLSLIISCGFVGAVQLGKRLHAYILRNGF 263
Query: 259 DVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHE 318
+ + +A+ L+ MY KCGE+ + IFD+ +KD++ W ++IS YAQ + + ++F +
Sbjct: 264 GMSLALATALVDMYGKCGEIRSARAIFDSMKNKDVMTWTAMISAYAQANCIDYAFQLFVQ 323
Query: 319 MFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAG 378
M +GV P+++T+V +LS C+ G + G+ F + K VE ++D+ + G
Sbjct: 324 MRDNGVRPNELTMVSLLSLCAVNGALDMGK-WFHAYIDKQGVEVDVILKTALIDMYAKCG 382
Query: 379 QVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGP 432
+ A +L + D W ++ H E A K ++E P
Sbjct: 383 DISGAQRLFSE-AIDRDICTWNVMMAGYGMH---GYGEKALKLFTEMETLGVKP 432
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 138/303 (45%), Gaps = 58/303 (19%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
M ER+VVSW+ M+R Y+ TLF+ ++++VSWT M+ G+IR + +++ RLF
Sbjct: 170 MSERDVVSWSTMIRAYI---------TLFYGFSQRSIVSWTAMIAGYIRCNDLEEGERLF 220
Query: 61 DMMPEKDVVAQ---------------------------------------TNMVLGYCQD 81
M E++V T +V Y +
Sbjct: 221 VRMIEENVFPNDITMLSLIISCGFVGAVQLGKRLHAYILRNGFGMSLALATALVDMYGKC 280
Query: 82 GRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEK----NEVSWTAML 137
G + R IFD M K+V++WT MIS Y N ID A +LF M + NE++ ++L
Sbjct: 281 GEIRSARAIFDSMKNKDVMTWTAMISAYAQANCIDYAFQLFVQMRDNGVRPNELTMVSLL 340
Query: 138 MGYTQCGRIQDAWELFKAMPMKS-----VVASNSMILGLGQNGEVQKARVVFDQMREKDD 192
G + D + F A K V+ ++I + G++ A+ +F + ++D
Sbjct: 341 SLCAVNGAL-DMGKWFHAYIDKQGVEVDVILKTALIDMYAKCGDISGAQRLFSEAIDRDI 399
Query: 193 ATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQ 252
TW+ M+ Y GY + + LFT M+ GV+ N + I L C+ + G+ + +
Sbjct: 400 CTWNVMMAGYGMHGYGEKALKLFTEMETLGVKPNDITFIGALHACSHAGLVVEGKGLFEK 459
Query: 253 LVR 255
++
Sbjct: 460 MIH 462
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 110/217 (50%), Gaps = 26/217 (11%)
Query: 212 IDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITM 271
++ +T M+K + V+ + SVL C+ ++ G+++H V+ DV+V + L+ M
Sbjct: 94 LNTYTYMRKLDIEVDSFIIPSVLKACSQISVARMGKEIHGFSVKNGLVSDVFVVNALMQM 153
Query: 272 YIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQ--YGLGEKSL---------------- 313
Y +CG LV +L+FD + +D+V W+++I Y YG ++S+
Sbjct: 154 YSECGSLVSARLLFDKMSERDVVSWSTMIRAYITLFYGFSQRSIVSWTAMIAGYIRCNDL 213
Query: 314 ----KVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFES-MKSKYLVEPKTEHYA 368
++F M V P+D+T++ ++ +C + G V+ G+ + +++ + +
Sbjct: 214 EEGERLFVRMIEENVFPNDITMLSLIISCGFVGAVQLGKRLHAYILRNGFGMSLALA--T 271
Query: 369 CMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
+VD+ G+ G++ A + ++M D + W +++ A
Sbjct: 272 ALVDMYGKCGEIRSARAIFDSMK-NKDVMTWTAMISA 307
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 97/217 (44%), Gaps = 18/217 (8%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRID---DAR 57
M ++V++WTAM+ Y + I A LF QM + V + + + ++ D
Sbjct: 293 MKNKDVMTWTAMISAYAQANCIDYAFQLFVQMRDNGVRPNELTMVSLLSLCAVNGALDMG 352
Query: 58 RLFDMMPEK-----DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+ F +K DV+ +T ++ Y + G + + +F E +++ +W M++GY +
Sbjct: 353 KWFHAYIDKQGVEVDVILKTALIDMYAKCGDISGAQRLFSEAIDRDICTWNVMMAGYGMH 412
Query: 113 NRIDVARKLFEVMP----EKNEVSWTAMLMGYTQCGRIQDAWELFKAMP-----MKSVVA 163
+ A KLF M + N++++ L + G + + LF+ M + V
Sbjct: 413 GYGEKALKLFTEMETLGVKPNDITFIGALHACSHAGLVVEGKGLFEKMIHDFGLVPKVEH 472
Query: 164 SNSMILGLGQNGEVQKARVVFDQMREKDD-ATWSGMI 199
M+ LG+ G + +A + + M + A W M+
Sbjct: 473 YGCMVDLLGRAGLLDEAYKMIESMPVTPNIAIWGAML 509
>gi|225436683|ref|XP_002262885.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 866
Score = 467 bits (1201), Expect = e-129, Method: Compositional matrix adjust.
Identities = 248/614 (40%), Positives = 365/614 (59%), Gaps = 15/614 (2%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIR----DSRIDDA 56
M RN VSW +M+ G+V G+ EA LF++M + V + I+ + A
Sbjct: 254 MENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKLTQTIFATVIKLCANIKEMSFA 313
Query: 57 RRLFDMMPEK----DVVAQTNMVLGYCQDGRVDEGREIFDEMPK-KNVISWTTMISGYVN 111
++L + + D+ +T +++ Y + +D+ ++F M +NV+SWT +ISGYV
Sbjct: 314 KQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQ 373
Query: 112 NNRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSM 167
N R D A LF M + N +++ +L Q + K S ++
Sbjct: 374 NGRTDRAMNLFCQMRREGVRPNHFTYSTILTANAAVSPSQIHALVVKTNYENSPSVGTAL 433
Query: 168 ILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNF 227
+ G+ +A +F+ + EKD WS M+ Y + G + +F + KEGV N
Sbjct: 434 SDSYSKIGDANEAAKIFELIDEKDIVAWSAMLSGYAQMGDIEGAVKIFLQLAKEGVEPNE 493
Query: 228 PSLISVLSVCAS-LASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFD 286
+ SVL+ CA+ AS++ G+Q H+ ++ F + V+S L+TMY K G + +F
Sbjct: 494 FTFSSVLNACAAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFK 553
Query: 287 NFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKE 346
+D+V WNS+ISGYAQ+G G+KSLK+F EM S + D +T +GV+SAC++ G V E
Sbjct: 554 RQVDRDLVSWNSMISGYAQHGCGKKSLKIFEEMRSKNLELDGITFIGVISACTHAGLVNE 613
Query: 347 GREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGAC 406
G+ F+ M Y + P EHY+CMVDL RAG +E AM LI MPF A IW +LL AC
Sbjct: 614 GQRYFDLMVKDYHIVPTMEHYSCMVDLYSRAGMLEKAMDLINKMPFPAGATIWRTLLAAC 673
Query: 407 RTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPG 466
R H+ + L E+AA+KL+ L+P+++ Y+LLSNIYA+ G + + A++RK M + V K G
Sbjct: 674 RVHLNVQLGELAAEKLISLQPQDSAAYVLLSNIYATAGNWQERAKVRKLMDMKKVKKEAG 733
Query: 467 CSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKV 526
SWIEV+ K F D +SHP+ I LE++ L++AGY PD+ +VLHDV+EE K
Sbjct: 734 YSWIEVKNKTFSFMAGD-LSHPQSDRIYLKLEELSIRLKDAGYYPDTKYVLHDVEEEHKE 792
Query: 527 HSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRF 586
L HSE+LA+A+GL+ P G PI+++KNLRVCGDCH+ IKLISK+ GR+I++RD+NRF
Sbjct: 793 VILSQHSERLAIAFGLIATPPGTPIQIVKNLRVCGDCHTVIKLISKIEGRDIVVRDSNRF 852
Query: 587 HHFKDGLCSCRDYW 600
HHFK G CSC DYW
Sbjct: 853 HHFKGGSCSCGDYW 866
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 106/377 (28%), Positives = 187/377 (49%), Gaps = 20/377 (5%)
Query: 66 KDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVM 125
+DV T++V Y + V++G +FDEM KNV+SWT++++GY N + A KLF M
Sbjct: 125 EDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAGYRQNGLNEQALKLFSQM 184
Query: 126 P----EKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKS-----VVASNSMILGLGQNGE 176
+ N ++ A+L G G ++ ++ M +KS + NSM+ ++
Sbjct: 185 QLEGIKPNPFTFAAVLGGLAADGAVEKGVQV-HTMVIKSGLDSTIFVGNSMVNMYSKSLM 243
Query: 177 VQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSV 236
V A+ VFD M ++ +W+ MI + G +LE +LF M+ EGV++ +V+ +
Sbjct: 244 VSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKLTQTIFATVIKL 303
Query: 237 CASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKG-KLIFDNFASKDIVM 295
CA++ + +Q+H Q+++ D D+ + + L+ Y KC E+ KL +++V
Sbjct: 304 CANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLFCMMHGVQNVVS 363
Query: 296 WNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMK 355
W +IISGY Q G ++++ +F +M GV P+ T +L+A V + +K
Sbjct: 364 WTAIISGYVQNGRTDRAMNLFCQMRREGVRPNHFTYSTILTA---NAAVSPSQIHALVVK 420
Query: 356 SKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLA 415
+ Y P + D + G +A K+ E + E D + W ++L + ++
Sbjct: 421 TNYENSPSVG--TALSDSYSKIGDANEAAKIFELID-EKDIVAWSAMLSG---YAQMGDI 474
Query: 416 EVAAKKLLQLEPKNAGP 432
E A K LQL + P
Sbjct: 475 EGAVKIFLQLAKEGVEP 491
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 107/449 (23%), Positives = 208/449 (46%), Gaps = 86/449 (19%)
Query: 41 TVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMP----K 96
T ++ +++ ++D R+FD M K+VV+ T+++ GY Q+G ++ ++F +M K
Sbjct: 131 TSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAGYRQNGLNEQALKLFSQMQLEGIK 190
Query: 97 KNVISWTTMISG--------------------------YVNNNRIDV---------ARKL 121
N ++ ++ G +V N+ +++ A+ +
Sbjct: 191 PNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVSDAKAV 250
Query: 122 FEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSM---ILGLGQN-GEV 177
F+ M +N VSW +M+ G+ G +A+ELF M ++ V + ++ ++ L N E+
Sbjct: 251 FDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKLTQTIFATVIKLCANIKEM 310
Query: 178 QKAR----------------------VVFDQMREKDDA--------------TWSGMIKV 201
A+ V + + E DDA +W+ +I
Sbjct: 311 SFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLFCMMHGVQNVVSWTAIISG 370
Query: 202 YERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVD 261
Y + G ++LF M++EGVR N + ++L+ A+++ Q+HA +V+ ++
Sbjct: 371 YVQNGRTDRAMNLFCQMRREGVRPNHFTYSTILTANAAVSP----SQIHALVVKTNYENS 426
Query: 262 VYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFS 321
V + L Y K G+ + IF+ KDIV W++++SGYAQ G E ++K+F ++
Sbjct: 427 PSVGTALSDSYSKIGDANEAAKIFELIDEKDIVAWSAMLSGYAQMGDIEGAVKIFLQLAK 486
Query: 322 SGVMPDDVTLVGVLSACSY-TGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQV 380
GV P++ T VL+AC+ T V++G++ F S K + +V + + G +
Sbjct: 487 EGVEPNEFTFSSVLNACAAPTASVEQGKQ-FHSCSIKSGFSNALCVSSALVTMYAKRGNI 545
Query: 381 EDAMKLIEAMPFEPDAIIWGSLLGACRTH 409
E A ++ + + D + W S++ H
Sbjct: 546 ESANEVFKRQ-VDRDLVSWNSMISGYAQH 573
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 145/292 (49%), Gaps = 14/292 (4%)
Query: 180 ARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCAS 239
++ +FD+ ++ + + ++ + R E ++LF +++ G + SL VL VC
Sbjct: 45 SQQLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGC 104
Query: 240 LASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSI 299
L G+QVH Q ++C F DV V + L+ MY+K + G+ +FD K++V W S+
Sbjct: 105 LFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSL 164
Query: 300 ISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYL 359
++GY Q GL E++LK+F +M G+ P+ T VL + G V++G ++ +M K
Sbjct: 165 LAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQV-HTMVIKSG 223
Query: 360 VEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAA 419
++ MV++ ++ V DA + ++M +A+ W S++ T+ LDL
Sbjct: 224 LDSTIFVGNSMVNMYSKSLMVSDAKAVFDSME-NRNAVSWNSMIAGFVTN-GLDLEAFEL 281
Query: 420 KKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIE 471
++LE + +Q F V +L N+++ + K C I+
Sbjct: 282 FYRMRLE-----------GVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIK 322
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 77/339 (22%), Positives = 160/339 (47%), Gaps = 15/339 (4%)
Query: 88 REIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQ-CG-- 144
+++FDE P++ + ++ + N++ A LF + + + L + CG
Sbjct: 46 QQLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGCL 105
Query: 145 --RI---QDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMI 199
RI Q + K ++ V S++ + V+ VFD+MR K+ +W+ ++
Sbjct: 106 FDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLL 165
Query: 200 KVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFD 259
Y + G + + LF+ MQ EG++ N + +VL A+ +++ G QVH +++ D
Sbjct: 166 AGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLD 225
Query: 260 VDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEM 319
++V + ++ MY K + K +FD+ +++ V WNS+I+G+ GL ++ ++F+ M
Sbjct: 226 STIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRM 285
Query: 320 FSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESM---KSKYLVEPKTEHYACMVDLLGR 376
GV V+ C+ ++ +++ + S + + KT A MV +
Sbjct: 286 RLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKT---ALMV-AYSK 341
Query: 377 AGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLA 415
+++DA KL M + + W +++ + + D A
Sbjct: 342 CSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRA 380
>gi|225435852|ref|XP_002265253.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Vitis vinifera]
Length = 972
Score = 466 bits (1200), Expect = e-128, Method: Compositional matrix adjust.
Identities = 249/682 (36%), Positives = 376/682 (55%), Gaps = 89/682 (13%)
Query: 7 VSWTAMVRGYVEEGMITEAGTLFWQMP-----EKNVVSWTVMLGGFIRDSRIDDARRLFD 61
V+W A++ GY + G EA F +M + NVVSWT ++ G ++ +A +F
Sbjct: 292 VTWNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFR 351
Query: 62 MM------PEKDVVAQ-----TNMVL--------GYC---------------------QD 81
M P +A TN+ L GYC +
Sbjct: 352 KMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKC 411
Query: 82 GRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMP----EKNEVSWTAML 137
V+ R F + + +++SW M++GY + A +L M E + ++W ++
Sbjct: 412 RSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLV 471
Query: 138 MGYTQCGRIQDAWELFKAMPMKSVVASNSMILG-LGQNGEVQKARV-------------- 182
G+TQ G + A E F+ M + + + I G L G+V+ ++
Sbjct: 472 TGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIE 531
Query: 183 ------------------------VFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLM 218
VF ++ +D W+ +I + G + +DL M
Sbjct: 532 LSTGVGSALISMYSGCDSLEVACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREM 591
Query: 219 QKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGEL 278
V VN +++S L C+ LA+L G+++H ++RC D ++ + LI MY +CG +
Sbjct: 592 NLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSI 651
Query: 279 VKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSAC 338
K + IFD +D+V WN +IS Y +G G ++ +F + + G+ P+ +T +LSAC
Sbjct: 652 QKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSAC 711
Query: 339 SYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAII 398
S++G ++EG + F+ MK++Y ++P E YACMVDLL RAGQ + ++ IE MPFEP+A +
Sbjct: 712 SHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAV 771
Query: 399 WGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRK 458
WGSLLGACR H DLAE AA+ L +LEP+++G Y+L++NIY++ GR+ D A++R M++
Sbjct: 772 WGSLLGACRIHCNPDLAEYAARYLFELEPQSSGNYVLMANIYSAAGRWEDAAKIRCLMKE 831
Query: 459 RNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLH 518
R V KPPGCSWIEV++K+H F D SHP I +E + ++E GY PD++FVL
Sbjct: 832 RGVTKPPGCSWIEVKRKLHSFVVGD-TSHPLMEQISAKMESLYFDIKEIGYVPDTNFVLQ 890
Query: 519 DVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREI 578
DVDE+EK SL HSEK+A+A+GL+ G P+R++KNLRVCGDCHSA K ISKV R+I
Sbjct: 891 DVDEDEKEFSLCGHSEKIALAFGLISTTAGTPLRIIKNLRVCGDCHSATKFISKVEKRDI 950
Query: 579 ILRDANRFHHFKDGLCSCRDYW 600
I+RD RFHHF DG+CSC DYW
Sbjct: 951 IMRDNYRFHHFVDGVCSCGDYW 972
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 116/458 (25%), Positives = 211/458 (46%), Gaps = 63/458 (13%)
Query: 16 YVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMM------PEKDVV 69
Y + G + +A +F +M E+NV SWT ++ + ++ +LF +M P+ V
Sbjct: 134 YCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVF 193
Query: 70 AQTNMVLGYCQDGRVDEGREIFDEMP----KKNVISWTTMISGYVNNNRIDVARKLFEVM 125
+ ++ RV G++++D M + N +++ ++ R+D+AR+ FE +
Sbjct: 194 PKVFKACSELKNYRV--GKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEI 251
Query: 126 PEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSV----VASNSMILGLGQNGEVQKAR 181
K+ W M+ GYT G + A + M + V V N++I G Q+G+ ++A
Sbjct: 252 EFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIISGYAQSGQFEEAS 311
Query: 182 VVFDQMREKDD-----ATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSV 236
F +M D +W+ +I E+ GY+ E + +F M EGV+ N ++ S +S
Sbjct: 312 KYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSA 371
Query: 237 CASLASLDHGRQVHAQLVRCQ-FDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVM 295
C +L+ L HGR++H ++ + D D+ V + L+ Y KC + + F D+V
Sbjct: 372 CTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVS 431
Query: 296 WNSIISGYA-----------------------------------QYGLGEKSLKVFHEMF 320
WN++++GYA QYG G+ +L+ F M
Sbjct: 432 WNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRMH 491
Query: 321 SSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQV 380
S G+ P+ T+ G L+AC +K G+EI + + +E T + ++ + +
Sbjct: 492 SMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNH-IELSTGVGSALISMYSGCDSL 550
Query: 381 EDAMKLIEAMPFEPDAIIWGSLLGAC----RTHMKLDL 414
E A + + D ++W S++ AC R+ LDL
Sbjct: 551 EVACSVFSELSTR-DVVVWNSIISACAQSGRSVNALDL 587
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 128/280 (45%), Gaps = 35/280 (12%)
Query: 136 MLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATW 195
+L Y Q G ++D AR +FD+M E++ +W
Sbjct: 130 LLEVYCQTGCVED-------------------------------ARRMFDKMSERNVFSW 158
Query: 196 SGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVR 255
+ ++++Y G E I LF LM EGVR + V C+ L + G+ V+ ++
Sbjct: 159 TAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLS 218
Query: 256 CQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKV 315
F+ + V ++ M+IKCG + + F+ KD+ MWN ++SGY G +K+LK
Sbjct: 219 IGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKC 278
Query: 316 FHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLG 375
+M SGV PD VT ++S + +G+ +E + F M +P + ++
Sbjct: 279 ISDMKLSGVKPDQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSE 338
Query: 376 RAGQVEDAMKLIEAMPFE---PDAIIWGSLLGACRTHMKL 412
+ G +A+ + M E P++I S + AC T++ L
Sbjct: 339 QNGYDFEALSVFRKMVLEGVKPNSITIASAVSAC-TNLSL 377
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 118/244 (48%), Gaps = 13/244 (5%)
Query: 232 SVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASK 291
S+L C L +L G QVHAQLV DV ++ S L+ +Y + G + + +FD + +
Sbjct: 94 SILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSER 153
Query: 292 DIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIF 351
++ W +I+ Y G E+++K+F+ M + GV PD V ACS + G++++
Sbjct: 154 NVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVY 213
Query: 352 ESMKSKYLVEPKTEHYAC----MVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA-- 405
+ Y++ E +C ++D+ + G+++ A + E + F+ D +W ++
Sbjct: 214 D-----YMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFK-DVFMWNIMVSGYT 267
Query: 406 CRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPP 465
+ K L ++ KL ++P ++S YA G+F + ++ M KP
Sbjct: 268 SKGEFKKALKCISDMKLSGVKPDQVTWNAIISG-YAQSGQFEEASKYFLEMGGLKDFKPN 326
Query: 466 GCSW 469
SW
Sbjct: 327 VVSW 330
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 141/312 (45%), Gaps = 52/312 (16%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMP----EKNVVSWTVMLGGFIRDSRIDDA 56
+ + ++VSW AM+ GY G EA L +M E ++++W ++ GF + A
Sbjct: 424 IKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAA 483
Query: 57 RRLFDMMPEKDVVAQTNMV---LGYCQDGR-VDEGREIFDEMPKKNVISWT----TMISG 108
F M + T + L C R + G+EI + + ++ T +IS
Sbjct: 484 LEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGVGSALISM 543
Query: 109 YVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFK-------------- 154
Y + ++VA +F + ++ V W +++ Q GR +A +L +
Sbjct: 544 YSGCDSLEVACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTM 603
Query: 155 --AMPMKSVVAS-----------------------NSMILGLGQNGEVQKARVVFDQMRE 189
A+P S +A+ NS+I G+ G +QK+R +FD M +
Sbjct: 604 VSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQ 663
Query: 190 KDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQV 249
+D +W+ MI VY G+ ++ ++LF + G++ N + ++LS C+ ++ G +
Sbjct: 664 RDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSACSHSGLIEEGWK- 722
Query: 250 HAQLVRCQFDVD 261
+ ++++ ++ +D
Sbjct: 723 YFKMMKTEYAMD 734
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 80/176 (45%), Gaps = 15/176 (8%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMP----EKNVVSWTVMLGGFIRDSRIDDA 56
MP+R++VSW M+ Y G +A LF Q + N +++T +L I++
Sbjct: 661 MPQRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSACSHSGLIEEG 720
Query: 57 RRLFDMMP-----EKDVVAQTNMVLGYCQDGRVDEGREIFDEMP-KKNVISWTTMISGYV 110
+ F MM + V MV + G+ +E E ++MP + N W +++
Sbjct: 721 WKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGACR 780
Query: 111 NNNRIDV----ARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVV 162
+ D+ AR LFE+ P+ + ++ M Y+ GR +DA ++ M + V
Sbjct: 781 IHCNPDLAEYAARYLFELEPQSSG-NYVLMANIYSAAGRWEDAAKIRCLMKERGVT 835
>gi|224124638|ref|XP_002330073.1| predicted protein [Populus trichocarpa]
gi|222871498|gb|EEF08629.1| predicted protein [Populus trichocarpa]
Length = 793
Score = 466 bits (1199), Expect = e-128, Method: Compositional matrix adjust.
Identities = 244/637 (38%), Positives = 370/637 (58%), Gaps = 40/637 (6%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDM 62
+ +V ++ Y G +++A +F ++VSW ML G++ +++A+ ++D
Sbjct: 158 DSDVYIQNTLINMYAVCGNLSDARKVFDGSSVLDMVSWNSMLAGYVLVGNVEEAKDVYDR 217
Query: 63 MPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLF 122
MPE++V+A +M++ + + G V+E ++F+EM +K+++SW+ +IS Y N + A LF
Sbjct: 218 MPERNVIASNSMIVLFGKKGNVEEACKLFNEMKQKDLVSWSALISCYEQNEMYEEALILF 277
Query: 123 EVMPEK----NEVS-----------------------------------WTAMLMGYTQC 143
+ M +EV A++ Y+ C
Sbjct: 278 KEMNANGIMVDEVVVLSVLSACSRLLVVITGKLVHGLVVKVGIETYVNLQNALIHMYSSC 337
Query: 144 GRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYE 203
+ A +LF ++ NSMI G + GE++KAR +FD M +KD+ +WS MI Y
Sbjct: 338 EEVVTAQKLFSESCCLDQISWNSMISGYVKCGEIEKARALFDSMPDKDNVSWSAMISGYA 397
Query: 204 RKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVY 263
++ E + LF MQ EG + + L+SV+S C LA+LD G+ +HA + + +++
Sbjct: 398 QQDRFTETLVLFQEMQIEGTKPDETILVSVISACTHLAALDQGKWIHAYIRKNGLKINII 457
Query: 264 VASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSG 323
+ + LI MY+K G + +F K + WN++I G A GL +KSLK F EM G
Sbjct: 458 LGTTLINMYMKLGCVEDALEVFKGLEEKGVSTWNALILGLAMNGLVDKSLKTFSEMKEHG 517
Query: 324 VMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDA 383
V P+++T V VL AC + G V EG F SM ++ + P +HY CMVDLLGRAG +++A
Sbjct: 518 VTPNEITFVAVLGACRHMGLVDEGHRHFNSMIQEHKIGPNIKHYGCMVDLLGRAGMLKEA 577
Query: 384 MKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQ 443
+LIE+MP PD WG+LLGAC+ + + E +KL++L P + G +LLSNIYAS+
Sbjct: 578 EELIESMPMAPDVSTWGALLGACKKYGDNETGERIGRKLVELHPDHDGFNVLLSNIYASK 637
Query: 444 GRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGL 503
G + DV E+R MR+ V+K PGCS IE +VH F D +HP++ I ML+++
Sbjct: 638 GNWVDVLEVRGMMRQHGVVKTPGCSMIEAHGRVHEFLAGD-KTHPQNEHIEHMLDEMAKK 696
Query: 504 LREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDC 563
L+ GY PD+ V D+DEEEK +L HSEKLA+A+GL+ + PIR++KNLR+C DC
Sbjct: 697 LKLEGYAPDTREVSLDIDEEEKETTLFRHSEKLAIAFGLIAIDPPTPIRIVKNLRICNDC 756
Query: 564 HSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
H+A KLISK REI++RD +RFHHFK G CSC DYW
Sbjct: 757 HTAAKLISKAFNREIVVRDRHRFHHFKQGSCSCMDYW 793
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/395 (22%), Positives = 170/395 (43%), Gaps = 80/395 (20%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MPERNV++ +M+ + ++G + EA LF +M +K++VSW+ ++ + ++ ++A LF
Sbjct: 218 MPERNVIASNSMIVLFGKKGNVEEACKLFNEMKQKDLVSWSALISCYEQNEMYEEALILF 277
Query: 61 DMMPEKDVVAQTNMVLG---------------------------------------YCQD 81
M ++ +VL Y
Sbjct: 278 KEMNANGIMVDEVVVLSVLSACSRLLVVITGKLVHGLVVKVGIETYVNLQNALIHMYSSC 337
Query: 82 GRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYT 141
V +++F E + ISW +MISGYV I+ AR LF+ MP+K+ VSW+AM+ GY
Sbjct: 338 EEVVTAQKLFSESCCLDQISWNSMISGYVKCGEIEKARALFDSMPDKDNVSWSAMISGYA 397
Query: 142 QCGRIQDAWELFKAMPMK----------SVVASNSMILGLGQN----------------- 174
Q R + LF+ M ++ SV+++ + + L Q
Sbjct: 398 QQDRFTETLVLFQEMQIEGTKPDETILVSVISACTHLAALDQGKWIHAYIRKNGLKINII 457
Query: 175 ------------GEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEG 222
G V+ A VF + EK +TW+ +I G + + F+ M++ G
Sbjct: 458 LGTTLINMYMKLGCVEDALEVFKGLEEKGVSTWNALILGLAMNGLVDKSLKTFSEMKEHG 517
Query: 223 VRVNFPSLISVLSVCASLASLDHG-RQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKG 281
V N + ++VL C + +D G R ++ + + ++ ++ + + G L +
Sbjct: 518 VTPNEITFVAVLGACRHMGLVDEGHRHFNSMIQEHKIGPNIKHYGCMVDLLGRAGMLKEA 577
Query: 282 KLIFDNFA-SKDIVMWNSIISGYAQYGLGEKSLKV 315
+ + ++ + D+ W +++ +YG E ++
Sbjct: 578 EELIESMPMAPDVSTWGALLGACKKYGDNETGERI 612
>gi|449491161|ref|XP_004158817.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g15930-like [Cucumis
sativus]
Length = 744
Score = 466 bits (1199), Expect = e-128, Method: Compositional matrix adjust.
Identities = 244/647 (37%), Positives = 373/647 (57%), Gaps = 48/647 (7%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV----VSWTVMLGGFIRDSRIDDA 56
+PE N+ W M+RGY +L+ +M + V ++ + GF RD ++
Sbjct: 99 IPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDIALEYG 158
Query: 57 RRLFDMMP----EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
R+L + + +V T +V Y G++D R +FD PK +VI+W +IS Y
Sbjct: 159 RQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISAYNKV 218
Query: 113 NRIDVARKLFEVMPEK---------------------------------------NEVSW 133
+ + +R+LF VM +K N V
Sbjct: 219 GKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLE 278
Query: 134 TAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDA 193
AM+ Y CG + A +F++M + +++ +++ G GE+ AR FD+M EKD
Sbjct: 279 NAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYV 338
Query: 194 TWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQL 253
+W+ MI Y R E ++LF MQ V+ + +++SVL+ CA L +L+ G + +
Sbjct: 339 SWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYI 398
Query: 254 VRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSL 313
R + D++V + LI MY KCG++ K + IF + +D W ++I G A G GEK+L
Sbjct: 399 DRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGEKAL 458
Query: 314 KVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDL 373
+F M + ++PD++T +GVLSAC++TG V +GR+ F M S++ +EP HY C+VDL
Sbjct: 459 DMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDL 518
Query: 374 LGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPY 433
L RAG++++A ++IE MP + ++I+WG+LL CR + + D+AE+ K++L+LEP N Y
Sbjct: 519 LARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQILELEPDNGAVY 578
Query: 434 ILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMI 493
+LL NIYA+ R++D+ ELR+ M + + K PGCS IE+ +VH F D SHP+ I
Sbjct: 579 VLLCNIYAACKRWNDLRELRQMMMDKGIKKXPGCSLIEMNGRVHEFVAGD-RSHPQTKNI 637
Query: 494 MRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRV 553
L+K+ L+ AGY PD S V D+ EE+K +S+ HSEKLA+A+GL+ P GV IR+
Sbjct: 638 DAKLDKMTQDLKLAGYSPDISEVFLDIAEEDKENSVFRHSEKLAIAFGLINSPPGVTIRI 697
Query: 554 MKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
KNLR+C DCH+ KL+SKV RE+I+RD RFHHFK GLCSC+DYW
Sbjct: 698 TKNLRMCMDCHNMAKLVSKVYNREVIVRDRTRFHHFKHGLCSCKDYW 744
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/301 (28%), Positives = 153/301 (50%), Gaps = 12/301 (3%)
Query: 175 GEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGV---RVNFPSLI 231
G+ Q AR +FD++ E + W+ MI+ Y R + + L+ M + GV R FP L
Sbjct: 87 GDFQYARRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLF 146
Query: 232 SVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASK 291
+ +L++GRQ+H +++ +V+V + L+ MY+ CG+L + +FD
Sbjct: 147 KGFT---RDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKA 203
Query: 292 DIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIF 351
D++ WN IIS Y + G E+S ++F M V+P VTLV VLSACS ++ G+++
Sbjct: 204 DVITWNMIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVH 263
Query: 352 ESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMK 411
+K+ VE M+D+ G+++ A+ + +M D I W +++ +
Sbjct: 264 SYVKN-CKVESNLVLENAMIDMYADCGEMDSALGIFRSMN-NRDIISWTTIVSGFTNLGE 321
Query: 412 LDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIE 471
+D+A K+ + K+ + + + Y RF + EL +NM+ NV KP + +
Sbjct: 322 IDVARNYFDKMPE---KDYVSWTAMIDGYIRSNRFKEALELFRNMQATNV-KPDEFTMVS 377
Query: 472 V 472
V
Sbjct: 378 V 378
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 92/374 (24%), Positives = 172/374 (45%), Gaps = 46/374 (12%)
Query: 73 NMVLGYC---QDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEK- 128
N V+ +C + G R +FDE+P+ N+ W TMI GY + + L+ M +
Sbjct: 75 NRVMTFCCTHEYGDFQYARRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRG 134
Query: 129 ---NEVSWTAMLMGYT-----QCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKA 180
+ ++ + G+T + GR Q + K +V +++ G++ A
Sbjct: 135 VKPDRYTFPFLFKGFTRDIALEYGR-QLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTA 193
Query: 181 RVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASL 240
R VFD + D TW+ +I Y + G E LF +M+ + V +L+ VLS C+ L
Sbjct: 194 RGVFDVCPKADVITWNMIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKL 253
Query: 241 ASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSII 300
L G++VH+ + C+ + ++ + + +I MY CGE+ IF + ++DI+ W +I+
Sbjct: 254 KDLRTGKKVHSYVKNCKVESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIV 313
Query: 301 SGYAQYG-----------LGEK--------------------SLKVFHEMFSSGVMPDDV 329
SG+ G + EK +L++F M ++ V PD+
Sbjct: 314 SGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEF 373
Query: 330 TLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEA 389
T+V VL+AC++ G ++ G E + + ++ ++D+ + G V+ A +
Sbjct: 374 TMVSVLTACAHLGALELG-EWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFRE 432
Query: 390 MPFEPDAIIWGSLL 403
M + D W +++
Sbjct: 433 MS-QRDKFTWTAMI 445
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 96/205 (46%), Gaps = 10/205 (4%)
Query: 230 LISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYI--KCGELVKGKLIFDN 287
LIS+L C S+ D +QVH Q ++ + + + + ++T + G+ + +FD
Sbjct: 42 LISLLETCESM---DQLQQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQYARRLFDE 98
Query: 288 FASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEG 347
++ +WN++I GY++ + + ++ EM GV PD T + + ++ G
Sbjct: 99 IPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDIALEYG 158
Query: 348 REIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACR 407
R++ + K+ ++ + +V + GQ++ A + + P + D I W ++ A
Sbjct: 159 RQLHGHV-LKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCP-KADVITWNMIISA-- 214
Query: 408 THMKLDLAEVAAKKLLQLEPKNAGP 432
+ K+ E + + L +E K P
Sbjct: 215 -YNKVGKFEESRRLFLVMEDKQVLP 238
>gi|302820798|ref|XP_002992065.1| hypothetical protein SELMODRAFT_134581 [Selaginella moellendorffii]
gi|300140187|gb|EFJ06914.1| hypothetical protein SELMODRAFT_134581 [Selaginella moellendorffii]
Length = 771
Score = 466 bits (1199), Expect = e-128, Method: Compositional matrix adjust.
Identities = 243/639 (38%), Positives = 375/639 (58%), Gaps = 43/639 (6%)
Query: 4 RNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMM 63
R+VVSW +V GY + EA LF +MP + V+ T +L G+ + + +A+ LFD +
Sbjct: 134 RDVVSWAILVAGYARHDRLEEASALFRRMPLWDTVTCTSVLQGYAHNGHLAEAQELFDRI 193
Query: 64 P---EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARK 120
++D A M+ Y ++ RVD +F ++ +N SW+ ++ Y N +D+A+K
Sbjct: 194 GGAGDRDATACNAMIAAYGKNARVDLAEGLFAQIKLRNAASWSLLLLTYAQNGHLDLAKK 253
Query: 121 LFEVMPEKNEVS-------------------------------WTAMLMGYTQCGRIQDA 149
F+ MP+++ ++ W A+L GY++ G + +
Sbjct: 254 SFDRMPQRDSIAFTAMTAVLSDQGELRGAREMLRYLSAVDVIAWNALLEGYSRTGDLDEV 313
Query: 150 WELFKAMPMKSV---VASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKG 206
LF AM ++V V + +++ G+ G V AR V D M + +W+ MI Y + G
Sbjct: 314 RRLFSAMEHRTVATTVVAGTLVNLYGKCGRVDDARRVLDAMPVRTSVSWTAMIAAYAQNG 373
Query: 207 YELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQ-FDVDVYVA 265
E I+LF M EG + +LISV+ CA L +L G+++HA++ F + +
Sbjct: 374 NAAEAINLFQCMDLEGAEPSDITLISVVDSCAVLGTLSLGKRIHARIRSSPLFSQSLMLL 433
Query: 266 SVLITMYIKCGELVKGKLIFDN--FASKDIVMWNSIISGYAQYGLGEKSLKVFHEM-FSS 322
+ +ITMY KCG L + +F++ ++ +V W ++I YAQ G+GE+++++F EM
Sbjct: 434 NAVITMYGKCGNLELAREVFESVPLRTRSVVTWTAMIRAYAQNGVGEEAIELFQEMVIDG 493
Query: 323 GVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVED 382
G P+ VT + VLSACS+ G++++ E F SM + V P +HY C+VDLLGRAG++ +
Sbjct: 494 GTEPNRVTFLSVLSACSHLGQLEQAWEHFCSMGPDFGVPPAGDHYCCLVDLLGRAGRLGE 553
Query: 383 AMKLI-EAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYA 441
A KL+ FE D + W + L AC+ + L+ ++ AAK++ +LEP+N +LLSN+YA
Sbjct: 554 AEKLLLRHKDFEADVVCWIAFLSACQMNGDLERSQRAAKRVSELEPENVAGRVLLSNVYA 613
Query: 442 SQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIG 501
++GR DVA +R M+ V K G SWIE+ +VH F D VSHP I LE++
Sbjct: 614 AKGRRADVARIRNEMKSSGVKKFAGRSWIEINNRVHEFMVSD-VSHPRKLEIYSELERLH 672
Query: 502 GLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCG 561
++EAGY PD+ VL DVDEE+K L YHSE+LA+A G++ P G +RV+KNLRVC
Sbjct: 673 REIKEAGYVPDTKMVLRDVDEEKKAQLLGYHSERLAMALGIISTPPGTTLRVVKNLRVCS 732
Query: 562 DCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
DCH+A K IS+++GR+II+RD +RFHHFKDG+CSC DYW
Sbjct: 733 DCHAATKFISQIVGRQIIVRDTSRFHHFKDGVCSCGDYW 771
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 102/406 (25%), Positives = 206/406 (50%), Gaps = 10/406 (2%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFD-MM 63
N SW+ +++ YV I +A LF MP + +W +M+ + R +R+DDAR LF M+
Sbjct: 72 NEYSWSCIIQAYVSSSRIHDARALFDSMPGFDAFTWNIMIAAYARINRLDDARELFHGMI 131
Query: 64 PEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFE 123
+DVV+ +V GY + R++E +F MP + ++ T+++ GY +N + A++LF+
Sbjct: 132 SGRDVVSWAILVAGYARHDRLEEASALFRRMPLWDTVTCTSVLQGYAHNGHLAEAQELFD 191
Query: 124 VM---PEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKA 180
+ +++ + AM+ Y + R+ A LF + +++ + + ++L QNG + A
Sbjct: 192 RIGGAGDRDATACNAMIAAYGKNARVDLAEGLFAQIKLRNAASWSLLLLTYAQNGHLDLA 251
Query: 181 RVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASL 240
+ FD+M ++D ++ M V +G ++ + V+ + ++L +
Sbjct: 252 KKSFDRMPQRDSIAFTAMTAVLSDQGELRGAREMLRYLSA----VDVIAWNALLEGYSRT 307
Query: 241 ASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSII 300
LD R++ + + V VA L+ +Y KCG + + + D + V W ++I
Sbjct: 308 GDLDEVRRLFSAMEHRTVATTV-VAGTLVNLYGKCGRVDDARRVLDAMPVRTSVSWTAMI 366
Query: 301 SGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLV 360
+ YAQ G +++ +F M G P D+TL+ V+ +C+ G + G+ I ++S L
Sbjct: 367 AAYAQNGNAAEAINLFQCMDLEGAEPSDITLISVVDSCAVLGTLSLGKRIHARIRSSPLF 426
Query: 361 EPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAII-WGSLLGA 405
++ + G+ G +E A ++ E++P +++ W +++ A
Sbjct: 427 SQSLMLLNAVITMYGKCGNLELAREVFESVPLRTRSVVTWTAMIRA 472
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 89/347 (25%), Positives = 168/347 (48%), Gaps = 20/347 (5%)
Query: 64 PEKDVVAQTNMVL---GYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARK 120
P D TN+++ G C D D R +F+ + N SW+ +I YV+++RI AR
Sbjct: 37 PHGDNRRLTNLLIDLFGKCGDP--DAARAVFNRVRLPNEYSWSCIIQAYVSSSRIHDARA 94
Query: 121 LFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAM-PMKSVVASNSMILGLGQNGEVQK 179
LF+ MP + +W M+ Y + R+ DA ELF M + VV+ ++ G ++ +++
Sbjct: 95 LFDSMPGFDAFTWNIMIAAYARINRLDDARELFHGMISGRDVVSWAILVAGYARHDRLEE 154
Query: 180 ARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCAS 239
A +F +M D T + +++ Y G+ E +LF + G R + + ++++
Sbjct: 155 ASALFRRMPLWDTVTCTSVLQGYAHNGHLAEAQELFDRIGGAGDR-DATACNAMIAAYGK 213
Query: 240 LASLDHGRQVHAQL-VRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNS 298
A +D + AQ+ +R + S+L+ Y + G L K FD +D + + +
Sbjct: 214 NARVDLAEGLFAQIKLR-----NAASWSLLLLTYAQNGHLDLAKKSFDRMPQRDSIAFTA 268
Query: 299 IISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKY 358
+ + + G L+ EM D + +L S TG + E R +F +M+ +
Sbjct: 269 MTAVLSDQG----ELRGAREMLRYLSAVDVIAWNALLEGYSRTGDLDEVRRLFSAMEHRT 324
Query: 359 LVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
+ T +V+L G+ G+V+DA ++++AMP ++ W +++ A
Sbjct: 325 VA--TTVVAGTLVNLYGKCGRVDDARRVLDAMPVRT-SVSWTAMIAA 368
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 53/264 (20%), Positives = 105/264 (39%), Gaps = 48/264 (18%)
Query: 234 LSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGE---------------- 277
+ CA L + +H ++ R + + ++LI ++ KCG+
Sbjct: 14 IRACAIGRKLHEAKILHDEIARSPHGDNRRLTNLLIDLFGKCGDPDAARAVFNRVRLPNE 73
Query: 278 ---------------LVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSS 322
+ + +FD+ D WN +I+ YA+ + + ++FH M S
Sbjct: 74 YSWSCIIQAYVSSSRIHDARALFDSMPGFDAFTWNIMIAAYARINRLDDARELFHGMISG 133
Query: 323 GVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRA--GQV 380
D V+ +++ + +++E +F M P + C L G A G +
Sbjct: 134 ---RDVVSWAILVAGYARHDRLEEASALFRRM-------PLWDTVTCTSVLQGYAHNGHL 183
Query: 381 EDAMKLIEAM--PFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSN 438
+A +L + + + DA +++ A + ++DLAE Q++ +NA + LL
Sbjct: 184 AEAQELFDRIGGAGDRDATACNAMIAAYGKNARVDLAE---GLFAQIKLRNAASWSLLLL 240
Query: 439 IYASQGRFHDVAELRKNMRKRNVI 462
YA G + M +R+ I
Sbjct: 241 TYAQNGHLDLAKKSFDRMPQRDSI 264
>gi|242032827|ref|XP_002463808.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
gi|241917662|gb|EER90806.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
Length = 803
Score = 466 bits (1199), Expect = e-128, Method: Compositional matrix adjust.
Identities = 260/710 (36%), Positives = 383/710 (53%), Gaps = 114/710 (16%)
Query: 4 RNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF-DM 62
RN +W +++ Y + G + +A +F QMPE++ VSWTVM+ G R R DA + F DM
Sbjct: 95 RNAFTWNSLLSMYAKSGRLADARVVFAQMPERDAVSWTVMVVGLNRAGRFWDAVKTFLDM 154
Query: 63 MPEKDVVAQ---TNMV---------------------LG--------------YCQDGRV 84
+ E +Q TN++ LG Y + G
Sbjct: 155 VGEGLAPSQFMLTNVLSSCAATEARGIGRKVHSFVIKLGLSSCVPVANSVLYMYGKCGDA 214
Query: 85 DEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCG 144
+ R +F+ M ++ SW M+S Y + R+D+A +FE M E++ VSW A++ GY Q G
Sbjct: 215 ETARAVFERMKVRSESSWNAMVSLYTHQGRMDLALSMFENMEERSIVSWNAIIAGYNQNG 274
Query: 145 RIQDAWELFKAM-------PMKSVVAS--------------------------------- 164
A + F M P + V S
Sbjct: 275 LDDMALKFFSRMLTASSMEPDEFTVTSVLSACANLRMLKMGKQMHSYILRTGMPYSSQIM 334
Query: 165 NSMILGLGQNGEVQKARVVFDQ---------------------------------MREKD 191
N++I ++G V+ AR + D+ M +D
Sbjct: 335 NALISTYAKSGSVETARRIMDKAVVADLNVISFTALLEGYVKLGDTKQAREVFDVMNNRD 394
Query: 192 DATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHA 251
W+ MI YE+ G E ++LF M + G N +L +VLS CASLA L +G+Q+H
Sbjct: 395 VIAWTAMIVGYEQNGQNDEAMELFRSMIRSGPEPNSHTLAAVLSACASLAYLGYGKQIHC 454
Query: 252 QLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFA-SKDIVMWNSIISGYAQYGLGE 310
+ +R + V V++ +IT+Y + G + + +FD K+ V W S+I AQ+GLGE
Sbjct: 455 RAIRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETVTWTSMIVALAQHGLGE 514
Query: 311 KSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACM 370
+++ +F EM GV PD VT +GV SAC++ G + +G+ +E M +++ + P+ HYACM
Sbjct: 515 QAIVLFEEMLRVGVKPDRVTYIGVFSACTHAGFIDKGKRYYEQMLNEHGIVPEMSHYACM 574
Query: 371 VDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNA 430
VDLL RAG + +A + I+ MP PD ++WGSLL ACR DLAE+AA+KLL ++P N+
Sbjct: 575 VDLLARAGLLTEAHEFIQRMPVAPDTVVWGSLLAACRVRKNADLAELAAEKLLSIDPDNS 634
Query: 431 GPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEH 490
G Y L+N+Y++ GR++D A + K + + V K G SW V+ KVH+F G D V HP+
Sbjct: 635 GAYSALANVYSACGRWNDAARIWKLRKDKAVKKETGFSWTHVQSKVHVF-GADDVLHPQR 693
Query: 491 PMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVP 550
I + ++ +++AG+ PD + VLHDVD+E K L HSEKLA+A+GL+ PE
Sbjct: 694 DAICKKAAEMWEEIKKAGFVPDLNSVLHDVDDELKEELLSRHSEKLAIAFGLISTPEKTT 753
Query: 551 IRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
+R+MKNLRVC DCH+AIK ISKV+ REII+RDA RFHHF+DG CSC+DYW
Sbjct: 754 LRIMKNLRVCNDCHTAIKFISKVVDREIIVRDATRFHHFRDGYCSCKDYW 803
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 100/435 (22%), Positives = 190/435 (43%), Gaps = 109/435 (25%)
Query: 82 GRVDEGREIFDEMP--KKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMG 139
G E R +FD++P ++N +W +++S Y + R+ AR +F MPE++ VSWT M++G
Sbjct: 78 GCFHEARRLFDDIPYARRNAFTWNSLLSMYAKSGRLADARVVFAQMPERDAVSWTVMVVG 137
Query: 140 YTQCGRIQDAWELFKAMPMKSVVASNSMI-------------------------LGL--- 171
+ GR DA + F M + + S M+ LGL
Sbjct: 138 LNRAGRFWDAVKTFLDMVGEGLAPSQFMLTNVLSSCAATEARGIGRKVHSFVIKLGLSSC 197
Query: 172 -----------GQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQK 220
G+ G+ + AR VF++M+ + +++W+ M+ +Y +G + +F M++
Sbjct: 198 VPVANSVLYMYGKCGDAETARAVFERMKVRSESSWNAMVSLYTHQGRMDLALSMFENMEE 257
Query: 221 EGVRVNFPSLI---------------------------------SVLSVCASLASLDHGR 247
+ V++ ++I SVLS CA+L L G+
Sbjct: 258 RSI-VSWNAIIAGYNQNGLDDMALKFFSRMLTASSMEPDEFTVTSVLSACANLRMLKMGK 316
Query: 248 QVHAQLVRCQF---------------------------------DVDVYVASVLITMYIK 274
Q+H+ ++R D++V + L+ Y+K
Sbjct: 317 QMHSYILRTGMPYSSQIMNALISTYAKSGSVETARRIMDKAVVADLNVISFTALLEGYVK 376
Query: 275 CGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGV 334
G+ + + +FD ++D++ W ++I GY Q G ++++++F M SG P+ TL V
Sbjct: 377 LGDTKQAREVFDVMNNRDVIAWTAMIVGYEQNGQNDEAMELFRSMIRSGPEPNSHTLAAV 436
Query: 335 LSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEP 394
LSAC+ + G++I + L E ++ + R+G V A ++ + + +
Sbjct: 437 LSACASLAYLGYGKQI-HCRAIRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQICWRK 495
Query: 395 DAIIWGSLLGACRTH 409
+ + W S++ A H
Sbjct: 496 ETVTWTSMIVALAQH 510
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/386 (24%), Positives = 165/386 (42%), Gaps = 84/386 (21%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
M R+ SW AMV Y +G + A ++F M E+++VSW ++ G+ ++ D A + F
Sbjct: 224 MKVRSESSWNAMVSLYTHQGRMDLALSMFENMEERSIVSWNAIIAGYNQNGLDDMALKFF 283
Query: 61 DMM-------PEKDVVAQ---------------------------------TNMVLGYCQ 80
M P++ V ++ Y +
Sbjct: 284 SRMLTASSMEPDEFTVTSVLSACANLRMLKMGKQMHSYILRTGMPYSSQIMNALISTYAK 343
Query: 81 DGRVDEGREIFDE--MPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLM 138
G V+ R I D+ + NVIS+T ++ GYV AR++F+VM ++ ++WTAM++
Sbjct: 344 SGSVETARRIMDKAVVADLNVISFTALLEGYVKLGDTKQAREVFDVMNNRDVIAWTAMIV 403
Query: 139 GYTQCGRIQDAWELFKAM---------------------------------------PMK 159
GY Q G+ +A ELF++M +
Sbjct: 404 GYEQNGQNDEAMELFRSMIRSGPEPNSHTLAAVLSACASLAYLGYGKQIHCRAIRSLQEQ 463
Query: 160 SVVASNSMILGLGQNGEVQKARVVFDQM-REKDDATWSGMIKVYERKGYELEVIDLFTLM 218
SV SN++I ++G V AR VFDQ+ K+ TW+ MI + G + I LF M
Sbjct: 464 SVSVSNAIITVYARSGSVPLARRVFDQICWRKETVTWTSMIVALAQHGLGEQAIVLFEEM 523
Query: 219 QKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDV-DVYVASVLITMYIKCGE 277
+ GV+ + + I V S C +D G++ + Q++ V ++ + ++ + + G
Sbjct: 524 LRVGVKPDRVTYIGVFSACTHAGFIDKGKRYYEQMLNEHGIVPEMSHYACMVDLLARAGL 583
Query: 278 LVKGKLIFDNF-ASKDIVMWNSIISG 302
L + + D V+W S+++
Sbjct: 584 LTEAHEFIQRMPVAPDTVVWGSLLAA 609
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 146/331 (44%), Gaps = 79/331 (23%)
Query: 105 MISGYVNNNRIDV-------------ARKLFEVMP--EKNEVSWTAMLMGYTQCGRIQDA 149
++S Y+ NN + AR+LF+ +P +N +W ++L Y + GR+ DA
Sbjct: 57 LVSAYLCNNLLSYYARAGVGRGCFHEARRLFDDIPYARRNAFTWNSLLSMYAKSGRLADA 116
Query: 150 WELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYEL 209
RVVF QM E+D +W+ M+ R G
Sbjct: 117 -------------------------------RVVFAQMPERDAVSWTVMVVGLNRAGRFW 145
Query: 210 EVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLI 269
+ + F M EG+ + L +VLS CA+ + GR+VH+ +++ V VA+ ++
Sbjct: 146 DAVKTFLDMVGEGLAPSQFMLTNVLSSCAATEARGIGRKVHSFVIKLGLSSCVPVANSVL 205
Query: 270 TMYIKCGELVKGKLI-------------------------------FDNFASKDIVMWNS 298
MY KCG+ + + F+N + IV WN+
Sbjct: 206 YMYGKCGDAETARAVFERMKVRSESSWNAMVSLYTHQGRMDLALSMFENMEERSIVSWNA 265
Query: 299 IISGYAQYGLGEKSLKVFHEMFSSGVM-PDDVTLVGVLSACSYTGKVKEGREIFESMKSK 357
II+GY Q GL + +LK F M ++ M PD+ T+ VLSAC+ +K G+++ S +
Sbjct: 266 IIAGYNQNGLDDMALKFFSRMLTASSMEPDEFTVTSVLSACANLRMLKMGKQM-HSYILR 324
Query: 358 YLVEPKTEHYACMVDLLGRAGQVEDAMKLIE 388
+ ++ ++ ++G VE A ++++
Sbjct: 325 TGMPYSSQIMNALISTYAKSGSVETARRIMD 355
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 86/207 (41%), Gaps = 39/207 (18%)
Query: 246 GRQVHAQLVRCQFDVDVYVASVLITMYIKCGE----LVKGKLIFDN--FASKDIVMWNSI 299
GR +HA V+ V Y+ + L++ Y + G + + +FD+ +A ++ WNS+
Sbjct: 44 GRAIHAHAVKAGLLVSAYLCNNLLSYYARAGVGRGCFHEARRLFDDIPYARRNAFTWNSL 103
Query: 300 ISGYAQYG-----------LGEK--------------------SLKVFHEMFSSGVMPDD 328
+S YA+ G + E+ ++K F +M G+ P
Sbjct: 104 LSMYAKSGRLADARVVFAQMPERDAVSWTVMVVGLNRAGRFWDAVKTFLDMVGEGLAPSQ 163
Query: 329 VTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIE 388
L VLS+C+ T GR++ S K + ++ + G+ G E A + E
Sbjct: 164 FMLTNVLSSCAATEARGIGRKV-HSFVIKLGLSSCVPVANSVLYMYGKCGDAETARAVFE 222
Query: 389 AMPFEPDAIIWGSLLGACRTHMKLDLA 415
M ++ W +++ ++DLA
Sbjct: 223 RMKVRSES-SWNAMVSLYTHQGRMDLA 248
>gi|359481906|ref|XP_003632690.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
mitochondrial-like [Vitis vinifera]
Length = 635
Score = 465 bits (1196), Expect = e-128, Method: Compositional matrix adjust.
Identities = 223/517 (43%), Positives = 342/517 (66%), Gaps = 4/517 (0%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDM 62
++NVV+WTAMV GY+ I++A LF +MP KNVVSW M+ G+ ++ RID A LF+
Sbjct: 112 KKNVVTWTAMVGGYIRSNKISDAEKLFNEMPNKNVVSWNTMIDGYAQNGRIDSAMYLFEK 171
Query: 63 MPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLF 122
MPE++VV+ ++ Q GR++E R +FD MP+++VISWT MI+G N RID AR LF
Sbjct: 172 MPERNVVSWNTVMSMLAQCGRIEEARRLFDRMPERDVISWTAMIAGLSKNGRIDEARLLF 231
Query: 123 EVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARV 182
+ MPE+N VSW AM+ GY Q R+ +A +LF+ MP + + + N+MI GL QNG++++AR
Sbjct: 232 DRMPERNVVSWNAMITGYAQNLRLDEALDLFERMPERDLPSWNTMITGLIQNGDLRRARK 291
Query: 183 VFDQMREKDDATWSGMIKVYERKGYELEVIDLFT-LMQKEGVRVNFPSLISVLSVCASLA 241
+F++M +K+ +W+ MI ++G E + +F+ ++ G + N + +SVL C++LA
Sbjct: 292 LFNEMPKKNVISWTTMITGCVQEGESEEALKIFSRMLSTNGAKPNQGTFVSVLGACSNLA 351
Query: 242 SLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDN--FASKDIVMWNSI 299
L G+QVH + + + +V S LI MY KCGEL + +FD+ + +D+V WN I
Sbjct: 352 GLGEGQQVHQIISKTVYQDSTFVVSALINMYSKCGELGTARKMFDDGMTSQRDLVSWNGI 411
Query: 300 ISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYL 359
I+ YA +G G++++ F EM SG PDDVT VG+LSACS+ G V+EG + F+ +
Sbjct: 412 IAAYAHHGYGKEAINFFKEMRKSGFKPDDVTYVGLLSACSHAGLVEEGLKYFDELVKDRS 471
Query: 360 VEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAA 419
+ + +HYAC+VDL GRAG++++A IE + +P A +WG+LL C H + + + AA
Sbjct: 472 ILVREDHYACLVDLCGRAGRLKEAFGFIERLETKPSARVWGALLAGCNVHANVKIGKQAA 531
Query: 420 KKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMF 479
KKLL++EP+NAG Y+LLSNIYAS G++ + A +R M+ + + K PGCSWIEV +VH+F
Sbjct: 532 KKLLEVEPENAGTYLLLSNIYASTGKWREAARVRLKMKDKGLKKQPGCSWIEVGNRVHVF 591
Query: 480 TGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFV 516
D SH + +I +L + +++AGY P++ F+
Sbjct: 592 VVGD-KSHSQSKLIYSLLRDLHSKMKKAGYEPNNDFI 627
Score = 215 bits (548), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 125/377 (33%), Positives = 210/377 (55%), Gaps = 12/377 (3%)
Query: 36 NVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEM- 94
NV M+ +D RI +ARRLFD M E DV+ T ++ GY + G ++E R +FD +
Sbjct: 51 NVARCNWMITNLSKDGRIMEARRLFDEMREPDVITWTTVISGYIKCGMIEEARRLFDRVD 110
Query: 95 PKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFK 154
KKNV++WT M+ GY+ +N+I A KLF MP KN VSW M+ GY Q GRI A LF+
Sbjct: 111 AKKNVVTWTAMVGGYIRSNKISDAEKLFNEMPNKNVVSWNTMIDGYAQNGRIDSAMYLFE 170
Query: 155 AMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDL 214
MP ++VV+ N+++ L Q G +++AR +FD+M E+D +W+ MI + G E L
Sbjct: 171 KMPERNVVSWNTVMSMLAQCGRIEEARRLFDRMPERDVISWTAMIAGLSKNGRIDEARLL 230
Query: 215 FTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIK 274
F M + N S ++++ A LD + ++ + D+ + +IT I+
Sbjct: 231 FDRMPER----NVVSWNAMITGYAQNLRLDEALDLFERMP----ERDLPSWNTMITGLIQ 282
Query: 275 CGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSS-GVMPDDVTLVG 333
G+L + + +F+ K+++ W ++I+G Q G E++LK+F M S+ G P+ T V
Sbjct: 283 NGDLRRARKLFNEMPKKNVISWTTMITGCVQEGESEEALKIFSRMLSTNGAKPNQGTFVS 342
Query: 334 VLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLI-EAMPF 392
VL ACS + EG+++ + + SK + + T + ++++ + G++ A K+ + M
Sbjct: 343 VLGACSNLAGLGEGQQVHQII-SKTVYQDSTFVVSALINMYSKCGELGTARKMFDDGMTS 401
Query: 393 EPDAIIWGSLLGACRTH 409
+ D + W ++ A H
Sbjct: 402 QRDLVSWNGIIAAYAHH 418
Score = 45.8 bits (107), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 66/142 (46%), Gaps = 15/142 (10%)
Query: 328 DVTLVGVLSACSY-------TGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQV 380
D T+ G ++ C++ G++ E R +F+ M+ EP + ++ + G +
Sbjct: 45 DFTVDGNVARCNWMITNLSKDGRIMEARRLFDEMR-----EPDVITWTTVISGYIKCGMI 99
Query: 381 EDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIY 440
E+A +L + + + + + W +++G K+ AE K ++ KN + + + Y
Sbjct: 100 EEARRLFDRVDAKKNVVTWTAMVGGYIRSNKISDAE---KLFNEMPNKNVVSWNTMIDGY 156
Query: 441 ASQGRFHDVAELRKNMRKRNVI 462
A GR L + M +RNV+
Sbjct: 157 AQNGRIDSAMYLFEKMPERNVV 178
>gi|359484088|ref|XP_002263394.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
Length = 762
Score = 465 bits (1196), Expect = e-128, Method: Compositional matrix adjust.
Identities = 237/546 (43%), Positives = 341/546 (62%), Gaps = 33/546 (6%)
Query: 56 ARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRI 115
A++LF++ +DVV+ M+ GY + + R +FD M ++VISW TMI+GY +I
Sbjct: 249 AKQLFNLCSARDVVSWNAMIDGYVKHVEMGHARMVFDRMVCRDVISWNTMINGYAIVGKI 308
Query: 116 DVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNG 175
D A++LF+ MPE+N VSW +ML G+ +CG ++DA+ LF MP + VV+ NSM+ Q G
Sbjct: 309 DEAKRLFDEMPERNLVSWNSMLAGFVKCGNVEDAFGLFSEMPCRDVVSWNSMLACYAQCG 368
Query: 176 EVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLS 235
+ +A +FDQMR GV+ +++S+LS
Sbjct: 369 KPNEALALFDQMRAV-------------------------------GVKPTEATVVSLLS 397
Query: 236 VCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVM 295
CA L +LD G +H + + +V+ V + L+ MY KCG++ +F+ SKD++
Sbjct: 398 ACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAMESKDVLA 457
Query: 296 WNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMK 355
WN+II+G A +G +++ ++F EM +GV P+D+T V +LSACS+ G V EG+++ + M
Sbjct: 458 WNTIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDITFVAILSACSHAGMVDEGQKLLDCMS 517
Query: 356 SKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLA 415
S Y +EPK EHY C++DLL RAG +E+AM+LI MP EP+ G+LLG CR H +L
Sbjct: 518 SSYGIEPKVEHYGCVIDLLARAGFLEEAMELIGTMPMEPNPSALGALLGGCRIHGNFELG 577
Query: 416 EVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKK 475
E+ K+L+ L+P ++G YILLSNIYA+ ++ D ++R M+ + K PG S IE++
Sbjct: 578 EMVGKRLINLQPCHSGRYILLSNIYAAAKKWDDARKVRNLMKVNGISKVPGVSVIELKGM 637
Query: 476 VHMFTGRDCVSHPEHPMIMRMLEKIGGLLREA-GYCPDSSFVLHDVDEEEKVHSLRYHSE 534
VH F D SHPE I L +I L+ A GY D+ VL D++EE+K H+L HSE
Sbjct: 638 VHRFVAGDW-SHPESNKIYEKLNEIHTRLKSAIGYSADTGNVLLDMEEEDKEHALAVHSE 696
Query: 535 KLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLC 594
KLA+AYGL+ L IR++KNLRVC DCH IKLISKV GREII+RD NRFHHF+DG C
Sbjct: 697 KLAIAYGLLHLDSKEAIRIVKNLRVCRDCHHVIKLISKVYGREIIVRDRNRFHHFEDGEC 756
Query: 595 SCRDYW 600
SC D+W
Sbjct: 757 SCLDFW 762
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 135/279 (48%), Gaps = 39/279 (13%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVV 69
++++ Y + A LF ++VVSW M+ G+++ + AR +FD M +DV+
Sbjct: 234 SSLIHLYANGKDLGAAKQLFNLCSARDVVSWNAMIDGYVKHVEMGHARMVFDRMVCRDVI 293
Query: 70 AQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKN 129
+ M+ GY G++DE + +FDEMP++N++SW +M++G+V ++ A LF MP ++
Sbjct: 294 SWNTMINGYAIVGKIDEAKRLFDEMPERNLVSWNSMLAGFVKCGNVEDAFGLFSEMPCRD 353
Query: 130 EVSWTAMLMGYTQCGRIQDAWELFKAM------PMKSVVAS------------------- 164
VSW +ML Y QCG+ +A LF M P ++ V S
Sbjct: 354 VVSWNSMLACYAQCGKPNEALALFDQMRAVGVKPTEATVVSLLSACAHLGALDKGLHLHT 413
Query: 165 --------------NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELE 210
+++ + G++ A VF+ M KD W+ +I G E
Sbjct: 414 YINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIHGNVKE 473
Query: 211 VIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQV 249
LF M++ GV N + +++LS C+ +D G+++
Sbjct: 474 AQQLFKEMKEAGVEPNDITFVAILSACSHAGMVDEGQKL 512
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 109/227 (48%), Gaps = 11/227 (4%)
Query: 180 ARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCAS 239
A+ +F ++ + ++ +I+ LE + L+ M + G++ + + V+ C
Sbjct: 148 AKTIFHHLQNPPPSLYNSLIRALSSSKTPLEALPLYHTMLQSGLKPDHMTYPFVIKACNE 207
Query: 240 LASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSI 299
+ G VH +V+ F+ D Y+ S LI +Y +L K +F+ +++D+V WN++
Sbjct: 208 SSVTWFGLLVHTHVVKSGFECDSYIVSSLIHLYANGKDLGAAKQLFNLCSARDVVSWNAM 267
Query: 300 ISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYL 359
I GY ++ + VF M V D ++ +++ + GK+ E + +F+ M + L
Sbjct: 268 IDGYVKHVEMGHARMVFDRM----VCRDVISWNTMINGYAIVGKIDEAKRLFDEMPERNL 323
Query: 360 VEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGAC 406
V + M+ + G VEDA L MP D + W S+L AC
Sbjct: 324 VS-----WNSMLAGFVKCGNVEDAFGLFSEMPCR-DVVSWNSML-AC 363
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 105/252 (41%), Gaps = 32/252 (12%)
Query: 225 VNFPSLISVLSVCASLASLDHGRQVHAQLV---RCQFDVDVYVASVLITMYIKCGELVKG 281
N PS +LS+ +L H +QVHAQ++ F + + ++ + L
Sbjct: 91 TNPPSNPQILSLFNPCKTLRHLKQVHAQIITHHNSPFQLSALASLSALSPFPTF--LAYA 148
Query: 282 KLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACS-- 339
K IF + + ++NS+I + ++L ++H M SG+ PD +T V+ AC+
Sbjct: 149 KTIFHHLQNPPPSLYNSLIRALSSSKTPLEALPLYHTMLQSGLKPDHMTYPFVIKACNES 208
Query: 340 ---------YTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAM 390
+T VK G E Y+V YA DL G + L A
Sbjct: 209 SVTWFGLLVHTHVVKSGFEC-----DSYIVSSLIHLYANGKDL----GAAKQLFNLCSAR 259
Query: 391 PFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVA 450
D + W +++ H+++ A + +++ ++ + + N YA G+ +
Sbjct: 260 ----DVVSWNAMIDGYVKHVEMGHARMVFDRMVC---RDVISWNTMINGYAIVGKIDEAK 312
Query: 451 ELRKNMRKRNVI 462
L M +RN++
Sbjct: 313 RLFDEMPERNLV 324
>gi|449464596|ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449529868|ref|XP_004171920.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 734
Score = 465 bits (1196), Expect = e-128, Method: Compositional matrix adjust.
Identities = 251/645 (38%), Positives = 372/645 (57%), Gaps = 48/645 (7%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQM----PEKNVVSWTVMLGGFIRDSRIDDARR 58
E N+ W +M+RG A F +M E N ++ +L + + + ++
Sbjct: 91 EPNLFIWNSMIRGLSMSLSPALALVFFVRMIYSGVEPNSYTFPFLLKSCAKLASAHEGKQ 150
Query: 59 LFDMMPE----KDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNR 114
+ + + DV T+++ Y Q G ++ + +FD+ ++ IS+T +I+GY
Sbjct: 151 IHAHVLKLGFVSDVFIHTSLINMYAQSGEMNNAQLVFDQSNFRDAISFTALIAGYALWGY 210
Query: 115 IDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAM------PMKSVVAS---- 164
+D AR+LF+ MP K+ VSW AM+ GY Q GR ++A LF+ M P +S + S
Sbjct: 211 MDRARQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPNESTIVSVLSA 270
Query: 165 -----------------------------NSMILGLGQNGEVQKARVVFDQMREKDDATW 195
N++I + G++Q AR +FD M E+D +W
Sbjct: 271 CAQSNALDLGNSMRSWIEDRGLCSNLKLVNALIDMYSKCGDLQTARELFDDMLERDVISW 330
Query: 196 SGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVR 255
+ MI Y E + LF M GV + +S+L CA L ++D G+ +HA + +
Sbjct: 331 NVMIGGYTHMCSYKEALALFREMLASGVEPTEITFLSILPSCAHLGAIDLGKWIHAYINK 390
Query: 256 CQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKV 315
V +++ LI +Y KCG +V + +FD K + WN++I G A +G +K+ ++
Sbjct: 391 NFNSVSTSLSTSLIDLYAKCGNIVAARQVFDGMKIKSLASWNAMICGLAMHGQADKAFEL 450
Query: 316 FHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLG 375
F +M S G+ P+++T VG+LSAC + G V G++ F SM Y + PK++HY CM+DLLG
Sbjct: 451 FSKMSSDGIEPNEITFVGILSACKHAGLVDLGQQFFSSMVQDYKISPKSQHYGCMIDLLG 510
Query: 376 RAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYIL 435
RAG E+A L++ M +PD IWGSLLGACR H +++L E+ A++L +LEP N G Y+L
Sbjct: 511 RAGLFEEAESLLQNMEVKPDGAIWGSLLGACRDHGRVELGELVAERLFELEPDNPGAYVL 570
Query: 436 LSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMR 495
LSNIYA G++ DVA +R + R + K PGC+ IEV+ VH F D V HP+ I R
Sbjct: 571 LSNIYAGAGKWDDVARIRTRLNDRGMKKVPGCTTIEVDNVVHEFLVGDKV-HPQSEDIYR 629
Query: 496 MLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMK 555
MLE++ L+ G+ D+S VL+D+DEE K +L +HSEKLA+A+GL+ G PIR++K
Sbjct: 630 MLEEVDEQLKVFGFVADTSEVLYDMDEEWKEGALSHHSEKLAIAFGLISTKPGTPIRIIK 689
Query: 556 NLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
NLRVC +CHSA KLISK+ REII RD NRFHHFKDG CSC DYW
Sbjct: 690 NLRVCRNCHSATKLISKIFNREIIARDRNRFHHFKDGSCSCNDYW 734
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 127/513 (24%), Positives = 223/513 (43%), Gaps = 94/513 (18%)
Query: 6 VVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPE 65
++ ++A+ R G I+ A +LF + E N+ W M+ G A F M
Sbjct: 67 LIEFSAVSR----SGDISYAISLFNSIEEPNLFIWNSMIRGLSMSLSPALALVFFVRMIY 122
Query: 66 KDVVAQT---NMVLGYCQD-GRVDEGREIFDEMPKKNVIS----WTTMISGYVNNNRIDV 117
V + +L C EG++I + K +S T++I+ Y + ++
Sbjct: 123 SGVEPNSYTFPFLLKSCAKLASAHEGKQIHAHVLKLGFVSDVFIHTSLINMYAQSGEMNN 182
Query: 118 ARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEV 177
A+ +F+ ++ +S+TA++ GY G + A +LF MP+K VV+ N+MI G Q G
Sbjct: 183 AQLVFDQSNFRDAISFTALIAGYALWGYMDRARQLFDEMPVKDVVSWNAMIAGYAQMGRS 242
Query: 178 QKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVC 237
++A ++F+ MR K V N +++SVLS C
Sbjct: 243 KEALLLFEDMR-------------------------------KANVPPNESTIVSVLSAC 271
Query: 238 ASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWN 297
A +LD G + + + ++ + + LI MY KCG+L + +FD+ +D++ WN
Sbjct: 272 AQSNALDLGNSMRSWIEDRGLCSNLKLVNALIDMYSKCGDLQTARELFDDMLERDVISWN 331
Query: 298 SIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEG---------- 347
+I GY +++L +F EM +SGV P ++T + +L +C++ G + G
Sbjct: 332 VMIGGYTHMCSYKEALALFREMLASGVEPTEITFLSILPSCAHLGAIDLGKWIHAYINKN 391
Query: 348 -------------------------REIFESMKSKYLVEPKTEHYACMVDLLGRAGQVED 382
R++F+ MK K L + M+ L GQ +
Sbjct: 392 FNSVSTSLSTSLIDLYAKCGNIVAARQVFDGMKIKSLAS-----WNAMICGLAMHGQADK 446
Query: 383 AMKLIEAMP---FEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQ---LEPKNAGPYILL 436
A +L M EP+ I + +L AC+ +DL + ++Q + PK+ Y +
Sbjct: 447 AFELFSKMSSDGIEPNEITFVGILSACKHAGLVDLGQQFFSSMVQDYKISPKSQ-HYGCM 505
Query: 437 SNIYASQGRFHDVAELRKNMRKRNVIKPPGCSW 469
++ G F + L +NM +KP G W
Sbjct: 506 IDLLGRAGLFEEAESLLQNME----VKPDGAIW 534
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 99/404 (24%), Positives = 172/404 (42%), Gaps = 55/404 (13%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV----VSWTVMLGGFIRDSRIDDA 56
MP ++VVSW AM+ GY + G EA LF M + NV + +L + + +D
Sbjct: 221 MPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPNESTIVSVLSACAQSNALDLG 280
Query: 57 RRLFDMMPEKDVVAQTNMVLG----YCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+ + ++ + + +V Y + G + RE+FD+M +++VISW MI GY +
Sbjct: 281 NSMRSWIEDRGLCSNLKLVNALIDMYSKCGDLQTARELFDDMLERDVISWNVMIGGYTHM 340
Query: 113 NRIDVARKLFEVM----PEKNEVSWTAML-----MGYTQCGRIQDAWELFKAMPMKSVVA 163
A LF M E E+++ ++L +G G+ A+ + K S
Sbjct: 341 CSYKEALALFREMLASGVEPTEITFLSILPSCAHLGAIDLGKWIHAY-INKNFNSVSTSL 399
Query: 164 SNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGV 223
S S+I + G + AR VFD M+ K A+W+ MI G + +LF+ M +G+
Sbjct: 400 STSLIDLYAKCGNIVAARQVFDGMKIKSLASWNAMICGLAMHGQADKAFELFSKMSSDGI 459
Query: 224 RVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKL 283
N + + +LS C +D G+Q + +V+
Sbjct: 460 EPNEITFVGILSACKHAGLVDLGQQFFSSMVQ---------------------------- 491
Query: 284 IFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGK 343
D S + +I + GL E++ + M V PD +L AC G+
Sbjct: 492 --DYKISPKSQHYGCMIDLLGRAGLFEEAESLLQNM---EVKPDGAIWGSLLGACRDHGR 546
Query: 344 VKEGREIFESMKSKYLVEPKTE-HYACMVDLLGRAGQVEDAMKL 386
V+ G + E + + +EP Y + ++ AG+ +D ++
Sbjct: 547 VELGELVAERL---FELEPDNPGAYVLLSNIYAGAGKWDDVARI 587
>gi|449443492|ref|XP_004139511.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Cucumis sativus]
Length = 678
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 229/545 (42%), Positives = 349/545 (64%), Gaps = 12/545 (2%)
Query: 65 EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEV 124
E D+V ++ Y + G ++E +++FD+MP K+++SWT +ISGY + + A LF
Sbjct: 137 EDDLVLLNFILNMYAKCGSLEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPK 196
Query: 125 MP----EKNEVSWTAMLMGY-----TQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNG 175
M + NE + +++L GR A+ L M V S S++ +
Sbjct: 197 MLHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYDMNVHVGS-SLLDMYARWA 255
Query: 176 EVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLS 235
+++A+V+F+ + K+ +W+ +I + RKG V+ LF M ++G + SV +
Sbjct: 256 HMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFT 315
Query: 236 VCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVM 295
CAS SL+ G+ VHA +++ Y+ + LI MY K G + K +F +DIV
Sbjct: 316 ACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVS 375
Query: 296 WNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMK 355
WNSIISGYAQ+GLG ++L++F +M + V P+++T + VL+ACS++G + EG+ FE MK
Sbjct: 376 WNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMK 435
Query: 356 SKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLA 415
K+ +E + H+ +VDLLGRAG++ +A K IE MP +P A +WG+LLG+CR H +DL
Sbjct: 436 -KHKIEAQVAHHVTVVDLLGRAGRLNEANKFIEEMPIKPTAAVWGALLGSCRMHKNMDLG 494
Query: 416 EVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKK 475
AA+++ +L+P ++GP++LLSNIYAS GR D A++RK M++ V K P CSW+E+E +
Sbjct: 495 VYAAEQIFELDPHDSGPHVLLSNIYASAGRLSDAAKVRKMMKESGVKKEPACSWVEIENE 554
Query: 476 VHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEK 535
VH+F D SHP I RM EKI G ++E GY PD+S VL ++++++ L+YHSEK
Sbjct: 555 VHVFVAND-DSHPMREEIQRMWEKISGKIKEIGYVPDTSHVLFFMNQQDRELKLQYHSEK 613
Query: 536 LAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCS 595
LA+A+ ++K P G+ IR+ KN+R+CGDCHSA K S+V+GREII+RD NRFHHF G+CS
Sbjct: 614 LALAFAVLKTPPGLTIRIKKNIRICGDCHSAFKFASRVLGREIIVRDTNRFHHFLHGMCS 673
Query: 596 CRDYW 600
CRDYW
Sbjct: 674 CRDYW 678
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/321 (21%), Positives = 143/321 (44%), Gaps = 25/321 (7%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDA---- 56
MP +++VSWT ++ GY + G +EA LF +M L ++ S +
Sbjct: 166 MPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHG 225
Query: 57 RRL--------FDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISG 108
R+L +DM +V ++++ Y + + E + IF+ + KNV+SW +I+G
Sbjct: 226 RQLHAFSLKYGYDM----NVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAG 281
Query: 109 YVNNNRIDVARKLFEVMP----EKNEVSWTAMLMGYTQCGRI-QDAW---ELFKAMPMKS 160
+ + +LF M E +++++ G + Q W + K+
Sbjct: 282 HARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKSGGQPI 341
Query: 161 VVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQK 220
N++I ++G ++ A+ VF ++ ++D +W+ +I Y + G E + LF M K
Sbjct: 342 AYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLK 401
Query: 221 EGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVK 280
V+ N + +SVL+ C+ LD G+ + + + + V ++ + + G L +
Sbjct: 402 AKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKHKIEAQVAHHVTVVDLLGRAGRLNE 461
Query: 281 GKLIFDNFASKDI-VMWNSII 300
+ K +W +++
Sbjct: 462 ANKFIEEMPIKPTAAVWGALL 482
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 129/298 (43%), Gaps = 57/298 (19%)
Query: 209 LEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVL 268
L V+DL E R + + L+ C L L GR +HA + F+ D+ + + +
Sbjct: 90 LYVLDLINCGSLEPERTLYSKM---LNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFI 146
Query: 269 ITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDD 328
+ MY KCG L + + +FD +KD+V W +ISGY+Q G ++L +F +M G P++
Sbjct: 147 LNMYAKCGSLEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNE 206
Query: 329 VTLVGVLSACSYTG------------------------------------KVKEGREIFE 352
TL +L A S TG ++E + IF
Sbjct: 207 FTLSSLLKA-SGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFN 265
Query: 353 SMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAM---PFEPDAIIWGSLLGACRTH 409
S+ +K +V + ++ R G+ E M+L M FEP + S+ AC +
Sbjct: 266 SLAAKNVVS-----WNALIAGHARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASS 320
Query: 410 MKLDLAEVAAKKLLQLEPKNAGPYI-----LLSNIYASQGRFHDVAELRKNMRKRNVI 462
L+ + ++ K+ G I L ++YA G D ++ + + K++++
Sbjct: 321 GSLEQGKWVHAHVI----KSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIV 374
>gi|359480846|ref|XP_002280702.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Vitis vinifera]
Length = 785
Score = 464 bits (1194), Expect = e-128, Method: Compositional matrix adjust.
Identities = 240/603 (39%), Positives = 376/603 (62%), Gaps = 13/603 (2%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVV 69
+++ Y + G A +F +M K+ SW M+ ++ +D A+ F+ M E+DVV
Sbjct: 184 NSLLNMYAKSGDPVTAKIVFDRMKLKSTSSWNTMISSHMQSGLVDLAQVQFEQMIERDVV 243
Query: 70 AQTNMVLGYCQDGRVDEGREIFDEM-----PKKNVISWTTMISGYVNNNRIDVARKLFEV 124
+ M+ GY Q G E +IF +M K + + + +S N + + +++
Sbjct: 244 SWNAMISGYNQHGFDREALDIFSKMLMDSSSKPDKFTLASALSACANLENLKLGKQIHAH 303
Query: 125 MPEKNEVSW----TAMLMGYTQCGRIQDAWELFKAMPMKS--VVASNSMILGLGQNGEVQ 178
+ ++ A++ Y++ G ++ A ++ + + + V+A +++ G + G++
Sbjct: 304 IIRTEFDTFGAVGNALISMYSKSGGVEIAQKIIEQSMISNLDVIAFTALLDGYVKLGDIN 363
Query: 179 KARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCA 238
AR +FD +R +D W+ MI Y + G+ + ++LF M KEG + N +L ++LSV +
Sbjct: 364 PARRIFDSLRVRDVVAWTAMIVGYVQNGFNQDAMELFRSMIKEGPKPNNYTLATMLSVSS 423
Query: 239 SLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFA-SKDIVMWN 297
SLASLDHGRQ+HA R V V++ LITMY K G + + +F+ +D + W
Sbjct: 424 SLASLDHGRQIHASATRSGNASSVSVSNALITMYAKSGSINDARWVFNLIHWKRDTITWT 483
Query: 298 SIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSK 357
S+I AQ+GLGE++L +F M +G+ PD +T VGVLSAC++ G V++GR + M++
Sbjct: 484 SMIIALAQHGLGEEALTLFERMLENGIKPDHITYVGVLSACTHVGLVEQGRSYYNLMQNA 543
Query: 358 YLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEV 417
+ + P HYACM+DL GRAG +++A IE MP EPD I WGSLL +C+ H ++LAEV
Sbjct: 544 HKIIPTPSHYACMIDLFGRAGLLQEAHAFIENMPIEPDVIAWGSLLASCKVHKNVELAEV 603
Query: 418 AAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVH 477
AA++LL +EP+N+G Y L+N+Y++ G++ + A +RK+M+ + V K G SW++++ KVH
Sbjct: 604 AAERLLLIEPENSGAYSALANVYSACGQWENAANIRKSMKDKGVKKDQGFSWVQIKNKVH 663
Query: 478 MFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLA 537
+F G D HP+ I M+ KI +++ G+ PD+ VLHD++EE K L +HSEKLA
Sbjct: 664 IF-GVDDGLHPQRDAIYEMMAKIWKEIKKMGFVPDTESVLHDLEEELKEQILSHHSEKLA 722
Query: 538 VAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCR 597
+A+GL+ PE +R+MKNLRVC DCHSAIK ISK++GREII+RDA RFHHFK+GLCSCR
Sbjct: 723 IAFGLICTPENTTLRIMKNLRVCNDCHSAIKFISKLVGREIIVRDATRFHHFKNGLCSCR 782
Query: 598 DYW 600
DYW
Sbjct: 783 DYW 785
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 121/436 (27%), Positives = 217/436 (49%), Gaps = 43/436 (9%)
Query: 16 YVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMV 75
Y + G I +A +F +MP K+V SW ++L G+ + R+++A R+F+ MPE D V+ T M+
Sbjct: 58 YAKTGFIYDAHRVFDEMPVKSVFSWNIILSGYAKGGRLEEAHRVFEEMPEPDSVSWTAMI 117
Query: 76 LGYCQDGRVDEGREIFDEMPKKNV----ISWTTMISGYVNNNRIDVARKLFEVMPEKNEV 131
+GY Q G+ + +F EM +V + T +++ + + RK+ + +
Sbjct: 118 VGYNQMGQFENAIGMFREMVSDDVPPTQFTLTNVLASCAAVECLGIGRKVHSFVVKHGLS 177
Query: 132 SW----TAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQM 187
S+ ++L Y + G A +F M +KS + N+MI Q+G V A+V F+QM
Sbjct: 178 SYISVANSLLNMYAKSGDPVTAKIVFDRMKLKSTSSWNTMISSHMQSGLVDLAQVQFEQM 237
Query: 188 REKDDATWSGMIKVYERKGYELEVIDLFT-LMQKEGVRVNFPSLISVLSVCASLASLDHG 246
E+D +W+ MI Y + G++ E +D+F+ ++ + + +L S LS CA+L +L G
Sbjct: 238 IERDVVSWNAMISGYNQHGFDREALDIFSKMLMDSSSKPDKFTLASALSACANLENLKLG 297
Query: 247 RQVHAQLVRCQFDVDVYVASVLITM---------------------------------YI 273
+Q+HA ++R +FD V + LI+M Y+
Sbjct: 298 KQIHAHIIRTEFDTFGAVGNALISMYSKSGGVEIAQKIIEQSMISNLDVIAFTALLDGYV 357
Query: 274 KCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVG 333
K G++ + IFD+ +D+V W ++I GY Q G + ++++F M G P++ TL
Sbjct: 358 KLGDINPARRIFDSLRVRDVVAWTAMIVGYVQNGFNQDAMELFRSMIKEGPKPNNYTLAT 417
Query: 334 VLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFE 393
+LS S + GR+I S + A ++ + ++G + DA + + ++
Sbjct: 418 MLSVSSSLASLDHGRQIHASATRSGNASSVSVSNA-LITMYAKSGSINDARWVFNLIHWK 476
Query: 394 PDAIIWGSLLGACRTH 409
D I W S++ A H
Sbjct: 477 RDTITWTSMIIALAQH 492
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 100/393 (25%), Positives = 172/393 (43%), Gaps = 76/393 (19%)
Query: 103 TTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVV 162
+++ Y I A ++F+ MP K+ SW +L GY + GR+++A +F+ MP V
Sbjct: 52 NNLMNFYAKTGFIYDAHRVFDEMPVKSVFSWNIILSGYAKGGRLEEAHRVFEEMPEPDSV 111
Query: 163 ASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEG 222
+ +MI+G Q G+ + A I +F M +
Sbjct: 112 SWTAMIVGYNQMGQFENA-------------------------------IGMFREMVSDD 140
Query: 223 VRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGK 282
V +L +VL+ CA++ L GR+VH+ +V+ + VA+ L+ MY K G+ V K
Sbjct: 141 VPPTQFTLTNVLASCAAVECLGIGRKVHSFVVKHGLSSYISVANSLLNMYAKSGDPVTAK 200
Query: 283 LIFDNFASK-------------------------------DIVMWNSIISGYAQYGLGEK 311
++FD K D+V WN++ISGY Q+G +
Sbjct: 201 IVFDRMKLKSTSSWNTMISSHMQSGLVDLAQVQFEQMIERDVVSWNAMISGYNQHGFDRE 260
Query: 312 SLKVFHEMF-SSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYA-- 368
+L +F +M S PD TL LSAC+ +K G++I +++ + + +
Sbjct: 261 ALDIFSKMLMDSSSKPDKFTLASALSACANLENLKLGKQI-----HAHIIRTEFDTFGAV 315
Query: 369 --CMVDLLGRAGQVEDAMKLIE-AMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQL 425
++ + ++G VE A K+IE +M D I + +LL ++KL A + L
Sbjct: 316 GNALISMYSKSGGVEIAQKIIEQSMISNLDVIAFTALLDG---YVKLGDINPARRIFDSL 372
Query: 426 EPKNAGPYILLSNIYASQGRFHDVAELRKNMRK 458
++ + + Y G D EL ++M K
Sbjct: 373 RVRDVVAWTAMIVGYVQNGFNQDAMELFRSMIK 405
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/210 (20%), Positives = 91/210 (43%), Gaps = 33/210 (15%)
Query: 246 GRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYA- 304
G+ +HA++++ + V++ + L+ Y K G + +FD K + WN I+SGYA
Sbjct: 32 GKSIHARIIKAGLHLGVFLMNNLMNFYAKTGFIYDAHRVFDEMPVKSVFSWNIILSGYAK 91
Query: 305 ------------------------------QYGLGEKSLKVFHEMFSSGVMPDDVTLVGV 334
Q G E ++ +F EM S V P TL V
Sbjct: 92 GGRLEEAHRVFEEMPEPDSVSWTAMIVGYNQMGQFENAIGMFREMVSDDVPPTQFTLTNV 151
Query: 335 LSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEP 394
L++C+ + GR++ S K+ + ++++ ++G A + + M +
Sbjct: 152 LASCAAVECLGIGRKV-HSFVVKHGLSSYISVANSLLNMYAKSGDPVTAKIVFDRMKLKS 210
Query: 395 DAIIWGSLLGACRTHMKLDLAEVAAKKLLQ 424
+ W +++ + +DLA+V +++++
Sbjct: 211 TS-SWNTMISSHMQSGLVDLAQVQFEQMIE 239
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 86/173 (49%), Gaps = 15/173 (8%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV----VSWTVMLGGFIRDSRIDDARR 58
+R+ ++WT+M+ + G+ EA TLF +M E + +++ +L ++ R
Sbjct: 476 KRDTITWTSMIIALAQHGLGEEALTLFERMLENGIKPDHITYVGVLSACTHVGLVEQGRS 535
Query: 59 LFDMMPEKDVVAQTN-----MVLGYCQDGRVDEGREIFDEMP-KKNVISWTTMISGYVNN 112
+++M + T M+ + + G + E + MP + +VI+W ++++ +
Sbjct: 536 YYNLMQNAHKIIPTPSHYACMIDLFGRAGLLQEAHAFIENMPIEPDVIAWGSLLASCKVH 595
Query: 113 NRIDV----ARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSV 161
+++ A +L + PE N +++A+ Y+ CG+ ++A + K+M K V
Sbjct: 596 KNVELAEVAAERLLLIEPE-NSGAYSALANVYSACGQWENAANIRKSMKDKGV 647
>gi|297740136|emb|CBI30318.3| unnamed protein product [Vitis vinifera]
Length = 861
Score = 464 bits (1193), Expect = e-128, Method: Compositional matrix adjust.
Identities = 255/648 (39%), Positives = 375/648 (57%), Gaps = 53/648 (8%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVM----------LGGFIRD 50
M ER++V+WT M+ GY E G E+ LF +M E+ VV V LG +
Sbjct: 219 MQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKA 278
Query: 51 SRIDD--ARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISG 108
IDD R+ F + DV+ T M+ Y + G V+ REIFD M +KNVISW+ MI+
Sbjct: 279 RIIDDYIQRKKFQL----DVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAA 334
Query: 109 YVNNNRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAMP----MKS 160
Y + + A LF +M ++++ ++L C + ++ +++
Sbjct: 335 YGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACINCRNLTQVRQVHAQASVHGMLQN 394
Query: 161 VVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKG-------------- 206
++ +N ++ + A +FD M +D +WS M+ + + G
Sbjct: 395 LIVANKLVHFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYMNCFGTFRELIR 454
Query: 207 -------YEL-------EVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQ 252
Y L E + LF M++EGV + ++++V+ CA L ++ R +
Sbjct: 455 CGARPDNYTLPFCGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDY 514
Query: 253 LVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKS 312
+ R +F +DV + + +I M+ KCG + + IFD K+++ W+++I+ Y +G G K+
Sbjct: 515 IQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKA 574
Query: 313 LKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVD 372
L +F M SG++P+ +TLV +L ACS+ G V+EG F M Y V +HY C+VD
Sbjct: 575 LDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSLMWEDYSVRADVKHYTCVVD 634
Query: 373 LLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGP 432
LLGRAG++++A+KLIE+M E D +WG+ LGACRTH + LAE AA LL+L+P+N G
Sbjct: 635 LLGRAGRLDEALKLIESMTVEKDEGLWGAFLGACRTHKDVVLAEKAATSLLELQPQNPGH 694
Query: 433 YILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPM 492
YILLSNIYA+ GR+ DVA+ R M +R + K PG +WIEV+ K H F+ D +HP
Sbjct: 695 YILLSNIYANAGRWEDVAKTRDLMSQRRLKKIPGWTWIEVDNKSHQFSVGD-TTHPRSKE 753
Query: 493 IMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIR 552
I ML+ +G L GY PD++FVLHDVDEE K+ L HSEKLA+A+GL+ PE PIR
Sbjct: 754 IYEMLKSLGNKLELVGYVPDTNFVLHDVDEELKIGILYSHSEKLAIAFGLIATPEHTPIR 813
Query: 553 VMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
++KNLRVCGDCH+ KL+S + GR II+RDANRFHHFK+G CSC DYW
Sbjct: 814 IIKNLRVCGDCHTFCKLVSAITGRVIIVRDANRFHHFKEGACSCGDYW 861
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 119/460 (25%), Positives = 206/460 (44%), Gaps = 58/460 (12%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIR--------------- 49
N+V ++ Y + +A LF M ++ VSW+VM+GGF +
Sbjct: 112 NIVVANKLIYFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYINCFGTFRELI 171
Query: 50 --DSRIDDARRLFDMMPEKDVVA-QTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMI 106
+R D+ F + +D+ Q +V Y + +++ R +FD+M ++++++WT MI
Sbjct: 172 RCGARPDNYTLPFVIRACRDLKNLQMALVDMYVKCREIEDARFLFDKMQERDLVTWTVMI 231
Query: 107 SGYVNNNRIDVARKLFEVMPEKN---------EVSWTAMLMGYTQCGRIQDAWELFKAMP 157
GY + + + LFE M E+ V + +G RI D + K
Sbjct: 232 GGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQ 291
Query: 158 MKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTL 217
+ V+ +MI + G V+ AR +FD+M EK+ +WS MI Y G + +DLF +
Sbjct: 292 L-DVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRM 350
Query: 218 MQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGE 277
M G+ + +L S+L C + +L RQVHAQ ++ VA+ L+ Y
Sbjct: 351 MLSSGMLPDKITLASLLYACINCRNLTQVRQVHAQASVHGMLQNLIVANKLVHFYSYYRA 410
Query: 278 LVKGKLIFDNFASKDIVMWNSIISGYAQY----------------------------GLG 309
L +FD +D V W+ ++ G+A+ G
Sbjct: 411 LDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYMNCFGTFRELIRCGARPDNYTLPFCGNA 470
Query: 310 EKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYAC 369
+SL +F +M GV+PD V +V V+ AC+ G + + R I + ++ K +
Sbjct: 471 NESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKF-QLDVILGTA 529
Query: 370 MVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTH 409
M+D+ + G VE A ++ + M E + I W +++ A H
Sbjct: 530 MIDMHAKCGCVESAREIFDRME-EKNVISWSAMIAAYGYH 568
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 117/252 (46%), Gaps = 23/252 (9%)
Query: 158 MKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTL 217
++++V +N +I + A +FD M +D +WS M+ + + G + F
Sbjct: 110 LENIVVANKLIYFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYINCFGTFRE 169
Query: 218 MQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGE 277
+ + G R + +L V+ C L +L L+ MY+KC E
Sbjct: 170 LIRCGARPDNYTLPFVIRACRDLKNLQMA---------------------LVDMYVKCRE 208
Query: 278 LVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSA 337
+ + +FD +D+V W +I GYA+ G +SL +F +M GV+PD V +V V+ A
Sbjct: 209 IEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFA 268
Query: 338 CSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAI 397
C+ G + + R I + ++ K + M+D+ + G VE A ++ + M E + I
Sbjct: 269 CAKLGAMHKARIIDDYIQRKKF-QLDVILGTAMIDMYAKCGCVESAREIFDRME-EKNVI 326
Query: 398 IWGSLLGACRTH 409
W +++ A H
Sbjct: 327 SWSAMIAAYGYH 338
>gi|356502620|ref|XP_003520116.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Glycine max]
Length = 785
Score = 463 bits (1192), Expect = e-127, Method: Compositional matrix adjust.
Identities = 232/603 (38%), Positives = 375/603 (62%), Gaps = 13/603 (2%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVV 69
+++ Y + G A +F +M K+ +W M+ ++ + D A LFD M + D+V
Sbjct: 184 NSLLNMYAKCGDSVMAKVVFDRMRLKDTSTWNTMISMHMQFCQFDLALALFDQMTDPDIV 243
Query: 70 AQTNMVLGYCQDGRVDEGREIFDEMPKKNVI-----SWTTMISGYVNNNRIDVARKLF-E 123
+ +++ GYC G E F M K + + + +++S N + + +++
Sbjct: 244 SWNSIITGYCHQGYDIRALETFSFMLKSSSLKPDKFTLGSVLSACANRESLKLGKQIHAH 303
Query: 124 VMPEKNEVSW---TAMLMGYTQCGRIQDAWELFK--AMPMKSVVASNSMILGLGQNGEVQ 178
++ +++ A++ Y + G ++ A + + P +V+A S++ G + G++
Sbjct: 304 IVRADVDIAGAVGNALISMYAKSGAVEVAHRIVEITGTPSLNVIAFTSLLDGYFKIGDID 363
Query: 179 KARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCA 238
AR +FD ++ +D W+ MI Y + G + + LF LM +EG + N +L +VLSV +
Sbjct: 364 PARAIFDSLKHRDVVAWTAMIVGYAQNGLISDALVLFRLMIREGPKPNNYTLAAVLSVIS 423
Query: 239 SLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFAS-KDIVMWN 297
SLASLDHG+Q+HA +R + V V + LITMY + G + + IF++ S +D + W
Sbjct: 424 SLASLDHGKQLHAVAIRLEEVSSVSVGNALITMYSRSGSIKDARKIFNHICSYRDTLTWT 483
Query: 298 SIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSK 357
S+I AQ+GLG +++++F +M + PD +T VGVLSAC++ G V++G+ F MK+
Sbjct: 484 SMILSLAQHGLGNEAIELFEKMLRINLKPDHITYVGVLSACTHVGLVEQGKSYFNLMKNV 543
Query: 358 YLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEV 417
+ +EP + HYACM+DLLGRAG +E+A I MP EPD + WGSLL +CR H +DLA+V
Sbjct: 544 HNIEPTSSHYACMIDLLGRAGLLEEAYNFIRNMPIEPDVVAWGSLLSSCRVHKYVDLAKV 603
Query: 418 AAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVH 477
AA+KLL ++P N+G Y+ L+N ++ G++ D A++RK+M+ + V K G SW++++ KVH
Sbjct: 604 AAEKLLLIDPNNSGAYLALANTLSACGKWEDAAKVRKSMKDKAVKKEQGFSWVQIKNKVH 663
Query: 478 MFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLA 537
+F D + HP+ I M+ KI +++ G+ PD++ VLHD+++E K LR+HSEKLA
Sbjct: 664 IFGVEDAL-HPQRDAIYCMISKIWKEIKKMGFIPDTNSVLHDLEQEVKEQILRHHSEKLA 722
Query: 538 VAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCR 597
+A+ L+ P+ +R+MKNLRVC DCHSAI+ IS ++ REII+RDA RFHHFKDG CSC+
Sbjct: 723 IAFALINTPKHTTVRIMKNLRVCNDCHSAIRYISLLVEREIIVRDATRFHHFKDGSCSCQ 782
Query: 598 DYW 600
DYW
Sbjct: 783 DYW 785
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 120/447 (26%), Positives = 203/447 (45%), Gaps = 65/447 (14%)
Query: 16 YVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMV 75
YV+ G ++A LF +MP K SW +L + +D ARR+FD +P+ D V+ T M+
Sbjct: 58 YVKTGSSSDAHRLFDEMPLKTTFSWNTILSAHAKAGNLDSARRVFDEIPQPDSVSWTTMI 117
Query: 76 LGYCQDGRVDEGREIFDEMPKKNV----ISWTTMISGYVNNNRIDVARKLFE-------- 123
+GY G F M + ++T +++ +DV +K+
Sbjct: 118 VGYNHLGLFKSAVHAFLRMVSSGISPTQFTFTNVLASCAAAQALDVGKKVHSFVVKLGQS 177
Query: 124 -VMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARV 182
V+P N ++L Y +CG A +F M +K N+MI Q + A
Sbjct: 178 GVVPVAN-----SLLNMYAKCGDSVMAKVVFDRMRLKDTSTWNTMISMHMQFCQFDLALA 232
Query: 183 VFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQK-EGVRVNFPSLISVLSVCASLA 241
+FDQM + D +W+ +I Y +GY++ ++ F+ M K ++ + +L SVLS CA+
Sbjct: 233 LFDQMTDPDIVSWNSIITGYCHQGYDIRALETFSFMLKSSSLKPDKFTLGSVLSACANRE 292
Query: 242 SLDHGRQVHAQLVRCQFDVDVYVASVLITM------------------------------ 271
SL G+Q+HA +VR D+ V + LI+M
Sbjct: 293 SLKLGKQIHAHIVRADVDIAGAVGNALISMYAKSGAVEVAHRIVEITGTPSLNVIAFTSL 352
Query: 272 ---YIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDD 328
Y K G++ + IFD+ +D+V W ++I GYAQ GL +L +F M G P++
Sbjct: 353 LDGYFKIGDIDPARAIFDSLKHRDVVAWTAMIVGYAQNGLISDALVLFRLMIREGPKPNN 412
Query: 329 VTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYA------CMVDLLGRAGQVED 382
TL VLS S + G+++ + V + E + ++ + R+G ++D
Sbjct: 413 YTLAAVLSVISSLASLDHGKQL-------HAVAIRLEEVSSVSVGNALITMYSRSGSIKD 465
Query: 383 AMKLIEAMPFEPDAIIWGSLLGACRTH 409
A K+ + D + W S++ + H
Sbjct: 466 ARKIFNHICSYRDTLTWTSMILSLAQH 492
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 87/339 (25%), Positives = 138/339 (40%), Gaps = 64/339 (18%)
Query: 82 GRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYT 141
GR R I + V +++ YV A +LF+ MP K SW +L +
Sbjct: 31 GRCIHARIIKHGLRYLGVFLTNNLLNLYVKTGSSSDAHRLFDEMPLKTTFSWNTILSAHA 90
Query: 142 QCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKV 201
+ G + A +F +P V+ W+ MI
Sbjct: 91 KAGNLDSARRVFDEIPQPDSVS-------------------------------WTTMIVG 119
Query: 202 YERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVD 261
Y G + F M G+ + +VL+ CA+ +LD G++VH+ +V+
Sbjct: 120 YNHLGLFKSAVHAFLRMVSSGISPTQFTFTNVLASCAAAQALDVGKKVHSFVVKLGQSGV 179
Query: 262 VYVASVLITMYIKCGELVKGKLIFDNFASK------------------------------ 291
V VA+ L+ MY KCG+ V K++FD K
Sbjct: 180 VPVANSLLNMYAKCGDSVMAKVVFDRMRLKDTSTWNTMISMHMQFCQFDLALALFDQMTD 239
Query: 292 -DIVMWNSIISGYAQYGLGEKSLKVFHEMF-SSGVMPDDVTLVGVLSACSYTGKVKEGRE 349
DIV WNSII+GY G ++L+ F M SS + PD TL VLSAC+ +K G++
Sbjct: 240 PDIVSWNSIITGYCHQGYDIRALETFSFMLKSSSLKPDKFTLGSVLSACANRESLKLGKQ 299
Query: 350 IFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIE 388
I + + V+ ++ + ++G VE A +++E
Sbjct: 300 IHAHI-VRADVDIAGAVGNALISMYAKSGAVEVAHRIVE 337
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 119/251 (47%), Gaps = 22/251 (8%)
Query: 2 PERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFD 61
P NV+++T+++ GY + G I A +F + ++VV+WT M+ G+ ++ I DA LF
Sbjct: 342 PSLNVIAFTSLLDGYFKIGDIDPARAIFDSLKHRDVVAWTAMIVGYAQNGLISDALVLFR 401
Query: 62 MM------PEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTT----MISGYVN 111
+M P +A V+ +D G+++ + +S + +I+ Y
Sbjct: 402 LMIREGPKPNNYTLAAVLSVISSL--ASLDHGKQLHAVAIRLEEVSSVSVGNALITMYSR 459
Query: 112 NNRIDVARKLF-EVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILG 170
+ I ARK+F + ++ ++WT+M++ Q G +A ELF+ M ++ + +G
Sbjct: 460 SGSIKDARKIFNHICSYRDTLTWTSMILSLAQHGLGNEAIELFEKMLRINLKPDHITYVG 519
Query: 171 L----GQNGEVQKARVVFDQMR-----EKDDATWSGMIKVYERKGYELEVIDLFTLMQKE 221
+ G V++ + F+ M+ E + ++ MI + R G E + M E
Sbjct: 520 VLSACTHVGLVEQGKSYFNLMKNVHNIEPTSSHYACMIDLLGRAGLLEEAYNFIRNMPIE 579
Query: 222 GVRVNFPSLIS 232
V + SL+S
Sbjct: 580 PDVVAWGSLLS 590
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 103/220 (46%), Gaps = 23/220 (10%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM----PEKNVVSWTVMLGGFIRDSRIDDA 56
+ R+VV+WTAM+ GY + G+I++A LF M P+ N + +L + +D
Sbjct: 372 LKHRDVVAWTAMIVGYAQNGLISDALVLFRLMIREGPKPNNYTLAAVLSVISSLASLDHG 431
Query: 57 RRLFDM---MPEKDVVAQTN-MVLGYCQDGRVDEGREIFDEM-PKKNVISWTTMISGY-- 109
++L + + E V+ N ++ Y + G + + R+IF+ + ++ ++WT+MI
Sbjct: 432 KQLHAVAIRLEEVSSVSVGNALITMYSRSGSIKDARKIFNHICSYRDTLTWTSMILSLAQ 491
Query: 110 --VNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAM-------PMKS 160
+ N I++ K+ + + + +++ +L T G ++ F M P S
Sbjct: 492 HGLGNEAIELFEKMLRINLKPDHITYVGVLSACTHVGLVEQGKSYFNLMKNVHNIEPTSS 551
Query: 161 VVASNSMILGLGQNGEVQKARVVFDQMR-EKDDATWSGMI 199
A MI LG+ G +++A M E D W ++
Sbjct: 552 HYA--CMIDLLGRAGLLEEAYNFIRNMPIEPDVVAWGSLL 589
>gi|356503240|ref|XP_003520419.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 801
Score = 463 bits (1191), Expect = e-127, Method: Compositional matrix adjust.
Identities = 243/618 (39%), Positives = 372/618 (60%), Gaps = 23/618 (3%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQM-------PEKNVVSWTVMLGGFIRDSRIDD 55
++VVSW+ M+R Y G++ EA L M E ++S T +L + D ++
Sbjct: 187 NKDVVSWSTMIRSYDRSGLLDEALDLLRDMHVMRVKPSEIGMISITHVLAE-LADLKLGK 245
Query: 56 ARRLFDMMPEK----DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVN 111
A + M K V T ++ Y + + R +FD + K ++ISWT MI+ Y++
Sbjct: 246 AMHAYVMRNGKCGKSGVPLCTALIDMYVKCENLAYARRVFDGLSKASIISWTAMIAAYIH 305
Query: 112 NNRIDVARKLFEVMPEK----NEVSWTAML-----MGYTQCGRIQDAWELFKAMPMKSVV 162
N ++ +LF M + NE++ +++ G + G++ A+ L + S+V
Sbjct: 306 CNNLNEGVRLFVKMLGEGMFPNEITMLSLVKECGTAGALELGKLLHAFTLRNGFTL-SLV 364
Query: 163 ASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEG 222
+ + I G+ G+V+ AR VFD + KD WS MI Y + E D+F M G
Sbjct: 365 LATAFIDMYGKCGDVRSARSVFDSFKSKDLMMWSAMISSYAQNNCIDEAFDIFVHMTGCG 424
Query: 223 VRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGK 282
+R N +++S+L +CA SL+ G+ +H+ + + D+ + + + MY CG++
Sbjct: 425 IRPNERTMVSLLMICAKAGSLEMGKWIHSYIDKQGIKGDMILKTSFVDMYANCGDIDTAH 484
Query: 283 LIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTG 342
+F +DI MWN++ISG+A +G GE +L++F EM + GV P+D+T +G L ACS++G
Sbjct: 485 RLFAEATDRDISMWNAMISGFAMHGHGEAALELFEEMEALGVTPNDITFIGALHACSHSG 544
Query: 343 KVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSL 402
++EG+ +F M ++ PK EHY CMVDLLGRAG +++A +LI++MP P+ ++GS
Sbjct: 545 LLQEGKRLFHKMVHEFGFTPKVEHYGCMVDLLGRAGLLDEAHELIKSMPMRPNIAVFGSF 604
Query: 403 LGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVI 462
L AC+ H + L E AAK+ L LEP +G +L+SNIYAS R+ DVA +R+ M+ ++
Sbjct: 605 LAACKLHKNIKLGEWAAKQFLSLEPHKSGYNVLMSNIYASANRWGDVAYIRRAMKDEGIV 664
Query: 463 KPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDE 522
K PG S IEV +H F D HP+ + M++++ L +AGY PD S VLH++D+
Sbjct: 665 KEPGVSSIEVNGLLHEFIMGD-REHPDAKKVYEMIDEMREKLEDAGYTPDVSCVLHNIDK 723
Query: 523 EEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRD 582
E+KV +L YHSEKLA+AYGL+ GVPIR++KNLRVC DCH+A KL+SK+ GREII+RD
Sbjct: 724 EKKVSALNYHSEKLAMAYGLISTAPGVPIRIVKNLRVCDDCHNATKLLSKIYGREIIVRD 783
Query: 583 ANRFHHFKDGLCSCRDYW 600
NRFHHFK+G CSC DYW
Sbjct: 784 RNRFHHFKEGSCSCCDYW 801
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 95/353 (26%), Positives = 175/353 (49%), Gaps = 12/353 (3%)
Query: 67 DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVM- 125
DV +++ Y + G + R +FD++ K+V+SW+TMI Y + +D A L M
Sbjct: 158 DVFVCNALIMMYSEVGSLALARLLFDKIENKDVVSWSTMIRSYDRSGLLDEALDLLRDMH 217
Query: 126 ------PEKNEVSWTAML--MGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGE- 176
E +S T +L + + G+ A+ + KS V + ++ + E
Sbjct: 218 VMRVKPSEIGMISITHVLAELADLKLGKAMHAYVMRNGKCGKSGVPLCTALIDMYVKCEN 277
Query: 177 VQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSV 236
+ AR VFD + + +W+ MI Y E + LF M EG+ N +++S++
Sbjct: 278 LAYARRVFDGLSKASIISWTAMIAAYIHCNNLNEGVRLFVKMLGEGMFPNEITMLSLVKE 337
Query: 237 CASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMW 296
C + +L+ G+ +HA +R F + + +A+ I MY KCG++ + +FD+F SKD++MW
Sbjct: 338 CGTAGALELGKLLHAFTLRNGFTLSLVLATAFIDMYGKCGDVRSARSVFDSFKSKDLMMW 397
Query: 297 NSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKS 356
+++IS YAQ +++ +F M G+ P++ T+V +L C+ G ++ G+ I S
Sbjct: 398 SAMISSYAQNNCIDEAFDIFVHMTGCGIRPNERTMVSLLMICAKAGSLEMGKWI-HSYID 456
Query: 357 KYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTH 409
K ++ VD+ G ++ A +L A + D +W +++ H
Sbjct: 457 KQGIKGDMILKTSFVDMYANCGDIDTAHRLF-AEATDRDISMWNAMISGFAMH 508
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 118/271 (43%), Gaps = 16/271 (5%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
+ + +++SWTAM+ Y+ + E LF +M + + + + +++ A L
Sbjct: 288 LSKASIISWTAMIAAYIHCNNLNEGVRLFVKMLGEGMFPNEITMLSLVKECGTAGALELG 347
Query: 61 DMMP--------EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
++ +V T + Y + G V R +FD K+++ W+ MIS Y N
Sbjct: 348 KLLHAFTLRNGFTLSLVLATAFIDMYGKCGDVRSARSVFDSFKSKDLMMWSAMISSYAQN 407
Query: 113 NRIDVARKLFEVMP----EKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSV----VAS 164
N ID A +F M NE + ++LM + G ++ + + + + +
Sbjct: 408 NCIDEAFDIFVHMTGCGIRPNERTMVSLLMICAKAGSLEMGKWIHSYIDKQGIKGDMILK 467
Query: 165 NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVR 224
S + G++ A +F + ++D + W+ MI + G+ ++LF M+ GV
Sbjct: 468 TSFVDMYANCGDIDTAHRLFAEATDRDISMWNAMISGFAMHGHGEAALELFEEMEALGVT 527
Query: 225 VNFPSLISVLSVCASLASLDHGRQVHAQLVR 255
N + I L C+ L G+++ ++V
Sbjct: 528 PNDITFIGALHACSHSGLLQEGKRLFHKMVH 558
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 81/160 (50%)
Query: 191 DDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVH 250
+ A S +I Y + + ++ M+ V+ + SVL C + S G++VH
Sbjct: 88 NAAIHSFLITSYIKNNCPADAAKIYAYMRGTDTEVDNFVIPSVLKACCLIPSFLLGQEVH 147
Query: 251 AQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGE 310
+V+ F DV+V + LI MY + G L +L+FD +KD+V W+++I Y + GL +
Sbjct: 148 GFVVKNGFHGDVFVCNALIMMYSEVGSLALARLLFDKIENKDVVSWSTMIRSYDRSGLLD 207
Query: 311 KSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREI 350
++L + +M V P ++ ++ + + +K G+ +
Sbjct: 208 EALDLLRDMHVMRVKPSEIGMISITHVLAELADLKLGKAM 247
>gi|15237442|ref|NP_199458.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170604|sp|Q9FHF9.1|PP419_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g46460, mitochondrial; Flags: Precursor
gi|10177583|dbj|BAB10814.1| unnamed protein product [Arabidopsis thaliana]
gi|332008005|gb|AED95388.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 697
Score = 463 bits (1191), Expect = e-127, Method: Compositional matrix adjust.
Identities = 243/640 (37%), Positives = 363/640 (56%), Gaps = 43/640 (6%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
+P +V +T M+ GY + +A LF +MP ++VVSW M+ G + ++ A +LF
Sbjct: 61 VPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLF 120
Query: 61 DMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARK 120
D MPE+ VV+ T MV G + G+VD+ +F +MP K+ +W +M+ GY+ ++D A K
Sbjct: 121 DEMPERSVVSWTAMVNGCFRSGKVDQAERLFYQMPVKDTAAWNSMVHGYLQFGKVDDALK 180
Query: 121 LFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAM----------PMKSVVA------- 163
LF+ MP KN +SWT M+ G Q R +A +LFK M P V+
Sbjct: 181 LFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPA 240
Query: 164 ----------------------SNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKV 201
S S+I + +R VFD+ + A W+ ++
Sbjct: 241 FHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSG 300
Query: 202 YERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVD 261
Y + + +F+ M + + N + S L+ C++L +LD G+++H V+ + D
Sbjct: 301 YSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETD 360
Query: 262 VYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFS 321
+V + L+ MY G + +F K IV WNSII G AQ+G G+ + +F +M
Sbjct: 361 AFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIR 420
Query: 322 SGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKY-LVEPKTEHYACMVDLLGRAGQV 380
PD++T G+LSACS+ G +++GR++F M S ++ K +HY CMVD+LGR G++
Sbjct: 421 LNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILGRCGKL 480
Query: 381 EDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIY 440
++A +LIE M +P+ ++W +LL ACR H +D E AA + L+ K++ Y+LLSNIY
Sbjct: 481 KEAEELIERMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKSSAAYVLLSNIY 540
Query: 441 ASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKI 500
AS GR+ +V++LR M+K ++K PG SW+ + K H F D P I LE +
Sbjct: 541 ASAGRWSNVSKLRVKMKKNGIMKKPGSSWVVIRGKKHEFFSGD---QPHCSRIYEKLEFL 597
Query: 501 GGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVC 560
L+E GY PD LHDV++E+K L YHSE+LA+A+GL+ EG + VMKNLRVC
Sbjct: 598 REKLKELGYAPDYRSALHDVEDEQKEEMLWYHSERLAIAFGLINTVEGSAVTVMKNLRVC 657
Query: 561 GDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
DCH+ IKLIS V+GREI+LRD RFHHFK+G CSC DYW
Sbjct: 658 EDCHTVIKLISGVVGREIVLRDPIRFHHFKNGTCSCGDYW 697
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 125/418 (29%), Positives = 215/418 (51%), Gaps = 35/418 (8%)
Query: 22 ITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQD 81
I EA +F Q+P +V +T M+ G+ R +R+ DA LFD MP +DVV+ +M+ G +
Sbjct: 51 IDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVEC 110
Query: 82 GRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYT 141
G ++ ++FDEMP+++V+SWT M++G + ++D A +LF MP K+ +W +M+ GY
Sbjct: 111 GDMNTAVKLFDEMPERSVVSWTAMVNGCFRSGKVDQAERLFYQMPVKDTAAWNSMVHGYL 170
Query: 142 QCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKV 201
Q G++ DA +LFK MP K+V++ +MI GL QN
Sbjct: 171 QFGKVDDALKLFKQMPGKNVISWTTMICGLDQN--------------------------- 203
Query: 202 YERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVD 261
ER G E +DLF M + ++ V++ CA+ + G QVH +++ F +
Sbjct: 204 -ERSG---EALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYE 259
Query: 262 VYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFS 321
YV++ LIT Y C + + +FD + + +W +++SGY+ E +L +F M
Sbjct: 260 EYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLR 319
Query: 322 SGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVE 381
+ ++P+ T L++CS G + G+E+ + K +E +V + +G V
Sbjct: 320 NSILPNQSTFASGLNSCSALGTLDWGKEM-HGVAVKLGLETDAFVGNSLVVMYSDSGNVN 378
Query: 382 DAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQL--EPKNAGPYILLS 437
DA+ + + F+ + W S++ C H + A V ++++L EP LLS
Sbjct: 379 DAVSVFIKI-FKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLS 435
>gi|449520177|ref|XP_004167110.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 463 bits (1191), Expect = e-127, Method: Compositional matrix adjust.
Identities = 236/592 (39%), Positives = 367/592 (61%), Gaps = 15/592 (2%)
Query: 22 ITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQD 81
+ A LF +MP+++ ++WT M+ G++R+ ++ AR +F+ M E A M+ GY
Sbjct: 208 MVSARKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFEAMVENLGAAWNAMISGYVHC 267
Query: 82 GRVDEGREIFDEMPKKNV----ISWTTMISGYVNNNRIDVARKLFEVMPEKNEVS----- 132
G E + +M + I++TT+IS N + +++ + KNE++
Sbjct: 268 GCFQEALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQVHAYIL-KNELNPNHSF 326
Query: 133 ----WTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMR 188
A++ Y + ++ +A ++F AMP+++++ N+++ G G +++A+ F++M
Sbjct: 327 CLSVSNALITLYCKNNKVDEARKIFYAMPVRNIITWNAILSGYVNAGRMEEAKSFFEEMP 386
Query: 189 EKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQ 248
K+ T + MI + G+ E + LF M+ +G + L+ C+ L +L++GRQ
Sbjct: 387 VKNLLTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGALTACSVLGALENGRQ 446
Query: 249 VHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGL 308
+HAQLV ++ + V + +I+MY KCG + + +F S D+V WNS+I+ Q+G
Sbjct: 447 LHAQLVHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMPSVDLVSWNSMIAALGQHGH 506
Query: 309 GEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYA 368
G K++++F +M GV PD +T + VL+ACS+ G V++GR F SM Y + P +HYA
Sbjct: 507 GVKAIELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGRHYFNSMLESYGITPCEDHYA 566
Query: 369 CMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPK 428
MVDL RAG A +I++MP +P A +W +LL CR H +DL AA++L +L P+
Sbjct: 567 RMVDLFCRAGMFSYARIVIDSMPSKPGAPVWEALLAGCRIHGNMDLGIEAAEQLFKLMPQ 626
Query: 429 NAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHP 488
N G Y+LLSNIYA GR+++VA++RK MR + V K P CSWIEVE KVH+F D V HP
Sbjct: 627 NDGTYVLLSNIYADVGRWNEVAKVRKLMRDQAVRKEPACSWIEVENKVHVFMVDDDV-HP 685
Query: 489 EHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEG 548
E + R LE++G +++ GY PD+ FVLHD++ E+K H+L HSEKLAV +G++KLP G
Sbjct: 686 EVLSVYRYLEQLGLEMKKLGYIPDTKFVLHDMEYEQKEHALSTHSEKLAVGFGIMKLPPG 745
Query: 549 VPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
+RV KN+R+CGDCH+A K +SKV REII+RD RFHHFK+G CSCRDYW
Sbjct: 746 ATVRVFKNIRICGDCHNAFKFMSKVARREIIVRDRKRFHHFKNGDCSCRDYW 797
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 114/453 (25%), Positives = 200/453 (44%), Gaps = 88/453 (19%)
Query: 43 MLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMP--KKNVI 100
+L + + S + AR+LF+ +P D +A+T ++ YC G ++ GREIF+ P ++ +
Sbjct: 54 LLEMYCKSSNLVYARQLFEEIPNPDAIARTTLITAYCALGNLELGREIFNGTPLYMRDSV 113
Query: 101 SWTTMISGYVNNNRIDVARKLFEVMPEKN----EVSWTAMLMGYT-------QCGRIQ-- 147
+ MI+GY +N A +LF M + + ++T++L QCG++
Sbjct: 114 FYNAMITGYAHNGDGHSALELFRAMRRDDFRPDDFTFTSVLSALVLFVGNEQQCGQMHCA 173
Query: 148 ------------------------------------DAWELFKAMPMKSVVASNSMILGL 171
A +LF MP + + +MI G
Sbjct: 174 VVKTGMGCVSSSVLNALLSVYVKRASELGISCSAMVSARKLFDEMPKRDELTWTTMITGY 233
Query: 172 GQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLI 231
+N ++ AR VF+ M E A W+ MI Y G E + L M+ G++ + +
Sbjct: 234 VRNDDLNGAREVFEAMVENLGAAWNAMISGYVHCGCFQEALTLCRKMRFLGIQFDDITYT 293
Query: 232 SVLSVCASLASLDHGRQVHAQLVRCQFDVD----VYVASVLITMYIKCGELVKGKLIFDN 287
+++S CA++ S G+QVHA +++ + + + + V++ LIT+Y K ++ + + IF
Sbjct: 294 TIISACANVGSFQMGKQVHAYILKNELNPNHSFCLSVSNALITLYCKNNKVDEARKIFYA 353
Query: 288 FASKDIVMWNSIISGY-------------------------------AQYGLGEKSLKVF 316
++I+ WN+I+SGY AQ G G++ LK+F
Sbjct: 354 MPVRNIITWNAILSGYVNAGRMEEAKSFFEEMPVKNLLTLTVMISGLAQNGFGDEGLKLF 413
Query: 317 HEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGR 376
+M G P D G L+ACS G ++ GR++ + E M+ + +
Sbjct: 414 KQMRLDGFEPCDFAFAGALTACSVLGALENGRQLHAQL-VHLGYESSLSVGNAMISMYAK 472
Query: 377 AGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTH 409
G VE A + MP D + W S++ A H
Sbjct: 473 CGVVEAAESVFVTMP-SVDLVSWNSMIAALGQH 504
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 102/447 (22%), Positives = 192/447 (42%), Gaps = 97/447 (21%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRL- 59
MP+R+ ++WT M+ GYV + A +F M E +W M+ G++ +A L
Sbjct: 218 MPKRDELTWTTMITGYVRNDDLNGAREVFEAMVENLGAAWNAMISGYVHCGCFQEALTLC 277
Query: 60 ---------FDMMPEKDVVA---------------------------------QTNMVLG 77
FD + +++ ++
Sbjct: 278 RKMRFLGIQFDDITYTTIISACANVGSFQMGKQVHAYILKNELNPNHSFCLSVSNALITL 337
Query: 78 YCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAML 137
YC++ +VDE R+IF MP +N+I+W ++SGYVN R++ A+ FE MP KN ++ T M+
Sbjct: 338 YCKNNKVDEARKIFYAMPVRNIITWNAILSGYVNAGRMEEAKSFFEEMPVKNLLTLTVMI 397
Query: 138 MGYTQCGRIQDAWELFKAMPM--------------------------------------- 158
G Q G + +LFK M +
Sbjct: 398 SGLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGALTACSVLGALENGRQLHAQLVHLGYE 457
Query: 159 KSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLM 218
S+ N+MI + G V+ A VF M D +W+ MI + G+ ++ I+LF M
Sbjct: 458 SSLSVGNAMISMYAKCGVVEAAESVFVTMPSVDLVSWNSMIAALGQHGHGVKAIELFDQM 517
Query: 219 QKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVR------CQFDVDVYVASVLITMY 272
KEGV + + ++VL+ C+ ++ GR ++ C+ D Y + ++ ++
Sbjct: 518 LKEGVFPDRITFLTVLTACSHAGLVEKGRHYFNSMLESYGITPCE---DHY--ARMVDLF 572
Query: 273 IKCGELVKGKLIFDNFASK-DIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMP-DDVT 330
+ G +++ D+ SK +W ++++G +G + ++ ++F +MP +D T
Sbjct: 573 CRAGMFSYARIVIDSMPSKPGAPVWEALLAGCRIHGNMDLGIEAAEQLFK--LMPQNDGT 630
Query: 331 LVGVLSACSYTGKVKEGREIFESMKSK 357
V + + + G+ E ++ + M+ +
Sbjct: 631 YVLLSNIYADVGRWNEVAKVRKLMRDQ 657
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 51/130 (39%), Gaps = 33/130 (25%)
Query: 241 ASLDHGRQVHAQLVRCQF-------------------------------DVDVYVASVLI 269
AS R VHA ++ F + D + LI
Sbjct: 27 ASFSLARAVHAHMIASGFKPRGHFLNRLLEMYCKSSNLVYARQLFEEIPNPDAIARTTLI 86
Query: 270 TMYIKCGELVKGKLIFDN--FASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPD 327
T Y G L G+ IF+ +D V +N++I+GYA G G +L++F M PD
Sbjct: 87 TAYCALGNLELGREIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELFRAMRRDDFRPD 146
Query: 328 DVTLVGVLSA 337
D T VLSA
Sbjct: 147 DFTFTSVLSA 156
>gi|147857367|emb|CAN80796.1| hypothetical protein VITISV_034275 [Vitis vinifera]
Length = 771
Score = 462 bits (1190), Expect = e-127, Method: Compositional matrix adjust.
Identities = 248/648 (38%), Positives = 385/648 (59%), Gaps = 52/648 (8%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF-- 60
+R+V A++ Y E + A +F +M E++VVSW+ M+ R+ D A L
Sbjct: 126 DRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWSTMIRSLSRNKEFDMALELIRE 185
Query: 61 -----------DMMPEKDVVAQT-NMVLG---------------------------YCQD 81
M+ ++ A T NM +G Y +
Sbjct: 186 MNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNEHMGVPTTTALLDMYAKC 245
Query: 82 GRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKN----EVSWTAML 137
G + R++F+ + +K V+SWT MI+G + +NR++ KLF M E+N E++ +++
Sbjct: 246 GHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEGTKLFIRMQEENIFPNEITMLSLI 305
Query: 138 M--GYT---QCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDD 192
+ G+T Q G+ A+ L + S+ + +++ G+ +++ AR +FD + +D
Sbjct: 306 VECGFTGALQLGKQLHAYILRNGFSV-SLALATALVDMYGKCSDIRNARALFDSTQNRDV 364
Query: 193 ATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQ 252
W+ M+ Y + + +LF M+ GVR +++S+LS+CA +LD G+ VH+
Sbjct: 365 MIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSY 424
Query: 253 LVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKS 312
+ + + +VD + + L+ MY KCG++ +F S+DI MWN+II+G+A +G GE++
Sbjct: 425 IDKERVEVDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEA 484
Query: 313 LKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVD 372
L +F EM GV P+D+T +G+L ACS+ G V EG+++FE M + + P+ EHY CMVD
Sbjct: 485 LDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVD 544
Query: 373 LLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGP 432
LLGRAG +++A ++I++MP +P+ I+WG+L+ ACR H L E+AA +LL++EP+N G
Sbjct: 545 LLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAACRLHKNPQLGELAATQLLEIEPENCGY 604
Query: 433 YILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPM 492
+L+SNIYA+ R+ D A +RK M+ + K PG S IEV VH F D SHP+
Sbjct: 605 NVLMSNIYAAANRWSDAAGVRKTMKTVGMKKEPGHSVIEVNGTVHEFLMGD-QSHPQIRR 663
Query: 493 IMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIR 552
I ML ++ L EAGY PD+S VL ++DEEEK +L YHSEKLA+A+GL+ PIR
Sbjct: 664 INEMLAEMRRKLNEAGYVPDTSTVLLNIDEEEKETALTYHSEKLAMAFGLISTAPSTPIR 723
Query: 553 VMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
++KNLRVC DCH+A KL+SK+ GR II+RD NRFHHF++G CSC DYW
Sbjct: 724 IVKNLRVCNDCHAATKLLSKIYGRVIIVRDRNRFHHFREGYCSCGDYW 771
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 105/390 (26%), Positives = 194/390 (49%), Gaps = 36/390 (9%)
Query: 38 VSWTVM---LGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEM 94
VSWT + + GF+ +D +DV ++L Y + V+ R +FD+M
Sbjct: 107 VSWTQLGKEIHGFVLKKGLD-----------RDVFVGNALMLMYGECACVEYARLVFDKM 155
Query: 95 PKKNVISWTTMISGYVNNNRIDVARKLFEVMP----EKNEVSWTAMLMGYTQCGRIQDAW 150
+++V+SW+TMI N D+A +L M +EV+ +M+ + ++
Sbjct: 156 MERDVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMR--- 212
Query: 151 ELFKAMPMKSVVASNSMILGL----------GQNGEVQKARVVFDQMREKDDATWSGMIK 200
+ KAM + SN+ +G+ + G + AR +F+ + +K +W+ MI
Sbjct: 213 -MGKAMHAYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIA 271
Query: 201 VYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDV 260
R E LF MQ+E + N +++S++ C +L G+Q+HA ++R F V
Sbjct: 272 GCIRSNRLEEGTKLFIRMQEENIFPNEITMLSLIVECGFTGALQLGKQLHAYILRNGFSV 331
Query: 261 DVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMF 320
+ +A+ L+ MY KC ++ + +FD+ ++D+++W +++S YAQ +++ +F +M
Sbjct: 332 SLALATALVDMYGKCSDIRNARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMR 391
Query: 321 SSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQV 380
+SGV P VT+V +LS C+ G + G+ + S K VE +VD+ + G +
Sbjct: 392 TSGVRPTKVTIVSLLSLCAVAGALDLGKWV-HSYIDKERVEVDCILNTALVDMYAKCGDI 450
Query: 381 EDAMKL-IEAMPFEPDAIIWGSLLGACRTH 409
A +L IEA+ D +W +++ H
Sbjct: 451 NAAGRLFIEAI--SRDICMWNAIITGFAMH 478
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 149/288 (51%), Gaps = 20/288 (6%)
Query: 124 VMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVV 183
V+ +VSWT Q G+ + L K + + V N+++L G+ V+ AR+V
Sbjct: 100 VLKACGQVSWT-------QLGKEIHGFVLKKGLD-RDVFVGNALMLMYGECACVEYARLV 151
Query: 184 FDQMREKDDATWSGMIKVYERK---GYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASL 240
FD+M E+D +WS MI+ R LE+I MQ VR + +++S++++ A
Sbjct: 152 FDKMMERDVVSWSTMIRSLSRNKEFDMALELIREMNFMQ---VRPSEVAMVSMVNLFADT 208
Query: 241 ASLDHGRQVHAQLVRCQFD--VDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNS 298
A++ G+ +HA ++R + + V + L+ MY KCG L + +F+ K +V W +
Sbjct: 209 ANMRMGKAMHAYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTA 268
Query: 299 IISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFES-MKSK 357
+I+G + E+ K+F M + P+++T++ ++ C +TG ++ G+++ +++
Sbjct: 269 MIAGCIRSNRLEEGTKLFIRMQEENIFPNEITMLSLIVECGFTGALQLGKQLHAYILRNG 328
Query: 358 YLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
+ V +VD+ G+ + +A L ++ D +IW ++L A
Sbjct: 329 FSVSLALA--TALVDMYGKCSDIRNARALFDSTQ-NRDVMIWTAMLSA 373
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 102/205 (49%), Gaps = 11/205 (5%)
Query: 232 SVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASK 291
SVL C ++ G+++H +++ D DV+V + L+ MY +C + +L+FD +
Sbjct: 99 SVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMER 158
Query: 292 DIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGRE-- 349
D+V W+++I ++ + +L++ EM V P +V +V +++ + T ++ G+
Sbjct: 159 DVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMH 218
Query: 350 --IFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACR 407
+ + ++++ P T ++D+ + G + A +L + + + W +++ C
Sbjct: 219 AYVIRNSNNEHMGVPTT---TALLDMYAKCGHLGLARQLFNGLT-QKTVVSWTAMIAGCI 274
Query: 408 THMKLDLAEVAAKKLLQLEPKNAGP 432
+L E K ++++ +N P
Sbjct: 275 RSNRL---EEGTKLFIRMQEENIFP 296
>gi|449527343|ref|XP_004170671.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g24000, mitochondrial-like [Cucumis sativus]
Length = 677
Score = 462 bits (1190), Expect = e-127, Method: Compositional matrix adjust.
Identities = 231/545 (42%), Positives = 350/545 (64%), Gaps = 13/545 (2%)
Query: 65 EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEV 124
E D+V ++ Y + G ++E +++FD+MP K+++SWT +ISGY + + A LF
Sbjct: 137 EDDLVLLNFILNMYAKCGSLEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPK 196
Query: 125 MP----EKNEVSWTAMLMGY-----TQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNG 175
M + NE + +++L GR A+ L M V S S++ +
Sbjct: 197 MLHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYDMNVHVGS-SLLDMYARWA 255
Query: 176 EVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLS 235
+++A+V+F+ + K+ +W+ +I + RKG V+ LF M ++G + SVL+
Sbjct: 256 HMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFXQMLRQGFEPTHFTYSSVLA 315
Query: 236 VCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVM 295
CAS SL+ G+ VHA +++ Y+ + LI MY K G + K +F +DIV
Sbjct: 316 -CASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVS 374
Query: 296 WNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMK 355
WNSIISGYAQ+GLG ++L++F +M + V P+++T + VL+ACS++G + EG+ FE MK
Sbjct: 375 WNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMK 434
Query: 356 SKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLA 415
K+ +E + H+ +VDLLGRAG++ +A K IE MP +P A +WG+LLGACR H +DL
Sbjct: 435 -KHKIEAQVAHHVTVVDLLGRAGRLNEANKFIEEMPIKPTAAVWGALLGACRMHKNMDLG 493
Query: 416 EVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKK 475
AA+++ +L+P ++GP++LLSNIYAS GR D A++RK M++ V K P CSW+E+E +
Sbjct: 494 VYAAEQIFELDPHDSGPHVLLSNIYASAGRLSDAAKVRKMMKESGVKKEPACSWVEIENE 553
Query: 476 VHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEK 535
VH+F D SHP I RM EKI G ++E GY PD+S VL ++++++ L+YHSEK
Sbjct: 554 VHVFVAND-DSHPMREEIQRMWEKISGKIKEIGYVPDTSHVLFFMNQQDRELKLQYHSEK 612
Query: 536 LAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCS 595
LA+A+ ++K P G+ IR+ KN+R+CGDCHSA K S+V+GREII+RD NRFHHF G+CS
Sbjct: 613 LALAFAVLKTPPGLTIRIKKNIRICGDCHSAFKFASRVLGREIIVRDTNRFHHFLHGMCS 672
Query: 596 CRDYW 600
CRDYW
Sbjct: 673 CRDYW 677
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/322 (21%), Positives = 143/322 (44%), Gaps = 24/322 (7%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDA---- 56
MP +++VSWT ++ GY + G +EA LF +M L ++ S +
Sbjct: 166 MPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHG 225
Query: 57 RRL--------FDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISG 108
R+L +DM +V ++++ Y + + E + IF+ + KNV+SW +I+G
Sbjct: 226 RQLHAFSLKYGYDM----NVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAG 281
Query: 109 YVNNNRIDVARKLFEVMP----EKNEVSWTAMLMGYTQCGRIQDAW---ELFKAMPMKSV 161
+ + +LF M E +++++L + Q W + K+
Sbjct: 282 HARKGEGEHVMRLFXQMLRQGFEPTHFTYSSVLACASSGSLEQGKWVHAHVIKSGGQPIA 341
Query: 162 VASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKE 221
N++I ++G ++ A+ VF ++ ++D +W+ +I Y + G E + LF M K
Sbjct: 342 YIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKA 401
Query: 222 GVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKG 281
V+ N + +SVL+ C+ LD G+ + + + + V ++ + + G L +
Sbjct: 402 KVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKHKIEAQVAHHVTVVDLLGRAGRLNEA 461
Query: 282 KLIFDNFASKDI-VMWNSIISG 302
+ K +W +++
Sbjct: 462 NKFIEEMPIKPTAAVWGALLGA 483
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 130/298 (43%), Gaps = 58/298 (19%)
Query: 209 LEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVL 268
L V+DL E R + + L+ C L L GR +HA + F+ D+ + + +
Sbjct: 90 LYVLDLINCGSLEPERTLYSKM---LNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFI 146
Query: 269 ITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDD 328
+ MY KCG L + + +FD +KD+V W +ISGY+Q G ++L +F +M G P++
Sbjct: 147 LNMYAKCGSLEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNE 206
Query: 329 VTLVGVLSACSYTG------------------------------------KVKEGREIFE 352
TL +L A S TG ++E + IF
Sbjct: 207 FTLSSLLKA-SGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFN 265
Query: 353 SMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAM---PFEPDAIIWGSLLGACRTH 409
S+ +K +V + ++ R G+ E M+L M FEP + S+L AC +
Sbjct: 266 SLAAKNVVS-----WNALIAGHARKGEGEHVMRLFXQMLRQGFEPTHFTYSSVL-ACASS 319
Query: 410 MKLDLAEVAAKKLLQLEPKNAGPYI-----LLSNIYASQGRFHDVAELRKNMRKRNVI 462
L+ + ++ K+ G I L ++YA G D ++ + + K++++
Sbjct: 320 GSLEQGKWVHAHVI----KSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIV 373
>gi|297821407|ref|XP_002878586.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324425|gb|EFH54845.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 786
Score = 462 bits (1189), Expect = e-127, Method: Compositional matrix adjust.
Identities = 240/608 (39%), Positives = 372/608 (61%), Gaps = 13/608 (2%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMP 64
NV +++ Y + G A +F +M K++ SW M+ ++ ++D A F+ M
Sbjct: 180 NVSVSNSLLNMYAKCGDPMMAKVVFDRMVVKDISSWNAMIALHMQVGQMDLAMAQFEQMA 239
Query: 65 EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVIS-----WTTMISGYVNNNRIDVAR 119
E+D+V +M+ GY Q G ++F +M + +++S +++S N ++ +
Sbjct: 240 ERDIVTWNSMISGYNQRGYDLRALDMFSKMLRDSMLSPDRFTLASVLSACANLEKLCIGE 299
Query: 120 KLF-EVMPEKNEVS---WTAMLMGYTQCGRIQDAWELFKAMPMKS--VVASNSMILGLGQ 173
++ ++ ++S A++ Y++CG ++ A L + K + +++ G +
Sbjct: 300 QIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIK 359
Query: 174 NGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISV 233
G++ +A+ +FD ++++D W+ MI YE+ G E I+LF M E R N +L ++
Sbjct: 360 LGDMNEAKNIFDSLKDRDVVAWTAMIVGYEQHGLYGEAINLFRSMVGEEQRPNSYTLAAM 419
Query: 234 LSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNF-ASKD 292
LSV +SLASL HG+Q+H V+ V V++ LITMY K G + FD +D
Sbjct: 420 LSVASSLASLGHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGSITSASRAFDLIRCERD 479
Query: 293 IVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFE 352
V W S+I AQ+G E++L++F M G+ PD +T VGV SAC++ G V +GR+ F+
Sbjct: 480 TVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFD 539
Query: 353 SMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKL 412
MK + P HYACMVDL GRAG +++A + IE MP EPD + WGSLL ACR + +
Sbjct: 540 MMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVYKNI 599
Query: 413 DLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEV 472
DL +VAA++LL LEP+N+G Y L+N+Y++ G++ + A++RK+M+ V K G SWIEV
Sbjct: 600 DLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEV 659
Query: 473 EKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYH 532
+ KVH F D + HP+ I ++KI +++ GY PD++ VLHD++EE K LR+H
Sbjct: 660 KHKVHAFGVEDGI-HPQKNEIYITMKKIWDEIKKMGYVPDTASVLHDLEEEVKEQILRHH 718
Query: 533 SEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDG 592
SEKLA+A+GL+ P+ +R+MKNLRVC DCH+AIK ISK++GREII+RD RFHHFKDG
Sbjct: 719 SEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGREIIVRDTTRFHHFKDG 778
Query: 593 LCSCRDYW 600
CSCRDYW
Sbjct: 779 FCSCRDYW 786
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 115/437 (26%), Positives = 209/437 (47%), Gaps = 45/437 (10%)
Query: 16 YVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMV 75
Y + G A LF +MP + SW +L + + +D + FD +P++D V+ T M+
Sbjct: 59 YSKTGYALHARKLFDEMPLRTAFSWNTVLSAYAKRGDMDSSCEFFDRLPQRDSVSWTTMI 118
Query: 76 LGYCQDGRVDEGREIFDEMPKKNV----ISWTTMISGYVNNNRIDVARKLFEVMPE---K 128
+GY G+ + I EM ++ + + T +++ ++ +K+ + + +
Sbjct: 119 VGYKNIGQYHKAIRIMGEMMREGIEPSQFTLTNVLASVAATRCLETGKKVHSFIVKLGLR 178
Query: 129 NEVSWTAMLMG-YTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQM 187
VS + L+ Y +CG A +F M +K + + N+MI Q G++ A F+QM
Sbjct: 179 GNVSVSNSLLNMYAKCGDPMMAKVVFDRMVVKDISSWNAMIALHMQVGQMDLAMAQFEQM 238
Query: 188 REKDDATWSGMIKVYERKGYELEVIDLFTLMQKEG-VRVNFPSLISVLSVCASLASLDHG 246
E+D TW+ MI Y ++GY+L +D+F+ M ++ + + +L SVLS CA+L L G
Sbjct: 239 AERDIVTWNSMISGYNQRGYDLRALDMFSKMLRDSMLSPDRFTLASVLSACANLEKLCIG 298
Query: 247 RQVHAQLVRCQFDVDVYVASVLITMYIKC------------------------------- 275
Q+H+ +V FD+ V + LI+MY +C
Sbjct: 299 EQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYI 358
Query: 276 --GELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVG 333
G++ + K IFD+ +D+V W ++I GY Q+GL +++ +F M P+ TL
Sbjct: 359 KLGDMNEAKNIFDSLKDRDVVAWTAMIVGYEQHGLYGEAINLFRSMVGEEQRPNSYTLAA 418
Query: 334 VLSACSYTGKVKEGREIFES-MKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPF 392
+LS S + G++I S +KS + + ++ + +AG + A + + +
Sbjct: 419 MLSVASSLASLGHGKQIHGSAVKSGEIYSVSVSN--ALITMYAKAGSITSASRAFDLIRC 476
Query: 393 EPDAIIWGSLLGACRTH 409
E D + W S++ A H
Sbjct: 477 ERDTVSWTSMIIALAQH 493
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 154/323 (47%), Gaps = 38/323 (11%)
Query: 103 TTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMG-----YTQCGRIQDAWELFKAMP 157
T ++ VN + +L K+ + ++ LM Y++ G A +LF MP
Sbjct: 17 TNLLQKSVNKSNGRFTAQLVHCRVIKSGLVFSVYLMNNLMNVYSKTGYALHARKLFDEMP 76
Query: 158 MKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTL 217
+++ + N+++ + G++ + FD++ ++D +W+ MI Y+ G + I +
Sbjct: 77 LRTAFSWNTVLSAYAKRGDMDSSCEFFDRLPQRDSVSWTTMIVGYKNIGQYHKAIRIMGE 136
Query: 218 MQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGE 277
M +EG+ + +L +VL+ A+ L+ G++VH+ +V+ +V V++ L+ MY KCG+
Sbjct: 137 MMREGIEPSQFTLTNVLASVAATRCLETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGD 196
Query: 278 LVKGKLIFD-------------------------------NFASKDIVMWNSIISGYAQY 306
+ K++FD A +DIV WNS+ISGY Q
Sbjct: 197 PMMAKVVFDRMVVKDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGYNQR 256
Query: 307 GLGEKSLKVFHEMFSSGVM-PDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTE 365
G ++L +F +M ++ PD TL VLSAC+ K+ G +I + + +
Sbjct: 257 GYDLRALDMFSKMLRDSMLSPDRFTLASVLSACANLEKLCIGEQIHSHIVTTGF-DISGI 315
Query: 366 HYACMVDLLGRAGQVEDAMKLIE 388
++ + R G VE A +LIE
Sbjct: 316 VLNALISMYSRCGGVETARRLIE 338
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 86/168 (51%), Gaps = 15/168 (8%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV----VSWTVMLGGFIRDSRIDDARR 58
ER+ VSWT+M+ + G EA LF M + + +++ + ++ R+
Sbjct: 477 ERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQ 536
Query: 59 LFDMMPEKDVVAQT-----NMVLGYCQDGRVDEGREIFDEMP-KKNVISWTTMISGYVNN 112
FDMM + D + T MV + + G + E +E ++MP + +V++W +++S
Sbjct: 537 YFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVY 596
Query: 113 NRIDV----ARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAM 156
ID+ A +L + PE N +++A+ Y+ CG+ ++A ++ K+M
Sbjct: 597 KNIDLGKVAAERLLLLEPE-NSGAYSALANLYSACGKWEEAAKIRKSM 643
>gi|449470118|ref|XP_004152765.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 462 bits (1189), Expect = e-127, Method: Compositional matrix adjust.
Identities = 236/592 (39%), Positives = 366/592 (61%), Gaps = 15/592 (2%)
Query: 22 ITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQD 81
+ A LF +MP+++ ++WT M+ G++R+ ++ AR +F+ M E A M+ GY
Sbjct: 208 MVSARKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFEAMVENLGAAWNAMISGYVHC 267
Query: 82 GRVDEGREIFDEMPKKNV----ISWTTMISGYVNNNRIDVARKLFEVMPEKNEVS----- 132
G E + +M + I++TT+IS N + +++ + KNE++
Sbjct: 268 GCFQEALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQMHAYIL-KNELNPNHSF 326
Query: 133 ----WTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMR 188
A++ Y + ++ +A ++F AMP+++++ N+++ G G +++A+ F++M
Sbjct: 327 CLSVSNALITLYCKNNKVDEARKIFYAMPVRNIITWNAILSGYVNAGRMEEAKSFFEEMP 386
Query: 189 EKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQ 248
K+ T + MI + G+ E + LF M+ +G + L+ C+ L +L++GRQ
Sbjct: 387 VKNLLTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGALTACSVLGALENGRQ 446
Query: 249 VHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGL 308
+HAQLV ++ + V + +I+MY KCG + + +F S D+V WNS+I+ Q+G
Sbjct: 447 LHAQLVHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMPSVDLVSWNSMIAALGQHGH 506
Query: 309 GEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYA 368
G K++++F +M GV PD +T + VL+ACS+ G V++GR F SM Y + P +HYA
Sbjct: 507 GVKAIELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGRHYFNSMLESYGITPCEDHYA 566
Query: 369 CMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPK 428
MVDL RAG A +I++MP +P A +W +LL CR H +DL AA++L +L P+
Sbjct: 567 RMVDLFCRAGMFSYARIVIDSMPSKPGAPVWEALLAGCRIHGNMDLGIEAAEQLFKLMPQ 626
Query: 429 NAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHP 488
N G Y+LLSNIYA GR++DVA++RK MR + V K P CSWIEVE KVH+F D V HP
Sbjct: 627 NDGTYVLLSNIYADVGRWNDVAKVRKLMRDQAVRKEPACSWIEVENKVHVFMVDDDV-HP 685
Query: 489 EHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEG 548
E + R LE++G +++ GY PD+ FVLHD++ E+K H+L HSEKLAV +G++KLP
Sbjct: 686 EVLSVYRYLEQLGLEMKKLGYIPDTKFVLHDMEYEQKEHALSTHSEKLAVGFGIMKLPPD 745
Query: 549 VPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
+RV KN+R+CGDCH+A K +SKV REII+RD RFHHFK+G CSCRDYW
Sbjct: 746 ATVRVFKNIRICGDCHNAFKFMSKVARREIIVRDRKRFHHFKNGDCSCRDYW 797
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 113/453 (24%), Positives = 200/453 (44%), Gaps = 88/453 (19%)
Query: 43 MLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMP--KKNVI 100
+L + + S + AR+LF+ +P D +A+T ++ YC G ++ GREIF+ P ++ +
Sbjct: 54 LLEMYCKSSNVVYARQLFEEIPNPDAIARTTLITAYCALGNLELGREIFNGTPLYMRDSV 113
Query: 101 SWTTMISGYVNNNRIDVARKLFEVMPEKN----EVSWTAMLMGYT-------QCGRIQ-- 147
+ MI+GY +N A +LF M + + ++T++L QCG++
Sbjct: 114 FYNAMITGYAHNGDGHSALELFRAMRRDDFRPDDFTFTSVLSALVLFVGNEQQCGQMHCA 173
Query: 148 ------------------------------------DAWELFKAMPMKSVVASNSMILGL 171
A +LF MP + + +MI G
Sbjct: 174 VVKTGMGCVSSSVLNALLSVYVKRASELGIPCSAMVSARKLFDEMPKRDELTWTTMITGY 233
Query: 172 GQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLI 231
+N ++ AR VF+ M E A W+ MI Y G E + L M+ G++ + +
Sbjct: 234 VRNDDLNGAREVFEAMVENLGAAWNAMISGYVHCGCFQEALTLCRKMRFLGIQFDDITYT 293
Query: 232 SVLSVCASLASLDHGRQVHAQLVRCQFDVD----VYVASVLITMYIKCGELVKGKLIFDN 287
+++S CA++ S G+Q+HA +++ + + + + V++ LIT+Y K ++ + + IF
Sbjct: 294 TIISACANVGSFQMGKQMHAYILKNELNPNHSFCLSVSNALITLYCKNNKVDEARKIFYA 353
Query: 288 FASKDIVMWNSIISGY-------------------------------AQYGLGEKSLKVF 316
++I+ WN+I+SGY AQ G G++ LK+F
Sbjct: 354 MPVRNIITWNAILSGYVNAGRMEEAKSFFEEMPVKNLLTLTVMISGLAQNGFGDEGLKLF 413
Query: 317 HEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGR 376
+M G P D G L+ACS G ++ GR++ + E M+ + +
Sbjct: 414 KQMRLDGFEPCDFAFAGALTACSVLGALENGRQLHAQL-VHLGYESSLSVGNAMISMYAK 472
Query: 377 AGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTH 409
G VE A + MP D + W S++ A H
Sbjct: 473 CGVVEAAESVFVTMP-SVDLVSWNSMIAALGQH 504
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 96/417 (23%), Positives = 177/417 (42%), Gaps = 96/417 (23%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRL- 59
MP+R+ ++WT M+ GYV + A +F M E +W M+ G++ +A L
Sbjct: 218 MPKRDELTWTTMITGYVRNDDLNGAREVFEAMVENLGAAWNAMISGYVHCGCFQEALTLC 277
Query: 60 ---------FDMMPEKDVVA---------------------------------QTNMVLG 77
FD + +++ ++
Sbjct: 278 RKMRFLGIQFDDITYTTIISACANVGSFQMGKQMHAYILKNELNPNHSFCLSVSNALITL 337
Query: 78 YCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAML 137
YC++ +VDE R+IF MP +N+I+W ++SGYVN R++ A+ FE MP KN ++ T M+
Sbjct: 338 YCKNNKVDEARKIFYAMPVRNIITWNAILSGYVNAGRMEEAKSFFEEMPVKNLLTLTVMI 397
Query: 138 MGYTQCGRIQDAWELFKAMPM--------------------------------------- 158
G Q G + +LFK M +
Sbjct: 398 SGLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGALTACSVLGALENGRQLHAQLVHLGYE 457
Query: 159 KSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLM 218
S+ N+MI + G V+ A VF M D +W+ MI + G+ ++ I+LF M
Sbjct: 458 SSLSVGNAMISMYAKCGVVEAAESVFVTMPSVDLVSWNSMIAALGQHGHGVKAIELFDQM 517
Query: 219 QKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVR------CQFDVDVYVASVLITMY 272
KEGV + + ++VL+ C+ ++ GR ++ C+ D Y + ++ ++
Sbjct: 518 LKEGVFPDRITFLTVLTACSHAGLVEKGRHYFNSMLESYGITPCE---DHY--ARMVDLF 572
Query: 273 IKCGELVKGKLIFDNFASK-DIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDD 328
+ G +++ D+ SK +W ++++G +G + ++ ++F +MP +
Sbjct: 573 CRAGMFSYARIVIDSMPSKPGAPVWEALLAGCRIHGNMDLGIEAAEQLFK--LMPQN 627
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 51/130 (39%), Gaps = 33/130 (25%)
Query: 241 ASLDHGRQVHAQLVRCQF-------------------------------DVDVYVASVLI 269
AS R VHA ++ F + D + LI
Sbjct: 27 ASFSLARAVHAHMIASGFKPRGHFLNRLLEMYCKSSNVVYARQLFEEIPNPDAIARTTLI 86
Query: 270 TMYIKCGELVKGKLIFDN--FASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPD 327
T Y G L G+ IF+ +D V +N++I+GYA G G +L++F M PD
Sbjct: 87 TAYCALGNLELGREIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELFRAMRRDDFRPD 146
Query: 328 DVTLVGVLSA 337
D T VLSA
Sbjct: 147 DFTFTSVLSA 156
>gi|147856457|emb|CAN80769.1| hypothetical protein VITISV_013866 [Vitis vinifera]
Length = 761
Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust.
Identities = 255/608 (41%), Positives = 369/608 (60%), Gaps = 16/608 (2%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDM 62
ER V W AMV GY + +A LF MPE+NV++WT M+ G+ + ++ ARR FD
Sbjct: 160 ERKVADWNAMVSGYWKWESEGQAQWLFDVMPERNVITWTAMVTGYAKVKDLEAARRYFDC 219
Query: 63 MPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNV----ISWTTMISGYVNNNRIDVA 118
MPE+ VV+ M+ GY Q+G +E +FDEM + +W T+IS + +A
Sbjct: 220 MPERSVVSWNAMLSGYAQNGLAEEVLRLFDEMVNAGIEPDETTWVTVISACSSRGDPCLA 279
Query: 119 RKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAM-PMKSVVASNSMILGLGQ 173
L + +K N TA+L Y +CG I A +F + ++ V N+MI +
Sbjct: 280 ASLVRTLHQKQIQLNCFVRTALLDMYAKCGSIGAARRIFDELGAYRNSVTWNAMISAYTR 339
Query: 174 NGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFT-LMQKEGVRVNFPSLIS 232
G + AR +F+ M ++ TW+ MI Y + G I+LF ++ + + + +++S
Sbjct: 340 VGNLDSARELFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVS 399
Query: 233 VLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKD 292
V+S C L +L+ G V L Q + + + +I MY +CG + K +F A++D
Sbjct: 400 VISACGHLGALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATRD 459
Query: 293 IVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFE 352
+V +N++ISG+A +G G +++ + M G+ PD VT +GVL+ACS+ G ++EGR++FE
Sbjct: 460 VVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEGRKVFE 519
Query: 353 SMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKL 412
S+K +P +HYACMVDLLGR G++EDA + +E MP EP A ++GSLL A R H ++
Sbjct: 520 SIK-----DPAIDHYACMVDLLGRVGELEDAKRTMERMPMEPHAGVYGSLLNASRIHKQV 574
Query: 413 DLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEV 472
+L E+AA KL +LEP N+G +ILLSNIYAS GR+ DV +R+ M+K V K G SW+E
Sbjct: 575 ELGELAANKLFELEPDNSGNFILLSNIYASAGRWKDVERIREAMKKGGVKKTTGWSWVEY 634
Query: 473 EKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYH 532
K+H F D SH I ++L ++ +REAGY D S VL DV+EEEK + H
Sbjct: 635 GGKLHKFIVAD-RSHERSDDIYQLLIELRKKMREAGYIADKSCVLRDVEEEEKEEIVGTH 693
Query: 533 SEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDG 592
SEKLA+ Y L+ G IRV+KNLRVC DCH+AIK+ISK+ GR II+RD NRFH F DG
Sbjct: 694 SEKLAICYALLVSEAGAVIRVVKNLRVCWDCHTAIKMISKLEGRVIIVRDNNRFHCFNDG 753
Query: 593 LCSCRDYW 600
LCSC+DYW
Sbjct: 754 LCSCKDYW 761
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 99/350 (28%), Positives = 183/350 (52%), Gaps = 12/350 (3%)
Query: 67 DVVAQTNMVLGYCQDGRVDEGREIFDEMP--KKNVISWTTMISGYVNNNRIDVARKLFEV 124
D + ++ Y + G + R++FDE+P ++ V W M+SGY A+ LF+V
Sbjct: 129 DAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMVSGYWKWESEGQAQWLFDV 188
Query: 125 MPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVF 184
MPE+N ++WTAM+ GY + ++ A F MP +SVV+ N+M+ G QNG ++ +F
Sbjct: 189 MPERNVITWTAMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEVLRLF 248
Query: 185 DQMR----EKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASL 240
D+M E D+ TW +I +G L + ++ +++N ++L + A
Sbjct: 249 DEMVNAGIEPDETTWVTVISACSSRGDPCLAASLVRTLHQKQIQLNCFVRTALLDMYAKC 308
Query: 241 ASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSII 300
S+ R++ +L + V + +I+ Y + G L + +F+ +++V WNS+I
Sbjct: 309 GSIGAARRIFDELGAYRNSV---TWNAMISAYTRVGNLDSARELFNTMPGRNVVTWNSMI 365
Query: 301 SGYAQYGLGEKSLKVFHEMFSS-GVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYL 359
+GYAQ G ++++F EM ++ + PD+VT+V V+SAC + G ++ G + + +
Sbjct: 366 AGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACGHLGALELGNWVVRFLTENQI 425
Query: 360 VEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTH 409
+ H A M+ + R G +EDA ++ + M D + + +L+ H
Sbjct: 426 KLSISGHNA-MIFMYSRCGSMEDAKRVFQEMATR-DVVSYNTLISGFAAH 473
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 93/329 (28%), Positives = 151/329 (45%), Gaps = 80/329 (24%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MPERNV++WTAMV GY + + A F MPE++VVSW ML G+ ++ ++ RLF
Sbjct: 189 MPERNVITWTAMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEVLRLF 248
Query: 61 DMM------PEK---------------------------------DVVAQTNMVLGYCQD 81
D M P++ + +T ++ Y +
Sbjct: 249 DEMVNAGIEPDETTWVTVISACSSRGDPCLAASLVRTLHQKQIQLNCFVRTALLDMYAKC 308
Query: 82 GRVDEGREIFDEM-PKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGY 140
G + R IFDE+ +N ++W MIS Y +D AR+LF MP +N V+W +M+ GY
Sbjct: 309 GSIGAARRIFDELGAYRNSVTWNAMISAYTRVGNLDSARELFNTMPGRNVVTWNSMIAGY 368
Query: 141 TQCGRIQDAWELFKAM-----------PMKSVVAS------------------------- 164
Q G+ A ELFK M M SV+++
Sbjct: 369 AQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACGHLGALELGNWVVRFLTENQIKLS 428
Query: 165 ----NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQK 220
N+MI + G ++ A+ VF +M +D +++ +I + G+ +E I+L + M++
Sbjct: 429 ISGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVSYNTLISGFAAHGHGVEAINLMSTMKE 488
Query: 221 EGVRVNFPSLISVLSVCASLASLDHGRQV 249
G+ + + I VL+ C+ L+ GR+V
Sbjct: 489 GGIEPDRVTFIGVLTACSHAGLLEEGRKV 517
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/274 (21%), Positives = 121/274 (44%), Gaps = 30/274 (10%)
Query: 182 VVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVN---FPSLISVLSVCA 238
++F+ + ++ M++ Y +V+ +F MQ GVR + +P LI
Sbjct: 55 LLFNSTLNPNVFVFTSMLRFYSHLQDHAKVVLMFEHMQGCGVRPDAFVYPILIK------ 108
Query: 239 SLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFAS--KDIVMW 296
++ + G HA +++ D +V + +I MY + G + + +FD + + W
Sbjct: 109 --SAGNGGIGFHAHVLKLGHGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADW 166
Query: 297 NSIISGYAQYGLGEKSLKVFHEMFSSGVMPDD--VTLVGVLSACSYTGKVKEGREIFESM 354
N+++SGY ++ ++ +F VMP+ +T +++ + ++ R F+ M
Sbjct: 167 NAMVSGYWKWESEGQAQWLF------DVMPERNVITWTAMVTGYAKVKDLEAARRYFDCM 220
Query: 355 KSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAM---PFEPDAIIWGSLLGACRTHMK 411
+ +V + M+ + G E+ ++L + M EPD W +++ AC +
Sbjct: 221 PERSVVS-----WNAMLSGYAQNGLAEEVLRLFDEMVNAGIEPDETTWVTVISACSSRGD 275
Query: 412 LDLAEVAAKKLLQLEPK-NAGPYILLSNIYASQG 444
LA + L Q + + N L ++YA G
Sbjct: 276 PCLAASLVRTLHQKQIQLNCFVRTALLDMYAKCG 309
>gi|356540339|ref|XP_003538647.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g22690-like [Glycine max]
Length = 836
Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust.
Identities = 249/647 (38%), Positives = 381/647 (58%), Gaps = 48/647 (7%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEK----NVVSWTVMLGGFIRDSRIDDA 56
M ERNVVSWT+++ GY + EA +LF+QM E N V+ ++ + ++
Sbjct: 191 MLERNVVSWTSLINGYSGRDLSKEAVSLFFQMGEAGVEPNPVTMVCVISACAKLKDLELG 250
Query: 57 RRLFDMMPEKDVVAQTNMVLG----YCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+++ + E + T MV Y + G + R+IFDE KN++ + T++S YV++
Sbjct: 251 KKVCSYISELGMELSTIMVNALVDMYMKCGDICAARQIFDECANKNLVMYNTIMSNYVHH 310
Query: 113 ----NRIDVARKLFEVMPEKNEVS-------------------------------W---- 133
+ + + ++ + P ++V+ W
Sbjct: 311 EWASDVLVILDEMLQKGPRPDKVTMLSTIAACAQLGDLSVGKSSHAYVLRNGLEGWDNIS 370
Query: 134 TAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDA 193
A++ Y +CG+ + A ++F+ MP K+VV NS+I GL ++G+++ A +FD+M E+D
Sbjct: 371 NAIIDMYMKCGKREAACKVFEHMPNKTVVTWNSLIAGLVRDGDMELAWRIFDEMLERDLV 430
Query: 194 TWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQL 253
+W+ MI + E I+LF MQ +G+ + +++ + S C L +LD + V +
Sbjct: 431 SWNTMIGALVQVSMFEEAIELFREMQNQGIPGDRVTMVGIASACGYLGALDLAKWVCTYI 490
Query: 254 VRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSL 313
+ VD+ + + L+ M+ +CG+ +F +D+ W + I A G E ++
Sbjct: 491 EKNDIHVDLQLGTALVDMFSRCGDPSSAMHVFKRMEKRDVSAWTAAIGVMAMEGNTEGAI 550
Query: 314 KVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDL 373
++F+EM V PDDV V +L+ACS+ G V +GR++F SM+ + + P HY CMVDL
Sbjct: 551 ELFNEMLEQKVKPDDVVFVALLTACSHGGSVDQGRQLFWSMEKAHGIRPHIVHYGCMVDL 610
Query: 374 LGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPY 433
LGRAG +E+A+ LI++MP EP+ ++WGSLL ACR H ++LA AA+KL QL P+ G +
Sbjct: 611 LGRAGLLEEAVDLIQSMPIEPNDVVWGSLLAACRKHKNVELAHYAAEKLTQLAPERVGIH 670
Query: 434 ILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMI 493
+LLSNIYAS G++ DVA +R M+++ V K PG S IEV+ +H FT D SH E+ I
Sbjct: 671 VLLSNIYASAGKWTDVARVRLQMKEKGVQKVPGSSSIEVQGLIHEFTSGD-ESHAENTHI 729
Query: 494 MRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRV 553
MLE+I L EAGY PD++ VL DVDE+EK H L HSEKLA+AYGL+ +G+PIRV
Sbjct: 730 GLMLEEINCRLSEAGYVPDTTNVLLDVDEQEKEHLLSRHSEKLAMAYGLITTGQGIPIRV 789
Query: 554 MKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
+KNLR+C DCHS KL+SK+ REI +RD NR+H FK+G CSCRDYW
Sbjct: 790 VKNLRMCSDCHSFAKLVSKLYNREITVRDNNRYHFFKEGFCSCRDYW 836
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 108/444 (24%), Positives = 212/444 (47%), Gaps = 51/444 (11%)
Query: 9 WTAMVRGYVEEGMITEAGTLFWQMPEKNVV----SWTVMLGGFIRDSRIDDARRL----F 60
+ ++RGY G+ +A L+ QM +V ++ +L + + + ++
Sbjct: 98 YNCLIRGYASAGLGDQAILLYVQMLVMGIVPDKYTFPFLLSACSKILALSEGVQVHGAVL 157
Query: 61 DMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARK 120
M E D+ +++ Y + G+VD GR++FD M ++NV+SWT++I+GY + A
Sbjct: 158 KMGLEGDIFVSNSLIHFYAECGKVDLGRKLFDGMLERNVVSWTSLINGYSGRDLSKEAVS 217
Query: 121 LFEVMPEKN-EVSWTAMLMGYTQCGRIQDAWELFKA-------MPMK-SVVASNSMILGL 171
LF M E E + M+ + C +++D EL K + M+ S + N+++
Sbjct: 218 LFFQMGEAGVEPNPVTMVCVISACAKLKD-LELGKKVCSYISELGMELSTIMVNALVDMY 276
Query: 172 GQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLI 231
+ G++ AR +FD+ K+ ++ ++ Y + +V+ + M ++G R + +++
Sbjct: 277 MKCGDICAARQIFDECANKNLVMYNTIMSNYVHHEWASDVLVILDEMLQKGPRPDKVTML 336
Query: 232 SVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGE-------------- 277
S ++ CA L L G+ HA ++R + +++ +I MY+KCG+
Sbjct: 337 STIAACAQLGDLSVGKSSHAYVLRNGLEGWDNISNAIIDMYMKCGKREAACKVFEHMPNK 396
Query: 278 -------LVKGKL----------IFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMF 320
L+ G + IFD +D+V WN++I Q + E+++++F EM
Sbjct: 397 TVVTWNSLIAGLVRDGDMELAWRIFDEMLERDLVSWNTMIGALVQVSMFEEAIELFREMQ 456
Query: 321 SSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQV 380
+ G+ D VT+VG+ SAC Y G + + + ++ K + + +VD+ R G
Sbjct: 457 NQGIPGDRVTMVGIASACGYLGALDLAKWVCTYIE-KNDIHVDLQLGTALVDMFSRCGDP 515
Query: 381 EDAMKLIEAMPFEPDAIIWGSLLG 404
AM + + M + D W + +G
Sbjct: 516 SSAMHVFKRME-KRDVSAWTAAIG 538
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 88/348 (25%), Positives = 167/348 (47%), Gaps = 24/348 (6%)
Query: 84 VDEGREIF--DEMPKKNVISWTTMISGYVNNNRIDVARKLF------EVMPEKNE----V 131
+D R F D+ ++ + +I GY + D A L+ ++P+K +
Sbjct: 78 LDYARNAFGDDDGNMASLFMYNCLIRGYASAGLGDQAILLYVQMLVMGIVPDKYTFPFLL 137
Query: 132 SWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKD 191
S + ++ ++ ++ A + K + SNS+I + G+V R +FD M E++
Sbjct: 138 SACSKILALSEGVQVHGA--VLKMGLEGDIFVSNSLIHFYAECGKVDLGRKLFDGMLERN 195
Query: 192 DATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHA 251
+W+ +I Y + E + LF M + GV N +++ V+S CA L L+ G++V +
Sbjct: 196 VVSWTSLINGYSGRDLSKEAVSLFFQMGEAGVEPNPVTMVCVISACAKLKDLELGKKVCS 255
Query: 252 QLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEK 311
+ ++ + + L+ MY+KCG++ + IFD A+K++VM+N+I+S Y +
Sbjct: 256 YISELGMELSTIMVNALVDMYMKCGDICAARQIFDECANKNLVMYNTIMSNYVHHEWASD 315
Query: 312 SLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHY---- 367
L + EM G PD VT++ ++AC+ G + G+ Y++ E +
Sbjct: 316 VLVILDEMLQKGPRPDKVTMLSTIAACAQLGDLSVGKS-----SHAYVLRNGLEGWDNIS 370
Query: 368 ACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLA 415
++D+ + G+ E A K+ E MP + W SL+ ++LA
Sbjct: 371 NAIIDMYMKCGKREAACKVFEHMP-NKTVVTWNSLIAGLVRDGDMELA 417
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 71/146 (48%), Gaps = 7/146 (4%)
Query: 287 NFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKE 346
N AS + M+N +I GYA GLG++++ ++ +M G++PD T +LSACS + E
Sbjct: 91 NMAS--LFMYNCLIRGYASAGLGDQAILLYVQMLVMGIVPDKYTFPFLLSACSKILALSE 148
Query: 347 GREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGAC 406
G ++ ++ K +E ++ G+V+ KL + M E + + W SL+
Sbjct: 149 GVQVHGAVL-KMGLEGDIFVSNSLIHFYAECGKVDLGRKLFDGM-LERNVVSWTSLING- 205
Query: 407 RTHMKLDLAEVAAKKLLQLEPKNAGP 432
+ DL++ A Q+ P
Sbjct: 206 --YSGRDLSKEAVSLFFQMGEAGVEP 229
>gi|225425015|ref|XP_002267613.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930 [Vitis vinifera]
gi|297738214|emb|CBI27415.3| unnamed protein product [Vitis vinifera]
Length = 743
Score = 461 bits (1186), Expect = e-127, Method: Compositional matrix adjust.
Identities = 243/679 (35%), Positives = 382/679 (56%), Gaps = 80/679 (11%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
+P+ N+ SW ++ Y + G++++ +F MP ++ VSW + + G+ DA R++
Sbjct: 66 IPQPNLFSWNTILSVYSKLGLLSQMQQIFNLMPFRDGVSWNLAISGYANYGSCSDAVRVY 125
Query: 61 DMMPE----------------------------------------KDVVAQTNMVLGYCQ 80
+M + DV + +V Y +
Sbjct: 126 KLMLKDAAMNLNRITFSTMLILCSKFRCVDLGRQINGQILKFGFGSDVFVGSPLVDMYTK 185
Query: 81 DGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGY 140
G + + + FDEMP++NV+ TMI+G + I+ +++LF + E++ +SWT M+ G
Sbjct: 186 LGLIYDAKRYFDEMPERNVVMCNTMITGLMRCGMIEESQRLFCGLKERDSISWTIMITGL 245
Query: 141 TQCGRIQDAWELFKAMPMK----------SVVASNSMILGLGQNGEV------------- 177
Q G ++A ++F+ M + SV+ + +L LG+ ++
Sbjct: 246 MQNGLEREALDMFREMRLAGFAMDQFTFGSVLTACGSLLALGEGKQIHAYVIRTDHKDNV 305
Query: 178 ----------------QKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKE 221
+ A VF +M +K+ +W+ M+ Y + G+ E + +F MQ+
Sbjct: 306 FVGSALVDMYSKCRSIKSAETVFKRMPQKNVISWTAMLVGYGQNGFSEEAVKIFFEMQRN 365
Query: 222 GVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKG 281
GV + +L SV+S CA+LASL+ G Q H + + + V++ LIT+Y KCG
Sbjct: 366 GVEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALITLYGKCGSTENS 425
Query: 282 KLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYT 341
+F +D V W ++++GYAQ+G +++ +F M + G+ PD VT +GVLSACS
Sbjct: 426 HRLFTEMNIRDEVSWTALLAGYAQFGKANETIGLFERMLAHGLKPDGVTFIGVLSACSRA 485
Query: 342 GKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGS 401
G V++G + FESM ++ + P +H C++DLLGRAG++E+A I MP PD + W +
Sbjct: 486 GLVEKGLQYFESMIKEHGIMPIVDHCTCIIDLLGRAGRLEEARNFINNMPCHPDVVGWAT 545
Query: 402 LLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNV 461
LL +CR H +++ + AA L+ LEP+N Y+LLS++YAS+G++ VA+LR+ MR + V
Sbjct: 546 LLSSCRVHGDMEIGKWAADSLIALEPQNPASYVLLSSLYASKGKWDKVAQLRRGMRDKRV 605
Query: 462 IKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVD 521
K PG SWI+ + KVH+F+ D S P I LEK+ + E GY PD S VLHDV+
Sbjct: 606 RKEPGYSWIKYKGKVHVFSADD-QSSPFLGQIYAELEKLNYKMIEEGYVPDMSSVLHDVE 664
Query: 522 EEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILR 581
E EK+ L +HSEKLA+A+GL+ +P G+PIRV+KNLRVCGDCH+A K ISK+ REI++R
Sbjct: 665 ESEKIKMLNHHSEKLAIAFGLIFVPPGLPIRVIKNLRVCGDCHNATKFISKITQREILVR 724
Query: 582 DANRFHHFKDGLCSCRDYW 600
DA RFH FKDG CSC D+W
Sbjct: 725 DAVRFHLFKDGTCSCGDFW 743
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 112/403 (27%), Positives = 209/403 (51%), Gaps = 11/403 (2%)
Query: 12 MVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQ 71
++ Y + G + A +F +P+ N+ SW +L + + + +++F++MP +D V+
Sbjct: 46 LITAYYKLGNLAYAHHVFDHIPQPNLFSWNTILSVYSKLGLLSQMQQIFNLMPFRDGVSW 105
Query: 72 TNMVLGYCQDGRVDEGREIFDEMPKK-----NVISWTTMISGYVNNNRIDVARKL----F 122
+ GY G + ++ M K N I+++TM+ +D+ R++
Sbjct: 106 NLAISGYANYGSCSDAVRVYKLMLKDAAMNLNRITFSTMLILCSKFRCVDLGRQINGQIL 165
Query: 123 EVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARV 182
+ + + ++ YT+ G I DA F MP ++VV N+MI GL + G +++++
Sbjct: 166 KFGFGSDVFVGSPLVDMYTKLGLIYDAKRYFDEMPERNVVMCNTMITGLMRCGMIEESQR 225
Query: 183 VFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLAS 242
+F ++E+D +W+ MI + G E E +D+F M+ G ++ + SVL+ C SL +
Sbjct: 226 LFCGLKERDSISWTIMITGLMQNGLEREALDMFREMRLAGFAMDQFTFGSVLTACGSLLA 285
Query: 243 LDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISG 302
L G+Q+HA ++R +V+V S L+ MY KC + + +F K+++ W +++ G
Sbjct: 286 LGEGKQIHAYVIRTDHKDNVFVGSALVDMYSKCRSIKSAETVFKRMPQKNVISWTAMLVG 345
Query: 303 YAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEP 362
Y Q G E+++K+F EM +GV PDD TL V+S+C+ ++EG + L+
Sbjct: 346 YGQNGFSEEAVKIFFEMQRNGVEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISF 405
Query: 363 KTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
T A ++ L G+ G E++ +L M D + W +LL
Sbjct: 406 ITVSNA-LITLYGKCGSTENSHRLFTEMNIR-DEVSWTALLAG 446
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/321 (22%), Positives = 134/321 (41%), Gaps = 77/321 (23%)
Query: 152 LFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEV 211
+ K + SN++I + G + A VFD + + + +W+ ++ VY + G ++
Sbjct: 31 ILKTIKQPETFLSNNLITAYYKLGNLAYAHHVFDHIPQPNLFSWNTILSVYSKLGLLSQM 90
Query: 212 IDLFTLMQ-KEGVRVNFP-------------------------------SLISVLSVCAS 239
+F LM ++GV N + ++L +C+
Sbjct: 91 QQIFNLMPFRDGVSWNLAISGYANYGSCSDAVRVYKLMLKDAAMNLNRITFSTMLILCSK 150
Query: 240 LASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVM---- 295
+D GRQ++ Q+++ F DV+V S L+ MY K G + K FD +++VM
Sbjct: 151 FRCVDLGRQINGQILKFGFGSDVFVGSPLVDMYTKLGLIYDAKRYFDEMPERNVVMCNTM 210
Query: 296 ---------------------------WNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDD 328
W +I+G Q GL ++L +F EM +G D
Sbjct: 211 ITGLMRCGMIEESQRLFCGLKERDSISWTIMITGLMQNGLEREALDMFREMRLAGFAMDQ 270
Query: 329 VTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHY------ACMVDLLGRAGQVED 382
T VL+AC + EG++I Y++ +T+H + +VD+ + ++
Sbjct: 271 FTFGSVLTACGSLLALGEGKQI-----HAYVI--RTDHKDNVFVGSALVDMYSKCRSIKS 323
Query: 383 AMKLIEAMPFEPDAIIWGSLL 403
A + + MP + + I W ++L
Sbjct: 324 AETVFKRMP-QKNVISWTAML 343
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/258 (18%), Positives = 105/258 (40%), Gaps = 37/258 (14%)
Query: 232 SVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASK 291
S+L +C + +++H +++ + ++++ LIT Y K G L +FD+
Sbjct: 10 SLLKLCCESQNQTQAKKLHCLILKTIKQPETFLSNNLITAYYKLGNLAYAHHVFDHIPQP 69
Query: 292 DIVMWNSII-------------------------------SGYAQYGLGEKSLKVFHEMF 320
++ WN+I+ SGYA YG +++V+ M
Sbjct: 70 NLFSWNTILSVYSKLGLLSQMQQIFNLMPFRDGVSWNLAISGYANYGSCSDAVRVYKLML 129
Query: 321 SSGVMP-DDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQ 379
M + +T +L CS V GR+I K+ + +VD+ + G
Sbjct: 130 KDAAMNLNRITFSTMLILCSKFRCVDLGRQI-NGQILKFGFGSDVFVGSPLVDMYTKLGL 188
Query: 380 VEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNI 439
+ DA + + MP E + ++ +++ M+ + E + + L+ +++ + ++
Sbjct: 189 IYDAKRYFDEMP-ERNVVMCNTMITGL---MRCGMIEESQRLFCGLKERDSISWTIMITG 244
Query: 440 YASQGRFHDVAELRKNMR 457
G + ++ + MR
Sbjct: 245 LMQNGLEREALDMFREMR 262
>gi|449459160|ref|XP_004147314.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
Length = 695
Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust.
Identities = 236/629 (37%), Positives = 362/629 (57%), Gaps = 45/629 (7%)
Query: 16 YVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMV 75
Y + G + +A LF +M ++++ SW +L + + I + + FD MP +D V+ +
Sbjct: 68 YAKFGKLRDAQNLFDKMLKRDIFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTI 127
Query: 76 LGYCQDGRVDEGREIFDEMPKK-------------------------------------- 97
G+ + E E+F M ++
Sbjct: 128 AGFSGNSCPQESLELFKRMQREGFEPTEYTIVSILNASAQLSDLRYGKQIHGSIIVRNFL 187
Query: 98 -NVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAM 156
NV W + Y I+ AR LF+ + +KN VSW M+ GY + G+ + L M
Sbjct: 188 GNVFIWNALTDMYAKCGEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQM 247
Query: 157 ----PMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVI 212
M V +++I Q G V +AR VF + +EKD W+ M+ Y + G E + +
Sbjct: 248 RLSGHMPDQVTMSTIIAAYCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDAL 307
Query: 213 DLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMY 272
LF M E + + +L SV+S CA LASL HG+ VH + + + ++ V+S LI MY
Sbjct: 308 LLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMY 367
Query: 273 IKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLV 332
KCG + + +F+ ++++V WN++I G AQ G + +L++F M PD+VT +
Sbjct: 368 SKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFI 427
Query: 333 GVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPF 392
G+LSAC + +++G+E F+S+ +++ + P +HYACMV+LLGR G++E A+ LI+ M
Sbjct: 428 GILSACLHCNWIEQGQEYFDSITNQHGMTPTLDHYACMVNLLGRTGRIEQAVALIKNMAH 487
Query: 393 EPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAEL 452
+PD +IW +LL C T + AEVAA+ L +L+P A PYI+LSN+YAS GR+ DVA +
Sbjct: 488 DPDFLIWSTLLSICSTKGDIVNAEVAARHLFELDPTIAVPYIMLSNMYASMGRWKDVASV 547
Query: 453 RKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPD 512
R M+ +NV K G SWIE++ +VH FT D +HPE I L + G L+E G+ P+
Sbjct: 548 RNLMKSKNVKKFAGFSWIEIDNEVHRFTSED-RTHPESEDIYEKLNMLIGKLQEEGFTPN 606
Query: 513 SSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGV-PIRVMKNLRVCGDCHSAIKLIS 571
++ VLHDV E+EK S+ +HSEKLA+A+GL+K P G+ PIR++KN+R+C DCH +K S
Sbjct: 607 TNLVLHDVGEDEKFKSICFHSEKLALAFGLIKKPNGISPIRIIKNIRICNDCHEFMKFAS 666
Query: 572 KVMGREIILRDANRFHHFKDGLCSCRDYW 600
+++GR+IILRD+NRFHHF G CSC D W
Sbjct: 667 RIIGRQIILRDSNRFHHFSTGKCSCNDNW 695
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 103/371 (27%), Positives = 185/371 (49%), Gaps = 14/371 (3%)
Query: 101 SWTTMISGYVNNNRIDVARKL-----FEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKA 155
++T ++ V N I+ A++L + + +L Y + G+++DA LF
Sbjct: 24 AYTQLVLECVRTNEINQAKRLQSHMEHHLFQPTDSFLHNQLLHLYAKFGKLRDAQNLFDK 83
Query: 156 MPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLF 215
M + + + N+++ ++G +Q + FD+M +D +++ I + E ++LF
Sbjct: 84 MLKRDIFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQESLELF 143
Query: 216 TLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKC 275
MQ+EG +++S+L+ A L+ L +G+Q+H ++ F +V++ + L MY KC
Sbjct: 144 KRMQREGFEPTEYTIVSILNASAQLSDLRYGKQIHGSIIVRNFLGNVFIWNALTDMYAKC 203
Query: 276 GELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVL 335
GE+ + + +FD K++V WN +ISGYA+ G EK + + H+M SG MPD VT+ ++
Sbjct: 204 GEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTMSTII 263
Query: 336 SACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAM---PF 392
+A G+V E R +F K K +V + M+ + G+ EDA+ L M
Sbjct: 264 AAYCQCGRVDEARRVFSEFKEKDIV-----CWTAMMVGYAKNGREEDALLLFNEMLLEHI 318
Query: 393 EPDAIIWGSLLGACRTHMKLDLAE-VAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAE 451
EPD+ S++ +C L + V K +L N L ++Y+ G D
Sbjct: 319 EPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARS 378
Query: 452 LRKNMRKRNVI 462
+ M RNV+
Sbjct: 379 VFNLMPTRNVV 389
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 94/437 (21%), Positives = 187/437 (42%), Gaps = 91/437 (20%)
Query: 19 EGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPE-----KDVVAQTN 73
+ M+ ++ L ++T ++ +R + I+ A+RL M D
Sbjct: 4 KSMLRQSVDLLCSRSTATSEAYTQLVLECVRTNEINQAKRLQSHMEHHLFQPTDSFLHNQ 63
Query: 74 MVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSW 133
++ Y + G++ + + +FD+M K+++ SW ++S Y + I + F+ MP ++ VS+
Sbjct: 64 LLHLYAKFGKLRDAQNLFDKMLKRDIFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSY 123
Query: 134 TAMLMGYTQCGRIQDAWELFKAM------PMKSVVAS----------------------- 164
+ G++ Q++ ELFK M P + + S
Sbjct: 124 NTTIAGFSGNSCPQESLELFKRMQREGFEPTEYTIVSILNASAQLSDLRYGKQIHGSIIV 183
Query: 165 ----------NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDL 214
N++ + GE+++AR +FD + +K+ +W+ MI Y + G + I L
Sbjct: 184 RNFLGNVFIWNALTDMYAKCGEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGL 243
Query: 215 FTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIK 274
M+ G + P +++ S +I Y +
Sbjct: 244 LHQMRLSG---HMPDQVTM--------------------------------STIIAAYCQ 268
Query: 275 CGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGV 334
CG + + + +F F KDIV W +++ GYA+ G E +L +F+EM + PD TL V
Sbjct: 269 CGRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSV 328
Query: 335 LSACS-----YTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEA 389
+S+C+ + G+ G+ I + + LV + ++D+ + G ++DA +
Sbjct: 329 VSSCAKLASLHHGQAVHGKSILAGLNNNLLVS------SALIDMYSKCGFIDDARSVFNL 382
Query: 390 MPFEPDAIIWGSLLGAC 406
MP + + W +++ C
Sbjct: 383 MPTR-NVVSWNAMIVGC 398
>gi|148909481|gb|ABR17838.1| unknown [Picea sitchensis]
Length = 795
Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust.
Identities = 242/647 (37%), Positives = 362/647 (55%), Gaps = 79/647 (12%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM------PEKNVVSWTVMLGGFIRDSRID 54
MP+R+VVSW A++ GY + G EA LF +M P + + + + +
Sbjct: 181 MPKRDVVSWNAIIAGYSQNGQPYEALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQG 240
Query: 55 DARRLFDMMP--EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+ + E DV+ +V Y + G V+ ++F+ MP ++V SW +I GY N
Sbjct: 241 KQIHCYAIRSGIESDVLVVNGLVNMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLN 300
Query: 113 NRIDVARKLFE----------------VMP-----------------------EKNEVSW 133
++ A F V+P E N+V
Sbjct: 301 SQHHEALAFFNRMQVRGIKPNSITMVSVLPACAHLFALEQGQQIHGYAIRSGFESNDVVG 360
Query: 134 TAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDA 193
A++ Y +CG + A++LF+ MP K+VVA N++I G Q+
Sbjct: 361 NALVNMYAKCGNVNSAYKLFERMPKKNVVAWNAIISGYSQH------------------- 401
Query: 194 TWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQL 253
G+ E + LF MQ +G++ + +++SVL CA +L+ G+Q+H
Sbjct: 402 ------------GHPHEALALFIEMQAQGIKPDSFAIVSVLPACAHFLALEQGKQIHGYT 449
Query: 254 VRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSL 313
+R F+ +V V + L+ +Y KCG + + +F+ +D+V W ++I Y +G GE +L
Sbjct: 450 IRSGFESNVVVGTGLVDIYAKCGNVNTAQKLFERMPEQDVVSWTTMILAYGIHGHGEDAL 509
Query: 314 KVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDL 373
+F +M +G D + +L+ACS+ G V +G + F+ MKS Y + PK EHYAC+VDL
Sbjct: 510 ALFSKMQETGTKLDHIAFTAILTACSHAGLVDQGLQYFQCMKSDYGLAPKLEHYACLVDL 569
Query: 374 LGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPY 433
LGRAG +++A +I+ M EPDA +WG+LLGACR H ++L E AAK L +L+P NAG Y
Sbjct: 570 LGRAGHLDEANGIIKNMSLEPDANVWGALLGACRIHCNIELGEQAAKHLFELDPDNAGYY 629
Query: 434 ILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMI 493
+LLSNIYA R+ DVA+LRK M+++ V K PGCS + V + V F D +HP+ I
Sbjct: 630 VLLSNIYAEAQRWEDVAKLRKMMKEKGVKKQPGCSVVAVHRDVQTFLVGD-RTHPQSEQI 688
Query: 494 MRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRV 553
MLE + +R+AGY P+++ L DV+EE K + L HSEKLA+++G++ G+PIR+
Sbjct: 689 YAMLEILYEQMRKAGYVPNTNLALQDVEEEAKENILSSHSEKLAISFGIINTSPGIPIRI 748
Query: 554 MKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
MKNLRVC DCH+A K ISK++GREII+RDANRFHH K+G CSC DYW
Sbjct: 749 MKNLRVCSDCHNATKFISKIVGREIIVRDANRFHHVKNGFCSCGDYW 795
Score = 199 bits (505), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 126/427 (29%), Positives = 215/427 (50%), Gaps = 28/427 (6%)
Query: 4 RNVVSWTAMVRGYVEEGMITEAGTLFWQM------PEKNVVSWTVMLGGFIRDSRIDDAR 57
N V W + GYV+ G +A L++QM P+K V + G S + R
Sbjct: 83 NNAVVWKETIIGYVKNGFWNKALRLYYQMQRTGINPDKLVFLSVIKACG--SQSDLQAGR 140
Query: 58 RLF-DMMP---EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNN 113
++ D++ E DV+ T + Y + G ++ R++FD MPK++V+SW +I+GY N
Sbjct: 141 KVHEDIIARGFESDVIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAGYSQNG 200
Query: 114 RIDVARKLFEVM------PEKNEV----SWTAMLMGYTQCGRIQDAWELFKAMPMKSVVA 163
+ A LF M P + + A L+ Q +I ++ V+
Sbjct: 201 QPYEALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIH--CYAIRSGIESDVLV 258
Query: 164 SNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGV 223
N ++ + G V A +F++M +D A+W+ +I Y E + F MQ G+
Sbjct: 259 VNGLVNMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRGI 318
Query: 224 RVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKL 283
+ N +++SVL CA L +L+ G+Q+H +R F+ + V + L+ MY KCG +
Sbjct: 319 KPNSITMVSVLPACAHLFALEQGQQIHGYAIRSGFESNDVVGNALVNMYAKCGNVNSAYK 378
Query: 284 IFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGK 343
+F+ K++V WN+IISGY+Q+G ++L +F EM + G+ PD +V VL AC++
Sbjct: 379 LFERMPKKNVVAWNAIISGYSQHGHPHEALALFIEMQAQGIKPDSFAIVSVLPACAHFLA 438
Query: 344 VKEGREIF-ESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSL 402
+++G++I +++S + E +VD+ + G V A KL E MP E D + W ++
Sbjct: 439 LEQGKQIHGYTIRSGF--ESNVVVGTGLVDIYAKCGNVNTAQKLFERMP-EQDVVSWTTM 495
Query: 403 LGACRTH 409
+ A H
Sbjct: 496 ILAYGIH 502
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 94/328 (28%), Positives = 164/328 (50%), Gaps = 22/328 (6%)
Query: 96 KKNVISWTTMISGYVNNNRIDVARKLFEVM------PEKNEVSWTAMLMGYTQCGRIQD- 148
+ N + W I GYV N + A +L+ M P+K L CG D
Sbjct: 82 RNNAVVWKETIIGYVKNGFWNKALRLYYQMQRTGINPDK-----LVFLSVIKACGSQSDL 136
Query: 149 -----AWELFKAMPMKS-VVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVY 202
E A +S V+ ++ + G ++ AR VFD+M ++D +W+ +I Y
Sbjct: 137 QAGRKVHEDIIARGFESDVIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAGY 196
Query: 203 ERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDV 262
+ G E + LF+ MQ G++ N +L+SV+ VCA L +L+ G+Q+H +R + DV
Sbjct: 197 SQNGQPYEALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGIESDV 256
Query: 263 YVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSS 322
V + L+ MY KCG + +F+ +D+ WN+II GY+ ++L F+ M
Sbjct: 257 LVVNGLVNMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVR 316
Query: 323 GVMPDDVTLVGVLSACSYTGKVKEGREIF-ESMKSKYLVEPKTEHYACMVDLLGRAGQVE 381
G+ P+ +T+V VL AC++ +++G++I +++S + E +V++ + G V
Sbjct: 317 GIKPNSITMVSVLPACAHLFALEQGQQIHGYAIRSGF--ESNDVVGNALVNMYAKCGNVN 374
Query: 382 DAMKLIEAMPFEPDAIIWGSLLGACRTH 409
A KL E MP + + + W +++ H
Sbjct: 375 SAYKLFERMP-KKNVVAWNAIISGYSQH 401
>gi|359485813|ref|XP_003633340.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 679
Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust.
Identities = 231/605 (38%), Positives = 370/605 (61%), Gaps = 9/605 (1%)
Query: 4 RNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV---VSWTVMLGGFIRDSRIDDARRLF 60
R+++ W +++ YVE + LF ++ + + + ++ G R + + +++
Sbjct: 76 RSLIHWNTIIKCYVENQFSHDGIVLFHELVHEYLPDNFTLPCVIKGCARLGVVQEGKQIH 135
Query: 61 DMMPE----KDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRID 116
+ + DV Q ++V Y + G +D R++FD M K+V+ W ++I GY ID
Sbjct: 136 GLALKIGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGYARCGEID 195
Query: 117 VARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGE 176
+A +LFE MPE++ SWT ++ G ++CG+++ A +LF MP +++V+ N+MI G ++G+
Sbjct: 196 IALQLFEEMPERDAFSWTVLVDGLSKCGKVESARKLFDQMPCRNLVSWNAMINGYMKSGD 255
Query: 177 VQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSV 236
A +F QM D TW+ MI YE G ++ + +F +M K G R + +L+SVLS
Sbjct: 256 FDSALELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKLGSRPSHATLVSVLSA 315
Query: 237 CASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMW 296
+ LA L GR +H+ + + F++D + + LI MY KCG + +F K + W
Sbjct: 316 VSGLAVLGKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGCIESALTVFRAIQKKKVGHW 375
Query: 297 NSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKS 356
+II G +G+ +L +F EM +G+ P+ + +GVL+AC++ G V +GR+ F+ M +
Sbjct: 376 TAIIVGLGIHGMANHALALFLEMCKTGLKPNAIIFIGVLNACNHAGLVDDGRQYFDMMMN 435
Query: 357 KYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAE 416
+Y +EP EHY C+VD+L RAG +E+A IE MP P+ +IW SLLG R H K+D+ E
Sbjct: 436 EYKIEPTLEHYGCLVDILCRAGHLEEAKNTIENMPISPNKVIWMSLLGGSRNHGKIDIGE 495
Query: 417 VAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKV 476
AA++++++ P+ G YILLSN+YA+ G + V+ +R+ M KR K PGCS +E + +
Sbjct: 496 YAAQRVIEVAPETIGCYILLSNMYAASGMWEKVSHVREMMYKRGFRKDPGCSSVEHKGTL 555
Query: 477 HMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVD-EEEKVHSLRYHSEK 535
H F D +SHP+ I + ++ L+ G+ PD++ VL ++ E+EK L HSE+
Sbjct: 556 HEFIVGD-ISHPQTKEIYAKMSEMKEKLKCVGHVPDTTQVLLCIEGEKEKEAELENHSER 614
Query: 536 LAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCS 595
LA+A+GL+ + G+PIR+MKNLRVC DCHS KL+SK+ REII+RD RFHHFK+G CS
Sbjct: 615 LAIAFGLINVKPGIPIRIMKNLRVCNDCHSVTKLLSKIYSREIIVRDNCRFHHFKNGSCS 674
Query: 596 CRDYW 600
C DYW
Sbjct: 675 CMDYW 679
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 85/319 (26%), Positives = 156/319 (48%), Gaps = 14/319 (4%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
M +++VV W +++ GY G I A LF +MPE++ SWTV++ G + +++ AR+LF
Sbjct: 173 MIDKDVVLWNSLIDGYARCGEIDIALQLFEEMPERDAFSWTVLVDGLSKCGKVESARKLF 232
Query: 61 DMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARK 120
D MP +++V+ M+ GY + G D E+F +MP ++++W MI+GY N + A K
Sbjct: 233 DQMPCRNLVSWNAMINGYMKSGDFDSALELFYQMPIWDLVTWNLMIAGYELNGQFMDAVK 292
Query: 121 LFEVMPEKNEVSWTAMLMGYTQC---------GRIQDAWELFKAMPMKSVVASNSMILGL 171
+F +M + A L+ GR ++ + ++ + S+I
Sbjct: 293 MFFMMLKLGSRPSHATLVSVLSAVSGLAVLGKGRWIHSYMEKNGFELDGILGT-SLIEMY 351
Query: 172 GQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLI 231
+ G ++ A VF +++K W+ +I G + LF M K G++ N I
Sbjct: 352 AKCGCIESALTVFRAIQKKKVGHWTAIIVGLGIHGMANHALALFLEMCKTGLKPNAIIFI 411
Query: 232 SVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVA--SVLITMYIKCGELVKGKLIFDNFA 289
VL+ C +D GRQ ++ ++ ++ + L+ + + G L + K +N
Sbjct: 412 GVLNACNHAGLVDDGRQYFDMMMN-EYKIEPTLEHYGCLVDILCRAGHLEEAKNTIENMP 470
Query: 290 -SKDIVMWNSIISGYAQYG 307
S + V+W S++ G +G
Sbjct: 471 ISPNKVIWMSLLGGSRNHG 489
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 104/217 (47%), Gaps = 8/217 (3%)
Query: 248 QVHAQLVRCQFDVDVYVASVLITMYI--KCGELVKGKLIFDNFASKDIVMWNSIISGYAQ 305
Q+HA ++ +V+S L+ +Y K +L + IFD + ++ WN+II Y +
Sbjct: 31 QLHAFSLKTAIFNHPFVSSRLLALYSDPKINDLGYARSIFDRIQRRSLIHWNTIIKCYVE 90
Query: 306 YGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTE 365
+ +FHE+ +PD+ TL V+ C+ G V+EG++I + K
Sbjct: 91 NQFSHDGIVLFHELVHE-YLPDNFTLPCVIKGCARLGVVQEGKQI-HGLALKIGFGSDVF 148
Query: 366 HYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQL 425
+V++ + G+++ A K+ + M + D ++W SL+ + + ++A + ++
Sbjct: 149 VQGSLVNMYSKCGEIDCARKVFDGM-IDKDVVLWNSLIDG---YARCGEIDIALQLFEEM 204
Query: 426 EPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVI 462
++A + +L + + G+ +L M RN++
Sbjct: 205 PERDAFSWTVLVDGLSKCGKVESARKLFDQMPCRNLV 241
>gi|449465002|ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
gi|449500809|ref|XP_004161200.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 926
Score = 460 bits (1183), Expect = e-126, Method: Compositional matrix adjust.
Identities = 239/618 (38%), Positives = 371/618 (60%), Gaps = 21/618 (3%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV-VSWTVMLGGFIRDSRIDD---- 55
+ +R+V+SW +M+ GYV+ G+ +F +M V + M+ F+ + I
Sbjct: 312 LTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLG 371
Query: 56 ----ARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVN 111
+ + +++V ++ Y + G ++ +F+ M +K V+SWT+MI+GYV
Sbjct: 372 KVLHSYSIKAATLDREVRFNNTLLDMYSKCGDLNSAIRVFERMDEKTVVSWTSMITGYVR 431
Query: 112 NNRIDVARKLFEVMPEKNEV----SWTAMLM-----GYTQCGRIQDAWELFKAMPMKSVV 162
D A KLF+ M + V + T++L G + G+I + + S V
Sbjct: 432 EGLSDGAIKLFDEMKSRGVVPDVYAVTSILNACAINGNLKSGKIVHDYIRENNLETNSFV 491
Query: 163 ASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEG 222
SN++ + G ++ A VF M++KD +W+ MI Y + E + LF MQ+E
Sbjct: 492 -SNALTDMYAKCGSMKDAHDVFSHMKKKDVISWNTMIGGYTKNSLPNEALTLFAEMQRES 550
Query: 223 VRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGK 282
+ + ++ +L CASLA+LD GR++H +R + D YV + ++ MY+KCG LV +
Sbjct: 551 -KPDGTTVACILPACASLAALDKGREIHGYALRNGYSEDKYVTNAVVDMYVKCGLLVLAR 609
Query: 283 LIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTG 342
+FD +KD+V W +I+GY +G G +++ F++M +G+ PD+V+ + +L ACS++G
Sbjct: 610 SLFDMIPNKDLVSWTVMIAGYGMHGYGSEAINTFNQMRMTGIEPDEVSFISILYACSHSG 669
Query: 343 KVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSL 402
+ EG +IF MK + +EP EHYACMVDLL R G + A K I+AMP +PDA IWG+L
Sbjct: 670 LLDEGWKIFNIMKKECQIEPNLEHYACMVDLLARTGNLVKAHKFIKAMPIKPDATIWGAL 729
Query: 403 LGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVI 462
L CR H + LAE A+++ +LEP+N G Y+LL+NIYA ++ +V +LRK + +R +
Sbjct: 730 LCGCRIHHDVKLAEKVAERIFELEPENTGYYVLLANIYAEAEKWEEVQKLRKKIGQRGLK 789
Query: 463 KPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDE 522
K PGCSWIE++ K+++F DC S P+ I +L+++ ++E GY P +++ L + DE
Sbjct: 790 KNPGCSWIEIKGKINIFVAGDC-SKPQAKKIELLLKRLRSKMKEEGYSPKTAYALLNADE 848
Query: 523 EEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRD 582
EK +L HSEKLA+A+G++ LP G IRV KNLRVCGDCH K +SK REIILRD
Sbjct: 849 REKEVALCGHSEKLAMAFGMLNLPPGKTIRVTKNLRVCGDCHEMAKFMSKSASREIILRD 908
Query: 583 ANRFHHFKDGLCSCRDYW 600
++RFHHFKDG CSCR YW
Sbjct: 909 SSRFHHFKDGSCSCRGYW 926
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 94/368 (25%), Positives = 192/368 (52%), Gaps = 19/368 (5%)
Query: 53 IDDARRLFDMMPEK----DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISG 108
I D RR+ ++ D + +V Y + G + EGR +FD++ + + W MIS
Sbjct: 166 IRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLSESKIFLWNLMISE 225
Query: 109 YVNNNR----IDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAM------PM 158
Y + I++ +++ E+ + N +++++L + R+++ ++ +
Sbjct: 226 YSGSGNYGESINLFKQMLELGIKPNSYTFSSILKCFAAVARVEEGRQVHGLICKLGFNSY 285
Query: 159 KSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLM 218
+VV NS+I +V+ A+ +FD++ ++D +W+ MI Y + G + I++F M
Sbjct: 286 NTVV--NSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGLDDRGIEIFIKM 343
Query: 219 QKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVR-CQFDVDVYVASVLITMYIKCGE 277
GV ++ ++++V CA++ +L G+ +H+ ++ D +V + L+ MY KCG+
Sbjct: 344 LVFGVDIDLATMVNVFVACANIGTLLLGKVLHSYSIKAATLDREVRFNNTLLDMYSKCGD 403
Query: 278 LVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSA 337
L +F+ K +V W S+I+GY + GL + ++K+F EM S GV+PD + +L+A
Sbjct: 404 LNSAIRVFERMDEKTVVSWTSMITGYVREGLSDGAIKLFDEMKSRGVVPDVYAVTSILNA 463
Query: 338 CSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAI 397
C+ G +K G+ + + ++ L E + + D+ + G ++DA + M + D I
Sbjct: 464 CAINGNLKSGKIVHDYIRENNL-ETNSFVSNALTDMYAKCGSMKDAHDVFSHMK-KKDVI 521
Query: 398 IWGSLLGA 405
W +++G
Sbjct: 522 SWNTMIGG 529
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 153/635 (24%), Positives = 265/635 (41%), Gaps = 105/635 (16%)
Query: 16 YVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQ---- 71
YV+ G + E +F ++ E + W +M+ + ++ LF M E +
Sbjct: 195 YVKCGDLKEGRMVFDKLSESKIFLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTF 254
Query: 72 TNMVLGYCQDGRVDEGREI-----------------------------------FDEMPK 96
++++ + RV+EGR++ FDE+
Sbjct: 255 SSILKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTD 314
Query: 97 KNVISWTTMISGYVNNNRIDVARKLF-EVMPEKNEVSWTAMLMGYTQC--------GRIQ 147
++VISW +MISGYV N D ++F +++ ++ M+ + C G++
Sbjct: 315 RDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLGKVL 374
Query: 148 DAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGY 207
++ + A + V +N+++ + G++ A VF++M EK +W+ MI Y R+G
Sbjct: 375 HSYSIKAATLDREVRFNNTLLDMYSKCGDLNSAIRVFERMDEKTVVSWTSMITGYVREGL 434
Query: 208 ELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASV 267
I LF M+ GV + ++ S+L+ CA +L G+ VH + + + +V++
Sbjct: 435 SDGAIKLFDEMKSRGVVPDVYAVTSILNACAINGNLKSGKIVHDYIRENNLETNSFVSNA 494
Query: 268 LITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPD 327
L MY KCG + +F + KD++ WN++I GY + L ++L +F EM PD
Sbjct: 495 LTDMYAKCGSMKDAHDVFSHMKKKDVISWNTMIGGYTKNSLPNEALTLFAEMQRES-KPD 553
Query: 328 DVTLVGVLSACSYTGKVKEGREIFESM------KSKYLVEPKTEHYA-CMVDLLGRA--- 377
T+ +L AC+ + +GREI + KY+ + Y C + +L R+
Sbjct: 554 GTTVACILPACASLAALDKGREIHGYALRNGYSEDKYVTNAVVDMYVKCGLLVLARSLFD 613
Query: 378 --------------------GQVEDAMKLIEAM---PFEPDAIIWGSLLGACRTHMKLDL 414
G +A+ M EPD + + S+L AC LD
Sbjct: 614 MIPNKDLVSWTVMIAGYGMHGYGSEAINTFNQMRMTGIEPDEVSFISILYACSHSGLLDE 673
Query: 415 A---EVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIE 471
KK Q+EP N Y + ++ A G + K M IKP W
Sbjct: 674 GWKIFNIMKKECQIEP-NLEHYACMVDLLARTGNLVKAHKFIKAMP----IKPDATIW-- 726
Query: 472 VEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLRE-AGYCPDSSFVLHDVDEEEKVHSLR 530
+ G C H + + ++ E+I L E GY + + + ++ E+V LR
Sbjct: 727 ----GALLCG--CRIHHDVKLAEKVAERIFELEPENTGYYVLLANIYAEAEKWEEVQKLR 780
Query: 531 YHSEKLAVAYGLVKLP--EGVPIRVMKNLRVCGDC 563
K GL K P + I+ N+ V GDC
Sbjct: 781 ----KKIGQRGLKKNPGCSWIEIKGKINIFVAGDC 811
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 95/200 (47%), Gaps = 6/200 (3%)
Query: 210 EVIDLFTLMQ----KEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVA 265
EV DL M+ + + + S+L +CA S+ GR+V + + +D +
Sbjct: 129 EVGDLKNAMELLCSSQNSNFDLGAYCSILQLCAERKSIRDGRRVRSIIESSGVMIDGILG 188
Query: 266 SVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVM 325
L+ MY+KCG+L +G+++FD + I +WN +IS Y+ G +S+ +F +M G+
Sbjct: 189 VKLVFMYVKCGDLKEGRMVFDKLSESKIFLWNLMISEYSGSGNYGESINLFKQMLELGIK 248
Query: 326 PDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMK 385
P+ T +L + +V+EGR++ + K ++ +V A K
Sbjct: 249 PNSYTFSSILKCFAAVARVEEGRQV-HGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQK 307
Query: 386 LIEAMPFEPDAIIWGSLLGA 405
L + + + D I W S++
Sbjct: 308 LFDELT-DRDVISWNSMISG 326
>gi|357481283|ref|XP_003610927.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512262|gb|AES93885.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 802
Score = 460 bits (1183), Expect = e-126, Method: Compositional matrix adjust.
Identities = 235/628 (37%), Positives = 363/628 (57%), Gaps = 45/628 (7%)
Query: 16 YVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKD----VVAQ 71
+ ++ + EA ++P+ + ++ ++ +R +++ +R+ + +V
Sbjct: 42 FCQQNRLKEAVDYLHRIPQPSPRLYSTLIAACLRHRKLELGKRVHAHTKASNFIPGIVIS 101
Query: 72 TNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEV 131
++ Y + G + + + +FDE+P+K++ SW TMISGY N RI+ ARKLF+ MP ++
Sbjct: 102 NRLIHMYAKCGSLVDAQMLFDEIPQKDLCSWNTMISGYANVGRIEQARKLFDEMPHRDNF 161
Query: 132 SWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASN-------------------------- 165
SW A++ GY G +A +LF+ M N
Sbjct: 162 SWNAVISGYVSQGWYMEALDLFRMMQENESSNCNMFTLSSALAAAAAISSLRRGKEIHGY 221
Query: 166 -------------SMILGL-GQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEV 211
+ +L L G+ G + +AR +FDQM +KD +W+ MI G + E
Sbjct: 222 LIRSGLELDEVVWTALLDLYGKCGSLNEARGIFDQMADKDIVSWTTMIHRCFEDGRKKEG 281
Query: 212 IDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITM 271
LF + GVR N + VL+ CA LA+ G++VH + R +D + AS L+ +
Sbjct: 282 FSLFRDLMGSGVRPNEYTFAGVLNACADLAAEQMGKEVHGYMTRVGYDPFSFAASALVHV 341
Query: 272 YIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTL 331
Y KCG + +F+ D+V W S+I GYAQ G + +L+ F + SG PD++T
Sbjct: 342 YSKCGNTETARRVFNQMPRPDLVSWTSLIVGYAQNGQPDMALQFFESLLRSGTKPDEITF 401
Query: 332 VGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMP 391
VGVLSAC++ G V G E F S+K K+ + +HYAC++DLL R+G+ ++A +I+ MP
Sbjct: 402 VGVLSACTHAGLVDIGLEYFHSVKEKHGLVHTADHYACVIDLLARSGRFKEAENIIDNMP 461
Query: 392 FEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAE 451
+PD +W SLLG CR H ++LAE AAK L +LEP+N YI LSNIYA+ G + + +
Sbjct: 462 MKPDKFLWASLLGGCRIHGNIELAERAAKALFELEPENPATYITLSNIYANAGLWTEETK 521
Query: 452 LRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCP 511
+R +M R ++K PG SWIE++++VH+F D SHP+ I L ++ ++E GY
Sbjct: 522 VRNDMDNRGIVKKPGKSWIEIKRQVHVFLVGD-TSHPKISDIHEYLGELSKKMKEEGYVA 580
Query: 512 DSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLIS 571
D++FVLHDV+EE+K ++ YHSEKLAVA+G++ G PI+V KNLR C DCH+A+K IS
Sbjct: 581 DTNFVLHDVEEEQKEQNIFYHSEKLAVAFGIISTSPGTPIKVFKNLRTCVDCHNAMKYIS 640
Query: 572 KVMGREIILRDANRFHHFKDGLCSCRDY 599
K++ R+II+RD+NRFH F DG CSC+DY
Sbjct: 641 KIVQRKIIVRDSNRFHCFVDGSCSCKDY 668
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 87/374 (23%), Positives = 152/374 (40%), Gaps = 57/374 (15%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
+P++++ SW M+ GY G I +A LF +MP ++ SW ++ G++ +A LF
Sbjct: 124 IPQKDLCSWNTMISGYANVGRIEQARKLFDEMPHRDNFSWNAVISGYVSQGWYMEALDLF 183
Query: 61 DMMPEK----------------------------------------DVVAQTNMVLGYCQ 80
MM E D V T ++ Y +
Sbjct: 184 RMMQENESSNCNMFTLSSALAAAAAISSLRRGKEIHGYLIRSGLELDEVVWTALLDLYGK 243
Query: 81 DGRVDEGREIFDEMPKKNVISWTTMISGYVNNNR----IDVARKLFEVMPEKNEVSWTAM 136
G ++E R IFD+M K+++SWTTMI + R + R L NE ++ +
Sbjct: 244 CGSLNEARGIFDQMADKDIVSWTTMIHRCFEDGRKKEGFSLFRDLMGSGVRPNEYTFAGV 303
Query: 137 LMGYTQCGRIQDAWELFKAMPMKSV----VASNSMILGLGQNGEVQKARVVFDQMREKDD 192
L Q E+ M A+++++ + G + AR VF+QM D
Sbjct: 304 LNACADLAAEQMGKEVHGYMTRVGYDPFSFAASALVHVYSKCGNTETARRVFNQMPRPDL 363
Query: 193 ATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQ 252
+W+ +I Y + G + F + + G + + + + VLS C +D G +
Sbjct: 364 VSWTSLIVGYAQNGQPDMALQFFESLLRSGTKPDEITFVGVLSACTHAGLVDIGLEYFHS 423
Query: 253 LVRCQ---FDVDVYVASVLITMYIKCGELVKGKLIFDNFASK-DIVMWNSIISGYAQYG- 307
+ D Y + +I + + G + + I DN K D +W S++ G +G
Sbjct: 424 VKEKHGLVHTADHY--ACVIDLLARSGRFKEAENIIDNMPMKPDKFLWASLLGGCRIHGN 481
Query: 308 --LGEKSLKVFHEM 319
L E++ K E+
Sbjct: 482 IELAERAAKALFEL 495
Score = 47.0 bits (110), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 68/158 (43%), Gaps = 15/158 (9%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM----PEKNVVSWTVMLGGFIRDSRIDDA 56
MP ++VSWT+++ GY + G A F + + + +++ +L +D
Sbjct: 358 MPRPDLVSWTSLIVGYAQNGQPDMALQFFESLLRSGTKPDEITFVGVLSACTHAGLVDIG 417
Query: 57 RRLFDMMPEKDVVAQTN-----MVLGYCQDGRVDEGREIFDEMP-KKNVISWTTMISGYV 110
F + EK + T ++ + GR E I D MP K + W +++ G
Sbjct: 418 LEYFHSVKEKHGLVHTADHYACVIDLLARSGRFKEAENIIDNMPMKPDKFLWASLLGGCR 477
Query: 111 NNNRIDVARK----LFEVMPEKNEVSWTAMLMGYTQCG 144
+ I++A + LFE+ PE N ++ + Y G
Sbjct: 478 IHGNIELAERAAKALFELEPE-NPATYITLSNIYANAG 514
>gi|296082276|emb|CBI21281.3| unnamed protein product [Vitis vinifera]
Length = 785
Score = 460 bits (1183), Expect = e-126, Method: Compositional matrix adjust.
Identities = 252/715 (35%), Positives = 386/715 (53%), Gaps = 117/715 (16%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MP +N VS M+ GYV+ G + EA LF M E+ V+WT+++GG+ + ++ +A LF
Sbjct: 73 MPHKNTVSTNMMISGYVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELF 132
Query: 61 DMM----PEKDVVAQTNMVLG-----------------------------------YCQD 81
M E D V ++ G YC+
Sbjct: 133 VQMQRCGTEPDYVTFVTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKS 192
Query: 82 GRVDEGREIFDEMPK------------------------------KNVISWTTMISG--- 108
R+D ++F EMP+ K W +S
Sbjct: 193 NRLDLACQLFKEMPEIDSFTFAAVLCANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALL 252
Query: 109 --YVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELF----------KAM 156
Y ++ + ARKLF+ MPE++ VS+ ++ GY G+ + A++LF K
Sbjct: 253 DFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQF 312
Query: 157 PMKSV--VASNSMILGLGQN---------------------------GEVQKARVVFDQM 187
P ++ +ASN++ +G+ G+ ++A ++F +
Sbjct: 313 PFATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNL 372
Query: 188 REKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGR 247
+ W+ MI Y +KG+ E + LF M++ V + + S+L AS+ASL G+
Sbjct: 373 THRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASASIASLSLGK 432
Query: 248 QVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYG 307
Q+H+ +++ F +V+ S L+ +Y KCG + F ++IV WN++IS YAQ G
Sbjct: 433 QLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNG 492
Query: 308 LGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHY 367
E +LK F EM SG+ PD V+ +GVLSACS++G V+EG F SM Y ++P+ EHY
Sbjct: 493 EAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSGLVEEGLWHFNSMTQIYKLDPRREHY 552
Query: 368 ACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEP 427
A +VD+L R+G+ +A KL+ MP +PD I+W S+L ACR H +LA AA +L +E
Sbjct: 553 ASVVDMLCRSGRFNEAEKLMAEMPIDPDEIMWSSVLNACRIHKNQELARRAADQLFNMEE 612
Query: 428 -KNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRD-CV 485
++A PY+ +SNIYA+ G++ +V+++ K MR R V K P SW+E++ + HMF+ D C
Sbjct: 613 LRDAAPYVNMSNIYAAAGQWENVSKVHKAMRDRGVKKLPAYSWVEIKHETHMFSANDRC- 671
Query: 486 SHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKL 545
HP+ I + ++ + + E GY PD+S LH+ DE+ KV SL+YHSE+LA+A+ L+
Sbjct: 672 -HPQIEEIRKKIDMLTKTMEELGYKPDTSCALHNEDEKFKVESLKYHSERLAIAFALIST 730
Query: 546 PEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
PEG PI VMKNLR C DCH+AIK+ISK++GREI +RD+ RFHHF+DG CSC D+W
Sbjct: 731 PEGSPILVMKNLRACIDCHAAIKVISKIVGREITVRDSTRFHHFRDGFCSCGDFW 785
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 114/438 (26%), Positives = 219/438 (50%), Gaps = 49/438 (11%)
Query: 13 VRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQT 72
V +++ G +++A LF +MP KN VS +M+ G+++ + +AR+LFD M E+ V T
Sbjct: 54 VGNFLKNGELSQARQLFEKMPHKNTVSTNMMISGYVKSGNLGEARKLFDGMVERTAVTWT 113
Query: 73 NMVLGYCQDGRVDEGREIFDEMPK----KNVISWTTMISG-------------------- 108
++ GY Q + E E+F +M + + +++ T++SG
Sbjct: 114 ILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTFVTLLSGCNGHEMGNQITQVQTQIIKL 173
Query: 109 ---------------YVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRI----QDA 149
Y +NR+D+A +LF+ MPE + ++ A+L I Q
Sbjct: 174 GYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMPEIDSFTFAAVLCANIGLDDIVLGQQIH 233
Query: 150 WELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYEL 209
+ K + +V SN+++ ++ V AR +FD+M E+D +++ +I Y G
Sbjct: 234 SFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHK 293
Query: 210 EVIDLFTLMQKEGV-RVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVL 268
DLF +Q R FP ++LS+ ++ + GRQ+HAQ + D ++ V + L
Sbjct: 294 YAFDLFRELQFTAFDRKQFP-FATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGNSL 352
Query: 269 ITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDD 328
+ MY KCG+ + ++IF N + V W ++IS Y Q G E+ L++F++M + V+ D
Sbjct: 353 VDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQ 412
Query: 329 VTLVGVLSACSYTGKVKEGREIFES-MKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLI 387
T +L A + + G+++ +KS ++ + + ++D+ + G ++DA++
Sbjct: 413 ATFASLLRASASIASLSLGKQLHSFIIKSGFMSNVFSG--SALLDVYAKCGSIKDAVQTF 470
Query: 388 EAMPFEPDAIIWGSLLGA 405
+ MP + + + W +++ A
Sbjct: 471 QEMP-DRNIVSWNAMISA 487
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 91/360 (25%), Positives = 169/360 (46%), Gaps = 43/360 (11%)
Query: 69 VAQTNMVLG-YCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPE 127
+++N +G + ++G + + R++F++MP KN +S MISGYV + + ARKLF+ M E
Sbjct: 47 TSRSNFRVGNFLKNGELSQARQLFEKMPHKNTVSTNMMISGYVKSGNLGEARKLFDGMVE 106
Query: 128 KNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGL--GQNGEVQKARVVFD 185
+ V+WT ++ GY+Q + ++A+ELF M + L G NG
Sbjct: 107 RTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTFVTLLSGCNGH--------- 157
Query: 186 QMREKDDATWSGMIKVYERKGYELEVI---------------DLFTLMQKEGVRVNFPSL 230
+M + + +IK+ GY+ +I DL + KE ++ +
Sbjct: 158 EMGNQITQVQTQIIKL----GYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMPEIDSFTF 213
Query: 231 ISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFAS 290
+VL L + G+Q+H+ +++ F +V+V++ L+ Y K ++ + +FD
Sbjct: 214 AAVLCANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPE 273
Query: 291 KDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYT-----GKVK 345
+D V +N IISGYA G + + +F E+ + +LS S T G+
Sbjct: 274 QDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQI 333
Query: 346 EGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
+ I + S+ LV +VD+ + G+ E+A + + A+ W +++ A
Sbjct: 334 HAQTIVTTADSEILVGNS------LVDMYAKCGKFEEAEMIFTNLTHR-SAVPWTAMISA 386
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/364 (22%), Positives = 156/364 (42%), Gaps = 50/364 (13%)
Query: 139 GYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGM 198
+ + G + A +LF+ MP K+ V++N MI G ++G + +AR +FD M E+ TW+ +
Sbjct: 56 NFLKNGELSQARQLFEKMPHKNTVSTNMMISGYVKSGNLGEARKLFDGMVERTAVTWTIL 115
Query: 199 IKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQF 258
I Y + E +LF MQ+ G ++ + +++LS C + QV Q+++ +
Sbjct: 116 IGGYSQLNQFKEAFELFVQMQRCGTEPDYVTFVTLLSGCNGHEMGNQITQVQTQIIKLGY 175
Query: 259 DVDVYVASVLITMYIKCGELVKGKLIFD----------------NFASKDIVM------- 295
D + V + L+ Y K L +F N DIV+
Sbjct: 176 DSRLIVGNTLVDSYCKSNRLDLACQLFKEMPEIDSFTFAAVLCANIGLDDIVLGQQIHSF 235
Query: 296 -------WNSIISG-----YAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGK 343
WN +S Y+++ + K+F EM D V+ ++S ++ GK
Sbjct: 236 VIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQ----DGVSYNVIISGYAWDGK 291
Query: 344 VKEGREIFESMKSKYLVEPKTEHYACMVDLLGRA-----GQVEDAMKLIEAMPFEPDAII 398
K ++F ++ + K +A M+ + G+ A ++ + + ++
Sbjct: 292 HKYAFDLFRELQFTAF-DRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTA--DSEILV 348
Query: 399 WGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRK 458
SL+ K + AE+ L ++A P+ + + Y +G + + +L MR+
Sbjct: 349 GNSLVDMYAKCGKFEEAEMI---FTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQ 405
Query: 459 RNVI 462
+VI
Sbjct: 406 ASVI 409
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 88/197 (44%), Gaps = 16/197 (8%)
Query: 226 NFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIF 285
N SL S+ S+ + L+ + A++V+ FD D ++ + ++K GEL + + +F
Sbjct: 11 NLTSLTSLASLQSPKLRLNVVNNIDARIVKTGFDPDTSRSNFRVGNFLKNGELSQARQLF 70
Query: 286 DNFASKDIVMWNSIISGYAQYG-LGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKV 344
+ K+ V N +ISGY + G LGE ++F V VT ++ S +
Sbjct: 71 EKMPHKNTVSTNMMISGYVKSGNLGEA-----RKLFDGMVERTAVTWTILIGGYSQLNQF 125
Query: 345 KEGREIFESMKSKYLVEPKTEHYACMVDLLG------RAGQVEDAMKLIEAMPFEPDAII 398
KE E+F M+ + EP Y V LL Q+ I + ++ I+
Sbjct: 126 KEAFELFVQMQ-RCGTEPD---YVTFVTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIV 181
Query: 399 WGSLLGACRTHMKLDLA 415
+L+ + +LDLA
Sbjct: 182 GNTLVDSYCKSNRLDLA 198
>gi|449520543|ref|XP_004167293.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g68930-like [Cucumis
sativus]
Length = 695
Score = 459 bits (1182), Expect = e-126, Method: Compositional matrix adjust.
Identities = 236/629 (37%), Positives = 361/629 (57%), Gaps = 45/629 (7%)
Query: 16 YVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMV 75
Y + G + +A LF +M +++ SW +L + + I + + FD MP +D V+ +
Sbjct: 68 YAKFGKLRDAQNLFDKMLKRDXFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTI 127
Query: 76 LGYCQDGRVDEGREIFDEMPKK-------------------------------------- 97
G+ + E E+F M ++
Sbjct: 128 AGFSGNSCPQESLELFKRMQREGFEPTEYTIVSILNASAQLLDLRYGKQIHGSIIVRNFL 187
Query: 98 -NVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAM 156
NV W + Y I+ AR LF+ + +KN VSW M+ GY + G+ + L M
Sbjct: 188 GNVFIWNALTDMYAKCGEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQM 247
Query: 157 ----PMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVI 212
M V +++I Q G V +AR VF + +EKD W+ M+ Y + G E + +
Sbjct: 248 RLSGHMPDQVTMSTIIAAYCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDAL 307
Query: 213 DLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMY 272
LF M E + + +L SV+S CA LASL HG+ VH + + + ++ V+S LI MY
Sbjct: 308 LLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMY 367
Query: 273 IKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLV 332
KCG + + +F+ ++++V WN++I G AQ G + +L++F M PD+VT +
Sbjct: 368 SKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFI 427
Query: 333 GVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPF 392
G+LSAC + +++G+E F+S+ +++ + P +HYACMV+LLGR G++E A+ LI+ M
Sbjct: 428 GILSACLHCNWIEQGQEYFDSISNQHGMTPTLDHYACMVNLLGRTGRIEQAVALIKNMAH 487
Query: 393 EPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAEL 452
+PD +IW +LL C T + AEVAA+ L +L+P A PYI+LSN+YAS GR+ DVA +
Sbjct: 488 DPDFLIWSTLLSICSTKGDIVNAEVAARHLFELDPTIAVPYIMLSNMYASMGRWKDVASV 547
Query: 453 RKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPD 512
R M+ +NV K G SWIE++ +VH FT D +HPE I L + G L+E G+ P+
Sbjct: 548 RNLMKSKNVKKFAGFSWIEIDNEVHRFTSED-RTHPESEDIYEKLNMLIGKLQEEGFTPN 606
Query: 513 SSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGV-PIRVMKNLRVCGDCHSAIKLIS 571
++ VLHDV E+EK S+ +HSEKLA+A+GL+K P G+ PIR++KN+R+C DCH +K S
Sbjct: 607 TNLVLHDVGEDEKFKSICFHSEKLALAFGLIKKPNGISPIRIIKNIRICNDCHEFMKFAS 666
Query: 572 KVMGREIILRDANRFHHFKDGLCSCRDYW 600
+++GR+IILRD+NRFHHF G CSC D W
Sbjct: 667 RIIGRQIILRDSNRFHHFSTGKCSCNDNW 695
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 103/371 (27%), Positives = 183/371 (49%), Gaps = 14/371 (3%)
Query: 101 SWTTMISGYVNNNRIDVARKL-----FEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKA 155
++T ++ V N I+ A++L + + +L Y + G+++DA LF
Sbjct: 24 AYTQLVLECVRTNEINQAKRLQSHMEHHLFQPTDSFLHNQLLHLYAKFGKLRDAQNLFDK 83
Query: 156 MPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLF 215
M + + N+++ ++G +Q + FD+M +D +++ I + E ++LF
Sbjct: 84 MLKRDXFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQESLELF 143
Query: 216 TLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKC 275
MQ+EG +++S+L+ A L L +G+Q+H ++ F +V++ + L MY KC
Sbjct: 144 KRMQREGFEPTEYTIVSILNASAQLLDLRYGKQIHGSIIVRNFLGNVFIWNALTDMYAKC 203
Query: 276 GELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVL 335
GE+ + + +FD K++V WN +ISGYA+ G EK + + H+M SG MPD VT+ ++
Sbjct: 204 GEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTMSTII 263
Query: 336 SACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAM---PF 392
+A G+V E R +F K K +V + M+ + G+ EDA+ L M
Sbjct: 264 AAYCQCGRVDEARRVFSEFKEKDIV-----CWTAMMVGYAKNGREEDALLLFNEMLLEHI 318
Query: 393 EPDAIIWGSLLGACRTHMKLDLAE-VAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAE 451
EPD+ S++ +C L + V K +L N L ++Y+ G D
Sbjct: 319 EPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARS 378
Query: 452 LRKNMRKRNVI 462
+ M RNV+
Sbjct: 379 VFNLMPTRNVV 389
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 94/437 (21%), Positives = 189/437 (43%), Gaps = 91/437 (20%)
Query: 19 EGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPE-----KDVVAQTN 73
+ M+ ++ L ++T ++ +R + I+ A+RL M D
Sbjct: 4 KSMLRQSVDLLCSRSTATSEAYTQLVLECVRTNEINQAKRLQSHMEHHLFQPTDSFLHNQ 63
Query: 74 MVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSW 133
++ Y + G++ + + +FD+M K++ SW ++S Y + I + F+ MP ++ VS+
Sbjct: 64 LLHLYAKFGKLRDAQNLFDKMLKRDXFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSY 123
Query: 134 TAMLMGYTQCGRIQDAWELFKAMPMK----------SVVASNSMILGL------------ 171
+ G++ Q++ ELFK M + S++ +++ +L L
Sbjct: 124 NTTIAGFSGNSCPQESLELFKRMQREGFEPTEYTIVSILNASAQLLDLRYGKQIHGSIIV 183
Query: 172 -----------------GQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDL 214
+ GE+++AR +FD + +K+ +W+ MI Y + G + I L
Sbjct: 184 RNFLGNVFIWNALTDMYAKCGEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGL 243
Query: 215 FTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIK 274
M+ G + P +++ S +I Y +
Sbjct: 244 LHQMRLSG---HMPDQVTM--------------------------------STIIAAYCQ 268
Query: 275 CGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGV 334
CG + + + +F F KDIV W +++ GYA+ G E +L +F+EM + PD TL V
Sbjct: 269 CGRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSV 328
Query: 335 LSACS-----YTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEA 389
+S+C+ + G+ G+ I + + LV + ++D+ + G ++DA +
Sbjct: 329 VSSCAKLASLHHGQAVHGKSILAGLNNNLLVS------SALIDMYSKCGFIDDARSVFNL 382
Query: 390 MPFEPDAIIWGSLLGAC 406
MP + + W +++ C
Sbjct: 383 MPTR-NVVSWNAMIVGC 398
>gi|356515406|ref|XP_003526391.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Glycine max]
Length = 647
Score = 459 bits (1182), Expect = e-126, Method: Compositional matrix adjust.
Identities = 232/545 (42%), Positives = 345/545 (63%), Gaps = 12/545 (2%)
Query: 65 EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEV 124
+ D+V Q +++ Y + G ++ R +FDEMP ++++SWT+MI+GY N+R A LF
Sbjct: 106 KHDLVIQNSLLFMYARCGSLEGARRLFDEMPHRDMVSWTSMITGYAQNDRASDALLLFPR 165
Query: 125 M----PEKNEVSWTAML-----MGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNG 175
M E NE + ++++ M CGR A +K +V +S++ + G
Sbjct: 166 MLSDGAEPNEFTLSSLVKCCGYMASYNCGRQIHAC-CWKYGCHSNVFVGSSLVDMYARCG 224
Query: 176 EVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLS 235
+ +A +VFD++ K++ +W+ +I Y RKG E + LF MQ+EG R + ++LS
Sbjct: 225 YLGEAMLVFDKLGCKNEVSWNALIAGYARKGEGEEALALFVRMQREGYRPTEFTYSALLS 284
Query: 236 VCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVM 295
C+S+ L+ G+ +HA L++ + YV + L+ MY K G + + +FD D+V
Sbjct: 285 SCSSMGCLEQGKWLHAHLMKSSQKLVGYVGNTLLHMYAKSGSIRDAEKVFDKLVKVDVVS 344
Query: 296 WNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMK 355
NS++ GYAQ+GLG+++ + F EM G+ P+D+T + VL+ACS+ + EG+ F M+
Sbjct: 345 CNSMLIGYAQHGLGKEAAQQFDEMIRFGIEPNDITFLSVLTACSHARLLDEGKHYFGLMR 404
Query: 356 SKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLA 415
KY +EPK HYA +VDLLGRAG ++ A IE MP EP IWG+LLGA + H ++
Sbjct: 405 -KYNIEPKVSHYATIVDLLGRAGLLDQAKSFIEEMPIEPTVAIWGALLGASKMHKNTEMG 463
Query: 416 EVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKK 475
AA+++ +L+P G + LL+NIYAS GR+ DVA++RK M+ V K P CSW+EVE
Sbjct: 464 AYAAQRVFELDPSYPGTHTLLANIYASAGRWEDVAKVRKIMKDSGVKKEPACSWVEVENS 523
Query: 476 VHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEK 535
VH+F D V+HP+ I +M EK+ ++E GY PD+S VL VD++EK +L+YHSEK
Sbjct: 524 VHVFVAND-VAHPQKEKIHKMWEKLNQKIKEIGYVPDTSHVLLFVDQQEKELNLQYHSEK 582
Query: 536 LAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCS 595
LA+++ L+ P G IR+MKN+RVCGDCHSAIK +S V+ REII+RD NRFHHF DG CS
Sbjct: 583 LALSFALLNTPPGSTIRIMKNIRVCGDCHSAIKYVSLVVKREIIVRDTNRFHHFCDGFCS 642
Query: 596 CRDYW 600
C DYW
Sbjct: 643 CGDYW 647
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 94/197 (47%), Gaps = 5/197 (2%)
Query: 209 LEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVL 268
L V+DL E R + +L L C L L G+ VH ++ F D+ + + L
Sbjct: 59 LHVLDLIDCGSLEPDRTLYNTL---LKRCTQLGKLKEGKLVHFHVLNSNFKHDLVIQNSL 115
Query: 269 ITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDD 328
+ MY +CG L + +FD +D+V W S+I+GYAQ +L +F M S G P++
Sbjct: 116 LFMYARCGSLEGARRLFDEMPHRDMVSWTSMITGYAQNDRASDALLLFPRMLSDGAEPNE 175
Query: 329 VTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIE 388
TL ++ C Y GR+I + KY + +VD+ R G + +AM + +
Sbjct: 176 FTLSSLVKCCGYMASYNCGRQI-HACCWKYGCHSNVFVGSSLVDMYARCGYLGEAMLVFD 234
Query: 389 AMPFEPDAIIWGSLLGA 405
+ + + + W +L+
Sbjct: 235 KLGCK-NEVSWNALIAG 250
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/321 (22%), Positives = 146/321 (45%), Gaps = 21/321 (6%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM------PEKNVVSWTVMLGGFIRDSRID 54
MP R++VSWT+M+ GY + ++A LF +M P + +S V G++ + +
Sbjct: 135 MPHRDMVSWTSMITGYAQNDRASDALLLFPRMLSDGAEPNEFTLSSLVKCCGYM--ASYN 192
Query: 55 DARRL----FDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYV 110
R++ + +V +++V Y + G + E +FD++ KN +SW +I+GY
Sbjct: 193 CGRQIHACCWKYGCHSNVFVGSSLVDMYARCGYLGEAMLVFDKLGCKNEVSWNALIAGYA 252
Query: 111 NNNRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRI-QDAW---ELFKAMPMKSVV 162
+ A LF M + E +++A+L + G + Q W L K+
Sbjct: 253 RKGEGEEALALFVRMQREGYRPTEFTYSALLSSCSSMGCLEQGKWLHAHLMKSSQKLVGY 312
Query: 163 ASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEG 222
N+++ ++G ++ A VFD++ + D + + M+ Y + G E F M + G
Sbjct: 313 VGNTLLHMYAKSGSIRDAEKVFDKLVKVDVVSCNSMLIGYAQHGLGKEAAQQFDEMIRFG 372
Query: 223 VRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGK 282
+ N + +SVL+ C+ LD G+ + + + V + ++ + + G L + K
Sbjct: 373 IEPNDITFLSVLTACSHARLLDEGKHYFGLMRKYNIEPKVSHYATIVDLLGRAGLLDQAK 432
Query: 283 LIFDNFA-SKDIVMWNSIISG 302
+ + +W +++
Sbjct: 433 SFIEEMPIEPTVAIWGALLGA 453
>gi|356513929|ref|XP_003525660.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 736
Score = 459 bits (1181), Expect = e-126, Method: Compositional matrix adjust.
Identities = 249/647 (38%), Positives = 364/647 (56%), Gaps = 52/647 (8%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQMPEK----NVVSWTVMLGGFIRDSRIDDARRL- 59
N+ W ++R + T + LF QM N ++ + + +A++L
Sbjct: 91 NIFIWNTLIRAHSLTPTPTSSLHLFSQMLHSGLYPNSHTFPSLFKSCAKSKATHEAKQLH 150
Query: 60 ---FDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRID 116
+ T+++ Y Q G + R +FD+ ++ +S+T +I+GYV+ +D
Sbjct: 151 AHALKLALHLHPHVHTSLIHMYSQVGELRHARLVFDKSTLRDAVSFTALITGYVSEGHVD 210
Query: 117 VARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMIL------- 169
AR+LF+ +P K+ VSW AM+ GY Q GR ++A F M V + S ++
Sbjct: 211 DARRLFDEIPAKDVVSWNAMIAGYVQSGRFEEALACFTRMQEADVSPNQSTMVSVLSACG 270
Query: 170 ------------------GLGQN--------------GEVQKARVVFDQMREKDDATWSG 197
G G+N GE+ AR +FD M +KD W+
Sbjct: 271 HLRSLELGKWIGSWVRDRGFGKNLQLVNALVDMYSKCGEIGTARKLFDGMEDKDVILWNT 330
Query: 198 MIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQL---V 254
MI Y E + LF +M +E V N + ++VL CASL +LD G+ VHA + +
Sbjct: 331 MIGGYCHLSLYEEALVLFEVMLRENVTPNDVTFLAVLPACASLGALDLGKWVHAYIDKNL 390
Query: 255 RCQFDVD-VYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSL 313
+ +V+ V + + +I MY KCG + + +F + S+ + WN++ISG A G E++L
Sbjct: 391 KGTGNVNNVSLWTSIIVMYAKCGCVEVAEQVFRSMGSRSLASWNAMISGLAMNGHAERAL 450
Query: 314 KVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDL 373
+F EM + G PDD+T VGVLSAC+ G V+ G F SM Y + PK +HY CM+DL
Sbjct: 451 GLFEEMINEGFQPDDITFVGVLSACTQAGFVELGHRYFSSMNKDYGISPKLQHYGCMIDL 510
Query: 374 LGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPY 433
L R+G+ ++A L+ M EPD IWGSLL ACR H +++ E A++L +LEP+N+G Y
Sbjct: 511 LARSGKFDEAKVLMGNMEMEPDGAIWGSLLNACRIHGQVEFGEYVAERLFELEPENSGAY 570
Query: 434 ILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMI 493
+LLSNIYA GR+ DVA++R + + + K PGC+ IE++ VH F D HP+ I
Sbjct: 571 VLLSNIYAGAGRWDDVAKIRTKLNDKGMKKVPGCTSIEIDGVVHEFLVGDKF-HPQSENI 629
Query: 494 MRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRV 553
RML+++ LL E G+ PD+S VL+D+DEE K +L HSEKLA+A+GL+ G IR+
Sbjct: 630 FRMLDEVDRLLEETGFVPDTSEVLYDMDEEWKEGALTQHSEKLAIAFGLISTKPGSTIRI 689
Query: 554 MKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
+KNLRVC +CHSA KLISK+ REII RD NRFHHFKDG CSC D W
Sbjct: 690 VKNLRVCRNCHSATKLISKIFNREIIARDRNRFHHFKDGFCSCNDRW 736
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 96/363 (26%), Positives = 162/363 (44%), Gaps = 56/363 (15%)
Query: 4 RNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMM 63
R+ VS+TA++ GYV EG + +A LF ++P K+VVSW M+ G+++ R ++A F M
Sbjct: 191 RDAVSFTALITGYVSEGHVDDARRLFDEIPAKDVVSWNAMIAGYVQSGRFEEALACFTRM 250
Query: 64 PEKDVVA-QTNMV-------------LG-------------------------YCQDGRV 84
E DV Q+ MV LG Y + G +
Sbjct: 251 QEADVSPNQSTMVSVLSACGHLRSLELGKWIGSWVRDRGFGKNLQLVNALVDMYSKCGEI 310
Query: 85 DEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEK----NEVSWTAML--- 137
R++FD M K+VI W TMI GY + + + A LFEVM + N+V++ A+L
Sbjct: 311 GTARKLFDGMEDKDVILWNTMIGGYCHLSLYEEALVLFEVMLRENVTPNDVTFLAVLPAC 370
Query: 138 --MGYTQCGRIQDAW---ELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDD 192
+G G+ A+ L + +V S+I+ + G V+ A VF M +
Sbjct: 371 ASLGALDLGKWVHAYIDKNLKGTGNVNNVSLWTSIIVMYAKCGCVEVAEQVFRSMGSRSL 430
Query: 193 ATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQ 252
A+W+ MI G+ + LF M EG + + + + VLS C ++ G + +
Sbjct: 431 ASWNAMISGLAMNGHAERALGLFEEMINEGFQPDDITFVGVLSACTQAGFVELGHRYFSS 490
Query: 253 LVR-CQFDVDVYVASVLITMYIKCGELVKGKLIFDNFA-SKDIVMWNSIISG---YAQYG 307
+ + + +I + + G+ + K++ N D +W S+++ + Q
Sbjct: 491 MNKDYGISPKLQHYGCMIDLLARSGKFDEAKVLMGNMEMEPDGAIWGSLLNACRIHGQVE 550
Query: 308 LGE 310
GE
Sbjct: 551 FGE 553
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 127/262 (48%), Gaps = 55/262 (20%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVV-SWTVM---------------- 43
+P ++VVSW AM+ GYV+ G EA F +M E +V + + M
Sbjct: 219 IPAKDVVSWNAMIAGYVQSGRFEEALACFTRMQEADVSPNQSTMVSVLSACGHLRSLELG 278
Query: 44 --LGGFIRD--------------------SRIDDARRLFDMMPEKDVVAQTNMVLGYCQD 81
+G ++RD I AR+LFD M +KDV+ M+ GYC
Sbjct: 279 KWIGSWVRDRGFGKNLQLVNALVDMYSKCGEIGTARKLFDGMEDKDVILWNTMIGGYCHL 338
Query: 82 GRVDEGREIFDEMPKKNV----ISWTTMISGYVNNNRIDVARKLFEVMPEK-------NE 130
+E +F+ M ++NV +++ ++ + +D+ + + + + N
Sbjct: 339 SLYEEALVLFEVMLRENVTPNDVTFLAVLPACASLGALDLGKWVHAYIDKNLKGTGNVNN 398
Query: 131 VS-WTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQM-- 187
VS WT++++ Y +CG ++ A ++F++M +S+ + N+MI GL NG ++A +F++M
Sbjct: 399 VSLWTSIIVMYAKCGCVEVAEQVFRSMGSRSLASWNAMISGLAMNGHAERALGLFEEMIN 458
Query: 188 --REKDDATWSGMIKVYERKGY 207
+ DD T+ G++ + G+
Sbjct: 459 EGFQPDDITFVGVLSACTQAGF 480
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/246 (19%), Positives = 106/246 (43%), Gaps = 25/246 (10%)
Query: 226 NFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITM--YIKCGELVKGKL 283
N P L ++L+ C + SL +Q+H+ +++ ++ S LI +L
Sbjct: 25 NHPHL-NLLAKCPDIPSL---KQIHSLIIKSGLHNTLFAQSKLIEFCALSPSRDLSYALS 80
Query: 284 IFDNFASK--DIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYT 341
+F + + +I +WN++I ++ SL +F +M SG+ P+ T + +C+ +
Sbjct: 81 LFHSIHHQPPNIFIWNTLIRAHSLTPTPTSSLHLFSQMLHSGLYPNSHTFPSLFKSCAKS 140
Query: 342 GKVKEGREIF-ESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWG 400
E +++ ++K + P + ++ + + G++ A + + DA+ +
Sbjct: 141 KATHEAKQLHAHALKLALHLHPHV--HTSLIHMYSQVGELRHARLVFDKSTLR-DAVSFT 197
Query: 401 SLLGACRTHMKLDLA-----EVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKN 455
+L+ + +D A E+ AK ++ AG Y GRF +
Sbjct: 198 ALITGYVSEGHVDDARRLFDEIPAKDVVSWNAMIAG--------YVQSGRFEEALACFTR 249
Query: 456 MRKRNV 461
M++ +V
Sbjct: 250 MQEADV 255
>gi|34393605|dbj|BAC83258.1| pentatricopeptide (PPR) repeat-containing protein-like protein
[Oryza sativa Japonica Group]
gi|50509373|dbj|BAD30928.1| pentatricopeptide (PPR) repeat-containing protein-like protein
[Oryza sativa Japonica Group]
Length = 808
Score = 459 bits (1181), Expect = e-126, Method: Compositional matrix adjust.
Identities = 234/589 (39%), Positives = 347/589 (58%), Gaps = 44/589 (7%)
Query: 55 DARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNR 114
DAR++ D MP+KD + T MV+GY + G V+ R +F+E+ K + W MISGYV +
Sbjct: 221 DARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISGYVQSGM 280
Query: 115 IDVARKLFEVMPEK----NEVSWTAMLMG------------------------------- 139
A +LF M + +E ++T++L
Sbjct: 281 CADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFVPEAALP 340
Query: 140 --------YTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKD 191
Y++ G+I A +F M +K VV+ N+++ G +G + KA VF M K+
Sbjct: 341 VNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYKN 400
Query: 192 DATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHA 251
D +W M+ Y G + + LF M+ E V+ + ++ C L +L HGRQ+HA
Sbjct: 401 DLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGALKHGRQLHA 460
Query: 252 QLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEK 311
LV+C F+ + L+TMY KCG + +L+F + D V WN++IS Q+G G +
Sbjct: 461 HLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAMISALGQHGHGRE 520
Query: 312 SLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMV 371
+L++F +M + G+ PD ++ + +L+AC++ G V EG FESMK + + P +HYA ++
Sbjct: 521 ALELFDQMVAEGIDPDRISFLTILTACNHAGLVDEGFHYFESMKRDFGISPGEDHYARLI 580
Query: 372 DLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAG 431
DLLGR+G++ +A LI+ MPFEP IW ++L CRT+ ++ AA +L ++ P++ G
Sbjct: 581 DLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSGCRTNGDMEFGAYAADQLFRMIPQHDG 640
Query: 432 PYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHP 491
YILLSN Y++ GR+ D A +RK MR R V K PGCSWIEV K+H+F D HPE
Sbjct: 641 TYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEVGSKIHVFLVGD-TKHPEAQ 699
Query: 492 MIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPI 551
+ + LE IG +R+ GY PD+ FVLHD++ EK + L HSEKLAV +GL+KLP G +
Sbjct: 700 EVYQFLEVIGARMRKLGYVPDTKFVLHDMEPHEKEYILFAHSEKLAVGFGLLKLPPGATV 759
Query: 552 RVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
V+KNLR+CGDCH+A+ +SK +GREI++RD RFHHFKDG CSC +YW
Sbjct: 760 TVLKNLRICGDCHTAMMFMSKAVGREIVVRDVRRFHHFKDGECSCGNYW 808
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 108/433 (24%), Positives = 185/433 (42%), Gaps = 84/433 (19%)
Query: 59 LFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMP--KKNVISWTTMISGYVNNNRID 116
LF P+ VA T++V + GR+ + FD +P +++ + M+S + +
Sbjct: 85 LFRSDPDPGPVAATSLVAAHAAAGRLRDAAAFFDAVPPARRDTVLHNAMMSAFARASLAA 144
Query: 117 VARKLFEVM-----PEKNEVSWTAMLMG-------------------------------- 139
A +F + ++ S+TA++
Sbjct: 145 PAVSVFHALLGSGSLRPDDYSFTALISAVGQMHNLAAPHCTQLHCSVLKSGAAAVLSVSN 204
Query: 140 -----YTQCGRIQDAWELFKA---MPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKD 191
Y +C + +W+ K MP K + +M++G + G+V AR VF+++ K
Sbjct: 205 ALIALYMKCDTPEASWDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKF 264
Query: 192 DATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHA 251
D W+ MI Y + G + +LF M E V ++ + SVLS CA+ HG+ VH
Sbjct: 265 DVVWNAMISGYVQSGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHG 324
Query: 252 QLVRCQFD----VDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSI-------- 299
Q++R Q + + V + L+T+Y K G++V K IFD KD+V WN+I
Sbjct: 325 QIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSG 384
Query: 300 -----------------------ISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLS 336
+SGY GL E +LK+F++M + V P D T G ++
Sbjct: 385 CLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIA 444
Query: 337 ACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDA 396
AC G +K GR++ + + E ++ + + G V DA + MP D+
Sbjct: 445 ACGELGALKHGRQLHAHL-VQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMP-NLDS 502
Query: 397 IIWGSLLGACRTH 409
+ W +++ A H
Sbjct: 503 VSWNAMISALGQH 515
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 140/328 (42%), Gaps = 82/328 (25%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MP+++ ++WT MV GYV G + A ++F ++ K V W M+ G+++ DA LF
Sbjct: 229 MPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISGYVQSGMCADAFELF 288
Query: 61 -------------------------------------------DMMPEKDVVAQTNMVLG 77
+ +PE + +V
Sbjct: 289 RRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTL 348
Query: 78 YCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAML 137
Y + G++ + IFD M K+V+SW T++SGY+++ +D A ++F+VMP KN++SW M+
Sbjct: 349 YSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMV 408
Query: 138 MGYTQCGRIQDAWELFKAMPMKSV------------------------------------ 161
GY G +DA +LF M + V
Sbjct: 409 SGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFE 468
Query: 162 ---VASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLM 218
A N+++ + G V AR+VF M D +W+ MI + G+ E ++LF M
Sbjct: 469 ASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAMISALGQHGHGREALELFDQM 528
Query: 219 QKEGVRVNFPSLISVLSVCASLASLDHG 246
EG+ + S +++L+ C +D G
Sbjct: 529 VAEGIDPDRISFLTILTACNHAGLVDEG 556
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 125/270 (46%), Gaps = 22/270 (8%)
Query: 4 RNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMM 63
++VVSW ++ GY++ G + +A +F MP KN +SW VM+ G++ +DA +LF+ M
Sbjct: 368 KDVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQM 427
Query: 64 PEKDV----VAQTNMVLGYCQDGRVDEGREIFDEMPK----KNVISWTTMISGYVNNNRI 115
+DV + + G + GR++ + + + + +++ Y +
Sbjct: 428 RAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCGAV 487
Query: 116 DVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSV----VASNSMILGL 171
+ AR +F VMP + VSW AM+ Q G ++A ELF M + + ++ +++
Sbjct: 488 NDARLVFLVMPNLDSVSWNAMISALGQHGHGREALELFDQMVAEGIDPDRISFLTILTAC 547
Query: 172 GQNGEVQKARVVFDQMR-----EKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVN 226
G V + F+ M+ + ++ +I + R G E DL M E
Sbjct: 548 NHAGLVDEGFHYFESMKRDFGISPGEDHYARLIDLLGRSGRIGEARDLIKTMPFEPT--- 604
Query: 227 FPSLI-SVLSVCASLASLDHGRQVHAQLVR 255
PS+ ++LS C + ++ G QL R
Sbjct: 605 -PSIWEAILSGCRTNGDMEFGAYAADQLFR 633
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/376 (22%), Positives = 161/376 (42%), Gaps = 26/376 (6%)
Query: 105 MISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMP--MKSVV 162
+I Y + + LF P+ V+ T+++ + GR++DA F A+P + V
Sbjct: 69 LIHLYTLSPDLATPAALFRSDPDPGPVAATSLVAAHAAAGRLRDAAAFFDAVPPARRDTV 128
Query: 163 ASNSMILGLGQNGEVQKARVVFDQM-----REKDDATWSGMIKVYER--KGYELEVIDLF 215
N+M+ + A VF + DD +++ +I + L
Sbjct: 129 LHNAMMSAFARASLAAPAVSVFHALLGSGSLRPDDYSFTALISAVGQMHNLAAPHCTQLH 188
Query: 216 TLMQKEGVRVNFP---SLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMY 272
+ K G +LI++ C + + R+V ++ D D + ++ Y
Sbjct: 189 CSVLKSGAAAVLSVSNALIALYMKCDTPEASWDARKVLDEMP----DKDDLTWTTMVVGY 244
Query: 273 IKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLV 332
++ G++ + +F+ K V+WN++ISGY Q G+ + ++F M S V D+ T
Sbjct: 245 VRRGDVNAARSVFEEVDGKFDVVWNAMISGYVQSGMCADAFELFRRMVSEKVPLDEFTFT 304
Query: 333 GVLSACSYTGKVKEGREIFES---MKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEA 389
VLSAC+ G G+ + ++ ++ E +V L + G++ A ++ +
Sbjct: 305 SVLSACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDT 364
Query: 390 MPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEP-KNAGPYILLSNIYASQGRFHD 448
M + D + W ++L LD A ++ ++ P KN ++++ + Y G D
Sbjct: 365 MNLK-DVVSWNTILSGYIDSGCLD----KAVEVFKVMPYKNDLSWMVMVSGYVHGGLSED 419
Query: 449 VAELRKNMRKRNVIKP 464
+L MR +V KP
Sbjct: 420 ALKLFNQMRAEDV-KP 434
>gi|359488035|ref|XP_003633690.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14820-like [Vitis vinifera]
Length = 731
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 230/558 (41%), Positives = 354/558 (63%), Gaps = 11/558 (1%)
Query: 53 IDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMP----KKNVISWTTMISG 108
++ AR +FD M E+DVV+ + M+ ++ D E+ EM + + ++ +M++
Sbjct: 175 VEYARLVFDKMMERDVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNL 234
Query: 109 YVN--NNRIDVARKLFEVMPEKNE----VSWTAMLMGYTQCGRIQDAWELFKAMPMKSVV 162
+ + N R+ A + + NE + TA+L Y +CG + A +LF + K+VV
Sbjct: 235 FADTANMRMGKAMHAYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVV 294
Query: 163 ASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEG 222
+ +MI G ++ +++AR +FD + +D W+ M+ Y + + +LF M+ G
Sbjct: 295 SWTAMIAGCIRSNRLEEARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSG 354
Query: 223 VRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGK 282
VR +++S+LS+CA +LD G+ VH+ + + + +VD + + L+ MY KCG++
Sbjct: 355 VRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAG 414
Query: 283 LIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTG 342
+F S+DI MWN+II+G+A +G GE++L +F EM GV P+D+T +G+L ACS+ G
Sbjct: 415 RLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAG 474
Query: 343 KVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSL 402
V EG+++FE M + + P+ EHY CMVDLLGRAG +++A ++I++MP +P+ I+WG+L
Sbjct: 475 LVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGAL 534
Query: 403 LGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVI 462
+ ACR H L E+AA +LL++EP+N G +L+SNIYA+ R+ D A +RK M+ +
Sbjct: 535 VAACRLHKNPQLGELAATQLLEIEPENCGYNVLMSNIYAAANRWSDAAGVRKTMKTVGMK 594
Query: 463 KPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDE 522
K PG S IEV VH F D SHP+ I ML ++ L EAGY PD+S VL ++DE
Sbjct: 595 KEPGHSVIEVNGTVHEFLMGD-QSHPQIRRINEMLAEMRRKLNEAGYVPDTSTVLLNIDE 653
Query: 523 EEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRD 582
EEK +L YHSEKLA+A+GL+ PIR++KNLRVC DCH+A KL+SK+ GR II+RD
Sbjct: 654 EEKETALTYHSEKLAMAFGLISTAPSTPIRIVKNLRVCNDCHAATKLLSKIYGRVIIVRD 713
Query: 583 ANRFHHFKDGLCSCRDYW 600
NRFHHF++G CSC DYW
Sbjct: 714 RNRFHHFREGYCSCGDYW 731
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 78/332 (23%), Positives = 138/332 (41%), Gaps = 80/332 (24%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDM 62
+R+V A++ Y E + A +F +M E++VVSW+ M+ R+ D A L
Sbjct: 156 DRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWSTMIRSLSRNKEFDMALELIRE 215
Query: 63 M------PEK-------DVVAQT-NMVLG---------------------------YCQD 81
M P + ++ A T NM +G Y +
Sbjct: 216 MNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNEHMGVPTTTALLDMYAKC 275
Query: 82 GRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYT 141
G + R++F+ + +K V+SWT MI+G + +NR++ AR LF+ ++ + WTAML Y
Sbjct: 276 GHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEARALFDSTQNRDVMIWTAMLSAYA 335
Query: 142 QCGRIQDAWELFKAMPMKSVVASNSMILGL------------------------------ 171
Q I A+ LF M V + I+ L
Sbjct: 336 QANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCI 395
Query: 172 ---------GQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEG 222
+ G++ A +F + +D W+ +I + GY E +D+F M+++G
Sbjct: 396 LNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQG 455
Query: 223 VRVNFPSLISVLSVCASLASLDHGRQVHAQLV 254
V+ N + I +L C+ + G+++ ++V
Sbjct: 456 VKPNDITFIGLLHACSHAGLVTEGKKLFEKMV 487
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/227 (20%), Positives = 112/227 (49%), Gaps = 8/227 (3%)
Query: 193 ATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQ 252
A W+ +I Y ++ ++++ ++K V+ SVL C ++ G+++H
Sbjct: 90 AQWNFVITSYTKRNQPRNALNVYAQLRKMDFEVDNFMAPSVLKACGQVSWTQLGKEIHGF 149
Query: 253 LVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKS 312
+++ D DV+V + L+ MY +C + +L+FD +D+V W+++I ++ + +
Sbjct: 150 VLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWSTMIRSLSRNKEFDMA 209
Query: 313 LKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGRE----IFESMKSKYLVEPKTEHYA 368
L++ EM V P +V +V +++ + T ++ G+ + + ++++ P T
Sbjct: 210 LELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNEHMGVPTT---T 266
Query: 369 CMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLA 415
++D+ + G + A +L + + + W +++ C +L+ A
Sbjct: 267 ALLDMYAKCGHLGLARQLFNGLT-QKTVVSWTAMIAGCIRSNRLEEA 312
>gi|225439588|ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Vitis vinifera]
Length = 686
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 243/620 (39%), Positives = 357/620 (57%), Gaps = 48/620 (7%)
Query: 28 LFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEK--------------------- 66
LF Q+ + N+ W M+ G + + DDA + +M +
Sbjct: 68 LFHQIKQPNIFLWNTMIRGLVSNDCFDDAIEFYGLMRSEGFLPNNFTFPFVLKACARLLD 127
Query: 67 ------------------DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISG 108
DV +T++V Y + G +++ ++FD++P KNV+SWT +ISG
Sbjct: 128 LQLGVKIHTLVVKGGFDCDVFVKTSLVCLYAKCGYLEDAHKVFDDIPDKNVVSWTAIISG 187
Query: 109 YVNNNR----IDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMP----MKS 160
Y+ + ID+ R+L E+ + + +L TQ G + + K + +++
Sbjct: 188 YIGVGKFREAIDMFRRLLEMNLAPDSFTIVRVLSACTQLGDLNSGEWIHKCIMEMGMVRN 247
Query: 161 VVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQK 220
V S++ + G ++KAR VFD M EKD +W MI+ Y G E IDLF MQ+
Sbjct: 248 VFVGTSLVDMYAKCGNMEKARSVFDGMPEKDIVSWGAMIQGYALNGLPKEAIDLFLQMQR 307
Query: 221 EGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVK 280
E V+ + +++ VLS CA L +L+ G V + R +F + + + LI +Y KCG + +
Sbjct: 308 ENVKPDCYTVVGVLSACARLGALELGEWVSGLVDRNEFLYNPVLGTALIDLYAKCGSMSR 367
Query: 281 GKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSY 340
+F KD V+WN+IISG A G + S +F ++ G+ PD T +G+L C++
Sbjct: 368 AWEVFKGMKEKDRVVWNAIISGLAMNGYVKISFGLFGQVEKLGIKPDGNTFIGLLCGCTH 427
Query: 341 TGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWG 400
G V EGR F SM + + P EHY CMVDLLGRAG +++A +LI MP E +AI+WG
Sbjct: 428 AGLVDEGRRYFNSMYRFFSLTPSIEHYGCMVDLLGRAGLLDEAHQLIRNMPMEANAIVWG 487
Query: 401 SLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRN 460
+LLGACR H LAE+A K+L++LEP N+G Y+LLSNIY++ ++ + A++R +M ++
Sbjct: 488 ALLGACRIHRDTQLAELALKQLIELEPWNSGNYVLLSNIYSANLKWDEAAKVRLSMNEKR 547
Query: 461 VIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDV 520
+ KPPGCSWIEV+ VH F D HP I L+++ ++ AGY P + FVL D+
Sbjct: 548 IQKPPGCSWIEVDGIVHEFLVGD-KYHPLSEKIYAKLDELTKKMKVAGYVPTTDFVLFDI 606
Query: 521 DEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIIL 580
+EEEK H L HSEKLA+A+GL+ IRV+KNLRVCGDCH AIKLIS + GREI +
Sbjct: 607 EEEEKEHFLGCHSEKLAIAFGLISATPTAVIRVVKNLRVCGDCHMAIKLISSITGREITV 666
Query: 581 RDANRFHHFKDGLCSCRDYW 600
RD NRFH F++G CSC DYW
Sbjct: 667 RDNNRFHCFREGSCSCNDYW 686
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 94/354 (26%), Positives = 176/354 (49%), Gaps = 20/354 (5%)
Query: 88 REIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEK----NEVSWTAMLMGYTQC 143
R +F ++ + N+ W TMI G V+N+ D A + + +M + N ++ +L C
Sbjct: 66 RFLFHQIKQPNIFLWNTMIRGLVSNDCFDDAIEFYGLMRSEGFLPNNFTFPFVL---KAC 122
Query: 144 GRIQDAWELFKAMPMK-------SVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWS 196
R+ D K + V S++ + G ++ A VFD + +K+ +W+
Sbjct: 123 ARLLDLQLGVKIHTLVVKGGFDCDVFVKTSLVCLYAKCGYLEDAHKVFDDIPDKNVVSWT 182
Query: 197 GMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRC 256
+I Y G E ID+F + + + + +++ VLS C L L+ G +H ++
Sbjct: 183 AIISGYIGVGKFREAIDMFRRLLEMNLAPDSFTIVRVLSACTQLGDLNSGEWIHKCIMEM 242
Query: 257 QFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVF 316
+V+V + L+ MY KCG + K + +FD KDIV W ++I GYA GL ++++ +F
Sbjct: 243 GMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMPEKDIVSWGAMIQGYALNGLPKEAIDLF 302
Query: 317 HEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESM-KSKYLVEPKTEHYACMVDLLG 375
+M V PD T+VGVLSAC+ G ++ G + + ++++L P ++DL
Sbjct: 303 LQMQRENVKPDCYTVVGVLSACARLGALELGEWVSGLVDRNEFLYNPVLG--TALIDLYA 360
Query: 376 RAGQVEDAMKLIEAMPFEPDAIIWGSLLG--ACRTHMKLDLAEVAAKKLLQLEP 427
+ G + A ++ + M E D ++W +++ A ++K+ + L ++P
Sbjct: 361 KCGSMSRAWEVFKGMK-EKDRVVWNAIISGLAMNGYVKISFGLFGQVEKLGIKP 413
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 124/304 (40%), Gaps = 82/304 (26%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKN----------VVSWTVMLGGFIRD 50
+P++NVVSWTA++ GY+ G EA +F ++ E N V+S LG
Sbjct: 173 IPDKNVVSWTAIISGYIGVGKFREAIDMFRRLLEMNLAPDSFTIVRVLSACTQLGDLNSG 232
Query: 51 SRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYV 110
I + + +M ++V T++V Y + G +++ R +FD MP+K+++SW MI GY
Sbjct: 233 EWIH--KCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMPEKDIVSWGAMIQGYA 290
Query: 111 NNNRIDVARKLFEVMPEK---------------------------------------NEV 131
N A LF M + N V
Sbjct: 291 LNGLPKEAIDLFLQMQRENVKPDCYTVVGVLSACARLGALELGEWVSGLVDRNEFLYNPV 350
Query: 132 SWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKD 191
TA++ Y +CG + AWE+FK M K V N++I GL NG V+ + +F Q
Sbjct: 351 LGTALIDLYAKCGSMSRAWEVFKGMKEKDRVVWNAIISGLAMNGYVKISFGLFGQ----- 405
Query: 192 DATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHA 251
++K G++ + + I +L C +D GR+
Sbjct: 406 --------------------------VEKLGIKPDGNTFIGLLCGCTHAGLVDEGRRYFN 439
Query: 252 QLVR 255
+ R
Sbjct: 440 SMYR 443
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 99/219 (45%), Gaps = 22/219 (10%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVV--SWTV--MLGGFIRDSRIDDA 56
MPE+++VSW AM++GY G+ EA LF QM +NV +TV +L R ++
Sbjct: 274 MPEKDIVSWGAMIQGYALNGLPKEAIDLFLQMQRENVKPDCYTVVGVLSACARLGALELG 333
Query: 57 RRLFDMMPEKDV----VAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+ ++ + V T ++ Y + G + E+F M +K+ + W +ISG N
Sbjct: 334 EWVSGLVDRNEFLYNPVLGTALIDLYAKCGSMSRAWEVFKGMKEKDRVVWNAIISGLAMN 393
Query: 113 NRIDVARKLF------EVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAM-----PMKSV 161
+ ++ LF + P+ N ++ +L G T G + + F +M S+
Sbjct: 394 GYVKISFGLFGQVEKLGIKPDGN--TFIGLLCGCTHAGLVDEGRRYFNSMYRFFSLTPSI 451
Query: 162 VASNSMILGLGQNGEVQKARVVFDQM-REKDDATWSGMI 199
M+ LG+ G + +A + M E + W ++
Sbjct: 452 EHYGCMVDLLGRAGLLDEAHQLIRNMPMEANAIVWGALL 490
>gi|302773622|ref|XP_002970228.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
gi|300161744|gb|EFJ28358.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
Length = 936
Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust.
Identities = 242/618 (39%), Positives = 360/618 (58%), Gaps = 21/618 (3%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEK----NVVSWTVMLGGFIRDSRIDDA 56
M + N+++W+A++ + + G EA F M ++ N V++ +L GF S +++
Sbjct: 322 MKQTNLITWSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEEL 381
Query: 57 RRLFDMMPEKDVVAQTNM------VLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYV 110
R+ ++ E + T M V G C+ D+ R +FD++ N+ISW +MI YV
Sbjct: 382 SRIHLLITEHGLDDTTTMRNALVNVYGRCESP--DDARTVFDQLELPNLISWNSMIGIYV 439
Query: 111 NNNRIDVARKLFEVMPEK----NEVSWTAMLMGYT--QCGRIQDAWE--LFKAMPMKSVV 162
R D A +LF M ++ + V++ +L T GR + + ++ S +
Sbjct: 440 QCERHDDALQLFRTMQQQGIQPDRVNFMTILGACTIGSHGRTRKLVHQCVEESGLGGSPL 499
Query: 163 ASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEG 222
S++ + GE+ A V+ +M E+ W+ +I Y G E ++ + +Q E
Sbjct: 500 VQTSLVNMYAKAGELDVAEVILQEMDEQQITAWNVLINGYALHGRSREALEAYQKLQLEA 559
Query: 223 VRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGK 282
+ V+ + ISVL+ C S SL G+ +H+ V C D DV V + L MY KCG + +
Sbjct: 560 IPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSDVIVKNALTNMYSKCGSMENAR 619
Query: 283 LIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTG 342
IFD+ + V WN ++ YAQ+G E+ LK+ +M GV + +T V VLS+CS+ G
Sbjct: 620 RIFDSMPIRSAVSWNGMLQAYAQHGESEEVLKLIRKMEQEGVKLNGITFVSVLSSCSHAG 679
Query: 343 KVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSL 402
+ EG + F S+ +E KTEHY C+VDLLGRAG++++A K I MP EP + W SL
Sbjct: 680 LIAEGCQYFHSLGHDRGIEVKTEHYGCLVDLLGRAGKLQEAEKYISKMPLEPGIVTWASL 739
Query: 403 LGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVI 462
LGACR LD ++AA KLL+L+P N+ ++LSNIY+ +G + + A+LR+ M R V
Sbjct: 740 LGACRVQKDLDRGKLAAGKLLELDPGNSSASVVLSNIYSERGDWKNAAKLRRAMASRRVK 799
Query: 463 KPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDE 522
K PG S I+V+ KVH F RD SHP I +E++ +REAGY PD+ VLHDVDE
Sbjct: 800 KVPGISSIQVKNKVHEFRVRD-TSHPRAAEIYDKVEELCFAMREAGYVPDTKMVLHDVDE 858
Query: 523 EEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRD 582
E+K L YHSEKLA+A+GL+ PE + + KNLRVC DCH+A K ISK+ GREI++RD
Sbjct: 859 EQKESLLAYHSEKLAIAFGLISTPETSSLHIFKNLRVCEDCHTATKFISKITGREIVVRD 918
Query: 583 ANRFHHFKDGLCSCRDYW 600
+RFHHF+DG CSC+DYW
Sbjct: 919 NHRFHHFRDGSCSCKDYW 936
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 116/461 (25%), Positives = 198/461 (42%), Gaps = 92/461 (19%)
Query: 4 RNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVML-------GGF--IRDSRID 54
RNVVSW M+ Y EA LF M + V + L G F +RD +
Sbjct: 21 RNVVSWNVMISAYSSYKSFQEALALFHAMLLEGVAPNAITLVAVLNSCGSFRELRDGILV 80
Query: 55 DARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGY----- 109
A L + +VA T ++ Y + G + + + +F+EM +KNV++W M+ Y
Sbjct: 81 HALSLERGFFQNTLVA-TALLNMYGKCGTLLDAQSVFEEMAEKNVVTWNAMLGVYSLQGC 139
Query: 110 ----------------VNNNRI------------DVAR--KLFEVMPEKNEVSW-----T 134
V N I D R K ++E S T
Sbjct: 140 CWKLAVELFTRMLLEGVKANVITFLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNT 199
Query: 135 AMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDAT 194
A++ YT+CG + DA ++F MP +SV T
Sbjct: 200 ALVNTYTKCGSLTDARKVFDGMPCRSV-------------------------------GT 228
Query: 195 WSGMIKVY---ERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHA 251
W+ MI Y ER G E +F MQ+EG R + + +S+L C + +L HG+ V
Sbjct: 229 WNSMISAYSISERSG---EAFFIFQRMQQEGERCDRVTFLSILDACVNPETLQHGKHVRE 285
Query: 252 QLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEK 311
+ F++D++V + LITMY +C +F +++ W++II+ +A +G +
Sbjct: 286 SISETSFELDLFVGTALITMYARCRSPEDAAQVFGRMKQTNLITWSAIITAFADHGHCGE 345
Query: 312 SLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMV 371
+L+ F M G++P+ VT + +L+ + ++E I + +++ ++ T +V
Sbjct: 346 ALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSRI-HLLITEHGLDDTTTMRNALV 404
Query: 372 DLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLG---ACRTH 409
++ GR +DA + + + P+ I W S++G C H
Sbjct: 405 NVYGRCESPDDARTVFDQLEL-PNLISWNSMIGIYVQCERH 444
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 110/462 (23%), Positives = 217/462 (46%), Gaps = 24/462 (5%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITE-AGTLFWQM----PEKNVVSWTVMLGGFIRDSRIDD 55
M E+NVV+W AM+ Y +G + A LF +M + NV+++ +L + +
Sbjct: 119 MAEKNVVTWNAMLGVYSLQGCCWKLAVELFTRMLLEGVKANVITFLNVLNSVVDPDALRK 178
Query: 56 ARRLFDMMPEK----DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVN 111
+ + + E DV T +V Y + G + + R++FD MP ++V +W +MIS Y
Sbjct: 179 GKFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISAYSI 238
Query: 112 NNRIDVARKLFEVMPEKNE----VSWTAMLMGYTQCGRIQDAWELFKAMPMKS----VVA 163
+ R A +F+ M ++ E V++ ++L +Q + +++ S +
Sbjct: 239 SERSGEAFFIFQRMQQEGERCDRVTFLSILDACVNPETLQHGKHVRESISETSFELDLFV 298
Query: 164 SNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGV 223
++I + + A VF +M++ + TWS +I + G+ E + F +MQ+EG+
Sbjct: 299 GTALITMYARCRSPEDAAQVFGRMKQTNLITWSAIITAFADHGHCGEALRYFRMMQQEGI 358
Query: 224 RVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKL 283
N + IS+L+ + + L+ ++H + D + + L+ +Y +C +
Sbjct: 359 LPNRVTFISLLNGFTTPSGLEELSRIHLLITEHGLDDTTTMRNALVNVYGRCESPDDART 418
Query: 284 IFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGK 343
+FD +++ WNS+I Y Q + +L++F M G+ PD V + +L AC+
Sbjct: 419 VFDQLELPNLISWNSMIGIYVQCERHDDALQLFRTMQQQGIQPDRVNFMTILGACTIGSH 478
Query: 344 VKEGREIFESMKSKYL-VEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSL 402
+ + + + ++ L P + +V++ +AG+++ A +++ M E W L
Sbjct: 479 GRTRKLVHQCVEESGLGGSPLVQ--TSLVNMYAKAGELDVAEVILQEMD-EQQITAWNVL 535
Query: 403 LGACRTHMKLDLAEVAAKKLLQLE--PKNAGPYILLSNIYAS 442
+ H + A A +K LQLE P + +I + N S
Sbjct: 536 INGYALHGRSREALEAYQK-LQLEAIPVDKVTFISVLNACTS 576
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 92/345 (26%), Positives = 166/345 (48%), Gaps = 19/345 (5%)
Query: 78 YCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVM----PEKNEVSW 133
Y + G + + F ++ +NV+SW MIS Y + A LF M N ++
Sbjct: 2 YSRCGSLGDAVAAFGKIRARNVVSWNVMISAYSSYKSFQEALALFHAMLLEGVAPNAITL 61
Query: 134 TAMLMGYTQCGRIQDAWE--LFKAMPMKSVVASNSMILG-----LGQNGEVQKARVVFDQ 186
A+L CG ++ + L A+ ++ N+++ G+ G + A+ VF++
Sbjct: 62 VAVL---NSCGSFRELRDGILVHALSLERGFFQNTLVATALLNMYGKCGTLLDAQSVFEE 118
Query: 187 MREKDDATWSGMIKVYERKG--YELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLD 244
M EK+ TW+ M+ VY +G ++L V +LFT M EGV+ N + ++VL+ +L
Sbjct: 119 MAEKNVVTWNAMLGVYSLQGCCWKLAV-ELFTRMLLEGVKANVITFLNVLNSVVDPDALR 177
Query: 245 HGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYA 304
G+ +H+ + + +DV+V + L+ Y KCG L + +FD + + WNS+IS Y+
Sbjct: 178 KGKFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISAYS 237
Query: 305 QYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKT 364
++ +F M G D VT + +L AC ++ G+ + ES+ S+ E
Sbjct: 238 ISERSGEAFFIFQRMQQEGERCDRVTFLSILDACVNPETLQHGKHVRESI-SETSFELDL 296
Query: 365 EHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTH 409
++ + R EDA ++ M + + I W +++ A H
Sbjct: 297 FVGTALITMYARCRSPEDAAQVFGRMK-QTNLITWSAIITAFADH 340
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 73/135 (54%), Gaps = 4/135 (2%)
Query: 271 MYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVT 330
MY +CG L F ++++V WN +IS Y+ Y +++L +FH M GV P+ +T
Sbjct: 1 MYSRCGSLGDAVAAFGKIRARNVVSWNVMISAYSSYKSFQEALALFHAMLLEGVAPNAIT 60
Query: 331 LVGVLSACSYTGKVKEGREIFE-SMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEA 389
LV VL++C ++++G + S++ + T ++++ G+ G + DA + E
Sbjct: 61 LVAVLNSCGSFRELRDGILVHALSLERGFF--QNTLVATALLNMYGKCGTLLDAQSVFEE 118
Query: 390 MPFEPDAIIWGSLLG 404
M E + + W ++LG
Sbjct: 119 MA-EKNVVTWNAMLG 132
>gi|328774763|gb|AEB39781.1| pentatricopeptide repeat protein 79 [Funaria hygrometrica]
Length = 820
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 238/616 (38%), Positives = 367/616 (59%), Gaps = 17/616 (2%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV----VSWTVMLGGFIRDSRIDDA 56
M R+ VSWT + Y E G E+ + M ++ V +++ +L + ++
Sbjct: 206 MASRDEVSWTTLTGAYAESGYAQESLKTYHAMLQEGVRPSRITYMNVLSACGSLAALEKG 265
Query: 57 RRLFDMMPEK----DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+++ + E DV T + Y + G V + RE+F+ +P ++VI+W TMI G V++
Sbjct: 266 KQIHAQIVESEHHSDVRVSTALTKMYIKCGAVKDAREVFECLPNRDVIAWNTMIGGLVDS 325
Query: 113 NRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVA----S 164
+++ A +F M ++ + V++ A+L + G + E+ +V+
Sbjct: 326 GQLEEAHGMFHRMLKECVAPDRVTYLAILSACARPGGLACGKEIHARAVKDGLVSDVRFG 385
Query: 165 NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVR 224
N++I + G ++ AR VFD+M ++D +W+ ++ Y G +E F M ++GV
Sbjct: 386 NALINMYSKAGSMKDARQVFDRMPKRDVVSWTALVGGYADCGQVVESFSTFKKMLQQGVE 445
Query: 225 VNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLI 284
N + + VL C++ +L G+++HA++V+ D+ VA+ L++MY KCG + +
Sbjct: 446 ANKITYMCVLKACSNPVALKWGKEIHAEVVKAGIFADLAVANALMSMYFKCGSVEDAIRV 505
Query: 285 FDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKV 344
+ +++D+V WN++I G AQ G G ++L+ F M S + P+ T V V+SAC V
Sbjct: 506 SEGMSTRDVVTWNTLIGGLAQNGRGLEALQKFEVMKSEEMRPNATTFVNVMSACRVRNLV 565
Query: 345 KEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLG 404
+EGR F SM+ Y + P +HYACMVD+L RAG + +A +I MPF+P A +WG+LL
Sbjct: 566 EEGRRQFASMRKDYGIVPTEKHYACMVDILARAGHLGEAEDVILTMPFKPSAAMWGALLA 625
Query: 405 ACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKP 464
ACR H +++ E AA++ L+LEP+NAG Y+ LS IYA+ G + DVA+LRK M++R V K
Sbjct: 626 ACRAHGNVEIGEQAAEQCLKLEPQNAGTYVSLSFIYAAAGMWRDVAKLRKLMKERGVKKE 685
Query: 465 PGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEE 524
PG SWIEV +VH F D SHP I LE + ++ GY PD+ FV+HD+D+E
Sbjct: 686 PGRSWIEVAGEVHSFVAGD-QSHPRTEEIYSELEALTKQIKSLGYVPDTRFVMHDLDQEG 744
Query: 525 KVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDAN 584
K ++ +HSEKLA+AYGL+ P PIRV KNLRVC DCH+A K ISK+ GREII RDA+
Sbjct: 745 KERAVCHHSEKLAIAYGLISTPPETPIRVSKNLRVCTDCHTATKFISKITGREIIARDAH 804
Query: 585 RFHHFKDGLCSCRDYW 600
RFHHFK+G CSC DYW
Sbjct: 805 RFHHFKNGECSCGDYW 820
Score = 191 bits (486), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 108/353 (30%), Positives = 186/353 (52%), Gaps = 12/353 (3%)
Query: 60 FDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVAR 119
F M P ++ ++ Y G V+E R +FD+ K+V+SW MISGY + A
Sbjct: 73 FGMKPNVYII--NTLLKLYVHCGSVNEARRLFDKFSNKSVVSWNVMISGYAHRGLGQEAF 130
Query: 120 KLFEVMP----EKNEVSWTAMLMGYTQCGRIQDAWEL----FKAMPMKSVVASNSMILGL 171
LF +M E ++ ++ ++L + + E+ +A + N++I
Sbjct: 131 NLFTLMQQEGLEPDKFTFVSILSACSSPAALNWGREVHVRVMEAGLANNATVGNALISMY 190
Query: 172 GQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLI 231
+ G V+ AR VFD M +D+ +W+ + Y GY E + + M +EGVR + + +
Sbjct: 191 AKCGSVRDARRVFDAMASRDEVSWTTLTGAYAESGYAQESLKTYHAMLQEGVRPSRITYM 250
Query: 232 SVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASK 291
+VLS C SLA+L+ G+Q+HAQ+V + DV V++ L MYIKCG + + +F+ ++
Sbjct: 251 NVLSACGSLAALEKGKQIHAQIVESEHHSDVRVSTALTKMYIKCGAVKDAREVFECLPNR 310
Query: 292 DIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIF 351
D++ WN++I G G E++ +FH M V PD VT + +LSAC+ G + G+EI
Sbjct: 311 DVIAWNTMIGGLVDSGQLEEAHGMFHRMLKECVAPDRVTYLAILSACARPGGLACGKEIH 370
Query: 352 ESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLG 404
LV ++++ +AG ++DA ++ + MP + D + W +L+G
Sbjct: 371 ARAVKDGLVS-DVRFGNALINMYSKAGSMKDARQVFDRMP-KRDVVSWTALVG 421
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 118/448 (26%), Positives = 198/448 (44%), Gaps = 51/448 (11%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMP 64
NV +++ YV G + EA LF + K+VVSW VM+ G+ +A LF +M
Sbjct: 78 NVYIINTLLKLYVHCGSVNEARRLFDKFSNKSVVSWNVMISGYAHRGLGQEAFNLFTLMQ 137
Query: 65 ----EKDVVAQTNMVLGYCQDGRVDEGRE----IFDEMPKKNVISWTTMISGYVNNNRID 116
E D +++ ++ GRE + + N +IS Y +
Sbjct: 138 QEGLEPDKFTFVSILSACSSPAALNWGREVHVRVMEAGLANNATVGNALISMYAKCGSVR 197
Query: 117 VARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGL----- 171
AR++F+ M ++EVSWT + Y + G Q++ + + AM + V S + +
Sbjct: 198 DARRVFDAMASRDEVSWTTLTGAYAESGYAQESLKTYHAMLQEGVRPSRITYMNVLSACG 257
Query: 172 -------GQN---------------------------GEVQKARVVFDQMREKDDATWSG 197
G+ G V+ AR VF+ + +D W+
Sbjct: 258 SLAALEKGKQIHAQIVESEHHSDVRVSTALTKMYIKCGAVKDAREVFECLPNRDVIAWNT 317
Query: 198 MIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQ 257
MI G E +F M KE V + + +++LS CA L G+++HA+ V+
Sbjct: 318 MIGGLVDSGQLEEAHGMFHRMLKECVAPDRVTYLAILSACARPGGLACGKEIHARAVKDG 377
Query: 258 FDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFH 317
DV + LI MY K G + + +FD +D+V W +++ GYA G +S F
Sbjct: 378 LVSDVRFGNALINMYSKAGSMKDARQVFDRMPKRDVVSWTALVGGYADCGQVVESFSTFK 437
Query: 318 EMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIF-ESMKSKYLVEPKTEHYACMVDLLGR 376
+M GV + +T + VL ACS +K G+EI E +K+ + + ++ + +
Sbjct: 438 KMLQQGVEANKITYMCVLKACSNPVALKWGKEIHAEVVKAGIFADLAVAN--ALMSMYFK 495
Query: 377 AGQVEDAMKLIEAMPFEPDAIIWGSLLG 404
G VEDA+++ E M D + W +L+G
Sbjct: 496 CGSVEDAIRVSEGMSTR-DVVTWNTLIG 522
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 104/193 (53%), Gaps = 2/193 (1%)
Query: 213 DLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMY 272
D+ + ++G +V+ + +L C L G+QVH ++R +VY+ + L+ +Y
Sbjct: 30 DVLQYLHQKGSQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRFGMKPNVYIINTLLKLY 89
Query: 273 IKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLV 332
+ CG + + + +FD F++K +V WN +ISGYA GLG+++ +F M G+ PD T V
Sbjct: 90 VHCGSVNEARRLFDKFSNKSVVSWNVMISGYAHRGLGQEAFNLFTLMQQEGLEPDKFTFV 149
Query: 333 GVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPF 392
+LSACS + GRE+ + L T A ++ + + G V DA ++ +AM
Sbjct: 150 SILSACSSPAALNWGREVHVRVMEAGLANNATVGNA-LISMYAKCGSVRDARRVFDAMA- 207
Query: 393 EPDAIIWGSLLGA 405
D + W +L GA
Sbjct: 208 SRDEVSWTTLTGA 220
>gi|328774753|gb|AEB39776.1| pentatricopeptide repeat protein 78 [Funaria hygrometrica]
Length = 1020
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 231/618 (37%), Positives = 367/618 (59%), Gaps = 21/618 (3%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEK----NVVSWTVMLGGFIRDSRIDDA 56
+ R++++W M+ G E G EA ++ QM + N +++ ++L + + +
Sbjct: 406 LVNRDLIAWNTMIGGLAEGGNWEEASEIYHQMQREGMMPNKITYVILLNACVNPTALHWG 465
Query: 57 RRLFDMMPEK----DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
R + + + D+ Q ++ Y + G + + R +F++M +K++ISWT MI G +
Sbjct: 466 REIHSRVVKDGFMFDISVQNALISMYARCGSIKDARLLFNKMVRKDIISWTAMIGGLAKS 525
Query: 113 NRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAW------ELFKAMPMKSVV 162
A +F+ M + N V++T++L + + W ++ +A
Sbjct: 526 GLGAEALAVFQDMQQAGLKPNRVTYTSILNACSSPAALD--WGRRIHQQVIEAGLATDAH 583
Query: 163 ASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEG 222
+N+++ G V+ AR VFD+M ++D ++ MI Y E + LF +Q+EG
Sbjct: 584 VANTLVNMYSMCGSVKDARQVFDRMTQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEG 643
Query: 223 VRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGK 282
++ + + I++L+ CA+ SL+ +++H+ +++ + D + + L++ Y KCG
Sbjct: 644 LKPDKVTYINMLNACANSGSLEWAKEIHSLVLKDGYLSDTSLGNALVSTYAKCGSFSDAL 703
Query: 283 LIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTG 342
L+FD ++++ WN+II G AQ+G G+ L++F M G+ PD VT V +LSACS+ G
Sbjct: 704 LVFDKMMKRNVISWNAIIGGCAQHGRGQDVLQLFERMKMEGIKPDIVTFVSLLSACSHAG 763
Query: 343 KVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSL 402
++EGR F SM + + P EHY CMVDLLGRAGQ+++ LI+ MPF+ + IWG+L
Sbjct: 764 LLEEGRRYFCSMSRDFGITPTIEHYGCMVDLLGRAGQLDEVEALIKTMPFQANTRIWGAL 823
Query: 403 LGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVI 462
LGACR H + +AE AA+ L+L+P NA Y+ LS++YA+ G + A+LRK M +R V
Sbjct: 824 LGACRIHGNVPVAERAAESSLKLDPDNAAVYVALSHMYAAAGMWDSAAKLRKLMEQRGVT 883
Query: 463 KPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDE 522
K PG SWIEV K+H F D SHPE I L+K+ ++ GY PD+ V+HDVDE
Sbjct: 884 KEPGRSWIEVGDKLHYFVAED-RSHPESEKIYAELDKLTHAMKMEGYVPDTRSVMHDVDE 942
Query: 523 EEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRD 582
EK +++ +HSE+LA+AYGL+ G PIR+ KNLRVC DCH+A K I+K++ REI+ RD
Sbjct: 943 GEKENAVCHHSERLAIAYGLISTLPGTPIRIFKNLRVCPDCHTATKFITKIVDREIVARD 1002
Query: 583 ANRFHHFKDGLCSCRDYW 600
NRFHHFKDG+CSC DYW
Sbjct: 1003 VNRFHHFKDGVCSCGDYW 1020
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 115/426 (26%), Positives = 221/426 (51%), Gaps = 20/426 (4%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVV----SWTVMLGGFIRDSRIDDA 56
M ++VVSWT ++ GY + G A +F +M ++ VV ++ +L F + +
Sbjct: 305 METKSVVSWTIIIGGYADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFSGPAALKWG 364
Query: 57 R----RLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+ + + E D+ T +V Y + G + R++F+++ +++I+W TMI G
Sbjct: 365 KTVHSHILNAGHESDLAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEG 424
Query: 113 NRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELF----KAMPMKSVVAS 164
+ A +++ M + N++++ +L + E+ K M +
Sbjct: 425 GNWEEASEIYHQMQREGMMPNKITYVILLNACVNPTALHWGREIHSRVVKDGFMFDISVQ 484
Query: 165 NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVR 224
N++I + G ++ AR++F++M KD +W+ MI + G E + +F MQ+ G++
Sbjct: 485 NALISMYARCGSIKDARLLFNKMVRKDIISWTAMIGGLAKSGLGAEALAVFQDMQQAGLK 544
Query: 225 VNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLI 284
N + S+L+ C+S A+LD GR++H Q++ D +VA+ L+ MY CG + + +
Sbjct: 545 PNRVTYTSILNACSSPAALDWGRRIHQQVIEAGLATDAHVANTLVNMYSMCGSVKDARQV 604
Query: 285 FDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKV 344
FD +DIV +N++I GYA + LG+++LK+F + G+ PD VT + +L+AC+ +G +
Sbjct: 605 FDRMTQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSL 664
Query: 345 KEGREIFE-SMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
+ +EI +K YL + T +V + G DA+ + + M + + I W +++
Sbjct: 665 EWAKEIHSLVLKDGYLSD--TSLGNALVSTYAKCGSFSDALLVFDKM-MKRNVISWNAII 721
Query: 404 GACRTH 409
G C H
Sbjct: 722 GGCAQH 727
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 132/480 (27%), Positives = 235/480 (48%), Gaps = 45/480 (9%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVV----SWTVMLGGFIRDSRID---- 54
ER V SW AMV GYV+ G I EA L +M + + + +L S ++
Sbjct: 206 ERTVHSWNAMVVGYVQYGYIEEALKLLREMQQHGLALGRATTMRLLSSCKSPSALECGRE 265
Query: 55 ------DARRLFDMMPEKDVVAQTNMVLG-YCQDGRVDEGREIFDEMPKKNVISWTTMIS 107
AR LFD V N +L Y + G + E RE+FD+M K+V+SWT +I
Sbjct: 266 IHVEAMKARLLFD-------VNVANCILNMYAKCGSIHEAREVFDKMETKSVVSWTIIIG 318
Query: 108 GYVNNNRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAW------ELFKAMP 157
GY + ++A ++F+ M ++ N +++ +L ++ G W + A
Sbjct: 319 GYADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFS--GPAALKWGKTVHSHILNAGH 376
Query: 158 MKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTL 217
+ +++ + G + R VF+++ +D W+ MI G E +++
Sbjct: 377 ESDLAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGNWEEASEIYHQ 436
Query: 218 MQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGE 277
MQ+EG+ N + + +L+ C + +L GR++H+++V+ F D+ V + LI+MY +CG
Sbjct: 437 MQREGMMPNKITYVILLNACVNPTALHWGREIHSRVVKDGFMFDISVQNALISMYARCGS 496
Query: 278 LVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSA 337
+ +L+F+ KDI+ W ++I G A+ GLG ++L VF +M +G+ P+ VT +L+A
Sbjct: 497 IKDARLLFNKMVRKDIISWTAMIGGLAKSGLGAEALAVFQDMQQAGLKPNRVTYTSILNA 556
Query: 338 CSYTGKVKEGREIFESMKSKYLVEPKTEHYA-CMVDLLGRAGQVEDAMKLIEAMPFEPDA 396
CS + GR I + + L H A +V++ G V+DA ++ + M + D
Sbjct: 557 CSSPAALDWGRRIHQQVIEAGLATDA--HVANTLVNMYSMCGSVKDARQVFDRMT-QRDI 613
Query: 397 IIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGP----YILLSNIYASQGRFHDVAEL 452
+ + +++G H +L + A K +L+ + P YI + N A+ G E+
Sbjct: 614 VAYNAMIGGYAAH---NLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAKEI 670
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 100/356 (28%), Positives = 182/356 (51%), Gaps = 19/356 (5%)
Query: 62 MMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEM--PKKNVISWTTMISGYVNNNRIDVAR 119
++ + V A NM Y Q G ++E R++++++ ++ V SW M+ GYV I+ A
Sbjct: 173 VLDQYTVNALINM---YIQCGSIEEARQVWNKLNHTERTVHSWNAMVVGYVQYGYIEEAL 229
Query: 120 KLFEVMPEKNEVSWTAMLM---------GYTQCGRIQDAWELFKAMPMKSVVASNSMILG 170
KL M + A M +CGR + E KA + V +N ++
Sbjct: 230 KLLREMQQHGLALGRATTMRLLSSCKSPSALECGR-EIHVEAMKARLLFDVNVANCILNM 288
Query: 171 LGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSL 230
+ G + +AR VFD+M K +W+ +I Y G+ ++F MQ+EGV N +
Sbjct: 289 YAKCGSIHEAREVFDKMETKSVVSWTIIIGGYADCGHSEIAFEIFQKMQQEGVVPNRITY 348
Query: 231 ISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFAS 290
I+VL+ + A+L G+ VH+ ++ + D+ V + L+ MY KCG + +F+ +
Sbjct: 349 INVLNAFSGPAALKWGKTVHSHILNAGHESDLAVGTALVKMYAKCGSYKDCRQVFEKLVN 408
Query: 291 KDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREI 350
+D++ WN++I G A+ G E++ +++H+M G+MP+ +T V +L+AC + GREI
Sbjct: 409 RDLIAWNTMIGGLAEGGNWEEASEIYHQMQREGMMPNKITYVILLNACVNPTALHWGREI 468
Query: 351 FES-MKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
+K ++ + ++ ++ + R G ++DA L M D I W +++G
Sbjct: 469 HSRVVKDGFMFDISVQN--ALISMYARCGSIKDARLLFNKM-VRKDIISWTAMIGG 521
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 108/198 (54%), Gaps = 6/198 (3%)
Query: 211 VIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLIT 270
+D+ +Q++G RVN + +L C + L GR+VH +++ +D Y + LI
Sbjct: 125 AMDVVQYLQQQGARVNSCDYMKMLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVNALIN 184
Query: 271 MYIKCGELVKGKLIFD--NFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDD 328
MYI+CG + + + +++ N + + WN+++ GY QYG E++LK+ EM G+
Sbjct: 185 MYIQCGSIEEARQVWNKLNHTERTVHSWNAMVVGYVQYGYIEEALKLLREMQQHGLALGR 244
Query: 329 VTLVGVLSACSYTGKVKEGREIF-ESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLI 387
T + +LS+C ++ GREI E+MK++ L + + C++++ + G + +A ++
Sbjct: 245 ATTMRLLSSCKSPSALECGREIHVEAMKARLLFDVNVAN--CILNMYAKCGSIHEAREVF 302
Query: 388 EAMPFEPDAIIWGSLLGA 405
+ M + + W ++G
Sbjct: 303 DKMETKS-VVSWTIIIGG 319
>gi|296087368|emb|CBI33742.3| unnamed protein product [Vitis vinifera]
Length = 562
Score = 457 bits (1175), Expect = e-126, Method: Compositional matrix adjust.
Identities = 224/492 (45%), Positives = 309/492 (62%), Gaps = 1/492 (0%)
Query: 109 YVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMI 168
Y + R+D + LF + WTA++ G+ G + A +LF MP KS+V+ +M+
Sbjct: 72 YASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGDVVSAQQLFDTMPEKSLVSLTAML 131
Query: 169 LGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFP 228
++GE+ ARV+FD M E+D W+ MI Y + G E + LF M K + N
Sbjct: 132 TCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEV 191
Query: 229 SLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNF 288
+++SVLS C L +L+ GR VH+ + +V+V + L+ MY KCG L +L+FD
Sbjct: 192 TVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKI 251
Query: 289 ASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGR 348
KD+V WNS+I GYA +G +++L++F M G+ P ++T +G+LSAC ++G V EG
Sbjct: 252 DDKDVVAWNSMIVGYAMHGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGW 311
Query: 349 EIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRT 408
+IF MK +Y +EPK EHY CMV+LLGRAG VE A +L++ M EPD ++WG+LLGACR
Sbjct: 312 DIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGACRL 371
Query: 409 HMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCS 468
H K+ L E + L+ N+G YILLSNIYA+ G + VA LR M+ V K PGCS
Sbjct: 372 HGKIALGEKIVELLVDQNLANSGTYILLSNIYAAVGNWDGVARLRTMMKDSGVKKEPGCS 431
Query: 469 WIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHS 528
IEV KVH F ++HP+ I MLE+I G L+ GY P + VLHD+ E EK S
Sbjct: 432 SIEVNNKVHEFLAGG-LNHPKRKEIYMMLEEINGWLKSHGYTPQTDIVLHDIGETEKERS 490
Query: 529 LRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHH 588
L HSEKLA+A+GL+ G I+++KNLRVC DCH KLISK+ GR+I++RD NRFHH
Sbjct: 491 LEVHSEKLAIAFGLINTQPGTTIKIVKNLRVCADCHEVTKLISKITGRKIVVRDRNRFHH 550
Query: 589 FKDGLCSCRDYW 600
F +G CSC DYW
Sbjct: 551 FVNGSCSCGDYW 562
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 74/317 (23%), Positives = 149/317 (47%), Gaps = 15/317 (4%)
Query: 14 RGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTN 73
R Y G + + LF + +V WT ++ G + A++LFD MPEK +V+ T
Sbjct: 70 RSYASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGDVVSAQQLFDTMPEKSLVSLTA 129
Query: 74 MVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVA----RKLFEVMPEKN 129
M+ Y + G +D R +FD M +++ + W MI GY N + A R++ + + N
Sbjct: 130 MLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPN 189
Query: 130 EVSWTAMLMGYTQCGRIQDAWELFKAMPMK----SVVASNSMILGLGQNGEVQKARVVFD 185
EV+ ++L Q G ++ + + +V +++ + G ++ AR+VFD
Sbjct: 190 EVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFD 249
Query: 186 QMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDH 245
++ +KD W+ MI Y G+ E + LF M + G+ + I +LS C +
Sbjct: 250 KIDDKDVVAWNSMIVGYAMHGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTE 309
Query: 246 GRQVHAQLVRCQFDVDVYVA--SVLITMYIKCGELVKGKLIFDNFA-SKDIVMWNSIISG 302
G + ++ + ++ ++ + ++ + + G + + + N D V+W +++
Sbjct: 310 GWDIFNKM-KDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGA 368
Query: 303 ---YAQYGLGEKSLKVF 316
+ + LGEK +++
Sbjct: 369 CRLHGKIALGEKIVELL 385
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/230 (31%), Positives = 117/230 (50%), Gaps = 14/230 (6%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMP 64
+V WTA++ G+ G + A LF MPEK++VS T ML + + +D AR LFD M
Sbjct: 92 SVFFWTAIIHGHALRGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGME 151
Query: 65 EKDVVAQTNMVLGYCQDGRVDEGREIFDEM----PKKNVISWTTMISGYVNNNRIDVARK 120
E+D V M+ GY Q+G +E +F M K N ++ +++S ++ R
Sbjct: 152 ERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRW 211
Query: 121 LFEVMPEKNEVSW-----TAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNG 175
+ + E N + + TA++ Y++CG ++DA +F + K VVA NSMI+G +G
Sbjct: 212 VHSYI-ENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMHG 270
Query: 176 EVQKARVVFDQM----REKDDATWSGMIKVYERKGYELEVIDLFTLMQKE 221
Q+A +F M + T+ G++ G+ E D+F M+ E
Sbjct: 271 FSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIFNKMKDE 320
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 126/258 (48%), Gaps = 17/258 (6%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDA---- 56
MPE+++VS TAM+ Y + G + A LF M E++ V W VM+ G+ ++ ++A
Sbjct: 119 MPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLF 178
Query: 57 RRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKK----NVISWTTMISGYVNN 112
RR+ + + V +++ Q G ++ GR + + NV T ++ Y
Sbjct: 179 RRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKC 238
Query: 113 NRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGL- 171
++ AR +F+ + +K+ V+W +M++GY G Q+A +LFK+M + +N +G+
Sbjct: 239 GSLEDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQEALQLFKSMCRMGLHPTNITFIGIL 298
Query: 172 ---GQNGEVQKARVVFDQMR-----EKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGV 223
G +G V + +F++M+ E + M+ + R G+ + +L M E
Sbjct: 299 SACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPD 358
Query: 224 RVNFPSLISVLSVCASLA 241
V + +L+ + +A
Sbjct: 359 PVLWGTLLGACRLHGKIA 376
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 71/168 (42%), Gaps = 12/168 (7%)
Query: 242 SLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIIS 301
++ H Q+HA L R D + L Y G L +F + + W +II
Sbjct: 42 TISHLLQIHAVLFRHGLDHHPILNFKLQRSYASLGRLDYSVALFGRTQNPSVFFWTAIIH 101
Query: 302 GYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVE 361
G+A G + ++F M + V+L +L+ + G++ R +F+ M+ + V
Sbjct: 102 GHALRGDVVSAQQLFDTMPEKSL----VSLTAMLTCYAKHGELDAARVLFDGMEERDGVC 157
Query: 362 PKTEHYACMVDLLGRAGQVEDAMKLIEAM---PFEPDAIIWGSLLGAC 406
+ M+D + G +A+ L M +P+ + S+L AC
Sbjct: 158 -----WNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSAC 200
>gi|359484341|ref|XP_002280538.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
gi|297738773|emb|CBI28018.3| unnamed protein product [Vitis vinifera]
Length = 695
Score = 457 bits (1175), Expect = e-125, Method: Compositional matrix adjust.
Identities = 239/629 (37%), Positives = 361/629 (57%), Gaps = 45/629 (7%)
Query: 16 YVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMV 75
Y + G +++A LF +M ++V SW ML + + ++D R +FD M D V+ ++
Sbjct: 68 YAKSGNLSDARDLFDKMSRRDVFSWNAMLSAYSKSGNVEDLRAVFDQMSVHDAVSYNTVI 127
Query: 76 LGYCQDGRVDEGREIFDEMPKK-------------------------------------- 97
G+ +G + E F M ++
Sbjct: 128 AGFSGNGCSSQALEFFVRMQEEGFESTDYTHVSVLHACSQLLDIKRGKQIHGRIVATSLG 187
Query: 98 -NVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAM 156
+V W + + Y +D AR LF+ M KN VSW +M+ GY Q G+ + +LF M
Sbjct: 188 ESVFVWNALTNMYAKCGALDQARWLFDRMVNKNVVSWNSMISGYLQNGQPETCTKLFCEM 247
Query: 157 P----MKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVI 212
M V ++++ Q G + +A F +++EKD W+ M+ + G E + +
Sbjct: 248 QSSGLMPDQVTISNILSAYFQCGYIDEACKTFREIKEKDKVCWTTMMVGCAQNGKEEDAL 307
Query: 213 DLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMY 272
LF M E VR + ++ SV+S CA LASL G+ VH + V D D+ V+S L+ MY
Sbjct: 308 LLFREMLLENVRPDNFTISSVVSSCARLASLCQGQAVHGKAVIFGVDHDLLVSSALVDMY 367
Query: 273 IKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLV 332
KCGE ++F +++++ WNS+I GYAQ G ++L ++ EM + PD++T V
Sbjct: 368 SKCGETADAWIVFKRMLTRNVISWNSMILGYAQNGKDLEALALYEEMLHENLKPDNITFV 427
Query: 333 GVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPF 392
GVLSAC + G V+ G+ F S+ + + P +HY+CM++LLGRAG ++ A+ LI++M F
Sbjct: 428 GVLSACMHAGLVERGQGYFYSISKIHGMNPTFDHYSCMINLLGRAGYMDKAVDLIKSMTF 487
Query: 393 EPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAEL 452
EP+ +IW +LL CR + ++ E+AA+ L +L+P NAGPYI+LSNIYA+ GR+ DVA +
Sbjct: 488 EPNCLIWSTLLSVCRINCDVNNGEMAARHLFELDPHNAGPYIMLSNIYAACGRWKDVAAV 547
Query: 453 RKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPD 512
R M+ + K SWIE++ +VH F D +H E I L ++ L+E+G+ PD
Sbjct: 548 RSLMKNNKIKKFAAYSWIEIDNQVHKFVAED-RTHSETEQIYEELNRLIKKLQESGFTPD 606
Query: 513 SSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEG-VPIRVMKNLRVCGDCHSAIKLIS 571
++ VLHDV EEEK S+ YHSEKLA+A+ L+K P G PIR+MKN+RVCGDCH +K +S
Sbjct: 607 TNLVLHDVVEEEKFDSICYHSEKLALAFWLIKKPHGRTPIRIMKNIRVCGDCHVFMKFVS 666
Query: 572 KVMGREIILRDANRFHHFKDGLCSCRDYW 600
K++ R IILRD NRFHHF +G CSC+D W
Sbjct: 667 KIIRRPIILRDINRFHHFIEGRCSCKDSW 695
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 116/387 (29%), Positives = 185/387 (47%), Gaps = 17/387 (4%)
Query: 88 REIFDEMPKK---NVISWTTMISGYVNNNRIDVARKL-----FEVMPEKNEVSWTAMLMG 139
RE D + + N S+T ++ V +N + A++L + + +L
Sbjct: 8 REAIDALYSRGTANSESYTRLLLQCVRSNDVVQAKRLQTHMDLHLYQPTDTFLQNRLLHL 67
Query: 140 YTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMI 199
Y + G + DA +LF M + V + N+M+ ++G V+ R VFDQM D +++ +I
Sbjct: 68 YAKSGNLSDARDLFDKMSRRDVFSWNAMLSAYSKSGNVEDLRAVFDQMSVHDAVSYNTVI 127
Query: 200 KVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFD 259
+ G + ++ F MQ+EG + +SVL C+ L + G+Q+H ++V
Sbjct: 128 AGFSGNGCSSQALEFFVRMQEEGFESTDYTHVSVLHACSQLLDIKRGKQIHGRIVATSLG 187
Query: 260 VDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEM 319
V+V + L MY KCG L + + +FD +K++V WNS+ISGY Q G E K+F EM
Sbjct: 188 ESVFVWNALTNMYAKCGALDQARWLFDRMVNKNVVSWNSMISGYLQNGQPETCTKLFCEM 247
Query: 320 FSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQ 379
SSG+MPD VT+ +LSA G + E + F +K K V T C + G+
Sbjct: 248 QSSGLMPDQVTISNILSAYFQCGYIDEACKTFREIKEKDKVCWTTMMVGC-----AQNGK 302
Query: 380 VEDAMKLIEAMPFE---PDAIIWGSLLGACRTHMKLDLAE-VAAKKLLQLEPKNAGPYIL 435
EDA+ L M E PD S++ +C L + V K ++ +
Sbjct: 303 EEDALLLFREMLLENVRPDNFTISSVVSSCARLASLCQGQAVHGKAVIFGVDHDLLVSSA 362
Query: 436 LSNIYASQGRFHDVAELRKNMRKRNVI 462
L ++Y+ G D + K M RNVI
Sbjct: 363 LVDMYSKCGETADAWIVFKRMLTRNVI 389
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 109/488 (22%), Positives = 201/488 (41%), Gaps = 99/488 (20%)
Query: 22 ITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRL-----FDMMPEKDVVAQTNMVL 76
+ EA + N S+T +L +R + + A+RL + D Q ++
Sbjct: 7 LREAIDALYSRGTANSESYTRLLLQCVRSNDVVQAKRLQTHMDLHLYQPTDTFLQNRLLH 66
Query: 77 GYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAM 136
Y + G + + R++FD+M +++V SW M+S Y + ++ R +F+ M + VS+ +
Sbjct: 67 LYAKSGNLSDARDLFDKMSRRDVFSWNAMLSAYSKSGNVEDLRAVFDQMSVHDAVSYNTV 126
Query: 137 LMGYTQCGRIQDAWELFKAMPMK----------SVVASNSMIL---------------GL 171
+ G++ G A E F M + SV+ + S +L L
Sbjct: 127 IAGFSGNGCSSQALEFFVRMQEEGFESTDYTHVSVLHACSQLLDIKRGKQIHGRIVATSL 186
Query: 172 GQN--------------GEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTL 217
G++ G + +AR +FD+M K+ +W+ MI Y + G LF
Sbjct: 187 GESVFVWNALTNMYAKCGALDQARWLFDRMVNKNVVSWNSMISGYLQNGQPETCTKLFCE 246
Query: 218 MQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGE 277
MQ G+ P +++ S +++ Y +CG
Sbjct: 247 MQSSGL---MPDQVTI--------------------------------SNILSAYFQCGY 271
Query: 278 LVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSA 337
+ + F KD V W +++ G AQ G E +L +F EM V PD+ T+ V+S+
Sbjct: 272 IDEACKTFREIKEKDKVCWTTMMVGCAQNGKEEDALLLFREMLLENVRPDNFTISSVVSS 331
Query: 338 CSY-----TGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPF 392
C+ G+ G+ + + LV + +VD+ + G+ DA + + M
Sbjct: 332 CARLASLCQGQAVHGKAVIFGVDHDLLVS------SALVDMYSKCGETADAWIVFKRM-L 384
Query: 393 EPDAIIWGSL-LGACRTHMKLDLAEVAAKKLLQ-LEPKNAGPYILLSN------IYASQG 444
+ I W S+ LG + L+ + + L + L+P N +LS + QG
Sbjct: 385 TRNVISWNSMILGYAQNGKDLEALALYEEMLHENLKPDNITFVGVLSACMHAGLVERGQG 444
Query: 445 RFHDVAEL 452
F+ ++++
Sbjct: 445 YFYSISKI 452
>gi|359488559|ref|XP_002275581.2| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
mitochondrial-like [Vitis vinifera]
Length = 735
Score = 456 bits (1174), Expect = e-125, Method: Compositional matrix adjust.
Identities = 242/621 (38%), Positives = 369/621 (59%), Gaps = 26/621 (4%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQM------PEKNVVSWTVMLGGFIRD--SRIDDA 56
NV SW +++ G EA F M P ++ + + D S
Sbjct: 116 NVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSGRQAH 175
Query: 57 RRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRID 116
++ E D+ + +V Y + G + + R +FDE+ +N++SWT+MI+GYV N+
Sbjct: 176 QQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQNDDAH 235
Query: 117 VARKLF-EVMPEKNE--------VSWTAMLMGYTQCGRIQDA-------WELFKAMPMKS 160
A LF E + E++ V AM+ + C R+ + L K
Sbjct: 236 RALLLFKEFLVEESGSEGDGEVCVDPIAMVSVLSACSRVSEKSITEGVHGFLIKRGFEGD 295
Query: 161 VVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQK 220
+ N+++ + GE+ +R VFD M E+D +W+ +I VY + G E +++F M K
Sbjct: 296 LGVENTLMDAYAKCGELGVSRRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVK 355
Query: 221 EG-VRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELV 279
+G + N +L +VL CA S G+ +H Q+++ + +V+V + +I MY KCG++
Sbjct: 356 DGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVE 415
Query: 280 KGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACS 339
+ FD K++ W+++++GY +G +++L+VF+EM +GV P+ +T V VL+ACS
Sbjct: 416 MARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACS 475
Query: 340 YTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIW 399
+ G ++EG F++M ++ VEP EHY CMVDLLGRAG +++A LI+ M PD ++W
Sbjct: 476 HAGLLEEGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVW 535
Query: 400 GSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKR 459
G+LLGACR H +DL E++A+KL +L+PKN G Y+LLSNIYA GR+ DV +R M+
Sbjct: 536 GALLGACRMHKNVDLGEISARKLFELDPKNCGYYVLLSNIYADAGRWEDVERMRILMKNS 595
Query: 460 NVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHD 519
++KPPG S ++++ +VH+F D HP+H I LEK+ L+E GY PD + VLHD
Sbjct: 596 GLVKPPGFSLVDIKGRVHVFLVGD-REHPQHEKIYEYLEKLSMKLQEVGYVPDMTSVLHD 654
Query: 520 VDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREII 579
V EEK LR HSEKLAVA+G++ G I ++KNLRVCGDCH+AIK ISK++ REI+
Sbjct: 655 VGHEEKEMVLRVHSEKLAVAFGIMNTVPGTTIHIIKNLRVCGDCHTAIKFISKIVDREIV 714
Query: 580 LRDANRFHHFKDGLCSCRDYW 600
+RD+ RFHHF+DGLCSC DYW
Sbjct: 715 VRDSKRFHHFRDGLCSCGDYW 735
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 109/218 (50%), Gaps = 19/218 (8%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWT-VMLGGFIRDSRIDDARRL 59
M ER+V+SW +++ Y + GM TE+ +F +M + +++ V L + ++RL
Sbjct: 322 MAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRL 381
Query: 60 --------FDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVN 111
M E +V T+++ YC+ G+V+ R+ FD M +KNV SW+ M++GY
Sbjct: 382 GKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGM 441
Query: 112 NNRIDVARKLFEVMP----EKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMK-----SVV 162
+ A ++F M + N +++ ++L + G +++ W FKAM + V
Sbjct: 442 HGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPGVE 501
Query: 163 ASNSMILGLGQNGEVQKARVVFDQMREKDD-ATWSGMI 199
M+ LG+ G +++A + M+ + D W ++
Sbjct: 502 HYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALL 539
>gi|242062548|ref|XP_002452563.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
gi|241932394|gb|EES05539.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
Length = 745
Score = 456 bits (1174), Expect = e-125, Method: Compositional matrix adjust.
Identities = 237/680 (34%), Positives = 387/680 (56%), Gaps = 81/680 (11%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MP N+ ++ A++ ++++ LF M ++++VS+ ++ GF A R++
Sbjct: 67 MPHPNLFTYNALLSTLAHARLLSDMEALFASMTQRDIVSYNAVIAGFSGGGSHAQAVRVY 126
Query: 61 DMMPEKDV------VAQTNMVLG-------------YCQDGR------------------ 83
+ + D + + MV+ +CQ R
Sbjct: 127 LALLQADSSVRPSRITMSTMVMAASALGDRALGKQFHCQILRLGFGANAFVGSPLVDMYA 186
Query: 84 ----VDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMG 139
V + + FDE+ KNV+ + TMI+G + ++ AR+LFEVM +++ ++WT M+ G
Sbjct: 187 KMSLVGDAKRAFDEVDSKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDSITWTTMVTG 246
Query: 140 YTQCGRIQDAWELFKAMPMK----------SVVASNSMILGLGQNGEVQK---------- 179
+TQ G +A E+F+ M + S++ + + L Q ++
Sbjct: 247 FTQNGLESEALEIFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTRYDDN 306
Query: 180 -------------------ARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQK 220
A VF +M K+ +W+ +I Y + G E + +F+ MQ+
Sbjct: 307 VFVGSALVDMYSKCRSIKLAETVFRRMTCKNIISWTALIVGYGQNGCSEEAVRVFSEMQR 366
Query: 221 EGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVK 280
+G+ + +L SV+S CA+LASL+ G Q H + + V++ L+T+Y KCG +
Sbjct: 367 DGIDPDDYTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIED 426
Query: 281 GKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSY 340
+FD + D V W +++SGYAQ+G ++++ +F +M + GV PD VT +GVLSACS
Sbjct: 427 AHRLFDEMSFHDQVSWTALVSGYAQFGRAKETIDLFEKMLAKGVKPDGVTFIGVLSACSR 486
Query: 341 TGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWG 400
G V++GR F SM+ + + P +HY CM+DL R+G++++A + I+ MP PDAI WG
Sbjct: 487 AGFVEKGRSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGKLKEAEEFIKQMPMHPDAIGWG 546
Query: 401 SLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRN 460
+LL ACR +++ + AA+ LL+++P+N Y+LL +++A++G++++VA+LR+ MR R
Sbjct: 547 TLLSACRLRGDMEIGKWAAENLLEIDPQNPASYVLLCSMHAAKGQWNEVAQLRRGMRDRQ 606
Query: 461 VIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDV 520
V K PGCSWI+ + KVH+F+ D SHP I LE + + E GY PD S VLHDV
Sbjct: 607 VKKEPGCSWIKYKNKVHIFSADD-QSHPCSKGIYEKLEWLNSKMLEEGYKPDVSSVLHDV 665
Query: 521 DEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIIL 580
+ +KVH + +HSEKLA+A+GL+ +P+ +PIR++KNLRVC DCH+A K ISK+ GR+I++
Sbjct: 666 ADTDKVHMVSHHSEKLAIAFGLIFVPQEMPIRIVKNLRVCVDCHNATKFISKITGRDILV 725
Query: 581 RDANRFHHFKDGLCSCRDYW 600
RDA RFH F DG+CSC D+W
Sbjct: 726 RDAVRFHKFSDGVCSCGDFW 745
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 102/404 (25%), Positives = 191/404 (47%), Gaps = 74/404 (18%)
Query: 72 TNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEV 131
+++ Y + GR R +FD MP N+ ++ ++S + + LF M +++ V
Sbjct: 45 NHLLTAYGKAGRHARARRVFDAMPHPNLFTYNALLSTLAHARLLSDMEALFASMTQRDIV 104
Query: 132 SWTAMLMGYTQCGRIQDAWELFKAM------------PMKSVVASNSMI----------- 168
S+ A++ G++ G A ++ A+ M ++V + S +
Sbjct: 105 SYNAVIAGFSGGGSHAQAVRVYLALLQADSSVRPSRITMSTMVMAASALGDRALGKQFHC 164
Query: 169 ----LGLGQN-----------------GEVQKA--------------------------- 180
LG G N G+ ++A
Sbjct: 165 QILRLGFGANAFVGSPLVDMYAKMSLVGDAKRAFDEVDSKNVVMYNTMITGLLRCKMVEE 224
Query: 181 -RVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCAS 239
R +F+ M ++D TW+ M+ + + G E E +++F M+ +G+ ++ + S+L+ C +
Sbjct: 225 ARRLFEVMTDRDSITWTTMVTGFTQNGLESEALEIFRRMRFQGIAIDQYTFGSILTACGA 284
Query: 240 LASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSI 299
L++L+ G+Q+HA ++R ++D +V+V S L+ MY KC + + +F K+I+ W ++
Sbjct: 285 LSALEQGKQIHAYIIRTRYDDNVFVGSALVDMYSKCRSIKLAETVFRRMTCKNIISWTAL 344
Query: 300 ISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYL 359
I GY Q G E++++VF EM G+ PDD TL V+S+C+ ++EG + L
Sbjct: 345 IVGYGQNGCSEEAVRVFSEMQRDGIDPDDYTLGSVISSCANLASLEEGAQFHCLALVSGL 404
Query: 360 VEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
+ T A +V L G+ G +EDA +L + M F D + W +L+
Sbjct: 405 MHYITVSNA-LVTLYGKCGSIEDAHRLFDEMSFH-DQVSWTALV 446
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 84/391 (21%), Positives = 157/391 (40%), Gaps = 73/391 (18%)
Query: 136 MLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATW 195
+L Y + GR A +F AMP ++ N+++ L + +F M ++D ++
Sbjct: 47 LLTAYGKAGRHARARRVFDAMPHPNLFTYNALLSTLAHARLLSDMEALFASMTQRDIVSY 106
Query: 196 SGMIKVYERKGYELEVIDLF-TLMQKEG-VRVNFPSLISVLSVCASLASLDHGRQVHAQL 253
+ +I + G + + ++ L+Q + VR + ++ +++ ++L G+Q H Q+
Sbjct: 107 NAVIAGFSGGGSHAQAVRVYLALLQADSSVRPSRITMSTMVMAASALGDRALGKQFHCQI 166
Query: 254 VRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVM------------------ 295
+R F + +V S L+ MY K + K FD SK++VM
Sbjct: 167 LRLGFGANAFVGSPLVDMYAKMSLVGDAKRAFDEVDSKNVVMYNTMITGLLRCKMVEEAR 226
Query: 296 -------------WNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTG 342
W ++++G+ Q GL ++L++F M G+ D T +L+AC
Sbjct: 227 RLFEVMTDRDSITWTTMVTGFTQNGLESEALEIFRRMRFQGIAIDQYTFGSILTACGALS 286
Query: 343 KVKEGREI----------------------FESMKSKYLVEPKTEHYAC--------MVD 372
+++G++I + +S L E C ++
Sbjct: 287 ALEQGKQIHAYIIRTRYDDNVFVGSALVDMYSKCRSIKLAETVFRRMTCKNIISWTALIV 346
Query: 373 LLGRAGQVEDAMKLIEAMP---FEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKN 429
G+ G E+A+++ M +PD GS++ +C L+ E A L L
Sbjct: 347 GYGQNGCSEEAVRVFSEMQRDGIDPDDYTLGSVISSCANLASLE--EGAQFHCLAL-VSG 403
Query: 430 AGPYILLSN----IYASQGRFHDVAELRKNM 456
YI +SN +Y G D L M
Sbjct: 404 LMHYITVSNALVTLYGKCGSIEDAHRLFDEM 434
>gi|168048332|ref|XP_001776621.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672066|gb|EDQ58609.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 703
Score = 456 bits (1174), Expect = e-125, Method: Compositional matrix adjust.
Identities = 249/647 (38%), Positives = 362/647 (55%), Gaps = 52/647 (8%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDM 62
E+N ++ Y+E G + EA +F + +K+ SW M+ G++ +DA RLF
Sbjct: 60 EQNAHVMNNLLHVYIECGRLQEARCVFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFRE 119
Query: 63 MP---------------------------------------EKDVVAQTNMVLGYCQDGR 83
M E DV T ++ Y + G
Sbjct: 120 MCHEGVQPNAGTYMIILKACASLSALKWGKEVHACIRHGGLESDVRVGTALLRMYGKCGS 179
Query: 84 VDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEK----NEVSWTAMLMG 139
++E R IFD + ++ISWT MI Y + A +L M ++ N +++ ++L
Sbjct: 180 INEARRIFDNLMNHDIISWTVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNA 239
Query: 140 YTQCGRIQDAW------ELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDA 193
G ++ W A V +++ ++G + ARVVFD+M+ +D
Sbjct: 240 CASEGALK--WVKRVHRHALDAGLELDVRVGTALVQMYAKSGSIDDARVVFDRMKVRDVV 297
Query: 194 TWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQL 253
+W+ MI + G E DLF MQ EG + + +S+L+ CAS +L+ +++H
Sbjct: 298 SWNVMIGAFAEHGRGHEAYDLFLQMQTEGCKPDAIMFLSILNACASAGALEWVKKIHRHA 357
Query: 254 VRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSL 313
+ +VDV V + L+ MY K G + +++FD +++V WN++ISG AQ+GLG+ +L
Sbjct: 358 LDSGLEVDVRVGTALVHMYSKSGSIDDARVVFDRMKVRNVVSWNAMISGLAQHGLGQDAL 417
Query: 314 KVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDL 373
+VF M + GV PD VT V VLSACS+ G V EGR + +M Y +EP H CMVDL
Sbjct: 418 EVFRRMTAHGVKPDRVTFVAVLSACSHAGLVDEGRSQYLAMTQVYGIEPDVSHCNCMVDL 477
Query: 374 LGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPY 433
LGRAG++ +A I+ M +PD WG+LLG+CRT+ ++L E+ AK+ L+L+PKNA Y
Sbjct: 478 LGRAGRLMEAKLFIDNMAVDPDEATWGALLGSCRTYGNVELGELVAKERLKLDPKNAATY 537
Query: 434 ILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMI 493
+LLSNIYA G++ V+ +R MR+R + K PG SWIEV+ K+H F D SHPE I
Sbjct: 538 VLLSNIYAEAGKWDMVSWVRTMMRERGIRKEPGRSWIEVDNKIHDFLVADS-SHPECKEI 596
Query: 494 MRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRV 553
+K+ ++ GY PD+ VL + + ++K + HSEKLA+ YGL+ P G PIRV
Sbjct: 597 NESKDKVIEKIKAEGYIPDTRLVLKNKNMKDKELDICSHSEKLAIVYGLMHTPPGNPIRV 656
Query: 554 MKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
KNLRVC DCH A KLISKV GREII+RDANRFHHFKDG+CSC DYW
Sbjct: 657 FKNLRVCTDCHGATKLISKVEGREIIVRDANRFHHFKDGVCSCGDYW 703
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 113/218 (51%), Gaps = 9/218 (4%)
Query: 231 ISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFAS 290
+ VL C L +QVH +++ + + + +V + L+ +YI+CG L + + +FD
Sbjct: 32 VEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVMNNLLHVYIECGRLQEARCVFDALVK 91
Query: 291 KDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREI 350
K WN++I+GY ++ E ++++F EM GV P+ T + +L AC+ +K G+E+
Sbjct: 92 KSGASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQPNAGTYMIILKACASLSALKWGKEV 151
Query: 351 FESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHM 410
++ L E ++ + G+ G + +A ++ + + D I W ++GA +
Sbjct: 152 HACIRHGGL-ESDVRVGTALLRMYGKCGSINEARRIFDNL-MNHDIISWTVMIGA---YA 206
Query: 411 KLDLAEVAAKKLLQLEPK----NAGPYILLSNIYASQG 444
+ + A + +LQ+E + NA Y+ + N AS+G
Sbjct: 207 QSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACASEG 244
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 110/244 (45%), Gaps = 22/244 (9%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDA---- 56
M R+VVSW M+ + E G EA LF QM + +M + A
Sbjct: 291 MKVRDVVSWNVMIGAFAEHGRGHEAYDLFLQMQTEGCKPDAIMFLSILNACASAGALEWV 350
Query: 57 ----RRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
R D E DV T +V Y + G +D+ R +FD M +NV+SW MISG +
Sbjct: 351 KKIHRHALDSGLEVDVRVGTALVHMYSKSGSIDDARVVFDRMKVRNVVSWNAMISGLAQH 410
Query: 113 ----NRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPM-----KSVVA 163
+ ++V R++ + + V++ A+L + G + + + AM V
Sbjct: 411 GLGQDALEVFRRMTAHGVKPDRVTFVAVLSACSHAGLVDEGRSQYLAMTQVYGIEPDVSH 470
Query: 164 SNSMILGLGQNGEVQKARVVFDQMR-EKDDATWSGMIKVYERKGYELEVIDLFTLMQKEG 222
N M+ LG+ G + +A++ D M + D+ATW ++ G ++L L+ KE
Sbjct: 471 CNCMVDLLGRAGRLMEAKLFIDNMAVDPDEATWGALLGSCRTYGN----VELGELVAKER 526
Query: 223 VRVN 226
++++
Sbjct: 527 LKLD 530
>gi|225442904|ref|XP_002264123.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930 [Vitis vinifera]
Length = 724
Score = 456 bits (1174), Expect = e-125, Method: Compositional matrix adjust.
Identities = 239/647 (36%), Positives = 369/647 (57%), Gaps = 48/647 (7%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVV----SWTVMLGGFIRDSRIDDA 56
MP N W M++GY G A +++ +M E+ V+ ++ +L F RD+ +
Sbjct: 79 MPGPNHFVWNNMIKGYSRVGCPNSAVSMYCEMLERGVMPDEYTYPFLLKRFTRDTAVKCG 138
Query: 57 RRLFDMMPE----KDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
R L D + + +V Q ++ Y G V R +FD K +V++W MISGY +
Sbjct: 139 RELHDHIVKLGFSSNVFVQNALIHLYSLSGEVSVARGVFDRSSKGDVVTWNVMISGYNRS 198
Query: 113 NRIDVARKLFE------VMP---------------------------------EKNEVSW 133
+ D + KLF+ V+P E V
Sbjct: 199 KQFDESMKLFDEMERMRVLPSSITLVSVLSACSKLKDLNVGKRVHRYVKDLKIEPVRVLE 258
Query: 134 TAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDA 193
A++ Y CG + A +F M + V++ +++ G G+V AR FD+M E+D
Sbjct: 259 NALIDMYAACGDMDTALGIFDNMKSRDVISWTAIVTGFTNLGQVGLARNYFDKMPERDFV 318
Query: 194 TWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQL 253
+W+ MI Y + EV+ LF MQ ++ + +++S+L+ CA L +L+ G + A +
Sbjct: 319 SWTAMIDGYLQVNRFKEVLSLFREMQAANIKPDEFTMVSILTACAHLGALELGEWIKAYI 378
Query: 254 VRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSL 313
+ + +D +V + LI MY CG + K IF+ +D + W ++I G A G GE++L
Sbjct: 379 DKNEIKIDSFVGNALIDMYFNCGNVEKAIRIFNAMPHRDKISWTAVIFGLAINGYGEEAL 438
Query: 314 KVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDL 373
+F +M + + PD+VT +GVL AC+++G V +G++ F M +++ +EP HY CMVDL
Sbjct: 439 DMFSQMLKASITPDEVTCIGVLCACTHSGMVDKGKKFFARMTTQHGIEPNVAHYGCMVDL 498
Query: 374 LGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPY 433
LGRAG +++A ++I+ MP +P++I+WGSLLGACR H ++AE+AA+++L+LEP+N Y
Sbjct: 499 LGRAGHLKEAHEVIKNMPVKPNSIVWGSLLGACRVHRDEEMAEMAAQQILELEPENGAVY 558
Query: 434 ILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMI 493
+LL NIYA+ R+ + E+RK M R + K PGCS IE+ VH F D V HP+ I
Sbjct: 559 VLLCNIYAACNRWEKLHEVRKLMMDRGIKKTPGCSLIEMNGSVHEFVAGDQV-HPQSKEI 617
Query: 494 MRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRV 553
L+++ L+ AGY PD+S V D+ EEEK ++ HSEKLA+A+GL+ GV IR+
Sbjct: 618 YSKLDEMSVDLKFAGYSPDTSEVFLDIGEEEKESAVYRHSEKLAIAFGLISSGPGVTIRI 677
Query: 554 MKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
+KNLR+C DCH KL+SKV RE+I+RD RFHHF+ G CSC+DYW
Sbjct: 678 VKNLRMCVDCHYVAKLVSKVYNREVIVRDRTRFHHFRHGSCSCKDYW 724
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 105/377 (27%), Positives = 182/377 (48%), Gaps = 56/377 (14%)
Query: 75 VLGYC---QDGRVDEGREIFDEMPKKNVISWTTMISGYVN----NNRIDVARKLFE--VM 125
++ +C + G ++ R +FD MP N W MI GY N+ + + ++ E VM
Sbjct: 57 IIAFCCKHELGDMEYARMVFDTMPGPNHFVWNNMIKGYSRVGCPNSAVSMYCEMLERGVM 116
Query: 126 PEKNEVSWTAMLMGYT-----QCGR-IQDAWELFKAMPMKSVVASNSMILGLGQNGEVQK 179
P+ E ++ +L +T +CGR + D + K +V N++I +GEV
Sbjct: 117 PD--EYTYPFLLKRFTRDTAVKCGRELHD--HIVKLGFSSNVFVQNALIHLYSLSGEVSV 172
Query: 180 ARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCAS 239
AR VFD+ + D TW+ MI Y R E + LF M++ V + +L+SVLS C+
Sbjct: 173 ARGVFDRSSKGDVVTWNVMISGYNRSKQFDESMKLFDEMERMRVLPSSITLVSVLSACSK 232
Query: 240 LASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSI 299
L L+ G++VH + + + + + LI MY CG++ IFDN S+D++ W +I
Sbjct: 233 LKDLNVGKRVHRYVKDLKIEPVRVLENALIDMYAACGDMDTALGIFDNMKSRDVISWTAI 292
Query: 300 ISGYA---QYGLG----------------------------EKSLKVFHEMFSSGVMPDD 328
++G+ Q GL ++ L +F EM ++ + PD+
Sbjct: 293 VTGFTNLGQVGLARNYFDKMPERDFVSWTAMIDGYLQVNRFKEVLSLFREMQAANIKPDE 352
Query: 329 VTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYA--CMVDLLGRAGQVEDAMKL 386
T+V +L+AC++ G ++ G I + E K + + ++D+ G VE A+++
Sbjct: 353 FTMVSILTACAHLGALELGEWIKAYIDKN---EIKIDSFVGNALIDMYFNCGNVEKAIRI 409
Query: 387 IEAMPFEPDAIIWGSLL 403
AMP D I W +++
Sbjct: 410 FNAMPHR-DKISWTAVI 425
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 144/290 (49%), Gaps = 6/290 (2%)
Query: 175 GEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVL 234
G+++ AR+VFD M + W+ MIK Y R G + ++ M + GV + + +L
Sbjct: 67 GDMEYARMVFDTMPGPNHFVWNNMIKGYSRVGCPNSAVSMYCEMLERGVMPDEYTYPFLL 126
Query: 235 SVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIV 294
++ GR++H +V+ F +V+V + LI +Y GE+ + +FD + D+V
Sbjct: 127 KRFTRDTAVKCGRELHDHIVKLGFSSNVFVQNALIHLYSLSGEVSVARGVFDRSSKGDVV 186
Query: 295 MWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESM 354
WN +ISGY + ++S+K+F EM V+P +TLV VLSACS + G+ + +
Sbjct: 187 TWNVMISGYNRSKQFDESMKLFDEMERMRVLPSSITLVSVLSACSKLKDLNVGKRVHRYV 246
Query: 355 KSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDL 414
K +EP ++D+ G ++ A+ + + M D I W +++ ++ L
Sbjct: 247 KD-LKIEPVRVLENALIDMYAACGDMDTALGIFDNMK-SRDVISWTAIVTGFTNLGQVGL 304
Query: 415 AEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKP 464
A K+ + ++ + + + Y RF +V L + M+ N IKP
Sbjct: 305 ARNYFDKMPE---RDFVSWTAMIDGYLQVNRFKEVLSLFREMQAAN-IKP 350
>gi|414873128|tpg|DAA51685.1| TPA: hypothetical protein ZEAMMB73_445170 [Zea mays]
Length = 987
Score = 456 bits (1174), Expect = e-125, Method: Compositional matrix adjust.
Identities = 256/710 (36%), Positives = 382/710 (53%), Gaps = 114/710 (16%)
Query: 4 RNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF-DM 62
RN +W +++ Y + G + +A +F +MP+++ VSWT+M+ G R R DA + F DM
Sbjct: 279 RNAFTWNSLLSLYAKSGRLPDAHVVFAEMPDRDAVSWTIMIVGLNRSGRFWDAVKTFLDM 338
Query: 63 MPEKDVVAQ---TNMV---------------------LG--------------YCQDGRV 84
+ E +Q TN++ LG Y + G
Sbjct: 339 VSEGFAPSQFTLTNVLSSCAAMEACGVGRKVHPFVVKLGLSSCVPVANSVLYMYGKCGDA 398
Query: 85 DEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCG 144
+ R +F+ M ++V SW M+S Y + R+++A +FE M E++ VSW ++ GY Q G
Sbjct: 399 ETARAVFERMQVRSVSSWNVMVSLYTHQGRMELAVSMFENMVERSIVSWNTIIAGYNQNG 458
Query: 145 RIQDAWELFK-----------AMPMKSVVAS----------------------------- 164
A + F A + SV+++
Sbjct: 459 LDGMALKFFSRMLSASSMEPDAFTVTSVLSACANLRMLKMGKQMHSYILRTGMPCSSQIM 518
Query: 165 NSMILGLGQNGEVQKARVVFDQ---------------------------------MREKD 191
N++I ++G V+ AR + DQ M +D
Sbjct: 519 NALISTYAKSGSVETARRIMDQAVVADLNVISFTALLEGYVKLGDTKQAREIFDIMNNRD 578
Query: 192 DATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHA 251
W+ MI Y + G E ++LF M G N +L +VLS CASLA LD+G+Q+H
Sbjct: 579 VIAWTAMIVGYHQNGQNDEAMELFRSMILIGPEPNSHTLAAVLSACASLAYLDYGKQIHC 638
Query: 252 QLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFA-SKDIVMWNSIISGYAQYGLGE 310
+ +R + V V++ +IT+Y + G + + +FD K+ + W S+I AQ+GLGE
Sbjct: 639 KAIRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETITWTSMIVAMAQHGLGE 698
Query: 311 KSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACM 370
+++ +F EM GV PD +T VGVLSAC++ G V +G+ +E M++++ + P+ HYACM
Sbjct: 699 QAVVLFEEMVRVGVKPDHITYVGVLSACAHAGFVDKGKRYYEQMQNEHGIVPQMSHYACM 758
Query: 371 VDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNA 430
VDL RAG + +A + I+ MP PD ++WGSLL ACR DLAE+AA KLL ++P N+
Sbjct: 759 VDLHARAGLLTEAHEFIQRMPVAPDTVVWGSLLAACRVRKNADLAELAAGKLLSIDPHNS 818
Query: 431 GPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEH 490
G Y L+N+Y++ GR++D A + K + + V K G SW V KVH+F G D V HP+
Sbjct: 819 GAYSALANVYSACGRWNDAARIWKLRKDKGVKKETGFSWTHVRGKVHVF-GADDVLHPQR 877
Query: 491 PMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVP 550
I R ++ +++AG+ PD + VLHDVD+E K L HSEKLA+A+GL+ PE
Sbjct: 878 DSIYRKAAEMWEEIKKAGFVPDLNSVLHDVDDELKEELLSRHSEKLAIAFGLISTPEKTT 937
Query: 551 IRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
+R+MKNLRVC DCH+AIK ISK + REII+RDA RFHHF+DG CSC+DYW
Sbjct: 938 LRIMKNLRVCNDCHTAIKFISKFVDREIIVRDATRFHHFRDGYCSCKDYW 987
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 100/435 (22%), Positives = 189/435 (43%), Gaps = 109/435 (25%)
Query: 82 GRVDEGREIFDEMP--KKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMG 139
G E R +FD++P ++N +W +++S Y + R+ A +F MP+++ VSWT M++G
Sbjct: 262 GCFREARCLFDDIPYARRNAFTWNSLLSLYAKSGRLPDAHVVFAEMPDRDAVSWTIMIVG 321
Query: 140 YTQCGRIQDAWELF--------------------------------KAMPM-------KS 160
+ GR DA + F K P
Sbjct: 322 LNRSGRFWDAVKTFLDMVSEGFAPSQFTLTNVLSSCAAMEACGVGRKVHPFVVKLGLSSC 381
Query: 161 VVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQK 220
V +NS++ G+ G+ + AR VF++M+ + ++W+ M+ +Y +G + +F M +
Sbjct: 382 VPVANSVLYMYGKCGDAETARAVFERMQVRSVSSWNVMVSLYTHQGRMELAVSMFENMVE 441
Query: 221 ------------------EGVRVNFPS--------------LISVLSVCASLASLDHGRQ 248
+G+ + F S + SVLS CA+L L G+Q
Sbjct: 442 RSIVSWNTIIAGYNQNGLDGMALKFFSRMLSASSMEPDAFTVTSVLSACANLRMLKMGKQ 501
Query: 249 VHAQLVRCQF---------------------------------DVDVYVASVLITMYIKC 275
+H+ ++R D++V + L+ Y+K
Sbjct: 502 MHSYILRTGMPCSSQIMNALISTYAKSGSVETARRIMDQAVVADLNVISFTALLEGYVKL 561
Query: 276 GELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVL 335
G+ + + IFD ++D++ W ++I GY Q G ++++++F M G P+ TL VL
Sbjct: 562 GDTKQAREIFDIMNNRDVIAWTAMIVGYHQNGQNDEAMELFRSMILIGPEPNSHTLAAVL 621
Query: 336 SACSYTGKVKEGREIF-ESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEP 394
SAC+ + G++I ++++S L E ++ + R+G V A ++ + + +
Sbjct: 622 SACASLAYLDYGKQIHCKAIRS--LQEQSVSVSNAIITVYARSGSVPLARRVFDQICWRK 679
Query: 395 DAIIWGSLLGACRTH 409
+ I W S++ A H
Sbjct: 680 ETITWTSMIVAMAQH 694
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 93/386 (24%), Positives = 166/386 (43%), Gaps = 84/386 (21%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
M R+V SW MV Y +G + A ++F M E+++VSW ++ G+ ++ A + F
Sbjct: 408 MQVRSVSSWNVMVSLYTHQGRMELAVSMFENMVERSIVSWNTIIAGYNQNGLDGMALKFF 467
Query: 61 DMMP-----EKDVVAQTN-----------------------------------MVLGYCQ 80
M E D T+ ++ Y +
Sbjct: 468 SRMLSASSMEPDAFTVTSVLSACANLRMLKMGKQMHSYILRTGMPCSSQIMNALISTYAK 527
Query: 81 DGRVDEGREIFDE--MPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLM 138
G V+ R I D+ + NVIS+T ++ GYV AR++F++M ++ ++WTAM++
Sbjct: 528 SGSVETARRIMDQAVVADLNVISFTALLEGYVKLGDTKQAREIFDIMNNRDVIAWTAMIV 587
Query: 139 GYTQCGRIQDAWELFKAMPM---------------------------------------K 159
GY Q G+ +A ELF++M + +
Sbjct: 588 GYHQNGQNDEAMELFRSMILIGPEPNSHTLAAVLSACASLAYLDYGKQIHCKAIRSLQEQ 647
Query: 160 SVVASNSMILGLGQNGEVQKARVVFDQM-REKDDATWSGMIKVYERKGYELEVIDLFTLM 218
SV SN++I ++G V AR VFDQ+ K+ TW+ MI + G + + LF M
Sbjct: 648 SVSVSNAIITVYARSGSVPLARRVFDQICWRKETITWTSMIVAMAQHGLGEQAVVLFEEM 707
Query: 219 QKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDV-DVYVASVLITMYIKCGE 277
+ GV+ + + + VLS CA +D G++ + Q+ V + + ++ ++ + G
Sbjct: 708 VRVGVKPDHITYVGVLSACAHAGFVDKGKRYYEQMQNEHGIVPQMSHYACMVDLHARAGL 767
Query: 278 LVKGKLIFDNF-ASKDIVMWNSIISG 302
L + + D V+W S+++
Sbjct: 768 LTEAHEFIQRMPVAPDTVVWGSLLAA 793
>gi|297741829|emb|CBI33142.3| unnamed protein product [Vitis vinifera]
Length = 1198
Score = 456 bits (1173), Expect = e-125, Method: Compositional matrix adjust.
Identities = 214/489 (43%), Positives = 318/489 (65%), Gaps = 1/489 (0%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MP R+ VSW +++ GY + G E+ LF MP KNVVSW M+ G I D RID+A + F
Sbjct: 1 MPHRDTVSWNSIITGYWKNGCFDESKRLFGLMPTKNVVSWNSMIAGCIEDERIDEAWQYF 60
Query: 61 DMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARK 120
MP+++ + M+ G + RV+E +F+EMP++NVIS+T M+ GY I+ AR
Sbjct: 61 QAMPQRNTASWNAMISGLVRYDRVEEASRLFEEMPRRNVISYTAMVDGYAKIGEIEQARA 120
Query: 121 LFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKA 180
LF MP+KN VSWT M+ GY + G+ +A LF+ MP K++VA +MI G + G+ KA
Sbjct: 121 LFNCMPQKNVVSWTVMISGYVENGKFDEAENLFEQMPDKNIVAMTAMITGYCKEGKTDKA 180
Query: 181 RVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASL 240
+++FDQ+ +D A+W+ MI Y + G E + L + M K G++ + +LISVL+ C+SL
Sbjct: 181 KILFDQIPCRDLASWNAMITGYAQNGSGEEALKLHSQMLKMGMQPDHSTLISVLTACSSL 240
Query: 241 ASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSII 300
ASL GR+ H +++ ++ + + + LITMY KCG ++ +L F D+V WN++I
Sbjct: 241 ASLQEGRKTHVLVLKSGYESRISICNALITMYCKCGSILDSELAFRQIDHPDVVSWNAMI 300
Query: 301 SGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLV 360
+ +A++G +++L F EM S+ V PD +T + +LSAC + GKV E F SM Y +
Sbjct: 301 AAFARHGFYDRALASFGEMRSNRVEPDGITFLSLLSACGHAGKVHESLNWFNSMIESYKI 360
Query: 361 EPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAK 420
P+ EH+AC+VD+L R GQVE A K+I+ MPFE D IWG+LL AC H+ + L E+AAK
Sbjct: 361 VPRPEHFACLVDILSRGGQVEKAYKIIQEMPFEADCGIWGALLAACHVHLNVKLGELAAK 420
Query: 421 KLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFT 480
K+++LEP+N+G Y++LSNIYA+ G + +V +R MR++ V K P SW+E++ KVH F
Sbjct: 421 KIVELEPQNSGAYVVLSNIYAAAGMWGEVTRVRGLMREQGVKKQPAYSWMEIDNKVHFFL 480
Query: 481 GRDCVSHPE 489
G D SHPE
Sbjct: 481 GDD-ASHPE 488
>gi|449467092|ref|XP_004151259.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Cucumis sativus]
Length = 849
Score = 456 bits (1173), Expect = e-125, Method: Compositional matrix adjust.
Identities = 237/624 (37%), Positives = 372/624 (59%), Gaps = 29/624 (4%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM------PEKNVVSWTV---------MLG 45
MPERN V+WT M+ ++ G EA LF +M P++ +S + +LG
Sbjct: 231 MPERNAVTWTLMITRLMQFGYAGEAIDLFLEMILSGYEPDRFTLSGVISACANMELLLLG 290
Query: 46 GFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTM 105
+ I L + NM DG + R+IFD++ NV SWT M
Sbjct: 291 QQLHSQAIRHGLTLDRCVG----CCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAM 346
Query: 106 ISGYV-----NNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFK---AMP 157
I+GYV + +D+ R + N ++++ L ++ ++F +
Sbjct: 347 ITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLG 406
Query: 158 MKSV-VASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFT 216
SV +NS+I ++G + AR FD + EK+ +++ +I Y + E ++LF
Sbjct: 407 FSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELFN 466
Query: 217 LMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCG 276
++ +G+ + + S+LS AS+ ++ G Q+HA++++ ++ V + LI+MY +CG
Sbjct: 467 EIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCNALISMYSRCG 526
Query: 277 ELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLS 336
+ +F++ ++++ W SII+G+A++G ++L++FH+M GV P+ VT + VLS
Sbjct: 527 NIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHKMLEEGVRPNLVTYIAVLS 586
Query: 337 ACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDA 396
ACS+ G V EG + F+SM +++ V P+ EHYACMVD+LGR+G + +A++ I +MP++ DA
Sbjct: 587 ACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACMVDILGRSGSLSEAIQFINSMPYKADA 646
Query: 397 IIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNM 456
++W + LGACR H L+L + AAK +++ EP + YILLSN+YAS ++ +V+ +RK M
Sbjct: 647 LVWRTFLGACRVHGNLELGKHAAKMIIEQEPHDPAAYILLSNLYASTSKWDEVSNIRKAM 706
Query: 457 RKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFV 516
+++N+IK GCSW+EVE KVH F D SHP+ I L+ + +++ GY P+ FV
Sbjct: 707 KEKNLIKEAGCSWVEVENKVHKFYVGD-TSHPKAAEIYDELQNLSVKIKKLGYVPNLDFV 765
Query: 517 LHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGR 576
LHDV+EE+K L HSEK+AVA+GL+ + PIRV KNLR+CGDCHSAIK IS GR
Sbjct: 766 LHDVEEEQKEKLLFQHSEKIAVAFGLISTSKMKPIRVFKNLRICGDCHSAIKYISMATGR 825
Query: 577 EIILRDANRFHHFKDGLCSCRDYW 600
EII+RDANRFHH KDG CSC +YW
Sbjct: 826 EIIVRDANRFHHIKDGRCSCNEYW 849
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 102/399 (25%), Positives = 187/399 (46%), Gaps = 31/399 (7%)
Query: 31 QMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDV----VAQTNMVLGYCQDGRVDE 86
Q ++ ++++ L IR D + + + + D+ V +++ Y + G+ ++
Sbjct: 60 QGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTLNSLISLYSKCGQWEK 119
Query: 87 GREIFDEM-PKKNVISWTTMISGYVNNNRIDVARKLFEVMPEK----NEVSWTAMLMGYT 141
IF M +++ISW+ M+S + NNN A F M E NE + A +
Sbjct: 120 ATSIFQLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENGYYPNEYCFAAATRACS 179
Query: 142 QCGRIQDAWELFKAMPMKSVVASNSMILGLG-------QNGEVQKARVVFDQMREKDDAT 194
+ +F +K+ + + +G G G++ A VF++M E++ T
Sbjct: 180 TAEFVSVGDSIF-GFVVKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVT 238
Query: 195 WSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLV 254
W+ MI + GY E IDLF M G + +L V+S CA++ L G+Q+H+Q +
Sbjct: 239 WTLMITRLMQFGYAGEAIDLFLEMILSGYEPDRFTLSGVISACANMELLLLGQQLHSQAI 298
Query: 255 RCQFDVDVYVASVLITMYIKC---GELVKGKLIFDNFASKDIVMWNSIISGYAQY-GLGE 310
R +D V LI MY KC G + + IFD ++ W ++I+GY Q G E
Sbjct: 299 RHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDE 358
Query: 311 KSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYAC- 369
++L +F M + V+P+ T L AC+ ++ G ++F + V+ C
Sbjct: 359 EALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVF-----THAVKLGFSSVNCV 413
Query: 370 ---MVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
++ + R+G+++DA K + + FE + I + +++ A
Sbjct: 414 ANSLISMYARSGRIDDARKAFDIL-FEKNLISYNTVIDA 451
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 90/194 (46%), Gaps = 7/194 (3%)
Query: 210 EVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLI 269
+ I M +G + + L C S D G VH +L + +D + LI
Sbjct: 49 KAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTLNSLI 108
Query: 270 TMYIKCGELVKGKLIFDNF-ASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDD 328
++Y KCG+ K IF +S+D++ W++++S +A +G ++L F +M +G P++
Sbjct: 109 SLYSKCGQWEKATSIFQLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENGYYPNE 168
Query: 329 VTLVGVLSACSYTGKVKEGREIFE-SMKSKYLVEPKTEHYAC-MVDLLGRA-GQVEDAMK 385
ACS V G IF +K+ YL C ++D+ + G + A K
Sbjct: 169 YCFAAATRACSTAEFVSVGDSIFGFVVKTGYLQSDVC--VGCGLIDMFVKGRGDLVSAFK 226
Query: 386 LIEAMPFEPDAIIW 399
+ E MP E +A+ W
Sbjct: 227 VFEKMP-ERNAVTW 239
>gi|225445812|ref|XP_002275298.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30700
[Vitis vinifera]
Length = 781
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 242/639 (37%), Positives = 369/639 (57%), Gaps = 50/639 (7%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDV- 68
+A+V Y + + A +F M E++ V W M+ G +++S D+A +F M + +
Sbjct: 145 SAIVACYFKFSRVAAARKVFDGMLERDTVLWNTMVSGLVKNSCFDEAILIFGDMVKGGIG 204
Query: 69 ------------VAQ--------------------------TNMVLGYCQDGRVDEGREI 90
VA+ T + Y + G ++ R +
Sbjct: 205 FDSTTVAAVLPGVAELQDLALGMGIQCLAMKVGFHSHAYVITGLACLYSKCGEIETARLL 264
Query: 91 FDEMPKKNVISWTTMISGYVNNNRIDVARKLF-EVMPEKNEVSWTAML--------MGYT 141
F ++ + +++S+ MISGY NN + + +LF E++ +V+ ++++ G+
Sbjct: 265 FGQIGQPDLVSYNAMISGYTCNNETESSVRLFKELLVSGEKVNSSSIVGLIPVFFPFGHL 324
Query: 142 QCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKV 201
R + K+ + + S ++ + E++ AR++FD+ EK A+W+ MI
Sbjct: 325 HLTRCIHGF-CTKSGVVSNSSVSTALTTVYSRLNEIESARLLFDESSEKSLASWNAMISG 383
Query: 202 YERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVD 261
Y + G + I LF MQK VR N ++ S+LS CA L +L G+ VH + R F+ +
Sbjct: 384 YAQNGLTEKAISLFQEMQKCEVRPNPVTVTSILSACAQLGALSLGKWVHDLINRESFESN 443
Query: 262 VYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFS 321
++V++ LI MY KCG + + + +F K+ V WN++ISGY +G G ++L +F+EM
Sbjct: 444 IFVSTALIDMYAKCGSITEAQRLFSMMPEKNAVTWNAMISGYGLHGYGHEALNLFNEMLH 503
Query: 322 SGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVE 381
S V P VT + VL ACS+ G V+EG EIF SM + EP EHYACMVDLLGRAG ++
Sbjct: 504 SRVSPTGVTFLSVLYACSHAGLVREGDEIFRSMVHDHGFEPLPEHYACMVDLLGRAGNLD 563
Query: 382 DAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYA 441
A+ I MP EP +WG+LLGAC H +LA +A+ KL +L+P+N G Y+LLSNIY+
Sbjct: 564 KALDFIRKMPVEPGPPVWGALLGACMIHKDANLARLASDKLFELDPQNVGYYVLLSNIYS 623
Query: 442 SQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIG 501
+ + + A +R +++R + K PGC+ IEV +H+FT D SHP+ I MLEK+
Sbjct: 624 AGQNYPEAASVRGVVKRRKLAKTPGCTLIEVANTLHIFTSGD-QSHPQATAIYAMLEKLT 682
Query: 502 GLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCG 561
G +REAG+ ++ LHDV+EEEK ++ HSEKLA+A+GL+ G IR++KNLRVC
Sbjct: 683 GKMREAGFQTETGTALHDVEEEEKELMVKVHSEKLAIAFGLITSEPGTEIRIIKNLRVCL 742
Query: 562 DCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
DCH+A K ISK+ R I++RDANRFHHFKDG+CSC DYW
Sbjct: 743 DCHNATKFISKITERVIVVRDANRFHHFKDGICSCGDYW 781
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 95/445 (21%), Positives = 171/445 (38%), Gaps = 54/445 (12%)
Query: 65 EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVA------ 118
D+V T + +D+ +F +P ++ + +I + NN A
Sbjct: 39 HNDLVTVTKLTHKLSHLKAIDQASLLFSTIPNPDLFLYNVLIRAFSLNNSPSSAVSLYTH 98
Query: 119 -RKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEV 177
RK + P+ ++ G + A + V S +++ + V
Sbjct: 99 LRKSTPLEPDNFTYAFVISGASSLGLGLLLHAHSIVAGFGSDLFVGS-AIVACYFKFSRV 157
Query: 178 QKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVC 237
AR VFD M E+D W+ M+ + E I +F M K G+ + ++ +VL
Sbjct: 158 AAARKVFDGMLERDTVLWNTMVSGLVKNSCFDEAILIFGDMVKGGIGFDSTTVAAVLPGV 217
Query: 238 ASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWN 297
A L L G + ++ F YV + L +Y KCGE+ +L+F D+V +N
Sbjct: 218 AELQDLALGMGIQCLAMKVGFHSHAYVITGLACLYSKCGEIETARLLFGQIGQPDLVSYN 277
Query: 298 SIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGV-----------LSAC-------- 338
++ISGY E S+++F E+ SG + ++VG+ L+ C
Sbjct: 278 AMISGYTCNNETESSVRLFKELLVSGEKVNSSSIVGLIPVFFPFGHLHLTRCIHGFCTKS 337
Query: 339 ----------------SYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVED 382
S +++ R +F+ K L + M+ + G E
Sbjct: 338 GVVSNSSVSTALTTVYSRLNEIESARLLFDESSEKSLAS-----WNAMISGYAQNGLTEK 392
Query: 383 AMKLIEAMP---FEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYI--LLS 437
A+ L + M P+ + S+L AC L L + L+ E + ++ L
Sbjct: 393 AISLFQEMQKCEVRPNPVTVTSILSACAQLGALSLGK-WVHDLINRESFESNIFVSTALI 451
Query: 438 NIYASQGRFHDVAELRKNMRKRNVI 462
++YA G + L M ++N +
Sbjct: 452 DMYAKCGSITEAQRLFSMMPEKNAV 476
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 102/217 (47%), Gaps = 22/217 (10%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPE----KNVVSWTVMLGGFIRDSRIDDARR 58
E+++ SW AM+ GY + G+ +A +LF +M + N V+ T +L + + +
Sbjct: 371 EKSLASWNAMISGYAQNGLTEKAISLFQEMQKCEVRPNPVTVTSILSACAQLGALSLGKW 430
Query: 59 LFDMMP----EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNR 114
+ D++ E ++ T ++ Y + G + E + +F MP+KN ++W MISGY +
Sbjct: 431 VHDLINRESFESNIFVSTALIDMYAKCGSITEAQRLFSMMPEKNAVTWNAMISGYGLHGY 490
Query: 115 IDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAM-------PMKSVVA 163
A LF M V++ ++L + G +++ E+F++M P+ A
Sbjct: 491 GHEALNLFNEMLHSRVSPTGVTFLSVLYACSHAGLVREGDEIFRSMVHDHGFEPLPEHYA 550
Query: 164 SNSMILGLGQNGEVQKARVVFDQMR-EKDDATWSGMI 199
M+ LG+ G + KA +M E W ++
Sbjct: 551 --CMVDLLGRAGNLDKALDFIRKMPVEPGPPVWGALL 585
>gi|297794613|ref|XP_002865191.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311026|gb|EFH41450.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 697
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 239/643 (37%), Positives = 366/643 (56%), Gaps = 49/643 (7%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
+P +V +T M+ GY + +A LF +MP ++VVSW M+ G + ID A ++F
Sbjct: 61 VPSPHVSLYTKMISGYTRSNRLVDALNLFDEMPLRDVVSWNSMISGCVECGDIDTAVKMF 120
Query: 61 DMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARK 120
D MPE+ VV+ T MV G + G VD+ +F +MP K++ +W M+ GY+ ++D A K
Sbjct: 121 DEMPERSVVSWTAMVNGCFRFGMVDQAERLFCQMPVKDIAAWNAMVHGYLQFGKVDDALK 180
Query: 121 LFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAM---PMKSVVASNSMILGLGQNG-- 175
LF+ MP KN +SWT M+ G Q R +A LFK M +KS + + ++ N
Sbjct: 181 LFKQMPRKNVISWTTMICGLDQNERSGEALNLFKNMLRCCIKSTSRTFTCVITACANAPA 240
Query: 176 ----------------------------------EVQKARVVFDQMREKDDATWSGMIKV 201
+ +R VF +M + A W+ ++
Sbjct: 241 FHMGTQVHGFIIKSGFLYEEYVTASLITLYANCKRTEDSRKVFGEMVHEKVAVWTALLSG 300
Query: 202 YERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVD 261
Y + +++F+ M + + N + S L+ C++L +LD G+++H V+
Sbjct: 301 YSLNRKHEDALNVFSEMIRNSILPNQSTFASGLNSCSALGTLDWGKEIHGVAVKLGLGTV 360
Query: 262 VYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFS 321
+V + L+ MY G + +F K IV WNSII G AQ+G G+ + +F +M
Sbjct: 361 AFVGNSLVVMYSDSGNVNDAVSVFIEIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIR 420
Query: 322 SGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKY-LVEPKTEHYACMVDLLGRAGQV 380
PD++T G+LSACS+ G +++GR++F + S ++ K +HY CMVD+LGR G++
Sbjct: 421 LNKEPDEITFTGLLSACSHCGFLQKGRKLFYYISSGLNHIDRKIQHYTCMVDILGRCGEL 480
Query: 381 EDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIY 440
++A KLIE+M +P+ ++W +LL ACR H +D E AA + L+ K++ Y+LLSNIY
Sbjct: 481 KEAEKLIESMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKSSAAYVLLSNIY 540
Query: 441 ASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKI 500
AS GR+ V++LR M+++ ++K PG SW+ + K H F D P +R+ EK+
Sbjct: 541 ASAGRWSSVSKLRVKMKQKGIMKKPGSSWVVIRGKKHEFFSGD------RPHCLRIFEKL 594
Query: 501 GGL---LREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNL 557
L L+E GY PD LHDV++E+K L YHSE+LA+A+GL+ EG + VMKNL
Sbjct: 595 EFLREKLKELGYVPDYRSALHDVEDEQKEEMLWYHSERLAIAFGLINTVEGSTVTVMKNL 654
Query: 558 RVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
RVC DCH+ IKLIS+V+G +I+LRD RFHHFK+G+CSC DYW
Sbjct: 655 RVCEDCHTVIKLISRVVGCKIVLRDPTRFHHFKNGMCSCGDYW 697
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 122/398 (30%), Positives = 208/398 (52%), Gaps = 4/398 (1%)
Query: 42 VMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVIS 101
V++ + + R+D+AR +FD +P V T M+ GY + R+ + +FDEMP ++V+S
Sbjct: 40 VLICNHLLNRRLDEAREVFDQVPSPHVSLYTKMISGYTRSNRLVDALNLFDEMPLRDVVS 99
Query: 102 WTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSV 161
W +MISG V ID A K+F+ MPE++ VSWTAM+ G + G + A LF MP+K +
Sbjct: 100 WNSMISGCVECGDIDTAVKMFDEMPERSVVSWTAMVNGCFRFGMVDQAERLFCQMPVKDI 159
Query: 162 VASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKE 221
A N+M+ G Q G+V A +F QM K+ +W+ MI ++ E ++LF M +
Sbjct: 160 AAWNAMVHGYLQFGKVDDALKLFKQMPRKNVISWTTMICGLDQNERSGEALNLFKNMLRC 219
Query: 222 GVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKG 281
++ + V++ CA+ + G QVH +++ F + YV + LIT+Y C
Sbjct: 220 CIKSTSRTFTCVITACANAPAFHMGTQVHGFIIKSGFLYEEYVTASLITLYANCKRTEDS 279
Query: 282 KLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYT 341
+ +F + + +W +++SGY+ E +L VF EM + ++P+ T L++CS
Sbjct: 280 RKVFGEMVHEKVAVWTALLSGYSLNRKHEDALNVFSEMIRNSILPNQSTFASGLNSCSAL 339
Query: 342 GKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGS 401
G + G+EI + K + +V + +G V DA+ + + F+ + W S
Sbjct: 340 GTLDWGKEI-HGVAVKLGLGTVAFVGNSLVVMYSDSGNVNDAVSVFIEI-FKKSIVSWNS 397
Query: 402 LLGACRTHMKLDLAEVAAKKLLQL--EPKNAGPYILLS 437
++ C H + A V ++++L EP LLS
Sbjct: 398 IIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLS 435
>gi|168044807|ref|XP_001774871.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673765|gb|EDQ60283.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 902
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 231/618 (37%), Positives = 366/618 (59%), Gaps = 21/618 (3%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEK----NVVSWTVMLGGFIRDSRIDDA 56
+ R++++W M+ G E G EA ++ QM + N +++ ++L + + +
Sbjct: 288 LVNRDLIAWNTMIGGLAEGGYWEEASEVYNQMQREGVMPNKITYVILLNACVNSAALHWG 347
Query: 57 RRLFDMMPE----KDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+ + + + D+ Q ++ Y + G + + R +FD+M +K+VISWT MI G +
Sbjct: 348 KEIHSRVAKAGFTSDIGVQNALISMYSRCGSIKDARLVFDKMVRKDVISWTAMIGGLAKS 407
Query: 113 N----RIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAW------ELFKAMPMKSVV 162
+ V +++ + E N V++T++L + ++ W ++ +A
Sbjct: 408 GFGAEALTVYQEMQQAGVEPNRVTYTSILNACSSPAALE--WGRRIHQQVVEAGLATDAH 465
Query: 163 ASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEG 222
N+++ G V+ AR VFD+M ++D ++ MI Y E + LF +Q+EG
Sbjct: 466 VGNTLVNMYSMCGSVKDARQVFDRMIQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEG 525
Query: 223 VRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGK 282
++ + + I++L+ CA+ SL+ R++H + + F D V + L++ Y KCG
Sbjct: 526 LKPDKVTYINMLNACANSGSLEWAREIHTLVRKGGFFSDTSVGNALVSTYAKCGSFSDAS 585
Query: 283 LIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTG 342
++F+ ++++ WN+II G AQ+G G+ +L++F M GV PD VT V +LSACS+ G
Sbjct: 586 IVFEKMTKRNVISWNAIIGGSAQHGRGQDALQLFERMKMEGVKPDIVTFVSLLSACSHAG 645
Query: 343 KVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSL 402
++EGR F SM + + P EHY CMVDLLGRAGQ+++A LI+ MPF+ + IWG+L
Sbjct: 646 LLEEGRRYFCSMSQDFAIIPTIEHYGCMVDLLGRAGQLDEAEALIKTMPFQANTRIWGAL 705
Query: 403 LGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVI 462
LGACR H + +AE AA+ L+L+ NA Y+ LS++YA+ G + A+LRK M +R V
Sbjct: 706 LGACRIHGNVPVAERAAESSLKLDLDNAVVYVALSHMYAAAGMWDSAAKLRKLMEQRGVT 765
Query: 463 KPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDE 522
K PG SWI+V K+H F D SHP+ I L+++ ++ GY PD+ V+HDVDE
Sbjct: 766 KEPGRSWIQVGDKLHYFVAED-RSHPQSEKIYAELDRLTHAMKMKGYVPDTRSVMHDVDE 824
Query: 523 EEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRD 582
EK +++ +HSE+LA+AYGL+ P G I + KNLRVC DCH+A K ISK++ REII RD
Sbjct: 825 GEKENAVCHHSERLAIAYGLISTPPGTRIHIFKNLRVCPDCHTATKFISKIVDREIIARD 884
Query: 583 ANRFHHFKDGLCSCRDYW 600
NRFHHFKDG+CSC DYW
Sbjct: 885 VNRFHHFKDGVCSCGDYW 902
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 115/425 (27%), Positives = 216/425 (50%), Gaps = 18/425 (4%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVV----SWTVMLGGFIRDSRIDDA 56
M +++VVSWT + GY + G A +F +M ++ VV ++ +L F + +
Sbjct: 187 MEKKSVVSWTITIGGYADCGRSETAFEIFQKMEQEGVVPNRITYISVLNAFSSPAALKWG 246
Query: 57 R----RLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+ R+ + E D T +V Y + G + R++F+++ +++I+W TMI G
Sbjct: 247 KAVHSRILNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEG 306
Query: 113 NRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELF----KAMPMKSVVAS 164
+ A +++ M + N++++ +L + E+ KA +
Sbjct: 307 GYWEEASEVYNQMQREGVMPNKITYVILLNACVNSAALHWGKEIHSRVAKAGFTSDIGVQ 366
Query: 165 NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVR 224
N++I + G ++ AR+VFD+M KD +W+ MI + G+ E + ++ MQ+ GV
Sbjct: 367 NALISMYSRCGSIKDARLVFDKMVRKDVISWTAMIGGLAKSGFGAEALTVYQEMQQAGVE 426
Query: 225 VNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLI 284
N + S+L+ C+S A+L+ GR++H Q+V D +V + L+ MY CG + + +
Sbjct: 427 PNRVTYTSILNACSSPAALEWGRRIHQQVVEAGLATDAHVGNTLVNMYSMCGSVKDARQV 486
Query: 285 FDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKV 344
FD +DIV +N++I GYA + LG+++LK+F + G+ PD VT + +L+AC+ +G +
Sbjct: 487 FDRMIQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSL 546
Query: 345 KEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLG 404
+ REI ++ + A +V + G DA + E M + + I W +++G
Sbjct: 547 EWAREIHTLVRKGGFFSDTSVGNA-LVSTYAKCGSFSDASIVFEKMT-KRNVISWNAIIG 604
Query: 405 ACRTH 409
H
Sbjct: 605 GSAQH 609
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 138/512 (26%), Positives = 249/512 (48%), Gaps = 62/512 (12%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMP--EKNVVSWTVMLGGFIRDSRIDDARR 58
+P++ V+ A++ Y++ G I EA ++ ++ E+ V SW M+ G+I+ I+ A +
Sbjct: 55 VPDQYTVN--ALINMYIQCGSIEEARQVWKKLSYMERTVHSWNAMVVGYIQYGYIEKALK 112
Query: 59 LFDMMPEKDVVAQTNMVLGY---CQD-GRVDEGREI-FDEMPKK---NVISWTTMISGYV 110
L M + + ++ + C+ G ++ GREI F M +V +++ Y
Sbjct: 113 LLRQMQQHGLAPDRTTIMSFLSSCKSPGALEWGREIHFQAMQAGLLFDVKVANCILNMYA 172
Query: 111 NNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVV-------- 162
I+ AR++F+ M +K+ VSWT + GY CGR + A+E+F+ M + VV
Sbjct: 173 KCGSIEEAREVFDKMEKKSVVSWTITIGGYADCGRSETAFEIFQKMEQEGVVPNRITYIS 232
Query: 163 ---------------ASNSMILGLGQN----------------GEVQKARVVFDQMREKD 191
A +S IL G G + R VF+++ +D
Sbjct: 233 VLNAFSSPAALKWGKAVHSRILNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRD 292
Query: 192 DATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHA 251
W+ MI GY E +++ MQ+EGV N + + +L+ C + A+L G+++H+
Sbjct: 293 LIAWNTMIGGLAEGGYWEEASEVYNQMQREGVMPNKITYVILLNACVNSAALHWGKEIHS 352
Query: 252 QLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEK 311
++ + F D+ V + LI+MY +CG + +L+FD KD++ W ++I G A+ G G +
Sbjct: 353 RVAKAGFTSDIGVQNALISMYSRCGSIKDARLVFDKMVRKDVISWTAMIGGLAKSGFGAE 412
Query: 312 SLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYA-CM 370
+L V+ EM +GV P+ VT +L+ACS ++ GR I + + L H +
Sbjct: 413 ALTVYQEMQQAGVEPNRVTYTSILNACSSPAALEWGRRIHQQVVEAGLATDA--HVGNTL 470
Query: 371 VDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNA 430
V++ G V+DA ++ + M + D + + +++G H +L + A K +L+ +
Sbjct: 471 VNMYSMCGSVKDARQVFDRM-IQRDIVAYNAMIGGYAAH---NLGKEALKLFDRLQEEGL 526
Query: 431 GP----YILLSNIYASQGRFHDVAELRKNMRK 458
P YI + N A+ G E+ +RK
Sbjct: 527 KPDKVTYINMLNACANSGSLEWAREIHTLVRK 558
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/334 (24%), Positives = 158/334 (47%), Gaps = 43/334 (12%)
Query: 80 QDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFE------VMPEKNEVSW 133
+DG VD + + + + N + M+ + + R++ + +P++ V+
Sbjct: 4 KDGAVDVVQYLQQQGAQVNSSDYMKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVN- 62
Query: 134 TAMLMGYTQCGRIQDAWELFKAMPM--KSVVASNSMILGLGQNGEVQKARVVFDQMREKD 191
A++ Y QCG I++A +++K + ++V + N+M++G Q G ++KA
Sbjct: 63 -ALINMYIQCGSIEEARQVWKKLSYMERTVHSWNAMVVGYIQYGYIEKA----------- 110
Query: 192 DATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHA 251
+ L MQ+ G+ + +++S LS C S +L+ GR++H
Sbjct: 111 --------------------LKLLRQMQQHGLAPDRTTIMSFLSSCKSPGALEWGREIHF 150
Query: 252 QLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEK 311
Q ++ DV VA+ ++ MY KCG + + + +FD K +V W I GYA G E
Sbjct: 151 QAMQAGLLFDVKVANCILNMYAKCGSIEEAREVFDKMEKKSVVSWTITIGGYADCGRSET 210
Query: 312 SLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMV 371
+ ++F +M GV+P+ +T + VL+A S +K G+ + + + E T +V
Sbjct: 211 AFEIFQKMEQEGVVPNRITYISVLNAFSSPAALKWGKAVHSRILNAGH-ESDTAVGTALV 269
Query: 372 DLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
+ + G +D ++ E + D I W +++G
Sbjct: 270 KMYAKCGSYKDCRQVFEKL-VNRDLIAWNTMIGG 302
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 129/239 (53%), Gaps = 13/239 (5%)
Query: 211 VIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLIT 270
+D+ +Q++G +VN + +L C + L GRQVH +++ + D Y + LI
Sbjct: 7 AVDVVQYLQQQGAQVNSSDYMKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNALIN 66
Query: 271 MYIKCGELVKGKLIFD--NFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDD 328
MYI+CG + + + ++ ++ + + WN+++ GY QYG EK+LK+ +M G+ PD
Sbjct: 67 MYIQCGSIEEARQVWKKLSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLAPDR 126
Query: 329 VTLVGVLSACSYTGKVKEGREI-FESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLI 387
T++ LS+C G ++ GREI F++M++ L + K + C++++ + G +E+A ++
Sbjct: 127 TTIMSFLSSCKSPGALEWGREIHFQAMQAGLLFDVKVAN--CILNMYAKCGSIEEAREVF 184
Query: 388 EAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGP----YILLSNIYAS 442
+ M + + W +G + +E A + ++E + P YI + N ++S
Sbjct: 185 DKME-KKSVVSWTITIGG---YADCGRSETAFEIFQKMEQEGVVPNRITYISVLNAFSS 239
>gi|359480506|ref|XP_003632478.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 590
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 214/489 (43%), Positives = 318/489 (65%), Gaps = 1/489 (0%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MP R+ VSW +++ GY + G E+ LF MP KNVVSW M+ G I D RID+A + F
Sbjct: 73 MPHRDTVSWNSIITGYWKNGCFDESKRLFGLMPTKNVVSWNSMIAGCIEDERIDEAWQYF 132
Query: 61 DMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARK 120
MP+++ + M+ G + RV+E +F+EMP++NVIS+T M+ GY I+ AR
Sbjct: 133 QAMPQRNTASWNAMISGLVRYDRVEEASRLFEEMPRRNVISYTAMVDGYAKIGEIEQARA 192
Query: 121 LFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKA 180
LF MP+KN VSWT M+ GY + G+ +A LF+ MP K++VA +MI G + G+ KA
Sbjct: 193 LFNCMPQKNVVSWTVMISGYVENGKFDEAENLFEQMPDKNIVAMTAMITGYCKEGKTDKA 252
Query: 181 RVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASL 240
+++FDQ+ +D A+W+ MI Y + G E + L + M K G++ + +LISVL+ C+SL
Sbjct: 253 KILFDQIPCRDLASWNAMITGYAQNGSGEEALKLHSQMLKMGMQPDHSTLISVLTACSSL 312
Query: 241 ASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSII 300
ASL GR+ H +++ ++ + + + LITMY KCG ++ +L F D+V WN++I
Sbjct: 313 ASLQEGRKTHVLVLKSGYESRISICNALITMYCKCGSILDSELAFRQIDHPDVVSWNAMI 372
Query: 301 SGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLV 360
+ +A++G +++L F EM S+ V PD +T + +LSAC + GKV E F SM Y +
Sbjct: 373 AAFARHGFYDRALASFGEMRSNRVEPDGITFLSLLSACGHAGKVHESLNWFNSMIESYKI 432
Query: 361 EPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAK 420
P+ EH+AC+VD+L R GQVE A K+I+ MPFE D IWG+LL AC H+ + L E+AAK
Sbjct: 433 VPRPEHFACLVDILSRGGQVEKAYKIIQEMPFEADCGIWGALLAACHVHLNVKLGELAAK 492
Query: 421 KLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFT 480
K+++LEP+N+G Y++LSNIYA+ G + +V +R MR++ V K P SW+E++ KVH F
Sbjct: 493 KIVELEPQNSGAYVVLSNIYAAAGMWGEVTRVRGLMREQGVKKQPAYSWMEIDNKVHFFL 552
Query: 481 GRDCVSHPE 489
G D SHPE
Sbjct: 553 GDD-ASHPE 560
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 102/218 (46%), Gaps = 17/218 (7%)
Query: 247 RQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQY 306
RQ H ++ DVY +V I + G + + +FD +D V WNSII+GY +
Sbjct: 32 RQFHPLSIKLFSTQDVYAFNVQIGNLARAGNIGAARQLFDEMPHRDTVSWNSIITGYWKN 91
Query: 307 GLGEKSLKVFHEMFSSGVMPDD--VTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKT 364
G ++S ++F G+MP V+ +++ C ++ E + F++M + T
Sbjct: 92 GCFDESKRLF------GLMPTKNVVSWNSMIAGCIEDERIDEAWQYFQAMPQR-----NT 140
Query: 365 EHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQ 424
+ M+ L R +VE+A +L E MP + I + +++ + K+ E A
Sbjct: 141 ASWNAMISGLVRYDRVEEASRLFEEMP-RRNVISYTAMVDG---YAKIGEIEQARALFNC 196
Query: 425 LEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVI 462
+ KN + ++ + Y G+F + L + M +N++
Sbjct: 197 MPQKNVVSWTVMISGYVENGKFDEAENLFEQMPDKNIV 234
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 122/291 (41%), Gaps = 47/291 (16%)
Query: 154 KAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVID 213
K + V A N I L + G + AR +FD+M +D +W+ +I Y + G E
Sbjct: 40 KLFSTQDVYAFNVQIGNLARAGNIGAARQLFDEMPHRDTVSWNSIITGYWKNGCFDESKR 99
Query: 214 LFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVR-------------CQFD- 259
LF LM + N S S+++ C +D Q + + ++D
Sbjct: 100 LFGLMPTK----NVVSWNSMIAGCIEDERIDEAWQYFQAMPQRNTASWNAMISGLVRYDR 155
Query: 260 -------------VDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQY 306
+V + ++ Y K GE+ + + +F+ K++V W +ISGY +
Sbjct: 156 VEEASRLFEEMPRRNVISYTAMVDGYAKIGEIEQARALFNCMPQKNVVSWTVMISGYVEN 215
Query: 307 GLGEKSLKVFHEMFSSGVMPDD--VTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKT 364
G +++ +F + MPD V + +++ GK + + +F+ + + L
Sbjct: 216 GKFDEAENLFEQ------MPDKNIVAMTAMITGYCKEGKTDKAKILFDQIPCRDLAS--- 266
Query: 365 EHYACMVDLLGRAGQVEDAMKL---IEAMPFEPDAIIWGSLLGACRTHMKL 412
+ M+ + G E+A+KL + M +PD S+L AC + L
Sbjct: 267 --WNAMITGYAQNGSGEEALKLHSQMLKMGMQPDHSTLISVLTACSSLASL 315
>gi|356547226|ref|XP_003542017.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Glycine max]
Length = 693
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 234/605 (38%), Positives = 353/605 (58%), Gaps = 45/605 (7%)
Query: 40 WTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQ---TNMVLG-YCQDGRVDEGREIFDEMP 95
++ ++ +R ++ RR+ + V +N +L Y + G + + + +FDEM
Sbjct: 90 YSTLIAACVRHRALELGRRVHAHTKASNFVPGVFISNRLLDMYAKCGSLVDAQMLFDEMG 149
Query: 96 KKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKA 155
+++ SW TMI GY R++ ARKLF+ MP+++ SW A + GY + ++A ELF+
Sbjct: 150 HRDLCSWNTMIVGYAKLGRLEQARKLFDEMPQRDNFSWNAAISGYVTHNQPREALELFRV 209
Query: 156 MPMKSVVASN---------------------------------------SMILGL-GQNG 175
M +SN S +L L G+ G
Sbjct: 210 MQRHERSSSNKFTLSSALAASAAIPCLRLGKEIHGYLIRTELNLDEVVWSALLDLYGKCG 269
Query: 176 EVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLS 235
+ +AR +FDQM+++D +W+ MI G E LF + + GVR N + VL+
Sbjct: 270 SLDEARGIFDQMKDRDVVSWTTMIHRCFEDGRREEGFLLFRDLMQSGVRPNEYTFAGVLN 329
Query: 236 VCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVM 295
CA A+ G++VH ++ +D + S L+ MY KCG + +F+ D+V
Sbjct: 330 ACADHAAEHLGKEVHGYMMHAGYDPGSFAISALVHMYSKCGNTRVARRVFNEMHQPDLVS 389
Query: 296 WNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMK 355
W S+I GYAQ G +++L F + SG PD VT VGVLSAC++ G V +G E F S+K
Sbjct: 390 WTSLIVGYAQNGQPDEALHFFELLLQSGTKPDQVTYVGVLSACTHAGLVDKGLEYFHSIK 449
Query: 356 SKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLA 415
K+ + +HYAC++DLL R+G+ ++A +I+ MP +PD +W SLLG CR H L+LA
Sbjct: 450 EKHGLMHTADHYACVIDLLARSGRFKEAENIIDNMPVKPDKFLWASLLGGCRIHGNLELA 509
Query: 416 EVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKK 475
+ AAK L ++EP+N YI L+NIYA+ G + +VA +RK+M ++K PG SWIE++++
Sbjct: 510 KRAAKALYEIEPENPATYITLANIYANAGLWSEVANVRKDMDNMGIVKKPGKSWIEIKRQ 569
Query: 476 VHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEK 535
VH+F D SHP+ I L ++ ++E GY PD++FVLHDV+EE+K +L YHSEK
Sbjct: 570 VHVFLVGD-TSHPKTSDIHEFLGELSKKIKEEGYVPDTNFVLHDVEEEQKEQNLVYHSEK 628
Query: 536 LAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCS 595
LAV +G++ P G PI+V KNLR C DCH+AIK ISK++ R+I +RD+NRFH F+DG CS
Sbjct: 629 LAVVFGIISTPPGTPIKVFKNLRTCVDCHTAIKYISKIVQRKITVRDSNRFHCFEDGSCS 688
Query: 596 CRDYW 600
C+DYW
Sbjct: 689 CKDYW 693
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/374 (22%), Positives = 156/374 (41%), Gaps = 57/374 (15%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
M R++ SW M+ GY + G + +A LF +MP+++ SW + G++ ++ +A LF
Sbjct: 148 MGHRDLCSWNTMIVGYAKLGRLEQARKLFDEMPQRDNFSWNAAISGYVTHNQPREALELF 207
Query: 61 DMMPEK----------------------------------------DVVAQTNMVLGYCQ 80
+M D V + ++ Y +
Sbjct: 208 RVMQRHERSSSNKFTLSSALAASAAIPCLRLGKEIHGYLIRTELNLDEVVWSALLDLYGK 267
Query: 81 DGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRID----VARKLFEVMPEKNEVSWTAM 136
G +DE R IFD+M ++V+SWTTMI + R + + R L + NE ++ +
Sbjct: 268 CGSLDEARGIFDQMKDRDVVSWTTMIHRCFEDGRREEGFLLFRDLMQSGVRPNEYTFAGV 327
Query: 137 LMGYTQCGRIQDAWELFKAMPMKSV----VASNSMILGLGQNGEVQKARVVFDQMREKDD 192
L E+ M A ++++ + G + AR VF++M + D
Sbjct: 328 LNACADHAAEHLGKEVHGYMMHAGYDPGSFAISALVHMYSKCGNTRVARRVFNEMHQPDL 387
Query: 193 ATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQ 252
+W+ +I Y + G E + F L+ + G + + + + VLS C +D G +
Sbjct: 388 VSWTSLIVGYAQNGQPDEALHFFELLLQSGTKPDQVTYVGVLSACTHAGLVDKGLEYFHS 447
Query: 253 LVRCQ---FDVDVYVASVLITMYIKCGELVKGKLIFDNFASK-DIVMWNSIISGYAQYG- 307
+ D Y + +I + + G + + I DN K D +W S++ G +G
Sbjct: 448 IKEKHGLMHTADHY--ACVIDLLARSGRFKEAENIIDNMPVKPDKFLWASLLGGCRIHGN 505
Query: 308 --LGEKSLKVFHEM 319
L +++ K +E+
Sbjct: 506 LELAKRAAKALYEI 519
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 75/176 (42%), Gaps = 15/176 (8%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV----VSWTVMLGGFIRDSRIDDA 56
M + ++VSWT+++ GY + G EA F + + V++ +L +D
Sbjct: 382 MHQPDLVSWTSLIVGYAQNGQPDEALHFFELLLQSGTKPDQVTYVGVLSACTHAGLVDKG 441
Query: 57 RRLFDMMPEKDVVAQTN-----MVLGYCQDGRVDEGREIFDEMP-KKNVISWTTMISGYV 110
F + EK + T ++ + GR E I D MP K + W +++ G
Sbjct: 442 LEYFHSIKEKHGLMHTADHYACVIDLLARSGRFKEAENIIDNMPVKPDKFLWASLLGGCR 501
Query: 111 NNNRIDVARK----LFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVV 162
+ +++A++ L+E+ PE N ++ + Y G + + K M +V
Sbjct: 502 IHGNLELAKRAAKALYEIEPE-NPATYITLANIYANAGLWSEVANVRKDMDNMGIV 556
>gi|224060327|ref|XP_002300144.1| predicted protein [Populus trichocarpa]
gi|222847402|gb|EEE84949.1| predicted protein [Populus trichocarpa]
Length = 666
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 231/554 (41%), Positives = 348/554 (62%), Gaps = 19/554 (3%)
Query: 65 EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLF-E 123
E D+ + ++ Y + G++ R +FDE+P++N+++WT++I+GYV N+ A +F E
Sbjct: 114 ESDLFVSSALIDMYSKCGKLSNARVLFDEIPRRNIVTWTSLITGYVQNDDAHEALMVFKE 173
Query: 124 VMPEKNE---------VSWTAMLMGYTQCGRIQDA-------WELFKAMPMKSVVASNSM 167
+ EK+E V AM+ + C R+ + K K + N++
Sbjct: 174 FLFEKSEGNGEEVGTSVDSVAMISVLSACSRVSNKAVSEGVHGVAIKVGLDKVMGVENTL 233
Query: 168 ILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGV-RVN 226
+ + GEV +R VFD M EKD +W+ MI VY + G + ++F M K G + N
Sbjct: 234 LDAYAKCGEVSLSRKVFDDMAEKDVVSWNSMIAVYAQNGLSTDAFEVFHGMLKAGGGKYN 293
Query: 227 FPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFD 286
+L ++L CA +L G +H Q+++ + +V +A+ +I MY KCG+ + FD
Sbjct: 294 EVTLSTLLLACAHEGALRVGMCLHDQVIKMGYVNNVIMATSIIDMYCKCGQAEMARNAFD 353
Query: 287 NFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKE 346
K++ W ++I+GY +G ++L VF++M +GV P+ +T + VL+ACS+ G ++E
Sbjct: 354 GMKEKNVRSWTAMIAGYGMHGFAREALDVFYQMIWAGVKPNYITFISVLAACSHAGFLEE 413
Query: 347 GREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGAC 406
G F +M +Y VEP EHY CMVDLLGRAG +++A LI++M D ++WGSLL AC
Sbjct: 414 GWRWFNAMSHEYNVEPGVEHYGCMVDLLGRAGYIKEAYNLIKSMKVRRDFVLWGSLLAAC 473
Query: 407 RTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPG 466
R H ++LAE++A++L +L+P N G Y+LL+NIYA GR+ DV +R ++ R ++KPPG
Sbjct: 474 RIHKDVELAEISARELFKLDPSNCGYYVLLANIYADAGRWKDVERMRILVKDRGLVKPPG 533
Query: 467 CSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKV 526
S +E++ +VH+F D HP+H I + LE++ L+EAGY P+ + VLHDVDEEEK
Sbjct: 534 YSLVELKGRVHVFLVGD-KEHPQHEKIYKYLEELSVKLQEAGYVPNMASVLHDVDEEEKE 592
Query: 527 HSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRF 586
+R HSEKLAVA+G++ G I V+KNLRVCGDCH+ IKLISK++ REII+RDA RF
Sbjct: 593 MIVRVHSEKLAVAFGVMNSIPGSTIHVIKNLRVCGDCHTVIKLISKIVSREIIVRDAKRF 652
Query: 587 HHFKDGLCSCRDYW 600
HHFKDGLCSC DYW
Sbjct: 653 HHFKDGLCSCGDYW 666
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 114/233 (48%), Gaps = 12/233 (5%)
Query: 182 VVFDQMREKDDA-TWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASL 240
+F++ ++ D +W+ +I R G E + F+ M+K ++ N + + C++L
Sbjct: 36 TLFNKYFDRTDVYSWNSLIAELARGGDSCESLRAFSWMRKLDIKPNRSTFPCAIKSCSAL 95
Query: 241 ASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSII 300
L+ G+Q H Q + F+ D++V+S LI MY KCG+L +++FD ++IV W S+I
Sbjct: 96 FDLNSGKQAHQQALVFGFESDLFVSSALIDMYSKCGKLSNARVLFDEIPRRNIVTWTSLI 155
Query: 301 SGYAQYGLGEKSLKVFHEMF---------SSGVMPDDVTLVGVLSACSYTGKVKEGREIF 351
+GY Q ++L VF E G D V ++ VLSACS K E
Sbjct: 156 TGYVQNDDAHEALMVFKEFLFEKSEGNGEEVGTSVDSVAMISVLSACSRVSN-KAVSEGV 214
Query: 352 ESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLG 404
+ K ++ ++D + G+V + K+ + M E D + W S++
Sbjct: 215 HGVAIKVGLDKVMGVENTLLDAYAKCGEVSLSRKVFDDMA-EKDVVSWNSMIA 266
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 105/218 (48%), Gaps = 19/218 (8%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEK-----NVVSWTVMLGGFIRDSRIDD 55
M E++VVSW +M+ Y + G+ T+A +F M + N V+ + +L + +
Sbjct: 253 MAEKDVVSWNSMIAVYAQNGLSTDAFEVFHGMLKAGGGKYNEVTLSTLLLACAHEGALRV 312
Query: 56 ARRLFDMMPE----KDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGY-- 109
L D + + +V+ T+++ YC+ G+ + R FD M +KNV SWT MI+GY
Sbjct: 313 GMCLHDQVIKMGYVNNVIMATSIIDMYCKCGQAEMARNAFDGMKEKNVRSWTAMIAGYGM 372
Query: 110 --VNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMK-----SVV 162
+DV ++ + N +++ ++L + G +++ W F AM + V
Sbjct: 373 HGFAREALDVFYQMIWAGVKPNYITFISVLAACSHAGFLEEGWRWFNAMSHEYNVEPGVE 432
Query: 163 ASNSMILGLGQNGEVQKARVVFDQMR-EKDDATWSGMI 199
M+ LG+ G +++A + M+ +D W ++
Sbjct: 433 HYGCMVDLLGRAGYIKEAYNLIKSMKVRRDFVLWGSLL 470
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 79/361 (21%), Positives = 145/361 (40%), Gaps = 90/361 (24%)
Query: 1 MPERNVVSWTAMVRGYVE-------------------EGMITEAGTLFWQMPEKNVVSW- 40
+P RN+V+WT+++ GYV+ EG E GT + +V+S
Sbjct: 143 IPRRNIVTWTSLITGYVQNDDAHEALMVFKEFLFEKSEGNGEEVGTSVDSVAMISVLSAC 202
Query: 41 ----------------------------TVMLGGFIRDSRIDDARRLFDMMPEKDVVAQT 72
+L + + + +R++FD M EKDVV+
Sbjct: 203 SRVSNKAVSEGVHGVAIKVGLDKVMGVENTLLDAYAKCGEVSLSRKVFDDMAEKDVVSWN 262
Query: 73 NMVLGYCQDGRVDEGREIFDEMPKK-----NVISWTTMISGYVNNNRIDVARKLFEVMPE 127
+M+ Y Q+G + E+F M K N ++ +T++ + + V L + + +
Sbjct: 263 SMIAVYAQNGLSTDAFEVFHGMLKAGGGKYNEVTLSTLLLACAHEGALRVGMCLHDQVIK 322
Query: 128 ----KNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVV 183
N + T+++ Y +CG+ + A F M K+V + +MI G G +G ++A V
Sbjct: 323 MGYVNNVIMATSIIDMYCKCGQAEMARNAFDGMKEKNVRSWTAMIAGYGMHGFAREALDV 382
Query: 184 FDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASL 243
F QM W+ GV+ N+ + ISVL+ C+ L
Sbjct: 383 FYQM------IWA-------------------------GVKPNYITFISVLAACSHAGFL 411
Query: 244 DHG-RQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKG-KLIFDNFASKDIVMWNSIIS 301
+ G R +A + V ++ + + G + + LI +D V+W S+++
Sbjct: 412 EEGWRWFNAMSHEYNVEPGVEHYGCMVDLLGRAGYIKEAYNLIKSMKVRRDFVLWGSLLA 471
Query: 302 G 302
Sbjct: 472 A 472
Score = 45.8 bits (107), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 15/162 (9%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM----PEKNVVSWTVMLGGFIRDSRIDDA 56
M E+NV SWTAM+ GY G EA +F+QM + N +++ +L +++
Sbjct: 355 MKEKNVRSWTAMIAGYGMHGFAREALDVFYQMIWAGVKPNYITFISVLAACSHAGFLEEG 414
Query: 57 RRLFDMMP-----EKDVVAQTNMVLGYCQDGRVDEGREIFDEMP-KKNVISWTTMISGYV 110
R F+ M E V MV + G + E + M +++ + W ++++
Sbjct: 415 WRWFNAMSHEYNVEPGVEHYGCMVDLLGRAGYIKEAYNLIKSMKVRRDFVLWGSLLAACR 474
Query: 111 NNNRIDV----ARKLFEVMPEKNEVSWTAMLMGYTQCGRIQD 148
+ +++ AR+LF++ P N + + Y GR +D
Sbjct: 475 IHKDVELAEISARELFKLDPS-NCGYYVLLANIYADAGRWKD 515
>gi|222637368|gb|EEE67500.1| hypothetical protein OsJ_24934 [Oryza sativa Japonica Group]
Length = 830
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 232/585 (39%), Positives = 344/585 (58%), Gaps = 44/585 (7%)
Query: 55 DARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNR 114
DAR++ D MP+KD + T MV+GY + G V+ R +F+E+ K + W MISGYV +
Sbjct: 219 DARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISGYVQSGM 278
Query: 115 IDVARKLFEVMPEK----NEVSWTAMLMG------------------------------- 139
A +LF M + +E ++T++L
Sbjct: 279 CADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFVPEAALP 338
Query: 140 --------YTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKD 191
Y++ G+I A +F M +K VV+ N+++ G +G + KA VF M K+
Sbjct: 339 VNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYKN 398
Query: 192 DATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHA 251
D +W M+ Y G + + LF M+ E V+ + ++ C L +L HGRQ+HA
Sbjct: 399 DLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGALKHGRQLHA 458
Query: 252 QLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEK 311
LV+C F+ + L+TMY KCG + +L+F + D V WN++IS Q+G G +
Sbjct: 459 HLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAMISALGQHGHGRE 518
Query: 312 SLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMV 371
+L++F +M + G+ PD ++ + +L+AC++ G V EG FESMK + + P +HYA ++
Sbjct: 519 ALELFDQMVAEGIDPDRISFLTILTACNHAGLVDEGFHYFESMKRDFGISPGEDHYARLI 578
Query: 372 DLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAG 431
DLLGR+G++ +A LI+ MPFEP IW ++L CRT+ ++ AA +L ++ P++ G
Sbjct: 579 DLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSGCRTNGDMEFGAYAADQLFRMIPQHDG 638
Query: 432 PYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHP 491
YILLSN Y++ GR+ D A +RK MR R V K PGCSWIEV K+H+F D HPE
Sbjct: 639 TYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEVGSKIHVFLVGD-TKHPEAQ 697
Query: 492 MIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPI 551
+ + LE IG +R+ GY PD+ FVLHD++ EK + L HSEKLAV +GL+KLP G +
Sbjct: 698 EVYQFLEVIGARMRKLGYVPDTKFVLHDMEPHEKEYILFAHSEKLAVGFGLLKLPPGATV 757
Query: 552 RVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSC 596
V+KNLR+CGDCH+A+ +SK +GREI++RD RFHHFKDG CSC
Sbjct: 758 TVLKNLRICGDCHTAMMFMSKAVGREIVVRDVRRFHHFKDGECSC 802
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 140/328 (42%), Gaps = 82/328 (25%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MP+++ ++WT MV GYV G + A ++F ++ K V W M+ G+++ DA LF
Sbjct: 227 MPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISGYVQSGMCADAFELF 286
Query: 61 -------------------------------------------DMMPEKDVVAQTNMVLG 77
+ +PE + +V
Sbjct: 287 RRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTL 346
Query: 78 YCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAML 137
Y + G++ + IFD M K+V+SW T++SGY+++ +D A ++F+VMP KN++SW M+
Sbjct: 347 YSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMV 406
Query: 138 MGYTQCGRIQDAWELFKAMPMKSV------------------------------------ 161
GY G +DA +LF M + V
Sbjct: 407 SGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFE 466
Query: 162 ---VASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLM 218
A N+++ + G V AR+VF M D +W+ MI + G+ E ++LF M
Sbjct: 467 ASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAMISALGQHGHGREALELFDQM 526
Query: 219 QKEGVRVNFPSLISVLSVCASLASLDHG 246
EG+ + S +++L+ C +D G
Sbjct: 527 VAEGIDPDRISFLTILTACNHAGLVDEG 554
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 126/273 (46%), Gaps = 22/273 (8%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
M ++VVSW ++ GY++ G + +A +F MP KN +SW VM+ G++ +DA +LF
Sbjct: 363 MNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLF 422
Query: 61 DMMPEKDV----VAQTNMVLGYCQDGRVDEGREIFDEMPK----KNVISWTTMISGYVNN 112
+ M +DV + + G + GR++ + + + + +++ Y
Sbjct: 423 NQMRAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKC 482
Query: 113 NRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSV----VASNSMI 168
++ AR +F VMP + VSW AM+ Q G ++A ELF M + + ++ +++
Sbjct: 483 GAVNDARLVFLVMPNLDSVSWNAMISALGQHGHGREALELFDQMVAEGIDPDRISFLTIL 542
Query: 169 LGLGQNGEVQKARVVFDQMR-----EKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGV 223
G V + F+ M+ + ++ +I + R G E DL M E
Sbjct: 543 TACNHAGLVDEGFHYFESMKRDFGISPGEDHYARLIDLLGRSGRIGEARDLIKTMPFEPT 602
Query: 224 RVNFPSLI-SVLSVCASLASLDHGRQVHAQLVR 255
PS+ ++LS C + ++ G QL R
Sbjct: 603 ----PSIWEAILSGCRTNGDMEFGAYAADQLFR 631
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 79/356 (22%), Positives = 153/356 (42%), Gaps = 28/356 (7%)
Query: 126 PEKNEVSWTAMLMGYTQCGRIQDAWELFKAMP--MKSVVASNSMILGLGQNGEVQKARVV 183
P + T+++ GR++DA F A+P + V N+M+ + A V
Sbjct: 88 PTRAPSPATSLVAAQAAAGRLRDAAAFFDAVPPARRDTVLHNAMMSAFARASLAAPAVSV 147
Query: 184 FDQM-----REKDDATWSGMIKVYERKGYELEV---IDLFTLMQKEGVRVNFP---SLIS 232
F + DD +++ +I + + L L + K G +LI+
Sbjct: 148 FHALLGSGSLRPDDYSFTALISAVGQM-HNLAAPHCTQLHCSVLKSGAAAVLSVSNALIA 206
Query: 233 VLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKD 292
+ C + + R+V ++ D D + ++ Y++ G++ + +F+ K
Sbjct: 207 LYMKCDTPEASWDARKVLDEMP----DKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKF 262
Query: 293 IVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFE 352
V+WN++ISGY Q G+ + ++F M S V D+ T VLSAC+ G G+ +
Sbjct: 263 DVVWNAMISGYVQSGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHG 322
Query: 353 S---MKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTH 409
++ ++ E +V L + G++ A ++ + M + D + W ++L
Sbjct: 323 QIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTMNLK-DVVSWNTILSGYIDS 381
Query: 410 MKLDLAEVAAKKLLQLEP-KNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKP 464
LD A ++ ++ P KN ++++ + Y G D +L MR +V KP
Sbjct: 382 GCLD----KAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDV-KP 432
>gi|359495457|ref|XP_003634994.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Vitis vinifera]
Length = 993
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 247/643 (38%), Positives = 371/643 (57%), Gaps = 48/643 (7%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF---- 60
NV A++ Y G + EA +F+ M + + +SW ML GF+++ +A + +
Sbjct: 352 NVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMR 411
Query: 61 DMMPEKDVVAQTNMVLGYCQDGRVDEGREI------------------------------ 90
D + D+VA +++ + G G +I
Sbjct: 412 DAGQKPDLVAVISIIAASARSGNTLNGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMK 471
Query: 91 -----FDEMPKKNVISWTTMISGYVNNNRIDVARKLF-EVMPEKNEVS---WTAMLMGYT 141
FD+MP K+V+SWTT+I+G+ N A +LF EV E ++ +++L+ +
Sbjct: 472 YMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACS 531
Query: 142 QCGRIQDAWELFKAMPMKSV---VASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGM 198
I E+ + K + V N ++ G+ G V A +F+ + KD +W+ M
Sbjct: 532 GLKLISSVKEIHSYIIRKGLSDLVLQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSM 591
Query: 199 IKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQF 258
I Y G E ++LF LM++ GV + SL+S+LS ASL++L G+++H L+R F
Sbjct: 592 ISCYVHNGLANEALELFHLMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRKGF 651
Query: 259 DVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHE 318
++ +AS L+ MY +CG L K + +F+ +KD+V+W S+I+ Y +G G ++ +F
Sbjct: 652 VLEGSLASTLVDMYARCGTLEKSRNVFNFIRNKDLVLWTSMINAYGMHGCGRAAIDLFRR 711
Query: 319 MFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAG 378
M + PD + V VL ACS++G + EGR ESMK +Y +EP EHY C+VDLLGRA
Sbjct: 712 MEDESIAPDHIAFVAVLYACSHSGLMNEGRRFLESMKYEYQLEPWPEHYVCLVDLLGRAN 771
Query: 379 QVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSN 438
+E+A + ++ M EP A +W +LLGAC+ H +L E+AA+KLL+++P+N G Y+L+SN
Sbjct: 772 HLEEAYQFVKGMEVEPTAEVWCALLGACQIHSNKELGEIAAQKLLEMDPENPGNYVLVSN 831
Query: 439 IYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLE 498
+YA++ R+ DV E+R M+ + K PGCSWIEV KVH F RD SHP+ I L
Sbjct: 832 VYAAERRWKDVEEVRMRMKASGLKKNPGCSWIEVGNKVHTFMARD-KSHPQSYEIYSKLS 890
Query: 499 KIG-GLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNL 557
+I L +E GY + FVLH+ EEEKV L HSE+LA+AYG++ PEG +R+ KNL
Sbjct: 891 QITEKLAKEGGYVAQTKFVLHNAKEEEKVQMLYGHSERLAIAYGMLTTPEGASLRITKNL 950
Query: 558 RVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
RVCGDCH+ KLISK RE+++RDANRFHHFK G+CSC D W
Sbjct: 951 RVCGDCHNFCKLISKFFERELVMRDANRFHHFKGGVCSCGDVW 993
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 112/430 (26%), Positives = 209/430 (48%), Gaps = 23/430 (5%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV----VSWTVMLG--GFIRDSRID 54
MP + + +W AM+ YV G + L+ +M + ++ +L G ++D R
Sbjct: 176 MPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKACGLLKDRRCG 235
Query: 55 -DARRLFDMMPEKDVVAQTNMVLG-YCQDGRVDEGREIFDEMPKK-NVISWTTMISGYVN 111
+ L +V N ++G Y + ++ R++FD MP+K +V+SW +MIS Y +
Sbjct: 236 AEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSS 295
Query: 112 NNRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKS-----VV 162
N + A +LF M + N ++ A L I+ A +KS V
Sbjct: 296 NGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGM-FIHATVLKSSYYINVF 354
Query: 163 ASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEG 222
+N++I + G++ +A +F M + D +W+ M+ + + G E + + M+ G
Sbjct: 355 VANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAG 414
Query: 223 VRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGK 282
+ + ++IS+++ A + +G Q+HA ++ D D+ V + L+ MY K +
Sbjct: 415 QKPDLVAVISIIAASARSGNTLNGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMD 474
Query: 283 LIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTG 342
IFD KD+V W +II+G+AQ G ++L++F E+ G+ D + + +L ACS
Sbjct: 475 CIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLK 534
Query: 343 KVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSL 402
+ +EI + K L + ++ +VD+ G G V+ A ++ E + F+ D + W S+
Sbjct: 535 LISSVKEIHSYIIRKGLSDLVLQN--GIVDVYGECGNVDYAARMFELIEFK-DVVSWTSM 591
Query: 403 LGACRTHMKL 412
+ +C H L
Sbjct: 592 I-SCYVHNGL 600
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 91/352 (25%), Positives = 175/352 (49%), Gaps = 17/352 (4%)
Query: 66 KDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVM 125
V T +V Y + G + + ++FD MP K + +W MI YV N + +L+ M
Sbjct: 148 NSVFLSTRLVFMYGKCGCLVDAEKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSLELYREM 207
Query: 126 PEK----NEVSWTAMLMGYTQCGRIQD---AWEL----FKAMPMKSVVASNSMILGLGQN 174
+ ++ +L CG ++D E+ K + V +NS++ +
Sbjct: 208 RVSGIPLDACTFPCILKA---CGLLKDRRCGAEVHGLAIKEGYVSIVFVANSIVGMYTKC 264
Query: 175 GEVQKARVVFDQMREKDDA-TWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISV 233
++ AR +FD+M EK+D +W+ MI Y G +E + LF MQK + N + ++
Sbjct: 265 NDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAA 324
Query: 234 LSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDI 293
L C + + G +HA +++ + ++V+VA+ LI MY + G++ + IF N D
Sbjct: 325 LQACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDT 384
Query: 294 VMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFES 353
+ WNS++SG+ Q GL ++L+ +HEM +G PD V ++ +++A + +G G +I +
Sbjct: 385 ISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLNGMQI-HA 443
Query: 354 MKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
K ++ + +VD+ + ++ + + MP + D + W +++
Sbjct: 444 YAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMP-DKDVVSWTTIIAG 494
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 128/263 (48%), Gaps = 15/263 (5%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSR----IDDA 56
MP+++VVSWT ++ G+ + G + A LF ++ + + +M+ + I
Sbjct: 480 MPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLISSV 539
Query: 57 RRLFDMMPEK---DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNN 113
+ + + K D+V Q +V Y + G VD +F+ + K+V+SWT+MIS YV+N
Sbjct: 540 KEIHSYIIRKGLSDLVLQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHNG 599
Query: 114 RIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMIL 169
+ A +LF +M E + +S ++L ++ E+ + K V S+
Sbjct: 600 LANEALELFHLMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLAS 659
Query: 170 GL----GQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRV 225
L + G ++K+R VF+ +R KD W+ MI Y G IDLF M+ E +
Sbjct: 660 TLVDMYARCGTLEKSRNVFNFIRNKDLVLWTSMINAYGMHGCGRAAIDLFRRMEDESIAP 719
Query: 226 NFPSLISVLSVCASLASLDHGRQ 248
+ + ++VL C+ ++ GR+
Sbjct: 720 DHIAFVAVLYACSHSGLMNEGRR 742
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 89/176 (50%), Gaps = 4/176 (2%)
Query: 232 SVLSVCASLASLDHGRQVHAQLVRCQFDVD-VYVASVLITMYIKCGELVKGKLIFDNFAS 290
SVL +C S +L G+QVHA ++ + V++++ L+ MY KCG LV + +FD
Sbjct: 119 SVLELCGSKKALSEGQQVHAHMITSNALFNSVFLSTRLVFMYGKCGCLVDAEKLFDGMPH 178
Query: 291 KDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREI 350
K I WN++I Y G SL+++ EM SG+ D T +L AC + G E+
Sbjct: 179 KTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKACGLLKDRRCGAEV 238
Query: 351 FE-SMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
++K Y+ + +V + + + A +L + MP + D + W S++ A
Sbjct: 239 HGLAIKEGYVSIVFVAN--SIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISA 292
>gi|356528388|ref|XP_003532785.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
mitochondrial-like [Glycine max]
Length = 721
Score = 453 bits (1166), Expect = e-125, Method: Compositional matrix adjust.
Identities = 239/642 (37%), Positives = 364/642 (56%), Gaps = 43/642 (6%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
+P +V +T M+ Y + + EA LF ++P K+VVSW ++ G + I AR+LF
Sbjct: 81 IPTPHVSLYTIMLHAYAQNHRLREAIDLFRRIPFKDVVSWNSIIKGCLHCGDIVTARKLF 140
Query: 61 DMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMP--KKNVISWTTMISGYVNNNRIDVA 118
D MP + VV+ T +V G + G V E +F M ++V +W MI GY +N R+D A
Sbjct: 141 DEMPRRTVVSWTTLVDGLLRLGIVQEAETLFWAMEPMDRDVAAWNAMIHGYCSNGRVDDA 200
Query: 119 RKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSV-VASNSMILGLGQNGEV 177
+LF MP ++ +SW++M+ G G+ + A LF+ M V ++S ++ GL ++
Sbjct: 201 LQLFCQMPSRDVISWSSMIAGLDHNGKSEQALVLFRDMVASGVCLSSGVLVCGLSAAAKI 260
Query: 178 QKARV---------------------------------------VFDQMREKDDATWSGM 198
RV VF ++ K W+ +
Sbjct: 261 PAWRVGIQIHCSVFKLGDWHFDEFVSASLVTFYAGCKQMEAACRVFGEVVYKSVVIWTAL 320
Query: 199 IKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQF 258
+ Y E +++F M + V N S S L+ C L ++ G+ +HA V+
Sbjct: 321 LTGYGLNDKHREALEVFGEMMRIDVVPNESSFTSALNSCCGLEDIERGKVIHAAAVKMGL 380
Query: 259 DVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHE 318
+ YV L+ MY KCG + +F K++V WNS+I G AQ+G G +L +F++
Sbjct: 381 ESGGYVGGSLVVMYSKCGYVSDAVYVFKGINEKNVVSWNSVIVGCAQHGCGMWALALFNQ 440
Query: 319 MFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAG 378
M GV PD +T+ G+LSACS++G +++ R F K V EHY MVD+LGR G
Sbjct: 441 MLREGVDPDGITVTGLLSACSHSGMLQKARCFFRYFGQKRSVTLTIEHYTSMVDVLGRCG 500
Query: 379 QVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSN 438
++E+A ++ +MP + ++++W +LL ACR H LDLA+ AA ++ ++EP + Y+LLSN
Sbjct: 501 ELEEAEAVVMSMPMKANSMVWLALLSACRKHSNLDLAKRAANQIFEIEPDCSAAYVLLSN 560
Query: 439 IYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLE 498
+YAS R+ +VA +R+ M+ V+K PG SW+ ++ + H F D SHP I + LE
Sbjct: 561 LYASSSRWAEVALIRRKMKHNGVVKKPGSSWLTLKGQKHKFLSAD-RSHPLAEKIYQKLE 619
Query: 499 KIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLR 558
+G L+E GY PD F LHDV+ E+K L YHSE+LA+A+GL+ EG I VMKNLR
Sbjct: 620 WLGVKLKELGYVPDQQFALHDVETEQKEEMLSYHSERLAIAFGLLSTVEGSAITVMKNLR 679
Query: 559 VCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
VCGDCH+AIKL++K++ REI++RD++RFH FK+G+CSC DYW
Sbjct: 680 VCGDCHNAIKLMAKIVDREIVVRDSSRFHDFKNGICSCGDYW 721
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 109/370 (29%), Positives = 191/370 (51%), Gaps = 5/370 (1%)
Query: 43 MLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISW 102
+L + + +D+AR +FD +P V T M+ Y Q+ R+ E ++F +P K+V+SW
Sbjct: 61 LLFHHLNNRSLDEARAIFDQIPTPHVSLYTIMLHAYAQNHRLREAIDLFRRIPFKDVVSW 120
Query: 103 TTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAM-PM-KS 160
++I G ++ I ARKLF+ MP + VSWT ++ G + G +Q+A LF AM PM +
Sbjct: 121 NSIIKGCLHCGDIVTARKLFDEMPRRTVVSWTTLVDGLLRLGIVQEAETLFWAMEPMDRD 180
Query: 161 VVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQK 220
V A N+MI G NG V A +F QM +D +WS MI + G + + LF M
Sbjct: 181 VAAWNAMIHGYCSNGRVDDALQLFCQMPSRDVISWSSMIAGLDHNGKSEQALVLFRDMVA 240
Query: 221 EGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRC-QFDVDVYVASVLITMYIKCGELV 279
GV ++ L+ LS A + + G Q+H + + + D +V++ L+T Y C ++
Sbjct: 241 SGVCLSSGVLVCGLSAAAKIPAWRVGIQIHCSVFKLGDWHFDEFVSASLVTFYAGCKQME 300
Query: 280 KGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACS 339
+F K +V+W ++++GY ++L+VF EM V+P++ + L++C
Sbjct: 301 AACRVFGEVVYKSVVIWTALLTGYGLNDKHREALEVFGEMMRIDVVPNESSFTSALNSCC 360
Query: 340 YTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIW 399
++ G+ + + K +E +V + + G V DA+ + + + E + + W
Sbjct: 361 GLEDIERGK-VIHAAAVKMGLESGGYVGGSLVVMYSKCGYVSDAVYVFKGIN-EKNVVSW 418
Query: 400 GSLLGACRTH 409
S++ C H
Sbjct: 419 NSVIVGCAQH 428
>gi|359478499|ref|XP_003632122.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 577
Score = 453 bits (1166), Expect = e-124, Method: Compositional matrix adjust.
Identities = 229/544 (42%), Positives = 333/544 (61%), Gaps = 2/544 (0%)
Query: 58 RLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDV 117
++ M E D++ QT ++ Y + G + + +F MP+++V++ MIS + ++
Sbjct: 35 QIMKMGFEYDMILQTGLLDFYAKVGDLKCAKRVFMGMPRRDVVANNAMISALSKHGYVEE 94
Query: 118 ARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEV 177
AR LF+ M E+N SW +M+ Y + G I A +F P+K VV+ N++I G ++ ++
Sbjct: 95 ARNLFDNMTERNSCSWNSMITCYCKLGDINSARLMFDCNPVKDVVSWNAIIDGYCKSKQL 154
Query: 178 QKARVVFDQM-REKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSV 236
A+ +F M ++ TW+ MI Y + G I +F MQ E V+ +++S+LS
Sbjct: 155 VAAQELFLLMGSARNSVTWNTMISAYVQCGEFGTAISMFQQMQSENVKPTEVTMVSLLSA 214
Query: 237 CASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMW 296
CA L +LD G +H + + +DV + + LI MY KCG L +F + K+I W
Sbjct: 215 CAHLGALDMGEWIHGYIRTKRLKIDVVLGNALIDMYCKCGALEAAIDVFHGLSRKNIFCW 274
Query: 297 NSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKS 356
NSII G G GE+++ F M G+ PD VT VG+LS CS++G + G+ F M
Sbjct: 275 NSIIVGLGMNGRGEEAIAAFIVMEKEGIKPDGVTFVGILSGCSHSGLLSAGQRYFSEMLG 334
Query: 357 KYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAE 416
Y +EP EHY CMVDLLGRAG +++A++LI AMP +P++++ GSLL AC+ H L E
Sbjct: 335 VYGLEPGVEHYGCMVDLLGRAGYLKEALELIRAMPMKPNSMVLGSLLRACQIHKDTKLGE 394
Query: 417 VAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKV 476
++LL+L+P + G Y+ LSN+YAS R+ DV RK M KR V K PGCS IEV V
Sbjct: 395 QVTQQLLELDPCDGGNYVFLSNLYASLSRWDDVNTCRKLMIKRGVHKTPGCSSIEVNNIV 454
Query: 477 HMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKL 536
H F D SHP+ I L++I L+ G+ P+++ VLHD++EEEK ++RYHSE++
Sbjct: 455 HEFVAGD-TSHPQFTQINAFLDEIAKELKGQGHVPNTANVLHDIEEEEKEGAIRYHSERI 513
Query: 537 AVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSC 596
AVA+GL+ P G IRV+KNLR C DCHSA+KLIS REII+RD RFHHF++G CSC
Sbjct: 514 AVAFGLMSTPPGKTIRVVKNLRTCSDCHSAMKLISNAFKREIIVRDRKRFHHFRNGSCSC 573
Query: 597 RDYW 600
DYW
Sbjct: 574 NDYW 577
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 137/292 (46%), Gaps = 40/292 (13%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDM 62
E +++ T ++ Y + G + A +F MP ++VV+ M+ + +++AR LFD
Sbjct: 42 EYDMILQTGLLDFYAKVGDLKCAKRVFMGMPRRDVVANNAMISALSKHGYVEEARNLFDN 101
Query: 63 MPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLF 122
M E++ + +M+ YC+ G ++ R +FD P K+V+SW +I GY + ++ A++LF
Sbjct: 102 MTERNSCSWNSMITCYCKLGDINSARLMFDCNPVKDVVSWNAIIDGYCKSKQLVAAQELF 161
Query: 123 EVM-PEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKS--------------------- 160
+M +N V+W M+ Y QCG A +F+ M ++
Sbjct: 162 LLMGSARNSVTWNTMISAYVQCGEFGTAISMFQQMQSENVKPTEVTMVSLLSACAHLGAL 221
Query: 161 ------------------VVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVY 202
VV N++I + G ++ A VF + K+ W+ +I
Sbjct: 222 DMGEWIHGYIRTKRLKIDVVLGNALIDMYCKCGALEAAIDVFHGLSRKNIFCWNSIIVGL 281
Query: 203 ERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLV 254
G E I F +M+KEG++ + + + +LS C+ L G++ ++++
Sbjct: 282 GMNGRGEEAIAAFIVMEKEGIKPDGVTFVGILSGCSHSGLLSAGQRYFSEML 333
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/200 (20%), Positives = 89/200 (44%), Gaps = 12/200 (6%)
Query: 233 VLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKD 292
+L CA G H Q+++ F+ D+ + + L+ Y K G+L K +F +D
Sbjct: 16 ILRSCAISGEAQLGEAFHCQIMKMGFEYDMILQTGLLDFYAKVGDLKCAKRVFMGMPRRD 75
Query: 293 IVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFE 352
+V N++IS +++G E++ +F M + + +++ G + R +F+
Sbjct: 76 VVANNAMISALSKHGYVEEARNLFDNMTER----NSCSWNSMITCYCKLGDINSARLMFD 131
Query: 353 SMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKL 412
K +V + ++D ++ Q+ A +L M +++ W +++ A +++
Sbjct: 132 CNPVKDVVS-----WNAIIDGYCKSKQLVAAQELFLLMGSARNSVTWNTMISA---YVQC 183
Query: 413 DLAEVAAKKLLQLEPKNAGP 432
A Q++ +N P
Sbjct: 184 GEFGTAISMFQQMQSENVKP 203
>gi|347954518|gb|AEP33759.1| organelle transcript processing 82, partial [Brassica oleracea]
Length = 691
Score = 453 bits (1165), Expect = e-124, Method: Compositional matrix adjust.
Identities = 235/571 (41%), Positives = 354/571 (61%), Gaps = 12/571 (2%)
Query: 41 TVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVI 100
T ++ + R+ R++DAR++FD ++DVV+ T ++ GY G V R++FD + +++V+
Sbjct: 122 TSLISMYARNGRLEDARKVFDXSSQRDVVSCTALITGYASRGDVRSARKVFDXITERDVV 181
Query: 101 SWTTMISGYVNNNRIDVARKLFEVMPEKN----EVSWTAMLMGYTQCGRIQDAWELFKAM 156
SW MI+GYV N + A +LF+ M N E + ++L Q G I+ E+ +
Sbjct: 182 SWNAMITGYVENCGYEEALELFKEMMRTNVRPDEGTLVSVLSACAQSGSIELGREIHTLV 241
Query: 157 P-----MKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEV 211
S+ N+ I + G+V+ A +F+ + KD +W+ +I Y E
Sbjct: 242 DDHHGFGSSLKIVNAFIGLYSKCGDVEIASGLFEGLSCKDVVSWNTLIGGYTHMNLYKEA 301
Query: 212 IDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVA--SVLI 269
+ LF M + G N +++SVL CA L ++D GR +H + + V A + LI
Sbjct: 302 LLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNGSALRTSLI 361
Query: 270 TMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDV 329
MY KCG++ +F++ K + WN++I G+A +G + +F M +G+ PDD+
Sbjct: 362 DMYAKCGDIEAAHQVFNSMMHKSLSSWNAMIFGFAMHGRANAAFDLFSRMRKNGIEPDDI 421
Query: 330 TLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEA 389
TLVG+LSACS++G + GR IF+S+ Y + PK EHY CM+DLLG AG ++A ++I
Sbjct: 422 TLVGLLSACSHSGLLDLGRHIFKSVTQDYNITPKLEHYGCMIDLLGHAGLFKEAEEIIHM 481
Query: 390 MPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDV 449
MP EPD +IW SLL AC+ H L+LAE A+KL+++EP+N+G Y+LLSNIYA+ GR+ DV
Sbjct: 482 MPMEPDGVIWCSLLKACKMHGNLELAESFAQKLMEIEPENSGSYVLLSNIYATAGRWEDV 541
Query: 450 AELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGY 509
A +R+ + + + K PGCS IE++ VH F D + HP+ I RMLE++ LL EAG+
Sbjct: 542 ARIREVLNGKGMKKVPGCSSIEIDSVVHEFIIGDKL-HPQSREIYRMLEEMDVLLEEAGF 600
Query: 510 CPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKL 569
PD+S VL +++EE K +LR+HSEKLA+A+GL+ G + V+KNLRVC +CH A KL
Sbjct: 601 VPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTVVKNLRVCRNCHEATKL 660
Query: 570 ISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
ISK+ REI+ RD RFHHF+DG+CSC DYW
Sbjct: 661 ISKIYKREIVARDRTRFHHFRDGVCSCCDYW 691
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 129/498 (25%), Positives = 219/498 (43%), Gaps = 77/498 (15%)
Query: 25 AGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRV 84
A ++F E N++ W ML G S D+V+ M + G V
Sbjct: 36 AVSVFETXQEPNLLIWNTMLRGLASSS---------------DLVSPLEMYVRMVSXGHV 80
Query: 85 DEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLF-EVMP---EKNEVSWTAMLMGY 140
N ++ ++ + + R++ +VM E + + T+++ Y
Sbjct: 81 ------------PNAYTFPFLLKSCAKSKTFEEGRQIHAQVMKLGCELDRYAHTSLISMY 128
Query: 141 TQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIK 200
+ GR++DA ++F + VV+ ++I G G+V+ AR VFD + E+D +W+ MI
Sbjct: 129 ARNGRLEDARKVFDXSSQRDVVSCTALITGYASRGDVRSARKVFDXITERDVVSWNAMIT 188
Query: 201 VY-ERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQ-F 258
Y E GYE E ++LF M + VR + +L+SVLS CA S++ GR++H + F
Sbjct: 189 GYVENCGYE-EALELFKEMMRTNVRPDEGTLVSVLSACAQSGSIELGREIHTLVDDHHGF 247
Query: 259 DVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHE 318
+ + + I +Y KCG++ +F+ + KD+V WN++I GY L +++L +F E
Sbjct: 248 GSSLKIVNAFIGLYSKCGDVEIASGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQE 307
Query: 319 MFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYL-VEPKTEHYACMVDLLGRA 377
M SG P+DVT++ VL AC++ G + GR I + + V + ++D+ +
Sbjct: 308 MLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNGSALRTSLIDMYAKC 367
Query: 378 GQVEDAMKLIEAM----------------------------------PFEPDAIIWGSLL 403
G +E A ++ +M EPD I LL
Sbjct: 368 GDIEAAHQVFNSMMHKSLSSWNAMIFGFAMHGRANAAFDLFSRMRKNGIEPDDITLVGLL 427
Query: 404 GACRTHMKLDLAEVAAKKLLQ---LEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRN 460
AC LDL K + Q + PK Y + ++ G F + E+ M
Sbjct: 428 SACSHSGLLDLGRHIFKSVTQDYNITPK-LEHYGCMIDLLGHAGLFKEAEEIIHMMP--- 483
Query: 461 VIKPPGCSWIEVEKKVHM 478
++P G W + K M
Sbjct: 484 -MEPDGVIWCSLLKACKM 500
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 104/440 (23%), Positives = 182/440 (41%), Gaps = 89/440 (20%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDM 62
+R+VVS TA++ GY G + A +F + E++VVSW M+ G++ + ++A LF
Sbjct: 146 QRDVVSCTALITGYASRGDVRSARKVFDXITERDVVSWNAMITGYVENCGYEEALELFKE 205
Query: 63 MPEKDVVAQTNM---VLGYC-QDGRVDEGREI---------------------------- 90
M +V VL C Q G ++ GREI
Sbjct: 206 MMRTNVRPDEGTLVSVLSACAQSGSIELGREIHTLVDDHHGFGSSLKIVNAFIGLYSKCG 265
Query: 91 --------FDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVM----PEKNEVSWTAMLM 138
F+ + K+V+SW T+I GY + N A LF+ M N+V+ ++L
Sbjct: 266 DVEIASGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLP 325
Query: 139 GYTQCGRIQ-DAW-ELFKAMPMKSVVASNSMILGL----GQNGEVQKARVVFDQMREKDD 192
G I W ++ +K V +++ L + G+++ A VF+ M K
Sbjct: 326 ACAHLGAIDIGRWIHVYIDKRLKGVTNGSALRTSLIDMYAKCGDIEAAHQVFNSMMHKSL 385
Query: 193 ATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQ 252
++W+ MI + G DLF+ M+K G+ + +L+ +LS C+ LD GR +
Sbjct: 386 SSWNAMIFGFAMHGRANAAFDLFSRMRKNGIEPDDITLVGLLSACSHSGLLDLGRHIFKS 445
Query: 253 LVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKS 312
+ + D + + + +I GL +++
Sbjct: 446 VTQ------------------------------DYNITPKLEHYGCMIDLLGHAGLFKEA 475
Query: 313 LKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYL-VEPKTE-HYACM 370
++ H M + PD V +L AC G + E+ ES K + +EP+ Y +
Sbjct: 476 EEIIHMM---PMEPDGVIWCSLLKACKMHGNL----ELAESFAQKLMEIEPENSGSYVLL 528
Query: 371 VDLLGRAGQVEDAMKLIEAM 390
++ AG+ ED ++ E +
Sbjct: 529 SNIYATAGRWEDVARIREVL 548
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 79/186 (42%), Gaps = 22/186 (11%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFI----RDSRIDDA 56
M +++ SW AM+ G+ G A LF +M + + + L G + +D
Sbjct: 380 MMHKSLSSWNAMIFGFAMHGRANAAFDLFSRMRKNGIEPDDITLVGLLSACSHSGLLDLG 439
Query: 57 RRLF-------DMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMP-KKNVISWTTMISG 108
R +F ++ P+ + +LG+ G E EI MP + + + W +++
Sbjct: 440 RHIFKSVTQDYNITPKLEHYGCMIDLLGHA--GLFKEAEEIIHMMPMEPDGVIWCSLLKA 497
Query: 109 YVNNNRIDV----ARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAW---ELFKAMPMKSV 161
+ +++ A+KL E+ PE N S+ + Y GR +D E+ MK V
Sbjct: 498 CKMHGNLELAESFAQKLMEIEPE-NSGSYVLLSNIYATAGRWEDVARIREVLNGKGMKKV 556
Query: 162 VASNSM 167
+S+
Sbjct: 557 PGCSSI 562
>gi|356498444|ref|XP_003518062.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Glycine max]
Length = 634
Score = 453 bits (1165), Expect = e-124, Method: Compositional matrix adjust.
Identities = 242/604 (40%), Positives = 349/604 (57%), Gaps = 47/604 (7%)
Query: 43 MLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGR-VDEGREIFDEMPKKNVIS 101
+L I D+R+ +A + N VL C R + EG+ + M K + +
Sbjct: 32 VLNIHIHDTRLREALLHMALRGLDTNFQDYNTVLNECLRKRAIREGQRVHAHMIKTHYLP 91
Query: 102 W----TTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAM- 156
T +I YV + + AR +F+VMPE+N VSWTAM+ Y+Q G A LF M
Sbjct: 92 CVYLRTRLIVFYVKCDSLRDARHVFDVMPERNVVSWTAMISAYSQRGYASQALSLFVQML 151
Query: 157 -------------PMKSVVASNSMILG-------------------------LGQNGEVQ 178
+ S + S+ +LG ++G++
Sbjct: 152 RSGTEPNEFTFATVLTSCIGSSGFVLGRQIHSHIIKLNYEAHVYVGSSLLDMYAKDGKIH 211
Query: 179 KARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCA 238
+AR +F + E+D + + +I Y + G + E ++LF +Q+EG++ N+ + SVL+ +
Sbjct: 212 EARGIFQCLPERDVVSCTAIISGYAQLGLDEEALELFRRLQREGMQSNYVTYTSVLTALS 271
Query: 239 SLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNS 298
LA+LDHG+QVH L+R + V + + LI MY KCG L + IFD + ++ WN+
Sbjct: 272 GLAALDHGKQVHNHLLRSEVPSYVVLQNSLIDMYSKCGNLTYARRIFDTLHERTVISWNA 331
Query: 299 IISGYAQYGLGEKSLKVFHEMFSSG-VMPDDVTLVGVLSACSYTGKVKEGREIFESMKS- 356
++ GY+++G G + L++F+ M V PD VT++ VLS CS+ G +G +IF M S
Sbjct: 332 MLVGYSKHGEGREVLELFNLMIDENKVKPDSVTVLAVLSGCSHGGLEDKGMDIFYDMTSG 391
Query: 357 KYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAE 416
K V+P ++HY C+VD+LGRAG+VE A + ++ MPFEP A IWG LLGAC H LD+ E
Sbjct: 392 KISVQPDSKHYGCVVDMLGRAGRVEAAFEFVKKMPFEPSAAIWGCLLGACSVHSNLDIGE 451
Query: 417 VAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKV 476
+LLQ+EP+NAG Y++LSN+YAS GR+ DV LR M K+ V K PG SWIE+++ +
Sbjct: 452 FVGHQLLQIEPENAGNYVILSNLYASAGRWEDVRSLRNLMLKKAVTKEPGRSWIELDQVL 511
Query: 477 HMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKL 536
H F DC SHP + ++++ +EAGY PD S VLHDVDEE+K L HSEKL
Sbjct: 512 HTFHASDC-SHPRREEVSAKVQELSARFKEAGYVPDLSCVLHDVDEEQKEKILLSHSEKL 570
Query: 537 AVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSC 596
A+ +GL+ PE VPIRV+KNLR+C DCH+ K SK+ GRE+ LRD NRFH G CSC
Sbjct: 571 ALTFGLIATPESVPIRVIKNLRICVDCHNFAKYTSKIYGREVSLRDKNRFHRIVGGKCSC 630
Query: 597 RDYW 600
DYW
Sbjct: 631 GDYW 634
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/268 (29%), Positives = 139/268 (51%), Gaps = 21/268 (7%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM----PEKNVVSWTVML------GGFIRD 50
MPERNVVSWTAM+ Y + G ++A +LF QM E N ++ +L GF+
Sbjct: 119 MPERNVVSWTAMISAYSQRGYASQALSLFVQMLRSGTEPNEFTFATVLTSCIGSSGFVLG 178
Query: 51 SRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGY- 109
+I + + E V ++++ Y +DG++ E R IF +P+++V+S T +ISGY
Sbjct: 179 RQIHS--HIIKLNYEAHVYVGSSLLDMYAKDGKIHEARGIFQCLPERDVVSCTAIISGYA 236
Query: 110 ---VNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWE----LFKAMPMKSVV 162
++ +++ R+L + N V++T++L + + + L ++ VV
Sbjct: 237 QLGLDEEALELFRRLQREGMQSNYVTYTSVLTALSGLAALDHGKQVHNHLLRSEVPSYVV 296
Query: 163 ASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEG 222
NS+I + G + AR +FD + E+ +W+ M+ Y + G EV++LF LM E
Sbjct: 297 LQNSLIDMYSKCGNLTYARRIFDTLHERTVISWNAMLVGYSKHGEGREVLELFNLMIDEN 356
Query: 223 -VRVNFPSLISVLSVCASLASLDHGRQV 249
V+ + ++++VLS C+ D G +
Sbjct: 357 KVKPDSVTVLAVLSGCSHGGLEDKGMDI 384
>gi|294463969|gb|ADE77505.1| unknown [Picea sitchensis]
Length = 514
Score = 452 bits (1164), Expect = e-124, Method: Compositional matrix adjust.
Identities = 219/474 (46%), Positives = 311/474 (65%), Gaps = 1/474 (0%)
Query: 127 EKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQ 186
E + V TA++ Y +CG ++DA +F M +S N+MI G QN +++KA +F +
Sbjct: 42 ESDVVVQTALVHMYARCGSLEDAGHVFDKMSERSTRTWNAMITGHAQNRDMKKALKLFYE 101
Query: 187 MREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHG 246
M E+D +W+ +I Y + GY E +++F M+K G++ + + SVLS CA LA+L+ G
Sbjct: 102 MSERDVVSWTAVIAGYAQNGYGDESLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELG 161
Query: 247 RQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQY 306
RQ HA +V+ F +D+ V S L+ MY K G + +FD ++ V WNSII+G AQ+
Sbjct: 162 RQFHAYVVQSGFALDIVVGSALVDMYAKSGSMEDACQVFDKMPQRNEVSWNSIITGCAQH 221
Query: 307 GLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEH 366
G G ++ +F +M +G+ P++++ VGVLSACS+TG V EGR F M Y + P H
Sbjct: 222 GRGNDAVLLFEQMLQAGIKPNEISFVGVLSACSHTGLVNEGRGYFNLMTQNYGIVPDVSH 281
Query: 367 YACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLE 426
Y CM+DLLGRAG +++A I MP EPD +WG+LLGACR H +LA+ A+ LL +E
Sbjct: 282 YTCMIDLLGRAGCLDEAENFINGMPVEPDVSVWGALLGACRIHGNTELAKRIAEHLLGME 341
Query: 427 PKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVS 486
+ AG Y+LLSNIYA+ G++ D A++RK M+ R V+K PG SWIEV+ +H F + S
Sbjct: 342 VQIAGIYVLLSNIYAAAGQWDDAAKVRKLMKDRGVMKQPGYSWIEVKTIMHAFVAGE-TS 400
Query: 487 HPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLP 546
HP+ I LE + ++ AGY P+ +FVL DV+++EK SL +HSEKLA+A+G++
Sbjct: 401 HPQLKEIHEFLESLSRKMKAAGYVPNKNFVLQDVEDDEKELSLSHHSEKLAIAFGIINTN 460
Query: 547 EGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
G IRV KNLRVCGDCH+ IK IS R+I++RDANRFHHFKDG CSC DYW
Sbjct: 461 PGTTIRVAKNLRVCGDCHTVIKFISLNFTRKIVVRDANRFHHFKDGRCSCGDYW 514
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 125/239 (52%), Gaps = 35/239 (14%)
Query: 218 MQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGE 277
M +GV+ N +L +V+ CAS+ASL+ G+Q H +++ F+ DV V + L+ MY +CG
Sbjct: 1 MVGKGVKPNQFTLSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGS 60
Query: 278 LVKGKLIFDN-------------------------------FASKDIVMWNSIISGYAQY 306
L +FD + +D+V W ++I+GYAQ
Sbjct: 61 LEDAGHVFDKMSERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQN 120
Query: 307 GLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFES-MKSKYLVEPKTE 365
G G++SL VF++M +G+ D + VLSAC+ ++ GR+ ++S + ++
Sbjct: 121 GYGDESLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALDIVVG 180
Query: 366 HYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQ 424
+ +VD+ ++G +EDA ++ + MP + + + W S++ C H + + A + +++LQ
Sbjct: 181 --SALVDMYAKSGSMEDACQVFDKMP-QRNEVSWNSIITGCAQHGRGNDAVLLFEQMLQ 236
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 129/255 (50%), Gaps = 13/255 (5%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDM 62
E +VV TA+V Y G + +AG +F +M E++ +W M+ G ++ + A +LF
Sbjct: 42 ESDVVVQTALVHMYARCGSLEDAGHVFDKMSERSTRTWNAMITGHAQNRDMKKALKLFYE 101
Query: 63 MPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVIS----WTTMISGYVNNNRIDVA 118
M E+DVV+ T ++ GY Q+G DE +F++M K + S +++S + +++
Sbjct: 102 MSERDVVSWTAVIAGYAQNGYGDESLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELG 161
Query: 119 RKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQN 174
R+ + + + V +A++ Y + G ++DA ++F MP ++ V+ NS+I G Q+
Sbjct: 162 RQFHAYVVQSGFALDIVVGSALVDMYAKSGSMEDACQVFDKMPQRNEVSWNSIITGCAQH 221
Query: 175 GEVQKARVVFDQMREK----DDATWSGMIKVYERKGYELEVIDLFTLM-QKEGVRVNFPS 229
G A ++F+QM + ++ ++ G++ G E F LM Q G+ +
Sbjct: 222 GRGNDAVLLFEQMLQAGIKPNEISFVGVLSACSHTGLVNEGRGYFNLMTQNYGIVPDVSH 281
Query: 230 LISVLSVCASLASLD 244
++ + LD
Sbjct: 282 YTCMIDLLGRAGCLD 296
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 109/228 (47%), Gaps = 39/228 (17%)
Query: 59 LFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVA 118
+ M E DVV QT +V Y + G +++ +FD+M +++ +W MI+G+ N + A
Sbjct: 36 IIKMGFESDVVVQTALVHMYARCGSLEDAGHVFDKMSERSTRTWNAMITGHAQNRDMKKA 95
Query: 119 RKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAM---PMKS--------------- 160
KLF M E++ VSWTA++ GY Q G ++ +F M MKS
Sbjct: 96 LKLFYEMSERDVVSWTAVIAGYAQNGYGDESLNVFNQMRKTGMKSDRFIMGSVLSACADL 155
Query: 161 ---------------------VVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMI 199
+V ++++ ++G ++ A VFD+M ++++ +W+ +I
Sbjct: 156 AALELGRQFHAYVVQSGFALDIVVGSALVDMYAKSGSMEDACQVFDKMPQRNEVSWNSII 215
Query: 200 KVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGR 247
+ G + + LF M + G++ N S + VLS C+ ++ GR
Sbjct: 216 TGCAQHGRGNDAVLLFEQMLQAGIKPNEISFVGVLSACSHTGLVNEGR 263
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 114/223 (51%), Gaps = 17/223 (7%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
M ER+ +W AM+ G+ + + +A LF++M E++VVSWT ++ G+ ++ D++ +F
Sbjct: 71 MSERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQNGYGDESLNVF 130
Query: 61 DMMPEKDVVAQ---TNMVLGYCQD-GRVDEGREIFDEMPKK----NVISWTTMISGYVNN 112
+ M + + + VL C D ++ GR+ + + +++ + ++ Y +
Sbjct: 131 NQMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALDIVVGSALVDMYAKS 190
Query: 113 NRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGL- 171
++ A ++F+ MP++NEVSW +++ G Q GR DA LF+ M + + +G+
Sbjct: 191 GSMEDACQVFDKMPQRNEVSWNSIITGCAQHGRGNDAVLLFEQMLQAGIKPNEISFVGVL 250
Query: 172 ---GQNGEVQKARVVFDQMREK-----DDATWSGMIKVYERKG 206
G V + R F+ M + D + ++ MI + R G
Sbjct: 251 SACSHTGLVNEGRGYFNLMTQNYGIVPDVSHYTCMIDLLGRAG 293
>gi|297740529|emb|CBI30711.3| unnamed protein product [Vitis vinifera]
Length = 697
Score = 452 bits (1164), Expect = e-124, Method: Compositional matrix adjust.
Identities = 235/621 (37%), Positives = 366/621 (58%), Gaps = 37/621 (5%)
Query: 16 YVEEGMITEAGTLFWQMPEKNV--VSWTVMLGGFIRDSRIDDARRLFDMMPEKDV----V 69
+ E G + A L Q P+ ++ ++ +L I D RR+ ++ DV V
Sbjct: 78 FCELGNLRRAMELINQSPKPDLELRTYCSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGV 137
Query: 70 AQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGY--VNN--------------- 112
+ +V Y G + EGR IFD++ + V W +++GY + N
Sbjct: 138 LGSKLVFMYVTCGDLREGRRIFDKVANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELG 197
Query: 113 -NRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSV---------- 161
R++ ARKLF+ + +++ +SW +M+ GY G + +LF+ M + +
Sbjct: 198 IRRVESARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSV 257
Query: 162 --VASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQ 219
+N ++ ++G + A VF+ M E+ +W+ MI Y R+G + LF M+
Sbjct: 258 ELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEME 317
Query: 220 KEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELV 279
KE + N ++ +L CASLA+L+ G+++H ++R F +D +VA+ L+ MY+KCG L
Sbjct: 318 KEDLFPNSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALG 377
Query: 280 KGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACS 339
+L+FD KD+V W +I+GY +G G +++ F+EM +SG+ PD+V+ + +L ACS
Sbjct: 378 LARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACS 437
Query: 340 YTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIW 399
++G + EG F M++ +EPK+EHYAC+VDLL RAG + A K I+ MP EPDA IW
Sbjct: 438 HSGLLDEGWGFFNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDATIW 497
Query: 400 GSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKR 459
G+LL CR + + LAE A+ + +LEP+N G Y+LL+NIYA ++ +V +LR+ + +R
Sbjct: 498 GALLCGCRIYHDVKLAEKVAEHVFELEPENTGYYVLLANIYAEAEKWEEVKKLRERIGRR 557
Query: 460 NVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHD 519
+ K PGCSWIE++ KVH+F D SHP I +L+K ++E G+ P + L
Sbjct: 558 GLRKNPGCSWIEIKGKVHIFVTGDS-SHPLANKIELLLKKTRTRMKEEGHFPKMRYALIK 616
Query: 520 VDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREII 579
D+ EK +L HSEK+A+A+G++ LP G +RV KNLRVCGDCH K +SK++ R+II
Sbjct: 617 ADDTEKEMALCGHSEKIAMAFGILSLPPGKTVRVTKNLRVCGDCHEMAKFMSKMVKRDII 676
Query: 580 LRDANRFHHFKDGLCSCRDYW 600
LRD+NRFHHFKDG CSCR +W
Sbjct: 677 LRDSNRFHHFKDGSCSCRGHW 697
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/362 (24%), Positives = 152/362 (41%), Gaps = 69/362 (19%)
Query: 6 VVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPE 65
V W ++ GY + G E+ +LF +M E + R++ AR+LFD + +
Sbjct: 167 VFLWNLLMNGYAKIGNFRESLSLFKRMRELGI-------------RRVESARKLFDELGD 213
Query: 66 KDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNV-ISWTTMIS-----------GYVNNN 113
+DV++ +M+ GY +G ++G ++F++M + TM+S Y +
Sbjct: 214 RDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVELTLNNCLLDMYSKSG 273
Query: 114 RIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAM----------PMKSVVA 163
++ A ++FE M E++ VSWT+M+ GY + G + LF M M ++
Sbjct: 274 NLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEDLFPNSITMACILP 333
Query: 164 SNSMILGLGQNGEVQK-----------------------------ARVVFDQMREKDDAT 194
+ + + L + E+ AR++FD + EKD +
Sbjct: 334 ACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKDLVS 393
Query: 195 WSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLV 254
W+ MI Y GY E I F M+ G+ + S IS+L C+ LD G +
Sbjct: 394 WTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLDEGWGFFNMMR 453
Query: 255 -RCQFDVDVYVASVLITMYIKCGELVKG-KLIFDNFASKDIVMWNSIISG---YAQYGLG 309
C + + ++ + + G L K K I D +W +++ G Y L
Sbjct: 454 NNCCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDATIWGALLCGCRIYHDVKLA 513
Query: 310 EK 311
EK
Sbjct: 514 EK 515
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 115/245 (46%), Gaps = 26/245 (10%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM-------PEKNVVSWTVMLGGFIRD--- 50
+ +R+V+SW +M+ GYV G+ + LF QM +VS + L + D
Sbjct: 211 LGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVELTLNNCLLDMYS 270
Query: 51 --SRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKK----NVISWTT 104
++ A ++F+ M E+ VV+ T+M+ GY ++G D +F EM K+ N I+
Sbjct: 271 KSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEDLFPNSITMAC 330
Query: 105 MISGYVNNNRIDVARKLFEVMPEKNEVSW-----TAMLMGYTQCGRIQDAWELFKAMPMK 159
++ + ++ +++ + +N S A++ Y +CG + A LF +P K
Sbjct: 331 ILPACASLAALERGQEIHGHIL-RNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEK 389
Query: 160 SVVASNSMILGLGQNGEVQKARVVFDQMR----EKDDATWSGMIKVYERKGYELEVIDLF 215
+V+ MI G G +G +A F++MR E D+ ++ ++ G E F
Sbjct: 390 DLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLDEGWGFF 449
Query: 216 TLMQK 220
+M+
Sbjct: 450 NMMRN 454
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 94/244 (38%), Gaps = 72/244 (29%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLG--------------- 45
M ER+VVSWT+M+ GY EG+ + LF +M ++++ ++ +
Sbjct: 285 MGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEDLFPNSITMACILPACASLAALERG 344
Query: 46 ----------GFIRDSRIDD--------------ARRLFDMMPEKDVVAQTNMVLGYCQD 81
GF D + + AR LFDM+PEKD+V+ T M+ GY
Sbjct: 345 QEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGYGMH 404
Query: 82 GRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYT 141
G E F+EM + E +EVS+ ++L +
Sbjct: 405 GYGSEAIAAFNEMRNSGI---------------------------EPDEVSFISILYACS 437
Query: 142 QCGRIQDAWELFKAMPMKSVVASNS-----MILGLGQNGEVQKARVVFDQMREKDDAT-W 195
G + + W F M + S ++ L + G + KA M + DAT W
Sbjct: 438 HSGLLDEGWGFFNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDATIW 497
Query: 196 SGMI 199
++
Sbjct: 498 GALL 501
>gi|357519251|ref|XP_003629914.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523936|gb|AET04390.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 727
Score = 452 bits (1163), Expect = e-124, Method: Compositional matrix adjust.
Identities = 238/646 (36%), Positives = 362/646 (56%), Gaps = 47/646 (7%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPE--KNVVSWTVMLGGFIRDSRIDDARR 58
+P +V +T ++ Y + EA LF Q+P K+ +SW ++ I + A +
Sbjct: 83 IPSPHVSLYTKLLLAYAHNNNLHEAINLFNQIPSNTKDTISWNSVIKASIICNDFVTAVK 142
Query: 59 LFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMP--KKNVISWTTMISGYVNNNRID 116
LFD MP+++ ++ T ++ G+ GRV+E F+ MP K+V +W M++GY NN R++
Sbjct: 143 LFDEMPQRNSISWTTIIHGFLSTGRVNEAERFFNAMPYVDKDVATWNAMVNGYCNNGRVN 202
Query: 117 VARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVV--ASNSMILGLGQN 174
A +LF MP ++ +SWT++++G + G+ A FK M S V +S +++ GL
Sbjct: 203 DALRLFCQMPSRDVISWTSIIVGLDRNGKSYQALFFFKNMVGFSGVGISSTTLVCGLSAA 262
Query: 175 GEV----------------------------------------QKARVVFDQMREKDDAT 194
++ A VF + K+
Sbjct: 263 AKILDFYAGIQIHCCMFKFGFCCGLDEFVSASLVTFYASCKRMGDACKVFGETVCKNVVV 322
Query: 195 WSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLV 254
W+ ++ +E +++F+ M + V N S S L+ C L L+ GR +HA +
Sbjct: 323 WTALLTGCGLNDKHVEALEVFSEMMRFNVVPNESSFTSALNSCVGLEDLEKGRVIHAAGI 382
Query: 255 RCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLK 314
+ + VY + L+ MY KCG + +F K++V WNS+I G AQ+G G +L
Sbjct: 383 KMGLENAVYTGNSLVVMYSKCGFIGDALCVFKGICEKNVVSWNSVIVGCAQHGCGTWALV 442
Query: 315 VFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLL 374
+F EM GV D++TL G+LSACS +G +++ R F K ++ EHYACMVD+L
Sbjct: 443 LFKEMLREGVESDEITLTGLLSACSRSGMLQKARCFFGYFARKRSMKLTVEHYACMVDVL 502
Query: 375 GRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYI 434
GR G+VE+A L +MP E ++++W LL ACR H LD+AE AAK++ ++EP + Y+
Sbjct: 503 GRCGEVEEAEALATSMPVEANSMVWLVLLSACRVHSSLDVAERAAKRIFEMEPDCSAAYV 562
Query: 435 LLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIM 494
LLSN+YAS R+ +VA +R M+ ++K PG SWI ++ H F D SHP I
Sbjct: 563 LLSNLYASSRRWLEVARIRMKMKHNGIVKQPGSSWITLKGMRHEFLSAD-RSHPLTEEIY 621
Query: 495 RMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVM 554
L +G LRE GY PD F LHDV+ E+ L YHSE+LA+A+GL+ EG I +M
Sbjct: 622 EKLVWLGVKLRELGYIPDQQFALHDVEIEQNEEMLSYHSERLAIAFGLLSTVEGSTITIM 681
Query: 555 KNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
KNLRVCGDCH+AI L++K++ REI++RD++RFHHFK+G+CSC DYW
Sbjct: 682 KNLRVCGDCHTAITLMAKIVNREIVVRDSSRFHHFKNGICSCGDYW 727
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 59/279 (21%), Positives = 106/279 (37%), Gaps = 30/279 (10%)
Query: 157 PMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFT 216
P S + N L +N ++ AR VF+++ + ++ ++ Y E I+LF
Sbjct: 53 PKSSSTSLNFTFLNHLKNQKLDSARAVFNKIPSPHVSLYTKLLLAYAHNNNLHEAINLFN 112
Query: 217 LMQKEGV-RVNFPSLISVLSVC------------------ASLASLDHGRQVHAQLVRCQ 257
+ +++ S+I +C S ++ HG ++ +
Sbjct: 113 QIPSNTKDTISWNSVIKASIICNDFVTAVKLFDEMPQRNSISWTTIIHGFLSTGRVNEAE 172
Query: 258 --------FDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLG 309
D DV + ++ Y G + +F S+D++ W SII G + G
Sbjct: 173 RFFNAMPYVDKDVATWNAMVNGYCNNGRVNDALRLFCQMPSRDVISWTSIIVGLDRNGKS 232
Query: 310 EKSLKVFHEMFS-SGVMPDDVTLVGVLSACSYTGKVKEGREIFESM-KSKYLVEPKTEHY 367
++L F M SGV TLV LSA + G +I M K +
Sbjct: 233 YQALFFFKNMVGFSGVGISSTTLVCGLSAAAKILDFYAGIQIHCCMFKFGFCCGLDEFVS 292
Query: 368 ACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGAC 406
A +V ++ DA K+ + + ++W +LL C
Sbjct: 293 ASLVTFYASCKRMGDACKVFGETVCK-NVVVWTALLTGC 330
>gi|147801171|emb|CAN62238.1| hypothetical protein VITISV_014689 [Vitis vinifera]
Length = 957
Score = 452 bits (1163), Expect = e-124, Method: Compositional matrix adjust.
Identities = 246/643 (38%), Positives = 371/643 (57%), Gaps = 48/643 (7%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF---- 60
NV A++ Y G + EA +F+ M + + +SW ML GF+++ +A + +
Sbjct: 316 NVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMR 375
Query: 61 DMMPEKDVVAQTNMVLGYCQDGRVDEGREI------------------------------ 90
D + D+VA +++ + G G +I
Sbjct: 376 DAGQKPDLVAVISIIAASARSGNTLHGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMK 435
Query: 91 -----FDEMPKKNVISWTTMISGYVNNNRIDVARKLF-EVMPEKNEVS---WTAMLMGYT 141
FD+MP K+V+SWTT+I+G+ N A +LF EV E ++ +++L+ +
Sbjct: 436 YMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACS 495
Query: 142 QCGRIQDAWELFKAMPMKSV---VASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGM 198
I E+ + K + V N ++ G+ G V A +F+ + KD +W+ M
Sbjct: 496 GLKLISSVKEIHSYIIRKGLSDLVLQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSM 555
Query: 199 IKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQF 258
I Y G E ++LF LM++ GV + SL+S+LS ASL++L G+++H L+R F
Sbjct: 556 ISCYVHNGLANEALELFHLMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRKGF 615
Query: 259 DVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHE 318
++ +AS L+ MY +CG L K + +F+ +KD+V+W S+I+ Y +G G ++ +F
Sbjct: 616 VLEGSLASTLVDMYARCGTLEKSRNVFNFIRNKDLVLWTSMINAYGMHGCGRAAIDLFRR 675
Query: 319 MFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAG 378
M + PD + V VL ACS++G + EGR ESMK +Y +EP EHYAC+VDLLGRA
Sbjct: 676 MEDESIAPDHIAFVAVLYACSHSGLMNEGRRFLESMKYEYQLEPWPEHYACLVDLLGRAN 735
Query: 379 QVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSN 438
+E+A + ++ M EP A +W +LLGAC+ H +L E+AA+KLL+++P+N G Y+L+SN
Sbjct: 736 HLEEAYQFVKGMEVEPTAEVWCALLGACQIHSNKELGEIAAQKLLEMDPENPGNYVLVSN 795
Query: 439 IYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLE 498
+Y+++ R+ DV +R M+ + K PGCSWIEV KVH F RD SHP+ I L
Sbjct: 796 VYSAERRWKDVEXVRMRMKASGLKKNPGCSWIEVGNKVHTFMARD-KSHPQSYEIYSKLS 854
Query: 499 KIG-GLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNL 557
+I L +E GY + FVLH+ EEEKV L HSE+LA+AYG++ PEG +R+ KNL
Sbjct: 855 QITEKLAKEGGYVAQTKFVLHNAKEEEKVQMLYGHSERLAIAYGMLTTPEGASLRITKNL 914
Query: 558 RVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
RVCGDCH+ KLISK RE+++RDANRFHHFK G+CSC D W
Sbjct: 915 RVCGDCHNFCKLISKFFERELVMRDANRFHHFKGGVCSCGDVW 957
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 111/429 (25%), Positives = 209/429 (48%), Gaps = 21/429 (4%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV----VSWTVMLG--GFIRDSRID 54
MP + + +W AM+ YV G + L+ +M + ++ +L G ++D R
Sbjct: 140 MPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKACGLLKDRRYG 199
Query: 55 -DARRLFDMMPEKDVVAQTNMVLG-YCQDGRVDEGREIFDEMPKK-NVISWTTMISGYVN 111
+ L +V N ++G Y + ++ R++FD MP+K +V+SW +MIS Y +
Sbjct: 200 AEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSS 259
Query: 112 NNRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAW----ELFKAMPMKSVVA 163
N + A +LF M + N ++ A L I+ + K+ +V
Sbjct: 260 NGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFV 319
Query: 164 SNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGV 223
+N++I + G++ +A +F M + D +W+ M+ + + G E + + M+ G
Sbjct: 320 ANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQ 379
Query: 224 RVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKL 283
+ + ++IS+++ A + HG Q+HA ++ D D+ V + L+ MY K +
Sbjct: 380 KPDLVAVISIIAASARSGNTLHGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDC 439
Query: 284 IFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGK 343
IFD KD+V W +II+G+AQ G ++L++F E+ G+ D + + +L ACS
Sbjct: 440 IFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKL 499
Query: 344 VKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
+ +EI + K L + ++ +VD+ G G V+ A ++ E + F+ D + W S++
Sbjct: 500 ISSVKEIHSYIIRKGLSDLVLQN--GIVDVYGECGNVDYAARMFELIEFK-DVVSWTSMI 556
Query: 404 GACRTHMKL 412
+C H L
Sbjct: 557 -SCYVHNGL 564
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 91/352 (25%), Positives = 175/352 (49%), Gaps = 17/352 (4%)
Query: 66 KDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVM 125
V T +V Y + G + + ++FD MP K + +W MI YV N + +L+ M
Sbjct: 112 NSVFLSTRLVFMYGKCGCLVDAEKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSLELYREM 171
Query: 126 PEK----NEVSWTAMLMGYTQCGRIQD---AWEL----FKAMPMKSVVASNSMILGLGQN 174
+ ++ +L CG ++D E+ K + V +NS++ +
Sbjct: 172 RVSGIPLDACTFPCIL---KACGLLKDRRYGAEVHGLAIKEGYVSIVFVANSIVGMYTKC 228
Query: 175 GEVQKARVVFDQMREKDDA-TWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISV 233
++ AR +FD+M EK+D +W+ MI Y G +E + LF MQK + N + ++
Sbjct: 229 NDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAA 288
Query: 234 LSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDI 293
L C + + G +HA +++ + ++V+VA+ LI MY + G++ + IF N D
Sbjct: 289 LQACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDT 348
Query: 294 VMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFES 353
+ WNS++SG+ Q GL ++L+ +HEM +G PD V ++ +++A + +G G +I +
Sbjct: 349 ISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLHGMQI-HA 407
Query: 354 MKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
K ++ + +VD+ + ++ + + MP + D + W +++
Sbjct: 408 YAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMP-DKDVVSWTTIIAG 458
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 128/263 (48%), Gaps = 15/263 (5%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSR----IDDA 56
MP+++VVSWT ++ G+ + G + A LF ++ + + +M+ + I
Sbjct: 444 MPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLISSV 503
Query: 57 RRLFDMMPEK---DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNN 113
+ + + K D+V Q +V Y + G VD +F+ + K+V+SWT+MIS YV+N
Sbjct: 504 KEIHSYIIRKGLSDLVLQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHNG 563
Query: 114 RIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMIL 169
+ A +LF +M E + +S ++L ++ E+ + K V S+
Sbjct: 564 LANEALELFHLMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLAS 623
Query: 170 GL----GQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRV 225
L + G ++K+R VF+ +R KD W+ MI Y G IDLF M+ E +
Sbjct: 624 TLVDMYARCGTLEKSRNVFNFIRNKDLVLWTSMINAYGMHGCGRAAIDLFRRMEDESIAP 683
Query: 226 NFPSLISVLSVCASLASLDHGRQ 248
+ + ++VL C+ ++ GR+
Sbjct: 684 DHIAFVAVLYACSHSGLMNEGRR 706
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 89/176 (50%), Gaps = 4/176 (2%)
Query: 232 SVLSVCASLASLDHGRQVHAQLVRCQFDVD-VYVASVLITMYIKCGELVKGKLIFDNFAS 290
SVL +C S +L G+QVHA ++ + V++++ L+ MY KCG LV + +FD
Sbjct: 83 SVLELCGSKKALSEGQQVHAHMITSNALFNSVFLSTRLVFMYGKCGCLVDAEKLFDGMPH 142
Query: 291 KDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREI 350
K I WN++I Y G SL+++ EM SG+ D T +L AC + G E+
Sbjct: 143 KTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKACGLLKDRRYGAEV 202
Query: 351 FE-SMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
++K Y+ + +V + + + A +L + MP + D + W S++ A
Sbjct: 203 HGLAIKEGYVSIVFVAN--SIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISA 256
>gi|302802806|ref|XP_002983157.1| hypothetical protein SELMODRAFT_117419 [Selaginella moellendorffii]
gi|300149310|gb|EFJ15966.1| hypothetical protein SELMODRAFT_117419 [Selaginella moellendorffii]
Length = 704
Score = 452 bits (1163), Expect = e-124, Method: Compositional matrix adjust.
Identities = 232/628 (36%), Positives = 362/628 (57%), Gaps = 35/628 (5%)
Query: 2 PERNVVSWTAMVRGYVEEGMITEA-GTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
PE NV+SW A++ GY + MI EA G +F +MP + VSW +L + + + AR F
Sbjct: 83 PEHNVISWNALITGYSDNRMIPEAKGVIFDEMPRREEVSWNALLSAYAQAGHVHLARSTF 142
Query: 61 DMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARK 120
+ MP DVVA T ++ Q+G+++E ++D +P++++++WT +I Y N ++ +++
Sbjct: 143 ERMPRHDVVAWTALIAVSGQNGQLEEAEVLYDLIPERDLVAWTALIQAYGVNGQLTESKR 202
Query: 121 LFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKA 180
++ +MPE+N VS TAM++ Y+Q G + A ++ +P SMI+ QNG ++ A
Sbjct: 203 VYALMPERNRVSHTAMIIAYSQNGEVVQARKMLDTLPDPDQSTRTSMIVAYAQNGYIKDA 262
Query: 181 RVVFDQMREKDDATWSGMIKVYERKGYELEVIDLF-TLMQKEGVRVNFPSLISVLSVCAS 239
R +FD ++ D + M++ Y +F ++ QK V N ++++ A
Sbjct: 263 REMFDSIKNPDVIACNAMMEAYSSAQMLDHAKAMFDSIKQKTLVSWN-----TMVAAYAQ 317
Query: 240 LASLDHGRQV-----HAQLVRCQFDV----------------------DVYVASVLITMY 272
+LD + + H +V V D + ++ M
Sbjct: 318 AGNLDEAKSIFDSIPHKNVVSHNVMVVAYAHNMDLAEARRIFYSMDEKDTVTWTAMVAML 377
Query: 273 IKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLV 332
+ G L + + +F +++V WNS+I+G A G G +++ + M + G PD +T +
Sbjct: 378 AQHGRLAEAQELFAKMPYRNVVSWNSLIAGMASCGHGMAAVRYLYVMRNEGAKPDHITFM 437
Query: 333 GVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPF 392
G+L ACS+ G V+EG F SM+ + + P EHY MVD+LGRAGQ+ A +L+E MPF
Sbjct: 438 GILIACSHVGLVEEGWTHFTSMQGDHGLIPWREHYCRMVDVLGRAGQLGAARELLETMPF 497
Query: 393 EPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAEL 452
PD WGSLLG+C+TH + L AA+ LLQ + +++GPY+LL+N+Y+S GR D +
Sbjct: 498 IPDVGAWGSLLGSCKTHSDVKLGTRAAESLLQFDDQSSGPYVLLANMYSSVGRVADALAV 557
Query: 453 RKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPD 512
R M+ R V K PG S I V+ +H F + SHP H I+ L ++ L+++AGY PD
Sbjct: 558 RNRMKARGVKKQPGVSLIRVDGVLHRFVAGEA-SHPRHQEILSELSRLQELMKKAGYQPD 616
Query: 513 SSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISK 572
+ VLH V +EEK L YHSEKLA+A+ + G PIR+MKNLRVC DCH+A K +SK
Sbjct: 617 TKAVLHSVLDEEKEVLLSYHSEKLAIAFASIACEPGTPIRIMKNLRVCSDCHTATKFLSK 676
Query: 573 VMGREIILRDANRFHHFKDGLCSCRDYW 600
++ REII+RD RFH+F++G CSC DYW
Sbjct: 677 LLQREIIVRDGYRFHNFENGTCSCGDYW 704
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 91/219 (41%), Gaps = 29/219 (13%)
Query: 269 ITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEM--FSSG--- 323
+ +Y + G+L K IFD S ++V WNS+I+G++Q+G + ++F M +SS
Sbjct: 1 MQVYSENGDLGSAKAIFDQIPSHNVVSWNSLIAGFSQHGFMSNADEIFARMPRWSSSSWN 60
Query: 324 ----------------VMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEH- 366
M D V+S + + R I E+ + P+ E
Sbjct: 61 SMITGYAQSGDLAGATAMFDRTPEHNVISWNALITGYSDNRMIPEAKGVIFDEMPRREEV 120
Query: 367 -YACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQL 425
+ ++ +AG V A E MP D + W +L+ + +L+ AEV L L
Sbjct: 121 SWNALLSAYAQAGHVHLARSTFERMP-RHDVVAWTALIAVSGQNGQLEEAEV----LYDL 175
Query: 426 EP-KNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIK 463
P ++ + L Y G+ + + M +RN +
Sbjct: 176 IPERDLVAWTALIQAYGVNGQLTESKRVYALMPERNRVS 214
>gi|302793246|ref|XP_002978388.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
gi|300153737|gb|EFJ20374.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
Length = 687
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 230/618 (37%), Positives = 359/618 (58%), Gaps = 19/618 (3%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEK----NVVSWTVMLGGFIRDSRIDDA 56
MP R+V +W +M+ Y EA +F +M + + V++ +L + +
Sbjct: 71 MPCRSVGTWNSMISAYSISERSGEAFFIFQRMQHEGERCDRVTFLSILDACVNPENLQHG 130
Query: 57 RRLFDMMPEK----DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+ + + + E D+ T ++ Y + + ++F M +KN+I+W+ +I+ + ++
Sbjct: 131 KHVRESISETSFELDLFVGTALITMYARCRSPENAAQVFGRMKQKNLITWSAIITAFADH 190
Query: 113 NRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSM- 167
A + F +M ++ N V++ ++L G+T +++ + + + + +M
Sbjct: 191 GHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSRIHLLITEHGLDDTTTMS 250
Query: 168 -----ILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEG 222
+ G + GE+ A V+ +M E+ W+ +I Y G E ++ + +Q E
Sbjct: 251 NALVNVYGRCETGELDVAEVILQEMDEQQITAWNVLINGYTLHGRSREALETYQRLQLEA 310
Query: 223 VRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGK 282
+ V+ + ISVL+ C S SL G+ +H+ V C D DV V + L MY KCG + +
Sbjct: 311 IPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSDVIVKNALTNMYSKCGSMENAR 370
Query: 283 LIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTG 342
IFD+ + V WN ++ YAQ+G E+ LK+ +M GV + +T V VLS+CS+ G
Sbjct: 371 RIFDSMPIRSAVSWNGMLQAYAQHGESEEVLKLIRKMEQEGVKLNGITFVSVLSSCSHAG 430
Query: 343 KVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSL 402
+ EG + F S+ +E KTEHY C+VDLLGRAG++++A K I MP EP+ + W SL
Sbjct: 431 LIAEGCQYFHSLGHDRGIEVKTEHYGCLVDLLGRAGKLQEAEKYISKMPSEPEIVTWASL 490
Query: 403 LGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVI 462
LGACR H LD ++AA+KLL+L+P N+ ++LSNIY+ +G + + A+LR+ M R V
Sbjct: 491 LGACRVHKDLDRGKLAARKLLELDPGNSSASVVLSNIYSERGDWKNAAKLRRAMASRRVK 550
Query: 463 KPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDE 522
K PG S I+V+ KVH F RD SHP I +E++ +REAGY PD+ VLHDVDE
Sbjct: 551 KVPGISSIQVKNKVHEFRVRD-TSHPRAAEIYDKVEELCFAMREAGYVPDTKMVLHDVDE 609
Query: 523 EEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRD 582
E+K L YHSEKLA+A+GL+ PE + + KNLRVC DCH+A K ISK+ GREI++RD
Sbjct: 610 EQKESLLAYHSEKLAIAFGLISTPEKSSLHIFKNLRVCEDCHTATKFISKITGREIVVRD 669
Query: 583 ANRFHHFKDGLCSCRDYW 600
+RFHHF+DG CSC+DYW
Sbjct: 670 NHRFHHFRDGSCSCKDYW 687
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/358 (24%), Positives = 175/358 (48%), Gaps = 22/358 (6%)
Query: 67 DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMP 126
DV T +V Y + G + + R++FD MP ++V +W +MIS Y + R A +F+ M
Sbjct: 44 DVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQ 103
Query: 127 EKNE----VSWTAMLMGYTQCGRIQDAWELFKAMPMKS----VVASNSMILGLGQNGEVQ 178
+ E V++ ++L +Q + +++ S + ++I + +
Sbjct: 104 HEGERCDRVTFLSILDACVNPENLQHGKHVRESISETSFELDLFVGTALITMYARCRSPE 163
Query: 179 KARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCA 238
A VF +M++K+ TWS +I + G+ E + F +MQ+EG+ N + IS+L+
Sbjct: 164 NAAQVFGRMKQKNLITWSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFT 223
Query: 239 SLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKC--GELVKGKLIFDNFASKDIVMW 296
+ + L+ ++H + D +++ L+ +Y +C GEL ++I + I W
Sbjct: 224 TPSGLEELSRIHLLITEHGLDDTTTMSNALVNVYGRCETGELDVAEVILQEMDEQQITAW 283
Query: 297 NSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFES--- 353
N +I+GY +G ++L+ + + + D VT + VL+AC+ + + EG+ I +
Sbjct: 284 NVLINGYTLHGRSREALETYQRLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVE 343
Query: 354 --MKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTH 409
+ S +V+ + ++ + G +E+A ++ ++MP A+ W +L A H
Sbjct: 344 CGLDSDVIVKN------ALTNMYSKCGSMENARRIFDSMPIRS-AVSWNGMLQAYAQH 394
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 138/285 (48%), Gaps = 20/285 (7%)
Query: 161 VVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVY---ERKGYELEVIDLFTL 217
V + +++ + G + AR VFD M + TW+ MI Y ER G E +F
Sbjct: 45 VFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISAYSISERSG---EAFFIFQR 101
Query: 218 MQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGE 277
MQ EG R + + +S+L C + +L HG+ V + F++D++V + LITMY +C
Sbjct: 102 MQHEGERCDRVTFLSILDACVNPENLQHGKHVRESISETSFELDLFVGTALITMYARCRS 161
Query: 278 LVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSA 337
+F K+++ W++II+ +A +G ++L+ F M G++P+ VT + +L+
Sbjct: 162 PENAAQVFGRMKQKNLITWSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNG 221
Query: 338 CSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGR--AGQVEDAMKLIEAMPFEPD 395
+ ++E I + +++ ++ T +V++ GR G+++ A +++ M E
Sbjct: 222 FTTPSGLEELSRI-HLLITEHGLDDTTTMSNALVNVYGRCETGELDVAEVILQEMD-EQQ 279
Query: 396 AIIWGSLLG----------ACRTHMKLDLAEVAAKKLLQLEPKNA 430
W L+ A T+ +L L + K+ + NA
Sbjct: 280 ITAWNVLINGYTLHGRSREALETYQRLQLEAIPVDKVTFISVLNA 324
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 92/192 (47%), Gaps = 2/192 (1%)
Query: 218 MQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGE 277
M EGV+ N + ++VL+ +L G+ +H+ + + +DV+V + L+ Y KCG
Sbjct: 1 MLLEGVKANVITFLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGS 60
Query: 278 LVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSA 337
L + +FD + + WNS+IS Y+ ++ +F M G D VT + +L A
Sbjct: 61 LTDARKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQHEGERCDRVTFLSILDA 120
Query: 338 CSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAI 397
C ++ G+ + ES+ S+ E ++ + R E+A ++ M + + I
Sbjct: 121 CVNPENLQHGKHVRESI-SETSFELDLFVGTALITMYARCRSPENAAQVFGRMK-QKNLI 178
Query: 398 IWGSLLGACRTH 409
W +++ A H
Sbjct: 179 TWSAIITAFADH 190
>gi|449445033|ref|XP_004140278.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Cucumis sativus]
Length = 679
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 213/471 (45%), Positives = 306/471 (64%), Gaps = 5/471 (1%)
Query: 134 TAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDA 193
T++++ Y +CG I DA ++F M ++ V + N+++ G ++G + A +F++M ++
Sbjct: 210 TSLIILYGKCGEINDAGKVFDNMTIRDVSSWNALLAGYTKSGCIDAALAIFERMPWRNIV 269
Query: 194 TWSGMIKVYERKGYELEVIDLFTLMQKE--GVRVNFPSLISVLSVCASLASLDHGRQVHA 251
+W+ MI Y + G + + LF M KE GVR N+ +++SVL CA L++L+ GRQ+H
Sbjct: 270 SWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVTIMSVLPACAQLSTLERGRQIHE 329
Query: 252 QLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFD--NFASKDIVMWNSIISGYAQYGLG 309
R + + V L MY KCG LV + FD N K+++ WN++I+ YA YG G
Sbjct: 330 LACRMGLNSNASVLIALTAMYAKCGSLVDARNCFDKLNRNEKNLIAWNTMITAYASYGHG 389
Query: 310 EKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYAC 369
+++ F EM +G+ PDD+T G+LS CS++G V G + F M + Y + P+ EHYAC
Sbjct: 390 LQAVSTFREMIQAGIQPDDITFTGLLSGCSHSGLVDVGLKYFNHMSTTYSINPRVEHYAC 449
Query: 370 MVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKN 429
+ DLLGRAG++ +A KL+ MP IWGSLL ACR H L++AE AA+KL LEP+N
Sbjct: 450 VADLLGRAGRLAEASKLVGEMPMPAGPSIWGSLLAACRKHRNLEMAETAARKLFVLEPEN 509
Query: 430 AGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPE 489
G Y+LLSN+YA GR+ +V +LR ++ + K PGCSWIE+ K HMF G D SHP+
Sbjct: 510 TGNYVLLSNMYAEAGRWQEVDKLRAIVKSQGTKKSPGCSWIEINGKAHMFLGGD-TSHPQ 568
Query: 490 HPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGV 549
I LE + ++ AGY PD+S+VLHD+ EEEK +L HSEKLAVA+G++ P
Sbjct: 569 GKEIYMFLEALPEKMKAAGYFPDTSYVLHDISEEEKEFNLIAHSEKLAVAFGILNTPAET 628
Query: 550 PIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
+RV KNLR+CGDCH+A+ IS++ GRE+I+RD NRFHHFK G CSC DYW
Sbjct: 629 VLRVTKNLRICGDCHTAMVFISEIYGREVIVRDINRFHHFKGGCCSCGDYW 679
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 130/288 (45%), Gaps = 36/288 (12%)
Query: 152 LFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEV 211
L + + ++V S M+ +G++ + VF+ + E ++ MI+ Y R G+
Sbjct: 97 LLRGLQPTALVGSK-MVAFYASSGDIDSSVSVFNGIGEPSSLLFNSMIRAYARYGFAERT 155
Query: 212 IDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITM 271
+ + M G ++ + VL L S+ G+ VH ++R D+YVA+ LI +
Sbjct: 156 VATYFSMHSWGFTGDYFTFPFVLKSSVELLSVWMGKCVHGLILRIGLQFDLYVATSLIIL 215
Query: 272 YIKCGELVKGKLIFDNFASKD-------------------------------IVMWNSII 300
Y KCGE+ +FDN +D IV W ++I
Sbjct: 216 YGKCGEINDAGKVFDNMTIRDVSSWNALLAGYTKSGCIDAALAIFERMPWRNIVSWTTMI 275
Query: 301 SGYAQYGLGEKSLKVFHEMFS--SGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKY 358
SGY+Q GL +++L +F EM SGV P+ VT++ VL AC+ ++ GR+I E + +
Sbjct: 276 SGYSQSGLAQQALSLFDEMVKEDSGVRPNWVTIMSVLPACAQLSTLERGRQIHE-LACRM 334
Query: 359 LVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMP-FEPDAIIWGSLLGA 405
+ + + + G + DA + + E + I W +++ A
Sbjct: 335 GLNSNASVLIALTAMYAKCGSLVDARNCFDKLNRNEKNLIAWNTMITA 382
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 103/223 (46%), Gaps = 43/223 (19%)
Query: 67 DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMP 126
D+ T++++ Y + G +++ ++FD M ++V SW +++GY + ID A +FE MP
Sbjct: 205 DLYVATSLIILYGKCGEINDAGKVFDNMTIRDVSSWNALLAGYTKSGCIDAALAIFERMP 264
Query: 127 EKNEVSWTAMLMGYTQCGRIQDAWELFKAM------------PMKSVVASNSMI------ 168
+N VSWT M+ GY+Q G Q A LF M + SV+ + + +
Sbjct: 265 WRNIVSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVTIMSVLPACAQLSTLERG 324
Query: 169 ---------LGLGQN--------------GEVQKARVVFDQM--REKDDATWSGMIKVYE 203
+GL N G + AR FD++ EK+ W+ MI Y
Sbjct: 325 RQIHELACRMGLNSNASVLIALTAMYAKCGSLVDARNCFDKLNRNEKNLIAWNTMITAYA 384
Query: 204 RKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHG 246
G+ L+ + F M + G++ + + +LS C+ +D G
Sbjct: 385 SYGHGLQAVSTFREMIQAGIQPDDITFTGLLSGCSHSGLVDVG 427
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 104/213 (48%), Gaps = 16/213 (7%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVV 69
T+++ Y + G I +AG +F M ++V SW +L G+ + ID A +F+ MP +++V
Sbjct: 210 TSLIILYGKCGEINDAGKVFDNMTIRDVSSWNALLAGYTKSGCIDAALAIFERMPWRNIV 269
Query: 70 AQTNMVLGYCQDGRVDEGREIFDEMPKKNV---ISWTTMIS---GYVNNNRIDVARKLFE 123
+ T M+ GY Q G + +FDEM K++ +W T++S + ++ R++ E
Sbjct: 270 SWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVTIMSVLPACAQLSTLERGRQIHE 329
Query: 124 VMP----EKNEVSWTAMLMGYTQCGRIQDAWELFKAMPM--KSVVASNSMILGLGQNGEV 177
+ N A+ Y +CG + DA F + K+++A N+MI G
Sbjct: 330 LACRMGLNSNASVLIALTAMYAKCGSLVDARNCFDKLNRNEKNLIAWNTMITAYASYGHG 389
Query: 178 QKARVVFDQMREK----DDATWSGMIKVYERKG 206
+A F +M + DD T++G++ G
Sbjct: 390 LQAVSTFREMIQAGIQPDDITFTGLLSGCSHSG 422
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 89/203 (43%), Gaps = 16/203 (7%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
M R+V SW A++ GY + G I A +F +MP +N+VSWT M+ G+ + A LF
Sbjct: 232 MTIRDVSSWNALLAGYTKSGCIDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLF 291
Query: 61 DMMPEKDVVAQTN-----MVLGYC-QDGRVDEGREIFDEMPK----KNVISWTTMISGYV 110
D M ++D + N VL C Q ++ GR+I + + N + + Y
Sbjct: 292 DEMVKEDSGVRPNWVTIMSVLPACAQLSTLERGRQIHELACRMGLNSNASVLIALTAMYA 351
Query: 111 NNNRIDVARKLFEVM--PEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSV----VAS 164
+ AR F+ + EKN ++W M+ Y G A F+ M + +
Sbjct: 352 KCGSLVDARNCFDKLNRNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQPDDITF 411
Query: 165 NSMILGLGQNGEVQKARVVFDQM 187
++ G +G V F+ M
Sbjct: 412 TGLLSGCSHSGLVDVGLKYFNHM 434
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 106/273 (38%), Gaps = 30/273 (10%)
Query: 229 SLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNF 288
S V L L G QVHA ++ V S ++ Y G++ +F+
Sbjct: 72 SYAPVFQFLTGLNMLKLGHQVHAHMLLRGLQPTALVGSKMVAFYASSGDIDSSVSVFNGI 131
Query: 289 ASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSA-----CSYTGK 343
+++NS+I YA+YG E+++ + M S G D T VL + + GK
Sbjct: 132 GEPSSLLFNSMIRAYARYGFAERTVATYFSMHSWGFTGDYFTFPFVLKSSVELLSVWMGK 191
Query: 344 VKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
G + ++ V ++ L G+ G++ DA K+ + M D W +LL
Sbjct: 192 CVHGLILRIGLQFDLYVA------TSLIILYGKCGEINDAGKVFDNMTIR-DVSSWNALL 244
Query: 404 GACRTHMKLDLAEVAAKKLLQLEP-KNAGPYILLSNIYASQGRFHDVAELRKNMRKRNV- 461
+D AA + + P +N + + + Y+ G L M K +
Sbjct: 245 AGYTKSGCID----AALAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMVKEDSG 300
Query: 462 IKP---------PGC---SWIEVEKKVHMFTGR 482
++P P C S +E +++H R
Sbjct: 301 VRPNWVTIMSVLPACAQLSTLERGRQIHELACR 333
>gi|147826737|emb|CAN70653.1| hypothetical protein VITISV_010023 [Vitis vinifera]
Length = 1301
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 213/489 (43%), Positives = 317/489 (64%), Gaps = 1/489 (0%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MP R+ VSW +++ GY + G E+ LF MP KNVVSW M+ G I D RID+A + F
Sbjct: 73 MPHRDTVSWNSIITGYWKNGCFDESKRLFGLMPTKNVVSWNSMIAGCIEDERIDEAWQYF 132
Query: 61 DMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARK 120
MP+++ + M+ G + RV+E +F+EMP++NVIS+T M+ GY I+ AR
Sbjct: 133 QAMPQRNTASWNAMISGLVRYDRVEEASRLFEEMPRRNVISYTAMVDGYAKIGEIEQARA 192
Query: 121 LFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKA 180
LF MP+KN VSWT M+ GY + G+ +A LF+ MP K++VA +MI G + G+ KA
Sbjct: 193 LFNCMPQKNVVSWTVMISGYVENGKFDEAENLFEQMPDKNIVAMTAMITGYCKEGKTDKA 252
Query: 181 RVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASL 240
+++FDQ+ +D A+W+ MI Y + G E + L + M K G++ + +LISVL+ C+SL
Sbjct: 253 KILFDQIPCRDLASWNAMITGYAQNGSGEEALKLHSQMLKMGMQPDHSTLISVLTACSSL 312
Query: 241 ASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSII 300
ASL GR+ H +++ ++ + + + LITMY KCG ++ +L F D+V WN++I
Sbjct: 313 ASLQEGRKTHVLVLKSGYESRISICNALITMYCKCGSILDSELAFRQIDHPDVVSWNAMI 372
Query: 301 SGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLV 360
+ +A++G +++L F EM S+ V PD +T + +LSAC + GKV E F SM Y +
Sbjct: 373 AAFARHGFYDRALASFGEMRSNRVEPDGITFLSLLSACGHAGKVHESLNWFNSMIXSYKI 432
Query: 361 EPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAK 420
+ EH+AC+VD+L R GQVE A K+I+ MPFE D IWG+LL AC H+ + L E+AAK
Sbjct: 433 VXRPEHFACLVDILSRGGQVEKAYKIIQEMPFEADCGIWGALLAACHVHLNVKLGELAAK 492
Query: 421 KLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFT 480
K+++LEP+N+G Y++LSNIYA+ G + +V +R MR++ V K P SW+E++ KVH F
Sbjct: 493 KIVELEPQNSGAYVVLSNIYAAAGMWGEVTRVRGLMREQGVKKQPAYSWMEIDNKVHFFL 552
Query: 481 GRDCVSHPE 489
G D SHPE
Sbjct: 553 GDD-ASHPE 560
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 102/219 (46%), Gaps = 17/219 (7%)
Query: 246 GRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQ 305
RQ H ++ DVY +V I + G + + +FD +D V WNSII+GY +
Sbjct: 31 NRQFHPLSIKLFSTQDVYAFNVQIGNLARAGNIGAARQVFDEMPHRDTVSWNSIITGYWK 90
Query: 306 YGLGEKSLKVFHEMFSSGVMPDD--VTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPK 363
G ++S ++F G+MP V+ +++ C ++ E + F++M +
Sbjct: 91 NGCFDESKRLF------GLMPTKNVVSWNSMIAGCIEDERIDEAWQYFQAMPQR-----N 139
Query: 364 TEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLL 423
T + M+ L R +VE+A +L E MP + I + +++ + K+ E A
Sbjct: 140 TASWNAMISGLVRYDRVEEASRLFEEMP-RRNVISYTAMVDG---YAKIGEIEQARALFN 195
Query: 424 QLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVI 462
+ KN + ++ + Y G+F + L + M +N++
Sbjct: 196 CMPQKNVVSWTVMISGYVENGKFDEAENLFEQMPDKNIV 234
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/286 (21%), Positives = 120/286 (41%), Gaps = 43/286 (15%)
Query: 153 FKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVI 212
K + V A N I L + G + AR VFD+M +D +W+ +I Y + G E
Sbjct: 39 IKLFSTQDVYAFNVQIGNLARAGNIGAARQVFDEMPHRDTVSWNSIITGYWKNGCFDESK 98
Query: 213 DLFTLMQKEGV---------------------------RVNFPSLISVLSVCASLASLDH 245
LF LM + V + N S +++S ++
Sbjct: 99 RLFGLMPTKNVVSWNSMIAGCIEDERIDEAWQYFQAMPQRNTASWNAMISGLVRYDRVEE 158
Query: 246 GRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQ 305
++ ++ R +V + ++ Y K GE+ + + +F+ K++V W +ISGY +
Sbjct: 159 ASRLFEEMPR----RNVISYTAMVDGYAKIGEIEQARALFNCMPQKNVVSWTVMISGYVE 214
Query: 306 YGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTE 365
G +++ +F +M + V + +++ GK + + +F+ + + L
Sbjct: 215 NGKFDEAENLFEQMPDKNI----VAMTAMITGYCKEGKTDKAKILFDQIPCRDLAS---- 266
Query: 366 HYACMVDLLGRAGQVEDAMKL---IEAMPFEPDAIIWGSLLGACRT 408
+ M+ + G E+A+KL + M +PD S+L AC +
Sbjct: 267 -WNAMITGYAQNGSGEEALKLHSQMLKMGMQPDHSTLISVLTACSS 311
>gi|449481169|ref|XP_004156102.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Cucumis sativus]
Length = 642
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 213/471 (45%), Positives = 306/471 (64%), Gaps = 5/471 (1%)
Query: 134 TAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDA 193
T++++ Y +CG I DA ++F M ++ V + N+++ G ++G + A +F++M ++
Sbjct: 173 TSLIILYGKCGEINDAGKVFDNMTIRDVSSWNALLAGYTKSGCIDAALAIFERMPWRNIV 232
Query: 194 TWSGMIKVYERKGYELEVIDLFTLMQKE--GVRVNFPSLISVLSVCASLASLDHGRQVHA 251
+W+ MI Y + G + + LF M KE GVR N+ +++SVL CA L++L+ GRQ+H
Sbjct: 233 SWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVTIMSVLPACAQLSTLERGRQIHE 292
Query: 252 QLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFD--NFASKDIVMWNSIISGYAQYGLG 309
R + + V L MY KCG LV + FD N K+++ WN++I+ YA YG G
Sbjct: 293 LACRMGLNSNASVLIALTAMYAKCGSLVDARNCFDKLNRNEKNLIAWNTMITAYASYGHG 352
Query: 310 EKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYAC 369
+++ F EM +G+ PDD+T G+LS CS++G V G + F M + Y + P+ EHYAC
Sbjct: 353 LQAVSTFREMIQAGIQPDDITFTGLLSGCSHSGLVDVGLKYFNHMSTTYSINPRVEHYAC 412
Query: 370 MVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKN 429
+ DLLGRAG++ +A KL+ MP IWGSLL ACR H L++AE AA+KL LEP+N
Sbjct: 413 VADLLGRAGRLAEASKLVGEMPMPAGPSIWGSLLAACRKHRNLEMAETAARKLFVLEPEN 472
Query: 430 AGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPE 489
G Y+LLSN+YA GR+ +V +LR ++ + K PGCSWIE+ K HMF G D SHP+
Sbjct: 473 TGNYVLLSNMYAEAGRWQEVDKLRAIVKSQGTKKSPGCSWIEINGKAHMFLGGD-TSHPQ 531
Query: 490 HPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGV 549
I LE + ++ AGY PD+S+VLHD+ EEEK +L HSEKLAVA+G++ P
Sbjct: 532 GKEIYMFLEALPEKMKAAGYFPDTSYVLHDISEEEKEFNLIAHSEKLAVAFGILNTPAET 591
Query: 550 PIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
+RV KNLR+CGDCH+A+ IS++ GRE+I+RD NRFHHFK G CSC DYW
Sbjct: 592 VLRVTKNLRICGDCHTAMVFISEIYGREVIVRDINRFHHFKGGCCSCGDYW 642
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 103/223 (46%), Gaps = 43/223 (19%)
Query: 67 DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMP 126
D+ T++++ Y + G +++ ++FD M ++V SW +++GY + ID A +FE MP
Sbjct: 168 DLYVATSLIILYGKCGEINDAGKVFDNMTIRDVSSWNALLAGYTKSGCIDAALAIFERMP 227
Query: 127 EKNEVSWTAMLMGYTQCGRIQDAWELFKAM------------PMKSVVASNSMI------ 168
+N VSWT M+ GY+Q G Q A LF M + SV+ + + +
Sbjct: 228 WRNIVSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVTIMSVLPACAQLSTLERG 287
Query: 169 ---------LGLGQN--------------GEVQKARVVFDQM--REKDDATWSGMIKVYE 203
+GL N G + AR FD++ EK+ W+ MI Y
Sbjct: 288 RQIHELACRMGLNSNASVLIALTAMYAKCGSLVDARNCFDKLNRNEKNLIAWNTMITAYA 347
Query: 204 RKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHG 246
G+ L+ + F M + G++ + + +LS C+ +D G
Sbjct: 348 SYGHGLQAVSTFREMIQAGIQPDDITFTGLLSGCSHSGLVDVG 390
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 104/213 (48%), Gaps = 16/213 (7%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVV 69
T+++ Y + G I +AG +F M ++V SW +L G+ + ID A +F+ MP +++V
Sbjct: 173 TSLIILYGKCGEINDAGKVFDNMTIRDVSSWNALLAGYTKSGCIDAALAIFERMPWRNIV 232
Query: 70 AQTNMVLGYCQDGRVDEGREIFDEMPKKNV---ISWTTMIS---GYVNNNRIDVARKLFE 123
+ T M+ GY Q G + +FDEM K++ +W T++S + ++ R++ E
Sbjct: 233 SWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVTIMSVLPACAQLSTLERGRQIHE 292
Query: 124 VMP----EKNEVSWTAMLMGYTQCGRIQDAWELFKAMPM--KSVVASNSMILGLGQNGEV 177
+ N A+ Y +CG + DA F + K+++A N+MI G
Sbjct: 293 LACRMGLNSNASVLIALTAMYAKCGSLVDARNCFDKLNRNEKNLIAWNTMITAYASYGHG 352
Query: 178 QKARVVFDQMREK----DDATWSGMIKVYERKG 206
+A F +M + DD T++G++ G
Sbjct: 353 LQAVSTFREMIQAGIQPDDITFTGLLSGCSHSG 385
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 107/244 (43%), Gaps = 41/244 (16%)
Query: 196 SGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVR 255
S M+ Y G ++ ++ G FP VL L S+ G+ VH ++R
Sbjct: 109 SKMVAFYASSG---DIDSSVSVFNGIGDYFTFPF---VLKSSVELLSVWMGKCVHGLILR 162
Query: 256 CQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKD----------------------- 292
D+YVA+ LI +Y KCGE+ +FDN +D
Sbjct: 163 IGLQFDLYVATSLIILYGKCGEINDAGKVFDNMTIRDVSSWNALLAGYTKSGCIDAALAI 222
Query: 293 --------IVMWNSIISGYAQYGLGEKSLKVFHEMF--SSGVMPDDVTLVGVLSACSYTG 342
IV W ++ISGY+Q GL +++L +F EM SGV P+ VT++ VL AC+
Sbjct: 223 FERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVTIMSVLPACAQLS 282
Query: 343 KVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMP-FEPDAIIWGS 401
++ GR+I E + + + + + + G + DA + + E + I W +
Sbjct: 283 TLERGRQIHE-LACRMGLNSNASVLIALTAMYAKCGSLVDARNCFDKLNRNEKNLIAWNT 341
Query: 402 LLGA 405
++ A
Sbjct: 342 MITA 345
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 89/203 (43%), Gaps = 16/203 (7%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
M R+V SW A++ GY + G I A +F +MP +N+VSWT M+ G+ + A LF
Sbjct: 195 MTIRDVSSWNALLAGYTKSGCIDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLF 254
Query: 61 DMMPEKDVVAQTN-----MVLGYC-QDGRVDEGREIFDEMPK----KNVISWTTMISGYV 110
D M ++D + N VL C Q ++ GR+I + + N + + Y
Sbjct: 255 DEMVKEDSGVRPNWVTIMSVLPACAQLSTLERGRQIHELACRMGLNSNASVLIALTAMYA 314
Query: 111 NNNRIDVARKLFEVM--PEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSV----VAS 164
+ AR F+ + EKN ++W M+ Y G A F+ M + +
Sbjct: 315 KCGSLVDARNCFDKLNRNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQPDDITF 374
Query: 165 NSMILGLGQNGEVQKARVVFDQM 187
++ G +G V F+ M
Sbjct: 375 TGLLSGCSHSGLVDVGLKYFNHM 397
>gi|449514605|ref|XP_004164425.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g49170, chloroplastic-like [Cucumis sativus]
Length = 849
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 235/624 (37%), Positives = 371/624 (59%), Gaps = 29/624 (4%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM------PEKNVVSWTV---------MLG 45
MPERN V+WT M+ ++ G EA LF M P++ +S + +LG
Sbjct: 231 MPERNAVTWTLMITRLMQFGYAGEAIDLFLDMIFSGYEPDRFTLSGVISACANMELLLLG 290
Query: 46 GFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTM 105
+ I L + NM DG + R+IFD++ NV SWT M
Sbjct: 291 QQLHSQAIRHGLTLDRCVG----CCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAM 346
Query: 106 ISGYV-----NNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFK---AMP 157
I+GYV + +D+ R + N ++++ L ++ ++F +
Sbjct: 347 ITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLG 406
Query: 158 MKSV-VASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFT 216
SV +NS+I ++G + AR FD + EK+ +++ +I Y + E ++LF
Sbjct: 407 FSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELFN 466
Query: 217 LMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCG 276
++ +G+ + + S+LS AS+ ++ G Q+HA++++ ++ V + LI+MY +CG
Sbjct: 467 EIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCNALISMYSRCG 526
Query: 277 ELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLS 336
+ +F++ ++++ W SII+G+A++G ++L++FH+M GV P++VT + VLS
Sbjct: 527 NIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHKMLEEGVRPNEVTYIAVLS 586
Query: 337 ACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDA 396
ACS+ G V EG + F+SM +++ V P+ EHYAC+VD+LGR+G + +A++ I +MP++ DA
Sbjct: 587 ACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACIVDILGRSGSLSEAIQFINSMPYKADA 646
Query: 397 IIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNM 456
++W + LGACR H L+L + AAK +++ EP + YILLSN+YAS ++ +V+ +RK M
Sbjct: 647 LVWRTFLGACRVHGNLELGKHAAKMIIEQEPHDPAAYILLSNLYASISKWDEVSNIRKAM 706
Query: 457 RKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFV 516
+++ +IK GCSW+EVE KVH F D SHP+ I L+ + +++ GY P+ FV
Sbjct: 707 KEKXLIKEAGCSWVEVENKVHKFYVGD-TSHPKAAEIYDELQNLSVKIKKLGYVPNLDFV 765
Query: 517 LHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGR 576
LHDV+EE+K L HSEK+AVA+GL+ + PIRV KNLR+CGDCHSAIK IS GR
Sbjct: 766 LHDVEEEQKEKLLFQHSEKIAVAFGLISTSKMKPIRVFKNLRICGDCHSAIKYISMATGR 825
Query: 577 EIILRDANRFHHFKDGLCSCRDYW 600
EII+RDANRFHH KDG CSC +YW
Sbjct: 826 EIIVRDANRFHHIKDGRCSCNEYW 849
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 102/399 (25%), Positives = 187/399 (46%), Gaps = 31/399 (7%)
Query: 31 QMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDV----VAQTNMVLGYCQDGRVDE 86
Q ++ ++++ L IR D + + + + D+ V +++ Y + G+ ++
Sbjct: 60 QGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTLNSLISLYSKCGQWEK 119
Query: 87 GREIFDEM-PKKNVISWTTMISGYVNNNRIDVARKLFEVMPEK----NEVSWTAMLMGYT 141
IF M +++ISW+ M+S + NNN A F M E NE + A +
Sbjct: 120 ATSIFRLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENGYYPNEYCFAAATRACS 179
Query: 142 QCGRIQDAWELFKAMPMKSVVASNSMILGLG-------QNGEVQKARVVFDQMREKDDAT 194
+ +F +K+ + + +G G G++ A VF++M E++ T
Sbjct: 180 TAEFVSVGDSIF-GFVIKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVT 238
Query: 195 WSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLV 254
W+ MI + GY E IDLF M G + +L V+S CA++ L G+Q+H+Q +
Sbjct: 239 WTLMITRLMQFGYAGEAIDLFLDMIFSGYEPDRFTLSGVISACANMELLLLGQQLHSQAI 298
Query: 255 RCQFDVDVYVASVLITMYIKC---GELVKGKLIFDNFASKDIVMWNSIISGYAQY-GLGE 310
R +D V LI MY KC G + + IFD ++ W ++I+GY Q G E
Sbjct: 299 RHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDE 358
Query: 311 KSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYAC- 369
++L +F M + V+P+ T L AC+ ++ G ++F + V+ C
Sbjct: 359 EALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVF-----THAVKLGFSSVNCV 413
Query: 370 ---MVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
++ + R+G+++DA K + + FE + I + +++ A
Sbjct: 414 ANSLISMYARSGRIDDARKAFDIL-FEKNLISYNTVIDA 451
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 90/194 (46%), Gaps = 7/194 (3%)
Query: 210 EVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLI 269
+ I M +G + + L C S D G VH +L + +D + LI
Sbjct: 49 KAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTLNSLI 108
Query: 270 TMYIKCGELVKGKLIFDNF-ASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDD 328
++Y KCG+ K IF +S+D++ W++++S +A +G ++L F +M +G P++
Sbjct: 109 SLYSKCGQWEKATSIFRLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENGYYPNE 168
Query: 329 VTLVGVLSACSYTGKVKEGREIFE-SMKSKYLVEPKTEHYAC-MVDLLGRA-GQVEDAMK 385
ACS V G IF +K+ YL C ++D+ + G + A K
Sbjct: 169 YCFAAATRACSTAEFVSVGDSIFGFVIKTGYLQSDVC--VGCGLIDMFVKGRGDLVSAFK 226
Query: 386 LIEAMPFEPDAIIW 399
+ E MP E +A+ W
Sbjct: 227 VFEKMP-ERNAVTW 239
>gi|15234831|ref|NP_194799.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75208664|sp|Q9SUH6.1|PP341_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g30700; AltName: Full=Protein DYW9
gi|5725434|emb|CAB52443.1| putative protein [Arabidopsis thaliana]
gi|7269971|emb|CAB79788.1| putative protein [Arabidopsis thaliana]
gi|332660398|gb|AEE85798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 792
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 228/614 (37%), Positives = 360/614 (58%), Gaps = 15/614 (2%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV--VSWTVMLGGFIRDSRIDDAR- 57
MPE++ + W M+ GY + M E+ +F + ++ + T +L + + + R
Sbjct: 180 MPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRL 239
Query: 58 --RLFDMMPEKDVVAQTNMVLG----YCQDGRVDEGREIFDEMPKKNVISWTTMISGYVN 111
++ + + + ++ G Y + G++ G +F E K +++++ MI GY +
Sbjct: 240 GMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTS 299
Query: 112 NNRIDVARKLF-EVMPEKNEVSWTAMLMGYTQCGRIQDAWEL----FKAMPMKSVVASNS 166
N +++ LF E+M + + ++ G + + + K+ + S +
Sbjct: 300 NGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIYAIHGYCLKSNFLSHASVSTA 359
Query: 167 MILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVN 226
+ + E++ AR +FD+ EK +W+ MI Y + G + I LF MQK N
Sbjct: 360 LTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPN 419
Query: 227 FPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFD 286
++ +LS CA L +L G+ VH + F+ +YV++ LI MY KCG + + + +FD
Sbjct: 420 PVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFD 479
Query: 287 NFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKE 346
K+ V WN++ISGY +G G+++L +F+EM +SG+ P VT + VL ACS+ G VKE
Sbjct: 480 LMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKE 539
Query: 347 GREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGAC 406
G EIF SM +Y EP +HYACMVD+LGRAG ++ A++ IEAM EP + +W +LLGAC
Sbjct: 540 GDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGAC 599
Query: 407 RTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPG 466
R H +LA ++KL +L+P N G ++LLSNI+++ + A +R+ +KR + K PG
Sbjct: 600 RIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPG 659
Query: 467 CSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKV 526
+ IE+ + H+FT D SHP+ I LEK+ G +REAGY P++ LHDV+EEE+
Sbjct: 660 YTLIEIGETPHVFTSGD-QSHPQVKEIYEKLEKLEGKMREAGYQPETELALHDVEEEERE 718
Query: 527 HSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRF 586
++ HSE+LA+A+GL+ G IR++KNLRVC DCH+ KLISK+ R I++RDANRF
Sbjct: 719 LMVKVHSERLAIAFGLIATEPGTEIRIIKNLRVCLDCHTVTKLISKITERVIVVRDANRF 778
Query: 587 HHFKDGLCSCRDYW 600
HHFKDG+CSC DYW
Sbjct: 779 HHFKDGVCSCGDYW 792
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 91/386 (23%), Positives = 166/386 (43%), Gaps = 78/386 (20%)
Query: 65 EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN------------ 112
+ +++ +N+V Y + RV++ R++FD MP+K+ I W TMISGY N
Sbjct: 151 DSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRD 210
Query: 113 ------NRIDVARKLFEVMPEKNEVS-----------------------WTAMLMGYTQC 143
R+D L +++P E+ T + Y++C
Sbjct: 211 LINESCTRLDTT-TLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKC 269
Query: 144 GRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYE 203
G+I+ LF+ +VA N+MI G NGE + +
Sbjct: 270 GKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELS----------------------- 306
Query: 204 RKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVY 263
+ LF + G R+ +L+S++ V L + +H ++ F
Sbjct: 307 --------LSLFKELMLSGARLRSSTLVSLVPVSGHLMLI---YAIHGYCLKSNFLSHAS 355
Query: 264 VASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSG 323
V++ L T+Y K E+ + +FD K + WN++ISGY Q GL E ++ +F EM S
Sbjct: 356 VSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSE 415
Query: 324 VMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDA 383
P+ VT+ +LSAC+ G + G+ + + ++S E ++ + + G + +A
Sbjct: 416 FSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDF-ESSIYVSTALIGMYAKCGSIAEA 474
Query: 384 MKLIEAMPFEPDAIIWGSLLGACRTH 409
+L + M + + + W +++ H
Sbjct: 475 RRLFDLMT-KKNEVTWNTMISGYGLH 499
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/255 (20%), Positives = 118/255 (46%), Gaps = 4/255 (1%)
Query: 171 LGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEG-VRVNFPS 229
L G + AR +F ++ D ++ +++ + + +F ++K ++ N +
Sbjct: 62 LSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSST 121
Query: 230 LISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFA 289
+S + GR +H Q V D ++ + S ++ MY K + + +FD
Sbjct: 122 YAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMP 181
Query: 290 SKDIVMWNSIISGYAQYGLGEKSLKVFHEMFS-SGVMPDDVTLVGVLSACSYTGKVKEGR 348
KD ++WN++ISGY + + +S++VF ++ + S D TL+ +L A + +++ G
Sbjct: 182 EKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGM 241
Query: 349 EIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRT 408
+I S+ +K + L + G+++ L +PD + + +++ +
Sbjct: 242 QI-HSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFR-KPDIVAYNAMIHGYTS 299
Query: 409 HMKLDLAEVAAKKLL 423
+ + +L+ K+L+
Sbjct: 300 NGETELSLSLFKELM 314
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 80/173 (46%), Gaps = 13/173 (7%)
Query: 241 ASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSII 300
S+ H Q HAQ++ F D+ + + L G + + IF + D+ ++N ++
Sbjct: 31 TSISHLAQTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLM 90
Query: 301 SGYAQYGLGEKSLKVF-HEMFSSGVMPDDVTLVGVLSACS-----YTGKVKEGREIFESM 354
G++ SL VF H S+ + P+ T +SA S G+V G+ + +
Sbjct: 91 RGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGC 150
Query: 355 KSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACR 407
S+ L+ +V + + +VEDA K+ + MP E D I+W +++ R
Sbjct: 151 DSELLLGSN------IVKMYFKFWRVEDARKVFDRMP-EKDTILWNTMISGYR 196
>gi|359488555|ref|XP_003633777.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like, partial [Vitis vinifera]
Length = 825
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 251/719 (34%), Positives = 383/719 (53%), Gaps = 121/719 (16%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM----PEKNVVSWTVMLGG---------- 46
M ER V+WT ++ GY + EA LF QM E + V++ +L G
Sbjct: 109 MVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTFVTLLSGCNGHEMGNQI 168
Query: 47 -------------------------FIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQD 81
+ + +R+D A +LF MPE D V+ M+ GY +D
Sbjct: 169 TQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMPEIDSVSYNAMITGYSKD 228
Query: 82 GRVDEGREIFDEMPK----------------------------------KNVISWTTMIS 107
G ++ +F EM K W +S
Sbjct: 229 GLDEKAVNLFVEMQNSGLKPTEFTFAAVLCANIGLDDIVLGQQIHSFVIKTNFVWNVFVS 288
Query: 108 G-----YVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELF--------- 153
Y ++ + ARKLF+ MPE++ VS+ ++ GY G+ + A++LF
Sbjct: 289 NALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFD 348
Query: 154 -KAMPMKSV--VASNSMILGLGQN---------------------------GEVQKARVV 183
K P ++ +ASN++ +G+ G+ ++A ++
Sbjct: 349 RKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMI 408
Query: 184 FDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASL 243
F + + W+ MI Y +KG+ E + LF M++ V + + S+L AS+ASL
Sbjct: 409 FTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASASIASL 468
Query: 244 DHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGY 303
G+Q+H+ +++ F +V+ S L+ +Y KCG + F ++IV WN++IS Y
Sbjct: 469 SLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAY 528
Query: 304 AQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPK 363
AQ G E +LK F EM SG+ PD V+ +GVLSACS++G V+EG F SM Y ++P+
Sbjct: 529 AQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSGLVEEGLWHFNSMTQIYKLDPR 588
Query: 364 TEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLL 423
EHYA +VD+L R+G+ +A KL+ MP +PD I+W S+L ACR H +LA AA +L
Sbjct: 589 REHYASVVDMLCRSGRFNEAEKLMAEMPIDPDEIMWSSVLNACRIHKNQELARRAADQLF 648
Query: 424 QLEP-KNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGR 482
+E ++A PY+ +SNIYA+ G++ +V+++ K MR R V K P SW+E++ + HMF+
Sbjct: 649 NMEELRDAAPYVNMSNIYAAAGQWENVSKVHKAMRDRGVKKLPAYSWVEIKHETHMFSAN 708
Query: 483 D-CVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYG 541
D C HP+ I + ++ + + E GY PD+S LH+ DE+ KV SL+YHSE+LA+A+
Sbjct: 709 DRC--HPQIEEIRKKIDMLTKTMEELGYKPDTSCALHNEDEKFKVESLKYHSERLAIAFA 766
Query: 542 LVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
L+ PEG PI VMKNLR C DCH+AIK+ISK++GREI +RD+ RFHHF+DG CSC D+W
Sbjct: 767 LISTPEGSPILVMKNLRACIDCHAAIKVISKIVGREITVRDSTRFHHFRDGFCSCGDFW 825
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 121/473 (25%), Positives = 227/473 (47%), Gaps = 84/473 (17%)
Query: 13 VRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQT 72
V +++ G +++A LF +MP KN VS +M+ G+++ + +AR+LFD M E+ V T
Sbjct: 59 VGNFLKNGELSQARQLFEKMPHKNTVSTNMMISGYVKSGNLGEARKLFDGMVERTAVTWT 118
Query: 73 NMVLGYCQDGRVDEGREIFDEMPK----KNVISWTTMISG-------------------- 108
++ GY Q + E E+F +M + + +++ T++SG
Sbjct: 119 ILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTFVTLLSGCNGHEMGNQITQVQTQIIKL 178
Query: 109 ---------------YVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELF 153
Y +NR+D+A +LF+ MPE + VS+ AM+ GY++ G + A LF
Sbjct: 179 GYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMPEIDSVSYNAMITGYSKDGLDEKAVNLF 238
Query: 154 KAM------PMK---------------------------------SVVASNSMILGLGQN 174
M P + +V SN+++ ++
Sbjct: 239 VEMQNSGLKPTEFTFAAVLCANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKH 298
Query: 175 GEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGV-RVNFPSLISV 233
V AR +FD+M E+D +++ +I Y G DLF +Q R FP ++
Sbjct: 299 DSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFP-FATM 357
Query: 234 LSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDI 293
LS+ ++ + GRQ+HAQ + D ++ V + L+ MY KCG+ + ++IF N +
Sbjct: 358 LSIASNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSA 417
Query: 294 VMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFES 353
V W ++IS Y Q G E+ L++F++M + V+ D T +L A + + G+++
Sbjct: 418 VPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQLHSF 477
Query: 354 -MKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
+KS ++ + + ++D+ + G ++DA++ + MP + + + W +++ A
Sbjct: 478 IIKSGFMSNVFSG--SALLDVYAKCGSIKDAVQTFQEMP-DRNIVSWNAMISA 527
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 92/382 (24%), Positives = 179/382 (46%), Gaps = 52/382 (13%)
Query: 69 VAQTNMVLG-YCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPE 127
+++N +G + ++G + + R++F++MP KN +S MISGYV + + ARKLF+ M E
Sbjct: 52 TSRSNFRVGNFLKNGELSQARQLFEKMPHKNTVSTNMMISGYVKSGNLGEARKLFDGMVE 111
Query: 128 KNEVSWTAMLMGYTQCGRIQDAWELFKAMPM----------------------------- 158
+ V+WT ++ GY+Q + ++A+ELF M
Sbjct: 112 RTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTFVTLLSGCNGHEMGNQITQV 171
Query: 159 ----------KSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYE 208
++ N+++ ++ + A +F +M E D +++ MI Y + G +
Sbjct: 172 QTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMPEIDSVSYNAMITGYSKDGLD 231
Query: 209 LEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVL 268
+ ++LF MQ G++ + +VL L + G+Q+H+ +++ F +V+V++ L
Sbjct: 232 EKAVNLFVEMQNSGLKPTEFTFAAVLCANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNAL 291
Query: 269 ITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDD 328
+ Y K ++ + +FD +D V +N IISGYA G + + +F E+ +
Sbjct: 292 LDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQ 351
Query: 329 VTLVGVLSACSYT-----GKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDA 383
+LS S T G+ + I + S+ LV +VD+ + G+ E+A
Sbjct: 352 FPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGNS------LVDMYAKCGKFEEA 405
Query: 384 MKLIEAMPFEPDAIIWGSLLGA 405
+ + A+ W +++ A
Sbjct: 406 EMIFTNLTHRS-AVPWTAMISA 426
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 88/200 (44%), Gaps = 16/200 (8%)
Query: 223 VRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGK 282
++ N + + S+ + L+ + A++V+ FD D ++ + ++K GEL + +
Sbjct: 13 MKKNVSTFLKSSSLQSPKLRLNVVNNIDARIVKTGFDPDTSRSNFRVGNFLKNGELSQAR 72
Query: 283 LIFDNFASKDIVMWNSIISGYAQYG-LGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYT 341
+F+ K+ V N +ISGY + G LGE ++F V VT ++ S
Sbjct: 73 QLFEKMPHKNTVSTNMMISGYVKSGNLGEA-----RKLFDGMVERTAVTWTILIGGYSQL 127
Query: 342 GKVKEGREIFESMKSKYLVEPKTEHYACMVDLLG------RAGQVEDAMKLIEAMPFEPD 395
+ KE E+F M+ + EP Y V LL Q+ I + ++
Sbjct: 128 NQFKEAFELFVQMQ-RCGTEPD---YVTFVTLLSGCNGHEMGNQITQVQTQIIKLGYDSR 183
Query: 396 AIIWGSLLGACRTHMKLDLA 415
I+ +L+ + +LDLA
Sbjct: 184 LIVGNTLVDSYCKSNRLDLA 203
>gi|357139833|ref|XP_003571481.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Brachypodium distachyon]
Length = 617
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 229/578 (39%), Positives = 344/578 (59%), Gaps = 13/578 (2%)
Query: 35 KNVVSWTVMLGGFIRDSR--------IDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDE 86
K + +L G+ R +R + DAR LFD +P D V+ ++ + G V
Sbjct: 41 KTTADYNRLLAGYARAARPGGRRDRLLADARHLFDRIPRPDAVSYNTLLSCHFAAGDVRG 100
Query: 87 GREIFDEMPK--KNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCG 144
R++F MP +NV SW TM+SG + + AR +F MP +N +SW AM+ + G
Sbjct: 101 ARDLFAAMPATARNVTSWNTMLSGLSRSGAVGEARAVFLAMPARNSISWNAMVSCFAHAG 160
Query: 145 RIQDAWELFKAMPMK-SVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYE 203
+ A E F+ P K + V +M+ G +G V+KA F+ M + +W+ ++ Y
Sbjct: 161 DMCAAEECFEDAPDKENAVLWTAMVSGYMDSGHVEKAMQFFEAMPVRSLVSWNAVVAGYV 220
Query: 204 RKGYELEVIDLF-TLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDV 262
+ + + +F T+++ VR N +L SVL C++L++L GRQVH + V
Sbjct: 221 KNSRAEDALWVFKTMVRDADVRPNESTLSSVLLGCSNLSALGFGRQVHQWCTKLPLSRRV 280
Query: 263 YVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSS 322
+ L++MY KCG+L +F +D++ WN++ISGYA +G G +++++F +M S
Sbjct: 281 TAGTSLVSMYCKCGDLDGACKLFSEMRIRDVIAWNAMISGYAHHGDGREAIELFEKMKSQ 340
Query: 323 GVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVED 382
GV P+ +T V VL+AC +TG G + FE M+ Y +E + +HY+CMVDLL RAG +E
Sbjct: 341 GVEPNWITFVAVLTACIHTGMCDFGMQCFERMQEVYGIEARVDHYSCMVDLLCRAGSLER 400
Query: 383 AMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYAS 442
A+ LI +MPF+P +G+LL A R + ++ AE AA KL++ P+NAG Y+ L+NIYA
Sbjct: 401 AVSLIRSMPFQPHPSAYGTLLNASRVYKNMEFAEFAAGKLIEQNPQNAGAYVQLANIYAV 460
Query: 443 QGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGG 502
++ DV+ +R+ M+ V+K PG SW+E+ +H+F D + HP+ +I L ++
Sbjct: 461 ANQWADVSRVRRWMKDNAVVKTPGYSWVEINGVIHVFRSNDRL-HPQLSLIHERLCQLEE 519
Query: 503 LLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGD 562
++ GY PD F LHDVDE KV L HSEKLA+A+GL+ G+ +R+ KNLRVCGD
Sbjct: 520 RMKAMGYVPDLDFALHDVDESLKVQMLMRHSEKLAIAFGLLSTAPGITLRIFKNLRVCGD 579
Query: 563 CHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
CH+A KLISK+ REIILRD RFHHF+ G CSC DYW
Sbjct: 580 CHTAAKLISKIEDREIILRDTTRFHHFRSGHCSCGDYW 617
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 144/293 (49%), Gaps = 19/293 (6%)
Query: 4 RNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMM 63
RNV SW M+ G G + EA +F MP +N +SW M+ F + A F+
Sbjct: 113 RNVTSWNTMLSGLSRSGAVGEARAVFLAMPARNSISWNAMVSCFAHAGDMCAAEECFEDA 172
Query: 64 PEK-DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLF 122
P+K + V T MV GY G V++ + F+ MP ++++SW +++GYV N+R + A +F
Sbjct: 173 PDKENAVLWTAMVSGYMDSGHVEKAMQFFEAMPVRSLVSWNAVVAGYVKNSRAEDALWVF 232
Query: 123 EVMPEK-----NEVSWTAMLMGYTQC-----GRIQDAWELFKAMPM-KSVVASNSMILGL 171
+ M NE + +++L+G + GR W +P+ + V A S++
Sbjct: 233 KTMVRDADVRPNESTLSSVLLGCSNLSALGFGRQVHQW--CTKLPLSRRVTAGTSLVSMY 290
Query: 172 GQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLI 231
+ G++ A +F +MR +D W+ MI Y G E I+LF M+ +GV N+ + +
Sbjct: 291 CKCGDLDGACKLFSEMRIRDVIAWNAMISGYAHHGDGREAIELFEKMKSQGVEPNWITFV 350
Query: 232 SVLSVCASLASLDHGRQVHAQLVRC---QFDVDVYVASVLITMYIKCGELVKG 281
+VL+ C D G Q ++ + VD Y S ++ + + G L +
Sbjct: 351 AVLTACIHTGMCDFGMQCFERMQEVYGIEARVDHY--SCMVDLLCRAGSLERA 401
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 95/170 (55%), Gaps = 13/170 (7%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF-- 60
+ N V WTAMV GY++ G + +A F MP +++VSW ++ G++++SR +DA +F
Sbjct: 175 KENAVLWTAMVSGYMDSGHVEKAMQFFEAMPVRSLVSWNAVVAGYVKNSRAEDALWVFKT 234
Query: 61 -----DMMPEKDVVAQTNMVLGYCQDGRVDEGREIFD---EMP-KKNVISWTTMISGYVN 111
D+ P + + ++++LG + GR++ ++P + V + T+++S Y
Sbjct: 235 MVRDADVRPNESTL--SSVLLGCSNLSALGFGRQVHQWCTKLPLSRRVTAGTSLVSMYCK 292
Query: 112 NNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSV 161
+D A KLF M ++ ++W AM+ GY G ++A ELF+ M + V
Sbjct: 293 CGDLDGACKLFSEMRIRDVIAWNAMISGYAHHGDGREAIELFEKMKSQGV 342
>gi|356533814|ref|XP_003535453.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Glycine max]
Length = 782
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 230/594 (38%), Positives = 362/594 (60%), Gaps = 15/594 (2%)
Query: 21 MITEAGTLFWQMP--EKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGY 78
++ A LF + P ++ +WT ++ G++R+ + AR L + M + VA M+ GY
Sbjct: 190 LMAAARKLFDEAPPGRRDEPAWTTIIAGYVRNDDLVAARELLEGMTDHIAVAWNAMISGY 249
Query: 79 CQDGRVDEGREIFDEMPKKNV----ISWTTMISGYVNNNRIDVARKLFE------VMPEK 128
G +E ++ M + ++T++IS N ++ R++ V P
Sbjct: 250 VHRGFYEEAFDLLRRMHSLGIQLDEYTYTSVISAASNAGLFNIGRQVHAYVLRTVVQPSG 309
Query: 129 NEVSW--TAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQ 186
+ V A++ YT+CG++ +A +F MP+K +V+ N+++ G +++A +F +
Sbjct: 310 HFVLSVNNALITLYTRCGKLVEARRVFDKMPVKDLVSWNAILSGCVNARRIEEANSIFRE 369
Query: 187 MREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHG 246
M + TW+ MI + G+ E + LF M+ EG+ + ++ C+ L SLD+G
Sbjct: 370 MPVRSLLTWTVMISGLAQNGFGEEGLKLFNQMKLEGLEPCDYAYAGAIASCSVLGSLDNG 429
Query: 247 RQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQY 306
+Q+H+Q+++ D + V + LITMY +CG + +F D V WN++I+ AQ+
Sbjct: 430 QQLHSQIIQLGHDSSLSVGNALITMYSRCGLVEAADTVFLTMPYVDSVSWNAMIAALAQH 489
Query: 307 GLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEH 366
G G ++++++ +M ++PD +T + +LSACS+ G VKEGR F++M+ Y + P+ +H
Sbjct: 490 GHGVQAIQLYEKMLKEDILPDRITFLTILSACSHAGLVKEGRHYFDTMRVCYGITPEEDH 549
Query: 367 YACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLE 426
Y+ ++DLL RAG +A + E+MPFEP A IW +LL C H ++L AA +LL+L
Sbjct: 550 YSRLIDLLCRAGMFSEAKNVTESMPFEPGAPIWEALLAGCWIHGNMELGIQAADRLLELM 609
Query: 427 PKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVS 486
P+ G YI LSN+YA+ G++ +VA +RK MR+R V K PGCSWIEVE VH+F D V
Sbjct: 610 PQQDGTYISLSNMYAALGQWDEVARVRKLMRERGVKKEPGCSWIEVENMVHVFLVDDAV- 668
Query: 487 HPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLP 546
HPE + R LE++ +R+ GY PD+ FVLHD++ E+K ++L HSEKLAV YG++KLP
Sbjct: 669 HPEVHAVYRYLEQLVHEMRKLGYVPDTKFVLHDMESEQKEYALSTHSEKLAVVYGIMKLP 728
Query: 547 EGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
G IRV KNLR+CGDCH+A K ISKV+ REII+RD RFHHF++G CSC +YW
Sbjct: 729 LGATIRVFKNLRICGDCHNAFKYISKVVDREIIVRDRKRFHHFRNGECSCSNYW 782
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 109/455 (23%), Positives = 193/455 (42%), Gaps = 90/455 (19%)
Query: 43 MLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPK--KNVI 100
++ + + I AR LFD +P+ D+VA T M+ Y G + ++F+ P ++ +
Sbjct: 37 LIDHYCKSFNIPYARYLFDKIPKPDIVAATTMLSAYSAAGNIKLAHQLFNATPMSIRDTV 96
Query: 101 SWTTMISGYVNNNRIDVARKLFEVM------PEKNEVS---------------------- 132
S+ MI+ + +++ A +LF M P+ S
Sbjct: 97 SYNAMITAFSHSHDGHAALQLFVQMKRLGFVPDPFTFSSVLGALSLIADEETHCQQLHCE 156
Query: 133 ---W---------TAMLMGYTQCGR---------IQDAWELFKAMP--MKSVVASNSMIL 169
W A++ Y C + A +LF P + A ++I
Sbjct: 157 VFKWGALSVPSVLNALMSCYVSCASSPLVNSCVLMAAARKLFDEAPPGRRDEPAWTTIIA 216
Query: 170 GLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPS 229
G +N ++ AR + + M + W+ MI Y +G+ E DL M G++++ +
Sbjct: 217 GYVRNDDLVAARELLEGMTDHIAVAWNAMISGYVHRGFYEEAFDLLRRMHSLGIQLDEYT 276
Query: 230 LISVLSVCASLASLDHGRQVHAQLVRCQFDVD----VYVASVLITMYIKCGELVKGKLIF 285
SV+S ++ + GRQVHA ++R + V + LIT+Y +CG+LV+ + +F
Sbjct: 277 YTSVISAASNAGLFNIGRQVHAYVLRTVVQPSGHFVLSVNNALITLYTRCGKLVEARRVF 336
Query: 286 DNFASKDIVMWNSI-------------------------------ISGYAQYGLGEKSLK 314
D KD+V WN+I ISG AQ G GE+ LK
Sbjct: 337 DKMPVKDLVSWNAILSGCVNARRIEEANSIFREMPVRSLLTWTVMISGLAQNGFGEEGLK 396
Query: 315 VFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLL 374
+F++M G+ P D G +++CS G + G+++ S + + ++ +
Sbjct: 397 LFNQMKLEGLEPCDYAYAGAIASCSVLGSLDNGQQL-HSQIIQLGHDSSLSVGNALITMY 455
Query: 375 GRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTH 409
R G VE A + MP+ D++ W +++ A H
Sbjct: 456 SRCGLVEAADTVFLTMPY-VDSVSWNAMIAALAQH 489
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 89/385 (23%), Positives = 160/385 (41%), Gaps = 88/385 (22%)
Query: 4 RNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDA----RR- 58
R+ +WT ++ GYV + A L M + V+W M+ G++ ++A RR
Sbjct: 206 RDEPAWTTIIAGYVRNDDLVAARELLEGMTDHIAVAWNAMISGYVHRGFYEEAFDLLRRM 265
Query: 59 -----------------------LFDM-------------MPEKDVVAQTN--MVLGYCQ 80
LF++ P V N ++ Y +
Sbjct: 266 HSLGIQLDEYTYTSVISAASNAGLFNIGRQVHAYVLRTVVQPSGHFVLSVNNALITLYTR 325
Query: 81 DGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGY 140
G++ E R +FD+MP K+++SW ++SG VN RI+ A +F MP ++ ++WT M+ G
Sbjct: 326 CGKLVEARRVFDKMPVKDLVSWNAILSGCVNARRIEEANSIFREMPVRSLLTWTVMISGL 385
Query: 141 TQCGRIQDAWELFKAMPMK----------------SVVAS-------NSMILGLGQN--- 174
Q G ++ +LF M ++ SV+ S +S I+ LG +
Sbjct: 386 AQNGFGEEGLKLFNQMKLEGLEPCDYAYAGAIASCSVLGSLDNGQQLHSQIIQLGHDSSL 445
Query: 175 -------------GEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKE 221
G V+ A VF M D +W+ MI + G+ ++ I L+ M KE
Sbjct: 446 SVGNALITMYSRCGLVEAADTVFLTMPYVDSVSWNAMIAALAQHGHGVQAIQLYEKMLKE 505
Query: 222 GVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRC---QFDVDVYVASVLITMYIKCGEL 278
+ + + +++LS C+ + GR + C + D Y S LI + + G
Sbjct: 506 DILPDRITFLTILSACSHAGLVKEGRHYFDTMRVCYGITPEEDHY--SRLIDLLCRAGMF 563
Query: 279 VKGKLIFDNFA-SKDIVMWNSIISG 302
+ K + ++ +W ++++G
Sbjct: 564 SEAKNVTESMPFEPGAPIWEALLAG 588
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 107/223 (47%), Gaps = 17/223 (7%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MP +++VSW A++ G V I EA ++F +MP +++++WTVM+ G ++ ++ +LF
Sbjct: 339 MPVKDLVSWNAILSGCVNARRIEEANSIFREMPVRSLLTWTVMISGLAQNGFGEEGLKLF 398
Query: 61 DMMPEKDV----VAQTNMVLGYCQDGRVDEGREIFDEMPK----KNVISWTTMISGYVNN 112
+ M + + A + G +D G+++ ++ + ++ +I+ Y
Sbjct: 399 NQMKLEGLEPCDYAYAGAIASCSVLGSLDNGQQLHSQIIQLGHDSSLSVGNALITMYSRC 458
Query: 113 NRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGL- 171
++ A +F MP + VSW AM+ Q G A +L++ M + ++ L +
Sbjct: 459 GLVEAADTVFLTMPYVDSVSWNAMIAALAQHGHGVQAIQLYEKMLKEDILPDRITFLTIL 518
Query: 172 ---GQNGEVQKARVVFDQMR-----EKDDATWSGMIKVYERKG 206
G V++ R FD MR ++ +S +I + R G
Sbjct: 519 SACSHAGLVKEGRHYFDTMRVCYGITPEEDHYSRLIDLLCRAG 561
Score = 46.6 bits (109), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 58/121 (47%), Gaps = 9/121 (7%)
Query: 240 LASLDH---GRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMW 296
LA L H R VHA ++ F + + LI Y K + + +FD DIV
Sbjct: 6 LAQLSHTSFARAVHAHILTSGFKPFPLIINRLIDHYCKSFNIPYARYLFDKIPKPDIVAA 65
Query: 297 NSIISGYAQYGLGEKSLKVFHEMFSSGVMP--DDVTLVGVLSACSYTGKVKEGREIFESM 354
+++S Y+ G ++K+ H++F++ M D V+ +++A S++ ++F M
Sbjct: 66 TTMLSAYSAAG----NIKLAHQLFNATPMSIRDTVSYNAMITAFSHSHDGHAALQLFVQM 121
Query: 355 K 355
K
Sbjct: 122 K 122
>gi|359483031|ref|XP_002271968.2| PREDICTED: pentatricopeptide repeat-containing protein At4g02750
[Vitis vinifera]
Length = 788
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 212/511 (41%), Positives = 327/511 (63%), Gaps = 1/511 (0%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
+P N VSW M+ G+ G I EA LF QMP +NVV+W M+ ++++ +D+A LF
Sbjct: 228 IPNPNTVSWVTMLCGFARFGKIAEARRLFDQMPIRNVVAWNAMIAAYVQNCHVDEAISLF 287
Query: 61 DMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARK 120
MPEK+ ++ T ++ GY + G++DE R++ ++MP +NV + T MISGYV N R+D AR+
Sbjct: 288 MEMPEKNSISWTTVINGYVRMGKLDEARQLLNQMPYRNVAAQTAMISGYVQNKRMDDARQ 347
Query: 121 LFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKA 180
+F + ++ V W M+ GY+QCGR+ +A LFK M K +V+ N+M+ Q G++ A
Sbjct: 348 IFNQISIRDVVCWNTMIAGYSQCGRMDEALHLFKQMVKKDIVSWNTMVASYAQVGQMDAA 407
Query: 181 RVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASL 240
+F++M+EK+ +W+ +I + G L+ + F LM EG + + + LS CA L
Sbjct: 408 IKIFEEMKEKNIVSWNSLISGLTQNGSYLDALKSFMLMGHEGQKPDQSTFACGLSSCAHL 467
Query: 241 ASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSII 300
A+L G+Q+H +++ + D++V++ LITMY KCG + +L+F + D+V WNS+I
Sbjct: 468 AALQVGKQLHQLVMKSGYATDLFVSNALITMYAKCGSISSAELLFKDIDHFDVVSWNSLI 527
Query: 301 SGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLV 360
+ YA G G ++LK+FH+M GV PD+VT VG+LSACS+ G + +G ++F+ M Y +
Sbjct: 528 AAYALNGNGREALKLFHKMEVEGVAPDEVTFVGILSACSHVGLIDQGLKLFKCMVQAYNI 587
Query: 361 EPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAK 420
EP EHYACMVDLLGRAG++E+A +L+ M +A IWG+LLGACR H L+LA+ AA+
Sbjct: 588 EPLAEHYACMVDLLGRAGRLEEAFQLVRGMKINANAGIWGALLGACRIHGNLELAKFAAE 647
Query: 421 KLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFT 480
KLL+ EP Y+LLSN+ A GR+ +VA +R+ M+++ K PG SWIE++ +VH F
Sbjct: 648 KLLEFEPHKTSNYVLLSNMQAEAGRWDEVARVRRLMKEKGAEKQPGWSWIELQNRVHAFL 707
Query: 481 GRDCVSHPEHPMIMRMLEKIGGLLREAGYCP 511
D +HP + +L + +R CP
Sbjct: 708 SED-PAHPRAVELCHILRSLTAHMRNTAKCP 737
Score = 218 bits (555), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 138/502 (27%), Positives = 252/502 (50%), Gaps = 61/502 (12%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
M +N V+ +M+ + + G I++A LF MP++N+VSW M+ ++ + R+++AR+LF
Sbjct: 41 MTHKNTVTHNSMISAFAKNGRISDARQLFDGMPQRNIVSWNSMIAAYLHNDRVEEARQLF 100
Query: 61 DMMPEKDVVAQT--------------------------------NMVLGYCQDGRVDEGR 88
D MP +D+ + T MV GY ++ + DE R
Sbjct: 101 DKMPTRDLYSWTLMITCYTRNGELAKARNLFNLLPYKWNPVCCNAMVAGYAKNRQFDEAR 160
Query: 89 EIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQD 148
+FD MP K+++SW +M++GY N + + + FE M E++ VSW M+ G+ + G +
Sbjct: 161 RLFDAMPAKDLVSWNSMLTGYTRNGEMRLGLQFFEEMAERDVVSWNLMVDGFVEVGDLNS 220
Query: 149 AWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYE 208
+WE F+ +P + V+ +M+ G + G++ +AR +FDQM ++ W+ MI Y + +
Sbjct: 221 SWEFFEKIPNPNTVSWVTMLCGFARFGKIAEARRLFDQMPIRNVVAWNAMIAAYVQNCHV 280
Query: 209 LEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVL 268
E I LF M ++ N S +V++ + LD RQ+ Q+ +V + +
Sbjct: 281 DEAISLFMEMPEK----NSISWTTVINGYVRMGKLDEARQLLNQMPY----RNVAAQTAM 332
Query: 269 ITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDD 328
I+ Y++ + + IF+ + +D+V WN++I+GY+Q G +++L +F +M V D
Sbjct: 333 ISGYVQNKRMDDARQIFNQISIRDVVCWNTMIAGYSQCGRMDEALHLFKQM----VKKDI 388
Query: 329 VTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIE 388
V+ ++++ + G++ +IFE MK K +V + ++ L + G DA+K
Sbjct: 389 VSWNTMVASYAQVGQMDAAIKIFEEMKEKNIVS-----WNSLISGLTQNGSYLDALKSFM 443
Query: 389 AMPFE---PDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNA-GPYILLSN----IY 440
M E PD + L +C L + K+L QL K+ + +SN +Y
Sbjct: 444 LMGHEGQKPDQSTFACGLSSCAHLAALQV----GKQLHQLVMKSGYATDLFVSNALITMY 499
Query: 441 ASQGRFHDVAELRKNMRKRNVI 462
A G L K++ +V+
Sbjct: 500 AKCGSISSAELLFKDIDHFDVV 521
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 132/470 (28%), Positives = 228/470 (48%), Gaps = 77/470 (16%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVML---------------- 44
MP+RN+VSW +M+ Y+ + EA LF +MP +++ SWT+M+
Sbjct: 72 MPQRNIVSWNSMIAAYLHNDRVEEARQLFDKMPTRDLYSWTLMITCYTRNGELAKARNLF 131
Query: 45 ----------------GGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGR 88
G+ ++ + D+ARRLFD MP KD+V+ +M+ GY ++G + G
Sbjct: 132 NLLPYKWNPVCCNAMVAGYAKNRQFDEARRLFDAMPAKDLVSWNSMLTGYTRNGEMRLGL 191
Query: 89 EIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQD 148
+ F+EM +++V+SW M+ G+V ++ + + FE +P N VSW ML G+ + G+I +
Sbjct: 192 QFFEEMAERDVVSWNLMVDGFVEVGDLNSSWEFFEKIPNPNTVSWVTMLCGFARFGKIAE 251
Query: 149 AWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYE 208
A LF MP+++VVA N+MI QN V +A +F +M EK+ +W+ +I Y R G
Sbjct: 252 ARRLFDQMPIRNVVAWNAMIAAYVQNCHVDEAISLFMEMPEKNSISWTTVINGYVRMGKL 311
Query: 209 LEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQL-VRCQFDVDVYVASV 267
E L M N + +++S +D RQ+ Q+ +R DV +
Sbjct: 312 DEARQLLNQMPYR----NVAAQTAMISGYVQNKRMDDARQIFNQISIR-----DVVCWNT 362
Query: 268 LITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVM-- 325
+I Y +CG + + +F KDIV WN++++ YAQ G + ++K+F EM ++
Sbjct: 363 MIAGYSQCGRMDEALHLFKQMVKKDIVSWNTMVASYAQVGQMDAAIKIFEEMKEKNIVSW 422
Query: 326 -----------------------------PDDVTLVGVLSACSYTGKVKEGREIFE-SMK 355
PD T LS+C++ ++ G+++ + MK
Sbjct: 423 NSLISGLTQNGSYLDALKSFMLMGHEGQKPDQSTFACGLSSCAHLAALQVGKQLHQLVMK 482
Query: 356 SKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
S Y + + ++ + + G + A L + + D + W SL+ A
Sbjct: 483 SGYATDLFVSN--ALITMYAKCGSISSAELLFKDID-HFDVVSWNSLIAA 529
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 80/334 (23%), Positives = 142/334 (42%), Gaps = 55/334 (16%)
Query: 161 VVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQK 220
V N I LG++G++ +A VF M K+ T + MI + + G + LF M +
Sbjct: 15 VFRHNLKITQLGKSGQIDEAIKVFQHMTHKNTVTHNSMISAFAKNGRISDARQLFDGMPQ 74
Query: 221 EGVRVNFPSLISVLSVCASLASLDHGRQVHA-QLVRCQFDVDVYVASVLITMYIKCGELV 279
+ V++ S+I+ A L + R A QL D+Y +++IT Y + GEL
Sbjct: 75 RNI-VSWNSMIA--------AYLHNDRVEEARQLFDKMPTRDLYSWTLMITCYTRNGELA 125
Query: 280 K--------------------------------GKLIFDNFASKDIVMWNSIISGYAQYG 307
K + +FD +KD+V WNS+++GY + G
Sbjct: 126 KARNLFNLLPYKWNPVCCNAMVAGYAKNRQFDEARRLFDAMPAKDLVSWNSMLTGYTRNG 185
Query: 308 LGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHY 367
L+ F EM V+ ++ + G + G + E FE + + P T +
Sbjct: 186 EMRLGLQFFEEMAERDVVSWNLMVDGFVE----VGDLNSSWEFFEKIPN-----PNTVSW 236
Query: 368 ACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEP 427
M+ R G++ +A +L + MP + + W +++ A + +D A +++
Sbjct: 237 VTMLCGFARFGKIAEARRLFDQMPIR-NVVAWNAMIAAYVQNCHVD---EAISLFMEMPE 292
Query: 428 KNAGPYILLSNIYASQGRFHDVAELRKNMRKRNV 461
KN+ + + N Y G+ + +L M RNV
Sbjct: 293 KNSISWTTVINGYVRMGKLDEARQLLNQMPYRNV 326
>gi|357477961|ref|XP_003609266.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355510321|gb|AES91463.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 738
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 246/649 (37%), Positives = 368/649 (56%), Gaps = 54/649 (8%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQM----PEKNVVSWTVMLGGFIRDSRIDDARR 58
+ NV W +++RGY + LF +M + N ++ + + + ++
Sbjct: 93 KHNVFIWNSLIRGYSLSSSPLSSLHLFSRMLYYGVQPNSHTFPFLFKSCTKAKATHEGKQ 152
Query: 59 L----FDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNR 114
L + + T+++ Y G +D R +FD+ ++ +S+T +I+GYV+
Sbjct: 153 LHAHALKLALHFNPHVHTSVIHMYASVGEMDFARLVFDKSSLRDAVSFTALITGYVSQGC 212
Query: 115 IDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMIL----- 169
+D AR+LF+ +P K+ VSW AM+ GY Q GR ++A F M +V+ + S ++
Sbjct: 213 LDDARRLFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYEMQEANVLPNKSTMVVVLSA 272
Query: 170 --------------------GLGQN--------------GEVQKARVVFDQMREKDDATW 195
G G N GE AR +FD + EKD +W
Sbjct: 273 CGHTRSGELGKWIGSWVRDNGFGSNLQLTNALIDMYCKCGETDIARELFDGIEEKDVISW 332
Query: 196 SGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQL-- 253
+ MI Y E + LF +M + V+ N + + +L CA L +LD G+ VHA +
Sbjct: 333 NTMIGGYSYLSLYEEALALFEVMLRSNVKPNDVTFLGILHACACLGALDLGKWVHAYIDK 392
Query: 254 -VRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKS 312
+R + ++ + LI MY KCG + + +F + S+++ WN+++SG+A +G E++
Sbjct: 393 NLRNSSNASLWTS--LIDMYAKCGCIEAAERVFRSMHSRNLASWNAMLSGFAMHGHAERA 450
Query: 313 LKVFHEMFSSGVM-PDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMV 371
L +F EM + G+ PDD+T VGVLSAC+ G V G + F SM Y + PK +HY CM+
Sbjct: 451 LALFSEMVNKGLFRPDDITFVGVLSACTQAGLVDLGHQYFRSMIQDYGISPKLQHYGCMI 510
Query: 372 DLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAG 431
DLL RA + E+A L++ M EPD IWGSLL AC+ H +++ E A++L QLEP+NAG
Sbjct: 511 DLLARAEKFEEAEILMKNMEMEPDGAIWGSLLSACKAHGRVEFGEYVAERLFQLEPENAG 570
Query: 432 PYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHP 491
++LLSNIYA GR+ DVA +R + + + K PGC+ IE++ VH F D HPE
Sbjct: 571 AFVLLSNIYAGAGRWDDVARIRTRLNDKGMKKVPGCTSIEIDGDVHEFLVGDKF-HPECN 629
Query: 492 MIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPI 551
I +ML ++ LL E G+ P++S VL+D+DEE K +L HSEKLA+++GL+K G I
Sbjct: 630 NIYKMLNEVDKLLEENGFVPNTSEVLYDMDEEWKEGALSQHSEKLAISFGLIKTKPGTTI 689
Query: 552 RVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
R++KNLRVCG+CHSA KLISK+ REII RD NRFHHFKDG CSC D W
Sbjct: 690 RIVKNLRVCGNCHSATKLISKIFNREIIARDRNRFHHFKDGFCSCNDCW 738
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 89/353 (25%), Positives = 159/353 (45%), Gaps = 46/353 (13%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVV----SWTVML------------ 44
+P ++VVSW AM+ GYV+ G EA F++M E NV+ + V+L
Sbjct: 223 IPVKDVVSWNAMISGYVQSGRFEEAIVCFYEMQEANVLPNKSTMVVVLSACGHTRSGELG 282
Query: 45 ---GGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLG-YCQDGRVDEGREIFDEMPKKNVI 100
G ++RD+ +L TN ++ YC+ G D RE+FD + +K+VI
Sbjct: 283 KWIGSWVRDNGFGSNLQL------------TNALIDMYCKCGETDIARELFDGIEEKDVI 330
Query: 101 SWTTMISGYVNNNRIDVARKLFEVM----PEKNEVSWTAML-----MGYTQCGRIQDAWE 151
SW TMI GY + + A LFEVM + N+V++ +L +G G+ A+
Sbjct: 331 SWNTMIGGYSYLSLYEEALALFEVMLRSNVKPNDVTFLGILHACACLGALDLGKWVHAYI 390
Query: 152 LFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEV 211
+ S+I + G ++ A VF M ++ A+W+ M+ + G+
Sbjct: 391 DKNLRNSSNASLWTSLIDMYAKCGCIEAAERVFRSMHSRNLASWNAMLSGFAMHGHAERA 450
Query: 212 IDLFTLMQKEGV-RVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVA--SVL 268
+ LF+ M +G+ R + + + VLS C +D G Q +++ + + + +
Sbjct: 451 LALFSEMVNKGLFRPDDITFVGVLSACTQAGLVDLGHQYFRSMIQ-DYGISPKLQHYGCM 509
Query: 269 ITMYIKCGELVKGKLIFDNFA-SKDIVMWNSIISGYAQYGLGEKSLKVFHEMF 320
I + + + + +++ N D +W S++S +G E V +F
Sbjct: 510 IDLLARAEKFEEAEILMKNMEMEPDGAIWGSLLSACKAHGRVEFGEYVAERLF 562
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 123/266 (46%), Gaps = 36/266 (13%)
Query: 174 NGEVQKARVVFD---QMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSL 230
+G++ A +F+ Q + + W+ +I+ Y L + LF+ M GV+ N +
Sbjct: 75 SGDLSYALSLFEENQQHHKHNVFIWNSLIRGYSLSSSPLSSLHLFSRMLYYGVQPNSHTF 134
Query: 231 ISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFD---- 286
+ C + G+Q+HA ++ + +V + +I MY GE+ +L+FD
Sbjct: 135 PFLFKSCTKAKATHEGKQLHAHALKLALHFNPHVHTSVIHMYASVGEMDFARLVFDKSSL 194
Query: 287 ----NFAS-----------------------KDIVMWNSIISGYAQYGLGEKSLKVFHEM 319
+F + KD+V WN++ISGY Q G E+++ F+EM
Sbjct: 195 RDAVSFTALITGYVSQGCLDDARRLFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYEM 254
Query: 320 FSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQ 379
+ V+P+ T+V VLSAC +T + G+ I ++ + ++D+ + G+
Sbjct: 255 QEANVLPNKSTMVVVLSACGHTRSGELGKWIGSWVRDNGF-GSNLQLTNALIDMYCKCGE 313
Query: 380 VEDAMKLIEAMPFEPDAIIWGSLLGA 405
+ A +L + + E D I W +++G
Sbjct: 314 TDIARELFDGIE-EKDVISWNTMIGG 338
>gi|356569774|ref|XP_003553071.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 775
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 239/627 (38%), Positives = 361/627 (57%), Gaps = 43/627 (6%)
Query: 16 YVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMV 75
Y G + A +F + P ++VSW +L G+++ +++A R+F+ MPE++ +A +M+
Sbjct: 150 YAVCGSVGSARRVFEESPVLDLVSWNTLLAGYVQAGEVEEAERVFEGMPERNTIASNSMI 209
Query: 76 LGYCQDGRVDEGREIFDEMP--KKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVS- 132
+ + G V++ R IF+ + +++++SW+ M+S Y N + A LF M
Sbjct: 210 ALFGRKGCVEKARRIFNGVRGRERDMVSWSAMVSCYEQNEMGEEALVLFVEMKGSGVAVD 269
Query: 133 ---------------------W-----------------TAMLMGYTQCGRIQDAWELFK 154
W A++ Y+ CG I DA +F
Sbjct: 270 EVVVVSALSACSRVLNVEMGRWVHGLAVKVGVEDYVSLKNALIHLYSSCGEIVDARRIFD 329
Query: 155 -AMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVID 213
+ +++ NSMI G + G +Q A ++F M EKD +WS MI Y + E +
Sbjct: 330 DGGELLDLISWNSMISGYLRCGSIQDAEMLFYSMPEKDVVSWSAMISGYAQHECFSEALA 389
Query: 214 LFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYI 273
LF MQ GVR + +L+S +S C LA+LD G+ +HA + R + V+V +++ LI MY+
Sbjct: 390 LFQEMQLHGVRPDETALVSAISACTHLATLDLGKWIHAYISRNKLQVNVILSTTLIDMYM 449
Query: 274 KCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVG 333
KCG + +F K + WN++I G A G E+SL +F +M +G +P+++T +G
Sbjct: 450 KCGCVENALEVFYAMEEKGVSTWNAVILGLAMNGSVEQSLNMFADMKKTGTVPNEITFMG 509
Query: 334 VLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFE 393
VL AC + G V +GR F SM ++ +E +HY CMVDLLGRAG +++A +LI++MP
Sbjct: 510 VLGACRHMGLVNDGRHYFNSMIHEHKIEANIKHYGCMVDLLGRAGLLKEAEELIDSMPMA 569
Query: 394 PDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELR 453
PD WG+LLGACR H ++ E +KL+QL+P + G ++LLSNIYAS+G + +V E+R
Sbjct: 570 PDVATWGALLGACRKHRDNEMGERLGRKLIQLQPDHDGFHVLLSNIYASKGNWGNVLEIR 629
Query: 454 KNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDS 513
M + V+K PGCS IE VH F D +HP+ I ML+ + L+ GY P +
Sbjct: 630 GIMAQHGVVKTPGCSMIEANGTVHEFLAGD-KTHPQINDIEHMLDVVAAKLKIEGYVPTT 688
Query: 514 SFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKV 573
S V D+DEEEK +L HSEKLAVA+GL+ + PIRV KNLR+C DCH+ +KLISK
Sbjct: 689 SEVSLDIDEEEKETALFRHSEKLAVAFGLITISPPTPIRVTKNLRICNDCHTVVKLISKA 748
Query: 574 MGREIILRDANRFHHFKDGLCSCRDYW 600
R+I++RD +RFHHFK G CSC D+W
Sbjct: 749 FDRDIVVRDRHRFHHFKHGACSCMDFW 775
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 111/372 (29%), Positives = 187/372 (50%), Gaps = 42/372 (11%)
Query: 72 TNMVLGYCQDGRVDE--GREIFDEMPKK----NVISWTTMISGYVNNNRIDVARKLFEVM 125
T +L C RV E GR++ +V T+++ Y + AR++FE
Sbjct: 107 TYPILLQCCAARVSEFEGRQLHAHAVSSGFDGDVYVRNTLMNLYAVCGSVGSARRVFEES 166
Query: 126 PEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFD 185
P + VSW +L GY Q G +++A +F+ MP ++ +ASNSMI G+ G V+KAR +F+
Sbjct: 167 PVLDLVSWNTLLAGYVQAGEVEEAERVFEGMPERNTIASNSMIALFGRKGCVEKARRIFN 226
Query: 186 QM--REKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASL 243
+ RE+D +WS M+ YE+ E + LF M+ GV V+ ++S LS C+ + ++
Sbjct: 227 GVRGRERDMVSWSAMVSCYEQNEMGEEALVLFVEMKGSGVAVDEVVVVSALSACSRVLNV 286
Query: 244 DHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDN---------------- 287
+ GR VH V+ + V + + LI +Y CGE+V + IFD+
Sbjct: 287 EMGRWVHGLAVKVGVEDYVSLKNALIHLYSSCGEIVDARRIFDDGGELLDLISWNSMISG 346
Query: 288 ----------------FASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTL 331
KD+V W+++ISGYAQ+ ++L +F EM GV PD+ L
Sbjct: 347 YLRCGSIQDAEMLFYSMPEKDVVSWSAMISGYAQHECFSEALALFQEMQLHGVRPDETAL 406
Query: 332 VGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMP 391
V +SAC++ + G+ I + S+ ++ ++D+ + G VE+A+++ AM
Sbjct: 407 VSAISACTHLATLDLGKWI-HAYISRNKLQVNVILSTTLIDMYMKCGCVENALEVFYAME 465
Query: 392 FEPDAIIWGSLL 403
E W +++
Sbjct: 466 -EKGVSTWNAVI 476
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 85/383 (22%), Positives = 161/383 (42%), Gaps = 83/383 (21%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM--PEKNVVSWTVMLGGFIRDSRIDDARR 58
MPERN ++ +M+ + +G + +A +F + E+++VSW+ M+ + ++ ++A
Sbjct: 197 MPERNTIASNSMIALFGRKGCVEKARRIFNGVRGRERDMVSWSAMVSCYEQNEMGEEALV 256
Query: 59 LFDMMPE--------------------------------------KDVVAQTNMVLG-YC 79
LF M +D V+ N ++ Y
Sbjct: 257 LFVEMKGSGVAVDEVVVVSALSACSRVLNVEMGRWVHGLAVKVGVEDYVSLKNALIHLYS 316
Query: 80 QDGRVDEGREIFDEMPK-KNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLM 138
G + + R IFD+ + ++ISW +MISGY+ I A LF MPEK+ VSW+AM+
Sbjct: 317 SCGEIVDARRIFDDGGELLDLISWNSMISGYLRCGSIQDAEMLFYSMPEKDVVSWSAMIS 376
Query: 139 GYTQCGRIQDAWELFKAMPMK--------------------------------------- 159
GY Q +A LF+ M +
Sbjct: 377 GYAQHECFSEALALFQEMQLHGVRPDETALVSAISACTHLATLDLGKWIHAYISRNKLQV 436
Query: 160 SVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQ 219
+V+ S ++I + G V+ A VF M EK +TW+ +I G + +++F M+
Sbjct: 437 NVILSTTLIDMYMKCGCVENALEVFYAMEEKGVSTWNAVILGLAMNGSVEQSLNMFADMK 496
Query: 220 KEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVR-CQFDVDVYVASVLITMYIKCGEL 278
K G N + + VL C + ++ GR ++ + + ++ ++ + + G L
Sbjct: 497 KTGTVPNEITFMGVLGACRHMGLVNDGRHYFNSMIHEHKIEANIKHYGCMVDLLGRAGLL 556
Query: 279 VKGKLIFDNFA-SKDIVMWNSII 300
+ + + D+ + D+ W +++
Sbjct: 557 KEAEELIDSMPMAPDVATWGALL 579
>gi|302760949|ref|XP_002963897.1| hypothetical protein SELMODRAFT_80086 [Selaginella moellendorffii]
gi|300169165|gb|EFJ35768.1| hypothetical protein SELMODRAFT_80086 [Selaginella moellendorffii]
Length = 714
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 223/636 (35%), Positives = 346/636 (54%), Gaps = 37/636 (5%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MP +N VS+ ++ + +G + EA LF M ++ +W V++ G+ + AR +F
Sbjct: 80 MPYKNTVSYNTLISAFARQGNLAEARNLFNSMKIRDAATWNVLIAGYTQRCLCTHAREIF 139
Query: 61 DMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARK 120
D P ++VV M+ GY Q G +D E+F MP+ N + W +ISG N R+ A +
Sbjct: 140 DRAPVRNVVTWNTMIGGYAQAGHLDNATELFGLMPQWNEVCWNALISGMGRNRRLPDALE 199
Query: 121 LFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKA 180
LF+ +P ++ VSW AM+ G G + AW+LFK MP+ VV +++ +G +Q+A
Sbjct: 200 LFQALPFRDMVSWIAMIQGCVHSGDLHRAWDLFKRMPLTDVVIWTAIVTAFAHSGFLQEA 259
Query: 181 RVVFDQMREKDDA--------------------------------TWSGMIKVYERKGYE 208
R +FD + KD A +W+ ++ + + G+
Sbjct: 260 RDLFDAIPIKDAAAVNAMIAAYGLHGEIARAKDLFDSAGDLRDVISWNALLAAFSQNGHA 319
Query: 209 LEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLV---RCQFDVDVYVA 265
+ + +F M EG+ + S +S L C L +L G+ +H +L+ + + V+ +A
Sbjct: 320 RQALGIFAGMDLEGIHPDGISFVSALDACTILTALREGKLLHEELLLASQGEIFVEASLA 379
Query: 266 SVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVM 325
+ L+ Y KCG L + + +FD A D ++ NS++ YAQ G ++ +F SG+
Sbjct: 380 TALVNFYAKCGRLDEARSLFDAMAFCDAILLNSMLGAYAQSGRAGEAADLFQRAILSGIH 439
Query: 326 PDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMK 385
PD VT V ++SACS+ G + G F S+ + + P HY CMVDLL R G + D
Sbjct: 440 PDAVTFVSMVSACSHAGLLDLGHRYFLSLVGDFALAPHAAHYTCMVDLLARTGHLMDGED 499
Query: 386 LIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGR 445
L++AMPF+P+ W SLL CRTH + A++ P + PY+LLS +Y + G+
Sbjct: 500 LLDAMPFQPEYTAWKSLLAGCRTHGDVGRGARLARRATNANPVCSSPYVLLSRLYDAAGK 559
Query: 446 FHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLR 505
D +RK M R + KP G S I ++ + H F +HPE I+ L + +R
Sbjct: 560 HGDGISVRKAMDARRLRKPAGLSSITIKGRAHEFVAGG-KNHPEISAILDELHSLNAKMR 618
Query: 506 EAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKL-PEGVPIRVMKNLRVCGDCH 564
EAGY PD+S VLHD D+EEK SL +HSEKLAV +G++ P+ V+KNLR+C DCH
Sbjct: 619 EAGYVPDTSNVLHDFDDEEKEQSLSFHSEKLAVVFGMISTRGRSDPLFVVKNLRMCTDCH 678
Query: 565 SAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
+A K +S++ R I +RDA+RFHHF+DG C+C D+W
Sbjct: 679 TATKFMSRIAKRAITVRDAHRFHHFQDGACACADFW 714
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 118/430 (27%), Positives = 197/430 (45%), Gaps = 55/430 (12%)
Query: 16 YVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMV 75
Y G + +A F + S VM+ + ++ +D A R FD P KDVV+ M+
Sbjct: 2 YGRCGCVADAVICFDSIRNPTAFSHNVMVAAYAQNGYLDLAARTFDRTPNKDVVSWNGML 61
Query: 76 LGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVM---------- 125
GY + G + + FDEMP KN +S+ T+IS + + AR LF M
Sbjct: 62 SGYARYGSFRDAKLFFDEMPYKNTVSYNTLISAFARQGNLAEARNLFNSMKIRDAATWNV 121
Query: 126 ---------------------PEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVAS 164
P +N V+W M+ GY Q G + +A ELF MP + V
Sbjct: 122 LIAGYTQRCLCTHAREIFDRAPVRNVVTWNTMIGGYAQAGHLDNATELFGLMPQWNEVCW 181
Query: 165 NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVR 224
N++I G+G+N + A +F + +D +W MI+ G DLF M V
Sbjct: 182 NALISGMGRNRRLPDALELFQALPFRDMVSWIAMIQGCVHSGDLHRAWDLFKRMPLTDV- 240
Query: 225 VNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDV----DVYVASVLITMYIKCGELVK 280
V + ++++ + L Q R FD D + +I Y GE+ +
Sbjct: 241 VIWTAIVTAFAHSGFL-----------QEARDLFDAIPIKDAAAVNAMIAAYGLHGEIAR 289
Query: 281 GKLIFDNFAS-KDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACS 339
K +FD+ +D++ WN++++ ++Q G ++L +F M G+ PD ++ V L AC+
Sbjct: 290 AKDLFDSAGDLRDVISWNALLAAFSQNGHARQALGIFAGMDLEGIHPDGISFVSALDACT 349
Query: 340 YTGKVKEGREIFESM----KSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPD 395
++EG+ + E + + + VE +V+ + G++++A L +AM F D
Sbjct: 350 ILTALREGKLLHEELLLASQGEIFVEASLA--TALVNFYAKCGRLDEARSLFDAMAF-CD 406
Query: 396 AIIWGSLLGA 405
AI+ S+LGA
Sbjct: 407 AILLNSMLGA 416
Score = 47.0 bits (110), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 57/134 (42%), Gaps = 10/134 (7%)
Query: 271 MYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVT 330
MY +CG + + FD+ + N +++ YAQ G + + + F + V V+
Sbjct: 1 MYGRCGCVADAVICFDSIRNPTAFSHNVMVAAYAQNGYLDLAARTFDRTPNKDV----VS 56
Query: 331 LVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAM 390
G+LS + G ++ + F+ M K T Y ++ R G + +A L +M
Sbjct: 57 WNGMLSGYARYGSFRDAKLFFDEMPYK-----NTVSYNTLISAFARQGNLAEARNLFNSM 111
Query: 391 PFEPDAIIWGSLLG 404
DA W L+
Sbjct: 112 KIR-DAATWNVLIA 124
>gi|224143620|ref|XP_002325018.1| predicted protein [Populus trichocarpa]
gi|222866452|gb|EEF03583.1| predicted protein [Populus trichocarpa]
Length = 695
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 237/629 (37%), Positives = 363/629 (57%), Gaps = 45/629 (7%)
Query: 16 YVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMV 75
Y + G I+ A LF +M +++ SW ML + + ++D R +FD MP +D V+ ++
Sbjct: 68 YAKSGEISHARKLFDEMTQRDNFSWNAMLSLYAKSGLVEDLRVIFDNMPSRDSVSYNTVI 127
Query: 76 LGYCQDGRVDEGREIFDEMPKK-------------------------------------- 97
G+ +GR +F M K+
Sbjct: 128 SGFAGNGRGGPALGVFLRMQKEGLKPTEYTHVSVLNACTQLLDLRRGKQIHGRIIICNLG 187
Query: 98 -NVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAM 156
NV + Y ID AR+LF+ M +N V+W M+ GY + + + +LF M
Sbjct: 188 GNVFVCNALTDLYARCGEIDQARRLFDRMVIRNVVTWNLMISGYLKNRQPEKCIDLFHEM 247
Query: 157 PMKSV----VASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVI 212
+ ++ V ++S++ Q G + +AR VF ++REKD+ W+ MI + G E + +
Sbjct: 248 QVSNLKPDQVTASSVLGAYIQAGYIDEARKVFGEIREKDEVCWTIMIVGCAQNGKEEDAL 307
Query: 213 DLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMY 272
LF+ M E R + ++ SV+S CA LASL HG+ VH + + D+ V+S L+ MY
Sbjct: 308 LLFSEMLLENARPDGYTISSVVSSCAKLASLYHGQVVHGKAFLMGVNDDLLVSSALVDMY 367
Query: 273 IKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLV 332
KCG IF ++++V WNS+I GYA G ++L ++ M + PD VT V
Sbjct: 368 CKCGVTRDAWTIFSTMQTRNVVSWNSMIGGYALNGQDLEALSLYENMLEENLKPDSVTFV 427
Query: 333 GVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPF 392
GVLSAC + G V+EG+E F SM ++ +EP +HYACMV+L GR+G ++ A+ LI +M
Sbjct: 428 GVLSACVHAGLVEEGKEYFCSMSDQHGLEPTPDHYACMVNLFGRSGHMDKAVDLISSMSQ 487
Query: 393 EPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAEL 452
EP+++IW ++L C + E+AA+ L++L P NA PYI+LSN+YA++GR+ DVA +
Sbjct: 488 EPNSLIWTTVLSVCVMKGDIKHGEMAARCLIELNPFNAVPYIMLSNMYAARGRWKDVASI 547
Query: 453 RKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPD 512
R M+ ++V K SWIE++ +VH F D +HP+ +I L ++ L+EAG+ P+
Sbjct: 548 RSLMKSKHVKKFSAYSWIEIDNEVHKFVADD-RTHPDAKIIHVQLNRLIRKLQEAGFSPN 606
Query: 513 SSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGV-PIRVMKNLRVCGDCHSAIKLIS 571
++ VLHD E+EK+ S+ YHSEKLA+AYGL+K P GV PIR++KN+R C DCH +K +S
Sbjct: 607 TNLVLHDFGEDEKLESINYHSEKLALAYGLIKKPHGVTPIRIIKNIRTCADCHIFMKFVS 666
Query: 572 KVMGREIILRDANRFHHFKDGLCSCRDYW 600
+ R +ILRD+NRFHHF +G CSC+DYW
Sbjct: 667 NITRRPVILRDSNRFHHFVEGKCSCKDYW 695
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 105/362 (29%), Positives = 168/362 (46%), Gaps = 40/362 (11%)
Query: 105 MISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVAS 164
+++ Y + I ARKLF+ M +++ SW AML Y + G ++D +F MP + V+
Sbjct: 64 LLNLYAKSGEISHARKLFDEMTQRDNFSWNAMLSLYAKSGLVEDLRVIFDNMPSRDSVSY 123
Query: 165 NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVR 224
N++I G NG R G L V F MQKEG++
Sbjct: 124 NTVISGFAGNG----------------------------RGGPALGV---FLRMQKEGLK 152
Query: 225 VNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLI 284
+ +SVL+ C L L G+Q+H +++ C +V+V + L +Y +CGE+ + + +
Sbjct: 153 PTEYTHVSVLNACTQLLDLRRGKQIHGRIIICNLGGNVFVCNALTDLYARCGEIDQARRL 212
Query: 285 FDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKV 344
FD +++V WN +ISGY + EK + +FHEM S + PD VT VL A G +
Sbjct: 213 FDRMVIRNVVTWNLMISGYLKNRQPEKCIDLFHEMQVSNLKPDQVTASSVLGAYIQAGYI 272
Query: 345 KEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFE---PDAIIWGS 401
E R++F ++ K V + M+ + G+ EDA+ L M E PD S
Sbjct: 273 DEARKVFGEIREKDEV-----CWTIMIVGCAQNGKEEDALLLFSEMLLENARPDGYTISS 327
Query: 402 LLGACRTHMKLDLAEVA-AKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRN 460
++ +C L +V K L + L ++Y G D + M+ RN
Sbjct: 328 VVSSCAKLASLYHGQVVHGKAFLMGVNDDLLVSSALVDMYCKCGVTRDAWTIFSTMQTRN 387
Query: 461 VI 462
V+
Sbjct: 388 VV 389
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/203 (21%), Positives = 85/203 (41%), Gaps = 38/203 (18%)
Query: 237 CASLASLDHGRQVHAQLVRCQFDV-DVYVASVLITMYIKCGELVKGKLIFDNFASKDIVM 295
C + +D +++ + + F D ++ + L+ +Y K GE+ + +FD +D
Sbjct: 32 CFRASDVDQAKRLKSHMHLHLFKPNDTFIHNRLLNLYAKSGEISHARKLFDEMTQRDNFS 91
Query: 296 WNSIISGYAQYGL-------------------------------GEKSLKVFHEMFSSGV 324
WN+++S YA+ GL G +L VF M G+
Sbjct: 92 WNAMLSLYAKSGLVEDLRVIFDNMPSRDSVSYNTVISGFAGNGRGGPALGVFLRMQKEGL 151
Query: 325 MPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYAC--MVDLLGRAGQVED 382
P + T V VL+AC+ ++ G++I + + + C + DL R G+++
Sbjct: 152 KPTEYTHVSVLNACTQLLDLRRGKQIHGRI---IICNLGGNVFVCNALTDLYARCGEIDQ 208
Query: 383 AMKLIEAMPFEPDAIIWGSLLGA 405
A +L + M + + W ++
Sbjct: 209 ARRLFDRMVIR-NVVTWNLMISG 230
>gi|357129337|ref|XP_003566320.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Brachypodium distachyon]
Length = 661
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 249/612 (40%), Positives = 343/612 (56%), Gaps = 40/612 (6%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMP----EKNVVSWTVMLGGFIRDSR-IDD 55
MPE+NVV W+A++ GY G A L QM E NV++W ++ G R R +D
Sbjct: 78 MPEKNVVGWSALIAGYSARGDAEAAWGLLEQMRSAGVEPNVITWNGLVSGLNRSGRALDA 137
Query: 56 ARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRI 115
L M E T + G V E +S + GYV +
Sbjct: 138 VTALVRMHSEGFFPDATGVSCALSAVGDVKE-------------VSVGKQVHGYV----V 180
Query: 116 DVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNG 175
+L + TA++ Y +CGR + +F V + N+++ GL +N
Sbjct: 181 KAGCRL-------DACVVTALIDMYGKCGRADEIVRVFHESSHMDVASCNALVAGLSRNA 233
Query: 176 EVQKARVVFDQM----REKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLI 231
+V +A ++F + E + +W+ ++ + G +LE +DLF MQ GV N ++
Sbjct: 234 QVSEALLLFREFICRGVELNVVSWTSIVACCVQNGRDLEAVDLFRTMQSIGVEPNSVTIP 293
Query: 232 SVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASK 291
VL A++A+L HGR H +R F DVYV S L+ MY KCG+ + IFD S+
Sbjct: 294 CVLPAFANVAALMHGRSAHCFSLRKGFLHDVYVGSALVDMYAKCGKARHARTIFDAMPSR 353
Query: 292 DIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIF 351
++V WN++I GYA +G ++++F M PD VT VL ACS G +EGR F
Sbjct: 354 NVVSWNAMIGGYAMHGDAANAVQLFCSMQKCKQKPDLVTFTCVLGACSQAGLTEEGRRYF 413
Query: 352 ESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMK 411
M+ + + P+ EHYACMV LLGR+G++++A LI MPFEPD+ IWGSLLG+CR +
Sbjct: 414 NEMQQGHGISPRMEHYACMVTLLGRSGKLDEAYDLINEMPFEPDSCIWGSLLGSCRVYGN 473
Query: 412 LDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIE 471
+ LAEVAA+KL QLEP NAG Y+LLSNIYAS+ + V +R M+ + K GCSWIE
Sbjct: 474 VLLAEVAAEKLFQLEPGNAGNYVLLSNIYASKKMWDGVNRVRDEMKNMGLKKEKGCSWIE 533
Query: 472 VEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGL---LREAGYCPDSSFVLHDVDEEEKVHS 528
++ KVHM D HPM+ + EK+ L + G+ P FVLHDV+E+EK +
Sbjct: 534 IKNKVHMLLAGD----NSHPMMTAITEKLNQLTIEMNRLGFAPSRDFVLHDVEEQEKDNI 589
Query: 529 LRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHH 588
L HSEKLAVA GL+ G P+RV+KNLR+CGDCH A+K IS REI +RD NRFHH
Sbjct: 590 LAVHSEKLAVALGLISTRPGTPLRVIKNLRICGDCHEAMKFISSFEQREISVRDTNRFHH 649
Query: 589 FKDGLCSCRDYW 600
FKDG CSC DYW
Sbjct: 650 FKDGKCSCGDYW 661
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 76/158 (48%), Gaps = 2/158 (1%)
Query: 225 VNFPSLISVL-SVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKL 283
V+FP +L S S + R +HA V D +VAS L+ YI+ G +
Sbjct: 14 VSFPPDPHLLPSALKSCPAQPLARALHAAAVVSGLAEDPFVASSLLHSYIRLGATGAARS 73
Query: 284 IFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGK 343
+FD K++V W+++I+GY+ G E + + +M S+GV P+ +T G++S + +G+
Sbjct: 74 VFDRMPEKNVVGWSALIAGYSARGDAEAAWGLLEQMRSAGVEPNVITWNGLVSGLNRSGR 133
Query: 344 VKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVE 381
+ M S+ P +C + +G +V
Sbjct: 134 ALDAVTALVRMHSEGFF-PDATGVSCALSAVGDVKEVS 170
>gi|357138408|ref|XP_003570784.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Brachypodium distachyon]
Length = 750
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 245/680 (36%), Positives = 378/680 (55%), Gaps = 81/680 (11%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGF------------- 47
MP RN+V+ +++ G++ + LF +P+++ VS+ +L GF
Sbjct: 72 MPGRNLVTGNSLLSALARAGLVRDMERLFTSLPQRDAVSYNALLAGFSRAGAHARAAGAY 131
Query: 48 ---------IRDSRID------DARRLFDMMPEKDVVAQ-------------TNMVLGYC 79
+R SRI A L D + V Q + +V Y
Sbjct: 132 VALLRDEAGVRPSRITMSGVVMVASALGDRALGRQVHCQILRLGFGAYAFTGSPLVDMYA 191
Query: 80 QDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMG 139
+ G + + R +FDEM KNV+ TMI+G + + AR LFE + E++ ++WT M+ G
Sbjct: 192 KVGPIGDARRVFDEMEGKNVVMCNTMITGLLRCKMVAEARALFEAIEERDSITWTTMVTG 251
Query: 140 YTQCGRIQDAWELFKAM----------PMKSVVASNSMILGLGQNGEVQK---------- 179
TQ G +A ++F+ M S++ + + L + ++
Sbjct: 252 LTQNGLESEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTCYEDN 311
Query: 180 -------------------ARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQK 220
A VF +M K+ +W+ MI Y + G E + +F+ MQ+
Sbjct: 312 VFVGSALVDMYSKCRSVRLAEAVFRRMMWKNIISWTAMIVGYGQNGCGEEAVRVFSEMQR 371
Query: 221 EGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVK 280
+G++ + +L SV+S CA+LASL+ G Q H + V V++ L+T+Y KCG +
Sbjct: 372 DGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLRPYVTVSNALVTLYGKCGSIED 431
Query: 281 GKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSY 340
+FD + D V W +++ GYAQ+G ++++ +F +M S GV PD VT +GVLSACS
Sbjct: 432 AHRLFDEMSFHDQVSWTALVMGYAQFGKAKETIDLFEKMLSKGVKPDGVTFIGVLSACSR 491
Query: 341 TGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWG 400
+G V +GR F SM+ + + P +HY CM+DL R+G ++ A + I+ MP PDA W
Sbjct: 492 SGLVDKGRSYFHSMQQDHDIVPLDDHYTCMIDLYSRSGWLKQAEEFIKQMPRCPDAFGWA 551
Query: 401 SLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRN 460
+LL ACR +++ + AA+ LL+L+P+N Y+LL +++AS+G ++DVA+LR+ MR R
Sbjct: 552 TLLSACRLRGDMEIGKWAAENLLKLDPQNPASYVLLCSMHASKGEWNDVAKLRRGMRDRQ 611
Query: 461 VIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDV 520
V K PGCSWI+ + KVH+F+ D SHP I L+ + + E GY PD S VLHDV
Sbjct: 612 VKKEPGCSWIKYKNKVHIFSADD-QSHPFSRTIYEKLQWLNSKMVEEGYKPDVSSVLHDV 670
Query: 521 DEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIIL 580
+ EKVH L +HSEKLA+A+GL+ +P +PIR++KNLRVC DCH+A K ISK+ GR+I++
Sbjct: 671 ADAEKVHMLSHHSEKLAIAFGLIFVPPEMPIRIVKNLRVCVDCHNATKFISKITGRDILV 730
Query: 581 RDANRFHHFKDGLCSCRDYW 600
RDA RFH F +G+CSC D+W
Sbjct: 731 RDAVRFHKFSNGICSCGDFW 750
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 118/404 (29%), Positives = 211/404 (52%), Gaps = 12/404 (2%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVV 69
++ Y G++ A +F MP +N+V+ +L R + D RLF +P++D V
Sbjct: 50 NTLLTAYASSGLLPHARRVFDAMPGRNLVTGNSLLSALARAGLVRDMERLFTSLPQRDAV 109
Query: 70 AQTNMVLGYCQDGRVDEGREIF-----DEM---PKKNVISWTTMISGYVNNNRI--DVAR 119
+ ++ G+ + G + DE P + +S M++ + + + V
Sbjct: 110 SYNALLAGFSRAGAHARAAGAYVALLRDEAGVRPSRITMSGVVMVASALGDRALGRQVHC 169
Query: 120 KLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQK 179
++ + + + ++ Y + G I DA +F M K+VV N+MI GL + V +
Sbjct: 170 QILRLGFGAYAFTGSPLVDMYAKVGPIGDARRVFDEMEGKNVVMCNTMITGLLRCKMVAE 229
Query: 180 ARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCAS 239
AR +F+ + E+D TW+ M+ + G E E +D+F M+ EGV ++ + S+L+ C +
Sbjct: 230 ARALFEAIEERDSITWTTMVTGLTQNGLESEALDVFRRMRAEGVGIDQYTFGSILTACGA 289
Query: 240 LASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSI 299
LA+L+ G+Q+HA + R ++ +V+V S L+ MY KC + + +F K+I+ W ++
Sbjct: 290 LAALEEGKQIHAYITRTCYEDNVFVGSALVDMYSKCRSVRLAEAVFRRMMWKNIISWTAM 349
Query: 300 ISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYL 359
I GY Q G GE++++VF EM G+ PDD TL V+S+C+ ++EG + F +
Sbjct: 350 IVGYGQNGCGEEAVRVFSEMQRDGIKPDDFTLGSVISSCANLASLEEGAQ-FHCLALVSG 408
Query: 360 VEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
+ P +V L G+ G +EDA +L + M F D + W +L+
Sbjct: 409 LRPYVTVSNALVTLYGKCGSIEDAHRLFDEMSFH-DQVSWTALV 451
>gi|115456187|ref|NP_001051694.1| Os03g0816600 [Oryza sativa Japonica Group]
gi|113550165|dbj|BAF13608.1| Os03g0816600, partial [Oryza sativa Japonica Group]
Length = 708
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 228/596 (38%), Positives = 351/596 (58%), Gaps = 44/596 (7%)
Query: 15 GYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNM 74
Y + G +T A LF ++P +NV+SW ++ GG+I++ + AR+LFD MPE++V M
Sbjct: 147 AYADLGDLTAARELFERIPRRNVMSWNILFGGYIKNGDLGGARKLFDEMPERNVATWNAM 206
Query: 75 VLGYCQDGRVDEGREIF----------DEMPKKNVISWTTMISGYVNNNRIDVARKLFEV 124
V G G +E F DE +V + V ++ +
Sbjct: 207 VAGLTNLGFDEESLGFFLDMRREGMHPDEFGLGSVFRCCAGLRDVVTGRQVHA--YVVRS 264
Query: 125 MPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVF 184
+++ +++ Y +CG +Q+ + + +P S+V+ N++I G QNG+ + A
Sbjct: 265 GLDRDMCVGSSLAHMYMRCGCLQEGEAVLRMLPSLSIVSCNTIIAGRTQNGDSEGA---- 320
Query: 185 DQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLD 244
++ F +M+ GV + + +S +S C+ LA+L
Sbjct: 321 ---------------------------LEYFCMMRSVGVAADVVTFVSAISSCSDLAALA 353
Query: 245 HGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYA 304
G+Q+H Q+++ D V V + L+ MY +CG L + +F + D + +++IS Y
Sbjct: 354 QGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTFLLSAMISAYG 413
Query: 305 QYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKT 364
+G G+K++++F +M + G P DVT + +L ACS++G +EG + FE M Y ++P
Sbjct: 414 FHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDCFELMTKTYGMQPSV 473
Query: 365 EHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQ 424
+HY C+VDLLGR+G +++A LI +MP PD +IW +LL AC+T D+AE AK++++
Sbjct: 474 KHYTCVVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLSACKTQKNFDMAERIAKRVIE 533
Query: 425 LEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDC 484
L+P ++ Y+LLSNI A+ R+ DV+E+RK MR NV K PG SW+E++ +H F D
Sbjct: 534 LDPHDSASYVLLSNIRATSRRWGDVSEVRKAMRDNNVRKEPGVSWVELKGHIHQFCTGD- 592
Query: 485 VSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVK 544
SHP I LE++ +R+ GY PD S VLHD+++EEK SL +HSEKLA+A+ +
Sbjct: 593 ESHPRQKEIDECLEEMMAKIRQCGYSPDMSMVLHDMEDEEKEVSLSHHSEKLAIAFAFLS 652
Query: 545 LPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
LPEGVPIRVMKNLRVC DCH AIKL+S+V GREI++RD +RFHHFKDG CSCRDYW
Sbjct: 653 LPEGVPIRVMKNLRVCDDCHLAIKLMSQVTGREIVVRDVSRFHHFKDGRCSCRDYW 708
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 86/253 (33%), Positives = 140/253 (55%), Gaps = 3/253 (1%)
Query: 136 MLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATW 195
+++ Y G + A ELF+ +P ++V++ N + G +NG++ AR +FD+M E++ ATW
Sbjct: 144 LMLAYADLGDLTAARELFERIPRRNVMSWNILFGGYIKNGDLGGARKLFDEMPERNVATW 203
Query: 196 SGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVR 255
+ M+ G++ E + F M++EG+ + L SV CA L + GRQVHA +VR
Sbjct: 204 NAMVAGLTNLGFDEESLGFFLDMRREGMHPDEFGLGSVFRCCAGLRDVVTGRQVHAYVVR 263
Query: 256 CQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKV 315
D D+ V S L MY++CG L +G+ + S IV N+II+G Q G E +L+
Sbjct: 264 SGLDRDMCVGSSLAHMYMRCGCLQEGEAVLRMLPSLSIVSCNTIIAGRTQNGDSEGALEY 323
Query: 316 FHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIF-ESMKSKYLVEPKTEHYACMVDLL 374
F M S GV D VT V +S+CS + +G++I + MK+ V+ C+V +
Sbjct: 324 FCMMRSVGVAADVVTFVSAISSCSDLAALAQGQQIHGQVMKAG--VDKVVPVMTCLVHMY 381
Query: 375 GRAGQVEDAMKLI 387
R G + D+ ++
Sbjct: 382 SRCGCLGDSERVF 394
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 114/302 (37%), Gaps = 82/302 (27%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
+P RNV+SW + GY++ G + A LF +MPE+NV +W M+ G +++ F
Sbjct: 164 IPRRNVMSWNILFGGYIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFF 223
Query: 61 -DMMPE-------------------KDVVA-------------QTNMVLG------YCQD 81
DM E +DVV +M +G Y +
Sbjct: 224 LDMRREGMHPDEFGLGSVFRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRC 283
Query: 82 GRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVM---------------- 125
G + EG + +P +++S T+I+G N + A + F +M
Sbjct: 284 GCLQEGEAVLRMLPSLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAI 343
Query: 126 ---------PEKNEVSWTAMLMG--------------YTQCGRIQDAWELFKAMPMKSVV 162
+ ++ M G Y++CG + D+ +F
Sbjct: 344 SSCSDLAALAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTF 403
Query: 163 ASNSMILGLGQNGEVQKARVVFDQM----REKDDATWSGMIKVYERKGYELEVIDLFTLM 218
++MI G +G QKA +F QM E D T+ ++ G + E +D F LM
Sbjct: 404 LLSAMISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDCFELM 463
Query: 219 QK 220
K
Sbjct: 464 TK 465
Score = 47.0 bits (110), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 40/194 (20%), Positives = 71/194 (36%), Gaps = 43/194 (22%)
Query: 233 VLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKD 292
+ C +L L RQ+HA D + A+ L+ Y G+L + +F+ ++
Sbjct: 112 LFRACRALRPL---RQLHAFAATSGAATDRFTANHLMLAYADLGDLTAARELFERIPRRN 168
Query: 293 IVMWNSIISGY-------------------------------AQYGLGEKSLKVFHEMFS 321
++ WN + GY G E+SL F +M
Sbjct: 169 VMSWNILFGGYIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLDMRR 228
Query: 322 SGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLG----RA 377
G+ PD+ L V C+ V GR++ Y+V + C+ L R
Sbjct: 229 EGMHPDEFGLGSVFRCCAGLRDVVTGRQVH-----AYVVRSGLDRDMCVGSSLAHMYMRC 283
Query: 378 GQVEDAMKLIEAMP 391
G +++ ++ +P
Sbjct: 284 GCLQEGEAVLRMLP 297
>gi|359497398|ref|XP_002270940.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 640
Score = 450 bits (1158), Expect = e-123, Method: Compositional matrix adjust.
Identities = 231/587 (39%), Positives = 353/587 (60%), Gaps = 14/587 (2%)
Query: 25 AGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVA----QTNMVLGYCQ 80
A ++F ++P + W M+ ++ ++ LF M ++ + ++V+ C
Sbjct: 57 ARSVFDEIPSPDTFIWNTMIRAYLNSQNPQESMSLFFQMRHQECIPIDSYSLSLVIQAC- 115
Query: 81 DGRVDE---GREIFDEMPK----KNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSW 133
GR+ + G+++ ++ K ++ T +I Y I++AR + + M + V +
Sbjct: 116 -GRLKDPGNGQKLHTQVLKIGLGSDLFVETALIEMYAKFGDIEIARNILDEMAHPDLVPY 174
Query: 134 TAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDA 193
+L Y + G I A +LF MP + +V+ N+MI G G+V A+ +FD+ E+D
Sbjct: 175 NVLLAEYVRVGEINLAHDLFDRMPERDLVSWNTMIHGHASLGDVGTAKKLFDRTCERDLI 234
Query: 194 TWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQL 253
+WS MI Y + E + LF MQ V + +++SVLS C + +L G+ +H +
Sbjct: 235 SWSSMIAAYAKARQSNEALRLFHEMQLANVLPDKVTMVSVLSACGDVGALGMGKMIHECI 294
Query: 254 VRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSL 313
R + ++D+ + + L+ MY KCG++ +F+ ++D+ W+++I G A +G GE +L
Sbjct: 295 ERNRIEIDLKLGTSLVDMYAKCGDIDNSLRVFNGMNNRDVFAWSAMIMGLANHGFGELAL 354
Query: 314 KVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDL 373
F +M S + P+DVT +GVLSACS+ G V EG F SM Y V PK EHY C+VD+
Sbjct: 355 DHFSKMISEDIKPNDVTFIGVLSACSHIGLVDEGWTYFTSMSKVYDVSPKIEHYGCVVDI 414
Query: 374 LGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPY 433
LGRAG++++AM+LI++MPF PDAI+W +LLGACR + +++AE A LL+LEP G Y
Sbjct: 415 LGRAGRLQEAMELIKSMPFAPDAIVWRALLGACRIYKNVEIAEEATVNLLELEPHVDGNY 474
Query: 434 ILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMI 493
+LLSNIY+ + V +R+ M+ N+ K PG S IEV+ VH F D SHPE I
Sbjct: 475 VLLSNIYSQAKEWDKVVNVRRMMKNINIQKVPGSSSIEVDNAVHEFVAGD-QSHPESKKI 533
Query: 494 MRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRV 553
+RML +I L+ GY P ++ VL D DE+EK ++L +HSEKLA+A+GL+ G IR+
Sbjct: 534 LRMLSEITARLKANGYAPLTASVLQDFDEKEKENALAHHSEKLAIAFGLLSTAPGSTIRI 593
Query: 554 MKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
+KNLRVC DCH AIKLIS+ R II+RD NRFHHF +G CSC+DYW
Sbjct: 594 VKNLRVCDDCHIAIKLISRTYKRRIIVRDRNRFHHFVNGSCSCKDYW 640
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 121/253 (47%), Gaps = 24/253 (9%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVV 69
TA++ Y + G I A + +M ++V + V+L ++R I+ A LFD MPE+D+V
Sbjct: 144 TALIEMYAKFGDIEIARNILDEMAHPDLVPYNVLLAEYVRVGEINLAHDLFDRMPERDLV 203
Query: 70 AQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLF------E 123
+ M+ G+ G V +++FD ++++ISW++MI+ Y + + A +LF
Sbjct: 204 SWNTMIHGHASLGDVGTAKKLFDRTCERDLISWSSMIAAYAKARQSNEALRLFHEMQLAN 263
Query: 124 VMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGL----------GQ 173
V+P+K M+ + CG D L + + N + + L +
Sbjct: 264 VLPDK-----VTMVSVLSACG---DVGALGMGKMIHECIERNRIEIDLKLGTSLVDMYAK 315
Query: 174 NGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISV 233
G++ + VF+ M +D WS MI G+ +D F+ M E ++ N + I V
Sbjct: 316 CGDIDNSLRVFNGMNNRDVFAWSAMIMGLANHGFGELALDHFSKMISEDIKPNDVTFIGV 375
Query: 234 LSVCASLASLDHG 246
LS C+ + +D G
Sbjct: 376 LSACSHIGLVDEG 388
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 117/233 (50%), Gaps = 14/233 (6%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
M ++V + ++ YV G I A LF +MPE+++VSW M+ G + A++LF
Sbjct: 166 MAHPDLVPYNVLLAEYVRVGEINLAHDLFDRMPERDLVSWNTMIHGHASLGDVGTAKKLF 225
Query: 61 DMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNV----ISWTTMISGYVNNNRID 116
D E+D+++ ++M+ Y + + +E +F EM NV ++ +++S + +
Sbjct: 226 DRTCERDLISWSSMIAAYAKARQSNEALRLFHEMQLANVLPDKVTMVSVLSACGDVGALG 285
Query: 117 VARKLFEVMPEKNEVS-----WTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGL 171
+ + + E + E+N + T+++ Y +CG I ++ +F M + V A ++MI+GL
Sbjct: 286 MGKMIHECI-ERNRIEIDLKLGTSLVDMYAKCGDIDNSLRVFNGMNNRDVFAWSAMIMGL 344
Query: 172 GQNGEVQKARVVFDQMREKD----DATWSGMIKVYERKGYELEVIDLFTLMQK 220
+G + A F +M +D D T+ G++ G E FT M K
Sbjct: 345 ANHGFGELALDHFSKMISEDIKPNDVTFIGVLSACSHIGLVDEGWTYFTSMSK 397
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 82/181 (45%), Gaps = 16/181 (8%)
Query: 233 VLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKC---GELVKGKLIFDNFA 289
V+S+ + L+ Q+HA +++ D + +V + L+ C +L+ + +FD
Sbjct: 6 VMSLLQNATKLNQIIQIHALIIKTSLDGNNFVLAKLLRRLFACSSANDLLYARSVFDEIP 65
Query: 290 SKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMP-DDVTLVGVLSACSYTGKVKEGR 348
S D +WN++I Y ++S+ +F +M +P D +L V+ AC G+
Sbjct: 66 SPDTFIWNTMIRAYLNSQNPQESMSLFFQMRHQECIPIDSYSLSLVIQACGRLKDPGNGQ 125
Query: 349 EIFES-----MKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
++ + S VE ++++ + G +E A +++ M PD + + LL
Sbjct: 126 KLHTQVLKIGLGSDLFVE------TALIEMYAKFGDIEIARNILDEMA-HPDLVPYNVLL 178
Query: 404 G 404
Sbjct: 179 A 179
>gi|108711755|gb|ABF99550.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|215697380|dbj|BAG91374.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 646
Score = 450 bits (1157), Expect = e-123, Method: Compositional matrix adjust.
Identities = 228/596 (38%), Positives = 351/596 (58%), Gaps = 44/596 (7%)
Query: 15 GYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNM 74
Y + G +T A LF ++P +NV+SW ++ GG+I++ + AR+LFD MPE++V M
Sbjct: 85 AYADLGDLTAARELFERIPRRNVMSWNILFGGYIKNGDLGGARKLFDEMPERNVATWNAM 144
Query: 75 VLGYCQDGRVDEGREIF----------DEMPKKNVISWTTMISGYVNNNRIDVARKLFEV 124
V G G +E F DE +V + V ++ +
Sbjct: 145 VAGLTNLGFDEESLGFFLDMRREGMHPDEFGLGSVFRCCAGLRDVVTGRQVHA--YVVRS 202
Query: 125 MPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVF 184
+++ +++ Y +CG +Q+ + + +P S+V+ N++I G QNG+ + A
Sbjct: 203 GLDRDMCVGSSLAHMYMRCGCLQEGEAVLRMLPSLSIVSCNTIIAGRTQNGDSEGA---- 258
Query: 185 DQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLD 244
++ F +M+ GV + + +S +S C+ LA+L
Sbjct: 259 ---------------------------LEYFCMMRSVGVAADVVTFVSAISSCSDLAALA 291
Query: 245 HGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYA 304
G+Q+H Q+++ D V V + L+ MY +CG L + +F + D + +++IS Y
Sbjct: 292 QGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTFLLSAMISAYG 351
Query: 305 QYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKT 364
+G G+K++++F +M + G P DVT + +L ACS++G +EG + FE M Y ++P
Sbjct: 352 FHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDCFELMTKTYGMQPSV 411
Query: 365 EHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQ 424
+HY C+VDLLGR+G +++A LI +MP PD +IW +LL AC+T D+AE AK++++
Sbjct: 412 KHYTCVVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLSACKTQKNFDMAERIAKRVIE 471
Query: 425 LEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDC 484
L+P ++ Y+LLSNI A+ R+ DV+E+RK MR NV K PG SW+E++ +H F D
Sbjct: 472 LDPHDSASYVLLSNIRATSRRWGDVSEVRKAMRDNNVRKEPGVSWVELKGHIHQFCTGD- 530
Query: 485 VSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVK 544
SHP I LE++ +R+ GY PD S VLHD+++EEK SL +HSEKLA+A+ +
Sbjct: 531 ESHPRQKEIDECLEEMMAKIRQCGYSPDMSMVLHDMEDEEKEVSLSHHSEKLAIAFAFLS 590
Query: 545 LPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
LPEGVPIRVMKNLRVC DCH AIKL+S+V GREI++RD +RFHHFKDG CSCRDYW
Sbjct: 591 LPEGVPIRVMKNLRVCDDCHLAIKLMSQVTGREIVVRDVSRFHHFKDGRCSCRDYW 646
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 86/253 (33%), Positives = 140/253 (55%), Gaps = 3/253 (1%)
Query: 136 MLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATW 195
+++ Y G + A ELF+ +P ++V++ N + G +NG++ AR +FD+M E++ ATW
Sbjct: 82 LMLAYADLGDLTAARELFERIPRRNVMSWNILFGGYIKNGDLGGARKLFDEMPERNVATW 141
Query: 196 SGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVR 255
+ M+ G++ E + F M++EG+ + L SV CA L + GRQVHA +VR
Sbjct: 142 NAMVAGLTNLGFDEESLGFFLDMRREGMHPDEFGLGSVFRCCAGLRDVVTGRQVHAYVVR 201
Query: 256 CQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKV 315
D D+ V S L MY++CG L +G+ + S IV N+II+G Q G E +L+
Sbjct: 202 SGLDRDMCVGSSLAHMYMRCGCLQEGEAVLRMLPSLSIVSCNTIIAGRTQNGDSEGALEY 261
Query: 316 FHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIF-ESMKSKYLVEPKTEHYACMVDLL 374
F M S GV D VT V +S+CS + +G++I + MK+ V+ C+V +
Sbjct: 262 FCMMRSVGVAADVVTFVSAISSCSDLAALAQGQQIHGQVMKAG--VDKVVPVMTCLVHMY 319
Query: 375 GRAGQVEDAMKLI 387
R G + D+ ++
Sbjct: 320 SRCGCLGDSERVF 332
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 114/302 (37%), Gaps = 82/302 (27%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
+P RNV+SW + GY++ G + A LF +MPE+NV +W M+ G +++ F
Sbjct: 102 IPRRNVMSWNILFGGYIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFF 161
Query: 61 -DMMPE-------------------KDVVA-------------QTNMVLG------YCQD 81
DM E +DVV +M +G Y +
Sbjct: 162 LDMRREGMHPDEFGLGSVFRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRC 221
Query: 82 GRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVM---------------- 125
G + EG + +P +++S T+I+G N + A + F +M
Sbjct: 222 GCLQEGEAVLRMLPSLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAI 281
Query: 126 ---------PEKNEVSWTAMLMG--------------YTQCGRIQDAWELFKAMPMKSVV 162
+ ++ M G Y++CG + D+ +F
Sbjct: 282 SSCSDLAALAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTF 341
Query: 163 ASNSMILGLGQNGEVQKARVVFDQM----REKDDATWSGMIKVYERKGYELEVIDLFTLM 218
++MI G +G QKA +F QM E D T+ ++ G + E +D F LM
Sbjct: 342 LLSAMISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDCFELM 401
Query: 219 QK 220
K
Sbjct: 402 TK 403
Score = 46.2 bits (108), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 40/194 (20%), Positives = 71/194 (36%), Gaps = 43/194 (22%)
Query: 233 VLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKD 292
+ C +L L RQ+HA D + A+ L+ Y G+L + +F+ ++
Sbjct: 50 LFRACRALRPL---RQLHAFAATSGAATDRFTANHLMLAYADLGDLTAARELFERIPRRN 106
Query: 293 IVMWNSIISGY-------------------------------AQYGLGEKSLKVFHEMFS 321
++ WN + GY G E+SL F +M
Sbjct: 107 VMSWNILFGGYIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLDMRR 166
Query: 322 SGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLG----RA 377
G+ PD+ L V C+ V GR++ Y+V + C+ L R
Sbjct: 167 EGMHPDEFGLGSVFRCCAGLRDVVTGRQV-----HAYVVRSGLDRDMCVGSSLAHMYMRC 221
Query: 378 GQVEDAMKLIEAMP 391
G +++ ++ +P
Sbjct: 222 GCLQEGEAVLRMLP 235
>gi|242050732|ref|XP_002463110.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
gi|241926487|gb|EER99631.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
Length = 802
Score = 449 bits (1156), Expect = e-123, Method: Compositional matrix adjust.
Identities = 229/589 (38%), Positives = 340/589 (57%), Gaps = 44/589 (7%)
Query: 55 DARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNR 114
DAR++ D MP+KD + T MV+GY + G V R +F+E+ K + W MISGYV++
Sbjct: 215 DARKVLDEMPDKDALTWTTMVVGYVRRGDVGAARSVFEEVDVKFDVVWNAMISGYVHSGM 274
Query: 115 IDVARKLFEVM-------------------------------------------PEKNEV 131
+ A +LF M PE
Sbjct: 275 VVEAFELFRRMVLERVPLDEFTFTSVLSACANAGFFAHGKSVHGQITRLQPNFVPEAALP 334
Query: 132 SWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKD 191
A++ Y++CG I A +F M K VV+ N+++ G ++ + KA VF++M K+
Sbjct: 335 VNNALVTLYSKCGNIAVARRIFDNMKSKDVVSWNTILSGYVESSCLDKAVEVFEEMPYKN 394
Query: 192 DATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHA 251
+ +W M+ Y G+ + + LF M+ E V+ + +S C L SL HG+Q+H
Sbjct: 395 ELSWMVMVSGYVHGGFSEDALKLFNRMRAEDVKPCDYTYAGAISACGELGSLKHGKQLHG 454
Query: 252 QLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEK 311
LV+ F+ + LITMY +CG + + L+F + D V WN++IS Q+G G +
Sbjct: 455 HLVQLGFEGSNSAGNALITMYARCGAVKEANLMFLVMPNIDSVSWNAMISALGQHGHGRE 514
Query: 312 SLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMV 371
+L++F M + G+ PD ++ + VL+AC+++G V EG + FESMK + + P +HY ++
Sbjct: 515 ALELFDRMVAEGIYPDRISFLTVLTACNHSGLVDEGFQYFESMKRDFGIIPGEDHYTRLI 574
Query: 372 DLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAG 431
DLLGRAG++ +A LI+ MPFEP IW ++L CRT ++L AA +L ++ P++ G
Sbjct: 575 DLLGRAGRIGEARDLIKTMPFEPTPSIWEAILSGCRTSGDMELGAHAADQLFKMTPQHDG 634
Query: 432 PYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHP 491
YILLSN Y++ GR+ D A +RK MR R V K PGCSWIE KVH+F D HPE
Sbjct: 635 TYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEAGNKVHVFVVGD-TKHPEAH 693
Query: 492 MIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPI 551
+ + LE +G +R+ GY PD+ VLHD++ +K H L HSE+LAV +GL+KLP G +
Sbjct: 694 KVYKFLEMVGARMRKLGYVPDTKVVLHDMEPHQKEHILFAHSERLAVGFGLLKLPPGATV 753
Query: 552 RVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
V+KNLR+C DCH+ + +SK +GREI++RD RFHHFKDG CSC +YW
Sbjct: 754 TVLKNLRICDDCHAVMMFMSKAVGREIVVRDVRRFHHFKDGECSCGNYW 802
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 117/450 (26%), Positives = 201/450 (44%), Gaps = 57/450 (12%)
Query: 12 MVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPE--KDVV 69
++ Y G + A TLF P V+ T ++ + R+ A FD +P+ +D V
Sbjct: 65 LIHLYTLSGDLPAAATLFRADPCP--VAATSLVAAYAAAGRLPAAVSFFDAVPQARRDTV 122
Query: 70 AQTNMVLGYCQDGRVDEGREIFDEMPKKNVI-----SWTTMIS--GYVNNNRIDVARKLF 122
++ Y + +F + + S+T ++S G++ N + +L
Sbjct: 123 LHNAVISAYARASHAAPAVAVFRSLLASGSLRPDDYSFTALLSAAGHLPNISVRHCAQLQ 182
Query: 123 EVMPEKN-----EVSWTAMLMGYTQCGRIQ---DAWELFKAMPMKSVVASNSMILGLGQN 174
+ + VS A++ Y +C ++ DA ++ MP K + +M++G +
Sbjct: 183 CSVLKSGAGGVLSVS-NALVALYMKCEALEATRDARKVLDEMPDKDALTWTTMVVGYVRR 241
Query: 175 GEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVL 234
G+V AR VF+++ K D W+ MI Y G +E +LF M E V ++ + SVL
Sbjct: 242 GDVGAARSVFEEVDVKFDVVWNAMISGYVHSGMVVEAFELFRRMVLERVPLDEFTFTSVL 301
Query: 235 SVCASLASLDHGRQVHAQLVRCQFD----VDVYVASVLITMYIKCGELVKGKLIFDNFAS 290
S CA+ HG+ VH Q+ R Q + + V + L+T+Y KCG + + IFDN S
Sbjct: 302 SACANAGFFAHGKSVHGQITRLQPNFVPEAALPVNNALVTLYSKCGNIAVARRIFDNMKS 361
Query: 291 KDIVMWNSIISGYAQY-------------------------------GLGEKSLKVFHEM 319
KD+V WN+I+SGY + G E +LK+F+ M
Sbjct: 362 KDVVSWNTILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFSEDALKLFNRM 421
Query: 320 FSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQ 379
+ V P D T G +SAC G +K G+++ + + E ++ + R G
Sbjct: 422 RAEDVKPCDYTYAGAISACGELGSLKHGKQLHGHL-VQLGFEGSNSAGNALITMYARCGA 480
Query: 380 VEDAMKLIEAMPFEPDAIIWGSLLGACRTH 409
V++A + MP D++ W +++ A H
Sbjct: 481 VKEANLMFLVMP-NIDSVSWNAMISALGQH 509
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 100/407 (24%), Positives = 169/407 (41%), Gaps = 90/407 (22%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MP+++ ++WT MV GYV G + A ++F ++ K V W M+ G++ + +A LF
Sbjct: 223 MPDKDALTWTTMVVGYVRRGDVGAARSVFEEVDVKFDVVWNAMISGYVHSGMVVEAFELF 282
Query: 61 -------------------------------------------DMMPEKDVVAQTNMVLG 77
+ +PE + +V
Sbjct: 283 RRMVLERVPLDEFTFTSVLSACANAGFFAHGKSVHGQITRLQPNFVPEAALPVNNALVTL 342
Query: 78 YCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAML 137
Y + G + R IFD M K+V+SW T++SGYV ++ +D A ++FE MP KNE+SW M+
Sbjct: 343 YSKCGNIAVARRIFDNMKSKDVVSWNTILSGYVESSCLDKAVEVFEEMPYKNELSWMVMV 402
Query: 138 MGYTQCGRIQDAWELFKAMPMKSV------------------------------------ 161
GY G +DA +LF M + V
Sbjct: 403 SGYVHGGFSEDALKLFNRMRAEDVKPCDYTYAGAISACGELGSLKHGKQLHGHLVQLGFE 462
Query: 162 ---VASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLM 218
A N++I + G V++A ++F M D +W+ MI + G+ E ++LF M
Sbjct: 463 GSNSAGNALITMYARCGAVKEANLMFLVMPNIDSVSWNAMISALGQHGHGREALELFDRM 522
Query: 219 QKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDV----DVYVASVLITMYIK 274
EG+ + S ++VL+ C +D G Q + R F + D Y + LI + +
Sbjct: 523 VAEGIYPDRISFLTVLTACNHSGLVDEGFQYFESMKR-DFGIIPGEDHY--TRLIDLLGR 579
Query: 275 CGELVKGKLIFDNFASKDI-VMWNSIISGYAQYGLGEKSLKVFHEMF 320
G + + + + + +W +I+SG G E ++F
Sbjct: 580 AGRIGEARDLIKTMPFEPTPSIWEAILSGCRTSGDMELGAHAADQLF 626
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 124/273 (45%), Gaps = 22/273 (8%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
M ++VVSW ++ GYVE + +A +F +MP KN +SW VM+ G++ +DA +LF
Sbjct: 359 MKSKDVVSWNTILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFSEDALKLF 418
Query: 61 DMMPEKDV----VAQTNMVLGYCQDGRVDEGREIFDEMPKKNV----ISWTTMISGYVNN 112
+ M +DV + + G + G+++ + + + +I+ Y
Sbjct: 419 NRMRAEDVKPCDYTYAGAISACGELGSLKHGKQLHGHLVQLGFEGSNSAGNALITMYARC 478
Query: 113 NRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSV----VASNSMI 168
+ A +F VMP + VSW AM+ Q G ++A ELF M + + ++ +++
Sbjct: 479 GAVKEANLMFLVMPNIDSVSWNAMISALGQHGHGREALELFDRMVAEGIYPDRISFLTVL 538
Query: 169 LGLGQNGEVQKARVVFDQMRE-----KDDATWSGMIKVYERKGYELEVIDLFTLMQKEGV 223
+G V + F+ M+ + ++ +I + R G E DL M E
Sbjct: 539 TACNHSGLVDEGFQYFESMKRDFGIIPGEDHYTRLIDLLGRAGRIGEARDLIKTMPFEPT 598
Query: 224 RVNFPSLI-SVLSVCASLASLDHGRQVHAQLVR 255
PS+ ++LS C + ++ G QL +
Sbjct: 599 ----PSIWEAILSGCRTSGDMELGAHAADQLFK 627
>gi|359483532|ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 824
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 235/617 (38%), Positives = 369/617 (59%), Gaps = 20/617 (3%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM----PEKNVVSWTVMLGGFIRDSRIDDA 56
+ +R+V+SW +M+ GYV G+ + LF QM ++ + ++ G +
Sbjct: 211 LGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVAGCSNTGMLLLG 270
Query: 57 RRLFDMMPE----KDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
R L + K++ ++ Y + G ++ ++F+ M +++V+SWT+MI+GY
Sbjct: 271 RALHGYAIKASFGKELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYARE 330
Query: 113 NRIDVARKLFEVMPEKNEVS-----WTAMLMGYTQCGRIQ---DAWELFKAMPMKS-VVA 163
D++ +LF M EK +S T +L G ++ D K M+S +
Sbjct: 331 GLSDMSVRLFHEM-EKEGISPDIFTITTILHACACTGLLENGKDVHNYIKENKMQSDLFV 389
Query: 164 SNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGV 223
SN+++ + G + A VF +M+ KD +W+ MI Y + E ++LF MQ
Sbjct: 390 SNALMDMYAKCGSMGDAHSVFSEMQVKDIVSWNTMIGGYSKNSLPNEALNLFVEMQYNS- 448
Query: 224 RVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKL 283
+ N ++ +L CASLA+L+ G+++H ++R F +D +VA+ L+ MY+KCG L +L
Sbjct: 449 KPNSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARL 508
Query: 284 IFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGK 343
+FD KD+V W +I+GY +G G +++ F+EM +SG+ PD+V+ + +L ACS++G
Sbjct: 509 LFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGL 568
Query: 344 VKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
+ EG F M++ +EPK+EHYAC+VDLL RAG + A K I+ MP EPDA IWG+LL
Sbjct: 569 LDEGWGFFNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDATIWGALL 628
Query: 404 GACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIK 463
CR + + LAE A+ + +LEP+N G Y+LL+NIYA ++ +V +LR+ + +R + K
Sbjct: 629 CGCRIYHDVKLAEKVAEHVFELEPENTGYYVLLANIYAEAEKWEEVKKLRERIGRRGLRK 688
Query: 464 PPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEE 523
PGCSWIE++ KVH+F D SHP I +L+K ++E G+ P + L D+
Sbjct: 689 NPGCSWIEIKGKVHIFVTGDS-SHPLANKIELLLKKTRTRMKEEGHFPKMRYALIKADDT 747
Query: 524 EKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDA 583
EK +L HSEK+A+A+G++ LP G +RV KNLRVCGDCH K +SK++ R+IILRD+
Sbjct: 748 EKEMALCGHSEKIAMAFGILSLPPGKTVRVTKNLRVCGDCHEMAKFMSKMVKRDIILRDS 807
Query: 584 NRFHHFKDGLCSCRDYW 600
NRFHHFKDG CSCR +W
Sbjct: 808 NRFHHFKDGSCSCRGHW 824
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 94/375 (25%), Positives = 184/375 (49%), Gaps = 21/375 (5%)
Query: 37 VVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNM-VLGYCQDGR-VDEGREIFDEM 94
+ + + + F + A L + P+ D+ +T VL C D + + +GR I +
Sbjct: 68 ITDYNIEICRFCELGNLRRAMELINQSPKPDLELRTYCSVLQLCADLKSIQDGRRIHSII 127
Query: 95 PKKNV----ISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAW 150
+V + + ++ YV + R++F+ + + W ++ GY + G +++
Sbjct: 128 QSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKVANEKVFLWNLLMNGYAKIGNFRESL 187
Query: 151 ELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELE 210
LFK M LG+ + V+ AR +FD++ ++D +W+ MI Y G +
Sbjct: 188 SLFKRMRE----------LGIRR---VESARKLFDELGDRDVISWNSMISGYVSNGLSEK 234
Query: 211 VIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLIT 270
+DLF M G+ + +++SV++ C++ L GR +H ++ F ++ + + L+
Sbjct: 235 GLDLFEQMLLLGINTDLATMVSVVAGCSNTGMLLLGRALHGYAIKASFGKELTLNNCLLD 294
Query: 271 MYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVT 330
MY K G L +F+ + +V W S+I+GYA+ GL + S+++FHEM G+ PD T
Sbjct: 295 MYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEGISPDIFT 354
Query: 331 LVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAM 390
+ +L AC+ TG ++ G+++ +K + A M D+ + G + DA + M
Sbjct: 355 ITTILHACACTGLLENGKDVHNYIKENKMQSDLFVSNALM-DMYAKCGSMGDAHSVFSEM 413
Query: 391 PFEPDAIIWGSLLGA 405
+ D + W +++G
Sbjct: 414 QVK-DIVSWNTMIGG 427
>gi|115463499|ref|NP_001055349.1| Os05g0370000 [Oryza sativa Japonica Group]
gi|54287484|gb|AAV31228.1| unknown protein [Oryza sativa Japonica Group]
gi|113578900|dbj|BAF17263.1| Os05g0370000 [Oryza sativa Japonica Group]
Length = 664
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 240/610 (39%), Positives = 342/610 (56%), Gaps = 54/610 (8%)
Query: 41 TVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMP----K 96
+ +L ++R DAR + D MP + VV + ++ + G + + + M +
Sbjct: 59 SSLLHAYLRFGATADARSVLDGMPHRTVVGWSALIAAHASHGDAEGAWGLLERMRSDGVE 118
Query: 97 KNVISWTTMISGYVNNNRI-DVARKLFEV-----MPEKNEVSW----------------- 133
NVI+W ++SG + R D L + +P+ VS
Sbjct: 119 PNVITWNGLVSGLNRSGRARDAVLALVRMHGEGFLPDATGVSCALSAVGDVGDVAVGEQL 178
Query: 134 ----------------TAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEV 177
TA++ Y +CGR + +F V + N+++ GL +N +V
Sbjct: 179 HGYVVKAGCRLDACVATALIDMYGKCGRADEIVRVFDESSHMDVASCNALVAGLSRNAQV 238
Query: 178 QKARVVFDQMR----EKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISV 233
+A +F + E + +W+ ++ + G +LE +DLF MQ EG+ N ++ V
Sbjct: 239 SEALRLFREFVGRGIELNVVSWTSIVACCVQNGRDLEAVDLFREMQSEGIEPNSVTIPCV 298
Query: 234 LSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDI 293
L A++A+L HGR H +R F D+YV S L+ MY KCG + ++IF+ +++
Sbjct: 299 LPAFANIAALMHGRSAHCFSLRKGFHHDIYVGSALVDMYAKCGRVRDARMIFEAMPYRNV 358
Query: 294 VMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFES 353
V WN++I GYA +G E ++++F M SS PD VT VL ACS G +EGR F
Sbjct: 359 VSWNAMIGGYAMHGEAENAVRLFRSMQSSKEKPDLVTFTCVLGACSQAGWTEEGRSYFNE 418
Query: 354 MKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLD 413
M+ K+ + P+ EHYACMV LLGRAG+++DA +I MPFEPD IWGSLLG+CR H +
Sbjct: 419 MQHKHGISPRMEHYACMVTLLGRAGKLDDAYDIINQMPFEPDGCIWGSLLGSCRVHGNVV 478
Query: 414 LAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVE 473
LAEVAA+ L QLEP+NAG Y+LLSNIYAS+ + V LR M+ + K GCSWIE++
Sbjct: 479 LAEVAAENLFQLEPENAGNYVLLSNIYASKKMWDGVNRLRDMMKTVGLKKEKGCSWIEIK 538
Query: 474 KKVHMFTGRDCVSHPEHPMIMRMLEKIGGL---LREAGYCPDSSFVLHDVDEEEKVHSLR 530
KVHM D HPM+ + EK+ L +R G+ P + +VLHDV+E+EK L
Sbjct: 539 NKVHMLLAGD----SSHPMMAAITEKLKHLTMEMRRLGFAPSTDYVLHDVEEQEKDDILS 594
Query: 531 YHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFK 590
HSEKLAVA GL+ G P++V+KNLR+CGDCH A+K IS REI +RD NRFHHFK
Sbjct: 595 VHSEKLAVALGLISTSHGTPLQVIKNLRICGDCHEAMKFISSFERREIYVRDTNRFHHFK 654
Query: 591 DGLCSCRDYW 600
DG CSC DYW
Sbjct: 655 DGKCSCADYW 664
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 99/215 (46%), Gaps = 18/215 (8%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMP----EKNVVSWTVMLGGFIRDSRIDDARR 58
E NVVSWT++V V+ G EA LF +M E N V+ +L F + + R
Sbjct: 254 ELNVVSWTSIVACCVQNGRDLEAVDLFREMQSEGIEPNSVTIPCVLPAFANIAALMHGRS 313
Query: 59 LFDMMPEK----DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNR 114
K D+ + +V Y + GRV + R IF+ MP +NV+SW MI GY +
Sbjct: 314 AHCFSLRKGFHHDIYVGSALVDMYAKCGRVRDARMIFEAMPYRNVVSWNAMIGGYAMHGE 373
Query: 115 IDVARKLFEVMPEKNE----VSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASN----- 165
+ A +LF M E V++T +L +Q G ++ F M K ++
Sbjct: 374 AENAVRLFRSMQSSKEKPDLVTFTCVLGACSQAGWTEEGRSYFNEMQHKHGISPRMEHYA 433
Query: 166 SMILGLGQNGEVQKARVVFDQMR-EKDDATWSGMI 199
M+ LG+ G++ A + +QM E D W ++
Sbjct: 434 CMVTLLGRAGKLDDAYDIINQMPFEPDGCIWGSLL 468
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/334 (21%), Positives = 123/334 (36%), Gaps = 86/334 (25%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMP----EKNVVSWTVMLGGFIRDSRIDDA 56
MP R VV W+A++ + G A L +M E NV++W ++ G R R DA
Sbjct: 81 MPHRTVVGWSALIAAHASHGDAEGAWGLLERMRSDGVEPNVITWNGLVSGLNRSGRARDA 140
Query: 57 RRLF------DMMPEK---------------------------------DVVAQTNMVLG 77
+P+ D T ++
Sbjct: 141 VLALVRMHGEGFLPDATGVSCALSAVGDVGDVAVGEQLHGYVVKAGCRLDACVATALIDM 200
Query: 78 YCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMP----EKNEVSW 133
Y + GR DE +FDE +V S +++G N ++ A +LF E N VSW
Sbjct: 201 YGKCGRADEIVRVFDESSHMDVASCNALVAGLSRNAQVSEALRLFREFVGRGIELNVVSW 260
Query: 134 TAMLMGYTQCGRIQDAWELFKAM----------------PMKSVVAS------------- 164
T+++ Q GR +A +LF+ M P + +A+
Sbjct: 261 TSIVACCVQNGRDLEAVDLFREMQSEGIEPNSVTIPCVLPAFANIAALMHGRSAHCFSLR 320
Query: 165 ----------NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDL 214
++++ + G V+ AR++F+ M ++ +W+ MI Y G + L
Sbjct: 321 KGFHHDIYVGSALVDMYAKCGRVRDARMIFEAMPYRNVVSWNAMIGGYAMHGEAENAVRL 380
Query: 215 FTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQ 248
F MQ + + + VL C+ + GR
Sbjct: 381 FRSMQSSKEKPDLVTFTCVLGACSQAGWTEEGRS 414
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 59/120 (49%), Gaps = 1/120 (0%)
Query: 261 DVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMF 320
D +VAS L+ Y++ G + + D + +V W+++I+ +A +G E + + M
Sbjct: 54 DAFVASSLLHAYLRFGATADARSVLDGMPHRTVVGWSALIAAHASHGDAEGAWGLLERMR 113
Query: 321 SSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQV 380
S GV P+ +T G++S + +G+ ++ M + + P +C + +G G V
Sbjct: 114 SDGVEPNVITWNGLVSGLNRSGRARDAVLALVRMHGEGFL-PDATGVSCALSAVGDVGDV 172
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 69/142 (48%), Gaps = 14/142 (9%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEK----NVVSWTVMLGGFIRDSRIDDA 56
MP RNVVSW AM+ GY G A LF M ++V++T +LG + ++
Sbjct: 353 MPYRNVVSWNAMIGGYAMHGEAENAVRLFRSMQSSKEKPDLVTFTCVLGACSQAGWTEEG 412
Query: 57 RRLFDMMPEKDVVAQ-----TNMVLGYCQDGRVDEGREIFDEMP-KKNVISWTTMI-SGY 109
R F+ M K ++ MV + G++D+ +I ++MP + + W +++ S
Sbjct: 413 RSYFNEMQHKHGISPRMEHYACMVTLLGRAGKLDDAYDIINQMPFEPDGCIWGSLLGSCR 472
Query: 110 VNNNRI---DVARKLFEVMPEK 128
V+ N + A LF++ PE
Sbjct: 473 VHGNVVLAEVAAENLFQLEPEN 494
>gi|255559617|ref|XP_002520828.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539959|gb|EEF41537.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 656
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 230/547 (42%), Positives = 341/547 (62%), Gaps = 37/547 (6%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
+PERNVV+ +AM+ GYV G + +A +F QM E+NV SWT ++ G+ + +D+A RLF
Sbjct: 108 IPERNVVADSAMISGYVRAGRLDKARQVFDQMVERNVFSWTSLVSGYFKIGNVDEAMRLF 167
Query: 61 DMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARK 120
+ MPEK+VV+ T V+GY Q+G +DE R+IF++MP+KN+I+WT M+ YV N+ ID A +
Sbjct: 168 NQMPEKNVVSWTTAVVGYAQNGFIDEARDIFNQMPEKNIIAWTAMVKSYVENDEIDEAFE 227
Query: 121 LFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKA 180
LF MP++N SW M+ G R+ +A +LF +MP ++ V+ +++ GL +NG ++ A
Sbjct: 228 LFYQMPQRNLYSWNIMISGCINANRLNEAIQLFNSMPQRNEVSWTTLVTGLARNGMMELA 287
Query: 181 RVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGV----------------- 223
R FD M KD A W+ MI Y +G E +LF LM ++ +
Sbjct: 288 RKYFDHMPTKDIAAWNAMITAYVDQGSMAEASNLFNLMPEKNIVSWNALIDGYARNGPES 347
Query: 224 ----------RVNF----PSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLI 269
R NF ++ SVL+ C S+ L Q H ++ F+ D +A+ L+
Sbjct: 348 NSLRYLILMLRSNFKPNETTITSVLTACDSILEL---MQAHGLVIHLGFEQDKVLANGLV 404
Query: 270 TMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDV 329
T Y +CG+++ + IFD KDIV W ++I Y+ +G G +L+VF M SG PD +
Sbjct: 405 TTYSRCGDVLSARFIFDQLEIKDIVSWTAMILAYSNHGCGPHALQVFARMLRSGAKPDGI 464
Query: 330 TLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEA 389
T VG+LSACS+ G VK+G+ +F+SM Y VEP+ EHY+C+VD+LGRAG++ AMK++
Sbjct: 465 TFVGLLSACSHAGLVKKGQMLFDSMSCAYGVEPRAEHYSCLVDILGRAGEMNKAMKVVSE 524
Query: 390 M-PFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHD 448
M P E D + G+LLGACR H + LA +KL++ EP ++G Y+LL+N YA+ G++++
Sbjct: 525 MPPHECDGAVLGALLGACRLHKDVGLANHIGEKLIEKEPTSSGSYVLLANAYAACGKWNE 584
Query: 449 VAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRML-EKIGGLLREA 507
AE+RK M++RNV K PG S IEV+ K H+F RD SHP+ I L EK+ L+RE
Sbjct: 585 FAEVRKEMKERNVKKEPGFSQIEVKGKSHVFFVRD-RSHPQLEEIYLFLDEKLLPLMREM 643
Query: 508 GYCPDSS 514
GY P+SS
Sbjct: 644 GYTPESS 650
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 123/399 (30%), Positives = 208/399 (52%), Gaps = 31/399 (7%)
Query: 20 GMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYC 79
G + EA +F +MP ++ VS+ M+ ++++ + A LF +PE++VVA + M+ GY
Sbjct: 65 GKVKEARKVFDEMPRRDAVSYASMITVYLKNKDLPQAEILFREIPERNVVADSAMISGYV 124
Query: 80 QDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMG 139
+ GR+D+ R++FD+M ++NV SWT+++SGY +D A +LF MPEKN VSWT ++G
Sbjct: 125 RAGRLDKARQVFDQMVERNVFSWTSLVSGYFKIGNVDEAMRLFNQMPEKNVVSWTTAVVG 184
Query: 140 YTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMI 199
Y Q G I +A ++F MP K+++A +M+ +N E+ +A +F QM +++ +W+ MI
Sbjct: 185 YAQNGFIDEARDIFNQMPEKNIIAWTAMVKSYVENDEIDEAFELFYQMPQRNLYSWNIMI 244
Query: 200 KVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFD 259
E I LF M + V++ +L++ L+ R +L R FD
Sbjct: 245 SGCINANRLNEAIQLFNSMPQRN-EVSWTTLVTGLA-----------RNGMMELARKYFD 292
Query: 260 ----VDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKV 315
D+ + +IT Y+ G + + +F+ K+IV WN++I GYA+ G SL+
Sbjct: 293 HMPTKDIAAWNAMITAYVDQGSMAEASNLFNLMPEKNIVSWNALIDGYARNGPESNSLRY 352
Query: 316 FHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLV-----EPKTEHYACM 370
M S P++ T+ VL+AC I E M++ LV E +
Sbjct: 353 LILMLRSNFKPNETTITSVLTACD---------SILELMQAHGLVIHLGFEQDKVLANGL 403
Query: 371 VDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTH 409
V R G V A + + + + D + W +++ A H
Sbjct: 404 VTTYSRCGDVLSARFIFDQLEIK-DIVSWTAMILAYSNH 441
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 141/300 (47%), Gaps = 23/300 (7%)
Query: 164 SNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGV 223
SN I LG G+V++AR VFD+M +D +++ MI VY + + LF + + V
Sbjct: 54 SNVKISNLGLRGKVKEARKVFDEMPRRDAVSYASMITVYLKNKDLPQAEILFREIPERNV 113
Query: 224 RVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKL 283
+ +++S LD RQV Q+V + +V+ + L++ Y K G + +
Sbjct: 114 VAD----SAMISGYVRAGRLDKARQVFDQMV----ERNVFSWTSLVSGYFKIGNVDEAMR 165
Query: 284 IFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGK 343
+F+ K++V W + + GYAQ G +++ +F++M + + ++ + +
Sbjct: 166 LFNQMPEKNVVSWTTAVVGYAQNGFIDEARDIFNQMPEKNI----IAWTAMVKSYVENDE 221
Query: 344 VKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
+ E E+F M + L + M+ A ++ +A++L +MP + + + W +L+
Sbjct: 222 IDEAFELFYQMPQRNLYS-----WNIMISGCINANRLNEAIQLFNSMP-QRNEVSWTTLV 275
Query: 404 -GACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVI 462
G R M E+A K + K+ + + Y QG + + L M ++N++
Sbjct: 276 TGLARNGM----MELARKYFDHMPTKDIAAWNAMITAYVDQGSMAEASNLFNLMPEKNIV 331
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 107/240 (44%), Gaps = 16/240 (6%)
Query: 225 VNFPSLI-SVLSVCASLASLD--HGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKG 281
+NFP+ S+ + S +SL + ++ ++ F D Y ++V I+ G++ +
Sbjct: 11 LNFPATFQSLRHLNRSFSSLKTPNPSKITTRIPFPVFASDTYESNVKISNLGLRGKVKEA 70
Query: 282 KLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYT 341
+ +FD +D V + S+I+ Y + ++ +F E+ V+ D + G + A
Sbjct: 71 RKVFDEMPRRDAVSYASMITVYLKNKDLPQAEILFREIPERNVVADSAMISGYVRA---- 126
Query: 342 GKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGS 401
G++ + R++F+ M VE + +V + G V++AM+L MP E + + W +
Sbjct: 127 GRLDKARQVFDQM-----VERNVFSWTSLVSGYFKIGNVDEAMRLFNQMP-EKNVVSWTT 180
Query: 402 LLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNV 461
A + + + A Q+ KN + + Y + EL M +RN+
Sbjct: 181 ---AVVGYAQNGFIDEARDIFNQMPEKNIIAWTAMVKSYVENDEIDEAFELFYQMPQRNL 237
>gi|168017714|ref|XP_001761392.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687398|gb|EDQ73781.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 833
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 256/715 (35%), Positives = 372/715 (52%), Gaps = 118/715 (16%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV-------------------VSW--- 40
+ VV+W A++ GY + G + EA LF QM ++ + ++W
Sbjct: 120 NKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEPSIITFLSVLDACSSPAGLNWGKE 179
Query: 41 ---TVMLGGFIRDSRI--------------DDARRLFDMMPEKDVVAQTNMVLGYCQDGR 83
V+ GF+ D RI DDAR++FD + +DV MV GY + G
Sbjct: 180 VHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVFDGLHIRDVSTFNVMVGGYAKSGD 239
Query: 84 VDEGREIFDEMP----KKNVISWTTMISG------------------------------- 108
++ E+F M K N IS+ +++ G
Sbjct: 240 WEKAFELFYRMQQVGLKPNKISFLSILDGCWTPEALAWGKAVHAQCMNAGLVDDIRVATS 299
Query: 109 ----YVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSV--- 161
Y I+ AR++F+ M ++ VSWT M+ GY + G I+DA+ LF M + +
Sbjct: 300 LIRMYTTCGSIEGARRVFDNMKVRDVVSWTVMIEGYAENGNIEDAFGLFATMQEEGIQPD 359
Query: 162 ----------------------VASNSMILGLGQN--------------GEVQKARVVFD 185
+ S I G G + G ++ AR VFD
Sbjct: 360 RITYMHIMNACAISANLNHAREIHSQVDIAGFGTDLLVSTALVHMYAKCGAIKDARQVFD 419
Query: 186 QMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDH 245
M +D +WS MI Y GY E + F LM++ + + + I++L+ C L +LD
Sbjct: 420 AMPRRDVVSWSAMIGAYVENGYGTEAFETFHLMKRSNIEPDGVTYINLLNACGHLGALDV 479
Query: 246 GRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQ 305
G +++ Q ++ V + + LI M K G + + + IFD +D++ WN++I GY+
Sbjct: 480 GMEIYTQAIKADLVSHVPLGNALIIMNAKHGSVERARYIFDTMVRRDVITWNAMIGGYSL 539
Query: 306 YGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTE 365
+G ++L +F M P+ VT VGVLSACS G V EGR F + + P +
Sbjct: 540 HGNAREALYLFDRMLKERFRPNSVTFVGVLSACSRAGFVDEGRRFFTYLLEGRGIVPTVK 599
Query: 366 HYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQL 425
Y CMVDLLGRAG++++A LI++MP +P + IW SLL ACR H LD+AE AA++ L +
Sbjct: 600 LYGCMVDLLGRAGELDEAELLIKSMPVKPTSSIWSSLLVACRIHGNLDVAERAAERCLMI 659
Query: 426 EPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCV 485
+P + Y+ LS++YA+ G + +VA++RK M R + K GC+WIEV KVH F D
Sbjct: 660 DPYDGAVYVQLSHMYAAAGMWENVAKVRKVMESRGIRKEQGCTWIEVAGKVHTFVVED-R 718
Query: 486 SHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKL 545
SHP I L ++ ++ GY P + VLHDV E++K ++ YHSEKLA+AYG++ L
Sbjct: 719 SHPLVGEIYAELARLMNAIKREGYIPITQNVLHDVGEQQKEEAISYHSEKLAIAYGVLSL 778
Query: 546 PEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
P G PIR+ KNLRVC DCHSA K ISKV GREII RDA+RFHHFKDG+CSC DYW
Sbjct: 779 PSGTPIRIYKNLRVCSDCHSASKFISKVTGREIIARDASRFHHFKDGVCSCGDYW 833
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 119/455 (26%), Positives = 217/455 (47%), Gaps = 55/455 (12%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMP 64
N+ +++ Y G +TEA +F + K VV+W ++ G+ + + +A LF M
Sbjct: 91 NIYELNTLIKLYSICGNVTEARQIFDSVENKTVVTWNALIAGYAQVGHVKEAFALFRQMV 150
Query: 65 E--------------------------KDVVAQ-------------TNMVLGYCQDGRVD 85
+ K+V AQ T +V Y + G +D
Sbjct: 151 DEGLEPSIITFLSVLDACSSPAGLNWGKEVHAQVVTAGFVSDFRIGTALVSMYVKGGSMD 210
Query: 86 EGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPE----KNEVSWTAMLMGYT 141
+ R++FD + ++V ++ M+ GY + + A +LF M + N++S+ ++L G
Sbjct: 211 DARQVFDGLHIRDVSTFNVMVGGYAKSGDWEKAFELFYRMQQVGLKPNKISFLSILDG-- 268
Query: 142 QCGRIQD-AW------ELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDAT 194
C + AW + A + + + S+I G ++ AR VFD M+ +D +
Sbjct: 269 -CWTPEALAWGKAVHAQCMNAGLVDDIRVATSLIRMYTTCGSIEGARRVFDNMKVRDVVS 327
Query: 195 WSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLV 254
W+ MI+ Y G + LF MQ+EG++ + + + +++ CA A+L+H R++H+Q+
Sbjct: 328 WTVMIEGYAENGNIEDAFGLFATMQEEGIQPDRITYMHIMNACAISANLNHAREIHSQVD 387
Query: 255 RCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLK 314
F D+ V++ L+ MY KCG + + +FD +D+V W+++I Y + G G ++ +
Sbjct: 388 IAGFGTDLLVSTALVHMYAKCGAIKDARQVFDAMPRRDVVSWSAMIGAYVENGYGTEAFE 447
Query: 315 VFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLL 374
FH M S + PD VT + +L+AC + G + G EI+ LV A ++ +
Sbjct: 448 TFHLMKRSNIEPDGVTYINLLNACGHLGALDVGMEIYTQAIKADLVSHVPLGNALII-MN 506
Query: 375 GRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTH 409
+ G VE A + + M D I W +++G H
Sbjct: 507 AKHGSVERARYIFDTM-VRRDVITWNAMIGGYSLH 540
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 98/367 (26%), Positives = 174/367 (47%), Gaps = 55/367 (14%)
Query: 87 GREIFDEMPKK----NVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQ 142
G+++ D + + N+ T+I Y + AR++F+ + K V+W A++ GY Q
Sbjct: 76 GKQVRDHIIQGGRQLNIYELNTLIKLYSICGNVTEARQIFDSVENKTVVTWNALIAGYAQ 135
Query: 143 CGRIQDAWELFKAM----------PMKSVVASNSMILGLG-------------------- 172
G +++A+ LF+ M SV+ + S GL
Sbjct: 136 VGHVKEAFALFRQMVDEGLEPSIITFLSVLDACSSPAGLNWGKEVHAQVVTAGFVSDFRI 195
Query: 173 ---------QNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGV 223
+ G + AR VFD + +D +T++ M+ Y + G + +LF MQ+ G+
Sbjct: 196 GTALVSMYVKGGSMDDARQVFDGLHIRDVSTFNVMVGGYAKSGDWEKAFELFYRMQQVGL 255
Query: 224 RVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKL 283
+ N S +S+L C + +L G+ VHAQ + D+ VA+ LI MY CG + +
Sbjct: 256 KPNKISFLSILDGCWTPEALAWGKAVHAQCMNAGLVDDIRVATSLIRMYTTCGSIEGARR 315
Query: 284 IFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGK 343
+FDN +D+V W +I GYA+ G E + +F M G+ PD +T + +++AC+ +
Sbjct: 316 VFDNMKVRDVVSWTVMIEGYAENGNIEDAFGLFATMQEEGIQPDRITYMHIMNACAISAN 375
Query: 344 VKEGREIFESMK-----SKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAII 398
+ REI + + LV +V + + G ++DA ++ +AMP D +
Sbjct: 376 LNHAREIHSQVDIAGFGTDLLVS------TALVHMYAKCGAIKDARQVFDAMP-RRDVVS 428
Query: 399 WGSLLGA 405
W +++GA
Sbjct: 429 WSAMIGA 435
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 90/318 (28%), Positives = 158/318 (49%), Gaps = 18/318 (5%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV----VSWTVMLGGFIRDSRIDDA 56
M R+VVSWT M+ GY E G I +A LF M E+ + +++ ++ + ++ A
Sbjct: 320 MKVRDVVSWTVMIEGYAENGNIEDAFGLFATMQEEGIQPDRITYMHIMNACAISANLNHA 379
Query: 57 RRLFDMMP----EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
R + + D++ T +V Y + G + + R++FD MP+++V+SW+ MI YV N
Sbjct: 380 REIHSQVDIAGFGTDLLVSTALVHMYAKCGAIKDARQVFDAMPRRDVVSWSAMIGAYVEN 439
Query: 113 NRIDVARKLFEVMPEKN----EVSWTAMLMGYTQCGRIQDAWELF----KAMPMKSVVAS 164
A + F +M N V++ +L G + E++ KA + V
Sbjct: 440 GYGTEAFETFHLMKRSNIEPDGVTYINLLNACGHLGALDVGMEIYTQAIKADLVSHVPLG 499
Query: 165 NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVR 224
N++I+ ++G V++AR +FD M +D TW+ MI Y G E + LF M KE R
Sbjct: 500 NALIIMNAKHGSVERARYIFDTMVRRDVITWNAMIGGYSLHGNAREALYLFDRMLKERFR 559
Query: 225 VNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDV-DVYVASVLITMYIKCGELVKGKL 283
N + + VLS C+ +D GR+ L+ + V V + ++ + + GEL + +L
Sbjct: 560 PNSVTFVGVLSACSRAGFVDEGRRFFTYLLEGRGIVPTVKLYGCMVDLLGRAGELDEAEL 619
Query: 284 IFDNFASKDI-VMWNSII 300
+ + K +W+S++
Sbjct: 620 LIKSMPVKPTSSIWSSLL 637
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 92/178 (51%), Gaps = 1/178 (0%)
Query: 213 DLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMY 272
D+ + + G ++ + + + C L G+QV +++ +++Y + LI +Y
Sbjct: 43 DVLQRLGEGGNHIDSRTYVKLFQRCTELRDAALGKQVRDHIIQGGRQLNIYELNTLIKLY 102
Query: 273 IKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLV 332
CG + + + IFD+ +K +V WN++I+GYAQ G +++ +F +M G+ P +T +
Sbjct: 103 SICGNVTEARQIFDSVENKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEPSIITFL 162
Query: 333 GVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAM 390
VL ACS + G+E+ + + V A +V + + G ++DA ++ + +
Sbjct: 163 SVLDACSSPAGLNWGKEVHAQVVTAGFVSDFRIGTA-LVSMYVKGGSMDDARQVFDGL 219
>gi|296084942|emb|CBI28351.3| unnamed protein product [Vitis vinifera]
Length = 770
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 247/641 (38%), Positives = 375/641 (58%), Gaps = 51/641 (7%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVV 69
T++V Y++ + + +F +M KNVVSWT +L G+ ++ + A +LF M + +
Sbjct: 131 TSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAGYRQNGLNEQALKLFSQMQLEGIK 190
Query: 70 AQ----TNMVLGYCQDGRVDEGREIFDEMPKKNVISW----TTMISGYVNNNRIDVARKL 121
++ G DG V++G ++ + K + S +M++ Y + + A+ +
Sbjct: 191 PNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVSDAKAV 250
Query: 122 FEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSM---ILGLGQN-GEV 177
F+ M +N VSW +M+ G+ G +A+ELF M ++ V + ++ ++ L N E+
Sbjct: 251 FDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKLTQTIFATVIKLCANIKEM 310
Query: 178 QKAR----------------------VVFDQMREKDDA--------------TWSGMIKV 201
A+ V + + E DDA +W+ +I
Sbjct: 311 SFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLFCMMHGVQNVVSWTAIISG 370
Query: 202 YERKGYELEVIDLFTLMQKE-GVRVNFPSLISVLSVCAS-LASLDHGRQVHAQLVRCQFD 259
Y + G ++LF M++E GV N + SVL+ CA+ AS++ G+Q H+ ++ F
Sbjct: 371 YVQNGRTDRAMNLFCQMRREEGVEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIKSGFS 430
Query: 260 VDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEM 319
+ V+S L+TMY K G + +F +D+V WNS+ISGYAQ+G G+KSLK+F EM
Sbjct: 431 NALCVSSALVTMYAKRGNIESANEVFKRQVDRDLVSWNSMISGYAQHGCGKKSLKIFEEM 490
Query: 320 FSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQ 379
S + D +T +GV+SAC++ G V EG+ F+ M Y + P EHY+CMVDL RAG
Sbjct: 491 RSKNLELDGITFIGVISACTHAGLVNEGQRYFDLMVKDYHIVPTMEHYSCMVDLYSRAGM 550
Query: 380 VEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNI 439
+E AM LI MPF A IW +LL ACR H+ + L E+AA+KL+ L+P+++ Y+LLSNI
Sbjct: 551 LEKAMDLINKMPFPAGATIWRTLLAACRVHLNVQLGELAAEKLISLQPQDSAAYVLLSNI 610
Query: 440 YASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEK 499
YA+ G + + A++RK M + V K G SWIEV+ K F D +SHP+ I LE+
Sbjct: 611 YATAGNWQERAKVRKLMDMKKVKKEAGYSWIEVKNKTFSFMAGD-LSHPQSDRIYLKLEE 669
Query: 500 IGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRV 559
+ L++AGY PD+ +VLHDV+EE K L HSE+LA+A+GL+ P G PI+++KNLRV
Sbjct: 670 LSIRLKDAGYYPDTKYVLHDVEEEHKEVILSQHSERLAIAFGLIATPPGTPIQIVKNLRV 729
Query: 560 CGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
CGDCH+ IKLISK+ GR+I++RD+NRFHHFK G CSC DYW
Sbjct: 730 CGDCHTVIKLISKIEGRDIVVRDSNRFHHFKGGSCSCGDYW 770
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 102/356 (28%), Positives = 185/356 (51%), Gaps = 15/356 (4%)
Query: 66 KDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVM 125
+DV T++V Y + V++G +FDEM KNV+SWT++++GY N + A KLF M
Sbjct: 125 EDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAGYRQNGLNEQALKLFSQM 184
Query: 126 P----EKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKS-----VVASNSMILGLGQNGE 176
+ N ++ A+L G G ++ ++ M +KS + NSM+ ++
Sbjct: 185 QLEGIKPNPFTFAAVLGGLAADGAVEKGVQV-HTMVIKSGLDSTIFVGNSMVNMYSKSLM 243
Query: 177 VQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSV 236
V A+ VFD M ++ +W+ MI + G +LE +LF M+ EGV++ +V+ +
Sbjct: 244 VSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKLTQTIFATVIKL 303
Query: 237 CASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKG-KLIFDNFASKDIVM 295
CA++ + +Q+H Q+++ D D+ + + L+ Y KC E+ KL +++V
Sbjct: 304 CANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLFCMMHGVQNVVS 363
Query: 296 WNSIISGYAQYGLGEKSLKVFHEM-FSSGVMPDDVTLVGVLSACSY-TGKVKEGREIFES 353
W +IISGY Q G ++++ +F +M GV P++ T VL+AC+ T V++G++ F S
Sbjct: 364 WTAIISGYVQNGRTDRAMNLFCQMRREEGVEPNEFTFSSVLNACAAPTASVEQGKQ-FHS 422
Query: 354 MKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTH 409
K + +V + + G +E A ++ + + D + W S++ H
Sbjct: 423 CSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQ-VDRDLVSWNSMISGYAQH 477
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 145/292 (49%), Gaps = 14/292 (4%)
Query: 180 ARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCAS 239
++ +FD+ ++ + + ++ + R E ++LF +++ G + SL VL VC
Sbjct: 45 SQQLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGC 104
Query: 240 LASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSI 299
L G+QVH Q ++C F DV V + L+ MY+K + G+ +FD K++V W S+
Sbjct: 105 LFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSL 164
Query: 300 ISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYL 359
++GY Q GL E++LK+F +M G+ P+ T VL + G V++G ++ +M K
Sbjct: 165 LAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQV-HTMVIKSG 223
Query: 360 VEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAA 419
++ MV++ ++ V DA + ++M +A+ W S++ T+ LDL
Sbjct: 224 LDSTIFVGNSMVNMYSKSLMVSDAKAVFDSME-NRNAVSWNSMIAGFVTN-GLDLEAFEL 281
Query: 420 KKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIE 471
++LE + +Q F V +L N+++ + K C I+
Sbjct: 282 FYRMRLE-----------GVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIK 322
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 75/339 (22%), Positives = 159/339 (46%), Gaps = 15/339 (4%)
Query: 88 REIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQ-CGRI 146
+++FDE P++ + ++ + N++ A LF + + + L + CG +
Sbjct: 46 QQLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGCL 105
Query: 147 QDA-------WELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMI 199
D + K ++ V S++ + V+ VFD+MR K+ +W+ ++
Sbjct: 106 FDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLL 165
Query: 200 KVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFD 259
Y + G + + LF+ MQ EG++ N + +VL A+ +++ G QVH +++ D
Sbjct: 166 AGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLD 225
Query: 260 VDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEM 319
++V + ++ MY K + K +FD+ +++ V WNS+I+G+ GL ++ ++F+ M
Sbjct: 226 STIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRM 285
Query: 320 FSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESM---KSKYLVEPKTEHYACMVDLLGR 376
GV V+ C+ ++ +++ + S + + KT A MV +
Sbjct: 286 RLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKT---ALMV-AYSK 341
Query: 377 AGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLA 415
+++DA KL M + + W +++ + + D A
Sbjct: 342 CSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRA 380
>gi|296083568|emb|CBI23560.3| unnamed protein product [Vitis vinifera]
Length = 497
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 209/491 (42%), Positives = 326/491 (66%), Gaps = 3/491 (0%)
Query: 112 NNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRI-QDAWELFKAMPMKSV-VASNSMIL 169
+ +D +RK+FE MPE N +SWTA++ Y Q G ++A ELF M SV NS+I
Sbjct: 8 DGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISASVNCVGNSLIS 67
Query: 170 GLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPS 229
++G ++ AR FD + EK+ +++ ++ Y + E LF + G+ ++ +
Sbjct: 68 MYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFT 127
Query: 230 LISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFA 289
S+LS AS+ ++ G Q+H +L++ + + + + LI+MY +CG + +F+
Sbjct: 128 FASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEME 187
Query: 290 SKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGRE 349
++++ W S+I+G+A++G ++L++FH+M +G P+++T V VLSACS+ G + EG++
Sbjct: 188 DRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQK 247
Query: 350 IFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTH 409
F SM ++ + P+ EHYACMVDLLGR+G + +AM+ I +MP DA++W +LLGACR H
Sbjct: 248 HFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVH 307
Query: 410 MKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSW 469
+L AA+ +L+ EP + YILLSN++AS G++ DV ++RK+M++RN+IK GCSW
Sbjct: 308 GNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSW 367
Query: 470 IEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSL 529
IEVE +VH F + SHP+ I + L+++ ++E GY PD+ FVLHD++EE+K L
Sbjct: 368 IEVENRVHRFHVGE-TSHPQAWQIYQELDQLASKIKEMGYIPDTDFVLHDIEEEQKEQFL 426
Query: 530 RYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHF 589
HSEK+AVA+GL+ + PIR+ KNLRVCGDCH+AIK IS GREI++RD+NRFHH
Sbjct: 427 FQHSEKIAVAFGLISTSQSKPIRIFKNLRVCGDCHTAIKYISMATGREIVVRDSNRFHHI 486
Query: 590 KDGLCSCRDYW 600
K+G+CSC DYW
Sbjct: 487 KNGVCSCNDYW 497
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 85/382 (22%), Positives = 180/382 (47%), Gaps = 45/382 (11%)
Query: 19 EGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRID-DARRLFDMMPEKDVVAQTNMVLG 77
+G + ++ +F QMPE NV+SWT ++ +++ D +A LF M V N ++
Sbjct: 8 DGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISASVNCVGNSLIS 67
Query: 78 -YCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEK----NEVS 132
Y + GR+++ R+ FD + +KN++S+ ++ GY N + + A LF + + + +
Sbjct: 68 MYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFT 127
Query: 133 WTAMLMGYTQCGRI----QDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMR 188
+ ++L G G + Q L K + N++I + G ++ A VF++M
Sbjct: 128 FASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEME 187
Query: 189 EKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQ 248
+++ +W+ MI + + G+ +++F M + G + N + ++VLS C+ + + G++
Sbjct: 188 DRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQK 247
Query: 249 VHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGL 308
F+ +MY + G + + +++A ++ + GL
Sbjct: 248 --------HFN----------SMYKEHGIVPR----MEHYA--------CMVDLLGRSGL 277
Query: 309 GEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYA 368
++++ + M +M D + +L AC G + GR E + + +P Y
Sbjct: 278 LVEAMEFINSM---PLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAA--YI 332
Query: 369 CMVDLLGRAGQVEDAMKLIEAM 390
+ +L AGQ +D +K+ ++M
Sbjct: 333 LLSNLHASAGQWKDVVKIRKSM 354
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 96/232 (41%), Gaps = 76/232 (32%)
Query: 1 MPERNVVSWTAMVRGYVEEGMI-TEAGTLFWQMP-------------------------- 33
MPE NV+SWTA++ YV+ G EA LF +M
Sbjct: 21 MPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISASVNCVGNSLISMYARSGRMEDARK 80
Query: 34 ------EKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDV------------------- 68
EKN+VS+ ++ G+ ++ + ++A LF+ + + +
Sbjct: 81 AFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGA 140
Query: 69 VAQTNMVLG--------------------YCQDGRVDEGREIFDEMPKKNVISWTTMISG 108
+ + + G Y + G ++ ++F+EM +NVISWT+MI+G
Sbjct: 141 MGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITG 200
Query: 109 YVNNNRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAM 156
+ + A ++F M E NE+++ A+L + G I + + F +M
Sbjct: 201 FAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSM 252
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 83/175 (47%), Gaps = 13/175 (7%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEK----NVVSWTVMLGGFIRDSRIDDA 56
M +RNV+SWT+M+ G+ + G T A +F +M E N +++ +L I +
Sbjct: 186 MEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEG 245
Query: 57 RRLFD-MMPEKDVVAQTN----MVLGYCQDGRVDEGREIFDEMP-KKNVISWTTMISGYV 110
++ F+ M E +V + MV + G + E E + MP + + W T++
Sbjct: 246 QKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACR 305
Query: 111 NNNRIDVARKLFEVMPEK---NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVV 162
+ ++ R E++ E+ + ++ + + G+ +D ++ K+M ++++
Sbjct: 306 VHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLI 360
>gi|297851096|ref|XP_002893429.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297339271|gb|EFH69688.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 790
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 223/589 (37%), Positives = 355/589 (60%), Gaps = 10/589 (1%)
Query: 21 MITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEK-DVVAQTNMVLGYC 79
++ A +F +PEK+ SWT M+ G++++ D + L M E +VA M+ GY
Sbjct: 203 LLHSARKVFDDIPEKDERSWTTMMTGYVKNGCFDLGKELLKGMDENMKLVAYNAMISGYV 262
Query: 80 QDGRVDEGREIFDEMPKKNV----ISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSW-- 133
G E E+ M + ++ ++I N + + +++ + + + S+
Sbjct: 263 NCGLYQEALEMVRRMVSSGIELDEFTYPSVIRACANARLLQLGKQVHAYVLRREDFSFHF 322
Query: 134 -TAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDD 192
+++ Y +CG+ +A +F+ MP K +V+ N+++ G +G + +A+++F +M+EK+
Sbjct: 323 DNSLVTLYYKCGKFNEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNI 382
Query: 193 ATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQ 252
+W MI G+ E + LF+ M++EG + + CA L + +G+Q HAQ
Sbjct: 383 LSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQFHAQ 442
Query: 253 LVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKS 312
LV+ FD + + LITMY KCG + + + +F D V WN++I+ Q+G G ++
Sbjct: 443 LVKIGFDSSLSAGNALITMYAKCGVVEEAQQVFRTMPCLDSVSWNALIAALGQHGHGVEA 502
Query: 313 LKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVD 372
+ V+ EM G+ PD +T + VL+ACS+ G V +GR+ F SM++ Y + P +HYA ++D
Sbjct: 503 VDVYEEMLKKGIRPDRITFLTVLTACSHAGLVDQGRKYFNSMETVYRIPPGADHYARLID 562
Query: 373 LLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGP 432
LL R+G+ +A +IE++PF+P A IW +LL CR H ++L +AA KL L P++ G
Sbjct: 563 LLCRSGKFSEAESIIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGT 622
Query: 433 YILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPM 492
Y+LLSN+YA+ G++ +VA +RK MR R V K CSWIE+E +VH F D SHPE
Sbjct: 623 YMLLSNMYAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDD-TSHPEAEA 681
Query: 493 IMRMLEKIGGLLREAGYCPDSSFVLHDVDEE-EKVHSLRYHSEKLAVAYGLVKLPEGVPI 551
+ + L+ +G +R GY PD+SFVLHDV+ + K L HSEK+AVA+GL+KLP G I
Sbjct: 682 VYKYLQDLGKEMRRLGYVPDTSFVLHDVESDGHKEDMLTTHSEKIAVAFGLMKLPPGTTI 741
Query: 552 RVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
R+ KNLR CGDCH+ + +SKV+ R+IILRD RFHHF++G CSC ++W
Sbjct: 742 RIFKNLRTCGDCHNFFRFLSKVVQRDIILRDRKRFHHFRNGECSCGNFW 790
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 110/441 (24%), Positives = 196/441 (44%), Gaps = 81/441 (18%)
Query: 47 FIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMP--KKNVISWTT 104
+ + S +D AR+LFD + E D +A+T MV GYC G + R +F+E P ++ + +
Sbjct: 59 YCKSSELDYARQLFDEISEPDKIARTTMVSGYCASGDIALARSVFEETPVSMRDTVMYNA 118
Query: 105 MISGYVNNNRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKS 160
MI+G+ +NN A LF M + ++ ++ ++L G + F A +KS
Sbjct: 119 MITGFSHNNDGYSAINLFCKMKHEGFKPDDFTYASVLAGLALVVDDEKQCVQFHAAALKS 178
Query: 161 -----VVASNSMILGLGQNGE----VQKARVVFDQMREKDDATWSGMIKVYERKG-YEL- 209
SN+++ + + AR VFD + EKD+ +W+ M+ Y + G ++L
Sbjct: 179 GAGYVTSVSNALVSVYSRCASSPSLLHSARKVFDDIPEKDERSWTTMMTGYVKNGCFDLG 238
Query: 210 ------------------------------EVIDLFTLMQKEGVRVNFPSLISVLSVCAS 239
E +++ M G+ ++ + SV+ CA+
Sbjct: 239 KELLKGMDENMKLVAYNAMISGYVNCGLYQEALEMVRRMVSSGIELDEFTYPSVIRACAN 298
Query: 240 LASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSI 299
L G+QVHA ++R + D + + L+T+Y KCG+ + + IF+ +KD+V WN++
Sbjct: 299 ARLLQLGKQVHAYVLRRE-DFSFHFDNSLVTLYYKCGKFNEARAIFEKMPAKDLVSWNAL 357
Query: 300 ISGY-------------------------------AQYGLGEKSLKVFHEMFSSGVMPDD 328
+SGY A+ G GE+ LK+F M G P D
Sbjct: 358 LSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCD 417
Query: 329 VTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIE 388
G + +C+ G G++ F + K + ++ + + G VE+A ++
Sbjct: 418 YAFSGAIKSCAVLGAYCNGQQ-FHAQLVKIGFDSSLSAGNALITMYAKCGVVEEAQQVFR 476
Query: 389 AMPFEPDAIIWGSLLGACRTH 409
MP D++ W +L+ A H
Sbjct: 477 TMPC-LDSVSWNALIAALGQH 496
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 100/440 (22%), Positives = 193/440 (43%), Gaps = 87/440 (19%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEK-NVVSWTVMLGGFIRDSRIDDA--- 56
+PE++ SWT M+ GYV+ G L M E +V++ M+ G++ +A
Sbjct: 214 IPEKDERSWTTMMTGYVKNGCFDLGKELLKGMDENMKLVAYNAMISGYVNCGLYQEALEM 273
Query: 57 -RRLFDMMPEKDVVA----------------------------------QTNMVLGYCQD 81
RR+ E D ++V Y +
Sbjct: 274 VRRMVSSGIELDEFTYPSVIRACANARLLQLGKQVHAYVLRREDFSFHFDNSLVTLYYKC 333
Query: 82 GRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYT 141
G+ +E R IF++MP K+++SW ++SGYV++ I A+ +F+ M EKN +SW M+ G
Sbjct: 334 GKFNEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLA 393
Query: 142 QCGRIQDAWELFKAMPMK---------------------------------------SVV 162
+ G ++ +LF M + S+
Sbjct: 394 ENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQFHAQLVKIGFDSSLS 453
Query: 163 ASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEG 222
A N++I + G V++A+ VF M D +W+ +I + G+ +E +D++ M K+G
Sbjct: 454 AGNALITMYAKCGVVEEAQQVFRTMPCLDSVSWNALIAALGQHGHGVEAVDVYEEMLKKG 513
Query: 223 VRVNFPSLISVLSVCASLASLDHGRQVHAQL---VRCQFDVDVYVASVLITMYIKCGELV 279
+R + + ++VL+ C+ +D GR+ + R D Y + LI + + G+
Sbjct: 514 IRPDRITFLTVLTACSHAGLVDQGRKYFNSMETVYRIPPGADHY--ARLIDLLCRSGKFS 571
Query: 280 KGKLIFDNFASKDIV-MWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPD-DVTLVGVLSA 337
+ + I ++ K +W +++SG +G E + ++F G++P+ D T + + +
Sbjct: 572 EAESIIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLF--GLIPEHDGTYMLLSNM 629
Query: 338 CSYTGKVKEGREIFESMKSK 357
+ TG+ +E + + M+ +
Sbjct: 630 YAATGQWEEVARVRKLMRDR 649
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 89/329 (27%), Positives = 160/329 (48%), Gaps = 29/329 (8%)
Query: 91 FDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAW 150
F P ++++ +I Y ++ +D AR+LF+ + E ++++ T M+ GY G I A
Sbjct: 43 FGFQPHAHILN--RLIDVYCKSSELDYARQLFDEISEPDKIARTTMVSGYCASGDIALAR 100
Query: 151 ELFKAMP--MKSVVASNSMILGLGQNGEVQKARVVFDQMREK----DDATW----SGMIK 200
+F+ P M+ V N+MI G N + A +F +M+ + DD T+ +G+
Sbjct: 101 SVFEETPVSMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDDFTYASVLAGLAL 160
Query: 201 VYERKGYELEVIDLFTLMQKEG---VRVNFPSLISVLSVCASLASLDH-GRQVHAQLVRC 256
V + E + + K G V +L+SV S CAS SL H R+V +
Sbjct: 161 VVDD---EKQCVQFHAAALKSGAGYVTSVSNALVSVYSRCASSPSLLHSARKVFDDIP-- 215
Query: 257 QFDVDVYVASVLITMYIKCGELVKGKLIFDNF-ASKDIVMWNSIISGYAQYGLGEKSLKV 315
+ D + ++T Y+K G GK + + +V +N++ISGY GL +++L++
Sbjct: 216 --EKDERSWTTMMTGYVKNGCFDLGKELLKGMDENMKLVAYNAMISGYVNCGLYQEALEM 273
Query: 316 FHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHY-ACMVDLL 374
M SSG+ D+ T V+ AC+ ++ G+++ + + E + H+ +V L
Sbjct: 274 VRRMVSSGIELDEFTYPSVIRACANARLLQLGKQVHAYVLRR---EDFSFHFDNSLVTLY 330
Query: 375 GRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
+ G+ +A + E MP D + W +LL
Sbjct: 331 YKCGKFNEARAIFEKMP-AKDLVSWNALL 358
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 55/139 (39%), Gaps = 35/139 (25%)
Query: 234 LSVCASL--ASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFAS- 290
L +C L SL R VH ++ F ++ + LI +Y K EL + +FD +
Sbjct: 19 LRLCLPLRRTSLQLARAVHGNIITFGFQPHAHILNRLIDVYCKSSELDYARQLFDEISEP 78
Query: 291 --------------------------------KDIVMWNSIISGYAQYGLGEKSLKVFHE 318
+D VM+N++I+G++ G ++ +F +
Sbjct: 79 DKIARTTMVSGYCASGDIALARSVFEETPVSMRDTVMYNAMITGFSHNNDGYSAINLFCK 138
Query: 319 MFSSGVMPDDVTLVGVLSA 337
M G PDD T VL+
Sbjct: 139 MKHEGFKPDDFTYASVLAG 157
>gi|297822703|ref|XP_002879234.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297325073|gb|EFH55493.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 740
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 232/593 (39%), Positives = 351/593 (59%), Gaps = 26/593 (4%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVV 69
+++ Y G + A +F + EK+VVSW M+ GF++ D A LF M +DV
Sbjct: 172 NSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVK 231
Query: 70 AQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKN 129
A ++G + K + + + Y+ NR++V L
Sbjct: 232 ASHVTMVG------------VLSACAKIRDLEFGRRVCSYIEENRVNVNLTLA------- 272
Query: 130 EVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMRE 189
AML YT+CG I+DA LF AM K V +M+ G + + + AR V + M +
Sbjct: 273 ----NAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNAMPK 328
Query: 190 KDDATWSGMIKVYERKGYELEVIDLFTLMQ-KEGVRVNFPSLISVLSVCASLASLDHGRQ 248
KD W+ +I YE+ G E + +F +Q ++ +++N +L+S LS CA + +L+ GR
Sbjct: 329 KDIVAWNALISAYEQNGKPNEALLVFHELQLQKNIKLNQITLVSTLSACAQVGALELGRW 388
Query: 249 VHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGL 308
+H+ + + ++ YV S LI MY KCG+L K + +F++ +D+ +W+++I G A +G
Sbjct: 389 IHSYIKKNGIKMNFYVTSALIHMYSKCGDLEKAREVFNSVEKRDVFVWSAMIGGLAMHGC 448
Query: 309 GEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYA 368
G +++ +F++M + V P+ VT V ACS+TG V E +F M+S Y + P+ +HYA
Sbjct: 449 GSEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFYKMESSYGIVPEDKHYA 508
Query: 369 CMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPK 428
C+VD+LGR+G +E A+K IEAMP P +WG+LLGAC+ H L LAE+A +LL+LEP+
Sbjct: 509 CIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLSLAEMACTRLLELEPR 568
Query: 429 NAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHP 488
N G ++LLSNIYA G++ +V+ELRK+MR + K PGCS IE++ +H F D +HP
Sbjct: 569 NDGAHVLLSNIYAKSGKWDNVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGD-NAHP 627
Query: 489 EHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEE-KVHSLRYHSEKLAVAYGLVKLPE 547
+ L ++ L+ GY P+ S VL ++EEE K SL HSEKLA+ YGL+
Sbjct: 628 MSEKVYGKLHEVMEKLKSNGYEPEMSHVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEA 687
Query: 548 GVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
IRV+KNLR+CGDCH+ KLIS++ REII+RD RFHHF++G CSC D+W
Sbjct: 688 PKAIRVIKNLRMCGDCHAVAKLISQLYNREIIVRDRYRFHHFRNGQCSCNDFW 740
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/375 (25%), Positives = 176/375 (46%), Gaps = 54/375 (14%)
Query: 82 GRVDEGREIFDEMPKKNVISWTTMISGYVNNNR--------IDVARKLFEVMPEKNEVSW 133
++ R++FDE+P+ N +W T+I Y + +D+ + P N+ ++
Sbjct: 79 ASLEYARKVFDEIPQPNSFTWNTLIRAYASGPDPVCSIWAFLDMVSSESQCYP--NKYTF 136
Query: 134 TAMLMGYTQCGRIQDAWELFKAMPMKSVVAS-----NSMILGLGQNGEVQKARVVFDQMR 188
++ + + L M +KS V S NS+I G++ A VF ++
Sbjct: 137 PFLIKAAAEVSSLSLGQSL-HGMAIKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIK 195
Query: 189 EKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQ 248
EKD +W+ MI + +KG + ++LF M+ E V+ + +++ VLS CA + L+ GR+
Sbjct: 196 EKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRDLEFGRR 255
Query: 249 VHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFD---------------------- 286
V + + + +V++ +A+ ++ MY KCG + K +FD
Sbjct: 256 VCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISED 315
Query: 287 ---------NFASKDIVMWNSIISGYAQYGLGEKSLKVFHEM-FSSGVMPDDVTLVGVLS 336
KDIV WN++IS Y Q G ++L VFHE+ + + +TLV LS
Sbjct: 316 YEAAREVLNAMPKKDIVAWNALISAYEQNGKPNEALLVFHELQLQKNIKLNQITLVSTLS 375
Query: 337 ACSYTGKVKEGREIFESMKSKYLVEPKTEHY--ACMVDLLGRAGQVEDAMKLIEAMPFEP 394
AC+ G ++ GR I +K + K Y + ++ + + G +E A ++ ++ +
Sbjct: 376 ACAQVGALELGRWIHSYIKKNGI---KMNFYVTSALIHMYSKCGDLEKAREVFNSVE-KR 431
Query: 395 DAIIWGSLLGACRTH 409
D +W +++G H
Sbjct: 432 DVFVWSAMIGGLAMH 446
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 90/303 (29%), Positives = 151/303 (49%), Gaps = 23/303 (7%)
Query: 168 ILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLM-----QKEG 222
I L ++ AR VFD++ + + TW+ +I+ Y + I F M Q
Sbjct: 72 IAALSSFASLEYARKVFDEIPQPNSFTWNTLIRAYASGPDPVCSIWAFLDMVSSESQCYP 131
Query: 223 VRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGK 282
+ FP LI A ++SL G+ +H ++ DV+VA+ LI Y CG+L
Sbjct: 132 NKYTFPFLI---KAAAEVSSLSLGQSLHGMAIKSAVGSDVFVANSLIHCYFSCGDLDSAC 188
Query: 283 LIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTG 342
+F KD+V WNS+I+G+ Q G +K+L++F +M S V VT+VGVLSAC+
Sbjct: 189 KVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIR 248
Query: 343 KVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSL 402
++ GR + ++ + T A M+D+ + G +EDA +L +AM E D + W ++
Sbjct: 249 DLEFGRRVCSYIEENRVNVNLTLANA-MLDMYTKCGSIEDAKRLFDAME-EKDNVTWTTM 306
Query: 403 LGACRTHMKLDLAEVAAKKLLQLEP-KNAGPYILLSNIYASQGR-------FHDVAELRK 454
L + AA+++L P K+ + L + Y G+ FH++ +L+K
Sbjct: 307 LDGYAISEDYE----AAREVLNAMPKKDIVAWNALISAYEQNGKPNEALLVFHEL-QLQK 361
Query: 455 NMR 457
N++
Sbjct: 362 NIK 364
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 138/297 (46%), Gaps = 52/297 (17%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV-VSWTVMLGGFIRDSRIDD---ARR 58
E++VVSW +M+ G+V++G +A LF +M ++V S M+G ++I D RR
Sbjct: 196 EKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRDLEFGRR 255
Query: 59 LFDMMPEKDVVAQTNMVLG------YCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+ + E V N+ L Y + G +++ + +FD M +K+ ++WTTM+ GY +
Sbjct: 256 VCSYIEENRV--NVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAIS 313
Query: 113 NRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMIL--- 169
+ AR++ MP+K+ V+W A++ Y Q G+ +A +F + ++ + N + L
Sbjct: 314 EDYEAAREVLNAMPKKDIVAWNALISAYEQNGKPNEALLVFHELQLQKNIKLNQITLVST 373
Query: 170 -----------------------GLGQN--------------GEVQKARVVFDQMREKDD 192
G+ N G+++KAR VF+ + ++D
Sbjct: 374 LSACAQVGALELGRWIHSYIKKNGIKMNFYVTSALIHMYSKCGDLEKAREVFNSVEKRDV 433
Query: 193 ATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQV 249
WS MI G E +D+F MQ+ V+ N + +V C+ +D +
Sbjct: 434 FVWSAMIGGLAMHGCGSEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESL 490
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 110/236 (46%), Gaps = 18/236 (7%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
M E++ V+WT M+ GY A + MP+K++V+W ++ + ++ + ++A +F
Sbjct: 295 MEEKDNVTWTTMLDGYAISEDYEAAREVLNAMPKKDIVAWNALISAYEQNGKPNEALLVF 354
Query: 61 -DMMPEKDV-VAQTNMV--LGYC-QDGRVDEGREIFDEMPKK----NVISWTTMISGYVN 111
++ +K++ + Q +V L C Q G ++ GR I + K N + +I Y
Sbjct: 355 HELQLQKNIKLNQITLVSTLSACAQVGALELGRWIHSYIKKNGIKMNFYVTSALIHMYSK 414
Query: 112 NNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSV----VASNSM 167
++ AR++F + +++ W+AM+ G G +A ++F M +V V ++
Sbjct: 415 CGDLEKAREVFNSVEKRDVFVWSAMIGGLAMHGCGSEAVDMFYKMQEANVKPNGVTFTNV 474
Query: 168 ILGLGQNGEVQKARVVFDQMREK-----DDATWSGMIKVYERKGYELEVIDLFTLM 218
G V +A +F +M +D ++ ++ V R GY + + M
Sbjct: 475 FCACSHTGLVDEAESLFYKMESSYGIVPEDKHYACIVDVLGRSGYLEKAVKFIEAM 530
Score = 45.4 bits (106), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 72/178 (40%), Gaps = 9/178 (5%)
Query: 231 ISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVL--ITMYIKCGELVKGKLIFDNF 288
IS++ C+SL L +Q HA ++R D Y AS L I L + +FD
Sbjct: 35 ISLIDRCSSLRQL---KQTHAHMIRTGMFSDPYSASKLFAIAALSSFASLEYARKVFDEI 91
Query: 289 ASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFS--SGVMPDDVTLVGVLSACSYTGKVKE 346
+ WN++I YA S+ F +M S S P+ T ++ A + +
Sbjct: 92 PQPNSFTWNTLIRAYASGPDPVCSIWAFLDMVSSESQCYPNKYTFPFLIKAAAEVSSLSL 151
Query: 347 GREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLG 404
G+ + M K V ++ G ++ A K+ + E D + W S++
Sbjct: 152 GQSL-HGMAIKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIK-EKDVVSWNSMIN 207
>gi|225464281|ref|XP_002271266.1| PREDICTED: pentatricopeptide repeat-containing protein At3g16610
[Vitis vinifera]
Length = 785
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 237/646 (36%), Positives = 361/646 (55%), Gaps = 49/646 (7%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDM 62
E +V TA+V Y + G++ EA LF M ++VV+W M+ G DDA +L
Sbjct: 141 ESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQ 200
Query: 63 MPEKDVVAQTNMVLG-------------------YCQDGRVDEG---------------- 87
M E+ + ++ ++G YC D G
Sbjct: 201 MQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQC 260
Query: 88 ----REIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYT-- 141
R+IFD M +N +SW+ MI GYV ++ + A +LF+ M K+ + T + +G
Sbjct: 261 LLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALELFDQMILKDAMDPTPVTLGSVLR 320
Query: 142 QCGRIQDAWE-------LFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDAT 194
C ++ D + K + ++ N+++ + G + A FD+M KD +
Sbjct: 321 ACAKLTDLSRGRKLHCYIIKLGSVLDILLGNTLLSMYAKCGVIDDAIRFFDEMNPKDSVS 380
Query: 195 WSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLV 254
+S ++ + G + +F +MQ G+ + +++ VL C+ LA+L HG H L+
Sbjct: 381 FSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLI 440
Query: 255 RCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLK 314
F D + + LI MY KCG++ + +F+ DIV WN++I GY +GLG ++L
Sbjct: 441 VRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALG 500
Query: 315 VFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLL 374
+FH++ + G+ PDD+T + +LS+CS++G V EGR F++M + + P+ EH CMVD+L
Sbjct: 501 LFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDIL 560
Query: 375 GRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYI 434
GRAG +++A I MPFEPD IW +LL ACR H ++L E +KK+ L P++ G ++
Sbjct: 561 GRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHKNIELGEEVSKKIQSLGPESTGNFV 620
Query: 435 LLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIM 494
LLSNIY++ GR+ D A +R + + K PGCSWIE+ VH F G D SH + I
Sbjct: 621 LLSNIYSAAGRWDDAAHIRITQKDWGLKKIPGCSWIEINGIVHAFVGGD-QSHLQLSQIN 679
Query: 495 RMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVM 554
R LE++ ++ GY + SFV DV+EEEK L YHSEKLA+A+G++ L G PI V
Sbjct: 680 RKLEELLVEMKRLGYQAECSFVFQDVEEEEKEQILLYHSEKLAIAFGILNLKAGRPILVT 739
Query: 555 KNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
KNLRVCGDCH+AIK ++ + REI +RDANRFHHFK+G C+C D+W
Sbjct: 740 KNLRVCGDCHTAIKFMTLITKREITVRDANRFHHFKNGTCNCGDFW 785
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 113/424 (26%), Positives = 194/424 (45%), Gaps = 27/424 (6%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM------PEKNVVSWTV-MLGGF--IRDS 51
+P +V+ W ++R Y G A L+ M P K + + G I D
Sbjct: 69 IPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDG 128
Query: 52 -RIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYV 110
I ++F + E DV T +V Y + G + E + +F M ++V++W MI+G
Sbjct: 129 VEIHSHAKMFGL--ESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCS 186
Query: 111 NNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVAS--NSMI 168
D A +L M E+ ++ ++G A KA+ V S N ++
Sbjct: 187 LYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVV 246
Query: 169 LGLGQNGEVQK------ARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLF-TLMQKE 221
+G G K AR +FD M +++ +WS MI Y E ++LF ++ K+
Sbjct: 247 VGTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALELFDQMILKD 306
Query: 222 GVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKG 281
+ +L SVL CA L L GR++H +++ +D+ + + L++MY KCG +
Sbjct: 307 AMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGSVLDILLGNTLLSMYAKCGVIDDA 366
Query: 282 KLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYT 341
FD KD V +++I+SG Q G +L +F M SG+ PD T++GVL ACS+
Sbjct: 367 IRFFDEMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHL 426
Query: 342 GKVKEGREIFESMKSKYLVEPKTEHYAC--MVDLLGRAGQVEDAMKLIEAMPFEPDAIIW 399
++ G F S + T+ C ++D+ + G++ A ++ M D + W
Sbjct: 427 AALQHG---FCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMD-RHDIVSW 482
Query: 400 GSLL 403
+++
Sbjct: 483 NAMI 486
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/344 (25%), Positives = 154/344 (44%), Gaps = 23/344 (6%)
Query: 78 YCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPE----KNEVSW 133
Y +V R +FDE+P +VI W +I Y N D A L+ M N+ ++
Sbjct: 53 YLSCNQVVLARRLFDEIPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTY 112
Query: 134 TAMLMGYTQCGRIQDAWELFKAMPM----KSVVASNSMILGLGQNGEVQKARVVFDQMRE 189
+L + I+D E+ M V +++ + G + +A+ +F M
Sbjct: 113 PFVLKACSGLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSH 172
Query: 190 KDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQV 249
+D W+ MI G + + L MQ+EG+ N +++ VL +L HG+ +
Sbjct: 173 RDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKAL 232
Query: 250 HAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLG 309
H VR FD V V + L+ MY KC L+ + IFD ++ V W+++I GY
Sbjct: 233 HGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCM 292
Query: 310 EKSLKVFHEMFSSGVM-PDDVTLVGVLSACSYTGKVKEGREI------FESMKSKYLVEP 362
+++L++F +M M P VTL VL AC+ + GR++ S+ L
Sbjct: 293 KEALELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGSVLDILLGNT 352
Query: 363 KTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGAC 406
YA + G ++DA++ + M D++ + +++ C
Sbjct: 353 LLSMYA-------KCGVIDDAIRFFDEMN-PKDSVSFSAIVSGC 388
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 125/265 (47%), Gaps = 19/265 (7%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWT-VMLGGFIRD-SRIDDARR 58
M RN VSW+AM+ GYV + EA LF QM K+ + T V LG +R +++ D R
Sbjct: 271 MGVRNEVSWSAMIGGYVASDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSR 330
Query: 59 -------LFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVN 111
+ + D++ ++ Y + G +D+ FDEM K+ +S++ ++SG V
Sbjct: 331 GRKLHCYIIKLGSVLDILLGNTLLSMYAKCGVIDDAIRFFDEMNPKDSVSFSAIVSGCVQ 390
Query: 112 NNRIDVARKLFEVMPEKN-EVSWTAML--------MGYTQCGRIQDAWELFKAMPMKSVV 162
N VA +F +M + T ML + Q G + + + +++
Sbjct: 391 NGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLI 450
Query: 163 ASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEG 222
N++I + G++ AR VF++M D +W+ MI Y G +E + LF + G
Sbjct: 451 C-NALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALG 509
Query: 223 VRVNFPSLISVLSVCASLASLDHGR 247
++ + + I +LS C+ + GR
Sbjct: 510 LKPDDITFICLLSSCSHSGLVMEGR 534
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 99/204 (48%), Gaps = 9/204 (4%)
Query: 231 ISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFAS 290
+ +L C SL +++H ++ + D V L +Y+ C ++V + +FD +
Sbjct: 12 LHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPN 71
Query: 291 KDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREI 350
+++WN II YA G + ++ ++H M GV P+ T VL ACS +++G EI
Sbjct: 72 PSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEI 131
Query: 351 FESMKSKYLVEPKTEHYAC--MVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRT 408
K + +++ + C +VD + G + +A +L +M D + W +++ C
Sbjct: 132 HSHAK---MFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHR-DVVAWNAMIAGCSL 187
Query: 409 HMKLDLAEVAAKKLLQLEPKNAGP 432
+ L + A + ++Q++ + P
Sbjct: 188 Y---GLCDDAVQLIMQMQEEGICP 208
>gi|225438894|ref|XP_002279137.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Vitis vinifera]
Length = 628
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 232/558 (41%), Positives = 324/558 (58%), Gaps = 36/558 (6%)
Query: 78 YCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVM----PEKNEVSW 133
Y GR+D +F +V WT +I G+ + A + M E N ++
Sbjct: 72 YASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFTF 131
Query: 134 TAML-----------------MG--------------YTQCGRIQDAWELFKAMPMKSVV 162
+++L +G Y + G + A +LF MP KS+V
Sbjct: 132 SSILKLCPIEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPEKSLV 191
Query: 163 ASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEG 222
+ +M+ ++GE+ ARV+FD M E+D W+ MI Y + G E + LF M K
Sbjct: 192 SLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAK 251
Query: 223 VRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGK 282
+ N +++SVLS C L +L+ GR VH+ + +V+V + L+ MY KCG L +
Sbjct: 252 AKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDAR 311
Query: 283 LIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTG 342
L+FD KD+V WNS+I GYA +G +++L++F M G+ P ++T +G+LSAC ++G
Sbjct: 312 LVFDKIDDKDVVAWNSMIVGYAMHGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSG 371
Query: 343 KVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSL 402
V EG +IF MK +Y +EPK EHY CMV+LLGRAG VE A +L++ M EPD ++WG+L
Sbjct: 372 WVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTL 431
Query: 403 LGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVI 462
LGACR H K+ L E + L+ N+G YILLSNIYA+ G + VA LR M+ V
Sbjct: 432 LGACRLHGKIALGEKIVELLVDQNLANSGTYILLSNIYAAVGNWDGVARLRTMMKDSGVK 491
Query: 463 KPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDE 522
K PGCS IEV KVH F ++HP+ I MLE+I G L+ GY P + VLHD+ E
Sbjct: 492 KEPGCSSIEVNNKVHEFLAGG-LNHPKRKEIYMMLEEINGWLKSHGYTPQTDIVLHDIGE 550
Query: 523 EEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRD 582
EK SL HSEKLA+A+GL+ G I+++KNLRVC DCH KLISK+ GR+I++RD
Sbjct: 551 TEKERSLEVHSEKLAIAFGLINTQPGTTIKIVKNLRVCADCHEVTKLISKITGRKIVVRD 610
Query: 583 ANRFHHFKDGLCSCRDYW 600
NRFHHF +G CSC DYW
Sbjct: 611 RNRFHHFVNGSCSCGDYW 628
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 81/361 (22%), Positives = 159/361 (44%), Gaps = 50/361 (13%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMP 64
+V WTA++ G+ G+ +A + QM + V ++ I+ + L
Sbjct: 92 SVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFTFSSILKLCPIEPGKALHSQAV 151
Query: 65 ----EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARK 120
+ D+ +T ++ Y + G V +++FD MP+K+++S T M++ Y + +D AR
Sbjct: 152 KLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARV 211
Query: 121 LFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELF------KAMPMKSVVAS---------- 164
LF+ M E++ V W M+ GYTQ G +A LF KA P + V S
Sbjct: 212 LFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGA 271
Query: 165 -----------------------NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKV 201
+++ + G ++ AR+VFD++ +KD W+ MI
Sbjct: 272 LESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVG 331
Query: 202 YERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVD 261
Y G+ E + LF M + G+ + I +LS C + G + ++ + ++ ++
Sbjct: 332 YAMHGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIFNKM-KDEYGIE 390
Query: 262 VYVA--SVLITMYIKCGELVKGKLIFDNFA-SKDIVMWNSIISG---YAQYGLGEKSLKV 315
+ ++ + + G + + + N D V+W +++ + + LGEK +++
Sbjct: 391 PKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGACRLHGKIALGEKIVEL 450
Query: 316 F 316
Sbjct: 451 L 451
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 126/258 (48%), Gaps = 17/258 (6%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDA---- 56
MPE+++VS TAM+ Y + G + A LF M E++ V W VM+ G+ ++ ++A
Sbjct: 185 MPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLF 244
Query: 57 RRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKK----NVISWTTMISGYVNN 112
RR+ + + V +++ Q G ++ GR + + NV T ++ Y
Sbjct: 245 RRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKC 304
Query: 113 NRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGL- 171
++ AR +F+ + +K+ V+W +M++GY G Q+A +LFK+M + +N +G+
Sbjct: 305 GSLEDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQEALQLFKSMCRMGLHPTNITFIGIL 364
Query: 172 ---GQNGEVQKARVVFDQMR-----EKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGV 223
G +G V + +F++M+ E + M+ + R G+ + +L M E
Sbjct: 365 SACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPD 424
Query: 224 RVNFPSLISVLSVCASLA 241
V + +L+ + +A
Sbjct: 425 PVLWGTLLGACRLHGKIA 442
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 74/177 (41%), Gaps = 8/177 (4%)
Query: 242 SLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIIS 301
++ H Q+HA L R D + L Y G L +F + + W +II
Sbjct: 42 TISHLLQIHAVLFRHGLDHHPILNFKLQRSYASLGRLDYSVALFGRTQNPSVFFWTAIIH 101
Query: 302 GYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSY-TGKVKEGREIFESMKSKYLV 360
G+A GL E++L + +M + GV P+ T +L C GK + + S V
Sbjct: 102 GHALRGLHEQALNFYAQMLTQGVEPNAFTFSSILKLCPIEPGKALHSQAVKLGFDSDLYV 161
Query: 361 EPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEV 417
++D+ R G V A +L + MP E + ++L H +LD A V
Sbjct: 162 RTG------LLDVYARGGDVVSAQQLFDTMP-EKSLVSLTAMLTCYAKHGELDAARV 211
>gi|15223802|ref|NP_173449.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806503|sp|Q9LNU6.2|PPR53_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g20230
gi|332191832|gb|AEE29953.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 760
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 225/605 (37%), Positives = 356/605 (58%), Gaps = 48/605 (7%)
Query: 43 MLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMP----KKN 98
M ++R R+ DAR++FD M +KDVV + ++ Y + G ++E I EM + N
Sbjct: 157 MFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEAN 216
Query: 99 VISWTTMISGYVNNNRIDVARKLFE----------------VMPE--------------- 127
++SW ++SG+ + A +F+ V+P
Sbjct: 217 IVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHG 276
Query: 128 --------KNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQK 179
K++ +AM+ Y + G + LF M N+ I GL +NG V K
Sbjct: 277 YVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDK 336
Query: 180 ARVVFDQMREK----DDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLS 235
A +F+ +E+ + +W+ +I + G ++E ++LF MQ GV+ N ++ S+L
Sbjct: 337 ALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLP 396
Query: 236 VCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVM 295
C ++A+L HGR H VR +V+V S LI MY KCG + +++F+ +K++V
Sbjct: 397 ACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVC 456
Query: 296 WNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMK 355
WNS+++G++ +G ++ + +F + + + PD ++ +LSAC G EG + F+ M
Sbjct: 457 WNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMS 516
Query: 356 SKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLA 415
+Y ++P+ EHY+CMV+LLGRAG++++A LI+ MPFEPD+ +WG+LL +CR +DLA
Sbjct: 517 EEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLA 576
Query: 416 EVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKK 475
E+AA+KL LEP+N G Y+LLSNIYA++G + +V +R M + K PGCSWI+V+ +
Sbjct: 577 EIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNR 636
Query: 476 VHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEK 535
V+ D SHP+ I +++I +R++G+ P+ F LHDV+E+E+ L HSEK
Sbjct: 637 VYTLLAGD-KSHPQIDQITEKMDEISKEMRKSGHRPNLDFALHDVEEQEQEQMLWGHSEK 695
Query: 536 LAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCS 595
LAV +GL+ P+G P++V+KNLR+CGDCH+ IK IS GREI +RD NRFHHFKDG+CS
Sbjct: 696 LAVVFGLLNTPDGTPLQVIKNLRICGDCHAVIKFISSYAGREIFIRDTNRFHHFKDGICS 755
Query: 596 CRDYW 600
C D+W
Sbjct: 756 CGDFW 760
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 91/175 (52%)
Query: 180 ARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCAS 239
A +V + + ++S +I + + I +F+ M G+ + L ++ VCA
Sbjct: 69 ADLVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAE 128
Query: 240 LASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSI 299
L++ G+Q+H D+D +V + MY++CG + + +FD + KD+V +++
Sbjct: 129 LSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSAL 188
Query: 300 ISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESM 354
+ YA+ G E+ +++ EM SSG+ + V+ G+LS + +G KE +F+ +
Sbjct: 189 LCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKI 243
>gi|357116509|ref|XP_003560023.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Brachypodium distachyon]
Length = 804
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 220/593 (37%), Positives = 354/593 (59%), Gaps = 13/593 (2%)
Query: 20 GMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYC 79
G+ +A + +MPEK+ ++WT ++ G +R + AR F+ + + V M+ GY
Sbjct: 213 GVTRDARKVLDEMPEKDELTWTTIVVGHVRKGDVHAARSAFEEIDGEFDVVWNAMISGYV 272
Query: 80 QDGRVDEGREIFDEMPKKNV----ISWTTMISGYVNNNRIDVARKLF--------EVMPE 127
Q G E E+F M K + ++T+++S N + + + +PE
Sbjct: 273 QSGMCAEAFELFRRMVSKRIPPDEFTFTSLLSACANAGFFLHGKSVHGQFIRLQPDFVPE 332
Query: 128 KNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQM 187
A++ Y++ G+I A ++F +M +K VV+ N+++ G ++G + A +F +M
Sbjct: 333 AALPVNNALVTLYSKSGKIAVATKIFDSMTLKDVVSWNTILSGYIESGCLDNAARIFKEM 392
Query: 188 REKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGR 247
K + +W M+ Y G + + LF M+ E V+ + ++ C L +L HG+
Sbjct: 393 PYKSELSWMVMVSGYVHGGLAEDALKLFNQMRSEDVKPCDYTYAGAVAACGELGALKHGK 452
Query: 248 QVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYG 307
Q+HA LV+C F+ + L+TMY +CG + +L+F + D V WN++IS Q+G
Sbjct: 453 QLHAHLVQCGFEASNSAGNALLTMYARCGAVKDARLVFLVMPNVDSVSWNAMISALGQHG 512
Query: 308 LGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHY 367
G ++L++F +M + G+ PD ++ + +L+AC++ G V +G + FESM+ + + P +HY
Sbjct: 513 HGREALELFDQMVAQGIYPDRISFLTILTACNHAGLVDDGFQYFESMERDFGISPGEDHY 572
Query: 368 ACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEP 427
A ++DLLGRAG++ +A LI+ MPFEP IW ++L CR + ++L AA +L ++ P
Sbjct: 573 ARLIDLLGRAGRIGEARDLIKTMPFEPTPAIWEAILSGCRINGDMELGAYAADQLFKMVP 632
Query: 428 KNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSH 487
++ G YILLSN Y++ GR+ D A +RK MR R V K PGCSWIEV KVH+F D H
Sbjct: 633 EHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEVGNKVHVFLVGD-TKH 691
Query: 488 PEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPE 547
P+ + R LE +G +R+ GY PD+ F L D+ EK + L HSE+LAV++GL+KLP
Sbjct: 692 PDAHEVYRFLEMVGAKMRKLGYVPDTKFALQDMAPHEKEYVLFAHSERLAVSFGLLKLPA 751
Query: 548 GVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
G + V+KNL++CGDCH+A+ +S+ +GREI++RD RFHHFKDG CSC +YW
Sbjct: 752 GATVTVLKNLKICGDCHTAMMFMSRAVGREIVVRDVRRFHHFKDGECSCGNYW 804
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 103/424 (24%), Positives = 191/424 (45%), Gaps = 54/424 (12%)
Query: 38 VSWTVMLGGFIRDSRIDDARRLFDMMP--EKDVVAQTNMVLGYCQDGRVDEGREIF---- 91
V+ T ++ + R+ D+ FD +P +D V M+ + + +F
Sbjct: 90 VAATSLVSAYAVAGRLRDSAAFFDSVPVARRDTVLHNAMISAFARASLAAPAVSVFRSLL 149
Query: 92 --DEMPKKNVISWTTMIS--GYVNNNRIDVARKLFEVMPEKNEVS----WTAMLMGYTQC 143
D+ + + S+T+++S G +++ + +L + + + A++ Y +C
Sbjct: 150 ASDDSLRPDDYSFTSLLSAVGQMHDLAVSHCTQLHCAVHKLGAGAVLSVSNALIALYMKC 209
Query: 144 ---GRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIK 200
G +DA ++ MP K + ++++G + G+V AR F+++ + D W+ MI
Sbjct: 210 DAPGVTRDARKVLDEMPEKDELTWTTIVVGHVRKGDVHAARSAFEEIDGEFDVVWNAMIS 269
Query: 201 VYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFD- 259
Y + G E +LF M + + + + S+LS CA+ HG+ VH Q +R Q D
Sbjct: 270 GYVQSGMCAEAFELFRRMVSKRIPPDEFTFTSLLSACANAGFFLHGKSVHGQFIRLQPDF 329
Query: 260 ---VDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQY---------- 306
+ V + L+T+Y K G++ IFD+ KD+V WN+I+SGY +
Sbjct: 330 VPEAALPVNNALVTLYSKSGKIAVATKIFDSMTLKDVVSWNTILSGYIESGCLDNAARIF 389
Query: 307 ---------------------GLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVK 345
GL E +LK+F++M S V P D T G ++AC G +K
Sbjct: 390 KEMPYKSELSWMVMVSGYVHGGLAEDALKLFNQMRSEDVKPCDYTYAGAVAACGELGALK 449
Query: 346 EGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
G+++ + + E ++ + R G V+DA + MP D++ W +++ A
Sbjct: 450 HGKQLHAHL-VQCGFEASNSAGNALLTMYARCGAVKDARLVFLVMP-NVDSVSWNAMISA 507
Query: 406 CRTH 409
H
Sbjct: 508 LGQH 511
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 91/389 (23%), Positives = 164/389 (42%), Gaps = 90/389 (23%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MPE++ ++WT +V G+V +G + A + F ++ + V W M+ G+++ +A LF
Sbjct: 225 MPEKDELTWTTIVVGHVRKGDVHAARSAFEEIDGEFDVVWNAMISGYVQSGMCAEAFELF 284
Query: 61 -------------------------------------------DMMPEKDVVAQTNMVLG 77
D +PE + +V
Sbjct: 285 RRMVSKRIPPDEFTFTSLLSACANAGFFLHGKSVHGQFIRLQPDFVPEAALPVNNALVTL 344
Query: 78 YCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAML 137
Y + G++ +IFD M K+V+SW T++SGY+ + +D A ++F+ MP K+E+SW M+
Sbjct: 345 YSKSGKIAVATKIFDSMTLKDVVSWNTILSGYIESGCLDNAARIFKEMPYKSELSWMVMV 404
Query: 138 MGYTQCGRIQDAWELFKAMPMKSV------------------------------------ 161
GY G +DA +LF M + V
Sbjct: 405 SGYVHGGLAEDALKLFNQMRSEDVKPCDYTYAGAVAACGELGALKHGKQLHAHLVQCGFE 464
Query: 162 ---VASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLM 218
A N+++ + G V+ AR+VF M D +W+ MI + G+ E ++LF M
Sbjct: 465 ASNSAGNALLTMYARCGAVKDARLVFLVMPNVDSVSWNAMISALGQHGHGREALELFDQM 524
Query: 219 QKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDV----DVYVASVLITMYIK 274
+G+ + S +++L+ C +D G Q + R F + D Y + LI + +
Sbjct: 525 VAQGIYPDRISFLTILTACNHAGLVDDGFQYFESMER-DFGISPGEDHY--ARLIDLLGR 581
Query: 275 CGELVKGKLIFDNFASKDI-VMWNSIISG 302
G + + + + + +W +I+SG
Sbjct: 582 AGRIGEARDLIKTMPFEPTPAIWEAILSG 610
>gi|15227619|ref|NP_180537.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75100656|sp|O82380.1|PP175_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g29760, chloroplastic; Flags: Precursor
gi|3582328|gb|AAC35225.1| hypothetical protein [Arabidopsis thaliana]
gi|330253207|gb|AEC08301.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 738
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 233/593 (39%), Positives = 352/593 (59%), Gaps = 26/593 (4%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVV 69
+++ Y G + A +F + EK+VVSW M+ GF++ D A LF M +DV
Sbjct: 170 NSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVK 229
Query: 70 AQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKN 129
A ++G + K + + + Y+ NR++V L
Sbjct: 230 ASHVTMVG------------VLSACAKIRNLEFGRQVCSYIEENRVNVNLTLA------- 270
Query: 130 EVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMRE 189
AML YT+CG I+DA LF AM K V +M+ G + + + AR V + M +
Sbjct: 271 ----NAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQ 326
Query: 190 KDDATWSGMIKVYERKGYELEVIDLFTLMQ-KEGVRVNFPSLISVLSVCASLASLDHGRQ 248
KD W+ +I YE+ G E + +F +Q ++ +++N +L+S LS CA + +L+ GR
Sbjct: 327 KDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRW 386
Query: 249 VHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGL 308
+H+ + + ++ +V S LI MY KCG+L K + +F++ +D+ +W+++I G A +G
Sbjct: 387 IHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGC 446
Query: 309 GEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYA 368
G +++ +F++M + V P+ VT V ACS+TG V E +F M+S Y + P+ +HYA
Sbjct: 447 GNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYA 506
Query: 369 CMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPK 428
C+VD+LGR+G +E A+K IEAMP P +WG+LLGAC+ H L+LAE+A +LL+LEP+
Sbjct: 507 CIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPR 566
Query: 429 NAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHP 488
N G ++LLSNIYA G++ +V+ELRK+MR + K PGCS IE++ +H F D +HP
Sbjct: 567 NDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGD-NAHP 625
Query: 489 EHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEE-KVHSLRYHSEKLAVAYGLVKLPE 547
+ L ++ L+ GY P+ S VL ++EEE K SL HSEKLA+ YGL+
Sbjct: 626 MSEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEA 685
Query: 548 GVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
IRV+KNLRVCGDCHS KLIS++ REII+RD RFHHF++G CSC D+W
Sbjct: 686 PKVIRVIKNLRVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRNGQCSCNDFW 738
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 95/370 (25%), Positives = 177/370 (47%), Gaps = 45/370 (12%)
Query: 82 GRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLF-----EVMPEKNEVSWTAM 136
++ R++FDE+PK N +W T+I Y + ++ F E N+ ++ +
Sbjct: 78 ASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFL 137
Query: 137 LMGYTQCGRIQDAWELFKAMPMKSVVAS-----NSMILGLGQNGEVQKARVVFDQMREKD 191
+ + + L M +KS V S NS+I G++ A VF ++EKD
Sbjct: 138 IKAAAEVSSLSLGQSL-HGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKD 196
Query: 192 DATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHA 251
+W+ MI + +KG + ++LF M+ E V+ + +++ VLS CA + +L+ GRQV +
Sbjct: 197 VVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCS 256
Query: 252 QLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFD------------------------- 286
+ + +V++ +A+ ++ MY KCG + K +FD
Sbjct: 257 YIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEA 316
Query: 287 ------NFASKDIVMWNSIISGYAQYGLGEKSLKVFHEM-FSSGVMPDDVTLVGVLSACS 339
+ KDIV WN++IS Y Q G ++L VFHE+ + + +TLV LSAC+
Sbjct: 317 AREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACA 376
Query: 340 YTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIW 399
G ++ GR I +K K+ + + ++ + + G +E + ++ ++ + D +W
Sbjct: 377 QVGALELGRWIHSYIK-KHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVE-KRDVFVW 434
Query: 400 GSLLGACRTH 409
+++G H
Sbjct: 435 SAMIGGLAMH 444
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/300 (30%), Positives = 150/300 (50%), Gaps = 22/300 (7%)
Query: 170 GLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGV----RV 225
L ++ AR VFD++ + + W+ +I+ Y + I F M E +
Sbjct: 73 ALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKY 132
Query: 226 NFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIF 285
FP LI A ++SL G+ +H V+ DV+VA+ LI Y CG+L +F
Sbjct: 133 TFPFLI---KAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVF 189
Query: 286 DNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVK 345
KD+V WNS+I+G+ Q G +K+L++F +M S V VT+VGVLSAC+ ++
Sbjct: 190 TTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLE 249
Query: 346 EGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
GR++ ++ + T A M+D+ + G +EDA +L +AM E D + W ++L
Sbjct: 250 FGRQVCSYIEENRVNVNLTLANA-MLDMYTKCGSIEDAKRLFDAME-EKDNVTWTTMLDG 307
Query: 406 CRTHMKLDLAEVAAKKLLQLEP-KNAGPYILLSNIYASQGR-------FHDVAELRKNMR 457
+ AA+++L P K+ + L + Y G+ FH++ +L+KNM+
Sbjct: 308 YAISEDYE----AAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHEL-QLQKNMK 362
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 112/228 (49%), Gaps = 13/228 (5%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMP 64
N+ AM+ Y + G I +A LF M EK+ V+WT ML G+ + AR + + MP
Sbjct: 266 NLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMP 325
Query: 65 EKDVVAQTNMVLGYCQDGRVDEGREIFDEMP-----KKNVISWTTMISGYVNNNRIDVAR 119
+KD+VA ++ Y Q+G+ +E +F E+ K N I+ + +S +++ R
Sbjct: 326 QKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGR 385
Query: 120 KLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNG 175
+ + + N +A++ Y++CG ++ + E+F ++ + V ++MI GL +G
Sbjct: 386 WIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHG 445
Query: 176 EVQKARVVFDQMREK----DDATWSGMIKVYERKGYELEVIDLFTLMQ 219
+A +F +M+E + T++ + G E LF M+
Sbjct: 446 CGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQME 493
Score = 43.9 bits (102), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 70/178 (39%), Gaps = 8/178 (4%)
Query: 231 ISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYI--KCGELVKGKLIFDNF 288
IS++ C SL L +Q H ++R D Y AS L M L + +FD
Sbjct: 34 ISLIERCVSLRQL---KQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEI 90
Query: 289 ASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFS-SGVMPDDVTLVGVLSACSYTGKVKEG 347
+ WN++I YA S+ F +M S S P+ T ++ A + + G
Sbjct: 91 PKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLG 150
Query: 348 REIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
+ + M K V ++ G ++ A K+ + E D + W S++
Sbjct: 151 QSL-HGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIK-EKDVVSWNSMING 206
>gi|356564895|ref|XP_003550682.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Glycine max]
Length = 778
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 243/651 (37%), Positives = 362/651 (55%), Gaps = 60/651 (9%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF-D 61
+ N+ +A+V Y + + A +F +MP+++ V W M+ G +R+ DD+ ++F D
Sbjct: 135 DSNLFVASALVDLYCKFSRVAYARKVFDKMPDRDTVLWNTMITGLVRNCCYDDSVQVFKD 194
Query: 62 MMPE-----KDVVAQTNMVLGYCQDGRVDEGREI--------FDEMPKKNVISWTTMISG 108
M+ + VA + Q+ +V G + FD+ T +IS
Sbjct: 195 MVAQGVRLDSTTVATVLPAVAEMQEVKVGMGIQCLALKLGFHFDDY------VLTGLISV 248
Query: 109 YVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMI 168
+ +D AR LF ++ + + VS+ A++ G++ G + A + F+ + + S+S +
Sbjct: 249 FSKCEDVDTARLLFGMIRKPDLVSYNALISGFSCNGETECAVKYFRELLVSGQRVSSSTM 308
Query: 169 LGL---------------------------------------GQNGEVQKARVVFDQMRE 189
+GL + E+ AR +FD+ E
Sbjct: 309 VGLIPVSSPFGHLHLACCIQGFCVKSGTILQPSVSTALTTIYSRLNEIDLARQLFDESSE 368
Query: 190 KDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQV 249
K A W+ MI Y + G I LF M N ++ S+LS CA L +L G+ V
Sbjct: 369 KTVAAWNAMISGYAQSGLTEMAISLFQEMMTTEFTPNPVTITSILSACAQLGALSFGKSV 428
Query: 250 HAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLG 309
H + + ++YV++ LI MY KCG + + +FD + K+ V WN++I GY +G G
Sbjct: 429 HQLIKSKNLEQNIYVSTALIDMYAKCGNISEASQLFDLTSEKNTVTWNTMIFGYGLHGYG 488
Query: 310 EKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYAC 369
+++LK+F+EM G P VT + VL ACS+ G V+EG EIF +M +KY +EP EHYAC
Sbjct: 489 DEALKLFNEMLHLGFQPSSVTFLSVLYACSHAGLVREGDEIFHAMVNKYRIEPLAEHYAC 548
Query: 370 MVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKN 429
MVD+LGRAGQ+E A++ I MP EP +WG+LLGAC H +LA VA+++L +L+P N
Sbjct: 549 MVDILGRAGQLEKALEFIRKMPVEPGPAVWGTLLGACMIHKDTNLARVASERLFELDPGN 608
Query: 430 AGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPE 489
G Y+LLSNIY+ + F A +R+ ++KRN+ K PGC+ IEV H+F D SH +
Sbjct: 609 VGYYVLLSNIYSVERNFPKAASVREAVKKRNLSKTPGCTLIEVNGTPHVFVCGD-RSHSQ 667
Query: 490 HPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGV 549
I LE++ G +RE GY ++ LHDV+EEEK HSEKLA+A+GL+ G
Sbjct: 668 TTSIYAKLEELTGKMREMGYQSETVTALHDVEEEEKELMFNVHSEKLAIAFGLITTEPGT 727
Query: 550 PIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
IR++KNLRVC DCH+A K ISK+ R I++RDANRFHHFKDG+CSC DYW
Sbjct: 728 EIRIIKNLRVCLDCHAATKFISKITERVIVVRDANRFHHFKDGICSCGDYW 778
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 107/514 (20%), Positives = 224/514 (43%), Gaps = 61/514 (11%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRL--F 60
+ ++ + T + + + G A LF+ +P+ ++ + V++ GF S DA + +
Sbjct: 37 QHDLATVTKLTQKLFDVGATRHARALFFSVPKPDIFLFNVLIKGF---SFSPDASSISFY 93
Query: 61 DMMPEKDVVAQTNMVLGYCQDGRVDE-------GREIFDEMPKKNVISWTTMISGYVNNN 113
+ + ++ N + D+ + D N+ + ++ Y +
Sbjct: 94 THLLKNTTLSPDNFTYAFAISASPDDNLGMCLHAHAVVDGF-DSNLFVASALVDLYCKFS 152
Query: 114 RIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMI----- 168
R+ ARK+F+ MP+++ V W M+ G + D+ ++FK M + V ++ +
Sbjct: 153 RVAYARKVFDKMPDRDTVLWNTMITGLVRNCCYDDSVQVFKDMVAQGVRLDSTTVATVLP 212
Query: 169 ---------LGLG-------------------------QNGEVQKARVVFDQMREKDDAT 194
+G+G + +V AR++F +R+ D +
Sbjct: 213 AVAEMQEVKVGMGIQCLALKLGFHFDDYVLTGLISVFSKCEDVDTARLLFGMIRKPDLVS 272
Query: 195 WSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLV 254
++ +I + G + F + G RV+ +++ ++ V + L + V
Sbjct: 273 YNALISGFSCNGETECAVKYFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLACCIQGFCV 332
Query: 255 RCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLK 314
+ + V++ L T+Y + E+ + +FD + K + WN++ISGYAQ GL E ++
Sbjct: 333 KSGTILQPSVSTALTTIYSRLNEIDLARQLFDESSEKTVAAWNAMISGYAQSGLTEMAIS 392
Query: 315 VFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLL 374
+F EM ++ P+ VT+ +LSAC+ G + G+ + + +KSK L E ++D+
Sbjct: 393 LFQEMMTTEFTPNPVTITSILSACAQLGALSFGKSVHQLIKSKNL-EQNIYVSTALIDMY 451
Query: 375 GRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQL--EPKNAGP 432
+ G + +A +L + + E + + W +++ H D A ++L L +P +
Sbjct: 452 AKCGNISEASQLFD-LTSEKNTVTWNTMIFGYGLHGYGDEALKLFNEMLHLGFQPSSV-- 508
Query: 433 YILLSNIYASQ--GRFHDVAELRKNMRKRNVIKP 464
LS +YA G + E+ M + I+P
Sbjct: 509 -TFLSVLYACSHAGLVREGDEIFHAMVNKYRIEP 541
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/175 (20%), Positives = 78/175 (44%), Gaps = 11/175 (6%)
Query: 232 SVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASK 291
++L++ + + H + HAQL+R + D+ + L G + +F +
Sbjct: 10 TLLALISKACTFPHLAETHAQLIRNGYQHDLATVTKLTQKLFDVGATRHARALFFSVPKP 69
Query: 292 DIVMWNSIISGYAQYGLGEKSLKVF-HEMFSSGVMPDDVTLVGVLSAC--SYTGKVKEGR 348
DI ++N +I G++ + S+ + H + ++ + PD+ T +SA G
Sbjct: 70 DIFLFNVLIKGFS-FSPDASSISFYTHLLKNTTLSPDNFTYAFAISASPDDNLGMCLHAH 128
Query: 349 EIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
+ + S V + +VDL + +V A K+ + MP + D ++W +++
Sbjct: 129 AVVDGFDSNLFVA------SALVDLYCKFSRVAYARKVFDKMP-DRDTVLWNTMI 176
>gi|328774751|gb|AEB39775.1| pentatricopeptide repeat protein 71 [Funaria hygrometrica]
Length = 837
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 253/714 (35%), Positives = 375/714 (52%), Gaps = 118/714 (16%)
Query: 4 RNVVSWTAMVRGYVEEGMITEAGTLFWQMP----EKNVVSWTVMLG-------------- 45
+ VV+W A++ GY + G + EA LF QM E +++++ ++L
Sbjct: 125 KTVVTWNAIIAGYAQLGHVKEAFALFRQMVDEAMEPSIITFLIVLDACSSPAGLKLGKEF 184
Query: 46 -------GFIRDSRI--------------DDARRLFDMMPEKDVVAQTNMVLGYCQDGRV 84
GF+ D RI D AR++FD + ++DV M+ GY + G
Sbjct: 185 HAQVIKVGFVSDFRIGTALVSMYVKGGSMDGARQVFDGLYKRDVSTFNVMIGGYAKSGDG 244
Query: 85 DEGREIFDEMP----KKNVISWTTMISG-------------------------------- 108
++ ++F M K N IS+ +++ G
Sbjct: 245 EKAFQLFYRMQQEGFKPNRISFLSILDGCSTPEALAWGKAVHAQCMNTGLVDDVRVATAL 304
Query: 109 ---YVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSV---- 161
Y+ I+ AR++F+ M ++ VSWT M+ GY + I+DA+ LF M + +
Sbjct: 305 IRMYMGCGSIEGARRVFDKMKVRDVVSWTVMIRGYAENSNIEDAFGLFATMQEEGIQPDR 364
Query: 162 ---------------------VASNSMILGLGQN--------------GEVQKARVVFDQ 186
+ S + G G + G ++ AR VFD
Sbjct: 365 ITYIHIINACASSADLSLAREIHSQVVRAGFGTDLLVDTALVHMYAKCGAIKDARQVFDA 424
Query: 187 MREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHG 246
M +D +WS MI Y G E + F LM++ V + + I++L+ C L +LD G
Sbjct: 425 MSRRDVVSWSAMIGAYVENGCGEEAFETFHLMKRNNVEPDVVTYINLLNACGHLGALDLG 484
Query: 247 RQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQY 306
+++ Q ++ + V + LI M +K G + + + IF+N +D+V WN +I GY+ +
Sbjct: 485 MEIYTQAIKADLVSHIPVGNALINMNVKHGSIERARYIFENMVQRDVVTWNVMIGGYSLH 544
Query: 307 GLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEH 366
G ++L +F M P+ VT VGVLSACS G V+EGR F + + P E
Sbjct: 545 GNAREALDLFDRMLKERFRPNSVTFVGVLSACSRAGFVEEGRRFFSYLLDGRGIVPTMEL 604
Query: 367 YACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLE 426
Y CMVDLLGRAG++++A LI MP +P++ IW +LL ACR + LD+AE AA++ L E
Sbjct: 605 YGCMVDLLGRAGELDEAELLINRMPLKPNSSIWSTLLAACRIYGNLDVAERAAERCLMSE 664
Query: 427 PKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVS 486
P + Y+ LS++YA+ G + +VA++RK M R V K GC+WIEVE K+H F D S
Sbjct: 665 PYDGAVYVQLSHMYAAAGMWENVAKVRKVMESRGVRKEQGCTWIEVEGKLHTFVVED-RS 723
Query: 487 HPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLP 546
HP+ I L ++ ++ GY P + VLH+V E+EK ++ YHSEKLA+AYG++ LP
Sbjct: 724 HPQAGEIYAELARLMTAIKREGYIPVTQNVLHNVGEQEKEEAISYHSEKLAIAYGVLSLP 783
Query: 547 EGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
G PIR+ KNLRVCGDCHSA K ISKV GREII RDA+RFHHFK+G+CSC DYW
Sbjct: 784 SGAPIRIFKNLRVCGDCHSASKFISKVTGREIIARDASRFHHFKNGVCSCGDYW 837
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 100/371 (26%), Positives = 183/371 (49%), Gaps = 19/371 (5%)
Query: 44 LGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWT 103
LG +RD I R+L ++ ++ + G + E R+ FD + K V++W
Sbjct: 79 LGKQVRDHIIQSGRQL-------NIYELNTLIKLHSICGNMLEARQTFDSVENKTVVTWN 131
Query: 104 TMISGYVNNNRIDVARKLF-EVMPEKNEVSWTAMLMGYTQCGRIQ--DAWELFKAMPMKS 160
+I+GY + A LF +++ E E S L+ C + F A +K
Sbjct: 132 AIIAGYAQLGHVKEAFALFRQMVDEAMEPSIITFLIVLDACSSPAGLKLGKEFHAQVIKV 191
Query: 161 VVASN-----SMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLF 215
S+ +++ + G + AR VFD + ++D +T++ MI Y + G + LF
Sbjct: 192 GFVSDFRIGTALVSMYVKGGSMDGARQVFDGLYKRDVSTFNVMIGGYAKSGDGEKAFQLF 251
Query: 216 TLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKC 275
MQ+EG + N S +S+L C++ +L G+ VHAQ + DV VA+ LI MY+ C
Sbjct: 252 YRMQQEGFKPNRISFLSILDGCSTPEALAWGKAVHAQCMNTGLVDDVRVATALIRMYMGC 311
Query: 276 GELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVL 335
G + + +FD +D+V W +I GYA+ E + +F M G+ PD +T + ++
Sbjct: 312 GSIEGARRVFDKMKVRDVVSWTVMIRGYAENSNIEDAFGLFATMQEEGIQPDRITYIHII 371
Query: 336 SACSYTGKVKEGREIF-ESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEP 394
+AC+ + + REI + +++ + + + +V + + G ++DA ++ +AM
Sbjct: 372 NACASSADLSLAREIHSQVVRAGFGTDLLVD--TALVHMYAKCGAIKDARQVFDAMS-RR 428
Query: 395 DAIIWGSLLGA 405
D + W +++GA
Sbjct: 429 DVVSWSAMIGA 439
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 86/325 (26%), Positives = 162/325 (49%), Gaps = 18/325 (5%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV----VSWTVMLGGFIRDSRIDDA 56
M R+VVSWT M+RGY E I +A LF M E+ + +++ ++ + + A
Sbjct: 324 MKVRDVVSWTVMIRGYAENSNIEDAFGLFATMQEEGIQPDRITYIHIINACASSADLSLA 383
Query: 57 RRLFDMMPE----KDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
R + + D++ T +V Y + G + + R++FD M +++V+SW+ MI YV N
Sbjct: 384 REIHSQVVRAGFGTDLLVDTALVHMYAKCGAIKDARQVFDAMSRRDVVSWSAMIGAYVEN 443
Query: 113 NRIDVARKLFEVMPEKN----EVSWTAMLMGYTQCGRIQDAWELF----KAMPMKSVVAS 164
+ A + F +M N V++ +L G + E++ KA + +
Sbjct: 444 GCGEEAFETFHLMKRNNVEPDVVTYINLLNACGHLGALDLGMEIYTQAIKADLVSHIPVG 503
Query: 165 NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVR 224
N++I ++G +++AR +F+ M ++D TW+ MI Y G E +DLF M KE R
Sbjct: 504 NALINMNVKHGSIERARYIFENMVQRDVVTWNVMIGGYSLHGNAREALDLFDRMLKERFR 563
Query: 225 VNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVY-VASVLITMYIKCGELVKGKL 283
N + + VLS C+ ++ GR+ + L+ + V + ++ + + GEL + +L
Sbjct: 564 PNSVTFVGVLSACSRAGFVEEGRRFFSYLLDGRGIVPTMELYGCMVDLLGRAGELDEAEL 623
Query: 284 IFDNFASK-DIVMWNSIISGYAQYG 307
+ + K + +W+++++ YG
Sbjct: 624 LINRMPLKPNSSIWSTLLAACRIYG 648
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 98/217 (45%), Gaps = 33/217 (15%)
Query: 225 VNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLI 284
++ + + + C L G+QV +++ +++Y + LI ++ CG +++ +
Sbjct: 59 IDSRTYVKLFQRCMMLRDAGLGKQVRDHIIQSGRQLNIYELNTLIKLHSICGNMLEARQT 118
Query: 285 FDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKV 344
FD+ +K +V WN+II+GYAQ G +++ +F +M + P +T + VL ACS +
Sbjct: 119 FDSVENKTVVTWNAIIAGYAQLGHVKEAFALFRQMVDEAMEPSIITFLIVLDACSSPAGL 178
Query: 345 KEGRE---------------IFESMKSKY---------------LVEPKTEHYACMVDLL 374
K G+E I ++ S Y L + + M+
Sbjct: 179 KLGKEFHAQVIKVGFVSDFRIGTALVSMYVKGGSMDGARQVFDGLYKRDVSTFNVMIGGY 238
Query: 375 GRAGQVEDAMKLIEAMP---FEPDAIIWGSLLGACRT 408
++G E A +L M F+P+ I + S+L C T
Sbjct: 239 AKSGDGEKAFQLFYRMQQEGFKPNRISFLSILDGCST 275
>gi|297739912|emb|CBI30094.3| unnamed protein product [Vitis vinifera]
Length = 614
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 216/520 (41%), Positives = 345/520 (66%), Gaps = 10/520 (1%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM-PEKNVVSWTVMLGGFIRDSRIDDARRL 59
M E +V++WT ++ GY++ GMI EA LF ++ +KNVV+WT M+GG+IR ++I DA +L
Sbjct: 93 MREPDVITWTTVISGYIKCGMIEEARRLFDRVDAKKNVVTWTAMVGGYIRSNKISDAEKL 152
Query: 60 FDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVAR 119
F+ MP K+VV+ M+ GY Q+GR+D +F++MP++NV+SW T++S RI+ AR
Sbjct: 153 FNEMPNKNVVSWNTMIDGYAQNGRIDSAMYLFEKMPERNVVSWNTVMSMLAQCGRIEEAR 212
Query: 120 KLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQK 179
+LF+ MPE++ +SWTAM+ G + +A +LF+ MP + + + N+MI GL QNG++++
Sbjct: 213 RLFDRMPERDVISWTAMIAGL-----LDEALDLFERMPERDLPSWNTMITGLIQNGDLRR 267
Query: 180 ARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFT-LMQKEGVRVNFPSLISVLSVCA 238
AR +F++M +K+ +W+ MI ++G E + +F+ ++ G + N + +SVL C+
Sbjct: 268 ARKLFNEMPKKNVISWTTMITGCVQEGESEEALKIFSRMLSTNGAKPNQGTFVSVLGACS 327
Query: 239 SLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDN--FASKDIVMW 296
+LA L G+QVH + + + +V S LI MY KCGEL + +FD+ + +D+V W
Sbjct: 328 NLAGLGEGQQVHQIISKTVYQDSTFVVSALINMYSKCGELGTARKMFDDGMTSQRDLVSW 387
Query: 297 NSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKS 356
N II+ YA +G G++++ F EM SG PDDVT VG+LSACS+ G V+EG + F+ +
Sbjct: 388 NGIIAAYAHHGYGKEAINFFKEMRKSGFKPDDVTYVGLLSACSHAGLVEEGLKYFDELVK 447
Query: 357 KYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAE 416
+ + +HYAC+VDL GRAG++++A IE + +P A +WG+LL C H + + +
Sbjct: 448 DRSILVREDHYACLVDLCGRAGRLKEAFGFIERLETKPSARVWGALLAGCNVHANVKIGK 507
Query: 417 VAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKV 476
AAKKLL++EP+NAG Y+LLSNIYAS G++ + A +R M+ + + K PGCSWIEV +V
Sbjct: 508 QAAKKLLEVEPENAGTYLLLSNIYASTGKWREAARVRLKMKDKGLKKQPGCSWIEVGNRV 567
Query: 477 HMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFV 516
H+F D SH + +I +L + +++AGY P++ F+
Sbjct: 568 HVFVVGD-KSHSQSKLIYSLLRDLHSKMKKAGYEPNNDFI 606
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 116/373 (31%), Positives = 204/373 (54%), Gaps = 23/373 (6%)
Query: 46 GFIRDSRIDDARRLFDMMPEKDVVAQTN------MVLGYCQDGRVDEGREIFDEMPKKNV 99
GF I+D R +P KD N M+ +DGR+ E R +FDEM + +V
Sbjct: 39 GFYLYHSINDYRTAKISIPRKDFTVDGNVARCNWMITNLSKDGRIMEARRLFDEMREPDV 98
Query: 100 ISWTTMISGYVNNNRIDVARKLFE-VMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPM 158
I+WTT+ISGY+ I+ AR+LF+ V +KN V+WTAM+ GY + +I DA +LF MP
Sbjct: 99 ITWTTVISGYIKCGMIEEARRLFDRVDAKKNVVTWTAMVGGYIRSNKISDAEKLFNEMPN 158
Query: 159 KSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLM 218
K+VV+ N+MI G QNG + A +F++M E++ +W+ ++ + + G E LF M
Sbjct: 159 KNVVSWNTMIDGYAQNGRIDSAMYLFEKMPERNVVSWNTVMSMLAQCGRIEEARRLFDRM 218
Query: 219 QKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGEL 278
+ V +++ ++I+ L LD + ++ + D+ + +IT I+ G+L
Sbjct: 219 PERDV-ISWTAMIAGL--------LDEALDLFERMP----ERDLPSWNTMITGLIQNGDL 265
Query: 279 VKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSS-GVMPDDVTLVGVLSA 337
+ + +F+ K+++ W ++I+G Q G E++LK+F M S+ G P+ T V VL A
Sbjct: 266 RRARKLFNEMPKKNVISWTTMITGCVQEGESEEALKIFSRMLSTNGAKPNQGTFVSVLGA 325
Query: 338 CSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLI-EAMPFEPDA 396
CS + EG+++ + + SK + + T + ++++ + G++ A K+ + M + D
Sbjct: 326 CSNLAGLGEGQQVHQII-SKTVYQDSTFVVSALINMYSKCGELGTARKMFDDGMTSQRDL 384
Query: 397 IIWGSLLGACRTH 409
+ W ++ A H
Sbjct: 385 VSWNGIIAAYAHH 397
>gi|297798898|ref|XP_002867333.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313169|gb|EFH43592.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 792
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 225/614 (36%), Positives = 359/614 (58%), Gaps = 15/614 (2%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV--VSWTVMLGGFIRDSRIDDAR- 57
MPE++ + W M+ GY + M E+ +F + ++ + T +L + + + R
Sbjct: 180 MPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRL 239
Query: 58 --RLFDMMPEKDVVAQTNMVLG----YCQDGRVDEGREIFDEMPKKNVISWTTMISGYVN 111
++ + + + ++ G Y + G++ +F E + +++++ MI GY +
Sbjct: 240 GMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMASTLFREFRRPDIVAYNAMIHGYTS 299
Query: 112 NNRIDVARKLF-EVMPEKNEVSWTAMLMGYTQCGRIQDAWEL----FKAMPMKSVVASNS 166
N +++ LF E+M ++ + ++ G + + + K+ + S +
Sbjct: 300 NGETELSLSLFKELMLSGAKLKSSTLVSLVPVSGHLMLIYAIHGYSLKSNFLSHTSVSTA 359
Query: 167 MILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVN 226
+ + E++ AR +FD+ EK +W+ MI Y + G + I LF MQ N
Sbjct: 360 LTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQNSEFSPN 419
Query: 227 FPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFD 286
++ +LS CA L +L G+ VH + F+ +YV++ LI MY KCG + + + +FD
Sbjct: 420 PVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFD 479
Query: 287 NFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKE 346
K+ V WN++ISGY +G G+++L +F EM +SG+ P VT + VL ACS+ G VKE
Sbjct: 480 FMPKKNEVTWNTMISGYGLHGHGQEALTIFSEMLNSGIAPTPVTFLCVLYACSHAGLVKE 539
Query: 347 GREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGAC 406
G EIF SM +Y EP +HYAC+VD+LGRAG ++ A++ IEAMP +P +W +LLGAC
Sbjct: 540 GDEIFNSMIHRYGFEPSVKHYACVVDILGRAGHLQRALQFIEAMPIQPGPSVWETLLGAC 599
Query: 407 RTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPG 466
R H +LA ++KL +L+P N G ++LLSNI+++ + A +R+ +KR + K PG
Sbjct: 600 RIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPG 659
Query: 467 CSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKV 526
+ IE+ + H+FT D SHP+ I LEK+ G +REAGY P++ LHDV+EEE+
Sbjct: 660 YTLIEIGETPHVFTSGD-QSHPQVKAIHEKLEKLEGKMREAGYQPETELALHDVEEEERE 718
Query: 527 HSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRF 586
++ HSE+LA+A+GL+ G IR++KNLRVC DCH+A KLISK+ R I++RDANRF
Sbjct: 719 LMVKVHSERLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKLISKITERVIVVRDANRF 778
Query: 587 HHFKDGLCSCRDYW 600
HHFKDG+CSC DYW
Sbjct: 779 HHFKDGVCSCGDYW 792
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 97/421 (23%), Positives = 181/421 (42%), Gaps = 82/421 (19%)
Query: 33 PEKNVVSWTVMLGGFIRDSR---IDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGRE 89
P + ++ + RD R + + + D + +++ +N+V Y + RV++ R+
Sbjct: 117 PNSSTYAFAISAASGFRDDRAGCVIHGQAIVDGC-DSELLLGSNIVKMYFKFWRVEDARK 175
Query: 90 IFDEMPKKNVISWTTMISGYVNN------------------NRIDVARKLFEVMPEKNEV 131
+FD MP+K+ I W TMISGY N R+D L +++P E+
Sbjct: 176 VFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTT-TLLDILPAVAEL 234
Query: 132 S-----------------------WTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMI 168
T + Y++CG+I+ A LF+ +VA N+MI
Sbjct: 235 QELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMASTLFREFRRPDIVAYNAMI 294
Query: 169 LGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFP 228
G NGE + + + LF + G ++
Sbjct: 295 HGYTSNGETELS-------------------------------LSLFKELMLSGAKLKSS 323
Query: 229 SLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNF 288
+L+S++ V L + +H ++ F V++ L T+Y K E+ + +FD
Sbjct: 324 TLVSLVPVSGHLMLI---YAIHGYSLKSNFLSHTSVSTALTTVYSKLNEIESARKLFDES 380
Query: 289 ASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGR 348
K + WN++ISGY Q GL E ++ +F EM +S P+ VT+ +LSAC+ G + G+
Sbjct: 381 PEKSLPSWNAMISGYTQNGLTEDAISLFREMQNSEFSPNPVTITCILSACAQLGALSLGK 440
Query: 349 EIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRT 408
+ + ++S E ++ + + G + +A +L + MP + + + W +++
Sbjct: 441 WVHDLVRSTDF-ESSIYVSTALIGMYAKCGSIAEARRLFDFMP-KKNEVTWNTMISGYGL 498
Query: 409 H 409
H
Sbjct: 499 H 499
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/298 (19%), Positives = 124/298 (41%), Gaps = 34/298 (11%)
Query: 128 KNEVSW-TAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQ 186
+N++S T + + G I A ++F ++ V N ++ G N + VF
Sbjct: 49 RNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLAVFAH 108
Query: 187 MREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHG 246
+R+ D ++ N + +S + G
Sbjct: 109 LRKSTD------------------------------LKPNSSTYAFAISAASGFRDDRAG 138
Query: 247 RQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQY 306
+H Q + D ++ + S ++ MY K + + +FD KD ++WN++ISGY +
Sbjct: 139 CVIHGQAIVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKN 198
Query: 307 GLGEKSLKVFHEMFS-SGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTE 365
+ +S++VF ++ + S D TL+ +L A + +++ G +I S+ +K
Sbjct: 199 EMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQI-HSLATKTGCYSHDY 257
Query: 366 HYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLL 423
+ L + G+++ A L PD + + +++ ++ + +L+ K+L+
Sbjct: 258 VLTGFISLYSKCGKIKMASTLFREFR-RPDIVAYNAMIHGYTSNGETELSLSLFKELM 314
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 79/173 (45%), Gaps = 13/173 (7%)
Query: 241 ASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSII 300
S+ H Q HAQ+V F D+ + + L G + + IF + D+ ++N ++
Sbjct: 31 TSISHLAQTHAQIVLHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLM 90
Query: 301 SGYAQYGLGEKSLKVF-HEMFSSGVMPDDVTLVGVLSACS-----YTGKVKEGREIFESM 354
G++ SL VF H S+ + P+ T +SA S G V G+ I +
Sbjct: 91 RGFSVNESPHSSLAVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGCVIHGQAIVDGC 150
Query: 355 KSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACR 407
S+ L+ +V + + +VEDA K+ + MP E D I+W +++ R
Sbjct: 151 DSELLLGSN------IVKMYFKFWRVEDARKVFDRMP-EKDTILWNTMISGYR 196
>gi|449468888|ref|XP_004152153.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Cucumis sativus]
gi|449515059|ref|XP_004164567.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Cucumis sativus]
Length = 721
Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust.
Identities = 234/616 (37%), Positives = 371/616 (60%), Gaps = 17/616 (2%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMP----EKNVVSWTVMLGGFIRDSRIDDA 56
+ +++VSWT M+ Y E +EA F QM + N ++ +L + D
Sbjct: 107 ISSKDMVSWTGMIASYAENDCFSEALEFFSQMRVAGFKPNNFTFAGVLKACLGLQNFDAG 166
Query: 57 R----RLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+ + E+D+ ++ Y + G D+ F +MPK +VI W+ MIS + +
Sbjct: 167 KTVHCSVLKTNYERDLYVGVGLLELYTRCGDNDDAWRAFGDMPKNDVIPWSFMISRFAQS 226
Query: 113 NRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWEL----FKAMPMKSVVAS 164
+ + A ++F M N+ +++++L + + + KA V S
Sbjct: 227 GQSEKALEIFCQMRRAFVIPNQFTFSSVLQASADIESLDLSKTIHGHALKAGLSTDVFVS 286
Query: 165 NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVR 224
N+++ + G ++++ +F+ + +++D +W+ +I Y + G + LF+ M + V+
Sbjct: 287 NALMACYAKCGCIEQSMELFEALSDRNDVSWNTIIVSYVQLGDGERALSLFSNMLRYQVQ 346
Query: 225 VNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLI 284
+ S+L CA+LA+L+ G QVH + + DV V + LI MY KCG + + +
Sbjct: 347 ATEVTYSSILRACATLAALELGLQVHCLTAKTIYGQDVAVGNALIDMYAKCGSIKDARFM 406
Query: 285 FDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKV 344
FD +D V WN+II GY+ +GLG +++K+F+ M + PD++T VGVLSACS TG++
Sbjct: 407 FDMLDLRDKVSWNAIICGYSMHGLGVEAIKMFNLMKETKCKPDELTFVGVLSACSNTGRL 466
Query: 345 KEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLG 404
EG++ F SMK Y +EP EHY CMV L+GR+G ++ A+K IE +PFEP +IW +LLG
Sbjct: 467 DEGKQYFTSMKQDYGIEPCMEHYTCMVWLMGRSGNLDQAVKFIEDIPFEPSVMIWRALLG 526
Query: 405 ACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKP 464
AC H ++L ++A+++L+LEP++ ++LLSNIYA R+ +VA +RK+M+++ V K
Sbjct: 527 ACVIHNDVELGRISAQRVLELEPRDEASHVLLSNIYARARRWGNVAYVRKHMKRKGVKKE 586
Query: 465 PGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEE 524
PG SWIE + VH FT D SH + +I MLE + R+AGY P + VL DV+++E
Sbjct: 587 PGLSWIENQGNVHCFTVAD-TSHADLKLINGMLEFLNMKTRKAGYSPQLNAVLLDVEDDE 645
Query: 525 KVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDAN 584
K L HSE+LA+A+GLV++P G PIR++KNLR+C DCHS IKLISK++GR+II+RD N
Sbjct: 646 KERLLWLHSERLALAFGLVRMPAGCPIRIIKNLRICVDCHSVIKLISKIVGRDIIVRDMN 705
Query: 585 RFHHFKDGLCSCRDYW 600
RFHHF++G CSC DYW
Sbjct: 706 RFHHFENGSCSCADYW 721
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 108/456 (23%), Positives = 188/456 (41%), Gaps = 80/456 (17%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMP----EKNVVSWTVMLGGFIRDSRIDDA 56
MPERN VS+ ++ GY + EA LF ++ E N +T +L + +
Sbjct: 6 MPERNTVSFVTLIHGYAQSNKFIEAFELFARLHGEGHELNPFVFTTVLKLLVSMEWAELG 65
Query: 57 RRLFDMMPE----KDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
R + + + + T ++ Y G V RE+FDE+ K+++SWT MI+ Y N
Sbjct: 66 RIVHGCVLKVGYGSNTFIGTALIDAYSVSGCVSMAREVFDEISSKDMVSWTGMIASYAEN 125
Query: 113 NRIDVARKLFEVMP----EKNEVSWTAMLMG----------------------------- 139
+ A + F M + N ++ +L
Sbjct: 126 DCFSEALEFFSQMRVAGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTNYERDLYVG 185
Query: 140 ------YTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDA 193
YT+CG DAW F MP V+ + MI Q+G+ +KA +F QMR
Sbjct: 186 VGLLELYTRCGDNDDAWRAFGDMPKNDVIPWSFMISRFAQSGQSEKALEIFCQMR----- 240
Query: 194 TWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQL 253
+ V N + SVL A + SLD + +H
Sbjct: 241 --------------------------RAFVIPNQFTFSSVLQASADIESLDLSKTIHGHA 274
Query: 254 VRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSL 313
++ DV+V++ L+ Y KCG + + +F+ + ++ V WN+II Y Q G GE++L
Sbjct: 275 LKAGLSTDVFVSNALMACYAKCGCIEQSMELFEALSDRNDVSWNTIIVSYVQLGDGERAL 334
Query: 314 KVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDL 373
+F M V +VT +L AC+ ++ G ++ + +K + ++D+
Sbjct: 335 SLFSNMLRYQVQATEVTYSSILRACATLAALELGLQV-HCLTAKTIYGQDVAVGNALIDM 393
Query: 374 LGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTH 409
+ G ++DA + + + D + W +++ H
Sbjct: 394 YAKCGSIKDARFMFDMLDLR-DKVSWNAIICGYSMH 428
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 89/328 (27%), Positives = 159/328 (48%), Gaps = 22/328 (6%)
Query: 90 IFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMP----EKNEVSWTAML-----MGY 140
+FDEMP++N +S+ T+I GY +N+ A +LF + E N +T +L M +
Sbjct: 2 VFDEMPERNTVSFVTLIHGYAQSNKFIEAFELFARLHGEGHELNPFVFTTVLKLLVSMEW 61
Query: 141 TQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIK 200
+ GRI L + + + ++I +G V AR VFD++ KD +W+GMI
Sbjct: 62 AELGRIVHGCVLKVGYGSNTFIGT-ALIDAYSVSGCVSMAREVFDEISSKDMVSWTGMIA 120
Query: 201 VYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDV 260
Y E ++ F+ M+ G + N + VL C L + D G+ VH +++ ++
Sbjct: 121 SYAENDCFSEALEFFSQMRVAGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTNYER 180
Query: 261 DVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMF 320
D+YV L+ +Y +CG+ F + D++ W+ +IS +AQ G EK+L++F +M
Sbjct: 181 DLYVGVGLLELYTRCGDNDDAWRAFGDMPKNDVIPWSFMISRFAQSGQSEKALEIFCQMR 240
Query: 321 SSGVMPDDVTLVGVLSACSYT-----GKVKEGREIFESMKSKYLVEPKTEHYACMVDLLG 375
+ V+P+ T VL A + K G + + + V ++
Sbjct: 241 RAFVIPNQFTFSSVLQASADIESLDLSKTIHGHALKAGLSTDVFVSNA------LMACYA 294
Query: 376 RAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
+ G +E +M+L EA+ D + W +++
Sbjct: 295 KCGCIEQSMELFEALSDRND-VSWNTII 321
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 111/223 (49%), Gaps = 4/223 (1%)
Query: 182 VVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLA 241
+VFD+M E++ ++ +I Y + +E +LF + EG +N +VL + S+
Sbjct: 1 MVFDEMPERNTVSFVTLIHGYAQSNKFIEAFELFARLHGEGHELNPFVFTTVLKLLVSME 60
Query: 242 SLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIIS 301
+ GR VH +++ + + ++ + LI Y G + + +FD +SKD+V W +I+
Sbjct: 61 WAELGRIVHGCVLKVGYGSNTFIGTALIDAYSVSGCVSMAREVFDEISSKDMVSWTGMIA 120
Query: 302 GYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFES-MKSKYLV 360
YA+ ++L+ F +M +G P++ T GVL AC G+ + S +K+ Y
Sbjct: 121 SYAENDCFSEALEFFSQMRVAGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTNY-- 178
Query: 361 EPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
E +++L R G +DA + MP + D I W ++
Sbjct: 179 ERDLYVGVGLLELYTRCGDNDDAWRAFGDMP-KNDVIPWSFMI 220
>gi|449479821|ref|XP_004155717.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 745
Score = 447 bits (1149), Expect = e-122, Method: Compositional matrix adjust.
Identities = 244/651 (37%), Positives = 370/651 (56%), Gaps = 82/651 (12%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRL----- 59
+V A++ Y + G + A +F QMPE++VVSWT MLG ++R +A RL
Sbjct: 122 DVFVCNALMNMYEKCGCLVSARLVFDQMPERDVVSWTTMLGCYVRSKAFGEALRLVREMQ 181
Query: 60 ---------------------FDMMPEK---------------DVVAQTNMVLGYCQDGR 83
DM + +V T ++ YC+ G
Sbjct: 182 FVGVKLSGVALISLIAVFGNLLDMKSGRAVHGYIVRNVGDEKMEVSMTTALIDMYCKGGC 241
Query: 84 VDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEK----NEVSWTAMLMG 139
+ + +FD + K++V+SWT MI+G + + R+D K F M E+ NE++ +++
Sbjct: 242 LASAQRLFDRLSKRSVVSWTVMIAGCIRSCRLDEGAKNFNRMLEEKLFPNEITLLSLI-- 299
Query: 140 YTQCGRIQ--DAWELFKAMPMK-----SVVASNSMILGLGQNGEVQKARVVFDQMREKDD 192
T+CG + D + F A ++ S+ ++I G+ G+V AR +F+ +++KD
Sbjct: 300 -TECGFVGTLDLGKWFHAYLLRNGFGMSLALVTALIDMYGKCGQVGYARALFNGVKKKDV 358
Query: 193 ATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQ 252
WS +I Y +V +LF M V+ N +++S+LS+CA +LD G+ HA
Sbjct: 359 KIWSVLISAYAHVSCMDQVFNLFVEMLNNDVKPNNVTMVSLLSLCAEAGALDLGKWTHAY 418
Query: 253 LVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKS 312
+ R +VDV + + LI MY KCG++ + +F+ +DI MWN++++G++ +G G+++
Sbjct: 419 INRHGLEVDVILETALINMYAKCGDVTIARSLFNEAMQRDIRMWNTMMAGFSMHGCGKEA 478
Query: 313 LKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVD 372
L++F EM S GV P+D+T V + ACS++G + EHY C+VD
Sbjct: 479 LELFSEMESHGVEPNDITFVSIFHACSHSGLM--------------------EHYGCLVD 518
Query: 373 LLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGP 432
LLGRAG +++A +IE MP P+ IIWG+LL AC+ H L L EVAA+K+L+L+P+N G
Sbjct: 519 LLGRAGHLDEAHNIIENMPMRPNTIIWGALLAACKLHKNLALGEVAARKILELDPQNCGY 578
Query: 433 YILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRD--CVSHPE- 489
+L SNIYAS R++DV +R+ M + K PG SWIEV VH F D C +
Sbjct: 579 SVLKSNIYASAKRWNDVTSVREAMSHSGMKKEPGLSWIEVSGSVHHFKSGDKACTQTTKV 638
Query: 490 HPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGV 549
+ M+ M K LRE+GY P+++ VL ++DEEEK +L YHSEKLA A+GL+ G
Sbjct: 639 YEMVTEMCIK----LRESGYTPNTAAVLLNIDEEEKESALSYHSEKLATAFGLISTAPGT 694
Query: 550 PIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
PIR++KNLR+C DCH+A KL+SK+ GR II+RD NRFHHF +G CSC YW
Sbjct: 695 PIRIVKNLRICDDCHAATKLLSKIYGRTIIVRDRNRFHHFSEGYCSCMGYW 745
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 108/244 (44%), Gaps = 5/244 (2%)
Query: 184 FDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRV--NFPSLISVLSVCASLA 241
F Q +A ++ +I Y + + M+ NF L S+L CA +
Sbjct: 44 FSQSHFTPEANYNLLISSYTNNHLPQASFNCYLHMRSNDAAALDNFI-LPSLLKACAQAS 102
Query: 242 SLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIIS 301
S D GR++H + F DV+V + L+ MY KCG LV +L+FD +D+V W +++
Sbjct: 103 SGDLGRELHGFAQKNGFASDVFVCNALMNMYEKCGCLVSARLVFDQMPERDVVSWTTMLG 162
Query: 302 GYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVE 361
Y + ++L++ EM GV V L+ +++ +K GR + + E
Sbjct: 163 CYVRSKAFGEALRLVREMQFVGVKLSGVALISLIAVFGNLLDMKSGRAVHGYIVRNVGDE 222
Query: 362 P-KTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAK 420
+ ++D+ + G + A +L + + + + W ++ C +LD
Sbjct: 223 KMEVSMTTALIDMYCKGGCLASAQRLFDRLS-KRSVVSWTVMIAGCIRSCRLDEGAKNFN 281
Query: 421 KLLQ 424
++L+
Sbjct: 282 RMLE 285
>gi|413944960|gb|AFW77609.1| hypothetical protein ZEAMMB73_798524 [Zea mays]
Length = 665
Score = 446 bits (1148), Expect = e-122, Method: Compositional matrix adjust.
Identities = 243/612 (39%), Positives = 345/612 (56%), Gaps = 58/612 (9%)
Query: 43 MLGGFIRDSRIDDARRLFDMMP--EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKK--- 97
+L ++R +AR LFD MP ++ VV + +V + G + + +EM +
Sbjct: 58 LLHAYLRLGTTGNARALFDGMPRPQRTVVGWSALVAAHAARGDAEGAWRLLEEMRRDGGV 117
Query: 98 --NVISWTTMISGYVNNNRIDVARKLFEVM-------PEKNEVSW--------------- 133
NVI+W ++SG + R A M P+ VS
Sbjct: 118 EPNVITWNGLVSGLNRSGRARDAVVALATMHGEGLLRPDATGVSCALSAVGDVGLVSVGQ 177
Query: 134 ------------------TAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNG 175
TA++ Y +CG+ + +F V + N++I GL +N
Sbjct: 178 QLHGYAVKAGCRADACVVTALIDMYGKCGQAAEVVRVFDESSHMDVASCNALIAGLSRNA 237
Query: 176 EVQKARVVF----DQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLI 231
+V +A +F D+ E + +W+ ++ + G +LE ++ F MQ +G N ++
Sbjct: 238 QVCEALRLFKEFVDRGVELNVVSWTSIVACCVQNGKDLEAVEFFREMQAQGTEPNSVTIP 297
Query: 232 SVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASK 291
VL A++A+L HGR H +R F DVYV+S L+ MY KCG + ++IFD S+
Sbjct: 298 CVLPAFANVAALMHGRSAHCFALRKGFLHDVYVSSALVDMYAKCGRVKDARIIFDTMVSR 357
Query: 292 DIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIF 351
++V WN++I GYA YG ++ +FH M PD VT +L+AC+ G +EGR F
Sbjct: 358 NVVSWNAMIGGYAMYGEAVNAVWMFHSMLKCKQKPDMVTFTCLLAACTQAGLTEEGRHYF 417
Query: 352 ESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMK 411
+ M ++Y V P+ EHYACMV LLGRAG++++A LI MPFEPDA IWGSLLG+CR H
Sbjct: 418 KEMHNEYGVSPRMEHYACMVTLLGRAGKLDEAYDLISDMPFEPDAYIWGSLLGSCRVHGN 477
Query: 412 LDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIE 471
+DLAEVAA+KL LEP+NAG Y+LLSNIYAS+ + V +R+ M+ + K GCSWIE
Sbjct: 478 VDLAEVAAEKLFHLEPENAGNYVLLSNIYASKKMWDRVNRVREMMKDVGLKKEKGCSWIE 537
Query: 472 VEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGL---LREAGYCPDSSFVLHDVDEEEKVHS 528
++ KVHM D HPM+ ++EKI L +R+ G+ P + FVLHDV+E+EK
Sbjct: 538 IKNKVHMLLAGD----DSHPMMTAIIEKINQLNIQMRKLGFVPSTDFVLHDVEEQEKDDI 593
Query: 529 LRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHH 588
L HSEKLAVA GL+ G +RV+KNLR+CGDCH A+K IS GREI +RD NRFHH
Sbjct: 594 LAVHSEKLAVALGLISTSPGTTLRVIKNLRICGDCHEAMKFISSFEGREISVRDTNRFHH 653
Query: 589 FKDGLCSCRDYW 600
F G CSC D+W
Sbjct: 654 FSGGKCSCGDFW 665
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 70/315 (22%), Positives = 136/315 (43%), Gaps = 45/315 (14%)
Query: 134 TAMLMGYTQCGRIQDAWELFKAMP--MKSVVASNSMILGLGQNGEVQKARVVFDQMR--- 188
+++L Y + G +A LF MP ++VV ++++ G+ + A + ++MR
Sbjct: 56 SSLLHAYLRLGTTGNARALFDGMPRPQRTVVGWSALVAAHAARGDAEGAWRLLEEMRRDG 115
Query: 189 --EKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGV-RVNFPSLISVLSVCASLASLDH 245
E + TW+G++ R G + + M EG+ R + + LS + +
Sbjct: 116 GVEPNVITWNGLVSGLNRSGRARDAVVALATMHGEGLLRPDATGVSCALSAVGDVGLVSV 175
Query: 246 GRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQ 305
G+Q+H V+ D V + LI MY KCG+ + +FD + D+ N++I+G ++
Sbjct: 176 GQQLHGYAVKAGCRADACVVTALIDMYGKCGQAAEVVRVFDESSHMDVASCNALIAGLSR 235
Query: 306 YGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTE 365
++L++F E GV + V+ +++ C GK E E F M+++ EP +
Sbjct: 236 NAQVCEALRLFKEFVDRGVELNVVSWTSIVACCVQNGKDLEAVEFFREMQAQG-TEPNSV 294
Query: 366 HYAC-----------------------------------MVDLLGRAGQVEDAMKLIEAM 390
C +VD+ + G+V+DA + + M
Sbjct: 295 TIPCVLPAFANVAALMHGRSAHCFALRKGFLHDVYVSSALVDMYAKCGRVKDARIIFDTM 354
Query: 391 PFEPDAIIWGSLLGA 405
+ + W +++G
Sbjct: 355 -VSRNVVSWNAMIGG 368
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 86/411 (20%), Positives = 156/411 (37%), Gaps = 96/411 (23%)
Query: 2 PERNVVSWTAMVRGYVEEGMITEAGTLFWQMP-----EKNVVSWTVMLGGFIRDSRIDDA 56
P+R VV W+A+V + G A L +M E NV++W ++ G R R DA
Sbjct: 81 PQRTVVGWSALVAAHAARGDAEGAWRLLEEMRRDGGVEPNVITWNGLVSGLNRSGRARDA 140
Query: 57 RRLFDMM-------PEK---------------------------------DVVAQTNMVL 76
M P+ D T ++
Sbjct: 141 VVALATMHGEGLLRPDATGVSCALSAVGDVGLVSVGQQLHGYAVKAGCRADACVVTALID 200
Query: 77 GYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEK----NEVS 132
Y + G+ E +FDE +V S +I+G N ++ A +LF+ ++ N VS
Sbjct: 201 MYGKCGQAAEVVRVFDESSHMDVASCNALIAGLSRNAQVCEALRLFKEFVDRGVELNVVS 260
Query: 133 WTAMLMGYTQCGRIQDAWELFKAMP----------------------------------- 157
WT+++ Q G+ +A E F+ M
Sbjct: 261 WTSIVACCVQNGKDLEAVEFFREMQAQGTEPNSVTIPCVLPAFANVAALMHGRSAHCFAL 320
Query: 158 ----MKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVID 213
+ V S++++ + G V+ AR++FD M ++ +W+ MI Y G + +
Sbjct: 321 RKGFLHDVYVSSALVDMYAKCGRVKDARIIFDTMVSRNVVSWNAMIGGYAMYGEAVNAVW 380
Query: 214 LFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVA--SVLITM 271
+F M K + + + +L+ C + GR ++ ++ V + + ++T+
Sbjct: 381 MFHSMLKCKQKPDMVTFTCLLAACTQAGLTEEGRHYFKEM-HNEYGVSPRMEHYACMVTL 439
Query: 272 YIKCGELVKG-KLIFDNFASKDIVMWNSIISGYAQYG---LGE-KSLKVFH 317
+ G+L + LI D D +W S++ +G L E + K+FH
Sbjct: 440 LGRAGKLDEAYDLISDMPFEPDAYIWGSLLGSCRVHGNVDLAEVAAEKLFH 490
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 78/166 (46%), Gaps = 4/166 (2%)
Query: 225 VNFPSLISVL-SVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKL 283
V+FP +L + S +L R +HA D +VAS L+ Y++ G +
Sbjct: 14 VSFPPDPHLLPTAFKSCPTLPLARALHAVAEVSGLARDPFVASSLLHAYLRLGTTGNARA 73
Query: 284 IFDNF--ASKDIVMWNSIISGYAQYGLGEKSLKVFHEM-FSSGVMPDDVTLVGVLSACSY 340
+FD + +V W+++++ +A G E + ++ EM GV P+ +T G++S +
Sbjct: 74 LFDGMPRPQRTVVGWSALVAAHAARGDAEGAWRLLEEMRRDGGVEPNVITWNGLVSGLNR 133
Query: 341 TGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKL 386
+G+ ++ +M + L+ P +C + +G G V +L
Sbjct: 134 SGRARDAVVALATMHGEGLLRPDATGVSCALSAVGDVGLVSVGQQL 179
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 66/144 (45%), Gaps = 18/144 (12%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM----PEKNVVSWTVMLGGFIRDSRIDDA 56
M RNVVSW AM+ GY G A +F M + ++V++T +L + ++
Sbjct: 354 MVSRNVVSWNAMIGGYAMYGEAVNAVWMFHSMLKCKQKPDMVTFTCLLAACTQAGLTEEG 413
Query: 57 RRLFDMM-------PEKDVVAQTNMVLGYCQDGRVDEGREIFDEMP-KKNVISWTTMISG 108
R F M P + A +LG + G++DE ++ +MP + + W +++
Sbjct: 414 RHYFKEMHNEYGVSPRMEHYACMVTLLG--RAGKLDEAYDLISDMPFEPDAYIWGSLLGS 471
Query: 109 YVNNNRIDV----ARKLFEVMPEK 128
+ +D+ A KLF + PE
Sbjct: 472 CRVHGNVDLAEVAAEKLFHLEPEN 495
>gi|296082284|emb|CBI21289.3| unnamed protein product [Vitis vinifera]
Length = 581
Score = 446 bits (1148), Expect = e-122, Method: Compositional matrix adjust.
Identities = 211/468 (45%), Positives = 315/468 (67%), Gaps = 2/468 (0%)
Query: 134 TAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDA 193
+A++ Y++CG ++DA LF + +++V+ SMI G QN + +A VFD M E+D
Sbjct: 115 SALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQNDDAHRALRVFDGMAERDVI 174
Query: 194 TWSGMIKVYERKGYELEVIDLFTLMQKEG-VRVNFPSLISVLSVCASLASLDHGRQVHAQ 252
+W+ +I VY + G E +++F M K+G + N +L +VL CA S G+ +H Q
Sbjct: 175 SWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQ 234
Query: 253 LVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKS 312
+++ + +V+V + +I MY KCG++ + FD K++ W+++++GY +G +++
Sbjct: 235 VIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEA 294
Query: 313 LKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVD 372
L+VF+EM +GV P+ +T V VL+ACS+ G ++EG F++M ++ VEP EHY CMVD
Sbjct: 295 LEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPGVEHYGCMVD 354
Query: 373 LLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGP 432
LLGRAG +++A LI+ M PD ++WG+LLGACR H +DL E++A+KL +L+PKN G
Sbjct: 355 LLGRAGYLKEAFDLIKGMKLRPDFVVWGALLGACRMHKNVDLGEISARKLFELDPKNCGY 414
Query: 433 YILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPM 492
Y+LLSNIYA GR+ DV +R M+ ++KPPG S ++++ +VH+F D HP+H
Sbjct: 415 YVLLSNIYADAGRWEDVERMRILMKNSGLVKPPGFSLVDIKGRVHVFLVGD-REHPQHEK 473
Query: 493 IMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIR 552
I LEK+ L+E GY PD + VLHDV EEK LR HSEKLAVA+G++ G I
Sbjct: 474 IYEYLEKLSMKLQEVGYVPDMTSVLHDVGHEEKEMVLRVHSEKLAVAFGIMNTVPGTTIH 533
Query: 553 VMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
++KNLRVCGDCH+AIK ISK++ REI++RD+ RFHHF+DGLCSC DYW
Sbjct: 534 IIKNLRVCGDCHTAIKFISKIVDREIVVRDSKRFHHFRDGLCSCGDYW 581
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 91/369 (24%), Positives = 161/369 (43%), Gaps = 55/369 (14%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQM------PEKNVVSWTVMLGGFIRD--SRIDDA 56
NV SW +++ G EA F M P ++ + + D S
Sbjct: 40 NVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSGRQAH 99
Query: 57 RRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRID 116
++ E D+ + +V Y + G + + R +FDE+ +N++SWT+MI+GYV N+
Sbjct: 100 QQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQNDDAH 159
Query: 117 VARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMIL------- 169
A ++F+ M E++ +SW +++ Y Q G ++ E+F M + N++ L
Sbjct: 160 RALRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLAC 219
Query: 170 -------------------GLGQN--------------GEVQKARVVFDQMREKDDATWS 196
GL N G+V+ AR FD+MREK+ +WS
Sbjct: 220 AHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWS 279
Query: 197 GMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRC 256
M+ Y G+ E +++F M GV+ N+ + +SVL+ C+ L+ G +
Sbjct: 280 AMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEGWHWFKAMSH- 338
Query: 257 QFDVDVYVA--SVLITMYIKCGELVKG-KLIFDNFASKDIVMWNSIISG---YAQYGLGE 310
+FDV+ V ++ + + G L + LI D V+W +++ + LGE
Sbjct: 339 EFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALLGACRMHKNVDLGE 398
Query: 311 KSLKVFHEM 319
S + E+
Sbjct: 399 ISARKLFEL 407
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 126/261 (48%), Gaps = 35/261 (13%)
Query: 182 VVFDQMREKDDA-TWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASL 240
+F++ +K + +W+ +I R G +E + F+ M+K ++ N + + C++L
Sbjct: 30 TLFNKYVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSAL 89
Query: 241 ASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKL----------------- 283
L GRQ H Q + F+ D++V+S L+ MY KCGEL +
Sbjct: 90 LDLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMI 149
Query: 284 --------------IFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSG-VMPDD 328
+FD A +D++ WNSII+ YAQ G+ +S+++FH M G + +
Sbjct: 150 TGYVQNDDAHRALRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNA 209
Query: 329 VTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIE 388
VTL VL AC+++G + G+ I + + K +E ++D+ + G+VE A K +
Sbjct: 210 VTLSAVLLACAHSGSQRLGKCIHDQV-IKMGLESNVFVGTSIIDMYCKCGKVEMARKAFD 268
Query: 389 AMPFEPDAIIWGSLLGACRTH 409
M E + W +++ H
Sbjct: 269 RMR-EKNVKSWSAMVAGYGMH 288
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 109/218 (50%), Gaps = 19/218 (8%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWT-VMLGGFIRDSRIDDARRL 59
M ER+V+SW +++ Y + GM TE+ +F +M + +++ V L + ++RL
Sbjct: 168 MAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRL 227
Query: 60 --------FDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVN 111
M E +V T+++ YC+ G+V+ R+ FD M +KNV SW+ M++GY
Sbjct: 228 GKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGM 287
Query: 112 NNRIDVARKLFEVMP----EKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMK-----SVV 162
+ A ++F M + N +++ ++L + G +++ W FKAM + V
Sbjct: 288 HGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPGVE 347
Query: 163 ASNSMILGLGQNGEVQKARVVFDQMREKDD-ATWSGMI 199
M+ LG+ G +++A + M+ + D W ++
Sbjct: 348 HYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALL 385
Score = 45.1 bits (105), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 36/176 (20%), Positives = 79/176 (44%), Gaps = 6/176 (3%)
Query: 284 IFDNFASK-DIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTG 342
+F+ + K ++ WNS+I+ A+ G ++L+ F M + P+ T + +CS
Sbjct: 31 LFNKYVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALL 90
Query: 343 KVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSL 402
+ GR+ + + EP + +VD+ + G++ DA L + + + + W S+
Sbjct: 91 DLHSGRQAHQQ-ALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHR-NIVSWTSM 148
Query: 403 LGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRK 458
+ +++ D A A + + ++ + + +YA G + E+ M K
Sbjct: 149 ITG---YVQNDDAHRALRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVK 201
>gi|147790745|emb|CAN61464.1| hypothetical protein VITISV_005683 [Vitis vinifera]
Length = 785
Score = 446 bits (1148), Expect = e-122, Method: Compositional matrix adjust.
Identities = 242/650 (37%), Positives = 358/650 (55%), Gaps = 57/650 (8%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDM 62
E +V TA+V Y + G++ EA LF M ++VV+W M+ G DDA +L
Sbjct: 141 ESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQ 200
Query: 63 MPEKDVVAQTNMVLGYCQD---------GRVDEG---REIFDEMPKKNVISWTTMISGYV 110
M E+ + ++ ++G G+ G R FD V+ T ++ Y
Sbjct: 201 MQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFD----NGVVVGTGLLDMYA 256
Query: 111 NNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILG 170
+ ARK+F+VM +NEVSW+AM+ GY +++A ELF M +K + + LG
Sbjct: 257 KCQCLLYARKIFDVMGVRNEVSWSAMIGGYVXSDCMKEALELFDQMILKDAMDPTPVTLG 316
Query: 171 --------------------------------LGQN--------GEVQKARVVFDQMREK 190
LG G + A FD M K
Sbjct: 317 SVLRACAKLTDLSRGRKLHCYIIKLGXVLDILLGNTLLSMYAKCGVIDDAIRFFDXMNPK 376
Query: 191 DDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVH 250
D ++S ++ + G + +F +MQ G+ + +++ VL C+ LA+L HG H
Sbjct: 377 DSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSH 436
Query: 251 AQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGE 310
L+ F D + + LI MY KCG++ + +F+ DIV WN++I GY +GLG
Sbjct: 437 GYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGM 496
Query: 311 KSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACM 370
++L +FH++ + G+ PDD+T + +LS+CS++G V EGR F++M + + P+ EH CM
Sbjct: 497 EALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICM 556
Query: 371 VDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNA 430
VD+LGRAG +++A I MPFEPD IW +LL ACR H ++L E +KK+ L P++
Sbjct: 557 VDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHKNIELGEEVSKKIQSLGPEST 616
Query: 431 GPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEH 490
G ++LLSNIY++ GR+ D A +R + + K PGCSWIE+ VH F G D SH +
Sbjct: 617 GNFVLLSNIYSAAGRWDDAAHIRITQKDWGLKKIPGCSWIEINGIVHAFVGGD-QSHLQL 675
Query: 491 PMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVP 550
I R LE++ ++ GY + SFV DV+EEEK L YHSEKLA+A+G++ L G P
Sbjct: 676 SQINRKLEELLVEMKRLGYQAECSFVFQDVEEEEKEQILLYHSEKLAIAFGILNLKAGRP 735
Query: 551 IRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
I V KNLRVCGDCH+AIK ++ + REI +RDANRFHHFK+G C+C D+W
Sbjct: 736 ILVTKNLRVCGDCHAAIKFMTVITKREITVRDANRFHHFKNGTCNCGDFW 785
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 113/424 (26%), Positives = 194/424 (45%), Gaps = 27/424 (6%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM------PEKNVVSWTV-MLGGF--IRDS 51
+P +V+ W ++R Y G A L+ M P K + + G I D
Sbjct: 69 IPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDG 128
Query: 52 -RIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYV 110
I ++F + E DV T +V Y + G + E + +F M ++V++W MI+G
Sbjct: 129 VEIHSHAKMFGL--ESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCS 186
Query: 111 NNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVAS--NSMI 168
D A +L M E+ ++ ++G A KA+ V S N ++
Sbjct: 187 LYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVV 246
Query: 169 LGLGQNGEVQK------ARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLF-TLMQKE 221
+G G K AR +FD M +++ +WS MI Y E ++LF ++ K+
Sbjct: 247 VGTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVXSDCMKEALELFDQMILKD 306
Query: 222 GVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKG 281
+ +L SVL CA L L GR++H +++ +D+ + + L++MY KCG +
Sbjct: 307 AMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGXVLDILLGNTLLSMYAKCGVIDDA 366
Query: 282 KLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYT 341
FD KD V +++I+SG Q G +L +F M SG+ PD T++GVL ACS+
Sbjct: 367 IRFFDXMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHL 426
Query: 342 GKVKEGREIFESMKSKYLVEPKTEHYAC--MVDLLGRAGQVEDAMKLIEAMPFEPDAIIW 399
++ G F S + T+ C ++D+ + G++ A ++ M D + W
Sbjct: 427 AALQHG---FCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMD-RHDIVSW 482
Query: 400 GSLL 403
+++
Sbjct: 483 NAMI 486
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/339 (25%), Positives = 158/339 (46%), Gaps = 13/339 (3%)
Query: 78 YCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPE----KNEVSW 133
Y +V R +FDE+P +VI W +I Y N D A L+ M N+ ++
Sbjct: 53 YLSCNQVVLARRLFDEIPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTY 112
Query: 134 TAMLMGYTQCGRIQDAWELFKAMPM----KSVVASNSMILGLGQNGEVQKARVVFDQMRE 189
+L + I+D E+ M V +++ + G + +A+ +F M
Sbjct: 113 PFVLKACSGLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSH 172
Query: 190 KDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQV 249
+D W+ MI G + + L MQ+EG+ N +++ VL +L HG+ +
Sbjct: 173 RDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKAL 232
Query: 250 HAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLG 309
H VR FD V V + L+ MY KC L+ + IFD ++ V W+++I GY
Sbjct: 233 HGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVXSDCM 292
Query: 310 EKSLKVFHEMFSSGVM-PDDVTLVGVLSACSYTGKVKEGREIF-ESMKSKYLVEPKTEHY 367
+++L++F +M M P VTL VL AC+ + GR++ +K +++ +
Sbjct: 293 KEALELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGXVLDILLGNT 352
Query: 368 ACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGAC 406
++ + + G ++DA++ + M D++ + +++ C
Sbjct: 353 --LLSMYAKCGVIDDAIRFFDXMN-PKDSVSFSAIVSGC 388
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 124/265 (46%), Gaps = 19/265 (7%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWT-VMLGGFIRD-SRIDDARR 58
M RN VSW+AM+ GYV + EA LF QM K+ + T V LG +R +++ D R
Sbjct: 271 MGVRNEVSWSAMIGGYVXSDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSR 330
Query: 59 -------LFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVN 111
+ + D++ ++ Y + G +D+ FD M K+ +S++ ++SG V
Sbjct: 331 GRKLHCYIIKLGXVLDILLGNTLLSMYAKCGVIDDAIRFFDXMNPKDSVSFSAIVSGCVQ 390
Query: 112 NNRIDVARKLFEVMPEKN-EVSWTAML--------MGYTQCGRIQDAWELFKAMPMKSVV 162
N VA +F +M + T ML + Q G + + + +++
Sbjct: 391 NGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLI 450
Query: 163 ASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEG 222
N++I + G++ AR VF++M D +W+ MI Y G +E + LF + G
Sbjct: 451 C-NALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALG 509
Query: 223 VRVNFPSLISVLSVCASLASLDHGR 247
++ + + I +LS C+ + GR
Sbjct: 510 LKPDDITFICLLSSCSHSGLVMEGR 534
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 99/204 (48%), Gaps = 9/204 (4%)
Query: 231 ISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFAS 290
+ +L C SL +++H ++ + D V L +Y+ C ++V + +FD +
Sbjct: 12 LHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPN 71
Query: 291 KDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREI 350
+++WN II YA G + ++ ++H M GV P+ T VL ACS +++G EI
Sbjct: 72 PSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEI 131
Query: 351 FESMKSKYLVEPKTEHYAC--MVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRT 408
K + +++ + C +VD + G + +A +L +M D + W +++ C
Sbjct: 132 HSHAK---MFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHR-DVVAWNAMIAGCSL 187
Query: 409 HMKLDLAEVAAKKLLQLEPKNAGP 432
+ L + A + ++Q++ + P
Sbjct: 188 Y---GLCDDAVQLIMQMQEEGICP 208
>gi|297739440|emb|CBI29622.3| unnamed protein product [Vitis vinifera]
Length = 603
Score = 446 bits (1148), Expect = e-122, Method: Compositional matrix adjust.
Identities = 239/558 (42%), Positives = 348/558 (62%), Gaps = 17/558 (3%)
Query: 46 GFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTM 105
F+R++ ID M + V MV GY + + + +FD MP++NVI+WT M
Sbjct: 60 AFVRNAVID--------MYARKVADWNAMVSGYWKWESEGQAQWLFDVMPERNVITWTAM 111
Query: 106 ISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAM--PMKSVVA 163
++GY ++ AR+ F+ MPE++ VSW AML GY Q G ++A LF M ++ V
Sbjct: 112 VTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEALRLFDEMLGAYRNSVT 171
Query: 164 SNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFT-LMQKEG 222
N+MI + G++ AR +F+ M ++ TW+ MI Y + G I+LF ++ +
Sbjct: 172 WNAMISAYMRVGDLDSARKLFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKK 231
Query: 223 VRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGK 282
+ + +++SV+S C L +L+ G V L Q + + + +I MY +CG + K
Sbjct: 232 LTPDEVTMVSVISACGHLGALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAK 291
Query: 283 LIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTG 342
+F A++D+V +N++ISG+A +G G +++ + M G+ PD VT +GVL+ACS+ G
Sbjct: 292 RVFQEMATRDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAG 351
Query: 343 KVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSL 402
++EGR++FES+K +P +HYACMVDLLGR G++EDA + +E MP EP A ++GSL
Sbjct: 352 LLEEGRKVFESIK-----DPAIDHYACMVDLLGRVGELEDAKRTMERMPMEPHAGVYGSL 406
Query: 403 LGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVI 462
L A R H +++L E+AA KL +LEP N+G +ILLSNIYAS GR+ DV +R+ M+K V
Sbjct: 407 LNASRIHKQVELGELAANKLFELEPDNSGNFILLSNIYASAGRWKDVERIREAMKKGGVK 466
Query: 463 KPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDE 522
K G SW+E K+H F D SH I ++L ++ +REAGY D S VL DV+E
Sbjct: 467 KTTGWSWVEYGGKLHKFIVAD-RSHERSDDIYQLLIELRKKMREAGYIADKSCVLRDVEE 525
Query: 523 EEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRD 582
EEK + HSEKLA+ Y L+ G IRV+KNLRVC DCH+AIK+ISK+ GR II+RD
Sbjct: 526 EEKEEIVGTHSEKLAICYALLVSEAGAVIRVVKNLRVCWDCHTAIKMISKLEGRVIIVRD 585
Query: 583 ANRFHHFKDGLCSCRDYW 600
NRFH F DGLCSC+DYW
Sbjct: 586 NNRFHCFNDGLCSCKDYW 603
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 96/291 (32%), Positives = 150/291 (51%), Gaps = 42/291 (14%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
M R V W AMV GY + +A LF MPE+NV++WT M+ G+ + ++ ARR F
Sbjct: 69 MYARKVADWNAMVSGYWKWESEGQAQWLFDVMPERNVITWTAMVTGYAKVKDLEAARRYF 128
Query: 61 DMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEM--PKKNVISWTTMISGYVNNNRIDVA 118
D MPE+ VV+ M+ GY Q+G +E +FDEM +N ++W MIS Y+ +D A
Sbjct: 129 DCMPERSVVSWNAMLSGYAQNGLAEEALRLFDEMLGAYRNSVTWNAMISAYMRVGDLDSA 188
Query: 119 RKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAM-----------PMKSVVAS--- 164
RKLF MP +N V+W +M+ GY Q G+ A ELFK M M SV+++
Sbjct: 189 RKLFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACGH 248
Query: 165 --------------------------NSMILGLGQNGEVQKARVVFDQMREKDDATWSGM 198
N+MI + G ++ A+ VF +M +D +++ +
Sbjct: 249 LGALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVSYNTL 308
Query: 199 IKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQV 249
I + G+ +E I+L + M++ G+ + + I VL+ C+ L+ GR+V
Sbjct: 309 ISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEGRKV 359
>gi|302764988|ref|XP_002965915.1| hypothetical protein SELMODRAFT_167728 [Selaginella moellendorffii]
gi|300166729|gb|EFJ33335.1| hypothetical protein SELMODRAFT_167728 [Selaginella moellendorffii]
Length = 912
Score = 446 bits (1148), Expect = e-122, Method: Compositional matrix adjust.
Identities = 232/655 (35%), Positives = 372/655 (56%), Gaps = 56/655 (8%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MP+RN VS++ M++ Y+++G I EA L +MP+++ WT ML + R +++ARR+F
Sbjct: 259 MPDRNAVSYSFMIQIYIDQGKIGEAENLSRRMPQQDPTLWTSMLSAYSRHGLVEEARRIF 318
Query: 61 DMMPEKDVVAQTNMVL-GYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVAR 119
D +D N +L Y Q G + R F+ MP+ +V++WT +I+ N +++ A
Sbjct: 319 DRAARRDDEVSWNALLSAYAQAGHLHLARSTFERMPRHDVVAWTALIAVSGQNGQLEEAE 378
Query: 120 KLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQK 179
L++++PE++ V+WTA++ Y G++ ++ ++ MP ++ V+ +MI+ QNGEV +
Sbjct: 379 VLYDLIPERDLVAWTALIQAYGVNGKLTESKRVYALMPERNRVSHTAMIIAYSQNGEVVQ 438
Query: 180 ARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGV---------------- 223
AR + D + + D +T + MI Y + GY + ++F ++ V
Sbjct: 439 ARKMLDTLPDPDQSTRTSMIVAYAQNGYIKDAREMFDSIKNPDVIACNAMMEAYSSAQML 498
Query: 224 --------RVNFPSLISVLSVCASLA---SLDHGRQV-----HAQLVRCQFDV------- 260
+ +L+S ++ A+ A +LD + + H +V +
Sbjct: 499 DHAKAMFDSIKQKTLVSWNTMVAAYAQAGNLDEAKSIFDSIPHKNVVSHNVMIVAYAHNM 558
Query: 261 ---------------DVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQ 305
D + ++ M + G L + + +F +++V WNS+I+G A
Sbjct: 559 DLAEARRIFYSMDEKDTVTWTAMVAMVAQHGRLAEAQELFAKMPYRNVVSWNSLIAGMAS 618
Query: 306 YGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTE 365
G G +++ + M + G PD +T +G+L ACS+ G V+EG F SM+ + + P E
Sbjct: 619 CGHGMAAVRYLYVMRNEGAKPDHITFMGILIACSHVGLVEEGWTHFTSMQGDHGLIPWRE 678
Query: 366 HYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQL 425
HY MVD+LGRAGQ+ A +L+E MPF PD WGSLLG+C+TH + L AA+ LLQ
Sbjct: 679 HYCRMVDVLGRAGQLGAARELLETMPFIPDVGAWGSLLGSCKTHSDVKLGTRAAESLLQF 738
Query: 426 EPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCV 485
+ +++GPY+LL+N+Y+S GR D +R M+ R V K PG S I V+ +H F +
Sbjct: 739 DDQSSGPYVLLANMYSSVGRVADALAVRNRMKARGVKKQPGVSLIRVDGVLHRFVAGEA- 797
Query: 486 SHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKL 545
SHP H I+ L ++ L+++AGY PD+ VLH + +EEK L YHSEKLA+A+ +
Sbjct: 798 SHPRHQEILSELSRLQELMKKAGYQPDTKAVLHSILDEEKEVLLSYHSEKLAIAFASIAC 857
Query: 546 PEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
G PIR+MKNLRVC DCH+A K +SK++ REII+RD RFH+F++G CSC DYW
Sbjct: 858 EPGTPIRIMKNLRVCSDCHTATKFLSKLLQREIIVRDGYRFHNFENGTCSCGDYW 912
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 132/551 (23%), Positives = 238/551 (43%), Gaps = 103/551 (18%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
+PE NV S +++ Y E G + A +F Q+P NVVSW ++ GF + + +A +F
Sbjct: 73 LPEPNVFSRCILMQAYSENGDLGSAKAIFDQIPSHNVVSWNSLIAGFSQHGFMSNADEIF 132
Query: 61 DMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARK 120
MP + +M+ GY Q G + +FD P+ NVISW +I+GY +N I A+
Sbjct: 133 ARMPRWSSSSWNSMITGYAQSGDLASATAMFDRTPEHNVISWNALITGYSDNRMIPEAKG 192
Query: 121 LFEVMPEKNEVSWTAMLMGYTQCGRI------------QD-------------------A 149
+F+ P ++++SW AML Y Q G + QD A
Sbjct: 193 VFDRAPGRDKISWNAMLTAYAQSGDLDSAKEVFDRTPQQDIVSCTLMIKACAVQEILGHA 252
Query: 150 WELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYEL 209
E+F AMP ++ V+ + MI G++ +A + +M ++D W+ M+ Y R G
Sbjct: 253 VEIFAAMPDRNAVSYSFMIQIYIDQGKIGEAENLSRRMPQQDPTLWTSMLSAYSRHGLVE 312
Query: 210 EVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDV----DVYVA 265
E +F + V++ +L+S + + H L R F+ DV
Sbjct: 313 EARRIFDRAARRDDEVSWNALLSA-----------YAQAGHLHLARSTFERMPRHDVVAW 361
Query: 266 SVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVF--------- 316
+ LI + + G+L + ++++D +D+V W ++I Y G +S +V+
Sbjct: 362 TALIAVSGQNGQLEEAEVLYDLIPERDLVAWTALIQAYGVNGKLTESKRVYALMPERNRV 421
Query: 317 ------------------HEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKS-- 356
+M + PD T ++ A + G +K+ RE+F+S+K+
Sbjct: 422 SHTAMIIAYSQNGEVVQARKMLDTLPDPDQSTRTSMIVAYAQNGYIKDAREMFDSIKNPD 481
Query: 357 ---------KYLVEPKTEHYACMVDLL---------------GRAGQVEDAMKLIEAMPF 392
Y +H M D + +AG +++A + +++P
Sbjct: 482 VIACNAMMEAYSSAQMLDHAKAMFDSIKQKTLVSWNTMVAAYAQAGNLDEAKSIFDSIPH 541
Query: 393 EPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAEL 452
+ ++ +++ H +DLAE A + ++ K+ + + + A GR + EL
Sbjct: 542 KN--VVSHNVMIVAYAH-NMDLAE-ARRIFYSMDEKDTVTWTAMVAMVAQHGRLAEAQEL 597
Query: 453 RKNMRKRNVIK 463
M RNV+
Sbjct: 598 FAKMPYRNVVS 608
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 109/444 (24%), Positives = 212/444 (47%), Gaps = 56/444 (12%)
Query: 12 MVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQ 71
+++ Y + I +A +F ++PE NV S +++ + + + A+ +FD +P +VV+
Sbjct: 53 IIQMYGKCSRIDDAQAVFNELPEPNVFSRCILMQAYSENGDLGSAKAIFDQIPSHNVVSW 112
Query: 72 TNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEV 131
+++ G+ Q G + EIF MP+ + SW +MI+GY + + A +F+ PE N +
Sbjct: 113 NSLIAGFSQHGFMSNADEIFARMPRWSSSSWNSMITGYAQSGDLASATAMFDRTPEHNVI 172
Query: 132 SWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKD 191
SW A++ GY+ I +A +F P + ++ N+M+ Q+G++ A+ VFD+ ++D
Sbjct: 173 SWNALITGYSDNRMIPEAKGVFDRAPGRDKISWNAMLTAYAQSGDLDSAKEVFDRTPQQD 232
Query: 192 DATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHA 251
+ + MIK CA L H ++ A
Sbjct: 233 IVSCTLMIK-----------------------------------ACAVQEILGHAVEIFA 257
Query: 252 QLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEK 311
+ D + S +I +YI G++ + + + +D +W S++S Y+++GL E+
Sbjct: 258 AMP----DRNAVSYSFMIQIYIDQGKIGEAENLSRRMPQQDPTLWTSMLSAYSRHGLVEE 313
Query: 312 SLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMV 371
+ ++F + D+V+ +LSA + G + R FE M +V + ++
Sbjct: 314 ARRIFDR---AARRDDEVSWNALLSAYAQAGHLHLARSTFERMPRHDVVA-----WTALI 365
Query: 372 DLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEP-KNA 430
+ G+ GQ+E+A L + +P E D + W +L+ A + KL +K++ L P +N
Sbjct: 366 AVSGQNGQLEEAEVLYDLIP-ERDLVAWTALIQAYGVNGKL----TESKRVYALMPERNR 420
Query: 431 GPYILLSNIYASQGRFHDVAELRK 454
+ + Y+ G +V + RK
Sbjct: 421 VSHTAMIIAYSQNG---EVVQARK 441
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/295 (20%), Positives = 116/295 (39%), Gaps = 59/295 (20%)
Query: 220 KEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKC---- 275
K VR +L + + C L GR++H Q+ + ++++ +++I MY KC
Sbjct: 5 KTQVRELQNALATAIRSCGIAKDLAQGRKIHNQIADGEHRGNLFLQNLIIQMYGKCSRID 64
Query: 276 ---------------------------GELVKGKLIFDNFASKDIVMWNSIISGYAQYGL 308
G+L K IFD S ++V WNS+I+G++Q+G
Sbjct: 65 DAQAVFNELPEPNVFSRCILMQAYSENGDLGSAKAIFDQIPSHNVVSWNSLIAGFSQHGF 124
Query: 309 GEKSLKVFHEM---------------------FSSGVMPDDVTLVGVLSACSYTGKVKEG 347
+ ++F M S+ M D V+S + +
Sbjct: 125 MSNADEIFARMPRWSSSSWNSMITGYAQSGDLASATAMFDRTPEHNVISWNALITGYSDN 184
Query: 348 REIFESMKSKYLVEPKTE--HYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
R I E+ K + P + + M+ ++G ++ A ++ + P + D + ++ A
Sbjct: 185 RMIPEA-KGVFDRAPGRDKISWNAMLTAYAQSGDLDSAKEVFDRTP-QQDIVSCTLMIKA 242
Query: 406 CRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRN 460
C ++ A + + +NA Y + IY QG+ + L + M +++
Sbjct: 243 CAVQ---EILGHAVEIFAAMPDRNAVSYSFMIQIYIDQGKIGEAENLSRRMPQQD 294
>gi|147790932|emb|CAN77232.1| hypothetical protein VITISV_001089 [Vitis vinifera]
Length = 575
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 232/558 (41%), Positives = 323/558 (57%), Gaps = 36/558 (6%)
Query: 78 YCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVM----PEKNEVSW 133
Y GR+D +F +V WT +I G+ + A + M E N ++
Sbjct: 19 YASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFTF 78
Query: 134 TAML-----------------MG--------------YTQCGRIQDAWELFKAMPMKSVV 162
+++L +G Y + G + A +LF MP KS+V
Sbjct: 79 SSILKLCPIEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPEKSLV 138
Query: 163 ASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEG 222
+ +M+ ++GE+ ARV+FD M E+D W+ MI Y + G E + LF M K
Sbjct: 139 SLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAK 198
Query: 223 VRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGK 282
+ N +++SVLS C L +L+ GR VH+ + +V+V + L+ MY KCG L +
Sbjct: 199 AKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDAR 258
Query: 283 LIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTG 342
L+FD KD+V WNS+I GYA G +++L++F M G+ P ++T +G+LSAC ++G
Sbjct: 259 LVFDKIDDKDVVAWNSMIVGYAMXGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSG 318
Query: 343 KVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSL 402
V EG +IF MK +Y +EPK EHY CMV+LLGRAG VE A +L++ M EPD ++WG+L
Sbjct: 319 WVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTL 378
Query: 403 LGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVI 462
LGACR H K+ L E + L+ N+G YILLSNIYA+ G + VA LR M+ V
Sbjct: 379 LGACRLHGKIALGEKIVELLVDQNLANSGTYILLSNIYAAVGNWDGVARLRTMMKDSGVK 438
Query: 463 KPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDE 522
K PGCS IEV KVH F ++HP+ I MLE+I G L+ GY P + VLHD+ E
Sbjct: 439 KEPGCSSIEVNNKVHEFLAGG-LNHPKRKEIYMMLEEINGWLKSHGYTPQTDIVLHDIGE 497
Query: 523 EEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRD 582
EK SL HSEKLA+A+GL+ G I+++KNLRVC DCH KLISK+ GR+I++RD
Sbjct: 498 TEKERSLEVHSEKLAIAFGLINTQPGTTIKIVKNLRVCADCHEVTKLISKITGRKIVVRD 557
Query: 583 ANRFHHFKDGLCSCRDYW 600
NRFHHF +G CSC DYW
Sbjct: 558 RNRFHHFVNGSCSCGDYW 575
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 81/361 (22%), Positives = 160/361 (44%), Gaps = 50/361 (13%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFD--- 61
+V WTA++ G+ G+ +A + QM + V ++ I+ + L
Sbjct: 39 SVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFTFSSILKLCPIEPGKALHSQAV 98
Query: 62 -MMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARK 120
+ + D+ +T ++ Y + G V +++FD MP+K+++S T M++ Y + +D AR
Sbjct: 99 KLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARV 158
Query: 121 LFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELF------KAMPMKSVVAS---------- 164
LF+ M E++ V W M+ GYTQ G +A LF KA P + V S
Sbjct: 159 LFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGA 218
Query: 165 -----------------------NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKV 201
+++ + G ++ AR+VFD++ +KD W+ MI
Sbjct: 219 LESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVG 278
Query: 202 YERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVD 261
Y G+ E + LF M + G+ + I +LS C + G + ++ + ++ ++
Sbjct: 279 YAMXGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIFNKM-KDEYGIE 337
Query: 262 VYVA--SVLITMYIKCGELVKGKLIFDNFA-SKDIVMWNSIISG---YAQYGLGEKSLKV 315
+ ++ + + G + + + N D V+W +++ + + LGEK +++
Sbjct: 338 PKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGACRLHGKIALGEKIVEL 397
Query: 316 F 316
Sbjct: 398 L 398
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 126/258 (48%), Gaps = 17/258 (6%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDA---- 56
MPE+++VS TAM+ Y + G + A LF M E++ V W VM+ G+ ++ ++A
Sbjct: 132 MPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLF 191
Query: 57 RRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKK----NVISWTTMISGYVNN 112
RR+ + + V +++ Q G ++ GR + + NV T ++ Y
Sbjct: 192 RRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKC 251
Query: 113 NRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGL- 171
++ AR +F+ + +K+ V+W +M++GY G Q+A +LFK+M + +N +G+
Sbjct: 252 GSLEDARLVFDKIDDKDVVAWNSMIVGYAMXGFSQEALQLFKSMCRMGLHPTNITFIGIL 311
Query: 172 ---GQNGEVQKARVVFDQMR-----EKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGV 223
G +G V + +F++M+ E + M+ + R G+ + +L M E
Sbjct: 312 SACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPD 371
Query: 224 RVNFPSLISVLSVCASLA 241
V + +L+ + +A
Sbjct: 372 PVLWGTLLGACRLHGKIA 389
>gi|108708629|gb|ABF96424.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125586550|gb|EAZ27214.1| hypothetical protein OsJ_11153 [Oryza sativa Japonica Group]
Length = 748
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 231/640 (36%), Positives = 370/640 (57%), Gaps = 50/640 (7%)
Query: 11 AMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVA 70
A+V Y+ G + +A F +M ++V +W ML G R++R +A LF M + V
Sbjct: 109 ALVHAYLRFGRVRDAYRAFDEMRHRDVPAWNAMLSGLCRNARAAEAVGLFGRMVMEGVAG 168
Query: 71 QTNMV---------LG------------------------------YCQDGRVDEGREIF 91
V LG Y + G ++E R++F
Sbjct: 169 DAVTVSSVLPMCVLLGDRALALAMHLYAVKHGLDDELFVCNAMIDVYGKLGMLEEVRKVF 228
Query: 92 DEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCG--- 144
D M +++++W ++ISG+ ++ A ++F M + + ++ ++ QCG
Sbjct: 229 DGMSSRDLVTWNSIISGHEQGGQVASAVEMFCGMRDSGVSPDVLTLLSLASAIAQCGDIC 288
Query: 145 --RIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVY 202
R + + + + ++A N+++ + +++ A+ +FD M +D +W+ +I Y
Sbjct: 289 GGRSVHCYMVRRGWDVGDIIAGNAIVDMYAKLSKIEAAQRMFDSMPVRDAVSWNTLITGY 348
Query: 203 ERKGYELEVIDLFTLMQK-EGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVD 261
+ G E I ++ MQK EG++ + +SVL + L +L G ++HA ++ ++D
Sbjct: 349 MQNGLASEAIHVYDHMQKHEGLKPIQGTFVSVLPAYSHLGALQQGTRMHALSIKTGLNLD 408
Query: 262 VYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFS 321
VYV + +I +Y KCG+L + L+F+ + WN++ISG +G G K+L +F +M
Sbjct: 409 VYVGTCVIDLYAKCGKLDEAMLLFEQTPRRSTGPWNAVISGVGVHGHGAKALSLFSQMQQ 468
Query: 322 SGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVE 381
G+ PD VT V +L+ACS+ G V +GR F M++ Y ++P +HYACMVD+ GRAGQ++
Sbjct: 469 EGISPDHVTFVSLLAACSHAGLVDQGRNFFNMMQTAYGIKPIAKHYACMVDMFGRAGQLD 528
Query: 382 DAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYA 441
DA I MP +PD+ IWG+LLGACR H +++ +VA++ L +L+PKN G Y+L+SN+YA
Sbjct: 529 DAFDFIRNMPIKPDSAIWGALLGACRIHGNVEMGKVASQNLFELDPKNVGYYVLMSNMYA 588
Query: 442 SQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMF-TGRDCVSHPEHPMIMRMLEKI 500
G++ V E+R +R++N+ K PG S IEV++ V++F +G HP+H I R L +
Sbjct: 589 KVGKWDGVDEVRSLVRRQNLQKTPGWSSIEVKRSVNVFYSGNQMNIHPQHEEIQRELLDL 648
Query: 501 GGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVC 560
+R GY PD SFVL DV+E+EK L HSE+LA+A+G++ P P+ + KNLRVC
Sbjct: 649 LAKIRSLGYVPDYSFVLQDVEEDEKEQILNNHSERLAIAFGIINTPPRTPLHIYKNLRVC 708
Query: 561 GDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
GDCH+A K ISK+ REII+RD+NRFHHFKDG CSC D+W
Sbjct: 709 GDCHNATKYISKITEREIIVRDSNRFHHFKDGYCSCGDFW 748
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 121/455 (26%), Positives = 204/455 (44%), Gaps = 63/455 (13%)
Query: 67 DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVM- 125
D A +V Y + GRV + FDEM ++V +W M+SG N R A LF M
Sbjct: 103 DAFASGALVHAYLRFGRVRDAYRAFDEMRHRDVPAWNAMLSGLCRNARAAEAVGLFGRMV 162
Query: 126 ---PEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSV--------VASNSMILGLGQN 174
+ V+ +++L C + D L AM + +V N+MI G+
Sbjct: 163 MEGVAGDAVTVSSVL---PMCVLLGDR-ALALAMHLYAVKHGLDDELFVCNAMIDVYGKL 218
Query: 175 GEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVL 234
G +++ R VFD M +D TW+ +I +E+ G +++F M+ GV + +L+S+
Sbjct: 219 GMLEEVRKVFDGMSSRDLVTWNSIISGHEQGGQVASAVEMFCGMRDSGVSPDVLTLLSLA 278
Query: 235 SVCASLASLDHGRQVHAQLVRCQFDV-DVYVASVLITMYIKCGELVKGKLIFDNFASKDI 293
S A + GR VH +VR +DV D+ + ++ MY K ++ + +FD+ +D
Sbjct: 279 SAIAQCGDICGGRSVHCYMVRRGWDVGDIIAGNAIVDMYAKLSKIEAAQRMFDSMPVRDA 338
Query: 294 VMWNSIISGYAQYGLGEKSLKVF-HEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFE 352
V WN++I+GY Q GL +++ V+ H G+ P T V VL A S+ G +++G +
Sbjct: 339 VSWNTLITGYMQNGLASEAIHVYDHMQKHEGLKPIQGTFVSVLPAYSHLGALQQGTRM-H 397
Query: 353 SMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMP--------------------- 391
++ K + C++DL + G++++AM L E P
Sbjct: 398 ALSIKTGLNLDVYVGTCVIDLYAKCGKLDEAMLLFEQTPRRSTGPWNAVISGVGVHGHGA 457
Query: 392 -------------FEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQ----LEPKNAGPYI 434
PD + + SLL AC +H L ++Q ++P A Y
Sbjct: 458 KALSLFSQMQQEGISPDHVTFVSLLAAC-SHAGLVDQGRNFFNMMQTAYGIKPI-AKHYA 515
Query: 435 LLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSW 469
+ +++ G+ D + +NM IKP W
Sbjct: 516 CMVDMFGRAGQLDDAFDFIRNMP----IKPDSAIW 546
>gi|15227144|ref|NP_179798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206010|sp|Q9SHZ8.1|PP168_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g22070
gi|4587589|gb|AAD25817.1| hypothetical protein [Arabidopsis thaliana]
gi|330252165|gb|AEC07259.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 786
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 240/608 (39%), Positives = 373/608 (61%), Gaps = 13/608 (2%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMP 64
NV +++ Y + G A +F +M +++ SW M+ ++ ++D A F+ M
Sbjct: 180 NVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMA 239
Query: 65 EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVIS-----WTTMISGYVNNNRIDVAR 119
E+D+V +M+ G+ Q G +IF +M + +++S +++S N ++ + +
Sbjct: 240 ERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGK 299
Query: 120 KLF-EVMPEKNEVS---WTAMLMGYTQCGRIQDAWELFKAMPMKS--VVASNSMILGLGQ 173
++ ++ ++S A++ Y++CG ++ A L + K + +++ G +
Sbjct: 300 QIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIK 359
Query: 174 NGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISV 233
G++ +A+ +F ++++D W+ MI YE+ G E I+LF M G R N +L ++
Sbjct: 360 LGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAM 419
Query: 234 LSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNF-ASKD 292
LSV +SLASL HG+Q+H V+ V V++ LITMY K G + FD +D
Sbjct: 420 LSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERD 479
Query: 293 IVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFE 352
V W S+I AQ+G E++L++F M G+ PD +T VGV SAC++ G V +GR+ F+
Sbjct: 480 TVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFD 539
Query: 353 SMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKL 412
MK + P HYACMVDL GRAG +++A + IE MP EPD + WGSLL ACR H +
Sbjct: 540 MMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNI 599
Query: 413 DLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEV 472
DL +VAA++LL LEP+N+G Y L+N+Y++ G++ + A++RK+M+ V K G SWIEV
Sbjct: 600 DLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEV 659
Query: 473 EKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYH 532
+ KVH+F D +HPE I ++KI +++ GY PD++ VLHD++EE K LR+H
Sbjct: 660 KHKVHVFGVEDG-THPEKNEIYMTMKKIWDEIKKMGYVPDTASVLHDLEEEVKEQILRHH 718
Query: 533 SEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDG 592
SEKLA+A+GL+ P+ +R+MKNLRVC DCH+AIK ISK++GREII+RD RFHHFKDG
Sbjct: 719 SEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGREIIVRDTTRFHHFKDG 778
Query: 593 LCSCRDYW 600
CSCRDYW
Sbjct: 779 FCSCRDYW 786
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 111/437 (25%), Positives = 208/437 (47%), Gaps = 45/437 (10%)
Query: 16 YVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMV 75
Y + G A LF +MP + SW +L + + +D FD +P++D V+ T M+
Sbjct: 59 YSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMI 118
Query: 76 LGYCQDGRVDEGREIFDEMPKKNV----ISWTTMISGYVNNNRIDVARKLFEVMPE---K 128
+GY G+ + + +M K+ + + T +++ ++ +K+ + + +
Sbjct: 119 VGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLR 178
Query: 129 NEVSWTAMLMG-YTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQM 187
VS + L+ Y +CG A +F M ++ + + N+MI Q G++ A F+QM
Sbjct: 179 GNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQM 238
Query: 188 REKDDATWSGMIKVYERKGYELEVIDLFTLMQKEG-VRVNFPSLISVLSVCASLASLDHG 246
E+D TW+ MI + ++GY+L +D+F+ M ++ + + +L SVLS CA+L L G
Sbjct: 239 AERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIG 298
Query: 247 RQVHAQLVRCQFDVDVYVASVLITMYIKC------------------------------- 275
+Q+H+ +V FD+ V + LI+MY +C
Sbjct: 299 KQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYI 358
Query: 276 --GELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVG 333
G++ + K IF + +D+V W ++I GY Q+G +++ +F M G P+ TL
Sbjct: 359 KLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAA 418
Query: 334 VLSACSYTGKVKEGREIFES-MKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPF 392
+LS S + G++I S +KS + + ++ + +AG + A + + +
Sbjct: 419 MLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSN--ALITMYAKAGNITSASRAFDLIRC 476
Query: 393 EPDAIIWGSLLGACRTH 409
E D + W S++ A H
Sbjct: 477 ERDTVSWTSMIIALAQH 493
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 152/323 (47%), Gaps = 38/323 (11%)
Query: 103 TTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMG-----YTQCGRIQDAWELFKAMP 157
T ++ VN + +L K+ + ++ LM Y++ G A +LF MP
Sbjct: 17 TNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMP 76
Query: 158 MKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTL 217
+++ + N+++ + G++ FDQ+ ++D +W+ MI Y+ G + I +
Sbjct: 77 LRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGD 136
Query: 218 MQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGE 277
M KEG+ +L +VL+ A+ ++ G++VH+ +V+ +V V++ L+ MY KCG+
Sbjct: 137 MVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGD 196
Query: 278 LVKGKLIFD-------------------------------NFASKDIVMWNSIISGYAQY 306
+ K +FD A +DIV WNS+ISG+ Q
Sbjct: 197 PMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQR 256
Query: 307 GLGEKSLKVFHEMFSSGVM-PDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTE 365
G ++L +F +M ++ PD TL VLSAC+ K+ G++I + + +
Sbjct: 257 GYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGF-DISGI 315
Query: 366 HYACMVDLLGRAGQVEDAMKLIE 388
++ + R G VE A +LIE
Sbjct: 316 VLNALISMYSRCGGVETARRLIE 338
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 87/168 (51%), Gaps = 15/168 (8%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV----VSWTVMLGGFIRDSRIDDARR 58
ER+ VSWT+M+ + G EA LF M + + +++ + ++ R+
Sbjct: 477 ERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQ 536
Query: 59 LFDMMPEKDVVAQT-----NMVLGYCQDGRVDEGREIFDEMP-KKNVISWTTMISGYVNN 112
FDMM + D + T MV + + G + E +E ++MP + +V++W +++S +
Sbjct: 537 YFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVH 596
Query: 113 NRIDV----ARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAM 156
ID+ A +L + PE N +++A+ Y+ CG+ ++A ++ K+M
Sbjct: 597 KNIDLGKVAAERLLLLEPE-NSGAYSALANLYSACGKWEEAAKIRKSM 643
>gi|168045266|ref|XP_001775099.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673550|gb|EDQ60071.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 804
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 231/616 (37%), Positives = 360/616 (58%), Gaps = 17/616 (2%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV----VSWTVMLGGFIRDSRIDDA 56
M R+ VSWT + Y E G E+ + M ++ V +++ +L + ++
Sbjct: 190 MASRDEVSWTTLTGAYAESGYGEESLKTYHAMLQERVRPSRITYMNVLSACGSLAALEKG 249
Query: 57 RRLFDMMPEK----DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+++ + E DV T + Y + G + RE+F+ + ++VI+W TMI G+V++
Sbjct: 250 KQIHAHIVESEYHSDVRVSTALTKMYMKCGAFKDAREVFECLSYRDVIAWNTMIRGFVDS 309
Query: 113 NRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVA----S 164
+++ A F M E+ + ++T +L + G + E+ +V+
Sbjct: 310 GQLEEAHGTFHRMLEEGVAPDRATYTTVLSACARPGGLARGKEIHARAAKDGLVSDVRFG 369
Query: 165 NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVR 224
N++I + G ++ AR VFD+M ++D +W+ ++ Y +E F M ++GV+
Sbjct: 370 NALINMYSKAGSMKDARQVFDRMPKRDVVSWTTLLGRYADCDQVVESFTTFKQMLQQGVK 429
Query: 225 VNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLI 284
N + + VL C++ +L G+++HA++V+ D+ V + L++MY KCG + +
Sbjct: 430 ANKITYMCVLKACSNPVALKWGKEIHAEVVKAGLLADLAVTNALMSMYFKCGSVEDAIRV 489
Query: 285 FDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKV 344
F+ + +D+V WN++I G Q G G ++L+ + M S G+ P+ T V VLSAC V
Sbjct: 490 FEGMSMRDVVTWNTLIGGLGQNGRGLEALQRYEVMKSEGMRPNAATFVNVLSACRVCNLV 549
Query: 345 KEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLG 404
+EGR F M Y + P +HYACMVD+L RAG + +A +I +P +P A +WG+LL
Sbjct: 550 EEGRRQFAFMSKDYGIVPTEKHYACMVDILARAGHLREAEDVILTIPLKPSAAMWGALLA 609
Query: 405 ACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKP 464
ACR H +++ E AA+ L+LEP+NAG Y+ LS IYA+ G + DVA+LRK M++R V K
Sbjct: 610 ACRIHCNVEIGERAAEHCLKLEPQNAGLYVSLSAIYAAAGMWRDVAKLRKFMKERGVKKE 669
Query: 465 PGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEE 524
PG SWIE+ +VH F RD SHP I LE + ++ GY PD+ FV+HD+D+E
Sbjct: 670 PGRSWIEIAGEVHSFVARD-QSHPRTQEIYAELETLKKQMKSLGYVPDTRFVMHDLDDEG 728
Query: 525 KVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDAN 584
K ++ +HSEKLA+AYGL+ P G PIR+ KNLRVC DCH+A K ISK+ REII RDA+
Sbjct: 729 KERAVCHHSEKLAIAYGLISTPPGTPIRISKNLRVCTDCHTATKFISKITKREIIARDAH 788
Query: 585 RFHHFKDGLCSCRDYW 600
RFHHFK+G CSC DYW
Sbjct: 789 RFHHFKNGECSCGDYW 804
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 107/342 (31%), Positives = 180/342 (52%), Gaps = 11/342 (3%)
Query: 72 TNMVLG-YCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMP---- 126
TN +L Y G V+E R++FD+ K+V+SW MISGY + A LF +M
Sbjct: 66 TNTLLKLYAHCGSVNEARQLFDKFSNKSVVSWNVMISGYAHRGLAQEAFNLFTLMQQERL 125
Query: 127 EKNEVSWTAMLMGYTQCGRIQDAWEL----FKAMPMKSVVASNSMILGLGQNGEVQKARV 182
E ++ ++ ++L + + E+ +A N++I + G V+ AR
Sbjct: 126 EPDKFTFVSILSACSSPAVLNWGREIHVRVMEAGLANDTTVGNALISMYAKCGSVRDARR 185
Query: 183 VFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLAS 242
VFD M +D+ +W+ + Y GY E + + M +E VR + + ++VLS C SLA+
Sbjct: 186 VFDAMASRDEVSWTTLTGAYAESGYGEESLKTYHAMLQERVRPSRITYMNVLSACGSLAA 245
Query: 243 LDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISG 302
L+ G+Q+HA +V ++ DV V++ L MY+KCG + +F+ + +D++ WN++I G
Sbjct: 246 LEKGKQIHAHIVESEYHSDVRVSTALTKMYMKCGAFKDAREVFECLSYRDVIAWNTMIRG 305
Query: 303 YAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEP 362
+ G E++ FH M GV PD T VLSAC+ G + G+EI LV
Sbjct: 306 FVDSGQLEEAHGTFHRMLEEGVAPDRATYTTVLSACARPGGLARGKEIHARAAKDGLVS- 364
Query: 363 KTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLG 404
++++ +AG ++DA ++ + MP + D + W +LLG
Sbjct: 365 DVRFGNALINMYSKAGSMKDARQVFDRMP-KRDVVSWTTLLG 405
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 116/448 (25%), Positives = 199/448 (44%), Gaps = 51/448 (11%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMP 64
NV +++ Y G + EA LF + K+VVSW VM+ G+ +A LF +M
Sbjct: 62 NVYITNTLLKLYAHCGSVNEARQLFDKFSNKSVVSWNVMISGYAHRGLAQEAFNLFTLMQ 121
Query: 65 ----EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTT----MISGYVNNNRID 116
E D +++ ++ GREI + + + + TT +IS Y +
Sbjct: 122 QERLEPDKFTFVSILSACSSPAVLNWGREIHVRVMEAGLANDTTVGNALISMYAKCGSVR 181
Query: 117 VARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGL----- 171
AR++F+ M ++EVSWT + Y + G +++ + + AM + V S + +
Sbjct: 182 DARRVFDAMASRDEVSWTTLTGAYAESGYGEESLKTYHAMLQERVRPSRITYMNVLSACG 241
Query: 172 -------GQN---------------------------GEVQKARVVFDQMREKDDATWSG 197
G+ G + AR VF+ + +D W+
Sbjct: 242 SLAALEKGKQIHAHIVESEYHSDVRVSTALTKMYMKCGAFKDAREVFECLSYRDVIAWNT 301
Query: 198 MIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQ 257
MI+ + G E F M +EGV + + +VLS CA L G+++HA+ +
Sbjct: 302 MIRGFVDSGQLEEAHGTFHRMLEEGVAPDRATYTTVLSACARPGGLARGKEIHARAAKDG 361
Query: 258 FDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFH 317
DV + LI MY K G + + +FD +D+V W +++ YA +S F
Sbjct: 362 LVSDVRFGNALINMYSKAGSMKDARQVFDRMPKRDVVSWTTLLGRYADCDQVVESFTTFK 421
Query: 318 EMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIF-ESMKSKYLVEPKTEHYACMVDLLGR 376
+M GV + +T + VL ACS +K G+EI E +K+ L + + ++ + +
Sbjct: 422 QMLQQGVKANKITYMCVLKACSNPVALKWGKEIHAEVVKAGLLADLAVTN--ALMSMYFK 479
Query: 377 AGQVEDAMKLIEAMPFEPDAIIWGSLLG 404
G VEDA+++ E M D + W +L+G
Sbjct: 480 CGSVEDAIRVFEGMSMR-DVVTWNTLIG 506
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 150/281 (53%), Gaps = 6/281 (2%)
Query: 160 SVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQ 219
+V +N+++ G V +AR +FD+ K +W+ MI Y +G E +LFTLMQ
Sbjct: 62 NVYITNTLLKLYAHCGSVNEARQLFDKFSNKSVVSWNVMISGYAHRGLAQEAFNLFTLMQ 121
Query: 220 KEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELV 279
+E + + + +S+LS C+S A L+ GR++H +++ D V + LI+MY KCG +
Sbjct: 122 QERLEPDKFTFVSILSACSSPAVLNWGREIHVRVMEAGLANDTTVGNALISMYAKCGSVR 181
Query: 280 KGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACS 339
+ +FD AS+D V W ++ YA+ G GE+SLK +H M V P +T + VLSAC
Sbjct: 182 DARRVFDAMASRDEVSWTTLTGAYAESGYGEESLKTYHAMLQERVRPSRITYMNVLSACG 241
Query: 340 YTGKVKEGREIFESM-KSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAII 398
+++G++I + +S+Y + + + + + G +DA ++ E + + D I
Sbjct: 242 SLAALEKGKQIHAHIVESEYHSDVRVS--TALTKMYMKCGAFKDAREVFECLSYR-DVIA 298
Query: 399 WGSLLGACRTHMKLDLAEVAAKKLLQ--LEPKNAGPYILLS 437
W +++ +L+ A ++L+ + P A +LS
Sbjct: 299 WNTMIRGFVDSGQLEEAHGTFHRMLEEGVAPDRATYTTVLS 339
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 102/193 (52%), Gaps = 2/193 (1%)
Query: 213 DLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMY 272
D+ + ++G +V+ + +L C L G+QVH ++RC +VY+ + L+ +Y
Sbjct: 14 DVLQYLHRKGPQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRCGVKPNVYITNTLLKLY 73
Query: 273 IKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLV 332
CG + + + +FD F++K +V WN +ISGYA GL +++ +F M + PD T V
Sbjct: 74 AHCGSVNEARQLFDKFSNKSVVSWNVMISGYAHRGLAQEAFNLFTLMQQERLEPDKFTFV 133
Query: 333 GVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPF 392
+LSACS + GREI + L T A ++ + + G V DA ++ +AM
Sbjct: 134 SILSACSSPAVLNWGREIHVRVMEAGLANDTTVGNA-LISMYAKCGSVRDARRVFDAMA- 191
Query: 393 EPDAIIWGSLLGA 405
D + W +L GA
Sbjct: 192 SRDEVSWTTLTGA 204
>gi|357507065|ref|XP_003623821.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498836|gb|AES80039.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 837
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 242/647 (37%), Positives = 359/647 (55%), Gaps = 52/647 (8%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLF--WQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
E NV T +V Y + ++EA LF + KN V WT M+ G+ ++ A F
Sbjct: 194 EGNVFVVTGLVDMYAKCKCVSEAEFLFKGLEFDRKNHVLWTAMVTGYAQNGDGYKAVEFF 253
Query: 61 DMMPEKDV----------VAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYV 110
M + V + + VL C +V I NV + ++ Y
Sbjct: 254 RYMHAQGVECNQYTFPTILTACSSVLARCFGEQVHGF--IVKSGFGSNVYVQSALVDMYA 311
Query: 111 NNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSV--------- 161
+ A+ + E M + + VSW ++++G+ + G ++A LFK M +++
Sbjct: 312 KCGDLKNAKNMLETMEDDDVVSWNSLMVGFVRHGLEEEALRLFKNMHGRNMKIDDYTFPS 371
Query: 162 ----------------------------VASNSMILGLGQNGEVQKARVVFDQMREKDDA 193
+ SN+++ + G++ A VF++M EKD
Sbjct: 372 VLNCCVVGSINPKSVHGLIIKTGFENYKLVSNALVDMYAKTGDMDCAYTVFEKMLEKDVI 431
Query: 194 TWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQL 253
+W+ ++ Y + E + +F M+ GV + + S+LS CA L L+ G+QVH
Sbjct: 432 SWTSLVTGYAQNNSHEESLKIFCDMRVTGVNPDQFIVASILSACAELTLLEFGKQVHLDF 491
Query: 254 VRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSL 313
++ V + L+ MY KCG L IF + KD++ W +II GYAQ G G SL
Sbjct: 492 IKSGLRWSQSVYNSLVAMYAKCGCLDDADAIFVSMQVKDVITWTAIIVGYAQNGKGRNSL 551
Query: 314 KVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDL 373
K + M SSG PD +T +G+L ACS+ G V EGR+ F+ M Y ++P EHYACM+DL
Sbjct: 552 KFYDAMVSSGTRPDFITFIGLLFACSHAGLVDEGRKYFQQMNKVYGIKPGPEHYACMIDL 611
Query: 374 LGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPY 433
GR+G++++A +L++ M +PDA +W SLL ACR H L+LAE AA L +LEP NA PY
Sbjct: 612 FGRSGKLDEAKQLLDQMDVKPDATVWKSLLSACRVHENLELAERAATNLFELEPMNAMPY 671
Query: 434 ILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMI 493
++LSN+Y++ +++DVA++RK M+ + ++K PGCSW+E+ +V+ F D HP I
Sbjct: 672 VMLSNMYSASRKWNDVAKIRKLMKSKGIVKEPGCSWLEINSRVNTFISDD-RGHPREAEI 730
Query: 494 MRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRV 553
+++I ++EAGY PD SF LHD+D+E K L YHSEKLAVA+GL+ P PIR+
Sbjct: 731 YTKIDEIILRIKEAGYVPDMSFSLHDMDKEGKEVGLAYHSEKLAVAFGLLAAPPSAPIRI 790
Query: 554 MKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
KNLRVCGDCHSA+K IS+V R IILRD+N FHHF++G CSC DYW
Sbjct: 791 FKNLRVCGDCHSAMKYISRVFTRHIILRDSNCFHHFREGECSCGDYW 837
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 113/380 (29%), Positives = 189/380 (49%), Gaps = 52/380 (13%)
Query: 69 VAQTNMVLG-YCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPE 127
+ QTN +L + G+V++ R++FD+MP+K+ SW TMIS YVN R+ AR+LF+
Sbjct: 65 IYQTNQLLNQLSKSGQVNDARKLFDKMPQKDEYSWNTMISSYVNVGRLVEARELFDGCSC 124
Query: 128 KNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMI---------LGLGQNGE-- 176
K+ ++W++++ GY + G +A++LF++M ++ AS + LGL Q GE
Sbjct: 125 KSSITWSSIISGYCKFGCKVEAFDLFRSMRLEGWKASQFTLGSVLRVCSSLGLIQTGEMI 184
Query: 177 ----------------------------VQKARVVFD--QMREKDDATWSGMIKVYERKG 206
V +A +F + K+ W+ M+ Y + G
Sbjct: 185 HGFVVKNGFEGNVFVVTGLVDMYAKCKCVSEAEFLFKGLEFDRKNHVLWTAMVTGYAQNG 244
Query: 207 YELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVAS 266
+ ++ F M +GV N + ++L+ C+S+ + G QVH +V+ F +VYV S
Sbjct: 245 DGYKAVEFFRYMHAQGVECNQYTFPTILTACSSVLARCFGEQVHGFIVKSGFGSNVYVQS 304
Query: 267 VLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMP 326
L+ MY KCG+L K + + D+V WNS++ G+ ++GL E++L++F M +
Sbjct: 305 ALVDMYAKCGDLKNAKNMLETMEDDDVVSWNSLMVGFVRHGLEEEALRLFKNMHGRNMKI 364
Query: 327 DDVTLVGVLSAC---SYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDA 383
DD T VL+ C S K G I ++ LV +VD+ + G ++ A
Sbjct: 365 DDYTFPSVLNCCVVGSINPKSVHGLIIKTGFENYKLVSNA------LVDMYAKTGDMDCA 418
Query: 384 MKLIEAMPFEPDAIIWGSLL 403
+ E M E D I W SL+
Sbjct: 419 YTVFEKM-LEKDVISWTSLV 437
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 116/453 (25%), Positives = 211/453 (46%), Gaps = 55/453 (12%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MP+++ SW M+ YV G + EA LF K+ ++W+ ++ G+ + +A LF
Sbjct: 91 MPQKDEYSWNTMISSYVNVGRLVEARELFDGCSCKSSITWSSIISGYCKFGCKVEAFDLF 150
Query: 61 -DMMPEKDVVAQTNM--VLGYCQD-GRVDEGREIFDEMPKK----NVISWTTMISGYVNN 112
M E +Q + VL C G + G I + K NV T ++ Y
Sbjct: 151 RSMRLEGWKASQFTLGSVLRVCSSLGLIQTGEMIHGFVVKNGFEGNVFVVTGLVDMYAKC 210
Query: 113 NRIDVARKLFEVMP--EKNEVSWTAMLMGYTQCGRIQDAWELFKAM----------PMKS 160
+ A LF+ + KN V WTAM+ GY Q G A E F+ M +
Sbjct: 211 KCVSEAEFLFKGLEFDRKNHVLWTAMVTGYAQNGDGYKAVEFFRYMHAQGVECNQYTFPT 270
Query: 161 VVASNSMIL---------------GLGQN--------------GEVQKARVVFDQMREKD 191
++ + S +L G G N G+++ A+ + + M + D
Sbjct: 271 ILTACSSVLARCFGEQVHGFIVKSGFGSNVYVQSALVDMYAKCGDLKNAKNMLETMEDDD 330
Query: 192 DATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHA 251
+W+ ++ + R G E E + LF M ++++ + SVL+ C + S++ + VH
Sbjct: 331 VVSWNSLMVGFVRHGLEEEALRLFKNMHGRNMKIDDYTFPSVLNCCV-VGSIN-PKSVHG 388
Query: 252 QLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEK 311
+++ F+ V++ L+ MY K G++ +F+ KD++ W S+++GYAQ E+
Sbjct: 389 LIIKTGFENYKLVSNALVDMYAKTGDMDCAYTVFEKMLEKDVISWTSLVTGYAQNNSHEE 448
Query: 312 SLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREI-FESMKSKYLVEPKTEHYACM 370
SLK+F +M +GV PD + +LSAC+ ++ G+++ + +KS + Y +
Sbjct: 449 SLKIFCDMRVTGVNPDQFIVASILSACAELTLLEFGKQVHLDFIKSG--LRWSQSVYNSL 506
Query: 371 VDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
V + + G ++DA + +M + D I W +++
Sbjct: 507 VAMYAKCGCLDDADAIFVSMQVK-DVITWTAII 538
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 142/287 (49%), Gaps = 45/287 (15%)
Query: 155 AMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYE----------- 203
A +S+ +N ++ L ++G+V AR +FD+M +KD+ +W+ MI Y
Sbjct: 59 AASYESIYQTNQLLNQLSKSGQVNDARKLFDKMPQKDEYSWNTMISSYVNVGRLVEAREL 118
Query: 204 --------------------RKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASL 243
+ G ++E DLF M+ EG + + +L SVL VC+SL +
Sbjct: 119 FDGCSCKSSITWSSIISGYCKFGCKVEAFDLFRSMRLEGWKASQFTLGSVLRVCSSLGLI 178
Query: 244 DHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDN--FASKDIVMWNSIIS 301
G +H +V+ F+ +V+V + L+ MY KC + + + +F F K+ V+W ++++
Sbjct: 179 QTGEMIHGFVVKNGFEGNVFVVTGLVDMYAKCKCVSEAEFLFKGLEFDRKNHVLWTAMVT 238
Query: 302 GYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYT-----GKVKEGREIFESMKS 356
GYAQ G G K+++ F M + GV + T +L+ACS G+ G + S
Sbjct: 239 GYAQNGDGYKAVEFFRYMHAQGVECNQYTFPTILTACSSVLARCFGEQVHGFIVKSGFGS 298
Query: 357 KYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
V+ + +VD+ + G +++A ++E M + D + W SL+
Sbjct: 299 NVYVQ------SALVDMYAKCGDLKNAKNMLETME-DDDVVSWNSLM 338
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 37/180 (20%), Positives = 81/180 (45%), Gaps = 23/180 (12%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM----PEKNVVSWTVMLGGFIRDSRIDDA 56
M ++V++WTA++ GY + G + + M + +++ +L +D+
Sbjct: 526 MQVKDVITWTAIIVGYAQNGKGRNSLKFYDAMVSSGTRPDFITFIGLLFACSHAGLVDEG 585
Query: 57 RRLFDMM---------PEKDVVAQTNMVLGYCQDGRVDEGREIFDEMP-KKNVISWTTMI 106
R+ F M PE M+ + + G++DE +++ D+M K + W +++
Sbjct: 586 RKYFQQMNKVYGIKPGPEHYAC----MIDLFGRSGKLDEAKQLLDQMDVKPDATVWKSLL 641
Query: 107 SGYVNNNRIDVARK----LFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVV 162
S + +++A + LFE+ P N + + + Y+ + D ++ K M K +V
Sbjct: 642 SACRVHENLELAERAATNLFELEP-MNAMPYVMLSNMYSASRKWNDVAKIRKLMKSKGIV 700
>gi|414867142|tpg|DAA45699.1| TPA: hypothetical protein ZEAMMB73_401104 [Zea mays]
Length = 746
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 232/646 (35%), Positives = 369/646 (57%), Gaps = 50/646 (7%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMP 64
NV + ++V Y+ G + EA +F +MPE++V +W ML G R++R DA L M
Sbjct: 101 NVFASGSLVHAYLRFGRVAEAYRVFDEMPERDVPAWNAMLSGLCRNTRAADAVTLLGRMV 160
Query: 65 EKDV---------VAQTNMVLG------------------------------YCQDGRVD 85
+ V V +VLG Y + G +
Sbjct: 161 GEGVAGDAVTLSSVLPMCVVLGDRALALVMHVYAVKHGLSGELFVCNALIDVYGKLGMLT 220
Query: 86 EGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEK----NEVSWTAMLMGYT 141
E +F M +++++W ++IS ++ A +LF M E + ++ ++
Sbjct: 221 EAHWVFGGMALRDLVTWNSIISANEQGGKVAAAVELFHGMMESGVCPDVLTLVSLASAVA 280
Query: 142 QCGRIQDAWELF-----KAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWS 196
QCG A + + + ++A N+M+ + ++ A+ VFD + ++D +W+
Sbjct: 281 QCGDELGAKSVHCYVRRRGWDVGDIIAGNAMVDMYAKMSKIDAAQKVFDNLPDRDVVSWN 340
Query: 197 GMIKVYERKGYELEVIDLFTLMQK-EGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVR 255
+I Y + G E I ++ M EG++ + +SVL + L L G ++HA ++
Sbjct: 341 TLITGYMQNGLANEAIRIYNDMHNHEGLKPIQGTFVSVLPAYSYLGGLQQGMRMHALSIK 400
Query: 256 CQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKV 315
++DVYV + LI +Y KCG+LV+ +F++ + WN+II+G +G G K+L +
Sbjct: 401 TGLNLDVYVTTCLIDLYAKCGKLVEAMFLFEHMPRRSTGPWNAIIAGLGVHGHGAKALSL 460
Query: 316 FHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLG 375
F +M + PD VT V +L+ACS+ G V +GR F+ M++ Y + P +HY CMVD+LG
Sbjct: 461 FSQMQQEEIKPDHVTFVSLLAACSHAGLVDQGRSFFDLMQTVYGIVPIAKHYTCMVDMLG 520
Query: 376 RAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYIL 435
RAGQ+++A + I++MP +PD+ +WG+LLGACR H +++ +VA++ L +L+P+N G Y+L
Sbjct: 521 RAGQLDEAFEFIQSMPIKPDSAVWGALLGACRIHGNVEMGKVASQNLFELDPENVGYYVL 580
Query: 436 LSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMF-TGRDCVSHPEHPMIM 494
+SN+YA G++ V +R +R++N+ K PG S +EV+ V +F +G HP+H I
Sbjct: 581 MSNMYAKIGKWDGVDAVRSLVRRQNLQKTPGWSSMEVKGSVSVFYSGTQTEPHPQHEEIQ 640
Query: 495 RMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVM 554
R L + ++ AGY PD SFVL DV+E+EK L HSE+LA+A+G++ P G P+ +
Sbjct: 641 RGLHDLLAKMKSAGYVPDYSFVLQDVEEDEKEQILNNHSERLAIAFGIINTPPGTPLHIY 700
Query: 555 KNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
KNLRVCGDCHSA K ISK+ REII+RDANRFHHFKDG CSC D+W
Sbjct: 701 KNLRVCGDCHSATKYISKITEREIIVRDANRFHHFKDGHCSCGDFW 746
>gi|147864534|emb|CAN78385.1| hypothetical protein VITISV_017238 [Vitis vinifera]
Length = 643
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 229/539 (42%), Positives = 334/539 (61%), Gaps = 33/539 (6%)
Query: 56 ARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRI 115
A++LF + ++DVV+ M+ GY + G + R +FD M ++VISW T+I+GY +I
Sbjct: 54 AKQLFSLCSDRDVVSWNAMIDGYVKRGEMGHTRMVFDRMVCRDVISWNTIINGYAIVGKI 113
Query: 116 DVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNG 175
D A++LF+ MPE+N VSW +ML G+ +CG +++A+ LF MP + VV+ NSM+ Q G
Sbjct: 114 DEAKRLFDEMPERNLVSWNSMLSGFVKCGNVEEAFGLFSEMPCRDVVSWNSMLACYAQCG 173
Query: 176 EVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLS 235
+ +A +FDQMR GV+ +++S+LS
Sbjct: 174 KPNEALALFDQMRAV-------------------------------GVKPTEATVVSLLS 202
Query: 236 VCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVM 295
CA L +LD G +H + + +V+ V + L+ MY KCG++ +F+ SKD++
Sbjct: 203 ACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAMESKDVLA 262
Query: 296 WNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMK 355
WN+II+G A +G +++ ++F EM + V P+D+T V +LSACS+ G V EG+++ + M
Sbjct: 263 WNTIIAGMAIHGHVKEAQQLFKEMKEASVEPNDITFVAMLSACSHAGMVDEGQKLLDCMS 322
Query: 356 SKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLA 415
S Y +EPK EHY C++DLL RAG +E+AM+LI MP EP+ G+LLG CR H +L
Sbjct: 323 SSYGIEPKVEHYDCVIDLLARAGLLEEAMELIGTMPMEPNPSALGALLGGCRIHGNFELG 382
Query: 416 EVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKK 475
E+ K+L+ L+P ++G YILLSNIYA+ ++ D ++R M+ + K PG S IE++
Sbjct: 383 EMVGKRLINLQPCHSGRYILLSNIYAAAKKWDDARKVRNLMKVNGISKVPGVSVIELKGM 442
Query: 476 VHMFTGRDCVSHPEHPMIMRMLEKIGGLLREA-GYCPDSSFVLHDVDEEEKVHSLRYHSE 534
VH F D SHPE I L +I L+ A GY D+ VL D++EE+K H+L HSE
Sbjct: 443 VHRFVAGDW-SHPESNKIYDKLNEIHTRLKSAIGYSADTGNVLLDMEEEDKEHALAVHSE 501
Query: 535 KLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGL 593
KLA+AYGL+ L IR++KNLRVC DCH KLISKV GREII+RD NRFHHF+DG
Sbjct: 502 KLAIAYGLLHLDSKEAIRIVKNLRVCRDCHHVTKLISKVYGREIIVRDRNRFHHFEDGF 560
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 134/279 (48%), Gaps = 39/279 (13%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVV 69
+++ Y + A LF +++VVSW M+ G+++ + R +FD M +DV+
Sbjct: 39 NSLIHLYANGKDLGAAKQLFSLCSDRDVVSWNAMIDGYVKRGEMGHTRMVFDRMVCRDVI 98
Query: 70 AQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKN 129
+ ++ GY G++DE + +FDEMP++N++SW +M+SG+V ++ A LF MP ++
Sbjct: 99 SWNTIINGYAIVGKIDEAKRLFDEMPERNLVSWNSMLSGFVKCGNVEEAFGLFSEMPCRD 158
Query: 130 EVSWTAMLMGYTQCGRIQDAWELFKAM------PMKSVVAS------------------- 164
VSW +ML Y QCG+ +A LF M P ++ V S
Sbjct: 159 VVSWNSMLACYAQCGKPNEALALFDQMRAVGVKPTEATVVSLLSACAHLGALDKGLHLHT 218
Query: 165 --------------NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELE 210
+++ + G++ A VF+ M KD W+ +I G+ E
Sbjct: 219 YINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIHGHVKE 278
Query: 211 VIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQV 249
LF M++ V N + +++LS C+ +D G+++
Sbjct: 279 AQQLFKEMKEASVEPNDITFVAMLSACSHAGMVDEGQKL 317
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 74/247 (29%), Positives = 130/247 (52%), Gaps = 43/247 (17%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDM 62
+R+VVSW AM+ GYV+ G + +F +M ++V+SW ++ G+ +ID+A+RLFD
Sbjct: 63 DRDVVSWNAMIDGYVKRGEMGHTRMVFDRMVCRDVISWNTIINGYAIVGKIDEAKRLFDE 122
Query: 63 MPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLF 122
MPE+++V+ +M+ G+ + G V+E +F EMP ++V+SW +M++ Y + + A LF
Sbjct: 123 MPERNLVSWNSMLSGFVKCGNVEEAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALALF 182
Query: 123 EVMP---------------------------------------EKNEVSWTAMLMGYTQC 143
+ M E N + TA++ Y +C
Sbjct: 183 DQMRAVGVKPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKC 242
Query: 144 GRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREK----DDATWSGMI 199
G+I A ++F AM K V+A N++I G+ +G V++A+ +F +M+E +D T+ M+
Sbjct: 243 GKISLATQVFNAMESKDVLAWNTIIAGMAIHGHVKEAQQLFKEMKEASVEPNDITFVAML 302
Query: 200 KVYERKG 206
G
Sbjct: 303 SACSHAG 309
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 83/174 (47%), Gaps = 11/174 (6%)
Query: 233 VLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKD 292
V+ C + G VH +V+ F+ D Y+ + LI +Y +L K +F + +D
Sbjct: 6 VIKACNESSVTWFGLLVHTHVVKSGFECDSYIVNSLIHLYANGKDLGAAKQLFSLCSDRD 65
Query: 293 IVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFE 352
+V WN++I GY + G + VF M V D ++ +++ + GK+ E + +F+
Sbjct: 66 VVSWNAMIDGYVKRGEMGHTRMVFDRM----VCRDVISWNTIINGYAIVGKIDEAKRLFD 121
Query: 353 SMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGAC 406
M + LV + M+ + G VE+A L MP D + W S+L AC
Sbjct: 122 EMPERNLVS-----WNSMLSGFVKCGNVEEAFGLFSEMPCR-DVVSWNSML-AC 168
>gi|413953302|gb|AFW85951.1| hypothetical protein ZEAMMB73_518426 [Zea mays]
Length = 620
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 221/522 (42%), Positives = 329/522 (63%), Gaps = 7/522 (1%)
Query: 4 RNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMM 63
RNVV+WTA++ GY G++ EA LF +MP++NVVSW ML + R DA LFD M
Sbjct: 101 RNVVTWTALLSGYARAGLVDEAEVLFQRMPQRNVVSWNTMLEAYAVAGRAGDACALFDRM 160
Query: 64 PEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFE 123
P +D + ++ + G VD+ RE+F MP+++V++WTTM+ G + +D AR LF+
Sbjct: 161 PVRDAGSWNILLAMLVRSGSVDKARELFGRMPERDVMAWTTMVDGVARSGNVDEARLLFD 220
Query: 124 VMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVV 183
MPE+N VSW AM+ GYT+ R+ +A +LF MP + + + N MI G QN ++++AR +
Sbjct: 221 SMPERNVVSWNAMISGYTRNHRLDEALDLFTKMPHRDIASCNIMITGFIQNKDLKRARKL 280
Query: 184 FDQMREKDDATWSGMIKVYERKGYELEV-IDLFTLMQKEGVRVNFPSLISVLSVCASLAS 242
FD+M E++ TW+ M+ Y KG + E+ + LF M G+R N + + L C+ LA+
Sbjct: 281 FDEMPERNVVTWTTMMNGY-LKGKQSELSLGLFRGMLMSGIRPNQVTFLGALDACSDLAT 339
Query: 243 LDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISG 302
L G+QVH + + F VD +V S L+ +Y KCGE+ + +FD KD++ WN II+
Sbjct: 340 LCEGKQVHQMICKTAFQVDTFVGSALMNVYAKCGEVGLARKLFDLSREKDLISWNGIIAA 399
Query: 303 YAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEP 362
YA +G+G +++ ++ +M +G P+DVT V +LSACS++G V EG +IFESM + +
Sbjct: 400 YAHHGVGIEAIHLYEKMQGNGYRPNDVTYVVLLSACSHSGLVDEGLKIFESMVNDRSIAV 459
Query: 363 KTEHYACMVDLLGRAGQVEDAMKLIEAMPFEP-DAIIWGSLLGACRTHMKLDLAEVAAKK 421
+ EHY C++DL RAG+++DA +LI + +P +W +LLG C H + +AA+
Sbjct: 460 RDEHYTCLIDLCSRAGRLDDAKRLIHYLKIKPASGSVWSALLGGCNAHGNESIGNLAARN 519
Query: 422 LLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTG 481
L+Q EP NAG Y LLSNIYAS G++ + AE+R M R + K PGCSWIEV KVH+F
Sbjct: 520 LIQAEPDNAGTYTLLSNIYASAGKWKEAAEIRSEMNNRGLKKQPGCSWIEVANKVHVFVA 579
Query: 482 RDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEE 523
RD SH E +I +L+ I ++R G P S ++H VDEE
Sbjct: 580 RD-KSHSESDLIYGLLQNIHYMMRIVGTVP--SDLVH-VDEE 617
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 116/361 (32%), Positives = 194/361 (53%), Gaps = 15/361 (4%)
Query: 52 RIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEM-PKKNVISWTTMISGYV 110
R+ DAR+LFD PE+DVV+ T +V Y + G + + R +FD ++NV++WT ++SGY
Sbjct: 55 RVWDARKLFDGTPERDVVSWTALVSAYARRGMLRDARSLFDRSDARRNVVTWTALLSGYA 114
Query: 111 NNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILG 170
+D A LF+ MP++N VSW ML Y GR DA LF MP++ + N ++
Sbjct: 115 RAGLVDEAEVLFQRMPQRNVVSWNTMLEAYAVAGRAGDACALFDRMPVRDAGSWNILLAM 174
Query: 171 LGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSL 230
L ++G V KAR +F +M E+D W+ M+ R G E LF M + V V++ ++
Sbjct: 175 LVRSGSVDKARELFGRMPERDVMAWTTMVDGVARSGNVDEARLLFDSMPERNV-VSWNAM 233
Query: 231 ISVLSVCASL-ASLD-HGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNF 288
IS + L +LD + H + C +++IT +I+ +L + + +FD
Sbjct: 234 ISGYTRNHRLDEALDLFTKMPHRDIASC---------NIMITGFIQNKDLKRARKLFDEM 284
Query: 289 ASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGR 348
+++V W ++++GY + E SL +F M SG+ P+ VT +G L ACS + EG+
Sbjct: 285 PERNVVTWTTMMNGYLKGKQSELSLGLFRGMLMSGIRPNQVTFLGALDACSDLATLCEGK 344
Query: 349 EIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRT 408
++ + M K + T + ++++ + G+V A KL + + E D I W ++ A
Sbjct: 345 QVHQ-MICKTAFQVDTFVGSALMNVYAKCGEVGLARKLFD-LSREKDLISWNGIIAAYAH 402
Query: 409 H 409
H
Sbjct: 403 H 403
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 131/436 (30%), Positives = 194/436 (44%), Gaps = 82/436 (18%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MP+RNVVSW M+ Y G +A LF +MP ++ SW ++L +R +D AR LF
Sbjct: 129 MPQRNVVSWNTMLEAYAVAGRAGDACALFDRMPVRDAGSWNILLAMLVRSGSVDKARELF 188
Query: 61 DMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRID---- 116
MPE+DV+A T MV G + G VDE R +FD MP++NV+SW MISGY N+R+D
Sbjct: 189 GRMPERDVMAWTTMVDGVARSGNVDEARLLFDSMPERNVVSWNAMISGYTRNHRLDEALD 248
Query: 117 ---------------------------VARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDA 149
ARKLF+ MPE+N V+WT M+ GY + + + +
Sbjct: 249 LFTKMPHRDIASCNIMITGFIQNKDLKRARKLFDEMPERNVVTWTTMMNGYLKGKQSELS 308
Query: 150 WELFKAMPMKSVVASNSMILG--------------------------------------- 170
LF+ M M + + LG
Sbjct: 309 LGLFRGMLMSGIRPNQVTFLGALDACSDLATLCEGKQVHQMICKTAFQVDTFVGSALMNV 368
Query: 171 LGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSL 230
+ GEV AR +FD REKD +W+G+I Y G +E I L+ MQ G R N +
Sbjct: 369 YAKCGEVGLARKLFDLSREKDLISWNGIIAAYAHHGVGIEAIHLYEKMQGNGYRPNDVTY 428
Query: 231 ISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVA----SVLITMYIKCGELVKGKLIFD 286
+ +LS C+ +D G ++ +V D + V + LI + + G L K +
Sbjct: 429 VVLLSACSHSGLVDEGLKIFESMVN---DRSIAVRDEHYTCLIDLCSRAGRLDDAKRLIH 485
Query: 287 NFASKDI--VMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSAC-SYTGK 343
K +W++++ G + G +S+ PD+ +LS + GK
Sbjct: 486 YLKIKPASGSVWSALLGGCNAH--GNESIGNLAARNLIQAEPDNAGTYTLLSNIYASAGK 543
Query: 344 VKEGREIFESMKSKYL 359
KE EI M ++ L
Sbjct: 544 WKEAAEIRSEMNNRGL 559
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 108/251 (43%), Gaps = 48/251 (19%)
Query: 165 NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVR 224
N +I+ L G V AR +FD E+D +W+ ++ Y R+G + D +L + R
Sbjct: 44 NRLIVDLAAAGRVWDARKLFDGTPERDVVSWTALVSAYARRGM---LRDARSLFDRSDAR 100
Query: 225 VNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLI 284
N V + L++ Y + G + + +++
Sbjct: 101 RN-----------------------------------VVTWTALLSGYARAGLVDEAEVL 125
Query: 285 FDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKV 344
F +++V WN+++ YA G + +F M + D + +L+ +G V
Sbjct: 126 FQRMPQRNVVSWNTMLEAYAVAGRAGDACALFDRM----PVRDAGSWNILLAMLVRSGSV 181
Query: 345 KEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLG 404
+ RE+F M + ++ + MVD + R+G V++A L ++MP E + + W +++
Sbjct: 182 DKARELFGRMPERDVMA-----WTTMVDGVARSGNVDEARLLFDSMP-ERNVVSWNAMIS 235
Query: 405 ACRTHMKLDLA 415
+ +LD A
Sbjct: 236 GYTRNHRLDEA 246
>gi|413922867|gb|AFW62799.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 882
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 234/618 (37%), Positives = 355/618 (57%), Gaps = 19/618 (3%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEK----NVVSWTVMLGGFIRDSRIDDA 56
MP +VVSW A + G V G A L QM NV + + +L +
Sbjct: 266 MPAADVVSWNAFISGCVTHGHDHRALELLLQMKSSGLVPNVFTLSSVLKACAGAGAFNLG 325
Query: 57 RRLFDMM----PEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
R++ M + D +V Y + G +D+ R++FD MP++++I W +ISG ++
Sbjct: 326 RQIHGFMVKAVADFDEFVAVGLVDMYAKHGFLDDARKVFDFMPRRDLILWNALISGCSHD 385
Query: 113 NRIDVARKLFEVMPEK------NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNS 166
R LF M ++ N + ++L I ++ +++ +
Sbjct: 386 GRHGEVLSLFHRMRKEGLDLDVNRTTLASVLKSTASSEAICHTRQVHALAEKIGLLSDSH 445
Query: 167 MILGLGQN----GEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEG 222
+I GL + G++ A VF + R D + + M+ + + + I LF M ++G
Sbjct: 446 VINGLIDSYWKCGQLDYAIKVFKESRSDDIISSTTMMTALSQCDHGEDAIKLFVQMLRKG 505
Query: 223 VRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGK 282
+ + L S+L+ C SL++ + G+QVHA L++ QF DV+ + L+ Y KCG +
Sbjct: 506 LEPDSFVLSSLLNACTSLSAYEQGKQVHAHLIKRQFTSDVFAGNALVYAYAKCGSIEDAD 565
Query: 283 LIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTG 342
+ F + IV W+++I G AQ+G G+++L +FH M GV P+ +TL VLSAC++ G
Sbjct: 566 MAFSGLPERGIVSWSAMIGGLAQHGHGKRALDLFHRMLDEGVAPNHITLTSVLSACNHAG 625
Query: 343 KVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSL 402
V + ++ FESMK + ++ EHYACM+D+LGRAG++EDAM+L+ MPF+ +A +WG+L
Sbjct: 626 LVDDAKKYFESMKETFGIDRTEEHYACMIDILGRAGKLEDAMELVNNMPFQANAAVWGAL 685
Query: 403 LGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVI 462
LGA R H +L +AA+KL LEP+ +G ++LL+N YAS G + ++A++RK M+ NV
Sbjct: 686 LGASRVHRDPELGRMAAEKLFTLEPEKSGTHVLLANTYASAGMWDEMAKVRKLMKDSNVK 745
Query: 463 KPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDE 522
K P SW+E++ KVH F D SHP I L ++G L+ +AGY P+ LHDVD
Sbjct: 746 KEPAMSWVEIKDKVHTFIVGD-KSHPMTRDIYGKLAELGDLMNKAGYVPNVEVDLHDVDR 804
Query: 523 EEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRD 582
EK L +HSE+LAVA+ L+ P G PIRV KNLR+C DCH A K ISK++ REII+RD
Sbjct: 805 SEKELLLSHHSERLAVAFALISTPSGAPIRVKKNLRICRDCHVAFKYISKIVSREIIIRD 864
Query: 583 ANRFHHFKDGLCSCRDYW 600
NRFHHF +G CSC DYW
Sbjct: 865 INRFHHFTNGTCSCGDYW 882
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 96/329 (29%), Positives = 161/329 (48%), Gaps = 11/329 (3%)
Query: 87 GREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEK----NEVSWTAMLMGYTQ 142
R +FDE+P +SW+++++ Y NN A F M + NE + +L
Sbjct: 56 ARAVFDEIPDPCHVSWSSLVTAYSNNGMPRDALLAFRAMRGRGVPCNEFALPVVLKCAPD 115
Query: 143 CGRIQDAWELFKAMPM-KSVVASNSMILGLGQNGEVQKARVVFDQM----REKDDATWSG 197
L A + V +N+++ G G V +AR +FD+ E++ +W+
Sbjct: 116 VRFGAQVHALAVATRLVHDVFVANALVAVYGGFGMVDEARRMFDEYVGVGGERNAVSWNT 175
Query: 198 MIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQ 257
MI Y + + I +F M G R N V++ C L+ GRQVH +VR
Sbjct: 176 MISAYVKNDQSGDAIGVFREMVWSGERPNEFGFSCVVNACTGSRDLEAGRQVHGAVVRTG 235
Query: 258 FDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFH 317
++ DV+ A+ L+ MY K G++ +F+ + D+V WN+ ISG +G ++L++
Sbjct: 236 YEKDVFTANALVDMYSKLGDIEMAATVFEKMPAADVVSWNAFISGCVTHGHDHRALELLL 295
Query: 318 EMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRA 377
+M SSG++P+ TL VL AC+ G GR+I M K + + +VD+ +
Sbjct: 296 QMKSSGLVPNVFTLSSVLKACAGAGAFNLGRQIHGFM-VKAVADFDEFVAVGLVDMYAKH 354
Query: 378 GQVEDAMKLIEAMPFEPDAIIWGSLLGAC 406
G ++DA K+ + MP D I+W +L+ C
Sbjct: 355 GFLDDARKVFDFMP-RRDLILWNALISGC 382
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 120/465 (25%), Positives = 203/465 (43%), Gaps = 62/465 (13%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIR---DSRIDDAR 57
+P+ VSW+++V Y GM +A F M + V L ++ D R
Sbjct: 63 IPDPCHVSWSSLVTAYSNNGMPRDALLAFRAMRGRGVPCNEFALPVVLKCAPDVRFGAQV 122
Query: 58 RLFDMMPE--KDVVAQTNMVLGYCQDGRVDEGREIFDEM----PKKNVISWTTMISGYVN 111
+ DV +V Y G VDE R +FDE ++N +SW TMIS YV
Sbjct: 123 HALAVATRLVHDVFVANALVAVYGGFGMVDEARRMFDEYVGVGGERNAVSWNTMISAYVK 182
Query: 112 NNR----IDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPM----KSVVA 163
N++ I V R++ NE ++ ++ T ++ ++ A+ K V
Sbjct: 183 NDQSGDAIGVFREMVWSGERPNEFGFSCVVNACTGSRDLEAGRQVHGAVVRTGYEKDVFT 242
Query: 164 SNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGV 223
+N+++ + G+++ A VF++M D +W+ I G++ ++L M+ G+
Sbjct: 243 ANALVDMYSKLGDIEMAATVFEKMPAADVVSWNAFISGCVTHGHDHRALELLLQMKSSGL 302
Query: 224 RVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKL 283
N +L SVL CA + + GRQ+H +V+ D D +VA L+ MY K G L +
Sbjct: 303 VPNVFTLSSVLKACAGAGAFNLGRQIHGFMVKAVADFDEFVAVGLVDMYAKHGFLDDARK 362
Query: 284 IFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPD--DVTLVGVLSACSYT 341
+FD +D+++WN++ISG + G + L +FH M G+ D TL VL + + +
Sbjct: 363 VFDFMPRRDLILWNALISGCSHDGRHGEVLSLFHRMRKEGLDLDVNRTTLASVLKSTASS 422
Query: 342 -----------------------------------GKVKEGREIFESMKSKYLVEPKTEH 366
G++ ++F+ +S ++ T
Sbjct: 423 EAICHTRQVHALAEKIGLLSDSHVINGLIDSYWKCGQLDYAIKVFKESRSDDIISSTT-- 480
Query: 367 YACMVDLLGRAGQVEDAMKLIEAM---PFEPDAIIWGSLLGACRT 408
M+ L + EDA+KL M EPD+ + SLL AC +
Sbjct: 481 ---MMTALSQCDHGEDAIKLFVQMLRKGLEPDSFVLSSLLNACTS 522
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 119/235 (50%), Gaps = 11/235 (4%)
Query: 180 ARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCAS 239
AR VFD++ + +WS ++ Y G + + F M+ GV N +L VL CA
Sbjct: 56 ARAVFDEIPDPCHVSWSSLVTAYSNNGMPRDALLAFRAMRGRGVPCNEFALPVVLK-CAP 114
Query: 240 LASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNF----ASKDIVM 295
+ G QVHA V + DV+VA+ L+ +Y G + + + +FD + ++ V
Sbjct: 115 --DVRFGAQVHALAVATRLVHDVFVANALVAVYGGFGMVDEARRMFDEYVGVGGERNAVS 172
Query: 296 WNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFES-M 354
WN++IS Y + ++ VF EM SG P++ V++AC+ + ++ GR++ + +
Sbjct: 173 WNTMISAYVKNDQSGDAIGVFREMVWSGERPNEFGFSCVVNACTGSRDLEAGRQVHGAVV 232
Query: 355 KSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTH 409
++ Y + T + +VD+ + G +E A + E MP D + W + + C TH
Sbjct: 233 RTGYEKDVFTAN--ALVDMYSKLGDIEMAATVFEKMP-AADVVSWNAFISGCVTH 284
Score = 43.5 bits (101), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 79/177 (44%), Gaps = 9/177 (5%)
Query: 232 SVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASK 291
S L+ + SL G +H+ L++ ++ L+T+Y +C + +FD
Sbjct: 9 SALARFGTSRSLFAGAHLHSHLLKSGLLAGF--SNHLLTLYSRCRLPSAARAVFDEIPDP 66
Query: 292 DIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIF 351
V W+S+++ Y+ G+ +L F M GV ++ L VL V+ G ++
Sbjct: 67 CHVSWSSLVTAYSNNGMPRDALLAFRAMRGRGVPCNEFALPVVLKCAP---DVRFGAQVH 123
Query: 352 ESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIE---AMPFEPDAIIWGSLLGA 405
+ LV A +V + G G V++A ++ + + E +A+ W +++ A
Sbjct: 124 ALAVATRLVHDVFVANA-LVAVYGGFGMVDEARRMFDEYVGVGGERNAVSWNTMISA 179
>gi|225439325|ref|XP_002267596.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Vitis vinifera]
Length = 623
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 225/558 (40%), Positives = 346/558 (62%), Gaps = 9/558 (1%)
Query: 51 SRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVI----SWTTMI 106
S ID A R+F + ++ M+ G+ D+ + + ++ ++ ++ ++
Sbjct: 67 SLIDYASRIFSQIQNPNLFIFNAMIRGHSGSKNPDQAFHFYVQSQRQGLLPDNLTFPFLV 126
Query: 107 SGYVNNNRIDVARK----LFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVV 162
+ I + + + + EK+ +++ Y G + A +F+ M VV
Sbjct: 127 KSCTKLHCISMGSQAHGHIIKHGFEKDVYVQNSLVHMYATFGDTEAATLIFQRMYYVDVV 186
Query: 163 ASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEG 222
+ SMI G + G+V+ AR +FDQM EK+ TWS MI Y + + + ++LF ++Q +G
Sbjct: 187 SWTSMIRGFNKCGDVESARKLFDQMPEKNLVTWSTMISGYAQNNHFDKAVELFKVLQSQG 246
Query: 223 VRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGK 282
VR N ++SV+S CA L +L+ G + H +V+ +++ + + L+ MY +CG + K
Sbjct: 247 VRANETVMVSVISSCAHLGALELGERAHDYVVKNGMTLNLILGTALVDMYARCGSIDKAV 306
Query: 283 LIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTG 342
+F++ +D + W ++I+G A +G E+SLK F M +G+ P D+T VLSACS+ G
Sbjct: 307 WVFEDLPERDTLSWTALIAGLAMHGYSERSLKYFATMVEAGLTPRDITFTAVLSACSHGG 366
Query: 343 KVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSL 402
V+ G +IFESMK + VEP+ EHY CMVDLLGRAG++E+A + + MP +P+A +WG+L
Sbjct: 367 LVERGFQIFESMKRDHRVEPRLEHYGCMVDLLGRAGKLEEAERFVLKMPVKPNAPVWGAL 426
Query: 403 LGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVI 462
LGACR H ++ E K L+QL P+++G Y+LLSNIYA+ + V E+R+ M+ + +
Sbjct: 427 LGACRIHKNAEIGERVGKILIQLLPQHSGYYVLLSNIYANAKEWEKVTEMRQMMKAKGLK 486
Query: 463 KPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDE 522
KPPG S IE++ +VH FT D SHPE I RM E+I +R AGY +++ L D+DE
Sbjct: 487 KPPGHSLIELDGRVHKFTIGDS-SHPEMDKIERMWEEILMRIRAAGYRGNTADALFDIDE 545
Query: 523 EEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRD 582
EEK +L HSEKLA+A+G+++ G PIR++KNLRVC DCH+A KLISKV GRE+I+RD
Sbjct: 546 EEKESALHRHSEKLAIAFGMMRSEAGTPIRIVKNLRVCEDCHTATKLISKVFGRELIVRD 605
Query: 583 ANRFHHFKDGLCSCRDYW 600
NRFHHF+ GLCSC DYW
Sbjct: 606 RNRFHHFRQGLCSCMDYW 623
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 113/233 (48%), Gaps = 14/233 (6%)
Query: 34 EKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDE 93
EK+V ++ + + A +F M DVV+ T+M+ G+ + G V+ R++FD+
Sbjct: 151 EKDVYVQNSLVHMYATFGDTEAATLIFQRMYYVDVVSWTSMIRGFNKCGDVESARKLFDQ 210
Query: 94 MPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKN-EVSWTAMLMGYTQCGRIQDAWEL 152
MP+KN+++W+TMISGY NN D A +LF+V+ + + T M+ + C + A EL
Sbjct: 211 MPEKNLVTWSTMISGYAQNNHFDKAVELFKVLQSQGVRANETVMVSVISSCAHL-GALEL 269
Query: 153 FKAMPMKSVVASNSMILGL----------GQNGEVQKARVVFDQMREKDDATWSGMIKVY 202
V N M L L + G + KA VF+ + E+D +W+ +I
Sbjct: 270 --GERAHDYVVKNGMTLNLILGTALVDMYARCGSIDKAVWVFEDLPERDTLSWTALIAGL 327
Query: 203 ERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVR 255
GY + F M + G+ + +VLS C+ ++ G Q+ + R
Sbjct: 328 AMHGYSERSLKYFATMVEAGLTPRDITFTAVLSACSHGGLVERGFQIFESMKR 380
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 133/302 (44%), Gaps = 53/302 (17%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQ-MPEKNVVSWTVMLGGFIRDSRIDDARRLFD 61
E++V ++V Y G TEA TL +Q M +VVSWT M+ GF + ++ AR+LFD
Sbjct: 151 EKDVYVQNSLVHMYATFG-DTEAATLIFQRMYYVDVVSWTSMIRGFNKCGDVESARKLFD 209
Query: 62 MMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKK------------------------ 97
MPEK++V + M+ GY Q+ D+ E+F + +
Sbjct: 210 QMPEKNLVTWSTMISGYAQNNHFDKAVELFKVLQSQGVRANETVMVSVISSCAHLGALEL 269
Query: 98 ---------------NVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQ 142
N+I T ++ Y ID A +FE +PE++ +SWTA++ G
Sbjct: 270 GERAHDYVVKNGMTLNLILGTALVDMYARCGSIDKAVWVFEDLPERDTLSWTALIAGLAM 329
Query: 143 CGRIQDAWELFKAMPMKSV----VASNSMILGLGQNGEVQKARVVFDQMR-----EKDDA 193
G + + + F M + + +++ G V++ +F+ M+ E
Sbjct: 330 HGYSERSLKYFATMVEAGLTPRDITFTAVLSACSHGGLVERGFQIFESMKRDHRVEPRLE 389
Query: 194 TWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQL 253
+ M+ + R G +LE + F L K V+ N P ++L C + + G +V L
Sbjct: 390 HYGCMVDLLGRAG-KLEEAERFVL--KMPVKPNAPVWGALLGACRIHKNAEIGERVGKIL 446
Query: 254 VR 255
++
Sbjct: 447 IQ 448
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 107/217 (49%), Gaps = 18/217 (8%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRD----SRIDDA 56
MPE+N+V+W+ M+ GY + +A LF + + V + ++ I ++
Sbjct: 211 MPEKNLVTWSTMISGYAQNNHFDKAVELFKVLQSQGVRANETVMVSVISSCAHLGALELG 270
Query: 57 RRLFDMMPEK----DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
R D + + +++ T +V Y + G +D+ +F+++P+++ +SWT +I+G +
Sbjct: 271 ERAHDYVVKNGMTLNLILGTALVDMYARCGSIDKAVWVFEDLPERDTLSWTALIAGLAMH 330
Query: 113 NRIDVARKLFEVMPEKN----EVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVAS---- 164
+ + K F M E ++++TA+L + G ++ +++F++M V
Sbjct: 331 GYSERSLKYFATMVEAGLTPRDITFTAVLSACSHGGLVERGFQIFESMKRDHRVEPRLEH 390
Query: 165 -NSMILGLGQNGEVQKARVVFDQMREKDDA-TWSGMI 199
M+ LG+ G++++A +M K +A W ++
Sbjct: 391 YGCMVDLLGRAGKLEEAERFVLKMPVKPNAPVWGALL 427
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 104/243 (42%), Gaps = 13/243 (5%)
Query: 223 VRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGE----L 278
+R+ P L S L C+ L H + +HA ++R DV+ AS LI + +
Sbjct: 14 LRLKNPKLFS-LETCSDLT---HLKIIHAYMIRTHIICDVFAASRLIAFCVDPSSGTSLI 69
Query: 279 VKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSAC 338
IF + ++ ++N++I G++ +++ + + G++PD++T ++ +C
Sbjct: 70 DYASRIFSQIQNPNLFIFNAMIRGHSGSKNPDQAFHFYVQSQRQGLLPDNLTFPFLVKSC 129
Query: 339 SYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAII 398
+ + G + + K+ E +V + G E A + + M + D +
Sbjct: 130 TKLHCISMGSQAHGHI-IKHGFEKDVYVQNSLVHMYATFGDTEAATLIFQRM-YYVDVVS 187
Query: 399 WGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRK 458
W S++ R K E A K Q+ KN + + + YA F EL K ++
Sbjct: 188 WTSMI---RGFNKCGDVESARKLFDQMPEKNLVTWSTMISGYAQNNHFDKAVELFKVLQS 244
Query: 459 RNV 461
+ V
Sbjct: 245 QGV 247
>gi|119638439|gb|ABL85030.1| hypothetical protein 57h21.3 [Brachypodium sylvaticum]
Length = 618
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 208/516 (40%), Positives = 318/516 (61%), Gaps = 1/516 (0%)
Query: 4 RNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMM 63
RNVV+WTA++ GY G + EA LF +MPE+NVVSW ML + R+ DA LFD M
Sbjct: 96 RNVVTWTALLSGYARAGRVDEAEALFQRMPERNVVSWNTMLEAYTSAGRVRDAWTLFDGM 155
Query: 64 PEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFE 123
P +D + ++ + G +D+ R++FD MP++NV++WTTM++G + +D AR LF+
Sbjct: 156 PVRDAGSWNILLAALVRSGNMDKARKLFDRMPERNVMAWTTMVAGIARSGSVDEARALFD 215
Query: 124 VMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVV 183
MPE+N VSW AM+ GY + RI +A +LF MP + + + N MI G Q+ ++++A+ +
Sbjct: 216 GMPERNVVSWNAMISGYARNHRIDEAHDLFMKMPTRDIASWNIMITGFIQDRDLERAQDL 275
Query: 184 FDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASL 243
FD+M ++ TW+ M+ Y + + +F M EG+R N + + + C++LA L
Sbjct: 276 FDKMPRRNVITWTTMMNGYLQSMQSETALQIFNGMLVEGIRPNQVTFLGAVDACSNLAGL 335
Query: 244 DHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGY 303
G+QVH + + F D ++ S L+ +Y KCGE+ + +FD KD++ WN +I+ Y
Sbjct: 336 SEGQQVHQMICKTSFQFDTFIESTLMNLYAKCGEIRLARKVFDLSKEKDVISWNGMIAAY 395
Query: 304 AQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPK 363
A +G+G +++ ++ +M G P+DVT VG+LSACS++G V EG IFE M + +
Sbjct: 396 AHHGVGVEAIHLYEKMQEKGYKPNDVTYVGLLSACSHSGLVDEGLRIFEYMVKDRSIAVR 455
Query: 364 TEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLL 423
EHY C++DL RAG++ DA +LI + EP + +W +LLG C +H + ++AA+ LL
Sbjct: 456 DEHYTCLIDLCSRAGRLGDAKRLIHFLKVEPSSTVWNALLGGCNSHGNESIGDLAARNLL 515
Query: 424 QLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRD 483
+ EP NAG Y LL NIYAS G++ + A++R M R + K PGCSWIEVE KVH+F RD
Sbjct: 516 EAEPNNAGTYTLLCNIYASAGKWKEAAKIRSEMNDRGLKKQPGCSWIEVENKVHVFVSRD 575
Query: 484 CVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHD 519
SH E +I +L+ I ++R A P L D
Sbjct: 576 -KSHSESDLINSLLQDIHDIMRMACTVPRDDMQLID 610
Score = 209 bits (531), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 112/359 (31%), Positives = 198/359 (55%), Gaps = 11/359 (3%)
Query: 52 RIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEM-PKKNVISWTTMISGYV 110
R+ DARRLFD P++DVV+ T +V Y + G + + R +FD ++NV++WT ++SGY
Sbjct: 50 RVSDARRLFDRTPDRDVVSWTALVAAYARQGMLHDARALFDRPDARRNVVTWTALLSGYA 109
Query: 111 NNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILG 170
R+D A LF+ MPE+N VSW ML YT GR++DAW LF MP++ + N ++
Sbjct: 110 RAGRVDEAEALFQRMPERNVVSWNTMLEAYTSAGRVRDAWTLFDGMPVRDAGSWNILLAA 169
Query: 171 LGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSL 230
L ++G + KAR +FD+M E++ W+ M+ R G E LF M + N S
Sbjct: 170 LVRSGNMDKARKLFDRMPERNVMAWTTMVAGIARSGSVDEARALFDGMPER----NVVSW 225
Query: 231 ISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFAS 290
+++S A +D + ++ D+ +++IT +I+ +L + + +FD
Sbjct: 226 NAMISGYARNHRIDEAHDLFMKMP----TRDIASWNIMITGFIQDRDLERAQDLFDKMPR 281
Query: 291 KDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREI 350
++++ W ++++GY Q E +L++F+ M G+ P+ VT +G + ACS + EG+++
Sbjct: 282 RNVITWTTMMNGYLQSMQSETALQIFNGMLVEGIRPNQVTFLGAVDACSNLAGLSEGQQV 341
Query: 351 FESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTH 409
+ M K + T + +++L + G++ A K+ + + E D I W ++ A H
Sbjct: 342 HQ-MICKTSFQFDTFIESTLMNLYAKCGEIRLARKVFD-LSKEKDVISWNGMIAAYAHH 398
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 98/227 (43%), Gaps = 16/227 (7%)
Query: 165 NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVR 224
N + L G V AR +FD+ ++D +W+ ++ Y R+G + D L + R
Sbjct: 39 NRRVAELAAAGRVSDARRLFDRTPDRDVVSWTALVAAYARQGM---LHDARALFDRPDAR 95
Query: 225 VNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLI 284
N + ++LS A +D + ++ + +V + ++ Y G + +
Sbjct: 96 RNVVTWTALLSGYARAGRVDEAEALFQRMP----ERNVVSWNTMLEAYTSAGRVRDAWTL 151
Query: 285 FDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKV 344
FD +D WN +++ + G +K+ K+F M VM + G+ + +G V
Sbjct: 152 FDGMPVRDAGSWNILLAALVRSGNMDKARKLFDRMPERNVMAWTTMVAGI----ARSGSV 207
Query: 345 KEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMP 391
E R +F+ M + +V + M+ R ++++A L MP
Sbjct: 208 DEARALFDGMPERNVVS-----WNAMISGYARNHRIDEAHDLFMKMP 249
>gi|224137958|ref|XP_002322694.1| predicted protein [Populus trichocarpa]
gi|222867324|gb|EEF04455.1| predicted protein [Populus trichocarpa]
Length = 586
Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust.
Identities = 234/585 (40%), Positives = 353/585 (60%), Gaps = 17/585 (2%)
Query: 31 QMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEK----DVVAQTNMVLGYCQDGRVDE 86
Q PE + ++L + + + +R+ M + V T +++ Y + +
Sbjct: 4 QGPEIKFDGYNMLLNECVNKRAVREGQRVHAHMIKTCYLPPVYLSTRLIILYTKCECLGC 63
Query: 87 GREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVM----PEKNEVSWTAMLMGYT- 141
R +FDEM ++NV+SWT MISGY A LF M E NE ++ +L T
Sbjct: 64 ARHVFDEMRERNVVSWTAMISGYSQRGFASEALHLFVQMLRSDTEPNEFTFATVLSSCTG 123
Query: 142 ----QCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSG 197
+ GR Q +FK + +S++ + G + +AR VF+ + E+D + +
Sbjct: 124 FSGFELGR-QIHSHIFKRNYENHIFVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTA 182
Query: 198 MIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQ 257
+I Y + G + E ++LF +Q+EG+ N+ + S+L+ + LA+LDHG+QVH+ ++RC+
Sbjct: 183 IISGYAQLGLDEEALELFCRLQREGMSSNYVTYASLLTALSGLAALDHGKQVHSHVLRCE 242
Query: 258 FDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFH 317
V + + LI MY KCG L + IF+N + ++ WN+++ GY+++G G + +K+F
Sbjct: 243 LPFYVVLQNSLIDMYSKCGNLNYARKIFNNMPVRTVISWNAMLVGYSKHGKGIEVVKLFK 302
Query: 318 EMFSSG-VMPDDVTLVGVLSACSYTGKVKEGREIF-ESMKSKYLVEPKTEHYACMVDLLG 375
M V PD VT + VLS CS+ G +G E+F E M +E EHY C++DLLG
Sbjct: 303 LMREENKVKPDSVTFLAVLSGCSHGGLEDKGLEMFDEMMNGGDEIEAGIEHYGCVIDLLG 362
Query: 376 RAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYIL 435
RAG+VE+A +LI+ MPFEP A IWGSLLGACR H ++ E +LL++EP+NAG Y++
Sbjct: 363 RAGRVEEAFELIKKMPFEPTAAIWGSLLGACRVHSNTNIGEFVGCRLLEIEPENAGNYVI 422
Query: 436 LSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMR 495
LSN+YAS GR+ DV +R+ M ++ VIK PG SWIE+++ +H F D SHP +
Sbjct: 423 LSNLYASAGRWEDVRNVRELMMEKAVIKEPGRSWIELDQTIHTFYASD-RSHPRREEVFL 481
Query: 496 MLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMK 555
+ ++ +E+GY PD S VL+DVDEE+K L HSEKLA+A+GL+ EGVP+RV+K
Sbjct: 482 KVRELLVKFKESGYVPDQSCVLYDVDEEQKEKILLGHSEKLALAFGLISTSEGVPLRVIK 541
Query: 556 NLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
NLR+C DCH+ K +SKV GR++ +RD NRFHH G+CSC DYW
Sbjct: 542 NLRICVDCHNFAKFVSKVYGRQVSIRDKNRFHHVAGGICSCGDYW 586
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 138/272 (50%), Gaps = 19/272 (6%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM----PEKNVVSWTVMLGGFIRDSRIDDA 56
M ERNVVSWTAM+ GY + G +EA LF QM E N ++ +L S +
Sbjct: 71 MRERNVVSWTAMISGYSQRGFASEALHLFVQMLRSDTEPNEFTFATVLSSCTGFSGFELG 130
Query: 57 RR----LFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
R+ +F E + ++++ Y + GR+ E R +F+ +P+++V+S T +ISGY
Sbjct: 131 RQIHSHIFKRNYENHIFVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAIISGYAQL 190
Query: 113 NRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFK-----AMPMKSVVA 163
+ A +LF + + N V++ ++L + + ++ +P VV
Sbjct: 191 GLDEEALELFCRLQREGMSSNYVTYASLLTALSGLAALDHGKQVHSHVLRCELPF-YVVL 249
Query: 164 SNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEG- 222
NS+I + G + AR +F+ M + +W+ M+ Y + G +EV+ LF LM++E
Sbjct: 250 QNSLIDMYSKCGNLNYARKIFNNMPVRTVISWNAMLVGYSKHGKGIEVVKLFKLMREENK 309
Query: 223 VRVNFPSLISVLSVCASLASLDHGRQVHAQLV 254
V+ + + ++VLS C+ D G ++ +++
Sbjct: 310 VKPDSVTFLAVLSGCSHGGLEDKGLEMFDEMM 341
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 111/210 (52%), Gaps = 7/210 (3%)
Query: 218 MQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGE 277
M +G + F +L+ C + ++ G++VHA +++ + VY+++ LI +Y KC
Sbjct: 1 MAIQGPEIKFDGYNMLLNECVNKRAVREGQRVHAHMIKTCYLPPVYLSTRLIILYTKCEC 60
Query: 278 LVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSA 337
L + +FD +++V W ++ISGY+Q G ++L +F +M S P++ T VLS+
Sbjct: 61 LGCARHVFDEMRERNVVSWTAMISGYSQRGFASEALHLFVQMLRSDTEPNEFTFATVLSS 120
Query: 338 CSYTGKVKEGREIFESM-KSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDA 396
C+ + GR+I + K Y E + ++D+ +AG++ +A + E +P E D
Sbjct: 121 CTGFSGFELGRQIHSHIFKRNY--ENHIFVGSSLLDMYAKAGRIHEARGVFECLP-ERDV 177
Query: 397 IIWGSLLGACRTHMKLDLAEVAAKKLLQLE 426
+ +++ + +L L E A + +L+
Sbjct: 178 VSCTAIISG---YAQLGLDEEALELFCRLQ 204
>gi|225432688|ref|XP_002282622.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14850-like [Vitis vinifera]
Length = 684
Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust.
Identities = 242/618 (39%), Positives = 347/618 (56%), Gaps = 21/618 (3%)
Query: 2 PERNVVSWTAMVRGYVEEGMITEAGTLFWQM------PEKNVVSWTVMLGGFIRDSRIDD 55
P R+VV+WTA++ G V+ G T A F M P G +R +
Sbjct: 69 PNRSVVTWTALIAGSVQNGRFTSALFHFSNMRRDSIQPNDFTFPCAFKASGSLRSPLVGK 128
Query: 56 ARRLFDMMPEK--DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNN 113
+ + DV + Y + G +E R++FDEMP++N+ +W +S V
Sbjct: 129 QVHALAVKAGQISDVFVGCSAFDMYSKAGLTEEARKMFDEMPERNIATWNAYLSNSVLEG 188
Query: 114 RIDVARKLFEVMP----EKNEVSWTAML-----MGYTQCGRIQDAWELFKAMPMKSVVAS 164
R D A F E N +++ A L Y + GR + L VA
Sbjct: 189 RYDDALTAFIEFRHEGWEPNLITFCAFLNACAGASYLRLGRQLHGFVLQSGFEADVSVA- 247
Query: 165 NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVR 224
N +I G+ +V + ++F + + +D +W MI Y + E + +F +KEG+
Sbjct: 248 NGLIDFYGKCHQVGCSEIIFSGISKPNDVSWCSMIVSYVQNDEEEKACLVFLRARKEGIE 307
Query: 225 VNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLI 284
+ SVLS CA L+ L+ G+ VH V+ +++V S L+ MY KCG + +
Sbjct: 308 PTDFMVSSVLSACAGLSVLEVGKSVHTLAVKACVVGNIFVGSALVDMYGKCGSIEDAERA 367
Query: 285 FDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMF--SSGVMPDDVTLVGVLSACSYTG 342
FD +++V WN++I GYA G + ++ +F EM S V P+ VT V VLSACS G
Sbjct: 368 FDEMPERNLVTWNAMIGGYAHQGQADMAVTLFDEMTCGSHRVAPNYVTFVCVLSACSRAG 427
Query: 343 KVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSL 402
V G EIFESM+ +Y +EP EHYAC+VDLLGRAG VE A + I+ MP P +WG+L
Sbjct: 428 SVNVGMEIFESMRGRYGIEPGAEHYACVVDLLGRAGMVEQAYQFIKKMPIRPTVSVWGAL 487
Query: 403 LGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVI 462
LGA + K +L +VAA L +L+P ++G ++LLSN++A+ GR+ + +RK M+ +
Sbjct: 488 LGASKMFGKSELGKVAADNLFELDPLDSGNHVLLSNMFAAAGRWEEATLVRKEMKDVGIK 547
Query: 463 KPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDE 522
K GCSWI VH+F +D SH + I ML K+ G + AGY PD+SF L D++E
Sbjct: 548 KGAGCSWITAGNAVHVFQAKD-TSHERNSEIQAMLAKLRGEMEAAGYIPDTSFALFDLEE 606
Query: 523 EEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRD 582
EEK + YHSEK+A+A+GL+ +P GVPIR+ KNLR+CGDCHSAIK IS ++GREII+RD
Sbjct: 607 EEKAMEVWYHSEKIALAFGLISIPAGVPIRITKNLRICGDCHSAIKFISGIVGREIIVRD 666
Query: 583 ANRFHHFKDGLCSCRDYW 600
N FH F+D CSCRDYW
Sbjct: 667 NNLFHRFRDNQCSCRDYW 684
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 102/405 (25%), Positives = 186/405 (45%), Gaps = 15/405 (3%)
Query: 72 TNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMP----E 127
++V Y + R + + + P ++V++WT +I+G V N R A F M +
Sbjct: 46 NHLVNMYSKLDRPNSAQLLLSLTPNRSVVTWTALIAGSVQNGRFTSALFHFSNMRRDSIQ 105
Query: 128 KNEVSWTAMLMGYTQ-----CGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARV 182
N+ ++ G+ A + KA + V S + G ++AR
Sbjct: 106 PNDFTFPCAFKASGSLRSPLVGKQVHALAV-KAGQISDVFVGCSAFDMYSKAGLTEEARK 164
Query: 183 VFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLAS 242
+FD+M E++ ATW+ + +G + + F + EG N + + L+ CA +
Sbjct: 165 MFDEMPERNIATWNAYLSNSVLEGRYDDALTAFIEFRHEGWEPNLITFCAFLNACAGASY 224
Query: 243 LDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISG 302
L GRQ+H +++ F+ DV VA+ LI Y KC ++ ++IF + + V W S+I
Sbjct: 225 LRLGRQLHGFVLQSGFEADVSVANGLIDFYGKCHQVGCSEIIFSGISKPNDVSWCSMIVS 284
Query: 303 YAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEP 362
Y Q EK+ VF G+ P D + VLSAC+ ++ G+ + ++ K V
Sbjct: 285 YVQNDEEEKACLVFLRARKEGIEPTDFMVSSVLSACAGLSVLEVGKSV-HTLAVKACVVG 343
Query: 363 KTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKL 422
+ +VD+ G+ G +EDA + + MP E + + W +++G + D+A ++
Sbjct: 344 NIFVGSALVDMYGKCGSIEDAERAFDEMP-ERNLVTWNAMIGGYAHQGQADMAVTLFDEM 402
Query: 423 LQLEPKNAGPYILLSNIYASQGRFHDVA---ELRKNMRKRNVIKP 464
+ A Y+ + ++ R V E+ ++MR R I+P
Sbjct: 403 TCGSHRVAPNYVTFVCVLSACSRAGSVNVGMEIFESMRGRYGIEP 447
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 121/268 (45%), Gaps = 20/268 (7%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMP----EKNVVSWTVMLGGFIRDSRIDDA 56
MPERN+ +W A + V EG +A T F + E N++++ L S +
Sbjct: 169 MPERNIATWNAYLSNSVLEGRYDDALTAFIEFRHEGWEPNLITFCAFLNACAGASYLRLG 228
Query: 57 RRLFDMMP----EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
R+L + E DV ++ Y + +V IF + K N +SW +MI YV N
Sbjct: 229 RQLHGFVLQSGFEADVSVANGLIDFYGKCHQVGCSEIIFSGISKPNDVSWCSMIVSYVQN 288
Query: 113 NRIDVARKLFEVMPEKNEVSWTAMLMG--YTQCG--RIQDAWELFKAMPMKSVVASN--- 165
+ + A +F + K + T ++ + C + + + + +K+ V N
Sbjct: 289 DEEEKACLVF-LRARKEGIEPTDFMVSSVLSACAGLSVLEVGKSVHTLAVKACVVGNIFV 347
Query: 166 --SMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGV 223
+++ G+ G ++ A FD+M E++ TW+ MI Y +G + LF M
Sbjct: 348 GSALVDMYGKCGSIEDAERAFDEMPERNLVTWNAMIGGYAHQGQADMAVTLFDEMTCGSH 407
Query: 224 RV--NFPSLISVLSVCASLASLDHGRQV 249
RV N+ + + VLS C+ S++ G ++
Sbjct: 408 RVAPNYVTFVCVLSACSRAGSVNVGMEI 435
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 76/351 (21%), Positives = 148/351 (42%), Gaps = 34/351 (9%)
Query: 141 TQCGRIQDAW--ELFKAM--PMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWS 196
TQC R+ A ++ K + P+ S + N ++ + A+++ + TW+
Sbjct: 19 TQCSRLGRAAHAQIIKTLDNPLPSFI-YNHLVNMYSKLDRPNSAQLLLSLTPNRSVVTWT 77
Query: 197 GMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRC 256
+I + G + F+ M+++ ++ N + SL S G+QVHA V+
Sbjct: 78 ALIAGSVQNGRFTSALFHFSNMRRDSIQPNDFTFPCAFKASGSLRSPLVGKQVHALAVKA 137
Query: 257 QFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVF 316
DV+V MY K G + + +FD ++I WN+ +S G + +L F
Sbjct: 138 GQISDVFVGCSAFDMYSKAGLTEEARKMFDEMPERNIATWNAYLSNSVLEGRYDDALTAF 197
Query: 317 HEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFE-SMKSKYLVEPKTEHYACMVDLLG 375
E G P+ +T L+AC+ ++ GR++ ++S + E ++D G
Sbjct: 198 IEFRHEGWEPNLITFCAFLNACAGASYLRLGRQLHGFVLQSGF--EADVSVANGLIDFYG 255
Query: 376 RAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPY-I 434
+ QV ++I + +P+ + W S++ ++++ D E A L+ + P
Sbjct: 256 KCHQV-GCSEIIFSGISKPNDVSWCSMI---VSYVQNDEEEKACLVFLRARKEGIEPTDF 311
Query: 435 LLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCV 485
++S++ ++ G S +EV K VH + CV
Sbjct: 312 MVSSVLSACA---------------------GLSVLEVGKSVHTLAVKACV 341
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 78/176 (44%), Gaps = 25/176 (14%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMP------EKNVVSWTVMLGGFIRDSRID 54
MPERN+V+W AM+ GY +G A TLF +M N V++ +L R ++
Sbjct: 371 MPERNLVTWNAMIGGYAHQGQADMAVTLFDEMTCGSHRVAPNYVTFVCVLSACSRAGSVN 430
Query: 55 DARRLFDMM-------PEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVIS-WTTMI 106
+F+ M P + A +LG + G V++ + +MP + +S W ++
Sbjct: 431 VGMEIFESMRGRYGIEPGAEHYACVVDLLG--RAGMVEQAYQFIKKMPIRPTVSVWGALL 488
Query: 107 SGYVNNNRIDV----ARKLFEVMP--EKNEVSWTAMLMGYTQCGRIQDAWELFKAM 156
+ ++ A LFE+ P N V + M + GR ++A + K M
Sbjct: 489 GASKMFGKSELGKVAADNLFELDPLDSGNHVLLSNM---FAAAGRWEEATLVRKEM 541
>gi|255559863|ref|XP_002520950.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539787|gb|EEF41367.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 835
Score = 443 bits (1140), Expect = e-122, Method: Compositional matrix adjust.
Identities = 232/640 (36%), Positives = 365/640 (57%), Gaps = 52/640 (8%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF------DMM 63
A+V YV G + EA +F + K++V+W ML GFI++ +A F D+
Sbjct: 199 NALVAMYVRFGKMPEAAVIFGNLEGKDIVTWNSMLTGFIQNGLYSEALEFFYDLQNADLK 258
Query: 64 PEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKK----NVISWTTMISGYVNNNRIDVAR 119
P D V+ ++++ + G + G+EI K N++ T+I Y +
Sbjct: 259 P--DQVSIISIIVASGRLGYLLNGKEIHAYAIKNGFDSNILVGNTLIDMYAKCCCMSYGG 316
Query: 120 KLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSV------------------ 161
+ F++M K+ +SWT GY Q A EL + + M+ +
Sbjct: 317 RAFDLMAHKDLISWTTAAAGYAQNKCYLQALELLRQLQMEGMDVDATMIGSILLACRGLN 376
Query: 162 --------------------VASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKV 201
V N++I G+ G + A +F+ + KD +W+ MI
Sbjct: 377 CLGKIKEIHGYTIRGGLSDPVLQNTIIDVYGECGIIDYAVRIFESIECKDVVSWTSMISC 436
Query: 202 YERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVD 261
Y G + +++F+ M++ G+ ++ +L+S+LS SL++L G+++H ++R F ++
Sbjct: 437 YVHNGLANKALEVFSSMKETGLEPDYVTLVSILSAVCSLSTLKKGKEIHGFIIRKGFILE 496
Query: 262 VYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFS 321
+++ L+ MY +CG + IF ++++++W ++IS Y +G GE ++++F M
Sbjct: 497 GSISNTLVDMYARCGSVEDAYKIFTCTKNRNLILWTAMISAYGMHGYGEAAVELFMRMKD 556
Query: 322 SGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVE 381
++PD +T + +L ACS++G V EG+ E MK +Y +EP EHY C+VDLLGR +E
Sbjct: 557 EKIIPDHITFLALLYACSHSGLVNEGKSFLEIMKCEYQLEPWPEHYTCLVDLLGRRNCLE 616
Query: 382 DAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYA 441
+A +++++M EP +W +LLGACR H ++ EVAA+KLL+L+ N G Y+L+SN++A
Sbjct: 617 EAYQIVKSMQNEPTPEVWCALLGACRIHSNKEIGEVAAEKLLELDLDNPGNYVLVSNVFA 676
Query: 442 SQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIG 501
+ GR+ DV E+R M+ + K PGCSWIEV K+H F RD + HPE I + L ++
Sbjct: 677 ANGRWKDVEEVRMRMKGSGLTKNPGCSWIEVGNKIHAFLSRDKL-HPECDKIYQKLAQVT 735
Query: 502 -GLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVC 560
L RE GY + FVLH+V EEEKV L HSE+LA+AYGL+ EG PIRV KNLRVC
Sbjct: 736 EKLKREGGYVAQTKFVLHNVGEEEKVQMLYGHSERLAIAYGLLATAEGTPIRVTKNLRVC 795
Query: 561 GDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
GDCHS L+S+ RE+I+RDA+RFHHFKDG+CSC D+W
Sbjct: 796 GDCHSFCTLVSRFFERELIVRDASRFHHFKDGMCSCGDFW 835
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 100/375 (26%), Positives = 186/375 (49%), Gaps = 48/375 (12%)
Query: 78 YCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNR----IDVARKLFEVMPEKNEVSW 133
Y + G V + IFD+M ++++ +W M+ GYV+N +++ R++ + + ++
Sbjct: 2 YGKCGSVLDAEMIFDKMSERSIFTWNAMMGGYVSNGEALGALEMYREMRHLGVSFDSYTF 61
Query: 134 TAMLMGYTQCGRIQDAW--ELFKAMPMKS-----VVASNSMILGLGQNGEVQKARVVFDQ 186
+L CG ++D + + +K V NS++ + ++ AR +FD+
Sbjct: 62 PVLL---KACGIVEDLFCGAEIHGLAIKYGCDSFVFVVNSLVALYAKCNDINGARKLFDR 118
Query: 187 MREKDDA-TWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDH 245
M ++D +W+ +I Y G E + LF+ M K GV N + + L C + +
Sbjct: 119 MYVRNDVVSWNSIISAYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAALQACEDSSFIKL 178
Query: 246 GRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQ 305
G Q+HA +++ +DVYVA+ L+ MY++ G++ + +IF N KDIV WNS+++G+ Q
Sbjct: 179 GMQIHAAILKSGRVLDVYVANALVAMYVRFGKMPEAAVIFGNLEGKDIVTWNSMLTGFIQ 238
Query: 306 YGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIF-----ESMKSKYLV 360
GL ++L+ F+++ ++ + PD V+++ ++ A G + G+EI S LV
Sbjct: 239 NGLYSEALEFFYDLQNADLKPDQVSIISIIVASGRLGYLLNGKEIHAYAIKNGFDSNILV 298
Query: 361 -EPKTEHYA--CMVDLLGR-----------------AGQVED-----AMKLIEAMPFEP- 394
+ YA C + GR AG ++ A++L+ + E
Sbjct: 299 GNTLIDMYAKCCCMSYGGRAFDLMAHKDLISWTTAAAGYAQNKCYLQALELLRQLQMEGM 358
Query: 395 --DAIIWGSLLGACR 407
DA + GS+L ACR
Sbjct: 359 DVDATMIGSILLACR 373
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 119/464 (25%), Positives = 223/464 (48%), Gaps = 32/464 (6%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV----VSWTVMLG--GFIRDSRID 54
M ER++ +W AM+ GYV G A ++ +M V ++ V+L G + D
Sbjct: 18 MSERSIFTWNAMMGGYVSNGEALGALEMYREMRHLGVSFDSYTFPVLLKACGIVEDLFCG 77
Query: 55 DARRLFDMMPEKD--VVAQTNMVLGYCQDGRVDEGREIFDEMPKKN-VISWTTMISGYVN 111
+ D V ++V Y + ++ R++FD M +N V+SW ++IS Y
Sbjct: 78 AEIHGLAIKYGCDSFVFVVNSLVALYAKCNDINGARKLFDRMYVRNDVVSWNSIISAYSG 137
Query: 112 NNRIDVARKLFEVMPE----KNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKS-----VV 162
N A LF M + N ++ A L I+ ++ A+ +KS V
Sbjct: 138 NGMCTEALCLFSEMLKAGVVTNTYTFAAALQACEDSSFIKLGMQIHAAI-LKSGRVLDVY 196
Query: 163 ASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEG 222
+N+++ + G++ +A V+F + KD TW+ M+ + + G E ++ F +Q
Sbjct: 197 VANALVAMYVRFGKMPEAAVIFGNLEGKDIVTWNSMLTGFIQNGLYSEALEFFYDLQNAD 256
Query: 223 VRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGK 282
++ + S+IS++ L L +G+++HA ++ FD ++ V + LI MY KC + G
Sbjct: 257 LKPDQVSIISIIVASGRLGYLLNGKEIHAYAIKNGFDSNILVGNTLIDMYAKCCCMSYGG 316
Query: 283 LIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVG-VLSACSYT 341
FD A KD++ W + +GYAQ ++L++ ++ G M D T++G +L AC
Sbjct: 317 RAFDLMAHKDLISWTTAAAGYAQNKCYLQALELLRQLQMEG-MDVDATMIGSILLACRGL 375
Query: 342 GKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGS 401
+ + +EI L +P ++ ++D+ G G ++ A+++ E++ + D + W S
Sbjct: 376 NCLGKIKEIHGYTIRGGLSDPVLQN--TIIDVYGECGIIDYAVRIFESIECK-DVVSWTS 432
Query: 402 LLGACRTHMKL---DLAEVAAKKLLQLEPKNAGPYILLSNIYAS 442
++ +C H L L ++ K LEP Y+ L +I ++
Sbjct: 433 MI-SCYVHNGLANKALEVFSSMKETGLEP----DYVTLVSILSA 471
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 63/135 (46%), Gaps = 1/135 (0%)
Query: 271 MYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVT 330
MY KCG ++ ++IFD + + I WN+++ GY G +L+++ EM GV D T
Sbjct: 1 MYGKCGSVLDAEMIFDKMSERSIFTWNAMMGGYVSNGEALGALEMYREMRHLGVSFDSYT 60
Query: 331 LVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAM 390
+L AC + G EI + KY + +V L + + A KL + M
Sbjct: 61 FPVLLKACGIVEDLFCGAEI-HGLAIKYGCDSFVFVVNSLVALYAKCNDINGARKLFDRM 119
Query: 391 PFEPDAIIWGSLLGA 405
D + W S++ A
Sbjct: 120 YVRNDVVSWNSIISA 134
>gi|224138230|ref|XP_002322762.1| predicted protein [Populus trichocarpa]
gi|222867392|gb|EEF04523.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 443 bits (1140), Expect = e-121, Method: Compositional matrix adjust.
Identities = 229/601 (38%), Positives = 359/601 (59%), Gaps = 34/601 (5%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMP 64
+V + + ++ + + ++ A +F+Q+ N+ + + GF S+ D F +
Sbjct: 46 DVFAASCLISISINKNLLDYAAQVFYQIQNPNLFIYNSFIRGF-SGSKDPDKSFHFYVQS 104
Query: 65 EKDVVAQTNMVLGY-----CQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVAR 119
+++ + N+ + Q G +D G + ++ + S YV N+ + +
Sbjct: 105 KRNGLVPDNLTYPFLVKACTQKGSLDMGIQAHGQIIRHGFDS-----DVYVQNSLVTM-- 157
Query: 120 KLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQK 179
Y+ G I+ A +F+ + VV+ SM+ G ++G+V
Sbjct: 158 --------------------YSTLGDIKSASYVFRRISCLDVVSWTSMVAGYIKSGDVTS 197
Query: 180 ARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCAS 239
AR +FD+M EK+ TWS MI Y + + + I+L+ L+Q EGV N ++SV++ CA
Sbjct: 198 ARKLFDKMPEKNLVTWSVMISGYAKNSFFDKAIELYFLLQSEGVHANETVMVSVIASCAH 257
Query: 240 LASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSI 299
L +L+ G + H ++R + V++ + + L+ MY +CG + K +FD +D + W ++
Sbjct: 258 LGALELGERAHDYILRNKMTVNLILGTALVDMYARCGSIDKAIWVFDQLPGRDALSWTTL 317
Query: 300 ISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYL 359
I+G+A +G EK+L+ F M +G+ P ++T VLSACS+ G V+ G E+FESMK Y
Sbjct: 318 IAGFAMHGYAEKALEYFSRMEKAGLTPREITFTAVLSACSHGGLVERGLELFESMKRDYR 377
Query: 360 VEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAA 419
+EP+ EHY CMVDLLGRAG++ +A K + MP +P+A IWG+LLGACR H ++AE A
Sbjct: 378 IEPRLEHYGCMVDLLGRAGKLAEAEKFVNEMPMKPNAPIWGALLGACRIHKNSEIAERAG 437
Query: 420 KKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMF 479
K L++L+P+++G Y+LLSNIYA ++ +V +R+ M++R V+KPPG + E++ KVH F
Sbjct: 438 KTLIELKPEHSGYYVLLSNIYARTNKWENVENIRQMMKERGVVKPPGYTLFEMDGKVHKF 497
Query: 480 TGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVA 539
T D +HPE I RM E+I G +R AGY ++ L D+DEEEK ++ HSEKLA+A
Sbjct: 498 TIGD-KTHPEIQQIERMWEEILGKIRLAGYTGNNDDALFDIDEEEKESNIHRHSEKLAIA 556
Query: 540 YGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDY 599
Y +++ PIR++KNLRVC DCH+A KLISKV RE+I+RD NRFHHFK G CSC DY
Sbjct: 557 YAIMRTKGHDPIRIVKNLRVCEDCHTATKLISKVYERELIVRDRNRFHHFKGGACSCMDY 616
Query: 600 W 600
W
Sbjct: 617 W 617
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 112/231 (48%), Gaps = 12/231 (5%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDM 62
+ +V ++V Y G I A +F ++ +VVSWT M+ G+I+ + AR+LFD
Sbjct: 145 DSDVYVQNSLVTMYSTLGDIKSASYVFRRISCLDVVSWTSMVAGYIKSGDVTSARKLFDK 204
Query: 63 MPEKDVVAQTNMVLGYCQDGRVDEGREIF----DEMPKKNVISWTTMISGYVNNNRIDVA 118
MPEK++V + M+ GY ++ D+ E++ E N ++I+ + +++
Sbjct: 205 MPEKNLVTWSVMISGYAKNSFFDKAIELYFLLQSEGVHANETVMVSVIASCAHLGALELG 264
Query: 119 RKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQN 174
+ + + N + TA++ Y +CG I A +F +P + ++ ++I G +
Sbjct: 265 ERAHDYILRNKMTVNLILGTALVDMYARCGSIDKAIWVFDQLPGRDALSWTTLIAGFAMH 324
Query: 175 GEVQKARVVFDQMREKD----DATWSGMIKVYERKGYELEVIDLFTLMQKE 221
G +KA F +M + + T++ ++ G ++LF M+++
Sbjct: 325 GYAEKALEYFSRMEKAGLTPREITFTAVLSACSHGGLVERGLELFESMKRD 375
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 108/219 (49%), Gaps = 22/219 (10%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV-VSWTVM---LGGFIRDSRIDDA 56
MPE+N+V+W+ M+ GY + +A L++ + + V + TVM + ++
Sbjct: 205 MPEKNLVTWSVMISGYAKNSFFDKAIELYFLLQSEGVHANETVMVSVIASCAHLGALELG 264
Query: 57 RRLFDMMPEKDVVAQTNMVLG------YCQDGRVDEGREIFDEMPKKNVISWTTMISGYV 110
R D + + N++LG Y + G +D+ +FD++P ++ +SWTT+I+G+
Sbjct: 265 ERAHDYILRNKMT--VNLILGTALVDMYARCGSIDKAIWVFDQLPGRDALSWTTLIAGFA 322
Query: 111 NNNRIDVARKLFEVMPEKN----EVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVAS-- 164
+ + A + F M + E+++TA+L + G ++ ELF++M +
Sbjct: 323 MHGYAEKALEYFSRMEKAGLTPREITFTAVLSACSHGGLVERGLELFESMKRDYRIEPRL 382
Query: 165 ---NSMILGLGQNGEVQKARVVFDQMREKDDA-TWSGMI 199
M+ LG+ G++ +A ++M K +A W ++
Sbjct: 383 EHYGCMVDLLGRAGKLAEAEKFVNEMPMKPNAPIWGALL 421
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 102/236 (43%), Gaps = 32/236 (13%)
Query: 234 LSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDI 293
LS S +L H + +HA L+R DV+ AS LI++ I L +F + ++
Sbjct: 19 LSFLESCTTLSHLKIIHAHLIRAHTIFDVFAASCLISISINKNLLDYAAQVFYQIQNPNL 78
Query: 294 VMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEG------ 347
++NS I G++ +KS + + +G++PD++T ++ AC+ G + G
Sbjct: 79 FIYNSFIRGFSGSKDPDKSFHFYVQSKRNGLVPDNLTYPFLVKACTQKGSLDMGIQAHGQ 138
Query: 348 --REIFES-----------------MKSKYLVEPKTE-----HYACMVDLLGRAGQVEDA 383
R F+S +KS V + + MV ++G V A
Sbjct: 139 IIRHGFDSDVYVQNSLVTMYSTLGDIKSASYVFRRISCLDVVSWTSMVAGYIKSGDVTSA 198
Query: 384 MKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNI 439
KL + MP E + + W ++ + D A + LLQ E +A +++S I
Sbjct: 199 RKLFDKMP-EKNLVTWSVMISGYAKNSFFDKA-IELYFLLQSEGVHANETVMVSVI 252
>gi|357508407|ref|XP_003624492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499507|gb|AES80710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1125
Score = 443 bits (1140), Expect = e-121, Method: Compositional matrix adjust.
Identities = 231/619 (37%), Positives = 372/619 (60%), Gaps = 22/619 (3%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPE----KNVVSWTVMLGGFIRDSRIDDA 56
+PER+ V++ A++ GY +EG EA LF++M E ++ +L I+ I+
Sbjct: 259 IPERDSVTFNALLTGYSKEGFNREAINLFFKMQEVGYRPTEFTFAAILTAGIQLDDIEFG 318
Query: 57 RRLFDMMPEKDVVAQ---TNMVLG-YCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+++ + + + V N +L Y + RV E ++F EMP+ + IS+ +++ Y N
Sbjct: 319 QQVHGFVVKCNFVWNVFVANALLDFYSKHDRVVEASKLFYEMPEVDGISYNVLVTCYAWN 378
Query: 113 NRIDVARKLFEVM----------PEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVV 162
R+ + +LF+ + P +S A+ + +I + A+ ++
Sbjct: 379 GRVKESLELFKELQFTGFDRRNFPFATLLSIAAISLNLDIGRQIHSQTIVTDAI--SEIL 436
Query: 163 ASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEG 222
NS++ + GE +A +F + + W+ MI Y +KG + + LF MQ+
Sbjct: 437 VGNSLVDMYAKCGEFGEANRIFSDLAIQSSVPWTAMISSYVQKGLHEDGLKLFVEMQRAK 496
Query: 223 VRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGK 282
+ + + S++ CASLASL G+Q+H+ ++ + +V+ S L+ MY KCG +
Sbjct: 497 IGADAATYASIVRACASLASLTLGKQLHSHIIGSGYISNVFSGSALVDMYAKCGSIKDAL 556
Query: 283 LIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTG 342
+F ++ V WN++IS YAQ G G+ +L++F EM SG+ PD V+L+ +L ACS+ G
Sbjct: 557 QMFQEMPVRNSVSWNALISAYAQNGDGDCTLRLFEEMVRSGLQPDSVSLLSILCACSHCG 616
Query: 343 KVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSL 402
V+EG + F+SM Y + PK EHYA +D+L R G+ ++A KL+ MPFEPD I+W S+
Sbjct: 617 LVEEGLQYFDSMTRIYKLVPKKEHYASTIDMLCRGGRFDEAEKLMAQMPFEPDEIMWSSV 676
Query: 403 LGACRTHMKLDLAEVAAKKLLQLEP-KNAGPYILLSNIYASQGRFHDVAELRKNMRKRNV 461
L +C H +LA+ AA +L ++ ++A PY+ +SNIYA+ G + +V +++K MR+R V
Sbjct: 677 LNSCGIHKNQELAKKAANQLFNMKVLRDAAPYVTMSNIYAAAGEWDNVGKVKKAMRERGV 736
Query: 462 IKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVD 521
K P SW+E++ K H+FT D +HP+ IM+ L+++ + + GY PDSS LH+VD
Sbjct: 737 KKVPAYSWVEIKHKTHVFTAND-KTHPQMREIMKKLDELEEKMVKKGYKPDSSCALHNVD 795
Query: 522 EEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILR 581
EE KV SL+YHSE++A+A+ L+ PEG PI VMKNLR C DCH+AIK+ISK++ REI +R
Sbjct: 796 EEVKVESLKYHSERIAIAFALISTPEGSPILVMKNLRACTDCHAAIKVISKIVRREITVR 855
Query: 582 DANRFHHFKDGLCSCRDYW 600
D++RFHHF+DG C+CRDYW
Sbjct: 856 DSSRFHHFRDGFCTCRDYW 874
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 118/454 (25%), Positives = 228/454 (50%), Gaps = 53/454 (11%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MP +N+ S M+ GY++ G ++EA TLF M ++ V+WT+++GG+ ++++ +A LF
Sbjct: 127 MPHKNIFSTNTMIMGYIKSGNLSEARTLFDSMFQRTAVTWTMLIGGYAQNNQFREAFGLF 186
Query: 61 DMMP----EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPK----KNVISWTTMISGYVNN 112
M + D V+ ++ G+ + V+E R++ + K ++ +++ Y
Sbjct: 187 IEMGRHGIDPDHVSLATLLSGFTEFDSVNEVRQVHSHVIKLGYDSTLVVSNSLLDSYCKT 246
Query: 113 NRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAM------PMK------- 159
+ +A +LF +PE++ V++ A+L GY++ G ++A LF M P +
Sbjct: 247 RSLGLAFQLFNDIPERDSVTFNALLTGYSKEGFNREAINLFFKMQEVGYRPTEFTFAAIL 306
Query: 160 --------------------------SVVASNSMILGLGQNGEVQKARVVFDQMREKDDA 193
+V +N+++ ++ V +A +F +M E D
Sbjct: 307 TAGIQLDDIEFGQQVHGFVVKCNFVWNVFVANALLDFYSKHDRVVEASKLFYEMPEVDGI 366
Query: 194 TWSGMIKVYERKGYELEVIDLFTLMQKEGV-RVNFPSLISVLSVCASLASLDHGRQVHAQ 252
+++ ++ Y G E ++LF +Q G R NFP ++LS+ A +LD GRQ+H+Q
Sbjct: 367 SYNVLVTCYAWNGRVKESLELFKELQFTGFDRRNFP-FATLLSIAAISLNLDIGRQIHSQ 425
Query: 253 LVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKS 312
+ ++ V + L+ MY KCGE + IF + A + V W ++IS Y Q GL E
Sbjct: 426 TIVTDAISEILVGNSLVDMYAKCGEFGEANRIFSDLAIQSSVPWTAMISSYVQKGLHEDG 485
Query: 313 LKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFES-MKSKYLVEPKTEHYACMV 371
LK+F EM + + D T ++ AC+ + G+++ + S Y+ + + +V
Sbjct: 486 LKLFVEMQRAKIGADAATYASIVRACASLASLTLGKQLHSHIIGSGYISNVFSG--SALV 543
Query: 372 DLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
D+ + G ++DA+++ + MP +++ W +L+ A
Sbjct: 544 DMYAKCGSIKDALQMFQEMPVR-NSVSWNALISA 576
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 94/381 (24%), Positives = 193/381 (50%), Gaps = 16/381 (4%)
Query: 36 NVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMP 95
N ++ F++ ++ AR+LFD MP K++ + M++GY + G + E R +FD M
Sbjct: 100 NTYRSNFLVKSFLQRGDLNGARKLFDEMPHKNIFSTNTMIMGYIKSGNLSEARTLFDSMF 159
Query: 96 KKNVISWTTMISGYVNNNRIDVARKLFEVMP----EKNEVSWTAMLMGYTQCGRIQDAWE 151
++ ++WT +I GY NN+ A LF M + + VS +L G+T+ + + +
Sbjct: 160 QRTAVTWTMLIGGYAQNNQFREAFGLFIEMGRHGIDPDHVSLATLLSGFTEFDSVNEVRQ 219
Query: 152 L----FKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGY 207
+ K ++V SNS++ + + A +F+ + E+D T++ ++ Y ++G+
Sbjct: 220 VHSHVIKLGYDSTLVVSNSLLDSYCKTRSLGLAFQLFNDIPERDSVTFNALLTGYSKEGF 279
Query: 208 ELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASV 267
E I+LF MQ+ G R + ++L+ L ++ G+QVH +V+C F +V+VA+
Sbjct: 280 NREAINLFFKMQEVGYRPTEFTFAAILTAGIQLDDIEFGQQVHGFVVKCNFVWNVFVANA 339
Query: 268 LITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPD 327
L+ Y K +V+ +F D + +N +++ YA G ++SL++F E+ +G
Sbjct: 340 LLDFYSKHDRVVEASKLFYEMPEVDGISYNVLVTCYAWNGRVKESLELFKELQFTGFDRR 399
Query: 328 DVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHY---ACMVDLLGRAGQVEDAM 384
+ +LS + + + GR+I S+ +V +VD+ + G+ +A
Sbjct: 400 NFPFATLLSIAAISLNLDIGRQI----HSQTIVTDAISEILVGNSLVDMYAKCGEFGEAN 455
Query: 385 KLIEAMPFEPDAIIWGSLLGA 405
++ + + ++ W +++ +
Sbjct: 456 RIFSDLAIQ-SSVPWTAMISS 475
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 42/192 (21%), Positives = 76/192 (39%), Gaps = 43/192 (22%)
Query: 248 QVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYG 307
V A +++ F+ + Y ++ L+ +++ G+L + +FD K+I N++I GY + G
Sbjct: 87 HVDASIIKTGFNPNTYRSNFLVKSFLQRGDLNGARKLFDEMPHKNIFSTNTMIMGYIKSG 146
Query: 308 LGEKSLKVFHEMFS-------------------------------SGVMPDDVTLVGVLS 336
++ +F MF G+ PD V+L +LS
Sbjct: 147 NLSEARTLFDSMFQRTAVTWTMLIGGYAQNNQFREAFGLFIEMGRHGIDPDHVSLATLLS 206
Query: 337 ACSYTGKVKEGREIFESM-----KSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMP 391
+ V E R++ + S +V C LG A Q L +P
Sbjct: 207 GFTEFDSVNEVRQVHSHVIKLGYDSTLVVSNSLLDSYCKTRSLGLAFQ------LFNDIP 260
Query: 392 FEPDAIIWGSLL 403
E D++ + +LL
Sbjct: 261 -ERDSVTFNALL 271
>gi|347954514|gb|AEP33757.1| organelle transcript processing 82, partial [Aethionema
cordifolium]
Length = 679
Score = 443 bits (1140), Expect = e-121, Method: Compositional matrix adjust.
Identities = 236/643 (36%), Positives = 369/643 (57%), Gaps = 50/643 (7%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPE----KNVVSWTVMLGGFIRDSRIDDA 56
+ E N +SW M+RG+ A L+ M N ++ + + +
Sbjct: 38 IQEPNQLSWNTMIRGHALSSDPISALNLYVYMISLGLSPNSYTFPFLFKSCAKSKAAQEG 97
Query: 57 RRLFDMMPEK----DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+++ + + D+ T+++ Y Q+G V++ ++FD ++V+S+T MI+GY +
Sbjct: 98 KQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRDVVSYTAMITGYASR 157
Query: 113 NRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAM------PMKSVVAS-- 164
+D A+K+F+ +P K+ VSW AM+ GY + GR ++A ELF M P +S +A+
Sbjct: 158 GNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMKMDVKPDESTMATVL 217
Query: 165 -------------------------------NSMILGLGQNGEVQKARVVFDQMREKDDA 193
N++I + GE+++A +F+ ++ KD
Sbjct: 218 STCTHSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKCGEMERAHGLFEGLQYKDVI 277
Query: 194 TWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQL 253
+W+ +I Y + E + +F M K G N +++S+L CA L ++D GR +H +
Sbjct: 278 SWNTLIGGYAYINHHKEALLVFQEMLKLGETPNDVTMLSILPACAHLGAIDIGRWIHVYI 337
Query: 254 VRCQFDV--DVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEK 311
+ + + + + LI MY KCG + +FD +K + N++I G+A +G +
Sbjct: 338 DKKLKGIITNTSLQTSLIDMYAKCGNIEAANQVFDTILNKSLSSCNAMIFGFAMHGRADA 397
Query: 312 SLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMV 371
+ + M G+ PDD+T VG+LSACS+ G GR+IF+SM Y +EPK EHY CM+
Sbjct: 398 AFDLLSRMKKDGIEPDDITFVGLLSACSHAGLSDLGRKIFKSMTLDYRIEPKLEHYGCMI 457
Query: 372 DLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAG 431
DLLGR+G ++A +LI +M EPD +IWGSLL AC+ H L+L E+ A+KL+++EPKN G
Sbjct: 458 DLLGRSGLFKEAEELINSMTMEPDGVIWGSLLKACKIHKNLELGELIAQKLMKIEPKNPG 517
Query: 432 PYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHP 491
Y+LLSNIYA+ R+ DVA +R + + + K PGCS IE++ VH F D HP++
Sbjct: 518 SYVLLSNIYATSARWDDVARVRTLLNDKGLKKVPGCSSIEIDSMVHEFLIGDKF-HPQNK 576
Query: 492 MIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPI 551
I +MLE+I LL E G+ D+S VL +++EE K +L YHSEKLA+A+GL+ G +
Sbjct: 577 EIYKMLEEIDSLLAETGFVSDTSEVLQEMEEELKEGALSYHSEKLAIAFGLISTKPGTKL 636
Query: 552 RVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLC 594
R++KNLRVC +CH A KLISK+ REII RD +RFHHFKDG+C
Sbjct: 637 RIVKNLRVCRNCHEATKLISKIYKREIIARDRSRFHHFKDGMC 679
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 119/468 (25%), Positives = 206/468 (44%), Gaps = 86/468 (18%)
Query: 90 IFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVM------PEKNEVSW---------- 133
+F + + N +SW TMI G+ ++ A L+ M P +
Sbjct: 34 VFKSIQEPNQLSWNTMIRGHALSSDPISALNLYVYMISLGLSPNSYTFPFLFKSCAKSKA 93
Query: 134 -----------------------TAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILG 170
T+++ Y Q G ++DA ++F + VV+ +MI G
Sbjct: 94 AQEGKQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRDVVSYTAMITG 153
Query: 171 LGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSL 230
G + KA+ +FD++ KD +W+ MI Y G E ++LF M K V+ + ++
Sbjct: 154 YASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMKMDVKPDESTM 213
Query: 231 ISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFAS 290
+VLS C +++ GRQ+H+ + F ++ + + LI +Y KCGE+ + +F+
Sbjct: 214 ATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKCGEMERAHGLFEGLQY 273
Query: 291 KDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGR-- 348
KD++ WN++I GYA +++L VF EM G P+DVT++ +L AC++ G + GR
Sbjct: 274 KDVISWNTLIGGYAYINHHKEALLVFQEMLKLGETPNDVTMLSILPACAHLGAIDIGRWI 333
Query: 349 EIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIE-----------AMPF----- 392
++ K K ++ T ++D+ + G +E A ++ + AM F
Sbjct: 334 HVYIDKKLKGII-TNTSLQTSLIDMYAKCGNIEAANQVFDTILNKSLSSCNAMIFGFAMH 392
Query: 393 ------------------EPDAIIWGSLLGACRTHMKLDLAEVAAKKL---LQLEPKNAG 431
EPD I + LL AC DL K + ++EPK
Sbjct: 393 GRADAAFDLLSRMKKDGIEPDDITFVGLLSACSHAGLSDLGRKIFKSMTLDYRIEPK-LE 451
Query: 432 PYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEK--KVH 477
Y + ++ G F + EL +M ++P G W + K K+H
Sbjct: 452 HYGCMIDLLGRSGLFKEAEELINSM----TMEPDGVIWGSLLKACKIH 495
>gi|297844988|ref|XP_002890375.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336217|gb|EFH66634.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 760
Score = 443 bits (1140), Expect = e-121, Method: Compositional matrix adjust.
Identities = 229/601 (38%), Positives = 354/601 (58%), Gaps = 48/601 (7%)
Query: 47 FIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKK----NVISW 102
++R R+ DAR++FD M EKDVV + ++ GY + G ++E I EM K N++SW
Sbjct: 161 YMRCGRMGDARKVFDRMSEKDVVTCSALLCGYARKGCLEEVVRILSEMEKSGIEPNIVSW 220
Query: 103 TTMISGYVNNNRIDVARKLFE----------------VMPE------------------- 127
++SG+ + A +F+ V+P
Sbjct: 221 NGILSGFNRSGYHKEAVIMFQKMHHLGFCPDQVTVSSVLPSVGDSENLNMGRQIHGYVIK 280
Query: 128 ----KNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVV 183
K++ +AML Y + G + +LF M N+ I GL +NG V KA +
Sbjct: 281 QGLLKDKCVISAMLDMYGKSGHVYGIIKLFDEFEMMETGVCNAYITGLSRNGLVDKALEM 340
Query: 184 F----DQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCAS 239
F +Q E + +W+ +I + G ++E ++LF MQ GV+ N ++ S+L C +
Sbjct: 341 FGLFKEQKMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNRVTIPSMLPACGN 400
Query: 240 LASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSI 299
+A+L HGR H VR DV+V S LI MY KCG + +++F+ +K++V WNS+
Sbjct: 401 IAALGHGRSTHGFAVRVHLLDDVHVGSALIDMYAKCGRIKMSQIVFNMMPTKNLVCWNSL 460
Query: 300 ISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYL 359
++GY+ +G ++ + +F + + + PD ++ +LSAC G EG + F M +Y
Sbjct: 461 MNGYSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFNMMSEEYG 520
Query: 360 VEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAA 419
++P+ EHY+CMV+LLGRAG++++A LI+ +PFEPD+ +WG+LL +CR +DLAE+AA
Sbjct: 521 IKPRLEHYSCMVNLLGRAGKLQEAYDLIKEIPFEPDSCVWGALLNSCRLQNNVDLAEIAA 580
Query: 420 KKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMF 479
+KL LEP+N G Y+L+SNIYA++G + +V +R M + K PGCSWI+V+ KV+
Sbjct: 581 QKLFHLEPENPGTYVLMSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNKVYTL 640
Query: 480 TGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVA 539
D SHP+ I +++I +R++G+ P+ F L DV+E+E+ L HSEKLAV
Sbjct: 641 LACD-KSHPQIDQITEKMDEISEEMRKSGHRPNLDFALQDVEEQEQEQMLWGHSEKLAVV 699
Query: 540 YGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDY 599
+GL+ P+G P++V+KNLR+CGDCH+ IK IS GREI +RD NRFHHFKDG+CSC D+
Sbjct: 700 FGLLNTPDGTPLQVIKNLRICGDCHAVIKFISSYAGREIFIRDTNRFHHFKDGICSCGDF 759
Query: 600 W 600
W
Sbjct: 760 W 760
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 92/175 (52%)
Query: 180 ARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCAS 239
A ++ + + ++S +I + + I +F+ M G+ + L ++ VCA
Sbjct: 69 ADLILQSIPDPTVYSFSSLIYALTKAKLFSQSIGVFSRMFSHGLIPDTHVLPNLFKVCAE 128
Query: 240 LASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSI 299
L++ G+Q+H D+D +V L MY++CG + + +FD + KD+V +++
Sbjct: 129 LSAFKAGKQIHCVACVSGLDMDAFVQGSLFHMYMRCGRMGDARKVFDRMSEKDVVTCSAL 188
Query: 300 ISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESM 354
+ GYA+ G E+ +++ EM SG+ P+ V+ G+LS + +G KE +F+ M
Sbjct: 189 LCGYARKGCLEEVVRILSEMEKSGIEPNIVSWNGILSGFNRSGYHKEAVIMFQKM 243
>gi|224065851|ref|XP_002301973.1| predicted protein [Populus trichocarpa]
gi|222843699|gb|EEE81246.1| predicted protein [Populus trichocarpa]
Length = 716
Score = 443 bits (1139), Expect = e-121, Method: Compositional matrix adjust.
Identities = 236/608 (38%), Positives = 352/608 (57%), Gaps = 46/608 (7%)
Query: 38 VSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIF----DE 93
V + +L +++ + DAR +FD +P+ VV + ++ + + GRV E +E+F D
Sbjct: 110 VVLSSLLHMYVQFDHLKDARNVFDKLPQPGVVTSSALISRFARKGRVKETKELFYQTRDL 169
Query: 94 MPKKNVISWTTMISGYVNNNRIDVARKLFEVM------PEKNEVSW-------------- 133
+ N++SW MISG+ + A +F+ M P+ VS
Sbjct: 170 GVELNLVSWNGMISGFNRSGSYLDAVLMFQNMHLEGLKPDGTSVSSVLPAVGDLDMPLMG 229
Query: 134 -------------------TAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQN 174
+A++ Y +C + +F M V A N+++ GL +N
Sbjct: 230 IQIHCYVIKQGLGPDKFVVSALIDMYGKCACASEMSGVFNEMDEVDVGACNALVTGLSRN 289
Query: 175 GEVQKARVVFDQMREKD--DATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLIS 232
G V A VF Q + D +W+ MI + G ++E ++LF MQ EGV+ N ++
Sbjct: 290 GLVDNALEVFKQFKGMDLNVVSWTSMIASCSQNGKDMEALELFREMQIEGVKPNSVTIPC 349
Query: 233 VLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKD 292
+L C ++A+L HG+ H +R DVYV S LI MY KCG ++ +L FD +++
Sbjct: 350 LLPACGNIAALLHGKAAHCFSLRNGIFNDVYVGSALIDMYAKCGRMLASRLCFDMMPNRN 409
Query: 293 IVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFE 352
+V WNS+++GYA +G +++ +F M G PD V+ VLSAC+ G +EG F+
Sbjct: 410 LVSWNSLMAGYAMHGKTFEAINIFELMQRCGQKPDHVSFTCVLSACTQGGLTEEGWFYFD 469
Query: 353 SMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKL 412
SM + VE + EHY+CMV LLGR+G++E+A +I+ MPFEPD+ +WG+LL +CR H ++
Sbjct: 470 SMSRNHGVEARMEHYSCMVTLLGRSGRLEEAYAMIKQMPFEPDSCVWGALLSSCRVHNRV 529
Query: 413 DLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEV 472
DL E+AAK++ +LEP+N G YILLSNIYAS+ + +V +R MR R + K PG SWIE+
Sbjct: 530 DLGEIAAKRVFELEPRNPGNYILLSNIYASKAMWVEVDMVRDMMRSRGLKKNPGYSWIEI 589
Query: 473 EKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYH 532
+ KVHM D SHP+ P I+ L K+ ++++GY P + FVL DV+E++K L H
Sbjct: 590 KNKVHMLLAGDS-SHPQMPQIIEKLAKLTVEMKKSGYVPHTDFVLQDVEEQDKEQILCGH 648
Query: 533 SEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDG 592
SEKLAV GL+ G P++V+KNLR+C DCH+ IK IS REI +RD NRFH FK G
Sbjct: 649 SEKLAVVLGLLNTKPGFPLQVIKNLRICRDCHAVIKFISDFEKREIFVRDTNRFHQFKGG 708
Query: 593 LCSCRDYW 600
+CSC DYW
Sbjct: 709 VCSCGDYW 716
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 129/252 (51%), Gaps = 7/252 (2%)
Query: 129 NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMR 188
+ V +++L Y Q ++DA +F +P VV S+++I + G V++ + +F Q R
Sbjct: 108 DSVVLSSLLHMYVQFDHLKDARNVFDKLPQPGVVTSSALISRFARKGRVKETKELFYQTR 167
Query: 189 ----EKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLD 244
E + +W+GMI + R G L+ + +F M EG++ + S+ SVL L
Sbjct: 168 DLGVELNLVSWNGMISGFNRSGSYLDAVLMFQNMHLEGLKPDGTSVSSVLPAVGDLDMPL 227
Query: 245 HGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYA 304
G Q+H +++ D +V S LI MY KC + +F+ D+ N++++G +
Sbjct: 228 MGIQIHCYVIKQGLGPDKFVVSALIDMYGKCACASEMSGVFNEMDEVDVGACNALVTGLS 287
Query: 305 QYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKT 364
+ GL + +L+VF + G+ + V+ ++++CS GK E E+F M+ + V+P +
Sbjct: 288 RNGLVDNALEVFKQF--KGMDLNVVSWTSMIASCSQNGKDMEALELFREMQIEG-VKPNS 344
Query: 365 EHYACMVDLLGR 376
C++ G
Sbjct: 345 VTIPCLLPACGN 356
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 85/156 (54%)
Query: 199 IKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQF 258
I+++ + + VI +F+ M +G+ + L +V+ CA+L++L G+Q+H +
Sbjct: 46 IQIFSKLNHFGHVIRVFSYMLTQGIVPDSRVLPTVIKTCAALSALQTGKQMHCFALVSGL 105
Query: 259 DVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHE 318
+D V S L+ MY++ L + +FD +V +++IS +A+ G +++ ++F++
Sbjct: 106 GLDSVVLSSLLHMYVQFDHLKDARNVFDKLPQPGVVTSSALISRFARKGRVKETKELFYQ 165
Query: 319 MFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESM 354
GV + V+ G++S + +G + +F++M
Sbjct: 166 TRDLGVELNLVSWNGMISGFNRSGSYLDAVLMFQNM 201
>gi|357123666|ref|XP_003563529.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Brachypodium distachyon]
Length = 742
Score = 443 bits (1139), Expect = e-121, Method: Compositional matrix adjust.
Identities = 229/598 (38%), Positives = 360/598 (60%), Gaps = 10/598 (1%)
Query: 12 MVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQ 71
++ YVE G+ +A F +P K+ V+WT ++ G + +DDA L P ++V++
Sbjct: 146 IIHMYVELGLAGDARRAFDDIPVKDAVAWTTVISGLAKLGLLDDAWCLLRHSPARNVISW 205
Query: 72 TNMVLGYCQDGRVDEGREIFDEMPKKNV----ISWTTMISGYVNNNRIDVARKLFEVMPE 127
T ++ GY + GR E + F+ M + ++ ++S + R L +++ E
Sbjct: 206 TGLISGYSRAGRAAEAVDCFNSMLSDGIEPDEVTVIGLLSACAQLKDLVFGRSLHKLVGE 265
Query: 128 KNEVSW----TAMLMGYTQCGRIQDAWELFKAMPMKSVVAS-NSMILGLGQNGEVQKARV 182
K + A++ Y +CG I AWE+F A+ S N+MI G + G V AR
Sbjct: 266 KGMLMSGKLVVALIDMYAKCGDIGRAWEVFDALGRGRRPQSWNAMIDGYCKLGHVDVARY 325
Query: 183 VFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLAS 242
+FDQM ++D T++ +I Y G E + LF M++ +R + +++S+L+ CASL +
Sbjct: 326 LFDQMEDRDLVTFNSLITGYIHGGRLREALLLFMQMRRHDLRADNFTMVSLLTACASLGA 385
Query: 243 LDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISG 302
L GR +HA + + +VD+Y+ + L+ MY+KCG + + L+F + +D+ W+++I+G
Sbjct: 386 LPQGRALHACIEQRLVEVDIYLGTALLDMYLKCGRVEEASLVFQAMSVRDVHTWSAMIAG 445
Query: 303 YAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEP 362
A G+G+ +L+ F M G P+ VT + +L+ACS++ + EGR FE M+ + + P
Sbjct: 446 LAFNGMGKAALEYFFWMKVDGFQPNSVTYIAILTACSHSCLLDEGRLYFEEMRLLHNIRP 505
Query: 363 KTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKL 422
EHY CM+DLLGR+G +++AM L+ MP +P+A+IW S+L ACR H +LA AA+ L
Sbjct: 506 LIEHYGCMIDLLGRSGLLDEAMDLVRTMPMQPNAVIWASILSACRVHKDANLARNAAEHL 565
Query: 423 LQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGR 482
L+LEP Y+ L NIY ++ D +++R+ M +R V K G S I V +VH F
Sbjct: 566 LKLEPDEDAVYVQLYNIYIDSRQWEDASQIRRLMEERGVKKAAGYSSITVAGQVHKFIVC 625
Query: 483 DCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGL 542
D +HP+ I M+E+I L+ GY P +S + DVDEEEK H+L HSEK+A+A+GL
Sbjct: 626 D-RTHPQIMEITAMMEEITRRLKSVGYSPITSQITVDVDEEEKEHALLAHSEKIAIAFGL 684
Query: 543 VKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
+ L +P+ ++KNLRVC DCHSAIKLIS++ REII+RD +RFHHF+DG CSC D+W
Sbjct: 685 ISLAPNLPLHIIKNLRVCEDCHSAIKLISRIWNREIIVRDRSRFHHFRDGTCSCNDFW 742
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/326 (23%), Positives = 138/326 (42%), Gaps = 79/326 (24%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDA---- 56
+P ++ V+WT ++ G + G++ +A L P +NV+SWT ++ G+ R R +A
Sbjct: 166 IPVKDAVAWTTVISGLAKLGLLDDAWCLLRHSPARNVISWTGLISGYSRAGRAAEAVDCF 225
Query: 57 -------------------------------RRLFDMMPEKDVVAQTNMVLG----YCQD 81
R L ++ EK ++ +V+ Y +
Sbjct: 226 NSMLSDGIEPDEVTVIGLLSACAQLKDLVFGRSLHKLVGEKGMLMSGKLVVALIDMYAKC 285
Query: 82 GRVDEGREIFDEMPK-KNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGY 140
G + E+FD + + + SW MI GY +DVAR LF+ M +++ V++ +++ GY
Sbjct: 286 GDIGRAWEVFDALGRGRRPQSWNAMIDGYCKLGHVDVARYLFDQMEDRDLVTFNSLITGY 345
Query: 141 TQCGRIQDAWELFKAM----------PMKSVVASNSMILGLGQN---------------- 174
GR+++A LF M M S++ + + + L Q
Sbjct: 346 IHGGRLREALLLFMQMRRHDLRADNFTMVSLLTACASLGALPQGRALHACIEQRLVEVDI 405
Query: 175 -------------GEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKE 221
G V++A +VF M +D TWS MI G ++ F M+ +
Sbjct: 406 YLGTALLDMYLKCGRVEEASLVFQAMSVRDVHTWSAMIAGLAFNGMGKAALEYFFWMKVD 465
Query: 222 GVRVNFPSLISVLSVCASLASLDHGR 247
G + N + I++L+ C+ LD GR
Sbjct: 466 GFQPNSVTYIAILTACSHSCLLDEGR 491
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 131/288 (45%), Gaps = 23/288 (7%)
Query: 4 RNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMM 63
R SW AM+ GY + G + A LF QM ++++V++ ++ G+I R+ +A LF M
Sbjct: 302 RRPQSWNAMIDGYCKLGHVDVARYLFDQMEDRDLVTFNSLITGYIHGGRLREALLLFMQM 361
Query: 64 PEKDVVAQT----NMVLGYCQDGRVDEGREIFDEMPKK----NVISWTTMISGYVNNNRI 115
D+ A +++ G + +GR + + ++ ++ T ++ Y+ R+
Sbjct: 362 RRHDLRADNFTMVSLLTACASLGALPQGRALHACIEQRLVEVDIYLGTALLDMYLKCGRV 421
Query: 116 DVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPM----KSVVASNSMILGL 171
+ A +F+ M ++ +W+AM+ G G + A E F M + + V +++
Sbjct: 422 EEASLVFQAMSVRDVHTWSAMIAGLAFNGMGKAALEYFFWMKVDGFQPNSVTYIAILTAC 481
Query: 172 GQNGEVQKARVVFDQMREKDDAT-----WSGMIKVYERKGYELEVIDLFTLMQKEGVRVN 226
+ + + R+ F++MR + + MI + R G E +DL M + V
Sbjct: 482 SHSCLLDEGRLYFEEMRLLHNIRPLIEHYGCMIDLLGRSGLLDEAMDLVRTMPMQPNAVI 541
Query: 227 FPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVD-VYVASVLITMYI 273
+ S+LS C + R L++ + D D VYV L +YI
Sbjct: 542 WA---SILSACRVHKDANLARNAAEHLLKLEPDEDAVYVQ--LYNIYI 584
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 121/282 (42%), Gaps = 39/282 (13%)
Query: 214 LFTLMQKEGVRVNFPSLISVLSVCA-SLASLDHGRQVHAQLVRCQFDVDV-YVASVLITM 271
L+ M++ GV + + + CA A + + +HA R V V++ +I M
Sbjct: 90 LYRRMRRTGVCTDAFTFHFLFKCCARGRAHVLLCQMLHAACFRTMLPSAVPLVSNPIIHM 149
Query: 272 YIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGL----------------------- 308
Y++ G + FD+ KD V W ++ISG A+ GL
Sbjct: 150 YVELGLAGDARRAFDDIPVKDAVAWTTVISGLAKLGLLDDAWCLLRHSPARNVISWTGLI 209
Query: 309 --------GEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLV 360
+++ F+ M S G+ PD+VT++G+LSAC+ + GR + + + K ++
Sbjct: 210 SGYSRAGRAAEAVDCFNSMLSDGIEPDEVTVIGLLSACAQLKDLVFGRSLHKLVGEKGML 269
Query: 361 EPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL-GACRTHMKLDLAEVAA 419
+ ++D+ + G + A ++ +A+ W +++ G C KL +VA
Sbjct: 270 M-SGKLVVALIDMYAKCGDIGRAWEVFDALGRGRRPQSWNAMIDGYC----KLGHVDVAR 324
Query: 420 KKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNV 461
Q+E ++ + L Y GR + L MR+ ++
Sbjct: 325 YLFDQMEDRDLVTFNSLITGYIHGGRLREALLLFMQMRRHDL 366
Score = 42.4 bits (98), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 63/145 (43%), Gaps = 10/145 (6%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDM 62
E ++ TA++ Y++ G + EA +F M ++V +W+ M+ G + A F
Sbjct: 402 EVDIYLGTALLDMYLKCGRVEEASLVFQAMSVRDVHTWSAMIAGLAFNGMGKAALEYFFW 461
Query: 63 MP----EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVI-----SWTTMISGYVNNN 113
M + + V ++ +DEGR F+EM + I + MI +
Sbjct: 462 MKVDGFQPNSVTYIAILTACSHSCLLDEGRLYFEEMRLLHNIRPLIEHYGCMIDLLGRSG 521
Query: 114 RIDVARKLFEVMP-EKNEVSWTAML 137
+D A L MP + N V W ++L
Sbjct: 522 LLDEAMDLVRTMPMQPNAVIWASIL 546
>gi|225465296|ref|XP_002268999.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Vitis vinifera]
Length = 729
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 242/602 (40%), Positives = 363/602 (60%), Gaps = 17/602 (2%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMP--EKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKD 67
A++ Y G I A +F ++P E+ V W M+ G+ + A+ LFD+MPE++
Sbjct: 134 NAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMVSGYWKWESEGQAQWLFDVMPERN 193
Query: 68 VVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMP- 126
V+ T MV GY + ++ R FD MP+++V+SW M+SGY N + A +LF+ M
Sbjct: 194 VITWTAMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEALRLFDEMVN 253
Query: 127 ---EKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSV----VASNSMILGLGQNGEVQK 179
E +E +W ++ + G A L + + K + +++ + G++
Sbjct: 254 AGIEPDETTWVTVISACSSRGDPCLAASLVRTLHQKRIQLNCFVRTALLDMYAKFGDLDS 313
Query: 180 ARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFT-LMQKEGVRVNFPSLISVLSVCA 238
AR +F+ M ++ TW+ MI Y + G I+LF ++ + + + +++SV+S C
Sbjct: 314 ARKLFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACG 373
Query: 239 SLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNS 298
L +L+ G V L Q + + + +I MY +CG + K +F A++D+V +N+
Sbjct: 374 HLGALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVSYNT 433
Query: 299 IISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKY 358
+ISG+A +G G +++ + M G+ PD VT +GVL+ACS+ G ++EGR++FES+K
Sbjct: 434 LISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEGRKVFESIK--- 490
Query: 359 LVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVA 418
+P +HYACMVDLLGR G++EDA + +E MP EP A ++GSLL A R H +++L E+A
Sbjct: 491 --DPAIDHYACMVDLLGRVGELEDAKRTMERMPMEPHAGVYGSLLNASRIHKQVELGELA 548
Query: 419 AKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHM 478
A KL +LEP N+G +ILLSNIYAS GR+ DV +R+ M+K V K G SW+E K+H
Sbjct: 549 ANKLFELEPDNSGNFILLSNIYASAGRWKDVERIREAMKKGGVKKTTGWSWVEYGGKLHK 608
Query: 479 FTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAV 538
F D SH I ++L ++ +REAGY D S VL DV+EEEK + HSEKLA+
Sbjct: 609 FIVAD-RSHERSDDIYQLLIELRKKMREAGYIADKSCVLRDVEEEEKEEIVGTHSEKLAI 667
Query: 539 AYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRD 598
Y L+ G IRV+KNLRVC DCH+AIK+ISK+ GR II+RD NRFH F DGLCSC+D
Sbjct: 668 CYALLVSEAGAVIRVVKNLRVCWDCHTAIKMISKLEGRVIIVRDNNRFHCFNDGLCSCKD 727
Query: 599 YW 600
YW
Sbjct: 728 YW 729
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 101/350 (28%), Positives = 176/350 (50%), Gaps = 44/350 (12%)
Query: 67 DVVAQTNMVLGYCQDGRVDEGREIFDEMP--KKNVISWTTMISGYVNNNRIDVARKLFEV 124
D + ++ Y + G + R++FDE+P ++ V W M+SGY A+ LF+V
Sbjct: 129 DAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMVSGYWKWESEGQAQWLFDV 188
Query: 125 MPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVF 184
MPE+N ++WTAM+ GY + ++ A F MP +SVV+ N+M+ G QNG ++A +F
Sbjct: 189 MPERNVITWTAMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEALRLF 248
Query: 185 DQMR----EKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASL 240
D+M E D+ TW +I +G P L ASL
Sbjct: 249 DEMVNAGIEPDETTWVTVISACSSRGD--------------------PCL------AASL 282
Query: 241 ASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSII 300
H +++ ++ +V + L+ MY K G+L + +F+ +++V WNS+I
Sbjct: 283 VRTLHQKRIQ---------LNCFVRTALLDMYAKFGDLDSARKLFNTMPGRNVVTWNSMI 333
Query: 301 SGYAQYGLGEKSLKVFHEMFSS-GVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYL 359
+GYAQ G ++++F EM ++ + PD+VT+V V+SAC + G ++ G + + +
Sbjct: 334 AGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACGHLGALELGNWVVRFLTENQI 393
Query: 360 VEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTH 409
+ H A M+ + R G +EDA ++ + M D + + +L+ H
Sbjct: 394 KLSISGHNA-MIFMYSRCGSMEDAKRVFQEMATR-DVVSYNTLISGFAAH 441
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 95/326 (29%), Positives = 148/326 (45%), Gaps = 79/326 (24%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDM 62
ER V W AMV GY + +A LF MPE+NV++WT M+ G+ + ++ ARR FD
Sbjct: 160 ERKVADWNAMVSGYWKWESEGQAQWLFDVMPERNVITWTAMVTGYAKVKDLEAARRYFDC 219
Query: 63 MPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNV----ISWTTMISG---------- 108
MPE+ VV+ M+ GY Q+G +E +FDEM + +W T+IS
Sbjct: 220 MPERSVVSWNAMLSGYAQNGLAEEALRLFDEMVNAGIEPDETTWVTVISACSSRGDPCLA 279
Query: 109 -------------------------YVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQC 143
Y +D ARKLF MP +N V+W +M+ GY Q
Sbjct: 280 ASLVRTLHQKRIQLNCFVRTALLDMYAKFGDLDSARKLFNTMPGRNVVTWNSMIAGYAQN 339
Query: 144 GRIQDAWELFKAM-----------PMKSVVAS---------------------------- 164
G+ A ELFK M M SV+++
Sbjct: 340 GQSAMAIELFKEMITAKKLTPDEVTMVSVISACGHLGALELGNWVVRFLTENQIKLSISG 399
Query: 165 -NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGV 223
N+MI + G ++ A+ VF +M +D +++ +I + G+ +E I+L + M++ G+
Sbjct: 400 HNAMIFMYSRCGSMEDAKRVFQEMATRDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGI 459
Query: 224 RVNFPSLISVLSVCASLASLDHGRQV 249
+ + I VL+ C+ L+ GR+V
Sbjct: 460 EPDRVTFIGVLTACSHAGLLEEGRKV 485
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/292 (21%), Positives = 127/292 (43%), Gaps = 30/292 (10%)
Query: 182 VVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVN---FPSLISVLSVCA 238
++F+ + ++ M++ Y +V+ ++ MQ GVR + +P LI
Sbjct: 55 LLFNSTLNPNVFVFTSMLRFYSHLQDHAKVVLMYEQMQGCGVRPDAFVYPILIK------ 108
Query: 239 SLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFAS--KDIVMW 296
++ G HA +++ D +V + +I MY + G + + +FD + + W
Sbjct: 109 --SAGTGGIGFHAHVLKLGHGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADW 166
Query: 297 NSIISGYAQYGLGEKSLKVFHEMFSSGVMPDD--VTLVGVLSACSYTGKVKEGREIFESM 354
N+++SGY ++ ++ +F VMP+ +T +++ + ++ R F+ M
Sbjct: 167 NAMVSGYWKWESEGQAQWLF------DVMPERNVITWTAMVTGYAKVKDLEAARRYFDCM 220
Query: 355 KSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAM---PFEPDAIIWGSLLGACRTHMK 411
+ +V + M+ + G E+A++L + M EPD W +++ AC +
Sbjct: 221 PERSVVS-----WNAMLSGYAQNGLAEEALRLFDEMVNAGIEPDETTWVTVISACSSRGD 275
Query: 412 LDLAEVAAKKLLQLEPK-NAGPYILLSNIYASQGRFHDVAELRKNMRKRNVI 462
LA + L Q + N L ++YA G +L M RNV+
Sbjct: 276 PCLAASLVRTLHQKRIQLNCFVRTALLDMYAKFGDLDSARKLFNTMPGRNVV 327
>gi|357508385|ref|XP_003624481.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240699|gb|ABD32557.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355499496|gb|AES80699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 672
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 247/653 (37%), Positives = 362/653 (55%), Gaps = 87/653 (13%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQM------PEKNVVSWTVMLGGFIRDSRIDDARR 58
+V SW +++ + G +A F M P ++ T I
Sbjct: 50 SVYSWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCT-----------IKSCSS 98
Query: 59 LFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVA 118
L+D+ K + Q V GY G +IF + +I Y ++ A
Sbjct: 99 LYDLCAGKQI-HQQAFVFGY--------GSDIFVA---------SALIDMYSKCGYLNDA 140
Query: 119 RKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPM-------------------- 158
RKLF+ +PE+N VSWT+M+ GY Q R ++A LFK +
Sbjct: 141 RKLFDEIPERNVVSWTSMISGYVQNERAREAVFLFKEFLLVDETDYDEIVGVGVGVDSVL 200
Query: 159 -------------KSVV-----------------ASNSMILGLGQNGEVQKARVVFDQMR 188
KSV N+++ + GE+ +R VFD M
Sbjct: 201 LGCVISACARVCVKSVTECVHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGME 260
Query: 189 EKDDATWSGMIKVYERKGYELEVIDLFTLMQKEG-VRVNFPSLISVLSVCASLASLDHGR 247
E D +W+ +I VY + G +E LF+ M K G VR N +L +VL CA +L G+
Sbjct: 261 ETDVCSWNSLIAVYAQNGLSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGK 320
Query: 248 QVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYG 307
+H Q+V+ + + ++ V + ++ MY KCG + + FD K++ W +++GY +G
Sbjct: 321 CIHDQVVKMELEDNLVVGTSIVDMYCKCGRVEMARKAFDRLKRKNVKSWTVMVAGYGMHG 380
Query: 308 LGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHY 367
G++++KVF+EM G+ P+ +T V VL+ACS+ G +KEG F MK ++ VEP EHY
Sbjct: 381 HGKEAMKVFYEMIRCGIKPNYITFVSVLAACSHAGLLKEGWHWFNKMKCEFDVEPGIEHY 440
Query: 368 ACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEP 427
+CMVDLLGRAG +++A LI+ M +PD I+WGSLLGACR H ++L E++A+KL +L+P
Sbjct: 441 SCMVDLLGRAGYLKEAYGLIQEMKVKPDFIVWGSLLGACRIHKNVELGEISARKLFKLDP 500
Query: 428 KNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSH 487
N G Y+LLSNIYA GR+ DV +R M+ ++K PG S +E + +VH+F D H
Sbjct: 501 SNCGYYVLLSNIYADAGRWDDVERMRILMKNHGLLKTPGYSIVEHKGRVHVFLVGD-KEH 559
Query: 488 PEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPE 547
P+H I L+++ L+E GY P+ + VL+DVD EEK LR HSEKLAVA+G++
Sbjct: 560 PQHEKIYEYLDELNVKLQEVGYMPNVTSVLYDVDVEEKGMVLRVHSEKLAVAFGIMNSVP 619
Query: 548 GVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
G I+++KNLR+CGDCH AIKLISK++ REI++RD+ RFHHFKDGLCSC DYW
Sbjct: 620 GSVIQIIKNLRICGDCHFAIKLISKIVNREIVIRDSKRFHHFKDGLCSCGDYW 672
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 108/218 (49%), Gaps = 19/218 (8%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEK-----NVVSWTVMLGGFIRDSRIDD 55
M E +V SW +++ Y + G+ EA +LF M ++ N V+ + +L +
Sbjct: 259 MEETDVCSWNSLIAVYAQNGLSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQI 318
Query: 56 ARRLFD----MMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVN 111
+ + D M E ++V T++V YC+ GRV+ R+ FD + +KNV SWT M++GY
Sbjct: 319 GKCIHDQVVKMELEDNLVVGTSIVDMYCKCGRVEMARKAFDRLKRKNVKSWTVMVAGYGM 378
Query: 112 NNRIDVARKLFEVM----PEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMK-----SVV 162
+ A K+F M + N +++ ++L + G +++ W F M + +
Sbjct: 379 HGHGKEAMKVFYEMIRCGIKPNYITFVSVLAACSHAGLLKEGWHWFNKMKCEFDVEPGIE 438
Query: 163 ASNSMILGLGQNGEVQKARVVFDQMREKDD-ATWSGMI 199
+ M+ LG+ G +++A + +M+ K D W ++
Sbjct: 439 HYSCMVDLLGRAGYLKEAYGLIQEMKVKPDFIVWGSLL 476
>gi|242094598|ref|XP_002437789.1| hypothetical protein SORBIDRAFT_10g002620 [Sorghum bicolor]
gi|241916012|gb|EER89156.1| hypothetical protein SORBIDRAFT_10g002620 [Sorghum bicolor]
Length = 623
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 216/521 (41%), Positives = 325/521 (62%), Gaps = 5/521 (0%)
Query: 4 RNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMM 63
RNVV+WTA++ GY ++ EA LF +MP++NVVSW ML + R+ DA LFD M
Sbjct: 103 RNVVTWTALLSGYARARLVDEAEALFQRMPQRNVVSWNTMLEAYAAAGRVGDACALFDRM 162
Query: 64 PEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFE 123
P +D + ++ + G VD+ RE+F MP+++V++WTTM+ G + ++D AR LF+
Sbjct: 163 PVRDAGSWNILLATLVRSGSVDKARELFGRMPERDVMAWTTMVDGVARSGKVDEARVLFD 222
Query: 124 VMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVV 183
MPE+N VSW AM+ GYT+ RI +A +LF MP + + + N M+ G QN ++++AR +
Sbjct: 223 SMPERNVVSWNAMISGYTRNHRIDEALDLFMKMPERDIASCNIMVTGFIQNKDLKRAREL 282
Query: 184 FDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASL 243
FD+M E++ TW+ M+ Y + + LF+ M G R N + + L C+ LA+L
Sbjct: 283 FDEMPERNVVTWTTMMNGYLKGKQSELALGLFSGMLMAGTRPNQVTFLGALDACSDLAAL 342
Query: 244 DHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGY 303
G+QVH + + F D +V S L+ +Y KCGE+ + +FD KD++ WN II+ Y
Sbjct: 343 CEGKQVHQMICKTTFQFDAFVESALMNVYAKCGEIGLARKLFDLSREKDLISWNGIIAAY 402
Query: 304 AQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPK 363
A +G+G +++ ++ +M +G P+DVT V +LSACS++G V EG +IFESM + + +
Sbjct: 403 AHHGVGIEAILLYEKMQENGYRPNDVTYVVLLSACSHSGLVDEGLKIFESMVNDRSIAVR 462
Query: 364 TEHYACMVDLLGRAGQVEDAMKLIEAMPFEP-DAIIWGSLLGACRTHMKLDLAEVAAKKL 422
EHY C++DL RAG+++DA +LI + +P +W +LLG C H + +AA+ L
Sbjct: 463 DEHYTCLIDLCSRAGRLDDAKRLIHYLKIKPASGSVWSALLGGCNAHGNESIGNLAARNL 522
Query: 423 LQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGR 482
LQ EP NAG Y LLSNIYAS G++ + AE+R M R + K PGCSWIEV KVH+F R
Sbjct: 523 LQAEPDNAGTYTLLSNIYASAGKWKEAAEIRSEMNNRGLKKQPGCSWIEVANKVHVFVAR 582
Query: 483 DCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEE 523
D SH E +I +L+ I ++R G P S ++H VDE+
Sbjct: 583 D-KSHSESDLIYGLLQNIHHMMRIVGTVP--SDLVH-VDED 619
Score = 186 bits (471), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 109/360 (30%), Positives = 194/360 (53%), Gaps = 13/360 (3%)
Query: 52 RIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEM-PKKNVISWTTMISGYV 110
R+ DAR+LFD P+ DVV+ T +V Y + G + + RE+FD ++NV++WT ++SGY
Sbjct: 57 RVWDARKLFDGTPDWDVVSWTALVSAYARRGMLRDARELFDRPDARRNVVTWTALLSGYA 116
Query: 111 NNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILG 170
+D A LF+ MP++N VSW ML Y GR+ DA LF MP++ + N ++
Sbjct: 117 RARLVDEAEALFQRMPQRNVVSWNTMLEAYAAAGRVGDACALFDRMPVRDAGSWNILLAT 176
Query: 171 LGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSL 230
L ++G V KAR +F +M E+D W+ M+ R G E LF M + V V++ ++
Sbjct: 177 LVRSGSVDKARELFGRMPERDVMAWTTMVDGVARSGKVDEARVLFDSMPERNV-VSWNAM 235
Query: 231 ISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFAS 290
IS + +H L + D+ ++++T +I+ +L + + +FD
Sbjct: 236 ISGY-------TRNHRIDEALDLFMKMPERDIASCNIMVTGFIQNKDLKRARELFDEMPE 288
Query: 291 KDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREI 350
+++V W ++++GY + E +L +F M +G P+ VT +G L ACS + EG+++
Sbjct: 289 RNVVTWTTMMNGYLKGKQSELALGLFSGMLMAGTRPNQVTFLGALDACSDLAALCEGKQV 348
Query: 351 FESM-KSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTH 409
+ + K+ + + E + ++++ + G++ A KL + + E D I W ++ A H
Sbjct: 349 HQMICKTTFQFDAFVE--SALMNVYAKCGEIGLARKLFD-LSREKDLISWNGIIAAYAHH 405
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 101/227 (44%), Gaps = 16/227 (7%)
Query: 165 NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVR 224
N +I L G V AR +FD + D +W+ ++ Y R+G + +LF + R
Sbjct: 46 NRLIAELAAAGRVWDARKLFDGTPDWDVVSWTALVSAYARRGMLRDARELF---DRPDAR 102
Query: 225 VNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLI 284
N + ++LS A +D + ++ + +V + ++ Y G + +
Sbjct: 103 RNVVTWTALLSGYARARLVDEAEALFQRMPQ----RNVVSWNTMLEAYAAAGRVGDACAL 158
Query: 285 FDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKV 344
FD +D WN +++ + G +K+ ++F M VM + GV + +GKV
Sbjct: 159 FDRMPVRDAGSWNILLATLVRSGSVDKARELFGRMPERDVMAWTTMVDGV----ARSGKV 214
Query: 345 KEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMP 391
E R +F+SM + +V + M+ R ++++A+ L MP
Sbjct: 215 DEARVLFDSMPERNVVS-----WNAMISGYTRNHRIDEALDLFMKMP 256
>gi|414887370|tpg|DAA63384.1| TPA: hypothetical protein ZEAMMB73_689576 [Zea mays]
Length = 802
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 226/589 (38%), Positives = 337/589 (57%), Gaps = 44/589 (7%)
Query: 55 DARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNR 114
DAR++ D MP KD + T MV+GY + G V R +F+E+ K + W MISGYV++
Sbjct: 215 DARKVLDEMPNKDDLTWTTMVVGYVRRGDVGAARSVFEEVDGKFDVVWNAMISGYVHSGM 274
Query: 115 IDVARKLFEVM-------------------------------------------PEKNEV 131
A +LF M PE
Sbjct: 275 AVEAFELFRRMVLERVPLDEFTFTSVLSACANVGLFAHGKSVHGQIIRLQPNFVPEAALP 334
Query: 132 SWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKD 191
A++ Y++CG I A +F M +K VV+ N+++ G ++ + KA VF++M K+
Sbjct: 335 VNNALVTFYSKCGNIAVARRIFDNMTLKDVVSWNTILSGYVESSCLDKAVEVFEEMPYKN 394
Query: 192 DATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHA 251
+ +W M+ Y G+ + + LF M+ E V+ + ++ C L +L HG+Q+H
Sbjct: 395 ELSWMVMVSGYVHGGFAEDALKLFNKMRSENVKPCDYTYAGAIAACGELGALKHGKQLHG 454
Query: 252 QLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEK 311
+V+ F+ + LITMY +CG + + L+F + D V WN++IS Q+G G +
Sbjct: 455 HIVQLGFEGSNSAGNALITMYARCGAVKEAHLMFLVMPNIDSVSWNAMISALGQHGHGRE 514
Query: 312 SLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMV 371
+L++F M + G+ PD ++ + VL+AC+++G V EG FESMK + + P +HY ++
Sbjct: 515 ALELFDRMVAEGIYPDRISFLTVLTACNHSGLVDEGFRYFESMKRDFGIIPGEDHYTRLI 574
Query: 372 DLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAG 431
DLLGRAG++ +A LI+ MPFEP IW ++L CRT ++L AA +L ++ P++ G
Sbjct: 575 DLLGRAGRIGEARDLIKTMPFEPTPSIWEAILSGCRTSGDMELGAHAADQLFKMTPQHDG 634
Query: 432 PYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHP 491
YILLSN Y++ G + D A +RK MR R V K PGCSWIE KVH+F D HPE
Sbjct: 635 TYILLSNTYSAAGCWVDAARVRKLMRDRGVKKEPGCSWIEAGNKVHVFLVGD-TKHPEAH 693
Query: 492 MIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPI 551
+ + LE +G +R+ GY PD+ VLHD++ +K H L HSE+LAV +GL+ LP G +
Sbjct: 694 EVYKFLEMVGAKMRKLGYVPDTKVVLHDMEPHQKEHILFAHSERLAVGFGLLNLPPGATV 753
Query: 552 RVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
V+KNLR+C DCH+AI +SK +GREI++RD RFHHFKDG CSC +YW
Sbjct: 754 TVLKNLRICDDCHAAIMFMSKAVGREIVVRDVRRFHHFKDGECSCGNYW 802
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 114/439 (25%), Positives = 196/439 (44%), Gaps = 55/439 (12%)
Query: 22 ITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMP--EKDVVAQTNMVLGYC 79
+ A TLF P VS T ++ + R+ A FD +P +D V ++ Y
Sbjct: 75 LPAAATLFCADPCP--VSATSLVAAYAAADRLPAAVSFFDAVPPARRDTVLHNAVISAYA 132
Query: 80 QDGRVDEGREIFDEMPKKNVI-----SWTTMIS--GYVNNNRIDVARKLF-EVMPEKNEV 131
+ +F + + S+T ++S G++ N + +L V+
Sbjct: 133 RASHAAPAVAVFRSLLASGSLRPDDYSFTALLSAGGHLPNISVRHCAQLHCSVLKSGAGG 192
Query: 132 SWT---AMLMGYTQCGR---IQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFD 185
+ + A++ Y +C +DA ++ MP K + +M++G + G+V AR VF+
Sbjct: 193 ALSVCNALVALYMKCESPEATRDARKVLDEMPNKDDLTWTTMVVGYVRRGDVGAARSVFE 252
Query: 186 QMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDH 245
++ K D W+ MI Y G +E +LF M E V ++ + SVLS CA++ H
Sbjct: 253 EVDGKFDVVWNAMISGYVHSGMAVEAFELFRRMVLERVPLDEFTFTSVLSACANVGLFAH 312
Query: 246 GRQVHAQLVRCQFD----VDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIIS 301
G+ VH Q++R Q + + V + L+T Y KCG + + IFDN KD+V WN+I+S
Sbjct: 313 GKSVHGQIIRLQPNFVPEAALPVNNALVTFYSKCGNIAVARRIFDNMTLKDVVSWNTILS 372
Query: 302 GYAQY-------------------------------GLGEKSLKVFHEMFSSGVMPDDVT 330
GY + G E +LK+F++M S V P D T
Sbjct: 373 GYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFAEDALKLFNKMRSENVKPCDYT 432
Query: 331 LVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAM 390
G ++AC G +K G+++ + + E ++ + R G V++A + M
Sbjct: 433 YAGAIAACGELGALKHGKQLHGHI-VQLGFEGSNSAGNALITMYARCGAVKEAHLMFLVM 491
Query: 391 PFEPDAIIWGSLLGACRTH 409
P D++ W +++ A H
Sbjct: 492 P-NIDSVSWNAMISALGQH 509
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 99/407 (24%), Positives = 168/407 (41%), Gaps = 90/407 (22%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MP ++ ++WT MV GYV G + A ++F ++ K V W M+ G++ +A LF
Sbjct: 223 MPNKDDLTWTTMVVGYVRRGDVGAARSVFEEVDGKFDVVWNAMISGYVHSGMAVEAFELF 282
Query: 61 -------------------------------------------DMMPEKDVVAQTNMVLG 77
+ +PE + +V
Sbjct: 283 RRMVLERVPLDEFTFTSVLSACANVGLFAHGKSVHGQIIRLQPNFVPEAALPVNNALVTF 342
Query: 78 YCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAML 137
Y + G + R IFD M K+V+SW T++SGYV ++ +D A ++FE MP KNE+SW M+
Sbjct: 343 YSKCGNIAVARRIFDNMTLKDVVSWNTILSGYVESSCLDKAVEVFEEMPYKNELSWMVMV 402
Query: 138 MGYTQCGRIQDAWELFKAMPMKSV------------------------------------ 161
GY G +DA +LF M ++V
Sbjct: 403 SGYVHGGFAEDALKLFNKMRSENVKPCDYTYAGAIAACGELGALKHGKQLHGHIVQLGFE 462
Query: 162 ---VASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLM 218
A N++I + G V++A ++F M D +W+ MI + G+ E ++LF M
Sbjct: 463 GSNSAGNALITMYARCGAVKEAHLMFLVMPNIDSVSWNAMISALGQHGHGREALELFDRM 522
Query: 219 QKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDV----DVYVASVLITMYIK 274
EG+ + S ++VL+ C +D G + + R F + D Y + LI + +
Sbjct: 523 VAEGIYPDRISFLTVLTACNHSGLVDEGFRYFESMKR-DFGIIPGEDHY--TRLIDLLGR 579
Query: 275 CGELVKGKLIFDNFASKDI-VMWNSIISGYAQYGLGEKSLKVFHEMF 320
G + + + + + +W +I+SG G E ++F
Sbjct: 580 AGRIGEARDLIKTMPFEPTPSIWEAILSGCRTSGDMELGAHAADQLF 626
>gi|357440933|ref|XP_003590744.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479792|gb|AES60995.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 795
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 226/598 (37%), Positives = 356/598 (59%), Gaps = 19/598 (3%)
Query: 21 MITEAGTLFWQMPEKNVV--SWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGY 78
++ A +F + P+ + SWT M+ G++R+ + AR L D + VA M+ GY
Sbjct: 199 LMASARKVFDETPKNQIYEPSWTTMIAGYVRNDDLVAARELLDGLTYPIDVAWNAMISGY 258
Query: 79 CQDGRVDEGREIFDEMPKKNV----ISWTTMIS---------GYVNNNRIDVARKLFEVM 125
+ G +E + F M + ++T++IS G N R L V+
Sbjct: 259 VRRGLYEEAFDTFRRMHSMGIQEDEYTYTSLISACGSCNEKMGMFNCGRQVHGYILRTVV 318
Query: 126 PEKNEVSWT---AMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARV 182
+ + A++ YT+ R+ +A +F MP++ +++ N+++ G +++A
Sbjct: 319 EPSHHFVLSVNNALITFYTKYDRMIEARRVFDKMPVRDIISWNAVLSGYVNAQRIEEANS 378
Query: 183 VFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLAS 242
+F +M E++ TW+ MI + G+ E + LF M+ EG+ + ++ C+ L S
Sbjct: 379 IFSEMPERNVLTWTVMISGLAQNGFGEEGLKLFNQMKSEGLEPCDYAFAGAITACSVLGS 438
Query: 243 LDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISG 302
LD+G+Q+H+Q++R D + + LITMY +CG + + +F D V WN++I+
Sbjct: 439 LDNGQQIHSQVIRLGHDSGLSAGNALITMYSRCGVVESAESVFLTMPYVDSVSWNAMIAA 498
Query: 303 YAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEP 362
AQ+G G K++++F +M ++PD +T + +L+AC++ G +KEGR F++M ++Y + P
Sbjct: 499 LAQHGHGVKAIELFEQMMKEDILPDRITFLTILTACNHAGLIKEGRHYFDTMCTRYGITP 558
Query: 363 KTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKL 422
+HYA ++DLL RAG A +I++MPFE A IW +LL CR H ++L AA +L
Sbjct: 559 GEDHYARLIDLLCRAGMFLKAQSVIKSMPFEAGAPIWEALLAGCRIHGNMELGIQAADRL 618
Query: 423 LQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGR 482
L+L P G YI+LSN+YA+ G++ +VA +R MR+R V K PGCSW+EVE VH+F
Sbjct: 619 LELIPGQDGTYIILSNMYAALGQWDEVARVRLLMRERGVKKEPGCSWVEVENMVHVFLVD 678
Query: 483 DCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGL 542
D HPE + L+++ +++ GY PD+ FVLHD++ E K HSL HSEKLAV YG+
Sbjct: 679 D-ARHPEVQAVYTYLQQLVNEMKKLGYVPDTKFVLHDMESEHKEHSLSTHSEKLAVVYGI 737
Query: 543 VKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
+KLP G IRV KNLR+CGDCH+A K ISKV+ REI++RD RFHHFK+G CSC +YW
Sbjct: 738 MKLPLGATIRVFKNLRICGDCHNAFKYISKVVEREIVVRDRKRFHHFKNGECSCGNYW 795
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 118/501 (23%), Positives = 206/501 (41%), Gaps = 101/501 (20%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
+ + N VS T ++ V ++T + N ++ + + S I AR+LF
Sbjct: 11 LTQLNHVSTTQIIARAVHAHILTSGF-------KPNTFILNRLINIYCKSSNITYARKLF 63
Query: 61 DMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPK--KNVISWTTMISGYVNNNRIDVA 118
D +P+ D+VA+T ++ Y G V +++F+ P ++ +S+ MI+ Y + N A
Sbjct: 64 DKIPKPDIVARTTLLSAYSSSGNVKLAQQLFNATPLTIRDTVSYNAMITAYSHGNDGHAA 123
Query: 119 RKLFEVM------PEKNEVS----------------------------------WTAMLM 138
LF M P+ S A+L
Sbjct: 124 LNLFVQMKRYGFLPDPFTFSSVLSALSLIADEERHCQMLHCEVIKLGTLLIPSVTNALLS 183
Query: 139 GYTQCGR---------IQDAWELFKAMPMKSVVASN--SMILGLGQNGEVQKARVVFDQM 187
Y C + A ++F P + + +MI G +N ++ AR + D +
Sbjct: 184 CYVCCASSPLVKSSQLMASARKVFDETPKNQIYEPSWTTMIAGYVRNDDLVAARELLDGL 243
Query: 188 REKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCAS----LASL 243
D W+ MI Y R+G E D F M G++ + + S++S C S +
Sbjct: 244 TYPIDVAWNAMISGYVRRGLYEEAFDTFRRMHSMGIQEDEYTYTSLISACGSCNEKMGMF 303
Query: 244 DHGRQVHAQLVRCQFDVD----VYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSI 299
+ GRQVH ++R + + V + LIT Y K +++ + +FD +DI+ WN++
Sbjct: 304 NCGRQVHGYILRTVVEPSHHFVLSVNNALITFYTKYDRMIEARRVFDKMPVRDIISWNAV 363
Query: 300 ISGY-------------------------------AQYGLGEKSLKVFHEMFSSGVMPDD 328
+SGY AQ G GE+ LK+F++M S G+ P D
Sbjct: 364 LSGYVNAQRIEEANSIFSEMPERNVLTWTVMISGLAQNGFGEEGLKLFNQMKSEGLEPCD 423
Query: 329 VTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIE 388
G ++ACS G + G++I S + + ++ + R G VE A +
Sbjct: 424 YAFAGAITACSVLGSLDNGQQI-HSQVIRLGHDSGLSAGNALITMYSRCGVVESAESVFL 482
Query: 389 AMPFEPDAIIWGSLLGACRTH 409
MP+ D++ W +++ A H
Sbjct: 483 TMPY-VDSVSWNAMIAALAQH 502
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 78/327 (23%), Positives = 131/327 (40%), Gaps = 86/327 (26%)
Query: 8 SWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIR----DSRIDDARRLFDMM 63
SWT M+ GYV + A L + V+W M+ G++R + D RR+ M
Sbjct: 219 SWTTMIAGYVRNDDLVAARELLDGLTYPIDVAWNAMISGYVRRGLYEEAFDTFRRMHSMG 278
Query: 64 PEKDVVAQTNMV--LGYCQD---------------------------------------- 81
++D T+++ G C +
Sbjct: 279 IQEDEYTYTSLISACGSCNEKMGMFNCGRQVHGYILRTVVEPSHHFVLSVNNALITFYTK 338
Query: 82 -GRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGY 140
R+ E R +FD+MP +++ISW ++SGYVN RI+ A +F MPE+N ++WT M+ G
Sbjct: 339 YDRMIEARRVFDKMPVRDIISWNAVLSGYVNAQRIEEANSIFSEMPERNVLTWTVMISGL 398
Query: 141 TQCGRIQDAWELFKAMPMK---------------------------------------SV 161
Q G ++ +LF M + +
Sbjct: 399 AQNGFGEEGLKLFNQMKSEGLEPCDYAFAGAITACSVLGSLDNGQQIHSQVIRLGHDSGL 458
Query: 162 VASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKE 221
A N++I + G V+ A VF M D +W+ MI + G+ ++ I+LF M KE
Sbjct: 459 SAGNALITMYSRCGVVESAESVFLTMPYVDSVSWNAMIAALAQHGHGVKAIELFEQMMKE 518
Query: 222 GVRVNFPSLISVLSVCASLASLDHGRQ 248
+ + + +++L+ C + GR
Sbjct: 519 DILPDRITFLTILTACNHAGLIKEGRH 545
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 100/199 (50%), Gaps = 12/199 (6%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MP R+++SW A++ GYV I EA ++F +MPE+NV++WTVM+ G ++ ++ +LF
Sbjct: 352 MPVRDIISWNAVLSGYVNAQRIEEANSIFSEMPERNVLTWTVMISGLAQNGFGEEGLKLF 411
Query: 61 DMMPEKDV----VAQTNMVLGYCQDGRVDEGREIFDEMPK----KNVISWTTMISGYVNN 112
+ M + + A + G +D G++I ++ + + + +I+ Y
Sbjct: 412 NQMKSEGLEPCDYAFAGAITACSVLGSLDNGQQIHSQVIRLGHDSGLSAGNALITMYSRC 471
Query: 113 NRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASN----SMI 168
++ A +F MP + VSW AM+ Q G A ELF+ M + ++ +++
Sbjct: 472 GVVESAESVFLTMPYVDSVSWNAMIAALAQHGHGVKAIELFEQMMKEDILPDRITFLTIL 531
Query: 169 LGLGQNGEVQKARVVFDQM 187
G +++ R FD M
Sbjct: 532 TACNHAGLIKEGRHYFDTM 550
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 39/195 (20%), Positives = 84/195 (43%), Gaps = 16/195 (8%)
Query: 246 GRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQ 305
R VHA ++ F + ++ + LI +Y K + + +FD DIV +++S Y+
Sbjct: 24 ARAVHAHILTSGFKPNTFILNRLINIYCKSSNITYARKLFDKIPKPDIVARTTLLSAYSS 83
Query: 306 YGLGEKSLKVFHEMFSSG--VMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPK 363
G ++K+ ++F++ + D V+ +++A S+ +F MK +Y P
Sbjct: 84 SG----NVKLAQQLFNATPLTIRDTVSYNAMITAYSHGNDGHAALNLFVQMK-RYGFLPD 138
Query: 364 TEHYACMVDLLGRAGQVEDAMKLIEA---------MPFEPDAIIWGSLLGACRTHMKLDL 414
++ ++ L E +++ +P +A++ + A +K
Sbjct: 139 PFTFSSVLSALSLIADEERHCQMLHCEVIKLGTLLIPSVTNALLSCYVCCASSPLVKSSQ 198
Query: 415 AEVAAKKLLQLEPKN 429
+A+K+ PKN
Sbjct: 199 LMASARKVFDETPKN 213
>gi|225434622|ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 743
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 247/651 (37%), Positives = 370/651 (56%), Gaps = 53/651 (8%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM-------PEKNVVSW------------- 40
+P N+ +W ++R Y ++ +F +M P+K +
Sbjct: 95 IPHPNLYTWNTLIRAYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEELFT 154
Query: 41 ---------TVMLGG--FIRDSRIDD---------ARRLFDMMPEKDVVAQTNMVLGYCQ 80
V+LG FI +S I R+F +P +DVV+ +M+ + Q
Sbjct: 155 GKAFHGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVNIPRRDVVSWNSMITAFVQ 214
Query: 81 DGRVDEGREIFDEMPKKNV----ISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWT-- 134
G +E E+F EM +NV I+ ++S + + R + + E+N + +
Sbjct: 215 GGCPEEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYI-ERNRIGESLT 273
Query: 135 ---AMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKD 191
AML YT+CG ++DA LF MP K +V+ +M++G + GE A+ +FD M +D
Sbjct: 274 LSNAMLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGIFDAMPNQD 333
Query: 192 DATWSGMIKVYERKGYELEVIDLFTLMQ-KEGVRVNFPSLISVLSVCASLASLDHGRQVH 250
A W+ +I YE+ G E ++LF +Q + + + +L+S LS CA L ++D G +H
Sbjct: 334 IAAWNALISAYEQCGKPKEALELFHELQLSKTAKPDEVTLVSTLSACAQLGAMDLGGWIH 393
Query: 251 AQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGE 310
+ + ++ ++ + LI MY KCG+L K ++F + KD+ +W+++I+G A +G G+
Sbjct: 394 VYIKKQGMKLNCHLTTSLIDMYCKCGDLQKALMVFHSVERKDVFVWSAMIAGLAMHGHGK 453
Query: 311 KSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACM 370
++ +F +M V P+ VT +L ACS+ G V+EGR F M+ Y V P +HYACM
Sbjct: 454 DAIALFSKMQEDKVKPNAVTFTNILCACSHVGLVEEGRTFFNQMELVYGVLPGVKHYACM 513
Query: 371 VDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNA 430
VD+LGRAG +E+A++LIE MP P A +WG+LLGAC H + LAE A +L++LEP N
Sbjct: 514 VDILGRAGLLEEAVELIEKMPMAPAASVWGALLGACTIHENVVLAEQACSQLIELEPGNH 573
Query: 431 GPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEH 490
G Y+LLSNIYA G++ V+ LRK MR + K PGCS IEV+ VH F D SHP
Sbjct: 574 GAYVLLSNIYAKAGKWDRVSGLRKLMRDVGLKKEPGCSSIEVDGIVHEFLVGD-NSHPSA 632
Query: 491 PMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEE-KVHSLRYHSEKLAVAYGLVKLPEGV 549
I L++I L GY P+ S +L V+EE+ K +L HSEKLA+A+GL+ +
Sbjct: 633 KKIYAKLDEIVARLETIGYVPNKSHLLQLVEEEDVKEQALFLHSEKLAIAFGLISTGQSQ 692
Query: 550 PIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
PIR++KNLRVCGDCHS KL+SK+ REI+LRD RFHHF++G CSC DYW
Sbjct: 693 PIRIVKNLRVCGDCHSVAKLVSKLYDREILLRDRYRFHHFREGHCSCMDYW 743
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 88/368 (23%), Positives = 174/368 (47%), Gaps = 45/368 (12%)
Query: 84 VDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEK-----NEVSWTAMLM 138
+D +++FD++P N+ +W T+I Y +++ + +F M + ++ ++ ++
Sbjct: 85 LDYAQQVFDQIPHPNLYTWNTLIRAYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIK 144
Query: 139 GYTQCGRIQDAWELFKAMPMKSVVAS-----NSMILGLGQNGEVQKARVVFDQMREKDDA 193
++ + + F M +K ++ S NS+I + GE+ VF + +D
Sbjct: 145 AASELEELFTG-KAFHGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVNIPRRDVV 203
Query: 194 TWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQL 253
+W+ MI + + G E ++LF M+ + V+ N +++ VLS CA + + GR VH+ +
Sbjct: 204 SWNSMITAFVQGGCPEEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYI 263
Query: 254 VRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIV------------------- 294
R + + +++ ++ MY KCG + K +FD KDIV
Sbjct: 264 ERNRIGESLTLSNAMLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQ 323
Query: 295 ------------MWNSIISGYAQYGLGEKSLKVFHEM-FSSGVMPDDVTLVGVLSACSYT 341
WN++IS Y Q G +++L++FHE+ S PD+VTLV LSAC+
Sbjct: 324 GIFDAMPNQDIAAWNALISAYEQCGKPKEALELFHELQLSKTAKPDEVTLVSTLSACAQL 383
Query: 342 GKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGS 401
G + G I +K K ++ ++D+ + G ++ A+ + ++ D +W +
Sbjct: 384 GAMDLGGWIHVYIK-KQGMKLNCHLTTSLIDMYCKCGDLQKALMVFHSVE-RKDVFVWSA 441
Query: 402 LLGACRTH 409
++ H
Sbjct: 442 MIAGLAMH 449
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 143/290 (49%), Gaps = 14/290 (4%)
Query: 180 ARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGV----RVNFPSLISVLS 235
A+ VFDQ+ + TW+ +I+ Y + + +F M + + FP LI S
Sbjct: 88 AQQVFDQIPHPNLYTWNTLIRAYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAAS 147
Query: 236 VCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVM 295
L L G+ H +++ DV++ + LI Y KCGEL G +F N +D+V
Sbjct: 148 ---ELEELFTGKAFHGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVNIPRRDVVS 204
Query: 296 WNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMK 355
WNS+I+ + Q G E++L++F EM + V P+ +T+VGVLSAC+ + GR + ++
Sbjct: 205 WNSMITAFVQGGCPEEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIE 264
Query: 356 SKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLA 415
+ E T A M+D+ + G VEDA +L + MP E D + W ++L + D
Sbjct: 265 RNRIGESLTLSNA-MLDMYTKCGSVEDAKRLFDKMP-EKDIVSWTTMLVGYAKIGEYD-- 320
Query: 416 EVAAKKLLQLEP-KNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKP 464
AA+ + P ++ + L + Y G+ + EL ++ KP
Sbjct: 321 --AAQGIFDAMPNQDIAAWNALISAYEQCGKPKEALELFHELQLSKTAKP 368
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 91/211 (43%), Gaps = 12/211 (5%)
Query: 225 VNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYI--KCGELVKGK 282
N P+L S++ C+ L +Q+HAQ++R D + AS LIT L +
Sbjct: 34 ANHPTL-SLIDQCSETKQL---KQIHAQMLRTGLFFDPFSASRLITAAALSPFPSLDYAQ 89
Query: 283 LIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMF-SSGVMPDDVTLVGVLSACSYT 341
+FD ++ WN++I YA +SL +F M S PD T ++ A S
Sbjct: 90 QVFDQIPHPNLYTWNTLIRAYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAASEL 149
Query: 342 GKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGS 401
++ G+ F M K L+ ++ + G++ ++ +P D + W S
Sbjct: 150 EELFTGKA-FHGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVNIP-RRDVVSWNS 207
Query: 402 LLGACRTHMKLDLAEVAAKKLLQLEPKNAGP 432
++ A ++ E A + ++E +N P
Sbjct: 208 MITA---FVQGGCPEEALELFQEMETQNVKP 235
>gi|297807711|ref|XP_002871739.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317576|gb|EFH47998.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 850
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 252/664 (37%), Positives = 371/664 (55%), Gaps = 65/664 (9%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEK-----------NVVSWTVMLG---- 45
MP +VVSW +++ Y + G A +F +M + NV+ +G
Sbjct: 188 MPVWDVVSWNSIIESYAKLGKPKMALEMFSKMTNEFGFRPDDITLVNVLPPCASVGTRSL 247
Query: 46 -----GFIRDSRI--------------------DDARRLFDMMPEKDVVAQTNMVLGYCQ 80
GF S + D+A +F MP KDVV+ MV GY Q
Sbjct: 248 GKQFHGFAVTSEMIQNMFVGNCLVDMYAKFGMMDEANTVFSNMPVKDVVSWNAMVAGYSQ 307
Query: 81 DGRVDEGREIFDEMP----KKNVISWTTMISGYVNNN----RIDVARKLFEVMPEKNEVS 132
GR ++ +F++M K +V++W+ ISGY + V R++ + NEV+
Sbjct: 308 IGRFEDAVRLFEQMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVT 367
Query: 133 WTAMLMGYT-----------QCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKAR 181
++L G C I+ +L K + N +I + +V AR
Sbjct: 368 LISVLSGCASVGALMHGKEIHCYAIKYPMDLRKNGHGDENMVINQLIDMYAKCKKVDIAR 427
Query: 182 VVFDQM--REKDDATWSGMIKVYERKGYELEVIDLFTLMQKEG--VRVNFPSLISVLSVC 237
+FD + +E+D TW+ MI Y + G + ++L + M +E R N ++ L C
Sbjct: 428 AMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVAC 487
Query: 238 ASLASLDHGRQVHAQLVRCQFD-VDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMW 296
ASLA+L G+Q+HA +R Q + V ++V++ LI MY KCG++ +L+FDN K+ V W
Sbjct: 488 ASLAALSIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGDIGDARLVFDNMMEKNEVTW 547
Query: 297 NSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKS 356
S+++GY +G GE++L +F EM G D VTL+ VL ACS++G + +G E F MK+
Sbjct: 548 TSLMTGYGMHGYGEEALGIFEEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKT 607
Query: 357 KYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAE 416
+ V P EHYAC+VDLLGRAG++ A++LIE MP EP ++W +LL CR H K++L E
Sbjct: 608 DFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVALLSCCRIHGKVELGE 667
Query: 417 VAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKV 476
AAKK+ +L N G Y LLSN+YA+ GR+ DV +R MR + + K PGCSW+E K
Sbjct: 668 YAAKKITELASNNDGSYTLLSNMYANAGRWKDVTRIRSLMRHKGIKKRPGCSWVEGIKGT 727
Query: 477 HMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKL 536
F D +HP I ++L +++ GY P++ F LHDVD+EEK L HSEKL
Sbjct: 728 TTFFVGD-KTHPHAKEIYQVLSDHMQRIKDIGYVPETGFALHDVDDEEKDDLLFEHSEKL 786
Query: 537 AVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSC 596
A+AYG++ P+G IR+ KNLRVCGDCH+A +S+++ EIILRD++RFHHFK+GLCSC
Sbjct: 787 ALAYGILTTPQGAAIRITKNLRVCGDCHTAFTYMSRIIDHEIILRDSSRFHHFKNGLCSC 846
Query: 597 RDYW 600
+ YW
Sbjct: 847 KGYW 850
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 120/471 (25%), Positives = 212/471 (45%), Gaps = 66/471 (14%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQM------PEKNVVSWTVMLGGFIRDSRIDDA 56
+ V W +++R Y G + + F M P+ + G I R D+
Sbjct: 89 DAGVYHWNSLIRSYGNNGRANKCLSSFCLMHSLSWTPDNYTFPFVFKACGEISSVRCGDS 148
Query: 57 RRLFDMMPE--KDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNR 114
+ +V +V Y + G + + R++FDEMP +V+SW ++I Y +
Sbjct: 149 SHALSRVTGFMSNVFVGNALVAMYSRCGSLSDARKVFDEMPVWDVVSWNSIIESYAKLGK 208
Query: 115 IDVARKLF-----------------EVMPEKNEVSWTA-----------------MLMG- 139
+A ++F V+P V + M +G
Sbjct: 209 PKMALEMFSKMTNEFGFRPDDITLVNVLPPCASVGTRSLGKQFHGFAVTSEMIQNMFVGN 268
Query: 140 -----YTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREK---- 190
Y + G + +A +F MP+K VV+ N+M+ G Q G + A +F+QM+E+
Sbjct: 269 CLVDMYAKFGMMDEANTVFSNMPVKDVVSWNAMVAGYSQIGRFEDAVRLFEQMQEEKIKM 328
Query: 191 DDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVH 250
D TWS I Y ++G E + + M G++ N +LISVLS CAS+ +L HG+++H
Sbjct: 329 DVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIH 388
Query: 251 AQLVRCQFDV-------DVYVASVLITMYIKCGELVKGKLIFDNFASK--DIVMWNSIIS 301
++ D+ + V + LI MY KC ++ + +FD+ + K D+V W +I
Sbjct: 389 CYAIKYPMDLRKNGHGDENMVINQLIDMYAKCKKVDIARAMFDSLSPKERDVVTWTVMIG 448
Query: 302 GYAQYGLGEKSLKVFHEMFSSGVM--PDDVTLVGVLSACSYTGKVKEGREIFE-SMKSKY 358
GY+Q+G K+L++ EMF P+ T+ L AC+ + G++I +++++
Sbjct: 449 GYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALSIGKQIHAYALRNQQ 508
Query: 359 LVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTH 409
P C++D+ + G + DA + + M E + + W SL+ H
Sbjct: 509 NAVPLFVS-NCLIDMYAKCGDIGDARLVFDNM-MEKNEVTWTSLMTGYGMH 557
>gi|15221566|ref|NP_177059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75333633|sp|Q9CAA8.1|PP108_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g68930
gi|12323213|gb|AAG51585.1|AC011665_6 hypothetical protein [Arabidopsis thaliana]
gi|332196743|gb|AEE34864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 743
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 232/679 (34%), Positives = 378/679 (55%), Gaps = 81/679 (11%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
+P+ N+ SW ++ Y + G+I+E + F ++P+++ V+W V++ G+ + A + +
Sbjct: 67 IPQPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAY 126
Query: 61 DMMP----------------------------------------EKDVVAQTNMVLGYCQ 80
+ M E ++ + ++ Y
Sbjct: 127 NTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYAN 186
Query: 81 DGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGY 140
G + + +++F + +N + + +++ G + I+ A +LF M EK+ VSW AM+ G
Sbjct: 187 VGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGM-EKDSVSWAAMIKGL 245
Query: 141 TQCGRIQDAWELFKAM----------PMKSVVASNSMILGLGQNGEVQK----------- 179
Q G ++A E F+ M P SV+ + + + + ++
Sbjct: 246 AQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHI 305
Query: 180 ------------------ARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKE 221
A+ VFD+M++K+ +W+ M+ Y + G E + +F MQ+
Sbjct: 306 YVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRS 365
Query: 222 GVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKG 281
G+ + +L +S CA+++SL+ G Q H + + V V++ L+T+Y KCG++
Sbjct: 366 GIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDS 425
Query: 282 KLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYT 341
+F+ +D V W +++S YAQ+G +++++F +M G+ PD VTL GV+SACS
Sbjct: 426 TRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRA 485
Query: 342 GKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGS 401
G V++G+ F+ M S+Y + P HY+CM+DL R+G++E+AM+ I MPF PDAI W +
Sbjct: 486 GLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTT 545
Query: 402 LLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNV 461
LL ACR L++ + AA+ L++L+P + Y LLS+IYAS+G++ VA+LR+ MR++NV
Sbjct: 546 LLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNV 605
Query: 462 IKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVD 521
K PG SWI+ + K+H F+ D S P I LE++ + + GY PD+SFV HDV+
Sbjct: 606 KKEPGQSWIKWKGKLHSFSADD-ESSPYLDQIYAKLEELNNKIIDNGYKPDTSFVHHDVE 664
Query: 522 EEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILR 581
E KV L YHSE+LA+A+GL+ +P G PIRV KNLRVC DCH+A K IS V GREI++R
Sbjct: 665 EAVKVKMLNYHSERLAIAFGLIFVPSGQPIRVGKNLRVCVDCHNATKHISSVTGREILVR 724
Query: 582 DANRFHHFKDGLCSCRDYW 600
DA RFH FKDG CSC D+W
Sbjct: 725 DAVRFHRFKDGTCSCGDFW 743
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 109/390 (27%), Positives = 190/390 (48%), Gaps = 43/390 (11%)
Query: 56 ARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRI 115
ARR+FD +P+ ++ + N++L Y + G + E F+++P ++ ++W +I GY + +
Sbjct: 60 ARRVFDRIPQPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLV 119
Query: 116 DVARKLFEVMPEKNEVSWT----------------------------------------A 135
A K + M + T
Sbjct: 120 GAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSP 179
Query: 136 MLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATW 195
+L Y G I DA ++F + ++ V NS++ GL G ++ A +F M EKD +W
Sbjct: 180 LLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGM-EKDSVSW 238
Query: 196 SGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVR 255
+ MIK + G E I+ F M+ +G++++ SVL C L +++ G+Q+HA ++R
Sbjct: 239 AAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIR 298
Query: 256 CQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKV 315
F +YV S LI MY KC L K +FD K++V W +++ GY Q G E+++K+
Sbjct: 299 TNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKI 358
Query: 316 FHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLG 375
F +M SG+ PD TL +SAC+ ++EG + + L+ T + +V L G
Sbjct: 359 FLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNS-LVTLYG 417
Query: 376 RAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
+ G ++D+ +L M DA+ W +++ A
Sbjct: 418 KCGDIDDSTRLFNEMNVR-DAVSWTAMVSA 446
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 92/447 (20%), Positives = 165/447 (36%), Gaps = 112/447 (25%)
Query: 89 EIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQD 148
I +P + ++ Y AR++F+ +P+ N SW +L+ Y++ G I +
Sbjct: 31 NIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKAGLISE 90
Query: 149 AWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYE 208
F+ +P ++D TW+ +I+ Y G
Sbjct: 91 MESTFEKLP-------------------------------DRDGVTWNVLIEGYSLSGLV 119
Query: 209 LEVIDLF-TLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASV 267
+ + T+M+ + +L+++L + +S + G+Q+H Q+++ F+ + V S
Sbjct: 120 GAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSP 179
Query: 268 LITMYIKCGELVKGKLIFDNFASKDIVMWNSI---------------------------- 299
L+ MY G + K +F ++ VM+NS+
Sbjct: 180 LLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWA 239
Query: 300 --ISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREI------- 350
I G AQ GL +++++ F EM G+ D VL AC G + EG++I
Sbjct: 240 AMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRT 299
Query: 351 ----------------------------FESMKSKYLVEPKTEHYACMVDLLGRAGQVED 382
F+ MK K +V + MV G+ G+ E+
Sbjct: 300 NFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVS-----WTAMVVGYGQTGRAEE 354
Query: 383 AMKLIEAMP---FEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSN- 438
A+K+ M +PD G + AC L+ K + Y+ +SN
Sbjct: 355 AVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAIT---SGLIHYVTVSNS 411
Query: 439 ---IYASQGRFHDVAELRKNMRKRNVI 462
+Y G D L M R+ +
Sbjct: 412 LVTLYGKCGDIDDSTRLFNEMNVRDAV 438
>gi|115451769|ref|NP_001049485.1| Os03g0235200 [Oryza sativa Japonica Group]
gi|108707037|gb|ABF94832.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113547956|dbj|BAF11399.1| Os03g0235200 [Oryza sativa Japonica Group]
gi|125585525|gb|EAZ26189.1| hypothetical protein OsJ_10058 [Oryza sativa Japonica Group]
gi|215706461|dbj|BAG93317.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 641
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 228/566 (40%), Positives = 340/566 (60%), Gaps = 21/566 (3%)
Query: 53 IDDARRLFDMMPEKDVVAQTNMVLGYCQDGR-VDEGREIFDEMPKKNVISWTTMISGYVN 111
+ DA LF + D+ + ++ + R + RE+FD MP+++ +W+ ++SGY
Sbjct: 79 LPDALALFSSIAAPDICSHNTLISALSRSPRHLPSARELFDRMPQRDHFAWSALVSGYTR 138
Query: 112 NNRIDVARKLFEVMPEK-------NEVSWTAMLMGYT--QCGRIQDAWELFKAMPMKSVV 162
+ + + A L+ M E+ NE + ++ L +CGR EL + + +
Sbjct: 139 HGQPEAALALYRRMQEEPGNDGADNEFTASSALAAAAAARCGRA--GRELHCHVVRRGID 196
Query: 163 AS-------NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLF 215
A+ +++ + G V AR VFD+M +D +W+ M++ Y G E LF
Sbjct: 197 AAGGDAVLWSALADMYAKCGRVDDARRVFDRMPVRDAVSWTAMVERYFDGGRGGEGFRLF 256
Query: 216 T-LMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIK 274
+++ GVR N + VL CA A GRQVH ++ + + S L+ MY K
Sbjct: 257 LHMLRTRGVRPNEFTYAGVLRACAQFAVESFGRQVHGRMAKSGTGDSCFAESALLRMYSK 316
Query: 275 CGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGV 334
CG++ +F+ A D+V W ++ISGYAQ G E++L+ F SG+ PD VT VGV
Sbjct: 317 CGDMGSAVRVFEAMAKPDLVSWTAVISGYAQNGQPEEALRYFDMFLRSGIKPDHVTFVGV 376
Query: 335 LSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEP 394
LSAC++ G V +G EIF S+K +Y +E +HYAC++DLL R+GQ E A K+I M +P
Sbjct: 377 LSACAHAGLVDKGLEIFHSIKEQYCIEHTADHYACVIDLLSRSGQFERAEKMIGNMAVKP 436
Query: 395 DAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRK 454
+ +W SLLG CR H + LA AA+ L ++EP+N Y+ L+NIYAS G F +V ++R+
Sbjct: 437 NKFLWASLLGGCRIHKNVGLARRAAEALFEIEPENPATYVTLANIYASVGLFDEVEDVRR 496
Query: 455 NMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSS 514
M + + K P SWIEV ++VH+F D SHP+ I +L+K+ + E GY D
Sbjct: 497 IMESKGITKMPASSWIEVGRRVHVFLVGD-KSHPKADEIYALLKKLYVKMVEEGYVADIE 555
Query: 515 FVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVM 574
FVLHDV++E+K + YHSE+LAVA+G++ PEG PI+V KNLR+CGDCH+AIKLIS+++
Sbjct: 556 FVLHDVEDEQKEQDIGYHSERLAVAFGIIATPEGSPIKVFKNLRICGDCHAAIKLISQIV 615
Query: 575 GREIILRDANRFHHFKDGLCSCRDYW 600
R+II+RD+NRFHHFKDG+CSCRDYW
Sbjct: 616 QRDIIVRDSNRFHHFKDGICSCRDYW 641
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 85/398 (21%), Positives = 166/398 (41%), Gaps = 74/398 (18%)
Query: 22 ITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEK--------------- 66
+ A LF +MP+++ +W+ ++ G+ R + + A L+ M E+
Sbjct: 111 LPSARELFDRMPQRDHFAWSALVSGYTRHGQPEAALALYRRMQEEPGNDGADNEFTASSA 170
Query: 67 ------------------------------DVVAQTNMVLGYCQDGRVDEGREIFDEMPK 96
D V + + Y + GRVD+ R +FD MP
Sbjct: 171 LAAAAAARCGRAGRELHCHVVRRGIDAAGGDAVLWSALADMYAKCGRVDDARRVFDRMPV 230
Query: 97 KNVISWTTMISGYVNNNRIDVARKLFEVM-----PEKNEVSWTAMLMGYTQ-----CGRI 146
++ +SWT M+ Y + R +LF M NE ++ +L Q GR
Sbjct: 231 RDAVSWTAMVERYFDGGRGGEGFRLFLHMLRTRGVRPNEFTYAGVLRACAQFAVESFGR- 289
Query: 147 QDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKG 206
Q + K+ S A ++++ + G++ A VF+ M + D +W+ +I Y + G
Sbjct: 290 QVHGRMAKSGTGDSCFAESALLRMYSKCGDMGSAVRVFEAMAKPDLVSWTAVISGYAQNG 349
Query: 207 YELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVR---CQFDVDVY 263
E + F + + G++ + + + VLS CA +D G ++ + + D Y
Sbjct: 350 QPEEALRYFDMFLRSGIKPDHVTFVGVLSACAHAGLVDKGLEIFHSIKEQYCIEHTADHY 409
Query: 264 VASVLITMYIKCGELVKGKLIFDNFASK-DIVMWNSIISG---YAQYGLGEKSLKVFHEM 319
+ +I + + G+ + + + N A K + +W S++ G + GL ++ + E
Sbjct: 410 --ACVIDLLSRSGQFERAEKMIGNMAVKPNKFLWASLLGGCRIHKNVGLARRAAEALFE- 466
Query: 320 FSSGVMPDD----VTLVGVLSACSYTGKVKEGREIFES 353
+ P++ VTL + ++ +V++ R I ES
Sbjct: 467 ----IEPENPATYVTLANIYASVGLFDEVEDVRRIMES 500
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 88/199 (44%), Gaps = 13/199 (6%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMP 64
+ V W+A+ Y + G + +A +F +MP ++ VSWT M+ + R + RLF M
Sbjct: 201 DAVLWSALADMYAKCGRVDDARRVFDRMPVRDAVSWTAMVERYFDGGRGGEGFRLFLHML 260
Query: 65 EKDVVAQTNM----VLGYCQDGRVDE-GREIFDEMPKKNV----ISWTTMISGYVNNNRI 115
V VL C V+ GR++ M K + + ++ Y +
Sbjct: 261 RTRGVRPNEFTYAGVLRACAQFAVESFGRQVHGRMAKSGTGDSCFAESALLRMYSKCGDM 320
Query: 116 DVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGL---- 171
A ++FE M + + VSWTA++ GY Q G+ ++A F + + +G+
Sbjct: 321 GSAVRVFEAMAKPDLVSWTAVISGYAQNGQPEEALRYFDMFLRSGIKPDHVTFVGVLSAC 380
Query: 172 GQNGEVQKARVVFDQMREK 190
G V K +F ++E+
Sbjct: 381 AHAGLVDKGLEIFHSIKEQ 399
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/266 (20%), Positives = 117/266 (43%), Gaps = 26/266 (9%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM-----PEKNVVSWTVMLGGFIRDSRIDD 55
MP R+ VSWTAMV Y + G E LF M N ++ +L + +
Sbjct: 228 MPVRDAVSWTAMVERYFDGGRGGEGFRLFLHMLRTRGVRPNEFTYAGVLRACAQFAVESF 287
Query: 56 ARRLFDMMPEK----DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVN 111
R++ M + A++ ++ Y + G + +F+ M K +++SWT +ISGY
Sbjct: 288 GRQVHGRMAKSGTGDSCFAESALLRMYSKCGDMGSAVRVFEAMAKPDLVSWTAVISGYAQ 347
Query: 112 NNRIDVARKLFEVM----PEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNS- 166
N + + A + F++ + + V++ +L G + E+F ++ + + +
Sbjct: 348 NGQPEEALRYFDMFLRSGIKPDHVTFVGVLSACAHAGLVDKGLEIFHSIKEQYCIEHTAD 407
Query: 167 ----MILGLGQNGEVQKARVVFDQMREKDD----ATWSGMIKVYERKGYELEVIDLFTLM 218
+I L ++G+ ++A + M K + A+ G ++++ G + +
Sbjct: 408 HYACVIDLLSRSGQFERAEKMIGNMAVKPNKFLWASLLGGCRIHKNVGLARRAAEALFEI 467
Query: 219 QKEGVRVNFPSLISVLSVCASLASLD 244
+ E N + +++ ++ AS+ D
Sbjct: 468 EPE----NPATYVTLANIYASVGLFD 489
>gi|147801369|emb|CAN74731.1| hypothetical protein VITISV_037837 [Vitis vinifera]
Length = 719
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 252/656 (38%), Positives = 367/656 (55%), Gaps = 61/656 (9%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
+ + NV S+ A++ Y +E A LF Q+PE ++VS+ ++ + A LF
Sbjct: 69 ISDPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLF 128
Query: 61 DMMPEK----DVVAQTNMVLGYCQD-GRVDEGREI-----FDEMPKKNVISWTTMISGYV 110
M E D + ++ C D G + + + FD N +++ Y
Sbjct: 129 SGMREMGLDMDXFTLSAVITACCDDVGLIGQLHSVAVSSGFDSYVSVN----NALLTYYG 184
Query: 111 NNNRIDVARKLFEVMPE-KNEVSWTAMLMGYTQCGRIQDAWELFKAM----------PMK 159
N +D A+++F M ++EVSW +M++ Y Q A LF+ M +
Sbjct: 185 KNGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLA 244
Query: 160 SVVASNSMI---------------LGLGQN---------------GEVQKARVVFDQMRE 189
SV+ + + + G QN G + R VF+++ E
Sbjct: 245 SVLTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITE 304
Query: 190 KDDATWSGMIKVYERKGYELE-VIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQ 248
D W+ M+ Y + LE ++ F MQ G R N S + V+S C++L+S G+Q
Sbjct: 305 PDLVLWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQ 364
Query: 249 VHAQLVRCQFDVD-VYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYG 307
+H+ ++ + + V + LI MY KCG L + +FD A + V NS+I+GYAQ+G
Sbjct: 365 IHSLALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHG 424
Query: 308 LGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHY 367
+ +SL +F M + P +T + VLSAC++TG+V+EG F MK K+ +EP+ EHY
Sbjct: 425 IEMESLHLFQWMLERQIAPTSITFISVLSACAHTGRVEEGWNYFNMMKEKFNIEPEAEHY 484
Query: 368 ACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEP 427
+CM+DLLGRAG++ +A LI MPF P +I W SLLGACRTH ++LA AA ++LQLEP
Sbjct: 485 SCMIDLLGRAGKLSEAENLIARMPFNPGSIGWASLLGACRTHGNIELAVKAANQVLQLEP 544
Query: 428 KNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSH 487
NA PY++LSN+YAS GR+ +VA +RK MR R V K PGCSWIEV+K++H+F D SH
Sbjct: 545 SNAAPYVVLSNMYASAGRWEEVATVRKFMRDRGVKKKPGCSWIEVKKRIHVFVAEDS-SH 603
Query: 488 PEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEE---EKVHSLRYHSEKLAVAYGLVK 544
P I LE++ G ++ AGY PD + L D EK L +HSEKLAVA+GL+
Sbjct: 604 PMIKEIYEFLEEMSGKMKRAGYVPDVRWALVKDDGTRGGEKEIRLGHHSEKLAVAFGLIS 663
Query: 545 LPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
+G P+ V+KNLR+CGDCH+AIK IS + GREI +RDA+RFH FK+G CSC DYW
Sbjct: 664 TKDGEPVLVVKNLRICGDCHNAIKFISAIAGREITVRDAHRFHCFKEGQCSCGDYW 719
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 107/423 (25%), Positives = 193/423 (45%), Gaps = 50/423 (11%)
Query: 36 NVVSWTV-----MLGGFIRDSRIDDARRLFDMMPEKDVVAQT----NMVLGYCQDGRVDE 86
N +SWT+ +L I + + + L + + + T + +L Y + GR+
Sbjct: 2 NQISWTLQRFRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAW 61
Query: 87 GREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRI 146
R+ F ++ NV S+ +I+ Y +R +A +LF+ +PE + VS+ ++ Y CG
Sbjct: 62 ARKAFQDISDPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGET 121
Query: 147 QDAWELFKAM---------------------------PMKSVVAS----------NSMIL 169
A LF M + SV S N+++
Sbjct: 122 APALGLFSGMREMGLDMDXFTLSAVITACCDDVGLIGQLHSVAVSSGFDSYVSVNNALLT 181
Query: 170 GLGQNGEVQKARVVFDQMRE-KDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFP 228
G+NG++ A+ VF M +D+ +W+ MI Y + + + LF M + G+ V+
Sbjct: 182 YYGKNGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMF 241
Query: 229 SLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKC-GELVKGKLIFDN 287
+L SVL+ L L G Q H QL++ F + +V S LI +Y KC G + + +F+
Sbjct: 242 TLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEE 301
Query: 288 FASKDIVMWNSIISGYAQY-GLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKE 346
D+V+WN+++SGY+Q E +L+ F +M G P+D + V V+SACS +
Sbjct: 302 ITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQ 361
Query: 347 GREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGAC 406
G++I + + ++ + + G ++DA +L + M E + + S++
Sbjct: 362 GKQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMA-EHNTVSLNSMIAGY 420
Query: 407 RTH 409
H
Sbjct: 421 AQH 423
>gi|224067848|ref|XP_002302563.1| predicted protein [Populus trichocarpa]
gi|222844289|gb|EEE81836.1| predicted protein [Populus trichocarpa]
Length = 514
Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust.
Identities = 216/509 (42%), Positives = 317/509 (62%), Gaps = 9/509 (1%)
Query: 100 ISWTTMISGYVNNNRIDVARKLFEVMPEKN----EVSWTAMLMGYTQCGRIQDAWE---- 151
+SW ++I G V + A F+ M ++ E + ++L + +Q+A
Sbjct: 7 VSWNSLILGCVREGFEEDALSFFQKMRSRDMKIDEYTLPSVLNSFASMKVMQNAISVHCL 66
Query: 152 LFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEV 211
+ K + +N++I + G++ A +VF +M +KD +W+ ++ Y G E
Sbjct: 67 IIKTGFEAYKLVNNALIDMYAKQGKLDCAIMVFSKMVDKDVVSWTSLVTGYSHNGSYEEA 126
Query: 212 IDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITM 271
I LF M+ GV + ++ SVLS CA L +D G+Q+HA LV+ + + V + L+TM
Sbjct: 127 IKLFCKMRISGVYPDQIAVASVLSACAELTVMDFGQQIHATLVKSGLESSLSVDNSLVTM 186
Query: 272 YIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTL 331
Y KCG +V FDN ++D++ W ++I GYAQ G G+ SL+ + +M ++G PD +T
Sbjct: 187 YAKCGSIVDANRAFDNMPTRDVISWTALIVGYAQNGRGKHSLQFYDQMIATGTKPDYITF 246
Query: 332 VGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMP 391
+G+L ACS+ G + GR FE+M Y ++P EHYACM+DLLGR+G++ +A L+ M
Sbjct: 247 IGLLFACSHNGLLGSGRAYFEAMDKVYGIKPGPEHYACMIDLLGRSGKLAEAKGLLNQMV 306
Query: 392 FEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAE 451
PDA++W +LL ACR H +L+L E+AAK L +LEP N+ PY++LSN+Y++ G++ D A
Sbjct: 307 VAPDAVVWKALLAACRVHKELELGEMAAKNLFELEPMNSMPYVMLSNMYSAAGKWEDAAR 366
Query: 452 LRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCP 511
+R+ MR R + K PG SWIE KV F D +HP I +++I L++EAGY P
Sbjct: 367 IRRLMRSRGICKEPGYSWIETNSKVSTFMSED-RNHPLRNEIYSKIDEIIMLIKEAGYVP 425
Query: 512 DSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLIS 571
D SF LHD D+E K L YHSEKLAVA+GL+ +P+G PIR+ KNLRVCGDCH+A+K S
Sbjct: 426 DMSFALHDTDDEVKELGLAYHSEKLAVAFGLLTVPQGAPIRIFKNLRVCGDCHTAMKYTS 485
Query: 572 KVMGREIILRDANRFHHFKDGLCSCRDYW 600
KV R IILRD+N FHHF +G CSC DYW
Sbjct: 486 KVYARHIILRDSNCFHHFTEGRCSCGDYW 514
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 116/217 (53%), Gaps = 2/217 (0%)
Query: 187 MREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHG 246
M D+ +W+ +I R+G+E + + F M+ ++++ +L SVL+ AS+ + +
Sbjct: 1 MEFDDEVSWNSLILGCVREGFEEDALSFFQKMRSRDMKIDEYTLPSVLNSFASMKVMQNA 60
Query: 247 RQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQY 306
VH +++ F+ V + LI MY K G+L ++F KD+V W S+++GY+
Sbjct: 61 ISVHCLIIKTGFEAYKLVNNALIDMYAKQGKLDCAIMVFSKMVDKDVVSWTSLVTGYSHN 120
Query: 307 GLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEH 366
G E+++K+F +M SGV PD + + VLSAC+ + G++I ++ K +E
Sbjct: 121 GSYEEAIKLFCKMRISGVYPDQIAVASVLSACAELTVMDFGQQIHATL-VKSGLESSLSV 179
Query: 367 YACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
+V + + G + DA + + MP D I W +L+
Sbjct: 180 DNSLVTMYAKCGSIVDANRAFDNMPTR-DVISWTALI 215
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 85/382 (22%), Positives = 166/382 (43%), Gaps = 45/382 (11%)
Query: 7 VSWTAMVRGYVEEGMITEAGTLFWQMPEKNV----VSWTVMLGGFIRDSRIDDARRLFDM 62
VSW +++ G V EG +A + F +M +++ + +L F + +A + +
Sbjct: 7 VSWNSLILGCVREGFEEDALSFFQKMRSRDMKIDEYTLPSVLNSFASMKVMQNAISVHCL 66
Query: 63 MPEKDVVA----QTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVA 118
+ + A ++ Y + G++D +F +M K+V+SWT++++GY +N + A
Sbjct: 67 IIKTGFEAYKLVNNALIDMYAKQGKLDCAIMVFSKMVDKDVVSWTSLVTGYSHNGSYEEA 126
Query: 119 RKLF------EVMPEKNEVSWT------AMLMGYTQCGRIQDAWELFKAMPMKSVVASNS 166
KLF V P++ V+ +M + Q Q L K+ S+ NS
Sbjct: 127 IKLFCKMRISGVYPDQIAVASVLSACAELTVMDFGQ----QIHATLVKSGLESSLSVDNS 182
Query: 167 MILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVN 226
++ + G + A FD M +D +W+ +I Y + G + + M G + +
Sbjct: 183 LVTMYAKCGSIVDANRAFDNMPTRDVISWTALIVGYAQNGRGKHSLQFYDQMIATGTKPD 242
Query: 227 FPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVA-------SVLITMYIKCGELV 279
+ + I +L C+ L GR + + VY + +I + + G+L
Sbjct: 243 YITFIGLLFACSHNGLLGSGRAYFEAMDK------VYGIKPGPEHYACMIDLLGRSGKLA 296
Query: 280 KGKLIFDNF-ASKDIVMWNSIISG---YAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVL 335
+ K + + + D V+W ++++ + + LGE + K E+ MP V L +
Sbjct: 297 EAKGLLNQMVVAPDAVVWKALLAACRVHKELELGEMAAKNLFELEPMNSMP-YVMLSNMY 355
Query: 336 SACSYTGKVKEGREIFESMKSK 357
SA GK ++ I M+S+
Sbjct: 356 SA---AGKWEDAARIRRLMRSR 374
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 101/217 (46%), Gaps = 18/217 (8%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV----VSWTVMLGGFIRDSRIDDA 56
M +++VVSWT++V GY G EA LF +M V ++ +L + +D
Sbjct: 102 MVDKDVVSWTSLVTGYSHNGSYEEAIKLFCKMRISGVYPDQIAVASVLSACAELTVMDFG 161
Query: 57 RRLFDMMP----EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+++ + E + ++V Y + G + + FD MP ++VISWT +I GY N
Sbjct: 162 QQIHATLVKSGLESSLSVDNSLVTMYAKCGSIVDANRAFDNMPTRDVISWTALIVGYAQN 221
Query: 113 NRIDVARKLFEVM----PEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASN--- 165
R + + ++ M + + +++ +L + G + F+AM +
Sbjct: 222 GRGKHSLQFYDQMIATGTKPDYITFIGLLFACSHNGLLGSGRAYFEAMDKVYGIKPGPEH 281
Query: 166 --SMILGLGQNGEVQKARVVFDQMREKDDA-TWSGMI 199
MI LG++G++ +A+ + +QM DA W ++
Sbjct: 282 YACMIDLLGRSGKLAEAKGLLNQMVVAPDAVVWKALL 318
>gi|357479991|ref|XP_003610281.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355511336|gb|AES92478.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 783
Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust.
Identities = 236/643 (36%), Positives = 357/643 (55%), Gaps = 48/643 (7%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMP 64
NV +A+V Y + + A +F MPE++ V W M+ G +++ DD+ +LF M
Sbjct: 142 NVFVGSALVDLYCKFSRVVYARKVFDGMPERDTVLWNTMINGLVKNCCFDDSIQLFREMV 201
Query: 65 EKDVVAQTNMV---------------------------LGYC------------QDGRVD 85
V ++ V G+C + G V+
Sbjct: 202 ADGVRVDSSTVTAVLPAAAELQELKVGMGIQCLALKIGFGFCDYVLTGLISLYSKCGDVN 261
Query: 86 EGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMG----YT 141
R +F + + ++I++ MISG+ N + + KLF + E ++ ++G ++
Sbjct: 262 TARLLFRRINRPDLIAYNAMISGFTANGGTECSVKLFRELLFSGERVSSSTIVGLIPLHS 321
Query: 142 QCGRIQDAWEL----FKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSG 197
G + A + K+ + + S + + E+ AR +FD+ EK W+
Sbjct: 322 PFGHLHLACSIHGFCVKSGIILNPTVSTAFTAIYNKLNEIDLARHLFDESPEKTVVAWNA 381
Query: 198 MIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQ 257
MI Y + G I LF M K N ++ ++LS CA L SL G+ VH +
Sbjct: 382 MISGYTQNGSTETAISLFKEMMKTEFTPNAVTITTILSACAQLGSLSFGKWVHHLIKSEN 441
Query: 258 FDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFH 317
+ ++YV++ L+ MY KCG + + +FD+ + K+ V WN++I GY +G G ++LK+++
Sbjct: 442 LEPNIYVSTALVDMYAKCGNISEAWQLFDSMSEKNTVTWNTMIFGYGLHGYGHEALKLYN 501
Query: 318 EMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRA 377
EM G P VT + VL ACS+ G V EG EIF +M +KY +EP EHYACMVD+LGR+
Sbjct: 502 EMLHLGYNPSAVTFLSVLYACSHAGLVGEGEEIFHNMVNKYRIEPLIEHYACMVDILGRS 561
Query: 378 GQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLS 437
GQ+E A++ I+ MP EP +WG+LLGAC H D+A +A+++L +L+P + G Y+LLS
Sbjct: 562 GQLEKALEFIKKMPVEPGPAVWGTLLGACMIHKDTDIARLASERLFELDPGSVGYYVLLS 621
Query: 438 NIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRML 497
NIY+ + F A +R+ ++KR + K PGC+ IEV H+F D SH I L
Sbjct: 622 NIYSVERNFPKAASIRQVVKKRKLAKSPGCTLIEVNGTPHVFVSGD-RSHSHATDIYAKL 680
Query: 498 EKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNL 557
EK+ G +RE GY ++ LHDV+EEEK ++ HSEKLA+A+GL+ G IR++KNL
Sbjct: 681 EKLTGKMREMGYQAETVPALHDVEEEEKELAVNVHSEKLAIAFGLITTEPGNEIRIIKNL 740
Query: 558 RVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
RVC DCH+A K ISK+ R I++RDANRFHHFKDG+CSC DYW
Sbjct: 741 RVCLDCHTATKFISKITERVIVVRDANRFHHFKDGICSCGDYW 783
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 103/431 (23%), Positives = 175/431 (40%), Gaps = 68/431 (15%)
Query: 86 EGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGR 145
R +F +PK ++ + ++ G+ N+ + L+ + +S +
Sbjct: 62 HARALFFSVPKPDIFLFNVLVRGFSLNDSPSSSISLYTHLRRNTNLSPDNFTYAFAVAAC 121
Query: 146 IQDAWELFKAMPMKSVVASNSMILGLGQN--------------GEVQKARVVFDQMREKD 191
D + ++ ++S+I G G N V AR VFD M E+D
Sbjct: 122 SNDKHLM--------LLHAHSIIDGYGSNVFVGSALVDLYCKFSRVVYARKVFDGMPERD 173
Query: 192 DATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHA 251
W+ MI + + I LF M +GVRV+ ++ +VL A L L G +
Sbjct: 174 TVLWNTMINGLVKNCCFDDSIQLFREMVADGVRVDSSTVTAVLPAAAELQELKVGMGIQC 233
Query: 252 QLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEK 311
++ F YV + LI++Y KCG++ +L+F D++ +N++ISG+ G E
Sbjct: 234 LALKIGFGFCDYVLTGLISLYSKCGDVNTARLLFRRINRPDLIAYNAMISGFTANGGTEC 293
Query: 312 SLKVFHEMFSSGVMPDDVTLVGVLS----------ACSYTGK-VKEG------------- 347
S+K+F E+ SG T+VG++ ACS G VK G
Sbjct: 294 SVKLFRELLFSGERVSSSTIVGLIPLHSPFGHLHLACSIHGFCVKSGIILNPTVSTAFTA 353
Query: 348 -----------REIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAM---PFE 393
R +F+ K +V + M+ + G E A+ L + M F
Sbjct: 354 IYNKLNEIDLARHLFDESPEKTVVA-----WNAMISGYTQNGSTETAISLFKEMMKTEFT 408
Query: 394 PDAIIWGSLLGACRTHMKLDLAEVAAK--KLLQLEPKNAGPYILLSNIYASQGRFHDVAE 451
P+A+ ++L AC L + K LEP N L ++YA G + +
Sbjct: 409 PNAVTITTILSACAQLGSLSFGKWVHHLIKSENLEP-NIYVSTALVDMYAKCGNISEAWQ 467
Query: 452 LRKNMRKRNVI 462
L +M ++N +
Sbjct: 468 LFDSMSEKNTV 478
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 102/216 (47%), Gaps = 18/216 (8%)
Query: 2 PERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEK----NVVSWTVMLGGFIRDSRIDDAR 57
PE+ VV+W AM+ GY + G A +LF +M + N V+ T +L + + +
Sbjct: 372 PEKTVVAWNAMISGYTQNGSTETAISLFKEMMKTEFTPNAVTITTILSACAQLGSLSFGK 431
Query: 58 RLFDMMP----EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNN 113
+ ++ E ++ T +V Y + G + E ++FD M +KN ++W TMI GY +
Sbjct: 432 WVHHLIKSENLEPNIYVSTALVDMYAKCGNISEAWQLFDSMSEKNTVTWNTMIFGYGLHG 491
Query: 114 RIDVARKLFEVMPE----KNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVAS----- 164
A KL+ M + V++ ++L + G + + E+F M K +
Sbjct: 492 YGHEALKLYNEMLHLGYNPSAVTFLSVLYACSHAGLVGEGEEIFHNMVNKYRIEPLIEHY 551
Query: 165 NSMILGLGQNGEVQKARVVFDQMR-EKDDATWSGMI 199
M+ LG++G+++KA +M E A W ++
Sbjct: 552 ACMVDILGRSGQLEKALEFIKKMPVEPGPAVWGTLL 587
>gi|225456890|ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
[Vitis vinifera]
Length = 698
Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust.
Identities = 232/618 (37%), Positives = 364/618 (58%), Gaps = 25/618 (4%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV----VSWTVMLGGFIRDSRIDDARR 58
E + ++ M+RG+ + EA LF +M E +V ++ +L R + + +
Sbjct: 86 EPDSPAYNIMIRGFTLKQSPHEAILLFKEMHENSVQPDEFTFPCILKVCSRLQALSEGEQ 145
Query: 59 LFDMMPE----KDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNR 114
+ ++ + + ++ Y G V+ R +FDEM ++NV +W +M +GY +
Sbjct: 146 IHALIMKCGFGSHGFVKNTLIHMYANCGEVEVARRVFDEMSERNVRTWNSMFAGYTKSGN 205
Query: 115 IDVARKLFEVMPEKN----EVSWTAMLMGYTQCGRIQD----AWELFKAMPMKSVVASNS 166
+ KLF M E + EV+ ++L T CGR+ D W + + + K + + +
Sbjct: 206 WEEVVKLFHEMLELDIRFDEVTLVSVL---TACGRLADLELGEW-INRYVEEKGLKGNPT 261
Query: 167 MILGL----GQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEG 222
+I L + G+V AR +FDQM +D WS MI Y + E +DLF MQK
Sbjct: 262 LITSLVDMYAKCGQVDTARRLFDQMDRRDVVAWSAMISGYSQASRCREALDLFHEMQKAN 321
Query: 223 VRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGK 282
+ N +++S+LS CA L +L+ G+ VH + + + + V + + L+ Y KCG +
Sbjct: 322 IDPNEITMVSILSSCAVLGALETGKWVHFFIKKKRMKLTVTLGTALMDFYAKCGSVESSI 381
Query: 283 LIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTG 342
+F K+++ W +I G A G G+K+L+ F+ M V P+DVT +GVLSACS+ G
Sbjct: 382 EVFGKMPVKNVLSWTVLIQGLASNGQGKKALEYFYLMLEKNVEPNDVTFIGVLSACSHAG 441
Query: 343 KVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSL 402
V EGR++F SM + +EP+ EHY CMVD+LGRAG +E+A + I+ MP +P+A+IW +L
Sbjct: 442 LVDEGRDLFVSMSRDFGIEPRIEHYGCMVDILGRAGLIEEAFQFIKNMPIQPNAVIWRTL 501
Query: 403 LGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVI 462
L +C+ H +++ E + K+L+ LEP ++G YILLSNIYAS GR+ D ++R M+++ +
Sbjct: 502 LASCKVHKNVEIGEESLKQLIILEPTHSGDYILLSNIYASVGRWEDALKVRGEMKEKGIK 561
Query: 463 KPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDE 522
K PGCS IE++ +H F D V H + I +E + ++ AGY P+++ D +E
Sbjct: 562 KTPGCSLIELDGVIHEFFAEDNV-HSQSEEIYNAIEDMMKQIKSAGYVPNTAEARLDAEE 620
Query: 523 EEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRD 582
++K S+ +HSEKLA+A+GL+K P G IR+ KNLRVC DCH+A KL+SKV REI++RD
Sbjct: 621 DDKESSVSHHSEKLAIAFGLIKSPPGTTIRITKNLRVCTDCHNATKLVSKVFNREIVVRD 680
Query: 583 ANRFHHFKDGLCSCRDYW 600
RFHHFK+G CSC DYW
Sbjct: 681 RTRFHHFKEGSCSCNDYW 698
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 85/287 (29%), Positives = 143/287 (49%), Gaps = 20/287 (6%)
Query: 142 QCGRIQDAWE----------LFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKD 191
QC I+D E L K ++++ S +++L + V +F Q+ E D
Sbjct: 33 QCKTIRDLNEIHAHLIKTRLLLKPKVAENLLESAAILLPTSMDYAVS----IFRQIDEPD 88
Query: 192 DATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHA 251
++ MI+ + K E I LF M + V+ + + +L VC+ L +L G Q+HA
Sbjct: 89 SPAYNIMIRGFTLKQSPHEAILLFKEMHENSVQPDEFTFPCILKVCSRLQALSEGEQIHA 148
Query: 252 QLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEK 311
+++C F +V + LI MY CGE+ + +FD + +++ WNS+ +GY + G E+
Sbjct: 149 LIMKCGFGSHGFVKNTLIHMYANCGEVEVARRVFDEMSERNVRTWNSMFAGYTKSGNWEE 208
Query: 312 SLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMV 371
+K+FHEM + D+VTLV VL+AC ++ G I ++ K L T +V
Sbjct: 209 VVKLFHEMLELDIRFDEVTLVSVLTACGRLADLELGEWINRYVEEKGLKGNPT-LITSLV 267
Query: 372 DLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLG----ACRTHMKLDL 414
D+ + GQV+ A +L + M D + W +++ A R LDL
Sbjct: 268 DMYAKCGQVDTARRLFDQMD-RRDVVAWSAMISGYSQASRCREALDL 313
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 98/403 (24%), Positives = 179/403 (44%), Gaps = 53/403 (13%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV----VSWTVMLGGFIRDSRIDDA 56
M ERNV +W +M GY + G E LF +M E ++ V+ +L R + ++
Sbjct: 185 MSERNVRTWNSMFAGYTKSGNWEEVVKLFHEMLELDIRFDEVTLVSVLTACGRLADLELG 244
Query: 57 RRLFDMMPEKDVVAQ----TNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+ + EK + T++V Y + G+VD R +FD+M +++V++W+ MISGY
Sbjct: 245 EWINRYVEEKGLKGNPTLITSLVDMYAKCGQVDTARRLFDQMDRRDVVAWSAMISGYSQA 304
Query: 113 NRIDVARKLFEVMP----EKNEVSWTAMLMGYTQCGRIQDA-WELF--KAMPMKSVVASN 165
+R A LF M + NE++ ++L G ++ W F K MK V
Sbjct: 305 SRCREALDLFHEMQKANIDPNEITMVSILSSCAVLGALETGKWVHFFIKKKRMKLTVTLG 364
Query: 166 SMILGL-GQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVR 224
+ ++ + G V+ + VF +M K+ +W+ +I+ G + ++ F LM ++ V
Sbjct: 365 TALMDFYAKCGSVESSIEVFGKMPVKNVLSWTVLIQGLASNGQGKKALEYFYLMLEKNVE 424
Query: 225 VNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLI 284
N + I VLS C+ +D GR + + R F ++
Sbjct: 425 PNDVTFIGVLSACSHAGLVDEGRDLFVSMSR-DFGIE----------------------- 460
Query: 285 FDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKV 344
I + ++ + GL E++ + M + P+ V +L++C V
Sbjct: 461 ------PRIEHYGCMVDILGRAGLIEEAFQFIKNM---PIQPNAVIWRTLLASCKVHKNV 511
Query: 345 KEGREIFESMKSKYLVEPK-TEHYACMVDLLGRAGQVEDAMKL 386
+ G ES+K ++EP + Y + ++ G+ EDA+K+
Sbjct: 512 EIGE---ESLKQLIILEPTHSGDYILLSNIYASVGRWEDALKV 551
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 76/174 (43%), Gaps = 13/174 (7%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV----VSWTVMLGGFIRDSRIDDA 56
MP +NV+SWT +++G G +A F+ M EKNV V++ +L +D+
Sbjct: 387 MPVKNVLSWTVLIQGLASNGQGKKALEYFYLMLEKNVEPNDVTFIGVLSACSHAGLVDEG 446
Query: 57 RRLF-----DMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMP-KKNVISWTTMISGYV 110
R LF D E + MV + G ++E + MP + N + W T+++
Sbjct: 447 RDLFVSMSRDFGIEPRIEHYGCMVDILGRAGLIEEAFQFIKNMPIQPNAVIWRTLLASCK 506
Query: 111 NNNRIDVAR---KLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSV 161
+ +++ K ++ + + + Y GR +DA ++ M K +
Sbjct: 507 VHKNVEIGEESLKQLIILEPTHSGDYILLSNIYASVGRWEDALKVRGEMKEKGI 560
>gi|147775281|emb|CAN61593.1| hypothetical protein VITISV_030555 [Vitis vinifera]
Length = 673
Score = 440 bits (1132), Expect = e-120, Method: Compositional matrix adjust.
Identities = 241/580 (41%), Positives = 360/580 (62%), Gaps = 23/580 (3%)
Query: 36 NVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTN-------MVLGYCQD-GRVDEG 87
NV W M+ I ++ A L+ M VVA + VL C D G V EG
Sbjct: 102 NVFLWNCMIKVCIENNEPFKAILLYYEM----VVAHSRPNKYTYPAVLKACSDSGVVAEG 157
Query: 88 REIFDEMPKKNVIS----WTTMISGYVNNNRIDVARKLFEVMP-EKNEVSWTAMLMGYTQ 142
++ + K + ++ I Y + R+ AR++ + E + V W AM+ GY +
Sbjct: 158 VQVHAHLVKHGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLR 217
Query: 143 CGRIQDAWELFKAMPMKSVVAS-NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKV 201
G ++ A ELF+ MP +S++++ N+MI G + G V+ AR FD+M+E+D+ +WS MI
Sbjct: 218 FGEVEAARELFEGMPDRSMISTWNAMISGFSRCGMVEVAREFFDEMKERDEISWSAMIDG 277
Query: 202 YERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVD 261
Y ++G +E +++F MQKE +R L SVLS CA+L +LD GR +H R +D
Sbjct: 278 YIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLD 337
Query: 262 VYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFS 321
+ + L+ MY KCG + +F+ ++K++ WN++I G A +G E ++ +F +M
Sbjct: 338 GVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKM-- 395
Query: 322 SGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVE 381
+ P+++T VGVL+AC++ G V++G IF SM+ +Y VEP+ EHY C+VDLLGRAG +
Sbjct: 396 -DIYPNEITFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLT 454
Query: 382 DAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYA 441
+A K++ ++P EP +WG+LLGACR H ++L E K LL+LEP+N+G Y LLSNIYA
Sbjct: 455 EAEKVVSSIPTEPTPAVWGALLGACRKHGNVELGERVGKILLELEPQNSGRYTLLSNIYA 514
Query: 442 SQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEK-KVHMFTGRDCVSHPEHPMIMRMLEKI 500
GR+ +V E+RK M++R + PG S I++ + +VH F D SHP+ I +ML+K+
Sbjct: 515 KAGRWEEVGEVRKLMKERGIKTTPGTSIIDLGRGEVHKFIIGDG-SHPQVKDIYQMLDKV 573
Query: 501 GGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVC 560
L+ GY PD S VL D+DEEEK ++ HSEKLA+ +GL+ G IR++KNLRVC
Sbjct: 574 KERLQMEGYEPDPSQVLFDIDEEEKETAVWQHSEKLAIGFGLINTSPGTTIRIVKNLRVC 633
Query: 561 GDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
DCHSA KLIS+V REII+RD R+HHF++G CSC+D+W
Sbjct: 634 EDCHSATKLISQVYNREIIVRDRIRYHHFRNGACSCKDFW 673
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 121/230 (52%), Gaps = 12/230 (5%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVS-WTVMLGGFIRDSRIDDARRLFD 61
E + V W AM+ GY+ G + A LF MP+++++S W M+ GF R ++ AR FD
Sbjct: 202 EVDAVCWNAMIDGYLRFGEVEAARELFEGMPDRSMISTWNAMISGFSRCGMVEVAREFFD 261
Query: 62 MMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNV----ISWTTMISGYVNNNRIDV 117
M E+D ++ + M+ GY Q+G E EIF +M K+ + +++S N +D
Sbjct: 262 EMKERDEISWSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQ 321
Query: 118 ARKLFEVMPEKNEVSW-----TAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLG 172
R + ++N + T+++ Y +CGRI AWE+F+ M K V + N+MI GL
Sbjct: 322 GRWI-HTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLA 380
Query: 173 QNGEVQKARVVFDQMR-EKDDATWSGMIKVYERKGYELEVIDLFTLMQKE 221
+G + A +F +M ++ T+ G++ G + + +F M+KE
Sbjct: 381 MHGRAEDAIDLFSKMDIYPNEITFVGVLNACAHGGLVQKGLTIFNSMRKE 430
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 107/201 (53%), Gaps = 12/201 (5%)
Query: 1 MPERNVVS-WTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRL 59
MP+R+++S W AM+ G+ GM+ A F +M E++ +SW+ M+ G+I++ +A +
Sbjct: 231 MPDRSMISTWNAMISGFSRCGMVEVAREFFDEMKERDEISWSAMIDGYIQEGCFMEALEI 290
Query: 60 FDMMPEKDVVAQTNM---VLGYCQD-GRVDEGREIFDEMPKKNVISW-----TTMISGYV 110
F M ++ + + + VL C + G +D+GR I K+N I T+++ Y
Sbjct: 291 FHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHT-YAKRNSIQLDGVLGTSLVDMYA 349
Query: 111 NNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPM-KSVVASNSMIL 169
RID+A ++FE M K SW AM+ G GR +DA +LF M + + + ++
Sbjct: 350 KCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKMDIYPNEITFVGVLN 409
Query: 170 GLGQNGEVQKARVVFDQMREK 190
G VQK +F+ MR++
Sbjct: 410 ACAHGGLVQKGLTIFNSMRKE 430
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 84/328 (25%), Positives = 146/328 (44%), Gaps = 26/328 (7%)
Query: 142 QCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKV 201
+ G +QD++ + + V++N + + + VFD +R+ + W+ MIKV
Sbjct: 60 RTGHLQDSYIAGSLVKSYANVSTNRYL-------SFESSLRVFDFVRKPNVFLWNCMIKV 112
Query: 202 YERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVD 261
+ I L+ M R N + +VL C+ + G QVHA LV+ D
Sbjct: 113 CIENNEPFKAILLYYEMVVAHSRPNKYTYPAVLKACSDSGVVAEGVQVHAHLVKHGLGGD 172
Query: 262 VYVASVLITMYIKCGELVKGKLIFDNFASK-DIVMWNSIISGYAQYGLGEKSLKVFHEMF 320
++ S I MY G LV+ + I D+ + D V WN++I GY ++G E + ++F M
Sbjct: 173 GHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRFGEVEAARELFEGMP 232
Query: 321 SSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQV 380
++ T ++S S G V+ RE F+ MK + + ++ M+D + G
Sbjct: 233 DRSMIS---TWNAMISGFSRCGMVEVAREFFDEMKERDEIS-----WSAMIDGYIQEGCF 284
Query: 381 EDAMKLIEAMPFE---PDAIIWGSLLGACRTHMKLD----LAEVAAKKLLQLEPKNAGPY 433
+A+++ M E P + S+L AC LD + A + +QL+
Sbjct: 285 MEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTS- 343
Query: 434 ILLSNIYASQGRFHDVAELRKNMRKRNV 461
L ++YA GR E+ + M + V
Sbjct: 344 --LVDMYAKCGRIDLAWEVFEKMSNKEV 369
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/277 (20%), Positives = 112/277 (40%), Gaps = 40/277 (14%)
Query: 221 EGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCG---- 276
E +++ +++ +L+ + SL H +Q HA ++R D Y+A L+ Y
Sbjct: 27 ETSKLSHKAILHLLNTQCT-TSLHHLKQAHALILRTGHLQDSYIAGSLVKSYANVSTNRY 85
Query: 277 -ELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVL 335
+FD ++ +WN +I + K++ +++EM + P+ T VL
Sbjct: 86 LSFESSLRVFDFVRKPNVFLWNCMIKVCIENNEPFKAILLYYEMVVAHSRPNKYTYPAVL 145
Query: 336 SACSYTGKVKEGREIFESM------KSKYLVEPKTEHYA--------------------- 368
ACS +G V EG ++ + +++ YA
Sbjct: 146 KACSDSGVVAEGVQVHAHLVKHGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDA 205
Query: 369 ----CMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQ 424
M+D R G+VE A +L E MP W +++ + + EVA + +
Sbjct: 206 VCWNAMIDGYLRFGEVEAARELFEGMPDRSMISTWNAMISGFS---RCGMVEVAREFFDE 262
Query: 425 LEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNV 461
++ ++ + + + Y +G F + E+ M+K +
Sbjct: 263 MKERDEISWSAMIDGYIQEGCFMEALEIFHQMQKEKI 299
>gi|224107977|ref|XP_002314675.1| predicted protein [Populus trichocarpa]
gi|222863715|gb|EEF00846.1| predicted protein [Populus trichocarpa]
Length = 845
Score = 440 bits (1131), Expect = e-120, Method: Compositional matrix adjust.
Identities = 241/650 (37%), Positives = 374/650 (57%), Gaps = 54/650 (8%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRD-SRIDDARR- 58
M ERNVVSWT+++ GY + G EA +LF++M E + +V + G I +++ D +
Sbjct: 200 MSERNVVSWTSLIGGYAKRGCYKEAVSLFFEMVEVGIRPNSVTMVGVISACAKLQDLQLG 259
Query: 59 ------LFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+ ++ E + + +V Y + G +D+ R+IFDE KN++ + T++S YV
Sbjct: 260 EQVCTCIGELELEVNALMVNALVDMYMKCGAIDKARKIFDECVDKNLVLYNTIMSNYV-- 317
Query: 113 NRIDVARKLFEVM----------------------PEKNEVS----------------W- 133
R +AR++ V+ E ++VS W
Sbjct: 318 -RQGLAREVLAVLGEMLKHGPRPDRITMLSAVSACSELDDVSCGKWCHGYVLRNGLEGWD 376
Query: 134 ---TAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREK 190
A++ Y +CG+ + A +F M K+ V+ NS+I G +NG+++ A +F M +
Sbjct: 377 NVCNAIINMYMKCGKQEMACRVFDRMLNKTRVSWNSLIAGFVRNGDMESAWKIFSAMPDS 436
Query: 191 DDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVH 250
D +W+ MI ++ E I+LF +MQ EG+ + +++ V S C L +LD + +H
Sbjct: 437 DLVSWNTMIGALVQESMFKEAIELFRVMQSEGITADKVTMVGVASACGYLGALDLAKWIH 496
Query: 251 AQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGE 310
+ + D+++ + L+ M+ +CG+ +F+ +D+ W + I A G G
Sbjct: 497 GYIKKKDIHFDMHLGTALVDMFARCGDPQSAMQVFNKMVKRDVSAWTAAIGAMAMEGNGT 556
Query: 311 KSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACM 370
++++F EM G+ PD V V +L+A S+ G V++G IF SMK Y + P+ HY CM
Sbjct: 557 GAIELFDEMLQQGIKPDGVVFVALLTALSHGGLVEQGWHIFRSMKDIYGIAPQAVHYGCM 616
Query: 371 VDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNA 430
VDLLGRAG + +A+ LI +M EP+ +IWGSLL ACR H +D+A AA+++ +L+P+
Sbjct: 617 VDLLGRAGLLSEALSLINSMQMEPNDVIWGSLLAACRVHKNVDIAAYAAERISELDPERT 676
Query: 431 GPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEH 490
G ++LLSNIYAS GR+ DVA++R +++++ K PG S IE+ K+ FT D SHPE
Sbjct: 677 GIHVLLSNIYASAGRWDDVAKVRLHLKEKGAHKMPGSSSIEINGKIFEFTTGD-ESHPEM 735
Query: 491 PMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVP 550
I ML++I LR+ GY PD + VL DV+E+EK + L HSEKLA+A+ L+ +G+P
Sbjct: 736 THIEPMLKEICCRLRDIGYVPDLTNVLLDVNEKEKEYLLSRHSEKLAIAFALISTGQGMP 795
Query: 551 IRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
IRV KNLR+C DCHS KL+SK REII+RD NRFH F+ G CSC DYW
Sbjct: 796 IRVAKNLRICSDCHSFAKLVSKSYSREIIVRDNNRFHFFQQGFCSCGDYW 845
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 109/447 (24%), Positives = 208/447 (46%), Gaps = 55/447 (12%)
Query: 9 WTAMVRGYVEEGMITEAGTLFWQMPEKNVV----SWTVMLGGFIRDSRIDDARR----LF 60
+++++RG+ G+ +A +F Q+ V ++ +L + + + + + +
Sbjct: 107 FSSLIRGFSACGLGYKAIVVFRQLMCMGAVPDNFTFPFVLSACTKSAALTEGFQVHGAIV 166
Query: 61 DMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARK 120
M E+D+ + +++ Y + G +D R +FD+M ++NV+SWT++I GY A
Sbjct: 167 KMGFERDMFVENSLIHFYGECGEIDCMRRVFDKMSERNVVSWTSLIGGYAKRGCYKEAVS 226
Query: 121 LF----EVMPEKNEVSWTAMLMGYTQCGRIQD------AWELFKAMPMK-SVVASNSMIL 169
LF EV N V+ ++ + C ++QD + ++ + + N+++
Sbjct: 227 LFFEMVEVGIRPNSVTMVGVI---SACAKLQDLQLGEQVCTCIGELELEVNALMVNALVD 283
Query: 170 GLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPS 229
+ G + KAR +FD+ +K+ ++ ++ Y R+G EV+ + M K G R + +
Sbjct: 284 MYMKCGAIDKARKIFDECVDKNLVLYNTIMSNYVRQGLAREVLAVLGEMLKHGPRPDRIT 343
Query: 230 LISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFA 289
++S +S C+ L + G+ H ++R + V + +I MY+KCG+ +FD
Sbjct: 344 MLSAVSACSELDDVSCGKWCHGYVLRNGLEGWDNVCNAIINMYMKCGKQEMACRVFDRML 403
Query: 290 SKDIVMWNSIISGYAQYGLGEKSLKVFH---------------------------EMF-- 320
+K V WNS+I+G+ + G E + K+F E+F
Sbjct: 404 NKTRVSWNSLIAGFVRNGDMESAWKIFSAMPDSDLVSWNTMIGALVQESMFKEAIELFRV 463
Query: 321 --SSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAG 378
S G+ D VT+VGV SAC Y G + + I +K K + +VD+ R G
Sbjct: 464 MQSEGITADKVTMVGVASACGYLGALDLAKWIHGYIKKKD-IHFDMHLGTALVDMFARCG 522
Query: 379 QVEDAMKLIEAMPFEPDAIIWGSLLGA 405
+ AM++ M + D W + +GA
Sbjct: 523 DPQSAMQVFNKM-VKRDVSAWTAAIGA 548
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 86/182 (47%), Gaps = 23/182 (12%)
Query: 237 CASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCG-----ELVKGKL---IFDNF 288
C ++ L +Q+H+Q+ + + + LI+ + G E + L I DN
Sbjct: 43 CKTMTEL---KQLHSQITKNGLNHHPLSLTNLISSCTEMGTFESLEYAQKALELFIEDNG 99
Query: 289 ASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGR 348
M++S+I G++ GLG K++ VF ++ G +PD+ T VLSAC+ + + EG
Sbjct: 100 IMGTHYMFSSLIRGFSACGLGYKAIVVFRQLMCMGAVPDNFTFPFVLSACTKSAALTEGF 159
Query: 349 EIFESM-----KSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
++ ++ + VE H+ G G+++ ++ + M E + + W SL+
Sbjct: 160 QVHGAIVKMGFERDMFVENSLIHF------YGECGEIDCMRRVFDKMS-ERNVVSWTSLI 212
Query: 404 GA 405
G
Sbjct: 213 GG 214
>gi|347954540|gb|AEP33770.1| organelle transcript processing 82, partial [Raphanus sativus]
Length = 675
Score = 440 bits (1131), Expect = e-120, Method: Compositional matrix adjust.
Identities = 239/653 (36%), Positives = 373/653 (57%), Gaps = 54/653 (8%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPE----KNVVSWTVMLGGFIRDSRIDDA 56
+ E N++ W M+RG+ A ++ +M N S+ +L + ++
Sbjct: 24 IQEPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHLPNSYSFPFLLKSCAKSKAFEEG 83
Query: 57 RRLFDMMPEK----DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
R++ + + D T+++ Y ++G +++ R++FD ++V+S T +I+GY +
Sbjct: 84 RQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRDVVSCTALITGYASR 143
Query: 113 NRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAM----------PMKSVV 162
ARK+F+ + E++ VSW AM+ GY + GR ++A ELFK M + SVV
Sbjct: 144 GDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRTNVRPDEGTLVSVV 203
Query: 163 AS---------------------------------NSMILGLGQNGEVQKARVVFDQMRE 189
++ N++I + G+V+ A +F+ +
Sbjct: 204 SACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGDVETAFGLFEGLSC 263
Query: 190 KDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQV 249
KD +W+ +I Y E + LF M + G N +L+SVL CA L ++D GR +
Sbjct: 264 KDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLSVLPACAHLGAIDIGRWI 323
Query: 250 HAQLVRCQFDV--DVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYG 307
H + + V + + + LI MY KCG++ +F++ + + WN++I G+A +G
Sbjct: 324 HVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLYRSLSSWNAMIFGFAMHG 383
Query: 308 LGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHY 367
+ +F M + V PDD+T VG+LSACS++G + GR+IF+SM Y + PK EHY
Sbjct: 384 RANAAFDLFSRMRGNRVEPDDITFVGLLSACSHSGLLDLGRQIFKSMTQDYNLTPKLEHY 443
Query: 368 ACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEP 427
CM+DLLG +G ++A ++I MP EPD +IW SLL AC+ H L+LAE A+KL+++EP
Sbjct: 444 GCMIDLLGHSGLFKEAEEMIHTMPMEPDGVIWCSLLKACKKHGNLELAESFAQKLIKIEP 503
Query: 428 KNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSH 487
+N+G Y+LLSNIYA+ GR+ DVA +R + + + K PGCS IEV+ VH F D + H
Sbjct: 504 ENSGSYVLLSNIYATAGRWEDVARVRGVLNGKGMKKVPGCSSIEVDSVVHEFIIGDKL-H 562
Query: 488 PEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPE 547
P I MLE++ L EAG+ PD+S VL +++EE K +LR+HSEKLA+A+GL+
Sbjct: 563 PRRREIYHMLEEMDVQLEEAGFAPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKP 622
Query: 548 GVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
G + ++KNLRVC +CH A KLISK+ REI+ RD RFHHF+DG+CSC DYW
Sbjct: 623 GTKLTIVKNLRVCRNCHEATKLISKIYKREIVARDRTRFHHFRDGVCSCCDYW 675
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 127/264 (48%), Gaps = 36/264 (13%)
Query: 183 VFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLAS 242
VF+ ++E + W+ M++ + + ++++ M G N S +L CA +
Sbjct: 20 VFETIQEPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHLPNSYSFPFLLKSCAKSKA 79
Query: 243 LDHGRQVHAQLVRCQFDVDVYVASVLITMY---------------------IKCGELVKG 281
+ GRQ+HAQ+++ +D YV + LI+MY + C L+ G
Sbjct: 80 FEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRDVVSCTALITG 139
Query: 282 ----------KLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTL 331
+ +FD +D+V WN++I+GY + G E++L++F EM + V PD+ TL
Sbjct: 140 YASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRTNVRPDEGTL 199
Query: 332 VGVLSACSYTGKVKEGREIFE---SMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIE 388
V V+SAC+ +G ++ GR++ + + ++DL + G VE A L E
Sbjct: 200 VSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGDVETAFGLFE 259
Query: 389 AMPFEPDAIIWGSLLGACRTHMKL 412
+ + D + W +L+G TH L
Sbjct: 260 GLSCK-DVVSWNTLIGG-YTHTNL 281
>gi|308080264|ref|NP_001183681.1| uncharacterized protein LOC100502275 [Zea mays]
gi|238013832|gb|ACR37951.1| unknown [Zea mays]
gi|413938826|gb|AFW73377.1| hypothetical protein ZEAMMB73_579690 [Zea mays]
Length = 745
Score = 440 bits (1131), Expect = e-120, Method: Compositional matrix adjust.
Identities = 235/679 (34%), Positives = 378/679 (55%), Gaps = 81/679 (11%)
Query: 2 PERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGF-------------- 47
P N+ ++ A++ ++ + +LF M +++ VS+ ++ GF
Sbjct: 68 PHPNLFTYNALLSTLAHARLLDDMDSLFASMAQRDTVSYNAVIAGFSGGGAHARAVRLYH 127
Query: 48 --------IRDSRID------DARRLFDMMPEKDVVAQ-------TNMVLG------YCQ 80
+R SRI A L D + Q N +G Y +
Sbjct: 128 TLLRAGSSVRPSRITMSAMVMAASALGDRALGRQFHCQILRLGFGVNAFVGSPLVGMYAK 187
Query: 81 DGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGY 140
G + + + +FDEM KNV+ + TMI+G + ++ AR+LFEVM +++ ++WT M+ G+
Sbjct: 188 MGLIGDAKRVFDEMDGKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDCITWTTMVTGF 247
Query: 141 TQCGRIQDAWELFKAMPMK----------SVVASNSMILGLGQNGEV------------- 177
TQ G A F+ M + S++ + + L Q ++
Sbjct: 248 TQNGLESQALNFFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTHYDDNV 307
Query: 178 ----------------QKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKE 221
+ A F +M K+ +W+ +I Y + G E + +F+ MQ++
Sbjct: 308 FVGSALVDMYSKCRSIKPAETAFRRMSCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRD 367
Query: 222 GVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKG 281
G+ + +L SV+S CA+LASL+ G Q H + + V++ L+T+Y KCG +
Sbjct: 368 GIDPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDA 427
Query: 282 KLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYT 341
+FD D V W ++++GYAQ+G ++++ +F +M + V PD VT +GVLSACS
Sbjct: 428 HRLFDEMLFHDQVSWTALVTGYAQFGRAKETIDLFEKMLAKDVKPDGVTFIGVLSACSRA 487
Query: 342 GKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGS 401
G V++G F SM+ + + P +HY CM+DL R+G++++A + I+ MP PDAI WG+
Sbjct: 488 GFVEKGCSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGRLKEAEEFIKQMPMHPDAIGWGT 547
Query: 402 LLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNV 461
LL ACR +++ + AA+ LL+++P+N Y+LL +++A++G ++ VA+LR+ MR R V
Sbjct: 548 LLSACRLRGDMEIGQWAAENLLEIDPQNPASYVLLCSMHATKGNWNQVAQLRRGMRDRQV 607
Query: 462 IKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVD 521
K PGCSWI+ + KVH+F+ D SHP I LE + + E GY PD S VLHDV
Sbjct: 608 KKEPGCSWIKYKNKVHIFSADD-QSHPFSKGIYEKLEWLNSKMLEEGYKPDVSSVLHDVA 666
Query: 522 EEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILR 581
+ +KVH + +HSEKLA+A+GL+ +P +PIR++KNLRVC DCH+A KLISK+ GR+I++R
Sbjct: 667 DTDKVHMVSHHSEKLAIAFGLMFVPHEMPIRIVKNLRVCVDCHNATKLISKITGRDILVR 726
Query: 582 DANRFHHFKDGLCSCRDYW 600
DA RFH F +G+CSC D+W
Sbjct: 727 DAVRFHKFSNGVCSCGDFW 745
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/353 (22%), Positives = 146/353 (41%), Gaps = 53/353 (15%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
M +NVV + M+ G + M+ EA LF M +++ ++WT M+ GF ++ A F
Sbjct: 201 MDGKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDCITWTTMVTGFTQNGLESQALNFF 260
Query: 61 DMMPEKDVVAQT---NMVLGYCQD-GRVDEGREIFDEMPKK----NVISWTTMISGYVNN 112
M + + +L C +++G++I + + NV + ++ Y
Sbjct: 261 RRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTHYDDNVFVGSALVDMYSKC 320
Query: 113 NRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMP--------------- 157
I A F M KN +SWTA+++GY Q G ++A +F M
Sbjct: 321 RSIKPAETAFRRMSCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDFTLGSVI 380
Query: 158 ------------------------MKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDA 193
M + SN+++ G+ G ++ A +FD+M D
Sbjct: 381 SSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMLFHDQV 440
Query: 194 TWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQL 253
+W+ ++ Y + G E IDLF M + V+ + + I VLS C+ ++ G +
Sbjct: 441 SWTALVTGYAQFGRAKETIDLFEKMLAKDVKPDGVTFIGVLSACSRAGFVEKGCSYFHSM 500
Query: 254 VRCQFDV---DVYVASVLITMYIKCGELVKGKLIFDNFA-SKDIVMWNSIISG 302
+ V D Y + +I +Y + G L + + D + W +++S
Sbjct: 501 QKDHGIVPIDDHY--TCMIDLYSRSGRLKEAEEFIKQMPMHPDAIGWGTLLSA 551
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 86/392 (21%), Positives = 155/392 (39%), Gaps = 75/392 (19%)
Query: 136 MLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATW 195
+L Y + GR A +F A P ++ N+++ L + +F M ++D ++
Sbjct: 47 LLTAYGKAGRHARARRVFDATPHPNLFTYNALLSTLAHARLLDDMDSLFASMAQRDTVSY 106
Query: 196 SGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDH---GRQVHAQ 252
+ +I + G + L+ + + G V PS I++ ++ + ++L GRQ H Q
Sbjct: 107 NAVIAGFSGGGAHARAVRLYHTLLRAGSSVR-PSRITMSAMVMAASALGDRALGRQFHCQ 165
Query: 253 LVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVM----------------- 295
++R F V+ +V S L+ MY K G + K +FD K++VM
Sbjct: 166 ILRLGFGVNAFVGSPLVGMYAKMGLIGDAKRVFDEMDGKNVVMYNTMITGLLRCKMVEEA 225
Query: 296 --------------WNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYT 341
W ++++G+ Q GL ++L F M G+ D T +L+AC
Sbjct: 226 RRLFEVMTDRDCITWTTMVTGFTQNGLESQALNFFRRMRFQGIAIDQYTFGSILTACGAL 285
Query: 342 GKVKEGREI----------------------FESMKSKYLVEPKTEHYAC--------MV 371
+++G++I + +S E +C ++
Sbjct: 286 SALEQGKQIHAYIIRTHYDDNVFVGSALVDMYSKCRSIKPAETAFRRMSCKNIISWTALI 345
Query: 372 DLLGRAGQVEDAMKLIEAMP---FEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPK 428
G+ G E+A+++ M +PD GS++ +C L+ E A L L
Sbjct: 346 VGYGQNGCSEEAVRVFSEMQRDGIDPDDFTLGSVISSCANLASLE--EGAQFHCLAL-VS 402
Query: 429 NAGPYILLSN----IYASQGRFHDVAELRKNM 456
YI +SN +Y G D L M
Sbjct: 403 GLMHYITVSNALVTLYGKCGSIEDAHRLFDEM 434
>gi|356577722|ref|XP_003556972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Glycine max]
Length = 820
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 239/625 (38%), Positives = 371/625 (59%), Gaps = 37/625 (5%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM------PEKNVVSWTVMLGGFIRDSRID 54
M +N+V+WT M+ Y + G++ +A LF ++ P+K + T +L +
Sbjct: 208 MQHKNLVTWTLMITRYSQLGLLDDAVDLFCRLLVSEYTPDK--FTLTSLLSACVELEFFS 265
Query: 55 DARRLFDMMPEK----DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYV 110
++L + DV +V Y + V+ R+IF+ M NV+SWT +ISGYV
Sbjct: 266 LGKQLHSWVIRSGLASDVFVGCTLVDMYAKSAAVENSRKIFNTMLHHNVMSWTALISGYV 325
Query: 111 NNNRIDVARKLF------EVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSV--- 161
+ + A KLF V P N +++++L C + D + + K + +++
Sbjct: 326 QSRQEQEAIKLFCNMLHGHVTP--NCFTFSSVLKA---CASLPD-FGIGKQLHGQTIKLG 379
Query: 162 -----VASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFT 216
NS+I ++G ++ AR F+ + EK+ +++ + L+ + F
Sbjct: 380 LSTINCVGNSLINMYARSGTMECARKAFNILFEKNLISYN---TAADANAKALDSDESFN 436
Query: 217 L-MQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKC 275
++ GV + + +LS A + ++ G Q+HA +V+ F ++ + + LI+MY KC
Sbjct: 437 HEVEHTGVGASPFTYACLLSGAACIGTIVKGEQIHALIVKSGFGTNLCINNALISMYSKC 496
Query: 276 GELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVL 335
G +F++ ++++ W SIISG+A++G K+L++F+EM GV P++VT + VL
Sbjct: 497 GNKEAALQVFNDMGYRNVITWTSIISGFAKHGFATKALELFYEMLEIGVKPNEVTYIAVL 556
Query: 336 SACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPD 395
SACS+ G + E + F SM + + P+ EHYACMVDLLGR+G + +A++ I +MPF+ D
Sbjct: 557 SACSHVGLIDEAWKHFNSMHYNHSISPRMEHYACMVDLLGRSGLLLEAIEFINSMPFDAD 616
Query: 396 AIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKN 455
A++W + LG+CR H L E AAKK+L+ EP + YILLSN+YAS+GR+ DVA LRK+
Sbjct: 617 ALVWRTFLGSCRVHRNTKLGEHAAKKILEREPHDPATYILLSNLYASEGRWDDVAALRKS 676
Query: 456 MRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSF 515
M+++ +IK G SWIEV+ +VH F D SHP+ I L+++ ++ GY P++ F
Sbjct: 677 MKQKKLIKETGYSWIEVDNQVHKFHVGD-TSHPQARKIYDELDELALKIKNLGYIPNTDF 735
Query: 516 VLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMG 575
VLHDV++E+K L HSEK+AVAY L+ P+ PIRV KNLRVCGDCH+AIK IS V G
Sbjct: 736 VLHDVEDEQKEQYLFQHSEKIAVAYALISTPKPKPIRVFKNLRVCGDCHTAIKYISIVTG 795
Query: 576 REIILRDANRFHHFKDGLCSCRDYW 600
REI++RDANRFHH KDG CSC DYW
Sbjct: 796 REIVVRDANRFHHIKDGKCSCNDYW 820
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 97/389 (24%), Positives = 176/389 (45%), Gaps = 31/389 (7%)
Query: 37 VVSWTVMLGGFIRDSRIDDAR----RLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFD 92
++ +++L IR ++ + +L D D V +++ Y + G + IF
Sbjct: 39 LIKSSLLLKACIRSGNLELGKLLHHKLIDSGLPLDSVLLNSLITLYSKCGDWENALSIFR 98
Query: 93 EM--PKKNVISWTTMISGYVNNNRIDVARKLFEVMPE-------KNEVSWTAMLMGYTQC 143
M K++++SW+ +IS + NN+ A F M + NE +TA+L +
Sbjct: 99 NMGHHKRDLVSWSAIISCFANNSMESRALLTFLHMLQCSRNIIYPNEYCFTALLRSCSNP 158
Query: 144 GRIQDAWELF----KAMPMKSVVASNSMILGLGQNG--EVQKARVVFDQMREKDDATWSG 197
+F K S V ++ + G ++Q AR+VFD+M+ K+ TW+
Sbjct: 159 LFFTTGLAIFAFLLKTGYFDSHVCVGCALIDMFTKGGLDIQSARMVFDKMQHKNLVTWTL 218
Query: 198 MIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQ 257
MI Y + G + +DLF + + +L S+LS C L G+Q+H+ ++R
Sbjct: 219 MITRYSQLGLLDDAVDLFCRLLVSEYTPDKFTLTSLLSACVELEFFSLGKQLHSWVIRSG 278
Query: 258 FDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFH 317
DV+V L+ MY K + + IF+ +++ W ++ISGY Q ++++K+F
Sbjct: 279 LASDVFVGCTLVDMYAKSAAVENSRKIFNTMLHHNVMSWTALISGYVQSRQEQEAIKLFC 338
Query: 318 EMFSSGVMPDDVTLVGVLSACSY-----TGKVKEGREIFESMKSKYLVEPKTEHYACMVD 372
M V P+ T VL AC+ GK G+ I + + V +++
Sbjct: 339 NMLHGHVTPNCFTFSSVLKACASLPDFGIGKQLHGQTIKLGLSTINCVGNS------LIN 392
Query: 373 LLGRAGQVEDAMKLIEAMPFEPDAIIWGS 401
+ R+G +E A K + FE + I + +
Sbjct: 393 MYARSGTMECARKAFNIL-FEKNLISYNT 420
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 95/432 (21%), Positives = 187/432 (43%), Gaps = 33/432 (7%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPE--KNVV-----SWTVMLGGFIRDSRIDD 55
+R++VSW+A++ + M + A F M + +N++ +T +L
Sbjct: 104 KRDLVSWSAIISCFANNSMESRALLTFLHMLQCSRNIIYPNEYCFTALLRSCSNPLFFTT 163
Query: 56 ARRLFDMMP-----EKDVVAQTNMVLGYCQDG-RVDEGREIFDEMPKKNVISWTTMISGY 109
+F + + V ++ + + G + R +FD+M KN+++WT MI+ Y
Sbjct: 164 GLAIFAFLLKTGYFDSHVCVGCALIDMFTKGGLDIQSARMVFDKMQHKNLVTWTLMITRY 223
Query: 110 VNNNRIDVARKLF------EVMPEKNEVSWTAML-----MGYTQCGRIQDAWELFKAMPM 158
+D A LF E P+K + T++L + + G+ +W + +
Sbjct: 224 SQLGLLDDAVDLFCRLLVSEYTPDK--FTLTSLLSACVELEFFSLGKQLHSWVIRSGLA- 280
Query: 159 KSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLM 218
V +++ ++ V+ +R +F+ M + +W+ +I Y + E E I LF M
Sbjct: 281 SDVFVGCTLVDMYAKSAAVENSRKIFNTMLHHNVMSWTALISGYVQSRQEQEAIKLFCNM 340
Query: 219 QKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGEL 278
V N + SVL CASL G+Q+H Q ++ V + LI MY + G +
Sbjct: 341 LHGHVTPNCFTFSSVLKACASLPDFGIGKQLHGQTIKLGLSTINCVGNSLINMYARSGTM 400
Query: 279 VKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSAC 338
+ F+ K+++ +N+ A+ ++S HE+ +GV T +LS
Sbjct: 401 ECARKAFNILFEKNLISYNTAADANAKALDSDESFN--HEVEHTGVGASPFTYACLLSGA 458
Query: 339 SYTGKVKEGREIFESM-KSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAI 397
+ G + +G +I + KS + + ++ + + G E A+++ M + + I
Sbjct: 459 ACIGTIVKGEQIHALIVKSGFGTNLCINN--ALISMYSKCGNKEAALQVFNDMGYR-NVI 515
Query: 398 IWGSLLGACRTH 409
W S++ H
Sbjct: 516 TWTSIISGFAKH 527
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 126/279 (45%), Gaps = 20/279 (7%)
Query: 139 GYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQM--REKDDATWS 196
G + G++ + +P+ SV+ NS+I + G+ + A +F M ++D +WS
Sbjct: 53 GNLELGKLLHHKLIDSGLPLDSVLL-NSLITLYSKCGDWENALSIFRNMGHHKRDLVSWS 111
Query: 197 GMIKVYERKGYELEVIDLFTLMQKEGVRVNFPS---LISVLSVCASLASLDHGRQVHAQL 253
+I + E + F M + + +P+ ++L C++ G + A L
Sbjct: 112 AIISCFANNSMESRALLTFLHMLQCSRNIIYPNEYCFTALLRSCSNPLFFTTGLAIFAFL 171
Query: 254 VRC-QFDVDVYVASVLITMYIKCG-ELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEK 311
++ FD V V LI M+ K G ++ +++FD K++V W +I+ Y+Q GL +
Sbjct: 172 LKTGYFDSHVCVGCALIDMFTKGGLDIQSARMVFDKMQHKNLVTWTLMITRYSQLGLLDD 231
Query: 312 SLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGRE-----IFESMKSKYLVEPKTEH 366
++ +F + S PD TL +LSAC G++ I + S V
Sbjct: 232 AVDLFCRLLVSEYTPDKFTLTSLLSACVELEFFSLGKQLHSWVIRSGLASDVFVG----- 286
Query: 367 YACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
+VD+ ++ VE++ K+ M + + W +L+
Sbjct: 287 -CTLVDMYAKSAAVENSRKIFNTM-LHHNVMSWTALISG 323
>gi|359497290|ref|XP_002268807.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Vitis vinifera]
Length = 719
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 252/656 (38%), Positives = 367/656 (55%), Gaps = 61/656 (9%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
+ + NV S+ A++ Y +E A LF Q+PE ++VS+ ++ + A LF
Sbjct: 69 ISDPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLF 128
Query: 61 DMMPEK----DVVAQTNMVLGYCQD-GRVDEGREI-----FDEMPKKNVISWTTMISGYV 110
M E D + ++ C D G + + + FD N +++ Y
Sbjct: 129 SGMREMGLDMDGFTLSAVITACCDDVGLIGQLHSVAVSSGFDSYVSVN----NALLTYYG 184
Query: 111 NNNRIDVARKLFEVMPE-KNEVSWTAMLMGYTQCGRIQDAWELFKAM----------PMK 159
N +D A+++F M ++EVSW +M++ Y Q A LF+ M +
Sbjct: 185 KNGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLA 244
Query: 160 SVVASNSMI---------------LGLGQN---------------GEVQKARVVFDQMRE 189
SV+ + + + G QN G + R VF+++ E
Sbjct: 245 SVLTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITE 304
Query: 190 KDDATWSGMIKVYERKGYELE-VIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQ 248
D W+ M+ Y + LE ++ F MQ G R N S + V+S C++L+S G+Q
Sbjct: 305 PDLVLWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQ 364
Query: 249 VHAQLVRCQFDVD-VYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYG 307
+H+ ++ + + V + LI MY KCG L + +FD A + V NS+I+GYAQ+G
Sbjct: 365 IHSLALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHG 424
Query: 308 LGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHY 367
+ +SL +F M + P +T + VLSAC++TG+V+EG F MK K+ +EP+ EHY
Sbjct: 425 IEMESLHLFQWMLERQIAPTSITFISVLSACAHTGRVEEGWNYFNMMKEKFNIEPEAEHY 484
Query: 368 ACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEP 427
+CM+DLLGRAG++ +A LI MPF P +I W SLLGACRTH ++LA AA ++LQLEP
Sbjct: 485 SCMIDLLGRAGKLSEAENLIARMPFNPGSIGWASLLGACRTHGNIELAVKAANQVLQLEP 544
Query: 428 KNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSH 487
NA PY++LSN+YAS GR+ +VA +RK MR R V K PGCSWIEV+K++H+F D SH
Sbjct: 545 SNAAPYVVLSNMYASAGRWEEVATVRKFMRDRGVKKKPGCSWIEVKKRIHVFVAEDS-SH 603
Query: 488 PEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEE---EKVHSLRYHSEKLAVAYGLVK 544
P I LE++ G ++ AGY PD + L D EK L +HSEKLAVA+GL+
Sbjct: 604 PMIKEIYEFLEEMSGKMKRAGYVPDVRWALVKDDGTRGGEKEIRLGHHSEKLAVAFGLIS 663
Query: 545 LPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
+G P+ V+KNLR+CGDCH+AIK IS + GREI +RDA+RFH FK+G CSC DYW
Sbjct: 664 TKDGEPVLVVKNLRICGDCHNAIKFISAIAGREITVRDAHRFHCFKEGQCSCGDYW 719
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 107/423 (25%), Positives = 193/423 (45%), Gaps = 50/423 (11%)
Query: 36 NVVSWTV-----MLGGFIRDSRIDDARRLFDMMPEKDVVAQT----NMVLGYCQDGRVDE 86
N +SWT+ +L I + + + L + + + T + +L Y + GR+
Sbjct: 2 NQISWTLQRFRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAW 61
Query: 87 GREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRI 146
R+ F ++ NV S+ +I+ Y +R +A +LF+ +PE + VS+ ++ Y CG
Sbjct: 62 ARKAFQDISDPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGET 121
Query: 147 QDAWELFKAM---------------------------PMKSVVAS----------NSMIL 169
A LF M + SV S N+++
Sbjct: 122 APALGLFSGMREMGLDMDGFTLSAVITACCDDVGLIGQLHSVAVSSGFDSYVSVNNALLT 181
Query: 170 GLGQNGEVQKARVVFDQMRE-KDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFP 228
G+NG++ A+ VF M +D+ +W+ MI Y + + + LF M + G+ V+
Sbjct: 182 YYGKNGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMF 241
Query: 229 SLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKC-GELVKGKLIFDN 287
+L SVL+ L L G Q H QL++ F + +V S LI +Y KC G + + +F+
Sbjct: 242 TLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEE 301
Query: 288 FASKDIVMWNSIISGYAQY-GLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKE 346
D+V+WN+++SGY+Q E +L+ F +M G P+D + V V+SACS +
Sbjct: 302 ITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQ 361
Query: 347 GREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGAC 406
G++I + + ++ + + G ++DA +L + M E + + S++
Sbjct: 362 GKQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMA-EHNTVSLNSMIAGY 420
Query: 407 RTH 409
H
Sbjct: 421 AQH 423
>gi|357111956|ref|XP_003557776.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Brachypodium distachyon]
Length = 747
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 229/646 (35%), Positives = 369/646 (57%), Gaps = 50/646 (7%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMP 64
+V + ++V Y+ G I+EA +F +M E++V +W ML G R++R +A LF M
Sbjct: 102 SVFTSGSLVHAYLRFGRISEAYKVFDEMSERDVPAWNAMLSGLCRNARAAEAVGLFGRMV 161
Query: 65 EKDVVAQTNMV---------LG------------------------------YCQDGRVD 85
+ V T V LG Y + G ++
Sbjct: 162 GEGVAGDTVTVSSVLPMCVLLGDQVLALVMHVYAVKHGLDKELFVCNALIDVYGKLGMLE 221
Query: 86 EGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMP----EKNEVSWTAMLMGYT 141
E + +F M +++++W ++ISG + A K+F+ M + ++ ++
Sbjct: 222 EAQCVFHGMECRDLVTWNSIISGCEQRGQTAAALKMFQGMRGSGVSPDVLTLVSLASAIA 281
Query: 142 QCGRIQDAWELF-----KAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWS 196
Q G + A L + + ++A N+++ + ++ A+ +FD M +D +W+
Sbjct: 282 QGGDGRSAKSLHCYVMRRGWDVDDIIAGNAIVDMYAKLSNIEAAQRMFDSMPVQDSVSWN 341
Query: 197 GMIKVYERKGYELEVIDLFTLMQK-EGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVR 255
+I Y + G E ++ + MQK EG++ + +SVL + L +L G ++HA ++
Sbjct: 342 TLITGYMQNGLANEAVERYGHMQKHEGLKAIQGTFVSVLPAYSHLGALQQGMRMHALSIK 401
Query: 256 CQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKV 315
+VDVYV + LI +Y KCG+L + L+F+ + WN+IISG +G G ++L +
Sbjct: 402 IGLNVDVYVGTCLIDLYAKCGKLAEAMLLFEKMPRRSTGPWNAIISGLGVHGHGAEALTL 461
Query: 316 FHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLG 375
F M G+ PD VT V +L+ACS+ G V +GR F+ M+ Y + P +HYACM D+LG
Sbjct: 462 FSRMQQEGIKPDHVTFVSLLAACSHAGLVDQGRSFFDVMQVTYDIVPIAKHYACMADMLG 521
Query: 376 RAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYIL 435
RAGQ+++A I+ MP +PD+ +WG+LLGACR H +++ +VA++ L +L+P+N G Y+L
Sbjct: 522 RAGQLDEAFNFIQNMPIKPDSAVWGALLGACRIHGNVEMGKVASQNLFELDPENVGYYVL 581
Query: 436 LSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMF-TGRDCVSHPEHPMIM 494
+SN+YA G++ V E+R +R++N+ K PG S IEV++ V++F +G HP+H I
Sbjct: 582 MSNMYAKVGKWDGVDEVRSLVRRQNLQKTPGWSSIEVKRSVNVFYSGNQTEPHPQHEEIQ 641
Query: 495 RMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVM 554
L + +R GY D SFVL DV+++EK H L HSE+LA+A+G++ P P+ +
Sbjct: 642 AELRSLLAKIRSVGYVSDYSFVLQDVEDDEKEHILNNHSERLAIAFGIINTPSRTPLHIY 701
Query: 555 KNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
KNLRVCGDCH+A K IS++ REII+RD+NRFHHFKDG CSC D+W
Sbjct: 702 KNLRVCGDCHNATKYISQITEREIIVRDSNRFHHFKDGHCSCGDFW 747
>gi|357149883|ref|XP_003575265.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Brachypodium distachyon]
Length = 877
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 231/616 (37%), Positives = 355/616 (57%), Gaps = 17/616 (2%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEK----NVVSWTVMLGGFIRDSRIDDA 56
+PE +VVSW A + G V G A L QM NV + + +L +
Sbjct: 263 VPETDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGSGAFNLG 322
Query: 57 RRLFDMMPEKDVVAQTNMVLG----YCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
R++ M + + + + G Y + G +D+ +++FD +P+++++ W +ISG +
Sbjct: 323 RQIHGFMVKANADSDNYIAFGLVDMYAKHGLLDDAKKVFDWIPQRDLVLWNALISGCSHG 382
Query: 113 NRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMI 168
+ A LF M ++ N + A+L I D ++ ++ + ++
Sbjct: 383 AQHAEALSLFCRMRKEGFDVNRTTLAAVLKSTASLEAISDTRQVHALAEKLGFLSDSHVV 442
Query: 169 LGLGQN----GEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVR 224
GL + + A VF++ D ++ MI + + + I LF M ++G+
Sbjct: 443 NGLIDSYWKCDCLNYAYRVFEKHGSYDIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLD 502
Query: 225 VNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLI 284
+ L S+L+ CASL++ + G+QVHA L++ QF DV+ + L+ Y KCG + L
Sbjct: 503 PDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDVFAGNALVYTYAKCGSIEDADLA 562
Query: 285 FDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKV 344
F K +V W+++I G AQ+G G+++L VFH M + P+ +T+ VL AC++ G V
Sbjct: 563 FSGLPEKGVVSWSAMIGGLAQHGHGKRALDVFHRMVDEHISPNHITMTSVLCACNHAGLV 622
Query: 345 KEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLG 404
E + F SMK + +E EHYACM+DLLGRAG+++DAM+L+ +MPF+ +A +WG+LL
Sbjct: 623 DEAKRYFNSMKEMFGIERTEEHYACMIDLLGRAGKLDDAMELVNSMPFQTNAAVWGALLA 682
Query: 405 ACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKP 464
A R H +L +AA+KL LEP+ +G ++LL+N YAS G + DVA++RK M+ V K
Sbjct: 683 ASRVHRDPELGRLAAEKLFILEPEKSGTHVLLANTYASAGMWDDVAKVRKLMKDSKVKKE 742
Query: 465 PGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEE 524
P SW+E++ KVH F D SHP I L+++G L+ +AGY P+ LHDVD+ E
Sbjct: 743 PAMSWVELKDKVHTFIVGD-KSHPRARDIYAKLDELGDLMTKAGYVPNVEVDLHDVDKNE 801
Query: 525 KVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDAN 584
K L +HSE+LAVA+ L+ P G PIRV KNLR+C DCH+A K IS ++ REII+RD N
Sbjct: 802 KELLLSHHSERLAVAFALISTPAGAPIRVKKNLRICRDCHAAFKFISDIVSREIIIRDIN 861
Query: 585 RFHHFKDGLCSCRDYW 600
RFHHF+DG CSCRDYW
Sbjct: 862 RFHHFRDGACSCRDYW 877
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 93/343 (27%), Positives = 172/343 (50%), Gaps = 13/343 (3%)
Query: 73 NMVLGYCQDGRV-DEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEV 131
N +L + R+ R +FDE+P +SW+++++ Y NN A F M +
Sbjct: 41 NHLLSFYSKCRLPGSARRVFDEIPDPCHVSWSSLVTAYSNNAMPRDALGAFRSMRSCSVR 100
Query: 132 SWTAMLMGYTQCGRIQDAWELFKAMPMKS-----VVASNSMILGLGQNGEVQKARVVFDQ 186
+L +C A+ M + + +N+++ G G V +AR+VFD+
Sbjct: 101 CNEFVLPVVLKCAPDAGFGTQLHALAMATGLGGDIFVANALVAMYGGFGFVDEARMVFDE 160
Query: 187 MR-EKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDH 245
E++ +W+G++ Y + + +F M GV+ N V++ C L+
Sbjct: 161 AGCERNTVSWNGLMSAYVKNDRCSHAVKVFGEMVWGGVQPNEFGFSCVVNACTGSRDLEA 220
Query: 246 GRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQ 305
GR+VHA ++R +D DV+ A+ L+ MY K G++ ++F D+V WN+ ISG
Sbjct: 221 GRKVHAMVIRTGYDKDVFTANALVDMYSKLGDIRMAAVVFGKVPETDVVSWNAFISGCVL 280
Query: 306 YGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTE 365
+G + +L++ +M SSG++P+ TL +L AC+ +G GR+I M ++
Sbjct: 281 HGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGSGAFNLGRQIHGFMVK---ANADSD 337
Query: 366 HYAC--MVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGAC 406
+Y +VD+ + G ++DA K+ + +P + D ++W +L+ C
Sbjct: 338 NYIAFGLVDMYAKHGLLDDAKKVFDWIP-QRDLVLWNALISGC 379
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 119/456 (26%), Positives = 199/456 (43%), Gaps = 49/456 (10%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIR---DSRIDDAR 57
+P+ VSW+++V Y M +A F M +V +L ++ D+
Sbjct: 63 IPDPCHVSWSSLVTAYSNNAMPRDALGAFRSMRSCSVRCNEFVLPVVLKCAPDAGFGTQL 122
Query: 58 RLFDMMPE--KDVVAQTNMVLGYCQDGRVDEGREIFDEMP-KKNVISWTTMISGYVNNNR 114
M D+ +V Y G VDE R +FDE ++N +SW ++S YV N+R
Sbjct: 123 HALAMATGLGGDIFVANALVAMYGGFGFVDEARMVFDEAGCERNTVSWNGLMSAYVKNDR 182
Query: 115 IDVARKLFEVMP----EKNEVSWTAMLMGYTQCGRIQDAWELFKAMPM-----KSVVASN 165
A K+F M + NE ++ ++ T R +A AM + K V +N
Sbjct: 183 CSHAVKVFGEMVWGGVQPNEFGFSCVVNACTG-SRDLEAGRKVHAMVIRTGYDKDVFTAN 241
Query: 166 SMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRV 225
+++ + G+++ A VVF ++ E D +W+ I G++ ++L M+ G+
Sbjct: 242 ALVDMYSKLGDIRMAAVVFGKVPETDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVP 301
Query: 226 NFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIF 285
N +L S+L CA + + GRQ+H +V+ D D Y+A L+ MY K G L K +F
Sbjct: 302 NVFTLSSILKACAGSGAFNLGRQIHGFMVKANADSDNYIAFGLVDMYAKHGLLDDAKKVF 361
Query: 286 DNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVK 345
D +D+V+WN++ISG + ++L +F M G + TL VL + + +
Sbjct: 362 DWIPQRDLVLWNALISGCSHGAQHAEALSLFCRMRKEGFDVNRTTLAAVLKSTASLEAIS 421
Query: 346 EGREIF-------------------------ESMKSKYLVEPKTEHY-----ACMVDLLG 375
+ R++ + + Y V K Y M+ L
Sbjct: 422 DTRQVHALAEKLGFLSDSHVVNGLIDSYWKCDCLNYAYRVFEKHGSYDIIAFTSMITALS 481
Query: 376 RAGQVEDAMKLIEAM---PFEPDAIIWGSLLGACRT 408
+ EDA+KL M +PD + SLL AC +
Sbjct: 482 QCDHGEDAIKLFMEMLRKGLDPDPFVLSSLLNACAS 517
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 133/287 (46%), Gaps = 13/287 (4%)
Query: 180 ARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCAS 239
AR VFD++ + +WS ++ Y + + F M+ VR N L VL CA
Sbjct: 56 ARRVFDEIPDPCHVSWSSLVTAYSNNAMPRDALGAFRSMRSCSVRCNEFVLPVVLK-CAP 114
Query: 240 LASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFA-SKDIVMWNS 298
A G Q+HA + D++VA+ L+ MY G + + +++FD ++ V WN
Sbjct: 115 DAGF--GTQLHALAMATGLGGDIFVANALVAMYGGFGFVDEARMVFDEAGCERNTVSWNG 172
Query: 299 IISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKY 358
++S Y + ++KVF EM GV P++ V++AC+ + ++ GR++ +M +
Sbjct: 173 LMSAYVKNDRCSHAVKVFGEMVWGGVQPNEFGFSCVVNACTGSRDLEAGRKV-HAMVIRT 231
Query: 359 LVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVA 418
+ +VD+ + G + A + +P E D + W + + C H + A
Sbjct: 232 GYDKDVFTANALVDMYSKLGDIRMAAVVFGKVP-ETDVVSWNAFISGCVLHGH---DQHA 287
Query: 419 AKKLLQLEPKNAGPYIL-LSNIY---ASQGRFHDVAELRKNMRKRNV 461
+ LLQ++ P + LS+I A G F+ ++ M K N
Sbjct: 288 LELLLQMKSSGLVPNVFTLSSILKACAGSGAFNLGRQIHGFMVKANA 334
Score = 38.9 bits (89), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 72/183 (39%), Gaps = 26/183 (14%)
Query: 233 VLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKD 292
+L+ A+ SL G +HA L++ + + L++ Y KC + +FD
Sbjct: 10 LLTRYAATQSLLQGAHIHAHLLKS--GLFAVFRNHLLSFYSKCRLPGSARRVFDEIPDPC 67
Query: 293 IVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKE------ 346
V W+S+++ Y+ + +L F M S V ++ L VL G +
Sbjct: 68 HVSWSSLVTAYSNNAMPRDALGAFRSMRSCSVRCNEFVLPVVLKCAPDAGFGTQLHALAM 127
Query: 347 ----GREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSL 402
G +IF + +V + G G V++A + + E + + W L
Sbjct: 128 ATGLGGDIFVA--------------NALVAMYGGFGFVDEARMVFDEAGCERNTVSWNGL 173
Query: 403 LGA 405
+ A
Sbjct: 174 MSA 176
>gi|413944893|gb|AFW77542.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 829
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 243/627 (38%), Positives = 366/627 (58%), Gaps = 43/627 (6%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEK----------NVVSWTVMLGGFIRDSR 52
ER VV WT ++ Y + G EA LF M E +++S LG F +
Sbjct: 217 ERTVVVWTLLITRYAQSGYSDEAVELFLDMLENGFQPDQYTLSSMLSACTELGSFRLGQQ 276
Query: 53 IDDARRLFDMMPEKDVVAQTNMVLGYCQ--DGR-VDEGREIFDEMPKKNVISWTTMISGY 109
+ + E D +V Y + +G+ + RE+F+ MPK NV++WT ++SGY
Sbjct: 277 LHSLALRLGL--ESDSCVSCGLVDMYAKSHNGQSLHNAREVFNRMPKHNVMAWTALLSGY 334
Query: 110 V-----NNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVA- 163
V +N + + K+ N +++++ML G QD+ +KS +A
Sbjct: 335 VQRGSQDNQVMILFCKMLNEGIRPNHITYSSMLKACANLGD-QDSGRQIHTHCVKSNLAD 393
Query: 164 ----SNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYER----KGYELEVIDLF 215
N+++ ++G +++AR FDQ+ EK+ ++SG + R + Y++E ++L
Sbjct: 394 LNVVGNALVSMYAESGSIEEARHAFDQLYEKNMVSFSGNLDGDGRSNTYQDYQIERMEL- 452
Query: 216 TLMQKEGVRV-NFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIK 274
G+ F SLIS AS+ L G+++HA ++ F D + + L++MY +
Sbjct: 453 ------GISTFTFGSLISA---AASVGMLTKGQRLHALSLKAGFGSDRAIGNSLVSMYSR 503
Query: 275 CGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGV 334
CG LV +FD +++ W S+ISG A++G ++L++FH+M ++GV P+DVT + V
Sbjct: 504 CGYLVDACQVFDEMNDHNVISWTSMISGLAKHGYAARALELFHDMIAAGVKPNDVTYIAV 563
Query: 335 LSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEP 394
LSACS+ G VKEG+E F M+ + + P+ EHYACMVDLLGR+G VEDA+ I MP +
Sbjct: 564 LSACSHAGLVKEGKEHFRMMQKHHGLIPRMEHYACMVDLLGRSGLVEDALDFINEMPCQV 623
Query: 395 DAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRK 454
DA++W +LLGAC+TH +D+ E+AA ++QLEP++ PY+LLSN+YA G + VA +R
Sbjct: 624 DALVWKTLLGACKTHNNMDIGEIAANHVIQLEPQDPAPYVLLSNLYAEAGLWDQVARIRS 683
Query: 455 NMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSS 514
MR +N++K G SW+ V+ +H F D SHP+ I LE + ++ GY PD+S
Sbjct: 684 LMRDKNLMKEKGLSWMHVDNTIHEFRAGD-TSHPQAEEIYTKLETLIREIKVMGYVPDTS 742
Query: 515 FVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGV-PIRVMKNLRVCGDCHSAIKLISKV 573
VLHD+ +E K L HSEK+AVA+GL+ PIR+ KNLRVC DCHSA+K +SK
Sbjct: 743 VVLHDMSDELKELCLLQHSEKIAVAFGLISCTSATKPIRIFKNLRVCVDCHSALKYVSKA 802
Query: 574 MGREIILRDANRFHHFKDGLCSCRDYW 600
GREIILRD+NRFH KDG CSC +YW
Sbjct: 803 TGREIILRDSNRFHRMKDGECSCGEYW 829
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 105/440 (23%), Positives = 201/440 (45%), Gaps = 53/440 (12%)
Query: 4 RNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMM 63
R++VSWTAM G EA LF + E+ ++ L + A LF +
Sbjct: 115 RDLVSWTAMASCLSRNGAEAEALRLFGETLEEGLLPNAFTLCAATQACF---ASELFHLA 171
Query: 64 PE-------------KDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYV 110
DV ++ + ++G + R +FD + ++ V+ WT +I+ Y
Sbjct: 172 GGAVLGLVFKLGFWGTDVSVGCALIDMFAKNGDLVAMRRVFDGLFERTVVVWTLLITRYA 231
Query: 111 NNNRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNS 166
+ D A +LF M E ++ + ++ML T+ G + +L ++ ++ + S+S
Sbjct: 232 QSGYSDEAVELFLDMLENGFQPDQYTLSSMLSACTELGSFRLGQQL-HSLALRLGLESDS 290
Query: 167 MI-LGL------GQNGE-VQKARVVFDQMREKDDATWSGMIKVYERKGYE-LEVIDLFTL 217
+ GL NG+ + AR VF++M + + W+ ++ Y ++G + +V+ LF
Sbjct: 291 CVSCGLVDMYAKSHNGQSLHNAREVFNRMPKHNVMAWTALLSGYVQRGSQDNQVMILFCK 350
Query: 218 MQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQF-DVDVYVASVLITMYIKCG 276
M EG+R N + S+L CA+L D GRQ+H V+ D++V V + L++MY + G
Sbjct: 351 MLNEGIRPNHITYSSMLKACANLGDQDSGRQIHTHCVKSNLADLNV-VGNALVSMYAESG 409
Query: 277 ELVKGKLIFDNFASKDIVMWNSIISG------YAQYGLGEKSLKVFHEMFSSGVMPDDVT 330
+ + + FD K++V ++ + G Y Y + L + F S
Sbjct: 410 SIEEARHAFDQLYEKNMVSFSGNLDGDGRSNTYQDYQIERMELGISTFTFGS-------- 461
Query: 331 LVGVLSACSYTGKVKEGREIFE-SMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEA 389
++SA + G + +G+ + S+K+ + + + +V + R G + DA ++ +
Sbjct: 462 ---LISAAASVGMLTKGQRLHALSLKAGFGSDRAIGN--SLVSMYSRCGYLVDACQVFDE 516
Query: 390 MPFEPDAIIWGSLLGACRTH 409
M + + I W S++ H
Sbjct: 517 MN-DHNVISWTSMISGLAKH 535
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 128/251 (50%), Gaps = 11/251 (4%)
Query: 161 VVASNSMILGLGQNGEVQKARVVFDQMRE--KDDATWSGMIKVYERKGYELEVIDLFTLM 218
V +NS++ + V AR VFD M +D +W+ M R G E E + LF
Sbjct: 84 AVVANSLLTLYSKCSAVAAARSVFDGMPVGLRDLVSWTAMASCLSRNGAEAEALRLFGET 143
Query: 219 QKEGVRVNFPSLISVLSVCASLASLDH--GRQVHAQLVRCQF-DVDVYVASVLITMYIKC 275
+EG+ N +L + C + + L H G V + + F DV V LI M+ K
Sbjct: 144 LEEGLLPNAFTLCAATQACFA-SELFHLAGGAVLGLVFKLGFWGTDVSVGCALIDMFAKN 202
Query: 276 GELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVL 335
G+LV + +FD + +V+W +I+ YAQ G ++++++F +M +G PD TL +L
Sbjct: 203 GDLVAMRRVFDGLFERTVVVWTLLITRYAQSGYSDEAVELFLDMLENGFQPDQYTLSSML 262
Query: 336 SACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRA--GQ-VEDAMKLIEAMPF 392
SAC+ G + G+++ S+ + +E + +VD+ ++ GQ + +A ++ MP
Sbjct: 263 SACTELGSFRLGQQL-HSLALRLGLESDSCVSCGLVDMYAKSHNGQSLHNAREVFNRMP- 320
Query: 393 EPDAIIWGSLL 403
+ + + W +LL
Sbjct: 321 KHNVMAWTALL 331
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 126/270 (46%), Gaps = 32/270 (11%)
Query: 1 MPERNVVSWTAMVRGYVEEG-MITEAGTLFWQMPEK----NVVSWTVMLGGFIRDSRIDD 55
MP+ NV++WTA++ GYV+ G + LF +M + N ++++ ML D
Sbjct: 319 MPKHNVMAWTALLSGYVQRGSQDNQVMILFCKMLNEGIRPNHITYSSMLKACANLGDQDS 378
Query: 56 ARRLFDMMPEKDV----VAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVN 111
R++ + ++ V +V Y + G ++E R FD++ +KN++S++ + G
Sbjct: 379 GRQIHTHCVKSNLADLNVVGNALVSMYAESGSIEEARHAFDQLYEKNMVSFSGNLDGDGR 438
Query: 112 NN--------RIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVA 163
+N R+++ F ++ +++ G + L A+ +K+
Sbjct: 439 SNTYQDYQIERMELGISTF---------TFGSLISAAASVGMLTKGQRL-HALSLKAGFG 488
Query: 164 S-----NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLM 218
S NS++ + G + A VFD+M + + +W+ MI + GY ++LF M
Sbjct: 489 SDRAIGNSLVSMYSRCGYLVDACQVFDEMNDHNVISWTSMISGLAKHGYAARALELFHDM 548
Query: 219 QKEGVRVNFPSLISVLSVCASLASLDHGRQ 248
GV+ N + I+VLS C+ + G++
Sbjct: 549 IAAGVKPNDVTYIAVLSACSHAGLVKEGKE 578
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 50/97 (51%), Gaps = 4/97 (4%)
Query: 246 GRQVHAQLVRCQ--FDVDVYVASVLITMYIKCGELVKGKLIFDNF--ASKDIVMWNSIIS 301
GR + L+R + D VA+ L+T+Y KC + + +FD +D+V W ++ S
Sbjct: 66 GRALQGHLLRTGSLLETDAVVANSLLTLYSKCSAVAAARSVFDGMPVGLRDLVSWTAMAS 125
Query: 302 GYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSAC 338
++ G ++L++F E G++P+ TL AC
Sbjct: 126 CLSRNGAEAEALRLFGETLEEGLLPNAFTLCAATQAC 162
>gi|359477907|ref|XP_002270439.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Vitis vinifera]
Length = 677
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 231/600 (38%), Positives = 355/600 (59%), Gaps = 28/600 (4%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMP 64
N+ + A++RG E E +V + +ML IR R+ L
Sbjct: 102 NLFVFNALIRGLAENSRF-----------EGSVSHFVLMLRLSIRPDRLTLPFVL----- 145
Query: 65 EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEV 124
K V A ++ LG C G V + FD + +++ YV + +LF+
Sbjct: 146 -KSVAALVDVGLGRCLHGGVMKLGLEFDSFVR------VSLVDMYVKIGELGFGLQLFDE 198
Query: 125 MPEKNEVS----WTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKA 180
P++N+ W ++ G + G + A LF+AMP ++ + NS+I G +NG++ +A
Sbjct: 199 SPQRNKAESILLWNVLINGCCKVGDLSKAASLFEAMPERNAGSWNSLINGFVRNGDLDRA 258
Query: 181 RVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASL 240
R +F QM EK+ +W+ MI + + G + + +F M +EGVR N +++S L C +
Sbjct: 259 RELFVQMPEKNVVSWTTMINGFSQNGDHEKALSMFWRMLEEGVRPNDLTVVSALLACTKI 318
Query: 241 ASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSII 300
+L G ++H L F ++ + + L+ MY KCG + +F KD++ W+ +I
Sbjct: 319 GALQVGERIHNYLSSNGFQLNRGIGTALVDMYAKCGNIKSASRVFVETKGKDLLTWSVMI 378
Query: 301 SGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLV 360
G+A +G +++L+ F +M S+G+ PD+V + +L+ACS++G V +G FESM+ Y +
Sbjct: 379 WGWAIHGCFDQALQCFVKMKSAGINPDEVIFLAILTACSHSGNVDQGLNFFESMRLDYSI 438
Query: 361 EPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAK 420
EP +HY +VDLLGRAG++++A+ I++MP PD +IWG+L ACR H +++AE+ A+
Sbjct: 439 EPTMKHYTLIVDLLGRAGRLDEALSFIQSMPINPDFVIWGALFCACRAHKNIEMAELTAE 498
Query: 421 KLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFT 480
KLLQLEPK+ G Y+ LSN+YA+ GR+ DV +R M+ R V K PG S+IEVE +VH F
Sbjct: 499 KLLQLEPKHPGSYVFLSNVYAAVGRWEDVERVRTLMKNRGVEKDPGWSYIEVEGQVHSFV 558
Query: 481 GRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAY 540
D +H I LE+I ++ GY P++++VLH+++EEEK +L HSEKLA+A+
Sbjct: 559 AGDH-AHVRAEEISLKLEEITASAKQEGYMPETAWVLHNIEEEEKEDALGSHSEKLALAF 617
Query: 541 GLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
GL+ G IR++KNLRVCGDCHS +K SK+ REIILRD RFHHFKDG CSC DYW
Sbjct: 618 GLISTAPGSTIRIVKNLRVCGDCHSMMKYASKLSRREIILRDIKRFHHFKDGTCSCGDYW 677
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 91/200 (45%), Gaps = 12/200 (6%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MPERN SW +++ G+V G + A LF QMPEKNVVSWT M+ GF ++ + A +F
Sbjct: 234 MPERNAGSWNSLINGFVRNGDLDRARELFVQMPEKNVVSWTTMINGFSQNGDHEKALSMF 293
Query: 61 DMMPEKDV----VAQTNMVLGYCQDGRVDEGREIFDEMPKK----NVISWTTMISGYVNN 112
M E+ V + + +L + G + G I + + N T ++ Y
Sbjct: 294 WRMLEEGVRPNDLTVVSALLACTKIGALQVGERIHNYLSSNGFQLNRGIGTALVDMYAKC 353
Query: 113 NRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGL- 171
I A ++F K+ ++W+ M+ G+ G A + F M + + L +
Sbjct: 354 GNIKSASRVFVETKGKDLLTWSVMIWGWAIHGCFDQALQCFVKMKSAGINPDEVIFLAIL 413
Query: 172 ---GQNGEVQKARVVFDQMR 188
+G V + F+ MR
Sbjct: 414 TACSHSGNVDQGLNFFESMR 433
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 78/347 (22%), Positives = 141/347 (40%), Gaps = 35/347 (10%)
Query: 242 SLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIIS 301
+L Q+HAQ+ + V + LI+ L IF F ++ ++N++I
Sbjct: 52 TLPQLHQIHAQIFLHNLFSNSRVVTQLISSSCSLKSLDYALSIFRCFDHPNLFVFNALIR 111
Query: 302 GYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVE 361
G A+ E S+ F M + PD +TL VL + + V GR + + K +E
Sbjct: 112 GLAENSRFEGSVSHFVLMLRLSIRPDRLTLPFVLKSVAALVDVGLGRCLHGGVM-KLGLE 170
Query: 362 PKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDA---IIWGSLLGACRTHMKLDLAEVA 418
+ +VD+ + G++ ++L + P A ++W L+ C K+ A
Sbjct: 171 FDSFVRVSLVDMYVKIGELGFGLQLFDESPQRNKAESILLWNVLINGC---CKVGDLSKA 227
Query: 419 AKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHM 478
A + +NAG + L N + G EL M ++NV+ SW M
Sbjct: 228 ASLFEAMPERNAGSWNSLINGFVRNGDLDRARELFVQMPEKNVV-----SWTT------M 276
Query: 479 FTGRDCVSHPEHPMIM--RMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSL----RYH 532
G E + M RMLE+ G P+ V+ + K+ +L R H
Sbjct: 277 INGFSQNGDHEKALSMFWRMLEE--------GVRPNDLTVVSALLACTKIGALQVGERIH 328
Query: 533 SEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREII 579
+ + + +L G+ ++ CG+ SA ++ + G++++
Sbjct: 329 NYLSSNGF---QLNRGIGTALVDMYAKCGNIKSASRVFVETKGKDLL 372
>gi|225432698|ref|XP_002278762.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14820
[Vitis vinifera]
gi|297737070|emb|CBI26271.3| unnamed protein product [Vitis vinifera]
Length = 727
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 226/557 (40%), Positives = 344/557 (61%), Gaps = 9/557 (1%)
Query: 52 RIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNV----ISWTTMIS 107
RI +AR +FD M +DVV + M+ GYCQ G ++ +F+EM NV + +T++S
Sbjct: 172 RIAEARLMFDKMFHRDVVTWSIMIDGYCQSGLFNDALLLFEEMKNYNVEPDEMMLSTVLS 231
Query: 108 GYVNNNRIDVARKLFEVMPEKNEVS----WTAMLMGYTQCGRIQDAWELFKAMPMKSVVA 163
+ + + + + E N V +A++ Y CG + A LF+ M K++VA
Sbjct: 232 ACGRAGNLSYGKMIHDFIMENNIVVDPHLQSALVTMYASCGSMDLALNLFEKMTPKNLVA 291
Query: 164 SNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGV 223
S +M+ G + G+++ AR VF+QM +KD WS MI Y E ++LF MQ G+
Sbjct: 292 STAMVTGYSKLGQIENARSVFNQMVKKDLVCWSAMISGYAESDSPQEALNLFNEMQSLGI 351
Query: 224 RVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKL 283
+ + +++SV++ CA L +LD + +H + + F + + + LI MY KCG L + +
Sbjct: 352 KPDQVTMLSVITACAHLGALDQAKWIHLFVDKNGFGGALPINNALIEMYAKCGSLERARR 411
Query: 284 IFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGK 343
IFD K+++ W +IS +A +G +L+ FH+M + P+ +T VGVL ACS+ G
Sbjct: 412 IFDKMPRKNVISWTCMISAFAMHGDAGSALRFFHQMEDENIEPNGITFVGVLYACSHAGL 471
Query: 344 VKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
V+EGR+IF SM +++ + PK HY CMVDL GRA + +A++L+EAMP P+ IIWGSL+
Sbjct: 472 VEEGRKIFYSMINEHNITPKHVHYGCMVDLFGRANLLREALELVEAMPLAPNVIIWGSLM 531
Query: 404 GACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIK 463
ACR H +++L E AAK+LL+L+P + G ++ LSNIYA R+ DV ++RK M+ + + K
Sbjct: 532 AACRVHGEIELGEFAAKRLLELDPDHDGAHVFLSNIYAKARRWEDVGQVRKLMKHKGISK 591
Query: 464 PPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEE 523
GCS E+ ++H F D SH I L ++ L+ GY P++ +L D++EE
Sbjct: 592 ERGCSRFELNNEIHEFLVAD-RSHKHADEIYEKLYEVVSKLKLVGYSPNTCSILVDLEEE 650
Query: 524 EKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDA 583
EK + +HSEKLA+ YGL++ G IR++KNLRVC DCH+ IKL SKV REI++RD
Sbjct: 651 EKKEVVLWHSEKLALCYGLMRDGTGSCIRIIKNLRVCEDCHTFIKLASKVYEREIVVRDR 710
Query: 584 NRFHHFKDGLCSCRDYW 600
RFHH+KDG+CSC+DYW
Sbjct: 711 TRFHHYKDGVCSCKDYW 727
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 92/372 (24%), Positives = 162/372 (43%), Gaps = 53/372 (14%)
Query: 149 AWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYE 208
A +F +P N + L ++ E +K +V+++MR + A
Sbjct: 75 ALSVFNLIPKPETHLCNRFLRELSRSEEPEKTLLVYERMRTQGLA--------------- 119
Query: 209 LEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVL 268
+D R +FP L+ LS + SL G ++H + FD D +V + L
Sbjct: 120 ---VD----------RFSFPPLLKALS---RVKSLVEGLEIHGLAAKLGFDSDPFVQTGL 163
Query: 269 ITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDD 328
+ MY CG + + +L+FD +D+V W+ +I GY Q GL +L +F EM + V PD+
Sbjct: 164 VRMYAACGRIAEARLMFDKMFHRDVVTWSIMIDGYCQSGLFNDALLLFEEMKNYNVEPDE 223
Query: 329 VTLVGVLSACSYTGKVKEGREIFES-MKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLI 387
+ L VLSAC G + G+ I + M++ +V+P + + +V + G ++ A+ L
Sbjct: 224 MMLSTVLSACGRAGNLSYGKMIHDFIMENNIVVDPHLQ--SALVTMYASCGSMDLALNLF 281
Query: 388 EAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFH 447
E M P ++ + + + KL E A Q+ K+ + + + YA
Sbjct: 282 EKMT--PKNLVASTAM--VTGYSKLGQIENARSVFNQMVKKDLVCWSAMISGYAESDSPQ 337
Query: 448 DVAELRKNMRKRNVIKPPGCSWIEV------------EKKVHMFTGRDCV--SHPEHPMI 493
+ L M+ IKP + + V K +H+F ++ + P + +
Sbjct: 338 EALNLFNEMQSLG-IKPDQVTMLSVITACAHLGALDQAKWIHLFVDKNGFGGALPINNAL 396
Query: 494 MRMLEKIGGLLR 505
+ M K G L R
Sbjct: 397 IEMYAKCGSLER 408
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 108/225 (48%), Gaps = 14/225 (6%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVV 69
+A+V Y G + A LF +M KN+V+ T M+ G+ + +I++AR +F+ M +KD+V
Sbjct: 262 SALVTMYASCGSMDLALNLFEKMTPKNLVASTAMVTGYSKLGQIENARSVFNQMVKKDLV 321
Query: 70 AQTNMVLGYCQDGRVDEGREIFDEMP----KKNVISWTTMISGYVNNNRIDVARKLFEVM 125
+ M+ GY + E +F+EM K + ++ ++I+ + +D A K +
Sbjct: 322 CWSAMISGYAESDSPQEALNLFNEMQSLGIKPDQVTMLSVITACAHLGALDQA-KWIHLF 380
Query: 126 PEKNEVSW-----TAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKA 180
+KN A++ Y +CG ++ A +F MP K+V++ MI +G+ A
Sbjct: 381 VDKNGFGGALPINNALIEMYAKCGSLERARRIFDKMPRKNVISWTCMISAFAMHGDAGSA 440
Query: 181 RVVFDQMR----EKDDATWSGMIKVYERKGYELEVIDLFTLMQKE 221
F QM E + T+ G++ G E +F M E
Sbjct: 441 LRFFHQMEDENIEPNGITFVGVLYACSHAGLVEEGRKIFYSMINE 485
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 90/199 (45%), Gaps = 43/199 (21%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
M +N+V+ TAMV GY + G I A ++F QM +K++V W+ M+ G+ +A LF
Sbjct: 284 MTPKNLVASTAMVTGYSKLGQIENARSVFNQMVKKDLVCWSAMISGYAESDSPQEALNLF 343
Query: 61 DMMP----EKDVVAQTNMVLG-----------------------------------YCQD 81
+ M + D V +++ Y +
Sbjct: 344 NEMQSLGIKPDQVTMLSVITACAHLGALDQAKWIHLFVDKNGFGGALPINNALIEMYAKC 403
Query: 82 GRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMP----EKNEVSWTAML 137
G ++ R IFD+MP+KNVISWT MIS + + A + F M E N +++ +L
Sbjct: 404 GSLERARRIFDKMPRKNVISWTCMISAFAMHGDAGSALRFFHQMEDENIEPNGITFVGVL 463
Query: 138 MGYTQCGRIQDAWELFKAM 156
+ G +++ ++F +M
Sbjct: 464 YACSHAGLVEEGRKIFYSM 482
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 97/220 (44%), Gaps = 15/220 (6%)
Query: 232 SVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVK----GKLIFDN 287
++ S +S SL H +QVHAQ++R + D S+L+ + I L +F+
Sbjct: 25 TLFSALSSATSLTHLKQVHAQILRSKLDRST---SLLVKLVISSCALSSSLDYALSVFNL 81
Query: 288 FASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEG 347
+ + N + ++ EK+L V+ M + G+ D + +L A S + EG
Sbjct: 82 IPKPETHLCNRFLRELSRSEEPEKTLLVYERMRTQGLAVDRFSFPPLLKALSRVKSLVEG 141
Query: 348 REIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL-GAC 406
EI + +K + +V + G++ +A + + M F D + W ++ G C
Sbjct: 142 LEI-HGLAAKLGFDSDPFVQTGLVRMYAACGRIAEARLMFDKM-FHRDVVTWSIMIDGYC 199
Query: 407 RTHMKLD-LAEVAAKKLLQLEPKNAGPYILLSNIYASQGR 445
++ + D L K +EP ++LS + ++ GR
Sbjct: 200 QSGLFNDALLLFEEMKNYNVEPDE----MMLSTVLSACGR 235
>gi|414872095|tpg|DAA50652.1| TPA: hypothetical protein ZEAMMB73_776700 [Zea mays]
Length = 647
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 220/599 (36%), Positives = 356/599 (59%), Gaps = 44/599 (7%)
Query: 12 MVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQ 71
++ Y + G A LF ++P++NV+SW +++GG++++ ++ AR+LFD MP ++V
Sbjct: 83 LLLAYADLGDFPTARGLFERIPKRNVMSWNILIGGYVKNGDLETARKLFDEMPARNVATW 142
Query: 72 TNMVLGYCQDGRVDEGREIF----------DEMPKKNVISWTTMISGYVNNNRIDVARKL 121
MV G G +E F DE ++ + V+ ++ +
Sbjct: 143 NAMVAGLTNSGLNEESLGFFFAMRREGMQPDEYGLGSLFRCCAGLRDVVSGRQVHA--YV 200
Query: 122 FEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKAR 181
+++ +++ Y +CG ++D +A+P ++V+ N+ I G QNG+ + A
Sbjct: 201 VRSGLDRDMCVGSSLAHMYMRCGFLRDGEAALRALPSLNIVSCNTTISGRTQNGDAEGA- 259
Query: 182 VVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLA 241
++ F LM+ GV N + +S ++ C+ LA
Sbjct: 260 ------------------------------LEFFCLMRGAGVEANAVTFVSAVTSCSDLA 289
Query: 242 SLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIIS 301
+L G+Q+HA ++ D V V + L+ MY +CG L + + ++ D+V+ +++IS
Sbjct: 290 ALAQGQQIHALAIKTGVDKVVPVMTSLVHMYSRCGCLGDSERVCLEYSGTDLVLCSAMIS 349
Query: 302 GYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVE 361
Y +G G+K++ +F +M ++G P++VT + +L ACS++G EG FE M Y ++
Sbjct: 350 AYGFHGHGQKAVGLFKQMMAAGAEPNEVTFLTLLYACSHSGLKDEGMNCFELMTKTYGLQ 409
Query: 362 PKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKK 421
P +HY C+VDLLGR+G + +A LI +MP +PD +IW +LL AC+T K D+AE A++
Sbjct: 410 PSVKHYTCIVDLLGRSGCLNEAEDLILSMPVQPDGVIWKTLLSACKTQKKFDMAERIAER 469
Query: 422 LLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTG 481
+++L+P ++ Y+LLSNI A+ R+ DV+++R+ MR++NV K PG SW+E++ ++H F
Sbjct: 470 VIELDPHDSASYVLLSNIRATSSRWEDVSKVRETMREQNVRKEPGVSWVELKGQIHQFCT 529
Query: 482 RDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYG 541
D SH I+ LE++ +R+ GY PD S V HD+++EEK SL +HSEKLA+A+
Sbjct: 530 GD-ESHSRQREIVECLEEMMTRIRQCGYAPDMSMVFHDMEDEEKEVSLAHHSEKLAIAFA 588
Query: 542 LVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
+ LPEGVPIRVMKNLRVC DCH AIKL+SKV+GREI++RD +RFHHFKDG CSC DYW
Sbjct: 589 FLSLPEGVPIRVMKNLRVCDDCHVAIKLMSKVIGREIVVRDVSRFHHFKDGKCSCGDYW 647
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 77/354 (21%), Positives = 143/354 (40%), Gaps = 55/354 (15%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
+P+RNV+SW ++ GYV+ G + A LF +MP +NV +W M+ G +++ F
Sbjct: 103 IPKRNVMSWNILIGGYVKNGDLETARKLFDEMPARNVATWNAMVAGLTNSGLNEESLGFF 162
Query: 61 ------DMMPE--------------KDVVA-------------QTNMVLG------YCQD 81
M P+ +DVV+ +M +G Y +
Sbjct: 163 FAMRREGMQPDEYGLGSLFRCCAGLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRC 222
Query: 82 GRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMP----EKNEVSWTAML 137
G + +G +P N++S T ISG N + A + F +M E N V++ + +
Sbjct: 223 GFLRDGEAALRALPSLNIVSCNTTISGRTQNGDAEGALEFFCLMRGAGVEANAVTFVSAV 282
Query: 138 MGYTQCGRIQDAWELFKAMPMKS-----VVASNSMILGLGQNGEVQKARVVFDQMREKDD 192
+ + ++ A+ +K+ V S++ + G + + V + D
Sbjct: 283 TSCSDLAALAQGQQI-HALAIKTGVDKVVPVMTSLVHMYSRCGCLGDSERVCLEYSGTDL 341
Query: 193 ATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQ 252
S MI Y G+ + + LF M G N + +++L C+ D G
Sbjct: 342 VLCSAMISAYGFHGHGQKAVGLFKQMMAAGAEPNEVTFLTLLYACSHSGLKDEGMNCFEL 401
Query: 253 LVRC---QFDVDVYVASVLITMYIKCGELVKGK-LIFDNFASKDIVMWNSIISG 302
+ + Q V Y + ++ + + G L + + LI D V+W +++S
Sbjct: 402 MTKTYGLQPSVKHY--TCIVDLLGRSGCLNEAEDLILSMPVQPDGVIWKTLLSA 453
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 74/200 (37%), Gaps = 44/200 (22%)
Query: 228 PSLIS-VLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFD 286
P L S + C +L L RQ+HA D + A+ L+ Y G+ + +F+
Sbjct: 45 PGLFSHIFRACQALPLL---RQLHAFAATSGAAADRFTANHLLLAYADLGDFPTARGLFE 101
Query: 287 NFASKDIVMWNSIISGYAQ-------------------------------YGLGEKSLKV 315
++++ WN +I GY + GL E+SL
Sbjct: 102 RIPKRNVMSWNILIGGYVKNGDLETARKLFDEMPARNVATWNAMVAGLTNSGLNEESLGF 161
Query: 316 FHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLG 375
F M G+ PD+ L + C+ V GR++ Y+V + C+ L
Sbjct: 162 FFAMRREGMQPDEYGLGSLFRCCAGLRDVVSGRQVH-----AYVVRSGLDRDMCVGSSLA 216
Query: 376 ----RAGQVEDAMKLIEAMP 391
R G + D + A+P
Sbjct: 217 HMYMRCGFLRDGEAALRALP 236
>gi|225450565|ref|XP_002281942.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48910
isoform 1 [Vitis vinifera]
Length = 672
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 241/579 (41%), Positives = 360/579 (62%), Gaps = 21/579 (3%)
Query: 36 NVVSWTVMLGGFIRDSRIDDARRLF-DMM-----PEKDVVAQTNMVLGYCQD-GRVDEGR 88
NV W M+ I ++ A L+ +MM P K VL C D G V EG
Sbjct: 101 NVFLWNCMIKVCIENNEPFKAILLYYEMMVAHFRPNKYTYPA---VLKACSDAGVVAEGV 157
Query: 89 EIFDEMPKKNVIS----WTTMISGYVNNNRIDVARKLFEVMP-EKNEVSWTAMLMGYTQC 143
++ + K + ++ I Y + R+ AR++ + E + V W AM+ GY +
Sbjct: 158 QVHAHLVKHGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRF 217
Query: 144 GRIQDAWELFKAMPMKSVVAS-NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVY 202
G ++ A ELF+ MP +S++++ N+MI G + G V+ AR FD+M+E+D+ +WS MI Y
Sbjct: 218 GEVEAARELFEGMPDRSMISTWNAMISGFSRCGMVEVAREFFDEMKERDEISWSAMIDGY 277
Query: 203 ERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDV 262
++G +E +++F MQKE +R L SVLS CA+L +LD GR +H R +D
Sbjct: 278 IQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDG 337
Query: 263 YVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSS 322
+ + L+ MY KCG + +F+ ++K++ WN++I G A +G E ++ +F +M
Sbjct: 338 VLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKM--- 394
Query: 323 GVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVED 382
+ P+++T VGVL+AC++ G V++G IF SM+ +Y VEP+ EHY C+VDLLGRAG + +
Sbjct: 395 DINPNEITFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTE 454
Query: 383 AMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYAS 442
A K++ ++P EP +WG+LLGACR H ++L E K LL+LEP+N+G Y LLSNIYA
Sbjct: 455 AEKVVSSIPTEPTPAVWGALLGACRKHGNVELGERVGKILLELEPQNSGRYTLLSNIYAK 514
Query: 443 QGRFHDVAELRKNMRKRNVIKPPGCSWIEVEK-KVHMFTGRDCVSHPEHPMIMRMLEKIG 501
GR+ +V E+RK M++R + PG S I++ + +VH F D SHP+ I +ML+K+
Sbjct: 515 AGRWEEVGEVRKLMKERGIKTTPGTSIIDLGRGEVHKFIIGDG-SHPQVKDIYQMLDKVK 573
Query: 502 GLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCG 561
L+ GY PD S VL D+DEEEK ++ HSEKLA+ +GL+ G IR++KNLRVC
Sbjct: 574 ERLQMEGYEPDPSQVLFDIDEEEKETAVWQHSEKLAIGFGLINTSPGTTIRIVKNLRVCE 633
Query: 562 DCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
DCHSA KLIS+V REII+RD R+HHF++G CSC+D+W
Sbjct: 634 DCHSATKLISQVYNREIIVRDRIRYHHFRNGACSCKDFW 672
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 121/230 (52%), Gaps = 12/230 (5%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVS-WTVMLGGFIRDSRIDDARRLFD 61
E + V W AM+ GY+ G + A LF MP+++++S W M+ GF R ++ AR FD
Sbjct: 201 EVDAVCWNAMIDGYLRFGEVEAARELFEGMPDRSMISTWNAMISGFSRCGMVEVAREFFD 260
Query: 62 MMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNV----ISWTTMISGYVNNNRIDV 117
M E+D ++ + M+ GY Q+G E EIF +M K+ + +++S N +D
Sbjct: 261 EMKERDEISWSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQ 320
Query: 118 ARKLFEVMPEKNEVSW-----TAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLG 172
R + ++N + T+++ Y +CGRI AWE+F+ M K V + N+MI GL
Sbjct: 321 GRWI-HTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLA 379
Query: 173 QNGEVQKARVVFDQMR-EKDDATWSGMIKVYERKGYELEVIDLFTLMQKE 221
+G + A +F +M ++ T+ G++ G + + +F M+KE
Sbjct: 380 MHGRAEDAIDLFSKMDINPNEITFVGVLNACAHGGLVQKGLTIFNSMRKE 429
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 91/366 (24%), Positives = 170/366 (46%), Gaps = 55/366 (15%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIR----DSRIDDARRLF 60
N ++ A+++ + G++ E + + + + +L IR R+ +ARR+
Sbjct: 136 NKYTYPAVLKACSDAGVVAEGVQVHAHLVKHGLGGDGHILSSAIRMYASFGRLVEARRIL 195
Query: 61 D-MMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVIS-WTTMISGYVNNNRIDVA 118
D E D V M+ GY + G V+ RE+F+ MP +++IS W MISG+ ++VA
Sbjct: 196 DDKGGEVDAVCWNAMIDGYLRFGEVEAARELFEGMPDRSMISTWNAMISGFSRCGMVEVA 255
Query: 119 RKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAM------PMKSVVAS-------- 164
R+ F+ M E++E+SW+AM+ GY Q G +A E+F M P K V+ S
Sbjct: 256 REFFDEMKERDEISWSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANL 315
Query: 165 ---------------NSM----ILGL------GQNGEVQKARVVFDQMREKDDATWSGMI 199
NS+ +LG + G + A VF++M K+ ++W+ MI
Sbjct: 316 GALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMI 375
Query: 200 KVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFD 259
G + IDLF+ M + N + + VL+ CA + G + + R ++
Sbjct: 376 GGLAMHGRAEDAIDLFSKMD---INPNEITFVGVLNACAHGGLVQKGLTIFNSM-RKEYG 431
Query: 260 VDVYVA--SVLITMYIKCGELVKGKLIFDNFASKDI-VMWNSIISGYAQYG---LGEKSL 313
V+ + ++ + + G L + + + + ++ +W +++ ++G LGE+
Sbjct: 432 VEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALLGACRKHGNVELGERVG 491
Query: 314 KVFHEM 319
K+ E+
Sbjct: 492 KILLEL 497
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 84/328 (25%), Positives = 146/328 (44%), Gaps = 26/328 (7%)
Query: 142 QCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKV 201
+ G +QD++ + + V++N + + + VFD +R+ + W+ MIKV
Sbjct: 59 RTGHLQDSYIAGSLVKSYANVSTNRYL-------SFESSLRVFDFVRKPNVFLWNCMIKV 111
Query: 202 YERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVD 261
+ I L+ M R N + +VL C+ + G QVHA LV+ D
Sbjct: 112 CIENNEPFKAILLYYEMMVAHFRPNKYTYPAVLKACSDAGVVAEGVQVHAHLVKHGLGGD 171
Query: 262 VYVASVLITMYIKCGELVKGKLIFDNFASK-DIVMWNSIISGYAQYGLGEKSLKVFHEMF 320
++ S I MY G LV+ + I D+ + D V WN++I GY ++G E + ++F M
Sbjct: 172 GHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRFGEVEAARELFEGMP 231
Query: 321 SSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQV 380
++ T ++S S G V+ RE F+ MK + + ++ M+D + G
Sbjct: 232 DRSMIS---TWNAMISGFSRCGMVEVAREFFDEMKERDEIS-----WSAMIDGYIQEGCF 283
Query: 381 EDAMKLIEAMPFE---PDAIIWGSLLGACRTHMKLD----LAEVAAKKLLQLEPKNAGPY 433
+A+++ M E P + S+L AC LD + A + +QL+
Sbjct: 284 MEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTS- 342
Query: 434 ILLSNIYASQGRFHDVAELRKNMRKRNV 461
L ++YA GR E+ + M + V
Sbjct: 343 --LVDMYAKCGRIDLAWEVFEKMSNKEV 368
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 102/223 (45%), Gaps = 19/223 (8%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM------PEK----NVVSWTVMLGGFIRD 50
M ER+ +SW+AM+ GY++EG EA +F QM P K +V+S LG +
Sbjct: 262 MKERDEISWSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQG 321
Query: 51 SRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYV 110
I + + + D V T++V Y + GR+D E+F++M K V SW MI G
Sbjct: 322 RWIHTYAKRNSI--QLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLA 379
Query: 111 NNNRIDVARKLFEVMP-EKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMIL 169
+ R + A LF M NE+++ +L G +Q +F +M + V
Sbjct: 380 MHGRAEDAIDLFSKMDINPNEITFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHY 439
Query: 170 G-----LGQNGEVQKA-RVVFDQMREKDDATWSGMIKVYERKG 206
G LG+ G + +A +VV E A W ++ + G
Sbjct: 440 GCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALLGACRKHG 482
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/277 (20%), Positives = 111/277 (40%), Gaps = 40/277 (14%)
Query: 221 EGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCG---- 276
E +++ +++ +L+ + SL H +Q HA ++R D Y+A L+ Y
Sbjct: 26 ETSKLSHKAILHLLNTQCT-TSLHHLKQAHALILRTGHLQDSYIAGSLVKSYANVSTNRY 84
Query: 277 -ELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVL 335
+FD ++ +WN +I + K++ +++EM + P+ T VL
Sbjct: 85 LSFESSLRVFDFVRKPNVFLWNCMIKVCIENNEPFKAILLYYEMMVAHFRPNKYTYPAVL 144
Query: 336 SACSYTGKVKEGREIFESM------KSKYLVEPKTEHYA--------------------- 368
ACS G V EG ++ + +++ YA
Sbjct: 145 KACSDAGVVAEGVQVHAHLVKHGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDA 204
Query: 369 ----CMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQ 424
M+D R G+VE A +L E MP W +++ + + EVA + +
Sbjct: 205 VCWNAMIDGYLRFGEVEAARELFEGMPDRSMISTWNAMISGFS---RCGMVEVAREFFDE 261
Query: 425 LEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNV 461
++ ++ + + + Y +G F + E+ M+K +
Sbjct: 262 MKERDEISWSAMIDGYIQEGCFMEALEIFHQMQKEKI 298
>gi|125601229|gb|EAZ40805.1| hypothetical protein OsJ_25283 [Oryza sativa Japonica Group]
Length = 492
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 216/492 (43%), Positives = 309/492 (62%), Gaps = 1/492 (0%)
Query: 109 YVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMI 168
Y R+D+AR F+ P ++ ML Y + +A ++F MPM+ +V+ N+MI
Sbjct: 2 YAKAGRVDLARDAFDEAPLRDVFLCNVMLAAYVSRSEVAEARKVFDGMPMRDLVSWNTMI 61
Query: 169 LGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFP 228
G GEV AR +FD ++D +WS MI Y + E ++L+ M + +
Sbjct: 62 HGYAMRGEVGLAREIFDGTEDRDAFSWSSMISAYAKSRRSKEALELWREMHAASIIPDCI 121
Query: 229 SLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNF 288
+L+SV+S C+ L +L G +VH + + ++D+ + + LI MY KCG++ + +FD
Sbjct: 122 TLVSVVSACSDLGALAVGAEVHRFVESNRIELDLKLGTALIDMYAKCGDIESAQRVFDRM 181
Query: 289 ASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGR 348
KD+ W+S+I G A +GLG +SL +F +M S G+ P+ VT VGVL AC++ G V EG+
Sbjct: 182 PEKDVQTWSSMIIGLANHGLGHESLSLFSKMISEGMKPNGVTFVGVLIACTHVGLVSEGK 241
Query: 349 EIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRT 408
+ F SM + +EP EHY CMVDLLGR+G VE+A +LI +M FEPD IIW +LLGACR
Sbjct: 242 KYFRSMNEVHGIEPTVEHYGCMVDLLGRSGHVEEARQLIRSMTFEPDTIIWRALLGACRI 301
Query: 409 HMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCS 468
H +++AE A KL L+P G Y+LLSNIYA + VAE+RK +R+ N+ + PG S
Sbjct: 302 HKNVEIAEEAMAKLRVLDPLGDGHYVLLSNIYAQANSWEGVAEMRKTIRRDNIQRIPGRS 361
Query: 469 WIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHS 528
IE ++K+H F D + HP I R+LE++ L++AGY P + VL D+DE+ K S
Sbjct: 362 SIEWDEKIHEFVSGDRL-HPRSKEIYRVLEEMMDRLKQAGYKPMTGLVLQDIDEQSKERS 420
Query: 529 LRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHH 588
L HSEKLA+A+ L+ P IR+ KNLR C DCHSA+KLIS V R++I+RD NRFHH
Sbjct: 421 LAEHSEKLAIAFALLTTPARSTIRITKNLRACEDCHSAMKLISLVYDRKLIVRDRNRFHH 480
Query: 589 FKDGLCSCRDYW 600
F +G CSC+DYW
Sbjct: 481 FSEGQCSCKDYW 492
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 115/243 (47%), Gaps = 12/243 (4%)
Query: 16 YVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMV 75
Y + G + A F + P ++V VML ++ S + +AR++FD MP +D+V+ M+
Sbjct: 2 YAKAGRVDLARDAFDEAPLRDVFLCNVMLAAYVSRSEVAEARKVFDGMPMRDLVSWNTMI 61
Query: 76 LGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTA 135
GY G V REIFD ++ SW++MIS Y + R A +L+ M + +
Sbjct: 62 HGYAMRGEVGLAREIFDGTEDRDAFSWSSMISAYAKSRRSKEALELWREMHAASIIPDCI 121
Query: 136 MLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGL----------GQNGEVQKARVVFD 185
L+ D L + V SN + L L + G+++ A+ VFD
Sbjct: 122 TLVSVVSA--CSDLGALAVGAEVHRFVESNRIELDLKLGTALIDMYAKCGDIESAQRVFD 179
Query: 186 QMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDH 245
+M EKD TWS MI G E + LF+ M EG++ N + + VL C + +
Sbjct: 180 RMPEKDVQTWSSMIIGLANHGLGHESLSLFSKMISEGMKPNGVTFVGVLIACTHVGLVSE 239
Query: 246 GRQ 248
G++
Sbjct: 240 GKK 242
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 105/248 (42%), Gaps = 49/248 (19%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MP R++VSW M+ GY G + A +F +++ SW+ M+ + + R +A L+
Sbjct: 49 MPMRDLVSWNTMIHGYAMRGEVGLAREIFDGTEDRDAFSWSSMISAYAKSRRSKEALELW 108
Query: 61 DMMP---------------------------------------EKDVVAQTNMVLGYCQD 81
M E D+ T ++ Y +
Sbjct: 109 REMHAASIIPDCITLVSVVSACSDLGALAVGAEVHRFVESNRIELDLKLGTALIDMYAKC 168
Query: 82 GRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEK----NEVSWTAML 137
G ++ + +FD MP+K+V +W++MI G N+ + LF M + N V++ +L
Sbjct: 169 GDIESAQRVFDRMPEKDVQTWSSMIIGLANHGLGHESLSLFSKMISEGMKPNGVTFVGVL 228
Query: 138 MGYTQCGRIQDAWELFKAMP-----MKSVVASNSMILGLGQNGEVQKARVVFDQMR-EKD 191
+ T G + + + F++M +V M+ LG++G V++AR + M E D
Sbjct: 229 IACTHVGLVSEGKKYFRSMNEVHGIEPTVEHYGCMVDLLGRSGHVEEARQLIRSMTFEPD 288
Query: 192 DATWSGMI 199
W ++
Sbjct: 289 TIIWRALL 296
>gi|225451187|ref|XP_002271063.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 805
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 229/617 (37%), Positives = 358/617 (58%), Gaps = 19/617 (3%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM------PEKNVVSWTVMLGGFIRDSRID 54
MP ++VV W +++ GYV+ G A LF++M P ++ + G I + ++
Sbjct: 191 MPNKDVVCWNSIIGGYVQAGCFDVAFQLFFEMHGSGIKPSPITMTSLIQACGGIGNLKLG 250
Query: 55 DARR--LFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+ + D++ T+ V Y + G ++ R +F +MP +N++SW MISG V N
Sbjct: 251 KCMHGYVLGLGLGNDILVLTSFVDMYSKMGDIESARWVFYKMPTRNLVSWNAMISGCVRN 310
Query: 113 NRIDVARKLFEVMPEKNE----VSWTAMLMGYTQCGRIQDAWELFKAMPMKS----VVAS 164
+ + LF + + + ++L G +Q + ++ ++S ++ S
Sbjct: 311 GLVGESFDLFHRLVRSSGGFDLTTIVSLLQGCSQTASLATG-KILHGCAIRSFESNLILS 369
Query: 165 NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVR 224
+++ + G +++A VF++M++++ TW+ M+ + G+ + + LF MQ+EG+
Sbjct: 370 TAIVDLYSKCGSLKQATFVFNRMKDRNVITWTAMLVGLAQNGHAEDALRLFAQMQEEGIA 429
Query: 225 VNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLI 284
N + +S++ CA L SL GR +H L R F D+ + L+ MY KCG++ + I
Sbjct: 430 ANSVTFVSLVHSCAHLGSLKRGRSIHGHLFRLGFAFDIVNMTALVDMYAKCGKINLAERI 489
Query: 285 FDNFA-SKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGK 343
F + + SKD+V+WNS+I+GY +G G +++ ++H+M G+ P+ T + +LSACS++
Sbjct: 490 FSHGSISKDVVLWNSMITGYGMHGHGYQAVGIYHKMIEEGLKPNQTTFLSLLSACSHSRL 549
Query: 344 VKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
V++G +F SM+ + + P +HYAC+VDLL RAG+ E+A LIE MPF+P + +LL
Sbjct: 550 VEQGISLFNSMERDHNIRPIEKHYACLVDLLSRAGRFEEAQALIEKMPFQPGTAVLEALL 609
Query: 404 GACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIK 463
CRTH ++L + KLL L+ N G YI+LSNIYA R+ V +R MR R + K
Sbjct: 610 SGCRTHKNINLGIQTSDKLLALDAMNPGIYIMLSNIYAEARRWDKVDYIRGLMRNRGLKK 669
Query: 464 PPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEE 523
PG S +E VH F D SHP I LE + + +GY PD+S VL DVDEE
Sbjct: 670 TPGYSLVETGNWVHTFFAGD-NSHPNWEEIYHFLESLRSAVETSGYVPDTSCVLRDVDEE 728
Query: 524 EKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDA 583
KV L HSE+LA+A+GL+ P G IR+ KNLRVCGDCH+ K ISK++ REII+RDA
Sbjct: 729 MKVRMLWGHSERLAIAFGLLTTPAGSLIRITKNLRVCGDCHTVTKYISKIVKREIIVRDA 788
Query: 584 NRFHHFKDGLCSCRDYW 600
NRFHHF +G CSC DYW
Sbjct: 789 NRFHHFSNGECSCGDYW 805
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 98/417 (23%), Positives = 199/417 (47%), Gaps = 20/417 (4%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNV----VSWTVMLGGFIRDSRIDDARRLFDMMPE 65
AM+ GY++ G E LF M +N+ S T L + + E
Sbjct: 99 NAMLCGYLQSGRYRETLELFGLMRSRNLEVDSCSCTFALKACASSLDYEMGMEIISSAVE 158
Query: 66 KDV----VAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKL 121
K + ++M+ + G++ E + +FD MP K+V+ W ++I GYV DVA +L
Sbjct: 159 KGMEKNRFVGSSMISFLVKFGKIGEAQRVFDGMPNKDVVCWNSIIGGYVQAGCFDVAFQL 218
Query: 122 FEVMP----EKNEVSWTAML-----MGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLG 172
F M + + ++ T+++ +G + G+ + L + ++ S +
Sbjct: 219 FFEMHGSGIKPSPITMTSLIQACGGIGNLKLGKCMHGYVLGLGLG-NDILVLTSFVDMYS 277
Query: 173 QNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLIS 232
+ G+++ AR VF +M ++ +W+ MI R G E DLF + + + +++S
Sbjct: 278 KMGDIESARWVFYKMPTRNLVSWNAMISGCVRNGLVGESFDLFHRLVRSSGGFDLTTIVS 337
Query: 233 VLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKD 292
+L C+ ASL G+ +H +R F+ ++ +++ ++ +Y KCG L + +F+ ++
Sbjct: 338 LLQGCSQTASLATGKILHGCAIR-SFESNLILSTAIVDLYSKCGSLKQATFVFNRMKDRN 396
Query: 293 IVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFE 352
++ W +++ G AQ G E +L++F +M G+ + VT V ++ +C++ G +K GR I
Sbjct: 397 VITWTAMLVGLAQNGHAEDALRLFAQMQEEGIAANSVTFVSLVHSCAHLGSLKRGRSIHG 456
Query: 353 SMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTH 409
+ + + +VD+ + G++ A ++ D ++W S++ H
Sbjct: 457 HL-FRLGFAFDIVNMTALVDMYAKCGKINLAERIFSHGSISKDVVLWNSMITGYGMH 512
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 86/350 (24%), Positives = 157/350 (44%), Gaps = 21/350 (6%)
Query: 67 DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMP 126
D T +V Y ++ R +FD+ + + M+ GY+ + R +LF +M
Sbjct: 63 DQFVATKLVKAYSDLRSLEAARYVFDQFFQPKGLLCNAMLCGYLQSGRYRETLELFGLMR 122
Query: 127 EKN-EVSWTAMLMGYTQCGRIQD--------AWELFKAMPMKSVVASNSMILGLGQNGEV 177
+N EV + C D + + K M V S SMI L + G++
Sbjct: 123 SRNLEVDSCSCTFALKACASSLDYEMGMEIISSAVEKGMEKNRFVGS-SMISFLVKFGKI 181
Query: 178 QKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVC 237
+A+ VFD M KD W+ +I Y + G LF M G++ + ++ S++ C
Sbjct: 182 GEAQRVFDGMPNKDVVCWNSIIGGYVQAGCFDVAFQLFFEMHGSGIKPSPITMTSLIQAC 241
Query: 238 ASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWN 297
+ +L G+ +H ++ D+ V + + MY K G++ + +F ++++V WN
Sbjct: 242 GGIGNLKLGKCMHGYVLGLGLGNDILVLTSFVDMYSKMGDIESARWVFYKMPTRNLVSWN 301
Query: 298 SIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREI----FES 353
++ISG + GL +S +FH + S D T+V +L CS T + G+ + S
Sbjct: 302 AMISGCVRNGLVGESFDLFHRLVRSSGGFDLTTIVSLLQGCSQTASLATGKILHGCAIRS 361
Query: 354 MKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
+S ++ +VDL + G ++ A + M + + I W ++L
Sbjct: 362 FESNLILS------TAIVDLYSKCGSLKQATFVFNRMK-DRNVITWTAML 404
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 115/236 (48%), Gaps = 12/236 (5%)
Query: 176 EVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLS 235
++ AR VFDQ + + M+ Y + G E ++LF LM+ + V+ S L
Sbjct: 79 SLEAARYVFDQFFQPKGLLCNAMLCGYLQSGRYRETLELFGLMRSRNLEVDSCSCTFALK 138
Query: 236 VCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVM 295
CAS + G ++ + V + + +V S +I+ +K G++ + + +FD +KD+V
Sbjct: 139 ACASSLDYEMGMEIISSAVEKGMEKNRFVGSSMISFLVKFGKIGEAQRVFDGMPNKDVVC 198
Query: 296 WNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFE--- 352
WNSII GY Q G + + ++F EM SG+ P +T+ ++ AC G +K G+ +
Sbjct: 199 WNSIIGGYVQAGCFDVAFQLFFEMHGSGIKPSPITMTSLIQACGGIGNLKLGKCMHGYVL 258
Query: 353 --SMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGAC 406
+ + LV VD+ + G +E A + MP + + W +++ C
Sbjct: 259 GLGLGNDILV------LTSFVDMYSKMGDIESARWVFYKMP-TRNLVSWNAMISGC 307
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 76/159 (47%), Gaps = 2/159 (1%)
Query: 247 RQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQY 306
+ HAQ++ D +VA+ L+ Y L + +FD F ++ N+++ GY Q
Sbjct: 49 KSTHAQIITNSLSTDQFVATKLVKAYSDLRSLEAARYVFDQFFQPKGLLCNAMLCGYLQS 108
Query: 307 GLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEH 366
G ++L++F M S + D + L AC+ + + G EI S K + E
Sbjct: 109 GRYRETLELFGLMRSRNLEVDSCSCTFALKACASSLDYEMGMEIISSAVEKGM-EKNRFV 167
Query: 367 YACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
+ M+ L + G++ +A ++ + MP D + W S++G
Sbjct: 168 GSSMISFLVKFGKIGEAQRVFDGMP-NKDVVCWNSIIGG 205
>gi|356518183|ref|XP_003527761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Glycine max]
Length = 1582
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 239/639 (37%), Positives = 360/639 (56%), Gaps = 53/639 (8%)
Query: 12 MVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF------DMMPE 65
++ YV+ G ++ A T+FWQM E ++VSW M+ G + + +F ++P+
Sbjct: 947 LINMYVKTGSVSRARTVFWQMNEVDLVSWNTMISGCALSGLEECSVGMFVDLLRGGLLPD 1006
Query: 66 KDVVAQ----------------------------------TNMVLGYCQDGRVDEGREIF 91
+ VA T ++ Y + G+++E +F
Sbjct: 1007 QFTVASVLRACSSLGGGCHLATQIHACAMKAGVVLDSFVSTTLIDVYSKSGKMEEAEFLF 1066
Query: 92 DEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEK----------NEVSWTAMLMGYT 141
++ SW M+ GY+ + A +L+ +M E N L+G
Sbjct: 1067 VNQDGFDLASWNAMMHGYIVSGDFPKALRLYILMQESGERANQITLANAAKAAGGLVGLK 1126
Query: 142 QCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKV 201
Q +IQ A + + + V S + + L + GE++ AR +F+++ DD W+ MI
Sbjct: 1127 QGKQIQ-AVVVKRGFNLDLFVISGVLDMYL-KCGEMESARRIFNEIPSPDDVAWTTMISG 1184
Query: 202 YERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVD 261
G E + + M+ V+ + + +++ C+ L +L+ GRQ+HA V+ D
Sbjct: 1185 CVENGQEEHALFTYHHMRLSKVQPDEYTFATLVKACSLLTALEQGRQIHANTVKLNCAFD 1244
Query: 262 VYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFS 321
+V + L+ MY KCG + + +F + I WN++I G AQ+G E++L+ F EM S
Sbjct: 1245 PFVMTSLVDMYAKCGNIEDARGLFKRTNTSRIASWNAMIVGLAQHGNAEEALQFFEEMKS 1304
Query: 322 SGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVE 381
GV PD VT +GVLSACS++G V E E F SM+ Y +EP+ EHY+C+VD L RAG++
Sbjct: 1305 RGVTPDRVTFIGVLSACSHSGLVSEAYENFYSMQKIYGIEPEIEHYSCLVDALSRAGRIR 1364
Query: 382 DAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYA 441
+A K+I +MPFE A ++ +LL ACR + + + A+KLL LEP ++ Y+LLSN+YA
Sbjct: 1365 EAEKVISSMPFEASASMYRTLLNACRVQVDRETGKRVAEKLLALEPSDSAAYVLLSNVYA 1424
Query: 442 SQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIG 501
+ ++ +VA R MRK NV K PG SW++++ KVH+F D SH E +I +E I
Sbjct: 1425 AANQWENVASARNMMRKANVKKDPGFSWVDLKNKVHLFVAGD-RSHEETDVIYNKVEYIM 1483
Query: 502 GLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCG 561
+RE GY PD+ F L DV+EE+K SL YHSEKLA+AYGL+K P +RV+KNLRVCG
Sbjct: 1484 KRIREEGYLPDTDFALVDVEEEDKECSLYYHSEKLAIAYGLMKTPPSTTLRVIKNLRVCG 1543
Query: 562 DCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
DCH+AIK ISKV RE++LRDANRFHHF+ G+CSC DYW
Sbjct: 1544 DCHNAIKYISKVFEREVVLRDANRFHHFRSGVCSCGDYW 1582
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 100/401 (24%), Positives = 176/401 (43%), Gaps = 34/401 (8%)
Query: 12 MVRGYVEEGMITEAGTLFWQMPE--KNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVV 69
++ Y + G ++ A LF P+ +++V+W +L +R D LF ++ V
Sbjct: 667 LITMYSKCGSLSSARKLFDTTPDTSRDLVTWNAILSAHADKAR--DGFHLFRLLRRSFVS 724
Query: 70 AQTNM---VLGYCQDGRVDEGREIFDEMPKKNVISWTTMISG-----YVNNNRIDVARKL 121
A + V C E K + W ++G Y RI AR L
Sbjct: 725 ATRHTLAPVFKMCLLSASPSAAESLHGYAVKIGLQWDVFVAGALVNIYAKFGRIREARVL 784
Query: 122 FEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKAR 181
F+ M ++ V W M+ Y G +A LF + + + L + + K
Sbjct: 785 FDGMGLRDVVLWNVMMKAYVDTGLEYEALLLFSEFNRTGLRPDDVTLCTLARVVK-SKQN 843
Query: 182 VVFDQMRE-----------------KDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVR 224
V+ Q+++ D W+ + + ++G E +D F M V
Sbjct: 844 VLEWQLKQLKAYGTKLFMYDDDDDGSDVIAWNKTLSWFLQRGETWEAVDCFVDMINSRVA 903
Query: 225 VNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLI 284
+ + + +LSV A L L+ G+Q+H +VR D V V + LI MY+K G + + + +
Sbjct: 904 CDGLTFVVMLSVVAGLNCLELGKQIHGIVVRSGLDQVVSVGNCLINMYVKTGSVSRARTV 963
Query: 285 FDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSAC-SYTGK 343
F D+V WN++ISG A GL E S+ +F ++ G++PD T+ VL AC S G
Sbjct: 964 FWQMNEVDLVSWNTMISGCALSGLEECSVGMFVDLLRGGLLPDQFTVASVLRACSSLGGG 1023
Query: 344 VKEGREIFE-SMKSKYLVEPKTEHYACMVDLLGRAGQVEDA 383
+I +MK+ +++ ++D+ ++G++E+A
Sbjct: 1024 CHLATQIHACAMKAGVVLDSFVS--TTLIDVYSKSGKMEEA 1062
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 105/438 (23%), Positives = 181/438 (41%), Gaps = 79/438 (18%)
Query: 38 VSWTVMLGG-----FIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFD 92
+ W V + G + + RI +AR LFD M +DVV M+ Y G E +F
Sbjct: 758 LQWDVFVAGALVNIYAKFGRIREARVLFDGMGLRDVVLWNVMMKAYVDTGLEYEALLLFS 817
Query: 93 EM--------------------PKKNVISWT-TMISGYVNNNRIDVARKLF---EVMPEK 128
E K+NV+ W + Y KLF +
Sbjct: 818 EFNRTGLRPDDVTLCTLARVVKSKQNVLEWQLKQLKAY--------GTKLFMYDDDDDGS 869
Query: 129 NEVSWTAMLMGYTQCGRIQDAWELFKAM-------------PMKSVVAS----------- 164
+ ++W L + Q G +A + F M M SVVA
Sbjct: 870 DVIAWNKTLSWFLQRGETWEAVDCFVDMINSRVACDGLTFVVMLSVVAGLNCLELGKQIH 929
Query: 165 ---------------NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYEL 209
N +I + G V +AR VF QM E D +W+ MI G E
Sbjct: 930 GIVVRSGLDQVVSVGNCLINMYVKTGSVSRARTVFWQMNEVDLVSWNTMISGCALSGLEE 989
Query: 210 EVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDH-GRQVHAQLVRCQFDVDVYVASVL 268
+ +F + + G+ + ++ SVL C+SL H Q+HA ++ +D +V++ L
Sbjct: 990 CSVGMFVDLLRGGLLPDQFTVASVLRACSSLGGGCHLATQIHACAMKAGVVLDSFVSTTL 1049
Query: 269 ITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDD 328
I +Y K G++ + + +F N D+ WN+++ GY G K+L+++ M SG +
Sbjct: 1050 IDVYSKSGKMEEAEFLFVNQDGFDLASWNAMMHGYIVSGDFPKALRLYILMQESGERANQ 1109
Query: 329 VTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIE 388
+TL A +K+G++I +++ K + ++D+ + G++E A ++
Sbjct: 1110 ITLANAAKAAGGLVGLKQGKQI-QAVVVKRGFNLDLFVISGVLDMYLKCGEMESARRIFN 1168
Query: 389 AMPFEPDAIIWGSLLGAC 406
+P PD + W +++ C
Sbjct: 1169 EIP-SPDDVAWTTMISGC 1185
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 118/271 (43%), Gaps = 59/271 (21%)
Query: 5 NVVSWTAMVRGYVEEG----------MITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRID 54
++ SW AM+ GY+ G ++ E+G Q+ N L G + +I
Sbjct: 1073 DLASWNAMMHGYIVSGDFPKALRLYILMQESGERANQITLANAAKAAGGLVGLKQGKQIQ 1132
Query: 55 D--ARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+R F++ D+ + ++ Y + G ++ R IF+E+P + ++WTTMISG V N
Sbjct: 1133 AVVVKRGFNL----DLFVISGVLDMYLKCGEMESARRIFNEIPSPDDVAWTTMISGCVEN 1188
Query: 113 NRIDVA------RKLFEVMPEKNEVS--------WTAMLMG------------------- 139
+ + A +L +V P++ + TA+ G
Sbjct: 1189 GQEEHALFTYHHMRLSKVQPDEYTFATLVKACSLLTALEQGRQIHANTVKLNCAFDPFVM 1248
Query: 140 ------YTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREK--- 190
Y +CG I+DA LFK + + N+MI+GL Q+G ++A F++M+ +
Sbjct: 1249 TSLVDMYAKCGNIEDARGLFKRTNTSRIASWNAMIVGLAQHGNAEEALQFFEEMKSRGVT 1308
Query: 191 -DDATWSGMIKVYERKGYELEVIDLFTLMQK 220
D T+ G++ G E + F MQK
Sbjct: 1309 PDRVTFIGVLSACSHSGLVSEAYENFYSMQK 1339
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 75/368 (20%), Positives = 154/368 (41%), Gaps = 55/368 (14%)
Query: 58 RLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMP--KKNVISWTTMISGYVNNNR- 114
R+ D N++ Y + G + R++FD P +++++W ++S + + R
Sbjct: 651 RILTSGHHPDRFLTNNLITMYSKCGSLSSARKLFDTTPDTSRDLVTWNAILSAHADKARD 710
Query: 115 ------------IDVARK----LFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPM 158
+ R +F++ S L GY +I W++F A +
Sbjct: 711 GFHLFRLLRRSFVSATRHTLAPVFKMCLLSASPSAAESLHGYAV--KIGLQWDVFVAGAL 768
Query: 159 KSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLM 218
++ A + G +++ARV+FD M +D W+ M+K Y G E E + LF+
Sbjct: 769 VNIYA---------KFGRIREARVLFDGMGLRDVVLWNVMMKAYVDTGLEYEALLLFSEF 819
Query: 219 QKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGEL 278
+ G+R + +L ++ V S ++ + QL + + Y + + G
Sbjct: 820 NRTGLRPDDVTLCTLARVVKSKQNV-----LEWQLKQLK----AYGTKLFMYDDDDDG-- 868
Query: 279 VKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSAC 338
D++ WN +S + Q G +++ F +M +S V D +T V +LS
Sbjct: 869 ------------SDVIAWNKTLSWFLQRGETWEAVDCFVDMINSRVACDGLTFVVMLSVV 916
Query: 339 SYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAII 398
+ ++ G++I + + ++ C++++ + G V A + M E D +
Sbjct: 917 AGLNCLELGKQI-HGIVVRSGLDQVVSVGNCLINMYVKTGSVSRARTVFWQMN-EVDLVS 974
Query: 399 WGSLLGAC 406
W +++ C
Sbjct: 975 WNTMISGC 982
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 80/182 (43%), Gaps = 6/182 (3%)
Query: 226 NFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIF 285
+ P S+L + + L G++ HA+++ D ++ + LITMY KCG L + +F
Sbjct: 625 SIPQWFSILRHAIAASDLPLGKRAHARILTSGHHPDRFLTNNLITMYSKCGSLSSARKLF 684
Query: 286 DNF--ASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGK 343
D S+D+V WN+I+S +A +F + S V TL V C +
Sbjct: 685 DTTPDTSRDLVTWNAILSAHADK--ARDGFHLFRLLRRSFVSATRHTLAPVFKMCLLSAS 742
Query: 344 VKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
E K ++ +V++ + G++ +A L + M D ++W ++
Sbjct: 743 -PSAAESLHGYAVKIGLQWDVFVAGALVNIYAKFGRIREARVLFDGMGLR-DVVLWNVMM 800
Query: 404 GA 405
A
Sbjct: 801 KA 802
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 60/281 (21%), Positives = 108/281 (38%), Gaps = 62/281 (22%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM------PEK------------------- 35
+P + V+WT M+ G VE G A + M P++
Sbjct: 1170 IPSPDDVAWTTMISGCVENGQEEHALFTYHHMRLSKVQPDEYTFATLVKACSLLTALEQG 1229
Query: 36 -----NVVSWTVMLGGFIRDSRID---------DARRLFDMMPEKDVVAQTNMVLGYCQD 81
N V F+ S +D DAR LF + + M++G Q
Sbjct: 1230 RQIHANTVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTSRIASWNAMIVGLAQH 1289
Query: 82 GRVDEGREIFDEMPKKNV----ISWTTMISGYVNNNRIDVA-------RKLFEVMPEKNE 130
G +E + F+EM + V +++ ++S ++ + A +K++ + PE
Sbjct: 1290 GNAEEALQFFEEMKSRGVTPDRVTFIGVLSACSHSGLVSEAYENFYSMQKIYGIEPEIEH 1349
Query: 131 VSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREK 190
++ ++ ++ GRI++A ++ +MP + AS SM L VQ R ++ EK
Sbjct: 1350 --YSCLVDALSRAGRIREAEKVISSMPFE---ASASMYRTLLNACRVQVDRETGKRVAEK 1404
Query: 191 -------DDATWSGMIKVYERKGYELEVIDLFTLMQKEGVR 224
D A + + VY V +M+K V+
Sbjct: 1405 LLALEPSDSAAYVLLSNVYAAANQWENVASARNMMRKANVK 1445
>gi|15232837|ref|NP_186850.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75193830|sp|Q9S7F4.1|PP206_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At2g01510
gi|6091739|gb|AAF03451.1|AC010797_27 hypothetical protein [Arabidopsis thaliana]
gi|6513930|gb|AAF14834.1|AC011664_16 hypothetical protein [Arabidopsis thaliana]
gi|332640228|gb|AEE73749.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 825
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 225/621 (36%), Positives = 362/621 (58%), Gaps = 26/621 (4%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIR------DSRID 54
+PE++ V++ ++ GY ++G+ TE+ LF +M + G ++ D +
Sbjct: 210 IPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALG 269
Query: 55 DARRLFDMMP--EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+ +D ++ Y + RV E R +FDEMP+ + +S+ +IS Y
Sbjct: 270 QQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQA 329
Query: 113 NRIDVARKLFEVMP----EKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMI 168
++ + + F M ++ + ML +Q + + + ++++A+ I
Sbjct: 330 DQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQ----MGRQLHCQALLATADSI 385
Query: 169 LGLGQN--------GEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQK 220
L +G + ++A ++F + ++ +W+ +I Y +KG + LFT M+
Sbjct: 386 LHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRG 445
Query: 221 EGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVK 280
+R + + +VL AS ASL G+Q+HA ++R +V+ S L+ MY KCG +
Sbjct: 446 SNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKD 505
Query: 281 GKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSY 340
+F+ ++ V WN++IS +A G GE ++ F +M SG+ PD V+++GVL+ACS+
Sbjct: 506 AVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSH 565
Query: 341 TGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWG 400
G V++G E F++M Y + PK +HYACM+DLLGR G+ +A KL++ MPFEPD I+W
Sbjct: 566 CGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWS 625
Query: 401 SLLGACRTHMKLDLAEVAAKKLLQLEP-KNAGPYILLSNIYASQGRFHDVAELRKNMRKR 459
S+L ACR H LAE AA+KL +E ++A Y+ +SNIYA+ G + V +++K MR+R
Sbjct: 626 SVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRER 685
Query: 460 NVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHD 519
+ K P SW+EV K+H+F+ D +HP I+R + ++ + GY PD+S V+ D
Sbjct: 686 GIKKVPAYSWVEVNHKIHVFSSND-QTHPNGDEIVRKINELTAEIEREGYKPDTSSVVQD 744
Query: 520 VDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREII 579
VDE+ K+ SL+YHSE+LAVA+ L+ PEG PI VMKNLR C DCH+AIKLISK++ REI
Sbjct: 745 VDEQMKIESLKYHSERLAVAFALISTPEGCPIVVMKNLRACRDCHAAIKLISKIVKREIT 804
Query: 580 LRDANRFHHFKDGLCSCRDYW 600
+RD +RFHHF +G+CSC DYW
Sbjct: 805 VRDTSRFHHFSEGVCSCGDYW 825
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 129/460 (28%), Positives = 218/460 (47%), Gaps = 61/460 (13%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MP +N VS M+ G+V+ G ++ A LF MP++ VV+WT+++G + R+S D+A +LF
Sbjct: 74 MPHKNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLF 133
Query: 61 DMMPEK------DVVAQTNMVLGYCQDGRVDEG---------REIFDEMPKKNVISWTTM 105
M D V T ++ G C D + FD P V + +
Sbjct: 134 RQMCRSSSCTLPDHVTFTTLLPG-CNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSN--VL 190
Query: 106 ISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMP-------- 157
+ Y R+D+A LFE +PEK+ V++ ++ GY + G ++ LF M
Sbjct: 191 LKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSD 250
Query: 158 ------MKSVVASNSMILG-------------------------LGQNGEVQKARVVFDQ 186
+K+VV + LG ++ V + R++FD+
Sbjct: 251 FTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDE 310
Query: 187 MREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGV-RVNFPSLISVLSVCASLASLDH 245
M E D +++ +I Y + + F MQ G R NFP ++LS+ A+L+SL
Sbjct: 311 MPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFP-FATMLSIAANLSSLQM 369
Query: 246 GRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQ 305
GRQ+H Q + D ++V + L+ MY KC + +LIF + + V W ++ISGY Q
Sbjct: 370 GRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQ 429
Query: 306 YGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTE 365
GL LK+F +M S + D T VL A + + G+++ + +E
Sbjct: 430 KGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLE-NVF 488
Query: 366 HYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
+ +VD+ + G ++DA+++ E MP + +A+ W +L+ A
Sbjct: 489 SGSGLVDMYAKCGSIKDAVQVFEEMP-DRNAVSWNALISA 527
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 98/373 (26%), Positives = 177/373 (47%), Gaps = 20/373 (5%)
Query: 47 FIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMI 106
+R ++ AR+++D MP K+ V+ M+ G+ + G V R++FD MP + V++WT ++
Sbjct: 58 LLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILM 117
Query: 107 SGYVNNNRIDVARKLFEVMPEK------NEVSWTAMLMGYTQC------GRIQD-AWEL- 152
Y N+ D A KLF M + V++T +L G G++ A +L
Sbjct: 118 GWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLG 177
Query: 153 FKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVI 212
F P +V SN ++ + + A V+F+++ EKD T++ +I YE+ G E I
Sbjct: 178 FDTNPFLTV--SNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESI 235
Query: 213 DLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMY 272
LF M++ G + + + VL L G+Q+HA V F D V + ++ Y
Sbjct: 236 HLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFY 295
Query: 273 IKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLV 332
K +++ +++FD D V +N +IS Y+Q E SL F EM G +
Sbjct: 296 SKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFA 355
Query: 333 GVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYA-CMVDLLGRAGQVEDAMKLIEAMP 391
+LS + ++ GR++ ++ H +VD+ + E+A + +++P
Sbjct: 356 TMLSIAANLSSLQMGRQL--HCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLP 413
Query: 392 FEPDAIIWGSLLG 404
+ + W +L+
Sbjct: 414 -QRTTVSWTALIS 425
>gi|224091821|ref|XP_002309359.1| predicted protein [Populus trichocarpa]
gi|222855335|gb|EEE92882.1| predicted protein [Populus trichocarpa]
Length = 605
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 234/606 (38%), Positives = 357/606 (58%), Gaps = 49/606 (8%)
Query: 43 MLGGFIRDSRIDDARRLF-DMM----PEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKK 97
M+ GF+++S +D+ R+F DM+ P D+ ++ + + G +I K
Sbjct: 1 MISGFVKNSCFEDSIRVFGDMVLGNGPRFDLTTVIAVLPAVAELQELKLGMQILCLAIKC 60
Query: 98 NVISWTTMISGYVN----NNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELF 153
S ++++G ++ +++AR LF + +K+ +S AM+ G+T G +D+ LF
Sbjct: 61 GFYSHVSLLTGLISLFSKCGEVEIARLLFGEIRKKDLISCNAMISGFTCNGETEDSVRLF 120
Query: 154 KAMPMKSVVASNSMILGL-------GQN-------------------------------- 174
K + S+S I+GL G +
Sbjct: 121 KELLSSGERVSSSTIVGLIPVYSPFGHSYLCNCIHGFCVKLGIVSHSSVSTALTTVYCRL 180
Query: 175 GEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVL 234
E+ AR +FD+ EK A+W+ MI + G I LF MQK V N ++ S+L
Sbjct: 181 NEMIFARQLFDESAEKTLASWNAMISGCTQNGLTDAAISLFQTMQKNNVNPNPVTVTSIL 240
Query: 235 SVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIV 294
S CA + +L G VH+ + +F+ +VYV++ LI MY KCG + + +FD K+ V
Sbjct: 241 SACAQIGALSLGEWVHSLIKSNRFESNVYVSTALIDMYAKCGSITVARELFDLMPEKNEV 300
Query: 295 MWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESM 354
WN++ISGY +G G+++LK+F++M SS V P +T + VL ACS+ G VKEG IF +M
Sbjct: 301 TWNAMISGYGLHGHGQEALKLFYDMLSSSVKPTGLTFLSVLYACSHAGLVKEGDGIFHTM 360
Query: 355 KSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDL 414
+ EP EHYACMVD+LGRAGQ++ A++ I+AMP EP +WG+LLGAC H +L
Sbjct: 361 VHDFGFEPLAEHYACMVDILGRAGQLKKALEFIKAMPVEPGPPVWGALLGACMIHKDTNL 420
Query: 415 AEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEK 474
A VA++KL +L+P+N G Y+L+SNIY+ + ++ A +R+ +K+ + K PGC+ IE+ +
Sbjct: 421 AHVASEKLFELDPENIGYYVLMSNIYSVERKYPQAASVRQVAKKKRLAKTPGCTLIEIGQ 480
Query: 475 KVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSE 534
H+FT D SHP+ I L+K+ G + EAG+ +++ VLHD++EEEK +++ HSE
Sbjct: 481 VPHVFTSGD-QSHPQSKAIYAELDKLTGKMTEAGFQTETTTVLHDLEEEEKELTMKVHSE 539
Query: 535 KLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLC 594
KLA+A+GL+ G IR++KNLRVC DCH+ K +SK+ R I++RDANRFHHFKDGLC
Sbjct: 540 KLAIAFGLISTEPGAEIRIIKNLRVCLDCHNWTKFLSKITKRVIVVRDANRFHHFKDGLC 599
Query: 595 SCRDYW 600
SC DYW
Sbjct: 600 SCGDYW 605
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 128/293 (43%), Gaps = 47/293 (16%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF-DMMPEKDV 68
T ++ + + G + A LF ++ +K+++S M+ GF + +D+ RLF +++ +
Sbjct: 70 TGLISLFSKCGEVEIARLLFGEIRKKDLISCNAMISGFTCNGETEDSVRLFKELLSSGER 129
Query: 69 VAQTNMV------------------------LG--------------YCQDGRVDEGREI 90
V+ + +V LG YC+ + R++
Sbjct: 130 VSSSTIVGLIPVYSPFGHSYLCNCIHGFCVKLGIVSHSSVSTALTTVYCRLNEMIFARQL 189
Query: 91 FDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRI 146
FDE +K + SW MISG N D A LF+ M + N V+ T++L Q G +
Sbjct: 190 FDESAEKTLASWNAMISGCTQNGLTDAAISLFQTMQKNNVNPNPVTVTSILSACAQIGAL 249
Query: 147 Q-DAW--ELFKAMPMKS-VVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVY 202
W L K+ +S V S ++I + G + AR +FD M EK++ TW+ MI Y
Sbjct: 250 SLGEWVHSLIKSNRFESNVYVSTALIDMYAKCGSITVARELFDLMPEKNEVTWNAMISGY 309
Query: 203 ERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVR 255
G+ E + LF M V+ + +SVL C+ + G + +V
Sbjct: 310 GLHGHGQEALKLFYDMLSSSVKPTGLTFLSVLYACSHAGLVKEGDGIFHTMVH 362
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 98/217 (45%), Gaps = 22/217 (10%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV----VSWTVMLGGFIRDSRIDDARR 58
E+ + SW AM+ G + G+ A +LF M + NV V+ T +L + +
Sbjct: 195 EKTLASWNAMISGCTQNGLTDAAISLFQTMQKNNVNPNPVTVTSILSACAQIGALSLGEW 254
Query: 59 LFDMMP----EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNR 114
+ ++ E +V T ++ Y + G + RE+FD MP+KN ++W MISGY +
Sbjct: 255 VHSLIKSNRFESNVYVSTALIDMYAKCGSITVARELFDLMPEKNEVTWNAMISGYGLHGH 314
Query: 115 IDVARKLFEVMPEKN----EVSWTAMLMGYTQCGRIQDAWELFKAM-------PMKSVVA 163
A KLF M + +++ ++L + G +++ +F M P+ A
Sbjct: 315 GQEALKLFYDMLSSSVKPTGLTFLSVLYACSHAGLVKEGDGIFHTMVHDFGFEPLAEHYA 374
Query: 164 SNSMILGLGQNGEVQKARVVFDQMR-EKDDATWSGMI 199
M+ LG+ G+++KA M E W ++
Sbjct: 375 --CMVDILGRAGQLKKALEFIKAMPVEPGPPVWGALL 409
>gi|357118938|ref|XP_003561204.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
mitochondrial-like [Brachypodium distachyon]
Length = 618
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 202/508 (39%), Positives = 315/508 (62%), Gaps = 1/508 (0%)
Query: 4 RNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMM 63
RNVV+WTA++ GY G + EA LF +MPE+NVVSW ML + R+ DA LF+ M
Sbjct: 96 RNVVTWTALLSGYARAGRVDEAEALFGRMPERNVVSWNTMLEAYTSSGRVGDACTLFNGM 155
Query: 64 PEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFE 123
P +D + ++ + G +D+ R++FD MP++NV++WTTM++G + ++ AR LF+
Sbjct: 156 PVRDAGSWNILLAALVRSGNIDKARKLFDRMPERNVMAWTTMVAGIARSGSVNEARALFD 215
Query: 124 VMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVV 183
MPE+N VSW AM+ GY + I +A +LF MP + + + N MI G QN +++A+ +
Sbjct: 216 GMPERNVVSWNAMISGYARNHMIDEAHDLFMKMPTRDIASWNIMITGFIQNKNLERAQEL 275
Query: 184 FDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASL 243
FD+M ++ TW+ M+ Y + + LF M +G+R N + + + C++LA L
Sbjct: 276 FDKMPRRNVVTWTTMMNGYLQSIQSETALQLFNGMLIDGIRPNQVTFLGAVDACSNLAGL 335
Query: 244 DHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGY 303
G+QVH + + F D ++ S L+ +Y KCGE++ + +F+ KD++ WN +I+ Y
Sbjct: 336 SEGQQVHQMICKTPFQFDTFIESTLMNLYAKCGEIILARKVFNLSKEKDVISWNGMIAAY 395
Query: 304 AQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPK 363
A +G+G +++ ++ +M +G P+DVT VG+LSACS++G V EG IFE M + +
Sbjct: 396 AHHGVGLEAIHLYEKMQENGYKPNDVTYVGLLSACSHSGLVDEGLRIFEYMVKDRSIAVR 455
Query: 364 TEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLL 423
EHY C++DL RAG++ DA +LI + EP + +W +LLG C +H + ++AA+ LL
Sbjct: 456 DEHYTCLIDLCSRAGRLGDAKRLIHFLKVEPSSTVWNALLGGCNSHGNESIGDLAARNLL 515
Query: 424 QLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRD 483
+ EP NAG Y LL NIYAS G++ + A++R M R + K PGCSWIEV KVH+F RD
Sbjct: 516 EAEPNNAGTYTLLCNIYASAGKWKEAAKIRSEMNDRGLKKQPGCSWIEVANKVHVFVSRD 575
Query: 484 CVSHPEHPMIMRMLEKIGGLLREAGYCP 511
SH E +I +L+ I ++R A P
Sbjct: 576 -KSHSESDLINSLLQDIHDIMRMADTVP 602
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 112/359 (31%), Positives = 192/359 (53%), Gaps = 11/359 (3%)
Query: 52 RIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEM-PKKNVISWTTMISGYV 110
R+ DARRLFD P++DVV+ T +V Y G + + R +FD ++NV++WT ++SGY
Sbjct: 50 RVSDARRLFDRTPDRDVVSWTALVAAYACQGMLHDARALFDRPDARRNVVTWTALLSGYA 109
Query: 111 NNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILG 170
R+D A LF MPE+N VSW ML YT GR+ DA LF MP++ + N ++
Sbjct: 110 RAGRVDEAEALFGRMPERNVVSWNTMLEAYTSSGRVGDACTLFNGMPVRDAGSWNILLAA 169
Query: 171 LGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSL 230
L ++G + KAR +FD+M E++ W+ M+ R G E LF M + N S
Sbjct: 170 LVRSGNIDKARKLFDRMPERNVMAWTTMVAGIARSGSVNEARALFDGMPER----NVVSW 225
Query: 231 ISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFAS 290
+++S A +D + ++ D+ +++IT +I+ L + + +FD
Sbjct: 226 NAMISGYARNHMIDEAHDLFMKMP----TRDIASWNIMITGFIQNKNLERAQELFDKMPR 281
Query: 291 KDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREI 350
+++V W ++++GY Q E +L++F+ M G+ P+ VT +G + ACS + EG+++
Sbjct: 282 RNVVTWTTMMNGYLQSIQSETALQLFNGMLIDGIRPNQVTFLGAVDACSNLAGLSEGQQV 341
Query: 351 FESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTH 409
+ M K + T + +++L + G++ A K+ + E D I W ++ A H
Sbjct: 342 HQ-MICKTPFQFDTFIESTLMNLYAKCGEIILARKVFN-LSKEKDVISWNGMIAAYAHH 398
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 133/502 (26%), Positives = 227/502 (45%), Gaps = 108/502 (21%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLF----------W-------------------- 30
MPERNVVSW M+ Y G + +A TLF W
Sbjct: 124 MPERNVVSWNTMLEAYTSSGRVGDACTLFNGMPVRDAGSWNILLAALVRSGNIDKARKLF 183
Query: 31 -QMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGRE 89
+MPE+NV++WT M+ G R +++AR LFD MPE++VV+ M+ GY ++ +DE +
Sbjct: 184 DRMPERNVMAWTTMVAGIARSGSVNEARALFDGMPERNVVSWNAMISGYARNHMIDEAHD 243
Query: 90 IFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDA 149
+F +MP +++ SW MI+G++ N ++ A++LF+ MP +N V+WT M+ GY Q + + A
Sbjct: 244 LFMKMPTRDIASWNIMITGFIQNKNLERAQELFDKMPRRNVVTWTTMMNGYLQSIQSETA 303
Query: 150 WELFKAMPMKSVVASNSMILGL------------GQN----------------------- 174
+LF M + + + LG GQ
Sbjct: 304 LQLFNGMLIDGIRPNQVTFLGAVDACSNLAGLSEGQQVHQMICKTPFQFDTFIESTLMNL 363
Query: 175 ----GEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSL 230
GE+ AR VF+ +EKD +W+GMI Y G LE I L+ MQ+ G + N +
Sbjct: 364 YAKCGEIILARKVFNLSKEKDVISWNGMIAAYAHHGVGLEAIHLYEKMQENGYKPNDVTY 423
Query: 231 ISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVA----SVLITMYIKCGELVKGK-LIF 285
+ +LS C+ +D G ++ +V+ D + V + LI + + G L K LI
Sbjct: 424 VGLLSACSHSGLVDEGLRIFEYMVK---DRSIAVRDEHYTCLIDLCSRAGRLGDAKRLIH 480
Query: 286 DNFASKDIVMWNSIISGYAQYG---LGEKSLKVFHEMFSSGVMPDDVTLVGVL-SACSYT 341
+WN+++ G +G +G+ + + E P++ +L + +
Sbjct: 481 FLKVEPSSTVWNALLGGCNSHGNESIGDLAARNLLE-----AEPNNAGTYTLLCNIYASA 535
Query: 342 GKVKEGREIFESMKSK-------------------YLVEPKTEHYACMVDLLGRAGQVED 382
GK KE +I M + ++ K+ + +++ L + + D
Sbjct: 536 GKWKEAAKIRSEMNDRGLKKQPGCSWIEVANKVHVFVSRDKSHSESDLINSLLQ--DIHD 593
Query: 383 AMKLIEAMPFEPDAIIWGSLLG 404
M++ + +P + +I G L+G
Sbjct: 594 IMRMADTVPRDHTQLIDGELVG 615
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/328 (18%), Positives = 130/328 (39%), Gaps = 68/328 (20%)
Query: 165 NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVR 224
N + L G V AR +FD+ ++D +W+ ++ Y +G + D L + R
Sbjct: 39 NRRVAELAAAGRVSDARRLFDRTPDRDVVSWTALVAAYACQGM---LHDARALFDRPDAR 95
Query: 225 VNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLI 284
N V + L++ Y + G + + + +
Sbjct: 96 RN-----------------------------------VVTWTALLSGYARAGRVDEAEAL 120
Query: 285 FDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKV 344
F +++V WN+++ Y G + +F+ M + D + +L+A +G +
Sbjct: 121 FGRMPERNVVSWNTMLEAYTSSGRVGDACTLFNGM----PVRDAGSWNILLAALVRSGNI 176
Query: 345 KEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL- 403
+ R++F+ M + ++ + MV + R+G V +A L + MP E + + W +++
Sbjct: 177 DKARKLFDRMPERNVMA-----WTTMVAGIARSGSVNEARALFDGMP-ERNVVSWNAMIS 230
Query: 404 GACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIK 463
G R HM + A +++ ++ + ++ + EL M +RNV+
Sbjct: 231 GYARNHM----IDEAHDLFMKMPTRDIASWNIMITGFIQNKNLERAQELFDKMPRRNVV- 285
Query: 464 PPGCSW----------IEVEKKVHMFTG 481
+W I+ E + +F G
Sbjct: 286 ----TWTTMMNGYLQSIQSETALQLFNG 309
>gi|297739711|emb|CBI29893.3| unnamed protein product [Vitis vinifera]
Length = 784
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 223/524 (42%), Positives = 325/524 (62%), Gaps = 42/524 (8%)
Query: 118 ARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMK--------------SVVA 163
AR++ + MPE+N VSWTAM+ GY+Q G +A LF M M S +
Sbjct: 64 ARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTS 123
Query: 164 SNSMILG-------------------------LGQNGEVQKARVVFDQMREKDDATWSGM 198
S+ LG + G++ +AR VFD + E+D + + +
Sbjct: 124 SSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAI 183
Query: 199 IKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQF 258
I Y + G + E +DLF +Q+EG+R N+ + SVL+ + LA+LDHGRQVH+ ++R +
Sbjct: 184 ISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKL 243
Query: 259 DVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHE 318
V + + LI MY KCG L + IFD+ + ++ WN+++ GY+++GLG +++++F
Sbjct: 244 PFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKL 303
Query: 319 MFSSG-VMPDDVTLVGVLSACSYTGKVKEGREIF-ESMKSKYLVEPKTEHYACMVDLLGR 376
M V PD VT + VLS CS+ G G EIF E + K EP+ EHY C+VDL GR
Sbjct: 304 MKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGR 363
Query: 377 AGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILL 436
AG+VE+A + I+ MPFEP A IWGSLLGACR H + + E A++LL++E +NAG Y++L
Sbjct: 364 AGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHQNVHIGEFVARRLLEIESENAGNYVIL 423
Query: 437 SNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRM 496
SN+YAS GR+ DV +R+ M+++ VIK PG SWIE+++ +H F D SHP +
Sbjct: 424 SNLYASAGRWDDVRTVRELMKEKAVIKEPGRSWIELDQTLHTFHASD-RSHPRKEEVFAK 482
Query: 497 LEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKN 556
+ ++ ++EAGY P+ S VL+DVD+E+K L+ HSEKLA+A+GL+ P G P+R++KN
Sbjct: 483 VRELSIKIKEAGYVPELSCVLYDVDDEQKEKILQGHSEKLALAFGLICTPGGTPVRIIKN 542
Query: 557 LRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
LR+C DCH+ K +S+V GRE+ LRD NRFHH G CSC DYW
Sbjct: 543 LRICVDCHNFAKFLSRVYGREVSLRDKNRFHHIVGGTCSCGDYW 586
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/326 (26%), Positives = 165/326 (50%), Gaps = 32/326 (9%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM----PEKNVVSWTVMLGGFIRDSRIDDA 56
MPERNVVSWTAM+ GY + G +EA LF +M N ++ +L S
Sbjct: 71 MPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLG 130
Query: 57 RRLFDMMP----EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGY--- 109
R++ ++ E + ++++ Y + G++ E R +FD +P+++V+S T +ISGY
Sbjct: 131 RQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQL 190
Query: 110 -VNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQC-----GRIQDAWELFKAMPMKSVVA 163
++ +D+ R+L N V++ ++L + GR + L +P VV
Sbjct: 191 GLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFY-VVL 249
Query: 164 SNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEG- 222
NS+I + G + +R +FD M E+ +W+ M+ Y + G E ++LF LM++E
Sbjct: 250 QNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENK 309
Query: 223 VRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQ--FDVDVYVASVLITMYIKCG---- 276
V+ + + ++VLS C+ D G ++ ++V + F+ ++ ++ ++ + G
Sbjct: 310 VKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEE 369
Query: 277 --ELVKGKLIFDNFASKDIVMWNSII 300
E +K K+ F+ A+ +W S++
Sbjct: 370 AFEFIK-KMPFEPTAA----IWGSLL 390
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 99/174 (56%), Gaps = 1/174 (0%)
Query: 218 MQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGE 277
M +G+ V F SVL+ C S ++ G++VHA +++ ++ VY+ + LI +Y KC
Sbjct: 1 MGIQGLEVEFQGYDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRC 60
Query: 278 LVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSA 337
L + + D +++V W ++ISGY+Q G ++L +F EM SG P++ T VL++
Sbjct: 61 LGDARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTS 120
Query: 338 CSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMP 391
C+ + + GR+I S+ K E + ++D+ +AG++ +A ++ + +P
Sbjct: 121 CTSSSGFQLGRQI-HSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLP 173
>gi|297849104|ref|XP_002892433.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338275|gb|EFH68692.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 741
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 239/648 (36%), Positives = 371/648 (57%), Gaps = 52/648 (8%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPE----KNVVSWTVMLGGFIRDSRIDDARR 58
E N++ W M RG+ A L+ M N ++ +L + + ++
Sbjct: 96 EPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQ 155
Query: 59 L----FDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNR 114
+ + + D+ T+++ Y Q+GR+++ R++FD P ++V+S+T +I GY +
Sbjct: 156 IHGHVLKLGYDLDLFVHTSLISVYVQNGRLEDARKVFDRSPHRDVVSYTALIKGYASRGY 215
Query: 115 IDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAM----------PMKSVVA- 163
I+ A+KLF+ +P K+ VSW AM+ GY + G ++A ELFK M M +VV+
Sbjct: 216 IESAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKEMMKTNIRPDESTMVTVVSA 275
Query: 164 ---SNSMILG-----------LGQN--------------GEVQKARVVFDQMREKDDATW 195
S S+ LG G N GE++ A +F+ + KD +W
Sbjct: 276 CAQSGSIELGRQVHSWIDDHGFGSNLKIVNSLMDLYSKCGELETACGLFEGLLYKDVISW 335
Query: 196 SGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVR 255
+ +I Y E + LF M + G R N +++S+L CA L ++D GR +H + +
Sbjct: 336 NTLIGGYTHMNLYKEALLLFQEMLRSGERPNDVTMLSILPACAHLGAIDIGRWIHVYIDK 395
Query: 256 CQFDVDVYVASV---LITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKS 312
+ +S+ LI MY KCG++ +F++ K + WN++I G+A +G + +
Sbjct: 396 -RLKSATNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADAA 454
Query: 313 LKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVD 372
+F M G+ PDD+T VG+LSACS +G + GR IF +M Y + PK EHY CM+D
Sbjct: 455 FDIFSRMRKIGIEPDDITFVGLLSACSRSGMLDLGRHIFRTMTQDYKITPKLEHYGCMID 514
Query: 373 LLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGP 432
LLG +G ++A ++I M EPD +IW SLL AC+ ++L E A+ L+++EP+N G
Sbjct: 515 LLGHSGLFKEAEEMINNMEMEPDGVIWCSLLKACKIRGNVELGESFAQNLIKIEPENPGC 574
Query: 433 YILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPM 492
Y+LLSNIYA+ GR+++VA++R + + + K PGCS IE++ VH F D HP +
Sbjct: 575 YVLLSNIYATAGRWNEVAKIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKF-HPRNRE 633
Query: 493 IMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIR 552
I MLE++ LL +AG+ PD+S VL +++EE K +LR+HSEKLA+A+GL+ G +
Sbjct: 634 IYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLT 693
Query: 553 VMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
++KNLRVC +CH A KLISK+ REII RD RFHHF+DG+CSC DYW
Sbjct: 694 IVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 97/435 (22%), Positives = 178/435 (40%), Gaps = 86/435 (19%)
Query: 2 PERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFD 61
P R+VVS+TA+++GY G I A LF ++P K+VVSW M+ G+ +A LF
Sbjct: 196 PHRDVVSYTALIKGYASRGYIESAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFK 255
Query: 62 MMPEKDV----VAQTNMVLGYCQDGRVDEGREI--------------------------- 90
M + ++ +V Q G ++ GR++
Sbjct: 256 EMMKTNIRPDESTMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNSLMDLYSKCG 315
Query: 91 --------FDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVM----PEKNEVSWTAMLM 138
F+ + K+VISW T+I GY + N A LF+ M N+V+ ++L
Sbjct: 316 ELETACGLFEGLLYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGERPNDVTMLSILP 375
Query: 139 GYTQCGRIQ-DAW-ELFKAMPMKSVVASNSMILGL----GQNGEVQKARVVFDQMREKDD 192
G I W ++ +KS ++S+ L + G+++ A VF+ + K
Sbjct: 376 ACAHLGAIDIGRWIHVYIDKRLKSATNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSL 435
Query: 193 ATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQ 252
++W+ MI + G D+F+ M+K G+ + + + +LS C+ LD GR +
Sbjct: 436 SSWNAMIFGFAMHGRADAAFDIFSRMRKIGIEPDDITFVGLLSACSRSGMLDLGRHIFRT 495
Query: 253 LVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKS 312
+ + D + + + +I GL +++
Sbjct: 496 MTQ------------------------------DYKITPKLEHYGCMIDLLGHSGLFKEA 525
Query: 313 LKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEH-YACMV 371
++ + M + PD V +L AC G V+ G +++ +EP+ Y +
Sbjct: 526 EEMINNM---EMEPDGVIWCSLLKACKIRGNVELGESFAQNLIK---IEPENPGCYVLLS 579
Query: 372 DLLGRAGQVEDAMKL 386
++ AG+ + K+
Sbjct: 580 NIYATAGRWNEVAKI 594
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 129/261 (49%), Gaps = 34/261 (13%)
Query: 183 VFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLAS 242
VF+ ++E + W+ M + + + + L+ M G+ N + +L CA +
Sbjct: 90 VFETIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKA 149
Query: 243 LDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSI--- 299
G+Q+H +++ +D+D++V + LI++Y++ G L + +FD +D+V + ++
Sbjct: 150 FKEGQQIHGHVLKLGYDLDLFVHTSLISVYVQNGRLEDARKVFDRSPHRDVVSYTALIKG 209
Query: 300 ----------------------------ISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTL 331
ISGYA+ G +++L++F EM + + PD+ T+
Sbjct: 210 YASRGYIESAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKEMMKTNIRPDESTM 269
Query: 332 VGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMP 391
V V+SAC+ +G ++ GR++ S + + ++DL + G++E A L E +
Sbjct: 270 VTVVSACAQSGSIELGRQV-HSWIDDHGFGSNLKIVNSLMDLYSKCGELETACGLFEGLL 328
Query: 392 FEPDAIIWGSLLGACRTHMKL 412
++ D I W +L+G THM L
Sbjct: 329 YK-DVISWNTLIGG-YTHMNL 347
>gi|302760843|ref|XP_002963844.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
gi|300169112|gb|EFJ35715.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
Length = 781
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 236/618 (38%), Positives = 368/618 (59%), Gaps = 20/618 (3%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVML----GGFIRDSRIDDA 56
+ R+VVSWTAM+ V+ A L+ +M VV + L + + + +
Sbjct: 166 LEHRDVVSWTAMIAACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPNYLSEG 225
Query: 57 RRLFDMMP----EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+ ++ ++ E DV + V + G + + R +F++M ++V++W +I+ YV N
Sbjct: 226 KFVYGLVSSGVMESDVRVMNSAVNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITLYVQN 285
Query: 113 NRIDVARKLFEVMPE----KNEVSWTAMLMGYTQCGRIQDA---WELFK--AMPMKSVVA 163
A +LF + + N++++ ML YT + EL K +VVA
Sbjct: 286 ENFGEAVRLFGRLQQDGVKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDAVVA 345
Query: 164 SNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGV 223
+ M L G+ +A +F M KD TW+ M Y + G+ E + LF MQ EG
Sbjct: 346 TALMSL-YGRCEAPGQAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGR 404
Query: 224 RVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKL 283
R +L++VL CA LA+L GRQ+H+ ++ +F +++ V + LI MY KCG++ +
Sbjct: 405 RPTSATLVAVLDTCAHLAALQKGRQIHSHIIENRFRMEMVVETALINMYGKCGKMAEAMS 464
Query: 284 IFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGK 343
+F+ A +DI++WNS++ YAQ+G +++L++F++M GV D V+ V VLSA S++G
Sbjct: 465 VFEKMAKRDILVWNSMLGAYAQHGYYDETLQLFNQMQLDGVKADAVSFVSVLSALSHSGS 524
Query: 344 VKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMP-FEPDAIIWGSL 402
V +G + F +M + + P E Y C+VDLLGRAG++++A+ ++ + PD I+W +L
Sbjct: 525 VTDGYQYFVAMLQDFSITPTPELYGCVVDLLGRAGRIQEAVDIVLKLSGCLPDGILWMTL 584
Query: 403 LGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVI 462
LGACRTH K D A+ AA+++L+ +P ++G Y++LSN+YA+ G + V +RK MR R V
Sbjct: 585 LGACRTHNKTDQAKAAAEQVLERDPSHSGAYVVLSNVYAAAGDWDGVNRMRKLMRSRGVK 644
Query: 463 KPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDE 522
K PG S IE+ +VH F D SHP I L+ + +R AGY PD+ +LHDV++
Sbjct: 645 KEPGRSSIEILNRVHEFLEGD-RSHPRRHPIYAELDVLNSEMRAAGYIPDTKMILHDVED 703
Query: 523 EEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRD 582
E K L YHSE+LA+A+GL+ P G P+RV+KNLRVC DCH+A K ISK+ GREI++RD
Sbjct: 704 ERKEDMLFYHSERLAIAFGLISTPPGTPLRVIKNLRVCSDCHTATKYISKLRGREILVRD 763
Query: 583 ANRFHHFKDGLCSCRDYW 600
+RFH+FKDG CSC+DYW
Sbjct: 764 THRFHNFKDGRCSCKDYW 781
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 116/430 (26%), Positives = 219/430 (50%), Gaps = 20/430 (4%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV----VSWTVMLGGFIRDSRIDDA 56
+ ++V +WT M+ Y ++G A +F+QM E++V V++ +L + D
Sbjct: 65 LERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESLKDG 124
Query: 57 RRLFDMMP----EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+ + E DV T ++ Y + G V + F + ++V+SWT MI+ V +
Sbjct: 125 MEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAACVQH 184
Query: 113 NRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDA---WELFKAMPMKS-VVAS 164
++ +AR L+ M N+++ + Y + + + L + M+S V
Sbjct: 185 DQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPNYLSEGKFVYGLVSSGVMESDVRVM 244
Query: 165 NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVR 224
NS + G G + AR +F+ M ++D TW+ +I +Y + E + LF +Q++GV+
Sbjct: 245 NSAVNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITLYVQNENFGEAVRLFGRLQQDGVK 304
Query: 225 VNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLI 284
N + + +L+V SL SL G+ +H + +D D VA+ L+++Y +C + I
Sbjct: 305 ANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDAVVATALMSLYGRCEAPGQAWKI 364
Query: 285 FDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKV 344
F + SKD++ W + YAQ G +++L++F EM G P TLV VL C++ +
Sbjct: 365 FVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTCAHLAAL 424
Query: 345 KEGREIFES-MKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
++GR+I +++++ +E E ++++ G+ G++ +AM + E M + D ++W S+L
Sbjct: 425 QKGRQIHSHIIENRFRMEMVVE--TALINMYGKCGKMAEAMSVFEKMA-KRDILVWNSML 481
Query: 404 GACRTHMKLD 413
GA H D
Sbjct: 482 GAYAQHGYYD 491
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 137/277 (49%), Gaps = 3/277 (1%)
Query: 167 MILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVN 226
+I Q G V +A+ VF+ + KD W+ MI +Y ++G + +F MQ+E V
Sbjct: 45 LIQMYAQCGSVPEAQQVFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPT 104
Query: 227 FPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFD 286
+ +++L+ CAS SL G ++H Q+++ F+ DV+V + LI MY KCG + F
Sbjct: 105 KVTYVAILNACASTESLKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFK 164
Query: 287 NFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKE 346
+D+V W ++I+ Q+ + ++ M GV+P+ +TL V +A + E
Sbjct: 165 RLEHRDVVSWTAMIAACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPNYLSE 224
Query: 347 GREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGAC 406
G+ ++ + S ++E V++ G AG + DA +L E M + D + W ++
Sbjct: 225 GKFVY-GLVSSGVMESDVRVMNSAVNMFGNAGLLGDARRLFEDM-VDRDVVTWNIVITLY 282
Query: 407 RTHMKLDLAEVAAKKLLQLEPK-NAGPYILLSNIYAS 442
+ A +L Q K N ++L+ N+Y S
Sbjct: 283 VQNENFGEAVRLFGRLQQDGVKANDITFVLMLNVYTS 319
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 86/344 (25%), Positives = 151/344 (43%), Gaps = 19/344 (5%)
Query: 71 QTNMVLG-----YCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLF--- 122
Q N+V G Y Q G V E +++F+ + +K+V +WT MI Y D A +F
Sbjct: 37 QNNLVCGHLIQMYAQCGSVPEAQQVFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQM 96
Query: 123 ---EVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKS----VVASNSMILGLGQNG 175
+VMP K V++ A+L ++D E+ + + V ++I + G
Sbjct: 97 QEEDVMPTK--VTYVAILNACASTESLKDGMEIHGQILQQGFEGDVFVGTALINMYNKCG 154
Query: 176 EVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLS 235
V+ A F ++ +D +W+ MI + L+ MQ +GV N +L +V +
Sbjct: 155 SVRGAWDSFKRLEHRDVVSWTAMIAACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFN 214
Query: 236 VCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVM 295
L G+ V+ + + DV V + + M+ G L + +F++ +D+V
Sbjct: 215 AYGDPNYLSEGKFVYGLVSSGVMESDVRVMNSAVNMFGNAGLLGDARRLFEDMVDRDVVT 274
Query: 296 WNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMK 355
WN +I+ Y Q +++++F + GV +D+T V +L+ + + +G+ I E +K
Sbjct: 275 WNIVITLYVQNENFGEAVRLFGRLQQDGVKANDITFVLMLNVYTSLTSLAKGKVIHELVK 334
Query: 356 SKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIW 399
A M L GR A K+ M D I W
Sbjct: 335 EAGYDRDAVVATALM-SLYGRCEAPGQAWKIFVDMG-SKDVITW 376
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 114/227 (50%), Gaps = 16/227 (7%)
Query: 230 LISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFA 289
+++L C+S ++DHGR+VH + F+ + V LI MY +CG + + + +F+
Sbjct: 7 FVALLQRCSSAKNVDHGRRVHWHVRDRGFEQNNLVCGHLIQMYAQCGSVPEAQQVFEILE 66
Query: 290 SKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGRE 349
KD+ W +I Y Q G +++L +F++M VMP VT V +L+AC+ T +K+G E
Sbjct: 67 RKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESLKDGME 126
Query: 350 IFESMKSKYLVEPKTEHYACMVDLLGRAGQVE---DAMKLIEAMPFEPDAIIWGSLLGAC 406
I + + E ++++ + G V D+ K +E D + W +++ AC
Sbjct: 127 IHGQILQQGF-EGDVFVGTALINMYNKCGSVRGAWDSFKRLE----HRDVVSWTAMIAAC 181
Query: 407 RTHMKLDLAEVAAKKLLQLE---PKNAGPYILLSNI----YASQGRF 446
H + LA ++ +QL+ P Y + + Y S+G+F
Sbjct: 182 VQHDQFALARWLYRR-MQLDGVVPNKITLYTVFNAYGDPNYLSEGKF 227
>gi|359481919|ref|XP_003632692.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Vitis vinifera]
Length = 1053
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 223/524 (42%), Positives = 325/524 (62%), Gaps = 42/524 (8%)
Query: 118 ARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMK--------------SVVA 163
AR++ + MPE+N VSWTAM+ GY+Q G +A LF M M S +
Sbjct: 531 ARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTS 590
Query: 164 SNSMILG-------------------------LGQNGEVQKARVVFDQMREKDDATWSGM 198
S+ LG + G++ +AR VFD + E+D + + +
Sbjct: 591 SSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAI 650
Query: 199 IKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQF 258
I Y + G + E +DLF +Q+EG+R N+ + SVL+ + LA+LDHGRQVH+ ++R +
Sbjct: 651 ISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKL 710
Query: 259 DVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHE 318
V + + LI MY KCG L + IFD+ + ++ WN+++ GY+++GLG +++++F
Sbjct: 711 PFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKL 770
Query: 319 MFSSG-VMPDDVTLVGVLSACSYTGKVKEGREIF-ESMKSKYLVEPKTEHYACMVDLLGR 376
M V PD VT + VLS CS+ G G EIF E + K EP+ EHY C+VDL GR
Sbjct: 771 MKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGR 830
Query: 377 AGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILL 436
AG+VE+A + I+ MPFEP A IWGSLLGACR H + + E A++LL++E +NAG Y++L
Sbjct: 831 AGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHQNVHIGEFVARRLLEIESENAGNYVIL 890
Query: 437 SNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRM 496
SN+YAS GR+ DV +R+ M+++ VIK PG SWIE+++ +H F D SHP +
Sbjct: 891 SNLYASAGRWDDVRTVRELMKEKAVIKEPGRSWIELDQTLHTFHASD-RSHPRKEEVFAK 949
Query: 497 LEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKN 556
+ ++ ++EAGY P+ S VL+DVD+E+K L+ HSEKLA+A+GL+ P G P+R++KN
Sbjct: 950 VRELSIKIKEAGYVPELSCVLYDVDDEQKEKILQGHSEKLALAFGLICTPGGTPVRIIKN 1009
Query: 557 LRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
LR+C DCH+ K +S+V GRE+ LRD NRFHH G CSC DYW
Sbjct: 1010 LRICVDCHNFAKFLSRVYGREVSLRDKNRFHHIVGGTCSCGDYW 1053
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 87/326 (26%), Positives = 165/326 (50%), Gaps = 32/326 (9%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM----PEKNVVSWTVMLGGFIRDSRIDDA 56
MPERNVVSWTAM+ GY + G +EA LF +M N ++ +L S
Sbjct: 538 MPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLG 597
Query: 57 RRLFDMMP----EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGY--- 109
R++ ++ E + ++++ Y + G++ E R +FD +P+++V+S T +ISGY
Sbjct: 598 RQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQL 657
Query: 110 -VNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQC-----GRIQDAWELFKAMPMKSVVA 163
++ +D+ R+L N V++ ++L + GR + L +P VV
Sbjct: 658 GLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFY-VVL 716
Query: 164 SNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEG- 222
NS+I + G + +R +FD M E+ +W+ M+ Y + G E ++LF LM++E
Sbjct: 717 QNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENK 776
Query: 223 VRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQ--FDVDVYVASVLITMYIKCG---- 276
V+ + + ++VLS C+ D G ++ ++V + F+ ++ ++ ++ + G
Sbjct: 777 VKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEE 836
Query: 277 --ELVKGKLIFDNFASKDIVMWNSII 300
E +K K+ F+ A+ +W S++
Sbjct: 837 AFEFIK-KMPFEPTAA----IWGSLL 857
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 99/174 (56%), Gaps = 1/174 (0%)
Query: 218 MQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGE 277
M +G+ V F SVL+ C S ++ G++VHA +++ ++ VY+ + LI +Y KC
Sbjct: 468 MGIQGLEVEFQGYDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRC 527
Query: 278 LVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSA 337
L + + D +++V W ++ISGY+Q G ++L +F EM SG P++ T VL++
Sbjct: 528 LGDARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTS 587
Query: 338 CSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMP 391
C+ + + GR+I S+ K E + ++D+ +AG++ +A ++ + +P
Sbjct: 588 CTSSSGFQLGRQI-HSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLP 640
>gi|15222566|ref|NP_173907.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75172213|sp|Q9FRI5.1|PPR57_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g25360
gi|11067273|gb|AAG28801.1|AC079374_4 hypothetical protein [Arabidopsis thaliana]
gi|332192491|gb|AEE30612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 790
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 219/589 (37%), Positives = 354/589 (60%), Gaps = 10/589 (1%)
Query: 21 MITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEK-DVVAQTNMVLGYC 79
++ A +F ++ EK+ SWT M+ G++++ D L + M + +VA M+ GY
Sbjct: 203 LLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYV 262
Query: 80 QDGRVDEGREIFDEMPKKNV----ISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSW-- 133
G E E+ M + ++ ++I + + +++ + + + S+
Sbjct: 263 NRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFHF 322
Query: 134 -TAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDD 192
+++ Y +CG+ +A +F+ MP K +V+ N+++ G +G + +A+++F +M+EK+
Sbjct: 323 DNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNI 382
Query: 193 ATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQ 252
+W MI G+ E + LF+ M++EG + + CA L + +G+Q HAQ
Sbjct: 383 LSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQ 442
Query: 253 LVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKS 312
L++ FD + + LITMY KCG + + + +F D V WN++I+ Q+G G ++
Sbjct: 443 LLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEA 502
Query: 313 LKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVD 372
+ V+ EM G+ PD +TL+ VL+ACS+ G V +GR+ F+SM++ Y + P +HYA ++D
Sbjct: 503 VDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLID 562
Query: 373 LLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGP 432
LL R+G+ DA +IE++PF+P A IW +LL CR H ++L +AA KL L P++ G
Sbjct: 563 LLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGT 622
Query: 433 YILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPM 492
Y+LLSN++A+ G++ +VA +RK MR R V K CSWIE+E +VH F D SHPE
Sbjct: 623 YMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDD-TSHPEAEA 681
Query: 493 IMRMLEKIGGLLREAGYCPDSSFVLHDVDEE-EKVHSLRYHSEKLAVAYGLVKLPEGVPI 551
+ L+ +G +R GY PD+SFVLHDV+ + K L HSEK+AVA+GL+KLP G I
Sbjct: 682 VYIYLQDLGKEMRRLGYVPDTSFVLHDVESDGHKEDMLTTHSEKIAVAFGLMKLPPGTTI 741
Query: 552 RVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
R+ KNLR CGDCH+ + +S V+ R+IILRD RFHHF++G CSC ++W
Sbjct: 742 RIFKNLRTCGDCHNFFRFLSWVVQRDIILRDRKRFHHFRNGECSCGNFW 790
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 108/441 (24%), Positives = 196/441 (44%), Gaps = 81/441 (18%)
Query: 47 FIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMP--KKNVISWTT 104
+ + S ++ AR+LFD + E D +A+T MV GYC G + R +F++ P ++ + +
Sbjct: 59 YCKSSELNYARQLFDEISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNA 118
Query: 105 MISGYVNNNRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKS 160
MI+G+ +NN A LF M + + ++ ++L G + F A +KS
Sbjct: 119 MITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKS 178
Query: 161 -----VVASNSMILGLGQNGE----VQKARVVFDQMREKDDATWSGMIKVYERKGY---- 207
SN+++ + + AR VFD++ EKD+ +W+ M+ Y + GY
Sbjct: 179 GAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLG 238
Query: 208 -EL---------------------------EVIDLFTLMQKEGVRVNFPSLISVLSVCAS 239
EL E +++ M G+ ++ + SV+ CA+
Sbjct: 239 EELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACAT 298
Query: 240 LASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSI 299
L G+QVHA ++R + D + + L+++Y KCG+ + + IF+ +KD+V WN++
Sbjct: 299 AGLLQLGKQVHAYVLRRE-DFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNAL 357
Query: 300 ISGY-------------------------------AQYGLGEKSLKVFHEMFSSGVMPDD 328
+SGY A+ G GE+ LK+F M G P D
Sbjct: 358 LSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCD 417
Query: 329 VTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIE 388
G + +C+ G G++ + + K + ++ + + G VE+A ++
Sbjct: 418 YAFSGAIKSCAVLGAYCNGQQ-YHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFR 476
Query: 389 AMPFEPDAIIWGSLLGACRTH 409
MP D++ W +L+ A H
Sbjct: 477 TMPC-LDSVSWNALIAALGQH 496
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 101/438 (23%), Positives = 192/438 (43%), Gaps = 87/438 (19%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEK-NVVSWTVMLGGFIRDSRIDDA----R 57
E++ SWT M+ GYV+ G L M + +V++ M+ G++ +A R
Sbjct: 216 EKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVR 275
Query: 58 RLFDMMPEKDVVAQTNMV----------LG------------------------YCQDGR 83
R+ E D +++ LG Y + G+
Sbjct: 276 RMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFHFDNSLVSLYYKCGK 335
Query: 84 VDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQC 143
DE R IF++MP K+++SW ++SGYV++ I A+ +F+ M EKN +SW M+ G +
Sbjct: 336 FDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAEN 395
Query: 144 GRIQDAWELFKAMPMK---------------------------------------SVVAS 164
G ++ +LF M + S+ A
Sbjct: 396 GFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAG 455
Query: 165 NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVR 224
N++I + G V++AR VF M D +W+ +I + G+ E +D++ M K+G+R
Sbjct: 456 NALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIR 515
Query: 225 VNFPSLISVLSVCASLASLDHGRQVHAQL---VRCQFDVDVYVASVLITMYIKCGELVKG 281
+ +L++VL+ C+ +D GR+ + R D Y + LI + + G+
Sbjct: 516 PDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHY--ARLIDLLCRSGKFSDA 573
Query: 282 KLIFDNFASKDIV-MWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPD-DVTLVGVLSACS 339
+ + ++ K +W +++SG +G E + ++F G++P+ D T + + + +
Sbjct: 574 ESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLF--GLIPEHDGTYMLLSNMHA 631
Query: 340 YTGKVKEGREIFESMKSK 357
TG+ +E + + M+ +
Sbjct: 632 ATGQWEEVARVRKLMRDR 649
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/329 (25%), Positives = 164/329 (49%), Gaps = 29/329 (8%)
Query: 91 FDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAW 150
F P+ ++++ +I Y ++ ++ AR+LF+ + E ++++ T M+ GY G I A
Sbjct: 43 FGFQPRAHILN--RLIDVYCKSSELNYARQLFDEISEPDKIARTTMVSGYCASGDITLAR 100
Query: 151 ELFKAMP--MKSVVASNSMILGLGQNGEVQKARVVFDQMREK----DDATW----SGMIK 200
+F+ P M+ V N+MI G N + A +F +M+ + D+ T+ +G+
Sbjct: 101 GVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLAL 160
Query: 201 VYERKGYELEVIDLFTLMQKEG---VRVNFPSLISVLSVCASLASLDH-GRQVHAQLVRC 256
V + E + + K G + +L+SV S CAS SL H R+V +++
Sbjct: 161 VADD---EKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEIL-- 215
Query: 257 QFDVDVYVASVLITMYIKCGELVKGKLIFDNFASK-DIVMWNSIISGYAQYGLGEKSLKV 315
+ D + ++T Y+K G G+ + + +V +N++ISGY G +++L++
Sbjct: 216 --EKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEM 273
Query: 316 FHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHY-ACMVDLL 374
M SSG+ D+ T V+ AC+ G ++ G+++ + + E + H+ +V L
Sbjct: 274 VRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRR---EDFSFHFDNSLVSLY 330
Query: 375 GRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
+ G+ ++A + E MP D + W +LL
Sbjct: 331 YKCGKFDEARAIFEKMP-AKDLVSWNALL 358
Score = 45.8 bits (107), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 55/139 (39%), Gaps = 35/139 (25%)
Query: 234 LSVCASL--ASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFAS- 290
L +C L SL R VH ++ F ++ + LI +Y K EL + +FD +
Sbjct: 19 LRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEP 78
Query: 291 --------------------------------KDIVMWNSIISGYAQYGLGEKSLKVFHE 318
+D VM+N++I+G++ G ++ +F +
Sbjct: 79 DKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCK 138
Query: 319 MFSSGVMPDDVTLVGVLSA 337
M G PD+ T VL+
Sbjct: 139 MKHEGFKPDNFTFASVLAG 157
>gi|302816499|ref|XP_002989928.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
gi|300142239|gb|EFJ08941.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
Length = 818
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 234/652 (35%), Positives = 369/652 (56%), Gaps = 53/652 (8%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMP---EKNVVSWTVMLGGFIRDSRIDDAR 57
+ R+ SW A++ + + G + A +F +M + N ++ ++ GF + + R
Sbjct: 168 LQTRDETSWNAVILAHSQSGDWSGALRIFKEMKCDMKPNSTTYINVISGFSTPEVLPEGR 227
Query: 58 RLFDMMP----EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNN 113
++ + + D+V T ++ Y + G E RE+FD+M K++++SW MI YV N
Sbjct: 228 KIHAEIVANGFDSDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVQNG 287
Query: 114 RIDVARKLFEVMP----EKNEVSW-----------------------------------T 134
A +L++ + ++ + ++ T
Sbjct: 288 DFHEALELYQKLDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVAT 347
Query: 135 AMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNG---EVQKARVVFDQMREKD 191
A++ Y +CG +++A ++F AM + VA +++I NG + +KAR VFD++ +D
Sbjct: 348 ALVNMYAKCGSLEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRD 407
Query: 192 DATWSGMIKVYERKGYELEVIDLFTLMQ-KEGVRVNFPSLISVLSVCASLASLDHGRQVH 250
W+ MI Y + G + + +F M G++ + + I+VL CASL L + +H
Sbjct: 408 TICWNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALH 467
Query: 251 AQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGE 310
AQ+ + + +V V + LI MY +CG L + + +F K +V W ++++ ++QYG
Sbjct: 468 AQISESELESNVVVTNTLINMYARCGSLEEAERLFAAAKEKTVVSWTAMVAAFSQYGRYA 527
Query: 311 KSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACM 370
++L +F EM GV PDDVT +L C++ G +++G F M + + P +H+A M
Sbjct: 528 EALDLFQEMDLEGVKPDDVTYTSILFVCTHGGSLEQGWRYFTDMAELHGLAPTADHFAAM 587
Query: 371 VDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNA 430
VDLLGR+G++ DA +L+E+MPFEPD + W + L ACR H KL+L E AA+++ +L+P +
Sbjct: 588 VDLLGRSGRLFDAKELLESMPFEPDPVAWMTFLTACRIHGKLELGEAAAERVYELDPSST 647
Query: 431 GPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEH 490
PYI +SNIYA+ G + VA +RK M +R + K PG S+IEV+ K+H F+ HP
Sbjct: 648 APYIAMSNIYAAHGMWEKVASVRKKMEERGLKKLPGLSFIEVDGKLHEFSSGG-KYHPRT 706
Query: 491 PMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLV-KLPEGV 549
I L ++ GL+R AGY PD+ VLHDV E EK L YHSEK+A+A+GLV G
Sbjct: 707 DEICEELTRLHGLMRAAGYVPDTKAVLHDVSEGEKETMLLYHSEKMAIAFGLVSSRGSGE 766
Query: 550 PIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHF-KDGLCSCRDYW 600
PIRV+KNLRVC DCH+A K I+++ GR+IILRD NRFH F DG CSC DYW
Sbjct: 767 PIRVVKNLRVCSDCHTATKFIARIAGRDIILRDCNRFHRFSSDGKCSCGDYW 818
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 99/418 (23%), Positives = 201/418 (48%), Gaps = 16/418 (3%)
Query: 65 EKDVVAQTNMVLGYCQDGRVDEGREIFDEMP--KKNVISWTTMISGYVNNNRIDVARKLF 122
E+D + ++ Y + + + R +F+ M ++NV+SW MI+ Y N A L+
Sbjct: 39 ERDTMVGNALISMYGKCDSLVDARSVFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLY 98
Query: 123 EVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVA----SNSMILGLGQN 174
M + + V++ ++L C + E+ + + + +N+++ +
Sbjct: 99 WRMNLQGLGTDHVTFVSVL---GACSSLAQGREIHNRVFYSGLDSFQSLANALVTMYARF 155
Query: 175 GEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVL 234
G V A+ +F ++ +D+ +W+ +I + + G + +F M+ + ++ N + I+V+
Sbjct: 156 GSVGDAKRMFQSLQTRDETSWNAVILAHSQSGDWSGALRIFKEMKCD-MKPNSTTYINVI 214
Query: 235 SVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIV 294
S ++ L GR++HA++V FD D+ VA+ LI MY KCG + + +FD +D+V
Sbjct: 215 SGFSTPEVLPEGRKIHAEIVANGFDSDLVVATALINMYGKCGSSHEAREVFDKMKKRDMV 274
Query: 295 MWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESM 354
WN +I Y Q G ++L+++ ++ G T V +L ACS + +GR + +
Sbjct: 275 SWNVMIGCYVQNGDFHEALELYQKLDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHI 334
Query: 355 KSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDL 414
+ L + + +V++ + G +E+A K+ AM DA+ W +L+GA ++
Sbjct: 335 LERGL-DSEVAVATALVNMYAKCGSLEEARKVFNAMK-NRDAVAWSTLIGAYASNGYGKD 392
Query: 415 AEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEV 472
A A K +L ++ + + Y G ++ + M +KP ++I V
Sbjct: 393 ARKARKVFDRLGSRDTICWNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAV 450
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 96/177 (54%), Gaps = 7/177 (3%)
Query: 229 SLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFD-- 286
+ ++VL C+S + GR +H ++ +F+ D V + LI+MY KC LV + +F+
Sbjct: 9 TFLTVLCSCSSCGDVAEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARSVFESM 68
Query: 287 NFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKE 346
++ +++V WN++I+ YAQ G ++L ++ M G+ D VT V VL ACS + +
Sbjct: 69 DWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACS---SLAQ 125
Query: 347 GREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
GREI + L ++ A +V + R G V DA ++ +++ D W +++
Sbjct: 126 GREIHNRVFYSGLDSFQSLANA-LVTMYARFGSVGDAKRMFQSLQTR-DETSWNAVI 180
Score = 42.7 bits (99), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Query: 326 PDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMK 385
PD+VT + VL +CS G V EGR + E ++ E T ++ + G+ + DA
Sbjct: 5 PDNVTFLTVLCSCSSCGDVAEGRALHERIRCSRF-ERDTMVGNALISMYGKCDSLVDARS 63
Query: 386 LIEAMPF-EPDAIIWGSLLGA 405
+ E+M + + + + W +++ A
Sbjct: 64 VFESMDWRQRNVVSWNAMIAA 84
>gi|297804280|ref|XP_002870024.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315860|gb|EFH46283.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 871
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 236/618 (38%), Positives = 362/618 (58%), Gaps = 20/618 (3%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM----PEKNVVSWTVMLGGFIRDSRIDDA 56
M ER+V+SW +++ GYV G+ + ++F QM E ++ + + G DSR+
Sbjct: 256 MTERDVISWNSIINGYVSNGLAEKGLSVFVQMLFSGIEIDLATIVSVFAG-CADSRLISL 314
Query: 57 RRLFDMMPEKDVVAQ----TNMVLG-YCQDGRVDEGREIFDEMPKKNVISWTTMISGYVN 111
R K ++ N +L Y + G +D + +F EM ++V+S+T+MI+GY
Sbjct: 315 GRAVHCFGVKACFSREDRFCNTLLDMYSKCGDLDSAKVVFREMSGRSVVSYTSMIAGYAR 374
Query: 112 NNRIDVARKLFEVMPEKN---EVSWTAMLMGYTQCGRIQD----AWELFKAMPMK-SVVA 163
A KLFE M E+ +V ++ R+ D E K M +
Sbjct: 375 EGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARNRLLDEGKRVHEWIKENDMGFDIFV 434
Query: 164 SNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEG- 222
SN+++ + G +++A +VF +MR KD +W+ +I Y + Y E + LF L+ E
Sbjct: 435 SNALMDMYAKCGSMREAELVFSEMRVKDIISWNTVIGGYSKNCYANEALSLFNLLLVEKR 494
Query: 223 VRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGK 282
+ ++ VL CASL++ D GR++H ++R + D +VA+ L+ MY KCG L+ +
Sbjct: 495 FSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAR 554
Query: 283 LIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTG 342
L+FD+ SKD+V W +I+GY +G G++++ +F++M +G+ PD+++ V +L ACS++G
Sbjct: 555 LLFDDITSKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEPDEISFVSLLYACSHSG 614
Query: 343 KVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSL 402
V EG F M+ + +EP EHYAC+VD+L R G + A + IE MP PDA IWG+L
Sbjct: 615 LVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGNLSKAYRFIENMPIPPDATIWGAL 674
Query: 403 LGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVI 462
L CR H + LAE A+K+ +LEP+N G Y+L++NIYA ++ +V LRK + +R +
Sbjct: 675 LCGCRIHHDVKLAERVAEKVFELEPENTGYYVLMANIYAEAEKWEEVKRLRKRIGQRGLR 734
Query: 463 KPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDE 522
K PGCSWIE++ +V++F D S+PE I L + + E GY P + + L D +E
Sbjct: 735 KNPGCSWIEIKGRVNIFVAGDS-SNPETEKIEAFLRGVRARMIEEGYSPLTKYALIDAEE 793
Query: 523 EEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRD 582
EK +L HSEKLA+A G++ G IRV KNLRVCGDCH K +SK+ REI+LRD
Sbjct: 794 MEKEEALCGHSEKLAMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRD 853
Query: 583 ANRFHHFKDGLCSCRDYW 600
+NRFH FKDG CSCR +W
Sbjct: 854 SNRFHQFKDGHCSCRGFW 871
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 98/421 (23%), Positives = 193/421 (45%), Gaps = 24/421 (5%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLF-----WQMPEKNVVSWTVMLGGFIRDSR-IDDA 56
+R+V +R + E G + A L W + + + S + DS+ + D
Sbjct: 58 DRSVTDANTQLRRFCESGNLKNAVKLLHVSGKWDIDPRTLCSVLQLCA----DSKSLKDG 113
Query: 57 RRLFDMMPEKDVVAQTNM----VLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+ + + + V +N+ L Y G + E +FD++ + + W +++ +
Sbjct: 114 KEVDNFIRGNGFVLDSNLGSKLALMYTNCGDLKEASRVFDQVKIEKALFWNILMNELAKS 173
Query: 113 NRIDVARKLFEVM----PEKNEVSWTAMLMGYTQCGRIQDAWEL----FKAMPMKSVVAS 164
+ LF+ M E + +++ + ++ + +L K+ +
Sbjct: 174 GDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVNGGEQLHGYILKSGFGERNSVG 233
Query: 165 NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVR 224
NS++ +N V AR VFD+M E+D +W+ +I Y G + + +F M G+
Sbjct: 234 NSLVAFYLKNHRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLFSGIE 293
Query: 225 VNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLI 284
++ +++SV + CA + GR VH V+ F + + L+ MY KCG+L K++
Sbjct: 294 IDLATIVSVFAGCADSRLISLGRAVHCFGVKACFSREDRFCNTLLDMYSKCGDLDSAKVV 353
Query: 285 FDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKV 344
F + + +V + S+I+GYA+ GL +++K+F EM G+ PD T+ VL+ C+ +
Sbjct: 354 FREMSGRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARNRLL 413
Query: 345 KEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLG 404
EG+ + E +K + A M D+ + G + +A + M + D I W +++G
Sbjct: 414 DEGKRVHEWIKENDMGFDIFVSNALM-DMYAKCGSMREAELVFSEMRVK-DIISWNTVIG 471
Query: 405 A 405
Sbjct: 472 G 472
>gi|356557757|ref|XP_003547177.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Glycine max]
Length = 1227
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 239/638 (37%), Positives = 351/638 (55%), Gaps = 49/638 (7%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMM----PE 65
+++ Y + G + A LF ++ +++VVSW M+ G + + A F M
Sbjct: 592 NSLIATYFKSGEVDSAHKLFDELGDRDVVSWNSMISGCVMNGFSHSALEFFVQMLILRVG 651
Query: 66 KDVVAQTNMVLGYCQDGRVDEGREIFDEMPK----KNVISWTTMISGYVNNNRIDVARKL 121
D+ N V G + GR + + K + V+ T++ Y ++ A +
Sbjct: 652 VDLATLVNSVAACANVGSLSLGRALHGQGVKACFSREVMFNNTLLDMYSKCGNLNDAIQA 711
Query: 122 FEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSV-------------------- 161
FE M +K VSWT+++ Y + G DA LF M K V
Sbjct: 712 FEKMGQKTVVSWTSLIAAYVREGLYDDAIRLFYEMESKGVSPDVYSMTSVLHACACGNSL 771
Query: 162 ---------VASNSMILGL----------GQNGEVQKARVVFDQMREKDDATWSGMIKVY 202
+ N+M L L + G +++A +VF Q+ KD +W+ MI Y
Sbjct: 772 DKGRDVHNYIRKNNMALCLPVSNALMDMYAKCGSMEEAYLVFSQIPVKDIVSWNTMIGGY 831
Query: 203 ERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDV 262
+ E + LF MQKE R + ++ +L C SLA+L+ GR +H ++R + ++
Sbjct: 832 SKNSLPNEALKLFAEMQKES-RPDGITMACLLPACGSLAALEIGRGIHGCILRNGYSSEL 890
Query: 263 YVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSS 322
+VA+ LI MY+KCG LV +L+FD KD++ W +ISG +GLG +++ F +M +
Sbjct: 891 HVANALIDMYVKCGSLVHARLLFDMIPEKDLITWTVMISGCGMHGLGNEAIATFQKMRIA 950
Query: 323 GVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVED 382
G+ PD++T +L ACS++G + EG F SM S+ +EPK EHYACMVDLL R G +
Sbjct: 951 GIKPDEITFTSILYACSHSGLLNEGWGFFNSMISECNMEPKLEHYACMVDLLARTGNLSK 1010
Query: 383 AMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYAS 442
A LIE MP +PDA IWG+LL CR H ++LAE A+ + +LEP NAG Y+LL+NIYA
Sbjct: 1011 AYNLIETMPIKPDATIWGALLCGCRIHHDVELAEKVAEHVFELEPDNAGYYVLLANIYAE 1070
Query: 443 QGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGG 502
++ +V +LR+ + KR + K PGCSWIEV+ K F D +HP+ I +L +
Sbjct: 1071 AEKWEEVKKLRERIGKRGLKKSPGCSWIEVQGKFTTFVSAD-TAHPQAKSIFSLLNNLRI 1129
Query: 503 LLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGD 562
++ G+ P + L + + EK +L HSEKLA+A+G++ LP G IRV KNLRVC D
Sbjct: 1130 KMKNEGHSPKMRYALINAGDMEKEVALCGHSEKLAMAFGILNLPSGRTIRVAKNLRVCDD 1189
Query: 563 CHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
CH K +SK REIILRD+NRFHHFKDG CSCRD+W
Sbjct: 1190 CHEMAKFMSKTTRREIILRDSNRFHHFKDGFCSCRDFW 1227
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 95/348 (27%), Positives = 170/348 (48%), Gaps = 15/348 (4%)
Query: 69 VAQTNMVLGYCQDGRVDEGREIFDEMPKKN-VISWTTMISGYVNNNRIDVARKLFEVMPE 127
V +V Y G + EGR IFD + N V W M+S Y + LF+ M +
Sbjct: 487 VLGAKLVFMYVSCGALREGRRIFDHILSDNKVFLWNLMMSEYAKIGDYRESIYLFKKMQK 546
Query: 128 ----KNEVSWTAMLMGYTQCGRIQDAWELFKAM------PMKSVVASNSMILGLGQNGEV 177
N +++ +L + GR+ + + + +VV NS+I ++GEV
Sbjct: 547 LGITGNSYTFSCILKCFATLGRVGECKRIHGCVYKLGFGSYNTVV--NSLIATYFKSGEV 604
Query: 178 QKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVC 237
A +FD++ ++D +W+ MI G+ ++ F M V V+ +L++ ++ C
Sbjct: 605 DSAHKLFDELGDRDVVSWNSMISGCVMNGFSHSALEFFVQMLILRVGVDLATLVNSVAAC 664
Query: 238 ASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWN 297
A++ SL GR +H Q V+ F +V + L+ MY KCG L F+ K +V W
Sbjct: 665 ANVGSLSLGRALHGQGVKACFSREVMFNNTLLDMYSKCGNLNDAIQAFEKMGQKTVVSWT 724
Query: 298 SIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSK 357
S+I+ Y + GL + ++++F+EM S GV PD ++ VL AC+ + +GR++ ++
Sbjct: 725 SLIAAYVREGLYDDAIRLFYEMESKGVSPDVYSMTSVLHACACGNSLDKGRDVHNYIRKN 784
Query: 358 YLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
+ A M D+ + G +E+A + +P + D + W +++G
Sbjct: 785 NMALCLPVSNALM-DMYAKCGSMEEAYLVFSQIPVK-DIVSWNTMIGG 830
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/347 (24%), Positives = 164/347 (47%), Gaps = 21/347 (6%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEK----NVVSWTVMLGGFIRDSRIDDA 56
M ++ VVSWT+++ YV EG+ +A LF++M K +V S T +L + +D
Sbjct: 715 MGQKTVVSWTSLIAAYVREGLYDDAIRLFYEMESKGVSPDVYSMTSVLHACACGNSLDKG 774
Query: 57 RRLFDMMPEKDV---VAQTNMVLG-YCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
R + + + + ++ + +N ++ Y + G ++E +F ++P K+++SW TMI GY N
Sbjct: 775 RDVHNYIRKNNMALCLPVSNALMDMYAKCGSMEEAYLVFSQIPVKDIVSWNTMIGGYSKN 834
Query: 113 NRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMP--------MKSVVAS 164
+ + A KLF M +++ M CG + A E+ + + + +
Sbjct: 835 SLPNEALKLFAEMQKESRPDGITMACLLPACGSLA-ALEIGRGIHGCILRNGYSSELHVA 893
Query: 165 NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVR 224
N++I + G + AR++FD + EKD TW+ MI G E I F M+ G++
Sbjct: 894 NALIDMYVKCGSLVHARLLFDMIPEKDLITWTVMISGCGMHGLGNEAIATFQKMRIAGIK 953
Query: 225 VNFPSLISVLSVCASLASLDHGRQVHAQLV-RCQFDVDVYVASVLITMYIKCGELVKGKL 283
+ + S+L C+ L+ G ++ C + + + ++ + + G L K
Sbjct: 954 PDEITFTSILYACSHSGLLNEGWGFFNSMISECNMEPKLEHYACMVDLLARTGNLSKAYN 1013
Query: 284 IFDNFASK-DIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDV 329
+ + K D +W +++ G + E + KV +F + PD+
Sbjct: 1014 LIETMPIKPDATIWGALLCGCRIHHDVELAEKVAEHVFE--LEPDNA 1058
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 99/197 (50%), Gaps = 5/197 (2%)
Query: 211 VIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLIT 270
++L + QK + +N S S+L +CA L G+ VH+ + ++ + + L+
Sbjct: 437 AVELLRMSQKSELDLNAYS--SILQLCAEHKCLQEGKMVHSVISSNGIPIEGVLGAKLVF 494
Query: 271 MYIKCGELVKGKLIFDNFASKD-IVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDV 329
MY+ CG L +G+ IFD+ S + + +WN ++S YA+ G +S+ +F +M G+ +
Sbjct: 495 MYVSCGALREGRRIFDHILSDNKVFLWNLMMSEYAKIGDYRESIYLFKKMQKLGITGNSY 554
Query: 330 TLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEA 389
T +L + G+V E + I + T + ++ ++G+V+ A KL +
Sbjct: 555 TFSCILKCFATLGRVGECKRIHGCVYKLGFGSYNTVVNS-LIATYFKSGEVDSAHKLFDE 613
Query: 390 MPFEPDAIIWGSLLGAC 406
+ + D + W S++ C
Sbjct: 614 LG-DRDVVSWNSMISGC 629
>gi|242082435|ref|XP_002445986.1| hypothetical protein SORBIDRAFT_07g029130 [Sorghum bicolor]
gi|241942336|gb|EES15481.1| hypothetical protein SORBIDRAFT_07g029130 [Sorghum bicolor]
Length = 567
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 214/508 (42%), Positives = 323/508 (63%), Gaps = 4/508 (0%)
Query: 1 MPERNVVSWTAMVRGYVEEG--MITEAGTLFWQ-MPEKNVVSWTVMLGGFIRDSRIDDAR 57
MP R+VVSW A++ G + A LF + MP ++VVSW ++ G + +D A
Sbjct: 41 MPHRDVVSWNALLTALWRAGRHHLPAARRLFDEAMPSRDVVSWNSIIAGCLAHGDLDAAS 100
Query: 58 RLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDV 117
F P+++V M+ G + GR D+ +F EMPK+NV+S+TTM+ G +
Sbjct: 101 AYFAGAPKRNVATWNAMLAGLLRLGRADDADRLFGEMPKRNVVSYTTMVDGLARRGEVAR 160
Query: 118 ARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEV 177
AR++F+ MP++N VSW AM+ GY + G +A +LF+AMP K+VVA +MI + G+V
Sbjct: 161 AREVFDAMPDRNLVSWAAMISGYVENGMFVEATKLFEAMPEKNVVACTAMITSYCKQGDV 220
Query: 178 QKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVC 237
+ AR +FD +R KD +W+ MI Y G+ E + L +M +EGV+ + +LI+VL+ C
Sbjct: 221 ESARRLFDGIRAKDVISWNTMIAGYVHNGHGEEAMRLHAVMFREGVKPDHATLIAVLTAC 280
Query: 238 ASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWN 297
++LA L G+ HA ++ + + ++ L+TMY KCG + + +L+F N +KDIV WN
Sbjct: 281 SALALLRQGKSTHAIAIKAMLESGISFSNALMTMYSKCGNVGESELVFINLRTKDIVSWN 340
Query: 298 SIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSK 357
+II+ YAQ+G +K + +FHEM +G++PDD+T + VLSAC + GKV ++F+ M SK
Sbjct: 341 TIIAAYAQHGKYQKVIALFHEMEMTGLIPDDITFLSVLSACGHVGKVDASLKLFDLMSSK 400
Query: 358 YLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEV 417
Y + P+ EHYAC+VD+L RAGQ+E A I+ MP E + +WGSLLGAC+ H + L E+
Sbjct: 401 YAISPRAEHYACIVDILSRAGQLEKASSYIKDMPLEAEKNVWGSLLGACQMHGNVQLGEL 460
Query: 418 AAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVH 477
AAK L+Q + +++GPY++LSNIYA+ G + V ++R M++R V K PG SW E+ +VH
Sbjct: 461 AAKMLVQSDSESSGPYVILSNIYAAAGMWGQVNQVRGQMKERGVKKQPGYSWTEIANEVH 520
Query: 478 MFTGRDCVSHPEHPMIMRMLEKIGGLLR 505
MF G D SHPE I+ L KI +R
Sbjct: 521 MFVGGDA-SHPEMRKIISELRKISFHMR 547
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/283 (21%), Positives = 117/283 (41%), Gaps = 42/283 (14%)
Query: 155 AMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDL 214
++ + ++ N I L + G+V AR VFD M +D +W+ ++ R G +
Sbjct: 9 SLAARRLLRDNQRISALARAGDVAAARRVFDAMPHRDVVSWNALLTALWRAGRH-HLPAA 67
Query: 215 FTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHA------------------QLVRC 256
L + + S S+++ C + LD A +L R
Sbjct: 68 RRLFDEAMPSRDVVSWNSIIAGCLAHGDLDAASAYFAGAPKRNVATWNAMLAGLLRLGRA 127
Query: 257 QFDVD----------VYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQY 306
D D V + ++ + GE+ + + +FD +++V W ++ISGY +
Sbjct: 128 D-DADRLFGEMPKRNVVSYTTMVDGLARRGEVARAREVFDAMPDRNLVSWAAMISGYVEN 186
Query: 307 GLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEH 366
G+ ++ K+F M V V ++++ G V+ R +F+ +++K ++ T
Sbjct: 187 GMFVEATKLFEAMPEKNV----VACTAMITSYCKQGDVESARRLFDGIRAKDVISWNT-- 240
Query: 367 YACMVDLLGRAGQVEDAMKLIEAMPFE---PDAIIWGSLLGAC 406
M+ G E+AM+L M E PD ++L AC
Sbjct: 241 ---MIAGYVHNGHGEEAMRLHAVMFREGVKPDHATLIAVLTAC 280
>gi|356509847|ref|XP_003523656.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Glycine max]
Length = 1611
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 239/639 (37%), Positives = 361/639 (56%), Gaps = 53/639 (8%)
Query: 12 MVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGG----------------FIRDSRIDD 55
++ YV+ G ++ A ++F QM E +++SW M+ G +RDS + D
Sbjct: 976 LINMYVKAGSVSRARSVFGQMNEVDLISWNTMISGCTLSGLEECSVGMFVHLLRDSLLPD 1035
Query: 56 ARRLFDMMPE------------------------KDVVAQTNMVLGYCQDGRVDEGREIF 91
+ ++ D T ++ Y + G+++E +F
Sbjct: 1036 QFTVASVLRACSSLEGGYYLATQIHACAMKAGVVLDSFVSTALIDVYSKRGKMEEAEFLF 1095
Query: 92 DEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVS----------WTAMLMGYT 141
++ SW ++ GY+ + A +L+ +M E E S L+G
Sbjct: 1096 VNQDGFDLASWNAIMHGYIVSGDFPKALRLYILMQESGERSDQITLVNAAKAAGGLVGLK 1155
Query: 142 QCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKV 201
Q +I A + + + V S + + L + GE++ AR VF ++ DD W+ MI
Sbjct: 1156 QGKQIH-AVVVKRGFNLDLFVTSGVLDMYL-KCGEMESARRVFSEIPSPDDVAWTTMISG 1213
Query: 202 YERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVD 261
G E + + M+ V+ + + +++ C+ L +L+ GRQ+HA +V+ D
Sbjct: 1214 CVENGQEEHALFTYHQMRLSKVQPDEYTFATLVKACSLLTALEQGRQIHANIVKLNCAFD 1273
Query: 262 VYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFS 321
+V + L+ MY KCG + + +F ++ I WN++I G AQ+G +++L+ F M S
Sbjct: 1274 PFVMTSLVDMYAKCGNIEDARGLFKRTNTRRIASWNAMIVGLAQHGNAKEALQFFKYMKS 1333
Query: 322 SGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVE 381
GVMPD VT +GVLSACS++G V E E F SM+ Y +EP+ EHY+C+VD L RAG++E
Sbjct: 1334 RGVMPDRVTFIGVLSACSHSGLVSEAYENFYSMQKNYGIEPEIEHYSCLVDALSRAGRIE 1393
Query: 382 DAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYA 441
+A K+I +MPFE A ++ +LL ACR + + + A+KLL LEP ++ Y+LLSN+YA
Sbjct: 1394 EAEKVISSMPFEASASMYRTLLNACRVQVDRETGKRVAEKLLALEPSDSAAYVLLSNVYA 1453
Query: 442 SQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIG 501
+ ++ +VA R MRK NV K PG SW++++ KVH+F D SH E +I +E I
Sbjct: 1454 AANQWENVASARNMMRKVNVKKDPGFSWVDLKNKVHLFVAGD-RSHEETDVIYNKVEYIM 1512
Query: 502 GLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCG 561
+RE GY PD+ F L DV+EE+K SL YHSEKLA+AYGL+K P +RV+KNLRVCG
Sbjct: 1513 KRIREEGYVPDTDFALVDVEEEDKECSLYYHSEKLAIAYGLMKTPPSTTLRVIKNLRVCG 1572
Query: 562 DCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
DCHSAIK ISKV REI+LRDANRFHHF++G+CSC DYW
Sbjct: 1573 DCHSAIKYISKVFKREIVLRDANRFHHFRNGICSCGDYW 1611
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 113/480 (23%), Positives = 195/480 (40%), Gaps = 94/480 (19%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDD----- 55
M R+VV W M++ YV+ + EA LF + V L R +
Sbjct: 821 MAVRDVVLWNVMMKAYVDTCLEYEAMLLFSEFHRTGFRPDDVTLRTLSRVVKCKKNILEL 880
Query: 56 ------ARRLFDMMPE-KDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNV-------IS 101
A +LF + DV+ + + Q G E + F +M V +
Sbjct: 881 KQFKAYATKLFMYDDDGSDVIVWNKALSRFLQRGEAWEAVDCFVDMINSRVACDGLTFVV 940
Query: 102 WTTMISG--------------------------------YVNNNRIDVARKLFEVMPEKN 129
T+++G YV + AR +F M E +
Sbjct: 941 MLTVVAGLNCLELGKQIHGIVMRSGLDQVVSVGNCLINMYVKAGSVSRARSVFGQMNEVD 1000
Query: 130 EVSWTAMLMGYT--------------------------------QCGRIQDAWEL---FK 154
+SW M+ G T C ++ + L
Sbjct: 1001 LISWNTMISGCTLSGLEECSVGMFVHLLRDSLLPDQFTVASVLRACSSLEGGYYLATQIH 1060
Query: 155 AMPMKSVV-----ASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYEL 209
A MK+ V S ++I + G++++A +F D A+W+ ++ Y G
Sbjct: 1061 ACAMKAGVVLDSFVSTALIDVYSKRGKMEEAEFLFVNQDGFDLASWNAIMHGYIVSGDFP 1120
Query: 210 EVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLI 269
+ + L+ LMQ+ G R + +L++ L L G+Q+HA +V+ F++D++V S ++
Sbjct: 1121 KALRLYILMQESGERSDQITLVNAAKAAGGLVGLKQGKQIHAVVVKRGFNLDLFVTSGVL 1180
Query: 270 TMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDV 329
MY+KCGE+ + +F S D V W ++ISG + G E +L +H+M S V PD+
Sbjct: 1181 DMYLKCGEMESARRVFSEIPSPDDVAWTTMISGCVENGQEEHALFTYHQMRLSKVQPDEY 1240
Query: 330 TLVGVLSACSYTGKVKEGREIFESM-KSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIE 388
T ++ ACS +++GR+I ++ K +P +VD+ + G +EDA L +
Sbjct: 1241 TFATLVKACSLLTALEQGRQIHANIVKLNCAFDPFV--MTSLVDMYAKCGNIEDARGLFK 1298
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 100/409 (24%), Positives = 173/409 (42%), Gaps = 33/409 (8%)
Query: 2 PERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKN--VVSWTVMLGGFIRDS-RIDDARR 58
P+R V + ++ Y + G ++ A LF P+ N +V+W +L + + D
Sbjct: 689 PDRFVTN--NLITMYAKCGSLSSARKLFDTTPDTNRDLVTWNAILSALAAHADKSHDGFH 746
Query: 59 LFDMMPEKDVVAQTNMVLG----YCQDGRVDEGREIFDEMPKKNVISWTTMISG-----Y 109
LF ++ + VV+ T L C E K + W ++G Y
Sbjct: 747 LFRLL-RRSVVSTTRHTLAPVFKMCLLSASPSASESLHGYAVKIGLQWDVFVAGALVNIY 805
Query: 110 VNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAM------------- 156
I AR LF+ M ++ V W M+ Y +A LF
Sbjct: 806 AKFGLIREARVLFDGMAVRDVVLWNVMMKAYVDTCLEYEAMLLFSEFHRTGFRPDDVTLR 865
Query: 157 PMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFT 216
+ VV IL L Q ++D D W+ + + ++G E +D F
Sbjct: 866 TLSRVVKCKKNILELKQFKAYATKLFMYDD-DGSDVIVWNKALSRFLQRGEAWEAVDCFV 924
Query: 217 LMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCG 276
M V + + + +L+V A L L+ G+Q+H ++R D V V + LI MY+K G
Sbjct: 925 DMINSRVACDGLTFVVMLTVVAGLNCLELGKQIHGIVMRSGLDQVVSVGNCLINMYVKAG 984
Query: 277 ELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLS 336
+ + + +F D++ WN++ISG GL E S+ +F + ++PD T+ VL
Sbjct: 985 SVSRARSVFGQMNEVDLISWNTMISGCTLSGLEECSVGMFVHLLRDSLLPDQFTVASVLR 1044
Query: 337 AC-SYTGKVKEGREIFE-SMKSKYLVEPKTEHYACMVDLLGRAGQVEDA 383
AC S G +I +MK+ +++ ++D+ + G++E+A
Sbjct: 1045 ACSSLEGGYYLATQIHACAMKAGVVLDSFVS--TALIDVYSKRGKMEEA 1091
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 82/185 (44%), Gaps = 9/185 (4%)
Query: 226 NFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIF 285
+ P S+L + + L G++ HA+++ D +V + LITMY KCG L + +F
Sbjct: 655 SLPQCFSILRQAIAASDLSLGKRAHARILTSGHHPDRFVTNNLITMYAKCGSLSSARKLF 714
Query: 286 DNF--ASKDIVMWNSIISGYAQYGLGEKSLKVFH---EMFSSGVMPDDVTLVGVLSACSY 340
D ++D+V WN+I+S A + +KS FH + S V TL V C
Sbjct: 715 DTTPDTNRDLVTWNAILSALAAH--ADKSHDGFHLFRLLRRSVVSTTRHTLAPVFKMCLL 772
Query: 341 TGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWG 400
+ E K ++ +V++ + G + +A L + M D ++W
Sbjct: 773 SAS-PSASESLHGYAVKIGLQWDVFVAGALVNIYAKFGLIREARVLFDGMAVR-DVVLWN 830
Query: 401 SLLGA 405
++ A
Sbjct: 831 VMMKA 835
>gi|224077074|ref|XP_002305120.1| predicted protein [Populus trichocarpa]
gi|222848084|gb|EEE85631.1| predicted protein [Populus trichocarpa]
Length = 786
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 236/645 (36%), Positives = 368/645 (57%), Gaps = 48/645 (7%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDM 62
+ + S A+V Y + G++ +A ++F ++ + ++VSW ++ G + A L
Sbjct: 143 DSDAFSANALVDMYAKVGILEDASSVFDEIAKPDIVSWNAIIAGCVLHEYHHRALELLRE 202
Query: 63 MPEKDVVAQT---NMVLGYCQDGRVDE-GREIFDEMPKKNVIS----WTTMISGYVNNNR 114
M + + + L C + E GR++ + K ++ S +I Y N
Sbjct: 203 MNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSLIKMDMGSDSFLGVGLIDMYSKCNS 262
Query: 115 IDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMP--------------MKS 160
+D AR +F++MPE++ ++W A++ G++Q ++A LF M +KS
Sbjct: 263 MDDARLVFKLMPERDMIAWNAVISGHSQNEEDEEAASLFPLMHTEGIGFNQTTLSTVLKS 322
Query: 161 VVA-------------------------SNSMILGLGQNGEVQKARVVFDQMREKDDATW 195
+ A NS+I G+ G V+ A VF++ D +
Sbjct: 323 IAALQANYMCRQIHALSLKSGFEFDNYVVNSLIDTYGKCGHVEDATRVFEESPIVDLVLF 382
Query: 196 SGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVR 255
+ ++ Y + G E + L+ MQ G++ + S+L+ CASL++ + G+QVH +++
Sbjct: 383 TSLVTAYAQDGQGEEALRLYLEMQDRGIKPDSFVCSSLLNACASLSAYEQGKQVHVHILK 442
Query: 256 CQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKV 315
F D++ + L+ MY KCG + F + IV W+++I G AQ+G G+++L++
Sbjct: 443 FGFMSDIFAGNSLVNMYAKCGSIEDASCAFSRIPVRGIVSWSAMIGGLAQHGYGKEALQL 502
Query: 316 FHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLG 375
F +M GV P+ +TLV VL AC++ G V E + F SMK + +EP EHYACM+DLLG
Sbjct: 503 FKQMLKVGVPPNHITLVSVLCACNHAGLVAEAKHYFNSMKILFGIEPMQEHYACMIDLLG 562
Query: 376 RAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYIL 435
RAG++E AM+L+ MPF+ +A++WG+LLGA R H +DL E AA+ LL LEP+ +G ++L
Sbjct: 563 RAGKLEAAMELVNKMPFQANALVWGALLGAARIHKNIDLGEQAAEMLLALEPEKSGTHVL 622
Query: 436 LSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMR 495
L+NIYAS G + VA +R+ M+ V K PG SW+EV+ KV+ F D SH I
Sbjct: 623 LANIYASVGMWDKVARVRRLMKDGKVKKEPGMSWLEVKDKVYTFIVGD-RSHSRSTEIYA 681
Query: 496 MLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMK 555
L+++ LL++AGY P LHDV+ EK L +HSEKLAVA+GL+ P G PIRV K
Sbjct: 682 KLDELSDLLKKAGYVPMVEIDLHDVERSEKEQLLYHHSEKLAVAFGLIATPPGAPIRVKK 741
Query: 556 NLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
NLR+C DCH+ +K ISK++ REII+RD NRFHHF++G CSC +YW
Sbjct: 742 NLRICFDCHTVLKFISKIVSREIIVRDTNRFHHFREGSCSCGEYW 786
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 112/430 (26%), Positives = 209/430 (48%), Gaps = 28/430 (6%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM------PEKNVVSWTVMLGGFIRDSRID 54
+P+R+VVSW A+ YV M EA +LF M P + +S + + + DS
Sbjct: 71 IPDRSVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINVCTGLEDSV-- 128
Query: 55 DARR----LFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYV 110
R+ L + + D + +V Y + G +++ +FDE+ K +++SW +I+G V
Sbjct: 129 QGRKIHGYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAKPDIVSWNAIIAGCV 188
Query: 111 NNNRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNS 166
+ A +L M + N + ++ L + +L ++ +K + S+S
Sbjct: 189 LHEYHHRALELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSL-IKMDMGSDS 247
Query: 167 MILGLG------QNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQK 220
LG+G + + AR+VF M E+D W+ +I + + + E LF LM
Sbjct: 248 -FLGVGLIDMYSKCNSMDDARLVFKLMPERDMIAWNAVISGHSQNEEDEEAASLFPLMHT 306
Query: 221 EGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVK 280
EG+ N +L +VL A+L + RQ+HA ++ F+ D YV + LI Y KCG +
Sbjct: 307 EGIGFNQTTLSTVLKSIAALQANYMCRQIHALSLKSGFEFDNYVVNSLIDTYGKCGHVED 366
Query: 281 GKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSY 340
+F+ D+V++ S+++ YAQ G GE++L+++ EM G+ PD +L+AC+
Sbjct: 367 ATRVFEESPIVDLVLFTSLVTAYAQDGQGEEALRLYLEMQDRGIKPDSFVCSSLLNACAS 426
Query: 341 TGKVKEGREI-FESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIW 399
++G+++ +K ++ + + +V++ + G +EDA +P + W
Sbjct: 427 LSAYEQGKQVHVHILKFGFMSDIFAGN--SLVNMYAKCGSIEDASCAFSRIPVR-GIVSW 483
Query: 400 GSLLGACRTH 409
+++G H
Sbjct: 484 SAMIGGLAQH 493
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 95/353 (26%), Positives = 173/353 (49%), Gaps = 18/353 (5%)
Query: 65 EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEV 124
+ D ++V+ Y + G + R +FD +P ++V+SW + S YV+++ A LF
Sbjct: 42 DSDEFVANSLVILYAKCGGFGDARSLFDAIPDRSVVSWNALFSCYVHSDMHGEAVSLFHD 101
Query: 125 MP----EKNEVSWTAMLMGYTQCGRIQDAWE-------LFKAMPMKSVVASNSMILGLGQ 173
M NE S ++M+ C ++D+ + L K ++N+++ +
Sbjct: 102 MVLSGIRPNEFSLSSMI---NVCTGLEDSVQGRKIHGYLIKLGYDSDAFSANALVDMYAK 158
Query: 174 NGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISV 233
G ++ A VFD++ + D +W+ +I Y ++L M K G+ N +L S
Sbjct: 159 VGILEDASSVFDEIAKPDIVSWNAIIAGCVLHEYHHRALELLREMNKSGMCPNMFTLSSA 218
Query: 234 LSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDI 293
L CA +A + GRQ+H+ L++ D ++ LI MY KC + +L+F +D+
Sbjct: 219 LKACAGMALRELGRQLHSSLIKMDMGSDSFLGVGLIDMYSKCNSMDDARLVFKLMPERDM 278
Query: 294 VMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFE- 352
+ WN++ISG++Q E++ +F M + G+ + TL VL + + R+I
Sbjct: 279 IAWNAVISGHSQNEEDEEAASLFPLMHTEGIGFNQTTLSTVLKSIAALQANYMCRQIHAL 338
Query: 353 SMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
S+KS + E ++D G+ G VEDA ++ E P D +++ SL+ A
Sbjct: 339 SLKSGF--EFDNYVVNSLIDTYGKCGHVEDATRVFEESPI-VDLVLFTSLVTA 388
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 101/196 (51%), Gaps = 10/196 (5%)
Query: 218 MQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGE 277
M G++ N + SVL C L G+QVH +V FD D +VA+ L+ +Y KCG
Sbjct: 1 MHLLGIKCNEFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGG 60
Query: 278 LVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSA 337
+ +FD + +V WN++ S Y + +++ +FH+M SG+ P++ +L +++
Sbjct: 61 FGDARSLFDAIPDRSVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINV 120
Query: 338 CSYTGKVKEGREIFESMKSKYLVEPKTEHYA----CMVDLLGRAGQVEDAMKLIEAMPFE 393
C+ +GR+I YL++ + A +VD+ + G +EDA + + + +
Sbjct: 121 CTGLEDSVQGRKI-----HGYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIA-K 174
Query: 394 PDAIIWGSLLGACRTH 409
PD + W +++ C H
Sbjct: 175 PDIVSWNAIIAGCVLH 190
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 72/145 (49%), Gaps = 18/145 (12%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM-----PEKNVVSWTVML----GGFIRDS 51
+P R +VSW+AM+ G + G EA LF QM P ++ +V+ G + ++
Sbjct: 475 IPVRGIVSWSAMIGGLAQHGYGKEALQLFKQMLKVGVPPNHITLVSVLCACNHAGLVAEA 534
Query: 52 R--IDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMP-KKNVISWTTMISG 108
+ + + LF + P ++ A +LG + G+++ E+ ++MP + N + W ++
Sbjct: 535 KHYFNSMKILFGIEPMQEHYACMIDLLG--RAGKLEAAMELVNKMPFQANALVWGALLGA 592
Query: 109 YVNNNRIDVARKLFEVM----PEKN 129
+ ID+ + E++ PEK+
Sbjct: 593 ARIHKNIDLGEQAAEMLLALEPEKS 617
>gi|38606535|emb|CAE06013.3| OSJNBa0016O02.23 [Oryza sativa Japonica Group]
gi|116310014|emb|CAH67039.1| OSIGBa0124N08.1 [Oryza sativa Indica Group]
gi|116310420|emb|CAH67428.1| OSIGBa0150F01.8 [Oryza sativa Indica Group]
Length = 939
Score = 437 bits (1123), Expect = e-120, Method: Compositional matrix adjust.
Identities = 228/642 (35%), Positives = 358/642 (55%), Gaps = 50/642 (7%)
Query: 7 VSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMM--- 63
+ A++ Y G + A +F ++ +K+ +SW ML ++++ +A F M
Sbjct: 300 IQCNALLVMYARCGWVDSALRVFREIGDKDYISWNSMLSCYVQNRLYAEAIDFFGEMVQN 359
Query: 64 ---PEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVIS----WTTMISGYVNNNRID 116
P+ + +G+ GR+ GRE+ K+ + S T++ Y+ ++
Sbjct: 360 GFNPDHACIVSLLSAVGHL--GRLINGREVHAYAVKQRLDSDLQIANTLMDMYIKCYSVE 417
Query: 117 VARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKA----------MPMKSVVAS-- 164
+ ++F+ M K+ VSWT ++ Y Q R +A F+ M M S++ +
Sbjct: 418 CSARVFDRMRIKDHVSWTTIIACYAQSSRYSEAIGKFRTAQKEGIKVDPMMMGSILEACS 477
Query: 165 --------------------------NSMILGLGQNGEVQKARVVFDQMREKDDATWSGM 198
N +I G+ GEV A +F+ + +KD TW+ M
Sbjct: 478 GLKSISLLKQVHSYAIRNGLLDLILKNRIIDIYGECGEVCYALNIFEMLDKKDIVTWTSM 537
Query: 199 IKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQF 258
+ + G E + LF M G++ + +L+ +L A L+SL G+++H L+R +F
Sbjct: 538 VNCFAENGLLHEAVALFGKMLNAGIQPDSVALVGILGAIAGLSSLTKGKEIHGFLIRGKF 597
Query: 259 DVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHE 318
V+ V S L+ MY CG + +FD KD+V+W ++I+ +G G++++ +F
Sbjct: 598 PVEGAVVSSLVDMYSGCGSMNYALKVFDEAKCKDVVLWTAMINATGMHGHGKQAIYIFKR 657
Query: 319 MFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAG 378
M +GV PD V+ + +L ACS++ V EG+ + M SKY ++P EHYAC+VDLLGR+G
Sbjct: 658 MLETGVSPDHVSFLALLYACSHSKLVDEGKFYLDMMVSKYKLQPWQEHYACVVDLLGRSG 717
Query: 379 QVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSN 438
Q E+A K I++MP EP +++W +LLGACR H +LA +A KLL+LEP N G Y+L+SN
Sbjct: 718 QTEEAYKFIKSMPLEPKSVVWCALLGACRIHKNHELAMIATDKLLELEPDNPGNYVLVSN 777
Query: 439 IYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLE 498
++A G++++V E+R M ++ + K P CSWIE+ VH FT RD + +++ E
Sbjct: 778 VFAEMGKWNNVKEIRTKMTEQGLRKDPACSWIEIGNTVHTFTARDHSHRDSQAIHLKLAE 837
Query: 499 KIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLR 558
L RE Y D+SFVLHDV EEEK+ L HSE+LA+++GL+ G P+R+ KNLR
Sbjct: 838 ITEKLRREGQYVEDTSFVLHDVSEEEKIDLLHRHSERLAISFGLISTASGTPLRIAKNLR 897
Query: 559 VCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
VCGDCH KL+SK+ REI++RDANRFHHF G CSC D+W
Sbjct: 898 VCGDCHEFTKLVSKLFEREIVVRDANRFHHFSGGTCSCGDFW 939
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 101/387 (26%), Positives = 185/387 (47%), Gaps = 19/387 (4%)
Query: 72 TNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEV 131
T ++ Y + GR+ + +FD MP + V SW +I +++ A ++ M V
Sbjct: 97 TKLLFMYGKCGRLPDAHRLFDGMPARTVFSWNALIGACLSSGGAGEAVGVYRAMRASEPV 156
Query: 132 SWTA-------------MLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQ 178
+ A G +CG + + ++VA N+++ + G +
Sbjct: 157 AGAAPDGCTLASVLKACGAEGDGRCGSEVHGLAVKSGLDRSTLVA-NALVGMYAKCGLLD 215
Query: 179 KARVVFDQMRE-KDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVC 237
A VF+ MR+ +D A+W+ I + G LE +DLF MQ +G +N + + VL VC
Sbjct: 216 SALRVFEWMRDGRDVASWNSAISGCVQNGMFLEALDLFRRMQSDGFSMNSYTTVGVLQVC 275
Query: 238 ASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWN 297
A LA L+HGR++HA L++C + ++ ++L+ MY +CG + +F KD + WN
Sbjct: 276 AELAQLNHGRELHAALLKCGTEFNIQCNALLV-MYARCGWVDSALRVFREIGDKDYISWN 334
Query: 298 SIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSK 357
S++S Y Q L +++ F EM +G PD +V +LSA + G++ GRE+ + K
Sbjct: 335 SMLSCYVQNRLYAEAIDFFGEMVQNGFNPDHACIVSLLSAVGHLGRLINGREV-HAYAVK 393
Query: 358 YLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEV 417
++ + ++D+ + VE + ++ + M + D + W +++ AC +
Sbjct: 394 QRLDSDLQIANTLMDMYIKCYSVECSARVFDRMRIK-DHVSWTTII-ACYAQSSRYSEAI 451
Query: 418 AAKKLLQLEPKNAGPYILLSNIYASQG 444
+ Q E P ++ S + A G
Sbjct: 452 GKFRTAQKEGIKVDPMMMGSILEACSG 478
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 104/423 (24%), Positives = 187/423 (44%), Gaps = 23/423 (5%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM----------PEKNVVSWTVMLGGFIRD 50
MP R V SW A++ + G EA ++ M P+ ++ + G D
Sbjct: 119 MPARTVFSWNALIGACLSSGGAGEAVGVYRAMRASEPVAGAAPDGCTLASVLKACGAEGD 178
Query: 51 SRIDDARRLFDMMP--EKDVVAQTNMVLGYCQDGRVDEGREIFDEM-PKKNVISWTTMIS 107
R + ++ + +V Y + G +D +F+ M ++V SW + IS
Sbjct: 179 GRCGSEVHGLAVKSGLDRSTLVANALVGMYAKCGLLDSALRVFEWMRDGRDVASWNSAIS 238
Query: 108 GYVNNNRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAM---PMKS 160
G V N A LF M N + +L + ++ EL A+ +
Sbjct: 239 GCVQNGMFLEALDLFRRMQSDGFSMNSYTTVGVLQVCAELAQLNHGRELHAALLKCGTEF 298
Query: 161 VVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQK 220
+ N++++ + G V A VF ++ +KD +W+ M+ Y + E ID F M +
Sbjct: 299 NIQCNALLVMYARCGWVDSALRVFREIGDKDYISWNSMLSCYVQNRLYAEAIDFFGEMVQ 358
Query: 221 EGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVK 280
G + ++S+LS L L +GR+VHA V+ + D D+ +A+ L+ MYIKC +
Sbjct: 359 NGFNPDHACIVSLLSAVGHLGRLINGREVHAYAVKQRLDSDLQIANTLMDMYIKCYSVEC 418
Query: 281 GKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSY 340
+FD KD V W +II+ YAQ +++ F G+ D + + +L ACS
Sbjct: 419 SARVFDRMRIKDHVSWTTIIACYAQSSRYSEAIGKFRTAQKEGIKVDPMMMGSILEACSG 478
Query: 341 TGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWG 400
+ +++ L++ ++ ++D+ G G+V A+ + E M + D + W
Sbjct: 479 LKSISLLKQVHSYAIRNGLLDLILKNR--IIDIYGECGEVCYALNIFE-MLDKKDIVTWT 535
Query: 401 SLL 403
S++
Sbjct: 536 SMV 538
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 118/254 (46%), Gaps = 9/254 (3%)
Query: 164 SNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKE-- 221
+ ++ G+ G + A +FD M + +W+ +I G E + ++ M+
Sbjct: 96 ATKLLFMYGKCGRLPDAHRLFDGMPARTVFSWNALIGACLSSGGAGEAVGVYRAMRASEP 155
Query: 222 --GVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELV 279
G + +L SVL C + G +VH V+ D VA+ L+ MY KCG L
Sbjct: 156 VAGAAPDGCTLASVLKACGAEGDGRCGSEVHGLAVKSGLDRSTLVANALVGMYAKCGLLD 215
Query: 280 KGKLIFDNFA-SKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSAC 338
+F+ +D+ WNS ISG Q G+ ++L +F M S G + T VGVL C
Sbjct: 216 SALRVFEWMRDGRDVASWNSAISGCVQNGMFLEALDLFRRMQSDGFSMNSYTTVGVLQVC 275
Query: 339 SYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAII 398
+ ++ GRE+ ++ K E + A +V + R G V+ A+++ + + D I
Sbjct: 276 AELAQLNHGRELHAALL-KCGTEFNIQCNALLV-MYARCGWVDSALRVFREIG-DKDYIS 332
Query: 399 WGSLLGACRTHMKL 412
W S+L +C +L
Sbjct: 333 WNSML-SCYVQNRL 345
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 83/181 (45%), Gaps = 8/181 (4%)
Query: 233 VLSVCASLASLDHGRQVHAQLVRCQF---DVDVYVASVLITMYIKCGELVKGKLIFDNFA 289
VL + A ++ GRQ+HA V D ++A+ L+ MY KCG L +FD
Sbjct: 61 VLDLVAVRRAVSEGRQLHAHAVATGALGDDDAGFLATKLLFMYGKCGRLPDAHRLFDGMP 120
Query: 290 SKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSS----GVMPDDVTLVGVLSACSYTGKVK 345
++ + WN++I G +++ V+ M +S G PD TL VL AC G +
Sbjct: 121 ARTVFSWNALIGACLSSGGAGEAVGVYRAMRASEPVAGAAPDGCTLASVLKACGAEGDGR 180
Query: 346 EGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
G E+ + K ++ T +V + + G ++ A+++ E M D W S +
Sbjct: 181 CGSEV-HGLAVKSGLDRSTLVANALVGMYAKCGLLDSALRVFEWMRDGRDVASWNSAISG 239
Query: 406 C 406
C
Sbjct: 240 C 240
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 106/243 (43%), Gaps = 25/243 (10%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV----VSWTVMLGGFIRDSRIDDA 56
+ ++++V+WT+MV + E G++ EA LF +M + V+ +LG S +
Sbjct: 526 LDKKDIVTWTSMVNCFAENGLLHEAVALFGKMLNAGIQPDSVALVGILGAIAGLSSLTKG 585
Query: 57 RRLFDMM-----PEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYV- 110
+ + + P + V +++V Y G ++ ++FDE K+V+ WT MI+
Sbjct: 586 KEIHGFLIRGKFPVEGAVV-SSLVDMYSGCGSMNYALKVFDEAKCKDVVLWTAMINATGM 644
Query: 111 ---NNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDA-------WELFKAMPMKS 160
I + +++ E + VS+ A+L + + + +K P +
Sbjct: 645 HGHGKQAIYIFKRMLETGVSPDHVSFLALLYACSHSKLVDEGKFYLDMMVSKYKLQPWQE 704
Query: 161 VVASNSMILGLGQNGEVQKARVVFDQMR-EKDDATWSGMIKVYE-RKGYELEVIDLFTLM 218
A ++ LG++G+ ++A M E W ++ K +EL +I L+
Sbjct: 705 HYA--CVVDLLGRSGQTEEAYKFIKSMPLEPKSVVWCALLGACRIHKNHELAMIATDKLL 762
Query: 219 QKE 221
+ E
Sbjct: 763 ELE 765
>gi|302770521|ref|XP_002968679.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
gi|300163184|gb|EFJ29795.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
Length = 818
Score = 437 bits (1123), Expect = e-119, Method: Compositional matrix adjust.
Identities = 233/652 (35%), Positives = 370/652 (56%), Gaps = 53/652 (8%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMP---EKNVVSWTVMLGGFIRDSRIDDAR 57
+ R+ SW A++ + + G + A +F +M + N ++ ++ GF + + R
Sbjct: 168 LQTRDETSWNAVILAHSQSGDWSGALRIFKEMKCDVKPNSTTYINVISGFSTPEVLPEGR 227
Query: 58 RLFDMMP----EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNN 113
++ + + D+V T ++ Y + G E RE+FD+M K++++SW MI YV N
Sbjct: 228 KIHAEIVANGFDTDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVLNG 287
Query: 114 RIDVARKLFEVMP----EKNEVSW-----------------------------------T 134
A +L++ + ++ + ++ T
Sbjct: 288 DFHEALELYQKLDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVAT 347
Query: 135 AMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNG---EVQKARVVFDQMREKD 191
A++ Y +CG +++A ++F AM + VA +++I NG + +KAR VFD++ +D
Sbjct: 348 ALVNMYAKCGSLEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRD 407
Query: 192 DATWSGMIKVYERKGYELEVIDLFTLMQ-KEGVRVNFPSLISVLSVCASLASLDHGRQVH 250
+W+ MI Y + G + + +F M G++ + + I+VL CASL L + +H
Sbjct: 408 TISWNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALH 467
Query: 251 AQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGE 310
AQ+ + + +V V + LI MY +CG L + + +F K +V W ++++ ++QYG
Sbjct: 468 AQISESELESNVVVTNTLINMYARCGSLEEAERLFAAAKEKTVVSWTAMVAAFSQYGRYA 527
Query: 311 KSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACM 370
++L +F EM GV PDDVT +L C++ G +++G F M + + P +H+A M
Sbjct: 528 EALDLFQEMDLEGVKPDDVTYTSILFVCTHGGSLEQGWRYFTDMAELHALAPTADHFAAM 587
Query: 371 VDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNA 430
VDLLGR+G++ DA +L+E+MPFEPD + W + L ACR H KL+L E AA+++ +L+P +
Sbjct: 588 VDLLGRSGRLFDAKELLESMPFEPDPVAWMTFLTACRIHGKLELGEAAAERVYELDPSST 647
Query: 431 GPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEH 490
PYI +SNIYA+ G + VA +RK M +R + K PG S+IEV+ K+H F+ HP
Sbjct: 648 APYIAMSNIYAAHGMWEKVASVRKKMEERGLKKLPGLSFIEVDGKLHEFSSGG-KYHPRT 706
Query: 491 PMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLV-KLPEGV 549
I L ++ GL+R AGY PD+ VLHDV E EK L YHSEK+A+A+GLV G
Sbjct: 707 DEICEELTRLHGLMRAAGYVPDTKAVLHDVSEGEKETMLLYHSEKMAIAFGLVSSRGSGE 766
Query: 550 PIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHF-KDGLCSCRDYW 600
PIRV+KNLRVC DCH+A K I+++ GR+II+RD NRFH F DG CSC DYW
Sbjct: 767 PIRVVKNLRVCSDCHTATKFIARIAGRDIIVRDCNRFHRFSSDGKCSCGDYW 818
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 99/418 (23%), Positives = 200/418 (47%), Gaps = 16/418 (3%)
Query: 65 EKDVVAQTNMVLGYCQDGRVDEGREIFDEMP--KKNVISWTTMISGYVNNNRIDVARKLF 122
E+D + ++ Y + + + R +F+ M ++NV+SW MI+ Y N A L+
Sbjct: 39 ERDTMVGNALISMYGKCDSLVDARSVFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLY 98
Query: 123 EVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVA----SNSMILGLGQN 174
M + + V++ ++L C + E+ + + + +N+++ +
Sbjct: 99 WRMNLQGLGTDHVTFVSVL---GACSSLAQGREIHNRVFYSGLDSFQSLANALVTMYARF 155
Query: 175 GEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVL 234
G V A+ +F ++ +D+ +W+ +I + + G + +F M+ + V+ N + I+V+
Sbjct: 156 GSVGDAKRMFQSLQTRDETSWNAVILAHSQSGDWSGALRIFKEMKCD-VKPNSTTYINVI 214
Query: 235 SVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIV 294
S ++ L GR++HA++V FD D+ VA+ LI MY KCG + + +FD +D+V
Sbjct: 215 SGFSTPEVLPEGRKIHAEIVANGFDTDLVVATALINMYGKCGSSHEAREVFDKMKKRDMV 274
Query: 295 MWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESM 354
WN +I Y G ++L+++ ++ G T V +L ACS + +GR + +
Sbjct: 275 SWNVMIGCYVLNGDFHEALELYQKLDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHI 334
Query: 355 KSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDL 414
+ L + + +V++ + G +E+A K+ AM DA+ W +L+GA ++
Sbjct: 335 LERGL-DSEVAVATALVNMYAKCGSLEEARKVFNAMK-NRDAVAWSTLIGAYASNGYGKD 392
Query: 415 AEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEV 472
A A K +L ++ + + Y G ++ + M +KP ++I V
Sbjct: 393 ARKARKVFDRLGSRDTISWNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAV 450
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 96/177 (54%), Gaps = 7/177 (3%)
Query: 229 SLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFD-- 286
+ ++VL C+S + GR +H ++ +F+ D V + LI+MY KC LV + +F+
Sbjct: 9 TFLTVLCSCSSCGDVVEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARSVFESM 68
Query: 287 NFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKE 346
++ +++V WN++I+ YAQ G ++L ++ M G+ D VT V VL ACS + +
Sbjct: 69 DWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACS---SLAQ 125
Query: 347 GREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
GREI + L ++ A +V + R G V DA ++ +++ D W +++
Sbjct: 126 GREIHNRVFYSGLDSFQSLANA-LVTMYARFGSVGDAKRMFQSLQTR-DETSWNAVI 180
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Query: 326 PDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMK 385
PD+VT + VL +CS G V EGR + E ++ E T ++ + G+ + DA
Sbjct: 5 PDNVTFLTVLCSCSSCGDVVEGRALHERIRCSRF-ERDTMVGNALISMYGKCDSLVDARS 63
Query: 386 LIEAMPF-EPDAIIWGSLLGA 405
+ E+M + + + + W +++ A
Sbjct: 64 VFESMDWRQRNVVSWNAMIAA 84
>gi|224122590|ref|XP_002330519.1| predicted protein [Populus trichocarpa]
gi|222872453|gb|EEF09584.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 437 bits (1123), Expect = e-119, Method: Compositional matrix adjust.
Identities = 228/612 (37%), Positives = 355/612 (58%), Gaps = 17/612 (2%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQM------PEKNVVSWTVMLGGFIRDSRIDDARR 58
+VV+W+AM+ G ++G EA LF M P + +S V + D R +
Sbjct: 116 DVVAWSAMITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIH 175
Query: 59 --LFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRID 116
+ E D + +++ Y + V++G ++F+ M +++SW ++SG+ ++
Sbjct: 176 GCICKYGFESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCG 235
Query: 117 VARKLF-EVMPEKNEVSWTAMLMGYTQCGRIQDA-------WELFKAMPMKSVVASNSMI 168
++F +++ E + + + C + D + K +++
Sbjct: 236 RGPRIFYQMLLEGFKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGTALV 295
Query: 169 LGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFP 228
+ ++ A V FD++ +D +W+ +I Y + + + F MQ+EG++ N
Sbjct: 296 DMYAKARCLEDAGVAFDRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQREGIKPNEY 355
Query: 229 SLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNF 288
+L S LS C+ +A+L++GRQ+HA V+ D++V S L+ +Y KCG + + IF
Sbjct: 356 TLASCLSGCSHMATLENGRQLHAVAVKAGHFGDIFVGSALVDLYGKCGCMEHAEAIFKGL 415
Query: 289 ASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGR 348
S+DIV WN+IISGY+Q+G GEK+L+ F M S G+MPD+ T +GVLSACS+ G V+EG+
Sbjct: 416 ISRDIVSWNTIISGYSQHGQGEKALEAFRMMLSEGIMPDEATFIGVLSACSFMGLVEEGK 475
Query: 349 EIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRT 408
+ F+SM Y + P EHYACMVD+LGRAG+ + IE M P ++IW ++LGAC+
Sbjct: 476 KRFDSMSKIYGINPSIEHYACMVDILGRAGKFNEVKIFIEEMNLTPYSLIWETVLGACKL 535
Query: 409 HMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCS 468
H +D E AAKKL ++EP YILLSNI+AS+GR+ DV +R M R + K PGCS
Sbjct: 536 HGNVDFGEKAAKKLFEMEPMMDSSYILLSNIFASKGRWDDVRNIRALMTSRGIKKEPGCS 595
Query: 469 WIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHS 528
W+EV+ +VH+F +D SHP+ I L+K+G L GY P + VLH+V +EK+
Sbjct: 596 WVEVDGQVHVFLSQD-GSHPKIREIYAKLDKLGQSLMSIGYVPKTEVVLHNVSNKEKMEH 654
Query: 529 LRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHH 588
L YHSE+LA+++ L+ PIR+ KNLR+C DCH +KLIS + +EI++RD RFHH
Sbjct: 655 LYYHSERLALSFALLSTNAVKPIRIFKNLRICEDCHDFMKLISDITNQEIVVRDIRRFHH 714
Query: 589 FKDGLCSCRDYW 600
FK G CSC+D W
Sbjct: 715 FKRGTCSCQDRW 726
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 116/453 (25%), Positives = 195/453 (43%), Gaps = 61/453 (13%)
Query: 25 AGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDV----VAQTNMVLGYCQ 80
A LF+ MPEKN VSW +L G+ + +LF M E + + ++ G
Sbjct: 4 AERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKGCAN 63
Query: 81 DGRVDEGREIFDEMPKKNV----ISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAM 136
G + EG+ + + +++ Y + A K+F + + V+W+AM
Sbjct: 64 TGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVAWSAM 123
Query: 137 LMGYTQCGRIQDAWELFKAMPMKSV----------------------------------- 161
+ G Q G Q+A ELF M K
Sbjct: 124 ITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCICKYGF 183
Query: 162 ----VASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTL 217
+ SN +I+ ++ V+ VF+ M D +W+ ++ + +F
Sbjct: 184 ESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCGRGPRIFYQ 243
Query: 218 MQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGE 277
M EG + N + ISVL C+SL + G+QVHA +++ D D +V + L+ MY K
Sbjct: 244 MLLEGFKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGTALVDMYAKARC 303
Query: 278 LVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSA 337
L + FD ++DI W IISGYAQ EK++K F +M G+ P++ TL LS
Sbjct: 304 LEDAGVAFDRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQREGIKPNEYTLASCLSG 363
Query: 338 CSYTGKVKEGREIFESMKSKYLVEPKTEHY------ACMVDLLGRAGQVEDAMKLIEAMP 391
CS+ ++ GR++ + V K H+ + +VDL G+ G +E A + + +
Sbjct: 364 CSHMATLENGRQL-------HAVAVKAGHFGDIFVGSALVDLYGKCGCMEHAEAIFKGL- 415
Query: 392 FEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQ 424
D + W +++ H + + A A + +L
Sbjct: 416 ISRDIVSWNTIISGYSQHGQGEKALEAFRMMLS 448
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 91/368 (24%), Positives = 170/368 (46%), Gaps = 54/368 (14%)
Query: 115 IDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAM----PMKSVVASNSMILG 170
+++A +LF MPEKN VSW A+L GY Q G + +LF M S ++++ G
Sbjct: 1 MELAERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKG 60
Query: 171 LGQNGEVQKARV-----------------------------------VFDQMREKDDATW 195
G +++ +V VF ++R D W
Sbjct: 61 CANTGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVAW 120
Query: 196 SGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVR 255
S MI +++G+ E +LF LM+++G R N +L S++S ++ L +G+ +H + +
Sbjct: 121 SAMITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCICK 180
Query: 256 CQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKV 315
F+ D V++ LI MY+K + G +F+ + D+V WN+++SG+ + ++
Sbjct: 181 YGFESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCGRGPRI 240
Query: 316 FHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEH----YACMV 371
F++M G P+ T + VL +CS + G+++ ++++ ++ +V
Sbjct: 241 FYQMLLEGFKPNMFTFISVLRSCSSLLDPEFGKQV-----HAHIIKNSSDDDDFVGTALV 295
Query: 372 DLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAG 431
D+ +A +EDA + + D W ++ + + D AE A K Q++ +
Sbjct: 296 DMYAKARCLEDAGVAFDRL-VNRDIFSWTVIISG---YAQTDQAEKAVKYFRQMQREGIK 351
Query: 432 P--YILLS 437
P Y L S
Sbjct: 352 PNEYTLAS 359
>gi|449480302|ref|XP_004155856.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 654
Score = 437 bits (1123), Expect = e-119, Method: Compositional matrix adjust.
Identities = 238/617 (38%), Positives = 370/617 (59%), Gaps = 25/617 (4%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQMPEK--NV---VSWTVMLGG--FIRDSRIDDAR 57
+V++W +M+R +V M A + +M E+ NV ++ +L G + + ++
Sbjct: 42 DVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGCALLLEFKVGKVL 101
Query: 58 --RLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRI 115
++ M D+ +T ++ Y G + R +F+ M +N + WT+MISGY+ N+
Sbjct: 102 HGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTSMISGYMKNHCP 161
Query: 116 DVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDA------WELFKAMPMKSVVASN 165
+ A L++ M E +EV+ ++ + C ++D + M MK
Sbjct: 162 NEALLLYKKMEEDGFSPDEVTMATLV---SACAELKDLGVGMKLHSHIREMDMKICAVLG 218
Query: 166 SMILGL-GQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLF-TLMQKEGV 223
S ++ + + G+++ AR VFDQ+ +KD WS +I Y + E + LF + +
Sbjct: 219 SALVNMYAKCGDLKTARQVFDQLSDKDVYAWSALIFGYVKNNRSTEALQLFREVAGGSNM 278
Query: 224 RVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKL 283
R N ++++V+S CA L L+ GR VH + R Q V + + LI M+ KCG++ K
Sbjct: 279 RPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAAKR 338
Query: 284 IFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGK 343
IFD+ + KD++ WNS+++G A +GLG ++L FH M ++ + PD++T +GVL+ACS+ G
Sbjct: 339 IFDSMSYKDLISWNSMVNGLALHGLGREALAQFHLMQTTDLQPDEITFIGVLTACSHAGL 398
Query: 344 VKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
V+EG+++F +++ Y V K+EHY CMVDLL RAG + +A + I MP +PD IWGS+L
Sbjct: 399 VQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVMPLQPDGAIWGSML 458
Query: 404 GACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIK 463
GACR + L+L E AA+ LL+LEP N G YILLSNIYA + +++V ++R+ M ++ + K
Sbjct: 459 GACRVYNNLELGEEAARCLLELEPTNDGVYILLSNIYARRKMWNEVKKVRELMNEKGIQK 518
Query: 464 PPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEE 523
PGCS + ++ H F DC SHPE I ML ++ L+ GY D+S VL ++D+
Sbjct: 519 TPGCSSVVIDNIAHSFLAGDC-SHPEIAEISIMLRQVREKLKLVGYVADTSEVLLNIDDN 577
Query: 524 EKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDA 583
+K S+ HSEKLA+ YGL+K G I ++KNLRVC DCH+ IKL+SK+ R+I LRD
Sbjct: 578 KKEESVSQHSEKLALCYGLLKSEIGGRIVILKNLRVCSDCHTLIKLVSKIYQRQITLRDR 637
Query: 584 NRFHHFKDGLCSCRDYW 600
NRFHHFKDG CSCRDYW
Sbjct: 638 NRFHHFKDGSCSCRDYW 654
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 127/270 (47%), Gaps = 17/270 (6%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV----VSWTVMLGGFIRDSRIDDA 56
M RN V WT+M+ GY++ EA L+ +M E V+ ++ +
Sbjct: 140 MGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVG 199
Query: 57 RRLFDMMPEKDV----VAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+L + E D+ V + +V Y + G + R++FD++ K+V +W+ +I GYV N
Sbjct: 200 MKLHSHIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDQLSDKDVYAWSALIFGYVKN 259
Query: 113 NRIDVARKLFEVMP-----EKNEVSWTAMLMGYTQCGRIQDA-W---ELFKAMPMKSVVA 163
NR A +LF + NEV+ A++ Q G ++ W + + SV
Sbjct: 260 NRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSL 319
Query: 164 SNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGV 223
+NS+I + G++ A+ +FD M KD +W+ M+ G E + F LMQ +
Sbjct: 320 NNSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGLALHGLGREALAQFHLMQTTDL 379
Query: 224 RVNFPSLISVLSVCASLASLDHGRQVHAQL 253
+ + + I VL+ C+ + G+++ ++
Sbjct: 380 QPDEITFIGVLTACSHAGLVQEGKKLFYEI 409
Score = 42.0 bits (97), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 27/128 (21%), Positives = 59/128 (46%), Gaps = 4/128 (3%)
Query: 284 IFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFS-SGVMPDDVTLVGVLSACSYTG 342
+F + D++ WNS++ + + ++L+ + EM S +PD T +L C+
Sbjct: 34 VFAHTRVLDVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGCALLL 93
Query: 343 KVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSL 402
+ K G+ + KY++ ++++ G ++ A L E M + ++W S+
Sbjct: 94 EFKVGK-VLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHR-NKVVWTSM 151
Query: 403 L-GACRTH 409
+ G + H
Sbjct: 152 ISGYMKNH 159
>gi|2245038|emb|CAB10457.1| hypothetical protein [Arabidopsis thaliana]
gi|7268435|emb|CAB80955.1| hypothetical protein [Arabidopsis thaliana]
Length = 851
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 237/553 (42%), Positives = 331/553 (59%), Gaps = 34/553 (6%)
Query: 17 VEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRD-SRIDDARRLFDMMPEKDVVAQTNMV 75
V G I A +F M KN ++W +L G +D SR+ +A +LFD +PE D + M+
Sbjct: 72 VRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMMEAHQLFDEIPEPDTFSYNIML 131
Query: 76 LGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTA 135
Y ++ ++ + FD MP K+ SW TMI+GY ++ AR+LF M EKNEVSW A
Sbjct: 132 SCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSMMEKNEVSWNA 191
Query: 136 MLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMR-EKDDAT 194
M+ GY +CG ++ A FK P++ VVA +MI G + +V+ A +F M K+ T
Sbjct: 192 MISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVT 251
Query: 195 WSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLV 254
W+ MI Y + + LF M +EG+R N L S L C
Sbjct: 252 WNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGC----------------- 294
Query: 255 RCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLK 314
+ LI+MY KCGEL +F+ KD+V WN++ISGYAQ+G +K+L
Sbjct: 295 ---------TLTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALC 345
Query: 315 VFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLL 374
+F EM + + PD +T V VL AC++ G V G FESM Y VEP+ +HY CMVDLL
Sbjct: 346 LFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLL 405
Query: 375 GRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYI 434
GRAG++E+A+KLI +MPF P A ++G+LLGACR H ++LAE AA+KLLQL +NA Y+
Sbjct: 406 GRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNAAGYV 465
Query: 435 LLSNIYASQGRFHDVAELRKNMRKRNV-----IKPPGCSWIEVEKKVHMFTGRDCVSHPE 489
L+NIYAS+ R+ DVA +RK M++ NV +K PG SWIE+ KVH F D + HPE
Sbjct: 466 QLANIYASKNRWEDVARVRKRMKESNVVKVERVKVPGYSWIEIRNKVHHFRSSDRI-HPE 524
Query: 490 HPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGV 549
I + L+++ ++ AGY P+ F LH+V+EE+K L +HSEKLAVA+G +KLP+G
Sbjct: 525 LDSIHKKLKELEKKMKLAGYKPELEFALHNVEEEQKEKLLLWHSEKLAVAFGCIKLPQGS 584
Query: 550 PIRVMKNLRVCGD 562
I+V KNLR+C
Sbjct: 585 QIQVFKNLRICAS 597
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 81/269 (30%), Positives = 139/269 (51%), Gaps = 14/269 (5%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
+PE + S+ M+ YV +A + F +MP K+ SW M+ G+ R ++ AR LF
Sbjct: 119 IPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELF 178
Query: 61 DMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARK 120
M EK+ V+ M+ GY + G +++ F P + V++WT MI+GY+ ++++A
Sbjct: 179 YSMMEKNEVSWNAMISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEA 238
Query: 121 LFEVMP-EKNEVSWTAMLMGYTQCGRIQDAWELFKAM------PMKSVVAS-------NS 166
+F+ M KN V+W AM+ GY + R +D +LF+AM P S ++S S
Sbjct: 239 MFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCTLTS 298
Query: 167 MILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVN 226
+I + GE+ A +F+ M++KD W+ MI Y + G + + LF M +R +
Sbjct: 299 LISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPD 358
Query: 227 FPSLISVLSVCASLASLDHGRQVHAQLVR 255
+ + ++VL C ++ G +VR
Sbjct: 359 WITFVAVLLACNHAGLVNIGMAYFESMVR 387
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 99/382 (25%), Positives = 182/382 (47%), Gaps = 33/382 (8%)
Query: 96 KKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQ-CGRIQDAWELFK 154
+ + +I+ V + ID A ++F M KN ++W ++L+G ++ R+ +A +LF
Sbjct: 58 QDQIFPLNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMMEAHQLFD 117
Query: 155 AMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDL 214
+P + N M+ +N +KA+ FD+M KD A+W+ MI Y R+G + +L
Sbjct: 118 EIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKAREL 177
Query: 215 F-TLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYI 273
F ++M+K V N ++IS C L H +V VR V + +IT Y+
Sbjct: 178 FYSMMEKNEVSWN--AMISGYIECGDLEKASHFFKVAP--VR-----GVVAWTAMITGYM 228
Query: 274 KCGELVKGKLIF-DNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLV 332
K ++ + +F D +K++V WN++ISGY + E LK+F M G+ P+ L
Sbjct: 229 KAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLS 288
Query: 333 GVLSACSYT---------GKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDA 383
L C+ T G++ + ++FE MK K +V + M+ + G + A
Sbjct: 289 SALLGCTLTSLISMYCKCGELGDAWKLFEVMKKKDVVA-----WNAMISGYAQHGNADKA 343
Query: 384 MKLIEAM---PFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLL---QLEPKNAGPYILLS 437
+ L M PD I + ++L AC +++ + ++ ++EP+ Y +
Sbjct: 344 LCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQ-PDHYTCMV 402
Query: 438 NIYASQGRFHDVAELRKNMRKR 459
++ G+ + +L ++M R
Sbjct: 403 DLLGRAGKLEEALKLIRSMPFR 424
>gi|449433141|ref|XP_004134356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 654
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 238/619 (38%), Positives = 372/619 (60%), Gaps = 25/619 (4%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEK--NV---VSWTVMLGG--FIRDSRIDD 55
E +V++W +M+R +V M A + +M E+ NV ++ +L G + + ++
Sbjct: 40 ELDVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGCALLLEFKVGK 99
Query: 56 AR--RLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNN 113
++ M D+ +T ++ Y G + R +F+ M +N + WT+MISGY+ N+
Sbjct: 100 VLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTSMISGYMKNH 159
Query: 114 RIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDA------WELFKAMPMKSVVA 163
+ A L++ M E +EV+ ++ + C ++D + M MK
Sbjct: 160 CPNEALLLYKKMEEDGFSPDEVTMATLV---SACAELKDLGVGMKLHSHIREMDMKICAV 216
Query: 164 SNSMILGL-GQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLF-TLMQKE 221
S ++ + + G+++ AR VFD++ +KD WS +I Y + E + LF +
Sbjct: 217 LGSALVNMYAKCGDLKTARQVFDKLSDKDVYAWSALIFGYVKNNRSTEALQLFREVAGGS 276
Query: 222 GVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKG 281
+R N ++++V+S CA L L+ GR VH + R Q V + + LI M+ KCG++
Sbjct: 277 NMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAA 336
Query: 282 KLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYT 341
K IFD+ + KD++ WNS+++G+A +GLG ++L F M ++ + PD++T +GVL+ACS+
Sbjct: 337 KRIFDSMSYKDLISWNSMVNGFALHGLGREALAQFRLMQTTDLQPDEITFIGVLTACSHA 396
Query: 342 GKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGS 401
G V+EG+++F +++ Y V K+EHY CMVDLL RAG + +A + I MP +PD IWGS
Sbjct: 397 GLVQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVMPLQPDGAIWGS 456
Query: 402 LLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNV 461
+LGACR + L+L E AA+ LL+LEP N G YILLSNIYA + +++V ++R+ M ++ +
Sbjct: 457 MLGACRVYNNLELGEEAARFLLKLEPTNDGVYILLSNIYAKRKMWNEVKKVRELMNEKGI 516
Query: 462 IKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVD 521
K PGCS + ++ H F DC SHPE I ML ++ L+ AGY D+S VL ++D
Sbjct: 517 QKTPGCSSVVIDNIAHSFLAGDC-SHPEIAEISIMLRQVREKLKLAGYVADTSEVLLNID 575
Query: 522 EEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILR 581
+ +K S+ HSEKLA+ YGL+K G I ++KNLRVC DCH+ IKL+SK+ R+I LR
Sbjct: 576 DNKKEESVSQHSEKLALCYGLLKSEIGGRIVILKNLRVCSDCHTLIKLVSKIYQRQITLR 635
Query: 582 DANRFHHFKDGLCSCRDYW 600
D NRFHHFKDG CSCRDYW
Sbjct: 636 DRNRFHHFKDGSCSCRDYW 654
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 82/356 (23%), Positives = 181/356 (50%), Gaps = 26/356 (7%)
Query: 90 IFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEK-----NEVSWTAMLMGYT--- 141
+F + +V++W +M+ +VN+N A + + M E+ + ++ ++L G
Sbjct: 34 VFAHTRELDVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGCALLL 93
Query: 142 --QCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMI 199
+ G++ ++ K M + +++ G+++ AR +F++M ++ W+ MI
Sbjct: 94 EFKVGKVLHG-QVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTSMI 152
Query: 200 KVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFD 259
Y + E + L+ M+++G + ++ +++S CA L L G ++H+ +
Sbjct: 153 SGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMDMK 212
Query: 260 VDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEM 319
+ + S L+ MY KCG+L + +FD + KD+ W+++I GY + ++L++F E+
Sbjct: 213 ICAVLGSALVNMYAKCGDLKTARQVFDKLSDKDVYAWSALIFGYVKNNRSTEALQLFREV 272
Query: 320 F-SSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYA----CMVDLL 374
S + P++VT++ V+SAC+ G ++ GR + + Y+ + H ++D+
Sbjct: 273 AGGSNMRPNEVTILAVISACAQLGDLETGRWVHD-----YITRTQKGHSVSLNNSLIDMF 327
Query: 375 GRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQ---LEP 427
+ G ++ A ++ ++M ++ D I W S++ H L +A +L+Q L+P
Sbjct: 328 SKCGDIDAAKRIFDSMSYK-DLISWNSMVNGFALH-GLGREALAQFRLMQTTDLQP 381
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 128/270 (47%), Gaps = 17/270 (6%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV----VSWTVMLGGFIRDSRIDDA 56
M RN V WT+M+ GY++ EA L+ +M E V+ ++ +
Sbjct: 140 MGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVG 199
Query: 57 RRLFDMMPEKDV----VAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+L + E D+ V + +V Y + G + R++FD++ K+V +W+ +I GYV N
Sbjct: 200 MKLHSHIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDKLSDKDVYAWSALIFGYVKN 259
Query: 113 NRIDVARKLFEVMP-----EKNEVSWTAMLMGYTQCGRIQDA-W---ELFKAMPMKSVVA 163
NR A +LF + NEV+ A++ Q G ++ W + + SV
Sbjct: 260 NRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSL 319
Query: 164 SNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGV 223
+NS+I + G++ A+ +FD M KD +W+ M+ + G E + F LMQ +
Sbjct: 320 NNSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGFALHGLGREALAQFRLMQTTDL 379
Query: 224 RVNFPSLISVLSVCASLASLDHGRQVHAQL 253
+ + + I VL+ C+ + G+++ ++
Sbjct: 380 QPDEITFIGVLTACSHAGLVQEGKKLFYEI 409
>gi|62320406|dbj|BAD94843.1| putative protein [Arabidopsis thaliana]
Length = 720
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 238/621 (38%), Positives = 365/621 (58%), Gaps = 26/621 (4%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM----PEKNVVSWTVMLGGFIRDSRIDDA 56
M ER+V+SW +++ GYV G+ + ++F QM E ++ + + G DSR+
Sbjct: 105 MTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAG-CADSRLISL 163
Query: 57 RRLFDMMPEKDVVAQ----TNMVLG-YCQDGRVDEGREIFDEMPKKNVISWTTMISGYVN 111
R + K ++ N +L Y + G +D + +F EM ++V+S+T+MI+GY
Sbjct: 164 GRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAR 223
Query: 112 NNRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRI------QDAWELFKAMPMK-S 160
A KLFE M E+ + + TA+L C R + E K +
Sbjct: 224 EGLAGEAVKLFEEMEEEGISPDVYTVTAVL---NCCARYRLLDEGKRVHEWIKENDLGFD 280
Query: 161 VVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQK 220
+ SN+++ + G +Q+A +VF +MR KD +W+ +I Y + Y E + LF L+ +
Sbjct: 281 IFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLE 340
Query: 221 EG-VRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELV 279
E + ++ VL CASL++ D GR++H ++R + D +VA+ L+ MY KCG L+
Sbjct: 341 EKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALL 400
Query: 280 KGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACS 339
++FD+ ASKD+V W +I+GY +G G++++ +F++M +G+ D+++ V +L ACS
Sbjct: 401 LAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACS 460
Query: 340 YTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIW 399
++G V EG F M+ + +EP EHYAC+VD+L R G + A + IE MP PDA IW
Sbjct: 461 HSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIW 520
Query: 400 GSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKR 459
G+LL CR H + LAE A+K+ +LEP+N G Y+L++NIYA ++ V LRK + +R
Sbjct: 521 GALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQR 580
Query: 460 NVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHD 519
+ K PGCSWIE++ +V++F D S+PE I L K+ + E GY P + + L D
Sbjct: 581 GLRKNPGCSWIEIKGRVNIFVAGDS-SNPETENIEAFLRKVRARMIEEGYSPLTKYALID 639
Query: 520 VDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREII 579
+E EK +L HSEKLA+A G++ G IRV KNLRVCGDCH K +SK+ REI+
Sbjct: 640 AEEMEKEEALCGHSEKLAMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIV 699
Query: 580 LRDANRFHHFKDGLCSCRDYW 600
LRD+NRFH FKDG CSCR +W
Sbjct: 700 LRDSNRFHQFKDGHCSCRGFW 720
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 94/355 (26%), Positives = 185/355 (52%), Gaps = 14/355 (3%)
Query: 65 EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLF-E 123
E++ V + +V Y ++ RVD R++FDEM +++VISW ++I+GYV+N + +F +
Sbjct: 77 ERNSVGNS-LVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQ 135
Query: 124 VMPEKNEVSWTAMLMGYTQCG--RIQDAWELFKAMPMKSVVA-----SNSMILGLGQNGE 176
++ E+ ++ + C R+ ++ +K+ + N+++ + G+
Sbjct: 136 MLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGD 195
Query: 177 VQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSV 236
+ A+ VF +M ++ +++ MI Y R+G E + LF M++EG+ + ++ +VL+
Sbjct: 196 LDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNC 255
Query: 237 CASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMW 296
CA LD G++VH + D++V++ L+ MY KCG + + +L+F KDI+ W
Sbjct: 256 CARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISW 315
Query: 297 NSIISGYAQYGLGEKSLKVFHEMFSSG-VMPDDVTLVGVLSACSYTGKVKEGREIFES-M 354
N+II GY++ ++L +F+ + PD+ T+ VL AC+ +GREI M
Sbjct: 316 NTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIM 375
Query: 355 KSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTH 409
++ Y + + +VD+ + G + A L + + D + W ++ H
Sbjct: 376 RNGYFSDRHVAN--SLVDMYAKCGALLLAHMLFDDIA-SKDLVSWTVMIAGYGMH 427
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 90/354 (25%), Positives = 166/354 (46%), Gaps = 20/354 (5%)
Query: 91 FDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVM----PEKNEVSWTAMLMGYTQCGRI 146
FDE+ + + W +++ + + LF+ M E + +++ + ++ +
Sbjct: 1 FDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSV 60
Query: 147 QDAWEL----FKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVY 202
+L K+ + NS++ +N V AR VFD+M E+D +W+ +I Y
Sbjct: 61 HGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGY 120
Query: 203 ERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDV 262
G + + +F M G+ ++ +++SV + CA + GR VH+ V+ F +
Sbjct: 121 VSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSRED 180
Query: 263 YVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSS 322
+ L+ MY KCG+L K +F + + +V + S+I+GYA+ GL +++K+F EM
Sbjct: 181 RFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEE 240
Query: 323 GVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVED 382
G+ PD T+ VL+ C+ + EG+ + E +K L A M D+ + G +++
Sbjct: 241 GISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALM-DMYAKCGSMQE 299
Query: 383 AMKLIEAMPFEPDAIIWGSLLGA----CRTHMKLDLAEVAAKKLLQLEPKNAGP 432
A + M + D I W +++G C + L L L LE K P
Sbjct: 300 AELVFSEMRVK-DIISWNTIIGGYSKNCYANEALSLFN------LLLEEKRFSP 346
>gi|15234006|ref|NP_193610.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206861|sp|Q9SN39.1|PP320_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g18750, chloroplastic; Flags: Precursor
gi|4539394|emb|CAB37460.1| putative protein [Arabidopsis thaliana]
gi|7268669|emb|CAB78877.1| putative protein [Arabidopsis thaliana]
gi|332658686|gb|AEE84086.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 871
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 238/621 (38%), Positives = 365/621 (58%), Gaps = 26/621 (4%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM----PEKNVVSWTVMLGGFIRDSRIDDA 56
M ER+V+SW +++ GYV G+ + ++F QM E ++ + + G DSR+
Sbjct: 256 MTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAG-CADSRLISL 314
Query: 57 RRLFDMMPEKDVVAQ----TNMVLG-YCQDGRVDEGREIFDEMPKKNVISWTTMISGYVN 111
R + K ++ N +L Y + G +D + +F EM ++V+S+T+MI+GY
Sbjct: 315 GRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAR 374
Query: 112 NNRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRI------QDAWELFKAMPMK-S 160
A KLFE M E+ + + TA+L C R + E K +
Sbjct: 375 EGLAGEAVKLFEEMEEEGISPDVYTVTAVL---NCCARYRLLDEGKRVHEWIKENDLGFD 431
Query: 161 VVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQK 220
+ SN+++ + G +Q+A +VF +MR KD +W+ +I Y + Y E + LF L+ +
Sbjct: 432 IFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLE 491
Query: 221 EG-VRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELV 279
E + ++ VL CASL++ D GR++H ++R + D +VA+ L+ MY KCG L+
Sbjct: 492 EKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALL 551
Query: 280 KGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACS 339
++FD+ ASKD+V W +I+GY +G G++++ +F++M +G+ D+++ V +L ACS
Sbjct: 552 LAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACS 611
Query: 340 YTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIW 399
++G V EG F M+ + +EP EHYAC+VD+L R G + A + IE MP PDA IW
Sbjct: 612 HSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIW 671
Query: 400 GSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKR 459
G+LL CR H + LAE A+K+ +LEP+N G Y+L++NIYA ++ V LRK + +R
Sbjct: 672 GALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQR 731
Query: 460 NVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHD 519
+ K PGCSWIE++ +V++F D S+PE I L K+ + E GY P + + L D
Sbjct: 732 GLRKNPGCSWIEIKGRVNIFVAGDS-SNPETENIEAFLRKVRARMIEEGYSPLTKYALID 790
Query: 520 VDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREII 579
+E EK +L HSEKLA+A G++ G IRV KNLRVCGDCH K +SK+ REI+
Sbjct: 791 AEEMEKEEALCGHSEKLAMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIV 850
Query: 580 LRDANRFHHFKDGLCSCRDYW 600
LRD+NRFH FKDG CSCR +W
Sbjct: 851 LRDSNRFHQFKDGHCSCRGFW 871
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 108/452 (23%), Positives = 203/452 (44%), Gaps = 34/452 (7%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLF-----WQMPEKNVVSWTVMLGGFIRDSR-IDDA 56
+R+V +R + E G + A L W + + + S + DS+ + D
Sbjct: 58 DRSVTDANTQLRRFCESGNLENAVKLLCVSGKWDIDPRTLCSVLQLCA----DSKSLKDG 113
Query: 57 RRLFDMMPEKDVVAQTNM----VLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+ + + + V +N+ L Y G + E +FDE+ + + W +++ +
Sbjct: 114 KEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKS 173
Query: 113 NRIDVARKLFEVM----PEKNEVSWTAMLMGYTQCGRIQDAWEL----FKAMPMKSVVAS 164
+ LF+ M E + +++ + ++ + +L K+ +
Sbjct: 174 GDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVG 233
Query: 165 NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVR 224
NS++ +N V AR VFD+M E+D +W+ +I Y G + + +F M G+
Sbjct: 234 NSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIE 293
Query: 225 VNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLI 284
++ +++SV + CA + GR VH+ V+ F + + L+ MY KCG+L K +
Sbjct: 294 IDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAV 353
Query: 285 FDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKV 344
F + + +V + S+I+GYA+ GL +++K+F EM G+ PD T+ VL+ C+ +
Sbjct: 354 FREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLL 413
Query: 345 KEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLG 404
EG+ + E +K L A M D+ + G +++A + M + D I W +++G
Sbjct: 414 DEGKRVHEWIKENDLGFDIFVSNALM-DMYAKCGSMQEAELVFSEMRVK-DIISWNTIIG 471
Query: 405 A----CRTHMKLDLAEVAAKKLLQLEPKNAGP 432
C + L L L LE K P
Sbjct: 472 GYSKNCYANEALSLFN------LLLEEKRFSP 497
>gi|357440191|ref|XP_003590373.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355479421|gb|AES60624.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 840
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 234/565 (41%), Positives = 334/565 (59%), Gaps = 34/565 (6%)
Query: 68 VVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFE---- 123
V +T +++ Y + + + +FDEMP++NV+SWT MIS Y A LF
Sbjct: 278 VFLRTRLIVLYTKCDSLGDAHNVFDEMPERNVVSWTAMISAYSQRGYASQALNLFFADVK 337
Query: 124 ---------------------VMPEKNEVSWTAMLMGYTQC-----GRIQDAWELFKAMP 157
V E NE ++ +L T GR Q + K
Sbjct: 338 ISLTGVYAIDKLKLSNPNRPWVCTEPNEFTFATVLTSCTSSLGFILGR-QIHSLIIKLNY 396
Query: 158 MKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTL 217
V +S++ ++G++ +AR VF+ + E+D + + +I Y + G + E ++LF
Sbjct: 397 EDHVFVGSSLLDMYAKDGKIHEARTVFECLPERDVVSCTAIISGYAQLGLDEEALELFRR 456
Query: 218 MQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGE 277
+Q EG++ N+ + VL+ + LA+LD G+QVH ++R + V + + LI MY KCG
Sbjct: 457 LQGEGMKSNYVTYTGVLTALSGLAALDLGKQVHNHVLRSEIPSFVVLQNSLIDMYSKCGN 516
Query: 278 LVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFS-SGVMPDDVTLVGVLS 336
L + IFD + ++ WN+++ GY+++G G + LK+F M + V PD VT++ VLS
Sbjct: 517 LTYSRRIFDTMYERTVISWNAMLVGYSKHGEGREVLKLFTLMREETKVKPDSVTILAVLS 576
Query: 337 ACSYTGKVKEGREIFESMKS-KYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPD 395
CS+ G +G IF M S K VEPK EHY C+VDLLGR+G+VE+A + I+ MPFEP
Sbjct: 577 GCSHGGLEDKGLNIFNDMSSGKIEVEPKMEHYGCVVDLLGRSGRVEEAFEFIKKMPFEPT 636
Query: 396 AIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKN 455
A IWGSLLGACR H +D+ E A ++LL++EP NAG Y++LSN+YAS GR+ DV+ LR
Sbjct: 637 AAIWGSLLGACRVHSNVDIGEFAGQQLLEIEPGNAGNYVILSNLYASAGRWEDVSSLRDL 696
Query: 456 MRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSF 515
M K+ V K PG S IE+++ +H F D SHP I ++++ +E GY PD S
Sbjct: 697 MLKKTVTKEPGRSSIELDQVLHTFHASD-RSHPRREEICMKVKELSTSFKEVGYVPDLSC 755
Query: 516 VLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMG 575
VLHDVDEE+K L HSEKLA+++GL+ P VPIRV+KNLR+C DCH+ K ISKV G
Sbjct: 756 VLHDVDEEQKEKILLGHSEKLALSFGLIASPASVPIRVIKNLRICVDCHNFAKYISKVYG 815
Query: 576 REIILRDANRFHHFKDGLCSCRDYW 600
RE+ LRD NRFH G CSC DYW
Sbjct: 816 REVSLRDKNRFHRIVGGKCSCEDYW 840
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 139/283 (49%), Gaps = 31/283 (10%)
Query: 152 LFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEV 211
+ K + SV +I+ + + A VFD+M E++ +W+ MI Y ++GY +
Sbjct: 269 MIKTRYLPSVFLRTRLIVLYTKCDSLGDAHNVFDEMPERNVVSWTAMISAYSQRGYASQA 328
Query: 212 IDLFTLMQK---------EGVRVNFP------------SLISVLSVCASLASLDHGRQVH 250
++LF K + ++++ P + +VL+ C S GRQ+H
Sbjct: 329 LNLFFADVKISLTGVYAIDKLKLSNPNRPWVCTEPNEFTFATVLTSCTSSLGFILGRQIH 388
Query: 251 AQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGE 310
+ +++ ++ V+V S L+ MY K G++ + + +F+ +D+V +IISGYAQ GL E
Sbjct: 389 SLIIKLNYEDHVFVGSSLLDMYAKDGKIHEARTVFECLPERDVVSCTAIISGYAQLGLDE 448
Query: 311 KSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGRE----IFESMKSKYLVEPKTEH 366
++L++F + G+ + VT GVL+A S + G++ + S ++V +
Sbjct: 449 EALELFRRLQGEGMKSNYVTYTGVLTALSGLAALDLGKQVHNHVLRSEIPSFVVLQNS-- 506
Query: 367 YACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTH 409
++D+ + G + + ++ + M +E I W ++L H
Sbjct: 507 ---LIDMYSKCGNLTYSRRIFDTM-YERTVISWNAMLVGYSKH 545
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 142/301 (47%), Gaps = 42/301 (13%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLF-------------------------WQMPEK 35
MPERNVVSWTAM+ Y + G ++A LF W E
Sbjct: 304 MPERNVVSWTAMISAYSQRGYASQALNLFFADVKISLTGVYAIDKLKLSNPNRPWVCTEP 363
Query: 36 NVVSWTVMLG------GFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGRE 89
N ++ +L GFI +I + + E V ++++ Y +DG++ E R
Sbjct: 364 NEFTFATVLTSCTSSLGFILGRQIHSL--IIKLNYEDHVFVGSSLLDMYAKDGKIHEART 421
Query: 90 IFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMP----EKNEVSWTAMLMGYTQCGR 145
+F+ +P+++V+S T +ISGY + A +LF + + N V++T +L +
Sbjct: 422 VFECLPERDVVSCTAIISGYAQLGLDEEALELFRRLQGEGMKSNYVTYTGVLTALSGLAA 481
Query: 146 I----QDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKV 201
+ Q + ++ VV NS+I + G + +R +FD M E+ +W+ M+
Sbjct: 482 LDLGKQVHNHVLRSEIPSFVVLQNSLIDMYSKCGNLTYSRRIFDTMYERTVISWNAMLVG 541
Query: 202 YERKGYELEVIDLFTLMQKEG-VRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDV 260
Y + G EV+ LFTLM++E V+ + ++++VLS C+ D G + + + +V
Sbjct: 542 YSKHGEGREVLKLFTLMREETKVKPDSVTILAVLSGCSHGGLEDKGLNIFNDMSSGKIEV 601
Query: 261 D 261
+
Sbjct: 602 E 602
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 110/230 (47%), Gaps = 26/230 (11%)
Query: 218 MQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGE 277
M G + F + ++L+ C + + G++VHA +++ ++ V++ + LI +Y KC
Sbjct: 234 MALHGFNMKFENYNAILNECVNKRAFREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDS 293
Query: 278 LVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFH---EMFSSGVM--------- 325
L +FD +++V W ++IS Y+Q G ++L +F ++ +GV
Sbjct: 294 LGDAHNVFDEMPERNVVSWTAMISAYSQRGYASQALNLFFADVKISLTGVYAIDKLKLSN 353
Query: 326 ---------PDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGR 376
P++ T VL++C+ + GR+I S+ K E + ++D+ +
Sbjct: 354 PNRPWVCTEPNEFTFATVLTSCTSSLGFILGRQI-HSLIIKLNYEDHVFVGSSLLDMYAK 412
Query: 377 AGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLE 426
G++ +A + E +P E D + +++ + +L L E A + +L+
Sbjct: 413 DGKIHEARTVFECLP-ERDVVSCTAIISG---YAQLGLDEEALELFRRLQ 458
>gi|356510758|ref|XP_003524101.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Glycine max]
Length = 854
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 225/540 (41%), Positives = 336/540 (62%), Gaps = 19/540 (3%)
Query: 72 TNMVLG-YCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFE------V 124
TN+++ Y + ++E + +FD+MP++NV+SWTTMIS Y N D A +L V
Sbjct: 323 TNILINMYVKFNLLEEAQVLFDKMPERNVVSWTTMISAYSNAQLNDRAMRLLAFMFRDGV 382
Query: 125 MPEKNEVSWTAMLMGYTQCGRIQDAWEL----FKAMPMKSVVASNSMILGLGQNGEVQKA 180
MP N +++++L C R+ D +L K V +++I + GE+ +A
Sbjct: 383 MP--NMFTFSSVLRA---CERLYDLKQLHSWIMKVGLESDVFVRSALIDVYSKMGELLEA 437
Query: 181 RVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASL 240
VF +M D W+ +I + + E + L+ M++ G + +L SVL C SL
Sbjct: 438 LKVFREMMTGDSVVWNSIIAAFAQHSDGDEALHLYKSMRRVGFPADQSTLTSVLRACTSL 497
Query: 241 ASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSII 300
+ L+ GRQ H +++ FD D+ + + L+ MY KCG L K IF+ A KD++ W+++I
Sbjct: 498 SLLELGRQAHVHVLK--FDQDLILNNALLDMYCKCGSLEDAKFIFNRMAKKDVISWSTMI 555
Query: 301 SGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLV 360
+G AQ G ++L +F M G P+ +T++GVL ACS+ G V EG F SM + Y +
Sbjct: 556 AGLAQNGFSMEALNLFESMKVQGPKPNHITILGVLFACSHAGLVNEGWYYFRSMNNLYGI 615
Query: 361 EPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAK 420
+P EHY CM+DLLGRA +++D +KLI M EPD + W +LL ACR +DLA AAK
Sbjct: 616 DPGREHYGCMLDLLGRAEKLDDMVKLIHEMNCEPDVVTWRTLLDACRARQNVDLATYAAK 675
Query: 421 KLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFT 480
++L+L+P++ G Y+LLSNIYA R++DVAE+R+ M+KR + K PGCSWIEV K++H F
Sbjct: 676 EILKLDPQDTGAYVLLSNIYAISKRWNDVAEVRRTMKKRGIRKEPGCSWIEVNKQIHAFI 735
Query: 481 GRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAY 540
D SHP+ I R L + L AGY PD++FVL D++ E++ SLRYHSEKLA+ +
Sbjct: 736 LGD-KSHPQIDEINRQLNQFICRLAGAGYVPDTNFVLQDLEGEQREDSLRYHSEKLAIVF 794
Query: 541 GLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
G++ P+ IR+ KNL++CGDCH KLI+++ R I++RD R+HHF+DG+CSC DYW
Sbjct: 795 GIMSFPKEKTIRIWKNLKICGDCHKFAKLIAELEQRHIVIRDPIRYHHFQDGVCSCGDYW 854
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 101/198 (51%), Gaps = 5/198 (2%)
Query: 218 MQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGE 277
M++ GV + + ++ C + ++ G++VH + + ++ ++LI MY+K
Sbjct: 276 MERRGVWADSITYSELIKCCLAHGAVREGKRVHRHIFSNGYHPKTFLTNILINMYVKFNL 335
Query: 278 LVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSA 337
L + +++FD +++V W ++IS Y+ L ++++++ MF GVMP+ T VL A
Sbjct: 336 LEEAQVLFDKMPERNVVSWTTMISAYSNAQLNDRAMRLLAFMFRDGVMPNMFTFSSVLRA 395
Query: 338 CSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAI 397
C +K+ S K +E + ++D+ + G++ +A+K+ M D++
Sbjct: 396 CERLYDLKQ----LHSWIMKVGLESDVFVRSALIDVYSKMGELLEALKVFREM-MTGDSV 450
Query: 398 IWGSLLGACRTHMKLDLA 415
+W S++ A H D A
Sbjct: 451 VWNSIIAAFAQHSDGDEA 468
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 129/277 (46%), Gaps = 42/277 (15%)
Query: 12 MVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF------DMMP- 64
++ YV+ ++ EA LF +MPE+NVVSWT M+ + D A RL +MP
Sbjct: 326 LINMYVKFNLLEEAQVLFDKMPERNVVSWTTMISAYSNAQLNDRAMRLLAFMFRDGVMPN 385
Query: 65 -----------------------------EKDVVAQTNMVLGYCQDGRVDEGREIFDEMP 95
E DV ++ ++ Y + G + E ++F EM
Sbjct: 386 MFTFSSVLRACERLYDLKQLHSWIMKVGLESDVFVRSALIDVYSKMGELLEALKVFREMM 445
Query: 96 KKNVISWTTMISGYVNNNRIDVARKLFEVMPE----KNEVSWTAMLMGYTQCGRIQDAWE 151
+ + W ++I+ + ++ D A L++ M ++ + T++L T ++ +
Sbjct: 446 TGDSVVWNSIIAAFAQHSDGDEALHLYKSMRRVGFPADQSTLTSVLRACTSLSLLELGRQ 505
Query: 152 LFKAMPM--KSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYEL 209
+ + ++ +N+++ + G ++ A+ +F++M +KD +WS MI + G+ +
Sbjct: 506 AHVHVLKFDQDLILNNALLDMYCKCGSLEDAKFIFNRMAKKDVISWSTMIAGLAQNGFSM 565
Query: 210 EVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHG 246
E ++LF M+ +G + N +++ VL C+ ++ G
Sbjct: 566 EALNLFESMKVQGPKPNHITILGVLFACSHAGLVNEG 602
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 85/195 (43%), Gaps = 41/195 (21%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDM 62
E +V +A++ Y + G + EA +F +M + V W ++ F + S D+A L+
Sbjct: 415 ESDVFVRSALIDVYSKMGELLEALKVFREMMTGDSVVWNSIIAAFAQHSDGDEALHLYKS 474
Query: 63 MP-------------------------------------EKDVVAQTNMVLGYCQDGRVD 85
M ++D++ ++ YC+ G ++
Sbjct: 475 MRRVGFPADQSTLTSVLRACTSLSLLELGRQAHVHVLKFDQDLILNNALLDMYCKCGSLE 534
Query: 86 EGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVM----PEKNEVSWTAMLMGYT 141
+ + IF+ M KK+VISW+TMI+G N A LFE M P+ N ++ +L +
Sbjct: 535 DAKFIFNRMAKKDVISWSTMIAGLAQNGFSMEALNLFESMKVQGPKPNHITILGVLFACS 594
Query: 142 QCGRIQDAWELFKAM 156
G + + W F++M
Sbjct: 595 HAGLVNEGWYYFRSM 609
>gi|302780040|ref|XP_002971795.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
gi|300160927|gb|EFJ27544.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
Length = 782
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 232/617 (37%), Positives = 367/617 (59%), Gaps = 18/617 (2%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVML----GGFIRDSRIDDA 56
+ R+VVSWTAM+ V+ A L+ +M VV + L + + +
Sbjct: 167 LEHRDVVSWTAMIAACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPHYLSEG 226
Query: 57 RRLFDMMP----EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+ ++ ++ E DV + + + G + + R +F++M ++V++W +I+ YV N
Sbjct: 227 KFIYSLVSSRVMESDVRVMNSAMNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITFYVQN 286
Query: 113 NRIDVARKLFEVMPE----KNEVSWTAMLMGYTQCGRIQDA---WELFK-AMPMKSVVAS 164
A +LF + + N++++ ML YT + EL K A + VV +
Sbjct: 287 ENFGEAVRLFGRLQQDGIKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDVVVA 346
Query: 165 NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVR 224
+++ G+ +A +F M KD TW+ M Y + G+ E + LF MQ EG R
Sbjct: 347 TALMSLYGRCEAPGQAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRR 406
Query: 225 VNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLI 284
+L++VL CA LA+L GRQ+H+ ++ F +++ V + LI MY KCG++ + + +
Sbjct: 407 PTSATLVAVLDTCAHLAALQKGRQIHSHIIENGFRMEMVVETALINMYGKCGKMAEARSV 466
Query: 285 FDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKV 344
F+ A +DI++WNS++ YAQ+G +++L++F++M G D V+ V VLSA S++G V
Sbjct: 467 FEKMAKRDILVWNSMLGAYAQHGYYDETLQLFNQMQLDGEKADAVSFVSVLSALSHSGSV 526
Query: 345 KEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMP-FEPDAIIWGSLL 403
+G + F +M + + P E Y C+VDLLGRAG++++A+ ++ + PD I+W +LL
Sbjct: 527 TDGYQYFVAMLQDFSITPTPELYGCVVDLLGRAGRIQEAVDIVLKLSGCLPDGILWMTLL 586
Query: 404 GACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIK 463
GACRTH K D A+ AA+++L+ +P ++G Y++LSN+YA+ G + V +RK MR R V K
Sbjct: 587 GACRTHNKTDQAKAAAEQVLERDPSHSGAYVVLSNVYAAAGDWDGVNRMRKLMRSRGVKK 646
Query: 464 PPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEE 523
PG S IE+ +VH F D SHP I L+ + +R AGY PD+ +LHDV++E
Sbjct: 647 EPGRSSIEILNRVHEFLEGD-RSHPRRHPIYAELDVLNSEMRAAGYIPDTKMILHDVEDE 705
Query: 524 EKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDA 583
K L YHSE+LA+A+GL+ P G P+RV+KNLRVC DCH+A K ISK+ GREI++RD
Sbjct: 706 RKEDMLFYHSERLAIAFGLMSTPPGTPLRVIKNLRVCSDCHTATKYISKLRGREILVRDT 765
Query: 584 NRFHHFKDGLCSCRDYW 600
+RFH+FKDG CSC+DYW
Sbjct: 766 HRFHNFKDGRCSCKDYW 782
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 115/430 (26%), Positives = 217/430 (50%), Gaps = 20/430 (4%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV----VSWTVMLGGFIRDSRIDDA 56
+ ++V +WT M+ Y ++G A +F+QM E++V V++ +L + D
Sbjct: 66 LERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESLKDG 125
Query: 57 RRLFDMMP----EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+ + E DV T ++ Y + G V + F + ++V+SWT MI+ V +
Sbjct: 126 MEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAACVQH 185
Query: 113 NRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDA---WELFKAMPMKS-VVAS 164
++ +AR L+ M N+++ + Y + + + L + M+S V
Sbjct: 186 DQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPHYLSEGKFIYSLVSSRVMESDVRVM 245
Query: 165 NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVR 224
NS + G G + AR +F+ M ++D TW+ +I Y + E + LF +Q++G++
Sbjct: 246 NSAMNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITFYVQNENFGEAVRLFGRLQQDGIK 305
Query: 225 VNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLI 284
N + + +L+V SL SL G+ +H + +D DV VA+ L+++Y +C + I
Sbjct: 306 ANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDVVVATALMSLYGRCEAPGQAWKI 365
Query: 285 FDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKV 344
F + SKD++ W + YAQ G +++L++F EM G P TLV VL C++ +
Sbjct: 366 FVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTCAHLAAL 425
Query: 345 KEGREIFES-MKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
++GR+I +++ + +E E ++++ G+ G++ +A + E M + D ++W S+L
Sbjct: 426 QKGRQIHSHIIENGFRMEMVVE--TALINMYGKCGKMAEARSVFEKMA-KRDILVWNSML 482
Query: 404 GACRTHMKLD 413
GA H D
Sbjct: 483 GAYAQHGYYD 492
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 138/277 (49%), Gaps = 3/277 (1%)
Query: 167 MILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVN 226
+I Q G V +A+ VF+ + KD W+ MI +Y ++G + +F MQ+E V
Sbjct: 46 LIQMYAQCGSVPEAQQVFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPT 105
Query: 227 FPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFD 286
+ +++L+ CAS SL G ++H Q+++ F+ DV+V + LI MY KCG + F
Sbjct: 106 KVTYVAILNACASTESLKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFK 165
Query: 287 NFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKE 346
+D+V W ++I+ Q+ + ++ M GV+P+ +TL V +A + E
Sbjct: 166 RLEHRDVVSWTAMIAACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPHYLSE 225
Query: 347 GREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGAC 406
G+ I+ S+ S ++E +++ G AG + DA +L E M + D + W ++
Sbjct: 226 GKFIY-SLVSSRVMESDVRVMNSAMNMFGNAGLLGDARRLFEDM-VDRDVVTWNIVITFY 283
Query: 407 RTHMKLDLAEVAAKKLLQLEPK-NAGPYILLSNIYAS 442
+ A +L Q K N ++L+ N+Y S
Sbjct: 284 VQNENFGEAVRLFGRLQQDGIKANDITFVLMLNVYTS 320
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 114/227 (50%), Gaps = 16/227 (7%)
Query: 230 LISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFA 289
+++L C+S ++DHGR+VH + F+ + V LI MY +CG + + + +F+
Sbjct: 8 FVALLQRCSSAKNVDHGRRVHWHVCDRGFEQNNLVCGHLIQMYAQCGSVPEAQQVFEILE 67
Query: 290 SKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGRE 349
KD+ W +I Y Q G +++L +F++M VMP VT V +L+AC+ T +K+G E
Sbjct: 68 RKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESLKDGME 127
Query: 350 IFESMKSKYLVEPKTEHYACMVDLLGRAGQVE---DAMKLIEAMPFEPDAIIWGSLLGAC 406
I + + E ++++ + G V D+ K +E D + W +++ AC
Sbjct: 128 IHGQILQQGF-EGDVFVGTALINMYNKCGSVRGAWDSFKRLE----HRDVVSWTAMIAAC 182
Query: 407 RTHMKLDLAEVAAKKLLQLE---PKNAGPYILLSNI----YASQGRF 446
H + LA ++ +QL+ P Y + + Y S+G+F
Sbjct: 183 VQHDQFALARWLYRR-MQLDGVVPNKITLYTVFNAYGDPHYLSEGKF 228
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 140/300 (46%), Gaps = 17/300 (5%)
Query: 71 QTNMVLG-----YCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLF--- 122
Q N+V G Y Q G V E +++F+ + +K+V +WT MI Y D A +F
Sbjct: 38 QNNLVCGHLIQMYAQCGSVPEAQQVFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQM 97
Query: 123 ---EVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKS----VVASNSMILGLGQNG 175
+VMP K V++ A+L ++D E+ + + V ++I + G
Sbjct: 98 QEEDVMPTK--VTYVAILNACASTESLKDGMEIHGQILQQGFEGDVFVGTALINMYNKCG 155
Query: 176 EVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLS 235
V+ A F ++ +D +W+ MI + L+ MQ +GV N +L +V +
Sbjct: 156 SVRGAWDSFKRLEHRDVVSWTAMIAACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFN 215
Query: 236 VCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVM 295
L G+ +++ + + DV V + + M+ G L + +F++ +D+V
Sbjct: 216 AYGDPHYLSEGKFIYSLVSSRVMESDVRVMNSAMNMFGNAGLLGDARRLFEDMVDRDVVT 275
Query: 296 WNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMK 355
WN +I+ Y Q +++++F + G+ +D+T V +L+ + + +G+ I E +K
Sbjct: 276 WNIVITFYVQNENFGEAVRLFGRLQQDGIKANDITFVLMLNVYTSLTSLAKGKVIHELVK 335
>gi|449523810|ref|XP_004168916.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At2g01510-like [Cucumis
sativus]
Length = 816
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 248/719 (34%), Positives = 379/719 (52%), Gaps = 121/719 (16%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMP----EKNVVSWTVMLGGF--------- 47
M ER VSWT ++ GY++ EA L+ M E + V+ +L GF
Sbjct: 100 MVERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSGFGELETKNVI 159
Query: 48 -----------------IRDSRIDD---------ARRLFDMMPEKDVVAQTNMVLGYCQD 81
+ +S +D A +LF M KD V +++ GY +
Sbjct: 160 VQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNE 219
Query: 82 GRVDEGREIFDEMPKK---------------------------------------NVISW 102
G +E E+F E+ NV
Sbjct: 220 GLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVG 279
Query: 103 TTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAM------ 156
++ Y ++++D KLF MPE + +S+ ++ Y G+ +++++LF+ +
Sbjct: 280 NALLDYYSKHDQVDEVGKLFXEMPELDGISYNVVITSYAWNGQFKESFDLFRKLQFTRFD 339
Query: 157 ----PMKSV--VASNSMILGLGQ----------------------------NGEVQKARV 182
P ++ +A++S+ L +G+ NG+ ++A+
Sbjct: 340 RRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESRVENALVDMYAKCNGD-KEAQK 398
Query: 183 VFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLAS 242
+FD + K W+ MI Y +KG E I++F+ M++ GV + + S+L CA+LAS
Sbjct: 399 IFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLAS 458
Query: 243 LDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISG 302
+ GRQ+H+ L+R F +VY S L+ Y KCG + F ++ V WN++IS
Sbjct: 459 ISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVSWNALISA 518
Query: 303 YAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEP 362
YAQ G + +L F +M SG PD V+ + VLSACS+ G V+E F SM Y V P
Sbjct: 519 YAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSACSHCGFVEEALWHFNSMTQIYEVTP 578
Query: 363 KTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKL 422
K EHY MVD+L R G+ ++A KL+ MPFEP I+W S+L +CR H +LA+ AA +L
Sbjct: 579 KREHYTSMVDVLCRNGRFDEAEKLMTEMPFEPSEIMWSSVLNSCRIHKNHELAKKAADRL 638
Query: 423 LQLEP-KNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTG 481
+E ++A PYI +SNIYA G++ +VA+++K MR R V K P SW+E++ + H+F+
Sbjct: 639 FNMEDLRDAAPYINMSNIYAVAGQWDNVAKVKKAMRDRGVRKVPAYSWVEIKHQTHVFSA 698
Query: 482 RDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYG 541
D SHPE I+R + + + + GY PD++ LHDVDE K+ SL+YHSE+ A+A+
Sbjct: 699 ND-KSHPEMKKILRKINALSKEMEKKGYKPDTTCALHDVDEVIKIESLKYHSERFAIAFA 757
Query: 542 LVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
L+ P+G PI VMKNLR C DCH+AIK+IS+++ REII+RD++RFHHFKDG+CSC DYW
Sbjct: 758 LMNTPDGSPIVVMKNLRACTDCHAAIKVISQIVEREIIVRDSSRFHHFKDGVCSCGDYW 816
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 117/473 (24%), Positives = 225/473 (47%), Gaps = 53/473 (11%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MP +N +S M+ G+++ G +++A LF M E+ VSWT+++GG+++ ++ +A RL+
Sbjct: 69 MPAKNTISLNMMISGHLKFGKLSKARELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLY 128
Query: 61 DMMP----EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPK----KNVISWTTMISGYVNN 112
M E D V ++ G+ + + +I + K N++ +++ Y
Sbjct: 129 ADMRRGGIEPDYVTLVTLLSGFGELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKT 188
Query: 113 NRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELF------------------- 153
+ + +A +LF+ M K+ V++ +++ GY+ G ++A ELF
Sbjct: 189 HCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALL 248
Query: 154 --------------------KAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDA 193
K + +V N+++ ++ +V + +F +M E D
Sbjct: 249 SAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFXEMPELDGI 308
Query: 194 TWSGMIKVYERKGYELEVIDLFTLMQKEGV-RVNFPSLISVLSVCASLASLDHGRQVHAQ 252
+++ +I Y G E DLF +Q R FP ++LS+ S +L GRQ+H Q
Sbjct: 309 SYNVVITSYAWNGQFKESFDLFRKLQFTRFDRRQFP-FATLLSIATSSLNLRMGRQIHCQ 367
Query: 253 LVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKS 312
+ + + V + L+ MY KC + + IFDN A K V W ++IS Y Q G E+
Sbjct: 368 AITVGANFESRVENALVDMYAKCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEG 427
Query: 313 LKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESM-KSKYLVEPKTEHYACMV 371
+ VF +M +GV D T +L AC+ + GR++ + +S ++ + + ++
Sbjct: 428 INVFSDMRRTGVPADQATFASILRACANLASISLGRQLHSLLIRSGFMSNVYSG--SALL 485
Query: 372 DLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQ 424
D + G + DA+K MP E +++ W +L+ A + +D + ++++Q
Sbjct: 486 DTYAKCGCMTDAIKSFGEMP-ERNSVSWNALISAYAQNGNVDGTLNSFQQMIQ 537
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 83/379 (21%), Positives = 181/379 (47%), Gaps = 12/379 (3%)
Query: 36 NVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMP 95
N + F+ + A ++FD MP K+ ++ M+ G+ + G++ + RE+FD M
Sbjct: 42 NTCRSNFQVNNFLERGDLVHAHQVFDQMPAKNTISLNMMISGHLKFGKLSKARELFDGMV 101
Query: 96 KKNVISWTTMISGYVNNNRIDVARKLFEVMP----EKNEVSWTAMLMGY----TQCGRIQ 147
++ +SWT +I GY+ +N+ A +L+ M E + V+ +L G+ T+ +Q
Sbjct: 102 ERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSGFGELETKNVIVQ 161
Query: 148 DAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGY 207
+ K +++ NS++ + + A +F M KD T++ ++ Y +G
Sbjct: 162 IHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGL 221
Query: 208 ELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASV 267
E I+LF + G++ + + ++LS L G+QVH +++ F +V+V +
Sbjct: 222 NEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGNA 281
Query: 268 LITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPD 327
L+ Y K ++ + +F D + +N +I+ YA G ++S +F ++ +
Sbjct: 282 LLDYYSKHDQVDEVGKLFXEMPELDGISYNVVITSYAWNGQFKESFDLFRKLQFTRFDRR 341
Query: 328 DVTLVGVLSACSYTGKVKEGREIF-ESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKL 386
+LS + + ++ GR+I +++ E + E+ +VD+ + ++A K+
Sbjct: 342 QFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESRVEN--ALVDMYAKCNGDKEAQKI 399
Query: 387 IEAMPFEPDAIIWGSLLGA 405
+ + + + W +++ A
Sbjct: 400 FDNIACK-STVPWTAMISA 417
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 104/218 (47%), Gaps = 19/218 (8%)
Query: 242 SLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIIS 301
SL+ + A +V+ F+ + ++ + +++ G+LV +FD +K+ + N +IS
Sbjct: 23 SLNSNHLIDAHIVKTGFNPNTCRSNFQVNNFLERGDLVHAHQVFDQMPAKNTISLNMMIS 82
Query: 302 GYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVE 361
G+ ++G K+ ++F M + + + G L + + KE ++ M+ + +E
Sbjct: 83 GHLKFGKLSKARELFDGMVERTAVSWTILIGGYLQ----SNQSKEAFRLYADMR-RGGIE 137
Query: 362 PKTEHYACMVDLLGRAGQVEDAMKLIE------AMPFEPDAIIWGSLLGA-CRTHMKLDL 414
P Y +V LL G++E +++ + +E + ++ SL+ A C+TH L L
Sbjct: 138 PD---YVTLVTLLSGFGELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHC-LYL 193
Query: 415 AEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAEL 452
A K +L K+ + L Y+++G + EL
Sbjct: 194 ASQLFKHMLN---KDTVTFNSLMTGYSNEGLNEEAIEL 228
>gi|259490042|ref|NP_001159140.1| hypothetical protein [Zea mays]
gi|223942207|gb|ACN25187.1| unknown [Zea mays]
gi|414585730|tpg|DAA36301.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
Length = 885
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 234/648 (36%), Positives = 365/648 (56%), Gaps = 60/648 (9%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV----VSWTVMLGGFIRDSRIDDA 56
MPER+VVSW MV + G + EA + M K V ++T L R S +
Sbjct: 250 MPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWG 309
Query: 57 RRLFDM----MPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
++L +P D + +V Y + G E + +F+ + +N ++WT +ISG++
Sbjct: 310 KQLHAQVIRNLPHIDPYVASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQY 369
Query: 113 NRIDVARKLFEVMPEK----NEVSWTAMLMG----------------------------- 139
+ +LF M + ++ + ++ G
Sbjct: 370 GCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVS 429
Query: 140 ------YTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDA 193
Y +C +Q A +F+ M K +V+ SMI Q G V KAR FD M EK+
Sbjct: 430 NSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSEKNVI 489
Query: 194 TWSGMIKVYERKGYELEVIDLFTLM-QKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQ 252
TW+ M+ Y + G E + + ++ +M +E VR ++ + +++ CA L + G Q+ +
Sbjct: 490 TWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQIIGR 549
Query: 253 LVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKS 312
V+ +D VA+ +ITMY KCG +++ + +FD KDIV WN++I+GY+Q+G+G+++
Sbjct: 550 TVKVGLIIDTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQA 609
Query: 313 LKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVD 372
+++F ++ G PD ++ V VLS CS++G V+EG+ F+ MK + + P EH++CMVD
Sbjct: 610 IEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGKFYFDMMKRAHNISPGLEHFSCMVD 669
Query: 373 LLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGP 432
LLGRAG + +A LI+ MP +P A +WG+LL AC+ H +LAE+AAK + +L+ ++G
Sbjct: 670 LLGRAGHLTEAKDLIDDMPMKPTAEVWGALLSACKIHGNNELAELAAKHVFELDSPDSGS 729
Query: 433 YILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPM 492
Y+L++ IYA G+ D A++RK MR + + K PG SW+EV+ KVH+F D VSHP+
Sbjct: 730 YMLMAKIYADAGKSDDSAQIRKLMRDKGIKKNPGYSWMEVDNKVHVFKADD-VSHPQVLA 788
Query: 493 IMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIR 552
I + L+++ + GY S ++H HSEKLAVA+GL+ LP +PI
Sbjct: 789 IRKKLDELMEKIARLGYVRTDS-------TRSEIH----HSEKLAVAFGLMTLPTWMPIH 837
Query: 553 VMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
+MKNLR+CGDCH+ IKLIS V GRE ++RDA RFHHF G CSC DYW
Sbjct: 838 IMKNLRICGDCHTVIKLISTVTGREFVIRDAVRFHHFNGGSCSCGDYW 885
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 113/441 (25%), Positives = 197/441 (44%), Gaps = 74/441 (16%)
Query: 41 TVMLGGFIRDSRIDDARRLFDM-MPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNV 99
+L ++ + DARRL M + +V+ M+ GY + GR+ + E+F MP ++V
Sbjct: 63 NTLLHAYLSCGALSDARRLLLMDIAHPNVITHNVMLNGYAKLGRLSDAVELFGRMPARDV 122
Query: 100 ISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSW-------------------------- 133
SW T++SGY + + V+ + F M + SW
Sbjct: 123 ASWNTLMSGYFQSRQYLVSLETFLSMHRSGD-SWPNAFTLACAMKSCGALGWHSLALQLL 181
Query: 134 ---------------TAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQ 178
A++ + +CG + A LF + ++ NSM+ G + V
Sbjct: 182 AMVQKFDSQDDSEVAAALVDMFVRCGAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVD 241
Query: 179 KARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCA 238
A +FD M E+D +W+ M+ + G E +D+ MQ +GVR++ + S L+ CA
Sbjct: 242 HALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACA 301
Query: 239 SLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNS 298
L+SL G+Q+HAQ++R +D YVAS L+ +Y K G + K +F++ ++ V W
Sbjct: 302 RLSSLRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTV 361
Query: 299 IISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFE------ 352
+ISG+ QYG +S+++F++M + + D L ++S C + GR++
Sbjct: 362 LISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSG 421
Query: 353 ------------SMKSK------------YLVEPKTEHYACMVDLLGRAGQVEDAMKLIE 388
SM +K ++ E + M+ + G V A + +
Sbjct: 422 QIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFD 481
Query: 389 AMPFEPDAIIWGSLLGACRTH 409
M E + I W ++LGA H
Sbjct: 482 GMS-EKNVITWNAMLGAYIQH 501
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 109/519 (21%), Positives = 223/519 (42%), Gaps = 119/519 (22%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRD-------------S 51
NV++ M+ GY + G +++A LF +MP ++V SW ++ G+ +
Sbjct: 90 NVITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLSMH 149
Query: 52 RIDDA-----------------------------RRLFDMMPEKDVVAQTNMVLGYCQDG 82
R D+ + FD + +V A +V + + G
Sbjct: 150 RSGDSWPNAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAA--LVDMFVRCG 207
Query: 83 RVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQ 142
VD +F + + + +M++GYV +D A +LF+ MPE++ VSW M+ +Q
Sbjct: 208 AVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQ 267
Query: 143 CGRIQDAWELFKAMPMKSV---------------------------------------VA 163
GR+++A ++ M K V
Sbjct: 268 SGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYV 327
Query: 164 SNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGV 223
+++++ ++G ++A+ VF+ + ++++ W+ +I + + G E ++LF M+ E +
Sbjct: 328 ASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELM 387
Query: 224 RVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKC-------- 275
++ +L +++S C S L GRQ+H+ ++ V V++ LI+MY KC
Sbjct: 388 TLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEA 447
Query: 276 -----------------------GELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKS 312
G + K + FD + K+++ WN+++ Y Q+G E
Sbjct: 448 IFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQHGAEEDG 507
Query: 313 LKVFHEMFSSG-VMPDDVTLVGVLSACSYTGKVKEGREIF-ESMKSKYLVEPKTEHYACM 370
L+++ M S V PD VT V + C+ G K G +I ++K +++ + +
Sbjct: 508 LRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVAN--AV 565
Query: 371 VDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTH 409
+ + + G++ +A K+ + + + D + W +++ H
Sbjct: 566 ITMYSKCGRILEARKVFDFLNVK-DIVSWNAMITGYSQH 603
>gi|356555301|ref|XP_003545972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 858
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 234/642 (36%), Positives = 365/642 (56%), Gaps = 52/642 (8%)
Query: 8 SWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKD 67
S A+V Y + G I A +F + +VVSW ++ G + D A L D M K
Sbjct: 220 SANALVDMYSKAGEIEGAVAVFQDIAHPDVVSWNAIIAGCVLHDCNDLALMLLDEM--KG 277
Query: 68 VVAQTNM-----VLGYCQD-GRVDEGREIFDEMPK----KNVISWTTMISGYVNNNRIDV 117
+ NM L C G + GR++ + K ++ + ++ Y +D
Sbjct: 278 SGTRPNMFTLSSALKACAAMGFKELGRQLHSSLIKMDAHSDLFAAVGLVDMYSKCEMMDD 337
Query: 118 ARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAM--------------------- 156
AR+ ++ MP+K+ ++W A++ GY+QCG DA LF M
Sbjct: 338 ARRAYDSMPKKDIIAWNALISGYSQCGDHLDAVSLFSKMFSEDIDFNQTTLSTVLKSVAS 397
Query: 157 -------------PMKSVVAS-----NSMILGLGQNGEVQKARVVFDQMREKDDATWSGM 198
+KS + S NS++ G+ + +A +F++ +D ++ M
Sbjct: 398 LQAIKVCKQIHTISIKSGIYSDFYVINSLLDTYGKCNHIDEASKIFEERTWEDLVAYTSM 457
Query: 199 IKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQF 258
I Y + G E + L+ MQ ++ + S+L+ CA+L++ + G+Q+H ++ F
Sbjct: 458 ITAYSQYGDGEEALKLYLQMQDADIKPDPFICSSLLNACANLSAYEQGKQLHVHAIKFGF 517
Query: 259 DVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHE 318
D++ ++ L+ MY KCG + F ++ IV W+++I GYAQ+G G+++L++F++
Sbjct: 518 MCDIFASNSLVNMYAKCGSIEDADRAFSEIPNRGIVSWSAMIGGYAQHGHGKEALRLFNQ 577
Query: 319 MFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAG 378
M GV P+ +TLV VL AC++ G V EG++ FE M+ + ++P EHYACM+DLLGR+G
Sbjct: 578 MLRDGVPPNHITLVSVLCACNHAGLVNEGKQYFEKMEVMFGIKPTQEHYACMIDLLGRSG 637
Query: 379 QVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSN 438
++ +A++L+ ++PFE D +WG+LLGA R H ++L + AAK L LEP+ +G ++LL+N
Sbjct: 638 KLNEAVELVNSIPFEADGFVWGALLGAARIHKNIELGQKAAKMLFDLEPEKSGTHVLLAN 697
Query: 439 IYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLE 498
IYAS G + +VA++RK M+ V K PG SWIE++ KV+ F D SH I L+
Sbjct: 698 IYASAGMWENVAKVRKFMKDSKVKKEPGMSWIEIKDKVYTFIVGD-RSHSRSDEIYAKLD 756
Query: 499 KIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLR 558
++G LL +AGY +H+VD+ EK L +HSEKLAVA+GL+ P G PIRV KNLR
Sbjct: 757 QLGDLLSKAGYSSIVEIDIHNVDKSEKEKLLYHHSEKLAVAFGLIATPPGGPIRVKKNLR 816
Query: 559 VCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
+C DCH+ K + K++ REII+RD NRFHHFKDG CSC DYW
Sbjct: 817 ICVDCHTFFKFVCKIVSREIIVRDINRFHHFKDGSCSCGDYW 858
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 115/454 (25%), Positives = 219/454 (48%), Gaps = 37/454 (8%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQM----PEKNVVSWTVMLGGFIRDSRIDDARR 58
E +VVSW++++ GYV+ G + EA +F +M + N ++ +L ++ R+
Sbjct: 44 ELDVVSWSSLLSGYVQNGFVEEALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRK 103
Query: 59 LFDMMP----EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNR 114
+ M E D +V+ Y + G +D+ R +F + ++NV+SW + S YV +
Sbjct: 104 VHGMAVVTGFESDGFVANTLVVMYAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSEL 163
Query: 115 IDVARKLFE------VMPEKNEVSWTAMLMGYTQCGRIQ--DAWELFKAMPMK-----SV 161
A LF+ +MP NE S + +L C +Q D + +K
Sbjct: 164 CGEAVGLFKEMVRSGIMP--NEFSISIIL---NACAGLQEGDLGRKIHGLMLKMGLDLDQ 218
Query: 162 VASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIK---VYERKGYELEVIDLFTLM 218
++N+++ + GE++ A VF + D +W+ +I +++ L ++D M
Sbjct: 219 FSANALVDMYSKAGEIEGAVAVFQDIAHPDVVSWNAIIAGCVLHDCNDLALMLLDE---M 275
Query: 219 QKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGEL 278
+ G R N +L S L CA++ + GRQ+H+ L++ D++ A L+ MY KC +
Sbjct: 276 KGSGTRPNMFTLSSALKACAAMGFKELGRQLHSSLIKMDAHSDLFAAVGLVDMYSKCEMM 335
Query: 279 VKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSAC 338
+ +D+ KDI+ WN++ISGY+Q G ++ +F +MFS + + TL VL +
Sbjct: 336 DDARRAYDSMPKKDIIAWNALISGYSQCGDHLDAVSLFSKMFSEDIDFNQTTLSTVLKSV 395
Query: 339 SYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAII 398
+ +K ++I ++ K + ++D G+ +++A K+ E +E D +
Sbjct: 396 ASLQAIKVCKQI-HTISIKSGIYSDFYVINSLLDTYGKCNHIDEASKIFEERTWE-DLVA 453
Query: 399 WGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGP 432
+ S++ A + + E A K LQ++ + P
Sbjct: 454 YTSMITA---YSQYGDGEEALKLYLQMQDADIKP 484
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 93/359 (25%), Positives = 180/359 (50%), Gaps = 19/359 (5%)
Query: 66 KDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVM 125
+D + ++V Y + R R++ DE + +V+SW++++SGYV N ++ A +F M
Sbjct: 14 RDPSLRNHLVTLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQNGFVEEALLVFNEM 73
Query: 126 ----PEKNEVSWTAMLMGYT-----QCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGE 176
+ NE ++ ++L + GR + VA N++++ + G
Sbjct: 74 CLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVA-NTLVVMYAKCGL 132
Query: 177 VQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSV 236
+ +R +F + E++ +W+ + Y + E + LF M + G+ N S+ +L+
Sbjct: 133 LDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSGIMPNEFSISIILNA 192
Query: 237 CASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMW 296
CA L D GR++H +++ D+D + A+ L+ MY K GE+ +F + A D+V W
Sbjct: 193 CAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVAVFQDIAHPDVVSW 252
Query: 297 NSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKS 356
N+II+G + + +L + EM SG P+ TL L AC+ G + GR++ S+
Sbjct: 253 NAIIAGCVLHDCNDLALMLLDEMKGSGTRPNMFTLSSALKACAAMGFKELGRQLHSSLIK 312
Query: 357 KYLVEPKTEHYAC--MVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA---CRTHM 410
++ ++ +A +VD+ + ++DA + ++MP + D I W +L+ C H+
Sbjct: 313 ---MDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSMP-KKDIIAWNALISGYSQCGDHL 367
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/236 (31%), Positives = 127/236 (53%), Gaps = 2/236 (0%)
Query: 180 ARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCAS 239
AR + D+ E D +WS ++ Y + G+ E + +F M GV+ N + SVL C+
Sbjct: 35 ARKLVDESSELDVVSWSSLLSGYVQNGFVEEALLVFNEMCLLGVKCNEFTFPSVLKACSM 94
Query: 240 LASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSI 299
L+ GR+VH V F+ D +VA+ L+ MY KCG L + +F +++V WN++
Sbjct: 95 KRDLNMGRKVHGMAVVTGFESDGFVANTLVVMYAKCGLLDDSRRLFGGIVERNVVSWNAL 154
Query: 300 ISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYL 359
S Y Q L +++ +F EM SG+MP++ ++ +L+AC+ + GR+I M L
Sbjct: 155 FSCYVQSELCGEAVGLFKEMVRSGIMPNEFSISIILNACAGLQEGDLGRKIHGLMLKMGL 214
Query: 360 VEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLA 415
+ A +VD+ +AG++E A+ + + + PD + W +++ C H DLA
Sbjct: 215 DLDQFSANA-LVDMYSKAGEIEGAVAVFQDIA-HPDVVSWNAIIAGCVLHDCNDLA 268
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 130/266 (48%), Gaps = 20/266 (7%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV----VSWTVMLGGFIRDSRIDDA 56
MP++++++W A++ GY + G +A +LF +M +++ + + +L I
Sbjct: 345 MPKKDIIAWNALISGYSQCGDHLDAVSLFSKMFSEDIDFNQTTLSTVLKSVASLQAIKVC 404
Query: 57 RRLFDMMPEKDVVAQ----TNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+++ + + + + +++ Y + +DE +IF+E ++++++T+MI+ Y
Sbjct: 405 KQIHTISIKSGIYSDFYVINSLLDTYGKCNHIDEASKIFEERTWEDLVAYTSMITAYSQY 464
Query: 113 NRIDVARKLF------EVMPE----KNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVV 162
+ A KL+ ++ P+ + ++ A L Y Q ++ K M +
Sbjct: 465 GDGEEALKLYLQMQDADIKPDPFICSSLLNACANLSAYEQGKQLH--VHAIKFGFMCDIF 522
Query: 163 ASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEG 222
ASNS++ + G ++ A F ++ + +WS MI Y + G+ E + LF M ++G
Sbjct: 523 ASNSLVNMYAKCGSIEDADRAFSEIPNRGIVSWSAMIGGYAQHGHGKEALRLFNQMLRDG 582
Query: 223 VRVNFPSLISVLSVCASLASLDHGRQ 248
V N +L+SVL C ++ G+Q
Sbjct: 583 VPPNHITLVSVLCACNHAGLVNEGKQ 608
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 83/165 (50%), Gaps = 3/165 (1%)
Query: 248 QVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYG 307
++HA L++ F D + + L+T+Y KC + + D + D+V W+S++SGY Q G
Sbjct: 2 ELHAHLIKFGFSRDPSLRNHLVTLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQNG 61
Query: 308 LGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHY 367
E++L VF+EM GV ++ T VL ACS + GR++ M E
Sbjct: 62 FVEEALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKV-HGMAVVTGFESDGFVA 120
Query: 368 ACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKL 412
+V + + G ++D+ +L + E + + W +L +C +L
Sbjct: 121 NTLVVMYAKCGLLDDSRRLFGGI-VERNVVSWNALF-SCYVQSEL 163
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 70/143 (48%), Gaps = 10/143 (6%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMP 64
++ + ++V Y + G I +A F ++P + +VSW+ M+GG+ + +A RLF+ M
Sbjct: 520 DIFASNSLVNMYAKCGSIEDADRAFSEIPNRGIVSWSAMIGGYAQHGHGKEALRLFNQML 579
Query: 65 EKDV----VAQTNMVLGYCQDGRVDEGREIFDEMP-----KKNVISWTTMISGYVNNNRI 115
V + +++ G V+EG++ F++M K + MI + ++
Sbjct: 580 RDGVPPNHITLVSVLCACNHAGLVNEGKQYFEKMEVMFGIKPTQEHYACMIDLLGRSGKL 639
Query: 116 DVARKLFEVMP-EKNEVSWTAML 137
+ A +L +P E + W A+L
Sbjct: 640 NEAVELVNSIPFEADGFVWGALL 662
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 72/145 (49%), Gaps = 18/145 (12%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM-----PEKNVVSWTVML----GGFIRDS 51
+P R +VSW+AM+ GY + G EA LF QM P ++ +V+ G + +
Sbjct: 547 IPNRGIVSWSAMIGGYAQHGHGKEALRLFNQMLRDGVPPNHITLVSVLCACNHAGLVNEG 606
Query: 52 R--IDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMP-KKNVISWTTMISG 108
+ + +F + P ++ A +LG + G+++E E+ + +P + + W ++
Sbjct: 607 KQYFEKMEVMFGIKPTQEHYACMIDLLG--RSGKLNEAVELVNSIPFEADGFVWGALLGA 664
Query: 109 YVNNNRIDVARK----LFEVMPEKN 129
+ I++ +K LF++ PEK+
Sbjct: 665 ARIHKNIELGQKAAKMLFDLEPEKS 689
>gi|449460574|ref|XP_004148020.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Cucumis sativus]
Length = 816
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 248/719 (34%), Positives = 379/719 (52%), Gaps = 121/719 (16%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMP----EKNVVSWTVMLGGF--------- 47
M ER VSWT ++ GY++ EA L+ M E + V+ +L GF
Sbjct: 100 MVERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSGFGELETKNVI 159
Query: 48 -----------------IRDSRIDD---------ARRLFDMMPEKDVVAQTNMVLGYCQD 81
+ +S +D A +LF M KD V +++ GY +
Sbjct: 160 VQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNE 219
Query: 82 GRVDEGREIFDEMPKK---------------------------------------NVISW 102
G +E E+F E+ NV
Sbjct: 220 GLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVG 279
Query: 103 TTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAM------ 156
++ Y ++++D KLF MPE + +S+ ++ Y G+ +++++LF+ +
Sbjct: 280 NALLDYYSKHDQVDEVGKLFYEMPELDGISYNVVITSYAWNGQFKESFDLFRKLQFTRFD 339
Query: 157 ----PMKSV--VASNSMILGLGQ----------------------------NGEVQKARV 182
P ++ +A++S+ L +G+ NG+ ++A+
Sbjct: 340 RRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESRVENALVDMYAKCNGD-KEAQK 398
Query: 183 VFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLAS 242
+FD + K W+ MI Y +KG E I++F+ M++ GV + + S+L CA+LAS
Sbjct: 399 IFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLAS 458
Query: 243 LDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISG 302
+ GRQ+H+ L+R F +VY S L+ Y KCG + F ++ V WN++IS
Sbjct: 459 ISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVSWNALISA 518
Query: 303 YAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEP 362
YAQ G + +L F +M SG PD V+ + VLSACS+ G V+E F SM Y V P
Sbjct: 519 YAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSACSHCGFVEEALWHFNSMTQIYEVTP 578
Query: 363 KTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKL 422
K EHY MVD+L R G+ ++A KL+ MPFEP I+W S+L +CR H +LA+ AA +L
Sbjct: 579 KREHYTSMVDVLCRNGRFDEAEKLMTEMPFEPSEIMWSSVLNSCRIHKNHELAKKAADRL 638
Query: 423 LQLEP-KNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTG 481
+E ++A PYI +SNIYA G++ +VA+++K MR R V K P SW+E++ + H+F+
Sbjct: 639 FNMEDLRDAAPYINMSNIYAVAGQWDNVAKVKKAMRDRGVRKVPAYSWVEIKHQTHVFSA 698
Query: 482 RDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYG 541
D SHPE I+R + + + + GY PD++ LHDVDE K+ SL+YHSE+ A+A+
Sbjct: 699 ND-KSHPEMKKILRKINALSKEMEKKGYKPDTTCALHDVDEVIKIESLKYHSERFAIAFA 757
Query: 542 LVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
L+ P+G PI VMKNLR C DCH+AIK+IS+++ REII+RD++RFHHFKDG+CSC DYW
Sbjct: 758 LMNTPDGSPIVVMKNLRACTDCHAAIKVISQIVEREIIVRDSSRFHHFKDGVCSCGDYW 816
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 117/473 (24%), Positives = 225/473 (47%), Gaps = 53/473 (11%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MP +N +S M+ G+++ G +++A LF M E+ VSWT+++GG+++ ++ +A RL+
Sbjct: 69 MPAKNTISLNMMISGHLKFGKLSKARELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLY 128
Query: 61 DMMP----EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPK----KNVISWTTMISGYVNN 112
M E D V ++ G+ + + +I + K N++ +++ Y
Sbjct: 129 ADMRRGGIEPDYVTLVTLLSGFGELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKT 188
Query: 113 NRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELF------------------- 153
+ + +A +LF+ M K+ V++ +++ GY+ G ++A ELF
Sbjct: 189 HCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALL 248
Query: 154 --------------------KAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDA 193
K + +V N+++ ++ +V + +F +M E D
Sbjct: 249 SAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFYEMPELDGI 308
Query: 194 TWSGMIKVYERKGYELEVIDLFTLMQKEGV-RVNFPSLISVLSVCASLASLDHGRQVHAQ 252
+++ +I Y G E DLF +Q R FP ++LS+ S +L GRQ+H Q
Sbjct: 309 SYNVVITSYAWNGQFKESFDLFRKLQFTRFDRRQFP-FATLLSIATSSLNLRMGRQIHCQ 367
Query: 253 LVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKS 312
+ + + V + L+ MY KC + + IFDN A K V W ++IS Y Q G E+
Sbjct: 368 AITVGANFESRVENALVDMYAKCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEG 427
Query: 313 LKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESM-KSKYLVEPKTEHYACMV 371
+ VF +M +GV D T +L AC+ + GR++ + +S ++ + + ++
Sbjct: 428 INVFSDMRRTGVPADQATFASILRACANLASISLGRQLHSLLIRSGFMSNVYSG--SALL 485
Query: 372 DLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQ 424
D + G + DA+K MP E +++ W +L+ A + +D + ++++Q
Sbjct: 486 DTYAKCGCMTDAIKSFGEMP-ERNSVSWNALISAYAQNGNVDGTLNSFQQMIQ 537
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 83/379 (21%), Positives = 181/379 (47%), Gaps = 12/379 (3%)
Query: 36 NVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMP 95
N + F+ + A ++FD MP K+ ++ M+ G+ + G++ + RE+FD M
Sbjct: 42 NTCRSNFQVNNFLERGDLVHAHQVFDQMPAKNTISLNMMISGHLKFGKLSKARELFDGMV 101
Query: 96 KKNVISWTTMISGYVNNNRIDVARKLFEVMP----EKNEVSWTAMLMGY----TQCGRIQ 147
++ +SWT +I GY+ +N+ A +L+ M E + V+ +L G+ T+ +Q
Sbjct: 102 ERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSGFGELETKNVIVQ 161
Query: 148 DAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGY 207
+ K +++ NS++ + + A +F M KD T++ ++ Y +G
Sbjct: 162 IHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGL 221
Query: 208 ELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASV 267
E I+LF + G++ + + ++LS L G+QVH +++ F +V+V +
Sbjct: 222 NEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGNA 281
Query: 268 LITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPD 327
L+ Y K ++ + +F D + +N +I+ YA G ++S +F ++ +
Sbjct: 282 LLDYYSKHDQVDEVGKLFYEMPELDGISYNVVITSYAWNGQFKESFDLFRKLQFTRFDRR 341
Query: 328 DVTLVGVLSACSYTGKVKEGREIF-ESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKL 386
+LS + + ++ GR+I +++ E + E+ +VD+ + ++A K+
Sbjct: 342 QFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESRVEN--ALVDMYAKCNGDKEAQKI 399
Query: 387 IEAMPFEPDAIIWGSLLGA 405
+ + + + W +++ A
Sbjct: 400 FDNIACK-STVPWTAMISA 417
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 104/218 (47%), Gaps = 19/218 (8%)
Query: 242 SLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIIS 301
SL+ + A +V+ F+ + ++ + +++ G+LV +FD +K+ + N +IS
Sbjct: 23 SLNSNHLIDAHIVKTGFNPNTCRSNFQVNNFLERGDLVHAHQVFDQMPAKNTISLNMMIS 82
Query: 302 GYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVE 361
G+ ++G K+ ++F M + + + G L + + KE ++ M+ + +E
Sbjct: 83 GHLKFGKLSKARELFDGMVERTAVSWTILIGGYLQ----SNQSKEAFRLYADMR-RGGIE 137
Query: 362 PKTEHYACMVDLLGRAGQVEDAMKLIE------AMPFEPDAIIWGSLLGA-CRTHMKLDL 414
P Y +V LL G++E +++ + +E + ++ SL+ A C+TH L L
Sbjct: 138 PD---YVTLVTLLSGFGELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHC-LYL 193
Query: 415 AEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAEL 452
A K +L K+ + L Y+++G + EL
Sbjct: 194 ASQLFKHMLN---KDTVTFNSLMTGYSNEGLNEEAIEL 228
>gi|224108029|ref|XP_002314694.1| predicted protein [Populus trichocarpa]
gi|222863734|gb|EEF00865.1| predicted protein [Populus trichocarpa]
Length = 631
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 234/616 (37%), Positives = 358/616 (58%), Gaps = 20/616 (3%)
Query: 2 PERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSR---IDDARR 58
P R VV+WTA++ G V+ G + A F +M +N+ + S + A +
Sbjct: 19 PTRCVVTWTALISGSVQNGYFSSALLYFSKMRRENIKPNDFTFPCAFKASTALCLPFAGK 78
Query: 59 LFDMMPEK-----DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNN 113
+ K D + Y + G E + +FDEMP +NV W IS V +
Sbjct: 79 QIHAIALKLGQINDKFVGCSAFDMYSKTGLKFEAQRLFDEMPPRNVAVWNAYISNAVLDG 138
Query: 114 R----IDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKS-----VVAS 164
R ID + V E + +++ A L R D + ++S V +
Sbjct: 139 RPGKAIDKFIEFRRVGGEPDLITFCAFLNACAD-ARCLDLGRQLHGLVIRSGFEGDVSVA 197
Query: 165 NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVR 224
N +I G+ EV+ A +VF+ M ++ +W M+ E+ + + +F + +KEG+
Sbjct: 198 NGIIDVYGKCKEVELAEMVFNGMGRRNSVSWCTMVAACEQNDEKEKACVVFLMGRKEGIE 257
Query: 225 VNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLI 284
+ + SV+S A ++ L+ GR VHA V+ + D++V S L+ MY KCG + + +
Sbjct: 258 LTDYMVSSVISAYAGISGLEFGRSVHALAVKACVEGDIFVGSALVDMYGKCGSIEDCEQV 317
Query: 285 FDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKV 344
F +++V WN++ISGYA G + ++ +F EM S V + VTL+ VLSACS G V
Sbjct: 318 FHEMPERNLVSWNAMISGYAHQGDVDMAMTLFEEMQSEAV-ANYVTLICVLSACSRGGAV 376
Query: 345 KEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLG 404
K G EIFESM+ +Y +EP EHYAC+ D+LGRAG VE A + ++ MP P +WG+LL
Sbjct: 377 KLGNEIFESMRDRYRIEPGAEHYACIADMLGRAGMVERAYEFVQKMPIRPTISVWGALLN 436
Query: 405 ACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKP 464
ACR + + +L ++AA L +L+PK++G ++LLSN++A+ GR+ + +RK M+ + K
Sbjct: 437 ACRVYGEPELGKIAADNLFKLDPKDSGNHVLLSNMFAAAGRWDEATLVRKEMKDVGIKKG 496
Query: 465 PGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEE 524
GCSW+ + KVH+F +D SH + I ML K+ ++ AGY PD+++ L+D++EEE
Sbjct: 497 AGCSWVTAKNKVHVFQAKD-TSHERNSEIQAMLVKLRTEMQAAGYMPDTNYALYDLEEEE 555
Query: 525 KVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDAN 584
K+ + YHSEK+A+A+GL+ LP GVPIR+ KNLR+CGDCHSA K IS ++GREII+RD N
Sbjct: 556 KMTEVGYHSEKIALAFGLIALPPGVPIRITKNLRICGDCHSAFKFISGIVGREIIVRDNN 615
Query: 585 RFHHFKDGLCSCRDYW 600
RFH F+D CSCRD+W
Sbjct: 616 RFHRFRDSQCSCRDFW 631
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 121/267 (45%), Gaps = 21/267 (7%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM----PEKNVVSWTVMLGGFIRDSRIDDA 56
MP RNV W A + V +G +A F + E +++++ L +D
Sbjct: 119 MPPRNVAVWNAYISNAVLDGRPGKAIDKFIEFRRVGGEPDLITFCAFLNACADARCLDLG 178
Query: 57 RRLFDMMP----EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
R+L ++ E DV ++ Y + V+ +F+ M ++N +SW TM++ N
Sbjct: 179 RQLHGLVIRSGFEGDVSVANGIIDVYGKCKEVELAEMVFNGMGRRNSVSWCTMVAACEQN 238
Query: 113 NRIDVARKLFEVMPEKNEVSWT-----AMLMGYT-----QCGRIQDAWELFKAMPMKSVV 162
+ + A +F +M K + T +++ Y + GR A + KA +
Sbjct: 239 DEKEKACVVF-LMGRKEGIELTDYMVSSVISAYAGISGLEFGRSVHALAV-KACVEGDIF 296
Query: 163 ASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEG 222
++++ G+ G ++ VF +M E++ +W+ MI Y +G + LF MQ E
Sbjct: 297 VGSALVDMYGKCGSIEDCEQVFHEMPERNLVSWNAMISGYAHQGDVDMAMTLFEEMQSEA 356
Query: 223 VRVNFPSLISVLSVCASLASLDHGRQV 249
V N+ +LI VLS C+ ++ G ++
Sbjct: 357 V-ANYVTLICVLSACSRGGAVKLGNEI 382
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 82/168 (48%), Gaps = 13/168 (7%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWT-----VMLGGFIRDSRIDD 55
M RN VSW MV E+ E + + M K + T ++ + S ++
Sbjct: 220 MGRRNSVSWCTMVAA-CEQNDEKEKACVVFLMGRKEGIELTDYMVSSVISAYAGISGLEF 278
Query: 56 ARRLFDMMP----EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVN 111
R + + E D+ + +V Y + G +++ ++F EMP++N++SW MISGY +
Sbjct: 279 GRSVHALAVKACVEGDIFVGSALVDMYGKCGSIEDCEQVFHEMPERNLVSWNAMISGYAH 338
Query: 112 NNRIDVARKLFEVMPEK---NEVSWTAMLMGYTQCGRIQDAWELFKAM 156
+D+A LFE M + N V+ +L ++ G ++ E+F++M
Sbjct: 339 QGDVDMAMTLFEEMQSEAVANYVTLICVLSACSRGGAVKLGNEIFESM 386
>gi|356552027|ref|XP_003544373.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Glycine max]
Length = 986
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 250/664 (37%), Positives = 372/664 (56%), Gaps = 70/664 (10%)
Query: 4 RNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVM-----------LGGFIRDSR 52
+++VSW ++V Y+ A LF +M ++++S V+ L +R +
Sbjct: 326 QDLVSWNSVVSAYMWASDANTALALFHKMTTRHLMSPDVISLVNILPACASLAASLRGRQ 385
Query: 53 IDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+ ++ DV +V Y + G+++E ++F M K+V+SW M++GY
Sbjct: 386 VHGFSIRSGLV--DDVFVGNAVVDMYAKCGKMEEANKVFQRMKFKDVVSWNAMVTGYSQA 443
Query: 113 NRIDVARKLFEVMPEKN----EVSWTAMLMGYTQCGRIQDAWELFKAMP----------- 157
R++ A LFE M E+N V+WTA++ GY Q G+ +A ++F+ M
Sbjct: 444 GRLEHALSLFERMTEENIELDVVTWTAVITGYAQRGQGCEALDVFRQMCDCGSRPNVVTL 503
Query: 158 ---MKSVVASNSMILG-----------LGQNG----------------------EVQKAR 181
+ + V+ +++ G L +G + AR
Sbjct: 504 VSLLSACVSVGALLHGKETHCYAIKFILNLDGPDPGADDLKVINGLIDMYAKCQSTEVAR 563
Query: 182 VVFDQM--REKDDATWSGMIKVYERKGYELEVIDLFTLMQK--EGVRVNFPSLISVLSVC 237
+FD + +++D TW+ MI Y + G + LF+ M K + ++ N +L L C
Sbjct: 564 KMFDSVSPKDRDVVTWTVMIGGYAQHGDANNALQLFSGMFKMDKSIKPNDFTLSCALVAC 623
Query: 238 ASLASLDHGRQVHAQLVRCQF-DVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMW 296
A LA+L GRQVHA ++R + V ++VA+ LI MY K G++ +++FDN ++ V W
Sbjct: 624 ARLAALRFGRQVHAYVLRNFYGSVMLFVANCLIDMYSKSGDVDTAQIVFDNMPQRNAVSW 683
Query: 297 NSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKS 356
S+++GY +G GE +L+VF EM ++PD +T + VL ACS++G V G F M
Sbjct: 684 TSLMTGYGMHGRGEDALRVFDEMRKVPLVPDGITFLVVLYACSHSGMVDHGINFFNRMSK 743
Query: 357 KYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAE 416
+ V+P EHYACMVDL GRAG++ +AMKLI MP EP ++W +LL ACR H ++L E
Sbjct: 744 DFGVDPGPEHYACMVDLWGRAGRLGEAMKLINEMPMEPTPVVWVALLSACRLHSNVELGE 803
Query: 417 VAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKV 476
AA +LL+LE N G Y LLSNIYA+ R+ DVA +R M++ + K PGCSWI+ K V
Sbjct: 804 FAANRLLELESGNDGSYTLLSNIYANARRWKDVARIRYTMKRTGIKKRPGCSWIQGRKGV 863
Query: 477 HMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKL 536
F D SHP+ I L + ++ GY P +SF LHDVD+EEK L HSEKL
Sbjct: 864 ATFYVGD-RSHPQSQQIYETLADLIQRIKAIGYVPQTSFALHDVDDEEKGDLLFEHSEKL 922
Query: 537 AVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSC 596
A+AYG++ L PIR+ KNLR+CGDCHSAI ISK++ EIILRD++RFHHFK+G CSC
Sbjct: 923 ALAYGILTLHPRAPIRITKNLRICGDCHSAITYISKIIEHEIILRDSSRFHHFKNGSCSC 982
Query: 597 RDYW 600
+ YW
Sbjct: 983 KGYW 986
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 102/391 (26%), Positives = 186/391 (47%), Gaps = 60/391 (15%)
Query: 78 YCQDGRVDEGREIFDEMPKKNV---ISWTTMISGYVNNNRIDVARKLFEVMPEKNEV--- 131
Y + G + +FD++ + + +SW +++S Y+ + + A LF M ++ +
Sbjct: 304 YGKCGALRHAHNMFDDLCHRGIQDLVSWNSVVSAYMWASDANTALALFHKMTTRHLMSPD 363
Query: 132 ------------SWTAMLMG-------------------------YTQCGRIQDAWELFK 154
S A L G Y +CG++++A ++F+
Sbjct: 364 VISLVNILPACASLAASLRGRQVHGFSIRSGLVDDVFVGNAVVDMYAKCGKMEEANKVFQ 423
Query: 155 AMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREK----DDATWSGMIKVYERKGYELE 210
M K VV+ N+M+ G Q G ++ A +F++M E+ D TW+ +I Y ++G E
Sbjct: 424 RMKFKDVVSWNAMVTGYSQAGRLEHALSLFERMTEENIELDVVTWTAVITGYAQRGQGCE 483
Query: 211 VIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDV--------DV 262
+D+F M G R N +L+S+LS C S+ +L HG++ H ++ ++ D+
Sbjct: 484 ALDVFRQMCDCGSRPNVVTLVSLLSACVSVGALLHGKETHCYAIKFILNLDGPDPGADDL 543
Query: 263 YVASVLITMYIKCGELVKGKLIFDNFASK--DIVMWNSIISGYAQYGLGEKSLKVFHEMF 320
V + LI MY KC + +FD+ + K D+V W +I GYAQ+G +L++F MF
Sbjct: 544 KVINGLIDMYAKCQSTEVARKMFDSVSPKDRDVVTWTVMIGGYAQHGDANNALQLFSGMF 603
Query: 321 --SSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAG 378
+ P+D TL L AC+ ++ GR++ + + C++D+ ++G
Sbjct: 604 KMDKSIKPNDFTLSCALVACARLAALRFGRQVHAYVLRNFYGSVMLFVANCLIDMYSKSG 663
Query: 379 QVEDAMKLIEAMPFEPDAIIWGSLLGACRTH 409
V+ A + + MP + +A+ W SL+ H
Sbjct: 664 DVDTAQIVFDNMP-QRNAVSWTSLMTGYGMH 693
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 135/299 (45%), Gaps = 49/299 (16%)
Query: 159 KSVVASNSMILGLGQNGEVQKARVVFDQMREK---DDATWSGMIKVYERKGYELEVIDLF 215
+V N+++ G+ G ++ A +FD + + D +W+ ++ Y + LF
Sbjct: 292 SNVFVCNAVVSMYGKCGALRHAHNMFDDLCHRGIQDLVSWNSVVSAYMWASDANTALALF 351
Query: 216 TLMQ-KEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIK 274
M + + + SL+++L CASLA+ GRQVH +R DV+V + ++ MY K
Sbjct: 352 HKMTTRHLMSPDVISLVNILPACASLAASLRGRQVHGFSIRSGLVDDVFVGNAVVDMYAK 411
Query: 275 CGELVKGKLIFDNFASKDIVMWNS-----------------------------------I 299
CG++ + +F KD+V WN+ +
Sbjct: 412 CGKMEEANKVFQRMKFKDVVSWNAMVTGYSQAGRLEHALSLFERMTEENIELDVVTWTAV 471
Query: 300 ISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYL 359
I+GYAQ G G ++L VF +M G P+ VTLV +LSAC G + G+E K++
Sbjct: 472 ITGYAQRGQGCEALDVFRQMCDCGSRPNVVTLVSLLSACVSVGALLHGKET-HCYAIKFI 530
Query: 360 V-----EPKTEHYAC---MVDLLGRAGQVEDAMKLIEAM-PFEPDAIIWGSLLGACRTH 409
+ +P + ++D+ + E A K+ +++ P + D + W ++G H
Sbjct: 531 LNLDGPDPGADDLKVINGLIDMYAKCQSTEVARKMFDSVSPKDRDVVTWTVMIGGYAQH 589
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 122/240 (50%), Gaps = 10/240 (4%)
Query: 195 WSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLV 254
W+ +I+ G +V L+ M+ G + + V CA+L+SL G +HA +
Sbjct: 227 WNQLIRRALHLGSPRDVFTLYRQMKSLGWTPDHYTFPFVFKACANLSSLSLGASLHATVS 286
Query: 255 RCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASK---DIVMWNSIISGYAQYGLGEK 311
R F +V+V + +++MY KCG L +FD+ + D+V WNS++S Y
Sbjct: 287 RSGFASNVFVCNAVVSMYGKCGALRHAHNMFDDLCHRGIQDLVSWNSVVSAYMWASDANT 346
Query: 312 SLKVFHEMFSSGVM-PDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACM 370
+L +FH+M + +M PD ++LV +L AC+ GR++ LV+ A +
Sbjct: 347 ALALFHKMTTRHLMSPDVISLVNILPACASLAASLRGRQVHGFSIRSGLVDDVFVGNA-V 405
Query: 371 VDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLG----ACRTHMKLDLAEVAAKKLLQLE 426
VD+ + G++E+A K+ + M F+ D + W +++ A R L L E ++ ++L+
Sbjct: 406 VDMYAKCGKMEEANKVFQRMKFK-DVVSWNAMVTGYSQAGRLEHALSLFERMTEENIELD 464
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 87/380 (22%), Positives = 161/380 (42%), Gaps = 71/380 (18%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKN----VVSWTVMLGGFIRDSR---- 52
M ++VVSW AMV GY + G + A +LF +M E+N VV+WT ++ G+ + +
Sbjct: 425 MKFKDVVSWNAMVTGYSQAGRLEHALSLFERMTEENIELDVVTWTAVITGYAQRGQGCEA 484
Query: 53 IDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPK------------KNVI 100
+D R++ D +VV +++ G + G+E K ++
Sbjct: 485 LDVFRQMCDCGSRPNVVTLVSLLSACVSVGALLHGKETHCYAIKFILNLDGPDPGADDLK 544
Query: 101 SWTTMISGYVNNNRIDVARKLFEVMPEKNE--VSWTAMLMGYTQCGRIQDAWELFKAM-P 157
+I Y +VARK+F+ + K+ V+WT M+ GY Q G +A +LF M
Sbjct: 545 VINGLIDMYAKCQSTEVARKMFDSVSPKDRDVVTWTVMIGGYAQHGDANNALQLFSGMFK 604
Query: 158 MKSVVASNSMILGLG-----------------------------------------QNGE 176
M + N L ++G+
Sbjct: 605 MDKSIKPNDFTLSCALVACARLAALRFGRQVHAYVLRNFYGSVMLFVANCLIDMYSKSGD 664
Query: 177 VQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSV 236
V A++VFD M +++ +W+ ++ Y G + + +F M+K + + + + VL
Sbjct: 665 VDTAQIVFDNMPQRNAVSWTSLMTGYGMHGRGEDALRVFDEMRKVPLVPDGITFLVVLYA 724
Query: 237 CASLASLDHGRQVHAQLVRCQFDVDVYVA--SVLITMYIKCGELVKG-KLIFDNFASKDI 293
C+ +DHG ++ + F VD + ++ ++ + G L + KLI +
Sbjct: 725 CSHSGMVDHGINFFNRMSK-DFGVDPGPEHYACMVDLWGRAGRLGEAMKLINEMPMEPTP 783
Query: 294 VMWNSIISG---YAQYGLGE 310
V+W +++S ++ LGE
Sbjct: 784 VVWVALLSACRLHSNVELGE 803
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 76/163 (46%), Gaps = 17/163 (10%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVV----SWTVMLGGFIRDSRIDDA 56
MP+RN VSWT+++ GY G +A +F +M + +V ++ V+L +D
Sbjct: 675 MPQRNAVSWTSLMTGYGMHGRGEDALRVFDEMRKVPLVPDGITFLVVLYACSHSGMVDHG 734
Query: 57 RRLFDMMPEKDVVAQTN------MVLGYCQDGRVDEGREIFDEMP-KKNVISWTTMISGY 109
F+ M KD MV + + GR+ E ++ +EMP + + W ++S
Sbjct: 735 INFFNRM-SKDFGVDPGPEHYACMVDLWGRAGRLGEAMKLINEMPMEPTPVVWVALLSAC 793
Query: 110 VNNNRIDV----ARKLFEVMPEKNEVSWTAMLMGYTQCGRIQD 148
++ +++ A +L E + N+ S+T + Y R +D
Sbjct: 794 RLHSNVELGEFAANRLLE-LESGNDGSYTLLSNIYANARRWKD 835
>gi|188509964|gb|ACD56648.1| putative pentatricopeptide repeat protein [Gossypioides kirkii]
Length = 805
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 231/657 (35%), Positives = 368/657 (56%), Gaps = 68/657 (10%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
M ++NV W MV Y + G E+ LF M EK I R + A LF
Sbjct: 160 MEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKG-----------IEGKRPESASELF 208
Query: 61 DMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMP------------------------- 95
D + ++DV++ +M+ GY +G + G EI+ +M
Sbjct: 209 DKLCDRDVISWNSMISGYVSNGLTERGLEIYKQMMYLGIDVDLATIISVLVGCANSGTLS 268
Query: 96 --------------KKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYT 141
++ + T++ Y +D A ++FE M E+N VSWT+M+ GYT
Sbjct: 269 LGKAVHSLAIKSTFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYT 328
Query: 142 QCGRIQDAWELFKAMPMKSV----VASNSMILGLGQNGEVQKARVVFDQMR----EKDDA 193
+ GR A L + M + V VA+ S++ ++G + + V D ++ E +
Sbjct: 329 RDGRSDGAIRLLQQMEKEGVKLDVVATTSILHACARSGSLDNGKDVHDYIKANNMESNLF 388
Query: 194 TWSGMIKVYERKGYELEVIDLFTLMQKEGV----------RVNFPSLISVLSVCASLASL 243
+ ++ +Y + G +F+ M + + + + ++ +L CASL++L
Sbjct: 389 VCNALMDMYTKCGSMDGANSVFSTMVVKDIISWNTMIGELKPDSRTMACILPACASLSAL 448
Query: 244 DHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGY 303
+ G+++H ++R + D +VA+ L+ +Y+KCG L +L+FD SKD+V W +ISGY
Sbjct: 449 ERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMISGY 508
Query: 304 AQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPK 363
+G G +++ F+EM +G+ PD+V+ + +L ACS++G +++G F MK+ + +EPK
Sbjct: 509 GMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPK 568
Query: 364 TEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLL 423
EHYACMVDLL R G + A + IE +P PDA IWG+LL CR + ++LAE A+++
Sbjct: 569 LEHYACMVDLLSRTGNLSKAYEFIETLPIAPDATIWGALLCGCRIYHDIELAEKVAERVF 628
Query: 424 QLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRD 483
+LEP+N G Y+LL+NIYA ++ +V +R+ + K+ + K PGCSWIE++ KV++F +
Sbjct: 629 ELEPENTGYYVLLANIYAEAEKWEEVKRMREKIGKKGLRKNPGCSWIEIKGKVNLFVSGN 688
Query: 484 CVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLV 543
SHP I +L+K+ ++E GY P + + L + DE +K +L HSEKLA+A+GL+
Sbjct: 689 NSSHPHSKKIESLLKKMRRKMKEEGYFPKTKYALINADEMQKEMALCGHSEKLAMAFGLL 748
Query: 544 KLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
LP +RV KNLRVCGDCH K +SK REI+LRD+NRFHHFK+G CSCR +W
Sbjct: 749 ALPPRKTVRVTKNLRVCGDCHEMAKFMSKETRREIVLRDSNRFHHFKNGYCSCRGFW 805
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 114/474 (24%), Positives = 202/474 (42%), Gaps = 92/474 (19%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTL--FWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
+R V + A + + + G + A L Q E +++ +L + D +++
Sbjct: 63 DRQVTDYNAKILHFCQLGNLENAMELVCMCQKSELETKTYSSVLQLCAGSKSLTDGKKVH 122
Query: 61 DMMPEKDV----VAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGY------- 109
++ +V V +V Y G + EGR +FD M KKNV W M+S Y
Sbjct: 123 SIIKSNNVAVDEVLGLKLVSLYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFK 182
Query: 110 -------------VNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAM 156
+ R + A +LF+ + +++ +SW +M+ GY G + E++K M
Sbjct: 183 ESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWNSMISGYVSNGLTERGLEIYKQM 242
Query: 157 -------PMKSVVA-----SNSMILGLGQN---------------------------GEV 177
+ ++++ +NS L LG+ G++
Sbjct: 243 MYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSTFERRINFSNTLLDMYSKCGDL 302
Query: 178 QKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVC 237
A VF++M E++ +W+ MI Y R G I L M+KEGV+++ + S+L C
Sbjct: 303 DGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIRLLQQMEKEGVKLDVVATTSILHAC 362
Query: 238 ASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWN 297
A SLD+G+ VH + + +++V + L+ MY KCG + +F KDI+ WN
Sbjct: 363 ARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYTKCGSMDGANSVFSTMVVKDIISWN 422
Query: 298 SIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFES-MKS 356
++I GE + PD T+ +L AC+ ++ G+EI +++
Sbjct: 423 TMI--------GE-------------LKPDSRTMACILPACASLSALERGKEIHGYILRN 461
Query: 357 KYLVEPKTEHYA-CMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTH 409
Y H A +VDL + G + A L + +P D + W ++ H
Sbjct: 462 GY---SSDRHVANALVDLYVKCGVLGLARLLFDMIP-SKDLVSWTVMISGYGMH 511
>gi|414585731|tpg|DAA36302.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
Length = 865
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 234/648 (36%), Positives = 365/648 (56%), Gaps = 60/648 (9%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV----VSWTVMLGGFIRDSRIDDA 56
MPER+VVSW MV + G + EA + M K V ++T L R S +
Sbjct: 230 MPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWG 289
Query: 57 RRLFDM----MPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
++L +P D + +V Y + G E + +F+ + +N ++WT +ISG++
Sbjct: 290 KQLHAQVIRNLPHIDPYVASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQY 349
Query: 113 NRIDVARKLFEVMPEK----NEVSWTAMLMG----------------------------- 139
+ +LF M + ++ + ++ G
Sbjct: 350 GCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVS 409
Query: 140 ------YTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDA 193
Y +C +Q A +F+ M K +V+ SMI Q G V KAR FD M EK+
Sbjct: 410 NSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSEKNVI 469
Query: 194 TWSGMIKVYERKGYELEVIDLFTLM-QKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQ 252
TW+ M+ Y + G E + + ++ +M +E VR ++ + +++ CA L + G Q+ +
Sbjct: 470 TWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQIIGR 529
Query: 253 LVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKS 312
V+ +D VA+ +ITMY KCG +++ + +FD KDIV WN++I+GY+Q+G+G+++
Sbjct: 530 TVKVGLIIDTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQA 589
Query: 313 LKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVD 372
+++F ++ G PD ++ V VLS CS++G V+EG+ F+ MK + + P EH++CMVD
Sbjct: 590 IEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGKFYFDMMKRAHNISPGLEHFSCMVD 649
Query: 373 LLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGP 432
LLGRAG + +A LI+ MP +P A +WG+LL AC+ H +LAE+AAK + +L+ ++G
Sbjct: 650 LLGRAGHLTEAKDLIDDMPMKPTAEVWGALLSACKIHGNNELAELAAKHVFELDSPDSGS 709
Query: 433 YILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPM 492
Y+L++ IYA G+ D A++RK MR + + K PG SW+EV+ KVH+F D VSHP+
Sbjct: 710 YMLMAKIYADAGKSDDSAQIRKLMRDKGIKKNPGYSWMEVDNKVHVFKADD-VSHPQVLA 768
Query: 493 IMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIR 552
I + L+++ + GY S ++H HSEKLAVA+GL+ LP +PI
Sbjct: 769 IRKKLDELMEKIARLGYVRTDS-------TRSEIH----HSEKLAVAFGLMTLPTWMPIH 817
Query: 553 VMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
+MKNLR+CGDCH+ IKLIS V GRE ++RDA RFHHF G CSC DYW
Sbjct: 818 IMKNLRICGDCHTVIKLISTVTGREFVIRDAVRFHHFNGGSCSCGDYW 865
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 113/441 (25%), Positives = 197/441 (44%), Gaps = 74/441 (16%)
Query: 41 TVMLGGFIRDSRIDDARRLFDM-MPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNV 99
+L ++ + DARRL M + +V+ M+ GY + GR+ + E+F MP ++V
Sbjct: 43 NTLLHAYLSCGALSDARRLLLMDIAHPNVITHNVMLNGYAKLGRLSDAVELFGRMPARDV 102
Query: 100 ISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSW-------------------------- 133
SW T++SGY + + V+ + F M + SW
Sbjct: 103 ASWNTLMSGYFQSRQYLVSLETFLSMHRSGD-SWPNAFTLACAMKSCGALGWHSLALQLL 161
Query: 134 ---------------TAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQ 178
A++ + +CG + A LF + ++ NSM+ G + V
Sbjct: 162 AMVQKFDSQDDSEVAAALVDMFVRCGAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVD 221
Query: 179 KARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCA 238
A +FD M E+D +W+ M+ + G E +D+ MQ +GVR++ + S L+ CA
Sbjct: 222 HALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACA 281
Query: 239 SLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNS 298
L+SL G+Q+HAQ++R +D YVAS L+ +Y K G + K +F++ ++ V W
Sbjct: 282 RLSSLRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTV 341
Query: 299 IISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFE------ 352
+ISG+ QYG +S+++F++M + + D L ++S C + GR++
Sbjct: 342 LISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSG 401
Query: 353 ------------SMKSK------------YLVEPKTEHYACMVDLLGRAGQVEDAMKLIE 388
SM +K ++ E + M+ + G V A + +
Sbjct: 402 QIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFD 461
Query: 389 AMPFEPDAIIWGSLLGACRTH 409
M E + I W ++LGA H
Sbjct: 462 GMS-EKNVITWNAMLGAYIQH 481
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 109/519 (21%), Positives = 223/519 (42%), Gaps = 119/519 (22%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRD-------------S 51
NV++ M+ GY + G +++A LF +MP ++V SW ++ G+ +
Sbjct: 70 NVITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLSMH 129
Query: 52 RIDDA-----------------------------RRLFDMMPEKDVVAQTNMVLGYCQDG 82
R D+ + FD + +V A +V + + G
Sbjct: 130 RSGDSWPNAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAA--LVDMFVRCG 187
Query: 83 RVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQ 142
VD +F + + + +M++GYV +D A +LF+ MPE++ VSW M+ +Q
Sbjct: 188 AVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQ 247
Query: 143 CGRIQDAWELFKAMPMKSV---------------------------------------VA 163
GR+++A ++ M K V
Sbjct: 248 SGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYV 307
Query: 164 SNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGV 223
+++++ ++G ++A+ VF+ + ++++ W+ +I + + G E ++LF M+ E +
Sbjct: 308 ASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELM 367
Query: 224 RVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKC-------- 275
++ +L +++S C S L GRQ+H+ ++ V V++ LI+MY KC
Sbjct: 368 TLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEA 427
Query: 276 -----------------------GELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKS 312
G + K + FD + K+++ WN+++ Y Q+G E
Sbjct: 428 IFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQHGAEEDG 487
Query: 313 LKVFHEMFSSG-VMPDDVTLVGVLSACSYTGKVKEGREIF-ESMKSKYLVEPKTEHYACM 370
L+++ M S V PD VT V + C+ G K G +I ++K +++ + +
Sbjct: 488 LRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVAN--AV 545
Query: 371 VDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTH 409
+ + + G++ +A K+ + + + D + W +++ H
Sbjct: 546 ITMYSKCGRILEARKVFDFLNVK-DIVSWNAMITGYSQH 583
>gi|413934850|gb|AFW69401.1| hypothetical protein ZEAMMB73_719952 [Zea mays]
Length = 742
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 229/587 (39%), Positives = 340/587 (57%), Gaps = 41/587 (6%)
Query: 54 DDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNN 113
DDARR FD +P KD V ++ G + G +DE R + + P++NV+SWT++I+GY
Sbjct: 157 DDARRAFDEIPAKDAVVWATVIGGLVRWGLLDEARRLLVQAPERNVVSWTSLIAGYSRAG 216
Query: 114 RIDVARKLFEVM------PEKNEVSWT--------------------------------- 134
R A F M P++ V
Sbjct: 217 RPADAVYCFNCMLSDGVAPDEVAVIGALSACSKLKNLDLGRLLHLLVGQKRIRMTDNLVV 276
Query: 135 AMLMGYTQCGRIQDAWELFKAMPM-KSVVASNSMILGLGQNGEVQKARVVFDQMREKDDA 193
A++ Y +CG I A +F A+ + N++I G + G V AR +FDQM +D
Sbjct: 277 ALIDMYAKCGDIAQAQAVFDAVGRGQKPEPWNAIIDGYCKLGHVDVARSLFDQMGARDVI 336
Query: 194 TWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQL 253
T++ MI Y G + + LF M++ G+R + +++S+L+ CASL +L HGR +HA +
Sbjct: 337 TFNSMITGYIHSGRLRDALQLFMQMRRHGMRADNFTVVSLLTACASLGALPHGRALHASI 396
Query: 254 VRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSL 313
+ + DVY+ + L+ MY+KCG + + +F +D+ W ++I+G A G+G+ +L
Sbjct: 397 EQRIVEEDVYLGTALLDMYMKCGRVDEATAVFHRMGERDVHTWTAMIAGLAFNGMGKDAL 456
Query: 314 KVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDL 373
+ F +M G P VT + VL+ACS++ + EGR F M+S + + P+ EHY CM+DL
Sbjct: 457 ESFCQMKRDGFQPTSVTYIAVLTACSHSSLLDEGRLHFNEMRSLHKLHPQVEHYGCMIDL 516
Query: 374 LGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPY 433
L R+G +++AM L++ MP +P+A+IWGS+L ACR H +DLA AA+ LL+L P+ Y
Sbjct: 517 LARSGLLDEAMHLVQTMPMQPNAVIWGSILSACRVHKNIDLARHAAEHLLKLAPEEDAVY 576
Query: 434 ILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMI 493
+ L NIY ++ D +R M +R V K G S I V +VH F D SHP I
Sbjct: 577 VQLYNIYIDSRQWADAKRVRMLMEERGVKKTAGYSSITVAGQVHKFVAND-QSHPWTLEI 635
Query: 494 MRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRV 553
M M+E+I L+ GY P +S + DVDEEEK +L HSEK+A+A+GL+ LP +PI +
Sbjct: 636 MAMMEEIACRLKSVGYSPVTSRIAVDVDEEEKEQALLAHSEKIAIAFGLISLPPSLPIHI 695
Query: 554 MKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
+KNLRVC DCHSAIKL+S++ REII+RD +RFHHF+DG CSC D+W
Sbjct: 696 VKNLRVCEDCHSAIKLVSQLWNREIIVRDRSRFHHFRDGACSCNDFW 742
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/384 (23%), Positives = 157/384 (40%), Gaps = 83/384 (21%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
+P ++ V W ++ G V G++ EA L Q PE+NVVSWT ++ G+ R R DA F
Sbjct: 166 IPAKDAVVWATVIGGLVRWGLLDEARRLLVQAPERNVVSWTSLIAGYSRAGRPADAVYCF 225
Query: 61 DMMPEKDVVAQTNMVLG---------------------------------------YCQD 81
+ M V V+G Y +
Sbjct: 226 NCMLSDGVAPDEVAVIGALSACSKLKNLDLGRLLHLLVGQKRIRMTDNLVVALIDMYAKC 285
Query: 82 GRVDEGREIFDEMPK-KNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGY 140
G + + + +FD + + + W +I GY +DVAR LF+ M ++ +++ +M+ GY
Sbjct: 286 GDIAQAQAVFDAVGRGQKPEPWNAIIDGYCKLGHVDVARSLFDQMGARDVITFNSMITGY 345
Query: 141 TQCGRIQDAWELFKAMPMKSVVASNSMILGL----------------------------- 171
GR++DA +LF M + A N ++ L
Sbjct: 346 IHSGRLRDALQLFMQMRRHGMRADNFTVVSLLTACASLGALPHGRALHASIEQRIVEEDV 405
Query: 172 ----------GQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKE 221
+ G V +A VF +M E+D TW+ MI G + ++ F M+++
Sbjct: 406 YLGTALLDMYMKCGRVDEATAVFHRMGERDVHTWTAMIAGLAFNGMGKDALESFCQMKRD 465
Query: 222 GVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVA--SVLITMYIKCGELV 279
G + + I+VL+ C+ + LD GR +H +R + V +I + + G L
Sbjct: 466 GFQPTSVTYIAVLTACSHSSLLDEGR-LHFNEMRSLHKLHPQVEHYGCMIDLLARSGLLD 524
Query: 280 KGKLIFDNFASK-DIVMWNSIISG 302
+ + + + V+W SI+S
Sbjct: 525 EAMHLVQTMPMQPNAVIWGSILSA 548
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 92/230 (40%), Gaps = 37/230 (16%)
Query: 264 VASVLITMYIKCGELVKGKLIFDNFASKDIVM---------------------------- 295
VA+ LI MY G + FD +KD V+
Sbjct: 142 VANPLIHMYASMGLTDDARRAFDEIPAKDAVVWATVIGGLVRWGLLDEARRLLVQAPERN 201
Query: 296 ---WNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFE 352
W S+I+GY++ G ++ F+ M S GV PD+V ++G LSACS + GR +
Sbjct: 202 VVSWTSLIAGYSRAGRPADAVYCFNCMLSDGVAPDEVAVIGALSACSKLKNLDLGRLLHL 261
Query: 353 SMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL-GACRTHMK 411
+ K + ++D+ + G + A + +A+ W +++ G C K
Sbjct: 262 LVGQKR-IRMTDNLVVALIDMYAKCGDIAQAQAVFDAVGRGQKPEPWNAIIDGYC----K 316
Query: 412 LDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNV 461
L +VA Q+ ++ + + Y GR D +L MR+ +
Sbjct: 317 LGHVDVARSLFDQMGARDVITFNSMITGYIHSGRLRDALQLFMQMRRHGM 366
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 66/145 (45%), Gaps = 14/145 (9%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMP----EKNVVSWTVMLGGFIRDSRIDDA 56
M ER+V +WTAM+ G GM +A F QM + V++ +L S +D+
Sbjct: 431 MGERDVHTWTAMIAGLAFNGMGKDALESFCQMKRDGFQPTSVTYIAVLTACSHSSLLDEG 490
Query: 57 RRLFDMMP-----EKDVVAQTNMVLGYCQDGRVDEGREIFDEMP-KKNVISWTTMISGYV 110
R F+ M V M+ + G +DE + MP + N + W +++S
Sbjct: 491 RLHFNEMRSLHKLHPQVEHYGCMIDLLARSGLLDEAMHLVQTMPMQPNAVIWGSILSACR 550
Query: 111 NNNRIDVAR----KLFEVMPEKNEV 131
+ ID+AR L ++ PE++ V
Sbjct: 551 VHKNIDLARHAAEHLLKLAPEEDAV 575
>gi|115478174|ref|NP_001062682.1| Os09g0251500 [Oryza sativa Japonica Group]
gi|47848472|dbj|BAD22327.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|47848643|dbj|BAD22491.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113630915|dbj|BAF24596.1| Os09g0251500 [Oryza sativa Japonica Group]
gi|215767397|dbj|BAG99625.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 877
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 233/645 (36%), Positives = 362/645 (56%), Gaps = 48/645 (7%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDM 62
E++V + A+V YV+ G + A +F +MP+ +VVSW ++ G + + A L
Sbjct: 234 EKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQ 293
Query: 63 MPEKDVVAQTNM---VLGYCQD-GRVDEGREIFDEMPKKNVIS----WTTMISGYVNNNR 114
M +V M +L C G D GR+I M K N S ++ Y N+
Sbjct: 294 MKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHF 353
Query: 115 IDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAM----------PMKSVVAS 164
+D A K+F+ M ++ + W A++ G + GR +A+ +F + + +V+ S
Sbjct: 354 LDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKS 413
Query: 165 NSMILGLGQNGEVQK-----------------------------ARVVFDQMREKDDATW 195
+ + +V A VF++ D
Sbjct: 414 TASLEAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAV 473
Query: 196 SGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVR 255
+ MI + + I LF M ++G+ + L S+L+ CASL++ + G+QVHA L++
Sbjct: 474 TSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIK 533
Query: 256 CQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKV 315
QF D + + L+ Y KCG + +L F + + +V W+++I G AQ+G G+++L++
Sbjct: 534 RQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALEL 593
Query: 316 FHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLG 375
F M G+ P+ +T+ VL AC++ G V E + F SMK + ++ EHY+CM+DLLG
Sbjct: 594 FGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLG 653
Query: 376 RAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYIL 435
RAG+++DAM+L+ +MPF+ +A +WG+LLGA R H +L ++AA+KL LEP+ +G ++L
Sbjct: 654 RAGKLDDAMELVNSMPFQANASVWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVL 713
Query: 436 LSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMR 495
L+N YAS G +++VA++RK M+ N+ K P SW+EV+ KVH F D SHP I
Sbjct: 714 LANTYASSGMWNEVAKVRKLMKDSNIKKEPAMSWVEVKDKVHTFIVGD-KSHPMTKEIYS 772
Query: 496 MLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMK 555
L+++G L+ +AGY P+ LHD+D EK L +HSE+LAVA+ L+ P G PIRV K
Sbjct: 773 KLDELGDLMSKAGYIPNVDVDLHDLDRSEKELLLSHHSERLAVAFALLSTPPGAPIRVKK 832
Query: 556 NLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
NLR+C DCH A K IS ++ REII+RD NRFHHF+DG CSC DYW
Sbjct: 833 NLRICRDCHMAFKFISNIVSREIIIRDINRFHHFRDGTCSCGDYW 877
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 91/328 (27%), Positives = 161/328 (49%), Gaps = 12/328 (3%)
Query: 87 GREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRI 146
R +FDE+P +SW+++++ Y NN A + F M + L +C
Sbjct: 56 ARRVFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPD 115
Query: 147 QDAWELFKAMPMKS-----VVASNSMILGLGQNGEVQKARVVFDQM-REKDDATWSGMIK 200
AM M + V +N+++ G G + AR VFD+ E++ +W+G++
Sbjct: 116 AQLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMS 175
Query: 201 VYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDV 260
Y + + I +F M G++ V++ C ++D GRQVHA +VR ++
Sbjct: 176 AYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEK 235
Query: 261 DVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMF 320
DV+ A+ L+ MY+K G + +IF+ D+V WN++ISG G +++++ +M
Sbjct: 236 DVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMK 295
Query: 321 SSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHY--ACMVDLLGRAG 378
SSG++P+ L +L AC+ G GR+I M ++ Y +VD+ +
Sbjct: 296 SSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIK---ANADSDDYIGVGLVDMYAKNH 352
Query: 379 QVEDAMKLIEAMPFEPDAIIWGSLLGAC 406
++DAMK+ + M D I+W +L+ C
Sbjct: 353 FLDDAMKVFDWMSHR-DLILWNALISGC 379
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 115/456 (25%), Positives = 199/456 (43%), Gaps = 49/456 (10%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIR---DSRIDDAR 57
+P+ VSW+++V Y G+ A F M + V L ++ D+++
Sbjct: 63 IPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPDAQLGAQV 122
Query: 58 RLFDMMPE--KDVVAQTNMVLGYCQDGRVDEGREIFDEM-PKKNVISWTTMISGYVNNNR 114
M DV +V Y G +D+ R +FDE ++N +SW ++S YV N++
Sbjct: 123 HAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVKNDQ 182
Query: 115 IDVARKLFEVMP----EKNEVSWTAMLMGYTQCGRIQDAWELFKAMPM-----KSVVASN 165
A ++F M + E ++ ++ T I DA AM + K V +N
Sbjct: 183 CGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNI-DAGRQVHAMVVRMGYEKDVFTAN 241
Query: 166 SMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRV 225
+++ + G V A V+F++M + D +W+ +I G++ I+L M+ G+
Sbjct: 242 ALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVP 301
Query: 226 NFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIF 285
N L S+L CA + D GRQ+H +++ D D Y+ L+ MY K L +F
Sbjct: 302 NVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVF 361
Query: 286 DNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLS------ACS 339
D + +D+++WN++ISG + G +++ +F+ + G+ + TL VL A S
Sbjct: 362 DWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAAS 421
Query: 340 YTGKVKEGREIFESMKSKYLVEPKTEHY---AC---------------------MVDLLG 375
T +V E + ++V + Y +C M+ L
Sbjct: 422 ATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALS 481
Query: 376 RAGQVEDAMKLIEAM---PFEPDAIIWGSLLGACRT 408
+ E A+KL M EPD + SLL AC +
Sbjct: 482 QCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACAS 517
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 76/174 (43%), Gaps = 10/174 (5%)
Query: 234 LSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDI 293
L+ A+ +L G +HA L++ F + + LI+ Y KC + +FD
Sbjct: 11 LTRYAAAQALLPGAHLHANLLKSGFLASLR--NHLISFYSKCRRPCCARRVFDEIPDPCH 68
Query: 294 VMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSAC--SYTGKVKEGREIF 351
V W+S+++ Y+ GL +++ FH M + GV ++ L VL + G +
Sbjct: 69 VSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPDAQLGAQVHAMAMA 128
Query: 352 ESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
S V +V + G G ++DA ++ + E +A+ W L+ A
Sbjct: 129 TGFGSDVFVANA------LVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSA 176
>gi|222612904|gb|EEE51036.1| hypothetical protein OsJ_31684 [Oryza sativa Japonica Group]
Length = 637
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 217/567 (38%), Positives = 336/567 (59%), Gaps = 20/567 (3%)
Query: 49 RDSRIDDARRLFDMMPEK----DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTT 104
R +DDAR + + V +++ YC+ G V + R +FD MP +++ SWT+
Sbjct: 76 RYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMPARDMCSWTS 135
Query: 105 MISGYVNNNRIDVARKLFEVMP----EKNEVSWTAML--MGYTQCGRIQDAWELFKAMPM 158
+I+GY N+ D A L M + N ++ ++L G + I E A+ +
Sbjct: 136 LIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIG---EQIHALTV 192
Query: 159 K-----SVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVID 213
K V ++++ + G + A VFDQ+ K+ +W+ +I + RKG +
Sbjct: 193 KYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGETTLL 252
Query: 214 LFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYI 273
+F MQ+ G + SV S A + +L+ G+ VHA +++ + +V + ++ MY
Sbjct: 253 MFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTILDMYA 312
Query: 274 KCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVG 333
K G ++ + +FD KD+V WNS+++ +AQYGLG +++ F EM GV + +T +
Sbjct: 313 KSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQITFLS 372
Query: 334 VLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFE 393
+L+ACS+ G VKEG++ F+ MK +Y +EP+ +HY +VDLLGRAG + DA+ I MP +
Sbjct: 373 ILTACSHGGLVKEGKQYFDMMK-EYNLEPEIDHYVTVVDLLGRAGLLNDALVFIFKMPMK 431
Query: 394 PDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELR 453
P A +WG+LLG+CR H + + AA + +L+P + GP +LL NIYAS G++ A +R
Sbjct: 432 PTAAVWGALLGSCRMHKNAKIGQFAADHVFELDPDDTGPPVLLYNIYASTGQWDAAARVR 491
Query: 454 KNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDS 513
K M+ V K P CSW+E+E VHMF D +HP I + E+I +R+AGY P++
Sbjct: 492 KMMKATGVKKEPACSWVEIENSVHMFVAND-DTHPRSEEIYKKWEEISIQIRKAGYVPNT 550
Query: 514 SFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKV 573
+VL VDE+E+ L+YHSEK+A+A+ L+ +P G IR+MKN+R+CGDCHSA + ISKV
Sbjct: 551 DYVLLHVDEQERQAKLQYHSEKIALAFALINMPLGATIRIMKNIRICGDCHSAFRYISKV 610
Query: 574 MGREIILRDANRFHHFKDGLCSCRDYW 600
REI++RD NRFHHF G CSC DYW
Sbjct: 611 FKREIVVRDTNRFHHFSSGSCSCGDYW 637
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 120/264 (45%), Gaps = 16/264 (6%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM------PEKNVVSWTVMLGGFIRDSRID 54
MP R++ SWT+++ GY + M EA L M P + + G S I
Sbjct: 125 MPARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIG 184
Query: 55 DARRLFDMMPE--KDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+ + + DV + ++ Y + GR+D +FD++ KN +SW +I+G+
Sbjct: 185 EQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARK 244
Query: 113 NRIDVARKLFEVMP----EKNEVSWTAMLMGYTQCGRI-QDAW---ELFKAMPMKSVVAS 164
+ +F M E +++++ G + Q W + K+ S
Sbjct: 245 GDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVG 304
Query: 165 NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVR 224
N+++ ++G + AR VFD++ +KD TW+ M+ + + G E + F M+K GV
Sbjct: 305 NTILDMYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVH 364
Query: 225 VNFPSLISVLSVCASLASLDHGRQ 248
+N + +S+L+ C+ + G+Q
Sbjct: 365 LNQITFLSILTACSHGGLVKEGKQ 388
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 87/173 (50%), Gaps = 2/173 (1%)
Query: 232 SVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASK 291
S+++ CA SLD R +HA L QF V++ + LI +Y KCG + + +FD ++
Sbjct: 69 SLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMPAR 128
Query: 292 DIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIF 351
D+ W S+I+GYAQ + +++L + M P+ T +L A + G +I
Sbjct: 129 DMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQI- 187
Query: 352 ESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLG 404
++ KY + ++D+ R G+++ A+ + + + + + W +L+
Sbjct: 188 HALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLE-SKNGVSWNALIA 239
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 65/140 (46%), Gaps = 12/140 (8%)
Query: 41 TVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPK---- 96
+L + + + DAR++FD + +KDVV +M+ + Q G E F+EM K
Sbjct: 305 NTILDMYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVH 364
Query: 97 KNVISWTTMISGYVNNNRIDVARKLFEVM------PEKNEVSWTAMLMGYTQCGRIQDAW 150
N I++ ++++ + + ++ F++M PE + L+G + G + DA
Sbjct: 365 LNQITFLSILTACSHGGLVKEGKQYFDMMKEYNLEPEIDHYVTVVDLLG--RAGLLNDAL 422
Query: 151 ELFKAMPMKSVVASNSMILG 170
MPMK A +LG
Sbjct: 423 VFIFKMPMKPTAAVWGALLG 442
>gi|225447423|ref|XP_002276196.1| PREDICTED: pentatricopeptide repeat-containing protein At3g12770
[Vitis vinifera]
gi|296081235|emb|CBI17979.3| unnamed protein product [Vitis vinifera]
Length = 742
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 232/616 (37%), Positives = 360/616 (58%), Gaps = 18/616 (2%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSR----IDDA 56
PE +V W A++RGY +A ++ +M V L ++ ++
Sbjct: 129 FPEPSVFLWNAIIRGYSSHNFFGDAIEMYSRMQASGVNPDGFTLPCVLKACSGVPVLEVG 188
Query: 57 RR----LFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+R +F + E DV Q +V Y + GRV++ R +F+ + +N++SWT+MISGY N
Sbjct: 189 KRVHGQIFRLGFESDVFVQNGLVALYAKCGRVEQARIVFEGLDDRNIVSWTSMISGYGQN 248
Query: 113 NRIDVARKLFEVMPEKN-EVSWTAM---LMGYTQCGRIQDAWELFKAMPMKSVVASNSMI 168
A ++F M ++N + W A+ L YT ++ + + + ++
Sbjct: 249 GLPMEALRIFGQMRQRNVKPDWIALVSVLRAYTDVEDLEQGKSIHGCVVKMGLEFEPDLL 308
Query: 169 LGL----GQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVR 224
+ L + G+V AR FDQM + W+ MI Y + GY E + LF M + +R
Sbjct: 309 ISLTAMYAKCGQVMVARSFFDQMEIPNVMMWNAMISGYAKNGYTNEAVGLFQEMISKNIR 368
Query: 225 VNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLI 284
+ ++ S + CA + SLD + + + + ++ DV+V + LI M+ KCG + + +
Sbjct: 369 TDSITVRSAILACAQVGSLDLAKWMGDYINKTEYRNDVFVNTALIDMFAKCGSVDLAREV 428
Query: 285 FDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKV 344
FD KD+V+W+++I GY +G G+ ++ +F+ M +GV P+DVT VG+L+AC+++G V
Sbjct: 429 FDRTLDKDVVVWSAMIVGYGLHGRGQDAIDLFYAMKQAGVCPNDVTFVGLLTACNHSGLV 488
Query: 345 KEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLG 404
+EG E+F SMK Y +E + +HYAC+VDLLGR+G + +A I MP EP +WG+LLG
Sbjct: 489 EEGWELFHSMK-YYGIEARHQHYACVVDLLGRSGHLNEAYDFITTMPIEPGVSVWGALLG 547
Query: 405 ACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKP 464
AC+ + + L E AA++L L+P N G Y+ LSN+YAS + VA++R MR++ + K
Sbjct: 548 ACKIYRHVTLGEYAAEQLFSLDPFNTGHYVQLSNLYASSRLWDSVAKVRILMREKGLSKD 607
Query: 465 PGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEE 524
G S IE+ K+ F D SHP I LE + L+EAG+ P VLHD+++EE
Sbjct: 608 LGYSLIEINGKLQAFRVGD-KSHPRFKEIFEELESLERRLKEAGFIPHIESVLHDLNQEE 666
Query: 525 KVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDAN 584
K +L HSE+LA+AYGL+ G +R+ KNLR C +CHSA KLISK++ REI++RDAN
Sbjct: 667 KEETLCNHSERLAIAYGLISTAPGTTLRITKNLRACINCHSATKLISKLVNREIVVRDAN 726
Query: 585 RFHHFKDGLCSCRDYW 600
RFHHFK+G+CSCRDYW
Sbjct: 727 RFHHFKNGVCSCRDYW 742
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/343 (22%), Positives = 164/343 (47%), Gaps = 47/343 (13%)
Query: 103 TTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKS-- 160
T ++ N I ARK+F+ PE + W A++ GY+ DA E++ M
Sbjct: 107 TKFVNASWNIGEIGYARKVFDEFPEPSVFLWNAIIRGYSSHNFFGDAIEMYSRMQASGVN 166
Query: 161 -------------------------------------VVASNSMILGLGQNGEVQKARVV 183
V N ++ + G V++AR+V
Sbjct: 167 PDGFTLPCVLKACSGVPVLEVGKRVHGQIFRLGFESDVFVQNGLVALYAKCGRVEQARIV 226
Query: 184 FDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASL 243
F+ + +++ +W+ MI Y + G +E + +F M++ V+ ++ +L+SVL + L
Sbjct: 227 FEGLDDRNIVSWTSMISGYGQNGLPMEALRIFGQMRQRNVKPDWIALVSVLRAYTDVEDL 286
Query: 244 DHGRQVHAQLVR--CQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIIS 301
+ G+ +H +V+ +F+ D+ ++ L MY KCG+++ + FD +++MWN++IS
Sbjct: 287 EQGKSIHGCVVKMGLEFEPDLLIS--LTAMYAKCGQVMVARSFFDQMEIPNVMMWNAMIS 344
Query: 302 GYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESM-KSKYLV 360
GYA+ G +++ +F EM S + D +T+ + AC+ G + + + + + K++Y
Sbjct: 345 GYAKNGYTNEAVGLFQEMISKNIRTDSITVRSAILACAQVGSLDLAKWMGDYINKTEYRN 404
Query: 361 EPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
+ ++D+ + G V+ A ++ + + D ++W +++
Sbjct: 405 DVFVN--TALIDMFAKCGSVDLAREVFDRT-LDKDVVVWSAMI 444
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 126/231 (54%), Gaps = 2/231 (0%)
Query: 175 GEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVL 234
GE+ AR VFD+ E W+ +I+ Y + + I++++ MQ GV + +L VL
Sbjct: 117 GEIGYARKVFDEFPEPSVFLWNAIIRGYSSHNFFGDAIEMYSRMQASGVNPDGFTLPCVL 176
Query: 235 SVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIV 294
C+ + L+ G++VH Q+ R F+ DV+V + L+ +Y KCG + + +++F+ ++IV
Sbjct: 177 KACSGVPVLEVGKRVHGQIFRLGFESDVFVQNGLVALYAKCGRVEQARIVFEGLDDRNIV 236
Query: 295 MWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESM 354
W S+ISGY Q GL ++L++F +M V PD + LV VL A + +++G+ I
Sbjct: 237 SWTSMISGYGQNGLPMEALRIFGQMRQRNVKPDWIALVSVLRAYTDVEDLEQGKSI-HGC 295
Query: 355 KSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
K +E + + + + + GQV A + M P+ ++W +++
Sbjct: 296 VVKMGLEFEPDLLISLTAMYAKCGQVMVARSFFDQMEI-PNVMMWNAMISG 345
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 87/193 (45%), Gaps = 15/193 (7%)
Query: 245 HGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYA 304
H Q+HAQLV ++ + + GE+ + +FD F + +WN+II GY+
Sbjct: 86 HLNQIHAQLVVSGLVESGFLVTKFVNASWNIGEIGYARKVFDEFPEPSVFLWNAIIRGYS 145
Query: 305 QYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACS-----YTGKVKEGREIFESMKSKYL 359
+ +++++ M +SGV PD TL VL ACS GK G+ +S
Sbjct: 146 SHNFFGDAIEMYSRMQASGVNPDGFTLPCVLKACSGVPVLEVGKRVHGQIFRLGFESDVF 205
Query: 360 VEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAA 419
V+ +V L + G+VE A + E + + + + W S++ + + L A
Sbjct: 206 VQNG------LVALYAKCGRVEQARIVFEGLD-DRNIVSWTSMISG---YGQNGLPMEAL 255
Query: 420 KKLLQLEPKNAGP 432
+ Q+ +N P
Sbjct: 256 RIFGQMRQRNVKP 268
>gi|357148182|ref|XP_003574661.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Brachypodium distachyon]
Length = 553
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 209/501 (41%), Positives = 320/501 (63%), Gaps = 2/501 (0%)
Query: 1 MPERNVVSWTAMVRGYVEEGM-ITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRL 59
MP R+VVSW A++ G + A LF MP +NV+SW ++ G + +D A
Sbjct: 33 MPRRDVVSWNALLTALWRAGRDLPAARRLFDDMPSRNVISWNSVVAGCLAHGDLDAASAY 92
Query: 60 FDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVAR 119
F P ++V + M+ G + GR+D+ +F EMP++NV+S+TTM+ G + AR
Sbjct: 93 FARAPRRNVASWNAMLAGLVRLGRMDDAWALFGEMPQRNVVSYTTMVDGLARRGEVARAR 152
Query: 120 KLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQK 179
++F+ MPE+N VSW AM+ GY + +A +LF+AMP K+VVA +MI G ++G+V+
Sbjct: 153 EVFDAMPERNLVSWAAMITGYVENAMFDEARKLFEAMPDKNVVACTAMITGYCKDGDVES 212
Query: 180 ARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCAS 239
AR +FD + KD +W+ MI Y G+ E + L +M +EGV+ + +LI++L+ C++
Sbjct: 213 ARRLFDGIPVKDVISWNAMITGYVHNGHGEEAMKLHIIMFREGVKPDHATLIAILTACSA 272
Query: 240 LASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSI 299
LA L GR HA + + + L+TMY KCG + + +L+F N +DIV WN+I
Sbjct: 273 LALLRQGRSTHAVATKTMLESSTSFCNALMTMYSKCGNVGESELVFMNLKIQDIVSWNTI 332
Query: 300 ISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYL 359
I+ YAQ+G +K++ +FHEM + G++P+D+T++ +LSAC + G+V + E+F+ M SKY
Sbjct: 333 IAAYAQHGKYQKAIALFHEMETRGLIPNDITILSMLSACGHVGRVNDSLELFDLMSSKYA 392
Query: 360 VEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAA 419
+ P EHYAC+VD+LGRAGQ+E A I+ MPFE + +WG+LLGA +TH + L E+AA
Sbjct: 393 ISPSAEHYACVVDILGRAGQLEKACSYIKKMPFEAERNVWGALLGASKTHGNVQLGELAA 452
Query: 420 KKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMF 479
K L+Q + ++GPY++LSNIYA+ G + +V +R M+++ V K PG SW E+ KV+MF
Sbjct: 453 KMLVQSDSVSSGPYVMLSNIYAAAGMWGEVNRVRGQMKEKGVKKQPGYSWTEIANKVNMF 512
Query: 480 TGRDCVSHPEHPMIMRMLEKI 500
G D SHPE I+ L KI
Sbjct: 513 VGGDA-SHPEMNKIISELRKI 532
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 125/426 (29%), Positives = 206/426 (48%), Gaps = 49/426 (11%)
Query: 44 LGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGR-VDEGREIFDEMPKKNVISW 102
+ R + ARR+FD MP +DVV+ ++ + GR + R +FD+MP +NVISW
Sbjct: 14 ITALARAGDVAAARRVFDAMPRRDVVSWNALLTALWRAGRDLPAARRLFDDMPSRNVISW 73
Query: 103 TTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVV 162
++++G + + +D A F P +N SW AML G + GR+ DAW LF MP ++VV
Sbjct: 74 NSVVAGCLAHGDLDAASAYFARAPRRNVASWNAMLAGLVRLGRMDDAWALFGEMPQRNVV 133
Query: 163 ASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEG 222
+ +M+ GL + GEV +AR VFD M E++ +W+ MI Y E LF M
Sbjct: 134 SYTTMVDGLARRGEVARAREVFDAMPERNLVSWAAMITGYVENAMFDEARKLFEAMP--- 190
Query: 223 VRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGK 282
D +V + +IT Y K G++ +
Sbjct: 191 ------------------------------------DKNVVACTAMITGYCKDGDVESAR 214
Query: 283 LIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTG 342
+FD KD++ WN++I+GY G GE+++K+ MF GV PD TL+ +L+ACS
Sbjct: 215 RLFDGIPVKDVISWNAMITGYVHNGHGEEAMKLHIIMFREGVKPDHATLIAILTACSALA 274
Query: 343 KVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSL 402
+++GR ++ +K ++E T ++ + + G V ++ + + + D + W ++
Sbjct: 275 LLRQGRST-HAVATKTMLESSTSFCNALMTMYSKCGNVGESELVFMNLKIQ-DIVSWNTI 332
Query: 403 LGACRTHMKLDLAEVAAKKLLQLEPKNAGP--YILLSNIYASQ--GRFHDVAELRKNMRK 458
+ A H K + A ++E + P +LS + A GR +D EL M
Sbjct: 333 IAAYAQHGKY---QKAIALFHEMETRGLIPNDITILSMLSACGHVGRVNDSLELFDLMSS 389
Query: 459 RNVIKP 464
+ I P
Sbjct: 390 KYAISP 395
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 111/251 (44%), Gaps = 23/251 (9%)
Query: 156 MPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVI-DL 214
+ + +V N I L + G+V AR VFD M +D +W+ ++ R G +L L
Sbjct: 2 LATRLLVRDNQRITALARAGDVAAARRVFDAMPRRDVVSWNALLTALWRAGRDLPAARRL 61
Query: 215 FTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIK 274
F M N S SV++ C + LD A+ R +V + ++ ++
Sbjct: 62 FDDMPSR----NVISWNSVVAGCLAHGDLDAASAYFARAPR----RNVASWNAMLAGLVR 113
Query: 275 CGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGV 334
G + +F +++V + +++ G A+ G ++ +VF M ++ + G
Sbjct: 114 LGRMDDAWALFGEMPQRNVVSYTTMVDGLARRGEVARAREVFDAMPERNLVSWAAMITGY 173
Query: 335 LSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLG--RAGQVEDAMKLIEAMPF 392
+ + E R++FE+M K +V AC + G + G VE A +L + +P
Sbjct: 174 VENAMF----DEARKLFEAMPDKNVV-------ACTAMITGYCKDGDVESARRLFDGIPV 222
Query: 393 EPDAIIWGSLL 403
+ D I W +++
Sbjct: 223 K-DVISWNAMI 232
>gi|222641140|gb|EEE69272.1| hypothetical protein OsJ_28537 [Oryza sativa Japonica Group]
Length = 784
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 233/645 (36%), Positives = 362/645 (56%), Gaps = 48/645 (7%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDM 62
E++V + A+V YV+ G + A +F +MP+ +VVSW ++ G + + A L
Sbjct: 141 EKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQ 200
Query: 63 MPEKDVVAQTNM---VLGYCQD-GRVDEGREIFDEMPKKNVIS----WTTMISGYVNNNR 114
M +V M +L C G D GR+I M K N S ++ Y N+
Sbjct: 201 MKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHF 260
Query: 115 IDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAM----------PMKSVVAS 164
+D A K+F+ M ++ + W A++ G + GR +A+ +F + + +V+ S
Sbjct: 261 LDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKS 320
Query: 165 NSMILGLGQNGEVQK-----------------------------ARVVFDQMREKDDATW 195
+ + +V A VF++ D
Sbjct: 321 TASLEAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAV 380
Query: 196 SGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVR 255
+ MI + + I LF M ++G+ + L S+L+ CASL++ + G+QVHA L++
Sbjct: 381 TSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIK 440
Query: 256 CQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKV 315
QF D + + L+ Y KCG + +L F + + +V W+++I G AQ+G G+++L++
Sbjct: 441 RQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALEL 500
Query: 316 FHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLG 375
F M G+ P+ +T+ VL AC++ G V E + F SMK + ++ EHY+CM+DLLG
Sbjct: 501 FGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLG 560
Query: 376 RAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYIL 435
RAG+++DAM+L+ +MPF+ +A +WG+LLGA R H +L ++AA+KL LEP+ +G ++L
Sbjct: 561 RAGKLDDAMELVNSMPFQANASVWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVL 620
Query: 436 LSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMR 495
L+N YAS G +++VA++RK M+ N+ K P SW+EV+ KVH F D SHP I
Sbjct: 621 LANTYASSGMWNEVAKVRKLMKDSNIKKEPAMSWVEVKDKVHTFIVGD-KSHPMTKEIYS 679
Query: 496 MLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMK 555
L+++G L+ +AGY P+ LHD+D EK L +HSE+LAVA+ L+ P G PIRV K
Sbjct: 680 KLDELGDLMSKAGYIPNVDVDLHDLDRSEKELLLSHHSERLAVAFALLSTPPGAPIRVKK 739
Query: 556 NLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
NLR+C DCH A K IS ++ REII+RD NRFHHF+DG CSC DYW
Sbjct: 740 NLRICRDCHMAFKFISNIVSREIIIRDINRFHHFRDGTCSCGDYW 784
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 118/423 (27%), Positives = 193/423 (45%), Gaps = 18/423 (4%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEA----GTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARR 58
ERN VSW ++ YV+ +A G + W + ++ ++ ID R+
Sbjct: 71 ERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQ 130
Query: 59 LFDMMP----EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNR 114
+ M+ EKDV +V Y + GRVD IF++MP +V+SW +ISG V N
Sbjct: 131 VHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGH 190
Query: 115 IDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMP--MKSVVASNSMILGLG 172
A +L M V ML + A++L + + M A + +G+G
Sbjct: 191 DHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVG 250
Query: 173 ------QNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVN 226
+N + A VFD M +D W+ +I G E +F ++KEG+ VN
Sbjct: 251 LVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVN 310
Query: 227 FPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFD 286
+L +VL ASL + RQVHA + F D +V + LI Y KC L +F+
Sbjct: 311 RTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFE 370
Query: 287 NFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKE 346
+S DI+ S+I+ +Q GE ++K+F EM G+ PD L +L+AC+ ++
Sbjct: 371 ECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQ 430
Query: 347 GREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGAC 406
G+++ + + + A +V + G +EDA ++P E + W +++G
Sbjct: 431 GKQVHAHLIKRQFMSDAFAGNA-LVYTYAKCGSIEDAELAFSSLP-ERGVVSWSAMIGGL 488
Query: 407 RTH 409
H
Sbjct: 489 AQH 491
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 110/444 (24%), Positives = 194/444 (43%), Gaps = 49/444 (11%)
Query: 66 KDVVAQTNMVLGYCQDGRVDEGREIFDEM-PKKNVISWTTMISGYVNNNRIDVARKLFEV 124
DV +V Y G +D+ R +FDE ++N +SW ++S YV N++ A ++F
Sbjct: 40 SDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGE 99
Query: 125 MP----EKNEVSWTAMLMGYTQCGRIQDAWELFKAMPM-----KSVVASNSMILGLGQNG 175
M + E ++ ++ T I DA AM + K V +N+++ + G
Sbjct: 100 MVWSGIQPTEFGFSCVVNACTGSRNI-DAGRQVHAMVVRMGYEKDVFTANALVDMYVKMG 158
Query: 176 EVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLS 235
V A V+F++M + D +W+ +I G++ I+L M+ G+ N L S+L
Sbjct: 159 RVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILK 218
Query: 236 VCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVM 295
CA + D GRQ+H +++ D D Y+ L+ MY K L +FD + +D+++
Sbjct: 219 ACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLIL 278
Query: 296 WNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGV------LSACSYTGKVKEGRE 349
WN++ISG + G +++ +F+ + G+ + TL V L A S T +V E
Sbjct: 279 WNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAE 338
Query: 350 IFESMKSKYLVEPKTEHY---AC---------------------MVDLLGRAGQVEDAMK 385
+ ++V + Y +C M+ L + E A+K
Sbjct: 339 KIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIK 398
Query: 386 LIEAM---PFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQ---LEPKNAGPYILLSNI 439
L M EPD + SLL AC + + + L++ + AG ++ +
Sbjct: 399 LFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYT-- 456
Query: 440 YASQGRFHDVAELRKNMRKRNVIK 463
YA G D ++ +R V+
Sbjct: 457 YAKCGSIEDAELAFSSLPERGVVS 480
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 121/253 (47%), Gaps = 21/253 (8%)
Query: 218 MQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGE 277
M+ EGV N +L VL C A L G QVHA + F DV+VA+ L+ MY G
Sbjct: 1 MRAEGVCCNEFALPVVLK-CVPDAQL--GAQVHAMAMATGFGSDVFVANALVAMYGGFGF 57
Query: 278 LVKGKLIFDNFAS-KDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLS 336
+ + +FD S ++ V WN ++S Y + +++VF EM SG+ P + V++
Sbjct: 58 MDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVN 117
Query: 337 ACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDA 396
AC+ + + GR++ +M + E +VD+ + G+V+ A + E MP + D
Sbjct: 118 ACTGSRNIDAGRQV-HAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMP-DSDV 175
Query: 397 IIWGSLLGAC----RTHMKLDLAEVAAKKLLQLEPKNAGPYI-LLSNIY---ASQGRFHD 448
+ W +L+ C H ++L LLQ++ P + +LS+I A G F
Sbjct: 176 VSWNALISGCVLNGHDHRAIEL-------LLQMKSSGLVPNVFMLSSILKACAGAGAFDL 228
Query: 449 VAELRKNMRKRNV 461
++ M K N
Sbjct: 229 GRQIHGFMIKANA 241
>gi|224140549|ref|XP_002323645.1| predicted protein [Populus trichocarpa]
gi|222868275|gb|EEF05406.1| predicted protein [Populus trichocarpa]
Length = 682
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 242/617 (39%), Positives = 358/617 (58%), Gaps = 23/617 (3%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRD-SRIDDARRLFD 61
E N+ + M+RG V E+ ++ M ++ + + ++ +R+ D+
Sbjct: 70 EPNIFLFNTMIRGLVLNDCFQESIEIYHSMRKEGLSPDSFTFPFVLKACARVLDSELGVK 129
Query: 62 MMP-------EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNR 114
M E D + +++ Y + G +D ++FD++P KN SWT ISGYV +
Sbjct: 130 MHSLVVKAGCEADAFVKISLINLYTKCGFIDNAFKVFDDIPDKNFASWTATISGYVGVGK 189
Query: 115 ----IDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDA-W--ELFKAMPM-KSVVASNS 166
ID+ R+L E+ + S +L + G ++ W E M ++V + +
Sbjct: 190 CREAIDMFRRLLEMGLRPDSFSLVEVLSACKRTGDLRSGEWIDEYITENGMVRNVFVATA 249
Query: 167 MILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVN 226
++ G+ G +++AR VFD M EK+ +WS MI+ Y G E +DLF M EG++ +
Sbjct: 250 LVDFYGKCGNMERARSVFDGMLEKNIVSWSSMIQGYASNGLPKEALDLFFKMLNEGLKPD 309
Query: 227 FPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFD 286
+++ VL CA L +L+ G + +F + + + LI MY KCG + + +F
Sbjct: 310 CYAMVGVLCSCARLGALELGDWASNLINGNEFLDNSVLGTALIDMYAKCGRMDRAWEVFR 369
Query: 287 NFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKE 346
KD V+WN+ ISG A G + +L +F +M SG+ PD T VG+L AC++ G V+E
Sbjct: 370 GMRKKDRVVWNAAISGLAMSGHVKDALGLFGQMEKSGIKPDRNTFVGLLCACTHAGLVEE 429
Query: 347 GREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGAC 406
GR F SM+ + + P+ EHY CMVDLLGRAG +++A +LI++MP E +AI+WG+LLG C
Sbjct: 430 GRRYFNSMECVFTLTPEIEHYGCMVDLLGRAGCLDEAHQLIKSMPMEANAIVWGALLGGC 489
Query: 407 RTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPG 466
R H L EV KKL+ LEP ++G Y+LLSNIYA+ ++ + A++R M +R V K PG
Sbjct: 490 RLHRDTQLVEVVLKKLIALEPWHSGNYVLLSNIYAASHKWEEAAKIRSIMSERGVKKIPG 549
Query: 467 CSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGL---LREAGYCPDSSFVLHDVDEE 523
SWIEV+ VH F V HP+ ++ K+G L L+ AGY P + VL D++EE
Sbjct: 550 YSWIEVDGVVHQFL----VGDTSHPLSEKIYAKLGELAKDLKAAGYVPTTDHVLFDIEEE 605
Query: 524 EKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDA 583
EK H + HSEKLAVA+GL+ I V+KNLRVCGDCH AIK IS++ GREII+RD
Sbjct: 606 EKEHFIGCHSEKLAVAFGLISTAPNDKILVVKNLRVCGDCHEAIKHISRIAGREIIVRDN 665
Query: 584 NRFHHFKDGLCSCRDYW 600
NRFH F DGLCSC+DYW
Sbjct: 666 NRFHCFTDGLCSCKDYW 682
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 114/270 (42%), Gaps = 51/270 (18%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV----VSWTVMLGGFIRDSRIDDA 56
+P++N SWTA + GYV G EA +F ++ E + S +L R +
Sbjct: 169 IPDKNFASWTATISGYVGVGKCREAIDMFRRLLEMGLRPDSFSLVEVLSACKRTGDLRSG 228
Query: 57 RRLFDMMPE----KDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+ + + E ++V T +V Y + G ++ R +FD M +KN++SW++MI GY +N
Sbjct: 229 EWIDEYITENGMVRNVFVATALVDFYGKCGNMERARSVFDGMLEKNIVSWSSMIQGYASN 288
Query: 113 NRIDVARKLFEVMPEK---------------------------------------NEVSW 133
A LF M + N V
Sbjct: 289 GLPKEALDLFFKMLNEGLKPDCYAMVGVLCSCARLGALELGDWASNLINGNEFLDNSVLG 348
Query: 134 TAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREK--- 190
TA++ Y +CGR+ AWE+F+ M K V N+ I GL +G V+ A +F QM +
Sbjct: 349 TALIDMYAKCGRMDRAWEVFRGMRKKDRVVWNAAISGLAMSGHVKDALGLFGQMEKSGIK 408
Query: 191 -DDATWSGMIKVYERKGYELEVIDLFTLMQ 219
D T+ G++ G E F M+
Sbjct: 409 PDRNTFVGLLCACTHAGLVEEGRRYFNSME 438
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 71/152 (46%), Gaps = 1/152 (0%)
Query: 240 LASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSI 299
+ L H + +HA L+R D D Y+ + ++ G I D +I ++N++
Sbjct: 20 FSCLKHLKHIHAALLRLGLDEDTYLLNKVLRFSFNFGNTNYSFRILDQTKEPNIFLFNTM 79
Query: 300 ISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYL 359
I G ++S++++H M G+ PD T VL AC+ + G ++ S+ K
Sbjct: 80 IRGLVLNDCFQESIEIYHSMRKEGLSPDSFTFPFVLKACARVLDSELGVKM-HSLVVKAG 138
Query: 360 VEPKTEHYACMVDLLGRAGQVEDAMKLIEAMP 391
E +++L + G +++A K+ + +P
Sbjct: 139 CEADAFVKISLINLYTKCGFIDNAFKVFDDIP 170
>gi|413918610|gb|AFW58542.1| hypothetical protein ZEAMMB73_242801 [Zea mays]
Length = 941
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 227/642 (35%), Positives = 355/642 (55%), Gaps = 50/642 (7%)
Query: 7 VSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMM--- 63
+ A++ Y + G + A +F Q+ EK+ +SW ML ++++S +A F M
Sbjct: 302 IQCNALLVMYAKYGRVDSALRVFGQIAEKDYISWNSMLSCYVQNSFYAEAIDFFGEMLQH 361
Query: 64 ---PEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVIS----WTTMISGYVNNNRID 116
P+ V + LG+ R++ GRE K+ + + T++ Y+ I+
Sbjct: 362 GFQPDHACVVSLSSALGHLS--RLNNGREFHAYAIKQRLHTDLQVGNTLMDMYIKCGSIE 419
Query: 117 VARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMI-------L 169
+ K+FE M ++ +SWT +L + Q R +A E+ + + ++ + MI
Sbjct: 420 CSAKVFESMGIRDHISWTTILACFAQSSRHSEALEMILELQKEGIMVDSMMIGSILETCC 479
Query: 170 GL-------------------------------GQNGEVQKARVVFDQMREKDDATWSGM 198
GL G+ GE + +F ++ +KD +W+ M
Sbjct: 480 GLKSISLLKQVHCYAIRNGLLDLILENRLIDIYGECGEFDHSLNLFQRVEKKDIVSWTSM 539
Query: 199 IKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQF 258
I G + LFT MQK ++ + +L+S+L A L+SL G+QVH L+R F
Sbjct: 540 INCCTNNGRLNGAVFLFTEMQKANIQPDSVALVSILVAIAGLSSLTKGKQVHGFLIRRNF 599
Query: 259 DVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHE 318
++ V S L+ MY CG + +F+ KD+V+W ++I+ +G G++++ +F
Sbjct: 600 PIEGPVVSSLVDMYSGCGSMNYAIRVFERAKCKDVVLWTAMINATGMHGHGKQAIDLFKR 659
Query: 319 MFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAG 378
M +G+ PD V+ + +L ACS++ V+EG+ + M SKY ++P EHYAC+VD+LGR+G
Sbjct: 660 MLQTGLTPDHVSFLALLYACSHSKLVEEGKHYLDIMVSKYRLKPWQEHYACVVDILGRSG 719
Query: 379 QVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSN 438
Q E+A + I+ MP +P + +W +LLGACR H LA VAA KLL+LEP N G YIL+SN
Sbjct: 720 QTEEAYEFIKTMPMDPKSAVWCALLGACRVHRNYGLAVVAANKLLELEPDNPGNYILVSN 779
Query: 439 IYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLE 498
++A G++++ E R M +R + K P CSWIE+ +H FT D + +++ E
Sbjct: 780 VFAEMGKWNNAKETRTRMAERGLRKNPACSWIEIGNNIHTFTSGDYCHRDSEAIHLKLSE 839
Query: 499 KIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLR 558
L RE GY D+ FVLHD EEEK+ L HSE++A+A+GL+ G+PIR+ KNLR
Sbjct: 840 ITEMLRREGGYVEDTRFVLHDTSEEEKIDMLHKHSERIAIAFGLISTRPGMPIRIAKNLR 899
Query: 559 VCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
VCGDCH KL+SK+ R+I++RDANRFHHF G CSC D+W
Sbjct: 900 VCGDCHEFTKLVSKLFERDIVVRDANRFHHFSGGSCSCEDFW 941
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 106/459 (23%), Positives = 205/459 (44%), Gaps = 58/459 (12%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMM------ 63
T +V Y G + +A LF MP + V SW ++G ++ +A R++ M
Sbjct: 99 TKLVFMYGRCGRVDDARRLFNGMPARTVFSWNALVGAYLSSGSAGEAMRVYGAMRASAAP 158
Query: 64 ---PEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPK----KNVISWTTMISGYVNNNRID 116
P+ +A G DGR G E+ K K+ + +I Y +D
Sbjct: 159 GSAPDGCTLASVLKACGAEGDGRC--GGEVHGLAVKVGLDKSTLVANALIGMYAKCGLLD 216
Query: 117 VARKLFEVMPE--KNEVSWTAMLMGYTQCGRIQDAWELFKAM-----PMKSV-------- 161
A ++FE + + ++ SW +++ G Q GR +A LF+ M PM S
Sbjct: 217 SALRVFEWLQQDARDVASWNSVVSGCVQNGRTLEALALFRGMQSAGFPMNSYTSVAVLQV 276
Query: 162 -------------------------VASNSMILGLGQNGEVQKARVVFDQMREKDDATWS 196
+ N++++ + G V A VF Q+ EKD +W+
Sbjct: 277 CAELGLLSLGRELHAALLKCGSELNIQCNALLVMYAKYGRVDSALRVFGQIAEKDYISWN 336
Query: 197 GMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRC 256
M+ Y + + E ID F M + G + + ++S+ S L+ L++GR+ HA ++
Sbjct: 337 SMLSCYVQNSFYAEAIDFFGEMLQHGFQPDHACVVSLSSALGHLSRLNNGREFHAYAIKQ 396
Query: 257 QFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVF 316
+ D+ V + L+ MYIKCG + +F++ +D + W +I++ +AQ ++L++
Sbjct: 397 RLHTDLQVGNTLMDMYIKCGSIECSAKVFESMGIRDHISWTTILACFAQSSRHSEALEMI 456
Query: 317 HEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGR 376
E+ G+M D + + +L C + +++ L++ E+ ++D+ G
Sbjct: 457 LELQKEGIMVDSMMIGSILETCCGLKSISLLKQVHCYAIRNGLLDLILENR--LIDIYGE 514
Query: 377 AGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLA 415
G+ + ++ L + + + D + W S++ C + +L+ A
Sbjct: 515 CGEFDHSLNLFQRVE-KKDIVSWTSMINCCTNNGRLNGA 552
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 98/355 (27%), Positives = 171/355 (48%), Gaps = 17/355 (4%)
Query: 65 EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEV 124
+ D T +V Y + GRVD+ R +F+ MP + V SW ++ Y+++ A +++
Sbjct: 92 DDDGFLATKLVFMYGRCGRVDDARRLFNGMPARTVFSWNALVGAYLSSGSAGEAMRVYGA 151
Query: 125 M---------PEKNEVSWTAMLMGYTQCGRIQDAWE--LFKAMPMKSVVASNSMILGLGQ 173
M P+ ++ G GR K KS + +N++I +
Sbjct: 152 MRASAAPGSAPDGCTLASVLKACGAEGDGRCGGEVHGLAVKVGLDKSTLVANALIGMYAK 211
Query: 174 NGEVQKARVVFD--QMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLI 231
G + A VF+ Q +D A+W+ ++ + G LE + LF MQ G +N + +
Sbjct: 212 CGLLDSALRVFEWLQQDARDVASWNSVVSGCVQNGRTLEALALFRGMQSAGFPMNSYTSV 271
Query: 232 SVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASK 291
+VL VCA L L GR++HA L++C ++++ ++L+ MY K G + +F A K
Sbjct: 272 AVLQVCAELGLLSLGRELHAALLKCGSELNIQCNALLV-MYAKYGRVDSALRVFGQIAEK 330
Query: 292 DIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIF 351
D + WNS++S Y Q +++ F EM G PD +V + SA + ++ GRE F
Sbjct: 331 DYISWNSMLSCYVQNSFYAEAIDFFGEMLQHGFQPDHACVVSLSSALGHLSRLNNGRE-F 389
Query: 352 ESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGAC 406
+ K + + ++D+ + G +E + K+ E+M D I W ++L AC
Sbjct: 390 HAYAIKQRLHTDLQVGNTLMDMYIKCGSIECSAKVFESMGIR-DHISWTTIL-AC 442
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 83/168 (49%), Gaps = 8/168 (4%)
Query: 246 GRQVHAQLVRC---QFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISG 302
GRQVHA V D D ++A+ L+ MY +CG + + +F+ ++ + WN+++
Sbjct: 76 GRQVHAHAVTTGSLNEDDDGFLATKLVFMYGRCGRVDDARRLFNGMPARTVFSWNALVGA 135
Query: 303 YAQYGLGEKSLKVFHEMFSS---GVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYL 359
Y G ++++V+ M +S G PD TL VL AC G + G E+ + K
Sbjct: 136 YLSSGSAGEAMRVYGAMRASAAPGSAPDGCTLASVLKACGAEGDGRCGGEV-HGLAVKVG 194
Query: 360 VEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEP-DAIIWGSLLGAC 406
++ T ++ + + G ++ A+++ E + + D W S++ C
Sbjct: 195 LDKSTLVANALIGMYAKCGLLDSALRVFEWLQQDARDVASWNSVVSGC 242
>gi|356570253|ref|XP_003553304.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Glycine max]
Length = 815
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 239/718 (33%), Positives = 378/718 (52%), Gaps = 119/718 (16%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVV----SWTVMLGGFIRDSRIDD- 55
M +R+VV+WT ++ GY + EA LF M +V + +L GF +++
Sbjct: 99 MVQRSVVTWTMLIGGYAQHNRFLEAFNLFADMCRHGMVPDHITLATLLSGFTEFESVNEV 158
Query: 56 ----------------------------------ARRLFDMMPEKDVVAQTNMVLGYCQD 81
A LF M EKD V ++ GY ++
Sbjct: 159 AQVHGHVVKVGYDSTLMVCNSLLDSYCKTRSLGLACHLFKHMAEKDNVTFNALLTGYSKE 218
Query: 82 GRVDEGREIFDEM------PKK---------------------------------NVISW 102
G + +F +M P + NV
Sbjct: 219 GFNHDAINLFFKMQDLGFRPSEFTFAAVLTAGIQMDDIEFGQQVHSFVVKCNFVWNVFVA 278
Query: 103 TTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAM------ 156
++ Y ++RI ARKLF MPE + +S+ ++ GR++++ ELF+ +
Sbjct: 279 NALLDFYSKHDRIVEARKLFYEMPEVDGISYNVLITCCAWNGRVEESLELFRELQFTRFD 338
Query: 157 ----PMKSV--VASNSMILGLGQNGEVQ---------------------------KARVV 183
P ++ +A+NS+ L +G+ Q +A +
Sbjct: 339 RRQFPFATLLSIAANSLNLEMGRQIHSQAIVTDAISEVLVGNSLVDMYAKCDKFGEANRI 398
Query: 184 FDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASL 243
F + + W+ +I Y +KG + + LF M + + + + S+L CA+LASL
Sbjct: 399 FADLAHQSSVPWTALISGYVQKGLHEDGLKLFVEMHRAKIGADSATYASILRACANLASL 458
Query: 244 DHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGY 303
G+Q+H++++R +V+ S L+ MY KCG + + +F ++ V WN++IS Y
Sbjct: 459 TLGKQLHSRIIRSGCLSNVFSGSALVDMYAKCGSIKEALQMFQEMPVRNSVSWNALISAY 518
Query: 304 AQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPK 363
AQ G G +L+ F +M SG+ P+ V+ + +L ACS+ G V+EG + F SM Y +EP+
Sbjct: 519 AQNGDGGHALRSFEQMIHSGLQPNSVSFLSILCACSHCGLVEEGLQYFNSMTQVYKLEPR 578
Query: 364 TEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLL 423
EHYA MVD+L R+G+ ++A KL+ MPFEPD I+W S+L +CR H +LA AA +L
Sbjct: 579 REHYASMVDMLCRSGRFDEAEKLMARMPFEPDEIMWSSILNSCRIHKNQELAIKAADQLF 638
Query: 424 QLEP-KNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGR 482
++ ++A PY+ +SNIYA+ G + V +++K +R+R + K P SW+E+++K H+F+
Sbjct: 639 NMKGLRDAAPYVSMSNIYAAAGEWDSVGKVKKALRERGIRKVPAYSWVEIKQKTHVFSAN 698
Query: 483 DCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGL 542
D SHP+ I R L+++ + E GY PDS+ LH+VDEE KV SL+YHSE++A+A+ L
Sbjct: 699 D-TSHPQTKEITRKLDELEKQMEEQGYKPDSTCALHNVDEEVKVESLKYHSERIAIAFAL 757
Query: 543 VKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
+ P+G PI VMKNLR C DCH+AIK+ISK++ REI +RD++RFHHF DG CSC+DYW
Sbjct: 758 ISTPKGSPILVMKNLRACNDCHAAIKVISKIVNREITVRDSSRFHHFTDGSCSCKDYW 815
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 117/456 (25%), Positives = 225/456 (49%), Gaps = 57/456 (12%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MP +NV+S M+ GY++ G ++ A +LF M +++VV+WT+++GG+ + +R +A LF
Sbjct: 68 MPHKNVISTNTMIMGYLKSGNLSTARSLFDSMVQRSVVTWTMLIGGYAQHNRFLEAFNLF 127
Query: 61 ------DMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPK----KNVISWTTMISGYV 110
M+P D + ++ G+ + V+E ++ + K ++ +++ Y
Sbjct: 128 ADMCRHGMVP--DHITLATLLSGFTEFESVNEVAQVHGHVVKVGYDSTLMVCNSLLDSYC 185
Query: 111 NNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAM------PMK----- 159
+ +A LF+ M EK+ V++ A+L GY++ G DA LF M P +
Sbjct: 186 KTRSLGLACHLFKHMAEKDNVTFNALLTGYSKEGFNHDAINLFFKMQDLGFRPSEFTFAA 245
Query: 160 ----------------------------SVVASNSMILGLGQNGEVQKARVVFDQMREKD 191
+V +N+++ ++ + +AR +F +M E D
Sbjct: 246 VLTAGIQMDDIEFGQQVHSFVVKCNFVWNVFVANALLDFYSKHDRIVEARKLFYEMPEVD 305
Query: 192 DATWSGMIKVYERKGYELEVIDLFTLMQKEGV-RVNFPSLISVLSVCASLASLDHGRQVH 250
+++ +I G E ++LF +Q R FP ++LS+ A+ +L+ GRQ+H
Sbjct: 306 GISYNVLITCCAWNGRVEESLELFRELQFTRFDRRQFP-FATLLSIAANSLNLEMGRQIH 364
Query: 251 AQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGE 310
+Q + +V V + L+ MY KC + + IF + A + V W ++ISGY Q GL E
Sbjct: 365 SQAIVTDAISEVLVGNSLVDMYAKCDKFGEANRIFADLAHQSSVPWTALISGYVQKGLHE 424
Query: 311 KSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFES-MKSKYLVEPKTEHYAC 369
LK+F EM + + D T +L AC+ + G+++ ++S L + +
Sbjct: 425 DGLKLFVEMHRAKIGADSATYASILRACANLASLTLGKQLHSRIIRSGCLSNVFSG--SA 482
Query: 370 MVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
+VD+ + G +++A+++ + MP +++ W +L+ A
Sbjct: 483 LVDMYAKCGSIKEALQMFQEMPVR-NSVSWNALISA 517
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 110/471 (23%), Positives = 213/471 (45%), Gaps = 42/471 (8%)
Query: 34 EKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDE 93
+ N + + ++ + AR+LFD MP K+V++ M++GY + G + R +FD
Sbjct: 39 DPNTCRFNFQVQTHLQRGDLGAARKLFDEMPHKNVISTNTMIMGYLKSGNLSTARSLFDS 98
Query: 94 MPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDA 149
M +++V++WT +I GY +NR A LF M + ++ +L G+T+ + +
Sbjct: 99 MVQRSVVTWTMLIGGYAQHNRFLEAFNLFADMCRHGMVPDHITLATLLSGFTEFESVNEV 158
Query: 150 WELF----KAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERK 205
++ K +++ NS++ + + A +F M EKD+ T++ ++ Y ++
Sbjct: 159 AQVHGHVVKVGYDSTLMVCNSLLDSYCKTRSLGLACHLFKHMAEKDNVTFNALLTGYSKE 218
Query: 206 GYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVA 265
G+ + I+LF MQ G R + + +VL+ + ++ G+QVH+ +V+C F +V+VA
Sbjct: 219 GFNHDAINLFFKMQDLGFRPSEFTFAAVLTAGIQMDDIEFGQQVHSFVVKCNFVWNVFVA 278
Query: 266 SVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVM 325
+ L+ Y K +V+ + +F D + +N +I+ A G E+SL++F E+ +
Sbjct: 279 NALLDFYSKHDRIVEARKLFYEMPEVDGISYNVLITCCAWNGRVEESLELFRELQFTRFD 338
Query: 326 PDDVTLVGVLSACSYTGKVKEGREIFES-----MKSKYLVEPKTEHYACMVDLLGRAGQV 380
+LS + + ++ GR+I S+ LV D G A ++
Sbjct: 339 RRQFPFATLLSIAANSLNLEMGRQIHSQAIVTDAISEVLVGNSLVDMYAKCDKFGEANRI 398
Query: 381 -------------------------EDAMKLIEAM---PFEPDAIIWGSLLGACRTHMKL 412
ED +KL M D+ + S+L AC L
Sbjct: 399 FADLAHQSSVPWTALISGYVQKGLHEDGLKLFVEMHRAKIGADSATYASILRACANLASL 458
Query: 413 DLAEVAAKKLLQLEP-KNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVI 462
L + ++++ N L ++YA G + ++ + M RN +
Sbjct: 459 TLGKQLHSRIIRSGCLSNVFSGSALVDMYAKCGSIKEALQMFQEMPVRNSV 509
Score = 39.7 bits (91), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 27/137 (19%), Positives = 57/137 (41%), Gaps = 31/137 (22%)
Query: 245 HGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISG-- 302
H + V A +++ FD + + + +++ G+L + +FD K+++ N++I G
Sbjct: 25 HFQHVDASMIKTGFDPNTCRFNFQVQTHLQRGDLGAARKLFDEMPHKNVISTNTMIMGYL 84
Query: 303 -----------------------------YAQYGLGEKSLKVFHEMFSSGVMPDDVTLVG 333
YAQ+ ++ +F +M G++PD +TL
Sbjct: 85 KSGNLSTARSLFDSMVQRSVVTWTMLIGGYAQHNRFLEAFNLFADMCRHGMVPDHITLAT 144
Query: 334 VLSACSYTGKVKEGREI 350
+LS + V E ++
Sbjct: 145 LLSGFTEFESVNEVAQV 161
>gi|224089505|ref|XP_002308737.1| predicted protein [Populus trichocarpa]
gi|222854713|gb|EEE92260.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 223/564 (39%), Positives = 340/564 (60%), Gaps = 47/564 (8%)
Query: 82 GRVDEGREI----FDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAML 137
+++EG+ I + + +++ T+++ Y + ARKLF+ M ++ V+WTA++
Sbjct: 29 NKLNEGKIIHALLLNSRFRDDLVMQNTLLNLYAKCGDLVYARKLFDEMSSRDVVTWTALI 88
Query: 138 MGYTQCGRIQDAWELFKAM------PMKSVVAS-------------------NSMILGLG 172
GY+Q R QDA L M P + +AS + + L G
Sbjct: 89 TGYSQHDRPQDALLLLPEMLRIGLKPNQFTLASLLKAASGVGSTDVLQGRQLHGLCLRYG 148
Query: 173 QNGEV----------------QKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFT 216
+ V ++A+++FD M K++ +W+ +I Y RKG + LF+
Sbjct: 149 YDSNVYVSCAILDMYARCHHLEEAQLIFDVMVSKNEVSWNALIAGYARKGQGDKAFCLFS 208
Query: 217 LMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCG 276
M +E V+ + SVL CAS+ SL+ G+ VHA +++ + +V + L+ MY K G
Sbjct: 209 NMLRENVKPTHFTYSSVLCACASMGSLEQGKWVHALMIKWGEKLVAFVGNTLLDMYAKSG 268
Query: 277 ELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLS 336
+ K +FD A +D+V WNS+++GY+Q+GLG+ +L+ F EM + + P+D+T + VL+
Sbjct: 269 SIEDAKKVFDRLAKRDVVSWNSMLTGYSQHGLGKVALQRFEEMLRTRIAPNDITFLCVLT 328
Query: 337 ACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDA 396
ACS+ G + EGR F+ MK KY VEP+ HY MVDLLGRAG ++ A++ I MP +P A
Sbjct: 329 ACSHAGLLDEGRHYFDMMK-KYNVEPQISHYVTMVDLLGRAGHLDRAIQFISEMPIKPTA 387
Query: 397 IIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNM 456
+WG+LLGACR H ++L AA+ + +L+ G ++LL NIYA GR++D A++RK M
Sbjct: 388 AVWGALLGACRMHKNMELGGYAAECIFELDSHYPGTHVLLYNIYALAGRWNDAAKVRKMM 447
Query: 457 RKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFV 516
++ V K P CSW+E+E +VH+F D +HP+ I M E+I ++E GY PDSS V
Sbjct: 448 KESGVKKEPACSWVEMENEVHVFVADD-DAHPQRREIHNMWEQISDKIKEIGYVPDSSHV 506
Query: 517 LHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGR 576
L +D++E+ L+YHSEKLA+A+ L+ P G IR+ KN+R+CGDCHSA K +SK++ R
Sbjct: 507 LLCMDQQEREAKLQYHSEKLALAFALLNTPPGSTIRIKKNIRICGDCHSAFKFVSKLVER 566
Query: 577 EIILRDANRFHHFKDGLCSCRDYW 600
EII+RD NRFHHF DG CSC DYW
Sbjct: 567 EIIVRDTNRFHHFCDGACSCEDYW 590
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 95/176 (53%), Gaps = 4/176 (2%)
Query: 232 SVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASK 291
++L C L L+ G+ +HA L+ +F D+ + + L+ +Y KCG+LV + +FD +S+
Sbjct: 20 TLLKRCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNLYAKCGDLVYARKLFDEMSSR 79
Query: 292 DIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGK--VKEGRE 349
D+V W ++I+GY+Q+ + +L + EM G+ P+ TL +L A S G V +GR+
Sbjct: 80 DVVTWTALITGYSQHDRPQDALLLLPEMLRIGLKPNQFTLASLLKAASGVGSTDVLQGRQ 139
Query: 350 IFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
+ + +Y + ++D+ R +E+A + + M + + W +L+
Sbjct: 140 L-HGLCLRYGYDSNVYVSCAILDMYARCHHLEEAQLIFDVM-VSKNEVSWNALIAG 193
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 125/268 (46%), Gaps = 22/268 (8%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM------PEKNVVSWTVMLGGFIRDSRID 54
M R+VV+WTA++ GY + +A L +M P + ++ + + + +
Sbjct: 76 MSSRDVVTWTALITGYSQHDRPQDALLLLPEMLRIGLKPNQFTLASLLKAASGVGSTDVL 135
Query: 55 DARRLFDMM----PEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYV 110
R+L + + +V ++ Y + ++E + IFD M KN +SW +I+GY
Sbjct: 136 QGRQLHGLCLRYGYDSNVYVSCAILDMYARCHHLEEAQLIFDVMVSKNEVSWNALIAGYA 195
Query: 111 NNNRIDVARKLFEVMPEKN----EVSWTAMLMGYTQCGRI-QDAWELFKAMPMK---SVV 162
+ D A LF M +N +++++L G + Q W A+ +K +V
Sbjct: 196 RKGQGDKAFCLFSNMLRENVKPTHFTYSSVLCACASMGSLEQGKW--VHALMIKWGEKLV 253
Query: 163 A--SNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQK 220
A N+++ ++G ++ A+ VFD++ ++D +W+ M+ Y + G + F M +
Sbjct: 254 AFVGNTLLDMYAKSGSIEDAKKVFDRLAKRDVVSWNSMLTGYSQHGLGKVALQRFEEMLR 313
Query: 221 EGVRVNFPSLISVLSVCASLASLDHGRQ 248
+ N + + VL+ C+ LD GR
Sbjct: 314 TRIAPNDITFLCVLTACSHAGLLDEGRH 341
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 108/235 (45%), Gaps = 23/235 (9%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV----VSWTVMLGGFIRDSRIDDA 56
M +N VSW A++ GY +G +A LF M +NV +++ +L ++
Sbjct: 179 MVSKNEVSWNALIAGYARKGQGDKAFCLFSNMLRENVKPTHFTYSSVLCACASMGSLEQG 238
Query: 57 RRLFDMM---PEKDVVAQTNMVLG-YCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+ + +M EK V N +L Y + G +++ +++FD + K++V+SW +M++GY +
Sbjct: 239 KWVHALMIKWGEKLVAFVGNTLLDMYAKSGSIEDAKKVFDRLAKRDVVSWNSMLTGYSQH 298
Query: 113 NRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNS-- 166
VA + FE M N++++ +L + G + + F M +V S
Sbjct: 299 GLGKVALQRFEEMLRTRIAPNDITFLCVLTACSHAGLLDEGRHYFDMMKKYNVEPQISHY 358
Query: 167 --MILGLGQNGEVQKARVVFDQMREKDDAT-WSGMI------KVYERKGYELEVI 212
M+ LG+ G + +A +M K A W ++ K E GY E I
Sbjct: 359 VTMVDLLGRAGHLDRAIQFISEMPIKPTAAVWGALLGACRMHKNMELGGYAAECI 413
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 131/287 (45%), Gaps = 25/287 (8%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDM 62
+ NV A++ Y + EA +F M KN VSW ++ G+ R + D A LF
Sbjct: 150 DSNVYVSCAILDMYARCHHLEEAQLIFDVMVSKNEVSWNALIAGYARKGQGDKAFCLFSN 209
Query: 63 MPEKDVVAQT---NMVLGYCQD-GRVDEGREIFDEMPK--KNVISW--TTMISGYVNNNR 114
M ++V + VL C G +++G+ + M K + ++++ T++ Y +
Sbjct: 210 MLRENVKPTHFTYSSVLCACASMGSLEQGKWVHALMIKWGEKLVAFVGNTLLDMYAKSGS 269
Query: 115 IDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSM-----IL 169
I+ A+K+F+ + +++ VSW +ML GY+Q G + A + F+ M +++ +A N + +
Sbjct: 270 IEDAKKVFDRLAKRDVVSWNSMLTGYSQHGLGKVALQRFEEM-LRTRIAPNDITFLCVLT 328
Query: 170 GLGQNGEVQKARVVFDQMR----EKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRV 225
G + + R FD M+ E + + M+ + R G+ I + M +
Sbjct: 329 ACSHAGLLDEGRHYFDMMKKYNVEPQISHYVTMVDLLGRAGHLDRAIQFISEMPIKPTAA 388
Query: 226 NFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMY 272
+ +L L C +++ G C F++D + + +Y
Sbjct: 389 VWGAL---LGACRMHKNMELG----GYAAECIFELDSHYPGTHVLLY 428
>gi|328774761|gb|AEB39780.1| pentatricopeptide repeat protein 45 [Funaria hygrometrica]
Length = 1097
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 256/720 (35%), Positives = 363/720 (50%), Gaps = 123/720 (17%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEK----NVVSWTVML------------ 44
M ER++ SWT M+ G + G EA +LF QM N+ ++ +L
Sbjct: 381 MTERDIFSWTVMIGGLAQHGRGQEAFSLFLQMQRNGCLPNLTTYLSILNASAIASTSALE 440
Query: 45 -----------GGFIRDSRI--------------DDARRLFDMMPEKDVVAQTNMVLGYC 79
GFI D RI DDAR +FD M ++DV++ M+ G
Sbjct: 441 WVKVVHKHAEEAGFISDLRIGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMMGGLA 500
Query: 80 QDGRVDEGREIFDEMPKKNVISWTT----------------------------------- 104
Q+G E +F +M ++ ++ +T
Sbjct: 501 QNGCGHEAFTVFLQMQQEGLVPDSTTYLSLLNTHGSTDALEWVNEVHKHAVETGLISDFR 560
Query: 105 ----MISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQ--CGRIQDAWELFKAMPM 158
I Y+ ID AR LF+ + ++ +W AM+ G Q CGR +A LF M
Sbjct: 561 VGSAFIHMYIRCGSIDDARLLFDKLSVRHVTTWNAMIGGAAQQRCGR--EALSLFLQMQR 618
Query: 159 KSVV--------------------------------------ASNSMILGLGQNGEVQKA 180
+ + N+++ + G V+ A
Sbjct: 619 EGFIPDATTFINILSANVDEEALEWVKEVHSHATDAGLVDLRVGNALVHTYSKCGNVKYA 678
Query: 181 RVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASL 240
+ VFD M E++ TW+ MI + G + F M +EG+ + + +S+LS CAS
Sbjct: 679 KQVFDDMVERNVTTWTMMIGGLAQHGCGHDAFSHFLQMLREGIVPDATTYVSILSACAST 738
Query: 241 ASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSII 300
+L+ ++VH V D+ V + L+ MY KCG + + +FD+ +D+ W +I
Sbjct: 739 GALEWVKEVHNHAVSAGLVSDLRVGNALVHMYAKCGSIDDARSVFDDMVERDVFSWTVMI 798
Query: 301 SGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLV 360
G AQ+G G ++L F +M S G P+ + V VL+ACS+ G V EGR F SM Y +
Sbjct: 799 GGLAQHGRGLEALDFFVKMKSEGFKPNGYSYVAVLTACSHAGLVDEGRRQFLSMTQDYGI 858
Query: 361 EPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAK 420
EP EHY CMVDLLGRAG +E+A I MP EPD WG+LLGAC T+ L++AE AAK
Sbjct: 859 EPTMEHYTCMVDLLGRAGLLEEAELFILNMPIEPDDAPWGALLGACVTYGNLEMAEFAAK 918
Query: 421 KLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFT 480
+ L+L+PK+A Y+LLSNIYA+ G++ +R M+++ + K PG SWIEV+ ++H F
Sbjct: 919 ERLKLKPKSASTYVLLSNIYAATGKWEQKLLVRSMMQRKGIRKEPGRSWIEVDNRIHSFV 978
Query: 481 GRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAY 540
D SHPE I L + L+ GY PD+ VL + D+E K +L HSEKLA+ Y
Sbjct: 979 VGD-TSHPESKEIYAQLNDLIERLKAKGYVPDTRLVLRNTDQEHKEQALCSHSEKLAIVY 1037
Query: 541 GLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
GL+ PIRV KNLRVC DCH+A K ISK+ GREI+ RDA RFHHFKDG+CSC DYW
Sbjct: 1038 GLMHTQSKDPIRVYKNLRVCSDCHTATKFISKITGREIVARDAKRFHHFKDGVCSCGDYW 1097
Score = 171 bits (434), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 120/456 (26%), Positives = 208/456 (45%), Gaps = 59/456 (12%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDM 62
E+N+ ++R Y+ G + A +F ++ +KN+ WT M+GG+ +DA R++D
Sbjct: 150 EQNLYVANKLLRVYIRCGRLQCARQVFDKLLKKNIYIWTTMIGGYAEYGHAEDAMRVYDK 209
Query: 63 MPEK---------------------------------------DVVAQTNMVLGYCQDGR 83
M ++ DV +T +V Y + G
Sbjct: 210 MRQECGQPNEITYLSILKACCCPVNLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGS 269
Query: 84 VDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEK----NEVSWTAMLMG 139
+++ + IFD+M ++NVISWT MI G + R A LF M + N ++ ++L
Sbjct: 270 IEDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHLFLQMQREGFIPNSYTYVSILNA 329
Query: 140 YTQCGRIQDAWELFKAMPMKSVVA--------SNSMILGLGQNGEVQKARVVFDQMREKD 191
G A E K + +V A N+++ ++G + ARVVFD M E+D
Sbjct: 330 NASAG----ALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMTERD 385
Query: 192 DATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVL--SVCASLASLDHGRQV 249
+W+ MI + G E LF MQ+ G N + +S+L S AS ++L+ + V
Sbjct: 386 IFSWTVMIGGLAQHGRGQEAFSLFLQMQRNGCLPNLTTYLSILNASAIASTSALEWVKVV 445
Query: 250 HAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLG 309
H F D+ + + LI MY KCG + +L+FD +D++ WN+++ G AQ G G
Sbjct: 446 HKHAEEAGFISDLRIGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMMGGLAQNGCG 505
Query: 310 EKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYAC 369
++ VF +M G++PD T + +L+ T ++ E+ + L+ A
Sbjct: 506 HEAFTVFLQMQQEGLVPDSTTYLSLLNTHGSTDALEWVNEVHKHAVETGLISDFRVGSA- 564
Query: 370 MVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
+ + R G ++DA L + + W +++G
Sbjct: 565 FIHMYIRCGSIDDARLLFDKLSVR-HVTTWNAMIGG 599
Score = 171 bits (433), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 143/545 (26%), Positives = 227/545 (41%), Gaps = 102/545 (18%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVV 69
TA+V YV+ G I +A +F +M E+NV+SWTVM+GG R +A LF M + +
Sbjct: 258 TALVNMYVKCGSIEDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHLFLQMQREGFI 317
Query: 70 AQTNMVLGYCQDGRVDEGREIFDEMPKKNVISW--------TTMISGYVNNNRIDVARKL 121
+ + E E+ V + ++ Y + ID AR +
Sbjct: 318 PNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVV 377
Query: 122 FEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMK---------------SVVAS-- 164
F+ M E++ SWT M+ G Q GR Q+A+ LF M S +AS
Sbjct: 378 FDGMTERDIFSWTVMIGGLAQHGRGQEAFSLFLQMQRNGCLPNLTTYLSILNASAIASTS 437
Query: 165 ------------------------NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIK 200
N++I + G + AR+VFD M ++D +W+ M+
Sbjct: 438 ALEWVKVVHKHAEEAGFISDLRIGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMMG 497
Query: 201 VYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDV 260
+ G E +F MQ+EG+ + + +S+L+ S +L+ +VH V
Sbjct: 498 GLAQNGCGHEAFTVFLQMQQEGLVPDSTTYLSLLNTHGSTDALEWVNEVHKHAVETGLIS 557
Query: 261 DVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMF 320
D V S I MYI+CG + +L+FD + + + WN++I G AQ G ++L +F +M
Sbjct: 558 DFRVGSAFIHMYIRCGSIDDARLLFDKLSVRHVTTWNAMIGGAAQQRCGREALSLFLQMQ 617
Query: 321 SSGVMPDDVTLVGVLSA----------------------------------CSYTGKVKE 346
G +PD T + +LSA S G VK
Sbjct: 618 REGFIPDATTFINILSANVDEEALEWVKEVHSHATDAGLVDLRVGNALVHTYSKCGNVKY 677
Query: 347 GREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFE---PDAIIWGSLL 403
+++F+ M VE + M+ L + G DA M E PDA + S+L
Sbjct: 678 AKQVFDDM-----VERNVTTWTMMIGGLAQHGCGHDAFSHFLQMLREGIVPDATTYVSIL 732
Query: 404 GACRTHMKLDLAE------VAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMR 457
AC + L+ + V+A + L NA L ++YA G D + +M
Sbjct: 733 SACASTGALEWVKEVHNHAVSAGLVSDLRVGNA-----LVHMYAKCGSIDDARSVFDDMV 787
Query: 458 KRNVI 462
+R+V
Sbjct: 788 ERDVF 792
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 99/414 (23%), Positives = 202/414 (48%), Gaps = 23/414 (5%)
Query: 65 EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEV 124
E+++ ++ Y + GR+ R++FD++ KKN+ WTTMI GY + A ++++
Sbjct: 150 EQNLYVANKLLRVYIRCGRLQCARQVFDKLLKKNIYIWTTMIGGYAEYGHAEDAMRVYDK 209
Query: 125 MPEK----NEVSWTAMLMGYTQCGRIQDAW------ELFKAMPMKSVVASNSMILGLGQN 174
M ++ NE+++ ++L C + W + ++ V +++ +
Sbjct: 210 MRQECGQPNEITYLSILKAC--CCPVNLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKC 267
Query: 175 GEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVL 234
G ++ A+++FD+M E++ +W+ MI G E LF MQ+EG N + +S+L
Sbjct: 268 GSIEDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHLFLQMQREGFIPNSYTYVSIL 327
Query: 235 SVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIV 294
+ AS +L+ ++VH+ V +D+ V + L+ MY K G + +++FD +DI
Sbjct: 328 NANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMTERDIF 387
Query: 295 MWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVL--SACSYTGKVKEGREIFE 352
W +I G AQ+G G+++ +F +M +G +P+ T + +L SA + T ++ + + +
Sbjct: 388 SWTVMIGGLAQHGRGQEAFSLFLQMQRNGCLPNLTTYLSILNASAIASTSALEWVKVVHK 447
Query: 353 SMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKL 412
+ + A ++ + + G ++DA + + M + D I W +++G +
Sbjct: 448 HAEEAGFISDLRIGNA-LIHMYAKCGSIDDARLVFDGMC-DRDVISWNAMMGGLAQN--- 502
Query: 413 DLAEVAAKKLLQLEPKNAGP----YILLSNIYASQGRFHDVAELRKNMRKRNVI 462
A LQ++ + P Y+ L N + S V E+ K+ + +I
Sbjct: 503 GCGHEAFTVFLQMQQEGLVPDSTTYLSLLNTHGSTDALEWVNEVHKHAVETGLI 556
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 131/251 (52%), Gaps = 11/251 (4%)
Query: 210 EVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLI 269
+ + + + ++G+ ++ S +++L C + +QVH +++ + ++YVA+ L+
Sbjct: 101 DAVAMLKIRVQQGIAIDSFSYVNILQRCLKQEDILLAKQVHVCIIKSGMEQNLYVANKLL 160
Query: 270 TMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDV 329
+YI+CG L + +FD K+I +W ++I GYA+YG E +++V+ +M P+++
Sbjct: 161 RVYIRCGRLQCARQVFDKLLKKNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQECGQPNEI 220
Query: 330 TLVGVLSACSYTGKVKEGREIFES-MKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIE 388
T + +L AC +K G++I ++S + + + E +V++ + G +EDA + +
Sbjct: 221 TYLSILKACCCPVNLKWGKKIHAHIIQSGFQSDVRVE--TALVNMYVKCGSIEDAQLIFD 278
Query: 389 AMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPK----NAGPYILLSNIYASQG 444
M E + I W ++G + + + A LQ++ + N+ Y+ + N AS G
Sbjct: 279 KM-VERNVISWTVMIGGLAHYGR---GQEAFHLFLQMQREGFIPNSYTYVSILNANASAG 334
Query: 445 RFHDVAELRKN 455
V E+ +
Sbjct: 335 ALEWVKEVHSH 345
>gi|347954542|gb|AEP33771.1| organelle transcript processing 82, partial [Thlaspi arvense]
Length = 673
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 239/647 (36%), Positives = 373/647 (57%), Gaps = 50/647 (7%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPE----KNVVSWTVMLGGFIRDSRIDDARR 58
E N + W M+RGY A L+ M N ++ +L + ++ ++
Sbjct: 28 EPNQLIWNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFLLKSCAKSKAFEEGQQ 87
Query: 59 L----FDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNR 114
+ + E D+ T+++ Y Q+GR+++ ++FD ++V+S+T +I+GY ++
Sbjct: 88 IHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDVVSYTALITGYASSGN 147
Query: 115 IDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAM--------------PMKS 160
I A+++F+ +P K+ VSW AM+ GY + G ++A ELFK M + +
Sbjct: 148 IRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTNVRPDEGTMVTVLSA 207
Query: 161 VVASNSMILG-----------LGQN--------------GEVQKARVVFDQMREKDDATW 195
S S+ LG G N G+V+ A +F+ + KD +W
Sbjct: 208 CAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVETACGLFEGLSCKDVVSW 267
Query: 196 SGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVR 255
+ +I Y E + LF M + G N +++S+L CA L ++D GR +H + +
Sbjct: 268 NTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPACAHLGAIDIGRWIHVYIDK 327
Query: 256 CQFDVD--VYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSL 313
DV + + LI MY KCG++ +F++ K + WN++I G+A +G
Sbjct: 328 KLKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAMHGRANAGF 387
Query: 314 KVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDL 373
+F M +G+ PDD+T VG+LSACS++GK+ GR IF+SM Y + PK EHY CM+DL
Sbjct: 388 DLFSRMRKNGIEPDDITFVGLLSACSHSGKLDLGRHIFKSMTQDYDITPKLEHYGCMIDL 447
Query: 374 LGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPY 433
LG +G ++A ++I+ MP EPD +IW SLL ACR H L+LAE A+ L+++EP+N G Y
Sbjct: 448 LGHSGLFKEAKEMIKTMPMEPDGVIWCSLLKACRRHGNLELAESFARNLMKVEPENPGSY 507
Query: 434 ILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMI 493
+LLSNIYA+ G + +VA++R + + + K PGCS IE++ +VH F D + HP + I
Sbjct: 508 VLLSNIYATAGEWDEVAKVRALLNGKGMKKVPGCSSIEIDSEVHEFIVGDKL-HPRNREI 566
Query: 494 MRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRV 553
MLE++ LL EAG+ PD+S VL +++EE K +LR+HSEKLA+A+GL+ G + +
Sbjct: 567 YGMLEEMEALLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTI 626
Query: 554 MKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
+KNLRVC +CH A KL+SK+ REII RD RFHHF+DG+CSC D+W
Sbjct: 627 VKNLRVCRNCHEATKLVSKIYKREIIARDRTRFHHFRDGVCSCNDFW 673
Score = 118 bits (296), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 130/261 (49%), Gaps = 34/261 (13%)
Query: 183 VFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLAS 242
VF ++E + W+ M++ Y + + L+ +M G+ N + +L CA +
Sbjct: 22 VFATIQEPNQLIWNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFLLKSCAKSKA 81
Query: 243 LDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFD---------------N 287
+ G+Q+H +++ ++ D+YV + LI+MY + G L +FD
Sbjct: 82 FEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDVVSYTALITG 141
Query: 288 FAS----------------KDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTL 331
+AS KD+V WN++ISGYA+ G +++L++F EM + V PD+ T+
Sbjct: 142 YASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTNVRPDEGTM 201
Query: 332 VGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMP 391
V VLSAC+ + V+ GR++ S + + ++DL + GQVE A L E +
Sbjct: 202 VTVLSACAQSRSVELGRQV-HSWIDDHGFGSNLKIVNALIDLYSKCGQVETACGLFEGLS 260
Query: 392 FEPDAIIWGSLLGACRTHMKL 412
+ D + W +L+G THM L
Sbjct: 261 CK-DVVSWNTLIGG-YTHMNL 279
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 131/278 (47%), Gaps = 19/278 (6%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVV----SWTVMLGGFIRDSRIDDA 56
+P ++VVSW AM+ GY E G EA LF +M + NV + +L + ++
Sbjct: 158 IPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTNVRPDEGTMVTVLSACAQSRSVELG 217
Query: 57 RRLFDMMPEKDVVAQTNMVLG----YCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
R++ + + + +V Y + G+V+ +F+ + K+V+SW T+I GY +
Sbjct: 218 RQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVETACGLFEGLSCKDVVSWNTLIGGYTHM 277
Query: 113 NRIDVARKLFEVM----PEKNEVSWTAMLMGYTQCGRIQ-DAW-ELFKAMPMKSVVASNS 166
N A LF+ M N+V+ ++L G I W ++ +K V + S
Sbjct: 278 NLYKEALLLFQEMLRSGESPNDVTIVSILPACAHLGAIDIGRWIHVYIDKKLKDVTNAPS 337
Query: 167 MILGL----GQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEG 222
+ L + G+++ A VF+ M K ++W+ MI + G DLF+ M+K G
Sbjct: 338 LRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAMHGRANAGFDLFSRMRKNG 397
Query: 223 VRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDV 260
+ + + + +LS C+ LD GR + + + +D+
Sbjct: 398 IEPDDITFVGLLSACSHSGKLDLGRHIFKSMTQ-DYDI 434
>gi|168068035|ref|XP_001785902.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662428|gb|EDQ49285.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 908
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 238/615 (38%), Positives = 342/615 (55%), Gaps = 16/615 (2%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVV----SWTVMLGGFIRDSRIDDA 56
M +R+V+SW AM+ G + G EA T+F +M ++ V ++ +L + +
Sbjct: 295 MCDRDVISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWEWV 354
Query: 57 RRLFDMMPE----KDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+ + E D+ + V Y + G +D+ + IFD++ +NV +W MI G
Sbjct: 355 KEVHKHAVEVGLVSDLRVGSAFVHMYIRCGSIDDAQLIFDKLAVRNVTTWNAMIGGVAQQ 414
Query: 113 NRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVAS-------N 165
A LF M + + ++A E K + ++ A N
Sbjct: 415 KCGREALSLFLQMRREGFFPDATTFVNILSANVGEEALEWVKEVHSYAIDAGLVDLRVGN 474
Query: 166 SMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRV 225
+++ + G A+ VFD M E++ TW+ MI + G E LF M +EG+
Sbjct: 475 ALVHMYAKCGNTMYAKQVFDDMVERNVTTWTVMISGLAQHGCGHEAFSLFLQMLREGIVP 534
Query: 226 NFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIF 285
+ + +S+LS CAS +L+ ++VH+ V D+ V + L+ MY KCG + + +F
Sbjct: 535 DATTYVSILSACASTGALEWVKEVHSHAVNAGLVSDLRVGNALVHMYAKCGSVDDARRVF 594
Query: 286 DNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVK 345
D+ +D+ W +I G AQ+G G +L +F +M G P+ + V VLSACS+ G V
Sbjct: 595 DDMLERDVYSWTVMIGGLAQHGRGLDALDLFVKMKLEGFKPNGYSFVAVLSACSHAGLVD 654
Query: 346 EGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
EGR F S+ Y +EP EHY CMVDLLGRAGQ+E+A I MP EP WG+LLGA
Sbjct: 655 EGRRQFLSLTQDYGIEPTMEHYTCMVDLLGRAGQLEEAKHFILNMPIEPGDAPWGALLGA 714
Query: 406 CRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPP 465
C T+ L++AE AAK+ L+L+PK+A Y+LLSNIYA+ G + +R M++R + K P
Sbjct: 715 CVTYGNLEMAEFAAKERLKLKPKSASTYVLLSNIYAATGNWEQKLLVRSMMQRRGIRKEP 774
Query: 466 GCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEK 525
G SWIEV+ ++H F D SHPE I L+ + L+ GY PD+ VL + D+E K
Sbjct: 775 GRSWIEVDNQIHSFVVGD-TSHPESKEIYAKLKDLIKRLKAEGYVPDTRLVLRNTDQEYK 833
Query: 526 VHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANR 585
+L HSEKLA+ YGL+ P PIRV KNLRVC DCH+A K ISKV GREI+ RDA R
Sbjct: 834 EQALCSHSEKLAIVYGLMHTPYRNPIRVYKNLRVCSDCHTATKFISKVTGREIVARDAKR 893
Query: 586 FHHFKDGLCSCRDYW 600
FHHFKDG+CSC DYW
Sbjct: 894 FHHFKDGVCSCGDYW 908
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 143/544 (26%), Positives = 228/544 (41%), Gaps = 102/544 (18%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDA-RRLFDMMPEK-- 66
TA+V YV+ G I +A +F +M E+NV+SWTVM+GG R +A R M E
Sbjct: 69 TALVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRFLQMQREGFI 128
Query: 67 ------------------------------------DVVAQTNMVLGYCQDGRVDEGREI 90
D+ +V Y + G +D+ R +
Sbjct: 129 PNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVV 188
Query: 91 FDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPE----KNEVSWTAML--MGYTQCG 144
FD M ++++ SWT MI G + R A LF M N ++ ++L T G
Sbjct: 189 FDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSILNASAITSTG 248
Query: 145 RIQDAWELFKAMPMKSVVA----SNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIK 200
++ E+ K ++ N++I + G + AR+VFD M ++D +W+ MI
Sbjct: 249 ALEWVKEVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMIG 308
Query: 201 VYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDV 260
+ G E +F MQ+EG + + +S+L+ S + + ++VH V
Sbjct: 309 GLAQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWEWVKEVHKHAVEVGLVS 368
Query: 261 DVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMF 320
D+ V S + MYI+CG + +LIFD A +++ WN++I G AQ G ++L +F +M
Sbjct: 369 DLRVGSAFVHMYIRCGSIDDAQLIFDKLAVRNVTTWNAMIGGVAQQKCGREALSLFLQMR 428
Query: 321 SSGVMPDDVTLVGVLSAC-------------SYT---------------------GKVKE 346
G PD T V +LSA SY G
Sbjct: 429 REGFFPDATTFVNILSANVGEEALEWVKEVHSYAIDAGLVDLRVGNALVHMYAKCGNTMY 488
Query: 347 GREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFE---PDAIIWGSLL 403
+++F+ M VE + M+ L + G +A L M E PDA + S+L
Sbjct: 489 AKQVFDDM-----VERNVTTWTVMISGLAQHGCGHEAFSLFLQMLREGIVPDATTYVSIL 543
Query: 404 GACRTHMKLDLAE------VAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMR 457
AC + L+ + V A + L NA L ++YA G D + +M
Sbjct: 544 SACASTGALEWVKEVHSHAVNAGLVSDLRVGNA-----LVHMYAKCGSVDDARRVFDDML 598
Query: 458 KRNV 461
+R+V
Sbjct: 599 ERDV 602
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 112/416 (26%), Positives = 197/416 (47%), Gaps = 28/416 (6%)
Query: 12 MVRGYVEEGMITEAGTLFWQM----PEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEK- 66
M+ GY E G +A ++ QM + N +++ +L + +++ + +
Sbjct: 1 MIGGYAEYGYAEDAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSG 60
Query: 67 ---DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFE 123
DV +T +V Y + G +D+ + IFD+M ++NVISWT MI G + R A F
Sbjct: 61 FQSDVRVETALVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRFL 120
Query: 124 VMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVA--------SNSMILGL 171
M + N ++ ++L G A E K + +V A N+++
Sbjct: 121 QMQREGFIPNSYTYVSILNANASAG----ALEWVKEVHSHAVNAGLALDLRVGNALVHMY 176
Query: 172 GQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLI 231
++G + ARVVFD M E+D +W+ MI + G E LF M++ G N + +
Sbjct: 177 AKSGSIDDARVVFDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYL 236
Query: 232 SVLSVCA--SLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFA 289
S+L+ A S +L+ ++VH + F D+ V + LI MY KCG + +L+FD
Sbjct: 237 SILNASAITSTGALEWVKEVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGMC 296
Query: 290 SKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGRE 349
+D++ WN++I G AQ G G ++ +F +M G +PD T + +L+ TG + +E
Sbjct: 297 DRDVISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWEWVKE 356
Query: 350 IFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
+ + LV A V + R G ++DA + + + + W +++G
Sbjct: 357 VHKHAVEVGLVSDLRVGSA-FVHMYIRCGSIDDAQLIFDKLAVR-NVTTWNAMIGG 410
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/368 (23%), Positives = 178/368 (48%), Gaps = 25/368 (6%)
Query: 105 MISGYVNNNRIDVARKLFEVM----PEKNEVSWTAMLMGYTQCGRIQDAW------ELFK 154
MI GY + A K++ M + NE+++ ++L C + W + +
Sbjct: 1 MIGGYAEYGYAEDAMKVYSQMRREGGQPNEITYLSILKAC--CSPVSLKWGKKIHAHIIQ 58
Query: 155 AMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDL 214
+ V +++ + G + A+++FD+M E++ +W+ MI G E
Sbjct: 59 SGFQSDVRVETALVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHR 118
Query: 215 FTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIK 274
F MQ+EG N + +S+L+ AS +L+ ++VH+ V +D+ V + L+ MY K
Sbjct: 119 FLQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAK 178
Query: 275 CGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGV 334
G + +++FD +DI W +I G AQ+G G+++ +F +M G +P+ T + +
Sbjct: 179 SGSIDDARVVFDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSI 238
Query: 335 L--SACSYTGKVKEGREIFE-SMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMP 391
L SA + TG ++ +E+ + + K+ ++ + + + ++ + + G ++DA + + M
Sbjct: 239 LNASAITSTGALEWVKEVHKHAGKAGFISDLRVGN--ALIHMYAKCGSIDDARLVFDGMC 296
Query: 392 FEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGP----YILLSNIYASQGRFH 447
+ D I W +++G + A L+++ + P Y+ L N + S G +
Sbjct: 297 -DRDVISWNAMIGGLAQN---GCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWE 352
Query: 448 DVAELRKN 455
V E+ K+
Sbjct: 353 WVKEVHKH 360
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 137/272 (50%), Gaps = 13/272 (4%)
Query: 198 MIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQ 257
MI Y GY + + +++ M++EG + N + +S+L C S SL G+++HA +++
Sbjct: 1 MIGGYAEYGYAEDAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSG 60
Query: 258 FDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFH 317
F DV V + L+ MY+KCG + +LIFD ++++ W +I G A YG G+++ F
Sbjct: 61 FQSDVRVETALVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRFL 120
Query: 318 EMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIF-ESMKSKYLVEPKTEHYACMVDLLGR 376
+M G +P+ T V +L+A + G ++ +E+ ++ + ++ + + +V + +
Sbjct: 121 QMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGN--ALVHMYAK 178
Query: 377 AGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGP---- 432
+G ++DA + + M E D W ++G H + + A LQ+E P
Sbjct: 179 SGSIDDARVVFDGM-VERDIFSWTVMIGGLAQHGR---GQEAFSLFLQMERGGCLPNLTT 234
Query: 433 --YILLSNIYASQGRFHDVAELRKNMRKRNVI 462
IL ++ S G V E+ K+ K I
Sbjct: 235 YLSILNASAITSTGALEWVKEVHKHAGKAGFI 266
>gi|225428334|ref|XP_002279974.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial [Vitis vinifera]
Length = 623
Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust.
Identities = 220/534 (41%), Positives = 333/534 (62%), Gaps = 21/534 (3%)
Query: 78 YCQDGRVDEGREIFDEMPKKNVISWTTMISGY---VNNNRIDVARKLFEVMPEKNEVSWT 134
Y + ++E ++FDEMP++NV+SWTTMIS Y +N+ + +F N +++
Sbjct: 100 YVKFNLLEEAEDLFDEMPERNVVSWTTMISAYSNKLNDKALKCLILMFREGVRPNMFTYS 159
Query: 135 AML--------MGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQ 186
++L + CG I+ E V +++I + ++ A VFD+
Sbjct: 160 SVLRACDGLPNLRQLHCGIIKTGLE-------SDVFVRSALIDVYSKWSDLDNALGVFDE 212
Query: 187 MREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHG 246
M +D W+ +I + + E ++LF M++ G + +L SVL C LA L+ G
Sbjct: 213 MPTRDLVVWNSIIGGFAQNSDGNEALNLFKRMKRAGFLADQATLTSVLRACTGLALLELG 272
Query: 247 RQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQY 306
RQVH +++ FD D+ + + LI MY KCG L F KD++ W+++++G AQ
Sbjct: 273 RQVHVHVLK--FDQDLILNNALIDMYCKCGSLEDANSAFSRMVEKDVISWSTMVAGLAQN 330
Query: 307 GLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEH 366
G ++L++F M SG P+ +T++GVL ACS+ G V++G F SMK + V+P EH
Sbjct: 331 GYSRQALELFESMKESGSRPNYITVLGVLFACSHAGLVEKGWYYFRSMKKLFGVDPGREH 390
Query: 367 YACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLE 426
Y C++DLLGRAG++++A+KLI M EPD++ W +LLGACR H +DLA AAKK+++LE
Sbjct: 391 YGCLIDLLGRAGRLDEAVKLIHEMECEPDSVTWRTLLGACRVHRNVDLAIYAAKKIIELE 450
Query: 427 PKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVS 486
P++AG YILLSNIYA+ R+ DVAE+RK M R + K PGCSWIEV+K++H+F D S
Sbjct: 451 PEDAGTYILLSNIYANTQRWEDVAEVRKTMTNRGIRKTPGCSWIEVDKQIHVFILGD-TS 509
Query: 487 HPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLP 546
HP+ I++ L + + GY PD++FVL D++ E+K SLRYHSEKLA+ +GL+ L
Sbjct: 510 HPKIEEIVQRLNDLIERVMGVGYVPDTNFVLQDLEGEQKEDSLRYHSEKLAIMFGLMNLS 569
Query: 547 EGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
+R+ KNLR+CGDCH K++S++ R I++RD R+HHF+DG+CSC DYW
Sbjct: 570 REKTVRIRKNLRICGDCHVFAKVVSRMEHRSIVIRDPIRYHHFQDGVCSCGDYW 623
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/339 (23%), Positives = 152/339 (44%), Gaps = 49/339 (14%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDAR------------ 57
++ YV+ ++ EA LF +MPE+NVVSWT M+ + ++++D
Sbjct: 94 NTLLNMYVKFNLLEEAEDLFDEMPERNVVSWTTMISAY--SNKLNDKALKCLILMFREGV 151
Query: 58 -----------RLFDMMP--------------EKDVVAQTNMVLGYCQDGRVDEGREIFD 92
R D +P E DV ++ ++ Y + +D +FD
Sbjct: 152 RPNMFTYSSVLRACDGLPNLRQLHCGIIKTGLESDVFVRSALIDVYSKWSDLDNALGVFD 211
Query: 93 EMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWEL 152
EMP ++++ W ++I G+ N+ + A LF+ M ++ A L + EL
Sbjct: 212 EMPTRDLVVWNSIIGGFAQNSDGNEALNLFKRMKRAGFLADQATLTSVLRACTGLALLEL 271
Query: 153 FKAMPM------KSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKG 206
+ + + + ++ +N++I + G ++ A F +M EKD +WS M+ + G
Sbjct: 272 GRQVHVHVLKFDQDLILNNALIDMYCKCGSLEDANSAFSRMVEKDVISWSTMVAGLAQNG 331
Query: 207 YELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVA- 265
Y + ++LF M++ G R N+ +++ VL C+ ++ G + + ++ F VD
Sbjct: 332 YSRQALELFESMKESGSRPNYITVLGVLFACSHAGLVEKG-WYYFRSMKKLFGVDPGREH 390
Query: 266 -SVLITMYIKCGELVKG-KLIFDNFASKDIVMWNSIISG 302
LI + + G L + KLI + D V W +++
Sbjct: 391 YGCLIDLLGRAGRLDEAVKLIHEMECEPDSVTWRTLLGA 429
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 98/196 (50%), Gaps = 22/196 (11%)
Query: 218 MQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGE 277
M++ GV + + ++ C++ ++ G++VH + ++ ++V + L+ MY+K
Sbjct: 46 MERHGVFADAITYSELIKCCSARGAVQEGKRVHEHIFCKGYEPKMFVVNTLLNMYVKFNL 105
Query: 278 LVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSA 337
L + + +FD +++V W ++IS Y+ L +K+LK MF GV P+ T VL A
Sbjct: 106 LEEAEDLFDEMPERNVVSWTTMISAYSN-KLNDKALKCLILMFREGVRPNMFTYSSVLRA 164
Query: 338 CS--------YTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEA 389
C + G +K G ++S V + ++D+ + +++A+ + +
Sbjct: 165 CDGLPNLRQLHCGIIKTG------LESDVFVR------SALIDVYSKWSDLDNALGVFDE 212
Query: 390 MPFEPDAIIWGSLLGA 405
MP D ++W S++G
Sbjct: 213 MPTR-DLVVWNSIIGG 227
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 104/244 (42%), Gaps = 47/244 (19%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDM 62
E +V +A++ Y + + A +F +MP +++V W ++GGF ++S ++A LF
Sbjct: 184 ESDVFVRSALIDVYSKWSDLDNALGVFDEMPTRDLVVWNSIIGGFAQNSDGNEALNLFKR 243
Query: 63 MP-------------------------------------EKDVVAQTNMVLGYCQDGRVD 85
M ++D++ ++ YC+ G ++
Sbjct: 244 MKRAGFLADQATLTSVLRACTGLALLELGRQVHVHVLKFDQDLILNNALIDMYCKCGSLE 303
Query: 86 EGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEK----NEVSWTAMLMGYT 141
+ F M +K+VISW+TM++G N A +LFE M E N ++ +L +
Sbjct: 304 DANSAFSRMVEKDVISWSTMVAGLAQNGYSRQALELFESMKESGSRPNYITVLGVLFACS 363
Query: 142 QCGRIQDAWELFKAMPMKSVVASNSMILG-----LGQNGEVQKARVVFDQMR-EKDDATW 195
G ++ W F++M V G LG+ G + +A + +M E D TW
Sbjct: 364 HAGLVEKGWYYFRSMKKLFGVDPGREHYGCLIDLLGRAGRLDEAVKLIHEMECEPDSVTW 423
Query: 196 SGMI 199
++
Sbjct: 424 RTLL 427
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 48/95 (50%), Gaps = 2/95 (2%)
Query: 311 KSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACM 370
++++ M GV D +T ++ CS G V+EG+ + E + K EPK +
Sbjct: 38 RAMRAMDAMERHGVFADAITYSELIKCCSARGAVQEGKRVHEHIFCKGY-EPKMFVVNTL 96
Query: 371 VDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
+++ + +E+A L + MP E + + W +++ A
Sbjct: 97 LNMYVKFNLLEEAEDLFDEMP-ERNVVSWTTMISA 130
>gi|357521583|ref|XP_003631080.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525102|gb|AET05556.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 873
Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust.
Identities = 249/642 (38%), Positives = 361/642 (56%), Gaps = 61/642 (9%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MP RN +SW M+ GY +G + +A LF + P ++V +WT M+ +++ +D+ARR+F
Sbjct: 198 MPVRNAISWNTMISGYARDGDLLQARRLFEESPVRDVFTWTAMVFAYVQSGMLDEARRVF 257
Query: 61 DMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARK 120
D MP K +A M+ GY Q ++D RE+F+ MP +NV SW T+ISGY N I AR+
Sbjct: 258 DEMPGKREMAYNVMIAGYVQYKKMDMARELFEAMPCRNVGSWNTIISGYGQNGDIAQARE 317
Query: 121 LFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAM--------------PMKSVVASNS 166
LF++M +++ VSW A++ GY Q G + + M + + +
Sbjct: 318 LFDMMTQRDCVSWAAIIAGYAQTGHYEKVMHMLVKMKRDGKSLNRSTFCCALSTCAGMAA 377
Query: 167 MILGLGQNGEVQK-------------------------ARVVFDQMREKDDATWSGMIKV 201
++LG +G+ K A VF++M+ KD +W+ M+
Sbjct: 378 LVLGKQVHGQAVKTGYDNGCLVGNALLEMYCKCGSIGEAYDVFERMQLKDIISWNTMLAG 437
Query: 202 YERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDV- 260
Y R G+ + + +F M+ G + P I++L + S + R+V V
Sbjct: 438 YARHGFGRQALLVFDSMKTAGFK---PDEITML-----IWSNNRLRKVGNTWVPTSLMNP 489
Query: 261 --DVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHE 318
+ +V S +T E + + + + S I IIS Y +Y L L +
Sbjct: 490 LGNTWVTSTSVT------EKQEERRV-NRIGSVCITFLLVIISAY-KYRLHACHLFPCNW 541
Query: 319 MFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAG 378
+ S + + VGVL ACS+TG G E F SM Y + P ++HY CM+DLLGRAG
Sbjct: 542 LLS--LYLTCIHNVGVLLACSHTGLTDRGTEYFYSMSKDYGITPNSKHYNCMIDLLGRAG 599
Query: 379 QVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSN 438
+E+A L+ MPFEPDA WG+LLGA R H +L E AA+ + +EP NAG Y+LLSN
Sbjct: 600 LLEEAHNLMRNMPFEPDAATWGALLGASRIHGNAELGEKAAEMVFNMEPNNAGMYVLLSN 659
Query: 439 IYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLE 498
+YA+ G++ DV +LR MR+ + K PG SW+EV+ K+H FT DC HPE I LE
Sbjct: 660 LYATLGKWVDVGKLRLKMRQLGIQKIPGYSWVEVQNKIHKFTVGDCF-HPEKDRIYAYLE 718
Query: 499 KIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLR 558
+I ++ G+ VLHDV+EEEK L+YHSEKLAVA+G++ +P G PIRVMKNLR
Sbjct: 719 EIDLKMKHEGHVSLVKLVLHDVEEEEKKRMLKYHSEKLAVAFGILTIPAGRPIRVMKNLR 778
Query: 559 VCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
VC DCH+ IK ISK++GR IILRD++RFH+ +G+CSC DYW
Sbjct: 779 VCEDCHNVIKYISKIVGRLIILRDSHRFHYVSEGICSCGDYW 820
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 119/332 (35%), Positives = 211/332 (63%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MP ++ +SW ++ YV+ G + EA LF + ++SW ++GG+++ + DARRLF
Sbjct: 136 MPYKDSISWNGLLAVYVQNGRLEEARRLFESKVDWELISWNCLMGGYVKRKMLGDARRLF 195
Query: 61 DMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARK 120
D MP ++ ++ M+ GY +DG + + R +F+E P ++V +WT M+ YV + +D AR+
Sbjct: 196 DHMPVRNAISWNTMISGYARDGDLLQARRLFEESPVRDVFTWTAMVFAYVQSGMLDEARR 255
Query: 121 LFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKA 180
+F+ MP K E+++ M+ GY Q ++ A ELF+AMP ++V + N++I G GQNG++ +A
Sbjct: 256 VFDEMPGKREMAYNVMIAGYVQYKKMDMARELFEAMPCRNVGSWNTIISGYGQNGDIAQA 315
Query: 181 RVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASL 240
R +FD M ++D +W+ +I Y + G+ +V+ + M+++G +N + LS CA +
Sbjct: 316 RELFDMMTQRDCVSWAAIIAGYAQTGHYEKVMHMLVKMKRDGKSLNRSTFCCALSTCAGM 375
Query: 241 ASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSII 300
A+L G+QVH Q V+ +D V + L+ MY KCG + + +F+ KDI+ WN+++
Sbjct: 376 AALVLGKQVHGQAVKTGYDNGCLVGNALLEMYCKCGSIGEAYDVFERMQLKDIISWNTML 435
Query: 301 SGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLV 332
+GYA++G G ++L VF M ++G PD++T++
Sbjct: 436 AGYARHGFGRQALLVFDSMKTAGFKPDEITML 467
Score = 194 bits (494), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 120/411 (29%), Positives = 217/411 (52%), Gaps = 24/411 (5%)
Query: 6 VVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPE 65
+V T + ++ G A +F MP KN+ SW +ML G++++ R+ DAR LFD+MP+
Sbjct: 48 IVKCTNSISTHMRNGHCHLALRVFDSMPYKNLFSWNLMLTGYVKNRRLVDARNLFDLMPQ 107
Query: 66 KDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVM 125
KD V+ M+ GY + G VDE + +FD MP K+ ISW +++ YV N R++ AR+LFE
Sbjct: 108 KDAVSWNVMLSGYVRSGCVDEAKLVFDNMPYKDSISWNGLLAVYVQNGRLEEARRLFESK 167
Query: 126 PEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFD 185
+ +SW ++ GY + + DA LF MP+++ ++ N+MI G ++G++ +AR +F+
Sbjct: 168 VDWELISWNCLMGGYVKRKMLGDARRLFDHMPVRNAISWNTMISGYARDGDLLQARRLFE 227
Query: 186 QMREKDDATWSGMIKVYERKGYELEVIDLFTLMQ-KEGVRVNFPSLISVLSVCASLASLD 244
+ +D TW+ M+ Y + G E +F M K + N +++ +D
Sbjct: 228 ESPVRDVFTWTAMVFAYVQSGMLDEARRVFDEMPGKREMAYNV-----MIAGYVQYKKMD 282
Query: 245 HGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYA 304
R++ + + C+ +V + +I+ Y + G++ + + +FD +D V W +II+GYA
Sbjct: 283 MARELF-EAMPCR---NVGSWNTIISGYGQNGDIAQARELFDMMTQRDCVSWAAIIAGYA 338
Query: 305 QYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIF-ESMKSKYLVEPK 363
Q G EK + + +M G + T LS C+ + G+++ +++K+ Y
Sbjct: 339 QTGHYEKVMHMLVKMKRDGKSLNRSTFCCALSTCAGMAALVLGKQVHGQAVKTGY----- 393
Query: 364 TEHYACMV-----DLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTH 409
C+V ++ + G + +A + E M + D I W ++L H
Sbjct: 394 --DNGCLVGNALLEMYCKCGSIGEAYDVFERMQLK-DIISWNTMLAGYARH 441
>gi|357436397|ref|XP_003588474.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477522|gb|AES58725.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 668
Score = 434 bits (1115), Expect = e-118, Method: Compositional matrix adjust.
Identities = 219/547 (40%), Positives = 342/547 (62%), Gaps = 14/547 (2%)
Query: 66 KDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVM 125
D+V + +++ Y + G ++ R++FDEM K+V++WT+MI+GY + A +
Sbjct: 124 NDLVIKNSILFMYAKCGSLEIARQVFDEMCVKDVVTWTSMITGYSQDGYASSATTALVLF 183
Query: 126 PE-------KNEVSWTAMLMGYTQCGRIQDAWEL----FKAMPMKSVVASNSMILGLGQN 174
E NE + ++++ G D ++ +K ++V +S++ +
Sbjct: 184 LEMVRDGLRPNEFALSSLVKCCGFLGSCVDGKQIHGCCWKYGFQENVFVGSSLVDMYARC 243
Query: 175 GEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVL 234
GE++++R+VFD++ K++ +W+ +I + RKG E + LF MQ+EG + ++L
Sbjct: 244 GELRESRLVFDELESKNEVSWNALISGFARKGEGEEALGLFVKMQREGFGATEFTYSALL 303
Query: 235 SVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIV 294
++ SL+ G+ +HA +++ + YV + L+ MY K G + K +FD D+V
Sbjct: 304 CSSSTTGSLEQGKWLHAHMMKSGKKLVGYVGNTLLHMYAKSGNICDAKKVFDRLVKVDVV 363
Query: 295 MWNSIISGYAQYGLGEKSLKVFHEM-FSSGVMPDDVTLVGVLSACSYTGKVKEGREIFES 353
NS++ GYAQ+GLG++++++F EM + P+D+T + VL+ACS+ G + EG FE
Sbjct: 364 SCNSMLIGYAQHGLGKEAVELFEEMMLWVEIEPNDITFLSVLTACSHAGLLDEGLYYFEL 423
Query: 354 MKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLD 413
MK KY +EPK HY +VDL GRAG ++ A IE MP EP+A IWG+LLGA + H +
Sbjct: 424 MK-KYGLEPKLSHYTTVVDLFGRAGLLDQAKSFIEEMPIEPNATIWGALLGASKMHKNTE 482
Query: 414 LAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVE 473
+ AA+K+L+L+P G + LLSNIYAS G++ DVA++RK M+ + K P CSW+E+E
Sbjct: 483 MGAYAAQKVLELDPFYPGAHTLLSNIYASAGQWKDVAKVRKEMKDSGLKKEPACSWVEIE 542
Query: 474 KKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHS 533
VH+F+ D +SHP+ + M E + ++E GY PD+S V VD++EK +L+YHS
Sbjct: 543 NSVHIFSAND-ISHPQKNKVYEMWENLNQKIKEIGYVPDTSHVHVFVDQQEKELNLQYHS 601
Query: 534 EKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGL 593
EKLA+A+ L+ G IR+MKN+RVCGDCHSAIK +S V+ REII+RD NRFHHF+DG
Sbjct: 602 EKLALAFALLNTKPGSVIRIMKNIRVCGDCHSAIKYVSLVVKREIIVRDTNRFHHFRDGS 661
Query: 594 CSCRDYW 600
CSCRDYW
Sbjct: 662 CSCRDYW 668
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 96/200 (48%), Gaps = 8/200 (4%)
Query: 209 LEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVL 268
L V+DL E R + L L C L L G+ VH L+ +F D+ + + +
Sbjct: 76 LHVLDLINNGSLEPDRTIYNKL---LKRCTMLGKLKQGKLVHTHLMNSKFRNDLVIKNSI 132
Query: 269 ITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEK---SLKVFHEMFSSGVM 325
+ MY KCG L + +FD KD+V W S+I+GY+Q G +L +F EM G+
Sbjct: 133 LFMYAKCGSLEIARQVFDEMCVKDVVTWTSMITGYSQDGYASSATTALVLFLEMVRDGLR 192
Query: 326 PDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMK 385
P++ L ++ C + G +G++I KY + + +VD+ R G++ ++
Sbjct: 193 PNEFALSSLVKCCGFLGSCVDGKQI-HGCCWKYGFQENVFVGSSLVDMYARCGELRESRL 251
Query: 386 LIEAMPFEPDAIIWGSLLGA 405
+ + + + + W +L+
Sbjct: 252 VFDELE-SKNEVSWNALISG 270
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/322 (23%), Positives = 151/322 (46%), Gaps = 29/322 (9%)
Query: 4 RNVVSWTAMVRGYVEEGMITEAGT---LFWQM------PEKNVVSWTVMLGGFIRDSRID 54
++VV+WT+M+ GY ++G + A T LF +M P + +S V GF+
Sbjct: 155 KDVVTWTSMITGYSQDGYASSATTALVLFLEMVRDGLRPNEFALSSLVKCCGFL--GSCV 212
Query: 55 DARRL----FDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYV 110
D +++ + +++V +++V Y + G + E R +FDE+ KN +SW +ISG+
Sbjct: 213 DGKQIHGCCWKYGFQENVFVGSSLVDMYARCGELRESRLVFDELESKNEVSWNALISGFA 272
Query: 111 NNNRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRI-QDAWELFKAMPMKS----- 160
+ A LF M + E +++A+L + G + Q W A MKS
Sbjct: 273 RKGEGEEALGLFVKMQREGFGATEFTYSALLCSSSTTGSLEQGKW--LHAHMMKSGKKLV 330
Query: 161 VVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLF-TLMQ 219
N+++ ++G + A+ VFD++ + D + + M+ Y + G E ++LF +M
Sbjct: 331 GYVGNTLLHMYAKSGNICDAKKVFDRLVKVDVVSCNSMLIGYAQHGLGKEAVELFEEMML 390
Query: 220 KEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELV 279
+ N + +SVL+ C+ LD G + + + + + ++ ++ + G L
Sbjct: 391 WVEIEPNDITFLSVLTACSHAGLLDEGLYYFELMKKYGLEPKLSHYTTVVDLFGRAGLLD 450
Query: 280 KGKLIFDNFA-SKDIVMWNSII 300
+ K + + +W +++
Sbjct: 451 QAKSFIEEMPIEPNATIWGALL 472
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 106/221 (47%), Gaps = 17/221 (7%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDM 62
+ NV +++V Y G + E+ +F ++ KN VSW ++ GF R ++A LF
Sbjct: 227 QENVFVGSSLVDMYARCGELRESRLVFDELESKNEVSWNALISGFARKGEGEEALGLFVK 286
Query: 63 MPEKDVVAQ----TNMVLGYCQDGRVDEGREIFDEMPK--KNVISW--TTMISGYVNNNR 114
M + A + ++ G +++G+ + M K K ++ + T++ Y +
Sbjct: 287 MQREGFGATEFTYSALLCSSSTTGSLEQGKWLHAHMMKSGKKLVGYVGNTLLHMYAKSGN 346
Query: 115 IDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASN-----SMIL 169
I A+K+F+ + + + VS +ML+GY Q G ++A ELF+ M + + N S++
Sbjct: 347 ICDAKKVFDRLVKVDVVSCNSMLIGYAQHGLGKEAVELFEEMMLWVEIEPNDITFLSVLT 406
Query: 170 GLGQNGEVQKARVVFDQMR----EKDDATWSGMIKVYERKG 206
G + + F+ M+ E + ++ ++ ++ R G
Sbjct: 407 ACSHAGLLDEGLYYFELMKKYGLEPKLSHYTTVVDLFGRAG 447
>gi|359488803|ref|XP_002272525.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950 [Vitis vinifera]
Length = 1291
Score = 433 bits (1114), Expect = e-118, Method: Compositional matrix adjust.
Identities = 218/551 (39%), Positives = 329/551 (59%), Gaps = 9/551 (1%)
Query: 58 RLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDV 117
++F + D T + Y R+D +F+++P W MI G+ + R
Sbjct: 742 KIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATDGRFLS 801
Query: 118 ARKLFEVMPEKN-EVSWTAMLMGYTQCGRIQDAW-------ELFKAMPMKSVVASNSMIL 169
+ +L+ M EK + A C + D L + +++
Sbjct: 802 SLELYSKMMEKGLKPDKFAFPFALKSCAGLSDLQRGKVIHQHLVCCGCSNDLFVDAALVD 861
Query: 170 GLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPS 229
+ G+++ AR+VFD+M +D +W+ MI Y GY E + F LM+ GV N S
Sbjct: 862 MYAKCGDIEAARLVFDKMAVRDLVSWTSMISGYAHNGYNSETLGFFDLMRSSGVIPNRVS 921
Query: 230 LISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFA 289
++SVL C +L +L G H+ +++ F+ D+ VA+ ++ MY KCG L + +FD A
Sbjct: 922 ILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLFDETA 981
Query: 290 SKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGRE 349
KD+V W+++I+ Y +G G K++ +F +M +GV P VT VLSACS++G ++EG+
Sbjct: 982 GKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGLLEEGKM 1041
Query: 350 IFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTH 409
F+ M ++++ K +YACMVDLLGRAGQ+ +A+ LIE MP EPDA IWGSLLGACR H
Sbjct: 1042 YFQLMTEEFVIARKLSNYACMVDLLGRAGQLSEAVDLIENMPVEPDASIWGSLLGACRIH 1101
Query: 410 MKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSW 469
LDLAE A L L+P +AG ++LLSNIYA++ R+++V ++RK M +R K G S
Sbjct: 1102 NNLDLAEKIADHLFHLDPVHAGYHVLLSNIYAAKSRWNEVEKVRKMMARRGANKIQGFSL 1161
Query: 470 IEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSL 529
+E + +VH F D SHP+ + LE++ ++ GY P + FVLHD++EE K +L
Sbjct: 1162 VEYDNQVHKFGVGD-RSHPQWEKLYAKLEELAAPMKHLGYVPLTDFVLHDIEEEAKEAAL 1220
Query: 530 RYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHF 589
YHSE+LA+A+GL+ G +R+ KNLR+CGDCH+AIKLISK++ R I++RD +RFH F
Sbjct: 1221 SYHSERLAIAFGLINTSPGTTLRITKNLRICGDCHNAIKLISKIVNRVILVRDMHRFHRF 1280
Query: 590 KDGLCSCRDYW 600
+DG+CSC DYW
Sbjct: 1281 EDGVCSCGDYW 1291
Score = 288 bits (738), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 179/560 (31%), Positives = 288/560 (51%), Gaps = 50/560 (8%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVV 69
+A+V Y + G + EA +F + + V WT M+ G+ +++ ++A LF M D V
Sbjct: 143 SALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEALALFSQMVMMDCV 202
Query: 70 --------------AQT-NMVLGYCQDGRVDE-------------------------GRE 89
AQ N+ G C G V
Sbjct: 203 VLDPVTLVSVVSACAQLLNVKAGSCVHGLVIRREFDGDLPLVNSLLNLYAKTGCEKIAAN 262
Query: 90 IFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGR 145
+F +MP+K+VISW+TMI+ Y NN + A LF M EK N V+ + L
Sbjct: 263 LFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAVSRN 322
Query: 146 IQDAWELFKAMPMKSV----VASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKV 201
+++ ++ K K S ++I + +A +F ++ +KD +W ++
Sbjct: 323 LEEGKKIHKIAVWKGFELDFSVSTALIDMYMKCSCPDEAVDLFQRLPKKDVVSWVALLSG 382
Query: 202 YERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVD 261
Y + G + + +F M +G++ + +++ +L+ + L +H +VR F+ +
Sbjct: 383 YAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQALCLHGYVVRSGFNSN 442
Query: 262 VYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMF- 320
V+V + LI +Y KCG L +F +D+V+W+S+I+ Y +G G ++L++F +M
Sbjct: 443 VFVGASLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGRGGEALEIFDQMVK 502
Query: 321 SSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQV 380
+S V P++VT + +LSACS+ G V+EG +IF+ M Y + P +EH+ MVDLLGR GQ+
Sbjct: 503 NSTVRPNNVTFLSILSACSHAGLVEEGLKIFDRMVHDYQLRPDSEHFGIMVDLLGRIGQL 562
Query: 381 EDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIY 440
AM +I MP +WG+LLGACR H +++ E AAK L L+P +AG YILLSNIY
Sbjct: 563 GKAMDIINRMPIPAGPHVWGALLGACRIHHNIEMGEAAAKNLFWLDPSHAGYYILLSNIY 622
Query: 441 ASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKI 500
A G++ +VAELR +++R + K G S +EV VH F D HP+ I +L K+
Sbjct: 623 AVDGKWDNVAELRTRIKERGLKKMFGQSMVEVRGGVHSFLASDRF-HPDSQKIYELLRKL 681
Query: 501 GGLLREAGYCPDSSFVLHDV 520
+ + Y PD F+LHD
Sbjct: 682 EAQMGKEVYIPDLDFLLHDT 701
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 114/432 (26%), Positives = 200/432 (46%), Gaps = 31/432 (7%)
Query: 2 PERNVVSWTAMVRGYVEEGMITEAGTLFWQM-------PEKNVVSWTVMLGGFIRDSRID 54
P NV W + +R Y E E LF M P+ + + +R +
Sbjct: 63 PHPNVHLWNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELG 122
Query: 55 DARRLFDMMPEK---DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVN 111
F ++ D+ + +V Y + G++ E ++F+E + + + WT+M++GY
Sbjct: 123 KVIHGFAKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQ 182
Query: 112 NNRIDVARKLFE--VMPEKNEVSWTAMLMGYTQCGRIQD--AWELFKAMPMK-----SVV 162
NN + A LF VM + + ++ + C ++ + A + ++ +
Sbjct: 183 NNDPEEALALFSQMVMMDCVVLDPVTLVSVVSACAQLLNVKAGSCVHGLVIRREFDGDLP 242
Query: 163 ASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEG 222
NS++ + G + A +F +M EKD +WS MI Y E ++LF M ++
Sbjct: 243 LVNSLLNLYAKTGCEKIAANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEKR 302
Query: 223 VRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGK 282
N +++S L CA +L+ G+++H V F++D V++ LI MY+KC +
Sbjct: 303 FEPNSVTVVSALQACAVSRNLEEGKKIHKIAVWKGFELDFSVSTALIDMYMKCSCPDEAV 362
Query: 283 LIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTG 342
+F KD+V W +++SGYAQ G+ KS+ VF M S G+ PD V +V +L+A S G
Sbjct: 363 DLFQRLPKKDVVSWVALLSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELG 422
Query: 343 KVKE-----GREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAI 397
++ G + S V A +++L + G + DA+KL + M D +
Sbjct: 423 IFQQALCLHGYVVRSGFNSNVFVG------ASLIELYSKCGSLGDAVKLFKGMIVR-DVV 475
Query: 398 IWGSLLGACRTH 409
IW S++ A H
Sbjct: 476 IWSSMIAAYGIH 487
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/369 (23%), Positives = 162/369 (43%), Gaps = 46/369 (12%)
Query: 79 CQDGRV--DEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAM 136
C +GR ++F + T + S Y + ARK+F+ P N W +
Sbjct: 14 CNNGRSVSQLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETPHPNVHLWNST 73
Query: 137 LMGYTQCGRIQDAWELFKAM-------------PMKSVVASNSMILGLG----------- 172
L Y + + ++ LF M P+ + +L LG
Sbjct: 74 LRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVIHGFAKKND 133
Query: 173 -----------------QNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLF 215
+ G++ +A VF++ + D W+ M+ Y++ E + LF
Sbjct: 134 EIGSDMFVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEALALF 193
Query: 216 TLM-QKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIK 274
+ M + V ++ +L+SV+S CA L ++ G VH ++R +FD D+ + + L+ +Y K
Sbjct: 194 SQMVMMDCVVLDPVTLVSVVSACAQLLNVKAGSCVHGLVIRREFDGDLPLVNSLLNLYAK 253
Query: 275 CGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGV 334
G +F KD++ W+++I+ YA ++L +FHEM P+ VT+V
Sbjct: 254 TGCEKIAANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSA 313
Query: 335 LSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEP 394
L AC+ + ++EG++I + K E ++D+ + ++A+ L + +P +
Sbjct: 314 LQACAVSRNLEEGKKIHKIAVWKGF-ELDFSVSTALIDMYMKCSCPDEAVDLFQRLP-KK 371
Query: 395 DAIIWGSLL 403
D + W +LL
Sbjct: 372 DVVSWVALL 380
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 80/338 (23%), Positives = 145/338 (42%), Gaps = 53/338 (15%)
Query: 16 YVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEK--------- 66
YV I A +F +P W VM+ GF D R + L+ M EK
Sbjct: 762 YVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATDGRFLSSLELYSKMMEKGLKPDKFAF 821
Query: 67 ------------------------------DVVAQTNMVLGYCQDGRVDEGREIFDEMPK 96
D+ +V Y + G ++ R +FD+M
Sbjct: 822 PFALKSCAGLSDLQRGKVIHQHLVCCGCSNDLFVDAALVDMYAKCGDIEAARLVFDKMAV 881
Query: 97 KNVISWTTMISGYVNNNRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWEL 152
++++SWT+MISGY +N F++M N VS ++L+ G ++ E
Sbjct: 882 RDLVSWTSMISGYAHNGYNSETLGFFDLMRSSGVIPNRVSILSVLLACGNLGALRKG-EW 940
Query: 153 FKAMPMKS-----VVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGY 207
F + +++ ++ + +++ + G + AR +FD+ KD WS MI Y G+
Sbjct: 941 FHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLFDETAGKDLVCWSAMIASYGIHGH 1000
Query: 208 ELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVA-- 265
+ IDLF M K GVR + + VLS C+ L+ G+ ++ QL+ +F + ++
Sbjct: 1001 GRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGLLEEGK-MYFQLMTEEFVIARKLSNY 1059
Query: 266 SVLITMYIKCGELVKGKLIFDNF-ASKDIVMWNSIISG 302
+ ++ + + G+L + + +N D +W S++
Sbjct: 1060 ACMVDLLGRAGQLSEAVDLIENMPVEPDASIWGSLLGA 1097
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 136/304 (44%), Gaps = 18/304 (5%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEK----NVVSWTVMLGGFIRDSRIDDA 56
MPE++V+SW+ M+ Y EA LF +M EK N V+ L +++
Sbjct: 267 MPEKDVISWSTMIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAVSRNLEEG 326
Query: 57 RRLFDMMP----EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+++ + E D T ++ Y + DE ++F +PKK+V+SW ++SGY N
Sbjct: 327 KKIHKIAVWKGFELDFSVSTALIDMYMKCSCPDEAVDLFQRLPKKDVVSWVALLSGYAQN 386
Query: 113 N----RIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWEL----FKAMPMKSVVAS 164
+ V R + + + V+ +L ++ G Q A L ++ +V
Sbjct: 387 GMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQALCLHGYVVRSGFNSNVFVG 446
Query: 165 NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEG-V 223
S+I + G + A +F M +D WS MI Y G E +++F M K V
Sbjct: 447 ASLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGRGGEALEIFDQMVKNSTV 506
Query: 224 RVNFPSLISVLSVCASLASLDHGRQVHAQLVR-CQFDVDVYVASVLITMYIKCGELVKGK 282
R N + +S+LS C+ ++ G ++ ++V Q D +++ + + G+L K
Sbjct: 507 RPNNVTFLSILSACSHAGLVEEGLKIFDRMVHDYQLRPDSEHFGIMVDLLGRIGQLGKAM 566
Query: 283 LIFD 286
I +
Sbjct: 567 DIIN 570
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 89/175 (50%), Gaps = 5/175 (2%)
Query: 230 LISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFA 289
L+ + C + S+ Q+H+Q+ + D + A+ L ++Y KC L + +FD
Sbjct: 7 LVDLFQACNNGRSVS---QLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETP 63
Query: 290 SKDIVMWNSIISGYAQYGLGEKSLKVFHEMF-SSGVMPDDVTLVGVLSACSYTGKVKEGR 348
++ +WNS + Y + E++L++FH M ++G PD+ T+ L AC+ ++ G+
Sbjct: 64 HPNVHLWNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGK 123
Query: 349 EIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
I K + + +V+L + GQ+ +A+K+ E PD ++W S++
Sbjct: 124 VIHGFAKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEFQ-RPDTVLWTSMV 177
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 102/217 (47%), Gaps = 18/217 (8%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTV-MLGGFIRDSRIDDARR- 58
M R++VSWT+M+ GY G +E F M V+ V +L + + R+
Sbjct: 879 MAVRDLVSWTSMISGYAHNGYNSETLGFFDLMRSSGVIPNRVSILSVLLACGNLGALRKG 938
Query: 59 ------LFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+ E D++ T ++ Y + G +D R +FDE K+++ W+ MI+ Y +
Sbjct: 939 EWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLFDETAGKDLVCWSAMIASYGIH 998
Query: 113 NRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVA---SN 165
A LF+ M + + V++T +L + G +++ F+ M + V+A SN
Sbjct: 999 GHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGLLEEGKMYFQLMTEEFVIARKLSN 1058
Query: 166 --SMILGLGQNGEVQKARVVFDQMR-EKDDATWSGMI 199
M+ LG+ G++ +A + + M E D + W ++
Sbjct: 1059 YACMVDLLGRAGQLSEAVDLIENMPVEPDASIWGSLL 1095
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 85/440 (19%), Positives = 178/440 (40%), Gaps = 54/440 (12%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEK-----NVVSWTVMLGGFIRDSRIDD 55
M R+VV W++M+ Y G EA +F QM + N V++ +L +++
Sbjct: 469 MIVRDVVIWSSMIAAYGIHGRGGEALEIFDQMVKNSTVRPNNVTFLSILSACSHAGLVEE 528
Query: 56 ARRLFDMM-------PEKDVVAQTNMVLGYCQDGRVDEGREIFDEMP-KKNVISWTTMIS 107
++FD M P+ + +LG + G++ + +I + MP W ++
Sbjct: 529 GLKIFDRMVHDYQLRPDSEHFGIMVDLLG--RIGQLGKAMDIINRMPIPAGPHVWGALLG 586
Query: 108 GYVNNNRIDV----ARKLFEVMPEKNEVSWTAMLMG-YTQCGRIQDAWELFKAMPMKSVV 162
++ I++ A+ LF + P + + +L Y G+ + EL ++ +
Sbjct: 587 ACRIHHNIEMGEAAAKNLFWLDP--SHAGYYILLSNIYAVDGKWDNVAEL------RTRI 638
Query: 163 ASNSMILGLGQNG-EVQKARVVF---DQMREKDDATWSGMIKVYERKGYELEVIDLFTLM 218
+ GQ+ EV+ F D+ + + K+ + G E+ + DL L+
Sbjct: 639 KERGLKKMFGQSMVEVRGGVHSFLASDRFHPDSQKIYELLRKLEAQMGKEVYIPDLDFLL 698
Query: 219 QKEGVRVNFPSLISVLSV----------CASLASLDHGRQVHAQLVRCQFDVDVYVASVL 268
G + F I +++ ++ HA++ D + +
Sbjct: 699 HDTGAVLQFWQRIKATESKYKTIGSAPGTDTISCFSCLKKTHAKIFAYGLQYDSRILTKF 758
Query: 269 ITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDD 328
MY+ + ++F++ + +WN +I G+A G SL+++ +M G+ PD
Sbjct: 759 AIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATDGRFLSSLELYSKMMEKGLKPDK 818
Query: 329 VTLVGVLSACSYTGKVKEGREIFESM-----KSKYLVEPKTEHYACMVDLLGRAGQVEDA 383
L +C+ ++ G+ I + + + V+ A +VD+ + G +E A
Sbjct: 819 FAFPFALKSCAGLSDLQRGKVIHQHLVCCGCSNDLFVD------AALVDMYAKCGDIEAA 872
Query: 384 MKLIEAMPFEPDAIIWGSLL 403
+ + M D + W S++
Sbjct: 873 RLVFDKMAVR-DLVSWTSMI 891
>gi|296088012|emb|CBI35295.3| unnamed protein product [Vitis vinifera]
Length = 645
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 227/598 (37%), Positives = 346/598 (57%), Gaps = 10/598 (1%)
Query: 12 MVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQ 71
+ R Y+ + A LF ++P +V+ W ++ + + D A L+ M V
Sbjct: 49 LTRLYLSCNQVVLARRLFDEIPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPN 108
Query: 72 TN---MVLGYCQDG-RVDEGREIFDEMP----KKNVISWTTMISGYVNNNRIDVARKLFE 123
VL C +++G EI + +V T ++ Y + A++LF
Sbjct: 109 KYTYPFVLKACSGLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFS 168
Query: 124 VMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGE-VQKARV 182
M ++ V+W AM+ G + G DA +L M + + ++S I+G+ + + AR
Sbjct: 169 SMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTCQCLLYARK 228
Query: 183 VFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLAS 242
+FD M +++ +WS MI Y E +D+F +MQ G+ + +++ VL C+ LA+
Sbjct: 229 IFDVMGVRNEVSWSAMIGGYVASDCMKEALDIFRMMQLSGIDPDLTTMLGVLPACSHLAA 288
Query: 243 LDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISG 302
L HG H L+ F D + + LI MY KCG++ + +F+ DIV WN++I G
Sbjct: 289 LQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIG 348
Query: 303 YAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEP 362
Y +GLG ++L +FH++ + G+ PDD+T + +LS+CS++G V EGR F++M + + P
Sbjct: 349 YGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVP 408
Query: 363 KTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKL 422
+ EH CMVD+LGRAG +++A I MPFEPD IW +LL ACR H ++L E +KK+
Sbjct: 409 RMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHKNIELGEEVSKKI 468
Query: 423 LQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGR 482
L P++ G ++LLSNIY++ GR+ D A +R + + K PGCSWIE+ VH F G
Sbjct: 469 QSLGPESTGNFVLLSNIYSAAGRWDDAAHIRITQKDWGLKKIPGCSWIEINGIVHAFVGG 528
Query: 483 DCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGL 542
D SH + I R LE++ ++ GY + SFV DV+EEEK L YHSEKLA+A+G+
Sbjct: 529 D-QSHLQLSQINRKLEELLVEMKRLGYQAECSFVFQDVEEEEKEQILLYHSEKLAIAFGI 587
Query: 543 VKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
+ L G PI V KNLRVCGDCH+AIK ++ + REI +RDANRFHHFK+G C+C D+W
Sbjct: 588 LNLKAGRPILVTKNLRVCGDCHTAIKFMTLITKREITVRDANRFHHFKNGTCNCGDFW 645
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 124/257 (48%), Gaps = 15/257 (5%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDM 62
E +V TA+V Y + G++ EA LF M ++VV+W M+ G DDA +L
Sbjct: 141 ESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQ 200
Query: 63 MPEKDVVAQTNMVLGY---CQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVAR 119
M E+ + ++ ++G CQ + R+IFD M +N +SW+ MI GYV ++ + A
Sbjct: 201 MQEEGICPNSSTIVGVLPTCQ--CLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEAL 258
Query: 120 KLFEVMPEKN-EVSWTAML--------MGYTQCGRIQDAWELFKAMPMKSVVASNSMILG 170
+F +M + T ML + Q G + + + +++ N++I
Sbjct: 259 DIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLIC-NALIDM 317
Query: 171 LGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSL 230
+ G++ AR VF++M D +W+ MI Y G +E + LF + G++ + +
Sbjct: 318 YSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITF 377
Query: 231 ISVLSVCASLASLDHGR 247
I +LS C+ + GR
Sbjct: 378 ICLLSSCSHSGLVMEGR 394
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 99/204 (48%), Gaps = 9/204 (4%)
Query: 231 ISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFAS 290
+ +L C SL +++H ++ + D V L +Y+ C ++V + +FD +
Sbjct: 12 LHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPN 71
Query: 291 KDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREI 350
+++WN II YA G + ++ ++H M GV P+ T VL ACS +++G EI
Sbjct: 72 PSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEI 131
Query: 351 FESMKSKYLVEPKTEHYAC--MVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRT 408
K + +++ + C +VD + G + +A +L +M D + W +++ C
Sbjct: 132 HSHAK---MFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHR-DVVAWNAMIAGCSL 187
Query: 409 HMKLDLAEVAAKKLLQLEPKNAGP 432
+ L + A + ++Q++ + P
Sbjct: 188 Y---GLCDDAVQLIMQMQEEGICP 208
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 90/218 (41%), Gaps = 18/218 (8%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV-VSWTVMLGGFIRDSRIDDARRL 59
M RN VSW+AM+ GYV + EA +F M + T MLG S + +
Sbjct: 233 MGVRNEVSWSAMIGGYVASDCMKEALDIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHG 292
Query: 60 FDMMP-------EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGY--- 109
F D + ++ Y + G++ RE+F+ M + +++SW MI GY
Sbjct: 293 FCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIH 352
Query: 110 -VNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASN--- 165
+ + + L + + +++++ +L + G + + F AM +
Sbjct: 353 GLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEH 412
Query: 166 --SMILGLGQNGEVQKARVVFDQMR-EKDDATWSGMIK 200
M+ LG+ G + +A M E D WS ++
Sbjct: 413 CICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLS 450
>gi|225441187|ref|XP_002266244.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 722
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 233/650 (35%), Positives = 370/650 (56%), Gaps = 55/650 (8%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQMPEK-----NVVSWTVMLGGFIRDSRIDDARRL 59
N+ W M+RGY EA L+ M K N ++ +L R S ++ +
Sbjct: 74 NLFMWNTMIRGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLSSLEPGHEV 133
Query: 60 FDMMP----EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRI 115
+ E D+ + ++ Y G ++ R +FDE ++++S+ TMI GY N+
Sbjct: 134 HSHIIKHGFESDLFVRNALIHLYSVFGNLNLARTLFDESLVRDLVSYNTMIKGYAEVNQP 193
Query: 116 DVARKLFE------VMPEK-----------------------------------NEVSWT 134
+ A LF ++P++ N + +
Sbjct: 194 ESALCLFGEMQNSGILPDEFTFVALFSVCSVLNEPNVGKQIHAQVYKNLRSIDSNILLKS 253
Query: 135 AMLMGYTQCGRIQDAWELFKAM-PMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDA 193
A++ Y +CG I A +F M KS A +SM+ G + GE+ AR +F+ M E+D
Sbjct: 254 AIVDMYAKCGLINIAERVFSTMGTSKSAAAWSSMVCGYARCGEINVARKLFNHMHERDVI 313
Query: 194 TWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQL 253
+W+ MI Y + G E ++LF M+ G++ + +L++VLS CA L + D G++++ Q
Sbjct: 314 SWTAMISGYSQAGQCSEALELFKEMEALGIKPDEVTLVAVLSACARLGAFDLGKRLYHQY 373
Query: 254 VRCQ-FDVDVYVASVLITMYIKCGELVKGKLIFDNFAS--KDIVMWNSIISGYAQYGLGE 310
+ F+ + + + ++ MY KCG + IF K ++NS+I+G AQ+GLGE
Sbjct: 374 IENGVFNQNTILTAAVMDMYAKCGSIDSALEIFRRVGKNMKTGFVFNSMIAGLAQHGLGE 433
Query: 311 KSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACM 370
++ VF E+ S+G+ PD+VT VGVL AC ++G ++EG+++FESM + Y ++P+ EHY CM
Sbjct: 434 TAITVFRELISTGLKPDEVTFVGVLCACGHSGLIEEGKKLFESMFNAYGIKPQMEHYGCM 493
Query: 371 VDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNA 430
VDLLGR G +E+A L++ MPFE +++IW +LL ACRTH + + E+A +KLL++E ++
Sbjct: 494 VDLLGRYGCLEEAYDLVQKMPFEANSVIWRALLSACRTHGNVKIGEIAGQKLLEMEAQHG 553
Query: 431 GPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEH 490
Y+LLSNI A ++ + ++RK M + KPPG S+IE+ +H F D SHP+
Sbjct: 554 ARYVLLSNILADANQWEEARQVRKVMEDHGIRKPPGWSYIELGGAIHRFVASD-KSHPQG 612
Query: 491 PMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVP 550
I ML+ + L+ AGY P+++ V+ D+DEEEK + YHSEKLA+A+GL+
Sbjct: 613 KEIELMLKDMAMRLKSAGYVPNTAQVMFDIDEEEKESVVSYHSEKLALAFGLMYCSPTDT 672
Query: 551 IRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
IR++KNLR+C DCH A KL+S++ GREI +RD RFHHF++G CSC D+W
Sbjct: 673 IRIVKNLRICADCHKAFKLVSEIYGREITVRDTMRFHHFRNGSCSCMDFW 722
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/351 (24%), Positives = 162/351 (46%), Gaps = 44/351 (12%)
Query: 80 QDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEK-----NEVSWT 134
+DG +D R +F ++ N+ W TMI GY ++ A L+ M K N ++
Sbjct: 57 KDG-LDHSRLLFSQIDCPNLFMWNTMIRGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFP 115
Query: 135 AMLMGYTQCGRIQDAWE----LFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREK 190
+L + ++ E + K + N++I G + AR +FD+ +
Sbjct: 116 FLLNSCARLSSLEPGHEVHSHIIKHGFESDLFVRNALIHLYSVFGNLNLARTLFDESLVR 175
Query: 191 DDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVH 250
D +++ MIK Y + LF MQ G+ + + +++ SVC+ L + G+Q+H
Sbjct: 176 DLVSYNTMIKGYAEVNQPESALCLFGEMQNSGILPDEFTFVALFSVCSVLNEPNVGKQIH 235
Query: 251 AQLVRC--QFDVDVYVASVLITMYIK--------------------------------CG 276
AQ+ + D ++ + S ++ MY K CG
Sbjct: 236 AQVYKNLRSIDSNILLKSAIVDMYAKCGLINIAERVFSTMGTSKSAAAWSSMVCGYARCG 295
Query: 277 ELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLS 336
E+ + +F++ +D++ W ++ISGY+Q G ++L++F EM + G+ PD+VTLV VLS
Sbjct: 296 EINVARKLFNHMHERDVISWTAMISGYSQAGQCSEALELFKEMEALGIKPDEVTLVAVLS 355
Query: 337 ACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLI 387
AC+ G G+ ++ + T A ++D+ + G ++ A+++
Sbjct: 356 ACARLGAFDLGKRLYHQYIENGVFNQNTILTAAVMDMYAKCGSIDSALEIF 406
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 150/307 (48%), Gaps = 12/307 (3%)
Query: 171 LGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGV----RVN 226
LG + +R++F Q+ + W+ MI+ Y R E I L+ M +G+
Sbjct: 54 LGSKDGLDHSRLLFSQIDCPNLFMWNTMIRGYSRSDNPREAIVLYMSMIAKGIAPPNNFT 113
Query: 227 FPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFD 286
FP L L+ CA L+SL+ G +VH+ +++ F+ D++V + LI +Y G L + +FD
Sbjct: 114 FPFL---LNSCARLSSLEPGHEVHSHIIKHGFESDLFVRNALIHLYSVFGNLNLARTLFD 170
Query: 287 NFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKE 346
+D+V +N++I GYA+ E +L +F EM +SG++PD+ T V + S CS +
Sbjct: 171 ESLVRDLVSYNTMIKGYAEVNQPESALCLFGEMQNSGILPDEFTFVALFSVCSVLNEPNV 230
Query: 347 GREIFESM-KSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
G++I + K+ ++ + +VD+ + G + A ++ M A W S++
Sbjct: 231 GKQIHAQVYKNLRSIDSNILLKSAIVDMYAKCGLINIAERVFSTMGTSKSAAAWSSMVCG 290
Query: 406 CRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPP 465
+ + VA K + ++ + + + Y+ G+ + EL K M IKP
Sbjct: 291 ---YARCGEINVARKLFNHMHERDVISWTAMISGYSQAGQCSEALELFKEMEALG-IKPD 346
Query: 466 GCSWIEV 472
+ + V
Sbjct: 347 EVTLVAV 353
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 118/232 (50%), Gaps = 16/232 (6%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQM-PEKNVVSWTVMLGGFIRDSRIDDARRLFD 61
+ N++ +A+V Y + G+I A +F M K+ +W+ M+ G+ R I+ AR+LF+
Sbjct: 246 DSNILLKSAIVDMYAKCGLINIAERVFSTMGTSKSAAAWSSMVCGYARCGEINVARKLFN 305
Query: 62 MMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMP----KKNVISWTTMISGYVNNNRIDV 117
M E+DV++ T M+ GY Q G+ E E+F EM K + ++ ++S D+
Sbjct: 306 HMHERDVISWTAMISGYSQAGQCSEALELFKEMEALGIKPDEVTLVAVLSACARLGAFDL 365
Query: 118 ARKLFEVMPE-----KNEVSWTAMLMGYTQCGRIQDAWELFKAM--PMKSVVASNSMILG 170
++L+ E +N + A++ Y +CG I A E+F+ + MK+ NSMI G
Sbjct: 366 GKRLYHQYIENGVFNQNTILTAAVMDMYAKCGSIDSALEIFRRVGKNMKTGFVFNSMIAG 425
Query: 171 LGQNGEVQKARVVFDQM----REKDDATWSGMIKVYERKGYELEVIDLFTLM 218
L Q+G + A VF ++ + D+ T+ G++ G E LF M
Sbjct: 426 LAQHGLGETAITVFRELISTGLKPDEVTFVGVLCACGHSGLIEEGKKLFESM 477
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 100/227 (44%), Gaps = 21/227 (9%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV----VSWTVMLGGFIRDSRIDDA 56
M ER+V+SWTAM+ GY + G +EA LF +M + V+ +L R D
Sbjct: 307 MHERDVISWTAMISGYSQAGQCSEALELFKEMEALGIKPDEVTLVAVLSACARLGAFDLG 366
Query: 57 RRLFDMMPEKDVVAQTNMVLG-----YCQDGRVDEGREIFDEMPK--KNVISWTTMISGY 109
+RL+ E V Q ++ Y + G +D EIF + K K + +MI+G
Sbjct: 367 KRLYHQYIENGVFNQNTILTAAVMDMYAKCGSIDSALEIFRRVGKNMKTGFVFNSMIAGL 426
Query: 110 VNN----NRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASN 165
+ I V R+L + +EV++ +L G I++ +LF++M +
Sbjct: 427 AQHGLGETAITVFRELISTGLKPDEVTFVGVLCACGHSGLIEEGKKLFESMFNAYGIKPQ 486
Query: 166 -----SMILGLGQNGEVQKARVVFDQMR-EKDDATWSGMIKVYERKG 206
M+ LG+ G +++A + +M E + W ++ G
Sbjct: 487 MEHYGCMVDLLGRYGCLEEAYDLVQKMPFEANSVIWRALLSACRTHG 533
>gi|115443695|ref|NP_001045627.1| Os02g0106300 [Oryza sativa Japonica Group]
gi|50252103|dbj|BAD28089.1| putative pentatricopeptide (PPR) repeat-containing protein-like
protein [Oryza sativa Japonica Group]
gi|113535158|dbj|BAF07541.1| Os02g0106300 [Oryza sativa Japonica Group]
gi|215766741|dbj|BAG98969.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 751
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 224/679 (32%), Positives = 373/679 (54%), Gaps = 80/679 (11%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MP+ N+ + A++ ++ + LF MPE++ VS+ ++ GF + +L+
Sbjct: 74 MPDPNLFTRNALLSALAHSRLVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLY 133
Query: 61 DMMPEKDVVAQTNMVLG----------------------------------------YCQ 80
+ ++ V T + L Y +
Sbjct: 134 RALLREESVRPTRITLSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAK 193
Query: 81 DGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGY 140
G + + R +F EM K V+ + T+I+G + I+ A+ LF++M +++ ++WT M+ G
Sbjct: 194 MGLIRDARRVFQEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGL 253
Query: 141 TQCGRIQDAWELFKAM----------PMKSVVASNSMILGLGQNGEVQK----------- 179
TQ G +A ++F+ M S++ + + L + ++
Sbjct: 254 TQNGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTWYEDNV 313
Query: 180 ------------------ARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKE 221
A VF +M ++ +W+ MI Y + E + F+ MQ +
Sbjct: 314 FVGSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMD 373
Query: 222 GVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKG 281
G++ + +L SV+S CA+LASL+ G Q H + + V++ L+T+Y KCG +
Sbjct: 374 GIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDA 433
Query: 282 KLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYT 341
+FD + D V W ++++GYAQ+G ++++ +F +M ++G+ PD VT +GVLSACS
Sbjct: 434 HRLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLANGLKPDGVTFIGVLSACSRA 493
Query: 342 GKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGS 401
G V++G + F+SM+ + + P +HY CM+DL R+G+ ++A + I+ MP PDA W +
Sbjct: 494 GLVEKGCDYFDSMQKDHGIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWAT 553
Query: 402 LLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNV 461
LL +CR +++ + AA+ LL+ +P+N Y+LL +++A++G++ +VA LR+ MR R V
Sbjct: 554 LLSSCRLRGNMEIGKWAAENLLETDPQNPASYVLLCSMHAAKGQWTEVAHLRRGMRDRQV 613
Query: 462 IKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVD 521
K PGCSWI+ + KVH+F+ D SHP I LE + + E GY PD S VLHDV
Sbjct: 614 KKEPGCSWIKYKNKVHIFSADD-QSHPFSSRIYEKLEWLNSKMAEEGYKPDVSSVLHDVA 672
Query: 522 EEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILR 581
+ +KVH + +HSEKLA+A+GL+ +P+ +PIR++KNLRVC DCH+A K ISK+ GR+I++R
Sbjct: 673 DADKVHMISHHSEKLAIAFGLIFVPQEMPIRIVKNLRVCVDCHNATKFISKITGRDILVR 732
Query: 582 DANRFHHFKDGLCSCRDYW 600
DA RFH F DG CSC D+W
Sbjct: 733 DAVRFHKFSDGTCSCGDFW 751
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 110/401 (27%), Positives = 209/401 (52%), Gaps = 11/401 (2%)
Query: 12 MVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQ 71
++ Y + G + A +F +MP+ N+ + +L + D RLF MPE+D V+
Sbjct: 54 LLTAYAKSGRLARARRVFDEMPDPNLFTRNALLSALAHSRLVPDMERLFASMPERDAVSY 113
Query: 72 TNMVLGYCQDGRVDEGREIFDEM-------PKKNVISWTTMISGYVNNNRI--DVARKLF 122
++ G+ G +++ + P + +S M++ +++ + V ++
Sbjct: 114 NALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIMVASALSDRALGHSVHCQVL 173
Query: 123 EVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARV 182
+ + ++ Y + G I+DA +F+ M K+VV N++I GL + ++ A+
Sbjct: 174 RLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLITGLLRCKMIEDAKG 233
Query: 183 VFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLAS 242
+F M ++D TW+ M+ + G +LE +D+F M+ EGV ++ + S+L+ C +LA+
Sbjct: 234 LFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAA 293
Query: 243 LDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISG 302
L+ G+Q+HA + R ++ +V+V S L+ MY KC + + +F ++I+ W ++I G
Sbjct: 294 LEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVG 353
Query: 303 YAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEP 362
Y Q E++++ F EM G+ PDD TL V+S+C+ ++EG + L+
Sbjct: 354 YGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRY 413
Query: 363 KTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
T A +V L G+ G +EDA +L + M F D + W +L+
Sbjct: 414 ITVSNA-LVTLYGKCGSIEDAHRLFDEMSFH-DQVSWTALV 452
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 104/249 (41%), Gaps = 63/249 (25%)
Query: 165 NSMILGLGQNGEVQKARVVFDQ-------------------------------MREKDDA 193
N ++ ++G + +AR VFD+ M E+D
Sbjct: 52 NHLLTAYAKSGRLARARRVFDEMPDPNLFTRNALLSALAHSRLVPDMERLFASMPERDAV 111
Query: 194 TWSGMIKVYERKGYELEVIDLF-TLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQ 252
+++ +I + G + L+ L+++E VR +L +++ V ++L+ G VH Q
Sbjct: 112 SYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIMVASALSDRALGHSVHCQ 171
Query: 253 LVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSII------------ 300
++R F +V S L+ MY K G + + +F +K +VM+N++I
Sbjct: 172 VLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLITGLLRCKMIEDA 231
Query: 301 -------------------SGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYT 341
+G Q GL ++L VF M + GV D T +L+AC
Sbjct: 232 KGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGAL 291
Query: 342 GKVKEGREI 350
++EG++I
Sbjct: 292 AALEEGKQI 300
>gi|18418348|ref|NP_567948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635622|sp|O81767.2|PP348_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g33990; AltName: Full=Protein EMBRYO DEFECTIVE 2758
gi|332660906|gb|AEE86306.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 823
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 232/617 (37%), Positives = 363/617 (58%), Gaps = 21/617 (3%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVML------GGFIRDSRID 54
MP R++ SW AM+ GY + G EA TL + + V+ +L G F R I
Sbjct: 211 MPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIH 270
Query: 55 DARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNR 114
+ E ++ ++ Y + GR+ + +++FD M +++ISW ++I Y N +
Sbjct: 271 SYSIKHGL--ESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQ 328
Query: 115 IDVARKLFEVM------PE-KNEVSWTAML--MGYTQCGRIQDAWELFKAMPMKSVVASN 165
A LF+ M P+ +S ++L +G + R + L K ++ + N
Sbjct: 329 PLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGN 388
Query: 166 SMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEG-VR 224
++++ + G V AR VF+ + D +W+ +I Y + G+ E I+++ +M++EG +
Sbjct: 389 AVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIA 448
Query: 225 VNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLI 284
N + +SVL C+ +L G ++H +L++ +DV+V + L MY KCG L +
Sbjct: 449 ANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSL 508
Query: 285 FDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKV 344
F + V WN++I+ + +G GEK++ +F EM GV PD +T V +LSACS++G V
Sbjct: 509 FYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLV 568
Query: 345 KEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLG 404
EG+ FE M++ Y + P +HY CMVD+ GRAGQ+E A+K I++M +PDA IWG+LL
Sbjct: 569 DEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLS 628
Query: 405 ACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKP 464
ACR H +DL ++A++ L ++EP++ G ++LLSN+YAS G++ V E+R + + K
Sbjct: 629 ACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKT 688
Query: 465 PGCSWIEVEKKVHMF-TGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEE 523
PG S +EV+ KV +F TG +HP + + R L + L+ GY PD FVL DV+++
Sbjct: 689 PGWSSMEVDNKVEVFYTGNQ--THPMYEEMYRELTALQAKLKMIGYVPDHRFVLQDVEDD 746
Query: 524 EKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDA 583
EK H L HSE+LA+A+ L+ P IR+ KNLRVCGDCHS K ISK+ REII+RD+
Sbjct: 747 EKEHILMSHSERLAIAFALIATPAKTTIRIFKNLRVCGDCHSVTKFISKITEREIIVRDS 806
Query: 584 NRFHHFKDGLCSCRDYW 600
NRFHHFK+G+CSC DYW
Sbjct: 807 NRFHHFKNGVCSCGDYW 823
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 114/479 (23%), Positives = 211/479 (44%), Gaps = 47/479 (9%)
Query: 4 RNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMM 63
+NV +V Y G + A F + ++V +W +M+ G+ R + R F +
Sbjct: 84 QNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLF 143
Query: 64 -------PEK------------------------------DVVAQTNMVLGYCQDGRVDE 86
P+ DV +++ Y + V
Sbjct: 144 MLSSGLTPDYRTFPSVLKACRTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGN 203
Query: 87 GREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRI 146
R +FDEMP +++ SW MISGY + A L + + V+ ++L T+ G
Sbjct: 204 ARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAMDSVTVVSLLSACTEAGDF 263
Query: 147 QDAWEL----FKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVY 202
+ K + SN +I + G ++ + VFD+M +D +W+ +IK Y
Sbjct: 264 NRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAY 323
Query: 203 ERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHA-QLVRCQFDVD 261
E L I LF M+ ++ + +LIS+ S+ + L + R V L + F D
Sbjct: 324 ELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLED 383
Query: 262 VYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFS 321
+ + + ++ MY K G + + +F+ + D++ WN+IISGYAQ G +++++++ M
Sbjct: 384 ITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEE 443
Query: 322 SG-VMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQV 380
G + + T V VL ACS G +++G ++ + L + D+ G+ G++
Sbjct: 444 EGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLY-LDVFVVTSLADMYGKCGRL 502
Query: 381 EDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQ--LEPKNAGPYILLS 437
EDA+ L +P +++ W +L+ H + A + K++L ++P + LLS
Sbjct: 503 EDALSLFYQIP-RVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLS 560
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 87/179 (48%), Gaps = 10/179 (5%)
Query: 232 SVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASK 291
++ C +L S + +HA+LV + +V +++ L+ +Y G + + FD+ ++
Sbjct: 59 TLFRYCTNLQS---AKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNR 115
Query: 292 DIVMWNSIISGYAQYGLGEKSLKVFHE-MFSSGVMPDDVTLVGVLSACSYTGKVKEGREI 350
D+ WN +ISGY + G + ++ F M SSG+ PD T VL AC V +G +I
Sbjct: 116 DVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACR---TVIDGNKI 172
Query: 351 FESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL-GACRT 408
+ K+ A ++ L R V +A L + MP D W +++ G C++
Sbjct: 173 -HCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVR-DMGSWNAMISGYCQS 229
>gi|296086269|emb|CBI31710.3| unnamed protein product [Vitis vinifera]
Length = 649
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 227/568 (39%), Positives = 327/568 (57%), Gaps = 44/568 (7%)
Query: 72 TNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEV 131
T+++ Y + D R +FD P + I W +MI Y + + + A +++ M EK +
Sbjct: 87 THLINLYSLFHKCDLARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGGL 146
Query: 132 SWTAMLMG-----YTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQ 186
+ Y++ G ++ A E+F MP + VVA N+MI GL Q+ + AR VFDQ
Sbjct: 147 ERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPYVARRVFDQ 206
Query: 187 MREKDDATWSGMIKVYERKGYELEVIDLFT------------------------------ 216
M ++DD +W M+ Y G +EV++LF
Sbjct: 207 MVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVTWNVIIAAYMQNGHAKEAISSFH 266
Query: 217 LMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCG 276
M+ E N + +SVL A LA+ G HA +++ F + V + LI MY KCG
Sbjct: 267 QMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCG 326
Query: 277 ELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLS 336
+L + +F+ KD V WN+++SGYA +G G++++ +F M S V D V+ V VLS
Sbjct: 327 QLDYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLS 386
Query: 337 ACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDA 396
AC + G V+EGR+IF SM KY ++P EHYACMVDLLGRAG ++ + I+ MP EPDA
Sbjct: 387 ACRHAGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDA 446
Query: 397 IIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNM 456
+WG+LLG+CR H + L EVA L++LEP+N +++LS+IYA GR+ D + R M
Sbjct: 447 GVWGALLGSCRMHSNVKLGEVALDHLVKLEPRNPAHFVVLSSIYAQSGRWADAGKARSKM 506
Query: 457 RKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPE----HPMIMRMLEKIGGLLREAGYCPD 512
+ K PGCSW+E++ KVH F D SHP+ H + +LEK + + GY PD
Sbjct: 507 NDLGLKKTPGCSWVELKNKVHAFRVGD-KSHPQLESMHLLWNTLLEK----MEKIGYVPD 561
Query: 513 SSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISK 572
S VL +V+EE+K L HSE+LA+ + L+ P G I+++KNLRVC DCH+ K ISK
Sbjct: 562 RSCVLQNVEEEDKEMFLYSHSERLAITFALLNTPPGSTIQIVKNLRVCADCHTTTKFISK 621
Query: 573 VMGREIILRDANRFHHFKDGLCSCRDYW 600
+ R II+RDA RFHHF+DG+CSC DYW
Sbjct: 622 ITTRRIIVRDATRFHHFEDGICSCNDYW 649
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 136/292 (46%), Gaps = 45/292 (15%)
Query: 2 PERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRD--SRIDD---A 56
P + + W +M+R Y EA +++ M EK + V +G + D S++ D A
Sbjct: 110 PNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGGLERDVFIGAGLVDMYSKMGDLKRA 169
Query: 57 RRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRID 116
R +FD MP++DVVA M+ G Q R +FD+M ++ +SW TM++GY +N
Sbjct: 170 REVFDKMPKRDVVAWNAMIAGLSQSEDPYVARRVFDQMVDQDDVSWGTMMAGYAHNGCFV 229
Query: 117 VARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAM----------------PMKS 160
+LF+ M N V+W ++ Y Q G ++A F M P +
Sbjct: 230 EVLELFDKMKLGN-VTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAA 288
Query: 161 VVAS-----------------------NSMILGLGQNGEVQKARVVFDQMREKDDATWSG 197
+A+ NS+I + G++ + +F++M KD +W+
Sbjct: 289 YLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEMDHKDTVSWNA 348
Query: 198 MIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQV 249
M+ Y G+ I LF+LMQ+ V+++ S +SVLS C ++ GR++
Sbjct: 349 MLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHAGLVEEGRKI 400
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 106/269 (39%), Gaps = 49/269 (18%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MP+R+VV+W AM+ G + A +F QM +++ VSW M+ G+ + + LF
Sbjct: 176 MPKRDVVAWNAMIAGLSQSEDPYVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELF 235
Query: 61 DMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEM------PK------------------ 96
D M +V ++ Y Q+G E F +M P
Sbjct: 236 DKMKLGNVTWNV-IIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFR 294
Query: 97 ---------------KNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYT 141
N + ++I Y ++D + KLF M K+ VSW AML GY
Sbjct: 295 EGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEMDHKDTVSWNAMLSGYA 354
Query: 142 QCGRIQDAWELFKAMPMKSV----VASNSMILGLGQNGEVQKARVVFDQMREK-----DD 192
G A LF M V V+ S++ G V++ R +F M +K D
Sbjct: 355 VHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHAGLVEEGRKIFHSMSDKYHIKPDL 414
Query: 193 ATWSGMIKVYERKGYELEVIDLFTLMQKE 221
++ M+ + R G E + +M E
Sbjct: 415 EHYACMVDLLGRAGLFDETLGFIKVMPVE 443
>gi|449448280|ref|XP_004141894.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Cucumis sativus]
gi|449513125|ref|XP_004164238.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Cucumis sativus]
Length = 645
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 219/558 (39%), Positives = 327/558 (58%), Gaps = 36/558 (6%)
Query: 78 YCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVM----PEKNEVSW 133
Y GR+D +F+ + NV S++ +I +V + D A + M E N ++
Sbjct: 89 YAALGRLDCSVFVFNTFDEPNVFSFSAIIHSHVQSRLFDRAFGYYSQMLSCGVEPNAFTF 148
Query: 134 TAMLMG-------------------------------YTQCGRIQDAWELFKAMPMKSVV 162
+++L Y + G + A +LF MP +S+V
Sbjct: 149 SSVLKSCSLESGKVLHCQAIKLGLGSDLYVRTGLVDVYARGGDVVCARQLFDKMPERSLV 208
Query: 163 ASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEG 222
+ +M+ + GE+ KAR +F+ M+E+D W+ MI Y + G E + LF M
Sbjct: 209 SLTTMLTCYSKMGELDKARSLFEGMKERDVVCWNVMIGGYAQSGVPNESLKLFRRMLVAK 268
Query: 223 VRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGK 282
N ++++VLS C L +L+ GR +H+ + ++V+V + LI MY KCG L +
Sbjct: 269 AIPNEVTVLAVLSACGQLGALESGRWIHSYIENKGIQINVHVGTALIDMYSKCGSLEDAR 328
Query: 283 LIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTG 342
L+FD KD+V WNS+I GYA +G + +L++F EM +G P D+T +G+LSAC + G
Sbjct: 329 LVFDRIRDKDVVAWNSMIVGYAMHGFSQHALQLFEEMTETGHKPTDITFIGILSACGHGG 388
Query: 343 KVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSL 402
V+EGR F M+ KY +EPK EHY CMV+LLGRAG +E+A L++ M D ++WG+L
Sbjct: 389 LVEEGRSFFRLMRDKYGIEPKIEHYGCMVNLLGRAGHLEEAYGLVKNMTIAADPVLWGTL 448
Query: 403 LGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVI 462
LG CR H+ + L E AK L+ + N+G Y+LLSN+YA+ G + VA++R M++ +
Sbjct: 449 LGCCRLHVNIKLGEEIAKFLVDQKLANSGTYVLLSNMYAATGNWEGVAKMRTLMKEHGIE 508
Query: 463 KPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDE 522
K GCS IEV+ KVH F + HP+ I ML +I L+ GY P + VLHD+ E
Sbjct: 509 KEHGCSSIEVDNKVHEFVAGE-RKHPKSKEIYVMLNEINSWLKARGYTPQTDVVLHDLRE 567
Query: 523 EEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRD 582
E+K SL HSEKLA+A+GL+ G ++++KNLRVC DCH+ +K+IS++ GR+I++RD
Sbjct: 568 EQKEQSLEVHSEKLAIAFGLISTKPGTTVKIVKNLRVCSDCHTVMKMISEITGRKIVMRD 627
Query: 583 ANRFHHFKDGLCSCRDYW 600
NRFHHF+DGLCSC DYW
Sbjct: 628 RNRFHHFEDGLCSCGDYW 645
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/344 (22%), Positives = 153/344 (44%), Gaps = 47/344 (13%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRL--- 59
E NV S++A++ +V+ + A + QM V ++ ++ + L
Sbjct: 107 EPNVFSFSAIIHSHVQSRLFDRAFGYYSQMLSCGVEPNAFTFSSVLKSCSLESGKVLHCQ 166
Query: 60 -FDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVA 118
+ D+ +T +V Y + G V R++FD+MP+++++S TTM++ Y +D A
Sbjct: 167 AIKLGLGSDLYVRTGLVDVYARGGDVVCARQLFDKMPERSLVSLTTMLTCYSKMGELDKA 226
Query: 119 RKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGL------- 171
R LFE M E++ V W M+ GY Q G ++ +LF+ M + + + +L +
Sbjct: 227 RSLFEGMKERDVVCWNVMIGGYAQSGVPNESLKLFRRMLVAKAIPNEVTVLAVLSACGQL 286
Query: 172 --------------------------------GQNGEVQKARVVFDQMREKDDATWSGMI 199
+ G ++ AR+VFD++R+KD W+ MI
Sbjct: 287 GALESGRWIHSYIENKGIQINVHVGTALIDMYSKCGSLEDARLVFDRIRDKDVVAWNSMI 346
Query: 200 KVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFD 259
Y G+ + LF M + G + + I +LS C ++ GR +L+R ++
Sbjct: 347 VGYAMHGFSQHALQLFEEMTETGHKPTDITFIGILSACGHGGLVEEGRSFF-RLMRDKYG 405
Query: 260 VDVYVA--SVLITMYIKCGELVKGKLIFDNFA-SKDIVMWNSII 300
++ + ++ + + G L + + N + D V+W +++
Sbjct: 406 IEPKIEHYGCMVNLLGRAGHLEEAYGLVKNMTIAADPVLWGTLL 449
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 108/202 (53%), Gaps = 12/202 (5%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MPER++VS T M+ Y + G + +A +LF M E++VV W VM+GG+ + +++ +LF
Sbjct: 202 MPERSLVSLTTMLTCYSKMGELDKARSLFEGMKERDVVCWNVMIGGYAQSGVPNESLKLF 261
Query: 61 -DMMPEKDVVAQTNM--VLGYC-QDGRVDEGREIFDEMPKK----NVISWTTMISGYVNN 112
M+ K + + + VL C Q G ++ GR I + K NV T +I Y
Sbjct: 262 RRMLVAKAIPNEVTVLAVLSACGQLGALESGRWIHSYIENKGIQINVHVGTALIDMYSKC 321
Query: 113 NRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGL- 171
++ AR +F+ + +K+ V+W +M++GY G Q A +LF+ M ++ +G+
Sbjct: 322 GSLEDARLVFDRIRDKDVVAWNSMIVGYAMHGFSQHALQLFEEMTETGHKPTDITFIGIL 381
Query: 172 ---GQNGEVQKARVVFDQMREK 190
G G V++ R F MR+K
Sbjct: 382 SACGHGGLVEEGRSFFRLMRDK 403
>gi|147805537|emb|CAN74095.1| hypothetical protein VITISV_023708 [Vitis vinifera]
Length = 906
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 242/690 (35%), Positives = 373/690 (54%), Gaps = 91/690 (13%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM------PEKNVVSWTVMLGGFIRDSRID 54
+PERNVVSW A+ YV+ EA LF++M P + +S V +RDS
Sbjct: 218 IPERNVVSWNALFSCYVQXDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRG 277
Query: 55 DARR--LFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISG---- 108
L + + D + +V Y + G + + +F+++ + +++SW +I+G
Sbjct: 278 KIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLH 337
Query: 109 ---------------------------------------YVNNNRIDVARKLFEVMPEKN 129
Y + ++ AR F ++PEK+
Sbjct: 338 EHHEQALELLGQMKRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKD 397
Query: 130 EVSWTAMLMGYTQCGRIQDAWELFKAM----------PMKSVVAS--------------- 164
++W A++ GY+Q +A LF M + +++ S
Sbjct: 398 LIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHG 457
Query: 165 --------------NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELE 210
NS+I G+ V+ A +F++ D +++ MI Y + G E
Sbjct: 458 LSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEE 517
Query: 211 VIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLIT 270
+ LF MQ ++ + S+L+ CA+L++ + G+Q+H +++ F +D++ + L+
Sbjct: 518 ALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVN 577
Query: 271 MYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVT 330
MY KCG + F + IV W+++I G AQ+G G ++L++F++M GV P+ +T
Sbjct: 578 MYAKCGSIDDAGRAFSELTERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHIT 637
Query: 331 LVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAM 390
LV VL AC++ G V E + FESM+ + +P EHYACM+DLLGRAG++ +A++L+ M
Sbjct: 638 LVSVLGACNHAGLVTEAKLYFESMEELFGFKPMQEHYACMIDLLGRAGKINEAVELVNKM 697
Query: 391 PFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVA 450
PFE +A +WG+LLGA R H ++L AA+ L LEP+ +G ++LL+NIYAS G++ +VA
Sbjct: 698 PFEANASVWGALLGAARIHKDVELGRRAAEMLFILEPEKSGTHVLLANIYASAGKWENVA 757
Query: 451 ELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYC 510
E+R+ MR V K PG SWIEV+ KV+ F D SH I L+++ L+ +AGY
Sbjct: 758 EVRRLMRDSKVKKEPGMSWIEVKDKVYTFLVGD-RSHYRSQEIYAKLDELSDLMDKAGYV 816
Query: 511 PDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLI 570
P LHDV++ EK L +HSEKLAVA+GL+ P+G PIRV KNLRVC DCH+A K I
Sbjct: 817 PMVEIDLHDVEQSEKELLLYHHSEKLAVAFGLIATPQGAPIRVKKNLRVCVDCHTAFKYI 876
Query: 571 SKVMGREIILRDANRFHHFKDGLCSCRDYW 600
K++ REII+RD NRFHHFKDG CSC DYW
Sbjct: 877 CKIVSREIIVRDINRFHHFKDGSCSCGDYW 906
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 120/498 (24%), Positives = 218/498 (43%), Gaps = 94/498 (18%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMP----EKNVVSWTVMLGG--FIRDSRIDDA 56
E ++VSW+A++ GY + G+ A F +M + N +++ +L ++D RI
Sbjct: 119 EPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQ 178
Query: 57 RRLFDMMP--EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNR 114
++ E DV +V+ Y + + + +FDE+P++NV+SW + S YV +
Sbjct: 179 VHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQXDF 238
Query: 115 IDVARKLFEVMP----EKNEVSWTAMLMG------------------------------- 139
A LF M + NE S ++M+
Sbjct: 239 CGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANA 298
Query: 140 ----YTQCGRIQDAWELFKAMPMKSVVASNSMILG-------------LGQNGE------ 176
Y + G + DA +F+ + +V+ N++I G LGQ
Sbjct: 299 LVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRQLHSSL 358
Query: 177 ------------------------VQKARVVFDQMREKDDATWSGMIKVYERKGYELEVI 212
++ AR+ F+ + EKD W+ +I Y + ++E +
Sbjct: 359 MKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEAL 418
Query: 213 DLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMY 272
LF M KEG+ N +L ++L A L + RQVH V+ F D+YV + LI Y
Sbjct: 419 SLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSY 478
Query: 273 IKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLV 332
KC + + IF+ D+V + S+I+ YAQYG GE++LK+F EM + PD
Sbjct: 479 GKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCS 538
Query: 333 GVLSACSYTGKVKEGREI-FESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMP 391
+L+AC+ ++G+++ +K ++++ + +V++ + G ++DA + +
Sbjct: 539 SLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGN--SLVNMYAKCGSIDDAGRAFSELT 596
Query: 392 FEPDAIIWGSLLGACRTH 409
E + W +++G H
Sbjct: 597 -ERGIVSWSAMIGGLAQH 613
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 73/235 (31%), Positives = 124/235 (52%), Gaps = 12/235 (5%)
Query: 180 ARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCAS 239
AR + D+ E D +WS +I Y + G + F M GV+ N + SVL C+
Sbjct: 110 ARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSI 169
Query: 240 LASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSI 299
+ L G+QVH +V F+ DV+VA+ L+ MY KC E + K +FD +++V WN++
Sbjct: 170 VKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNAL 229
Query: 300 ISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSAC-----SYTGKVKEGREIFESM 354
S Y Q +++ +F+EM SG+ P++ +L +++AC S GK+ G I
Sbjct: 230 FSCYVQXDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLI---- 285
Query: 355 KSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTH 409
K Y +P + + +VD+ + G + DA+ + E + +PD + W +++ C H
Sbjct: 286 KLGYDWDPFSAN--ALVDMYAKVGDLADAISVFEKIK-QPDIVSWNAVIAGCVLH 337
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 142/290 (48%), Gaps = 16/290 (5%)
Query: 87 GREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMP----EKNEVSWTAMLMGYTQ 142
R++ DE + +++SW+ +ISGY N A F M + NE +++++L +
Sbjct: 110 ARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSI 169
Query: 143 CGRIQDAWELFKAMPMKS----VVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGM 198
++ ++ + + V +N++++ + E ++ +FD++ E++ +W+ +
Sbjct: 170 VKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNAL 229
Query: 199 IKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQF 258
Y + + E + LF M G++ N SL S+++ C L G+ +H L++ +
Sbjct: 230 FSCYVQXDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGY 289
Query: 259 DVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHE 318
D D + A+ L+ MY K G+L +F+ DIV WN++I+G + E++L++ +
Sbjct: 290 DWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQ 349
Query: 319 M---FSSGVMPDDV-----TLVGVLSACSYTGKVKEGREIFESMKSKYLV 360
M S +M D+ VG++ S +++ R F + K L+
Sbjct: 350 MKRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLI 399
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 90/190 (47%), Gaps = 2/190 (1%)
Query: 214 LFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYI 273
+ L+ K S +LS C + SL G Q+HA + + D + + LI +Y
Sbjct: 43 ILNLIDKGNFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYS 102
Query: 274 KCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVG 333
KC + + D + D+V W+++ISGYAQ GLG +L FHEM GV ++ T
Sbjct: 103 KCRXFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSS 162
Query: 334 VLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFE 393
VL ACS ++ G+++ + E +V + + + D+ +L + +P E
Sbjct: 163 VLKACSIVKDLRIGKQVHGVVVVSGF-EGDVFVANTLVVMYAKCDEFLDSKRLFDEIP-E 220
Query: 394 PDAIIWGSLL 403
+ + W +L
Sbjct: 221 RNVVSWNALF 230
>gi|356519952|ref|XP_003528632.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 693
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 235/613 (38%), Positives = 354/613 (57%), Gaps = 16/613 (2%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
M +R+V SW ++ Y + GM+ +F QMP ++ VS+ ++ F + A ++
Sbjct: 84 MTKRDVYSWNTLLSAYAKMGMVENLHVVFDQMPYRDSVSYNTLIACFASNGHSGKALKVL 143
Query: 61 DMMPEKDV----VAQTNMVLGYCQDGRVDEGREIFDEMP----KKNVISWTTMISGYVNN 112
M E + N + Q + G++I + +N M Y
Sbjct: 144 VRMQEDGFQPTQYSHVNALQACSQLLDLRHGKQIHGRIVVADLGENTFVRNAMTDMYAKC 203
Query: 113 NRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMK----SVVASNSMI 168
ID AR LF+ M +KN VSW M+ GY + G + LF M + +V ++++
Sbjct: 204 GDIDKARLLFDGMIDKNVVSWNLMISGYVKMGNPNECIHLFNEMQLSGLKPDLVTVSNVL 263
Query: 169 LGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFP 228
+ G V AR +F ++ +KD+ W+ MI Y + G E + LF M + V+ +
Sbjct: 264 NAYFRCGRVDDARNLFIKLPKKDEICWTTMIVGYAQNGREEDAWMLFGDMLRRNVKPDSY 323
Query: 229 SLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNF 288
++ S++S CA LASL HG+ VH ++V D + V+S L+ MY KCG + ++IF+
Sbjct: 324 TISSMVSSCAKLASLYHGQVVHGKVVVMGIDNSMLVSSALVDMYCKCGVTLDARVIFETM 383
Query: 289 ASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGR 348
++++ WN++I GYAQ G ++L ++ M PD++T VGVLSAC VKEG+
Sbjct: 384 PIRNVITWNAMILGYAQNGQVLEALTLYERMQQENFKPDNITFVGVLSACINADMVKEGQ 443
Query: 349 EIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRT 408
+ F+S+ S++ + P +HYACM+ LLGR+G V+ A+ LI+ MP EP+ IW +LL C
Sbjct: 444 KYFDSI-SEHGIAPTLDHYACMITLLGRSGSVDKAVDLIQGMPHEPNYRIWSTLLSVC-A 501
Query: 409 HMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCS 468
L AE+AA L +L+P+NAGPYI+LSN+YA+ GR+ DVA +R M+++N K S
Sbjct: 502 KGDLKNAELAASHLFELDPRNAGPYIMLSNLYAACGRWKDVAVVRSLMKEKNAKKFAAYS 561
Query: 469 WIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHS 528
W+EV KVH F D HPE I L ++ +L++ GY PD++ VLH+V EEEK S
Sbjct: 562 WVEVGNKVHRFVSEDHY-HPEVGKIYGELNRLISILQQIGYNPDTNIVLHNVGEEEKFRS 620
Query: 529 LRYHSEKLAVAYGLVKLPEGV-PIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFH 587
+ YHSEKLA+A+ L++ P GV PIR++KN+RVC DCH +K S + R II+RD+NRFH
Sbjct: 621 ISYHSEKLALAFALIRKPNGVAPIRIIKNIRVCDDCHVFMKFASITISRPIIMRDSNRFH 680
Query: 588 HFKDGLCSCRDYW 600
HF G CSC D W
Sbjct: 681 HFFGGKCSCNDNW 693
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 97/350 (27%), Positives = 174/350 (49%), Gaps = 19/350 (5%)
Query: 122 FEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKAR 181
+ K+ +L Y + G++ DA +F M + V + N+++ + G V+
Sbjct: 50 LNLFQPKDSFIHNQLLHLYAKFGKLSDAQNVFDNMTKRDVYSWNTLLSAYAKMGMVENLH 109
Query: 182 VVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLA 241
VVFDQM +D +++ +I + G+ + + + MQ++G + S ++ L C+ L
Sbjct: 110 VVFDQMPYRDSVSYNTLIACFASNGHSGKALKVLVRMQEDGFQPTQYSHVNALQACSQLL 169
Query: 242 SLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIIS 301
L HG+Q+H ++V + +V + + MY KCG++ K +L+FD K++V WN +IS
Sbjct: 170 DLRHGKQIHGRIVVADLGENTFVRNAMTDMYAKCGDIDKARLLFDGMIDKNVVSWNLMIS 229
Query: 302 GYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVE 361
GY + G + + +F+EM SG+ PD VT+ VL+A G+V + R +F +
Sbjct: 230 GYVKMGNPNECIHLFNEMQLSGLKPDLVTVSNVLNAYFRCGRVDDARNLFIKL------- 282
Query: 362 PKTEHYACMVDLLGRA--GQVEDAMKLIEAM---PFEPDAIIWGSLLGACRTHMKLDLAE 416
PK + ++G A G+ EDA L M +PD+ S++ +C L +
Sbjct: 283 PKKDEICWTTMIVGYAQNGREEDAWMLFGDMLRRNVKPDSYTISSMVSSCAKLASLYHGQ 342
Query: 417 VAAKKLLQLEPKNAGPYILLS----NIYASQGRFHDVAELRKNMRKRNVI 462
V K++ + N+ +L+S ++Y G D + + M RNVI
Sbjct: 343 VVHGKVVVMGIDNS---MLVSSALVDMYCKCGVTLDARVIFETMPIRNVI 389
>gi|113205417|gb|AAU90328.2| Pentatricopeptide repeat domain containing protein, putative
[Solanum demissum]
Length = 819
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 240/718 (33%), Positives = 374/718 (52%), Gaps = 119/718 (16%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV----VSWTVMLGGF--------- 47
M RN VSWT M+ GY + EA L+ +M V +++ +L GF
Sbjct: 103 MFSRNEVSWTIMIGGYSQNNQPKEAFNLYTEMCRSGVKPDHITFATLLSGFDDTTTLKEV 162
Query: 48 -------IR--------------DSR-----IDDARRLFDMMPEKDVVAQTNMVLGYCQD 81
IR DS +D A +LF MP KD V+ M+ GY +
Sbjct: 163 LQIHSHIIRFGFSASLIVFNSLVDSYCKTCCLDIASQLFSEMPTKDSVSFNVMITGYTKY 222
Query: 82 GRVDEGREIFDEMPK----------------------------------KNVISWTTMIS 107
G +E ++F +M K W ++
Sbjct: 223 GFREEALKLFMQMRNMDFQPSGFTFAAMLGMSVGSEDVIFGQQIHGLAIKTSYVWDIFVA 282
Query: 108 G-----YVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSV- 161
Y ++ ID+A+ LF+ MPE + VS+ ++ GY G+ + +++LFK + S
Sbjct: 283 NALLDFYSKHDYIDLAKNLFDEMPELDGVSYNIIITGYAWNGQYEKSFDLFKRLQGTSFD 342
Query: 162 -----------VASNSMILGLGQNGEVQK---------------------------ARVV 183
VA+ + L +G+ Q A +
Sbjct: 343 RKNFPFATMLSVAAIELNLSMGRQTHAQAVVTTAVSEVQVGNALVDMYAKCEKFEDANRI 402
Query: 184 FDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASL 243
F + ++ W+ +I +Y +KG+ E + +F M +E V + + S L A+LAS+
Sbjct: 403 FANLAYRNSVPWTAIISIYVQKGFHEEALKMFKEMNRENVHGDQATFASTLKASANLASV 462
Query: 244 DHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGY 303
G+Q+H+ ++R V+ SVL+ MY CG + +F ++IV WN++IS Y
Sbjct: 463 SLGKQLHSSVIRLGLLSSVFSGSVLVDMYANCGSMKDAIEVFKEMPDRNIVCWNALISAY 522
Query: 304 AQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPK 363
+Q G E + F +M SG+ PD V+ + VL+ACS+ G V++ F SM Y ++P+
Sbjct: 523 SQNGDAEATFSSFADMIESGLYPDSVSFLSVLTACSHRGLVEKALWYFNSMTQVYKLDPR 582
Query: 364 TEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLL 423
+HYA M+D+L R+G+ +A LI MPFEPD ++W S+L +CR H DLA+ AA +L
Sbjct: 583 RKHYATMIDVLCRSGRFNEAENLISEMPFEPDEVMWSSVLNSCRIHKNQDLAKKAADQLF 642
Query: 424 QLEP-KNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGR 482
+++ ++A Y+ +SNIYA G++ + A+++K MR+R V K SW+E++ +VH+FT
Sbjct: 643 KMDALRDAAAYVNMSNIYAEAGKWENAAKVKKAMRERGVKKVTAYSWVEIDHRVHVFTAN 702
Query: 483 DCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGL 542
D +HP+ I R + + L+ + GY PD+S L +VDEE K+ SL+YHSE+LA+A+ L
Sbjct: 703 D-RTHPQTEQIRRKINSLVELMDKEGYKPDTSCTLQNVDEEMKIESLKYHSERLAIAFAL 761
Query: 543 VKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
+ PEG PI +MKNLR C DCH+AIK+ISK++GREI +RD++RFHHF+DG CSC DYW
Sbjct: 762 INTPEGSPIIIMKNLRACVDCHAAIKVISKIVGREITVRDSSRFHHFRDGSCSCGDYW 819
Score = 171 bits (433), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 129/455 (28%), Positives = 213/455 (46%), Gaps = 55/455 (12%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MP RN S MV GYV+ + A LF M +N VSWT+M+GG+ ++++ +A L+
Sbjct: 72 MPYRNTSSVNMMVSGYVKSRNLFRARELFESMFSRNEVSWTIMIGGYSQNNQPKEAFNLY 131
Query: 61 DMM----PEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPK----KNVISWTTMISGYVNN 112
M + D + ++ G+ + E +I + + ++I + +++ Y
Sbjct: 132 TEMCRSGVKPDHITFATLLSGFDDTTTLKEVLQIHSHIIRFGFSASLIVFNSLVDSYCKT 191
Query: 113 NRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSV----------- 161
+D+A +LF MP K+ VS+ M+ GYT+ G ++A +LF M M+++
Sbjct: 192 CCLDIASQLFSEMPTKDSVSFNVMITGYTKYGFREEALKLF--MQMRNMDFQPSGFTFAA 249
Query: 162 -----VASNSMILGLGQNGEVQK-------------------------ARVVFDQMREKD 191
V S +I G +G K A+ +FD+M E D
Sbjct: 250 MLGMSVGSEDVIFGQQIHGLAIKTSYVWDIFVANALLDFYSKHDYIDLAKNLFDEMPELD 309
Query: 192 DATWSGMIKVYERKGYELEVIDLFTLMQKEGV-RVNFPSLISVLSVCASLASLDHGRQVH 250
+++ +I Y G + DLF +Q R NFP ++LSV A +L GRQ H
Sbjct: 310 GVSYNIIITGYAWNGQYEKSFDLFKRLQGTSFDRKNFP-FATMLSVAAIELNLSMGRQTH 368
Query: 251 AQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGE 310
AQ V +V V + L+ MY KC + IF N A ++ V W +IIS Y Q G E
Sbjct: 369 AQAVVTTAVSEVQVGNALVDMYAKCEKFEDANRIFANLAYRNSVPWTAIISIYVQKGFHE 428
Query: 311 KSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACM 370
++LK+F EM V D T L A + V G+++ S+ L+ + +
Sbjct: 429 EALKMFKEMNRENVHGDQATFASTLKASANLASVSLGKQLHSSVIRLGLLSSVFSG-SVL 487
Query: 371 VDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
VD+ G ++DA+++ + MP + + + W +L+ A
Sbjct: 488 VDMYANCGSMKDAIEVFKEMP-DRNIVCWNALISA 521
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/363 (23%), Positives = 169/363 (46%), Gaps = 43/363 (11%)
Query: 82 GRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYT 141
++ + R++FDEMP +N S M+SGYV + + AR+LFE M +NEVSWT M+ GY+
Sbjct: 60 NQIAKARQLFDEMPYRNTSSVNMMVSGYVKSRNLFRARELFESMFSRNEVSWTIMIGGYS 119
Query: 142 QCGRIQDAWELFKAM-----------------------PMKSVVASNSMILGLGQNGEV- 177
Q + ++A+ L+ M +K V+ +S I+ G + +
Sbjct: 120 QNNQPKEAFNLYTEMCRSGVKPDHITFATLLSGFDDTTTLKEVLQIHSHIIRFGFSASLI 179
Query: 178 ---------------QKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEG 222
A +F +M KD +++ MI Y + G+ E + LF M+
Sbjct: 180 VFNSLVDSYCKTCCLDIASQLFSEMPTKDSVSFNVMITGYTKYGFREEALKLFMQMRNMD 239
Query: 223 VRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGK 282
+ + + ++L + + G+Q+H ++ + D++VA+ L+ Y K + K
Sbjct: 240 FQPSGFTFAAMLGMSVGSEDVIFGQQIHGLAIKTSYVWDIFVANALLDFYSKHDYIDLAK 299
Query: 283 LIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTG 342
+FD D V +N II+GYA G EKS +F + + + +LS +
Sbjct: 300 NLFDEMPELDGVSYNIIITGYAWNGQYEKSFDLFKRLQGTSFDRKNFPFATMLSVAAIEL 359
Query: 343 KVKEGREIF-ESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGS 401
+ GR+ +++ + + E + + +VD+ + + EDA ++ + + +++ W +
Sbjct: 360 NLSMGRQTHAQAVVTTAVSEVQVGN--ALVDMYAKCEKFEDANRIFANLAYR-NSVPWTA 416
Query: 402 LLG 404
++
Sbjct: 417 IIS 419
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/375 (22%), Positives = 162/375 (43%), Gaps = 44/375 (11%)
Query: 142 QCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKV 201
+ +I A +LF MP ++ + N M+ G ++ + +AR +F+ M +++ +W+ MI
Sbjct: 58 RANQIAKARQLFDEMPYRNTSSVNMMVSGYVKSRNLFRARELFESMFSRNEVSWTIMIGG 117
Query: 202 YERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVD 261
Y + E +L+T M + GV+ + + ++LS +L Q+H+ ++R F
Sbjct: 118 YSQNNQPKEAFNLYTEMCRSGVKPDHITFATLLSGFDDTTTLKEVLQIHSHIIRFGFSAS 177
Query: 262 VYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFS 321
+ V + L+ Y K L +F +KD V +N +I+GY +YG E++LK+F +M +
Sbjct: 178 LIVFNSLVDSYCKTCCLDIASQLFSEMPTKDSVSFNVMITGYTKYGFREEALKLFMQMRN 237
Query: 322 SGVMPDDVTLVGVLSACSYTGKVKEGREIFE-SMKSKY---------LVEPKTEH----- 366
P T +L + V G++I ++K+ Y L++ ++H
Sbjct: 238 MDFQPSGFTFAAMLGMSVGSEDVIFGQQIHGLAIKTSYVWDIFVANALLDFYSKHDYIDL 297
Query: 367 ---------------YACMVDLLGRAGQVE---DAMKLIEAMPFEPDAIIWGSLLGACRT 408
Y ++ GQ E D K ++ F+ + ++L
Sbjct: 298 AKNLFDEMPELDGVSYNIIITGYAWNGQYEKSFDLFKRLQGTSFDRKNFPFATMLSVAAI 357
Query: 409 HMKLDLAE------VAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVI 462
+ L + V + +++ NA L ++YA +F D + N+ RN +
Sbjct: 358 ELNLSMGRQTHAQAVVTTAVSEVQVGNA-----LVDMYAKCEKFEDANRIFANLAYRNSV 412
Query: 463 KPPGCSWIEVEKKVH 477
I V+K H
Sbjct: 413 PWTAIISIYVQKGFH 427
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/215 (20%), Positives = 90/215 (41%), Gaps = 36/215 (16%)
Query: 249 VHAQLVRCQFDVDV-------------------------------YVASVLITMYIKCGE 277
V A++V+ FD ++ +++++ Y+K
Sbjct: 33 VDARIVKTGFDPEISRFNFKLKDLVRANQIAKARQLFDEMPYRNTSSVNMMVSGYVKSRN 92
Query: 278 LVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSA 337
L + + +F++ S++ V W +I GY+Q +++ ++ EM SGV PD +T +LS
Sbjct: 93 LFRARELFESMFSRNEVSWTIMIGGYSQNNQPKEAFNLYTEMCRSGVKPDHITFATLLSG 152
Query: 338 CSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAI 397
T +KE +I S ++ + +VD + ++ A +L MP D++
Sbjct: 153 FDDTTTLKEVLQI-HSHIIRFGFSASLIVFNSLVDSYCKTCCLDIASQLFSEMP-TKDSV 210
Query: 398 IWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGP 432
+ ++ + K E A K +Q+ + P
Sbjct: 211 SFNVMITG---YTKYGFREEALKLFMQMRNMDFQP 242
>gi|356532382|ref|XP_003534752.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09410-like [Glycine max]
Length = 669
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 219/515 (42%), Positives = 328/515 (63%), Gaps = 6/515 (1%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
M +RN SWT+++ GY G I EA LF QMPE+NVVSWT+++ GF R+ +D A R F
Sbjct: 153 MTQRNAFSWTSLISGYFSCGKIEEALHLFDQMPERNVVSWTMVVLGFARNGLMDHAGRFF 212
Query: 61 DMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARK 120
+MPEK+++A T MV Y +G E ++F EMP++NV SW MISG + NR+D A
Sbjct: 213 YLMPEKNIIAWTAMVKAYLDNGCFSEAYKLFLEMPERNVRSWNIMISGCLRANRVDEAIG 272
Query: 121 LFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKA 180
LFE MP++N VSWTAM+ G Q I A + F MP K + A +MI G + +A
Sbjct: 273 LFESMPDRNHVSWTAMVSGLAQNKMIGIARKYFDLMPYKDMAAWTAMITACVDEGLMDEA 332
Query: 181 RVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASL 240
R +FDQ+ EK+ +W+ MI Y R Y E ++LF LM + R N ++ SV++ C +
Sbjct: 333 RKLFDQIPEKNVGSWNTMIDGYARNSYVGEALNLFVLMLRSCFRPNETTMTSVVTSCDGM 392
Query: 241 ASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSII 300
L Q HA ++ F+ + ++ + LIT+Y K G+L +L+F+ SKD+V W ++I
Sbjct: 393 VEL---MQAHAMVIHLGFEHNTWLTNALITLYSKSGDLCSARLVFEQLKSKDVVSWTAMI 449
Query: 301 SGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLV 360
Y+ +G G +L+VF M SG+ PD+VT VG+LSACS+ G V +GR +F+S+K Y +
Sbjct: 450 VAYSNHGHGHHALQVFARMLVSGIKPDEVTFVGLLSACSHVGLVHQGRRLFDSIKGTYNL 509
Query: 361 EPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEP-DAIIWGSLLGACRTHMKLDLAEVAA 419
PK EHY+C+VD+LGRAG V++AM ++ +P D + +LLGACR H + +A
Sbjct: 510 TPKAEHYSCLVDILGRAGLVDEAMDVVATIPPSARDEAVLVALLGACRLHGDVAIANSIG 569
Query: 420 KKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMF 479
+KLL+LEP ++G Y+LL+N YA++G++ + A++RK MR+RNV + PG S I++ K H+F
Sbjct: 570 EKLLELEPSSSGGYVLLANTYAAEGQWDEFAKVRKRMRERNVKRIPGYSQIQITGKNHVF 629
Query: 480 TGRDCVSHPEHPMIMRMLEK-IGGLLREAGYCPDS 513
+ SHP+ I R+L++ + L+RE G P++
Sbjct: 630 VVGE-RSHPQIEEIYRLLQQNLQPLMREMGSTPEN 663
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 119/433 (27%), Positives = 217/433 (50%), Gaps = 57/433 (13%)
Query: 19 EGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGY 78
G + EA LF +MP+++ VS+ M+ ++++ + +A +F MP+++VVA++ M+ GY
Sbjct: 78 HGKLDEARKLFDEMPQRDDVSYNSMIAVYLKNKDLLEAETVFKEMPQRNVVAESAMIDGY 137
Query: 79 CQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLM 138
+ GR+D+ R++FD M ++N SWT++ISGY + +I+ A LF+ MPE+N VSWT +++
Sbjct: 138 AKVGRLDDARKVFDNMTQRNAFSWTSLISGYFSCGKIEEALHLFDQMPERNVVSWTMVVL 197
Query: 139 GYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGM 198
G+ + G + A F MP K+++A +M+ NG +A +F +M E++ +W+ M
Sbjct: 198 GFARNGLMDHAGRFFYLMPEKNIIAWTAMVKAYLDNGCFSEAYKLFLEMPERNVRSWNIM 257
Query: 199 IKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQF 258
I R E I LF M V++ +++S L+ + + R F
Sbjct: 258 ISGCLRANRVDEAIGLFESMPDRN-HVSWTAMVSGLAQNKMIG-----------IARKYF 305
Query: 259 DV----DVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLK 314
D+ D+ + +IT + G + + + +FD K++ WN++I GYA+ ++L
Sbjct: 306 DLMPYKDMAAWTAMITACVDEGLMDEARKLFDQIPEKNVGSWNTMIDGYARNSYVGEALN 365
Query: 315 VFHEMFSSGVMPDDVTLVGVLSAC--------------------------------SYTG 342
+F M S P++ T+ V+++C S +G
Sbjct: 366 LFVLMLRSCFRPNETTMTSVVTSCDGMVELMQAHAMVIHLGFEHNTWLTNALITLYSKSG 425
Query: 343 KVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAM---PFEPDAIIW 399
+ R +FE +KSK +V + M+ G A+++ M +PD + +
Sbjct: 426 DLCSARLVFEQLKSKDVVS-----WTAMIVAYSNHGHGHHALQVFARMLVSGIKPDEVTF 480
Query: 400 GSLLGACRTHMKL 412
LL AC +H+ L
Sbjct: 481 VGLLSAC-SHVGL 492
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 138/305 (45%), Gaps = 46/305 (15%)
Query: 165 NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVR 224
N I LG++G++ +AR +FD+M ++DD +++ MI VY + LE +F KE +
Sbjct: 69 NVEITILGRHGKLDEARKLFDEMPQRDDVSYNSMIAVYLKNKDLLEAETVF----KEMPQ 124
Query: 225 VNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLI 284
N + +++ A + LD R+V + + + + + LI+ Y CG++ + +
Sbjct: 125 RNVVAESAMIDGYAKVGRLDDARKVFDNMTQ----RNAFSWTSLISGYFSCGKIEEALHL 180
Query: 285 FDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEM---------------FSSGVMPDDV 329
FD +++V W ++ G+A+ GL + + + F+ M +G +
Sbjct: 181 FDQMPERNVVSWTMVVLGFARNGLMDHAGRFFYLMPEKNIIAWTAMVKAYLDNGCFSEAY 240
Query: 330 TLVG------------VLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRA 377
L ++S C +V E +FESM + V + MV L +
Sbjct: 241 KLFLEMPERNVRSWNIMISGCLRANRVDEAIGLFESMPDRNHVS-----WTAMVSGLAQN 295
Query: 378 GQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLL-QLEPKNAGPYILL 436
+ A K + MP++ D W +++ AC +D A+KL Q+ KN G + +
Sbjct: 296 KMIGIARKYFDLMPYK-DMAAWTAMITACVDEGLMD----EARKLFDQIPEKNVGSWNTM 350
Query: 437 SNIYA 441
+ YA
Sbjct: 351 IDGYA 355
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 94/204 (46%), Gaps = 15/204 (7%)
Query: 259 DVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHE 318
D ++ +V IT+ + G+L + + +FD +D V +NS+I+ Y + ++ VF E
Sbjct: 62 DDALHKRNVEITILGRHGKLDEARKLFDEMPQRDDVSYNSMIAVYLKNKDLLEAETVFKE 121
Query: 319 MFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAG 378
M V+ + + G + G++ + R++F++M + + ++ G
Sbjct: 122 MPQRNVVAESAMIDGY----AKVGRLDDARKVFDNMTQR-----NAFSWTSLISGYFSCG 172
Query: 379 QVEDAMKLIEAMPFEPDAIIWG-SLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLS 437
++E+A+ L + MP E + + W +LG R L + A + + KN + +
Sbjct: 173 KIEEALHLFDQMP-ERNVVSWTMVVLGFARN----GLMDHAGRFFYLMPEKNIIAWTAMV 227
Query: 438 NIYASQGRFHDVAELRKNMRKRNV 461
Y G F + +L M +RNV
Sbjct: 228 KAYLDNGCFSEAYKLFLEMPERNV 251
>gi|242045096|ref|XP_002460419.1| hypothetical protein SORBIDRAFT_02g027830 [Sorghum bicolor]
gi|241923796|gb|EER96940.1| hypothetical protein SORBIDRAFT_02g027830 [Sorghum bicolor]
Length = 635
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 205/535 (38%), Positives = 329/535 (61%), Gaps = 18/535 (3%)
Query: 78 YCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPE-------KNE 130
YC+ G V + R +FD +P ++V+SWT +I+GY N D+ + ++P+ +
Sbjct: 107 YCKCGAVSDARHVFDGIPTRDVVSWTYLITGYAQN---DMPAEALGLLPDMLRARFRPSG 163
Query: 131 VSWTAMLMGYTQCGRIQDAWELFKAMPMK-----SVVASNSMILGLGQNGEVQKARVVFD 185
++T+ L CG + E A+ +K V ++++ + ++ A VFD
Sbjct: 164 FTFTSFLKAAGACGG-RGIGEQMHALAVKYNLDEDVYVGSALLDMYARCQQMDMAIRVFD 222
Query: 186 QMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDH 245
+ K++ +W+ +I + RKG + F MQ+ G + SV S A + +L+
Sbjct: 223 WLDSKNEVSWNALIAGFARKGDGETTLMKFAEMQRNGFGATHFTYSSVFSALARIGALEQ 282
Query: 246 GRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQ 305
GR VHA +++ + +VA+ ++ MY K G +V + +FD +D+V WN++++ +AQ
Sbjct: 283 GRWVHAHMIKSGQKLTAFVANTILGMYAKSGSMVDARKVFDRVDQRDLVTWNTMLTAFAQ 342
Query: 306 YGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTE 365
YGLG++++ F E+ G+ + +T + VL+ACS+ G VKEG++ F+ MK Y VEP+ +
Sbjct: 343 YGLGKEAVAHFEEIRKYGIQLNQITFLSVLTACSHGGLVKEGKQYFDMMKD-YNVEPEID 401
Query: 366 HYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQL 425
HY VDLLGRAG +++A+ + MP EP A +WG+LLGACR H + + AA + +L
Sbjct: 402 HYVSFVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALLGACRMHKNAKIGQYAADHVFEL 461
Query: 426 EPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCV 485
+P++ GP +LL NIYAS G++ D A +RK M+ V K P CSW+E+E VHMF D
Sbjct: 462 DPEDTGPPVLLYNIYASTGQWDDAARVRKMMKATGVKKEPACSWVEIENSVHMFVADDS- 520
Query: 486 SHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKL 545
+HP+ I RM E++ +++AGY P++ +VL + E+E+ L+YHSEK+A+A+ L+ +
Sbjct: 521 THPKSEEIYRMWEEVNTRIKKAGYVPNTDYVLLHIKEQERETKLQYHSEKIALAFALINM 580
Query: 546 PEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
P G IR+MKN+R+CGDCHSA + +S+V REI++RD NRFHHF +G CSC DYW
Sbjct: 581 PAGATIRIMKNIRICGDCHSAFRYVSEVFKREIVVRDTNRFHHFSNGSCSCGDYW 635
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 119/242 (49%), Gaps = 4/242 (1%)
Query: 165 NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVR 224
NS+I + G V AR VFD + +D +W+ +I Y + E + L M + R
Sbjct: 101 NSLIHMYCKCGAVSDARHVFDGIPTRDVVSWTYLITGYAQNDMPAEALGLLPDMLRARFR 160
Query: 225 VNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLI 284
+ + S L + G Q+HA V+ D DVYV S L+ MY +C ++ +
Sbjct: 161 PSGFTFTSFLKAAGACGGRGIGEQMHALAVKYNLDEDVYVGSALLDMYARCQQMDMAIRV 220
Query: 285 FDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKV 344
FD SK+ V WN++I+G+A+ G GE +L F EM +G T V SA + G +
Sbjct: 221 FDWLDSKNEVSWNALIAGFARKGDGETTLMKFAEMQRNGFGATHFTYSSVFSALARIGAL 280
Query: 345 KEGREIFESM-KSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
++GR + M KS + + ++ + ++G + DA K+ + + + D + W ++L
Sbjct: 281 EQGRWVHAHMIKSGQKLTAFVAN--TILGMYAKSGSMVDARKVFDRVD-QRDLVTWNTML 337
Query: 404 GA 405
A
Sbjct: 338 TA 339
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 67/303 (22%), Positives = 138/303 (45%), Gaps = 21/303 (6%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
+P R+VVSWT ++ GY + M EA L M F++ + R +
Sbjct: 123 IPTRDVVSWTYLITGYAQNDMPAEALGLLPDMLRARFRPSGFTFTSFLKAAGACGGRGIG 182
Query: 61 DMMP--------EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+ M ++DV + ++ Y + ++D +FD + KN +SW +I+G+
Sbjct: 183 EQMHALAVKYNLDEDVYVGSALLDMYARCQQMDMAIRVFDWLDSKNEVSWNALIAGFARK 242
Query: 113 NRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRI-QDAW---ELFKAMPMKSVVAS 164
+ F M +++++ + G + Q W + K+ + +
Sbjct: 243 GDGETTLMKFAEMQRNGFGATHFTYSSVFSALARIGALEQGRWVHAHMIKSGQKLTAFVA 302
Query: 165 NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVR 224
N+++ ++G + AR VFD++ ++D TW+ M+ + + G E + F ++K G++
Sbjct: 303 NTILGMYAKSGSMVDARKVFDRVDQRDLVTWNTMLTAFAQYGLGKEAVAHFEEIRKYGIQ 362
Query: 225 VNFPSLISVLSVCASLASLDHGRQVHAQL--VRCQFDVDVYVASVLITMYIKCGELVKGK 282
+N + +SVL+ C+ + G+Q + + ++D YV+ + + + G L+K
Sbjct: 363 LNQITFLSVLTACSHGGLVKEGKQYFDMMKDYNVEPEIDHYVS--FVDLLGRAG-LLKEA 419
Query: 283 LIF 285
LIF
Sbjct: 420 LIF 422
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 88/177 (49%), Gaps = 8/177 (4%)
Query: 232 SVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASK 291
S+++ CA +L R +H+ L R + D ++ + LI MY KCG + + +FD ++
Sbjct: 67 SIITACAQSKNLAGARAIHSHLSRSRLAGDGFLLNSLIHMYCKCGAVSDARHVFDGIPTR 126
Query: 292 DIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIF 351
D+V W +I+GYAQ + ++L + +M + P T L A G GR I
Sbjct: 127 DVVSWTYLITGYAQNDMPAEALGLLPDMLRARFRPSGFTFTSFLKAAGACG----GRGIG 182
Query: 352 ESMKS---KYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
E M + KY ++ + ++D+ R Q++ A+++ + + + + W +L+
Sbjct: 183 EQMHALAVKYNLDEDVYVGSALLDMYARCQQMDMAIRVFDWLD-SKNEVSWNALIAG 238
Score = 43.9 bits (102), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 67/141 (47%), Gaps = 14/141 (9%)
Query: 41 TVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKK--- 97
+LG + + + DAR++FD + ++D+V M+ + Q G E F+E+ K
Sbjct: 303 NTILGMYAKSGSMVDARKVFDRVDQRDLVTWNTMLTAFAQYGLGKEAVAHFEEIRKYGIQ 362
Query: 98 -NVISWTTMISGYVNNNRIDVARKLFEVMPEKN-------EVSWTAMLMGYTQCGRIQDA 149
N I++ ++++ + + ++ F++M + N VS+ +L + G +++A
Sbjct: 363 LNQITFLSVLTACSHGGLVKEGKQYFDMMKDYNVEPEIDHYVSFVDLL---GRAGLLKEA 419
Query: 150 WELFKAMPMKSVVASNSMILG 170
MPM+ A +LG
Sbjct: 420 LIFVFKMPMEPTAAVWGALLG 440
>gi|125537719|gb|EAY84114.1| hypothetical protein OsI_05496 [Oryza sativa Indica Group]
Length = 751
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 225/679 (33%), Positives = 373/679 (54%), Gaps = 80/679 (11%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MP+ N+ + A++ ++ + LF MPE++ VS+ ++ GF + +L+
Sbjct: 74 MPDPNLFTRNALLSALAHSRLVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLY 133
Query: 61 DMMPEKDVVAQTNMVLG----------------------------------------YCQ 80
+ ++ V T + L Y +
Sbjct: 134 RALLREESVRPTRITLSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAK 193
Query: 81 DGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGY 140
G + + R +F EM K V+ + T+I+G + I+ A+ LF++M +++ ++WT M+ G
Sbjct: 194 MGLIRDARRVFQEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGL 253
Query: 141 TQCGRIQDAWELFKAMPMKSV---------VASNSMILGLGQNGE--------------- 176
TQ G +A ++F+ M + V + + L + G+
Sbjct: 254 TQNGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAASEEGKQIHAYITRTWYEDNV 313
Query: 177 ---------------VQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKE 221
++ A VF +M ++ +W+ MI Y + E + F+ MQ +
Sbjct: 314 FVGSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMD 373
Query: 222 GVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKG 281
G++ + +L SV+S CA+LASL+ G Q H + + V++ L+T+Y KCG +
Sbjct: 374 GIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDA 433
Query: 282 KLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYT 341
+FD + D V W ++++GYAQ+G ++++ +F +M +G+ PD VT +GVLSACS
Sbjct: 434 HRLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLVNGLKPDGVTFIGVLSACSRA 493
Query: 342 GKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGS 401
G V++G + F+SM+ + + P +HY CM+DL R+G+ ++A + I+ MP PDA W +
Sbjct: 494 GLVEKGCDYFDSMQKDHDIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWAT 553
Query: 402 LLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNV 461
LL +CR +++ + AA+ LL+ +P+N Y+LL +++A++G++ +VA LR+ MR R V
Sbjct: 554 LLSSCRLRGNMEIGKWAAENLLETDPQNPASYVLLCSMHAAKGQWTEVAHLRRGMRDRQV 613
Query: 462 IKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVD 521
K PGCSWI+ + KVH+F+ D SHP I LE + + E GY PD S VLHDV
Sbjct: 614 KKEPGCSWIKYKNKVHIFSADD-QSHPFSSRIYEKLEWLNSKMAEEGYKPDVSSVLHDVA 672
Query: 522 EEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILR 581
+ +KVH + +HSEKLA+A+GL+ +P+ +PIR++KNLRVC DCH+A K ISK+ GR+I++R
Sbjct: 673 DADKVHMISHHSEKLAIAFGLIFVPQEMPIRIVKNLRVCVDCHNATKFISKITGRDILVR 732
Query: 582 DANRFHHFKDGLCSCRDYW 600
DA RFH F DG CSC D+W
Sbjct: 733 DAVRFHKFSDGTCSCGDFW 751
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 109/401 (27%), Positives = 208/401 (51%), Gaps = 11/401 (2%)
Query: 12 MVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQ 71
++ Y + G + A +F +MP+ N+ + +L + D RLF MPE+D V+
Sbjct: 54 LLTAYAKSGRLARARRVFDEMPDPNLFTRNALLSALAHSRLVPDMERLFASMPERDAVSY 113
Query: 72 TNMVLGYCQDGRVDEGREIFDEM-------PKKNVISWTTMISGYVNNNRI--DVARKLF 122
++ G+ G +++ + P + +S M++ +++ + V ++
Sbjct: 114 NALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIMVASALSDRALGHSVHCQVL 173
Query: 123 EVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARV 182
+ + ++ Y + G I+DA +F+ M K+VV N++I GL + ++ A+
Sbjct: 174 RLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLITGLLRCKMIEDAKG 233
Query: 183 VFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLAS 242
+F M ++D TW+ M+ + G +LE +D+F M+ EGV ++ + S+L+ C +LA+
Sbjct: 234 LFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAA 293
Query: 243 LDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISG 302
+ G+Q+HA + R ++ +V+V S L+ MY KC + + +F ++I+ W ++I G
Sbjct: 294 SEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVG 353
Query: 303 YAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEP 362
Y Q E++++ F EM G+ PDD TL V+S+C+ ++EG + L+
Sbjct: 354 YGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRY 413
Query: 363 KTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
T A +V L G+ G +EDA +L + M F D + W +L+
Sbjct: 414 ITVSNA-LVTLYGKCGSIEDAHRLFDEMSFH-DQVSWTALV 452
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 103/249 (41%), Gaps = 63/249 (25%)
Query: 165 NSMILGLGQNGEVQKARVVFDQ-------------------------------MREKDDA 193
N ++ ++G + +AR VFD+ M E+D
Sbjct: 52 NHLLTAYAKSGRLARARRVFDEMPDPNLFTRNALLSALAHSRLVPDMERLFASMPERDAV 111
Query: 194 TWSGMIKVYERKGYELEVIDLF-TLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQ 252
+++ +I + G + L+ L+++E VR +L +++ V ++L+ G VH Q
Sbjct: 112 SYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIMVASALSDRALGHSVHCQ 171
Query: 253 LVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSII------------ 300
++R F +V S L+ MY K G + + +F +K +VM+N++I
Sbjct: 172 VLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLITGLLRCKMIEDA 231
Query: 301 -------------------SGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYT 341
+G Q GL ++L VF M + GV D T +L+AC
Sbjct: 232 KGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGAL 291
Query: 342 GKVKEGREI 350
+EG++I
Sbjct: 292 AASEEGKQI 300
>gi|449518887|ref|XP_004166467.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g35030, mitochondrial-like [Cucumis sativus]
Length = 649
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 217/544 (39%), Positives = 337/544 (61%), Gaps = 36/544 (6%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPE-KNVVSWTVMLGGFIRDSRIDDARRL 59
MP+R+VVSWTA++ GY++ GMI EA TLF + KNVV+WT ++ G++R +RI++ARRL
Sbjct: 92 MPDRDVVSWTAVITGYIKCGMIEEAKTLFDRNDAIKNVVTWTALVSGYVRWNRIEEARRL 151
Query: 60 FDMMPEKDVVAQTNMVLGYCQDG-------------------------------RVDEGR 88
FD MP K+V++ M+ GY + G RVDE +
Sbjct: 152 FDAMPVKNVISWNTMIEGYARKGWIDQALDLFEXMPERNVVSWNTVITAFMQRRRVDEAQ 211
Query: 89 EIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQD 148
E+F+ MP+++VISWTTM++G N RID AR LF+ MP +N VSW M++GY Q R+ +
Sbjct: 212 ELFNRMPERDVISWTTMVAGLSKNGRIDDARLLFDKMPVRNVVSWNTMIIGYAQNMRLDE 271
Query: 149 AWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYE 208
A++LF+ MP + + + N+MI G QNG++++A F +M K+ TW+ +I + + G
Sbjct: 272 AFKLFEQMPERELSSWNTMITGFIQNGKLERAVDFFYKMSNKNVVTWTAVISGHVQDGRS 331
Query: 209 LEVIDLFTLMQ-KEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASV 267
E + +F+ MQ V+ N + +SVL C+ LA+L G+Q+H + + + V S
Sbjct: 332 EEALKIFSEMQAANNVKPNEGTFVSVLGACSKLAALCEGQQIHQIISKTVYQEVADVVSA 391
Query: 268 LITMYIKCGELVKGKLIFDN--FASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVM 325
LI MY KCGEL + IFD+ +D+V WN +I+ YA +G G K++ +F EM + G
Sbjct: 392 LINMYSKCGELELARKIFDDGSIGHRDVVSWNGMIAAYAHHGHGHKAISLFDEMQALGFR 451
Query: 326 PDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMK 385
PD+VT + +LSACS+ G V EG ++FE++ ++ + +H+ C+VDL GRAG++++A
Sbjct: 452 PDNVTYIALLSACSHAGLVDEGLKLFENLVRDRSIKLREDHFTCLVDLFGRAGRLQEAFD 511
Query: 386 LIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGR 445
I+ + +P A +W +LL C H +DL ++ A+KLL+ EP+NAG Y++LSNIYAS G+
Sbjct: 512 FIKGLEVKPSASVWAALLAGCNVHGHIDLGKLTAEKLLETEPENAGTYLVLSNIYASTGK 571
Query: 446 FHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLR 505
+ + A +R M+ + + K PGCSWIEV VH+F D SH E I +L + ++
Sbjct: 572 WREAAGVRMKMKDKGLKKQPGCSWIEVGNTVHVFVVGDN-SHREFENIYLLLHDLHTKMK 630
Query: 506 EAGY 509
+ G+
Sbjct: 631 KIGH 634
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 121/442 (27%), Positives = 220/442 (49%), Gaps = 52/442 (11%)
Query: 64 PEKDVVAQTN------MVLGYCQDGRVDEGREIFDEMPKKNVISWTTMI----------- 106
P +D A +N ++ ++G++ E R++F+EMP ++V+SWT +I
Sbjct: 56 PVRDFSANSNVARSNWLITQLGKEGKIGEARQVFEEMPDRDVVSWTAVITGYIKCGMIEE 115
Query: 107 ---------------------SGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGR 145
SGYV NRI+ AR+LF+ MP KN +SW M+ GY + G
Sbjct: 116 AKTLFDRNDAIKNVVTWTALVSGYVRWNRIEEARRLFDAMPVKNVISWNTMIEGYARKGW 175
Query: 146 IQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERK 205
I A +LF+ MP ++VV+ N++I Q V +A+ +F++M E+D +W+ M+ +
Sbjct: 176 IDQALDLFEXMPERNVVSWNTVITAFMQRRRVDEAQELFNRMPERDVISWTTMVAGLSKN 235
Query: 206 GYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVA 265
G + D L K VR N S +++ A LD ++ Q+ + ++
Sbjct: 236 G---RIDDARLLFDKMPVR-NVVSWNTMIIGYAQNMRLDEAFKLFEQMP----ERELSSW 287
Query: 266 SVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEM-FSSGV 324
+ +IT +I+ G+L + F ++K++V W ++ISG+ Q G E++LK+F EM ++ V
Sbjct: 288 NTMITGFIQNGKLERAVDFFYKMSNKNVVTWTAVISGHVQDGRSEEALKIFSEMQAANNV 347
Query: 325 MPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAM 384
P++ T V VL ACS + EG++I + + SK + + + + ++++ + G++E A
Sbjct: 348 KPNEGTFVSVLGACSKLAALCEGQQIHQII-SKTVYQEVADVVSALINMYSKCGELELAR 406
Query: 385 KLIEAMPF-EPDAIIWGSLLGAC--RTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYA 441
K+ + D + W ++ A H ++ + L P N YI L + +
Sbjct: 407 KIFDDGSIGHRDVVSWNGMIAAYAHHGHGHKAISLFDEMQALGFRPDNV-TYIALLSACS 465
Query: 442 SQGRFHDVAELRKNMRKRNVIK 463
G + +L +N+ + IK
Sbjct: 466 HAGLVDEGLKLFENLVRDRSIK 487
>gi|449437737|ref|XP_004136647.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
mitochondrial-like [Cucumis sativus]
Length = 649
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 217/544 (39%), Positives = 337/544 (61%), Gaps = 36/544 (6%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPE-KNVVSWTVMLGGFIRDSRIDDARRL 59
MP+R+VVSWTA++ GY++ GMI EA TLF + KNVV+WT ++ G++R +RI++ARRL
Sbjct: 92 MPDRDVVSWTAVITGYIKCGMIEEAKTLFDRNDAIKNVVTWTALVSGYVRWNRIEEARRL 151
Query: 60 FDMMPEKDVVAQTNMVLGYCQDG-------------------------------RVDEGR 88
FD MP K+V++ M+ GY + G RVDE +
Sbjct: 152 FDAMPVKNVISWNTMIEGYARKGWIDQALDLFEKMPERNVVSWNTVITAFMQRRRVDEAQ 211
Query: 89 EIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQD 148
E+F+ MP+++VISWTTM++G N RID AR LF+ MP +N VSW M++GY Q R+ +
Sbjct: 212 ELFNRMPERDVISWTTMVAGLSKNGRIDDARLLFDKMPVRNVVSWNTMIIGYAQNMRLDE 271
Query: 149 AWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYE 208
A++LF+ MP + + + N+MI G QNG++++A F +M K+ TW+ +I + + G
Sbjct: 272 AFKLFEQMPERELSSWNTMITGFIQNGKLERAVDFFYKMSNKNVVTWTAVISGHVQDGRS 331
Query: 209 LEVIDLFTLMQ-KEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASV 267
E + +F+ MQ V+ N + +SVL C+ LA+L G+Q+H + + + V S
Sbjct: 332 EEALKIFSEMQAANNVKPNEGTFVSVLGACSKLAALCEGQQIHQIISKTVYQEVADVVSA 391
Query: 268 LITMYIKCGELVKGKLIFDN--FASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVM 325
LI MY KCGEL + IFD+ +D+V WN +I+ YA +G G K++ +F EM + G
Sbjct: 392 LINMYSKCGELELARKIFDDGSIGHRDVVSWNGMIAAYAHHGHGHKAISLFDEMQALGFR 451
Query: 326 PDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMK 385
PD+VT + +LSACS+ G V EG ++FE++ ++ + +H+ C+VDL GRAG++++A
Sbjct: 452 PDNVTYIALLSACSHAGLVDEGLKLFENLVRDRSIKLREDHFTCLVDLFGRAGRLQEAFD 511
Query: 386 LIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGR 445
I+ + +P A +W +LL C H +DL ++ A+KLL+ EP+NAG Y++LSNIYAS G+
Sbjct: 512 FIKGLEVKPSASVWAALLAGCNVHGHIDLGKLTAEKLLETEPENAGTYLVLSNIYASTGK 571
Query: 446 FHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLR 505
+ + A +R M+ + + K PGCSWIEV VH+F D SH E I +L + ++
Sbjct: 572 WREAAGVRMKMKDKGLKKQPGCSWIEVGNTVHVFVVGDN-SHREFENIYLLLHDLHTKMK 630
Query: 506 EAGY 509
+ G+
Sbjct: 631 KIGH 634
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 121/442 (27%), Positives = 220/442 (49%), Gaps = 52/442 (11%)
Query: 64 PEKDVVAQTN------MVLGYCQDGRVDEGREIFDEMPKKNVISWTTMI----------- 106
P +D A +N ++ ++G++ E R++F+EMP ++V+SWT +I
Sbjct: 56 PVRDFSANSNVARSNWLITQLGKEGKIGEARQVFEEMPDRDVVSWTAVITGYIKCGMIEE 115
Query: 107 ---------------------SGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGR 145
SGYV NRI+ AR+LF+ MP KN +SW M+ GY + G
Sbjct: 116 AKTLFDRNDAIKNVVTWTALVSGYVRWNRIEEARRLFDAMPVKNVISWNTMIEGYARKGW 175
Query: 146 IQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERK 205
I A +LF+ MP ++VV+ N++I Q V +A+ +F++M E+D +W+ M+ +
Sbjct: 176 IDQALDLFEKMPERNVVSWNTVITAFMQRRRVDEAQELFNRMPERDVISWTTMVAGLSKN 235
Query: 206 GYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVA 265
G + D L K VR N S +++ A LD ++ Q+ + ++
Sbjct: 236 G---RIDDARLLFDKMPVR-NVVSWNTMIIGYAQNMRLDEAFKLFEQMP----ERELSSW 287
Query: 266 SVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEM-FSSGV 324
+ +IT +I+ G+L + F ++K++V W ++ISG+ Q G E++LK+F EM ++ V
Sbjct: 288 NTMITGFIQNGKLERAVDFFYKMSNKNVVTWTAVISGHVQDGRSEEALKIFSEMQAANNV 347
Query: 325 MPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAM 384
P++ T V VL ACS + EG++I + + SK + + + + ++++ + G++E A
Sbjct: 348 KPNEGTFVSVLGACSKLAALCEGQQIHQII-SKTVYQEVADVVSALINMYSKCGELELAR 406
Query: 385 KLIEAMPF-EPDAIIWGSLLGAC--RTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYA 441
K+ + D + W ++ A H ++ + L P N YI L + +
Sbjct: 407 KIFDDGSIGHRDVVSWNGMIAAYAHHGHGHKAISLFDEMQALGFRPDNV-TYIALLSACS 465
Query: 442 SQGRFHDVAELRKNMRKRNVIK 463
G + +L +N+ + IK
Sbjct: 466 HAGLVDEGLKLFENLVRDRSIK 487
>gi|414590987|tpg|DAA41558.1| TPA: hypothetical protein ZEAMMB73_311644 [Zea mays]
Length = 575
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 217/545 (39%), Positives = 320/545 (58%), Gaps = 32/545 (5%)
Query: 56 ARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRI 115
AR L D+ +T +V Y + GR D R FDE P+++V M++ YV +
Sbjct: 63 ARALKSGFAAADLFVRTALVEAYAKAGRADLARAAFDEAPRRDVFLCNVMLAAYVTRGEV 122
Query: 116 DVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNG 175
AR++F+ M E++ VSW M+ GY G
Sbjct: 123 AEARRVFDGMRERDMVSWNTMIHGYAVNG------------------------------- 151
Query: 176 EVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLS 235
EV AR VF+ M ++D +WS M+ Y + + ++L+ M+ V + +++SVLS
Sbjct: 152 EVDLAREVFNGMDDRDAFSWSSMMSAYTKGRRSKDALELWREMRAACVNPDCTTMVSVLS 211
Query: 236 VCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVM 295
C+ + +L G +VH + ++DV + + LI MY KCG++ +F + KD++
Sbjct: 212 ACSDMGALAVGAEVHQFVESNGVELDVKLGTALIDMYAKCGDIENSVRVFHSMPVKDVLT 271
Query: 296 WNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMK 355
W+S+I G A +G G +L +F M S G+ P++VT +GVL +C++ G V +G++ F SM
Sbjct: 272 WSSMIIGLANHGFGHDALSLFSRMLSEGLQPNEVTFIGVLISCTHLGLVSDGKKYFSSMS 331
Query: 356 SKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLA 415
+ V PK +HY CMVDLLGR+G +E+A +LI MPFEPDA+IW +LLGACR + +++A
Sbjct: 332 VVHGVTPKVQHYGCMVDLLGRSGHIEEAKQLIRDMPFEPDAVIWRALLGACRIYKNVEVA 391
Query: 416 EVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKK 475
E A KL L+P G Y+LLSNIYA + VAE+R+ +R+ + + PG S IE +
Sbjct: 392 EEAMAKLRVLDPHADGHYVLLSNIYAQANSWEGVAEMRRTLRRERIQRIPGRSSIEWQNT 451
Query: 476 VHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEK 535
+H F D SHP I +ML ++ LR+AGY P + VL D+DE+ K +L HSEK
Sbjct: 452 IHEFISGD-RSHPRSKEIYKMLGEMMDRLRQAGYKPMTGLVLQDIDEQSKERALAEHSEK 510
Query: 536 LAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCS 595
LAVA+GL+ P G +R+ KNLR C DCHSAIKLI+ + R++I+RD NRFHHF +G CS
Sbjct: 511 LAVAFGLLTTPAGSTLRITKNLRACEDCHSAIKLIALLYERKLIIRDRNRFHHFSEGRCS 570
Query: 596 CRDYW 600
C+DYW
Sbjct: 571 CKDYW 575
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 140/307 (45%), Gaps = 41/307 (13%)
Query: 41 TVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVI 100
T ++ + + R D AR FD P +DV M+ Y G V E R +FD M +++++
Sbjct: 79 TALVEAYAKAGRADLARAAFDEAPRRDVFLCNVMLAAYVTRGEVAEARRVFDGMRERDMV 138
Query: 101 SWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAM---- 156
SW TMI GY N +D+AR++F M +++ SW++M+ YT+ R +DA EL++ M
Sbjct: 139 SWNTMIHGYAVNGEVDLAREVFNGMDDRDAFSWSSMMSAYTKGRRSKDALELWREMRAAC 198
Query: 157 ------PMKSVVASNSMILGL-----------------------------GQNGEVQKAR 181
M SV+++ S + L + G+++ +
Sbjct: 199 VNPDCTTMVSVLSACSDMGALAVGAEVHQFVESNGVELDVKLGTALIDMYAKCGDIENSV 258
Query: 182 VVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLA 241
VF M KD TWS MI G+ + + LF+ M EG++ N + I VL C L
Sbjct: 259 RVFHSMPVKDVLTWSSMIIGLANHGFGHDALSLFSRMLSEGLQPNEVTFIGVLISCTHLG 318
Query: 242 SLDHGRQVHAQL-VRCQFDVDVYVASVLITMYIKCGELVKGK-LIFDNFASKDIVMWNSI 299
+ G++ + + V V ++ + + G + + K LI D D V+W ++
Sbjct: 319 LVSDGKKYFSSMSVVHGVTPKVQHYGCMVDLLGRSGHIEEAKQLIRDMPFEPDAVIWRAL 378
Query: 300 ISGYAQY 306
+ Y
Sbjct: 379 LGACRIY 385
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 105/248 (42%), Gaps = 49/248 (19%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
M ER++VSW M+ GY G + A +F M +++ SW+ M+ + + R DA L+
Sbjct: 132 MRERDMVSWNTMIHGYAVNGEVDLAREVFNGMDDRDAFSWSSMMSAYTKGRRSKDALELW 191
Query: 61 DMMP---------------------------------------EKDVVAQTNMVLGYCQD 81
M E DV T ++ Y +
Sbjct: 192 REMRAACVNPDCTTMVSVLSACSDMGALAVGAEVHQFVESNGVELDVKLGTALIDMYAKC 251
Query: 82 GRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVM----PEKNEVSWTAML 137
G ++ +F MP K+V++W++MI G N+ A LF M + NEV++ +L
Sbjct: 252 GDIENSVRVFHSMPVKDVLTWSSMIIGLANHGFGHDALSLFSRMLSEGLQPNEVTFIGVL 311
Query: 138 MGYTQCGRIQDAWELFKAMPM-----KSVVASNSMILGLGQNGEVQKAR-VVFDQMREKD 191
+ T G + D + F +M + V M+ LG++G +++A+ ++ D E D
Sbjct: 312 ISCTHLGLVSDGKKYFSSMSVVHGVTPKVQHYGCMVDLLGRSGHIEEAKQLIRDMPFEPD 371
Query: 192 DATWSGMI 199
W ++
Sbjct: 372 AVIWRALL 379
>gi|242090705|ref|XP_002441185.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
gi|241946470|gb|EES19615.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
Length = 878
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 226/616 (36%), Positives = 359/616 (58%), Gaps = 19/616 (3%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQ------MPEKNVVSWTVMLGGFIRDSRID 54
M R++VSW ++ G V G EA LF M ++ + + L I+ ++
Sbjct: 266 METRDMVSWNTLMAGLVLNGHDLEALQLFHDSRSSITMLTQSTYATVIKLCANIK--QLG 323
Query: 55 DARRLFDMMPEKDVVAQTNMVLG----YCQDGRVDEGREIFDEMP-KKNVISWTTMISGY 109
AR+L + ++ + N++ Y + G++ +IF M +NV+SWT MI+G
Sbjct: 324 LARQLHSSVLKRGFHSYGNVMTALMDAYSKAGQLGNALDIFLLMSGSQNVVSWTAMINGC 383
Query: 110 VNNNRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASN 165
+ N + +A LF M E N+ +++ +L Q ++ K + +
Sbjct: 384 IQNGDVPLAAALFSRMREDGVAPNDFTYSTILTASVASLPPQIHAQVIKTNYECTSIVGT 443
Query: 166 SMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRV 225
+++ + ++A +F + +KD +WS M+ Y + G ++F M G++
Sbjct: 444 ALLASYSKLCNTEEALSIFKMIDQKDVVSWSAMLTCYAQAGDSDGATNIFIKMTMHGLKP 503
Query: 226 NFPSLISVLSVCAS-LASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLI 284
N ++ SV+ CAS A +D GRQ HA ++ + + V+S L++MY + G + + I
Sbjct: 504 NEFTISSVIDACASPTAGVDLGRQFHAISIKHRCHDALCVSSALVSMYARKGSIESAQCI 563
Query: 285 FDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKV 344
F+ +D+V WNS++SGYAQ+G +K+L VF +M + G+ D VT + V+ C++ G V
Sbjct: 564 FERQTDRDLVSWNSMLSGYAQHGYSQKALDVFRQMEAEGIEMDGVTFLSVIMGCAHAGLV 623
Query: 345 KEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLG 404
+EG+ F+SM Y + P EHYACMVDL RAG++++AM LIE M F ++W +LLG
Sbjct: 624 EEGQRYFDSMARDYGITPTMEHYACMVDLYSRAGKLDEAMSLIEGMSFPAGPMVWRTLLG 683
Query: 405 ACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKP 464
AC+ H ++L ++AA+KLL LEP ++ Y+LLSNIY++ G++ + E+RK M + V K
Sbjct: 684 ACKVHKNVELGKLAAEKLLSLEPFDSATYVLLSNIYSAAGKWKEKDEVRKLMDTKKVKKE 743
Query: 465 PGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEE 524
GCSWI+++ KVH F D SHP I L + L++ GYCPD+SF LH+V EE+
Sbjct: 744 AGCSWIQIKNKVHSFIASD-KSHPLSEQIYAKLRAMTTKLKQEGYCPDTSFALHEVAEEQ 802
Query: 525 KVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDAN 584
K L HSE+LA+A+GL+ P G P+ + KNLRVCGDCH+ IK++SK+ REI++RD +
Sbjct: 803 KEAMLAMHSERLALAFGLIATPPGAPLHIFKNLRVCGDCHTVIKMVSKIEDREIVMRDCS 862
Query: 585 RFHHFKDGLCSCRDYW 600
RFHHF G+CSC D+W
Sbjct: 863 RFHHFNSGVCSCGDFW 878
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 126/240 (52%), Gaps = 1/240 (0%)
Query: 176 EVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLS 235
V R VF+ M +++ TW+ ++ Y + G +V++LF M+ EGV N + SVLS
Sbjct: 154 SVVDGRKVFEAMPKRNVVTWTSLLTGYIQDGALSDVMELFFRMRAEGVWPNSVTFASVLS 213
Query: 236 VCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVM 295
V AS +D GR+VHAQ V+ V+V + L+ MY KCG + + +++F ++D+V
Sbjct: 214 VVASQGMVDLGRRVHAQSVKFGCCSTVFVCNSLMNMYAKCGLVEEARVVFCGMETRDMVS 273
Query: 296 WNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMK 355
WN++++G G ++L++FH+ SS M T V+ C+ ++ R++ S+
Sbjct: 274 WNTLMAGLVLNGHDLEALQLFHDSRSSITMLTQSTYATVIKLCANIKQLGLARQLHSSVL 333
Query: 356 SKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLA 415
+ A M D +AGQ+ +A+ + M + + W +++ C + + LA
Sbjct: 334 KRGFHSYGNVMTALM-DAYSKAGQLGNALDIFLLMSGSQNVVSWTAMINGCIQNGDVPLA 392
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 131/275 (47%), Gaps = 40/275 (14%)
Query: 103 TTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMK--- 159
T+++ Y+ + + RK+FE MP++N V+WT++L GY Q G + D ELF M +
Sbjct: 143 TSLVDMYMKWHSVVDGRKVFEAMPKRNVVTWTSLLTGYIQDGALSDVMELFFRMRAEGVW 202
Query: 160 ----------SVVASNSMI-LG-------------------------LGQNGEVQKARVV 183
SVVAS M+ LG + G V++ARVV
Sbjct: 203 PNSVTFASVLSVVASQGMVDLGRRVHAQSVKFGCCSTVFVCNSLMNMYAKCGLVEEARVV 262
Query: 184 FDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASL 243
F M +D +W+ ++ G++LE + LF + + + +V+ +CA++ L
Sbjct: 263 FCGMETRDMVSWNTLMAGLVLNGHDLEALQLFHDSRSSITMLTQSTYATVIKLCANIKQL 322
Query: 244 DHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFA-SKDIVMWNSIISG 302
RQ+H+ +++ F V + L+ Y K G+L IF + S+++V W ++I+G
Sbjct: 323 GLARQLHSSVLKRGFHSYGNVMTALMDAYSKAGQLGNALDIFLLMSGSQNVVSWTAMING 382
Query: 303 YAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSA 337
Q G + +F M GV P+D T +L+A
Sbjct: 383 CIQNGDVPLAAALFSRMREDGVAPNDFTYSTILTA 417
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 114/232 (49%), Gaps = 6/232 (2%)
Query: 176 EVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQK-EGVRVNFPSLISVL 234
+ AR FD++ ++ T + + R+G + +D F + + G RV +L+ VL
Sbjct: 53 DATGARQAFDEIPHRN--TLDHALFDHARRGSVHQALDHFLDVHRCHGGRVGGGALVGVL 110
Query: 235 SVCASLASLDHGRQVHAQLVRCQFDV-DVYVASVLITMYIKCGELVKGKLIFDNFASKDI 293
VC S+ G+Q+H +RC D DV V + L+ MY+K +V G+ +F+ +++
Sbjct: 111 KVCGSVPDRVLGKQLHGLCIRCGHDRGDVGVGTSLVDMYMKWHSVVDGRKVFEAMPKRNV 170
Query: 294 VMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFES 353
V W S+++GY Q G +++F M + GV P+ VT VLS + G V GR + +
Sbjct: 171 VTWTSLLTGYIQDGALSDVMELFFRMRAEGVWPNSVTFASVLSVVASQGMVDLGRRV-HA 229
Query: 354 MKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
K+ ++++ + G VE+A + M D + W +L+
Sbjct: 230 QSVKFGCCSTVFVCNSLMNMYAKCGLVEEARVVFCGMETR-DMVSWNTLMAG 280
>gi|224120094|ref|XP_002331135.1| predicted protein [Populus trichocarpa]
gi|222872863|gb|EEF09994.1| predicted protein [Populus trichocarpa]
Length = 799
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 236/650 (36%), Positives = 365/650 (56%), Gaps = 53/650 (8%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGF-IRDSRIDDARRLFD 61
E NV TA+V Y + G + +A +F +M +++VV+W M+ GF + + D+ RL
Sbjct: 151 ESNVYVSTALVDFYAKCGCLDDAKEVFDKMHKRDVVAWNSMISGFSLHEGSYDEVARLLV 210
Query: 62 MMPEKDVVAQTNMVLGY----CQDGRVDEGREIFDEMPKK----NVISWTTMISGYVNNN 113
M + DV ++ ++G Q + G+EI ++ +V+ T ++ Y
Sbjct: 211 QM-QNDVSPNSSTIVGVLPAVAQVNSLRHGKEIHGFCVRRGFVGDVVVGTGILDVYGKCQ 269
Query: 114 RIDVARKLFEVMP-EKNEVSWTAMLMGYTQCGRIQDAWELF-------------KAMPMK 159
ID AR++F++M KNEV+W+AM+ Y C +++A ELF A+ +
Sbjct: 270 CIDYARRIFDMMGIVKNEVTWSAMVGAYVVCDFMREALELFCQLLMLKDDVIVLSAVTLA 329
Query: 160 SVV-----------------------------ASNSMILGLGQNGEVQKARVVFDQMREK 190
+V+ N+++ + G + A F++M +
Sbjct: 330 TVIRVCANLTDLSTGTCLHCYAIKSGFVLDLMVGNTLLSMYAKCGIINGAMRFFNEMDLR 389
Query: 191 DDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVH 250
D +++ +I Y + G E + +F MQ G+ +L SVL CA LA L +G H
Sbjct: 390 DAVSFTAIISGYVQNGNSEEGLRMFLEMQLSGINPEKATLASVLPACAHLAGLHYGSCSH 449
Query: 251 AQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGE 310
+ C F D + + LI MY KCG++ + +FD + IV WN++I Y +G+G
Sbjct: 450 CYAIICGFTADTMICNALIDMYAKCGKIDTARKVFDRMHKRGIVSWNTMIIAYGIHGIGL 509
Query: 311 KSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACM 370
++L +F M S G+ PDDVT + ++SACS++G V EG+ F +M + + P+ EHYACM
Sbjct: 510 EALLLFDNMQSEGLKPDDVTFICLISACSHSGLVAEGKYWFNAMTQDFGIIPRMEHYACM 569
Query: 371 VDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNA 430
VDLL RAG ++ IE MP EPD +WG+LL ACR + ++L E +KK+ +L P++
Sbjct: 570 VDLLSRAGLFKEVHSFIEKMPLEPDVRVWGALLSACRVYKNVELGEGVSKKIQKLGPEST 629
Query: 431 GPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEH 490
G ++LLSN+Y++ GR+ D A++R +++ K PGCSWIE+ VH F G SHP+
Sbjct: 630 GNFVLLSNMYSAVGRWDDAAQVRFTQKEQGFEKSPGCSWIEISGVVHTFLGGGYRSHPQL 689
Query: 491 PMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVP 550
I L+++ ++ GY +SS+V DV+EEEK L YHSEKLA+A+G++ L
Sbjct: 690 TQISNKLDELLVEMKRLGYQAESSYVFQDVEEEEKERVLLYHSEKLAIAFGILSLSPDKH 749
Query: 551 IRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
I V KNLRVCGDCH+AIK IS V R+I +RDA+RFHHFKDG+C+C D+W
Sbjct: 750 IIVTKNLRVCGDCHTAIKFISLVTKRDITVRDASRFHHFKDGICNCGDFW 799
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 120/438 (27%), Positives = 211/438 (48%), Gaps = 38/438 (8%)
Query: 1 MPER--NVVSWTAMVRGYVEEGMITEAGTLFWQM------PEKNVVSWTVMLGGFIRDSR 52
MP R NVV W ++R Y G EA L+++M P + + + ++++
Sbjct: 77 MPHRPKNVVLWNLLIRAYAWNGPYEEAIDLYYKMLGYGITPNRFTFPFVLKACSALKEAS 136
Query: 53 ID-----DARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMIS 107
D +RL E +V T +V Y + G +D+ +E+FD+M K++V++W +MIS
Sbjct: 137 EGREIHCDIKRL---RLESNVYVSTALVDFYAKCGCLDDAKEVFDKMHKRDVVAWNSMIS 193
Query: 108 GYV--NNNRIDVARKLFEVMPE--KNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKS--- 160
G+ + +VAR L ++ + N + +L Q ++ E+ +
Sbjct: 194 GFSLHEGSYDEVARLLVQMQNDVSPNSSTIVGVLPAVAQVNSLRHGKEIHGFCVRRGFVG 253
Query: 161 -VVASNSMILGLGQNGEVQKARVVFDQMR-EKDDATWSGMIKVYERKGYELEVIDLFT-- 216
VV ++ G+ + AR +FD M K++ TWS M+ Y + E ++LF
Sbjct: 254 DVVVGTGILDVYGKCQCIDYARRIFDMMGIVKNEVTWSAMVGAYVVCDFMREALELFCQL 313
Query: 217 LMQKEGVRV-NFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKC 275
LM K+ V V + +L +V+ VCA+L L G +H ++ F +D+ V + L++MY KC
Sbjct: 314 LMLKDDVIVLSAVTLATVIRVCANLTDLSTGTCLHCYAIKSGFVLDLMVGNTLLSMYAKC 373
Query: 276 GELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVL 335
G + F+ +D V + +IISGY Q G E+ L++F EM SG+ P+ TL VL
Sbjct: 374 GIINGAMRFFNEMDLRDAVSFTAIISGYVQNGNSEEGLRMFLEMQLSGINPEKATLASVL 433
Query: 336 SACSYTGKVKEGREIFESMKSKYLV----EPKTEHYACMVDLLGRAGQVEDAMKLIEAMP 391
AC++ + G S Y + T ++D+ + G+++ A K+ + M
Sbjct: 434 PACAHLAGLHYG-----SCSHCYAIICGFTADTMICNALIDMYAKCGKIDTARKVFDRM- 487
Query: 392 FEPDAIIWGSLLGACRTH 409
+ + W +++ A H
Sbjct: 488 HKRGIVSWNTMIIAYGIH 505
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 124/233 (53%), Gaps = 5/233 (2%)
Query: 176 EVQKARVVFDQM--REKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISV 233
E++ AR VFD+M R K+ W+ +I+ Y G E IDL+ M G+ N + V
Sbjct: 66 ELKIARHVFDKMPHRPKNVVLWNLLIRAYAWNGPYEEAIDLYYKMLGYGITPNRFTFPFV 125
Query: 234 LSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDI 293
L C++L GR++H + R + + +VYV++ L+ Y KCG L K +FD +D+
Sbjct: 126 LKACSALKEASEGREIHCDIKRLRLESNVYVSTALVDFYAKCGCLDDAKEVFDKMHKRDV 185
Query: 294 VMWNSIISGYAQY-GLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFE 352
V WNS+ISG++ + G ++ ++ +M + V P+ T+VGVL A + ++ G+EI
Sbjct: 186 VAWNSMISGFSLHEGSYDEVARLLVQM-QNDVSPNSSTIVGVLPAVAQVNSLRHGKEIHG 244
Query: 353 SMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
+ V ++D+ G+ ++ A ++ + M + + W +++GA
Sbjct: 245 FCVRRGFVGDVVVGTG-ILDVYGKCQCIDYARRIFDMMGIVKNEVTWSAMVGA 296
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 82/338 (24%), Positives = 158/338 (46%), Gaps = 26/338 (7%)
Query: 87 GREIFDEMPK--KNVISWTTMISGYVNNN----RIDVARKLFEVMPEKNEVSWTAMLMGY 140
R +FD+MP KNV+ W +I Y N ID+ K+ N ++ +L
Sbjct: 70 ARHVFDKMPHRPKNVVLWNLLIRAYAWNGPYEEAIDLYYKMLGYGITPNRFTFPFVLKAC 129
Query: 141 TQCGRIQDAWEL---FKAMPMKS-VVASNSMILGLGQNGEVQKARVVFDQMREKDDATWS 196
+ + E+ K + ++S V S +++ + G + A+ VFD+M ++D W+
Sbjct: 130 SALKEASEGREIHCDIKRLRLESNVYVSTALVDFYAKCGCLDDAKEVFDKMHKRDVVAWN 189
Query: 197 GMIKVYE-RKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVR 255
MI + +G EV L MQ + V N +++ VL A + SL HG+++H VR
Sbjct: 190 SMISGFSLHEGSYDEVARLLVQMQND-VSPNSSTIVGVLPAVAQVNSLRHGKEIHGFCVR 248
Query: 256 CQFDVDVYVASVLITMYIKCGELVKGKLIFDNFA-SKDIVMWNSIISGYAQYGLGEKSLK 314
F DV V + ++ +Y KC + + IFD K+ V W++++ Y ++L+
Sbjct: 249 RGFVGDVVVGTGILDVYGKCQCIDYARRIFDMMGIVKNEVTWSAMVGAYVVCDFMREALE 308
Query: 315 VFHEMFSSGVMPDD------VTLVGVLSACSYTGKVKEGREIF-ESMKSKYLVEPKTEHY 367
+F ++ ++ DD VTL V+ C+ + G + ++KS ++++ +
Sbjct: 309 LFCQLL---MLKDDVIVLSAVTLATVIRVCANLTDLSTGTCLHCYAIKSGFVLDLMVGNT 365
Query: 368 ACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
++ + + G + AM+ M DA+ + +++
Sbjct: 366 --LLSMYAKCGIINGAMRFFNEMDLR-DAVSFTAIISG 400
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 94/199 (47%), Gaps = 17/199 (8%)
Query: 223 VRVNFPSLISVLSVCASLASLDHGRQVHAQLVRC----------QFDVDVYVASVLITMY 272
R++ +L C SL G+ +H L++C FDV L+ +Y
Sbjct: 5 TRLSLEYCTVLLESCIQSKSLFRGKLIHQHLLKCLHRTHETNLTNFDVPF---EKLVDLY 61
Query: 273 IKCGELVKGKLIFDNFAS--KDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVT 330
I C EL + +FD K++V+WN +I YA G E+++ ++++M G+ P+ T
Sbjct: 62 IACSELKIARHVFDKMPHRPKNVVLWNLLIRAYAWNGPYEEAIDLYYKMLGYGITPNRFT 121
Query: 331 LVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAM 390
VL ACS + EGREI +K + +E +VD + G ++DA ++ + M
Sbjct: 122 FPFVLKACSALKEASEGREIHCDIK-RLRLESNVYVSTALVDFYAKCGCLDDAKEVFDKM 180
Query: 391 PFEPDAIIWGSLLGACRTH 409
+ D + W S++ H
Sbjct: 181 -HKRDVVAWNSMISGFSLH 198
>gi|297798510|ref|XP_002867139.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
gi|297312975|gb|EFH43398.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
Length = 824
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 233/618 (37%), Positives = 362/618 (58%), Gaps = 22/618 (3%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVML------GGFIRDSRID 54
MP R++ SW AM+ GY + G EA TL + + V+ +L G F R I
Sbjct: 211 MPTRDMGSWNAMISGYCQSGNAKEALTLSDGLRAMDSVTVVSLLSACTEAGDFNRGVTIH 270
Query: 55 DARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNR 114
+ E ++ ++ Y + G + + +++FD M +++ISW ++I Y N +
Sbjct: 271 SYSIKHGL--ESELFVSNKLIDLYAEFGSLKDCQKVFDRMYVRDLISWNSIIKAYELNEQ 328
Query: 115 IDVARKLFEVM------PE-KNEVSWTAML--MGYTQCGRIQDAWELFKAMPMKSVVASN 165
A LF+ M P+ +S ++L +G + R + L K ++ + N
Sbjct: 329 PLRAILLFQEMRLSRIQPDCLTLISLASILSQLGEIRACRSVQGFTLRKGWFLEDITIGN 388
Query: 166 SMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEG--V 223
++++ + G V AR VF+ + KD +W+ +I Y + G+ E I+++ +M++EG +
Sbjct: 389 AVVVMYAKLGLVDSARAVFNWLPNKDVISWNTIISGYAQNGFASEAIEMYNIMEEEGGEI 448
Query: 224 RVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKL 283
N + +SVL C+ +L G ++H +L++ +DV+V + L MY KCG L
Sbjct: 449 SANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVGTSLADMYGKCGRLDDALS 508
Query: 284 IFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGK 343
+F + V WN++I+ + +G GEK++ +F EM GV PD +T V +LSACS++G
Sbjct: 509 LFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGL 568
Query: 344 VKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
V EG FE M++ Y + P +HY CMVDL GRAGQ+E A+ I++MP +PDA IWG+LL
Sbjct: 569 VDEGEWCFEMMQTDYGITPSLKHYGCMVDLYGRAGQLEIALNFIKSMPLQPDASIWGALL 628
Query: 404 GACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIK 463
ACR H +DL ++A++ L ++EP++ G ++LLSN+YAS G++ V E+R + + K
Sbjct: 629 SACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSITSGKGLRK 688
Query: 464 PPGCSWIEVEKKVHMF-TGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDE 522
PG S +EV+ KV +F TG +HP + + R L + L+ GY PD FVL DV++
Sbjct: 689 TPGWSSMEVDNKVEVFYTGNQ--THPMYEEMYRELTALHEKLKMVGYVPDHRFVLQDVED 746
Query: 523 EEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRD 582
+EK H L HSE+LA+A+ L+ P IR+ KNLRVCGDCHS K ISK+ REII+RD
Sbjct: 747 DEKEHILMSHSERLAMAFALITTPAKTTIRIFKNLRVCGDCHSVTKFISKITEREIIVRD 806
Query: 583 ANRFHHFKDGLCSCRDYW 600
+NRFHHFK+G+CSC DYW
Sbjct: 807 SNRFHHFKNGVCSCGDYW 824
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 118/483 (24%), Positives = 217/483 (44%), Gaps = 54/483 (11%)
Query: 4 RNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMM 63
+NV +V Y G + A F + ++V +W +M+ G+ R + R F +
Sbjct: 84 QNVCISAKLVNLYCYLGNVALARYTFDHIHNRDVYAWNLMISGYGRAGYSSEVIRCFSLF 143
Query: 64 -------PEK------------------------------DVVAQTNMVLGYCQDGRVDE 86
P+ DV +++ YC+ G V
Sbjct: 144 MLSSGLQPDYRTFPSVLKACRNVTDGNKIHCLALKFGFMWDVYVAASLIHLYCRYGAVVN 203
Query: 87 GREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRI 146
R +FDEMP +++ SW MISGY + A L + + + V+ ++L T+ G
Sbjct: 204 ARILFDEMPTRDMGSWNAMISGYCQSGNAKEALTLSDGLRAMDSVTVVSLLSACTEAGDF 263
Query: 147 QDAWEL----FKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVY 202
+ K + SN +I + G ++ + VFD+M +D +W+ +IK Y
Sbjct: 264 NRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGSLKDCQKVFDRMYVRDLISWNSIIKAY 323
Query: 203 ERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHA-QLVRCQFDVD 261
E L I LF M+ ++ + +LIS+ S+ + L + R V L + F D
Sbjct: 324 ELNEQPLRAILLFQEMRLSRIQPDCLTLISLASILSQLGEIRACRSVQGFTLRKGWFLED 383
Query: 262 VYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFS 321
+ + + ++ MY K G + + +F+ +KD++ WN+IISGYAQ G +++++++ M
Sbjct: 384 ITIGNAVVVMYAKLGLVDSARAVFNWLPNKDVISWNTIISGYAQNGFASEAIEMYNIMEE 443
Query: 322 SG--VMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYL---VEPKTEHYACMVDLLGR 376
G + + T V VL ACS G +++G ++ + L V T + D+ G+
Sbjct: 444 EGGEISANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVGTS----LADMYGK 499
Query: 377 AGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQ--LEPKNAGPYI 434
G+++DA+ L +P +++ W +L+ H + A + K++L ++P +
Sbjct: 500 CGRLDDALSLFYQIP-RVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVT 558
Query: 435 LLS 437
LLS
Sbjct: 559 LLS 561
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 87/179 (48%), Gaps = 10/179 (5%)
Query: 232 SVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASK 291
++ C +L S + +HA+LV +V +++ L+ +Y G + + FD+ ++
Sbjct: 59 TLFRYCTNLQS---AKCLHARLVVSNAIQNVCISAKLVNLYCYLGNVALARYTFDHIHNR 115
Query: 292 DIVMWNSIISGYAQYGLGEKSLKVFHE-MFSSGVMPDDVTLVGVLSACSYTGKVKEGREI 350
D+ WN +ISGY + G + ++ F M SSG+ PD T VL AC V +G +I
Sbjct: 116 DVYAWNLMISGYGRAGYSSEVIRCFSLFMLSSGLQPDYRTFPSVLKACR---NVTDGNKI 172
Query: 351 FESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL-GACRT 408
+ K+ A ++ L R G V +A L + MP D W +++ G C++
Sbjct: 173 -HCLALKFGFMWDVYVAASLIHLYCRYGAVVNARILFDEMP-TRDMGSWNAMISGYCQS 229
>gi|357116278|ref|XP_003559909.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Brachypodium distachyon]
Length = 585
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 217/500 (43%), Positives = 312/500 (62%), Gaps = 3/500 (0%)
Query: 103 TTMISGYVNN--NRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKS 160
T ++ Y I +AR F+ P ++ ML Y G + +A ++F M +
Sbjct: 87 TALVEMYAKTAAGEIALARAAFDEAPRRDVFLCNVMLAAYVARGEVAEARKVFDGMSGRD 146
Query: 161 VVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQK 220
+V+ N+MI G G+V AR +FD R++D +WS MI Y + E ++L+ M+
Sbjct: 147 LVSWNTMIHGYAVRGDVGMAREIFDGTRDRDAFSWSSMISAYAKGRCSKEALELWREMRV 206
Query: 221 EGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVK 280
GV + S++SVLS C+++ +L G +VH + + +VD+ + + L+ MY KCG++
Sbjct: 207 AGVAPDCISMVSVLSACSAMGALAIGAEVHRFVESNRVEVDMKLGTALVDMYAKCGDIEN 266
Query: 281 GKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSY 340
+F KD++ W+S+I G A +GLG +L +F EM S G+ P+++T +GVL AC++
Sbjct: 267 SLKVFHAMPVKDVLTWSSMIIGLANHGLGHDALSLFSEMISQGLQPNEITFIGVLIACTH 326
Query: 341 TGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWG 400
G V +G++ F SM + V P+ EHY CMVDLLGRAG VE+AM+LI +M F+PD IIW
Sbjct: 327 VGLVNDGKKYFSSMSDVHGVVPRMEHYGCMVDLLGRAGHVEEAMELIRSMTFKPDPIIWR 386
Query: 401 SLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRN 460
+LLGACR H +++AE A KL L+P G Y+LLSNIYA + VAE+RK +R+ N
Sbjct: 387 TLLGACRIHKNVEIAEEAMAKLKVLDPLADGHYVLLSNIYAQANSWEGVAEMRKTIRREN 446
Query: 461 VIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDV 520
+ + PG S IE E VH F D SHP I +MLE++ LR+AGY P +S VL D+
Sbjct: 447 IQRVPGRSSIEWENTVHEFVSGD-RSHPRIEEIYKMLEEMMDRLRQAGYRPMTSLVLQDI 505
Query: 521 DEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIIL 580
DE+ K +L HSEKLA+A+GL+ P +R+ KNLR C DCHSAIKLIS R++I+
Sbjct: 506 DEQSKKRALAEHSEKLAIAFGLLVTPARSTLRITKNLRACEDCHSAIKLISLAYDRKLIV 565
Query: 581 RDANRFHHFKDGLCSCRDYW 600
RD NRFHHF +G CSC+DYW
Sbjct: 566 RDRNRFHHFSEGQCSCKDYW 585
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 109/237 (45%), Gaps = 39/237 (16%)
Query: 56 ARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRI 115
AR FD P +DV M+ Y G V E R++FD M ++++SW TMI GY +
Sbjct: 104 ARAAFDEAPRRDVFLCNVMLAAYVARGEVAEARKVFDGMSGRDLVSWNTMIHGYAVRGDV 163
Query: 116 DVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAM----------PMKSVVASN 165
+AR++F+ +++ SW++M+ Y + ++A EL++ M M SV+++
Sbjct: 164 GMAREIFDGTRDRDAFSWSSMISAYAKGRCSKEALELWREMRVAGVAPDCISMVSVLSAC 223
Query: 166 SMI--LGLGQN---------------------------GEVQKARVVFDQMREKDDATWS 196
S + L +G G+++ + VF M KD TWS
Sbjct: 224 SAMGALAIGAEVHRFVESNRVEVDMKLGTALVDMYAKCGDIENSLKVFHAMPVKDVLTWS 283
Query: 197 GMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQL 253
MI G + + LF+ M +G++ N + I VL C + ++ G++ + +
Sbjct: 284 SMIIGLANHGLGHDALSLFSEMISQGLQPNEITFIGVLIACTHVGLVNDGKKYFSSM 340
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 99/219 (45%), Gaps = 41/219 (18%)
Query: 10 TAMVRGYVEE--GMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKD 67
TA+V Y + G I A F + P ++V VML ++ + +AR++FD M +D
Sbjct: 87 TALVEMYAKTAAGEIALARAAFDEAPRRDVFLCNVMLAAYVARGEVAEARKVFDGMSGRD 146
Query: 68 VVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMP- 126
+V+ M+ GY G V REIFD ++ SW++MIS Y A +L+ M
Sbjct: 147 LVSWNTMIHGYAVRGDVGMAREIFDGTRDRDAFSWSSMISAYAKGRCSKEALELWREMRV 206
Query: 127 ---------------------------------EKNEVS-----WTAMLMGYTQCGRIQD 148
E N V TA++ Y +CG I++
Sbjct: 207 AGVAPDCISMVSVLSACSAMGALAIGAEVHRFVESNRVEVDMKLGTALVDMYAKCGDIEN 266
Query: 149 AWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQM 187
+ ++F AMP+K V+ +SMI+GL +G A +F +M
Sbjct: 267 SLKVFHAMPVKDVLTWSSMIIGLANHGLGHDALSLFSEM 305
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 98/229 (42%), Gaps = 67/229 (29%)
Query: 246 GRQVHAQLVRCQFDV-DVYVASVLITMYIK--CGELVKGKL------------------- 283
G +HA+ +R F D++V + L+ MY K GE+ +
Sbjct: 66 GASLHARALRSGFAAADLFVRTALVEMYAKTAAGEIALARAAFDEAPRRDVFLCNVMLAA 125
Query: 284 ------------IFDNFASKDIVMWNSIISGYAQYG------------------------ 307
+FD + +D+V WN++I GYA G
Sbjct: 126 YVARGEVAEARKVFDGMSGRDLVSWNTMIHGYAVRGDVGMAREIFDGTRDRDAFSWSSMI 185
Query: 308 -------LGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLV 360
+++L+++ EM +GV PD +++V VLSACS G + G E+ ++S V
Sbjct: 186 SAYAKGRCSKEALELWREMRVAGVAPDCISMVSVLSACSAMGALAIGAEVHRFVESNR-V 244
Query: 361 EPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTH 409
E + +VD+ + G +E+++K+ AMP + D + W S++ H
Sbjct: 245 EVDMKLGTALVDMYAKCGDIENSLKVFHAMPVK-DVLTWSSMIIGLANH 292
>gi|326490792|dbj|BAJ90063.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 754
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 241/686 (35%), Positives = 375/686 (54%), Gaps = 88/686 (12%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGF------------- 47
MP+ N+ + A++ ++ + LF MP+++ VS+ ++ GF
Sbjct: 71 MPDPNLFTRNALLSALAHARLLPDMDRLFASMPQRDAVSYNALIAGFSGAGAPARAAGAY 130
Query: 48 --------------IRDSRID------DARRLFDMMPEKDVVAQTNMVLG---------- 77
+R SRI A L D + V Q M LG
Sbjct: 131 RALLREEAVVDGARVRPSRITMSGMVMAASALGDRALGRQVHCQI-MRLGFGAYAFTWSP 189
Query: 78 ----YCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSW 133
Y + G + + + +FDEM KNV+ + TMI+G + ++ AR +FE M +++ ++W
Sbjct: 190 LVDMYAKMGLIGDAKRVFDEMVVKNVVMYNTMITGLLRCKMVEEARGVFEAMVDRDSITW 249
Query: 134 TAMLMGYTQCGRIQDAWELFKAMPMKSV---------VASNSMILGLGQNGE-------- 176
T M+ G TQ G +A ++F+ M + V + + L + G+
Sbjct: 250 TTMVTGLTQNGLQSEALDVFRRMRAEGVGIDQYTFGSILTACGALAASEEGKQIHAYTIR 309
Query: 177 ----------------------VQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDL 214
++ A VF +M K+ +W+ MI Y + G E + +
Sbjct: 310 TLYDGNIFVGSALVDMYSKCRSIRLAEAVFRRMTCKNIISWTAMIVGYGQNGCGEEAVRV 369
Query: 215 FTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIK 274
F+ MQ +G++ N +L SV+S CA+LASL+ G Q H + + V+S L+T+Y K
Sbjct: 370 FSEMQTDGIKPNDFTLGSVISSCANLASLEEGAQFHCMALVSGLRPYITVSSALVTLYGK 429
Query: 275 CGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGV 334
CG + +FD D V + +++SGYAQ+G ++++ +F +M GV P+ VT +GV
Sbjct: 430 CGSIEDAHRLFDEMPFHDQVSYTALVSGYAQFGKAKETIDLFEKMLLKGVKPNGVTFIGV 489
Query: 335 LSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEP 394
LSACS +G V++G F SM+ + + +HY CM+DL R+G++++A + I MP P
Sbjct: 490 LSACSRSGLVEKGCSYFHSMQQDHGIVLLDDHYTCMIDLYSRSGRLKEAEEFIRQMPRCP 549
Query: 395 DAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRK 454
DAI W +LL ACR +++ + AA+ LL+ +P+N Y+LL +++AS+G + +VA LR+
Sbjct: 550 DAIGWATLLSACRLRGDMEIGKWAAENLLKTDPQNPASYVLLCSMHASKGEWSEVALLRR 609
Query: 455 NMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSS 514
MR R V K PGCSWI+ + +VH+F+ D SHP I L+ + + E GY PD S
Sbjct: 610 GMRDRQVKKEPGCSWIKYKNRVHIFSADD-QSHPFSGTIYEKLQWLNSKMAEEGYKPDVS 668
Query: 515 FVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVM 574
VLHDV + EKVH L HSEKLA+A+GL+ +PE +PIRV+KNLRVC DCH+A K ISK+
Sbjct: 669 SVLHDVADAEKVHMLSNHSEKLAIAFGLIFVPEEMPIRVVKNLRVCVDCHNATKFISKIT 728
Query: 575 GREIILRDANRFHHFKDGLCSCRDYW 600
GR+I++RDA RFH F +G+CSC D+W
Sbjct: 729 GRDILVRDAVRFHKFSNGICSCGDFW 754
Score = 206 bits (523), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 118/411 (28%), Positives = 212/411 (51%), Gaps = 25/411 (6%)
Query: 12 MVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQ 71
++ Y G + A LF MP+ N+ + +L + D RLF MP++D V+
Sbjct: 51 LLTAYARSGRLPLARRLFDAMPDPNLFTRNALLSALAHARLLPDMDRLFASMPQRDAVSY 110
Query: 72 TNMVLGYC-----------------QDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNR 114
++ G+ ++ VD R P + +S M + + +
Sbjct: 111 NALIAGFSGAGAPARAAGAYRALLREEAVVDGAR----VRPSRITMSGMVMAASALGDRA 166
Query: 115 I--DVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLG 172
+ V ++ + +W+ ++ Y + G I DA +F M +K+VV N+MI GL
Sbjct: 167 LGRQVHCQIMRLGFGAYAFTWSPLVDMYAKMGLIGDAKRVFDEMVVKNVVMYNTMITGLL 226
Query: 173 QNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLIS 232
+ V++AR VF+ M ++D TW+ M+ + G + E +D+F M+ EGV ++ + S
Sbjct: 227 RCKMVEEARGVFEAMVDRDSITWTTMVTGLTQNGLQSEALDVFRRMRAEGVGIDQYTFGS 286
Query: 233 VLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKD 292
+L+ C +LA+ + G+Q+HA +R +D +++V S L+ MY KC + + +F K+
Sbjct: 287 ILTACGALAASEEGKQIHAYTIRTLYDGNIFVGSALVDMYSKCRSIRLAEAVFRRMTCKN 346
Query: 293 IVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFE 352
I+ W ++I GY Q G GE++++VF EM + G+ P+D TL V+S+C+ ++EG + F
Sbjct: 347 IISWTAMIVGYGQNGCGEEAVRVFSEMQTDGIKPNDFTLGSVISSCANLASLEEGAQ-FH 405
Query: 353 SMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
M + P + +V L G+ G +EDA +L + MPF D + + +L+
Sbjct: 406 CMALVSGLRPYITVSSALVTLYGKCGSIEDAHRLFDEMPFH-DQVSYTALV 455
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 96/423 (22%), Positives = 162/423 (38%), Gaps = 101/423 (23%)
Query: 105 MISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVAS 164
+++ Y + R+ +AR+LF+ MP+ N + A+L + D LF +MP + V+
Sbjct: 51 LLTAYARSGRLPLARRLFDAMPDPNLFTRNALLSALAHARLLPDMDRLFASMPQRDAVSY 110
Query: 165 NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVR 224
N++I G G +A + + ++ V+D G R
Sbjct: 111 NALIAGFSGAGAPARAAGAYRALLREE------------------AVVD--------GAR 144
Query: 225 VNFPSLISVLSVCASLASLDH---GRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKG 281
V PS I++ + + ++L GRQVH Q++R F + S L+ MY K G +
Sbjct: 145 VR-PSRITMSGMVMAASALGDRALGRQVHCQIMRLGFGAYAFTWSPLVDMYAKMGLIGDA 203
Query: 282 KLIFDNFASKDIVM-------------------------------WNSIISGYAQYGLGE 310
K +FD K++VM W ++++G Q GL
Sbjct: 204 KRVFDEMVVKNVVMYNTMITGLLRCKMVEEARGVFEAMVDRDSITWTTMVTGLTQNGLQS 263
Query: 311 KSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREI-------------------- 350
++L VF M + GV D T +L+AC +EG++I
Sbjct: 264 EALDVFRRMRAEGVGIDQYTFGSILTACGALAASEEGKQIHAYTIRTLYDGNIFVGSALV 323
Query: 351 --FESMKSKYLVEPKTEHYAC--------MVDLLGRAGQVEDAMKLIEAMP---FEPDAI 397
+ +S L E C M+ G+ G E+A+++ M +P+
Sbjct: 324 DMYSKCRSIRLAEAVFRRMTCKNIISWTAMIVGYGQNGCGEEAVRVFSEMQTDGIKPNDF 383
Query: 398 IWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSN----IYASQGRFHDVAELR 453
GS++ +C L E A+ PYI +S+ +Y G D L
Sbjct: 384 TLGSVISSCANLASL---EEGAQFHCMALVSGLRPYITVSSALVTLYGKCGSIEDAHRLF 440
Query: 454 KNM 456
M
Sbjct: 441 DEM 443
>gi|449485624|ref|XP_004157227.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g57430, chloroplastic-like [Cucumis sativus]
Length = 863
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 234/640 (36%), Positives = 358/640 (55%), Gaps = 48/640 (7%)
Query: 8 SWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKD 67
S A++ Y + G A +F+++P+ ++VSW ++ G + + D A +L M
Sbjct: 225 SANALLDMYAKSGCPEAAIAVFYEIPKPDIVSWNAVIAGCVLHEKNDLALKLLGKMGSYR 284
Query: 68 VVAQT---NMVLGYCQD-GRVDEGREIFDEMPKKNV----ISWTTMISGYVNNNRIDVAR 119
V + L C G V GR++ + K ++ +I Y + AR
Sbjct: 285 VAPSMFTLSSALKACAAIGLVKLGRQLHSALMKMDMEPDSFVGVGLIDMYSKCGLLQDAR 344
Query: 120 KLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAM--------------PMKSVVAS- 164
+F++MP K+ + W +++ GY+ CG +A LF M +KS S
Sbjct: 345 MVFDLMPXKDVIVWNSIISGYSNCGYDIEAMSLFTNMYKEGLEFNQTTLSTILKSTAGSQ 404
Query: 165 ------------------------NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIK 200
NS++ G+ ++ A VF+ +D ++ MI
Sbjct: 405 ANGFCEQVHTISIKSGYQYDGYVANSLLDSYGKCCLLEDAAKVFEVCPAEDLVAYTSMIT 464
Query: 201 VYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDV 260
Y + G E + ++ MQ ++ + S+ + CA+L++ + G+Q+H +++C
Sbjct: 465 AYSQYGLGEEALKMYLRMQDRDIKPDAFIFSSLFNACANLSAYEQGKQIHVHVLKCGLLS 524
Query: 261 DVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMF 320
DV+ + L+ MY KCG + IF+ + + IV W+++I G AQ+G G K+L++F++M
Sbjct: 525 DVFAGNSLVNMYAKCGSIDDASCIFNEISWRGIVSWSAMIGGLAQHGHGRKALQLFYQML 584
Query: 321 SSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQV 380
+G++P+ +TLV VLSAC++ G V E R F M+ + + P EHYACMVD+LGR G++
Sbjct: 585 KNGILPNHITLVSVLSACNHAGLVTEARRFFGLMEKLFGITPTQEHYACMVDILGRVGRL 644
Query: 381 EDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIY 440
++AM L++ MPF+ A +WG+LLGA R H ++L AA+ LL LEP+ +G +ILL+NIY
Sbjct: 645 DEAMVLVKEMPFQASAAVWGALLGAARIHKNIELGRHAAEMLLTLEPEKSGTHILLANIY 704
Query: 441 ASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKI 500
AS G + +VA++R++M+ V K PG SWIE++ KV+ F D SHP I L+ +
Sbjct: 705 ASTGMWDNVAKVRRSMKNSLVKKEPGMSWIELKDKVYTFIVGD-RSHPRSKEIYVKLDDL 763
Query: 501 GGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVC 560
L AGY P LHDV++ EK L +HSEKLAVA+GL+ P G PIRV KNLRVC
Sbjct: 764 RERLTSAGYVPMIETDLHDVEQIEKEQLLWHHSEKLAVAFGLIATPPGAPIRVKKNLRVC 823
Query: 561 GDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
DCH+A K ISKV REII+RD NRFHHF+DG CSC DYW
Sbjct: 824 IDCHTAFKFISKVASREIIVRDINRFHHFRDGSCSCGDYW 863
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 113/468 (24%), Positives = 214/468 (45%), Gaps = 68/468 (14%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQM----PEKNVVSWTVMLGGFIRDSRIDDARR 58
E ++VSW+A++ GYV+ G EA +++M + N +++ +L G ++ ++
Sbjct: 110 EPDLVSWSALISGYVQNGRGEEALLTYYEMYLLGAKGNEFTFSSVLKGCSLTRNLELGKQ 169
Query: 59 --------------------------------------------LFDMMPEKDVVAQTNM 74
L + + D + +
Sbjct: 170 IHRVALVTEMISTGISPNEFSLSTVLNACAGLEDENYGMKVHGYLIKLGYDSDPFSANAL 229
Query: 75 VLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKL------FEVMPEK 128
+ Y + G + +F E+PK +++SW +I+G V + + D+A KL + V P
Sbjct: 230 LDMYAKSGCPEAAIAVFYEIPKPDIVSWNAVIAGCVLHEKNDLALKLLGKMGSYRVAPSM 289
Query: 129 NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLG------QNGEVQKARV 182
+S + L G ++ +L A+ MK + +S + G+G + G +Q AR+
Sbjct: 290 FTLS--SALKACAAIGLVKLGRQLHSAL-MKMDMEPDSFV-GVGLIDMYSKCGLLQDARM 345
Query: 183 VFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLAS 242
VFD M KD W+ +I Y GY++E + LFT M KEG+ N +L ++L A +
Sbjct: 346 VFDLMPXKDVIVWNSIISGYSNCGYDIEAMSLFTNMYKEGLEFNQTTLSTILKSTAGSQA 405
Query: 243 LDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISG 302
QVH ++ + D YVA+ L+ Y KC L +F+ ++D+V + S+I+
Sbjct: 406 NGFCEQVHTISIKSGYQYDGYVANSLLDSYGKCCLLEDAAKVFEVCPAEDLVAYTSMITA 465
Query: 303 YAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREI-FESMKSKYLVE 361
Y+QYGLGE++LK++ M + PD + +AC+ ++G++I +K L +
Sbjct: 466 YSQYGLGEEALKMYLRMQDRDIKPDAFIFSSLFNACANLSAYEQGKQIHVHVLKCGLLSD 525
Query: 362 PKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTH 409
+ +V++ + G ++DA + + + + W +++G H
Sbjct: 526 VFAGN--SLVNMYAKCGSIDDASCIFNEISWR-GIVSWSAMIGGLAQH 570
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 100/401 (24%), Positives = 193/401 (48%), Gaps = 36/401 (8%)
Query: 56 ARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEM----PKKNVISWTTMISGYVN 111
AR+L E D+V+ + ++ GY Q+GR +E + EM K N ++++++ G
Sbjct: 101 ARKLVIDSSEPDLVSWSALISGYVQNGRGEEALLTYYEMYLLGAKGNEFTFSSVLKGCSL 160
Query: 112 NNRIDVARKLFEVM---------PEKNEVSWTAMLMGYTQCGRIQDA-------WELFKA 155
+++ +++ V NE S + +L C ++D L K
Sbjct: 161 TRNLELGKQIHRVALVTEMISTGISPNEFSLSTVL---NACAGLEDENYGMKVHGYLIKL 217
Query: 156 MPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIK---VYERKGYELEVI 212
++N+++ ++G + A VF ++ + D +W+ +I ++E+ L+
Sbjct: 218 GYDSDPFSANALLDMYAKSGCPEAAIAVFYEIPKPDIVSWNAVIAGCVLHEKNDLALK-- 275
Query: 213 DLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMY 272
L M V + +L S L CA++ + GRQ+H+ L++ + D +V LI MY
Sbjct: 276 -LLGKMGSYRVAPSMFTLSSALKACAAIGLVKLGRQLHSALMKMDMEPDSFVGVGLIDMY 334
Query: 273 IKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLV 332
KCG L +++FD KD+++WNSIISGY+ G +++ +F M+ G+ + TL
Sbjct: 335 SKCGLLQDARMVFDLMPXKDVIVWNSIISGYSNCGYDIEAMSLFTNMYKEGLEFNQTTLS 394
Query: 333 GVLSACSYTGKVKEGREIFE-SMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMP 391
+L + + + ++ S+KS Y + + ++D G+ +EDA K+ E P
Sbjct: 395 TILKSTAGSQANGFCEQVHTISIKSGYQYDGYVAN--SLLDSYGKCCLLEDAAKVFEVCP 452
Query: 392 FEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGP 432
E D + + S++ A + + L E A K L+++ ++ P
Sbjct: 453 AE-DLVAYTSMITA---YSQYGLGEEALKMYLRMQDRDIKP 489
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 141/292 (48%), Gaps = 34/292 (11%)
Query: 117 VARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGE 176
VARKL E + VSW+A++ GY Q GR ++A + M + LG G
Sbjct: 100 VARKLVIDSSEPDLVSWSALISGYVQNGRGEEALLTYYEMYL------------LGAKG- 146
Query: 177 VQKARVVFDQMREKDDATWSGMIKVYERK-----GYELEVIDLFTLMQKEGVRVNFPSLI 231
++ T+S ++K G ++ + L T M G+ N SL
Sbjct: 147 --------------NEFTFSSVLKGCSLTRNLELGKQIHRVALVTEMISTGISPNEFSLS 192
Query: 232 SVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASK 291
+VL+ CA L ++G +VH L++ +D D + A+ L+ MY K G +F
Sbjct: 193 TVLNACAGLEDENYGMKVHGYLIKLGYDSDPFSANALLDMYAKSGCPEAAIAVFYEIPKP 252
Query: 292 DIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIF 351
DIV WN++I+G + + +LK+ +M S V P TL L AC+ G VK GR++
Sbjct: 253 DIVSWNAVIAGCVLHEKNDLALKLLGKMGSYRVAPSMFTLSSALKACAAIGLVKLGRQLH 312
Query: 352 ESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
++ K +EP + ++D+ + G ++DA + + MP + D I+W S++
Sbjct: 313 SALM-KMDMEPDSFVGVGLIDMYSKCGLLQDARMVFDLMPXK-DVIVWNSII 362
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 103/229 (44%), Gaps = 48/229 (20%)
Query: 227 FPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGEL-VKGKLIF 285
+P L+ + ++S G +HA+++R + + + L+ +Y KC V KL+
Sbjct: 53 YPKLLLQFTASKDVSS---GMAIHARIIR---LGLLGLRNRLVNLYSKCQCFRVARKLVI 106
Query: 286 DNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVK 345
D+ + D+V W+++ISGY Q G GE++L ++EM+ G ++ T VL CS T ++
Sbjct: 107 DS-SEPDLVSWSALISGYVQNGRGEEALLTYYEMYLLGAKGNEFTFSSVLKGCSLTRNLE 165
Query: 346 EGREIFESMKSKYLVEP-------------------KTEHYA------------------ 368
G++I ++ + E+Y
Sbjct: 166 LGKQIHRVALVTEMISTGISPNEFSLSTVLNACAGLEDENYGMKVHGYLIKLGYDSDPFS 225
Query: 369 --CMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLA 415
++D+ ++G E A+ + +P +PD + W +++ C H K DLA
Sbjct: 226 ANALLDMYAKSGCPEAAIAVFYEIP-KPDIVSWNAVIAGCVLHEKNDLA 273
>gi|449453744|ref|XP_004144616.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449511814|ref|XP_004164061.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 681
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 220/608 (36%), Positives = 364/608 (59%), Gaps = 13/608 (2%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQM-----PEKNVVSWTVMLGGFIRDSRIDDAR 57
E +VSW +++ Y+E +A LF ++ P+ + +L G R + + +
Sbjct: 77 EPTLVSWNLLIKCYIENQRSNDAIALFCKLLCDFVPDS--FTLPCVLKGCARLGALQEGK 134
Query: 58 RLFDMMPE----KDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNN 113
++ ++ + D +++V Y + G ++ R++FD M K+V+SW ++I GY
Sbjct: 135 QIHGLVLKIGFGVDKFVLSSLVSMYSKCGEIELCRKVFDRMEDKDVVSWNSLIDGYARCG 194
Query: 114 RIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQ 173
I++A ++FE MPEK+ SWT ++ G ++ G+++ A ++F MP+++ V+ N+MI G +
Sbjct: 195 EIELALEMFEEMPEKDSFSWTILIDGLSKSGKLEAARDVFDRMPIRNSVSWNAMINGYMK 254
Query: 174 NGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISV 233
G+ A+ +FDQM E+ TW+ MI YER + + LF +M +E + N+ +++
Sbjct: 255 AGDSNTAKELFDQMPERSLVTWNSMITGYERNKQFTKALKLFEVMLREDISPNYTTILGA 314
Query: 234 LSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDI 293
+S + + SL GR VH+ +V+ F D + ++LI MY KCG + +F + K +
Sbjct: 315 VSAASGMVSLGTGRWVHSYIVKSGFKTDGVLGTLLIEMYSKCGSVKSALRVFRSIPKKKL 374
Query: 294 VMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFES 353
W S+I G +GL E++L++F EM +G+ P +T +GVL+ACS+ G ++ F+
Sbjct: 375 GHWTSVIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNACSHAGFAEDAHRYFKM 434
Query: 354 MKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLD 413
M Y ++P EHY C++D+L RAG +E+A IE MP + + +IW SLL R H +
Sbjct: 435 MTYDYGIKPSIEHYGCLIDVLCRAGHLEEAKDTIERMPIKANKVIWTSLLSGSRKHGNIR 494
Query: 414 LAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVE 473
+ E AA+ L+ L P G Y++LSN+YA+ G + V ++R+ M+K+ + K PGCS IE +
Sbjct: 495 MGEYAAQHLIDLAPDTTGCYVILSNMYAAAGLWEKVRQVREMMKKKGMKKDPGCSSIEHQ 554
Query: 474 KKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEE-EKVHSLRYH 532
+H F D SHP+ I L ++ L AG+ PD++ VL ++E+ EK L H
Sbjct: 555 GSIHEFIVGD-KSHPQTEEIYIKLCEMKKKLNVAGHIPDTTQVLLCLEEDNEKEAELETH 613
Query: 533 SEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDG 592
SE+LA+A+GL+ + G PIR++KNLR+C DCH+ KL+S + REII+RD +RFHHFK G
Sbjct: 614 SERLAIAFGLLNIKHGSPIRIIKNLRICNDCHAVTKLLSHIYNREIIIRDGSRFHHFKSG 673
Query: 593 LCSCRDYW 600
CSC+D+W
Sbjct: 674 SCSCKDFW 681
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 96/368 (26%), Positives = 184/368 (50%), Gaps = 26/368 (7%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
M +++VVSW +++ GY G I A +F +MPEK+ SWT+++ G + +++ AR +F
Sbjct: 175 MEDKDVVSWNSLIDGYARCGEIELALEMFEEMPEKDSFSWTILIDGLSKSGKLEAARDVF 234
Query: 61 DMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARK 120
D MP ++ V+ M+ GY + G + +E+FD+MP++++++W +MI+GY N + A K
Sbjct: 235 DRMPIRNSVSWNAMINGYMKAGDSNTAKELFDQMPERSLVTWNSMITGYERNKQFTKALK 294
Query: 121 LFEVMPEKN-EVSWTAMLMGYTQC--------GRIQDAWELFKAMPMKSVVASNSMILGL 171
LFEVM ++ ++T +L + GR ++ + V+ + +I
Sbjct: 295 LFEVMLREDISPNYTTILGAVSAASGMVSLGTGRWVHSYIVKSGFKTDGVLGT-LLIEMY 353
Query: 172 GQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLI 231
+ G V+ A VF + +K W+ +I G + ++LF M + G++ + + I
Sbjct: 354 SKCGSVKSALRVFRSIPKKKLGHWTSVIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFI 413
Query: 232 SVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVA--SVLITMYIKCGELVKGKLIFDNFA 289
VL+ C S A + +++ + + + LI + + G L + K +
Sbjct: 414 GVLNAC-SHAGFAEDAHRYFKMMTYDYGIKPSIEHYGCLIDVLCRAGHLEEAKDTIERMP 472
Query: 290 SK-DIVMWNSIISGYAQYG---LGEKSLKVFHEMFSSGVMPDD----VTLVGVLSACSYT 341
K + V+W S++SG ++G +GE + + ++ PD V L + +A
Sbjct: 473 IKANKVIWTSLLSGSRKHGNIRMGEYAAQHLIDL-----APDTTGCYVILSNMYAAAGLW 527
Query: 342 GKVKEGRE 349
KV++ RE
Sbjct: 528 EKVRQVRE 535
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 92/372 (24%), Positives = 152/372 (40%), Gaps = 93/372 (25%)
Query: 113 NRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVAS-------- 164
N + A LF+ + E VSW ++ Y + R DA LF + V S
Sbjct: 63 NNLQYAHSLFDWIQEPTLVSWNLLIKCYIENQRSNDAIALFCKLLCDFVPDSFTLPCVLK 122
Query: 165 --------------NSMILGLG----------------QNGEVQKARVVFDQMREKDDAT 194
+ ++L +G + GE++ R VFD+M +KD +
Sbjct: 123 GCARLGALQEGKQIHGLVLKIGFGVDKFVLSSLVSMYSKCGEIELCRKVFDRMEDKDVVS 182
Query: 195 WSGMIKVYERKGYELEV-IDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQL 253
W+ +I Y R G E+E+ +++F M E ++ LI LS L + R V ++
Sbjct: 183 WNSLIDGYARCG-EIELALEMFEEM-PEKDSFSWTILIDGLSKSGKLEA---ARDVFDRM 237
Query: 254 -VRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKS 312
+R + + +I Y+K G+ K +FD + +V WNS+I+GY + K+
Sbjct: 238 PIR-----NSVSWNAMINGYMKAGDSNTAKELFDQMPERSLVTWNSMITGYERNKQFTKA 292
Query: 313 LKVFHEMFSSGVMPDDVTLVGVLSACS--------------------------------- 339
LK+F M + P+ T++G +SA S
Sbjct: 293 LKLFEVMLREDISPNYTTILGAVSAASGMVSLGTGRWVHSYIVKSGFKTDGVLGTLLIEM 352
Query: 340 YT--GKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAM---PFEP 394
Y+ G VK +F S+ K K H+ ++ LG G VE ++L + M +P
Sbjct: 353 YSKCGSVKSALRVFRSIPKK-----KLGHWTSVIVGLGMHGLVEQTLELFDEMCRTGLKP 407
Query: 395 DAIIWGSLLGAC 406
AI + +L AC
Sbjct: 408 HAITFIGVLNAC 419
>gi|224131918|ref|XP_002328140.1| predicted protein [Populus trichocarpa]
gi|222837655|gb|EEE76020.1| predicted protein [Populus trichocarpa]
Length = 534
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 221/528 (41%), Positives = 329/528 (62%), Gaps = 8/528 (1%)
Query: 78 YCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEK----NEVSW 133
Y + G + + +++FD+MP +NV+SWTTMIS Y D A + +M + N ++
Sbjct: 10 YVKFGLLHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLREGVRPNMFTY 69
Query: 134 TAMLMGYTQCGRIQDAWELFKAMPMKS-VVASNSMILGLGQNGEVQKARVVFDQMREKDD 192
+++L ++ + + S V +++I + GE++ A VFD+M D
Sbjct: 70 SSVLRACDGLFNLRQLHCCIIKIGLDSDVFVRSALIDVYSRWGELENALRVFDEMVTGDL 129
Query: 193 ATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQ 252
WS +I + + E + LF M++ G +L SVL C LA L+ GRQVH
Sbjct: 130 VVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVLRACTGLALLELGRQVHVH 189
Query: 253 LVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKS 312
+++ +D D+ + + L+ MY KCG L +F KD++ W+++I+G AQ G +++
Sbjct: 190 VLK--YDQDLILNNALLDMYCKCGSLEDANAVFVRMVEKDVISWSTMIAGLAQNGYSKEA 247
Query: 313 LKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVD 372
LK+F M G+ P+ VT+VGVL ACS+ G V+EG F SMK + ++P EHY CM+D
Sbjct: 248 LKLFESMKVLGIKPNYVTIVGVLFACSHAGLVEEGLYYFHSMKELFGIDPGREHYGCMID 307
Query: 373 LLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGP 432
LLGRAG++ +A+ LI M EPDA+ W +LL ACR H +D+A AAK++L+L+P++AG
Sbjct: 308 LLGRAGRLSEAVDLINEMECEPDAVTWRALLNACRVHRNVDVAIHAAKQILRLDPQDAGT 367
Query: 433 YILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPM 492
Y+LLSNIYA+ R++DVAE+R+ M R + K PGCSWIEV K++H F D SHP+
Sbjct: 368 YVLLSNIYANTQRWNDVAEVRRTMTNRGIKKEPGCSWIEVSKQIHAFILGD-RSHPQIRE 426
Query: 493 IMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIR 552
I L ++ L GY PD++FVL D++ E+ SLRYHSEKLA+ +GL+ LP G IR
Sbjct: 427 INIQLNQLIYKLMGVGYVPDTNFVLQDLEGEQMQDSLRYHSEKLAIVFGLMSLPRGQTIR 486
Query: 553 VMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
+ KNLR+CGDCH KL++K+ R I++RD R+HHF+DGLCSC D+W
Sbjct: 487 IRKNLRICGDCHLFTKLLAKMEQRIIVIRDPVRYHHFQDGLCSCGDFW 534
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 125/277 (45%), Gaps = 42/277 (15%)
Query: 12 MVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMP------- 64
++ YV+ G++ +A +F +MP++NVVSWT M+ + D A +M
Sbjct: 6 LINMYVKFGLLHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLREGVRPN 65
Query: 65 -----------------------------EKDVVAQTNMVLGYCQDGRVDEGREIFDEMP 95
+ DV ++ ++ Y + G ++ +FDEM
Sbjct: 66 MFTYSSVLRACDGLFNLRQLHCCIIKIGLDSDVFVRSALIDVYSRWGELENALRVFDEMV 125
Query: 96 KKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKA 155
+++ W+++I+G+ N+ D A +LF+ M ++ L + EL +
Sbjct: 126 TGDLVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVLRACTGLALLELGRQ 185
Query: 156 MPM------KSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYEL 209
+ + + ++ +N+++ + G ++ A VF +M EKD +WS MI + GY
Sbjct: 186 VHVHVLKYDQDLILNNALLDMYCKCGSLEDANAVFVRMVEKDVISWSTMIAGLAQNGYSK 245
Query: 210 EVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHG 246
E + LF M+ G++ N+ +++ VL C+ ++ G
Sbjct: 246 EALKLFESMKVLGIKPNYVTIVGVLFACSHAGLVEEG 282
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 124/268 (46%), Gaps = 18/268 (6%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDM 62
+ +V +A++ Y G + A +F +M ++V W+ ++ GF ++S D+A RLF
Sbjct: 95 DSDVFVRSALIDVYSRWGELENALRVFDEMVTGDLVVWSSIIAGFAQNSDGDEALRLFKR 154
Query: 63 MPEKDVVAQTNM---VLGYCQD-GRVDEGREIFDEMPK--KNVISWTTMISGYVNNNRID 116
M +AQ VL C ++ GR++ + K +++I ++ Y ++
Sbjct: 155 MKRAGFLAQQTTLTSVLRACTGLALLELGRQVHVHVLKYDQDLILNNALLDMYCKCGSLE 214
Query: 117 VARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGL----G 172
A +F M EK+ +SW+ M+ G Q G ++A +LF++M + + + I+G+
Sbjct: 215 DANAVFVRMVEKDVISWSTMIAGLAQNGYSKEALKLFESMKVLGIKPNYVTIVGVLFACS 274
Query: 173 QNGEVQKARVVFDQMRE-----KDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNF 227
G V++ F M+E + MI + R G E +DL M+ E V +
Sbjct: 275 HAGLVEEGLYYFHSMKELFGIDPGREHYGCMIDLLGRAGRLSEAVDLINEMECEPDAVTW 334
Query: 228 PSLISVLSVCASLASLDHGRQVHAQLVR 255
+L L+ C ++D Q++R
Sbjct: 335 RAL---LNACRVHRNVDVAIHAAKQILR 359
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 73/143 (51%), Gaps = 5/143 (3%)
Query: 263 YVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSS 322
++ ++LI MY+K G L + +FD +++V W ++IS Y+ L +K+L+ M
Sbjct: 1 FLINILINMYVKFGLLHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLRE 60
Query: 323 GVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVED 382
GV P+ T VL AC +++ K ++ + ++D+ R G++E+
Sbjct: 61 GVRPNMFTYSSVLRACDGLFNLRQ----LHCCIIKIGLDSDVFVRSALIDVYSRWGELEN 116
Query: 383 AMKLIEAMPFEPDAIIWGSLLGA 405
A+++ + M D ++W S++
Sbjct: 117 ALRVFDEM-VTGDLVVWSSIIAG 138
>gi|49333376|gb|AAT64016.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 805
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 232/657 (35%), Positives = 367/657 (55%), Gaps = 68/657 (10%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
M ++NV W MV Y + G E+ LF M EK I R + A LF
Sbjct: 160 MEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKG-----------IEGKRPESAFELF 208
Query: 61 DMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMP------------------------- 95
D + ++DV++ +M+ GY +G + G I+ +M
Sbjct: 209 DKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLS 268
Query: 96 --------------KKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYT 141
++ + T++ Y +D A ++FE M E+N VSWT+M+ GYT
Sbjct: 269 LGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYT 328
Query: 142 QCGRIQDAWELFKAMPMKSV----VASNSMILGLGQNGEVQKARVVFDQMR----EKDDA 193
+ GR A +L + M + V VA S++ ++G + + V D ++ E +
Sbjct: 329 RDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMESNLF 388
Query: 194 TWSGMIKVYERKGYELEVIDLFTLMQKEGV----------RVNFPSLISVLSVCASLASL 243
+ ++ +Y + G +F+ M + + + + ++ VL CASL++L
Sbjct: 389 VCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMIGELKPDSRTMACVLPACASLSAL 448
Query: 244 DHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGY 303
+ G+++H ++R + D +VA+ L+ +Y+KCG L +L+FD SKD+V W +I+GY
Sbjct: 449 ERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGY 508
Query: 304 AQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPK 363
+G G +++ F+EM +G+ PD+V+ + +L ACS++G +++G F MK+ + +EPK
Sbjct: 509 GMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPK 568
Query: 364 TEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLL 423
EHYACMVDLL R G + A + IE +P PDA IWG+LL CR + ++LAE A+++
Sbjct: 569 LEHYACMVDLLSRTGNLSKAYEFIETLPIAPDATIWGALLCGCRNYHDIELAEKVAERVF 628
Query: 424 QLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRD 483
+LEP+N+G Y+LL+NIYA ++ +V LR+ + K+ + K PGCSWIE++ KV++F +
Sbjct: 629 ELEPENSGYYVLLANIYAEAEKWEEVKRLREKIGKQGLRKNPGCSWIEIKGKVNLFVSGN 688
Query: 484 CVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLV 543
SHP I +L+K+ ++E G+ P + + L + DE +K +L HSEKLA+A+GL+
Sbjct: 689 NSSHPHSKNIESLLKKMRRKMKEEGHFPKTKYALINADEMQKEMALCGHSEKLAMAFGLL 748
Query: 544 KLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
LP IRV KNLRVCGDCH K +SK REI+LRD NRFHHFKDG CSCR +W
Sbjct: 749 TLPPRKTIRVTKNLRVCGDCHEMAKFMSKETRREIVLRDPNRFHHFKDGYCSCRGFW 805
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 102/388 (26%), Positives = 182/388 (46%), Gaps = 57/388 (14%)
Query: 53 IDDARRLFDMMPEKDVVAQTNMVLGYCQDG--------------------RVDEGREIFD 92
+ + RR+FD M +K+V MV Y + G R + E+FD
Sbjct: 150 LKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESAFELFD 209
Query: 93 EMPKKNVISWTTMISGYVNNNRIDVARKLFEVM----PEKNEVSWTAMLMGYTQCGRIQD 148
++ ++VISW +MISGYV+N + +++ M + + + ++L+G G +
Sbjct: 210 KLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSL 269
Query: 149 AWELFKAMPMKS-----VVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYE 203
+ ++ +KS + SN+++ + G++ A VF++M E++ +W+ MI Y
Sbjct: 270 G-KAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYT 328
Query: 204 RKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVY 263
R G I L M+KEGV+++ ++ S+L CA SLD+G+ VH + + +++
Sbjct: 329 RDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMESNLF 388
Query: 264 VASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSG 323
V + L+ MY KCG + +F KDI+ WN++I GE
Sbjct: 389 VCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMI--------GE------------- 427
Query: 324 VMPDDVTLVGVLSACSYTGKVKEGREIFES-MKSKYLVEPKTEHYA-CMVDLLGRAGQVE 381
+ PD T+ VL AC+ ++ G+EI +++ Y H A +VDL + G +
Sbjct: 428 LKPDSRTMACVLPACASLSALERGKEIHGYILRNGY---SSDRHVANALVDLYVKCGVLG 484
Query: 382 DAMKLIEAMPFEPDAIIWGSLLGACRTH 409
A L + +P D + W ++ H
Sbjct: 485 LARLLFDMIP-SKDLVSWTVMIAGYGMH 511
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 104/244 (42%), Gaps = 57/244 (23%)
Query: 232 SVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFD----- 286
SVL +CA L S G++VH+ + VD + L++ Y CG+L +G+ +FD
Sbjct: 104 SVLQLCAGLKSFTDGKKVHSIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTMEKK 163
Query: 287 -----NF-----------------------------------------ASKDIVMWNSII 300
NF +D++ WNS+I
Sbjct: 164 NVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMI 223
Query: 301 SGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLV 360
SGY GL E+ L ++ +M G+ D T++ VL C+ +G + G+ + S+ K
Sbjct: 224 SGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAV-HSLAIKSSF 282
Query: 361 EPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAK 420
E + ++D+ + G ++ A+++ E M E + + W S++ + D A
Sbjct: 283 ERRINFSNTLLDMYSKCGDLDGALRVFEKMG-ERNVVSWTSMIAGYTRDGRSD----GAI 337
Query: 421 KLLQ 424
KLLQ
Sbjct: 338 KLLQ 341
>gi|359489080|ref|XP_002264194.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Vitis vinifera]
Length = 889
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 229/617 (37%), Positives = 366/617 (59%), Gaps = 21/617 (3%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM-----PEKNVVSWTVMLGGFIRDSRIDD 55
M R+ VSW M+ GY + G+ E+ LF +M P+ ++ + G + D ++
Sbjct: 277 MVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVNQFKPDLLTITSILQACGHLGD--LEF 334
Query: 56 ARRLFDMMP----EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVN 111
+ + D M E D A ++ Y + G + +E+F M K+ +SW +MI+ Y+
Sbjct: 335 GKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQ 394
Query: 112 NNRIDVARKLFEVMP---EKNEVSWTAMLMGYTQCGRIQDAWEL---FKAMPMKS-VVAS 164
N D A KLF++M + + V++ +L TQ G + EL M S +V S
Sbjct: 395 NGSFDEAMKLFKMMKTDVKPDSVTYVMLLSMSTQLGDLHLGKELHCDLAKMGFNSNIVVS 454
Query: 165 NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVR 224
N+++ + GE+ + VF+ M+ +D TW+ +I + + + M+ EGV
Sbjct: 455 NTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVT 514
Query: 225 VNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLI 284
+ +++S+L VC+ LA+ G+++H + + + DV V +VLI MY KCG L +
Sbjct: 515 PDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQV 574
Query: 285 FDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKV 344
F +KD+V W ++IS YG G+K+++ F EM ++G++PD V V ++ ACS++G V
Sbjct: 575 FKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSGLV 634
Query: 345 KEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLG 404
+EG F MK Y +EP+ EHYAC+VDLL R+ ++ A I +MP +PD+ IWG+LL
Sbjct: 635 EEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSMPLKPDSSIWGALLS 694
Query: 405 ACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKP 464
ACR ++AE ++++++L P + G Y+L+SNIYA+ G++ V +RK+++ R + K
Sbjct: 695 ACRMSGDTEIAERVSERIIELNPDDTGYYVLVSNIYAALGKWDQVRSIRKSIKARGLKKD 754
Query: 465 PGCSWIEVEKKVHMF-TGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEE 523
PGCSW+E++ KV++F TG E + ++L + GL+ + GY + FVLHD+DE+
Sbjct: 755 PGCSWMEIQNKVYVFGTGTKFFEQFEE--VNKLLGMLAGLMAKEGYIANLQFVLHDIDED 812
Query: 524 EKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDA 583
EK L HSE+LA+A+GL+ G P++VMKNLRVC DCH+ K ISK++ RE+++RDA
Sbjct: 813 EKRDILCGHSERLAIAFGLLNTKPGTPLQVMKNLRVCEDCHTVTKYISKIVQRELLVRDA 872
Query: 584 NRFHHFKDGLCSCRDYW 600
NRFH FKDG CSC DYW
Sbjct: 873 NRFHVFKDGACSCGDYW 889
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 109/421 (25%), Positives = 208/421 (49%), Gaps = 18/421 (4%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRD----SRIDDA 56
MP R+VVSW +++ GY G EA ++++ VV + + +R +++
Sbjct: 176 MPLRDVVSWNSLISGYNANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEG 235
Query: 57 RRLFDMMP----EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+ ++ +KDV+ ++ YC+ + +GR IFD+M ++ +SW TMI GY
Sbjct: 236 DIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQV 295
Query: 113 NRIDVARKLFEVMPEK---NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKS----VVASN 165
+ + KLF M + + ++ T++L G ++ + M ASN
Sbjct: 296 GLYEESIKLFMEMVNQFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASN 355
Query: 166 SMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRV 225
+I + G + ++ VF M+ KD +W+ MI VY + G E + LF +M K V+
Sbjct: 356 ILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGSFDEAMKLFKMM-KTDVKP 414
Query: 226 NFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIF 285
+ + + +LS+ L L G+++H L + F+ ++ V++ L+ MY KCGE+ +F
Sbjct: 415 DSVTYVMLLSMSTQLGDLHLGKELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVF 474
Query: 286 DNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVK 345
+N ++DI+ WN+II+ L++ M + GV PD T++ +L CS +
Sbjct: 475 ENMKARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKR 534
Query: 346 EGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
+G+EI + K +E ++++ + G + ++ ++ + M D + W +L+ A
Sbjct: 535 QGKEIHGCI-FKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMK-TKDVVTWTALISA 592
Query: 406 C 406
C
Sbjct: 593 C 593
Score = 168 bits (425), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 117/426 (27%), Positives = 215/426 (50%), Gaps = 30/426 (7%)
Query: 2 PERNVVSWTAMVRGYVEEGMITEAGTLFWQM------PEK----NVVSWTVMLGGFIRDS 51
P NV W +++R G+ +EA +L+ + P+ +V++ L F
Sbjct: 76 PSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAK 135
Query: 52 RIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVN 111
I D R+ DM D+ ++ YC+ +D+ R++F+EMP ++V+SW ++ISGY
Sbjct: 136 SIHD--RVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNA 193
Query: 112 NNRIDVARKLFE------VMPEKNEVSWTAMLMGYTQCGRIQDA---WELFKAMPMKSVV 162
N + A +++ V+P+ +S ++L G +++ L + + +K V
Sbjct: 194 NGYWNEALEIYYRFRNLGVVPDSYTMS--SVLRACGGLGSVEEGDIIHGLIEKIGIKKDV 251
Query: 163 ASNSMILGL--GQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQK 220
N+ +L + NG + R +FD+M +D +W+ MI Y + G E I LF M
Sbjct: 252 IVNNGLLSMYCKFNGLID-GRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVN 310
Query: 221 EGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVK 280
+ + + ++ S+L C L L+ G+ VH ++ ++ D +++LI MY KCG L+
Sbjct: 311 Q-FKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLA 369
Query: 281 GKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSY 340
+ +F KD V WNS+I+ Y Q G ++++K+F +M + V PD VT V +LS +
Sbjct: 370 SQEVFSGMKCKDSVSWNSMINVYIQNGSFDEAMKLF-KMMKTDVKPDSVTYVMLLSMSTQ 428
Query: 341 TGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWG 400
G + G+E+ + +K +VD+ + G++ D++K+ E M D I W
Sbjct: 429 LGDLHLGKELHCDL-AKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMK-ARDIITWN 486
Query: 401 SLLGAC 406
+++ +C
Sbjct: 487 TIIASC 492
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 118/479 (24%), Positives = 211/479 (44%), Gaps = 89/479 (18%)
Query: 95 PKKNVISWTTMISGYVNNNRIDVARKLFE------VMPEK----NEVSWTAMLMGYTQCG 144
P NV W ++I +N A L+ + P+ + ++ A L+ +
Sbjct: 76 PSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAK 135
Query: 145 RIQDAWELFKAMPM---KSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKV 201
I D + + M + N++I + ++ KAR VF++M +D +W+ +I
Sbjct: 136 SIHD-----RVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISG 190
Query: 202 YERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVD 261
Y GY E ++++ + GV + ++ SVL C L S++ G +H + + D
Sbjct: 191 YNANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKD 250
Query: 262 VYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFS 321
V V + L++MY K L+ G+ IFD +D V WN++I GY+Q GL E+S+K+F EM +
Sbjct: 251 VIVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVN 310
Query: 322 SGVMPDDVTLVGVLSACSYTGKVKEGR--------------------------------- 348
PD +T+ +L AC + G ++ G+
Sbjct: 311 Q-FKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLA 369
Query: 349 --EIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMP--FEPDAIIWGSLLG 404
E+F MK K V + M+++ + G ++AMKL + M +PD++ + LL
Sbjct: 370 SQEVFSGMKCKDSVS-----WNSMINVYIQNGSFDEAMKLFKMMKTDVKPDSVTYVMLLS 424
Query: 405 ACRTHMKLDLAEVAAKKLLQLEPKNAG--PYILLSN----IYASQGRFHDVAELRKNMRK 458
M L ++ K L + G I++SN +YA G D ++ +NM+
Sbjct: 425 -----MSTQLGDLHLGKELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKA 479
Query: 459 RNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVL 517
R++I +W + CV + + +RM+ + +R G PD + +L
Sbjct: 480 RDII-----TWNTIIAS--------CVHSEDCNLGLRMISR----MRTEGVTPDMATML 521
>gi|414885949|tpg|DAA61963.1| TPA: hypothetical protein ZEAMMB73_954210 [Zea mays]
Length = 633
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 206/543 (37%), Positives = 329/543 (60%), Gaps = 12/543 (2%)
Query: 67 DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN----NRIDVARKLF 122
D +++ YC+ G V + R +FD+MP ++V+SWT +I+GY N I + +
Sbjct: 94 DAFLLNSLIHMYCKCGAVSDARHVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDML 153
Query: 123 EVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMK-----SVVASNSMILGLGQNGEV 177
N ++T++L CG E A+ +K V ++++ + ++
Sbjct: 154 RARFRPNGFTFTSLLKATGACGGCSIG-EQMHALAVKYNWDEDVYVGSALLDMYARCEQM 212
Query: 178 QKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVC 237
A +VFD++ K++ +W+ +I + RK + F MQ+ G + S+ S
Sbjct: 213 DMAIMVFDRLVSKNEVSWNALIAGFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAF 272
Query: 238 ASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWN 297
A + +L+ GR VHA L++ + +V + ++ MY K G +V + +FD +D+V WN
Sbjct: 273 ARIGALEQGRWVHAHLIKSGQKLTAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWN 332
Query: 298 SIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSK 357
++++ AQYGLG++++ F E+ G+ + +T + VL+ACS+ G VKEG+ F+ MK
Sbjct: 333 TMLTALAQYGLGKEAVAHFEEIRKCGIQLNQITFLSVLTACSHGGLVKEGKHYFDMMKD- 391
Query: 358 YLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEV 417
Y V+P+ +HY VDLLGRAG +++A+ + MP EP A +WG+LLGACR H + +
Sbjct: 392 YNVQPEIDHYVSFVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALLGACRMHKNAKMGQY 451
Query: 418 AAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVH 477
AA + +L+P + GP +LL NIYAS G+++D A +RK M+ V K P CSW+++E VH
Sbjct: 452 AADHVFELDPDDTGPPVLLYNIYASTGKWNDAARVRKMMKATGVKKEPACSWVQIENSVH 511
Query: 478 MFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLA 537
MF D +HP+ I RM E+I +++AGY P+++ VL ++E+E+ L+YHSEK+A
Sbjct: 512 MFVADD-DTHPKSGDIYRMWEEINMRIKKAGYVPNTAHVLLHINEQERETKLKYHSEKIA 570
Query: 538 VAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCR 597
+A+ L+ +P G IR+MKN+R+CGDCHSA K +SKV REI++RD NRFHHF +G CSC
Sbjct: 571 LAFALINMPAGASIRIMKNIRICGDCHSAFKYVSKVFKREIVVRDTNRFHHFSEGSCSCG 630
Query: 598 DYW 600
DYW
Sbjct: 631 DYW 633
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 140/305 (45%), Gaps = 25/305 (8%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEK----NVVSWTVML------GGFIRD 50
MP R+VVSWT ++ GY + M EA L M N ++T +L GG
Sbjct: 121 MPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFTFTSLLKATGACGGCSIG 180
Query: 51 SRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYV 110
++ ++ ++DV + ++ Y + ++D +FD + KN +SW +I+G+
Sbjct: 181 EQMHALAVKYNW--DEDVYVGSALLDMYARCEQMDMAIMVFDRLVSKNEVSWNALIAGFA 238
Query: 111 NNNRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRI-QDAW---ELFKAMPMKSVV 162
+ F M ++++M + + G + Q W L K+ +
Sbjct: 239 RKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRWVHAHLIKSGQKLTAF 298
Query: 163 ASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEG 222
N+M+ ++G + AR VFD+M ++D TW+ M+ + G E + F ++K G
Sbjct: 299 VGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQYGLGKEAVAHFEEIRKCG 358
Query: 223 VRVNFPSLISVLSVCASLASLDHGRQVHAQL--VRCQFDVDVYVASVLITMYIKCGELVK 280
+++N + +SVL+ C+ + G+ + Q ++D YV+ + + + G L+K
Sbjct: 359 IQLNQITFLSVLTACSHGGLVKEGKHYFDMMKDYNVQPEIDHYVS--FVDLLGRAG-LLK 415
Query: 281 GKLIF 285
LIF
Sbjct: 416 EALIF 420
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 86/173 (49%), Gaps = 2/173 (1%)
Query: 232 SVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASK 291
S+++ CA +L R +HA L R D ++ + LI MY KCG + + +FD S+
Sbjct: 65 SIIAACAQFKNLAGARAIHAHLSRSCLAGDAFLLNSLIHMYCKCGAVSDARHVFDKMPSR 124
Query: 292 DIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIF 351
D+V W +I+GYAQ + +++ + +M + P+ T +L A G G ++
Sbjct: 125 DVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFTFTSLLKATGACGGCSIGEQM- 183
Query: 352 ESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLG 404
++ KY + + ++D+ R Q++ A+ + + + + + W +L+
Sbjct: 184 HALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRL-VSKNEVSWNALIA 235
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 65/141 (46%), Gaps = 14/141 (9%)
Query: 41 TVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPK---- 96
MLG + + + DAR++FD M ++D+V M+ Q G E F+E+ K
Sbjct: 301 NTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQYGLGKEAVAHFEEIRKCGIQ 360
Query: 97 KNVISWTTMISGYVNNNRIDVARKLFEVMPEKN-------EVSWTAMLMGYTQCGRIQDA 149
N I++ ++++ + + + F++M + N VS+ +L + G +++A
Sbjct: 361 LNQITFLSVLTACSHGGLVKEGKHYFDMMKDYNVQPEIDHYVSFVDLL---GRAGLLKEA 417
Query: 150 WELFKAMPMKSVVASNSMILG 170
MPM+ A +LG
Sbjct: 418 LIFVFKMPMEPTAAVWGALLG 438
>gi|57899529|dbj|BAD87043.1| vegetative storage protein-like [Oryza sativa Japonica Group]
Length = 698
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 233/652 (35%), Positives = 359/652 (55%), Gaps = 63/652 (9%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRID--------------- 54
TA++ YV+ + +A +F MP +++V+W ML G+
Sbjct: 49 TALLDMYVKCACLPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHR 108
Query: 55 ---DARRLFDMMP---EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISG 108
+A L ++P ++ +AQ V YC + R ++ V+ T ++
Sbjct: 109 LRPNASTLVALLPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKL-TDGVLLGTALLDM 167
Query: 109 YVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSV------- 161
Y + AR++F+ MP +NEV+W+A++ G+ C R+ A+ LFKAM + +
Sbjct: 168 YAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTS 227
Query: 162 ---------------------------------VASNSMILGLGQNGEVQKARVVFDQMR 188
A NS++ + G + +A +FD+M
Sbjct: 228 IASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMA 287
Query: 189 EKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQ 248
KD ++S ++ Y + G E +F MQ V + +++S++ C+ LA+L HGR
Sbjct: 288 VKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRC 347
Query: 249 VHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGL 308
H ++ + + + LI MY KCG + + +F+ S+DIV WN++I+GY +GL
Sbjct: 348 SHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGL 407
Query: 309 GEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYA 368
G+++ +F EM + G PD VT + +LSACS++G V EG+ F M Y + P+ EHY
Sbjct: 408 GKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYI 467
Query: 369 CMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPK 428
CMVDLL R G +++A + I++MP D +W +LLGACR + +DL + ++ + +L P+
Sbjct: 468 CMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPE 527
Query: 429 NAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHP 488
G ++LLSNIY++ GRF + AE+R + + K PGCSWIE+ +H F G D SHP
Sbjct: 528 GTGNFVLLSNIYSAAGRFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGD-QSHP 586
Query: 489 EHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEG 548
+ P I R L+ I +++ GY PD+SFVL D++EEEK +L HSEKLA+AYG++ L E
Sbjct: 587 QSPEIYRELDNILVGIKKLGYQPDTSFVLQDLEEEEKEKALICHSEKLAIAYGILSLSED 646
Query: 549 VPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
I V KNLRVCGDCH+ IK IS V R II+RDANRFHHFK+G CSC D+W
Sbjct: 647 KTIFVTKNLRVCGDCHTVIKHISLVKRRAIIVRDANRFHHFKNGQCSCGDFW 698
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 89/368 (24%), Positives = 172/368 (46%), Gaps = 27/368 (7%)
Query: 65 EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN--------NRID 116
+ D+ T ++ Y + + + IF MP +++++W M++GY ++ + +
Sbjct: 42 QADLFVSTALLDMYVKCACLPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLS 101
Query: 117 VARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELF--------------KAMPMKSVV 162
+ ++ + P N + A+L Q G + + K+ V+
Sbjct: 102 MQMQMHRLRP--NASTLVALLPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVL 159
Query: 163 ASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEG 222
+++ + G + AR VFD M +++ TWS +I + + LF M +G
Sbjct: 160 LGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQG 219
Query: 223 VRVNFP-SLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKG 281
+ P S+ S L CASL L G Q+HA L + D+ + L++MY K G + +
Sbjct: 220 LCFLSPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQA 279
Query: 282 KLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYT 341
+FD A KD V +++++SGY Q G E++ VF +M + V PD T+V ++ ACS+
Sbjct: 280 IALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHL 339
Query: 342 GKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGS 401
++ GR S+ + L +T ++D+ + G+++ + ++ MP D + W +
Sbjct: 340 AALQHGRCSHGSVIIRGLAS-ETSICNALIDMYAKCGRIDLSRQVFNMMP-SRDIVSWNT 397
Query: 402 LLGACRTH 409
++ H
Sbjct: 398 MIAGYGIH 405
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 126/294 (42%), Gaps = 58/294 (19%)
Query: 2 PERN--------VVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRI 53
P RN V+ TA++ Y + G + A +F MP +N V+W+ ++GGF+ SR+
Sbjct: 146 PNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRM 205
Query: 54 DDARRLFDMMPEK----------------------------------------DVVAQTN 73
A LF M + D+ A +
Sbjct: 206 TQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNS 265
Query: 74 MVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMP----EKN 129
++ Y + G +D+ +FDEM K+ +S++ ++SGYV N R + A +F+ M E +
Sbjct: 266 LLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPD 325
Query: 130 EVSWTAML-----MGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVF 184
+ +++ + Q GR + + + ++ + N++I + G + +R VF
Sbjct: 326 AATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSIC-NALIDMYAKCGRIDLSRQVF 384
Query: 185 DQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCA 238
+ M +D +W+ MI Y G E LF M G + + I +LS C+
Sbjct: 385 NMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACS 438
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 93/198 (46%), Gaps = 12/198 (6%)
Query: 218 MQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGE 277
M + V N + L C++LA GR +H + D++V++ L+ MY+KC
Sbjct: 1 MLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCAC 60
Query: 278 LVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLK--VFHEMFSSGVMPDDVTLVGVL 335
L IF ++D+V WN++++GYA +G+ ++ + +M + P+ TLV +L
Sbjct: 61 LPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALL 120
Query: 336 SACSYTGKVKEGREIFE---------SMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKL 386
+ G + +G + + SK + ++D+ + G + A ++
Sbjct: 121 PLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRV 180
Query: 387 IEAMPFEPDAIIWGSLLG 404
+AMP + + W +L+G
Sbjct: 181 FDAMPAR-NEVTWSALIG 197
>gi|51090919|dbj|BAD35524.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|51090953|dbj|BAD35556.1| selenium-binding protein-like [Oryza sativa Japonica Group]
Length = 615
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 223/544 (40%), Positives = 335/544 (61%), Gaps = 16/544 (2%)
Query: 68 VVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNR----IDVARKLFE 123
V T +V Y + G +D+ R + D MP+++V+SWTTMISGY R +D+ K+
Sbjct: 77 VFLGTRLVTMYVRCGALDDARNVLDRMPERSVVSWTTMISGYSQTERHVEALDLFIKMLR 136
Query: 124 VMPEKNEVSWTAMLMGYTQCGRIQDAWE-------LFKAMPMKSVVASNSMILGLGQNGE 176
NE + +L T C Q ++ L K + +S++ ++
Sbjct: 137 AGCIPNEYTLATVL---TSCSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSEN 193
Query: 177 VQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSV 236
+Q+AR VFD + E+D + + +I Y +KG + E +DLF + EG++ N + ++++
Sbjct: 194 IQEARRVFDTLPERDVVSCTAIISGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTA 253
Query: 237 CASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMW 296
+ LASLD+G+QVHA ++R + V + + LI MY KCG+L+ + +FDN + +V W
Sbjct: 254 LSGLASLDYGKQVHALILRKELPFFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSW 313
Query: 297 NSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKS 356
N+++ GY ++GLG + + +F ++ V PD VTL+ VLS CS+ G V EG +IF+++
Sbjct: 314 NAMLMGYGRHGLGHEVISLFKDLHKE-VKPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVK 372
Query: 357 KYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAE 416
+ T HY C++DLLGR+G++E A+ LIE MPFE IWGSLLGACR H + + E
Sbjct: 373 EQSALLHTGHYGCIIDLLGRSGRLEKALNLIENMPFESTPSIWGSLLGACRVHANVHVGE 432
Query: 417 VAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKV 476
+ A+KLL++EP+NAG Y++LSNIYA+ G + DV ++RK M ++ V K PG SWI ++K +
Sbjct: 433 LVAQKLLEMEPENAGNYVILSNIYAAAGMWKDVFKVRKLMLEKTVTKEPGQSWIILDKVI 492
Query: 477 HMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKL 536
H F + HP I +++I ++ AG+ PD S VLHDVD+E+K L HSEKL
Sbjct: 493 HTFHSSERF-HPSKKDINAKIKEIFVDIKAAGFVPDLSCVLHDVDDEQKERMLLGHSEKL 551
Query: 537 AVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSC 596
A+ +GL+ P G+ IRVMKNLR+C DCH+ K +SKV REI LRD NRFH G C+C
Sbjct: 552 AITFGLMNTPPGLTIRVMKNLRICVDCHNFAKFVSKVYEREISLRDKNRFHLLTHGNCTC 611
Query: 597 RDYW 600
DYW
Sbjct: 612 GDYW 615
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 142/296 (47%), Gaps = 50/296 (16%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMM------ 63
T +V YV G + +A + +MPE++VVSWT M+ G+ + R +A LF M
Sbjct: 81 TRLVTMYVRCGALDDARNVLDRMPERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCI 140
Query: 64 PEKDVVA---------------------------QTNMVLG------YCQDGRVDEGREI 90
P + +A +++M +G Y + + E R +
Sbjct: 141 PNEYTLATVLTSCSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRV 200
Query: 91 FDEMPKKNVISWTTMISGY----VNNNRIDVARKLFEVMPEKNEVSWTAMLMGYT----- 141
FD +P+++V+S T +ISGY ++ +D+ R+L+ + N V++T ++ +
Sbjct: 201 FDTLPERDVVSCTAIISGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASL 260
Query: 142 QCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKV 201
G+ A L K +P V NS+I + G++ +R VFD M E+ +W+ M+
Sbjct: 261 DYGKQVHALILRKELPF-FVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMG 319
Query: 202 YERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQ 257
Y R G EVI LF + KE V+ + +L++VLS C+ +D G + +V+ Q
Sbjct: 320 YGRHGLGHEVISLFKDLHKE-VKPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQ 374
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 96/174 (55%), Gaps = 1/174 (0%)
Query: 218 MQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGE 277
M G F + ++ C +L GRQVHA+++ ++ V++ + L+TMY++CG
Sbjct: 33 MALPGASARFHEYEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGA 92
Query: 278 LVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSA 337
L + + D + +V W ++ISGY+Q ++L +F +M +G +P++ TL VL++
Sbjct: 93 LDDARNVLDRMPERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTS 152
Query: 338 CSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMP 391
CS + +G+++ S+ K E + ++D+ ++ +++A ++ + +P
Sbjct: 153 CSGPQSIYQGKQV-HSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLP 205
>gi|125597850|gb|EAZ37630.1| hypothetical protein OsJ_21964 [Oryza sativa Japonica Group]
Length = 583
Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust.
Identities = 223/544 (40%), Positives = 335/544 (61%), Gaps = 16/544 (2%)
Query: 68 VVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNR----IDVARKLFE 123
V T +V Y + G +D+ R + D MP+++V+SWTTMISGY R +D+ K+
Sbjct: 45 VFLGTRLVTMYVRCGALDDARNVLDRMPERSVVSWTTMISGYSQTERHVEALDLFIKMLR 104
Query: 124 VMPEKNEVSWTAMLMGYTQCGRIQDAWE-------LFKAMPMKSVVASNSMILGLGQNGE 176
NE + +L T C Q ++ L K + +S++ ++
Sbjct: 105 AGCIPNEYTLATVL---TSCSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSEN 161
Query: 177 VQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSV 236
+Q+AR VFD + E+D + + +I Y +KG + E +DLF + EG++ N + ++++
Sbjct: 162 IQEARRVFDTLPERDVVSCTAIISGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTA 221
Query: 237 CASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMW 296
+ LASLD+G+QVHA ++R + V + + LI MY KCG+L+ + +FDN + +V W
Sbjct: 222 LSGLASLDYGKQVHALILRKELPFFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSW 281
Query: 297 NSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKS 356
N+++ GY ++GLG + + +F ++ V PD VTL+ VLS CS+ G V EG +IF+++
Sbjct: 282 NAMLMGYGRHGLGHEVISLFKDLHKE-VKPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVK 340
Query: 357 KYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAE 416
+ T HY C++DLLGR+G++E A+ LIE MPFE IWGSLLGACR H + + E
Sbjct: 341 EQSALLHTGHYGCIIDLLGRSGRLEKALNLIENMPFESTPSIWGSLLGACRVHANVHVGE 400
Query: 417 VAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKV 476
+ A+KLL++EP+NAG Y++LSNIYA+ G + DV ++RK M ++ V K PG SWI ++K +
Sbjct: 401 LVAQKLLEMEPENAGNYVILSNIYAAAGMWKDVFKVRKLMLEKTVTKEPGQSWIILDKVI 460
Query: 477 HMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKL 536
H F + HP I +++I ++ AG+ PD S VLHDVD+E+K L HSEKL
Sbjct: 461 HTFHSSERF-HPSKKDINAKIKEIFVDIKAAGFVPDLSCVLHDVDDEQKERMLLGHSEKL 519
Query: 537 AVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSC 596
A+ +GL+ P G+ IRVMKNLR+C DCH+ K +SKV REI LRD NRFH G C+C
Sbjct: 520 AITFGLMNTPPGLTIRVMKNLRICVDCHNFAKFVSKVYEREISLRDKNRFHLLTHGNCTC 579
Query: 597 RDYW 600
DYW
Sbjct: 580 GDYW 583
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 142/296 (47%), Gaps = 50/296 (16%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMM------ 63
T +V YV G + +A + +MPE++VVSWT M+ G+ + R +A LF M
Sbjct: 49 TRLVTMYVRCGALDDARNVLDRMPERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCI 108
Query: 64 PEKDVVA---------------------------QTNMVLG------YCQDGRVDEGREI 90
P + +A +++M +G Y + + E R +
Sbjct: 109 PNEYTLATVLTSCSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRV 168
Query: 91 FDEMPKKNVISWTTMISGY----VNNNRIDVARKLFEVMPEKNEVSWTAMLMGYT----- 141
FD +P+++V+S T +ISGY ++ +D+ R+L+ + N V++T ++ +
Sbjct: 169 FDTLPERDVVSCTAIISGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASL 228
Query: 142 QCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKV 201
G+ A L K +P V NS+I + G++ +R VFD M E+ +W+ M+
Sbjct: 229 DYGKQVHALILRKELPF-FVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMG 287
Query: 202 YERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQ 257
Y R G EVI LF + KE V+ + +L++VLS C+ +D G + +V+ Q
Sbjct: 288 YGRHGLGHEVISLFKDLHKE-VKPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQ 342
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 96/174 (55%), Gaps = 1/174 (0%)
Query: 218 MQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGE 277
M G F + ++ C +L GRQVHA+++ ++ V++ + L+TMY++CG
Sbjct: 1 MALPGASARFHEYEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGA 60
Query: 278 LVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSA 337
L + + D + +V W ++ISGY+Q ++L +F +M +G +P++ TL VL++
Sbjct: 61 LDDARNVLDRMPERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTS 120
Query: 338 CSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMP 391
CS + +G+++ S+ K E + ++D+ ++ +++A ++ + +P
Sbjct: 121 CSGPQSIYQGKQV-HSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLP 173
>gi|357470275|ref|XP_003605422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355506477|gb|AES87619.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 839
Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust.
Identities = 236/623 (37%), Positives = 363/623 (58%), Gaps = 27/623 (4%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM-------PEKNVVSWTVMLGGFIRDSRI 53
M E+NVV+WT M+ + G EA LF +M P++ ++ + + I+ +
Sbjct: 221 MREKNVVTWTLMITRLAQYGYNDEAIDLFLEMLVSSGYVPDRFTLTGLISVCAEIQ--FL 278
Query: 54 DDARRLFDMMPEK----DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGY 109
+ L + D+ ++V Y + G V E R++FD M + NV+SWT +++GY
Sbjct: 279 SLGKELHSWVIRSGLVLDLCVGCSLVDMYAKCGLVQEARKVFDGMREHNVMSWTALVNGY 338
Query: 110 V--NNNRIDVARKLFEVMPEKNEVSWTAMLMG--YTQCGRIQ--DAWELFKAMPMKSVVA 163
V A ++F M + V+ C + D E +K ++
Sbjct: 339 VRGGGGYEREAMRMFSNMLLQGGVAPNCFTFSGVLKACASLPDFDFGEQVHGQTIKLGLS 398
Query: 164 S-----NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEV-IDLFTL 217
+ N ++ ++G ++ AR FD + EK+ + + ++ K + L DL
Sbjct: 399 AIDCVGNGLVSVYAKSGRMESARKCFDVLFEKNLVSET-VVDDTNVKDFNLNSEQDLDRE 457
Query: 218 MQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGE 277
++ G V+ + S+LS A + ++ G Q+HA +V+ F D+ V + LI+MY KCG
Sbjct: 458 VEYVGSGVSSFTYASLLSGAACIGTIGKGEQIHAMVVKIGFRTDLSVNNALISMYSKCGN 517
Query: 278 LVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSA 337
+F++ +++ W SII+G+A++G K+L++F+ M +GV P+DVT + VLSA
Sbjct: 518 KEAALQVFNDMEDCNVITWTSIINGFAKHGFASKALELFYNMLETGVKPNDVTYIAVLSA 577
Query: 338 CSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAI 397
CS+ G + E + F SM+ + + P+ EHYACMVDLLGR+G + +A++ I +MPF+ DA+
Sbjct: 578 CSHVGLIDEAWKHFTSMRDNHGIVPRMEHYACMVDLLGRSGLLSEAIEFINSMPFDADAL 637
Query: 398 IWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMR 457
+W + LG+CR H L E AAK +L+ EP + YILLSN+YA++GR+ DVA +RKNM+
Sbjct: 638 VWRTFLGSCRVHRNTKLGEHAAKMILEREPHDPATYILLSNLYATEGRWEDVAAIRKNMK 697
Query: 458 KRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVL 517
++ + K G SWIEVE +VH F D + HP+ I L+++ ++ GY P++ FVL
Sbjct: 698 QKQITKEAGSSWIEVENQVHKFHVGDTL-HPKAQQIYEKLDELALKIKNVGYVPNTDFVL 756
Query: 518 HDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGRE 577
HDV++E+K L HSEKLAVA+ L+ P PIRV KNLRVCGDCH+AIK IS V GRE
Sbjct: 757 HDVEDEQKEQYLFQHSEKLAVAFALISTPNPKPIRVFKNLRVCGDCHTAIKYISMVSGRE 816
Query: 578 IILRDANRFHHFKDGLCSCRDYW 600
I++RDANRFHH KDG CSC DYW
Sbjct: 817 IVVRDANRFHHMKDGTCSCNDYW 839
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 92/356 (25%), Positives = 172/356 (48%), Gaps = 33/356 (9%)
Query: 67 DVVAQTNMVLGYCQDGRVDEGREIFDEM--PKKNVISWTTMISGYVNNNRIDVARKLFE- 123
D + +++ Y + IF M K++V+S++++IS + NN A ++F+
Sbjct: 86 DTLLLNSLITLYSKSNDPITAFSIFQSMENSKRDVVSYSSIISCFANNRNCLKAVEMFDQ 145
Query: 124 ------VMPEKNEVSWTAMLMGYTQCGRIQDAWELF----KAMPMKSVVASNSMILGLGQ 173
V P NE +TA++ + G + LF K S V ++ +
Sbjct: 146 LLLQDGVYP--NEYCFTAVIRACLKGGFFKTGLCLFGFVLKTGYFDSHVCVGCELIDMFV 203
Query: 174 NG----EVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLF-TLMQKEGVRVNFP 228
G +++ AR VFD+MREK+ TW+ MI + GY E IDLF ++ G +
Sbjct: 204 KGCSLADLESARKVFDKMREKNVVTWTLMITRLAQYGYNDEAIDLFLEMLVSSGYVPDRF 263
Query: 229 SLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNF 288
+L ++SVCA + L G+++H+ ++R +D+ V L+ MY KCG + + + +FD
Sbjct: 264 TLTGLISVCAEIQFLSLGKELHSWVIRSGLVLDLCVGCSLVDMYAKCGLVQEARKVFDGM 323
Query: 289 ASKDIVMWNSIISGYAQYGLG--EKSLKVFHEM-FSSGVMPDDVTLVGVLSACSYTGKVK 345
+++ W ++++GY + G G +++++F M GV P+ T GVL AC+
Sbjct: 324 REHNVMSWTALVNGYVRGGGGYEREAMRMFSNMLLQGGVAPNCFTFSGVLKACASLPDFD 383
Query: 346 EGREIFESMKSKYLVEPKTEHYAC----MVDLLGRAGQVEDAMKLIEAMPFEPDAI 397
G ++ ++ C +V + ++G++E A K + + FE + +
Sbjct: 384 FGEQVHGQT-----IKLGLSAIDCVGNGLVSVYAKSGRMESARKCFDVL-FEKNLV 433
>gi|226492710|ref|NP_001145953.1| uncharacterized protein LOC100279479 [Zea mays]
gi|219885099|gb|ACL52924.1| unknown [Zea mays]
Length = 530
Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust.
Identities = 205/532 (38%), Positives = 325/532 (61%), Gaps = 12/532 (2%)
Query: 78 YCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN----NRIDVARKLFEVMPEKNEVSW 133
YC+ G V + R +FD+MP ++V+SWT +I+GY N I + + N ++
Sbjct: 2 YCKCGAVSDARHVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFTF 61
Query: 134 TAMLMGYTQCGRIQDAWELFKAMPMK-----SVVASNSMILGLGQNGEVQKARVVFDQMR 188
T++L CG E A+ +K V ++++ + ++ A +VFD++
Sbjct: 62 TSLLKATGACGGCSIG-EQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLV 120
Query: 189 EKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQ 248
K++ +W+ +I + RK + F MQ+ G + S+ S A + +L+ GR
Sbjct: 121 SKNEVSWNALIAGFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRW 180
Query: 249 VHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGL 308
VHA L++ + +V + ++ MY K G +V + +FD +D+V WN++++ AQYGL
Sbjct: 181 VHAHLIKSGQKLTAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQYGL 240
Query: 309 GEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYA 368
G++++ F E+ G+ + +T + VL+ACS+ G VKEG+ F+ MK Y V+P+ +HY
Sbjct: 241 GKEAVAHFEEIRKCGIQLNQITFLSVLTACSHGGLVKEGKHYFDMMKD-YNVQPEIDHYV 299
Query: 369 CMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPK 428
VDLLGRAG +++A+ + MP EP A +WG+LLGACR H + + AA + +L+P
Sbjct: 300 SFVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALLGACRMHKNAKMGQYAADHVFELDPD 359
Query: 429 NAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHP 488
+ GP +LL NIYAS G+++D A +RK M+ V K P CSW+++E VHMF D +HP
Sbjct: 360 DTGPPVLLYNIYASTGKWNDAARVRKMMKATGVKKEPACSWVQIENSVHMFVADD-DTHP 418
Query: 489 EHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEG 548
+ I RM E+I +++AGY P+++ VL ++E+E+ L+YHSEK+A+A+ L+ +P G
Sbjct: 419 KSGDIYRMWEEINMRIKKAGYVPNTAHVLLHINEQERETKLKYHSEKIALAFALINMPAG 478
Query: 549 VPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
IR+MKN+R+CGDCHSA K +SKV REI++RD NRFHHF +G CSC DYW
Sbjct: 479 ASIRIMKNIRICGDCHSAFKYVSKVFKREIVVRDTNRFHHFSEGSCSCGDYW 530
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 140/305 (45%), Gaps = 25/305 (8%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEK----NVVSWTVML------GGFIRD 50
MP R+VVSWT ++ GY + M EA L M N ++T +L GG
Sbjct: 18 MPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFTFTSLLKATGACGGCSIG 77
Query: 51 SRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYV 110
++ ++ ++DV + ++ Y + ++D +FD + KN +SW +I+G+
Sbjct: 78 EQMHALAVKYNW--DEDVYVGSALLDMYARCEQMDMAIMVFDRLVSKNEVSWNALIAGFA 135
Query: 111 NNNRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRI-QDAW---ELFKAMPMKSVV 162
+ F M ++++M + + G + Q W L K+ +
Sbjct: 136 RKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRWVHAHLIKSGQKLTAF 195
Query: 163 ASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEG 222
N+M+ ++G + AR VFD+M ++D TW+ M+ + G E + F ++K G
Sbjct: 196 VGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQYGLGKEAVAHFEEIRKCG 255
Query: 223 VRVNFPSLISVLSVCASLASLDHGRQVHAQL--VRCQFDVDVYVASVLITMYIKCGELVK 280
+++N + +SVL+ C+ + G+ + Q ++D YV+ + + + G L+K
Sbjct: 256 IQLNQITFLSVLTACSHGGLVKEGKHYFDMMKDYNVQPEIDHYVS--FVDLLGRAG-LLK 312
Query: 281 GKLIF 285
LIF
Sbjct: 313 EALIF 317
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 66/135 (48%), Gaps = 2/135 (1%)
Query: 271 MYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVT 330
MY KCG + + +FD S+D+V W +I+GYAQ + +++ + +M + P+ T
Sbjct: 1 MYCKCGAVSDARHVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFT 60
Query: 331 LVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAM 390
+L A G G ++ ++ KY + + ++D+ R Q++ A+ + + +
Sbjct: 61 FTSLLKATGACGGCSIGEQM-HALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRL 119
Query: 391 PFEPDAIIWGSLLGA 405
+ + W +L+
Sbjct: 120 -VSKNEVSWNALIAG 133
Score = 43.9 bits (102), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 65/141 (46%), Gaps = 14/141 (9%)
Query: 41 TVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPK---- 96
MLG + + + DAR++FD M ++D+V M+ Q G E F+E+ K
Sbjct: 198 NTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQYGLGKEAVAHFEEIRKCGIQ 257
Query: 97 KNVISWTTMISGYVNNNRIDVARKLFEVMPEKN-------EVSWTAMLMGYTQCGRIQDA 149
N I++ ++++ + + + F++M + N VS+ +L + G +++A
Sbjct: 258 LNQITFLSVLTACSHGGLVKEGKHYFDMMKDYNVQPEIDHYVSFVDLL---GRAGLLKEA 314
Query: 150 WELFKAMPMKSVVASNSMILG 170
MPM+ A +LG
Sbjct: 315 LIFVFKMPMEPTAAVWGALLG 335
>gi|86438643|emb|CAJ26357.1| Selenium binding protein [Brachypodium sylvaticum]
Length = 624
Score = 430 bits (1106), Expect = e-117, Method: Compositional matrix adjust.
Identities = 214/567 (37%), Positives = 341/567 (60%), Gaps = 20/567 (3%)
Query: 49 RDSRIDDARRLFDMMP----EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTT 104
+ +DDAR++ + E D +++ YC+ G V E ++FD+M KK+++SWT+
Sbjct: 63 QSKNLDDARKIHGHLASSRFEGDAFLDNSLIHLYCKCGSVVEAHKVFDKMRKKDMVSWTS 122
Query: 105 MISGYVNNNRIDVARKLFEVMP-------EKNEVSWTAMLMG---YTQCGRIQDAWEL-F 153
+I+GY N D+ + ++P + N ++ ++L Y G L
Sbjct: 123 LIAGYAQN---DMPAEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYADSGIGGQIHALAV 179
Query: 154 KAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVID 213
K + V ++++ + G++ A VFD++ K+ +W+ +I + RKG +
Sbjct: 180 KCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGDGETALM 239
Query: 214 LFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYI 273
+F MQ+ G + S+ S A + +L+ G+ VHA +V+ + + +V + ++ MY
Sbjct: 240 VFAEMQRNGFEATHFTYSSIFSGLAGIGALEQGKWVHAHMVKSRQKLTAFVGNTMLDMYA 299
Query: 274 KCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVG 333
K G ++ + +F+ +KD+V WNS+++ +AQYGLG++++ F EM SG+ + +T +
Sbjct: 300 KSGSMIDARKVFERVLNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQITFLC 359
Query: 334 VLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFE 393
+L+ACS+ G VKEG+ F+ +K +Y +EP+ EHY +VDLLGRAG + A+ I MP E
Sbjct: 360 ILTACSHGGLVKEGKHYFDMIK-EYNLEPEIEHYVTVVDLLGRAGLLNYALVFIFKMPME 418
Query: 394 PDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELR 453
P A +WG+LL ACR H + + AA + QL+P ++GP +LL NIYAS G + A +R
Sbjct: 419 PTAAVWGALLAACRMHKNAKVGQFAADHVFQLDPDDSGPPVLLYNIYASTGHWDAAARVR 478
Query: 454 KNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDS 513
K M+ V K P CSW+E+ VHMF D +HP I +M ++I +R+ GY PD
Sbjct: 479 KMMKATGVKKEPACSWVEIGNSVHMFVAND-DTHPRAEEIYKMWDEISMKIRKEGYVPDM 537
Query: 514 SFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKV 573
+VL VDE+E+ +L+YHSEK+A+A+ L+++P G IR+MKN+R+CGDCHSA K ISKV
Sbjct: 538 DYVLLHVDEQEREANLQYHSEKIALAFALIQMPAGATIRIMKNIRICGDCHSAFKYISKV 597
Query: 574 MGREIILRDANRFHHFKDGLCSCRDYW 600
REI++RD NRFHHF +G CSC DYW
Sbjct: 598 FEREIVVRDTNRFHHFSNGSCSCGDYW 624
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 121/264 (45%), Gaps = 16/264 (6%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM------PEKNVVSWTVMLGGFIRDSRID 54
M ++++VSWT+++ GY + M EA L M P + + G DS I
Sbjct: 112 MRKKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYADSGIG 171
Query: 55 DARRLFDMMPE--KDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+ + +DV + ++ Y + G++D +FD++ KN +SW +ISG+
Sbjct: 172 GQIHALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARK 231
Query: 113 NRIDVARKLFEVMP----EKNEVSWTAMLMGYTQCGRI-QDAW---ELFKAMPMKSVVAS 164
+ A +F M E +++++ G G + Q W + K+ +
Sbjct: 232 GDGETALMVFAEMQRNGFEATHFTYSSIFSGLAGIGALEQGKWVHAHMVKSRQKLTAFVG 291
Query: 165 NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVR 224
N+M+ ++G + AR VF+++ KD TW+ M+ + + G E + F M+K G+
Sbjct: 292 NTMLDMYAKSGSMIDARKVFERVLNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGIY 351
Query: 225 VNFPSLISVLSVCASLASLDHGRQ 248
+N + + +L+ C+ + G+
Sbjct: 352 LNQITFLCILTACSHGGLVKEGKH 375
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 84/172 (48%), Gaps = 2/172 (1%)
Query: 232 SVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASK 291
+ ++ CA +LD R++H L +F+ D ++ + LI +Y KCG +V+ +FD K
Sbjct: 56 AFITACAQSKNLDDARKIHGHLASSRFEGDAFLDNSLIHLYCKCGSVVEAHKVFDKMRKK 115
Query: 292 DIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIF 351
D+V W S+I+GYAQ + +++ + M P+ T +L A G +I
Sbjct: 116 DMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYADSGIGGQI- 174
Query: 352 ESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
++ K + ++D+ R G+++ A + + + + + W +L+
Sbjct: 175 HALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLD-SKNGVSWNALI 225
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 84/192 (43%), Gaps = 12/192 (6%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVV 69
+A++ Y G + A +F ++ KN VSW ++ GF R + A +F M
Sbjct: 191 SALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGDGETALMVFAEMQRNGFE 250
Query: 70 AQ----TNMVLGYCQDGRVDEGREIFDEMPKK----NVISWTTMISGYVNNNRIDVARKL 121
A +++ G G +++G+ + M K TM+ Y + + ARK+
Sbjct: 251 ATHFTYSSIFSGLAGIGALEQGKWVHAHMVKSRQKLTAFVGNTMLDMYAKSGSMIDARKV 310
Query: 122 FEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMIL----GLGQNGEV 177
FE + K+ V+W +ML + Q G ++A F+ M + + L G V
Sbjct: 311 FERVLNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQITFLCILTACSHGGLV 370
Query: 178 QKARVVFDQMRE 189
++ + FD ++E
Sbjct: 371 KEGKHYFDMIKE 382
>gi|188509949|gb|ACD56635.1| putative pentatricopeptide repeat protein [Gossypium raimondii]
Length = 667
Score = 430 bits (1106), Expect = e-117, Method: Compositional matrix adjust.
Identities = 232/657 (35%), Positives = 366/657 (55%), Gaps = 68/657 (10%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
M ++NV W MV Y + G E+ LF M EK I R + A LF
Sbjct: 22 MEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKG-----------IEGKRSESASELF 70
Query: 61 DMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEM-------------------PKKNVIS 101
D + ++DV++ +M+ GY +G + G I+ +M K +S
Sbjct: 71 DKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCAKSGTLS 130
Query: 102 W--------------------TTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYT 141
T++ Y +D A ++FE M E+N VSWT+M+ GYT
Sbjct: 131 LGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYT 190
Query: 142 QCGRIQDAWELFKAMPMKSV----VASNSMILGLGQNGEVQKARVVFDQMREKDDAT--- 194
+ G A L + M + V VA S++ ++G + + V D ++ + A+
Sbjct: 191 RDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMASNLF 250
Query: 195 -WSGMIKVYERKGYELEVIDLFTLMQKEGV----------RVNFPSLISVLSVCASLASL 243
+ ++ +Y + G +F+ M + + + + ++ +L CASL++L
Sbjct: 251 VCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVGELKPDSRTMACILPACASLSAL 310
Query: 244 DHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGY 303
+ G+++H ++R + D +VA+ L+ +Y+KCG L +L+FD SKD+V W +I+GY
Sbjct: 311 ERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGY 370
Query: 304 AQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPK 363
+G G +++ F+EM +G+ PD+V+ + +L ACS++G +++G F MK+ + +EPK
Sbjct: 371 GMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPK 430
Query: 364 TEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLL 423
EHYACMVDLL R G + A K IE +P PDA IWG+LL CR + ++LAE A+++
Sbjct: 431 LEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGALLCGCRIYHDIELAEKVAERVF 490
Query: 424 QLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRD 483
+LEP+N G Y+LL+NIYA ++ +V +R+ + K+ + K PGCSWIE++ +V++F +
Sbjct: 491 ELEPENTGYYVLLANIYAEAEKWEEVKRMREKIGKKGLRKNPGCSWIEIKGRVNLFVSGN 550
Query: 484 CVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLV 543
SHP I +L+K+ ++E GY P + + L + DE +K +L HSEKLA+A+GL+
Sbjct: 551 NSSHPHSKKIESLLKKMRRKMKEEGYFPKTKYALINADEMQKEMALCGHSEKLAMAFGLL 610
Query: 544 KLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
LP IRV KNLRVCGDCH K +SK REI+LRD+NRFHHFKDG CSCR +W
Sbjct: 611 TLPPRKTIRVTKNLRVCGDCHEMAKFMSKETRREIVLRDSNRFHHFKDGYCSCRGFW 667
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 100/388 (25%), Positives = 183/388 (47%), Gaps = 57/388 (14%)
Query: 53 IDDARRLFDMMPEKDVVAQTNMVLGYCQDG--------------------RVDEGREIFD 92
+ + RR+FD M +K+V MV Y + G R + E+FD
Sbjct: 12 LKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRSESASELFD 71
Query: 93 EMPKKNVISWTTMISGYVNNNRIDVARKLFEVM----PEKNEVSWTAMLMGYTQCGRIQD 148
++ ++VISW +MISGYV+N + +++ M + + + ++L+G + G +
Sbjct: 72 KLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCAKSGTLSL 131
Query: 149 AWELFKAMPMKS-----VVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYE 203
+ ++ +KS + SN+++ + G++ A VF++M E++ +W+ MI Y
Sbjct: 132 G-KAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYT 190
Query: 204 RKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVY 263
R G+ I L M+KEGV+++ ++ S+L CA SLD+G+ VH + +++
Sbjct: 191 RDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMASNLF 250
Query: 264 VASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSG 323
V + L+ MY KCG + +F KDI+ WN+++ GE
Sbjct: 251 VCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMV--------GE------------- 289
Query: 324 VMPDDVTLVGVLSACSYTGKVKEGREIFES-MKSKYLVEPKTEHYA-CMVDLLGRAGQVE 381
+ PD T+ +L AC+ ++ G+EI +++ Y H A +VDL + G +
Sbjct: 290 LKPDSRTMACILPACASLSALERGKEIHGYILRNGY---SSDRHVANALVDLYVKCGVLG 346
Query: 382 DAMKLIEAMPFEPDAIIWGSLLGACRTH 409
A L + +P D + W ++ H
Sbjct: 347 LARLLFDMIP-SKDLVSWTVMIAGYGMH 373
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 79/189 (41%), Gaps = 53/189 (28%)
Query: 268 LITMYIKCGELVKGKLIFD----------NF----------------------------- 288
L++ Y CG+L +G+ +FD NF
Sbjct: 2 LVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGK 61
Query: 289 ------------ASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLS 336
+D++ WNS+ISGY GL E+ L ++ +M G+ D T++ VL
Sbjct: 62 RSESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLV 121
Query: 337 ACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDA 396
C+ +G + G+ + S+ K E + ++D+ + G ++ A+++ E M E +
Sbjct: 122 GCAKSGTLSLGKAV-HSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMG-ERNV 179
Query: 397 IIWGSLLGA 405
+ W S++
Sbjct: 180 VSWTSMIAG 188
>gi|125573515|gb|EAZ15030.1| hypothetical protein OsJ_04972 [Oryza sativa Japonica Group]
Length = 813
Score = 430 bits (1106), Expect = e-117, Method: Compositional matrix adjust.
Identities = 233/652 (35%), Positives = 359/652 (55%), Gaps = 63/652 (9%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRID--------------- 54
TA++ YV+ + +A +F MP +++V+W ML G+
Sbjct: 164 TALLDMYVKCACLPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHR 223
Query: 55 ---DARRLFDMMP---EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISG 108
+A L ++P ++ +AQ V YC + R ++ V+ T ++
Sbjct: 224 LRPNASTLVALLPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKL-TDGVLLGTALLDM 282
Query: 109 YVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSV------- 161
Y + AR++F+ MP +NEV+W+A++ G+ C R+ A+ LFKAM + +
Sbjct: 283 YAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTS 342
Query: 162 ---------------------------------VASNSMILGLGQNGEVQKARVVFDQMR 188
A NS++ + G + +A +FD+M
Sbjct: 343 IASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMA 402
Query: 189 EKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQ 248
KD ++S ++ Y + G E +F MQ V + +++S++ C+ LA+L HGR
Sbjct: 403 VKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRC 462
Query: 249 VHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGL 308
H ++ + + + LI MY KCG + + +F+ S+DIV WN++I+GY +GL
Sbjct: 463 SHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGL 522
Query: 309 GEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYA 368
G+++ +F EM + G PD VT + +LSACS++G V EG+ F M Y + P+ EHY
Sbjct: 523 GKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYI 582
Query: 369 CMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPK 428
CMVDLL R G +++A + I++MP D +W +LLGACR + +DL + ++ + +L P+
Sbjct: 583 CMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPE 642
Query: 429 NAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHP 488
G ++LLSNIY++ GRF + AE+R + + K PGCSWIE+ +H F G D SHP
Sbjct: 643 GTGNFVLLSNIYSAAGRFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGD-QSHP 701
Query: 489 EHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEG 548
+ P I R L+ I +++ GY PD+SFVL D++EEEK +L HSEKLA+AYG++ L E
Sbjct: 702 QSPEIYRELDNILVGIKKLGYQPDTSFVLQDLEEEEKEKALICHSEKLAIAYGILSLSED 761
Query: 549 VPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
I V KNLRVCGDCH+ IK IS V R II+RDANRFHHFK+G CSC D+W
Sbjct: 762 KTIFVTKNLRVCGDCHTVIKHISLVKRRAIIVRDANRFHHFKNGQCSCGDFW 813
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 100/442 (22%), Positives = 194/442 (43%), Gaps = 37/442 (8%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAG--TLFWQM------PEKNVVSWTVMLGGFIRDSR 52
+P +V ++ ++R Y A L+ +M P + + + D
Sbjct: 83 IPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFPFALKACSALADHH 142
Query: 53 IDDA--RRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYV 110
A R + D+ T ++ Y + + + IF MP +++++W M++GY
Sbjct: 143 CGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARDLVAWNAMLAGYA 202
Query: 111 NN--------NRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELF--------- 153
++ + + + ++ + P N + A+L Q G + +
Sbjct: 203 HHGMYHHAVAHLLSMQMQMHRLRP--NASTLVALLPLLAQQGALAQGTSVHAYCIRACLH 260
Query: 154 -----KAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYE 208
K+ V+ +++ + G + AR VFD M +++ TWS +I +
Sbjct: 261 PNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRM 320
Query: 209 LEVIDLFTLMQKEGVRVNFP-SLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASV 267
+ LF M +G+ P S+ S L CASL L G Q+HA L + D+ +
Sbjct: 321 TQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNS 380
Query: 268 LITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPD 327
L++MY K G + + +FD A KD V +++++SGY Q G E++ VF +M + V PD
Sbjct: 381 LLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPD 440
Query: 328 DVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLI 387
T+V ++ ACS+ ++ GR S+ + L +T ++D+ + G+++ + ++
Sbjct: 441 AATMVSLIPACSHLAALQHGRCSHGSVIIRGLAS-ETSICNALIDMYAKCGRIDLSRQVF 499
Query: 388 EAMPFEPDAIIWGSLLGACRTH 409
MP D + W +++ H
Sbjct: 500 NMMP-SRDIVSWNTMIAGYGIH 520
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 114/244 (46%), Gaps = 14/244 (5%)
Query: 174 NGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEV--IDLFTLMQKEGVRVNFPSLI 231
+G + +A +FDQ+ D T++ +I+ Y + L+ M + V N +
Sbjct: 70 SGHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFP 129
Query: 232 SVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASK 291
L C++LA GR +H + D++V++ L+ MY+KC L IF ++
Sbjct: 130 FALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPAR 189
Query: 292 DIVMWNSIISGYAQYGLGEKSLK--VFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGRE 349
D+V WN++++GYA +G+ ++ + +M + P+ TLV +L + G + +G
Sbjct: 190 DLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTS 249
Query: 350 IFE---------SMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWG 400
+ + SK + ++D+ + G + A ++ +AMP + + W
Sbjct: 250 VHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPAR-NEVTWS 308
Query: 401 SLLG 404
+L+G
Sbjct: 309 ALIG 312
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 124/256 (48%), Gaps = 19/256 (7%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV--VSWTVMLGGFIRDSRIDDAR- 57
MP RN V+W+A++ G+V +T+A LF M + + +S T + + +D R
Sbjct: 299 MPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRM 358
Query: 58 --RLFDMMPEK----DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVN 111
+L ++ + D+ A +++ Y + G +D+ +FDEM K+ +S++ ++SGYV
Sbjct: 359 GEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQ 418
Query: 112 NNRIDVARKLFEVMP----EKNEVSWTAML-----MGYTQCGRIQDAWELFKAMPMKSVV 162
N R + A +F+ M E + + +++ + Q GR + + + ++ +
Sbjct: 419 NGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSI 478
Query: 163 ASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEG 222
N++I + G + +R VF+ M +D +W+ MI Y G E LF M G
Sbjct: 479 C-NALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLG 537
Query: 223 VRVNFPSLISVLSVCA 238
+ + I +LS C+
Sbjct: 538 FPPDGVTFICLLSACS 553
>gi|296081733|emb|CBI20738.3| unnamed protein product [Vitis vinifera]
Length = 865
Score = 430 bits (1106), Expect = e-117, Method: Compositional matrix adjust.
Identities = 237/624 (37%), Positives = 366/624 (58%), Gaps = 26/624 (4%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV----VSWTVMLGGFIRDSRIDD- 55
M ER+VV W M++GYV+ G+ EA LF + + S ++L G + + DD
Sbjct: 244 MRERDVVLWNMMLKGYVQLGLEKEAFQLFSEFHRSGLRPDEFSVQLILNGCLW-AGTDDL 302
Query: 56 --ARRLFDMMP----EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGY 109
+++ + + DV ++V Y + G RE+F++M ++ISW +MIS
Sbjct: 303 ELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSC 362
Query: 110 VNNNRIDVARKLF------EVMPEKNEVSWTAMLMGYTQCG--RIQDAWELFKAMPMKSV 161
++ + + LF + P+ ++ + CG + D + A +K+
Sbjct: 363 AQSSLEEESVNLFIDLLHEGLKPDHFTLASITLATAAKACGCLVLLDQGKQIHAHAIKAG 422
Query: 162 VAS----NSMILGLG-QNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFT 216
S NS IL + + G++ A +VF+ + DD W+ MI G E + + ++
Sbjct: 423 FDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYH 482
Query: 217 LMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCG 276
M++ V + + +++ + + +L+ GRQ+HA +++ D +V + L+ MY KCG
Sbjct: 483 RMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCG 542
Query: 277 ELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLS 336
+ +F ++I +WN+++ G AQ+G E+++ +F M S G+ PD V+ +G+LS
Sbjct: 543 NIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILS 602
Query: 337 ACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDA 396
ACS+ G E E SM + Y +EP+ EHY+C+VD LGRAG V++A K+IE MPF+ A
Sbjct: 603 ACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASA 662
Query: 397 IIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNM 456
I +LLGACR ++ + A +L LEP ++ Y+LLSNIYA+ R+ DV + RK M
Sbjct: 663 SINRALLGACRIQGDVETGKRVAARLFALEPFDSAAYVLLSNIYAAANRWDDVTDARKMM 722
Query: 457 RKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFV 516
+++NV K PG SWI+V+ +H+F D SHP+ +I +E++ +RE GY PD+ FV
Sbjct: 723 KRKNVKKDPGFSWIDVKNMLHLFVVDD-RSHPQADIIYDKVEEMMKTIREDGYVPDTEFV 781
Query: 517 LHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGR 576
L DV++EEK SL YHSEKLA+AYGL+ P IRV+KNLRVCGDCH+AIK ISKV R
Sbjct: 782 LLDVEDEEKERSLYYHSEKLAIAYGLISTPASTTIRVIKNLRVCGDCHNAIKYISKVFER 841
Query: 577 EIILRDANRFHHFKDGLCSCRDYW 600
EI+LRDANRFHHF+DG+CSC DYW
Sbjct: 842 EIVLRDANRFHHFRDGVCSCGDYW 865
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 121/455 (26%), Positives = 209/455 (45%), Gaps = 65/455 (14%)
Query: 16 YVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFI-----RDSRIDDARRLFDMMPEKDVVA 70
Y + G ++ A +F PE+++V+W +LG + D + LF ++ + +
Sbjct: 122 YSKCGSLSSARQVFDTTPERDLVTWNAILGAYAASVDSNDGNAQEGLHLFRLL-RASLGS 180
Query: 71 QTNM----VLGYCQDGRVDEGREIFDEMPKKNVISWTTMISG-----YVNNNRIDVARKL 121
T M VL C + E K + W +SG Y R+ AR L
Sbjct: 181 TTRMTLAPVLKLCLNSGCLWAAEGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLL 240
Query: 122 FEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFK--------------------------- 154
F+ M E++ V W ML GY Q G ++A++LF
Sbjct: 241 FDWMRERDVVLWNMMLKGYVQLGLEKEAFQLFSEFHRSGLRPDEFSVQLILNGCLWAGTD 300
Query: 155 ---------AMPMKS-----VVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIK 200
+ +KS V +NS++ + G AR VF+ M+ D +W+ MI
Sbjct: 301 DLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMIS 360
Query: 201 VYERKGYELEVIDLFTLMQKEGVRVNFPSLISVL-----SVCASLASLDHGRQVHAQLVR 255
+ E E ++LF + EG++ + +L S+ C L LD G+Q+HA ++
Sbjct: 361 SCAQSSLEEESVNLFIDLLHEGLKPDHFTLASITLATAAKACGCLVLLDQGKQIHAHAIK 420
Query: 256 CQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKV 315
FD D++V S ++ MYIKCG++V ++F+ ++ D V W S+ISG G +++L++
Sbjct: 421 AGFDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRI 480
Query: 316 FHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFES-MKSKYLVEPKTEHYACMVDLL 374
+H M S VMPD+ T ++ A S +++GR++ + +K + +P +VD+
Sbjct: 481 YHRMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVG--TSLVDMY 538
Query: 375 GRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTH 409
+ G +EDA +L + M A +W ++L H
Sbjct: 539 AKCGNIEDAYRLFKKMNVRNIA-LWNAMLVGLAQH 572
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 95/393 (24%), Positives = 174/393 (44%), Gaps = 61/393 (15%)
Query: 66 KDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVM 125
+ ++ N++LG C R+ D N+++ Y + AR++F+
Sbjct: 85 RTAISTHNLLLGKCTHARIVVSGSAGDHFLSNNLLTM------YSKCGSLSSARQVFDTT 138
Query: 126 PEKNEVSWTAMLMGYTQC-----GRIQDAWELFKAMPMK--------------------- 159
PE++ V+W A+L Y G Q+ LF+ +
Sbjct: 139 PERDLVTWNAILGAYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGC 198
Query: 160 ------------------SVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKV 201
V S +++ + G ++ AR++FD MRE+D W+ M+K
Sbjct: 199 LWAAEGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKG 258
Query: 202 YERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVC--ASLASLDHGRQVHAQLVRCQFD 259
Y + G E E LF+ + G+R + S+ +L+ C A L+ G+QVH V+ D
Sbjct: 259 YVQLGLEKEAFQLFSEFHRSGLRPDEFSVQLILNGCLWAGTDDLELGKQVHGIAVKSGLD 318
Query: 260 VDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEM 319
DV VA+ L+ MY K G + +F++ D++ WNS+IS AQ L E+S+ +F ++
Sbjct: 319 SDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDL 378
Query: 320 FSSGVMPDDVTLVGVL-----SACSYTGKVKEGREIF-ESMKSKYLVEPKTEHYACMVDL 373
G+ PD TL + AC + +G++I ++K+ + + + ++D+
Sbjct: 379 LHEGLKPDHFTLASITLATAAKACGCLVLLDQGKQIHAHAIKAGF--DSDLHVNSGILDM 436
Query: 374 LGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGAC 406
+ G + +A + + PD + W S++ C
Sbjct: 437 YIKCGDMVNAGIVFNYIS-APDDVAWTSMISGC 468
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 83/176 (47%), Gaps = 7/176 (3%)
Query: 233 VLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKD 292
+L S +L G+ HA++V D ++++ L+TMY KCG L + +FD +D
Sbjct: 83 LLRTAISTHNLLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERD 142
Query: 293 IVMWNSIISGYAQY-----GLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEG 347
+V WN+I+ YA G ++ L +F + +S +TL VL C +G +
Sbjct: 143 LVTWNAILGAYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAA 202
Query: 348 REIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
+ K +E +V++ + G++ DA L + M E D ++W +L
Sbjct: 203 EGV-HGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMR-ERDVVLWNMML 256
>gi|147841045|emb|CAN68552.1| hypothetical protein VITISV_014227 [Vitis vinifera]
Length = 1309
Score = 430 bits (1106), Expect = e-117, Method: Compositional matrix adjust.
Identities = 220/544 (40%), Positives = 331/544 (60%), Gaps = 11/544 (2%)
Query: 66 KDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVN----NNRIDVARKL 121
++++ +V Y +D+ +FD M ++ +SW+ M+ G+ N R+L
Sbjct: 768 QNLIVANKLVXFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYMNCFGTFREL 827
Query: 122 FEVMPEKNEVSWTAML-----MGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGE 176
+ + ++ + Q GR+ + + V + +++ G+ E
Sbjct: 828 IRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCA-ALVDMYGKCRE 886
Query: 177 VQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSV 236
++ AR +FD+M E+D TW+ MI Y G E + LF M++EGV + ++++V+
Sbjct: 887 IEDARFLFDKMXERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFA 946
Query: 237 CASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMW 296
CA L ++ R + + R +F +DV + + +I M+ KCG + + IFD K+++ W
Sbjct: 947 CAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISW 1006
Query: 297 NSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKS 356
+++I+ Y +G G K+L +F M SG++P+ +TLV +L ACS+ G V+EG F M
Sbjct: 1007 SAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSXMWE 1066
Query: 357 KYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAE 416
Y V +HY C+VDLLGRAG++++A+KLI +M E D +WG+ LGACRTH + LAE
Sbjct: 1067 DYSVRXDVKHYTCVVDLLGRAGRLDEALKLIXSMTXEKDEGLWGAFLGACRTHKDVXLAE 1126
Query: 417 VAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKV 476
AA LL+L+P+N G YILLSNIYA+ GR+ DVA++R M +R + K PG +WIEV+ K
Sbjct: 1127 KAATSLLELQPQNPGHYILLSNIYANAGRWEDVAKIRDLMSQRRLKKIPGWTWIEVDNKS 1186
Query: 477 HMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKL 536
H F+ D +HP I ML+ +G L GY PD++FVLHDVDEE K+ L HSEKL
Sbjct: 1187 HQFSVGD-TTHPRSKEIYEMLKSLGNKLELVGYVPDTNFVLHDVDEELKIGILYTHSEKL 1245
Query: 537 AVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSC 596
A+A+GL+ PE PIR++KNLRVCGDCH+ KL+S + GR II+RDANRFHHFK+G CSC
Sbjct: 1246 AIAFGLIATPEHTPIRIIKNLRVCGDCHTFCKLVSAITGRVIIVRDANRFHHFKEGACSC 1305
Query: 597 RDYW 600
DYW
Sbjct: 1306 GDYW 1309
Score = 355 bits (912), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 193/501 (38%), Positives = 289/501 (57%), Gaps = 40/501 (7%)
Query: 97 KNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQ-------------- 142
+N++ +I Y +D A LF+ M ++ VSW+ M+ G+ +
Sbjct: 92 ENIVVANKLIYFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYINCFGTFREL 151
Query: 143 --CGRIQDAWEL---------FKAMPMKSVVASNSMILGLGQNG--------------EV 177
CG D + L K + M ++ GL + E+
Sbjct: 152 IRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYVKCREI 211
Query: 178 QKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVC 237
+ AR +FD+M+E+D TW+ MI Y G E + LF M++EGV + ++++V+ C
Sbjct: 212 EDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFAC 271
Query: 238 ASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWN 297
A L ++ R + + R +F +DV + + +I MY KCG + + IFD K+++ W+
Sbjct: 272 AKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWS 331
Query: 298 SIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSK 357
++I+ Y +G G K+L +F M SSG++PD +TL +L ACS+ G V+EG F SM
Sbjct: 332 AMIAAYGYHGQGRKALDLFPMMLSSGMLPDKITLASLLYACSHAGLVEEGLRFFSSMWED 391
Query: 358 YLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEV 417
Y V +HY C+VDLLGRAG++++A+KLI++M E D +WG+ LGACRTH + LAE
Sbjct: 392 YSVRTDVKHYTCVVDLLGRAGRLDEALKLIKSMTIEKDEGLWGAFLGACRTHKDVVLAEK 451
Query: 418 AAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVH 477
AA LL+L+ +N G Y+LLSNIYA+ GR+ DVA++R M +R + K PG +WIEV+ K H
Sbjct: 452 AATSLLELQSQNPGHYVLLSNIYANAGRWEDVAKIRDLMSQRRLKKTPGWTWIEVDNKSH 511
Query: 478 MFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLA 537
F+ D +HP I ML+ + L GY PD++FVLHDVDEE K+ L HSEKLA
Sbjct: 512 QFSVGD-TTHPRSKEIYEMLKSLSNKLELVGYVPDTNFVLHDVDEELKIGILYTHSEKLA 570
Query: 538 VAYGLVKLPEGVPIRVMKNLR 558
+A+GL+ PE PIR++KNLR
Sbjct: 571 IAFGLIATPEHTPIRIIKNLR 591
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 129/252 (51%), Gaps = 2/252 (0%)
Query: 158 MKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTL 217
++++V +N +I + A +FD M +D +WS M+ + + G + F
Sbjct: 91 LENIVVANKLIYFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYINCFGTFRE 150
Query: 218 MQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGE 277
+ + G R + +L V+ C L +L GR +H + + D+D +V + L+ MY+KC E
Sbjct: 151 LIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYVKCRE 210
Query: 278 LVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSA 337
+ + +FD +D+V W +I GYA+ G +SL +F +M GV+PD V +V V+ A
Sbjct: 211 IEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFA 270
Query: 338 CSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAI 397
C+ G + + R I + ++ K + M+D+ + G VE A ++ + M E + I
Sbjct: 271 CAKLGAMHKARIIDDYIQRKKF-QLDVILGTAMIDMYAKCGCVESAREIFDRME-EKNVI 328
Query: 398 IWGSLLGACRTH 409
W +++ A H
Sbjct: 329 SWSAMIAAYGYH 340
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 128/252 (50%), Gaps = 2/252 (0%)
Query: 158 MKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTL 217
+++++ +N ++ + A +FD M +D +WS M+ + + G + F
Sbjct: 767 LQNLIVANKLVXFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYMNCFGTFRE 826
Query: 218 MQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGE 277
+ + G R + +L V+ C L +L GR +H + + D+D +V + L+ MY KC E
Sbjct: 827 LIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCRE 886
Query: 278 LVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSA 337
+ + +FD +D+V W +I GYA+ G +SL +F +M GV+PD V +V V+ A
Sbjct: 887 IEDARFLFDKMXERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFA 946
Query: 338 CSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAI 397
C+ G + + R I + ++ K + M+D+ + G VE A ++ + M E + I
Sbjct: 947 CAKLGAMHKARTIDDYIQRKKF-QLDVILGTAMIDMHAKCGCVESAREIFDRME-EKNVI 1004
Query: 398 IWGSLLGACRTH 409
W +++ A H
Sbjct: 1005 SWSAMIAAYGYH 1016
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 147/326 (45%), Gaps = 30/326 (9%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRL- 59
M R+ VSW+ MV G+ + G F ++ L IR R D + L
Sbjct: 796 MCVRDSVSWSVMVGGFAKVGDYMNCFGTFRELIRCGARPDNYTLPFVIRACR--DLKNLQ 853
Query: 60 -----------FDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISG 108
F + + V A + G C++ +++ R +FD+M ++++++WT MI G
Sbjct: 854 MGRLIHHIVYKFGLDLDHFVCAALVDMYGKCRE--IEDARFLFDKMXERDLVTWTVMIGG 911
Query: 109 YVNNNRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAMPMK----S 160
Y + + LF+ M E+ ++V+ ++ + G + A + + K
Sbjct: 912 YAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLD 971
Query: 161 VVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQK 220
V+ +MI + G V+ AR +FD+M EK+ +WS MI Y G + +DLF +M +
Sbjct: 972 VILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLR 1031
Query: 221 EGVRVNFPSLISVLSVCASLASLDHGRQVHAQL---VRCQFDVDVYVASVLITMYIKCGE 277
G+ N +L+S+L C+ ++ G + + + + DV Y + ++ + + G
Sbjct: 1032 SGILPNKITLVSLLYACSHAGLVEEGLRFFSXMWEDYSVRXDVKHY--TCVVDLLGRAGR 1089
Query: 278 LVKG-KLIFDNFASKDIVMWNSIISG 302
L + KLI KD +W + +
Sbjct: 1090 LDEALKLIXSMTXEKDEGLWGAFLGA 1115
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 109/221 (49%), Gaps = 26/221 (11%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVM----------LGGFIRD 50
M ER++V+WT M+ GY E G E+ LF +M E+ VV V LG +
Sbjct: 221 MQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKA 280
Query: 51 SRIDD--ARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISG 108
IDD R+ F + DV+ T M+ Y + G V+ REIFD M +KNVISW+ MI+
Sbjct: 281 RIIDDYIQRKKFQL----DVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAA 336
Query: 109 YVNNNRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAM----PMKS 160
Y + + A LF +M ++++ ++L + G +++ F +M +++
Sbjct: 337 YGYHGQGRKALDLFPMMLSSGMLPDKITLASLLYACSHAGLVEEGLRFFSSMWEDYSVRT 396
Query: 161 VVASNSMILG-LGQNGEVQKARVVFDQMR-EKDDATWSGMI 199
V + ++ LG+ G + +A + M EKD+ W +
Sbjct: 397 DVKHYTCVVDLLGRAGRLDEALKLIKSMTIEKDEGLWGAFL 437
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 86/350 (24%), Positives = 148/350 (42%), Gaps = 55/350 (15%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMP 64
N+V ++ Y + +A LF M ++ VSW+VM+GGF +++ D F
Sbjct: 93 NIVVANKLIYFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGF---AKVGDYINCFGTFR 149
Query: 65 E--KDVVAQTNMVLGY----CQDGR-VDEGREIFDEMPKKNV----ISWTTMISGYVNNN 113
E + N L + C+D + + GR I + K + ++ YV
Sbjct: 150 ELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYVKCR 209
Query: 114 RIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAM------PMK-------- 159
I+ AR LF+ M E++ V+WT M+ GY +CG+ ++ LF+ M P K
Sbjct: 210 EIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVF 269
Query: 160 -------------------------SVVASNSMILGLGQNGEVQKARVVFDQMREKDDAT 194
V+ +MI + G V+ AR +FD+M EK+ +
Sbjct: 270 ACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVIS 329
Query: 195 WSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLV 254
WS MI Y G + +DLF +M G+ + +L S+L C+ ++ G + + +
Sbjct: 330 WSAMIAAYGYHGQGRKALDLFPMMLSSGMLPDKITLASLLYACSHAGLVEEGLRFFSSMW 389
Query: 255 R-CQFDVDVYVASVLITMYIKCGELVKG-KLIFDNFASKDIVMWNSIISG 302
DV + ++ + + G L + KLI KD +W + +
Sbjct: 390 EDYSVRTDVKHYTCVVDLLGRAGRLDEALKLIKSMTIEKDEGLWGAFLGA 439
>gi|110289149|gb|ABB47711.2| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 697
Score = 430 bits (1106), Expect = e-117, Method: Compositional matrix adjust.
Identities = 216/566 (38%), Positives = 335/566 (59%), Gaps = 20/566 (3%)
Query: 49 RDSRIDDARRLFDMMPEK----DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTT 104
R +DDAR + + V +++ YC+ G V + R +FD MP +++ SWT+
Sbjct: 76 RYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMPARDMCSWTS 135
Query: 105 MISGYVNNNRIDVARKLFEVMP----EKNEVSWTAML--MGYTQCGRIQDAWELFKAMPM 158
+I+GY N+ D A L M + N ++ ++L G + I E A+ +
Sbjct: 136 LIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIG---EQIHALTV 192
Query: 159 K-----SVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVID 213
K V ++++ + G + A VFDQ+ K+ +W+ +I + RKG +
Sbjct: 193 KYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGETTLL 252
Query: 214 LFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYI 273
+F MQ+ G + SV S A + +L+ G+ VHA +++ + +V + ++ MY
Sbjct: 253 MFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTILDMYA 312
Query: 274 KCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVG 333
K G ++ + +FD KD+V WNS+++ +AQYGLG +++ F EM GV + +T +
Sbjct: 313 KSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQITFLS 372
Query: 334 VLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFE 393
+L+ACS+ G VKEG++ F+ MK +Y +EP+ +HY +VDLLGRAG + DA+ I MP +
Sbjct: 373 ILTACSHGGLVKEGKQYFDMMK-EYNLEPEIDHYVTVVDLLGRAGLLNDALVFIFKMPMK 431
Query: 394 PDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELR 453
P A +WG+LLG+CR H + + AA + +L+P + GP +LL NIYAS G++ A +R
Sbjct: 432 PTAAVWGALLGSCRMHKNAKIGQFAADHVFELDPDDTGPPVLLYNIYASTGQWDAAARVR 491
Query: 454 KNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDS 513
K M+ V K P CSW+E+E VHMF D +HP I + E+I +R+AGY P++
Sbjct: 492 KMMKATGVKKEPACSWVEIENSVHMFVAND-DTHPRSEEIYKKWEEISIQIRKAGYVPNT 550
Query: 514 SFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKV 573
+VL VDE+E+ L+YHSEK+A+A+ L+ +P G IR+MKN+R+CGDCHSA + ISKV
Sbjct: 551 DYVLLHVDEQERQAKLQYHSEKIALAFALINMPLGATIRIMKNIRICGDCHSAFRYISKV 610
Query: 574 MGREIILRDANRFHHFKDGLCSCRDY 599
REI++RD NRFHHF G CSC DY
Sbjct: 611 FKREIVVRDTNRFHHFSSGSCSCGDY 636
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 120/264 (45%), Gaps = 16/264 (6%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM------PEKNVVSWTVMLGGFIRDSRID 54
MP R++ SWT+++ GY + M EA L M P + + G S I
Sbjct: 125 MPARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIG 184
Query: 55 DARRLFDMMPE--KDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+ + + DV + ++ Y + GR+D +FD++ KN +SW +I+G+
Sbjct: 185 EQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARK 244
Query: 113 NRIDVARKLFEVMP----EKNEVSWTAMLMGYTQCGRI-QDAW---ELFKAMPMKSVVAS 164
+ +F M E +++++ G + Q W + K+ S
Sbjct: 245 GDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVG 304
Query: 165 NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVR 224
N+++ ++G + AR VFD++ +KD TW+ M+ + + G E + F M+K GV
Sbjct: 305 NTILDMYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVH 364
Query: 225 VNFPSLISVLSVCASLASLDHGRQ 248
+N + +S+L+ C+ + G+Q
Sbjct: 365 LNQITFLSILTACSHGGLVKEGKQ 388
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 87/173 (50%), Gaps = 2/173 (1%)
Query: 232 SVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASK 291
S+++ CA SLD R +HA L QF V++ + LI +Y KCG + + +FD ++
Sbjct: 69 SLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMPAR 128
Query: 292 DIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIF 351
D+ W S+I+GYAQ + +++L + M P+ T +L A + G +I
Sbjct: 129 DMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQI- 187
Query: 352 ESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLG 404
++ KY + ++D+ R G+++ A+ + + + + + W +L+
Sbjct: 188 HALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLE-SKNGVSWNALIA 239
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 65/140 (46%), Gaps = 12/140 (8%)
Query: 41 TVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPK---- 96
+L + + + DAR++FD + +KDVV +M+ + Q G E F+EM K
Sbjct: 305 NTILDMYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVH 364
Query: 97 KNVISWTTMISGYVNNNRIDVARKLFEVM------PEKNEVSWTAMLMGYTQCGRIQDAW 150
N I++ ++++ + + ++ F++M PE + L+G + G + DA
Sbjct: 365 LNQITFLSILTACSHGGLVKEGKQYFDMMKEYNLEPEIDHYVTVVDLLG--RAGLLNDAL 422
Query: 151 ELFKAMPMKSVVASNSMILG 170
MPMK A +LG
Sbjct: 423 VFIFKMPMKPTAAVWGALLG 442
>gi|297598748|ref|NP_001046155.2| Os02g0191200 [Oryza sativa Japonica Group]
gi|46390971|dbj|BAD16484.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50726401|dbj|BAD34012.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|255670678|dbj|BAF08069.2| Os02g0191200 [Oryza sativa Japonica Group]
Length = 744
Score = 430 bits (1105), Expect = e-117, Method: Compositional matrix adjust.
Identities = 220/609 (36%), Positives = 361/609 (59%), Gaps = 10/609 (1%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
+P +++ Y+ G+ +A F ++ K+ V+WT+++ G + + D + L
Sbjct: 137 LPSAAPFVSNSLIHMYIRLGLAADARRAFDEIHVKDAVAWTMLISGLAKMGMLCDTQLLL 196
Query: 61 DMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNV----ISWTTMISGYVNNNRID 116
P +DV++ T+++ Y + R E F M + ++ ++S ++
Sbjct: 197 SQAPVRDVISWTSLIAAYSRANRAREAVGCFKTMLSHGIAPDEVTVIAVLSACAKLKDLE 256
Query: 117 VARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVAS-NSMILGL 171
+ R L ++ EK +E A++ Y +CG A ++F A+ S N++I G
Sbjct: 257 LGRSLHLLVEEKGMPTSENLVVALIDMYAKCGDFGHAQQVFDALGRGPRPQSWNAIIDGY 316
Query: 172 GQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLI 231
++G V AR +FD+M +D T++ M+ Y G E + LF M++ +RV+ +++
Sbjct: 317 CKHGHVDVARSLFDEMEVRDIITFNSMMTGYIHSGQLREALLLFMSMRRHDLRVDNFTVV 376
Query: 232 SVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASK 291
++L+ CASL +L GR +HA + + + D+Y+ + L+ MY+KCG + + ++F +
Sbjct: 377 NLLTACASLGALQQGRALHACIEQRLVEADIYLGTALLDMYMKCGRVDEATIVFQRMGKR 436
Query: 292 DIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIF 351
D+ W ++I+G A G+G+ +L+ F++M G P+ V+ + VL+ACS++ + EGR F
Sbjct: 437 DVHTWTAMIAGLAFNGMGKAALEHFYQMRCDGFQPNSVSYIAVLTACSHSCLLNEGRLYF 496
Query: 352 ESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMK 411
+ M+ Y + P+ EHY CM+DLLGR+G +++AM L++ MP +P+A+IW S+L ACR H
Sbjct: 497 DEMRILYNIHPQIEHYGCMIDLLGRSGLLDEAMDLVKTMPIQPNAVIWASILSACRVHKH 556
Query: 412 LDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIE 471
+DLA+ AA+ LL+LEP G Y+ L NIY ++ + +++R M +R V K G S I
Sbjct: 557 IDLAQCAAEHLLKLEPDEDGVYVQLYNIYIDSRQWENASKIRMLMEERQVKKTAGYSSIT 616
Query: 472 VEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRY 531
V +VH F D SHP I+ MLE+I L+ GY P +S + DVDEEEK +L
Sbjct: 617 VAGQVHKFVVSD-KSHPRILEIIAMLEEISHRLKSLGYSPLTSQITVDVDEEEKEQALLA 675
Query: 532 HSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKD 591
HSEKLA+A+GL+ L +P+ + KNLRVC DCHSAIKLIS++ REII+RD +RFHHF++
Sbjct: 676 HSEKLAIAFGLINLAPNLPVHIRKNLRVCEDCHSAIKLISRLWNREIIVRDRSRFHHFRE 735
Query: 592 GLCSCRDYW 600
G CSC D+W
Sbjct: 736 GTCSCNDFW 744
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 119/284 (41%), Gaps = 41/284 (14%)
Query: 214 LFTLMQKEGVR---VNFPSLISVLSVCASLASLDHGRQVHAQLVRCQF-DVDVYVASVLI 269
LF M++ GVR F L S + SL +HA +R +V++ LI
Sbjct: 90 LFRRMRRAGVRPDGFTFHFLFKCSSSSSRPHSLLLCTMLHAACLRTMLPSAAPFVSNSLI 149
Query: 270 TMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGL--------------------- 308
MYI+ G + FD KD V W +ISG A+ G+
Sbjct: 150 HMYIRLGLAADARRAFDEIHVKDAVAWTMLISGLAKMGMLCDTQLLLSQAPVRDVISWTS 209
Query: 309 ----------GEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKY 358
+++ F M S G+ PD+VT++ VLSAC+ ++ GR + ++ K
Sbjct: 210 LIAAYSRANRAREAVGCFKTMLSHGIAPDEVTVIAVLSACAKLKDLELGRSLHLLVEEKG 269
Query: 359 LVEPKTEHY-ACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEV 417
+ P +E+ ++D+ + G A ++ +A+ P W +++ H +D V
Sbjct: 270 M--PTSENLVVALIDMYAKCGDFGHAQQVFDALGRGPRPQSWNAIIDGYCKHGHVD---V 324
Query: 418 AAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNV 461
A ++E ++ + + Y G+ + L +MR+ ++
Sbjct: 325 ARSLFDEMEVRDIITFNSMMTGYIHSGQLREALLLFMSMRRHDL 368
>gi|359473818|ref|XP_002263197.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Vitis vinifera]
Length = 611
Score = 430 bits (1105), Expect = e-117, Method: Compositional matrix adjust.
Identities = 220/543 (40%), Positives = 344/543 (63%), Gaps = 12/543 (2%)
Query: 67 DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLF---- 122
D+ A ++ Y + + + ++FDEMP++N IS+ T+I GY + R A +LF
Sbjct: 72 DLFAWNILLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQGYAESVRFLEAIELFVRLH 131
Query: 123 -EVMPEKNEVSWTAMLMGYTQCGRI----QDAWELFKAMPMKSVVASNSMILGLGQNGEV 177
EV+P N+ ++ ++L + Q + K V SN+++ + G +
Sbjct: 132 REVLP--NQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRM 189
Query: 178 QKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVC 237
+ + +F + ++D TW+ +I + + G + + LF M + V+ + S L C
Sbjct: 190 ENSMELFAESPHRNDVTWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRAC 249
Query: 238 ASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWN 297
ASLA+L+ G Q+H+ V+ FD D+ V + LI MY KCG + +L+FD +D V WN
Sbjct: 250 ASLAALEPGLQIHSLTVKTTFDKDIVVTNALIDMYAKCGSIKDARLVFDLMNKQDEVSWN 309
Query: 298 SIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSK 357
++ISGY+ +GLG ++L++F +M + V PD +T VGVLSAC+ G + +G+ F SM
Sbjct: 310 AMISGYSMHGLGREALRIFDKMQETEVKPDKLTFVGVLSACANAGLLDQGQAYFTSMIQD 369
Query: 358 YLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEV 417
+ +EP EHY CMV LLGR G ++ A+KLI+ +PF+P ++W +LLGAC H ++L +
Sbjct: 370 HGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDEIPFQPSVMVWRALLGACVIHNDIELGRI 429
Query: 418 AAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVH 477
+A+++L++EP++ ++LLSN+YA+ R+ +VA +RKNM+++ V K PG SWIE + VH
Sbjct: 430 SAQRVLEMEPQDKATHVLLSNMYATAKRWDNVASVRKNMKRKGVKKEPGLSWIESQGTVH 489
Query: 478 MFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLA 537
FT D SHPE +I MLE + ++AGY P+ + VL DV++EEK L HSE+LA
Sbjct: 490 SFTVGD-TSHPEVRVINGMLEWLHMKTKKAGYIPNYNVVLLDVEDEEKERLLWVHSERLA 548
Query: 538 VAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCR 597
+++G+++ P G PIR+MKNLR+C DCH+AIK ISKV+ REI++RD NRFHHF++GLCSC
Sbjct: 549 LSFGIIRTPSGSPIRIMKNLRICVDCHAAIKCISKVVQREIVVRDINRFHHFQEGLCSCG 608
Query: 598 DYW 600
DYW
Sbjct: 609 DYW 611
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 137/297 (46%), Gaps = 46/297 (15%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF---- 60
++ +W ++ YV+ + +A LF +MPE+N +S+ ++ G+ R +A LF
Sbjct: 72 DLFAWNILLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQGYAESVRFLEAIELFVRLH 131
Query: 61 -DMMPEK---------------------------------DVVAQTNMVLGYCQDGRVDE 86
+++P + DV ++ Y + GR++
Sbjct: 132 REVLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMEN 191
Query: 87 GREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPE----KNEVSWTAMLMGYTQ 142
E+F E P +N ++W T+I G+V + A +LF M E EV++++ L
Sbjct: 192 SMELFAESPHRNDVTWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRACAS 251
Query: 143 CGRIQDAWEL----FKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGM 198
++ ++ K K +V +N++I + G ++ AR+VFD M ++D+ +W+ M
Sbjct: 252 LAALEPGLQIHSLTVKTTFDKDIVVTNALIDMYAKCGSIKDARLVFDLMNKQDEVSWNAM 311
Query: 199 IKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVR 255
I Y G E + +F MQ+ V+ + + + VLS CA+ LD G+ +++
Sbjct: 312 ISGYSMHGLGREALRIFDKMQETEVKPDKLTFVGVLSACANAGLLDQGQAYFTSMIQ 368
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 92/203 (45%), Gaps = 17/203 (8%)
Query: 2 PERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRD----SRIDDAR 57
P RN V+W ++ G+V+ G +A LF M E V + V +R + ++
Sbjct: 200 PHRNDVTWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRACASLAALEPGL 259
Query: 58 RLFDMMP----EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNN 113
++ + +KD+V ++ Y + G + + R +FD M K++ +SW MISGY +
Sbjct: 260 QIHSLTVKTTFDKDIVVTNALIDMYAKCGSIKDARLVFDLMNKQDEVSWNAMISGYSMHG 319
Query: 114 RIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVAS----- 164
A ++F+ M E +++++ +L G + F +M +
Sbjct: 320 LGREALRIFDKMQETEVKPDKLTFVGVLSACANAGLLDQGQAYFTSMIQDHGIEPCIEHY 379
Query: 165 NSMILGLGQNGEVQKARVVFDQM 187
M+ LG+ G + KA + D++
Sbjct: 380 TCMVWLLGRGGHLDKAVKLIDEI 402
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/200 (20%), Positives = 93/200 (46%), Gaps = 6/200 (3%)
Query: 226 NFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIF 285
N + + L C G+ +H ++++ +D++ ++L+ MY+K L +F
Sbjct: 37 NSHAYANALQDCIQKDEPSRGKGLHCEILKRGGCLDLFAWNILLNMYVKSDFLCDASKLF 96
Query: 286 DNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVK 345
D ++ + + ++I GYA+ +++++F + V+P+ T VL AC+ +
Sbjct: 97 DEMPERNTISFVTLIQGYAESVRFLEAIELFVRLHRE-VLPNQFTFASVLQACATMEGLN 155
Query: 346 EGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
G +I K + ++D+ + G++E++M+L P D + W +++
Sbjct: 156 LGNQI-HCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMELFAESPHRND-VTWNTVIVG 213
Query: 406 CRTHMKLDLAEVAAKKLLQL 425
H++L E A + L +
Sbjct: 214 ---HVQLGDGEKALRLFLNM 230
>gi|357453021|ref|XP_003596787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355485835|gb|AES67038.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 867
Score = 430 bits (1105), Expect = e-117, Method: Compositional matrix adjust.
Identities = 231/614 (37%), Positives = 356/614 (57%), Gaps = 15/614 (2%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
M R+ V+W +M+ GYV G E +F +M V + I+ L
Sbjct: 255 MEIRDWVTWNSMIAGYVRNGQDLEVFEIFNKMQLAGVKPTHMTFASVIKSCASLRELALV 314
Query: 61 DMMPEK--------DVVAQTNMVLGYCQDGRVDEGREIFDEMPK-KNVISWTTMISGYVN 111
+M K D + T +++ + +D+ +F M + KNV+SWT MISG +
Sbjct: 315 KLMQCKALKSGFTTDQIVITALMVALSKCKEMDDALSLFSLMEEGKNVVSWTAMISGCLQ 374
Query: 112 NNRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSM 167
N D A LF M + N +++A+L + + E+ K +S ++
Sbjct: 375 NGGNDQAVNLFSQMRREGVKPNHFTYSAILTVHYPVFVSEMHAEVIKTNYERSSSVGTAL 434
Query: 168 ILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNF 227
+ + G A VF+ + KD WS M+ Y + G E LF + KEG++ N
Sbjct: 435 LDAYVKLGNTIDAVKVFEIIEAKDLMAWSAMLAGYAQTGETEEAAKLFHQLIKEGIKPNE 494
Query: 228 PSLISVLSVCAS-LASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFD 286
+ SV++ CAS A+ + G+Q HA ++ + + + V+S L+TMY K G + +F
Sbjct: 495 FTFSSVINACASPTAAAEQGKQFHAYAIKMRLNNALCVSSALVTMYAKRGNIDSAHEVFK 554
Query: 287 NFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKE 346
+D+V WNS+ISGY+Q+G +K+L+VF EM + D VT +GV++AC++ G V++
Sbjct: 555 RQKERDLVSWNSMISGYSQHGQAKKALEVFDEMQKRNMDVDAVTFIGVITACTHAGLVEK 614
Query: 347 GREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGAC 406
G++ F SM + + + P +HY+CM+DL RAG +E AM +I MPF P A +W +LLGA
Sbjct: 615 GQKYFNSMINDHHINPTMKHYSCMIDLYSRAGMLEKAMGIINEMPFPPGATVWRTLLGAA 674
Query: 407 RTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPG 466
R H ++L E+AA+KL+ L+P+++ Y+LLSN+YA+ G + + +RK M KR V K PG
Sbjct: 675 RVHRNVELGELAAEKLISLQPEDSAAYVLLSNMYAAAGNWQERTNVRKLMDKRKVKKEPG 734
Query: 467 CSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKV 526
SWIEV+ K + F D ++HP I L ++ L++AGY PD+ V HD+++E+K
Sbjct: 735 YSWIEVKNKTYSFLAGD-LTHPLSNQIYSKLSELSIRLKDAGYQPDTKNVFHDIEDEQKE 793
Query: 527 HSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRF 586
L +HSE+LA+A+GL+ P +PI+++KNLRVCGDCH+ KL+S V R I++RD+NRF
Sbjct: 794 TILSHHSERLAIAFGLIATPPEIPIQIVKNLRVCGDCHNFTKLVSLVEQRYIVVRDSNRF 853
Query: 587 HHFKDGLCSCRDYW 600
HHFKDGLCSC DYW
Sbjct: 854 HHFKDGLCSCGDYW 867
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 116/460 (25%), Positives = 203/460 (44%), Gaps = 63/460 (13%)
Query: 25 AGTLFWQMPEK--NVVSWTVMLGGFIRDSRIDDARRLF------DMMPEKDVVAQTNMVL 76
A LF ++P + + +L + RD + +A LF + P++ ++ +
Sbjct: 44 AHNLFDKIPHRPTTLKEHNQLLFSYSRDKQTKEALNLFVSLLHSSLQPDESTLSCVFNIC 103
Query: 77 GYCQDGRVDEGREIFDEMPKKNVISW----TTMISGYVNNNRIDVARKLFEVMPEKNEVS 132
DG++ GR++ + K ++ T+++ Y+ ++ R++F+ M E+N VS
Sbjct: 104 AGSLDGKL--GRQVHCQCVKFGLVDHVSVGTSLVDMYMKTENVNDGRRVFDEMGERNVVS 161
Query: 133 WTAMLMGYTQCGRIQDAWELFKAMPMKSVVAS---------------------------- 164
WT++L GY+ G WELF M + V+ +
Sbjct: 162 WTSLLAGYSWNGLYGYVWELFCQMQYEGVLPNRYTVSTVIAALVNEGVVGIGLQVHAMVV 221
Query: 165 -----------NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVID 213
NS+I + G ++ AR VFD+M +D TW+ MI Y R G +LEV +
Sbjct: 222 KHGFEEAIPVFNSLISLYSRLGMLRDARDVFDKMEIRDWVTWNSMIAGYVRNGQDLEVFE 281
Query: 214 LFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYI 273
+F MQ GV+ + SV+ CASL L + + + ++ F D V + L+
Sbjct: 282 IFNKMQLAGVKPTHMTFASVIKSCASLRELALVKLMQCKALKSGFTTDQIVITALMVALS 341
Query: 274 KCGELVKGKLIFDNF-ASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLV 332
KC E+ +F K++V W ++ISG Q G ++++ +F +M GV P+ T
Sbjct: 342 KCKEMDDALSLFSLMEEGKNVVSWTAMISGCLQNGGNDQAVNLFSQMRREGVKPNHFTYS 401
Query: 333 GVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPF 392
+L+ Y V E E +K+ Y E + ++D + G DA+K+ E +
Sbjct: 402 AILTV-HYPVFVSEMHA--EVIKTNY--ERSSSVGTALLDAYVKLGNTIDAVKVFEIIE- 455
Query: 393 EPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGP 432
D + W ++L + + E AAK QL + P
Sbjct: 456 AKDLMAWSAMLAG---YAQTGETEEAAKLFHQLIKEGIKP 492
>gi|242076924|ref|XP_002448398.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
gi|241939581|gb|EES12726.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
Length = 865
Score = 430 bits (1105), Expect = e-117, Method: Compositional matrix adjust.
Identities = 232/648 (35%), Positives = 367/648 (56%), Gaps = 60/648 (9%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV----VSWTVMLGGFIRDSRI--- 53
MPER+VVSW MV + G + EA + M K V ++T L R S +
Sbjct: 230 MPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWG 289
Query: 54 --------------------------------DDARRLFDMMPEKDVVAQTNMVLGYCQD 81
+A+ +F+ + +++ VA T ++ G+ Q
Sbjct: 290 KQLHAQVIRNLPCIDPYVASALVELYAKCGCFKEAKGVFNSLHDRNNVAWTVLIAGFLQH 349
Query: 82 GRVDEGREIFDEMPKK----NVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSW---- 133
G E E+F++M + + + T+ISG + + + R+L + + ++
Sbjct: 350 GCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVS 409
Query: 134 TAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDA 193
+++ Y +C +Q A +F+ M K +V+ SMI Q G + KAR FD M K+
Sbjct: 410 NSLISMYAKCDNLQSAESIFRFMNEKDIVSWTSMITAHSQVGNIAKAREFFDGMSTKNVI 469
Query: 194 TWSGMIKVYERKGYELEVIDLFTLMQKE-GVRVNFPSLISVLSVCASLASLDHGRQVHAQ 252
TW+ M+ Y + G E + + ++ +M E VR ++ + +++ CA L + G Q+ +
Sbjct: 470 TWNAMLGAYIQHGAEEDGLRMYNVMLSEKDVRPDWVTYVTLFKGCADLGANKLGDQIIGR 529
Query: 253 LVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKS 312
V+ +D VA+ +ITMY KCG +++ + +FD KDIV WN++I+GY+Q+G+G+++
Sbjct: 530 TVKVGLILDTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQA 589
Query: 313 LKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVD 372
+++F ++ G PD ++ V VLS CS++G V+EG+ F+ MK + + P EH++CMVD
Sbjct: 590 IEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGKSYFDMMKRVHNISPGLEHFSCMVD 649
Query: 373 LLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGP 432
LLGRAG + +A LI+ MP +P A +WG+LL AC+ H +LAE+AAK + +L+ ++G
Sbjct: 650 LLGRAGHLTEAKDLIDEMPMKPTAEVWGALLSACKIHGNNELAELAAKHVFELDSPDSGS 709
Query: 433 YILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPM 492
Y+L++ IYA G+ D A++RK MR + + K PG SW+EV KVH+F D VSHP+
Sbjct: 710 YMLMAKIYADAGKSDDSAQIRKLMRDKGIKKNPGYSWMEVNNKVHVFKADD-VSHPQVIA 768
Query: 493 IMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIR 552
I + L+++ + GY S ++H HSEKLAVA+GL+ LP +PI
Sbjct: 769 IRKKLDELMEKIARLGYVRTDS-------PRSEIH----HSEKLAVAFGLMSLPAWMPIH 817
Query: 553 VMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
+MKNLR+CGDCH+ IKLIS V GRE ++RDA RFHHF G CSC DYW
Sbjct: 818 IMKNLRICGDCHTVIKLISSVTGREFVIRDAVRFHHFNGGSCSCGDYW 865
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 113/476 (23%), Positives = 212/476 (44%), Gaps = 48/476 (10%)
Query: 41 TVMLGGFIRDSRIDDARRLF-DMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNV 99
+L ++ + DARRL + +V+ M+ GY + GR+ + E+F MP ++V
Sbjct: 43 NTLLHAYLSCGALPDARRLLLTDIAHPNVITHNVMLNGYVKLGRLSDAVELFGRMPARDV 102
Query: 100 ISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYT------------------ 141
SW T++SGY + + + + F M + S A Y
Sbjct: 103 ASWNTLMSGYFQSQQYLASLESFVSMHRSGDSSPNAFTFAYAMKSCGALGERSLALQLLG 162
Query: 142 ----------------------QCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQK 179
+CG + A LF + ++ NSM++G + V
Sbjct: 163 MVQKFGSQDDSDVAAALVDMFVRCGTVDLASRLFVRIKEPTIFCRNSMLVGYVKTYGVDH 222
Query: 180 ARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCAS 239
A +FD M E+D +W+ M+ + G E +D+ MQ +GVR++ + S L+ CA
Sbjct: 223 ALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACAR 282
Query: 240 LASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSI 299
L+SL G+Q+HAQ++R +D YVAS L+ +Y KCG + K +F++ ++ V W +
Sbjct: 283 LSSLRWGKQLHAQVIRNLPCIDPYVASALVELYAKCGCFKEAKGVFNSLHDRNNVAWTVL 342
Query: 300 ISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFE-SMKSKY 358
I+G+ Q+G +S+++F++M + + D L ++S C + GR++ +KS
Sbjct: 343 IAGFLQHGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQ 402
Query: 359 LVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVA 418
+ + ++ + + ++ A + M E D + W S++ A H ++ A
Sbjct: 403 IQAVVVSN--SLISMYAKCDNLQSAESIFRFMN-EKDIVSWTSMITA---HSQVGNIAKA 456
Query: 419 AKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEK 474
+ + KN + + Y G D + M ++P +++ + K
Sbjct: 457 REFFDGMSTKNVITWNAMLGAYIQHGAEEDGLRMYNVMLSEKDVRPDWVTYVTLFK 512
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 110/493 (22%), Positives = 221/493 (44%), Gaps = 90/493 (18%)
Query: 1 MPERNVVSWTAMVRGYVE--------EGMIT---------EAGTLFWQMPEKNVV---SW 40
MP R+V SW ++ GY + E ++ A T + M + S
Sbjct: 97 MPARDVASWNTLMSGYFQSQQYLASLESFVSMHRSGDSSPNAFTFAYAMKSCGALGERSL 156
Query: 41 TVMLGG--------------------FIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQ 80
+ L G F+R +D A RLF + E + + +M++GY +
Sbjct: 157 ALQLLGMVQKFGSQDDSDVAAALVDMFVRCGTVDLASRLFVRIKEPTIFCRNSMLVGYVK 216
Query: 81 DGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEK----NEVSWTAM 136
VD E+FD MP+++V+SW M+S + R+ A + M K + ++T+
Sbjct: 217 TYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSS 276
Query: 137 LMGYTQCGRIQDA-W------ELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMRE 189
L T C R+ W ++ + +P +++++ + G ++A+ VF+ + +
Sbjct: 277 L---TACARLSSLRWGKQLHAQVIRNLPCIDPYVASALVELYAKCGCFKEAKGVFNSLHD 333
Query: 190 KDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQV 249
+++ W+ +I + + G E ++LF M+ E + ++ +L +++S C S L GRQ+
Sbjct: 334 RNNVAWTVLIAGFLQHGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQL 393
Query: 250 HAQLVRCQFDVDVYVASVLITMYIKC-------------------------------GEL 278
H+ ++ V V++ LI+MY KC G +
Sbjct: 394 HSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAESIFRFMNEKDIVSWTSMITAHSQVGNI 453
Query: 279 VKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFS-SGVMPDDVTLVGVLSA 337
K + FD ++K+++ WN+++ Y Q+G E L++++ M S V PD VT V +
Sbjct: 454 AKAREFFDGMSTKNVITWNAMLGAYIQHGAEEDGLRMYNVMLSEKDVRPDWVTYVTLFKG 513
Query: 338 CSYTGKVKEGREIF-ESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDA 396
C+ G K G +I ++K +++ + ++ + + G++ +A K+ + + + D
Sbjct: 514 CADLGANKLGDQIIGRTVKVGLILDTSVAN--AVITMYSKCGRILEARKVFDFLNVK-DI 570
Query: 397 IIWGSLLGACRTH 409
+ W +++ H
Sbjct: 571 VSWNAMITGYSQH 583
>gi|413925171|gb|AFW65103.1| hypothetical protein ZEAMMB73_773985 [Zea mays]
Length = 567
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 213/508 (41%), Positives = 322/508 (63%), Gaps = 4/508 (0%)
Query: 1 MPERNVVSWTAMVRGYVEEG--MITEAGTLFWQ-MPEKNVVSWTVMLGGFIRDSRIDDAR 57
M R+VVSW A++ G + A LF + MP ++VVSW ++ G + +D A
Sbjct: 41 MTHRDVVSWNALLTALWRAGRHHLPAARRLFDEAMPSRDVVSWNSIIAGCLAHGDLDAAS 100
Query: 58 RLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDV 117
F PE++V M+ G + GRV + + +FDEMP++NV+S+TTM+ ++
Sbjct: 101 AYFAGAPERNVATWNAMLAGLVRLGRVVDAQRLFDEMPERNVVSYTTMVDWLARRGEVER 160
Query: 118 ARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEV 177
AR++F+ MP++N VSW AM+ G + G +A ELF+AMP K+VVA +MI G + G+V
Sbjct: 161 AREVFDSMPDRNLVSWAAMISGCVENGMFVEARELFEAMPEKNVVACTAMITGHCKQGDV 220
Query: 178 QKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVC 237
AR +FD +R KD +W+ MI Y G+ E + L LM +EGV+ + +LI+VL+ C
Sbjct: 221 DSARRLFDGIRAKDVISWNAMIAGYVHNGHGEEAMRLHALMFREGVKPDHATLIAVLTAC 280
Query: 238 ASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWN 297
++LA L G+ HA ++ + + ++ L+TMY KCG + + +L+F N +KDIV WN
Sbjct: 281 SALALLRQGKSTHAIAIKAMLESGISFSNALMTMYSKCGNVGESELVFINLRTKDIVSWN 340
Query: 298 SIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSK 357
+II+ YAQ+G +K + +FHEM +G++PDD+T + VLSAC + G V ++F+ M SK
Sbjct: 341 TIIAAYAQHGKYQKVIALFHEMEVTGLIPDDITFLSVLSACGHVGMVDASLKLFDLMSSK 400
Query: 358 YLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEV 417
Y + P+ EHYAC+VD+L RAGQ+E A I+ MP + + +WGSLLGAC+ H + L E+
Sbjct: 401 YAISPRAEHYACIVDILSRAGQLEKASSYIKHMPLKAEKNVWGSLLGACQIHGNVQLGEL 460
Query: 418 AAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVH 477
AAK L+Q + +++GPY++LSNIYA+ G + V ++R M++R V K PG SW E+ +VH
Sbjct: 461 AAKMLVQSDSQSSGPYVILSNIYAAAGMWGQVNQIRGQMKERGVKKQPGYSWTEIGNEVH 520
Query: 478 MFTGRDCVSHPEHPMIMRMLEKIGGLLR 505
MF G D SHPE I+ L KI +R
Sbjct: 521 MFVGGDA-SHPEMRKIISELRKISFHMR 547
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 114/254 (44%), Gaps = 23/254 (9%)
Query: 155 AMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDL 214
++ + ++ N I L + G+V AR VFD M +D +W+ ++ R G +
Sbjct: 9 SLAARRLLRDNQRISALARAGDVAAARRVFDAMTHRDVVSWNALLTALWRAGRH-HLPAA 67
Query: 215 FTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIK 274
L + + S S+++ C + LD A + +V + ++ ++
Sbjct: 68 RRLFDEAMPSRDVVSWNSIIAGCLAHGDLDAASAYFAGAP----ERNVATWNAMLAGLVR 123
Query: 275 CGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDD--VTLV 332
G +V + +FD +++V + +++ A+ G E++ +VF MPD V+
Sbjct: 124 LGRVVDAQRLFDEMPERNVVSYTTMVDWLARRGEVERAREVFDS------MPDRNLVSWA 177
Query: 333 GVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLG--RAGQVEDAMKLIEAM 390
++S C G E RE+FE+M K +V AC + G + G V+ A +L + +
Sbjct: 178 AMISGCVENGMFVEARELFEAMPEKNVV-------ACTAMITGHCKQGDVDSARRLFDGI 230
Query: 391 PFEPDAIIWGSLLG 404
+ D I W +++
Sbjct: 231 RAK-DVISWNAMIA 243
>gi|359472776|ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Vitis vinifera]
Length = 896
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 242/644 (37%), Positives = 353/644 (54%), Gaps = 52/644 (8%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV----VSWTVMLGGFIRDSRIDDARR 58
+R++VSW M+ + + +EA F M + V V+ +L R+D +
Sbjct: 259 DRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDVGKE 318
Query: 59 LFD-MMPEKDVVAQT----NMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNN 113
+ ++ D++ + +V YC +V+ GR +FD + + + W MISGY N
Sbjct: 319 IHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYARNG 378
Query: 114 RIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQ 173
+ A LF M + +L T + A +A K + ++ LG +
Sbjct: 379 LDEKALILFIEM-----IKVAGLLPNTTTMASVMPACVHCEAFSNKESIHGYAVKLGFKE 433
Query: 174 NGEVQKA--------------RVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQ 219
+ VQ A +FD M +D +W+ MI Y G + L MQ
Sbjct: 434 DRYVQNALMDMYSRMGKMDISETIFDSMEVRDRVSWNTMITGYVLSGRYSNALVLLHEMQ 493
Query: 220 K-----------------EGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDV 262
+ + N +L++VL CA+LA++ G+++HA +R D+
Sbjct: 494 RMENTKDVKKDDNDDEKGGPYKPNAITLMTVLPGCAALAAIAKGKEIHAYAIRNMLASDI 553
Query: 263 YVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSS 322
V S L+ MY KCG L + +F+ +K+++ WN +I +G GE++L++F M +
Sbjct: 554 TVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGMHGKGEEALELFKNMVAE 613
Query: 323 G-----VMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRA 377
P++VT + V +ACS++G + EG +F MK + VEP ++HYAC+VDLLGRA
Sbjct: 614 AGRGGEAKPNEVTFITVFAACSHSGLISEGLNLFYRMKHDHGVEPTSDHYACVVDLLGRA 673
Query: 378 GQVEDAMKLIEAMPFEPDAI-IWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILL 436
GQ+E+A +L+ MP E D + W SLLGACR H ++L EVAAK LL LEP A Y+LL
Sbjct: 674 GQLEEAYELVNTMPAEFDKVGAWSSLLGACRIHQNVELGEVAAKNLLHLEPNVASHYVLL 733
Query: 437 SNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRM 496
SNIY+S G ++ E+RKNMR+ V K PGCSWIE +VH F D VSHP+ +
Sbjct: 734 SNIYSSAGLWNKAMEVRKNMRQMGVKKEPGCSWIEFRDEVHKFMAGD-VSHPQSEQLHGF 792
Query: 497 LEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKN 556
LE + +R+ GY PD+S VLH+VDE+EK + L HSEKLA+A+G++ P G IRV KN
Sbjct: 793 LETLSEKMRKEGYVPDTSCVLHNVDEDEKENLLCGHSEKLAIAFGILNTPPGTTIRVAKN 852
Query: 557 LRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
LRVC DCH+A K ISK+M REII+RD RFHHFK+G CSC DYW
Sbjct: 853 LRVCNDCHAATKFISKIMEREIIVRDVRRFHHFKEGTCSCGDYW 896
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 101/424 (23%), Positives = 195/424 (45%), Gaps = 25/424 (5%)
Query: 2 PERNVVSWTAMVRGYVEEGMITEAGTLFWQM------PEKNVVSWTVMLGGFIRD----S 51
P R+ SW +R EA + + +M P+ + ++D
Sbjct: 53 PSRSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGE 112
Query: 52 RIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVN 111
+I A F VA T +V Y + G + + ++FD + ++ +SW + I+
Sbjct: 113 QIHAAAVKFGYGSSSVTVANT-LVNMYGKCGGIGDVCKVFDRITDRDQVSWNSFIAALCR 171
Query: 112 NNRIDVARKLFEVMPEKN-EVSWTAMLMGYTQCGR--IQDAWELFKAMPMKSV------- 161
+ + A + F M +N E+S ++ C + L K + S+
Sbjct: 172 FEKWEQALEAFRAMQMENMELSSFTLVSVALACSNLGVMHGLRLGKQLHGYSLRVGDQKT 231
Query: 162 VASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKE 221
+N+++ + G V ++ +F+ ++D +W+ MI + + E + F LM E
Sbjct: 232 FTNNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLE 291
Query: 222 GVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDV-DVYVASVLITMYIKCGELVK 280
GV ++ ++ SVL C+ L LD G+++HA ++R + + +V S L+ MY C ++
Sbjct: 292 GVELDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVES 351
Query: 281 GKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFS-SGVMPDDVTLVGVLSACS 339
G+ +FD+ + I +WN++ISGYA+ GL EK+L +F EM +G++P+ T+ V+ AC
Sbjct: 352 GRRVFDHILGRRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACV 411
Query: 340 YTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIW 399
+ I E + A M D+ R G+++ + + ++M D + W
Sbjct: 412 HCEAFSNKESIHGYAVKLGFKEDRYVQNALM-DMYSRMGKMDISETIFDSMEVR-DRVSW 469
Query: 400 GSLL 403
+++
Sbjct: 470 NTMI 473
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 93/361 (25%), Positives = 164/361 (45%), Gaps = 29/361 (8%)
Query: 78 YCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVM----PEKNEVSW 133
Y + GRVD+ + +F+ ++++SW TMIS + ++R A F +M E + V+
Sbjct: 241 YAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTI 300
Query: 134 TAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMI----LGLGQNG-EVQKARVVFDQMR 188
++L + R+ E+ + + + NS + + + N +V+ R VFD +
Sbjct: 301 ASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHIL 360
Query: 189 EKDDATWSGMIKVYERKGYELEVIDLFTLMQK-EGVRVNFPSLISVLSVCASLASLDHGR 247
+ W+ MI Y R G + + + LF M K G+ N ++ SV+ C + +
Sbjct: 361 GRRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHCEAFSNKE 420
Query: 248 QVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYG 307
+H V+ F D YV + L+ MY + G++ + IFD+ +D V WN++I+GY G
Sbjct: 421 SIHGYAVKLGFKEDRYVQNALMDMYSRMGKMDISETIFDSMEVRDRVSWNTMITGYVLSG 480
Query: 308 LGEKSLKVFHEM-----------------FSSGVMPDDVTLVGVLSACSYTGKVKEGREI 350
+L + HEM P+ +TL+ VL C+ + +G+EI
Sbjct: 481 RYSNALVLLHEMQRMENTKDVKKDDNDDEKGGPYKPNAITLMTVLPGCAALAAIAKGKEI 540
Query: 351 FESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHM 410
L T A +VD+ + G + + ++ MP + I W L+ AC H
Sbjct: 541 HAYAIRNMLASDITVGSA-LVDMYAKCGCLNLSRRVFNEMP-NKNVITWNVLIMACGMHG 598
Query: 411 K 411
K
Sbjct: 599 K 599
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 100/219 (45%), Gaps = 5/219 (2%)
Query: 190 KDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQV 249
+ A+W ++ R E I + M G R + + +VL + L L G Q+
Sbjct: 55 RSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGEQI 114
Query: 250 HAQLVRCQF-DVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGL 308
HA V+ + V VA+ L+ MY KCG + +FD +D V WNS I+ ++
Sbjct: 115 HAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDVCKVFDRITDRDQVSWNSFIAALCRFEK 174
Query: 309 GEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLV--EPKTEH 366
E++L+ F M + TLV V ACS G V G + + + L + KT
Sbjct: 175 WEQALEAFRAMQMENMELSSFTLVSVALACSNLG-VMHGLRLGKQLHGYSLRVGDQKTFT 233
Query: 367 YACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
++ + + G+V+D+ L E+ + D + W +++ +
Sbjct: 234 NNALMAMYAKLGRVDDSKALFESF-VDRDMVSWNTMISS 271
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 100/240 (41%), Gaps = 41/240 (17%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM--------------------PEK-NVVS 39
M R+ VSW M+ GYV G + A L +M P K N ++
Sbjct: 461 MEVRDRVSWNTMITGYVLSGRYSNALVLLHEMQRMENTKDVKKDDNDDEKGGPYKPNAIT 520
Query: 40 WTVMLGGFIRDSRIDDARRLFDM----MPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMP 95
+L G + I + + M D+ + +V Y + G ++ R +F+EMP
Sbjct: 521 LMTVLPGCAALAAIAKGKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMP 580
Query: 96 KKNVISWTTMISGYVNNNRIDVARKLFEVM---------PEKNEVSWTAMLMGYTQCGRI 146
KNVI+W +I + + + A +LF+ M + NEV++ + + G I
Sbjct: 581 NKNVITWNVLIMACGMHGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSGLI 640
Query: 147 QDAWELFKAMPMKSVVASNS-----MILGLGQNGEVQKARVVFDQMREKDD--ATWSGMI 199
+ LF M V S ++ LG+ G++++A + + M + D WS ++
Sbjct: 641 SEGLNLFYRMKHDHGVEPTSDHYACVVDLLGRAGQLEEAYELVNTMPAEFDKVGAWSSLL 700
>gi|188509980|gb|ACD56662.1| putative pentatricopeptide [Gossypium arboreum]
Length = 805
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 231/657 (35%), Positives = 367/657 (55%), Gaps = 68/657 (10%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
M ++NV W MV Y + G E+ LF M EK I R + A LF
Sbjct: 160 MEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKG-----------IEGKRPESAFELF 208
Query: 61 DMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMP------------------------- 95
D + ++DV++ +M+ GY +G + G I+ +M
Sbjct: 209 DKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLS 268
Query: 96 --------------KKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYT 141
++ + T++ Y +D A ++FE M E+N VSWT+M+ GYT
Sbjct: 269 LGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYT 328
Query: 142 QCGRIQDAWELFKAMPMKSV----VASNSMILGLGQNGEVQKARVVFDQMR----EKDDA 193
+ GR A +L + M + V VA S++ ++G + + V D ++ E +
Sbjct: 329 RDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMESNLF 388
Query: 194 TWSGMIKVYERKGYELEVIDLFTLMQKEGV----------RVNFPSLISVLSVCASLASL 243
+ ++ +Y + G +F+ M + + + + ++ VL CASL++L
Sbjct: 389 VCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMIGELKPDSRTMACVLPACASLSAL 448
Query: 244 DHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGY 303
+ G+++H ++R + D +VA+ L+ +Y+KCG L +L+FD SKD+V W +I+GY
Sbjct: 449 ERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGY 508
Query: 304 AQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPK 363
+G G +++ F+EM +G+ PD+V+ + +L ACS++G +++G F MK+ + +EPK
Sbjct: 509 GMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPK 568
Query: 364 TEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLL 423
EHYACMVDLL R G + A + +E +P PDA IWG+LL CR + ++LAE A+++
Sbjct: 569 LEHYACMVDLLSRTGNLSKAYEFMETLPIAPDATIWGALLCGCRNYHDIELAEKVAERVF 628
Query: 424 QLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRD 483
+LEP+N G Y+LL+NIYA ++ +V LR+ + K+ + K PGCSWIE++ KV++F +
Sbjct: 629 ELEPENTGYYVLLANIYAEAEKWEEVKRLREKIGKQGLRKNPGCSWIEIKGKVNLFVSGN 688
Query: 484 CVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLV 543
SHP I +L+K+ ++E G+ P + + L + DE +K +L HSEKLA+A+GL+
Sbjct: 689 NSSHPHSKNIESLLKKMRRKMKEEGHFPKTKYALINADEMQKEMALCGHSEKLAMAFGLL 748
Query: 544 KLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
LP IRV KNLRVCGDCH K +SK REI+LRD+NRFHHFKDG CSCR +W
Sbjct: 749 TLPPRKTIRVTKNLRVCGDCHEMAKFMSKETRREIVLRDSNRFHHFKDGYCSCRGFW 805
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 102/388 (26%), Positives = 182/388 (46%), Gaps = 57/388 (14%)
Query: 53 IDDARRLFDMMPEKDVVAQTNMVLGYCQDG--------------------RVDEGREIFD 92
+ + RR+FD M +K+V MV Y + G R + E+FD
Sbjct: 150 LKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESAFELFD 209
Query: 93 EMPKKNVISWTTMISGYVNNNRIDVARKLFEVM----PEKNEVSWTAMLMGYTQCGRIQD 148
++ ++VISW +MISGYV+N + +++ M + + + ++L+G G +
Sbjct: 210 KLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSL 269
Query: 149 AWELFKAMPMKS-----VVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYE 203
+ ++ +KS + SN+++ + G++ A VF++M E++ +W+ MI Y
Sbjct: 270 G-KAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYT 328
Query: 204 RKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVY 263
R G I L M+KEGV+++ ++ S+L CA SLD+G+ VH + + +++
Sbjct: 329 RDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMESNLF 388
Query: 264 VASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSG 323
V + L+ MY KCG + +F KDI+ WN++I GE
Sbjct: 389 VCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMI--------GE------------- 427
Query: 324 VMPDDVTLVGVLSACSYTGKVKEGREIFES-MKSKYLVEPKTEHYA-CMVDLLGRAGQVE 381
+ PD T+ VL AC+ ++ G+EI +++ Y H A +VDL + G +
Sbjct: 428 LKPDSRTMACVLPACASLSALERGKEIHGYILRNGY---SSDRHVANALVDLYVKCGVLG 484
Query: 382 DAMKLIEAMPFEPDAIIWGSLLGACRTH 409
A L + +P D + W ++ H
Sbjct: 485 LARLLFDMIP-SKDLVSWTVMIAGYGMH 511
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 104/244 (42%), Gaps = 57/244 (23%)
Query: 232 SVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFD----- 286
SVL +CA L S G++VH+ + VD + L++ Y CG+L +G+ +FD
Sbjct: 104 SVLQLCAGLKSFTDGKKVHSIIKSNSVGVDGALGLKLVSFYATCGDLKEGRRVFDTMEKK 163
Query: 287 -----NF-----------------------------------------ASKDIVMWNSII 300
NF +D++ WNS+I
Sbjct: 164 NVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMI 223
Query: 301 SGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLV 360
SGY GL E+ L ++ +M G+ D T++ VL C+ +G + G+ + S+ K
Sbjct: 224 SGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAV-HSLAIKSSF 282
Query: 361 EPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAK 420
E + ++D+ + G ++ A+++ E M E + + W S++ + D A
Sbjct: 283 ERRINFSNTLLDMYSKCGDLDGALRVFEKMG-ERNVVSWTSMIAGYTRDGRSD----GAI 337
Query: 421 KLLQ 424
KLLQ
Sbjct: 338 KLLQ 341
>gi|356565095|ref|XP_003550780.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Glycine max]
Length = 640
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 215/502 (42%), Positives = 318/502 (63%), Gaps = 7/502 (1%)
Query: 103 TTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVV 162
TT+IS Y AR++F+ M E N V+W A+L +CG ++ A ++F MP++++
Sbjct: 142 TTLISMYAECGDSGSARRVFDEMSEPNVVTWNAVLTAAFRCGDVEGAQDVFGCMPVRNLT 201
Query: 163 ASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEG 222
+ N M+ G + GE+ AR VF +M +D+ +WS MI + G E F + +E
Sbjct: 202 SWNGMLAGYAKAGELGLARRVFYEMPLRDEVSWSTMIVGFAHNGCFDEAFGFFRELLREE 261
Query: 223 VRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASV---LITMYIKCGELV 279
+R N SL VLS CA + + G+ +H + + F +YV SV LI Y KCG +
Sbjct: 262 IRTNEVSLTGVLSACAQAGAFEFGKILHGFVEKAGF---LYVGSVNNALIDTYSKCGNVA 318
Query: 280 KGKLIFDNF-ASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSAC 338
+L+F N ++ IV W SII+G A +G GE+++++FHEM SGV PD +T + +L AC
Sbjct: 319 MARLVFQNMPVARSIVSWTSIIAGLAMHGCGEEAIQLFHEMEESGVRPDGITFISLLYAC 378
Query: 339 SYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAII 398
S++G V+EG +F MK+ Y +EP EHY CMVDL GRA +++ A + I MP P+AII
Sbjct: 379 SHSGLVEEGCGLFSKMKNLYGIEPAIEHYGCMVDLYGRAARLQKAYEFICEMPVSPNAII 438
Query: 399 WGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRK 458
W +LLGAC H +++AE+ +L +++P N+G ++LLSN+YA G++ DV+ +R+ M +
Sbjct: 439 WRTLLGACSIHGNIEMAELVKARLAEMDPDNSGDHVLLSNVYAVAGKWKDVSSIRRTMTE 498
Query: 459 RNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLH 518
++ K PG S IE++K ++ F + + ++ E + L EAGY P VLH
Sbjct: 499 HSMKKTPGWSMIEIDKVIYGFVAGEKPNEVTEEAHEKLREIMLRLRTEAGYAPQLRSVLH 558
Query: 519 DVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREI 578
D++EEEK S+ HSEKLA A+G+ KLP+G +R++KNLRVCGDCH+ +KLISKV EI
Sbjct: 559 DIEEEEKEDSVSKHSEKLAAAFGIAKLPKGRILRIVKNLRVCGDCHTVMKLISKVYQVEI 618
Query: 579 ILRDANRFHHFKDGLCSCRDYW 600
I+RD +RFH FKDG CSCRDYW
Sbjct: 619 IVRDRSRFHSFKDGFCSCRDYW 640
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 152/310 (49%), Gaps = 13/310 (4%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVV 69
T ++ Y E G A +F +M E NVV+W +L R ++ A+ +F MP +++
Sbjct: 142 TTLISMYAECGDSGSARRVFDEMSEPNVVTWNAVLTAAFRCGDVEGAQDVFGCMPVRNLT 201
Query: 70 AQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLF-EVMPEK 128
+ M+ GY + G + R +F EMP ++ +SW+TMI G+ +N D A F E++ E+
Sbjct: 202 SWNGMLAGYAKAGELGLARRVFYEMPLRDEVSWSTMIVGFAHNGCFDEAFGFFRELLREE 261
Query: 129 ---NEVSWTAMLMGYTQCGRIQDAWELF----KAMPMKSVVASNSMILGLGQNGEVQKAR 181
NEVS T +L Q G + L KA + +N++I + G V AR
Sbjct: 262 IRTNEVSLTGVLSACAQAGAFEFGKILHGFVEKAGFLYVGSVNNALIDTYSKCGNVAMAR 321
Query: 182 VVFDQMR-EKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASL 240
+VF M + +W+ +I G E I LF M++ GVR + + IS+L C+
Sbjct: 322 LVFQNMPVARSIVSWTSIIAGLAMHGCGEEAIQLFHEMEESGVRPDGITFISLLYACSHS 381
Query: 241 ASLDHGRQVHAQLVRCQFDVDVYVA--SVLITMYIKCGELVKG-KLIFDNFASKDIVMWN 297
++ G + +++ + + ++ + ++ +Y + L K + I + S + ++W
Sbjct: 382 GLVEEGCGLFSKM-KNLYGIEPAIEHYGCMVDLYGRAARLQKAYEFICEMPVSPNAIIWR 440
Query: 298 SIISGYAQYG 307
+++ + +G
Sbjct: 441 TLLGACSIHG 450
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 115/234 (49%), Gaps = 15/234 (6%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
M E NVV+W A++ G + A +F MP +N+ SW ML G+ + + ARR+F
Sbjct: 164 MSEPNVVTWNAVLTAAFRCGDVEGAQDVFGCMPVRNLTSWNGMLAGYAKAGELGLARRVF 223
Query: 61 DMMPEKDVVAQTNMVLGYCQDGRVDEG----REIFDEMPKKNVISWTTMISGYVNNNRID 116
MP +D V+ + M++G+ +G DE RE+ E + N +S T ++S +
Sbjct: 224 YEMPLRDEVSWSTMIVGFAHNGCFDEAFGFFRELLREEIRTNEVSLTGVLSACAQAGAFE 283
Query: 117 VARKLFEVMPEKNEVSW-----TAMLMGYTQCGRIQDAWELFKAMPM-KSVVASNSMILG 170
K+ EK + A++ Y++CG + A +F+ MP+ +S+V+ S+I G
Sbjct: 284 FG-KILHGFVEKAGFLYVGSVNNALIDTYSKCGNVAMARLVFQNMPVARSIVSWTSIIAG 342
Query: 171 LGQNGEVQKARVVFDQMREK----DDATWSGMIKVYERKGYELEVIDLFTLMQK 220
L +G ++A +F +M E D T+ ++ G E LF+ M+
Sbjct: 343 LAMHGCGEEAIQLFHEMEESGVRPDGITFISLLYACSHSGLVEEGCGLFSKMKN 396
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/239 (20%), Positives = 94/239 (39%), Gaps = 63/239 (26%)
Query: 233 VLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKD 292
L A+ L G Q+H+Q R FD ++V + LI+MY +CG+ + +FD + +
Sbjct: 109 ALKAVANSRHLRPGIQLHSQAFRHGFDAHIFVGTTLISMYAECGDSGSARRVFDEMSEPN 168
Query: 293 IVMWNSIIS-------------------------------GYAQYG-LG----------- 309
+V WN++++ GYA+ G LG
Sbjct: 169 VVTWNAVLTAAFRCGDVEGAQDVFGCMPVRNLTSWNGMLAGYAKAGELGLARRVFYEMPL 228
Query: 310 -------------------EKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREI 350
+++ F E+ + ++V+L GVLSAC+ G + G+ +
Sbjct: 229 RDEVSWSTMIVGFAHNGCFDEAFGFFRELLREEIRTNEVSLTGVLSACAQAGAFEFGKIL 288
Query: 351 FESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTH 409
++ + + + A ++D + G V A + + MP + W S++ H
Sbjct: 289 HGFVEKAGFLYVGSVNNA-LIDTYSKCGNVAMARLVFQNMPVARSIVSWTSIIAGLAMH 346
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 77/181 (42%), Gaps = 14/181 (7%)
Query: 231 ISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKL-----IF 285
+S+LS C+SL +Q+HAQ+ + D V L+ + C + L +F
Sbjct: 6 VSLLSKCSSLKPT---KQIHAQICKTGLHTDPLVFGKLL---LHCAITISDALHYALRLF 59
Query: 286 DNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVM-PDDVTLVGVLSACSYTGKV 344
+F + D M N++I + SL F ++ + PD T L A + + +
Sbjct: 60 HHFPNPDTFMHNTLIRSLSLSQTPLSSLHPFIQLRRQPTLSPDSFTFAFALKAVANSRHL 119
Query: 345 KEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLG 404
+ G ++ S ++ + ++ + G A ++ + M EP+ + W ++L
Sbjct: 120 RPGIQL-HSQAFRHGFDAHIFVGTTLISMYAECGDSGSARRVFDEMS-EPNVVTWNAVLT 177
Query: 405 A 405
A
Sbjct: 178 A 178
>gi|347954546|gb|AEP33773.1| organelle transcript processing 82, partial [Lobularia maritima]
Length = 695
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 241/649 (37%), Positives = 374/649 (57%), Gaps = 50/649 (7%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPE----KNVVSWTVMLGGFIRDSRIDDA 56
+ E N++ W M RG+ A L+ M N ++ +L + +
Sbjct: 48 IQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREG 107
Query: 57 RRL----FDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+++ + + D+ T+++ Y Q+GR+++ R++FD+ ++V+S+T +I+GY +
Sbjct: 108 QQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASK 167
Query: 113 NRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAM----------PMKSVV 162
I A+K+F+ +P K+ VSW AM+ GY + G ++A ELFK M M SVV
Sbjct: 168 GYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVV 227
Query: 163 A----SNSMILG-----------LGQN--------------GEVQKARVVFDQMREKDDA 193
+ S S+ LG G N GEV+ A +F+ + KD
Sbjct: 228 SACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVI 287
Query: 194 TWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQL 253
+W+ +I Y E + LF M + G N +++S+L CA L +++ GR +H +
Sbjct: 288 SWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYI 347
Query: 254 VRCQFDVDVYVA--SVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEK 311
+ V + + LI MY KCG++ + +FD+ ++ + WN++I G+A +G
Sbjct: 348 NKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANA 407
Query: 312 SLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMV 371
+ +F M + + PDD+T VG+LSACS++G + GR IF SMK Y + PK EHY CM+
Sbjct: 408 AFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHYGCMI 467
Query: 372 DLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAG 431
DLLG +G ++A ++I M EPD +IW SLL AC+ H ++L E A+ L+++EPKN G
Sbjct: 468 DLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVELGESYAQNLIKIEPKNPG 527
Query: 432 PYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHP 491
Y+LLSNIYA+ GR+++VA++R + + + K PGCS IE++ VH F D HP +
Sbjct: 528 SYVLLSNIYATAGRWNEVAKIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKF-HPRNR 586
Query: 492 MIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPI 551
I MLE++ LL EAG+ PD+S VL +++EE K +LR+HSEKLA+A+GL+ G +
Sbjct: 587 EIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKL 646
Query: 552 RVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
++KNLRVC +CH A KLISK+ REII RD RFHHF+DG+CSC DYW
Sbjct: 647 TIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 695
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 132/261 (50%), Gaps = 34/261 (13%)
Query: 183 VFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLAS 242
VF+ ++E + W+ M + + + + L+ M G+ N + +L CA +
Sbjct: 44 VFETIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKA 103
Query: 243 LDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDN--------------- 287
G+Q+H +++ +D+D+YV + LI+MY++ G L + +FD
Sbjct: 104 FREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITG 163
Query: 288 FAS----------------KDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTL 331
+AS KD+V WN++ISGYA+ G +++L++F EM + V PD+ T+
Sbjct: 164 YASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTM 223
Query: 332 VGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMP 391
V V+SAC+ + ++ GR++ S + + ++DL + G+VE A L E +
Sbjct: 224 VSVVSACAQSASIELGRQV-HSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLS 282
Query: 392 FEPDAIIWGSLLGACRTHMKL 412
++ D I W +L+G THM L
Sbjct: 283 YK-DVISWNTLIGG-YTHMNL 301
>gi|359486044|ref|XP_002269662.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Vitis vinifera]
Length = 689
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 206/465 (44%), Positives = 307/465 (66%), Gaps = 5/465 (1%)
Query: 140 YTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMI 199
Y +CG I DA +LF M ++ + + N++I G + GE+ A +F++M ++ +W+ MI
Sbjct: 226 YVKCGVIGDARKLFDKMIVRDMASWNALIAGYMKEGEIGVAEDLFERMEHRNIVSWTAMI 285
Query: 200 KVYERKGYELEVIDLFTLMQKEG--VRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQ 257
Y + G+ + + LF M ++G ++ N+ +++SVL CA A+L+ GR++H
Sbjct: 286 SGYTQNGFAEQALGLFDEMLQDGSEMKPNWVTIVSVLPACAQSAALERGRRIHDFANGIG 345
Query: 258 FDVDVYVASVLITMYIKCGELVKGKLIFDNFA--SKDIVMWNSIISGYAQYGLGEKSLKV 315
++ V + L MY KC LV+ + FD A K+++ WN++I+ YA +G G +++ +
Sbjct: 346 LHLNSSVQTALAGMYAKCYSLVEARCCFDMIAQNGKNLIAWNTMITAYASHGCGVEAVSI 405
Query: 316 FHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLG 375
F M +GV PD VT +G+LS CS++G + G F M + + VEP+ EHYAC+VDLLG
Sbjct: 406 FENMLRAGVQPDAVTFMGLLSGCSHSGLIDAGLNHFNDMGTIHSVEPRVEHYACVVDLLG 465
Query: 376 RAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYIL 435
RAG++ +A +LI MP + +WG+LL ACR+H L++AE+AA++L LEP N+G Y+L
Sbjct: 466 RAGRLVEAKELISQMPMQAGPSVWGALLAACRSHRNLEIAELAARRLFVLEPDNSGNYVL 525
Query: 436 LSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMR 495
LSN+YA G + +V +LR ++ + + K PGCSWIE+ K H+F G D SHP+ I +
Sbjct: 526 LSNLYAEAGMWEEVKKLRALLKYQGMKKSPGCSWIEINGKSHLFMGAD-KSHPQAKEIYK 584
Query: 496 MLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMK 555
LE + ++ AGY PD+SFVLHD+ EEEK ++L HSEKLA+A+GL+ GV +RV K
Sbjct: 585 FLEALPEKIKMAGYIPDTSFVLHDISEEEKEYNLTTHSEKLAIAFGLLNTRPGVVLRVTK 644
Query: 556 NLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
NLR+CGDCH+A K ISK+ REII+RD NRFH FKDG CSC DYW
Sbjct: 645 NLRICGDCHAATKFISKIYEREIIVRDLNRFHCFKDGSCSCGDYW 689
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 102/225 (45%), Gaps = 43/225 (19%)
Query: 65 EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEV 124
E D +++ Y + G + + R++FD+M +++ SW +I+GY+ I VA LFE
Sbjct: 213 EGDFYVGASLIDMYVKCGVIGDARKLFDKMIVRDMASWNALIAGYMKEGEIGVAEDLFER 272
Query: 125 MPEKNEVSWTAMLMGYTQCGRIQDAWELFKAM------------PMKSVVASNSMI---- 168
M +N VSWTAM+ GYTQ G + A LF M + SV+ + +
Sbjct: 273 MEHRNIVSWTAMISGYTQNGFAEQALGLFDEMLQDGSEMKPNWVTIVSVLPACAQSAALE 332
Query: 169 -----------LGLGQNGEVQ--------------KARVVFDQMRE--KDDATWSGMIKV 201
+GL N VQ +AR FD + + K+ W+ MI
Sbjct: 333 RGRRIHDFANGIGLHLNSSVQTALAGMYAKCYSLVEARCCFDMIAQNGKNLIAWNTMITA 392
Query: 202 YERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHG 246
Y G +E + +F M + GV+ + + + +LS C+ +D G
Sbjct: 393 YASHGCGVEAVSIFENMLRAGVQPDAVTFMGLLSGCSHSGLIDAG 437
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 83/180 (46%), Gaps = 12/180 (6%)
Query: 4 RNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMM 63
R++ SW A++ GY++EG I A LF +M +N+VSWT M+ G+ ++ + A LFD M
Sbjct: 245 RDMASWNALIAGYMKEGEIGVAEDLFERMEHRNIVSWTAMISGYTQNGFAEQALGLFDEM 304
Query: 64 PEKDVVAQTN-----MVLGYC-QDGRVDEGREIFDEMP----KKNVISWTTMISGYVNNN 113
+ + N VL C Q ++ GR I D N T + Y
Sbjct: 305 LQDGSEMKPNWVTIVSVLPACAQSAALERGRRIHDFANGIGLHLNSSVQTALAGMYAKCY 364
Query: 114 RIDVARKLFEVMPE--KNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGL 171
+ AR F+++ + KN ++W M+ Y G +A +F+ M V +GL
Sbjct: 365 SLVEARCCFDMIAQNGKNLIAWNTMITAYASHGCGVEAVSIFENMLRAGVQPDAVTFMGL 424
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 103/235 (43%), Gaps = 21/235 (8%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPE------KNVVSWTVMLGGFIRDSRID 54
M RN+VSWTAM+ GY + G +A LF +M + N V+ +L + + ++
Sbjct: 273 MEHRNIVSWTAMISGYTQNGFAEQALGLFDEMLQDGSEMKPNWVTIVSVLPACAQSAALE 332
Query: 55 DARRLFDMMP----EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPK--KNVISWTTMISG 108
RR+ D + QT + Y + + E R FD + + KN+I+W TMI+
Sbjct: 333 RGRRIHDFANGIGLHLNSSVQTALAGMYAKCYSLVEARCCFDMIAQNGKNLIAWNTMITA 392
Query: 109 YVNNNRIDVARKLFEVM----PEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVAS 164
Y ++ A +FE M + + V++ +L G + G I F M V
Sbjct: 393 YASHGCGVEAVSIFENMLRAGVQPDAVTFMGLLSGCSHSGLIDAGLNHFNDMGTIHSVEP 452
Query: 165 N-----SMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDL 214
++ LG+ G + +A+ + QM + + G + R LE+ +L
Sbjct: 453 RVEHYACVVDLLGRAGRLVEAKELISQMPMQAGPSVWGALLAACRSHRNLEIAEL 507
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 94/202 (46%), Gaps = 8/202 (3%)
Query: 246 GRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQ 305
G+Q HAQ+V + ++A+ ++ MY G+L ++FD + +++NSII Y +
Sbjct: 96 GQQAHAQIVLHGLQPNAFLAAKMVAMYASSGDLDSAVVVFDRIDNPSSLLYNSIIRAYTR 155
Query: 306 YG---LGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEP 362
+G L+ + M G++ D+ TL VL +C+ +V GR + + +E
Sbjct: 156 HGXXXXXXXXLEAYARMHFLGLLGDNFTLPFVLKSCADLSRVCMGRCV-HGQGLRVGLEG 214
Query: 363 KTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKL 422
A ++D+ + G + DA KL + M D W +L+ +MK VA
Sbjct: 215 DFYVGASLIDMYVKCGVIGDARKLFDKMIVR-DMASWNALIAG---YMKEGEIGVAEDLF 270
Query: 423 LQLEPKNAGPYILLSNIYASQG 444
++E +N + + + Y G
Sbjct: 271 ERMEHRNIVSWTAMISGYTQNG 292
>gi|297728297|ref|NP_001176512.1| Os11g0433100 [Oryza sativa Japonica Group]
gi|62701919|gb|AAX92992.1| hypothetical protein LOC_Os11g24530 [Oryza sativa Japonica Group]
gi|77550326|gb|ABA93123.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|125534237|gb|EAY80785.1| hypothetical protein OsI_35965 [Oryza sativa Indica Group]
gi|125577016|gb|EAZ18238.1| hypothetical protein OsJ_33779 [Oryza sativa Japonica Group]
gi|255680048|dbj|BAH95240.1| Os11g0433100 [Oryza sativa Japonica Group]
Length = 622
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 211/509 (41%), Positives = 313/509 (61%), Gaps = 2/509 (0%)
Query: 4 RNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMM 63
RNVV+WTA++ GY + EA LF M E+NVVSW ML + R++DA LF+ M
Sbjct: 102 RNVVTWTALLSGYARARRVDEAEALFEGMAERNVVSWNTMLEAYTAVGRVEDASALFNRM 161
Query: 64 PEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFE 123
P +D + ++ G + G ++ R++F+ MP ++V+SWTTMISG N +D A LF+
Sbjct: 162 PVRDAGSWNILLCGLVRSGSLERARKMFERMPVRDVMSWTTMISGLARNGSVDDAWVLFD 221
Query: 124 VMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVV 183
MPE+N VSW AM+ GY + RI++A +LF MP++ V + N MI G QN +++ AR +
Sbjct: 222 AMPERNVVSWNAMISGYARNHRIEEALDLFTKMPIRDVASWNIMITGFIQNKDLKSARQL 281
Query: 184 FDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASL 243
FD+M +++ TW+ M+ Y + + LF M +G++ N + + L C++LA+L
Sbjct: 282 FDEMPKRNVITWTTMMNGYLQCMQSEMALKLFNCMLVQGIQPNQVTFLGSLDACSNLAAL 341
Query: 244 DHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGY 303
G+QVH + + D +V S L+ +Y KCGE+ + +FD KD++ WN II+ Y
Sbjct: 342 CEGQQVHQMICKTPSQFDTFVESTLMNLYAKCGEIRLARNVFDFSMEKDLISWNGIIAAY 401
Query: 304 AQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPK 363
A +G G +++ ++ M +G P+D T VG+LSACS+ G V EG +IFESM + +
Sbjct: 402 AHHGFGIEAMHLYKNMQENGYKPNDATYVGLLSACSHAGLVDEGLKIFESMVKDNSIVVR 461
Query: 364 TEHYACMVDLLGRAGQVEDAMKLIEAMPFEP-DAIIWGSLLGACRTHMKLDLAEVAAKKL 422
EHY C+VDL RAG++EDA +LI +P + +W +LLG C +H + ++AAK L
Sbjct: 462 DEHYTCLVDLCSRAGRLEDAKRLISWFKIKPTSSTVWSALLGGCNSHGNESIGDLAAKHL 521
Query: 423 LQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGR 482
L+ EP NAG Y LL NIYAS G++ + AE+R M R + K PGCSWIEV KVH+F R
Sbjct: 522 LEAEPDNAGTYTLLCNIYASAGKWKEAAEIRSEMNVRGLKKQPGCSWIEVANKVHVFVSR 581
Query: 483 DCVSHPEHPMIMRMLEKIGGLLREAGYCP 511
D SH E +I +L+ I ++R AG P
Sbjct: 582 D-KSHSESDLINDLLQDIHRIMRMAGTVP 609
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 116/359 (32%), Positives = 197/359 (54%), Gaps = 11/359 (3%)
Query: 52 RIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEM-PKKNVISWTTMISGYV 110
R+ DARRLFD MP++DVV+ T MV Y + G + E R +FD ++NV++WT ++SGY
Sbjct: 56 RVSDARRLFDGMPDRDVVSWTAMVAAYARRGMLQEARVLFDRPDARRNVVTWTALLSGYA 115
Query: 111 NNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILG 170
R+D A LFE M E+N VSW ML YT GR++DA LF MP++ + N ++ G
Sbjct: 116 RARRVDEAEALFEGMAERNVVSWNTMLEAYTAVGRVEDASALFNRMPVRDAGSWNILLCG 175
Query: 171 LGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSL 230
L ++G +++AR +F++M +D +W+ MI R G + LF M + V V++ ++
Sbjct: 176 LVRSGSLERARKMFERMPVRDVMSWTTMISGLARNGSVDDAWVLFDAMPERNV-VSWNAM 234
Query: 231 ISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFAS 290
IS + +H + L DV +++IT +I+ +L + +FD
Sbjct: 235 ISGY-------ARNHRIEEALDLFTKMPIRDVASWNIMITGFIQNKDLKSARQLFDEMPK 287
Query: 291 KDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREI 350
++++ W ++++GY Q E +LK+F+ M G+ P+ VT +G L ACS + EG+++
Sbjct: 288 RNVITWTTMMNGYLQCMQSEMALKLFNCMLVQGIQPNQVTFLGSLDACSNLAALCEGQQV 347
Query: 351 FESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTH 409
+ M K + T + +++L + G++ A + + E D I W ++ A H
Sbjct: 348 HQ-MICKTPSQFDTFVESTLMNLYAKCGEIRLARNVFD-FSMEKDLISWNGIIAAYAHH 404
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 120/408 (29%), Positives = 202/408 (49%), Gaps = 57/408 (13%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MP R+ SW ++ G V G + A +F +MP ++V+SWT M+ G R+ +DDA LF
Sbjct: 161 MPVRDAGSWNILLCGLVRSGSLERARKMFERMPVRDVMSWTTMISGLARNGSVDDAWVLF 220
Query: 61 DMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARK 120
D MPE++VV+ M+ GY ++ R++E ++F +MP ++V SW MI+G++ N + AR+
Sbjct: 221 DAMPERNVVSWNAMISGYARNHRIEEALDLFTKMPIRDVASWNIMITGFIQNKDLKSARQ 280
Query: 121 LFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSV------------VASNSMI 168
LF+ MP++N ++WT M+ GY QC + + A +LF M ++ + SN
Sbjct: 281 LFDEMPKRNVITWTTMMNGYLQCMQSEMALKLFNCMLVQGIQPNQVTFLGSLDACSNLAA 340
Query: 169 LGLGQN---------------------------GEVQKARVVFDQMREKDDATWSGMIKV 201
L GQ GE++ AR VFD EKD +W+G+I
Sbjct: 341 LCEGQQVHQMICKTPSQFDTFVESTLMNLYAKCGEIRLARNVFDFSMEKDLISWNGIIAA 400
Query: 202 YERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVD 261
Y G+ +E + L+ MQ+ G + N + + +LS C+ +D G ++ +V+ D
Sbjct: 401 YAHHGFGIEAMHLYKNMQENGYKPNDATYVGLLSACSHAGLVDEGLKIFESMVK---DNS 457
Query: 262 VYVA----SVLITMYIKCGELVKGKLIFDNFASKDI--VMWNSIISGYAQYG---LGEKS 312
+ V + L+ + + G L K + F K +W++++ G +G +G+ +
Sbjct: 458 IVVRDEHYTCLVDLCSRAGRLEDAKRLISWFKIKPTSSTVWSALLGGCNSHGNESIGDLA 517
Query: 313 LKVFHEMFSSGVMPDDV-TLVGVLSACSYTGKVKEGREIFESMKSKYL 359
K E PD+ T + + + GK KE EI M + L
Sbjct: 518 AKHLLE-----AEPDNAGTYTLLCNIYASAGKWKEAAEIRSEMNVRGL 560
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/300 (22%), Positives = 127/300 (42%), Gaps = 53/300 (17%)
Query: 164 SNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGV 223
SN + L G V AR +FD M ++D +W+ M+ Y R+G ++Q+ V
Sbjct: 44 SNWRVAELAAAGRVSDARRLFDGMPDRDVVSWTAMVAAYARRG----------MLQEARV 93
Query: 224 RVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKL 283
+ P D R +V + L++ Y + + + +
Sbjct: 94 LFDRP---------------DARR-------------NVVTWTALLSGYARARRVDEAEA 125
Query: 284 IFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGK 343
+F+ A +++V WN+++ Y G E + +F+ M ++ L G++ +G
Sbjct: 126 LFEGMAERNVVSWNTMLEAYTAVGRVEDASALFNRMPVRDAGSWNILLCGLVR----SGS 181
Query: 344 VKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
++ R++FE M + ++ + M+ L R G V+DA L +AMP E + + W +++
Sbjct: 182 LERARKMFERMPVRDVMS-----WTTMISGLARNGSVDDAWVLFDAMP-ERNVVSWNAMI 235
Query: 404 -GACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVI 462
G R H E A ++ ++ + ++ + +L M KRNVI
Sbjct: 236 SGYARNHR----IEEALDLFTKMPIRDVASWNIMITGFIQNKDLKSARQLFDEMPKRNVI 291
>gi|298204516|emb|CBI23791.3| unnamed protein product [Vitis vinifera]
Length = 615
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 206/465 (44%), Positives = 307/465 (66%), Gaps = 5/465 (1%)
Query: 140 YTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMI 199
Y +CG I DA +LF M ++ + + N++I G + GE+ A +F++M ++ +W+ MI
Sbjct: 152 YVKCGVIGDARKLFDKMIVRDMASWNALIAGYMKEGEIGVAEDLFERMEHRNIVSWTAMI 211
Query: 200 KVYERKGYELEVIDLFTLMQKEG--VRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQ 257
Y + G+ + + LF M ++G ++ N+ +++SVL CA A+L+ GR++H
Sbjct: 212 SGYTQNGFAEQALGLFDEMLQDGSEMKPNWVTIVSVLPACAQSAALERGRRIHDFANGIG 271
Query: 258 FDVDVYVASVLITMYIKCGELVKGKLIFDNFA--SKDIVMWNSIISGYAQYGLGEKSLKV 315
++ V + L MY KC LV+ + FD A K+++ WN++I+ YA +G G +++ +
Sbjct: 272 LHLNSSVQTALAGMYAKCYSLVEARCCFDMIAQNGKNLIAWNTMITAYASHGCGVEAVSI 331
Query: 316 FHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLG 375
F M +GV PD VT +G+LS CS++G + G F M + + VEP+ EHYAC+VDLLG
Sbjct: 332 FENMLRAGVQPDAVTFMGLLSGCSHSGLIDAGLNHFNDMGTIHSVEPRVEHYACVVDLLG 391
Query: 376 RAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYIL 435
RAG++ +A +LI MP + +WG+LL ACR+H L++AE+AA++L LEP N+G Y+L
Sbjct: 392 RAGRLVEAKELISQMPMQAGPSVWGALLAACRSHRNLEIAELAARRLFVLEPDNSGNYVL 451
Query: 436 LSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMR 495
LSN+YA G + +V +LR ++ + + K PGCSWIE+ K H+F G D SHP+ I +
Sbjct: 452 LSNLYAEAGMWEEVKKLRALLKYQGMKKSPGCSWIEINGKSHLFMGAD-KSHPQAKEIYK 510
Query: 496 MLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMK 555
LE + ++ AGY PD+SFVLHD+ EEEK ++L HSEKLA+A+GL+ GV +RV K
Sbjct: 511 FLEALPEKIKMAGYIPDTSFVLHDISEEEKEYNLTTHSEKLAIAFGLLNTRPGVVLRVTK 570
Query: 556 NLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
NLR+CGDCH+A K ISK+ REII+RD NRFH FKDG CSC DYW
Sbjct: 571 NLRICGDCHAATKFISKIYEREIIVRDLNRFHCFKDGSCSCGDYW 615
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 102/225 (45%), Gaps = 43/225 (19%)
Query: 65 EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEV 124
E D +++ Y + G + + R++FD+M +++ SW +I+GY+ I VA LFE
Sbjct: 139 EGDFYVGASLIDMYVKCGVIGDARKLFDKMIVRDMASWNALIAGYMKEGEIGVAEDLFER 198
Query: 125 MPEKNEVSWTAMLMGYTQCGRIQDAWELFKAM------------PMKSVVASNSMI---- 168
M +N VSWTAM+ GYTQ G + A LF M + SV+ + +
Sbjct: 199 MEHRNIVSWTAMISGYTQNGFAEQALGLFDEMLQDGSEMKPNWVTIVSVLPACAQSAALE 258
Query: 169 -----------LGLGQNGEVQ--------------KARVVFDQMRE--KDDATWSGMIKV 201
+GL N VQ +AR FD + + K+ W+ MI
Sbjct: 259 RGRRIHDFANGIGLHLNSSVQTALAGMYAKCYSLVEARCCFDMIAQNGKNLIAWNTMITA 318
Query: 202 YERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHG 246
Y G +E + +F M + GV+ + + + +LS C+ +D G
Sbjct: 319 YASHGCGVEAVSIFENMLRAGVQPDAVTFMGLLSGCSHSGLIDAG 363
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 110/263 (41%), Gaps = 52/263 (19%)
Query: 4 RNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMM 63
R++ SW A++ GY++EG I A LF +M +N+VSWT M+ G+ ++ + A LFD M
Sbjct: 171 RDMASWNALIAGYMKEGEIGVAEDLFERMEHRNIVSWTAMISGYTQNGFAEQALGLFDEM 230
Query: 64 PEKDVVAQTN-----MVLGYC-QDGRVDEGREI--------------------------- 90
+ + N VL C Q ++ GR I
Sbjct: 231 LQDGSEMKPNWVTIVSVLPACAQSAALERGRRIHDFANGIGLHLNSSVQTALAGMYAKCY 290
Query: 91 --------FDEMPK--KNVISWTTMISGYVNNNRIDVARKLFEVM----PEKNEVSWTAM 136
FD + + KN+I+W TMI+ Y ++ A +FE M + + V++ +
Sbjct: 291 SLVEARCCFDMIAQNGKNLIAWNTMITAYASHGCGVEAVSIFENMLRAGVQPDAVTFMGL 350
Query: 137 LMGYTQCGRIQDAWELFKAMPMKSVVASN-----SMILGLGQNGEVQKARVVFDQMREKD 191
L G + G I F M V ++ LG+ G + +A+ + QM +
Sbjct: 351 LSGCSHSGLIDAGLNHFNDMGTIHSVEPRVEHYACVVDLLGRAGRLVEAKELISQMPMQA 410
Query: 192 DATWSGMIKVYERKGYELEVIDL 214
+ G + R LE+ +L
Sbjct: 411 GPSVWGALLAACRSHRNLEIAEL 433
>gi|302800114|ref|XP_002981815.1| hypothetical protein SELMODRAFT_114918 [Selaginella moellendorffii]
gi|300150647|gb|EFJ17297.1| hypothetical protein SELMODRAFT_114918 [Selaginella moellendorffii]
Length = 637
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 232/620 (37%), Positives = 347/620 (55%), Gaps = 23/620 (3%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRL- 59
MP ++VSW A++ Y+ F M + + V + F+ S DAR +
Sbjct: 21 MPVADIVSWNALIAAYIGNRDFDRCWLFFRGMLLQGINPGEVGISIFL--SACTDAREIT 78
Query: 60 ---------FDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYV 110
E++ + QT +V Y + G + +F M ++V++W+ M++ Y
Sbjct: 79 IGRSIQLAILGTGIEEESIVQTALVSMYGKLGHCTDAASVFLRMSHRDVVAWSAMVAAYA 138
Query: 111 NNNRIDVARKLFEVMP----EKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKS----VV 162
N A LF M N+V+ + L G ++ + + + + VV
Sbjct: 139 RNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLGDLRSGALMHQRVEAQGIQSGVV 198
Query: 163 ASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEG 222
+++ G+ G ++ A F Q+ EK+ WS + Y R + I + M EG
Sbjct: 199 VGTALVNLYGKCGRIEAAVEAFGQIVEKNVVAWSAISAAYARNDRNRDAIRVLHRMDLEG 258
Query: 223 VRVNFPSLISVLSVCASLASLDHGRQVH--AQLVRCQFDVDVYVASVLITMYIKCGELVK 280
+ N + +SVL CA++A+L GR++H Q++ + DVYV + L+ MY KCG L
Sbjct: 259 LVPNSTTFVSVLDACAAIAALKQGRRIHERTQVLGGGLESDVYVLTALVNMYSKCGNLAL 318
Query: 281 GKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSY 340
+FD A D+V+WNS+I+ AQ+G EK+L++F M G+ P +T VL ACS+
Sbjct: 319 AGDMFDKIAHLDLVLWNSLIATNAQHGQTEKALELFERMRLEGLQPTIITFTSVLFACSH 378
Query: 341 TGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWG 400
G + +GR+ F S + + P+ EH+ CMVDLLGRAG + D+ L+ MPFEP + W
Sbjct: 379 AGMLDQGRKHFVSFIGDHGIFPEAEHFGCMVDLLGRAGWIVDSEDLLLHMPFEPHPVAWM 438
Query: 401 SLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRN 460
+ LGACRT+ +D A AA+ L QL+P+ PY+LLSN+YA GR+ DVA +R+ M+
Sbjct: 439 AFLGACRTYRNMDRAIWAAENLFQLDPRKRAPYVLLSNMYAKAGRWSDVARMRQAMQLFM 498
Query: 461 VIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDV 520
+K G SWIEV+ +VH F D + HP I L+++ L++EAGY PD+ VLHDV
Sbjct: 499 TVKEAGRSWIEVKDRVHEFISGD-LDHPRIGEIHAELQRLTKLMKEAGYVPDTEMVLHDV 557
Query: 521 DEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIIL 580
+E K + YHSEKLA+A+ L+ PEG PIRV+KNLRVC DCH+A K ISK++ REI++
Sbjct: 558 KQEVKEIMVGYHSEKLAMAFALLTTPEGSPIRVVKNLRVCNDCHTASKFISKLVNREIVV 617
Query: 581 RDANRFHHFKDGLCSCRDYW 600
RD NRFH F++G CSC DYW
Sbjct: 618 RDCNRFHRFQNGACSCGDYW 637
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 98/354 (27%), Positives = 163/354 (46%), Gaps = 16/354 (4%)
Query: 74 MVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVM----PEKN 129
M+ Y Q G + R+ FDEMP +++SW +I+ Y+ N D F M
Sbjct: 1 MLSAYSQIGNIPAVRKAFDEMPVADIVSWNALIAAYIGNRDFDRCWLFFRGMLLQGINPG 60
Query: 130 EVSWTAMLMGYTQC-----GRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVF 184
EV + L T GR L + +S+V + +++ G+ G A VF
Sbjct: 61 EVGISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQT-ALVSMYGKLGHCTDAASVF 119
Query: 185 DQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLD 244
+M +D WS M+ Y R G+ E + LF M +GV N +L+S L CASL L
Sbjct: 120 LRMSHRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLGDLR 179
Query: 245 HGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYA 304
G +H ++ V V + L+ +Y KCG + F K++V W++I + YA
Sbjct: 180 SGALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAVEAFGQIVEKNVVAWSAISAAYA 239
Query: 305 QYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYL---VE 361
+ +++V H M G++P+ T V VL AC+ +K+GR I E +++ L +E
Sbjct: 240 RNDRNRDAIRVLHRMDLEGLVPNSTTFVSVLDACAAIAALKQGRRIHE--RTQVLGGGLE 297
Query: 362 PKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLA 415
+V++ + G + A + + + D ++W SL+ H + + A
Sbjct: 298 SDVYVLTALVNMYSKCGNLALAGDMFDKIA-HLDLVLWNSLIATNAQHGQTEKA 350
>gi|224068783|ref|XP_002302824.1| predicted protein [Populus trichocarpa]
gi|222844550|gb|EEE82097.1| predicted protein [Populus trichocarpa]
Length = 581
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 219/542 (40%), Positives = 323/542 (59%), Gaps = 8/542 (1%)
Query: 65 EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEV 124
+ V +++ Y + + + R++FDEMP KN +SW+ +I + ++R LF
Sbjct: 42 QSQVFISNSLITMYGKCDKYELSRQVFDEMPDKNAVSWSAIIGACLQDDRCKEGFSLFRQ 101
Query: 125 MPEKNEVSWTAMLMGYTQCGR----IQDAWELFKAMPMKSVVASNSMILGL-GQNGEVQK 179
M + ++ C R D + + + + S G+ + G V+
Sbjct: 102 MLSEGSRPSRGAILNAMACVRSHEEADDVYRVVVENGLDFDQSVQSAAAGMFARCGRVEV 161
Query: 180 ARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCAS 239
AR +FD + KD TW+ I+ Y + LE + L M +G+ + +L+ V+ C++
Sbjct: 162 ARKLFDGIMSKDLVTWATTIEAYVKADMPLEALGLLKQMMLQGIFPDAITLLGVIRACST 221
Query: 240 LASLDHGRQVHAQLVRCQF-DVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNS 298
LAS VH + F + + V + LI +Y+KCG L + +FD ++I+ W++
Sbjct: 222 LASFQLAHIVHGIITTGFFYNQLLAVETALIDLYVKCGSLTYARKVFDGMQERNIITWSA 281
Query: 299 IISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKY 358
+ISGY +G G ++L +F +M +S V PD +T V +LSACS++G V EG E F SM +
Sbjct: 282 MISGYGMHGWGREALNLFDQMKAS-VKPDHITFVSILSACSHSGLVAEGWECFNSMARDF 340
Query: 359 LVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVA 418
V P+ EHYACMVD+LGRAG++++A IE MP P+A +WG+LLGACR H+ +DLAE+
Sbjct: 341 GVTPRPEHYACMVDILGRAGKLDEACDFIERMPVRPNAAVWGALLGACRIHLNVDLAEMV 400
Query: 419 AKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHM 478
A+ L L+P NAG Y++L NIY G+ + +R M+ R V K G S IE++ K++
Sbjct: 401 ARALFDLDPHNAGRYVILYNIYTLTGKRKEADSIRTLMKNRGVKKIAGYSVIEIKNKLYA 460
Query: 479 FTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAV 538
F D SHP+ +I LE++ +R+ GY PD +FVLHDVDEE K L HSEKLA+
Sbjct: 461 FVAGD-RSHPQTDLIYSELERLMDRIRQEGYTPDINFVLHDVDEETKESMLYLHSEKLAI 519
Query: 539 AYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRD 598
+GL+ L G IR+ KNLRVCGDCH+A K ISKV GREI++RDA+RFHHFK+G CSCRD
Sbjct: 520 VFGLLNLGPGSVIRIRKNLRVCGDCHTATKFISKVTGREIVVRDAHRFHHFKNGACSCRD 579
Query: 599 YW 600
YW
Sbjct: 580 YW 581
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 124/269 (46%), Gaps = 15/269 (5%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM-PEKNVVSWTVMLGGFIRDSRIDDARRL 59
MP++N VSW+A++ +++ E +LF QM E + S +L ++A +
Sbjct: 71 MPDKNAVSWSAIIGACLQDDRCKEGFSLFRQMLSEGSRPSRGAILNAMACVRSHEEADDV 130
Query: 60 FDMMPEK----DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRI 115
+ ++ E D Q+ + + GRV+ R++FD + K++++W T I YV +
Sbjct: 131 YRVVVENGLDFDQSVQSAAAGMFARCGRVEVARKLFDGIMSKDLVTWATTIEAYVKADMP 190
Query: 116 DVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWEL--------FKAMPMKSVVASNSM 167
A L + M + L+G + +++L ++A +
Sbjct: 191 LEALGLLKQMMLQGIFPDAITLLGVIRACSTLASFQLAHIVHGIITTGFFYNQLLAVETA 250
Query: 168 ILGLG-QNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVN 226
++ L + G + AR VFD M+E++ TWS MI Y G+ E ++LF M K V+ +
Sbjct: 251 LIDLYVKCGSLTYARKVFDGMQERNIITWSAMISGYGMHGWGREALNLFDQM-KASVKPD 309
Query: 227 FPSLISVLSVCASLASLDHGRQVHAQLVR 255
+ +S+LS C+ + G + + R
Sbjct: 310 HITFVSILSACSHSGLVAEGWECFNSMAR 338
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 122/289 (42%), Gaps = 56/289 (19%)
Query: 218 MQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGE 277
M + G++ + + ++ C+ L + G ++H +V+ + V++++ LITMY KC +
Sbjct: 1 MLRLGIQPDNFTFPFIIKACSCLRHFEFGIRIHQDVVKFGYQSQVFISNSLITMYGKCDK 60
Query: 278 LVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMP----------- 326
+ +FD K+ V W++II Q ++ +F +M S G P
Sbjct: 61 YELSRQVFDEMPDKNAVSWSAIIGACLQDDRCKEGFSLFRQMLSEGSRPSRGAILNAMAC 120
Query: 327 -------DDVTLVGVLSACSY--------------TGKVKEGREIFESMKSKYLVEPKTE 365
DDV V V + + G+V+ R++F+ + SK LV
Sbjct: 121 VRSHEEADDVYRVVVENGLDFDQSVQSAAAGMFARCGRVEVARKLFDGIMSKDLVT---- 176
Query: 366 HYACMVDLLGRAGQVEDAMKLIEAMPFE---PDAIIWGSLLGACRTHMKLDLAEVAA--- 419
+A ++ +A +A+ L++ M + PDAI ++ AC T LA +
Sbjct: 177 -WATTIEAYVKADMPLEALGLLKQMMLQGIFPDAITLLGVIRACSTLASFQLAHIVHGII 235
Query: 420 ------KKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVI 462
+LL +E L ++Y G ++ M++RN+I
Sbjct: 236 TTGFFYNQLLAVETA-------LIDLYVKCGSLTYARKVFDGMQERNII 277
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 100/215 (46%), Gaps = 18/215 (8%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDM 62
+++V+W + YV+ M EA L QM + + + L G IR + +L +
Sbjct: 171 SKDLVTWATTIEAYVKADMPLEALGLLKQMMLQGIFPDAITLLGVIRACSTLASFQLAHI 230
Query: 63 MP---------EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNN 113
+ + + +T ++ Y + G + R++FD M ++N+I+W+ MISGY +
Sbjct: 231 VHGIITTGFFYNQLLAVETALIDLYVKCGSLTYARKVFDGMQERNIITWSAMISGYGMHG 290
Query: 114 RIDVARKLFEVMP---EKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASN----- 165
A LF+ M + + +++ ++L + G + + WE F +M V
Sbjct: 291 WGREALNLFDQMKASVKPDHITFVSILSACSHSGLVAEGWECFNSMARDFGVTPRPEHYA 350
Query: 166 SMILGLGQNGEVQKARVVFDQMREKDDAT-WSGMI 199
M+ LG+ G++ +A ++M + +A W ++
Sbjct: 351 CMVDILGRAGKLDEACDFIERMPVRPNAAVWGALL 385
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 104/234 (44%), Gaps = 33/234 (14%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMP---EKNVVSWTVMLGGFIRDSRIDDAR 57
M ERN+++W+AM+ GY G EA LF QM + + +++ +L + +
Sbjct: 271 MQERNIITWSAMISGYGMHGWGREALNLFDQMKASVKPDHITFVSILSACSHSGLVAEGW 330
Query: 58 RLFDMM-------PEKDVVAQTNMVLGYCQDGRVDEGREIFDEMP-KKNVISWTTMISGY 109
F+ M P + A +LG + G++DE + + MP + N W ++
Sbjct: 331 ECFNSMARDFGVTPRPEHYACMVDILG--RAGKLDEACDFIERMPVRPNAAVWGALLGAC 388
Query: 110 VNNNRID----VARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSV--VA 163
+ +D VAR LF++ P N + + YT G+ ++A + M + V +A
Sbjct: 389 RIHLNVDLAEMVARALFDLDPH-NAGRYVILYNIYTLTGKRKEADSIRTLMKNRGVKKIA 447
Query: 164 SNSMILGLGQNGEVQKARVVF---DQMREKDDATWSGMIKVYER---KGYELEV 211
S+I E++ F D+ + D +S + ++ +R +GY ++
Sbjct: 448 GYSVI-------EIKNKLYAFVAGDRSHPQTDLIYSELERLMDRIRQEGYTPDI 494
>gi|296090147|emb|CBI39966.3| unnamed protein product [Vitis vinifera]
Length = 726
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 233/655 (35%), Positives = 371/655 (56%), Gaps = 60/655 (9%)
Query: 2 PERNVVSWTAMVRGYVEEGMITEAGTLFWQM------PEK----NVVSWTVMLGGFIRDS 51
P NV W +++R G+ +EA +L+ + P+ +V++ L F
Sbjct: 76 PSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAK 135
Query: 52 RIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVN 111
I D R+ DM D+ ++ YC+ +D+ R++F+EMP ++V+SW ++ISGY
Sbjct: 136 SIHD--RVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNA 193
Query: 112 NNRIDVAR-------KLFEVMPEK---NEVSWTAMLMG---------------------- 139
N + A KLF M + + ++ T++L
Sbjct: 194 NGYWNEALEIYYQSIKLFMEMVNQFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGY 253
Query: 140 -------------YTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQ 186
Y +CG + + E+F M K V+ NSMI QNG++ + VF+
Sbjct: 254 ECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGKMGDSLKVFEN 313
Query: 187 MREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHG 246
M+ +D TW+ +I + + + M+ EGV + +++S+L VC+ LA+ G
Sbjct: 314 MKARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQG 373
Query: 247 RQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQY 306
+++H + + + DV V +VLI MY KCG L +F +KD+V W ++IS Y
Sbjct: 374 KEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMY 433
Query: 307 GLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEH 366
G G+K+++ F EM ++G++PD V V ++ ACS++G V+EG F MK Y +EP+ EH
Sbjct: 434 GEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEH 493
Query: 367 YACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLE 426
YAC+VDLL R+ ++ A I +MP +PD+ IWG+LL ACR ++AE ++++++L
Sbjct: 494 YACVVDLLSRSALLDKAEDFILSMPLKPDSSIWGALLSACRMSGDTEIAERVSERIIELN 553
Query: 427 PKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMF-TGRDCV 485
P + G Y+L+SNIYA+ G++ V +RK+++ R + K PGCSW+E++ KV++F TG
Sbjct: 554 PDDTGYYVLVSNIYAALGKWDQVRSIRKSIKARGLKKDPGCSWMEIQNKVYVFGTGTKFF 613
Query: 486 SHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKL 545
E + ++L + GL+ + GY + FVLHD+DE+EK L HSE+LA+A+GL+
Sbjct: 614 EQFEE--VNKLLGMLAGLMAKEGYIANLQFVLHDIDEDEKRDILCGHSERLAIAFGLLNT 671
Query: 546 PEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
G P++VMKNLRVC DCH+ K ISK++ RE+++RDANRFH FKDG CSC DYW
Sbjct: 672 KPGTPLQVMKNLRVCEDCHTVTKYISKIVQRELLVRDANRFHVFKDGACSCGDYW 726
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 82/417 (19%), Positives = 176/417 (42%), Gaps = 62/417 (14%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM------------PEKNVVSWTVMLGGFI 48
MP R+VVSW +++ GY G EA +++Q P+ ++ + G +
Sbjct: 176 MPLRDVVSWNSLISGYNANGYWNEALEIYYQSIKLFMEMVNQFKPDLLTITSILQACGHL 235
Query: 49 RDSRIDDARRLFDMMP----EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTT 104
D ++ + + D M E D A ++ Y + G + +E+F M K+ +SW +
Sbjct: 236 GD--LEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNS 293
Query: 105 MISGYVNNNRIDVARKLFEVMPEKNEVSWTAML----------MGYTQCGRIQ------D 148
MI+ Y+ N ++ + K+FE M ++ ++W ++ +G R++ D
Sbjct: 294 MINVYIQNGKMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPD 353
Query: 149 AWELFKAMPMKSVVAS-----------------------NSMILGLGQNGEVQKARVVFD 185
+ +P+ S++A+ N +I + G ++ + VF
Sbjct: 354 MATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFK 413
Query: 186 QMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDH 245
M+ KD TW+ +I G + + F M+ G+ + + ++++ C+ ++
Sbjct: 414 LMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSGLVEE 473
Query: 246 GRQVHAQLVR-CQFDVDVYVASVLITMYIKCGELVKGK-LIFDNFASKDIVMWNSIISGY 303
G ++ + + + + + ++ + + L K + I D +W +++S
Sbjct: 474 GLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSMPLKPDSSIWGALLSAC 533
Query: 304 AQYGLGEKSLKVFHEMFSSGVMPDDV-TLVGVLSACSYTGKVKEGREIFESMKSKYL 359
G E + +V + + PDD V V + + GK + R I +S+K++ L
Sbjct: 534 RMSGDTEIAERVSERIIE--LNPDDTGYYVLVSNIYAALGKWDQVRSIRKSIKARGL 588
>gi|449455158|ref|XP_004145320.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
gi|449470513|ref|XP_004152961.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
gi|449523079|ref|XP_004168552.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 733
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 243/656 (37%), Positives = 360/656 (54%), Gaps = 63/656 (9%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM-------PEKNVVSWTVMLGGFIRDSRI 53
+P+ N+ +W ++R Y ++ +F + P K + + ++ SR+
Sbjct: 85 IPQPNLYTWNTLIRAYASSSDPFQSFVIFLDLLDKCEDLPNKFTFPFVIKAASELKASRV 144
Query: 54 DDA------RRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMIS 107
A + F M D+ ++V Y G + +F + K+V+SW +MIS
Sbjct: 145 GTAVHGMAIKLSFGM----DLYILNSLVRFYGACGDLSMAERLFKGISCKDVVSWNSMIS 200
Query: 108 GYVNNNRIDVARKLF------EVMPEKNEVS------------------W---------- 133
+ N + A +LF VMP N V+ W
Sbjct: 201 AFAQGNCPEDALELFLKMERENVMP--NSVTMVGVLSACAKKLDLEFGRWVCSYIERKGI 258
Query: 134 -------TAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQ 186
AML YT+CG + DA +LF MP + V + M+ G + G+ AR+VF+
Sbjct: 259 KVDLTLCNAMLDMYTKCGSVDDAQKLFDEMPERDVFSWTIMLDGYAKMGDYDAARLVFNA 318
Query: 187 MREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGV-RVNFPSLISVLSVCASLASLDH 245
M K+ A W+ +I YE+ G E + +F +Q + + + +L+S LS CA L ++D
Sbjct: 319 MPVKEIAAWNVLISAYEQNGKPKEALAIFNELQLSKIAKPDEVTLVSTLSACAQLGAIDL 378
Query: 246 GRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQ 305
G +H + R ++ ++ S L+ MY KCG L K +F + +D+ +W+++I+G
Sbjct: 379 GGWIHVYIKREGIVLNCHLISSLVDMYAKCGSLEKALEVFYSVEERDVYVWSAMIAGLGM 438
Query: 306 YGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTE 365
+G G+ ++ +F EM + V P+ VT VL ACS+ G V EGR F M+ Y V P+ +
Sbjct: 439 HGRGKAAIDLFFEMQEAKVKPNSVTFTNVLCACSHAGLVDEGRVFFHEMEPVYGVVPEMK 498
Query: 366 HYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQL 425
HYACMVD+LGRAG +E+AM+LI M P A +WG+LLGAC HM ++L E+A+ +LL+L
Sbjct: 499 HYACMVDILGRAGFLEEAMELINEMSTTPSASVWGALLGACSLHMNVELGELASDQLLKL 558
Query: 426 EPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCV 485
EP+N G +LLSNIYA GR+ V+ELRK MR + K PGCS IE VH F D
Sbjct: 559 EPRNHGAIVLLSNIYAKTGRWEKVSELRKLMRDTELKKEPGCSSIEANGNVHEFLVGD-N 617
Query: 486 SHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEE-KVHSLRYHSEKLAVAYGLVK 544
+HP I LE+I L+ GY P+ S +L ++E++ K +L HSEKLA+A+GLV
Sbjct: 618 THPLSSNIYSKLEEIATKLKSVGYEPNKSHLLQLIEEDDLKEQALSLHSEKLAIAFGLVT 677
Query: 545 LPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
L PIRV+KNLR+CGDCH+ KL+S+V R+I+LRD RFHHF+DG CSC DYW
Sbjct: 678 LAPSQPIRVVKNLRICGDCHAFAKLVSRVYDRDILLRDRYRFHHFRDGHCSCMDYW 733
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 92/371 (24%), Positives = 168/371 (45%), Gaps = 51/371 (13%)
Query: 84 VDEGREIFDEMPKKNVISWTTMISGYVNNNR--------IDVARKLFEVMPEKNEVSWTA 135
+D R +FD++P+ N+ +W T+I Y +++ +D+ K E +P K +
Sbjct: 75 LDYARNLFDQIPQPNLYTWNTLIRAYASSSDPFQSFVIFLDLLDKC-EDLPNKFTFPFVI 133
Query: 136 MLMGYTQCGRIQDAWELFKAMPMK-----SVVASNSMILGLGQNGEVQKARVVFDQMREK 190
+ R+ A M +K + NS++ G G++ A +F + K
Sbjct: 134 KAASELKASRVGTA---VHGMAIKLSFGMDLYILNSLVRFYGACGDLSMAERLFKGISCK 190
Query: 191 DDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVH 250
D +W+ MI + + + ++LF M++E V N +++ VLS CA L+ GR V
Sbjct: 191 DVVSWNSMISAFAQGNCPEDALELFLKMERENVMPNSVTMVGVLSACAKKLDLEFGRWVC 250
Query: 251 AQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKD------------------ 292
+ + R VD+ + + ++ MY KCG + + +FD +D
Sbjct: 251 SYIERKGIKVDLTLCNAMLDMYTKCGSVDDAQKLFDEMPERDVFSWTIMLDGYAKMGDYD 310
Query: 293 -------------IVMWNSIISGYAQYGLGEKSLKVFHEM-FSSGVMPDDVTLVGVLSAC 338
I WN +IS Y Q G +++L +F+E+ S PD+VTLV LSAC
Sbjct: 311 AARLVFNAMPVKEIAAWNVLISAYEQNGKPKEALAIFNELQLSKIAKPDEVTLVSTLSAC 370
Query: 339 SYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAII 398
+ G + G I +K + +V + +VD+ + G +E A+++ ++ E D +
Sbjct: 371 AQLGAIDLGGWIHVYIKREGIV-LNCHLISSLVDMYAKCGSLEKALEVFYSVE-ERDVYV 428
Query: 399 WGSLLGACRTH 409
W +++ H
Sbjct: 429 WSAMIAGLGMH 439
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 86/206 (41%), Gaps = 11/206 (5%)
Query: 230 LISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYI--KCGELVKGKLIFDN 287
++S + C+S L ++VHA+++R D + AS L T L + +FD
Sbjct: 28 ILSTIDKCSSSKQL---KEVHARMLRTGLFFDPFSASKLFTASALSSFSTLDYARNLFDQ 84
Query: 288 FASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGV-MPDDVTLVGVLSACSYTGKVKE 346
++ WN++I YA +S +F ++ +P+ T V+ A S +
Sbjct: 85 IPQPNLYTWNTLIRAYASSSDPFQSFVIFLDLLDKCEDLPNKFTFPFVIKAASELKASRV 144
Query: 347 GREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGAC 406
G + M K +V G G + A +L + + + D + W S++ A
Sbjct: 145 GTAV-HGMAIKLSFGMDLYILNSLVRFYGACGDLSMAERLFKGISCK-DVVSWNSMISA- 201
Query: 407 RTHMKLDLAEVAAKKLLQLEPKNAGP 432
+ + E A + L++E +N P
Sbjct: 202 --FAQGNCPEDALELFLKMERENVMP 225
>gi|224107052|ref|XP_002333576.1| predicted protein [Populus trichocarpa]
gi|222837227|gb|EEE75606.1| predicted protein [Populus trichocarpa]
Length = 781
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 240/651 (36%), Positives = 371/651 (56%), Gaps = 53/651 (8%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
+ + V ++ Y + G I A ++F M +K+ VSW M+ G ++ +DA + +
Sbjct: 133 LNDAKVAVGNGLINMYAKCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSY 192
Query: 61 DMMPEKDVVAQTNMV---LGYCQD-GRVDEGREIFDEMPK----KNVISWTTMISGYVNN 112
+ M + ++ + L C G + G++ E K +V T+++ Y
Sbjct: 193 NSMRKTGLMPSNFALISALSSCASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLALYAET 252
Query: 113 NRIDVARKLFEVMPEKNEVSWTAMLMGYTQCG-RIQDAWELFKAM-------------PM 158
+R+ +K+F M E+++VSW ++ G + +A E+F M +
Sbjct: 253 SRLAECQKVFSWMLERDQVSWNTVIGALADSGASVSEAIEVFLEMMRAGWSPNRVTFINL 312
Query: 159 KSVVAS--------------------------NSMILGLGQNGEVQKARVVFDQMREK-D 191
+ V+S N+++ G++GE++ +F +M E+ D
Sbjct: 313 LATVSSLSTSKLSHQIHALILKYNVKDDNAIENALLACYGKSGEMENCEEIFSRMSERRD 372
Query: 192 DATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHA 251
+ +W+ MI Y + +DL LM + G R++ + +VLS CA++A+L+ G +VHA
Sbjct: 373 EVSWNSMISGYIHNELLCKAMDLVWLMMQRGQRLDCFTFATVLSACATVATLECGMEVHA 432
Query: 252 QLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEK 311
+R + DV + S L+ MY KCG + F+ +++ WNS+ISGYA++G G+
Sbjct: 433 CAIRACLESDVVIGSALVDMYSKCGRIDYASRFFNLMPVRNLYSWNSMISGYARHGHGDN 492
Query: 312 SLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMV 371
+L++F M SG +PD +T VGVLSACS+ G V EG E F+SM Y + P+ EHY+CMV
Sbjct: 493 ALRLFTRMKLSGQLPDHITFVGVLSACSHIGLVDEGFEYFKSMTEVYGLVPRVEHYSCMV 552
Query: 372 DLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGAC--RTHMKLDLAEVAAKKLLQLEPKN 429
DLLGRAG+++ I MP +P+ +IW ++LGAC K +L AA+ L ++P+N
Sbjct: 553 DLLGRAGELDKIENFINKMPIKPNILIWRTVLGACCRGNGRKTELGRRAAEMLFNMDPQN 612
Query: 430 AGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPE 489
A Y+LLSN+YAS G++ D+A R+ MR+ V K GCSW+ ++ VH+F D SHPE
Sbjct: 613 AVNYVLLSNMYASGGKWEDMARTRRAMREAAVKKEAGCSWVTMKDGVHVFVAGD-NSHPE 671
Query: 490 HPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGV 549
+I L+++ +R+AGY P F L+D++ E K L YHSEKLAVA+ L + G+
Sbjct: 672 KGLIYAKLKELDKKIRDAGYVPQIKFALYDLEPENKEELLSYHSEKLAVAFVLTR-NSGL 730
Query: 550 PIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
PIR+MKNLRVCGDCHSA K ISKV+ R I+LRD+NRFHHF+DG CSCRDYW
Sbjct: 731 PIRIMKNLRVCGDCHSAFKYISKVVDRSIVLRDSNRFHHFEDGKCSCRDYW 781
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 89/343 (25%), Positives = 158/343 (46%), Gaps = 43/343 (12%)
Query: 103 TTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKS-- 160
T+I+ YV ARKLF+ MP++N V+W ++ GYTQ G +DA + K M +
Sbjct: 39 NTLINVYVRIGDCVSARKLFDEMPDRNGVTWACLISGYTQNGMPEDACGVLKEMIFEGFL 98
Query: 161 ---------------------------------------VVASNSMILGLGQNGEVQKAR 181
V N +I + G++ AR
Sbjct: 99 PNRFAFGSAIRACQESMLWRRKGRQVHGYAIRTGLNDAKVAVGNGLINMYAKCGDIDHAR 158
Query: 182 VVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLA 241
VF M +KD +W+ MI ++ + + + M+K G+ + +LIS LS CASL
Sbjct: 159 SVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKTGLMPSNFALISALSSCASLG 218
Query: 242 SLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIIS 301
+ G+Q H + ++ D+DV V++ L+ +Y + L + + +F +D V WN++I
Sbjct: 219 CILLGQQTHGEGIKLGLDMDVSVSNTLLALYAETSRLAECQKVFSWMLERDQVSWNTVIG 278
Query: 302 GYAQYGLG-EKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLV 360
A G ++++VF EM +G P+ VT + +L+ S K +I ++ KY V
Sbjct: 279 ALADSGASVSEAIEVFLEMMRAGWSPNRVTFINLLATVSSLSTSKLSHQI-HALILKYNV 337
Query: 361 EPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
+ ++ G++G++E+ ++ M D + W S++
Sbjct: 338 KDDNAIENALLACYGKSGEMENCEEIFSRMSERRDEVSWNSMI 380
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 105/435 (24%), Positives = 190/435 (43%), Gaps = 22/435 (5%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFI----------RD 50
MP+RN V+W ++ GY + GM +A + +M + + G I R
Sbjct: 61 MPDRNGVTWACLISGYTQNGMPEDACGVLKEMIFEGFLPNRFAFGSAIRACQESMLWRRK 120
Query: 51 SRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYV 110
R + + + V ++ Y + G +D R +F M K+ +SW +MI+G
Sbjct: 121 GRQVHGYAIRTGLNDAKVAVGNGLINMYAKCGDIDHARSVFGLMVDKDSVSWNSMITGLD 180
Query: 111 NNNRIDVARKLFEVMPEKNEV-SWTAMLMGYTQCGRI-------QDAWELFKAMPMKSVV 162
N + A K + M + + S A++ + C + Q E K V
Sbjct: 181 QNKCFEDAVKSYNSMRKTGLMPSNFALISALSSCASLGCILLGQQTHGEGIKLGLDMDVS 240
Query: 163 ASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYEL-EVIDLFTLMQKE 221
SN+++ + + + + VF M E+D +W+ +I G + E I++F M +
Sbjct: 241 VSNTLLALYAETSRLAECQKVFSWMLERDQVSWNTVIGALADSGASVSEAIEVFLEMMRA 300
Query: 222 GVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKG 281
G N + I++L+ +SL++ Q+HA +++ D + + L+ Y K GE+
Sbjct: 301 GWSPNRVTFINLLATVSSLSTSKLSHQIHALILKYNVKDDNAIENALLACYGKSGEMENC 360
Query: 282 KLIFDNFAS-KDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSY 340
+ IF + +D V WNS+ISGY L K++ + M G D T VLSAC+
Sbjct: 361 EEIFSRMSERRDEVSWNSMISGYIHNELLCKAMDLVWLMMQRGQRLDCFTFATVLSACAT 420
Query: 341 TGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWG 400
++ G E+ + + +E + +VD+ + G+++ A + MP + W
Sbjct: 421 VATLECGMEV-HACAIRACLESDVVIGSALVDMYSKCGRIDYASRFFNLMPVR-NLYSWN 478
Query: 401 SLLGACRTHMKLDLA 415
S++ H D A
Sbjct: 479 SMISGYARHGHGDNA 493
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 77/155 (49%), Gaps = 2/155 (1%)
Query: 250 HAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLG 309
H +++ FD D+++ + LI +Y++ G+ V + +FD ++ V W +ISGY Q G+
Sbjct: 23 HLNVLKHGFDSDLFLCNTLINVYVRIGDCVSARKLFDEMPDRNGVTWACLISGYTQNGMP 82
Query: 310 EKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGK-VKEGREIFESMKSKYLVEPKTEHYA 368
E + V EM G +P+ + AC + ++GR++ L + K
Sbjct: 83 EDACGVLKEMIFEGFLPNRFAFGSAIRACQESMLWRRKGRQVHGYAIRTGLNDAKVAVGN 142
Query: 369 CMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
++++ + G ++ A + M + D++ W S++
Sbjct: 143 GLINMYAKCGDIDHARSVFGLM-VDKDSVSWNSMI 176
>gi|449485565|ref|XP_004157209.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 953
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 228/610 (37%), Positives = 349/610 (57%), Gaps = 40/610 (6%)
Query: 22 ITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQD 81
+T+A +F + + VSW +L G+I +++A+ ++ MPE+ ++A +M++ +
Sbjct: 264 MTDACRVFNESSVLDSVSWNSILAGYIEIGNVEEAKHIYHQMPERSIIASNSMIVLFGMR 323
Query: 82 GRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLF------------------- 122
G V E ++FDEM +K++++W+ +I+ + N + A + F
Sbjct: 324 GLVVEACKLFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSAL 383
Query: 123 --------------------EVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVV 162
++ E A++ Y++CG I A +LF + ++
Sbjct: 384 SACANLLVVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLI 443
Query: 163 ASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEG 222
+ NSMI G + V A+ +FD M EKD +WS MI Y + E + LF MQ G
Sbjct: 444 SWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSG 503
Query: 223 VRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGK 282
+ + +L+SV+S CA LA+L+ G+ VHA + R ++V + + LI MY+KCG +
Sbjct: 504 FKPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETAL 563
Query: 283 LIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTG 342
+F K I WN++I G A GL E SL +F M V P+++T +GVL AC + G
Sbjct: 564 EVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMG 623
Query: 343 KVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSL 402
V EG+ F SM + ++P +HY CMVDLLGRAG++++A +L+ MP PD WG+L
Sbjct: 624 LVDEGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGAL 683
Query: 403 LGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVI 462
LGAC+ H ++ +KL++L+P + G ++LLSNIYAS+G++ DV E+R M K V+
Sbjct: 684 LGACKKHGDSEMGRRVGRKLIELQPDHDGFHVLLSNIYASKGKWDDVLEIRGMMTKHRVL 743
Query: 463 KPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDE 522
K PGCS IE +H F D +HP+ I ML ++ L+ GY PD + VL DVDE
Sbjct: 744 KIPGCSMIEANGVIHEFLAGD-KTHPDMDAIEDMLVEMAMKLKLEGYTPDINEVLLDVDE 802
Query: 523 EEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRD 582
EEK +L HSEKLA+A+GL+ + PIR+MKNLR+C DCH+A KLISK R+I++RD
Sbjct: 803 EEKESTLFRHSEKLAIAFGLINISPPTPIRIMKNLRICNDCHTAAKLISKAFCRKIVVRD 862
Query: 583 ANRFHHFKDG 592
+RFHHF+ G
Sbjct: 863 RHRFHHFEQG 872
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 113/375 (30%), Positives = 183/375 (48%), Gaps = 67/375 (17%)
Query: 103 TTMISGY-VNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSV 161
T+I+ + V +N D R +F + VSW ++L GY + G +++A ++ MP +S+
Sbjct: 252 NTLINCFSVCSNMTDACR-VFNESSVLDSVSWNSILAGYIEIGNVEEAKHIYHQMPERSI 310
Query: 162 VASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKE 221
+ASNSMI+ G G V +A +FD+M EKD TWS +I +++ E I F M K
Sbjct: 311 IASNSMIVLFGMRGLVVEACKLFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFVGMHKI 370
Query: 222 GVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKG 281
GV V+ +S LS CA+L ++ G+ +H+ ++ + + + + LI MY KCG+++
Sbjct: 371 GVMVDEVVAVSALSACANLLVVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVA 430
Query: 282 KLIFDNFASKDIVMWNS-------------------------------IISGYAQYGLGE 310
+ +FD D++ WNS +ISGYAQ L +
Sbjct: 431 RKLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFD 490
Query: 311 KSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYL----------- 359
++L +F EM SG PD+ TLV V+SAC+ +++G+ + +K L
Sbjct: 491 ETLALFQEMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLI 550
Query: 360 --------VEPKTEHYACMVD---------LLGRA--GQVEDAMKLIEAMP---FEPDAI 397
VE E + M++ +LG A G VE ++ + M P+ I
Sbjct: 551 DMYMKCGCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEI 610
Query: 398 IWGSLLGACRTHMKL 412
+ +LGACR HM L
Sbjct: 611 TFMGVLGACR-HMGL 624
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/397 (23%), Positives = 175/397 (44%), Gaps = 84/397 (21%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MPER++++ +M+ + G++ EA LF +M EK++V+W+ ++ F ++ ++A R F
Sbjct: 305 MPERSIIASNSMIVLFGMRGLVVEACKLFDEMLEKDMVTWSALIACFQQNEMYEEAIRTF 364
Query: 61 DMMPE-----KDVVA----------------------------------QTNMVLGYCQD 81
M + +VVA Q ++ Y +
Sbjct: 365 VGMHKIGVMVDEVVAVSALSACANLLVVNMGKLIHSLSLKIGTESYINLQNALIYMYSKC 424
Query: 82 GRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYT 141
G + R++FDE ++ISW +MISGY+ N +D A+ +F+ MPEK+ VSW++M+ GY
Sbjct: 425 GDIMVARKLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYA 484
Query: 142 QCGRIQDAWELFKAMPMK----------SVVASNSMILGLGQN----------------- 174
Q + LF+ M M SV+++ + + L Q
Sbjct: 485 QNDLFDETLALFQEMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVI 544
Query: 175 ------------GEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEG 222
G V+ A VF M EK +TW+ +I G +D+F+ M+K
Sbjct: 545 LGTTLIDMYMKCGCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCH 604
Query: 223 VRVNFPSLISVLSVCASLASLDHGRQVHAQLV---RCQFDVDVYVASVLITMYIKCGELV 279
V N + + VL C + +D G+ ++ + Q +V Y ++ + + G+L
Sbjct: 605 VTPNEITFMGVLGACRHMGLVDEGQHHFYSMIHDHKIQPNVKHY--GCMVDLLGRAGKLQ 662
Query: 280 KGKLIFDNFA-SKDIVMWNSIISGYAQYGLGEKSLKV 315
+ + + + + D+ W +++ ++G E +V
Sbjct: 663 EAEELLNRMPMTPDVATWGALLGACKKHGDSEMGRRV 699
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 128/277 (46%), Gaps = 22/277 (7%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMP 64
+++SW +M+ GY++ ++ A +F MPEK+VVSW+ M+ G+ ++ D+ LF M
Sbjct: 441 DLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQ 500
Query: 65 ----EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKK----NVISWTTMISGYVNNNRID 116
+ D +++ + +++G+ + + + NVI TT+I Y+ ++
Sbjct: 501 MSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVE 560
Query: 117 VARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMI-------- 168
A ++F M EK +W A+++G G ++ + ++F M K V N +
Sbjct: 561 TALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMK-KCHVTPNEITFMGVLGAC 619
Query: 169 --LGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVN 226
+GL G+ ++ D + + + M+ + R G E +L M + +
Sbjct: 620 RHMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMP---MTPD 676
Query: 227 FPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVY 263
+ ++L C + GR+V +L+ Q D D +
Sbjct: 677 VATWGALLGACKKHGDSEMGRRVGRKLIELQPDHDGF 713
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 101/218 (46%), Gaps = 22/218 (10%)
Query: 226 NFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIF 285
+P LI C+ S +QVH +++ FD DVYV + LI + C + +F
Sbjct: 215 TYPLLIQA---CSIRRSEWEAKQVHNHVLKLGFDSDVYVRNTLINCFSVCSNMTDACRVF 271
Query: 286 DNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDD--VTLVGVLSACSYTGK 343
+ + D V WNSI++GY + G E++ ++H+M ++ + + L G+ G
Sbjct: 272 NESSVLDSVSWNSILAGYIEIGNVEEAKHIYHQMPERSIIASNSMIVLFGM------RGL 325
Query: 344 VKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMP---FEPDAIIWG 400
V E ++F+ M K +V ++ ++ + E+A++ M D ++
Sbjct: 326 VVEACKLFDEMLEKDMVT-----WSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAV 380
Query: 401 SLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSN 438
S L AC + +++ ++ L++ ++ YI L N
Sbjct: 381 SALSACANLLVVNMGKLIHSLSLKIGTES---YINLQN 415
>gi|125558027|gb|EAZ03563.1| hypothetical protein OsI_25699 [Oryza sativa Indica Group]
Length = 528
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 221/530 (41%), Positives = 330/530 (62%), Gaps = 18/530 (3%)
Query: 86 EGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSW---TAMLMGYTQ 142
+ R FDE+P N + T M SGYV NN + + +LF M + S A L+ ++
Sbjct: 2 DARRAFDEIPDPNPVIVTAMASGYVRNNLVYHSLELFRAMIASDSASVVDEAAALVAFSA 61
Query: 143 CGRIQDAWELFKAMPM-------KSVVASNSMILGLGQNG--EVQKARVVFDQMREKDDA 193
R+ D + ++ N+M+ + G +++ AR VFD M E+D
Sbjct: 62 SARVPDRGVTASLHALIAKIGFERNAGVVNTMLDSYAKGGSRDLEVARKVFDTM-ERDVV 120
Query: 194 TWSGMIKVYERKGYELEVIDLFTLMQK--EGVRVNFPSLISVLSVCASLASLDHGRQVHA 251
+W+ MI +Y + G E I L++ M G++ N +L +VL CA ++ G+ +H
Sbjct: 121 SWNSMIALYAQNGMSAEAIGLYSKMLNVGGGIKCNAVALSAVLLACAHAGAIQTGKHIHN 180
Query: 252 QLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEK 311
Q+VR + +VYV + ++ MY KCG + F K+I+ W+++I+GY +G G++
Sbjct: 181 QVVRMGLEENVYVGTSIVDMYSKCGRVEMASRAFRKIKEKNILSWSAMITGYGMHGRGQE 240
Query: 312 SLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMV 371
+L++F EM SG+ P+ +T + VL+ACS+ G + EGR + +MK ++ +E EHY CMV
Sbjct: 241 ALEIFTEMKRSGLRPNYITFISVLAACSHAGLLDEGRYWYNAMKQEFGIEAGVEHYGCMV 300
Query: 372 DLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAG 431
DLLGRAG +++A LI+ M +PDA IWG+LL ACR H ++LAE++ K+L +L+ N+G
Sbjct: 301 DLLGRAGCLDEAYSLIKEMKVKPDAAIWGALLSACRIHKNVELAEMSVKRLFELDASNSG 360
Query: 432 PYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHP 491
Y+LLSNIYA G + DV +R ++ R + KPPG S E++ K+++F D SHP+H
Sbjct: 361 YYVLLSNIYAEAGMWKDVERIRLLVKTRRIEKPPGYSSFELKGKIYLFYVGD-KSHPQHI 419
Query: 492 MIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVK-LPEGVP 550
I LEK+ ++EAGY P++ VLHD+DEEEK +LR HSEKLAVA+ L+ +P V
Sbjct: 420 EIYSYLEKLLERMQEAGYVPNTGSVLHDLDEEEKESALRIHSEKLAVAFALMNSVPRSV- 478
Query: 551 IRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
I ++KNLRVC DCH+A+K I+K+ REII+RD RFHHFKDGLCSCRDYW
Sbjct: 479 IHIIKNLRVCSDCHTAMKFITKITEREIIIRDLQRFHHFKDGLCSCRDYW 528
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 90/350 (25%), Positives = 161/350 (46%), Gaps = 30/350 (8%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM---PEKNVVSWTVMLGGFIRDSRIDD-- 55
+P+ N V TAM GYV ++ + LF M +VV L F +R+ D
Sbjct: 10 IPDPNPVIVTAMASGYVRNNLVYHSLELFRAMIASDSASVVDEAAALVAFSASARVPDRG 69
Query: 56 -ARRLFDMMP----EKDVVAQTNMVLGYCQDGRVD--EGREIFDEMPKKNVISWTTMISG 108
L ++ E++ M+ Y + G D R++FD M +++V+SW +MI+
Sbjct: 70 VTASLHALIAKIGFERNAGVVNTMLDSYAKGGSRDLEVARKVFDTM-ERDVVSWNSMIAL 128
Query: 109 YVNNNRIDVARKLFEVM------PEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPM---- 158
Y N A L+ M + N V+ +A+L+ G IQ + +
Sbjct: 129 YAQNGMSAEAIGLYSKMLNVGGGIKCNAVALSAVLLACAHAGAIQTGKHIHNQVVRMGLE 188
Query: 159 KSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLM 218
++V S++ + G V+ A F +++EK+ +WS MI Y G E +++FT M
Sbjct: 189 ENVYVGTSIVDMYSKCGRVEMASRAFRKIKEKNILSWSAMITGYGMHGRGQEALEIFTEM 248
Query: 219 QKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVA--SVLITMYIKCG 276
++ G+R N+ + ISVL+ C+ LD GR + + + +F ++ V ++ + + G
Sbjct: 249 KRSGLRPNYITFISVLAACSHAGLLDEGRYWYNAM-KQEFGIEAGVEHYGCMVDLLGRAG 307
Query: 277 ELVKG-KLIFDNFASKDIVMWNSIISG---YAQYGLGEKSLKVFHEMFSS 322
L + LI + D +W +++S + L E S+K E+ +S
Sbjct: 308 CLDEAYSLIKEMKVKPDAAIWGALLSACRIHKNVELAEMSVKRLFELDAS 357
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 116/251 (46%), Gaps = 21/251 (8%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQM------PEKNVVSWTVMLGGFIRDSRIDDA 56
ER+VVSW +M+ Y + GM EA L+ +M + N V+ + +L I
Sbjct: 116 ERDVVSWNSMIALYAQNGMSAEAIGLYSKMLNVGGGIKCNAVALSAVLLACAHAGAIQTG 175
Query: 57 RRLFD----MMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+ + + M E++V T++V Y + GRV+ F ++ +KN++SW+ MI+GY +
Sbjct: 176 KHIHNQVVRMGLEENVYVGTSIVDMYSKCGRVEMASRAFRKIKEKNILSWSAMITGYGMH 235
Query: 113 NRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAMPMK-----SVVA 163
R A ++F M N +++ ++L + G + + + AM + V
Sbjct: 236 GRGQEALEIFTEMKRSGLRPNYITFISVLAACSHAGLLDEGRYWYNAMKQEFGIEAGVEH 295
Query: 164 SNSMILGLGQNGEVQKARVVFDQMREKDDAT-WSGMIKVYE-RKGYELEVIDLFTLMQKE 221
M+ LG+ G + +A + +M+ K DA W ++ K EL + + L + +
Sbjct: 296 YGCMVDLLGRAGCLDEAYSLIKEMKVKPDAAIWGALLSACRIHKNVELAEMSVKRLFELD 355
Query: 222 GVRVNFPSLIS 232
+ L+S
Sbjct: 356 ASNSGYYVLLS 366
>gi|356510389|ref|XP_003523921.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 818
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 229/616 (37%), Positives = 351/616 (56%), Gaps = 19/616 (3%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFI------RDSRID 54
M +++VSWT +V GY + G A L QM E +V L + + RI
Sbjct: 206 MQHKDLVSWTTLVAGYAQNGHAKRALQLVLQMQEAGQKPDSVTLVSILPAVADMKALRIG 265
Query: 55 DARRLFDMMPE-KDVVAQTNMVLG-YCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+ + + +V TN +L Y + G R +F M K V+SW TMI G N
Sbjct: 266 RSIHGYAFRSGFESLVNVTNALLDMYFKCGSARIARLVFKGMRSKTVVSWNTMIDGCAQN 325
Query: 113 NRIDVARKLFEVMPEKNEVSWTAMLMGY----TQCGRIQDAW---ELFKAMPMKSVVAS- 164
+ A F M ++ EV +MG G ++ W +L + + S V+
Sbjct: 326 GESEEAFATFLKMLDEGEVPTRVTMMGVLLACANLGDLERGWFVHKLLDKLKLDSNVSVM 385
Query: 165 NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVR 224
NS+I + V A +F+ + EK + TW+ MI Y + G E ++LF +MQ +G++
Sbjct: 386 NSLISMYSKCKRVDIAASIFNNL-EKTNVTWNAMILGYAQNGCVKEALNLFCMMQSQGIK 444
Query: 225 VNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLI 284
++ +L+ V++ A + + +H VR D +V+V++ L+ MY KCG + + +
Sbjct: 445 LDCFTLVGVITALADFSVNRQAKWIHGLAVRACMDNNVFVSTALVDMYAKCGAIKTARKL 504
Query: 285 FDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKV 344
FD + ++ WN++I GY +G+G+++L +F+EM V P+D+T + V+SACS++G V
Sbjct: 505 FDMMQERHVITWNAMIDGYGTHGVGKETLDLFNEMQKGAVKPNDITFLSVISACSHSGFV 564
Query: 345 KEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLG 404
+EG +F+SM+ Y +EP +HY+ MVDLLGRAGQ++DA I+ MP +P + G++LG
Sbjct: 565 EEGLLLFKSMQEDYYLEPTMDHYSAMVDLLGRAGQLDDAWNFIQEMPIKPGISVLGAMLG 624
Query: 405 ACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKP 464
AC+ H ++L E AA+KL +L+P G ++LL+NIYAS + VA++R M + + K
Sbjct: 625 ACKIHKNVELGEKAAQKLFKLDPDEGGYHVLLANIYASNSMWDKVAKVRTAMEDKGLHKT 684
Query: 465 PGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEE 524
PGCSW+E+ ++H F +HPE I LE +G ++ AGY PD + HDV+E+
Sbjct: 685 PGCSWVELRNEIHTFYSGS-TNHPESKKIYAFLETLGDEIKAAGYVPDPDSI-HDVEEDV 742
Query: 525 KVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDAN 584
K L HSE+LA+A+GL+ G + + KNLRVCGDCH K IS V GREII+RD
Sbjct: 743 KKQLLSSHSERLAIAFGLLNTSPGTTLHIRKNLRVCGDCHDTTKYISLVTGREIIVRDLR 802
Query: 585 RFHHFKDGLCSCRDYW 600
RFHHFK+G CSC DYW
Sbjct: 803 RFHHFKNGSCSCGDYW 818
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 115/448 (25%), Positives = 201/448 (44%), Gaps = 52/448 (11%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMP----- 64
T ++ + + G +EA +F + K V + +ML G+ ++S + DA F M
Sbjct: 83 TKVISLFCKFGSNSEAARVFEHVELKLDVLYHIMLKGYAKNSSLGDALCFFLRMMCDEVR 142
Query: 65 ----------------------------------EKDVVAQTNMVLGYCQDGRVDEGREI 90
E ++ T ++ Y + ++D ++
Sbjct: 143 LVVGDYACLLQLCGENLDLKKGREIHGLIITNGFESNLFVMTAVMSLYAKCRQIDNAYKM 202
Query: 91 FDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNE----VSWTAML-----MGYT 141
F+ M K+++SWTT+++GY N A +L M E + V+ ++L M
Sbjct: 203 FERMQHKDLVSWTTLVAGYAQNGHAKRALQLVLQMQEAGQKPDSVTLVSILPAVADMKAL 262
Query: 142 QCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKV 201
+ GR + F++ V +N+++ + G + AR+VF MR K +W+ MI
Sbjct: 263 RIGRSIHGYA-FRSGFESLVNVTNALLDMYFKCGSARIARLVFKGMRSKTVVSWNTMIDG 321
Query: 202 YERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVD 261
+ G E F M EG +++ VL CA+L L+ G VH L + + D +
Sbjct: 322 CAQNGESEEAFATFLKMLDEGEVPTRVTMMGVLLACANLGDLERGWFVHKLLDKLKLDSN 381
Query: 262 VYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFS 321
V V + LI+MY KC + IF+N K V WN++I GYAQ G +++L +F M S
Sbjct: 382 VSVMNSLISMYSKCKRVDIAASIFNNL-EKTNVTWNAMILGYAQNGCVKEALNLFCMMQS 440
Query: 322 SGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVE 381
G+ D TLVGV++A + ++ + I + + ++ +VD+ + G ++
Sbjct: 441 QGIKLDCFTLVGVITALADFSVNRQAKWI-HGLAVRACMDNNVFVSTALVDMYAKCGAIK 499
Query: 382 DAMKLIEAMPFEPDAIIWGSLLGACRTH 409
A KL + M E I W +++ TH
Sbjct: 500 TARKLFDMMQ-ERHVITWNAMIDGYGTH 526
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 140/288 (48%), Gaps = 14/288 (4%)
Query: 71 QTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLF-EVMPEKN 129
QT ++ +C+ G E +F+ + K + + M+ GY N+ + A F +M ++
Sbjct: 82 QTKVISLFCKFGSNSEAARVFEHVELKLDVLYHIMLKGYAKNSSLGDALCFFLRMMCDEV 141
Query: 130 EVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASN---------SMILGL-GQNGEVQK 179
+ CG D L K + ++ +N + ++ L + ++
Sbjct: 142 RLVVGDYACLLQLCGENLD---LKKGREIHGLIITNGFESNLFVMTAVMSLYAKCRQIDN 198
Query: 180 ARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCAS 239
A +F++M+ KD +W+ ++ Y + G+ + L MQ+ G + + +L+S+L A
Sbjct: 199 AYKMFERMQHKDLVSWTTLVAGYAQNGHAKRALQLVLQMQEAGQKPDSVTLVSILPAVAD 258
Query: 240 LASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSI 299
+ +L GR +H R F+ V V + L+ MY KCG +L+F SK +V WN++
Sbjct: 259 MKALRIGRSIHGYAFRSGFESLVNVTNALLDMYFKCGSARIARLVFKGMRSKTVVSWNTM 318
Query: 300 ISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEG 347
I G AQ G E++ F +M G +P VT++GVL AC+ G ++ G
Sbjct: 319 IDGCAQNGESEEAFATFLKMLDEGEVPTRVTMMGVLLACANLGDLERG 366
>gi|15235472|ref|NP_195434.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75097747|sp|O23169.1|PP353_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g37170
gi|2464864|emb|CAB16758.1| putative protein [Arabidopsis thaliana]
gi|7270666|emb|CAB80383.1| putative protein [Arabidopsis thaliana]
gi|332661361|gb|AEE86761.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 691
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 220/573 (38%), Positives = 338/573 (58%), Gaps = 10/573 (1%)
Query: 37 VVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPK 96
+V W +L + + + DAR++FD MP +D+ + MV GY + G ++E R++FDEM +
Sbjct: 120 IVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTE 179
Query: 97 KNVISWTTMISGYVNNNRIDVARKLFEVM-------PEKNEVSWTAMLMGYTQCGR--IQ 147
K+ SWT M++GYV ++ + A L+ +M P VS +C R +
Sbjct: 180 KDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKE 239
Query: 148 DAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGY 207
+ +A V +S++ G+ G + +AR +FD++ EKD +W+ MI Y +
Sbjct: 240 IHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSR 299
Query: 208 ELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASV 267
E LF+ + R N + VL+ CA L + + G+QVH + R FD + +S
Sbjct: 300 WREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSS 359
Query: 268 LITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPD 327
L+ MY KCG + K + D D+V W S+I G AQ G +++LK F + SG PD
Sbjct: 360 LVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPD 419
Query: 328 DVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLI 387
VT V VLSAC++ G V++G E F S+ K+ + ++HY C+VDLL R+G+ E +I
Sbjct: 420 HVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVI 479
Query: 388 EAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFH 447
MP +P +W S+LG C T+ +DLAE AA++L ++EP+N Y+ ++NIYA+ G++
Sbjct: 480 SEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWE 539
Query: 448 DVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREA 507
+ ++RK M++ V K PG SW E+++K H+F D SHP + I+ L ++ ++E
Sbjct: 540 EEGKMRKRMQEIGVTKRPGSSWTEIKRKRHVFIAAD-TSHPMYNQIVEFLRELRKKMKEE 598
Query: 508 GYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAI 567
GY P +S VLHDV++E+K +L YHSEKLAVA+ ++ EG I+V KNLR C DCH AI
Sbjct: 599 GYVPATSLVLHDVEDEQKEENLVYHSEKLAVAFAILSTEEGTAIKVFKNLRSCVDCHGAI 658
Query: 568 KLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
K IS + R+I +RD+ RFH F++G CSC DYW
Sbjct: 659 KFISNITKRKITVRDSTRFHCFENGQCSCGDYW 691
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 93/399 (23%), Positives = 174/399 (43%), Gaps = 57/399 (14%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MP R++ SW MV GY E G++ EA LF +M EK+ SWT M+ G+++ + ++A L+
Sbjct: 146 MPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLY 205
Query: 61 DMMP----------------------------------------EKDVVAQTNMVLGYCQ 80
+M + D V ++++ Y +
Sbjct: 206 SLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGK 265
Query: 81 DGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVM----PEKNEVSWTAM 136
G +DE R IFD++ +K+V+SWT+MI Y ++R LF + NE ++ +
Sbjct: 266 CGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGV 325
Query: 137 LMGYTQCGRIQDAWELFKAMPMKSV----VASNSMILGLGQNGEVQKARVVFDQMREKDD 192
L + ++ M AS+S++ + G ++ A+ V D + D
Sbjct: 326 LNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDL 385
Query: 193 ATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQ 252
+W+ +I + G E + F L+ K G + + + ++VLS C ++ G +
Sbjct: 386 VSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYS 445
Query: 253 LV---RCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASK-DIVMWNSIISGYAQYGL 308
+ R D Y + L+ + + G + K + K +W S++ G + YG
Sbjct: 446 ITEKHRLSHTSDHY--TCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGN 503
Query: 309 GEKSLKVFHEMFSSGVMPDD-VTLVGVLSACSYTGKVKE 346
+ + + E+F + P++ VT V + + + GK +E
Sbjct: 504 IDLAEEAAQELFK--IEPENPVTYVTMANIYAAAGKWEE 540
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 56/91 (61%)
Query: 229 SLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNF 288
+ +++ VC+ +L+ G++VH + F + + + L+ MY KCG LV + +FD
Sbjct: 87 TYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEM 146
Query: 289 ASKDIVMWNSIISGYAQYGLGEKSLKVFHEM 319
++D+ WN +++GYA+ GL E++ K+F EM
Sbjct: 147 PNRDLCSWNVMVNGYAEVGLLEEARKLFDEM 177
>gi|224123788|ref|XP_002319164.1| predicted protein [Populus trichocarpa]
gi|222857540|gb|EEE95087.1| predicted protein [Populus trichocarpa]
Length = 989
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 233/637 (36%), Positives = 357/637 (56%), Gaps = 48/637 (7%)
Query: 11 AMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVA 70
A++ YV I A +F +NVV W VML F + + ++ R+F M K ++
Sbjct: 354 ALLDLYVNCSDIKTAHEMFLTAQTENVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIP 413
Query: 71 QTNM---VLGYCQD-GRVDEGREIFDEMPKK----NVISWTTMISGYVNNNRIDVARKLF 122
+L C G +D G +I ++ K NV + +I Y + ++D A +
Sbjct: 414 NQFTYPSILRTCTSVGALDLGEQIHTQVIKTGFQFNVYVCSVLIDMYAKHGKLDTAHVIL 473
Query: 123 EVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASN----------------- 165
+ E + VSWTA++ GY Q +A + FK M + + + N
Sbjct: 474 RTLTEDDVVSWTALISGYAQHNLFAEALKHFKEMLNRGIQSDNIGFSSAISACAGIQALN 533
Query: 166 --------SMILGLGQN--------------GEVQKARVVFDQMREKDDATWSGMIKVYE 203
S + G ++ G +++A + F+++ KD +W+G+I +
Sbjct: 534 QGRQIHAQSYVSGYSEDLSIGNALVSLYARCGRIKEAYLEFEKIDAKDSISWNGLISGFA 593
Query: 204 RKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVY 263
+ GY + + +F M + + +F + S +S A++A++ G+Q+HA +++ FD D+
Sbjct: 594 QSGYCEDALKVFAQMNRAKLEASFFTFGSAVSAAANIANIKQGKQIHAMIIKRGFDSDIE 653
Query: 264 VASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSG 323
V++ LIT Y KCG + + F K+ V WN++I+GY+Q+G G +++ +F +M G
Sbjct: 654 VSNALITFYAKCGSIEDARREFCEMPEKNDVSWNAMITGYSQHGYGNEAVNLFEKMKQVG 713
Query: 324 VMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDA 383
MP+ VT VGVLSACS+ G V +G FESM ++ + PK HYAC+VDL+ RAG + A
Sbjct: 714 EMPNHVTFVGVLSACSHVGLVTKGLGYFESMSKEHGLVPKPAHYACVVDLISRAGFLSRA 773
Query: 384 MKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQ 443
K IE MP EPDA IW +LL AC H +++ E AA+ LL+LEP+++ Y+LLSN+YA
Sbjct: 774 RKFIEEMPIEPDATIWRTLLSACTVHKNVEVGEFAAQHLLELEPEDSATYVLLSNMYAVS 833
Query: 444 GRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGL 503
G++ + R+ MR R V K PG SWIEV+ VH F D + HP I L ++
Sbjct: 834 GKWDCRDQTRQMMRNRGVKKEPGRSWIEVKNSVHAFYVGDRL-HPLADKIYEFLAELNKK 892
Query: 504 LREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDC 563
E GY D +L+DV++E+K ++ HSEKLA+ +GL+ L + VPI VMKNLRVC DC
Sbjct: 893 AAEIGYFQDRYSLLNDVEQEQKDPTVYIHSEKLAITFGLLSLSDTVPIHVMKNLRVCKDC 952
Query: 564 HSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
HS IK +SK+ R II+RDA RFHHF+ G+CSC+DYW
Sbjct: 953 HSWIKFVSKISNRAIIVRDAYRFHHFEGGICSCKDYW 989
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 136/547 (24%), Positives = 231/547 (42%), Gaps = 129/547 (23%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV----VSWTVML------------ 44
MP R+V SW ++ G++E+ M LF M E+NV +S+ +L
Sbjct: 71 MPNRSVRSWDKIISGFMEKKMSNRVLDLFSCMIEENVSPTEISFASVLRACSGHRIGIRY 130
Query: 45 ------------------------GGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQ 80
G + ++ I AR++FD + KD V+ M+ G+ Q
Sbjct: 131 AEQIHARIICHGLLCSPIISNPLIGLYAKNGLIISARKVFDNLCTKDSVSWVAMISGFSQ 190
Query: 81 DGRVDEGREIFDEMPKKNVIS----WTTMISG--------------------------YV 110
+G +E +F EM + +++++SG YV
Sbjct: 191 NGYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQLHALVFKYGSSLETYV 250
Query: 111 NNNRIDV---------ARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAM----- 156
N + + A K+F M K+EVS+ +++ G Q G A ELF M
Sbjct: 251 CNALVTLYSRMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQQGFSDGALELFTKMKRDYL 310
Query: 157 --------PMKSVVASNSMIL------------GLGQN--------------GEVQKARV 182
+ S ASN + G+ + +++ A
Sbjct: 311 KPDCVTVASLLSACASNGALCKGEQLHSYVIKAGISSDMIVEGALLDLYVNCSDIKTAHE 370
Query: 183 VFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLAS 242
+F + ++ W+ M+ + + E +F MQ +G+ N + S+L C S+ +
Sbjct: 371 MFLTAQTENVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQFTYPSILRTCTSVGA 430
Query: 243 LDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISG 302
LD G Q+H Q+++ F +VYV SVLI MY K G+L +I D+V W ++ISG
Sbjct: 431 LDLGEQIHTQVIKTGFQFNVYVCSVLIDMYAKHGKLDTAHVILRTLTEDDVVSWTALISG 490
Query: 303 YAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIF-ESMKSKYLVE 361
YAQ+ L ++LK F EM + G+ D++ +SAC+ + +GR+I +S S Y +
Sbjct: 491 YAQHNLFAEALKHFKEMLNRGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYVSGYSED 550
Query: 362 PKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL------GACRTHMKLDLA 415
+ +V L R G++++A E + D+I W L+ G C +K+ A
Sbjct: 551 LSIGN--ALVSLYARCGRIKEAYLEFEKID-AKDSISWNGLISGFAQSGYCEDALKV-FA 606
Query: 416 EVAAKKL 422
++ KL
Sbjct: 607 QMNRAKL 613
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 129/522 (24%), Positives = 233/522 (44%), Gaps = 78/522 (14%)
Query: 82 GRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKN----EVSWTAML 137
G +D ++F++MP ++V SW +ISG++ + LF M E+N E+S+ ++L
Sbjct: 59 GDLDGVVKVFEDMPNRSVRSWDKIISGFMEKKMSNRVLDLFSCMIEENVSPTEISFASVL 118
Query: 138 MGYTQCGRI------QDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKD 191
+ RI Q + + S + SN +I +NG + AR VFD + KD
Sbjct: 119 RACSG-HRIGIRYAEQIHARIICHGLLCSPIISNPLIGLYAKNGLIISARKVFDNLCTKD 177
Query: 192 DATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPS---LISVLSVCASLASLDHGRQ 248
+W MI + + GYE E I LF M G+ FP+ SVLS C + D G Q
Sbjct: 178 SVSWVAMISGFSQNGYEEEAIHLFCEMHTAGI---FPTPYVFSSVLSGCTKIKLFDVGEQ 234
Query: 249 VHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGL 308
+HA + + ++ YV + L+T+Y + V + +F SKD V +NS+ISG AQ G
Sbjct: 235 LHALVFKYGSSLETYVCNALVTLYSRMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQQGF 294
Query: 309 GEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFE-----SMKSKYLVEP- 362
+ +L++F +M + PD VT+ +LSAC+ G + +G ++ + S +VE
Sbjct: 295 SDGALELFTKMKRDYLKPDCVTVASLLSACASNGALCKGEQLHSYVIKAGISSDMIVEGA 354
Query: 363 -----------KTEH-------------YACMVDLLGRAGQVEDAMKLIEAMPFE---PD 395
KT H + M+ G+ + ++ ++ M + P+
Sbjct: 355 LLDLYVNCSDIKTAHEMFLTAQTENVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIPN 414
Query: 396 AIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPK-NAGPYILLSNIYASQGRFHDVAELRK 454
+ S+L C + LDL E ++++ + N +L ++YA G+ + +
Sbjct: 415 QFTYPSILRTCTSVGALDLGEQIHTQVIKTGFQFNVYVCSVLIDMYAKHGKLDTAHVILR 474
Query: 455 NMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSS 514
+ + +V+ SW + +G + +H + L+ +L +
Sbjct: 475 TLTEDDVV-----SWTA------LISG-----YAQHNLFAEALKHFKEMLNRGIQSDNIG 518
Query: 515 FV--------LHDVDEEEKVHSLRY---HSEKLAVAYGLVKL 545
F + +++ ++H+ Y +SE L++ LV L
Sbjct: 519 FSSAISACAGIQALNQGRQIHAQSYVSGYSEDLSIGNALVSL 560
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 125/268 (46%), Gaps = 28/268 (10%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
+ E +VVSWTA++ GY + + EA F +M + + S + GF S I +
Sbjct: 476 LTEDDVVSWTALISGYAQHNLFAEALKHFKEMLNRGIQSDNI---GF--SSAISACAGIQ 530
Query: 61 DMMPEKDVVAQTNMVLGYCQD--------------GRVDEGREIFDEMPKKNVISWTTMI 106
+ + + AQ+ V GY +D GR+ E F+++ K+ ISW +I
Sbjct: 531 ALNQGRQIHAQS-YVSGYSEDLSIGNALVSLYARCGRIKEAYLEFEKIDAKDSISWNGLI 589
Query: 107 SGYVNNNRIDVARKLFEVMPE-KNEVSWTAMLMGYTQCGRIQDAWE--LFKAMPMK---- 159
SG+ + + A K+F M K E S+ + I + + AM +K
Sbjct: 590 SGFAQSGYCEDALKVFAQMNRAKLEASFFTFGSAVSAAANIANIKQGKQIHAMIIKRGFD 649
Query: 160 -SVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLM 218
+ SN++I + G ++ AR F +M EK+D +W+ MI Y + GY E ++LF M
Sbjct: 650 SDIEVSNALITFYAKCGSIEDARREFCEMPEKNDVSWNAMITGYSQHGYGNEAVNLFEKM 709
Query: 219 QKEGVRVNFPSLISVLSVCASLASLDHG 246
++ G N + + VLS C+ + + G
Sbjct: 710 KQVGEMPNHVTFVGVLSACSHVGLVTKG 737
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 64/122 (52%)
Query: 218 MQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGE 277
M+ G+ N + I +L +C + SL +++H ++++ F + + + L+ +Y G+
Sbjct: 1 MEHRGICANCQTYIWLLDLCLNSGSLVECKKLHGKILKLGFGNESVLCNKLVDVYFALGD 60
Query: 278 LVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSA 337
L +F++ ++ + W+ IISG+ + + + L +F M V P +++ VL A
Sbjct: 61 LDGVVKVFEDMPNRSVRSWDKIISGFMEKKMSNRVLDLFSCMIEENVSPTEISFASVLRA 120
Query: 338 CS 339
CS
Sbjct: 121 CS 122
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 62/141 (43%), Gaps = 14/141 (9%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPE----KNVVSWTVMLGGFIRDSRIDDA 56
MPE+N VSW AM+ GY + G EA LF +M + N V++ +L +
Sbjct: 678 MPEKNDVSWNAMITGYSQHGYGNEAVNLFEKMKQVGEMPNHVTFVGVLSACSHVGLVTKG 737
Query: 57 RRLFDMMPEKDVVAQTNMVLGYCQD-----GRVDEGREIFDEMP-KKNVISWTTMISGYV 110
F+ M ++ + D G + R+ +EMP + + W T++S
Sbjct: 738 LGYFESMSKEHGLVPKPAHYACVVDLISRAGFLSRARKFIEEMPIEPDATIWRTLLSACT 797
Query: 111 NNNRIDV----ARKLFEVMPE 127
+ ++V A+ L E+ PE
Sbjct: 798 VHKNVEVGEFAAQHLLELEPE 818
>gi|297741272|emb|CBI32403.3| unnamed protein product [Vitis vinifera]
Length = 658
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 234/612 (38%), Positives = 359/612 (58%), Gaps = 29/612 (4%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF-------DM 62
T +V Y G ++ + F Q+P+K+V +W M+ ++ + +A F ++
Sbjct: 55 TRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVHNGHFHEAIGCFYQLLLVSEI 114
Query: 63 MPEKDVVAQTNMVLGYCQDGRVDEGREI----FDEMPKKNVISWTTMISGYVNNNRIDVA 118
P+ VL C G + +GR+I F + NV ++I Y +A
Sbjct: 115 RPDFYTFPP---VLKAC--GTLVDGRKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIA 169
Query: 119 RKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGL------- 171
R LF+ MP ++ SW AM+ G Q G A ++ M ++ + + ++ +
Sbjct: 170 RSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVFVDM 229
Query: 172 -GQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQK-EGVRVNFPS 229
+ G + A VF+ + KD +W+ +I Y + G E I+++ +M++ + + N +
Sbjct: 230 YAKLGLLDSAHKVFEIIPVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGT 289
Query: 230 LISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFA 289
+S+L A + +L G ++H ++++ +DV+VA+ LI +Y KCG LV +F
Sbjct: 290 WVSILPAYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVP 349
Query: 290 SKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGRE 349
+ V WN+IIS + +G EK+LK+F EM GV PD VT V +LSACS++G V+EG+
Sbjct: 350 QESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKW 409
Query: 350 IFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTH 409
F M+ +Y ++P +HY CMVDLLGRAG +E A I+ MP +PDA IWG+LLGACR H
Sbjct: 410 CFRLMQ-EYGIKPSLKHYGCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGALLGACRIH 468
Query: 410 MKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSW 469
++L + A+ +L +++ KN G Y+LLSNIYA+ G++ V ++R R+R + K PG S
Sbjct: 469 GNIELGKFASDRLFEVDSKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWST 528
Query: 470 IEVEKKVHMF-TGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHS 528
IEV +KV +F TG SHP+ I L + ++ GY PD SFVL DV+E+EK H
Sbjct: 529 IEVNRKVDVFYTGNQ--SHPKCKEIYEELRVLTAKMKSLGYIPDYSFVLQDVEEDEKEHI 586
Query: 529 LRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHH 588
L HSE+LA+A+G++ P PIR+ KNLRVCGDCH+A K IS++ REI++RD+NRFHH
Sbjct: 587 LTSHSERLAIAFGIISTPPKSPIRIFKNLRVCGDCHNATKFISRITQREIVVRDSNRFHH 646
Query: 589 FKDGLCSCRDYW 600
FKDG+CSC DYW
Sbjct: 647 FKDGICSCGDYW 658
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 123/260 (47%), Gaps = 17/260 (6%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMP 64
NV +++ Y G A +LF MP +++ SW M+ G I++ A + D M
Sbjct: 149 NVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMR 208
Query: 65 EKDVVAQTNMVLG--------YCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRID 116
+ + V+ Y + G +D ++F+ +P K+VISW T+I+GY N
Sbjct: 209 LEGIKMNFVTVVSILPVFVDMYAKLGLLDSAHKVFEIIPVKDVISWNTLITGYAQNGLAS 268
Query: 117 VARKLFEVMPEKNEV-----SWTAMLMGYTQCGRIQDAWEL----FKAMPMKSVVASNSM 167
A +++++M E E+ +W ++L Y G +Q ++ K V + +
Sbjct: 269 EAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKTNLHLDVFVATCL 328
Query: 168 ILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNF 227
I G+ G + A +F Q+ ++ TW+ +I + G+ + + LF M EGV+ +
Sbjct: 329 IDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDH 388
Query: 228 PSLISVLSVCASLASLDHGR 247
+ +S+LS C+ ++ G+
Sbjct: 389 VTFVSLLSACSHSGFVEEGK 408
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 139/314 (44%), Gaps = 41/314 (13%)
Query: 152 LFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEV 211
L A ++S+ S ++ G+V +R FDQ+ +KD W+ MI Y G+ E
Sbjct: 42 LVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVHNGHFHEA 101
Query: 212 IDLF-TLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLIT 270
I F L+ +R +F + VL C +L GR++H + F +V+VA+ LI
Sbjct: 102 IGCFYQLLLVSEIRPDFYTFPPVLKACGTLVD---GRKIHCWAFKLGFQWNVFVAASLIH 158
Query: 271 MYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVT 330
MY + G + +FD+ +D+ WN++ISG Q G ++L V EM G+ + VT
Sbjct: 159 MYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVT 218
Query: 331 LVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAM 390
+V +L VD+ + G ++ A K+ E +
Sbjct: 219 VVSILPV--------------------------------FVDMYAKLGLLDSAHKVFEII 246
Query: 391 PFEPDAIIWGSLL-GACRTHMKLDLAEVAA--KKLLQLEPKNAGPYILLSNIYASQGRFH 447
P + D I W +L+ G + + + EV ++ ++ P N G ++ + YA G
Sbjct: 247 PVK-DVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIP-NQGTWVSILPAYAHVGALQ 304
Query: 448 DVAELRKNMRKRNV 461
++ + K N+
Sbjct: 305 QGMKIHGRVIKTNL 318
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 73/158 (46%), Gaps = 6/158 (3%)
Query: 249 VHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGL 308
+HA LV +++++ L+ +Y G++ + FD KD+ WNS+IS Y G
Sbjct: 38 LHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVHNGH 97
Query: 309 GEKSLKVFHE-MFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHY 367
+++ F++ + S + PD T VL AC G + +GR+I K +
Sbjct: 98 FHEAIGCFYQLLLVSEIRPDFYTFPPVLKAC---GTLVDGRKI-HCWAFKLGFQWNVFVA 153
Query: 368 ACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
A ++ + R G A L + MPF D W +++
Sbjct: 154 ASLIHMYSRFGFTGIARSLFDDMPFR-DMGSWNAMISG 190
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/217 (20%), Positives = 101/217 (46%), Gaps = 18/217 (8%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPE-----KNVVSWTVMLGGFIRDSRIDD 55
+P ++V+SW ++ GY + G+ +EA ++ M E N +W +L + +
Sbjct: 246 IPVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQ 305
Query: 56 ARRLFDMMPEK----DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVN 111
++ + + DV T ++ Y + GR+ + +F ++P+++ ++W +IS +
Sbjct: 306 GMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGI 365
Query: 112 NNRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVAS--- 164
+ + KLF M ++ + V++ ++L + G +++ F+ M + S
Sbjct: 366 HGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQEYGIKPSLKH 425
Query: 165 -NSMILGLGQNGEVQKARVVFDQMREKDDAT-WSGMI 199
M+ LG+ G ++ A M + DA+ W ++
Sbjct: 426 YGCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGALL 462
>gi|357117655|ref|XP_003560579.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Brachypodium distachyon]
Length = 614
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 225/558 (40%), Positives = 334/558 (59%), Gaps = 45/558 (8%)
Query: 86 EGREIFDEMPKKN----VISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYT 141
EGR++ M K V T +I YV +D AR + + MPE+N VSWTAM+ GY+
Sbjct: 59 EGRQVHAHMVKARYRPPVYLATRLIILYVRCGALDDARNVLDGMPERNVVSWTAMISGYS 118
Query: 142 QCGRIQDAWELFKAM----------PMKSVVAS--------------------------- 164
Q GR +A ELF M + +V+ S
Sbjct: 119 QSGRHAEALELFIRMLRAGCKANEFTLATVLTSCPVHQSIQQVEQVHSLVVKTNFESHMF 178
Query: 165 --NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEG 222
+S++ G++G +Q+AR VFD + E+D + + +I Y + G + E +DLF + G
Sbjct: 179 VGSSLLDMYGKSGNIQEARKVFDMLPERDTVSCTAIISGYAQLGLDDEALDLFRQLYSSG 238
Query: 223 VRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGK 282
++ N+ + ++L+ + LASL++G+QVH ++R + + + + LI MY KCG+L+ +
Sbjct: 239 MQCNYVTFTTLLTSLSGLASLNYGKQVHGLILRKELPFFIVLQNSLIDMYSKCGKLLYSR 298
Query: 283 LIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTG 342
+FDN + + WN+++ GY ++G+G++ +++F M + V PD VTL+ VLS CS+ G
Sbjct: 299 RVFDNMPQRSAISWNAMLMGYGRHGIGQEVVQLFRTM-TEEVKPDSVTLLAVLSGCSHGG 357
Query: 343 KVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSL 402
V EG +IF+ + + HY C++DLLGR+GQ++ A+ LIE MPFEP IWGSL
Sbjct: 358 LVDEGLDIFDLIVKEQNAVIHIGHYGCVIDLLGRSGQLQKALDLIEHMPFEPTPAIWGSL 417
Query: 403 LGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVI 462
LGACR H+ + + EV A+KLL +EP NAG Y++LSNIYA+ G + DV +RK M + V
Sbjct: 418 LGACRVHINVSVGEVVAQKLLDMEPGNAGNYVILSNIYAAAGMWKDVFRVRKLMLENTVT 477
Query: 463 KPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDE 522
K P SWI ++K +H F + HP I ++++ ++ AG+ PD S VLHDVD+
Sbjct: 478 KEPAKSWIILDKVIHTFHSSERF-HPRKKDINAKIKEVYVDVKAAGFVPDLSCVLHDVDD 536
Query: 523 EEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRD 582
E+K L HSEKLA+ +GL+ P G+ I+VMKNLR+C DCH+ K +SKV GREI LRD
Sbjct: 537 EQKERMLLGHSEKLAITFGLMNTPPGLTIQVMKNLRICVDCHNFAKFVSKVYGREISLRD 596
Query: 583 ANRFHHFKDGLCSCRDYW 600
NRFH KDG C+C DYW
Sbjct: 597 KNRFHLLKDGACTCGDYW 614
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 141/296 (47%), Gaps = 50/296 (16%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPE---- 65
T ++ YV G + +A + MPE+NVVSWT M+ G+ + R +A LF M
Sbjct: 80 TRLIILYVRCGALDDARNVLDGMPERNVVSWTAMISGYSQSGRHAEALELFIRMLRAGCK 139
Query: 66 -------------------------KDVVAQTN----MVLG------YCQDGRVDEGREI 90
+V +TN M +G Y + G + E R++
Sbjct: 140 ANEFTLATVLTSCPVHQSIQQVEQVHSLVVKTNFESHMFVGSSLLDMYGKSGNIQEARKV 199
Query: 91 FDEMPKKNVISWTTMISGY----VNNNRIDVARKLFEVMPEKNEVSWTAMLMGYT----- 141
FD +P+++ +S T +ISGY +++ +D+ R+L+ + N V++T +L +
Sbjct: 200 FDMLPERDTVSCTAIISGYAQLGLDDEALDLFRQLYSSGMQCNYVTFTTLLTSLSGLASL 259
Query: 142 QCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKV 201
G+ L K +P +V NS+I + G++ +R VFD M ++ +W+ M+
Sbjct: 260 NYGKQVHGLILRKELPF-FIVLQNSLIDMYSKCGKLLYSRRVFDNMPQRSAISWNAMLMG 318
Query: 202 YERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQ 257
Y R G EV+ LF M +E V+ + +L++VLS C+ +D G + +V+ Q
Sbjct: 319 YGRHGIGQEVVQLFRTMTEE-VKPDSVTLLAVLSGCSHGGLVDEGLDIFDLIVKEQ 373
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 129/271 (47%), Gaps = 50/271 (18%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMP--------------------------- 33
MPERNVVSWTAM+ GY + G EA LF +M
Sbjct: 102 MPERNVVSWTAMISGYSQSGRHAEALELFIRMLRAGCKANEFTLATVLTSCPVHQSIQQV 161
Query: 34 ------------EKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQD 81
E ++ + +L + + I +AR++FDM+PE+D V+ T ++ GY Q
Sbjct: 162 EQVHSLVVKTNFESHMFVGSSLLDMYGKSGNIQEARKVFDMLPERDTVSCTAIISGYAQL 221
Query: 82 GRVDEGREIFDEMPKK----NVISWTTMISGYVNNNRIDVARKLFEVMPEKNE----VSW 133
G DE ++F ++ N +++TT+++ ++ +++ ++ K V
Sbjct: 222 GLDDEALDLFRQLYSSGMQCNYVTFTTLLTSLSGLASLNYGKQVHGLILRKELPFFIVLQ 281
Query: 134 TAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREK--- 190
+++ Y++CG++ + +F MP +S ++ N+M++G G++G Q+ +F M E+
Sbjct: 282 NSLIDMYSKCGKLLYSRRVFDNMPQRSAISWNAMLMGYGRHGIGQEVVQLFRTMTEEVKP 341
Query: 191 DDATWSGMIKVYERKGYELEVIDLFTLMQKE 221
D T ++ G E +D+F L+ KE
Sbjct: 342 DSVTLLAVLSGCSHGGLVDEGLDIFDLIVKE 372
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 95/170 (55%), Gaps = 1/170 (0%)
Query: 222 GVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKG 281
G F + ++ C +L GRQVHA +V+ ++ VY+A+ LI +Y++CG L
Sbjct: 36 GADARFHDYDAAITACVERQALGEGRQVHAHMVKARYRPPVYLATRLIILYVRCGALDDA 95
Query: 282 KLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYT 341
+ + D +++V W ++ISGY+Q G ++L++F M +G ++ TL VL++C
Sbjct: 96 RNVLDGMPERNVVSWTAMISGYSQSGRHAEALELFIRMLRAGCKANEFTLATVLTSCPVH 155
Query: 342 GKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMP 391
+++ ++ S+ K E + ++D+ G++G +++A K+ + +P
Sbjct: 156 QSIQQVEQV-HSLVVKTNFESHMFVGSSLLDMYGKSGNIQEARKVFDMLP 204
>gi|297838665|ref|XP_002887214.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333055|gb|EFH63473.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 740
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 230/679 (33%), Positives = 379/679 (55%), Gaps = 81/679 (11%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
+P+ N+ SW ++ Y + G ++E F ++P+++ V+W V++ G+ + A + +
Sbjct: 64 IPQPNLFSWNNLLLAYSKSGHLSEMERTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAY 123
Query: 61 DMMPE---------------------------KDVVAQ-------TNMVLG------YCQ 80
+ M + K + Q + +++G Y +
Sbjct: 124 NTMMKDFSSNLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLDMYSK 183
Query: 81 DGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGY 140
G + + +++F + +N + + T++ G + I+ A +LF M EK+ VSW+AM+ G
Sbjct: 184 VGCISDAKKVFYGLDDRNTVMYNTLMGGLLACGMIEDALQLFRGM-EKDSVSWSAMIKGL 242
Query: 141 TQCGRIQDAWELFKAM----------PMKSVVASNSMILGLGQNGEVQK----------- 179
Q G ++A E F+ M P SV+ + + + ++
Sbjct: 243 AQNGMEKEAIECFREMKIEGLKMDQYPFGSVLPACGGLGAINDGRQIHACIIRTNLQDHI 302
Query: 180 ------------------ARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKE 221
A+ VFD+M++K+ +W+ M+ Y + G E + +F MQ+
Sbjct: 303 YVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAGEAVKIFLDMQRS 362
Query: 222 GVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKG 281
G+ + +L +S CA+++SL+ G Q H + + + V++ L+T+Y KCG++
Sbjct: 363 GIDPDHYTLGQAISACANISSLEEGSQFHGKAITAGLIHYITVSNSLVTLYGKCGDIDDS 422
Query: 282 KLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYT 341
+F+ +D V W +++S YAQ+G +++++F +M G+ PD VTL GV+SACS
Sbjct: 423 TRLFNEMNVRDEVSWTAMVSAYAQFGRAVEAIQLFDKMVQLGLKPDGVTLTGVISACSRA 482
Query: 342 GKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGS 401
G V++G+ FE M ++Y + P HY+CM+DL R+G++E+AM I MPF PDAI W +
Sbjct: 483 GLVEKGQRYFELMINEYGIVPSNGHYSCMIDLFSRSGRIEEAMGFINGMPFRPDAIGWTT 542
Query: 402 LLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNV 461
LL ACR L++ + AA+ L++L+P + Y LLS+IYAS+G++ VA+LR+ M+++NV
Sbjct: 543 LLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDCVAQLRRGMKEKNV 602
Query: 462 IKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVD 521
K PG SWI+ + K+H F+ D S P I LE++ + + GY PD+SFV HDV+
Sbjct: 603 RKEPGQSWIKWKGKLHSFSADD-ESSPYSDQIYAKLEELYQKIIDNGYKPDTSFVHHDVE 661
Query: 522 EEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILR 581
E K+ L HSE+LA+A+GL+ +P G+PIRV KNLRVC DCH+A K IS V GREI++R
Sbjct: 662 EAVKIKMLNCHSERLAIAFGLIFVPSGLPIRVGKNLRVCVDCHNATKHISSVTGREILVR 721
Query: 582 DANRFHHFKDGLCSCRDYW 600
DA RFH FKDG CSC D+W
Sbjct: 722 DAVRFHRFKDGTCSCGDFW 740
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 114/412 (27%), Positives = 208/412 (50%), Gaps = 18/412 (4%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDM 62
N+V A++R + A +F +P+ N+ SW +L + + + + R F+
Sbjct: 41 HNNIVHAYALIRSSIY------ARRVFDGIPQPNLFSWNNLLLAYSKSGHLSEMERTFEK 94
Query: 63 MPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKK-----NVISWTTMISGYVNNNRIDV 117
+P++D V ++ GY G V + ++ M K ++ TM+ +N + +
Sbjct: 95 LPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMKDFSSNLTRVTLMTMLKLSSSNGHVSL 154
Query: 118 ARKL----FEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQ 173
+++ ++ E + + +L Y++ G I DA ++F + ++ V N+++ GL
Sbjct: 155 GKQIHGQVIKLGFESYLLVGSPLLDMYSKVGCISDAKKVFYGLDDRNTVMYNTLMGGLLA 214
Query: 174 NGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISV 233
G ++ A +F M EKD +WS MIK + G E E I+ F M+ EG++++ SV
Sbjct: 215 CGMIEDALQLFRGM-EKDSVSWSAMIKGLAQNGMEKEAIECFREMKIEGLKMDQYPFGSV 273
Query: 234 LSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDI 293
L C L +++ GRQ+HA ++R +YV S LI MY KC L K +FD K++
Sbjct: 274 LPACGGLGAINDGRQIHACIIRTNLQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNV 333
Query: 294 VMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFES 353
V W +++ GY Q G +++K+F +M SG+ PD TL +SAC+ ++EG +
Sbjct: 334 VSWTAMVVGYGQTGRAGEAVKIFLDMQRSGIDPDHYTLGQAISACANISSLEEGSQFHGK 393
Query: 354 MKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
+ L+ T + +V L G+ G ++D+ +L M D + W +++ A
Sbjct: 394 AITAGLIHYITVSNS-LVTLYGKCGDIDDSTRLFNEMNVR-DEVSWTAMVSA 443
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 92/447 (20%), Positives = 164/447 (36%), Gaps = 116/447 (25%)
Query: 89 EIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQD 148
I +P ++ Y AR++F+ +P+ N SW +L+ Y++ G + +
Sbjct: 28 NIIRTLPHPETFLHNNIVHAYALIRSSIYARRVFDGIPQPNLFSWNNLLLAYSKSGHLSE 87
Query: 149 AWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYE 208
F+ +P ++D TW+ +I+ Y G
Sbjct: 88 MERTFEKLP-------------------------------DRDGVTWNVLIEGYSLSGLV 116
Query: 209 LEVIDLFTLMQKE-GVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASV 267
+ + M K+ + +L+++L + +S + G+Q+H Q+++ F+ + V S
Sbjct: 117 GAAVKAYNTMMKDFSSNLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSP 176
Query: 268 LITMYIKCGELVKGKLIFDNFASKDIVM------------------------------WN 297
L+ MY K G + K +F ++ VM W+
Sbjct: 177 LLDMYSKVGCISDAKKVFYGLDDRNTVMYNTLMGGLLACGMIEDALQLFRGMEKDSVSWS 236
Query: 298 SIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREI------- 350
++I G AQ G+ +++++ F EM G+ D VL AC G + +GR+I
Sbjct: 237 AMIKGLAQNGMEKEAIECFREMKIEGLKMDQYPFGSVLPACGGLGAINDGRQIHACIIRT 296
Query: 351 ----------------------------FESMKSKYLVEPKTEHYACMVDLLGRAGQVED 382
F+ MK K +V + MV G+ G+ +
Sbjct: 297 NLQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVS-----WTAMVVGYGQTGRAGE 351
Query: 383 AMKLIEAMP---FEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAG--PYILLS 437
A+K+ M +PD G + AC L+ K + AG YI +S
Sbjct: 352 AVKIFLDMQRSGIDPDHYTLGQAISACANISSLEEGSQFHGKAI-----TAGLIHYITVS 406
Query: 438 N----IYASQGRFHDVAELRKNMRKRN 460
N +Y G D L M R+
Sbjct: 407 NSLVTLYGKCGDIDDSTRLFNEMNVRD 433
Score = 46.6 bits (109), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 91/231 (39%), Gaps = 68/231 (29%)
Query: 237 CASLASLDHGRQVHAQLVRCQ---------------------------FD----VDVYVA 265
C L + H + +H ++R FD +++
Sbjct: 13 CIGLGASRHVKMIHGNIIRTLPHPETFLHNNIVHAYALIRSSIYARRVFDGIPQPNLFSW 72
Query: 266 SVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEM---FSS 322
+ L+ Y K G L + + F+ +D V WN +I GY+ GL ++K ++ M FSS
Sbjct: 73 NNLLLAYSKSGHLSEMERTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMKDFSS 132
Query: 323 GVMPDDVTLVGVLSACSYTGKVKEGREI--------FES----------MKSKY------ 358
+ VTL+ +L S G V G++I FES M SK
Sbjct: 133 NLT--RVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLDMYSKVGCISDA 190
Query: 359 ------LVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
L + T Y ++ L G +EDA++L M E D++ W +++
Sbjct: 191 KKVFYGLDDRNTVMYNTLMGGLLACGMIEDALQLFRGM--EKDSVSWSAMI 239
>gi|297738034|emb|CBI27235.3| unnamed protein product [Vitis vinifera]
Length = 696
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 224/540 (41%), Positives = 325/540 (60%), Gaps = 18/540 (3%)
Query: 78 YCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMP----EKNEVSW 133
Y + GRVD+ + +F+ ++++SW TMIS + ++R A F +M E + V+
Sbjct: 158 YAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTI 217
Query: 134 TAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILG-----LGQNGEVQKARVVFDQMR 188
++L + R+ E+ + + + NS + +V+ R VFD +
Sbjct: 218 ASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHIL 277
Query: 189 EKDDATWSGMIKVYERKGYELEVIDLFTLMQK-EGVRVNFPSLISVLSVCA-SLASLDHG 246
+ W+ MI Y R G + + + LF M K G+ N ++ SV+ C SLA++ G
Sbjct: 278 GRRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHSLAAIAKG 337
Query: 247 RQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQY 306
+++HA +R D+ V S L+ MY KCG L + +F+ +K+++ WN +I +
Sbjct: 338 KEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGMH 397
Query: 307 GLGEKSLKVFHEMFSSG-----VMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVE 361
G GE++L++F M + P++VT + V +ACS++G + EG +F MK + VE
Sbjct: 398 GKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSGLISEGLNLFYRMKHDHGVE 457
Query: 362 PKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAI-IWGSLLGACRTHMKLDLAEVAAK 420
P ++HYAC+VDLLGRAGQ+E+A +L+ MP E D + W SLLGACR H ++L EVAAK
Sbjct: 458 PTSDHYACVVDLLGRAGQLEEAYELVNTMPAEFDKVGAWSSLLGACRIHQNVELGEVAAK 517
Query: 421 KLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFT 480
LL LEP A Y+LLSNIY+S G ++ E+RKNMR+ V K PGCSWIE +VH F
Sbjct: 518 NLLHLEPNVASHYVLLSNIYSSAGLWNKAMEVRKNMRQMGVKKEPGCSWIEFRDEVHKFM 577
Query: 481 GRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAY 540
D VSHP+ + LE + +R+ GY PD+S VLH+VDE+EK + L HSEKLA+A+
Sbjct: 578 AGD-VSHPQSEQLHGFLETLSEKMRKEGYVPDTSCVLHNVDEDEKENLLCGHSEKLAIAF 636
Query: 541 GLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
G++ P G IRV KNLRVC DCH+A K ISK+M REII+RD RFHHFK+G CSC DYW
Sbjct: 637 GILNTPPGTTIRVAKNLRVCNDCHAATKFISKIMEREIIVRDVRRFHHFKEGTCSCGDYW 696
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 143/275 (52%), Gaps = 16/275 (5%)
Query: 140 YTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMI 199
Y +CG I D +N+++ + G V ++ +F+ ++D +W+ MI
Sbjct: 138 YGKCGGIGD-----------KTFTNNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMI 186
Query: 200 KVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFD 259
+ + E + F LM EGV ++ ++ SVL C+ L LD G+++HA ++R
Sbjct: 187 SSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDL 246
Query: 260 V-DVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHE 318
+ + +V S L+ MY C ++ G+ +FD+ + I +WN++ISGYA+ GL EK+L +F E
Sbjct: 247 IENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYARNGLDEKALILFIE 306
Query: 319 MFS-SGVMPDDVTLVGVLSACSYT-GKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGR 376
M +G++P+ T+ V+ AC ++ + +G+EI L T A +VD+ +
Sbjct: 307 MIKVAGLLPNTTTMASVMPACVHSLAAIAKGKEIHAYAIRNMLASDITVGSA-LVDMYAK 365
Query: 377 AGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMK 411
G + + ++ MP + I W L+ AC H K
Sbjct: 366 CGCLNLSRRVFNEMP-NKNVITWNVLIMACGMHGK 399
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 100/221 (45%), Gaps = 23/221 (10%)
Query: 190 KDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQV 249
+ A+W ++ R E I + M G R + + +VL + L L G Q+
Sbjct: 55 RSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGEQI 114
Query: 250 HAQLVRCQF-DVDVYVASVLITMYIKCG--------------------ELVKGKLIFDNF 288
HA V+ + V VA+ L+ MY KCG + K +F++F
Sbjct: 115 HAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDKTFTNNALMAMYAKLGRVDDSKALFESF 174
Query: 289 ASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGR 348
+D+V WN++IS ++Q ++L F M GV D VT+ VL ACS+ ++ G+
Sbjct: 175 VDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDVGK 234
Query: 349 EIFES-MKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIE 388
EI +++ L+E A +VD+ QVE ++ +
Sbjct: 235 EIHAYVLRNNDLIENSFVGSA-LVDMYCNCRQVESGRRVFD 274
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 97/223 (43%), Gaps = 28/223 (12%)
Query: 4 RNVVSWTAMVRGYVEEGMITEAGTLFWQM-------PEKNVVSWTVMLGGFIRDSRIDDA 56
R + W AM+ GY G+ +A LF +M P ++ +VM + I
Sbjct: 279 RRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMA-SVMPACVHSLAAIAKG 337
Query: 57 RRLFDM----MPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+ + M D+ + +V Y + G ++ R +F+EMP KNVI+W +I +
Sbjct: 338 KEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGMH 397
Query: 113 NRIDVARKLFEVM---------PEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVA 163
+ + A +LF+ M + NEV++ + + G I + LF M V
Sbjct: 398 GKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSGLISEGLNLFYRMKHDHGVE 457
Query: 164 SNS-----MILGLGQNGEVQKARVVFDQMREKDD--ATWSGMI 199
S ++ LG+ G++++A + + M + D WS ++
Sbjct: 458 PTSDHYACVVDLLGRAGQLEEAYELVNTMPAEFDKVGAWSSLL 500
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 62/299 (20%), Positives = 129/299 (43%), Gaps = 31/299 (10%)
Query: 52 RIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPK-----KNVISWTTMI 106
+++ RR+FD + + + M+ GY ++G ++ +F EM K N + +++
Sbjct: 265 QVESGRRVFDHILGRRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVM 324
Query: 107 SGYVNNNRIDVARKLFEVMPEKNEVS-----WTAMLMGYTQCGRIQDAWELFKAMPMKSV 161
V++ K +N ++ +A++ Y +CG + + +F MP K+V
Sbjct: 325 PACVHSLAAIAKGKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNV 384
Query: 162 VASNSMILGLGQNGEVQKARVVFDQM---------REKDDATWSGMIKVYERKGYELEVI 212
+ N +I+ G +G+ ++A +F M + ++ T+ + G E +
Sbjct: 385 ITWNVLIMACGMHGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSGLISEGL 444
Query: 213 DLFTLMQKE-GVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVL--- 268
+LF M+ + GV V+ + L+ ++ + +FD +S+L
Sbjct: 445 NLFYRMKHDHGVEPTSDHYACVVDLLGRAGQLEEAYEL-VNTMPAEFDKVGAWSSLLGAC 503
Query: 269 -ITMYIKCGELVKGKLIF--DNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGV 324
I ++ GE+ L+ N AS +++ N Y+ GL K+++V M GV
Sbjct: 504 RIHQNVELGEVAAKNLLHLEPNVASHYVLLSNI----YSSAGLWNKAMEVRKNMRQMGV 558
>gi|125570322|gb|EAZ11837.1| hypothetical protein OsJ_01713 [Oryza sativa Japonica Group]
Length = 877
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 233/645 (36%), Positives = 361/645 (55%), Gaps = 48/645 (7%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDM 62
+++V + A+V Y++ G + A +F +MP+ +VVSW ++ G + + A L
Sbjct: 234 DKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQ 293
Query: 63 MPEKDVVAQT---NMVLGYCQD-GRVDEGREIFDEMPKKNVIS----WTTMISGYVNNNR 114
M +V + +L C G D GR+I M K N S ++ Y N+
Sbjct: 294 MKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHF 353
Query: 115 IDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAM----------PMKSVVAS 164
+D ARK+F+ M ++ + A++ G + GR +A LF + + +V+ S
Sbjct: 354 LDDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKS 413
Query: 165 NSMILGLGQNGEVQK-----------------------------ARVVFDQMREKDDATW 195
+ + +V A VF++ D
Sbjct: 414 TASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIAC 473
Query: 196 SGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVR 255
+ MI + + I LF M ++G+ + L S+L+ CASL++ + G+QVHA L++
Sbjct: 474 TSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIK 533
Query: 256 CQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKV 315
QF D + + L+ Y KCG + +L F + + +V W+++I G AQ+G G+++L++
Sbjct: 534 RQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALEL 593
Query: 316 FHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLG 375
F M G+ P+ +T+ VL AC++ G V E + F SMK + ++ EHY+CM+DLLG
Sbjct: 594 FGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLG 653
Query: 376 RAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYIL 435
RAG+++DAM+L+ +MPF+ +A IWG+LLGA R H +L ++AA+KL LEP+ +G ++L
Sbjct: 654 RAGKLDDAMELVNSMPFQANASIWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVL 713
Query: 436 LSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMR 495
L+N YAS G +++VA++RK M+ N+ K P SWIEV+ KVH F D SHP I
Sbjct: 714 LANTYASAGMWNEVAKVRKLMKDSNIKKEPAMSWIEVKDKVHTFIVGD-KSHPMTKEIYA 772
Query: 496 MLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMK 555
L ++G L+ +AG+ P+ LHD+D EK L +HSE+LAVA+ L+ P G PIRV K
Sbjct: 773 KLVELGDLMSKAGFVPNVDVDLHDLDRSEKELLLSHHSERLAVAFALLSTPPGAPIRVKK 832
Query: 556 NLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
NLR+C DCH A K ISK++ REII+RD NRFHHF+DG CSC DYW
Sbjct: 833 NLRICRDCHVAFKFISKIVSREIIIRDINRFHHFRDGTCSCGDYW 877
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 159/328 (48%), Gaps = 12/328 (3%)
Query: 87 GREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRI 146
R FDE+P +SW+++++ Y NN A + F M + L +C
Sbjct: 56 ARRFFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPD 115
Query: 147 QDAWELFKAMPMKS-----VVASNSMILGLGQNGEVQKARVVFDQM-REKDDATWSGMIK 200
AM M + V +N+++ G G + AR VF++ E++ +W+G++
Sbjct: 116 ARLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMS 175
Query: 201 VYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDV 260
Y + + I +F M G++ V++ C +++ GRQVHA +VR +D
Sbjct: 176 AYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDK 235
Query: 261 DVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMF 320
DV+ A+ L+ MY+K G + +IF+ D+V WN++ISG G +++++ +M
Sbjct: 236 DVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMK 295
Query: 321 SSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHY--ACMVDLLGRAG 378
SG++P+ TL +L ACS G GR+I M ++ Y +VD+ +
Sbjct: 296 YSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIK---ANADSDDYIGVGLVDMYAKNH 352
Query: 379 QVEDAMKLIEAMPFEPDAIIWGSLLGAC 406
++DA K+ + M F D I+ +L+ C
Sbjct: 353 FLDDARKVFDWM-FHRDLILCNALISGC 379
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 112/456 (24%), Positives = 201/456 (44%), Gaps = 49/456 (10%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIR---DSRIDDAR 57
+P+ VSW+++V Y G+ A F M + V L ++ D+R+
Sbjct: 63 IPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPDARLGAQV 122
Query: 58 RLFDMMPE--KDVVAQTNMVLGYCQDGRVDEGREIFDEM-PKKNVISWTTMISGYVNNNR 114
M DV +V Y G +D+ R +F+E ++N +SW ++S YV N++
Sbjct: 123 HAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQ 182
Query: 115 IDVARKLFEVMP----EKNEVSWTAMLMGYTQCGRIQDAWELFKAMPM-----KSVVASN 165
A ++F M + E ++ ++ T I+ A AM + K V +N
Sbjct: 183 CGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIE-AGRQVHAMVVRMGYDKDVFTAN 241
Query: 166 SMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRV 225
+++ + G V A V+F++M + D +W+ +I G++ I+L M+ G+
Sbjct: 242 ALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVP 301
Query: 226 NFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIF 285
N +L S+L C+ + D GRQ+H +++ D D Y+ L+ MY K L + +F
Sbjct: 302 NVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVF 361
Query: 286 DNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVK 345
D +D+++ N++ISG + G +++L +F+E+ G+ + TL VL + +
Sbjct: 362 DWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAAS 421
Query: 346 EGRE----------IFESMKSKYLVE------------------PKTEHYAC--MVDLLG 375
R+ IF++ L++ + AC M+ L
Sbjct: 422 TTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITALS 481
Query: 376 RAGQVEDAMKLIEAM---PFEPDAIIWGSLLGACRT 408
+ E A+KL M EPD + SLL AC +
Sbjct: 482 QCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACAS 517
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 72/173 (41%), Gaps = 16/173 (9%)
Query: 238 ASLASLDHGRQVHAQLVRCQFDVDVYVASV---LITMYIKCGELVKGKLIFDNFASKDIV 294
A+ +L G +HA L++ +AS LI+ Y KC + FD V
Sbjct: 15 AAAQALLPGAHLHASLLKSG-----SLASFRNHLISFYSKCRRPCCARRFFDEIPDPCHV 69
Query: 295 MWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSAC--SYTGKVKEGREIFE 352
W+S+++ Y+ GL +++ FH M + GV ++ L VL + G +
Sbjct: 70 SWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPDARLGAQVHAMAMAT 129
Query: 353 SMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
S V +V + G G ++DA ++ E +A+ W L+ A
Sbjct: 130 GFGSDVFVANA------LVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSA 176
>gi|168042957|ref|XP_001773953.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674797|gb|EDQ61301.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 905
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 229/618 (37%), Positives = 352/618 (56%), Gaps = 20/618 (3%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEK----NVVSWTVMLGGFIRDSRIDDA 56
+ +R+VV + A++ + G EA +++M N ++ +L ++
Sbjct: 290 IADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAG 349
Query: 57 RRLFDMMPE----KDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+ + + E DV ++ Y + G + + RE+F MPK+++ISW +I+GY
Sbjct: 350 KLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARR 409
Query: 113 NRIDVARKLFEVMPEKN----EVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMI 168
A +L++ M + V++ +L D + + + ++S + SN +
Sbjct: 410 EDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDI-LRSGIKSNGHL 468
Query: 169 LGLGQN-----GEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGV 223
N G + +A+ VF+ + +D +W+ MI + + G LF MQ E +
Sbjct: 469 ANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEEL 528
Query: 224 RVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKL 283
+ + SVLS C + +L+ G+Q+H ++ +DV + + LI MYI+CG L +
Sbjct: 529 EPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLDVNLGNALINMYIRCGSLQDARN 588
Query: 284 IFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMP-DDVTLVGVLSACSYTG 342
+F + +D++ W ++I G A G K++++F +M + G P D T +LSAC++ G
Sbjct: 589 VFHSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPPDGSTFTSILSACNHAG 648
Query: 343 KVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSL 402
V EG +IF SM+S+Y V P EHY C+V LLGRA + ++A LI MPF PDA +W +L
Sbjct: 649 LVLEGYQIFSSMESEYGVLPTIEHYGCLVGLLGRARRFQEAETLINQMPFPPDAAVWETL 708
Query: 403 LGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVI 462
LGACR H + LAE AA L+L +N YILLSN+YA+ GR+ DVA++R+ M R +
Sbjct: 709 LGACRIHGNIALAEHAANNALKLNARNPAVYILLSNVYAAAGRWDDVAKIRRVMEGRGIR 768
Query: 463 KPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDE 522
K PG SWIEV+ +H F D SHPE I L+++ + EAGY PD+ VLHD+ +
Sbjct: 769 KEPGRSWIEVDNIIHEFIAAD-RSHPETAEIYAELKRLSVEMEEAGYFPDTQHVLHDLGK 827
Query: 523 EEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRD 582
+ SL HSE+LA+AYGL+K P G PIR+ KNLR+CGDCH+A K ISK++GREII RD
Sbjct: 828 AHQETSLCTHSERLAIAYGLIKTPPGTPIRIFKNLRICGDCHTASKFISKLVGREIIARD 887
Query: 583 ANRFHHFKDGLCSCRDYW 600
+NRFH FK+G CSC DYW
Sbjct: 888 SNRFHSFKNGKCSCEDYW 905
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 111/520 (21%), Positives = 245/520 (47%), Gaps = 66/520 (12%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEK----NVVSWTVMLGGFIRDSRIDDA 56
MP R+V+SW +++ Y ++G +A LF +M N +++ +L + +++
Sbjct: 88 MPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENG 147
Query: 57 RRLFDMMP----EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+++ + ++D Q +++ Y + G + R++F + ++V+S+ TM+ Y
Sbjct: 148 KKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQK 207
Query: 113 NRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKS----VVAS 164
+ LF M + ++V++ +L +T + + + K + +
Sbjct: 208 AYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVG 267
Query: 165 NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVR 224
+++ + G+V A+ F + ++D ++ +I + G+ +E + + M+ +GV
Sbjct: 268 TALVTMCVRCGDVDSAKQAFKGIADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVA 327
Query: 225 VNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLI 284
+N + +S+L+ C++ +L+ G+ +H+ + DV + + LI+MY +CG+L K + +
Sbjct: 328 LNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKAREL 387
Query: 285 FDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYT--- 341
F +D++ WN+II+GYA+ ++++++ +M S GV P VT + +LSAC+ +
Sbjct: 388 FYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAY 447
Query: 342 --------------------------------GKVKEGREIFESMKSKYLVEPKTEHYAC 369
G + E + +FE +++ ++ +
Sbjct: 448 ADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVIS-----WNS 502
Query: 370 MVDLLGRAGQVEDAMKLIEAMP---FEPDAIIWGSLLGACRTHMKLDLAEVAAKKL---- 422
M+ + G E A KL + M EPD I + S+L C+ L+L + ++
Sbjct: 503 MIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESG 562
Query: 423 LQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVI 462
LQL+ N G ++ N+Y G D + +++ R+V+
Sbjct: 563 LQLD-VNLGNALI--NMYIRCGSLQDARNVFHSLQHRDVM 599
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 97/384 (25%), Positives = 195/384 (50%), Gaps = 14/384 (3%)
Query: 34 EKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDV---VAQTNMVLG-YCQDGRVDEGRE 89
E + ++ +L R + +A+R+ M E V + +N+++ Y + V + +
Sbjct: 24 ETDRATYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVLDAHQ 83
Query: 90 IFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGR 145
+F EMP+++VISW ++IS Y A +LFE M N++++ ++L
Sbjct: 84 VFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAE 143
Query: 146 IQDA----WELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKV 201
+++ ++ KA + NS++ G+ G++ +AR VF + +D +++ M+ +
Sbjct: 144 LENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGL 203
Query: 202 YERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVD 261
Y +K Y E + LF M EG+ + + I++L + + LD G+++H V + D
Sbjct: 204 YAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSD 263
Query: 262 VYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFS 321
+ V + L+TM ++CG++ K F A +D+V++N++I+ AQ+G ++ + ++ M S
Sbjct: 264 IRVGTALVTMCVRCGDVDSAKQAFKGIADRDVVVYNALIAALAQHGHNVEAFEQYYRMRS 323
Query: 322 SGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVE 381
GV + T + +L+ACS T K E ++ S S+ + ++ + R G +
Sbjct: 324 DGVALNRTTYLSILNACS-TSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLP 382
Query: 382 DAMKLIEAMPFEPDAIIWGSLLGA 405
A +L MP + D I W +++
Sbjct: 383 KARELFYTMP-KRDLISWNAIIAG 405
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 153/306 (50%), Gaps = 16/306 (5%)
Query: 113 NRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSV----VASNSMI 168
+R DV+ E + ++ A+L T+ + +A + M V SN +I
Sbjct: 10 DREDVSNTHQPRPTETDRATYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLI 69
Query: 169 LGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFP 228
+ V A VF +M +D +W+ +I Y ++G++ + LF MQ G N
Sbjct: 70 NMYVKCRSVLDAHQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKI 129
Query: 229 SLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNF 288
+ IS+L+ C S A L++G+++H+Q+++ + D V + L++MY KCG+L + + +F
Sbjct: 130 TYISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGI 189
Query: 289 ASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGR 348
+ +D+V +N+++ YAQ ++ L +F +M S G+ PD VT + +L A + + EG+
Sbjct: 190 SPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGK 249
Query: 349 EIF-----ESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
I E + S V +V + R G V+ A + + + + D +++ +L+
Sbjct: 250 RIHKLTVEEGLNSDIRVG------TALVTMCVRCGDVDSAKQAFKGIA-DRDVVVYNALI 302
Query: 404 GACRTH 409
A H
Sbjct: 303 AALAQH 308
>gi|297719939|ref|NP_001172331.1| Os01g0355000 [Oryza sativa Japonica Group]
gi|53791352|dbj|BAD52598.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|215768699|dbj|BAH00928.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255673214|dbj|BAH91061.1| Os01g0355000 [Oryza sativa Japonica Group]
Length = 877
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 233/645 (36%), Positives = 361/645 (55%), Gaps = 48/645 (7%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDM 62
+++V + A+V Y++ G + A +F +MP+ +VVSW ++ G + + A L
Sbjct: 234 DKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQ 293
Query: 63 MPEKDVVAQT---NMVLGYCQD-GRVDEGREIFDEMPKKNVIS----WTTMISGYVNNNR 114
M +V + +L C G D GR+I M K N S ++ Y N+
Sbjct: 294 MKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHF 353
Query: 115 IDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAM----------PMKSVVAS 164
+D ARK+F+ M ++ + A++ G + GR +A LF + + +V+ S
Sbjct: 354 LDDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKS 413
Query: 165 NSMILGLGQNGEVQK-----------------------------ARVVFDQMREKDDATW 195
+ + +V A VF++ D
Sbjct: 414 TASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIAC 473
Query: 196 SGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVR 255
+ MI + + I LF M ++G+ + L S+L+ CASL++ + G+QVHA L++
Sbjct: 474 TSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIK 533
Query: 256 CQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKV 315
QF D + + L+ Y KCG + +L F + + +V W+++I G AQ+G G+++L++
Sbjct: 534 RQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALEL 593
Query: 316 FHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLG 375
F M G+ P+ +T+ VL AC++ G V E + F SMK + ++ EHY+CM+DLLG
Sbjct: 594 FGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLG 653
Query: 376 RAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYIL 435
RAG+++DAM+L+ +MPF+ +A IWG+LLGA R H +L ++AA+KL LEP+ +G ++L
Sbjct: 654 RAGKLDDAMELVNSMPFQANASIWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVL 713
Query: 436 LSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMR 495
L+N YAS G +++VA++RK M+ N+ K P SWIEV+ KVH F D SHP I
Sbjct: 714 LANTYASAGMWNEVAKVRKLMKDSNIKKEPAMSWIEVKDKVHTFIVGD-KSHPMTKEIYA 772
Query: 496 MLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMK 555
L ++G L+ +AG+ P+ LHD+D EK L +HSE+LAVA+ L+ P G PIRV K
Sbjct: 773 KLVELGDLMSKAGFVPNVDVDLHDLDRSEKELLLSHHSERLAVAFALLSTPPGAPIRVKK 832
Query: 556 NLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
NLR+C DCH A K ISK++ REII+RD NRFHHF+DG CSC DYW
Sbjct: 833 NLRICRDCHVAFKFISKIVSREIIIRDINRFHHFRDGTCSCGDYW 877
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 160/328 (48%), Gaps = 12/328 (3%)
Query: 87 GREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRI 146
R +FDE+P +SW+++++ Y NN A + F M + L +C
Sbjct: 56 ARRVFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPD 115
Query: 147 QDAWELFKAMPMKS-----VVASNSMILGLGQNGEVQKARVVFDQM-REKDDATWSGMIK 200
AM M + V +N+++ G G + AR VF++ E++ +W+G++
Sbjct: 116 ARLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMS 175
Query: 201 VYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDV 260
Y + + I +F M G++ V++ C +++ GRQVHA +VR +D
Sbjct: 176 AYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDK 235
Query: 261 DVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMF 320
DV+ A+ L+ MY+K G + +IF+ D+V WN++ISG G +++++ +M
Sbjct: 236 DVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMK 295
Query: 321 SSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHY--ACMVDLLGRAG 378
SG++P+ TL +L ACS G GR+I M ++ Y +VD+ +
Sbjct: 296 YSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIK---ANADSDDYIGVGLVDMYAKNH 352
Query: 379 QVEDAMKLIEAMPFEPDAIIWGSLLGAC 406
++DA K+ + M F D I+ +L+ C
Sbjct: 353 FLDDARKVFDWM-FHRDLILCNALISGC 379
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 112/456 (24%), Positives = 201/456 (44%), Gaps = 49/456 (10%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIR---DSRIDDAR 57
+P+ VSW+++V Y G+ A F M + V L ++ D+R+
Sbjct: 63 IPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPDARLGAQV 122
Query: 58 RLFDMMPE--KDVVAQTNMVLGYCQDGRVDEGREIFDEM-PKKNVISWTTMISGYVNNNR 114
M DV +V Y G +D+ R +F+E ++N +SW ++S YV N++
Sbjct: 123 HAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQ 182
Query: 115 IDVARKLFEVMP----EKNEVSWTAMLMGYTQCGRIQDAWELFKAMPM-----KSVVASN 165
A ++F M + E ++ ++ T I+ A AM + K V +N
Sbjct: 183 CGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIE-AGRQVHAMVVRMGYDKDVFTAN 241
Query: 166 SMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRV 225
+++ + G V A V+F++M + D +W+ +I G++ I+L M+ G+
Sbjct: 242 ALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVP 301
Query: 226 NFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIF 285
N +L S+L C+ + D GRQ+H +++ D D Y+ L+ MY K L + +F
Sbjct: 302 NVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVF 361
Query: 286 DNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVK 345
D +D+++ N++ISG + G +++L +F+E+ G+ + TL VL + +
Sbjct: 362 DWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAAS 421
Query: 346 EGRE----------IFESMKSKYLVE------------------PKTEHYAC--MVDLLG 375
R+ IF++ L++ + AC M+ L
Sbjct: 422 TTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITALS 481
Query: 376 RAGQVEDAMKLIEAM---PFEPDAIIWGSLLGACRT 408
+ E A+KL M EPD + SLL AC +
Sbjct: 482 QCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACAS 517
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 73/173 (42%), Gaps = 16/173 (9%)
Query: 238 ASLASLDHGRQVHAQLVRCQFDVDVYVASV---LITMYIKCGELVKGKLIFDNFASKDIV 294
A+ +L G +HA L++ +AS LI+ Y KC + +FD V
Sbjct: 15 AAAQALLPGAHLHASLLKSG-----SLASFRNHLISFYSKCRRPCCARRVFDEIPDPCHV 69
Query: 295 MWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSAC--SYTGKVKEGREIFE 352
W+S+++ Y+ GL +++ FH M + GV ++ L VL + G +
Sbjct: 70 SWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPDARLGAQVHAMAMAT 129
Query: 353 SMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
S V +V + G G ++DA ++ E +A+ W L+ A
Sbjct: 130 GFGSDVFVANA------LVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSA 176
>gi|255543164|ref|XP_002512645.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548606|gb|EEF50097.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 716
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 235/645 (36%), Positives = 367/645 (56%), Gaps = 48/645 (7%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDM 62
E N TA++ Y G + A F + K++VSWT M+ + + R D+ +LF
Sbjct: 73 ESNAFVGTALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVACYAENDRFQDSLQLFAE 132
Query: 63 MP---------------------------------------EKDVVAQTNMVLGYCQDGR 83
M E D+ ++ Y + G
Sbjct: 133 MRMVGFNPNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEMDLYVGVGLLDLYTKFGD 192
Query: 84 VDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEK----NEVSWTAMLMG 139
++ +F+EMPK +VI W+ MIS Y +N+ A +LF M N+ ++ ++L
Sbjct: 193 ANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSREAVELFGQMRRAFVLPNQFTFASVLQS 252
Query: 140 YTQCGRIQDAWEL----FKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATW 195
+Q ++ K +V SN+++ + G + + +F ++ +++ TW
Sbjct: 253 CASIENLQLGKQVHCHVLKVGLDGNVFVSNALMDVYAKCGRLDNSMKLFMELPNRNEVTW 312
Query: 196 SGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVR 255
+ MI Y + G + + L+ M + V+ + + SVL CASLA+++ G Q+H+ ++
Sbjct: 313 NTMIVGYVQSGDGDKALSLYKNMLECQVQASEVTYSSVLRACASLAAMELGTQIHSLSLK 372
Query: 256 CQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKV 315
+D DV V + LI MY KCG + +L+FD + +D + WN++ISGY+ +GL ++LK
Sbjct: 373 TIYDKDVVVGNALIDMYAKCGSIKNARLVFDMLSERDEISWNAMISGYSMHGLVGEALKA 432
Query: 316 FHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLG 375
F M + +P+ +T V +LSACS G + G+ F+SM Y +EP EHY CMV LLG
Sbjct: 433 FQMMQETECVPNKLTFVSILSACSNAGLLDIGQNYFKSMVQDYGIEPCMEHYTCMVWLLG 492
Query: 376 RAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYIL 435
R+G ++ A+KLIE +P EP+ +W +LLGAC H +DL ++A+++LQ++P++ ++L
Sbjct: 493 RSGHLDKAVKLIEEIPLEPNVKVWRALLGACVIHNDVDLGIMSAQQILQIDPQDEATHVL 552
Query: 436 LSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMR 495
LSNIYA R++ VA +RK M+ + V K PG SWIE + VH F+ D SHP+ MI
Sbjct: 553 LSNIYARTRRWNSVASVRKFMKNKGVKKEPGLSWIENQGIVHYFSVGD-TSHPDMKMISG 611
Query: 496 MLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMK 555
MLE + +AGY PD + VL DV+++EK L HSE+LA+A+GL++ P IR++K
Sbjct: 612 MLEWLNMKTEKAGYVPDLNAVLRDVEDDEKKRHLWVHSERLALAFGLIRTPSRGHIRILK 671
Query: 556 NLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
NLR+C DCHSAIKLISK++ R+II+RD NRFHHF+DG+CSC DYW
Sbjct: 672 NLRICTDCHSAIKLISKIVQRDIIIRDMNRFHHFQDGICSCGDYW 716
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 115/429 (26%), Positives = 208/429 (48%), Gaps = 26/429 (6%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMP----EKNVVSWTVMLGGFIRDSRIDDA 56
MP+RN VS+ +++GYV+ + E LF ++ E N +T +L + + A
Sbjct: 1 MPDRNTVSFVTLIQGYVQSFQLDEVVDLFSRVHREGHELNPFVFTTILKLLVSVECAELA 60
Query: 57 RRL----FDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
L + + E + T ++ Y G V+ R+ FD + K+++SWT M++ Y N
Sbjct: 61 YSLHACIYKLGHESNAFVGTALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVACYAEN 120
Query: 113 NRIDVARKLFEVMP----EKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMI 168
+R + +LF M N ++ +L C ++ A+ + K++ + M
Sbjct: 121 DRFQDSLQLFAEMRMVGFNPNHFTFAGVLKA---CIGLE-AFSVGKSVHGCVLKTCYEMD 176
Query: 169 LGLG--------QNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQK 220
L +G + G+ VF++M + D WS MI Y + E ++LF M++
Sbjct: 177 LYVGVGLLDLYTKFGDANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSREAVELFGQMRR 236
Query: 221 EGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVK 280
V N + SVL CAS+ +L G+QVH +++ D +V+V++ L+ +Y KCG L
Sbjct: 237 AFVLPNQFTFASVLQSCASIENLQLGKQVHCHVLKVGLDGNVFVSNALMDVYAKCGRLDN 296
Query: 281 GKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSY 340
+F +++ V WN++I GY Q G G+K+L ++ M V +VT VL AC+
Sbjct: 297 SMKLFMELPNRNEVTWNTMIVGYVQSGDGDKALSLYKNMLECQVQASEVTYSSVLRACAS 356
Query: 341 TGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWG 400
++ G +I S+ K + + ++D+ + G +++A +L+ M E D I W
Sbjct: 357 LAAMELGTQI-HSLSLKTIYDKDVVVGNALIDMYAKCGSIKNA-RLVFDMLSERDEISWN 414
Query: 401 SLLGACRTH 409
+++ H
Sbjct: 415 AMISGYSMH 423
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 133/271 (49%), Gaps = 16/271 (5%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRD-SRIDDAR-- 57
MP+ +V+ W+ M+ Y + EA LF QM V+ ++ + I++ +
Sbjct: 203 MPKHDVIPWSFMISRYAQSNQSREAVELFGQMRRAFVLPNQFTFASVLQSCASIENLQLG 262
Query: 58 -----RLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+ + + +V ++ Y + GR+D ++F E+P +N ++W TMI GYV +
Sbjct: 263 KQVHCHVLKVGLDGNVFVSNALMDVYAKCGRLDNSMKLFMELPNRNEVTWNTMIVGYVQS 322
Query: 113 NRIDVARKLFEVMPE----KNEVSWTAMLMGYTQCGRIQDAWEL----FKAMPMKSVVAS 164
D A L++ M E +EV+++++L ++ ++ K + K VV
Sbjct: 323 GDGDKALSLYKNMLECQVQASEVTYSSVLRACASLAAMELGTQIHSLSLKTIYDKDVVVG 382
Query: 165 NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVR 224
N++I + G ++ AR+VFD + E+D+ +W+ MI Y G E + F +MQ+
Sbjct: 383 NALIDMYAKCGSIKNARLVFDMLSERDEISWNAMISGYSMHGLVGEALKAFQMMQETECV 442
Query: 225 VNFPSLISVLSVCASLASLDHGRQVHAQLVR 255
N + +S+LS C++ LD G+ +V+
Sbjct: 443 PNKLTFVSILSACSNAGLLDIGQNYFKSMVQ 473
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 100/217 (46%), Gaps = 18/217 (8%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRL- 59
+P RN V+W M+ GYV+ G +A +L+ M E V + V +R A L
Sbjct: 304 LPNRNEVTWNTMIVGYVQSGDGDKALSLYKNMLECQVQASEVTYSSVLRACASLAAMELG 363
Query: 60 -------FDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+ +KDVV ++ Y + G + R +FD + +++ ISW MISGY +
Sbjct: 364 TQIHSLSLKTIYDKDVVVGNALIDMYAKCGSIKNARLVFDMLSERDEISWNAMISGYSMH 423
Query: 113 NRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVAS---- 164
+ A K F++M E N++++ ++L + G + FK+M +
Sbjct: 424 GLVGEALKAFQMMQETECVPNKLTFVSILSACSNAGLLDIGQNYFKSMVQDYGIEPCMEH 483
Query: 165 -NSMILGLGQNGEVQKARVVFDQM-REKDDATWSGMI 199
M+ LG++G + KA + +++ E + W ++
Sbjct: 484 YTCMVWLLGRSGHLDKAVKLIEEIPLEPNVKVWRALL 520
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 79/175 (45%), Gaps = 15/175 (8%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEK----NVVSWTVMLGGFIRDSRIDDA 56
+ ER+ +SW AM+ GY G++ EA F M E N +++ +L +D
Sbjct: 405 LSERDEISWNAMISGYSMHGLVGEALKAFQMMQETECVPNKLTFVSILSACSNAGLLDIG 464
Query: 57 RRLFDMMP-----EKDVVAQTNMVLGYCQDGRVDEGREIFDEMP-KKNVISWTTMISGYV 110
+ F M E + T MV + G +D+ ++ +E+P + NV W ++ V
Sbjct: 465 QNYFKSMVQDYGIEPCMEHYTCMVWLLGRSGHLDKAVKLIEEIPLEPNVKVWRALLGACV 524
Query: 111 NNNRIDV----ARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSV 161
+N +D+ A+++ ++ P+ +E + + Y + R + K M K V
Sbjct: 525 IHNDVDLGIMSAQQILQIDPQ-DEATHVLLSNIYARTRRWNSVASVRKFMKNKGV 578
>gi|224114351|ref|XP_002332376.1| predicted protein [Populus trichocarpa]
gi|222832200|gb|EEE70677.1| predicted protein [Populus trichocarpa]
Length = 660
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 241/618 (38%), Positives = 352/618 (56%), Gaps = 23/618 (3%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
+P + +++RG ++ + EA + +M + ++ + R +
Sbjct: 48 IPNPTSYTCNSIIRGCTDKNLHQEALLFYQEMMVQGLIPDRYTFPSLFKSCRNSSEGKQI 107
Query: 61 DMMPEK-----DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRI 115
K D AQ ++ Y G + R++FD+M K V+SW TMI + ++
Sbjct: 108 HCHSTKLGFASDTYAQNTLMNMYSNCGCLVSARKVFDKMEDKTVVSWATMIGVHAQWDQP 167
Query: 116 DVARKLFEVMPEK-----NEVSWTAMLMGYTQCGRIQD------AWELFKAMPMKSVVAS 164
+ A +LF+ M + NEV+ +L T C R +D E V
Sbjct: 168 NEAVRLFDRMMKSENVKPNEVTLVNVL---TACARARDLAMVKRIHEYIDEHGFGRHVVL 224
Query: 165 NSMILGL-GQNGEVQKARVVFDQMREKDDATWSGMIKVY-ERKGYELEVIDLFTLMQKEG 222
N++++ + + G VQ AR +FD+ +EK+ +W+ MI + E YE E + LF MQ +G
Sbjct: 225 NTVLMDVYCKCGCVQLARDLFDKAQEKNLFSWNIMINGHVEDSNYE-EALLLFREMQTKG 283
Query: 223 VRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGK 282
++ + ++ S+L C L +L+ G+ +HA + + + DVDV + + L+ MY KCG +
Sbjct: 284 IKGDKVTMASLLLACTHLGALELGKWLHAYIKKQRIDVDVALGTALVDMYAKCGSIETAI 343
Query: 283 LIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTG 342
+F KD++ W ++I G A G E +L+ F EM GV PD +T VGVL+ACS+ G
Sbjct: 344 QVFHEMPEKDVMTWTALILGLAMCGQAENALQYFDEMHIKGVKPDAITFVGVLAACSHAG 403
Query: 343 KVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSL 402
V EG F SM Y ++P EHY +VD+LGRAG++ +A +LI++MP PD + G L
Sbjct: 404 FVDEGISHFNSMSDTYGIQPTIEHYGGLVDILGRAGRIAEAEELIKSMPMAPDQFVLGGL 463
Query: 403 LGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVI 462
LGACR H L+ AE AAK+LL+++P ++G Y+LLSNIY S ++ + R+ M +R +
Sbjct: 464 LGACRIHGNLEAAERAAKQLLEIDPYHSGTYVLLSNIYKSSKKWEEAKRTRELMAERGMR 523
Query: 463 KPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDE 522
KPPGCS IEV VH F D SH + I MLE + L+ AGY PD S VL D+ E
Sbjct: 524 KPPGCSQIEVHGVVHEFVKGDS-SHRQSSEINEMLEDMISKLKNAGYVPDKSEVLFDMAE 582
Query: 523 EEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRD 582
EEK L HSEKLA+A+GL+ G PIRV+KNLR+C DCHSA KLISK+ REII+RD
Sbjct: 583 EEKETELSLHSEKLAIAFGLLSTSVGTPIRVVKNLRICSDCHSATKLISKLYNREIIVRD 642
Query: 583 ANRFHHFKDGLCSCRDYW 600
NRFHHFKDG CSCR +W
Sbjct: 643 RNRFHHFKDGTCSCRGFW 660
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 95/212 (44%), Gaps = 12/212 (5%)
Query: 247 RQVHAQLVRCQFDVDVYVASVLITM--YIKCGELVKGKLIFDNFASKDIVMWNSIISGYA 304
+Q+HAQ++R D + AS ++ + G L +L+F + NSII G
Sbjct: 5 KQIHAQMLRTGLFFDPFTASKIVAFCSLQESGSLQYARLVFSQIPNPTSYTCNSIIRGCT 64
Query: 305 QYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKT 364
L +++L + EM G++PD T + +C + EG++I +K T
Sbjct: 65 DKNLHQEALLFYQEMMVQGLIPDRYTFPSLFKSCRNSS---EGKQI-HCHSTKLGFASDT 120
Query: 365 EHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQ 424
++++ G + A K+ + M + + W +++G H + D A + +
Sbjct: 121 YAQNTLMNMYSNCGCLVSARKVFDKME-DKTVVSWATMIG---VHAQWDQPNEAVRLFDR 176
Query: 425 -LEPKNAGPY-ILLSNIYASQGRFHDVAELRK 454
++ +N P + L N+ + R D+A +++
Sbjct: 177 MMKSENVKPNEVTLVNVLTACARARDLAMVKR 208
>gi|224137724|ref|XP_002322628.1| predicted protein [Populus trichocarpa]
gi|222867258|gb|EEF04389.1| predicted protein [Populus trichocarpa]
Length = 559
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 222/565 (39%), Positives = 351/565 (62%), Gaps = 41/565 (7%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPE-KNVVSWTVMLGGFIRDSRIDDARRL 59
M ER+VV+WTA++ GY++ G+I +A LF ++ K+VV+WT ML G++R RI++A RL
Sbjct: 1 MHERDVVTWTAVISGYIKCGLIVDARRLFDRVDAIKDVVTWTAMLSGYVRLKRIEEAERL 60
Query: 60 FDMMPEKDVVAQTNMVLGY-------------------------------CQDGRVDEGR 88
F++MP K+VV+ M+ GY Q GRV+E R
Sbjct: 61 FEVMPVKNVVSWNTMIDGYGKNREVDKAIEVFERMHERNMVSWNAVIAALVQCGRVEEAR 120
Query: 89 EIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQD 148
FDEMPK++VISWTTM+ G + R+D ARK+F+ MPE+N VSW AM+ GY + R+ +
Sbjct: 121 RRFDEMPKRDVISWTTMVMGLARSGRVDEARKVFDRMPERNVVSWNAMVTGYAKNMRLDE 180
Query: 149 AWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYE 208
A++LF+ MP +++ + N+MI G QNGE+ AR VF++M EK+ +W+ MI Y ++G
Sbjct: 181 AFDLFERMPERNLSSWNTMITGFIQNGELAWARKVFNEMPEKNVVSWTTMITGYVQEGES 240
Query: 209 LEVIDLFTLMQKE-GVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASV 267
+ +F M K+ G R N + ++VL C+ +A L G+QVH + + + +VAS
Sbjct: 241 ESALKVFVEMIKDGGARPNEGTFVNVLGACSDMAGLGEGQQVHLLISKSVYQDRTFVASA 300
Query: 268 LITMYIKCGELVKGKLIFDN--FASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVM 325
L+ MY KCGEL + IFD+ + +D+V+WN +I+ YA +G G +++++F +M G
Sbjct: 301 LLNMYSKCGELSIARKIFDDVVISQRDLVLWNGMIAAYAHHGCGMEAIELFEDMQGLGFK 360
Query: 326 PDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMK 385
P+DV+ V +LSACS+ G V EG F+ + ++ + +H+AC+VDL GRAG++++A
Sbjct: 361 PNDVSYVELLSACSHAGLVDEGLNYFDELGRDNSIQLREDHHACLVDLCGRAGRLKEAYD 420
Query: 386 LIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGR 445
I+ + + + IWG LL C H L++ ++AAK+L + +P+NAG Y+LLSNIYAS +
Sbjct: 421 FIKQLGTKASSSIWGGLLAGCNAHGDLEIGQLAAKELEKEDPENAGTYLLLSNIYASGRK 480
Query: 446 FHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLR 505
+ + + +R M+++ + K PGCSWIEV +VH+F RD SH + +I ++ I ++
Sbjct: 481 WREASRVRLKMKEKGLKKQPGCSWIEVGNRVHVFLARD-KSHYQSNLIYSLVHDIHAEMK 539
Query: 506 EAGYCPDSSFVLHDVDEEEKVHSLR 530
A + P++ F VDE + H LR
Sbjct: 540 -AEHVPNNDF----VDERKIFHQLR 559
>gi|15223099|ref|NP_172286.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174869|sp|Q9LN01.1|PPR21_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g08070
gi|8778839|gb|AAF79838.1|AC026875_18 T6D22.15 [Arabidopsis thaliana]
gi|332190118|gb|AEE28239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 741
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 236/647 (36%), Positives = 367/647 (56%), Gaps = 50/647 (7%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPE----KNVVSWTVMLGGFIRDSRIDDARR 58
E N++ W M RG+ A L+ M N ++ +L + + ++
Sbjct: 96 EPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQ 155
Query: 59 L----FDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNR 114
+ + + D+ T+++ Y Q+GR+++ ++FD+ P ++V+S+T +I GY +
Sbjct: 156 IHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGY 215
Query: 115 IDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMIL----- 169
I+ A+KLF+ +P K+ VSW AM+ GY + G ++A ELFK M +V S ++
Sbjct: 216 IENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSA 275
Query: 170 --------------------GLGQN--------------GEVQKARVVFDQMREKDDATW 195
G G N GE++ A +F+++ KD +W
Sbjct: 276 CAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISW 335
Query: 196 SGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVR 255
+ +I Y E + LF M + G N +++S+L CA L ++D GR +H + +
Sbjct: 336 NTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDK 395
Query: 256 CQFDVD--VYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSL 313
V + + LI MY KCG++ +F++ K + WN++I G+A +G + S
Sbjct: 396 RLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASF 455
Query: 314 KVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDL 373
+F M G+ PDD+T VG+LSACS++G + GR IF +M Y + PK EHY CM+DL
Sbjct: 456 DLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDL 515
Query: 374 LGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPY 433
LG +G ++A ++I M EPD +IW SLL AC+ H ++L E A+ L+++EP+N G Y
Sbjct: 516 LGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSY 575
Query: 434 ILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMI 493
+LLSNIYAS GR+++VA+ R + + + K PGCS IE++ VH F D HP + I
Sbjct: 576 VLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKF-HPRNREI 634
Query: 494 MRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRV 553
MLE++ LL +AG+ PD+S VL +++EE K +LR+HSEKLA+A+GL+ G + +
Sbjct: 635 YGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTI 694
Query: 554 MKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
+KNLRVC +CH A KLISK+ REII RD RFHHF+DG+CSC DYW
Sbjct: 695 VKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741
Score = 158 bits (400), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 95/364 (26%), Positives = 173/364 (47%), Gaps = 41/364 (11%)
Query: 90 IFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVM------PEKNEVSW---------- 133
+F + + N++ W TM G+ ++ A KL+ M P +
Sbjct: 90 VFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKA 149
Query: 134 -----------------------TAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILG 170
T+++ Y Q GR++DA ++F P + VV+ ++I G
Sbjct: 150 FKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKG 209
Query: 171 LGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSL 230
G ++ A+ +FD++ KD +W+ MI Y G E ++LF M K VR + ++
Sbjct: 210 YASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTM 269
Query: 231 ISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFAS 290
++V+S CA S++ GRQVH + F ++ + + LI +Y KCGEL +F+
Sbjct: 270 VTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPY 329
Query: 291 KDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREI 350
KD++ WN++I GY L +++L +F EM SG P+DVT++ +L AC++ G + GR I
Sbjct: 330 KDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWI 389
Query: 351 FESMKSKYL-VEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTH 409
+ + V + ++D+ + G +E A ++ ++ W +++ H
Sbjct: 390 HVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSI-LHKSLSSWNAMIFGFAMH 448
Query: 410 MKLD 413
+ D
Sbjct: 449 GRAD 452
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 134/297 (45%), Gaps = 49/297 (16%)
Query: 2 PERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF- 60
P R+VVS+TA+++GY G I A LF ++P K+VVSW M+ G+ +A LF
Sbjct: 196 PHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFK 255
Query: 61 DMMPEK---DVVAQTNMVLGYCQDGRVDEGREI--------------------------- 90
DMM D +V Q G ++ GR++
Sbjct: 256 DMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCG 315
Query: 91 --------FDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVM----PEKNEVSWTAMLM 138
F+ +P K+VISW T+I GY + N A LF+ M N+V+ ++L
Sbjct: 316 ELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILP 375
Query: 139 GYTQCGRIQ-DAW-ELFKAMPMKSVVASNSMILGL----GQNGEVQKARVVFDQMREKDD 192
G I W ++ +K V ++S+ L + G+++ A VF+ + K
Sbjct: 376 ACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSL 435
Query: 193 ATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQV 249
++W+ MI + G DLF+ M+K G++ + + + +LS C+ LD GR +
Sbjct: 436 SSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHI 492
>gi|224079057|ref|XP_002305733.1| predicted protein [Populus trichocarpa]
gi|222848697|gb|EEE86244.1| predicted protein [Populus trichocarpa]
Length = 571
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 222/579 (38%), Positives = 339/579 (58%), Gaps = 46/579 (7%)
Query: 35 KNVVSW-----TVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGRE 89
K V W +L + + +D A +FD+M + VV T+++ Y ++G DE
Sbjct: 26 KACVHWKTTFCNTLLDMYAKCGVLDGAILVFDLMSVRTVVTWTSLIAAYAREGLSDEAIR 85
Query: 90 IFDEMPKK----NVISWTTMISGYVNN----NRIDVARKLFEVMPEKNEVSWTAMLMGYT 141
+F EM ++ ++ + TT++ N N DV + E + N A++ Y
Sbjct: 86 LFHEMDREGVSPDIFTITTVLHACACNGSLENGKDVHNYIRENDMQSNIFVCNALMDMYA 145
Query: 142 QCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKV 201
+CG ++DA +F MP+K +++ N+MI G +N +A +F
Sbjct: 146 KCGSMEDANSVFLEMPVKDIISWNTMIGGYSKNSLPNEALSLFG---------------- 189
Query: 202 YERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVD 261
D+ M+ +G +L +L CASLASLD G++VH ++R F D
Sbjct: 190 -----------DMVLEMKPDGT-----TLACILPACASLASLDRGKEVHGHILRNGFFSD 233
Query: 262 VYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFS 321
VA+ L+ MY+KCG V +L+FD +KD++ W +I+GY +G G ++ F+EM
Sbjct: 234 QQVANALVDMYVKCGVPVLARLLFDMIPTKDLITWTVMIAGYGMHGFGNNAITTFNEMRQ 293
Query: 322 SGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVE 381
+G+ PD+V+ + +L ACS++G + EG F M+ + V+PK EHYAC+VDLL R+G++
Sbjct: 294 AGIEPDEVSFISILYACSHSGLLDEGWRFFNVMQDECNVKPKLEHYACIVDLLARSGKLA 353
Query: 382 DAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYA 441
A K I++MP EPDA IWG+LL CR H + LAE A+ + +LEP+N G Y+LL+N YA
Sbjct: 354 MAYKFIKSMPIEPDATIWGALLSGCRIHHDVKLAEKVAEHVFELEPENTGYYVLLANTYA 413
Query: 442 SQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIG 501
++ +V +LR+ + +R + K PGCSWIEV+ KVH+F + SHP+ I +L+++
Sbjct: 414 EAEKWEEVKKLRQKIGRRGLKKNPGCSWIEVKSKVHIFLAGN-SSHPQAKKIEVLLKRLR 472
Query: 502 GLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCG 561
++E GY P + + L + D +K +L HSEKLA+A+G++ LP IRV KNLRVCG
Sbjct: 473 SKMKEEGYFPKTRYALINADSLQKETALCGHSEKLAMAFGILNLPPARTIRVSKNLRVCG 532
Query: 562 DCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
DCH K ISK +GREI+LRD+NRFHHFKDG+C CR +W
Sbjct: 533 DCHEMAKFISKTLGREIVLRDSNRFHHFKDGVCCCRGFW 571
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 98/178 (55%), Gaps = 6/178 (3%)
Query: 230 LISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFA 289
++S+L CA+ + GR VH V+ + L+ MY KCG L L+FD +
Sbjct: 1 MVSILQACANCGDVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFDLMS 60
Query: 290 SKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGRE 349
+ +V W S+I+ YA+ GL ++++++FHEM GV PD T+ VL AC+ G ++ G++
Sbjct: 61 VRTVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGKD 120
Query: 350 IFESMKSKYLVEPKTEHYAC--MVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
+ ++ + ++ + C ++D+ + G +EDA + MP + D I W +++G
Sbjct: 121 VHNYIREN---DMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVK-DIISWNTMIGG 174
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 144/321 (44%), Gaps = 21/321 (6%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEK----NVVSWTVMLGGFIRDSRIDDA 56
M R VV+WT+++ Y EG+ EA LF +M + ++ + T +L + +++
Sbjct: 59 MSVRTVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENG 118
Query: 57 RRLFDMMPEKDVVAQTNMVLG------YCQDGRVDEGREIFDEMPKKNVISWTTMISGYV 110
+ + + + E D+ Q+N+ + Y + G +++ +F EMP K++ISW TMI GY
Sbjct: 119 KDVHNYIRENDM--QSNIFVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYS 176
Query: 111 NNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDA-------WELFKAMPMKSVVA 163
N+ + A LF M + + T + C + + +
Sbjct: 177 KNSLPNEALSLFGDMVLEMKPDGTTLACILPACASLASLDRGKEVHGHILRNGFFSDQQV 236
Query: 164 SNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGV 223
+N+++ + G AR++FD + KD TW+ MI Y G+ I F M++ G+
Sbjct: 237 ANALVDMYVKCGVPVLARLLFDMIPTKDLITWTVMIAGYGMHGFGNNAITTFNEMRQAGI 296
Query: 224 RVNFPSLISVLSVCASLASLDHG-RQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKG- 281
+ S IS+L C+ LD G R + C + + ++ + + G+L
Sbjct: 297 EPDEVSFISILYACSHSGLLDEGWRFFNVMQDECNVKPKLEHYACIVDLLARSGKLAMAY 356
Query: 282 KLIFDNFASKDIVMWNSIISG 302
K I D +W +++SG
Sbjct: 357 KFIKSMPIEPDATIWGALLSG 377
>gi|357521733|ref|XP_003631155.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525177|gb|AET05631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 785
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 228/641 (35%), Positives = 354/641 (55%), Gaps = 51/641 (7%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMP--EKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKD 67
TA++ Y + G + +A TLF + ++++V+W M+ F + M +
Sbjct: 146 TALLHMYAKCGHLYQAQTLFNSISHQDRDIVAWNAMIAAFSFHALHAQTIHSVAQMQQAG 205
Query: 68 VVAQTNMVLGYC----QDGRVDEGREIFDEMPKK----NVISWTTMISGYVNNNRIDVAR 119
V ++ ++ Q + +G+ I + NV+ T ++ Y + + AR
Sbjct: 206 VTPNSSTLVSILPTIGQANALHQGKAIHAYYIRNFFFDNVVLQTALLDMYAKCHLLFYAR 265
Query: 120 KLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAM-------PMKSVVAS-------- 164
K+F + +KN+V W+AM+ GY I DA L+ M P + +A+
Sbjct: 266 KIFNTVNKKNDVCWSAMIGGYVLHDSISDALALYDDMLCIYGLNPTPATLATMLRACAQL 325
Query: 165 -------------------------NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMI 199
NS+I + G + A D+M KD ++S +I
Sbjct: 326 TDLKRGKKLHCHMIKSGMDLDTTVGNSLISMYAKCGIMDNAVGFLDEMIAKDTVSYSAII 385
Query: 200 KVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFD 259
+ GY + + +F MQ G+ ++I++L C+ LA+L HG H V F
Sbjct: 386 SGCVQNGYAEKALLIFRQMQSSGIAPYLETMIALLPACSHLAALQHGTCCHGYTVVRGFT 445
Query: 260 VDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEM 319
D + + +I MY KCG++ + IFD ++DI+ WN++I GY +GL ++L +F E+
Sbjct: 446 NDTSICNAIIDMYSKCGKITISREIFDRMQNRDIISWNTMIIGYGIHGLCVEALSLFQEL 505
Query: 320 FSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQ 379
+ G+ PDDVTL+ VLSACS++G V EG+ F SM + ++P+ HY CMVDLL RAG
Sbjct: 506 QALGLKPDDVTLIAVLSACSHSGLVTEGKYWFSSMSQNFNIKPRMAHYICMVDLLARAGN 565
Query: 380 VEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNI 439
+++A I+ MPF P+ IWG+LL ACRTH +++ E +KK+ L P+ G ++L+SNI
Sbjct: 566 LDEAYTFIQRMPFVPNVRIWGALLAACRTHKNIEMGEQVSKKIQLLGPEGTGNFVLMSNI 625
Query: 440 YASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEK 499
Y+S GR+ D A +R R K PGCSW+E+ +H+F G SHP+ I + L++
Sbjct: 626 YSSVGRWDDAAYIRSIQRHHGYKKSPGCSWVEISGVIHVFIGGH-QSHPQSASINKKLQE 684
Query: 500 IGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRV 559
+ +++ GY DSSFVLHDV+EEEK L YHSEK+A+A+G++ I V KNLR+
Sbjct: 685 LLVQMKKLGYRADSSFVLHDVEEEEKEQILLYHSEKVAIAFGILNTSPSSRILVTKNLRI 744
Query: 560 CGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
C DCHSAIK I+ + REI +RDA+RFHHFKDG+C+C+D+W
Sbjct: 745 CVDCHSAIKFITLLTEREITVRDASRFHHFKDGICNCQDFW 785
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/382 (21%), Positives = 172/382 (45%), Gaps = 28/382 (7%)
Query: 70 AQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKN 129
A T + + + R +FD++PK +V+ W MI Y + + L+ M +
Sbjct: 43 AATQLARYHISRNEIQLARHVFDQIPKPSVVLWNMMIRTYAWSGPFQQSIYLYLHMLQLG 102
Query: 130 EVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQN--------------G 175
V+ T + + A +A+ + ++ +++ ILGL + G
Sbjct: 103 -VTPTNFTFPF-----LLKACSSLQALQLGRLIHTHAHILGLSMDLYVSTALLHMYAKCG 156
Query: 176 EVQKARVVFDQM--REKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISV 233
+ +A+ +F+ + +++D W+ MI + + I MQ+ GV N +L+S+
Sbjct: 157 HLYQAQTLFNSISHQDRDIVAWNAMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSI 216
Query: 234 LSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDI 293
L +L G+ +HA +R F +V + + L+ MY KC L + IF+ K+
Sbjct: 217 LPTIGQANALHQGKAIHAYYIRNFFFDNVVLQTALLDMYAKCHLLFYARKIFNTVNKKND 276
Query: 294 VMWNSIISGYAQYGLGEKSLKVFHEMFS-SGVMPDDVTLVGVLSACSYTGKVKEGREIFE 352
V W+++I GY + +L ++ +M G+ P TL +L AC+ +K G+++
Sbjct: 277 VCWSAMIGGYVLHDSISDALALYDDMLCIYGLNPTPATLATMLRACAQLTDLKRGKKLHC 336
Query: 353 SMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKL 412
M K ++ T ++ + + G +++A+ ++ M D + + +++ C ++
Sbjct: 337 HMI-KSGMDLDTTVGNSLISMYAKCGIMDNAVGFLDEM-IAKDTVSYSAIISGC---VQN 391
Query: 413 DLAEVAAKKLLQLEPKNAGPYI 434
AE A Q++ PY+
Sbjct: 392 GYAEKALLIFRQMQSSGIAPYL 413
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 130/293 (44%), Gaps = 52/293 (17%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMM- 63
NVV TA++ Y + ++ A +F + +KN V W+ M+GG++ I DA L+D M
Sbjct: 244 NVVLQTALLDMYAKCHLLFYARKIFNTVNKKNDVCWSAMIGGYVLHDSISDALALYDDML 303
Query: 64 ------PEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTT----MISGYVNNN 113
P +A M+ Q + G+++ M K + TT +IS Y
Sbjct: 304 CIYGLNPTPATLA--TMLRACAQLTDLKRGKKLHCHMIKSGMDLDTTVGNSLISMYAKCG 361
Query: 114 RIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAM----------------P 157
+D A + M K+ VS++A++ G Q G + A +F+ M P
Sbjct: 362 IMDNAVGFLDEMIAKDTVSYSAIISGCVQNGYAEKALLIFRQMQSSGIAPYLETMIALLP 421
Query: 158 MKSVVAS-----------------------NSMILGLGQNGEVQKARVVFDQMREKDDAT 194
S +A+ N++I + G++ +R +FD+M+ +D +
Sbjct: 422 ACSHLAALQHGTCCHGYTVVRGFTNDTSICNAIIDMYSKCGKITISREIFDRMQNRDIIS 481
Query: 195 WSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGR 247
W+ MI Y G +E + LF +Q G++ + +LI+VLS C+ + G+
Sbjct: 482 WNTMIIGYGIHGLCVEALSLFQELQALGLKPDDVTLIAVLSACSHSGLVTEGK 534
>gi|224137432|ref|XP_002322556.1| predicted protein [Populus trichocarpa]
gi|222867186|gb|EEF04317.1| predicted protein [Populus trichocarpa]
Length = 702
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 209/510 (40%), Positives = 315/510 (61%), Gaps = 2/510 (0%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMP 64
NVVSW M+ G+ G I E+ LF QMP +N+VSW M+ +++ ID+A RLF+ MP
Sbjct: 194 NVVSWVTMLSGFARNGNILESRRLFDQMPSRNIVSWNAMISAYVQRCEIDEASRLFEEMP 253
Query: 65 EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEV 124
E+D V+ T M+ GY + G++DE RE+ +EMP +N+ + T MISGY+ N++D AR+ F+
Sbjct: 254 ERDSVSWTTMINGYVRIGKLDEARELLNEMPYRNIGAQTAMISGYIQCNKVDEARRFFDE 313
Query: 125 MPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVF 184
+ + V W AM+ GY GRI +A L K M K +V N+MI Q G++ +A +F
Sbjct: 314 IGTWDVVCWNAMIAGYAHHGRINEALCLSKRMVNKDMVTWNTMISCYAQVGQMDRAVKIF 373
Query: 185 DQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLD 244
++M E+D +W+ +I + G L+ + F LM EG + + S LS CA++A+L
Sbjct: 374 EEMGERDLVSWNSLIAGFMLNGQNLDALKSFALMGHEGKKPDQLSFACGLSSCATIAALQ 433
Query: 245 HGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYA 304
G Q+H +V+ + + V + LITMY KCG +++ L+F+ D++ WNS+I GYA
Sbjct: 434 VGNQLHQVVVKGGYLNYLVVNNALITMYAKCGRILEAGLVFNGICHADVISWNSLIGGYA 493
Query: 305 QYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKT 364
G G+++LK+F EM S G+ PD+VT +G+LSAC++ G V G ++F+ M Y +EP
Sbjct: 494 INGYGKEALKLFEEMASEGMAPDEVTFIGILSACNHAGMVDHGLKLFKCMSKVYAIEPLA 553
Query: 365 EHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQ 424
EHYACMVDLLGR G++++A +++ M + A +WG+LLGACR H L+L +AA KL +
Sbjct: 554 EHYACMVDLLGRVGRLDEAFEIVRGMKVKATAGVWGALLGACRAHGNLELGRLAAHKLSE 613
Query: 425 LEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDC 484
EP Y+LLSNI+A R+++V E+R M + +K PGCSW+EV +VH F D
Sbjct: 614 FEPHKTSNYVLLSNIHAEANRWNEVQEVRMLMNASSTVKEPGCSWVEVRNQVHGFLSDD- 672
Query: 485 VSHPEHPMIMRMLEKIGGLLREAGYCPDSS 514
S P I L + +R A + + S
Sbjct: 673 -STRSRPDIGVTLASLNSHIRNAFHISEVS 701
Score = 214 bits (546), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 141/488 (28%), Positives = 247/488 (50%), Gaps = 65/488 (13%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
M E+N V++ +M+ Y + G I A LF +MP +N+VSW M+ G++ + + D+A +LF
Sbjct: 1 MAEKNTVTYNSMISVYAKNGRINAARNLFDKMPRRNLVSWNTMVSGYLHNGKFDEAYKLF 60
Query: 61 DMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMP---KKNVISWTTMISGYVNNNRIDV 117
+MP +D+ + T M+ Y ++G V++ RE+FD +P +K V W MISGYV R++
Sbjct: 61 VIMPRRDLFSWTLMITCYTRNGEVEKARELFDSLPCSYRKGVACWNAMISGYVKKGRVNE 120
Query: 118 ARKLFEVMPEKNEVSWTAMLMGYT-------------------------------QCGRI 146
A++LF+ MP KN +SW +ML GYT Q G +
Sbjct: 121 AKRLFDEMPVKNLISWNSMLAGYTQNRKMRLGLEFFNEMDERDVVSWNLMVDGFIQVGDL 180
Query: 147 QDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKG 206
AW+ F+ +VV+ +M+ G +NG + ++R +FDQM ++ +W+ MI Y ++
Sbjct: 181 DSAWKFFQETQKPNVVSWVTMLSGFARNGNILESRRLFDQMPSRNIVSWNAMISAYVQRC 240
Query: 207 YELEVIDLFTLM-QKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVA 265
E LF M +++ V S ++++ + LD R++ ++ ++
Sbjct: 241 EIDEASRLFEEMPERDSV-----SWTTMINGYVRIGKLDEARELLNEMPY----RNIGAQ 291
Query: 266 SVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVM 325
+ +I+ YI+C ++ + + FD + D+V WN++I+GYA +G ++L + M V
Sbjct: 292 TAMISGYIQCNKVDEARRFFDEIGTWDVVCWNAMIAGYAHHGRINEALCLSKRM----VN 347
Query: 326 PDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMK 385
D VT ++S + G++ +IFE M + LV + M++ GQ DA+K
Sbjct: 348 KDMVTWNTMISCYAQVGQMDRAVKIFEEMGERDLVSWNSLIAGFMLN-----GQNLDALK 402
Query: 386 LIEAMPFE---PDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAG-PYILLSN--- 438
M E PD + + L +C T L + +L Q+ K Y++++N
Sbjct: 403 SFALMGHEGKKPDQLSFACGLSSCATIAALQV----GNQLHQVVVKGGYLNYLVVNNALI 458
Query: 439 -IYASQGR 445
+YA GR
Sbjct: 459 TMYAKCGR 466
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 101/403 (25%), Positives = 208/403 (51%), Gaps = 24/403 (5%)
Query: 63 MPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLF 122
M EK+ V +M+ Y ++GR++ R +FD+MP++N++SW TM+SGY++N + D A KLF
Sbjct: 1 MAEKNTVTYNSMISVYAKNGRINAARNLFDKMPRRNLVSWNTMVSGYLHNGKFDEAYKLF 60
Query: 123 EVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPM---KSVVASNSMILGLGQNGEVQK 179
+MP ++ SWT M+ YT+ G ++ A ELF ++P K V N+MI G + G V +
Sbjct: 61 VIMPRRDLFSWTLMITCYTRNGEVEKARELFDSLPCSYRKGVACWNAMISGYVKKGRVNE 120
Query: 180 ARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCAS 239
A+ +FD+M K+ +W+ M+ Y + ++ F M + V V++ ++
Sbjct: 121 AKRLFDEMPVKNLISWNSMLAGYTQNRKMRLGLEFFNEMDERDV-VSWNLMVDGF---IQ 176
Query: 240 LASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSI 299
+ LD + + + +V +++ + + G +++ + +FD S++IV WN++
Sbjct: 177 VGDLDSAWKFFQETQK----PNVVSWVTMLSGFARNGNILESRRLFDQMPSRNIVSWNAM 232
Query: 300 ISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYL 359
IS Y Q +++ ++F EM D V+ +++ GK+ E RE+ M + +
Sbjct: 233 ISAYVQRCEIDEASRLFEEMPER----DSVSWTTMINGYVRIGKLDEARELLNEMPYRNI 288
Query: 360 VEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAA 419
M+ + +V++A + + + D + W +++ H +++ A +
Sbjct: 289 GAQTA-----MISGYIQCNKVDEARRFFDEIG-TWDVVCWNAMIAGYAHHGRINEALCLS 342
Query: 420 KKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVI 462
K+++ K+ + + + YA G+ ++ + M +R+++
Sbjct: 343 KRMVN---KDMVTWNTMISCYAQVGQMDRAVKIFEEMGERDLV 382
>gi|347954522|gb|AEP33761.1| organelle transcript processing 82, partial [Crucihimalaya
wallichii]
Length = 710
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 240/650 (36%), Positives = 375/650 (57%), Gaps = 52/650 (8%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPE----KNVVSWTVMLGGFIRDSRIDDA 56
+ E N++ W M RG+ A L+ M N ++ +L + +
Sbjct: 63 IQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREG 122
Query: 57 RRL----FDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+++ + + D+ T+++ Y Q+GR+++ R++FD+ ++V+S+T +I+GY +
Sbjct: 123 QQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASK 182
Query: 113 NRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAM----------PMKSVV 162
I A+K+F+ +P K+ VSW AM+ GY + G ++A ELFK M M SVV
Sbjct: 183 GYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVV 242
Query: 163 A----SNSMILG-----------LGQN--------------GEVQKARVVFDQMREKDDA 193
+ S S+ LG G N GEV+ A +F+ + KD
Sbjct: 243 SACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVI 302
Query: 194 TWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQL 253
+W+ +I Y E + LF M + G N +++S+L CA L +++ GR +H +
Sbjct: 303 SWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYI 362
Query: 254 ---VRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGE 310
++ + + S LI MY KCG++ + +FD+ ++ + WN++I G+A +G
Sbjct: 363 NKRLKGVANASSHRTS-LIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRAN 421
Query: 311 KSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACM 370
+ +F M + + PDD+T VG+LSACS++G + GR IF SMK Y + PK EHY CM
Sbjct: 422 AAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHYGCM 481
Query: 371 VDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNA 430
+DLLG +G ++A ++I M EPD +IW SLL AC+ + ++L E A+ L+++EPKN
Sbjct: 482 IDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMYANVELGESYAQNLIKIEPKNP 541
Query: 431 GPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEH 490
G Y+LLSNIYA+ GR+++VA++R + + + K PGCS IE++ VH F D HP +
Sbjct: 542 GSYVLLSNIYATAGRWNEVAKIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKF-HPRN 600
Query: 491 PMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVP 550
I MLE++ LL EAG+ PD+S VL +++EE K +LR+HSEKLA+A+GL+ G
Sbjct: 601 REIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTK 660
Query: 551 IRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
+ ++KNLRVC +CH A KLISK+ REII RD RFHHF+DG+CSC DYW
Sbjct: 661 LTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 710
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 132/261 (50%), Gaps = 34/261 (13%)
Query: 183 VFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLAS 242
VF+ ++E + W+ M + + + + L+ M G+ N + +L CA +
Sbjct: 59 VFETIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKA 118
Query: 243 LDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDN--------------- 287
G+Q+H +++ +D+D+YV + LI+MY++ G L + +FD
Sbjct: 119 FREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITG 178
Query: 288 FAS----------------KDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTL 331
+AS KD+V WN++ISGYA+ G +++L++F EM + V PD+ T+
Sbjct: 179 YASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTM 238
Query: 332 VGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMP 391
V V+SAC+ + ++ GR++ S + + ++DL + G+VE A L E +
Sbjct: 239 VSVVSACAQSASIELGRQV-HSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLS 297
Query: 392 FEPDAIIWGSLLGACRTHMKL 412
++ D I W +L+G THM L
Sbjct: 298 YK-DVISWNTLIGG-YTHMNL 316
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 118/252 (46%), Gaps = 17/252 (6%)
Query: 226 NFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGE---LVKGK 282
N PSL S+L C +L SL R +HAQ+++ Y S LI + L
Sbjct: 2 NHPSL-SLLHNCKTLQSL---RMIHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAI 57
Query: 283 LIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTG 342
+F+ ++++WN++ G+A +L ++ M S G++P+ T +L +C+ +
Sbjct: 58 SVFETIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSK 117
Query: 343 KVKEGREIF-ESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGS 401
+EG++I +K Y ++ + ++ + + G++EDA K+ + D + + +
Sbjct: 118 AFREGQQIHGHVLKLGYDLDLYV--HTSLISMYVQNGRLEDARKVFDQSSHR-DVVSYTA 174
Query: 402 LLGACRTHMKLDLAEVAAKKLLQLEP-KNAGPYILLSNIYASQGRFHDVAELRKNMRKRN 460
L+ + + +A+K+ P K+ + + + YA G + EL K M K N
Sbjct: 175 LITGYASKGYI----ASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTN 230
Query: 461 VIKPPGCSWIEV 472
V +P + + V
Sbjct: 231 V-RPDESTMVSV 241
>gi|147845321|emb|CAN83351.1| hypothetical protein VITISV_028907 [Vitis vinifera]
Length = 948
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 225/616 (36%), Positives = 364/616 (59%), Gaps = 19/616 (3%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM-----PEKNVVSWTVMLGGFIRDSRIDD 55
M R+ VSW M+ GY + G+ E+ LF +M P+ ++ + G + D ++
Sbjct: 336 MVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVNQFKPDLLTITSILQACGHLGD--LEF 393
Query: 56 ARRLFDMMP----EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVN 111
+ + D M E D A ++ Y + G + +E+F M K+ +SW +MI+ Y+
Sbjct: 394 GKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQ 453
Query: 112 NNRIDVARKLFEVMP---EKNEVSWTAMLMGYTQCGRIQDAWEL---FKAMPMKS-VVAS 164
N D A KLF++M + + V++ +L TQ G + EL M S +V S
Sbjct: 454 NGSFDEAMKLFKMMKTDVKPDSVTYVMLLSMSTQLGDLXLGKELHCDLAKMGFNSNIVVS 513
Query: 165 NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVR 224
N+++ + GE+ + VF+ M+ +D TW+ +I + + + M+ EGV
Sbjct: 514 NTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVT 573
Query: 225 VNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLI 284
+ +++S+L VC+ LA+ G+++H + + + DV V +VLI MY KCG L +
Sbjct: 574 PDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQV 633
Query: 285 FDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKV 344
F +KD+V W ++IS YG G+K+++ F EM ++G++PD V V ++ ACS++G V
Sbjct: 634 FKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSGLV 693
Query: 345 KEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLG 404
+EG F MK Y +EP+ EHYAC+VDLL R+ ++ A I +MP +PD+ IWG+LL
Sbjct: 694 EEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSMPLKPDSSIWGALLS 753
Query: 405 ACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKP 464
ACR ++A+ ++++++L P + G Y+L+SN+YA+ G++ V +RK+++ R + K
Sbjct: 754 ACRMSGDTEIAQRVSERIIELNPDDTGYYVLVSNVYAALGKWDQVRSIRKSIKARGLKKD 813
Query: 465 PGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEE 524
PGCSW+E++ KV++F G + + ++L + GL+ + GY + FVLHD+DE+E
Sbjct: 814 PGCSWMEIQNKVYVF-GTGTKFSEQFEEVNKLLGMLAGLMAKEGYIANLQFVLHDIDEDE 872
Query: 525 KVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDAN 584
K L HSE+LA+A+GL+ G P++VMKNLRVC DCH+ K ISK+ RE+++RDAN
Sbjct: 873 KRDILCGHSERLAIAFGLLNTKPGTPLQVMKNLRVCEDCHTVTKYISKIXQRELLVRDAN 932
Query: 585 RFHHFKDGLCSCRDYW 600
RFH FKDG CSC DYW
Sbjct: 933 RFHVFKDGACSCGDYW 948
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 109/421 (25%), Positives = 208/421 (49%), Gaps = 18/421 (4%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRD----SRIDDA 56
MP R+VVSW +++ GY G EA ++++ VV + + +R +++
Sbjct: 235 MPLRDVVSWNSLISGYNANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEG 294
Query: 57 RRLFDMMPE----KDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+ ++ + KDV+ ++ YC+ + +GR IFD+M ++ +SW TMI GY
Sbjct: 295 DIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQV 354
Query: 113 NRIDVARKLFEVMPEK---NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKS----VVASN 165
+ + KLF M + + ++ T++L G ++ + M ASN
Sbjct: 355 GLYEESIKLFMEMVNQFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASN 414
Query: 166 SMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRV 225
+I + G + ++ VF M+ KD +W+ MI VY + G E + LF +M K V+
Sbjct: 415 ILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGSFDEAMKLFKMM-KTDVKP 473
Query: 226 NFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIF 285
+ + + +LS+ L L G+++H L + F+ ++ V++ L+ MY KCGE+ +F
Sbjct: 474 DSVTYVMLLSMSTQLGDLXLGKELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVF 533
Query: 286 DNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVK 345
+N ++DI+ WN+II+ L++ M + GV PD T++ +L CS +
Sbjct: 534 ENMKARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKR 593
Query: 346 EGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
+G+EI + K +E ++++ + G + ++ ++ + M D + W +L+ A
Sbjct: 594 QGKEIHGCI-FKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMK-TKDVVTWTALISA 651
Query: 406 C 406
C
Sbjct: 652 C 652
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 116/426 (27%), Positives = 214/426 (50%), Gaps = 30/426 (7%)
Query: 2 PERNVVSWTAMVRGYVEEGMITEAGTLFWQM------PEK----NVVSWTVMLGGFIRDS 51
P NV W +++R G+ +EA +L+ + P+ +V++ L F
Sbjct: 135 PSNNVYXWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAK 194
Query: 52 RIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVN 111
I D R+ M D+ ++ YC+ +D+ R++F+EMP ++V+SW ++ISGY
Sbjct: 195 SIHD--RVLXMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNA 252
Query: 112 NNRIDVARKLFE------VMPEKNEVSWTAMLMGYTQCGRIQDA---WELFKAMPMKSVV 162
N + A +++ V+P+ +S ++L G +++ L + + +K V
Sbjct: 253 NGYWNEALEIYYRFRNLGVVPDSYTMS--SVLRACGGLGSVEEGDIIHGLIEKIGIKKDV 310
Query: 163 ASNSMILGL--GQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQK 220
N+ +L + NG + R +FD+M +D +W+ MI Y + G E I LF M
Sbjct: 311 IVNNGLLSMYCKFNGLID-GRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVN 369
Query: 221 EGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVK 280
+ + + ++ S+L C L L+ G+ VH ++ ++ D +++LI MY KCG L+
Sbjct: 370 Q-FKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLA 428
Query: 281 GKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSY 340
+ +F KD V WNS+I+ Y Q G ++++K+F +M + V PD VT V +LS +
Sbjct: 429 SQEVFSGMKCKDSVSWNSMINVYIQNGSFDEAMKLF-KMMKTDVKPDSVTYVMLLSMSTQ 487
Query: 341 TGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWG 400
G + G+E+ + +K +VD+ + G++ D++K+ E M D I W
Sbjct: 488 LGDLXLGKELHCDL-AKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMK-ARDIITWN 545
Query: 401 SLLGAC 406
+++ +C
Sbjct: 546 TIIASC 551
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 118/479 (24%), Positives = 211/479 (44%), Gaps = 89/479 (18%)
Query: 95 PKKNVISWTTMISGYVNNNRIDVARKLFE------VMPEK----NEVSWTAMLMGYTQCG 144
P NV W ++I +N A L+ + P+ + ++ A L+ +
Sbjct: 135 PSNNVYXWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAK 194
Query: 145 RIQDAWELFKAMPM---KSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKV 201
I D + + M + N++I + ++ KAR VF++M +D +W+ +I
Sbjct: 195 SIHD-----RVLXMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISG 249
Query: 202 YERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVD 261
Y GY E ++++ + GV + ++ SVL C L S++ G +H + + D
Sbjct: 250 YNANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKD 309
Query: 262 VYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFS 321
V V + L++MY K L+ G+ IFD +D V WN++I GY+Q GL E+S+K+F EM +
Sbjct: 310 VIVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVN 369
Query: 322 SGVMPDDVTLVGVLSACSYTGKVKEGR--------------------------------- 348
PD +T+ +L AC + G ++ G+
Sbjct: 370 Q-FKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLA 428
Query: 349 --EIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMP--FEPDAIIWGSLLG 404
E+F MK K V + M+++ + G ++AMKL + M +PD++ + LL
Sbjct: 429 SQEVFSGMKCKDSVS-----WNSMINVYIQNGSFDEAMKLFKMMKTDVKPDSVTYVMLLS 483
Query: 405 ACRTHMKLDLAEVAAKKLLQLEPKNAG--PYILLSN----IYASQGRFHDVAELRKNMRK 458
M L ++ K L + G I++SN +YA G D ++ +NM+
Sbjct: 484 -----MSTQLGDLXLGKELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKA 538
Query: 459 RNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVL 517
R++I +W + CV + + +RM+ + +R G PD + +L
Sbjct: 539 RDII-----TWNTIIAS--------CVHSEDCNLGLRMISR----MRTEGVTPDMATML 580
>gi|357118480|ref|XP_003560982.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Brachypodium distachyon]
Length = 796
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 241/644 (37%), Positives = 356/644 (55%), Gaps = 62/644 (9%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGG---------FIR----DSRIDDA 56
+A+ + Y +A +F +P + V W +L G F+R S D+
Sbjct: 162 SALAKLYFTLSRGNDARKVFDAVPSPDTVLWNTLLAGLSGSEALEAFVRMAGAGSVRPDS 221
Query: 57 RRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRID 116
L ++P VA T M G C V E ++V+ T +IS Y ++
Sbjct: 222 TTLASVLPAAAEVANTTM--GRC----VHAFGEKCGLAQHEHVV--TGLISLYAKCGDME 273
Query: 117 VARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAM-------------------- 156
AR LF+ M + V++ A++ GY+ G + + ELFK +
Sbjct: 274 CARHLFDRMEGPDLVTYNALISGYSINGMVGSSVELFKELVGMGLRPSSSTLVALIPVHS 333
Query: 157 -----PMKSVVASNSMILGLGQNGEVQ--------------KARVVFDQMREKDDATWSG 197
P+ + ++ + GL N V AR FD M EK +W+
Sbjct: 334 PFGHEPLAGCLHAHVVKAGLDANAPVSTALTTLYCRFNDMDSARRAFDAMPEKTMESWNA 393
Query: 198 MIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQ 257
MI Y + G + LF MQ VR N ++ S LS CA L +L G+ VH + +
Sbjct: 394 MISGYAQNGLTEMAVALFQQMQALNVRPNPLTISSALSACAQLGALSLGKWVHKIIANEK 453
Query: 258 FDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFH 317
+++VYV + LI MY+KCG + + + IFD+ +K++V WN +ISGY +G G ++LK++
Sbjct: 454 LELNVYVMTALIDMYVKCGSIAEARCIFDSMDNKNVVSWNVMISGYGLHGQGAEALKLYK 513
Query: 318 EMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRA 377
+M + + P T + VL ACS+ G VKEG +F SM S Y + P EH CMVDLLGRA
Sbjct: 514 DMMDAHLHPTSSTFLSVLYACSHGGLVKEGTTVFRSMTSDYGITPGIEHCTCMVDLLGRA 573
Query: 378 GQVEDAMKLIEAMPFEP-DAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILL 436
GQ+++A +LI P IWG+LLGAC H DLA++A++KL +LEP+N G Y+LL
Sbjct: 574 GQLKEAFELISEFPKSAVGPGIWGALLGACMVHKDGDLAKLASQKLFELEPENTGYYVLL 633
Query: 437 SNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRM 496
SN+Y S+ ++ + A +R+ + R ++K PGC+ IE+ + H+F D +HP+ I
Sbjct: 634 SNLYTSKKQYSEAAVVRQEAKSRKLVKTPGCTLIEIGDRPHVFMAGD-RAHPQSDAIYLY 692
Query: 497 LEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKN 556
LEK+ + EAGY PD+ L+DV+EEEK H ++ HSEKLA+A+GL+ G IR++KN
Sbjct: 693 LEKLTAKMIEAGYRPDTEAALYDVEEEEKEHMVKVHSEKLAIAFGLLNTEPGTEIRIIKN 752
Query: 557 LRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
LRVC DCH+A K+ISKV R I++RDA+RFHHF+DG+CSC DYW
Sbjct: 753 LRVCLDCHNATKIISKVTQRLIVVRDASRFHHFRDGVCSCGDYW 796
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 94/199 (47%), Gaps = 21/199 (10%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV----------VSWTVMLGGFIRD 50
MPE+ + SW AM+ GY + G+ A LF QM NV +S LG
Sbjct: 383 MPEKTMESWNAMISGYAQNGLTEMAVALFQQMQALNVRPNPLTISSALSACAQLGALSLG 442
Query: 51 SRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYV 110
+ + + + E +V T ++ Y + G + E R IFD M KNV+SW MISGY
Sbjct: 443 KWVH--KIIANEKLELNVYVMTALIDMYVKCGSIAEARCIFDSMDNKNVVSWNVMISGYG 500
Query: 111 NNNRIDVARKLFEVMPEKN----EVSWTAMLMGYTQCGRIQDAWELFKAMP-----MKSV 161
+ + A KL++ M + + ++ ++L + G +++ +F++M +
Sbjct: 501 LHGQGAEALKLYKDMMDAHLHPTSSTFLSVLYACSHGGLVKEGTTVFRSMTSDYGITPGI 560
Query: 162 VASNSMILGLGQNGEVQKA 180
M+ LG+ G++++A
Sbjct: 561 EHCTCMVDLLGRAGQLKEA 579
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 74/159 (46%), Gaps = 9/159 (5%)
Query: 247 RQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQY 306
R +HA V F D +VAS L +Y + +FD S D V+WN++++G +
Sbjct: 143 RPLHALAVASGFAADNFVASALAKLYFTLSRGNDARKVFDAVPSPDTVLWNTLLAGLS-- 200
Query: 307 GLGEKSLKVFHEMFSSG-VMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTE 365
G ++L+ F M +G V PD TL VL A + GR + + L + E
Sbjct: 201 --GSEALEAFVRMAGAGSVRPDSTTLASVLPAAAEVANTTMGRCVHAFGEKCGLAQ--HE 256
Query: 366 HYAC-MVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
H ++ L + G +E A L + M PD + + +L+
Sbjct: 257 HVVTGLISLYAKCGDMECARHLFDRME-GPDLVTYNALI 294
>gi|357480925|ref|XP_003610748.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512083|gb|AES93706.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 828
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 232/647 (35%), Positives = 370/647 (57%), Gaps = 48/647 (7%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPE----KNVVSWTVMLGGFIRDSRIDDA 56
M ERNVVSWT+++ GY M EA LF++M E N V+ + + ++
Sbjct: 183 MLERNVVSWTSLINGYSVVNMAKEAVCLFFEMVEVGVEPNPVTMVCAISACAKLKDLELG 242
Query: 57 RRLFDMMPEKDVVAQTNMVLG----YCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+++ ++M E V + T +V Y + G + REIFDE KN++ + T++S YV +
Sbjct: 243 KKVCNLMTELGVKSNTLVVNALLDMYMKCGDMYAVREIFDEFSDKNLVMYNTIMSNYVQH 302
Query: 113 --------------------------NRIDVARKLFEVMPEKNEVSW------------- 133
+ I +L ++ K+ ++
Sbjct: 303 GLAGEVLVVLDEMLQKGQRPDKVTMLSTIAACAQLGDLSVGKSSHAYVFRNGLERLDNIS 362
Query: 134 TAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDA 193
A++ Y +CG+ + A ++F +M K+VV NS+I GL ++GE++ A +F +M E +
Sbjct: 363 NAIIDMYMKCGKREAACKVFDSMSNKTVVTWNSLIAGLVRDGELELALRIFGEMPESNLV 422
Query: 194 TWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQL 253
+W+ MI + E IDL MQ +G++ + +++ + S C L +LD + ++ +
Sbjct: 423 SWNTMIGAMVQASMFEEAIDLLREMQNQGIKGDRVTMVGIASACGYLGALDLAKWIYTYI 482
Query: 254 VRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSL 313
+ +D+ + + L+ M+ +CG+ + +F+N +D+ W + I A G + ++
Sbjct: 483 EKNDIHIDMQLGTALVDMFSRCGDPLNAMRVFENMEKRDVSAWTAAIRVKAVEGNAKGAI 542
Query: 314 KVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDL 373
++F EM V DD V +L+A S+ G V +GR++F +M+ + V P+ HY CMVDL
Sbjct: 543 ELFDEMLKQDVKADDFVFVALLTAFSHGGYVDQGRQLFWAMEKIHGVSPQIVHYGCMVDL 602
Query: 374 LGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPY 433
LGRAG +E+A L+++MP +P+ +IWGS L ACR H ++ A A +K+ QL P+ G +
Sbjct: 603 LGRAGLLEEAFDLMKSMPIKPNDVIWGSFLAACRKHKNVEFANYADEKITQLAPEKVGIH 662
Query: 434 ILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMI 493
+LLSNIYAS G+++DVA +R M+++ K G S IEV + FT D SH E+ I
Sbjct: 663 VLLSNIYASAGKWNDVARVRLQMKEKGFQKVAGSSSIEVHGLIREFTSGD-ESHTENAQI 721
Query: 494 MRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRV 553
ML++I + + GY PD++ VL DVDE+EK H L HSEKLA+AYGL+ +G+PIRV
Sbjct: 722 GLMLQEINCRISQVGYVPDTTNVLVDVDEQEKEHLLSRHSEKLAMAYGLINTGKGIPIRV 781
Query: 554 MKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
+KNLR+C DCHS KL+SK+ GREI +RD NR+H FK+G CSCRD+W
Sbjct: 782 VKNLRMCSDCHSFAKLVSKLYGREITVRDNNRYHFFKEGFCSCRDFW 828
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 109/436 (25%), Positives = 208/436 (47%), Gaps = 59/436 (13%)
Query: 8 SWTAMVRGYVEEGMITEAGTLFWQM-------PEKNVVSWTVMLGGFIRDSRIDDARRLF 60
+ ++RGY G+ EA ++ M P+ ++ +L + + ++
Sbjct: 88 TCNTLIRGYAASGLCKEAIFIYLHMIIVMGIVPDN--FTFPFLLSACSKIMAFSEGVQVH 145
Query: 61 DMMPE----KDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRID 116
++ + KD+ +++ Y G+VD GR++FDEM ++NV+SWT++I+GY N
Sbjct: 146 GVVVKMGLVKDLFVANSLIHFYAACGKVDLGRKVFDEMLERNVVSWTSLINGYSVVNMAK 205
Query: 117 VARKLF----EVMPEKNEVSWTAMLMGYTQCGRIQD------AWELFKAMPMKS-VVASN 165
A LF EV E N V+ M+ + C +++D L + +KS + N
Sbjct: 206 EAVCLFFEMVEVGVEPNPVT---MVCAISACAKLKDLELGKKVCNLMTELGVKSNTLVVN 262
Query: 166 SMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRV 225
+++ + G++ R +FD+ +K+ ++ ++ Y + G EV+ + M ++G R
Sbjct: 263 ALLDMYMKCGDMYAVREIFDEFSDKNLVMYNTIMSNYVQHGLAGEVLVVLDEMLQKGQRP 322
Query: 226 NFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIF 285
+ +++S ++ CA L L G+ HA + R + +++ +I MY+KCG+ +F
Sbjct: 323 DKVTMLSTIAACAQLGDLSVGKSSHAYVFRNGLERLDNISNAIIDMYMKCGKREAACKVF 382
Query: 286 DNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSS----------------------- 322
D+ ++K +V WNS+I+G + G E +L++F EM S
Sbjct: 383 DSMSNKTVVTWNSLIAGLVRDGELELALRIFGEMPESNLVSWNTMIGAMVQASMFEEAID 442
Query: 323 --------GVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLL 374
G+ D VT+VG+ SAC Y G + + I+ ++ K + + +VD+
Sbjct: 443 LLREMQNQGIKGDRVTMVGIASACGYLGALDLAKWIYTYIE-KNDIHIDMQLGTALVDMF 501
Query: 375 GRAGQVEDAMKLIEAM 390
R G +AM++ E M
Sbjct: 502 SRCGDPLNAMRVFENM 517
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 133/262 (50%), Gaps = 10/262 (3%)
Query: 158 MKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTL 217
+K + +NS+I G+V R VFD+M E++ +W+ +I Y E + LF
Sbjct: 154 VKDLFVANSLIHFYAACGKVDLGRKVFDEMLERNVVSWTSLINGYSVVNMAKEAVCLFFE 213
Query: 218 MQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGE 277
M + GV N +++ +S CA L L+ G++V + + V + L+ MY+KCG+
Sbjct: 214 MVEVGVEPNPVTMVCAISACAKLKDLELGKKVCNLMTELGVKSNTLVVNALLDMYMKCGD 273
Query: 278 LVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSA 337
+ + IFD F+ K++VM+N+I+S Y Q+GL + L V EM G PD VT++ ++A
Sbjct: 274 MYAVREIFDEFSDKNLVMYNTIMSNYVQHGLAGEVLVVLDEMLQKGQRPDKVTMLSTIAA 333
Query: 338 CSYTGKVKEGREIFESMKSKYLVEPKTEHY----ACMVDLLGRAGQVEDAMKLIEAMPFE 393
C+ G + G+ Y+ E ++D+ + G+ E A K+ ++M
Sbjct: 334 CAQLGDLSVGKS-----SHAYVFRNGLERLDNISNAIIDMYMKCGKREAACKVFDSMS-N 387
Query: 394 PDAIIWGSLLGACRTHMKLDLA 415
+ W SL+ +L+LA
Sbjct: 388 KTVVTWNSLIAGLVRDGELELA 409
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 117/245 (47%), Gaps = 13/245 (5%)
Query: 143 CGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDA-----TWSG 197
C + + +L M K V N +I Q G + + +E + T +
Sbjct: 32 CKTLIELKQLHCNMLKKGVFNINKLIAACVQMGTHESLNYALNAFKEDEGTKCSLYTCNT 91
Query: 198 MIKVYERKGYELEVIDLF----TLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQL 253
+I+ Y G E I ++ +M FP L LS C+ + + G QVH +
Sbjct: 92 LIRGYAASGLCKEAIFIYLHMIIVMGIVPDNFTFPFL---LSACSKIMAFSEGVQVHGVV 148
Query: 254 VRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSL 313
V+ D++VA+ LI Y CG++ G+ +FD +++V W S+I+GY+ + ++++
Sbjct: 149 VKMGLVKDLFVANSLIHFYAACGKVDLGRKVFDEMLERNVVSWTSLINGYSVVNMAKEAV 208
Query: 314 KVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDL 373
+F EM GV P+ VT+V +SAC+ ++ G+++ M ++ V+ T ++D+
Sbjct: 209 CLFFEMVEVGVEPNPVTMVCAISACAKLKDLELGKKVCNLM-TELGVKSNTLVVNALLDM 267
Query: 374 LGRAG 378
+ G
Sbjct: 268 YMKCG 272
>gi|225445386|ref|XP_002281711.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
Length = 711
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 244/619 (39%), Positives = 357/619 (57%), Gaps = 26/619 (4%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM-------PEKNVVSWTVMLGGFIRDSRI 53
+P + +++RGY + + +A LF+Q+ P++ G + + +
Sbjct: 100 IPNPTTFTCNSIIRGYTNKNLPRQA-ILFYQLMMLQGLDPDRFTFPSLFKSCGVLCEGKQ 158
Query: 54 DDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNN 113
+ D Q ++ Y G + R++FD+M K+V+SW TMI Y +
Sbjct: 159 LHCHST-KLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAYAQWD 217
Query: 114 RIDVARKLFEVMP----EKNEVSWTAMLMGYTQCGRIQD---AWELFKAMPMKSV----V 162
A KLF M + NE++ +L T C R +D A ++ K + + V
Sbjct: 218 LPHEAIKLFRRMEIASVKPNEITLVNVL---TACARSRDLETAKQVHKYIDETGIGFHTV 274
Query: 163 ASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVY-ERKGYELEVIDLFTLMQKE 221
+++++ + G AR +F++M EK+ W+ MI + E YE E + LF MQ
Sbjct: 275 LTSALMDVYCKCGCYPLARDLFNKMPEKNLFCWNIMINGHVEDSDYE-EALSLFNEMQLS 333
Query: 222 GVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKG 281
GV+ + ++ S+L C L +L+ G+ +H + + + +VDV + + L+ MY KCG +
Sbjct: 334 GVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESA 393
Query: 282 KLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYT 341
+F KD++ W ++I G A G G K+L++FHEM S V PD +T VGVL+ACS+
Sbjct: 394 MRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSHA 453
Query: 342 GKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGS 401
G V EG F SM +KY ++P EHY CMVD+LGRAG++ +A LI+ MP PD +
Sbjct: 454 GLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPMAPDYFVLVG 513
Query: 402 LLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNV 461
LL ACR H L +AE AA++L++L+PKN G Y+LLSNIY+S + ++R+ M +RN+
Sbjct: 514 LLSACRIHGNLVVAERAAQQLIELDPKNGGTYVLLSNIYSSMKNWEAAKKMRELMVERNI 573
Query: 462 IKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVD 521
KPPGCS IEV VH F D VSHP+ I L+ + L+ AGY PD S VL D+D
Sbjct: 574 KKPPGCSAIEVGGVVHEFVKGD-VSHPQSSEIYETLDDMMRRLKSAGYVPDKSEVLFDMD 632
Query: 522 EEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILR 581
E+EK + L HSEKLA+A+GL+ G PIRV+KNLRVC DCHSA+K IS+V REII+R
Sbjct: 633 EKEKENELSLHSEKLAIAFGLLSTTPGTPIRVVKNLRVCSDCHSAMKFISEVYNREIIVR 692
Query: 582 DANRFHHFKDGLCSCRDYW 600
D NRFHHF G CSCRD+W
Sbjct: 693 DRNRFHHFTKGSCSCRDFW 711
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/341 (26%), Positives = 167/341 (48%), Gaps = 18/341 (5%)
Query: 75 VLGYC---QDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVM----PE 127
++ +C G + R +F+++P + ++I GY N N A +++M +
Sbjct: 78 IVAFCALHDSGSLPYARLVFNQIPNPTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLD 137
Query: 128 KNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQN-----GEVQKARV 182
+ ++ ++ + CG + + +L K AS++ I N G + AR
Sbjct: 138 PDRFTFPSL---FKSCGVLCEGKQL-HCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARK 193
Query: 183 VFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLAS 242
VFD+M K +W+ MI Y + E I LF M+ V+ N +L++VL+ CA
Sbjct: 194 VFDKMVNKSVVSWATMIGAYAQWDLPHEAIKLFRRMEIASVKPNEITLVNVLTACARSRD 253
Query: 243 LDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISG 302
L+ +QVH + + S L+ +Y KCG + +F+ K++ WN +I+G
Sbjct: 254 LETAKQVHKYIDETGIGFHTVLTSALMDVYCKCGCYPLARDLFNKMPEKNLFCWNIMING 313
Query: 303 YAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEP 362
+ + E++L +F+EM SGV D VT+ +L AC++ G ++ G+ + ++ K +E
Sbjct: 314 HVEDSDYEEALSLFNEMQLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIE-KEKIEV 372
Query: 363 KTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
+VD+ + G +E AM++ + MP E D + W +L+
Sbjct: 373 DVALGTALVDMYAKCGSIESAMRVFQEMP-EKDVMTWTALI 412
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 108/235 (45%), Gaps = 18/235 (7%)
Query: 228 PSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYI--KCGELVKGKLIF 285
P L+S L C +++ L +Q+HAQ++R VD + AS ++ G L +L+F
Sbjct: 42 PCLLS-LEKCTTMSQL---KQIHAQMLRTCLFVDPFSASKIVAFCALHDSGSLPYARLVF 97
Query: 286 DNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVK 345
+ + NSII GY L +++ + M G+ PD T + +C G +
Sbjct: 98 NQIPNPTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLFKSC---GVLC 154
Query: 346 EGREIF-ESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLG 404
EG+++ S K + + ++ ++++ G + A K+ + M + W +++G
Sbjct: 155 EGKQLHCHSTKLGFASDAYIQNT--LMNMYSNCGCLVSARKVFDKM-VNKSVVSWATMIG 211
Query: 405 ACRTHMKLDLAEVAAKKLLQLEPKNAGPY-ILLSNIYASQGRFHDVAELRKNMRK 458
A + + DL A K ++E + P I L N+ + R D+ E K + K
Sbjct: 212 A---YAQWDLPHEAIKLFRRMEIASVKPNEITLVNVLTACARSRDL-ETAKQVHK 262
>gi|224134923|ref|XP_002327523.1| predicted protein [Populus trichocarpa]
gi|222836077|gb|EEE74498.1| predicted protein [Populus trichocarpa]
Length = 635
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 227/591 (38%), Positives = 346/591 (58%), Gaps = 23/591 (3%)
Query: 18 EEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEK----DVVAQTN 73
E G + A LF +PE +V SW +M G+ R + L+ M E+ D
Sbjct: 60 EFGDMCYARQLFDTIPEPSVFSWNIMFKGYSRIACPKLGVSLYLEMLERNVKPDCYTYPF 119
Query: 74 MVLGYCQDGRVDEGREIFDEMPK----KNVISWTTMISGYVNNNRIDVARKLFEVMPEKN 129
+ G+ + + GRE+ + K NV + +I+ Y ID+AR +F++ + +
Sbjct: 120 LFKGFTRSVALQLGRELHCHVVKYGLDSNVFAHNALINMYSLCGLIDMARGIFDMSCKSD 179
Query: 130 EVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMRE 189
V+W AM+ GY RI+ K V++ +++ G G+V AR F +M E
Sbjct: 180 VVTWNAMISGYN---RIK-----------KDVISWTAIVTGFVNTGQVDAARKYFHKMPE 225
Query: 190 KDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQV 249
+D +W+ MI Y R E + LF MQ ++ + +++SVL+ CA L +L+ G +
Sbjct: 226 RDHVSWTAMIDGYLRLNCYKEALMLFREMQTSKIKPDEFTMVSVLTACAQLGALELGEWI 285
Query: 250 HAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLG 309
+ + + D +V + LI MY KCG + IF+ +D W +++ G A G G
Sbjct: 286 RTYIDKNKVKNDTFVGNALIDMYFKCGNVEMALSIFNTLPQRDKFTWTAMVVGLAINGCG 345
Query: 310 EKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYAC 369
E++L +F +M + V PD+VT VGVLSAC++TG V EG++ F SM +++ +EP HY C
Sbjct: 346 EEALNMFSQMLKASVTPDEVTYVGVLSACTHTGMVDEGKKFFASMTARHGIEPNIAHYGC 405
Query: 370 MVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKN 429
MVDLLG+AG +++A ++I+ MP +P++I+WG+LLGACR H ++AE A +++L+LEP N
Sbjct: 406 MVDLLGKAGHLKEAHEIIKNMPMKPNSIVWGALLGACRIHKDAEMAERAIEQILELEPNN 465
Query: 430 AGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPE 489
Y+L NIYA+ ++ + ELR+ M R + K PGCS IE+ VH F D SHP+
Sbjct: 466 GAVYVLQCNIYAACNKWDKLRELRQVMMDRGIKKTPGCSLIEMNGIVHEFVAGD-QSHPQ 524
Query: 490 HPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGV 549
I L K+ L+ AGY P++S V D+ EE+K +++ HSEKLA+A+GL+ GV
Sbjct: 525 TKEIYGKLNKMTSDLKIAGYSPNTSEVFLDIAEEDKENAVYRHSEKLAIAFGLINSGPGV 584
Query: 550 PIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
IR++KNLR+C DCH KL+SKV RE+I+RD RFHHF+ G CSC+DYW
Sbjct: 585 TIRIVKNLRMCIDCHHVAKLVSKVYDREVIVRDRTRFHHFRHGSCSCKDYW 635
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 99/420 (23%), Positives = 182/420 (43%), Gaps = 72/420 (17%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV----VSWTVMLGGFIRDSRIDDA 56
+PE +V SW M +GY +L+ +M E+NV ++ + GF R +
Sbjct: 74 IPEPSVFSWNIMFKGYSRIACPKLGVSLYLEMLERNVKPDCYTYPFLFKGFTRSVALQLG 133
Query: 57 RRLFDMMP----EKDVVAQTNMVLGYCQDGRVDEGREIFD-----------------EMP 95
R L + + +V A ++ Y G +D R IFD
Sbjct: 134 RELHCHVVKYGLDSNVFAHNALINMYSLCGLIDMARGIFDMSCKSDVVTWNAMISGYNRI 193
Query: 96 KKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKA 155
KK+VISWT +++G+VN ++D ARK F MPE++ VSWTAM+ GY + ++A LF+
Sbjct: 194 KKDVISWTAIVTGFVNTGQVDAARKYFHKMPERDHVSWTAMIDGYLRLNCYKEALMLFRE 253
Query: 156 M----------PMKSVVAS-----------------------------NSMILGLGQNGE 176
M M SV+ + N++I + G
Sbjct: 254 MQTSKIKPDEFTMVSVLTACAQLGALELGEWIRTYIDKNKVKNDTFVGNALIDMYFKCGN 313
Query: 177 VQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSV 236
V+ A +F+ + ++D TW+ M+ G E +++F+ M K V + + + VLS
Sbjct: 314 VEMALSIFNTLPQRDKFTWTAMVVGLAINGCGEEALNMFSQMLKASVTPDEVTYVGVLSA 373
Query: 237 CASLASLDHGRQVHAQLV-RCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASK-DIV 294
C +D G++ A + R + ++ ++ + K G L + I N K + +
Sbjct: 374 CTHTGMVDEGKKFFASMTARHGIEPNIAHYGCMVDLLGKAGHLKEAHEIIKNMPMKPNSI 433
Query: 295 MWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDD----VTLVGVLSACSYTGKVKEGREI 350
+W +++ + E + + ++ + P++ V + +AC+ K++E R++
Sbjct: 434 VWGALLGACRIHKDAEMAERAIEQILE--LEPNNGAVYVLQCNIYAACNKWDKLRELRQV 491
>gi|449444429|ref|XP_004139977.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Cucumis sativus]
gi|449475689|ref|XP_004154524.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Cucumis sativus]
Length = 586
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 223/532 (41%), Positives = 326/532 (61%), Gaps = 15/532 (2%)
Query: 78 YCQDGRVDEGREIFDEMPKKNVISWTTMISGY----VNNNRIDVARKLFEVMPEKNEVSW 133
Y + G +DE R +FDEMP +NV+SWTTMIS Y +N+ +D + N ++
Sbjct: 61 YVKFGLLDEARNLFDEMPDRNVVSWTTMISAYSNSNLNHKALDFLILMLREGVRPNMYTY 120
Query: 134 TAMLMGYTQCGRIQDAWEL----FKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMRE 189
+++L C + + +L K V +++I + GE A VF++M
Sbjct: 121 SSVLRA---CDGLLNLRQLHGSILKVGLESDVFVRSALIDTYSKLGEQHDALNVFNEMIT 177
Query: 190 KDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQV 249
D W+ +I + + E + L+ M++ + +L SVL C LA L+ GRQV
Sbjct: 178 GDLVVWNSIIGGFAQNSDGDETLHLYKRMKRADFVADQSTLTSVLRACTGLALLELGRQV 237
Query: 250 HAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFAS-KDIVMWNSIISGYAQYGL 308
H +++ +D D+ + + L+ MY KCG L L+F + KD++ W+++I+G AQ G
Sbjct: 238 HVHVLK--YDQDLILNNALLDMYCKCGSLEDANLLFTRMMTEKDVISWSTMIAGLAQNGF 295
Query: 309 GEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYA 368
+LK+F M S G P+ +T++GVL ACS+ G V +G F+SMK + ++P EHY
Sbjct: 296 SADALKLFEAMKSKGPKPNYITILGVLFACSHAGLVNDGWYYFQSMKEHFGIDPGREHYG 355
Query: 369 CMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPK 428
C++DLLGRAG++++A+KLI M EPDA+ W LLGACR H +DLA AAK++L+L+P
Sbjct: 356 CIIDLLGRAGKLDEAVKLIHEMNHEPDAVTWRILLGACRVHKNVDLAIYAAKEILKLDPA 415
Query: 429 NAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHP 488
+AG YILLSNIYA+ ++ DVAE+R+ MR R V K PGCSWIEV K+VH F D SHP
Sbjct: 416 DAGTYILLSNIYANSQKWEDVAEVRRKMRTRGVKKDPGCSWIEVSKQVHAFILGDN-SHP 474
Query: 489 EHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEG 548
I R L ++ L GY PD++FVL D++ E+ SL+YHSEKLA+ +GL+ LP
Sbjct: 475 RIEEIKRELSQLIQRLMRLGYVPDTNFVLQDLEGEQMEDSLQYHSEKLAIVFGLMSLPNQ 534
Query: 549 VPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
I + KNLR+CGDCH KL+S++ R I++RD R+HHF+ G+CSC DYW
Sbjct: 535 KTIHIRKNLRICGDCHIFAKLVSQLENRVIVIRDPIRYHHFRGGVCSCGDYW 586
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 127/241 (52%), Gaps = 6/241 (2%)
Query: 165 NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVR 224
N++I + G + +AR +FD+M +++ +W+ MI Y + +D LM +EGVR
Sbjct: 55 NTLINMYVKFGLLDEARNLFDEMPDRNVVSWTTMISAYSNSNLNHKALDFLILMLREGVR 114
Query: 225 VNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLI 284
N + SVL C L +L RQ+H +++ + DV+V S LI Y K GE +
Sbjct: 115 PNMYTYSSVLRACDGLLNL---RQLHGSILKVGLESDVFVRSALIDTYSKLGEQHDALNV 171
Query: 285 FDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKV 344
F+ + D+V+WNSII G+AQ G+++L ++ M + + D TL VL AC+ +
Sbjct: 172 FNEMITGDLVVWNSIIGGFAQNSDGDETLHLYKRMKRADFVADQSTLTSVLRACTGLALL 231
Query: 345 KEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLG 404
+ GR++ + KY + + ++D+ + G +EDA L M E D I W +++
Sbjct: 232 ELGRQVHVHVL-KYDQDLILNN--ALLDMYCKCGSLEDANLLFTRMMTEKDVISWSTMIA 288
Query: 405 A 405
Sbjct: 289 G 289
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/339 (20%), Positives = 147/339 (43%), Gaps = 47/339 (13%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMM------ 63
++ YV+ G++ EA LF +MP++NVVSWT M+ + + A +M
Sbjct: 55 NTLINMYVKFGLLDEARNLFDEMPDRNVVSWTTMISAYSNSNLNHKALDFLILMLREGVR 114
Query: 64 ------------------------------PEKDVVAQTNMVLGYCQDGRVDEGREIFDE 93
E DV ++ ++ Y + G + +F+E
Sbjct: 115 PNMYTYSSVLRACDGLLNLRQLHGSILKVGLESDVFVRSALIDTYSKLGEQHDALNVFNE 174
Query: 94 MPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELF 153
M +++ W ++I G+ N+ D L++ M + V+ + L + EL
Sbjct: 175 MITGDLVVWNSIIGGFAQNSDGDETLHLYKRMKRADFVADQSTLTSVLRACTGLALLELG 234
Query: 154 KAMPM------KSVVASNSMILGLGQNGEVQKARVVFDQ-MREKDDATWSGMIKVYERKG 206
+ + + + ++ +N+++ + G ++ A ++F + M EKD +WS MI + G
Sbjct: 235 RQVHVHVLKYDQDLILNNALLDMYCKCGSLEDANLLFTRMMTEKDVISWSTMIAGLAQNG 294
Query: 207 YELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVA- 265
+ + + LF M+ +G + N+ +++ VL C+ ++ G + Q ++ F +D
Sbjct: 295 FSADALKLFEAMKSKGPKPNYITILGVLFACSHAGLVNDG-WYYFQSMKEHFGIDPGREH 353
Query: 266 -SVLITMYIKCGELVKG-KLIFDNFASKDIVMWNSIISG 302
+I + + G+L + KLI + D V W ++
Sbjct: 354 YGCIIDLLGRAGKLDEAVKLIHEMNHEPDAVTWRILLGA 392
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 86/190 (45%), Gaps = 9/190 (4%)
Query: 218 MQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGE 277
M + + + + ++ C ++ R VH + ++ ++ + LI MY+K G
Sbjct: 7 MHRNRLSADAITYSELIKCCLVRGAVQQARLVHEHVFSNGYEPKTFLINTLINMYVKFGL 66
Query: 278 LVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSA 337
L + + +FD +++V W ++IS Y+ L K+L M GV P+ T VL A
Sbjct: 67 LDEARNLFDEMPDRNVVSWTTMISAYSNSNLNHKALDFLILMLREGVRPNMYTYSSVLRA 126
Query: 338 CSYTGKVKE--GREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPD 395
C +++ G + ++S V + ++D + G+ DA+ + M D
Sbjct: 127 CDGLLNLRQLHGSILKVGLESDVFVR------SALIDTYSKLGEQHDALNVFNEM-ITGD 179
Query: 396 AIIWGSLLGA 405
++W S++G
Sbjct: 180 LVVWNSIIGG 189
>gi|357440579|ref|XP_003590567.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479615|gb|AES60818.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1212
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 231/641 (36%), Positives = 360/641 (56%), Gaps = 54/641 (8%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEK--- 66
A++ Y G + +A +F M K+ VSW +L G +++ DA F M +
Sbjct: 290 NALIAMYANCGQMEDAERVFKSMLFKDCVSWNTLLSGMVQNDMYSDAINHFQDMQDSGQK 349
Query: 67 -DVVAQTNMVLGYCQDGRVDEGREI----------------------------------- 90
D V+ NM+ + + G E+
Sbjct: 350 PDQVSVLNMIAASGRSANLLAGMEVHAYAIKHGIDSNMHIGNSLIDMYGKCCCVKYMGSA 409
Query: 91 FDEMPKKNVISWTTMISGYVNNN-RIDVARKLFEVMPEKNEVSWTAMLMG--YTQCGRIQ 147
F+ MP+K++ISWTT+I+GY N +D L +V EK +V M++G C ++
Sbjct: 410 FEYMPEKDLISWTTIIAGYAQNECHLDALNLLRKVQLEKMDVD--PMMIGSILLACSGLK 467
Query: 148 DAWELFKAMP-------MKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIK 200
+L K + + ++ N+++ G+ V AR VF+ + KD +W+ MI
Sbjct: 468 SE-KLIKEIHGYVLKGGLADILIQNAIVNVYGELALVDYARHVFESINSKDIVSWTSMIT 526
Query: 201 VYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDV 260
G +E ++LF + + + + +L+SVL A+L+SL G+++H L+R F +
Sbjct: 527 CCVHNGLAIEALELFNSLIETNIEPDLITLVSVLYAAAALSSLKKGKEIHGFLIRKGFFL 586
Query: 261 DVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMF 320
+ +A+ L+ MY +CG + + IF+ +D+++W S+I+ +G G+ ++ +F +M
Sbjct: 587 EGLIANSLVDMYARCGTMENARNIFNYVKQRDLILWTSMINANGMHGCGKDAIDLFSKMT 646
Query: 321 SSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQV 380
V+PD +T + +L ACS++G V EG++ FE MK++Y +EP EHYAC+VDLL R+ +
Sbjct: 647 DENVLPDHITFLALLYACSHSGLVVEGKQHFEIMKNEYKLEPWPEHYACLVDLLARSNSL 706
Query: 381 EDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIY 440
E+A + MP EP A +W +LLGACR H DL EVAAKKLLQL +N+G Y+L+SN +
Sbjct: 707 EEAYHFVRNMPIEPSAEVWCALLGACRIHSNNDLGEVAAKKLLQLNTENSGNYVLVSNTF 766
Query: 441 ASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKI 500
A+ GR++DV E+R M+ + K PGCSWIEVE K+H F RD SHP+ I L +
Sbjct: 767 AADGRWNDVEEVRSIMKGNKLKKKPGCSWIEVENKIHTFMARD-KSHPQCNNIYLKLAQF 825
Query: 501 GGLLRE-AGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRV 559
LL+E GY + V HDV EEEK L HSE+LA+ YGL+ +G +R+ KNLR+
Sbjct: 826 TKLLKEKGGYRAQTKLVFHDVCEEEKTQMLYGHSERLALGYGLLVTSKGTCLRITKNLRI 885
Query: 560 CGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
C DCH+ K+ S++ R +++RDA+RFHHF+ GLCSC D+W
Sbjct: 886 CDDCHAFFKIASEISQRTLVVRDASRFHHFERGLCSCGDFW 926
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 106/390 (27%), Positives = 187/390 (47%), Gaps = 19/390 (4%)
Query: 68 VVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPE 127
V T V Y + G + ++FD+M ++ + +W MI V+ R A +L++ M
Sbjct: 82 VFLDTKFVHMYGKCGSFYDAVKVFDKMSERTIFTWNAMIGACVSAGRYVEAIELYKEMRV 141
Query: 128 KNEVSWTAMLMG--YTQCGRIQD---AWELFKAMPMKS-----VVASNSMILGLGQNGEV 177
VS A CG ++ E+ + +K V N++I + G++
Sbjct: 142 LG-VSLDAFTFPCVLKACGAFKERRLGCEI-HGVAVKCGYGGFVFVCNALIAMYAKCGDL 199
Query: 178 QKARVVFDQ-MREKDD-ATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLS 235
ARV+FD + EKDD +W+ +I + +G LE + LF MQ+ GV N + +S L
Sbjct: 200 GGARVLFDSGLMEKDDPVSWNSIISAHVGEGESLEALSLFRRMQEVGVESNTYTFVSALQ 259
Query: 236 VCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVM 295
C + GR +HA +++ DVYV++ LI MY CG++ + +F + KD V
Sbjct: 260 ACEGPTFIKIGRGIHAVILKSNHFTDVYVSNALIAMYANCGQMEDAERVFKSMLFKDCVS 319
Query: 296 WNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMK 355
WN+++SG Q + ++ F +M SG PD V+++ +++A + + G E+ +
Sbjct: 320 WNTLLSGMVQNDMYSDAINHFQDMQDSGQKPDQVSVLNMIAASGRSANLLAGMEV-HAYA 378
Query: 356 SKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL-GACRTHMKLDL 414
K+ ++ ++D+ G+ V+ E MP E D I W +++ G + LD
Sbjct: 379 IKHGIDSNMHIGNSLIDMYGKCCCVKYMGSAFEYMP-EKDLISWTTIIAGYAQNECHLDA 437
Query: 415 AEVAAKKLLQLEPKNAGPYILLSNIYASQG 444
+ K +QLE + P ++ S + A G
Sbjct: 438 LNLLRK--VQLEKMDVDPMMIGSILLACSG 465
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 106/427 (24%), Positives = 207/427 (48%), Gaps = 23/427 (5%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPE----KNVVSWTVMLGGFIRDSRIDDA 56
M + + VSW +++ +V EG EA +LF +M E N ++ L + I
Sbjct: 211 MEKDDPVSWNSIISAHVGEGESLEALSLFRRMQEVGVESNTYTFVSALQACEGPTFIKIG 270
Query: 57 RRLFDMMPEK----DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
R + ++ + DV ++ Y G++++ +F M K+ +SW T++SG V N
Sbjct: 271 RGIHAVILKSNHFTDVYVSNALIAMYANCGQMEDAERVFKSMLFKDCVSWNTLLSGMVQN 330
Query: 113 NRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVAS---- 164
+ A F+ M + ++VS M+ + + E+ A +K + S
Sbjct: 331 DMYSDAINHFQDMQDSGQKPDQVSVLNMIAASGRSANLLAGMEV-HAYAIKHGIDSNMHI 389
Query: 165 -NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGV 223
NS+I G+ V+ F+ M EKD +W+ +I Y + L+ ++L +Q E +
Sbjct: 390 GNSLIDMYGKCCCVKYMGSAFEYMPEKDLISWTTIIAGYAQNECHLDALNLLRKVQLEKM 449
Query: 224 RVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKL 283
V+ + S+L C+ L S +++H +++ D+ + + ++ +Y + + +
Sbjct: 450 DVDPMMIGSILLACSGLKSEKLIKEIHGYVLKGGL-ADILIQNAIVNVYGELALVDYARH 508
Query: 284 IFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGK 343
+F++ SKDIV W S+I+ GL ++L++F+ + + + PD +TLV VL A +
Sbjct: 509 VFESINSKDIVSWTSMITCCVHNGLAIEALELFNSLIETNIEPDLITLVSVLYAAAALSS 568
Query: 344 VKEGREIFESMKSK-YLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSL 402
+K+G+EI + K + +E + +VD+ R G +E+A + + + D I+W S+
Sbjct: 569 LKKGKEIHGFLIRKGFFLEGLIAN--SLVDMYARCGTMENARNIFNYVK-QRDLILWTSM 625
Query: 403 LGACRTH 409
+ A H
Sbjct: 626 INANGMH 632
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 138/292 (47%), Gaps = 10/292 (3%)
Query: 158 MKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTL 217
+ SV + G+ G A VFD+M E+ TW+ MI G +E I+L+
Sbjct: 79 LDSVFLDTKFVHMYGKCGSFYDAVKVFDKMSERTIFTWNAMIGACVSAGRYVEAIELYKE 138
Query: 218 MQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGE 277
M+ GV ++ + VL C + G ++H V+C + V+V + LI MY KCG+
Sbjct: 139 MRVLGVSLDAFTFPCVLKACGAFKERRLGCEIHGVAVKCGYGGFVFVCNALIAMYAKCGD 198
Query: 278 LVKGKLIFDN--FASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVL 335
L +++FD+ D V WNSIIS + G ++L +F M GV + T V L
Sbjct: 199 LGGARVLFDSGLMEKDDPVSWNSIISAHVGEGESLEALSLFRRMQEVGVESNTYTFVSAL 258
Query: 336 SACSYTGKVKEGREIFES-MKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEP 394
AC +K GR I +KS + + + ++ + GQ+EDA ++ ++M F+
Sbjct: 259 QACEGPTFIKIGRGIHAVILKSNHFTDVYVSN--ALIAMYANCGQMEDAERVFKSMLFK- 315
Query: 395 DAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGP-YILLSNIYASQGR 445
D + W +LL ++ D+ A ++ P + + N+ A+ GR
Sbjct: 316 DCVSWNTLLSG---MVQNDMYSDAINHFQDMQDSGQKPDQVSVLNMIAASGR 364
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 101/425 (23%), Positives = 188/425 (44%), Gaps = 23/425 (5%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
M ER + +W AM+ V G EA L+ +M V ++ RRL
Sbjct: 108 MSERTIFTWNAMIGACVSAGRYVEAIELYKEMRVLGVSLDAFTFPCVLKACGAFKERRLG 167
Query: 61 DMMPEKDV-------VAQTNMVLG-YCQDGRVDEGREIFDE--MPKKNVISWTTMISGYV 110
+ V V N ++ Y + G + R +FD M K + +SW ++IS +V
Sbjct: 168 CEIHGVAVKCGYGGFVFVCNALIAMYAKCGDLGGARVLFDSGLMEKDDPVSWNSIISAHV 227
Query: 111 NNNR----IDVARKLFEVMPEKNEVSWTAMLMG-----YTQCGRIQDAWELFKAMPMKSV 161
+ + R++ EV E N ++ + L + + GR A + K+ V
Sbjct: 228 GEGESLEALSLFRRMQEVGVESNTYTFVSALQACEGPTFIKIGRGIHA-VILKSNHFTDV 286
Query: 162 VASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKE 221
SN++I G+++ A VF M KD +W+ ++ + + I+ F MQ
Sbjct: 287 YVSNALIAMYANCGQMEDAERVFKSMLFKDCVSWNTLLSGMVQNDMYSDAINHFQDMQDS 346
Query: 222 GVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKG 281
G + + S++++++ A+L G +VHA ++ D ++++ + LI MY KC +
Sbjct: 347 GQKPDQVSVLNMIAASGRSANLLAGMEVHAYAIKHGIDSNMHIGNSLIDMYGKCCCVKYM 406
Query: 282 KLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYT 341
F+ KD++ W +II+GYAQ +L + ++ + D + + +L ACS
Sbjct: 407 GSAFEYMPEKDLISWTTIIAGYAQNECHLDALNLLRKVQLEKMDVDPMMIGSILLACSGL 466
Query: 342 GKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGS 401
K +EI + L + ++ +V++ G V+ A + E++ D + W S
Sbjct: 467 KSEKLIKEIHGYVLKGGLADILIQN--AIVNVYGELALVDYARHVFESIN-SKDIVSWTS 523
Query: 402 LLGAC 406
++ C
Sbjct: 524 MITCC 528
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 135/277 (48%), Gaps = 18/277 (6%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MPE++++SWT ++ GY + +A L ++ + + +M+G + + +L
Sbjct: 413 MPEKDLISWTTIIAGYAQNECHLDALNLLRKVQLEKMDVDPMMIGSILLACSGLKSEKLI 472
Query: 61 DMMPE-------KDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNN 113
+ D++ Q +V Y + VD R +F+ + K+++SWT+MI+ V+N
Sbjct: 473 KEIHGYVLKGGLADILIQNAIVNVYGELALVDYARHVFESINSKDIVSWTSMITCCVHNG 532
Query: 114 RIDVARKLFEVMPEKN---------EVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVAS 164
A +LF + E N V + A + + G+ + + K ++ ++A
Sbjct: 533 LAIEALELFNSLIETNIEPDLITLVSVLYAAAALSSLKKGKEIHGFLIRKGFFLEGLIA- 591
Query: 165 NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVR 224
NS++ + G ++ AR +F+ ++++D W+ MI G + IDLF+ M E V
Sbjct: 592 NSLVDMYARCGTMENARNIFNYVKQRDLILWTSMINANGMHGCGKDAIDLFSKMTDENVL 651
Query: 225 VNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVD 261
+ + +++L C+ + G+Q H ++++ ++ ++
Sbjct: 652 PDHITFLALLYACSHSGLVVEGKQ-HFEIMKNEYKLE 687
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 85/178 (47%), Gaps = 9/178 (5%)
Query: 233 VLSVCASLASLDHGRQVHAQLVRCQFDVD-VYVASVLITMYIKCGELVKGKLIFDNFASK 291
L +CAS +L G+Q+HA ++ Q +D V++ + + MY KCG +FD + +
Sbjct: 52 ALELCASHKALPQGQQLHAHFLKTQNYLDSVFLDTKFVHMYGKCGSFYDAVKVFDKMSER 111
Query: 292 DIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIF 351
I WN++I G ++++++ EM GV D T VL AC + + G EI
Sbjct: 112 TIFTWNAMIGACVSAGRYVEAIELYKEMRVLGVSLDAFTFPCVLKACGAFKERRLGCEIH 171
Query: 352 E-SMKSKYLVEPKTEHYAC--MVDLLGRAGQVEDAMKLIEAMPFEP-DAIIWGSLLGA 405
++K Y + C ++ + + G + A L ++ E D + W S++ A
Sbjct: 172 GVAVKCGY----GGFVFVCNALIAMYAKCGDLGGARVLFDSGLMEKDDPVSWNSIISA 225
>gi|326532272|dbj|BAK05065.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 889
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 232/648 (35%), Positives = 364/648 (56%), Gaps = 60/648 (9%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV----VSWTVMLGGFIRDSRIDDA 56
MPER+VVSW MV + G EA ++ M + V ++T L + S +
Sbjct: 254 MPERDVVSWNMMVSALSQSGRAREALSVAVDMHNRGVRLDSTTYTSSLTACAKLSSLGWG 313
Query: 57 RRLFDM----MPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVN- 111
++L +P D + MV Y + G E R +F + +N +SWT +I G++
Sbjct: 314 KQLHAQVIRSLPCIDPYVASAMVELYAKCGCFKEARRVFSSLRDRNTVSWTVLIGGFLQY 373
Query: 112 --------------------------------NNRID--VARKLFEVMPEKNE----VSW 133
+NR+D +AR+L + + V
Sbjct: 374 GCFSESLELFNQMRAELMTVDQFALATIISGCSNRMDMCLARQLHSLSLKSGHTRAVVIS 433
Query: 134 TAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDA 193
+++ Y +CG +Q+A +F +M + +V+ M+ Q G + KAR FD M ++
Sbjct: 434 NSLISMYAKCGNLQNAESIFSSMEERDIVSWTGMLTAYSQVGNIGKAREFFDGMSTRNVI 493
Query: 194 TWSGMIKVYERKGYELEVIDLFTLMQKE-GVRVNFPSLISVLSVCASLASLDHGRQVHAQ 252
TW+ M+ Y + G E + + +++ M E V ++ + +++ CA + + G Q+
Sbjct: 494 TWNAMLGAYIQHGAEEDGLKMYSAMLTEKDVIPDWVTYVTLFRGCADMGANKLGDQITGH 553
Query: 253 LVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKS 312
V+ +D V + +ITMY KCG + + + IFD + KD+V WN++I+GY+Q+G+G+++
Sbjct: 554 TVKVGLILDTSVMNAVITMYSKCGRISEARKIFDFLSRKDLVSWNAMITGYSQHGMGKQA 613
Query: 313 LKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVD 372
+++F +M G PD ++ V VLS+CS++G V+EG+ F+ +K + V P EH++CMVD
Sbjct: 614 IEIFDDMLKKGAKPDYISYVAVLSSCSHSGLVQEGKFYFDMLKRDHNVSPGLEHFSCMVD 673
Query: 373 LLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGP 432
LL RAG + +A LI+ MP +P A +WG+LL AC+TH +LAE+AAK L L+ ++G
Sbjct: 674 LLARAGNLIEAKNLIDEMPMKPTAEVWGALLSACKTHGNNELAELAAKHLFDLDSPDSGG 733
Query: 433 YILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPM 492
Y+LL+ IYA G+ D A++RK MR + + K PG SW+EV+ KVH+F D VSHP+
Sbjct: 734 YMLLAKIYADAGKSVDSAQVRKLMRDKGIKKNPGYSWMEVKNKVHVFKAED-VSHPQVIA 792
Query: 493 IMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIR 552
I L+++ + + GY E + S +HSEKLAVA+G++ LP +PI
Sbjct: 793 IREKLDELMEKIAQLGYV-----------RTESLRSEIHHSEKLAVAFGIMNLPAWMPIH 841
Query: 553 VMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
+MKNLR+CGDCH+ IKLIS V GRE ++RDA RFHHFK G CSC DYW
Sbjct: 842 IMKNLRICGDCHTVIKLISTVTGREFVIRDAVRFHHFKGGSCSCGDYW 889
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 106/409 (25%), Positives = 200/409 (48%), Gaps = 18/409 (4%)
Query: 10 TAMVRGYVEEGMITEA-GTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDV 68
++ Y+ G + +A G L + E NV++ +M+ G+ + + DA LF MP +DV
Sbjct: 67 NTLLHAYLSCGALPDARGLLRGDITEPNVITHNIMMNGYAKLGSLSDAEELFGRMPRRDV 126
Query: 69 VAQTNMVLGYCQDGRVDEGREIF-------DEMPKKNVISWTTMISGYVNNNRIDVARKL 121
+ ++ GY Q GR + E F D +P G + + +VA +L
Sbjct: 127 TSWNTLMSGYYQSGRFLDAMESFVSMRRSGDSLPNAFTFGCAMKSCGALGWH--EVALQL 184
Query: 122 FEVMP----EKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEV 177
++ + + T ++ + +CG + A + F + +V NSM+ G ++ V
Sbjct: 185 LGLLTKFGFQGDPDVATGIVDMFVRCGAVDFASKQFSQIERPTVFCRNSMLAGYAKSYGV 244
Query: 178 QKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVC 237
A +F+ M E+D +W+ M+ + G E + + M GVR++ + S L+ C
Sbjct: 245 DHALELFESMPERDVVSWNMMVSALSQSGRAREALSVAVDMHNRGVRLDSTTYTSSLTAC 304
Query: 238 ASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWN 297
A L+SL G+Q+HAQ++R +D YVAS ++ +Y KCG + + +F + ++ V W
Sbjct: 305 AKLSSLGWGKQLHAQVIRSLPCIDPYVASAMVELYAKCGCFKEARRVFSSLRDRNTVSWT 364
Query: 298 SIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFE-SMKS 356
+I G+ QYG +SL++F++M + + D L ++S CS + R++ S+KS
Sbjct: 365 VLIGGFLQYGCFSESLELFNQMRAELMTVDQFALATIISGCSNRMDMCLARQLHSLSLKS 424
Query: 357 KYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
+ + ++ + + G +++A + +M E D + W +L A
Sbjct: 425 GHTRAVVISN--SLISMYAKCGNLQNAESIFSSME-ERDIVSWTGMLTA 470
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 114/521 (21%), Positives = 228/521 (43%), Gaps = 115/521 (22%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDA---- 56
+ E NV++ M+ GY + G +++A LF +MP ++V SW ++ G+ + R DA
Sbjct: 90 ITEPNVITHNIMMNGYAKLGSLSDAEELFGRMPRRDVTSWNTLMSGYYQSGRFLDAMESF 149
Query: 57 ---RRLFDMMP---------------------------------EKDVVAQTNMVLGYCQ 80
RR D +P + D T +V + +
Sbjct: 150 VSMRRSGDSLPNAFTFGCAMKSCGALGWHEVALQLLGLLTKFGFQGDPDVATGIVDMFVR 209
Query: 81 DGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGY 140
G VD + F ++ + V +M++GY + +D A +LFE MPE++ VSW M+
Sbjct: 210 CGAVDFASKQFSQIERPTVFCRNSMLAGYAKSYGVDHALELFESMPERDVVSWNMMVSAL 269
Query: 141 TQCGRIQDA---------------------------------W------ELFKAMPMKSV 161
+Q GR ++A W ++ +++P
Sbjct: 270 SQSGRAREALSVAVDMHNRGVRLDSTTYTSSLTACAKLSSLGWGKQLHAQVIRSLPCIDP 329
Query: 162 VASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKE 221
+++M+ + G ++AR VF +R+++ +W+ +I + + G E ++LF M+ E
Sbjct: 330 YVASAMVELYAKCGCFKEARRVFSSLRDRNTVSWTVLIGGFLQYGCFSESLELFNQMRAE 389
Query: 222 GVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELV-- 279
+ V+ +L +++S C++ + RQ+H+ ++ V +++ LI+MY KCG L
Sbjct: 390 LMTVDQFALATIISGCSNRMDMCLARQLHSLSLKSGHTRAVVISNSLISMYAKCGNLQNA 449
Query: 280 -----------------------------KGKLIFDNFASKDIVMWNSIISGYAQYGLGE 310
K + FD ++++++ WN+++ Y Q+G E
Sbjct: 450 ESIFSSMEERDIVSWTGMLTAYSQVGNIGKAREFFDGMSTRNVITWNAMLGAYIQHGAEE 509
Query: 311 KSLKVFHEMFS-SGVMPDDVTLVGVLSACSYTGKVKEGREIF-ESMKSKYLVEPKTEHYA 368
LK++ M + V+PD VT V + C+ G K G +I ++K +++ T
Sbjct: 510 DGLKMYSAMLTEKDVIPDWVTYVTLFRGCADMGANKLGDQITGHTVKVGLILD--TSVMN 567
Query: 369 CMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTH 409
++ + + G++ +A K+ + + D + W +++ H
Sbjct: 568 AVITMYSKCGRISEARKIFDFLS-RKDLVSWNAMITGYSQH 607
>gi|356526928|ref|XP_003532067.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Glycine max]
Length = 722
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 245/675 (36%), Positives = 369/675 (54%), Gaps = 96/675 (14%)
Query: 16 YVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMV 75
Y + G + A T F NV S+ ++ + + S I ARR+FD +P+ D+V+ ++
Sbjct: 54 YSKCGSLHNAQTSFHLTQYPNVFSYNTLINAYAKHSLIHIARRVFDEIPQPDIVSYNTLI 113
Query: 76 LGYCQDGRVDEGREIFDEMPK----------KNVISW----------------------- 102
Y G +F+E+ + VI+
Sbjct: 114 AAYADRGECGPTLRLFEEVRELRLGLDGFTLSGVITACGDDVGLVRQLHCFVVVCGHDCY 173
Query: 103 ----TTMISGYVNNNRIDVARKLFEVMPE---KNEVSWTAMLMGYTQCGRIQDAWELFKA 155
+++ Y + AR++F M E ++EVSW AM++ Q +A LF+
Sbjct: 174 ASVNNAVLACYSRKGFLSEARRVFREMGEGGGRDEVSWNAMIVACGQHREGMEAVGLFRE 233
Query: 156 M----------PMKSVVAS-------------NSMILGLGQNGEVQ-------------- 178
M M SV+ + + M++ G +G
Sbjct: 234 MVRRGLKVDMFTMASVLTAFTCVKDLVGGRQFHGMMIKSGFHGNSHVGSGLIDLYSKCAG 293
Query: 179 ---KARVVFDQMREKDDATWSGMIKVYERKGYELEVID---LFTLMQKEGVRVNFPSLIS 232
+ R VF+++ D W+ MI + YE D F MQ+ G R + S +
Sbjct: 294 SMVECRKVFEEITAPDLVLWNTMISGFSL--YEDLSEDGLWCFREMQRNGFRPDDCSFVC 351
Query: 233 VLSVCASLASLDHGRQVHAQLVRCQFDVD-VYVASVLITMYIKCGELVKGKLIFDNFASK 291
V S C++L+S G+QVHA ++ + V V + L+ MY KCG + + +FD
Sbjct: 352 VTSACSNLSSPSLGKQVHALAIKSDVPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEH 411
Query: 292 DIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIF 351
+ V NS+I+GYAQ+G+ +SL++F M + P+ +T + VLSAC +TGKV+EG++ F
Sbjct: 412 NTVSLNSMIAGYAQHGVEVESLRLFELMLEKDIAPNSITFIAVLSACVHTGKVEEGQKYF 471
Query: 352 ESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMK 411
MK ++ +EP+ EHY+CM+DLLGRAG++++A ++IE MPF P +I W +LLGACR H
Sbjct: 472 NMMKERFCIEPEAEHYSCMIDLLGRAGKLKEAERIIETMPFNPGSIEWATLLGACRKHGN 531
Query: 412 LDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIE 471
++LA AA + L+LEP NA PY++LSN+YAS R+ + A +++ MR+R V K PGCSWIE
Sbjct: 532 VELAVKAANEFLRLEPYNAAPYVMLSNMYASAARWEEAATVKRLMRERGVKKKPGCSWIE 591
Query: 472 VEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLL---REAGYCPDSSFVL---HDVDEEEK 525
++KKVH+F D HPMI + +G +L ++AGY PD + L +V+ +E+
Sbjct: 592 IDKKVHVFVAED----TSHPMIKEIHVYMGKMLKKMKQAGYVPDIRWALVKDEEVEPDER 647
Query: 526 VHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANR 585
L YHSEKLAVA+GL+ EGVPI V+KNLR+CGDCH+A+KLIS + GREI +RD +R
Sbjct: 648 ERRLLYHSEKLAVAFGLISTEEGVPILVVKNLRICGDCHNAVKLISALTGREITVRDTHR 707
Query: 586 FHHFKDGLCSCRDYW 600
FH FK+G CSCRDYW
Sbjct: 708 FHCFKEGHCSCRDYW 722
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 105/441 (23%), Positives = 198/441 (44%), Gaps = 52/441 (11%)
Query: 71 QTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNE 130
+ L Y + G + + F NV S+ T+I+ Y ++ I +AR++F+ +P+ +
Sbjct: 47 SNHFTLLYSKCGSLHNAQTSFHLTQYPNVFSYNTLINAYAKHSLIHIARRVFDEIPQPDI 106
Query: 131 VSWTAMLMGYTQCGRIQDAWELFK----------AMPMKSVVAS---------------- 164
VS+ ++ Y G LF+ + V+ +
Sbjct: 107 VSYNTLIAAYADRGECGPTLRLFEEVRELRLGLDGFTLSGVITACGDDVGLVRQLHCFVV 166
Query: 165 -----------NSMILGLGQNGEVQKARVVFDQMRE---KDDATWSGMIKVYERKGYELE 210
N+++ + G + +AR VF +M E +D+ +W+ MI + +E
Sbjct: 167 VCGHDCYASVNNAVLACYSRKGFLSEARRVFREMGEGGGRDEVSWNAMIVACGQHREGME 226
Query: 211 VIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLIT 270
+ LF M + G++V+ ++ SVL+ + L GRQ H +++ F + +V S LI
Sbjct: 227 AVGLFREMVRRGLKVDMFTMASVLTAFTCVKDLVGGRQFHGMMIKSGFHGNSHVGSGLID 286
Query: 271 MYIKC-GELVKGKLIFDNFASKDIVMWNSIISGYAQY-GLGEKSLKVFHEMFSSGVMPDD 328
+Y KC G +V+ + +F+ + D+V+WN++ISG++ Y L E L F EM +G PDD
Sbjct: 287 LYSKCAGSMVECRKVFEEITAPDLVLWNTMISGFSLYEDLSEDGLWCFREMQRNGFRPDD 346
Query: 329 VTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIE 388
+ V V SACS G+++ + + +V + + G V DA ++ +
Sbjct: 347 CSFVCVTSACSNLSSPSLGKQVHALAIKSDVPYNRVSVNNALVAMYSKCGNVHDARRVFD 406
Query: 389 AMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLE-----PKNAGPYILLSNIYASQ 443
MP E + + S++ H EV + +L +L N+ +I + +
Sbjct: 407 TMP-EHNTVSLNSMIAGYAQHG----VEVESLRLFELMLEKDIAPNSITFIAVLSACVHT 461
Query: 444 GRFHDVAELRKNMRKRNVIKP 464
G+ + + M++R I+P
Sbjct: 462 GKVEEGQKYFNMMKERFCIEP 482
Score = 46.2 bits (108), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 59/124 (47%), Gaps = 4/124 (3%)
Query: 232 SVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASK 291
++L C + L G+ +HA + Y+++ +Y KCG L + F
Sbjct: 14 NLLKACIAQRDLITGKILHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQTSFHLTQYP 73
Query: 292 DIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIF 351
++ +N++I+ YA++ L + +VF E+ PD V+ +++A + G+ +F
Sbjct: 74 NVFSYNTLINAYAKHSLIHIARRVFDEI----PQPDIVSYNTLIAAYADRGECGPTLRLF 129
Query: 352 ESMK 355
E ++
Sbjct: 130 EEVR 133
>gi|357483943|ref|XP_003612258.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513593|gb|AES95216.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 907
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 196/483 (40%), Positives = 311/483 (64%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
+P+ N VSW M+ G+ G I EA LF +MP KNVVSW M+ +++D +ID+A +LF
Sbjct: 230 IPDPNAVSWVTMLCGFARHGKIVEARKLFDRMPCKNVVSWNAMIAAYVQDLQIDEAVKLF 289
Query: 61 DMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARK 120
P KD V+ T M+ GY + G++DE RE++++MP K+V + T ++SG + N RID A +
Sbjct: 290 KETPYKDCVSWTTMINGYVRVGKLDEAREVYNQMPYKDVAAKTALMSGLIQNGRIDEASQ 349
Query: 121 LFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKA 180
+F + +++ + W +M+ GY Q GR+ +A LF+ MP+K+ V+ N+MI G Q GE+ +A
Sbjct: 350 VFSQLNKRDAICWNSMIAGYCQSGRMSEALNLFRQMPVKNAVSWNTMISGYAQAGEMDRA 409
Query: 181 RVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASL 240
+F+ M ++ +W+ +I + + G L+ + LM +EG + + + LS CA+L
Sbjct: 410 TEIFEAMGVRNVISWNSLITGFLQNGLYLDALKSLVLMGQEGKKPDQSTFACSLSSCANL 469
Query: 241 ASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSII 300
A+L G+Q+H +++ + D++V++ LI MY KCG + + +F + D++ WNS+I
Sbjct: 470 AALQVGKQLHELILKSGYINDLFVSNALIAMYAKCGGVQSAEKVFKDIEGVDLISWNSLI 529
Query: 301 SGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLV 360
SGYA G ++ F +M S G +PD+VT +G+LSACS+ G +G ++F+ M + +
Sbjct: 530 SGYALNGYANEAFWAFEQMSSEGTVPDEVTFIGMLSACSHAGLTNQGVDLFKCMIEGFAI 589
Query: 361 EPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAK 420
EP EHY+C+VDLLGR G++E+A ++ M + +A +WGSLL ACR H ++L ++AA
Sbjct: 590 EPLAEHYSCLVDLLGRMGRLEEAFNIVRGMKVKANAGLWGSLLAACRVHKNMELGKIAAL 649
Query: 421 KLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFT 480
+LL+LEP NA YI LSN++A GR+ DV LR MR+R K PGCSWIEV+ ++ F
Sbjct: 650 RLLELEPHNASNYITLSNMHAEAGRWEDVERLRVLMRERRAGKLPGCSWIEVQNQIQNFV 709
Query: 481 GRD 483
D
Sbjct: 710 SDD 712
Score = 212 bits (539), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 122/420 (29%), Positives = 223/420 (53%), Gaps = 21/420 (5%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
M +RN+VSW M+ GY+ M+ EA LF M E++ SW +M+ + R ++ AR LF
Sbjct: 74 MSQRNLVSWNTMIAGYLHNNMVEEAHKLFDLMAERDNFSWALMITCYTRKGMLEKARELF 133
Query: 61 DMMPEK-DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVAR 119
+++P+K D M+ GY + GR D+ ++F++MP K+++S+ +M++GY N ++ +A
Sbjct: 134 ELVPDKLDTACWNAMIAGYAKKGRFDDAEKVFEKMPVKDLVSYNSMLAGYTQNGKMGLAM 193
Query: 120 KLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQK 179
K FE M E+N VSW M+ G+ + AWELF+ +P + V+ +M+ G ++G++ +
Sbjct: 194 KFFERMAERNVVSWNLMVAGFVNNCDLGSAWELFEKIPDPNAVSWVTMLCGFARHGKIVE 253
Query: 180 ARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCAS 239
AR +FD+M K+ +W+ MI Y + E + LF KE + S ++++
Sbjct: 254 ARKLFDRMPCKNVVSWNAMIAAYVQDLQIDEAVKLF----KETPYKDCVSWTTMINGYVR 309
Query: 240 LASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSI 299
+ LD R+V+ Q+ DV + L++ I+ G + + +F +D + WNS+
Sbjct: 310 VGKLDEAREVYNQMPY----KDVAAKTALMSGLIQNGRIDEASQVFSQLNKRDAICWNSM 365
Query: 300 ISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYL 359
I+GY Q G ++L +F +M + + V+ ++S + G++ EIFE+M + +
Sbjct: 366 IAGYCQSGRMSEALNLFRQM----PVKNAVSWNTMISGYAQAGEMDRATEIFEAMGVRNV 421
Query: 360 VEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFE---PDAIIWGSLLGACRTHMKLDLAE 416
+ + ++ + G DA+K + M E PD + L +C L + +
Sbjct: 422 IS-----WNSLITGFLQNGLYLDALKSLVLMGQEGKKPDQSTFACSLSSCANLAALQVGK 476
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 122/447 (27%), Positives = 225/447 (50%), Gaps = 55/447 (12%)
Query: 18 EEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLG 77
++G I EA +F + KN ++ M+ F ++ R+ DAR+LFD M ++++V+ M+ G
Sbjct: 29 KQGKIDEAKRVFSNVIHKNHATYNSMVTVFAKNGRVSDARQLFDKMSQRNLVSWNTMIAG 88
Query: 78 YCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEK-NEVSWTAM 136
Y + V+E ++FD M +++ SW MI+ Y ++ AR+LFE++P+K + W AM
Sbjct: 89 YLHNNMVEEAHKLFDLMAERDNFSWALMITCYTRKGMLEKARELFELVPDKLDTACWNAM 148
Query: 137 LMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWS 196
+ GY + GR DA ++F+ MP+K +V+ NSM+ G QNG++ A F++M E++ +W+
Sbjct: 149 IAGYAKKGRFDDAEKVFEKMPVKDLVSYNSMLAGYTQNGKMGLAMKFFERMAERNVVSWN 208
Query: 197 GMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRC 256
M+ + +LF ++ P+ +S +++ A
Sbjct: 209 LMVAGFVNNCDLGSAWELFE-------KIPDPNAVSWVTMLCGFA--------------- 246
Query: 257 QFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVF 316
+ G++V+ + +FD K++V WN++I+ Y Q ++++K+F
Sbjct: 247 -----------------RHGKIVEARKLFDRMPCKNVVSWNAMIAAYVQDLQIDEAVKLF 289
Query: 317 HEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGR 376
E D V+ +++ GK+ E RE++ M K V KT A M L+ +
Sbjct: 290 KET----PYKDCVSWTTMINGYVRVGKLDEAREVYNQMPYKD-VAAKT---ALMSGLI-Q 340
Query: 377 AGQVEDAMKLIEAMPFEPDAIIWGSLL-GACRTHMKLDLAEVAAKKLLQLEPKNAGPYIL 435
G++++A ++ + + DAI W S++ G C++ + A Q+ KNA +
Sbjct: 341 NGRIDEASQVFSQLN-KRDAICWNSMIAGYCQSGRMSE----ALNLFRQMPVKNAVSWNT 395
Query: 436 LSNIYASQGRFHDVAELRKNMRKRNVI 462
+ + YA G E+ + M RNVI
Sbjct: 396 MISGYAQAGEMDRATEIFEAMGVRNVI 422
>gi|49333391|gb|AAT64030.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 805
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 230/657 (35%), Positives = 365/657 (55%), Gaps = 68/657 (10%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
M ++NV W MV Y + G E+ LF M EK I R + A LF
Sbjct: 160 MEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKG-----------IEGKRPESASELF 208
Query: 61 DMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMP------------------------- 95
D + ++DV++ +M+ GY +G + G I+ +M
Sbjct: 209 DKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLS 268
Query: 96 --------------KKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYT 141
++ + T++ Y +D A ++FE M E+N VSWT+M+ GYT
Sbjct: 269 LGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYT 328
Query: 142 QCGRIQDAWELFKAMPMKSV----VASNSMILGLGQNGEVQKARVVFDQMREKDDAT--- 194
+ G A L + M + V VA S++ ++G + + V D ++ + A+
Sbjct: 329 RDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMASNLF 388
Query: 195 -WSGMIKVYERKGYELEVIDLFTLMQKEGV----------RVNFPSLISVLSVCASLASL 243
+ ++ +Y + G +F+ M + + + + ++ +L CASL++L
Sbjct: 389 VCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVGELKPDSRTMACILPACASLSAL 448
Query: 244 DHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGY 303
+ G+++H ++R + D +VA+ L+ +Y+KCG L +L+FD SKD+V W +I+GY
Sbjct: 449 ERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGY 508
Query: 304 AQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPK 363
+G G +++ F+EM +G+ PD+V+ + +L ACS++G +++G F MK+ + +EPK
Sbjct: 509 GMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPK 568
Query: 364 TEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLL 423
EHYACMVDLL R G + A K IE +P PDA IWG+LL CR + ++LAE A+++
Sbjct: 569 LEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGALLCGCRIYHDIELAEKVAERVF 628
Query: 424 QLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRD 483
+LEP+N G Y+LL+NIYA + +V +R+ + K+ + K PGCSWIE++ +V++F +
Sbjct: 629 ELEPENTGYYVLLANIYAEAEKREEVKRMREKIGKKGLRKNPGCSWIEIKGRVNLFVSGN 688
Query: 484 CVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLV 543
SHP I +L+K+ ++E GY P + + L + DE +K +L HSEKLA+A+GL+
Sbjct: 689 NSSHPHSKKIESLLKKMRRKMKEEGYFPKTKYALINADEMQKEMALCGHSEKLAMAFGLL 748
Query: 544 KLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
LP IRV KNLRVCGDCH K +SK REI+LRD+NRFHHFKDG CSCR +W
Sbjct: 749 TLPPRKTIRVTKNLRVCGDCHEMAKFMSKETRREIVLRDSNRFHHFKDGYCSCRGFW 805
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 100/388 (25%), Positives = 182/388 (46%), Gaps = 57/388 (14%)
Query: 53 IDDARRLFDMMPEKDVVAQTNMVLGYCQDG--------------------RVDEGREIFD 92
+ + RR+FD M +K+V MV Y + G R + E+FD
Sbjct: 150 LKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESASELFD 209
Query: 93 EMPKKNVISWTTMISGYVNNNRIDVARKLFEVM----PEKNEVSWTAMLMGYTQCGRIQD 148
++ ++VISW +MISGYV+N + +++ M + + + ++L+G G +
Sbjct: 210 KLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSL 269
Query: 149 AWELFKAMPMKS-----VVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYE 203
+ ++ +KS + SN+++ + G++ A VF++M E++ +W+ MI Y
Sbjct: 270 G-KAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYT 328
Query: 204 RKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVY 263
R G+ I L M+KEGV+++ ++ S+L CA SLD+G+ VH + +++
Sbjct: 329 RDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMASNLF 388
Query: 264 VASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSG 323
V + L+ MY KCG + +F KDI+ WN+++ GE
Sbjct: 389 VCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMV--------GE------------- 427
Query: 324 VMPDDVTLVGVLSACSYTGKVKEGREIFES-MKSKYLVEPKTEHYA-CMVDLLGRAGQVE 381
+ PD T+ +L AC+ ++ G+EI +++ Y H A +VDL + G +
Sbjct: 428 LKPDSRTMACILPACASLSALERGKEIHGYILRNGY---SSDRHVANALVDLYVKCGVLG 484
Query: 382 DAMKLIEAMPFEPDAIIWGSLLGACRTH 409
A L + +P D + W ++ H
Sbjct: 485 LARLLFDMIP-SKDLVSWTVMIAGYGMH 511
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 98/225 (43%), Gaps = 53/225 (23%)
Query: 232 SVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFD----- 286
SVL +CA L SL G++VH+ + VD + L++ Y CG+L +G+ +FD
Sbjct: 104 SVLQLCAGLKSLTDGKKVHSIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTMEKK 163
Query: 287 -----NF-----------------------------------------ASKDIVMWNSII 300
NF +D++ WNS+I
Sbjct: 164 NVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWNSMI 223
Query: 301 SGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLV 360
SGY GL E+ L ++ +M G+ D T++ VL C+ +G + G+ + S+ K
Sbjct: 224 SGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAV-HSLAIKSSF 282
Query: 361 EPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
E + ++D+ + G ++ A+++ E M E + + W S++
Sbjct: 283 ERRINFSNTLLDMYSKCGDLDGALRVFEKMG-ERNVVSWTSMIAG 326
>gi|18483237|gb|AAL73981.1|AF466201_10 putative vegetative storage protein [Sorghum bicolor]
Length = 779
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 228/643 (35%), Positives = 359/643 (55%), Gaps = 66/643 (10%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MP R+VV+W AM+ GY GM A M ++ G +R +A L
Sbjct: 160 MPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDR----------GGLRP----NASTLV 205
Query: 61 DMMP---EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDV 117
++P + + Q V YC +D+ E V+ T ++ Y +
Sbjct: 206 SLLPLLAQHGALFQGTSVHAYCLRAYLDQNEE--------QVLIGTALLDMYAKCKHLVY 257
Query: 118 ARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKS----------------- 160
A ++F M +NEV+W+A++ G+ C R+ +A+ LFK M ++
Sbjct: 258 ACRVFHGMTVRNEVTWSALIGGFVLCDRMTEAFNLFKDMLVEGMCFLSATSVASALRVCA 317
Query: 161 -----------------------VVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSG 197
+ A NS++ + G + +A ++FD++ KD ++
Sbjct: 318 SLADLRMGTQLHALLAKSGIHADLTAGNSLLSMYAKAGLINEATMLFDEIAIKDTISYGA 377
Query: 198 MIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQ 257
++ Y + G E +F MQ V+ + +++S++ C+ LA+L HGR H ++
Sbjct: 378 LLSGYVQNGKAEEAFLVFKKMQACNVQPDIATMVSLIPACSHLAALQHGRCSHGSVIIRG 437
Query: 258 FDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFH 317
++ + + LI MY KCG + + +FD ++DIV WN++I+GY +GLG+++ +F
Sbjct: 438 LALETSICNSLIDMYAKCGRIDLSRQVFDKMPARDIVSWNTMIAGYGIHGLGKEATTLFL 497
Query: 318 EMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRA 377
M + G PDDVT + +++ACS++G V EG+ F++M KY + P+ EHY CMVDLL R
Sbjct: 498 SMKNQGFEPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARG 557
Query: 378 GQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLS 437
G +++A + I++MP + D +WG+LLGACR H +DL + ++ + +L P+ G ++LLS
Sbjct: 558 GFLDEAYQFIQSMPLKADVRVWGALLGACRIHKNIDLGKQVSRMIQKLGPEGTGNFVLLS 617
Query: 438 NIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRML 497
NI+++ GRF + AE+R + + K PGCSWIE+ +H F G D SHP P I L
Sbjct: 618 NIFSAAGRFDEAAEVRIIQKVKGFKKSPGCSWIEINGSLHAFVGGD-QSHPCSPDIYHEL 676
Query: 498 EKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNL 557
+ I +++ GY D+SFVL D++EEEK +L YHSEKLA+A+G++ L E I V KNL
Sbjct: 677 DNILIDIKKLGYQADTSFVLQDLEEEEKEKALLYHSEKLAIAFGVLSLNEDKTIFVTKNL 736
Query: 558 RVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
RVCGDCH+AIK ++ V R II+RDANRFHHFK+G CSC D+W
Sbjct: 737 RVCGDCHTAIKYMTLVRNRTIIVRDANRFHHFKNGQCSCGDFW 779
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 112/233 (48%), Gaps = 4/233 (1%)
Query: 175 GEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVL 234
G++ AR VFD++ D ++ +I+ Y +G IDL+ M V N + VL
Sbjct: 47 GQLALARQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSMLYFRVPPNKYTFPFVL 106
Query: 235 SVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIV 294
C++LA L GR +HA D++V++ LI +YI+C +F +D+V
Sbjct: 107 KACSALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAANVFAKMPMRDVV 166
Query: 295 MWNSIISGYAQYGLGEKSLKVFHEMFS-SGVMPDDVTLVGVLSACSYTGKVKEGREIFES 353
WN++++GYA +G+ ++ +M G+ P+ TLV +L + G + +G +
Sbjct: 167 AWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGALFQGTSVHAY 226
Query: 354 MKSKYLVEPKTEHY--ACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLG 404
YL + + + ++D+ + + A ++ M + + W +L+G
Sbjct: 227 CLRAYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVR-NEVTWSALIG 278
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 59/140 (42%), Gaps = 6/140 (4%)
Query: 272 YIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTL 331
+I G+L + +FD + D +N++I Y+ G ++ ++ M V P+ T
Sbjct: 43 HIARGQLALARQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSMLYFRVPPNKYTF 102
Query: 332 VGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHY--ACMVDLLGRAGQVEDAMKLIEA 389
VL ACS + GR I + V T+ + ++DL R + A +
Sbjct: 103 PFVLKACSALADLCAGRTIHAHAAA---VGLHTDLFVSTALIDLYIRCARFGPAANVFAK 159
Query: 390 MPFEPDAIIWGSLLGACRTH 409
MP D + W ++L H
Sbjct: 160 MPMR-DVVAWNAMLAGYANH 178
>gi|449440243|ref|XP_004137894.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 427 bits (1097), Expect = e-117, Method: Compositional matrix adjust.
Identities = 238/628 (37%), Positives = 350/628 (55%), Gaps = 48/628 (7%)
Query: 20 GMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQT---NMVL 76
G + +F Q+ E N+ W M+ G + DDA L+ M + VL
Sbjct: 62 GSTNYSKLVFSQVKEPNIFLWNTMIRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVL 121
Query: 77 GYC-QDGRVDEGREIFDEMPK----KNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEV 131
C + V G +I + K +V T+++S YV + D A K+F+ +P+KN V
Sbjct: 122 KACARKLDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVV 181
Query: 132 SWTAMLMGYTQCGRIQDAWELFK----------AMPMKSVVASNSMI------------- 168
SWTA++ GY G ++A FK + + V+A+ + +
Sbjct: 182 SWTAIITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYI 241
Query: 169 --LGLGQN--------------GEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVI 212
G+G+N G +++A ++F M EKD +WS MI+ Y G + +
Sbjct: 242 SDSGMGRNVFVATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQAL 301
Query: 213 DLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMY 272
DLF MQ E ++ + +++ VLS CA+L +LD G + + R +F + + + LI MY
Sbjct: 302 DLFFQMQSENLKPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLGTALIDMY 361
Query: 273 IKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLV 332
KCG + + IF KD V+WN+++ G + G + +F + G+ PD+ T +
Sbjct: 362 SKCGSVTQAWEIFTAMKRKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFI 421
Query: 333 GVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPF 392
G+L C++ G V EGR+ F +MK + + P EHY CMVDLLGRAG + +A +LI MP
Sbjct: 422 GLLCGCTHGGFVNEGRQFFNNMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINNMPM 481
Query: 393 EPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAEL 452
+P+A++WG+LLG C+ H LAE KKL++LEP N+G Y+ LSNIY+ R+ + ++
Sbjct: 482 KPNAVVWGALLGGCKLHKDTHLAEQVLKKLIELEPWNSGNYVQLSNIYSGNHRWEEAEKI 541
Query: 453 RKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPD 512
R M+++ + K CSWIE++ VH F D SH I L+++G L+ G+ P
Sbjct: 542 RSTMKEQQIQKIRACSWIEIDGIVHEFLVGD-KSHWLSEKIYAKLDELGRELKAVGHVPT 600
Query: 513 SSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISK 572
+ FVL D++EEEK H L YHSEKLAVA+GL+ P IRV+KNLRVCGDCH AIKLISK
Sbjct: 601 TEFVLFDIEEEEKEHFLGYHSEKLAVAFGLIASPPNHVIRVVKNLRVCGDCHDAIKLISK 660
Query: 573 VMGREIILRDANRFHHFKDGLCSCRDYW 600
+ REII+RD NRFH F DG CSCRDYW
Sbjct: 661 ITKREIIIRDTNRFHTFIDGSCSCRDYW 688
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 92/373 (24%), Positives = 153/373 (41%), Gaps = 87/373 (23%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKN----------VVSWTVMLGGFIRD 50
+P++NVVSWTA++ GY+ G EA F ++ E V++ LG
Sbjct: 175 IPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSG 234
Query: 51 SRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYV 110
ID R + D ++V T+++ Y + G ++ IF MP+K+++SW+TMI GY
Sbjct: 235 EWID--RYISDSGMGRNVFVATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYA 292
Query: 111 NNNRIDVARKLFEVMPEK---------------------------------------NEV 131
N A LF M + N V
Sbjct: 293 FNGLPQQALDLFFQMQSENLKPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPV 352
Query: 132 SWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKD 191
TA++ Y++CG + AWE+F AM K V N+M++GL NG A+ VF
Sbjct: 353 LGTALIDMYSKCGSVTQAWEIFTAMKRKDRVVWNAMMVGLSMNGH---AKAVF------- 402
Query: 192 DATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHA 251
LF+L++K G+R + + I +L C ++ GRQ
Sbjct: 403 ---------------------SLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQFFN 441
Query: 252 QLVRC-QFDVDVYVASVLITMYIKCGELVKGKLIFDNFASK-DIVMWNSIISG---YAQY 306
+ R + ++ + + G L + + +N K + V+W +++ G +
Sbjct: 442 NMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGGCKLHKDT 501
Query: 307 GLGEKSLKVFHEM 319
L E+ LK E+
Sbjct: 502 HLAEQVLKKLIEL 514
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 89/186 (47%), Gaps = 10/186 (5%)
Query: 247 RQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQY 306
+ +HA+L+R D D Y+ ++++ + G KL+F +I +WN++I G
Sbjct: 33 KHIHARLLRLHLDQDNYLLNLILCCALDFGSTNYSKLVFSQVKEPNIFLWNTMIRGLVSK 92
Query: 307 GLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEH 366
+ ++ ++ M G +P++ T+ VL AC+ V+ G +I LV+ +H
Sbjct: 93 DCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKI-----HSLLVKAGYDH 147
Query: 367 ----YACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKL 422
++ L + +DA+K+ + +P + + + W +++ + A A KKL
Sbjct: 148 DVFVKTSLLSLYVKCDNFDDALKVFDDIP-DKNVVSWTAIITGYISSGHFREAIGAFKKL 206
Query: 423 LQLEPK 428
L++ K
Sbjct: 207 LEMGLK 212
>gi|449530632|ref|XP_004172298.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 427 bits (1097), Expect = e-116, Method: Compositional matrix adjust.
Identities = 238/628 (37%), Positives = 350/628 (55%), Gaps = 48/628 (7%)
Query: 20 GMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQT---NMVL 76
G + +F Q+ E N+ W M+ G + DDA L+ M + VL
Sbjct: 62 GSTNYSKLVFSQVKEPNIFLWNTMIRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVL 121
Query: 77 GYC-QDGRVDEGREIFDEMPK----KNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEV 131
C + V G +I + K +V T+++S YV + D A K+F+ +P+KN V
Sbjct: 122 KACARKLDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVV 181
Query: 132 SWTAMLMGYTQCGRIQDAWELFK----------AMPMKSVVASNSMI------------- 168
SWTA++ GY G ++A FK + + V+A+ + +
Sbjct: 182 SWTAIITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYI 241
Query: 169 --LGLGQN--------------GEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVI 212
G+G+N G +++A ++F M EKD +WS MI+ Y G + +
Sbjct: 242 SDSGMGRNVFVATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQAL 301
Query: 213 DLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMY 272
DLF MQ E ++ + +++ VLS CA+L +LD G + + R +F + + + LI MY
Sbjct: 302 DLFFQMQSENLKPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLGTALIDMY 361
Query: 273 IKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLV 332
KCG + + IF KD V+WN+++ G + G + +F + G+ PD+ T +
Sbjct: 362 SKCGSVTQAWEIFTAMKKKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFI 421
Query: 333 GVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPF 392
G+L C++ G V EGR+ F +MK + + P EHY CMVDLLGRAG + +A +LI MP
Sbjct: 422 GLLCGCTHGGFVNEGRQFFNNMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINNMPM 481
Query: 393 EPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAEL 452
+P+A++WG+LLG C+ H LAE KKL++LEP N+G Y+ LSNIY+ R+ + ++
Sbjct: 482 KPNAVVWGALLGGCKLHKDTHLAEQVLKKLIELEPWNSGNYVQLSNIYSGNHRWEEAEKI 541
Query: 453 RKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPD 512
R M+++ + K CSWIE++ VH F D SH I L+++G L+ G+ P
Sbjct: 542 RSTMKEQQIQKIRACSWIEIDGIVHEFLVGD-KSHWLSEKIYAKLDELGRELKAVGHVPT 600
Query: 513 SSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISK 572
+ FVL D++EEEK H L YHSEKLAVA+GL+ P IRV+KNLRVCGDCH AIKLISK
Sbjct: 601 TEFVLFDIEEEEKEHFLGYHSEKLAVAFGLIASPPNHVIRVVKNLRVCGDCHDAIKLISK 660
Query: 573 VMGREIILRDANRFHHFKDGLCSCRDYW 600
+ REII+RD NRFH F DG CSCRDYW
Sbjct: 661 ITKREIIIRDTNRFHTFIDGSCSCRDYW 688
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 92/373 (24%), Positives = 153/373 (41%), Gaps = 87/373 (23%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKN----------VVSWTVMLGGFIRD 50
+P++NVVSWTA++ GY+ G EA F ++ E V++ LG
Sbjct: 175 IPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSG 234
Query: 51 SRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYV 110
ID R + D ++V T+++ Y + G ++ IF MP+K+++SW+TMI GY
Sbjct: 235 EWID--RYISDSGMGRNVFVATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYA 292
Query: 111 NNNRIDVARKLFEVMPEK---------------------------------------NEV 131
N A LF M + N V
Sbjct: 293 FNGLPQQALDLFFQMQSENLKPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPV 352
Query: 132 SWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKD 191
TA++ Y++CG + AWE+F AM K V N+M++GL NG A+ VF
Sbjct: 353 LGTALIDMYSKCGSVTQAWEIFTAMKKKDRVVWNAMMVGLSMNGH---AKAVF------- 402
Query: 192 DATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHA 251
LF+L++K G+R + + I +L C ++ GRQ
Sbjct: 403 ---------------------SLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQFFN 441
Query: 252 QLVRC-QFDVDVYVASVLITMYIKCGELVKGKLIFDNFASK-DIVMWNSIISG---YAQY 306
+ R + ++ + + G L + + +N K + V+W +++ G +
Sbjct: 442 NMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGGCKLHKDT 501
Query: 307 GLGEKSLKVFHEM 319
L E+ LK E+
Sbjct: 502 HLAEQVLKKLIEL 514
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 89/186 (47%), Gaps = 10/186 (5%)
Query: 247 RQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQY 306
+ +HA+L+R D D Y+ ++++ + G KL+F +I +WN++I G
Sbjct: 33 KHIHARLLRLHLDQDNYLLNLILCCALDFGSTNYSKLVFSQVKEPNIFLWNTMIRGLVSK 92
Query: 307 GLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEH 366
+ ++ ++ M G +P++ T+ VL AC+ V+ G +I LV+ +H
Sbjct: 93 DCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKI-----HSLLVKAGYDH 147
Query: 367 ----YACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKL 422
++ L + +DA+K+ + +P + + + W +++ + A A KKL
Sbjct: 148 DVFVKTSLLSLYVKCDNFDDALKVFDDIP-DKNVVSWTAIITGYISSGHFREAIGAFKKL 206
Query: 423 LQLEPK 428
L++ K
Sbjct: 207 LEMGLK 212
>gi|15226200|ref|NP_180329.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216862|sp|Q9ZUW3.1|PP172_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g27610
gi|3860271|gb|AAC73039.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|330252926|gb|AEC08020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 868
Score = 427 bits (1097), Expect = e-116, Method: Compositional matrix adjust.
Identities = 229/614 (37%), Positives = 362/614 (58%), Gaps = 20/614 (3%)
Query: 4 RNVVSWTAMVRGYVEEGMITEAGTLFWQMP------EKNVVSWTVMLGGFIRDSRIDDAR 57
++VV+W +M+ GY G+ EA +F+ M ++ + + L +++ R +
Sbjct: 258 KSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQL 317
Query: 58 RL----FDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMP-KKNVISWTTMISGYVNN 112
+ + ++++ +T +++ Y + + + +F E+ NV+SWT MISG++ N
Sbjct: 318 HCSVVKYGFLFDQNI--RTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQN 375
Query: 113 NRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMI 168
+ + A LF M K NE +++ +L + ++ K +S +++
Sbjct: 376 DGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSEVHAQVVKTNYERSSTVGTALL 435
Query: 169 LGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFP 228
+ G+V++A VF + +KD WS M+ Y + G I +F + K G++ N
Sbjct: 436 DAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEF 495
Query: 229 SLISVLSVCASL-ASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDN 287
+ S+L+VCA+ AS+ G+Q H ++ + D + V+S L+TMY K G + + +F
Sbjct: 496 TFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKR 555
Query: 288 FASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEG 347
KD+V WNS+ISGYAQ+G K+L VF EM V D VT +GV +AC++ G V+EG
Sbjct: 556 QREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEG 615
Query: 348 REIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACR 407
+ F+ M + P EH +CMVDL RAGQ+E AMK+IE MP + IW ++L ACR
Sbjct: 616 EKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACR 675
Query: 408 THMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGC 467
H K +L +AA+K++ ++P+++ Y+LLSN+YA G + + A++RK M +RNV K PG
Sbjct: 676 VHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGY 735
Query: 468 SWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVH 527
SWIEV+ K + F D SHP I LE + L++ GY PD+S+VL D+D+E K
Sbjct: 736 SWIEVKNKTYSFLAGD-RSHPLKDQIYMKLEDLSTRLKDLGYEPDTSYVLQDIDDEHKEA 794
Query: 528 SLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFH 587
L HSE+LA+A+GL+ P+G P+ ++KNLRVCGDCH IKLI+K+ REI++RD+NRFH
Sbjct: 795 VLAQHSERLAIAFGLIATPKGSPLLIIKNLRVCGDCHLVIKLIAKIEEREIVVRDSNRFH 854
Query: 588 HF-KDGLCSCRDYW 600
HF DG+CSC D+W
Sbjct: 855 HFSSDGVCSCGDFW 868
Score = 158 bits (400), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 118/439 (26%), Positives = 202/439 (46%), Gaps = 54/439 (12%)
Query: 15 GYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPE--------- 65
G V + A LF + P ++ S+ +L GF RD R +A+RLF +
Sbjct: 36 GTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSI 95
Query: 66 ------------------------------KDVVAQTNMVLGYCQDGRVDEGREIFDEMP 95
DV T++V Y + +GR++FDEM
Sbjct: 96 FSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMK 155
Query: 96 KKNVISWTTMISGYVNNNRIDVARKLFEVM----PEKNEVSWTAMLMGYTQCG----RIQ 147
++NV++WTT+ISGY N+ D LF M + N ++ A L + G +Q
Sbjct: 156 ERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQ 215
Query: 148 DAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGY 207
+ K K++ SNS+I + G V+KAR++FD+ K TW+ MI Y G
Sbjct: 216 VHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGL 275
Query: 208 ELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASV 267
+LE + +F M+ VR++ S SV+ +CA+L L Q+H +V+ F D + +
Sbjct: 276 DLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTA 335
Query: 268 LITMYIKCGELVKGKLIFDNFAS-KDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMP 326
L+ Y KC ++ +F ++V W ++ISG+ Q E+++ +F EM GV P
Sbjct: 336 LMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRP 395
Query: 327 DDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKL 386
++ T +L+A + ++ +K+ Y E + ++D + G+VE+A K+
Sbjct: 396 NEFTYSVILTALPVISPSEVHAQV---VKTNY--ERSSTVGTALLDAYVKLGKVEEAAKV 450
Query: 387 IEAMPFEPDAIIWGSLLGA 405
+ + D + W ++L
Sbjct: 451 FSGID-DKDIVAWSAMLAG 468
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 107/457 (23%), Positives = 202/457 (44%), Gaps = 84/457 (18%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM----PEKNVVSWTVMLGGFIRDSRIDDA 56
M ERNVV+WT ++ GY M E TLF +M + N ++ LG +
Sbjct: 154 MKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRG 213
Query: 57 RRLFDMMP----EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
++ ++ +K + +++ Y + G V + R +FD+ K+V++W +MISGY N
Sbjct: 214 LQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAAN 273
Query: 113 N------------RIDVAR-------KLFEVMPEKNEVSW-------------------- 133
R++ R + ++ E+ +
Sbjct: 274 GLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIR 333
Query: 134 TAMLMGYTQCGRIQDAWELFKAMP-MKSVVASNSMILGLGQNGEVQKARVVFDQMREKDD 192
TA+++ Y++C + DA LFK + + +VV+ +MI G QN
Sbjct: 334 TALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQN------------------ 375
Query: 193 ATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQ 252
G E E +DLF+ M+++GVR N + +L+ ++ +VHAQ
Sbjct: 376 ------------DGKE-EAVDLFSEMKRKGVRPNEFTYSVILTALPVISP----SEVHAQ 418
Query: 253 LVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKS 312
+V+ ++ V + L+ Y+K G++ + +F KDIV W+++++GYAQ G E +
Sbjct: 419 VVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAA 478
Query: 313 LKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVD 372
+K+F E+ G+ P++ T +L+ C+ T + F K ++ + ++
Sbjct: 479 IKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLT 538
Query: 373 LLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTH 409
+ + G +E A ++ + E D + W S++ H
Sbjct: 539 MYAKKGNIESAEEVFKRQR-EKDLVSWNSMISGYAQH 574
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/344 (25%), Positives = 162/344 (47%), Gaps = 10/344 (2%)
Query: 69 VAQTNM-VLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEV--- 124
VAQ + G R+ +FD+ P ++ S+ +++ G+ + R A++LF
Sbjct: 27 VAQVRIYCFGTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHR 86
Query: 125 --MPEKNEVSWTAMLMGYTQCGRI---QDAWELFKAMPMKSVVASNSMILGLGQNGEVQK 179
M + + + + T C + Q + K + V S++ + +
Sbjct: 87 LGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKD 146
Query: 180 ARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCAS 239
R VFD+M+E++ TW+ +I Y R EV+ LF MQ EG + N + + L V A
Sbjct: 147 GRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAE 206
Query: 240 LASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSI 299
G QVH +V+ D + V++ LI +Y+KCG + K +++FD K +V WNS+
Sbjct: 207 EGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSM 266
Query: 300 ISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYL 359
ISGYA GL ++L +F+ M + V + + V+ C+ +++ ++ S+
Sbjct: 267 ISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGF 326
Query: 360 VEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
+ + A MV + + DA++L + + + + W +++
Sbjct: 327 LFDQNIRTALMV-AYSKCTAMLDALRLFKEIGCVGNVVSWTAMI 369
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 105/226 (46%), Gaps = 26/226 (11%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDM 62
ER+ TA++ YV+ G + EA +F + +K++V+W+ ML G+ + + A ++F
Sbjct: 425 ERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGE 484
Query: 63 MPEK-------------DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGY 109
+ + +V A TN +G G+ G I + +S + +++ Y
Sbjct: 485 LTKGGIKPNEFTFSSILNVCAATNASMG---QGKQFHGFAIKSRLDSSLCVS-SALLTMY 540
Query: 110 VNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMIL 169
I+ A ++F+ EK+ VSW +M+ GY Q G+ A ++FK M + V +
Sbjct: 541 AKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFI 600
Query: 170 GL----GQNGEVQKARVVFDQM-REKDDATW----SGMIKVYERKG 206
G+ G V++ FD M R+ A S M+ +Y R G
Sbjct: 601 GVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAG 646
>gi|357167803|ref|XP_003581340.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Brachypodium distachyon]
Length = 940
Score = 427 bits (1097), Expect = e-116, Method: Compositional matrix adjust.
Identities = 227/642 (35%), Positives = 356/642 (55%), Gaps = 50/642 (7%)
Query: 7 VSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMM--- 63
+ A++ Y + G + A +F ++ EK+ +SW ML ++++ +A M
Sbjct: 301 IQCNALLVMYTKCGRVDSALRVFREIDEKDYISWNSMLSCYVQNGLYAEAIEFISEMLRG 360
Query: 64 ---PEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWT----TMISGYVNNNRID 116
P+ + + +G+ G + G+E+ K+ + S T T++ Y+ I+
Sbjct: 361 GFQPDHACIVSLSSAVGHL--GWLLNGKEVHAYAIKQRLDSDTQVGNTLMDMYMKCRYIE 418
Query: 117 VARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELF--------KAMPMK--------- 159
+ +F+ M K+ +SWT ++ Y Q R +A E+F K PM
Sbjct: 419 YSAHVFDRMRIKDHISWTTIITCYAQSSRHIEALEIFREAQKEGIKVDPMMIGSILEACS 478
Query: 160 ---------------------SVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGM 198
+V N +I G+ GEV + +F+ + +KD TW+ M
Sbjct: 479 GLETILLAKQLHCYAIRNGLLDLVVKNRIIDIYGECGEVYHSLKMFETVEQKDIVTWTSM 538
Query: 199 IKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQF 258
I Y G E + LF MQ V+ + +L+S+L L+SL G++VH L+R F
Sbjct: 539 INCYANSGLLNEALVLFAEMQSTDVQPDSVALVSILGAIGGLSSLAKGKEVHGFLIRRNF 598
Query: 259 DVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHE 318
++ + S L+ MY CG L +F+ KD+V+W ++I+ +G G++++ +F
Sbjct: 599 HMEEAIVSSLVDMYSGCGSLSGALKVFNAVKCKDMVLWTAMINATGMHGHGKQAIDLFKR 658
Query: 319 MFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAG 378
M +GV PD V+ + +L ACS++ V EG+ + M S Y +EP EHYAC+VDLLGR+G
Sbjct: 659 MLQTGVTPDHVSFLALLYACSHSKLVNEGKCYLDMMMSTYRLEPWQEHYACVVDLLGRSG 718
Query: 379 QVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSN 438
Q E+A + I++MP +P +++W SLLGACR H +LA VAA +LL+LEP N G Y+L+SN
Sbjct: 719 QTEEAYEFIKSMPLKPKSVVWCSLLGACRVHKNHELAVVAANRLLELEPDNPGNYVLVSN 778
Query: 439 IYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLE 498
++A G++++ E+R + +R + K P CSWIE+ VH FT RD + +++ E
Sbjct: 779 VFAEMGKWNNAKEVRARISERGLRKDPACSWIEIGNNVHTFTTRDNSHRDAERINLKLAE 838
Query: 499 KIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLR 558
L +E GY D+ VLHDV EEEKV L HSE+LA+++GL+ G+P+R+ KNLR
Sbjct: 839 ITERLRKEGGYTEDTRSVLHDVSEEEKVDVLHRHSERLAISFGLINTRPGMPLRIAKNLR 898
Query: 559 VCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
VCGDCH KL+SK+ R+I++RDANRFHHF G CSC D+W
Sbjct: 899 VCGDCHEFTKLVSKLFDRDIVVRDANRFHHFSGGSCSCGDFW 940
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 102/423 (24%), Positives = 193/423 (45%), Gaps = 24/423 (5%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM---------PEKNVVSWTVMLGGFIRDS 51
M R V SW A++ Y+ G EA ++ M P+ ++ + G D
Sbjct: 121 MSSRTVFSWNALIGAYLSSGSACEALGVYRAMRLSAASGVAPDGCTLASVLKASGVEGDG 180
Query: 52 RIDDARRLFDMMP--EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPK-KNVISWTTMISG 108
R + ++ ++ Y + G +D +F+ M ++V SW +MISG
Sbjct: 181 RCGCEVHGLAVKHGLDRSTFVANALIAMYAKCGILDSAMRVFELMHDGRDVASWNSMISG 240
Query: 109 YVNNNRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKS---- 160
+ N A LF M N + +L T+ ++ EL A+ +KS
Sbjct: 241 CLQNGMFLQALDLFRGMQRAVLSMNSYTTVGVLQVCTELAQLNLGRELHAAL-LKSGSEV 299
Query: 161 VVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQK 220
+ N++++ + G V A VF ++ EKD +W+ M+ Y + G E I+ + M +
Sbjct: 300 NIQCNALLVMYTKCGRVDSALRVFREIDEKDYISWNSMLSCYVQNGLYAEAIEFISEMLR 359
Query: 221 EGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVK 280
G + + ++S+ S L L +G++VHA ++ + D D V + L+ MY+KC +
Sbjct: 360 GGFQPDHACIVSLSSAVGHLGWLLNGKEVHAYAIKQRLDSDTQVGNTLMDMYMKCRYIEY 419
Query: 281 GKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSY 340
+FD KD + W +II+ YAQ ++L++F E G+ D + + +L ACS
Sbjct: 420 SAHVFDRMRIKDHISWTTIITCYAQSSRHIEALEIFREAQKEGIKVDPMMIGSILEACSG 479
Query: 341 TGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWG 400
+ +++ L++ ++ ++D+ G G+V ++K+ E + + D + W
Sbjct: 480 LETILLAKQLHCYAIRNGLLDLVVKNR--IIDIYGECGEVYHSLKMFETVE-QKDIVTWT 536
Query: 401 SLL 403
S++
Sbjct: 537 SMI 539
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 99/385 (25%), Positives = 186/385 (48%), Gaps = 21/385 (5%)
Query: 67 DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVM- 125
D T ++ Y + GRV + R +FD M + V SW +I Y+++ A ++ M
Sbjct: 94 DGFLATKLLFMYGKCGRVADARLLFDGMSSRTVFSWNALIGAYLSSGSACEALGVYRAMR 153
Query: 126 --------PEK---NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQN 174
P+ V + + G +CG + + + VA N++I +
Sbjct: 154 LSAASGVAPDGCTLASVLKASGVEGDGRCGCEVHGLAVKHGLDRSTFVA-NALIAMYAKC 212
Query: 175 GEVQKARVVFDQMRE-KDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISV 233
G + A VF+ M + +D A+W+ MI + G L+ +DLF MQ+ + +N + + V
Sbjct: 213 GILDSAMRVFELMHDGRDVASWNSMISGCLQNGMFLQALDLFRGMQRAVLSMNSYTTVGV 272
Query: 234 LSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDI 293
L VC LA L+ GR++HA L++ +V++ ++L+ MY KCG + +F KD
Sbjct: 273 LQVCTELAQLNLGRELHAALLKSGSEVNIQCNALLV-MYTKCGRVDSALRVFREIDEKDY 331
Query: 294 VMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFES 353
+ WNS++S Y Q GL ++++ EM G PD +V + SA + G + G+E+ +
Sbjct: 332 ISWNSMLSCYVQNGLYAEAIEFISEMLRGGFQPDHACIVSLSSAVGHLGWLLNGKEV-HA 390
Query: 354 MKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLG----ACRTH 409
K ++ T+ ++D+ + +E + + + M + D I W +++ + R
Sbjct: 391 YAIKQRLDSDTQVGNTLMDMYMKCRYIEYSAHVFDRMRIK-DHISWTTIITCYAQSSRHI 449
Query: 410 MKLDLAEVAAKKLLQLEPKNAGPYI 434
L++ A K+ ++++P G +
Sbjct: 450 EALEIFREAQKEGIKVDPMMIGSIL 474
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 91/180 (50%), Gaps = 8/180 (4%)
Query: 233 VLSVCASLASLDHGRQVHAQLVRC---QFDVDVYVASVLITMYIKCGELVKGKLIFDNFA 289
VL + A+ ++ G QVHA V + D D ++A+ L+ MY KCG + +L+FD +
Sbjct: 64 VLDLVAAKKAVAQGVQVHAHAVATGSLEGD-DGFLATKLLFMYGKCGRVADARLLFDGMS 122
Query: 290 SKDIVMWNSIISGYAQYGLGEKSLKVFHEM---FSSGVMPDDVTLVGVLSACSYTGKVKE 346
S+ + WN++I Y G ++L V+ M +SGV PD TL VL A G +
Sbjct: 123 SRTVFSWNALIGAYLSSGSACEALGVYRAMRLSAASGVAPDGCTLASVLKASGVEGDGRC 182
Query: 347 GREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGAC 406
G E+ + K+ ++ T ++ + + G ++ AM++ E M D W S++ C
Sbjct: 183 GCEV-HGLAVKHGLDRSTFVANALIAMYAKCGILDSAMRVFELMHDGRDVASWNSMISGC 241
>gi|449520333|ref|XP_004167188.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Cucumis sativus]
Length = 678
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 228/606 (37%), Positives = 350/606 (57%), Gaps = 21/606 (3%)
Query: 12 MVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMM------PE 65
++R Y +G + A +F + EKNVV + VM+ ++ ++ +A +F +M P+
Sbjct: 77 LMRAYSAQGETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVMLSCAFNPD 136
Query: 66 KDVVAQTNMVLGYCQD-GRVDEGREIFDEMPK----KNVISWTTMISGYVNNNRIDVARK 120
VL C + G ++ D + K N+ +++ Y + ARK
Sbjct: 137 HYTFP---CVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARK 193
Query: 121 LFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSV------VASNSMILGLGQN 174
+ + MP ++ VSW +M+ GY Q G+ DA E+ K M ++ +AS S ++
Sbjct: 194 VLDQMPYRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMASLSPVVCYTSL 253
Query: 175 GEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVL 234
VQ +F++M +K+ +W+ MI +Y E + LF M++ G++ + ++ S+L
Sbjct: 254 ENVQYIHNMFERMTKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLL 313
Query: 235 SVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIV 294
C L++L GR++H + + ++ + + L+ MY KCG L + + +FD +D+V
Sbjct: 314 PACGDLSALFLGRRLHKYIEKGNLQPNLLLENALLDMYAKCGCLEEARDVFDKMRLRDVV 373
Query: 295 MWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESM 354
W S++S Y + G G ++ +F +M SG PD + V VLSACS+TG + +GR F M
Sbjct: 374 SWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVLSACSHTGLLDQGRHYFRMM 433
Query: 355 KSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDL 414
+Y + P+ EH+ACMVDL GRAG+VE+A I+ MP EP+ +WG+LL ACR H K+D+
Sbjct: 434 TEQYGIVPRIEHFACMVDLFGRAGEVEEAYSFIKQMPMEPNERVWGALLSACRVHSKMDI 493
Query: 415 AEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEK 474
VAA L QL PK +G Y+LLSNIYA G + DV +R M+K + K PG S +E+
Sbjct: 494 GLVAADLLFQLAPKQSGYYVLLSNIYAKAGMWKDVMNVRYAMKKIGIKKVPGISNVELNG 553
Query: 475 KVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSE 534
+VH F D HP+ I L+ + G ++E GY P + LHDV+ E+K L HSE
Sbjct: 554 QVHTFLAGD-QYHPQAKNIYGELDVLVGKMKELGYIPQTESALHDVEVEDKECHLAIHSE 612
Query: 535 KLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLC 594
KLA+ + ++ +G PIR+ KNLRVCGDCH AIKLISK++ R II+RD NRFHHF +G+C
Sbjct: 613 KLAIVFAILNTKQGTPIRITKNLRVCGDCHIAIKLISKIVSRNIIVRDCNRFHHFSNGIC 672
Query: 595 SCRDYW 600
SC DYW
Sbjct: 673 SCGDYW 678
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 128/266 (48%), Gaps = 26/266 (9%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRL--- 59
+ N+ A+V Y + G + EA + QMP ++VVSW M+ G+ + + DDA +
Sbjct: 169 DTNLFIGNALVAMYGKCGCLREARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEICKE 228
Query: 60 ---FDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRID 116
++ + +A + V+ Y V +F+ M KKN+ISW MI+ YVNN+ +
Sbjct: 229 MDSLNLNHDAGTMASLSPVVCYTSLENVQYIHNMFERMTKKNLISWNVMIAIYVNNSMPN 288
Query: 117 VARKLFEVMPE----KNEVSWTAMLMGYTQCGRIQDAWELF----------KAMPMKSVV 162
A LF M E + V+ ++L CG D LF K +++
Sbjct: 289 EAVSLFLQMEECGMKPDAVTIASLL---PACG---DLSALFLGRRLHKYIEKGNLQPNLL 342
Query: 163 ASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEG 222
N+++ + G +++AR VFD+MR +D +W+ M+ Y R G + + LF M G
Sbjct: 343 LENALLDMYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSG 402
Query: 223 VRVNFPSLISVLSVCASLASLDHGRQ 248
+ + +SVLS C+ LD GR
Sbjct: 403 QNPDSIAFVSVLSACSHTGLLDQGRH 428
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 102/219 (46%), Gaps = 6/219 (2%)
Query: 248 QVHAQLV-RCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQY 306
++H+++V +D +A L+ Y GE + IFD K++V +N +I Y
Sbjct: 56 KLHSKIVINEHLRIDPTLAIKLMRAYSAQGETSVARYIFDRSLEKNVVFFNVMIRSYVNN 115
Query: 307 GLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEH 366
L ++L +F M S PD T VL ACS ++ G ++ +++ K ++
Sbjct: 116 NLYVEALSIFQVMLSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAI-VKVGLDTNLFI 174
Query: 367 YACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLE 426
+V + G+ G + +A K+++ MP+ D + W S++ + D A K++ L
Sbjct: 175 GNALVAMYGKCGCLREARKVLDQMPYR-DVVSWNSMVAGYAQSGQFDDALEICKEMDSLN 233
Query: 427 -PKNAGPYILLSNI--YASQGRFHDVAELRKNMRKRNVI 462
+AG LS + Y S + + + M K+N+I
Sbjct: 234 LNHDAGTMASLSPVVCYTSLENVQYIHNMFERMTKKNLI 272
>gi|357131877|ref|XP_003567560.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 808
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 229/642 (35%), Positives = 353/642 (54%), Gaps = 52/642 (8%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVV 69
TA+V Y + A T+F +MP ++VV+W ML G+ + D +M +
Sbjct: 168 TALVDVYAKCASFRHAATVFRRMPARDVVAWNAMLAGYALHGKYSDTIACLLLMQDDHAP 227
Query: 70 AQTNMVLGY---CQDGRVDEGREIFD--------EMPKKNVISWTTMISGYVNNNRIDVA 118
+ +V Q G + +GR + K V+ T ++ Y + A
Sbjct: 228 NASTLVALLPLLAQHGALSQGRAVHAYSVRACSLHDHKDGVLVGTALLDMYAKCGHLVYA 287
Query: 119 RKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSV----------------- 161
++FE M +NEV+W+A++ G+ CGR+ +A+ LFK M + +
Sbjct: 288 SRVFEAMAVRNEVTWSALVGGFVLCGRMLEAFSLFKDMLAQGLCFLSPTSVASALRACAN 347
Query: 162 -----------------------VASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGM 198
A NS++ + G + +A +FDQM KD ++S +
Sbjct: 348 LSDLCLGKQLHALLAKSGLHTDLTAGNSLLSMYAKAGLIDQATTLFDQMVVKDTVSYSAL 407
Query: 199 IKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQF 258
+ Y + G E +F MQ V+ + +++S++ C+ LA+L HG+ H ++
Sbjct: 408 VSGYVQNGKADEAFRVFRKMQACNVQPDVATMVSLIPACSHLAALQHGKCGHGSVIVRGI 467
Query: 259 DVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHE 318
+ + + LI MY KCG + + IFD ++DIV WN++I+GY +GLG+++ +F +
Sbjct: 468 ASETSICNALIDMYAKCGRIDLSRQIFDVMPARDIVSWNTMIAGYGIHGLGKEATALFLD 527
Query: 319 MFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAG 378
M PDDVT + ++SACS++G V EG+ F M KY + P+ EHY MVDLL R G
Sbjct: 528 MKHQACEPDDVTFICLISACSHSGLVTEGKRWFHMMAHKYGITPRMEHYIGMVDLLARGG 587
Query: 379 QVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSN 438
+++A + I+ MP + D +WG+LLGACR H +DL + + + QL P+ G ++LLSN
Sbjct: 588 FLDEAYQFIQGMPLKADVRVWGALLGACRVHKNIDLGKQVSSMIQQLGPEGTGNFVLLSN 647
Query: 439 IYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLE 498
I+++ GRF + AE+R +++ K PGCSWIE+ +H F G D SH + I + L+
Sbjct: 648 IFSAAGRFDEAAEVRIIQKEQGFKKSPGCSWIEINGSLHAFIGGD-RSHAQSSEIYQELD 706
Query: 499 KIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLR 558
I + + GY D+SFVL DV+EEEK +L YHSEKLA+A+G++ L E I V KNLR
Sbjct: 707 NILVDINKLGYRADTSFVLQDVEEEEKEKALLYHSEKLAIAFGVLTLSEDKTIFVTKNLR 766
Query: 559 VCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
VCGDCH+ IK ++ V R II+RDANRFHHFK+G CSC D+W
Sbjct: 767 VCGDCHTVIKYMTLVRKRAIIVRDANRFHHFKNGQCSCGDFW 808
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 87/358 (24%), Positives = 172/358 (48%), Gaps = 16/358 (4%)
Query: 65 EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEV 124
D+ T +V Y + +F MP ++V++W M++GY + + +
Sbjct: 161 HADLFVSTALVDVYAKCASFRHAATVFRRMPARDVVAWNAMLAGYALHGKYSDTIACLLL 220
Query: 125 MPE---KNEVSWTAML-----MGYTQCGRIQDAWELFKAMPMK----SVVASNSMILGLG 172
M + N + A+L G GR A+ + +A + V+ +++
Sbjct: 221 MQDDHAPNASTLVALLPLLAQHGALSQGRAVHAYSV-RACSLHDHKDGVLVGTALLDMYA 279
Query: 173 QNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFP-SLI 231
+ G + A VF+ M +++ TWS ++ + G LE LF M +G+ P S+
Sbjct: 280 KCGHLVYASRVFEAMAVRNEVTWSALVGGFVLCGRMLEAFSLFKDMLAQGLCFLSPTSVA 339
Query: 232 SVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASK 291
S L CA+L+ L G+Q+HA L + D+ + L++MY K G + + +FD K
Sbjct: 340 SALRACANLSDLCLGKQLHALLAKSGLHTDLTAGNSLLSMYAKAGLIDQATTLFDQMVVK 399
Query: 292 DIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIF 351
D V +++++SGY Q G +++ +VF +M + V PD T+V ++ ACS+ ++ G+
Sbjct: 400 DTVSYSALVSGYVQNGKADEAFRVFRKMQACNVQPDVATMVSLIPACSHLAALQHGKCGH 459
Query: 352 ESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTH 409
S+ + + +T ++D+ + G+++ + ++ + MP D + W +++ H
Sbjct: 460 GSVIVRGIAS-ETSICNALIDMYAKCGRIDLSRQIFDVMPAR-DIVSWNTMIAGYGIH 515
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 112/233 (48%), Gaps = 5/233 (2%)
Query: 175 GEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVL 234
G++ AR +FDQ+ ++ +I+ Y +G L + +L ++ + N + VL
Sbjct: 77 GDLSLARHLFDQIPAPGIHDYNALIRAYSLRGPALALRLYRSLRRRRLPQPNNYTFPFVL 136
Query: 235 SVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIV 294
C++L L R VH R D++V++ L+ +Y KC +F ++D+V
Sbjct: 137 KACSALLDLRSARAVHCHAARAGLHADLFVSTALVDVYAKCASFRHAATVFRRMPARDVV 196
Query: 295 MWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFE-S 353
WN++++GYA +G ++ + P+ TLV +L + G + +GR + S
Sbjct: 197 AWNAMLAGYALHGKYSDTIACL-LLMQDDHAPNASTLVALLPLLAQHGALSQGRAVHAYS 255
Query: 354 MKSKYLVEPKTEHY--ACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLG 404
+++ L + K ++D+ + G + A ++ EAM + + W +L+G
Sbjct: 256 VRACSLHDHKDGVLVGTALLDMYAKCGHLVYASRVFEAMAVR-NEVTWSALVG 307
>gi|326497745|dbj|BAK05962.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 742
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 229/609 (37%), Positives = 361/609 (59%), Gaps = 10/609 (1%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
+P + + ++ Y E G+ +A F + K+VV+WT ++ G + +DDARRL
Sbjct: 135 LPSAVPLIASPIIHMYAELGLPGDARRAFDEASVKDVVAWTTVISGLAKMGLLDDARRLL 194
Query: 61 DMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNV----ISWTTMISGYVNNNRID 116
P ++VV T ++ GY + GR E + F+ M + ++ M+S ++
Sbjct: 195 ARAPVRNVVTWTGLISGYSRAGRAAEAVDCFNSMLSDGIAPDEVTVIGMLSACGQLKDLN 254
Query: 117 VARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAMPM-KSVVASNSMILGL 171
L ++ +K ++ A++ Y +CG A E+F A+ + N+MI G
Sbjct: 255 FGCSLHMLVGDKRMLMSDKLVVALIDMYAKCGDTGRAREVFDALGRGRGPQPWNAMIDGY 314
Query: 172 GQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLI 231
+ G V AR +FDQM + D T++ +I Y G E + LFT M++ G+ + +++
Sbjct: 315 CKVGHVDIARSLFDQMEDHDVITFNSLITGYIHGGRLREALLLFTKMRRHGLGADNFTMV 374
Query: 232 SVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASK 291
+L+ ASL +L GR +HA + + + DVY+ + L+ MY+KCG + + + F + +
Sbjct: 375 GLLTASASLGALPQGRALHACIEQRLVERDVYLGTALLDMYMKCGRVEEAMVAFKQMSVR 434
Query: 292 DIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIF 351
D+ W+++I G A G+G+ +L+ F M G + VT + VL+ACS++ + EGR F
Sbjct: 435 DVHTWSAMIGGLAFNGMGKAALEHFFWMKCDGFHANSVTYIAVLTACSHSCLLDEGRLYF 494
Query: 352 ESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMK 411
+ M+ + + P+ EHY CM+DLLGR+G +++AM L++ MP +P+A+IW S+L ACR H
Sbjct: 495 DEMRLLHNIRPQIEHYGCMIDLLGRSGLLDEAMDLVQTMPMQPNAVIWASILSACRVHKN 554
Query: 412 LDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIE 471
+DLA+ AA LL+LEP Y+ + NIY ++ D +++R+ M KR V K G S I
Sbjct: 555 VDLAQNAAHHLLKLEPAEDAVYVQMYNIYIDSRQWEDASKIRRLMEKRGVKKTAGYSSIA 614
Query: 472 VEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRY 531
V +VH F D SHP+ I+ M+E+IG L+ AGY P +S + DVDEEEK +L
Sbjct: 615 VAGQVHKFIVGD-RSHPQIAEIVVMMEEIGRRLKSAGYSPITSQITVDVDEEEKEQALLA 673
Query: 532 HSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKD 591
HSEKLA+A+GLV L +P+ ++KNLRVC DCHSAIKLIS++ REII+RD +RFHHF+
Sbjct: 674 HSEKLAIAFGLVSLAPNLPVHIIKNLRVCEDCHSAIKLISRLWNREIIVRDRSRFHHFRG 733
Query: 592 GLCSCRDYW 600
G+CSC D+W
Sbjct: 734 GVCSCNDFW 742
>gi|15237421|ref|NP_197188.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174141|sp|Q9LFL5.1|PP390_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g16860
gi|9755687|emb|CAC01699.1| putative protein [Arabidopsis thaliana]
gi|332004967|gb|AED92350.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 850
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 231/590 (39%), Positives = 348/590 (58%), Gaps = 25/590 (4%)
Query: 35 KNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEM 94
+N+ ++ + + +D+A +F M KDVV+ MV GY Q GR ++ +F++M
Sbjct: 262 QNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKM 321
Query: 95 P----KKNVISWTTMISGYVNNN----RIDVARKLFEVMPEKNEVSWTAMLMGYT----- 141
K +V++W+ ISGY + V R++ + NEV+ ++L G
Sbjct: 322 QEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGAL 381
Query: 142 ------QCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQM--REKDDA 193
C I+ +L K + N +I + +V AR +FD + +E+D
Sbjct: 382 MHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVV 441
Query: 194 TWSGMIKVYERKGYELEVIDLFTLMQKEG--VRVNFPSLISVLSVCASLASLDHGRQVHA 251
TW+ MI Y + G + ++L + M +E R N ++ L CASLA+L G+Q+HA
Sbjct: 442 TWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHA 501
Query: 252 QLVRCQFD-VDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGE 310
+R Q + V ++V++ LI MY KCG + +L+FDN +K+ V W S+++GY +G GE
Sbjct: 502 YALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGE 561
Query: 311 KSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACM 370
++L +F EM G D VTL+ VL ACS++G + +G E F MK+ + V P EHYAC+
Sbjct: 562 EALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACL 621
Query: 371 VDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNA 430
VDLLGRAG++ A++LIE MP EP ++W + L CR H K++L E AA+K+ +L +
Sbjct: 622 VDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHD 681
Query: 431 GPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEH 490
G Y LLSN+YA+ GR+ DV +R MR + V K PGCSW+E K F D +HP
Sbjct: 682 GSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGD-KTHPHA 740
Query: 491 PMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVP 550
I ++L +++ GY P++ F LHDVD+EEK L HSEKLA+AYG++ P+G
Sbjct: 741 KEIYQVLLDHMQRIKDIGYVPETGFALHDVDDEEKDDLLFEHSEKLALAYGILTTPQGAA 800
Query: 551 IRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
IR+ KNLRVCGDCH+A +S+++ +IILRD++RFHHFK+G CSC+ YW
Sbjct: 801 IRITKNLRVCGDCHTAFTYMSRIIDHDIILRDSSRFHHFKNGSCSCKGYW 850
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 107/400 (26%), Positives = 198/400 (49%), Gaps = 27/400 (6%)
Query: 35 KNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEM 94
NV ++ + R + DAR++FD M DVV+ +++ Y + G+ E+F M
Sbjct: 160 SNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRM 219
Query: 95 P-----KKNVISWTTMISGYVNNNRIDVARKL--FEVMPE--KNEVSWTAMLMGYTQCGR 145
+ + I+ ++ + + ++L F V E +N ++ Y +CG
Sbjct: 220 TNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGM 279
Query: 146 IQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREK----DDATWSGMIKV 201
+ +A +F M +K VV+ N+M+ G Q G + A +F++M+E+ D TWS I
Sbjct: 280 MDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISG 339
Query: 202 YERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDV- 260
Y ++G E + + M G++ N +LISVLS CAS+ +L HG+++H ++ D+
Sbjct: 340 YAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLR 399
Query: 261 ------DVYVASVLITMYIKCGELVKGKLIFDNFASK--DIVMWNSIISGYAQYGLGEKS 312
+ V + LI MY KC ++ + +FD+ + K D+V W +I GY+Q+G K+
Sbjct: 400 KNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKA 459
Query: 313 LKVFHEMFSSGVM--PDDVTLVGVLSACSYTGKVKEGREIFE-SMKSKYLVEPKTEHYAC 369
L++ EMF P+ T+ L AC+ ++ G++I +++++ P C
Sbjct: 460 LELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVS-NC 518
Query: 370 MVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTH 409
++D+ + G + DA + + M + + W SL+ H
Sbjct: 519 LIDMYAKCGSISDARLVFDNM-MAKNEVTWTSLMTGYGMH 557
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 99/396 (25%), Positives = 179/396 (45%), Gaps = 63/396 (15%)
Query: 72 TNMVLGYCQDGRVDEGREIFDEMPKKN--VISWTTMISGYVNNNRIDVARKLFEVMPEKN 129
++++ Y G + + P + V W ++I Y +N + LF +M +
Sbjct: 63 SHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLM---H 119
Query: 130 EVSWTAMLMGY------------TQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEV 177
+SWT + +CG A L + +V N+++ + +
Sbjct: 120 SLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGF-ISNVFVGNALVAMYSRCRSL 178
Query: 178 QKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKE-GVRVNFPSLISVLSV 236
AR VFD+M D +W+ +I+ Y + G +++F+ M E G R + +L++VL
Sbjct: 179 SDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPP 238
Query: 237 CASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMW 296
CASL + G+Q+H V + +++V + L+ MY KCG + + +F N + KD+V W
Sbjct: 239 CASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSW 298
Query: 297 NSI-----------------------------------ISGYAQYGLGEKSLKVFHEMFS 321
N++ ISGYAQ GLG ++L V +M S
Sbjct: 299 NAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLS 358
Query: 322 SGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYA-------CMVDLL 374
SG+ P++VTL+ VLS C+ G + G+EI KY ++ + + ++D+
Sbjct: 359 SGIKPNEVTLISVLSGCASVGALMHGKEI-HCYAIKYPIDLRKNGHGDENMVINQLIDMY 417
Query: 375 GRAGQVEDAMKLIEAM-PFEPDAIIWGSLLGACRTH 409
+ +V+ A + +++ P E D + W ++G H
Sbjct: 418 AKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQH 453
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 108/481 (22%), Positives = 183/481 (38%), Gaps = 129/481 (26%)
Query: 4 RNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMM 63
+N+ +V Y + GM+ EA T+F M K+VVSW M+ G+ + R +DA RLF+ M
Sbjct: 262 QNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKM 321
Query: 64 PEK----DVVAQTNMVLGYCQDGRVDEG----REIFDEMPKKNVISWTTMISG------- 108
E+ DVV + + GY Q G E R++ K N ++ +++SG
Sbjct: 322 QEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGAL 381
Query: 109 -----------------------------------YVNNNRIDVARKLFEVMP--EKNEV 131
Y ++D AR +F+ + E++ V
Sbjct: 382 MHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVV 441
Query: 132 SWTAMLMGYTQCGRIQDAWELFKAM--------PMKSVVA-------------------- 163
+WT M+ GY+Q G A EL M P ++
Sbjct: 442 TWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHA 501
Query: 164 --------------SNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYEL 209
SN +I + G + AR+VFD M K++ TW+ ++ Y GY
Sbjct: 502 YALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGE 561
Query: 210 EVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLI 269
E + +F M++ G +++ +L+ VL C+ +D G + ++
Sbjct: 562 EALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRM---------------- 605
Query: 270 TMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDV 329
K +F S + ++ + G +L++ EM + P V
Sbjct: 606 ------------KTVFG--VSPGPEHYACLVDLLGRAGRLNAALRLIEEM---PMEPPPV 648
Query: 330 TLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEA 389
V LS C GKV+ G + + K L Y + +L AG+ +D ++
Sbjct: 649 VWVAFLSCCRIHGKVELGE--YAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSL 706
Query: 390 M 390
M
Sbjct: 707 M 707
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/281 (22%), Positives = 111/281 (39%), Gaps = 63/281 (22%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPE---------------------------- 34
ER+VV+WT M+ GY + G +A L +M E
Sbjct: 437 ERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIG 496
Query: 35 -----------KNVVSWTV---MLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQ 80
+N V V ++ + + I DAR +FD M K+ V T+++ GY
Sbjct: 497 KQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGM 556
Query: 81 DGRVDEGREIFDEMPKKN---------VISWTTMISGYVNNN--RIDVARKLFEVMPEKN 129
G +E IFDEM + V+ + SG ++ + + +F V P
Sbjct: 557 HGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPE 616
Query: 130 EVSWTAMLMGYTQCGRIQDAWELFKAMPMKS------VVASNSMILGLGQNGEVQKARVV 183
+ L+G + GR+ A L + MPM+ S I G + GE ++
Sbjct: 617 HYACLVDLLG--RAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKIT 674
Query: 184 FDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVR 224
++ D +++ + +Y G +V + +LM+ +GV+
Sbjct: 675 --ELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVK 713
>gi|115471325|ref|NP_001059261.1| Os07g0239600 [Oryza sativa Japonica Group]
gi|33146689|dbj|BAC80084.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50510012|dbj|BAD30625.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610797|dbj|BAF21175.1| Os07g0239600 [Oryza sativa Japonica Group]
Length = 720
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 224/578 (38%), Positives = 342/578 (59%), Gaps = 16/578 (2%)
Query: 36 NVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYC-QDGRVDEGREIFDEM 94
+VV +L + + + + ARR+F M E+D V+ N+ +G C Q G + ++FDE
Sbjct: 146 DVVLCNAVLDMYAKCGQFERARRVFGAMAERDAVSW-NIAIGACIQSGDILGSMQLFDES 204
Query: 95 PKKNVISWTTMISGYVNNNRIDVARKLFEVMPEK----NEVSWT-----AMLMGYTQCGR 145
P ++ SW T+ISG + + A M + N +++ A ++ GR
Sbjct: 205 PLRDTTSWNTIISGLMRSGHAADALSHLRRMAQAGVVFNHYTYSTAFVLAGMLLLPDLGR 264
Query: 146 IQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQ---MREKDDATWSGMIKVY 202
L A+ + V S+ M + + G ++ A VFD + + WS M+ Y
Sbjct: 265 QLHGRVLIAALEGDAFVRSSLMDM-YCKCGLLEAAASVFDHWSPLTRDMNFAWSTMVAGY 323
Query: 203 ERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDV 262
+ G E E +DLF M +EGV + +L SV + CA++ ++ GRQVH + + + +D
Sbjct: 324 VQNGREEEALDLFRRMLREGVAADRFTLTSVAAACANVGMVEQGRQVHGCVEKLWYKLDA 383
Query: 263 YVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSS 322
+AS ++ MY KCG L + IFD +K+I +W S++ YA +G G ++++F M +
Sbjct: 384 PLASAIVDMYAKCGNLEDARSIFDRACTKNIAVWTSMLCSYASHGQGRIAIELFERMTAE 443
Query: 323 GVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVED 382
+ P+++TLVGVLSACS+ G V EG F+ M+ +Y + P EHY C+VDL GR+G ++
Sbjct: 444 KMTPNEITLVGVLSACSHVGLVSEGELYFKQMQEEYGIVPSIEHYNCIVDLYGRSGLLDK 503
Query: 383 AMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYAS 442
A IE +AI+W +LL ACR H + A++A++KL+QLE +AG Y++LSNIYA+
Sbjct: 504 AKNFIEENNINHEAIVWKTLLSACRLHQHNEYAKLASEKLVQLEQCDAGSYVMLSNIYAT 563
Query: 443 QGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGG 502
++HD ELR +M++R V K PG SWI ++ VH F D SHP+ I LEK+
Sbjct: 564 NNKWHDTFELRVSMQERKVRKQPGRSWIHLKNTVHTFVAGD-ASHPQSAEIYAYLEKLVE 622
Query: 503 LLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGD 562
L+E GY + V+HDV++E++ +L++HSEKLA+A+G++ P G P+R+ KNLRVC D
Sbjct: 623 RLKEIGYTSRTDLVVHDVEDEQRETALKFHSEKLAIAFGIISTPSGTPLRIFKNLRVCED 682
Query: 563 CHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
CH AIK IS GREI++RD RFHHFKD CSC D+W
Sbjct: 683 CHEAIKYISLATGREIVVRDLYRFHHFKDASCSCEDFW 720
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 95/375 (25%), Positives = 177/375 (47%), Gaps = 14/375 (3%)
Query: 47 FIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEM-----PKKNVIS 101
++R R DAR +FD P + T + G + GR +G F EM N
Sbjct: 55 WVRRRRFHDARGVFDERPTRTAPVWTLTISGCARRGRYADGMRAFAEMLAEGEATPNAFV 114
Query: 102 WTTMISGYVNNNRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAMP 157
++ ++ +++ M + V A+L Y +CG+ + A +F AM
Sbjct: 115 LAAVVRCCAGMGDVESGKRVHGWMLRNGVHLDVVLCNAVLDMYAKCGQFERARRVFGAMA 174
Query: 158 MKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTL 217
+ V+ N I Q+G++ + +FD+ +D +W+ +I R G+ + +
Sbjct: 175 ERDAVSWNIAIGACIQSGDILGSMQLFDESPLRDTTSWNTIISGLMRSGHAADALSHLRR 234
Query: 218 MQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGE 277
M + GV N + + + L D GRQ+H +++ + D +V S L+ MY KCG
Sbjct: 235 MAQAGVVFNHYTYSTAFVLAGMLLLPDLGRQLHGRVLIAALEGDAFVRSSLMDMYCKCGL 294
Query: 278 LVKGKLIFDNFA--SKDI-VMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGV 334
L +FD+++ ++D+ W+++++GY Q G E++L +F M GV D TL V
Sbjct: 295 LEAAASVFDHWSPLTRDMNFAWSTMVAGYVQNGREEEALDLFRRMLREGVAADRFTLTSV 354
Query: 335 LSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEP 394
+AC+ G V++GR++ ++ K + + +VD+ + G +EDA + +
Sbjct: 355 AAACANVGMVEQGRQVHGCVE-KLWYKLDAPLASAIVDMYAKCGNLEDARSIFD-RACTK 412
Query: 395 DAIIWGSLLGACRTH 409
+ +W S+L + +H
Sbjct: 413 NIAVWTSMLCSYASH 427
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/361 (22%), Positives = 151/361 (41%), Gaps = 66/361 (18%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDA---- 56
M ER+ VSW + ++ G I + LF + P ++ SW ++ G +R DA
Sbjct: 173 MAERDAVSWNIAIGACIQSGDILGSMQLFDESPLRDTTSWNTIISGLMRSGHAADALSHL 232
Query: 57 RRLFD--------------------MMP---------------EKDVVAQTNMVLGYCQD 81
RR+ ++P E D +++++ YC+
Sbjct: 233 RRMAQAGVVFNHYTYSTAFVLAGMLLLPDLGRQLHGRVLIAALEGDAFVRSSLMDMYCKC 292
Query: 82 GRVDEGREIFDE---MPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEK---------N 129
G ++ +FD + + +W+TM++GYV N R + A LF M +
Sbjct: 293 GLLEAAASVFDHWSPLTRDMNFAWSTMVAGYVQNGREEEALDLFRRMLREGVAADRFTLT 352
Query: 130 EVSWTAMLMGYTQCGR-----IQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVF 184
V+ +G + GR ++ W A P+ S + + G ++ AR +F
Sbjct: 353 SVAAACANVGMVEQGRQVHGCVEKLWYKLDA-PLASAIVDM-----YAKCGNLEDARSIF 406
Query: 185 DQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLD 244
D+ K+ A W+ M+ Y G I+LF M E + N +L+ VLS C+ + +
Sbjct: 407 DRACTKNIAVWTSMLCSYASHGQGRIAIELFERMTAEKMTPNEITLVGVLSACSHVGLVS 466
Query: 245 HGRQVHAQLVRCQFDV--DVYVASVLITMYIKCGELVKGK-LIFDNFASKDIVMWNSIIS 301
G Q+ ++ + + + ++ +Y + G L K K I +N + + ++W +++S
Sbjct: 467 EGELYFKQMQE-EYGIVPSIEHYNCIVDLYGRSGLLDKAKNFIEENNINHEAIVWKTLLS 525
Query: 302 G 302
Sbjct: 526 A 526
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 117/292 (40%), Gaps = 17/292 (5%)
Query: 178 QKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEG-VRVNFPSLISVLSV 236
AR VFD+ + W+ I R+G + + F M EG N L +V+
Sbjct: 62 HDARGVFDERPTRTAPVWTLTISGCARRGRYADGMRAFAEMLAEGEATPNAFVLAAVVRC 121
Query: 237 CASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMW 296
CA + ++ G++VH ++R +DV + + ++ MY KCG+ + + +F A +D V W
Sbjct: 122 CAGMGDVESGKRVHGWMLRNGVHLDVVLCNAVLDMYAKCGQFERARRVFGAMAERDAVSW 181
Query: 297 NSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKS 356
N I Q G S+++F E + D + ++S +G + M
Sbjct: 182 NIAIGACIQSGDILGSMQLFDE----SPLRDTTSWNTIISGLMRSGHAADALSHLRRMAQ 237
Query: 357 KYLVEPKTEHYACMV----DLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKL 412
+V + V LL G+ LI A+ E DA + SL+ + K
Sbjct: 238 AGVVFNHYTYSTAFVLAGMLLLPDLGRQLHGRVLIAAL--EGDAFVRSSLMD---MYCKC 292
Query: 413 DLAEVAAKKLLQLEPKNAGPYILLSNI---YASQGRFHDVAELRKNMRKRNV 461
L E AA P S + Y GR + +L + M + V
Sbjct: 293 GLLEAAASVFDHWSPLTRDMNFAWSTMVAGYVQNGREEEALDLFRRMLREGV 344
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 73/169 (43%), Gaps = 3/169 (1%)
Query: 239 SLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNS 298
S A L GR + + + + ++ +++ + +FD ++ +W
Sbjct: 22 SAALLLRGRAARGGSLEARLATVPHERASVLRFWVRRRRFHDARGVFDERPTRTAPVWTL 81
Query: 299 IISGYAQYGLGEKSLKVFHEMFSSG-VMPDDVTLVGVLSACSYTGKVKEGREIFESMKSK 357
ISG A+ G ++ F EM + G P+ L V+ C+ G V+ G+ + M +
Sbjct: 82 TISGCARRGRYADGMRAFAEMLAEGEATPNAFVLAAVVRCCAGMGDVESGKRVHGWML-R 140
Query: 358 YLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGAC 406
V ++D+ + GQ E A ++ AM E DA+ W +GAC
Sbjct: 141 NGVHLDVVLCNAVLDMYAKCGQFERARRVFGAMA-ERDAVSWNIAIGAC 188
>gi|115471645|ref|NP_001059421.1| Os07g0299800 [Oryza sativa Japonica Group]
gi|34394298|dbj|BAC84780.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610957|dbj|BAF21335.1| Os07g0299800 [Oryza sativa Japonica Group]
Length = 673
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 223/549 (40%), Positives = 337/549 (61%), Gaps = 18/549 (3%)
Query: 67 DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMP 126
D + + ++ Y R + R FDE+P N + T M SGYV NN + + +LF M
Sbjct: 128 DPYSASALLHMYHHCSRPMDARRAFDEIPDPNPVIVTAMASGYVRNNLVYHSLELFRAMI 187
Query: 127 EKNEVSW---TAMLMGYTQCGRIQDAWELFKAMPM-------KSVVASNSMILGLGQNG- 175
+ S A L+ ++ R+ D + ++ N+M+ + G
Sbjct: 188 ASDSASVVDEAAALVAFSASARVPDRGVTASLHALIAKIGFERNAGVVNTMLDSYAKGGS 247
Query: 176 -EVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQK--EGVRVNFPSLIS 232
+++ AR VFD M E+D +W+ MI +Y + G E I L++ M G++ N +L +
Sbjct: 248 RDLEVARKVFDTM-ERDVVSWNSMIALYAQNGMSAEAIGLYSKMLNVGGGIKCNAVALSA 306
Query: 233 VLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKD 292
VL CA ++ G+++H Q+VR + +VYV + ++ MY KCG + F K+
Sbjct: 307 VLLACAHAGAIQTGKRIHNQVVRMGLEENVYVGTSIVDMYSKCGRVEMASRAFRKIKEKN 366
Query: 293 IVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFE 352
I+ W+++I+GY +G G+++L++F EM SG+ P+ +T + VL+ACS+ G + EGR +
Sbjct: 367 ILSWSAMITGYGMHGRGQEALEIFTEMKRSGLRPNYITFISVLAACSHAGLLDEGRYWYN 426
Query: 353 SMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKL 412
+MK ++ +E EHY CMVDLLGRAG +++A LI+ M +PDA IWG+LL ACR H +
Sbjct: 427 AMKQEFGIEAGVEHYGCMVDLLGRAGCLDEAYSLIKEMKVKPDAAIWGALLSACRIHKNV 486
Query: 413 DLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEV 472
+LAE++ K+L +L+ N+G Y+LLSNIYA + DV +R ++ R + KPPG S E+
Sbjct: 487 ELAEMSVKRLFELDASNSGYYVLLSNIYAEARMWKDVERIRLLVKTRRIEKPPGYSSFEL 546
Query: 473 EKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYH 532
+ K+++F D SHP+H I LEK+ ++EAGY P++ VLHD+DEEEK +LR H
Sbjct: 547 KGKIYLFYVGD-KSHPQHIEIYSYLEKLLERMQEAGYVPNTGSVLHDLDEEEKESALRIH 605
Query: 533 SEKLAVAYGLVK-LPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKD 591
SEKLAVA+ L+ +P V I ++KNLRVC DCH+A+K I+K+ REII+RD RFHHFKD
Sbjct: 606 SEKLAVAFALMNSVPRSV-IHIIKNLRVCSDCHTAMKFITKITEREIIIRDLQRFHHFKD 664
Query: 592 GLCSCRDYW 600
GLCSCRDYW
Sbjct: 665 GLCSCRDYW 673
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 90/350 (25%), Positives = 161/350 (46%), Gaps = 30/350 (8%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM---PEKNVVSWTVMLGGFIRDSRIDD-- 55
+P+ N V TAM GYV ++ + LF M +VV L F +R+ D
Sbjct: 155 IPDPNPVIVTAMASGYVRNNLVYHSLELFRAMIASDSASVVDEAAALVAFSASARVPDRG 214
Query: 56 -ARRLFDMMP----EKDVVAQTNMVLGYCQDGRVD--EGREIFDEMPKKNVISWTTMISG 108
L ++ E++ M+ Y + G D R++FD M +++V+SW +MI+
Sbjct: 215 VTASLHALIAKIGFERNAGVVNTMLDSYAKGGSRDLEVARKVFDTM-ERDVVSWNSMIAL 273
Query: 109 YVNNNRIDVARKLFEVM------PEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPM---- 158
Y N A L+ M + N V+ +A+L+ G IQ + +
Sbjct: 274 YAQNGMSAEAIGLYSKMLNVGGGIKCNAVALSAVLLACAHAGAIQTGKRIHNQVVRMGLE 333
Query: 159 KSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLM 218
++V S++ + G V+ A F +++EK+ +WS MI Y G E +++FT M
Sbjct: 334 ENVYVGTSIVDMYSKCGRVEMASRAFRKIKEKNILSWSAMITGYGMHGRGQEALEIFTEM 393
Query: 219 QKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVA--SVLITMYIKCG 276
++ G+R N+ + ISVL+ C+ LD GR + ++ +F ++ V ++ + + G
Sbjct: 394 KRSGLRPNYITFISVLAACSHAGLLDEGRYWY-NAMKQEFGIEAGVEHYGCMVDLLGRAG 452
Query: 277 ELVKG-KLIFDNFASKDIVMWNSIISG---YAQYGLGEKSLKVFHEMFSS 322
L + LI + D +W +++S + L E S+K E+ +S
Sbjct: 453 CLDEAYSLIKEMKVKPDAAIWGALLSACRIHKNVELAEMSVKRLFELDAS 502
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 117/251 (46%), Gaps = 21/251 (8%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQM------PEKNVVSWTVMLGGFIRDSRIDDA 56
ER+VVSW +M+ Y + GM EA L+ +M + N V+ + +L I
Sbjct: 261 ERDVVSWNSMIALYAQNGMSAEAIGLYSKMLNVGGGIKCNAVALSAVLLACAHAGAIQTG 320
Query: 57 RRLFD----MMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+R+ + M E++V T++V Y + GRV+ F ++ +KN++SW+ MI+GY +
Sbjct: 321 KRIHNQVVRMGLEENVYVGTSIVDMYSKCGRVEMASRAFRKIKEKNILSWSAMITGYGMH 380
Query: 113 NRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAMPMK-----SVVA 163
R A ++F M N +++ ++L + G + + + AM + V
Sbjct: 381 GRGQEALEIFTEMKRSGLRPNYITFISVLAACSHAGLLDEGRYWYNAMKQEFGIEAGVEH 440
Query: 164 SNSMILGLGQNGEVQKARVVFDQMREKDDAT-WSGMIKVYE-RKGYELEVIDLFTLMQKE 221
M+ LG+ G + +A + +M+ K DA W ++ K EL + + L + +
Sbjct: 441 YGCMVDLLGRAGCLDEAYSLIKEMKVKPDAAIWGALLSACRIHKNVELAEMSVKRLFELD 500
Query: 222 GVRVNFPSLIS 232
+ L+S
Sbjct: 501 ASNSGYYVLLS 511
Score = 46.6 bits (109), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 74/166 (44%), Gaps = 16/166 (9%)
Query: 248 QVHAQLVRCQ-FDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQY 306
Q+H +R F D Y AS L+ MY C + + FD + V+ ++ SGY +
Sbjct: 114 QLHLLALRSGLFPSDPYSASALLHMYHHCSRPMDARRAFDEIPDPNPVIVTAMASGYVRN 173
Query: 307 GLGEKSLKVFHEMFSSGVMPDDVTLV---GVLSACSYTGKVKEGREIFESMK---SKYLV 360
L SL++F M +S D ++V L A S + +V + R + S+ +K
Sbjct: 174 NLVYHSLELFRAMIAS----DSASVVDEAAALVAFSASARVPD-RGVTASLHALIAKIGF 228
Query: 361 EPKTEHYACMVDLLGRAGQ--VEDAMKLIEAMPFEPDAIIWGSLLG 404
E M+D + G +E A K+ + M E D + W S++
Sbjct: 229 ERNAGVVNTMLDSYAKGGSRDLEVARKVFDTM--ERDVVSWNSMIA 272
>gi|356565531|ref|XP_003550993.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Glycine max]
Length = 628
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 230/591 (38%), Positives = 332/591 (56%), Gaps = 29/591 (4%)
Query: 14 RGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTN 73
R Y G + + TLF + P NV WT ++ A + M +
Sbjct: 63 RSYASLGHLHHSVTLFHRTPNPNVFLWTHIINAHAHFDLFHHALSYYSQMLTHPIQPNAF 122
Query: 74 MVLGYCQDGRVDEGREIFDEMPKKNVISW----TTMISGYVNNNRIDVARKLFEVMPEKN 129
+ + + R + K + S T ++ Y + A+KLF+ MPE++
Sbjct: 123 TLSSLLKACTLHPARAVHSHAIKFGLSSHLYVSTGLVDAYARGGDVASAQKLFDAMPERS 182
Query: 130 EVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMRE 189
VS+TAML Y + G + +A LF+ M MK VV N MI G Q+G +A V F +M
Sbjct: 183 LVSYTAMLTCYAKHGMLPEARVLFEGMGMKDVVCWNVMIDGYAQHGCPNEALVFFRKMMM 242
Query: 190 KDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQV 249
VR N ++++VLS C + +L+ G+ V
Sbjct: 243 MM------------------------GGNGNGKVRPNEITVVAVLSSCGQVGALECGKWV 278
Query: 250 HAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLG 309
H+ + V+V V + L+ MY KCG L + +FD KD+V WNS+I GY +G
Sbjct: 279 HSYVENNGIKVNVRVGTALVDMYCKCGSLEDARKVFDVMEGKDVVAWNSMIMGYGIHGFS 338
Query: 310 EKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYAC 369
+++L++FHEM GV P D+T V VL+AC++ G V +G E+F+SMK Y +EPK EHY C
Sbjct: 339 DEALQLFHEMCCIGVKPSDITFVAVLTACAHAGLVSKGWEVFDSMKDGYGMEPKVEHYGC 398
Query: 370 MVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKN 429
MV+LLGRAG++++A L+ +M EPD ++WG+LL ACR H + L E A+ L+ +
Sbjct: 399 MVNLLGRAGRMQEAYDLVRSMEVEPDPVLWGTLLWACRIHSNVSLGEEIAEILVSNGLAS 458
Query: 430 AGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPE 489
+G Y+LLSN+YA+ + VA++R M+ V K PGCS IEV+ +VH F D HP
Sbjct: 459 SGTYVLLSNMYAAARNWVGVAKVRSMMKGSGVEKEPGCSSIEVKNRVHEFVAGD-RRHPR 517
Query: 490 HPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGV 549
I MLEK+ G L+E Y P + VLHD+ E+EK SL HSEKLA+A+GL+ G
Sbjct: 518 SKDIYSMLEKMNGWLKERHYTPKTDAVLHDIGEQEKEQSLEVHSEKLALAFGLISTSPGA 577
Query: 550 PIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
I+++KNLRVC DCH+ +K++SK+ GR+II+RD NRFHHF++G CSCRDYW
Sbjct: 578 AIKIVKNLRVCLDCHAVMKIMSKISGRKIIMRDRNRFHHFENGSCSCRDYW 628
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 75/248 (30%), Positives = 115/248 (46%), Gaps = 30/248 (12%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MPER++VS+TAM+ Y + GM+ EA LF M K+VV W VM+ G+ + ++A F
Sbjct: 178 MPERSLVSYTAMLTCYAKHGMLPEARVLFEGMGMKDVVCWNVMIDGYAQHGCPNEALVFF 237
Query: 61 -------------DMMPEKDVVAQTNMVLGYC-QDGRVDEGREIFDEMP----KKNVISW 102
+ P + V VL C Q G ++ G+ + + K NV
Sbjct: 238 RKMMMMMGGNGNGKVRPNEITVVA---VLSSCGQVGALECGKWVHSYVENNGIKVNVRVG 294
Query: 103 TTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVV 162
T ++ Y ++ ARK+F+VM K+ V+W +M+MGY G +A +LF M V
Sbjct: 295 TALVDMYCKCGSLEDARKVFDVMEGKDVVAWNSMIMGYGIHGFSDEALQLFHEMCCIGVK 354
Query: 163 ASN----SMILGLGQNGEVQKARVVFDQMR-----EKDDATWSGMIKVYERKGYELEVID 213
S+ +++ G V K VFD M+ E + M+ + R G E D
Sbjct: 355 PSDITFVAVLTACAHAGLVSKGWEVFDSMKDGYGMEPKVEHYGCMVNLLGRAGRMQEAYD 414
Query: 214 LFTLMQKE 221
L M+ E
Sbjct: 415 LVRSMEVE 422
>gi|125529330|gb|EAY77444.1| hypothetical protein OsI_05438 [Oryza sativa Indica Group]
Length = 813
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 231/652 (35%), Positives = 359/652 (55%), Gaps = 63/652 (9%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRID--------------- 54
TA++ YV+ + +A +F MP +++V+W ML G+
Sbjct: 164 TALLDMYVKCACLPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHR 223
Query: 55 ---DARRLFDMMP---EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISG 108
+A L ++P ++ +AQ V Y + R ++ V+ T ++
Sbjct: 224 LRPNASTLVALLPLLAQQGALAQGTSVHAYRIRACLHSNRNSKSKL-TDGVLLGTALLDM 282
Query: 109 YVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSV------- 161
Y + AR++F+ MP +NEV+W+A++ G+ C R+ A+ LFKAM + +
Sbjct: 283 YAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTS 342
Query: 162 ---------------------------------VASNSMILGLGQNGEVQKARVVFDQMR 188
A NS++ + G + +A +FD+M
Sbjct: 343 IASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMA 402
Query: 189 EKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQ 248
KD ++S ++ Y + G E +F MQ V + +++S++ C+ LA+L HGR
Sbjct: 403 VKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRC 462
Query: 249 VHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGL 308
H ++ + + + LI MY KCG + + +F+ S+DIV WN++I+GY +GL
Sbjct: 463 SHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGL 522
Query: 309 GEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYA 368
G+++ +F EM + G PD VT + +LSACS++G V EG+ F M+ Y + P+ EHY
Sbjct: 523 GKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMRHGYGLTPRMEHYI 582
Query: 369 CMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPK 428
CMVDLL R G +++A + I++MP D +W +LLGACR + +DL + ++ + +L P+
Sbjct: 583 CMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPE 642
Query: 429 NAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHP 488
G ++LLSNIY++ GRF + AE+R + + K PGCSWIE+ +H F G D SHP
Sbjct: 643 GTGNFVLLSNIYSAAGRFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGD-QSHP 701
Query: 489 EHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEG 548
+ P I R L+ I +++ GY PD+SFVL D++EEEK +L HSEKLA+AYG++ L E
Sbjct: 702 QSPEIYRELDNILVGIKKLGYQPDTSFVLQDLEEEEKEKALICHSEKLAIAYGILSLSED 761
Query: 549 VPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
I V KNLRVCGDCH+ IK IS + R II+RDANRFHHFK+G CSC D+W
Sbjct: 762 KTIFVTKNLRVCGDCHTVIKHISLLKRRAIIVRDANRFHHFKNGQCSCGDFW 813
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 103/443 (23%), Positives = 198/443 (44%), Gaps = 39/443 (8%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAG--TLFWQM------PEKNVVSWTVMLGGFIRDSR 52
+P +V ++ ++R Y A L+ +M P + + + D
Sbjct: 83 IPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFPFALKACSALADHH 142
Query: 53 IDDA--RRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYV 110
A R + D+ T ++ Y + + + IF MP +++++W M++GY
Sbjct: 143 CGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARDLVAWNAMLAGYA 202
Query: 111 NN--------NRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVV 162
++ + + + ++ + P N + A+L Q G + + A +++ +
Sbjct: 203 HHGMYHHAVAHLLSMQMQMHRLRP--NASTLVALLPLLAQQGALAQGTSV-HAYRIRACL 259
Query: 163 ASN---------SMILG------LGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGY 207
SN ++LG + G + AR VFD M +++ TWS +I +
Sbjct: 260 HSNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSR 319
Query: 208 ELEVIDLFTLMQKEGVRVNFP-SLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVAS 266
+ LF M +G+ P S+ S L CASL L G Q+HA L + D+ +
Sbjct: 320 MTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGN 379
Query: 267 VLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMP 326
L++MY K G + + +FD A KD V +++++SGY Q G E++ VF +M + V P
Sbjct: 380 SLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEP 439
Query: 327 DDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKL 386
D T+V ++ ACS+ ++ GR S+ + L +T ++D+ + G+++ + ++
Sbjct: 440 DAATMVSLIPACSHLAALQHGRCSHGSVIIRGLAS-ETSICNALIDMYAKCGRIDLSRQV 498
Query: 387 IEAMPFEPDAIIWGSLLGACRTH 409
MP D + W +++ H
Sbjct: 499 FNMMP-SRDIVSWNTMIAGYGIH 520
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 114/244 (46%), Gaps = 14/244 (5%)
Query: 174 NGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEV--IDLFTLMQKEGVRVNFPSLI 231
+G + +A +FDQ+ D T++ +I+ Y + L+ M + V N +
Sbjct: 70 SGHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFP 129
Query: 232 SVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASK 291
L C++LA GR +H + D++V++ L+ MY+KC L IF ++
Sbjct: 130 FALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPAR 189
Query: 292 DIVMWNSIISGYAQYGLGEKSLK--VFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGRE 349
D+V WN++++GYA +G+ ++ + +M + P+ TLV +L + G + +G
Sbjct: 190 DLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTS 249
Query: 350 I---------FESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWG 400
+ + SK + ++D+ + G + A ++ +AMP + + W
Sbjct: 250 VHAYRIRACLHSNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPAR-NEVTWS 308
Query: 401 SLLG 404
+L+G
Sbjct: 309 ALIG 312
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 124/256 (48%), Gaps = 19/256 (7%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV--VSWTVMLGGFIRDSRIDDAR- 57
MP RN V+W+A++ G+V +T+A LF M + + +S T + + +D R
Sbjct: 299 MPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRM 358
Query: 58 --RLFDMMPEK----DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVN 111
+L ++ + D+ A +++ Y + G +D+ +FDEM K+ +S++ ++SGYV
Sbjct: 359 GEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQ 418
Query: 112 NNRIDVARKLFEVMP----EKNEVSWTAML-----MGYTQCGRIQDAWELFKAMPMKSVV 162
N R + A +F+ M E + + +++ + Q GR + + + ++ +
Sbjct: 419 NGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSI 478
Query: 163 ASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEG 222
N++I + G + +R VF+ M +D +W+ MI Y G E LF M G
Sbjct: 479 C-NALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLG 537
Query: 223 VRVNFPSLISVLSVCA 238
+ + I +LS C+
Sbjct: 538 FPPDGVTFICLLSACS 553
>gi|359483488|ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 933
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 231/640 (36%), Positives = 363/640 (56%), Gaps = 48/640 (7%)
Query: 8 SWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKD 67
S A+V Y + G + +A ++F ++ + ++VSW ++ G + + A L M
Sbjct: 295 SANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRSG 354
Query: 68 V---VAQTNMVLGYCQD-GRVDEGREIFDEMPKKNVIS----WTTMISGYVNNNRIDVAR 119
+ + + L C G + GR++ + K ++ S ++ Y + ++ AR
Sbjct: 355 ICPNIFTLSSALKACAGMGLKELGRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDAR 414
Query: 120 KLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAM----------PMKSVVAS----- 164
F ++PEK+ ++W A++ GY+Q +A LF M + +++ S
Sbjct: 415 MAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQ 474
Query: 165 ------------------------NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIK 200
NS+I G+ V+ A +F++ D +++ MI
Sbjct: 475 VVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMIT 534
Query: 201 VYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDV 260
Y + G E + LF MQ ++ + S+L+ CA+L++ + G+Q+H +++ F +
Sbjct: 535 AYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVL 594
Query: 261 DVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMF 320
D++ + L+ MY KCG + F + IV W+++I G AQ+G G ++L++F++M
Sbjct: 595 DIFAGNSLVNMYAKCGSIDDAGRAFSELTERGIVSWSAMIGGLAQHGHGRQALQLFNQML 654
Query: 321 SSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQV 380
GV P+ +TLV VL AC++ G V E + FESM+ + +P EHYACM+DLLGRAG++
Sbjct: 655 KEGVSPNHITLVSVLGACNHAGLVTEAKLYFESMEELFGFKPMQEHYACMIDLLGRAGKI 714
Query: 381 EDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIY 440
+A++L+ MPFE +A +WG+LLGA R H ++L AA+ L LEP+ +G ++LL+NIY
Sbjct: 715 NEAVELVNKMPFEANASVWGALLGAARIHKDVELGRRAAEMLFILEPEKSGTHVLLANIY 774
Query: 441 ASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKI 500
AS G++ +VAE+R+ MR V K PG SWIEV+ KV+ F D SH I L+++
Sbjct: 775 ASAGKWENVAEVRRLMRDSKVKKEPGMSWIEVKDKVYTFLVGD-RSHYRSQEIYAKLDEL 833
Query: 501 GGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVC 560
L+ +AGY P LHDV++ EK L +HSEKLAVA+GL+ P+G PIRV KNLRVC
Sbjct: 834 SDLMDKAGYVPMVEIDLHDVEQSEKELLLYHHSEKLAVAFGLIATPQGAPIRVKKNLRVC 893
Query: 561 GDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
DCH+A K I K++ REII+RD NRFHHFKDG CSC DYW
Sbjct: 894 VDCHTAFKYICKIVSREIIVRDINRFHHFKDGSCSCGDYW 933
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 117/428 (27%), Positives = 210/428 (49%), Gaps = 24/428 (5%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM------PEKNVVSWTVMLGGFIRDSRID 54
+PERNVVSW A+ YV+ EA LF++M P + +S V +RDS
Sbjct: 218 IPERNVVSWNALFSCYVQIDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRG 277
Query: 55 DARR--LFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
L + + D + +V Y + G + + +F+++ + +++SW +I+G V +
Sbjct: 278 KIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLH 337
Query: 113 NRIDVARKLFEVMPEK----NEVSWTAML-----MGYTQCGRIQDAWELFKAMPMKS-VV 162
+ A +L M N + ++ L MG + GR Q L K M M+S +
Sbjct: 338 EHHEQALELLGQMKRSGICPNIFTLSSALKACAGMGLKELGR-QLHSSLMK-MDMESDLF 395
Query: 163 ASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEG 222
S ++ + ++ AR+ F+ + EKD W+ +I Y + ++E + LF M KEG
Sbjct: 396 VSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEG 455
Query: 223 VRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGK 282
+ N +L ++L A L + RQVH V+ F D+YV + LI Y KC + +
Sbjct: 456 IGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAE 515
Query: 283 LIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTG 342
IF+ D+V + S+I+ YAQYG GE++LK+F EM + PD +L+AC+
Sbjct: 516 RIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLS 575
Query: 343 KVKEGREI-FESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGS 401
++G+++ +K ++++ + +V++ + G ++DA + + E + W +
Sbjct: 576 AFEQGKQLHVHILKYGFVLDIFAGN--SLVNMYAKCGSIDDAGRAFSELT-ERGIVSWSA 632
Query: 402 LLGACRTH 409
++G H
Sbjct: 633 MIGGLAQH 640
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 130/517 (25%), Positives = 240/517 (46%), Gaps = 64/517 (12%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMP----EKNVVSWTVMLGG--FIRDSRIDDA 56
E ++VSW+A++ GY + G+ A F +M + N +++ +L ++D RI
Sbjct: 119 EPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQ 178
Query: 57 RRLFDMMP--EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNR 114
++ E DV +V+ Y + + + +FDE+P++NV+SW + S YV +
Sbjct: 179 VHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQIDF 238
Query: 115 IDVARKLFEVMP----EKNEVSWTAMLMGYTQC-----GRIQDAWELFKAMPMKSVVASN 165
A LF M + NE S ++M+ T G+I + L K ++N
Sbjct: 239 CGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGY-LIKLGYDWDPFSAN 297
Query: 166 SMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRV 225
+++ + G++ A VF+++++ D +W+ +I + + ++L M++ G+
Sbjct: 298 ALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRSGICP 357
Query: 226 NFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIF 285
N +L S L CA + + GRQ+H+ L++ + D++V+ L+ MY KC L ++ F
Sbjct: 358 NIFTLSSALKACAGMGLKELGRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAF 417
Query: 286 DNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVK 345
+ KD++ WN+IISGY+QY ++L +F EM G+ + TL +L + + V
Sbjct: 418 NLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVH 477
Query: 346 EGREIFE-SMKSKY---------LVEP--KTEH------------------YACMVDLLG 375
R++ S+KS + L++ K H + M+
Sbjct: 478 VCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYA 537
Query: 376 RAGQVEDAMKL---IEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGP 432
+ GQ E+A+KL ++ M +PD + SLL AC +L+ K L + G
Sbjct: 538 QYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACA-----NLSAFEQGKQLHVHILKYG- 591
Query: 433 YIL-------LSNIYASQGRFHDVAELRKNMRKRNVI 462
++L L N+YA G D + +R ++
Sbjct: 592 FVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTERGIV 628
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 163/325 (50%), Gaps = 10/325 (3%)
Query: 87 GREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMP----EKNEVSWTAMLMGYTQ 142
R++ DE + +++SW+ +ISGY N A F M + NE +++++L +
Sbjct: 110 ARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSI 169
Query: 143 CGRIQDAWELFKAMPMKS----VVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGM 198
++ ++ + + V +N++++ + E ++ +FD++ E++ +W+ +
Sbjct: 170 VKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNAL 229
Query: 199 IKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQF 258
Y + + E + LF M G++ N SL S+++ C L G+ +H L++ +
Sbjct: 230 FSCYVQIDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGY 289
Query: 259 DVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHE 318
D D + A+ L+ MY K G+L +F+ DIV WN++I+G + E++L++ +
Sbjct: 290 DWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQ 349
Query: 319 MFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAG 378
M SG+ P+ TL L AC+ G + GR++ S+ K +E +VD+ +
Sbjct: 350 MKRSGICPNIFTLSSALKACAGMGLKELGRQLHSSLM-KMDMESDLFVSVGLVDMYSKCD 408
Query: 379 QVEDAMKLIEAMPFEPDAIIWGSLL 403
+EDA +P E D I W +++
Sbjct: 409 LLEDARMAFNLLP-EKDLIAWNAII 432
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 73/235 (31%), Positives = 124/235 (52%), Gaps = 12/235 (5%)
Query: 180 ARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCAS 239
AR + D+ E D +WS +I Y + G + F M GV+ N + SVL C+
Sbjct: 110 ARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSI 169
Query: 240 LASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSI 299
+ L G+QVH +V F+ DV+VA+ L+ MY KC E + K +FD +++V WN++
Sbjct: 170 VKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNAL 229
Query: 300 ISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSAC-----SYTGKVKEGREIFESM 354
S Y Q +++ +F+EM SG+ P++ +L +++AC S GK+ G I
Sbjct: 230 FSCYVQIDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLI---- 285
Query: 355 KSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTH 409
K Y +P + + +VD+ + G + DA+ + E + +PD + W +++ C H
Sbjct: 286 KLGYDWDPFSAN--ALVDMYAKVGDLADAISVFEKIK-QPDIVSWNAVIAGCVLH 337
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 84/355 (23%), Positives = 145/355 (40%), Gaps = 63/355 (17%)
Query: 198 MIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQ 257
+I+ + + + + L+ K S +LS C + SL G Q+HA + +
Sbjct: 27 LIQTVPQFSQDPQTTAILNLIDKGNFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSG 86
Query: 258 FDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFH 317
D + + LI +Y KC + + D + D+V W+++ISGYAQ GLG +L FH
Sbjct: 87 LSDDPSIRNHLINLYSKCRNFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFH 146
Query: 318 EMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIF-------------------------- 351
EM GV ++ T VL ACS ++ G+++
Sbjct: 147 EMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCD 206
Query: 352 ESMKSKYLVEPKTEH--------YACMV--DLLGRAGQVEDAMKLIEAMPFEPDAIIWGS 401
E + SK L + E ++C V D G A + M L +P+ S
Sbjct: 207 EFLDSKRLFDEIPERNVVSWNALFSCYVQIDFCGEAVGLFYEMVL---SGIKPNEFSLSS 263
Query: 402 LLGACRTHMKLDLAEVAAKKLLQL----EPKNAGPYILLSNIYASQGRFHDVAELRKNMR 457
++ AC ++ L++L +P +A L ++YA G D + + ++
Sbjct: 264 MVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANA---LVDMYAKVGDLADAISVFEKIK 320
Query: 458 KRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPD 512
+ +++ SW V G CV H H + +L G ++ +G CP+
Sbjct: 321 QPDIV-----SWNAV------IAG--CVLHEHHEQALELL----GQMKRSGICPN 358
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 87/174 (50%), Gaps = 23/174 (13%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV----VSWTVMLG-----GFIRDS 51
+ ER +VSW+AM+ G + G +A LF QM ++ V ++ +LG G + ++
Sbjct: 622 LTERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGACNHAGLVTEA 681
Query: 52 RI--DDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMP-KKNVISWTTMISG 108
++ + LF P ++ A +LG + G+++E E+ ++MP + N W ++
Sbjct: 682 KLYFESMEELFGFKPMQEHYACMIDLLG--RAGKINEAVELVNKMPFEANASVWGALLGA 739
Query: 109 YVNNNRIDVARK----LFEVMPEKNEVSWTAMLMG--YTQCGRIQDAWELFKAM 156
+ +++ R+ LF + PEK S T +L+ Y G+ ++ E+ + M
Sbjct: 740 ARIHKDVELGRRAAEMLFILEPEK---SGTHVLLANIYASAGKWENVAEVRRLM 790
>gi|359482115|ref|XP_003632713.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 989
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 232/635 (36%), Positives = 356/635 (56%), Gaps = 54/635 (8%)
Query: 16 YVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF------DMMPEKDVV 69
YV+ I A F +NVV W VML + + + ++ +F +MP +
Sbjct: 359 YVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTY 418
Query: 70 AQTNMVLGYCQD-GRVDEGREIFDEMPKK----NVISWTTMISGYVNNNRIDVARKLFEV 124
+L C G +D G +I ++ K NV + +I Y + +D AR + +
Sbjct: 419 PS---ILRTCTSLGALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQR 475
Query: 125 MPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASN------------------- 165
+ E++ VSWTAM+ GYTQ +A +LF+ M + + + N
Sbjct: 476 LREEDVVSWTAMIAGYTQHDLFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQG 535
Query: 166 ------SMILGLGQN--------------GEVQKARVVFDQMREKDDATWSGMIKVYERK 205
S I G ++ G Q A + F+++ KD+ +W+ +I + +
Sbjct: 536 QQIHAQSYISGYSEDLSIGNALVSLYARCGRAQDAYLAFEKIDAKDNISWNALISGFAQS 595
Query: 206 GYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVA 265
G+ E + +F+ M + GV N + S +S A+ A++ G+Q+HA +++ +D + +
Sbjct: 596 GHCEEALQVFSQMNQAGVEANLFTFGSAVSATANTANIKQGKQIHAMMIKTGYDSETEAS 655
Query: 266 SVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVM 325
+VLIT+Y KCG + K F K++V WN++I+GY+Q+G G +++ +F EM G+M
Sbjct: 656 NVLITLYSKCGSIEDAKREFFEMPEKNVVSWNAMITGYSQHGYGSEAVSLFEEMKQLGLM 715
Query: 326 PDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMK 385
P+ VT VGVLSACS+ G V EG F SM ++ + PK EHY C+VDLLGRA + A +
Sbjct: 716 PNHVTFVGVLSACSHVGLVNEGLSYFRSMSKEHGLVPKPEHYVCVVDLLGRAALLCCARE 775
Query: 386 LIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGR 445
IE MP EPDA+IW +LL AC H +++ E AA+ LL+LEP+++ Y+LLSN+YA G+
Sbjct: 776 FIEEMPIEPDAMIWRTLLSACTVHKNIEIGEFAARHLLELEPEDSATYVLLSNMYAVSGK 835
Query: 446 FHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLR 505
+ R+ M+ R V K PG SWIEV+ +H F D + HP I ++ +
Sbjct: 836 WDYRDRTRQMMKDRGVKKEPGRSWIEVKNSIHAFFVGDRL-HPLAEQIYEYIDDLNERAG 894
Query: 506 EAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHS 565
E GY D +L+DV++E+K + HSEKLAVA+GL+ L +PIRV+KNLRVC DCH+
Sbjct: 895 EIGYVQDRYNLLNDVEQEQKDPTAYIHSEKLAVAFGLLSLTNTMPIRVIKNLRVCNDCHN 954
Query: 566 AIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
IK +SK+ R I++RDA RFHHF+ G+CSC+DYW
Sbjct: 955 WIKFVSKISNRAIVVRDAYRFHHFEGGVCSCKDYW 989
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 115/417 (27%), Positives = 201/417 (48%), Gaps = 20/417 (4%)
Query: 4 RNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVS----WTVMLGGFIRDSRIDDARRL 59
++ VSW AM+ G + G EA LF QM + V+ ++ +L + +L
Sbjct: 176 KDSVSWVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQL 235
Query: 60 FDMMPEKDVVAQT----NMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRI 115
+ + + ++T +V Y + G + +IF +M +++ IS+ ++ISG
Sbjct: 236 HGFIVKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFS 295
Query: 116 DVARKLFEVMP----EKNEVSWTAMLMGYTQCGRIQDAWELFK---AMPMKS-VVASNSM 167
D A +LFE M + + V+ ++L G +L M M S ++ S+
Sbjct: 296 DRALQLFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSL 355
Query: 168 ILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNF 227
+ + +++ A F ++ W+ M+ Y + G E +F MQ EG+ N
Sbjct: 356 LDLYVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQ 415
Query: 228 PSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDN 287
+ S+L C SL +LD G Q+H Q+++ F +VYV SVLI MY K GEL + I
Sbjct: 416 YTYPSILRTCTSLGALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQR 475
Query: 288 FASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEG 347
+D+V W ++I+GY Q+ L ++LK+F EM + G+ D++ +SAC+ + +G
Sbjct: 476 LREEDVVSWTAMIAGYTQHDLFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQG 535
Query: 348 REIF-ESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
++I +S S Y + + +V L R G+ +DA E + D I W +L+
Sbjct: 536 QQIHAQSYISGYSEDLSIGN--ALVSLYARCGRAQDAYLAFEKID-AKDNISWNALI 589
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 133/565 (23%), Positives = 250/565 (44%), Gaps = 68/565 (12%)
Query: 36 NVVSWTVMLGGFIRDSRIDDAR----RLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIF 91
NV ++ + G + DA+ R+F + + V + ++ Y G VD ++F
Sbjct: 9 NVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGEVDNAIKLF 68
Query: 92 DEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKN----EVSWTAMLMGYTQCGRIQ 147
D++P NV W +ISG + LF +M +N E ++ ++L C +
Sbjct: 69 DDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRA---CSGGK 125
Query: 148 DAWELFKAMPMK--------SVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMI 199
+++ + + K S + N +I +NG V A++VF+++ KD +W MI
Sbjct: 126 APFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAMI 185
Query: 200 KVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFD 259
+ G E E I LF M K V SVLS C + G Q+H +V+
Sbjct: 186 SGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGLS 245
Query: 260 VDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEM 319
+ +V + L+T+Y + G L+ + IF +D + +NS+ISG AQ G +++L++F +M
Sbjct: 246 SETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQLFEKM 305
Query: 320 FSSGVMPDDVTLVGVLSACSYTGKVKEGREIFE-----SMKS------------------ 356
+ PD VT+ +LSAC+ G +G+++ M S
Sbjct: 306 QLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDI 365
Query: 357 ----KYLVEPKTEH---YACMVDLLGRAGQVEDAMKLIEAMPFE---PDAIIWGSLLGAC 406
+Y + +TE+ + M+ G+ G + ++ + M E P+ + S+L C
Sbjct: 366 ETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTC 425
Query: 407 RTHMKLDLAEVAAKKLLQLEPK-NAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPP 465
+ LDL E ++++ + N +L ++YA G + + +R+ +V+
Sbjct: 426 TSLGALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRLREEDVV--- 482
Query: 466 GCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFV--LHDVDEE 523
SW + + +T D + E + + +E G G+ S + +++
Sbjct: 483 --SWTAM---IAGYTQHDLFA--EALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQG 535
Query: 524 EKVHSLRY---HSEKLAVAYGLVKL 545
+++H+ Y +SE L++ LV L
Sbjct: 536 QQIHAQSYISGYSEDLSIGNALVSL 560
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 102/466 (21%), Positives = 209/466 (44%), Gaps = 63/466 (13%)
Query: 16 YVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNM- 74
Y+ G + A LF +P NV W ++ G + LF +M ++V +
Sbjct: 55 YLAHGEVDNAIKLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTF 114
Query: 75 --VLGYCQDGRVDEGREIFDEMPKKNV--------ISWTTMISGYVNNNRIDVARKLFEV 124
VL C G+ ++ +++ K + + +I Y N +D+A+ +FE
Sbjct: 115 ASVLRACSGGKAP--FQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFER 172
Query: 125 MPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVAS-------------------- 164
+ K+ VSW AM+ G +Q GR +A LF M +V+ +
Sbjct: 173 LFLKDSVSWVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLG 232
Query: 165 -------------------NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERK 205
N+++ + G + A +F +M +D +++ +I ++
Sbjct: 233 EQLHGFIVKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQR 292
Query: 206 GYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVA 265
G+ + LF MQ + ++ + ++ S+LS CAS+ + G+Q+H+ +++ D+ +
Sbjct: 293 GFSDRALQLFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIE 352
Query: 266 SVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVM 325
L+ +Y+KC ++ F ++++V+WN ++ Y Q G +S +F +M G+M
Sbjct: 353 GSLLDLYVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLM 412
Query: 326 PDDVTLVGVLSACSYTGKVKEGREIF-ESMKSKYLVEPKTEHYAC--MVDLLGRAGQVED 382
P+ T +L C+ G + G +I + +KS + + Y C ++D+ + G+++
Sbjct: 413 PNQYTYPSILRTCTSLGALDLGEQIHTQVIKSGF----QFNVYVCSVLIDMYAKHGELDT 468
Query: 383 AMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPK 428
A +++ + E D + W +++ H DL A K ++E +
Sbjct: 469 ARGILQRLR-EEDVVSWTAMIAGYTQH---DLFAEALKLFQEMENQ 510
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 119/272 (43%), Gaps = 51/272 (18%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTV------------------ 42
+ E +VVSWTAM+ GY + + EA LF +M + + S +
Sbjct: 476 LREEDVVSWTAMIAGYTQHDLFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQG 535
Query: 43 ---------------------MLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQD 81
++ + R R DA F+ + KD ++ ++ G+ Q
Sbjct: 536 QQIHAQSYISGYSEDLSIGNALVSLYARCGRAQDAYLAFEKIDAKDNISWNALISGFAQS 595
Query: 82 GRVDEGREIFDEMPK----KNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWT--- 134
G +E ++F +M + N+ ++ + +S N I +++ +M + S T
Sbjct: 596 GHCEEALQVFSQMNQAGVEANLFTFGSAVSATANTANIKQGKQIHAMMIKTGYDSETEAS 655
Query: 135 -AMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMRE---- 189
++ Y++CG I+DA F MP K+VV+ N+MI G Q+G +A +F++M++
Sbjct: 656 NVLITLYSKCGSIEDAKREFFEMPEKNVVSWNAMITGYSQHGYGSEAVSLFEEMKQLGLM 715
Query: 190 KDDATWSGMIKVYERKGYELEVIDLFTLMQKE 221
+ T+ G++ G E + F M KE
Sbjct: 716 PNHVTFVGVLSACSHVGLVNEGLSYFRSMSKE 747
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 99/201 (49%), Gaps = 7/201 (3%)
Query: 218 MQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGE 277
M++ G+R N + + + C + SL +++HA++ + FD + + S LI +Y+ GE
Sbjct: 1 MEERGIRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGE 60
Query: 278 LVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSA 337
+ +FD+ S ++ WN +ISG L + L +F M + V PD+ T VL A
Sbjct: 61 VDNAIKLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRA 120
Query: 338 CSYTGKVKEGREIFESMKSKYLVEP-KTEHYAC--MVDLLGRAGQVEDAMKLIEAMPFEP 394
CS GK ++ E + +K + + C ++DL + G V D KL+ F
Sbjct: 121 CS-GGKAP--FQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHV-DLAKLVFERLFLK 176
Query: 395 DAIIWGSLLGACRTHMKLDLA 415
D++ W +++ + + D A
Sbjct: 177 DSVSWVAMISGLSQNGREDEA 197
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 69/143 (48%), Gaps = 18/143 (12%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPE----KNVVSWTVMLGGFIRDSRIDDA 56
MPE+NVVSW AM+ GY + G +EA +LF +M + N V++ +L +++
Sbjct: 678 MPEKNVVSWNAMITGYSQHGYGSEAVSLFEEMKQLGLMPNHVTFVGVLSACSHVGLVNEG 737
Query: 57 RRLFDMM-------PEKDVVAQTNMVLGYCQDGRVDEGREIFDEMP-KKNVISWTTMISG 108
F M P+ + +LG + + RE +EMP + + + W T++S
Sbjct: 738 LSYFRSMSKEHGLVPKPEHYVCVVDLLG--RAALLCCAREFIEEMPIEPDAMIWRTLLSA 795
Query: 109 YVNNNRIDV----ARKLFEVMPE 127
+ I++ AR L E+ PE
Sbjct: 796 CTVHKNIEIGEFAARHLLELEPE 818
>gi|296088738|emb|CBI38188.3| unnamed protein product [Vitis vinifera]
Length = 744
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 236/655 (36%), Positives = 375/655 (57%), Gaps = 64/655 (9%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMP----EKNVVSWTVMLGGFIRDSRIDDA 56
MPERN +S+ +++GY E EA LF ++ E N +T +L + D
Sbjct: 99 MPERNTISFVTLIQGYAESVRFLEAIELFVRLHREGHELNPFVFTTILKLLVST----DC 154
Query: 57 RRL--------FDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISG 108
L F + E + T ++ Y GRVD RE+FD + K+++SWT M++
Sbjct: 155 GELGWGIHACIFKLGHESNAFVGTALIDAYSVCGRVDVAREVFDGILYKDMVSWTGMVTC 214
Query: 109 YVNNNRIDVARKLFEVMP----EKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVAS 164
+ N+ A KLF M + N ++ ++ + C ++ A+++ K++ ++ +
Sbjct: 215 FAENDCFKEALKLFSQMRMVGFKPNNFTFASV---FKACLGLE-AFDVGKSVHGCALKSR 270
Query: 165 NSMILGLG--------QNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFT 216
+ L +G ++G++ AR F+++ +KD WS MI Y + E +++F
Sbjct: 271 YELDLYVGVALLDLYTKSGDIDDARRAFEEIPKKDVIPWSFMIARYAQSDQSKEAVEMFF 330
Query: 217 LMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCG 276
M++ V N + SVL CA++ L+ G Q+H +++ DV+V++ L+ +Y KCG
Sbjct: 331 QMRQALVLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCG 390
Query: 277 ELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMF---------------- 320
+ +F ++ V WN++I G+ Q G GEK+L++F M
Sbjct: 391 RMENSMELFAESPHRNDVTWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALR 450
Query: 321 ---------------SSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTE 365
S V PD +T VGVLSAC+ G + +G+ F SM + +EP E
Sbjct: 451 ACASLAALEPGLQIHSLTVKPDKLTFVGVLSACANAGLLDQGQAYFTSMIQDHGIEPCIE 510
Query: 366 HYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQL 425
HY CMV LLGR G ++ A+KLI+ +PF+P ++W +LLGAC H ++L ++A+++L++
Sbjct: 511 HYTCMVWLLGRGGHLDKAVKLIDEIPFQPSVMVWRALLGACVIHNDIELGRISAQRVLEM 570
Query: 426 EPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCV 485
EP++ ++LLSN+YA+ R+ +VA +RKNM+++ V K PG SWIE + VH FT D
Sbjct: 571 EPQDKATHVLLSNMYATAKRWDNVASVRKNMKRKGVKKEPGLSWIESQGTVHSFTVGD-T 629
Query: 486 SHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKL 545
SHPE +I MLE + ++AGY P+ + VL DV++EEK L HSE+LA+++G+++
Sbjct: 630 SHPEVRVINGMLEWLHMKTKKAGYIPNYNVVLLDVEDEEKERLLWVHSERLALSFGIIRT 689
Query: 546 PEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
P G PIR+MKNLR+C DCH+AIK ISKV+ REI++RD NRFHHF++GLCSC DYW
Sbjct: 690 PSGSPIRIMKNLRICVDCHAAIKCISKVVQREIVVRDINRFHHFQEGLCSCGDYW 744
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 96/399 (24%), Positives = 186/399 (46%), Gaps = 48/399 (12%)
Query: 70 AQTNMVLGYCQDGRVDEGREIFDEMPKK----NVISWTTMISGYVNNNRIDVARKLFEVM 125
A N + Q G+ + E+ K+ ++ +W +++ YV ++ + A KLF+ M
Sbjct: 40 AYANALQDCIQKDEPSRGKGLHCEILKRGGCLDLFAWNILLNMYVKSDFLCDASKLFDEM 99
Query: 126 PEKNEVSWTAMLMGYTQCGRIQDAWELFKAMP--------------MKSVVASNSMILGL 171
PE+N +S+ ++ GY + R +A ELF + +K +V+++ LG
Sbjct: 100 PERNTISFVTLIQGYAESVRFLEAIELFVRLHREGHELNPFVFTTILKLLVSTDCGELGW 159
Query: 172 GQN-------------------------GEVQKARVVFDQMREKDDATWSGMIKVYERKG 206
G + G V AR VFD + KD +W+GM+ +
Sbjct: 160 GIHACIFKLGHESNAFVGTALIDAYSVCGRVDVAREVFDGILYKDMVSWTGMVTCFAEND 219
Query: 207 YELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVAS 266
E + LF+ M+ G + N + SV C L + D G+ VH ++ ++++D+YV
Sbjct: 220 CFKEALKLFSQMRMVGFKPNNFTFASVFKACLGLEAFDVGKSVHGCALKSRYELDLYVGV 279
Query: 267 VLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMP 326
L+ +Y K G++ + F+ KD++ W+ +I+ YAQ ++++++F +M + V+P
Sbjct: 280 ALLDLYTKSGDIDDARRAFEEIPKKDVIPWSFMIARYAQSDQSKEAVEMFFQMRQALVLP 339
Query: 327 DDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKL 386
+ T VL AC+ + G +I K + ++D+ + G++E++M+L
Sbjct: 340 NQFTFASVLQACATMEGLNLGNQI-HCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMEL 398
Query: 387 IEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQL 425
P D + W +++ H++L E A + L +
Sbjct: 399 FAESPHRND-VTWNTVIVG---HVQLGDGEKALRLFLNM 433
Score = 47.4 bits (111), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 53/279 (18%), Positives = 109/279 (39%), Gaps = 50/279 (17%)
Query: 226 NFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIF 285
N + + L C G+ +H ++++ +D++ ++L+ MY+K L +F
Sbjct: 37 NSHAYANALQDCIQKDEPSRGKGLHCEILKRGGCLDLFAWNILLNMYVKSDFLCDASKLF 96
Query: 286 DNFASKDIVMWNSIISGYAQYGLGEKSLKVF-------HEM------------------- 319
D ++ + + ++I GYA+ +++++F HE+
Sbjct: 97 DEMPERNTISFVTLIQGYAESVRFLEAIELFVRLHREGHELNPFVFTTILKLLVSTDCGE 156
Query: 320 ---------FSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACM 370
F G + ++ A S G+V RE+F+ + K +V + M
Sbjct: 157 LGWGIHACIFKLGHESNAFVGTALIDAYSVCGRVDVAREVFDGILYKDMVS-----WTGM 211
Query: 371 VDLLGRAGQVEDAMKLIEAM---PFEPDAIIWGSLLGACRTHMKLDLAE----VAAKKLL 423
V ++A+KL M F+P+ + S+ AC D+ + A K
Sbjct: 212 VTCFAENDCFKEALKLFSQMRMVGFKPNNFTFASVFKACLGLEAFDVGKSVHGCALKSRY 271
Query: 424 QLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVI 462
+L+ + L ++Y G D + + K++VI
Sbjct: 272 ELDLYVG---VALLDLYTKSGDIDDARRAFEEIPKKDVI 307
>gi|225446691|ref|XP_002277494.1| PREDICTED: pentatricopeptide repeat-containing protein At2g41080
[Vitis vinifera]
Length = 657
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 227/593 (38%), Positives = 351/593 (59%), Gaps = 40/593 (6%)
Query: 16 YVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMV 75
Y + G + A TLF MP KN++S +++ G+ R AR++FD MPE++V MV
Sbjct: 97 YSKCGQLDTAITLFGVMPRKNIMSCNILINGYFRSGDWVTARKMFDEMPERNVATWNAMV 156
Query: 76 LGYCQDGRVDEGREIFDEMPKKNVI----SWTTMISGYVNNNRIDVARKLFEVMP----E 127
G Q +EG +F M + + + +++ G + R++ + E
Sbjct: 157 AGLIQFEFNEEGLGLFSRMNELGFLPDEFALGSVLRGCAGLRALVAGRQVHGYVRKCGFE 216
Query: 128 KNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQM 187
N V +++ Y +CG + + L +AMP ++VVA N++I G QN
Sbjct: 217 FNLVVVSSLAHMYMKCGSLGEGERLIRAMPSQNVVAWNTLIAGRAQN------------- 263
Query: 188 REKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGR 247
GY EV+D + +M+ G R + + +SV+S C+ LA+L G+
Sbjct: 264 ------------------GYPEEVLDQYNMMKMAGFRPDKITFVSVISSCSELATLGQGQ 305
Query: 248 QVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYG 307
Q+HA++++ + V V S LI+MY +CG L +F + D+V W+S+I+ Y +G
Sbjct: 306 QIHAEVIKAGASLIVSVISSLISMYSRCGCLEYSLKVFLECENGDVVCWSSMIAAYGFHG 365
Query: 308 LGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHY 367
G +++ +F++M + +DVT + +L ACS+ G ++G + F+ M KY V+P+ EHY
Sbjct: 366 RGVEAIDLFNQMEQEKLEANDVTFLSLLYACSHCGLKEKGIKFFDLMVEKYGVKPRLEHY 425
Query: 368 ACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEP 427
CMVDLLGR G VE+A LI +MP + D I W +LL AC+ H K ++A ++++ +L+P
Sbjct: 426 TCMVDLLGRYGSVEEAEALIRSMPVKADVITWKTLLSACKIHKKTEMARRISEEVFRLDP 485
Query: 428 KNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSH 487
++ PY+LLSNI+AS R+ DV+++RK MR R + K PG SW+EV+ ++H F D SH
Sbjct: 486 RDPVPYVLLSNIHASDKRWDDVSDVRKAMRDRKLKKEPGISWLEVKNQIHQFCMGD-KSH 544
Query: 488 PEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPE 547
P+ I L ++ +++ GY PD VLHD+D E+K +SL +HSEKLA+A+ L+ P
Sbjct: 545 PKSVEIASYLRELTSEMKKRGYVPDIDSVLHDMDVEDKEYSLVHHSEKLAIAFALLYTPV 604
Query: 548 GVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
G PIRV+KNLRVC DCH AIK IS++ REII+RD++RFHHFK+G CSC DYW
Sbjct: 605 GTPIRVIKNLRVCSDCHVAIKYISEISNREIIVRDSSRFHHFKNGRCSCGDYW 657
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 83/370 (22%), Positives = 158/370 (42%), Gaps = 51/370 (13%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MP +N++S ++ GY G A +F +MPE+NV +W M+ G I+ ++ LF
Sbjct: 113 MPRKNIMSCNILINGYFRSGDWVTARKMFDEMPERNVATWNAMVAGLIQFEFNEEGLGLF 172
Query: 61 DMMPE----KDVVAQTNMVLGYCQDGRVDEGREIFDEMPKK----NVISWTTMISGYVNN 112
M E D A +++ G + GR++ + K N++ +++ Y+
Sbjct: 173 SRMNELGFLPDEFALGSVLRGCAGLRALVAGRQVHGYVRKCGFEFNLVVVSSLAHMYMKC 232
Query: 113 NRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMK----------SVV 162
+ +L MP +N V+W ++ G Q G ++ + + M M SV+
Sbjct: 233 GSLGEGERLIRAMPSQNVVAWNTLIAGRAQNGYPEEVLDQYNMMKMAGFRPDKITFVSVI 292
Query: 163 ASNSMILGLGQ----NGEVQKARV-------------------------VFDQMREKDDA 193
+S S + LGQ + EV KA VF + D
Sbjct: 293 SSCSELATLGQGQQIHAEVIKAGASLIVSVISSLISMYSRCGCLEYSLKVFLECENGDVV 352
Query: 194 TWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQL 253
WS MI Y G +E IDLF M++E + N + +S+L C+ + G + +
Sbjct: 353 CWSSMIAAYGFHGRGVEAIDLFNQMEQEKLEANDVTFLSLLYACSHCGLKEKGIKFFDLM 412
Query: 254 VRCQFDVDVYVA--SVLITMYIKCGELVKGKLIFDNFASK-DIVMWNSIISGYAQYGLGE 310
V ++ V + + ++ + + G + + + + + K D++ W +++S + E
Sbjct: 413 VE-KYGVKPRLEHYTCMVDLLGRYGSVEEAEALIRSMPVKADVITWKTLLSACKIHKKTE 471
Query: 311 KSLKVFHEMF 320
+ ++ E+F
Sbjct: 472 MARRISEEVF 481
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 94/210 (44%), Gaps = 34/210 (16%)
Query: 228 PSLIS-VLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGEL-------- 278
PSL S +L C S SL G+Q+H+ ++ D ++++ L+ +Y KCG+L
Sbjct: 52 PSLFSHLLQSCISENSLSLGKQLHSLIITSGCSSDKFISNHLLNLYSKCGQLDTAITLFG 111
Query: 279 -----------------------VKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKV 315
V + +FD +++ WN++++G Q+ E+ L +
Sbjct: 112 VMPRKNIMSCNILINGYFRSGDWVTARKMFDEMPERNVATWNAMVAGLIQFEFNEEGLGL 171
Query: 316 FHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLG 375
F M G +PD+ L VL C+ + GR++ ++ K E + + +
Sbjct: 172 FSRMNELGFLPDEFALGSVLRGCAGLRALVAGRQVHGYVR-KCGFEFNLVVVSSLAHMYM 230
Query: 376 RAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
+ G + + +LI AMP + + + W +L+
Sbjct: 231 KCGSLGEGERLIRAMPSQ-NVVAWNTLIAG 259
>gi|449458017|ref|XP_004146744.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Cucumis sativus]
Length = 678
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 228/606 (37%), Positives = 350/606 (57%), Gaps = 21/606 (3%)
Query: 12 MVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMM------PE 65
++R Y +G + A +F + EKNVV + VM+ ++ ++ +A +F +M P+
Sbjct: 77 LMRAYSAQGETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVMLSCAFNPD 136
Query: 66 KDVVAQTNMVLGYCQD-GRVDEGREIFDEMPK----KNVISWTTMISGYVNNNRIDVARK 120
VL C + G ++ D + K N+ +++ Y + ARK
Sbjct: 137 HYTFP---CVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARK 193
Query: 121 LFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSV------VASNSMILGLGQN 174
+ + MP ++ VSW +M+ GY Q G+ DA E+ K M ++ +AS S ++
Sbjct: 194 VLDQMPYRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMASLSPVVCYTSL 253
Query: 175 GEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVL 234
VQ +F++M +K+ +W+ MI +Y E + LF M++ G++ + ++ S+L
Sbjct: 254 ENVQYIHNMFERMTKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLL 313
Query: 235 SVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIV 294
C L++L GR++H + + ++ + + L+ MY KCG L + + +FD +D+V
Sbjct: 314 PACGDLSALFLGRRLHKYIEKGNLRPNLLLENALLDMYAKCGCLEEARDVFDKMRLRDVV 373
Query: 295 MWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESM 354
W S++S Y + G G ++ +F +M SG PD + V VLSACS+TG + +GR F M
Sbjct: 374 SWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVLSACSHTGLLDQGRHYFRMM 433
Query: 355 KSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDL 414
+Y + P+ EH+ACMVDL GRAG+VE+A I+ MP EP+ +WG+LL ACR H K+D+
Sbjct: 434 TEQYGIVPRIEHFACMVDLFGRAGEVEEAYSFIKQMPMEPNERVWGALLSACRVHSKMDI 493
Query: 415 AEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEK 474
VAA L QL PK +G Y+LLSNIYA G + DV +R M+K + K PG S +E+
Sbjct: 494 GLVAADLLFQLAPKQSGYYVLLSNIYAKAGMWKDVMNVRYAMKKIGIKKVPGISNVELNG 553
Query: 475 KVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSE 534
+VH F D HP+ I L+ + G ++E GY P + LHDV+ E+K L HSE
Sbjct: 554 QVHTFLAGD-QYHPQAKNIYGELDVLVGKMKELGYIPQTESALHDVEVEDKECHLAIHSE 612
Query: 535 KLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLC 594
KLA+ + ++ +G PIR+ KNLRVCGDCH AIKLISK++ R II+RD NRFHHF +G+C
Sbjct: 613 KLAIVFAILNTKQGTPIRITKNLRVCGDCHIAIKLISKIVSRNIIVRDCNRFHHFSNGIC 672
Query: 595 SCRDYW 600
SC DYW
Sbjct: 673 SCGDYW 678
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 128/266 (48%), Gaps = 26/266 (9%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRL--- 59
+ N+ A+V Y + G + EA + QMP ++VVSW M+ G+ + + DDA +
Sbjct: 169 DTNLFIGNALVAMYGKCGCLREARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEICKE 228
Query: 60 ---FDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRID 116
++ + +A + V+ Y V +F+ M KKN+ISW MI+ YVNN+ +
Sbjct: 229 MDSLNLNHDAGTMASLSPVVCYTSLENVQYIHNMFERMTKKNLISWNVMIAIYVNNSMPN 288
Query: 117 VARKLFEVMPE----KNEVSWTAMLMGYTQCGRIQDAWELF----------KAMPMKSVV 162
A LF M E + V+ ++L CG D LF K +++
Sbjct: 289 EAVSLFLQMEECGMKPDAVTIASLL---PACG---DLSALFLGRRLHKYIEKGNLRPNLL 342
Query: 163 ASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEG 222
N+++ + G +++AR VFD+MR +D +W+ M+ Y R G + + LF M G
Sbjct: 343 LENALLDMYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSG 402
Query: 223 VRVNFPSLISVLSVCASLASLDHGRQ 248
+ + +SVLS C+ LD GR
Sbjct: 403 QNPDSIAFVSVLSACSHTGLLDQGRH 428
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 102/219 (46%), Gaps = 6/219 (2%)
Query: 248 QVHAQLV-RCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQY 306
++H+++V +D +A L+ Y GE + IFD K++V +N +I Y
Sbjct: 56 KLHSKIVINEHLRIDPTLAIKLMRAYSAQGETSVARYIFDRSLEKNVVFFNVMIRSYVNN 115
Query: 307 GLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEH 366
L ++L +F M S PD T VL ACS ++ G ++ +++ K ++
Sbjct: 116 NLYVEALSIFQVMLSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAI-VKVGLDTNLFI 174
Query: 367 YACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLE 426
+V + G+ G + +A K+++ MP+ D + W S++ + D A K++ L
Sbjct: 175 GNALVAMYGKCGCLREARKVLDQMPYR-DVVSWNSMVAGYAQSGQFDDALEICKEMDSLN 233
Query: 427 -PKNAGPYILLSNI--YASQGRFHDVAELRKNMRKRNVI 462
+AG LS + Y S + + + M K+N+I
Sbjct: 234 LNHDAGTMASLSPVVCYTSLENVQYIHNMFERMTKKNLI 272
>gi|356502788|ref|XP_003520198.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Glycine max]
Length = 923
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 223/638 (34%), Positives = 355/638 (55%), Gaps = 48/638 (7%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEK--- 66
A++ Y + G + +AG +F M ++ VSW +L G +++ DA F M
Sbjct: 287 NALIAMYAKCGRMEDAGRVFESMLCRDYVSWNTLLSGLVQNELYSDALNYFRDMQNSGQK 346
Query: 67 -DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVIS----WTTMISGYVNNNRIDVARKL 121
D V+ N++ + G + +G+E+ + + S T++ Y +
Sbjct: 347 PDQVSVLNLIAASGRSGNLLKGKEVHAYAIRNGLDSNMQIGNTLVDMYAKCCCVKYMGHA 406
Query: 122 FEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKS--------------------- 160
FE M EK+ +SWT ++ GY Q +A LF+ + +K
Sbjct: 407 FECMHEKDLISWTTIIAGYAQNEFHLEAINLFRKVQVKGMDVDPMMIGSVLRACSGLKSR 466
Query: 161 -----------------VVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYE 203
++ N+++ G+ G + AR F+ +R KD +W+ MI
Sbjct: 467 NFIREIHGYVFKRDLADIMLQNAIVNVYGEVGHIDYARRAFESIRSKDIVSWTSMITCCV 526
Query: 204 RKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVY 263
G +E ++LF +++ ++ + ++IS LS A+L+SL G+++H L+R F ++
Sbjct: 527 HNGLPVEALELFYSLKQTNIQPDSIAIISALSATANLSSLKKGKEIHGFLIRKGFFLEGP 586
Query: 264 VASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSG 323
+AS L+ MY CG + + +F + +D+++W S+I+ +G G K++ +F +M
Sbjct: 587 IASSLVDMYACCGTVENSRKMFHSVKQRDLILWTSMINANGMHGCGNKAIALFKKMTDQN 646
Query: 324 VMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDA 383
V+PD +T + +L ACS++G + EG+ FE MK Y +EP EHYACMVDLL R+ +E+A
Sbjct: 647 VIPDHITFLALLYACSHSGLMVEGKRFFEIMKYGYQLEPWPEHYACMVDLLSRSNSLEEA 706
Query: 384 MKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQ 443
+ MP +P + IW +LLGAC H +L E+AAK+LLQ + +N+G Y L+SNI+A+
Sbjct: 707 YHFVRNMPIKPSSEIWCALLGACHIHSNKELGELAAKELLQSDTENSGKYALISNIFAAD 766
Query: 444 GRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGL 503
GR++DV E+R M+ + K PGCSWIEV+ K+H F RD SHP+ I L + L
Sbjct: 767 GRWNDVEEVRLRMKGNGLKKNPGCSWIEVDNKIHTFMARD-KSHPQTDDIYLKLAQFTKL 825
Query: 504 L-REAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGD 562
L ++ GY + FV H+V EEEK L HSE+LA+ YGL+ P+G IR+ KNLR+C D
Sbjct: 826 LEKKGGYIAQTKFVFHNVSEEEKTQMLYGHSERLALGYGLLVTPKGTCIRITKNLRICDD 885
Query: 563 CHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
CH+ K+ S+V R +++RDANRFHHF+ GLCSC D+W
Sbjct: 886 CHTFFKIASEVSQRPLVVRDANRFHHFERGLCSCGDFW 923
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 107/428 (25%), Positives = 209/428 (48%), Gaps = 25/428 (5%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPE----KNVVSWTVMLGGFIRDSRIDDA 56
M + + VSW +++ +V EG EA +LF +M E N ++ L G S +
Sbjct: 208 MEKEDTVSWNSIISAHVAEGNCLEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLG 267
Query: 57 RRLFDMMPEK----DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+ + + DV ++ Y + GR+++ +F+ M ++ +SW T++SG V N
Sbjct: 268 MGIHGAVLKSNHFADVYVANALIAMYAKCGRMEDAGRVFESMLCRDYVSWNTLLSGLVQN 327
Query: 113 NRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVAS---- 164
A F M ++VS ++ + G + E+ A +++ + S
Sbjct: 328 ELYSDALNYFRDMQNSGQKPDQVSVLNLIAASGRSGNLLKGKEV-HAYAIRNGLDSNMQI 386
Query: 165 -NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGV 223
N+++ + V+ F+ M EKD +W+ +I Y + + LE I+LF +Q +G+
Sbjct: 387 GNTLVDMYAKCCCVKYMGHAFECMHEKDLISWTTIIAGYAQNEFHLEAINLFRKVQVKGM 446
Query: 224 RVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKL 283
V+ + SVL C+ L S + R++H + + D+ + + ++ +Y + G + +
Sbjct: 447 DVDPMMIGSVLRACSGLKSRNFIREIHGYVFKRDL-ADIMLQNAIVNVYGEVGHIDYARR 505
Query: 284 IFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGK 343
F++ SKDIV W S+I+ GL ++L++F+ + + + PD + ++ LSA +
Sbjct: 506 AFESIRSKDIVSWTSMITCCVHNGLPVEALELFYSLKQTNIQPDSIAIISALSATANLSS 565
Query: 344 VKEGREI--FESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGS 401
+K+G+EI F K +L P + +VD+ G VE++ K+ ++ + D I+W S
Sbjct: 566 LKKGKEIHGFLIRKGFFLEGPIA---SSLVDMYACCGTVENSRKMFHSVK-QRDLILWTS 621
Query: 402 LLGACRTH 409
++ A H
Sbjct: 622 MINANGMH 629
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 98/402 (24%), Positives = 196/402 (48%), Gaps = 24/402 (5%)
Query: 72 TNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMP----E 127
T +VL Y + G + + ++FDEM ++ + SW ++ +V++ + A +L++ M
Sbjct: 83 TKLVLMYGKCGSLRDAVKVFDEMSERTIFSWNALMGAFVSSGKYLEAIELYKDMRVLGVA 142
Query: 128 KNEVSWTAMLMGYTQCGRIQDAWEL----FKAMPMKSVVASNSMILGLGQNGEVQKARVV 183
+ ++ ++L G + E+ K + V N++I G+ G++ ARV+
Sbjct: 143 IDACTFPSVLKACGALGESRLGAEIHGVAVKCGYGEFVFVCNALIAMYGKCGDLGGARVL 202
Query: 184 FD--QMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLA 241
FD M ++D +W+ +I + +G LE + LF MQ+ GV N + ++ L +
Sbjct: 203 FDGIMMEKEDTVSWNSIISAHVAEGNCLEALSLFRRMQEVGVASNTYTFVAALQGVEDPS 262
Query: 242 SLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIIS 301
+ G +H +++ DVYVA+ LI MY KCG + +F++ +D V WN+++S
Sbjct: 263 FVKLGMGIHGAVLKSNHFADVYVANALIAMYAKCGRMEDAGRVFESMLCRDYVSWNTLLS 322
Query: 302 GYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVE 361
G Q L +L F +M +SG PD V+++ +++A +G + +G+E+ + + ++
Sbjct: 323 GLVQNELYSDALNYFRDMQNSGQKPDQVSVLNLIAASGRSGNLLKGKEV-HAYAIRNGLD 381
Query: 362 PKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKK 421
+ +VD+ + V+ E M E D I W +++ A + L + +
Sbjct: 382 SNMQIGNTLVDMYAKCCCVKYMGHAFECM-HEKDLISWTTII-AGYAQNEFHLEAINLFR 439
Query: 422 LLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIK 463
+Q++ + P ++ S + A G ++ RN I+
Sbjct: 440 KVQVKGMDVDPMMIGSVLRACSG-----------LKSRNFIR 470
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 125/247 (50%), Gaps = 6/247 (2%)
Query: 160 SVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQ 219
S + ++L G+ G ++ A VFD+M E+ +W+ ++ + G LE I+L+ M+
Sbjct: 78 SAFLATKLVLMYGKCGSLRDAVKVFDEMSERTIFSWNALMGAFVSSGKYLEAIELYKDMR 137
Query: 220 KEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELV 279
GV ++ + SVL C +L G ++H V+C + V+V + LI MY KCG+L
Sbjct: 138 VLGVAIDACTFPSVLKACGALGESRLGAEIHGVAVKCGYGEFVFVCNALIAMYGKCGDLG 197
Query: 280 KGKLIFDNF--ASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSA 337
+++FD +D V WNSIIS + G ++L +F M GV + T V L
Sbjct: 198 GARVLFDGIMMEKEDTVSWNSIISAHVAEGNCLEALSLFRRMQEVGVASNTYTFVAALQG 257
Query: 338 CSYTGKVKEGREIFES-MKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDA 396
VK G I + +KS + + + ++ + + G++EDA ++ E+M D
Sbjct: 258 VEDPSFVKLGMGIHGAVLKSNHFADVYVAN--ALIAMYAKCGRMEDAGRVFESM-LCRDY 314
Query: 397 IIWGSLL 403
+ W +LL
Sbjct: 315 VSWNTLL 321
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 101/448 (22%), Positives = 200/448 (44%), Gaps = 56/448 (12%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF-DM------ 62
T +V Y + G + +A +F +M E+ + SW ++G F+ + +A L+ DM
Sbjct: 83 TKLVLMYGKCGSLRDAVKVFDEMSERTIFSWNALMGAFVSSGKYLEAIELYKDMRVLGVA 142
Query: 63 ---------------MPEKDVVAQTN-----------------MVLGYCQDGRVDEGREI 90
+ E + A+ + ++ Y + G + R +
Sbjct: 143 IDACTFPSVLKACGALGESRLGAEIHGVAVKCGYGEFVFVCNALIAMYGKCGDLGGARVL 202
Query: 91 FDE--MPKKNVISWTTMISGYVNNNRIDVARKLFEVMPE----KNEVSWTAMLMG----- 139
FD M K++ +SW ++IS +V A LF M E N ++ A L G
Sbjct: 203 FDGIMMEKEDTVSWNSIISAHVAEGNCLEALSLFRRMQEVGVASNTYTFVAALQGVEDPS 262
Query: 140 YTQCGR-IQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGM 198
+ + G I A + K+ V +N++I + G ++ A VF+ M +D +W+ +
Sbjct: 263 FVKLGMGIHGA--VLKSNHFADVYVANALIAMYAKCGRMEDAGRVFESMLCRDYVSWNTL 320
Query: 199 IKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQF 258
+ + + ++ F MQ G + + S++++++ +L G++VHA +R
Sbjct: 321 LSGLVQNELYSDALNYFRDMQNSGQKPDQVSVLNLIAASGRSGNLLKGKEVHAYAIRNGL 380
Query: 259 DVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHE 318
D ++ + + L+ MY KC + F+ KD++ W +II+GYAQ +++ +F +
Sbjct: 381 DSNMQIGNTLVDMYAKCCCVKYMGHAFECMHEKDLISWTTIIAGYAQNEFHLEAINLFRK 440
Query: 319 MFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAG 378
+ G+ D + + VL ACS REI + + L + ++ +V++ G G
Sbjct: 441 VQVKGMDVDPMMIGSVLRACSGLKSRNFIREIHGYVFKRDLADIMLQN--AIVNVYGEVG 498
Query: 379 QVEDAMKLIEAMPFEPDAIIWGSLLGAC 406
++ A + E++ D + W S++ C
Sbjct: 499 HIDYARRAFESIR-SKDIVSWTSMITCC 525
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 89/177 (50%), Gaps = 10/177 (5%)
Query: 233 VLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKD 292
+L +C + +L G+Q+HA L++ + ++A+ L+ MY KCG L +FD + +
Sbjct: 52 LLDLCVAAKALPQGQQLHALLLKSH--LSAFLATKLVLMYGKCGSLRDAVKVFDEMSERT 109
Query: 293 IVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFE 352
I WN+++ + G ++++++ +M GV D T VL AC G+ + G EI
Sbjct: 110 IFSWNALMGAFVSSGKYLEAIELYKDMRVLGVAIDACTFPSVLKACGALGESRLGAEIHG 169
Query: 353 -SMKSKYLVEPKTEHYAC--MVDLLGRAGQVEDAMKLIEAMPFEP-DAIIWGSLLGA 405
++K Y + C ++ + G+ G + A L + + E D + W S++ A
Sbjct: 170 VAVKCGY----GEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISA 222
>gi|413919600|gb|AFW59532.1| hypothetical protein ZEAMMB73_249815 [Zea mays]
Length = 886
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 229/591 (38%), Positives = 350/591 (59%), Gaps = 33/591 (5%)
Query: 41 TVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKN-- 98
++ + + ++DA ++F++M KDVV+ MV GY Q G E+F+ M K+N
Sbjct: 298 NALIDTYAKCGSMNDAVKVFNVMEFKDVVSWNAMVTGYTQSGNFGAAFELFENMRKENIP 357
Query: 99 --VISWTTMISGYVNNNRIDVARKLFEVM----PEKNEVSWTAMLMGYTQCGRIQDAWEL 152
VI+W+ +I+GY A F+ M E N V+ ++L G + E+
Sbjct: 358 LDVITWSAVIAGYAQRGCSQEALDAFQQMILDGSEPNSVTIISLLSACASLGALSQGMEI 417
Query: 153 FKAMPMKSVVAS-----------------NSMILGLGQNGEVQKARVVFDQM--REKDDA 193
A +K + S N++I + + AR +FD + RE++
Sbjct: 418 -HAYSLKKCLLSLDNDFGGDGDGEDLMVYNALIDMYSKCRSFKAARSIFDSIPRRERNVV 476
Query: 194 TWSGMIKVYERKGYELEVIDLFTLM--QKEGVRVNFPSLISVLSVCASLASLDHGRQVHA 251
TW+ MI Y + G + + +F+ M + V N ++ +L CA LA+L G+Q+HA
Sbjct: 477 TWTVMIGGYAQYGDSNDALKIFSEMISKPYAVAPNAYTISCILMACAHLAALRMGKQIHA 536
Query: 252 QLVRC-QFDVDVY-VASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLG 309
+ R +++ VY VA+ LI MY KCG++ + +FD+ ++ V W S++SGY +G G
Sbjct: 537 YVTRHHEYEPSVYFVANCLIDMYSKCGDVDTARNVFDSMPKRNEVSWTSMMSGYGMHGRG 596
Query: 310 EKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYAC 369
+++L +F +M +G +PDD++ + +L ACS++G V +G F+ M+ Y V EHYAC
Sbjct: 597 KEALDIFDKMQKAGFVPDDISFLVLLYACSHSGMVDQGLNYFDIMRRDYDVVASAEHYAC 656
Query: 370 MVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKN 429
++DLL R G+++ A K I+ MP EP A+IW +LL ACR H ++LAE A KL+ ++ +N
Sbjct: 657 VIDLLARCGRLDKAWKTIQEMPMEPSAVIWVALLSACRVHSNVELAEYALNKLVNMKAEN 716
Query: 430 AGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPE 489
G Y L+SNIYA+ R+ DVA +R+ M+K + K PGCSW++ +K F D SHP
Sbjct: 717 DGSYTLISNIYANARRWKDVARIRQLMKKSGIKKRPGCSWVQGKKGTASFFVGD-RSHPL 775
Query: 490 HPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGV 549
P I +LE++ G ++ GY P+++F LHDVD+EEK + L HSEKLA+AYGL+ G
Sbjct: 776 SPEIYSLLERLIGRIKVMGYVPETNFALHDVDDEEKNNLLSEHSEKLALAYGLLTTSPGC 835
Query: 550 PIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
PIR+ KNLRVCGDCHSA ISK++ EII+RD++RFHHFK+G CSC YW
Sbjct: 836 PIRITKNLRVCGDCHSAFTYISKIVDHEIIVRDSSRFHHFKNGSCSCGGYW 886
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 117/422 (27%), Positives = 199/422 (47%), Gaps = 55/422 (13%)
Query: 34 EKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEK---DVVAQTNMVLGYCQDGRVDEGREI 90
E NV ++ + R ++DA +FD + K DV++ ++V + + E+
Sbjct: 181 ESNVFVCNALVAMYSRCGSLEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALEL 240
Query: 91 FDEMPKKNVISWTTMISGYVNNNRIDV--------ARKLFEVMPEKNEVSWTAMLMG--- 139
F EM + ++ N R D+ A + +P+ E+ A+ G
Sbjct: 241 FSEM--------SMIVHEKATNERSDIISIVNILPACASLKALPQIKEIHSYAIRNGTFA 292
Query: 140 -----------YTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMR 188
Y +CG + DA ++F M K VV+ N+M+ G Q+G A +F+ MR
Sbjct: 293 DAFVCNALIDTYAKCGSMNDAVKVFNVMEFKDVVSWNAMVTGYTQSGNFGAAFELFENMR 352
Query: 189 EK----DDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLD 244
++ D TWS +I Y ++G E +D F M +G N ++IS+LS CASL +L
Sbjct: 353 KENIPLDVITWSAVIAGYAQRGCSQEALDAFQQMILDGSEPNSVTIISLLSACASLGALS 412
Query: 245 HGRQVHA-QLVRCQFDV-----------DVYVASVLITMYIKCGELVKGKLIFDNFA--S 290
G ++HA L +C + D+ V + LI MY KC + IFD+
Sbjct: 413 QGMEIHAYSLKKCLLSLDNDFGGDGDGEDLMVYNALIDMYSKCRSFKAARSIFDSIPRRE 472
Query: 291 KDIVMWNSIISGYAQYGLGEKSLKVFHEMFSS--GVMPDDVTLVGVLSACSYTGKVKEGR 348
+++V W +I GYAQYG +LK+F EM S V P+ T+ +L AC++ ++ G+
Sbjct: 473 RNVVTWTVMIGGYAQYGDSNDALKIFSEMISKPYAVAPNAYTISCILMACAHLAALRMGK 532
Query: 349 EIFESMKSKYLVEPKTEHYA-CMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACR 407
+I + + EP A C++D+ + G V+ A + ++MP + + + W S++
Sbjct: 533 QIHAYVTRHHEYEPSVYFVANCLIDMYSKCGDVDTARNVFDSMP-KRNEVSWTSMMSGYG 591
Query: 408 TH 409
H
Sbjct: 592 MH 593
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 94/377 (24%), Positives = 155/377 (41%), Gaps = 79/377 (20%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKN----VVSWTVMLGGFIRDSRIDDA 56
M ++VVSW AMV GY + G A LF M ++N V++W+ ++ G+ + +A
Sbjct: 320 MEFKDVVSWNAMVTGYTQSGNFGAAFELFENMRKENIPLDVITWSAVIAGYAQRGCSQEA 379
Query: 57 RRLFDMM----PEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVIS----------- 101
F M E + V +++ G + +G EI KK ++S
Sbjct: 380 LDAFQQMILDGSEPNSVTIISLLSACASLGALSQGMEIHAYSLKKCLLSLDNDFGGDGDG 439
Query: 102 -----WTTMISGYVNNNRIDVARKLFEVMP--EKNEVSWTAMLMGYTQCGRIQDAWELFK 154
+ +I Y AR +F+ +P E+N V+WT M+ GY Q G DA ++F
Sbjct: 440 EDLMVYNALIDMYSKCRSFKAARSIFDSIPRRERNVVTWTVMIGGYAQYGDSNDALKIFS 499
Query: 155 AMPMKSVV-------------------------------------------ASNSMILGL 171
M K +N +I
Sbjct: 500 EMISKPYAVAPNAYTISCILMACAHLAALRMGKQIHAYVTRHHEYEPSVYFVANCLIDMY 559
Query: 172 GQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLI 231
+ G+V AR VFD M ++++ +W+ M+ Y G E +D+F MQK G + S +
Sbjct: 560 SKCGDVDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFL 619
Query: 232 SVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASV-----LITMYIKCGELVKG-KLIF 285
+L C+ +D G + ++R +DV VAS +I + +CG L K K I
Sbjct: 620 VLLYACSHSGMVDQGLN-YFDIMRRDYDV---VASAEHYACVIDLLARCGRLDKAWKTIQ 675
Query: 286 DNFASKDIVMWNSIISG 302
+ V+W +++S
Sbjct: 676 EMPMEPSAVIWVALLSA 692
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 78/398 (19%), Positives = 162/398 (40%), Gaps = 66/398 (16%)
Query: 72 TNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRID----VARKLFEVMPE 127
T +V Y G + + + + + W ++ ++ +D V+ ++ +
Sbjct: 87 TGVVASYLACGATKDALSVLERVTPSPAVWWNLLVREHIKEGHLDRAIGVSCRMLRAGTK 146
Query: 128 KNEVSWTAMLMGYTQ-----CGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARV 182
+ + L + CGR +V N+++ + G ++ A +
Sbjct: 147 PDHFTLPYALKACGELPSYCCGRALHGLICCNGFE-SNVFVCNALVAMYSRCGSLEDASL 205
Query: 183 VFDQMREK---DDATWSGMIKVYERKGYELEVIDLFTLM------QKEGVRVNFPSLISV 233
VFD++ K D +W+ ++ + + ++LF+ M + R + S++++
Sbjct: 206 VFDEITRKGIDDVISWNSIVAAHVKGSNPRTALELFSEMSMIVHEKATNERSDIISIVNI 265
Query: 234 LSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDI 293
L CASL +L +++H+ +R D +V + LI Y KCG + +F+ KD+
Sbjct: 266 LPACASLKALPQIKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMNDAVKVFNVMEFKDV 325
Query: 294 VMWNS-----------------------------------IISGYAQYGLGEKSLKVFHE 318
V WN+ +I+GYAQ G +++L F +
Sbjct: 326 VSWNAMVTGYTQSGNFGAAFELFENMRKENIPLDVITWSAVIAGYAQRGCSQEALDAFQQ 385
Query: 319 MFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEH-----------Y 367
M G P+ VT++ +LSAC+ G + +G EI K L+ + Y
Sbjct: 386 MILDGSEPNSVTIISLLSACASLGALSQGMEIHAYSLKKCLLSLDNDFGGDGDGEDLMVY 445
Query: 368 ACMVDLLGRAGQVEDAMKLIEAMP-FEPDAIIWGSLLG 404
++D+ + + A + +++P E + + W ++G
Sbjct: 446 NALIDMYSKCRSFKAARSIFDSIPRRERNVVTWTVMIG 483
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/305 (21%), Positives = 123/305 (40%), Gaps = 89/305 (29%)
Query: 9 WTAMVRGYVEEGMITEAGTLFWQMP--EKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEK 66
+ A++ Y + A ++F +P E+NVV+WTVM+GG+ + +DA ++F M K
Sbjct: 445 YNALIDMYSKCRSFKAARSIFDSIPRRERNVVTWTVMIGGYAQYGDSNDALKIFSEMISK 504
Query: 67 DVVAQTN-------------------------------------------MVLGYCQDGR 83
N ++ Y + G
Sbjct: 505 PYAVAPNAYTISCILMACAHLAALRMGKQIHAYVTRHHEYEPSVYFVANCLIDMYSKCGD 564
Query: 84 VDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEK----NEVSWTAMLMG 139
VD R +FD MPK+N +SWT+M+SGY + R A +F+ M + +++S+ +L
Sbjct: 565 VDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLLYA 624
Query: 140 YT------------------------------------QCGRIQDAWELFKAMPMK-SVV 162
+ +CGR+ AW+ + MPM+ S V
Sbjct: 625 CSHSGMVDQGLNYFDIMRRDYDVVASAEHYACVIDLLARCGRLDKAWKTIQEMPMEPSAV 684
Query: 163 ASNSMILGLGQNGEVQKARVVFDQ---MREKDDATWSGMIKVYERKGYELEVIDLFTLMQ 219
+++ + V+ A ++ M+ ++D +++ + +Y +V + LM+
Sbjct: 685 IWVALLSACRVHSNVELAEYALNKLVNMKAENDGSYTLISNIYANARRWKDVARIRQLMK 744
Query: 220 KEGVR 224
K G++
Sbjct: 745 KSGIK 749
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 81/172 (47%), Gaps = 19/172 (11%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVV----SWTVMLGGFIRDSRIDDA 56
MP+RN VSWT+M+ GY G EA +F +M + V S+ V+L +D
Sbjct: 575 MPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLLYACSHSGMVDQG 634
Query: 57 RRLFDMM-PEKDVVAQTNM------VLGYCQDGRVDEGREIFDEMP-KKNVISWTTMISG 108
FD+M + DVVA +L C GR+D+ + EMP + + + W ++S
Sbjct: 635 LNYFDIMRRDYDVVASAEHYACVIDLLARC--GRLDKAWKTIQEMPMEPSAVIWVALLSA 692
Query: 109 YVNNNRIDVA----RKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAM 156
++ +++A KL M +N+ S+T + Y R +D + + M
Sbjct: 693 CRVHSNVELAEYALNKLVN-MKAENDGSYTLISNIYANARRWKDVARIRQLM 743
>gi|326519098|dbj|BAJ96548.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 624
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 214/565 (37%), Positives = 338/565 (59%), Gaps = 16/565 (2%)
Query: 49 RDSRIDDARRLFDMMPEK----DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTT 104
+ ++DAR++ + D +++ YC+ G V E R++FDEM +K+++SWT+
Sbjct: 63 QSKNLEDARKVHAHLASSRFAGDAFLDNSLIHLYCKCGSVLEARKVFDEMRRKDMVSWTS 122
Query: 105 MISGYVNNNRIDVARKLFEVMPE----KNEVSWTAMLMGY-----TQCGRIQDAWELFKA 155
+I+GY N+ + A L M + N ++ ++L + GR A + K
Sbjct: 123 LIAGYAQNDMPEEAIGLLPGMLKGRFKPNGFTFASLLKAAGAHADSGIGRQIHALAV-KC 181
Query: 156 MPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLF 215
+ V ++++ + G + A VFD++ K+ +W+ +I + RKG + F
Sbjct: 182 DWHEDVYVGSALLDMYARCGMMDMATAVFDKLDSKNGVSWNALISGFARKGDGETALMTF 241
Query: 216 TLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKC 275
M + G + SV S A L +L+ G+ VHA +++ + + + + L+ MY K
Sbjct: 242 AEMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHMIKSRQKMTAFAGNTLLDMYAKS 301
Query: 276 GELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVL 335
G ++ + +FD KD+V WN++++ +AQYGLG++++ F EM SG+ + VT + +L
Sbjct: 302 GSMIDARKVFDRVDDKDLVTWNTMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQVTFLCIL 361
Query: 336 SACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPD 395
+ACS+ G VKEG+ FE MK +Y +EP+ +H+ +V LLGRAG + A+ I MP EP
Sbjct: 362 TACSHGGLVKEGKRYFEMMK-EYDLEPEIDHFVTVVALLGRAGLLNFALVFIFKMPIEPT 420
Query: 396 AIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKN 455
A +WG+LL ACR H + + AA + +L+P ++GP +LL NIYAS G++ A +R+
Sbjct: 421 AAVWGALLAACRMHKNAKVGQFAADHVFELDPDDSGPPVLLYNIYASTGQWDAAARVRRI 480
Query: 456 MRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSF 515
M+ V K P CSW+E+E VHMF D +HP I +M +I +R+ GY PD +
Sbjct: 481 MKTTGVKKEPACSWVEMENSVHMFVAND-DTHPRAEEIYKMWGQISKKIRKEGYVPDMDY 539
Query: 516 VLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMG 575
VL VD++E+ +L+YHSEKLA+A+ L+++P G IR+MKN+R+CGDCHSA K ISKV G
Sbjct: 540 VLLRVDDQEREANLQYHSEKLALAFALIEMPAGATIRIMKNIRICGDCHSAFKYISKVFG 599
Query: 576 REIILRDANRFHHFKDGLCSCRDYW 600
REI++RD NRFHHF +G CSC DYW
Sbjct: 600 REIVVRDTNRFHHFSNGSCSCADYW 624
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 124/266 (46%), Gaps = 20/266 (7%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM------PEKNVVSWTVMLGGFIRDSRID 54
M +++VSWT+++ GY + M EA L M P + + G DS I
Sbjct: 112 MRRKDMVSWTSLIAGYAQNDMPEEAIGLLPGMLKGRFKPNGFTFASLLKAAGAHADSGI- 170
Query: 55 DARRLFDMMPE----KDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYV 110
R++ + + +DV + ++ Y + G +D +FD++ KN +SW +ISG+
Sbjct: 171 -GRQIHALAVKCDWHEDVYVGSALLDMYARCGMMDMATAVFDKLDSKNGVSWNALISGFA 229
Query: 111 NNNRIDVARKLFEVMP----EKNEVSWTAMLMGYTQCGRI-QDAW---ELFKAMPMKSVV 162
+ A F M E +++++ + G + Q W + K+ +
Sbjct: 230 RKGDGETALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHMIKSRQKMTAF 289
Query: 163 ASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEG 222
A N+++ ++G + AR VFD++ +KD TW+ M+ + + G E + F M+K G
Sbjct: 290 AGNTLLDMYAKSGSMIDARKVFDRVDDKDLVTWNTMLTAFAQYGLGKEAVSHFEEMRKSG 349
Query: 223 VRVNFPSLISVLSVCASLASLDHGRQ 248
+ +N + + +L+ C+ + G++
Sbjct: 350 IYLNQVTFLCILTACSHGGLVKEGKR 375
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 86/172 (50%), Gaps = 2/172 (1%)
Query: 232 SVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASK 291
+ ++ CA +L+ R+VHA L +F D ++ + LI +Y KCG +++ + +FD K
Sbjct: 56 TFITACAQSKNLEDARKVHAHLASSRFAGDAFLDNSLIHLYCKCGSVLEARKVFDEMRRK 115
Query: 292 DIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIF 351
D+V W S+I+GYAQ + E+++ + M P+ T +L A GR+I
Sbjct: 116 DMVSWTSLIAGYAQNDMPEEAIGLLPGMLKGRFKPNGFTFASLLKAAGAHADSGIGRQI- 174
Query: 352 ESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
++ K + ++D+ R G ++ A + + + + + W +L+
Sbjct: 175 HALAVKCDWHEDVYVGSALLDMYARCGMMDMATAVFDKLD-SKNGVSWNALI 225
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 86/194 (44%), Gaps = 12/194 (6%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVV 69
+A++ Y GM+ A +F ++ KN VSW ++ GF R + A F M
Sbjct: 191 SALLDMYARCGMMDMATAVFDKLDSKNGVSWNALISGFARKGDGETALMTFAEMLRNGFE 250
Query: 70 AQ----TNMVLGYCQDGRVDEGREIFDEMPKK----NVISWTTMISGYVNNNRIDVARKL 121
A +++ + G +++G+ + M K + T++ Y + + ARK+
Sbjct: 251 ATHFTYSSVFSSIARLGALEQGKWVHAHMIKSRQKMTAFAGNTLLDMYAKSGSMIDARKV 310
Query: 122 FEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMIL----GLGQNGEV 177
F+ + +K+ V+W ML + Q G ++A F+ M + + L G V
Sbjct: 311 FDRVDDKDLVTWNTMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQVTFLCILTACSHGGLV 370
Query: 178 QKARVVFDQMREKD 191
++ + F+ M+E D
Sbjct: 371 KEGKRYFEMMKEYD 384
>gi|334185294|ref|NP_187883.2| mitochondrial editing factor 22 [Arabidopsis thaliana]
gi|75274142|sp|Q9LTV8.1|PP224_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g12770
gi|11994419|dbj|BAB02421.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332641723|gb|AEE75244.1| mitochondrial editing factor 22 [Arabidopsis thaliana]
Length = 694
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 222/641 (34%), Positives = 357/641 (55%), Gaps = 53/641 (8%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVV 69
T ++ G IT A +F +P + W ++ G+ R++ DA ++ M V
Sbjct: 57 TKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVS 116
Query: 70 AQTNMV---------LGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARK 120
+ L + Q GR ++F +V +I+ Y R+ AR
Sbjct: 117 PDSFTFPHLLKACSGLSHLQMGRFVHA-QVFRLGFDADVFVQNGLIALYAKCRRLGSART 175
Query: 121 LFE--VMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAM----------PMKSVVASNSMI 168
+FE +PE+ VSWTA++ Y Q G +A E+F M + SV+ + + +
Sbjct: 176 VFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCL 235
Query: 169 LGLGQN-----------------------------GEVQKARVVFDQMREKDDATWSGMI 199
L Q G+V A+++FD+M+ + W+ MI
Sbjct: 236 QDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMI 295
Query: 200 KVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFD 259
Y + GY E ID+F M + VR + S+ S +S CA + SL+ R ++ + R +
Sbjct: 296 SGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYR 355
Query: 260 VDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEM 319
DV+++S LI M+ KCG + +L+FD +D+V+W+++I GY +G +++ ++ M
Sbjct: 356 DDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAM 415
Query: 320 FSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQ 379
GV P+DVT +G+L AC+++G V+EG F M + + + P+ +HYAC++DLLGRAG
Sbjct: 416 ERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRM-ADHKINPQQQHYACVIDLLGRAGH 474
Query: 380 VEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNI 439
++ A ++I+ MP +P +WG+LL AC+ H ++L E AA++L ++P N G Y+ LSN+
Sbjct: 475 LDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNL 534
Query: 440 YASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEK 499
YA+ + VAE+R M+++ + K GCSW+EV ++ F D SHP + I R +E
Sbjct: 535 YAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGD-KSHPRYEEIERQVEW 593
Query: 500 IGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRV 559
I L+E G+ + LHD+++EE +L HSE++A+AYGL+ P+G P+R+ KNLR
Sbjct: 594 IESRLKEGGFVANKDASLHDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRITKNLRA 653
Query: 560 CGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
C +CH+A KLISK++ REI++RD NRFHHFKDG+CSC DYW
Sbjct: 654 CVNCHAATKLISKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 75/165 (45%), Gaps = 12/165 (7%)
Query: 247 RQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQY 306
+Q+HA+L+ ++ + LI G++ + +FD+ I WN+II GY++
Sbjct: 38 KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRN 97
Query: 307 GLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGR----EIFE-SMKSKYLVE 361
+ +L ++ M + V PD T +L ACS ++ GR ++F + V+
Sbjct: 98 NHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQ 157
Query: 362 PKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAII-WGSLLGA 405
++ L + ++ A + E +P I+ W +++ A
Sbjct: 158 NG------LIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSA 196
>gi|357477865|ref|XP_003609218.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510273|gb|AES91415.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1134
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 244/642 (38%), Positives = 362/642 (56%), Gaps = 53/642 (8%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVV 69
A+V Y + I A ++F MP K+ VSW M+ G + R ++A F M +V
Sbjct: 495 NALVNMYGKCTAIDNACSVFQLMPSKDTVSWNSMISGLDHNERFEEAVSCFHTMKRNGMV 554
Query: 70 AQTNMV---LGYCQD-GRVDEGREIFDEMPK----KNVISWTTMISGYVNNNRIDVARKL 121
V L C G + GR+I E K +V +++ Y + I+ +K+
Sbjct: 555 PSNFSVISTLSSCSSLGWLTLGRQIHGEGFKWGLDLDVSVSNALLTLYAETDSINECQKV 614
Query: 122 FEVMPEKNEVSWTAMLMGYTQ------------CGRIQDAW------------------- 150
F MPE ++VSW + + + +Q W
Sbjct: 615 FFQMPEYDQVSWNSFIGALAKYEASVLQALKYFLEMMQAGWRPNRVTFINILAAVSSFSV 674
Query: 151 ----ELFKAMPMKSVVAS-----NSMILGLGQNGEVQKARVVFDQMREK-DDATWSGMIK 200
A+ +K VA N+++ G+ +++ ++F +M E+ D+ +W+ MI
Sbjct: 675 LGLGHQIHALILKYSVADDNAIENALLAFYGKCEQMEDCEIIFSRMSERRDEVSWNSMIS 734
Query: 201 VYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDV 260
Y G + +DL M + G +++ + +VLS CAS+A+L+ G +VHA VR +
Sbjct: 735 GYLHSGILHKAMDLVWPMMQRGQKLDGFTFATVLSACASVATLERGMEVHACAVRACLES 794
Query: 261 DVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMF 320
DV V S L+ MY KCG++ F+ ++I WNS+ISGYA++G G+K+LK+F M
Sbjct: 795 DVVVGSALVDMYAKCGKIDYASRFFELMPVRNIYSWNSMISGYARHGHGQKALKIFTRMK 854
Query: 321 SSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQV 380
G PD VT VGVLSACS+ G V EG + F+SM Y + P+ EH++CMVDLLGRAG V
Sbjct: 855 QHGQSPDHVTFVGVLSACSHVGLVDEGYKHFKSMGEVYGLSPRIEHFSCMVDLLGRAGDV 914
Query: 381 EDAMKLIEAMPFEPDAIIWGSLLGAC--RTHMKLDLAEVAAKKLLQLEPKNAGPYILLSN 438
+ I+ MP +P+ +IW ++LGAC +L + AAK L++LEP+NA Y+LLSN
Sbjct: 915 KKIEDFIKTMPMDPNILIWRTVLGACCRANGRNTELGQRAAKMLIELEPQNAVNYVLLSN 974
Query: 439 IYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLE 498
++A+ G + DV E R MRK V K GCSW+ ++ VH+F D +HPE I L+
Sbjct: 975 MHAAGGNWEDVVEARLAMRKAAVKKDAGCSWVNMKDGVHLFVAGD-QTHPEKEKIYEKLK 1033
Query: 499 KIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLR 558
++ +R+AGY P++ + L+D++ E K L YHSEKLA+A+ L + E +PIR+MKNLR
Sbjct: 1034 ELMNKIRDAGYVPETKYALYDLELENKEELLSYHSEKLAIAFVLTRKSE-LPIRIMKNLR 1092
Query: 559 VCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
VCGDCH+A K ISK++GR+IILRD+NRFHHF G+CSC DYW
Sbjct: 1093 VCGDCHTAFKYISKIVGRQIILRDSNRFHHFGGGMCSCGDYW 1134
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 112/457 (24%), Positives = 205/457 (44%), Gaps = 64/457 (14%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFD------MM 63
++ YV G + A LF +MP+KN+VSW+ ++ G+ ++ D+A LF ++
Sbjct: 179 NTLINIYVRIGNLVSARKLFDEMPQKNLVSWSCLISGYTQNRMPDEACSLFKGVISSGLL 238
Query: 64 PEKDVVAQ----------------------------------TNMVLGYCQD--GRVDEG 87
P V +N+++ D G +D+
Sbjct: 239 PNHFAVGSALRACQQCGSTGIKLGMQIHAFICKLPCVSDMILSNVLMSMYSDCSGSIDDA 298
Query: 88 REIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMP--------EKNEVSWTAMLMG 139
+FDE+ +N ++W ++IS Y A KLF VM NE + +++
Sbjct: 299 HRVFDEIKFRNSVTWNSIISVYCRRGDAVSAFKLFSVMQMEGVELNLRPNEYTLCSLVTA 358
Query: 140 ---YTQCGRI---QDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDA 193
CG + Q + K+ ++ + ++++ G + G + A+++F QM +++
Sbjct: 359 ACSLADCGLVLLEQMLTRIEKSGFLRDLYVGSALVNGFARYGLMDCAKMIFKQMYDRNAV 418
Query: 194 TWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGR----QV 249
T +G++ R+ E +F M K+ V +N SL+ +LS ++L G+ +V
Sbjct: 419 TMNGLMVGLARQHQGEEAAKVFKEM-KDLVEINSESLVVLLSTFTEFSNLKEGKRKGQEV 477
Query: 250 HAQLVRCQF-DVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGL 308
HA L R D + + + L+ MY KC + +F SKD V WNS+ISG
Sbjct: 478 HAYLFRSGLVDARISIGNALVNMYGKCTAIDNACSVFQLMPSKDTVSWNSMISGLDHNER 537
Query: 309 GEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYA 368
E+++ FH M +G++P + +++ LS+CS G + GR+I K+ ++
Sbjct: 538 FEEAVSCFHTMKRNGMVPSNFSVISTLSSCSSLGWLTLGRQI-HGEGFKWGLDLDVSVSN 596
Query: 369 CMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
++ L + + K+ MP E D + W S +GA
Sbjct: 597 ALLTLYAETDSINECQKVFFQMP-EYDQVSWNSFIGA 632
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 102/373 (27%), Positives = 184/373 (49%), Gaps = 31/373 (8%)
Query: 58 RLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDV 117
+L+ DV ++ Y + G + R++FDEMP+KN++SW+ +ISGY N D
Sbjct: 165 QLYKTGFTDDVFFCNTLINIYVRIGNLVSARKLFDEMPQKNLVSWSCLISGYTQNRMPDE 224
Query: 118 ARKLFE------VMPEKNEVSWTAMLMGYTQCGR------IQDAWELFKAMPMKSVVASN 165
A LF+ ++P N + + L QCG +Q + K + ++ SN
Sbjct: 225 ACSLFKGVISSGLLP--NHFAVGSALRACQQCGSTGIKLGMQIHAFICKLPCVSDMILSN 282
Query: 166 SMILGLGQ-NGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVR 224
++ +G + A VFD+++ ++ TW+ +I VY R+G + LF++MQ EGV
Sbjct: 283 VLMSMYSDCSGSIDDAHRVFDEIKFRNSVTWNSIISVYCRRGDAVSAFKLFSVMQMEGVE 342
Query: 225 VNFP----SLISVLSVCASLASLDHG----RQVHAQLVRCQFDVDVYVASVLITMYIKCG 276
+N +L S+++ SLA D G Q+ ++ + F D+YV S L+ + + G
Sbjct: 343 LNLRPNEYTLCSLVTAACSLA--DCGLVLLEQMLTRIEKSGFLRDLYVGSALVNGFARYG 400
Query: 277 ELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLS 336
+ K+IF ++ V N ++ G A+ GE++ KVF EM V + +LV +LS
Sbjct: 401 LMDCAKMIFKQMYDRNAVTMNGLMVGLARQHQGEEAAKVFKEM-KDLVEINSESLVVLLS 459
Query: 337 ACSYTGKVKEGR----EIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPF 392
+ +KEG+ E+ + LV+ + +V++ G+ +++A + + MP
Sbjct: 460 TFTEFSNLKEGKRKGQEVHAYLFRSGLVDARISIGNALVNMYGKCTAIDNACSVFQLMP- 518
Query: 393 EPDAIIWGSLLGA 405
D + W S++
Sbjct: 519 SKDTVSWNSMISG 531
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 103/429 (24%), Positives = 194/429 (45%), Gaps = 28/429 (6%)
Query: 4 RNVVSWTAMVRGYVEEGMITEAGTLFWQM----------PEKNVVSWTVMLGGFIRDSRI 53
RN V+W +++ Y G A LF M P + + V + D +
Sbjct: 308 RNSVTWNSIISVYCRRGDAVSAFKLFSVMQMEGVELNLRPNEYTLCSLVTAACSLADCGL 367
Query: 54 DDARRLFDMMPE----KDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGY 109
++ + + +D+ + +V G+ + G +D + IF +M +N ++ ++ G
Sbjct: 368 VLLEQMLTRIEKSGFLRDLYVGSALVNGFARYGLMDCAKMIFKQMYDRNAVTMNGLMVGL 427
Query: 110 VNNNRIDVARKLFEVMP---EKNEVSWTAMLMGYTQCGRIQDAWE--------LFKAMPM 158
++ + A K+F+ M E N S +L +T+ +++ LF++ +
Sbjct: 428 ARQHQGEEAAKVFKEMKDLVEINSESLVVLLSTFTEFSNLKEGKRKGQEVHAYLFRSGLV 487
Query: 159 KSVVA-SNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTL 217
+ ++ N+++ G+ + A VF M KD +W+ MI + E + F
Sbjct: 488 DARISIGNALVNMYGKCTAIDNACSVFQLMPSKDTVSWNSMISGLDHNERFEEAVSCFHT 547
Query: 218 MQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGE 277
M++ G+ + S+IS LS C+SL L GRQ+H + + D+DV V++ L+T+Y +
Sbjct: 548 MKRNGMVPSNFSVISTLSSCSSLGWLTLGRQIHGEGFKWGLDLDVSVSNALLTLYAETDS 607
Query: 278 LVKGKLIFDNFASKDIVMWNSIISGYAQYGLGE-KSLKVFHEMFSSGVMPDDVTLVGVLS 336
+ + + +F D V WNS I A+Y ++LK F EM +G P+ VT + +L+
Sbjct: 608 INECQKVFFQMPEYDQVSWNSFIGALAKYEASVLQALKYFLEMMQAGWRPNRVTFINILA 667
Query: 337 ACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDA 396
A S + G +I ++ KY V ++ G+ Q+ED + M D
Sbjct: 668 AVSSFSVLGLGHQI-HALILKYSVADDNAIENALLAFYGKCEQMEDCEIIFSRMSERRDE 726
Query: 397 IIWGSLLGA 405
+ W S++
Sbjct: 727 VSWNSMISG 735
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 85/319 (26%), Positives = 147/319 (46%), Gaps = 21/319 (6%)
Query: 151 ELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELE 210
+L+K V N++I + G + AR +FD+M +K+ +WS +I Y + E
Sbjct: 165 QLYKTGFTDDVFFCNTLINIYVRIGNLVSARKLFDEMPQKNLVSWSCLISGYTQNRMPDE 224
Query: 211 VIDLFTLMQKEGVRVNFPSLISVLSVCASLAS--LDHGRQVHAQLVRCQFDVDVYVASVL 268
LF + G+ N ++ S L C S + G Q+HA + + D+ +++VL
Sbjct: 225 ACSLFKGVISSGLLPNHFAVGSALRACQQCGSTGIKLGMQIHAFICKLPCVSDMILSNVL 284
Query: 269 ITMYIKC-GELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGV--- 324
++MY C G + +FD ++ V WNSIIS Y + G + K+F M GV
Sbjct: 285 MSMYSDCSGSIDDAHRVFDEIKFRNSVTWNSIISVYCRRGDAVSAFKLFSVMQMEGVELN 344
Query: 325 -MPDDVTLVG-VLSACSYT--GKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQV 380
P++ TL V +ACS G V + + KS +L + + +V+ R G +
Sbjct: 345 LRPNEYTLCSLVTAACSLADCGLVLLEQMLTRIEKSGFLRDLYVG--SALVNGFARYG-L 401
Query: 381 EDAMKLIEAMPFEPDAIIW-GSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNI 439
D K+I ++ +A+ G ++G R H + A+V + +E + +LLS
Sbjct: 402 MDCAKMIFKQMYDRNAVTMNGLMVGLARQHQGEEAAKVFKEMKDLVEINSESLVVLLST- 460
Query: 440 YASQGRFHDVAELRKNMRK 458
F + + L++ RK
Sbjct: 461 ------FTEFSNLKEGKRK 473
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 85/170 (50%), Gaps = 4/170 (2%)
Query: 241 ASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSII 300
+SL +H QL + F DV+ + LI +Y++ G LV + +FD K++V W+ +I
Sbjct: 154 SSLYDANHLHLQLYKTGFTDDVFFCNTLINIYVRIGNLVSARKLFDEMPQKNLVSWSCLI 213
Query: 301 SGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGK--VKEGREIFESMKSKY 358
SGY Q + +++ +F + SSG++P+ + L AC G +K G +I +
Sbjct: 214 SGYTQNRMPDEACSLFKGVISSGLLPNHFAVGSALRACQQCGSTGIKLGMQIHAFICKLP 273
Query: 359 LVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA-CR 407
V M +G ++DA ++ + + F +++ W S++ CR
Sbjct: 274 CVSDMILSNVLMSMYSDCSGSIDDAHRVFDEIKFR-NSVTWNSIISVYCR 322
>gi|86439692|emb|CAJ19324.1| selenium binding protein [Triticum aestivum]
Length = 624
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 213/564 (37%), Positives = 337/564 (59%), Gaps = 14/564 (2%)
Query: 49 RDSRIDDARRLFDMMPEK----DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTT 104
+ ++DAR++ + D +++ YC+ V + R +FD+M +K+++SWT+
Sbjct: 63 QSKNLEDARKIHAHLGSSRFAGDAFLDNSLIHMYCKCRSVLDARNVFDQMRRKDMVSWTS 122
Query: 105 MISGYVNNN----RIDVARKLFEVMPEKNEVSWTAMLMG---YTQCGRIQDAWEL-FKAM 156
+I+GY N+ I + + + + N ++ ++L Y G + L K
Sbjct: 123 LIAGYAQNDMPVEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYADSGTGRQIHALAVKCG 182
Query: 157 PMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFT 216
+ V ++++ + G++ A VFD++ K+ +W+ +I + RKG + F
Sbjct: 183 WHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGDGESALMTFA 242
Query: 217 LMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCG 276
M + G + SV S A L +L+ G+ VHA +++ + + +V + L+ MY K G
Sbjct: 243 EMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHVIKSRQKLTAFVGNTLLDMYAKSG 302
Query: 277 ELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLS 336
++ + +FD +KD+V WNS+++ +AQYGLG++++ F EM SGV + +T + +L+
Sbjct: 303 SMIDARKVFDRVDNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGVYLNQITFLCILT 362
Query: 337 ACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDA 396
ACS+ G VKEG+ FE MK +Y +EP+ +HY +V LLGRAG + A+ I MP EP A
Sbjct: 363 ACSHGGLVKEGKRYFEMMK-EYDLEPEIDHYVTVVALLGRAGLLNYALVFIFKMPMEPTA 421
Query: 397 IIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNM 456
+WG+LL ACR H + + AA + +L+P ++GP +LL NIYAS G++ A +R M
Sbjct: 422 AVWGALLAACRMHKNAKVGQFAADHVFELDPDDSGPPVLLYNIYASTGQWDAAARVRMMM 481
Query: 457 RKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFV 516
+ V K P CSW+E+E VHMF D +HP+ I +M +I +R+ GY PD +V
Sbjct: 482 KTTGVKKEPACSWVEMENSVHMFVAND-DTHPQAEEIYKMWGEISKKIRKEGYVPDMDYV 540
Query: 517 LHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGR 576
L VD++EK +L+YHSEKLA+A+ L+++P G IR+MKN+R+CGDCHSA K ISKV GR
Sbjct: 541 LLHVDDQEKEANLQYHSEKLALAFALIEMPAGATIRIMKNIRICGDCHSAFKYISKVFGR 600
Query: 577 EIILRDANRFHHFKDGLCSCRDYW 600
EI++RD NRFHHF G CSC DYW
Sbjct: 601 EIVVRDTNRFHHFSSGSCSCGDYW 624
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 130/289 (44%), Gaps = 22/289 (7%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM------PEKNVVSWTVMLGGFIRDSRID 54
M +++VSWT+++ GY + M EA L M P + + G DS
Sbjct: 112 MRRKDMVSWTSLIAGYAQNDMPVEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYADS--G 169
Query: 55 DARRLFDMMPE----KDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYV 110
R++ + + +DV + ++ Y + G++D +FD++ KN +SW +ISG+
Sbjct: 170 TGRQIHALAVKCGWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFA 229
Query: 111 NNNRIDVARKLFEVMP----EKNEVSWTAMLMGYTQCGRI-QDAW---ELFKAMPMKSVV 162
+ A F M E +++++ + G + Q W + K+ +
Sbjct: 230 RKGDGESALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHVIKSRQKLTAF 289
Query: 163 ASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEG 222
N+++ ++G + AR VFD++ KD TW+ M+ + + G E + F M+K G
Sbjct: 290 VGNTLLDMYAKSGSMIDARKVFDRVDNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSG 349
Query: 223 VRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQF--DVDVYVASVLI 269
V +N + + +L+ C+ + G++ + ++D YV V +
Sbjct: 350 VYLNQITFLCILTACSHGGLVKEGKRYFEMMKEYDLEPEIDHYVTVVAL 398
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 84/172 (48%), Gaps = 2/172 (1%)
Query: 232 SVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASK 291
S ++ CA +L+ R++HA L +F D ++ + LI MY KC ++ + +FD K
Sbjct: 56 SFITACAQSKNLEDARKIHAHLGSSRFAGDAFLDNSLIHMYCKCRSVLDARNVFDQMRRK 115
Query: 292 DIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIF 351
D+V W S+I+GYAQ + +++ + M P+ T +L A GR+I
Sbjct: 116 DMVSWTSLIAGYAQNDMPVEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYADSGTGRQI- 174
Query: 352 ESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
++ K + ++D+ R G+++ A + + + + + W +L+
Sbjct: 175 HALAVKCGWHEDVYVGSALLDMYARCGKMDMATAVFDKLD-SKNGVSWNALI 225
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 82/212 (38%), Gaps = 51/212 (24%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM----------PEKNVVSWTVMLGG---- 46
+ +N VSW A++ G+ +G A F +M +V S LG
Sbjct: 213 LDSKNGVSWNALISGFARKGDGESALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQG 272
Query: 47 ----------------FIRDSRID---------DARRLFDMMPEKDVVAQTNMVLGYCQD 81
F+ ++ +D DAR++FD + KD+V +M+ + Q
Sbjct: 273 KWVHAHVIKSRQKLTAFVGNTLLDMYAKSGSMIDARKVFDRVDNKDLVTWNSMLTAFAQY 332
Query: 82 GRVDEGREIFDEMPKK----NVISWTTMISGYVNNNRIDVARKLFEVM------PEKNEV 131
G E F+EM K N I++ +++ + + ++ FE+M PE +
Sbjct: 333 GLGKEAVSHFEEMRKSGVYLNQITFLCILTACSHGGLVKEGKRYFEMMKEYDLEPEIDHY 392
Query: 132 SWTAMLMGYTQCGRIQDAWELFKAMPMKSVVA 163
L+G + G + A MPM+ A
Sbjct: 393 VTVVALLG--RAGLLNYALVFIFKMPMEPTAA 422
>gi|75273443|sp|Q9LIQ7.1|PP252_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g24000, mitochondrial; Flags: Precursor
gi|9294669|dbj|BAB03018.1| unnamed protein product [Arabidopsis thaliana]
Length = 633
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 217/592 (36%), Positives = 345/592 (58%), Gaps = 48/592 (8%)
Query: 48 IRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMIS 107
+ S I RR ++ + +K V + + GR+ I + + +++ T+++
Sbjct: 51 LEGSYIPADRRFYNTLLKKCTVFKLLI------QGRIVHA-HILQSIFRHDIVMGNTLLN 103
Query: 108 GYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAM----------P 157
Y ++ ARK+FE MP+++ V+WT ++ GY+Q R DA F M
Sbjct: 104 MYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFT 163
Query: 158 MKSVVAS----------------------------NSMILGL-GQNGEVQKARVVFDQMR 188
+ SV+ + S +L L + G + A++VFD +
Sbjct: 164 LSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALE 223
Query: 189 EKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQ 248
++D +W+ +I + R+ + ++LF M ++G R + S S+ C+S L+ G+
Sbjct: 224 SRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKW 283
Query: 249 VHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGL 308
VHA +++ + + + L+ MY K G + + IFD A +D+V WNS+++ YAQ+G
Sbjct: 284 VHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGF 343
Query: 309 GEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYA 368
G++++ F EM G+ P++++ + VL+ACS++G + EG +E MK +V P+ HY
Sbjct: 344 GKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIV-PEAWHYV 402
Query: 369 CMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPK 428
+VDLLGRAG + A++ IE MP EP A IW +LL ACR H +L AA+ + +L+P
Sbjct: 403 TVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPD 462
Query: 429 NAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHP 488
+ GP+++L NIYAS GR++D A +RK M++ V K P CSW+E+E +HMF D HP
Sbjct: 463 DPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVAND-ERHP 521
Query: 489 EHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEG 548
+ I R E++ ++E GY PD+S V+ VD++E+ +L+YHSEK+A+A+ L+ P G
Sbjct: 522 QREEIARKWEEVLAKIKELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPG 581
Query: 549 VPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
I + KN+RVCGDCH+AIKL SKV+GREII+RD NRFHHFKDG CSC+DYW
Sbjct: 582 STIHIKKNIRVCGDCHTAIKLASKVVGREIIVRDTNRFHHFKDGNCSCKDYW 633
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 134/289 (46%), Gaps = 47/289 (16%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMM- 63
++V ++ Y + G + EA +F +MP+++ V+WT ++ G+ + R DA F+ M
Sbjct: 94 DIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQML 153
Query: 64 -----PEKDVVAQ---------------------------TNMVLG------YCQDGRVD 85
P + ++ +N+ +G Y + G +D
Sbjct: 154 RFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMD 213
Query: 86 EGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEK----NEVSWTAMLMGYT 141
+ + +FD + +N +SW +I+G+ + + A +LF+ M + S+ ++ +
Sbjct: 214 DAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACS 273
Query: 142 QCGRI-QDAW---ELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSG 197
G + Q W + K+ A N+++ ++G + AR +FD++ ++D +W+
Sbjct: 274 STGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNS 333
Query: 198 MIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHG 246
++ Y + G+ E + F M++ G+R N S +SVL+ C+ LD G
Sbjct: 334 LLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEG 382
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 96/218 (44%), Gaps = 17/218 (7%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV----VSWTVMLGGFIRDSRIDDA 56
+ RN VSW A++ G+ +A LF M S+ + G ++
Sbjct: 222 LESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQG 281
Query: 57 RRLFDMM---PEKDVVAQTNMVLG-YCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+ + M EK V N +L Y + G + + R+IFD + K++V+SW ++++ Y +
Sbjct: 282 KWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQH 341
Query: 113 NRIDVARKLFEVMP----EKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASN--- 165
A FE M NE+S+ ++L + G + + W ++ M +V
Sbjct: 342 GFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHY 401
Query: 166 -SMILGLGQNGEVQKARVVFDQMR-EKDDATWSGMIKV 201
+++ LG+ G++ +A ++M E A W ++
Sbjct: 402 VTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNA 439
>gi|359483655|ref|XP_003632994.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Vitis vinifera]
Length = 613
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 218/535 (40%), Positives = 326/535 (60%), Gaps = 13/535 (2%)
Query: 75 VLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMP----EKNE 130
+L +C + +IF ++ N+ +W TMI GY + A +L+ M E +
Sbjct: 83 LLSFCSP--MSYAHQIFSQIQNPNIFTWNTMIRGYAESENPMPALELYRQMHVSCIEPDT 140
Query: 131 VSWTAMLMGYTQCGRIQDAWELFKAMPMKS-----VVASNSMILGLGQNGEVQKARVVFD 185
++ +L + +++ E ++ +++ V N+++ G + A +F+
Sbjct: 141 HTYPFLLKAIAKLMDVREG-EKVHSIAIRNGFESLVFVQNTLVHMYAACGHAESAHKLFE 199
Query: 186 QMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDH 245
M E++ TW+ +I Y G E + LF M GV + +++S+LS CA L +L
Sbjct: 200 LMAERNLVTWNSVINGYALNGRPNEALTLFREMGLRGVEPDGFTMVSLLSACAELGALAL 259
Query: 246 GRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQ 305
GR+ H +V+ D +++ + L+ +Y KCG + + +FD K +V W S+I G A
Sbjct: 260 GRRAHVYMVKVGLDGNLHAGNALLDLYAKCGSIRQAHKVFDEMEEKSVVSWTSLIVGLAV 319
Query: 306 YGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTE 365
G G+++L++F E+ G+MP ++T VGVL ACS+ G V EG + F+ MK +Y + PK E
Sbjct: 320 NGFGKEALELFKELERKGLMPSEITFVGVLYACSHCGMVDEGFDYFKRMKEEYGIVPKIE 379
Query: 366 HYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQL 425
HY CMVDLLGRAG V+ A + I+ MP +P+A++W +LLGAC H L L EVA +LLQL
Sbjct: 380 HYGCMVDLLGRAGLVKQAHEFIQNMPMQPNAVVWRTLLGACTIHGHLALGEVARAQLLQL 439
Query: 426 EPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCV 485
EPK++G Y+LLSN+YAS+ R+ DV ++R+ M + V K PG S +E+ ++H F D
Sbjct: 440 EPKHSGDYVLLSNLYASEQRWSDVHKVRRTMLREGVKKTPGHSLVELRNRLHEFVMGD-R 498
Query: 486 SHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKL 545
SHP+ I L +I LL+ GY P S VL D++EEEK +L YHSEK+A+A+ L+
Sbjct: 499 SHPQTEEIYVKLAEITKLLKLEGYVPHISNVLADIEEEEKETALSYHSEKIAIAFMLINT 558
Query: 546 PEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
G+PIRV+KNLRVC DCH AIKLISKV REI++RD +RFHHFKDG CSC+DYW
Sbjct: 559 AAGIPIRVVKNLRVCADCHLAIKLISKVFDREIVVRDRSRFHHFKDGHCSCKDYW 613
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 121/259 (46%), Gaps = 18/259 (6%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQMP----EKNVVSWTVMLGGFIRDSRIDDARRLF 60
N+ +W M+RGY E A L+ QM E + ++ +L + + + ++
Sbjct: 104 NIFTWNTMIRGYAESENPMPALELYRQMHVSCIEPDTHTYPFLLKAIAKLMDVREGEKVH 163
Query: 61 DMMP----EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRID 116
+ E V Q +V Y G + ++F+ M ++N+++W ++I+GY N R +
Sbjct: 164 SIAIRNGFESLVFVQNTLVHMYAACGHAESAHKLFELMAERNLVTWNSVINGYALNGRPN 223
Query: 117 VARKLFEVMP----EKNEVSWTAML-----MGYTQCGRIQDAWELFKAMPMKSVVASNSM 167
A LF M E + + ++L +G GR + + K ++ A N++
Sbjct: 224 EALTLFREMGLRGVEPDGFTMVSLLSACAELGALALGRRAHVY-MVKVGLDGNLHAGNAL 282
Query: 168 ILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNF 227
+ + G +++A VFD+M EK +W+ +I G+ E ++LF ++++G+ +
Sbjct: 283 LDLYAKCGSIRQAHKVFDEMEEKSVVSWTSLIVGLAVNGFGKEALELFKELERKGLMPSE 342
Query: 228 PSLISVLSVCASLASLDHG 246
+ + VL C+ +D G
Sbjct: 343 ITFVGVLYACSHCGMVDEG 361
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 103/217 (47%), Gaps = 18/217 (8%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV----VSWTVMLGGFIRDSRIDDA 56
M ERN+V+W +++ GY G EA TLF +M + V + +L +
Sbjct: 201 MAERNLVTWNSVINGYALNGRPNEALTLFREMGLRGVEPDGFTMVSLLSACAELGALALG 260
Query: 57 RRLFDMMP----EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
RR M + ++ A ++ Y + G + + ++FDEM +K+V+SWT++I G N
Sbjct: 261 RRAHVYMVKVGLDGNLHAGNALLDLYAKCGSIRQAHKVFDEMEEKSVVSWTSLIVGLAVN 320
Query: 113 NRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAMP-----MKSVVA 163
A +LF+ + K +E+++ +L + CG + + ++ FK M + +
Sbjct: 321 GFGKEALELFKELERKGLMPSEITFVGVLYACSHCGMVDEGFDYFKRMKEEYGIVPKIEH 380
Query: 164 SNSMILGLGQNGEVQKARVVFDQMREKDDA-TWSGMI 199
M+ LG+ G V++A M + +A W ++
Sbjct: 381 YGCMVDLLGRAGLVKQAHEFIQNMPMQPNAVVWRTLL 417
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 81/180 (45%), Gaps = 12/180 (6%)
Query: 231 ISVLSVCASLASLDHGRQVHAQLVR-----CQFDVDVYVASVLITMYIKCGELVKGKLIF 285
I++L CAS S RQ+HA +R D+ Y+ L++ C + IF
Sbjct: 43 IALLLSCAS--SKFKFRQIHAFSIRHGVPLTNPDMGKYLIFTLLSF---CSPMSYAHQIF 97
Query: 286 DNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVK 345
+ +I WN++I GYA+ +L+++ +M S + PD T +L A + V+
Sbjct: 98 SQIQNPNIFTWNTMIRGYAESENPMPALELYRQMHVSCIEPDTHTYPFLLKAIAKLMDVR 157
Query: 346 EGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
EG ++ S+ + E +V + G E A KL E M E + + W S++
Sbjct: 158 EGEKV-HSIAIRNGFESLVFVQNTLVHMYAACGHAESAHKLFELMA-ERNLVTWNSVING 215
>gi|449463631|ref|XP_004149535.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 741
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 194/482 (40%), Positives = 322/482 (66%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
+P NVVSW M+ G+ G +TEA LF +MP KN+VSW M+G ++R+++IDDA +LF
Sbjct: 228 IPTPNVVSWVTMLSGFAHYGRMTEARNLFNEMPTKNLVSWNAMIGAYVRENQIDDAYKLF 287
Query: 61 DMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARK 120
MPEKD V+ T M+ GY + G++ + REI + MP KN+ + T MI+GY+ + R+D A +
Sbjct: 288 MEMPEKDSVSWTAMINGYVRVGKLLQAREILNLMPYKNIAAQTAMINGYLQSGRMDEANE 347
Query: 121 LFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKA 180
+F + ++ V W +M+ GY CGR +A LF+ M K +V+ N+MI Q G++ KA
Sbjct: 348 IFSQISVRDSVCWNSMITGYAHCGRTDEALRLFQEMVCKDMVSWNTMIAAYAQAGQMDKA 407
Query: 181 RVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASL 240
+F++M+E++ +W+ +I Y + G E ++ F LM+++G + + +++ L A+L
Sbjct: 408 LEMFNEMQERNVVSWNSLITGYVQNGLYFEALNCFILMKQQGEKPDQTTIVCCLRASANL 467
Query: 241 ASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSII 300
A+L+ G Q+H ++ F D++V + ++TMY K G + + + +F +KD+V WNS+I
Sbjct: 468 AALNVGVQLHHLTIKTGFGNDLFVKNAILTMYAKSGRVPEAENVFAEIKNKDVVSWNSLI 527
Query: 301 SGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLV 360
+GYA G G++++++F M G++PD+VT G+LSAC++ G V +G +F+SM Y +
Sbjct: 528 AGYALNGCGKEAVELFEVMPLRGIIPDEVTFTGLLSACNHGGFVDQGLNLFKSMTETYSI 587
Query: 361 EPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAK 420
+P++EHYAC+++LLGR G++E+A+++++ M A IWG+LL ACR H L+LA+ +A+
Sbjct: 588 KPQSEHYACVINLLGRVGRLEEAVEIVQGMKTVSSAKIWGALLWACRIHHNLELAKYSAE 647
Query: 421 KLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFT 480
+LL LEP+NA Y+LLSN++A GR+ V +R M++ K PGCSWIE++ ++H F
Sbjct: 648 RLLALEPQNASNYVLLSNMHAEAGRWDMVERVRVLMKENKAEKQPGCSWIEIDNQLHCFL 707
Query: 481 GR 482
+
Sbjct: 708 SK 709
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 115/393 (29%), Positives = 205/393 (52%), Gaps = 46/393 (11%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
M ERN+V++ +M+ Y + G I A LF MP++N+VSW M+ G++ + ++DA RLF
Sbjct: 41 MTERNIVTYNSMISAYAKNGRIANARELFDLMPQRNLVSWNSMIAGYLHNELVEDAARLF 100
Query: 61 DMMPEKDVVAQTNMVLGYCQDGRVDEGRE------------------------------- 89
D M ++D+ + T M+ Y + G +++ RE
Sbjct: 101 DRMFKRDIYSWTLMITCYTRIGELEKARELFNLLPDKQDTVCRNALIAGYAKKRLFREAK 160
Query: 90 -IFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQD 148
+FDEM KNV+SW +++SGY N ++ + + FE M E+N VSW M+ GY G +
Sbjct: 161 KLFDEMLVKNVVSWNSILSGYTKNGKMQLGLQFFEAMGERNVVSWNLMVDGYVGVGDLDS 220
Query: 149 AWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYE 208
AW FK +P +VV+ +M+ G G + +AR +F++M K+ +W+ MI Y R+
Sbjct: 221 AWMFFKKIPTPNVVSWVTMLSGFAHYGRMTEARNLFNEMPTKNLVSWNAMIGAYVRENQI 280
Query: 209 LEVIDLFTLM-QKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASV 267
+ LF M +K+ V S ++++ + L R++ + ++ +
Sbjct: 281 DDAYKLFMEMPEKDSV-----SWTAMINGYVRVGKLLQAREI----LNLMPYKNIAAQTA 331
Query: 268 LITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPD 327
+I Y++ G + + IF + +D V WNS+I+GYA G +++L++F EM V D
Sbjct: 332 MINGYLQSGRMDEANEIFSQISVRDSVCWNSMITGYAHCGRTDEALRLFQEM----VCKD 387
Query: 328 DVTLVGVLSACSYTGKVKEGREIFESMKSKYLV 360
V+ +++A + G++ + E+F M+ + +V
Sbjct: 388 MVSWNTMIAAYAQAGQMDKALEMFNEMQERNVV 420
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 99/415 (23%), Positives = 206/415 (49%), Gaps = 22/415 (5%)
Query: 49 RDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISG 108
R RI++A +F M E+++V +M+ Y ++GR+ RE+FD MP++N++SW +MI+G
Sbjct: 27 RSGRIEEAVAVFLQMTERNIVTYNSMISAYAKNGRIANARELFDLMPQRNLVSWNSMIAG 86
Query: 109 YVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKS-VVASNSM 167
Y++N ++ A +LF+ M +++ SWT M+ YT+ G ++ A ELF +P K V N++
Sbjct: 87 YLHNELVEDAARLFDRMFKRDIYSWTLMITCYTRIGELEKARELFNLLPDKQDTVCRNAL 146
Query: 168 ILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNF 227
I G + ++A+ +FD+M K+ +W+ ++ Y + G + F M + N
Sbjct: 147 IAGYAKKRLFREAKKLFDEMLVKNVVSWNSILSGYTKNGKMQLGLQFFEAMGER----NV 202
Query: 228 PSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDN 287
S ++ + LD ++ +V +++ + G + + + +F+
Sbjct: 203 VSWNLMVDGYVGVGDLDSAWMFFKKIP----TPNVVSWVTMLSGFAHYGRMTEARNLFNE 258
Query: 288 FASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEG 347
+K++V WN++I Y + + + K+F EM D V+ +++ GK+ +
Sbjct: 259 MPTKNLVSWNAMIGAYVRENQIDDAYKLFMEMPEK----DSVSWTAMINGYVRVGKLLQA 314
Query: 348 REIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACR 407
REI M K + M++ ++G++++A ++ + D++ W S++
Sbjct: 315 REILNLMPYKNIAAQ-----TAMINGYLQSGRMDEANEIFSQISVR-DSVCWNSMITG-- 366
Query: 408 THMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVI 462
+ + A + ++ K+ + + YA G+ E+ M++RNV+
Sbjct: 367 -YAHCGRTDEALRLFQEMVCKDMVSWNTMIAAYAQAGQMDKALEMFNEMQERNVV 420
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 103/365 (28%), Positives = 178/365 (48%), Gaps = 22/365 (6%)
Query: 99 VISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPM 158
V + IS + RI+ A +F M E+N V++ +M+ Y + GRI +A ELF MP
Sbjct: 15 VFTQNLRISQLGRSGRIEEAVAVFLQMTERNIVTYNSMISAYAKNGRIANARELFDLMPQ 74
Query: 159 KSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLM 218
+++V+ NSMI G N V+ A +FD+M ++D +W+ MI Y R G + +LF L+
Sbjct: 75 RNLVSWNSMIAGYLHNELVEDAARLFDRMFKRDIYSWTLMITCYTRIGELEKARELFNLL 134
Query: 219 QKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGEL 278
+ V +LI A A R+ +L +V + +++ Y K G++
Sbjct: 135 PDKQDTVCRNALI------AGYAKKRLFREAK-KLFDEMLVKNVVSWNSILSGYTKNGKM 187
Query: 279 VKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSAC 338
G F+ +++V WN ++ GY G + + F ++ + P+ V+ V +LS
Sbjct: 188 QLGLQFFEAMGERNVVSWNLMVDGYVGVGDLDSAWMFFKKIPT----PNVVSWVTMLSGF 243
Query: 339 SYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAII 398
++ G++ E R +F M +K LV + M+ R Q++DA KL MP E D++
Sbjct: 244 AHYGRMTEARNLFNEMPTKNLVS-----WNAMIGAYVRENQIDDAYKLFMEMP-EKDSVS 297
Query: 399 WGSLLGACRTHMKLDLAEVAAKKLLQLEP-KNAGPYILLSNIYASQGRFHDVAELRKNMR 457
W +++ KL + A+++L L P KN + N Y GR + E+ +
Sbjct: 298 WTAMINGYVRVGKL----LQAREILNLMPYKNIAAQTAMINGYLQSGRMDEANEIFSQIS 353
Query: 458 KRNVI 462
R+ +
Sbjct: 354 VRDSV 358
>gi|242087005|ref|XP_002439335.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
gi|241944620|gb|EES17765.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
Length = 886
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 229/590 (38%), Positives = 351/590 (59%), Gaps = 31/590 (5%)
Query: 41 TVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKN-- 98
++ + + + DA +F++M KDVV+ MV GY Q G+ E+F M K+N
Sbjct: 298 NALIDTYAKCGSMKDAVNVFNVMEFKDVVSWNAMVTGYTQSGKFGAAFELFKNMRKENIP 357
Query: 99 --VISWTTMISGYVNNNRIDVARKLFEVM----PEKNEVSWTAMLMGYTQCGRIQD---- 148
VI+W+ +I+GY A F+ M E N V+ ++L G +
Sbjct: 358 LDVITWSAVIAGYAQRGYGQEALDTFQQMILYGSEPNSVTIISLLSACASLGALSQGMET 417
Query: 149 -AWELFKAM-----------PMKSVVASNSMILGLGQNGEVQKARVVFDQM--REKDDAT 194
A+ L K + + +V N++I + + AR +F+ + RE++ T
Sbjct: 418 HAYSLKKCLLSLDNDFGGDGDGEDLVVHNALIDMYSKCRSFKAARTIFNSIPRRERNVVT 477
Query: 195 WSGMIKVYERKGYELEVIDLFTLM--QKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQ 252
W+ MI Y + G + + LF+ M + V N ++ +L CA L+SL G+Q+HA
Sbjct: 478 WTVMIGGYAQYGDSNDALKLFSEMISKPYAVAPNAYTISCILMACAHLSSLRMGKQIHAY 537
Query: 253 LVRC-QFDVDVY-VASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGE 310
+ R +++ VY VA+ LI MY KCG++ + +FD+ ++ V W S++SGY +G G+
Sbjct: 538 VTRHHEYESSVYFVANCLIDMYSKCGDVDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGK 597
Query: 311 KSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACM 370
++L +F +M +G +PDD++ + +L ACS++G V +G + F+ M+S Y V +HYAC+
Sbjct: 598 EALDIFDKMQKAGFVPDDISFLVLLYACSHSGMVDQGLDYFDIMRSDYGVIASAQHYACV 657
Query: 371 VDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNA 430
+DLL R+G+++ A K I+ MP EP A IW +LL ACR H ++LAE A KL+ ++ +N
Sbjct: 658 IDLLARSGRLDKAWKTIQEMPMEPSAAIWVALLSACRVHSNVELAEYALNKLVSMKAEND 717
Query: 431 GPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEH 490
G Y L+SNIYA+ R+ DVA +R+ M+K + K PGCSW++ +K F D SHP
Sbjct: 718 GSYTLISNIYATARRWKDVARIRQLMKKSGIKKRPGCSWVQGKKGTASFFVGD-RSHPLS 776
Query: 491 PMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVP 550
P I +LE++ G ++ GY P+++F LHDVD+EEK + L HSEKLA+AYGL+ G P
Sbjct: 777 PEIYSLLERLIGRIKVMGYVPETNFALHDVDDEEKNNLLTEHSEKLALAYGLLTTSPGCP 836
Query: 551 IRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
IR+ KNLRVCGDCHSA ISK++ EII+RD++RFHHFK+G CSC YW
Sbjct: 837 IRITKNLRVCGDCHSAFIYISKIVDHEIIVRDSSRFHHFKNGSCSCGGYW 886
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 126/481 (26%), Positives = 216/481 (44%), Gaps = 78/481 (16%)
Query: 6 VVSWTAMVRGYVEEGMITEAGTLFWQM------PEKNVVSWTVMLGGFIRDSRIDDARRL 59
V W +VR ++EEG + A + +M P+ + + + G + R A
Sbjct: 114 AVWWNLLVRAHIEEGRLDRAIGVSCRMLRAGTKPDHFTLPYALKACGELPSYRSGSAFHG 173
Query: 60 FDMMP--EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKK---NVISWTTMISGYVNNNR 114
E +V +V Y + G +++ +FDE+ +K +VISW ++++ +V +
Sbjct: 174 LICCNGFESNVFVCNALVAMYSRSGSLEDASLVFDEITRKGIDDVISWNSIVAAHVKGSN 233
Query: 115 IDVARKLF-------------------------------EVMPEKNEVSWTAMLMG---- 139
A LF + +P+ E+ A+ G
Sbjct: 234 PRTALDLFSEMTTIVHEKATNERSDIISIVNILPACASLKALPQTKEIHSYAIRNGTFAD 293
Query: 140 ----------YTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMRE 189
Y +CG ++DA +F M K VV+ N+M+ G Q+G+ A +F MR+
Sbjct: 294 AFVCNALIDTYAKCGSMKDAVNVFNVMEFKDVVSWNAMVTGYTQSGKFGAAFELFKNMRK 353
Query: 190 K----DDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDH 245
+ D TWS +I Y ++GY E +D F M G N ++IS+LS CASL +L
Sbjct: 354 ENIPLDVITWSAVIAGYAQRGYGQEALDTFQQMILYGSEPNSVTIISLLSACASLGALSQ 413
Query: 246 GRQVHA-QLVRCQFDV-----------DVYVASVLITMYIKCGELVKGKLIFDNFA--SK 291
G + HA L +C + D+ V + LI MY KC + IF++ +
Sbjct: 414 GMETHAYSLKKCLLSLDNDFGGDGDGEDLVVHNALIDMYSKCRSFKAARTIFNSIPRRER 473
Query: 292 DIVMWNSIISGYAQYGLGEKSLKVFHEMFSS--GVMPDDVTLVGVLSACSYTGKVKEGRE 349
++V W +I GYAQYG +LK+F EM S V P+ T+ +L AC++ ++ G++
Sbjct: 474 NVVTWTVMIGGYAQYGDSNDALKLFSEMISKPYAVAPNAYTISCILMACAHLSSLRMGKQ 533
Query: 350 IFESMKSKYLVEPKTEHYA-CMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRT 408
I + + E A C++D+ + G V+ A + ++MP + + + W S++
Sbjct: 534 IHAYVTRHHEYESSVYFVANCLIDMYSKCGDVDTARNVFDSMP-KRNEVSWTSMMSGYGM 592
Query: 409 H 409
H
Sbjct: 593 H 593
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 79/400 (19%), Positives = 165/400 (41%), Gaps = 70/400 (17%)
Query: 72 TNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRID----VARKLFEVMPE 127
T +V Y G + + + + + W ++ ++ R+D V+ ++ +
Sbjct: 87 TGVVASYLACGATSDALSVLERVVPSPAVWWNLLVRAHIEEGRLDRAIGVSCRMLRAGTK 146
Query: 128 KNEVSWTAMLMGYTQCGRIQD--AWELFKAMPM-----KSVVASNSMILGLGQNGEVQKA 180
+ + L CG + + F + +V N+++ ++G ++ A
Sbjct: 147 PDHFTLPYALKA---CGELPSYRSGSAFHGLICCNGFESNVFVCNALVAMYSRSGSLEDA 203
Query: 181 RVVFDQMREK---DDATWSGMIKVYERKGYELEVIDLFTLM------QKEGVRVNFPSLI 231
+VFD++ K D +W+ ++ + + +DLF+ M + R + S++
Sbjct: 204 SLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALDLFSEMTTIVHEKATNERSDIISIV 263
Query: 232 SVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASK 291
++L CASL +L +++H+ +R D +V + LI Y KCG + +F+ K
Sbjct: 264 NILPACASLKALPQTKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMKDAVNVFNVMEFK 323
Query: 292 DIVMWNS-----------------------------------IISGYAQYGLGEKSLKVF 316
D+V WN+ +I+GYAQ G G+++L F
Sbjct: 324 DVVSWNAMVTGYTQSGKFGAAFELFKNMRKENIPLDVITWSAVIAGYAQRGYGQEALDTF 383
Query: 317 HEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEH---------- 366
+M G P+ VT++ +LSAC+ G + +G E K L+ +
Sbjct: 384 QQMILYGSEPNSVTIISLLSACASLGALSQGMETHAYSLKKCLLSLDNDFGGDGDGEDLV 443
Query: 367 -YACMVDLLGRAGQVEDAMKLIEAMP-FEPDAIIWGSLLG 404
+ ++D+ + + A + ++P E + + W ++G
Sbjct: 444 VHNALIDMYSKCRSFKAARTIFNSIPRRERNVVTWTVMIG 483
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 124/315 (39%), Gaps = 69/315 (21%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKN----VVSWTVMLGGFIRDSRIDDA 56
M ++VVSW AMV GY + G A LF M ++N V++W+ ++ G+ + +A
Sbjct: 320 MEFKDVVSWNAMVTGYTQSGKFGAAFELFKNMRKENIPLDVITWSAVIAGYAQRGYGQEA 379
Query: 57 RRLFDMM----PEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISW---------- 102
F M E + V +++ G + +G E KK ++S
Sbjct: 380 LDTFQQMILYGSEPNSVTIISLLSACASLGALSQGMETHAYSLKKCLLSLDNDFGGDGDG 439
Query: 103 ------TTMISGYVNNNRIDVARKLFEVMP--EKNEVSWTAMLMGYTQCGRIQDAWELFK 154
+I Y AR +F +P E+N V+WT M+ GY Q G DA +LF
Sbjct: 440 EDLVVHNALIDMYSKCRSFKAARTIFNSIPRRERNVVTWTVMIGGYAQYGDSNDALKLFS 499
Query: 155 AMPMKSVV-------------------------------------------ASNSMILGL 171
M K +N +I
Sbjct: 500 EMISKPYAVAPNAYTISCILMACAHLSSLRMGKQIHAYVTRHHEYESSVYFVANCLIDMY 559
Query: 172 GQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLI 231
+ G+V AR VFD M ++++ +W+ M+ Y G E +D+F MQK G + S +
Sbjct: 560 SKCGDVDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFL 619
Query: 232 SVLSVCASLASLDHG 246
+L C+ +D G
Sbjct: 620 VLLYACSHSGMVDQG 634
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 116/278 (41%), Gaps = 56/278 (20%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQM--------PEKNVVSWTVMLGGFIRDSR-- 52
ERNVV+WT M+ GY + G +A LF +M P +S +M + R
Sbjct: 472 ERNVVTWTVMIGGYAQYGDSNDALKLFSEMISKPYAVAPNAYTISCILMACAHLSSLRMG 531
Query: 53 ---------------------------------IDDARRLFDMMPEKDVVAQTNMVLGYC 79
+D AR +FD MP+++ V+ T+M+ GY
Sbjct: 532 KQIHAYVTRHHEYESSVYFVANCLIDMYSKCGDVDTARNVFDSMPKRNEVSWTSMMSGYG 591
Query: 80 QDGRVDEGREIFDEMPKKNV----ISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTA 135
GR E +IFD+M K IS+ ++ ++ +D F++M V +A
Sbjct: 592 MHGRGKEALDIFDKMQKAGFVPDDISFLVLLYACSHSGMVDQGLDYFDIMRSDYGVIASA 651
Query: 136 MLMG-----YTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQ-NGEVQKARVVFDQ--- 186
+ GR+ AW+ + MPM+ A +L + + V+ A ++
Sbjct: 652 QHYACVIDLLARSGRLDKAWKTIQEMPMEPSAAIWVALLSACRVHSNVELAEYALNKLVS 711
Query: 187 MREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVR 224
M+ ++D +++ + +Y +V + LM+K G++
Sbjct: 712 MKAENDGSYTLISNIYATARRWKDVARIRQLMKKSGIK 749
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 104/251 (41%), Gaps = 55/251 (21%)
Query: 6 VVSWTAMVRGYVEEGMITEAGTLFWQMP--EKNVVSWTVMLGGFIRDSRIDDARRLFDMM 63
+V A++ Y + A T+F +P E+NVV+WTVM+GG+ + +DA +LF M
Sbjct: 442 LVVHNALIDMYSKCRSFKAARTIFNSIPRRERNVVTWTVMIGGYAQYGDSNDALKLFSEM 501
Query: 64 PEKDVVAQTN-------------------------------------------MVLGYCQ 80
K N ++ Y +
Sbjct: 502 ISKPYAVAPNAYTISCILMACAHLSSLRMGKQIHAYVTRHHEYESSVYFVANCLIDMYSK 561
Query: 81 DGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEK----NEVSWTAM 136
G VD R +FD MPK+N +SWT+M+SGY + R A +F+ M + +++S+ +
Sbjct: 562 CGDVDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVL 621
Query: 137 LMGYTQCGRIQDAWELFKAMPMK-SVVASNS----MILGLGQNGEVQKARVVFDQM-REK 190
L + G + + F M V+AS +I L ++G + KA +M E
Sbjct: 622 LYACSHSGMVDQGLDYFDIMRSDYGVIASAQHYACVIDLLARSGRLDKAWKTIQEMPMEP 681
Query: 191 DDATWSGMIKV 201
A W ++
Sbjct: 682 SAAIWVALLSA 692
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 77/169 (45%), Gaps = 13/169 (7%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVV----SWTVMLGGFIRDSRIDDA 56
MP+RN VSWT+M+ GY G EA +F +M + V S+ V+L +D
Sbjct: 575 MPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLLYACSHSGMVDQG 634
Query: 57 RRLFDMM-PEKDVVAQTN----MVLGYCQDGRVDEGREIFDEMP-KKNVISWTTMISGYV 110
FD+M + V+A ++ + GR+D+ + EMP + + W ++S
Sbjct: 635 LDYFDIMRSDYGVIASAQHYACVIDLLARSGRLDKAWKTIQEMPMEPSAAIWVALLSACR 694
Query: 111 NNNRIDVARKLFE---VMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAM 156
++ +++A M +N+ S+T + Y R +D + + M
Sbjct: 695 VHSNVELAEYALNKLVSMKAENDGSYTLISNIYATARRWKDVARIRQLM 743
>gi|115457318|ref|NP_001052259.1| Os04g0218100 [Oryza sativa Japonica Group]
gi|113563830|dbj|BAF14173.1| Os04g0218100, partial [Oryza sativa Japonica Group]
Length = 890
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 241/705 (34%), Positives = 377/705 (53%), Gaps = 108/705 (15%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEK---NVVSWTVMLGGFIRDSRIDDARRL 59
E NV A+V Y G + EA +F ++ ++ +V+SW ++ ++ S A L
Sbjct: 187 ESNVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDL 246
Query: 60 FDMM-------------------------------PEK--------------DVVAQTNM 74
F M P+ DV +
Sbjct: 247 FSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNAL 306
Query: 75 VLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKN----E 130
+ Y + G ++ ++F+ M K+V+SW M++GY + + A +LF+ M ++N
Sbjct: 307 IDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDV 366
Query: 131 VSWTAMLMGYTQCGRIQDAWELFKAM----------PMKSVVASNSMILGLGQNGEV--- 177
V+WTA++ GY+Q G +A LF+ M + SV+++ + + Q E+
Sbjct: 367 VTWTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAY 426
Query: 178 ------------------------------------QKARVVFDQ--MREKDDATWSGMI 199
+ AR +FD + E++ TW+ MI
Sbjct: 427 SLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMI 486
Query: 200 KVYERKGYELEVIDLFTLMQKE--GVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRC- 256
+ + G + + LF M E GV N ++ +L CA LA++ G+Q+HA ++R
Sbjct: 487 GGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHH 546
Query: 257 QFDVDVY-VASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKV 315
+++ Y VA+ LI MY KCG++ + +FD+ + K + W S+++GY +G G ++L +
Sbjct: 547 RYESSAYFVANCLIDMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDI 606
Query: 316 FHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLG 375
F +M +G +PDD+T + VL ACS+ G V +G F+SM + Y + P+ EHYAC +DLL
Sbjct: 607 FDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYACAIDLLA 666
Query: 376 RAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYIL 435
R+G+++ A + ++ MP EP A++W +LL ACR H ++LAE A KL+++ +N G Y L
Sbjct: 667 RSGRLDKAWRTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSYTL 726
Query: 436 LSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMR 495
+SNIYA+ GR+ DVA +R M+K + K PGCSW++ +K F D SHP P I
Sbjct: 727 ISNIYATAGRWKDVARIRHLMKKSGIKKRPGCSWVQGQKGTASFFVGD-RSHPLSPQIYA 785
Query: 496 MLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMK 555
+LE + ++ GY P+++F LHDVDEEEK + L HSEKLA+AYGL+ G PIR+ K
Sbjct: 786 LLESLIDRIKAMGYVPETNFALHDVDEEEKNNLLVEHSEKLALAYGLLTTSPGCPIRITK 845
Query: 556 NLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
NLRVCGDCHSA ISK++ EI++RD +RFHHFK+G CSC YW
Sbjct: 846 NLRVCGDCHSAFTYISKIVDHEIVVRDPSRFHHFKNGSCSCGGYW 890
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 88/428 (20%), Positives = 178/428 (41%), Gaps = 73/428 (17%)
Query: 72 TNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRID----VARKLFEVMPE 127
T +V Y G D + + + + W +I ++ R+D V+ ++
Sbjct: 93 TGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTR 152
Query: 128 KNEVSWTAMLMGYTQCGRIQD--AWELFKAMPM-----KSVVASNSMILGLGQNGEVQKA 180
+ + +L CG + F + +V N+++ + G +++A
Sbjct: 153 PDHFTLPHVLKA---CGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEA 209
Query: 181 RVVFDQMREK---DDATWSGMIKVYERKGYELEVIDLFTLM------QKEGVRVNFPSLI 231
++FD++ ++ D +W+ ++ + + +DLF+ M + R + S++
Sbjct: 210 SMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIV 269
Query: 232 SVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASK 291
++L C SL ++ ++VH +R DV+V + LI Y KCG + +F+ K
Sbjct: 270 NILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFK 329
Query: 292 DIVMWNS-----------------------------------IISGYAQYGLGEKSLKVF 316
D+V WN+ +I+GY+Q G ++L +F
Sbjct: 330 DVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLF 389
Query: 317 HEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFE-SMKSKYLV--------EPKTEHY 367
+M SG +P+ VT++ VLSAC+ G +G EI S+K+ L + Y
Sbjct: 390 RQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVY 449
Query: 368 ACMVDLLGRAGQVEDAMKLIEAMPFEP-DAIIWGSLLGACRTHMKLDLAEVAAKKLLQL- 425
++D+ + + A + + +P E + + W ++G H + + A K +++
Sbjct: 450 NALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGG---HAQYGDSNDALKLFVEMI 506
Query: 426 -EPKNAGP 432
EP P
Sbjct: 507 SEPYGVAP 514
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 124/313 (39%), Gaps = 67/313 (21%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKN----VVSWTVMLGGFIRDSRIDDA 56
M ++VVSW AMV GY + G A LF M ++N VV+WT ++ G+ + +A
Sbjct: 326 MEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEA 385
Query: 57 RRLFDMMPEKDVVAQTNM---VLGYCQD-GRVDEGREIFDEMPKKNVIS----------- 101
LF M + VL C G +G EI K +++
Sbjct: 386 LNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDED 445
Query: 102 ---WTTMISGYVNNNRIDVARKLFEVMP--EKNEVSWTAMLMGYTQCGRIQDAWELFKAM 156
+ +I Y AR +F+ +P E+N V+WT M+ G+ Q G DA +LF M
Sbjct: 446 LMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEM 505
Query: 157 --------PMKSVVA-----------------------------------SNSMILGLGQ 173
P ++ +N +I +
Sbjct: 506 ISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSK 565
Query: 174 NGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISV 233
G+V AR VFD M +K +W+ M+ Y G E +D+F M+K G + + + V
Sbjct: 566 CGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVV 625
Query: 234 LSVCASLASLDHG 246
L C+ +D G
Sbjct: 626 LYACSHCGMVDQG 638
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 75/164 (45%), Gaps = 19/164 (11%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVV----SWTVMLGGFIRDSRIDDA 56
M +++ +SWT+M+ GY G +EA +F +M + V ++ V+L +D
Sbjct: 579 MSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQG 638
Query: 57 RRLFDMM-------PEKDVVAQTNMVLGYCQDGRVDEGREIFDEMP-KKNVISWTTMISG 108
FD M P + A +L + GR+D+ +MP + + W ++S
Sbjct: 639 LSYFDSMSADYGLTPRAEHYACAIDLLA--RSGRLDKAWRTVKDMPMEPTAVVWVALLSA 696
Query: 109 YVNNNRIDVA----RKLFEVMPEKNEVSWTAMLMGYTQCGRIQD 148
++ +++A KL E M +N+ S+T + Y GR +D
Sbjct: 697 CRVHSNVELAEHALNKLVE-MNAENDGSYTLISNIYATAGRWKD 739
>gi|225454494|ref|XP_002276948.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
mitochondrial-like [Vitis vinifera]
Length = 913
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 225/620 (36%), Positives = 348/620 (56%), Gaps = 21/620 (3%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKN----VVSWTVMLGGFIRDSRIDDA 56
M RN SW +M+ Y G + +A +LF+++ + +V+W +L G ++
Sbjct: 295 MENRNTSSWNSMISSYAALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEV 354
Query: 57 RRLFDMMP----EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKK----NVISWTTMISG 108
+ M + + + T+++ + G ++ G+E + + +V T++I
Sbjct: 355 LNILQRMQGEGFKPNSSSMTSVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDM 414
Query: 109 YVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSV----VAS 164
YV N+ + A+ +F+ M +N +W +++ GY+ G +DA L M + + V
Sbjct: 415 YVKNHSLTSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTW 474
Query: 165 NSMILGLGQNGEVQKARVVFDQMRE----KDDATWSGMIKVYERKGYELEVIDLFTLMQK 220
N MI G G ++A V Q + + +W+ +I + G + + F MQ+
Sbjct: 475 NGMISGYAMWGCGKEALAVLHQTKSLGLTPNVVSWTALISGSSQAGNNRDSLKFFAQMQQ 534
Query: 221 EGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVK 280
EGV N S+ +L CASL+ L G+++H +R F DV+VA+ LI MY K L
Sbjct: 535 EGVMPNSASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKN 594
Query: 281 GKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSY 340
+F +K + WN +I G+A +GLG++++ VF+EM GV PD +T +LSAC
Sbjct: 595 AHKVFRRIQNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACKN 654
Query: 341 TGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWG 400
+G + EG + F+SM + Y + P+ EHY CMVDLLGRAG +++A LI MP +PDA IWG
Sbjct: 655 SGLIGEGWKYFDSMITDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIHTMPLKPDATIWG 714
Query: 401 SLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRN 460
+LLG+CR H L AE AAK L +LEP N+ YIL+ N+Y+ R+ D+ LR+ M
Sbjct: 715 ALLGSCRIHKNLKFAETAAKNLFKLEPNNSANYILMMNLYSIFNRWEDMDHLRELMGAAG 774
Query: 461 VIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDV 520
V SWI++ ++VH+F+ D HP+ I L ++ +++ GY PD + V ++
Sbjct: 775 VRNRQVWSWIQINQRVHVFSS-DEKPHPDAGKIYFELYQLVSEMKKLGYVPDVNCVYQNM 833
Query: 521 DEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIIL 580
DE EK L H+EKLA+ YGL+K+ G PIRV+KN R+C DCHSA K IS V RE+ L
Sbjct: 834 DEVEKQKILLSHTEKLAITYGLIKMKAGEPIRVIKNTRICSDCHSAAKYISLVKARELFL 893
Query: 581 RDANRFHHFKDGLCSCRDYW 600
RD RFHHF++G CSC D+W
Sbjct: 894 RDGVRFHHFREGKCSCNDFW 913
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 106/398 (26%), Positives = 186/398 (46%), Gaps = 39/398 (9%)
Query: 22 ITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQD 81
+ +A +F +MP + W + ++ ++ LF M + A+T ++ Q
Sbjct: 184 LEKANQVFHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQA 243
Query: 82 ----GRVDEGREI----FDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSW 133
G ++ ++I F +V +IS Y N ++++AR++F+ M +N SW
Sbjct: 244 CGKMGALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSMENRNTSSW 303
Query: 134 TAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDA 193
+M+ Y G + DAW LF + + + D
Sbjct: 304 NSMISSYAALGFLNDAWSLFYELESSDM---------------------------KPDIV 336
Query: 194 TWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQL 253
TW+ ++ + GY+ EV+++ MQ EG + N S+ SVL + L L+ G++ H +
Sbjct: 337 TWNCLLSGHFLHGYKEEVLNILQRMQGEGFKPNSSSMTSVLQAISELGFLNMGKETHGYV 396
Query: 254 VRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSL 313
+R FD DVYV + LI MY+K L + +FDN +++I WNS++SGY+ G+ E +L
Sbjct: 397 LRNGFDCDVYVGTSLIDMYVKNHSLTSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDAL 456
Query: 314 KVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDL 373
++ ++M G+ PD VT G++S + G KE + KS L P + ++
Sbjct: 457 RLLNQMEKEGIKPDLVTWNGMISGYAMWGCGKEALAVLHQTKSLGLT-PNVVSWTALISG 515
Query: 374 LGRAGQVEDAMKLIEAMPFE---PDAIIWGSLLGACRT 408
+AG D++K M E P++ LL AC +
Sbjct: 516 SSQAGNNRDSLKFFAQMQQEGVMPNSASITCLLRACAS 553
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 90/413 (21%), Positives = 181/413 (43%), Gaps = 17/413 (4%)
Query: 69 VAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN-NRIDVARKLFEVMPE 127
A N++ Y G +F +N + W + + + ++ + + ++F+ +
Sbjct: 67 AAAKNLISSYLGFGDFWSAAMVFYVGLPRNYLKWNSFVEEFKSSAGSLHIVLEVFKELHG 126
Query: 128 KNEVSWTAML-MGYTQCGRIQDAW---ELFKAMPMKS----VVASNSMILGLGQNGEVQK 179
K V + + + C R+ D W E+ + + V +++ G+ ++K
Sbjct: 127 KGVVFDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEK 186
Query: 180 ARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCAS 239
A VF +M + W+ I + + + ++LF MQ ++ +++ VL C
Sbjct: 187 ANQVFHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQACGK 246
Query: 240 LASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSI 299
+ +L+ +Q+H + R D DV + + LI+MY K G+L + +FD+ +++ WNS+
Sbjct: 247 MGALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSMENRNTSSWNSM 306
Query: 300 ISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYL 359
IS YA G + +F+E+ SS + PD VT +LS G +E I + M+ +
Sbjct: 307 ISSYAALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQRMQGEGF 366
Query: 360 VEPKTEHYACMVDLLGRAGQV---EDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAE 416
+P + ++ + G + ++ + F+ D + SL+ + L A+
Sbjct: 367 -KPNSSSMTSVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLTSAQ 425
Query: 417 VAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSW 469
++ +N + L + Y+ +G F D L M K IKP +W
Sbjct: 426 AVFD---NMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEG-IKPDLVTW 474
>gi|297802258|ref|XP_002869013.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314849|gb|EFH45272.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 693
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 217/569 (38%), Positives = 333/569 (58%), Gaps = 42/569 (7%)
Query: 73 NMVLG-YCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEV 131
N +LG Y + G + + R++FDEMP+++V SW M++GY ++ AR LF+ MPE++
Sbjct: 126 NRILGMYAKCGSLVDARKVFDEMPERDVCSWNVMVNGYAEVGLLEEARNLFDEMPERDSY 185
Query: 132 SWTAMLMGYTQCGRIQDAWELFKAMP---------------------MKSV--------- 161
SWTAM+ GY + + ++A L+ M +K +
Sbjct: 186 SWTAMVTGYVKKDQPEEALVLYSLMQRVPNSKPNIFTVSSAVAAAAAIKCIRRGKEIHGH 245
Query: 162 ----------VASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEV 211
V +S++ G+ G + +AR +FD++ +KD +W+ MI Y + E
Sbjct: 246 IVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIIDKDVVSWTSMIDRYFKSSRWREG 305
Query: 212 IDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITM 271
LF+ + R N + VL+ CA L + + GRQVH + R FD + +S LI M
Sbjct: 306 FSLFSELIGSCERPNEYTFSGVLNACADLTTEELGRQVHGYMTRVGFDPYSFASSSLIDM 365
Query: 272 YIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTL 331
Y KCG + + + D D+V S+I GYAQ G +++LK F + SG PD VT
Sbjct: 366 YTKCGNIESARHVVDGCPKPDLVSLTSLIGGYAQNGKPDEALKYFDLLLKSGTKPDHVTF 425
Query: 332 VGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMP 391
V VLSAC++ G V++G E F S+ K+ + ++HY C+VDLL R+G+ E ++ MP
Sbjct: 426 VNVLSACTHAGLVEKGLEFFYSITEKHDLTHTSDHYTCLVDLLARSGRFEQLKSVLSEMP 485
Query: 392 FEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAE 451
+P +W S+LG C T+ +DLAE AA++L ++EP+N Y+ ++NIYA+ G++ + +
Sbjct: 486 MKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGK 545
Query: 452 LRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCP 511
+RK M++ + K PG SW E+++K H+F D SHP + I+ L ++ ++E GY P
Sbjct: 546 MRKRMQEIGITKKPGSSWTEIKRKRHVFIAAD-TSHPMYNQIIEFLGELRKKMKEEGYVP 604
Query: 512 DSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLIS 571
+S VLHDV++E+K +L YHSEKLAVA+ ++ EG I+V KNLR C DCHSAIK IS
Sbjct: 605 ATSLVLHDVEDEQKEENLVYHSEKLAVAFAILSTEEGTAIKVFKNLRSCVDCHSAIKFIS 664
Query: 572 KVMGREIILRDANRFHHFKDGLCSCRDYW 600
K+ R+I +RD+ RFH F++G CSCRDYW
Sbjct: 665 KITKRKITIRDSTRFHCFENGQCSCRDYW 693
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 98/400 (24%), Positives = 177/400 (44%), Gaps = 59/400 (14%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MPER+V SW MV GY E G++ EA LF +MPE++ SWT M+ G+++ + ++A L+
Sbjct: 148 MPERDVCSWNVMVNGYAEVGLLEEARNLFDEMPERDSYSWTAMVTGYVKKDQPEEALVLY 207
Query: 61 DMMP----------------------------------------EKDVVAQTNMVLGYCQ 80
+M + D V ++++ Y +
Sbjct: 208 SLMQRVPNSKPNIFTVSSAVAAAAAIKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGK 267
Query: 81 DGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVM----PEKNEVSWTAM 136
G +DE R IFD++ K+V+SWT+MI Y ++R LF + NE +++ +
Sbjct: 268 CGCIDEARNIFDKIIDKDVVSWTSMIDRYFKSSRWREGFSLFSELIGSCERPNEYTFSGV 327
Query: 137 L-----MGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKD 191
L + + GR + S AS+S+I + G ++ AR V D + D
Sbjct: 328 LNACADLTTEELGRQVHGYMTRVGFDPYS-FASSSLIDMYTKCGNIESARHVVDGCPKPD 386
Query: 192 DATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHA 251
+ + +I Y + G E + F L+ K G + + + ++VLS C ++ G +
Sbjct: 387 LVSLTSLIGGYAQNGKPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFY 446
Query: 252 QLVR---CQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASK-DIVMWNSIISGYAQYG 307
+ D Y + L+ + + G + K + K +W S++ G + YG
Sbjct: 447 SITEKHDLTHTSDHY--TCLVDLLARSGRFEQLKSVLSEMPMKPSKFLWASVLGGCSTYG 504
Query: 308 LGEKSLKVFHEMFSSGVMPDD-VTLVGVLSACSYTGKVKE 346
+ + + E+F + P++ VT V + + + GK +E
Sbjct: 505 NIDLAEEAAQELFK--IEPENPVTYVTMANIYAAAGKWEE 542
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 53/88 (60%)
Query: 232 SVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASK 291
+++ VC+ +L+ G++VH + F + + + ++ MY KCG LV + +FD +
Sbjct: 92 NLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRILGMYAKCGSLVDARKVFDEMPER 151
Query: 292 DIVMWNSIISGYAQYGLGEKSLKVFHEM 319
D+ WN +++GYA+ GL E++ +F EM
Sbjct: 152 DVCSWNVMVNGYAEVGLLEEARNLFDEM 179
>gi|449486805|ref|XP_004157408.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g33170-like [Cucumis sativus]
Length = 1573
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 222/621 (35%), Positives = 353/621 (56%), Gaps = 25/621 (4%)
Query: 2 PERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFD 61
PE +++SW M+ Y + + EA F + + L +R D F
Sbjct: 956 PELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFT 1015
Query: 62 MMPE-----------KDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYV 110
+ + D T ++ Y + G++DE + ++ SW ++ GY+
Sbjct: 1016 LGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYI 1075
Query: 111 NNNRIDVARKLFEVMPE----------KNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKS 160
+N+ A + F +M E + + L+ Q +IQ A+ +
Sbjct: 1076 KSNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQ-AYAIKLGFNNDL 1134
Query: 161 VVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQK 220
V+S + + + + G++ A +F ++ D+ W+ MI Y G E + ++ LM+
Sbjct: 1135 WVSSGVLDMYI-KCGDMPNALELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLMRV 1193
Query: 221 EGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVK 280
GV+ + + +++ + L +L+ G+Q+HA +V+ + +D +V + L+ MY KCG +
Sbjct: 1194 SGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQD 1253
Query: 281 GKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSY 340
+F + +V WN+++ G AQ+G +++L +F M S+G+ PD VT +GVLSACS+
Sbjct: 1254 AYRVFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSACSH 1313
Query: 341 TGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWG 400
+G E + F++M Y + P+ EHY+C+VD LGRAG++++A +I +MPF+ A ++
Sbjct: 1314 SGLFSEAYKYFDAMFKTYGITPEIEHYSCLVDALGRAGRIQEAENVIASMPFKASASMYR 1373
Query: 401 SLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRN 460
+LLGACRT + A+ A KLL L+P ++ Y+LLSNIYA+ ++ DV + R M+ +N
Sbjct: 1374 ALLGACRTKGDAETAKRVADKLLALDPSDSSAYVLLSNIYAASRQWDDVTDARNMMKLKN 1433
Query: 461 VIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAG-YCPDSSFVLHD 519
V K PG SWI+V+ KVH+F D SHP+ +I +E + +RE G Y PD+ F L D
Sbjct: 1434 VKKDPGFSWIDVKNKVHLFVVDD-RSHPQASLIYEKIEDLMKRIREEGSYVPDTDFTLLD 1492
Query: 520 VDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREII 579
V+EEEK +L YHSEKLA+A+GL+ P IRV+KNLRVCGDCHSAIK ISK+ REI+
Sbjct: 1493 VEEEEKERALYYHSEKLAIAFGLISTPPSATIRVIKNLRVCGDCHSAIKCISKLTQREIV 1552
Query: 580 LRDANRFHHFKDGLCSCRDYW 600
LRDANRFHHF++G CSC DYW
Sbjct: 1553 LRDANRFHHFRNGTCSCGDYW 1573
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 100/438 (22%), Positives = 190/438 (43%), Gaps = 44/438 (10%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIR--DSRIDD--- 55
+P+R + + ++ Y + G + A +F + ++++V+W +L + + DS ++
Sbjct: 643 LPDRYLTN--NLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILAAYAQFADSSYENVLE 700
Query: 56 ARRLFDMMPE---------KDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMI 106
RLF ++ E + + ++ G+ Q G + +S ++
Sbjct: 701 GFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYAVKIGFELDLFVS-GALV 759
Query: 107 SGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVA--S 164
+ Y + AR LF+ MPE++ V W ML Y + +A F A S
Sbjct: 760 NIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEALRFFSAFHRSGFXPDFS 819
Query: 165 NSMILGLGQNGEVQKAR--------------VVFDQMREKDDATWSGMIKVYERKGYELE 210
N + G N +V R FDQ + W+ + + G +
Sbjct: 820 NLHCVIGGVNSDVSNNRKRHAEQVKAYAMKMFPFDQ--GSNIFAWNKKLTEFLHAGQIVA 877
Query: 211 VIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLIT 270
ID F + + + + +L+ +LS LD G Q+HA +++ F V V++ L+
Sbjct: 878 AIDCFKTLLRSTIGHDSVTLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMN 937
Query: 271 MYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVT 330
MY K G + + F N D++ WN++IS YAQ L +++ F ++ G+ PD T
Sbjct: 938 MYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFT 997
Query: 331 LVGVLSACSYTGKVKE----GREIF-ESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMK 385
L VL ACS TG E G ++ ++K + + ++DL + G++++A
Sbjct: 998 LASVLRACS-TGDEGEYFTLGSQVHVYAIKCGIINDSFVS--TALIDLYSKGGKMDEAEF 1054
Query: 386 LIEAMPFEPDAIIWGSLL 403
L+ ++ D W +++
Sbjct: 1055 LLHG-KYDFDLASWNAIM 1071
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 84/172 (48%), Gaps = 7/172 (4%)
Query: 239 SLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNS 298
++A L G++ HA++V D Y+ + LITMY KCG L + +FD + +D+V WNS
Sbjct: 623 AMADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNS 682
Query: 299 IISGYAQYGLGE-----KSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFES 353
I++ YAQ+ + ++F + G +TL +L C +G V+ E
Sbjct: 683 ILAAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVS-ETVHG 741
Query: 354 MKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
K E +V++ + G V A L + MP E DA++W +L A
Sbjct: 742 YAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMP-ERDAVLWNVMLKA 792
>gi|357493705|ref|XP_003617141.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518476|gb|AET00100.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 684
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 232/616 (37%), Positives = 355/616 (57%), Gaps = 21/616 (3%)
Query: 4 RNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDS---RIDDARRLF 60
R VV+WT+++ G V A F M NV + S +I +
Sbjct: 71 RTVVTWTSLISGCVHNRRFLPALLHFTNMRRDNVQPNDFTFPCVFKASAFVQIPMTGKQI 130
Query: 61 DMMPEK-----DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNR- 114
+ K DV + YC+ G + +FDEMP++N+ +W IS V + R
Sbjct: 131 HGLALKGGMIYDVFVGCSCFDMYCKTGFRGDACNMFDEMPQRNLATWNAYISNAVQDRRS 190
Query: 115 ---IDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWEL----FKAMPMKSVVASNSM 167
I ++ V E N +++ A L R+ +L + + V +N +
Sbjct: 191 LDAIVAFKEFLCVHGEPNSITFCAFLNACVDMVRLNLGRQLHAFIVRCGYKEDVSVANGL 250
Query: 168 ILGLGQNGEVQKARVVFDQM-REKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVN 226
I G+ G++ A +VF+++ K+ +W M+ + E +F +KE +
Sbjct: 251 IDFYGKCGDIVSAEMVFNRIGNRKNVVSWCSMLAALVQNHEEERACMVFLQARKEVEPTD 310
Query: 227 FPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFD 286
F + SVLS CA L L+ GR VHA V+ + +++V S L+ MY KCG + + +F
Sbjct: 311 F-MISSVLSACAELGGLELGRSVHALAVKACVEDNIFVGSALVDMYGKCGSIENAEQVFS 369
Query: 287 NFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMF--SSGVMPDDVTLVGVLSACSYTGKV 344
+++V WN++I GYA G + +L++F EM S G+ P VTL+ +LS CS G V
Sbjct: 370 ELPERNLVTWNAMIGGYAHQGDIDMALRLFEEMTLGSHGIRPSYVTLISILSVCSRVGAV 429
Query: 345 KEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLG 404
+ G +IFESM+ Y +EP EH+AC+VDLLGR+G V+ A + I+ M +P +WG+LLG
Sbjct: 430 ERGIQIFESMRLNYGIEPGAEHFACVVDLLGRSGLVDRAYEFIQNMAIQPTISVWGALLG 489
Query: 405 ACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKP 464
ACR H K +L ++AA+KL +L+ ++G +++LSN+ AS GR+ + +RK M+ + K
Sbjct: 490 ACRMHGKTELGKIAAEKLFELDHVDSGNHVVLSNMLASAGRWEEATVVRKEMKDIGIKKN 549
Query: 465 PGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEE 524
G SWI V+ ++H+F +D SH + I ML K+ G ++EAGY PD++ L D+++EE
Sbjct: 550 VGYSWIAVKNRIHVFQAKDS-SHDRNSEIQAMLGKLRGGMKEAGYVPDTNLSLFDLEDEE 608
Query: 525 KVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDAN 584
K + YHSEK+A+A+GL+ LP+GVPIR+ KNLR+CGDCHSAIK IS+++GREII+RD +
Sbjct: 609 KASEVWYHSEKIALAFGLIALPQGVPIRITKNLRICGDCHSAIKFISRIVGREIIVRDNH 668
Query: 585 RFHHFKDGLCSCRDYW 600
RFH FKDG CSC+DYW
Sbjct: 669 RFHRFKDGCCSCKDYW 684
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 130/268 (48%), Gaps = 20/268 (7%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM----PEKNVVSWTVMLGGFIRDSRIDDA 56
MP+RN+ +W A + V++ +A F + E N +++ L + R++
Sbjct: 169 MPQRNLATWNAYISNAVQDRRSLDAIVAFKEFLCVHGEPNSITFCAFLNACVDMVRLNLG 228
Query: 57 RRLFDMMP----EKDVVAQTNMVLGYCQDGRVDEGREIFDEM-PKKNVISWTTMISGYVN 111
R+L + ++DV ++ Y + G + +F+ + +KNV+SW +M++ V
Sbjct: 229 RQLHAFIVRCGYKEDVSVANGLIDFYGKCGDIVSAEMVFNRIGNRKNVVSWCSMLAALVQ 288
Query: 112 NNRIDVARKLF-----EVMPEK---NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVA 163
N+ + A +F EV P + V +G + GR A + KA ++
Sbjct: 289 NHEEERACMVFLQARKEVEPTDFMISSVLSACAELGGLELGRSVHALAV-KACVEDNIFV 347
Query: 164 SNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQ--KE 221
++++ G+ G ++ A VF ++ E++ TW+ MI Y +G + LF M
Sbjct: 348 GSALVDMYGKCGSIENAEQVFSELPERNLVTWNAMIGGYAHQGDIDMALRLFEEMTLGSH 407
Query: 222 GVRVNFPSLISVLSVCASLASLDHGRQV 249
G+R ++ +LIS+LSVC+ + +++ G Q+
Sbjct: 408 GIRPSYVTLISILSVCSRVGAVERGIQI 435
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 98/206 (47%), Gaps = 23/206 (11%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDM 62
E N+ +A+V Y + G I A +F ++PE+N+V+W M+GG+ ID A RLF+
Sbjct: 342 EDNIFVGSALVDMYGKCGSIENAEQVFSELPERNLVTWNAMIGGYAHQGDIDMALRLFEE 401
Query: 63 MPEKDVVAQTNMV-----LGYCQD-GRVDEGREIFDEMPKKNVIS-----WTTMISGYVN 111
M + + V L C G V+ G +IF+ M I + ++
Sbjct: 402 MTLGSHGIRPSYVTLISILSVCSRVGAVERGIQIFESMRLNYGIEPGAEHFACVVDLLGR 461
Query: 112 NNRIDVARKLFEVMPEKNEVS-WTAML-----MGYTQCGRIQDAWELFKAMPMKSVVASN 165
+ +D A + + M + +S W A+L G T+ G+I A +LF+ + V + N
Sbjct: 462 SGLVDRAYEFIQNMAIQPTISVWGALLGACRMHGKTELGKIA-AEKLFE---LDHVDSGN 517
Query: 166 SMILG--LGQNGEVQKARVVFDQMRE 189
++L L G ++A VV +M++
Sbjct: 518 HVVLSNMLASAGRWEEATVVRKEMKD 543
Score = 45.8 bits (107), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 76/180 (42%), Gaps = 5/180 (2%)
Query: 246 GRQVHAQLVRCQFD-VDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYA 304
GR +HA ++R + ++++ L+ MY K L + + + +V W S+ISG
Sbjct: 25 GRTIHAHIIRTHVTPLPSFLSNHLVNMYSKLDLLNSAQHVLSLTHLRTVVTWTSLISGCV 84
Query: 305 QYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKT 364
+L F M V P+D T V A ++ G++I ++
Sbjct: 85 HNRRFLPALLHFTNMRRDNVQPNDFTFPCVFKASAFVQIPMTGKQIHGLALKGGMIYDVF 144
Query: 365 EHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL-GACRTHMKLDLAEVAAKKLL 423
+C D+ + G DA + + MP + + W + + A + LD A VA K+ L
Sbjct: 145 VGCSCF-DMYCKTGFRGDACNMFDEMP-QRNLATWNAYISNAVQDRRSLD-AIVAFKEFL 201
Score = 45.4 bits (106), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 80/176 (45%), Gaps = 25/176 (14%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM--------PEK----NVVSWTVMLGGFI 48
+PERN+V+W AM+ GY +G I A LF +M P +++S +G
Sbjct: 371 LPERNLVTWNAMIGGYAHQGDIDMALRLFEEMTLGSHGIRPSYVTLISILSVCSRVGAVE 430
Query: 49 RDSRIDDARRL-FDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVIS-WTTMI 106
R +I ++ RL + + P + A +LG + G VD E M + IS W ++
Sbjct: 431 RGIQIFESMRLNYGIEPGAEHFACVVDLLG--RSGLVDRAYEFIQNMAIQPTISVWGALL 488
Query: 107 SGYVNNNRIDV----ARKLFEV--MPEKNEVSWTAMLMGYTQCGRIQDAWELFKAM 156
+ + ++ A KLFE+ + N V + ML GR ++A + K M
Sbjct: 489 GACRMHGKTELGKIAAEKLFELDHVDSGNHVVLSNML---ASAGRWEEATVVRKEM 541
>gi|449447363|ref|XP_004141438.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Cucumis sativus]
Length = 1573
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 222/621 (35%), Positives = 353/621 (56%), Gaps = 25/621 (4%)
Query: 2 PERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFD 61
PE +++SW M+ Y + + EA F + + L +R D F
Sbjct: 956 PELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFT 1015
Query: 62 MMPE-----------KDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYV 110
+ + D T ++ Y + G++DE + ++ SW ++ GY+
Sbjct: 1016 LGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYI 1075
Query: 111 NNNRIDVARKLFEVMPE----------KNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKS 160
+N+ A + F +M E + + L+ Q +IQ A+ +
Sbjct: 1076 KSNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQ-AYAIKLGFNNDL 1134
Query: 161 VVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQK 220
V+S + + + + G++ A +F ++ D+ W+ MI Y G E + ++ LM+
Sbjct: 1135 WVSSGVLDMYI-KCGDMPNALELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLMRV 1193
Query: 221 EGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVK 280
GV+ + + +++ + L +L+ G+Q+HA +V+ + +D +V + L+ MY KCG +
Sbjct: 1194 SGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQD 1253
Query: 281 GKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSY 340
+F + +V WN+++ G AQ+G +++L +F M S+G+ PD VT +GVLSACS+
Sbjct: 1254 AYRVFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSACSH 1313
Query: 341 TGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWG 400
+G E + F++M Y + P+ EHY+C+VD LGRAG++++A +I +MPF+ A ++
Sbjct: 1314 SGLFSEAYKYFDAMFKTYGITPEIEHYSCLVDALGRAGRIQEAENVIASMPFKASASMYR 1373
Query: 401 SLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRN 460
+LLGACRT + A+ A KLL L+P ++ Y+LLSNIYA+ ++ DV + R M+ +N
Sbjct: 1374 ALLGACRTKGDAETAKRVADKLLALDPSDSSAYVLLSNIYAASRQWDDVTDARNMMKLKN 1433
Query: 461 VIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAG-YCPDSSFVLHD 519
V K PG SWI+V+ KVH+F D SHP+ +I +E + +RE G Y PD+ F L D
Sbjct: 1434 VKKDPGFSWIDVKNKVHLFVVDD-RSHPQASLIYEKIEDLMKRIREEGSYVPDTDFTLLD 1492
Query: 520 VDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREII 579
V+EEEK +L YHSEKLA+A+GL+ P IRV+KNLRVCGDCHSAIK ISK+ REI+
Sbjct: 1493 VEEEEKERALYYHSEKLAIAFGLISTPPSATIRVIKNLRVCGDCHSAIKCISKLTQREIV 1552
Query: 580 LRDANRFHHFKDGLCSCRDYW 600
LRDANRFHHF++G CSC DYW
Sbjct: 1553 LRDANRFHHFRNGTCSCGDYW 1573
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 100/438 (22%), Positives = 190/438 (43%), Gaps = 44/438 (10%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIR--DSRIDD--- 55
+P+R + + ++ Y + G + A +F + ++++V+W +L + + DS ++
Sbjct: 643 LPDRYLTN--NLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILAAYAQFADSSYENVLE 700
Query: 56 ARRLFDMMPE---------KDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMI 106
RLF ++ E + + ++ G+ Q G + +S ++
Sbjct: 701 GFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYAVKIGFELDLFVS-GALV 759
Query: 107 SGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVA--S 164
+ Y + AR LF+ MPE++ V W ML Y + +A F A S
Sbjct: 760 NIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEALRFFSAFHRSGFFPDFS 819
Query: 165 NSMILGLGQNGEVQKAR--------------VVFDQMREKDDATWSGMIKVYERKGYELE 210
N + G N +V R FDQ + W+ + + G +
Sbjct: 820 NLHCVIGGVNSDVSNNRKRHAEQVKAYAMKMFPFDQ--GSNIFAWNKKLTEFLHAGQIVA 877
Query: 211 VIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLIT 270
ID F + + + + +L+ +LS LD G Q+HA +++ F V V++ L+
Sbjct: 878 AIDCFKTLLRSTIGHDSVTLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMN 937
Query: 271 MYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVT 330
MY K G + + F N D++ WN++IS YAQ L +++ F ++ G+ PD T
Sbjct: 938 MYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFT 997
Query: 331 LVGVLSACSYTGKVKE----GREIF-ESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMK 385
L VL ACS TG E G ++ ++K + + ++DL + G++++A
Sbjct: 998 LASVLRACS-TGDEGEYFTLGSQVHVYAIKCGIINDSFVS--TALIDLYSKGGKMDEAEF 1054
Query: 386 LIEAMPFEPDAIIWGSLL 403
L+ ++ D W +++
Sbjct: 1055 LLHG-KYDFDLASWNAIM 1071
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 84/172 (48%), Gaps = 7/172 (4%)
Query: 239 SLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNS 298
++A L G++ HA++V D Y+ + LITMY KCG L + +FD + +D+V WNS
Sbjct: 623 AMADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNS 682
Query: 299 IISGYAQYGLGE-----KSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFES 353
I++ YAQ+ + ++F + G +TL +L C +G V+ E
Sbjct: 683 ILAAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVS-ETVHG 741
Query: 354 MKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
K E +V++ + G V A L + MP E DA++W +L A
Sbjct: 742 YAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMP-ERDAVLWNVMLKA 792
>gi|62320270|dbj|BAD94552.1| hypothetical protein [Arabidopsis thaliana]
Length = 694
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 222/641 (34%), Positives = 357/641 (55%), Gaps = 53/641 (8%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVV 69
T ++ G IT A +F +P + W ++ G+ R++ DA ++ M V
Sbjct: 57 TKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVS 116
Query: 70 AQTNMV---------LGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARK 120
+ L + Q GR ++F +V +I+ Y R+ AR
Sbjct: 117 PDSFTFPHLLKACSGLSHLQMGRFVHA-QVFRLGFDADVFVQNGLIALYAKCRRLGSART 175
Query: 121 LFE--VMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAM----------PMKSVVASNSMI 168
+FE +PE+ VSWTA++ Y Q G +A E+F M + SV+ + + +
Sbjct: 176 VFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSHMRKMDVKPDWVALVSVLNAFTCL 235
Query: 169 LGLGQN-----------------------------GEVQKARVVFDQMREKDDATWSGMI 199
L Q G+V A+++FD+M+ + W+ MI
Sbjct: 236 QDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMI 295
Query: 200 KVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFD 259
Y + GY E ID+F M + VR + S+ S +S CA + SL+ R ++ + R +
Sbjct: 296 SGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYR 355
Query: 260 VDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEM 319
DV+++S LI M+ KCG + +L+FD +D+V+W+++I GY +G +++ ++ M
Sbjct: 356 DDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAM 415
Query: 320 FSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQ 379
GV P+DVT +G+L AC+++G V+EG F M + + + P+ +HYAC++DLLGRAG
Sbjct: 416 ERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNLM-ADHKINPQQQHYACVIDLLGRAGH 474
Query: 380 VEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNI 439
++ A ++I+ MP +P +WG+LL AC+ H ++L E AA++L ++P N G Y+ LSN+
Sbjct: 475 LDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNL 534
Query: 440 YASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEK 499
YA+ + VAE+R M+++ + K GCSW+EV ++ F D SHP + I R +E
Sbjct: 535 YAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGD-KSHPRYEEIERQVEW 593
Query: 500 IGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRV 559
I L+E G+ + LHD+++EE +L HSE++A+AYGL+ P+G P+R+ KNLR
Sbjct: 594 IESRLKEGGFVANKDASLHDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRITKNLRA 653
Query: 560 CGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
C +CH+A KLISK++ REI++RD NRFHHFKDG+CSC DYW
Sbjct: 654 CVNCHAATKLISKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 75/165 (45%), Gaps = 12/165 (7%)
Query: 247 RQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQY 306
+Q+HA+L+ ++ + LI G++ + +FD+ I WN+II GY++
Sbjct: 38 KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRN 97
Query: 307 GLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGR----EIFE-SMKSKYLVE 361
+ +L ++ M + V PD T +L ACS ++ GR ++F + V+
Sbjct: 98 NHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQ 157
Query: 362 PKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAII-WGSLLGA 405
++ L + ++ A + E +P I+ W +++ A
Sbjct: 158 NG------LIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSA 196
>gi|449505835|ref|XP_004162581.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g02750-like [Cucumis sativus]
Length = 741
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 194/482 (40%), Positives = 321/482 (66%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
+P NVVSW M+ G+ G +TEA LF +MP KN+VSW M+G ++R+++IDDA +LF
Sbjct: 228 IPTPNVVSWVTMLSGFAHYGRMTEARNLFNEMPTKNLVSWNAMIGAYVRENQIDDAYKLF 287
Query: 61 DMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARK 120
MPEKD V+ T M+ GY + G++ + REI + MP KN+ + T MI+GY+ + R+D A +
Sbjct: 288 MEMPEKDSVSWTAMINGYVRVGKLLQAREILNLMPYKNIAAQTAMINGYLQSGRMDEANE 347
Query: 121 LFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKA 180
+F + ++ V W +M+ GY CGR +A LF+ M K +V+ N+MI Q G++ KA
Sbjct: 348 IFSQISVRDSVCWNSMITGYAHCGRTDEALRLFQEMVCKDMVSWNTMIAAYAQAGQMDKA 407
Query: 181 RVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASL 240
+F++M+E++ +W+ +I Y + G E ++ F LM+++G + + +++ L A+L
Sbjct: 408 LEMFNEMQERNVVSWNSLITGYVQNGLYFEALNCFILMKQQGEKPDQTTIVCCLRASANL 467
Query: 241 ASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSII 300
A+L+ G Q+H ++ F D++V + ++TMY K G + + + +F KD+V WNS+I
Sbjct: 468 AALNVGVQLHHLTIKTGFGNDLFVKNAILTMYAKSGRVPEAENVFAEIKXKDVVSWNSLI 527
Query: 301 SGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLV 360
+GYA G G++++++F M G++PD+VT G+LSAC++ G V +G +F+SM Y +
Sbjct: 528 AGYALNGCGKEAVELFEVMPLRGIIPDEVTFTGLLSACNHGGFVDQGLNLFKSMTETYSI 587
Query: 361 EPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAK 420
+P++EHYAC+++LLGR G++E+A+++++ M A IWG+LL ACR H L+LA+ +A+
Sbjct: 588 KPQSEHYACVINLLGRVGRLEEAVEIVQGMKTVSSAKIWGALLWACRIHHNLELAKYSAE 647
Query: 421 KLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFT 480
+LL LEP+NA Y+LLSN++A GR+ V +R M++ K PGCSWIE++ ++H F
Sbjct: 648 RLLALEPQNASNYVLLSNMHAEAGRWDMVERVRVLMKENKAEKQPGCSWIEIDNQLHCFL 707
Query: 481 GR 482
+
Sbjct: 708 SK 709
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 115/393 (29%), Positives = 205/393 (52%), Gaps = 46/393 (11%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
M ERN+V++ +M+ Y + G I A LF MP++N+VSW M+ G++ + ++DA RLF
Sbjct: 41 MTERNIVTYNSMISAYAKNGRIANARELFDLMPQRNLVSWNSMIAGYLHNELVEDAARLF 100
Query: 61 DMMPEKDVVAQTNMVLGYCQDGRVDEGRE------------------------------- 89
D M ++D+ + T M+ Y + G +++ RE
Sbjct: 101 DRMFKRDIYSWTLMITCYTRIGELEKARELFNLLPDKQDTVCRNALIAGYAKKRLFREAK 160
Query: 90 -IFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQD 148
+FDEM KNV+SW +++SGY N ++ + + FE M E+N VSW M+ GY G +
Sbjct: 161 KLFDEMLVKNVVSWNSILSGYTKNGKMQLGLQFFEAMGERNVVSWNLMVDGYVGVGDLDS 220
Query: 149 AWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYE 208
AW FK +P +VV+ +M+ G G + +AR +F++M K+ +W+ MI Y R+
Sbjct: 221 AWMFFKKIPTPNVVSWVTMLSGFAHYGRMTEARNLFNEMPTKNLVSWNAMIGAYVRENQI 280
Query: 209 LEVIDLFTLM-QKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASV 267
+ LF M +K+ V S ++++ + L R++ + ++ +
Sbjct: 281 DDAYKLFMEMPEKDSV-----SWTAMINGYVRVGKLLQAREI----LNLMPYKNIAAQTA 331
Query: 268 LITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPD 327
+I Y++ G + + IF + +D V WNS+I+GYA G +++L++F EM V D
Sbjct: 332 MINGYLQSGRMDEANEIFSQISVRDSVCWNSMITGYAHCGRTDEALRLFQEM----VCKD 387
Query: 328 DVTLVGVLSACSYTGKVKEGREIFESMKSKYLV 360
V+ +++A + G++ + E+F M+ + +V
Sbjct: 388 MVSWNTMIAAYAQAGQMDKALEMFNEMQERNVV 420
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 99/415 (23%), Positives = 206/415 (49%), Gaps = 22/415 (5%)
Query: 49 RDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISG 108
R RI++A +F M E+++V +M+ Y ++GR+ RE+FD MP++N++SW +MI+G
Sbjct: 27 RSGRIEEAVAVFLKMTERNIVTYNSMISAYAKNGRIANARELFDLMPQRNLVSWNSMIAG 86
Query: 109 YVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKS-VVASNSM 167
Y++N ++ A +LF+ M +++ SWT M+ YT+ G ++ A ELF +P K V N++
Sbjct: 87 YLHNELVEDAARLFDRMFKRDIYSWTLMITCYTRIGELEKARELFNLLPDKQDTVCRNAL 146
Query: 168 ILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNF 227
I G + ++A+ +FD+M K+ +W+ ++ Y + G + F M + N
Sbjct: 147 IAGYAKKRLFREAKKLFDEMLVKNVVSWNSILSGYTKNGKMQLGLQFFEAMGER----NV 202
Query: 228 PSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDN 287
S ++ + LD ++ +V +++ + G + + + +F+
Sbjct: 203 VSWNLMVDGYVGVGDLDSAWMFFKKIP----TPNVVSWVTMLSGFAHYGRMTEARNLFNE 258
Query: 288 FASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEG 347
+K++V WN++I Y + + + K+F EM D V+ +++ GK+ +
Sbjct: 259 MPTKNLVSWNAMIGAYVRENQIDDAYKLFMEMPEK----DSVSWTAMINGYVRVGKLLQA 314
Query: 348 REIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACR 407
REI M K + M++ ++G++++A ++ + D++ W S++
Sbjct: 315 REILNLMPYKNIAAQ-----TAMINGYLQSGRMDEANEIFSQISVR-DSVCWNSMITG-- 366
Query: 408 THMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVI 462
+ + A + ++ K+ + + YA G+ E+ M++RNV+
Sbjct: 367 -YAHCGRTDEALRLFQEMVCKDMVSWNTMIAAYAQAGQMDKALEMFNEMQERNVV 420
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 103/365 (28%), Positives = 178/365 (48%), Gaps = 22/365 (6%)
Query: 99 VISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPM 158
V + IS + RI+ A +F M E+N V++ +M+ Y + GRI +A ELF MP
Sbjct: 15 VFTQNLRISQLGRSGRIEEAVAVFLKMTERNIVTYNSMISAYAKNGRIANARELFDLMPQ 74
Query: 159 KSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLM 218
+++V+ NSMI G N V+ A +FD+M ++D +W+ MI Y R G + +LF L+
Sbjct: 75 RNLVSWNSMIAGYLHNELVEDAARLFDRMFKRDIYSWTLMITCYTRIGELEKARELFNLL 134
Query: 219 QKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGEL 278
+ V +LI A A R+ +L +V + +++ Y K G++
Sbjct: 135 PDKQDTVCRNALI------AGYAKKRLFREAK-KLFDEMLVKNVVSWNSILSGYTKNGKM 187
Query: 279 VKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSAC 338
G F+ +++V WN ++ GY G + + F ++ + P+ V+ V +LS
Sbjct: 188 QLGLQFFEAMGERNVVSWNLMVDGYVGVGDLDSAWMFFKKIPT----PNVVSWVTMLSGF 243
Query: 339 SYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAII 398
++ G++ E R +F M +K LV + M+ R Q++DA KL MP E D++
Sbjct: 244 AHYGRMTEARNLFNEMPTKNLVS-----WNAMIGAYVRENQIDDAYKLFMEMP-EKDSVS 297
Query: 399 WGSLLGACRTHMKLDLAEVAAKKLLQLEP-KNAGPYILLSNIYASQGRFHDVAELRKNMR 457
W +++ KL + A+++L L P KN + N Y GR + E+ +
Sbjct: 298 WTAMINGYVRVGKL----LQAREILNLMPYKNIAAQTAMINGYLQSGRMDEANEIFSQIS 353
Query: 458 KRNVI 462
R+ +
Sbjct: 354 VRDSV 358
>gi|449443608|ref|XP_004139569.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cucumis sativus]
Length = 878
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 234/620 (37%), Positives = 358/620 (57%), Gaps = 27/620 (4%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV-VSWTVMLGGFIRDSRIDDARRL 59
M R+ V+W M+ GY G E +F +M V +S TV F ++ +R
Sbjct: 266 MVVRDSVTWNIMIGGYAAIGFYLEGFQMFHRMRLAGVKLSRTV----FCTALKLCSQQRE 321
Query: 60 FDMMPE-------------KDVVAQTNMVLGYCQDGRVDEGREIFDEM-PKKNVISWTTM 105
+ + +D+ +T +++ Y + VDE ++F NV++WT M
Sbjct: 322 LNFTKQLHCGVVKNGYEFAQDI--RTALMVTYSKCSSVDEAFKLFSMADAAHNVVTWTAM 379
Query: 106 ISGYVNNNRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSV 161
I G+V NN + A LF M + N +++ +L G Q ++ KA K
Sbjct: 380 IGGFVQNNNNEKAVDLFCQMSREGVRPNHFTYSTVLAGKPSSLLSQLHAQIIKAYYEKVP 439
Query: 162 VASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKE 221
+ +++ + G V ++ VF + KD WS M+ + + +++F + KE
Sbjct: 440 SVATALLDAYVKTGNVVESARVFYSIPAKDIVAWSAMLTGLAQTRDSEKAMEVFIQLVKE 499
Query: 222 GVRVNFPSLISVLSVCAS-LASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVK 280
GV+ N + SV++ C+S A+++HG+Q+HA V+ + V+S L+TMY K G +
Sbjct: 500 GVKPNEYTFSSVINACSSSAATVEHGKQIHATAVKSGKSNALCVSSALLTMYSKKGNIES 559
Query: 281 GKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSY 340
+ +F +DIV WNS+I+GY Q+G +K+L+VF M + G+ DDVT +GVL+AC++
Sbjct: 560 AEKVFTRQEERDIVSWNSMITGYGQHGDAKKALEVFQIMQNQGLPLDDVTFIGVLTACTH 619
Query: 341 TGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWG 400
G V+EG + F M Y ++ K EHY+CMVDL RAG + AM +I MPF IW
Sbjct: 620 AGLVEEGEKYFNIMIKDYHIDKKIEHYSCMVDLYSRAGMFDKAMDIINGMPFPASPTIWR 679
Query: 401 SLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRN 460
+LL ACR H L+L ++AA+KL+ L+P +A Y+LLSNI+A G + + A +RK M +R
Sbjct: 680 TLLAACRVHRNLELGKLAAEKLVSLQPNDAVGYVLLSNIHAVAGNWEEKAHVRKLMDERK 739
Query: 461 VIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDV 520
V K GCSWIE++ ++ F D VSHP ++ LE++ L++ GY PD+++V HDV
Sbjct: 740 VKKEAGCSWIEIKNRIFSFLAGD-VSHPFSDLVYAKLEELSIKLKDMGYQPDTNYVFHDV 798
Query: 521 DEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIIL 580
+EE K L HSE+LA+AYGL+ LP G PI++ KNLR+CGDCH+ I+LIS + R +I+
Sbjct: 799 EEEHKEAILSQHSERLAIAYGLIALPPGAPIQIEKNLRICGDCHNVIELISLIEERTLIV 858
Query: 581 RDANRFHHFKDGLCSCRDYW 600
RD+NRFHHFK G+CSC YW
Sbjct: 859 RDSNRFHHFKGGVCSCGGYW 878
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 118/454 (25%), Positives = 211/454 (46%), Gaps = 65/454 (14%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVV 69
T++V Y++ + +F +M KNVVSWT +L G+ R+ D+ L + M + V
Sbjct: 143 TSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSLLSGYARNGLNDEVIHLINQMQMEGVN 202
Query: 70 AQT---NMVLGYCQDGRVDEGREIFDEMPKKNVISWTT-----MISGYVNNNRIDVARKL 121
VLG D + EG M KN +TT +I Y+ + + A +
Sbjct: 203 PNGFTFATVLGALADESIIEGGVQVHAMIVKNGFEFTTFVCNALICMYLKSEMVGDAEAV 262
Query: 122 FEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMI------------- 168
F+ M ++ V+W M+ GY G + +++F M + V S ++
Sbjct: 263 FDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHRMRLAGVKLSRTVFCTALKLCSQQREL 322
Query: 169 -------LGLGQNG-----EVQKA-RVVFDQMREKDDA--------------TWSGMIKV 201
G+ +NG +++ A V + + D+A TW+ MI
Sbjct: 323 NFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSSVDEAFKLFSMADAAHNVVTWTAMIGG 382
Query: 202 YERKGYELEVIDLFTLMQKEGVRVNFPSLISVLS-VCASLASLDHGRQVHAQLVRCQFDV 260
+ + + +DLF M +EGVR N + +VL+ +SL S Q+HAQ+++ ++
Sbjct: 383 FVQNNNNEKAVDLFCQMSREGVRPNHFTYSTVLAGKPSSLLS-----QLHAQIIKAYYEK 437
Query: 261 DVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMF 320
VA+ L+ Y+K G +V+ +F + +KDIV W+++++G AQ EK+++VF ++
Sbjct: 438 VPSVATALLDAYVKTGNVVESARVFYSIPAKDIVAWSAMLTGLAQTRDSEKAMEVFIQLV 497
Query: 321 SSGVMPDDVTLVGVLSACSYT-GKVKEGREI----FESMKSKYLVEPKTEHYACMVDLLG 375
GV P++ T V++ACS + V+ G++I +S KS L + ++ +
Sbjct: 498 KEGVKPNEYTFSSVINACSSSAATVEHGKQIHATAVKSGKSNALCVS-----SALLTMYS 552
Query: 376 RAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTH 409
+ G +E A K+ E D + W S++ H
Sbjct: 553 KKGNIESAEKVFTRQE-ERDIVSWNSMITGYGQH 585
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 93/347 (26%), Positives = 162/347 (46%), Gaps = 15/347 (4%)
Query: 66 KDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVM 125
+DV T++V Y + ++GR IFDEM KNV+SWT+++SGY N D L M
Sbjct: 137 EDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSLLSGYARNGLNDEVIHLINQM 196
Query: 126 PEK--NEVSWT-AMLMGYTQCGRIQDAWELFKAMPMK-----SVVASNSMILGLGQNGEV 177
+ N +T A ++G I + AM +K + N++I ++ V
Sbjct: 197 QMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNGFEFTTFVCNALICMYLKSEMV 256
Query: 178 QKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVC 237
A VFD M +D TW+ MI Y G+ LE +F M+ GV+++ + L +C
Sbjct: 257 GDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHRMRLAGVKLSRTVFCTALKLC 316
Query: 238 ASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKG-KLIFDNFASKDIVMW 296
+ L+ +Q+H +V+ ++ + + L+ Y KC + + KL A+ ++V W
Sbjct: 317 SQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSSVDEAFKLFSMADAAHNVVTW 376
Query: 297 NSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKS 356
++I G+ Q EK++ +F +M GV P+ T VL+ GK +
Sbjct: 377 TAMIGGFVQNNNNEKAVDLFCQMSREGVRPNHFTYSTVLA-----GKPSSLLSQLHAQII 431
Query: 357 KYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
K E ++D + G V ++ ++ ++P D + W ++L
Sbjct: 432 KAYYEKVPSVATALLDAYVKTGNVVESARVFYSIP-AKDIVAWSAML 477
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 83/338 (24%), Positives = 146/338 (43%), Gaps = 31/338 (9%)
Query: 87 GREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKN-EVSWTAMLMGYTQCGR 145
++FDE P K++ + ++ + NN A LF+ + V + CG
Sbjct: 57 AHQLFDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVCGV 116
Query: 146 IQDA-------WELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGM 198
+ D + K+ ++ V S++ + + + R +FD+M K+ +W+ +
Sbjct: 117 LFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSL 176
Query: 199 IKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQF 258
+ Y R G EVI L MQ EGV N + +VL A + ++ G QVHA +V+ F
Sbjct: 177 LSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNGF 236
Query: 259 DVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHE 318
+ +V + LI MY+K + + +FD+ +D V WN +I GYA G + ++FH
Sbjct: 237 EFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHR 296
Query: 319 MFSSGVMPDDVTLVGVLSACS-----------YTGKVKEGREIFESMKSKYLVEPKTEHY 367
M +GV L CS + G VK G E + +++ +V
Sbjct: 297 MRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVT------ 350
Query: 368 ACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
+ V++A KL + + W +++G
Sbjct: 351 ------YSKCSSVDEAFKLFSMADAAHNVVTWTAMIGG 382
>gi|357125908|ref|XP_003564631.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Brachypodium distachyon]
Length = 647
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 220/577 (38%), Positives = 336/577 (58%), Gaps = 48/577 (8%)
Query: 67 DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMP 126
D N++L Y G + R +F+ + K+NV+SW +I G + N + AR+LF+ MP
Sbjct: 76 DRFTTNNLLLAYADLGDLPTARHLFEGISKRNVMSWNILIGGCIKNGDLGSARELFDKMP 135
Query: 127 EKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQ------------N 174
+N +W AM+ G T G +D+ + F AM + + GLG +
Sbjct: 136 TRNVATWNAMVAGLTNVGLDEDSLQFFLAMRREGMHPDE---FGLGSVFRCCAGLLDVVS 192
Query: 175 GEVQKARVVFDQMREKDDATWSGMIKVYERKGYELE------------------------ 210
G A VV M + D + + +Y R G E
Sbjct: 193 GRQVHAYVVRSGM-DSDMCVGNSLAHMYMRCGCLAEGEAVLRALPSLTIVSFNTTIAGRT 251
Query: 211 -------VIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVY 263
++ F++M+ V + + +S +S C+ LA+L G+QVHAQ+++ D V
Sbjct: 252 QNGDSEGALEYFSMMRGVEVAPDVVTFVSAISCCSDLAALAQGQQVHAQVIKAGVDKVVP 311
Query: 264 VASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSG 323
V + L+ MY +CG L + ++D + D+ + +++IS +G G K++++F +M + G
Sbjct: 312 VITSLVHMYSRCGCLGDSERVYDGYCGLDLFLLSAMISACGFHGQGHKAVELFKQMMNGG 371
Query: 324 VMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDA 383
P++VT + +L ACS++G EG E FE M Y +P +HY C+VDLLGR+G +++A
Sbjct: 372 AEPNEVTFLALLYACSHSGLKDEGLEFFELMTKTYGFQPSVKHYNCIVDLLGRSGCLDEA 431
Query: 384 MKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQ 443
LI +MP D +IW +LL AC+T D+AE A+++++ +P+++ PY+LLSNI A+
Sbjct: 432 EALILSMPVRADGVIWKTLLSACKTQKNFDMAERIAERVIESDPRDSAPYVLLSNIRATS 491
Query: 444 GRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGL 503
R+ DV E+RK MR++++ K PG SW+E + +VH F D SHP I L+++ G
Sbjct: 492 KRWGDVTEVRKIMREKDIRKEPGVSWVEHKGQVHQFCTGD-KSHPRQGEIDEYLKEMMGK 550
Query: 504 LREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDC 563
+R+ GY PD + V HD+++EEK SL +HSEKLA+A+ + LPEGVPIRVMKNLRVC DC
Sbjct: 551 IRQCGYAPDMTMVFHDMEDEEKEVSLTHHSEKLAIAFAFLNLPEGVPIRVMKNLRVCDDC 610
Query: 564 HSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
H AIKLIS+V GREI++RD +RFHHF+DG CSC DYW
Sbjct: 611 HVAIKLISQVTGREIVVRDVSRFHHFRDGRCSCGDYW 647
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 76/353 (21%), Positives = 143/353 (40%), Gaps = 53/353 (15%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
+ +RNV+SW ++ G ++ G + A LF +MP +NV +W M+ G +D+ + F
Sbjct: 103 ISKRNVMSWNILIGGCIKNGDLGSARELFDKMPTRNVATWNAMVAGLTNVGLDEDSLQFF 162
Query: 61 ------DMMPEK--------------DVVA-------------QTNMVLG------YCQD 81
M P++ DVV+ ++M +G Y +
Sbjct: 163 LAMRREGMHPDEFGLGSVFRCCAGLLDVVSGRQVHAYVVRSGMDSDMCVGNSLAHMYMRC 222
Query: 82 GRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLF------EVMPE----KNEV 131
G + EG + +P ++S+ T I+G N + A + F EV P+ + +
Sbjct: 223 GCLAEGEAVLRALPSLTIVSFNTTIAGRTQNGDSEGALEYFSMMRGVEVAPDVVTFVSAI 282
Query: 132 SWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKD 191
S + L Q ++ ++ KA K V S++ + G + + V+D D
Sbjct: 283 SCCSDLAALAQGQQVH--AQVIKAGVDKVVPVITSLVHMYSRCGCLGDSERVYDGYCGLD 340
Query: 192 DATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHA 251
S MI G + ++LF M G N + +++L C+ D G +
Sbjct: 341 LFLLSAMISACGFHGQGHKAVELFKQMMNGGAEPNEVTFLALLYACSHSGLKDEGLEFFE 400
Query: 252 QLVRCQ-FDVDVYVASVLITMYIKCGELVKGK-LIFDNFASKDIVMWNSIISG 302
+ + F V + ++ + + G L + + LI D V+W +++S
Sbjct: 401 LMTKTYGFQPSVKHYNCIVDLLGRSGCLDEAEALILSMPVRADGVIWKTLLSA 453
>gi|347954534|gb|AEP33767.1| organelle transcript processing 82, partial [Matthiola incana]
Length = 694
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 239/647 (36%), Positives = 374/647 (57%), Gaps = 54/647 (8%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARR-- 58
+ E N++ W M RG+ A L+ M ++ + ++ R+
Sbjct: 49 IQEPNLLIWNTMFRGHALSSDPVSALKLYLVMISLGLLPDSYTFPFLLKSCAKSKIRKEG 108
Query: 59 ------LFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+ + + D+ T+++ Y Q+GR+++ R++FD ++V+S+T +I+GYV+
Sbjct: 109 QQIHGHVLKLGFDLDIYVHTSLISMYAQNGRLEDARKVFDISSHRDVVSYTALIAGYVSR 168
Query: 113 NRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAM-----------PMKSV 161
I+ A+KLF+ +P K+ VSW AM+ GY + G ++A ELFK M M +V
Sbjct: 169 GYIESAQKLFDEIPGKDVVSWNAMISGYVETGNYKEALELFKEMMMMTNVRPDESTMVTV 228
Query: 162 VAS-----------------------------NSMILGLGQNGEVQKARVVFDQMREKDD 192
V++ N++I + GEV+ A +FD + KD
Sbjct: 229 VSACAQSDSIELGRHVHSWINDHGFASNLKIVNALIDLYSKFGEVETACELFDGLWNKDV 288
Query: 193 ATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQ 252
+W+ +I Y E + LF M + G N +++S+L CA L ++D GR +H
Sbjct: 289 ISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVY 348
Query: 253 LVRCQFDVDVYVASV---LITMYIKCGELVKGKLIFDN-FASKDIVMWNSIISGYAQYGL 308
+ + V V+S+ LI MY KCG++ + +FD+ +++ + WN++ISG+A +G
Sbjct: 349 INKKLKGVVTNVSSLQTSLIDMYAKCGDIDAAQQVFDSSMSNRSLSTWNAMISGFAMHGR 408
Query: 309 GEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYA 368
+ +F M +G+ PDD+T VG+LSACS++G + GR IF SM Y + PK EHY
Sbjct: 409 ANAAFDIFSRMRMNGIEPDDITFVGLLSACSHSGMLDLGRNIFRSMTRGYEITPKLEHYG 468
Query: 369 CMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPK 428
CM+DLLG +G ++A ++I MP EPD +IW SLL AC+ H L+L E AKKL+++EP
Sbjct: 469 CMIDLLGHSGLFKEAEEMINTMPMEPDGVIWCSLLKACKIHGNLELGESFAKKLIKIEPG 528
Query: 429 NAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKP-PGCSWIEVEKKVHMFTGRDCVSH 487
N+G Y+LLSNIYA+ GR+++VA++R + + + K PGCS IE++ VH F D + H
Sbjct: 529 NSGSYVLLSNIYAAAGRWNEVAKIRALLNDKGMKKKVPGCSSIEIDSVVHEFIIGDKL-H 587
Query: 488 PEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPE 547
P++ I MLE++ LL EAG+ PD+S VL +++EE + +LR+HSEKLA+A+GL+
Sbjct: 588 PQNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWREGALRHHSEKLAIAFGLISTKP 647
Query: 548 GVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLC 594
G + +MKNLRVC +CH A KLISK+ REII RD RF HF+DG+C
Sbjct: 648 GTKLTIMKNLRVCKNCHEATKLISKIYKREIIARDRTRFXHFRDGVC 694
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 93/368 (25%), Positives = 179/368 (48%), Gaps = 42/368 (11%)
Query: 90 IFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVM------PEKNEVSW---------- 133
+FD + + N++ W TM G+ ++ A KL+ VM P+ +
Sbjct: 45 VFDTIQEPNLLIWNTMFRGHALSSDPVSALKLYLVMISLGLLPDSYTFPFLLKSCAKSKI 104
Query: 134 -----------------------TAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILG 170
T+++ Y Q GR++DA ++F + VV+ ++I G
Sbjct: 105 RKEGQQIHGHVLKLGFDLDIYVHTSLISMYAQNGRLEDARKVFDISSHRDVVSYTALIAG 164
Query: 171 LGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFT-LMQKEGVRVNFPS 229
G ++ A+ +FD++ KD +W+ MI Y G E ++LF +M VR + +
Sbjct: 165 YVSRGYIESAQKLFDEIPGKDVVSWNAMISGYVETGNYKEALELFKEMMMMTNVRPDEST 224
Query: 230 LISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFA 289
+++V+S CA S++ GR VH+ + F ++ + + LI +Y K GE+ +FD
Sbjct: 225 MVTVVSACAQSDSIELGRHVHSWINDHGFASNLKIVNALIDLYSKFGEVETACELFDGLW 284
Query: 290 SKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGR- 348
+KD++ WN++I GY L +++L +F EM SG P+DVT++ +L AC++ G + GR
Sbjct: 285 NKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRW 344
Query: 349 -EIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACR 407
++ + K K +V + ++D+ + G ++ A ++ ++ W +++
Sbjct: 345 IHVYINKKLKGVVTNVSSLQTSLIDMYAKCGDIDAAQQVFDSSMSNRSLSTWNAMISGFA 404
Query: 408 THMKLDLA 415
H + + A
Sbjct: 405 MHGRANAA 412
>gi|356540844|ref|XP_003538894.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 748
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 194/483 (40%), Positives = 306/483 (63%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
+P N VSW M+ G + G + EA LF +MP KNVVSW M+ +++D ++D+A +LF
Sbjct: 230 IPNPNAVSWVTMLCGLAKYGKMAEARELFDRMPSKNVVSWNAMIATYVQDLQVDEAVKLF 289
Query: 61 DMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARK 120
MP KD V+ T ++ GY + G++DE R+++++MP K++ + T ++SG + N RID A +
Sbjct: 290 KKMPHKDSVSWTTIINGYIRVGKLDEARQVYNQMPCKDITAQTALMSGLIQNGRIDEADQ 349
Query: 121 LFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKA 180
+F + + V W +M+ GY++ GR+ +A LF+ MP+K+ V+ N+MI G Q G++ +A
Sbjct: 350 MFSRIGAHDVVCWNSMIAGYSRSGRMDEALNLFRQMPIKNSVSWNTMISGYAQAGQMDRA 409
Query: 181 RVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASL 240
+F MREK+ +W+ +I + + L+ + +M KEG + + + LS CA+L
Sbjct: 410 TEIFQAMREKNIVSWNSLIAGFLQNNLYLDALKSLVMMGKEGKKPDQSTFACTLSACANL 469
Query: 241 ASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSII 300
A+L G Q+H +++ + D++V + LI MY KCG + + +F + D++ WNS+I
Sbjct: 470 AALQVGNQLHEYILKSGYMNDLFVGNALIAMYAKCGRVQSAEQVFRDIECVDLISWNSLI 529
Query: 301 SGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLV 360
SGYA G K+ K F +M S V+PD+VT +G+LSACS+ G +G +IF+ M + +
Sbjct: 530 SGYALNGYANKAFKAFEQMSSERVVPDEVTFIGMLSACSHAGLANQGLDIFKCMIEDFAI 589
Query: 361 EPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAK 420
EP EHY+C+VDLLGR G++E+A + M + +A +WGSLLGACR H L+L AA+
Sbjct: 590 EPLAEHYSCLVDLLGRVGRLEEAFNTVRGMKVKANAGLWGSLLGACRVHKNLELGRFAAE 649
Query: 421 KLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFT 480
+L +LEP NA YI LSN++A GR+ +V +R MR + K PGCSWIEV+ ++ F
Sbjct: 650 RLFELEPHNASNYITLSNMHAEAGRWEEVERVRMLMRGKRAGKQPGCSWIEVQNQIQHFL 709
Query: 481 GRD 483
D
Sbjct: 710 SHD 712
Score = 224 bits (572), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 123/411 (29%), Positives = 229/411 (55%), Gaps = 23/411 (5%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
M RN+VSW M+ GY+ M+ EA LF MPE++ SW +M+ + R +++ AR L
Sbjct: 74 MSLRNLVSWNTMIAGYLHNNMVEEASELFDVMPERDNFSWALMITCYTRKGKLEKARELL 133
Query: 61 DMMPEK-DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVAR 119
+++P+K D M+ GY + G+ ++ +++F++MP K+++S+ +M++GY N ++ +A
Sbjct: 134 ELVPDKLDTACWNAMIAGYAKKGQFNDAKKVFEQMPAKDLVSYNSMLAGYTQNGKMHLAL 193
Query: 120 KLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQK 179
+ FE M E+N VSW M+ GY + G + AW+LF+ +P + V+ +M+ GL + G++ +
Sbjct: 194 QFFESMTERNVVSWNLMVAGYVKSGDLSSAWQLFEKIPNPNAVSWVTMLCGLAKYGKMAE 253
Query: 180 ARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLM-QKEGVRVNFPSLISVLSVCA 238
AR +FD+M K+ +W+ MI Y + E + LF M K+ V S ++++
Sbjct: 254 ARELFDRMPSKNVVSWNAMIATYVQDLQVDEAVKLFKKMPHKDSV-----SWTTIINGYI 308
Query: 239 SLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNS 298
+ LD RQV+ Q+ C+ D+ + L++ I+ G + + +F + D+V WNS
Sbjct: 309 RVGKLDEARQVYNQM-PCK---DITAQTALMSGLIQNGRIDEADQMFSRIGAHDVVCWNS 364
Query: 299 IISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKY 358
+I+GY++ G +++L +F +M + + V+ ++S + G++ EIF++M+ K
Sbjct: 365 MIAGYSRSGRMDEALNLFRQM----PIKNSVSWNTMISGYAQAGQMDRATEIFQAMREKN 420
Query: 359 LVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFE---PDAIIWGSLLGAC 406
+V + ++ + DA+K + M E PD + L AC
Sbjct: 421 IVS-----WNSLIAGFLQNNLYLDALKSLVMMGKEGKKPDQSTFACTLSAC 466
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 123/405 (30%), Positives = 206/405 (50%), Gaps = 45/405 (11%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MP +++VS+ +M+ GY + G + A F M E+NVVSW +M+ G+++ + A +LF
Sbjct: 168 MPAKDLVSYNSMLAGYTQNGKMHLALQFFESMTERNVVSWNLMVAGYVKSGDLSSAWQLF 227
Query: 61 DMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARK 120
+ +P + V+ M+ G + G++ E RE+FD MP KNV+SW MI+ YV + ++D A K
Sbjct: 228 EKIPNPNAVSWVTMLCGLAKYGKMAEARELFDRMPSKNVVSWNAMIATYVQDLQVDEAVK 287
Query: 121 LFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKA 180
LF+ MP K+ VSWT ++ GY + G++ +A +++ MP K + A +++ GL QNG + +A
Sbjct: 288 LFKKMPHKDSVSWTTIINGYIRVGKLDEARQVYNQMPCKDITAQTALMSGLIQNGRIDEA 347
Query: 181 RVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQ-KEGVRVNFPSLISVLSVCAS 239
+F ++ D W+ MI Y R G E ++LF M K V N
Sbjct: 348 DQMFSRIGAHDVVCWNSMIAGYSRSGRMDEALNLFRQMPIKNSVSWN------------- 394
Query: 240 LASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSI 299
+I+ Y + G++ + IF K+IV WNS+
Sbjct: 395 ---------------------------TMISGYAQAGQMDRATEIFQAMREKNIVSWNSL 427
Query: 300 ISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFES-MKSKY 358
I+G+ Q L +LK M G PD T LSAC+ ++ G ++ E +KS Y
Sbjct: 428 IAGFLQNNLYLDALKSLVMMGKEGKKPDQSTFACTLSACANLAALQVGNQLHEYILKSGY 487
Query: 359 LVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
+ + + ++ + + G+V+ A ++ + D I W SL+
Sbjct: 488 MNDLFVGN--ALIAMYAKCGRVQSAEQVFRDIEC-VDLISWNSLI 529
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 118/444 (26%), Positives = 225/444 (50%), Gaps = 53/444 (11%)
Query: 20 GMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYC 79
G + EA +F+ M KN+V++ M+ +++RI DAR+LFD M +++V+ M+ GY
Sbjct: 31 GKVEEAIRIFFNMTHKNLVTYNSMISVLAKNARIRDARQLFDQMSLRNLVSWNTMIAGYL 90
Query: 80 QDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEK-NEVSWTAMLM 138
+ V+E E+FD MP+++ SW MI+ Y +++ AR+L E++P+K + W AM+
Sbjct: 91 HNNMVEEASELFDVMPERDNFSWALMITCYTRKGKLEKARELLELVPDKLDTACWNAMIA 150
Query: 139 GYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGM 198
GY + G+ DA ++F+ MP K +V+ NSM+ G QNG++ A F+ M E++ +W+ M
Sbjct: 151 GYAKKGQFNDAKKVFEQMPAKDLVSYNSMLAGYTQNGKMHLALQFFESMTERNVVSWNLM 210
Query: 199 IKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQF 258
+ Y + G LF ++ P+ +S +++ LA
Sbjct: 211 VAGYVKSGDLSSAWQLFE-------KIPNPNAVSWVTMLCGLA----------------- 246
Query: 259 DVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHE 318
K G++ + + +FD SK++V WN++I+ Y Q ++++K+F +
Sbjct: 247 ---------------KYGKMAEARELFDRMPSKNVVSWNAMIATYVQDLQVDEAVKLFKK 291
Query: 319 MFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAG 378
M D V+ +++ GK+ E R+++ M K + T A M L+ + G
Sbjct: 292 M----PHKDSVSWTTIINGYIRVGKLDEARQVYNQMPCKDI----TAQTALMSGLI-QNG 342
Query: 379 QVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSN 438
++++A ++ + D + W S++ ++D A Q+ KN+ + + +
Sbjct: 343 RIDEADQMFSRIGAH-DVVCWNSMIAGYSRSGRMD---EALNLFRQMPIKNSVSWNTMIS 398
Query: 439 IYASQGRFHDVAELRKNMRKRNVI 462
YA G+ E+ + MR++N++
Sbjct: 399 GYAQAGQMDRATEIFQAMREKNIV 422
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 143/318 (44%), Gaps = 33/318 (10%)
Query: 159 KSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLM 218
K N I+ LG+ G+V++A +F M K+ T++ MI V + + LF M
Sbjct: 15 KHAFNHNRQIIQLGKLGKVEEAIRIFFNMTHKNLVTYNSMISVLAKNARIRDARQLFDQM 74
Query: 219 QKEGVRVNFPSLISVLSVCASLASLDHGRQVH--AQLVRCQFDVDVYVASVLITMYIKCG 276
SL +++S +A H V ++L + D + +++IT Y + G
Sbjct: 75 ----------SLRNLVSWNTMIAGYLHNNMVEEASELFDVMPERDNFSWALMITCYTRKG 124
Query: 277 ELVKGKLIFDNFASK-DIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVL 335
+L K + + + K D WN++I+GYA+ G + KVF +M + D V+ +L
Sbjct: 125 KLEKARELLELVPDKLDTACWNAMIAGYAKKGQFNDAKKVFEQMPA----KDLVSYNSML 180
Query: 336 SACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPD 395
+ + GK+ + FESM + +V + MV ++G + A +L E +P P+
Sbjct: 181 AGYTQNGKMHLALQFFESMTERNVVS-----WNLMVAGYVKSGDLSSAWQLFEKIP-NPN 234
Query: 396 AIIWGSLLGACRTHMKLDLAEVAAKKLLQLEP-KNAGPYILLSNIYASQGRFHDVAELRK 454
A+ W ++L + K+ A++L P KN + + Y + + +L K
Sbjct: 235 AVSWVTMLCGLAKYGKM----AEARELFDRMPSKNVVSWNAMIATYVQDLQVDEAVKLFK 290
Query: 455 NMRKRNVIKPPGCSWIEV 472
M ++ + SW +
Sbjct: 291 KMPHKDSV-----SWTTI 303
>gi|449455172|ref|XP_004145327.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449474033|ref|XP_004154055.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449510921|ref|XP_004163811.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
Length = 649
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 226/610 (37%), Positives = 350/610 (57%), Gaps = 25/610 (4%)
Query: 12 MVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDA----RRLFDMMPEKD 67
+++ ++G + +A L + +++ R + + DA + L D ++D
Sbjct: 44 LIQSLCKQGNLKQALYLLSHESNPTQQTCELLILSAARRNSLSDALDVHQLLVDGGFDQD 103
Query: 68 VVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPE 127
T ++ + + VD R++FD+ K+ + W + R + E+ P
Sbjct: 104 PFLATKLINMFSELDTVDNARKVFDKTRKRTIYVWNALFRALALAGR---GNDVLELYPR 160
Query: 128 KNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSV-VASNSMILGLGQN------------ 174
N + ++ YT + A E + K + ++ + G G +
Sbjct: 161 MNMMGVSSDRFTYTYLLKACVASECLVSFLQKGKEIHAHILRHGYGAHVHVMTTLMDMYA 220
Query: 175 --GEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLF--TLMQKEGVRVNFPSL 230
G V A VFD+M K+ +WS MI Y + G E ++LF ++ N ++
Sbjct: 221 RFGCVSYASAVFDEMPVKNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDSVPNSVTM 280
Query: 231 ISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFAS 290
+SVL CA+ A+L+ G+ +HA ++R D + V S LITMY +CG+L G+LIFD
Sbjct: 281 VSVLQACAAFAALEQGKLIHAYILRRGLDSILPVISALITMYARCGKLESGQLIFDRMHK 340
Query: 291 KDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREI 350
KD+V+WNS+IS Y +G G K++K+F EM G P ++ + VL ACS+TG V+EG+++
Sbjct: 341 KDVVLWNSLISSYGLHGYGRKAIKIFEEMIDHGFSPSHISFISVLGACSHTGLVEEGKKL 400
Query: 351 FESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHM 410
FESM ++ ++P EHYACMVDLLGRA ++++A K+IE + EP +WGSLLGACR H
Sbjct: 401 FESMVKEHGIQPSVEHYACMVDLLGRANRLDEAAKIIEDLRIEPGPKVWGSLLGACRIHC 460
Query: 411 KLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWI 470
++LAE A+K+L +LEP NAG Y+LL++IYA + +V ++K + R + K PG SWI
Sbjct: 461 HVELAERASKRLFKLEPTNAGNYVLLADIYAEAEMWDEVKRVKKLLDSRELQKVPGRSWI 520
Query: 471 EVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLR 530
EV +K++ FT D + P+ + +L + +++ GY P + VL+D+D+EEK +
Sbjct: 521 EVRRKIYSFTSVDEFN-PQGEQLHALLVNLSNEMKQRGYTPQTKLVLYDLDQEEKERIVL 579
Query: 531 YHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFK 590
HSEKLAVA+GL+ +G IR+ KNLR+C DCHS K ISK REI++RD NRFHHFK
Sbjct: 580 GHSEKLAVAFGLINTSKGDTIRITKNLRLCEDCHSVTKFISKFADREIMVRDLNRFHHFK 639
Query: 591 DGLCSCRDYW 600
DG+CSC DYW
Sbjct: 640 DGVCSCGDYW 649
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 106/219 (48%), Gaps = 20/219 (9%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM------PEKNVVSWTVMLGGFIRDSRID 54
MP +NVVSW+AM+ Y + G EA LF +M N V+ +L + ++
Sbjct: 235 MPVKNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDSVPNSVTMVSVLQACAAFAALE 294
Query: 55 DARRLFDMMPEKDVVA----QTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYV 110
+ + + + + + + ++ Y + G+++ G+ IFD M KK+V+ W ++IS Y
Sbjct: 295 QGKLIHAYILRRGLDSILPVISALITMYARCGKLESGQLIFDRMHKKDVVLWNSLISSYG 354
Query: 111 NNNRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAMPMK-----SV 161
+ A K+FE M + + +S+ ++L + G +++ +LF++M + SV
Sbjct: 355 LHGYGRKAIKIFEEMIDHGFSPSHISFISVLGACSHTGLVEEGKKLFESMVKEHGIQPSV 414
Query: 162 VASNSMILGLGQNGEVQKARVVFDQMR-EKDDATWSGMI 199
M+ LG+ + +A + + +R E W ++
Sbjct: 415 EHYACMVDLLGRANRLDEAAKIIEDLRIEPGPKVWGSLL 453
>gi|21741755|emb|CAD39781.1| OSJNBa0060B20.9 [Oryza sativa Japonica Group]
Length = 897
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 241/705 (34%), Positives = 377/705 (53%), Gaps = 108/705 (15%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEK---NVVSWTVMLGGFIRDSRIDDARRL 59
E NV A+V Y G + EA +F ++ ++ +V+SW ++ ++ S A L
Sbjct: 194 ESNVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDL 253
Query: 60 FDMM-------------------------------PEK--------------DVVAQTNM 74
F M P+ DV +
Sbjct: 254 FSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNAL 313
Query: 75 VLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKN----E 130
+ Y + G ++ ++F+ M K+V+SW M++GY + + A +LF+ M ++N
Sbjct: 314 IDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDV 373
Query: 131 VSWTAMLMGYTQCGRIQDAWELFKAM----------PMKSVVASNSMILGLGQNGEV--- 177
V+WTA++ GY+Q G +A LF+ M + SV+++ + + Q E+
Sbjct: 374 VTWTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAY 433
Query: 178 ------------------------------------QKARVVFDQ--MREKDDATWSGMI 199
+ AR +FD + E++ TW+ MI
Sbjct: 434 SLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMI 493
Query: 200 KVYERKGYELEVIDLFTLMQKE--GVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRC- 256
+ + G + + LF M E GV N ++ +L CA LA++ G+Q+HA ++R
Sbjct: 494 GGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHH 553
Query: 257 QFDVDVY-VASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKV 315
+++ Y VA+ LI MY KCG++ + +FD+ + K + W S+++GY +G G ++L +
Sbjct: 554 RYESSAYFVANCLIDMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDI 613
Query: 316 FHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLG 375
F +M +G +PDD+T + VL ACS+ G V +G F+SM + Y + P+ EHYAC +DLL
Sbjct: 614 FDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYACAIDLLA 673
Query: 376 RAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYIL 435
R+G+++ A + ++ MP EP A++W +LL ACR H ++LAE A KL+++ +N G Y L
Sbjct: 674 RSGRLDKAWRTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSYTL 733
Query: 436 LSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMR 495
+SNIYA+ GR+ DVA +R M+K + K PGCSW++ +K F D SHP P I
Sbjct: 734 ISNIYATAGRWKDVARIRHLMKKSGIKKRPGCSWVQGQKGTASFFVGD-RSHPLSPQIYA 792
Query: 496 MLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMK 555
+LE + ++ GY P+++F LHDVDEEEK + L HSEKLA+AYGL+ G PIR+ K
Sbjct: 793 LLESLIDRIKAMGYVPETNFALHDVDEEEKNNLLVEHSEKLALAYGLLTTSPGCPIRITK 852
Query: 556 NLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
NLRVCGDCHSA ISK++ EI++RD +RFHHFK+G CSC YW
Sbjct: 853 NLRVCGDCHSAFTYISKIVDHEIVVRDPSRFHHFKNGSCSCGGYW 897
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 91/425 (21%), Positives = 177/425 (41%), Gaps = 67/425 (15%)
Query: 72 TNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVM------ 125
T +V Y G D + + + + W +I ++ R+D A + M
Sbjct: 100 TGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTR 159
Query: 126 PEKNEVSWTAMLMGYTQCGRIQDAWE-LFKAMPMKS-VVASNSMILGLGQNGEVQKARVV 183
P+ + G R A+ L +S V N+++ + G +++A ++
Sbjct: 160 PDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMI 219
Query: 184 FDQMREK---DDATWSGMIKVYERKGYELEVIDLFTLM------QKEGVRVNFPSLISVL 234
FD++ ++ D +W+ ++ + + +DLF+ M + R + S++++L
Sbjct: 220 FDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNIL 279
Query: 235 SVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIV 294
C SL ++ ++VH +R DV+V + LI Y KCG + +F+ KD+V
Sbjct: 280 PACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVV 339
Query: 295 MWNS-----------------------------------IISGYAQYGLGEKSLKVFHEM 319
WN+ +I+GY+Q G ++L +F +M
Sbjct: 340 SWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQM 399
Query: 320 FSSGVMPDDVTLVGVLSACSYTGKVKEGREIFE-SMKSKYLV--------EPKTEHYACM 370
SG +P+ VT++ VLSAC+ G +G EI S+K+ L + Y +
Sbjct: 400 IFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNAL 459
Query: 371 VDLLGRAGQVEDAMKLIEAMPFEP-DAIIWGSLLGACRTHMKLDLAEVAAKKLLQL--EP 427
+D+ + + A + + +P E + + W ++G H + + A K +++ EP
Sbjct: 460 IDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGG---HAQYGDSNDALKLFVEMISEP 516
Query: 428 KNAGP 432
P
Sbjct: 517 YGVAP 521
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 124/313 (39%), Gaps = 67/313 (21%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKN----VVSWTVMLGGFIRDSRIDDA 56
M ++VVSW AMV GY + G A LF M ++N VV+WT ++ G+ + +A
Sbjct: 333 MEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEA 392
Query: 57 RRLFDMMPEKDVVAQTNM---VLGYCQD-GRVDEGREIFDEMPKKNVIS----------- 101
LF M + VL C G +G EI K +++
Sbjct: 393 LNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDED 452
Query: 102 ---WTTMISGYVNNNRIDVARKLFEVMP--EKNEVSWTAMLMGYTQCGRIQDAWELFKAM 156
+ +I Y AR +F+ +P E+N V+WT M+ G+ Q G DA +LF M
Sbjct: 453 LMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEM 512
Query: 157 --------PMKSVVA-----------------------------------SNSMILGLGQ 173
P ++ +N +I +
Sbjct: 513 ISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSK 572
Query: 174 NGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISV 233
G+V AR VFD M +K +W+ M+ Y G E +D+F M+K G + + + V
Sbjct: 573 CGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVV 632
Query: 234 LSVCASLASLDHG 246
L C+ +D G
Sbjct: 633 LYACSHCGMVDQG 645
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 75/164 (45%), Gaps = 19/164 (11%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVV----SWTVMLGGFIRDSRIDDA 56
M +++ +SWT+M+ GY G +EA +F +M + V ++ V+L +D
Sbjct: 586 MSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQG 645
Query: 57 RRLFDMM-------PEKDVVAQTNMVLGYCQDGRVDEGREIFDEMP-KKNVISWTTMISG 108
FD M P + A +L + GR+D+ +MP + + W ++S
Sbjct: 646 LSYFDSMSADYGLTPRAEHYACAIDLLA--RSGRLDKAWRTVKDMPMEPTAVVWVALLSA 703
Query: 109 YVNNNRIDVA----RKLFEVMPEKNEVSWTAMLMGYTQCGRIQD 148
++ +++A KL E M +N+ S+T + Y GR +D
Sbjct: 704 CRVHSNVELAEHALNKLVE-MNAENDGSYTLISNIYATAGRWKD 746
>gi|356542011|ref|XP_003539465.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Glycine max]
Length = 876
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 228/617 (36%), Positives = 354/617 (57%), Gaps = 21/617 (3%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDS--------- 51
M ++ VSW +M+ G+V G EA F M I+
Sbjct: 264 MENKDSVSWNSMIAGHVINGQDLEAFETFNNMQLAGAKPTHATFASVIKSCASLKELGLV 323
Query: 52 RIDDARRLFD-MMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPK-KNVISWTTMISGY 109
R+ + L + ++V+ + L C++ +D+ +F M ++V+SWT MISGY
Sbjct: 324 RVLHCKTLKSGLSTNQNVLTALMVALTKCKE--IDDAFSLFSLMHGVQSVVSWTAMISGY 381
Query: 110 VNNNRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASN 165
+ N D A LF +M + N +++ +L + E+ K KS
Sbjct: 382 LQNGDTDQAVNLFSLMRREGVKPNHFTYSTILTVQHAVFISEIHAEVIKTNYEKSSSVGT 441
Query: 166 SMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRV 225
+++ + G + A VF+ + KD WS M+ Y + G E +F + +EG++
Sbjct: 442 ALLDAFVKIGNISDAVKVFELIETKDVIAWSAMLAGYAQAGETEEAAKIFHQLTREGIKP 501
Query: 226 NFPSLISVLSVC-ASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLI 284
N + S+++ C A AS++ G+Q HA ++ + + + V+S L+T+Y K G + I
Sbjct: 502 NEFTFCSIINACTAPTASVEQGKQFHAYAIKLRLNNALCVSSSLVTLYAKRGNIESAHEI 561
Query: 285 FDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKV 344
F +D+V WNS+ISGYAQ+G +K+L+VF EM + D +T +GV+SAC++ G V
Sbjct: 562 FKRQKERDLVSWNSMISGYAQHGQAKKALEVFEEMQKRNLEVDAITFIGVISACAHAGLV 621
Query: 345 KEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLG 404
+G+ F M + + + P EHY+CM+DL RAG + AM +I MPF P A +W +L
Sbjct: 622 GKGQNYFNIMINDHHINPTMEHYSCMIDLYSRAGMLGKAMDIINGMPFPPAATVWRIVLA 681
Query: 405 ACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKP 464
A R H ++L ++AA+K++ LEP+++ Y+LLSNIYA+ G +H+ +RK M KR V K
Sbjct: 682 ASRVHRNIELGKLAAEKIISLEPQHSAAYVLLSNIYAAAGNWHEKVNVRKLMDKRRVKKE 741
Query: 465 PGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEE 524
PG SWIEV+ K + F D +SHP I L ++ LR+ GY PD+++V HD+++E+
Sbjct: 742 PGYSWIEVKNKTYSFLAGD-LSHPLSDHIYSKLSELNTRLRDVGYQPDTNYVFHDIEDEQ 800
Query: 525 KVHSLRYHSEKLAVAYGLV-KLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDA 583
K L +HSE+LA+A+GL+ LPE +P++++KNLRVCGDCHS IKL+S V R I++RD+
Sbjct: 801 KETILSHHSERLAIAFGLIATLPE-IPLQIVKNLRVCGDCHSFIKLVSLVEKRYIVVRDS 859
Query: 584 NRFHHFKDGLCSCRDYW 600
NRFHHFK GLCSC DYW
Sbjct: 860 NRFHHFKGGLCSCGDYW 876
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 100/447 (22%), Positives = 203/447 (45%), Gaps = 94/447 (21%)
Query: 47 FIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMP----KKNVISW 102
+ + + D RR+FD M ++DVV+ +++ GY + D+ E+F M + + +
Sbjct: 147 YTKTGNVRDGRRVFDEMGDRDVVSWNSLLTGYSWNRFNDQVWELFCLMQVEGYRPDYYTV 206
Query: 103 TTMISGYVNNNRIDV-----------------------------------ARKLFEVMPE 127
+T+I+ N + + AR +F+ M
Sbjct: 207 STVIAALANQGAVAIGMQIHALVVKLGFETERLVCNSLISMLSKSGMLRDARVVFDNMEN 266
Query: 128 KNEVSWTAMLMGYTQCGRIQDAWELFKAM------PMKSVVAS----------------- 164
K+ VSW +M+ G+ G+ +A+E F M P + AS
Sbjct: 267 KDSVSWNSMIAGHVINGQDLEAFETFNNMQLAGAKPTHATFASVIKSCASLKELGLVRVL 326
Query: 165 --NSMILGLGQNGEVQKA-RVVFDQMREKDDA--------------TWSGMIKVYERKGY 207
++ GL N V A V + +E DDA +W+ MI Y + G
Sbjct: 327 HCKTLKSGLSTNQNVLTALMVALTKCKEIDDAFSLFSLMHGVQSVVSWTAMISGYLQNGD 386
Query: 208 ELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASV 267
+ ++LF+LM++EGV+ N + ++L+V ++ ++HA++++ ++ V +
Sbjct: 387 TDQAVNLFSLMRREGVKPNHFTYSTILTVQHAVFI----SEIHAEVIKTNYEKSSSVGTA 442
Query: 268 LITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPD 327
L+ ++K G + +F+ +KD++ W+++++GYAQ G E++ K+FH++ G+ P+
Sbjct: 443 LLDAFVKIGNISDAVKVFELIETKDVIAWSAMLAGYAQAGETEEAAKIFHQLTREGIKPN 502
Query: 328 DVTLVGVLSACSY-TGKVKEGREIFESMKSKYLVEPKTEHYAC----MVDLLGRAGQVED 382
+ T +++AC+ T V++G++ Y ++ + + C +V L + G +E
Sbjct: 503 EFTFCSIINACTAPTASVEQGKQF-----HAYAIKLRLNNALCVSSSLVTLYAKRGNIES 557
Query: 383 AMKLIEAMPFEPDAIIWGSLLGACRTH 409
A ++ + E D + W S++ H
Sbjct: 558 AHEIFKRQK-ERDLVSWNSMISGYAQH 583
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 101/367 (27%), Positives = 173/367 (47%), Gaps = 24/367 (6%)
Query: 78 YCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVM------PEKNEV 131
Y + G V +GR +FDEM ++V+SW ++++GY N D +LF +M P+ V
Sbjct: 147 YTKTGNVRDGRRVFDEMGDRDVVSWNSLLTGYSWNRFNDQVWELFCLMQVEGYRPDYYTV 206
Query: 132 SWTAMLMGYTQCGRIQDAWELFKAMPMK-----SVVASNSMILGLGQNGEVQKARVVFDQ 186
S ++ G + ++ A+ +K + NS+I L ++G ++ ARVVFD
Sbjct: 207 S--TVIAALANQGAVAIGMQI-HALVVKLGFETERLVCNSLISMLSKSGMLRDARVVFDN 263
Query: 187 MREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHG 246
M KD +W+ MI + G +LE + F MQ G + + SV+ CASL L
Sbjct: 264 MENKDSVSWNSMIAGHVINGQDLEAFETFNNMQLAGAKPTHATFASVIKSCASLKELGLV 323
Query: 247 RQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFD-NFASKDIVMWNSIISGYAQ 305
R +H + ++ + V + L+ KC E+ +F + +V W ++ISGY Q
Sbjct: 324 RVLHCKTLKSGLSTNQNVLTALMVALTKCKEIDDAFSLFSLMHGVQSVVSWTAMISGYLQ 383
Query: 306 YGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTE 365
G ++++ +F M GV P+ T +L+ + + E E +K+ Y E +
Sbjct: 384 NGDTDQAVNLFSLMRREGVKPNHFTYSTILTV-QHAVFISEIHA--EVIKTNY--EKSSS 438
Query: 366 HYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQL 425
++D + G + DA+K+ E + D I W ++L + + E AAK QL
Sbjct: 439 VGTALLDAFVKIGNISDAVKVFELIE-TKDVIAWSAMLAG---YAQAGETEEAAKIFHQL 494
Query: 426 EPKNAGP 432
+ P
Sbjct: 495 TREGIKP 501
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/361 (23%), Positives = 164/361 (45%), Gaps = 28/361 (7%)
Query: 47 FIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMI 106
+RDS A++LFD P +D+ ++ Y + + E +F + +
Sbjct: 46 LLRDSDPRFAQQLFDQTPLRDLKQHNQLLFRYSRCDQTQEALHLFVSLYR---------- 95
Query: 107 SGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRI--QDAWELFKAMPMKSVVAS 164
SG + P+ +S + + G + Q + K + +
Sbjct: 96 SG---------------LSPDSYTMSCVLSVCAGSFNGTVGEQVHCQCVKCGLVHHLSVG 140
Query: 165 NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVR 224
NS++ + G V+ R VFD+M ++D +W+ ++ Y + +V +LF LMQ EG R
Sbjct: 141 NSLVDMYTKTGNVRDGRRVFDEMGDRDVVSWNSLLTGYSWNRFNDQVWELFCLMQVEGYR 200
Query: 225 VNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLI 284
++ ++ +V++ A+ ++ G Q+HA +V+ F+ + V + LI+M K G L +++
Sbjct: 201 PDYYTVSTVIAALANQGAVAIGMQIHALVVKLGFETERLVCNSLISMLSKSGMLRDARVV 260
Query: 285 FDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKV 344
FDN +KD V WNS+I+G+ G ++ + F+ M +G P T V+ +C+ ++
Sbjct: 261 FDNMENKDSVSWNSMIAGHVINGQDLEAFETFNNMQLAGAKPTHATFASVIKSCASLKEL 320
Query: 345 KEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLG 404
R + L + A MV L + +++DA L M + W +++
Sbjct: 321 GLVRVLHCKTLKSGLSTNQNVLTALMV-ALTKCKEIDDAFSLFSLMHGVQSVVSWTAMIS 379
Query: 405 A 405
Sbjct: 380 G 380
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 125/247 (50%), Gaps = 8/247 (3%)
Query: 161 VVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQK 220
VVA N+ L ++ + + A+ +FDQ +D + ++ Y R E + LF + +
Sbjct: 38 VVALNARTLL--RDSDPRFAQQLFDQTPLRDLKQHNQLLFRYSRCDQTQEALHLFVSLYR 95
Query: 221 EGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVK 280
G+ + ++ VLSVCA + G QVH Q V+C + V + L+ MY K G +
Sbjct: 96 SGLSPDSYTMSCVLSVCAGSFNGTVGEQVHCQCVKCGLVHHLSVGNSLVDMYTKTGNVRD 155
Query: 281 GKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSY 340
G+ +FD +D+V WNS+++GY+ ++ ++F M G PD T+ V++A +
Sbjct: 156 GRRVFDEMGDRDVVSWNSLLTGYSWNRFNDQVWELFCLMQVEGYRPDYYTVSTVIAALAN 215
Query: 341 TGKVKEGREIFESMKSKYLVEPKTEHYAC--MVDLLGRAGQVEDAMKLIEAMPFEPDAII 398
G V G +I ++ K E TE C ++ +L ++G + DA + + M D++
Sbjct: 216 QGAVAIGMQI-HALVVKLGFE--TERLVCNSLISMLSKSGMLRDARVVFDNME-NKDSVS 271
Query: 399 WGSLLGA 405
W S++
Sbjct: 272 WNSMIAG 278
>gi|297810761|ref|XP_002873264.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319101|gb|EFH49523.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 624
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 208/461 (45%), Positives = 300/461 (65%)
Query: 140 YTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMI 199
Y CG I A +F MP + VV+ SM+ G + G V+ AR +FD+M ++ TWS MI
Sbjct: 164 YANCGLIAAAGRIFGQMPFRDVVSWTSMVAGYCKCGMVEDAREMFDEMPHRNLFTWSIMI 223
Query: 200 KVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFD 259
Y + + IDLF LM++EGV N ++SV+S CA L +L+ G + H +V+
Sbjct: 224 NGYAKNNCFEKAIDLFELMKREGVVANETVMVSVISSCAHLGALEFGERAHEYVVKSHMT 283
Query: 260 VDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEM 319
V++ + + L+ MY +CGE+ K +F+ KD + W+SII G A +G K++ F +M
Sbjct: 284 VNLILGTALVDMYWRCGEIEKAIRVFEELPDKDSLSWSSIIKGLAVHGHAHKAIHYFSQM 343
Query: 320 FSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQ 379
G P D+TL VLSACS+ G V +G EI+E+MK Y +EP+ EHY C+VD+LGRAG+
Sbjct: 344 VRLGFSPRDITLTAVLSACSHGGLVDKGLEIYENMKRDYGIEPRLEHYGCIVDMLGRAGK 403
Query: 380 VEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNI 439
+ +A I MP +P+A I G+LLGAC+ + ++AE L++++P+++G Y+LLSNI
Sbjct: 404 LAEAENFILKMPVKPNAPILGALLGACKIYKNTEVAERVGNMLIEVKPEHSGYYVLLSNI 463
Query: 440 YASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEK 499
YA G++ + LR M+++ V KPPG S IE++ K++ F+ D HPE I R+ E+
Sbjct: 464 YACAGQWEKLESLRDIMKEKLVKKPPGWSLIEIDGKINKFSMGDDQKHPEMGKIKRLWEE 523
Query: 500 IGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRV 559
I G +R GY ++ DVDEEEK ++ HSEKLA+AYG++K G IR++KNLRV
Sbjct: 524 ILGKIRLIGYKGNTGDAFFDVDEEEKETAIHMHSEKLAIAYGMMKTKTGTTIRIVKNLRV 583
Query: 560 CGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
C DCH+A KLIS+V GRE I+RD NRFHHF++GLCSCRDYW
Sbjct: 584 CEDCHTATKLISEVYGREFIVRDRNRFHHFRNGLCSCRDYW 624
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/213 (35%), Positives = 120/213 (56%), Gaps = 12/213 (5%)
Query: 53 IDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
I A R+F MP +DVV+ T+MV GYC+ G V++ RE+FDEMP +N+ +W+ MI+GY N
Sbjct: 170 IAAAGRIFGQMPFRDVVSWTSMVAGYCKCGMVEDAREMFDEMPHRNLFTWSIMINGYAKN 229
Query: 113 NRIDVARKLFEVMPEKNEVS-WTAMLMGYTQCGRIQDAWELFKAMPMKSVVASN---SMI 168
N + A LFE+M + V+ T M+ + C + A E F + VV S+ ++I
Sbjct: 230 NCFEKAIDLFELMKREGVVANETVMVSVISSCAHL-GALE-FGERAHEYVVKSHMTVNLI 287
Query: 169 LGLG------QNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEG 222
LG + GE++KA VF+++ +KD +WS +IK G+ + I F+ M + G
Sbjct: 288 LGTALVDMYWRCGEIEKAIRVFEELPDKDSLSWSSIIKGLAVHGHAHKAIHYFSQMVRLG 347
Query: 223 VRVNFPSLISVLSVCASLASLDHGRQVHAQLVR 255
+L +VLS C+ +D G +++ + R
Sbjct: 348 FSPRDITLTAVLSACSHGGLVDKGLEIYENMKR 380
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 106/193 (54%), Gaps = 8/193 (4%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDM 62
+ +V ++V Y G+I AG +F QMP ++VVSWT M+ G+ + ++DAR +FD
Sbjct: 151 QNDVYVENSLVHMYANCGLIAAAGRIFGQMPFRDVVSWTSMVAGYCKCGMVEDAREMFDE 210
Query: 63 MPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTT----MISGYVNNNRIDVA 118
MP +++ + M+ GY ++ ++ ++F+ M ++ V++ T +IS + ++
Sbjct: 211 MPHRNLFTWSIMINGYAKNNCFEKAIDLFELMKREGVVANETVMVSVISSCAHLGALEFG 270
Query: 119 RKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQN 174
+ E + + N + TA++ Y +CG I+ A +F+ +P K ++ +S+I GL +
Sbjct: 271 ERAHEYVVKSHMTVNLILGTALVDMYWRCGEIEKAIRVFEELPDKDSLSWSSIIKGLAVH 330
Query: 175 GEVQKARVVFDQM 187
G KA F QM
Sbjct: 331 GHAHKAIHYFSQM 343
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 129/271 (47%), Gaps = 20/271 (7%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MP R+VVSWT+MV GY + GM+ +A +F +MP +N+ +W++M+ G+ +++ + A LF
Sbjct: 180 MPFRDVVSWTSMVAGYCKCGMVEDAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLF 239
Query: 61 DMMPEKDVVAQTNM---VLGYCQD-GRVDEGREIFDEMPKK----NVISWTTMISGYVNN 112
++M + VVA + V+ C G ++ G + + K N+I T ++ Y
Sbjct: 240 ELMKREGVVANETVMVSVISSCAHLGALEFGERAHEYVVKSHMTVNLILGTALVDMYWRC 299
Query: 113 NRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSV----VASNSMI 168
I+ A ++FE +P+K+ +SW++++ G G A F M + +++
Sbjct: 300 GEIEKAIRVFEELPDKDSLSWSSIIKGLAVHGHAHKAIHYFSQMVRLGFSPRDITLTAVL 359
Query: 169 LGLGQNGEVQKARVVFDQMR-----EKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGV 223
G V K +++ M+ E + ++ + R G E + M V
Sbjct: 360 SACSHGGLVDKGLEIYENMKRDYGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMP---V 416
Query: 224 RVNFPSLISVLSVCASLASLDHGRQVHAQLV 254
+ N P L ++L C + + +V L+
Sbjct: 417 KPNAPILGALLGACKIYKNTEVAERVGNMLI 447
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 142/319 (44%), Gaps = 44/319 (13%)
Query: 183 VFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGV---RVNFPSLISVLSVCAS 239
+F Q++ + ++ +I+ + + +T M K + + FP LI
Sbjct: 75 IFSQIQNPNLFVFNVLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKA---STE 131
Query: 240 LASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSI 299
+ + G Q H+Q+VR F DVYV + L+ MY CG + IF +D+V W S+
Sbjct: 132 MECVVVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGLIAAAGRIFGQMPFRDVVSWTSM 191
Query: 300 ISGYAQYGL-------------------------------GEKSLKVFHEMFSSGVMPDD 328
++GY + G+ EK++ +F M GV+ ++
Sbjct: 192 VAGYCKCGMVEDAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFELMKREGVVANE 251
Query: 329 VTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIE 388
+V V+S+C++ G ++ G E + ++ A +VD+ R G++E A+++ E
Sbjct: 252 TVMVSVISSCAHLGALEFGERAHEYVVKSHMTVNLILGTA-LVDMYWRCGEIEKAIRVFE 310
Query: 389 AMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQL--EPKNAGPYILLSNIYASQGRF 446
+P + D++ W S++ H A ++++L P++ +LS S G
Sbjct: 311 ELP-DKDSLSWSSIIKGLAVHGHAHKAIHYFSQMVRLGFSPRDITLTAVLSA--CSHGGL 367
Query: 447 HDVA-ELRKNMRKRNVIKP 464
D E+ +NM++ I+P
Sbjct: 368 VDKGLEIYENMKRDYGIEP 386
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/254 (20%), Positives = 107/254 (42%), Gaps = 28/254 (11%)
Query: 223 VRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLI---------TMYI 273
+R P L ++L C+S + L + +H L+R DV+VAS L+ T +
Sbjct: 9 LRFKHPKL-ALLQSCSSFSDL---KIIHGFLLRTHLISDVFVASRLLALALCVDDSTFHK 64
Query: 274 KCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVG 333
L IF + ++ ++N +I ++ K+ + +M S + PD++T
Sbjct: 65 PTNLLGYAYGIFSQIQNPNLFVFNVLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPF 124
Query: 334 VLSA-----CSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIE 388
++ A C G+ + + ++ VE +V + G + A ++
Sbjct: 125 LIKASTEMECVVVGEQTHSQIVRFGFQNDVYVENS------LVHMYANCGLIAAAGRIFG 178
Query: 389 AMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHD 448
MPF D + W S++ + K + E A + ++ +N + ++ N YA F
Sbjct: 179 QMPFR-DVVSWTSMVAG---YCKCGMVEDAREMFDEMPHRNLFTWSIMINGYAKNNCFEK 234
Query: 449 VAELRKNMRKRNVI 462
+L + M++ V+
Sbjct: 235 AIDLFELMKREGVV 248
>gi|449523792|ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 226/643 (35%), Positives = 359/643 (55%), Gaps = 49/643 (7%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDS------------- 51
NV + T +V Y + I +A +F +MPE+++VSW ++ GF ++
Sbjct: 181 NVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQ 240
Query: 52 ---RIDDARRLFDMMPE-----------------------KDVVAQTNMVLGYCQDGRVD 85
+ D+ L ++P K V T + Y + G V+
Sbjct: 241 DEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVE 300
Query: 86 EGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKN-EVSWTAMLMGYTQCG 144
R IFD M +K V+SW +M+ GYV N + A +FE M E+ + + ++ C
Sbjct: 301 TARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACA 360
Query: 145 RIQD------AWELFKAMPMKSVVAS-NSMILGLGQNGEVQKARVVFDQMREKDDATWSG 197
+ D + + + S ++ NS+I + V A +F+ + + +W+
Sbjct: 361 DLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNA 420
Query: 198 MIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQ 257
MI Y + G E ++ F+ M+ G++ + +++SV+ A L+ H + +H ++R
Sbjct: 421 MILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSC 480
Query: 258 FDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFH 317
D +++V + L+ MY KCG + + +FD + + ++ WN++I GY +GLG +L +F
Sbjct: 481 LDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGRAALDLFD 540
Query: 318 EMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRA 377
+M V P+D+T + V+SACS++G V EG F+SMK Y +EP +HY MVDLLGRA
Sbjct: 541 KMKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRA 600
Query: 378 GQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLS 437
G++++A IE MP P ++G++LGAC+ H +++ E AAKKL +L P G ++LL+
Sbjct: 601 GRIKEAWDFIENMPISPGITVYGAMLGACKIHKNIEVGEKAAKKLFELNPDEGGYHVLLA 660
Query: 438 NIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRML 497
NIYAS ++ VAE+RK M K+ + K PGCS +E+ +VH F +HP+ I L
Sbjct: 661 NIYASTSKWSKVAEVRKTMEKKGLKKTPGCSVVELRNEVHSFYS-GSTTHPQSKRIYAFL 719
Query: 498 EKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNL 557
E++ ++ AGY PD++ +L DV+++ + L HSEKLA+A+GL+ G I V KNL
Sbjct: 720 EELVYEIKAAGYVPDTNLIL-DVEDDVQEQLLNSHSEKLAIAFGLLNTSPGTTIHVRKNL 778
Query: 558 RVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
RVCGDCH+A K IS V GREII+RD RFHHFK+G+CSC DYW
Sbjct: 779 RVCGDCHNATKYISLVTGREIIVRDMQRFHHFKNGICSCGDYW 821
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 107/447 (23%), Positives = 198/447 (44%), Gaps = 80/447 (17%)
Query: 41 TVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVD--------------- 85
T ++ F + I++A R+F+ + +K M+ GY ++ ++
Sbjct: 85 TKLVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLETALAFLCRMRYDDVK 144
Query: 86 --------------------EGREIFDEMPKK----NVISWTTMISGYVNNNRIDVARKL 121
G+EI ++ NV + T +++ Y +ID A K+
Sbjct: 145 PVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKM 204
Query: 122 FEVMPEKNEVSWTAMLMGYTQCG----------RIQDAWELFKAMPMKSVV--ASNSMIL 169
F+ MPE++ VSW ++ G++Q G R+QD + ++ + +V+ A++ +L
Sbjct: 205 FDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLL 264
Query: 170 GLGQN---------------------------GEVQKARVVFDQMREKDDATWSGMIKVY 202
+G++ G V+ AR++FD M +K +W+ M+ Y
Sbjct: 265 MVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGY 324
Query: 203 ERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDV 262
+ G + I +F M +EG+ +++ L CA L L+ G+ VH + + D+
Sbjct: 325 VQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSDI 384
Query: 263 YVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSS 322
V + LI+MY KC + IF+N + V WN++I GYAQ G ++L F EM S
Sbjct: 385 SVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSL 444
Query: 323 GVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVED 382
G+ PD T+V V+ A + + + I + + ++ +VD+ + G +
Sbjct: 445 GMKPDSFTMVSVIPALAELSVTRHAKWI-HGLIIRSCLDKNIFVTTALVDMYSKCGAIHM 503
Query: 383 AMKLIEAMPFEPDAIIWGSLLGACRTH 409
A KL + M + I W +++ TH
Sbjct: 504 ARKLFD-MISDRHVITWNAMIDGYGTH 529
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 143/288 (49%), Gaps = 12/288 (4%)
Query: 71 QTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLF------EV 124
QT +V + + G ++E +F+ + K + TM+ GY N+ ++ A +V
Sbjct: 84 QTKLVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLETALAFLCRMRYDDV 143
Query: 125 MPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGL----GQNGEVQKA 180
P ++ + G ++ E+ + S A+ + G+ + ++ A
Sbjct: 144 KPVVYNFTYLLKVCG--DNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDA 201
Query: 181 RVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASL 240
+FD+M E+D +W+ +I + + G+ + ++L MQ EG R + +L++VL A +
Sbjct: 202 YKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADV 261
Query: 241 ASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSII 300
L G+ +H +R F V +++ L MY KCG + +LIFD K +V WNS++
Sbjct: 262 GLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMM 321
Query: 301 SGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGR 348
GY Q G EK++ VF +M G+ P VT++ L AC+ G ++ G+
Sbjct: 322 DGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGK 369
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 34/173 (19%), Positives = 76/173 (43%), Gaps = 5/173 (2%)
Query: 233 VLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKD 292
+L +C S+ L Q+ +++ + + L++++ K G + + +F+ K
Sbjct: 55 LLELCTSMKEL---HQIIPLVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDKL 111
Query: 293 IVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFE 352
++++++ GYA+ E +L M V P +L C +K G+EI
Sbjct: 112 DALYHTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHG 171
Query: 353 SMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
+ + +V++ + Q++DA K+ + MP E D + W +++
Sbjct: 172 QLITNSFA-ANVFAMTGVVNMYAKCRQIDDAYKMFDRMP-ERDLVSWNTIIAG 222
>gi|302758830|ref|XP_002962838.1| hypothetical protein SELMODRAFT_79052 [Selaginella moellendorffii]
gi|300169699|gb|EFJ36301.1| hypothetical protein SELMODRAFT_79052 [Selaginella moellendorffii]
Length = 652
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 230/620 (37%), Positives = 345/620 (55%), Gaps = 23/620 (3%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRL- 59
+ +NV SWT M+ + E F M + + V + F+ S DAR +
Sbjct: 36 IQSKNVFSWTMMLAAFAENRDFDRCWLFFRGMLLQGINPGEVGISIFL--SACTDAREIT 93
Query: 60 ---------FDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYV 110
E++ + QT +V Y + G + +F M ++V++W+ M++ Y
Sbjct: 94 IGRSIQLAILGTGIEEESIVQTALVSLYGKLGHCTDAASVFLRMSHRDVVAWSAMVAAYA 153
Query: 111 NNNRIDVARKLFEVMP----EKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKS----VV 162
N A LF M N+V+ + L G ++ + + + + VV
Sbjct: 154 RNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLGDLRSGALMHQRVEAQGIQSGVV 213
Query: 163 ASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEG 222
+++ G+ G ++ A F Q+ EK+ WS + Y R + I + M EG
Sbjct: 214 VGTALVNLYGKCGRIEAAAEAFGQIVEKNVVAWSAISAAYARNDRNRDAIRVLHRMDLEG 273
Query: 223 VRVNFPSLISVLSVCASLASLDHGRQVHAQL--VRCQFDVDVYVASVLITMYIKCGELVK 280
+ N + +SVL CA++A+L GR++H ++ + + DVYV + L+ MY KCG L
Sbjct: 274 LAPNSTTFVSVLDACAAIAALKQGRRIHERIHVLGGGLESDVYVLTALVNMYSKCGNLAL 333
Query: 281 GKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSY 340
+FD A D+V+WNS+I+ AQ+G EK+L++F M G+ P +T VL ACS+
Sbjct: 334 AGNMFDKIAHLDLVLWNSLIATNAQHGQTEKALELFERMRLEGLQPTIITFTSVLFACSH 393
Query: 341 TGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWG 400
G + +GR+ F S + + P+ EH+ CMVDLLGRAG + D+ L+ MPFEP + W
Sbjct: 394 AGMLDQGRKHFVSFIGDHGIFPEAEHFGCMVDLLGRAGWIVDSEDLLLHMPFEPHPVAWM 453
Query: 401 SLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRN 460
+ LGACRT+ +D A AA+ L QL+P+ PY+LLSN+YA GR+ DVA +R+ M+
Sbjct: 454 AFLGACRTYRNMDGAIWAAENLFQLDPRKRAPYVLLSNMYAKAGRWSDVARMRQAMQLFM 513
Query: 461 VIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDV 520
+K G SWIEV+ +VH F D + HP I L+++ L++ AGY PD+ VLHDV
Sbjct: 514 TVKEAGRSWIEVKDRVHEFISGD-LDHPRIGEIHAELQRLTKLMKAAGYVPDTEMVLHDV 572
Query: 521 DEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIIL 580
+E K + YHSEKLA+A+ L+ PEG PIRV+KNLRVC DCH+A K ISK++ REI++
Sbjct: 573 KQEVKETMVGYHSEKLAMAFALLTTPEGSPIRVVKNLRVCNDCHTASKFISKLVNREIVV 632
Query: 581 RDANRFHHFKDGLCSCRDYW 600
RD NRFH F++G CSC DYW
Sbjct: 633 RDCNRFHRFQNGACSCGDYW 652
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 94/348 (27%), Positives = 154/348 (44%), Gaps = 12/348 (3%)
Query: 78 YCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVM----PEKNEVSW 133
Y + R D+ +F + KNV SWT M++ + N D F M EV
Sbjct: 20 YTKCDRFDDALAVFHGIQSKNVFSWTMMLAAFAENRDFDRCWLFFRGMLLQGINPGEVGI 79
Query: 134 TAMLMGYTQC-----GRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMR 188
+ L T GR L + +S+V + +++ G+ G A VF +M
Sbjct: 80 SIFLSACTDAREITIGRSIQLAILGTGIEEESIVQT-ALVSLYGKLGHCTDAASVFLRMS 138
Query: 189 EKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQ 248
+D WS M+ Y R G+ E + LF M +GV N +L+S L CASL L G
Sbjct: 139 HRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLGDLRSGAL 198
Query: 249 VHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGL 308
+H ++ V V + L+ +Y KCG + F K++V W++I + YA+
Sbjct: 199 MHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAAEAFGQIVEKNVVAWSAISAAYARNDR 258
Query: 309 GEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKS-KYLVEPKTEHY 367
+++V H M G+ P+ T V VL AC+ +K+GR I E + +E
Sbjct: 259 NRDAIRVLHRMDLEGLAPNSTTFVSVLDACAAIAALKQGRRIHERIHVLGGGLESDVYVL 318
Query: 368 ACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLA 415
+V++ + G + A + + + D ++W SL+ H + + A
Sbjct: 319 TALVNMYSKCGNLALAGNMFDKIA-HLDLVLWNSLIATNAQHGQTEKA 365
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 65/143 (45%), Gaps = 2/143 (1%)
Query: 263 YVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSS 322
++ ++LI +Y KC +F SK++ W +++ +A+ ++ F M
Sbjct: 11 FLCNLLIDLYTKCDRFDDALAVFHGIQSKNVFSWTMMLAAFAENRDFDRCWLFFRGMLLQ 70
Query: 323 GVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVED 382
G+ P +V + LSAC+ ++ GR I ++ + E A +V L G+ G D
Sbjct: 71 GINPGEVGISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTA-LVSLYGKLGHCTD 129
Query: 383 AMKLIEAMPFEPDAIIWGSLLGA 405
A + M D + W +++ A
Sbjct: 130 AASVFLRMSHR-DVVAWSAMVAA 151
>gi|225462250|ref|XP_002263297.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
[Vitis vinifera]
gi|297736133|emb|CBI24171.3| unnamed protein product [Vitis vinifera]
Length = 687
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 240/672 (35%), Positives = 362/672 (53%), Gaps = 84/672 (12%)
Query: 12 MVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQ 71
++ Y G + A LF ++P+ ++ +WT+++ + R +A + ++ K+ V
Sbjct: 17 FIKVYSNSGDLQRARHLFDKIPQPDLPTWTILISALTKHGRSLEAIQYYNDFRHKNCVEP 76
Query: 72 TNMVL--------------------------GYCQD-------------GRVDEG-REIF 91
++L G+C D R EG R +F
Sbjct: 77 DKLLLLSVAKACASLRDVMNAKRVHEDAIRFGFCSDVLLGNALIDMYGKCRCSEGARLVF 136
Query: 92 DEMPKKNVISWTTMISGYVNNNRIDVARKLFEVM----PEKNEVSWTAML---------- 137
+ MP ++VISWT+M S YVN + A F M N V+ +++L
Sbjct: 137 EGMPFRDVISWTSMASCYVNCGLLREALGAFRKMGLNGERPNSVTVSSILPACTDLKDLK 196
Query: 138 -------------MG------------YTQCGRIQDAWELFKAMPMKSVVASNSMILGLG 172
MG Y C I+ A +F +M + V+ N +I
Sbjct: 197 SGREVHGFVVRNGMGGNVFVSSALVNMYASCLSIRQAQLVFDSMSRRDTVSWNVLITAYF 256
Query: 173 QNGEVQKARVVFDQMREK----DDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFP 228
N E +K VF +M + + A+W+ +I + G + +++ + MQ G + N
Sbjct: 257 LNKECEKGLSVFGRMMSEGVGLNYASWNAVIGGCMQNGRTEKALEVLSRMQNSGFKPNQI 316
Query: 229 SLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNF 288
++ SVL C +L SL G+Q+H + R F D+ + L+ MY KCG+L + +F
Sbjct: 317 TITSVLPACTNLESLRGGKQIHGYIFRHWFFQDLTTTTALVFMYAKCGDLELSRRVFSMM 376
Query: 289 ASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGR 348
+D V WN++I + +G GE++L +F EM SGV P+ VT GVLS CS++ V EG
Sbjct: 377 TKRDTVSWNTMIIATSMHGNGEEALLLFREMVDSGVRPNSVTFTGVLSGCSHSRLVDEGL 436
Query: 349 EIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRT 408
IF+SM + VEP +H++CMVD+L RAG++E+A + I+ MP EP A WG+LLG CR
Sbjct: 437 LIFDSMSRDHSVEPDADHHSCMVDVLSRAGRLEEAYEFIKKMPIEPTAGAWGALLGGCRV 496
Query: 409 HMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCS 468
+ ++L +AA +L ++E N G Y+LLSNI S + + +E RK MR R V K PGCS
Sbjct: 497 YKNVELGRIAANRLFEIESDNPGNYVLLSNILVSAKLWSEASETRKLMRDRGVTKNPGCS 556
Query: 469 WIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHS 528
WI+V +VH F D S+ + I R L+ +G +R AGY P++ FVL DVD+EEK
Sbjct: 557 WIQVRNRVHTFVVGD-KSNDQSDEIYRFLDYMGEKMRIAGYLPNTDFVLQDVDQEEKEEV 615
Query: 529 LRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHH 588
L HSEKLAVA+G++ L IRV KNLR+CGDCH+AIK ++K++G +II+RD+ RFHH
Sbjct: 616 LCNHSEKLAVAFGVLNLNGESSIRVFKNLRICGDCHNAIKFMAKIVGVKIIVRDSLRFHH 675
Query: 589 FKDGLCSCRDYW 600
F+DGLCSC+D+W
Sbjct: 676 FRDGLCSCQDFW 687
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/306 (22%), Positives = 121/306 (39%), Gaps = 51/306 (16%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM----PEKNVVSWTVMLGGFIRDSRIDDA 56
MP R+V+SWT+M YV G++ EA F +M N V+ + +L +
Sbjct: 139 MPFRDVISWTSMASCYVNCGLLREALGAFRKMGLNGERPNSVTVSSILPACTDLKDLKSG 198
Query: 57 RRLFDMMPEK----DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
R + + +V + +V Y + + + +FD M +++ +SW +I+ Y N
Sbjct: 199 REVHGFVVRNGMGGNVFVSSALVNMYASCLSIRQAQLVFDSMSRRDTVSWNVLITAYFLN 258
Query: 113 NRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAMP----------- 157
+ +F M + N SW A++ G Q GR + A E+ M
Sbjct: 259 KECEKGLSVFGRMMSEGVGLNYASWNAVIGGCMQNGRTEKALEVLSRMQNSGFKPNQITI 318
Query: 158 ----------------------------MKSVVASNSMILGLGQNGEVQKARVVFDQMRE 189
+ + + +++ + G+++ +R VF M +
Sbjct: 319 TSVLPACTNLESLRGGKQIHGYIFRHWFFQDLTTTTALVFMYAKCGDLELSRRVFSMMTK 378
Query: 190 KDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQV 249
+D +W+ MI G E + LF M GVR N + VLS C+ +D G +
Sbjct: 379 RDTVSWNTMIIATSMHGNGEEALLLFREMVDSGVRPNSVTFTGVLSGCSHSRLVDEGLLI 438
Query: 250 HAQLVR 255
+ R
Sbjct: 439 FDSMSR 444
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 65/141 (46%), Gaps = 3/141 (2%)
Query: 263 YVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEM-FS 321
++A I +Y G+L + + +FD D+ W +IS ++G ++++ +++
Sbjct: 12 HLALKFIKVYSNSGDLQRARHLFDKIPQPDLPTWTILISALTKHGRSLEAIQYYNDFRHK 71
Query: 322 SGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVE 381
+ V PD + L+ V AC+ V + + E ++ ++D+ G+ E
Sbjct: 72 NCVEPDKLLLLSVAKACASLRDVMNAKRVHED-AIRFGFCSDVLLGNALIDMYGKCRCSE 130
Query: 382 DAMKLIEAMPFEPDAIIWGSL 402
A + E MPF D I W S+
Sbjct: 131 GARLVFEGMPFR-DVISWTSM 150
>gi|326526103|dbj|BAJ93228.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 623
Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust.
Identities = 214/554 (38%), Positives = 324/554 (58%), Gaps = 36/554 (6%)
Query: 2 PERNVVSWTAMVRGYVEEGMITEAGTLFWQMPE--KNVVSWTVMLGGFIRDSRIDDARRL 59
P+R+VVSWTAMV Y +G + EA L P+ +NVV+WT +L G+ R R+D+AR L
Sbjct: 66 PDRDVVSWTAMVAAYARQGQLHEASALL-HRPDARRNVVTWTALLSGYARARRVDEARAL 124
Query: 60 FDMMPEKDVVAQTNMVLGYCQDGRV-------------------------------DEGR 88
FD MPE++VV+ M+ Y GR+ DE R
Sbjct: 125 FDRMPERNVVSWNTMLEAYASAGRMGAACALFDGMPVRDAGSWNILLAALVRSGTMDEAR 184
Query: 89 EIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQD 148
+F+ MP++NV+SWTTMISG + D AR LF+ MPE+N VSW AM+ GY + RI +
Sbjct: 185 RLFERMPERNVMSWTTMISGLARSGSADEARALFDGMPERNVVSWNAMISGYARNLRIDE 244
Query: 149 AWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYE 208
A +LF MP + V + N MI G QN +++KA+ +FD+M +++ +W+ M+ +
Sbjct: 245 ALDLFMNMPERDVASWNIMITGFIQNKDLKKAQELFDEMPKRNVVSWTTMMNGCLQGNES 304
Query: 209 LEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVL 268
+ +F M +G+R N + + + ++LA L G+QVH + + F D ++ S L
Sbjct: 305 EMALQVFNGMLVDGIRPNQVTFLGAVDAGSNLAGLSEGQQVHQMICKTPFQFDNFIESSL 364
Query: 269 ITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDD 328
+ +Y KCGE+ + +FD KD++ WN +I+ YA +G G +++ ++ +M + P+D
Sbjct: 365 MKLYAKCGEIRLARKVFDLSGEKDVISWNGMIAAYAHHGAGVEAIALYEKMQENRYKPND 424
Query: 329 VTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIE 388
VT VG+LSACS++G V EG IFE M + + EHY+C++DL RAG+++DA +LI
Sbjct: 425 VTYVGLLSACSHSGLVDEGLRIFEYMAKDKSIAVRDEHYSCLIDLCSRAGRLDDAKRLIN 484
Query: 389 AMPFEP-DAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFH 447
+ +P + +W +LLG C H + ++AA+ LL+ EP NAG Y LLSNIYAS G++
Sbjct: 485 GLKLKPTSSTVWSALLGGCNAHGNESIGDLAARNLLEAEPDNAGTYTLLSNIYASAGKWK 544
Query: 448 DVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREA 507
+ A++R M R + K PGCSWIE+ KVH+F RD SH E +I +L+ I ++R
Sbjct: 545 EAAKIRSEMNDRGLKKQPGCSWIELANKVHVFVARD-KSHSESELIYSLLQDIHHMMRMD 603
Query: 508 GYCPDSSFVLHDVD 521
G P L D D
Sbjct: 604 GSDPRDHMQLIDED 617
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 109/360 (30%), Positives = 193/360 (53%), Gaps = 13/360 (3%)
Query: 52 RIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEM-PKKNVISWTTMISGYV 110
R+ DARRLFD P++DVV+ T MV Y + G++ E + ++NV++WT ++SGY
Sbjct: 54 RVPDARRLFDRTPDRDVVSWTAMVAAYARQGQLHEASALLHRPDARRNVVTWTALLSGYA 113
Query: 111 NNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILG 170
R+D AR LF+ MPE+N VSW ML Y GR+ A LF MP++ + N ++
Sbjct: 114 RARRVDEARALFDRMPERNVVSWNTMLEAYASAGRMGAACALFDGMPVRDAGSWNILLAA 173
Query: 171 LGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSL 230
L ++G + +AR +F++M E++ +W+ MI R G E LF M + N S
Sbjct: 174 LVRSGTMDEARRLFERMPERNVMSWTTMISGLARSGSADEARALFDGMPER----NVVSW 229
Query: 231 ISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFAS 290
+++S A +D + + + DV +++IT +I+ +L K + +FD
Sbjct: 230 NAMISGYARNLRIDEALDLFMNMP----ERDVASWNIMITGFIQNKDLKKAQELFDEMPK 285
Query: 291 KDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREI 350
+++V W ++++G Q E +L+VF+ M G+ P+ VT +G + A S + EG+++
Sbjct: 286 RNVVSWTTMMNGCLQGNESEMALQVFNGMLVDGIRPNQVTFLGAVDAGSNLAGLSEGQQV 345
Query: 351 FESM-KSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTH 409
+ + K+ + + E + ++ L + G++ A K+ + + E D I W ++ A H
Sbjct: 346 HQMICKTPFQFDNFIE--SSLMKLYAKCGEIRLARKVFD-LSGEKDVISWNGMIAAYAHH 402
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 90/435 (20%), Positives = 168/435 (38%), Gaps = 75/435 (17%)
Query: 149 AWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYE 208
A +F V N I L G V AR +FD+ ++D +W+ M+ Y R+G
Sbjct: 27 AAAVFSTDAFSHVQDPNRRIAELAAAGRVPDARRLFDRTPDRDVVSWTAMVAAYARQG-- 84
Query: 209 LEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVL 268
++ + L+ + R N V + L
Sbjct: 85 -QLHEASALLHRPDARRN-----------------------------------VVTWTAL 108
Query: 269 ITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDD 328
++ Y + + + + +FD +++V WN+++ YA G + +F M + D
Sbjct: 109 LSGYARARRVDEARALFDRMPERNVVSWNTMLEAYASAGRMGAACALFDGM----PVRDA 164
Query: 329 VTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIE 388
+ +L+A +G + E R +FE M + ++ + M+ L R+G ++A L +
Sbjct: 165 GSWNILLAALVRSGTMDEARRLFERMPERNVMS-----WTTMISGLARSGSADEARALFD 219
Query: 389 AMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHD 448
MP E + + W +++ ++++D A + + ++ + ++ +
Sbjct: 220 GMP-ERNVVSWNAMISGYARNLRID---EALDLFMNMPERDVASWNIMITGFIQNKDLKK 275
Query: 449 VAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAG 508
EL M KRNV+ SW M G C+ E M L+ G+L + G
Sbjct: 276 AQELFDEMPKRNVV-----SWTT------MMNG--CLQGNESEMA---LQVFNGMLVD-G 318
Query: 509 YCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLP----EGVPIRVMKNLRVCGDCH 564
P+ L VD + L SE V + K P + +MK CG+
Sbjct: 319 IRPNQVTFLGAVDAGSNLAGL---SEGQQVHQMICKTPFQFDNFIESSLMKLYAKCGEIR 375
Query: 565 SAIKLISKVMGREII 579
A K+ +++I
Sbjct: 376 LARKVFDLSGEKDVI 390
>gi|356567494|ref|XP_003551954.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Glycine max]
Length = 722
Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust.
Identities = 246/673 (36%), Positives = 369/673 (54%), Gaps = 92/673 (13%)
Query: 16 YVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMV 75
Y + G + A T F NV S+ ++ + + S I AR++FD +P+ D+V+ ++
Sbjct: 54 YSKCGSLHNAQTSFDLTQYPNVFSYNTLINAYAKHSLIHLARQVFDEIPQPDIVSYNTLI 113
Query: 76 LGYCQDGRVDEGREIFDEMPKKNV-----------------------ISWTTMISGY--- 109
Y G +F E+ + + ++ GY
Sbjct: 114 AAYADRGECRPALRLFAEVRELRFGLDGFTLSGVIIACGDDVGLVRQLHCFVVVCGYDCY 173
Query: 110 --VNN---------NRIDVARKLFEVMPE---KNEVSWTAMLMGYTQCGRIQDAWELFKA 155
VNN ++ AR++F M E ++EVSW AM++ Q +A ELF+
Sbjct: 174 ASVNNAVLACYSRKGFLNEARRVFREMGEGGGRDEVSWNAMIVACGQHREGLEAVELFRE 233
Query: 156 M----------PMKSVVAS-------------NSMILGLGQNGEVQ-------------- 178
M M SV+ + + M++ G +G
Sbjct: 234 MVRRGLKVDMFTMASVLTAFTCVKDLVGGMQFHGMMIKSGFHGNSHVGSGLIDLYSKCAG 293
Query: 179 ---KARVVFDQMREKDDATWSGMIKVYER-KGYELEVIDLFTLMQKEGVRVNFPSLISVL 234
+ R VF+++ D W+ MI + + + + I F MQ G + S + V
Sbjct: 294 GMVECRKVFEEIAAPDLVLWNTMISGFSQYEDLSEDGIWCFREMQHNGFHPDDCSFVCVT 353
Query: 235 SVCASLASLDHGRQVHAQLVRCQFDVD-VYVASVLITMYIKCGELVKGKLIFDNFASKDI 293
S C++L+S G+QVHA ++ + V V + L+ MY KCG + + +FD ++
Sbjct: 354 SACSNLSSPSVGKQVHALAIKSDIPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNM 413
Query: 294 VMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFES 353
V NS+I+GYAQ+G+ +SL++F M + P+ +T + VLSAC +TGKV+EG++ F
Sbjct: 414 VSLNSMIAGYAQHGVEVESLRLFELMLQKDIAPNTITFIAVLSACVHTGKVEEGQKYFNM 473
Query: 354 MKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLD 413
MK ++ +EP+ EHY+CM+DLLGRAG++++A ++IE MPF P +I W +LLGACR H ++
Sbjct: 474 MKERFRIEPEAEHYSCMIDLLGRAGKLKEAERIIETMPFNPGSIEWATLLGACRKHGNVE 533
Query: 414 LAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVE 473
LA AA + LQLEP NA PY++LSN+YAS R+ + A +++ MR+R V K PGCSWIE++
Sbjct: 534 LAVKAANEFLQLEPYNAAPYVMLSNMYASAARWEEAATVKRLMRERGVKKKPGCSWIEID 593
Query: 474 KKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLR---EAGYCPDSSFVL---HDVDEEEKVH 527
KKVH+F D HPMI + +G +LR +AGY PD + L +V+ +EK
Sbjct: 594 KKVHVFVAED----TSHPMIKEIHVYMGEILRKMKQAGYVPDIRWALVKDEEVEPDEKER 649
Query: 528 SLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFH 587
L YHSEKLAVA+GL+ E VPI V+KNLR+CGDCH+AIKLIS + GREI +RD +RFH
Sbjct: 650 RLLYHSEKLAVAFGLISTEEWVPILVVKNLRICGDCHNAIKLISAITGREITVRDTHRFH 709
Query: 588 HFKDGLCSCRDYW 600
FK+G CSC DYW
Sbjct: 710 CFKEGHCSCGDYW 722
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/137 (21%), Positives = 65/137 (47%), Gaps = 8/137 (5%)
Query: 223 VRVNFP----SLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGEL 278
++ FP + ++L C + L G+ +HA + Y+++ +Y KCG L
Sbjct: 1 MQCTFPLQLQTFRNLLKACIAQRDLITGKTLHALYFKSLIPPSTYLSNHFTLLYSKCGSL 60
Query: 279 VKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSAC 338
+ FD ++ +N++I+ YA++ L + +VF E+ PD V+ +++A
Sbjct: 61 HNAQTSFDLTQYPNVFSYNTLINAYAKHSLIHLARQVFDEI----PQPDIVSYNTLIAAY 116
Query: 339 SYTGKVKEGREIFESMK 355
+ G+ + +F ++
Sbjct: 117 ADRGECRPALRLFAEVR 133
>gi|357142905|ref|XP_003572732.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
mitochondrial-like [Brachypodium distachyon]
Length = 669
Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust.
Identities = 221/548 (40%), Positives = 332/548 (60%), Gaps = 16/548 (2%)
Query: 67 DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVM- 125
D + + ++ Y R + R+ FDE+P N + T M SGYV NN + + LF +
Sbjct: 124 DPFSASALLHMYNHCSRPIDARKAFDEIPSPNPVIITAMASGYVRNNLVYPSLALFRKLI 183
Query: 126 --PEKNEVSWTAMLMGYTQCGRIQDA--WELFKAMPMKSVVAS-----NSMILGLGQNG- 175
V A L+ ++ RI D A+ +K+ + N+M+ + G
Sbjct: 184 ASGSATAVDEAAALVAFSASARIPDCGITSSLHALVVKTGLDGDAGVVNTMLDAYAKGGR 243
Query: 176 -EVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQK--EGVRVNFPSLIS 232
++ AR VFD M EKD +W+ MI +Y + G + + L+ M ++ N +L +
Sbjct: 244 RDLGAARKVFDTM-EKDVVSWNSMIALYAQNGMSADALGLYRKMLNVSGSIKCNAVTLSA 302
Query: 233 VLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKD 292
+L CA ++ G+ +H Q+VR + +VYV + ++ MY KCG + + F K+
Sbjct: 303 ILLACAHAGTIQTGKCIHNQVVRMGLEENVYVGTSVVDMYSKCGRVEMARKAFQKIKEKN 362
Query: 293 IVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFE 352
I+ W+++I+GY +G G+++L +F+EM SG P+ +T + VL+ACS+ G + +GR +
Sbjct: 363 ILSWSAMITGYGMHGHGQEALDIFNEMCRSGQNPNYITFISVLAACSHAGLLDKGRYWYN 422
Query: 353 SMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKL 412
+MK ++ +EP EHY CMVDLLGRAG +++A LI+ M +PDA IWG+LL ACR H +
Sbjct: 423 AMKKRFGIEPGVEHYGCMVDLLGRAGCLDEAYGLIKEMKVKPDAAIWGALLSACRIHKNV 482
Query: 413 DLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEV 472
+LAE++AK+L +L+ N G Y+LLSNIYA G + DV +R ++ R + KPPG S +E+
Sbjct: 483 ELAEISAKRLFELDATNCGYYVLLSNIYAEAGMWKDVERMRVLVKTRGIEKPPGYSSVEL 542
Query: 473 EKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYH 532
+ + H+F D SHP+H I L K+ ++EAGY P++ VLHD+DEEEK +L H
Sbjct: 543 KGRTHLFYVGD-KSHPQHKEIYSYLGKLLEKMQEAGYVPNTGSVLHDLDEEEKASALHIH 601
Query: 533 SEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDG 592
SEKLA+A+ L+ G I V+KNLRVC DCH+AIKLI+K+ REII+RD RFHHFKDG
Sbjct: 602 SEKLAIAFALMNSVPGSVIHVIKNLRVCTDCHTAIKLITKIAQREIIVRDLQRFHHFKDG 661
Query: 593 LCSCRDYW 600
CSC DYW
Sbjct: 662 SCSCGDYW 669
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 125/269 (46%), Gaps = 23/269 (8%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM---PEKNVVSWTVMLGGFIRDSRIDDAR 57
+P N V TAM GYV ++ + LF ++ V L F +RI D
Sbjct: 151 IPSPNPVIITAMASGYVRNNLVYPSLALFRKLIASGSATAVDEAAALVAFSASARIPDCG 210
Query: 58 RLFDMMP-------EKDVVAQTNMVLGYCQDGRVDEG--REIFDEMPKKNVISWTTMISG 108
+ + D M+ Y + GR D G R++FD M +K+V+SW +MI+
Sbjct: 211 ITSSLHALVVKTGLDGDAGVVNTMLDAYAKGGRRDLGAARKVFDTM-EKDVVSWNSMIAL 269
Query: 109 YVNN----NRIDVARKLFEVMP--EKNEVSWTAMLMGYTQCGRIQDAW----ELFKAMPM 158
Y N + + + RK+ V + N V+ +A+L+ G IQ ++ +
Sbjct: 270 YAQNGMSADALGLYRKMLNVSGSIKCNAVTLSAILLACAHAGTIQTGKCIHNQVVRMGLE 329
Query: 159 KSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLM 218
++V S++ + G V+ AR F +++EK+ +WS MI Y G+ E +D+F M
Sbjct: 330 ENVYVGTSVVDMYSKCGRVEMARKAFQKIKEKNILSWSAMITGYGMHGHGQEALDIFNEM 389
Query: 219 QKEGVRVNFPSLISVLSVCASLASLDHGR 247
+ G N+ + ISVL+ C+ LD GR
Sbjct: 390 CRSGQNPNYITFISVLAACSHAGLLDKGR 418
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 114/251 (45%), Gaps = 21/251 (8%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQM------PEKNVVSWTVMLGGFIRDSRIDDA 56
E++VVSW +M+ Y + GM +A L+ +M + N V+ + +L I
Sbjct: 257 EKDVVSWNSMIALYAQNGMSADALGLYRKMLNVSGSIKCNAVTLSAILLACAHAGTIQTG 316
Query: 57 R----RLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+ ++ M E++V T++V Y + GRV+ R+ F ++ +KN++SW+ MI+GY +
Sbjct: 317 KCIHNQVVRMGLEENVYVGTSVVDMYSKCGRVEMARKAFQKIKEKNILSWSAMITGYGMH 376
Query: 113 NRIDVARKLFEVM----PEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMK-----SVVA 163
A +F M N +++ ++L + G + + AM + V
Sbjct: 377 GHGQEALDIFNEMCRSGQNPNYITFISVLAACSHAGLLDKGRYWYNAMKKRFGIEPGVEH 436
Query: 164 SNSMILGLGQNGEVQKARVVFDQMREKDDAT-WSGMIKVYE-RKGYELEVIDLFTLMQKE 221
M+ LG+ G + +A + +M+ K DA W ++ K EL I L + +
Sbjct: 437 YGCMVDLLGRAGCLDEAYGLIKEMKVKPDAAIWGALLSACRIHKNVELAEISAKRLFELD 496
Query: 222 GVRVNFPSLIS 232
+ L+S
Sbjct: 497 ATNCGYYVLLS 507
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 73/164 (44%), Gaps = 8/164 (4%)
Query: 246 GRQVHAQLVRCQ-FDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYA 304
GRQ+H +R F D + AS L+ MY C + + FD S + V+ ++ SGY
Sbjct: 108 GRQLHLLAIRSGLFPSDPFSASALLHMYNHCSRPIDARKAFDEIPSPNPVIITAMASGYV 167
Query: 305 QYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEG--REIFESMKSKYLVEP 362
+ L SL +F ++ +SG V L A S + ++ + ++ K ++
Sbjct: 168 RNNLVYPSLALFRKLIASG-SATAVDEAAALVAFSASARIPDCGITSSLHALVVKTGLDG 226
Query: 363 KTEHYACMVDLLGRAGQ--VEDAMKLIEAMPFEPDAIIWGSLLG 404
M+D + G+ + A K+ + M E D + W S++
Sbjct: 227 DAGVVNTMLDAYAKGGRRDLGAARKVFDTM--EKDVVSWNSMIA 268
>gi|357438977|ref|XP_003589765.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478813|gb|AES60016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 960
Score = 423 bits (1088), Expect = e-115, Method: Compositional matrix adjust.
Identities = 229/647 (35%), Positives = 360/647 (55%), Gaps = 58/647 (8%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEK----NVVSWTVMLGGFIRDSRIDDA 56
MPER+ VSW ++ + + G + +F +M + N +++ +L S +
Sbjct: 238 MPERDEVSWNTLISIFSQHGFGVQCLAMFVEMCNQGFSPNFMTYGSVLSACASTSDLKWG 297
Query: 57 R----RLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
R+ M D+V ++ Y + G +D + +F + + + ISW ++I+G V+
Sbjct: 298 AHLHARILRMEHSLDLVFGNGLIDMYAKCGCLDLAKRVFKSLREHDHISWNSLITGVVHF 357
Query: 113 NRIDVARKLFEVMPEKNEV-------------------SWTAMLMGYT------------ 141
+ A LF M + V S +L GYT
Sbjct: 358 GLGEDALILFNQMRRSSVVLDEFILPTILGVCSGPDYASTGELLHGYTIKSGMGSSAPVG 417
Query: 142 --------QCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDA 193
+CG A +F+ MP+++ ++ +MI ++G++ KAR FD M E++
Sbjct: 418 NAIITMYAKCGDTDKADLVFRLMPLRNTISWTAMITAFSRSGDIGKARGYFDMMPERNIV 477
Query: 194 TWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQL 253
TW+ M+ Y + G+ E + L+ M+ GV+ ++ + + + CA LA + G QV
Sbjct: 478 TWNSMLSTYVQNGFSEEGLKLYVSMRSNGVQPDWITFTTSIRACADLAIVKLGMQVVTHA 537
Query: 254 VRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSL 313
+ ++V VA+ ++TMY +CG + + K FD+ KD++ WN++++ +AQ GLG K +
Sbjct: 538 TKFGLSLNVSVANSIVTMYSRCGLIKEAKNTFDSIDDKDLISWNAMLAAFAQNGLGIKVI 597
Query: 314 KVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDL 373
F +M + P+ ++ V VLS CS+ G V EG+ F+SM + + P EH++CMVDL
Sbjct: 598 DTFEDMLKTECKPNHISYVSVLSGCSHMGLVAEGKHYFDSMTRVFGISPTNEHFSCMVDL 657
Query: 374 LGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPY 433
LGRAG +E A LIE MPF+P+A +W +LLG+CR H L LAE AAKKL++L+ + + Y
Sbjct: 658 LGRAGLLEQAKDLIEGMPFKPNATVWSALLGSCRVHHDLRLAETAAKKLMELDVEGSEGY 717
Query: 434 ILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMI 493
+LLSN+Y+ G +VA++RK M+ + + GCSWIEV+ +VH+FT D SHP+ +
Sbjct: 718 VLLSNMYSESGELDNVADMRKLMKVKGIRTSRGCSWIEVDNRVHVFT-VDETSHPQIKEV 776
Query: 494 MRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVH-SLRYHSEKLAVAYGLVKLPEGVPIR 552
LE++ ++ + G + E VH S +YHSEKLA A+GL+ LP +PI
Sbjct: 777 YLKLEEMMKMIEDTG---------KYITVESSVHRSKKYHSEKLAFAFGLLNLPSWMPIH 827
Query: 553 VMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDY 599
VMKNLRVC DCH IKL+S V RE+I+RD RFHHFKDG+CSC+DY
Sbjct: 828 VMKNLRVCDDCHLVIKLLSLVTSRELIMRDGYRFHHFKDGICSCKDY 874
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 128/461 (27%), Positives = 218/461 (47%), Gaps = 48/461 (10%)
Query: 16 YVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPE--KDVVAQTN 73
Y G+ +A +F + +N+ +W M+ + SR+ DA +LFD MP KD V+ T
Sbjct: 53 YSNCGLTHDAFQVFQETHHRNIFTWNTMIRALVSSSRMSDAEKLFDEMPVRVKDSVSWTT 112
Query: 74 MVLGYCQDGRVDEGREIFDEMPK------KNV--ISWTTMIS--GYVNNNRIDVA-RKLF 122
M+ GY Q+G E F M + KN S+T+++ G + ++R+ + L
Sbjct: 113 MISGYSQNGFHSRSFETFSLMIRDTNDGGKNYDPFSFTSVMKACGSLGDSRLAIQLHALV 172
Query: 123 EVMPEKNEVSWTAMLMG-YTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKAR 181
+ E ++G Y +CG + A +F + S+ NSMI G Q KA
Sbjct: 173 SKLGFGMETCIQNSVVGMYVKCGDVDLAETVFFDIERPSLFCWNSMIYGYSQMYGPYKAL 232
Query: 182 VVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLA 241
+F++M E+D+ +W+ +I ++ + G+ ++ + +F M +G NF + SVLS CAS +
Sbjct: 233 QIFNRMPERDEVSWNTLISIFSQHGFGVQCLAMFVEMCNQGFSPNFMTYGSVLSACASTS 292
Query: 242 SLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIIS 301
L G +HA+++R + +D+ + LI MY KCG L K +F + D + WNS+I+
Sbjct: 293 DLKWGAHLHARILRMEHSLDLVFGNGLIDMYAKCGCLDLAKRVFKSLREHDHISWNSLIT 352
Query: 302 GYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACS-----YTGKVKEGREIFESMKS 356
G +GLGE +L +F++M S V+ D+ L +L CS TG++ G I M S
Sbjct: 353 GVVHFGLGEDALILFNQMRRSSVVLDEFILPTILGVCSGPDYASTGELLHGYTIKSGMGS 412
Query: 357 K-----------------------YLVEP--KTEHYACMVDLLGRAGQVEDAMKLIEAMP 391
+ + P T + M+ R+G + A + MP
Sbjct: 413 SAPVGNAIITMYAKCGDTDKADLVFRLMPLRNTISWTAMITAFSRSGDIGKARGYFDMMP 472
Query: 392 FEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGP 432
E + + W S+L T+++ +E K + + P
Sbjct: 473 -ERNIVTWNSMLS---TYVQNGFSEEGLKLYVSMRSNGVQP 509
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 121/520 (23%), Positives = 209/520 (40%), Gaps = 121/520 (23%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPE--KNVVSWTVMLGGF------------- 47
RN+ +W M+R V +++A LF +MP K+ VSWT M+ G+
Sbjct: 71 HRNIFTWNTMIRALVSSSRMSDAEKLFDEMPVRVKDSVSWTTMISGYSQNGFHSRSFETF 130
Query: 48 ---IRDSRIDDARRLFDMMPEKDVVA-----------------------------QTNMV 75
IRD+ +D + +D V+ Q ++V
Sbjct: 131 SLMIRDT--NDGGKNYDPFSFTSVMKACGSLGDSRLAIQLHALVSKLGFGMETCIQNSVV 188
Query: 76 LGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTA 135
Y + G VD +F ++ + ++ W +MI GY A ++F MPE++EVSW
Sbjct: 189 GMYVKCGDVDLAETVFFDIERPSLFCWNSMIYGYSQMYGPYKALQIFNRMPERDEVSWNT 248
Query: 136 MLMGYTQCGRIQDAWELFKAM-------------PMKSVVASNS---------------- 166
++ ++Q G +F M + S AS S
Sbjct: 249 LISIFSQHGFGVQCLAMFVEMCNQGFSPNFMTYGSVLSACASTSDLKWGAHLHARILRME 308
Query: 167 ----MILGLG------QNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFT 216
++ G G + G + A+ VF +RE D +W+ +I G + + LF
Sbjct: 309 HSLDLVFGNGLIDMYAKCGCLDLAKRVFKSLREHDHISWNSLITGVVHFGLGEDALILFN 368
Query: 217 LMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCG 276
M++ V ++ L ++L VC+ G +H ++ V + +ITMY KCG
Sbjct: 369 QMRRSSVVLDEFILPTILGVCSGPDYASTGELLHGYTIKSGMGSSAPVGNAIITMYAKCG 428
Query: 277 ELVKGKLI-------------------------------FDNFASKDIVMWNSIISGYAQ 305
+ K L+ FD ++IV WNS++S Y Q
Sbjct: 429 DTDKADLVFRLMPLRNTISWTAMITAFSRSGDIGKARGYFDMMPERNIVTWNSMLSTYVQ 488
Query: 306 YGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTE 365
G E+ LK++ M S+GV PD +T + AC+ VK G ++ + +K+ +
Sbjct: 489 NGFSEEGLKLYVSMRSNGVQPDWITFTTSIRACADLAIVKLGMQVV-THATKFGLSLNVS 547
Query: 366 HYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
+V + R G +++A +++ + D I W ++L A
Sbjct: 548 VANSIVTMYSRCGLIKEAKNTFDSID-DKDLISWNAMLAA 586
>gi|449510623|ref|XP_004163716.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g27610-like [Cucumis sativus]
Length = 878
Score = 423 bits (1088), Expect = e-115, Method: Compositional matrix adjust.
Identities = 234/620 (37%), Positives = 357/620 (57%), Gaps = 27/620 (4%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV-VSWTVMLGGFIRDSRIDDARRL 59
M R+ V+W M+ GY G E +F +M V +S TV F ++ +R
Sbjct: 266 MVVRDSVTWNIMIGGYAAIGFYLEGFQMFHRMRLAGVKLSRTV----FCTALKLCSQQRE 321
Query: 60 FDMMPE-------------KDVVAQTNMVLGYCQDGRVDEGREIFDEM-PKKNVISWTTM 105
+ + +D+ +T +++ Y + VDE ++F NV++WT M
Sbjct: 322 LNFTKQLHCGVVKNGYEFAQDI--RTALMVTYSKCSSVDEAFKLFSMADAAHNVVTWTAM 379
Query: 106 ISGYVNNNRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSV 161
I G+V NN A LF M + N +++ +L G Q ++ KA K
Sbjct: 380 IGGFVQNNNNKKAVDLFCQMSREGVRPNHFTYSTVLAGKPSSLLSQLHAQIIKAYYEKVP 439
Query: 162 VASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKE 221
+ +++ + G V ++ VF + KD WS M+ + + +++F + KE
Sbjct: 440 SVATALLDAYVKTGNVVESARVFYSIPAKDIVAWSAMLTGLAQTRDSEKAMEVFIQLVKE 499
Query: 222 GVRVNFPSLISVLSVCAS-LASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVK 280
GV+ N + SV++ C+S A+++HG+Q+HA V+ + V+S L+TMY K G +
Sbjct: 500 GVKPNEYTFSSVINACSSSAATVEHGKQIHATAVKSGKSNALCVSSALLTMYSKKGNIES 559
Query: 281 GKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSY 340
+ +F +DIV WNS+I+GY Q+G +K+L+VF M + G+ DDVT +GVL+AC++
Sbjct: 560 AEKVFTRQEERDIVSWNSMITGYGQHGDAKKALEVFQIMQNQGLPLDDVTFIGVLTACTH 619
Query: 341 TGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWG 400
G V+EG + F M Y ++ K EHY+CMVDL RAG + AM +I MPF IW
Sbjct: 620 AGLVEEGEKYFNIMIKDYHIDKKXEHYSCMVDLYSRAGMFDKAMDIINGMPFPASPTIWR 679
Query: 401 SLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRN 460
+LL ACR H L+L ++AA+KL+ L+P +A Y+LLSNI+A G + + A +RK M +R
Sbjct: 680 TLLAACRVHRNLELGKLAAEKLVSLQPNDAVGYVLLSNIHAVAGNWEEKAHVRKLMDERK 739
Query: 461 VIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDV 520
V K GCSWIE++ ++ F D VSHP ++ LE++ L++ GY PD+++V HDV
Sbjct: 740 VKKEAGCSWIEIKNRIFSFLAGD-VSHPFSDLVYAKLEELSIKLKDMGYQPDTNYVFHDV 798
Query: 521 DEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIIL 580
+EE K L HSE+LA+AYGL+ LP G PI++ KNLR+CGDCH+ I+LIS + R +I+
Sbjct: 799 EEEHKEAILSQHSERLAIAYGLIALPPGAPIQIEKNLRICGDCHNVIELISLIEERTLIV 858
Query: 581 RDANRFHHFKDGLCSCRDYW 600
RD+NRFHHFK G+CSC YW
Sbjct: 859 RDSNRFHHFKGGVCSCGGYW 878
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 118/454 (25%), Positives = 211/454 (46%), Gaps = 65/454 (14%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVV 69
T++V Y++ + +F +M KNVVSWT +L G+ R+ D+ L + M + V
Sbjct: 143 TSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSLLSGYARNGLNDEVIHLINQMQMEGVN 202
Query: 70 AQT---NMVLGYCQDGRVDEGREIFDEMPKKNVISWTT-----MISGYVNNNRIDVARKL 121
VLG D + EG M KN +TT +I Y+ + + A +
Sbjct: 203 PNGFTFATVLGALADESIIEGGVQVHAMIVKNGFEFTTFVCNALICMYLKSEMVGDAEAV 262
Query: 122 FEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMI------------- 168
F+ M ++ V+W M+ GY G + +++F M + V S ++
Sbjct: 263 FDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHRMRLAGVKLSRTVFCTALKLCSQQREL 322
Query: 169 -------LGLGQNG-----EVQKA-RVVFDQMREKDDA--------------TWSGMIKV 201
G+ +NG +++ A V + + D+A TW+ MI
Sbjct: 323 NFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSSVDEAFKLFSMADAAHNVVTWTAMIGG 382
Query: 202 YERKGYELEVIDLFTLMQKEGVRVNFPSLISVLS-VCASLASLDHGRQVHAQLVRCQFDV 260
+ + + +DLF M +EGVR N + +VL+ +SL S Q+HAQ+++ ++
Sbjct: 383 FVQNNNNKKAVDLFCQMSREGVRPNHFTYSTVLAGKPSSLLS-----QLHAQIIKAYYEK 437
Query: 261 DVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMF 320
VA+ L+ Y+K G +V+ +F + +KDIV W+++++G AQ EK+++VF ++
Sbjct: 438 VPSVATALLDAYVKTGNVVESARVFYSIPAKDIVAWSAMLTGLAQTRDSEKAMEVFIQLV 497
Query: 321 SSGVMPDDVTLVGVLSACSYT-GKVKEGREI----FESMKSKYLVEPKTEHYACMVDLLG 375
GV P++ T V++ACS + V+ G++I +S KS L + ++ +
Sbjct: 498 KEGVKPNEYTFSSVINACSSSAATVEHGKQIHATAVKSGKSNALCVS-----SALLTMYS 552
Query: 376 RAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTH 409
+ G +E A K+ E D + W S++ H
Sbjct: 553 KKGNIESAEKVFTRQE-ERDIVSWNSMITGYGQH 585
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 83/338 (24%), Positives = 146/338 (43%), Gaps = 31/338 (9%)
Query: 87 GREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKN-EVSWTAMLMGYTQCGR 145
++FDE P K++ + ++ + NN A LF+ + V + CG
Sbjct: 57 AHQLFDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVCGV 116
Query: 146 IQDA-------WELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGM 198
+ D + K+ ++ V S++ + + + R +FD+M K+ +W+ +
Sbjct: 117 LFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSL 176
Query: 199 IKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQF 258
+ Y R G EVI L MQ EGV N + +VL A + ++ G QVHA +V+ F
Sbjct: 177 LSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNGF 236
Query: 259 DVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHE 318
+ +V + LI MY+K + + +FD+ +D V WN +I GYA G + ++FH
Sbjct: 237 EFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHR 296
Query: 319 MFSSGVMPDDVTLVGVLSACS-----------YTGKVKEGREIFESMKSKYLVEPKTEHY 367
M +GV L CS + G VK G E + +++ +V
Sbjct: 297 MRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVT------ 350
Query: 368 ACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
+ V++A KL + + W +++G
Sbjct: 351 ------YSKCSSVDEAFKLFSMADAAHNVVTWTAMIGG 382
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 91/347 (26%), Positives = 162/347 (46%), Gaps = 15/347 (4%)
Query: 66 KDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVM 125
+DV T++V Y + ++GR IFDEM KNV+SWT+++SGY N D L M
Sbjct: 137 EDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSLLSGYARNGLNDEVIHLINQM 196
Query: 126 PEK--NEVSWT-AMLMGYTQCGRIQDAWELFKAMPMK-----SVVASNSMILGLGQNGEV 177
+ N +T A ++G I + AM +K + N++I ++ V
Sbjct: 197 QMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNGFEFTTFVCNALICMYLKSEMV 256
Query: 178 QKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVC 237
A VFD M +D TW+ MI Y G+ LE +F M+ GV+++ + L +C
Sbjct: 257 GDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHRMRLAGVKLSRTVFCTALKLC 316
Query: 238 ASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNF-ASKDIVMW 296
+ L+ +Q+H +V+ ++ + + L+ Y KC + + +F A+ ++V W
Sbjct: 317 SQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSSVDEAFKLFSMADAAHNVVTW 376
Query: 297 NSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKS 356
++I G+ Q +K++ +F +M GV P+ T VL+ GK +
Sbjct: 377 TAMIGGFVQNNNNKKAVDLFCQMSREGVRPNHFTYSTVLA-----GKPSSLLSQLHAQII 431
Query: 357 KYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
K E ++D + G V ++ ++ ++P D + W ++L
Sbjct: 432 KAYYEKVPSVATALLDAYVKTGNVVESARVFYSIP-AKDIVAWSAML 477
>gi|297822535|ref|XP_002879150.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324989|gb|EFH55409.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 872
Score = 423 bits (1088), Expect = e-115, Method: Compositional matrix adjust.
Identities = 230/614 (37%), Positives = 359/614 (58%), Gaps = 20/614 (3%)
Query: 4 RNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV------VSWTVMLGGFIRDSRIDDAR 57
++VV+W +M+ GY G+ EA +F+ M +V + + L +++ R +
Sbjct: 262 KSVVTWNSMISGYAANGLDLEALGMFYSMRLNHVRLSESSFASIIKLCANLKELRFTEQL 321
Query: 58 RL----FDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMP-KKNVISWTTMISGYVNN 112
+ + ++++ +T +++ Y + + + +F E NV+SWT MISG++ N
Sbjct: 322 HCSVVKYGFVFDQNI--RTALMVAYSKCMAMLDALRLFKETGFLGNVVSWTAMISGFLQN 379
Query: 113 NRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMI 168
+ + A LF M K NE +++ +L + ++ K +S +++
Sbjct: 380 DGKEEAVGLFSEMKRKGVRPNEFTYSVILTALPVISPSEVHAQVVKTNYERSSTVGTALL 439
Query: 169 LGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFP 228
+ G+V +A VF + KD WS M+ Y + G I +F+ + K GV+ N
Sbjct: 440 DAYVKLGKVDEAAKVFSGIDNKDIVAWSAMLAGYAQAGETEAAIKIFSELTKGGVKPNEF 499
Query: 229 SLISVLSVCA-SLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDN 287
+ S+L+VCA + AS+ G+Q H ++ + D + V+S L+TMY K G + + +F
Sbjct: 500 TFSSILNVCAATTASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGHIESAEEVFKR 559
Query: 288 FASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEG 347
KD+V WNS+ISGYAQ+G K+L VF EM V D VT +GV +AC++ G V+EG
Sbjct: 560 QREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDSVTFIGVFAACTHAGLVEEG 619
Query: 348 REIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACR 407
+ F+ M + P EH +CMVDL RAGQ+E AMK+I+ MP + IW ++L ACR
Sbjct: 620 EKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIDNMPNLAGSTIWRTILAACR 679
Query: 408 THMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGC 467
H K +L +AA+K++ + P+++ Y+LLSN+YA G + + A++RK M +RNV K PG
Sbjct: 680 VHKKTELGRLAAEKIIAMIPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGY 739
Query: 468 SWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVH 527
SWIEV+ K + F D SHP I LE + L++ GY PD+S+VL D+D+E K
Sbjct: 740 SWIEVKNKTYAFLAGD-RSHPLKDQIYMKLEDLSTRLKDLGYEPDTSYVLQDIDDEHKEA 798
Query: 528 SLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFH 587
L HSE+LA+A+GL+ P+G P+ ++KNLRVCGDCH IKLI+K+ REI++RD+NRFH
Sbjct: 799 VLAQHSERLAIAFGLIATPKGSPLLIIKNLRVCGDCHVVIKLIAKIEEREIVVRDSNRFH 858
Query: 588 HF-KDGLCSCRDYW 600
HF DG+CSC D+W
Sbjct: 859 HFSSDGVCSCGDFW 872
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 122/474 (25%), Positives = 209/474 (44%), Gaps = 87/474 (18%)
Query: 15 GYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPE--------- 65
G + A LF + P+++ S+T +L GF RD R +A RLF +
Sbjct: 40 GAASSSRLYYAHNLFDKSPDRDRESYTSLLFGFSRDGRTQEATRLFLNIQHLGMEMDCSI 99
Query: 66 ------------------------------KDVVAQTNMVLGYCQDGRVDEGREIFDEMP 95
DV T++V Y + +GR +FDEM
Sbjct: 100 FSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRNVFDEMK 159
Query: 96 KKNVISWTTMISGYVNNNRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCG----RIQ 147
++NV++WTT+ISGY N+ + LF M ++ N ++ A L + G +Q
Sbjct: 160 ERNVVTWTTLISGYARNSLNEEVLTLFMRMQDEGTQPNSFTFAAALGVLAEEGVGGRGLQ 219
Query: 148 DAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGY 207
+ K K++ SNS+I + G V+KAR++FD+ K TW+ MI Y G
Sbjct: 220 VHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGL 279
Query: 208 ELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASV 267
+LE + +F M+ VR++ S S++ +CA+L L Q+H +V+ F D + +
Sbjct: 280 DLEALGMFYSMRLNHVRLSESSFASIIKLCANLKELRFTEQLHCSVVKYGFVFDQNIRTA 339
Query: 268 LITMYIKCGELVKGKLIFDNFAS-KDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMP 326
L+ Y KC ++ +F ++V W ++ISG+ Q E+++ +F EM GV P
Sbjct: 340 LMVAYSKCMAMLDALRLFKETGFLGNVVSWTAMISGFLQNDGKEEAVGLFSEMKRKGVRP 399
Query: 327 DDVTLVGVLSAC-----------------------------SYT--GKVKEGREIFESMK 355
++ T +L+A +Y GKV E ++F +
Sbjct: 400 NEFTYSVILTALPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVDEAAKVFSGID 459
Query: 356 SKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMP---FEPDAIIWGSLLGAC 406
+K +V ++ M+ +AG+ E A+K+ + +P+ + S+L C
Sbjct: 460 NKDIVA-----WSAMLAGYAQAGETEAAIKIFSELTKGGVKPNEFTFSSILNVC 508
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 107/458 (23%), Positives = 206/458 (44%), Gaps = 86/458 (18%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEK----NVVSWTVMLGGFIRDSRIDDA 56
M ERNVV+WT ++ GY + E TLF +M ++ N ++ LG +
Sbjct: 158 MKERNVVTWTTLISGYARNSLNEEVLTLFMRMQDEGTQPNSFTFAAALGVLAEEGVGGRG 217
Query: 57 RRLFDMMP----EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
++ ++ +K + +++ Y + G V + R +FD+ K+V++W +MISGY N
Sbjct: 218 LQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAAN 277
Query: 113 ---------------NRIDVARKLF----EVMPEKNEVSW-------------------- 133
N + ++ F ++ E+ +
Sbjct: 278 GLDLEALGMFYSMRLNHVRLSESSFASIIKLCANLKELRFTEQLHCSVVKYGFVFDQNIR 337
Query: 134 TAMLMGYTQCGRIQDAWELFKAMP-MKSVVASNSMILGLGQNGEVQKARVVFDQMREKDD 192
TA+++ Y++C + DA LFK + +VV+ +MI G QN
Sbjct: 338 TALMVAYSKCMAMLDALRLFKETGFLGNVVSWTAMISGFLQN------------------ 379
Query: 193 ATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQ 252
G E E + LF+ M+++GVR N + +L+ ++ +VHAQ
Sbjct: 380 ------------DGKE-EAVGLFSEMKRKGVRPNEFTYSVILTALPVISP----SEVHAQ 422
Query: 253 LVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKS 312
+V+ ++ V + L+ Y+K G++ + +F +KDIV W+++++GYAQ G E +
Sbjct: 423 VVKTNYERSSTVGTALLDAYVKLGKVDEAAKVFSGIDNKDIVAWSAMLAGYAQAGETEAA 482
Query: 313 LKVFHEMFSSGVMPDDVTLVGVLSAC-SYTGKVKEGREIFESMKSKYLVEPKTEHYACMV 371
+K+F E+ GV P++ T +L+ C + T + +G++ F K ++ + ++
Sbjct: 483 IKIFSELTKGGVKPNEFTFSSILNVCAATTASMGQGKQ-FHGFAIKSRLDSSLCVSSALL 541
Query: 372 DLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTH 409
+ + G +E A ++ + E D + W S++ H
Sbjct: 542 TMYAKKGHIESAEEVFKRQR-EKDLVSWNSMISGYAQH 578
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 133/306 (43%), Gaps = 48/306 (15%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDM 62
ER+ TA++ YV+ G + EA +F + K++V+W+ ML G+ + + A ++F
Sbjct: 429 ERSSTVGTALLDAYVKLGKVDEAAKVFSGIDNKDIVAWSAMLAGYAQAGETEAAIKIFSE 488
Query: 63 MPEK-------------DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGY 109
+ + +V A T +G G+ G I + +S + +++ Y
Sbjct: 489 LTKGGVKPNEFTFSSILNVCAATTASMG---QGKQFHGFAIKSRLDSSLCVS-SALLTMY 544
Query: 110 VNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMIL 169
I+ A ++F+ EK+ VSW +M+ GY Q G+ A ++FK M + V + +
Sbjct: 545 AKKGHIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDSVTFI 604
Query: 170 GL----GQNGEVQKARVVFDQM-REKDDATW----SGMIKVYERKGY---ELEVIDLFTL 217
G+ G V++ FD M R+ A S M+ +Y R G ++VID
Sbjct: 605 GVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVID---- 660
Query: 218 MQKEGVRVNFPSLI------SVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITM 271
N P+L ++L+ C + GR + A+ + D +L M
Sbjct: 661 --------NMPNLAGSTIWRTILAACRVHKKTELGR-LAAEKIIAMIPEDSAAYVLLSNM 711
Query: 272 YIKCGE 277
Y + G+
Sbjct: 712 YAESGD 717
>gi|359496846|ref|XP_002272372.2| PREDICTED: uncharacterized protein LOC100258406 [Vitis vinifera]
Length = 1286
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 220/596 (36%), Positives = 340/596 (57%), Gaps = 52/596 (8%)
Query: 47 FIRDSRIDDARRLF--DMMPEKDVVAQTNMV---------LGYCQDGRVDEGREIFDEMP 95
+R S+ D L+ D++ +V N+ LG + GR+ +
Sbjct: 60 LLRKSQSDGGTGLYALDLIQRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFL 119
Query: 96 KKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKA 155
+++ +++ Y +D AR++F+ MP K+ V+WTA++ G++Q R +DA LF
Sbjct: 120 DNHLVLQNIIVNMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQ 179
Query: 156 M--------------------------P-------------MKSVVASNSMILGLGQNGE 176
M P SV ++++ + G
Sbjct: 180 MLRLGFQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGH 239
Query: 177 VQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSV 236
+ A++ FD M K + +W+ +I + RKG + L MQ++ + + SVLS
Sbjct: 240 MDAAQLAFDGMPTKSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVLSA 299
Query: 237 CASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMW 296
CAS+ +L+ G+ VHA +++ + ++ + L+ MY K G + K +FD D+V W
Sbjct: 300 CASIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSW 359
Query: 297 NSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKS 356
N++++G AQ+GLG+++L F +M G+ P++++ + VL+ACS++G + EG FE MK
Sbjct: 360 NTMLTGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFELMK- 418
Query: 357 KYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAE 416
KY VEP HY VDLLGR G ++ A + I MP EP A +WG+LLGACR H ++L
Sbjct: 419 KYKVEPDVPHYVTFVDLLGRVGLLDRAERFIREMPIEPTAAVWGALLGACRMHKNMELGV 478
Query: 417 VAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKV 476
AA++ +L+P ++GP +LLSNIYAS GR+ DVA++RK M++ V K P CSW+E+E V
Sbjct: 479 YAAERAFELDPHDSGPRMLLSNIYASAGRWRDVAKVRKMMKESGVKKQPACSWVEIENAV 538
Query: 477 HMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKL 536
H+F D +HP I E+I G ++E GY PD+S VL VD++E+ L+YHSEKL
Sbjct: 539 HLFVAND-ETHPRIKEIRGKWEEISGKIKEIGYVPDTSHVLLFVDQQEREEKLQYHSEKL 597
Query: 537 AVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDG 592
A+A+ L+ P G PIR+ KN+RVCGDCH+AIK +SKV+ REII+RD NRFH F+DG
Sbjct: 598 ALAFALLNTPTGSPIRIKKNIRVCGDCHAAIKFVSKVVDREIIVRDTNRFHRFRDG 653
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 127/291 (43%), Gaps = 47/291 (16%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDM 62
+ ++V +V Y + G + +A +F +MP K++V+WT ++ GF +++R DA LF
Sbjct: 120 DNHLVLQNIIVNMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQ 179
Query: 63 M--------------------------PEKDVVA-------QTNMVLG------YCQDGR 83
M P + A Q+++ +G Y + G
Sbjct: 180 MLRLGFQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGH 239
Query: 84 VDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKN----EVSWTAMLMG 139
+D + FD MP K+ +SW +ISG+ + A L M KN +++++L
Sbjct: 240 MDAAQLAFDGMPTKSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVLSA 299
Query: 140 YTQCGRI-QDAW---ELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATW 195
G + Q W + K+ N+++ + G + A+ VFD++ + D +W
Sbjct: 300 CASIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSW 359
Query: 196 SGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHG 246
+ M+ + G E +D F M + G+ N S + VL+ C+ LD G
Sbjct: 360 NTMLTGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEG 410
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 80/168 (47%), Gaps = 12/168 (7%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV----VSWTVMLGGFIRDSRIDDA 56
MP ++ VSW A++ G+ +G A L W+M KN +++ +L ++
Sbjct: 250 MPTKSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVLSACASIGALEQG 309
Query: 57 RRLFDMMPE---KDVVAQTNMVLG-YCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+ + M + K + N +L Y + G +D+ + +FD + K +V+SW TM++G +
Sbjct: 310 KWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQH 369
Query: 113 ----NRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAM 156
+D ++ + E NE+S+ +L + G + + F+ M
Sbjct: 370 GLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFELM 417
>gi|359495515|ref|XP_002265720.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g25060, mitochondrial-like [Vitis vinifera]
Length = 678
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 229/615 (37%), Positives = 356/615 (57%), Gaps = 18/615 (2%)
Query: 2 PERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV----VSWTVMLGGFIRDSRIDDA- 56
P+ V +W AM+ Y G + EA +L+ +M + V ++TV+L R +
Sbjct: 66 PQCGVDAWNAMIIAYSRRGAMFEALSLYHRMASEGVRPDSSTYTVVLKACTRSLDLRSGE 125
Query: 57 ---RRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNN 113
R+ D DV ++ Y + G++DE +FD+M +++++ WTTMI+G N
Sbjct: 126 ETWRQAVDQGYGDDVFVGAAVLNLYAKCGKMDEAMRVFDKMGRRDLVCWTTMITGLAQNG 185
Query: 114 R----IDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKS----VVASN 165
+ +D+ R++ + E + V ++ T G + + M K V+
Sbjct: 186 QAREAVDIYRQMHKKRVEGDGVVMLGLIQACTTLGHSKMGLSIHGYMIRKDIIMDVIVQT 245
Query: 166 SMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRV 225
S++ +NG ++ A VF +M K+ +WS +I + + G+ + L MQ G +
Sbjct: 246 SLVDMYAKNGHLELASCVFRRMLYKNVISWSALISGFAQNGFAGNALQLVVDMQSFGYKP 305
Query: 226 NFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIF 285
+ SL+SVL C+ + L G+ VH +VR + D ++ +I MY KCG L + +F
Sbjct: 306 DSVSLVSVLLACSQVGFLKLGKSVHGYIVR-RLHFDCVSSTAVIDMYSKCGSLSFARTVF 364
Query: 286 DNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVK 345
D + +D + WN+II+ Y +G GE++L +F +M + V PD T +LSA S++G V+
Sbjct: 365 DQISFRDSISWNAIIASYGIHGSGEEALSLFLQMRETNVKPDHATFASLLSAFSHSGLVE 424
Query: 346 EGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
+GR F M ++Y ++P +HYACMVDLL RAG+VE+A +LIE+M EP IW +LL
Sbjct: 425 KGRYWFSIMVNEYKIQPSEKHYACMVDLLSRAGRVEEAQELIESMITEPGIAIWVALLSG 484
Query: 406 CRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPP 465
C H K + E+AAKK+L+L P + G Y L+SN +A+ R+ +VAE+RK M+K + K P
Sbjct: 485 CLNHGKFLIGEMAAKKVLELNPDDPGIYSLVSNFFATARRWDEVAEVRKIMKKTGMKKVP 544
Query: 466 GCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEK 525
G S +EV K+H F D SH ++ IM++L K+ ++ GY P + FVLH+++EE K
Sbjct: 545 GYSVMEVNGKLHAFLMED-KSHHQYEEIMQVLGKLDYEMKAMGYVPKTEFVLHNLEEEVK 603
Query: 526 VHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANR 585
L HSE+LA+A+GL+ G + + KNLRVCGDCH A K ISK++ REI++RD R
Sbjct: 604 ERMLCNHSERLAIAFGLLNTGPGTRLLITKNLRVCGDCHEATKFISKIVNREIVVRDVKR 663
Query: 586 FHHFKDGLCSCRDYW 600
FHHFKDG+CSC DYW
Sbjct: 664 FHHFKDGVCSCGDYW 678
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 95/376 (25%), Positives = 178/376 (47%), Gaps = 24/376 (6%)
Query: 70 AQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEK- 128
+ ++ Y + G ++ R++FD+ P+ V +W MI Y + A L+ M +
Sbjct: 41 SNAKLIQSYARLGHIESARQVFDKSPQCGVDAWNAMIIAYSRRGAMFEALSLYHRMASEG 100
Query: 129 ---NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSV---VASNSMILGL-GQNGEVQKAR 181
+ ++T +L T+ ++ E ++ + V + +L L + G++ +A
Sbjct: 101 VRPDSSTYTVVLKACTRSLDLRSGEETWRQAVDQGYGDDVFVGAAVLNLYAKCGKMDEAM 160
Query: 182 VVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLA 241
VFD+M +D W+ MI + G E +D++ M K+ V + ++ ++ C +L
Sbjct: 161 RVFDKMGRRDLVCWTTMITGLAQNGQAREAVDIYRQMHKKRVEGDGVVMLGLIQACTTLG 220
Query: 242 SLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIIS 301
G +H ++R +DV V + L+ MY K G L +F K+++ W+++IS
Sbjct: 221 HSKMGLSIHGYMIRKDIIMDVIVQTSLVDMYAKNGHLELASCVFRRMLYKNVISWSALIS 280
Query: 302 GYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVE 361
G+AQ G +L++ +M S G PD V+LV VL ACS G +K G+ + Y+V
Sbjct: 281 GFAQNGFAGNALQLVVDMQSFGYKPDSVSLVSVLLACSQVGFLKLGKSV-----HGYIV- 334
Query: 362 PKTEHYAC-----MVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAE 416
+ H+ C ++D+ + G + A + + + F D+I W +++ + H E
Sbjct: 335 -RRLHFDCVSSTAVIDMYSKCGSLSFARTVFDQISFR-DSISWNAIIASYGIHGS---GE 389
Query: 417 VAAKKLLQLEPKNAGP 432
A LQ+ N P
Sbjct: 390 EALSLFLQMRETNVKP 405
>gi|224124674|ref|XP_002330082.1| predicted protein [Populus trichocarpa]
gi|222871507|gb|EEF08638.1| predicted protein [Populus trichocarpa]
Length = 665
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 216/495 (43%), Positives = 319/495 (64%), Gaps = 1/495 (0%)
Query: 106 ISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASN 165
I Y + ++ AR++ + + + AM+ GY +CG ++ A ELF +M K+V + N
Sbjct: 172 IQMYGSFGEVEGARRMLGEDGNSDVICFNAMIDGYLKCGEVEAAKELFWSMEDKNVGSWN 231
Query: 166 SMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRV 225
M+ G+ + G +++AR +F++M+EK++ +WS MI Y + GY E +++F +MQ+E +R
Sbjct: 232 VMVSGMAKCGMIEEARELFNEMKEKNEISWSAMIDGYIKGGYYKEALEVFNVMQREEIRP 291
Query: 226 NFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIF 285
L SVL+ CA+L +LD GR +HA + D + + L+ MY KCG L +F
Sbjct: 292 RKFVLSSVLAACANLGALDQGRWIHAYVNNNSNSFDAVLGTALVDMYAKCGRLDMAWDVF 351
Query: 286 DNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVK 345
+ K++ WN++I G +G E ++++F +M P+ +TL+GVLSAC+++G V
Sbjct: 352 EKMEKKEVFTWNAMICGLGMHGRAEDAIELFFKMQKQKFRPNGITLLGVLSACAHSGMVD 411
Query: 346 EGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
EG IF SM+ Y +EP EHY C+VDLLGRAG + +A +++ +MP EP A +WG+LLGA
Sbjct: 412 EGLRIFNSMEEVYGIEPGMEHYGCVVDLLGRAGLLGEAEEVMYSMPMEPSAAVWGALLGA 471
Query: 406 CRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPP 465
CR H ++L E K LL+LEP+N+G Y LLSNIYA GR+ DVA +RK M++R V
Sbjct: 472 CRKHGDVELGERVGKILLELEPQNSGRYALLSNIYARAGRWDDVANVRKLMKERGVKTST 531
Query: 466 GCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEK 525
G S I+ + VH F D SHP+ I ML+ + L+ G+ P++S VL D++EEEK
Sbjct: 532 GISMIDFDGVVHEFKMGDG-SHPQMKNIYLMLKNMIKRLKMEGFSPNTSQVLFDIEEEEK 590
Query: 526 VHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANR 585
L+YHSEKLA+A+GL+ G I V+KNLR+C DCHSA KLIS+V REII+RD R
Sbjct: 591 EAELQYHSEKLAIAFGLINTKPGTTIHVVKNLRMCEDCHSAFKLISQVYDREIIVRDRAR 650
Query: 586 FHHFKDGLCSCRDYW 600
+HHFK G CSC+D+W
Sbjct: 651 YHHFKTGTCSCKDFW 665
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 79/255 (30%), Positives = 127/255 (49%), Gaps = 43/255 (16%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMP 64
+V+ + AM+ GY++ G + A LFW M +KNV SW VM+ G + I++AR LF+ M
Sbjct: 195 DVICFNAMIDGYLKCGEVEAAKELFWSMEDKNVGSWNVMVSGMAKCGMIEEARELFNEMK 254
Query: 65 EKDVVAQTNMVLGYCQDGRVDEGREIFDEM------PKKNVISWTTMISGYVNNNRIDVA 118
EK+ ++ + M+ GY + G E E+F+ M P+K V+S ++++ N +D
Sbjct: 255 EKNEISWSAMIDGYIKGGYYKEALEVFNVMQREEIRPRKFVLS--SVLAACANLGALDQG 312
Query: 119 RKLFEVMPEKNE----VSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQN 174
R + + + V TA++ Y +CGR+ AW++F+ M K V N+MI GLG +
Sbjct: 313 RWIHAYVNNNSNSFDAVLGTALVDMYAKCGRLDMAWDVFEKMEKKEVFTWNAMICGLGMH 372
Query: 175 GEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVL 234
G + A I+LF MQK+ R N +L+ VL
Sbjct: 373 GRAEDA-------------------------------IELFFKMQKQKFRPNGITLLGVL 401
Query: 235 SVCASLASLDHGRQV 249
S CA +D G ++
Sbjct: 402 SACAHSGMVDEGLRI 416
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/318 (22%), Positives = 133/318 (41%), Gaps = 44/318 (13%)
Query: 149 AWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYE 208
A ++F+ +P +V N +I G QN E KA + +M
Sbjct: 83 ALKVFEYVPNPNVFVFNIIIKGCLQNNEPCKAICCYYKM--------------------- 121
Query: 209 LEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVL 268
+ + +P+L C + + + G QVHA +++ DV++ S
Sbjct: 122 -------MIAHARPNKFTYPTL---FKACTAAEAAEEGVQVHAHVIKQGLSGDVHIRSAG 171
Query: 269 ITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDD 328
I MY GE+ + + + D++ +N++I GY + G E + ++F M V +
Sbjct: 172 IQMYGSFGEVEGARRMLGEDGNSDVICFNAMIDGYLKCGEVEAAKELFWSMEDKNVGSWN 231
Query: 329 VTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIE 388
V + G ++ C G ++E RE+F MK K + ++ M+D + G ++A+++
Sbjct: 232 VMVSG-MAKC---GMIEEARELFNEMKEKNEIS-----WSAMIDGYIKGGYYKEALEVFN 282
Query: 389 AMPFE---PDAIIWGSLLGACRTHMKLDLAE-VAAKKLLQLEPKNAGPYILLSNIYASQG 444
M E P + S+L AC LD + A +A L ++YA G
Sbjct: 283 VMQREEIRPRKFVLSSVLAACANLGALDQGRWIHAYVNNNSNSFDAVLGTALVDMYAKCG 342
Query: 445 RFHDVAELRKNMRKRNVI 462
R ++ + M K+ V
Sbjct: 343 RLDMAWDVFEKMEKKEVF 360
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 115/258 (44%), Gaps = 9/258 (3%)
Query: 207 YELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVAS 266
Y L D F+ K +++ +++ +L+ +S SL H +QVHA +R D YV+
Sbjct: 9 YHLASKD-FSTENKFTSQLSQKTILDLLNTKSS-TSLHHLKQVHAVALRTGHFQDHYVSG 66
Query: 267 VLITMYIK--CGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGV 324
L+ Y L +F+ + ++ ++N II G Q K++ +++M +
Sbjct: 67 TLVKCYANPHFSNLNFALKVFEYVPNPNVFVFNIIIKGCLQNNEPCKAICCYYKMMIAHA 126
Query: 325 MPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAM 384
P+ T + AC+ +EG ++ + + L + + + G G+VE A
Sbjct: 127 RPNKFTYPTLFKACTAAEAAEEGVQVHAHVIKQGL-SGDVHIRSAGIQMYGSFGEVEGAR 185
Query: 385 KLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQG 444
+++ D I + +++ ++K E A + +E KN G + ++ + A G
Sbjct: 186 RML-GEDGNSDVICFNAMIDG---YLKCGEVEAAKELFWSMEDKNVGSWNVMVSGMAKCG 241
Query: 445 RFHDVAELRKNMRKRNVI 462
+ EL M+++N I
Sbjct: 242 MIEEARELFNEMKEKNEI 259
>gi|224115100|ref|XP_002332237.1| predicted protein [Populus trichocarpa]
gi|222831850|gb|EEE70327.1| predicted protein [Populus trichocarpa]
Length = 444
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 204/445 (45%), Positives = 289/445 (64%), Gaps = 1/445 (0%)
Query: 156 MPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLF 215
MP KS+V+ +MI + G + +ARV+FD + E+D W+ MI Y + G E + LF
Sbjct: 1 MPEKSLVSLTAMITCYAKYGMIDEARVLFDGLEERDAICWNVMIDGYAQHGLPNEGLLLF 60
Query: 216 TLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKC 275
M VR N ++++VLS C +L+ GR VH+ + ++V V + LI MY KC
Sbjct: 61 RQMLNAKVRPNEVTVLAVLSACGQTGALETGRWVHSYIENNGIGINVRVGTSLIDMYSKC 120
Query: 276 GELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVL 335
G L +L+F+ ++KD+V WNS++ GYA +G + +L++F EM G P D+T +GVL
Sbjct: 121 GSLEDARLVFERISNKDVVAWNSMVVGYAMHGFSQDALRLFKEMCMIGYQPTDITFIGVL 180
Query: 336 SACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPD 395
+ACS+ G V EG + F SMK +Y +EPK EHY CMV+LLGRAG +E+A +L++ M + D
Sbjct: 181 NACSHAGLVSEGWKFFYSMKDEYGIEPKVEHYGCMVNLLGRAGYLEEAYELVKNMEIDQD 240
Query: 396 AIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKN 455
++WG+LLGACR H + L E A+ L+ N+G Y+LLSNIYA+ G + VA +R
Sbjct: 241 PVLWGTLLGACRLHGNIALGEQIAEYLVSQNLANSGTYVLLSNIYAAAGNWEGVARVRTL 300
Query: 456 MRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSF 515
M++ K PGCS IEV KVH F D + HP+ I MLE+I G L+ GY P +
Sbjct: 301 MKESGFEKEPGCSSIEVNNKVHEFLAGD-LRHPKSREIYEMLEEINGWLKTHGYTPQTDI 359
Query: 516 VLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMG 575
VLHD+++ +K SL HSEKLA+A+GL+ G I+++KNLRVC DCH+ KLISK+ G
Sbjct: 360 VLHDLEDAQKERSLGVHSEKLALAFGLITTKPGTTIKIVKNLRVCADCHAVTKLISKITG 419
Query: 576 REIILRDANRFHHFKDGLCSCRDYW 600
R++++RD NRFHHF +GLCSC DYW
Sbjct: 420 RKVVMRDRNRFHHFVNGLCSCGDYW 444
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 122/271 (45%), Gaps = 20/271 (7%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MPE+++VS TAM+ Y + GMI EA LF + E++ + W VM+ G+ + ++ LF
Sbjct: 1 MPEKSLVSLTAMITCYAKYGMIDEARVLFDGLEERDAICWNVMIDGYAQHGLPNEGLLLF 60
Query: 61 DMMPEKDVVAQTNMVLGYC----QDGRVDEGREIFDEMPKK----NVISWTTMISGYVNN 112
M V VL Q G ++ GR + + NV T++I Y
Sbjct: 61 RQMLNAKVRPNEVTVLAVLSACGQTGALETGRWVHSYIENNGIGINVRVGTSLIDMYSKC 120
Query: 113 NRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGL- 171
++ AR +FE + K+ V+W +M++GY G QDA LFK M M ++ +G+
Sbjct: 121 GSLEDARLVFERISNKDVVAWNSMVVGYAMHGFSQDALRLFKEMCMIGYQPTDITFIGVL 180
Query: 172 ---GQNGEVQKARVVFDQMR-----EKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGV 223
G V + F M+ E + M+ + R GY E +L M+ +
Sbjct: 181 NACSHAGLVSEGWKFFYSMKDEYGIEPKVEHYGCMVNLLGRAGYLEEAYELVKNMEIDQD 240
Query: 224 RVNFPSLISVLSVCASLASLDHGRQVHAQLV 254
V + +L L C ++ G Q+ LV
Sbjct: 241 PVLWGTL---LGACRLHGNIALGEQIAEYLV 268
>gi|222617563|gb|EEE53695.1| hypothetical protein OsJ_00010 [Oryza sativa Japonica Group]
Length = 1008
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 241/700 (34%), Positives = 369/700 (52%), Gaps = 107/700 (15%)
Query: 2 PERNVVSWTAMVRGYVEEGMITEAGTLFWQM------PEKNVVSWTVMLGG--------- 46
P RN +WT M+R + G ++A +LF M P++ V+ + L G
Sbjct: 315 PHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPDRVTVTTVLNLPGCTVPSLHPF 374
Query: 47 ----------FIRDSRIDD---------ARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEG 87
F+ ++ +D ARR+F M +KD V M++G ++G +
Sbjct: 375 AIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQA 434
Query: 88 REIFDEMPKK-------NVISW-------TTMISGYVNNNRIDV---------ARKLFEV 124
++F M + +++ + T++++ +VNN+ +D R+LF+
Sbjct: 435 LQLFAAMRRAGYSRHPLHLLQYSHSRSRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDE 494
Query: 125 MPEKNEVSWTAMLMGY--TQCGRIQDAWELFKAM-------------PMKSVVAS----- 164
MPE++ VS+ ++ Y QC LF+ M M SV S
Sbjct: 495 MPERDNVSYNVIIAAYAWNQCA--ATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVH 552
Query: 165 ---------------------NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYE 203
N++I + G + A+ F EK +W+ +I Y
Sbjct: 553 IGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYV 612
Query: 204 RKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVY 263
+ G E + LF+ M++ G+R + + S++ +SLA + GRQ+H+ L+R + V+
Sbjct: 613 QNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVF 672
Query: 264 VASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSG 323
SVL+ MY KCG L + FD ++ + WN++IS YA YG + ++K+F M G
Sbjct: 673 SGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCG 732
Query: 324 VMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDA 383
PD VT + VL+ACS+ G E + F MK +Y + P EHYAC++D LGR G
Sbjct: 733 FNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQV 792
Query: 384 MKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQ 443
K++ MPF+ D IIW S+L +CR H +LA VAA KL +EP +A PY++LSNIYA
Sbjct: 793 QKMLVEMPFKADPIIWTSILHSCRIHGNQELARVAADKLFGMEPTDATPYVILSNIYARA 852
Query: 444 GRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGL 503
G++ D A ++K MR R V K G SW+E+++K++ F D S PMI + +++ L
Sbjct: 853 GQWEDAACVKKIMRDRGVRKESGYSWVEIKQKIYSFASNDLTS----PMIDEIKDELDRL 908
Query: 504 LRE---AGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVC 560
+E GY PD + LH VD E K+ SL+YHSE+LA+A+ L+ P G PIR+MKNL C
Sbjct: 909 YKEMDKQGYKPDITCALHMVDHELKLESLKYHSERLAIAFALMNTPAGTPIRIMKNLTAC 968
Query: 561 GDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
DCH+ IK+ISK++ R+II+RD+ RFHHFKDG+CSC DYW
Sbjct: 969 LDCHAVIKMISKIVNRDIIVRDSRRFHHFKDGVCSCGDYW 1008
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 118/435 (27%), Positives = 205/435 (47%), Gaps = 36/435 (8%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MP +N+ S ++ Y G + A LF P +N +WT+M+ R DA LF
Sbjct: 283 MPHKNIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLF 342
Query: 61 DMM------PEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNR 114
M P++ V T + L C + F +V T++ Y +
Sbjct: 343 RAMLGEGVIPDR-VTVTTVLNLPGCTVPSLHPFAIKFGL--DTHVFVCNTLLDAYCKHGL 399
Query: 115 IDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAM--------PMK------- 159
+ AR++F M +K+ V++ AM+MG ++ G A +LF AM P+
Sbjct: 400 LAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGYSRHPLHLLQYSHS 459
Query: 160 --------SVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEV 211
+V +NS++ + + R +FD+M E+D+ +++ +I Y V
Sbjct: 460 RSRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATV 519
Query: 212 IDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITM 271
+ LF MQK G ++LSV SL + G+Q+HAQLV + + + LI M
Sbjct: 520 LRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDM 579
Query: 272 YIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTL 331
Y KCG L K F N + K + W ++I+GY Q G E++L++F +M +G+ PD T
Sbjct: 580 YSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATF 639
Query: 332 VGVLSACSYTGKVKEGREIFESM-KSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAM 390
++ A S + GR++ + +S Y + + +VD+ + G +++A++ + M
Sbjct: 640 SSIIKASSSLAMIGLGRQLHSYLIRSGY--KSSVFSGSVLVDMYAKCGCLDEALRTFDEM 697
Query: 391 PFEPDAIIWGSLLGA 405
P E ++I W +++ A
Sbjct: 698 P-ERNSISWNAVISA 711
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 89/376 (23%), Positives = 156/376 (41%), Gaps = 29/376 (7%)
Query: 36 NVVSWTVMLG--GFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDE 93
+V+++ + LG + + AR +FD MP K++ + ++ Y G + + +F
Sbjct: 254 DVLTYRLNLGLRSLLSSGHLHRARAMFDQMPHKNIFSLNLILSAYSSSGDLPAAQHLFLS 313
Query: 94 MPKKNVISWTTMISGYVNNNRIDVARKLFEVM------PEKNEVSWTAMLMGYTQCGRIQ 147
P +N +WT M+ + R A LF M P++ V+ L G T
Sbjct: 314 SPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPDRVTVTTVLNLPGCTVPSLHP 373
Query: 148 DAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGY 207
A K V N+++ ++G + AR VF +M +KD T++ M+ ++G
Sbjct: 374 FA---IKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGL 430
Query: 208 ELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASV 267
+ + LF M++ G + L+ H R R ++V+V +
Sbjct: 431 HTQALQLFAAMRRAGYSRHPLHLLQY----------SHSRS------RSTSVLNVFVNNS 474
Query: 268 LITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPD 327
L+ Y KC L + +FD +D V +N II+ YA L++F EM G
Sbjct: 475 LLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQ 534
Query: 328 DVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLI 387
+ +LS V G++I + L A ++D+ + G + DA K
Sbjct: 535 VLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNA-LIDMYSKCGML-DAAKSN 592
Query: 388 EAMPFEPDAIIWGSLL 403
+ E AI W +L+
Sbjct: 593 FSNRSEKSAISWTALI 608
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 101/441 (22%), Positives = 177/441 (40%), Gaps = 109/441 (24%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSW--------------TVMLGG 46
M +++ V++ AM+ G +EG+ T+A LF M T +L
Sbjct: 410 MHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGYSRHPLHLLQYSHSRSRSTSVLNV 469
Query: 47 FIRDSR---------IDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPK- 96
F+ +S +DD RRLFD MPE+D V+ ++ Y + +F EM K
Sbjct: 470 FVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKL 529
Query: 97 ---KNVISWTTMIS-----------------------------------GYVNNNRIDVA 118
+ V+ + TM+S Y +D A
Sbjct: 530 GFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAA 589
Query: 119 RKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAM----------PMKSVVASNSMI 168
+ F EK+ +SWTA++ GY Q G+ ++A +LF M S++ ++S +
Sbjct: 590 KSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSL 649
Query: 169 --LGLGQN---------------------------GEVQKARVVFDQMREKDDATWSGMI 199
+GLG+ G + +A FD+M E++ +W+ +I
Sbjct: 650 AMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVI 709
Query: 200 KVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFD 259
Y G I +F M G + + +SVL+ C+ D + + L++ Q+
Sbjct: 710 SAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMK-YFHLMKHQYS 768
Query: 260 VDV---YVASVLITM-YIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKV 315
+ + A V+ T+ + C V+ L+ F + D ++W SI+ +G E +
Sbjct: 769 ISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKA-DPIIWTSILHSCRIHGNQELARVA 827
Query: 316 FHEMFSSGVMPDDVTLVGVLS 336
++F G+ P D T +LS
Sbjct: 828 ADKLF--GMEPTDATPYVILS 846
>gi|347954536|gb|AEP33768.1| organelle transcript processing 82, partial [Nasturtium officinale]
Length = 670
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 231/649 (35%), Positives = 358/649 (55%), Gaps = 50/649 (7%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM------PEKNVVSWTVMLGGFIRDSR-- 52
+ E N++ W M RG+ A L+ M P + + ++ S+
Sbjct: 23 IQEPNLLIWNTMFRGHALSPDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKLKASKEG 82
Query: 53 IDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+ + + E D+ T+++ Y Q+ R+++ ++FD ++V+S+T +++GY +
Sbjct: 83 LQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSSHRDVVSYTALVTGYASR 142
Query: 113 NRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMIL--- 169
I+ AR +F+ +P K+ VSW AM+ GY + G ++A ELFK M +V S ++
Sbjct: 143 GYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMKTNVRPDESTMVTVI 202
Query: 170 ----------------------GLGQN--------------GEVQKARVVFDQMREKDDA 193
G G N GE++ A +F + KD
Sbjct: 203 SASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEMETACGLFLGLSYKDVI 262
Query: 194 TWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQL 253
+W+ +I Y E + LF M + G N +++S+L CA L ++D GR +H +
Sbjct: 263 SWNILIGGYTHLNLYKEALLLFQEMLRSGESPNDVTMLSILHACAHLGAIDIGRWIHVYI 322
Query: 254 VRCQFDVD--VYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEK 311
+ V + + LI MY KCG++ +F++ K + WN++I G+A +G
Sbjct: 323 DKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSMLHKSLPAWNAMIFGFAMHGRANA 382
Query: 312 SLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMV 371
+ +F M + + PDD+T VG+LSACS+ G + GR IF SM Y + PK EHY CM+
Sbjct: 383 AFDIFSRMRKNEIKPDDITFVGLLSACSHAGMLDLGRHIFRSMTHNYKITPKLEHYGCMI 442
Query: 372 DLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAG 431
DLLG +G ++A ++I M EPD +IW SLL AC+ H ++L E A+ L ++EP N G
Sbjct: 443 DLLGHSGLFKEAEEMISTMTMEPDGVIWCSLLKACKMHGNVELGEKFAQNLFKIEPNNPG 502
Query: 432 PYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHP 491
Y+LLSNIYA+ GR+++VA +R + + + K PGCS IE++ VH F D HP +
Sbjct: 503 SYVLLSNIYATAGRWNEVARIRGLLNDKGMKKVPGCSSIEIDSVVHEFIIGDKF-HPRNR 561
Query: 492 MIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPI 551
I MLE++ LL+EAG+ PD+S VL +++EE K +LR+HSEKLA+A+GL+ +
Sbjct: 562 EIYGMLEEMEVLLQEAGFVPDTSEVLQEMEEEFKEGALRHHSEKLAIAFGLISTKPETKL 621
Query: 552 RVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
++KNLRVC +CH A KLISK+ REII RD RFHHF+DG+CSC DYW
Sbjct: 622 TIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 670
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 111/466 (23%), Positives = 198/466 (42%), Gaps = 82/466 (17%)
Query: 90 IFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVM------PEKNEVSW---------- 133
+F+ + + N++ W TM G+ + A KL+ M P +
Sbjct: 19 VFETIQEPNLLIWNTMFRGHALSPDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKLKA 78
Query: 134 -----------------------TAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILG 170
T+++ Y Q R++DA ++F + VV+ +++ G
Sbjct: 79 SKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSSHRDVVSYTALVTG 138
Query: 171 LGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSL 230
G ++ AR +FD++ KD +W+ MI Y G E ++LF M K VR + ++
Sbjct: 139 YASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMKTNVRPDESTM 198
Query: 231 ISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFAS 290
++V+S A S++ GRQVH+ + F ++ + + LI Y KCGE+ +F +
Sbjct: 199 VTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEMETACGLFLGLSY 258
Query: 291 KDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREI 350
KD++ WN +I GY L +++L +F EM SG P+DVT++ +L AC++ G + GR I
Sbjct: 259 KDVISWNILIGGYTHLNLYKEALLLFQEMLRSGESPNDVTMLSILHACAHLGAIDIGRWI 318
Query: 351 FESMKSKYL-VEPKTEHYACMVDLLGRAGQVEDAMKLIEAM------------------- 390
+ + V + ++D+ + G +E A ++ +M
Sbjct: 319 HVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSMLHKSLPAWNAMIFGFAMHG 378
Query: 391 ---------------PFEPDAIIWGSLLGACRTHMKLDLAEVAAKKL---LQLEPKNAGP 432
+PD I + LL AC LDL + + ++ PK
Sbjct: 379 RANAAFDIFSRMRKNEIKPDDITFVGLLSACSHAGMLDLGRHIFRSMTHNYKITPK-LEH 437
Query: 433 YILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHM 478
Y + ++ G F + E+ M ++P G W + K M
Sbjct: 438 YGCMIDLLGHSGLFKEAEEMISTM----TMEPDGVIWCSLLKACKM 479
>gi|297835482|ref|XP_002885623.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331463|gb|EFH61882.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 624
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 216/583 (37%), Positives = 340/583 (58%), Gaps = 48/583 (8%)
Query: 57 RRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRID 116
RR ++ + +K V + GR+ G + + + +++ T+++ Y ++
Sbjct: 51 RRFYNTLLKKCTVFKL------LTQGRIVHG-HLIQSIFRHDLVMNNTLLNMYAKCGSLE 103
Query: 117 VARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAM----------PMKSVVAS-- 164
ARK+F+ MPE++ V+WT ++ GY+Q R DA LF M + SV+ +
Sbjct: 104 EARKVFDKMPERDFVTWTTLISGYSQHDRPFDALVLFNQMLRFGFSPNEFTLSSVIKAAA 163
Query: 165 --------------------------NSMILGL-GQNGEVQKARVVFDQMREKDDATWSG 197
S +L L + G + A++VFD + ++D +W+
Sbjct: 164 AERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNA 223
Query: 198 MIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQ 257
+I + R+ + ++LF M +EG R + S S+ C+S L+ G+ VHA +++
Sbjct: 224 LIAGHARRCGTEKALELFQGMLREGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSG 283
Query: 258 FDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFH 317
+ + + L+ MY K G + + IFD A +D+V WNS+++ YAQ+G G +++ F
Sbjct: 284 EKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGNEAVCWFE 343
Query: 318 EMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRA 377
EM G+ P++++ + VL+ACS++G + EG +E MK +V + HY +VDLLGRA
Sbjct: 344 EMRRGGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIV-LEAWHYVTIVDLLGRA 402
Query: 378 GQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLS 437
G + A++ IE MP EP A IW +LL ACR H +L AA+ + +L+P + GP+++L
Sbjct: 403 GDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILY 462
Query: 438 NIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRML 497
NIYAS GR++D A +RK M++ V K P CSW+E+E +HMF D HP+ I R
Sbjct: 463 NIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVAND-ERHPQREEIARKW 521
Query: 498 EKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNL 557
E++ ++E GY PD+S V+ VD++E+ +L+YHSEK+A+A+ L+ P G I + KN+
Sbjct: 522 EEVLAKIKELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNI 581
Query: 558 RVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
RVCGDCHSAIKL SK +GREII+RD NRFHHFKDG CSC+DYW
Sbjct: 582 RVCGDCHSAIKLASKAVGREIIVRDTNRFHHFKDGACSCKDYW 624
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 68/324 (20%), Positives = 149/324 (45%), Gaps = 47/324 (14%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMM- 63
++V ++ Y + G + EA +F +MPE++ V+WT ++ G+ + R DA LF+ M
Sbjct: 85 DLVMNNTLLNMYAKCGSLEEARKVFDKMPERDFVTWTTLISGYSQHDRPFDALVLFNQML 144
Query: 64 -----PEKDVVAQ---------------------------TNMVLG------YCQDGRVD 85
P + ++ +N+ +G Y + G +D
Sbjct: 145 RFGFSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMD 204
Query: 86 EGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEK----NEVSWTAMLMGYT 141
+ + +FD + +N +SW +I+G+ + A +LF+ M + + S+ ++ +
Sbjct: 205 DAQLVFDALESRNDVSWNALIAGHARRCGTEKALELFQGMLREGFRPSHFSYASLFGACS 264
Query: 142 QCGRI-QDAW---ELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSG 197
G + Q W + K+ A N+++ ++G + AR +FD++ ++D +W+
Sbjct: 265 STGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNS 324
Query: 198 MIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQ 257
++ Y + G+ E + F M++ G+R N S +SVL+ C+ LD G + + +
Sbjct: 325 LLTAYAQHGFGNEAVCWFEEMRRGGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDG 384
Query: 258 FDVDVYVASVLITMYIKCGELVKG 281
++ + ++ + + G+L +
Sbjct: 385 IVLEAWHYVTIVDLLGRAGDLNRA 408
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 98/218 (44%), Gaps = 17/218 (7%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV----VSWTVMLGGFIRDSRIDDA 56
+ RN VSW A++ G+ +A LF M + S+ + G ++
Sbjct: 213 LESRNDVSWNALIAGHARRCGTEKALELFQGMLREGFRPSHFSYASLFGACSSTGFLEQG 272
Query: 57 RRLFDMM---PEKDVVAQTNMVLG-YCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+ + M EK V N +L Y + G + + R+IFD + K++V+SW ++++ Y +
Sbjct: 273 KWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQH 332
Query: 113 NRIDVARKLFEVMP----EKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASN--- 165
+ A FE M NE+S+ ++L + G + + W ++ M +V
Sbjct: 333 GFGNEAVCWFEEMRRGGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVLEAWHY 392
Query: 166 -SMILGLGQNGEVQKARVVFDQMR-EKDDATWSGMIKV 201
+++ LG+ G++ +A ++M E A W ++
Sbjct: 393 VTIVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNA 430
>gi|224138422|ref|XP_002322810.1| predicted protein [Populus trichocarpa]
gi|222867440|gb|EEF04571.1| predicted protein [Populus trichocarpa]
Length = 562
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 223/565 (39%), Positives = 346/565 (61%), Gaps = 15/565 (2%)
Query: 47 FIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMI 106
+ + I +A F+ MP +++++ ++ G+ Q G +D ++FDEM ++NV +W M+
Sbjct: 2 YFKMGEIQEAIAFFNAMPMRNIMSHNILINGHVQHGDLDSAIKVFDEMLERNVATWNAMV 61
Query: 107 SGYV----NNNRIDVARKLFEVMPEKNEVSWTAMLMG-----YTQCGRIQDAWELFKAMP 157
SG + N N + + R++ E+ +E + ++L G + G+ A+ L
Sbjct: 62 SGLIQFEFNENGLFLFREMHELGFLPDEFTLGSVLRGCAGLRASYAGKQVHAYVLKYGYE 121
Query: 158 MKSVVASN--SMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLF 215
VV S+ M + G GE +K V MR ++ W+ +I + G+ V+DL+
Sbjct: 122 FNLVVGSSLAHMYMKSGSLGEGEK---VIKAMRIRNVVAWNTLIAGNAQNGHFEGVLDLY 178
Query: 216 TLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKC 275
+M+ G+R + +L+SV+S A LA+L G+Q+HA+ ++ + V V S LI+MY KC
Sbjct: 179 NMMKMSGLRPDKITLVSVISSSAELATLFQGQQIHAEAIKAGANSAVAVLSSLISMYSKC 238
Query: 276 GELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVL 335
G L + D V+W+S+I+ Y +G GE+++ +F +M G+ +DVT + +L
Sbjct: 239 GCLEDSMKALLDCEHPDSVLWSSMIAAYGFHGRGEEAVHLFEQMEQEGLGGNDVTFLSLL 298
Query: 336 SACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPD 395
ACS+ G ++G F+ M KY ++P+ EHY C+VDLLGR+G +++A +I +MP E D
Sbjct: 299 YACSHNGLKEKGMGFFKLMVEKYGLKPRLEHYTCVVDLLGRSGCLDEAEAMIRSMPLEAD 358
Query: 396 AIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKN 455
+IW +LL ACR H D+A A+++L+L P+++ Y+LLSNI+AS R+ DV+++R
Sbjct: 359 VVIWKTLLSACRIHRNADMATRTAEEILRLNPQDSATYVLLSNIHASAKRWKDVSKVRTT 418
Query: 456 MRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSF 515
MR RNV K PG SW+EV+ +V F+ D SHP I L+++ ++ GY PD++
Sbjct: 419 MRDRNVKKEPGVSWLEVKNRVFQFSMGD-KSHPMSEEIDLYLKELMEEMKLRGYVPDTAT 477
Query: 516 VLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMG 575
V HD D EEK +SL HSEKLA+A+GL+ +P G PIRVMKNLR+C DCH AIKLIS +
Sbjct: 478 VFHDTDSEEKENSLVNHSEKLAIAFGLMNIPPGSPIRVMKNLRICSDCHVAIKLISDINN 537
Query: 576 REIILRDANRFHHFKDGLCSCRDYW 600
REII+RD +RFHHFK G CSC DYW
Sbjct: 538 REIIVRDTSRFHHFKHGKCSCGDYW 562
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 123/287 (42%), Gaps = 51/287 (17%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MP RN++S ++ G+V+ G + A +F +M E+NV +W M+ G I+ ++ LF
Sbjct: 18 MPMRNIMSHNILINGHVQHGDLDSAIKVFDEMLERNVATWNAMVSGLIQFEFNENGLFLF 77
Query: 61 DMMPE--------------------------KDVVA-------QTNMVLG------YCQD 81
M E K V A + N+V+G Y +
Sbjct: 78 REMHELGFLPDEFTLGSVLRGCAGLRASYAGKQVHAYVLKYGYEFNLVVGSSLAHMYMKS 137
Query: 82 GRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVM------PEK----NEV 131
G + EG ++ M +NV++W T+I+G N + L+ +M P+K + +
Sbjct: 138 GSLGEGEKVIKAMRIRNVVAWNTLIAGNAQNGHFEGVLDLYNMMKMSGLRPDKITLVSVI 197
Query: 132 SWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKD 191
S +A L Q +I E KA +V +S+I + G ++ + D
Sbjct: 198 SSSAELATLFQGQQIHA--EAIKAGANSAVAVLSSLISMYSKCGCLEDSMKALLDCEHPD 255
Query: 192 DATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCA 238
WS MI Y G E + LF M++EG+ N + +S+L C+
Sbjct: 256 SVLWSSMIAAYGFHGRGEEAVHLFEQMEQEGLGGNDVTFLSLLYACS 302
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 67/166 (40%), Gaps = 33/166 (19%)
Query: 271 MYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYG----------------------- 307
MY K GE+ + F+ ++I+ N +I+G+ Q+G
Sbjct: 1 MYFKMGEIQEAIAFFNAMPMRNIMSHNILINGHVQHGDLDSAIKVFDEMLERNVATWNAM 60
Query: 308 --------LGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYL 359
E L +F EM G +PD+ TL VL C+ G+++ + KY
Sbjct: 61 VSGLIQFEFNENGLFLFREMHELGFLPDEFTLGSVLRGCAGLRASYAGKQV-HAYVLKYG 119
Query: 360 VEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
E + + + ++G + + K+I+AM + + W +L+
Sbjct: 120 YEFNLVVGSSLAHMYMKSGSLGEGEKVIKAMRIR-NVVAWNTLIAG 164
>gi|226505202|ref|NP_001141725.1| uncharacterized protein LOC100273856 [Zea mays]
gi|194705708|gb|ACF86938.1| unknown [Zea mays]
gi|413956425|gb|AFW89074.1| hypothetical protein ZEAMMB73_742653 [Zea mays]
Length = 635
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 221/560 (39%), Positives = 325/560 (58%), Gaps = 13/560 (2%)
Query: 53 IDDARRLFDMMPEKDVVAQTNMVLGYCQDGR-VDEGREIFDEMPKKNVISWTTMISGYVN 111
+ DA L +P DV + +V + R + R +FD MP+++ SW+ ++S +V
Sbjct: 77 LPDALALLSSLPSTDVCSYNTLVAALGRSPRGLASARALFDRMPRRDHFSWSAIVSAHVR 136
Query: 112 NNRIDVARKLFEVMPEK-------NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVAS 164
+ + A ++ M + NE + ++ L T + EL + + + A
Sbjct: 137 HGQPRAALAIYRRMLREPGGSGADNEFTASSALAAATAARCARAGRELHCHVVRRGIDAD 196
Query: 165 NSMILGLG----QNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQK 220
+ L + G + AR VFD+M +D +W+ M+ Y G + E LF M +
Sbjct: 197 AVVWSALADMYAKFGRLDDARSVFDRMPVRDVVSWTAMLDRYFDAGRDGEGFRLFVRMMR 256
Query: 221 EGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVK 280
G+ N + VL CA S G+QVH ++ + + + S L+ MY K G++
Sbjct: 257 SGILPNEFTYAGVLRACAEFTSEKLGKQVHGRMAKSRTGDSCFAGSALVHMYSKYGDMGT 316
Query: 281 GKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSY 340
+F D+V W ++ISGYAQ G +++L F + SSG PD VT VGVLSAC++
Sbjct: 317 AMRVFRGMPKPDLVSWTAMISGYAQNGQPDEALHCFDMLLSSGFRPDHVTFVGVLSACAH 376
Query: 341 TGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWG 400
G V +G IF S+K KY +E +HYAC++DLL R+G E A +I MP +P+ +W
Sbjct: 377 AGLVDKGLGIFHSIKDKYGIEHTADHYACVIDLLSRSGLFERAEDMINTMPVKPNKFLWA 436
Query: 401 SLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRN 460
SLLG CR H + LA AA+ L ++EP+N Y+ L+NIYAS G F +V +R+ M R
Sbjct: 437 SLLGGCRIHKNVRLAWWAAEALFEIEPENPATYVTLANIYASVGLFDEVENMRRTMELRG 496
Query: 461 VIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDV 520
+ K P SWIEV +VH+F D SHP+ I +L+K+ +RE GY D+ FVLHDV
Sbjct: 497 ITKMPASSWIEVGTRVHVFLVGD-KSHPQAEEIYALLKKLYVKMREEGYVADTGFVLHDV 555
Query: 521 DEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIIL 580
++E+K + YHSE+LAVA+G++ P+G PI+V KNLR+CGDCH+ IKLISK++ REII+
Sbjct: 556 EDEQKQQDIGYHSERLAVAFGIIATPKGSPIKVFKNLRICGDCHTTIKLISKIVQREIIV 615
Query: 581 RDANRFHHFKDGLCSCRDYW 600
RD+NRFHHFK+G CSCRDYW
Sbjct: 616 RDSNRFHHFKNGSCSCRDYW 635
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 122/299 (40%), Gaps = 55/299 (18%)
Query: 1 MPERNVVSWTAMVR--GYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARR 58
+P +V S+ +V G G+ + A LF +MP ++ SW+ ++ +R + A
Sbjct: 87 LPSTDVCSYNTLVAALGRSPRGLAS-ARALFDRMPRRDHFSWSAIVSAHVRHGQPRAALA 145
Query: 59 LFDMM---P---------------------------------------EKDVVAQTNMVL 76
++ M P + D V + +
Sbjct: 146 IYRRMLREPGGSGADNEFTASSALAAATAARCARAGRELHCHVVRRGIDADAVVWSALAD 205
Query: 77 GYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEK----NEVS 132
Y + GR+D+ R +FD MP ++V+SWT M+ Y + R +LF M NE +
Sbjct: 206 MYAKFGRLDDARSVFDRMPVRDVVSWTAMLDRYFDAGRDGEGFRLFVRMMRSGILPNEFT 265
Query: 133 WTAMLMGYTQ-----CGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQM 187
+ +L + G+ Q + K+ S A ++++ + G++ A VF M
Sbjct: 266 YAGVLRACAEFTSEKLGK-QVHGRMAKSRTGDSCFAGSALVHMYSKYGDMGTAMRVFRGM 324
Query: 188 REKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHG 246
+ D +W+ MI Y + G E + F ++ G R + + + VLS CA +D G
Sbjct: 325 PKPDLVSWTAMISGYAQNGQPDEALHCFDMLLSSGFRPDHVTFVGVLSACAHAGLVDKG 383
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 93/200 (46%), Gaps = 12/200 (6%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDM 62
+ + V W+A+ Y + G + +A ++F +MP ++VVSWT ML + R + RLF
Sbjct: 194 DADAVVWSALADMYAKFGRLDDARSVFDRMPVRDVVSWTAMLDRYFDAGRDGEGFRLFVR 253
Query: 63 MPEKDVVAQTNM---VLGYCQDGRVDE-GREIFDEMPKK----NVISWTTMISGYVNNNR 114
M ++ VL C + ++ G+++ M K + + + ++ Y
Sbjct: 254 MMRSGILPNEFTYAGVLRACAEFTSEKLGKQVHGRMAKSRTGDSCFAGSALVHMYSKYGD 313
Query: 115 IDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGL--- 171
+ A ++F MP+ + VSWTAM+ GY Q G+ +A F + + +G+
Sbjct: 314 MGTAMRVFRGMPKPDLVSWTAMISGYAQNGQPDEALHCFDMLLSSGFRPDHVTFVGVLSA 373
Query: 172 -GQNGEVQKARVVFDQMREK 190
G V K +F +++K
Sbjct: 374 CAHAGLVDKGLGIFHSIKDK 393
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 114/278 (41%), Gaps = 55/278 (19%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM---P------------------------ 33
MP R+ SW+A+V +V G A ++ +M P
Sbjct: 119 MPRRDHFSWSAIVSAHVRHGQPRAALAIYRRMLREPGGSGADNEFTASSALAAATAARCA 178
Query: 34 ---------------EKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGY 78
+ + V W+ + + + R+DDAR +FD MP +DVV+ T M+ Y
Sbjct: 179 RAGRELHCHVVRRGIDADAVVWSALADMYAKFGRLDDARSVFDRMPVRDVVSWTAMLDRY 238
Query: 79 CQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWT---- 134
GR EG +F M + ++ +G + + KL + + + S T
Sbjct: 239 FDAGRDGEGFRLFVRMMRSGILPNEFTYAGVLRACAEFTSEKLGKQVHGRMAKSRTGDSC 298
Query: 135 ----AMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREK 190
A++ Y++ G + A +F+ MP +V+ +MI G QNG+ +A FD +
Sbjct: 299 FAGSALVHMYSKYGDMGTAMRVFRGMPKPDLVSWTAMISGYAQNGQPDEALHCFDMLLSS 358
Query: 191 ----DDATWSGMIKVYERKGYELEVIDLF-TLMQKEGV 223
D T+ G++ G + + +F ++ K G+
Sbjct: 359 GFRPDHVTFVGVLSACAHAGLVDKGLGIFHSIKDKYGI 396
>gi|296085026|emb|CBI28441.3| unnamed protein product [Vitis vinifera]
Length = 913
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 239/650 (36%), Positives = 366/650 (56%), Gaps = 56/650 (8%)
Query: 4 RNVVSWTAMVRGYVEEGMITEAGTLFWQM----------PEKNVVSWTVMLGGFIRDSRI 53
RN +SW +++ Y G A LF M P ++V+ G R R
Sbjct: 267 RNSISWNSIISVYSRRGDAVSAYDLFSSMQKEGLGFSFKPNDAFSEFSVLEEG-RRKGRE 325
Query: 54 DDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNN 113
A + + + V +V Y + G + + +F+ M +K+ +SW ++ISG N
Sbjct: 326 VHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNE 385
Query: 114 RIDVARKLFEVMPEKNEVSWTAMLMGYTQC-GRIQDAWELFKAM-------------PMK 159
+ A ++F +MPE ++VSW +++ + + A + F M +
Sbjct: 386 CSEDAAEMFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLQMMRGGWGLSRVTFINIL 445
Query: 160 SVVAS--------------------------NSMILGLGQNGEVQKARVVFDQMRE-KDD 192
S V+S N+++ G+ GE+ + +F +M E +D+
Sbjct: 446 SAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDE 505
Query: 193 ATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQ 252
+W+ MI Y + +DL M ++G R++ + ++LS CAS+A+L+ G +VHA
Sbjct: 506 VSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATILSACASVATLERGMEVHAC 565
Query: 253 LVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKS 312
+R + DV V S L+ MY KCG + F+ +++ WNS+ISGYA++G GEK+
Sbjct: 566 GIRACLESDVVVGSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKA 625
Query: 313 LKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVD 372
LK+F M G PD VT VGVLSACS+ G V+EG E F+SM Y + P+ EH++CMVD
Sbjct: 626 LKLFTRMMLDGQPPDHVTFVGVLSACSHVGFVEEGFEHFKSMSEVYRLSPRVEHFSCMVD 685
Query: 373 LLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGAC--RTHMKLDLAEVAAKKLLQLEPKNA 430
LLGRAG++++ I +MP +P+ +IW ++LGAC +L AA+ LL+LEP+NA
Sbjct: 686 LLGRAGKLDEVGDFINSMPMKPNVLIWRTVLGACCRANGRNTELGRRAAEMLLELEPQNA 745
Query: 431 GPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEH 490
Y+LL+N+YAS ++ DVA+ R M++ V K GCSW+ ++ VH+F D + HPE
Sbjct: 746 VNYVLLANMYASGEKWEDVAKARTAMKEAAVKKEAGCSWVTMKDGVHVFVAGDKL-HPEK 804
Query: 491 PMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVP 550
+I L ++ +R+AGY P + + L D++ E K L YHSEK+AVA+ L + +P
Sbjct: 805 DLIYDKLRELNRKMRDAGYIPQTKYALFDLELENKEELLSYHSEKIAVAFVLTR-QSALP 863
Query: 551 IRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
IR+MKNLRVCGDCHSA ISK++GR+I+LRD+NRFHHF+DG CSC DYW
Sbjct: 864 IRIMKNLRVCGDCHSAFGYISKIVGRQIVLRDSNRFHHFEDGKCSCGDYW 913
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 113/463 (24%), Positives = 200/463 (43%), Gaps = 57/463 (12%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIR------DSRID 54
M RN+V+W ++ GY + G EA F M + G +R S
Sbjct: 160 MSNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCK 219
Query: 55 DARRLFDMMPE----KDVVAQTNMV--LGYCQDGRVDEGREIFDEMPKKNVISWTTMISG 108
++ ++ + DVV ++ G C D ++ R +FD + +N ISW ++IS
Sbjct: 220 LGVQIHGLISKTRYGSDVVVCNVLISMYGSCLDS-ANDARSVFDGIGIRNSISWNSIISV 278
Query: 109 YVNNNRIDVARKLFEVMPEK---------------------------------------N 129
Y A LF M ++ N
Sbjct: 279 YSRRGDAVSAYDLFSSMQKEGLGFSFKPNDAFSEFSVLEEGRRKGREVHAHVIRTGLNDN 338
Query: 130 EVSWTAMLMG-YTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMR 188
+V+ L+ Y + G I DA +F+ M K V+ NS+I GL QN + A +F M
Sbjct: 339 KVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAEMFSLMP 398
Query: 189 EKDDATWSGMI-KVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGR 247
E D +W+ +I + + + + + F M + G ++ + I++LS +SL+ +
Sbjct: 399 EYDQVSWNSVIGALSDSEASVSQAVKYFLQMMRGGWGLSRVTFINILSAVSSLSLHEVSH 458
Query: 248 QVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFA-SKDIVMWNSIISGYAQY 306
Q+HA +++ D + + L++ Y KCGE+ + + IF + ++D V WNS+ISGY
Sbjct: 459 QIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHN 518
Query: 307 GLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEH 366
L K++ + M G D T +LSAC+ ++ G E+ + + +E
Sbjct: 519 ELLHKAMDLVWFMMQKGQRLDSFTFATILSACASVATLERGMEV-HACGIRACLESDVVV 577
Query: 367 YACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTH 409
+ +VD+ + G+++ A + E MP + W S++ H
Sbjct: 578 GSALVDMYSKCGRIDYASRFFELMPLR-NVYSWNSMISGYARH 619
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 93/370 (25%), Positives = 154/370 (41%), Gaps = 45/370 (12%)
Query: 78 YCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEK----NEVSW 133
Y + G + +++FDEM +N+++W +ISGY N + D A F M N ++
Sbjct: 144 YVRIGDLGSAQKLFDEMSNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAF 203
Query: 134 TAMLMGYTQCGR------IQDAWELFKAMPMKSVVASNSMILGLGQN-GEVQKARVVFDQ 186
+ L + G +Q + K VV N +I G AR VFD
Sbjct: 204 GSALRACQESGPSGCKLGVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDG 263
Query: 187 MREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHG 246
+ ++ +W+ +I VY R+G + DLF+ MQKEG+ +F + G
Sbjct: 264 IGIRNSISWNSIISVYSRRGDAVSAYDLFSSMQKEGLGFSFKPNDAFSEFSVLEEGRRKG 323
Query: 247 RQVHAQLVRCQF-DVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQ 305
R+VHA ++R D V + + L+ MY K G + +F+ KD V WNS+ISG Q
Sbjct: 324 REVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQ 383
Query: 306 YGLGE--------------------------------KSLKVFHEMFSSGVMPDDVTLVG 333
E +++K F +M G VT +
Sbjct: 384 NECSEDAAEMFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLQMMRGGWGLSRVTFIN 443
Query: 334 VLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFE 393
+LSA S + + E ++ KY + T ++ G+ G++ + K+ M
Sbjct: 444 ILSAVS-SLSLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSET 502
Query: 394 PDAIIWGSLL 403
D + W S++
Sbjct: 503 RDEVSWNSMI 512
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 130/275 (47%), Gaps = 22/275 (8%)
Query: 164 SNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGV 223
SN++I + G++ A+ +FD+M ++ TW+ +I Y + G E F M + G
Sbjct: 137 SNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGF 196
Query: 224 RVNFPSLISVLSVC--ASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVK- 280
N + S L C + + G Q+H + + ++ DV V +VLI+MY C +
Sbjct: 197 IPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSAND 256
Query: 281 GKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGV----MPDDV-TLVGVL 335
+ +FD ++ + WNSIIS Y++ G + +F M G+ P+D + VL
Sbjct: 257 ARSVFDGIGIRNSISWNSIISVYSRRGDAVSAYDLFSSMQKEGLGFSFKPNDAFSEFSVL 316
Query: 336 SACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPD 395
G+ ++GRE+ + L + K +V++ ++G + DA + E M E D
Sbjct: 317 E----EGR-RKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELM-VEKD 370
Query: 396 AIIWGSLLGACRTHMKLDLAEVA--AKKLLQLEPK 428
++ W SL+ LD E + A ++ L P+
Sbjct: 371 SVSWNSLISG------LDQNECSEDAAEMFSLMPE 399
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 66/119 (55%), Gaps = 7/119 (5%)
Query: 226 NFPSLISVL--SVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKL 283
F SLI+ S C+ + R++H Q ++ F ++++++ LI +Y++ G+L +
Sbjct: 101 TFESLINRYQGSCCS-----EEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQK 155
Query: 284 IFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTG 342
+FD +++++V W +ISGY Q G +++ F +M +G +P+ L AC +G
Sbjct: 156 LFDEMSNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESG 214
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 79/178 (44%), Gaps = 19/178 (10%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM-----PEKNVVSWTVMLG----GFIRDS 51
MP RNV SW +M+ GY G +A LF +M P +V V+ GF+ +
Sbjct: 601 MPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVTFVGVLSACSHVGFVEEG 660
Query: 52 --RIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMP-KKNVISWTTMISG 108
++ + P + + +LG + G++DE + + MP K NV+ W T++
Sbjct: 661 FEHFKSMSEVYRLSPRVEHFSCMVDLLG--RAGKLDEVGDFINSMPMKPNVLIWRTVLGA 718
Query: 109 --YVNNNRIDVARKLFEVMPE---KNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSV 161
N ++ R+ E++ E +N V++ + Y + +D + AM +V
Sbjct: 719 CCRANGRNTELGRRAAEMLLELEPQNAVNYVLLANMYASGEKWEDVAKARTAMKEAAV 776
>gi|108862088|gb|ABA96198.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 692
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 219/542 (40%), Positives = 331/542 (61%), Gaps = 19/542 (3%)
Query: 72 TNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVN----NNRIDVARKLFE--VM 125
T+++ Y + G + + +FDEMP + +SWT +I+ Y++ + VAR F +
Sbjct: 157 TSLLTLYARCGLLHRAQRVFDEMPHPSTVSWTALITAYMDAGDLREAVHVARNAFANGMR 216
Query: 126 PEKNEVSWTAMLMGYTQCGRIQD------AWELFKAMPM-KSVVASNSMILGLGQNGEVQ 178
P+ S+TA+ + T C R+ D W + + +SV + + + + GE+
Sbjct: 217 PD----SFTAVRV-LTACARVADLATGETVWRAAEQEGIAQSVFVATAAVDLYVKCGEMA 271
Query: 179 KARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCA 238
KAR VFD+MR+KD W M+ Y G+ E +DLF MQ EGVR + ++ LS C
Sbjct: 272 KAREVFDKMRDKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGVRPDCYAVAGALSACT 331
Query: 239 SLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNS 298
L +LD GRQ + +F + + + LI MY KCG + ++F KDI++WN+
Sbjct: 332 RLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTAEAWVVFQQMRKKDIIVWNA 391
Query: 299 IISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKY 358
+I G G + + + +M SGV +D T +G+L +C++TG +++GR F +M Y
Sbjct: 392 MILGLGMTGHEKTAFTLIGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLY 451
Query: 359 LVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVA 418
+ P+ EHY C+VDLL RAG +++A +LI+ MP +A+I G+LLG C+ H +LAE
Sbjct: 452 HISPRIEHYGCIVDLLSRAGLLQEAHQLIDDMPMPANAVILGALLGGCKIHRNAELAEHV 511
Query: 419 AKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHM 478
+L++LEP N+G Y++LSNIY+++GR+ D A+LR +M+++ V K P CSW+E E KVH
Sbjct: 512 LTQLIRLEPWNSGNYVMLSNIYSNRGRWEDAAKLRLDMKEKGVEKVPACSWVEFEGKVHE 571
Query: 479 FTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAV 538
F D SHP I + L+++G ++ GY P + V+ DV++EEK H+L +HSEKLA+
Sbjct: 572 FRVGD-KSHPLSDQIYKKLDELGLEMKTMGYEPTTEVVMFDVEDEEKEHTLVHHSEKLAI 630
Query: 539 AYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRD 598
A+ L+ G IRV KNLRVC DCH+AIKLIS++ REII+RD NRFH F+DG CSC D
Sbjct: 631 AFNLLVTGPGETIRVTKNLRVCSDCHTAIKLISRITHREIIVRDNNRFHCFRDGSCSCND 690
Query: 599 YW 600
YW
Sbjct: 691 YW 692
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 94/441 (21%), Positives = 166/441 (37%), Gaps = 129/441 (29%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MP + VSWTA++ Y++ G + EA + +N + + F + R+
Sbjct: 179 MPHPSTVSWTALITAYMDAGDLREAVHV-----ARNAFANGMRPDSFTAVRVLTACARVA 233
Query: 61 DMM--------PEKDVVAQTNMVLG-----YCQDGRVDEGREIFDEMPKKNVISWTTMIS 107
D+ E++ +AQ+ V Y + G + + RE+FD+M K+ ++W M+
Sbjct: 234 DLATGETVWRAAEQEGIAQSVFVATAAVDLYVKCGEMAKAREVFDKMRDKDAVAWGAMVG 293
Query: 108 GYVNNNRIDVARKLFEVMPEK--------------------------------------- 128
GY +N A LF M +
Sbjct: 294 GYASNGHPREALDLFLAMQAEGVRPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLD 353
Query: 129 NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMR 188
N V TA++ Y +CG +AW +F+ M K ++ N+MILGLG G + A + Q
Sbjct: 354 NPVLGTALIDMYAKCGSTAEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKTAFTLIGQ-- 411
Query: 189 EKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQ 248
M+K GV++N + I +L C + GR+
Sbjct: 412 -----------------------------MEKSGVKLNDNTFIGLLCSCTHTGLIQDGRR 442
Query: 249 VHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGL 308
+ + +Y S I Y I+ ++ GL
Sbjct: 443 YFHNMTK------LYHISPRIEHY------------------------GCIVDLLSRAGL 472
Query: 309 GEKSLKVFHEMFSSGVMPDDVTLVG-VLSACSYTGKVKEGREIFESMKSKYL-VEP-KTE 365
L+ H++ MP + ++G +L C K+ E+ E + ++ + +EP +
Sbjct: 473 ----LQEAHQLIDDMPMPANAVILGALLGGC----KIHRNAELAEHVLTQLIRLEPWNSG 524
Query: 366 HYACMVDLLGRAGQVEDAMKL 386
+Y + ++ G+ EDA KL
Sbjct: 525 NYVMLSNIYSNRGRWEDAAKL 545
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 93/182 (51%), Gaps = 6/182 (3%)
Query: 228 PSLISVLSVCASLASLDH----GRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKL 283
PS ++ S + L H G Q+HA+ ++ + +V + L+T+Y +CG L + +
Sbjct: 115 PSHLTFPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLTLYARCGLLHRAQR 174
Query: 284 IFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGK 343
+FD V W ++I+ Y G +++ V F++G+ PD T V VL+AC+
Sbjct: 175 VFDEMPHPSTVSWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARVAD 234
Query: 344 VKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
+ G ++ + + + + + A VDL + G++ A ++ + M + DA+ WG+++
Sbjct: 235 LATGETVWRAAEQEGIAQSVFVATAA-VDLYVKCGEMAKAREVFDKMR-DKDAVAWGAMV 292
Query: 404 GA 405
G
Sbjct: 293 GG 294
>gi|356530245|ref|XP_003533693.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
mitochondrial-like [Glycine max]
Length = 581
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 200/518 (38%), Positives = 327/518 (63%), Gaps = 4/518 (0%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDM 62
++NVV+WTAMV GY++ + EA LF++MP +NVVSW M+ G+ R+ A LF
Sbjct: 61 KKNVVTWTAMVNGYIKFNQVKEAERLFYEMPLRNVVSWNTMVDGYARNGLTQQALDLFRR 120
Query: 63 MPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLF 122
MPE++VV+ ++ Q GR+++ + +FD+M ++V+SWTTM++G N R++ AR LF
Sbjct: 121 MPERNVVSWNTIITALVQCGRIEDAQRLFDQMKDRDVVSWTTMVAGLAKNGRVEDARALF 180
Query: 123 EVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARV 182
+ MP +N VSW AM+ GY Q R+ +A +LF+ MP + + + N+MI G QNGE+ +A
Sbjct: 181 DQMPVRNVVSWNAMITGYAQNRRLDEALQLFQRMPERDMPSWNTMITGFIQNGELNRAEK 240
Query: 183 VFDQMREKDDATWSGMIKVYERKGYELEVIDLF-TLMQKEGVRVNFPSLISVLSVCASLA 241
+F +M+EK+ TW+ M+ Y + G E + +F ++ ++ N + ++VL C+ LA
Sbjct: 241 LFGEMQEKNVITWTAMMTGYVQHGLSEEALRVFIKMLATNELKPNTGTFVTVLGACSDLA 300
Query: 242 SLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDN--FASKDIVMWNSI 299
L G+Q+H + + F V S LI MY KCGEL + +FD+ + +D++ WN +
Sbjct: 301 GLTEGQQIHQMISKTVFQDSTCVVSALINMYSKCGELHTARKMFDDGLLSQRDLISWNGM 360
Query: 300 ISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYL 359
I+ YA +G G++++ +F+EM GV +DVT VG+L+ACS+TG V+EG + F+ +
Sbjct: 361 IAAYAHHGYGKEAINLFNEMQELGVCANDVTFVGLLTACSHTGLVEEGFKYFDEILKNRS 420
Query: 360 VEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAA 419
++ + +HYAC+VDL GRAG++++A +IE + E +WG+LL C H D+ ++ A
Sbjct: 421 IQLREDHYACLVDLCGRAGRLKEASNIIEGLGEEVPLTVWGALLAGCNVHGNADIGKLVA 480
Query: 420 KKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMF 479
+K+L++EP+NAG Y LLSN+YAS G++ + A +R M+ + K PGCSWIEV V +F
Sbjct: 481 EKILKIEPQNAGTYSLLSNMYASVGKWKEAANVRMRMKDMGLKKQPGCSWIEVGNTVQVF 540
Query: 480 TGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVL 517
D H ++ + +L + +++AG PD ++
Sbjct: 541 VVGD-KPHSQYEPLGHLLHDLHTKMKKAGDMPDDDLLV 577
Score = 208 bits (530), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 118/364 (32%), Positives = 211/364 (57%), Gaps = 12/364 (3%)
Query: 49 RDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEM-PKKNVISWTTMIS 107
R+ ID AR++F+ MPE+D+ T M+ GY + G + E R++FD KKNV++WT M++
Sbjct: 13 REGEIDYARKVFEEMPERDIGLWTTMITGYLKCGMIREARKLFDRWDAKKNVVTWTAMVN 72
Query: 108 GYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSM 167
GY+ N++ A +LF MP +N VSW M+ GY + G Q A +LF+ MP ++VV+ N++
Sbjct: 73 GYIKFNQVKEAERLFYEMPLRNVVSWNTMVDGYARNGLTQQALDLFRRMPERNVVSWNTI 132
Query: 168 ILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNF 227
I L Q G ++ A+ +FDQM+++D +W+ M+ + G V D L + VR N
Sbjct: 133 ITALVQCGRIEDAQRLFDQMKDRDVVSWTTMVAGLAKNG---RVEDARALFDQMPVR-NV 188
Query: 228 PSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDN 287
S ++++ A LD Q+ ++ + D+ + +IT +I+ GEL + + +F
Sbjct: 189 VSWNAMITGYAQNRRLDEALQLFQRMP----ERDMPSWNTMITGFIQNGELNRAEKLFGE 244
Query: 288 FASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVM-PDDVTLVGVLSACSYTGKVKE 346
K+++ W ++++GY Q+GL E++L+VF +M ++ + P+ T V VL ACS + E
Sbjct: 245 MQEKNVITWTAMMTGYVQHGLSEEALRVFIKMLATNELKPNTGTFVTVLGACSDLAGLTE 304
Query: 347 GREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLI-EAMPFEPDAIIWGSLLGA 405
G++I + M SK + + T + ++++ + G++ A K+ + + + D I W ++ A
Sbjct: 305 GQQIHQ-MISKTVFQDSTCVVSALINMYSKCGELHTARKMFDDGLLSQRDLISWNGMIAA 363
Query: 406 CRTH 409
H
Sbjct: 364 YAHH 367
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 108/373 (28%), Positives = 192/373 (51%), Gaps = 24/373 (6%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
M +R+VVSWT MV G + G + +A LF QMP +NVVSW M+ G+ ++ R+D+A +LF
Sbjct: 152 MKDRDVVSWTTMVAGLAKNGRVEDARALFDQMPVRNVVSWNAMITGYAQNRRLDEALQLF 211
Query: 61 DMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARK 120
MPE+D+ + M+ G+ Q+G ++ ++F EM +KNVI+WT M++GYV + + A +
Sbjct: 212 QRMPERDMPSWNTMITGFIQNGELNRAEKLFGEMQEKNVITWTAMMTGYVQHGLSEEALR 271
Query: 121 LFEVMPEKNE-----------VSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMIL 169
+F M NE + + L G T+ +I + K + S +++I
Sbjct: 272 VFIKMLATNELKPNTGTFVTVLGACSDLAGLTEGQQIHQM--ISKTVFQDSTCVVSALIN 329
Query: 170 GLGQNGEVQKARVVFDQ--MREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNF 227
+ GE+ AR +FD + ++D +W+GMI Y GY E I+LF MQ+ GV N
Sbjct: 330 MYSKCGELHTARKMFDDGLLSQRDLISWNGMIAAYAHHGYGKEAINLFNEMQELGVCAND 389
Query: 228 PSLISVLSVCASLASLDHGRQVHAQLVR---CQFDVDVYVASVLITMYIKCGELVKGKLI 284
+ + +L+ C+ ++ G + ++++ Q D Y + L+ + + G L + I
Sbjct: 390 VTFVGLLTACSHTGLVEEGFKYFDEILKNRSIQLREDHY--ACLVDLCGRAGRLKEASNI 447
Query: 285 FDNFASK-DIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSAC-SYTG 342
+ + + +W ++++G +G + V ++ + P + +LS + G
Sbjct: 448 IEGLGEEVPLTVWGALLAGCNVHGNADIGKLVAEKILK--IEPQNAGTYSLLSNMYASVG 505
Query: 343 KVKEGREIFESMK 355
K KE + MK
Sbjct: 506 KWKEAANVRMRMK 518
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 98/443 (22%), Positives = 180/443 (40%), Gaps = 103/443 (23%)
Query: 165 NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVR 224
N I L + GE+ AR VF++M E+D W+ MI Y + G E LF
Sbjct: 5 NLFISRLCREGEIDYARKVFEEMPERDIGLWTTMITGYLKCGMIREARKLFD-------- 56
Query: 225 VNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLI 284
R +V + ++ YIK ++ + + +
Sbjct: 57 ------------------------------RWDAKKNVVTWTAMVNGYIKFNQVKEAERL 86
Query: 285 FDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKV 344
F +++V WN+++ GYA+ GL +++L +F M V+ + T++ L C G++
Sbjct: 87 FYEMPLRNVVSWNTMVDGYARNGLTQQALDLFRRMPERNVVSWN-TIITALVQC---GRI 142
Query: 345 KEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLG 404
++ + +F+ MK + +V + MV L + G+VEDA L + MP + + W +++
Sbjct: 143 EDAQRLFDQMKDRDVVS-----WTTMVAGLAKNGRVEDARALFDQMPVR-NVVSWNAMIT 196
Query: 405 ACRTHMKLDLAEVAAKKLLQLEPKNAGP-YILLSNIYASQGRFHDVAELRKNMRKRNVIK 463
+ +LD A +L Q P+ P + + + G + +L M+++NVI
Sbjct: 197 GYAQNRRLD----EALQLFQRMPERDMPSWNTMITGFIQNGELNRAEKLFGEMQEKNVI- 251
Query: 464 PPGCSWIEVEKKVHMFTG--RDCVSHPEHPMIMRMLE------KIGGLLREAGYCPDSSF 515
+W M TG + +S + ++ML G + G C D
Sbjct: 252 ----TW------TAMMTGYVQHGLSEEALRVFIKMLATNELKPNTGTFVTVLGACSD--- 298
Query: 516 VLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMG 575
L + E +++H + ++ + + V ++ CG+ H+A K+
Sbjct: 299 -LAGLTEGQQIHQM--------ISKTVFQDSTCVVSALINMYSKCGELHTARKM------ 343
Query: 576 REIILRDANRFHHFKDGLCSCRD 598
F DGL S RD
Sbjct: 344 -------------FDDGLLSQRD 353
>gi|297814916|ref|XP_002875341.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297321179|gb|EFH51600.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 659
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 237/633 (37%), Positives = 353/633 (55%), Gaps = 62/633 (9%)
Query: 27 TLFWQMPEK-NVVSWTVMLGGFIRDSRIDDARRLFDMM------PEKD----VVAQTNMV 75
TLF + +K +V SW ++ R +A R F M P + + + +
Sbjct: 30 TLFNRYVDKTDVFSWNSVIADLARSGDSAEALRAFSSMRKLSLYPTRSSFPCAIKACSSL 89
Query: 76 LGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTA 135
L + + +F + ++ + +I Y +++ ARK+F+ +P++N VSWT+
Sbjct: 90 LDIFSGKQTHQQAFVFGY--QSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTS 147
Query: 136 MLMGYTQCGRIQDAWELFK----------------AMPMKSVVAS--------------- 164
M+ GY G DA LFK +M M SV+++
Sbjct: 148 MIRGYDLNGNALDAVSLFKDLLIEENDDDATMFLDSMGMVSVISACSRVAAKGLTESIHS 207
Query: 165 --------------NSMILGLGQNGE--VQKARVVFDQMREKDDATWSGMIKVYERKGYE 208
N+++ + GE V AR +FDQ+ +KD +++ ++ VY + G
Sbjct: 208 FVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMS 267
Query: 209 LEVIDLFTLMQKEGV-RVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASV 267
E D+F + KE V N +L +VL + +L G+ +H Q++R + DV V +
Sbjct: 268 NEAFDVFRRLIKEKVVTFNCITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTS 327
Query: 268 LITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPD 327
+I MY KCG + +L FD +K++ W ++I+GY +G K+L++F M SGV P+
Sbjct: 328 IIDMYCKCGRVETARLAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPN 387
Query: 328 DVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLI 387
+T V VL+ACS+ G G F +MK ++ VEP EHY CMVDLLGRAG ++ A LI
Sbjct: 388 YITFVSVLAACSHAGLHDVGWHWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLI 447
Query: 388 EAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFH 447
+ M EPD+IIW SLL ACR H ++LAE++ +L +L+P N G Y+LLS+IYA GR+
Sbjct: 448 QKMKMEPDSIIWSSLLAACRIHKNVELAEISVARLFELDPSNCGYYMLLSHIYADSGRWK 507
Query: 448 DVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREA 507
DV +R M+ R ++KPPG S +E+ +VH+F D HP+ I L ++ L EA
Sbjct: 508 DVERVRMTMKNRGLVKPPGFSLLELNGEVHVFLIGD-EEHPQREKIYEFLAELNRKLLEA 566
Query: 508 GYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAI 567
GY ++S V HDVDEEEK +LR HSEKLA+A+G++ G + V+KNLRVC DCH+ I
Sbjct: 567 GYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVI 626
Query: 568 KLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
KLISK++ RE ++RDA RFHHFKDG CSC DYW
Sbjct: 627 KLISKIVDREFVVRDAKRFHHFKDGFCSCGDYW 659
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 92/412 (22%), Positives = 176/412 (42%), Gaps = 74/412 (17%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
+P+RN+VSWT+M+RGY G +A +LF + + + DDA
Sbjct: 137 IPKRNIVSWTSMIRGYDLNGNALDAVSLFKDL---------------LIEENDDDATMFL 181
Query: 61 DMMPEKDVVAQTNMVL--GYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNR--ID 116
D M V++ + V G + + FD + V T++ Y +
Sbjct: 182 DSMGMVSVISACSRVAAKGLTESIHSFVIKRGFD----RGVSVGNTLLDAYAKGGEGGVA 237
Query: 117 VARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASN-----SMILGL 171
VARK+F+ + +K+ VS+ +++ Y Q G +A+++F+ + + VV N +++L +
Sbjct: 238 VARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFDVFRRLIKEKVVTFNCITLSTVLLAV 297
Query: 172 GQNGEVQKARVVFDQ-----------------------------------MREKDDATWS 196
+G ++ + + DQ M+ K+ +W+
Sbjct: 298 SHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARLAFDRMKNKNVRSWT 357
Query: 197 GMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHG-RQVHAQLVR 255
MI Y G+ + ++LF M GVR N+ + +SVL+ C+ D G +A R
Sbjct: 358 AMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHDVGWHWFNAMKGR 417
Query: 256 CQFDVDVYVASVLITMYIKCGELVKG-KLIFDNFASKDIVMWNSIISG---YAQYGLGEK 311
+ + ++ + + G L K LI D ++W+S+++ + L E
Sbjct: 418 FGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQKMKMEPDSIIWSSLLAACRIHKNVELAEI 477
Query: 312 SLKVFHEMFSSGVMPDDVTLVGVLSAC-SYTGKVKEGREIFESMKSKYLVEP 362
S+ E+ P + +LS + +G+ K+ + +MK++ LV+P
Sbjct: 478 SVARLFEL-----DPSNCGYYMLLSHIYADSGRWKDVERVRMTMKNRGLVKP 524
>gi|357465899|ref|XP_003603234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492282|gb|AES73485.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 973
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 220/633 (34%), Positives = 352/633 (55%), Gaps = 49/633 (7%)
Query: 16 YVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF------DMMPEK--- 66
YV+ G + A +F QM E +++SW ++ G R + + RLF ++P++
Sbjct: 342 YVKAGSVNYARRMFGQMKEVDLISWNTVISGCARSGLEECSLRLFIDLLRSGLLPDQFTI 401
Query: 67 -------------------------------DVVAQTNMVLGYCQDGRVDEGREIFDEMP 95
D T ++ Y + G+++E +F
Sbjct: 402 TSVLRACSSLEESYCVGRQVHTCALKAGIVLDSFVSTALIDVYSKGGKMEEAELLFHNQD 461
Query: 96 KKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCG----RIQDAWE 151
++ SW M+ G+ ++ A +LF +M E+ E + + R+Q +
Sbjct: 462 GFDLASWNAMMHGFTVSDNYREALRLFSLMHERGEKADQITFANAAKAAGCLVRLQQGKQ 521
Query: 152 LFKAMPMKSVVASNSMILGLG----QNGEVQKARVVFDQMREKDDATWSGMIKVYERKGY 207
+ + +I G+ + GE++ AR VF+Q+ DD W+ +I G
Sbjct: 522 IHAVVIKMRFHYDLFVISGILDMYLKCGEMKSARKVFNQIPSPDDVAWTTVISGCVENGE 581
Query: 208 ELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASV 267
E + + + M+ GV+ + + +++ C+ L +L+ G+Q+HA +++ D +V +
Sbjct: 582 EEQALFTYHQMRLAGVQPDEYTFATLVKACSLLTALEQGKQIHANIMKLNCAFDPFVMTS 641
Query: 268 LITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPD 327
L+ MY KCG + +F ++ + +WN++I G AQ+G E++L F+EM S GV PD
Sbjct: 642 LVDMYAKCGNIEDAYGLFRRMNTRSVALWNAMIVGLAQHGNAEEALNFFNEMKSRGVTPD 701
Query: 328 DVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLI 387
VT +GVLSACS++G + + F+SM+ Y VEP+ EHY+C+VD L RAG +++A K++
Sbjct: 702 RVTFIGVLSACSHSGLTSDAYKNFDSMQKTYGVEPEIEHYSCLVDALSRAGHIQEAEKVV 761
Query: 388 EAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFH 447
+MPFE A ++ +LL ACR + E A+KL ++P ++ Y+LLSNIYA+ ++
Sbjct: 762 SSMPFEASATMYRTLLNACRVQGDKETGERVAEKLFTMDPSDSAAYVLLSNIYAAANQWE 821
Query: 448 DVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREA 507
+ R M++ NV K PG SWI+++ KVH+F D SH E +I +E + ++E
Sbjct: 822 NAVSARNMMKRVNVKKEPGFSWIDMKNKVHLFVAGD-RSHEETDLIYNKVEYVMKRIKEE 880
Query: 508 GYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAI 567
GY PD+ F L D++EE+K +L YHSEKLA+AYGL+K P +RV+KNLRVCGDCH+AI
Sbjct: 881 GYVPDTEFALVDIEEEDKESALSYHSEKLAIAYGLMKTPPSTTLRVIKNLRVCGDCHNAI 940
Query: 568 KLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
K IS V REI+LRDANRFHHF+ G+CSC DYW
Sbjct: 941 KYISNVFQREIVLRDANRFHHFRSGICSCGDYW 973
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 116/501 (23%), Positives = 204/501 (40%), Gaps = 95/501 (18%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEK----NVVSWTVMLGGFIRDSRIDD- 55
MP R+VV W M++ YVE G E LF + VS +L G + + +
Sbjct: 183 MPVRDVVLWNVMMKAYVEMGAGDEVLGLFSAFHRSGLRPDCVSVRTILMGVGKKTVFERE 242
Query: 56 -------ARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNV--------- 99
A +LF + DV + Y Q G E + F +M K V
Sbjct: 243 LEQVRAYATKLFVCDDDSDVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIV 302
Query: 100 -----------------------ISW-------TTMISGYVNNNRIDVARKLFEVMPEKN 129
W + I+ YV ++ AR++F M E +
Sbjct: 303 ILSVVASLNHLELGKQIHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVD 362
Query: 130 EVSWTAMLMGYTQCGRIQDAWELF------------------------------------ 153
+SW ++ G + G + + LF
Sbjct: 363 LISWNTVISGCARSGLEECSLRLFIDLLRSGLLPDQFTITSVLRACSSLEESYCVGRQVH 422
Query: 154 ----KAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYEL 209
KA + S ++I + G++++A ++F D A+W+ M+ +
Sbjct: 423 TCALKAGIVLDSFVSTALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNYR 482
Query: 210 EVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLI 269
E + LF+LM + G + + + + L L G+Q+HA +++ +F D++V S ++
Sbjct: 483 EALRLFSLMHERGEKADQITFANAAKAAGCLVRLQQGKQIHAVVIKMRFHYDLFVISGIL 542
Query: 270 TMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDV 329
MY+KCGE+ + +F+ S D V W ++ISG + G E++L +H+M +GV PD+
Sbjct: 543 DMYLKCGEMKSARKVFNQIPSPDDVAWTTVISGCVENGEEEQALFTYHQMRLAGVQPDEY 602
Query: 330 TLVGVLSACSYTGKVKEGREIFES-MKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIE 388
T ++ ACS +++G++I + MK +P +VD+ + G +EDA L
Sbjct: 603 TFATLVKACSLLTALEQGKQIHANIMKLNCAFDPFV--MTSLVDMYAKCGNIEDAYGLFR 660
Query: 389 AMPFEPDAIIWGSLLGACRTH 409
M A +W +++ H
Sbjct: 661 RMNTRSVA-LWNAMIVGLAQH 680
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 106/415 (25%), Positives = 195/415 (46%), Gaps = 40/415 (9%)
Query: 2 PERNVVSWTAMVRGYVEEGMITEAGTLFWQMPE--KNVVSWTVMLGGFIRDSRIDDARRL 59
P+R V + ++ Y + G + A LF P+ +++V++ +L + + D +
Sbjct: 46 PDRYVTN--NLITMYAKCGSLFSARKLFDITPQSDRDLVTYNAILAAYAHTGELHDVEKT 103
Query: 60 FDMMPEKDVVAQTNMV---------LGYCQDGRVDEGREIFDEMPKKNVISWTTMISG-- 108
+ ++ Q+ M+ C E K + W ++G
Sbjct: 104 HEAFHIFRLLRQSVMLTTRHTLSPLFKLCLLYGSPSASEALQGYAVKIGLQWDVFVAGAL 163
Query: 109 ---YVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSV---- 161
Y RI AR LF+ MP ++ V W M+ Y + G + LF A +
Sbjct: 164 VNIYAKFQRIREARVLFDRMPVRDVVLWNVMMKAYVEMGAGDEVLGLFSAFHRSGLRPDC 223
Query: 162 VASNSMILGLGQNG----EVQKARVVFDQMREKDD----ATWSGMIKVYERKGYELEVID 213
V+ ++++G+G+ E+++ R ++ DD W+ + Y + G E +D
Sbjct: 224 VSVRTILMGVGKKTVFERELEQVRAYATKLFVCDDDSDVTVWNKTLSSYLQAGEGWEAVD 283
Query: 214 LFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYI 273
F M K V + + I +LSV ASL L+ G+Q+H +VR +D V VA+ I MY+
Sbjct: 284 CFRDMIKSRVPCDSLTYIVILSVVASLNHLELGKQIHGAVVRFGWDQFVSVANSAINMYV 343
Query: 274 KCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVG 333
K G + + +F D++ WN++ISG A+ GL E SL++F ++ SG++PD T+
Sbjct: 344 KAGSVNYARRMFGQMKEVDLISWNTVISGCARSGLEECSLRLFIDLLRSGLLPDQFTITS 403
Query: 334 VLSACSYTGKVKE----GREIFE-SMKSKYLVEPKTEHYACMVDLLGRAGQVEDA 383
VL ACS ++E GR++ ++K+ +++ ++D+ + G++E+A
Sbjct: 404 VLRACS---SLEESYCVGRQVHTCALKAGIVLDSFVS--TALIDVYSKGGKMEEA 453
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 84/187 (44%), Gaps = 10/187 (5%)
Query: 227 FPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFD 286
P S+L + + L G++ HA +V + D YV + LITMY KCG L + +FD
Sbjct: 13 LPQWFSILRHAIADSDLILGKRTHAVIVTSGLNPDRYVTNNLITMYAKCGSLFSARKLFD 72
Query: 287 NF--ASKDIVMWNSIISGYAQYG------LGEKSLKVFHEMFSSGVMPDDVTLVGVLSAC 338
+ +D+V +N+I++ YA G ++ +F + S ++ TL + C
Sbjct: 73 ITPQSDRDLVTYNAILAAYAHTGELHDVEKTHEAFHIFRLLRQSVMLTTRHTLSPLFKLC 132
Query: 339 SYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAII 398
G E + K ++ +V++ + ++ +A L + MP D ++
Sbjct: 133 LLYGS-PSASEALQGYAVKIGLQWDVFVAGALVNIYAKFQRIREARVLFDRMPVR-DVVL 190
Query: 399 WGSLLGA 405
W ++ A
Sbjct: 191 WNVMMKA 197
>gi|359484317|ref|XP_003633097.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
[Vitis vinifera]
Length = 1005
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 222/618 (35%), Positives = 353/618 (57%), Gaps = 29/618 (4%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMP 64
+VVSW+A++ ++G EA +F +M V+ F S + A L D+
Sbjct: 395 DVVSWSAIITCLDQKGQSREAAEVFKRMRHSGVIP-----NQFTLASLVSAATDLGDLYY 449
Query: 65 -------------EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVN 111
E D +V Y + G V +G +F+ +++ISW ++SG+ +
Sbjct: 450 GESIHACVCKYGFEYDNTVCNALVTMYMKIGSVQDGCRVFEATTNRDLISWNALLSGFHD 509
Query: 112 NNRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASN-- 165
N D ++F M + N ++ ++L + + D + A +K+ + N
Sbjct: 510 NETCDTGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDV-DLGKQVHAQIVKNSLDGNDF 568
Query: 166 ---SMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEG 222
+++ +N ++ A +F+++ ++D W+ ++ Y + G + + F MQ+EG
Sbjct: 569 VGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREG 628
Query: 223 VRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGK 282
V+ N +L S LS C+ +A+LD GRQ+H+ ++ D++VAS L+ MY KCG + +
Sbjct: 629 VKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAE 688
Query: 283 LIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTG 342
++FD S+D V WN+II GY+Q+G G K+LK F M G +PD+VT +GVLSACS+ G
Sbjct: 689 VVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGTVPDEVTFIGVLSACSHMG 748
Query: 343 KVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSL 402
++EG++ F S+ Y + P EHYACMVD+LGRAG+ + IE M + +IW ++
Sbjct: 749 LIEEGKKHFNSLSKIYGITPTIEHYACMVDILGRAGKFHEVESFIEEMKLTSNVLIWETV 808
Query: 403 LGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVI 462
LGAC+ H ++ E AA KL +LEP+ YILLSN++A++G + DV +R M R V
Sbjct: 809 LGACKMHGNIEFGERAAMKLFELEPEIDSNYILLSNMFAAKGMWDDVTNVRALMSTRGVK 868
Query: 463 KPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDE 522
K PGCSW+EV +VH+F D SHP+ I L+ + L GY P++ VLH+V +
Sbjct: 869 KEPGCSWVEVNGQVHVFLSHD-GSHPKIREIHLKLQDLHQKLMSVGYTPNTDHVLHNVSD 927
Query: 523 EEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRD 582
EK L YHSE+LA+A+ L+ IR+ KNLR+CGDCH +K IS++ +E+++RD
Sbjct: 928 REKQELLFYHSERLALAFALLSTSTRKTIRIFKNLRICGDCHDFMKSISEITNQELVVRD 987
Query: 583 ANRFHHFKDGLCSCRDYW 600
N FHHFK+G CSC+++W
Sbjct: 988 INCFHHFKNGSCSCQNFW 1005
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 109/473 (23%), Positives = 212/473 (44%), Gaps = 56/473 (11%)
Query: 9 WTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDV 68
W ++V Y + G A +F ++PE++VVSWT ++ GF+ + A LF M + V
Sbjct: 166 WNSLVNVYAKCGSANYACKVFGEIPERDVVSWTALITGFVAEGYGSGAVNLFCEMRREGV 225
Query: 69 ------VAQTNMVLGYCQDGRVDEGREIFDEMPK----KNVISWTTMISGYVNNNRIDVA 118
A C D ++ G+++ E K ++ + ++ Y + +A
Sbjct: 226 EANEFTYATALKACSMCLD--LEFGKQVHAEAIKVGDFSDLFVGSALVDLYAKCGEMVLA 283
Query: 119 RKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVAS----NSMILGLGQN 174
++F MP++N VSW A+L G+ Q G + LF M + S ++++ G +
Sbjct: 284 ERVFLCMPKQNAVSWNALLNGFAQMGDAEKVLNLFCRMTGSEINFSKFTLSTVLKGCANS 343
Query: 175 GEVQKARVV-----------------------------------FDQMREKDDATWSGMI 199
G ++ ++V F ++ + D +WS +I
Sbjct: 344 GNLRAGQIVHSLAIRIGCELDEFISCCLVDMYSKCGLAGDALKVFVRIEDPDVVSWSAII 403
Query: 200 KVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFD 259
++KG E ++F M+ GV N +L S++S L L +G +HA + + F+
Sbjct: 404 TCLDQKGQSREAAEVFKRMRHSGVIPNQFTLASLVSAATDLGDLYYGESIHACVCKYGFE 463
Query: 260 VDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEM 319
D V + L+TMY+K G + G +F+ ++D++ WN+++SG+ + L++F++M
Sbjct: 464 YDNTVCNALVTMYMKIGSVQDGCRVFEATTNRDLISWNALLSGFHDNETCDTGLRIFNQM 523
Query: 320 FSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQ 379
+ G P+ T + +L +CS V G+++ + L A +VD+ +
Sbjct: 524 LAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTA-LVDMYAKNRF 582
Query: 380 VEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGP 432
+EDA + + + D W ++ + + E A K +Q++ + P
Sbjct: 583 LEDAETIFNRL-IKRDLFAWTVIVAG---YAQDGQGEKAVKCFIQMQREGVKP 631
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 107/214 (50%), Gaps = 17/214 (7%)
Query: 233 VLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKD 292
+L CAS L+ G+ +H Q+++ + D ++ + L+ +Y KCG +F +D
Sbjct: 134 MLRTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPERD 193
Query: 293 IVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIF- 351
+V W ++I+G+ G G ++ +F EM GV ++ T L ACS ++ G+++
Sbjct: 194 VVSWTALITGFVAEGYGSGAVNLFCEMRREGVEANEFTYATALKACSMCLDLEFGKQVHA 253
Query: 352 ESMKSKYLVEPKTEHY--ACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTH 409
E++K V ++ + + +VDL + G++ A ++ MP + +A+ W +LL
Sbjct: 254 EAIK----VGDFSDLFVGSALVDLYAKCGEMVLAERVFLCMP-KQNAVSWNALLNG---- 304
Query: 410 MKLDLAEVA-AKKLLQLEPKNAGPYILLSNIYAS 442
A++ A+K+L L + G I S S
Sbjct: 305 ----FAQMGDAEKVLNLFCRMTGSEINFSKFTLS 334
>gi|222631044|gb|EEE63176.1| hypothetical protein OsJ_17985 [Oryza sativa Japonica Group]
Length = 745
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 225/589 (38%), Positives = 347/589 (58%), Gaps = 31/589 (5%)
Query: 41 TVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNV- 99
++ + + +++A ++F+MM KDVV+ MV GY Q G E+F M K+N+
Sbjct: 159 NALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIP 218
Query: 100 ---ISWTTMISGY----VNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWEL 152
++WT +I+GY ++ ++V R++ N V+ ++L G E+
Sbjct: 219 LDMVTWTAVIAGYSQRGCSHEALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEI 278
Query: 153 FKAMPMKSVVAS---------------NSMILGLGQNGEVQKARVVFDQ--MREKDDATW 195
A +K+ + + N++I + + AR +FD + E++ TW
Sbjct: 279 -HAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTW 337
Query: 196 SGMIKVYERKGYELEVIDLFTLMQKE--GVRVNFPSLISVLSVCASLASLDHGRQVHAQL 253
+ MI + + G + + LF M E GV N ++ +L CA LA++ G+Q+HA +
Sbjct: 338 TVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYV 397
Query: 254 VRC-QFDVDVY-VASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEK 311
+R Q+D Y VA+ LI MY KCG++ + +FD+ + K + W S+++GY +G G +
Sbjct: 398 LRHHQYDSSAYFVANCLINMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSE 457
Query: 312 SLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMV 371
+L +F +M +G +PDD+T + VL ACS+ G V +G F+SM + Y + P+ EHYA +
Sbjct: 458 ALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYAYAI 517
Query: 372 DLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAG 431
DLL R G+++ A K ++ MP EP A++W +LL ACR H ++LAE A KL+++ +N G
Sbjct: 518 DLLARFGRLDKAWKTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAENDG 577
Query: 432 PYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHP 491
Y L+SNIYA+ GR+ DVA +R M+K + K PGCSW++ +K F D SHP P
Sbjct: 578 SYTLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCSWVQGQKGTASFFVGD-RSHPLSP 636
Query: 492 MIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPI 551
I +LE + ++ GY P+++F LHDVDEEEK + L HSEKLA+AYGL+ G PI
Sbjct: 637 QIYALLESLIDRIKAMGYVPETNFALHDVDEEEKNNLLVEHSEKLALAYGLLTTFPGCPI 696
Query: 552 RVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
R+ KNLRVCGDCHSA ISK++ EI++RD +RFHHFK+G CSC YW
Sbjct: 697 RITKNLRVCGDCHSAFTYISKIVDHEIVVRDPSRFHHFKNGSCSCGGYW 745
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 114/412 (27%), Positives = 192/412 (46%), Gaps = 68/412 (16%)
Query: 65 EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKK---NVISWTTMISGYVNNNRIDVARKL 121
E +V +V Y + G ++E IFDE+ ++ +VISW +++S +V ++ A L
Sbjct: 42 ESNVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDL 101
Query: 122 FEVM-------------------------------PEKNEVSWTAMLMG----------- 139
F M P+ EV A+ G
Sbjct: 102 FSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNAL 161
Query: 140 ---YTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREK----DD 192
Y +CG +++A ++F M K VV+ N+M+ G Q+G + A +F MR++ D
Sbjct: 162 IDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDM 221
Query: 193 ATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHA- 251
TW+ +I Y ++G E +++F M G N ++ISVLS CASL + G ++HA
Sbjct: 222 VTWTAVIAGYSQRGCSHEALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAY 281
Query: 252 QLVRCQF---------DVDVYVASVLITMYIKCGELVKGKLIFDN--FASKDIVMWNSII 300
L C D D+ V + LI MY KC + IFD+ +++V W +I
Sbjct: 282 SLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMI 341
Query: 301 SGYAQYGLGEKSLKVFHEMFSS--GVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKY 358
G+AQYG +LK+F EM S GV P+ T+ +L AC++ ++ G++I + +
Sbjct: 342 GGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHH 401
Query: 359 LVEPKTEHYA-CMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTH 409
+ A C++++ + G V+ A + ++M + AI W S++ H
Sbjct: 402 QYDSSAYFVANCLINMYSKCGDVDTARHVFDSMS-QKSAISWTSMMTGYGMH 452
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 124/313 (39%), Gaps = 67/313 (21%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV----VSWTVMLGGFIRDSRIDDA 56
M ++VVSW AMV GY + G A LF M ++N+ V+WT ++ G+ + +A
Sbjct: 181 MEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEA 240
Query: 57 RRLFDMMPEKDVVAQTNM---VLGYCQD-GRVDEGREIFDEMPKKNVIS----------- 101
+F M + VL C G +G EI K +++
Sbjct: 241 LNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDED 300
Query: 102 ---WTTMISGYVNNNRIDVARKLFEVMP--EKNEVSWTAMLMGYTQCGRIQDAWELFKAM 156
+ +I Y AR +F+ +P E+N V+WT M+ G+ Q G DA +LF M
Sbjct: 301 LMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEM 360
Query: 157 --------PMKSVVA-----------------------------------SNSMILGLGQ 173
P ++ +N +I +
Sbjct: 361 ISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSK 420
Query: 174 NGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISV 233
G+V AR VFD M +K +W+ M+ Y G E +D+F M+K G + + + V
Sbjct: 421 CGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVV 480
Query: 234 LSVCASLASLDHG 246
L C+ +D G
Sbjct: 481 LYACSHCGMVDQG 493
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 110/254 (43%), Gaps = 47/254 (18%)
Query: 218 MQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGE 277
M + G R++ +L VL C L S G H + F+ +V++ + L+ MY +CG
Sbjct: 1 MLRAGTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGS 60
Query: 278 LVKGKLIFDNFASK---DIVMWNSIISGYAQYGLGEKSLKVFHEMF------SSGVMPDD 328
L + +IFD + D++ WNSI+S + + +L +F +M + D
Sbjct: 61 LEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDI 120
Query: 329 VTLVGVLSACSYTGKVKEGREIF-ESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLI 387
+++V +L AC V + +E+ ++++ ++ + ++D + G +E+A+K+
Sbjct: 121 ISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGN--ALIDAYAKCGLMENAVKVF 178
Query: 388 EAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFH 447
M F+ D + W +++ Y+ G F
Sbjct: 179 NMMEFK-DVVSWNAMVAG----------------------------------YSQSGNFK 203
Query: 448 DVAELRKNMRKRNV 461
EL KNMRK N+
Sbjct: 204 AAFELFKNMRKENI 217
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 95/221 (42%), Gaps = 34/221 (15%)
Query: 12 MVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQ 71
++ Y + G + A +F M +K+ +SWT M+ G+ R +A +FD M + V
Sbjct: 414 LINMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPD 473
Query: 72 --TNMVLGY-CQD-GRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPE 127
T +V+ Y C G VD+G FD M + + P
Sbjct: 474 DITFLVVLYACSHCGMVDQGLSYFDSMSAD------------------------YGLTPR 509
Query: 128 KNEVSWTAMLMGYTQCGRIQDAWELFKAMPMK-SVVASNSMILGLGQNGEVQKARVVFD- 185
++ L+ + GR+ AW+ K MPM+ + V +++ + V+ A +
Sbjct: 510 AEHYAYAIDLLA--RFGRLDKAWKTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNK 567
Query: 186 --QMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVR 224
+M ++D +++ + +Y G +V + LM+K G++
Sbjct: 568 LVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIK 608
Score = 45.4 bits (106), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 73/162 (45%), Gaps = 15/162 (9%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVV----SWTVMLGGFIRDSRIDDA 56
M +++ +SWT+M+ GY G +EA +F +M + V ++ V+L +D
Sbjct: 434 MSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQG 493
Query: 57 RRLFDMMPEKDVVAQTNMVLGYCQD-----GRVDEGREIFDEMP-KKNVISWTTMISGYV 110
FD M + Y D GR+D+ + +MP + + W ++S
Sbjct: 494 LSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKDMPMEPTAVVWVALLSACR 553
Query: 111 NNNRIDVA----RKLFEVMPEKNEVSWTAMLMGYTQCGRIQD 148
++ +++A KL E M +N+ S+T + Y GR +D
Sbjct: 554 VHSNVELAEHALNKLVE-MNAENDGSYTLISNIYATAGRWKD 594
>gi|115486938|ref|NP_001065956.1| Os12g0109300 [Oryza sativa Japonica Group]
gi|113648463|dbj|BAF28975.1| Os12g0109300 [Oryza sativa Japonica Group]
gi|125578262|gb|EAZ19408.1| hypothetical protein OsJ_34963 [Oryza sativa Japonica Group]
Length = 645
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 219/542 (40%), Positives = 331/542 (61%), Gaps = 19/542 (3%)
Query: 72 TNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVN----NNRIDVARKLFE--VM 125
T+++ Y + G + + +FDEMP + +SWT +I+ Y++ + VAR F +
Sbjct: 110 TSLLTLYARCGLLHRAQRVFDEMPHPSTVSWTALITAYMDAGDLREAVHVARNAFANGMR 169
Query: 126 PEKNEVSWTAMLMGYTQCGRIQD------AWELFKAMPM-KSVVASNSMILGLGQNGEVQ 178
P+ S+TA+ + T C R+ D W + + +SV + + + + GE+
Sbjct: 170 PD----SFTAVRV-LTACARVADLATGETVWRAAEQEGIAQSVFVATAAVDLYVKCGEMA 224
Query: 179 KARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCA 238
KAR VFD+MR+KD W M+ Y G+ E +DLF MQ EGVR + ++ LS C
Sbjct: 225 KAREVFDKMRDKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGVRPDCYAVAGALSACT 284
Query: 239 SLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNS 298
L +LD GRQ + +F + + + LI MY KCG + ++F KDI++WN+
Sbjct: 285 RLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTAEAWVVFQQMRKKDIIVWNA 344
Query: 299 IISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKY 358
+I G G + + + +M SGV +D T +G+L +C++TG +++GR F +M Y
Sbjct: 345 MILGLGMTGHEKTAFTLIGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLY 404
Query: 359 LVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVA 418
+ P+ EHY C+VDLL RAG +++A +LI+ MP +A+I G+LLG C+ H +LAE
Sbjct: 405 HISPRIEHYGCIVDLLSRAGLLQEAHQLIDDMPMPANAVILGALLGGCKIHRNAELAEHV 464
Query: 419 AKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHM 478
+L++LEP N+G Y++LSNIY+++GR+ D A+LR +M+++ V K P CSW+E E KVH
Sbjct: 465 LTQLIRLEPWNSGNYVMLSNIYSNRGRWEDAAKLRLDMKEKGVEKVPACSWVEFEGKVHE 524
Query: 479 FTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAV 538
F D SHP I + L+++G ++ GY P + V+ DV++EEK H+L +HSEKLA+
Sbjct: 525 FRVGD-KSHPLSDQIYKKLDELGLEMKTMGYEPTTEVVMFDVEDEEKEHTLVHHSEKLAI 583
Query: 539 AYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRD 598
A+ L+ G IRV KNLRVC DCH+AIKLIS++ REII+RD NRFH F+DG CSC D
Sbjct: 584 AFNLLVTGPGETIRVTKNLRVCSDCHTAIKLISRITHREIIVRDNNRFHCFRDGSCSCND 643
Query: 599 YW 600
YW
Sbjct: 644 YW 645
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 94/441 (21%), Positives = 166/441 (37%), Gaps = 129/441 (29%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MP + VSWTA++ Y++ G + EA + +N + + F + R+
Sbjct: 132 MPHPSTVSWTALITAYMDAGDLREAVHV-----ARNAFANGMRPDSFTAVRVLTACARVA 186
Query: 61 DMM--------PEKDVVAQTNMVLG-----YCQDGRVDEGREIFDEMPKKNVISWTTMIS 107
D+ E++ +AQ+ V Y + G + + RE+FD+M K+ ++W M+
Sbjct: 187 DLATGETVWRAAEQEGIAQSVFVATAAVDLYVKCGEMAKAREVFDKMRDKDAVAWGAMVG 246
Query: 108 GYVNNNRIDVARKLFEVMPEK--------------------------------------- 128
GY +N A LF M +
Sbjct: 247 GYASNGHPREALDLFLAMQAEGVRPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLD 306
Query: 129 NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMR 188
N V TA++ Y +CG +AW +F+ M K ++ N+MILGLG G + A + Q
Sbjct: 307 NPVLGTALIDMYAKCGSTAEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKTAFTLIGQ-- 364
Query: 189 EKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQ 248
M+K GV++N + I +L C + GR+
Sbjct: 365 -----------------------------MEKSGVKLNDNTFIGLLCSCTHTGLIQDGRR 395
Query: 249 VHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGL 308
+ + +Y S I Y I+ ++ GL
Sbjct: 396 YFHNMTK------LYHISPRIEHY------------------------GCIVDLLSRAGL 425
Query: 309 GEKSLKVFHEMFSSGVMPDDVTLVG-VLSACSYTGKVKEGREIFESMKSKYL-VEP-KTE 365
L+ H++ MP + ++G +L C K+ E+ E + ++ + +EP +
Sbjct: 426 ----LQEAHQLIDDMPMPANAVILGALLGGC----KIHRNAELAEHVLTQLIRLEPWNSG 477
Query: 366 HYACMVDLLGRAGQVEDAMKL 386
+Y + ++ G+ EDA KL
Sbjct: 478 NYVMLSNIYSNRGRWEDAAKL 498
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 93/182 (51%), Gaps = 6/182 (3%)
Query: 228 PSLISVLSVCASLASLDH----GRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKL 283
PS ++ S + L H G Q+HA+ ++ + +V + L+T+Y +CG L + +
Sbjct: 68 PSHLTFPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLTLYARCGLLHRAQR 127
Query: 284 IFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGK 343
+FD V W ++I+ Y G +++ V F++G+ PD T V VL+AC+
Sbjct: 128 VFDEMPHPSTVSWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARVAD 187
Query: 344 VKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
+ G ++ + + + + + A VDL + G++ A ++ + M + DA+ WG+++
Sbjct: 188 LATGETVWRAAEQEGIAQSVFVATAA-VDLYVKCGEMAKAREVFDKMR-DKDAVAWGAMV 245
Query: 404 GA 405
G
Sbjct: 246 GG 247
>gi|356574473|ref|XP_003555371.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Glycine max]
Length = 923
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 222/638 (34%), Positives = 354/638 (55%), Gaps = 48/638 (7%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEK--- 66
A++ Y + G + +A +F M ++ VSW +L G +++ DA F M
Sbjct: 287 NALIAMYAKCGRMEDAERVFASMLCRDYVSWNTLLSGLVQNELYRDALNYFRDMQNSAQK 346
Query: 67 -DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVIS----WTTMISGYVNNNRIDVARKL 121
D V+ N++ + G + G+E+ + + S T+I Y +
Sbjct: 347 PDQVSVLNLIAASGRSGNLLNGKEVHAYAIRNGLDSNMQIGNTLIDMYAKCCCVKHMGYA 406
Query: 122 FEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKS--------------------- 160
FE M EK+ +SWT ++ GY Q +A LF+ + +K
Sbjct: 407 FECMHEKDLISWTTIIAGYAQNECHLEAINLFRKVQVKGMDVDPMMIGSVLRACSGLKSR 466
Query: 161 -----------------VVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYE 203
++ N+++ G+ G AR F+ +R KD +W+ MI
Sbjct: 467 NFIREIHGYVFKRDLADIMLQNAIVNVYGEVGHRDYARRAFESIRSKDIVSWTSMITCCV 526
Query: 204 RKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVY 263
G +E ++LF +++ ++ + ++IS LS A+L+SL G+++H L+R F ++
Sbjct: 527 HNGLPVEALELFYSLKQTNIQPDSIAIISALSATANLSSLKKGKEIHGFLIRKGFFLEGP 586
Query: 264 VASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSG 323
+AS L+ MY CG + + +F + +D+++W S+I+ +G G +++ +F +M
Sbjct: 587 IASSLVDMYACCGTVENSRKMFHSVKQRDLILWTSMINANGMHGCGNEAIALFKKMTDEN 646
Query: 324 VMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDA 383
V+PD +T + +L ACS++G + EG+ FE MK Y +EP EHYACMVDLL R+ +E+A
Sbjct: 647 VIPDHITFLALLYACSHSGLMVEGKRFFEIMKYGYQLEPWPEHYACMVDLLSRSNSLEEA 706
Query: 384 MKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQ 443
+ + +MP +P + +W +LLGAC H +L E+AAK+LLQ + KN+G Y L+SNI+A+
Sbjct: 707 YQFVRSMPIKPSSEVWCALLGACHIHSNKELGELAAKELLQSDTKNSGKYALISNIFAAD 766
Query: 444 GRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGL 503
GR++DV E+R M+ + K PGCSWIEV+ K+H F RD SHP+ I L + L
Sbjct: 767 GRWNDVEEVRLRMKGNGLKKNPGCSWIEVDNKIHTFMARD-KSHPQTDDIYLKLAQFTKL 825
Query: 504 L-REAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGD 562
L ++ GY + FV H+V EEEK L HSE+LA+ YGL+ P+G IR+ KNLR+C D
Sbjct: 826 LGKKGGYIAQTKFVFHNVSEEEKTQMLYRHSERLALGYGLLVTPKGTSIRITKNLRICDD 885
Query: 563 CHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
CH+ K+ S+V R +++RDANRFHHF+ GLCSC D+W
Sbjct: 886 CHTFFKIASEVSQRALVVRDANRFHHFERGLCSCGDFW 923
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 106/428 (24%), Positives = 209/428 (48%), Gaps = 25/428 (5%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPE----KNVVSWTVMLGGFIRDSRIDDA 56
M + + VSW +++ +V EG EA +LF +M E N ++ L G S +
Sbjct: 208 MEKEDTVSWNSIISAHVTEGKCLEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLG 267
Query: 57 RRLFDMMPEK----DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+ + DV ++ Y + GR+++ +F M ++ +SW T++SG V N
Sbjct: 268 MGIHGAALKSNHFADVYVANALIAMYAKCGRMEDAERVFASMLCRDYVSWNTLLSGLVQN 327
Query: 113 ----NRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVAS---- 164
+ ++ R + + ++VS ++ + G + + E+ A +++ + S
Sbjct: 328 ELYRDALNYFRDMQNSAQKPDQVSVLNLIAASGRSGNLLNGKEV-HAYAIRNGLDSNMQI 386
Query: 165 -NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGV 223
N++I + V+ F+ M EKD +W+ +I Y + LE I+LF +Q +G+
Sbjct: 387 GNTLIDMYAKCCCVKHMGYAFECMHEKDLISWTTIIAGYAQNECHLEAINLFRKVQVKGM 446
Query: 224 RVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKL 283
V+ + SVL C+ L S + R++H + + D+ + + ++ +Y + G +
Sbjct: 447 DVDPMMIGSVLRACSGLKSRNFIREIHGYVFKRDL-ADIMLQNAIVNVYGEVGHRDYARR 505
Query: 284 IFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGK 343
F++ SKDIV W S+I+ GL ++L++F+ + + + PD + ++ LSA +
Sbjct: 506 AFESIRSKDIVSWTSMITCCVHNGLPVEALELFYSLKQTNIQPDSIAIISALSATANLSS 565
Query: 344 VKEGREI--FESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGS 401
+K+G+EI F K +L P + +VD+ G VE++ K+ ++ + D I+W S
Sbjct: 566 LKKGKEIHGFLIRKGFFLEGPIA---SSLVDMYACCGTVENSRKMFHSVK-QRDLILWTS 621
Query: 402 LLGACRTH 409
++ A H
Sbjct: 622 MINANGMH 629
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 94/402 (23%), Positives = 192/402 (47%), Gaps = 24/402 (5%)
Query: 72 TNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMP----E 127
T ++ Y + G + + ++FDEM ++ + +W M+ +V++ + A +L++ M
Sbjct: 83 TKLLHMYEKCGSLKDAVKVFDEMTERTIFTWNAMMGAFVSSGKYLEAIELYKEMRVLGVA 142
Query: 128 KNEVSWTAMLMGYTQCGRIQDAWEL----FKAMPMKSVVASNSMILGLGQNGEVQKARVV 183
+ ++ ++L G + E+ K + V N++I G+ G++ ARV+
Sbjct: 143 IDACTFPSVLKACGALGESRLGAEIHGVAVKCGFGEFVFVCNALIAMYGKCGDLGGARVL 202
Query: 184 FD--QMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLA 241
FD M ++D +W+ +I + +G LE + LF MQ+ GV N + ++ L +
Sbjct: 203 FDGIMMEKEDTVSWNSIISAHVTEGKCLEALSLFRRMQEVGVASNTYTFVAALQGVEDPS 262
Query: 242 SLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIIS 301
+ G +H ++ DVYVA+ LI MY KCG + + +F + +D V WN+++S
Sbjct: 263 FVKLGMGIHGAALKSNHFADVYVANALIAMYAKCGRMEDAERVFASMLCRDYVSWNTLLS 322
Query: 302 GYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVE 361
G Q L +L F +M +S PD V+++ +++A +G + G+E+ + + ++
Sbjct: 323 GLVQNELYRDALNYFRDMQNSAQKPDQVSVLNLIAASGRSGNLLNGKEV-HAYAIRNGLD 381
Query: 362 PKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKK 421
+ ++D+ + V+ E M E D I W +++ A + L + +
Sbjct: 382 SNMQIGNTLIDMYAKCCCVKHMGYAFECM-HEKDLISWTTII-AGYAQNECHLEAINLFR 439
Query: 422 LLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIK 463
+Q++ + P ++ S + A G ++ RN I+
Sbjct: 440 KVQVKGMDVDPMMIGSVLRACSG-----------LKSRNFIR 470
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 96/446 (21%), Positives = 194/446 (43%), Gaps = 52/446 (11%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMM------ 63
T ++ Y + G + +A +F +M E+ + +W M+G F+ + +A L+ M
Sbjct: 83 TKLLHMYEKCGSLKDAVKVFDEMTERTIFTWNAMMGAFVSSGKYLEAIELYKEMRVLGVA 142
Query: 64 ----------------PEKDVVAQTN-----------------MVLGYCQDGRVDEGREI 90
E + A+ + ++ Y + G + R +
Sbjct: 143 IDACTFPSVLKACGALGESRLGAEIHGVAVKCGFGEFVFVCNALIAMYGKCGDLGGARVL 202
Query: 91 FDE--MPKKNVISWTTMISGYVNNNRIDVARKLFEVMPE----KNEVSWTAMLMGYTQCG 144
FD M K++ +SW ++IS +V + A LF M E N ++ A L G
Sbjct: 203 FDGIMMEKEDTVSWNSIISAHVTEGKCLEALSLFRRMQEVGVASNTYTFVAALQGVEDPS 262
Query: 145 RIQDAWEL----FKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIK 200
++ + K+ V +N++I + G ++ A VF M +D +W+ ++
Sbjct: 263 FVKLGMGIHGAALKSNHFADVYVANALIAMYAKCGRMEDAERVFASMLCRDYVSWNTLLS 322
Query: 201 VYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDV 260
+ + ++ F MQ + + S++++++ +L +G++VHA +R D
Sbjct: 323 GLVQNELYRDALNYFRDMQNSAQKPDQVSVLNLIAASGRSGNLLNGKEVHAYAIRNGLDS 382
Query: 261 DVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMF 320
++ + + LI MY KC + F+ KD++ W +II+GYAQ +++ +F ++
Sbjct: 383 NMQIGNTLIDMYAKCCCVKHMGYAFECMHEKDLISWTTIIAGYAQNECHLEAINLFRKVQ 442
Query: 321 SSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQV 380
G+ D + + VL ACS REI + + L + ++ +V++ G G
Sbjct: 443 VKGMDVDPMMIGSVLRACSGLKSRNFIREIHGYVFKRDLADIMLQN--AIVNVYGEVGHR 500
Query: 381 EDAMKLIEAMPFEPDAIIWGSLLGAC 406
+ A + E++ D + W S++ C
Sbjct: 501 DYARRAFESIR-SKDIVSWTSMITCC 525
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 87/176 (49%), Gaps = 8/176 (4%)
Query: 233 VLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKD 292
+L +C ++ +L G+Q+HA+L++ + ++A+ L+ MY KCG L +FD +
Sbjct: 52 LLDLCVAVKALPQGQQLHARLLKSH--LSAFLATKLLHMYEKCGSLKDAVKVFDEMTERT 109
Query: 293 IVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFE 352
I WN+++ + G ++++++ EM GV D T VL AC G+ + G EI
Sbjct: 110 IFTWNAMMGAFVSSGKYLEAIELYKEMRVLGVAIDACTFPSVLKACGALGESRLGAEIHG 169
Query: 353 SMKSKYLVEPKTEHYAC--MVDLLGRAGQVEDAMKLIEAMPFEP-DAIIWGSLLGA 405
E + C ++ + G+ G + A L + + E D + W S++ A
Sbjct: 170 VAVKCGFGEFV---FVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISA 222
>gi|326529685|dbj|BAK04789.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 879
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 227/618 (36%), Positives = 351/618 (56%), Gaps = 19/618 (3%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDA---- 56
+P+ +VVSW A + G V G A L QM +V L ++ A
Sbjct: 263 VPKTDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGAGAGAFA 322
Query: 57 --RRLFDMM----PEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYV 110
R++ M + D +V Y + G +D+ R++F+ +P+K+++ W +ISG
Sbjct: 323 LGRQIHGFMIKACADSDDYIGVALVDMYAKYGLLDDARKVFEWIPRKDLLLWNALISGCS 382
Query: 111 NNNRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNS 166
+ + LF M ++ N + A+L I D ++ ++ +
Sbjct: 383 HGGCHGESLSLFCRMRKEGSDINRTTLAAVLKSTASLEAISDTTQVHALAEKIGFLSDSH 442
Query: 167 MILGLGQN----GEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEG 222
++ GL + ++ A VF++ + ++ MI + + + I LF M ++G
Sbjct: 443 VVNGLIDSYWKCNCLRYANKVFEEHSSDNIIAFTSMITALSQCDHGEDAIKLFMEMLRKG 502
Query: 223 VRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGK 282
+ + L S+L+ CASL++ + G+QVHA L++ +F DV+ + L+ Y KCG +
Sbjct: 503 LEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRKFMTDVFAGNALVYTYAKCGSIEDAD 562
Query: 283 LIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTG 342
L F K +V W+++I G AQ+G G+++L VF M + P+ +TL VL AC++ G
Sbjct: 563 LAFSGLPDKGVVSWSAMIGGLAQHGHGKRALDVFRRMVDERIAPNHITLTSVLCACNHAG 622
Query: 343 KVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSL 402
V E + F SMK + ++ EHY+CM+DLLGRAG+++DAM+L+ +MPFE +A +WG+L
Sbjct: 623 LVDEAKGYFSSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFEANAAVWGAL 682
Query: 403 LGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVI 462
L A R H +L ++AA+KL LEP+ +G ++LL+N YAS G + +VA++RK M+ V
Sbjct: 683 LAASRVHRDPELGKLAAEKLFVLEPEKSGTHVLLANTYASAGMWDEVAKVRKLMKDSKVK 742
Query: 463 KPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDE 522
K P SW+E++ +VH F D SHP I LE++G L+ +AGY P+ LHDVD+
Sbjct: 743 KEPAMSWVELKDRVHTFIVGD-KSHPRARDIYAKLEELGDLMSKAGYVPNLEVDLHDVDK 801
Query: 523 EEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRD 582
EK L +HSE+LAVA+ L+ P G PIRV KNLR+C DCH A K ISK++ REII+RD
Sbjct: 802 SEKELLLSHHSERLAVAFALISTPAGAPIRVKKNLRICRDCHVAFKFISKIVSREIIIRD 861
Query: 583 ANRFHHFKDGLCSCRDYW 600
NRFHHF DG CSC DYW
Sbjct: 862 INRFHHFSDGACSCGDYW 879
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 99/346 (28%), Positives = 169/346 (48%), Gaps = 11/346 (3%)
Query: 70 AQTNMVLGYCQDGRV-DEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEK 128
A N +L + R+ R +FDE P +SW+++++ Y NN A F M +
Sbjct: 38 AFRNHLLSFYSKCRLPGSARRVFDETPDPCHVSWSSLVTAYSNNALPREALAAFRAMRAR 97
Query: 129 ----NEVSWTAMLMGYTQCGR-IQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVV 183
NE + +L G +Q + +N+++ G G V +AR V
Sbjct: 98 GVRCNEFALPIVLKCAPDAGLGVQVHAVAVSTGLSGDIFVANALVAMYGGFGFVDEARRV 157
Query: 184 FDQM-REKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLAS 242
FD+ R+++ +W+GM+ + + + ++LF M GVR N V++ C
Sbjct: 158 FDEAARDRNAVSWNGMMSAFVKNDRCSDAVELFGEMVWSGVRPNEFGFSCVVNACTGSRD 217
Query: 243 LDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISG 302
L+ GR+VHA +VR +D DV+ A+ L+ MY K G++ L+F D+V WN+ ISG
Sbjct: 218 LEAGRKVHAMVVRTGYDKDVFTANALVDMYSKLGDIHMAALVFGKVPKTDVVSWNAFISG 277
Query: 303 YAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLS--ACSYTGKVKEGREIFESMKSKYLV 360
+G + +L++ +M SSG++P+ TL +L A + G GR+I M K
Sbjct: 278 CVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGAGAGAFALGRQIHGFM-IKACA 336
Query: 361 EPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGAC 406
+ +VD+ + G ++DA K+ E +P D ++W +L+ C
Sbjct: 337 DSDDYIGVALVDMYAKYGLLDDARKVFEWIP-RKDLLLWNALISGC 381
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 106/426 (24%), Positives = 188/426 (44%), Gaps = 22/426 (5%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLF----WQMPEKNVVSWTVMLGGFIRDSRIDDARR 58
+RN VSW M+ +V+ ++A LF W N ++ ++ ++ R+
Sbjct: 164 DRNAVSWNGMMSAFVKNDRCSDAVELFGEMVWSGVRPNEFGFSCVVNACTGSRDLEAGRK 223
Query: 59 LFDMMP----EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNR 114
+ M+ +KDV +V Y + G + +F ++PK +V+SW ISG V +
Sbjct: 224 VHAMVVRTGYDKDVFTANALVDMYSKLGDIHMAALVFGKVPKTDVVSWNAFISGCVLHGH 283
Query: 115 IDVARKLFEVMPEKNEVSWTAMLMGYTQCGRI----------QDAWELFKAMPMKSVVAS 164
A +L M V L + Q + KA
Sbjct: 284 DQHALELLLQMKSSGLVPNVFTLSSILKACAGAGAGAFALGRQIHGFMIKACADSDDYIG 343
Query: 165 NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVR 224
+++ + G + AR VF+ + KD W+ +I G E + LF M+KEG
Sbjct: 344 VALVDMYAKYGLLDDARKVFEWIPRKDLLLWNALISGCSHGGCHGESLSLFCRMRKEGSD 403
Query: 225 VNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLI 284
+N +L +VL ASL ++ QVHA + F D +V + LI Y KC L +
Sbjct: 404 INRTTLAAVLKSTASLEAISDTTQVHALAEKIGFLSDSHVVNGLIDSYWKCNCLRYANKV 463
Query: 285 FDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKV 344
F+ +S +I+ + S+I+ +Q GE ++K+F EM G+ PD L +L+AC+
Sbjct: 464 FEEHSSDNIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAY 523
Query: 345 KEGREIFESM-KSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
++G+++ + K K++ + + +V + G +EDA +P + + W +++
Sbjct: 524 EQGKQVHAHLIKRKFMTDVFAGN--ALVYTYAKCGSIEDADLAFSGLP-DKGVVSWSAMI 580
Query: 404 GACRTH 409
G H
Sbjct: 581 GGLAQH 586
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 116/457 (25%), Positives = 193/457 (42%), Gaps = 51/457 (11%)
Query: 2 PERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIR---DSRIDDARR 58
P+ VSW+++V Y + EA F M + V L ++ D+ +
Sbjct: 64 PDPCHVSWSSLVTAYSNNALPREALAAFRAMRARGVRCNEFALPIVLKCAPDAGLGVQVH 123
Query: 59 LFDMMP--EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPK-KNVISWTTMISGYVNNNRI 115
+ D+ +V Y G VDE R +FDE + +N +SW M+S +V N+R
Sbjct: 124 AVAVSTGLSGDIFVANALVAMYGGFGFVDEARRVFDEAARDRNAVSWNGMMSAFVKNDRC 183
Query: 116 DVARKLFEVM----PEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPM-----KSVVASNS 166
A +LF M NE ++ ++ T R +A AM + K V +N+
Sbjct: 184 SDAVELFGEMVWSGVRPNEFGFSCVVNACTG-SRDLEAGRKVHAMVVRTGYDKDVFTANA 242
Query: 167 MILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVN 226
++ + G++ A +VF ++ + D +W+ I G++ ++L M+ G+ N
Sbjct: 243 LVDMYSKLGDIHMAALVFGKVPKTDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPN 302
Query: 227 FPSLISVLS--VCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLI 284
+L S+L A + GRQ+H +++ D D Y+ L+ MY K G L + +
Sbjct: 303 VFTLSSILKACAGAGAGAFALGRQIHGFMIKACADSDDYIGVALVDMYAKYGLLDDARKV 362
Query: 285 FDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLS------AC 338
F+ KD+++WN++ISG + G +SL +F M G + TL VL A
Sbjct: 363 FEWIPRKDLLLWNALISGCSHGGCHGESLSLFCRMRKEGSDINRTTLAAVLKSTASLEAI 422
Query: 339 SYTGKVKEGREIFESMKSKYLVEPKTEHY------------------------ACMVDLL 374
S T +V E + ++V + Y M+ L
Sbjct: 423 SDTTQVHALAEKIGFLSDSHVVNGLIDSYWKCNCLRYANKVFEEHSSDNIIAFTSMITAL 482
Query: 375 GRAGQVEDAMKLIEAM---PFEPDAIIWGSLLGACRT 408
+ EDA+KL M EPD + SLL AC +
Sbjct: 483 SQCDHGEDAIKLFMEMLRKGLEPDPFVLSSLLNACAS 519
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 127/262 (48%), Gaps = 10/262 (3%)
Query: 180 ARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCAS 239
AR VFD+ + +WS ++ Y E + F M+ GVR N +L VL CA
Sbjct: 56 ARRVFDETPDPCHVSWSSLVTAYSNNALPREALAAFRAMRARGVRCNEFALPIVLK-CAP 114
Query: 240 LASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFA-SKDIVMWNS 298
A L G QVHA V D++VA+ L+ MY G + + + +FD A ++ V WN
Sbjct: 115 DAGL--GVQVHAVAVSTGLSGDIFVANALVAMYGGFGFVDEARRVFDEAARDRNAVSWNG 172
Query: 299 IISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKY 358
++S + + ++++F EM SGV P++ V++AC+ + ++ GR++ +M +
Sbjct: 173 MMSAFVKNDRCSDAVELFGEMVWSGVRPNEFGFSCVVNACTGSRDLEAGRKV-HAMVVRT 231
Query: 359 LVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVA 418
+ +VD+ + G + A + +P + D + W + + C H + A
Sbjct: 232 GYDKDVFTANALVDMYSKLGDIHMAALVFGKVP-KTDVVSWNAFISGCVLHGH---DQHA 287
Query: 419 AKKLLQLEPKNAGPYIL-LSNI 439
+ LLQ++ P + LS+I
Sbjct: 288 LELLLQMKSSGLVPNVFTLSSI 309
Score = 42.0 bits (97), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 79/177 (44%), Gaps = 6/177 (3%)
Query: 229 SLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNF 288
S+ +L+ A+ SL G +HA L++ + + + L++ Y KC + +FD
Sbjct: 6 SISPLLTRYAATQSLFLGAHIHAHLLKSGL-LHAF-RNHLLSFYSKCRLPGSARRVFDET 63
Query: 289 ASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGR 348
V W+S+++ Y+ L ++L F M + GV ++ L VL G G
Sbjct: 64 PDPCHVSWSSLVTAYSNNALPREALAAFRAMRARGVRCNEFALPIVLKCAPDAGL---GV 120
Query: 349 EIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
++ S L A +V + G G V++A ++ + + +A+ W ++ A
Sbjct: 121 QVHAVAVSTGLSGDIFVANA-LVAMYGGFGFVDEARRVFDEAARDRNAVSWNGMMSA 176
>gi|115463097|ref|NP_001055148.1| Os05g0305300 [Oryza sativa Japonica Group]
gi|113578699|dbj|BAF17062.1| Os05g0305300 [Oryza sativa Japonica Group]
Length = 852
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 225/589 (38%), Positives = 347/589 (58%), Gaps = 31/589 (5%)
Query: 41 TVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNV- 99
++ + + +++A ++F+MM KDVV+ MV GY Q G E+F M K+N+
Sbjct: 266 NALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIP 325
Query: 100 ---ISWTTMISGY----VNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWEL 152
++WT +I+GY ++ ++V R++ N V+ ++L G E+
Sbjct: 326 LDMVTWTAVIAGYSQRGCSHEALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEI 385
Query: 153 FKAMPMKSVVAS---------------NSMILGLGQNGEVQKARVVFDQ--MREKDDATW 195
A +K+ + + N++I + + AR +FD + E++ TW
Sbjct: 386 -HAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTW 444
Query: 196 SGMIKVYERKGYELEVIDLFTLMQKE--GVRVNFPSLISVLSVCASLASLDHGRQVHAQL 253
+ MI + + G + + LF M E GV N ++ +L CA LA++ G+Q+HA +
Sbjct: 445 TVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYV 504
Query: 254 VRC-QFDVDVY-VASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEK 311
+R Q+D Y VA+ LI MY KCG++ + +FD+ + K + W S+++GY +G G +
Sbjct: 505 LRHHQYDSSAYFVANCLINMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSE 564
Query: 312 SLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMV 371
+L +F +M +G +PDD+T + VL ACS+ G V +G F+SM + Y + P+ EHYA +
Sbjct: 565 ALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYAYAI 624
Query: 372 DLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAG 431
DLL R G+++ A K ++ MP EP A++W +LL ACR H ++LAE A KL+++ +N G
Sbjct: 625 DLLARFGRLDKAWKTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAENDG 684
Query: 432 PYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHP 491
Y L+SNIYA+ GR+ DVA +R M+K + K PGCSW++ +K F D SHP P
Sbjct: 685 SYTLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCSWVQGQKGTASFFVGD-RSHPLSP 743
Query: 492 MIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPI 551
I +LE + ++ GY P+++F LHDVDEEEK + L HSEKLA+AYGL+ G PI
Sbjct: 744 QIYALLESLIDRIKAMGYVPETNFALHDVDEEEKNNLLVEHSEKLALAYGLLTTFPGCPI 803
Query: 552 RVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
R+ KNLRVCGDCHSA ISK++ EI++RD +RFHHFK+G CSC YW
Sbjct: 804 RITKNLRVCGDCHSAFTYISKIVDHEIVVRDPSRFHHFKNGSCSCGGYW 852
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 89/428 (20%), Positives = 179/428 (41%), Gaps = 73/428 (17%)
Query: 72 TNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRID----VARKLFEVMPE 127
T +V Y G D + + + + W +I ++ R+D V+ ++
Sbjct: 55 TGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTR 114
Query: 128 KNEVSWTAMLMGYTQCGRIQD--AWELFKAMPM-----KSVVASNSMILGLGQNGEVQKA 180
+ + +L CG + F + +V N+++ + G +++A
Sbjct: 115 LDHFTLPHVL---KACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEA 171
Query: 181 RVVFDQMREK---DDATWSGMIKVYERKGYELEVIDLFTLM------QKEGVRVNFPSLI 231
++FD++ ++ D +W+ ++ + + +DLF+ M + R + S++
Sbjct: 172 SMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIV 231
Query: 232 SVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASK 291
++L C SL ++ ++VH +R +DV+V + LI Y KCG + +F+ K
Sbjct: 232 NILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFK 291
Query: 292 DIVMWNS-----------------------------------IISGYAQYGLGEKSLKVF 316
D+V WN+ +I+GY+Q G ++L VF
Sbjct: 292 DVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVF 351
Query: 317 HEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFE-SMKSKYLV--------EPKTEHY 367
+M SG +P+ VT++ VLSAC+ G +G EI S+K+ L + Y
Sbjct: 352 RQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVY 411
Query: 368 ACMVDLLGRAGQVEDAMKLIEAMPFEP-DAIIWGSLLGACRTHMKLDLAEVAAKKLLQL- 425
++D+ + + A + + +P E + + W ++G H + + A K +++
Sbjct: 412 NALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGG---HAQYGDSNDALKLFVEMI 468
Query: 426 -EPKNAGP 432
EP P
Sbjct: 469 SEPYGVAP 476
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 108/460 (23%), Positives = 176/460 (38%), Gaps = 108/460 (23%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV----VSWTVMLGGFIRDSRIDDA 56
M ++VVSW AMV GY + G A LF M ++N+ V+WT ++ G+ + +A
Sbjct: 288 MEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEA 347
Query: 57 RRLFDMMPEKDVVAQTNM---VLGYCQD-GRVDEGREIFDEMPKKNVIS----------- 101
+F M + VL C G +G EI K +++
Sbjct: 348 LNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDED 407
Query: 102 ---WTTMISGYVNNNRIDVARKLFEVMP--EKNEVSWTAMLMGYTQCGRIQDAWELFKAM 156
+ +I Y AR +F+ +P E+N V+WT M+ G+ Q G DA +LF M
Sbjct: 408 LMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEM 467
Query: 157 --------PMKSVVA-----------------------------------SNSMILGLGQ 173
P ++ +N +I +
Sbjct: 468 ISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSK 527
Query: 174 NGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISV 233
G+V AR VFD M +K +W+ M+ Y G E +D+F M+K G + + + V
Sbjct: 528 CGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVV 587
Query: 234 LSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDI 293
L C+ +D G FD +M G + +
Sbjct: 588 LYACSHCGMVDQGLS--------YFD----------SMSADYGLTPRAE----------- 618
Query: 294 VMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFES 353
+ I A++G +K+ K +M + P V V +LSAC +V E+ E
Sbjct: 619 -HYAYAIDLLARFGRLDKAWKTVKDM---PMEPTAVVWVALLSAC----RVHSNVELAEH 670
Query: 354 MKSKYLVEPKTEH---YACMVDLLGRAGQVEDAMKLIEAM 390
+K LVE E+ Y + ++ AG+ +D ++ M
Sbjct: 671 ALNK-LVEMNAENDGSYTLISNIYATAGRWKDVARIRHLM 709
>gi|302815813|ref|XP_002989587.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
gi|300142765|gb|EFJ09463.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
Length = 736
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 235/626 (37%), Positives = 354/626 (56%), Gaps = 35/626 (5%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEK-------NVVSWTVMLG-----GFI 48
M ++ +V+W A++ GY G A ++ M K + ++++ L G I
Sbjct: 120 MGKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACTVVGDI 179
Query: 49 RDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISG 108
R +AR + D + Q ++ Y + G ++ R++FD + ++VI+W TMISG
Sbjct: 180 SQGREIEARTVASGYA-SDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISG 238
Query: 109 YVNNNRIDVARKLFEVM----PEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMK----- 159
Y A +LF+ M P+ N V++ +L T C ++D E +A+ K
Sbjct: 239 YAKQGAATQALELFQRMGPNDPKPNVVTFIGLL---TACTNLED-LEQGRAIHRKVREDG 294
Query: 160 ---SVVASNSMI-LGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLF 215
+V N ++ + + +++AR VF++MR +D TW+ +I Y + G + +D+F
Sbjct: 295 YESDLVIGNVLLNMYTKCSSSLEEARQVFERMRTRDVITWNILIVAYVQYGQAKDALDIF 354
Query: 216 TLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKC 275
MQ E V N +L +VLS CA L + G+ VHA + + DV + + L+ MY +C
Sbjct: 355 KQMQLENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRC 414
Query: 276 GELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVL 335
G L +F K +V W+++I+ YAQ+G L+ F E+ G+ DDVT+V L
Sbjct: 415 GSLDDTVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTL 474
Query: 336 SACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPD 395
SACS+ G +KEG + F SM + + P H+ CMVDLL RAG++E A LI MPF PD
Sbjct: 475 SACSHGGMLKEGVQTFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPD 534
Query: 396 AIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYI-LLSNIYASQGRFHDVAELRK 454
A+ W SLL C+ H A A KL +LE ++ + LLSN+YA GR+ DV RK
Sbjct: 535 AVAWTSLLSGCKLHNDTKRAARVADKLFELESEDEHSTVTLLSNVYAEAGRWDDV---RK 591
Query: 455 NMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSS 514
+R K PGCS+IE+ VH F D SHPE +I ++++ +++AGY PD
Sbjct: 592 TRNRRAARKNPGCSYIEINDTVHEFVAGD-KSHPEEELIAAEIKRLSKQMKDAGYVPDMR 650
Query: 515 FVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVM 574
VLH+V EEEK L YHSEKLA+AYGL+ P G P+ ++KNLR C DCH+A K IS+++
Sbjct: 651 MVLHNVKEEEKEQMLCYHSEKLAIAYGLISTPPGTPLHIVKNLRACVDCHAAAKFISRIV 710
Query: 575 GREIILRDANRFHHFKDGLCSCRDYW 600
GR+I++RD+ RFHHF++G CSC+DYW
Sbjct: 711 GRKIVVRDSTRFHHFENGSCSCKDYW 736
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 110/427 (25%), Positives = 210/427 (49%), Gaps = 25/427 (5%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV----VSWTVMLGGFIRDSRIDDARRLF 60
N VSWT +V + G EA + +M + + + V +G + + L
Sbjct: 22 NSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAMFVVAIGVCSSSKDLKQGQLLH 81
Query: 61 DMMPEK-----DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRI 115
M+ E D++ T ++ Y + ++ R+ FDEM KK +++W +I+GY N
Sbjct: 82 AMILETRLLEFDIILGTALITMYARCRDLELARKTFDEMGKKTLVTWNALIAGYSRNGDH 141
Query: 116 DVARKLFEVMPEK-------NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMI 168
A K+++ M K + +++++ L T G I E+ +A + S AS+S++
Sbjct: 142 RGALKIYQDMVSKSPEGMKPDAITFSSALYACTVVGDISQGREI-EARTVASGYASDSIV 200
Query: 169 LGLGQN-----GEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGV 223
N G ++ AR VFD+++ +D W+ MI Y ++G + ++LF M
Sbjct: 201 QNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYAKQGAATQALELFQRMGPNDP 260
Query: 224 RVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKC-GELVKGK 282
+ N + I +L+ C +L L+ GR +H ++ ++ D+ + +VL+ MY KC L + +
Sbjct: 261 KPNVVTFIGLLTACTNLEDLEQGRAIHRKVREDGYESDLVIGNVLLNMYTKCSSSLEEAR 320
Query: 283 LIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTG 342
+F+ ++D++ WN +I Y QYG + +L +F +M V P+++TL VLSAC+ G
Sbjct: 321 QVFERMRTRDVITWNILIVAYVQYGQAKDALDIFKQMQLENVAPNEITLSNVLSACAVLG 380
Query: 343 KVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSL 402
++G+ + + S + M ++ R G ++D + + A+ + + W +L
Sbjct: 381 AKRQGKAVHALIASGRCKADVVLENSLM-NMYNRCGSLDDTVGVFAAIR-DKSLVSWSTL 438
Query: 403 LGACRTH 409
+ A H
Sbjct: 439 IAAYAQH 445
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 136/269 (50%), Gaps = 11/269 (4%)
Query: 172 GQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLI 231
G+ G V A VF + + +W+ ++ + R G+ E + + M EG+R + +
Sbjct: 3 GKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAMFV 62
Query: 232 SVLSVCASLASLDHGRQVHAQLVRCQF-DVDVYVASVLITMYIKCGELVKGKLIFDNFAS 290
+ VC+S L G+ +HA ++ + + D+ + + LITMY +C +L + FD
Sbjct: 63 VAIGVCSSSKDLKQGQLLHAMILETRLLEFDIILGTALITMYARCRDLELARKTFDEMGK 122
Query: 291 KDIVMWNSIISGYAQYGLGEKSLKVFHEMFS---SGVMPDDVTLVGVLSACSYTGKVKEG 347
K +V WN++I+GY++ G +LK++ +M S G+ PD +T L AC+ G + +G
Sbjct: 123 KTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACTVVGDISQG 182
Query: 348 REI-FESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGAC 406
REI ++ S Y + ++ ++++ + G +E A K+ + + D I W +++
Sbjct: 183 REIEARTVASGYASDSIVQN--ALINMYSKCGSLESARKVFDRLK-NRDVIAWNTMISG- 238
Query: 407 RTHMKLDLAEVAAKKLLQLEPKNAGPYIL 435
+ K A A + ++ P + P ++
Sbjct: 239 --YAKQGAATQALELFQRMGPNDPKPNVV 265
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/235 (20%), Positives = 87/235 (37%), Gaps = 48/235 (20%)
Query: 271 MYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVT 330
MY KCG + +F + V W I++ +A+ G ++L + M G+ PD
Sbjct: 1 MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60
Query: 331 LVGVLSACSYTGKVKEG------------------------------------REIFESM 354
V + CS + +K+G R+ F+ M
Sbjct: 61 FVVAIGVCSSSKDLKQGQLLHAMILETRLLEFDIILGTALITMYARCRDLELARKTFDEM 120
Query: 355 KSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAM------PFEPDAIIWGSLLGACRT 408
K LV + ++ R G A+K+ + M +PDAI + S L AC
Sbjct: 121 GKKTLVT-----WNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACTV 175
Query: 409 HMKLDLA-EVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVI 462
+ E+ A+ + ++ L N+Y+ G ++ ++ R+VI
Sbjct: 176 VGDISQGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVI 230
>gi|347954520|gb|AEP33760.1| organelle transcript processing 82, partial [Capsella
bursa-pastoris]
Length = 706
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 232/645 (35%), Positives = 366/645 (56%), Gaps = 50/645 (7%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPE----KNVVSWTVMLGGFIRDSRIDDA 56
+ E N++ W M RG+ A L+ M N ++ +L + +
Sbjct: 63 IQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLVPNSYTFPFLLKACAKSKAFREG 122
Query: 57 RRL----FDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+++ + + D+ T+++ Y ++GR ++ R++FD+ ++V+S+T +I GY +N
Sbjct: 123 QQIHGHVLKLGCDLDLYVHTSLIAMYVKNGRXEDARKVFDQSSHRDVVSYTALIKGYASN 182
Query: 113 NRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMIL--- 169
I A+K+F+ +P K+ VSW A++ GY + G ++A ELFK M +V S ++
Sbjct: 183 GYIXSAQKMFDEIPVKDVVSWNALISGYAETGNYKEALELFKEMMKTNVKPDESTMVTVL 242
Query: 170 ----------------------GLGQN--------------GEVQKARVVFDQMREKDDA 193
G G N GEV+ A +F+ + KD
Sbjct: 243 SACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETASGLFEGLSYKDVI 302
Query: 194 TWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQL 253
+W+ +I Y E + LF M + G N +++S+L CA L ++D GR +H +
Sbjct: 303 SWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNEVTMLSILPACAHLGAIDIGRWIHVYI 362
Query: 254 VRCQFDVD--VYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEK 311
+ V + + LI MY KCG++ + +FD+ ++ + WN++I G+A +G
Sbjct: 363 DKRLKGVSNPSSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANP 422
Query: 312 SLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMV 371
+ +F M G+ PDD+T VG+LSACS++G + GR IF SM Y + PK EHY CM+
Sbjct: 423 AFDIFSRMRKDGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTEDYKITPKLEHYGCMI 482
Query: 372 DLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAG 431
DLLG +G ++A ++I +M +PD +IW SLL AC+ H ++L E A+ L+++EPKN+G
Sbjct: 483 DLLGHSGLFKEAEEMINSMEMDPDGVIWCSLLKACKMHGNVELGESFAQNLIKIEPKNSG 542
Query: 432 PYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHP 491
Y+LLSNIYA+ GR+++VA+ R + + + K PGCS IE++ VH F D + HP +
Sbjct: 543 SYVLLSNIYATAGRWNEVAKRRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKL-HPRNR 601
Query: 492 MIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPI 551
I MLE++ LL EAG+ PD+S VL +++EE K +LR+HSEKLA+A+GL+ G +
Sbjct: 602 EIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKL 661
Query: 552 RVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSC 596
++KNLRVC +CH A KLISK+ REII RD RFHHF DG+CSC
Sbjct: 662 TIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFXDGVCSC 706
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 114/467 (24%), Positives = 208/467 (44%), Gaps = 84/467 (17%)
Query: 90 IFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVM------PEKNEVSW---------- 133
+FD + + N++ W TM G+ ++ A L+ M P +
Sbjct: 59 VFDSIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLVPNSYTFPFLLKACAKSKA 118
Query: 134 -----------------------TAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILG 170
T+++ Y + GR +DA ++F + VV+ ++I G
Sbjct: 119 FREGQQIHGHVLKLGCDLDLYVHTSLIAMYVKNGRXEDARKVFDQSSHRDVVSYTALIKG 178
Query: 171 LGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSL 230
NG + A+ +FD++ KD +W+ +I Y G E ++LF M K V+ + ++
Sbjct: 179 YASNGYIXSAQKMFDEIPVKDVVSWNALISGYAETGNYKEALELFKEMMKTNVKPDESTM 238
Query: 231 ISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFAS 290
++VLS CA AS++ GRQVH+ + F ++ + + LI +YIKCGE+ +F+ +
Sbjct: 239 VTVLSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETASGLFEGLSY 298
Query: 291 KDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGR-- 348
KD++ WN++I GY L +++L +F EM SG P++VT++ +L AC++ G + GR
Sbjct: 299 KDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNEVTMLSILPACAHLGAIDIGRWI 358
Query: 349 EIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAM------------------ 390
++ + K + P + + ++D+ + G +E A ++ ++M
Sbjct: 359 HVYIDKRLKGVSNPSSLRTS-LIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMH 417
Query: 391 ----------------PFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQ---LEPKNAG 431
EPD I + LL AC LDL + + + + PK
Sbjct: 418 GRANPAFDIFSRMRKDGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTEDYKITPK-LE 476
Query: 432 PYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHM 478
Y + ++ G F + E+ +M + P G W + K M
Sbjct: 477 HYGCMIDLLGHSGLFKEAEEMINSME----MDPDGVIWCSLLKACKM 519
>gi|225432742|ref|XP_002279134.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22690
[Vitis vinifera]
Length = 836
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 234/650 (36%), Positives = 365/650 (56%), Gaps = 55/650 (8%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV----VSWTVMLGGFIRDSRIDDA 56
M ERNVVSWT+++ GY EA +LF++M E + V+ ++ + +D
Sbjct: 192 MSERNVVSWTSLICGYARGDRPKEAVSLFFEMVEAGIRPSSVTMVCVISACAKLRDLDMG 251
Query: 57 RRLFDMMPEKDVVAQTNMVLG----YCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
R+ + E + MV Y + G +D + +FDE +N++ + T++S Y
Sbjct: 252 ERVCAYIGELGLKLNKVMVNALVDMYMKCGAIDAAKRLFDECVDRNLVLYNTILSNYA-- 309
Query: 113 NRIDVARKLFEVMPEK-------------NEVSWTAMLMG-------------------- 139
R +AR+ ++ E + +S +A L+
Sbjct: 310 -RQGLAREALAILDEMLQQGPRPDRVTMLSAISASAQLVDLFYGKVCHGYVIRNGLEGWD 368
Query: 140 ---------YTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREK 190
Y +CG+ + A +F M K+VV+ NS+ G +NG+V+ A VF+Q+ E+
Sbjct: 369 SIGNVIIDMYMKCGKPEMACRVFDLMSNKTVVSWNSLTAGFIRNGDVESAWEVFNQIPER 428
Query: 191 DDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVH 250
+ W+ MI +K + I+LF MQ EG++ + +++ + S C L + + + VH
Sbjct: 429 NAVFWNTMISGLVQKSLFEDAIELFREMQGEGIKADRVTMMGIASACGYLGAPELAKWVH 488
Query: 251 AQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGE 310
+ + D+ + + L+ M+ +CG+ +F+ +D+ W + I A G GE
Sbjct: 489 TYIEKNGIPCDMRLNTALVDMFARCGDPQSAMQVFNKMTERDVSAWTAAIGTMAMEGNGE 548
Query: 311 KSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACM 370
+ +F++M GV PD V V VL+ACS+ G+V++G IF S+ + + P+ EHY CM
Sbjct: 549 GATGLFNQMLIQGVKPDVVLFVQVLTACSHGGQVEQGLHIF-SLMEDHGISPQIEHYGCM 607
Query: 371 VDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNA 430
VDLLGRAG + +A LI++MP EP+ ++WGSLL ACR H +++A AA+++ +L P+ A
Sbjct: 608 VDLLGRAGLLREAFDLIKSMPMEPNDVVWGSLLAACRVHKNVEMATYAAERINELAPQRA 667
Query: 431 GPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEH 490
G ++LLSNIYAS G++ DVA +R N+R++ V K PG S ++V +H FT D SHPE
Sbjct: 668 GVHVLLSNIYASAGKWTDVARVRLNLREKGVRKVPGSSSVQVNGVIHEFTSGD-ESHPEM 726
Query: 491 PMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVP 550
I ML+++ +AG+ PD S VL DVDE+EK + L HSEKLA+A+GL+ +P
Sbjct: 727 THIALMLQEMNCRFSDAGHIPDLSNVLLDVDEQEKEYLLSRHSEKLAIAFGLIATGRSMP 786
Query: 551 IRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
IRV+KNLR+C DCHS K+ S + REII+RD NRFH F+ GLCSC DYW
Sbjct: 787 IRVVKNLRMCSDCHSFAKMASIIYNREIIVRDNNRFHFFRQGLCSCCDYW 836
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 106/443 (23%), Positives = 205/443 (46%), Gaps = 49/443 (11%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQM----PEKNVVSWTVMLGGFIRDSRIDDARRL----FD 61
+++RGY G+ EA L+ +M N ++ +L G + + + ++
Sbjct: 100 NSLIRGYSSAGLGREAILLYVRMLVLGVTPNHYTFPFVLSGCTKIAAFCEGIQVHGSVVK 159
Query: 62 MMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKL 121
M E+DV Q ++ Y + G +D G ++F+ M ++NV+SWT++I GY +R A L
Sbjct: 160 MGLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSERNVVSWTSLICGYARGDRPKEAVSL 219
Query: 122 FEVMPEKN-EVSWTAMLMGYTQCGRIQD------AWELFKAMPMK-SVVASNSMILGLGQ 173
F M E S M+ + C +++D + +K + V N+++ +
Sbjct: 220 FFEMVEAGIRPSSVTMVCVISACAKLRDLDMGERVCAYIGELGLKLNKVMVNALVDMYMK 279
Query: 174 NGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISV 233
G + A+ +FD+ +++ ++ ++ Y R+G E + + M ++G R + +++S
Sbjct: 280 CGAIDAAKRLFDECVDRNLVLYNTILSNYARQGLAREALAILDEMLQQGPRPDRVTMLSA 339
Query: 234 LSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCG---------ELVKGKL- 283
+S A L L +G+ H ++R + + +V+I MY+KCG +L+ K
Sbjct: 340 ISASAQLVDLFYGKVCHGYVIRNGLEGWDSIGNVIIDMYMKCGKPEMACRVFDLMSNKTV 399
Query: 284 ---------------------IFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSS 322
+F+ ++ V WN++ISG Q L E ++++F EM
Sbjct: 400 VSWNSLTAGFIRNGDVESAWEVFNQIPERNAVFWNTMISGLVQKSLFEDAIELFREMQGE 459
Query: 323 GVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVED 382
G+ D VT++G+ SAC Y G + + + ++ K + +VD+ R G +
Sbjct: 460 GIKADRVTMMGIASACGYLGAPELAKWVHTYIE-KNGIPCDMRLNTALVDMFARCGDPQS 518
Query: 383 AMKLIEAMPFEPDAIIWGSLLGA 405
AM++ M E D W + +G
Sbjct: 519 AMQVFNKMT-ERDVSAWTAAIGT 540
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 87/346 (25%), Positives = 160/346 (46%), Gaps = 27/346 (7%)
Query: 129 NEVSWTAMLMGYTQ----CGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVF 184
N ++ +L G T+ C IQ + K + V N +I + G + VF
Sbjct: 130 NHYTFPFVLSGCTKIAAFCEGIQVHGSVVKMGLEEDVFIQNCLIHFYAECGHMDHGHKVF 189
Query: 185 DQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLD 244
+ M E++ +W+ +I Y R E + LF M + G+R + +++ V+S CA L LD
Sbjct: 190 EGMSERNVVSWTSLICGYARGDRPKEAVSLFFEMVEAGIRPSSVTMVCVISACAKLRDLD 249
Query: 245 HGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYA 304
G +V A + ++ + + L+ MY+KCG + K +FD +++V++N+I+S YA
Sbjct: 250 MGERVCAYIGELGLKLNKVMVNALVDMYMKCGAIDAAKRLFDECVDRNLVLYNTILSNYA 309
Query: 305 QYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACS-----YTGKVKEGREIFESMKSKYL 359
+ GL ++L + EM G PD VT++ +SA + + GKV G Y+
Sbjct: 310 RQGLAREALAILDEMLQQGPRPDRVTMLSAISASAQLVDLFYGKVCHG----------YV 359
Query: 360 VEPKTEHY----ACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLA 415
+ E + ++D+ + G+ E A ++ + M + W SL ++
Sbjct: 360 IRNGLEGWDSIGNVIIDMYMKCGKPEMACRVFDLMS-NKTVVSWNSLTAG---FIRNGDV 415
Query: 416 EVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNV 461
E A + Q+ +NA + + + + F D EL + M+ +
Sbjct: 416 ESAWEVFNQIPERNAVFWNTMISGLVQKSLFEDAIELFREMQGEGI 461
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 110/213 (51%), Gaps = 3/213 (1%)
Query: 178 QKARVVFDQMREKDDATW--SGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLS 235
+KA +F + DDA + + +I+ Y G E I L+ M GV N + VLS
Sbjct: 80 RKAFELFKEDVRSDDALFMLNSLIRGYSSAGLGREAILLYVRMLVLGVTPNHYTFPFVLS 139
Query: 236 VCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVM 295
C +A+ G QVH +V+ + DV++ + LI Y +CG + G +F+ + +++V
Sbjct: 140 GCTKIAAFCEGIQVHGSVVKMGLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSERNVVS 199
Query: 296 WNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMK 355
W S+I GYA+ ++++ +F EM +G+ P VT+V V+SAC+ + G + +
Sbjct: 200 WTSLICGYARGDRPKEAVSLFFEMVEAGIRPSSVTMVCVISACAKLRDLDMGERVCAYIG 259
Query: 356 SKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIE 388
L K A +VD+ + G ++ A +L +
Sbjct: 260 ELGLKLNKVMVNA-LVDMYMKCGAIDAAKRLFD 291
>gi|359475985|ref|XP_002281998.2| PREDICTED: pentatricopeptide repeat-containing protein At4g33170
[Vitis vinifera]
Length = 1580
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 229/617 (37%), Positives = 354/617 (57%), Gaps = 18/617 (2%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIR--DSRID--DA 56
M +++SW +M+ + + E+ LF + + + L +R S ID +
Sbjct: 965 MKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASVLRACSSLIDGLNI 1024
Query: 57 RRLFDMMPEK-----DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVN 111
R + K D T ++ Y + G+++E +F ++ W M+ GY+
Sbjct: 1025 SRQIHVHALKTGNIADSFVATTLIDVYSKSGKMEEAEFLFQNKDDLDLACWNAMMFGYII 1084
Query: 112 NNRIDVARKLFEVMPEKNEVSWTAMLMGYTQ---CGRIQDAWELFKAMPMKSVVAS---- 164
N A +LF ++ + E S L + C + D + A +K+ S
Sbjct: 1085 GNDGKKALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHV 1144
Query: 165 NSMILGLG-QNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGV 223
NS IL + + G++ A +VF+ + DD W+ MI G E + + ++ M++ V
Sbjct: 1145 NSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRV 1204
Query: 224 RVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKL 283
+ + +++ + + +L+ GRQ+HA +++ D +V + L+ MY KCG +
Sbjct: 1205 MPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYR 1264
Query: 284 IFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGK 343
+F ++I +WN+++ G AQ+G E+++ +F M S G+ PD V+ +G+LSACS+ G
Sbjct: 1265 LFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGL 1324
Query: 344 VKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
E E SM + Y +EP+ EHY+C+VD LGRAG V++A K+IE MPF+ A I +LL
Sbjct: 1325 TSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASINRALL 1384
Query: 404 GACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIK 463
GACR ++ + A +L LEP ++ Y+LLSNIYA+ R+ DV + RK M+++NV K
Sbjct: 1385 GACRIQGDVETGKRVAARLFALEPFDSAAYVLLSNIYAAANRWDDVTDARKMMKRKNVKK 1444
Query: 464 PPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEE 523
PG SWI+V+ +H+F D SHP+ +I +E++ +RE GY PD+ FVL DV++E
Sbjct: 1445 DPGFSWIDVKNMLHLFVVDD-RSHPQADIIYDKVEEMMKTIREDGYVPDTEFVLLDVEDE 1503
Query: 524 EKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDA 583
EK SL YHSEKLA+AYGL+ P IRV+KNLRVCGDCH+AIK ISKV REI+LRDA
Sbjct: 1504 EKERSLYYHSEKLAIAYGLISTPASTTIRVIKNLRVCGDCHNAIKYISKVFEREIVLRDA 1563
Query: 584 NRFHHFKDGLCSCRDYW 600
NRFHHF+DG+CSC DYW
Sbjct: 1564 NRFHHFRDGVCSCGDYW 1580
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 110/419 (26%), Positives = 192/419 (45%), Gaps = 36/419 (8%)
Query: 16 YVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFI-----RDSRIDDARRLFDMMPEKDVVA 70
Y + G ++ A +F PE+++V+W +LG + D + LF ++ + +
Sbjct: 666 YSKCGSLSSARQVFDTTPERDLVTWNAILGAYAASVDSNDGNAQEGLHLFRLL-RASLGS 724
Query: 71 QTNM----VLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN-----NRIDVARKL 121
T M VL C + E K + W +SG + N R+ AR L
Sbjct: 725 TTRMTLAPVLKLCLNSGCLWAAEGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLL 784
Query: 122 FEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNG--EVQ- 178
F+ M E++ V W ML GY Q G ++A++LF +S + + + L NG EV
Sbjct: 785 FDWMRERDVVLWNMMLKGYVQLGLEKEAFQLFSEF-HRSGLRPDEFSVQLILNGVSEVNW 843
Query: 179 -KARVVFDQMRE-------KDDAT----WSGMIKVYERKGYELEVIDLFTLMQKEGVRVN 226
+ + + DQ++ DD W+ + G I+ F M + +
Sbjct: 844 DEGKWLADQVQAYAAKLSLSDDNPDVFCWNKKLSECLWAGDNWGAIECFVNMNGLNIDYD 903
Query: 227 FPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFD 286
+L+ VL+ A L+ G+QVH V+ D DV VA+ L+ MY K G + +F+
Sbjct: 904 AVTLLVVLAAVAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFN 963
Query: 287 NFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSAC-SYTGKVK 345
+ D++ WNS+IS AQ L E+S+ +F ++ G+ PD TL VL AC S +
Sbjct: 964 DMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASVLRACSSLIDGLN 1023
Query: 346 EGREIF-ESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
R+I ++K+ + + ++D+ ++G++E+A L + + D W +++
Sbjct: 1024 ISRQIHVHALKTGNIADSFVA--TTLIDVYSKSGKMEEAEFLFQNKD-DLDLACWNAMM 1079
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 94/181 (51%), Gaps = 5/181 (2%)
Query: 164 SNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVY-----ERKGYELEVIDLFTLM 218
SN+++ + G + AR VFD E+D TW+ ++ Y G E + LF L+
Sbjct: 659 SNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAILGAYAASVDSNDGNAQEGLHLFRLL 718
Query: 219 QKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGEL 278
+ +L VL +C + L VH ++ + DV+V+ L+ +Y KCG +
Sbjct: 719 RASLGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAIKIGLEWDVFVSGALVNIYSKCGRM 778
Query: 279 VKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSAC 338
+L+FD +D+V+WN ++ GY Q GL +++ ++F E SG+ PD+ ++ +L+
Sbjct: 779 RDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQLFSEFHRSGLRPDEFSVQLILNGV 838
Query: 339 S 339
S
Sbjct: 839 S 839
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 83/176 (47%), Gaps = 7/176 (3%)
Query: 233 VLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKD 292
+L S +L G+ HA++V D ++++ L+TMY KCG L + +FD +D
Sbjct: 627 LLRTAISTHNLLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERD 686
Query: 293 IVMWNSIISGYAQY-----GLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEG 347
+V WN+I+ YA G ++ L +F + +S +TL VL C +G +
Sbjct: 687 LVTWNAILGAYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAA 746
Query: 348 REIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
E K +E +V++ + G++ DA L + M E D ++W +L
Sbjct: 747 -EGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMR-ERDVVLWNMML 800
>gi|302776474|ref|XP_002971398.1| hypothetical protein SELMODRAFT_95698 [Selaginella moellendorffii]
gi|300160530|gb|EFJ27147.1| hypothetical protein SELMODRAFT_95698 [Selaginella moellendorffii]
Length = 562
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 218/563 (38%), Positives = 327/563 (58%), Gaps = 16/563 (2%)
Query: 53 IDDARRLFDMMP----EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISG 108
+++ RR+ + + +AQ +V Y + G +DE R IF+ + ++ V+SW+ MI
Sbjct: 1 MEEGRRIHSRLSLCGFHRATIAQNGLVSMYAKCGCLDEARAIFNGILERTVVSWSAMIGA 60
Query: 109 YVNNNRIDVARKLFEVMPEKNEVSWTAMLMG--YTQCGRIQDAWE--LFKAMPMKS---- 160
Y + R A LF M V AM + CG I+D + A+ M S
Sbjct: 61 YALHGRGQEALLLFHRMRNDGRVEPNAMTFTGVFNACGVIEDLEQGREIHALAMASGELK 120
Query: 161 ---VVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTL 217
+ N+++ + G +++AR VFD M D +W+ MI LE ++LF
Sbjct: 121 SSNAILENALLNMYVRCGSLEEARKVFDTMDHPDAFSWTSMITACTENCELLEALELFHR 180
Query: 218 MQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGE 277
M EG+ +L SVL+ CA +L G+Q+H++L F V + L+ MY KCG
Sbjct: 181 MNLEGIPPTSVTLASVLNACACSGALKVGKQIHSRLDASGFHSSVLAQTALLDMYAKCGS 240
Query: 278 LVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSA 337
L +F +++ V W ++I+ AQ+G G+++L++F EM G++ D T + VL A
Sbjct: 241 LECSSKVFTAMETRNSVSWTAMIAALAQHGQGDEALELFKEMNLEGMVADATTFICVLRA 300
Query: 338 CSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAI 397
CS+ G +KE E F SM Y + P HY +D +GRAG+++DA +LI +MPF P+ +
Sbjct: 301 CSHAGLIKESLEFFHSMVEDYAIAPTETHYCRALDTIGRAGRLQDAEELIHSMPFHPETL 360
Query: 398 IWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMR 457
W +LL ACR H + + A A+ L +L P+++ Y LL N+YA+ GR+ D +RK M
Sbjct: 361 TWKTLLNACRIHSQAERATKVAELLSKLAPEDSMAYTLLGNVYAATGRYGDQMRVRKGMT 420
Query: 458 KRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVL 517
R + K PG S+IEV+ KVH F D +HP I+ LEK+GG +REAGY P++ VL
Sbjct: 421 DRGLKKVPGKSFIEVKNKVHEFVAGD-RAHPSRDEILLELEKLGGRMREAGYVPNTKDVL 479
Query: 518 HDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGRE 577
H V+EEEK + HSEKLA+A+GL+ P G P+ ++KNLRVC DCH+A K+I+K+M R
Sbjct: 480 HAVNEEEKEQLIGLHSEKLAIAFGLIATPPGTPLLIVKNLRVCSDCHAATKVIAKIMRRR 539
Query: 578 IILRDANRFHHFKDGLCSCRDYW 600
I++RD +RFHHF+DG CSC+DYW
Sbjct: 540 IVVRDTHRFHHFEDGQCSCKDYW 562
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/242 (21%), Positives = 105/242 (43%), Gaps = 21/242 (8%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
M + SWT+M+ E + EA LF +M + + +V L + A ++
Sbjct: 150 MDHPDAFSWTSMITACTENCELLEALELFHRMNLEGIPPTSVTLASVLNACACSGALKVG 209
Query: 61 DMMPEK--------DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+ + V+AQT ++ Y + G ++ ++F M +N +SWT MI+ +
Sbjct: 210 KQIHSRLDASGFHSSVLAQTALLDMYAKCGSLECSSKVFTAMETRNSVSWTAMIAALAQH 269
Query: 113 NRIDVARKLFEVMPEKNEV----SWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSM- 167
+ D A +LF+ M + V ++ +L + G I+++ E F +M +A
Sbjct: 270 GQGDEALELFKEMNLEGMVADATTFICVLRACSHAGLIKESLEFFHSMVEDYAIAPTETH 329
Query: 168 ----ILGLGQNGEVQKARVVFDQMR-EKDDATWSGMI---KVYERKGYELEVIDLFTLMQ 219
+ +G+ G +Q A + M + TW ++ +++ + +V +L + +
Sbjct: 330 YCRALDTIGRAGRLQDAEELIHSMPFHPETLTWKTLLNACRIHSQAERATKVAELLSKLA 389
Query: 220 KE 221
E
Sbjct: 390 PE 391
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 77/171 (45%), Gaps = 17/171 (9%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVV----SWTVMLGGFIRDSRIDDA 56
M RN VSWTAM+ + G EA LF +M + +V ++ +L I ++
Sbjct: 251 METRNSVSWTAMIAALAQHGQGDEALELFKEMNLEGMVADATTFICVLRACSHAGLIKES 310
Query: 57 RRLFDMMPEKDVVAQTNMVLGYC-------QDGRVDEGREIFDEMP-KKNVISWTTMISG 108
F M E +A T YC + GR+ + E+ MP ++W T+++
Sbjct: 311 LEFFHSMVEDYAIAPTET--HYCRALDTIGRAGRLQDAEELIHSMPFHPETLTWKTLLNA 368
Query: 109 YVNNNRIDVARKLFEVMPE---KNEVSWTAMLMGYTQCGRIQDAWELFKAM 156
+++ + A K+ E++ + ++ +++T + Y GR D + K M
Sbjct: 369 CRIHSQAERATKVAELLSKLAPEDSMAYTLLGNVYAATGRYGDQMRVRKGM 419
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 87/210 (41%), Gaps = 19/210 (9%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMP 64
+V++ TA++ Y + G + + +F M +N VSWT M+ + + D+A LF M
Sbjct: 224 SVLAQTALLDMYAKCGSLECSSKVFTAMETRNSVSWTAMIAALAQHGQGDEALELFKEMN 283
Query: 65 EKDVVAQTNM---VLGYC-QDGRVDEGREIFDEMPKKNVISWTTM-----ISGYVNNNRI 115
+ +VA VL C G + E E F M + I+ T + R+
Sbjct: 284 LEGMVADATTFICVLRACSHAGLIKESLEFFHSMVEDYAIAPTETHYCRALDTIGRAGRL 343
Query: 116 DVARKLFEVMPEKNE-VSWTAMLMG---YTQCGRIQDAWELFKAMPMKSVVASNSMILGL 171
A +L MP E ++W +L ++Q R EL + + +SM L
Sbjct: 344 QDAEELIHSMPFHPETLTWKTLLNACRIHSQAERATKVAEL-----LSKLAPEDSMAYTL 398
Query: 172 GQNGEVQKARVVFDQMREKDDATWSGMIKV 201
N R DQMR + T G+ KV
Sbjct: 399 LGNVYAATGR-YGDQMRVRKGMTDRGLKKV 427
>gi|242096366|ref|XP_002438673.1| hypothetical protein SORBIDRAFT_10g024090 [Sorghum bicolor]
gi|241916896|gb|EER90040.1| hypothetical protein SORBIDRAFT_10g024090 [Sorghum bicolor]
Length = 588
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 216/530 (40%), Positives = 331/530 (62%), Gaps = 16/530 (3%)
Query: 72 TNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEV 131
T +V+ Y + G +++ R + D MP++NV+SWT MISGY N R D A +LF +M
Sbjct: 74 TRLVIMYARCGALEDARNVLDGMPERNVVSWTAMISGYSQNERPDQAWELFIMM------ 127
Query: 132 SWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKD 191
+ G Q ++ A+ + + V S S++ ++ +Q+AR VFD + +D
Sbjct: 128 ----LRAGIHQVKQVH-AFAVKTNFELHMFVGS-SLLDMYAKSENIQEARRVFDMLPARD 181
Query: 192 DATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHA 251
+++ ++ Y + G + E +DLF L+ EG++ N + ++L+ + L+S+D+G+QVH
Sbjct: 182 VVSYTAILSGYTQLGLDEEALDLFRLLYNEGMQCNQVTFTALLNALSGLSSMDYGKQVHG 241
Query: 252 QLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEK 311
++R + + + + LI MY KCG+L+ + +FD+ + +V WN+++ GY ++GL +
Sbjct: 242 LILRRELPFFMALQNSLIDMYSKCGKLLYSRRVFDSMPERSVVSWNAMLMGYGRHGLAHE 301
Query: 312 SLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMV 371
+++F M V PD VTL+ VLS S+ G V EG ++F+ + + TEHY C++
Sbjct: 302 VVQLFRSMCDE-VKPDSVTLLAVLSGYSHGGLVDEGLDMFDHIVKEQSTLLNTEHYGCVI 360
Query: 372 DLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAG 431
DLLGR+GQ++ A+ LIE MPF+P IWGSLLGACR H + + E A+KLL +EP+NAG
Sbjct: 361 DLLGRSGQLQKALNLIEKMPFQPTRAIWGSLLGACRVHTNVHVGEFVAQKLLDIEPENAG 420
Query: 432 PYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVS-HPEH 490
Y++LSNIYA+ G + DV +RK M K+ VIK PG SW+ ++K +H F C HP
Sbjct: 421 NYVILSNIYAAAGMWKDVFRVRKLMLKKTVIKEPGRSWMILDKVIHTF--HSCERFHPRK 478
Query: 491 PMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVP 550
I +++I ++ AG+ PD S VLHDVD+E+K L HSEKLA+ +GL+ P +
Sbjct: 479 EDINAKIKEIYVAIKAAGFVPDLSCVLHDVDDEQKERMLLGHSEKLAITFGLMSTPSDLT 538
Query: 551 IRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
I+VMKNLR+C DCH+ K +SKV GREI LRD NRFH +G C+C DYW
Sbjct: 539 IQVMKNLRICVDCHNFAKFVSKVYGREISLRDKNRFHLITEGACTCGDYW 588
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 137/276 (49%), Gaps = 30/276 (10%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDV- 68
T +V Y G + +A + MPE+NVVSWT M+ G+ ++ R D A LF MM +
Sbjct: 74 TRLVIMYARCGALEDARNVLDGMPERNVVSWTAMISGYSQNERPDQAWELFIMMLRAGIH 133
Query: 69 --------VAQTN----MVLG------YCQDGRVDEGREIFDEMPKKNVISWTTMISGY- 109
+TN M +G Y + + E R +FD +P ++V+S+T ++SGY
Sbjct: 134 QVKQVHAFAVKTNFELHMFVGSSLLDMYAKSENIQEARRVFDMLPARDVVSYTAILSGYT 193
Query: 110 ---VNNNRIDVARKLFEVMPEKNEVSWTAML-----MGYTQCGRIQDAWELFKAMPMKSV 161
++ +D+ R L+ + N+V++TA+L + G+ L + +P +
Sbjct: 194 QLGLDEEALDLFRLLYNEGMQCNQVTFTALLNALSGLSSMDYGKQVHGLILRRELPF-FM 252
Query: 162 VASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKE 221
NS+I + G++ +R VFD M E+ +W+ M+ Y R G EV+ LF M E
Sbjct: 253 ALQNSLIDMYSKCGKLLYSRRVFDSMPERSVVSWNAMLMGYGRHGLAHEVVQLFRSMCDE 312
Query: 222 GVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQ 257
V+ + +L++VLS + +D G + +V+ Q
Sbjct: 313 -VKPDSVTLLAVLSGYSHGGLVDEGLDMFDHIVKEQ 347
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 129/251 (51%), Gaps = 30/251 (11%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPE------KNVVSWTV------------ 42
MPERNVVSWTAM+ GY + +A LF M K V ++ V
Sbjct: 96 MPERNVVSWTAMISGYSQNERPDQAWELFIMMLRAGIHQVKQVHAFAVKTNFELHMFVGS 155
Query: 43 -MLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEG----REIFDEMPKK 97
+L + + I +ARR+FDM+P +DVV+ T ++ GY Q G +E R +++E +
Sbjct: 156 SLLDMYAKSENIQEARRVFDMLPARDVVSYTAILSGYTQLGLDEEALDLFRLLYNEGMQC 215
Query: 98 NVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMG----YTQCGRIQDAWELF 153
N +++T +++ + +D +++ ++ + + A+ Y++CG++ + +F
Sbjct: 216 NQVTFTALLNALSGLSSMDYGKQVHGLILRRELPFFMALQNSLIDMYSKCGKLLYSRRVF 275
Query: 154 KAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREK---DDATWSGMIKVYERKGYELE 210
+MP +SVV+ N+M++G G++G + +F M ++ D T ++ Y G E
Sbjct: 276 DSMPERSVVSWNAMLMGYGRHGLAHEVVQLFRSMCDEVKPDSVTLLAVLSGYSHGGLVDE 335
Query: 211 VIDLFTLMQKE 221
+D+F + KE
Sbjct: 336 GLDMFDHIVKE 346
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 55/98 (56%)
Query: 227 FPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFD 286
F ++ C +L GRQVHA++V + +Y+A+ L+ MY +CG L + + D
Sbjct: 35 FHDYDDAITECVERRALREGRQVHARMVAAGYRPALYLATRLVIMYARCGALEDARNVLD 94
Query: 287 NFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGV 324
+++V W ++ISGY+Q +++ ++F M +G+
Sbjct: 95 GMPERNVVSWTAMISGYSQNERPDQAWELFIMMLRAGI 132
>gi|356521082|ref|XP_003529187.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Glycine max]
Length = 780
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 232/614 (37%), Positives = 366/614 (59%), Gaps = 18/614 (2%)
Query: 4 RNVVSWTAMVRGYVEEGMITEAGTLFWQM------PEKNVVSWTVMLGGFIRDSRIDDAR 57
+++VSWT MV Y E ++ LF QM P +S + + ++ +
Sbjct: 168 KDMVSWTGMVACYAENYCHEDSLLLFCQMRIMGYRPNNFTISAALKSCNGLEAFKVGKSV 227
Query: 58 R--LFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRI 115
+ ++D+ ++ Y + G + E ++ F+EMPK ++I W+ MIS Y +++
Sbjct: 228 HGCALKVCYDRDLYVGIALLELYTKSGEIAEAQQFFEEMPKDDLIPWSLMISRYAQSDKS 287
Query: 116 DVARKLFEVMPEK-----NEVSWTAMLMGYTQCGRIQDAWEL----FKAMPMKSVVASNS 166
A +LF M + N ++ ++L + ++ K +V SN+
Sbjct: 288 KEALELFCRMRQSSVVVPNNFTFASVLQACASLVLLNLGNQIHSCVLKVGLDSNVFVSNA 347
Query: 167 MILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVN 226
++ + GE++ + +F EK++ W+ +I Y + G + ++LF+ M ++
Sbjct: 348 LMDVYAKCGEIENSVKLFTGSTEKNEVAWNTIIVGYVQLGDGEKALNLFSNMLGLDIQPT 407
Query: 227 FPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFD 286
+ SVL ASL +L+ GRQ+H+ ++ ++ D VA+ LI MY KCG + +L FD
Sbjct: 408 EVTYSSVLRASASLVALEPGRQIHSLTIKTMYNKDSVVANSLIDMYAKCGRIDDARLTFD 467
Query: 287 NFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKE 346
+D V WN++I GY+ +GLG ++L +F M S P+ +T VGVLSACS G + +
Sbjct: 468 KMDKQDEVSWNALICGYSIHGLGMEALNLFDMMQQSNSKPNKLTFVGVLSACSNAGLLDK 527
Query: 347 GREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGAC 406
GR F+SM Y +EP EHY CMV LLGR+GQ ++A+KLI +PF+P ++W +LLGAC
Sbjct: 528 GRAHFKSMLQDYGIEPCIEHYTCMVWLLGRSGQFDEAVKLIGEIPFQPSVMVWRALLGAC 587
Query: 407 RTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPG 466
H LDL +V A+++L++EP++ ++LLSN+YA+ R+ +VA +RKNM+K+ V K PG
Sbjct: 588 VIHKNLDLGKVCAQRVLEMEPQDDATHVLLSNMYATAKRWDNVAYVRKNMKKKKVKKEPG 647
Query: 467 CSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKV 526
SW+E + VH FT D SHP +I MLE + R+AGY PD S VL DV+++EK
Sbjct: 648 LSWVENQGVVHYFTVGD-TSHPNIKLIFAMLEWLYKKTRDAGYVPDCSVVLLDVEDDEKE 706
Query: 527 HSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRF 586
L HSE+LA+A+GL+++P G IR++KNLR+C DCH+ IKL+SK++ REI++RD NRF
Sbjct: 707 RLLWMHSERLALAFGLIQIPSGCSIRIIKNLRICVDCHAVIKLVSKIVQREIVIRDINRF 766
Query: 587 HHFKDGLCSCRDYW 600
HHF+ G+CSC DYW
Sbjct: 767 HHFRQGVCSCGDYW 780
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 117/450 (26%), Positives = 207/450 (46%), Gaps = 58/450 (12%)
Query: 12 MVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIR---------------------- 49
++ YV G + +A LF +MP N VS+ + GF R
Sbjct: 44 LLNTYVHFGFLEDASKLFDEMPLTNTVSFVTLAQGFSRSHQFQRARRLLLRLFREGYEVN 103
Query: 50 -----------------DSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFD 92
D+ + ++ + + D T ++ Y G VD R++FD
Sbjct: 104 QFVFTTLLKLLVSMDLADTCLSVHAYVYKLGHQADAFVGTALIDAYSVCGNVDAARQVFD 163
Query: 93 EMPKKNVISWTTMISGYVNNNRIDVARKLFEVMP----EKNEVSWTAMLMGYTQCGRIQD 148
+ K+++SWT M++ Y N + + LF M N + +A L C ++
Sbjct: 164 GIYFKDMVSWTGMVACYAENYCHEDSLLLFCQMRIMGYRPNNFTISAAL---KSCNGLE- 219
Query: 149 AWELFKAMP--MKSVVASNSMILGLG------QNGEVQKARVVFDQMREKDDATWSGMIK 200
A+++ K++ V + +G+ ++GE+ +A+ F++M + D WS MI
Sbjct: 220 AFKVGKSVHGCALKVCYDRDLYVGIALLELYTKSGEIAEAQQFFEEMPKDDLIPWSLMIS 279
Query: 201 VYERKGYELEVIDLFTLMQKEGVRV-NFPSLISVLSVCASLASLDHGRQVHAQLVRCQFD 259
Y + E ++LF M++ V V N + SVL CASL L+ G Q+H+ +++ D
Sbjct: 280 RYAQSDKSKEALELFCRMRQSSVVVPNNFTFASVLQACASLVLLNLGNQIHSCVLKVGLD 339
Query: 260 VDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEM 319
+V+V++ L+ +Y KCGE+ +F K+ V WN+II GY Q G GEK+L +F M
Sbjct: 340 SNVFVSNALMDVYAKCGEIENSVKLFTGSTEKNEVAWNTIIVGYVQLGDGEKALNLFSNM 399
Query: 320 FSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQ 379
+ P +VT VL A + ++ GR+I S+ K + + ++D+ + G+
Sbjct: 400 LGLDIQPTEVTYSSVLRASASLVALEPGRQI-HSLTIKTMYNKDSVVANSLIDMYAKCGR 458
Query: 380 VEDAMKLIEAMPFEPDAIIWGSLLGACRTH 409
++DA + M + D + W +L+ H
Sbjct: 459 IDDARLTFDKMD-KQDEVSWNALICGYSIH 487
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 90/347 (25%), Positives = 168/347 (48%), Gaps = 13/347 (3%)
Query: 67 DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMP 126
D+ AQ ++ Y G +++ ++FDEMP N +S+ T+ G+ +++ AR+L +
Sbjct: 37 DLFAQNILLNTYVHFGFLEDASKLFDEMPLTNTVSFVTLAQGFSRSHQFQRARRLLLRLF 96
Query: 127 ----EKNEVSWTAML-----MGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEV 177
E N+ +T +L M A+ ++K ++I G V
Sbjct: 97 REGYEVNQFVFTTLLKLLVSMDLADTCLSVHAY-VYKLGHQADAFVGTALIDAYSVCGNV 155
Query: 178 QKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVC 237
AR VFD + KD +W+GM+ Y + + LF M+ G R N ++ + L C
Sbjct: 156 DAARQVFDGIYFKDMVSWTGMVACYAENYCHEDSLLLFCQMRIMGYRPNNFTISAALKSC 215
Query: 238 ASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWN 297
L + G+ VH ++ +D D+YV L+ +Y K GE+ + + F+ D++ W+
Sbjct: 216 NGLEAFKVGKSVHGCALKVCYDRDLYVGIALLELYTKSGEIAEAQQFFEEMPKDDLIPWS 275
Query: 298 SIISGYAQYGLGEKSLKVFHEMF-SSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKS 356
+IS YAQ +++L++F M SS V+P++ T VL AC+ + G +I S
Sbjct: 276 LMISRYAQSDKSKEALELFCRMRQSSVVVPNNFTFASVLQACASLVLLNLGNQI-HSCVL 334
Query: 357 KYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
K ++ ++D+ + G++E+++KL E + + W +++
Sbjct: 335 KVGLDSNVFVSNALMDVYAKCGEIENSVKLFTGST-EKNEVAWNTII 380
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 131/293 (44%), Gaps = 48/293 (16%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDM 62
+R++ A++ Y + G I EA F +MP+ +++ W++M+ + + + +A LF
Sbjct: 237 DRDLYVGIALLELYTKSGEIAEAQQFFEEMPKDDLIPWSLMISRYAQSDKSKEALELFCR 296
Query: 63 MPEKDVVAQTNM----VLGYCQD-GRVDEGREIFDEMPK----KNVISWTTMISGYVNNN 113
M + VV N VL C ++ G +I + K NV ++ Y
Sbjct: 297 MRQSSVVVPNNFTFASVLQACASLVLLNLGNQIHSCVLKVGLDSNVFVSNALMDVYAKCG 356
Query: 114 RIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELF-------------------- 153
I+ + KLF EKNEV+W +++GY Q G + A LF
Sbjct: 357 EIENSVKLFTGSTEKNEVAWNTIIVGYVQLGDGEKALNLFSNMLGLDIQPTEVTYSSVLR 416
Query: 154 -------------------KAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDAT 194
K M K V +NS+I + G + AR+ FD+M ++D+ +
Sbjct: 417 ASASLVALEPGRQIHSLTIKTMYNKDSVVANSLIDMYAKCGRIDDARLTFDKMDKQDEVS 476
Query: 195 WSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGR 247
W+ +I Y G +E ++LF +MQ+ + N + + VLS C++ LD GR
Sbjct: 477 WNALICGYSIHGLGMEALNLFDMMQQSNSKPNKLTFVGVLSACSNAGLLDKGR 529
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 70/149 (46%), Gaps = 14/149 (9%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
M ++ V +++ Y + G I +A F +M +++ VSW ++ G+ +A LF
Sbjct: 438 MYNKDSVVANSLIDMYAKCGRIDDARLTFDKMDKQDEVSWNALICGYSIHGLGMEALNLF 497
Query: 61 DMMPEKDVVAQTNM-----VLGYCQD-GRVDEGREIFDEMPKKNVIS-----WTTMISGY 109
DMM + + ++ N VL C + G +D+GR F M + I +T M+
Sbjct: 498 DMMQQSN--SKPNKLTFVGVLSACSNAGLLDKGRAHFKSMLQDYGIEPCIEHYTCMVWLL 555
Query: 110 VNNNRIDVARKLFEVMPEKNEV-SWTAML 137
+ + D A KL +P + V W A+L
Sbjct: 556 GRSGQFDEAVKLIGEIPFQPSVMVWRALL 584
>gi|359475368|ref|XP_003631669.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 891
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 235/646 (36%), Positives = 361/646 (55%), Gaps = 53/646 (8%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMP 64
NV +++ Y G A +LF MP +++ SW M+ G I++ A + D M
Sbjct: 249 NVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMR 308
Query: 65 ---------------------------------------EKDVVAQTNMVLGYCQDGRVD 85
E D+ ++ Y + G ++
Sbjct: 309 LEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLE 368
Query: 86 EGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVM------PEK-NEVSWTAMLM 138
+ R+ F +M +V+SW ++I+ Y N+ A F M P+ VS +++
Sbjct: 369 DARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVA 428
Query: 139 GYTQC--GRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWS 196
C R + + + M+ VV N+++ + G + A VF+ + KD +W+
Sbjct: 429 QSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIIPVKDVISWN 488
Query: 197 GMIKVYERKGYELEVIDLFTLMQK-EGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVR 255
+I Y + G E I+++ +M++ + + N + +S+L A + +L G ++H ++++
Sbjct: 489 TLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIK 548
Query: 256 CQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKV 315
+DV+VA+ LI +Y KCG LV +F + V WN+IIS + +G EK+LK+
Sbjct: 549 TNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKL 608
Query: 316 FHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLG 375
F EM GV PD VT V +LSACS++G V+EG+ F M+ +Y ++P +HY CMVDLLG
Sbjct: 609 FGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQ-EYGIKPSLKHYGCMVDLLG 667
Query: 376 RAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYIL 435
RAG +E A I+ MP +PDA IWG+LLGACR H ++L + A+ +L +++ KN G Y+L
Sbjct: 668 RAGYLEMAYDFIKDMPLQPDASIWGALLGACRIHGNIELGKFASDRLFEVDSKNVGYYVL 727
Query: 436 LSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMF-TGRDCVSHPEHPMIM 494
LSNIYA+ G++ V ++R R+R + K PG S IEV +KV +F TG SHP+ I
Sbjct: 728 LSNIYANVGKWEGVDKVRSLARERGLKKTPGWSTIEVNRKVDVFYTGNQ--SHPKCKEIY 785
Query: 495 RMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVM 554
L + ++ GY PD SFVL DV+E+EK H L HSE+LA+A+G++ P PIR+
Sbjct: 786 EELRVLTAKMKSLGYIPDYSFVLQDVEEDEKEHILTSHSERLAIAFGIISTPPKSPIRIF 845
Query: 555 KNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
KNLRVCGDCH+A K IS++ REI++RD+NRFHHFKDG+CSC DYW
Sbjct: 846 KNLRVCGDCHNATKFISRITQREIVVRDSNRFHHFKDGICSCGDYW 891
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 109/427 (25%), Positives = 205/427 (48%), Gaps = 22/427 (5%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM-------PEKNVVSWTVMLGGFIRDSRI 53
+P+++V +W +M+ YV G EA F+Q+ P+ + G + D R
Sbjct: 177 IPQKDVYAWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVDGRK 236
Query: 54 DDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNN 113
F + + +V +++ Y + G R +FD+MP +++ SW MISG + N
Sbjct: 237 IHCWA-FKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNG 295
Query: 114 RIDVARKLFEVMP----EKNEVSWTAMLMGYTQCGRIQDA----WELFKAMPMKSVVASN 165
A + + M + N V+ ++L Q G I A + K + SN
Sbjct: 296 NAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSN 355
Query: 166 SMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRV 225
++I + G ++ AR F QM D +W+ +I YE+ + F MQ G +
Sbjct: 356 ALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQP 415
Query: 226 NFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDV-DVYVASVLITMYIKCGELVKGKLI 284
+ +L+S+ S+ A + R VH ++R + + DV + + ++ MY K G L +
Sbjct: 416 DLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKV 475
Query: 285 FDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSG-VMPDDVTLVGVLSACSYTGK 343
F+ KD++ WN++I+GYAQ GL ++++V+ M ++P+ T V +L A ++ G
Sbjct: 476 FEIIPVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGA 535
Query: 344 VKEGREIF-ESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSL 402
+++G +I +K+ ++ C++D+ G+ G++ DAM L +P E ++ W ++
Sbjct: 536 LQQGMKIHGRVIKTNLHLDVFVA--TCLIDVYGKCGRLVDAMSLFYQVPQE-SSVTWNAI 592
Query: 403 LGACRTH 409
+ H
Sbjct: 593 ISCHGIH 599
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 110/407 (27%), Positives = 190/407 (46%), Gaps = 15/407 (3%)
Query: 66 KDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLF--- 122
+ + T +V Y G V R FD++P+K+V +W +MIS YV+N A F
Sbjct: 149 QSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVHNGHFHEAIGCFYQL 208
Query: 123 ----EVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQ 178
E+ P+ G GR W FK +V + S+I + G
Sbjct: 209 LLVSEIRPDFYTFPPVLKACGTLVDGRKIHCWA-FKLGFQWNVFVAASLIHMYSRFGFTG 267
Query: 179 KARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCA 238
AR +FD M +D +W+ MI + G + +D+ M+ EG+++NF +++S+L VC
Sbjct: 268 IARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCP 327
Query: 239 SLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNS 298
L + +H +++ + D++V++ LI MY K G L + F D+V WNS
Sbjct: 328 QLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNS 387
Query: 299 IISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFES-MKSK 357
II+ Y Q + F +M +G PD +TLV + S + + K R + M+
Sbjct: 388 IIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRG 447
Query: 358 YLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL-GACRTHMKLDLAE 416
+L+E A +VD+ + G ++ A K+ E +P + D I W +L+ G + + + E
Sbjct: 448 WLMEDVVIGNA-VVDMYAKLGLLDSAHKVFEIIPVK-DVISWNTLITGYAQNGLASEAIE 505
Query: 417 VAA--KKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNV 461
V ++ ++ P N G ++ + YA G ++ + K N+
Sbjct: 506 VYKMMEECKEIIP-NQGTWVSILPAYAHVGALQQGMKIHGRVIKTNL 551
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 124/255 (48%), Gaps = 6/255 (2%)
Query: 152 LFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEV 211
L A ++S+ S ++ G+V +R FDQ+ +KD W+ MI Y G+ E
Sbjct: 142 LVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVHNGHFHEA 201
Query: 212 IDLF-TLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLIT 270
I F L+ +R +F + VL C +L GR++H + F +V+VA+ LI
Sbjct: 202 IGCFYQLLLVSEIRPDFYTFPPVLKACGTLVD---GRKIHCWAFKLGFQWNVFVAASLIH 258
Query: 271 MYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVT 330
MY + G + +FD+ +D+ WN++ISG Q G ++L V EM G+ + VT
Sbjct: 259 MYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVT 318
Query: 331 LVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAM 390
+V +L C G + I + K+ +E ++++ + G +EDA K + M
Sbjct: 319 VVSILPVCPQLGDISTAMLIHLYV-IKHGLEFDLFVSNALINMYAKFGNLEDARKAFQQM 377
Query: 391 PFEPDAIIWGSLLGA 405
F D + W S++ A
Sbjct: 378 -FITDVVSWNSIIAA 391
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 73/158 (46%), Gaps = 6/158 (3%)
Query: 249 VHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGL 308
+HA LV +++++ L+ +Y G++ + FD KD+ WNS+IS Y G
Sbjct: 138 LHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVHNGH 197
Query: 309 GEKSLKVFHE-MFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHY 367
+++ F++ + S + PD T VL AC G + +GR+I K +
Sbjct: 198 FHEAIGCFYQLLLVSEIRPDFYTFPPVLKAC---GTLVDGRKI-HCWAFKLGFQWNVFVA 253
Query: 368 ACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
A ++ + R G A L + MPF D W +++
Sbjct: 254 ASLIHMYSRFGFTGIARSLFDDMPFR-DMGSWNAMISG 290
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/217 (20%), Positives = 101/217 (46%), Gaps = 18/217 (8%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPE-----KNVVSWTVMLGGFIRDSRIDD 55
+P ++V+SW ++ GY + G+ +EA ++ M E N +W +L + +
Sbjct: 479 IPVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQ 538
Query: 56 ARRLFDMMPEK----DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVN 111
++ + + DV T ++ Y + GR+ + +F ++P+++ ++W +IS +
Sbjct: 539 GMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGI 598
Query: 112 NNRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVAS--- 164
+ + KLF M ++ + V++ ++L + G +++ F+ M + S
Sbjct: 599 HGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQEYGIKPSLKH 658
Query: 165 -NSMILGLGQNGEVQKARVVFDQMREKDDAT-WSGMI 199
M+ LG+ G ++ A M + DA+ W ++
Sbjct: 659 YGCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGALL 695
>gi|449458783|ref|XP_004147126.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 226/643 (35%), Positives = 358/643 (55%), Gaps = 49/643 (7%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRI----------- 53
NV + T +V Y + I +A +F +MPE+++VSW ++ GF ++
Sbjct: 181 NVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQ 240
Query: 54 DDARR-----LFDMMPE-----------------------KDVVAQTNMVLGYCQDGRVD 85
D+ +R L ++P K V T + Y + G V+
Sbjct: 241 DEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVE 300
Query: 86 EGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKN-EVSWTAMLMGYTQCG 144
R IFD M +K V+SW +M+ GYV N + A +FE M E+ + + ++ C
Sbjct: 301 TARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACA 360
Query: 145 RIQD------AWELFKAMPMKSVVAS-NSMILGLGQNGEVQKARVVFDQMREKDDATWSG 197
+ D + + + S ++ NS+I + V A +F+ + + +W+
Sbjct: 361 DLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNA 420
Query: 198 MIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQ 257
MI Y + G E ++ F+ M+ G++ + +++SV+ A L+ H + +H ++R
Sbjct: 421 MILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSC 480
Query: 258 FDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFH 317
D +++V + L+ MY KCG + + +FD + + ++ WN++I GY +GLG +L +F
Sbjct: 481 LDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGRAALDLFD 540
Query: 318 EMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRA 377
+M V P+D+T + V+SACS++G V EG F+SMK Y +EP +HY MVDLLGRA
Sbjct: 541 KMKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRA 600
Query: 378 GQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLS 437
G++++A IE MP P ++G+ GAC+ H +++ E AAKKL +L P G ++LL+
Sbjct: 601 GRIKEAWDFIENMPISPGITVYGAXXGACKIHKNIEVGEKAAKKLFELNPDEGGYHVLLA 660
Query: 438 NIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRML 497
NIYAS ++ VAE+RK M K+ + K PGCS +E+ +VH F +HP+ I L
Sbjct: 661 NIYASTSKWSKVAEVRKTMEKKGLKKTPGCSVVELRNEVHSFYS-GSTTHPQSKRIYAFL 719
Query: 498 EKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNL 557
E++ ++ AGY PD++ +L DV+++ + L HSEKLA+A+GL+ G I V KNL
Sbjct: 720 EELVYEIKAAGYVPDTNLIL-DVEDDVQEQLLNSHSEKLAIAFGLLNTSPGTTIHVRKNL 778
Query: 558 RVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
RVCGDCH+A K IS V GREII+RD RFHHFK+G+CSC DYW
Sbjct: 779 RVCGDCHNATKYISLVTGREIIVRDMQRFHHFKNGICSCGDYW 821
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 109/447 (24%), Positives = 199/447 (44%), Gaps = 80/447 (17%)
Query: 41 TVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDG------------RVDE-- 86
T ++ F + I++A R+F+ + +K M+ GY ++ R D+
Sbjct: 85 TKLVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLETALAFLCRMRYDDVK 144
Query: 87 ---------------------GREIFDEMPKK----NVISWTTMISGYVNNNRIDVARKL 121
G+EI ++ NV + T +++ Y +ID A K+
Sbjct: 145 PVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKM 204
Query: 122 FEVMPEKNEVSWTAMLMGYTQCG----------RIQDAWELFKAMPMKSVV--ASNSMIL 169
F+ MPE++ VSW ++ G++Q G R+QD + ++ + +V+ A++ +L
Sbjct: 205 FDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLL 264
Query: 170 GLGQN---------------------------GEVQKARVVFDQMREKDDATWSGMIKVY 202
+G++ G V+ AR++FD M +K +W+ M+ Y
Sbjct: 265 MVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGY 324
Query: 203 ERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDV 262
+ G + I +F M +EG+ +++ L CA L L+ G+ VH + + D+
Sbjct: 325 VQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSDI 384
Query: 263 YVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSS 322
V + LI+MY KC + IF+N + V WN++I GYAQ G ++L F EM S
Sbjct: 385 SVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSL 444
Query: 323 GVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVED 382
G+ PD T+V V+ A + + + I + + ++ +VD+ + G +
Sbjct: 445 GMKPDSFTMVSVIPALAELSVTRHAKWI-HGLIIRSCLDKNIFVTTALVDMYSKCGAIHM 503
Query: 383 AMKLIEAMPFEPDAIIWGSLLGACRTH 409
A KL + M + I W +++ TH
Sbjct: 504 ARKLFD-MISDRHVITWNAMIDGYGTH 529
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 143/288 (49%), Gaps = 12/288 (4%)
Query: 71 QTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLF------EV 124
QT +V + + G ++E +F+ + K + TM+ GY N+ ++ A +V
Sbjct: 84 QTKLVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLETALAFLCRMRYDDV 143
Query: 125 MPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGL----GQNGEVQKA 180
P ++ + G ++ E+ + S A+ + G+ + ++ A
Sbjct: 144 KPVVYNFTYLLKVCG--DNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDA 201
Query: 181 RVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASL 240
+FD+M E+D +W+ +I + + G+ + ++L MQ EG R + +L++VL A +
Sbjct: 202 YKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADV 261
Query: 241 ASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSII 300
L G+ +H +R F V +++ L MY KCG + +LIFD K +V WNS++
Sbjct: 262 GLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMM 321
Query: 301 SGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGR 348
GY Q G EK++ VF +M G+ P VT++ L AC+ G ++ G+
Sbjct: 322 DGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGK 369
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 34/173 (19%), Positives = 76/173 (43%), Gaps = 5/173 (2%)
Query: 233 VLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKD 292
+L +C S+ L Q+ +++ + + L++++ K G + + +F+ K
Sbjct: 55 LLELCTSMKEL---HQIIPLVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDKL 111
Query: 293 IVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFE 352
++++++ GYA+ E +L M V P +L C +K G+EI
Sbjct: 112 DALYHTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHG 171
Query: 353 SMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
+ + +V++ + Q++DA K+ + MP E D + W +++
Sbjct: 172 QLITNSFA-ANVFAMTGVVNMYAKCRQIDDAYKMFDRMP-ERDLVSWNTIIAG 222
>gi|147812499|emb|CAN61868.1| hypothetical protein VITISV_002466 [Vitis vinifera]
Length = 440
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 197/439 (44%), Positives = 289/439 (65%), Gaps = 1/439 (0%)
Query: 162 VASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKE 221
+ +N+++ + G A VF++M +KD +W+ ++ G E + LF M+
Sbjct: 3 LVNNALVDMYAKXGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIM 62
Query: 222 GVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKG 281
G+ + + +VLS CA L L+ G+QVHA ++ + V + L++MY KCG +
Sbjct: 63 GIHPDQIVIAAVLSACAELTVLEFGKQVHANFLKSGLGSSLSVDNSLVSMYAKCGCIEDA 122
Query: 282 KLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYT 341
+FD+ +D++ W ++I GYAQ G G +SL +++M +SGV PD +T +G+L ACS+
Sbjct: 123 NKVFDSMEIQDVITWTALIVGYAQNGRGRESLNFYNBMIASGVKPDFITFIGLLFACSHA 182
Query: 342 GKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGS 401
G V+ GR F+SM+ Y ++P EHYACM+DLLGR+G++ +A +L+ M +PDA +W +
Sbjct: 183 GLVEHGRSYFQSMEEVYGIKPGPEHYACMIDLLGRSGKLMEAKELLNQMAVQPDATVWKA 242
Query: 402 LLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNV 461
LL ACR H ++L E AA L +LEPKNA PY+LLSN+Y++ G++ + A+ R+ M+ R V
Sbjct: 243 LLAACRVHGNVELGERAANNLFELEPKNAVPYVLLSNLYSAAGKWEEAAKTRRLMKLRGV 302
Query: 462 IKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVD 521
K PGCSWIE+ KVH F D SHP I +++I L++EAGY PD +F LHD+D
Sbjct: 303 SKEPGCSWIEMSSKVHRFMSED-RSHPRTAEIYSKVDEIMILIKEAGYVPDMNFALHDMD 361
Query: 522 EEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILR 581
EE K L YHSEKLAVA+GL+ +P G PIR+ KNLR+CGDCH+A+K +S V R +ILR
Sbjct: 362 EEGKELGLAYHSEKLAVAFGLLTMPPGAPIRIFKNLRICGDCHTAMKYVSGVFHRHVILR 421
Query: 582 DANRFHHFKDGLCSCRDYW 600
D+N FHHF++G CSC DYW
Sbjct: 422 DSNCFHHFREGACSCSDYW 440
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 140/296 (47%), Gaps = 27/296 (9%)
Query: 78 YCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMP----EKNEVSW 133
Y + G D ++F++M K+VISWT++++G V+N + A +LF M +++
Sbjct: 12 YAKXGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIMGIHPDQIVI 71
Query: 134 TAMLMGYTQCGRI-------QDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQ 186
A+L + C + Q K+ S+ NS++ + G ++ A VFD
Sbjct: 72 AAVL---SACAELTVLEFGKQVHANFLKSGLGSSLSVDNSLVSMYAKCGCIEDANKVFDS 128
Query: 187 MREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHG 246
M +D TW+ +I Y + G E ++ + M GV+ +F + I +L C+ ++HG
Sbjct: 129 MEIQDVITWTALIVGYAQNGRGRESLNFYNBMIASGVKPDFITFIGLLFACSHAGLVEHG 188
Query: 247 R---QVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASK-DIVMWNSIISG 302
R Q ++ + + Y + +I + + G+L++ K + + A + D +W ++++
Sbjct: 189 RSYFQSMEEVYGIKPGPEHY--ACMIDLLGRSGKLMEAKELLNQMAVQPDATVWKALLAA 246
Query: 303 YAQYG---LGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMK 355
+G LGE++ E+ +P V L + SA GK +E + MK
Sbjct: 247 CRVHGNVELGERAANNLFELEPKNAVP-YVLLSNLYSA---AGKWEEAAKTRRLMK 298
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 106/229 (46%), Gaps = 23/229 (10%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMM------ 63
A+V Y + G A +F +M +K+V+SWT ++ G + + ++A RLF M
Sbjct: 6 NALVDMYAKXGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIMGIH 65
Query: 64 PEKDVVAQTNMVLGYCQDGRVDE-GREIFDEMPKKNVISW----TTMISGYVNNNRIDVA 118
P++ V+A VL C + V E G+++ K + S +++S Y I+ A
Sbjct: 66 PDQIVIAA---VLSACAELTVLEFGKQVHANFLKSGLGSSLSVDNSLVSMYAKCGCIEDA 122
Query: 119 RKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGL----GQN 174
K+F+ M ++ ++WTA+++GY Q GR +++ + M V +GL
Sbjct: 123 NKVFDSMEIQDVITWTALIVGYAQNGRGRESLNFYNBMIASGVKPDFITFIGLLFACSHA 182
Query: 175 GEVQKARVVFDQMRE-----KDDATWSGMIKVYERKGYELEVIDLFTLM 218
G V+ R F M E ++ MI + R G +E +L M
Sbjct: 183 GLVEHGRSYFQSMEEVYGIKPGPEHYACMIDLLGRSGKLMEAKELLNQM 231
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 111/271 (40%), Gaps = 74/271 (27%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM------PEKNVVS--------WTVMLGG 46
M +++V+SWT++V G V G EA LF +M P++ V++ TV+ G
Sbjct: 28 MTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIMGIHPDQIVIAAVLSACAELTVLEFG 87
Query: 47 -------------------------FIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQD 81
+ + I+DA ++FD M +DV+ T +++GY Q+
Sbjct: 88 KQVHANFLKSGLGSSLSVDNSLVSMYAKCGCIEDANKVFDSMEIQDVITWTALIVGYAQN 147
Query: 82 GRVDEGREIFDEM----PKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAML 137
GR E +++M K + I++ ++ + ++ R F+ M
Sbjct: 148 GRGRESLNFYNBMIASGVKPDFITFIGLLFACSHAGLVEHGRSYFQSME----------- 196
Query: 138 MGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDAT-WS 196
E++ P A MI LG++G++ +A+ + +QM + DAT W
Sbjct: 197 -------------EVYGIKPGPEHYA--CMIDLLGRSGKLMEAKELLNQMAVQPDATVWK 241
Query: 197 GMIKVYERKGY----ELEVIDLFTLMQKEGV 223
++ G E +LF L K V
Sbjct: 242 ALLAACRVHGNVELGERAANNLFELEPKNAV 272
>gi|224075493|ref|XP_002304652.1| predicted protein [Populus trichocarpa]
gi|222842084|gb|EEE79631.1| predicted protein [Populus trichocarpa]
Length = 820
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 230/644 (35%), Positives = 360/644 (55%), Gaps = 79/644 (12%)
Query: 4 RNVVSWTAMVRGYVEEGMITEAGTLFWQMP----EKNVVSWTVMLGGFIRDSRIDDARRL 59
+++VSWT MV YVE E+ LF +M + N ++ +L + + + +
Sbjct: 209 KDMVSWTGMVACYVENECFEESLKLFSRMRIVGFKPNNFTFASVLKACVGLEVFNVGKAV 268
Query: 60 ----FDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRI 115
F +++ ++ Y + G VD+ ++F+EMPK +VI W+ MI+ Y + +
Sbjct: 269 HGCAFKTSYLEELFVGVELIDLYIKSGDVDDALQVFEEMPKDDVIPWSFMIARYAQSEQS 328
Query: 116 DVARKLF------EVMPEK---------------------------------NEVSWTAM 136
+ A ++F V+P + N A+
Sbjct: 329 EEAIEMFCRMRRGLVLPNQFTLASLLQACASLVDLQLGNQIHCHVVKVGLDMNVFVSNAL 388
Query: 137 LMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWS 196
+ Y +CGR++++ +LF P + V+ N++I+G Q G +KA ++F M E
Sbjct: 389 MDMYAKCGRMENSLQLFSESPNCTDVSWNTVIVGYVQAGNGEKALILFKDMLE------- 441
Query: 197 GMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRC 256
Q +G V + S VL CA +A+L+ G Q+H+ V+
Sbjct: 442 ---------------------CQVQGTEVTYSS---VLRACAGIAALEPGSQIHSLSVKT 477
Query: 257 QFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVF 316
+D + V + LI MY KCG + +L+FD D V WN++ISGY+ +GL ++LK F
Sbjct: 478 IYDKNTVVGNALIDMYAKCGNIKDARLVFDMLREHDQVSWNAMISGYSVHGLYGEALKTF 537
Query: 317 HEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGR 376
M + PD VT VG+LSACS G + G+ F+SM +Y +EP EHY CMV LLGR
Sbjct: 538 ESMLETECKPDKVTFVGILSACSNAGLLDRGQAYFKSMVEEYDIEPCAEHYTCMVWLLGR 597
Query: 377 AGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILL 436
+G ++ A KL+ +PFEP ++W +LL AC H ++L ++A+++L++EP++ ++LL
Sbjct: 598 SGHLDKAAKLVHEIPFEPSVMVWRALLSACVIHNDVELGRISAQRVLEIEPEDEATHVLL 657
Query: 437 SNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRM 496
SNIYA+ R+ +VA +R +M+++ + K PG SWIE + +VH F+ D SHP+ +I M
Sbjct: 658 SNIYANARRWGNVASIRTSMKRKGIRKEPGLSWIENQGRVHYFSVGD-TSHPDTKLINGM 716
Query: 497 LEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKN 556
LE + R GY PD S VL DV++ +K L HSE+LA+AYGL++ P P+R++KN
Sbjct: 717 LEWLNMKARNEGYVPDFSSVLLDVEDVDKEQRLWVHSERLALAYGLIRTPSISPLRIIKN 776
Query: 557 LRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
LR+C DCH+AIKLISK++ R+II+RD NRFHHF +G+CSC DYW
Sbjct: 777 LRICADCHAAIKLISKIVQRDIIIRDMNRFHHFHEGICSCGDYW 820
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 120/445 (26%), Positives = 214/445 (48%), Gaps = 20/445 (4%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMP----EKNVVSWTVMLGGFIRDS----R 52
MP+RN VS+ +++GY + +EA LF ++ E N ++ +L +
Sbjct: 105 MPDRNTVSFVTLIQGYSQCLRFSEAIGLFSRLQGEGHELNPFVFSTVLKLLVSAEWAKLG 164
Query: 53 IDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
++ + + D T ++ Y G + R++FD + K+++SWT M++ YV N
Sbjct: 165 FSVHACVYKLGFDSDAFVGTALIDCYSVCGYAECARQVFDAIEYKDMVSWTGMVACYVEN 224
Query: 113 NRIDVARKLFEVMP----EKNEVSWTAML-----MGYTQCGRIQDAWELFKAMPMKSVVA 163
+ + KLF M + N ++ ++L + G+ FK ++ +
Sbjct: 225 ECFEESLKLFSRMRIVGFKPNNFTFASVLKACVGLEVFNVGKAVHGCA-FKTSYLEELFV 283
Query: 164 SNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGV 223
+I ++G+V A VF++M + D WS MI Y + E I++F M++ V
Sbjct: 284 GVELIDLYIKSGDVDDALQVFEEMPKDDVIPWSFMIARYAQSEQSEEAIEMFCRMRRGLV 343
Query: 224 RVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKL 283
N +L S+L CASL L G Q+H +V+ D++V+V++ L+ MY KCG +
Sbjct: 344 LPNQFTLASLLQACASLVDLQLGNQIHCHVVKVGLDMNVFVSNALMDMYAKCGRMENSLQ 403
Query: 284 IFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGK 343
+F + V WN++I GY Q G GEK+L +F +M V +VT VL AC+
Sbjct: 404 LFSESPNCTDVSWNTVIVGYVQAGNGEKALILFKDMLECQVQGTEVTYSSVLRACAGIAA 463
Query: 344 VKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
++ G +I S+ K + + T ++D+ + G ++DA +L+ M E D + W +++
Sbjct: 464 LEPGSQI-HSLSVKTIYDKNTVVGNALIDMYAKCGNIKDA-RLVFDMLREHDQVSWNAMI 521
Query: 404 GACRTHMKLDLAEVAAKKLLQLEPK 428
H A + +L+ E K
Sbjct: 522 SGYSVHGLYGEALKTFESMLETECK 546
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 95/392 (24%), Positives = 183/392 (46%), Gaps = 47/392 (11%)
Query: 56 ARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKK----NVISWTTMISGYVN 111
A+R PE + +++ ++G G+ + E+ KK ++ + +++ YV
Sbjct: 32 AQRTSHSSPEFNTYIYGSLLQSCIRNGDCATGKYLHCEIIKKGNCLDLFANNILLNFYVK 91
Query: 112 NNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMP-------------- 157
+ + A KLF+ MP++N VS+ ++ GY+QC R +A LF +
Sbjct: 92 YDSLPDAAKLFDEMPDRNTVSFVTLIQGYSQCLRFSEAIGLFSRLQGEGHELNPFVFSTV 151
Query: 158 MKSVVASNSMILGLGQNGEVQK-------------------------ARVVFDQMREKDD 192
+K +V++ LG + V K AR VFD + KD
Sbjct: 152 LKLLVSAEWAKLGFSVHACVYKLGFDSDAFVGTALIDCYSVCGYAECARQVFDAIEYKDM 211
Query: 193 ATWSGMIKVY-ERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHA 251
+W+GM+ Y E + +E E + LF+ M+ G + N + SVL C L + G+ VH
Sbjct: 212 VSWTGMVACYVENECFE-ESLKLFSRMRIVGFKPNNFTFASVLKACVGLEVFNVGKAVHG 270
Query: 252 QLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEK 311
+ + +++V LI +YIK G++ +F+ D++ W+ +I+ YAQ E+
Sbjct: 271 CAFKTSYLEELFVGVELIDLYIKSGDVDDALQVFEEMPKDDVIPWSFMIARYAQSEQSEE 330
Query: 312 SLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMV 371
++++F M V+P+ TL +L AC+ ++ G +I K ++ ++
Sbjct: 331 AIEMFCRMRRGLVLPNQFTLASLLQACASLVDLQLGNQI-HCHVVKVGLDMNVFVSNALM 389
Query: 372 DLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
D+ + G++E++++L P D + W +++
Sbjct: 390 DMYAKCGRMENSLQLFSESPNCTD-VSWNTVI 420
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 138/303 (45%), Gaps = 18/303 (5%)
Query: 112 NNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDA----WELFKAMPMKSVVASNSM 167
R +A++ PE N + ++L + G E+ K + A+N +
Sbjct: 26 TQRSFLAQRTSHSSPEFNTYIYGSLLQSCIRNGDCATGKYLHCEIIKKGNCLDLFANNIL 85
Query: 168 ILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNF 227
+ + + A +FD+M +++ ++ +I+ Y + E I LF+ +Q EG +N
Sbjct: 86 LNFYVKYDSLPDAAKLFDEMPDRNTVSFVTLIQGYSQCLRFSEAIGLFSRLQGEGHELNP 145
Query: 228 PSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDN 287
+VL + S G VHA + + FD D +V + LI Y CG + +FD
Sbjct: 146 FVFSTVLKLLVSAEWAKLGFSVHACVYKLGFDSDAFVGTALIDCYSVCGYAECARQVFDA 205
Query: 288 FASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEG 347
KD+V W +++ Y + E+SLK+F M G P++ T VL AC G
Sbjct: 206 IEYKDMVSWTGMVACYVENECFEESLKLFSRMRIVGFKPNNFTFASVLKACV-------G 258
Query: 348 REIFESMKSKYLVEPKTEHY------ACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGS 401
E+F K+ + KT + ++DL ++G V+DA+++ E MP + D I W
Sbjct: 259 LEVFNVGKAVHGCAFKTSYLEELFVGVELIDLYIKSGDVDDALQVFEEMP-KDDVIPWSF 317
Query: 402 LLG 404
++
Sbjct: 318 MIA 320
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/326 (22%), Positives = 146/326 (44%), Gaps = 30/326 (9%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MP+ +V+ W+ M+ Y + EA +F +M V+ F S + L
Sbjct: 307 MPKDDVIPWSFMIARYAQSEQSEEAIEMFCRMRRG-----LVLPNQFTLASLLQACASLV 361
Query: 61 DMM-------------PEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMIS 107
D+ + +V ++ Y + GR++ ++F E P +SW T+I
Sbjct: 362 DLQLGNQIHCHVVKVGLDMNVFVSNALMDMYAKCGRMENSLQLFSESPNCTDVSWNTVIV 421
Query: 108 GYVNNNRIDVARKLFEVMPE----KNEVSWTAMLMGYTQCGRIQDAWEL----FKAMPMK 159
GYV + A LF+ M E EV+++++L ++ ++ K + K
Sbjct: 422 GYVQAGNGEKALILFKDMLECQVQGTEVTYSSVLRACAGIAALEPGSQIHSLSVKTIYDK 481
Query: 160 SVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQ 219
+ V N++I + G ++ AR+VFD +RE D +W+ MI Y G E + F M
Sbjct: 482 NTVVGNALIDMYAKCGNIKDARLVFDMLREHDQVSWNAMISGYSVHGLYGEALKTFESML 541
Query: 220 KEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVA--SVLITMYIKCGE 277
+ + + + + +LS C++ LD G+ +V ++D++ + ++ + + G
Sbjct: 542 ETECKPDKVTFVGILSACSNAGLLDRGQAYFKSMVE-EYDIEPCAEHYTCMVWLLGRSGH 600
Query: 278 LVK-GKLIFDNFASKDIVMWNSIISG 302
L K KL+ + +++W +++S
Sbjct: 601 LDKAAKLVHEIPFEPSVMVWRALLSA 626
Score = 47.0 bits (110), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 57/272 (20%), Positives = 112/272 (41%), Gaps = 48/272 (17%)
Query: 232 SVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASK 291
S+L C G+ +H ++++ +D++ ++L+ Y+K L +FD +
Sbjct: 49 SLLQSCIRNGDCATGKYLHCEIIKKGNCLDLFANNILLNFYVKYDSLPDAAKLFDEMPDR 108
Query: 292 DIVMWNSIISGYAQYGLGEKSLKVF-------HEM----FSS------------------ 322
+ V + ++I GY+Q +++ +F HE+ FS+
Sbjct: 109 NTVSFVTLIQGYSQCLRFSEAIGLFSRLQGEGHELNPFVFSTVLKLLVSAEWAKLGFSVH 168
Query: 323 ------GVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGR 376
G D ++ S G + R++F++++ K +V T AC V+
Sbjct: 169 ACVYKLGFDSDAFVGTALIDCYSVCGYAECARQVFDAIEYKDMVS-WTGMVACYVE---- 223
Query: 377 AGQVEDAMKLIEAM---PFEPDAIIWGSLLGACRTHMKLDLAEV---AAKKLLQLEPKNA 430
E+++KL M F+P+ + S+L AC ++ + A K LE
Sbjct: 224 NECFEESLKLFSRMRIVGFKPNNFTFASVLKACVGLEVFNVGKAVHGCAFKTSYLEELFV 283
Query: 431 GPYILLSNIYASQGRFHDVAELRKNMRKRNVI 462
G + L ++Y G D ++ + M K +VI
Sbjct: 284 G--VELIDLYIKSGDVDDALQVFEEMPKDDVI 313
>gi|356528966|ref|XP_003533068.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Glycine max]
Length = 712
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 225/647 (34%), Positives = 360/647 (55%), Gaps = 48/647 (7%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV----VSWTVMLGGFIR------- 49
+P+ + W M++GY +++ M N+ ++ +L GF R
Sbjct: 67 IPQPTLFIWNTMIKGYSRINHPQNGVSMYLLMLASNIKPDRFTFPFLLKGFTRNMALQYG 126
Query: 50 ------------DSR----------------IDDARRLFDMMPEKDVVAQTNMVLGYCQD 81
DS +D AR++FDM +VV M+ GY +
Sbjct: 127 KVLLNHAVKHGFDSNLFVQKAFIHMFSLCRLVDLARKVFDMGDAWEVVTWNIMLSGYNRV 186
Query: 82 GRVDEGREIFDEMPKK----NVISWTTMISGYVNNNRIDVARKLFEVMP----EKNEVSW 133
+ + + +F EM K+ N ++ M+S ++ + +++ + E+N +
Sbjct: 187 KQFKKSKMLFIEMEKRGVSPNSVTLVLMLSACSKLKDLEGGKHIYKYINGGIVERNLILE 246
Query: 134 TAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDA 193
++ + CG + +A +F M + V++ S++ G G++ AR FDQ+ E+D
Sbjct: 247 NVLIDMFAACGEMDEAQSVFDNMKNRDVISWTSIVTGFANIGQIDLARKYFDQIPERDYV 306
Query: 194 TWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQL 253
+W+ MI Y R +E + LF MQ V+ + +++S+L+ CA L +L+ G V +
Sbjct: 307 SWTAMIDGYLRMNRFIEALALFREMQMSNVKPDEFTMVSILTACAHLGALELGEWVKTYI 366
Query: 254 VRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSL 313
+ D +V + LI MY KCG + K K +F KD W ++I G A G GE++L
Sbjct: 367 DKNSIKNDTFVGNALIDMYFKCGNVGKAKKVFKEMHHKDKFTWTAMIVGLAINGHGEEAL 426
Query: 314 KVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDL 373
+F M + + PD++T +GVL AC++ G V++G+ F SM ++ ++P HY CMVDL
Sbjct: 427 AMFSNMIEASITPDEITYIGVLCACTHAGMVEKGQSFFISMTMQHGIKPNVTHYGCMVDL 486
Query: 374 LGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPY 433
LGRAG++E+A ++I MP +P++I+WGSLLGACR H + LAE+AAK++L+LEP+N Y
Sbjct: 487 LGRAGRLEEAHEVIVNMPVKPNSIVWGSLLGACRVHKNVQLAEMAAKQILELEPENGAVY 546
Query: 434 ILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMI 493
+LL NIYA+ R+ ++ ++RK M +R + K PGCS +E+ V+ F D SHP+ I
Sbjct: 547 VLLCNIYAACKRWENLRQVRKLMMERGIKKTPGCSLMELNGNVYEFVAGD-QSHPQSKEI 605
Query: 494 MRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRV 553
LE + L +AGY PD+S V D+ EE+K +L HSEKLA+AY L+ G+ IR+
Sbjct: 606 YAKLENMMQDLIKAGYSPDTSEVFLDLGEEDKETALYRHSEKLAIAYALISSGPGITIRI 665
Query: 554 MKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
+KNLR+C DCH KL+S+ RE+I+RD RFHHF+ G CSC ++W
Sbjct: 666 VKNLRMCVDCHHMAKLVSEAYNRELIVRDKTRFHHFRHGSCSCNNFW 712
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 95/381 (24%), Positives = 173/381 (45%), Gaps = 64/381 (16%)
Query: 75 VLGYC---QDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKN-- 129
V+ +C + G++ R++FD +P+ + W TMI GY N ++ +M N
Sbjct: 45 VIAFCCAHESGKMIYARQVFDAIPQPTLFIWNTMIKGYSRINHPQNGVSMYLLMLASNIK 104
Query: 130 --EVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQK-------- 179
++ +L G+T+ +Q V+ ++++ G N VQK
Sbjct: 105 PDRFTFPFLLKGFTRNMALQYG----------KVLLNHAVKHGFDSNLFVQKAFIHMFSL 154
Query: 180 ------ARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISV 233
AR VFD + TW+ M+ Y R + LF M+K GV N +L+ +
Sbjct: 155 CRLVDLARKVFDMGDAWEVVTWNIMLSGYNRVKQFKKSKMLFIEMEKRGVSPNSVTLVLM 214
Query: 234 LSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDI 293
LS C+ L L+ G+ ++ + + ++ + +VLI M+ CGE+ + + +FDN ++D+
Sbjct: 215 LSACSKLKDLEGGKHIYKYINGGIVERNLILENVLIDMFAACGEMDEAQSVFDNMKNRDV 274
Query: 294 VMWNSIISGYAQYG---LGEK----------------------------SLKVFHEMFSS 322
+ W SI++G+A G L K +L +F EM S
Sbjct: 275 ISWTSIVTGFANIGQIDLARKYFDQIPERDYVSWTAMIDGYLRMNRFIEALALFREMQMS 334
Query: 323 GVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVED 382
V PD+ T+V +L+AC++ G ++ G E ++ K ++ T ++D+ + G V
Sbjct: 335 NVKPDEFTMVSILTACAHLGALELG-EWVKTYIDKNSIKNDTFVGNALIDMYFKCGNVGK 393
Query: 383 AMKLIEAMPFEPDAIIWGSLL 403
A K+ + M D W +++
Sbjct: 394 AKKVFKEM-HHKDKFTWTAMI 413
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 143/295 (48%), Gaps = 12/295 (4%)
Query: 173 QNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGV---RVNFPS 229
++G++ AR VFD + + W+ MIK Y R + + ++ LM + R FP
Sbjct: 53 ESGKMIYARQVFDAIPQPTLFIWNTMIKGYSRINHPQNGVSMYLLMLASNIKPDRFTFPF 112
Query: 230 LISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFA 289
L+ + +L +G+ + V+ FD +++V I M+ C + + +FD
Sbjct: 113 LLKGFT---RNMALQYGKVLLNHAVKHGFDSNLFVQKAFIHMFSLCRLVDLARKVFDMGD 169
Query: 290 SKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGRE 349
+ ++V WN ++SGY + +KS +F EM GV P+ VTLV +LSACS ++ G+
Sbjct: 170 AWEVVTWNIMLSGYNRVKQFKKSKMLFIEMEKRGVSPNSVTLVLMLSACSKLKDLEGGKH 229
Query: 350 IFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTH 409
I++ + +VE ++D+ G++++A + + M D I W S++
Sbjct: 230 IYKYINGG-IVERNLILENVLIDMFAACGEMDEAQSVFDNMK-NRDVISWTSIVTGFANI 287
Query: 410 MKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKP 464
++DLA K Q+ ++ + + + Y RF + L + M+ NV KP
Sbjct: 288 GQIDLAR---KYFDQIPERDYVSWTAMIDGYLRMNRFIEALALFREMQMSNV-KP 338
>gi|356515320|ref|XP_003526349.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 816
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 228/616 (37%), Positives = 338/616 (54%), Gaps = 18/616 (2%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRL- 59
MP+R++VSW +V GY + G A + QM E ++ L + A R+
Sbjct: 203 MPQRDLVSWNTVVAGYAQNGFARRAVQVVLQMQEAGQKPDSITLVSVLPAVADLKALRIG 262
Query: 60 -------FDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
F E V T M+ Y + G V R +F M +NV+SW TMI GY N
Sbjct: 263 RSIHGYAFRAGFEYMVNVATAMLDTYFKCGSVRSARLVFKGMSSRNVVSWNTMIDGYAQN 322
Query: 113 NRIDVARKLFEVM----PEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMK----SVVAS 164
+ A F M E VS L G ++ + + + K V
Sbjct: 323 GESEEAFATFLKMLDEGVEPTNVSMMGALHACANLGDLERGRYVHRLLDEKKIGFDVSVM 382
Query: 165 NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVR 224
NS+I + V A VF ++ K TW+ MI Y + G E ++LF MQ ++
Sbjct: 383 NSLISMYSKCKRVDIAASVFGNLKHKTVVTWNAMILGYAQNGCVNEALNLFCEMQSHDIK 442
Query: 225 VNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLI 284
+ +L+SV++ A L+ + +H +R D +V+V + LI + KCG + + +
Sbjct: 443 PDSFTLVSVITALADLSVTRQAKWIHGLAIRTLMDKNVFVCTALIDTHAKCGAIQTARKL 502
Query: 285 FDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKV 344
FD + ++ WN++I GY G G ++L +F+EM + V P+++T + V++ACS++G V
Sbjct: 503 FDLMQERHVITWNAMIDGYGTNGHGREALDLFNEMQNGSVKPNEITFLSVIAACSHSGLV 562
Query: 345 KEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLG 404
+EG FESMK Y +EP +HY MVDLLGRAG+++DA K I+ MP +P + G++LG
Sbjct: 563 EEGMYYFESMKENYGLEPTMDHYGAMVDLLGRAGRLDDAWKFIQDMPVKPGITVLGAMLG 622
Query: 405 ACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKP 464
ACR H ++L E A +L L+P + G ++LL+N+YAS + VA +R M K+ + K
Sbjct: 623 ACRIHKNVELGEKTADELFDLDPDDGGYHVLLANMYASASMWDKVARVRTAMEKKGIQKT 682
Query: 465 PGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEE 524
PGCS +E+ +VH F +HP+ I LE +G ++ AGY PD++ + HDV+E+
Sbjct: 683 PGCSLVELRNEVHTFYS-GSTNHPQSKRIYAYLETLGDEMKAAGYVPDTNSI-HDVEEDV 740
Query: 525 KVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDAN 584
K L HSE+LA+A+GL+ G I + KNLRVCGDCH A K IS V GREII+RD
Sbjct: 741 KEQLLSSHSERLAIAFGLLNTRHGTAIHIRKNLRVCGDCHEATKYISLVTGREIIVRDLR 800
Query: 585 RFHHFKDGLCSCRDYW 600
RFHHFK+G+CSC DYW
Sbjct: 801 RFHHFKNGICSCGDYW 816
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 109/398 (27%), Positives = 188/398 (47%), Gaps = 47/398 (11%)
Query: 14 RGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTN 73
RG GM+ G + N+ + T ++ + + +I+DA ++F+ MP++D+V+
Sbjct: 160 RGREIHGMVITNGF------QSNLFAMTAVVNLYAKCRQIEDAYKMFERMPQRDLVSWNT 213
Query: 74 MVLGYCQDGRVDEGREIFDEM----PKKNVISWTTMISGYVNNNRIDVARKL----FEVM 125
+V GY Q+G ++ +M K + I+ +++ + + + R + F
Sbjct: 214 VVAGYAQNGFARRAVQVVLQMQEAGQKPDSITLVSVLPAVADLKALRIGRSIHGYAFRAG 273
Query: 126 PEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFD 185
E TAML Y +CG ++ A +FK M ++VV+ N+MI G QNGE ++A F
Sbjct: 274 FEYMVNVATAMLDTYFKCGSVRSARLVFKGMSSRNVVSWNTMIDGYAQNGESEEAFATF- 332
Query: 186 QMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDH 245
L+++D EGV S++ L CA+L L+
Sbjct: 333 -----------------------LKMLD-------EGVEPTNVSMMGALHACANLGDLER 362
Query: 246 GRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQ 305
GR VH L + DV V + LI+MY KC + +F N K +V WN++I GYAQ
Sbjct: 363 GRYVHRLLDEKKIGFDVSVMNSLISMYSKCKRVDIAASVFGNLKHKTVVTWNAMILGYAQ 422
Query: 306 YGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTE 365
G ++L +F EM S + PD TLV V++A + ++ + I + + L++
Sbjct: 423 NGCVNEALNLFCEMQSHDIKPDSFTLVSVITALADLSVTRQAKWI-HGLAIRTLMDKNVF 481
Query: 366 HYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
++D + G ++ A KL + M E I W +++
Sbjct: 482 VCTALIDTHAKCGAIQTARKLFDLMQ-ERHVITWNAMI 518
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 153/295 (51%), Gaps = 8/295 (2%)
Query: 71 QTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFE------V 124
QT ++ +C+ + E +F+ + K + + TM+ GY N+ + A + +E V
Sbjct: 79 QTKLISLFCKFNSITEAARVFEPVEHKLDVLYHTMLKGYAKNSTLRDAVRFYERMRCDEV 138
Query: 125 MPEKNEVSWTAMLMGYT-QCGRIQDAWELFKAMPMKSVVASNSMILGL-GQNGEVQKARV 182
MP + ++ L G R ++ + +S + + + ++ L + +++ A
Sbjct: 139 MPVVYDFTYLLQLSGENLDLRRGREIHGMVITNGFQSNLFAMTAVVNLYAKCRQIEDAYK 198
Query: 183 VFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLAS 242
+F++M ++D +W+ ++ Y + G+ + + MQ+ G + + +L+SVL A L +
Sbjct: 199 MFERMPQRDLVSWNTVVAGYAQNGFARRAVQVVLQMQEAGQKPDSITLVSVLPAVADLKA 258
Query: 243 LDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISG 302
L GR +H R F+ V VA+ ++ Y KCG + +L+F +S+++V WN++I G
Sbjct: 259 LRIGRSIHGYAFRAGFEYMVNVATAMLDTYFKCGSVRSARLVFKGMSSRNVVSWNTMIDG 318
Query: 303 YAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSK 357
YAQ G E++ F +M GV P +V+++G L AC+ G ++ GR + + K
Sbjct: 319 YAQNGESEEAFATFLKMLDEGVEPTNVSMMGALHACANLGDLERGRYVHRLLDEK 373
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 92/205 (44%), Gaps = 9/205 (4%)
Query: 228 PSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDN 287
PS I +L +C SL L Q+ +++ F + + LI+++ K + + +F+
Sbjct: 46 PSAI-LLELCTSLKEL---HQILPLIIKNGFYNEHLFQTKLISLFCKFNSITEAARVFEP 101
Query: 288 FASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEG 347
K V++++++ GYA+ +++ + M VMP +L ++ G
Sbjct: 102 VEHKLDVLYHTMLKGYAKNSTLRDAVRFYERMRCDEVMPVVYDFTYLLQLSGENLDLRRG 161
Query: 348 REIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACR 407
REI M + +V+L + Q+EDA K+ E MP + D + W +++
Sbjct: 162 REI-HGMVITNGFQSNLFAMTAVVNLYAKCRQIEDAYKMFERMP-QRDLVSWNTVVAG-- 217
Query: 408 THMKLDLAEVAAKKLLQLEPKNAGP 432
+ + A A + +LQ++ P
Sbjct: 218 -YAQNGFARRAVQVVLQMQEAGQKP 241
>gi|125595802|gb|EAZ35582.1| hypothetical protein OsJ_19868 [Oryza sativa Japonica Group]
Length = 734
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 228/617 (36%), Positives = 348/617 (56%), Gaps = 19/617 (3%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEK--------NVVSWTVMLGGFIRDSR 52
MP R+ V+W A+V GY G+ A + +M E+ +VS +
Sbjct: 120 MPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVSVLPACANARALAA 179
Query: 53 IDDARRLFDMMPEKDVVAQTNMVL-GYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVN 111
+A +++V +L YC+ G + R +FD MP KN +SW MI GY
Sbjct: 180 CREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQ 239
Query: 112 NNRIDVARKLFEVMPEKN-EVSWTAMLMGYTQCGRI------QDAWELFKAMPMKSVVAS 164
N A LF M E+ +V+ ++L CG + EL + + S V+
Sbjct: 240 NGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSV 299
Query: 165 -NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGV 223
N++I + V A VFD++ + +W+ MI + G + + LFT MQ E V
Sbjct: 300 MNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENV 359
Query: 224 RVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKL 283
+ + +L+SV+ A ++ R +H +R D DVYV + LI MY KCG + ++
Sbjct: 360 KPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARI 419
Query: 284 IFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGK 343
+F++ + ++ WN++I GY +G G+ ++++F EM S G++P++ T + VLSACS+ G
Sbjct: 420 LFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAGL 479
Query: 344 VKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
V EGRE F SMK Y +EP EHY MVDLLGRAG++++A I+ MP +P ++G++L
Sbjct: 480 VDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAWAFIQKMPMDPGLSVYGAML 539
Query: 404 GACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIK 463
GAC+ H ++LAE +A+K+ +L P+ ++LL+NIYA+ + DVA +R M K + K
Sbjct: 540 GACKLHKNVELAEESAQKIFELGPQEGVYHVLLANIYANASMWKDVARVRTAMEKNGLQK 599
Query: 464 PPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEE 523
PG S I+++ ++H F +H + I L K+ ++ GY PD+ + HDV+++
Sbjct: 600 TPGWSIIQLKNEIHTFYS-GSTNHQQAKEIYSRLAKLIEEIKAVGYVPDTDSI-HDVEDD 657
Query: 524 EKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDA 583
K L HSEKLA+A+GL++ G I++ KNLRVC DCH+A KLIS V GREII+RD
Sbjct: 658 VKAQLLNTHSEKLAIAFGLIRTAPGTTIQIKKNLRVCNDCHNATKLISLVTGREIIMRDI 717
Query: 584 NRFHHFKDGLCSCRDYW 600
RFHHFKDG CSC DYW
Sbjct: 718 QRFHHFKDGKCSCGDYW 734
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 99/385 (25%), Positives = 160/385 (41%), Gaps = 73/385 (18%)
Query: 65 EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARK---- 120
+ + +A T + Y + R + R +FD MP ++ ++W +++GY N +A +
Sbjct: 91 DSEALAATALANMYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVR 150
Query: 121 -------------LFEVMPEKNEVSW-----------------------TAMLMGYTQCG 144
L V+P TA+L Y +CG
Sbjct: 151 MQEEEGERPDSITLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCG 210
Query: 145 RIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYER 204
I+ A +F MP K+ V+ N+MI G QNG+ ++A +F++M E
Sbjct: 211 DIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVE--------------- 255
Query: 205 KGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYV 264
EGV V S+++ L C L LD G +VH LVR D +V V
Sbjct: 256 ----------------EGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSV 299
Query: 265 ASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGV 324
+ LITMY KC + +FD + V WN++I G AQ G E ++++F M V
Sbjct: 300 MNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENV 359
Query: 325 MPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAM 384
PD TLV V+ A + + R I + ++ ++D+ + G+V A
Sbjct: 360 KPDSFTLVSVIPALADISDPLQARWI-HGYSIRLHLDQDVYVLTALIDMYAKCGRVNIAR 418
Query: 385 KLIEAMPFEPDAIIWGSLLGACRTH 409
L + E I W +++ +H
Sbjct: 419 ILFNS-ARERHVITWNAMIHGYGSH 442
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 61/122 (50%), Gaps = 1/122 (0%)
Query: 215 FTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIK 274
F M G + S+L +CA+ L GR VHAQL D + A+ L MY K
Sbjct: 47 FVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALANMYAK 106
Query: 275 CGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMF-SSGVMPDDVTLVG 333
C + +FD +D V WN++++GYA+ GL ++++ M G PD +TLV
Sbjct: 107 CRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVS 166
Query: 334 VL 335
VL
Sbjct: 167 VL 168
>gi|115476932|ref|NP_001062062.1| Os08g0481000 [Oryza sativa Japonica Group]
gi|42409025|dbj|BAD10278.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113624031|dbj|BAF23976.1| Os08g0481000 [Oryza sativa Japonica Group]
gi|215715342|dbj|BAG95093.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222640747|gb|EEE68879.1| hypothetical protein OsJ_27695 [Oryza sativa Japonica Group]
Length = 563
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 203/501 (40%), Positives = 319/501 (63%), Gaps = 2/501 (0%)
Query: 1 MPERNVVSWTAMVRGYVEEGM-ITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRL 59
MP R+ VSW A++ G + A +LF MP +NV+SW ++ G + + A
Sbjct: 42 MPRRDAVSWNALLTALWRAGRDLPAARSLFDDMPSRNVISWNSIIAGCLAHGDLAAASAY 101
Query: 60 FDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVAR 119
F P ++V + M+ G + G +++ R +FD+MP++NV+S+TTM+ G + AR
Sbjct: 102 FARAPRRNVASWNAMLAGLVRLGSMEDARSLFDQMPERNVVSYTTMVDGLARCGEVASAR 161
Query: 120 KLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQK 179
+LF+ MP +N VSW AM+ GY +++A +LF+AMP K+VVA +MI G + G++Q
Sbjct: 162 ELFDAMPTRNLVSWAAMISGYVDNNMLEEARKLFEAMPEKNVVACTAMITGYCKEGDLQN 221
Query: 180 ARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCAS 239
AR +FD +R KD +W+ +I Y G E L+ +M +EG++ + +LI++L+ C+S
Sbjct: 222 ARRLFDGIRAKDVISWNAIISGYVHNGLGEEATKLYIIMLREGIKPDQATLIALLTACSS 281
Query: 240 LASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSI 299
LA L GR HA +++ + + + + L+TMY KCG + + +L+F + S+DIV WN+I
Sbjct: 282 LALLRQGRSTHAVVIKAMLESSISICNALMTMYSKCGNVDESELVFMSLKSQDIVSWNTI 341
Query: 300 ISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYL 359
I+ YAQ+G +K + +FHEM G++P+D+T + +LSAC + G+V E ++F+ M SKY
Sbjct: 342 IAAYAQHGRYQKVIALFHEMELCGLIPNDITFLSMLSACGHAGRVDESLKLFDLMFSKYA 401
Query: 360 VEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAA 419
+ P+ EHYAC+VD+L RAGQ+E A I+ MP E + +WG+LL A +TH + L E+AA
Sbjct: 402 ISPRAEHYACIVDILSRAGQLEKACSYIKEMPSEAEKNVWGTLLCASQTHGNVQLGELAA 461
Query: 420 KKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMF 479
K L+ + +++G Y++LSNIYA+ G + +V +R M+++ V K PG SW E+ KVHMF
Sbjct: 462 KMLVLSDFESSGAYVMLSNIYAAAGMWGEVNRVRSQMKEKGVKKQPGHSWTEIADKVHMF 521
Query: 480 TGRDCVSHPEHPMIMRMLEKI 500
G D SHPE MI+ L KI
Sbjct: 522 VGGD-ASHPEMDMILSELRKI 541
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 93/343 (27%), Positives = 174/343 (50%), Gaps = 11/343 (3%)
Query: 68 VVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNR-IDVARKLFEVMP 126
+V + + G V R +FD MP+++ +SW +++ R + AR LF+ MP
Sbjct: 16 LVRDNQRITALARAGDVAAARRVFDAMPRRDAVSWNALLTALWRAGRDLPAARSLFDDMP 75
Query: 127 EKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQ 186
+N +SW +++ G G + A F P ++V + N+M+ GL + G ++ AR +FDQ
Sbjct: 76 SRNVISWNSIIAGCLAHGDLAAASAYFARAPRRNVASWNAMLAGLVRLGSMEDARSLFDQ 135
Query: 187 MREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHG 246
M E++ +++ M+ R G +LF M N S +++S L+
Sbjct: 136 MPERNVVSYTTMVDGLARCGEVASARELFDAMPTR----NLVSWAAMISGYVDNNMLEEA 191
Query: 247 RQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQY 306
R +L + +V + +IT Y K G+L + +FD +KD++ WN+IISGY
Sbjct: 192 R----KLFEAMPEKNVVACTAMITGYCKEGDLQNARRLFDGIRAKDVISWNAIISGYVHN 247
Query: 307 GLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEH 366
GLGE++ K++ M G+ PD TL+ +L+ACS +++GR ++ K ++E
Sbjct: 248 GLGEEATKLYIIMLREGIKPDQATLIALLTACSSLALLRQGRST-HAVVIKAMLESSISI 306
Query: 367 YACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTH 409
++ + + G V+++ + ++ + D + W +++ A H
Sbjct: 307 CNALMTMYSKCGNVDESELVFMSLKSQ-DIVSWNTIIAAYAQH 348
>gi|297743497|emb|CBI36364.3| unnamed protein product [Vitis vinifera]
Length = 832
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 223/627 (35%), Positives = 351/627 (55%), Gaps = 80/627 (12%)
Query: 28 LFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNM-----VLGYCQDG 82
+F +M E+N V+W ++ + +DA LF M E + Q + +L C +
Sbjct: 232 VFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQESEDGIQPDQFTFTTLLTLCANQ 291
Query: 83 RVD-EGREIFDEMPK----KNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAML 137
R D +GR+I + + KN+I T ++ Y R++ A+++F M E+N SW +M+
Sbjct: 292 RNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMI 351
Query: 138 MGYTQCGRIQDAWELFKAMPMKSV----VASNSMILGLGQNGEVQKAR------------ 181
GY Q G Q+A LFK M + + + +SM+ + QK R
Sbjct: 352 EGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTME 411
Query: 182 -----------------------VVFDQMREKD--DATWSGMIKVYERKGYELEVIDLFT 216
V+DQ +KD A W+ ++ Y KG + E + F
Sbjct: 412 EEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDRNTALWNSILAGYANKGLKKESFNHFL 471
Query: 217 LMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCG 276
M + + + ++++++++ + + + L+ MY KCG
Sbjct: 472 EMLESDIEYDVLTMVTIVNL-------------------------LVLETALVDMYSKCG 506
Query: 277 ELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLS 336
+ K + +FDN K+IV WN++ISGY+++G +++L ++ EM G+ P++VT + +LS
Sbjct: 507 AITKARTVFDNMNGKNIVSWNAMISGYSKHGCSKEALILYEEMPKKGMYPNEVTFLAILS 566
Query: 337 ACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDA 396
ACS+TG V+EG IF SM+ Y +E K EHY CMVDLLGRAG++EDA + +E MP EP+
Sbjct: 567 ACSHTGLVEEGLRIFTSMQEDYNIEAKAEHYTCMVDLLGRAGRLEDAKEFVEKMPIEPEV 626
Query: 397 IIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNM 456
WG+LLGACR H +D+ +AA++L +L+P+N GPY+++SNIYA+ GR+ +V ++R+ M
Sbjct: 627 STWGALLGACRVHKDMDMGRLAAQRLFELDPQNPGPYVIMSNIYAAAGRWKEVEDIRQMM 686
Query: 457 RKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFV 516
+ + V K PG SWIE+ ++ +F +HP+ I L + + GY PD+SF+
Sbjct: 687 KMKGVKKDPGVSWIEINSEIQIFHA-GSKTHPKTEEIYNNLRHLTLQSKGLGYIPDTSFI 745
Query: 517 LHDVDEEEKVHSLRY---HSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKV 573
L +V + ++ Y HSE+LA++ GL+ LP+ IRV KNLR+CGDCH+A K ISK+
Sbjct: 746 LQNVKDIKEEEEEEYLLQHSERLALSLGLISLPKKSTIRVFKNLRICGDCHTATKFISKI 805
Query: 574 MGREIILRDANRFHHFKDGLCSCRDYW 600
GR II RD NRFHHF++G CSC DYW
Sbjct: 806 TGRRIIARDTNRFHHFENGKCSCGDYW 832
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 87/330 (26%), Positives = 161/330 (48%), Gaps = 43/330 (13%)
Query: 118 ARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASN------------ 165
ARKLFE MPE+N +W M++ Y + +AW +F M V N
Sbjct: 128 ARKLFEEMPERNLTAWNTMILAYARVDDYMEAWGIFDRMLKIGVCPDNFTFASALRVCGA 187
Query: 166 -----------SMILGLGQNGEV----------------QKARVVFDQMREKDDATWSGM 198
S ++ G G+ + VFD+M E++ TW+ +
Sbjct: 188 LRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSI 247
Query: 199 IKVYERKGYELEVIDLFTLMQ--KEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRC 256
I + G+ + + LF MQ ++G++ + + ++L++CA+ + + GRQ+HA L+R
Sbjct: 248 ISAEAQFGHFNDALVLFLRMQESEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRA 307
Query: 257 QFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVF 316
++ V + L+ MY +CG L K IF+ A ++ WNS+I GY Q G +++L++F
Sbjct: 308 NITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLF 367
Query: 317 HEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGR 376
+M +G+ PD +L +LS+C ++GRE+ + + +E + +VD+ +
Sbjct: 368 KQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGREL-HNFIVRNTMEEEGILQVVLVDMYAK 426
Query: 377 AGQVEDAMKLI-EAMPFEPDAIIWGSLLGA 405
G ++ A K+ + + + + +W S+L
Sbjct: 427 CGSMDYAWKVYDQTIKKDRNTALWNSILAG 456
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/193 (20%), Positives = 86/193 (44%), Gaps = 5/193 (2%)
Query: 216 TLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKC 275
++ K VN S++ C S G+ +H Q++ ++ D Y+ + ++ +Y +
Sbjct: 60 SIHTKPASDVNPLPYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARS 119
Query: 276 G---ELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLV 332
G +L + +F+ +++ WN++I YA+ ++ +F M GV PD+ T
Sbjct: 120 GCLDDLCYARKLFEEMPERNLTAWNTMILAYARVDDYMEAWGIFDRMLKIGVCPDNFTFA 179
Query: 333 GVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPF 392
L C G+++ + + + T ++D+ + E +K+ + M
Sbjct: 180 SALRVCGALRSRDGGKQVHSKLIACGF-KGDTFVGNALIDMYAKCDDEESCLKVFDEMG- 237
Query: 393 EPDAIIWGSLLGA 405
E + + W S++ A
Sbjct: 238 ERNQVTWNSIISA 250
>gi|147795292|emb|CAN64990.1| hypothetical protein VITISV_001772 [Vitis vinifera]
Length = 891
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 235/646 (36%), Positives = 361/646 (55%), Gaps = 53/646 (8%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMP 64
NV +++ Y G A +LF MP +++ SW M+ G I++ A + D M
Sbjct: 249 NVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMR 308
Query: 65 ---------------------------------------EKDVVAQTNMVLGYCQDGRVD 85
E D+ ++ Y + G ++
Sbjct: 309 LEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLE 368
Query: 86 EGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVM------PEK-NEVSWTAMLM 138
+ R+ F +M +V+SW ++I+ Y N+ A F M P+ VS +++
Sbjct: 369 DARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVA 428
Query: 139 GYTQC--GRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWS 196
C R + + + M+ VV N+++ + G + A VF+ + KD +W+
Sbjct: 429 QSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIILVKDVISWN 488
Query: 197 GMIKVYERKGYELEVIDLFTLMQK-EGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVR 255
+I Y + G E I+++ +M++ + + N + +S+L A + +L G ++H ++++
Sbjct: 489 TLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMRIHGRVIK 548
Query: 256 CQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKV 315
+DV+VA+ LI +Y KCG LV +F + V WN+IIS + +G EK+LK+
Sbjct: 549 TNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKL 608
Query: 316 FHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLG 375
F EM GV PD VT V +LSACS++G V+EG+ F M+ +Y ++P +HY CMVDLLG
Sbjct: 609 FGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQ-EYGIKPSLKHYGCMVDLLG 667
Query: 376 RAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYIL 435
RAG +E A I+ MP +PDA IWG+LLGACR H ++L + A+ +L +++ KN G Y+L
Sbjct: 668 RAGYLEMAYGFIKDMPLQPDASIWGALLGACRIHGNIELGKFASDRLFEVDSKNVGYYVL 727
Query: 436 LSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMF-TGRDCVSHPEHPMIM 494
LSNIYA+ G++ V ++R R+R + K PG S IEV +KV +F TG SHP+ I
Sbjct: 728 LSNIYANVGKWEGVDKVRSLARERGLKKTPGWSTIEVNRKVDVFYTGNQ--SHPKCKEIY 785
Query: 495 RMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVM 554
L + ++ GY PD SFVL DV+E+EK H L HSE+LA+A+G++ P PIR+
Sbjct: 786 EELRVLTAKMKSLGYIPDYSFVLQDVEEDEKEHILTSHSERLAIAFGIISTPPKSPIRIF 845
Query: 555 KNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
KNLRVCGDCH+A K IS++ REI++RD+NRFHHFKDG+CSC DYW
Sbjct: 846 KNLRVCGDCHNATKFISRITQREIVVRDSNRFHHFKDGICSCGDYW 891
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 110/431 (25%), Positives = 206/431 (47%), Gaps = 30/431 (6%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM-------PEKNVVSWTVMLGGFIRDSRI 53
+P+++V +W +M+ YV G EA F+Q+ P+ + G +
Sbjct: 177 IPQKDVYTWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACG-----TL 231
Query: 54 DDARRL----FDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGY 109
D RR+ F + + +V +++ Y + G R +FD+MP +++ SW MISG
Sbjct: 232 VDGRRIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGL 291
Query: 110 VNNNRIDVARKLFEVMP----EKNEVSWTAMLMGYTQCGRIQDA----WELFKAMPMKSV 161
+ N A + + M + N V+ ++L Q G I A + K +
Sbjct: 292 IQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDL 351
Query: 162 VASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKE 221
SN++I + G ++ AR F QM D +W+ +I YE+ + F MQ
Sbjct: 352 FVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLN 411
Query: 222 GVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDV-DVYVASVLITMYIKCGELVK 280
G + + +L+S+ S+ A + R VH ++R + + DV + + ++ MY K G L
Sbjct: 412 GFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDS 471
Query: 281 GKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSG-VMPDDVTLVGVLSACS 339
+F+ KD++ WN++I+GYAQ GL ++++V+ M ++P+ T V +L A +
Sbjct: 472 AHKVFEIILVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYA 531
Query: 340 YTGKVKEGREIF-ESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAII 398
+ G +++G I +K+ ++ C++D+ G+ G++ DAM L +P E ++
Sbjct: 532 HVGALQQGMRIHGRVIKTNLHLDVFVA--TCLIDVYGKCGRLVDAMSLFYQVPQE-SSVT 588
Query: 399 WGSLLGACRTH 409
W +++ H
Sbjct: 589 WNAIISCHGIH 599
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 109/407 (26%), Positives = 188/407 (46%), Gaps = 15/407 (3%)
Query: 66 KDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLF--- 122
+ + T +V Y G V R FD++P+K+V +W +MIS YV+N A F
Sbjct: 149 QSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYTWNSMISAYVHNGHFHEAIGCFYQL 208
Query: 123 ----EVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQ 178
E+ P+ G GR W FK +V + S+I + G
Sbjct: 209 LLVSEIRPDFYTFPPVLKACGTLVDGRRIHCWA-FKLGFQWNVFVAASLIHMYSRFGFTG 267
Query: 179 KARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCA 238
AR +FD M +D +W+ MI + G + +D+ M+ EG+++NF +++S+L VC
Sbjct: 268 IARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCP 327
Query: 239 SLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNS 298
L + +H +++ + D++V++ LI MY K G L + F D+V WNS
Sbjct: 328 QLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNS 387
Query: 299 IISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFES-MKSK 357
II+ Y Q + F +M +G PD +TLV + S + + K R + M+
Sbjct: 388 IIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRG 447
Query: 358 YLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL-GACRTHMKLDLAE 416
+L+E A +VD+ + G ++ A K+ E + + D I W +L+ G + + + E
Sbjct: 448 WLMEDVVIGNA-VVDMYAKLGLLDSAHKVFEIILVK-DVISWNTLITGYAQNGLASEAIE 505
Query: 417 VAA--KKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNV 461
V ++ ++ P N G ++ + YA G + + K N+
Sbjct: 506 VYKMMEECKEIIP-NQGTWVSILPAYAHVGALQQGMRIHGRVIKTNL 551
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 125/255 (49%), Gaps = 6/255 (2%)
Query: 152 LFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEV 211
L A ++S+ S ++ G+V +R FDQ+ +KD TW+ MI Y G+ E
Sbjct: 142 LVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYTWNSMISAYVHNGHFHEA 201
Query: 212 IDLF-TLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLIT 270
I F L+ +R +F + VL C +L GR++H + F +V+VA+ LI
Sbjct: 202 IGCFYQLLLVSEIRPDFYTFPPVLKACGTLVD---GRRIHCWAFKLGFQWNVFVAASLIH 258
Query: 271 MYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVT 330
MY + G + +FD+ +D+ WN++ISG Q G ++L V EM G+ + VT
Sbjct: 259 MYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVT 318
Query: 331 LVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAM 390
+V +L C G + I + K+ +E ++++ + G +EDA K + M
Sbjct: 319 VVSILPVCPQLGDISTAMLIHLYV-IKHGLEFDLFVSNALINMYAKFGNLEDARKAFQQM 377
Query: 391 PFEPDAIIWGSLLGA 405
F D + W S++ A
Sbjct: 378 -FITDVVSWNSIIAA 391
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 72/158 (45%), Gaps = 6/158 (3%)
Query: 249 VHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGL 308
+HA LV +++++ L+ +Y G++ + FD KD+ WNS+IS Y G
Sbjct: 138 LHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYTWNSMISAYVHNGH 197
Query: 309 GEKSLKVFHE-MFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHY 367
+++ F++ + S + PD T VL AC G + +GR I K +
Sbjct: 198 FHEAIGCFYQLLLVSEIRPDFYTFPPVLKAC---GTLVDGRRI-HCWAFKLGFQWNVFVA 253
Query: 368 ACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
A ++ + R G A L + MPF D W +++
Sbjct: 254 ASLIHMYSRFGFTGIARSLFDDMPFR-DMGSWNAMISG 290
>gi|224073070|ref|XP_002303960.1| predicted protein [Populus trichocarpa]
gi|222841392|gb|EEE78939.1| predicted protein [Populus trichocarpa]
Length = 704
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 229/618 (37%), Positives = 346/618 (55%), Gaps = 22/618 (3%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MPER++V W M+ GY + G A L +M E+ ++ + + + D R L
Sbjct: 91 MPERDLVCWNTMISGYAQNGFAKVALMLVLRMSEEGHRPDSITIVSIL--PAVADTRLLR 148
Query: 61 DMMP----------EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYV 110
M E V T +V Y + G V R IFD M + V+SW +MI GYV
Sbjct: 149 IGMAVHGYVLRAGFESLVNVSTALVDMYSKCGSVSIARVIFDGMDHRTVVSWNSMIDGYV 208
Query: 111 NNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQ-CGRIQD------AWELFKAMPMKS-VV 162
+ + A +F+ M ++ +MG C + D +L + + S V
Sbjct: 209 QSGDAEGAMLIFQKMLDEGVQPTNVTVMGALHACADLGDLERGKFVHKLVDQLKLDSDVS 268
Query: 163 ASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEG 222
NS+I + V A +F +R K +W+ MI Y + G E ++ F MQ
Sbjct: 269 VMNSLISMYSKCKRVDIAADIFKNLRNKTLVSWNAMILGYAQNGCVNEALNAFCEMQSRN 328
Query: 223 VRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGK 282
++ + +++SV+ A L+ + +H ++R D +V+V + L+ MY KCG + +
Sbjct: 329 IKPDSFTMVSVIPALAELSIPRQAKWIHGLVIRRFLDKNVFVMTALVDMYAKCGAIHTAR 388
Query: 283 LIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTG 342
+FD ++ ++ WN++I GY +GLG+ S+++F EM + P+D+T + LSACS++G
Sbjct: 389 KLFDMMNARHVITWNAMIDGYGTHGLGKTSVELFKEMKKGTIKPNDITFLCALSACSHSG 448
Query: 343 KVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSL 402
V+EG FESMK Y +EP +HY MVDLLGRAG++ A I+ MP +P ++G++
Sbjct: 449 LVEEGLCFFESMKKDYGIEPTMDHYGAMVDLLGRAGRLNQAWDFIQKMPIKPGITVYGAM 508
Query: 403 LGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVI 462
LGAC+ H +DL E AA ++ +L P + G ++LL+NIYA+ + VA++R M K +
Sbjct: 509 LGACKIHKNVDLGEKAAFEIFKLNPDDGGYHVLLANIYATASMWGKVAKVRTIMEKSGLQ 568
Query: 463 KPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDE 522
K PGCS +E+ +VH F SHP+ I LE + +R AGY PD++ + HDV++
Sbjct: 569 KTPGCSLVEIGNEVHSFYS-GTTSHPQSKKIYSYLETLVDEIRAAGYVPDTNSI-HDVED 626
Query: 523 EEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRD 582
+ KV L HSEKLA+A+GL+ G PI + KNLRVCGDCH+A K IS V GREII+RD
Sbjct: 627 DVKVQLLNTHSEKLAIAFGLLNTSTGTPIHIRKNLRVCGDCHNATKYISLVTGREIIVRD 686
Query: 583 ANRFHHFKDGLCSCRDYW 600
+RFH FKDG+CSC DYW
Sbjct: 687 MHRFHLFKDGVCSCGDYW 704
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 112/414 (27%), Positives = 199/414 (48%), Gaps = 18/414 (4%)
Query: 12 MVRGYVEEGMITEAGTLFWQMPEKNV----VSWTVMLGGFIRDSRIDDARRLFDMMPEK- 66
M++GY + + A + F +M +V ++T +L +S + + + +
Sbjct: 1 MLKGYAKSSSLDSALSFFSRMKHDSVRPVVYNFTYLLKLCGDNSDLKRGKEIHGSVITSG 60
Query: 67 ---DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFE 123
++ A T +V Y + ++++ +FD MP+++++ W TMISGY N VA L
Sbjct: 61 FSWNLFAMTGVVNMYAKCRQINDAYNMFDRMPERDLVCWNTMISGYAQNGFAKVALMLVL 120
Query: 124 VMPEK----NEVSWTAML--MGYTQCGRIQDAWE--LFKAMPMKSVVASNSMILGLGQNG 175
M E+ + ++ ++L + T+ RI A + +A V S +++ + G
Sbjct: 121 RMSEEGHRPDSITIVSILPAVADTRLLRIGMAVHGYVLRAGFESLVNVSTALVDMYSKCG 180
Query: 176 EVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLS 235
V ARV+FD M + +W+ MI Y + G + +F M EGV+ +++ L
Sbjct: 181 SVSIARVIFDGMDHRTVVSWNSMIDGYVQSGDAEGAMLIFQKMLDEGVQPTNVTVMGALH 240
Query: 236 VCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVM 295
CA L L+ G+ VH + + + D DV V + LI+MY KC + IF N +K +V
Sbjct: 241 ACADLGDLERGKFVHKLVDQLKLDSDVSVMNSLISMYSKCKRVDIAADIFKNLRNKTLVS 300
Query: 296 WNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMK 355
WN++I GYAQ G ++L F EM S + PD T+V V+ A + ++ + I +
Sbjct: 301 WNAMILGYAQNGCVNEALNAFCEMQSRNIKPDSFTMVSVIPALAELSIPRQAKWIHGLVI 360
Query: 356 SKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTH 409
++L + +VD+ + G + A KL + M I W +++ TH
Sbjct: 361 RRFL-DKNVFVMTALVDMYAKCGAIHTARKLFDMMNAR-HVITWNAMIDGYGTH 412
>gi|224126883|ref|XP_002319950.1| predicted protein [Populus trichocarpa]
gi|222858326|gb|EEE95873.1| predicted protein [Populus trichocarpa]
Length = 746
Score = 420 bits (1080), Expect = e-114, Method: Compositional matrix adjust.
Identities = 226/616 (36%), Positives = 347/616 (56%), Gaps = 18/616 (2%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV----VSWTVMLGGFIRDSRIDDA 56
P+ +V W A+VR Y G A ++ +M V S+ +L ++
Sbjct: 133 FPDPDVFLWNAIVRCYSRHGFFGHAIEMYARMQVACVSPDGFSFPCVLKACSALPALEMG 192
Query: 57 RR----LFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
RR +F E DV Q +V Y + G + +F + + ++SWT++ISGY N
Sbjct: 193 RRVHGQIFRHGFESDVFVQNGLVALYAKCGEIVRANAVFGRLVDRTIVSWTSIISGYAQN 252
Query: 113 NRIDVARKLFEVMPEKN-EVSWTAM---LMGYTQCGRIQDAWELFKAMPMKSVVASNSMI 168
+ A ++F M + N W A+ L YT ++ + + + ++
Sbjct: 253 GQPIEALRIFSEMRKTNVRPDWIALVSVLRAYTDVEDLEHGKSIHGCVIKMGLECEFDLL 312
Query: 169 LGL----GQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVR 224
+ L + G V AR+ F+Q+ W+ MI Y + GY E I+LF LM+ + +R
Sbjct: 313 ISLTSLYAKCGHVMVARLFFNQVENPSLIFWNAMISGYVKNGYAEEAIELFRLMKSKNIR 372
Query: 225 VNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLI 284
+ ++ S ++ CA + SL+ R + + +F DV V + LI Y KCG + + +
Sbjct: 373 PDSITVTSSIAACAQIGSLELARWMDEYISMSEFRNDVIVNTSLIDTYAKCGSVDMARFV 432
Query: 285 FDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKV 344
FD KD+V+W++++ GY +G G +S+ +FH M +GV P+DVT VG+L+AC +G V
Sbjct: 433 FDRIPDKDVVVWSAMMVGYGLHGQGRESIILFHAMRQAGVSPNDVTFVGLLTACKNSGLV 492
Query: 345 KEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLG 404
+EG ++F M+ Y +EP+ +HYAC+VDLLGRAG ++ A + MP EP +WG+LL
Sbjct: 493 EEGWDLFHRMRD-YGIEPRHQHYACVVDLLGRAGHLDRAYNFVMNMPIEPGVSVWGALLS 551
Query: 405 ACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKP 464
AC+ H + L E AA++L L+P N G Y+ LSN+YAS + VA++R MR++ + K
Sbjct: 552 ACKIHRHVTLGEYAAERLFSLDPYNTGHYVQLSNLYASSCLWDCVAKVRVLMREKGLTKH 611
Query: 465 PGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEE 524
G S IE+ K+ F D +HP I +E + L+EAG+ P + VLHD++ EE
Sbjct: 612 LGYSVIEINGKLQAFQAGD-KTHPRSKEIFEEVEDLERRLKEAGFVPHTESVLHDLNYEE 670
Query: 525 KVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDAN 584
+L HSE+LA+AYGL+ P G +R+ KNLR C +CH+AIKLISK++ REI++RDA
Sbjct: 671 TEETLCNHSERLAIAYGLISTPPGTTLRITKNLRACDNCHAAIKLISKLVSREIVVRDAC 730
Query: 585 RFHHFKDGLCSCRDYW 600
RFHHFKDG CSC DYW
Sbjct: 731 RFHHFKDGACSCGDYW 746
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/258 (31%), Positives = 134/258 (51%), Gaps = 5/258 (1%)
Query: 175 GEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVL 234
GEV AR +FD+ + D W+ +++ Y R G+ I+++ MQ V + S VL
Sbjct: 121 GEVSCARKLFDKFPDPDVFLWNAIVRCYSRHGFFGHAIEMYARMQVACVSPDGFSFPCVL 180
Query: 235 SVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIV 294
C++L +L+ GR+VH Q+ R F+ DV+V + L+ +Y KCGE+V+ +F + IV
Sbjct: 181 KACSALPALEMGRRVHGQIFRHGFESDVFVQNGLVALYAKCGEIVRANAVFGRLVDRTIV 240
Query: 295 MWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESM 354
W SIISGYAQ G ++L++F EM + V PD + LV VL A + ++ G+ I +
Sbjct: 241 SWTSIISGYAQNGQPIEALRIFSEMRKTNVRPDWIALVSVLRAYTDVEDLEHGKSIHGCV 300
Query: 355 KSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDL 414
K +E + + + L + G V A + P I W +++ ++K
Sbjct: 301 -IKMGLECEFDLLISLTSLYAKCGHVMVARLFFNQVE-NPSLIFWNAMISG---YVKNGY 355
Query: 415 AEVAAKKLLQLEPKNAGP 432
AE A + ++ KN P
Sbjct: 356 AEEAIELFRLMKSKNIRP 373
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 80/340 (23%), Positives = 169/340 (49%), Gaps = 30/340 (8%)
Query: 82 GRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVM------PE-------- 127
G V R++FD+ P +V W ++ Y + A +++ M P+
Sbjct: 121 GEVSCARKLFDKFPDPDVFLWNAIVRCYSRHGFFGHAIEMYARMQVACVSPDGFSFPCVL 180
Query: 128 KNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQM 187
K + A+ MG G+I F+ V N ++ + GE+ +A VF ++
Sbjct: 181 KACSALPALEMGRRVHGQI------FRHGFESDVFVQNGLVALYAKCGEIVRANAVFGRL 234
Query: 188 REKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGR 247
++ +W+ +I Y + G +E + +F+ M+K VR ++ +L+SVL + L+HG+
Sbjct: 235 VDRTIVSWTSIISGYAQNGQPIEALRIFSEMRKTNVRPDWIALVSVLRAYTDVEDLEHGK 294
Query: 248 QVHAQLVR----CQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGY 303
+H +++ C+FD+ + L ++Y KCG ++ +L F+ + ++ WN++ISGY
Sbjct: 295 SIHGCVIKMGLECEFDLLI----SLTSLYAKCGHVMVARLFFNQVENPSLIFWNAMISGY 350
Query: 304 AQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPK 363
+ G E+++++F M S + PD +T+ ++AC+ G ++ R + E +
Sbjct: 351 VKNGYAEEAIELFRLMKSKNIRPDSITVTSSIAACAQIGSLELARWMDEYISMSEFRNDV 410
Query: 364 TEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
+ + ++D + G V+ A + + +P + D ++W +++
Sbjct: 411 IVNTS-LIDTYAKCGSVDMARFVFDRIP-DKDVVVWSAMM 448
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 55/106 (51%)
Query: 245 HGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYA 304
H Q++A+L+ ++ + L+ GE+ + +FD F D+ +WN+I+ Y+
Sbjct: 90 HLNQIYAKLLVTGLQYGGFLIAKLVNKASNIGEVSCARKLFDKFPDPDVFLWNAIVRCYS 149
Query: 305 QYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREI 350
++G +++++ M + V PD + VL ACS ++ GR +
Sbjct: 150 RHGFFGHAIEMYARMQVACVSPDGFSFPCVLKACSALPALEMGRRV 195
>gi|359482004|ref|XP_002276764.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Vitis vinifera]
Length = 681
Score = 420 bits (1080), Expect = e-114, Method: Compositional matrix adjust.
Identities = 238/639 (37%), Positives = 364/639 (56%), Gaps = 53/639 (8%)
Query: 12 MVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMM------PE 65
+V Y + G + A LF MP++N+VSWT M+ G ++S+ +A R F M P
Sbjct: 46 LVNMYSKCGELDHALKLFDTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPT 105
Query: 66 KDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISG----YVNNNRIDVARKL 121
+ A ++ + G ++ G+++ K + S + S Y + A K+
Sbjct: 106 Q--FAFSSAIRACASLGSIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKV 163
Query: 122 FEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVV------------------- 162
FE MP K+EVSWTAM+ GY++ G ++A FK M + V
Sbjct: 164 FEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKAC 223
Query: 163 ----ASNSMILGLG----------------QNGEVQKARVVFDQMRE-KDDATWSGMIKV 201
+ +S ++ LG + G+++ A VF E ++ +++ +I
Sbjct: 224 KFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDG 283
Query: 202 YERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVD 261
Y + + +F ++++G+ N + S++ CA+ A+L+ G Q+HAQ+++ FD D
Sbjct: 284 YVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDED 343
Query: 262 VYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFS 321
+V+S+L+ MY KCG L + FD + WNS++S + Q+GLG+ ++K+F M
Sbjct: 344 PFVSSILVDMYGKCGLLEQAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVD 403
Query: 322 SGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVE 381
GV P+ +T + +L+ CS+ G V+EG + F SM Y V P EHY+C++DLLGRAG+++
Sbjct: 404 RGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLK 463
Query: 382 DAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYA 441
+A + I MPFEP+A W S LGACR H ++ ++AA+KL++LEPKN+G +LLSNIYA
Sbjct: 464 EAKEFINRMPFEPNAFGWCSFLGACRIHGDKEMGKLAAEKLVKLEPKNSGALVLLSNIYA 523
Query: 442 SQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIG 501
++ ++ DV +R MR NV K PG SW++V K H+F D SHP I L+ +
Sbjct: 524 NERQWEDVRSVRMRMRDGNVKKLPGYSWVDVGYKTHVFGAED-WSHPRKSAIYEKLDTLL 582
Query: 502 GLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCG 561
++ AGY P + V D+D+ K L HSE++AVA+ L+ +P G PI V KNLRVC
Sbjct: 583 DQIKAAGYVPRTDSVPLDMDDSMKEKLLHRHSERIAVAFALISMPIGKPIIVKKNLRVCV 642
Query: 562 DCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
DCHSAIK ISKV GR+II+RD +RFHHF DG CSC DYW
Sbjct: 643 DCHSAIKFISKVTGRKIIVRDNSRFHHFTDGSCSCGDYW 681
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 96/352 (27%), Positives = 176/352 (50%), Gaps = 21/352 (5%)
Query: 72 TNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEV 131
++V Y + G +D ++FD MP++N++SWT MISG N++ A + F M EV
Sbjct: 44 NHLVNMYSKCGELDHALKLFDTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEV 103
Query: 132 ----SWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQN--------GEVQK 179
++++ + G I+ ++ + +K + S L +G N G +
Sbjct: 104 PTQFAFSSAIRACASLGSIEMGKQM-HCLALKFGIGSE---LFVGSNLEDMYSKCGAMFD 159
Query: 180 ARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCAS 239
A VF++M KD+ +W+ MI Y + G E + F M E V ++ L S L C +
Sbjct: 160 ACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGA 219
Query: 240 LASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFD-NFASKDIVMWNS 298
L + GR VH+ +V+ F+ D++V + L MY K G++ +F + +++V +
Sbjct: 220 LKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTC 279
Query: 299 IISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIF-ESMKSK 357
+I GY + EK L VF E+ G+ P++ T ++ AC+ +++G ++ + MK
Sbjct: 280 LIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKIN 339
Query: 358 YLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTH 409
+ +P + +VD+ G+ G +E A++ + + +P I W SL+ H
Sbjct: 340 FDEDPFVS--SILVDMYGKCGLLEQAIQAFDEIG-DPTEIAWNSLVSVFGQH 388
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 119/284 (41%), Gaps = 34/284 (11%)
Query: 164 SNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGV 223
+N ++ + GE+ A +FD M +++ +W+ MI + E I F M+ G
Sbjct: 43 TNHLVNMYSKCGELDHALKLFDTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGE 102
Query: 224 RVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKL 283
+ S + CASL S++ G+Q+H ++ +++V S L MY KCG +
Sbjct: 103 VPTQFAFSSAIRACASLGSIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACK 162
Query: 284 IFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGK 343
+F+ KD V W ++I GY++ G E++L F +M V D L L AC
Sbjct: 163 VFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKA 222
Query: 344 VKEGREI----------------------------FESMKSKYLVEPKTEH---YACMVD 372
K GR + ES + + ++ + + Y C++D
Sbjct: 223 CKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLID 282
Query: 373 LLGRAGQVEDAMKL---IEAMPFEPDAIIWGSLLGACRTHMKLD 413
Q+E + + + EP+ + SL+ AC L+
Sbjct: 283 GYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALE 326
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 98/198 (49%), Gaps = 2/198 (1%)
Query: 229 SLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNF 288
+L V+ A L G+Q+HA L+ + ++ + L+ MY KCGEL +FD
Sbjct: 7 ALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTM 66
Query: 289 ASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGR 348
+++V W ++ISG +Q ++++ F M G +P + AC+ G ++ G+
Sbjct: 67 PQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGK 126
Query: 349 EIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRT 408
++ + K+ + + + + D+ + G + DA K+ E MP + D + W +++
Sbjct: 127 QM-HCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCK-DEVSWTAMIDGYSK 184
Query: 409 HMKLDLAEVAAKKLLQLE 426
+ + A +A KK++ E
Sbjct: 185 IGEFEEALLAFKKMIDEE 202
>gi|356540333|ref|XP_003538644.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14820-like [Glycine max]
Length = 721
Score = 420 bits (1080), Expect = e-114, Method: Compositional matrix adjust.
Identities = 219/568 (38%), Positives = 340/568 (59%), Gaps = 9/568 (1%)
Query: 41 TVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEM----PK 96
+ ++ + RI DAR LFD M +DVV M+ GY Q+ D ++++EM +
Sbjct: 155 SALIAMYAACGRIMDARFLFDKMSHRDVVTWNIMIDGYSQNAHYDHVLKLYEEMKTSGTE 214
Query: 97 KNVISWTTMISGYVNNNRIDVARKLFEVMPEKN----EVSWTAMLMGYTQCGRIQDAWEL 152
+ I T++S + + + + + + + T+++ Y CG + A E+
Sbjct: 215 PDAIILCTVLSACAHAGNLSYGKAIHQFIKDNGFRVGSHIQTSLVNMYANCGAMHLAREV 274
Query: 153 FKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVI 212
+ +P K +V S +M+ G + G VQ AR +FD+M EKD WS MI Y LE +
Sbjct: 275 YDQLPSKHMVVSTAMLSGYAKLGMVQDARFIFDRMVEKDLVCWSAMISGYAESYQPLEAL 334
Query: 213 DLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMY 272
LF MQ+ + + +++SV+S CA++ +L + +H + F + + + LI MY
Sbjct: 335 QLFNEMQRRRIVPDQITMLSVISACANVGALVQAKWIHTYADKNGFGRTLPINNALIDMY 394
Query: 273 IKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLV 332
KCG LVK + +F+N K+++ W+S+I+ +A +G + ++ +FH M + P+ VT +
Sbjct: 395 AKCGNLVKAREVFENMPRKNVISWSSMINAFAMHGDADSAIALFHRMKEQNIEPNGVTFI 454
Query: 333 GVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPF 392
GVL ACS+ G V+EG++ F SM +++ + P+ EHY CMVDL RA + AM+LIE MPF
Sbjct: 455 GVLYACSHAGLVEEGQKFFSSMINEHRISPQREHYGCMVDLYCRANHLRKAMELIETMPF 514
Query: 393 EPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAEL 452
P+ IIWGSL+ AC+ H +++L E AA +LL+LEP + G ++LSNIYA + R+ DV +
Sbjct: 515 PPNVIIWGSLMSACQNHGEIELGEFAATRLLELEPDHDGALVVLSNIYAKEKRWDDVGLV 574
Query: 453 RKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPD 512
RK M+ + V K CS IEV +VH+F D H + I + L+ + L+ GY P
Sbjct: 575 RKLMKHKGVSKEKACSRIEVNNEVHVFMMAD-RYHKQSDEIYKKLDAVVSQLKLVGYTPS 633
Query: 513 SSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISK 572
+S +L D++EEEK + +HSEKLA+ YGL+ + IR++KNLR+C DCHS +KL+SK
Sbjct: 634 TSGILVDLEEEEKKEVVLWHSEKLALCYGLIGERKESCIRIVKNLRICEDCHSFMKLVSK 693
Query: 573 VMGREIILRDANRFHHFKDGLCSCRDYW 600
V EI++RD RFHHF G+CSCRDYW
Sbjct: 694 VHRIEIVMRDRTRFHHFNGGICSCRDYW 721
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/364 (22%), Positives = 154/364 (42%), Gaps = 56/364 (15%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM----PEKNVVSWTVMLGGFIRDSRIDDA 56
M R+VV+W M+ GY + L+ +M E + + +L +
Sbjct: 177 MSHRDVVTWNIMIDGYSQNAHYDHVLKLYEEMKTSGTEPDAIILCTVLSACAHAGNLSYG 236
Query: 57 RRLFDMMPEKDVVA----QTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+ + + + QT++V Y G + RE++D++P K+++ T M+SGY
Sbjct: 237 KAIHQFIKDNGFRVGSHIQTSLVNMYANCGAMHLAREVYDQLPSKHMVVSTAMLSGYAKL 296
Query: 113 NRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVA--------- 163
+ AR +F+ M EK+ V W+AM+ GY + + +A +LF M + +V
Sbjct: 297 GMVQDARFIFDRMVEKDLVCWSAMISGYAESYQPLEALQLFNEMQRRRIVPDQITMLSVI 356
Query: 164 ------------------------------SNSMILGLGQNGEVQKARVVFDQMREKDDA 193
+N++I + G + KAR VF+ M K+
Sbjct: 357 SACANVGALVQAKWIHTYADKNGFGRTLPINNALIDMYAKCGNLVKAREVFENMPRKNVI 416
Query: 194 TWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQL 253
+WS MI + G I LF M+++ + N + I VL C+ ++ G++ + +
Sbjct: 417 SWSSMINAFAMHGDADSAIALFHRMKEQNIEPNGVTFIGVLYACSHAGLVEEGQKFFSSM 476
Query: 254 V---RCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFA-SKDIVMWNSIISGYAQYG-- 307
+ R + Y ++ +Y + L K + + ++++W S++S +G
Sbjct: 477 INEHRISPQREHY--GCMVDLYCRANHLRKAMELIETMPFPPNVIIWGSLMSACQNHGEI 534
Query: 308 -LGE 310
LGE
Sbjct: 535 ELGE 538
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 104/199 (52%), Gaps = 10/199 (5%)
Query: 198 MIKVYERKGYELEVIDLFTLMQKEGV---RVNFPSLISVLSVCASLASLDHGRQVHAQLV 254
+++ + R + L+ +++ G R +FP L+ +S L++L+ G ++H
Sbjct: 86 LLRQFSRGPTPENTLSLYLHLRRNGFPLDRFSFPPLLKAVS---KLSALNLGLEIHGLAS 142
Query: 255 RCQF-DVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSL 313
+ F D ++ S LI MY CG ++ + +FD + +D+V WN +I GY+Q + L
Sbjct: 143 KFGFFHADPFIQSALIAMYAACGRIMDARFLFDKMSHRDVVTWNIMIDGYSQNAHYDHVL 202
Query: 314 KVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSK-YLVEPKTEHYACMVD 372
K++ EM +SG PD + L VLSAC++ G + G+ I + +K + V + +V+
Sbjct: 203 KLYEEMKTSGTEPDAIILCTVLSACAHAGNLSYGKAIHQFIKDNGFRVGSHIQ--TSLVN 260
Query: 373 LLGRAGQVEDAMKLIEAMP 391
+ G + A ++ + +P
Sbjct: 261 MYANCGAMHLAREVYDQLP 279
>gi|224106277|ref|XP_002314110.1| predicted protein [Populus trichocarpa]
gi|222850518|gb|EEE88065.1| predicted protein [Populus trichocarpa]
Length = 738
Score = 420 bits (1080), Expect = e-114, Method: Compositional matrix adjust.
Identities = 231/650 (35%), Positives = 359/650 (55%), Gaps = 51/650 (7%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEK-----NVVSWTVMLGGFIRDSRIDD 55
+P N+ +W ++R + + +F QM + N ++ ++ S +
Sbjct: 90 IPRPNLYTWNTLIRAFASSPKPIQGLLVFIQMLHESQRFPNSYTFPFVIKAATEVSSLLA 149
Query: 56 ARRLFDMMPE----KDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVN 111
+ + M+ + D+ +++ Y G +D +F ++ +K+++SW +MISG+V
Sbjct: 150 GQAIHGMVMKASFGSDLFISNSLIHFYSSLGDLDSAYLVFSKIVEKDIVSWNSMISGFVQ 209
Query: 112 NNRIDVARKLFEVM------PEK---------------------------------NEVS 132
+ A +LF+ M P + N +
Sbjct: 210 GGSPEEALQLFKRMKMENARPNRVTMVGVLSACAKRIDLEFGRWACDYIERNGIDINLIL 269
Query: 133 WTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDD 192
AML Y +CG ++DA LF M K +V+ +MI G + G+ AR VFD M +D
Sbjct: 270 SNAMLDMYVKCGSLEDARRLFDKMEEKDIVSWTTMIDGYAKVGDYDAARRVFDVMPREDI 329
Query: 193 ATWSGMIKVYERKGYELEVIDLFTLMQ-KEGVRVNFPSLISVLSVCASLASLDHGRQVHA 251
W+ +I Y++ G E + +F +Q + + N +L S L+ CA L ++D G +H
Sbjct: 330 TAWNALISSYQQNGKPKEALAIFRELQLNKNTKPNEVTLASTLAACAQLGAMDLGGWIHV 389
Query: 252 QLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEK 311
+ + ++ ++ + LI MY KCG L K +F + +D+ +W+++I+G A +G G
Sbjct: 390 YIKKQGIKLNFHITTSLIDMYSKCGHLEKALEVFYSVERRDVFVWSAMIAGLAMHGHGRA 449
Query: 312 SLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMV 371
++ +F +M + V P+ VT +L ACS++G V EGR F M+ Y V P ++HYACMV
Sbjct: 450 AIDLFSKMQETKVKPNAVTFTNLLCACSHSGLVDEGRLFFNQMRPVYGVVPGSKHYACMV 509
Query: 372 DLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAG 431
D+LGRAG +E+A++LIE MP P A +WG+LLGACR + ++LAE+A +LL+ + N G
Sbjct: 510 DILGRAGCLEEAVELIEKMPIVPSASVWGALLGACRIYGNVELAEMACSRLLETDSNNHG 569
Query: 432 PYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHP 491
Y+LLSNIYA G++ V+ LR++M+ + K PGCS IEV +H F D SHP
Sbjct: 570 AYVLLSNIYAKAGKWDCVSRLRQHMKVSGLEKEPGCSSIEVNGIIHEFLVGD-NSHPLST 628
Query: 492 MIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEE-KVHSLRYHSEKLAVAYGLVKLPEGVP 550
I L++I ++ GY D S +L V+EE K H+L HSEKLA+AYGL+++ P
Sbjct: 629 EIYSKLDEIVARIKSTGYVSDESHLLQFVEEEYMKEHALNLHSEKLAIAYGLIRMEPSQP 688
Query: 551 IRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
IR++KNLRVCGDCHS KLISK+ R+I+LRD RFHHF G CSC DYW
Sbjct: 689 IRIVKNLRVCGDCHSVAKLISKLYNRDILLRDRYRFHHFSGGNCSCMDYW 738
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 89/368 (24%), Positives = 171/368 (46%), Gaps = 45/368 (12%)
Query: 84 VDEGREIFDEMPKKNVISWTTMISGYVNNNR-----IDVARKLFEVMPEKNEVSWTAMLM 138
+D ++FD++P+ N+ +W T+I + ++ + + + L E N ++ ++
Sbjct: 80 LDYACKVFDQIPRPNLYTWNTLIRAFASSPKPIQGLLVFIQMLHESQRFPNSYTFPFVIK 139
Query: 139 GYTQCGRIQDAWELFKAMPMKS-----VVASNSMILGLGQNGEVQKARVVFDQMREKDDA 193
T+ + A + M MK+ + SNS+I G++ A +VF ++ EKD
Sbjct: 140 AATEVSSLL-AGQAIHGMVMKASFGSDLFISNSLIHFYSSLGDLDSAYLVFSKIVEKDIV 198
Query: 194 TWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQL 253
+W+ MI + + G E + LF M+ E R N +++ VLS CA L+ GR +
Sbjct: 199 SWNSMISGFVQGGSPEEALQLFKRMKMENARPNRVTMVGVLSACAKRIDLEFGRWACDYI 258
Query: 254 VRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIV------------------- 294
R D+++ +++ ++ MY+KCG L + +FD KDIV
Sbjct: 259 ERNGIDINLILSNAMLDMYVKCGSLEDARRLFDKMEEKDIVSWTTMIDGYAKVGDYDAAR 318
Query: 295 ------------MWNSIISGYAQYGLGEKSLKVFHEM-FSSGVMPDDVTLVGVLSACSYT 341
WN++IS Y Q G +++L +F E+ + P++VTL L+AC+
Sbjct: 319 RVFDVMPREDITAWNALISSYQQNGKPKEALAIFRELQLNKNTKPNEVTLASTLAACAQL 378
Query: 342 GKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGS 401
G + G I +K K ++ ++D+ + G +E A+++ ++ D +W +
Sbjct: 379 GAMDLGGWIHVYIK-KQGIKLNFHITTSLIDMYSKCGHLEKALEVFYSVE-RRDVFVWSA 436
Query: 402 LLGACRTH 409
++ H
Sbjct: 437 MIAGLAMH 444
>gi|356542389|ref|XP_003539649.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Glycine max]
Length = 676
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 236/639 (36%), Positives = 340/639 (53%), Gaps = 53/639 (8%)
Query: 12 MVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQ 71
++R + A +F Q P N+ + ++ G + + DA ++ M +
Sbjct: 41 LLRSSLHFAATQYATVVFAQTPHPNIFLYNTLIRGMVSNDAFRDAVSVYASMRQHGFAPD 100
Query: 72 T---NMVLGYCQDGRVDEGREI---FDEMPKKNVISW-----TTMISGYVNNNRIDVARK 120
VL C R+ + + K W T ++ Y N + ARK
Sbjct: 101 NFTFPFVLKACT--RLPHYFHVGLSLHSLVIKTGFDWDVFVKTGLVCLYSKNGFLTDARK 158
Query: 121 LFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAM------------------------ 156
+F+ +PEKN VSWTA++ GY + G +A LF+ +
Sbjct: 159 VFDEIPEKNVVSWTAIICGYIESGCFGEALGLFRGLLEMGLRPDSFTLVRILYACSRVGD 218
Query: 157 ---------------PMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKV 201
+ +V + S++ + G +++AR VFD M EKD WS +I+
Sbjct: 219 LASGRWIDGYMRESGSVGNVFVATSLVDMYAKCGSMEEARRVFDGMVEKDVVCWSALIQG 278
Query: 202 YERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVD 261
Y G E +D+F MQ+E VR + +++ V S C+ L +L+ G + +F +
Sbjct: 279 YASNGMPKEALDVFFEMQRENVRPDCYAMVGVFSACSRLGALELGNWARGLMDGDEFLSN 338
Query: 262 VYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFS 321
+ + LI Y KCG + + K +F KD V++N++ISG A G + VF +M
Sbjct: 339 PVLGTALIDFYAKCGSVAQAKEVFKGMRRKDCVVFNAVISGLAMCGHVGAAFGVFGQMVK 398
Query: 322 SGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVE 381
G+ PD T VG+L C++ G V +G F M S + V P EHY CMVDL RAG +
Sbjct: 399 VGMQPDGNTFVGLLCGCTHAGLVDDGHRYFSGMSSVFSVTPTIEHYGCMVDLQARAGLLV 458
Query: 382 DAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYA 441
+A LI +MP E ++I+WG+LLG CR H LAE K+L++LEP N+G Y+LLSNIY+
Sbjct: 459 EAQDLIRSMPMEANSIVWGALLGGCRLHKDTQLAEHVLKQLIELEPWNSGHYVLLSNIYS 518
Query: 442 SQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIG 501
+ R+ + ++R ++ ++ + K PGCSW+EV+ VH F D SHP I LE +
Sbjct: 519 ASHRWDEAEKIRSSLNQKGMQKLPGCSWVEVDGVVHEFLVGD-TSHPLSHKIYEKLESLF 577
Query: 502 GLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCG 561
LREAGY P + FVL DV+EEEK + L HSEKLAVA+ L+ IRV+KNLRVCG
Sbjct: 578 KDLREAGYNPTTEFVLFDVEEEEKEYFLGCHSEKLAVAFALISTGAKDVIRVVKNLRVCG 637
Query: 562 DCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
DCH AIKL+SKV GREII+RD NRFHHF +G CSCRDYW
Sbjct: 638 DCHEAIKLVSKVTGREIIVRDNNRFHHFTEGSCSCRDYW 676
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/250 (30%), Positives = 118/250 (47%), Gaps = 51/250 (20%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVV--SWTVM--------------- 43
+PE+NVVSWTA++ GY+E G EA LF + E + S+T++
Sbjct: 163 IPEKNVVSWTAIICGYIESGCFGEALGLFRGLLEMGLRPDSFTLVRILYACSRVGDLASG 222
Query: 44 --LGGFIRDS--------------------RIDDARRLFDMMPEKDVVAQTNMVLGYCQD 81
+ G++R+S +++ARR+FD M EKDVV + ++ GY +
Sbjct: 223 RWIDGYMRESGSVGNVFVATSLVDMYAKCGSMEEARRVFDGMVEKDVVCWSALIQGYASN 282
Query: 82 GRVDEGREIFDEMPKKNV-ISWTTMISGYVNNNRIDV------ARKLFEVMP-EKNEVSW 133
G E ++F EM ++NV M+ + +R+ AR L + N V
Sbjct: 283 GMPKEALDVFFEMQRENVRPDCYAMVGVFSACSRLGALELGNWARGLMDGDEFLSNPVLG 342
Query: 134 TAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQM----RE 189
TA++ Y +CG + A E+FK M K V N++I GL G V A VF QM +
Sbjct: 343 TALIDFYAKCGSVAQAKEVFKGMRRKDCVVFNAVISGLAMCGHVGAAFGVFGQMVKVGMQ 402
Query: 190 KDDATWSGMI 199
D T+ G++
Sbjct: 403 PDGNTFVGLL 412
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/348 (23%), Positives = 147/348 (42%), Gaps = 61/348 (17%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPE---- 65
T +V Y + G +T+A +F ++PEKNVVSWT ++ G+I +A LF + E
Sbjct: 141 TGLVCLYSKNGFLTDARKVFDEIPEKNVVSWTAIICGYIESGCFGEALGLFRGLLEMGLR 200
Query: 66 -----------------------------------KDVVAQTNMVLGYCQDGRVDEGREI 90
+V T++V Y + G ++E R +
Sbjct: 201 PDSFTLVRILYACSRVGDLASGRWIDGYMRESGSVGNVFVATSLVDMYAKCGSMEEARRV 260
Query: 91 FDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKN-EVSWTAMLMGYTQCGRIQDA 149
FD M +K+V+ W+ +I GY +N A +F M +N AM+ ++ C R+ A
Sbjct: 261 FDGMVEKDVVCWSALIQGYASNGMPKEALDVFFEMQRENVRPDCYAMVGVFSACSRL-GA 319
Query: 150 WEL------------FKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSG 197
EL F + P V ++I + G V +A+ VF MR KD ++
Sbjct: 320 LELGNWARGLMDGDEFLSNP----VLGTALIDFYAKCGSVAQAKEVFKGMRRKDCVVFNA 375
Query: 198 MIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQ 257
+I G+ +F M K G++ + + + +L C +D G + + +
Sbjct: 376 VISGLAMCGHVGAAFGVFGQMVKVGMQPDGNTFVGLLCGCTHAGLVDDGHRYFSGMSSV- 434
Query: 258 FDVDVYVA--SVLITMYIKCGELVKGK-LIFDNFASKDIVMWNSIISG 302
F V + ++ + + G LV+ + LI + ++W +++ G
Sbjct: 435 FSVTPTIEHYGCMVDLQARAGLLVEAQDLIRSMPMEANSIVWGALLGG 482
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 68/164 (41%), Gaps = 1/164 (0%)
Query: 240 LASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSI 299
L SL +Q H L+R D Y+ ++L+ + ++F +I ++N++
Sbjct: 13 LKSLHQAKQCHCLLLRLGLHQDTYLINLLLRSSLHFAATQYATVVFAQTPHPNIFLYNTL 72
Query: 300 ISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYL 359
I G ++ V+ M G PD+ T VL AC+ S+ K
Sbjct: 73 IRGMVSNDAFRDAVSVYASMRQHGFAPDNFTFPFVLKACTRLPHYFHVGLSLHSLVIKTG 132
Query: 360 VEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
+ +V L + G + DA K+ + +P E + + W +++
Sbjct: 133 FDWDVFVKTGLVCLYSKNGFLTDARKVFDEIP-EKNVVSWTAII 175
>gi|302761610|ref|XP_002964227.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
gi|300167956|gb|EFJ34560.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
Length = 736
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 234/626 (37%), Positives = 354/626 (56%), Gaps = 35/626 (5%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEK-------NVVSWTVMLG-----GFI 48
M ++ +V+W A++ GY G A ++ M K + ++++ L G I
Sbjct: 120 MGKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSVVGDI 179
Query: 49 RDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISG 108
R +AR + D + Q ++ Y + G ++ R++FD + ++VI+W TMISG
Sbjct: 180 SQGREIEARTVASGYA-SDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISG 238
Query: 109 YVNNNRIDVARKLFEVM----PEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMK----- 159
Y A +LF+ M P+ N V++ +L T C ++D E +A+ K
Sbjct: 239 YAKQGAATQALELFQRMGPNDPKPNVVTFIGLL---TACTNLED-LEQGRAIHRKVKEHG 294
Query: 160 ---SVVASNSMI-LGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLF 215
+V N ++ + + +++AR VF+++R +D TW+ +I Y + G + +D+F
Sbjct: 295 YESDLVIGNVLLNMYTKCSSSLEEARQVFERLRTRDVITWNILIVAYVQYGQAKDALDIF 354
Query: 216 TLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKC 275
MQ E V N +L +VLS CA L + G+ VHA + + DV + + L+ MY +C
Sbjct: 355 KQMQLENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRC 414
Query: 276 GELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVL 335
G L +F K +V W+++I+ YAQ+G L+ F E+ G+ DDVT+V L
Sbjct: 415 GSLDDTVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTL 474
Query: 336 SACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPD 395
SACS+ G +KEG + F SM + + P H+ CMVDLL RAG++E A LI MPF PD
Sbjct: 475 SACSHGGMLKEGVQSFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPD 534
Query: 396 AIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYI-LLSNIYASQGRFHDVAELRK 454
A+ W SLL C+ H A A KL +LE ++ + LLSN+YA GR+ DV RK
Sbjct: 535 AVAWTSLLSGCKLHNDTKRAARVADKLFELESEDEHSTVTLLSNVYAEAGRWDDV---RK 591
Query: 455 NMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSS 514
+R K PGCS+IE+ VH F D SHPE +I ++++ +++AGY PD
Sbjct: 592 TRNRRAARKNPGCSYIEINDTVHEFVAGD-KSHPEEELIAAEIKRLSKQMKDAGYVPDMR 650
Query: 515 FVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVM 574
VLH+V EEEK L YHSEKLA+AYGL+ P G P+ ++KNLR C DCH+A K IS+++
Sbjct: 651 MVLHNVKEEEKEQMLCYHSEKLAIAYGLISTPPGTPLHIVKNLRACVDCHAAAKFISRIV 710
Query: 575 GREIILRDANRFHHFKDGLCSCRDYW 600
GR+I++RD+ RFHHF++G CSC+DYW
Sbjct: 711 GRKIVVRDSTRFHHFENGSCSCKDYW 736
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 109/427 (25%), Positives = 210/427 (49%), Gaps = 25/427 (5%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV----VSWTVMLGGFIRDSRIDDARRLF 60
N VSWT +V + G EA + +M + + + V +G + + L
Sbjct: 22 NSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAMFVVAIGVCSSSKDLKQGQLLH 81
Query: 61 DMMPEK-----DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRI 115
M+ E D++ T ++ Y + ++ R+ FDEM KK +++W +I+GY N
Sbjct: 82 AMILETQLLEFDIILGTALITMYARCRDLELARKTFDEMGKKTLVTWNALIAGYSRNGDH 141
Query: 116 DVARKLFEVMPEK-------NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMI 168
A K+++ M K + +++++ L + G I E+ +A + S AS+S++
Sbjct: 142 RGALKIYQDMVSKSPEGMKPDAITFSSALYACSVVGDISQGREI-EARTVASGYASDSIV 200
Query: 169 LGLGQN-----GEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGV 223
N G ++ AR VFD+++ +D W+ MI Y ++G + ++LF M
Sbjct: 201 QNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYAKQGAATQALELFQRMGPNDP 260
Query: 224 RVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKC-GELVKGK 282
+ N + I +L+ C +L L+ GR +H ++ ++ D+ + +VL+ MY KC L + +
Sbjct: 261 KPNVVTFIGLLTACTNLEDLEQGRAIHRKVKEHGYESDLVIGNVLLNMYTKCSSSLEEAR 320
Query: 283 LIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTG 342
+F+ ++D++ WN +I Y QYG + +L +F +M V P+++TL VLSAC+ G
Sbjct: 321 QVFERLRTRDVITWNILIVAYVQYGQAKDALDIFKQMQLENVAPNEITLSNVLSACAVLG 380
Query: 343 KVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSL 402
++G+ + + S + M ++ R G ++D + + A+ + + W +L
Sbjct: 381 AKRQGKAVHALIASGRCKADVVLENSLM-NMYNRCGSLDDTVGVFAAIR-DKSLVSWSTL 438
Query: 403 LGACRTH 409
+ A H
Sbjct: 439 IAAYAQH 445
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 136/269 (50%), Gaps = 11/269 (4%)
Query: 172 GQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLI 231
G+ G V A VF + + +W+ ++ + R G+ E + + M EG+R + +
Sbjct: 3 GKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAMFV 62
Query: 232 SVLSVCASLASLDHGRQVHAQLVRCQF-DVDVYVASVLITMYIKCGELVKGKLIFDNFAS 290
+ VC+S L G+ +HA ++ Q + D+ + + LITMY +C +L + FD
Sbjct: 63 VAIGVCSSSKDLKQGQLLHAMILETQLLEFDIILGTALITMYARCRDLELARKTFDEMGK 122
Query: 291 KDIVMWNSIISGYAQYGLGEKSLKVFHEMFS---SGVMPDDVTLVGVLSACSYTGKVKEG 347
K +V WN++I+GY++ G +LK++ +M S G+ PD +T L ACS G + +G
Sbjct: 123 KTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSVVGDISQG 182
Query: 348 REI-FESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGAC 406
REI ++ S Y + ++ ++++ + G +E A K+ + + D I W +++
Sbjct: 183 REIEARTVASGYASDSIVQN--ALINMYSKCGSLESARKVFDRLK-NRDVIAWNTMISG- 238
Query: 407 RTHMKLDLAEVAAKKLLQLEPKNAGPYIL 435
+ K A A + ++ P + P ++
Sbjct: 239 --YAKQGAATQALELFQRMGPNDPKPNVV 265
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/235 (20%), Positives = 87/235 (37%), Gaps = 48/235 (20%)
Query: 271 MYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVT 330
MY KCG + +F + V W I++ +A+ G ++L + M G+ PD
Sbjct: 1 MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60
Query: 331 LVGVLSACSYTGKVKEG------------------------------------REIFESM 354
V + CS + +K+G R+ F+ M
Sbjct: 61 FVVAIGVCSSSKDLKQGQLLHAMILETQLLEFDIILGTALITMYARCRDLELARKTFDEM 120
Query: 355 KSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAM------PFEPDAIIWGSLLGACRT 408
K LV + ++ R G A+K+ + M +PDAI + S L AC
Sbjct: 121 GKKTLVT-----WNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSV 175
Query: 409 HMKLDLA-EVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVI 462
+ E+ A+ + ++ L N+Y+ G ++ ++ R+VI
Sbjct: 176 VGDISQGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVI 230
>gi|326504484|dbj|BAJ91074.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 823
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 233/625 (37%), Positives = 357/625 (57%), Gaps = 39/625 (6%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV----VSWTVMLGGFIRDSRIDDARR 58
ER VV WT M+ YV+ G +A LF M E + + M+ ++
Sbjct: 211 ERTVVVWTLMITRYVQGGCAGKAVELFLGMLEDGFEPDGYTMSSMVSACAEQGSAGLGQQ 270
Query: 59 LFDMMPEKDVVAQTNMVLGYCQ-------DGRVDEGREIFDEMPKKNVISWTTMISGYVN 111
L ++ +V+ T + G + ++ R++F MP NV+SWT +ISGYV
Sbjct: 271 LHSLVLRLGLVSDTCVSCGLVDMYTKLQMEQSMECARKVFKRMPTHNVMSWTALISGYVQ 330
Query: 112 -----NNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRI--QDAWELFKAMPMKSVVAS 164
NN +++ ++ E N ++++++L C + QD+ A MK+ + +
Sbjct: 331 CGGQENNAVELLCEMLNESIEPNHLTYSSLLKA---CANLSDQDSGRQIHARVMKTSIGN 387
Query: 165 -----NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQ 219
N+++ ++G +++AR FDQ+ E++ + S I R + ++
Sbjct: 388 VNVVGNALVSMYAESGCMEEARKAFDQLYERNLLSTSSDIGETGRSNASWS-----SQIE 442
Query: 220 KEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELV 279
V V+ + S+LS A++ G+Q+HA ++ F+ D +++ L++MY +CG L
Sbjct: 443 SMDVGVSTFTFASLLSAAATVGLPTKGQQLHALSIKTGFESDKGISNSLVSMYSRCGYLD 502
Query: 280 KGKLIFDNFAS-KDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSAC 338
FD +++ W SIIS A++G E++L +FH+M SGV P+DVT + VLSAC
Sbjct: 503 DACRAFDEMEDDHNVISWTSIISALAKHGHAERALSLFHDMILSGVKPNDVTYIAVLSAC 562
Query: 339 SYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAII 398
S+ G VKEG+E F SM+ + + P+ EHYACMVDLL R+G V++A++ I MP + DA++
Sbjct: 563 SHVGLVKEGKEYFRSMQKDHRLIPRMEHYACMVDLLARSGLVQEALEFINEMPCKADALV 622
Query: 399 WGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRK 458
W +LLGACRT+ +++ E+AA+ ++ LEP++ PY+LLSN+YA G + +VA +R MR
Sbjct: 623 WKTLLGACRTYENIEIGEIAARHVIDLEPQDPAPYVLLSNLYAHGGLWDEVARIRSLMRH 682
Query: 459 RNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLRE---AGYCPDSSF 515
RN+ K G SW+ V +H F D HP + K+ L+RE GY PD+S
Sbjct: 683 RNLSKETGLSWMHVGNTIHEFRAGD----TSHPRAQEIYAKLAVLIREIKDIGYVPDTSI 738
Query: 516 VLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMG 575
VLHD+ ++ K L HSEK+AVA+GL+ PIR+ KNLRVC DCHSAIK ISK G
Sbjct: 739 VLHDMSDKLKEQCLLQHSEKIAVAFGLITTLPTKPIRIFKNLRVCADCHSAIKYISKSTG 798
Query: 576 REIILRDANRFHHFKDGLCSCRDYW 600
REIILRD+NRFH KDG CSC +YW
Sbjct: 799 REIILRDSNRFHRMKDGKCSCGEYW 823
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 108/490 (22%), Positives = 202/490 (41%), Gaps = 41/490 (8%)
Query: 4 RNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVML----------------GGF 47
R++VSWTAM G EA L +M E + L GG
Sbjct: 109 RDLVSWTAMAFCLTRNGAEQEALVLLGEMLESGLRPNAFTLCAAAHACFPGELFRSSGGT 168
Query: 48 IRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMIS 107
+ I DV ++ + ++G + R++F+ + ++ V+ WT MI+
Sbjct: 169 VLGFAIKTG------FWGTDVSVGCALIDMFARNGDLVAARKVFNGLVERTVVVWTLMIT 222
Query: 108 GYVNNNRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVA 163
YV A +LF M E + + ++M+ + G +L + +V+
Sbjct: 223 RYVQGGCAGKAVELFLGMLEDGFEPDGYTMSSMVSACAEQGSAGLGQQLHSLVLRLGLVS 282
Query: 164 SNSMILG-------LGQNGEVQKARVVFDQMREKDDATWSGMIKVY-ERKGYELEVIDLF 215
+ G L ++ AR VF +M + +W+ +I Y + G E ++L
Sbjct: 283 DTCVSCGLVDMYTKLQMEQSMECARKVFKRMPTHNVMSWTALISGYVQCGGQENNAVELL 342
Query: 216 TLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKC 275
M E + N + S+L CA+L+ D GRQ+HA++++ V + L++MY +
Sbjct: 343 CEMLNESIEPNHLTYSSLLKACANLSDQDSGRQIHARVMKTSIGNVNVVGNALVSMYAES 402
Query: 276 GELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVL 335
G + + + FD ++++ +S I + G S E GV T +L
Sbjct: 403 GCMEEARKAFDQLYERNLLSTSSDI---GETGRSNASWSSQIESMDVGV--STFTFASLL 457
Query: 336 SACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPD 395
SA + G +G+++ ++ K E +V + R G ++DA + + M + +
Sbjct: 458 SAAATVGLPTKGQQL-HALSIKTGFESDKGISNSLVSMYSRCGYLDDACRAFDEMEDDHN 516
Query: 396 AIIWGSLLGACRTHMKLDLA-EVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRK 454
I W S++ A H + A + +L N YI + + + G + E +
Sbjct: 517 VISWTSIISALAKHGHAERALSLFHDMILSGVKPNDVTYIAVLSACSHVGLVKEGKEYFR 576
Query: 455 NMRKRNVIKP 464
+M+K + + P
Sbjct: 577 SMQKDHRLIP 586
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/347 (23%), Positives = 142/347 (40%), Gaps = 47/347 (13%)
Query: 161 VVASNSMILGLGQNGEVQKARVVFDQMRE-KDDATWSGMIKVYERKGYELEVIDLFTLMQ 219
+ +NS++ + G V+ AR VFD MR +D +W+ M R G E E + L M
Sbjct: 79 ALVANSLLTMYSKCGHVRAARRVFDGMRGLRDLVSWTAMAFCLTRNGAEQEALVLLGEML 138
Query: 220 KEGVRVNFPSLISVLSVC--ASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGE 277
+ G+R N +L + C L G + + + DV V LI M+ + G+
Sbjct: 139 ESGLRPNAFTLCAAAHACFPGELFRSSGGTVLGFAIKTGFWGTDVSVGCALIDMFARNGD 198
Query: 278 LVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSA 337
LV + +F+ + +V+W +I+ Y Q G K++++F M G PD T+ ++SA
Sbjct: 199 LVAARKVFNGLVERTVVVWTLMITRYVQGGCAGKAVELFLGMLEDGFEPDGYTMSSMVSA 258
Query: 338 CSYTGKVKEGREIFE------------------SMKSKYLVEPKTEHYACMVDLLGR--- 376
C+ G G+++ M +K +E E C + R
Sbjct: 259 CAEQGSAGLGQQLHSLVLRLGLVSDTCVSCGLVDMYTKLQMEQSME---CARKVFKRMPT 315
Query: 377 ----------------AGQVEDAMKLIEAM---PFEPDAIIWGSLLGACRTHMKLDLAEV 417
GQ +A++L+ M EP+ + + SLL AC D
Sbjct: 316 HNVMSWTALISGYVQCGGQENNAVELLCEMLNESIEPNHLTYSSLLKACANLSDQDSGRQ 375
Query: 418 AAKKLLQLEPKNAGPY-ILLSNIYASQGRFHDVAELRKNMRKRNVIK 463
++++ N L ++YA G + + + +RN++
Sbjct: 376 IHARVMKTSIGNVNVVGNALVSMYAESGCMEEARKAFDQLYERNLLS 422
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 124/263 (47%), Gaps = 17/263 (6%)
Query: 1 MPERNVVSWTAMVRGYVE-EGMITEAGTLFWQM----PEKNVVSWTVMLGGFIRDSRIDD 55
MP NV+SWTA++ GYV+ G A L +M E N ++++ +L S D
Sbjct: 313 MPTHNVMSWTALISGYVQCGGQENNAVELLCEMLNESIEPNHLTYSSLLKACANLSDQDS 372
Query: 56 ARRLFDMMPEKDV----VAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVN 111
R++ + + + V +V Y + G ++E R+ FD++ ++N++S ++ I G
Sbjct: 373 GRQIHARVMKTSIGNVNVVGNALVSMYAESGCMEEARKAFDQLYERNLLSTSSDI-GETG 431
Query: 112 NNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVA-----SNS 166
+ + ++ + + ++ ++L G +L A+ +K+ SNS
Sbjct: 432 RSNASWSSQIESMDVGVSTFTFASLLSAAATVGLPTKGQQL-HALSIKTGFESDKGISNS 490
Query: 167 MILGLGQNGEVQKARVVFDQMREKDDA-TWSGMIKVYERKGYELEVIDLFTLMQKEGVRV 225
++ + G + A FD+M + + +W+ +I + G+ + LF M GV+
Sbjct: 491 LVSMYSRCGYLDDACRAFDEMEDDHNVISWTSIISALAKHGHAERALSLFHDMILSGVKP 550
Query: 226 NFPSLISVLSVCASLASLDHGRQ 248
N + I+VLS C+ + + G++
Sbjct: 551 NDVTYIAVLSACSHVGLVKEGKE 573
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 76/164 (46%), Gaps = 18/164 (10%)
Query: 246 GRQVHAQLVRCQ-FDVDVYVASVLITMYIKCGELVKGKLIFDNFAS-KDIVMWNSIISGY 303
GR +H +L+ + D D VA+ L+TMY KCG + + +FD +D+V W ++
Sbjct: 62 GRALHRRLLGTEVLDADALVANSLLTMYSKCGHVRAARRVFDGMRGLRDLVSWTAMAFCL 121
Query: 304 AQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYL-VEP 362
+ G +++L + EM SG+ P+ TL AC + G E+F S L
Sbjct: 122 TRNGAEQEALVLLGEMLESGLRPNAFTLCAAAHAC-FPG------ELFRSSGGTVLGFAI 174
Query: 363 KTEHYA-------CMVDLLGRAGQVEDAMKLIEAMPFEPDAIIW 399
KT + ++D+ R G + A K+ + E ++W
Sbjct: 175 KTGFWGTDVSVGCALIDMFARNGDLVAARKVFNGL-VERTVVVW 217
>gi|334185551|ref|NP_001189950.1| uncharacterized protein [Arabidopsis thaliana]
gi|75274240|sp|Q9LUJ2.1|PP249_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g22690
gi|9279687|dbj|BAB01244.1| unnamed protein product [Arabidopsis thaliana]
gi|332643145|gb|AEE76666.1| uncharacterized protein [Arabidopsis thaliana]
Length = 842
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 243/649 (37%), Positives = 357/649 (55%), Gaps = 50/649 (7%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEK-----NVVSWTVMLGG--------- 46
M ERNVVSWT+M+ GY +A LF++M N V+ ++
Sbjct: 195 MSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLET 254
Query: 47 ------FIRDS--------------------RIDDARRLFDMMPEKDVVAQTNMVLGYCQ 80
FIR+S ID A+RLFD ++ M Y +
Sbjct: 255 GEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVR 314
Query: 81 DGRVDEGREIFDEMPKKNV----ISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSW--- 133
G E +F+ M V IS + IS I + + SW
Sbjct: 315 QGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNI 374
Query: 134 -TAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDD 192
A++ Y +C R A+ +F M K+VV NS++ G +NGEV A F+ M EK+
Sbjct: 375 CNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNI 434
Query: 193 ATWSGMIKVYERKGYELEVIDLFTLMQ-KEGVRVNFPSLISVLSVCASLASLDHGRQVHA 251
+W+ +I + E I++F MQ +EGV + +++S+ S C L +LD + ++
Sbjct: 435 VSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYY 494
Query: 252 QLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEK 311
+ + +DV + + L+ M+ +CG+ IF++ ++D+ W + I A G E+
Sbjct: 495 YIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAER 554
Query: 312 SLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMV 371
++++F +M G+ PD V VG L+ACS+ G V++G+EIF SM + V P+ HY CMV
Sbjct: 555 AIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMV 614
Query: 372 DLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAG 431
DLLGRAG +E+A++LIE MP EP+ +IW SLL ACR +++A AA+K+ L P+ G
Sbjct: 615 DLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTG 674
Query: 432 PYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHP 491
Y+LLSN+YAS GR++D+A++R +M+++ + KPPG S I++ K H FT D SHPE P
Sbjct: 675 SYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGD-ESHPEMP 733
Query: 492 MIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPI 551
I ML+++ G+ PD S VL DVDE+EK+ L HSEKLA+AYGL+ +G I
Sbjct: 734 NIEAMLDEVSQRASHLGHVPDLSNVLMDVDEKEKIFMLSRHSEKLAMAYGLISSNKGTTI 793
Query: 552 RVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
R++KNLRVC DCHS K SKV REIILRD NRFH+ + G CSC D+W
Sbjct: 794 RIVKNLRVCSDCHSFAKFASKVYNREIILRDNNRFHYIRQGKCSCGDFW 842
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 93/381 (24%), Positives = 180/381 (47%), Gaps = 33/381 (8%)
Query: 57 RRLFDMMPEKDVVAQTNMVLGYCQDGRVDE---GREIFDEMPK-KNVISWTTMISGYVNN 112
R L + DV T +V C+ G + +E+F+ + ++I GY ++
Sbjct: 53 RSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYASS 112
Query: 113 NRIDVARKLFEVM------PEKNEVSWTAMLMGYTQCGR-------IQDAWELFKAMPMK 159
+ A LF M P+K + G + C + IQ + K K
Sbjct: 113 GLCNEAILLFLRMMNSGISPDKYTFPF-----GLSACAKSRAKGNGIQIHGLIVKMGYAK 167
Query: 160 SVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLF-TLM 218
+ NS++ + GE+ AR VFD+M E++ +W+ MI Y R+ + + +DLF ++
Sbjct: 168 DLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMV 227
Query: 219 QKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGEL 278
+ E V N +++ V+S CA L L+ G +V+A + +V+ + S L+ MY+KC +
Sbjct: 228 RDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAI 287
Query: 279 VKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSAC 338
K +FD + + ++ + N++ S Y + GL ++L VF+ M SGV PD ++++ +S+C
Sbjct: 288 DVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSC 347
Query: 339 SYTGKVKEGREIFESMKSKYLVEPKTEHY----ACMVDLLGRAGQVEDAMKLIEAMPFEP 394
S + G+ Y++ E + ++D+ + + + A ++ + M
Sbjct: 348 SQLRNILWGKSCH-----GYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMS-NK 401
Query: 395 DAIIWGSLLGACRTHMKLDLA 415
+ W S++ + ++D A
Sbjct: 402 TVVTWNSIVAGYVENGEVDAA 422
>gi|297734691|emb|CBI16742.3| unnamed protein product [Vitis vinifera]
Length = 674
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 212/549 (38%), Positives = 332/549 (60%), Gaps = 37/549 (6%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MP+R +V+ +AM+ GY + G++ A +F M + NV SWT ++ G+ RD ++ A +LF
Sbjct: 126 MPDRTIVAESAMIDGYAKAGLMDSAQKVFDAMIDTNVFSWTSLISGYFRDGQVAKACQLF 185
Query: 61 DMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARK 120
D MP K+VV+ T MVLGY ++G +D+ R +F++MP+KN ISWT M+ YV+N R D A K
Sbjct: 186 DQMPAKNVVSWTTMVLGYARNGLIDQARSVFNQMPEKNTISWTAMMKSYVDNGRTDEALK 245
Query: 121 LFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKA 180
LF MP++N SW M+ G R+ +A++LF MP+++ V+ M+ GL +NG + A
Sbjct: 246 LFHEMPQRNLYSWNTMISGCLDGKRVNEAFKLFHLMPLRNAVSWTIMVSGLARNGFTKLA 305
Query: 181 RVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEG------------------ 222
R FDQM KD A W+ MI Y + +E +LF LM +
Sbjct: 306 REYFDQMPNKDIAAWNAMITAYVDECLIVEASELFNLMTERNIVTWNAMIDGYARHRPDG 365
Query: 223 -------------VRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLI 269
+R N ++ +L+ C + L Q HA + + + +++ LI
Sbjct: 366 EAMKHLILMLRSCIRPNETTMTIILTSCWGMLEL---MQAHALAIVVGCECETSLSNALI 422
Query: 270 TMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDV 329
TMY + G++ ++ F++ +KD+V W +++ + +G G+ +L VF M SG PD++
Sbjct: 423 TMYSRIGDISSSRIAFESLKAKDVVSWTAMLLAFTYHGHGDHALHVFGHMLKSGTKPDEI 482
Query: 330 TLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEA 389
T VGVLSACS+ G VK+G+++F+SM Y +EP+ EHY+C+VD+LGRAGQV +AM ++
Sbjct: 483 TFVGVLSACSHAGLVKKGQKLFDSMSRAYGLEPRAEHYSCLVDILGRAGQVHEAMDVVWK 542
Query: 390 MP-FEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHD 448
MP E D + G+LLGACR H +++A+ +KL++L+P ++G Y+LL+N++A++G + +
Sbjct: 543 MPECERDGAVLGALLGACRLHGNVEMADYIGQKLIELQPNSSGGYVLLANVFAARGNWDE 602
Query: 449 VAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRML-EKIGGLLREA 507
AE+RK M+ RNV K PG S IEV+ K H F D SHP+ I +L EK+ ++ E
Sbjct: 603 FAEVRKKMKDRNVRKVPGFSQIEVKGKCHAFFAGD-KSHPQVEEIYELLREKLLPIMHEM 661
Query: 508 GYCPDSSFV 516
GY + FV
Sbjct: 662 GYSQWNQFV 670
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 136/301 (45%), Gaps = 27/301 (8%)
Query: 165 NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVR 224
N I LG+ G V+ AR +FD+M D+ +++ MI Y + + LF M +
Sbjct: 73 NIKISQLGRCGNVRGARKLFDEMPHHDNVSYTAMITAYLKNNELRKAEKLFQTMPDRTIV 132
Query: 225 VNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLI 284
+++ A +D ++V ++ D +V+ + LI+ Y + G++ K +
Sbjct: 133 AE----SAMIDGYAKAGLMDSAQKVFDAMI----DTNVFSWTSLISGYFRDGQVAKACQL 184
Query: 285 FDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSY--TG 342
FD +K++V W +++ GYA+ GL +++ VF++ MP+ T+ SY G
Sbjct: 185 FDQMPAKNVVSWTTMVLGYARNGLIDQARSVFNQ------MPEKNTISWTAMMKSYVDNG 238
Query: 343 KVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSL 402
+ E ++F M + L T C+ +V +A KL MP +A+ W +
Sbjct: 239 RTDEALKLFHEMPQRNLYSWNTMISGCL-----DGKRVNEAFKLFHLMPLR-NAVSWTIM 292
Query: 403 L-GACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNV 461
+ G R ++A + Q+ K+ + + Y + + +EL M +RN+
Sbjct: 293 VSGLARN----GFTKLAREYFDQMPNKDIAAWNAMITAYVDECLIVEASELFNLMTERNI 348
Query: 462 I 462
+
Sbjct: 349 V 349
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 90/203 (44%), Gaps = 15/203 (7%)
Query: 260 VDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEM 319
+D+Y ++ I+ +CG + + +FD D V + ++I+ Y + K+ K+F M
Sbjct: 67 LDIYNCNIKISQLGRCGNVRGARKLFDEMPHHDNVSYTAMITAYLKNNELRKAEKLFQTM 126
Query: 320 FSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQ 379
++ + + G A G + +++F++M ++ + ++ R GQ
Sbjct: 127 PDRTIVAESAMIDGYAKA----GLMDSAQKVFDAM-----IDTNVFSWTSLISGYFRDGQ 177
Query: 380 VEDAMKLIEAMPFEPDAIIWGSL-LGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSN 438
V A +L + MP + + + W ++ LG R L + A Q+ KN + +
Sbjct: 178 VAKACQLFDQMPAK-NVVSWTTMVLGYARN----GLIDQARSVFNQMPEKNTISWTAMMK 232
Query: 439 IYASQGRFHDVAELRKNMRKRNV 461
Y GR + +L M +RN+
Sbjct: 233 SYVDNGRTDEALKLFHEMPQRNL 255
>gi|115465982|ref|NP_001056590.1| Os06g0112000 [Oryza sativa Japonica Group]
gi|7363286|dbj|BAA93030.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113594630|dbj|BAF18504.1| Os06g0112000 [Oryza sativa Japonica Group]
gi|215737111|dbj|BAG96040.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 734
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 228/617 (36%), Positives = 348/617 (56%), Gaps = 19/617 (3%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEK--------NVVSWTVMLGGFIRDSR 52
MP R+ V+W A+V GY G+ A + +M E+ +VS +
Sbjct: 120 MPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVSVLPACANARALAA 179
Query: 53 IDDARRLFDMMPEKDVVAQTNMVL-GYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVN 111
+A +++V +L YC+ G + R +FD MP KN +SW MI GY
Sbjct: 180 CREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQ 239
Query: 112 NNRIDVARKLFEVMPEKN-EVSWTAMLMGYTQCGRI------QDAWELFKAMPMKSVVAS 164
N A LF M E+ +V+ ++L CG + EL + + S V+
Sbjct: 240 NGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSV 299
Query: 165 -NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGV 223
N++I + V A VFD++ + +W+ MI + G + + LFT MQ E V
Sbjct: 300 MNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENV 359
Query: 224 RVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKL 283
+ + +L+SV+ A ++ R +H +R D DVYV + LI MY KCG + ++
Sbjct: 360 KPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARI 419
Query: 284 IFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGK 343
+F++ + ++ WN++I GY +G G+ ++++F EM S G++P++ T + VLSACS+ G
Sbjct: 420 LFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAGL 479
Query: 344 VKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
V EGRE F SMK Y +EP EHY MVDLLGRAG++++A I+ MP +P ++G++L
Sbjct: 480 VDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAWAFIQKMPMDPGLSVYGAML 539
Query: 404 GACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIK 463
GAC+ H ++LAE +A+K+ +L P+ ++LL+NIYA+ + DVA +R M K + K
Sbjct: 540 GACKLHKNVELAEESAQKIFELGPQEGVYHVLLANIYANASMWKDVARVRTAMEKNGLQK 599
Query: 464 PPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEE 523
PG S I+++ ++H F +H + I L K+ ++ GY PD+ + HDV+++
Sbjct: 600 TPGWSIIQLKNEIHTFYS-GSTNHQQAKEIYSRLAKLIEEIKAVGYVPDTDSI-HDVEDD 657
Query: 524 EKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDA 583
K L HSEKLA+A+GL++ G I++ KNLRVC DCH+A KLIS V GREII+RD
Sbjct: 658 VKAQLLNTHSEKLAIAFGLIRTAPGTTIQIKKNLRVCNDCHNATKLISLVTGREIIMRDI 717
Query: 584 NRFHHFKDGLCSCRDYW 600
RFHHFKDG CSC DYW
Sbjct: 718 QRFHHFKDGKCSCGDYW 734
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 99/385 (25%), Positives = 160/385 (41%), Gaps = 73/385 (18%)
Query: 65 EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARK---- 120
+ + +A T + Y + R + R +FD MP ++ ++W +++GY N +A +
Sbjct: 91 DSEALAATALANMYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVR 150
Query: 121 -------------LFEVMPEKNEVSW-----------------------TAMLMGYTQCG 144
L V+P TA+L Y +CG
Sbjct: 151 MQEEEGERPDSITLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCG 210
Query: 145 RIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYER 204
I+ A +F MP K+ V+ N+MI G QNG+ ++A +F++M E
Sbjct: 211 DIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVE--------------- 255
Query: 205 KGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYV 264
EGV V S+++ L C L LD G +VH LVR D +V V
Sbjct: 256 ----------------EGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSV 299
Query: 265 ASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGV 324
+ LITMY KC + +FD + V WN++I G AQ G E ++++F M V
Sbjct: 300 MNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENV 359
Query: 325 MPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAM 384
PD TLV V+ A + + R I + ++ ++D+ + G+V A
Sbjct: 360 KPDSFTLVSVIPALADISDPLQARWI-HGYSIRLHLDQDVYVLTALIDMYAKCGRVNIAR 418
Query: 385 KLIEAMPFEPDAIIWGSLLGACRTH 409
L + E I W +++ +H
Sbjct: 419 ILFNS-ARERHVITWNAMIHGYGSH 442
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 61/122 (50%), Gaps = 1/122 (0%)
Query: 215 FTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIK 274
F M G + S+L +CA+ L GR VHAQL D + A+ L MY K
Sbjct: 47 FVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALANMYAK 106
Query: 275 CGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMF-SSGVMPDDVTLVG 333
C + +FD +D V WN++++GYA+ GL ++++ M G PD +TLV
Sbjct: 107 CRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVS 166
Query: 334 VL 335
VL
Sbjct: 167 VL 168
>gi|224129792|ref|XP_002320672.1| predicted protein [Populus trichocarpa]
gi|222861445|gb|EEE98987.1| predicted protein [Populus trichocarpa]
Length = 720
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 235/669 (35%), Positives = 368/669 (55%), Gaps = 85/669 (12%)
Query: 16 YVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMV 75
Y + ++T A F Q E NV S+ ++ + ++S I A LFD +P+ D+V+ ++
Sbjct: 53 YSKCNLLTTAHHAFNQTHEPNVFSFNALIAAYAKESLIHVAHHLFDQIPQPDLVSFNTLI 112
Query: 76 LGYCQDGRVDEGREIFDEMPKKNVI---------------------------------SW 102
Y G +F EM + ++ S+
Sbjct: 113 NAYADRGDTLSALSLFGEMREMGLVMDGFTFSGVITACCNHVGLIRQLHSLAFSSGFDSY 172
Query: 103 ----TTMISGYVNNNRIDVARKLFEVMPE--KNEVSWTAMLMGYTQCGRIQDAWELFKAM 156
++++ Y N ++ A +F M E ++EVSW +M++ Y Q R A L++ M
Sbjct: 173 VSVKNSLLTYYSKNGILEEAEMVFNGMGEEVRDEVSWNSMIVAYGQHKRGLKALALYRDM 232
Query: 157 ----------PMKSVVASNSMI---------------LGLGQNGEV-------------- 177
+ SV+ + S + G +N V
Sbjct: 233 VHRGFEIDMFTLASVLTTFSCVEDLSGGLQFHAKAIKTGFNKNRHVGSGLIDMYAKCGAG 292
Query: 178 -QKARVVFDQMREKDDATWSGMIKVY-ERKGYELEVIDLFTLMQKEGVRVNFPSLISVLS 235
++R VF+++ D W+ MI Y + K +E ++ F MQ+ G + S + +S
Sbjct: 293 MSESRKVFEEICGSDLVVWNTMISGYSQNKELSVEALECFRQMQRAGYWPDDCSFVCAIS 352
Query: 236 VCASLASLDHGRQVHAQLVRCQFDVD-VYVASVLITMYIKCGELVKGKLIFDNFASKDIV 294
C++L+S G+Q HA ++ + + + V + L+TMY KCG L + +F + V
Sbjct: 353 ACSNLSSPSQGKQFHALAMKSEIPSNQISVNNALVTMYSKCGNLQDARKLFQRMPQHNTV 412
Query: 295 MWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESM 354
NSII+GYAQ+G+G +SL +F +M ++ + P +TLV +LSAC++TG+V+EG++ F M
Sbjct: 413 TLNSIIAGYAQHGIGTESLNLFEQMLAASIAPTSITLVSILSACAHTGRVEEGKKYFNMM 472
Query: 355 KSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDL 414
K + +EP+ EHY+CM+DLLGRAG++ +A +LI+ MPF P + W +LLGACR + ++L
Sbjct: 473 KDIFGIEPEAEHYSCMIDLLGRAGKLSEAERLIDTMPFSPGSAAWAALLGACRKYGNMEL 532
Query: 415 AEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEK 474
AE AA + LQLEP NA PYI+L+++Y++ ++ + A +RK MR R + K PGCSWIE+ K
Sbjct: 533 AEKAANQFLQLEPTNAVPYIMLASMYSAARKWEEAARIRKLMRDRGIRKKPGCSWIELNK 592
Query: 475 KVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDS--SFVLHD-VDEEEKVHSLRY 531
+VH+F D SHP I L+++ ++ AGY PD +FV D E+EK L +
Sbjct: 593 RVHVFVAED-NSHPRIKEIHMYLDEMFVKMKRAGYVPDVRWAFVKDDETGEQEKEIMLAH 651
Query: 532 HSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKD 591
HSEKLAVA+GL+ G P+ V+KNLR+CGDCH+AIK +S + R+I +RDA RFH F+D
Sbjct: 652 HSEKLAVAFGLLFTKHGEPLLVVKNLRICGDCHNAIKFMSAIARRKITVRDAYRFHCFED 711
Query: 592 GLCSCRDYW 600
G CSC DYW
Sbjct: 712 GRCSCGDYW 720
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 89/209 (42%), Gaps = 17/209 (8%)
Query: 206 GYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHG-RQVHAQLVRCQFDVDVYV 264
G L I L +L+ N I + S C L + H Q H + +V+
Sbjct: 27 GKSLHTIYLKSLIPSSTYLSN--HFILLYSKCNLLTTAHHAFNQTH--------EPNVFS 76
Query: 265 ASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGV 324
+ LI Y K + +FD D+V +N++I+ YA G +L +F EM G+
Sbjct: 77 FNALIAAYAKESLIHVAHHLFDQIPQPDLVSFNTLINAYADRGDTLSALSLFGEMREMGL 136
Query: 325 MPDDVTLVGVLSA-CSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDA 383
+ D T GV++A C++ G +++ + S V K ++ + G +E+A
Sbjct: 137 VMDGFTFSGVITACCNHVGLIRQLHSLAFSSGFDSYVSVKNS----LLTYYSKNGILEEA 192
Query: 384 MKLIEAMPFE-PDAIIWGSLLGACRTHMK 411
+ M E D + W S++ A H +
Sbjct: 193 EMVFNGMGEEVRDEVSWNSMIVAYGQHKR 221
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 57/132 (43%), Gaps = 4/132 (3%)
Query: 229 SLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNF 288
S +L C + L G+ +H ++ Y+++ I +Y KC L F+
Sbjct: 10 SFRQILKSCIANKDLLTGKSLHTIYLKSLIPSSTYLSNHFILLYSKCNLLTTAHHAFNQT 69
Query: 289 ASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGR 348
++ +N++I+ YA+ E + V H +F PD V+ +++A + G
Sbjct: 70 HEPNVFSFNALIAAYAK----ESLIHVAHHLFDQIPQPDLVSFNTLINAYADRGDTLSAL 125
Query: 349 EIFESMKSKYLV 360
+F M+ LV
Sbjct: 126 SLFGEMREMGLV 137
>gi|225453758|ref|XP_002270092.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 687
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 216/609 (35%), Positives = 355/609 (58%), Gaps = 19/609 (3%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNV----VSWTVMLGGFIRDSRIDDARRLFDMMPE 65
M+RGY EA +L++ M E+ V ++ +L R + RR + +
Sbjct: 80 NTMIRGYARSQNPYEAVSLYYFMVERGVPVDNYTYPFVLAACARLGAVKLGRRFHCEVLK 139
Query: 66 K----DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKL 121
D+ ++ Y G ++FDE ++V++W MI+ ++N + A L
Sbjct: 140 NGFGSDLFVINALIQFYHNCGSFGCACDVFDESTVRDVVTWNIMINAHLNKGLSEKAFDL 199
Query: 122 FEVMPE-----KNEVSWTAMLMGYTQCGRIQDAWELF---KAMPMKSVVASNSMILGL-G 172
+ M + +EV+ +++ Q G ++ L K + + + N+ IL +
Sbjct: 200 LDEMTKLDNLRPDEVTMVSLVPACAQLGNLERGKFLHSYSKELGLDENLRVNNAILDMYC 259
Query: 173 QNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLIS 232
+ +++ A+ VF+++REKD +W+ M+ + GY E + LF MQ + ++ +L+
Sbjct: 260 KCDDIESAQEVFNRIREKDVLSWTSMLSGLAKSGYFQEALALFQKMQLNKIELDEITLVG 319
Query: 233 VLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKD 292
VLS CA +LD G+ +H + + + + D+ + + L+ MY KCG + +F ++
Sbjct: 320 VLSACAQTGALDQGKYIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVRN 379
Query: 293 IVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFE 352
+ WN++I G A +G GE ++ +F +M +MPDDVT + +L ACS+ G V EG +F+
Sbjct: 380 VFTWNALIGGLAMHGHGEDAISLFDQMEHDKLMPDDVTFIALLCACSHAGLVDEGLAMFQ 439
Query: 353 SMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKL 412
+MK+K+ +EP+ EHY C+VDLL RA +V+DA+ IE MP + ++++W +LLGACR+
Sbjct: 440 AMKNKFQIEPRMEHYGCVVDLLCRARKVDDALAFIENMPIKANSVLWATLLGACRSGGHF 499
Query: 413 DLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEV 472
DLAE +++++LEP + G Y++LSN+YA ++ +LRK M+ + + K PGCSWIE+
Sbjct: 500 DLAEKIGRRVIELEPDSCGRYVMLSNLYAGVSQWDHALKLRKQMKNKGIEKTPGCSWIEL 559
Query: 473 EKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLR-EAGYCPDSSFVLHDVDEEEKVHSLRY 531
+H F D SH + I M+E++ + + G+ P ++ VL D++EEEK HSL
Sbjct: 560 NGMIHQFVAGD-RSHLQTEQIYAMIEEMTRRVNLDGGHVPGTANVLFDIEEEEKEHSLFL 618
Query: 532 HSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKD 591
HSEKLA+A GL+ P G PIR++KNLRVC DCHS +K+ SKV REI+ RD +RFHHFK+
Sbjct: 619 HSEKLAIALGLISTPSGSPIRIVKNLRVCNDCHSFLKVTSKVYNREIVARDRSRFHHFKE 678
Query: 592 GLCSCRDYW 600
G CSC D+W
Sbjct: 679 GSCSCMDFW 687
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/343 (25%), Positives = 166/343 (48%), Gaps = 11/343 (3%)
Query: 76 LGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEK----NEV 131
L G ++ R++F +M + TMI GY + A L+ M E+ +
Sbjct: 53 LALSHSGDLNYARKLFTQMQNPDPFICNTMIRGYARSQNPYEAVSLYYFMVERGVPVDNY 112
Query: 132 SWTAMLMGYTQCGRIQDA----WELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQM 187
++ +L + G ++ E+ K + N++I G A VFD+
Sbjct: 113 TYPFVLAACARLGAVKLGRRFHCEVLKNGFGSDLFVINALIQFYHNCGSFGCACDVFDES 172
Query: 188 REKDDATWSGMIKVYERKGYELEVIDLFTLMQK-EGVRVNFPSLISVLSVCASLASLDHG 246
+D TW+ MI + KG + DL M K + +R + +++S++ CA L +L+ G
Sbjct: 173 TVRDVVTWNIMINAHLNKGLSEKAFDLLDEMTKLDNLRPDEVTMVSLVPACAQLGNLERG 232
Query: 247 RQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQY 306
+ +H+ D ++ V + ++ MY KC ++ + +F+ KD++ W S++SG A+
Sbjct: 233 KFLHSYSKELGLDENLRVNNAILDMYCKCDDIESAQEVFNRIREKDVLSWTSMLSGLAKS 292
Query: 307 GLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEH 366
G +++L +F +M + + D++TLVGVLSAC+ TG + +G+ I + K+ +
Sbjct: 293 GYFQEALALFQKMQLNKIELDEITLVGVLSACAQTGALDQGKYI-HLLIDKFEINCDLVL 351
Query: 367 YACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTH 409
+VD+ + G ++ A+++ M + W +L+G H
Sbjct: 352 ETALVDMYAKCGSIDLALQVFRRMRVR-NVFTWNALIGGLAMH 393
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 108/241 (44%), Gaps = 25/241 (10%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMP----EKNVVSWTVMLGGFIRDSRIDDARR 58
E++V+SWT+M+ G + G EA LF +M E + ++ +L + +D +
Sbjct: 276 EKDVLSWTSMLSGLAKSGYFQEALALFQKMQLNKIELDEITLVGVLSACAQTGALDQGKY 335
Query: 59 LFDMMPE----KDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNR 114
+ ++ + D+V +T +V Y + G +D ++F M +NV +W +I G +
Sbjct: 336 IHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFTWNALIGGLAMHGH 395
Query: 115 IDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILG 170
+ A LF+ M ++V++ A+L + G + + +F+AM K + G
Sbjct: 396 GEDAISLFDQMEHDKLMPDDVTFIALLCACSHAGLVDEGLAMFQAMKNKFQIEPRMEHYG 455
Query: 171 -----LGQNGEVQKARVVFDQMREKDDAT-WSGMIKVYERKGYELEVIDLFTLMQKEGVR 224
L + +V A + M K ++ W+ ++ G+ F L +K G R
Sbjct: 456 CVVDLLCRARKVDDALAFIENMPIKANSVLWATLLGACRSGGH-------FDLAEKIGRR 508
Query: 225 V 225
V
Sbjct: 509 V 509
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 60/141 (42%), Gaps = 14/141 (9%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV----VSWTVMLGGFIRDSRIDDA 56
M RNV +W A++ G G +A +LF QM + V++ +L +D+
Sbjct: 375 MRVRNVFTWNALIGGLAMHGHGEDAISLFDQMEHDKLMPDDVTFIALLCACSHAGLVDEG 434
Query: 57 RRLFDMMPEKDVVAQTNMVLG-----YCQDGRVDEGREIFDEMP-KKNVISWTTMISGYV 110
+F M K + G C+ +VD+ + MP K N + W T++
Sbjct: 435 LAMFQAMKNKFQIEPRMEHYGCVVDLLCRARKVDDALAFIENMPIKANSVLWATLLGACR 494
Query: 111 NNNRIDVA----RKLFEVMPE 127
+ D+A R++ E+ P+
Sbjct: 495 SGGHFDLAEKIGRRVIELEPD 515
>gi|359482590|ref|XP_002284545.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 648
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 216/549 (39%), Positives = 321/549 (58%), Gaps = 24/549 (4%)
Query: 67 DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVM- 125
D V T +V YC + R +FD +PK N+ W +I GY N + A +L+ M
Sbjct: 109 DTVIATKLVNLYCVCDSLSSARLLFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMF 168
Query: 126 -----PEKNEVSW---TAMLMGYTQCGR------IQDAWELFKAMPMKSVVASNSMILGL 171
P+ + + + GR +Q WE K V ++I
Sbjct: 169 DYGLVPDNFTFPFVLKACAALSAIEHGREIHEHVVQTGWE-------KDVFVGAALIDMY 221
Query: 172 GQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLI 231
+ G V AR VFD++ +D W+ M+ Y + G+ + L + M G+R +L+
Sbjct: 222 AKCGCVGSAREVFDKILVRDAVLWNSMLAAYSQNGHPDACLSLCSEMVLTGLRPTEATLV 281
Query: 232 SVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASK 291
+ +S A A+L GR++H R +F+ V + L+ MY KCG + + +F+ K
Sbjct: 282 TAISASADNAALPQGRELHGLSWRQEFESHDKVKTALVDMYAKCGSVRVARNLFERLGVK 341
Query: 292 DIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIF 351
+V WN++I+GYA +G ++L +F EM + PD +T VGVLSACS+ G ++EG F
Sbjct: 342 RVVSWNAMITGYAMHGHATEALDLFEEM-NRVAKPDHITFVGVLSACSHGGLLEEGWMFF 400
Query: 352 ESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMK 411
E+M Y ++P +HY CMVDLLG +G++++A LI M PD+ +WG+LL +C+ H
Sbjct: 401 ETMIRDYKIDPTVQHYTCMVDLLGHSGRLDEAYNLIMQMKVLPDSGVWGALLNSCKIHAN 460
Query: 412 LDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIE 471
++L E+A ++L++LEP +AG Y++LSNIYA G++ VA+LRK M R + K CSWIE
Sbjct: 461 VELGEIALERLIELEPDDAGNYVILSNIYAQAGKWEGVAKLRKLMTDRRLKKSIACSWIE 520
Query: 472 VEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRY 531
V+ KVH F D SHP I LE++GGL++EAGY P + V HDV+++EK + +
Sbjct: 521 VKNKVHAFLSGD-TSHPLSDEIYSELERVGGLMKEAGYSPSTGSVFHDVEDDEKANMVCS 579
Query: 532 HSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKD 591
HSE+LA+A+GL+ P G + + KNLR+C DCH AIK ISK+ REI +RD NR+HHFKD
Sbjct: 580 HSERLAIAFGLISTPPGTRLLITKNLRICEDCHVAIKFISKITEREITVRDVNRYHHFKD 639
Query: 592 GLCSCRDYW 600
G+CSC DYW
Sbjct: 640 GVCSCGDYW 648
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 100/184 (54%), Gaps = 10/184 (5%)
Query: 226 NFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIF 285
+ + S+L C + ++ G+Q+HAQ+ F D +A+ L+ +Y C L +L+F
Sbjct: 74 TYSNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSSARLLF 133
Query: 286 DNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVK 345
D +I +WN +I GYA G E +++++++MF G++PD+ T VL AC+ ++
Sbjct: 134 DRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALSAIE 193
Query: 346 EGREIFESMKSKYLVEPKTEH----YACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGS 401
GREI E ++V+ E A ++D+ + G V A ++ + + DA++W S
Sbjct: 194 HGREIHE-----HVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVR-DAVLWNS 247
Query: 402 LLGA 405
+L A
Sbjct: 248 MLAA 251
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 110/256 (42%), Gaps = 50/256 (19%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVV----SWTVMLGGFIRDSRIDDA 56
+P+ N+ W ++RGY G A L++QM + +V ++ +L S I+
Sbjct: 136 IPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALSAIEHG 195
Query: 57 RRLFDMMP----EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
R + + + EKDV ++ Y + G V RE+FD++ ++ + W +M++ Y N
Sbjct: 196 REIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLWNSMLAAYSQN 255
Query: 113 NRIDVARKLFEVM-------------------------PEKNE---VSW----------- 133
D L M P+ E +SW
Sbjct: 256 GHPDACLSLCSEMVLTGLRPTEATLVTAISASADNAALPQGRELHGLSWRQEFESHDKVK 315
Query: 134 TAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMR---EK 190
TA++ Y +CG ++ A LF+ + +K VV+ N+MI G +G +A +F++M +
Sbjct: 316 TALVDMYAKCGSVRVARNLFERLGVKRVVSWNAMITGYAMHGHATEALDLFEEMNRVAKP 375
Query: 191 DDATWSGMIKVYERKG 206
D T+ G++ G
Sbjct: 376 DHITFVGVLSACSHGG 391
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 63/139 (45%), Gaps = 13/139 (9%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMM---PEK 66
TA+V Y + G + A LF ++ K VVSW M+ G+ +A LF+ M +
Sbjct: 316 TALVDMYAKCGSVRVARNLFERLGVKRVVSWNAMITGYAMHGHATEALDLFEEMNRVAKP 375
Query: 67 DVVAQTNMVLGYCQDGRVDEGREIFDEMPK-----KNVISWTTMISGYVNNNRIDVARKL 121
D + ++ G ++EG F+ M + V +T M+ ++ R+D A L
Sbjct: 376 DHITFVGVLSACSHGGLLEEGWMFFETMIRDYKIDPTVQHYTCMVDLLGHSGRLDEAYNL 435
Query: 122 F---EVMPEKNEVSWTAML 137
+V+P+ W A+L
Sbjct: 436 IMQMKVLPDSG--VWGALL 452
>gi|356568841|ref|XP_003552616.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Glycine max]
Length = 658
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 220/566 (38%), Positives = 333/566 (58%), Gaps = 23/566 (4%)
Query: 53 IDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+D RRL ++D T ++ Y + G +D R++FDE ++ + W +
Sbjct: 98 LDVHRRLVSSGFDQDPFLATKLINMYYELGSIDRARKVFDETRERTIYVWNALFRALA-- 155
Query: 113 NRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLG 172
+ ++L ++ + N + + YT + EL P++ ++ IL G
Sbjct: 156 -MVGCGKELLDLYVQMNWIGIPSDRFTYTFVLKACVVSEL-SVSPLQKGKEIHAHILRHG 213
Query: 173 ----------------QNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFT 216
+ G V A VF M K+ +WS MI + + ++ ++LF
Sbjct: 214 YEANIHVMTTLLDVYAKFGSVSYANSVFCAMPTKNFVSWSAMIACFAKNEMPMKALELFQ 273
Query: 217 LMQKEGVRV--NFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIK 274
LM E N ++++VL CA LA+L+ G+ +H ++R D + V + LITMY +
Sbjct: 274 LMMLEAHDSVPNSVTMVNVLQACAGLAALEQGKLIHGYILRRGLDSILPVLNALITMYGR 333
Query: 275 CGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGV 334
CGE++ G+ +FDN ++D+V WNS+IS Y +G G+K++++F M G P ++ + V
Sbjct: 334 CGEILMGQRVFDNMKNRDVVSWNSLISIYGMHGFGKKAIQIFENMIHQGSSPSYISFITV 393
Query: 335 LSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEP 394
L ACS+ G V+EG+ +FESM SKY + P EHYACMVDLLGRA ++++A+KLIE M FEP
Sbjct: 394 LGACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMHFEP 453
Query: 395 DAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRK 454
+WGSLLG+CR H ++LAE A+ L +LEP+NAG Y+LL++IYA + + + K
Sbjct: 454 GPTVWGSLLGSCRIHCNVELAERASTLLFELEPRNAGNYVLLADIYAEAKMWSEAKSVMK 513
Query: 455 NMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSS 514
+ R + K PGCSWIEV++KV+ F D +P+ I +L K+ ++ GY P ++
Sbjct: 514 LLEARGLQKLPGCSWIEVKRKVYSFVSVD-EHNPQIEEIHALLVKLSNEMKAQGYVPQTN 572
Query: 515 FVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVM 574
VL+D+DEEEK + HSEKLAVA+GL+ +G IR+ KNLR+C DCH+ K ISK
Sbjct: 573 VVLYDLDEEEKERIVLGHSEKLAVAFGLINTVKGETIRIRKNLRLCEDCHAVTKFISKFA 632
Query: 575 GREIILRDANRFHHFKDGLCSCRDYW 600
REI++RD NRFHHFKDG+CSC DYW
Sbjct: 633 NREILVRDVNRFHHFKDGVCSCGDYW 658
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 99/200 (49%), Gaps = 7/200 (3%)
Query: 237 CASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMW 296
CA SL G VH +LV FD D ++A+ LI MY + G + + + +FD + I +W
Sbjct: 88 CAQQNSLSDGLDVHRRLVSSGFDQDPFLATKLINMYYELGSIDRARKVFDETRERTIYVW 147
Query: 297 NSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYT----GKVKEGREIFE 352
N++ A G G++ L ++ +M G+ D T VL AC + +++G+EI
Sbjct: 148 NALFRALAMVGCGKELLDLYVQMNWIGIPSDRFTYTFVLKACVVSELSVSPLQKGKEIHA 207
Query: 353 SMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKL 412
+ ++ E ++D+ + G V A + AMP + + + W +++ AC ++
Sbjct: 208 HIL-RHGYEANIHVMTTLLDVYAKFGSVSYANSVFCAMPTK-NFVSWSAMI-ACFAKNEM 264
Query: 413 DLAEVAAKKLLQLEPKNAGP 432
+ + +L+ LE ++ P
Sbjct: 265 PMKALELFQLMMLEAHDSVP 284
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/294 (21%), Positives = 117/294 (39%), Gaps = 59/294 (20%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVV 69
T ++ Y E G I A +F + E+ + W + + + + L D+ + + +
Sbjct: 117 TKLINMYYELGSIDRARKVFDETRERTIYVWNALFRAL---AMVGCGKELLDLYVQMNWI 173
Query: 70 A------QTNMVLGYC-----QDGRVDEGREIFDEMPKK----NVISWTTMISGYVNNNR 114
VL C + +G+EI + + N+ TT++ Y
Sbjct: 174 GIPSDRFTYTFVLKACVVSELSVSPLQKGKEIHAHILRHGYEANIHVMTTLLDVYAKFGS 233
Query: 115 IDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMK---SVVAS------- 164
+ A +F MP KN VSW+AM+ + + A ELF+ M ++ SV S
Sbjct: 234 VSYANSVFCAMPTKNFVSWSAMIACFAKNEMPMKALELFQLMMLEAHDSVPNSVTMVNVL 293
Query: 165 -------------------------------NSMILGLGQNGEVQKARVVFDQMREKDDA 193
N++I G+ GE+ + VFD M+ +D
Sbjct: 294 QACAGLAALEQGKLIHGYILRRGLDSILPVLNALITMYGRCGEILMGQRVFDNMKNRDVV 353
Query: 194 TWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGR 247
+W+ +I +Y G+ + I +F M +G ++ S I+VL C+ ++ G+
Sbjct: 354 SWNSLISIYGMHGFGKKAIQIFENMIHQGSSPSYISFITVLGACSHAGLVEEGK 407
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 95/202 (47%), Gaps = 14/202 (6%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDM 62
E N+ T ++ Y + G ++ A ++F MP KN VSW+ M+ F ++ A LF +
Sbjct: 215 EANIHVMTTLLDVYAKFGSVSYANSVFCAMPTKNFVSWSAMIACFAKNEMPMKALELFQL 274
Query: 63 M------PEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVIS----WTTMISGYVNN 112
M + V N++ +++G+ I + ++ + S +I+ Y
Sbjct: 275 MMLEAHDSVPNSVTMVNVLQACAGLAALEQGKLIHGYILRRGLDSILPVLNALITMYGRC 334
Query: 113 NRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASN-SMILGL 171
I + +++F+ M ++ VSW +++ Y G + A ++F+ M + S S I L
Sbjct: 335 GEILMGQRVFDNMKNRDVVSWNSLISIYGMHGFGKKAIQIFENMIHQGSSPSYISFITVL 394
Query: 172 G---QNGEVQKARVVFDQMREK 190
G G V++ +++F+ M K
Sbjct: 395 GACSHAGLVEEGKILFESMLSK 416
>gi|224140095|ref|XP_002323422.1| predicted protein [Populus trichocarpa]
gi|222868052|gb|EEF05183.1| predicted protein [Populus trichocarpa]
Length = 574
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 214/521 (41%), Positives = 325/521 (62%), Gaps = 13/521 (2%)
Query: 90 IFDEMPKKNVISWTTMISGYVNNNRID----VARKLFEVMPEKNEVSWTAML------MG 139
+F++M +++ +SW+ MI G+V N + R+L + + S ++ MG
Sbjct: 57 LFNKMEERDPVSWSVMIGGFVKNGDYERCFQTFRELIRAGSKPDNFSLPFVIKACRDTMG 116
Query: 140 YTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMI 199
GR+ + L + + + V S +++ + G + A+ +FD+M +KD T + MI
Sbjct: 117 LIM-GRLIHSTVLKNGLHLDNFVCS-TLVDMYAKCGMIDNAKQLFDRMPKKDLVTRTVMI 174
Query: 200 KVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFD 259
Y G E LF M+++G + +++++++ CA L +++ R VH + ++
Sbjct: 175 AGYAECGKPNESWVLFDQMRRDGFVPDKVAMVTIVNACAKLGAMNKARLVHDYVCARRYS 234
Query: 260 VDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEM 319
+DV + + +I MY KCG + + IFD K+++ W+++I Y +G G ++L++FH M
Sbjct: 235 LDVELGTAMIDMYAKCGSIDSSREIFDRMEQKNVISWSAMIGAYGYHGQGREALELFHMM 294
Query: 320 FSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQ 379
+SG++P+ +T + +L ACS+ G V +G ++F M Y V P +HY CMVDLLGRAG+
Sbjct: 295 LNSGIIPNRITFISLLYACSHAGLVDDGLQLFSLMSVSYGVRPDVKHYTCMVDLLGRAGR 354
Query: 380 VEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNI 439
++ A++LIE M E D IW + LGACR H ++DLAE AAK LL L+ +N G YILLSNI
Sbjct: 355 LDQALRLIENMEVEKDEGIWCAFLGACRIHRQVDLAEKAAKLLLSLQTQNPGHYILLSNI 414
Query: 440 YASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEK 499
YA+ GR+ DVA++R M KR + K PG +WIEV+ ++ F D SH I ML+
Sbjct: 415 YANAGRWKDVAKIRNLMAKRRLKKIPGYTWIEVDNIIYRFGAGD-NSHLRSNEIYEMLKS 473
Query: 500 IGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRV 559
+ L AGY PD++ VLHDVDEE K+ L HSEKLA+A+GL+ P+G PIR+ KNLRV
Sbjct: 474 LSQKLESAGYVPDTNSVLHDVDEEVKLGILHAHSEKLAIAFGLIATPDGTPIRITKNLRV 533
Query: 560 CGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
CGDCHS KL+S + R+II+RDANRFHHFK+G+CSC DYW
Sbjct: 534 CGDCHSFCKLVSAITQRDIIVRDANRFHHFKEGICSCGDYW 574
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 130/252 (51%), Gaps = 2/252 (0%)
Query: 158 MKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTL 217
+ ++ +N ++ ++ ++ A ++F++M E+D +WS MI + + G F
Sbjct: 32 IHDLIVANKLLYMCAKHKDLVTAHLLFNKMEERDPVSWSVMIGGFVKNGDYERCFQTFRE 91
Query: 218 MQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGE 277
+ + G + + SL V+ C L GR +H+ +++ +D +V S L+ MY KCG
Sbjct: 92 LIRAGSKPDNFSLPFVIKACRDTMGLIMGRLIHSTVLKNGLHLDNFVCSTLVDMYAKCGM 151
Query: 278 LVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSA 337
+ K +FD KD+V +I+GYA+ G +S +F +M G +PD V +V +++A
Sbjct: 152 IDNAKQLFDRMPKKDLVTRTVMIAGYAECGKPNESWVLFDQMRRDGFVPDKVAMVTIVNA 211
Query: 338 CSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAI 397
C+ G + + R + + + ++ E M+D+ + G ++ + ++ + M + + I
Sbjct: 212 CAKLGAMNKARLVHDYVCARRY-SLDVELGTAMIDMYAKCGSIDSSREIFDRME-QKNVI 269
Query: 398 IWGSLLGACRTH 409
W +++GA H
Sbjct: 270 SWSAMIGAYGYH 281
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 89/352 (25%), Positives = 157/352 (44%), Gaps = 62/352 (17%)
Query: 22 ITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPE------KDVVAQTNMV 75
+ A LF +M E++ VSW+VM+GGF+++ D R F E K V
Sbjct: 51 LVTAHLLFNKMEERDPVSWSVMIGGFVKNG---DYERCFQTFRELIRAGSKPDNFSLPFV 107
Query: 76 LGYCQD------GRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKN 129
+ C+D GR+ + + + N + +T++ Y ID A++LF+ MP+K+
Sbjct: 108 IKACRDTMGLIMGRLIHSTVLKNGLHLDNFVC-STLVDMYAKCGMIDNAKQLFDRMPKKD 166
Query: 130 EVSWTAMLMGYTQCGRIQDAWELFKAM----------PMKSVVAS--------------- 164
V+ T M+ GY +CG+ ++W LF M M ++V +
Sbjct: 167 LVTRTVMIAGYAECGKPNESWVLFDQMRRDGFVPDKVAMVTIVNACAKLGAMNKARLVHD 226
Query: 165 --------------NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELE 210
+MI + G + +R +FD+M +K+ +WS MI Y G E
Sbjct: 227 YVCARRYSLDVELGTAMIDMYAKCGSIDSSREIFDRMEQKNVISWSAMIGAYGYHGQGRE 286
Query: 211 VIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDV--DVYVASVL 268
++LF +M G+ N + IS+L C+ +D G Q+ + L+ + V DV + +
Sbjct: 287 ALELFHMMLNSGIIPNRITFISLLYACSHAGLVDDGLQLFS-LMSVSYGVRPDVKHYTCM 345
Query: 269 ITMYIKCGELVKGKLIFDNF-ASKDIVMWNSIISG---YAQYGLGEKSLKVF 316
+ + + G L + + +N KD +W + + + Q L EK+ K+
Sbjct: 346 VDLLGRAGRLDQALRLIENMEVEKDEGIWCAFLGACRIHRQVDLAEKAAKLL 397
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 85/164 (51%), Gaps = 8/164 (4%)
Query: 230 LISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFA 289
IS L C ++ + +QVHAQ+ D+ VA+ L+ M K +LV L+F+
Sbjct: 6 FISTLFKCRNIFQI---KQVHAQVTTTGIIHDLIVANKLLYMCAKHKDLVTAHLLFNKME 62
Query: 290 SKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGRE 349
+D V W+ +I G+ + G E+ + F E+ +G PD+ +L V+ AC T + GR
Sbjct: 63 ERDPVSWSVMIGGFVKNGDYERCFQTFRELIRAGSKPDNFSLPFVIKACRDTMGLIMGRL 122
Query: 350 IFESMKSKYLVEPKTEHYAC--MVDLLGRAGQVEDAMKLIEAMP 391
I ++ L +++ C +VD+ + G +++A +L + MP
Sbjct: 123 IHSTVLKNGL---HLDNFVCSTLVDMYAKCGMIDNAKQLFDRMP 163
>gi|359476777|ref|XP_002278837.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g23330 [Vitis vinifera]
Length = 1008
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 235/663 (35%), Positives = 370/663 (55%), Gaps = 64/663 (9%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEK----NVVSWTVML---GGFIRDSRI 53
+P+ +V SWT ++ G+ G+ + LF +M ++ N + +++L + DSRI
Sbjct: 347 IPQTDVFSWTVLISGFARIGLSADVLGLFTKMQDQGVCPNQFTLSIVLKSCSSNVNDSRI 406
Query: 54 DD---------------------------------ARRLFDMMPEKDVVAQTNMVLGYCQ 80
A +LF +M EKD V+ M+ Y Q
Sbjct: 407 GKGIHGWILRNGLDLDAVLNNSILDYYVKCRCFGYAEKLFGLMAEKDTVSWNIMMSSYLQ 466
Query: 81 DGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVM----PEKNEVSWTAM 136
G + + ++F ++P K+ SW TMI G + N VA +L M P N+++++
Sbjct: 467 IGDMQKSVDLFRQLPGKDAASWNTMIDGLMRNGCERVALELLYKMVAAGPAFNKLTFSIA 526
Query: 137 LMGYTQCGRI----QDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREK-- 190
L+ + + Q ++ K + NS+I + GE++KA V+F + ++
Sbjct: 527 LVLASSLSVLGLGKQIHTQVLKVGVLDDGFVRNSLIDMYCKCGEMEKASVIFKHLPQESS 586
Query: 191 --------DDA-----TWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVC 237
DDA +WS M+ Y + G + + F+ M V V+ +L SV+S C
Sbjct: 587 MMNSEESCDDAVVESVSWSSMVSGYVQNGRFEDALKTFSFMICSQVEVDKFTLTSVVSAC 646
Query: 238 ASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWN 297
AS L+ GRQVH + + +DV++ S +I MY+KCG L LIF+ +++V+W
Sbjct: 647 ASAGVLELGRQVHGYIQKIGHGLDVFLGSSIIDMYVKCGSLNDAWLIFNQAKDRNVVLWT 706
Query: 298 SIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSK 357
S+ISG A +G G +++++F M + G+ P++V+ VGVL+ACS+ G ++EG + F M+
Sbjct: 707 SMISGCALHGQGREAVRLFELMINEGITPNEVSFVGVLTACSHAGLLEEGCKYFRLMREV 766
Query: 358 YLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEV 417
Y + P EH+ CMVDL GRAG++ + + I + +W S L +CR H +++
Sbjct: 767 YGIRPGAEHFTCMVDLYGRAGRLNEIKEFIHNNAISKLSSVWRSFLSSCRVHKNIEMGIW 826
Query: 418 AAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVH 477
KKLL+LEP +AGPYIL S+I A++ R+ + A++R M++R V K P SWI+++ +VH
Sbjct: 827 VCKKLLELEPFDAGPYILFSSICATEHRWEEAAKIRSLMQQRGVKKNPSQSWIQLKNQVH 886
Query: 478 MFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLA 537
F D SHP+ I L+++ G L+E GY D + V+ DV++E++ L YHSEKLA
Sbjct: 887 SFVMGD-RSHPQDTKIYSYLDELIGRLKEIGYSTDVTPVMQDVEQEQRQVLLGYHSEKLA 945
Query: 538 VAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCR 597
+AYG++ G PIRVMKNLRVC DCH+ IK S+++GREII+RD +RFHHFK G CSC
Sbjct: 946 IAYGIISTAPGTPIRVMKNLRVCIDCHNFIKYASELLGREIIIRDIHRFHHFKHGHCSCA 1005
Query: 598 DYW 600
DYW
Sbjct: 1006 DYW 1008
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 115/424 (27%), Positives = 189/424 (44%), Gaps = 69/424 (16%)
Query: 16 YVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQT--- 72
Y + + +A +F ++P+ +V SWTV++ GF R D LF M ++ V
Sbjct: 331 YAKSQNLEQAHKMFEEIPQTDVFSWTVLISGFARIGLSADVLGLFTKMQDQGVCPNQFTL 390
Query: 73 NMVLGYC----QDGRVDEGRE--IFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMP 126
++VL C D R+ +G I + + +++ YV A KLF +M
Sbjct: 391 SIVLKSCSSNVNDSRIGKGIHGWILRNGLDLDAVLNNSILDYYVKCRCFGYAEKLFGLMA 450
Query: 127 EKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQ 186
EK+ VSW M+ Y Q G +Q + +LF+ +P K + N+MI GL +N
Sbjct: 451 EKDTVSWNIMMSSYLQIGDMQKSVDLFRQLPGKDAASWNTMIDGLMRN------------ 498
Query: 187 MREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHG 246
G E ++L M G N + L + +SL+ L G
Sbjct: 499 -------------------GCERVALELLYKMVAAGPAFNKLTFSIALVLASSLSVLGLG 539
Query: 247 RQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVM----------- 295
+Q+H Q+++ D +V + LI MY KCGE+ K +IF + + +M
Sbjct: 540 KQIHTQVLKVGVLDDGFVRNSLIDMYCKCGEMEKASVIFKHLPQESSMMNSEESCDDAVV 599
Query: 296 ----WNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIF 351
W+S++SGY Q G E +LK F M S V D TL V+SAC+ G ++ GR++
Sbjct: 600 ESVSWSSMVSGYVQNGRFEDALKTFSFMICSQVEVDKFTLTSVVSACASAGVLELGRQVH 659
Query: 352 ESMKSKYLVEPKTEH------YACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
++ K H + ++D+ + G + DA LI + + ++W S++
Sbjct: 660 GYIQ-------KIGHGLDVFLGSSIIDMYVKCGSLNDAW-LIFNQAKDRNVVLWTSMISG 711
Query: 406 CRTH 409
C H
Sbjct: 712 CALH 715
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 86/159 (54%), Gaps = 1/159 (0%)
Query: 162 VASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKE 221
+ N ++ ++ +++A +F+++ + D +W+ +I + R G +V+ LFT MQ +
Sbjct: 322 IRGNHLLNLYAKSQNLEQAHKMFEEIPQTDVFSWTVLISGFARIGLSADVLGLFTKMQDQ 381
Query: 222 GVRVNFPSLISVLSVCASLASLDH-GRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVK 280
GV N +L VL C+S + G+ +H ++R D+D + + ++ Y+KC
Sbjct: 382 GVCPNQFTLSIVLKSCSSNVNDSRIGKGIHGWILRNGLDLDAVLNNSILDYYVKCRCFGY 441
Query: 281 GKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEM 319
+ +F A KD V WN ++S Y Q G +KS+ +F ++
Sbjct: 442 AEKLFGLMAEKDTVSWNIMMSSYLQIGDMQKSVDLFRQL 480
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%)
Query: 268 LITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPD 327
L+ +Y K L + +F+ D+ W +ISG+A+ GL L +F +M GV P+
Sbjct: 327 LLNLYAKSQNLEQAHKMFEEIPQTDVFSWTVLISGFARIGLSADVLGLFTKMQDQGVCPN 386
Query: 328 DVTLVGVLSACS 339
TL VL +CS
Sbjct: 387 QFTLSIVLKSCS 398
>gi|449460189|ref|XP_004147828.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Cucumis sativus]
Length = 759
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 232/610 (38%), Positives = 360/610 (59%), Gaps = 16/610 (2%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
M ER + W +M+ G + G TEA LF MP +N+++WT M+ G+ + ++ ARR F
Sbjct: 156 MAERTLADWNSMISGCWKSGNETEAVVLFNMMPARNIITWTSMVTGYAKMGDLESARRYF 215
Query: 61 DMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVI----SWTTMISGYVNNNRID 116
D MPE+ VV+ M Y Q E +F +M ++ + +W IS +
Sbjct: 216 DEMPERSVVSWNAMQSAYAQKECPKEALNLFHQMLEEGITPDDTTWVVTISSCSSIGDPT 275
Query: 117 VARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAM-PMKSVVASNSMILGL 171
+A + ++ +K N TA+L + + G ++ A +F + ++ V N MI
Sbjct: 276 LADSILRMIDQKHIVLNSFVKTALLDMHAKFGNLEIARNIFDELGSQRNAVTWNIMISAY 335
Query: 172 GQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFT-LMQKEGVRVNFPSL 230
+ G++ AR +FD M ++D +W+ MI Y + G I+LF ++ ++ + ++
Sbjct: 336 TRVGKLSLARELFDNMPKRDVVSWNSMIAGYAQNGESAMSIELFKEMISCMDIQPDEVTI 395
Query: 231 ISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFAS 290
SVLS C + +L V + + + + LI MY KCG + IF +
Sbjct: 396 ASVLSACGHIGALKLSYWVLDIVREKNIKLGISGFNSLIFMYSKCGSVADAHRIFQTMGT 455
Query: 291 KDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREI 350
+D+V +N++ISG+A G G++++K+ M G+ PD VT +GVL+ACS+ G + EG+ +
Sbjct: 456 RDVVSFNTLISGFAANGHGKEAIKLVLTMEEEGIEPDHVTYIGVLTACSHAGLLNEGKNV 515
Query: 351 FESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHM 410
F+S+++ P +HYACMVDLLGRAG++++A LI++MP +P A ++GSLL A R H
Sbjct: 516 FKSIQA-----PTVDHYACMVDLLGRAGELDEAKMLIQSMPMKPHAGVYGSLLNASRIHK 570
Query: 411 KLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWI 470
++ L E+AA KL +LEP+N G Y+LLSNIYAS GR+ DV +R+ M+K + K G SW+
Sbjct: 571 RVGLGELAASKLFELEPQNLGNYVLLSNIYASFGRWEDVKRVREMMKKGGLKKSVGMSWV 630
Query: 471 EVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLR 530
E + +VH FT D SH + I ++L ++ ++ G+ D S L DV+EEEK L
Sbjct: 631 EYKGQVHKFTVGD-RSHEQSKDIYKLLAELERKMKRVGFVADKSCALRDVEEEEKEEMLG 689
Query: 531 YHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFK 590
HSEKLA+ + L+ G IRV+KNLR+C DCH+AIK+ISK+ GREI++RD NRFH F
Sbjct: 690 THSEKLAICFALLISEVGTTIRVVKNLRICLDCHTAIKMISKLEGREIVVRDNNRFHCFS 749
Query: 591 DGLCSCRDYW 600
+G+CSC DYW
Sbjct: 750 EGMCSCHDYW 759
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 89/315 (28%), Positives = 160/315 (50%), Gaps = 34/315 (10%)
Query: 109 YVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMI 168
Y N ++D+AR LFE M E+ W +M+ G + G +A LF MP ++++ SM+
Sbjct: 140 YAKNGQVDLARNLFEQMAERTLADWNSMISGCWKSGNETEAVVLFNMMPARNIITWTSMV 199
Query: 169 LGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFP 228
G + G+++ AR FD+M E+ +W+ M Y +K E ++LF M +EG+ +
Sbjct: 200 TGYAKMGDLESARRYFDEMPERSVVSWNAMQSAYAQKECPKEALNLFHQMLEEGITPDDT 259
Query: 229 SLISVLSVCASL--------------------------ASLD-HGRQVHAQLVRCQFD-- 259
+ + +S C+S+ A LD H + + ++ R FD
Sbjct: 260 TWVVTISSCSSIGDPTLADSILRMIDQKHIVLNSFVKTALLDMHAKFGNLEIARNIFDEL 319
Query: 260 ---VDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVF 316
+ +++I+ Y + G+L + +FDN +D+V WNS+I+GYAQ G S+++F
Sbjct: 320 GSQRNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSMIAGYAQNGESAMSIELF 379
Query: 317 HEMFSS-GVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLG 375
EM S + PD+VT+ VLSAC + G +K + + ++ K ++ + ++ +
Sbjct: 380 KEMISCMDIQPDEVTIASVLSACGHIGALKLSYWVLDIVREKN-IKLGISGFNSLIFMYS 438
Query: 376 RAGQVEDAMKLIEAM 390
+ G V DA ++ + M
Sbjct: 439 KCGSVADAHRIFQTM 453
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 110/251 (43%), Gaps = 40/251 (15%)
Query: 165 NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVR 224
N+++ +NG+V AR +F+QM E+ A W+ MI + G E E + LF +M
Sbjct: 134 NAILDMYAKNGQVDLARNLFEQMAERTLADWNSMISGCWKSGNETEAVVLFNMMPAR--- 190
Query: 225 VNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLI 284
++ + ++T Y K G+L +
Sbjct: 191 ------------------------------------NIITWTSMVTGYAKMGDLESARRY 214
Query: 285 FDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKV 344
FD + +V WN++ S YAQ +++L +FH+M G+ PDD T V +S+CS G
Sbjct: 215 FDEMPERSVVSWNAMQSAYAQKECPKEALNLFHQMLEEGITPDDTTWVVTISSCSSIGDP 274
Query: 345 KEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLG 404
I + K++V A ++D+ + G +E A + + + + +A+ W ++
Sbjct: 275 TLADSILRMIDQKHIVLNSFVKTA-LLDMHAKFGNLEIARNIFDELGSQRNAVTWNIMIS 333
Query: 405 ACRTHMKLDLA 415
A KL LA
Sbjct: 334 AYTRVGKLSLA 344
>gi|449476974|ref|XP_004154891.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Cucumis sativus]
Length = 759
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 232/610 (38%), Positives = 360/610 (59%), Gaps = 16/610 (2%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
M ER + W +M+ G + G TEA LF MP +N+++WT M+ G+ + ++ ARR F
Sbjct: 156 MAERTLADWNSMISGCWKSGNETEAVVLFNMMPARNIITWTSMVTGYAKMGDLESARRYF 215
Query: 61 DMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVI----SWTTMISGYVNNNRID 116
D MPE+ VV+ M Y Q E +F +M ++ + +W IS +
Sbjct: 216 DEMPERSVVSWNAMQSAYAQKECPKEALNLFHQMLEEGITPDDTTWVVTISSCSSIGDPT 275
Query: 117 VARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAM-PMKSVVASNSMILGL 171
+A + ++ +K N TA+L + + G ++ A +F + ++ V N MI
Sbjct: 276 LADSILRMIDQKHIVLNSFVKTALLDMHAKFGNLEIARNIFDELGSQRNAVTWNIMISAY 335
Query: 172 GQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFT-LMQKEGVRVNFPSL 230
+ G++ AR +FD M ++D +W+ MI Y + G I+LF ++ ++ + ++
Sbjct: 336 TRVGKLSLARELFDNMPKRDVVSWNSMIAGYAQNGESAMSIELFKEMISCMDIQPDEVTI 395
Query: 231 ISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFAS 290
SVLS C + +L V + + + + LI MY KCG + IF +
Sbjct: 396 ASVLSACGHIGALKLSYWVLDIVREKNIKLGISGFNSLIFMYSKCGSVADAHRIFQTMGT 455
Query: 291 KDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREI 350
+D+V +N++ISG+A G G++++K+ M G+ PD VT +GVL+ACS+ G + EG+ +
Sbjct: 456 RDVVSFNTLISGFAANGHGKEAIKLVLTMEEEGIEPDHVTYIGVLTACSHAGLLNEGKNV 515
Query: 351 FESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHM 410
F+S+++ P +HYACMVDLLGRAG++++A LI++MP +P A ++GSLL A R H
Sbjct: 516 FKSIQA-----PTVDHYACMVDLLGRAGELDEAKMLIQSMPMKPHAGVYGSLLNASRIHK 570
Query: 411 KLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWI 470
++ L E+AA KL +LEP+N G Y+LLSNIYAS GR+ DV +R+ M+K + K G SW+
Sbjct: 571 RVGLGELAASKLFELEPQNLGNYVLLSNIYASFGRWEDVKRVREMMKKGGLKKSVGMSWV 630
Query: 471 EVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLR 530
E + +VH FT D SH + I ++L ++ ++ G+ D S L DV+EEEK L
Sbjct: 631 EYKGQVHKFTVGD-RSHEQSKDIYKLLAELERKMKRVGFVADKSCALRDVEEEEKEEMLG 689
Query: 531 YHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFK 590
HSEKLA+ + L+ G IRV+KNLR+C DCH+AIK+ISK+ GREI++RD NRFH F
Sbjct: 690 THSEKLAICFALLISEVGTTIRVVKNLRICLDCHTAIKMISKLEGREIVVRDNNRFHCFS 749
Query: 591 DGLCSCRDYW 600
+G+CSC DYW
Sbjct: 750 EGMCSCHDYW 759
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 89/315 (28%), Positives = 160/315 (50%), Gaps = 34/315 (10%)
Query: 109 YVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMI 168
Y N ++D+AR LFE M E+ W +M+ G + G +A LF MP ++++ SM+
Sbjct: 140 YAKNGQVDLARNLFEQMAERTLADWNSMISGCWKSGNETEAVVLFNMMPARNIITWTSMV 199
Query: 169 LGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFP 228
G + G+++ AR FD+M E+ +W+ M Y +K E ++LF M +EG+ +
Sbjct: 200 TGYAKMGDLESARRYFDEMPERSVVSWNAMQSAYAQKECPKEALNLFHQMLEEGITPDDT 259
Query: 229 SLISVLSVCASL--------------------------ASLD-HGRQVHAQLVRCQFD-- 259
+ + +S C+S+ A LD H + + ++ R FD
Sbjct: 260 TWVVTISSCSSIGDPTLADSILRMIDQKHIVLNSFVKTALLDMHAKFGNLEIARNIFDEL 319
Query: 260 ---VDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVF 316
+ +++I+ Y + G+L + +FDN +D+V WNS+I+GYAQ G S+++F
Sbjct: 320 GSQRNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSMIAGYAQNGESAMSIELF 379
Query: 317 HEMFSS-GVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLG 375
EM S + PD+VT+ VLSAC + G +K + + ++ K ++ + ++ +
Sbjct: 380 KEMISCMDIQPDEVTIASVLSACGHIGALKLSYWVLDIVREKN-IKLGISGFNSLIFMYS 438
Query: 376 RAGQVEDAMKLIEAM 390
+ G V DA ++ + M
Sbjct: 439 KCGSVADAHRIFQTM 453
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 110/251 (43%), Gaps = 40/251 (15%)
Query: 165 NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVR 224
N+++ +NG+V AR +F+QM E+ A W+ MI + G E E + LF +M
Sbjct: 134 NAILDMYAKNGQVDLARNLFEQMAERTLADWNSMISGCWKSGNETEAVVLFNMMPAR--- 190
Query: 225 VNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLI 284
++ + ++T Y K G+L +
Sbjct: 191 ------------------------------------NIITWTSMVTGYAKMGDLESARRY 214
Query: 285 FDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKV 344
FD + +V WN++ S YAQ +++L +FH+M G+ PDD T V +S+CS G
Sbjct: 215 FDEMPERSVVSWNAMQSAYAQKECPKEALNLFHQMLEEGITPDDTTWVVTISSCSSIGDP 274
Query: 345 KEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLG 404
I + K++V A ++D+ + G +E A + + + + +A+ W ++
Sbjct: 275 TLADSILRMIDQKHIVLNSFVKTA-LLDMHAKFGNLEIARNIFDELGSQRNAVTWNIMIS 333
Query: 405 ACRTHMKLDLA 415
A KL LA
Sbjct: 334 AYTRVGKLSLA 344
>gi|357143522|ref|XP_003572950.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Brachypodium distachyon]
Length = 874
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 226/636 (35%), Positives = 357/636 (56%), Gaps = 46/636 (7%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF-DMMPEKDV 68
+++ Y + G++ EA +F QM +++VSW ++ G + + +A +LF D
Sbjct: 240 NSLINMYSKCGLVEEAKAVFRQMETRDMVSWNTLMAGLLLNEHQLEALQLFHDSRASMAK 299
Query: 69 VAQ--------------------------------------TNMVLGYCQDGRVDEGREI 90
++Q T ++ Y + G +D+ I
Sbjct: 300 LSQSTYSTVIKLCANLKQLALARQLHSCVLKHGFHSDGNVMTAIMDAYSKCGELDDAFNI 359
Query: 91 FDEMP-KKNVISWTTMISGYVNNNRIDVARKLFEVMPEKN----EVSWTAMLMGYTQCGR 145
F MP +NV+SWT MI G + N I +A LF M E N E +++ +L
Sbjct: 360 FLLMPGSQNVVSWTAMIGGCIQNADIPLAAALFSRMREDNVKPNEFTYSTVLTASIPILL 419
Query: 146 IQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERK 205
Q ++ K + +++ + G ++A +F + KD WS M+ Y +
Sbjct: 420 PQIHAQIIKTNYQHAPSVGTALLASYSKLGNTEEALSIFKMIDHKDVVAWSAMLSCYSQA 479
Query: 206 GYELEVIDLFTLMQKEGVRVNFPSLISVLSVCAS-LASLDHGRQVHAQLVRCQFDVDVYV 264
G ++F M +G++ N ++ S + CAS A +D GRQ HA ++ ++ + V
Sbjct: 480 GDCDGATNVFIKMSMQGMKPNEFTISSAIDACASPTAGIDQGRQFHAISIKYRYQDAICV 539
Query: 265 ASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGV 324
S L+TMY + G + +++F+ +D+V WNS+ISGYAQ+G +++L F +M + G+
Sbjct: 540 GSALVTMYARKGSIDSARIVFERQTDRDLVSWNSMISGYAQHGYSKEALDTFRQMETVGI 599
Query: 325 MPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAM 384
D T + V+ C++ G VKEG++ F+SM + + P EHY+CMVDL RAG++++ M
Sbjct: 600 EMDGATFLAVIVGCTHAGLVKEGQQYFDSMVMDHNISPTMEHYSCMVDLYSRAGKLDETM 659
Query: 385 KLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQG 444
LIE MPF A++W +LLGACR H ++L ++AA+KLL LEP ++ Y+LLSNIYA+ G
Sbjct: 660 NLIEGMPFPAGAMVWRTLLGACRVHKNVELGKLAAQKLLLLEPDDSATYVLLSNIYAAAG 719
Query: 445 RFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLL 504
R+ + E+RK M + V K GCSWI+++ KVH F D SHP I L+ + L
Sbjct: 720 RWKERDEVRKLMDSKKVKKEAGCSWIQIKNKVHSFIACD-KSHPLSEQIYAKLKAMTTRL 778
Query: 505 REAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCH 564
++ GYCP++S VLHD+ EE+K L HSE+LA+A+GL+ P P++++KNLRVCGDCH
Sbjct: 779 KQEGYCPNTSVVLHDIAEEQKETMLVMHSERLALAFGLIATPPRTPLQIVKNLRVCGDCH 838
Query: 565 SAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
+K++S + REII+RD +RFHHF G CSC D+W
Sbjct: 839 MVMKMVSLIEDREIIMRDCSRFHHFNAGACSCGDFW 874
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 165/342 (48%), Gaps = 17/342 (4%)
Query: 72 TNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRI-DVARKLFEVMPE--- 127
T +V Y + G V++GR +F+ MPK+NV++WT++++GYV DV F + E
Sbjct: 139 TALVDMYMKCGGVEDGRVVFEGMPKRNVVTWTSLLTGYVQGRACSDVMALFFRMRAEGVW 198
Query: 128 KNEVSWTAMLMGYTQCGRIQDAWELFKAMPMK-----SVVASNSMILGLGQNGEVQKARV 182
N ++T++L G + D A +K +V NS+I + G V++A+
Sbjct: 199 PNPFTFTSVLSAVASQGAV-DLGRRVHAQSVKFGCRSTVFVCNSLINMYSKCGLVEEAKA 257
Query: 183 VFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLAS 242
VF QM +D +W+ ++ ++LE + LF + +++ + +V+ +CA+L
Sbjct: 258 VFRQMETRDMVSWNTLMAGLLLNEHQLEALQLFHDSRASMAKLSQSTYSTVIKLCANLKQ 317
Query: 243 LDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNF-ASKDIVMWNSIIS 301
L RQ+H+ +++ F D V + ++ Y KCGEL IF S+++V W ++I
Sbjct: 318 LALARQLHSCVLKHGFHSDGNVMTAIMDAYSKCGELDDAFNIFLLMPGSQNVVSWTAMIG 377
Query: 302 GYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVE 361
G Q + +F M V P++ T VL+A + +I +K+ Y
Sbjct: 378 GCIQNADIPLAAALFSRMREDNVKPNEFTYSTVLTASIPILLPQIHAQI---IKTNYQHA 434
Query: 362 PKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
P ++ + G E+A+ + + M D + W ++L
Sbjct: 435 PSVG--TALLASYSKLGNTEEALSIFK-MIDHKDVVAWSAML 473
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 125/241 (51%), Gaps = 1/241 (0%)
Query: 175 GEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVL 234
G V+ RVVF+ M +++ TW+ ++ Y + +V+ LF M+ EGV N + SVL
Sbjct: 149 GGVEDGRVVFEGMPKRNVVTWTSLLTGYVQGRACSDVMALFFRMRAEGVWPNPFTFTSVL 208
Query: 235 SVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIV 294
S AS ++D GR+VHAQ V+ V+V + LI MY KCG + + K +F ++D+V
Sbjct: 209 SAVASQGAVDLGRRVHAQSVKFGCRSTVFVCNSLINMYSKCGLVEEAKAVFRQMETRDMV 268
Query: 295 MWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESM 354
WN++++G ++L++FH+ +S T V+ C+ ++ R++ S
Sbjct: 269 SWNTLMAGLLLNEHQLEALQLFHDSRASMAKLSQSTYSTVIKLCANLKQLALARQL-HSC 327
Query: 355 KSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDL 414
K+ ++D + G+++DA + MP + + W +++G C + + L
Sbjct: 328 VLKHGFHSDGNVMTAIMDAYSKCGELDDAFNIFLLMPGSQNVVSWTAMIGGCIQNADIPL 387
Query: 415 A 415
A
Sbjct: 388 A 388
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 124/267 (46%), Gaps = 10/267 (3%)
Query: 145 RIQDAWELFKAM-PMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKV-- 201
R + A +F ++ P+ ++ ++ + AR D M +D A S V
Sbjct: 12 RGKHAAAVFGSLKPLSALASAARLEDDCADTCNAPGARQALDGMPSRDAAAGSSSNPVAI 71
Query: 202 --YERKGY-ELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQF 258
Y R+G E +D F + + G RV ++ VL VC + G Q+H V+C F
Sbjct: 72 VDYGRRGKGRGEALDHFVDVHRCG-RVQGAAVSRVLKVCGLIPDRVSGEQLHCLCVKCGF 130
Query: 259 D-VDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFH 317
D +V V + L+ MY+KCG + G+++F+ +++V W S+++GY Q + +F
Sbjct: 131 DRAEVGVGTALVDMYMKCGGVEDGRVVFEGMPKRNVVTWTSLLTGYVQGRACSDVMALFF 190
Query: 318 EMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRA 377
M + GV P+ T VLSA + G V GR + + K+ ++++ +
Sbjct: 191 RMRAEGVWPNPFTFTSVLSAVASQGAVDLGRRV-HAQSVKFGCRSTVFVCNSLINMYSKC 249
Query: 378 GQVEDAMKLIEAMPFEPDAIIWGSLLG 404
G VE+A + M D + W +L+
Sbjct: 250 GLVEEAKAVFRQMETR-DMVSWNTLMA 275
>gi|302760085|ref|XP_002963465.1| hypothetical protein SELMODRAFT_79732 [Selaginella moellendorffii]
gi|300168733|gb|EFJ35336.1| hypothetical protein SELMODRAFT_79732 [Selaginella moellendorffii]
Length = 829
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 231/625 (36%), Positives = 364/625 (58%), Gaps = 33/625 (5%)
Query: 4 RNVVSWTAMVRGYVEEGMITEAGTLFWQM----PEKNVVSWTVMLGGFIRDSRIDDARRL 59
RNV+SW+ M + G + EA F M + + +L + + D R +
Sbjct: 210 RNVISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGRLI 269
Query: 60 FDMMP----EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPK--KNVISWTTMISGYVNNN 113
+ E +++ ++ Y + G V+E R++FD M + ++V+SW M+S YV+N+
Sbjct: 270 HSCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSAYVHND 329
Query: 114 RIDVARKLFEVMP-EKNEVSWTAMLMGYTQCGRIQDAW-------ELFKAMPMKSVVASN 165
R A +L++ M ++V++ ++L + C +D ++ K+V+ N
Sbjct: 330 RGKDAIQLYQRMQLRADKVTYVSLL---SACSSAEDVGLGRVLHKQIVNDELEKNVIVGN 386
Query: 166 SMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLM---QKEG 222
+++ + G +AR VFD+M ++ +W+ +I Y R+ E LF M +K G
Sbjct: 387 ALVSMYAKCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQMLELEKNG 446
Query: 223 ----VRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGEL 278
V+ + + +++L+ CA +++L+ G+ V Q C D V + ++ +Y KCGE+
Sbjct: 447 SSQRVKPDALAFVTILNACADVSALEQGKMVSEQAASCGLSSDKAVGTAVVNLYGKCGEI 506
Query: 279 VKGKLIFDNFASK-DIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSA 337
+G+ IFD S+ D+ +WN++I+ YAQ+G ++LK+F M GV PD + V +L A
Sbjct: 507 EEGRRIFDGVCSRPDVQLWNAMIAVYAQFGQSHEALKLFWRMEMEGVRPDSFSFVSILLA 566
Query: 338 CSYTGKVKEGREIFESMKSKYLVEPKT-EHYACMVDLLGRAGQVEDAMKLIEAMPFEPDA 396
CS+TG +G+ F SM ++Y +T +H+ C+ DLLGR G++++A + +E +P +PDA
Sbjct: 567 CSHTGLEDQGKSYFTSMTTEYRNVTRTIQHFGCVADLLGRGGRLKEAEEFLEKLPVKPDA 626
Query: 397 IIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNM 456
+ W SLL ACR H L A+ A KLL+LEP+ A Y+ LSNIYA ++H VA++RK M
Sbjct: 627 VAWTSLLAACRNHRDLKRAKEVANKLLRLEPRCATGYVALSNIYAELQKWHAVAKVRKFM 686
Query: 457 RKRNVIKPPGCSWIEVEKKVHMF-TGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSF 515
++ V K G S IE+ K +H F TG D +HP + I L K+ ++E GY PD+
Sbjct: 687 AEQGVKKERGVSTIEIGKYMHDFATGDD--AHPRNREIREELAKLHSQMKECGYVPDTKM 744
Query: 516 VLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMG 575
VLH VDE+EK L HSE+LA+A GL+ P G P+RV KNLRVC DCH+A KLISK+ G
Sbjct: 745 VLHFVDEQEKERLLFSHSERLAIALGLISTPLGTPLRVTKNLRVCSDCHTATKLISKIAG 804
Query: 576 REIILRDANRFHHFKDGLCSCRDYW 600
R+I++RD RFH FKDG CSC+DYW
Sbjct: 805 RKIVVRDPTRFHLFKDGKCSCQDYW 829
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 107/430 (24%), Positives = 205/430 (47%), Gaps = 30/430 (6%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV----VSWTVMLGGFIRDSRIDDA 56
+ +RN+ SWT +V + G E +M + V V++ LG + D
Sbjct: 105 LEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVTFITALGSCGDPESLRDG 164
Query: 57 RRLFDMMP----EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPK-KNVISWTTMISGYVN 111
R+ M+ E D ++ Y + G + + +F +M + +NVISW+ M +
Sbjct: 165 IRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKMERTRNVISWSIMAGAHAL 224
Query: 112 NNRIDVARKLFEVMPEKN-EVSWTAMLMGYTQCGR---IQDAWELFKAMPMKS----VVA 163
+ + A + F M + + +AM+ + C +QD + + + ++
Sbjct: 225 HGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGRLIHSCIALSGFESELLV 284
Query: 164 SNSMILGLGQNGEVQKARVVFDQMRE--KDDATWSGMIKVYERKGYELEVIDLFTLMQKE 221
+N+++ G+ G V++AR VFD M E +D +W+ M+ Y + I L+ MQ
Sbjct: 285 ANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSAYVHNDRGKDAIQLYQRMQLR 344
Query: 222 GVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKG 281
+V + +S+LS C+S + GR +H Q+V + + +V V + L++MY KCG +
Sbjct: 345 ADKVTY---VSLLSACSSAEDVGLGRVLHKQIVNDELEKNVIVGNALVSMYAKCGSHTEA 401
Query: 282 KLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMF-------SSGVMPDDVTLVGV 334
+ +FD + I+ W +IIS Y + L ++ +F +M S V PD + V +
Sbjct: 402 RAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQMLELEKNGSSQRVKPDALAFVTI 461
Query: 335 LSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEP 394
L+AC+ +++G+ + E S L K A +V+L G+ G++E+ ++ + + P
Sbjct: 462 LNACADVSALEQGKMVSEQAASCGLSSDKAVGTA-VVNLYGKCGEIEEGRRIFDGVCSRP 520
Query: 395 DAIIWGSLLG 404
D +W +++
Sbjct: 521 DVQLWNAMIA 530
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/359 (23%), Positives = 158/359 (44%), Gaps = 55/359 (15%)
Query: 180 ARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCAS 239
A+ FD + +++ +W+G++ + G E + M+++GVR + + I+ L C
Sbjct: 98 AKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVTFITALGSCGD 157
Query: 240 LASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFA-SKDIVMWNS 298
SL G ++H +V + ++D V++ L+ MY KCG L K +F +++++ W+
Sbjct: 158 PESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKMERTRNVISWSI 217
Query: 299 IISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREI-----FES 353
+ +A +G ++L+ F M G+ +V +LSACS V++GR I
Sbjct: 218 MAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGRLIHSCIALSG 277
Query: 354 MKSKYLVEPKTEHYACMVDLLGRAGQVE-------------------------------- 381
+S+ LV ++ + GR G VE
Sbjct: 278 FESELLVAN------AVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSAYVHNDRG 331
Query: 382 -DAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLE-PKNAGPYILLSNI 439
DA++L + M D + + SLL AC + + L V K+++ E KN L ++
Sbjct: 332 KDAIQLYQRMQLRADKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVIVGNALVSM 391
Query: 440 YASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLE 498
YA G + + M +R++I SW + + + R V+ H + +MLE
Sbjct: 392 YAKCGSHTEARAVFDKMEQRSII-----SWTTI---ISAYVRRRLVAEACH-LFQQMLE 441
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 92/406 (22%), Positives = 176/406 (43%), Gaps = 59/406 (14%)
Query: 52 RIDDARRLFDMMPEKDVVAQTNM----VLGYCQDGR-VDEGREIFDEMPKKNV-----IS 101
R D A + D+ EK V N +L C + + EGR+I K N+ I
Sbjct: 24 RSDIASAVLDL--EKQAVRAENATYARLLQRCARAQALPEGRKIHSLAVKHNLLPGNLIL 81
Query: 102 WTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSV 161
++S Y + + A+ F+ + ++N SWT ++ + G+ ++ + M V
Sbjct: 82 GNHIVSMYAHCDSPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGV 141
Query: 162 ---------------------------------------VASNSMILGLGQNGEVQKARV 182
SN+++ + G + A+
Sbjct: 142 RPDAVTFITALGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKR 201
Query: 183 VFDQM-REKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLA 241
VF +M R ++ +WS M + G E + F M G++ +++++LS C+S A
Sbjct: 202 VFAKMERTRNVISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPA 261
Query: 242 SLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNF--ASKDIVMWNSI 299
+ GR +H+ + F+ ++ VA+ ++TMY +CG + + + +FD A +D+V WN +
Sbjct: 262 LVQDGRLIHSCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIM 321
Query: 300 ISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYL 359
+S Y G+ +++++ M + D VT V +LSACS V GR + + + + L
Sbjct: 322 LSAYVHNDRGKDAIQLYQRM---QLRADKVTYVSLLSACSSAEDVGLGRVLHKQIVNDEL 378
Query: 360 VEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
E +V + + G +A + + M + I W +++ A
Sbjct: 379 -EKNVIVGNALVSMYAKCGSHTEARAVFDKME-QRSIISWTTIISA 422
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 92/194 (47%), Gaps = 4/194 (2%)
Query: 218 MQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQF-DVDVYVASVLITMYIKCG 276
++K+ VR + +L CA +L GR++H+ V+ ++ + + +++MY C
Sbjct: 34 LEKQAVRAENATYARLLQRCARAQALPEGRKIHSLAVKHNLLPGNLILGNHIVSMYAHCD 93
Query: 277 ELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLS 336
K FD +++ W +++ +A G +++L+ M GV PD VT + L
Sbjct: 94 SPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVTFITALG 153
Query: 337 ACSYTGKVKEGREIFE-SMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPD 395
+C +++G I + + S+ ++PK + ++++ + G + A ++ M +
Sbjct: 154 SCGDPESLRDGIRIHQMVVDSRLEIDPKVSN--ALLNMYKKCGSLSHAKRVFAKMERTRN 211
Query: 396 AIIWGSLLGACRTH 409
I W + GA H
Sbjct: 212 VISWSIMAGAHALH 225
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 130/278 (46%), Gaps = 27/278 (9%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDM 62
E+NV+ A+V Y + G TEA +F +M +++++SWT ++ ++R + +A LF
Sbjct: 379 EKNVIVGNALVSMYAKCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQ 438
Query: 63 MPEKDVVAQTNMV----------LGYCQD-GRVDEGREIFDEMPKKNVIS----WTTMIS 107
M E + + V L C D +++G+ + ++ + S T +++
Sbjct: 439 MLELEKNGSSQRVKPDALAFVTILNACADVSALEQGKMVSEQAASCGLSSDKAVGTAVVN 498
Query: 108 GYVNNNRIDVARKLFEVMPEKNEVS-WTAMLMGYTQCGRIQDAWELFKAMPMKSVVASN- 165
Y I+ R++F+ + + +V W AM+ Y Q G+ +A +LF M M+ V +
Sbjct: 499 LYGKCGEIEEGRRIFDGVCSRPDVQLWNAMIAVYAQFGQSHEALKLFWRMEMEGVRPDSF 558
Query: 166 ---SMILGLGQNGEVQKARVVFDQM-REKDDATWS----GMIKVYERKGYELEVIDLFTL 217
S++L G + + F M E + T + G + +G L+ + F
Sbjct: 559 SFVSILLACSHTGLEDQGKSYFTSMTTEYRNVTRTIQHFGCVADLLGRGGRLKEAEEF-- 616
Query: 218 MQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVR 255
++K V+ + + S+L+ C + L ++V +L+R
Sbjct: 617 LEKLPVKPDAVAWTSLLAACRNHRDLKRAKEVANKLLR 654
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 98/226 (43%), Gaps = 27/226 (11%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPE-----------KNVVSWTVMLGGFIR 49
M +R+++SWT ++ YV ++ EA LF QM E + +++ +L
Sbjct: 408 MEQRSIISWTTIISAYVRRRLVAEACHLFQQMLELEKNGSSQRVKPDALAFVTILNACAD 467
Query: 50 DSRIDDARRLFDMMP----EKDVVAQTNMVLGYCQDGRVDEGREIFDEM-PKKNVISWTT 104
S ++ + + + D T +V Y + G ++EGR IFD + + +V W
Sbjct: 468 VSALEQGKMVSEQAASCGLSSDKAVGTAVVNLYGKCGEIEEGRRIFDGVCSRPDVQLWNA 527
Query: 105 MISGYVNNNRIDVARKLFEVMP----EKNEVSWTAMLMGYTQCGRIQDAWELFKAMP--- 157
MI+ Y + A KLF M + S+ ++L+ + G F +M
Sbjct: 528 MIAVYAQFGQSHEALKLFWRMEMEGVRPDSFSFVSILLACSHTGLEDQGKSYFTSMTTEY 587
Query: 158 ---MKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDA-TWSGMI 199
+++ + LG+ G +++A +++ K DA W+ ++
Sbjct: 588 RNVTRTIQHFGCVADLLGRGGRLKEAEEFLEKLPVKPDAVAWTSLL 633
>gi|357495039|ref|XP_003617808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519143|gb|AET00767.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 811
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 231/638 (36%), Positives = 356/638 (55%), Gaps = 79/638 (12%)
Query: 41 TVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEM------ 94
T ++ + +D AR +FD + KD+V+ T MV Y ++ +E ++F++M
Sbjct: 175 TALIDAYSVRGNVDVARHVFDDICCKDMVSWTGMVACYAENCFYEESLQLFNQMRIMGYK 234
Query: 95 PKKNVISWT---------------------------------TMISGYVNNNRIDVARKL 121
P IS ++ Y + I A++L
Sbjct: 235 PNNFTISGALKSCLGLEAFNVGKSVHGCALKGCYDHDLFVGIALLELYAKSGEIIDAQRL 294
Query: 122 FEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASN---------------- 165
FE MP+ + + W+ M+ Y Q R ++A +LF M SVV +N
Sbjct: 295 FEEMPKTDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQACASSVSL 354
Query: 166 -------SMILGLGQN----------------GEVQKARVVFDQMREKDDATWSGMIKVY 202
S +L G N GE++ + +F+++ +++D TW+ +I Y
Sbjct: 355 DLGKQIHSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRNDVTWNTIIVGY 414
Query: 203 ERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDV 262
+ G ++LFT M + ++ + SVL ASLA+L+ G Q+H+ ++ ++ D
Sbjct: 415 VQLGDGERAMNLFTHMLEHDMQPTEVTYSSVLRASASLAALEPGLQIHSLTIKTMYNKDT 474
Query: 263 YVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSS 322
VA+ LI MY KCG + +L FD +D V WN++I GY+ +G+ ++L +F M +
Sbjct: 475 VVANSLIDMYAKCGRINDARLTFDKMNKRDEVSWNAMICGYSMHGMSMEALNLFDMMQHT 534
Query: 323 GVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVED 382
P+ +T VGVLSACS G + +G+ FESM Y ++P EHY CMV LLGR G+ ++
Sbjct: 535 DCKPNKLTFVGVLSACSNAGLLYKGQAHFESMSKDYDIKPCIEHYTCMVWLLGRLGRFDE 594
Query: 383 AMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYAS 442
AMKLI + ++P ++W +LLGAC H K+DL V A+ +L++EP + ++LLSN+YA+
Sbjct: 595 AMKLIGEIAYQPSVMVWRALLGACVIHKKVDLGRVCAQHVLEMEPHDDATHVLLSNMYAT 654
Query: 443 QGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGG 502
GR+ +VA +RK M+K+ V K PG SW+E + VH F+ D SHP+ +I MLE +
Sbjct: 655 AGRWDNVAFVRKYMQKKKVRKEPGLSWVENQGVVHYFSVGD-TSHPDIKLICAMLEWLNK 713
Query: 503 LLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGD 562
R+AGY PD + VL DV ++EK L HSE+LA+AYGL++ P IR++KNLR+C D
Sbjct: 714 KTRDAGYVPDCNAVLLDVQDDEKERHLWVHSERLALAYGLIRTPLSCSIRIIKNLRICID 773
Query: 563 CHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
CH+ +KLISKV+ REI++RD NRFHHF+ G+CSC DYW
Sbjct: 774 CHTVMKLISKVVQREIVIRDINRFHHFRHGVCSCGDYW 811
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 113/438 (25%), Positives = 206/438 (47%), Gaps = 44/438 (10%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEA----GTLFWQMPEKNVVSWTVMLGGFIRDSRIDDA 56
MP+ N +S+ + +GY + +A +F + E N +T +L + +D A
Sbjct: 96 MPQTNTISFVTLAQGYSRDHQFHQALHFILRIFKEGHEVNPFVFTTLLKLLV---SMDLA 152
Query: 57 RR-------LFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGY 109
++ + D T ++ Y G VD R +FD++ K+++SWT M++ Y
Sbjct: 153 HLCWTLHACVYKLGHHADAFVGTALIDAYSVRGNVDVARHVFDDICCKDMVSWTGMVACY 212
Query: 110 VNNNRIDVARKLFEVMPEKNEVSWTAMLMGY-----TQCGRIQDAWELFKAMPMKSV--- 161
N + + +LF M +MGY T G ++ L KSV
Sbjct: 213 AENCFYEESLQLFNQMR----------IMGYKPNNFTISGALKSCLGLEAFNVGKSVHGC 262
Query: 162 ----VASNSMILGL------GQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEV 211
+ + +G+ ++GE+ A+ +F++M + D WS MI Y + E
Sbjct: 263 ALKGCYDHDLFVGIALLELYAKSGEIIDAQRLFEEMPKTDLIPWSLMIARYAQSDRSKEA 322
Query: 212 IDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITM 271
+DLF M++ V N + SVL CAS SLD G+Q+H+ +++ + +V+V++ ++ +
Sbjct: 323 LDLFLRMRQTSVVPNNFTFASVLQACASSVSLDLGKQIHSCVLKFGLNSNVFVSNAIMDV 382
Query: 272 YIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTL 331
Y KCGE+ +F+ ++ V WN+II GY Q G GE+++ +F M + P +VT
Sbjct: 383 YAKCGEIENSMKLFEELPDRNDVTWNTIIVGYVQLGDGERAMNLFTHMLEHDMQPTEVTY 442
Query: 332 VGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMP 391
VL A + ++ G +I S+ K + T ++D+ + G++ DA + M
Sbjct: 443 SSVLRASASLAALEPGLQI-HSLTIKTMYNKDTVVANSLIDMYAKCGRINDARLTFDKMN 501
Query: 392 FEPDAIIWGSLLGACRTH 409
+ D + W +++ H
Sbjct: 502 -KRDEVSWNAMICGYSMH 518
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 90/345 (26%), Positives = 169/345 (48%), Gaps = 10/345 (2%)
Query: 67 DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVAR----KLF 122
D+ AQ ++ Y Q + + ++FDEMP+ N IS+ T+ GY +++ A ++F
Sbjct: 69 DLFAQNILLNFYVQSNSLQDASKLFDEMPQTNTISFVTLAQGYSRDHQFHQALHFILRIF 128
Query: 123 EVMPEKNEVSWTAMLMGYTQCGRIQDAWEL----FKAMPMKSVVASNSMILGLGQNGEVQ 178
+ E N +T +L W L +K ++I G V
Sbjct: 129 KEGHEVNPFVFTTLLKLLVSMDLAHLCWTLHACVYKLGHHADAFVGTALIDAYSVRGNVD 188
Query: 179 KARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCA 238
AR VFD + KD +W+GM+ Y + E + LF M+ G + N ++ L C
Sbjct: 189 VARHVFDDICCKDMVSWTGMVACYAENCFYEESLQLFNQMRIMGYKPNNFTISGALKSCL 248
Query: 239 SLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNS 298
L + + G+ VH ++ +D D++V L+ +Y K GE++ + +F+ D++ W+
Sbjct: 249 GLEAFNVGKSVHGCALKGCYDHDLFVGIALLELYAKSGEIIDAQRLFEEMPKTDLIPWSL 308
Query: 299 IISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKY 358
+I+ YAQ +++L +F M + V+P++ T VL AC+ + + G++I S K+
Sbjct: 309 MIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQACASSVSLDLGKQI-HSCVLKF 367
Query: 359 LVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
+ ++D+ + G++E++MKL E +P D + W +++
Sbjct: 368 GLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRND-VTWNTII 411
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 136/297 (45%), Gaps = 48/297 (16%)
Query: 11 AMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVA 70
A++ Y + G I +A LF +MP+ +++ W++M+ + + R +A LF M + VV
Sbjct: 277 ALLELYAKSGEIIDAQRLFEEMPKTDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVP 336
Query: 71 QT---NMVLGYCQDG-RVDEGREIFDEMPK----KNVISWTTMISGYVNNNRIDVARKLF 122
VL C +D G++I + K NV ++ Y I+ + KLF
Sbjct: 337 NNFTFASVLQACASSVSLDLGKQIHSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLF 396
Query: 123 EVMPEKNEVSWTAMLMGYTQCGRIQDAWELF----------------------------- 153
E +P++N+V+W +++GY Q G + A LF
Sbjct: 397 EELPDRNDVTWNTIIVGYVQLGDGERAMNLFTHMLEHDMQPTEVTYSSVLRASASLAALE 456
Query: 154 ----------KAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYE 203
K M K V +NS+I + G + AR+ FD+M ++D+ +W+ MI Y
Sbjct: 457 PGLQIHSLTIKTMYNKDTVVANSLIDMYAKCGRINDARLTFDKMNKRDEVSWNAMICGYS 516
Query: 204 RKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDV 260
G +E ++LF +MQ + N + + VLS C++ A L + Q H + + +D+
Sbjct: 517 MHGMSMEALNLFDMMQHTDCKPNKLTFVGVLSACSN-AGLLYKGQAHFESMSKDYDI 572
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 93/200 (46%), Gaps = 12/200 (6%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMP 64
NV A++ Y + G I + LF ++P++N V+W ++ G+++ + A LF M
Sbjct: 372 NVFVSNAIMDVYAKCGEIENSMKLFEELPDRNDVTWNTIIVGYVQLGDGERAMNLFTHML 431
Query: 65 EKDV----VAQTNMVLGYCQDGRVDEGREI----FDEMPKKNVISWTTMISGYVNNNRID 116
E D+ V ++++ ++ G +I M K+ + ++I Y RI+
Sbjct: 432 EHDMQPTEVTYSSVLRASASLAALEPGLQIHSLTIKTMYNKDTVVANSLIDMYAKCGRIN 491
Query: 117 VARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGL----G 172
AR F+ M +++EVSW AM+ GY+ G +A LF M + +G+
Sbjct: 492 DARLTFDKMNKRDEVSWNAMICGYSMHGMSMEALNLFDMMQHTDCKPNKLTFVGVLSACS 551
Query: 173 QNGEVQKARVVFDQMREKDD 192
G + K + F+ M + D
Sbjct: 552 NAGLLYKGQAHFESMSKDYD 571
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 81/168 (48%), Gaps = 12/168 (7%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSR----IDDA 56
+P+RN V+W ++ GYV+ G A LF M E ++ V +R S ++
Sbjct: 399 LPDRNDVTWNTIIVGYVQLGDGERAMNLFTHMLEHDMQPTEVTYSSVLRASASLAALEPG 458
Query: 57 RRLFDM----MPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
++ + M KD V +++ Y + GR+++ R FD+M K++ +SW MI GY +
Sbjct: 459 LQIHSLTIKTMYNKDTVVANSLIDMYAKCGRINDARLTFDKMNKRDEVSWNAMICGYSMH 518
Query: 113 NRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAM 156
A LF++M N++++ +L + G + F++M
Sbjct: 519 GMSMEALNLFDMMQHTDCKPNKLTFVGVLSACSNAGLLYKGQAHFESM 566
>gi|449462994|ref|XP_004149219.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
gi|449500964|ref|XP_004161240.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 624
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 209/544 (38%), Positives = 337/544 (61%), Gaps = 11/544 (2%)
Query: 66 KDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRID----VARKL 121
+++ ++ Y + G +++ +E+FD M K++ SW+ ++ GY + R+L
Sbjct: 83 RNLAVANKLLYMYVERGALEDAQELFDGMSKRHPYSWSVIVGGYAKVGNFFSCFWMFREL 142
Query: 122 FEVMPEKNEVSWTAML-----MGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGE 176
++ S ++ + +CGR+ L + V + +++ +
Sbjct: 143 LRSGAPLDDYSAPVVIRACRDLKDLKCGRLIHCITLKCGLDYGHFVCA-TLVDMYARCKV 201
Query: 177 VQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSV 236
V+ A +F +M ++D ATW+ MI G +E + F M+ +G+ + +L++V+
Sbjct: 202 VEDAHQIFVKMWKRDLATWTVMIGALAESGVPVESLVFFDRMRNQGIVPDKVALVTVVYA 261
Query: 237 CASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMW 296
CA L +++ + +HA + + +DV + + +I MY KCG + + IFD ++++ W
Sbjct: 262 CAKLGAMNKAKAIHAYINGTGYSLDVILGTAMIDMYAKCGSVESARWIFDRMQVRNVITW 321
Query: 297 NSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKS 356
+++I+ Y +G GEK+L++F M SG++P+ +T V +L ACS+ G ++EG+ F SM
Sbjct: 322 SAMIAAYGYHGQGEKALELFPMMLRSGILPNRITFVSLLYACSHAGLIEEGQRFFSSMWD 381
Query: 357 KYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAE 416
+Y V P +HY CMVDLLGRAG++++A+++IE MP E D ++WG+LLGACR H LDLAE
Sbjct: 382 EYGVTPDVKHYTCMVDLLGRAGRLDEALEMIEGMPVEKDEVLWGALLGACRIHRHLDLAE 441
Query: 417 VAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKV 476
A+ LL+L+ + G Y+LLSNIYA+ G++ D+A+ R M K + K PG +WIEV +K+
Sbjct: 442 RVARSLLKLQSQKPGHYVLLSNIYANAGKWEDMAKTRDLMTKGGLRKIPGRTWIEVGEKL 501
Query: 477 HMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKL 536
+ F D +HP I +ML+++G L AGY PD++ VL+DVDEE K L HSEKL
Sbjct: 502 YQFGVGD-KTHPRSNEIYKMLKRLGEKLEVAGYHPDTNDVLYDVDEEVKQGLLYSHSEKL 560
Query: 537 AVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSC 596
A+A+GL+ LP+G PIR+ KNLRVCGDCH+ K +S + + II+RDA RFHHFK+G+CSC
Sbjct: 561 AIAFGLLVLPQGHPIRITKNLRVCGDCHTFCKFVSLIEQKTIIVRDAKRFHHFKEGVCSC 620
Query: 597 RDYW 600
RDYW
Sbjct: 621 RDYW 624
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 73/351 (20%), Positives = 151/351 (43%), Gaps = 55/351 (15%)
Query: 4 RNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMM 63
RN+ ++ YVE G + +A LF M +++ SW+V++GG+ + +F +
Sbjct: 83 RNLAVANKLLYMYVERGALEDAQELFDGMSKRHPYSWSVIVGGYAKVGNFFSCFWMFREL 142
Query: 64 -----PEKDVVAQTNMVLGYCQD------GR----------------------------- 83
P D A +V+ C+D GR
Sbjct: 143 LRSGAPLDDYSAP--VVIRACRDLKDLKCGRLIHCITLKCGLDYGHFVCATLVDMYARCK 200
Query: 84 -VDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEK----NEVSWTAMLM 138
V++ +IF +M K+++ +WT MI + + F+ M + ++V+ ++
Sbjct: 201 VVEDAHQIFVKMWKRDLATWTVMIGALAESGVPVESLVFFDRMRNQGIVPDKVALVTVVY 260
Query: 139 GYTQCGRIQDAWELFKAMPMKS----VVASNSMILGLGQNGEVQKARVVFDQMREKDDAT 194
+ G + A + + V+ +MI + G V+ AR +FD+M+ ++ T
Sbjct: 261 ACAKLGAMNKAKAIHAYINGTGYSLDVILGTAMIDMYAKCGSVESARWIFDRMQVRNVIT 320
Query: 195 WSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLV 254
WS MI Y G + ++LF +M + G+ N + +S+L C+ ++ G++ + +
Sbjct: 321 WSAMIAAYGYHGQGEKALELFPMMLRSGILPNRITFVSLLYACSHAGLIEEGQRFFSSMW 380
Query: 255 RCQFDV--DVYVASVLITMYIKCGELVKGKLIFDNF-ASKDIVMWNSIISG 302
++ V DV + ++ + + G L + + + KD V+W +++
Sbjct: 381 D-EYGVTPDVKHYTCMVDLLGRAGRLDEALEMIEGMPVEKDEVLWGALLGA 430
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 102/217 (47%), Gaps = 18/217 (8%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFI----RDSRIDDA 56
M +R++ +WT M+ E G+ E+ F +M + +V V L + + ++ A
Sbjct: 212 MWKRDLATWTVMIGALAESGVPVESLVFFDRMRNQGIVPDKVALVTVVYACAKLGAMNKA 271
Query: 57 RRLFDMMPEK----DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+ + + DV+ T M+ Y + G V+ R IFD M +NVI+W+ MI+ Y +
Sbjct: 272 KAIHAYINGTGYSLDVILGTAMIDMYAKCGSVESARWIFDRMQVRNVITWSAMIAAYGYH 331
Query: 113 NRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAM-----PMKSVVA 163
+ + A +LF +M N +++ ++L + G I++ F +M V
Sbjct: 332 GQGEKALELFPMMLRSGILPNRITFVSLLYACSHAGLIEEGQRFFSSMWDEYGVTPDVKH 391
Query: 164 SNSMILGLGQNGEVQKARVVFDQMR-EKDDATWSGMI 199
M+ LG+ G + +A + + M EKD+ W ++
Sbjct: 392 YTCMVDLLGRAGRLDEALEMIEGMPVEKDEVLWGALL 428
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 83/169 (49%), Gaps = 6/169 (3%)
Query: 239 SLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNS 298
S +L RQVHAQ+ ++ VA+ L+ MY++ G L + +FD + + W+
Sbjct: 62 SCRNLFQVRQVHAQIATNGAFRNLAVANKLLYMYVERGALEDAQELFDGMSKRHPYSWSV 121
Query: 299 IISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKY 358
I+ GYA+ G +F E+ SG DD + V+ AC +K GR + + K
Sbjct: 122 IVGGYAKVGNFFSCFWMFRELLRSGAPLDDYSAPVVIRACRDLKDLKCGR-LIHCITLKC 180
Query: 359 LVEPKTEHYAC--MVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
++ H+ C +VD+ R VEDA ++ M ++ D W ++GA
Sbjct: 181 GLD--YGHFVCATLVDMYARCKVVEDAHQIFVKM-WKRDLATWTVMIGA 226
>gi|225449798|ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 849
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 229/616 (37%), Positives = 350/616 (56%), Gaps = 18/616 (2%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEK----NVVSWTVMLGGF--IRDSRID 54
MPER++V W ++ GY + G A L +M E+ + ++ +L + RI
Sbjct: 236 MPERDLVCWNTIISGYAQNGFGKTALELVLRMQEEGKRPDSITIVSILPAVADVGSLRIG 295
Query: 55 DARRLFDMMP--EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+ + M E V T +V Y + G V R IFD M K V+SW +MI GYV N
Sbjct: 296 RSIHGYSMRAGFESFVNVSTALVDMYSKCGSVGTARLIFDRMTGKTVVSWNSMIDGYVQN 355
Query: 113 NRIDVARKLFE-VMPEKNEVSWTAMLMGYTQCGRIQDAWE------LFKAMPMKSVVAS- 164
A ++F+ +M E+ E++ ++ C + D + L + + S V+
Sbjct: 356 GDPGAAMEIFQKMMDEQVEMTNVTVMGALHACADLGDVEQGRFVHKLLDQLELGSDVSVM 415
Query: 165 NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVR 224
NS+I + V A +F+ ++ K +W+ MI Y + G E ID F MQ + ++
Sbjct: 416 NSLISMYSKCKRVDIAAEIFENLQHKTLVSWNAMILGYAQNGRINEAIDYFCKMQLQNIK 475
Query: 225 VNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLI 284
+ +++SV+ A L+ L + +H ++R D +V+VA+ L+ MY KCG + + +
Sbjct: 476 PDSFTMVSVIPALAELSVLPQAKWIHGLVIRTCLDKNVFVATALVDMYAKCGAVHTARKL 535
Query: 285 FDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKV 344
FD + + WN++I GY +GLG+ +L++F +M + P++VT + VLSACS++G V
Sbjct: 536 FDMMDERHVTTWNAMIDGYGTHGLGKAALELFEKMKKEVIKPNEVTFLCVLSACSHSGLV 595
Query: 345 KEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLG 404
+EG + F SMK Y +EP +HY MVDLLGRA ++ +A I+ MP EP ++G++LG
Sbjct: 596 EEGFQYFGSMKKDYGLEPAMDHYGAMVDLLGRANRLNEAWDFIQKMPIEPAISVFGAMLG 655
Query: 405 ACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKP 464
ACR H ++L E AA ++ L+P + G ++LL+NIYA+ + VA +R M K+ + K
Sbjct: 656 ACRIHKNVELGEKAANRIFDLDPDDGGYHVLLANIYATASMWDKVARVRTTMEKKGIQKT 715
Query: 465 PGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEE 524
PG S +E++ +VH F SHP+ I LE +G ++ AGY PD++ V HDV++
Sbjct: 716 PGWSVVELQNEVHTFYS-GTTSHPQAKKIYAFLETLGNRIKAAGYMPDTNSV-HDVEDVV 773
Query: 525 KVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDAN 584
K L HSEKLA+A+ L+ G I + KNLRVCGDCH+A K IS V REII+RD
Sbjct: 774 KEQLLNSHSEKLAIAFSLLNTSPGTTIHLRKNLRVCGDCHNATKYISLVTKREIIVRDMR 833
Query: 585 RFHHFKDGLCSCRDYW 600
RFHHFKDG CSC DYW
Sbjct: 834 RFHHFKDGTCSCGDYW 849
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 120/467 (25%), Positives = 211/467 (45%), Gaps = 55/467 (11%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF--------- 60
T +V + + G + EA +F + +K + ML G+ R+S +DDA F
Sbjct: 113 TKLVSLFCKFGSLHEAARVFQPIEDKIDELYHTMLKGYARNSSLDDAVSFFCRMRYDGVR 172
Query: 61 -----------------DMMPEK-------------DVVAQTNMVLGYCQDGRVDEGREI 90
D+ K +V A T +V Y + V+E ++
Sbjct: 173 PVVYNFTYLLKVCGDNADLRKGKEIHCQLIVNGFASNVFAMTGVVNMYAKCRLVEEAYKM 232
Query: 91 FDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEK----NEVSWTAML-----MGYT 141
FD MP+++++ W T+ISGY N A +L M E+ + ++ ++L +G
Sbjct: 233 FDRMPERDLVCWNTIISGYAQNGFGKTALELVLRMQEEGKRPDSITIVSILPAVADVGSL 292
Query: 142 QCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKV 201
+ GR + + +A V S +++ + G V AR++FD+M K +W+ MI
Sbjct: 293 RIGRSIHGYSM-RAGFESFVNVSTALVDMYSKCGSVGTARLIFDRMTGKTVVSWNSMIDG 351
Query: 202 YERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVD 261
Y + G +++F M E V + +++ L CA L ++ GR VH L + + D
Sbjct: 352 YVQNGDPGAAMEIFQKMMDEQVEMTNVTVMGALHACADLGDVEQGRFVHKLLDQLELGSD 411
Query: 262 VYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFS 321
V V + LI+MY KC + IF+N K +V WN++I GYAQ G +++ F +M
Sbjct: 412 VSVMNSLISMYSKCKRVDIAAEIFENLQHKTLVSWNAMILGYAQNGRINEAIDYFCKMQL 471
Query: 322 SGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVE 381
+ PD T+V V+ A + + + + I + + ++ +VD+ + G V
Sbjct: 472 QNIKPDSFTMVSVIPALAELSVLPQAKWI-HGLVIRTCLDKNVFVATALVDMYAKCGAVH 530
Query: 382 DAMKLIEAMPFEPDAIIWGSLLGACRTH----MKLDLAEVAAKKLLQ 424
A KL + M E W +++ TH L+L E K++++
Sbjct: 531 TARKLFDMMD-ERHVTTWNAMIDGYGTHGLGKAALELFEKMKKEVIK 576
>gi|224091072|ref|XP_002309169.1| predicted protein [Populus trichocarpa]
gi|222855145|gb|EEE92692.1| predicted protein [Populus trichocarpa]
Length = 619
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 228/586 (38%), Positives = 337/586 (57%), Gaps = 43/586 (7%)
Query: 28 LFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQT---NMVLGYCQ---D 81
+F Q E N+ + M+ G + + ++ ++ M ++ + + +L C D
Sbjct: 64 IFHQTKEPNIFLFNTMIHGLVLNDSFQESIEIYHSMRKEGLSPDSFTFPFLLKACARLLD 123
Query: 82 GRVDEGREIFDEMPK----KNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAML 137
++ G ++ + K + T+++S Y ID A K+F+ +PEKN +WTA++
Sbjct: 124 SKL--GIKLHGLVVKAGCESDAFVNTSLVSLYGKCGFIDNAFKVFDDIPEKNVAAWTAII 181
Query: 138 MGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSG 197
GY G+ ++A ++F+ +A VFD M EKD +WS
Sbjct: 182 SGYIGVGKCREAIDMFR------------------------RACSVFDGMLEKDIVSWSS 217
Query: 198 MIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQ 257
MI+ Y G E +DLF M EG R + +++ VL CA L +L+ G + R +
Sbjct: 218 MIQGYASNGLPKEALDLFFKMLNEGFRPDCYAMVGVLCACARLGALELGNWASNLMDRNE 277
Query: 258 FDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFH 317
F + + + LI MY KCG + +F KDIV+WN+ ISG A G + + +F
Sbjct: 278 FLGNPVLGTALIDMYAKCGRMDSAWEVFRGMRKKDIVVWNAAISGLAMSGHVKAAFGLFG 337
Query: 318 EMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRA 377
+M SG+ PD T VG+L AC++ G V EGR+ F SM+ + + P+ EHY CMVDLLGRA
Sbjct: 338 QMEKSGIEPDGNTFVGLLCACTHAGLVDEGRQYFNSMERVFTLTPEIEHYGCMVDLLGRA 397
Query: 378 GQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLS 437
G +++A +L+++MP E +AI+WG+LLG CR H L E K+L+ LEP N+G Y+LLS
Sbjct: 398 GFLDEAHQLVKSMPMEANAIVWGALLGGCRLHRDTQLVEGVLKQLIALEPSNSGNYVLLS 457
Query: 438 NIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRML 497
NIY++ ++ D A++R M +R + K PG SWIEV+ VH F V HP+ ++
Sbjct: 458 NIYSASHKWEDAAKIRSIMSERGIKKVPGYSWIEVDGVVHEFL----VGDTSHPLSEKIY 513
Query: 498 EKIGGL---LREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVM 554
K+G L L+ +GY P + +VL D++EEEK H + HSEKLA+A+GL+ IRV+
Sbjct: 514 AKLGELVKDLKASGYVPTTDYVLFDIEEEEKEHFIGCHSEKLAIAFGLISTAPNDKIRVV 573
Query: 555 KNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
KNLRVCGDCH AIK IS+ GREII+RD NRFH F DG CSC+DYW
Sbjct: 574 KNLRVCGDCHEAIKHISRFTGREIIVRDNNRFHCFNDGSCSCKDYW 619
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 113/230 (49%), Gaps = 19/230 (8%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSR----IDDARR---LFDM 62
T++V Y + G I A +F +PEKNV +WT ++ G+I + ID RR +FD
Sbjct: 147 TSLVSLYGKCGFIDNAFKVFDDIPEKNVAAWTAIISGYIGVGKCREAIDMFRRACSVFDG 206
Query: 63 MPEKDVVAQTNMVLGYCQDGRVDEGREIF----DEMPKKNVISWTTMISGYVNNNRIDVA 118
M EKD+V+ ++M+ GY +G E ++F +E + + + ++ +++
Sbjct: 207 MLEKDIVSWSSMIQGYASNGLPKEALDLFFKMLNEGFRPDCYAMVGVLCACARLGALELG 266
Query: 119 RKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQN 174
+M N V TA++ Y +CGR+ AWE+F+ M K +V N+ I GL +
Sbjct: 267 NWASNLMDRNEFLGNPVLGTALIDMYAKCGRMDSAWEVFRGMRKKDIVVWNAAISGLAMS 326
Query: 175 GEVQKARVVFDQMR----EKDDATWSGMIKVYERKGYELEVIDLFTLMQK 220
G V+ A +F QM E D T+ G++ G E F M++
Sbjct: 327 GHVKAAFGLFGQMEKSGIEPDGNTFVGLLCACTHAGLVDEGRQYFNSMER 376
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 137/298 (45%), Gaps = 21/298 (7%)
Query: 144 GRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREK----DDATWSGMI 199
G + +F ++ N+MI GL N Q++ ++ MR++ D T+ ++
Sbjct: 56 GNTNYSHRIFHQTKEPNIFLFNTMIHGLVLNDSFQESIEIYHSMRKEGLSPDSFTFPFLL 115
Query: 200 KVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFD 259
K R I L L+ K G + S++S+ +D+ +V + +
Sbjct: 116 KACARLLDSKLGIKLHGLVVKAGCESDAFVNTSLVSLYGKCGFIDNAFKVFDDIP----E 171
Query: 260 VDVYVASVLITMYI---KCGELV----KGKLIFDNFASKDIVMWNSIISGYAQYGLGEKS 312
+V + +I+ YI KC E + + +FD KDIV W+S+I GYA GL +++
Sbjct: 172 KNVAAWTAIISGYIGVGKCREAIDMFRRACSVFDGMLEKDIVSWSSMIQGYASNGLPKEA 231
Query: 313 LKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESM-KSKYLVEPKTEHYACMV 371
L +F +M + G PD +VGVL AC+ G ++ G M ++++L P ++
Sbjct: 232 LDLFFKMLNEGFRPDCYAMVGVLCACARLGALELGNWASNLMDRNEFLGNPVLG--TALI 289
Query: 372 DLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLG--ACRTHMKLDLAEVAAKKLLQLEP 427
D+ + G+++ A ++ M + D ++W + + A H+K + +EP
Sbjct: 290 DMYAKCGRMDSAWEVFRGMR-KKDIVVWNAAISGLAMSGHVKAAFGLFGQMEKSGIEP 346
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 112/255 (43%), Gaps = 24/255 (9%)
Query: 1 MPERNVVSWTAMVRGYVEEG-------MITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRI 53
+PE+NV +WTA++ GY+ G M A ++F M EK++VSW+ M+ G+ +
Sbjct: 169 IPEKNVAAWTAIISGYIGVGKCREAIDMFRRACSVFDGMLEKDIVSWSSMIQGYASNGLP 228
Query: 54 DDARRLFDMMPEK----DVVAQTNMVLGYCQDGRVDEGREIFDEMPKK----NVISWTTM 105
+A LF M + D A ++ + G ++ G + M + N + T +
Sbjct: 229 KEALDLFFKMLNEGFRPDCYAMVGVLCACARLGALELGNWASNLMDRNEFLGNPVLGTAL 288
Query: 106 ISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASN 165
I Y R+D A ++F M +K+ V W A + G G ++ A+ LF M +
Sbjct: 289 IDMYAKCGRMDSAWEVFRGMRKKDIVVWNAAISGLAMSGHVKAAFGLFGQMEKSGIEPDG 348
Query: 166 SMILGL----GQNGEVQKARVVFDQMREKDDAT-----WSGMIKVYERKGYELEVIDLFT 216
+ +GL G V + R F+ M T + M+ + R G+ E L
Sbjct: 349 NTFVGLLCACTHAGLVDEGRQYFNSMERVFTLTPEIEHYGCMVDLLGRAGFLDEAHQLVK 408
Query: 217 LMQKEGVRVNFPSLI 231
M E + + +L+
Sbjct: 409 SMPMEANAIVWGALL 423
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 79/172 (45%), Gaps = 8/172 (4%)
Query: 242 SLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIIS 301
SL H + VHA L+R D D Y+ + ++ G IF +I ++N++I
Sbjct: 22 SLKHLKHVHAALLRLGLDEDSYLLNKVLRFSFNFGNTNYSHRIFHQTKEPNIFLFNTMIH 81
Query: 302 GYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVE 361
G ++S++++H M G+ PD T +L AC+ K G ++ + K E
Sbjct: 82 GLVLNDSFQESIEIYHSMRKEGLSPDSFTFPFLLKACARLLDSKLGIKL-HGLVVKAGCE 140
Query: 362 PKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL------GACR 407
+V L G+ G +++A K+ + +P E + W +++ G CR
Sbjct: 141 SDAFVNTSLVSLYGKCGFIDNAFKVFDDIP-EKNVAAWTAIISGYIGVGKCR 191
>gi|125557011|gb|EAZ02547.1| hypothetical protein OsI_24658 [Oryza sativa Indica Group]
Length = 635
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 220/560 (39%), Positives = 325/560 (58%), Gaps = 7/560 (1%)
Query: 47 FIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWT-TM 105
+ R+D L + P+ V T+ + + G + EM + +I + T+
Sbjct: 77 YAASDRLDLTVTLLRLTPDPTTVFYTSAIHAHSSRGLHLAALALLSEMLGRGLIPTSHTL 136
Query: 106 ISGYVNNNRIDVARKL----FEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSV 161
S + + + R L F++ + TA+L Y + G A LF MP V
Sbjct: 137 SSSLPACHGLALGRALHAYAFKLALAGDSYVATALLGMYARGGDADAARALFDEMPDPHV 196
Query: 162 VASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKE 221
V +M+ + G + AR +FD M KD W+ MI Y + G E + LF M +
Sbjct: 197 VPVTAMLTCYAKMGALDDARELFDGMPSKDFICWNAMIDGYTQHGRPNEALRLFRWMLRS 256
Query: 222 GVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQ-FDVDVYVASVLITMYIKCGELVK 280
GV + ++I LS A L + + GR +H+ + + ++ V + LI MY KCG L
Sbjct: 257 GVDPDEVAIILALSAVAQLGTAESGRWLHSYVKNSRRVQLNARVGTALIDMYCKCGSLED 316
Query: 281 GKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSY 340
+F++ KDIV+WN++I+GYA +G K+L++F ++ S G+ P D+T +G+L+ACS+
Sbjct: 317 AVSVFNSIGDKDIVVWNAMINGYAMHGDSRKALEMFSQLRSQGLWPTDITFIGLLNACSH 376
Query: 341 TGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWG 400
+G V EG + F+SM+ +Y + PK EHY CMVDLLGRAG +E+A L+++M PD ++W
Sbjct: 377 SGLVDEGHQFFQSMEEEYAIVPKIEHYGCMVDLLGRAGLIEEAFHLVQSMTIAPDTVMWV 436
Query: 401 SLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRN 460
SLL ACR H + L + A L+ N+G YILLSNIYA+ G + +VA +R M+
Sbjct: 437 SLLAACRLHKNMALGQQIADYLVAGGLANSGMYILLSNIYAAVGNWEEVARVRSMMKASG 496
Query: 461 VIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDV 520
+ K PGCS IEV +KV+ F D +SHP I MLEK+ G+++E G+ P + VLHD+
Sbjct: 497 IQKEPGCSAIEVGRKVYEFVAGD-MSHPRTDEIYAMLEKMNGIVKEQGHVPQTELVLHDL 555
Query: 521 DEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIIL 580
DE K +L HSEKLAVA+GL+ G I+++KNLR C DCH+ +KLISK+ GR+I+
Sbjct: 556 DEVTKEKALAVHSEKLAVAFGLISTAPGETIKIVKNLRACADCHAVLKLISKITGRKIVF 615
Query: 581 RDANRFHHFKDGLCSCRDYW 600
RD NRFHHF DG C+C DYW
Sbjct: 616 RDRNRFHHFVDGSCTCGDYW 635
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 105/217 (48%), Gaps = 9/217 (4%)
Query: 41 TVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVI 100
T +LG + R D AR LFD MP+ VV T M+ Y + G +D+ RE+FD MP K+ I
Sbjct: 169 TALLGMYARGGDADAARALFDEMPDPHVVPVTAMLTCYAKMGALDDARELFDGMPSKDFI 228
Query: 101 SWTTMISGYVNNNRIDVARKLFEVM----PEKNEVSWTAMLMGYTQCGRIQDAWELFKAM 156
W MI GY + R + A +LF M + +EV+ L Q G + L +
Sbjct: 229 CWNAMIDGYTQHGRPNEALRLFRWMLRSGVDPDEVAIILALSAVAQLGTAESGRWLHSYV 288
Query: 157 PMKSVVASN-----SMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEV 211
V N ++I + G ++ A VF+ + +KD W+ MI Y G +
Sbjct: 289 KNSRRVQLNARVGTALIDMYCKCGSLEDAVSVFNSIGDKDIVVWNAMINGYAMHGDSRKA 348
Query: 212 IDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQ 248
+++F+ ++ +G+ + I +L+ C+ +D G Q
Sbjct: 349 LEMFSQLRSQGLWPTDITFIGLLNACSHSGLVDEGHQ 385
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 106/225 (47%), Gaps = 13/225 (5%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVV 69
TA++ Y G A LF +MP+ +VV T ML + + +DDAR LFD MP KD +
Sbjct: 169 TALLGMYARGGDADAARALFDEMPDPHVVPVTAMLTCYAKMGALDDARELFDGMPSKDFI 228
Query: 70 AQTNMVLGYCQDGRVDEGREIFDEMPKKNV----ISWTTMISGYVNNNRIDVARKLFEVM 125
M+ GY Q GR +E +F M + V ++ +S + R L +
Sbjct: 229 CWNAMIDGYTQHGRPNEALRLFRWMLRSGVDPDEVAIILALSAVAQLGTAESGRWLHSYV 288
Query: 126 PEKNEVSW-----TAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKA 180
V TA++ Y +CG ++DA +F ++ K +V N+MI G +G+ +KA
Sbjct: 289 KNSRRVQLNARVGTALIDMYCKCGSLEDAVSVFNSIGDKDIVVWNAMINGYAMHGDSRKA 348
Query: 181 RVVFDQMREK----DDATWSGMIKVYERKGYELEVIDLFTLMQKE 221
+F Q+R + D T+ G++ G E F M++E
Sbjct: 349 LEMFSQLRSQGLWPTDITFIGLLNACSHSGLVDEGHQFFQSMEEE 393
>gi|115470299|ref|NP_001058748.1| Os07g0113500 [Oryza sativa Japonica Group]
gi|22831309|dbj|BAC16163.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|24414055|dbj|BAC22304.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113610284|dbj|BAF20662.1| Os07g0113500 [Oryza sativa Japonica Group]
gi|125598898|gb|EAZ38474.1| hypothetical protein OsJ_22862 [Oryza sativa Japonica Group]
Length = 634
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 220/560 (39%), Positives = 325/560 (58%), Gaps = 7/560 (1%)
Query: 47 FIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWT-TM 105
+ R+D L + P+ V T+ + + G + EM + +I + T+
Sbjct: 76 YAASDRLDLTVTLLRLTPDPTTVFYTSAIHAHSSRGLHLAALALLSEMLGRGLIPTSHTL 135
Query: 106 ISGYVNNNRIDVARKL----FEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSV 161
S + + + R L F++ + TA+L Y + G A LF MP V
Sbjct: 136 SSSLPACHGLALGRALHAYAFKLALAGDSYVATALLGMYARGGDADAARALFDEMPDPHV 195
Query: 162 VASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKE 221
V +M+ + G + AR +FD M KD W+ MI Y + G E + LF M +
Sbjct: 196 VPVTAMLTCYAKMGALDDARELFDGMPSKDFICWNAMIDGYTQHGRPNEALRLFRWMLRS 255
Query: 222 GVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQ-FDVDVYVASVLITMYIKCGELVK 280
GV + ++I LS A L + + GR +H+ + + ++ V + LI MY KCG L
Sbjct: 256 GVDPDEVAIILALSAVAQLGTAESGRWLHSYVKNSRRVQLNARVGTALIDMYCKCGSLED 315
Query: 281 GKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSY 340
+F++ KDIV+WN++I+GYA +G K+L++F ++ S G+ P D+T +G+L+ACS+
Sbjct: 316 AVSVFNSIGDKDIVVWNAMINGYAMHGDSRKALEMFSQLRSQGLWPTDITFIGLLNACSH 375
Query: 341 TGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWG 400
+G V EG + F+SM+ +Y + PK EHY CMVDLLGRAG +E+A L+++M PD ++W
Sbjct: 376 SGLVDEGHQFFQSMEEEYAIVPKIEHYGCMVDLLGRAGLIEEAFHLVQSMTIAPDTVMWV 435
Query: 401 SLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRN 460
SLL ACR H + L + A L+ N+G YILLSNIYA+ G + +VA +R M+
Sbjct: 436 SLLAACRLHKNMALGQQIADYLVAGGLANSGMYILLSNIYAAVGNWEEVARVRSMMKASG 495
Query: 461 VIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDV 520
+ K PGCS IEV +KV+ F D +SHP I MLEK+ G+++E G+ P + VLHD+
Sbjct: 496 IQKEPGCSAIEVGRKVYEFVAGD-MSHPRTDEIYAMLEKMNGIVKEQGHVPQTELVLHDL 554
Query: 521 DEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIIL 580
DE K +L HSEKLAVA+GL+ G I+++KNLR C DCH+ +KLISK+ GR+I+
Sbjct: 555 DEVTKEKALAVHSEKLAVAFGLISTAPGETIKIVKNLRACADCHAVLKLISKITGRKIVF 614
Query: 581 RDANRFHHFKDGLCSCRDYW 600
RD NRFHHF DG C+C DYW
Sbjct: 615 RDRNRFHHFVDGSCTCGDYW 634
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 105/217 (48%), Gaps = 9/217 (4%)
Query: 41 TVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVI 100
T +LG + R D AR LFD MP+ VV T M+ Y + G +D+ RE+FD MP K+ I
Sbjct: 168 TALLGMYARGGDADAARALFDEMPDPHVVPVTAMLTCYAKMGALDDARELFDGMPSKDFI 227
Query: 101 SWTTMISGYVNNNRIDVARKLFEVM----PEKNEVSWTAMLMGYTQCGRIQDAWELFKAM 156
W MI GY + R + A +LF M + +EV+ L Q G + L +
Sbjct: 228 CWNAMIDGYTQHGRPNEALRLFRWMLRSGVDPDEVAIILALSAVAQLGTAESGRWLHSYV 287
Query: 157 PMKSVVASN-----SMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEV 211
V N ++I + G ++ A VF+ + +KD W+ MI Y G +
Sbjct: 288 KNSRRVQLNARVGTALIDMYCKCGSLEDAVSVFNSIGDKDIVVWNAMINGYAMHGDSRKA 347
Query: 212 IDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQ 248
+++F+ ++ +G+ + I +L+ C+ +D G Q
Sbjct: 348 LEMFSQLRSQGLWPTDITFIGLLNACSHSGLVDEGHQ 384
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 106/225 (47%), Gaps = 13/225 (5%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVV 69
TA++ Y G A LF +MP+ +VV T ML + + +DDAR LFD MP KD +
Sbjct: 168 TALLGMYARGGDADAARALFDEMPDPHVVPVTAMLTCYAKMGALDDARELFDGMPSKDFI 227
Query: 70 AQTNMVLGYCQDGRVDEGREIFDEMPKKNV----ISWTTMISGYVNNNRIDVARKLFEVM 125
M+ GY Q GR +E +F M + V ++ +S + R L +
Sbjct: 228 CWNAMIDGYTQHGRPNEALRLFRWMLRSGVDPDEVAIILALSAVAQLGTAESGRWLHSYV 287
Query: 126 PEKNEVSW-----TAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKA 180
V TA++ Y +CG ++DA +F ++ K +V N+MI G +G+ +KA
Sbjct: 288 KNSRRVQLNARVGTALIDMYCKCGSLEDAVSVFNSIGDKDIVVWNAMINGYAMHGDSRKA 347
Query: 181 RVVFDQMREK----DDATWSGMIKVYERKGYELEVIDLFTLMQKE 221
+F Q+R + D T+ G++ G E F M++E
Sbjct: 348 LEMFSQLRSQGLWPTDITFIGLLNACSHSGLVDEGHQFFQSMEEE 392
>gi|356526561|ref|XP_003531885.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Glycine max]
Length = 658
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 219/566 (38%), Positives = 332/566 (58%), Gaps = 23/566 (4%)
Query: 53 IDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+D R L D ++D T ++ Y + G +D ++FDE ++ + W +
Sbjct: 98 LDVHRCLVDSGFDQDPFLATKLINMYYELGSIDRALKVFDETRERTIYVWNALFRALA-- 155
Query: 113 NRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLG 172
+ ++L ++ + N + + YT + EL P++ ++ IL G
Sbjct: 156 -MVGHGKELLDLYIQMNWIGTPSDRFTYTYVLKACVVSEL-SVCPLRKGKEIHAHILRHG 213
Query: 173 ----------------QNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFT 216
+ G V A VF M K+ +WS MI + + ++ ++LF
Sbjct: 214 YEANIHVMTTLLDVYAKFGSVSYANSVFCAMPTKNFVSWSAMIACFAKNEMPMKALELFQ 273
Query: 217 LMQKEGVRV--NFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIK 274
LM E N +++++L CA LA+L+ G+ +H ++R Q D + V + LITMY +
Sbjct: 274 LMMFEACNSVPNSVTMVNMLQACAGLAALEQGKLIHGYILRRQLDSILPVLNALITMYGR 333
Query: 275 CGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGV 334
CGE++ G+ +FDN +D+V WNS+IS Y +G G+K++++F M GV P ++ + V
Sbjct: 334 CGEVLMGQRVFDNMKKRDVVSWNSLISIYGMHGFGKKAIQIFENMIHQGVSPSYISFITV 393
Query: 335 LSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEP 394
L ACS+ G V+EG+ +FESM SKY + P EHYACMVDLLGRA ++ +A+KLIE M FEP
Sbjct: 394 LGACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLGEAIKLIEDMHFEP 453
Query: 395 DAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRK 454
+WGSLLG+CR H ++LAE A+ L +LEP+NAG Y+LL++IYA + + + K
Sbjct: 454 GPTVWGSLLGSCRIHCNVELAERASTVLFELEPRNAGNYVLLADIYAEAKLWSEAKSVMK 513
Query: 455 NMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSS 514
+ R + K PGCSWIEV++KV+ F D +P+ I +L K+ ++ GY P ++
Sbjct: 514 LLEARGLQKLPGCSWIEVKRKVYSFVSVD-EHNPQIEEIHALLVKLSNEMKAQGYVPQTN 572
Query: 515 FVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVM 574
VL+D+DEEEK + HSEKLAVA+GL+ +G IR+ KNLR+C DCH+ K ISK
Sbjct: 573 VVLYDLDEEEKERIVLGHSEKLAVAFGLINTAKGETIRIRKNLRLCEDCHAVTKFISKFA 632
Query: 575 GREIILRDANRFHHFKDGLCSCRDYW 600
REI++RD NRFHHF+DG+CSC DYW
Sbjct: 633 NREILVRDVNRFHHFRDGVCSCGDYW 658
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 82/373 (21%), Positives = 149/373 (39%), Gaps = 68/373 (18%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVV 69
T ++ Y E G I A +F + E+ + W + + + + L D+ + + +
Sbjct: 117 TKLINMYYELGSIDRALKVFDETRERTIYVWNALFRAL---AMVGHGKELLDLYIQMNWI 173
Query: 70 AQTN------MVLGYCQDGRVD-----EGREIFDEMPKK----NVISWTTMISGYVNNNR 114
+ VL C + +G+EI + + N+ TT++ Y
Sbjct: 174 GTPSDRFTYTYVLKACVVSELSVCPLRKGKEIHAHILRHGYEANIHVMTTLLDVYAKFGS 233
Query: 115 IDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAM---PMKSVVAS------- 164
+ A +F MP KN VSW+AM+ + + A ELF+ M SV S
Sbjct: 234 VSYANSVFCAMPTKNFVSWSAMIACFAKNEMPMKALELFQLMMFEACNSVPNSVTMVNML 293
Query: 165 -------------------------------NSMILGLGQNGEVQKARVVFDQMREKDDA 193
N++I G+ GEV + VFD M+++D
Sbjct: 294 QACAGLAALEQGKLIHGYILRRQLDSILPVLNALITMYGRCGEVLMGQRVFDNMKKRDVV 353
Query: 194 TWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQL 253
+W+ +I +Y G+ + I +F M +GV ++ S I+VL C+ ++ G+ + +
Sbjct: 354 SWNSLISIYGMHGFGKKAIQIFENMIHQGVSPSYISFITVLGACSHAGLVEEGKILFESM 413
Query: 254 V---RCQFDVDVYVASV-LITMYIKCGELVKGKLIFDNFASKDIVMWNSIISG---YAQY 306
+ R ++ Y V L+ + GE + KLI D +W S++ +
Sbjct: 414 LSKYRIHPGMEHYACMVDLLGRANRLGEAI--KLIEDMHFEPGPTVWGSLLGSCRIHCNV 471
Query: 307 GLGEKSLKVFHEM 319
L E++ V E+
Sbjct: 472 ELAERASTVLFEL 484
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 96/200 (48%), Gaps = 7/200 (3%)
Query: 237 CASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMW 296
CA SL +G VH LV FD D ++A+ LI MY + G + + +FD + I +W
Sbjct: 88 CAQKNSLSYGLDVHRCLVDSGFDQDPFLATKLINMYYELGSIDRALKVFDETRERTIYVW 147
Query: 297 NSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYT----GKVKEGREIFE 352
N++ A G G++ L ++ +M G D T VL AC + +++G+EI
Sbjct: 148 NALFRALAMVGHGKELLDLYIQMNWIGTPSDRFTYTYVLKACVVSELSVCPLRKGKEIHA 207
Query: 353 SMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKL 412
+ ++ E ++D+ + G V A + AMP + + + W +++ AC ++
Sbjct: 208 HIL-RHGYEANIHVMTTLLDVYAKFGSVSYANSVFCAMPTK-NFVSWSAMI-ACFAKNEM 264
Query: 413 DLAEVAAKKLLQLEPKNAGP 432
+ + +L+ E N+ P
Sbjct: 265 PMKALELFQLMMFEACNSVP 284
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 97/202 (48%), Gaps = 14/202 (6%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDM 62
E N+ T ++ Y + G ++ A ++F MP KN VSW+ M+ F ++ A LF +
Sbjct: 215 EANIHVMTTLLDVYAKFGSVSYANSVFCAMPTKNFVSWSAMIACFAKNEMPMKALELFQL 274
Query: 63 M------PEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVIS----WTTMISGYVNN 112
M + V NM+ +++G+ I + ++ + S +I+ Y
Sbjct: 275 MMFEACNSVPNSVTMVNMLQACAGLAALEQGKLIHGYILRRQLDSILPVLNALITMYGRC 334
Query: 113 NRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASN-SMILGL 171
+ + +++F+ M +++ VSW +++ Y G + A ++F+ M + V S S I L
Sbjct: 335 GEVLMGQRVFDNMKKRDVVSWNSLISIYGMHGFGKKAIQIFENMIHQGVSPSYISFITVL 394
Query: 172 G---QNGEVQKARVVFDQMREK 190
G G V++ +++F+ M K
Sbjct: 395 GACSHAGLVEEGKILFESMLSK 416
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 100/224 (44%), Gaps = 30/224 (13%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM------PEKNVVSWTVMLGGFIRDSRID 54
MP +N VSW+AM+ + + M +A LF M N V+ ML + ++
Sbjct: 244 MPTKNFVSWSAMIACFAKNEMPMKALELFQLMMFEACNSVPNSVTMVNMLQACAGLAALE 303
Query: 55 DA---------RRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTM 105
R+L ++P + ++ Y + G V G+ +FD M K++V+SW ++
Sbjct: 304 QGKLIHGYILRRQLDSILPVLNA-----LITMYGRCGEVLMGQRVFDNMKKRDVVSWNSL 358
Query: 106 ISGYVNNNRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSV 161
IS Y + A ++FE M + + +S+ +L + G +++ LF++M K
Sbjct: 359 ISIYGMHGFGKKAIQIFENMIHQGVSPSYISFITVLGACSHAGLVEEGKILFESMLSKYR 418
Query: 162 VASN-----SMILGLGQNGEVQKA-RVVFDQMREKDDATWSGMI 199
+ M+ LG+ + +A +++ D E W ++
Sbjct: 419 IHPGMEHYACMVDLLGRANRLGEAIKLIEDMHFEPGPTVWGSLL 462
>gi|116792842|gb|ABK26521.1| unknown [Picea sitchensis]
Length = 370
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 189/371 (50%), Positives = 266/371 (71%), Gaps = 1/371 (0%)
Query: 230 LISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFA 289
+ +L CAS+A+L+ G+QVHA +++ F++DV V++ L+ MY KCG + + +F
Sbjct: 1 MAGILRACASVAALEQGKQVHADIIKIGFELDVSVSNGLVDMYGKCGRIEDAQEVFSKLL 60
Query: 290 SKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGRE 349
D+ WN++ISG AQ+G G++++ +F +M +GV P+ +T V VLS CS+ G V EGR
Sbjct: 61 EPDVASWNAMISGLAQHGCGKEAVLLFEQMLQTGVKPNQITFVVVLSGCSHAGLVDEGRN 120
Query: 350 IFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTH 409
F+SM + + PK EHY+CMVDL GRAG +++A+ I MP EP+A +WGSLLGACR H
Sbjct: 121 YFDSMTRDHGISPKAEHYSCMVDLFGRAGCLDEALNFINQMPVEPNASVWGSLLGACRVH 180
Query: 410 MKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSW 469
++LAE A ++L++L P+N G Y+LLSNIYA+ GR+ D ++RK M+ R+V K PGCSW
Sbjct: 181 GNIELAERAVEQLIELTPENPGTYVLLSNIYAAAGRWDDAGKVRKMMKDRSVKKEPGCSW 240
Query: 470 IEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSL 529
IEV+ KVH F D SHP+ I LE + ++ AGY P+++FVLHDV+EE+K L
Sbjct: 241 IEVQNKVHPFIVGDS-SHPQIEEIYETLETLTLQMKAAGYIPNTNFVLHDVEEEQKEWIL 299
Query: 530 RYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHF 589
+HSEKLA+A+G++ P G IRV+KNLRVCGDCH+A K IS+++ REI+LRD +RFHHF
Sbjct: 300 GHHSEKLAIAFGIISTPPGTTIRVVKNLRVCGDCHTATKFISRIVSREIVLRDTHRFHHF 359
Query: 590 KDGLCSCRDYW 600
KDG CSC DYW
Sbjct: 360 KDGQCSCGDYW 370
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 94/230 (40%), Gaps = 35/230 (15%)
Query: 161 VVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQK 220
V SN ++ G+ G ++ A+ VF ++ E D A+W+ MI + G E + LF M +
Sbjct: 33 VSVSNGLVDMYGKCGRIEDAQEVFSKLLEPDVASWNAMISGLAQHGCGKEAVLLFEQMLQ 92
Query: 221 EGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVK 280
GV+ N + + VLS C+ +D GR + R
Sbjct: 93 TGVKPNQITFVVVLSGCSHAGLVDEGRNYFDSMTR------------------------- 127
Query: 281 GKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSY 340
D+ S ++ ++ + + G +++L ++M V P+ +L AC
Sbjct: 128 -----DHGISPKAEHYSCMVDLFGRAGCLDEALNFINQM---PVEPNASVWGSLLGACRV 179
Query: 341 TGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAM 390
G ++ E + P T Y + ++ AG+ +DA K+ + M
Sbjct: 180 HGNIELAERAVEQLIELTPENPGT--YVLLSNIYAAAGRWDDAGKVRKMM 227
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 69/157 (43%), Gaps = 10/157 (6%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDM 62
E +V +V Y + G I +A +F ++ E +V SW M+ G + +A LF+
Sbjct: 30 ELDVSVSNGLVDMYGKCGRIEDAQEVFSKLLEPDVASWNAMISGLAQHGCGKEAVLLFEQ 89
Query: 63 MPEKDVVA-QTNMVL---GYCQDGRVDEGREIFDEMPKKNVIS-----WTTMISGYVNNN 113
M + V Q V+ G G VDEGR FD M + + IS ++ M+ +
Sbjct: 90 MLQTGVKPNQITFVVVLSGCSHAGLVDEGRNYFDSMTRDHGISPKAEHYSCMVDLFGRAG 149
Query: 114 RIDVARKLFEVMP-EKNEVSWTAMLMGYTQCGRIQDA 149
+D A MP E N W ++L G I+ A
Sbjct: 150 CLDEALNFINQMPVEPNASVWGSLLGACRVHGNIELA 186
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 79/168 (47%), Gaps = 13/168 (7%)
Query: 52 RIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEM----PKKNVISWTTMIS 107
RI+DA+ +F + E DV + M+ G Q G E +F++M K N I++ ++S
Sbjct: 48 RIEDAQEVFSKLLEPDVASWNAMISGLAQHGCGKEAVLLFEQMLQTGVKPNQITFVVVLS 107
Query: 108 GYVNNNRIDVARKLFEVMPEKNEVS-----WTAMLMGYTQCGRIQDAWELFKAMPMKSVV 162
G + +D R F+ M + +S ++ M+ + + G + +A MP++
Sbjct: 108 GCSHAGLVDEGRNYFDSMTRDHGISPKAEHYSCMVDLFGRAGCLDEALNFINQMPVEPNA 167
Query: 163 ASNSMILGLGQ-NGEVQKARVVFDQMRE---KDDATWSGMIKVYERKG 206
+ +LG + +G ++ A +Q+ E ++ T+ + +Y G
Sbjct: 168 SVWGSLLGACRVHGNIELAERAVEQLIELTPENPGTYVLLSNIYAAAG 215
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 69/145 (47%), Gaps = 10/145 (6%)
Query: 65 EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEV 124
E DV +V Y + GR+++ +E+F ++ + +V SW MISG + A LFE
Sbjct: 30 ELDVSVSNGLVDMYGKCGRIEDAQEVFSKLLEPDVASWNAMISGLAQHGCGKEAVLLFEQ 89
Query: 125 MPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNS-----MILGLGQNG 175
M + N++++ +L G + G + + F +M ++ + M+ G+ G
Sbjct: 90 MLQTGVKPNQITFVVVLSGCSHAGLVDEGRNYFDSMTRDHGISPKAEHYSCMVDLFGRAG 149
Query: 176 EVQKARVVFDQMR-EKDDATWSGMI 199
+ +A +QM E + + W ++
Sbjct: 150 CLDEALNFINQMPVEPNASVWGSLL 174
>gi|212720716|ref|NP_001132746.1| uncharacterized protein LOC100194233 [Zea mays]
gi|194695290|gb|ACF81729.1| unknown [Zea mays]
Length = 539
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 208/566 (36%), Positives = 331/566 (58%), Gaps = 71/566 (12%)
Query: 74 MVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMP------- 126
++ GY ++G ++ R++FDEMP +NV +W M++G N+ + + F M
Sbjct: 6 LIGGYVKNGDLETARKLFDEMPARNVATWNAMVAGLTNSGLNEESLGFFFAMRREGMQPD 65
Query: 127 --------------------------------EKNEVSWTAMLMGYTQCGRIQDAWELFK 154
+++ +++ Y +CG ++D +
Sbjct: 66 EYGLGSLFRCCAGLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLRDGEAALR 125
Query: 155 AMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDL 214
A+P ++V+ N+ I G QNG+ + A ++
Sbjct: 126 ALPSLNIVSCNTTISGRTQNGDAEGA-------------------------------LEF 154
Query: 215 FTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIK 274
F LM+ GV N + +S ++ C+ LA+L G+Q+HA ++ D V V + L+ MY +
Sbjct: 155 FCLMRGAGVEANAVTFVSAVTSCSDLAALAQGQQIHALAIKTGVDKVVPVMTSLVHMYSR 214
Query: 275 CGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGV 334
CG L + + ++ D+V+ +++IS Y +G G+K++ +F +M ++G P++VT + +
Sbjct: 215 CGCLGDSERVCLEYSGTDLVLCSAMISAYGFHGHGQKAVGLFKQMMAAGAEPNEVTFLTL 274
Query: 335 LSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEP 394
L ACS++G EG FE M Y ++P +HY C+VDLLGR+G + +A LI +MP +P
Sbjct: 275 LYACSHSGLKDEGMNCFELMTKTYGLQPSVKHYTCIVDLLGRSGCLNEAEDLILSMPVQP 334
Query: 395 DAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRK 454
D +IW +LL AC+T K D+AE A+++++L+P ++ Y+LLSNI A+ R+ DV+++R+
Sbjct: 335 DGVIWKTLLSACKTQKKFDMAERIAERVIELDPHDSASYVLLSNIRATSSRWEDVSKVRE 394
Query: 455 NMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSS 514
MR++NV K PG SW+E++ ++H F D SH I+ LE++ +R+ GY PD S
Sbjct: 395 TMREQNVRKEPGVSWVELKGQIHQFCTGD-ESHSRQREIVECLEEMMTRIRQCGYAPDMS 453
Query: 515 FVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVM 574
V HD+++EEK SL +HSEKLA+A+ + LPEGVPIRVMKNLRVC DCH AIKL+SKV+
Sbjct: 454 MVFHDMEDEEKEVSLAHHSEKLAIAFAFLSLPEGVPIRVMKNLRVCDDCHVAIKLMSKVI 513
Query: 575 GREIILRDANRFHHFKDGLCSCRDYW 600
GREI++RD +RFHHFKDG CSC DYW
Sbjct: 514 GREIVVRDVSRFHHFKDGKCSCGDYW 539
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 72/222 (32%), Positives = 118/222 (53%), Gaps = 1/222 (0%)
Query: 165 NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVR 224
N +I G +NG+++ AR +FD+M ++ ATW+ M+ G E + F M++EG++
Sbjct: 4 NILIGGYVKNGDLETARKLFDEMPARNVATWNAMVAGLTNSGLNEESLGFFFAMRREGMQ 63
Query: 225 VNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLI 284
+ L S+ CA L + GRQVHA +VR D D+ V S L MY++CG L G+
Sbjct: 64 PDEYGLGSLFRCCAGLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLRDGEAA 123
Query: 285 FDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKV 344
S +IV N+ ISG Q G E +L+ F M +GV + VT V +++CS +
Sbjct: 124 LRALPSLNIVSCNTTISGRTQNGDAEGALEFFCLMRGAGVEANAVTFVSAVTSCSDLAAL 183
Query: 345 KEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKL 386
+G++I ++ K V+ +V + R G + D+ ++
Sbjct: 184 AQGQQI-HALAIKTGVDKVVPVMTSLVHMYSRCGCLGDSERV 224
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 73/348 (20%), Positives = 137/348 (39%), Gaps = 55/348 (15%)
Query: 7 VSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF------ 60
+SW ++ GYV+ G + A LF +MP +NV +W M+ G +++ F
Sbjct: 1 MSWNILIGGYVKNGDLETARKLFDEMPARNVATWNAMVAGLTNSGLNEESLGFFFAMRRE 60
Query: 61 DMMPE--------------KDVVA-------------QTNMVLG------YCQDGRVDEG 87
M P+ +DVV+ +M +G Y + G + +G
Sbjct: 61 GMQPDEYGLGSLFRCCAGLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLRDG 120
Query: 88 REIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMP----EKNEVSWTAMLMGYTQC 143
+P N++S T ISG N + A + F +M E N V++ + + +
Sbjct: 121 EAALRALPSLNIVSCNTTISGRTQNGDAEGALEFFCLMRGAGVEANAVTFVSAVTSCSDL 180
Query: 144 GRIQDAWELFKAMPMKS-----VVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGM 198
+ ++ A+ +K+ V S++ + G + + V + D S M
Sbjct: 181 AALAQGQQI-HALAIKTGVDKVVPVMTSLVHMYSRCGCLGDSERVCLEYSGTDLVLCSAM 239
Query: 199 IKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRC-- 256
I Y G+ + + LF M G N + +++L C+ D G + +
Sbjct: 240 ISAYGFHGHGQKAVGLFKQMMAAGAEPNEVTFLTLLYACSHSGLKDEGMNCFELMTKTYG 299
Query: 257 -QFDVDVYVASVLITMYIKCGELVKGK-LIFDNFASKDIVMWNSIISG 302
Q V Y + ++ + + G L + + LI D V+W +++S
Sbjct: 300 LQPSVKHY--TCIVDLLGRSGCLNEAEDLILSMPVQPDGVIWKTLLSA 345
>gi|356577059|ref|XP_003556647.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 821
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 225/617 (36%), Positives = 355/617 (57%), Gaps = 18/617 (2%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRL- 59
MPE++VV W +++ GYV++G+ E+ +F +M + V + ++ +++
Sbjct: 206 MPEKDVVCWNSIIGGYVQKGLFWESIQMFLEMIGGGLRPSPVTMANLLKACGQSGLKKVG 265
Query: 60 -------FDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+ DV T++V Y G +FD M +++ISW MISGYV N
Sbjct: 266 MCAHSYVLALGMGNDVFVLTSLVDMYSNLGDTGSAALVFDSMCSRSLISWNAMISGYVQN 325
Query: 113 NRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSV----VAS 164
I + LF + + + + +++ G +Q +++ L + K + V S
Sbjct: 326 GMIPESYALFRRLVQSGSGFDSGTLVSLIRGCSQTSDLENGRILHSCIIRKELESHLVLS 385
Query: 165 NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVR 224
+++ + G +++A +VF +M +K+ TW+ M+ + GY + + LF MQ+E V
Sbjct: 386 TAIVDMYSKCGAIKQATIVFGRMGKKNVITWTAMLVGLSQNGYAEDALKLFCQMQEEKVA 445
Query: 225 VNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLI 284
N +L+S++ CA L SL GR VHA +R + D + S LI MY KCG++ + +
Sbjct: 446 ANSVTLVSLVHCCAHLGSLTKGRTVHAHFIRHGYAFDAVITSALIDMYAKCGKIHSAEKL 505
Query: 285 FDN-FASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGK 343
F+N F KD+++ NS+I GY +G G +L V+ M + P+ T V +L+ACS++G
Sbjct: 506 FNNEFHLKDVILCNSMIMGYGMHGHGRYALGVYSRMIEERLKPNQTTFVSLLTACSHSGL 565
Query: 344 VKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
V+EG+ +F SM+ + V P+ +HYAC+VDL RAG++E+A +L++ MPF+P + +LL
Sbjct: 566 VEEGKALFHSMERDHDVRPQHKHYACLVDLHSRAGRLEEADELVKQMPFQPSTDVLEALL 625
Query: 404 GACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIK 463
CRTH ++ A +L+ L+ N+G Y++LSNIYA ++ V +R MR + + K
Sbjct: 626 SGCRTHKNTNMGIQIADRLISLDYLNSGIYVMLSNIYAEARKWESVNYIRGLMRMQGMKK 685
Query: 464 PPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEE 523
PG S IEV KV+ F D SHP I ++LE + + GY PD+S VL DV+E
Sbjct: 686 IPGYSLIEVGNKVYTFFASD-DSHPSWADIYQLLENLRLEVEAEGYIPDTSCVLRDVNEP 744
Query: 524 EKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDA 583
KV L HSE+LA+A+GL+ P G I++ KNLRVC DCH+ K ISK++ REII+RDA
Sbjct: 745 MKVKLLWGHSERLAIAFGLLSTPCGSLIKITKNLRVCVDCHNVTKYISKIVQREIIVRDA 804
Query: 584 NRFHHFKDGLCSCRDYW 600
NRFHHF +G CSC D+W
Sbjct: 805 NRFHHFVNGKCSCNDFW 821
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 117/505 (23%), Positives = 234/505 (46%), Gaps = 57/505 (11%)
Query: 12 MVRGYVEEGMITEAGTLFWQ--MPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVV 69
++R Y + G + A +F Q +PE V + M+ GF+R+ + + RLF MM D+
Sbjct: 85 LIRVYSDLGFLGHARNVFDQCSLPETAVCN--AMIAGFLRNQQHMEVPRLFRMMGSCDIE 142
Query: 70 AQTN---MVLGYCQDGRVDE-GREIFDEMPKK----NVISWTTMISGYVNNNRIDVARKL 121
+ L C D DE G EI ++ ++ ++M++ V + A+K+
Sbjct: 143 INSYTCMFALKACTDLLDDEVGMEIIRAAVRRGFHLHLYVGSSMVNFLVKRGYLADAQKV 202
Query: 122 FEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAM----------------------PMK 159
F+ MPEK+ V W +++ GY Q G ++ ++F M +K
Sbjct: 203 FDGMPEKDVVCWNSIIGGYVQKGLFWESIQMFLEMIGGGLRPSPVTMANLLKACGQSGLK 262
Query: 160 SV-VASNSMILGLGQN----------------GEVQKARVVFDQMREKDDATWSGMIKVY 202
V + ++S +L LG G+ A +VFD M + +W+ MI Y
Sbjct: 263 KVGMCAHSYVLALGMGNDVFVLTSLVDMYSNLGDTGSAALVFDSMCSRSLISWNAMISGY 322
Query: 203 ERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDV 262
+ G E LF + + G + +L+S++ C+ + L++GR +H+ ++R + + +
Sbjct: 323 VQNGMIPESYALFRRLVQSGSGFDSGTLVSLIRGCSQTSDLENGRILHSCIIRKELESHL 382
Query: 263 YVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSS 322
+++ ++ MY KCG + + ++F K+++ W +++ G +Q G E +LK+F +M
Sbjct: 383 VLSTAIVDMYSKCGAIKQATIVFGRMGKKNVITWTAMLVGLSQNGYAEDALKLFCQMQEE 442
Query: 323 GVMPDDVTLVGVLSACSYTGKVKEGREIFES-MKSKYLVEPKTEHYACMVDLLGRAGQVE 381
V + VTLV ++ C++ G + +GR + ++ Y + + ++D+ + G++
Sbjct: 443 KVAANSVTLVSLVHCCAHLGSLTKGRTVHAHFIRHGYAFDAVIT--SALIDMYAKCGKIH 500
Query: 382 DAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQ--LEPKNAGPYILLSNI 439
A KL D I+ S++ H A ++++ L+P N ++ L
Sbjct: 501 SAEKLFNNEFHLKDVILCNSMIMGYGMHGHGRYALGVYSRMIEERLKP-NQTTFVSLLTA 559
Query: 440 YASQGRFHDVAELRKNMRKRNVIKP 464
+ G + L +M + + ++P
Sbjct: 560 CSHSGLVEEGKALFHSMERDHDVRP 584
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 88/180 (48%), Gaps = 9/180 (5%)
Query: 227 FPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFD 286
F SL+ S +L H + +HAQ+++ + ++A+ LI +Y G L + +FD
Sbjct: 49 FSSLLHQFS-----NTLIHVKSIHAQIIKNWVSTESFLAAKLIRVYSDLGFLGHARNVFD 103
Query: 287 NFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKE 346
+ + + N++I+G+ + + ++F M S + + T + L AC+ +
Sbjct: 104 QCSLPETAVCNAMIAGFLRNQQHMEVPRLFRMMGSCDIEINSYTCMFALKACTDLLDDEV 163
Query: 347 GREIFE-SMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
G EI +++ + + + MV+ L + G + DA K+ + MP E D + W S++G
Sbjct: 164 GMEIIRAAVRRGFHLHLYVG--SSMVNFLVKRGYLADAQKVFDGMP-EKDVVCWNSIIGG 220
>gi|347954530|gb|AEP33765.1| organelle transcript processing 82, partial [Lepidium sativum]
Length = 672
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 233/649 (35%), Positives = 363/649 (55%), Gaps = 50/649 (7%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPE----KNVVSWTVMLGGFIRDSRIDDA 56
+ E N++ W M RG+ A L+ M N S+ +L + + +
Sbjct: 25 IQEPNLLIWNTMFRGHALNSDSVTALKLYVCMISLGLLPNSYSFPFLLKSCAKSKALIEG 84
Query: 57 RRL----FDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+++ + + D+ T+++ Y Q+GR+++ ++FD ++V+S+T +I+GY +
Sbjct: 85 QQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRHVVSYTALITGYASR 144
Query: 113 NRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMIL--- 169
I+ ARKLF+ + K+ VSW AM+ GY + ++A EL+K M +V S ++
Sbjct: 145 GYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKTNVKPDESTMVTVV 204
Query: 170 ----------------------GLGQN--------------GEVQKARVVFDQMREKDDA 193
G G N GEV+ A +F + +KD
Sbjct: 205 SACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEVETACGLFQGLAKKDVI 264
Query: 194 TWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQL 253
+W+ +I + E + LF M + G N +++SVL CA L ++D GR +H +
Sbjct: 265 SWNTLIGGHTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYI 324
Query: 254 VRCQFDVD--VYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEK 311
+ V + + LI MY KCG++ K +FD+ ++ + WN++I G+A +G
Sbjct: 325 NKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTRSLSSWNAMIFGFAMHGKANA 384
Query: 312 SLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMV 371
+ +F +M +G+ PDD+T VG+LSACS++G + GR IF SM Y + PK EHY CM+
Sbjct: 385 AFDLFSKMRKNGIDPDDITFVGLLSACSHSGMLDLGRHIFRSMSQDYKITPKLEHYGCMI 444
Query: 372 DLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAG 431
DLLG G ++A ++I MP EPD +IW SLL AC+ H ++L E A+ L+++EP+N G
Sbjct: 445 DLLGHCGLFKEAKEMIRTMPMEPDGVIWCSLLKACKMHNNVELGESYAQNLIKIEPENPG 504
Query: 432 PYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHP 491
Y+LLSNIYA+ GR+ VA++R + + + K PGCS IE++ VH F D HP +
Sbjct: 505 SYVLLSNIYATAGRWDQVAKIRTLLNDKGIKKAPGCSSIEIDSVVHEFIIGDKF-HPRNR 563
Query: 492 MIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPI 551
I RMLE++ L+ E G+ PD+S VL +++EE K +LR+HSEKLA+A+GL+ G +
Sbjct: 564 EIYRMLEEMEMLMEETGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKL 623
Query: 552 RVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
++KNLRVC +CH A KLISK+ REII RD R H KDG+ SC DYW
Sbjct: 624 TIVKNLRVCRNCHEATKLISKIYKREIIARDRTRLHLLKDGVWSCHDYW 672
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 110/466 (23%), Positives = 198/466 (42%), Gaps = 82/466 (17%)
Query: 90 IFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPE----KNEVSWTAMLMGYTQCGR 145
IF+ + + N++ W TM G+ N+ A KL+ M N S+ +L +
Sbjct: 21 IFETIQEPNLLIWNTMFRGHALNSDSVTALKLYVCMISLGLLPNSYSFPFLLKSCAKSKA 80
Query: 146 IQDAWEL----FKAMPMKSVVASNSMILGLGQNGEVQK---------------------- 179
+ + ++ K + + S+I QNG ++
Sbjct: 81 LIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRHVVSYTALITG 140
Query: 180 ---------ARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSL 230
AR +FD++ KD +W+ MI Y E ++L+ M K V+ + ++
Sbjct: 141 YASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKTNVKPDESTM 200
Query: 231 ISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFAS 290
++V+S CA S++ GRQ+H+ + F ++ + +VLI +Y KCGE+ +F A
Sbjct: 201 VTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEVETACGLFQGLAK 260
Query: 291 KDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREI 350
KD++ WN++I G+ L +++L +F EM SG P+DVT++ VL AC++ G + GR I
Sbjct: 261 KDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWI 320
Query: 351 FESMKSKYL-VEPKTEHYACMVDLLGRAGQVEDAMKLIEAM------------------- 390
+ + V + ++D+ + G +E A ++ ++M
Sbjct: 321 HVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTRSLSSWNAMIFGFAMHG 380
Query: 391 ---------------PFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQ---LEPKNAGP 432
+PD I + LL AC LDL + + Q + PK
Sbjct: 381 KANAAFDLFSKMRKNGIDPDDITFVGLLSACSHSGMLDLGRHIFRSMSQDYKITPK-LEH 439
Query: 433 YILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHM 478
Y + ++ G F + E+ + M ++P G W + K M
Sbjct: 440 YGCMIDLLGHCGLFKEAKEMIRTMP----MEPDGVIWCSLLKACKM 481
>gi|302786698|ref|XP_002975120.1| hypothetical protein SELMODRAFT_102603 [Selaginella moellendorffii]
gi|300157279|gb|EFJ23905.1| hypothetical protein SELMODRAFT_102603 [Selaginella moellendorffii]
Length = 485
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 192/480 (40%), Positives = 307/480 (63%), Gaps = 7/480 (1%)
Query: 127 EKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKS----VVASNSMILGLGQNGEVQKARV 182
E+N+V++ +L G+T G +++ + + V+ +++ G+ V++AR
Sbjct: 7 ERNKVTYVTVLSGFTTPGSLEEGRRVHSRVAGAGLEVDVIVGTALVNMYGKCQSVEEARA 66
Query: 183 VFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLM--QKEGVRVNFPSLISVLSVCASL 240
F+++ + +WS M+ Y + G+ ++L+ M ++G+ N + I++L C+ L
Sbjct: 67 AFEKISRPNVVSWSAMLAAYAQNGHARMALELYREMGSARKGMAPNRVTFITLLDACSFL 126
Query: 241 ASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSII 300
+L GR++HA + FD D+ V + L+ Y +CG L K++FD +D++ W+S+I
Sbjct: 127 GALAEGRKIHAAVAERGFDTDLVVCNALVNFYGRCGSLGDAKIVFDGMRRRDVISWSSMI 186
Query: 301 SGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLV 360
S +AQ G +++++++H M S G +PDD+ + VL ACS +G V+ + F S+ V
Sbjct: 187 SAFAQRGRVDEAMELYHRMLSEGTLPDDIIFISVLFACSNSGVVEASGDFFRSIVGDTQV 246
Query: 361 EPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAK 420
EP EHYACMVD+LGRAG++ DA L+ MPF P +++ ++L AC+ + ++ E AA+
Sbjct: 247 EPTLEHYACMVDVLGRAGKLRDAEDLLRLMPFHPGPLLYMTMLSACKLYTDVERGEAAAE 306
Query: 421 KLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFT 480
+ +L+P+N+ PYI L+NIY++ R D A +RK M +R + K PGCSWIEV +VH F
Sbjct: 307 VVFELDPENSSPYITLANIYSAAKRPKDAARIRKLMEERGIKKKPGCSWIEVLDRVHEFI 366
Query: 481 GRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAY 540
D + HP+ I ++++G ++EAGY D+ VL DV+E+EK + L YHSEKLA+A+
Sbjct: 367 AGDKM-HPQRDEIYAEIQRLGRQMKEAGYFQDTKVVLQDVEEDEKENLLWYHSEKLAIAF 425
Query: 541 GLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
GL+ P G P+R++KNLRVC DCH+A K+ISKV GREI++RD NRFHHF DG+CSC DYW
Sbjct: 426 GLISTPPGAPLRIVKNLRVCSDCHAATKVISKVTGREILVRDTNRFHHFLDGMCSCNDYW 485
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 112/202 (55%), Gaps = 8/202 (3%)
Query: 218 MQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGE 277
M+ GV N + ++VLS + SL+ GR+VH+++ +VDV V + L+ MY KC
Sbjct: 1 MEIRGVERNKVTYVTVLSGFTTPGSLEEGRRVHSRVAGAGLEVDVIVGTALVNMYGKCQS 60
Query: 278 LVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSS--GVMPDDVTLVGVL 335
+ + + F+ + ++V W+++++ YAQ G +L+++ EM S+ G+ P+ VT + +L
Sbjct: 61 VEEARAAFEKISRPNVVSWSAMLAAYAQNGHARMALELYREMGSARKGMAPNRVTFITLL 120
Query: 336 SACSYTGKVKEGREIFESMKSKYLVEPKTEHYAC--MVDLLGRAGQVEDAMKLIEAMPFE 393
ACS+ G + EGR+I ++ + T+ C +V+ GR G + DA + + M
Sbjct: 121 DACSFLGALAEGRKIHAAVAERGF---DTDLVVCNALVNFYGRCGSLGDAKIVFDGMR-R 176
Query: 394 PDAIIWGSLLGACRTHMKLDLA 415
D I W S++ A ++D A
Sbjct: 177 RDVISWSSMISAFAQRGRVDEA 198
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 112/220 (50%), Gaps = 14/220 (6%)
Query: 34 EKNVVSWTVMLGGFIRDSRIDDARRLFDMMP----EKDVVAQTNMVLGYCQDGRVDEGRE 89
E+N V++ +L GF +++ RR+ + E DV+ T +V Y + V+E R
Sbjct: 7 ERNKVTYVTVLSGFTTPGSLEEGRRVHSRVAGAGLEVDVIVGTALVNMYGKCQSVEEARA 66
Query: 90 IFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEK------NEVSWTAMLMGYTQC 143
F+++ + NV+SW+ M++ Y N +A +L+ M N V++ +L +
Sbjct: 67 AFEKISRPNVVSWSAMLAAYAQNGHARMALELYREMGSARKGMAPNRVTFITLLDACSFL 126
Query: 144 GRIQDAWELFKAMPMKS----VVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMI 199
G + + ++ A+ + +V N+++ G+ G + A++VFD MR +D +WS MI
Sbjct: 127 GALAEGRKIHAAVAERGFDTDLVVCNALVNFYGRCGSLGDAKIVFDGMRRRDVISWSSMI 186
Query: 200 KVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCAS 239
+ ++G E ++L+ M EG + ISVL C++
Sbjct: 187 SAFAQRGRVDEAMELYHRMLSEGTLPDDIIFISVLFACSN 226
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 131/288 (45%), Gaps = 26/288 (9%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDM 62
E +V+ TA+V Y + + EA F ++ NVVSW+ ML + ++ A L+
Sbjct: 42 EVDVIVGTALVNMYGKCQSVEEARAAFEKISRPNVVSWSAMLAAYAQNGHARMALELYRE 101
Query: 63 MPEKDVVAQTNMV-----LGYCQD-GRVDEGREIFDEMPKK----NVISWTTMISGYVNN 112
M N V L C G + EGR+I + ++ +++ +++ Y
Sbjct: 102 MGSARKGMAPNRVTFITLLDACSFLGALAEGRKIHAAVAERGFDTDLVVCNALVNFYGRC 161
Query: 113 NRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASN----SMI 168
+ A+ +F+ M ++ +SW++M+ + Q GR+ +A EL+ M + + + S++
Sbjct: 162 GSLGDAKIVFDGMRRRDVISWSSMISAFAQRGRVDEAMELYHRMLSEGTLPDDIIFISVL 221
Query: 169 LGLGQNGEVQKA-----RVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGV 223
+G V+ + +V D E ++ M+ V R G + DL LM
Sbjct: 222 FACSNSGVVEASGDFFRSIVGDTQVEPTLEHYACMVDVLGRAGKLRDAEDLLRLMPFHPG 281
Query: 224 RVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITM 271
+ + +++LS C ++ G + A++V F++D +S IT+
Sbjct: 282 PLLY---MTMLSACKLYTDVERG-EAAAEVV---FELDPENSSPYITL 322
>gi|356553444|ref|XP_003545066.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Glycine max]
Length = 1033
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 241/645 (37%), Positives = 365/645 (56%), Gaps = 59/645 (9%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFD------MM 63
A+V Y + I A ++F MP K+ VSW ++ G + R ++A F M+
Sbjct: 394 NALVNLYAKCNAIDNARSIFQLMPSKDTVSWNSIISGLDHNERFEEAVACFHTMRRNGMV 453
Query: 64 PEKDVVAQTNMVLGYCQD-GRVDEGREIFDEMPK----KNVISWTTMISGYVNNNRIDVA 118
P K V T L C G + G++I E K +V +++ Y + ++
Sbjct: 454 PSKFSVIST---LSSCASLGWIMLGQQIHGEGIKCGLDLDVSVSNALLTLYAETDCMEEY 510
Query: 119 RKLFEVMPEKNEVSWTAMLMGYTQCGR------------IQDAWE--------------- 151
+K+F +MPE ++VSW + + +Q W+
Sbjct: 511 QKVFFLMPEYDQVSWNSFIGALATSEASVLQAIKYFLEMMQAGWKPNRVTFINILSAVSS 570
Query: 152 --------LFKAMPMKSVVAS-----NSMILGLGQNGEVQKARVVFDQMREK-DDATWSG 197
A+ +K VA N+++ G+ +++ ++F +M E+ D+ +W+
Sbjct: 571 LSLLELGRQIHALILKHSVADDNAIENTLLAFYGKCEQMEDCEIIFSRMSERRDEVSWNA 630
Query: 198 MIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQ 257
MI Y G + + L LM ++G R++ +L +VLS CAS+A+L+ G +VHA +R
Sbjct: 631 MISGYIHNGILHKAMGLVWLMMQKGQRLDDFTLATVLSACASVATLERGMEVHACAIRAC 690
Query: 258 FDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFH 317
+ +V V S L+ MY KCG++ F+ ++I WNS+ISGYA++G G K+LK+F
Sbjct: 691 LEAEVVVGSALVDMYAKCGKIDYASRFFELMPVRNIYSWNSMISGYARHGHGGKALKLFT 750
Query: 318 EMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRA 377
+M G +PD VT VGVLSACS+ G V EG E F+SM Y + P+ EH++CMVDLLGRA
Sbjct: 751 QMKQHGQLPDHVTFVGVLSACSHVGLVDEGFEHFKSMGEVYELAPRIEHFSCMVDLLGRA 810
Query: 378 GQVEDAMKLIEAMPFEPDAIIWGSLLGAC--RTHMKLDLAEVAAKKLLQLEPKNAGPYIL 435
G V+ + I+ MP P+A+IW ++LGAC +L AAK L++LEP NA Y+L
Sbjct: 811 GDVKKLEEFIKTMPMNPNALIWRTILGACCRANSRNTELGRRAAKMLIELEPLNAVNYVL 870
Query: 436 LSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMR 495
LSN++A+ G++ DV E R MR V K GCSW+ ++ VH+F D +HPE I
Sbjct: 871 LSNMHAAGGKWEDVEEARLAMRNAEVKKEAGCSWVTMKDGVHVFVAGD-QTHPEKEKIYD 929
Query: 496 MLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMK 555
L++I +R+ GY P++ + L+D++ E K L YHSEKLA+A+ L + E +PIR++K
Sbjct: 930 KLKEIMNKMRDLGYVPETKYALYDLELENKEELLSYHSEKLAIAFVLTRQSE-LPIRIIK 988
Query: 556 NLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
NLRVCGDCH+A K IS ++ R+IILRD+NRFHHF G+CSC+DYW
Sbjct: 989 NLRVCGDCHTAFKYISNIVNRQIILRDSNRFHHFDGGICSCQDYW 1033
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 115/440 (26%), Positives = 209/440 (47%), Gaps = 37/440 (8%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MP++N+VSW+ +V GY + GM EA LF + ++ +G +R + L
Sbjct: 100 MPQKNLVSWSCLVSGYAQNGMPDEACMLFRGIISAGLLPNHYAIGSALRACQELGPNMLK 159
Query: 61 DMMPEKDVVAQ----TNMVL--------GYCQDGRVDEGREIFDEMPKKNVISWTTMISG 108
M ++++ ++MVL +C +D+ R +F+E+ K SW ++IS
Sbjct: 160 LGMEIHGLISKSPYASDMVLSNVLMSMYSHC-SASIDDARRVFEEIKMKTSASWNSIISV 218
Query: 109 YVNNNRIDVARKLFEVMPEK--------NEVSWTAMLM---GYTQCGRI---QDAWELFK 154
Y A KLF M + NE ++ +++ CG Q + K
Sbjct: 219 YCRRGDAISAFKLFSSMQREATELNCRPNEYTFCSLVTVACSLVDCGLTLLEQMLARIEK 278
Query: 155 AMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDL 214
+ +K + ++++ G + G + A+++F+QM +++ T +G++ R+ E +
Sbjct: 279 SSFVKDLYVGSALVSGFARYGLIDSAKMIFEQMDDRNAVTMNGLMVGLARQHQGEEAAKI 338
Query: 215 FTLMQKEGVRVNFPSLISVLSVCASLASLDHGR----QVHAQLVRCQF-DVDVYVASVLI 269
F M K+ V +N S +LS ++L G+ +VHA L+R DV + + + L+
Sbjct: 339 FKEM-KDLVEINASSYAVLLSAFTEFSNLKEGKRKGQEVHAYLIRNALVDVWILIGNALV 397
Query: 270 TMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDV 329
+Y KC + + IF SKD V WNSIISG E+++ FH M +G++P
Sbjct: 398 NLYAKCNAIDNARSIFQLMPSKDTVSWNSIISGLDHNERFEEAVACFHTMRRNGMVPSKF 457
Query: 330 TLVGVLSACSYTGKVKEGREIF-ESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIE 388
+++ LS+C+ G + G++I E +K ++ + ++ L +E+ K+
Sbjct: 458 SVISTLSSCASLGWIMLGQQIHGEGIKCGLDLDVSVSN--ALLTLYAETDCMEEYQKVFF 515
Query: 389 AMPFEPDAIIWGSLLGACRT 408
MP E D + W S +GA T
Sbjct: 516 LMP-EYDQVSWNSFIGALAT 534
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 98/429 (22%), Positives = 195/429 (45%), Gaps = 28/429 (6%)
Query: 4 RNVVSWTAMVRGYVEEGMITEAGTLFWQM----------PEKNVVSWTVMLGGFIRDSRI 53
+ SW +++ Y G A LF M P + V + + D +
Sbjct: 207 KTSASWNSIISVYCRRGDAISAFKLFSSMQREATELNCRPNEYTFCSLVTVACSLVDCGL 266
Query: 54 DDARRLFDMMPE----KDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGY 109
++ + + KD+ + +V G+ + G +D + IF++M +N ++ ++ G
Sbjct: 267 TLLEQMLARIEKSSFVKDLYVGSALVSGFARYGLIDSAKMIFEQMDDRNAVTMNGLMVGL 326
Query: 110 VNNNRIDVARKLFEVMP---EKNEVSWTAMLMGYTQCGRIQD---------AWELFKAMP 157
++ + A K+F+ M E N S+ +L +T+ +++ A+ + A+
Sbjct: 327 ARQHQGEEAAKIFKEMKDLVEINASSYAVLLSAFTEFSNLKEGKRKGQEVHAYLIRNALV 386
Query: 158 MKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTL 217
++ N+++ + + AR +F M KD +W+ +I + E + F
Sbjct: 387 DVWILIGNALVNLYAKCNAIDNARSIFQLMPSKDTVSWNSIISGLDHNERFEEAVACFHT 446
Query: 218 MQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGE 277
M++ G+ + S+IS LS CASL + G+Q+H + ++C D+DV V++ L+T+Y +
Sbjct: 447 MRRNGMVPSKFSVISTLSSCASLGWIMLGQQIHGEGIKCGLDLDVSVSNALLTLYAETDC 506
Query: 278 LVKGKLIFDNFASKDIVMWNSIISGYAQYGLGE-KSLKVFHEMFSSGVMPDDVTLVGVLS 336
+ + + +F D V WNS I A +++K F EM +G P+ VT + +LS
Sbjct: 507 MEEYQKVFFLMPEYDQVSWNSFIGALATSEASVLQAIKYFLEMMQAGWKPNRVTFINILS 566
Query: 337 ACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDA 396
A S ++ GR+I ++ K+ V ++ G+ Q+ED + M D
Sbjct: 567 AVSSLSLLELGRQI-HALILKHSVADDNAIENTLLAFYGKCEQMEDCEIIFSRMSERRDE 625
Query: 397 IIWGSLLGA 405
+ W +++
Sbjct: 626 VSWNAMISG 634
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 99/398 (24%), Positives = 181/398 (45%), Gaps = 58/398 (14%)
Query: 49 RDS-RIDDARRL----FDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWT 103
RDS ++DA +L + DV +V + + G + +++FDEMP+KN++SW+
Sbjct: 50 RDSCTVEDAHQLHLQIYKTGLTSDVFWCNTLVNIFVRAGNLVSAQKLFDEMPQKNLVSWS 109
Query: 104 TMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVA 163
++SGY N D A LF G G + + + + A+ +
Sbjct: 110 CLVSGYAQNGMPDEACMLFR---------------GIISAGLLPNHYAIGSALRACQELG 154
Query: 164 SNSMILGLGQNGEVQK--------------------------ARVVFDQMREKDDATWSG 197
N + LG+ +G + K AR VF++++ K A+W+
Sbjct: 155 PNMLKLGMEIHGLISKSPYASDMVLSNVLMSMYSHCSASIDDARRVFEEIKMKTSASWNS 214
Query: 198 MIKVYERKGYELEVIDLFTLMQKEGV----RVNFPSLISVLSVCASL--ASLDHGRQVHA 251
+I VY R+G + LF+ MQ+E R N + S+++V SL L Q+ A
Sbjct: 215 IISVYCRRGDAISAFKLFSSMQREATELNCRPNEYTFCSLVTVACSLVDCGLTLLEQMLA 274
Query: 252 QLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEK 311
++ + F D+YV S L++ + + G + K+IF+ ++ V N ++ G A+ GE+
Sbjct: 275 RIEKSSFVKDLYVGSALVSGFARYGLIDSAKMIFEQMDDRNAVTMNGLMVGLARQHQGEE 334
Query: 312 SLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGR----EIFESMKSKYLVEPKTEHY 367
+ K+F EM V + + +LSA + +KEG+ E+ + LV+
Sbjct: 335 AAKIFKEM-KDLVEINASSYAVLLSAFTEFSNLKEGKRKGQEVHAYLIRNALVDVWILIG 393
Query: 368 ACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
+V+L + +++A + + MP D + W S++
Sbjct: 394 NALVNLYAKCNAIDNARSIFQLMP-SKDTVSWNSIISG 430
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 82/337 (24%), Positives = 149/337 (44%), Gaps = 31/337 (9%)
Query: 140 YTQCGRIQDAWEL----FKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATW 195
Y ++DA +L +K V N+++ + G + A+ +FD+M +K+ +W
Sbjct: 49 YRDSCTVEDAHQLHLQIYKTGLTSDVFWCNTLVNIFVRAGNLVSAQKLFDEMPQKNLVSW 108
Query: 196 SGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLAS--LDHGRQVHAQL 253
S ++ Y + G E LF + G+ N ++ S L C L L G ++H +
Sbjct: 109 SCLVSGYAQNGMPDEACMLFRGIISAGLLPNHYAIGSALRACQELGPNMLKLGMEIHGLI 168
Query: 254 VRCQFDVDVYVASVLITMYIKCGELVK-GKLIFDNFASKDIVMWNSIISGYAQYGLGEKS 312
+ + D+ +++VL++MY C + + +F+ K WNSIIS Y + G +
Sbjct: 169 SKSPYASDMVLSNVLMSMYSHCSASIDDARRVFEEIKMKTSASWNSIISVYCRRGDAISA 228
Query: 313 LKVFHEMFSSGV----MPDDVTLVGVLS-ACSYTGKVKEGREIFESM-----KSKYLVEP 362
K+F M P++ T +++ ACS V G + E M KS ++ +
Sbjct: 229 FKLFSSMQREATELNCRPNEYTFCSLVTVACSL---VDCGLTLLEQMLARIEKSSFVKDL 285
Query: 363 KTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKL 422
+ +V R G ++ A + E M + G ++G R H + A++ K++
Sbjct: 286 YVG--SALVSGFARYGLIDSAKMIFEQMDDRNAVTMNGLMVGLARQHQGEEAAKI-FKEM 342
Query: 423 LQLEPKNAGPY-ILLSNIYASQGRFHDVAELRKNMRK 458
L NA Y +LLS F + + L++ RK
Sbjct: 343 KDLVEINASSYAVLLS-------AFTEFSNLKEGKRK 372
>gi|255541924|ref|XP_002512026.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223549206|gb|EEF50695.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 810
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 230/617 (37%), Positives = 349/617 (56%), Gaps = 24/617 (3%)
Query: 4 RNVVSWTAMVRGYVEEGMITEAGTLFWQMP-----EKNVVSWTVMLGGFIRDSRIDDARR 58
+N VSW M+ G +G I EA LF +M E N V+ +L + S++ +
Sbjct: 198 KNAVSWNTMIGGLCTKGYIFEAFNLFREMQMQEDIEVNEVTVLNILPACLEISQLRSLKE 257
Query: 59 LFDMMP----EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNR 114
L + D + V Y + G + +F M K V SW +I G N
Sbjct: 258 LHGYSIRHGFQYDELVANGFVAAYAKCGMLICAERVFYSMETKTVNSWNALIGGCAQNGD 317
Query: 115 IDVARKLFEVMPEKNEV-SW---TAMLMGYTQC-----GRIQDAWELFKAMPMKSVVASN 165
A L+ M V W ++L+ G+ + L + + S + +
Sbjct: 318 PRKALNLYIQMTYSGLVPDWFTIGSLLLASAHLKSLRYGKEVHGFVLRHGLEIDSFIGIS 377
Query: 166 SMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRV 225
+ L + GE AR++FD M EK +W+ MI Y + G + + LF + +G +
Sbjct: 378 LLSLYI-HCGESSSARLLFDGMEEKSSVSWNAMISGYSQNGLPEDALILFRKLVSDGFQP 436
Query: 226 NFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIF 285
+ +++SVL C+ ++L G++ H ++ DV+VA I MY K G + + + +F
Sbjct: 437 SDIAVVSVLGACSQQSALRLGKETHCYALKALLMEDVFVACSTIDMYAKSGCIKESRSVF 496
Query: 286 DNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVK 345
D +KD+ WN+II+ Y +G GE+S+++F M G MPD T +G+L+ CS+ G V+
Sbjct: 497 DGLKNKDLASWNAIIAAYGVHGDGEESIELFERMRKVGQMPDGFTFIGILTVCSHAGLVE 556
Query: 346 EGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
EG + F M++ + +EPK EHYAC++D+LGRAG+++DA++L+ MP +PD+ +W SLL
Sbjct: 557 EGLKYFNEMQNFHGIEPKLEHYACVMDMLGRAGRLDDALRLVHEMPEQPDSRVWSSLLSF 616
Query: 406 CRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPP 465
CR +L++ ++ A+KLL+LEPKN Y+ LSN+YA GR+ DV +R+ ++ + K
Sbjct: 617 CRNFGELEIGQIVAEKLLELEPKNVENYVSLSNLYAGSGRWDDVRRVRQMIKDIGLQKDA 676
Query: 466 GCSWIEVEKKVHMFTGRDCV--SHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEE 523
GCSWIE+ KVH F D + E M R LEK + + GY P++S VLHDVDEE
Sbjct: 677 GCSWIELGGKVHSFVAGDNLLPQSKEMSMTWRKLEK---KMCKIGYKPNTSAVLHDVDEE 733
Query: 524 EKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDA 583
+K+ LR HSEKLA+ +GL+ +G +R+ KNLR+C DCH+A K +S+V GREII+RD
Sbjct: 734 KKIEKLRGHSEKLAICFGLLNTTKGTTLRIFKNLRICVDCHNASKFMSEVTGREIIIRDN 793
Query: 584 NRFHHFKDGLCSCRDYW 600
RFHHFKDGLCSC DYW
Sbjct: 794 KRFHHFKDGLCSCGDYW 810
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 113/430 (26%), Positives = 205/430 (47%), Gaps = 25/430 (5%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPE------KNVVSWTVMLGGFIRDSRID 54
MP RN+VSW +++ G+ E G + + +M ++ + +L R+ +
Sbjct: 92 MPVRNLVSWNSIISGFSENGFSKDCFDMLVEMMAGEEGLLPDIATLVTVLPVCAREVDVQ 151
Query: 55 DARRLFDMMPE----KDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYV 110
R+ + + +DV ++V Y + G + E + +FD+ +KN +SW TMI G
Sbjct: 152 MGIRIHGLAVKLGLSEDVRVNNSLVDMYSKCGYLTEAQMLFDKNNRKNAVSWNTMIGGLC 211
Query: 111 NNNRIDVARKLFEVMP-----EKNEVSWTAMLMGYTQCGRIQDAWELF-----KAMPMKS 160
I A LF M E NEV+ +L + +++ EL
Sbjct: 212 TKGYIFEAFNLFREMQMQEDIEVNEVTVLNILPACLEISQLRSLKELHGYSIRHGFQYDE 271
Query: 161 VVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQK 220
+VA N + + G + A VF M K +W+ +I + G + ++L+ M
Sbjct: 272 LVA-NGFVAAYAKCGMLICAERVFYSMETKTVNSWNALIGGCAQNGDPRKALNLYIQMTY 330
Query: 221 EGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVK 280
G+ ++ ++ S+L A L SL +G++VH ++R ++D ++ L+++YI CGE
Sbjct: 331 SGLVPDWFTIGSLLLASAHLKSLRYGKEVHGFVLRHGLEIDSFIGISLLSLYIHCGESSS 390
Query: 281 GKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSY 340
+L+FD K V WN++ISGY+Q GL E +L +F ++ S G P D+ +V VL ACS
Sbjct: 391 ARLLFDGMEEKSSVSWNAMISGYSQNGLPEDALILFRKLVSDGFQPSDIAVVSVLGACSQ 450
Query: 341 TGKVKEGREIFESMKSKYLVEPKTEHYAC-MVDLLGRAGQVEDAMKLIEAMPFEPDAIIW 399
++ G+E L+E AC +D+ ++G ++++ + + + D W
Sbjct: 451 QSALRLGKETHCYALKALLMEDV--FVACSTIDMYAKSGCIKESRSVFDGLK-NKDLASW 507
Query: 400 GSLLGACRTH 409
+++ A H
Sbjct: 508 NAIIAAYGVH 517
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 101/407 (24%), Positives = 185/407 (45%), Gaps = 70/407 (17%)
Query: 67 DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMP 126
DV ++ Y + G VD ++F MP +N++SW ++ISG+ N ++ F+++
Sbjct: 65 DVFVGNALIAMYGKFGFVDAAVKVFHYMPVRNLVSWNSIISGFSENG---FSKDCFDMLV 121
Query: 127 EKNEVSWTAMLMGYTQCGRIQDAWELFKAMPM-----------------------KSVVA 163
E M+ G + G + D L +P+ + V
Sbjct: 122 E--------MMAG--EEGLLPDIATLVTVLPVCAREVDVQMGIRIHGLAVKLGLSEDVRV 171
Query: 164 SNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQ-KEG 222
+NS++ + G + +A+++FD+ K+ +W+ MI KGY E +LF MQ +E
Sbjct: 172 NNSLVDMYSKCGYLTEAQMLFDKNNRKNAVSWNTMIGGLCTKGYIFEAFNLFREMQMQED 231
Query: 223 VRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGK 282
+ VN +++++L C ++ L +++H +R F D VA+ + Y KCG L+ +
Sbjct: 232 IEVNEVTVLNILPACLEISQLRSLKELHGYSIRHGFQYDELVANGFVAAYAKCGMLICAE 291
Query: 283 LIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTG 342
+F + +K + WN++I G AQ G K+L ++ +M SG++PD T+ +L A ++
Sbjct: 292 RVFYSMETKTVNSWNALIGGCAQNGDPRKALNLYIQMTYSGLVPDWFTIGSLLLASAHLK 351
Query: 343 KVKEGREIF--------------------------ESMKSKYLV----EPKTEHYACMVD 372
++ G+E+ ES ++ L E + + M+
Sbjct: 352 SLRYGKEVHGFVLRHGLEIDSFIGISLLSLYIHCGESSSARLLFDGMEEKSSVSWNAMIS 411
Query: 373 LLGRAGQVEDAMKLIEAM---PFEPDAIIWGSLLGACRTHMKLDLAE 416
+ G EDA+ L + F+P I S+LGAC L L +
Sbjct: 412 GYSQNGLPEDALILFRKLVSDGFQPSDIAVVSVLGACSQQSALRLGK 458
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 92/201 (45%), Gaps = 11/201 (5%)
Query: 212 IDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHG--RQVHAQLVRCQFDVDVYVASVLI 269
+ L T + FP +I A SLD G +H +++ +DV+V + LI
Sbjct: 19 VKLITDTEFNADNFTFPCVIK-----ACTGSLDRGLGEVIHGMVIKMGLLLDVFVGNALI 73
Query: 270 TMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSS--GVMPD 327
MY K G + +F +++V WNSIISG+++ G + + EM + G++PD
Sbjct: 74 AMYGKFGFVDAAVKVFHYMPVRNLVSWNSIISGFSENGFSKDCFDMLVEMMAGEEGLLPD 133
Query: 328 DVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLI 387
TLV VL C+ V+ G I + K + +VD+ + G + +A L
Sbjct: 134 IATLVTVLPVCAREVDVQMGIRI-HGLAVKLGLSEDVRVNNSLVDMYSKCGYLTEAQMLF 192
Query: 388 EAMPFEPDAIIWGSLLGACRT 408
+ +A+ W +++G T
Sbjct: 193 DKNN-RKNAVSWNTMIGGLCT 212
>gi|108863919|gb|ABG22332.1| vegetative storage protein, putative [Oryza sativa Japonica Group]
Length = 645
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 218/542 (40%), Positives = 329/542 (60%), Gaps = 19/542 (3%)
Query: 72 TNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVN----NNRIDVARKLFE--VM 125
T+++ Y + G + + +FDEMP + + WT +I+ Y++ + VAR F +
Sbjct: 110 TSLLSLYAKCGLLHRAQRVFDEMPHPSTVPWTALITAYMDAGDLREAVHVARNAFANGMR 169
Query: 126 PEKNEVSWTAMLMGYTQCGRIQD------AWELFKAMPM-KSVVASNSMILGLGQNGEVQ 178
P+ S+TA+ + T C RI D W + + +SV + + + + GE+
Sbjct: 170 PD----SFTAVRV-LTACARIADLATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMA 224
Query: 179 KARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCA 238
KAR VFD+MR KD W M+ Y G+ E +DLF MQ EG++ + ++ LS C
Sbjct: 225 KAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACT 284
Query: 239 SLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNS 298
L +LD GRQ + +F + + + LI MY KCG V+ ++F KDI++WN+
Sbjct: 285 RLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNA 344
Query: 299 IISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKY 358
+I G G + + + +M SGV +D T +G+L +C++TG +++GR F +M Y
Sbjct: 345 MILGLGMTGHEKIAFALVGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLY 404
Query: 359 LVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVA 418
+ P+ EHY CMVDLL RAG +++A +L++ MP +A+I G+LLG C+ H +LAE
Sbjct: 405 HISPRIEHYGCMVDLLSRAGLLQEAHQLVDDMPMPANAVILGALLGGCKIHRNTELAEHV 464
Query: 419 AKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHM 478
K+L+ LEP N+G Y++LSNIY+++GR+ D A+LR +M+ + V K P CSW+E E KVH
Sbjct: 465 LKQLILLEPWNSGNYVMLSNIYSNRGRWEDAAKLRLDMKAKGVEKVPACSWVEFEGKVHE 524
Query: 479 FTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAV 538
F D SHP I + L+++G ++ GY P + V+ DV++EEK H+L +HSEKLA+
Sbjct: 525 FRVGD-KSHPLSDQIYKKLDELGLEMKTMGYEPTTEVVMFDVEDEEKEHTLVHHSEKLAI 583
Query: 539 AYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRD 598
A+ L+ G IRV KNLRVC DCH+AIKL+S++ REII+RD NRFH F+DG CSC D
Sbjct: 584 AFNLLITGPGETIRVTKNLRVCSDCHTAIKLVSRITHREIIVRDNNRFHCFRDGSCSCND 643
Query: 599 YW 600
YW
Sbjct: 644 YW 645
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 94/181 (51%), Gaps = 6/181 (3%)
Query: 228 PSLISVLSVCASLASLDH----GRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKL 283
PS +++ S + L H G Q+HA+ ++ + +V + L+++Y KCG L + +
Sbjct: 68 PSHLTIPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQR 127
Query: 284 IFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGK 343
+FD V W ++I+ Y G +++ V F++G+ PD T V VL+AC+
Sbjct: 128 VFDEMPHPSTVPWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIAD 187
Query: 344 VKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
+ G ++ + + + + + A VDL + G++ A ++ + M + DA+ WG+++
Sbjct: 188 LATGETVWRAAEQEGVAQSVFVATAA-VDLYVKCGEMAKAREVFDKMRHK-DAVAWGAMV 245
Query: 404 G 404
G
Sbjct: 246 G 246
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 95/441 (21%), Positives = 164/441 (37%), Gaps = 129/441 (29%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MP + V WTA++ Y++ G + EA + +N + + F + R+
Sbjct: 132 MPHPSTVPWTALITAYMDAGDLREAVHV-----ARNAFANGMRPDSFTAVRVLTACARIA 186
Query: 61 DMM--------PEKDVVAQTNMVLG-----YCQDGRVDEGREIFDEMPKKNVISWTTMIS 107
D+ E++ VAQ+ V Y + G + + RE+FD+M K+ ++W M+
Sbjct: 187 DLATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVG 246
Query: 108 GYVNNNRIDVARKLFEVMPEK--------------------------------------- 128
GY +N A LF M +
Sbjct: 247 GYASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLD 306
Query: 129 NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMR 188
N V TA++ Y +CG +AW +F+ M K ++ N+MILGLG G + A + Q
Sbjct: 307 NPVLGTALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQ-- 364
Query: 189 EKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQ 248
M+K GV++N + I +L C + GR+
Sbjct: 365 -----------------------------MEKSGVKLNDNTFIGLLCSCTHTGLIQDGRR 395
Query: 249 VHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGL 308
+ + +Y S I Y ++ ++ GL
Sbjct: 396 YFHNMTK------LYHISPRIEHY------------------------GCMVDLLSRAGL 425
Query: 309 GEKSLKVFHEMFSSGVMPDDVTLVG-VLSACSYTGKVKEGREIFES-MKSKYLVEP-KTE 365
L+ H++ MP + ++G +L C K+ E+ E +K L+EP +
Sbjct: 426 ----LQEAHQLVDDMPMPANAVILGALLGGC----KIHRNTELAEHVLKQLILLEPWNSG 477
Query: 366 HYACMVDLLGRAGQVEDAMKL 386
+Y + ++ G+ EDA KL
Sbjct: 478 NYVMLSNIYSNRGRWEDAAKL 498
>gi|222615375|gb|EEE51507.1| hypothetical protein OsJ_32672 [Oryza sativa Japonica Group]
Length = 1100
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 218/542 (40%), Positives = 329/542 (60%), Gaps = 19/542 (3%)
Query: 72 TNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVN----NNRIDVARKLFE--VM 125
T+++ Y + G + + +FDEMP + + WT +I+ Y++ + VAR F +
Sbjct: 565 TSLLSLYAKCGLLHRAQRVFDEMPHPSTVPWTALITAYMDAGDLREAVHVARNAFANGMR 624
Query: 126 PEKNEVSWTAMLMGYTQCGRIQD------AWELFKAMPM-KSVVASNSMILGLGQNGEVQ 178
P+ S+TA+ + T C RI D W + + +SV + + + + GE+
Sbjct: 625 PD----SFTAVRV-LTACARIADLATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMA 679
Query: 179 KARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCA 238
KAR VFD+MR KD W M+ Y G+ E +DLF MQ EG++ + ++ LS C
Sbjct: 680 KAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACT 739
Query: 239 SLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNS 298
L +LD GRQ + +F + + + LI MY KCG V+ ++F KDI++WN+
Sbjct: 740 RLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNA 799
Query: 299 IISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKY 358
+I G G + + + +M SGV +D T +G+L +C++TG +++GR F +M Y
Sbjct: 800 MILGLGMTGHEKIAFALVGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLY 859
Query: 359 LVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVA 418
+ P+ EHY CMVDLL RAG +++A +L++ MP +A+I G+LLG C+ H +LAE
Sbjct: 860 HISPRIEHYGCMVDLLSRAGLLQEAHQLVDDMPMPANAVILGALLGGCKIHRNTELAEHV 919
Query: 419 AKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHM 478
K+L+ LEP N+G Y++LSNIY+++GR+ D A+LR +M+ + V K P CSW+E E KVH
Sbjct: 920 LKQLILLEPWNSGNYVMLSNIYSNRGRWEDAAKLRLDMKAKGVEKVPACSWVEFEGKVHE 979
Query: 479 FTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAV 538
F D SHP I + L+++G ++ GY P + V+ DV++EEK H+L +HSEKLA+
Sbjct: 980 FRVGD-KSHPLSDQIYKKLDELGLEMKTMGYEPTTEVVMFDVEDEEKEHTLVHHSEKLAI 1038
Query: 539 AYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRD 598
A+ L+ G IRV KNLRVC DCH+AIKL+S++ REII+RD NRFH F+DG CSC D
Sbjct: 1039 AFNLLITGPGETIRVTKNLRVCSDCHTAIKLVSRITHREIIVRDNNRFHCFRDGSCSCND 1098
Query: 599 YW 600
YW
Sbjct: 1099 YW 1100
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 94/181 (51%), Gaps = 6/181 (3%)
Query: 228 PSLISVLSVCASLASLDH----GRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKL 283
PS +++ S + L H G Q+HA+ ++ + +V + L+++Y KCG L + +
Sbjct: 523 PSHLTIPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQR 582
Query: 284 IFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGK 343
+FD V W ++I+ Y G +++ V F++G+ PD T V VL+AC+
Sbjct: 583 VFDEMPHPSTVPWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIAD 642
Query: 344 VKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
+ G ++ + + + + + A VDL + G++ A ++ + M + DA+ WG+++
Sbjct: 643 LATGETVWRAAEQEGVAQSVFVATAA-VDLYVKCGEMAKAREVFDKMRHK-DAVAWGAMV 700
Query: 404 G 404
G
Sbjct: 701 G 701
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 95/441 (21%), Positives = 164/441 (37%), Gaps = 129/441 (29%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MP + V WTA++ Y++ G + EA + +N + + F + R+
Sbjct: 587 MPHPSTVPWTALITAYMDAGDLREAVHV-----ARNAFANGMRPDSFTAVRVLTACARIA 641
Query: 61 DMM--------PEKDVVAQTNMVLG-----YCQDGRVDEGREIFDEMPKKNVISWTTMIS 107
D+ E++ VAQ+ V Y + G + + RE+FD+M K+ ++W M+
Sbjct: 642 DLATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVG 701
Query: 108 GYVNNNRIDVARKLFEVMPEK--------------------------------------- 128
GY +N A LF M +
Sbjct: 702 GYASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLD 761
Query: 129 NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMR 188
N V TA++ Y +CG +AW +F+ M K ++ N+MILGLG G + A + Q
Sbjct: 762 NPVLGTALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQ-- 819
Query: 189 EKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQ 248
M+K GV++N + I +L C + GR+
Sbjct: 820 -----------------------------MEKSGVKLNDNTFIGLLCSCTHTGLIQDGRR 850
Query: 249 VHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGL 308
+ + +Y S I Y ++ ++ GL
Sbjct: 851 YFHNMTK------LYHISPRIEHY------------------------GCMVDLLSRAGL 880
Query: 309 GEKSLKVFHEMFSSGVMPDDVTLVG-VLSACSYTGKVKEGREIFES-MKSKYLVEP-KTE 365
L+ H++ MP + ++G +L C K+ E+ E +K L+EP +
Sbjct: 881 ----LQEAHQLVDDMPMPANAVILGALLGGC----KIHRNTELAEHVLKQLILLEPWNSG 932
Query: 366 HYACMVDLLGRAGQVEDAMKL 386
+Y + ++ G+ EDA KL
Sbjct: 933 NYVMLSNIYSNRGRWEDAAKL 953
>gi|414869441|tpg|DAA47998.1| TPA: hypothetical protein ZEAMMB73_181337 [Zea mays]
Length = 639
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 215/531 (40%), Positives = 325/531 (61%), Gaps = 13/531 (2%)
Query: 78 YCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNN-------RIDVARKLFEVMPEKNE 130
Y + G +D+ +FD MP +NV++WTT+++ + + R VA + V P N
Sbjct: 114 YAKFGLLDDALRMFDGMPVRNVVTWTTVVAALASADGRKQEALRFLVAMRRDGVAP--NA 171
Query: 131 VSWTAMLMGYTQCGRIQDAW-ELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMRE 189
+++++L T G + KA V +S+I + G++ R VFD+M
Sbjct: 172 YTFSSVLGACTTPGMLTAVHASTVKAGLDSDVFVRSSLIDAYVKLGDLDGGRRVFDEMVT 231
Query: 190 KDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQV 249
+D W+ +I + + G + I+LF M+ G N +L SVL C + L+ GRQV
Sbjct: 232 RDLVVWNSIIAGFAQSGDGVGAIELFMRMKDAGFSSNQGTLTSVLRACTGMVMLEAGRQV 291
Query: 250 HAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLG 309
HA +++ +D D+ + + L+ MY KCG L +F +D++ W++++SG AQ G
Sbjct: 292 HAHVLK--YDRDLILHNALLDMYCKCGSLEDADALFHRMPQRDVISWSTMVSGLAQNGKS 349
Query: 310 EKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYAC 369
++L+VF M S GV P+ VT+VGVL ACS+ G V++G F SMK + ++P+ EH+ C
Sbjct: 350 VEALRVFDLMKSQGVAPNHVTMVGVLFACSHAGLVEDGWHYFRSMKRLFGIQPEREHHNC 409
Query: 370 MVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKN 429
MVDLLGRAG++++A++ I M EPD++IW +LLGACR H LA AA+++L+LEP +
Sbjct: 410 MVDLLGRAGKLDEAVEFIHGMSLEPDSVIWRTLLGACRMHKNASLAAYAAREILKLEPDD 469
Query: 430 AGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPE 489
G +LLSN YA ++ D + K MR R + K PG SWIE+EK+VH+F D +SHP
Sbjct: 470 QGARVLLSNTYADLRQWTDAEKPWKAMRDRGMRKEPGRSWIELEKRVHVFIAGD-LSHPC 528
Query: 490 HPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGV 549
I++ L ++ G ++ GY P + FVL D+ E+K L+YHSEK+A+ +G + +G
Sbjct: 529 SDTIIQELNRLIGRIKSLGYVPQTEFVLQDLPTEQKEDLLKYHSEKMAIVFGTMHAVDGK 588
Query: 550 PIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
PIR+MKNLR+CGDCH+ KL+SK GR I++RD RFHHF+DG CSC DYW
Sbjct: 589 PIRIMKNLRICGDCHAFAKLVSKSEGRVIVIRDPVRFHHFQDGACSCGDYW 639
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 103/215 (47%), Gaps = 16/215 (7%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSR----IDDA 56
M R++V W +++ G+ + G A LF +M + S L +R ++
Sbjct: 229 MVTRDLVVWNSIIAGFAQSGDGVGAIELFMRMKDAGFSSNQGTLTSVLRACTGMVMLEAG 288
Query: 57 RRLFD--MMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNR 114
R++ + ++D++ ++ YC+ G +++ +F MP+++VISW+TM+SG N +
Sbjct: 289 RQVHAHVLKYDRDLILHNALLDMYCKCGSLEDADALFHRMPQRDVISWSTMVSGLAQNGK 348
Query: 115 IDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVAS-----N 165
A ++F++M + N V+ +L + G ++D W F++M + N
Sbjct: 349 SVEALRVFDLMKSQGVAPNHVTMVGVLFACSHAGLVEDGWHYFRSMKRLFGIQPEREHHN 408
Query: 166 SMILGLGQNGEVQKARVVFDQMR-EKDDATWSGMI 199
M+ LG+ G++ +A M E D W ++
Sbjct: 409 CMVDLLGRAGKLDEAVEFIHGMSLEPDSVIWRTLL 443
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 105/249 (42%), Gaps = 74/249 (29%)
Query: 16 YVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIR-DSRIDDARRLFDMMP---------- 64
Y + G++ +A +F MP +NVV+WT ++ D R +A R M
Sbjct: 114 YAKFGLLDDALRMFDGMPVRNVVTWTTVVAALASADGRKQEALRFLVAMRRDGVAPNAYT 173
Query: 65 --------------------------EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKN 98
+ DV +++++ Y + G +D GR +FDEM ++
Sbjct: 174 FSSVLGACTTPGMLTAVHASTVKAGLDSDVFVRSSLIDAYVKLGDLDGGRRVFDEMVTRD 233
Query: 99 VISWTTMISGYVNNNRIDVARKLFEVMPE----KNEVSWTAMLMG--------------- 139
++ W ++I+G+ + A +LF M + N+ + T++L
Sbjct: 234 LVVWNSIIAGFAQSGDGVGAIELFMRMKDAGFSSNQGTLTSVLRACTGMVMLEAGRQVHA 293
Query: 140 ------------------YTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKAR 181
Y +CG ++DA LF MP + V++ ++M+ GL QNG+ +A
Sbjct: 294 HVLKYDRDLILHNALLDMYCKCGSLEDADALFHRMPQRDVISWSTMVSGLAQNGKSVEAL 353
Query: 182 VVFDQMREK 190
VFD M+ +
Sbjct: 354 RVFDLMKSQ 362
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 84/190 (44%), Gaps = 15/190 (7%)
Query: 224 RVNFPSLISVLSVCASLASLDHGRQVHAQL-VRCQFDVD----VYVASVLITMYIKCGEL 278
R + SL ++ +C + DHGR +H + D ++V++ L +MY K G L
Sbjct: 61 RADPVSLTRLVKLCVRHGTADHGRLIHRHVEAHGPLPHDGAGGLFVSNSLASMYAKFGLL 120
Query: 279 VKGKLIFDNFASKDIVMWNSIISGYAQY-GLGEKSLKVFHEMFSSGVMPDDVTLVGVLSA 337
+FD +++V W ++++ A G +++L+ M GV P+ T VL A
Sbjct: 121 DDALRMFDGMPVRNVVTWTTVVAALASADGRKQEALRFLVAMRRDGVAPNAYTFSSVLGA 180
Query: 338 CSYTGKVK--EGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPD 395
C+ G + + + S V + ++D + G ++ ++ + M D
Sbjct: 181 CTTPGMLTAVHASTVKAGLDSDVFVR------SSLIDAYVKLGDLDGGRRVFDEM-VTRD 233
Query: 396 AIIWGSLLGA 405
++W S++
Sbjct: 234 LVVWNSIIAG 243
>gi|347954538|gb|AEP33769.1| organelle transcript processing 82, partial [Olimarabidopsis
pumila]
Length = 710
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 234/653 (35%), Positives = 365/653 (55%), Gaps = 58/653 (8%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPE----KNVVSWTVMLGGFIRDSRIDDA 56
+ E ++ W M RG+ A L+ M N ++ +L + +
Sbjct: 63 IQEPXLLIWNTMFRGHALSSDPVSALKLYVCMVSLGLLPNSYTFPFLLKSCAKSXAFKEG 122
Query: 57 RRL--------FDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISG 108
++L FD+ D+ T+++ Y Q+GR+++ +++ D+ ++V+S+T +I+G
Sbjct: 123 QQLHGQVLKFGFDL----DLYIHTSLISMYVQNGRLEDAQKVXDKSSHRDVVSYTALITG 178
Query: 109 YVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMI 168
Y + I+ A K+F+ +P K+ VSW A + GY + G ++A ELFK M +V S +
Sbjct: 179 YASRGXIESAHKMFDEIPVKDVVSWNAXISGYAETGNYKEALELFKKMMKTNVRPDESTM 238
Query: 169 L-------------------------GLGQN--------------GEVQKARVVFDQMRE 189
+ G G N GE++ A +F +
Sbjct: 239 VTVLSACAQSGSIELGRQVHSWINDHGFGXNLKIVNALIDLYSKCGELETACGLFQGLSN 298
Query: 190 KDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQV 249
KD +W+ +I Y E + LF M + G + N +++S+LS CA L ++D GR +
Sbjct: 299 KDVISWNTLIGGYTHMNLYKEALLLFQDMLRSGEKPNDVTMLSILSACAHLGAIDIGRWI 358
Query: 250 HAQLVRCQFDVD--VYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYG 307
H + + V + + LI MY KCG++ + +FD+ ++ + WN++I G+A +G
Sbjct: 359 HVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHG 418
Query: 308 LGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHY 367
+ +F M +G+ PDD+T VG+LSACS++G + GR IF SM Y + PK EHY
Sbjct: 419 RANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTRDYKLMPKLEHY 478
Query: 368 ACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEP 427
CM+DL G +G ++A K+I M EPD +IW SLL AC+ H ++L E A+ L+++EP
Sbjct: 479 GCMIDLXGHSGLFKEAEKMINTMEMEPDGVIWCSLLKACKMHGNVELGESYAQNLIKIEP 538
Query: 428 KNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSH 487
+N G Y+LLSNIYA+ R+++VA+ R + + + K PGCS IE++ VH F D H
Sbjct: 539 ENPGSYVLLSNIYATAERWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKF-H 597
Query: 488 PEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPE 547
P + I MLE++ LL EAG+ PD+S VL +++EE K +LR+HSEKLA+A+GL+
Sbjct: 598 PRNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKP 657
Query: 548 GVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
G + ++KNLRVC +CH A KLISK+ REII RD RFHHF+DG CSC DYW
Sbjct: 658 GTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGECSCNDYW 710
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 128/261 (49%), Gaps = 34/261 (13%)
Query: 183 VFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLAS 242
VFD ++E W+ M + + + + L+ M G+ N + +L CA +
Sbjct: 59 VFDTIQEPXLLIWNTMFRGHALSSDPVSALKLYVCMVSLGLLPNSYTFPFLLKSCAKSXA 118
Query: 243 LDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLI------------------ 284
G+Q+H Q+++ FD+D+Y+ + LI+MY++ G L + +
Sbjct: 119 FKEGQQLHGQVLKFGFDLDLYIHTSLISMYVQNGRLEDAQKVXDKSSHRDVVSYTALITG 178
Query: 285 -------------FDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTL 331
FD KD+V WN+ ISGYA+ G +++L++F +M + V PD+ T+
Sbjct: 179 YASRGXIESAHKMFDEIPVKDVVSWNAXISGYAETGNYKEALELFKKMMKTNVRPDESTM 238
Query: 332 VGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMP 391
V VLSAC+ +G ++ GR++ S + + + ++DL + G++E A L + +
Sbjct: 239 VTVLSACAQSGSIELGRQV-HSWINDHGFGXNLKIVNALIDLYSKCGELETACGLFQGLS 297
Query: 392 FEPDAIIWGSLLGACRTHMKL 412
D I W +L+G THM L
Sbjct: 298 -NKDVISWNTLIGG-YTHMNL 316
>gi|449457327|ref|XP_004146400.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Cucumis sativus]
Length = 720
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 238/652 (36%), Positives = 362/652 (55%), Gaps = 60/652 (9%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMP 64
NV S+ ++ Y +E + A LF +MP+ + VS+ ++ + R A +LF M
Sbjct: 73 NVFSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLFLEMR 132
Query: 65 EKDVVAQTNMVLGYCQDGRVDEG--REIFDEMPKKNVISWTT----MISGYVNNNRIDVA 118
E + + G ++ G R++ + S+ + +I+ Y N + A
Sbjct: 133 EAFLDMDGFTLSGIITACGINVGLIRQLHALSVVTGLDSYVSVGNALITSYSKNGFLKEA 192
Query: 119 RKLFEVMPE-KNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVA------------SN 165
R++F + E ++EVSW +M++ Y Q A EL+ M ++ ++ +N
Sbjct: 193 RRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVLTAFTN 252
Query: 166 SMIL-------------GLGQNGEVQKA---------------RVVFDQMREKDDATWSG 197
L G QN V R VFD++ D W+
Sbjct: 253 VQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNPDLVLWNT 312
Query: 198 MIKVYE-RKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRC 256
MI Y + E ++ F +Q G R + SL+ V+S C++++S GRQVH ++
Sbjct: 313 MISGYSLYEDLSDEALECFRQLQVVGHRPDDCSLVCVISACSNMSSPSQGRQVHGLALKL 372
Query: 257 QFDVD-VYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKV 315
+ + V + LI MY KCG L K +FD + V +NS+I+GYAQ+G+G +SL +
Sbjct: 373 DIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQHGMGFQSLHL 432
Query: 316 FHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLG 375
F M G P ++T + VL+AC++TG+V++G+ F MK K+ +EP+ H++CM+DLLG
Sbjct: 433 FQRMLEMGFTPTNITFISVLAACAHTGRVEDGKIYFNMMKQKFGIEPEAGHFSCMIDLLG 492
Query: 376 RAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYIL 435
RAG++ +A +LIE +PF+P W +LLGACR H ++LA AA +LLQL+P NA PY++
Sbjct: 493 RAGKLSEAERLIETIPFDPGFFFWSALLGACRIHGNVELAIKAANRLLQLDPLNAAPYVM 552
Query: 436 LSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMR 495
L+NIY+ GR D A +RK MR R V K PGCSWIEV +++H+F D HPMI +
Sbjct: 553 LANIYSDNGRLQDAASVRKLMRDRGVKKKPGCSWIEVNRRIHIFVAEDTF----HPMIKK 608
Query: 496 MLEKIGGLLR---EAGYCPD--SSFVLHD--VDEEEKVHSLRYHSEKLAVAYGLVKLPEG 548
+ E + ++R + GY P+ S+ V D V + E+ L +HSEKLAV++GL+ EG
Sbjct: 609 IQEYLEEMMRKIKKVGYTPEVRSALVGGDDRVWQREEELRLGHHSEKLAVSFGLMSTREG 668
Query: 549 VPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
PI V KNLR+C DCH+AIK IS+V+ REI +RD++RFH FKDG CSC YW
Sbjct: 669 EPILVFKNLRICVDCHNAIKYISEVVKREITVRDSHRFHCFKDGQCSCGGYW 720
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 112/435 (25%), Positives = 209/435 (48%), Gaps = 44/435 (10%)
Query: 72 TNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEV 131
+ +L Y + R+ R +FD NV S+ T+IS Y + ++VA +LF+ MP+ + V
Sbjct: 47 NHFLLLYSKCRRLSAARRVFDHTHDCNVFSFNTLISAYAKESYVEVAHQLFDEMPQPDSV 106
Query: 132 SWTAMLMGYTQCGRIQDAWELF-----------------------------KAMPMKSVV 162
S+ ++ Y + G Q A++LF + + SVV
Sbjct: 107 SYNTLIAAYARRGDTQPAFQLFLEMREAFLDMDGFTLSGIITACGINVGLIRQLHALSVV 166
Query: 163 A--------SNSMILGLGQNGEVQKARVVFDQMRE-KDDATWSGMIKVYERKGYELEVID 213
N++I +NG +++AR +F + E +D+ +W+ M+ Y + + ++
Sbjct: 167 TGLDSYVSVGNALITSYSKNGFLKEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALE 226
Query: 214 LFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYI 273
L+ M G+ V+ +L SVL+ ++ L G Q HA+L++ + + +V S LI +Y
Sbjct: 227 LYLEMTVRGLIVDIFTLASVLTAFTNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYS 286
Query: 274 KCGE-LVKGKLIFDNFASKDIVMWNSIISGYAQY-GLGEKSLKVFHEMFSSGVMPDDVTL 331
KCG ++ + +FD ++ D+V+WN++ISGY+ Y L +++L+ F ++ G PDD +L
Sbjct: 287 KCGGCMLDCRKVFDEISNPDLVLWNTMISGYSLYEDLSDEALECFRQLQVVGHRPDDCSL 346
Query: 332 VGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMP 391
V V+SACS +GR++ + + ++ + + G + DA L + MP
Sbjct: 347 VCVISACSNMSSPSQGRQVHGLALKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMP 406
Query: 392 FEPDAIIWGSLLGACRTH-MKLDLAEVAAKKL-LQLEPKNAGPYILLSNIYASQGRFHDV 449
E + + + S++ H M + + L + P N +I + A GR D
Sbjct: 407 -EHNTVSYNSMIAGYAQHGMGFQSLHLFQRMLEMGFTPTNI-TFISVLAACAHTGRVEDG 464
Query: 450 AELRKNMRKRNVIKP 464
M+++ I+P
Sbjct: 465 KIYFNMMKQKFGIEP 479
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 68/138 (49%), Gaps = 8/138 (5%)
Query: 226 NFPSLI----SVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKG 281
+F SL+ L C + L G+ +HA ++ Y+++ + +Y KC L
Sbjct: 3 HFSSLLHNFRQFLKTCIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAA 62
Query: 282 KLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYT 341
+ +FD+ ++ +N++IS YA+ E ++V H++F PD V+ +++A +
Sbjct: 63 RRVFDHTHDCNVFSFNTLISAYAK----ESYVEVAHQLFDEMPQPDSVSYNTLIAAYARR 118
Query: 342 GKVKEGREIFESMKSKYL 359
G + ++F M+ +L
Sbjct: 119 GDTQPAFQLFLEMREAFL 136
>gi|356498743|ref|XP_003518209.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Glycine max]
Length = 573
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 218/545 (40%), Positives = 328/545 (60%), Gaps = 14/545 (2%)
Query: 66 KDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNR----IDVARKL 121
+D+V ++ Y Q +D+ +FD + ++ +W+ M+ G+ R+L
Sbjct: 33 QDLVIANKLLYTYAQHKAIDDAYSLFDGLTMRDSKTWSVMVGGFAKAGDHAGCYATFREL 92
Query: 122 FE--VMPEKNEVSW---TAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGE 176
V P+ + + T Q GR+ L + V + S++ +
Sbjct: 93 LRCGVTPDNYTLPFVIRTCRDRTDLQIGRVIHDVVLKHGLLSDHFVCA-SLVDMYAKCIV 151
Query: 177 VQKARVVFDQMREKDDATWSGMIKVY-ERKGYELEVIDLFTLMQKEGVRVNFPSLISVLS 235
V+ A+ +F++M KD TW+ MI Y + YE V LF M++EGV + ++++V++
Sbjct: 152 VEDAQRLFERMLSKDLVTWTVMIGAYADCNAYESLV--LFDRMREEGVVPDKVAMVTVVN 209
Query: 236 VCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVM 295
CA L ++ R + +VR F +DV + + +I MY KCG + + +FD K+++
Sbjct: 210 ACAKLGAMHRARFANDYIVRNGFSLDVILGTAMIDMYAKCGSVESAREVFDRMKEKNVIS 269
Query: 296 WNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMK 355
W+++I+ Y +G G+ ++ +FH M S ++P+ VT V +L ACS+ G ++EG F SM
Sbjct: 270 WSAMIAAYGYHGRGKDAIDLFHMMLSCAILPNRVTFVSLLYACSHAGLIEEGLRFFNSMW 329
Query: 356 SKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLA 415
++ V P +HY CMVDLLGRAG++++A++LIEAM E D +W +LLGACR H K++LA
Sbjct: 330 EEHAVRPDVKHYTCMVDLLGRAGRLDEALRLIEAMTVEKDERLWSALLGACRIHSKMELA 389
Query: 416 EVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKK 475
E AA LL+L+P+N G Y+LLSNIYA G++ VA+ R M +R + K PG +WIEV+ K
Sbjct: 390 EKAANSLLELQPQNPGHYVLLSNIYAKAGKWEKVAKFRDMMTQRKLKKIPGWTWIEVDNK 449
Query: 476 VHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEK 535
+ F+ D SHP+ I ML + L AGY PD+ FVL DV+EE K L HSEK
Sbjct: 450 TYQFSVGD-RSHPQSKEIYEMLMSLIKKLEMAGYVPDTDFVLQDVEEEVKQEMLYTHSEK 508
Query: 536 LAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCS 595
LA+A+GL+ +PEG PIR+ KNLRVCGDCH+ K++S +M R II+RDANRFHHF DG CS
Sbjct: 509 LAIAFGLIAIPEGEPIRISKNLRVCGDCHTFSKMVSSIMRRSIIVRDANRFHHFNDGTCS 568
Query: 596 CRDYW 600
C DYW
Sbjct: 569 CGDYW 573
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 119/256 (46%), Gaps = 11/256 (4%)
Query: 158 MKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTL 217
++ +V +N ++ Q+ + A +FD + +D TWS M+ + + G F
Sbjct: 32 LQDLVIANKLLYTYAQHKAIDDAYSLFDGLTMRDSKTWSVMVGGFAKAGDHAGCYATFRE 91
Query: 218 MQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGE 277
+ + GV + +L V+ C L GR +H +++ D +V + L+ MY KC
Sbjct: 92 LLRCGVTPDNYTLPFVIRTCRDRTDLQIGRVIHDVVLKHGLLSDHFVCASLVDMYAKCIV 151
Query: 278 LVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSA 337
+ + +F+ SKD+V W +I YA E SL +F M GV+PD V +V V++A
Sbjct: 152 VEDAQRLFERMLSKDLVTWTVMIGAYADCNAYE-SLVLFDRMREEGVVPDKVAMVTVVNA 210
Query: 338 CSYTGKVKEGREIFESMKSKYLVEPKTE----HYACMVDLLGRAGQVEDAMKLIEAMPFE 393
C+ G + R + Y+V M+D+ + G VE A ++ + M E
Sbjct: 211 CAKLGAMHRAR-----FANDYIVRNGFSLDVILGTAMIDMYAKCGSVESAREVFDRMK-E 264
Query: 394 PDAIIWGSLLGACRTH 409
+ I W +++ A H
Sbjct: 265 KNVISWSAMIAAYGYH 280
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 87/369 (23%), Positives = 156/369 (42%), Gaps = 55/369 (14%)
Query: 4 RNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMM 63
+++V ++ Y + I +A +LF + ++ +W+VM+GGF + F +
Sbjct: 33 QDLVIANKLLYTYAQHKAIDDAYSLFDGLTMRDSKTWSVMVGGFAKAGDHAGCYATFREL 92
Query: 64 PEKDVVAQTN---MVLGYCQDGRVDE--GREIFDEMPKKNVIS----WTTMISGYVNNNR 114
V V+ C+D R D GR I D + K ++S +++ Y
Sbjct: 93 LRCGVTPDNYTLPFVIRTCRD-RTDLQIGRVIHDVVLKHGLLSDHFVCASLVDMYAKCIV 151
Query: 115 IDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVA----------- 163
++ A++LFE M K+ V+WT M+ Y C + + LF M + VV
Sbjct: 152 VEDAQRLFERMLSKDLVTWTVMIGAYADCNAYE-SLVLFDRMREEGVVPDKVAMVTVVNA 210
Query: 164 ----------------------SNSMILG------LGQNGEVQKARVVFDQMREKDDATW 195
S +ILG + G V+ AR VFD+M+EK+ +W
Sbjct: 211 CAKLGAMHRARFANDYIVRNGFSLDVILGTAMIDMYAKCGSVESAREVFDRMKEKNVISW 270
Query: 196 SGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHG-RQVHAQLV 254
S MI Y G + IDLF +M + N + +S+L C+ ++ G R ++
Sbjct: 271 SAMIAAYGYHGRGKDAIDLFHMMLSCAILPNRVTFVSLLYACSHAGLIEEGLRFFNSMWE 330
Query: 255 RCQFDVDVYVASVLITMYIKCGELVKG-KLIFDNFASKDIVMWNSIISG---YAQYGLGE 310
DV + ++ + + G L + +LI KD +W++++ +++ L E
Sbjct: 331 EHAVRPDVKHYTCMVDLLGRAGRLDEALRLIEAMTVEKDERLWSALLGACRIHSKMELAE 390
Query: 311 KSLKVFHEM 319
K+ E+
Sbjct: 391 KAANSLLEL 399
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 79/163 (48%), Gaps = 6/163 (3%)
Query: 245 HGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYA 304
H RQVHA +V D+ +A+ L+ Y + + +FD +D W+ ++ G+A
Sbjct: 18 HIRQVHAHVVANGTLQDLVIANKLLYTYAQHKAIDDAYSLFDGLTMRDSKTWSVMVGGFA 77
Query: 305 QYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKT 364
+ G F E+ GV PD+ TL V+ C ++ GR I + + L+ +
Sbjct: 78 KAGDHAGCYATFRELLRCGVTPDNYTLPFVIRTCRDRTDLQIGRVIHDVVLKHGLL---S 134
Query: 365 EHYAC--MVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
+H+ C +VD+ + VEDA +L E M D + W ++GA
Sbjct: 135 DHFVCASLVDMYAKCIVVEDAQRLFERM-LSKDLVTWTVMIGA 176
Score = 47.4 bits (111), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 77/165 (46%), Gaps = 19/165 (11%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPE----KNVVSWTVMLGGFIRDSRIDDA 56
M E+NV+SW+AM+ Y G +A LF M N V++ +L I++
Sbjct: 262 MKEKNVISWSAMIAAYGYHGRGKDAIDLFHMMLSCAILPNRVTFVSLLYACSHAGLIEEG 321
Query: 57 RRLFDMMPEK-----DVVAQTNMVLGYCQDGRVDEGREIFDEMP-KKNVISWTTMISGYV 110
R F+ M E+ DV T MV + GR+DE + + M +K+ W+ ++
Sbjct: 322 LRFFNSMWEEHAVRPDVKHYTCMVDLLGRAGRLDEALRLIEAMTVEKDERLWSALLGACR 381
Query: 111 NNNRIDVARK----LFEVMPEKNEVSWTAMLMGYTQCGRIQDAWE 151
++++++A K L E+ P+ N + + Y + G+ WE
Sbjct: 382 IHSKMELAEKAANSLLELQPQ-NPGHYVLLSNIYAKAGK----WE 421
>gi|297611064|ref|NP_001065554.2| Os11g0109600 [Oryza sativa Japonica Group]
gi|255679703|dbj|BAF27399.2| Os11g0109600 [Oryza sativa Japonica Group]
Length = 1124
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 218/542 (40%), Positives = 329/542 (60%), Gaps = 19/542 (3%)
Query: 72 TNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVN----NNRIDVARKLFE--VM 125
T+++ Y + G + + +FDEMP + + WT +I+ Y++ + VAR F +
Sbjct: 589 TSLLSLYAKCGLLHRAQRVFDEMPHPSTVPWTALITAYMDAGDLREAVHVARNAFANGMR 648
Query: 126 PEKNEVSWTAMLMGYTQCGRIQD------AWELFKAMPM-KSVVASNSMILGLGQNGEVQ 178
P+ S+TA+ + T C RI D W + + +SV + + + + GE+
Sbjct: 649 PD----SFTAVRV-LTACARIADLATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMA 703
Query: 179 KARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCA 238
KAR VFD+MR KD W M+ Y G+ E +DLF MQ EG++ + ++ LS C
Sbjct: 704 KAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACT 763
Query: 239 SLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNS 298
L +LD GRQ + +F + + + LI MY KCG V+ ++F KDI++WN+
Sbjct: 764 RLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNA 823
Query: 299 IISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKY 358
+I G G + + + +M SGV +D T +G+L +C++TG +++GR F +M Y
Sbjct: 824 MILGLGMTGHEKIAFALVGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLY 883
Query: 359 LVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVA 418
+ P+ EHY CMVDLL RAG +++A +L++ MP +A+I G+LLG C+ H +LAE
Sbjct: 884 HISPRIEHYGCMVDLLSRAGLLQEAHQLVDDMPMPANAVILGALLGGCKIHRNTELAEHV 943
Query: 419 AKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHM 478
K+L+ LEP N+G Y++LSNIY+++GR+ D A+LR +M+ + V K P CSW+E E KVH
Sbjct: 944 LKQLILLEPWNSGNYVMLSNIYSNRGRWEDAAKLRLDMKAKGVEKVPACSWVEFEGKVHE 1003
Query: 479 FTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAV 538
F D SHP I + L+++G ++ GY P + V+ DV++EEK H+L +HSEKLA+
Sbjct: 1004 FRVGD-KSHPLSDQIYKKLDELGLEMKTMGYEPTTEVVMFDVEDEEKEHTLVHHSEKLAI 1062
Query: 539 AYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRD 598
A+ L+ G IRV KNLRVC DCH+AIKL+S++ REII+RD NRFH F+DG CSC D
Sbjct: 1063 AFNLLITGPGETIRVTKNLRVCSDCHTAIKLVSRITHREIIVRDNNRFHCFRDGSCSCND 1122
Query: 599 YW 600
YW
Sbjct: 1123 YW 1124
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 94/181 (51%), Gaps = 6/181 (3%)
Query: 228 PSLISVLSVCASLASLDH----GRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKL 283
PS +++ S + L H G Q+HA+ ++ + +V + L+++Y KCG L + +
Sbjct: 547 PSHLTIPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQR 606
Query: 284 IFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGK 343
+FD V W ++I+ Y G +++ V F++G+ PD T V VL+AC+
Sbjct: 607 VFDEMPHPSTVPWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIAD 666
Query: 344 VKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
+ G ++ + + + + + A VDL + G++ A ++ + M + DA+ WG+++
Sbjct: 667 LATGETVWRAAEQEGVAQSVFVATAA-VDLYVKCGEMAKAREVFDKMRHK-DAVAWGAMV 724
Query: 404 G 404
G
Sbjct: 725 G 725
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 95/441 (21%), Positives = 164/441 (37%), Gaps = 129/441 (29%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MP + V WTA++ Y++ G + EA + +N + + F + R+
Sbjct: 611 MPHPSTVPWTALITAYMDAGDLREAVHV-----ARNAFANGMRPDSFTAVRVLTACARIA 665
Query: 61 DMM--------PEKDVVAQTNMVLG-----YCQDGRVDEGREIFDEMPKKNVISWTTMIS 107
D+ E++ VAQ+ V Y + G + + RE+FD+M K+ ++W M+
Sbjct: 666 DLATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVG 725
Query: 108 GYVNNNRIDVARKLFEVMPEK--------------------------------------- 128
GY +N A LF M +
Sbjct: 726 GYASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLD 785
Query: 129 NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMR 188
N V TA++ Y +CG +AW +F+ M K ++ N+MILGLG G + A + Q
Sbjct: 786 NPVLGTALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQ-- 843
Query: 189 EKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQ 248
M+K GV++N + I +L C + GR+
Sbjct: 844 -----------------------------MEKSGVKLNDNTFIGLLCSCTHTGLIQDGRR 874
Query: 249 VHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGL 308
+ + +Y S I Y ++ ++ GL
Sbjct: 875 YFHNMTK------LYHISPRIEHY------------------------GCMVDLLSRAGL 904
Query: 309 GEKSLKVFHEMFSSGVMPDDVTLVG-VLSACSYTGKVKEGREIFES-MKSKYLVEP-KTE 365
L+ H++ MP + ++G +L C K+ E+ E +K L+EP +
Sbjct: 905 ----LQEAHQLVDDMPMPANAVILGALLGGC----KIHRNTELAEHVLKQLILLEPWNSG 956
Query: 366 HYACMVDLLGRAGQVEDAMKL 386
+Y + ++ G+ EDA KL
Sbjct: 957 NYVMLSNIYSNRGRWEDAAKL 977
>gi|15242550|ref|NP_196557.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170796|sp|Q9FIB2.1|PP373_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g09950
gi|9758973|dbj|BAB09416.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332004087|gb|AED91470.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 995
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 240/644 (37%), Positives = 361/644 (56%), Gaps = 54/644 (8%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVV 69
+V Y + G I +A +F+ M +K+ VSW M+ G ++ +A + M D++
Sbjct: 353 NGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDIL 412
Query: 70 AQTNMV---LGYCQDGR-VDEGREIFDEMPKK----NVISWTTMISGYVNNNRIDVARKL 121
+ + L C + G++I E K NV +++ Y ++ RK+
Sbjct: 413 PGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKI 472
Query: 122 FEVMPEKNEVSWTAMLMGYTQCGR-IQDAWELF--------------------------- 153
F MPE ++VSW +++ + R + +A F
Sbjct: 473 FSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSF 532
Query: 154 -------KAMPMKSVVAS-----NSMILGLGQNGEVQKARVVFDQMREK-DDATWSGMIK 200
+ +K+ +A N++I G+ GE+ +F +M E+ D+ TW+ MI
Sbjct: 533 GELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMIS 592
Query: 201 VYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDV 260
Y + +DL M + G R++ +VLS AS+A+L+ G +VHA VR +
Sbjct: 593 GYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLES 652
Query: 261 DVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMF 320
DV V S L+ MY KCG L F+ ++ WNS+ISGYA++G GE++LK+F M
Sbjct: 653 DVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMK 712
Query: 321 SSG-VMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQ 379
G PD VT VGVLSACS+ G ++EG + FESM Y + P+ EH++CM D+LGRAG+
Sbjct: 713 LDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGE 772
Query: 380 VEDAMKLIEAMPFEPDAIIWGSLLGAC--RTHMKLDLAEVAAKKLLQLEPKNAGPYILLS 437
++ IE MP +P+ +IW ++LGAC K +L + AA+ L QLEP+NA Y+LL
Sbjct: 773 LDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLG 832
Query: 438 NIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRML 497
N+YA+ GR+ D+ + RK M+ +V K G SW+ ++ VHMF D SHP+ +I + L
Sbjct: 833 NMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGD-KSHPDADVIYKKL 891
Query: 498 EKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGL-VKLPEGVPIRVMKN 556
+++ +R+AGY P + F L+D+++E K L YHSEKLAVA+ L + +PIR+MKN
Sbjct: 892 KELNRKMRDAGYVPQTGFALYDLEQENKEEILSYHSEKLAVAFVLAAQRSSTLPIRIMKN 951
Query: 557 LRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
LRVCGDCHSA K ISK+ GR+IILRD+NRFHHF+DG CSC D+W
Sbjct: 952 LRVCGDCHSAFKYISKIEGRQIILRDSNRFHHFQDGACSCSDFW 995
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 114/462 (24%), Positives = 199/462 (43%), Gaps = 63/462 (13%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDAR-RLFD 61
+++V ++ Y+E G A +F +MP +N VSW ++ G+ R+ +A L D
Sbjct: 33 DKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRD 92
Query: 62 MMPEKDVVAQTNM--VLGYCQD-GRVD--EGREIFDEMPK----KNVISWTTMISGYVNN 112
M+ E Q VL CQ+ G V GR+I M K + + +IS Y
Sbjct: 93 MVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKC 152
Query: 113 -NRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMP-------------- 157
+ A F + KN VSW +++ Y+Q G + A+ +F +M
Sbjct: 153 IGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSL 212
Query: 158 ---------------------------MKSVVASNSMILGLGQNGEVQKARVVFDQMREK 190
+ + + ++ ++G + AR VF+QM +
Sbjct: 213 VTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETR 272
Query: 191 DDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLS-----VCASLASLDH 245
+ T +G++ R+ + E LF M + V+ S + +LS A L
Sbjct: 273 NAVTLNGLMVGLVRQKWGEEATKLFMDMNSM-IDVSPESYVILLSSFPEYSLAEEVGLKK 331
Query: 246 GRQVHAQLVRCQF-DVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYA 304
GR+VH ++ D V + + L+ MY KCG + + +F KD V WNS+I+G
Sbjct: 332 GREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLD 391
Query: 305 QYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIF-ESMKSKYLVEPK 363
Q G ++++ + M ++P TL+ LS+C+ K G++I ES+K ++
Sbjct: 392 QNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLG--IDLN 449
Query: 364 TEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
++ L G + + K+ +MP E D + W S++GA
Sbjct: 450 VSVSNALMTLYAETGYLNECRKIFSSMP-EHDQVSWNSIIGA 490
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 90/363 (24%), Positives = 168/363 (46%), Gaps = 18/363 (4%)
Query: 58 RLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDV 117
RL+ +KDV N++ Y + G R++FDEMP +N +SW ++SGY N
Sbjct: 26 RLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKE 85
Query: 118 ARKLFEVMPEK----NEVSWTAMLMGYTQCGRI------QDAWELFKAMPMKSVVASNSM 167
A M ++ N+ ++ ++L + G + Q +FK V SN +
Sbjct: 86 ALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVL 145
Query: 168 ILGLGQN-GEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVN 226
I + G V A F + K+ +W+ +I VY + G + +F+ MQ +G R
Sbjct: 146 ISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPT 205
Query: 227 FPSLISVLSVCASLASLDHG--RQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLI 284
+ S+++ SL D Q+ + + D++V S L++ + K G L + +
Sbjct: 206 EYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKV 265
Query: 285 FDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSS-GVMPDD-VTLVGVLSACSYTG 342
F+ +++ V N ++ G + GE++ K+F +M S V P+ V L+ S
Sbjct: 266 FNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAE 325
Query: 343 KV--KEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWG 400
+V K+GRE+ + + LV+ +V++ + G + DA ++ M + D++ W
Sbjct: 326 EVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMT-DKDSVSWN 384
Query: 401 SLL 403
S++
Sbjct: 385 SMI 387
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 104/429 (24%), Positives = 193/429 (44%), Gaps = 35/429 (8%)
Query: 4 RNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDS---RIDDARRLF 60
+N VSW +++ Y + G A +F M G + + D R L
Sbjct: 169 KNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLE 228
Query: 61 DMMPE-------KDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNN 113
+M D+ + +V + + G + R++F++M +N ++ ++ G V
Sbjct: 229 QIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQK 288
Query: 114 RIDVARKLFEVMPEKNEVS---WTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMI-- 168
+ A KLF M +VS + +L + + ++ L K + V + ++
Sbjct: 289 WGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEV-GLKKGREVHGHVITTGLVDF 347
Query: 169 -LGLGQN--------GEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQ 219
+G+G G + AR VF M +KD +W+ MI ++ G +E ++ + M+
Sbjct: 348 MVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMR 407
Query: 220 KEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELV 279
+ + +LIS LS CASL G+Q+H + ++ D++V V++ L+T+Y + G L
Sbjct: 408 RHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLN 467
Query: 280 KGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLK----VFHEMFSSGVMPDDVTLVGVL 335
+ + IF + D V WNSII A+ E+SL F +G + +T VL
Sbjct: 468 ECRKIFSSMPEHDQVSWNSIIGALAR---SERSLPEAVVCFLNAQRAGQKLNRITFSSVL 524
Query: 336 SACSYTGKVKEGREIFE-SMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEP 394
SA S + G++I ++K+ E TE+ ++ G+ G+++ K+ M
Sbjct: 525 SAVSSLSFGELGKQIHGLALKNNIADEATTEN--ALIACYGKCGEMDGCEKIFSRMAERR 582
Query: 395 DAIIWGSLL 403
D + W S++
Sbjct: 583 DNVTWNSMI 591
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 62/120 (51%), Gaps = 3/120 (2%)
Query: 246 GRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQ 305
R H++L + + D DVY+ + LI Y++ G+ V + +FD ++ V W I+SGY++
Sbjct: 20 ARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSR 79
Query: 306 YGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVK--EGREIFESM-KSKYLVEP 362
G +++L +M G+ + V VL AC G V GR+I M K Y V+
Sbjct: 80 NGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDA 139
>gi|347954526|gb|AEP33763.1| organelle transcript processing 82, partial [Isatis tinctoria]
Length = 671
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 226/570 (39%), Positives = 342/570 (60%), Gaps = 11/570 (1%)
Query: 41 TVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVI 100
T ++ ++++ R++DA ++FD +DVV+ T ++ GY G + +++FDE+P K+V+
Sbjct: 103 TSLISMYVQNWRLEDAYKVFDRSSHRDVVSYTALITGYASRGDIRSAQKLFDEIPVKDVV 162
Query: 101 SWTTMISGYVNNNRIDVARKLFEVMPEKN----EVSWTAMLMGYTQCGRIQDAWELFKAM 156
SW MISGY A +LFE M + N E ++ +L G I+ ++ +
Sbjct: 163 SWNAMISGYAETGCYKEALELFEEMMKMNVRPDESTYVTVLSACAHSGSIELGRQVHSWV 222
Query: 157 PMKSVVAS----NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVI 212
++ N++I + GEV+ A +F + KD +W+ +I Y E +
Sbjct: 223 DDHGFDSNLKIVNALIDLYSKCGEVETACGLFQGLSYKDVISWNTLIGGYTHMNLYKEAL 282
Query: 213 DLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVD--VYVASVLIT 270
LF M + G N +++SVL CA L ++D GR +H + + V + + LI
Sbjct: 283 LLFQEMLRSGETPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLID 342
Query: 271 MYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVT 330
MY KCG++ +F++ K + WN++I G+A +G + S +F M G+ PDD+T
Sbjct: 343 MYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIEPDDIT 402
Query: 331 LVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAM 390
VG+LSACS++G + GR IF SM Y + PK EHY CM+DLLG +G ++A ++I M
Sbjct: 403 FVGLLSACSHSGMLDLGRHIFRSMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINTM 462
Query: 391 PFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVA 450
EPD +IW SLL AC+ H ++LAE A+ L+++EP+N YILLSNIYAS GR+ DVA
Sbjct: 463 EMEPDGVIWCSLLKACKMHGNVELAESFAQNLIKIEPENPSSYILLSNIYASAGRWEDVA 522
Query: 451 ELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYC 510
+R + + + K PGCS IEV+ V F D HP++ I MLE++ LL EAG+
Sbjct: 523 RIRALLNGKCMKKVPGCSSIEVDSVVFEFVVGDKF-HPQNREIYGMLEEMEVLLEEAGFV 581
Query: 511 PDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLI 570
PD+S VL +++EE K +LR+HSEKLA+A+GL+ G + ++KNLRVC +CH A KL+
Sbjct: 582 PDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLL 641
Query: 571 SKVMGREIILRDANRFHHFKDGLCSCRDYW 600
SK+ REI+ RD RFHHF+DG+CSC DYW
Sbjct: 642 SKIYKREIVARDRTRFHHFRDGVCSCNDYW 671
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 134/264 (50%), Gaps = 34/264 (12%)
Query: 180 ARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCAS 239
A VF+ ++E + W+ MI+ + + + L+ M G+ N + +L CA
Sbjct: 17 ATSVFETIQEPNQLIWNTMIRGHALSSDPVSSLTLYVCMVSLGLLPNSYTFPFLLKSCAK 76
Query: 240 LASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKC------------------------ 275
+ G+Q+H Q+++ FD+D+YV + LI+MY++
Sbjct: 77 SKTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRSSHRDVVSYTAL 136
Query: 276 -------GELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDD 328
G++ + +FD KD+V WN++ISGYA+ G +++L++F EM V PD+
Sbjct: 137 ITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMKMNVRPDE 196
Query: 329 VTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIE 388
T V VLSAC+++G ++ GR++ S + + + ++DL + G+VE A L +
Sbjct: 197 STYVTVLSACAHSGSIELGRQV-HSWVDDHGFDSNLKIVNALIDLYSKCGEVETACGLFQ 255
Query: 389 AMPFEPDAIIWGSLLGACRTHMKL 412
+ ++ D I W +L+G THM L
Sbjct: 256 GLSYK-DVISWNTLIGG-YTHMNL 277
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 99/407 (24%), Positives = 170/407 (41%), Gaps = 59/407 (14%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV----VSWTVMLGGFIRDSRIDDA 56
+P ++VVSW AM+ GY E G EA LF +M + NV ++ +L I+
Sbjct: 156 IPVKDVVSWNAMISGYAETGCYKEALELFEEMMKMNVRPDESTYVTVLSACAHSGSIELG 215
Query: 57 RRLFDMMPEKDVVAQTNMVLG----YCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
R++ + + + +V Y + G V+ +F + K+VISW T+I GY +
Sbjct: 216 RQVHSWVDDHGFDSNLKIVNALIDLYSKCGEVETACGLFQGLSYKDVISWNTLIGGYTHM 275
Query: 113 NRIDVARKLFEVM----PEKNEVSWTAMLMGYTQCGRIQ-DAW-ELFKAMPMKSVVASNS 166
N A LF+ M N+V+ ++L G I W ++ +K V ++S
Sbjct: 276 NLYKEALLLFQEMLRSGETPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNASS 335
Query: 167 MILGL----GQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEG 222
+ L + G+++ A VF+ M K ++W+ MI + G DLF+ M+K G
Sbjct: 336 LRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIG 395
Query: 223 VRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGK 282
+ + + + +LS C+ LD GR + + +
Sbjct: 396 IEPDDITFVGLLSACSHSGMLDLGRHIFRSMTQ--------------------------- 428
Query: 283 LIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVM-PDDVTLVGVLSACSYT 341
D + + + +I GL K EM ++ M PD V +L AC
Sbjct: 429 ---DYKMTPKLEHYGCMIDLLGHSGL----FKEAEEMINTMEMEPDGVIWCSLLKACKMH 481
Query: 342 GKVKEGREIFESMKSKYL-VEPKT-EHYACMVDLLGRAGQVEDAMKL 386
G V E+ ES + +EP+ Y + ++ AG+ ED ++
Sbjct: 482 GNV----ELAESFAQNLIKIEPENPSSYILLSNIYASAGRWEDVARI 524
>gi|357453927|ref|XP_003597244.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355486292|gb|AES67495.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 678
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 237/612 (38%), Positives = 345/612 (56%), Gaps = 17/612 (2%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVV----SWTVMLGGFIRDSRIDDA---- 56
N + M+RG V + A L+ M + +V +++ +L R +
Sbjct: 68 NTFLYNTMIRGMVSKDRFNNAVHLYASMHKAAIVPDSFTFSFVLKACARLNLFHLGVMIH 127
Query: 57 RRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNR-- 114
+F + DV +TN+V Y + G + + ++FD+M KNV+SWT MI G + +
Sbjct: 128 SLVFKTGFDCDVFVKTNVVCFYSKCGFLRDAWKVFDDMVVKNVVSWTGMICGCIEFGKFR 187
Query: 115 --IDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMP----MKSVVASNSMI 168
+D+ R L E + +L + G ++ + + M ++V + S++
Sbjct: 188 EAVDLFRGLLESGLRPDGFVIVRVLRACARLGDLESGRWIDRCMRECGLSRNVFVATSLV 247
Query: 169 LGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFP 228
+ G +++AR VFD M EKD WS MI+ Y G E I+LF M+K VR +
Sbjct: 248 DMYTKCGSMEEARFVFDGMVEKDIVCWSAMIQGYASNGLPREAIELFFEMRKVNVRPDCY 307
Query: 229 SLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNF 288
+++ LS CASL +L+ G + +F + + + LI Y KCG + + ++
Sbjct: 308 AMVGALSSCASLGALELGNWAKGLMNYEEFLSNPVLGTSLIDFYAKCGSMEEALGVYKMM 367
Query: 289 ASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGR 348
KD V++N++ISG A YG + VF +M G+ P++ T VG+L C++ G V +GR
Sbjct: 368 KEKDRVVFNAVISGLAMYGQVGAAFGVFGQMGKFGIPPNEHTFVGLLCGCTHAGLVDDGR 427
Query: 349 EIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRT 408
F SM + V P EHY CMVDLL RAG +++A LI+ MP + + I+WGSLLG CR
Sbjct: 428 HYFNSMSHDFSVTPTIEHYGCMVDLLARAGFLDEAHNLIKGMPMKANVIVWGSLLGGCRL 487
Query: 409 HMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCS 468
H + LAE K+L++LEP N+G Y+LLSNIY++ R+ + ++R + ++ + K PG S
Sbjct: 488 HRETQLAEHVLKQLIELEPWNSGHYVLLSNIYSASRRWDEAEKIRSTVNEKGMQKLPGYS 547
Query: 469 WIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHS 528
W+EV+ VH F D SHP I LE + L+EAGY P + FVL DV+EEEK H
Sbjct: 548 WVEVDGVVHEFLVGD-TSHPLSQKIYEKLESLFKDLKEAGYNPTTEFVLFDVEEEEKEHF 606
Query: 529 LRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHH 588
L HSEKLAVA+ L+ IRV+KNLRVCGDCH AIK ISKV GREI++RD NRFH
Sbjct: 607 LGCHSEKLAVAFALISTGAKYVIRVVKNLRVCGDCHEAIKHISKVTGREIVIRDNNRFHC 666
Query: 589 FKDGLCSCRDYW 600
F DG CSCRDYW
Sbjct: 667 FSDGACSCRDYW 678
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 85/347 (24%), Positives = 145/347 (41%), Gaps = 35/347 (10%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKN----------VVSWTVMLGGFIRD 50
M +NVVSWT M+ G +E G EA LF + E V+ LG
Sbjct: 165 MVVKNVVSWTGMICGCIEFGKFREAVDLFRGLLESGLRPDGFVIVRVLRACARLGDLESG 224
Query: 51 SRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYV 110
ID R + ++V T++V Y + G ++E R +FD M +K+++ W+ MI GY
Sbjct: 225 RWIDRCMR--ECGLSRNVFVATSLVDMYTKCGSMEEARFVFDGMVEKDIVCWSAMIQGYA 282
Query: 111 NNNRIDVARKLFEVMPEKN-EVSWTAMLMGYTQCGRIQD-----------AWELFKAMPM 158
+N A +LF M + N AM+ + C + +E F + P
Sbjct: 283 SNGLPREAIELFFEMRKVNVRPDCYAMVGALSSCASLGALELGNWAKGLMNYEEFLSNP- 341
Query: 159 KSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLM 218
V S+I + G +++A V+ M+EKD ++ +I G +F M
Sbjct: 342 ---VLGTSLIDFYAKCGSMEEALGVYKMMKEKDRVVFNAVISGLAMYGQVGAAFGVFGQM 398
Query: 219 QKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVA--SVLITMYIKCG 276
K G+ N + + +L C +D GR + F V + ++ + + G
Sbjct: 399 GKFGIPPNEHTFVGLLCGCTHAGLVDDGRHYFNSMSH-DFSVTPTIEHYGCMVDLLARAG 457
Query: 277 ELVKGKLIFDNFASK-DIVMWNSIISG---YAQYGLGEKSLKVFHEM 319
L + + K ++++W S++ G + + L E LK E+
Sbjct: 458 FLDEAHNLIKGMPMKANVIVWGSLLGGCRLHRETQLAEHVLKQLIEL 504
>gi|225447376|ref|XP_002274886.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 736
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 221/614 (35%), Positives = 349/614 (56%), Gaps = 18/614 (2%)
Query: 4 RNVVSWTAMVRGYVEEGMITEAGTLFWQM----PEKNVVSWTVMLGGFIRDSRIDDARRL 59
+N W M+RGY G+ ++ L+ +M + ++ +L ++ RR+
Sbjct: 124 KNSFLWNFMIRGYASNGLPMKSLVLYREMLCFGQRADNFTYPFVLKACGDLLLVEIGRRV 183
Query: 60 FDMMP----EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRI 115
+ E D+ +++ Y + G + R +FD M ++++ SW TMISGY N
Sbjct: 184 HSEVVVCGLESDIYVGNSLLAMYAKFGDMGTARMVFDRMAERDLTSWNTMISGYAKNADS 243
Query: 116 DVARKLFEVMPEKNEVSWTAMLMGY-TQC--------GRIQDAWELFKAMPMKSVVASNS 166
A +F++M + + L+G + C G++ + + ++ + +NS
Sbjct: 244 GTAFLVFDLMGKAGLFADCTTLLGLLSACADLKAVKEGKVIHGYAVRNSIGNYNKFFTNS 303
Query: 167 MILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVN 226
+I + AR +F+++R KD +W+ MI Y R G E + LF M +G +
Sbjct: 304 LIEMYCNCNCMVDARRLFERVRWKDTVSWNSMILGYARNGDAFESLRLFRRMALDGSGPD 363
Query: 227 FPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFD 286
+ I+VL C +A+L +G +H+ LV+ FD + V + L+ MY KCG L + +FD
Sbjct: 364 QVTFIAVLGACDQIAALRYGMSIHSYLVKKGFDANTIVGTALVDMYSKCGSLACSRRVFD 423
Query: 287 NFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKE 346
K +V W+++++GY +G G +++ + M ++ V+PD+ +LSACS+ G V E
Sbjct: 424 EMPDKSLVSWSAMVAGYGLHGRGREAISILDGMKANSVIPDNGVFTSILSACSHAGLVVE 483
Query: 347 GREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGAC 406
G+EIF M+ +Y V+P HY+CMVDLLGRAG +++A +I M +P + IW +LL A
Sbjct: 484 GKEIFYKMEKEYNVKPALSHYSCMVDLLGRAGHLDEAYVIIRTMEIKPTSDIWAALLTAS 543
Query: 407 RTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPG 466
R H + LAE++A+K+ + PK YI LSNIYA++ R+ DV +R +R++ + K PG
Sbjct: 544 RLHKNIKLAEISAQKVFDMNPKVVSSYICLSNIYAAEKRWDDVERVRAMVRRKGLKKSPG 603
Query: 467 CSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKV 526
CS+IE++ VH F D SH + I L ++ L+EAGY PD+S V +DV+EE K
Sbjct: 604 CSFIELDNMVHRFLVGD-KSHQQTEDIYAKLNELKQQLKEAGYKPDTSLVFYDVEEEVKE 662
Query: 527 HSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRF 586
L HSE+LA+A+ L+ G IR+ KNLRVCGDCH+ KLIS++ GREII+RD +RF
Sbjct: 663 KMLWDHSERLAIAFALINTGPGTVIRITKNLRVCGDCHTVTKLISELTGREIIMRDIHRF 722
Query: 587 HHFKDGLCSCRDYW 600
HHF G CSC DYW
Sbjct: 723 HHFIKGFCSCGDYW 736
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 87/311 (27%), Positives = 148/311 (47%), Gaps = 39/311 (12%)
Query: 135 AMLMGYTQCGRIQDAWELFKAMPMKSVVASNS-----MILGLGQNGEVQKARVVFDQMRE 189
A+L +T + +L M S++ +N+ + G + +A V+FD +
Sbjct: 64 ALLQSFTNTKSFKQGQQLHAHMISFSILENNTYLNTKLAAFYAGCGLMSQAEVIFDGIVL 123
Query: 190 KDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQV 249
K+ W+ MI+ Y G ++ + L+ M G R + + VL C L ++ GR+V
Sbjct: 124 KNSFLWNFMIRGYASNGLPMKSLVLYREMLCFGQRADNFTYPFVLKACGDLLLVEIGRRV 183
Query: 250 HAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLG 309
H+++V C + D+YV + L+ MY K G++ +++FD A +D+ WN++ISGYA+
Sbjct: 184 HSEVVVCGLESDIYVGNSLLAMYAKFGDMGTARMVFDRMAERDLTSWNTMISGYAKNADS 243
Query: 310 EKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFE-------SMKSKYLVEP 362
+ VF M +G+ D TL+G+LSAC+ VKEG+ I +K+
Sbjct: 244 GTAFLVFDLMGKAGLFADCTTLLGLLSACADLKAVKEGKVIHGYAVRNSIGNYNKFFTNS 303
Query: 363 KTEHYA---CMVD-------------------LLG--RAGQVEDAMKLIEAMPFE---PD 395
E Y CMVD +LG R G ++++L M + PD
Sbjct: 304 LIEMYCNCNCMVDARRLFERVRWKDTVSWNSMILGYARNGDAFESLRLFRRMALDGSGPD 363
Query: 396 AIIWGSLLGAC 406
+ + ++LGAC
Sbjct: 364 QVTFIAVLGAC 374
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/299 (21%), Positives = 128/299 (42%), Gaps = 48/299 (16%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDM 62
E ++ +++ Y + G + A +F +M E+++ SW M+ G+ +++ A +FD+
Sbjct: 193 ESDIYVGNSLLAMYAKFGDMGTARMVFDRMAERDLTSWNTMISGYAKNADSGTAFLVFDL 252
Query: 63 MPEKDVVAQTNMVLGY---CQD------GRVDEGREIFDEMPKKNVISWTTMISGYVNNN 113
M + + A +LG C D G+V G + + + N ++I Y N N
Sbjct: 253 MGKAGLFADCTTLLGLLSACADLKAVKEGKVIHGYAVRNSIGNYNKFFTNSLIEMYCNCN 312
Query: 114 RIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPM--------------- 158
+ AR+LFE + K+ VSW +M++GY + G ++ LF+ M +
Sbjct: 313 CMVDARRLFERVRWKDTVSWNSMILGYARNGDAFESLRLFRRMALDGSGPDQVTFIAVLG 372
Query: 159 ------------------------KSVVASNSMILGLGQNGEVQKARVVFDQMREKDDAT 194
+ + +++ + G + +R VFD+M +K +
Sbjct: 373 ACDQIAALRYGMSIHSYLVKKGFDANTIVGTALVDMYSKCGSLACSRRVFDEMPDKSLVS 432
Query: 195 WSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQL 253
WS M+ Y G E I + M+ V + S+LS C+ + G+++ ++
Sbjct: 433 WSAMVAGYGLHGRGREAISILDGMKANSVIPDNGVFTSILSACSHAGLVVEGKEIFYKM 491
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 116/273 (42%), Gaps = 52/273 (19%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVS-WTVMLG-------------- 45
M ER++ SW M+ GY + A +F M + + + T +LG
Sbjct: 222 MAERDLTSWNTMISGYAKNADSGTAFLVFDLMGKAGLFADCTTLLGLLSACADLKAVKEG 281
Query: 46 ----------------GFIRDSRID---------DARRLFDMMPEKDVVAQTNMVLGYCQ 80
F +S I+ DARRLF+ + KD V+ +M+LGY +
Sbjct: 282 KVIHGYAVRNSIGNYNKFFTNSLIEMYCNCNCMVDARRLFERVRWKDTVSWNSMILGYAR 341
Query: 81 DGRVDEGREIFDEMP-KKNVISWTTMISGYVNNNRIDVARKLFEVMP-------EKNEVS 132
+G E +F M + T I+ ++I R + + N +
Sbjct: 342 NGDAFESLRLFRRMALDGSGPDQVTFIAVLGACDQIAALRYGMSIHSYLVKKGFDANTIV 401
Query: 133 WTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREK-- 190
TA++ Y++CG + + +F MP KS+V+ ++M+ G G +G ++A + D M+
Sbjct: 402 GTALVDMYSKCGSLACSRRVFDEMPDKSLVSWSAMVAGYGLHGRGREAISILDGMKANSV 461
Query: 191 --DDATWSGMIKVYERKGYELEVIDLFTLMQKE 221
D+ ++ ++ G +E ++F M+KE
Sbjct: 462 IPDNGVFTSILSACSHAGLVVEGKEIFYKMEKE 494
>gi|357134267|ref|XP_003568739.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Brachypodium distachyon]
Length = 818
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 230/626 (36%), Positives = 358/626 (57%), Gaps = 43/626 (6%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMP----EKNVVSWTVMLGGFIRDSRIDDARR 58
ER V WT ++ YV+ G ++ LF M E + S + M+ + ++
Sbjct: 208 ERTSVVWTLLITRYVQAGCASKVVELFLHMLDDGFEPDGYSMSSMISACTELGSVRLGQQ 267
Query: 59 LFDMMPEKDVVAQTNMVLGYCQ-------DGRVDEGREIFDEMPKKNVISWTTMISGYVN 111
L + +V+ + + G + ++ R++F MP+ NV+SWT +ISGYV
Sbjct: 268 LHSVALRLGLVSDSCVSCGLVDMYAKLKMERSMEHARKVFKTMPRHNVMSWTALISGYVQ 327
Query: 112 -----NNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRI--QDAWELFKAMPMKSVVA- 163
NN + + R++ N ++++ +L C + QD+ A +K+ +A
Sbjct: 328 SGVQENNVMALFREMLNESIRPNHITYSNLLKA---CANLSDQDSGRQIHAHVLKTSIAH 384
Query: 164 ----SNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQ 219
N+++ ++G +++AR FDQ+ E + + S ++ ER +
Sbjct: 385 VNVVGNALVSMYAESGCMEEARKAFDQLYETNILSMSPDVET-ERNNASCSS-------K 436
Query: 220 KEGVR--VNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGE 277
EG+ V+ + S+LS AS+ L G+++HA ++ F D +++ L++MY +CG
Sbjct: 437 IEGMDDGVSTFTFASLLSAAASVGLLTKGQKLHALSMKAGFRSDQGISNSLVSMYARCGY 496
Query: 278 LVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSA 337
L FD +++ W SIISG A++G +++L +FH+M +GV P+DVT + VLSA
Sbjct: 497 LEDACRAFDEMKDHNVISWTSIISGLAKHGYAKQALSMFHDMILAGVKPNDVTYIAVLSA 556
Query: 338 CSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAI 397
CS+ G VKEG+E F SM+ + + P+ EHYAC+VDLL R+G VE+A + I MP + DA+
Sbjct: 557 CSHVGLVKEGKEHFRSMQKDHGLLPRMEHYACIVDLLARSGLVEEARQFINEMPCKADAL 616
Query: 398 IWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMR 457
+W +LL ACRT+ ++ E+AA ++ LEP++ PY+LLSN+YA G + +VA +R MR
Sbjct: 617 VWKTLLSACRTYGNTEIGEIAANHVINLEPRDPAPYVLLSNLYADAGLWDEVARIRSLMR 676
Query: 458 KRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLRE---AGYCPDSS 514
+N+ K G SW++V +H F D HP+ + + K+ L+RE GY PD+S
Sbjct: 677 DKNLSKETGLSWMDVGNTIHEFRAGD----TSHPLAIDIYAKLVTLIREIKDIGYVPDTS 732
Query: 515 FVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVM 574
VLHD+ EE K L HSEK+AVA+GL+ P+R+ KNLRVC DCHSAIK ISK
Sbjct: 733 IVLHDMSEELKEQYLLQHSEKIAVAFGLITTSATKPMRIFKNLRVCADCHSAIKYISKST 792
Query: 575 GREIILRDANRFHHFKDGLCSCRDYW 600
GREIILRD+NRFH KDG+CSC +YW
Sbjct: 793 GREIILRDSNRFHRMKDGICSCGEYW 818
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 118/250 (47%), Gaps = 10/250 (4%)
Query: 161 VVASNSMILGLGQNGEVQKARVVFDQM-REKDDATWSGMIKVYERKGYELEVIDLFTLMQ 219
V +NS++ + G V+ AR VFDQM +D +W+ M R G E E + L M
Sbjct: 76 AVVANSLLTMYSKCGAVEAARRVFDQMCGVRDLVSWTAMASCLARNGAERESLRLLGEML 135
Query: 220 KEGVRVNFPSLISVLSVC--ASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGE 277
+ G+R N +L + C L L G + L + DV V LI M+ + G+
Sbjct: 136 ELGLRPNAFTLCAAARACFPQELFRLAGGVVLGFVLKTGFWGTDVSVGCALIDMFARNGD 195
Query: 278 LVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSA 337
LV + +FD + V+W +I+ Y Q G K +++F M G PD ++ ++SA
Sbjct: 196 LVAAQRVFDGLIERTSVVWTLLITRYVQAGCASKVVELFLHMLDDGFEPDGYSMSSMISA 255
Query: 338 CSYTGKVKEGREIFESMKSKYLVEPKTEHYAC-MVDLLGRAG---QVEDAMKLIEAMPFE 393
C+ G V+ G+++ LV +C +VD+ + +E A K+ + MP
Sbjct: 256 CTELGSVRLGQQLHSVALRLGLVSDSC--VSCGLVDMYAKLKMERSMEHARKVFKTMP-R 312
Query: 394 PDAIIWGSLL 403
+ + W +L+
Sbjct: 313 HNVMSWTALI 322
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 72/332 (21%), Positives = 154/332 (46%), Gaps = 31/332 (9%)
Query: 1 MPERNVVSWTAMVRGYVEEGMI-TEAGTLFWQMPEKNV----VSWTVMLGGFIRDSRIDD 55
MP NV+SWTA++ GYV+ G+ LF +M +++ ++++ +L S D
Sbjct: 310 MPRHNVMSWTALISGYVQSGVQENNVMALFREMLNESIRPNHITYSNLLKACANLSDQDS 369
Query: 56 ARRLFDMMPEKDV----VAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVN 111
R++ + + + V +V Y + G ++E R+ FD++ + N++S + + N
Sbjct: 370 GRQIHAHVLKTSIAHVNVVGNALVSMYAESGCMEEARKAFDQLYETNILSMSPDVETERN 429
Query: 112 NNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVV-----ASNS 166
N + K+ + + ++ ++L G + +L A+ MK+ SNS
Sbjct: 430 N--ASCSSKIEGMDDGVSTFTFASLLSAAASVGLLTKGQKL-HALSMKAGFRSDQGISNS 486
Query: 167 MILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVN 226
++ + G ++ A FD+M++ + +W+ +I + GY + + +F M GV+ N
Sbjct: 487 LVSMYARCGYLEDACRAFDEMKDHNVISWTSIISGLAKHGYAKQALSMFHDMILAGVKPN 546
Query: 227 FPSLISVLSVCASLASLDHGRQV-------HAQLVRCQFDVDVYVASVLITMYIKCGELV 279
+ I+VLS C+ + + G++ H L R + + ++ + + G +
Sbjct: 547 DVTYIAVLSACSHVGLVKEGKEHFRSMQKDHGLLPRMEH------YACIVDLLARSGLVE 600
Query: 280 KGKLIFDNFASK-DIVMWNSIISGYAQYGLGE 310
+ + + K D ++W +++S YG E
Sbjct: 601 EARQFINEMPCKADALVWKTLLSACRTYGNTE 632
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 87/175 (49%), Gaps = 6/175 (3%)
Query: 233 VLSVCASLASLDHGRQVHAQLVRCQ-FDVDVYVASVLITMYIKCGELVKGKLIFDNFAS- 290
+L+ A L GR +H +L+R + D D VA+ L+TMY KCG + + +FD
Sbjct: 46 LLTSAARAGDLRLGRALHRRLLRSEILDTDAVVANSLLTMYSKCGAVEAARRVFDQMCGV 105
Query: 291 KDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSAC--SYTGKVKEGR 348
+D+V W ++ S A+ G +SL++ EM G+ P+ TL AC ++ G
Sbjct: 106 RDLVSWTAMASCLARNGAERESLRLLGEMLELGLRPNAFTLCAAARACFPQELFRLAGGV 165
Query: 349 EIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
+ +K+ + + A ++D+ R G + A ++ + + E +++W L+
Sbjct: 166 VLGFVLKTGFWGTDVSVGCA-LIDMFARNGDLVAAQRVFDGL-IERTSVVWTLLI 218
>gi|77551591|gb|ABA94388.1| PPR986-12, putative, expressed [Oryza sativa Japonica Group]
Length = 694
Score = 417 bits (1071), Expect = e-113, Method: Compositional matrix adjust.
Identities = 233/622 (37%), Positives = 346/622 (55%), Gaps = 28/622 (4%)
Query: 2 PERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRL-- 59
P VVS+TA + G + G A + F M + + + R
Sbjct: 78 PHPTVVSYTAFISGAAQHGRPLPALSAFAGMLRLGLRPNDFTFPSAFKAAASAPPRSTIG 137
Query: 60 ---------FDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYV 110
F +P V+ + + Y + GR+ R +F EMP +NV++W +++ V
Sbjct: 138 PQIHSLAIRFGYLPVDPFVSCAALDM-YFKTGRLKLARHLFGEMPNRNVVAWNAVMTNAV 196
Query: 111 NNNR----IDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQ--DAWELFKAMPMK----- 159
+ R I+ L E N VS A + C E F +K
Sbjct: 197 LDGRPLETIEAYFGLREAGGLPNVVSACAF---FNACAGAMYLSLGEQFHGFVVKCGFEM 253
Query: 160 SVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQ 219
V NSM+ G+ KAR VFD M ++ +W M+ Y + G E E + +
Sbjct: 254 DVSVLNSMVDFYGKCRCAGKARAVFDGMGVRNSVSWCSMVAAYAQNGAEEEAFAAYLGAR 313
Query: 220 KEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELV 279
+ G + S L+ CA L L GR +HA VR D +++VAS L+ MY KCG +
Sbjct: 314 RSGEEPTDFMVSSALTTCAGLLGLHLGRALHAVAVRSCIDANIFVASALVDMYGKCGCVE 373
Query: 280 KGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSG-VMPDDVTLVGVLSAC 338
+ IF +++V WN++I GYA G + +L VF +M SG P+ +TLV V+++C
Sbjct: 374 DAEQIFYETPQRNLVTWNAMIGGYAHIGDAQNALLVFDDMIRSGETAPNYITLVNVITSC 433
Query: 339 SYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAII 398
S G K+G E+FE+M+ ++ +EP+TEHYAC+VDLLGRAG E A ++I+ MP P +
Sbjct: 434 SRGGLTKDGYELFETMRERFGIEPRTEHYACVVDLLGRAGMEEQAYEVIQGMPMRPSISV 493
Query: 399 WGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRK 458
WG+LLGAC+ H K +L +AA+KL +L+P+++G ++LLSN++AS GR+ + ++RK M+
Sbjct: 494 WGALLGACKMHGKTELGRIAAEKLFELDPQDSGNHVLLSNMFASAGRWAEATDIRKEMKN 553
Query: 459 RNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLH 518
+ K PGCSW+ + VH+F +D H + I +L K+ ++ AGY PD+ + L+
Sbjct: 554 VGIKKDPGCSWVTWKNVVHVFRAKD-TKHEMYNEIQALLSKLRKQMQAAGYMPDTQYSLY 612
Query: 519 DVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREI 578
D++EEEK + HSEKLA+A+GL+ +P GVPIR+MKNLR+C DCH A K IS ++GREI
Sbjct: 613 DLEEEEKESEVFQHSEKLALAFGLICIPPGVPIRIMKNLRICVDCHRAFKFISGIVGREI 672
Query: 579 ILRDANRFHHFKDGLCSCRDYW 600
I+RD NRFHHFK CSC DYW
Sbjct: 673 IVRDNNRFHHFKQYQCSCGDYW 694
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 107/272 (39%), Gaps = 52/272 (19%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEK----NVVSWTVMLGGFIRDSRIDDA 56
MP RNVV+W A++ V +G E ++ + E NVVS +
Sbjct: 180 MPNRNVVAWNAVMTNAVLDGRPLETIEAYFGLREAGGLPNVVSACAFFNACAGAMYLSLG 239
Query: 57 RRLFDMMP----EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+ + E DV +MV Y + + R +FD M +N +SW +M++ Y N
Sbjct: 240 EQFHGFVVKCGFEMDVSVLNSMVDFYGKCRCAGKARAVFDGMGVRNSVSWCSMVAAYAQN 299
Query: 113 NR-----------------------------------IDVARKLFEVMP----EKNEVSW 133
+ + R L V + N
Sbjct: 300 GAEEEAFAAYLGARRSGEEPTDFMVSSALTTCAGLLGLHLGRALHAVAVRSCIDANIFVA 359
Query: 134 TAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQM-REKDD 192
+A++ Y +CG ++DA ++F P +++V N+MI G G+ Q A +VFD M R +
Sbjct: 360 SALVDMYGKCGCVEDAEQIFYETPQRNLVTWNAMIGGYAHIGDAQNALLVFDDMIRSGET 419
Query: 193 A----TWSGMIKVYERKGYELEVIDLFTLMQK 220
A T +I R G + +LF M++
Sbjct: 420 APNYITLVNVITSCSRGGLTKDGYELFETMRE 451
>gi|218195439|gb|EEC77866.1| hypothetical protein OsI_17132 [Oryza sativa Indica Group]
Length = 865
Score = 417 bits (1071), Expect = e-113, Method: Compositional matrix adjust.
Identities = 228/653 (34%), Positives = 355/653 (54%), Gaps = 70/653 (10%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
M ER+VVSW M+ + G + EA L +M K V L S + RLF
Sbjct: 230 MAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGV-----RLDSTTYTSSLTACARLF 284
Query: 61 DM-------------MPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWT---- 103
+ +P+ D + ++ Y + G E + +F+ + +N +SWT
Sbjct: 285 SLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIG 344
Query: 104 -------------------------------TMISGYVNNNRIDVARKLFEVMPEKNE-- 130
T+ISG N + + R+L + +
Sbjct: 345 GSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNR 404
Query: 131 --VSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMR 188
V +++ Y +CG +Q+A +F +M + +V+ SMI Q G + KAR FD M
Sbjct: 405 AIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMD 464
Query: 189 EKDDATWSGMIKVYERKGYELEVIDLFTLM-QKEGVRVNFPSLISVLSVCASLASLDHGR 247
++ TW+ M+ Y + G E + + +++ M ++ V ++ + +++ CA + + G
Sbjct: 465 TRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGD 524
Query: 248 QVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYG 307
Q+ V+ ++V VA+ ITMY KCG + + + +FD KD+V WN++I+GY+Q+G
Sbjct: 525 QIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHG 584
Query: 308 LGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHY 367
+G+++ K F +M S G PD ++ V VLS CS++G V+EG+ F+ M + + P EH+
Sbjct: 585 MGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHF 644
Query: 368 ACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEP 427
+CMVDLLGRAG + +A LI+ MP +P A +WG+LL AC+ H +LAE+AAK + +L+
Sbjct: 645 SCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSACKIHGNDELAELAAKHVFELDS 704
Query: 428 KNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSH 487
++G Y+LL+ IY+ G+ D A++RK MR + + K PG SW+EVE KVH+F D VSH
Sbjct: 705 PDSGSYMLLAKIYSDAGKSDDSAQVRKLMRDKGIKKNPGYSWMEVENKVHVFKADD-VSH 763
Query: 488 PEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPE 547
P+ I L+++ + GY E S +HSEKLAVA+G++ LP
Sbjct: 764 PQVIAIRNKLDELMEKIAHLGYV-----------RTESPRSEIHHSEKLAVAFGIMSLPA 812
Query: 548 GVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
+PI +MKNLR+CGDCH+ IKLIS V RE ++RD RFHHFK G CSC DYW
Sbjct: 813 WMPIHIMKNLRICGDCHTVIKLISSVTDREFVIRDGVRFHHFKSGSCSCGDYW 865
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 115/478 (24%), Positives = 217/478 (45%), Gaps = 56/478 (11%)
Query: 41 TVMLGGFIRDSRIDDARRLFDM-MPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNV 99
+L + + DARRL + E +V+ M+ GY + G + + E+FD MP+++V
Sbjct: 43 NTLLHAYFSCGALSDARRLLRADIKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDV 102
Query: 100 ISWTTMISGYVNNNRIDVARKLF-----------------------------EVMPEKNE 130
SW T++SGY R + F E+ P+
Sbjct: 103 ASWNTLMSGYFQARRFLDGLETFVSMHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLG 162
Query: 131 VSW-----------TAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQK 179
+ W TA++ + +CG + A LF + ++ NSM+ G + +
Sbjct: 163 LFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDH 222
Query: 180 ARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCAS 239
A F+ M E+D +W+ MI + G E + L M ++GVR++ + S L+ CA
Sbjct: 223 AIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACAR 282
Query: 240 LASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSI 299
L SL G+Q+HA+++R +D YVAS LI +Y KCG + K +F++ ++ V W +
Sbjct: 283 LFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVL 342
Query: 300 ISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREI----FESMK 355
I G QY KS+++F++M + + D L ++S C + GR++ +S
Sbjct: 343 IGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGH 402
Query: 356 SKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLA 415
++ +V + ++ L + G +++A + +M E D + W S++ A +
Sbjct: 403 NRAIVVSNS-----LISLYAKCGDLQNAEFVFSSMS-ERDIVSWTSMITAYSQIGNI--- 453
Query: 416 EVAAKKLLQ-LEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEV 472
+ A++ ++ +NA + + Y G D ++ M + + P +++ +
Sbjct: 454 -IKAREFFDGMDTRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTL 510
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 120/544 (22%), Positives = 235/544 (43%), Gaps = 118/544 (21%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
+ E NV++ M+ GY ++G +++A LF +MP ++V SW ++ G+ + R D F
Sbjct: 66 IKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETF 125
Query: 61 -------DMMPEK---------------------------------DVVAQTNMVLGYCQ 80
D +P D +T +V + +
Sbjct: 126 VSMHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVR 185
Query: 81 DGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGY 140
G VD +F ++ + + +M++GY ID A + FE M E++ VSW M+
Sbjct: 186 CGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAAL 245
Query: 141 TQCGRIQDAWELF-----KAMPMKSVVASNSMI-------LGLGQN-------------- 174
+Q GR+++A L K + + S ++S+ LG G+
Sbjct: 246 SQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDP 305
Query: 175 -------------GEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKE 221
G ++A+ VF+ +++++ +W+ +I + + ++LF M+ E
Sbjct: 306 YVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAE 365
Query: 222 GVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKG 281
+ ++ +L +++S C + L GRQ+H+ ++ + + V++ LI++Y KCG+L
Sbjct: 366 LMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNA 425
Query: 282 KLIFDNFASKDIVMWNSIISGYA-------------------------------QYGLGE 310
+ +F + + +DIV W S+I+ Y+ Q+G E
Sbjct: 426 EFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMDTRNAITWNAMLGAYIQHGAEE 485
Query: 311 KSLKVFHEMFSS-GVMPDDVTLVGVLSACSYTGKVKEGREIF-ESMKSKYLVEPKTEHYA 368
LK++ M S V PD VT V + C+ G K G +I ++K+ ++ + A
Sbjct: 486 DGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAA 545
Query: 369 CMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPK 428
+ + + G++ +A KL + + + D + W +++ H + + AAK + K
Sbjct: 546 --ITMYSKCGRISEAQKLFDLLNGK-DVVSWNAMITGYSQH---GMGKQAAKTFDDMLSK 599
Query: 429 NAGP 432
A P
Sbjct: 600 GAKP 603
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 75/194 (38%), Gaps = 36/194 (18%)
Query: 229 SLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELV--------- 279
+L L C S +L R +H +LV V++ + L+ Y CG L
Sbjct: 6 ALADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYFSCGALSDARRLLRAD 65
Query: 280 ------------------KGKL-----IFDNFASKDIVMWNSIISGYAQYGLGEKSLKVF 316
+G L +FD +D+ WN+++SGY Q L+ F
Sbjct: 66 IKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETF 125
Query: 317 HEMFSSG-VMPDDVTLVGVLSACSYTGKVKEGREIFESM-KSKYLVEPKTEHYACMVDLL 374
M SG +P+ T V+ +C G + ++ K + +P E +VD+
Sbjct: 126 VSMHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVE--TALVDMF 183
Query: 375 GRAGQVEDAMKLIE 388
R G V+ A +L
Sbjct: 184 VRCGYVDFASRLFS 197
>gi|15231970|ref|NP_187494.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207322|sp|Q9SR82.1|PP219_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g08820
gi|6403507|gb|AAF07847.1|AC010871_23 unknown protein [Arabidopsis thaliana]
gi|12322725|gb|AAG51349.1|AC012562_10 unknown protein; 90102-88045 [Arabidopsis thaliana]
gi|332641162|gb|AEE74683.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 685
Score = 417 bits (1071), Expect = e-113, Method: Compositional matrix adjust.
Identities = 235/620 (37%), Positives = 339/620 (54%), Gaps = 48/620 (7%)
Query: 28 LFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQT---NMVLGYCQDGR- 83
LF N+ + ++ GF+ + + LF + + + +VL C
Sbjct: 67 LFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASS 126
Query: 84 ----VDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMG 139
+D + +V + T+++S Y + R++ A KLF+ +P+++ V+WTA+ G
Sbjct: 127 RKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSG 186
Query: 140 YTQCGRIQDAWELFKAMP---------------------------------------MKS 160
YT GR ++A +LFK M K+
Sbjct: 187 YTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKN 246
Query: 161 VVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQK 220
+++ + G+++KAR VFD M EKD TWS MI+ Y + E I+LF M +
Sbjct: 247 SFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQ 306
Query: 221 EGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVK 280
E ++ + S++ LS CASL +LD G + + R +F ++++A+ LI MY KCG + +
Sbjct: 307 ENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMAR 366
Query: 281 GKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSY 340
G +F KDIV+ N+ ISG A+ G + S VF + G+ PD T +G+L C +
Sbjct: 367 GFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVH 426
Query: 341 TGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWG 400
G +++G F ++ Y ++ EHY CMVDL GRAG ++DA +LI MP P+AI+WG
Sbjct: 427 AGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWG 486
Query: 401 SLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRN 460
+LL CR LAE K+L+ LEP NAG Y+ LSNIY+ GR+ + AE+R M K+
Sbjct: 487 ALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKG 546
Query: 461 VIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDV 520
+ K PG SWIE+E KVH F D SHP I LE +G +R G+ P + FV DV
Sbjct: 547 MKKIPGYSWIELEGKVHEFLADD-KSHPLSDKIYAKLEDLGNEMRLMGFVPTTEFVFFDV 605
Query: 521 DEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIIL 580
+EEEK L YHSEKLAVA GL+ G IRV+KNLRVCGDCH +KLISK+ REI++
Sbjct: 606 EEEEKERVLGYHSEKLAVALGLISTDHGQVIRVVKNLRVCGDCHEVMKLISKITRREIVV 665
Query: 581 RDANRFHHFKDGLCSCRDYW 600
RD NRFH F +G CSC DYW
Sbjct: 666 RDNNRFHCFTNGSCSCNDYW 685
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 116/250 (46%), Gaps = 51/250 (20%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVV--SWTV--MLGGFIRDSRIDDA 56
+P+R+VV+WTA+ GY G EA LF +M E V S+ + +L + +D
Sbjct: 172 IPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSG 231
Query: 57 RRLFDMMPE----KDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+ M E K+ +T +V Y + G++++ R +FD M +K++++W+TMI GY +N
Sbjct: 232 EWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASN 291
Query: 113 NRIDVARKLFEVMPEKNE--------------VSWTAMLMG------------------- 139
+ +LF M ++N S A+ +G
Sbjct: 292 SFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMA 351
Query: 140 ------YTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMRE---- 189
Y +CG + +E+FK M K +V N+ I GL +NG V+ + VF Q +
Sbjct: 352 NALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGIS 411
Query: 190 KDDATWSGMI 199
D +T+ G++
Sbjct: 412 PDGSTFLGLL 421
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/277 (20%), Positives = 111/277 (40%), Gaps = 40/277 (14%)
Query: 225 VNFPSLISVLSVCASLASL----DHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVK 280
V PS S + +L S+ +H +Q+H L+ D ++ ++L+ + +
Sbjct: 4 VTVPSATSKVQQIKTLISVACTVNHLKQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKY 63
Query: 281 GKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSY 340
L+F + +I ++NS+I+G+ L ++L +F + G+ T VL AC+
Sbjct: 64 SYLLFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTR 123
Query: 341 TGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMP--------- 391
K G ++ S+ K ++ + +G++ DA KL + +P
Sbjct: 124 ASSRKLGIDL-HSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTA 182
Query: 392 -------------------------FEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLE 426
+PD+ +L AC LD E K + ++E
Sbjct: 183 LFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEME 242
Query: 427 -PKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVI 462
KN+ L N+YA G+ + +M +++++
Sbjct: 243 MQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIV 279
>gi|225466163|ref|XP_002263755.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 624
Score = 417 bits (1071), Expect = e-113, Method: Compositional matrix adjust.
Identities = 231/589 (39%), Positives = 333/589 (56%), Gaps = 36/589 (6%)
Query: 18 EEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDV----VAQTN 73
+ G + A +F ++P + + + G++R + ++ M K V
Sbjct: 66 KSGDLNYALEVFDKIPHPDAYIYNTIFRGYLRWQLARNCIFMYSRMLHKSVSPNKFTYPP 125
Query: 74 MVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSW 133
++ C D ++EG++I +V+ + G+ NN I +
Sbjct: 126 LIRACCIDYAIEEGKQI-----HAHVLKFGFGADGFSLNNLIHM---------------- 164
Query: 134 TAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDA 193
Y ++ A +F MP + VV+ S+I G Q G V KAR VF+ M E++
Sbjct: 165 ------YVNFQSLEQARRVFDNMPQRDVVSWTSLITGYSQWGFVDKAREVFELMPERNSV 218
Query: 194 TWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQL 253
+W+ MI Y + E LF M+ E V ++ S+LS C L +L+ G+ +H +
Sbjct: 219 SWNAMIAAYVQSNRLHEAFALFDRMRLENVVLDKFVAASMLSACTGLGALEQGKWIHGYI 278
Query: 254 VRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSL 313
+ ++D +A+ +I MY KCG L K +F+ K I WN +I G A +G GE ++
Sbjct: 279 EKSGIELDSKLATTVIDMYCKCGCLEKASEVFNELPQKGISSWNCMIGGLAMHGKGEAAI 338
Query: 314 KVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDL 373
++F EM V PD +T V VLSAC+++G V+EG+ F+ M ++P EH+ CMVDL
Sbjct: 339 ELFKEMEREMVAPDGITFVNVLSACAHSGLVEEGKHYFQYMTEVLGLKPGMEHFGCMVDL 398
Query: 374 LGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPY 433
LGRAG +E+A KLI MP PDA + G+L+GACR H +L E KK+++LEP N+G Y
Sbjct: 399 LGRAGLLEEARKLINEMPVNPDAGVLGALVGACRIHGNTELGEQIGKKVIELEPHNSGRY 458
Query: 434 ILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFT--GRDCVSHPEHP 491
+LL+N+YAS GR+ DVA++RK M R V K PG S IE E V F GR +HP+
Sbjct: 459 VLLANLYASAGRWEDVAKVRKLMNDRGVKKAPGFSMIESESGVDEFIAGGR---AHPQAK 515
Query: 492 MIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPI 551
I L++I +R GY PD+ VLHD+DEEEK + L YHSEKLA+A+GL+K G +
Sbjct: 516 EIYAKLDEILETIRSIGYVPDTDGVLHDIDEEEKENPLYYHSEKLAIAFGLLKTKPGETL 575
Query: 552 RVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
R+ KNLR+C DCH A KLISKV REII+RD NRFHHF+ G CSC+DYW
Sbjct: 576 RISKNLRICRDCHQASKLISKVYDREIIIRDRNRFHHFRMGGCSCKDYW 624
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 94/403 (23%), Positives = 171/403 (42%), Gaps = 98/403 (24%)
Query: 8 SWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKD 67
S ++ YV + +A +F MP+++VVSWT ++ G+ + +D AR +F++MPE++
Sbjct: 157 SLNNLIHMYVNFQSLEQARRVFDNMPQRDVVSWTSLITGYSQWGFVDKAREVFELMPERN 216
Query: 68 VVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVI-----------SWTTM--------ISG 108
V+ M+ Y Q R+ E +FD M +NV+ + T + I G
Sbjct: 217 SVSWNAMIAAYVQSNRLHEAFALFDRMRLENVVLDKFVAASMLSACTGLGALEQGKWIHG 276
Query: 109 YVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMI 168
Y+ + I++ KL T ++ Y +CG ++ A E+F +P K + + N MI
Sbjct: 277 YIEKSGIELDSKLA-----------TTVIDMYCKCGCLEKASEVFNELPQKGISSWNCMI 325
Query: 169 LGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFP 228
GL +G+ + A I+LF M++E V +
Sbjct: 326 GGLAMHGKGEAA-------------------------------IELFKEMEREMVAPDGI 354
Query: 229 SLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNF 288
+ ++VLS CA ++ G+ Y + + +K G
Sbjct: 355 TFVNVLSACAHSGLVEEGKH--------------YFQYMTEVLGLKPG------------ 388
Query: 289 ASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGR 348
+ + ++ + GL E++ K+ +EM V PD L ++ AC G + G
Sbjct: 389 ----MEHFGCMVDLLGRAGLLEEARKLINEM---PVNPDAGVLGALVGACRIHGNTELGE 441
Query: 349 EIFESMKSKYLVEP-KTEHYACMVDLLGRAGQVEDAMKLIEAM 390
+I + + +EP + Y + +L AG+ ED K+ + M
Sbjct: 442 QIGKKVIE---LEPHNSGRYVLLANLYASAGRWEDVAKVRKLM 481
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 104/201 (51%), Gaps = 12/201 (5%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MP+R+VVSWT+++ GY + G + +A +F MPE+N VSW M+ +++ +R+ +A LF
Sbjct: 181 MPQRDVVSWTSLITGYSQWGFVDKAREVFELMPERNSVSWNAMIAAYVQSNRLHEAFALF 240
Query: 61 DMMPEKDVV----AQTNMVLGYCQDGRVDEGREIFDEMPKKNV----ISWTTMISGYVNN 112
D M ++VV +M+ G +++G+ I + K + TT+I Y
Sbjct: 241 DRMRLENVVLDKFVAASMLSACTGLGALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKC 300
Query: 113 NRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASN----SMI 168
++ A ++F +P+K SW M+ G G+ + A ELFK M + V +++
Sbjct: 301 GCLEKASEVFNELPQKGISSWNCMIGGLAMHGKGEAAIELFKEMEREMVAPDGITFVNVL 360
Query: 169 LGLGQNGEVQKARVVFDQMRE 189
+G V++ + F M E
Sbjct: 361 SACAHSGLVEEGKHYFQYMTE 381
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 135/294 (45%), Gaps = 36/294 (12%)
Query: 170 GLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPS 229
+ ++G++ A VFD++ D ++ + + Y R I +++ M + V N +
Sbjct: 63 AISKSGDLNYALEVFDKIPHPDAYIYNTIFRGYLRWQLARNCIFMYSRMLHKSVSPNKFT 122
Query: 230 LISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFA 289
++ C +++ G+Q+HA +++ F D + + LI MY+ L + + +FDN
Sbjct: 123 YPPLIRACCIDYAIEEGKQIHAHVLKFGFGADGFSLNNLIHMYVNFQSLEQARRVFDNMP 182
Query: 290 SKDIVMWNSIISGYAQYGLGEKSLKVF------------------------HEMFS---- 321
+D+V W S+I+GY+Q+G +K+ +VF HE F+
Sbjct: 183 QRDVVSWTSLITGYSQWGFVDKAREVFELMPERNSVSWNAMIAAYVQSNRLHEAFALFDR 242
Query: 322 ---SGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAG 378
V+ D +LSAC+ G +++G+ I ++ K +E ++ ++D+ + G
Sbjct: 243 MRLENVVLDKFVAASMLSACTGLGALEQGKWIHGYIE-KSGIELDSKLATTVIDMYCKCG 301
Query: 379 QVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGP 432
+E A ++ +P + W ++G H K E A + ++E + P
Sbjct: 302 CLEKASEVFNELP-QKGISSWNCMIGGLAMHGK---GEAAIELFKEMEREMVAP 351
>gi|297804786|ref|XP_002870277.1| hypothetical protein ARALYDRAFT_493409 [Arabidopsis lyrata subsp.
lyrata]
gi|297316113|gb|EFH46536.1| hypothetical protein ARALYDRAFT_493409 [Arabidopsis lyrata subsp.
lyrata]
Length = 684
Score = 417 bits (1071), Expect = e-113, Method: Compositional matrix adjust.
Identities = 227/618 (36%), Positives = 348/618 (56%), Gaps = 21/618 (3%)
Query: 2 PERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIR---DSRIDDARR 58
P RNVVSWT++V G + G + A F++M + V + R+ +
Sbjct: 69 PARNVVSWTSLVSGLAQNGHFSTALFEFFEMRREGVAPNDFTFPCVFKAVASLRLPVTGK 128
Query: 59 LFDMMPEK-----DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNN 113
+ K DV + YC+ D+ R++FDE+P++N+ +W IS V +
Sbjct: 129 QIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAYISNSVTDG 188
Query: 114 RIDVARKLF----EVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKS-----VVAS 164
R A + F + + N +++ L + G + D + +S V
Sbjct: 189 RPKEAIEAFIEFRRIGGQPNSITFCGFLNACSD-GLLLDLGMQMHGLVFRSGFDTDVSVY 247
Query: 165 NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVR 224
N +I G+ +++ + ++F +M K+ +W ++ Y + + + L+ +KE V
Sbjct: 248 NGLIDFYGKCKQIRSSEIIFAEMGMKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKEIVE 307
Query: 225 VNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLI 284
+ + SVLS CA +A L+ GR +HA V+ + +++V S L+ MY KCG + +
Sbjct: 308 TSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERNIFVGSALVDMYGKCGCIEDSEQA 367
Query: 285 FDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGV--MPDDVTLVGVLSACSYTG 342
FD K++V NS+I GYA G + +L +F +M G P+ +T V +LSACS G
Sbjct: 368 FDEMPEKNLVTLNSLIGGYAHQGQVDMALALFEDMAPRGCGPAPNYMTFVSLLSACSRAG 427
Query: 343 KVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSL 402
V+ G +IF+SMKS Y +EP EHY+C+VD+LGRAG VE A + I+ MP +P +WG+L
Sbjct: 428 AVENGMKIFDSMKSTYGIEPGAEHYSCIVDMLGRAGMVEQAFEFIKKMPIKPTISVWGAL 487
Query: 403 LGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVI 462
ACR H K L +AA+ L +L+PK++G ++LLSN +A+ GR+ + +R+ M+ +
Sbjct: 488 QNACRMHGKPHLGILAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREEMKGVGIK 547
Query: 463 KPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDE 522
K G SWI V+ +VH F +D SH + I ML K+ + AGY PD L+D++E
Sbjct: 548 KGAGYSWITVKNQVHAFQAKD-RSHKMNKEIQTMLTKLRNKMEAAGYKPDLKLSLYDLEE 606
Query: 523 EEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRD 582
EEK + +HSEKLA+A+GLV LP VPIR+ KNLR+CGDCHS K +S + REII+RD
Sbjct: 607 EEKAAEVSHHSEKLALAFGLVALPLSVPIRITKNLRICGDCHSFFKFVSGSVKREIIVRD 666
Query: 583 ANRFHHFKDGLCSCRDYW 600
NRFH FKDG+CSC+DYW
Sbjct: 667 NNRFHRFKDGICSCKDYW 684
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 130/309 (42%), Gaps = 38/309 (12%)
Query: 97 KNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAM 156
KN IS ++M G V + RI K + P ++ ++ Y++ + A + +
Sbjct: 14 KNAISTSSMRLGRVVHARI---VKTLDSPPPPFLANY--LINMYSKLDHPESARLVLRLT 68
Query: 157 PMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFT 216
P ++VV+ S++ GL QNG A F +MR
Sbjct: 69 PARNVVSWTSLVSGLAQNGHFSTALFEFFEMR---------------------------- 100
Query: 217 LMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCG 276
+EGV N + V ASL G+Q+HA V+C +DV+V MY K
Sbjct: 101 ---REGVAPNDFTFPCVFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTR 157
Query: 277 ELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLS 336
+ +FD +++ WN+ IS G +++++ F E G P+ +T G L+
Sbjct: 158 LRDDARKLFDEIPERNLETWNAYISNSVTDGRPKEAIEAFIEFRRIGGQPNSITFCGFLN 217
Query: 337 ACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDA 396
ACS + G ++ + + + Y ++D G+ Q+ + + M + +A
Sbjct: 218 ACSDGLLLDLGMQM-HGLVFRSGFDTDVSVYNGLIDFYGKCKQIRSSEIIFAEMGMK-NA 275
Query: 397 IIWGSLLGA 405
+ W SL+ A
Sbjct: 276 VSWCSLVAA 284
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 125/268 (46%), Gaps = 20/268 (7%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM----PEKNVVSWTVMLG----GFIRDSR 52
+PERN+ +W A + V +G EA F + + N +++ L G + D
Sbjct: 169 IPERNLETWNAYISNSVTDGRPKEAIEAFIEFRRIGGQPNSITFCGFLNACSDGLLLDLG 228
Query: 53 IDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+ +F + DV ++ Y + ++ IF EM KN +SW ++++ YV N
Sbjct: 229 MQMHGLVFRSGFDTDVSVYNGLIDFYGKCKQIRSSEIIFAEMGMKNAVSWCSLVAAYVQN 288
Query: 113 NRIDVARKLF----EVMPEKNEVSWTAML-----MGYTQCGRIQDAWELFKAMPMKSVVA 163
+ + A L+ + + E ++ +++L M + GR A + KA +++
Sbjct: 289 HEDEKASVLYLRSRKEIVETSDFMISSVLSACAGMAGLELGRSIHAHAV-KACVERNIFV 347
Query: 164 SNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGV 223
++++ G+ G ++ + FD+M EK+ T + +I Y +G + LF M G
Sbjct: 348 GSALVDMYGKCGCIEDSEQAFDEMPEKNLVTLNSLIGGYAHQGQVDMALALFEDMAPRGC 407
Query: 224 --RVNFPSLISVLSVCASLASLDHGRQV 249
N+ + +S+LS C+ ++++G ++
Sbjct: 408 GPAPNYMTFVSLLSACSRAGAVENGMKI 435
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 88/170 (51%), Gaps = 14/170 (8%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRD----SRIDDA 56
M +N VSW ++V YV+ +A L+ + ++ V + M+ + + ++
Sbjct: 270 MGMKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKEIVETSDFMISSVLSACAGMAGLELG 329
Query: 57 RRL----FDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
R + E+++ + +V Y + G +++ + FDEMP+KN+++ ++I GY +
Sbjct: 330 RSIHAHAVKACVERNIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTLNSLIGGYAHQ 389
Query: 113 NRIDVARKLFEVM------PEKNEVSWTAMLMGYTQCGRIQDAWELFKAM 156
++D+A LFE M P N +++ ++L ++ G +++ ++F +M
Sbjct: 390 GQVDMALALFEDMAPRGCGPAPNYMTFVSLLSACSRAGAVENGMKIFDSM 439
>gi|296089800|emb|CBI39619.3| unnamed protein product [Vitis vinifera]
Length = 640
Score = 417 bits (1071), Expect = e-113, Method: Compositional matrix adjust.
Identities = 231/616 (37%), Positives = 347/616 (56%), Gaps = 62/616 (10%)
Query: 31 QMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREI 90
+ + N + ++L GFI D+ A RL + + +D +I
Sbjct: 41 NLKQFNRILSQMILTGFISDTFA--ASRLLKFSTDSPFIG-------------LDYSLQI 85
Query: 91 FDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKN--------------------- 129
FD + N W TM+ Y+ +N + A L+++M + N
Sbjct: 86 FDRIENSNGFMWNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQACAVRLLE 145
Query: 130 ----EVSWTAMLMG--------------YTQCGRIQDAWELFKAMPMKSVVASNSMILGL 171
E+ + +G Y CG ++DA +LF P+ V+ NS++ G
Sbjct: 146 FGGKEIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSWNSILAGY 205
Query: 172 ---GQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFP 228
G G+V +A +F++M EKD +WS +I YE+ G E + +F M G+R++
Sbjct: 206 VKKGDMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNANGMRLDEV 265
Query: 229 SLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLI----TMYIKCGELVKGKLI 284
++SVLS CA L+ + G+ +H ++R + V + + LI MY+KCG + +
Sbjct: 266 VVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYSDMYMKCGCVENALEV 325
Query: 285 FDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKV 344
F+ K + WN++I G A GL E+SL +F EM ++GV+P+++T +GVL AC + G V
Sbjct: 326 FNGMEEKGVSSWNALIIGLAVNGLVERSLDMFSEMKNNGVIPNEITFMGVLGACRHMGLV 385
Query: 345 KEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLG 404
EGR F SM K+ +EP +HY CMVDLLGRAG + +A KLIE+MP PD WG+LLG
Sbjct: 386 DEGRCHFASMIEKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIESMPMAPDVATWGALLG 445
Query: 405 ACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKP 464
AC+ H ++ E +KL++L+P + G ++LLSNI+AS+G + DV E+R M+++ V+K
Sbjct: 446 ACKKHGDTEMGERVGRKLIELQPDHDGFHVLLSNIFASKGDWEDVLEVRGMMKQQGVVKT 505
Query: 465 PGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEE 524
PGCS IE VH F D +HP + ML ++ L+ GY PD++ V D+DEEE
Sbjct: 506 PGCSLIEANGVVHEFLAGD-KTHPWINKVEGMLNEMAKRLKMEGYAPDTNEVSLDIDEEE 564
Query: 525 KVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDAN 584
K +L HSEKLA+A+GL+ + PIR+MKNLR+C DCH+A KLISK REI++RD +
Sbjct: 565 KETTLFRHSEKLAIAFGLLTISPPTPIRIMKNLRICNDCHTAAKLISKAYAREIVVRDRH 624
Query: 585 RFHHFKDGLCSCRDYW 600
RFH+FK+G CSC DYW
Sbjct: 625 RFHYFKEGACSCMDYW 640
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 70/329 (21%), Positives = 148/329 (44%), Gaps = 51/329 (15%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRD---SRIDDARRL 59
+ +V ++ Y G + +A LF + P + VSW +L G+++ ++ +A +L
Sbjct: 161 DSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSWNSILAGYVKKGDMGQVMEAWKL 220
Query: 60 FDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNV----ISWTTMISGYVNNNRI 115
F+ M EKD+V+ + ++ GY Q+G +E +F EM + + +++S + + +
Sbjct: 221 FNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSACAHLSIV 280
Query: 116 DVARKLFEVMPEKNEVSWTAMLMG--------YTQCGRIQDAWELFKAMPMKSVVASNSM 167
+ + ++ S+ + Y +CG +++A E+F M K V + N++
Sbjct: 281 KTGKMIHGLVIRMGIESYVNLQNALIHMYSDMYMKCGCVENALEVFNGMEEKGVSSWNAL 340
Query: 168 ILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNF 227
I+GL NG V+++ +D+F+ M+ GV N
Sbjct: 341 IIGLAVNGLVERS-------------------------------LDMFSEMKNNGVIPNE 369
Query: 228 PSLISVLSVCASLASLDHGRQVHAQLV-RCQFDVDVYVASVLITMYIKCGELVKG-KLIF 285
+ + VL C + +D GR A ++ + + +V ++ + + G L + KLI
Sbjct: 370 ITFMGVLGACRHMGLVDEGRCHFASMIEKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIE 429
Query: 286 DNFASKDIVMWNSIISGYAQYG---LGEK 311
+ D+ W +++ ++G +GE+
Sbjct: 430 SMPMAPDVATWGALLGACKKHGDTEMGER 458
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 99/228 (43%), Gaps = 22/228 (9%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV----VSWTVMLGGFIRDSRIDDA 56
M E+++VSW+A++ GY + GM EA +F +M + V +L S +
Sbjct: 224 MDEKDMVSWSALISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSACAHLSIVKTG 283
Query: 57 RRLFDMMPEKDVVAQTNMVLG--------YCQDGRVDEGREIFDEMPKKNVISWTTMISG 108
+ + ++ + + N+ Y + G V+ E+F+ M +K V SW +I G
Sbjct: 284 KMIHGLVIRMGIESYVNLQNALIHMYSDMYMKCGCVENALEVFNGMEEKGVSSWNALIIG 343
Query: 109 YVNNNRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVAS 164
N ++ + +F M NE+++ +L G + + F +M K +
Sbjct: 344 LAVNGLVERSLDMFSEMKNNGVIPNEITFMGVLGACRHMGLVDEGRCHFASMIEKHGIEP 403
Query: 165 N-----SMILGLGQNGEVQKARVVFDQMREKDD-ATWSGMIKVYERKG 206
N M+ LG+ G + +A + + M D ATW ++ ++ G
Sbjct: 404 NVKHYGCMVDLLGRAGLLNEAEKLIESMPMAPDVATWGALLGACKKHG 451
>gi|449438512|ref|XP_004137032.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Cucumis sativus]
gi|449526872|ref|XP_004170437.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Cucumis sativus]
Length = 667
Score = 417 bits (1071), Expect = e-113, Method: Compositional matrix adjust.
Identities = 216/574 (37%), Positives = 350/574 (60%), Gaps = 40/574 (6%)
Query: 66 KDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVM 125
KD +++ Y + G+ +F MP++NV+S+ +I+GY+ ++ A+KLF+ M
Sbjct: 95 KDKFISNHLLNFYSKLGQFKSSLVLFSNMPRRNVMSFNILINGYLQLGDLESAQKLFDEM 154
Query: 126 PEKNEVSWTAMLMGYTQCGRIQDAWELFKAM--------------------PMKSVVAS- 164
E+N +W AM+ G TQ + A LFK M ++S++A
Sbjct: 155 SERNIATWNAMIAGLTQFEFNKQALSLFKEMYGLGFLPDEFTLGSVLRGCAGLRSLLAGQ 214
Query: 165 --NSMILGLG----------------QNGEVQKARVVFDQMREKDDATWSGMIKVYERKG 206
++ +L G ++G + + M + W+ +I + G
Sbjct: 215 EVHACLLKCGFELSSVVGSSLAHMYIKSGSLSDGEKLIKSMPIRTVVAWNTLIAGKAQNG 274
Query: 207 YELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVAS 266
EV++ + +M+ G R + + +SVLS C+ LA+L G+Q+HA++++ + V S
Sbjct: 275 CPEEVLNQYNMMKMAGFRPDKITFVSVLSACSELATLGQGQQIHAEVIKAGASSVLAVVS 334
Query: 267 VLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMP 326
LI+MY + G L F + + D+V+W+S+I+ Y +G GE++L++FH+M +
Sbjct: 335 SLISMYSRSGCLEDSIKAFVDRENFDVVLWSSMIAAYGFHGRGEEALELFHQMEDLKMEA 394
Query: 327 DDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKL 386
++VT + +L ACS++G ++G E F+ M KY ++P+ EHY C+VDLLGRAG++E+A +
Sbjct: 395 NEVTFLSLLYACSHSGLKEKGTEYFDLMVKKYKLKPRIEHYTCVVDLLGRAGRLEEAEGM 454
Query: 387 IEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRF 446
I +MP +PD IIW +LL AC+ H + ++AE ++++++L+P +A Y+LLSNI+AS +
Sbjct: 455 IRSMPVQPDGIIWKTLLAACKLHKEAEMAERISEEIIKLDPLDAASYVLLSNIHASARNW 514
Query: 447 HDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLRE 506
+V+++RK MR R+V K PG SW+E++ VH F+ D SHP++ I L+++ L++
Sbjct: 515 LNVSQIRKAMRDRSVRKEPGISWLELKNLVHQFSMGD-KSHPQYFEIDLYLKELMSELKQ 573
Query: 507 AGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSA 566
GY P+ VLHD+D EEK ++L +HSEK A+A+ L+ E VPIRVMKNLRVC DCH+A
Sbjct: 574 HGYVPELGSVLHDMDNEEKEYNLAHHSEKFAIAFALMNTSENVPIRVMKNLRVCDDCHNA 633
Query: 567 IKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
IK IS++ REII+RDA+RFHHFKDG CSC +YW
Sbjct: 634 IKCISRIRNREIIVRDASRFHHFKDGECSCGNYW 667
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 104/370 (28%), Positives = 189/370 (51%), Gaps = 13/370 (3%)
Query: 79 CQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVM----PEKNEVSWT 134
C DGR+ + + F + ++ ++ + + +++ ++ K++
Sbjct: 42 CNDGRIKQAYDTFTSEIWSDPSLFSHLLQSCIKLGSLFGGKQVHSLIITSGGSKDKFISN 101
Query: 135 AMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDAT 194
+L Y++ G+ + + LF MP ++V++ N +I G Q G+++ A+ +FD+M E++ AT
Sbjct: 102 HLLNFYSKLGQFKSSLVLFSNMPRRNVMSFNILINGYLQLGDLESAQKLFDEMSERNIAT 161
Query: 195 WSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLV 254
W+ MI + + + + LF M G + +L SVL CA L SL G++VHA L+
Sbjct: 162 WNAMIAGLTQFEFNKQALSLFKEMYGLGFLPDEFTLGSVLRGCAGLRSLLAGQEVHACLL 221
Query: 255 RCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLK 314
+C F++ V S L MYIK G L G+ + + + +V WN++I+G AQ G E+ L
Sbjct: 222 KCGFELSSVVGSSLAHMYIKSGSLSDGEKLIKSMPIRTVVAWNTLIAGKAQNGCPEEVLN 281
Query: 315 VFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLL 374
++ M +G PD +T V VLSACS + +G++I + K + ++ +
Sbjct: 282 QYNMMKMAGFRPDKITFVSVLSACSELATLGQGQQIHAEV-IKAGASSVLAVVSSLISMY 340
Query: 375 GRAGQVEDAMK-LIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLE--PKNAG 431
R+G +ED++K ++ F D ++W S++ A H + E A + Q+E A
Sbjct: 341 SRSGCLEDSIKAFVDRENF--DVVLWSSMIAAYGFHGR---GEEALELFHQMEDLKMEAN 395
Query: 432 PYILLSNIYA 441
LS +YA
Sbjct: 396 EVTFLSLLYA 405
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/285 (21%), Positives = 116/285 (40%), Gaps = 47/285 (16%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MP RNV+S+ ++ GY++ G + A LF +M E+N+ +W M+ G + A LF
Sbjct: 123 MPRRNVMSFNILINGYLQLGDLESAQKLFDEMSERNIATWNAMIAGLTQFEFNKQALSLF 182
Query: 61 DMMP---------------------------------------EKDVVAQTNMVLGYCQD 81
M E V +++ Y +
Sbjct: 183 KEMYGLGFLPDEFTLGSVLRGCAGLRSLLAGQEVHACLLKCGFELSSVVGSSLAHMYIKS 242
Query: 82 GRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMP----EKNEVSWTAML 137
G + +G ++ MP + V++W T+I+G N + + +M +++++ ++L
Sbjct: 243 GSLSDGEKLIKSMPIRTVVAWNTLIAGKAQNGCPEEVLNQYNMMKMAGFRPDKITFVSVL 302
Query: 138 MGYTQCGRI----QDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDA 193
++ + Q E+ KA + +S+I ++G ++ + F D
Sbjct: 303 SACSELATLGQGQQIHAEVIKAGASSVLAVVSSLISMYSRSGCLEDSIKAFVDRENFDVV 362
Query: 194 TWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCA 238
WS MI Y G E ++LF M+ + N + +S+L C+
Sbjct: 363 LWSSMIAAYGFHGRGEEALELFHQMEDLKMEANEVTFLSLLYACS 407
>gi|413952892|gb|AFW85541.1| hypothetical protein ZEAMMB73_780855 [Zea mays]
Length = 787
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 223/639 (34%), Positives = 364/639 (56%), Gaps = 52/639 (8%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFD---MMPEK 66
+A+ + Y + +A +F +P + + W +L G ++ R+ D + P+
Sbjct: 153 SALAKLYFKLSRGDDARKVFDTVPSPDTILWNTLLAGLPGSEALEAFVRMVDAGRVRPDS 212
Query: 67 DVVAQT--------NMVLGYC-------------------------QDGRVDEGREIFDE 93
+A + +M +G C + G +D + +FD
Sbjct: 213 TTLASSLRAAAEASHMAMGRCVHGYGVKCGLAEHEHVVTGLMSLYSKCGDMDSAQFLFDR 272
Query: 94 MPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCG----- 144
M +++++ +ISGY N ++ + +LF+ + N + A++ Y+ G
Sbjct: 273 MDNPDLVAYNALISGYSVNGMVESSVELFKELTASGWRPNSSTLVAVIPVYSPFGHELLA 332
Query: 145 RIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYER 204
R A+ + KA + S ++ + +++ AR +FD M EK +W+ MI Y +
Sbjct: 333 RCLHAF-VVKARLDADALVSTALTTLYCRLNDMESARSIFDAMLEKTMESWNAMISGYAQ 391
Query: 205 KGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYV 264
G + LF LMQ+ V+ N ++ S LS CA L +L G+ VH + + + +++VYV
Sbjct: 392 NGLTEMAVALFQLMQELNVQPNPITISSTLSACAHLGALSLGKWVHRIISKEKLELNVYV 451
Query: 265 ASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGV 324
+ LI MY KCG + + + IFD +K++V WN++ISGY +G G ++LK++ +M + +
Sbjct: 452 MTALIDMYAKCGSIAEARSIFDRMDNKNVVSWNAMISGYGLHGQGAEALKLYKDMLDARI 511
Query: 325 MPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAM 384
+P T + V+ ACS+ G V EG+++F M ++Y + P EH CMVDLLGRAG++ +A+
Sbjct: 512 LPTSSTFLSVIYACSHGGLVDEGQKVFRVMTNEYRITPGIEHCTCMVDLLGRAGKLNEAL 571
Query: 385 KLIEAMPFEPDAI---IWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYA 441
+LI P AI +WG+LLGAC H DLA++A++KL +L+ +NAG Y+LLSN+Y
Sbjct: 572 ELISEFP--QSAIGPGVWGALLGACMVHKNSDLAKLASQKLFELDSENAGYYVLLSNLYT 629
Query: 442 SQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIG 501
S+ + + A +R+ + R ++K PGC+ IE+ + H+F D + HP+ I LE++
Sbjct: 630 SKKHYSEAAVVRQEAKTRKLVKTPGCTLIEIGDRPHVFMAGDHL-HPQSEAIYSYLERLT 688
Query: 502 GLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCG 561
+ EAGY P + L+DV+EEEK H ++ HSEKLA+A+GL+ G IR++KNLRVC
Sbjct: 689 AKMIEAGYQPVTEAALYDVEEEEKEHMVKVHSEKLAIAFGLLSTEPGTEIRIIKNLRVCL 748
Query: 562 DCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
DCH+A K ISKV R I++RDA+RFHHF+DG+CSC DYW
Sbjct: 749 DCHNATKFISKVTQRLIVVRDASRFHHFRDGVCSCGDYW 787
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 120/276 (43%), Gaps = 38/276 (13%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLF-------WQMPEKNVVSWTVM---------- 43
M ++V++ A++ GY GM+ + LF W+ +V+ +
Sbjct: 273 MDNPDLVAYNALISGYSVNGMVESSVELFKELTASGWRPNSSTLVAVIPVYSPFGHELLA 332
Query: 44 --LGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVIS 101
L F+ +R+D D + T + YC+ ++ R IFD M +K + S
Sbjct: 333 RCLHAFVVKARLD-----------ADALVSTALTTLYCRLNDMESARSIFDAMLEKTMES 381
Query: 102 WTTMISGYVNNNRIDVARKLFEVMPE----KNEVSWTAMLMGYTQCGRIQDAWELFKAMP 157
W MISGY N ++A LF++M E N ++ ++ L G + + + +
Sbjct: 382 WNAMISGYAQNGLTEMAVALFQLMQELNVQPNPITISSTLSACAHLGALSLGKWVHRIIS 441
Query: 158 MK----SVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVID 213
+ +V ++I + G + +AR +FD+M K+ +W+ MI Y G E +
Sbjct: 442 KEKLELNVYVMTALIDMYAKCGSIAEARSIFDRMDNKNVVSWNAMISGYGLHGQGAEALK 501
Query: 214 LFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQV 249
L+ M + + +SV+ C+ +D G++V
Sbjct: 502 LYKDMLDARILPTSSTFLSVIYACSHGGLVDEGQKV 537
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 72/160 (45%), Gaps = 9/160 (5%)
Query: 246 GRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQ 305
R +H V + D +VAS L +Y K + +FD S D ++WN++++G
Sbjct: 133 ARTLHGLSVAAGYAADTFVASALAKLYFKLSRGDDARKVFDTVPSPDTILWNTLLAGLP- 191
Query: 306 YGLGEKSLKVFHEMFSSG-VMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKT 364
G ++L+ F M +G V PD TL L A + + GR + L E
Sbjct: 192 ---GSEALEAFVRMVDAGRVRPDSTTLASSLRAAAEASHMAMGRCVHGYGVKCGLAE--H 246
Query: 365 EHYAC-MVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
EH ++ L + G ++ A L + M PD + + +L+
Sbjct: 247 EHVVTGLMSLYSKCGDMDSAQFLFDRMD-NPDLVAYNALI 285
>gi|356536005|ref|XP_003536531.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14850-like [Glycine max]
Length = 686
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 230/617 (37%), Positives = 351/617 (56%), Gaps = 22/617 (3%)
Query: 4 RNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDS---RIDDARRLF 60
R VV+WT+++ G V T A F M + V+ + S + +
Sbjct: 72 RTVVTWTSLISGCVHNRRFTSALLHFSNMRRECVLPNDFTFPCVFKASASLHMPVTGKQL 131
Query: 61 DMMPEK-----DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNR- 114
+ K DV + Y + G E R +FDEMP +N+ +W +S V + R
Sbjct: 132 HALALKGGNILDVFVGCSAFDMYSKTGLRPEARNMFDEMPHRNLATWNAYMSNAVQDGRC 191
Query: 115 ---IDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWEL----FKAMPMKSVVASNSM 167
I +K V E N +++ A L ++ +L ++ + V N +
Sbjct: 192 LDAIAAFKKFLCVDGEPNAITFCAFLNACADIVSLELGRQLHGFIVRSRYREDVSVFNGL 251
Query: 168 ILGLGQNGEVQKARVVFDQMRE--KDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRV 225
I G+ G++ + +VF ++ ++ +W ++ + E +F +KE
Sbjct: 252 IDFYGKCGDIVSSELVFSRIGSGRRNVVSWCSLLAALVQNHEEERACMVFLQARKEVEPT 311
Query: 226 NFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIF 285
+F + SVLS CA L L+ GR VHA ++ + +++V S L+ +Y KCG + + +F
Sbjct: 312 DF-MISSVLSACAELGGLELGRSVHALALKACVEENIFVGSALVDLYGKCGSIEYAEQVF 370
Query: 286 DNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSS--GVMPDDVTLVGVLSACSYTGK 343
+++V WN++I GYA G + +L +F EM S G+ VTLV VLSACS G
Sbjct: 371 REMPERNLVTWNAMIGGYAHLGDVDMALSLFQEMTSGSCGIALSYVTLVSVLSACSRAGA 430
Query: 344 VKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
V+ G +IFESM+ +Y +EP EHYAC+VDLLGR+G V+ A + I+ MP P +WG+LL
Sbjct: 431 VERGLQIFESMRGRYGIEPGAEHYACVVDLLGRSGLVDRAYEFIKRMPILPTISVWGALL 490
Query: 404 GACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIK 463
GAC+ H K L ++AA+KL +L+P ++G +++ SN+ AS GR+ + +RK MR + K
Sbjct: 491 GACKMHGKTKLGKIAAEKLFELDPDDSGNHVVFSNMLASAGRWEEATIVRKEMRDIGIKK 550
Query: 464 PPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEE 523
G SW+ V+ +VH+F +D H ++ I ML K+ G +++AGY PD++ L D++EE
Sbjct: 551 NVGYSWVAVKNRVHVFQAKDSF-HEKNSEIQAMLAKLRGEMKKAGYVPDANLSLFDLEEE 609
Query: 524 EKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDA 583
EK + YHSEK+A+A+GL+ LP GVPIR+ KNLR+C DCHSAIK ISK++GREII+RD
Sbjct: 610 EKASEVWYHSEKIALAFGLITLPRGVPIRITKNLRICIDCHSAIKFISKIVGREIIVRDN 669
Query: 584 NRFHHFKDGLCSCRDYW 600
NRFH FKDG CSC+DYW
Sbjct: 670 NRFHRFKDGWCSCKDYW 686
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 85/404 (21%), Positives = 172/404 (42%), Gaps = 58/404 (14%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM----PEKNVVSWTVMLGGFIRDSRIDDA 56
MP RN+ +W A + V++G +A F + E N +++ L ++
Sbjct: 170 MPHRNLATWNAYMSNAVQDGRCLDAIAAFKKFLCVDGEPNAITFCAFLNACADIVSLELG 229
Query: 57 RRLFDMMP----EKDVVAQTNMVLGYCQDGRVDEGREIFDEM--PKKNVISWTTMISGYV 110
R+L + +DV ++ Y + G + +F + ++NV+SW ++++ V
Sbjct: 230 RQLHGFIVRSRYREDVSVFNGLIDFYGKCGDIVSSELVFSRIGSGRRNVVSWCSLLAALV 289
Query: 111 NNNRIDVARKLF-----EVMPEK---NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVV 162
N+ + A +F EV P + V +G + GR A L KA +++
Sbjct: 290 QNHEEERACMVFLQARKEVEPTDFMISSVLSACAELGGLELGRSVHALAL-KACVEENIF 348
Query: 163 ASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKE- 221
++++ G+ G ++ A VF +M E++ TW+ MI Y G + LF M
Sbjct: 349 VGSALVDLYGKCGSIEYAEQVFREMPERNLVTWNAMIGGYAHLGDVDMALSLFQEMTSGS 408
Query: 222 -GVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVK 280
G+ +++ +L+SVLS C+ +++ G Q+ E ++
Sbjct: 409 CGIALSYVTLVSVLSACSRAGAVERGLQIF--------------------------ESMR 442
Query: 281 GKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSY 340
G+ + A + ++ + GL +++ + M ++P +L AC
Sbjct: 443 GRYGIEPGAEH----YACVVDLLGRSGLVDRAYEFIKRM---PILPTISVWGALLGACKM 495
Query: 341 TGKVKEGREIFESMKSKYLVEP-KTEHYACMVDLLGRAGQVEDA 383
GK K G+ E + + ++P + ++ ++L AG+ E+A
Sbjct: 496 HGKTKLGKIAAEKL---FELDPDDSGNHVVFSNMLASAGRWEEA 536
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 98/230 (42%), Gaps = 4/230 (1%)
Query: 178 QKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVC 237
A++V + TW+ +I + F+ M++E V N + V
Sbjct: 60 NSAQLVLSLTNPRTVVTWTSLISGCVHNRRFTSALLHFSNMRRECVLPNDFTFPCVFKAS 119
Query: 238 ASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWN 297
ASL G+Q+HA ++ +DV+V MY K G + + +FD +++ WN
Sbjct: 120 ASLHMPVTGKQLHALALKGGNILDVFVGCSAFDMYSKTGLRPEARNMFDEMPHRNLATWN 179
Query: 298 SIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESM-KS 356
+ +S Q G ++ F + P+ +T L+AC+ ++ GR++ + +S
Sbjct: 180 AYMSNAVQDGRCLDAIAAFKKFLCVDGEPNAITFCAFLNACADIVSLELGRQLHGFIVRS 239
Query: 357 KYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAM-PFEPDAIIWGSLLGA 405
+Y + ++D G+ G + + + + + + W SLL A
Sbjct: 240 RY--REDVSVFNGLIDFYGKCGDIVSSELVFSRIGSGRRNVVSWCSLLAA 287
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 96/207 (46%), Gaps = 25/207 (12%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDM 62
E N+ +A+V Y + G I A +F +MPE+N+V+W M+GG+ +D A LF
Sbjct: 344 EENIFVGSALVDLYGKCGSIEYAEQVFREMPERNLVTWNAMIGGYAHLGDVDMALSLFQE 403
Query: 63 MPEKDV------VAQTNMVLGYCQDGRVDEGREIFDEMPKKNVIS-----WTTMISGYVN 111
M V +++ + G V+ G +IF+ M + I + ++
Sbjct: 404 MTSGSCGIALSYVTLVSVLSACSRAGAVERGLQIFESMRGRYGIEPGAEHYACVVDLLGR 463
Query: 112 NNRIDVARKLFEVMPEKNEVS-WTAML-----MGYTQCGRIQDAWELFKAMPMKS---VV 162
+ +D A + + MP +S W A+L G T+ G+I A +LF+ P S VV
Sbjct: 464 SGLVDRAYEFIKRMPILPTISVWGALLGACKMHGKTKLGKIA-AEKLFELDPDDSGNHVV 522
Query: 163 ASNSMILGLGQNGEVQKARVVFDQMRE 189
SN L G ++A +V +MR+
Sbjct: 523 FSNM----LASAGRWEEATIVRKEMRD 545
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 78/176 (44%), Gaps = 25/176 (14%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV------VSWTVMLGGFIRDSRID 54
MPERN+V+W AM+ GY G + A +LF +M + V+ +L R ++
Sbjct: 373 MPERNLVTWNAMIGGYAHLGDVDMALSLFQEMTSGSCGIALSYVTLVSVLSACSRAGAVE 432
Query: 55 DARRLFDMM-------PEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVIS-WTTMI 106
++F+ M P + A +LG + G VD E MP IS W ++
Sbjct: 433 RGLQIFESMRGRYGIEPGAEHYACVVDLLG--RSGLVDRAYEFIKRMPILPTISVWGALL 490
Query: 107 SGYVNNNRIDV----ARKLFEVMPEK--NEVSWTAMLMGYTQCGRIQDAWELFKAM 156
+ + + A KLFE+ P+ N V ++ ML GR ++A + K M
Sbjct: 491 GACKMHGKTKLGKIAAEKLFELDPDDSGNHVVFSNML---ASAGRWEEATIVRKEM 543
>gi|347954516|gb|AEP33758.1| organelle transcript processing 82, partial [Barbarea verna]
Length = 710
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 238/649 (36%), Positives = 366/649 (56%), Gaps = 50/649 (7%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPE----KNVVSWTVMLGGFIRDSRIDDA 56
+ E N++ W M RG+ A L+ M N ++ +L + +
Sbjct: 63 IQEPNLLIWNTMFRGHALSSDPVSAIKLYVCMISLGLLPNSYTFPFLLKSCAKLKVSKEG 122
Query: 57 RRL----FDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+++ + E D+ T+++ Y ++GR + ++FD ++V+S+T +I+GY +
Sbjct: 123 QQIHGHVLKLGYELDLYVHTSLISMYVKNGRWKDAHKVFDGSSHRDVVSYTALITGYASR 182
Query: 113 NRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAM----------PMKSVV 162
I+ A+K+F+ +P K+ VSW A++ GY G ++A +LFK M M +VV
Sbjct: 183 GYIESAQKMFDEIPVKDVVSWNAIISGYADTGNNKEALDLFKEMMKTNVKPDESTMVTVV 242
Query: 163 A----SNSMILG-----------LGQN--------------GEVQKARVVFDQMREKDDA 193
+ S S+ LG LG N GEV+ A +F + KD
Sbjct: 243 SACAQSGSIQLGRQVHSWIDDHGLGSNLKIVNALIDLYSKCGEVETACGLFQGLSNKDVI 302
Query: 194 TWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQL 253
+W+ MI Y E + LF M + G N +++S+L CA L ++D GR +H +
Sbjct: 303 SWNTMIGGYTHLNLYKEALLLFQEMLRSGENPNDVTMLSILPACAQLGAIDFGRWIHVYI 362
Query: 254 VRCQFDVD--VYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEK 311
+ V + + LI MY KCG++ +F++ + + N++I G+A +G
Sbjct: 363 DKRIKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMHHRTLSACNAMIFGFAMHGRANA 422
Query: 312 SLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMV 371
+ +F M +G+ PDD+T VG+LSACS++G + GR IF SM Y + PK EHY CM+
Sbjct: 423 AFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRRIFRSMTQNYKITPKLEHYGCMI 482
Query: 372 DLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAG 431
DLLG G ++A ++I M EPD +IW SLL AC+ H ++L E A+KL+++EP+N G
Sbjct: 483 DLLGHLGLFKEAEEMINTMTMEPDGVIWCSLLKACKMHGNVELGESFAQKLIKIEPENPG 542
Query: 432 PYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHP 491
Y+LLSNIYA+ GR+++VA +R + + + K PGCS IE++ VH F D HP +
Sbjct: 543 SYVLLSNIYATAGRWNEVANIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKF-HPRNR 601
Query: 492 MIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPI 551
I MLE++ LL EAG+ PD+S VL +++EE K +LR+HSEKLA+A+GL+ G +
Sbjct: 602 EIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEFKQGALRHHSEKLAIAFGLISTKPGTKL 661
Query: 552 RVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
++KNLRVC +CH A KLISK+ REII RD RFHHF+DG+CSC DYW
Sbjct: 662 TIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 710
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 112/467 (23%), Positives = 201/467 (43%), Gaps = 82/467 (17%)
Query: 89 EIFDEMPKKNVISWTTMISGYVNNNRIDVARKLF-------------------------E 123
+F+ + + N++ W TM G+ ++ A KL+ +
Sbjct: 58 SVFETIQEPNLLIWNTMFRGHALSSDPVSAIKLYVCMISLGLLPNSYTFPFLLKSCAKLK 117
Query: 124 VMPEKNEVSWTAMLMG--------------YTQCGRIQDAWELFKAMPMKSVVASNSMIL 169
V E ++ + +G Y + GR +DA ++F + VV+ ++I
Sbjct: 118 VSKEGQQIHGHVLKLGYELDLYVHTSLISMYVKNGRWKDAHKVFDGSSHRDVVSYTALIT 177
Query: 170 GLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPS 229
G G ++ A+ +FD++ KD +W+ +I Y G E +DLF M K V+ + +
Sbjct: 178 GYASRGYIESAQKMFDEIPVKDVVSWNAIISGYADTGNNKEALDLFKEMMKTNVKPDEST 237
Query: 230 LISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFA 289
+++V+S CA S+ GRQVH+ + ++ + + LI +Y KCGE+ +F +
Sbjct: 238 MVTVVSACAQSGSIQLGRQVHSWIDDHGLGSNLKIVNALIDLYSKCGEVETACGLFQGLS 297
Query: 290 SKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGRE 349
+KD++ WN++I GY L +++L +F EM SG P+DVT++ +L AC+ G + GR
Sbjct: 298 NKDVISWNTMIGGYTHLNLYKEALLLFQEMLRSGENPNDVTMLSILPACAQLGAIDFGRW 357
Query: 350 IFESMKSKYL-VEPKTEHYACMVDLLGRAGQVEDAMKLIEAMP----------------- 391
I + + V + ++D+ + G +E A ++ +M
Sbjct: 358 IHVYIDKRIKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMHHRTLSACNAMIFGFAMH 417
Query: 392 -----------------FEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQ---LEPKNAG 431
EPD I + LL AC LDL + + Q + PK
Sbjct: 418 GRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRRIFRSMTQNYKITPK-LE 476
Query: 432 PYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHM 478
Y + ++ G F + E+ M ++P G W + K M
Sbjct: 477 HYGCMIDLLGHLGLFKEAEEMINTM----TMEPDGVIWCSLLKACKM 519
>gi|115464255|ref|NP_001055727.1| Os05g0455900 [Oryza sativa Japonica Group]
gi|53749358|gb|AAU90217.1| unknow protein [Oryza sativa Japonica Group]
gi|113579278|dbj|BAF17641.1| Os05g0455900 [Oryza sativa Japonica Group]
gi|222631826|gb|EEE63958.1| hypothetical protein OsJ_18783 [Oryza sativa Japonica Group]
Length = 874
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 223/614 (36%), Positives = 350/614 (57%), Gaps = 15/614 (2%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQ----MPEKNVVSWTVMLGGFIRDSRIDDA 56
M R++VSW ++ G EA LF + M + ++ ++ ++ A
Sbjct: 262 METRDMVSWNTLMAGLQLNECELEALQLFHESRATMGKMTQSTYATVIKLCANLKQLALA 321
Query: 57 RRLFDMMPEKDVVAQTNMVLG----YCQDGRVDEGREIFD-EMPKKNVISWTTMISGYVN 111
R+L + + N++ Y + G + + IF +NV+SWT +ISG +
Sbjct: 322 RQLHSCVLKHGFHLTGNVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQ 381
Query: 112 NNRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSM 167
N I +A LF M E NE +++AML Q ++ K ++
Sbjct: 382 NGDIPLAVVLFSRMREDRVMPNEFTYSAMLKASLSILPPQIHAQVIKTNYQHIPFVGTAL 441
Query: 168 ILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNF 227
+ + G + A +F + +KD WS M+ + + G LF M +G++ N
Sbjct: 442 LASYSKFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQAGDCEGATYLFNKMAIQGIKPNE 501
Query: 228 PSLISVLSVCAS-LASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFD 286
++ SV+ CA A +D GRQ HA ++ ++ + V+S L++MY + G + +++F+
Sbjct: 502 FTISSVIDACACPSAGVDQGRQFHAISIKYRYHDAICVSSALVSMYSRKGNIDSAQIVFE 561
Query: 287 NFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKE 346
+D+V WNS+ISGYAQ+G K+++ F +M +SG+ D VT + V+ C++ G V E
Sbjct: 562 RQTDRDLVSWNSMISGYAQHGYSMKAIETFRQMEASGIQMDGVTFLAVIMGCTHNGLVVE 621
Query: 347 GREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGAC 406
G++ F+SM + + P EHYACMVDL RAG++++ M LI MPF A++W +LLGAC
Sbjct: 622 GQQYFDSMVRDHKINPTMEHYACMVDLYSRAGKLDETMSLIRDMPFPAGAMVWRTLLGAC 681
Query: 407 RTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPG 466
R H ++L + +A KLL LEP ++ Y+LLSNIYA+ G++ + E+RK M R V K G
Sbjct: 682 RVHKNVELGKFSADKLLSLEPHDSSTYVLLSNIYAAAGKWKERDEVRKLMDYRKVKKEAG 741
Query: 467 CSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKV 526
CSWI+++ KVH F D SHP I + L+ I L++ GY P++SFVLHD+ E++K
Sbjct: 742 CSWIQIKNKVHSFIAFD-KSHPMSDQIYKKLKVIITRLKQDGYSPNTSFVLHDIAEDQKE 800
Query: 527 HSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRF 586
L HSE+LA+A+GL+ P G P++++KNLRVCGDCH +K++S + REII+RD +RF
Sbjct: 801 AMLVAHSERLALAFGLIATPPGTPLQIVKNLRVCGDCHMVMKMVSMIEDREIIMRDCSRF 860
Query: 587 HHFKDGLCSCRDYW 600
HHF G CSC D+W
Sbjct: 861 HHFNGGACSCGDFW 874
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 91/372 (24%), Positives = 162/372 (43%), Gaps = 42/372 (11%)
Query: 56 ARRLFDMMPEKDVVAQTNMVL-GYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNR 114
AR D +P +D N VL Y + G V E + F + V+ + +S + R
Sbjct: 51 ARYPLDEIPRRDAAVGANRVLFDYARRGMVLEVLDQFSVARRGGVLVDSATLSCVLKACR 110
Query: 115 IDVARKLFEVMP--------EKNEVSW-TAMLMGYTQCGRIQDAWELFKAMPMKSVVASN 165
R L E + ++ EVS T+++ Y +CG + + E+F+ MP K+VV
Sbjct: 111 SVPDRVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVV--- 167
Query: 166 SMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRV 225
TW+ ++ EV+ LF M+ EG+
Sbjct: 168 ----------------------------TWTSLLTGCAHAQMHSEVMALFFRMRAEGIWP 199
Query: 226 NFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIF 285
N + SVLS AS +LD G++VHAQ V+ V+V + L+ MY KCG + K +F
Sbjct: 200 NPFTFASVLSAVASQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVF 259
Query: 286 DNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVK 345
+ ++D+V WN++++G ++L++FHE ++ T V+ C+ ++
Sbjct: 260 NWMETRDMVSWNTLMAGLQLNECELEALQLFHESRATMGKMTQSTYATVIKLCANLKQLA 319
Query: 346 EGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
R++ S K+ + D + G++ DA+ + + + W +++
Sbjct: 320 LARQL-HSCVLKHGFHLTGNVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISG 378
Query: 406 CRTHMKLDLAEV 417
C + + LA V
Sbjct: 379 CIQNGDIPLAVV 390
>gi|125591422|gb|EAZ31772.1| hypothetical protein OsJ_15924 [Oryza sativa Japonica Group]
Length = 855
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 227/653 (34%), Positives = 355/653 (54%), Gaps = 70/653 (10%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
M ER+VVSW M+ + G + EA L +M K V L S + RLF
Sbjct: 220 MAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGV-----RLDSTTYTSSLTACARLF 274
Query: 61 DM-------------MPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWT---- 103
+ +P+ D + ++ Y + G E + +F+ + +N +SWT
Sbjct: 275 SLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIG 334
Query: 104 -------------------------------TMISGYVNNNRIDVARKLFEVMPEKNE-- 130
T+ISG N + + R+L + +
Sbjct: 335 GSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNR 394
Query: 131 --VSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMR 188
V +++ Y +CG +Q+A +F +M + +V+ SMI Q G + KAR FD M
Sbjct: 395 AIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMA 454
Query: 189 EKDDATWSGMIKVYERKGYELEVIDLFTLM-QKEGVRVNFPSLISVLSVCASLASLDHGR 247
++ TW+ M+ Y + G E + + +++ M ++ V ++ + +++ CA + + G
Sbjct: 455 TRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGD 514
Query: 248 QVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYG 307
Q+ V+ ++V VA+ ITMY KCG + + + +FD KD+V WN++I+GY+Q+G
Sbjct: 515 QIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHG 574
Query: 308 LGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHY 367
+G+++ K F +M S G PD ++ V VLS CS++G V+EG+ F+ M + + P EH+
Sbjct: 575 MGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHF 634
Query: 368 ACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEP 427
+CMVDLLGRAG + +A LI+ MP +P A +WG+LL AC+ H +LAE+AAK + +L+
Sbjct: 635 SCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSACKIHGNDELAELAAKHVFELDS 694
Query: 428 KNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSH 487
++G Y+LL+ IY+ G+ D A++RK MR + + K PG SW+EVE KVH+F D VSH
Sbjct: 695 PDSGSYMLLAKIYSDAGKSDDSAQVRKLMRDKGIKKNPGYSWMEVENKVHVFKADD-VSH 753
Query: 488 PEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPE 547
P+ I ++++ + GY E S +HSEKLAVA+G++ LP
Sbjct: 754 PQVIAIRNKMDELMEKIAHLGYV-----------RTESPRSEIHHSEKLAVAFGIMSLPA 802
Query: 548 GVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
+PI +MKNLR+CGDCH+ IKLIS V RE ++RD RFHHFK G CSC DYW
Sbjct: 803 WMPIHIMKNLRICGDCHTVIKLISSVTDREFVIRDGVRFHHFKSGSCSCGDYW 855
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 105/392 (26%), Positives = 191/392 (48%), Gaps = 41/392 (10%)
Query: 41 TVMLGGFIRDSRIDDARRLFDM-MPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNV 99
+L ++ + DARRL + E +V+ M+ GY + G + + E+FD MP+++V
Sbjct: 59 NTLLHAYLSCGALSDARRLLRADIKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDV 118
Query: 100 ISWTTMISGYVNNNRIDVARK-----------LFEVMPEKNEVSW-----------TAML 137
SW T++S D +R E+ P+ + W TA++
Sbjct: 119 ASWNTLMS--------DTSRPAGSWMSCGALGCRELAPQLLGLFWKFDFWGDPDVETALV 170
Query: 138 MGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSG 197
+ +CG + A LF + ++ NSM+ G + + A F+ M E+D +W+
Sbjct: 171 DMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNM 230
Query: 198 MIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQ 257
MI + G E + L M ++GVR++ + S L+ CA L SL G+Q+HA+++R
Sbjct: 231 MIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSL 290
Query: 258 FDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFH 317
+D YVAS LI +Y KCG + K +F++ ++ V W +I G QY KS+++F+
Sbjct: 291 PQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFN 350
Query: 318 EMFSSGVMPDDVTLVGVLSACSYTGKVKEGREI----FESMKSKYLVEPKTEHYACMVDL 373
+M + + D L ++S C + GR++ +S ++ +V + ++ L
Sbjct: 351 QMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNS-----LISL 405
Query: 374 LGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
+ G +++A + +M E D + W S++ A
Sbjct: 406 YAKCGDLQNAEFVFSSMS-ERDIVSWTSMITA 436
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 113/518 (21%), Positives = 230/518 (44%), Gaps = 92/518 (17%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSW-------------------- 40
+ E NV++ M+ GY ++G +++A LF +MP ++V SW
Sbjct: 82 IKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSDTSRPAGSWMSCGAL 141
Query: 41 -------------------------TVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMV 75
T ++ F+R +D A RLF + + + +M+
Sbjct: 142 GCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTIFCRNSML 201
Query: 76 LGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKN-EVSWT 134
GY + +D E F++M +++V+SW MI+ + R+ A L M K + T
Sbjct: 202 AGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDST 261
Query: 135 AMLMGYTQCGRI-------QDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQM 187
T C R+ Q ++ +++P ++++I + G ++A+ VF+ +
Sbjct: 262 TYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSL 321
Query: 188 REKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGR 247
++++ +W+ +I + + ++LF M+ E + ++ +L +++S C + L GR
Sbjct: 322 QDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGR 381
Query: 248 QVHAQLVRCQFDVDVYVASVLITMYIKCGEL----------------------------- 278
Q+H+ ++ + + V++ LI++Y KCG+L
Sbjct: 382 QLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIG 441
Query: 279 --VKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSS-GVMPDDVTLVGVL 335
+K + FD A+++ + WN+++ Y Q+G E LK++ M S V PD VT V +
Sbjct: 442 NIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLF 501
Query: 336 SACSYTGKVKEGREIF-ESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEP 394
C+ G K G +I ++K+ ++ + A + + + G++ +A KL + + +
Sbjct: 502 RGCADIGANKLGDQIIGHTVKAGLILNVSVANAA--ITMYSKCGRISEAQKLFDLLNGK- 558
Query: 395 DAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGP 432
D + W +++ H + + AAK + K A P
Sbjct: 559 DVVSWNAMITGYSQH---GMGKQAAKTFDDMLSKGAKP 593
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 71/168 (42%), Gaps = 10/168 (5%)
Query: 229 SLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKG-KLIFDN 287
+L L C S +L R +H +LV V++ + L+ Y+ CG L +L+ +
Sbjct: 22 ALADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRAD 81
Query: 288 FASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGV------MPDDVTLVGVLSACSYT 341
+++ N +++GYA+ G + ++F M V M D G +C
Sbjct: 82 IKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSDTSRPAGSWMSCGAL 141
Query: 342 GKVKEGREIFESM-KSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIE 388
G + ++ K + +P E +VD+ R G V+ A +L
Sbjct: 142 GCRELAPQLLGLFWKFDFWGDPDVE--TALVDMFVRCGYVDFASRLFS 187
>gi|224082698|ref|XP_002306801.1| predicted protein [Populus trichocarpa]
gi|222856250|gb|EEE93797.1| predicted protein [Populus trichocarpa]
Length = 787
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 230/620 (37%), Positives = 362/620 (58%), Gaps = 25/620 (4%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV----VSWTVMLG-----GFIRDS 51
+ E++ ++W +M+ G+ + G+ EA F + + N+ VS +L G++ +
Sbjct: 173 LDEKDNITWNSMIAGFTQNGLYNEALQFFCGLQDANLKPDEVSLISILAASGRLGYLLNG 232
Query: 52 RIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVN 111
+ A + + + + T ++ Y + V +FD+M K++ISWTT+I+ Y
Sbjct: 233 KEIHAYAMKNWLDSNLRIGNT-LIDMYSKCCCVAYAGLVFDKMINKDLISWTTVIAAYAQ 291
Query: 112 NNRIDVARKLFEVMPEKNEVSWTAMLMGYT--QCGRIQ--------DAWELFKAMPMKSV 161
NN A KL + K + M++G T C ++ + L + + +
Sbjct: 292 NNCHTEALKLLRKVQTKG-MDVDTMMIGSTLLACSGLRCLSHAKEVHGYTLKRGLS--DL 348
Query: 162 VASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKE 221
+ N +I G + A +F+ ++ KD +W+ MI Y G E + +F LM++
Sbjct: 349 MMQNMIIDVYADCGNINYATRMFESIKCKDVVSWTSMISCYVHNGLANEALGVFYLMKET 408
Query: 222 GVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKG 281
V + +L+S+LS ASL++L+ G+++H + R F ++ + L+ MY CG L
Sbjct: 409 SVEPDSITLVSILSAAASLSALNKGKEIHGFIFRKGFMLEGSTVNSLVDMYACCGSLENA 468
Query: 282 KLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYT 341
+F SK +V+W ++I+ Y +G G+ ++++F M ++PD +T + +L ACS++
Sbjct: 469 YKVFICTRSKSLVLWTTMINAYGMHGRGKAAVELFSIMEDQKLIPDHITFLALLYACSHS 528
Query: 342 GKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGS 401
G + EG+ + E+MK KY +EP EHYAC+VDLLGRA +E+A +++M EP A +W +
Sbjct: 529 GLINEGKRLLETMKCKYQLEPWPEHYACLVDLLGRANHLEEAYHFVKSMQIEPTAEVWCA 588
Query: 402 LLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNV 461
LGACR H L E+AA+KLL L+P + G Y+L+SN++A+ GR+ DV E+R M+ +
Sbjct: 589 FLGACRIHSNKKLGEIAAQKLLDLDPDSPGSYVLISNVFAASGRWKDVEEVRMRMKGGGL 648
Query: 462 IKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIG-GLLREAGYCPDSSFVLHDV 520
K PGCSWIEV KVH F RD SHPE I + L +I L +E GY P + VLH+V
Sbjct: 649 KKNPGCSWIEVGNKVHTFLVRD-KSHPESYKIYQKLAQITEKLEKEGGYVPQTKLVLHNV 707
Query: 521 DEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIIL 580
+EEKV L HSE+LA+AYGL+ EG PIR+ KNLRVC DCH+ KL+SK RE+I+
Sbjct: 708 GKEEKVQMLYGHSERLAIAYGLMSTSEGTPIRITKNLRVCVDCHTFCKLVSKFFERELIV 767
Query: 581 RDANRFHHFKDGLCSCRDYW 600
RDA+RFHHF+DG+CSC D+W
Sbjct: 768 RDASRFHHFEDGVCSCGDFW 787
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 117/428 (27%), Positives = 208/428 (48%), Gaps = 24/428 (5%)
Query: 1 MPERN-VVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRL 59
M ERN VVSW +++ Y G EA LF +M + V + T L ++ ++L
Sbjct: 71 MNERNDVVSWNSIISAYSLNGQCMEALGLFREMQKAGVGANTYTLVAALQACEDSSFKKL 130
Query: 60 --------FDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVN 111
DV +V + + G++ IFDE+ +K+ I+W +MI+G+
Sbjct: 131 GMEIHAAILKSNQVLDVYVANALVAMHVRFGKMSYAARIFDELDEKDNITWNSMIAGFTQ 190
Query: 112 NNRIDVARKLFEVMPEKN----EVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVAS--- 164
N + A + F + + N EVS ++L + G + + E+ A MK+ + S
Sbjct: 191 NGLYNEALQFFCGLQDANLKPDEVSLISILAASGRLGYLLNGKEI-HAYAMKNWLDSNLR 249
Query: 165 --NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEG 222
N++I + V A +VFD+M KD +W+ +I Y + E + L +Q +G
Sbjct: 250 IGNTLIDMYSKCCCVAYAGLVFDKMINKDLISWTTVIAAYAQNNCHTEALKLLRKVQTKG 309
Query: 223 VRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGK 282
+ V+ + S L C+ L L H ++VH ++ D+ + +++I +Y CG +
Sbjct: 310 MDVDTMMIGSTLLACSGLRCLSHAKEVHGYTLKRGLS-DLMMQNMIIDVYADCGNINYAT 368
Query: 283 LIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTG 342
+F++ KD+V W S+IS Y GL ++L VF+ M + V PD +TLV +LSA +
Sbjct: 369 RMFESIKCKDVVSWTSMISCYVHNGLANEALGVFYLMKETSVEPDSITLVSILSAAASLS 428
Query: 343 KVKEGREIFESMKSK-YLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGS 401
+ +G+EI + K +++E T + +VD+ G +E+A K+ ++W +
Sbjct: 429 ALNKGKEIHGFIFRKGFMLEGSTVN--SLVDMYACCGSLENAYKVFICTR-SKSLVLWTT 485
Query: 402 LLGACRTH 409
++ A H
Sbjct: 486 MINAYGMH 493
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/354 (24%), Positives = 175/354 (49%), Gaps = 13/354 (3%)
Query: 68 VVAQTNMVLGYCQDGRVDEGREIFDEMPKKN-VISWTTMISGYVNNNRIDVARKLFEVMP 126
V ++V Y + + R++FD M ++N V+SW ++IS Y N + A LF M
Sbjct: 45 VFVANSLVSMYAKCNDILGARKLFDRMNERNDVVSWNSIISAYSLNGQCMEALGLFREMQ 104
Query: 127 EKNEVSWTAMLMGYTQCGR--------IQDAWELFKAMPMKSVVASNSMILGLGQNGEVQ 178
+ + T L+ Q ++ + K+ + V +N+++ + G++
Sbjct: 105 KAGVGANTYTLVAALQACEDSSFKKLGMEIHAAILKSNQVLDVYVANALVAMHVRFGKMS 164
Query: 179 KARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCA 238
A +FD++ EKD+ TW+ MI + + G E + F +Q ++ + SLIS+L+
Sbjct: 165 YAARIFDELDEKDNITWNSMIAGFTQNGLYNEALQFFCGLQDANLKPDEVSLISILAASG 224
Query: 239 SLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNS 298
L L +G+++HA ++ D ++ + + LI MY KC + L+FD +KD++ W +
Sbjct: 225 RLGYLLNGKEIHAYAMKNWLDSNLRIGNTLIDMYSKCCCVAYAGLVFDKMINKDLISWTT 284
Query: 299 IISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKY 358
+I+ YAQ ++LK+ ++ + G+ D + + L ACS + +E+ +
Sbjct: 285 VIAAYAQNNCHTEALKLLRKVQTKGMDVDTMMIGSTLLACSGLRCLSHAKEVHGYTLKRG 344
Query: 359 LVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKL 412
L + ++ ++D+ G + A ++ E++ + D + W S++ +C H L
Sbjct: 345 LSDLMMQNM--IIDVYADCGNINYATRMFESIKCK-DVVSWTSMI-SCYVHNGL 394
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 118/232 (50%), Gaps = 9/232 (3%)
Query: 218 MQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGE 277
M+ GV + + VL C + + G ++H +++C +D V+VA+ L++MY KC +
Sbjct: 1 MRVLGVPFDSFTFPCVLKACGVVEDIHRGAEIHGLIIKCGYDSIVFVANSLVSMYAKCND 60
Query: 278 LVKGKLIFDNFASK-DIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLS 336
++ + +FD + D+V WNSIIS Y+ G ++L +F EM +GV + TLV L
Sbjct: 61 ILGARKLFDRMNERNDVVSWNSIISAYSLNGQCMEALGLFREMQKAGVGANTYTLVAALQ 120
Query: 337 ACSYTGKVKEGREIFES-MKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPD 395
AC + K G EI + +KS +++ + +V + R G++ A ++ + + E D
Sbjct: 121 ACEDSSFKKLGMEIHAAILKSNQVLDVYVAN--ALVAMHVRFGKMSYAARIFDELD-EKD 177
Query: 396 AIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGP-YILLSNIYASQGRF 446
I W S++ + L A + L+ N P + L +I A+ GR
Sbjct: 178 NITWNSMIAGFTQN---GLYNEALQFFCGLQDANLKPDEVSLISILAASGRL 226
>gi|32487551|emb|CAE03754.1| OSJNBa0013K16.3 [Oryza sativa Japonica Group]
Length = 865
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 227/653 (34%), Positives = 355/653 (54%), Gaps = 70/653 (10%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
M ER+VVSW M+ + G + EA L +M K V L S + RLF
Sbjct: 230 MAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGV-----RLDSTTYTSSLTACARLF 284
Query: 61 DM-------------MPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWT---- 103
+ +P+ D + ++ Y + G E + +F+ + +N +SWT
Sbjct: 285 SLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIG 344
Query: 104 -------------------------------TMISGYVNNNRIDVARKLFEVMPEKNE-- 130
T+ISG N + + R+L + +
Sbjct: 345 GSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNR 404
Query: 131 --VSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMR 188
V +++ Y +CG +Q+A +F +M + +V+ SMI Q G + KAR FD M
Sbjct: 405 AIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMA 464
Query: 189 EKDDATWSGMIKVYERKGYELEVIDLFTLM-QKEGVRVNFPSLISVLSVCASLASLDHGR 247
++ TW+ M+ Y + G E + + +++ M ++ V ++ + +++ CA + + G
Sbjct: 465 TRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGD 524
Query: 248 QVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYG 307
Q+ V+ ++V VA+ ITMY KCG + + + +FD KD+V WN++I+GY+Q+G
Sbjct: 525 QIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHG 584
Query: 308 LGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHY 367
+G+++ K F +M S G PD ++ V VLS CS++G V+EG+ F+ M + + P EH+
Sbjct: 585 MGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHF 644
Query: 368 ACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEP 427
+CMVDLLGRAG + +A LI+ MP +P A +WG+LL AC+ H +LAE+AAK + +L+
Sbjct: 645 SCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSACKIHGNDELAELAAKHVFELDS 704
Query: 428 KNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSH 487
++G Y+LL+ IY+ G+ D A++RK MR + + K PG SW+EVE KVH+F D VSH
Sbjct: 705 PDSGSYMLLAKIYSDAGKSDDSAQVRKLMRDKGIKKNPGYSWMEVENKVHVFKADD-VSH 763
Query: 488 PEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPE 547
P+ I ++++ + GY E S +HSEKLAVA+G++ LP
Sbjct: 764 PQVIAIRNKMDELMEKIAHLGYV-----------RTESPRSEIHHSEKLAVAFGIMSLPA 812
Query: 548 GVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
+PI +MKNLR+CGDCH+ IKLIS V RE ++RD RFHHFK G CSC DYW
Sbjct: 813 WMPIHIMKNLRICGDCHTVIKLISSVTDREFVIRDGVRFHHFKSGSCSCGDYW 865
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 107/410 (26%), Positives = 193/410 (47%), Gaps = 51/410 (12%)
Query: 41 TVMLGGFIRDSRIDDARRLFDM-MPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNV 99
+L ++ + DARRL + E +V+ M+ GY + G + + E+FD MP+++V
Sbjct: 43 NTLLHAYLSCGALSDARRLLRADIKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDV 102
Query: 100 ISWTTMISGYVNNNRIDVARKLF-----------------------------EVMPEKNE 130
SW T++SGY R + F E+ P+
Sbjct: 103 ASWNTLMSGYFQARRFLDGLETFVSMHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLG 162
Query: 131 VSW-----------TAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQK 179
+ W TA++ + +CG + A LF + ++ NSM+ G + +
Sbjct: 163 LFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDH 222
Query: 180 ARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCAS 239
A F+ M E+D +W+ MI + G E + L M ++GVR++ + S L+ CA
Sbjct: 223 AIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACAR 282
Query: 240 LASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSI 299
L SL G+Q+HA+++R +D YVAS LI +Y KCG + K +F++ ++ V W +
Sbjct: 283 LFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVL 342
Query: 300 ISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREI----FESMK 355
I G QY KS+++F++M + + D L ++S C + GR++ +S
Sbjct: 343 IGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGH 402
Query: 356 SKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
++ +V + ++ L + G +++A + +M E D + W S++ A
Sbjct: 403 NRAIVVSNS-----LISLYAKCGDLQNAEFVFSSMS-ERDIVSWTSMITA 446
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 119/544 (21%), Positives = 235/544 (43%), Gaps = 118/544 (21%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
+ E NV++ M+ GY ++G +++A LF +MP ++V SW ++ G+ + R D F
Sbjct: 66 IKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETF 125
Query: 61 -------DMMPEK---------------------------------DVVAQTNMVLGYCQ 80
D +P D +T +V + +
Sbjct: 126 VSMHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVR 185
Query: 81 DGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGY 140
G VD +F ++ + + +M++GY ID A + FE M E++ VSW M+
Sbjct: 186 CGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAAL 245
Query: 141 TQCGRIQDAWELF-----KAMPMKSVVASNSMI-------LGLGQN-------------- 174
+Q GR+++A L K + + S ++S+ LG G+
Sbjct: 246 SQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDP 305
Query: 175 -------------GEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKE 221
G ++A+ VF+ +++++ +W+ +I + + ++LF M+ E
Sbjct: 306 YVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAE 365
Query: 222 GVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGEL--- 278
+ ++ +L +++S C + L GRQ+H+ ++ + + V++ LI++Y KCG+L
Sbjct: 366 LMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNA 425
Query: 279 ----------------------------VKGKLIFDNFASKDIVMWNSIISGYAQYGLGE 310
+K + FD A+++ + WN+++ Y Q+G E
Sbjct: 426 EFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMATRNAITWNAMLGAYIQHGAEE 485
Query: 311 KSLKVFHEMFSS-GVMPDDVTLVGVLSACSYTGKVKEGREIF-ESMKSKYLVEPKTEHYA 368
LK++ M S V PD VT V + C+ G K G +I ++K+ ++ + A
Sbjct: 486 DGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAA 545
Query: 369 CMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPK 428
+ + + G++ +A KL + + + D + W +++ H + + AAK + K
Sbjct: 546 --ITMYSKCGRISEAQKLFDLLNGK-DVVSWNAMITGYSQH---GMGKQAAKTFDDMLSK 599
Query: 429 NAGP 432
A P
Sbjct: 600 GAKP 603
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 76/194 (39%), Gaps = 36/194 (18%)
Query: 229 SLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELV--------- 279
+L L C S +L R +H +LV V++ + L+ Y+ CG L
Sbjct: 6 ALADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRAD 65
Query: 280 ------------------KGKL-----IFDNFASKDIVMWNSIISGYAQYGLGEKSLKVF 316
+G L +FD +D+ WN+++SGY Q L+ F
Sbjct: 66 IKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETF 125
Query: 317 HEMFSSG-VMPDDVTLVGVLSACSYTGKVKEGREIFESM-KSKYLVEPKTEHYACMVDLL 374
M SG +P+ T V+ +C G + ++ K + +P E +VD+
Sbjct: 126 VSMHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVE--TALVDMF 183
Query: 375 GRAGQVEDAMKLIE 388
R G V+ A +L
Sbjct: 184 VRCGYVDFASRLFS 197
>gi|225455746|ref|XP_002268440.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Vitis vinifera]
Length = 881
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 225/641 (35%), Positives = 357/641 (55%), Gaps = 52/641 (8%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRI------------DDAR 57
+++ Y + ++EA LF + +KN+VSW M+GG+ R+ + +DA+
Sbjct: 243 NSLIDMYSKCRFLSEAQLLFDKNDKKNIVSWNSMIGGYAREEDVCRTFYLLQKMQTEDAK 302
Query: 58 ------RLFDMMP-----------------------EKDVVAQTNMVLGYCQDGRVDEGR 88
+ +++P + + + + Y + G +
Sbjct: 303 MKADEFTILNVLPVCLERSELQSLKELHGYSWRHGLQSNELVANAFIAAYTRCGALCSSE 362
Query: 89 EIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKN-EVSWTAMLMGYTQCGRIQ 147
+FD M K V SW ++ GY N+ A L+ M + + W + C R++
Sbjct: 363 RVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMK 422
Query: 148 DAW--ELFKAMPMKSVVASNSMILGLGQ------NGEVQKARVVFDQMREKDDATWSGMI 199
E +++ +A + I G+ G+ A+V+FD M + +W+ MI
Sbjct: 423 SLHYGEEIHGFALRNGLAVDPFI-GISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMI 481
Query: 200 KVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFD 259
Y + G E I+LF M +G++ +++ V C+ L++L G+++H ++
Sbjct: 482 AGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLT 541
Query: 260 VDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEM 319
D++V+S +I MY K G + + IFD KD+ WN II+GY +G G+++L++F +M
Sbjct: 542 EDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALELFEKM 601
Query: 320 FSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQ 379
G+ PDD T G+L ACS+ G V++G E F M + + +EPK EHY C+VD+LGRAG+
Sbjct: 602 LRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGR 661
Query: 380 VEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNI 439
++DA++LIE MP +PD+ IW SLL +CR H L L E A KLL+LEP+ Y+L+SN+
Sbjct: 662 IDDALRLIEEMPGDPDSRIWSSLLSSCRIHGNLGLGEKVANKLLELEPEKPENYVLISNL 721
Query: 440 YASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEK 499
+A G++ DV +R M+ + K GCSWIEV KVH F D + PE + +
Sbjct: 722 FAGSGKWDDVRRVRGRMKDIGLQKDAGCSWIEVGGKVHNFLIGDEML-PELEEVRETWRR 780
Query: 500 IGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRV 559
+ + GY PD+ VLHD++EE+K+ LR HSEKLA+++GL+ +G+P+RV KNLR+
Sbjct: 781 LEVKISSIGYTPDTGSVLHDLEEEDKIGILRGHSEKLAISFGLLNTAKGLPVRVYKNLRI 840
Query: 560 CGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
CGDCH+A K ISKV+ R+I++RD RFHHF+DG+CSC DYW
Sbjct: 841 CGDCHNAAKFISKVVNRDIVVRDNKRFHHFRDGICSCGDYW 881
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 107/461 (23%), Positives = 218/461 (47%), Gaps = 48/461 (10%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMP------EKNVVSWTVMLGGFIRDSRID 54
MPERN+VSW +++ G+ E G + E+ F +M +V + +L + I+
Sbjct: 162 MPERNLVSWNSIICGFSENGFLQESFNAFREMLVGEESFVPDVATLVTVLPVCAGEEDIE 221
Query: 55 DARRLFDMMPE----KDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYV 110
+ + + ++++ +++ Y + + E + +FD+ KKN++SW +MI GY
Sbjct: 222 KGMAVHGLAVKLGLNEELMVNNSLIDMYSKCRFLSEAQLLFDKNDKKNIVSWNSMIGGYA 281
Query: 111 NNNRIDVARKLF--------------------EVMP---EKNEVSWTAMLMGYTQCGRIQ 147
DV R + V+P E++E+ L GY+
Sbjct: 282 REE--DVCRTFYLLQKMQTEDAKMKADEFTILNVLPVCLERSELQSLKELHGYS------ 333
Query: 148 DAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGY 207
W + +VA N+ I + G + + VFD M K ++W+ ++ Y +
Sbjct: 334 --WR--HGLQSNELVA-NAFIAAYTRCGALCSSERVFDLMDTKTVSSWNALLCGYAQNSD 388
Query: 208 ELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASV 267
+ +DL+ M G+ ++ ++ S+L C+ + SL +G ++H +R VD ++
Sbjct: 389 PRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGIS 448
Query: 268 LITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPD 327
L+++YI CG+ +++FD + +V WN +I+GY+Q GL ++++ +F +M S G+ P
Sbjct: 449 LLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPY 508
Query: 328 DVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLI 387
++ ++ V ACS ++ G+E+ +L E + ++D+ + G + + ++
Sbjct: 509 EIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVS-SSIIDMYAKGGCIGLSQRIF 567
Query: 388 EAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPK 428
+ + E D W ++ H + A +K+L+L K
Sbjct: 568 DRLR-EKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLK 607
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 99/410 (24%), Positives = 188/410 (45%), Gaps = 61/410 (14%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVV 69
T ++ Y G +++ +F ++ KN+ W ++ + R+ +DA +F +
Sbjct: 38 TRIITMYSMCGSPSDSRMVFDKLRRKNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEH 97
Query: 70 AQTNM----VLGYCQDGRVDEGR-EIFDEMPKK-----NVISWTTMISGYVNNNRIDVAR 119
N V+ C G +D G +I M K +V +I+ Y ++ A
Sbjct: 98 KPDNFTLPCVIKACA-GLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAV 156
Query: 120 KLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAM----------------------- 156
K+FE MPE+N VSW +++ G+++ G +Q+++ F+ M
Sbjct: 157 KVFEHMPERNLVSWNSIICGFSENGFLQESFNAFREMLVGEESFVPDVATLVTVLPVCAG 216
Query: 157 --PMKSVVASNSMILGLGQNGE----------------VQKARVVFDQMREKDDATWSGM 198
++ +A + + + LG N E + +A+++FD+ +K+ +W+ M
Sbjct: 217 EEDIEKGMAVHGLAVKLGLNEELMVNNSLIDMYSKCRFLSEAQLLFDKNDKKNIVSWNSM 276
Query: 199 IKVYERKGYELEVIDLFTLMQK-----EGVRVNFPSLISVLSVCASLASLDHGRQVHAQL 253
I Y R E +V F L+QK ++ + ++++VL VC + L +++H
Sbjct: 277 IGGYAR---EEDVCRTFYLLQKMQTEDAKMKADEFTILNVLPVCLERSELQSLKELHGYS 333
Query: 254 VRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSL 313
R + VA+ I Y +CG L + +FD +K + WN+++ GYAQ K+L
Sbjct: 334 WRHGLQSNELVANAFIAAYTRCGALCSSERVFDLMDTKTVSSWNALLCGYAQNSDPRKAL 393
Query: 314 KVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFE-SMKSKYLVEP 362
++ +M SG+ PD T+ +L ACS + G EI ++++ V+P
Sbjct: 394 DLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDP 443
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 150/316 (47%), Gaps = 18/316 (5%)
Query: 53 IDDARRLFDMMPE-----KDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMIS 107
I+ RRL +M+ D V T ++ Y G + R +FD++ +KN+ W ++S
Sbjct: 14 IEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRKNLFQWNAIVS 73
Query: 108 GYVNNNRIDVARKLFEVMPEKNEVSWTAMLM--------GYTQCGRIQDAWELFKAMPMK 159
Y N + A +F + E + G G Q + M +
Sbjct: 74 AYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQIIHGMATKMDLV 133
Query: 160 S-VVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLF--T 216
S V N++I G+ G V++A VF+ M E++ +W+ +I + G+ E + F
Sbjct: 134 SDVFVGNALIAMYGKCGLVEEAVKVFEHMPERNLVSWNSIICGFSENGFLQESFNAFREM 193
Query: 217 LMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCG 276
L+ +E + +L++VL VCA ++ G VH V+ + ++ V + LI MY KC
Sbjct: 194 LVGEESFVPDVATLVTVLPVCAGEEDIEKGMAVHGLAVKLGLNEELMVNNSLIDMYSKCR 253
Query: 277 ELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFS--SGVMPDDVTLVGV 334
L + +L+FD K+IV WNS+I GYA+ ++ + +M + + + D+ T++ V
Sbjct: 254 FLSEAQLLFDKNDKKNIVSWNSMIGGYAREEDVCRTFYLLQKMQTEDAKMKADEFTILNV 313
Query: 335 LSACSYTGKVKEGREI 350
L C +++ +E+
Sbjct: 314 LPVCLERSELQSLKEL 329
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 122/259 (47%), Gaps = 14/259 (5%)
Query: 175 GEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFT--LMQKEGVRVNFPSLIS 232
G +R+VFD++R K+ W+ ++ Y R + + +F+ + E NF +L
Sbjct: 48 GSPSDSRMVFDKLRRKNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNF-TLPC 106
Query: 233 VLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKD 292
V+ CA L L G+ +H + DV+V + LI MY KCG + + +F++ ++
Sbjct: 107 VIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMPERN 166
Query: 293 IVMWNSIISGYAQYGLGEKSLKVFHEMF--SSGVMPDDVTLVGVLSACSYTGKVKEGREI 350
+V WNSII G+++ G ++S F EM +PD TLV VL C+ +++G +
Sbjct: 167 LVSWNSIICGFSENGFLQESFNAFREMLVGEESFVPDVATLVTVLPVCAGEEDIEKGMAV 226
Query: 351 FESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA----- 405
+ K + + ++D+ + + +A L + + + + W S++G
Sbjct: 227 -HGLAVKLGLNEELMVNNSLIDMYSKCRFLSEAQLLFDKND-KKNIVSWNSMIGGYAREE 284
Query: 406 --CRTHMKLDLAEVAAKKL 422
CRT L + K+
Sbjct: 285 DVCRTFYLLQKMQTEDAKM 303
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 90/173 (52%), Gaps = 4/173 (2%)
Query: 233 VLSVCASLASLDHGRQVHAQL-VRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASK 291
+L C ++ GR++H + QF D + + +ITMY CG +++FD K
Sbjct: 4 LLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRK 63
Query: 292 DIVMWNSIISGYAQYGLGEKSLKVFHEMFS-SGVMPDDVTLVGVLSACSYTGKVKEGREI 350
++ WN+I+S Y + L E ++ +F E+ S + PD+ TL V+ AC+ + G +I
Sbjct: 64 NLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLG-QI 122
Query: 351 FESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
M +K + ++ + G+ G VE+A+K+ E MP E + + W S++
Sbjct: 123 IHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMP-ERNLVSWNSII 174
>gi|225427070|ref|XP_002275784.1| PREDICTED: pentatricopeptide repeat-containing protein At1g31920
[Vitis vinifera]
gi|297742017|emb|CBI33804.3| unnamed protein product [Vitis vinifera]
Length = 605
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 212/528 (40%), Positives = 320/528 (60%), Gaps = 10/528 (1%)
Query: 82 GRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEK----NEVSWTAML 137
G +D IF +M + + TM+ G+V + + A ++ M E+ + ++ +L
Sbjct: 79 GSMDYACSIFRQMDELGSFQFNTMMRGHVKDMNTEEALITYKEMAERGVKPDNFTYPTLL 138
Query: 138 MGYTQCGRIQDAWE----LFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDA 193
+ +++ + + K V NS+I G+ GE+ VF+QM E+ A
Sbjct: 139 KACARLPAVEEGMQVHAHILKLGLENDVFVQNSLISMYGKCGEIGVCCAVFEQMNERSVA 198
Query: 194 TWSGMIKVYERKGYELEVIDLFTLMQKEGV-RVNFPSLISVLSVCASLASLDHGRQVHAQ 252
+WS +I + G + + L M EG R L+SVLS C L +LD GR VH
Sbjct: 199 SWSALITAHASLGMWSDCLRLLGDMSNEGYWRAEESILVSVLSACTHLGALDLGRSVHGF 258
Query: 253 LVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKS 312
L+R ++V V + LI MY+KCG L KG +F A K+ + ++ +ISG A +G G +
Sbjct: 259 LLRNVSGLNVIVETSLIEMYLKCGSLYKGMCLFQKMAKKNKLSYSVMISGLAMHGYGREG 318
Query: 313 LKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVD 372
L++F EM G+ PDD+ VGVL+ACS+ G V+EG + F MK ++ +EP +HY CMVD
Sbjct: 319 LRIFTEMLEQGLEPDDIVYVGVLNACSHAGLVQEGLQCFNRMKLEHGIEPTIQHYGCMVD 378
Query: 373 LLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGP 432
L+GRAG++++A++LI++MP EP+ ++W SLL A + H L E+AAK+L +L+ + A
Sbjct: 379 LMGRAGKIDEALELIKSMPMEPNDVLWRSLLSASKVHNNLQAGEIAAKQLFKLDSQKASD 438
Query: 433 YILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPM 492
Y++LSN+YA R+ DVA+ R NM + + + PG S +EV++K+H F +D HP+
Sbjct: 439 YVVLSNMYAQAQRWEDVAKTRTNMFSKGLSQRPGFSLVEVKRKMHRFVSQD-AGHPQSES 497
Query: 493 IMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIR 552
+ ML ++ L+ GY PD++ VL DVDEEEK L HS+KLA+AY L+ +G PIR
Sbjct: 498 VYEMLYQMEWQLKFEGYSPDTTQVLCDVDEEEKKQRLSGHSQKLAIAYALIHTSQGSPIR 557
Query: 553 VMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
+++NLR+C DCH+ KLIS + REI +RD +RFHHFKDG CSCRDYW
Sbjct: 558 IVRNLRMCNDCHTYTKLISIIFDREITVRDRHRFHHFKDGACSCRDYW 605
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 117/268 (43%), Gaps = 23/268 (8%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV----VSWTVMLGGFIRDSRIDDA 56
M E + M+RG+V++ EA + +M E+ V ++ +L R +++
Sbjct: 91 MDELGSFQFNTMMRGHVKDMNTEEALITYKEMAERGVKPDNFTYPTLLKACARLPAVEEG 150
Query: 57 RR----LFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+ + + E DV Q +++ Y + G + +F++M +++V SW+ +I+ + +
Sbjct: 151 MQVHAHILKLGLENDVFVQNSLISMYGKCGEIGVCCAVFEQMNERSVASWSALITAHASL 210
Query: 113 NRIDVARKLFEVMPEKNEVSWTA------------MLMGYTQCGRIQDAWELFKAMPMKS 160
+L M NE W A +G GR + L + + +
Sbjct: 211 GMWSDCLRLLGDMS--NEGYWRAEESILVSVLSACTHLGALDLGRSVHGF-LLRNVSGLN 267
Query: 161 VVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQK 220
V+ S+I + G + K +F +M +K+ ++S MI GY E + +FT M +
Sbjct: 268 VIVETSLIEMYLKCGSLYKGMCLFQKMAKKNKLSYSVMISGLAMHGYGREGLRIFTEMLE 327
Query: 221 EGVRVNFPSLISVLSVCASLASLDHGRQ 248
+G+ + + VL+ C+ + G Q
Sbjct: 328 QGLEPDDIVYVGVLNACSHAGLVQEGLQ 355
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 112/243 (46%), Gaps = 29/243 (11%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTL--------FWQMPEKNVVSWTVMLGGFIRDSR 52
M ER+V SW+A++ + GM ++ L +W+ E +VS +L
Sbjct: 192 MNERSVASWSALITAHASLGMWSDCLRLLGDMSNEGYWRAEESILVS---VLSACTHLGA 248
Query: 53 IDDARRLFDMMPEK----DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISG 108
+D R + + +V+ +T+++ Y + G + +G +F +M KKN +S++ MISG
Sbjct: 249 LDLGRSVHGFLLRNVSGLNVIVETSLIEMYLKCGSLYKGMCLFQKMAKKNKLSYSVMISG 308
Query: 109 YVNNNRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAMPMK----- 159
+ ++F M E+ +++ + +L + G +Q+ + F M ++
Sbjct: 309 LAMHGYGREGLRIFTEMLEQGLEPDDIVYVGVLNACSHAGLVQEGLQCFNRMKLEHGIEP 368
Query: 160 SVVASNSMILGLGQNGEVQKARVVFDQM-REKDDATWSGMI---KVYER-KGYELEVIDL 214
++ M+ +G+ G++ +A + M E +D W ++ KV+ + E+ L
Sbjct: 369 TIQHYGCMVDLMGRAGKIDEALELIKSMPMEPNDVLWRSLLSASKVHNNLQAGEIAAKQL 428
Query: 215 FTL 217
F L
Sbjct: 429 FKL 431
>gi|413943926|gb|AFW76575.1| hypothetical protein ZEAMMB73_444227 [Zea mays]
Length = 869
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 230/669 (34%), Positives = 361/669 (53%), Gaps = 77/669 (11%)
Query: 8 SWTAMVRGYVEEGMITEAGTLFWQM-----PEKNVVSWTVMLGGFIRDSRIDDA-RRLFD 61
++ A++ Y G++ +A LF + P VV+W M+ ++ R +A ++D
Sbjct: 202 AFNALLSMYARLGLVDDAQMLFGSVDTTDSPGGGVVTWNTMVSLLVQSGRCGEAIEVIYD 261
Query: 62 MMPE---KDVVAQTNMVLGYCQDGRVDEGREIF-----DEMPKKNVISWTTMISGYVNNN 113
M+ D + + + Q + GRE+ D N + ++ Y ++
Sbjct: 262 MVARGVRPDGITFASALPACSQLEMLSLGREMHAYVLKDSDLAANSFVASALVDMYASHE 321
Query: 114 RIDVARKLFEVMP--EKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKS-VVASNSMILG 170
R+ VAR++F+++P + W AM+ GY Q G ++A ELF M ++ VV S + I G
Sbjct: 322 RVGVARRVFDMVPGGHRQLGLWNAMVCGYAQAGMDEEALELFARMEAEAGVVPSETTIAG 381
Query: 171 L---------------------------------------GQNGEVQKARVVFDQMREKD 191
+ + G+++ AR +F + +D
Sbjct: 382 VLPACARSETFAGKEAVHGYVLKRGMADNPFVQNALMDLYARLGDMEAARWIFAAIEPRD 441
Query: 192 DATWSGMIKVYERKGYELEVIDLFTLMQKEG------------------VRVNFPSLISV 233
+W+ +I +G+ + L MQ++G V N +L+++
Sbjct: 442 VVSWNTLITGCVVQGHIHDAFQLVREMQQQGRFTDATTEDGIAGTDEEPVVPNNVTLMTL 501
Query: 234 LSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDI 293
L CA LA+ G+++H +R D D+ V S L+ MY KCG L + +FD +++
Sbjct: 502 LPGCAMLAAPAKGKEIHGYAMRHALDSDIAVGSALVDMYAKCGCLALSRAVFDRLPKRNV 561
Query: 294 VMWNSIISGYAQYGLGEKSLKVFHEM-FSSGVMPDDVTLVGVLSACSYTGKVKEGREIFE 352
+ WN +I Y +GLG++++ +F M S+ P++VT + L+ACS++G V G E+F
Sbjct: 562 ITWNVLIMAYGMHGLGDEAIALFDRMVMSNEAKPNEVTFIAALAACSHSGMVDRGMELFH 621
Query: 353 SMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAM-PFEPDAIIWGSLLGACRTHMK 411
SMK + V+P + +AC VD+LGRAG++++A +I +M P E W S LGACR H
Sbjct: 622 SMKRNHGVQPTPDLHACAVDILGRAGRLDEAYSIITSMEPGEQQVSAWSSFLGACRLHRN 681
Query: 412 LDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIE 471
+ L E+AA++L QLEP A Y+LL NIY++ G + +E+R MR+R V K PGCSWIE
Sbjct: 682 VPLGEIAAERLFQLEPDEASHYVLLCNIYSAAGLWEKSSEVRNRMRQRGVSKEPGCSWIE 741
Query: 472 VEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRY 531
++ +H F + +HPE ++ ++ + +R GY PD+S VLHD++E EK LRY
Sbjct: 742 LDGVIHRFMAGES-AHPESTLVHAHMDALWERMRNQGYTPDTSSVLHDIEESEKAAILRY 800
Query: 532 HSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKD 591
HSEKLA+A+GL++ P G IRV KNLRVC DCH A K IS+++GREI+LRD RFHHF D
Sbjct: 801 HSEKLAIAFGLLRTPPGATIRVAKNLRVCNDCHEAAKFISRMVGREIVLRDVRRFHHFVD 860
Query: 592 GLCSCRDYW 600
G CSC DYW
Sbjct: 861 GACSCGDYW 869
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 74/154 (48%), Gaps = 4/154 (2%)
Query: 238 ASLASLDHGRQVHAQLVRCQF--DVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVM 295
A+L SL R +H +R VA+ L+T Y +CG+L +F+ S+D V
Sbjct: 70 AALRSLIAVRSIHGAALRRDLLHGFTPAVANALLTAYARCGDLTAALALFNAMPSRDAVT 129
Query: 296 WNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGK-VKEGREIFE-S 353
+NS+I+ + +L +M G TLV VL ACS+ + ++ GRE +
Sbjct: 130 FNSLIAALCLFRRWLPALDALRDMLLEGHPLSSFTLVSVLLACSHLAEDLRLGREAHAFA 189
Query: 354 MKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLI 387
+K+ +L + + ++ + R G V+DA L
Sbjct: 190 LKNGFLDGDERFAFNALLSMYARLGLVDDAQMLF 223
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 79/180 (43%), Gaps = 23/180 (12%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM-----PEKNVVSWTVMLGGFIRDSRIDD 55
+P+RNV++W ++ Y G+ EA LF +M + N V++ L +D
Sbjct: 556 LPKRNVITWNVLIMAYGMHGLGDEAIALFDRMVMSNEAKPNEVTFIAALAACSHSGMVDR 615
Query: 56 ARRLFDMM-------PEKDVVAQTNMVLGYCQDGRVDEGREIFDEMP--KKNVISWTTMI 106
LF M P D+ A +LG + GR+DE I M ++ V +W++ +
Sbjct: 616 GMELFHSMKRNHGVQPTPDLHACAVDILG--RAGRLDEAYSIITSMEPGEQQVSAWSSFL 673
Query: 107 SGYVNNNRIDV----ARKLFEVMPEKNEVSWTAMLMG-YTQCGRIQDAWELFKAMPMKSV 161
+ + + A +LF++ P+ E S +L Y+ G + + E+ M + V
Sbjct: 674 GACRLHRNVPLGEIAAERLFQLEPD--EASHYVLLCNIYSAAGLWEKSSEVRNRMRQRGV 731
>gi|225448223|ref|XP_002266190.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33990
[Vitis vinifera]
Length = 707
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 213/545 (39%), Positives = 328/545 (60%), Gaps = 12/545 (2%)
Query: 66 KDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVM 125
D+ + +V Y + G + + E+FD M ++V+ WT MI+ Y R A LF M
Sbjct: 165 SDLFVEAALVDMYAKCGEIGDAHEVFDRMLIRDVVCWTAMITLYEQAERPLKALMLFRKM 224
Query: 126 PEK----NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVA----SNSMILGLGQNGEV 177
E+ +E++ ++ Q G + A + + + NS++ + G V
Sbjct: 225 QEEGFLGDEITAISVASAVGQLGDGRMAISVHGYAVLNGFIGDVSVGNSIVGMYAKCGNV 284
Query: 178 QKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVC 237
++AR+VFD+M E++ +W+ M+ Y + G + + LF MQ N + + ++S C
Sbjct: 285 ERARLVFDRMEERNGISWNSMLSGYTQNGRPTDALSLFNQMQASECDPNPVTALIMVSAC 344
Query: 238 ASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDN--FASKDIVM 295
+ L S GR++H ++ + D+D + + ++ MY+KCG+L +F+N +D+
Sbjct: 345 SYLGSKHLGRKLHNFVISSKMDIDTTLRNAIMDMYMKCGDLDTAVEMFNNCELGERDVSS 404
Query: 296 WNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMK 355
WN +ISGY +G G+++L++F M GV P+D+T +LSACS+ G + EGR+ F M
Sbjct: 405 WNVLISGYGVHGHGKEALELFSRMQVEGVEPNDITFTSILSACSHAGLIDEGRKCFADM- 463
Query: 356 SKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLA 415
+K V P+ +HYACMVD+LGRAG + +A +LI+ +P P +WG+LL ACR H +L
Sbjct: 464 TKLSVRPEMKHYACMVDMLGRAGFLNEAFRLIKKIPSRPSDEVWGALLLACRIHGNTELG 523
Query: 416 EVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKK 475
E+AA L QLEP++ G Y+L+SNIYA+ ++ +V +R+NM+ R + KP S IE +
Sbjct: 524 EIAANNLFQLEPEHTGYYVLMSNIYAASNKWKEVEMVRQNMKSRGLKKPAAFSVIEFGTE 583
Query: 476 VHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEK 535
VH F D S P + + R +E + ++ GY PD S VLHDV+ E+K H L YHSEK
Sbjct: 584 VHGFHTAD-QSSPYYREVYRKVESLAIEMKMVGYVPDLSCVLHDVEPEDKEHLLNYHSEK 642
Query: 536 LAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCS 595
LAVA+G++K+ +G+PI+V KNLRVC DCH A K IS + GR+II+RD NRFHHF+ G CS
Sbjct: 643 LAVAFGIMKMDQGMPIQVTKNLRVCSDCHWAFKFISSIYGRKIIVRDGNRFHHFQGGRCS 702
Query: 596 CRDYW 600
C DYW
Sbjct: 703 CGDYW 707
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 123/249 (49%), Gaps = 18/249 (7%)
Query: 167 MILGLGQNGEVQKARVVFDQ--------MREKDDATWSGMIKVYERKGYELEVIDLFTLM 218
+I+ + G++ AR +FD + + + M++ Y G E IDL+ M
Sbjct: 64 LIILYSKLGDLHSARTLFDHRHHHHHGHTQAPNSFLCNTMLRAYANAGRSYEAIDLYIYM 123
Query: 219 QKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGEL 278
Q+ GV VN + VL VCAS G VH Q+VR F D++V + L+ MY KCGE+
Sbjct: 124 QRMGVGVNNFTYPFVLKVCASELGAVFGEVVHGQVVRTGFGSDLFVEAALVDMYAKCGEI 183
Query: 279 VKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSAC 338
+FD +D+V W ++I+ Y Q K+L +F +M G + D++T + V SA
Sbjct: 184 GDAHEVFDRMLIRDVVCWTAMITLYEQAERPLKALMLFRKMQEEGFLGDEITAISVASA- 242
Query: 339 SYTGKVKEGREIFE----SMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEP 394
G++ +GR ++ + ++ + + +V + + G VE A + + M E
Sbjct: 243 --VGQLGDGRMAISVHGYAVLNGFIGDVSVGN--SIVGMYAKCGNVERARLVFDRME-ER 297
Query: 395 DAIIWGSLL 403
+ I W S+L
Sbjct: 298 NGISWNSML 306
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 94/380 (24%), Positives = 179/380 (47%), Gaps = 24/380 (6%)
Query: 4 RNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKN-----VVSWTVMLG-GFIRDSRIDDAR 57
R+VV WTAM+ Y + +A LF +M E+ + + +V G + D R+ +
Sbjct: 196 RDVVCWTAMITLYEQAERPLKALMLFRKMQEEGFLGDEITAISVASAVGQLGDGRMAISV 255
Query: 58 RLFDMMPE--KDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRI 115
+ ++ DV ++V Y + G V+ R +FD M ++N ISW +M+SGY N R
Sbjct: 256 HGYAVLNGFIGDVSVGNSIVGMYAKCGNVERARLVFDRMEERNGISWNSMLSGYTQNGRP 315
Query: 116 DVARKLFEVM--PEKNEVSWTAMLM-------GYTQCGRIQDAWELFKAMPMKSVVASNS 166
A LF M E + TA++M G GR + + M + + + +
Sbjct: 316 TDALSLFNQMQASECDPNPVTALIMVSACSYLGSKHLGRKLHNFVISSKMDIDTTLRNAI 375
Query: 167 MILGLGQNGEVQKARVVFD--QMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVR 224
M + + + G++ A +F+ ++ E+D ++W+ +I Y G+ E ++LF+ MQ EGV
Sbjct: 376 MDMYM-KCGDLDTAVEMFNNCELGERDVSSWNVLISGYGVHGHGKEALELFSRMQVEGVE 434
Query: 225 VNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLI 284
N + S+LS C+ +D GR+ A + + ++ + ++ M + G L + +
Sbjct: 435 PNDITFTSILSACSHAGLIDEGRKCFADMTKLSVRPEMKHYACMVDMLGRAGFLNEAFRL 494
Query: 285 FDNFASK-DIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSAC-SYTG 342
S+ +W +++ +G E + +F + P+ ++S + +
Sbjct: 495 IKKIPSRPSDEVWGALLLACRIHGNTELGEIAANNLFQ--LEPEHTGYYVLMSNIYAASN 552
Query: 343 KVKEGREIFESMKSKYLVEP 362
K KE + ++MKS+ L +P
Sbjct: 553 KWKEVEMVRQNMKSRGLKKP 572
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 112/252 (44%), Gaps = 20/252 (7%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMP----EKNVVSWTVMLGGFIRDSRIDDA 56
M ERN +SW +M+ GY + G T+A +LF QM + N V+ +M+
Sbjct: 294 MEERNGISWNSMLSGYTQNGRPTDALSLFNQMQASECDPNPVTALIMVSACSYLGSKHLG 353
Query: 57 RRLFDMMPEK----DVVAQTNMVLGYCQDGRVDEGREIFD--EMPKKNVISWTTMISGYV 110
R+L + + D + ++ Y + G +D E+F+ E+ +++V SW +ISGY
Sbjct: 354 RKLHNFVISSKMDIDTTLRNAIMDMYMKCGDLDTAVEMFNNCELGERDVSSWNVLISGYG 413
Query: 111 NNNRIDVARKLFEVMP----EKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVAS-- 164
+ A +LF M E N++++T++L + G I + + F M SV
Sbjct: 414 VHGHGKEALELFSRMQVEGVEPNDITFTSILSACSHAGLIDEGRKCFADMTKLSVRPEMK 473
Query: 165 --NSMILGLGQNGEVQKA-RVVFDQMREKDDATWSGMIKVYERKG-YELEVIDLFTLMQK 220
M+ LG+ G + +A R++ D W ++ G EL I L Q
Sbjct: 474 HYACMVDMLGRAGFLNEAFRLIKKIPSRPSDEVWGALLLACRIHGNTELGEIAANNLFQL 533
Query: 221 EGVRVNFPSLIS 232
E + L+S
Sbjct: 534 EPEHTGYYVLMS 545
>gi|302141697|emb|CBI18900.3| unnamed protein product [Vitis vinifera]
Length = 637
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 209/553 (37%), Positives = 331/553 (59%), Gaps = 12/553 (2%)
Query: 58 RLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDV 117
R+ + D +V Y + G ++ + +FDEMP K+++SW +++SG +
Sbjct: 87 RVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNKDLVSWNSLMSGLSGRGYLGA 146
Query: 118 ARKLF-----EVMPEKNEVSWTAMLMGYTQCGRIQDAWELFK-----AMPMKSVVASNSM 167
F E + NEV+ +++ G + + L M K+ V NS+
Sbjct: 147 CLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDEGKSLHGVVVKLGMSGKAKVV-NSL 205
Query: 168 ILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNF 227
I G+ G + A +F++M + +W+ M+ ++ GY + +DLF LM++ G+ +
Sbjct: 206 INMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQ 265
Query: 228 PSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDN 287
+++++L C +HA + RC F+ D+ +A+ L+ +Y K G L + IF+
Sbjct: 266 ATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEE 325
Query: 288 FASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEG 347
+D + W ++++GYA + G +++K+F M GV D VT +LSACS++G V+EG
Sbjct: 326 IKDRDRIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEG 385
Query: 348 REIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACR 407
++ FE M Y VEP+ +HY+CMVDLLGR+G++EDA +LI++MP EP + +WG+LLGACR
Sbjct: 386 KKYFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALLGACR 445
Query: 408 THMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGC 467
+ ++L + A++LL L+P + YI+LSNIY++ G + D +++R M++R + + PGC
Sbjct: 446 VYGNVELGKEVAEQLLSLDPSDHRNYIMLSNIYSAAGLWRDASKVRALMKERRLTRNPGC 505
Query: 468 SWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVH 527
S+IE K+H F D + HP I LE++ +REAG P + FVLHD+DEE KV
Sbjct: 506 SFIEHGNKIHRFVVGDQL-HPRSDEIHTKLEELIRKIREAGCAPKTEFVLHDIDEEVKVD 564
Query: 528 SLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFH 587
+ HSEKLA+A+GL+ GVP+ + KNLR+CGDCHS K S + R II+RD+ RFH
Sbjct: 565 MINKHSEKLAIAFGLLVTGSGVPLIITKNLRICGDCHSTAKFASLLEKRTIIIRDSKRFH 624
Query: 588 HFKDGLCSCRDYW 600
HF DGLCSCRDYW
Sbjct: 625 HFADGLCSCRDYW 637
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/407 (19%), Positives = 171/407 (42%), Gaps = 60/407 (14%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM-----PEKNVVSWTVMLGGFIRDSRIDD 55
MP +++VSW +++ G G + F +M + N V+ ++ +D+
Sbjct: 123 MPNKDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDE 182
Query: 56 ARRLFDMMPEKDVVAQTNMVLG----YCQDGRVDEGREIFDEMPKKNVISWTTMISGYVN 111
+ L ++ + + + +V Y + G +D ++F+EMP ++++SW +M+ + +
Sbjct: 183 GKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNH 242
Query: 112 NNRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAMPM----KSVVA 163
N + LF +M ++ + A+L T G + A + + ++
Sbjct: 243 NGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIII 302
Query: 164 SNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGV 223
+ +++ + G + + +F++++++D W+ M+ Y E I LF LM KEGV
Sbjct: 303 ATALLNLYAKLGRLNASEDIFEEIKDRDRIAWTAMLAGYAVHACGREAIKLFDLMVKEGV 362
Query: 224 RVNFPSLISVLSVCASLASLDHGR---QVHAQLVRCQFDVDVYVASVLITMYIKCGELVK 280
V+ + +LS C+ ++ G+ ++ +++ R + +D Y S ++ + + G L
Sbjct: 363 EVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHY--SCMVDLLGRSGRLED 420
Query: 281 GKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVM-PDDVTLVGVLSACS 339
+E+ S M P +L AC
Sbjct: 421 A-----------------------------------YELIKSMPMEPSSGVWGALLGACR 445
Query: 340 YTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKL 386
G V+ G+E+ E + S L +Y + ++ AG DA K+
Sbjct: 446 VYGNVELGKEVAEQLLS--LDPSDHRNYIMLSNIYSAAGLWRDASKV 490
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 100/192 (52%), Gaps = 6/192 (3%)
Query: 213 DLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMY 272
+LF L V SL+ +S C S++ + +HA++++ D ++ L++MY
Sbjct: 51 NLFQLSPPFQVYSIVQSLVFAISSCTSVS---YCSAIHARVIKSLNYSDGFIGDRLVSMY 107
Query: 273 IKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFS-SGVMPDDVTL 331
K G + +FD +KD+V WNS++SG + G L F M + SG P++VTL
Sbjct: 108 FKLGYDEDAQRLFDEMPNKDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTL 167
Query: 332 VGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMP 391
+ V+SAC+ G + EG+ + + K + K + ++++ G+ G ++ A +L E MP
Sbjct: 168 LSVVSACADMGALDEGKSL-HGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMP 226
Query: 392 FEPDAIIWGSLL 403
+ W S++
Sbjct: 227 VR-SLVSWNSMV 237
>gi|359492337|ref|XP_002284789.2| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial-like [Vitis vinifera]
Length = 694
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 209/553 (37%), Positives = 331/553 (59%), Gaps = 12/553 (2%)
Query: 58 RLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDV 117
R+ + D +V Y + G ++ + +FDEMP K+++SW +++SG +
Sbjct: 144 RVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNKDLVSWNSLMSGLSGRGYLGA 203
Query: 118 ARKLF-----EVMPEKNEVSWTAMLMGYTQCGRIQDAWELFK-----AMPMKSVVASNSM 167
F E + NEV+ +++ G + + L M K+ V NS+
Sbjct: 204 CLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDEGKSLHGVVVKLGMSGKAKVV-NSL 262
Query: 168 ILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNF 227
I G+ G + A +F++M + +W+ M+ ++ GY + +DLF LM++ G+ +
Sbjct: 263 INMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQ 322
Query: 228 PSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDN 287
+++++L C +HA + RC F+ D+ +A+ L+ +Y K G L + IF+
Sbjct: 323 ATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEE 382
Query: 288 FASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEG 347
+D + W ++++GYA + G +++K+F M GV D VT +LSACS++G V+EG
Sbjct: 383 IKDRDRIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEG 442
Query: 348 REIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACR 407
++ FE M Y VEP+ +HY+CMVDLLGR+G++EDA +LI++MP EP + +WG+LLGACR
Sbjct: 443 KKYFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALLGACR 502
Query: 408 THMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGC 467
+ ++L + A++LL L+P + YI+LSNIY++ G + D +++R M++R + + PGC
Sbjct: 503 VYGNVELGKEVAEQLLSLDPSDHRNYIMLSNIYSAAGLWRDASKVRALMKERRLTRNPGC 562
Query: 468 SWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVH 527
S+IE K+H F D + HP I LE++ +REAG P + FVLHD+DEE KV
Sbjct: 563 SFIEHGNKIHRFVVGDQL-HPRSDEIHTKLEELIRKIREAGCAPKTEFVLHDIDEEVKVD 621
Query: 528 SLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFH 587
+ HSEKLA+A+GL+ GVP+ + KNLR+CGDCHS K S + R II+RD+ RFH
Sbjct: 622 MINKHSEKLAIAFGLLVTGSGVPLIITKNLRICGDCHSTAKFASLLEKRTIIIRDSKRFH 681
Query: 588 HFKDGLCSCRDYW 600
HF DGLCSCRDYW
Sbjct: 682 HFADGLCSCRDYW 694
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 80/407 (19%), Positives = 171/407 (42%), Gaps = 60/407 (14%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM-----PEKNVVSWTVMLGGFIRDSRIDD 55
MP +++VSW +++ G G + F +M + N V+ ++ +D+
Sbjct: 180 MPNKDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDE 239
Query: 56 ARRLFDMMPEKDVVAQTNMVLG----YCQDGRVDEGREIFDEMPKKNVISWTTMISGYVN 111
+ L ++ + + + +V Y + G +D ++F+EMP ++++SW +M+ + +
Sbjct: 240 GKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNH 299
Query: 112 NNRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAMPM----KSVVA 163
N + LF +M ++ + A+L T G + A + + ++
Sbjct: 300 NGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIII 359
Query: 164 SNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGV 223
+ +++ + G + + +F++++++D W+ M+ Y E I LF LM KEGV
Sbjct: 360 ATALLNLYAKLGRLNASEDIFEEIKDRDRIAWTAMLAGYAVHACGREAIKLFDLMVKEGV 419
Query: 224 RVNFPSLISVLSVCASLASLDHGR---QVHAQLVRCQFDVDVYVASVLITMYIKCGELVK 280
V+ + +LS C+ ++ G+ ++ +++ R + +D Y S ++ + + G L
Sbjct: 420 EVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHY--SCMVDLLGRSGRLED 477
Query: 281 GKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVM-PDDVTLVGVLSACS 339
+E+ S M P +L AC
Sbjct: 478 A-----------------------------------YELIKSMPMEPSSGVWGALLGACR 502
Query: 340 YTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKL 386
G V+ G+E+ E + S L +Y + ++ AG DA K+
Sbjct: 503 VYGNVELGKEVAEQLLS--LDPSDHRNYIMLSNIYSAAGLWRDASKV 547
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 95/176 (53%), Gaps = 6/176 (3%)
Query: 229 SLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNF 288
SL+ +S C S++ + +HA++++ D ++ L++MY K G + +FD
Sbjct: 124 SLVFAISSCTSVS---YCSAIHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEM 180
Query: 289 ASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFS-SGVMPDDVTLVGVLSACSYTGKVKEG 347
+KD+V WNS++SG + G L F M + SG P++VTL+ V+SAC+ G + EG
Sbjct: 181 PNKDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDEG 240
Query: 348 REIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
+ + + K + K + ++++ G+ G ++ A +L E MP + W S++
Sbjct: 241 KSL-HGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVR-SLVSWNSMV 294
>gi|296087599|emb|CBI34855.3| unnamed protein product [Vitis vinifera]
Length = 956
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 236/662 (35%), Positives = 365/662 (55%), Gaps = 71/662 (10%)
Query: 4 RNVVSWTAMVRGYVEEGMITEAGTLFWQM-------------------PEKNVVSWTVML 44
++VVSW A++ GY + GM ++ +F M E + + L
Sbjct: 301 KDVVSWVALLSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQALCL 360
Query: 45 GGFIRDS--------------------RIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRV 84
G++ S + DA +LF M +DVV ++M+ Y GR
Sbjct: 361 HGYVVRSGFNSNVFVGASLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGRG 420
Query: 85 DEGREIFDEMPK--KNVIS-WTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYT 141
E EIFD+M + + + S + + V + L +P K + + M +
Sbjct: 421 GEALEIFDQMIQVMQGITSCYQISMQPQVQPPLAITSCTLATHIPWKVKAFY--MRAHFR 478
Query: 142 QCGRIQDAWELFKAMPMKSVVASNSMILGLGQN----------------GEVQKARVVFD 185
G WE+F P ++ S S I G + A +VF+
Sbjct: 479 WLGHF---WEIFPTYPFQAADMSKSNIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVFE 535
Query: 186 QMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVN----FPSLISVLSV---CA 238
+ W+ MI+ + G L ++L++ M ++G++ + P+ +S+LSV C
Sbjct: 536 DIPNPCSFLWNVMIRGFATDGRFLSSLELYSKMMEKGLKPDNSGVIPNRVSILSVLLACG 595
Query: 239 SLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNS 298
+L +L G H+ +++ F+ D+ VA+ ++ MY KCG L + +FD A KD+V W++
Sbjct: 596 NLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLFDETAGKDLVCWSA 655
Query: 299 IISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKY 358
+I+ Y +G G K++ +F +M +GV P VT VLSACS++G ++EG+ F+ M ++
Sbjct: 656 MIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGLLEEGKMYFQLMTEEF 715
Query: 359 LVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVA 418
++ K +YACMVDLLGRAGQ+ +A+ LIE MP EPDA IWGSLLGACR H LDLAE
Sbjct: 716 VIARKLSNYACMVDLLGRAGQLSEAVDLIENMPVEPDASIWGSLLGACRIHNNLDLAEKI 775
Query: 419 AKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHM 478
A L L+P +AG ++LLSNIYA++ R+++V ++RK M +R K G S +E + +VH
Sbjct: 776 ADHLFHLDPVHAGYHVLLSNIYAAKSRWNEVEKVRKMMARRGANKIQGFSLVEYDNQVHK 835
Query: 479 FTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAV 538
F D SHP+ + LE++ ++ GY P + FVLHD++EE K +L YHSE+LA+
Sbjct: 836 FGVGD-RSHPQWEKLYAKLEELAAPMKHLGYVPLTDFVLHDIEEEAKEAALSYHSERLAI 894
Query: 539 AYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRD 598
A+GL+ G +R+ KNLR+CGDCH+AIKLISK++ R I++RD +RFH F+DG+CSC D
Sbjct: 895 AFGLINTSPGTTLRITKNLRICGDCHNAIKLISKIVNRVILVRDMHRFHRFEDGVCSCGD 954
Query: 599 YW 600
YW
Sbjct: 955 YW 956
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 108/414 (26%), Positives = 176/414 (42%), Gaps = 62/414 (14%)
Query: 16 YVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTN-- 73
Y + + A +F + P NV W L + R+ + ++ RLF +M A N
Sbjct: 46 YAKCASLQAARKVFDETPHPNVHLWNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFT 105
Query: 74 --MVLGYCQDGRVDEGREIFDEMPKKN------VISWTTMISGYVNNNRIDVARKLFEVM 125
+ L C R+ E ++ KKN + + ++ Y ++ A K+FE
Sbjct: 106 IPIALKACAGLRMLELGKVIHGFAKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEF 165
Query: 126 PEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVAS-----NSMILGLGQNGEVQKA 180
+ V WT+M+ GY Q ++A LF M M NS++ + G + A
Sbjct: 166 QRPDTVLWTSMVTGYQQNNDPEEALALFSQMVMMDCFDGDLPLVNSLLNLYAKTGCEKIA 225
Query: 181 RVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASL 240
+F +M EKD +WS MI Y E ++LF M ++ N +++S L CA
Sbjct: 226 ANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAVS 285
Query: 241 ASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSII 300
+L+ G+++H V KD+V W +++
Sbjct: 286 RNLEEGKKIHKIAVW-----------------------------------KDVVSWVALL 310
Query: 301 SGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKE-----GREIFESMK 355
SGYAQ G+ KS+ VF M S G+ PD V +V +L+A S G ++ G +
Sbjct: 311 SGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQALCLHGYVVRSGFN 370
Query: 356 SKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTH 409
S V A +++L + G + DA+KL + M D +IW S++ A H
Sbjct: 371 SNVFVG------ASLIELYSKCGSLGDAVKLFKGMIVR-DVVIWSSMIAAYGIH 417
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 149/316 (47%), Gaps = 34/316 (10%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVV 69
+A+V Y + G + EA +F + + V WT M+ G+ +++ ++A LF
Sbjct: 143 SALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEALALF--------- 193
Query: 70 AQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKN 129
+ MV+ C DG ++P N ++++ Y +A LF MPEK+
Sbjct: 194 --SQMVMMDCFDG----------DLPLVN-----SLLNLYAKTGCEKIAANLFSKMPEKD 236
Query: 130 EVSWTAMLMGYTQCGRIQDAWELFKAM------PMKSVVASNSMILGLGQNGEVQKARVV 183
+SW+ M+ Y +A LF M P V S + +N +++ + +
Sbjct: 237 VISWSTMIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAVSRN--LEEGKKI 294
Query: 184 FDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASL 243
KD +W ++ Y + G + + +F M +G++ + +++ +L+ + L
Sbjct: 295 HKIAVWKDVVSWVALLSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIF 354
Query: 244 DHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGY 303
+H +VR F+ +V+V + LI +Y KCG L +F +D+V+W+S+I+ Y
Sbjct: 355 QQALCLHGYVVRSGFNSNVFVGASLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAY 414
Query: 304 AQYGLGEKSLKVFHEM 319
+G G ++L++F +M
Sbjct: 415 GIHGRGGEALEIFDQM 430
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 107/497 (21%), Positives = 196/497 (39%), Gaps = 94/497 (18%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQ--------------------------------- 31
+ V WT+MV GY + EA LF Q
Sbjct: 169 DTVLWTSMVTGYQQNNDPEEALALFSQMVMMDCFDGDLPLVNSLLNLYAKTGCEKIAANL 228
Query: 32 ---MPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRV---- 84
MPEK+V+SW+ M+ + + ++A LF M EK + V+ Q V
Sbjct: 229 FSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAVSRNL 288
Query: 85 DEGREIFDEMPKKNVISWTTMISGYVNNN----RIDVARKLFEVMPEKNEVSWTAMLMGY 140
+EG++I K+V+SW ++SGY N + V R + + + V+ +L
Sbjct: 289 EEGKKIHKIAVWKDVVSWVALLSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAAS 348
Query: 141 TQCGRIQDAWEL----FKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWS 196
++ G Q A L ++ +V S+I + G + A +F M +D WS
Sbjct: 349 SELGIFQQALCLHGYVVRSGFNSNVFVGASLIELYSKCGSLGDAVKLFKGMIVRDVVIWS 408
Query: 197 GMIKVYERKGYELEVIDLFTLMQK--EGVRVNF-----PSLISVLSVCASLASLDHGRQV 249
MI Y G E +++F M + +G+ + P + L++ + + +V
Sbjct: 409 SMIAAYGIHGRGGEALEIFDQMIQVMQGITSCYQISMQPQVQPPLAITSCTLATHIPWKV 468
Query: 250 HAQLVRCQF------------------------------DVDVYVASVLITMYIKCGELV 279
A +R F D + + MY+ +
Sbjct: 469 KAFYMRAHFRWLGHFWEIFPTYPFQAADMSKSNIFAYGLQYDSRILTKFAIMYVSFNRID 528
Query: 280 KGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMF-------SSGVMPDDVTLV 332
++F++ + +WN +I G+A G SL+++ +M +SGV+P+ V+++
Sbjct: 529 AASIVFEDIPNPCSFLWNVMIRGFATDGRFLSSLELYSKMMEKGLKPDNSGVIPNRVSIL 588
Query: 333 GVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPF 392
VL AC G +++G E F S + E ++D+ + G ++ A L +
Sbjct: 589 SVLLACGNLGALRKG-EWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLFDETAG 647
Query: 393 EPDAIIWGSLLGACRTH 409
+ D + W +++ + H
Sbjct: 648 K-DLVCWSAMIASYGIH 663
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 115/236 (48%), Gaps = 7/236 (2%)
Query: 230 LISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFA 289
L+ + C + S+ Q+H+Q+ + D + A+ L ++Y KC L + +FD
Sbjct: 7 LVDLFQACNNGRSVS---QLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETP 63
Query: 290 SKDIVMWNSIISGYAQYGLGEKSLKVFHEMF-SSGVMPDDVTLVGVLSACSYTGKVKEGR 348
++ +WNS + Y + E++L++FH M ++G PD+ T+ L AC+ ++ G+
Sbjct: 64 HPNVHLWNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGK 123
Query: 349 EIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRT 408
I K + + +V+L + GQ+ +A+K+ E PD ++W S++ +
Sbjct: 124 VIHGFAKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEFQ-RPDTVLWTSMVTGYQQ 182
Query: 409 HMKLDLAEVAAKKLLQLEPKNAGPYIL--LSNIYASQGRFHDVAELRKNMRKRNVI 462
+ + A +++ ++ + ++ L N+YA G A L M +++VI
Sbjct: 183 NNDPEEALALFSQMVMMDCFDGDLPLVNSLLNLYAKTGCEKIAANLFSKMPEKDVI 238
>gi|297834086|ref|XP_002884925.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330765|gb|EFH61184.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 694
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 219/641 (34%), Positives = 355/641 (55%), Gaps = 53/641 (8%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVV 69
T ++ G IT A +F +P V W ++ G+ R++ DA ++ M V
Sbjct: 57 TKLIHASSSYGDITFARQVFDDLPRPQVFPWNAIIRGYSRNNHFQDALLMYSKMQLARVS 116
Query: 70 AQTNMV---------LGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARK 120
+ L + Q GR ++F + +V +I+ Y R+ AR
Sbjct: 117 PDSFTFPHLLKACGGLSHLQMGRFVHA-QVFRLGFEADVFVQNGLIALYAKCRRLGCART 175
Query: 121 LFE--VMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSV----------------- 161
+FE +PE+ VSWTA++ Y Q G +A E+F M V
Sbjct: 176 VFEGLPLPERTIVSWTAIVSAYAQNGEPVEALEIFSQMRKMDVKPDCVALVSVLNAFTCL 235
Query: 162 --------VASNSMILGL--------------GQNGEVQKARVVFDQMREKDDATWSGMI 199
+ ++ M +GL + G+V A+++FD+M+ + W+ MI
Sbjct: 236 QDLEQGRSIHASVMKMGLETEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMI 295
Query: 200 KVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFD 259
Y + G+ + IDLF M + VR + S+ S +S CA + SL+ R + + R +
Sbjct: 296 SGYAKNGFAKDAIDLFHEMINKDVRPDTISITSAISACAQVGSLEQARWMDEYVSRSDYR 355
Query: 260 VDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEM 319
DV+++S LI M+ KCG + + +FD +D+V+W+++I GY +G +++ ++ M
Sbjct: 356 DDVFISSALIDMFAKCGSVECARSVFDRTLDRDVVVWSAMIVGYGLHGQAREAISLYRAM 415
Query: 320 FSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQ 379
GV P+DVT +G+L AC+++G V+EG F M + + + P+ +HYAC++DLLGRAG
Sbjct: 416 ERDGVHPNDVTFLGLLIACNHSGMVREGWWFFNRM-ADHKINPQQQHYACIIDLLGRAGH 474
Query: 380 VEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNI 439
++ A ++I+ MP +P +WG+LL AC+ H ++L + AA++L ++P N G Y+ LSN+
Sbjct: 475 LDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGKYAAQQLFSIDPSNTGHYVQLSNL 534
Query: 440 YASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEK 499
YA+ + VAE+R M+++ + K GCSW+EV ++ F D SHP + I R +E
Sbjct: 535 YAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEGFRVGD-KSHPRYEEIERQVEW 593
Query: 500 IGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRV 559
I L+E G+ + LHD+++EE +L HSE++ +AYGL+ P+G +R+ KNLR
Sbjct: 594 IESRLKEGGFVANKDASLHDLNDEEAEETLCSHSERITIAYGLISTPQGTTLRITKNLRA 653
Query: 560 CGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
C +CH+A KLISK++GREI++RD NRFHHFKDG+CSC DYW
Sbjct: 654 CVNCHAATKLISKLVGREIVVRDTNRFHHFKDGVCSCGDYW 694
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/160 (21%), Positives = 73/160 (45%), Gaps = 2/160 (1%)
Query: 247 RQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQY 306
RQ+HA+L+ ++ + LI G++ + +FD+ + WN+II GY++
Sbjct: 38 RQIHARLLVLGLQFSGFLITKLIHASSSYGDITFARQVFDDLPRPQVFPWNAIIRGYSRN 97
Query: 307 GLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEH 366
+ +L ++ +M + V PD T +L AC ++ GR + + + E
Sbjct: 98 NHFQDALLMYSKMQLARVSPDSFTFPHLLKACGGLSHLQMGRFV-HAQVFRLGFEADVFV 156
Query: 367 YACMVDLLGRAGQVEDAMKLIEAMPFEPDAII-WGSLLGA 405
++ L + ++ A + E +P I+ W +++ A
Sbjct: 157 QNGLIALYAKCRRLGCARTVFEGLPLPERTIVSWTAIVSA 196
>gi|302812982|ref|XP_002988177.1| hypothetical protein SELMODRAFT_127579 [Selaginella moellendorffii]
gi|300143909|gb|EFJ10596.1| hypothetical protein SELMODRAFT_127579 [Selaginella moellendorffii]
Length = 742
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 230/625 (36%), Positives = 364/625 (58%), Gaps = 33/625 (5%)
Query: 4 RNVVSWTAMVRGYVEEGMITEAGTLFWQM----PEKNVVSWTVMLGGFIRDSRIDDARRL 59
RNV+SW+ M + G + EA F M + + +L + + D R +
Sbjct: 123 RNVISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGRMI 182
Query: 60 FDMMP----EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPK--KNVISWTTMISGYVNNN 113
+ E +++ ++ Y + G V+E R++FD M + ++V+SW M+S YV+N+
Sbjct: 183 HSCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSTYVHND 242
Query: 114 RIDVARKLFEVMPEK-NEVSWTAMLMGYTQCGRIQDAW-------ELFKAMPMKSVVASN 165
R A +L++ M + ++V++ ++L + C +D ++ K+V+ N
Sbjct: 243 RGKDAIQLYQRMQLRPDKVTYVSLL---SACSSAEDVGLGRVLHKQIVNDELEKNVIVGN 299
Query: 166 SMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLM---QKEG 222
+++ + G +AR VFD+M ++ +W+ +I Y R+ E LF M +K G
Sbjct: 300 ALVSMYAKCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQMLELEKNG 359
Query: 223 ----VRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGEL 278
V+ + + +++L+ CA +++L+ G+ V Q C D V + ++ +Y KCGE+
Sbjct: 360 SSQRVKPDALAFVTILNACADVSALEQGKMVSEQAASCGLSSDKAVGTAVVNLYGKCGEI 419
Query: 279 VKGKLIFDNFASK-DIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSA 337
+ + IFD S+ D+ +WN++I+ YAQ+G ++LK+F M GV PD + V +L A
Sbjct: 420 EEARRIFDAVCSRPDVQLWNAMIAVYAQFGQSHEALKLFWRMEMEGVRPDSFSFVSILLA 479
Query: 338 CSYTGKVKEGREIFESMKSKYLVEPKT-EHYACMVDLLGRAGQVEDAMKLIEAMPFEPDA 396
CS+TG +G+ F SM ++Y +T +H+ C+ DLLGR G++++A + +E +P +PDA
Sbjct: 480 CSHTGLEDQGKSYFTSMTTEYRNVTRTIQHFGCVADLLGRGGRLKEAEEFLEKLPVKPDA 539
Query: 397 IIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNM 456
+ W SLL ACR H L A+ A KLL+LEP+ A Y+ LSNIYA ++H VA++RK M
Sbjct: 540 VAWTSLLAACRNHRDLKRAKEVANKLLRLEPRCATGYVALSNIYAELQKWHAVAKVRKFM 599
Query: 457 RKRNVIKPPGCSWIEVEKKVHMF-TGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSF 515
++ V K G S IE+ K +H F TG D +HP + I L K+ ++E GY PD+
Sbjct: 600 AEQGVKKERGVSTIEIGKYMHDFATGDD--AHPRNREIREELAKLHSQMKECGYVPDTKM 657
Query: 516 VLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMG 575
VLH VDE+EK L HSE+LA+A GL+ P G P+RV KNLRVC DCH+A KLISK+ G
Sbjct: 658 VLHFVDEQEKERLLFSHSERLAIALGLISTPLGTPLRVTKNLRVCSDCHTATKLISKIAG 717
Query: 576 REIILRDANRFHHFKDGLCSCRDYW 600
R+I++RD RFH FKDG CSC+DYW
Sbjct: 718 RKIVVRDPTRFHLFKDGKCSCQDYW 742
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 109/430 (25%), Positives = 207/430 (48%), Gaps = 30/430 (6%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV----VSWTVMLGGFIRDSRIDDA 56
+ +RN+ SWT +V + G E +M + V V++ LG + D
Sbjct: 18 LEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVTFITALGSCGDPESLRDG 77
Query: 57 RRLFDMMP----EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPK-KNVISWTTMISGYVN 111
R+ M+ E D ++ Y + G + + +F +M + +NVISW+ M +
Sbjct: 78 IRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKMERTRNVISWSIMAGAHAL 137
Query: 112 NNRIDVARKLFEVMPEKN-EVSWTAMLMGYTQCGR---IQDAWELFKAMPMKS----VVA 163
+ + A + F M + + +AM+ + C +QD + + + ++
Sbjct: 138 HGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGRMIHSCIALSGFESELLV 197
Query: 164 SNSMILGLGQNGEVQKARVVFDQMRE--KDDATWSGMIKVYERKGYELEVIDLFTLMQKE 221
+N+++ G+ G V++AR VFD M E +D +W+ M+ Y + I L+ MQ
Sbjct: 198 ANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSTYVHNDRGKDAIQLYQRMQLR 257
Query: 222 GVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKG 281
+V + +S+LS C+S + GR +H Q+V + + +V V + L++MY KCG +
Sbjct: 258 PDKVTY---VSLLSACSSAEDVGLGRVLHKQIVNDELEKNVIVGNALVSMYAKCGSHTEA 314
Query: 282 KLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMF-------SSGVMPDDVTLVGV 334
+ +FD + I+ W +IIS Y + L ++ +F +M S V PD + V +
Sbjct: 315 RAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQMLELEKNGSSQRVKPDALAFVTI 374
Query: 335 LSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEP 394
L+AC+ +++G+ + E S L K A +V+L G+ G++E+A ++ +A+ P
Sbjct: 375 LNACADVSALEQGKMVSEQAASCGLSSDKAVGTA-VVNLYGKCGEIEEARRIFDAVCSRP 433
Query: 395 DAIIWGSLLG 404
D +W +++
Sbjct: 434 DVQLWNAMIA 443
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 87/359 (24%), Positives = 159/359 (44%), Gaps = 55/359 (15%)
Query: 180 ARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCAS 239
A+ FD + +++ +W+G++ + G E + M+++GVR + + I+ L C
Sbjct: 11 AKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVTFITALGSCGD 70
Query: 240 LASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFA-SKDIVMWNS 298
SL G ++H +V + ++D V++ L+ MY KCG L K +F +++++ W+
Sbjct: 71 PESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKMERTRNVISWSI 130
Query: 299 IISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREI-----FES 353
+ +A +G ++L+ F M G+ +V +LSACS V++GR I
Sbjct: 131 MAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGRMIHSCIALSG 190
Query: 354 MKSKYLVEPKTEHYACMVDLLGRAGQVE-------------------------------- 381
+S+ LV ++ + GR G VE
Sbjct: 191 FESELLVAN------AVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSTYVHNDRG 244
Query: 382 -DAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLE-PKNAGPYILLSNI 439
DA++L + M PD + + SLL AC + + L V K+++ E KN L ++
Sbjct: 245 KDAIQLYQRMQLRPDKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVIVGNALVSM 304
Query: 440 YASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLE 498
YA G + + M +R++I SW + + + R V+ H + +MLE
Sbjct: 305 YAKCGSHTEARAVFDKMEQRSII-----SWTTI---ISAYVRRRLVAEACH-LFQQMLE 354
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 78/334 (23%), Positives = 158/334 (47%), Gaps = 22/334 (6%)
Query: 86 EGREIFDEMPKKNVISWTTMISGY-VNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCG 144
+ + FD + ++N+ SWT +++ + ++ + R L + + + CG
Sbjct: 10 DAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVTFITALGSCG 69
Query: 145 RIQDAWELFKAMPMKSVV----------ASNSMILGLGQNGEVQKARVVFDQM-REKDDA 193
D L + + +V SN+++ + G + A+ VF +M R ++
Sbjct: 70 ---DPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKMERTRNVI 126
Query: 194 TWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQL 253
+WS M + G E + F M G++ +++++LS C+S A + GR +H+ +
Sbjct: 127 SWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGRMIHSCI 186
Query: 254 VRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNF--ASKDIVMWNSIISGYAQYGLGEK 311
F+ ++ VA+ ++TMY +CG + + + +FD A +D+V WN ++S Y G+
Sbjct: 187 ALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSTYVHNDRGKD 246
Query: 312 SLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMV 371
+++++ M + PD VT V +LSACS V GR + + + + L E +V
Sbjct: 247 AIQLYQRM---QLRPDKVTYVSLLSACSSAEDVGLGRVLHKQIVNDEL-EKNVIVGNALV 302
Query: 372 DLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
+ + G +A + + M + I W +++ A
Sbjct: 303 SMYAKCGSHTEARAVFDKME-QRSIISWTTIISA 335
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 131/278 (47%), Gaps = 27/278 (9%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDM 62
E+NV+ A+V Y + G TEA +F +M +++++SWT ++ ++R + +A LF
Sbjct: 292 EKNVIVGNALVSMYAKCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQ 351
Query: 63 MPEKDVVAQTNMV----------LGYCQD-GRVDEGREIFDEMPKKNVIS----WTTMIS 107
M E + + V L C D +++G+ + ++ + S T +++
Sbjct: 352 MLELEKNGSSQRVKPDALAFVTILNACADVSALEQGKMVSEQAASCGLSSDKAVGTAVVN 411
Query: 108 GYVNNNRIDVARKLFEVMPEKNEVS-WTAMLMGYTQCGRIQDAWELFKAMPMKSVVASN- 165
Y I+ AR++F+ + + +V W AM+ Y Q G+ +A +LF M M+ V +
Sbjct: 412 LYGKCGEIEEARRIFDAVCSRPDVQLWNAMIAVYAQFGQSHEALKLFWRMEMEGVRPDSF 471
Query: 166 ---SMILGLGQNGEVQKARVVFDQM-REKDDATWS----GMIKVYERKGYELEVIDLFTL 217
S++L G + + F M E + T + G + +G L+ + F
Sbjct: 472 SFVSILLACSHTGLEDQGKSYFTSMTTEYRNVTRTIQHFGCVADLLGRGGRLKEAEEF-- 529
Query: 218 MQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVR 255
++K V+ + + S+L+ C + L ++V +L+R
Sbjct: 530 LEKLPVKPDAVAWTSLLAACRNHRDLKRAKEVANKLLR 567
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 64/140 (45%), Gaps = 3/140 (2%)
Query: 271 MYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVT 330
MY C K FD +++ W +++ +A G +++L+ M GV PD VT
Sbjct: 1 MYAHCDSPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVT 60
Query: 331 LVGVLSACSYTGKVKEGREIFE-SMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEA 389
+ L +C +++G I + + S+ ++PK + ++++ + G + A ++
Sbjct: 61 FITALGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSN--ALLNMYKKCGSLSHAKRVFAK 118
Query: 390 MPFEPDAIIWGSLLGACRTH 409
M + I W + GA H
Sbjct: 119 MERTRNVISWSIMAGAHALH 138
>gi|326519957|dbj|BAK03903.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 598
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 201/458 (43%), Positives = 287/458 (62%), Gaps = 2/458 (0%)
Query: 144 GRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYE 203
GR+ DA L + N++I + G V AR +FD+M E++ +WS M+ Y
Sbjct: 142 GRLADAHLLLRTSAAVDASTFNTLITAHARAGRVADARSLFDEMPERNAVSWSAMVNGYV 201
Query: 204 RKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVY 263
+ G E + +F+ MQ +GVR + L+ VL+ CA L +L+ G+ VH L + V+
Sbjct: 202 QAGDGREALGVFSQMQAQGVRPDDTVLVGVLAACAQLGALEQGKWVHGYLKANNIRMTVF 261
Query: 264 VASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSG 323
+ + L+ MY KCGE+ G +F+ K+++ W ++I G A +G G SL +F +M SSG
Sbjct: 262 LGTALVDMYAKCGEVQLGMEVFEGMKDKNVLAWTTMIKGLAMHGRGSDSLTLFSQMESSG 321
Query: 324 VMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDA 383
V PDD+ +G L AC++TG V +GRE+F SM + Y ++PK EHY CMVDLL R G + +A
Sbjct: 322 VKPDDIAFIGALCACTHTGLVDKGRELFNSMVNNYGIKPKIEHYGCMVDLLARNGLLSEA 381
Query: 384 MKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQ 443
++E MP +PDA+IWG+L+ CR H ++LAE K ++LEP +G Y+LL NIY++
Sbjct: 382 RDMVEKMPMKPDALIWGALMAGCRFHKNVELAEYVIKHWIELEPDKSGAYVLLGNIYSAS 441
Query: 444 GRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGL 503
GR E+R MR++ V K PGCS +E++ +H F D +SHP I+ +I
Sbjct: 442 GRHASAREIRNLMREKGVEKTPGCSNVEIKGVIHQFIVGD-LSHPRIKDILTKWYEIDSR 500
Query: 504 LR-EAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGD 562
+R E GY PD VL D++EEE +L HSEKLA+A+ L+ + +PIR++KNLRVC D
Sbjct: 501 IRLEEGYVPDKKEVLLDIEEEEMESALSRHSEKLAIAFALISTEDYMPIRIVKNLRVCQD 560
Query: 563 CHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
CH KLISKV GREII+RD RFH FKDG CSC+DYW
Sbjct: 561 CHHVTKLISKVYGREIIVRDRTRFHLFKDGTCSCKDYW 598
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 147/325 (45%), Gaps = 29/325 (8%)
Query: 52 RIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVN 111
R+ DA L D ++ + + GRV + R +FDEMP++N +SW+ M++GYV
Sbjct: 143 RLADAHLLLRTSAAVDASTFNTLITAHARAGRVADARSLFDEMPERNAVSWSAMVNGYVQ 202
Query: 112 NNRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRI-QDAW--ELFKAMPMK-SVVA 163
A +F M + ++ +L Q G + Q W KA ++ +V
Sbjct: 203 AGDGREALGVFSQMQAQGVRPDDTVLVGVLAACAQLGALEQGKWVHGYLKANNIRMTVFL 262
Query: 164 SNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGV 223
+++ + GEVQ VF+ M++K+ W+ MIK G + + LF+ M+ GV
Sbjct: 263 GTALVDMYAKCGEVQLGMEVFEGMKDKNVLAWTTMIKGLAMHGRGSDSLTLFSQMESSGV 322
Query: 224 RVNFPSLISVLSVCASLASLDHGRQVHAQLVR---CQFDVDVYVASVLITMYIKCGELVK 280
+ + + I L C +D GR++ +V + ++ Y ++ + + G L +
Sbjct: 323 KPDDIAFIGALCACTHTGLVDKGRELFNSMVNNYGIKPKIEHY--GCMVDLLARNGLLSE 380
Query: 281 GKLIFDNFASK-DIVMWNSIISG---YAQYGLGEKSLKVFHEMFSSGVMPDD----VTLV 332
+ + + K D ++W ++++G + L E +K + E+ PD V L
Sbjct: 381 ARDMVEKMPMKPDALIWGALMAGCRFHKNVELAEYVIKHWIEL-----EPDKSGAYVLLG 435
Query: 333 GVLSACSYTGKVKEGREIFESMKSK 357
+ SA +G+ REI M+ K
Sbjct: 436 NIYSA---SGRHASAREIRNLMREK 457
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 103/217 (47%), Gaps = 18/217 (8%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFI----RDSRIDDA 56
MPERN VSW+AMV GYV+ G EA +F QM + V +L G + + ++
Sbjct: 185 MPERNAVSWSAMVNGYVQAGDGREALGVFSQMQAQGVRPDDTVLVGVLAACAQLGALEQG 244
Query: 57 RRLFDMMPEKD----VVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+ + + + V T +V Y + G V G E+F+ M KNV++WTTMI G +
Sbjct: 245 KWVHGYLKANNIRMTVFLGTALVDMYAKCGEVQLGMEVFEGMKDKNVLAWTTMIKGLAMH 304
Query: 113 NRIDVARKLFEVMP----EKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVAS---- 164
R + LF M + +++++ L T G + ELF +M +
Sbjct: 305 GRGSDSLTLFSQMESSGVKPDDIAFIGALCACTHTGLVDKGRELFNSMVNNYGIKPKIEH 364
Query: 165 -NSMILGLGQNGEVQKARVVFDQMREKDDA-TWSGMI 199
M+ L +NG + +AR + ++M K DA W ++
Sbjct: 365 YGCMVDLLARNGLLSEARDMVEKMPMKPDALIWGALM 401
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 90/192 (46%), Gaps = 12/192 (6%)
Query: 8 SWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKD 67
++ ++ + G + +A +LF +MPE+N VSW+ M+ G+++ +A +F M +
Sbjct: 161 TFNTLITAHARAGRVADARSLFDEMPERNAVSWSAMVNGYVQAGDGREALGVFSQMQAQG 220
Query: 68 VVAQTNMVLGY----CQDGRVDEGREIFDEMPKKN----VISWTTMISGYVNNNRIDVAR 119
V +++G Q G +++G+ + + N V T ++ Y + +
Sbjct: 221 VRPDDTVLVGVLAACAQLGALEQGKWVHGYLKANNIRMTVFLGTALVDMYAKCGEVQLGM 280
Query: 120 KLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGL----GQNG 175
++FE M +KN ++WT M+ G GR D+ LF M V + +G G
Sbjct: 281 EVFEGMKDKNVLAWTTMIKGLAMHGRGSDSLTLFSQMESSGVKPDDIAFIGALCACTHTG 340
Query: 176 EVQKARVVFDQM 187
V K R +F+ M
Sbjct: 341 LVDKGRELFNSM 352
>gi|302761366|ref|XP_002964105.1| hypothetical protein SELMODRAFT_82024 [Selaginella moellendorffii]
gi|300167834|gb|EFJ34438.1| hypothetical protein SELMODRAFT_82024 [Selaginella moellendorffii]
Length = 713
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 232/618 (37%), Positives = 351/618 (56%), Gaps = 23/618 (3%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQMPEK----NVVSWTVMLGGFIRDSRIDDARRLF 60
N SW ++ Y + G A TLF M + N V+ + L + R+L
Sbjct: 97 NAHSWNILMAAYAQNGHPRGAATLFHWMCSQGVRPNAVTLSTALLACTAARNLALGRKLN 156
Query: 61 DMMP----EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRID 116
+++ E D +++++ Y + ++E FD P+K+V+ WT MIS Y +N R
Sbjct: 157 ELIASEALEIDSHVESSLITMYGRCREIEEAERAFDRSPEKDVVCWTAMISAYAHNWRTS 216
Query: 117 VARKLFEVMP-EKNEVSWTAMLMGYTQCGRIQD-----AWELFKA---MPMKSVVASNSM 167
A +L M E ++ + C D A+ A + S V + ++
Sbjct: 217 RALELVRRMDLEGIKLGLPTYVSLLDACASTMDLRNGVAFHQRAAAIGLDRSSTVVAGTL 276
Query: 168 ILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNF 227
+ G+ G V AR V D M + +W+ MI Y + G E I+LF M EG +
Sbjct: 277 VNLYGKCGRVDDARRVLDAMPVRTSVSWTAMIAAYAQNGNAAEAINLFQCMDLEGAEPSD 336
Query: 228 PSLISVLSVCASLASLDHGRQVHAQLVRC-QFDVDVYVASVLITMYIKCGELVKGKLIFD 286
+LISV+ CA L +L G+++HA++ F + + + +ITMY KCG L + +F+
Sbjct: 337 ITLISVVDSCAVLGTLSLGKRIHARIRSSPSFSQSLMLLNAVITMYGKCGNLELAREVFE 396
Query: 287 --NFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMF-SSGVMPDDVTLVGVLSACSYTGK 343
++ +V W ++I YAQ G+GE+++++F EM G P+ VT + VL ACS+ G+
Sbjct: 397 CVPLRTRSVVTWTAMIRAYAQNGVGEEAIELFQEMLIDGGTEPNRVTFLSVLCACSHLGQ 456
Query: 344 VKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLI-EAMPFEPDAIIWGSL 402
+++ E F SM + V P +HY C+VDLLGRAG++ +A KL+ FE D + W +
Sbjct: 457 LEQAWEHFCSMGPDFGVPPAGDHYCCLVDLLGRAGRLGEAEKLLLRHKDFEADVVCWIAF 516
Query: 403 LGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVI 462
L AC+ + L+ ++ AAK++ +LEP+N +LLSN+YA++GR DVA +R M+ V
Sbjct: 517 LSACQMNGDLERSQRAAKRVSELEPENVAGRVLLSNVYAAKGRRADVARIRNEMKSSGVK 576
Query: 463 KPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDE 522
K G SWIE+ +VH F D VSHP I LE++ ++EAGY PD+ VL DVDE
Sbjct: 577 KFAGRSWIEINNRVHEFMVSD-VSHPRKLEIYSELERLHREIKEAGYVPDTKMVLRDVDE 635
Query: 523 EEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRD 582
E+KV L YHSE+LA+A G++ P G +RV+KNLRVC DCH+A K IS+++GR+II+RD
Sbjct: 636 EKKVQLLGYHSERLAMALGIISTPPGTTLRVVKNLRVCSDCHAATKFISQIVGRQIIVRD 695
Query: 583 ANRFHHFKDGLCSCRDYW 600
+RFHHFKDG+CSC DYW
Sbjct: 696 TSRFHHFKDGVCSCGDYW 713
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 126/247 (51%), Gaps = 1/247 (0%)
Query: 159 KSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLM 218
++ N ++ ++G + A++ F ++ + +W+ ++ Y + G+ LF M
Sbjct: 65 RNTFLGNVLVDAYSKHGSLHGAQLAFGRITLHNAHSWNILMAAYAQNGHPRGAATLFHWM 124
Query: 219 QKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGEL 278
+GVR N +L + L C + +L GR+++ + ++D +V S LITMY +C E+
Sbjct: 125 CSQGVRPNAVTLSTALLACTAARNLALGRKLNELIASEALEIDSHVESSLITMYGRCREI 184
Query: 279 VKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSAC 338
+ + FD KD+V W ++IS YA ++L++ M G+ T V +L AC
Sbjct: 185 EEAERAFDRSPEKDVVCWTAMISAYAHNWRTSRALELVRRMDLEGIKLGLPTYVSLLDAC 244
Query: 339 SYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAII 398
+ T ++ G + + L T +V+L G+ G+V+DA ++++AMP ++
Sbjct: 245 ASTMDLRNGVAFHQRAAAIGLDRSSTVVAGTLVNLYGKCGRVDDARRVLDAMPVRT-SVS 303
Query: 399 WGSLLGA 405
W +++ A
Sbjct: 304 WTAMIAA 310
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 101/388 (26%), Positives = 167/388 (43%), Gaps = 41/388 (10%)
Query: 2 PERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFD 61
PE++VV WTAM+ Y + A L +M + + LG S +D D
Sbjct: 195 PEKDVVCWTAMISAYAHNWRTSRALELVRRMDLEG-----IKLGLPTYVSLLDACASTMD 249
Query: 62 M--------------MPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMIS 107
+ + V +V Y + GRVD+ R + D MP + +SWT MI+
Sbjct: 250 LRNGVAFHQRAAAIGLDRSSTVVAGTLVNLYGKCGRVDDARRVLDAMPVRTSVSWTAMIA 309
Query: 108 GYVNNNRIDVARKLFEVM----PEKNEVSWTAM-----LMGYTQCGRIQDAWELFKAMPM 158
Y N A LF+ M E ++++ ++ ++G G+ A
Sbjct: 310 AYAQNGNAAEAINLFQCMDLEGAEPSDITLISVVDSCAVLGTLSLGKRIHARIRSSPSFS 369
Query: 159 KSVVASNSMILGLGQNGEVQKARVVFD--QMREKDDATWSGMIKVYERKGYELEVIDLFT 216
+S++ N++I G+ G ++ AR VF+ +R + TW+ MI+ Y + G E I+LF
Sbjct: 370 QSLMLLNAVITMYGKCGNLELAREVFECVPLRTRSVVTWTAMIRAYAQNGVGEEAIELFQ 429
Query: 217 LMQKE-GVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDV----DVYVASV-LIT 270
M + G N + +SVL C+ L L+ + H + F V D Y V L+
Sbjct: 430 EMLIDGGTEPNRVTFLSVLCACSHLGQLEQAWE-HFCSMGPDFGVPPAGDHYCCLVDLLG 488
Query: 271 MYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVT 330
+ GE K L +F + D+V W + +S G E+S + + S + P++V
Sbjct: 489 RAGRLGEAEKLLLRHKDFEA-DVVCWIAFLSACQMNGDLERSQRAAKRV--SELEPENVA 545
Query: 331 LVGVLSAC-SYTGKVKEGREIFESMKSK 357
+LS + G+ + I MKS
Sbjct: 546 GRVLLSNVYAAKGRRADVARIRNEMKSS 573
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 86/163 (52%), Gaps = 2/163 (1%)
Query: 243 LDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISG 302
LD R++HAQ+ + D + ++ +VL+ Y K G L +L F + WN +++
Sbjct: 48 LDEVRKLHAQIAARKLDRNTFLGNVLVDAYSKHGSLHGAQLAFGRITLHNAHSWNILMAA 107
Query: 303 YAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEP 362
YAQ G + +FH M S GV P+ VTL L AC+ + GR++ E + S+ L E
Sbjct: 108 YAQNGHPRGAATLFHWMCSQGVRPNAVTLSTALLACTAARNLALGRKLNELIASEAL-EI 166
Query: 363 KTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
+ + ++ + GR ++E+A + + P E D + W +++ A
Sbjct: 167 DSHVESSLITMYGRCREIEEAERAFDRSP-EKDVVCWTAMISA 208
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 84/172 (48%), Gaps = 16/172 (9%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM----PEKNVVSWTVMLGGFIRDSRIDDA 56
MP R VSWTAM+ Y + G EA LF M E + ++ ++ +
Sbjct: 296 MPVRTSVSWTAMIAAYAQNGNAAEAINLFQCMDLEGAEPSDITLISVVDSCAVLGTLSLG 355
Query: 57 RRLFDMMPEKDVVAQTNMVLG-----YCQDGRVDEGREIFDEMP--KKNVISWTTMISGY 109
+R+ + +Q+ M+L Y + G ++ RE+F+ +P ++V++WT MI Y
Sbjct: 356 KRIHARIRSSPSFSQSLMLLNAVITMYGKCGNLELAREVFECVPLRTRSVVTWTAMIRAY 415
Query: 110 VNNNRIDVARKLFEVM-----PEKNEVSWTAMLMGYTQCGRIQDAWELFKAM 156
N + A +LF+ M E N V++ ++L + G+++ AWE F +M
Sbjct: 416 AQNGVGEEAIELFQEMLIDGGTEPNRVTFLSVLCACSHLGQLEQAWEHFCSM 467
>gi|224057914|ref|XP_002299387.1| predicted protein [Populus trichocarpa]
gi|222846645|gb|EEE84192.1| predicted protein [Populus trichocarpa]
Length = 814
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 234/664 (35%), Positives = 363/664 (54%), Gaps = 72/664 (10%)
Query: 8 SWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMM---- 63
S A++ Y + G + +A +L ++++V+W M+ F ++ R +A +M
Sbjct: 152 SNNALMAMYAKLGRLDDAKSLLVLFEDRDLVTWNSMISSFSQNERFMEALMFLRLMVLEG 211
Query: 64 --PE------------------------------KDVVAQT----NMVLGYCQDGRVDEG 87
P+ DV+ + +V YC G+V+ G
Sbjct: 212 VKPDGVTFASVLPACSHLDLLRTGKEIHAYALRTDDVIENSFVGSALVDMYCNCGQVESG 271
Query: 88 REIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPE-----KNEVSWTAMLMGYTQ 142
R +FD + + + W MI+GY + + A LF M N + ++++ Y +
Sbjct: 272 RLVFDSVLDRKIGLWNAMIAGYAQSEHDEKALMLFIEMEAAAGLYSNATTMSSIVPAYVR 331
Query: 143 CGRIQDAWELFKAMPMKSVVAS----NSMILGLGQNGEVQKARVVFDQMREKDDATWSGM 198
C I + + + + + N++I + G+++ ++ +FD M ++D +W+ +
Sbjct: 332 CEGISRKEGIHGYVIKRGLETNRYLQNALIDMYSRMGDIKTSKRIFDSMEDRDIVSWNTI 391
Query: 199 IKVYERKGYELEVIDLFTLMQK-------EG---------VRVNFPSLISVLSVCASLAS 242
I Y G + + L MQ+ +G + N +L++VL CASL++
Sbjct: 392 ITSYVICGRSSDALLLLHEMQRIEEKSTYDGDYNDEKQVPFKPNSITLMTVLPGCASLSA 451
Query: 243 LDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISG 302
L G+++HA +R V V S L+ MY KCG L + +FD ++++ WN II
Sbjct: 452 LAKGKEIHAYAIRNLLASQVTVGSALVDMYAKCGCLNLARRVFDQMPIRNVITWNVIIMA 511
Query: 303 YAQYGLGEKSLKVFHEMFSSG-----VMPDDVTLVGVLSACSYTGKVKEGREIFESMKSK 357
Y +G G++SL++F +M + G V P +VT + + ++CS++G V EG +F MK++
Sbjct: 512 YGMHGKGKESLELFEDMVAEGAKGGEVKPTEVTFIALFASCSHSGMVDEGLSLFHKMKNE 571
Query: 358 YLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAI-IWGSLLGACRTHMKLDLAE 416
+ +EP +HYAC+VDL+GRAG+VE+A L+ MP D + W SLLGACR + +++ E
Sbjct: 572 HGIEPAPDHYACIVDLVGRAGKVEEAYGLVNTMPSGFDKVGAWSSLLGACRIYHNIEIGE 631
Query: 417 VAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKV 476
+AA+ LLQL+P A Y+LLSNIY+S G + LR+ M+ V K PGCSWIE +V
Sbjct: 632 IAAENLLQLQPDVASHYVLLSNIYSSAGLWDKAMNLRRRMKAMGVKKEPGCSWIEYGDEV 691
Query: 477 HMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKL 536
H F D +SHP+ + LE + L++ GY PD++ VLHD+DEEEK L HSEKL
Sbjct: 692 HKFLAGD-LSHPQSEKLHDFLETLSERLKKEGYVPDTACVLHDIDEEEKETILCGHSEKL 750
Query: 537 AVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSC 596
A+A+G++ P G IRV KNLRVC DCH+A K ISK+ REIILRDA RFHHFKDG CSC
Sbjct: 751 AIAFGILNTPPGTTIRVAKNLRVCNDCHTASKFISKIEDREIILRDARRFHHFKDGTCSC 810
Query: 597 RDYW 600
DYW
Sbjct: 811 GDYW 814
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 107/463 (23%), Positives = 200/463 (43%), Gaps = 74/463 (15%)
Query: 68 VVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMP- 126
V +V Y + G + + ++FD + +++ +SW ++IS +VA K F +M
Sbjct: 47 VTIDNTLVNMYGKCGGLGDAYKVFDRITERDQVSWNSIISALCRFEEWEVAIKAFRLMLM 106
Query: 127 ---EKNEVSWTAMLMGYTQCGRIQDAW---ELFKAMPMKS---VVASNSMILGLGQNGEV 177
E + + +M + + + W ++ K ++N+++ + G +
Sbjct: 107 EGFEPSSFTLVSMALACSNLRKRDGLWLGKQIHGCCFRKGHWRTFSNNALMAMYAKLGRL 166
Query: 178 QKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVC 237
A+ + ++D TW+ MI + + +E + LM EGV+ + + SVL C
Sbjct: 167 DDAKSLLVLFEDRDLVTWNSMISSFSQNERFMEALMFLRLMVLEGVKPDGVTFASVLPAC 226
Query: 238 ASLASLDHGRQVHAQLVRCQFDV--DVYVASVLITMYIKCGELVKGKLIFDNFASKDIVM 295
+ L L G+++HA +R DV + +V S L+ MY CG++ G+L+FD+ + I +
Sbjct: 227 SHLDLLRTGKEIHAYALRTD-DVIENSFVGSALVDMYCNCGQVESGRLVFDSVLDRKIGL 285
Query: 296 WNSIISGYAQYGLGEKSLKVFHEM-FSSGVMPDDVTLVGVLSA---C------------- 338
WN++I+GYAQ EK+L +F EM ++G+ + T+ ++ A C
Sbjct: 286 WNAMIAGYAQSEHDEKALMLFIEMEAAAGLYSNATTMSSIVPAYVRCEGISRKEGIHGYV 345
Query: 339 -------------------SYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQ 379
S G +K + IF+SM+ + +V T + ++ G+
Sbjct: 346 IKRGLETNRYLQNALIDMYSRMGDIKTSKRIFDSMEDRDIVSWNTIITSYVI-----CGR 400
Query: 380 VEDAMKLIEAM-------------------PFEPDAIIWGSLLGACRTHMKLDLA-EVAA 419
DA+ L+ M PF+P++I ++L C + L E+ A
Sbjct: 401 SSDALLLLHEMQRIEEKSTYDGDYNDEKQVPFKPNSITLMTVLPGCASLSALAKGKEIHA 460
Query: 420 KKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVI 462
+ L L ++YA G + + M RNVI
Sbjct: 461 YAIRNLLASQVTVGSALVDMYAKCGCLNLARRVFDQMPIRNVI 503
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 113/235 (48%), Gaps = 6/235 (2%)
Query: 153 FKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVI 212
F SV N+++ G+ G + A VFD++ E+D +W+ +I R I
Sbjct: 39 FGYGSFSSVTIDNTLVNMYGKCGGLGDAYKVFDRITERDQVSWNSIISALCRFEEWEVAI 98
Query: 213 DLFTLMQKEGVRVNFPSLISVLSVCASLASLDH---GRQVHAQLVRCQFDVDVYVASVLI 269
F LM EG + +L+S+ C++L D G+Q+H R + + + L+
Sbjct: 99 KAFRLMLMEGFEPSSFTLVSMALACSNLRKRDGLWLGKQIHGCCFR-KGHWRTFSNNALM 157
Query: 270 TMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDV 329
MY K G L K + F +D+V WNS+IS ++Q ++L M GV PD V
Sbjct: 158 AMYAKLGRLDDAKSLLVLFEDRDLVTWNSMISSFSQNERFMEALMFLRLMVLEGVKPDGV 217
Query: 330 TLVGVLSACSYTGKVKEGREIFE-SMKSKYLVEPKTEHYACMVDLLGRAGQVEDA 383
T VL ACS+ ++ G+EI ++++ ++E A +VD+ GQVE
Sbjct: 218 TFASVLPACSHLDLLRTGKEIHAYALRTDDVIENSFVGSA-LVDMYCNCGQVESG 271
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 87/185 (47%), Gaps = 13/185 (7%)
Query: 227 FPSLISVLSVCASLASLDHGRQVHAQLVRCQFD--VDVYVASVLITMYIKCGELVKGKLI 284
FP+ VL A + L G+Q+HA + + + V + + L+ MY KCG L +
Sbjct: 13 FPA---VLKAVAGIQELYLGKQIHAHVFKFGYGSFSSVTIDNTLVNMYGKCGGLGDAYKV 69
Query: 285 FDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKV 344
FD +D V WNSIIS ++ E ++K F M G P TLV + ACS K
Sbjct: 70 FDRITERDQVSWNSIISALCRFEEWEVAIKAFRLMLMEGFEPSSFTLVSMALACSNLRKR 129
Query: 345 KE---GREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEP-DAIIWG 400
G++I K +T ++ + + G+++DA L+ + FE D + W
Sbjct: 130 DGLWLGKQIHGCCFRK--GHWRTFSNNALMAMYAKLGRLDDAKSLL--VLFEDRDLVTWN 185
Query: 401 SLLGA 405
S++ +
Sbjct: 186 SMISS 190
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 101/239 (42%), Gaps = 40/239 (16%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM-------------------PEK-NVVSW 40
M +R++VSW ++ YV G ++A L +M P K N ++
Sbjct: 380 MEDRDIVSWNTIITSYVICGRSSDALLLLHEMQRIEEKSTYDGDYNDEKQVPFKPNSITL 439
Query: 41 TVMLGGFIRDSRIDDARRLFDM----MPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPK 96
+L G S + + + + V + +V Y + G ++ R +FD+MP
Sbjct: 440 MTVLPGCASLSALAKGKEIHAYAIRNLLASQVTVGSALVDMYAKCGCLNLARRVFDQMPI 499
Query: 97 KNVISWTTMISGYVNNNRIDVARKLFEVMPEK---------NEVSWTAMLMGYTQCGRIQ 147
+NVI+W +I Y + + + +LFE M + EV++ A+ + G +
Sbjct: 500 RNVITWNVIIMAYGMHGKGKESLELFEDMVAEGAKGGEVKPTEVTFIALFASCSHSGMVD 559
Query: 148 DAWELFKAMPMKSVVASN----SMILGL-GQNGEVQKARVVFDQMREKDD--ATWSGMI 199
+ LF M + + + I+ L G+ G+V++A + + M D WS ++
Sbjct: 560 EGLSLFHKMKNEHGIEPAPDHYACIVDLVGRAGKVEEAYGLVNTMPSGFDKVGAWSSLL 618
>gi|225457427|ref|XP_002282084.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Vitis vinifera]
Length = 643
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 223/589 (37%), Positives = 332/589 (56%), Gaps = 41/589 (6%)
Query: 53 IDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKK--------------- 97
+D ARRLF P DV ++ G + F EM ++
Sbjct: 55 LDYARRLFLHFPNPDVFMHNTLIRGLAESDTPQNSLITFVEMRRRLTAPLDSFSFAFLLK 114
Query: 98 -------------------------NVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVS 132
++ TT++S Y + A+K+FE M E N V+
Sbjct: 115 AAASYRSLESGIQLHCQAIVHGLDTHLFVGTTLVSMYSECGFVAFAKKVFEEMFEPNVVA 174
Query: 133 WTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDD 192
W A++ +CG ++ A +F MP +++ + N M+ G + GE++ AR +F +M KDD
Sbjct: 175 WNAVVTACFRCGDVKGADMMFNRMPFRNLTSWNVMLAGYTKAGELELARKLFLEMPVKDD 234
Query: 193 ATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQ 252
+WS MI + G+ E F +Q+ G+R N SL LS CA +++ G+ +H
Sbjct: 235 VSWSTMIVGFAHNGFFYEAFGFFRELQQVGMRPNEVSLTGALSACADAGAIEFGKILHGF 294
Query: 253 LVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASK-DIVMWNSIISGYAQYGLGEK 311
+ + F V V + L+ Y KCG + +L+F+ K IV W S+I+G A +G GE+
Sbjct: 295 IEKSGFLWMVSVNNALLDTYSKCGNVGMARLVFERMPEKRSIVSWTSMIAGLAMHGYGEE 354
Query: 312 SLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMV 371
++++FHEM SG+ PD + + +L ACS+ G +++G E F MK Y +EP EHY CMV
Sbjct: 355 AIQLFHEMEESGIRPDGIAFISILYACSHAGLIEKGYEYFYKMKDIYNIEPAIEHYGCMV 414
Query: 372 DLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAG 431
DL GRAGQ++ A + I MP P AIIW +LLGAC H + LAE ++L +L+P N+G
Sbjct: 415 DLYGRAGQLDKAYEFIIHMPVLPTAIIWRTLLGACSIHGNVKLAERVKERLSELDPNNSG 474
Query: 432 PYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHP 491
++LLSNIYA G++ DVA +R++M + + K PG S IEV+K ++ F + +
Sbjct: 475 DHVLLSNIYAVAGKWKDVAAVRRSMTDQRMNKTPGWSMIEVDKIMYSFVAGEVQNSITEE 534
Query: 492 MIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPI 551
++ E + L E Y P+ VLHD+++EEK S+ HSEKLAVA+G+ +L +G I
Sbjct: 535 AYEKLKEIMLKLRVEGCYIPEVGSVLHDIEDEEKEDSVSRHSEKLAVAFGIARLCKGSII 594
Query: 552 RVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
R++KNLRVC DCH+ +KLISKV G EI++RD +RFH FK G CSCRDYW
Sbjct: 595 RIVKNLRVCRDCHTVMKLISKVYGLEIVVRDRSRFHSFKTGSCSCRDYW 643
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 155/311 (49%), Gaps = 15/311 (4%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVV 69
T +V Y E G + A +F +M E NVV+W ++ R + A +F+ MP +++
Sbjct: 145 TTLVSMYSECGFVAFAKKVFEEMFEPNVVAWNAVVTACFRCGDVKGADMMFNRMPFRNLT 204
Query: 70 AQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVA----RKLFEVM 125
+ M+ GY + G ++ R++F EMP K+ +SW+TMI G+ +N A R+L +V
Sbjct: 205 SWNVMLAGYTKAGELELARKLFLEMPVKDDVSWSTMIVGFAHNGFFYEAFGFFRELQQVG 264
Query: 126 PEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKS-----VVASNSMILGLGQNGEVQKA 180
NEVS T L G I+ ++ KS V +N+++ + G V A
Sbjct: 265 MRPNEVSLTGALSACADAGAIEFG-KILHGFIEKSGFLWMVSVNNALLDTYSKCGNVGMA 323
Query: 181 RVVFDQMREKDD-ATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCAS 239
R+VF++M EK +W+ MI GY E I LF M++ G+R + + IS+L C+
Sbjct: 324 RLVFERMPEKRSIVSWTSMIAGLAMHGYGEEAIQLFHEMEESGIRPDGIAFISILYACSH 383
Query: 240 LASLDHGRQVHAQLVRCQFDVDVYVA--SVLITMYIKCGELVKG-KLIFDNFASKDIVMW 296
++ G + ++ + ++++ + ++ +Y + G+L K + I ++W
Sbjct: 384 AGLIEKGYEYFYKM-KDIYNIEPAIEHYGCMVDLYGRAGQLDKAYEFIIHMPVLPTAIIW 442
Query: 297 NSIISGYAQYG 307
+++ + +G
Sbjct: 443 RTLLGACSIHG 453
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 83/181 (45%), Gaps = 14/181 (7%)
Query: 232 SVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLI--TMYIKCGELVKGKLIFDNFA 289
S+L+ C SL +L +QVHA + + D D +A L+ + L + +F +F
Sbjct: 10 SLLTNCRSLKNL---KQVHAYVCKTGLDTDPIIAGKLLLHSAVSVPDALDYARRLFLHFP 66
Query: 290 SKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMP-DDVTLVGVLSACSYTGKVKEGR 348
+ D+ M N++I G A+ + SL F EM P D + +L A + ++ G
Sbjct: 67 NPDVFMHNTLIRGLAESDTPQNSLITFVEMRRRLTAPLDSFSFAFLLKAAASYRSLESGI 126
Query: 349 EIFESMKSKYLVEPKTEHY---ACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
+ + + +V H +V + G V A K+ E M FEP+ + W +++ A
Sbjct: 127 Q----LHCQAIVHGLDTHLFVGTTLVSMYSECGFVAFAKKVFEEM-FEPNVVAWNAVVTA 181
Query: 406 C 406
C
Sbjct: 182 C 182
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 60/138 (43%), Gaps = 11/138 (7%)
Query: 1 MPE-RNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV----VSWTVMLGGFIRDSRIDD 55
MPE R++VSWT+M+ G G EA LF +M E + +++ +L I+
Sbjct: 330 MPEKRSIVSWTSMIAGLAMHGYGEEAIQLFHEMEESGIRPDGIAFISILYACSHAGLIEK 389
Query: 56 ARRLFDMMP-----EKDVVAQTNMVLGYCQDGRVDEGREIFDEMP-KKNVISWTTMISGY 109
F M E + MV Y + G++D+ E MP I W T++
Sbjct: 390 GYEYFYKMKDIYNIEPAIEHYGCMVDLYGRAGQLDKAYEFIIHMPVLPTAIIWRTLLGAC 449
Query: 110 VNNNRIDVARKLFEVMPE 127
+ + +A ++ E + E
Sbjct: 450 SIHGNVKLAERVKERLSE 467
>gi|125552577|gb|EAY98286.1| hypothetical protein OsI_20194 [Oryza sativa Indica Group]
Length = 874
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 223/614 (36%), Positives = 350/614 (57%), Gaps = 15/614 (2%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQ----MPEKNVVSWTVMLGGFIRDSRIDDA 56
M R++VSW ++ G EA LF + M + ++ ++ ++ A
Sbjct: 262 METRDMVSWNTLMAGLQLNECELEALQLFHESRATMGKMTQSTYATVIKLCANLKQLALA 321
Query: 57 RRLFDMMPEKDVVAQTNMVLG----YCQDGRVDEGREIFD-EMPKKNVISWTTMISGYVN 111
R+L + + N++ Y + G + + IF +NV+SWT +ISG +
Sbjct: 322 RQLHSCVLKHGFHLTGNVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQ 381
Query: 112 NNRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSM 167
N I +A LF M E NE +++AML Q ++ K ++
Sbjct: 382 NGDIPLAVVLFSRMREDRVMPNEFTYSAMLKASLSILPPQIHAQVIKTNYQHIPSVGTAL 441
Query: 168 ILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNF 227
+ + G + A +F + +KD WS M+ + + G LF M +G++ N
Sbjct: 442 LASYSKFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQAGDCEGATYLFNKMAIQGIKPNE 501
Query: 228 PSLISVLSVCAS-LASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFD 286
++ SV+ CA A +D GRQ HA ++ ++ + V+S L++MY + G + +++F+
Sbjct: 502 FTISSVIDACACPSAGVDQGRQFHAISIKYRYHDAICVSSALVSMYSRKGNIDSAQIVFE 561
Query: 287 NFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKE 346
+D+V WNS+ISGYAQ+G K+++ F +M +SG+ D VT + V+ C++ G V E
Sbjct: 562 RQTDRDLVSWNSMISGYAQHGYSMKAIETFRQMEASGIQMDGVTFLAVIMGCTHNGLVVE 621
Query: 347 GREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGAC 406
G++ F+SM + + P EHYACMVDL RAG++++ M LI MPF A++W +LLGAC
Sbjct: 622 GQQYFDSMVRDHKINPTMEHYACMVDLYSRAGKLDETMSLIRDMPFPAGAMVWRTLLGAC 681
Query: 407 RTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPG 466
R H ++L + +A KLL LEP ++ Y+LLSNIYA+ G++ + E+RK M R V K G
Sbjct: 682 RVHKNVELGKFSADKLLSLEPHDSSTYVLLSNIYAAAGKWKERDEVRKLMDYRKVKKEAG 741
Query: 467 CSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKV 526
CSWI+++ KVH F D SHP I + L+ I L++ GY P++SFVLHD+ E++K
Sbjct: 742 CSWIQIKNKVHSFIAFD-KSHPMSDQIYKKLKVIITRLKQDGYSPNTSFVLHDIAEDQKE 800
Query: 527 HSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRF 586
L HSE+LA+A+GL+ P G P++++KNLRVCGDCH +K++S + REII+RD +RF
Sbjct: 801 AMLVAHSERLALAFGLIATPPGTPLQIVKNLRVCGDCHMVMKMVSMIEDREIIMRDCSRF 860
Query: 587 HHFKDGLCSCRDYW 600
HHF G CSC D+W
Sbjct: 861 HHFNGGACSCGDFW 874
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 91/372 (24%), Positives = 162/372 (43%), Gaps = 42/372 (11%)
Query: 56 ARRLFDMMPEKDVVAQTNMVL-GYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNR 114
AR D +P +D N VL Y + G V E + F + V+ + +S + R
Sbjct: 51 ARYPLDEIPRRDAAVGANRVLFDYARRGMVPEVLDQFSVARRGGVLVDSATLSCVLKACR 110
Query: 115 IDVARKLFEVMP--------EKNEVSW-TAMLMGYTQCGRIQDAWELFKAMPMKSVVASN 165
R L E + ++ EVS T+++ Y +CG + + E+F+ MP K+VV
Sbjct: 111 SVPDRVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVV--- 167
Query: 166 SMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRV 225
TW+ ++ EV+ LF M+ EG+
Sbjct: 168 ----------------------------TWTSLLTGCAHAQMHSEVMALFFRMRAEGIWP 199
Query: 226 NFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIF 285
N + SVLS AS +LD G++VHAQ V+ V+V + L+ MY KCG + K +F
Sbjct: 200 NPFTFASVLSAVASQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVF 259
Query: 286 DNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVK 345
+ ++D+V WN++++G ++L++FHE ++ T V+ C+ ++
Sbjct: 260 NWMETRDMVSWNTLMAGLQLNECELEALQLFHESRATMGKMTQSTYATVIKLCANLKQLA 319
Query: 346 EGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
R++ S K+ + D + G++ DA+ + + + W +++
Sbjct: 320 LARQL-HSCVLKHGFHLTGNVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISG 378
Query: 406 CRTHMKLDLAEV 417
C + + LA V
Sbjct: 379 CIQNGDIPLAVV 390
>gi|449442481|ref|XP_004139010.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Cucumis sativus]
gi|449505311|ref|XP_004162432.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Cucumis sativus]
Length = 679
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 231/621 (37%), Positives = 361/621 (58%), Gaps = 35/621 (5%)
Query: 5 NVVSWTAMVRGYVEE----GMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
NV S + +V ++ + A ++F + KN + ++ G +SR + + F
Sbjct: 69 NVFSSSRVVTQFISSCSSLNSVDYAISIFQRFELKNSYLFNALIRGLAENSRFESSISFF 128
Query: 61 DMM------PE--------KDVVAQTNMVLG---YCQDGRVDEGREIFDEMPKKNVISWT 103
+M P+ K A +N +G +C G + G E FD +
Sbjct: 129 VLMLKWKISPDRLTFPFVLKSAAALSNGGVGRALHC--GILKFGLE-FDSFVR------V 179
Query: 104 TMISGYVNNNRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAMPMK 159
+++ YV + A K+F+ PE + + W ++ GY + G + A ELF +MP K
Sbjct: 180 SLVDMYVKVEELGSALKVFDESPESVKNGSVLIWNVLIHGYCRMGDLVKATELFDSMPKK 239
Query: 160 SVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQ 219
+ NS+I G + G++ +A+ +F +M EK+ +W+ M+ + + G + ++ F M
Sbjct: 240 DTGSWNSLINGFMKMGDMGRAKELFVKMPEKNVVSWTTMVNGFSQNGDPEKALETFFCML 299
Query: 220 KEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELV 279
+EG R N +++S LS CA + +LD G ++H L F +++ + + L+ MY KCG +
Sbjct: 300 EEGARPNDYTIVSALSACAKIGALDAGLRIHNYLSGNGFKLNLVIGTALVDMYAKCGNIE 359
Query: 280 KGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACS 339
+ +F K +++W+ +I G+A +G K+L+ F M +G PD V + VL+ACS
Sbjct: 360 HAEKVFHETKEKGLLIWSVMIWGWAIHGHFRKALQYFEWMKFTGTKPDSVVFLAVLNACS 419
Query: 340 YTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIW 399
++G+V EG + F++M+ YL+EP +HY +VD+LGRAG++++A+K I AMP PD ++W
Sbjct: 420 HSGQVNEGLKFFDNMRRGYLIEPSMKHYTLVVDMLGRAGRLDEALKFIRAMPITPDFVVW 479
Query: 400 GSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKR 459
G+L ACRTH +++AE+A+KKLLQLEPK+ G Y+ LSN YAS GR+ D +R +MR
Sbjct: 480 GALFCACRTHKNVEMAELASKKLLQLEPKHPGSYVFLSNAYASVGRWDDAERVRVSMRDH 539
Query: 460 NVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHD 519
K PG S+IEV+ K+H F D +H I L++I RE GY + VLH+
Sbjct: 540 GAHKDPGWSFIEVDHKLHRFVAGDN-THNRAVEIYSKLDEISASAREKGYTKEIECVLHN 598
Query: 520 VDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREII 579
++EEEK +L YHSEKLA+A+G+V G +R++KNLRVC DCHS +K SK+ REII
Sbjct: 599 IEEEEKEEALGYHSEKLALAFGIVSTRPGTTVRIVKNLRVCVDCHSFMKYASKMSKREII 658
Query: 580 LRDANRFHHFKDGLCSCRDYW 600
LRD RFHHF DG+CSC DYW
Sbjct: 659 LRDMKRFHHFNDGVCSCGDYW 679
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 95/200 (47%), Gaps = 12/200 (6%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MP+++ SW +++ G+++ G + A LF +MPEKNVVSWT M+ GF ++ + A F
Sbjct: 236 MPKKDTGSWNSLINGFMKMGDMGRAKELFVKMPEKNVVSWTTMVNGFSQNGDPEKALETF 295
Query: 61 DMMPEKDVVAQTNMV---LGYCQD-GRVDEGREIFDEMP----KKNVISWTTMISGYVNN 112
M E+ + L C G +D G I + + K N++ T ++ Y
Sbjct: 296 FCMLEEGARPNDYTIVSALSACAKIGALDAGLRIHNYLSGNGFKLNLVIGTALVDMYAKC 355
Query: 113 NRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGL- 171
I+ A K+F EK + W+ M+ G+ G + A + F+ M + + L +
Sbjct: 356 GNIEHAEKVFHETKEKGLLIWSVMIWGWAIHGHFRKALQYFEWMKFTGTKPDSVVFLAVL 415
Query: 172 ---GQNGEVQKARVVFDQMR 188
+G+V + FD MR
Sbjct: 416 NACSHSGQVNEGLKFFDNMR 435
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 82/385 (21%), Positives = 142/385 (36%), Gaps = 77/385 (20%)
Query: 151 ELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELE 210
+L++ S I V A +F + K+ ++ +I+
Sbjct: 64 QLYRCNVFSSSRVVTQFISSCSSLNSVDYAISIFQRFELKNSYLFNALIRGLAENSRFES 123
Query: 211 VIDLFTLMQKEGV---RVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASV 267
I F LM K + R+ FP VL A+L++ GR +H +++ + D +V
Sbjct: 124 SISFFVLMLKWKISPDRLTFPF---VLKSAAALSNGGVGRALHCGILKFGLEFDSFVRVS 180
Query: 268 LITMYIKC-----------------------------------GELVKGKLIFDNFASKD 292
L+ MY+K G+LVK +FD+ KD
Sbjct: 181 LVDMYVKVEELGSALKVFDESPESVKNGSVLIWNVLIHGYCRMGDLVKATELFDSMPKKD 240
Query: 293 IVMWNSII-------------------------------SGYAQYGLGEKSLKVFHEMFS 321
WNS+I +G++Q G EK+L+ F M
Sbjct: 241 TGSWNSLINGFMKMGDMGRAKELFVKMPEKNVVSWTTMVNGFSQNGDPEKALETFFCMLE 300
Query: 322 SGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVE 381
G P+D T+V LSAC+ G + G I + + +VD+ + G +E
Sbjct: 301 EGARPNDYTIVSALSACAKIGALDAGLRIHNYLSGNGF-KLNLVIGTALVDMYAKCGNIE 359
Query: 382 DAMKLIEAMPFEPDAIIWGSLL--GACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNI 439
A K+ E +IW ++ A H + L K +P + ++ + N
Sbjct: 360 HAEKVFHETK-EKGLLIWSVMIWGWAIHGHFRKALQYFEWMKFTGTKPDSV-VFLAVLNA 417
Query: 440 YASQGRFHDVAELRKNMRKRNVIKP 464
+ G+ ++ + NMR+ +I+P
Sbjct: 418 CSHSGQVNEGLKFFDNMRRGYLIEP 442
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 101/225 (44%), Gaps = 19/225 (8%)
Query: 247 RQVHAQLVRCQFDVDVYVASVLITMYI-KCGELVK---GKLIFDNFASKDIVMWNSIISG 302
RQ+H QL RC +V+ +S ++T +I C L IF F K+ ++N++I G
Sbjct: 59 RQIHGQLYRC----NVFSSSRVVTQFISSCSSLNSVDYAISIFQRFELKNSYLFNALIRG 114
Query: 303 YAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEP 362
A+ E S+ F M + PD +T VL + + GR + + K+ +E
Sbjct: 115 LAENSRFESSISFFVLMLKWKISPDRLTFPFVLKSAAALSNGGVGRALHCGIL-KFGLEF 173
Query: 363 KTEHYACMVDLLGRAGQVEDAMKLIEAMP---FEPDAIIWGSLL-GACRTHMKLDLAEVA 418
+ +VD+ + ++ A+K+ + P +IW L+ G CR DL V
Sbjct: 174 DSFVRVSLVDMYVKVEELGSALKVFDESPESVKNGSVLIWNVLIHGYCRMG---DL--VK 228
Query: 419 AKKLLQLEP-KNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVI 462
A +L P K+ G + L N + G EL M ++NV+
Sbjct: 229 ATELFDSMPKKDTGSWNSLINGFMKMGDMGRAKELFVKMPEKNVV 273
>gi|224069617|ref|XP_002303012.1| predicted protein [Populus trichocarpa]
gi|222844738|gb|EEE82285.1| predicted protein [Populus trichocarpa]
Length = 815
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 233/716 (32%), Positives = 366/716 (51%), Gaps = 120/716 (16%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQM----PEKNVVSWTVMLGG------------ 46
ER VV+WT M+ Y + +A LF +M + + V++ +L G
Sbjct: 102 ERTVVAWTTMIGAYSKSNRFGDAFKLFAEMHRSGSQPDYVTYITLLTGCNDLEVAKELYQ 161
Query: 47 -----------------------FIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGR 83
+ + +D ARRLF M D V+ M+ GY +G
Sbjct: 162 AHAQIVKLGHHLNHRVCNTLLDSYFKTGGLDSARRLFLEMCGWDSVSFNVMITGYANNGL 221
Query: 84 VDEGREIFDEMPK---------------------------------------KNVISWTT 104
+E E+F EM +NV
Sbjct: 222 NEEAIELFVEMQNLGFKPSDFTFAAVISASVGLDDTAFGQQIHGFVVKTSFIRNVFVGNA 281
Query: 105 MISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAM-------- 156
+ Y ++ ++ RKLF MPE + VS+ ++ Y G+++++ +LF+ +
Sbjct: 282 FLDFYSKHDCVNEVRKLFNEMPELDGVSYNVIITAYAWVGKVKESIDLFQELQFTTFDRK 341
Query: 157 ----PMKSVVASNSMILGLGQN---------------------------GEVQKARVVFD 185
P +A++S+ L +G+ G+ ++A +F
Sbjct: 342 NFPFPTMLSIAASSLDLQMGRQLHAQVVVSMADPDFRVSNSLVDMYAKCGKFEEADRIFL 401
Query: 186 QMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDH 245
++ + W+ MI ++G + LF M++ V + + VL A+LAS+
Sbjct: 402 RLSSRSTVPWTAMISANVQRGLHENGLKLFYEMRRANVSADQATFACVLKASANLASILL 461
Query: 246 GRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQ 305
G+Q+H+ ++R F ++VY L+ MY C + F+ + +++V WN+++S YAQ
Sbjct: 462 GKQLHSCVIRSGF-MNVYSGCALLDMYANCASIKDAIKTFEEMSERNVVTWNALLSAYAQ 520
Query: 306 YGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTE 365
G G+ +LK F EM SG PD V+ + +L+ACS+ V+EG + F M Y + PK E
Sbjct: 521 NGDGKGTLKSFEEMIMSGYQPDSVSFLCILTACSHCRLVEEGLKYFNDMSGVYNLAPKRE 580
Query: 366 HYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQL 425
HY MVD L R+G+ ++A KL+ MPFEPD I+W S+L +CR H LA AA +L +
Sbjct: 581 HYTAMVDALCRSGRFDEAEKLMGQMPFEPDEIVWTSVLNSCRIHKNYALARKAAGQLFNM 640
Query: 426 EP-KNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDC 484
+ ++A PY+ +SNI+A G++ V +++K MR R V K P SW+E++ KVH+F+ D
Sbjct: 641 KVLRDAAPYVTMSNIFAEAGQWDSVVKVKKAMRDRGVRKLPAYSWVEIKHKVHVFSAND- 699
Query: 485 VSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVK 544
HP+ I+R +E + + + GY PD S +VD+E K+ SL+YHSE+LA+A+ L+
Sbjct: 700 DKHPQQLEILRKIEMLAEQMEKEGYDPDISCAHQNVDKESKIDSLKYHSERLAIAFALIN 759
Query: 545 LPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
PEG PI VMKNLR C DCH+AIK+ISK++GREI +RD+NRFHHF+DG CSC DYW
Sbjct: 760 TPEGSPILVMKNLRACTDCHAAIKVISKIVGREITVRDSNRFHHFRDGSCSCGDYW 815
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 130/458 (28%), Positives = 210/458 (45%), Gaps = 62/458 (13%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MP RN S ++ GYV+ G +T A +F E+ VV+WT M+G + + +R DA +LF
Sbjct: 69 MPNRNSFSIDIIISGYVKSGNLTVARRIFDDTDERTVVAWTTMIGAYSKSNRFGDAFKLF 128
Query: 61 DMM----PEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPK-------KNVISWTTMISGY 109
M + D V ++ G C D V +E++ + N T++ Y
Sbjct: 129 AEMHRSGSQPDYVTYITLLTG-CNDLEV--AKELYQAHAQIVKLGHHLNHRVCNTLLDSY 185
Query: 110 VNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMP------------ 157
+D AR+LF M + VS+ M+ GY G ++A ELF M
Sbjct: 186 FKTGGLDSARRLFLEMCGWDSVSFNVMITGYANNGLNEEAIELFVEMQNLGFKPSDFTFA 245
Query: 158 ---------------------------MKSVVASNSMILGLGQNGEVQKARVVFDQMREK 190
+++V N+ + ++ V + R +F++M E
Sbjct: 246 AVISASVGLDDTAFGQQIHGFVVKTSFIRNVFVGNAFLDFYSKHDCVNEVRKLFNEMPEL 305
Query: 191 DDATWSGMIKVYERKGYELEVIDLFTLMQKEGV-RVNFPSLISVLSVCASLASLDHGRQV 249
D +++ +I Y G E IDLF +Q R NFP ++LS+ AS L GRQ+
Sbjct: 306 DGVSYNVIITAYAWVGKVKESIDLFQELQFTTFDRKNFP-FPTMLSIAASSLDLQMGRQL 364
Query: 250 HAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLG 309
HAQ+V D D V++ L+ MY KCG+ + IF +S+ V W ++IS Q GL
Sbjct: 365 HAQVVVSMADPDFRVSNSLVDMYAKCGKFEEADRIFLRLSSRSTVPWTAMISANVQRGLH 424
Query: 310 EKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFES-MKSKYLVEPKTEHYA 368
E LK+F+EM + V D T VL A + + G+++ ++S ++ +
Sbjct: 425 ENGLKLFYEMRRANVSADQATFACVLKASANLASILLGKQLHSCVIRSGFM----NVYSG 480
Query: 369 C-MVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
C ++D+ ++DA+K E M E + + W +LL A
Sbjct: 481 CALLDMYANCASIKDAIKTFEEMS-ERNVVTWNALLSA 517
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 89/361 (24%), Positives = 173/361 (47%), Gaps = 16/361 (4%)
Query: 56 ARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRI 115
AR+L D MP ++ + ++ GY + G + R IFD+ ++ V++WTTMI Y +NR
Sbjct: 62 ARQLLDQMPNRNSFSIDIIISGYVKSGNLTVARRIFDDTDERTVVAWTTMIGAYSKSNRF 121
Query: 116 DVARKLFEVM----PEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVAS------- 164
A KLF M + + V++ +L G C ++ A EL++A +
Sbjct: 122 GDAFKLFAEMHRSGSQPDYVTYITLLTG---CNDLEVAKELYQAHAQIVKLGHHLNHRVC 178
Query: 165 NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVR 224
N+++ + G + AR +F +M D +++ MI Y G E I+LF MQ G +
Sbjct: 179 NTLLDSYFKTGGLDSARRLFLEMCGWDSVSFNVMITGYANNGLNEEAIELFVEMQNLGFK 238
Query: 225 VNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLI 284
+ + +V+S L G+Q+H +V+ F +V+V + + Y K + + + +
Sbjct: 239 PSDFTFAAVISASVGLDDTAFGQQIHGFVVKTSFIRNVFVGNAFLDFYSKHDCVNEVRKL 298
Query: 285 FDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKV 344
F+ D V +N II+ YA G ++S+ +F E+ + + +LS + + +
Sbjct: 299 FNEMPELDGVSYNVIITAYAWVGKVKESIDLFQELQFTTFDRKNFPFPTMLSIAASSLDL 358
Query: 345 KEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLG 404
+ GR++ + + +P +VD+ + G+ E+A ++ + + W +++
Sbjct: 359 QMGRQLHAQVVVS-MADPDFRVSNSLVDMYAKCGKFEEADRIFLRLS-SRSTVPWTAMIS 416
Query: 405 A 405
A
Sbjct: 417 A 417
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 126/270 (46%), Gaps = 2/270 (0%)
Query: 136 MLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATW 195
M+ ++ G++ A +L MP ++ + + +I G ++G + AR +FD E+ W
Sbjct: 49 MIKDLSERGQLCQARQLLDQMPNRNSFSIDIIISGYVKSGNLTVARRIFDDTDERTVVAW 108
Query: 196 SGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVR 255
+ MI Y + + LF M + G + ++ + I++L+ C L Q HAQ+V+
Sbjct: 109 TTMIGAYSKSNRFGDAFKLFAEMHRSGSQPDYVTYITLLTGCNDLEVAKELYQAHAQIVK 168
Query: 256 CQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKV 315
++ V + L+ Y K G L + +F D V +N +I+GYA GL E+++++
Sbjct: 169 LGHHLNHRVCNTLLDSYFKTGGLDSARRLFLEMCGWDSVSFNVMITGYANNGLNEEAIEL 228
Query: 316 FHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLG 375
F EM + G P D T V+SA G++I + + A +D
Sbjct: 229 FVEMQNLGFKPSDFTFAAVISASVGLDDTAFGQQIHGFVVKTSFIRNVFVGNA-FLDFYS 287
Query: 376 RAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
+ V + KL MP E D + + ++ A
Sbjct: 288 KHDCVNEVRKLFNEMP-ELDGVSYNVIITA 316
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 84/179 (46%), Gaps = 22/179 (12%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTL--FWQM----PEKNVVSWTVMLGGFIRDSRID 54
M ERNVV+W A++ Y + G GTL F +M + + VS+ +L ++
Sbjct: 503 MSERNVVTWNALLSAYAQNG--DGKGTLKSFEEMIMSGYQPDSVSFLCILTACSHCRLVE 560
Query: 55 DARRLFDMM-------PEKDVVAQTNMVLGYCQDGRVDEGREIFDEMP-KKNVISWTTMI 106
+ + F+ M P+++ T MV C+ GR DE ++ +MP + + I WT+++
Sbjct: 561 EGLKYFNDMSGVYNLAPKRE--HYTAMVDALCRSGRFDEAEKLMGQMPFEPDEIVWTSVL 618
Query: 107 SGYVNNNRIDVARK----LFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSV 161
+ + +ARK LF + ++ + M + + G+ ++ KAM + V
Sbjct: 619 NSCRIHKNYALARKAAGQLFNMKVLRDAAPYVTMSNIFAEAGQWDSVVKVKKAMRDRGV 677
>gi|356529924|ref|XP_003533536.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Glycine max]
Length = 694
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 224/623 (35%), Positives = 356/623 (57%), Gaps = 27/623 (4%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPE-----KNVVSWTVMLGGFIRDSRIDD 55
MP RNVVSW ++ GY+ G E LF M N +T L R+ +
Sbjct: 76 MPLRNVVSWNVLMAGYLHGGNHLEVLVLFKNMVSLQNACPNEYVFTTALSACSHGGRVKE 135
Query: 56 ARRLFDMMPEKDVVA----QTNMVLGYCQDGRVDEGREIFDEMPKKNV---ISWTTMISG 108
+ ++ + +V ++ +V Y + V+ ++ D +P ++V S+ ++++
Sbjct: 136 GMQCHGLLFKFGLVCHQYVKSALVHMYSRCSHVELALQVLDTVPGEHVNDIFSYNSVLNA 195
Query: 109 YVNNNR----IDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAW-------ELFKAMP 157
V + R ++V R++ + + V++ +MG C +I+D L +
Sbjct: 196 LVESGRGEEAVEVLRRMVDECVAWDHVTYVG-VMGL--CAQIRDLQLGLRVHARLLRGGL 252
Query: 158 MKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTL 217
M + +I G+ GEV AR VFD ++ ++ W+ ++ Y + GY E ++LFT
Sbjct: 253 MFDEFVGSMLIDMYGKCGEVLNARNVFDGLQNRNVVVWTALMTAYLQNGYFEESLNLFTC 312
Query: 218 MQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGE 277
M +EG N + +L+ CA +A+L HG +HA++ + F V V + LI MY K G
Sbjct: 313 MDREGTLPNEYTFAVLLNACAGIAALRHGDLLHARVEKLGFKNHVIVRNALINMYSKSGS 372
Query: 278 LVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSA 337
+ +F + +DI+ WN++I GY+ +GLG+++L+VF +M S+ P+ VT +GVLSA
Sbjct: 373 IDSSYNVFTDMIYRDIITWNAMICGYSHHGLGKQALQVFQDMVSAEECPNYVTFIGVLSA 432
Query: 338 CSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAI 397
S+ G VKEG + + +EP EHY CMV LL RAG +++A ++ + D +
Sbjct: 433 YSHLGLVKEGFYYLNHLMRNFKIEPGLEHYTCMVALLSRAGLLDEAENFMKTTQVKWDVV 492
Query: 398 IWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMR 457
W +LL AC H DL A+ +LQ++P + G Y LLSN+YA R+ V +RK MR
Sbjct: 493 AWRTLLNACHVHRNYDLGRRIAESVLQMDPHDVGTYTLLSNMYAKARRWDGVVTIRKLMR 552
Query: 458 KRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVL 517
+RN+ K PG SW+++ +H+F +HPE I + ++++ L++ GY P+ + VL
Sbjct: 553 ERNIKKEPGASWLDIRNDIHVFLSEGS-NHPESIQIYKKVQQLLALIKPLGYVPNIASVL 611
Query: 518 HDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGRE 577
HDV++E+K L YHSEKLA+AYGL+K+P PIR++KNLR+C DCH+A+KLISKV R
Sbjct: 612 HDVEDEQKEGYLSYHSEKLALAYGLMKIPSPAPIRIIKNLRMCDDCHTAVKLISKVTNRL 671
Query: 578 IILRDANRFHHFKDGLCSCRDYW 600
II+RDANRFHHF+DG C+C D+W
Sbjct: 672 IIVRDANRFHHFRDGSCTCLDHW 694
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 85/351 (24%), Positives = 175/351 (49%), Gaps = 16/351 (4%)
Query: 72 TNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVN-NNRIDVARKLFEVMPE--- 127
++V Y + G++ R +FD MP +NV+SW +++GY++ N ++V LF+ M
Sbjct: 54 NSLVHLYVKCGQLGLARNLFDAMPLRNVVSWNVLMAGYLHGGNHLEVL-VLFKNMVSLQN 112
Query: 128 --KNEVSWTAMLMGYTQCGRIQDAWE----LFKAMPMKSVVASNSMILGLGQNGEVQKAR 181
NE +T L + GR+++ + LFK + ++++ + V+ A
Sbjct: 113 ACPNEYVFTTALSACSHGGRVKEGMQCHGLLFKFGLVCHQYVKSALVHMYSRCSHVELAL 172
Query: 182 VVFDQM---REKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCA 238
V D + D +++ ++ G E +++ M E V + + + V+ +CA
Sbjct: 173 QVLDTVPGEHVNDIFSYNSVLNALVESGRGEEAVEVLRRMVDECVAWDHVTYVGVMGLCA 232
Query: 239 SLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNS 298
+ L G +VHA+L+R D +V S+LI MY KCGE++ + +FD ++++V+W +
Sbjct: 233 QIRDLQLGLRVHARLLRGGLMFDEFVGSMLIDMYGKCGEVLNARNVFDGLQNRNVVVWTA 292
Query: 299 IISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKY 358
+++ Y Q G E+SL +F M G +P++ T +L+AC+ ++ G ++ + K
Sbjct: 293 LMTAYLQNGYFEESLNLFTCMDREGTLPNEYTFAVLLNACAGIAALRHG-DLLHARVEKL 351
Query: 359 LVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTH 409
+ ++++ ++G ++ + + M + D I W +++ H
Sbjct: 352 GFKNHVIVRNALINMYSKSGSIDSSYNVFTDMIYR-DIITWNAMICGYSHH 401
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 92/175 (52%), Gaps = 7/175 (4%)
Query: 237 CASLASLDHGRQVHAQ-LVRCQFDVDVYVASV--LITMYIKCGELVKGKLIFDNFASKDI 293
CA + L G+ +HAQ L+R Q +++ + L+ +Y+KCG+L + +FD +++
Sbjct: 22 CADVKWLPFGKAMHAQFLIRNQTSNHSHISHLNSLVHLYVKCGQLGLARNLFDAMPLRNV 81
Query: 294 VMWNSIISGYAQYGLGEKSLKVFHEMFS-SGVMPDDVTLVGVLSACSYTGKVKEGREIFE 352
V WN +++GY G + L +F M S P++ LSACS+ G+VKEG +
Sbjct: 82 VSWNVLMAGYLHGGNHLEVLVLFKNMVSLQNACPNEYVFTTALSACSHGGRVKEGMQC-H 140
Query: 353 SMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFE--PDAIIWGSLLGA 405
+ K+ + + +V + R VE A+++++ +P E D + S+L A
Sbjct: 141 GLLFKFGLVCHQYVKSALVHMYSRCSHVELALQVLDTVPGEHVNDIFSYNSVLNA 195
>gi|30693150|ref|NP_190486.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75222188|sp|Q5G1T1.1|PP272_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g49170, chloroplastic; AltName: Full=Protein EMBRYO
DEFECTIVE 2261; Flags: Precursor
gi|58013018|gb|AAW62962.1| embryo-defective 2261 [Arabidopsis thaliana]
gi|58013020|gb|AAW62963.1| embryo-defective 2261 [Arabidopsis thaliana]
gi|332644986|gb|AEE78507.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 850
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 227/626 (36%), Positives = 355/626 (56%), Gaps = 30/626 (4%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMP----EKNVVSWTVMLGGFIRDSRIDDA 56
M E NVV+WT M+ ++ G EA F M E + + + + +
Sbjct: 229 MSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLG 288
Query: 57 RRLFDMMPEKDVV--AQTNMVLGYCQ---DGRVDEGREIFDEMPKKNVISWTTMISGYVN 111
++L +V + ++V Y + DG VD+ R++FD M +V+SWT +I+GY+
Sbjct: 289 KQLHSWAIRSGLVDDVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMK 348
Query: 112 N-NRIDVARKLFEVM-----PEKNEVSWTAMLMGYTQCGRIQDA-------WELFKAMPM 158
N N A LF M E N ++++ + CG + D + FK
Sbjct: 349 NCNLATEAINLFSEMITQGHVEPNHFTFSS---AFKACGNLSDPRVGKQVLGQAFKRGLA 405
Query: 159 KSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLM 218
+ +NS+I ++ ++ A+ F+ + EK+ +++ + R + L + +
Sbjct: 406 SNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEI 465
Query: 219 QKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGEL 278
+ + V+ + S+LS A++ S+ G Q+H+Q+V+ + V + LI+MY KCG +
Sbjct: 466 TERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSI 525
Query: 279 VKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSAC 338
+F+ +++++ W S+I+G+A++G + L+ F++M GV P++VT V +LSAC
Sbjct: 526 DTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSAC 585
Query: 339 SYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAII 398
S+ G V EG F SM + ++PK EHYACMVDLL RAG + DA + I MPF+ D ++
Sbjct: 586 SHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLV 645
Query: 399 WGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRK 458
W + LGACR H +L ++AA+K+L+L+P YI LSNIYA G++ + E+R+ M++
Sbjct: 646 WRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKE 705
Query: 459 RNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLH 518
RN++K GCSWIEV K+H F D +HP I L+++ ++ GY PD+ VLH
Sbjct: 706 RNLVKEGGCSWIEVGDKIHKFYVGD-TAHPNAHQIYDELDRLITEIKRCGYVPDTDLVLH 764
Query: 519 DVDEEEKVHS----LRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVM 574
++EE L HSEK+AVA+GL+ + P+RV KNLRVCGDCH+A+K IS V
Sbjct: 765 KLEEENDEAEKERLLYQHSEKIAVAFGLISTSKSRPVRVFKNLRVCGDCHNAMKYISTVS 824
Query: 575 GREIILRDANRFHHFKDGLCSCRDYW 600
GREI+LRD NRFHHFKDG CSC DYW
Sbjct: 825 GREIVLRDLNRFHHFKDGKCSCNDYW 850
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 95/371 (25%), Positives = 174/371 (46%), Gaps = 25/371 (6%)
Query: 58 RLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEM---PKKNVISWTTMISGYVNNNR 114
RL + E D V +++ Y + G + ++F+ M K++V+SW+ M++ Y NN R
Sbjct: 87 RLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGR 146
Query: 115 ----IDVARKLFEVMPEKNEVSWTAMLMG-----YTQCGRIQDAWELFKAMPMKSVVASN 165
I V + E+ N+ +TA++ + GR+ + L K +S V
Sbjct: 147 ELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGF-LMKTGHFESDVCVG 205
Query: 166 SMILGLGQNGE--VQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGV 223
++ + GE + A VFD+M E + TW+ MI + G+ E I F M G
Sbjct: 206 CSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGF 265
Query: 224 RVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKC---GELVK 280
+ +L SV S CA L +L G+Q+H+ +R DV + L+ MY KC G +
Sbjct: 266 ESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVECS--LVDMYAKCSADGSVDD 323
Query: 281 GKLIFDNFASKDIVMWNSIISGYAQY-GLGEKSLKVFHEMFSSG-VMPDDVTLVGVLSAC 338
+ +FD ++ W ++I+GY + L +++ +F EM + G V P+ T AC
Sbjct: 324 CRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKAC 383
Query: 339 SYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAII 398
+ G+++ + L + + ++ + ++ ++EDA + E++ E + +
Sbjct: 384 GNLSDPRVGKQVLGQAFKRGLASNSSVANS-VISMFVKSDRMEDAQRAFESLS-EKNLVS 441
Query: 399 WGSLL-GACRT 408
+ + L G CR
Sbjct: 442 YNTFLDGTCRN 452
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 89/431 (20%), Positives = 184/431 (42%), Gaps = 29/431 (6%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDD----ARR 58
+R+VVSW+AM+ Y G +A +F + E +V IR D R
Sbjct: 128 KRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRV 187
Query: 59 LFDMMP-----EKDVVAQTNMVLGYCQ-DGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+ E DV +++ + + + + ++FD+M + NV++WT MI+ +
Sbjct: 188 TLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQM 247
Query: 113 NRIDVARKLFEVMP----EKNEVSWTAMLMGYTQCGRIQD--------AWELFKAMPMKS 160
A + F M E ++ + +++ ++ C +++ +W + +
Sbjct: 248 GFPREAIRFFLDMVLSGFESDKFTLSSV---FSACAELENLSLGKQLHSWAIRSGLVDDV 304
Query: 161 VVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERK-GYELEVIDLFTLMQ 219
+ M +G V R VFD+M + +W+ +I Y + E I+LF+ M
Sbjct: 305 ECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMI 364
Query: 220 KEG-VRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGEL 278
+G V N + S C +L+ G+QV Q + + VA+ +I+M++K +
Sbjct: 365 TQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRM 424
Query: 279 VKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSAC 338
+ F++ + K++V +N+ + G + E++ K+ E+ + T +LS
Sbjct: 425 EDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGV 484
Query: 339 SYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAII 398
+ G +++G +I S K + ++ + + G ++ A ++ M + I
Sbjct: 485 ANVGSIRKGEQI-HSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFME-NRNVIS 542
Query: 399 WGSLLGACRTH 409
W S++ H
Sbjct: 543 WTSMITGFAKH 553
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 95/200 (47%), Gaps = 6/200 (3%)
Query: 212 IDLFTLMQKEGVR-VNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLIT 270
+ LM ++G+R ++ + S+L C G+ VHA+L+ + D + + LI+
Sbjct: 46 VSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLIS 105
Query: 271 MYIKCGELVKGKLIFDN---FASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPD 327
+Y K G+ K + +F+ F +D+V W+++++ Y G ++KVF E G++P+
Sbjct: 106 LYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPN 165
Query: 328 DVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRA-GQVEDAMKL 386
D V+ ACS + V GR + E ++D+ + E+A K+
Sbjct: 166 DYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKV 225
Query: 387 IEAMPFEPDAIIWGSLLGAC 406
+ M E + + W ++ C
Sbjct: 226 FDKMS-ELNVVTWTLMITRC 244
>gi|79329389|ref|NP_001031987.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171830|sp|Q9FND7.1|PP410_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g40405
gi|10178152|dbj|BAB11597.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332007161|gb|AED94544.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 612
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 204/467 (43%), Positives = 299/467 (64%), Gaps = 1/467 (0%)
Query: 134 TAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDA 193
T ++ Y + G + ++F ++P V +M+ + G+V AR +F+ M E+D
Sbjct: 147 TGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFARKLFEGMPERDPI 206
Query: 194 TWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQL 253
W+ MI Y + G E +++F LMQ EGV+VN ++ISVLS C L +LD GR H+ +
Sbjct: 207 AWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQGRWAHSYI 266
Query: 254 VRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSL 313
R + + V +A+ L+ +Y KCG++ K +F K++ W+S ++G A G GEK L
Sbjct: 267 ERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCL 326
Query: 314 KVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDL 373
++F M GV P+ VT V VL CS G V EG+ F+SM++++ +EP+ EHY C+VDL
Sbjct: 327 ELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDL 386
Query: 374 LGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPY 433
RAG++EDA+ +I+ MP +P A +W SLL A R + L+L +A+KK+L+LE N G Y
Sbjct: 387 YARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRMYKNLELGVLASKKMLELETANHGAY 446
Query: 434 ILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMI 493
+LLSNIYA + +V+ +R++M+ + V K PGCS +EV +VH F D SHP++ I
Sbjct: 447 VLLSNIYADSNDWDNVSHVRQSMKSKGVRKQPGCSVMEVNGEVHEFFVGD-KSHPKYTQI 505
Query: 494 MRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRV 553
+ + I LR AGY D++ V+ D+DEEEK +L HSEK A+A+G++ L E VPIR+
Sbjct: 506 DAVWKDISRRLRLAGYKADTTPVMFDIDEEEKEDALCLHSEKAAIAFGIMSLKEDVPIRI 565
Query: 554 MKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
+KNLRVCGDCH +ISK+ REII+RD NRFHHFKDG CSC +W
Sbjct: 566 VKNLRVCGDCHQVSMMISKIFNREIIVRDRNRFHHFKDGHCSCNGFW 612
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 132/292 (45%), Gaps = 47/292 (16%)
Query: 57 RRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRID 116
RR FD P QT ++ Y + G +D ++F+ +P + + T M++ +
Sbjct: 136 RRGFDNDPH----VQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVV 191
Query: 117 VARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAM----------PMKSVVASNS 166
ARKLFE MPE++ ++W AM+ GY Q G ++A +F M M SV+++ +
Sbjct: 192 FARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACT 251
Query: 167 MILGLGQN-----------------------------GEVQKARVVFDQMREKDDATWSG 197
+ L Q G+++KA VF M EK+ TWS
Sbjct: 252 QLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSS 311
Query: 198 MIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQ 257
+ G+ + ++LF+LM+++GV N + +SVL C+ + +D G Q H +R +
Sbjct: 312 ALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEG-QRHFDSMRNE 370
Query: 258 FDVDVYVA--SVLITMYIKCGELVKGKLIFDNFASK-DIVMWNSIISGYAQY 306
F ++ + L+ +Y + G L I K +W+S++ Y
Sbjct: 371 FGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRMY 422
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 70/164 (42%), Gaps = 30/164 (18%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDV- 68
T +V Y + G + +A +FW M EKNV +W+ L G + + LF +M + V
Sbjct: 279 TTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVT 338
Query: 69 ---VAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVM 125
V +++ G G VDEG+ FD M R F +
Sbjct: 339 PNAVTFVSVLRGCSVVGFVDEGQRHFDSM------------------------RNEFGIE 374
Query: 126 PEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMIL 169
P+ + ++ Y + GR++DA + + MPMK A S +L
Sbjct: 375 PQLEH--YGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLL 416
>gi|297737063|emb|CBI26264.3| unnamed protein product [Vitis vinifera]
Length = 583
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 218/540 (40%), Positives = 317/540 (58%), Gaps = 13/540 (2%)
Query: 72 TNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMP----E 127
++V Y + R + + + P ++V++WT +I+G V N R A F M +
Sbjct: 46 NHLVNMYSKLDRPNSAQLLLSLTPNRSVVTWTALIAGSVQNGRFTSALFHFSNMRRDSIQ 105
Query: 128 KNEVSWTAMLMGYTQ-----CGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARV 182
N+ ++ G+ A + KA + V S + G ++AR
Sbjct: 106 PNDFTFPCAFKASGSLRSPLVGKQVHALAV-KAGQISDVFVGCSAFDMYSKAGLTEEARK 164
Query: 183 VFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLAS 242
+FD+M E++ ATW+ + +G + + F +KEG+ + SVLS CA L+
Sbjct: 165 MFDEMPERNIATWNAYLSNSVLEGRYDDALTAFIEARKEGIEPTDFMVSSVLSACAGLSV 224
Query: 243 LDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISG 302
L+ G+ VH V+ +++V S L+ MY KCG + + FD +++V WN++I G
Sbjct: 225 LEVGKSVHTLAVKACVVGNIFVGSALVDMYGKCGSIEDAERAFDEMPERNLVTWNAMIGG 284
Query: 303 YAQYGLGEKSLKVFHEMF--SSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLV 360
YA G + ++ +F EM S V P+ VT V VLSACS G V G EIFESM+ +Y +
Sbjct: 285 YAHQGQADMAVTLFDEMTCGSHRVAPNYVTFVCVLSACSRAGSVNVGMEIFESMRGRYGI 344
Query: 361 EPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAK 420
EP EHYAC+VDLLGRAG VE A + I+ MP P +WG+LLGA + K +L +VAA
Sbjct: 345 EPGAEHYACVVDLLGRAGMVEQAYQFIKKMPIRPTVSVWGALLGASKMFGKSELGKVAAD 404
Query: 421 KLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFT 480
L +L+P ++G ++LLSN++A+ GR+ + +RK M+ + K GCSWI VH+F
Sbjct: 405 NLFELDPLDSGNHVLLSNMFAAAGRWEEATLVRKEMKDVGIKKGAGCSWITAGNAVHVFQ 464
Query: 481 GRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAY 540
+D SH + I ML K+ G + AGY PD+SF L D++EEEK + YHSEK+A+A+
Sbjct: 465 AKD-TSHERNSEIQAMLAKLRGEMEAAGYIPDTSFALFDLEEEEKAMEVWYHSEKIALAF 523
Query: 541 GLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
GL+ +P GVPIR+ KNLR+CGDCHSAIK IS ++GREII+RD N FH F+D CSCRDYW
Sbjct: 524 GLISIPAGVPIRITKNLRICGDCHSAIKFISGIVGREIIVRDNNLFHRFRDNQCSCRDYW 583
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 117/267 (43%), Gaps = 20/267 (7%)
Query: 2 PERNVVSWTAMVRGYVEEGMITEAGTLFWQM------PEKNVVSWTVMLGGFIRDSRIDD 55
P R+VV+WTA++ G V+ G T A F M P G +R +
Sbjct: 69 PNRSVVTWTALIAGSVQNGRFTSALFHFSNMRRDSIQPNDFTFPCAFKASGSLRSPLVGK 128
Query: 56 ARRLFDMMPEK--DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNN 113
+ + DV + Y + G +E R++FDEMP++N+ +W +S V
Sbjct: 129 QVHALAVKAGQISDVFVGCSAFDMYSKAGLTEEARKMFDEMPERNIATWNAYLSNSVLEG 188
Query: 114 RIDVARKLFEVMPEKNEVSWTAMLMG--YTQCG--RIQDAWELFKAMPMKSVVASN---- 165
R D A F + K + T ++ + C + + + + +K+ V N
Sbjct: 189 RYDDALTAF-IEARKEGIEPTDFMVSSVLSACAGLSVLEVGKSVHTLAVKACVVGNIFVG 247
Query: 166 -SMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVR 224
+++ G+ G ++ A FD+M E++ TW+ MI Y +G + LF M R
Sbjct: 248 SALVDMYGKCGSIEDAERAFDEMPERNLVTWNAMIGGYAHQGQADMAVTLFDEMTCGSHR 307
Query: 225 V--NFPSLISVLSVCASLASLDHGRQV 249
V N+ + + VLS C+ S++ G ++
Sbjct: 308 VAPNYVTFVCVLSACSRAGSVNVGMEI 334
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 99/244 (40%), Gaps = 55/244 (22%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQ----------------------------- 31
MPERN+ +W A + V EG +A T F +
Sbjct: 169 MPERNIATWNAYLSNSVLEGRYDDALTAFIEARKEGIEPTDFMVSSVLSACAGLSVLEVG 228
Query: 32 -----MPEKNVVSWTVMLGGFIRD-----SRIDDARRLFDMMPEKDVVAQTNMVLGYCQD 81
+ K V + +G + D I+DA R FD MPE+++V M+ GY
Sbjct: 229 KSVHTLAVKACVVGNIFVGSALVDMYGKCGSIEDAERAFDEMPERNLVTWNAMIGGYAHQ 288
Query: 82 GRVDEGREIFDEMP------KKNVISWTTMISGYVNNNRIDVARKLFEVM-------PEK 128
G+ D +FDEM N +++ ++S ++V ++FE M P
Sbjct: 289 GQADMAVTLFDEMTCGSHRVAPNYVTFVCVLSACSRAGSVNVGMEIFESMRGRYGIEPGA 348
Query: 129 NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQN-GEVQKARVVFDQM 187
+ L+G + G ++ A++ K MP++ V+ +LG + G+ + +V D +
Sbjct: 349 EHYACVVDLLG--RAGMVEQAYQFIKKMPIRPTVSVWGALLGASKMFGKSELGKVAADNL 406
Query: 188 REKD 191
E D
Sbjct: 407 FELD 410
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 79/186 (42%), Gaps = 45/186 (24%)
Query: 16 YVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF-----------DMMP 64
Y + G+ EA +F +MPE+N+ +W L + + R DDA F D M
Sbjct: 153 YSKAGLTEEARKMFDEMPERNIATWNAYLSNSVLEGRYDDALTAFIEARKEGIEPTDFMV 212
Query: 65 EK----------------------------DVVAQTNMVLGYCQDGRVDEGREIFDEMPK 96
++ + +V Y + G +++ FDEMP+
Sbjct: 213 SSVLSACAGLSVLEVGKSVHTLAVKACVVGNIFVGSALVDMYGKCGSIEDAERAFDEMPE 272
Query: 97 KNVISWTTMISGYVNNNRIDVARKLFEVMP------EKNEVSWTAMLMGYTQCGRIQDAW 150
+N+++W MI GY + + D+A LF+ M N V++ +L ++ G +
Sbjct: 273 RNLVTWNAMIGGYAHQGQADMAVTLFDEMTCGSHRVAPNYVTFVCVLSACSRAGSVNVGM 332
Query: 151 ELFKAM 156
E+F++M
Sbjct: 333 EIFESM 338
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 78/177 (44%), Gaps = 5/177 (2%)
Query: 229 SLISVLSVCASLASLDHGRQVHAQLVRCQFD-VDVYVASVLITMYIKCGELVKGKLIFDN 287
SL S++ S GR HAQ+++ + + ++ + L+ MY K +L+
Sbjct: 8 SLASLVESAVSTQCSRLGRAAHAQIIKTLDNPLPSFIYNHLVNMYSKLDRPNSAQLLLSL 67
Query: 288 FASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEG 347
++ +V W ++I+G Q G +L F M + P+D T A G
Sbjct: 68 TPNRSVVTWTALIAGSVQNGRFTSALFHFSNMRRDSIQPNDFTFPCAFKASGSLRSPLVG 127
Query: 348 REIFE-SMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
+++ ++K+ + + A D+ +AG E+A K+ + MP E + W + L
Sbjct: 128 KQVHALAVKAGQISDVFVGCSA--FDMYSKAGLTEEARKMFDEMP-ERNIATWNAYL 181
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 78/176 (44%), Gaps = 25/176 (14%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMP------EKNVVSWTVMLGGFIRDSRID 54
MPERN+V+W AM+ GY +G A TLF +M N V++ +L R ++
Sbjct: 270 MPERNLVTWNAMIGGYAHQGQADMAVTLFDEMTCGSHRVAPNYVTFVCVLSACSRAGSVN 329
Query: 55 DARRLFDMM-------PEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVIS-WTTMI 106
+F+ M P + A +LG + G V++ + +MP + +S W ++
Sbjct: 330 VGMEIFESMRGRYGIEPGAEHYACVVDLLG--RAGMVEQAYQFIKKMPIRPTVSVWGALL 387
Query: 107 SGYVNNNRIDV----ARKLFEVMP--EKNEVSWTAMLMGYTQCGRIQDAWELFKAM 156
+ ++ A LFE+ P N V + M + GR ++A + K M
Sbjct: 388 GASKMFGKSELGKVAADNLFELDPLDSGNHVLLSNM---FAAAGRWEEATLVRKEM 440
>gi|224131508|ref|XP_002328557.1| predicted protein [Populus trichocarpa]
gi|222838272|gb|EEE76637.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 206/499 (41%), Positives = 313/499 (62%), Gaps = 1/499 (0%)
Query: 103 TTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVV 162
TT+IS Y + ARK+F+ MPE N ++W AM+ + G ++ ELF MP+++++
Sbjct: 145 TTLISMYGECGFVGFARKVFDEMPEPNAIAWNAMVTACCRGGDMKGGRELFDLMPVRNLM 204
Query: 163 ASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEG 222
+ N M+ G + GE++ AR +F +M KDD +WS MI + GY E F +Q++G
Sbjct: 205 SWNVMLAGYTKAGELELAREMFLEMPMKDDVSWSTMIVGFAHNGYFEEAFSFFRELQRKG 264
Query: 223 VRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGK 282
+R N SL VLS CA +L+ G+ +H + + V V + L+ Y KCG ++ +
Sbjct: 265 MRPNETSLTGVLSACAQAGALEFGKILHGFIEKSGLAWIVSVNNALLDTYSKCGNVLMAQ 324
Query: 283 LIFDNFAS-KDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYT 341
L+F+ + ++IV W S+++ A +G GE+++ +FH+M SG+ PD++ + +L ACS+
Sbjct: 325 LVFERIMNERNIVSWTSMMAALAMHGHGEEAIGIFHKMEESGIRPDEIAFISLLYACSHA 384
Query: 342 GKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGS 401
G V++G E F+ MK Y +EP EHY CMVDL GRAGQ++ A + + MP AIIW +
Sbjct: 385 GLVEQGCEYFDKMKGMYNIEPSIEHYGCMVDLYGRAGQLQKAYEFVCQMPIPCTAIIWRT 444
Query: 402 LLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNV 461
LLGAC H + LAE ++L +L+P N+ ++LLSN YA G++ D A +R++M ++ +
Sbjct: 445 LLGACSMHGDVKLAEQVKERLSELDPNNSSDHVLLSNAYAVAGKWKDAASVRRSMTEQRI 504
Query: 462 IKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVD 521
K PG S IEV+K ++ F ++ E I L E GY P+ VLHD++
Sbjct: 505 TKTPGWSMIEVDKIMYTFLAGTKQYKITEEAYKKLKEIIRRLRVEGGYVPEIGRVLHDIE 564
Query: 522 EEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILR 581
EEEK S+ HSEKLAVA+G+ +L +G IR++KNLR+C DCH+ +KLIS++ EI++R
Sbjct: 565 EEEKEGSVSVHSEKLAVAFGIARLCKGRTIRIVKNLRICRDCHAVMKLISQIYKVEIVVR 624
Query: 582 DANRFHHFKDGLCSCRDYW 600
D +RFH FKDG CSCRDYW
Sbjct: 625 DRSRFHSFKDGYCSCRDYW 643
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 159/311 (51%), Gaps = 15/311 (4%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVV 69
T ++ Y E G + A +F +MPE N ++W M+ R + R LFD+MP ++++
Sbjct: 145 TTLISMYGECGFVGFARKVFDEMPEPNAIAWNAMVTACCRGGDMKGGRELFDLMPVRNLM 204
Query: 70 AQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEK- 128
+ M+ GY + G ++ RE+F EMP K+ +SW+TMI G+ +N + A F + K
Sbjct: 205 SWNVMLAGYTKAGELELAREMFLEMPMKDDVSWSTMIVGFAHNGYFEEAFSFFRELQRKG 264
Query: 129 ---NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVA-----SNSMILGLGQNGEVQKA 180
NE S T +L Q G ++ ++ KS +A +N+++ + G V A
Sbjct: 265 MRPNETSLTGVLSACAQAGALEFG-KILHGFIEKSGLAWIVSVNNALLDTYSKCGNVLMA 323
Query: 181 RVVFDQ-MREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCAS 239
++VF++ M E++ +W+ M+ G+ E I +F M++ G+R + + IS+L C+
Sbjct: 324 QLVFERIMNERNIVSWTSMMAALAMHGHGEEAIGIFHKMEESGIRPDEIAFISLLYACSH 383
Query: 240 LASLDHGRQVHAQLVRCQFDVDVYVA--SVLITMYIKCGELVKG-KLIFDNFASKDIVMW 296
++ G + ++ + ++++ + ++ +Y + G+L K + + ++W
Sbjct: 384 AGLVEQGCEYFDKM-KGMYNIEPSIEHYGCMVDLYGRAGQLQKAYEFVCQMPIPCTAIIW 442
Query: 297 NSIISGYAQYG 307
+++ + +G
Sbjct: 443 RTLLGACSMHG 453
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 68/323 (21%), Positives = 124/323 (38%), Gaps = 93/323 (28%)
Query: 149 AWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYE 208
A LF+ P V N++I GL ++ Q + + F +MR
Sbjct: 58 ACRLFRYTPNPDVFMHNTLIRGLYESDRPQDSLLKFIEMRRNS----------------- 100
Query: 209 LEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVL 268
D F S ++ A+L S+ G Q+H Q + D ++V + L
Sbjct: 101 FSPPDSF-------------SFAFIVKAAANLRSVRVGIQLHCQALVHGLDTHLFVGTTL 147
Query: 269 ITMYIKC-------------------------------GELVKGKLIFDNFASKDIVMWN 297
I+MY +C G++ G+ +FD ++++ WN
Sbjct: 148 ISMYGECGFVGFARKVFDEMPEPNAIAWNAMVTACCRGGDMKGGRELFDLMPVRNLMSWN 207
Query: 298 SIISGYAQYGLGEKSLKVFHEM------------------------FS-------SGVMP 326
+++GY + G E + ++F EM FS G+ P
Sbjct: 208 VMLAGYTKAGELELAREMFLEMPMKDDVSWSTMIVGFAHNGYFEEAFSFFRELQRKGMRP 267
Query: 327 DDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKL 386
++ +L GVLSAC+ G ++ G+ + ++ L + + A ++D + G V A +
Sbjct: 268 NETSLTGVLSACAQAGALEFGKILHGFIEKSGLAWIVSVNNA-LLDTYSKCGNVLMAQLV 326
Query: 387 IEAMPFEPDAIIWGSLLGACRTH 409
E + E + + W S++ A H
Sbjct: 327 FERIMNERNIVSWTSMMAALAMH 349
Score = 43.9 bits (102), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 74/177 (41%), Gaps = 13/177 (7%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV----VSWTVMLGGFIRDSRIDDA 56
M ERN+VSWT+M+ G EA +F +M E + +++ +L ++
Sbjct: 331 MNERNIVSWTSMMAALAMHGHGEEAIGIFHKMEESGIRPDEIAFISLLYACSHAGLVEQG 390
Query: 57 RRLFDMMP-----EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKK-NVISWTTMISGYV 110
FD M E + MV Y + G++ + E +MP I W T++
Sbjct: 391 CEYFDKMKGMYNIEPSIEHYGCMVDLYGRAGQLQKAYEFVCQMPIPCTAIIWRTLLGACS 450
Query: 111 NNNRIDVARKLFEVMPE---KNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVAS 164
+ + +A ++ E + E N + Y G+ +DA + ++M + + +
Sbjct: 451 MHGDVKLAEQVKERLSELDPNNSSDHVLLSNAYAVAGKWKDAASVRRSMTEQRITKT 507
>gi|357118962|ref|XP_003561216.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 900
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 231/639 (36%), Positives = 347/639 (54%), Gaps = 63/639 (9%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MP R+ V+W A+V GY G+ A + +M E+ D DA L
Sbjct: 286 MPARDRVAWNALVAGYARNGLAEAAVGMVVRMQEE--------------DGERPDAVTLV 331
Query: 61 DMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARK 120
++P LG C++ R FDE V T ++ Y +D ARK
Sbjct: 332 SVLP----ACADAQALGACREVHAFAVRGGFDE----QVNVSTAILDVYCKCGAVDSARK 383
Query: 121 LFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMIL----------- 169
+F+ M ++N VSW AM+ GY + G +A LFK M + V ++ +L
Sbjct: 384 VFDGMQDRNSVSWNAMIKGYAENGDATEALALFKRMVGEGVDVTDVSVLAALHACGELGF 443
Query: 170 --------------GLGQNGEVQKARV--------------VFDQMREKDDATWSGMIKV 201
GL N V A + VFD++ K +W+ MI
Sbjct: 444 LDEGRRVHELLVRIGLESNVNVMNALITMYCKCKRTDLAAQVFDELGYKTRVSWNAMILG 503
Query: 202 YERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVD 261
+ G + + LF+ MQ E V+ + +L+S++ A ++ R +H +R D D
Sbjct: 504 CTQNGSSEDAVRLFSRMQLENVKPDSFTLVSIIPALADISDPLQARWIHGYSIRLHLDQD 563
Query: 262 VYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFS 321
VYV + LI MY KCG + + +F++ + ++ WN++I GY +G G+ ++++F EM S
Sbjct: 564 VYVLTALIDMYAKCGRVSIARSLFNSARDRHVITWNAMIHGYGSHGSGKVAVELFEEMKS 623
Query: 322 SGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVE 381
SG +P++ T + VLSACS+ G V EG+E F SMK Y +EP EHY MVDLLGRAG++
Sbjct: 624 SGKVPNETTFLSVLSACSHAGLVDEGQEYFSSMKEDYGLEPGMEHYGTMVDLLGRAGKLH 683
Query: 382 DAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYA 441
+A I+ MP EP ++G++LGAC+ H ++LAE +A+++ +LEP+ ++LL+NIYA
Sbjct: 684 EAWSFIQKMPMEPGISVYGAMLGACKLHKNVELAEESAQRIFELEPEEGVYHVLLANIYA 743
Query: 442 SQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIG 501
+ + DVA +R M K+ + K PG S ++++ ++H F +H + I L K+
Sbjct: 744 NASLWKDVARVRTAMEKKGLQKTPGWSIVQLKNEIHTFYS-GSTNHQQAKDIYARLAKLI 802
Query: 502 GLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCG 561
++ GY PD+ + HDV+++ K L HSEKLA+AYGL++ G I++ KNLRVC
Sbjct: 803 EEIKAVGYVPDTDSI-HDVEDDVKAQLLNTHSEKLAIAYGLIRTAPGTTIQIKKNLRVCK 861
Query: 562 DCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
DCH+A KLIS V GREII+RD RFHHFKDG CSC DYW
Sbjct: 862 DCHNATKLISLVTGREIIMRDIQRFHHFKDGKCSCGDYW 900
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 138/308 (44%), Gaps = 63/308 (20%)
Query: 131 VSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREK 190
++ TA+ Y +C R DA +F MP + VA N+++ G +NG + A + +M+E+
Sbjct: 261 LAATALANMYAKCRRPGDARRVFDRMPARDRVAWNALVAGYARNGLAEAAVGMVVRMQEE 320
Query: 191 DDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVH 250
D G R + +L+SVL CA +L R+VH
Sbjct: 321 D------------------------------GERPDAVTLVSVLPACADAQALGACREVH 350
Query: 251 AQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGE 310
A VR FD V V++ ++ +Y KCG + + +FD ++ V WN++I GYA+ G
Sbjct: 351 AFAVRGGFDEQVNVSTAILDVYCKCGAVDSARKVFDGMQDRNSVSWNAMIKGYAENGDAT 410
Query: 311 KSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFE---------------SMK 355
++L +F M GV DV+++ L AC G + EGR + E ++
Sbjct: 411 EALALFKRMVGEGVDVTDVSVLAALHACGELGFLDEGRRVHELLVRIGLESNVNVMNALI 470
Query: 356 SKYLVEPKTEHYACMVDLLG---------------RAGQVEDAMKLIEAMPFE---PDAI 397
+ Y +T+ A + D LG + G EDA++L M E PD+
Sbjct: 471 TMYCKCKRTDLAAQVFDELGYKTRVSWNAMILGCTQNGSSEDAVRLFSRMQLENVKPDSF 530
Query: 398 IWGSLLGA 405
S++ A
Sbjct: 531 TLVSIIPA 538
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 91/176 (51%), Gaps = 3/176 (1%)
Query: 229 SLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNF 288
+ S+L +CA+ A L GR VHAQL + A+ L MY KC + +FD
Sbjct: 227 TFTSLLKLCAARADLATGRAVHAQLAARGLSPEALAATALANMYAKCRRPGDARRVFDRM 286
Query: 289 ASKDIVMWNSIISGYAQYGLGEKSLKVFHEMF-SSGVMPDDVTLVGVLSACSYTGKVKEG 347
++D V WN++++GYA+ GL E ++ + M G PD VTLV VL AC+ +
Sbjct: 287 PARDRVAWNALVAGYARNGLAEAAVGMVVRMQEEDGERPDAVTLVSVLPACADAQALGAC 346
Query: 348 REIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
RE+ + + + + ++D+ + G V+ A K+ + M + +++ W +++
Sbjct: 347 REV-HAFAVRGGFDEQVNVSTAILDVYCKCGAVDSARKVFDGMQ-DRNSVSWNAMI 400
>gi|334185549|ref|NP_188908.2| uncharacterized protein [Arabidopsis thaliana]
gi|332643144|gb|AEE76665.1| uncharacterized protein [Arabidopsis thaliana]
Length = 938
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 242/648 (37%), Positives = 356/648 (54%), Gaps = 50/648 (7%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEK-----NVVSWTVMLGG--------- 46
M ERNVVSWT+M+ GY +A LF++M N V+ ++
Sbjct: 195 MSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLET 254
Query: 47 ------FIRDS--------------------RIDDARRLFDMMPEKDVVAQTNMVLGYCQ 80
FIR+S ID A+RLFD ++ M Y +
Sbjct: 255 GEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVR 314
Query: 81 DGRVDEGREIFDEMPKKNV----ISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSW--- 133
G E +F+ M V IS + IS I + + SW
Sbjct: 315 QGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNI 374
Query: 134 -TAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDD 192
A++ Y +C R A+ +F M K+VV NS++ G +NGEV A F+ M EK+
Sbjct: 375 CNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNI 434
Query: 193 ATWSGMIKVYERKGYELEVIDLFTLMQ-KEGVRVNFPSLISVLSVCASLASLDHGRQVHA 251
+W+ +I + E I++F MQ +EGV + +++S+ S C L +LD + ++
Sbjct: 435 VSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYY 494
Query: 252 QLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEK 311
+ + +DV + + L+ M+ +CG+ IF++ ++D+ W + I A G E+
Sbjct: 495 YIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAER 554
Query: 312 SLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMV 371
++++F +M G+ PD V VG L+ACS+ G V++G+EIF SM + V P+ HY CMV
Sbjct: 555 AIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMV 614
Query: 372 DLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAG 431
DLLGRAG +E+A++LIE MP EP+ +IW SLL ACR +++A AA+K+ L P+ G
Sbjct: 615 DLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTG 674
Query: 432 PYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHP 491
Y+LLSN+YAS GR++D+A++R +M+++ + KPPG S I++ K H FT D SHPE P
Sbjct: 675 SYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGD-ESHPEMP 733
Query: 492 MIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPI 551
I ML+++ G+ PD S VL DVDE+EK+ L HSEKLA+AYGL+ +G I
Sbjct: 734 NIEAMLDEVSQRASHLGHVPDLSNVLMDVDEKEKIFMLSRHSEKLAMAYGLISSNKGTTI 793
Query: 552 RVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDY 599
R++KNLRVC DCHS K SKV REIILRD NRFH+ + G CSC D+
Sbjct: 794 RIVKNLRVCSDCHSFAKFASKVYNREIILRDNNRFHYIRQGKCSCGDF 841
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 93/381 (24%), Positives = 180/381 (47%), Gaps = 33/381 (8%)
Query: 57 RRLFDMMPEKDVVAQTNMVLGYCQDGRVDE---GREIFDEMPK-KNVISWTTMISGYVNN 112
R L + DV T +V C+ G + +E+F+ + ++I GY ++
Sbjct: 53 RSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYASS 112
Query: 113 NRIDVARKLFEVM------PEKNEVSWTAMLMGYTQCGR-------IQDAWELFKAMPMK 159
+ A LF M P+K + G + C + IQ + K K
Sbjct: 113 GLCNEAILLFLRMMNSGISPDKYTFPF-----GLSACAKSRAKGNGIQIHGLIVKMGYAK 167
Query: 160 SVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLF-TLM 218
+ NS++ + GE+ AR VFD+M E++ +W+ MI Y R+ + + +DLF ++
Sbjct: 168 DLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMV 227
Query: 219 QKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGEL 278
+ E V N +++ V+S CA L L+ G +V+A + +V+ + S L+ MY+KC +
Sbjct: 228 RDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAI 287
Query: 279 VKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSAC 338
K +FD + + ++ + N++ S Y + GL ++L VF+ M SGV PD ++++ +S+C
Sbjct: 288 DVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSC 347
Query: 339 SYTGKVKEGREIFESMKSKYLVEPKTEHY----ACMVDLLGRAGQVEDAMKLIEAMPFEP 394
S + G+ Y++ E + ++D+ + + + A ++ + M
Sbjct: 348 SQLRNILWGKSCH-----GYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMS-NK 401
Query: 395 DAIIWGSLLGACRTHMKLDLA 415
+ W S++ + ++D A
Sbjct: 402 TVVTWNSIVAGYVENGEVDAA 422
>gi|297738694|emb|CBI27939.3| unnamed protein product [Vitis vinifera]
Length = 764
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 221/645 (34%), Positives = 354/645 (54%), Gaps = 49/645 (7%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDM 62
E +++ A V Y++ + F M +N+ S +L GF D R+
Sbjct: 122 ESDILISNAFVTMYMKTQSVENGWQFFKAMMIENLASRNNLLSGFCDTETCDQGPRILIQ 181
Query: 63 MP----EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVIS----WTTMISGYVNNNR 114
+ E ++ +++ G ++EG+ I ++ K + W ++++ Y
Sbjct: 182 LLVEGFEPNMYTFISILKTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGS 241
Query: 115 IDVARKLFEVMPEKNEVSWTAMLMGYT-------------------------------QC 143
+ A K+F +PE++ VSWTA++ G+ C
Sbjct: 242 ANYACKVFGEIPERDVVSWTALITGFVAEGYGSGLRIFNQMLAEGFNPNMYTFISILRSC 301
Query: 144 GRIQDAWELFKAMPMKSVVAS--------NSMILGLGQNGEVQKARVVFDQMREKDDATW 195
+ D +L K + + V S +++ +N ++ A +F+++ ++D W
Sbjct: 302 SSLSDV-DLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAW 360
Query: 196 SGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVR 255
+ ++ Y + G + + F MQ+EGV+ N +L S LS C+ +A+LD GRQ+H+ ++
Sbjct: 361 TVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIK 420
Query: 256 CQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKV 315
D++VAS L+ MY KCG + +++FD S+D V WN+II GY+Q+G G K+LK
Sbjct: 421 AGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKA 480
Query: 316 FHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLG 375
F M G +PD+VT +GVLSACS+ G ++EG++ F S+ Y + P EHYACMVD+LG
Sbjct: 481 FEAMLDEGTVPDEVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACMVDILG 540
Query: 376 RAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYIL 435
RAG+ + IE M + +IW ++LGAC+ H ++ E AA KL +LEP+ YIL
Sbjct: 541 RAGKFHEVESFIEEMKLTSNVLIWETVLGACKMHGNIEFGERAAMKLFELEPEIDSNYIL 600
Query: 436 LSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMR 495
LSN++A++G + DV +R M R V K PGCSW+EV +VH+F D SHP+ I
Sbjct: 601 LSNMFAAKGMWDDVTNVRALMSTRGVKKEPGCSWVEVNGQVHVFLSHDG-SHPKIREIHL 659
Query: 496 MLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMK 555
L+ + L GY P++ VLH+V + EK L YHSE+LA+A+ L+ IR+ K
Sbjct: 660 KLQDLHQKLMSVGYTPNTDHVLHNVSDREKQELLFYHSERLALAFALLSTSTRKTIRIFK 719
Query: 556 NLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
NLR+CGDCH +K IS++ +E+++RD N FHHFK+G CSC+++W
Sbjct: 720 NLRICGDCHDFMKSISEITNQELVVRDINCFHHFKNGSCSCQNFW 764
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 82/370 (22%), Positives = 154/370 (41%), Gaps = 45/370 (12%)
Query: 102 WTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSV 161
W+++++ YV + AR++ E MP ++ W L +Q+A +LF M +
Sbjct: 27 WSSLVNVYVKCESLQCARQVLEEMPIQDVQQWNQKLSSANSPYPLQEAVQLFYLMRHTRI 86
Query: 162 ---------VASNSMILGLGQNGEVQKARV-------------VFDQMREKDDATWSG-- 197
+ S + LG GE A V F M K + +G
Sbjct: 87 RLNQFIFASLISAAASLGDNHYGESIHACVCKYGFESDILISNAFVTMYMKTQSVENGWQ 146
Query: 198 -----MIKVYERKGYEL------EVID----LFTLMQKEGVRVNFPSLISVLSVCASLAS 242
MI+ + L E D + + EG N + IS+L CAS
Sbjct: 147 FFKAMMIENLASRNNLLSGFCDTETCDQGPRILIQLLVEGFEPNMYTFISILKTCASKGD 206
Query: 243 LDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISG 302
L+ G+ +H Q+++ + D ++ + L+ +Y KCG +F +D+V W ++I+G
Sbjct: 207 LNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPERDVVSWTALITG 266
Query: 303 YAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEP 362
+ G G L++F++M + G P+ T + +L +CS V G+++ + L +
Sbjct: 267 FVAEGYG-SGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSL-DG 324
Query: 363 KTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKL 422
+VD+ + +EDA + + + D W ++ + + E A K
Sbjct: 325 NDFVGTALVDMYAKNRFLEDAETIFNRL-IKRDLFAWTVIVAG---YAQDGQGEKAVKCF 380
Query: 423 LQLEPKNAGP 432
+Q++ + P
Sbjct: 381 IQMQREGVKP 390
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 89/215 (41%), Gaps = 14/215 (6%)
Query: 261 DVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNS-IISGYAQYGLGEKSLKVFHEM 319
D ++ S L+ +Y+KC L + + + +D+ WN + S + Y L E ++++F+ M
Sbjct: 23 DSHLWSSLVNVYVKCESLQCARQVLEEMPIQDVQQWNQKLSSANSPYPLQE-AVQLFYLM 81
Query: 320 FSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQ 379
+ + + ++SA + G G I + KY E V + +
Sbjct: 82 RHTRIRLNQFIFASLISAAASLGDNHYGESIHACV-CKYGFESDILISNAFVTMYMKTQS 140
Query: 380 VEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQL-----EPKNAGPYI 434
VE+ + +AM E A L G C T + + + L+QL EP N +I
Sbjct: 141 VENGWQFFKAMMIENLASRNNLLSGFCDT----ETCDQGPRILIQLLVEGFEP-NMYTFI 195
Query: 435 LLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSW 469
+ AS+G ++ + + K I P W
Sbjct: 196 SILKTCASKGDLNEGKAIHGQVIKSG-INPDSHLW 229
>gi|449440989|ref|XP_004138266.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449524140|ref|XP_004169081.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 695
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 221/612 (36%), Positives = 356/612 (58%), Gaps = 23/612 (3%)
Query: 8 SWTAMVRGYVEEGMITEAGTLFWQMPEKNV----VSWTVMLGGFIRDSRIDDARRLFDMM 63
++ M+RG + A LF +M EK+V +++ +L R + + ++ ++
Sbjct: 88 AYNVMIRGLAFKRSPDNALLLFKKMHEKSVQHDKFTFSSVLKACSRMKALREGEQVHALI 147
Query: 64 PEK----DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRID--- 116
+ + + ++ Y G++ R +FD MP++++++W +M+SGY N D
Sbjct: 148 LKSGFKSNEFVENTLIQMYANCGQIGVARHVFDGMPERSIVAWNSMLSGYTKNGLWDEVV 207
Query: 117 -VARKLFEVMPEKNEVSWTAMLMGYTQCGRIQD--AWELF-KAMPMKSVVASNSMILGL- 171
+ RK+ E+ E ++V+ ++LM CGR+ + EL + + K + +N++ L
Sbjct: 208 KLFRKILELRIEFDDVTMISVLMA---CGRLANLEIGELIGEYIVSKGLRRNNTLTTSLI 264
Query: 172 ---GQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFP 228
+ G+V AR +FD+M ++D WS MI Y + E ++LF MQK V N
Sbjct: 265 DMYAKCGQVDTARKLFDEMDKRDVVAWSAMISGYAQADRCKEALNLFHEMQKGNVYPNEV 324
Query: 229 SLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNF 288
+++SVL CA L + + G+ VH + + + + V + + LI Y KCG + + +F
Sbjct: 325 TMVSVLYSCAMLGAYETGKWVHFYIKKKKMKLTVTLGTQLIDFYAKCGYIDRSVEVFKEM 384
Query: 289 ASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGR 348
+ K++ W ++I G A G G+ +L+ F M + V P+DVT +GVLSACS+ V +GR
Sbjct: 385 SFKNVFTWTALIQGLANNGEGKMALEFFSSMLENDVKPNDVTFIGVLSACSHACLVDQGR 444
Query: 349 EIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRT 408
+F SM+ + +EP+ EHY CMVD+LGRAG +E+A + I+ MPF P+A++W +LL +CR
Sbjct: 445 HLFNSMRRDFDIEPRIEHYGCMVDILGRAGFLEEAYQFIDNMPFPPNAVVWRTLLASCRA 504
Query: 409 HMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCS 468
H +++AE + + + +LEP ++G YILLSN YA GR D +R ++++ + K PGCS
Sbjct: 505 HKNIEMAEKSLEHITRLEPAHSGDYILLSNTYALVGRVEDAIRVRSLIKEKEIKKIPGCS 564
Query: 469 WIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHS 528
IE++ VH F D H I L+K+ ++ GY P++ + +EE K S
Sbjct: 565 LIELDGVVHEFFSEDG-EHKHSKEIHDALDKMMKQIKRLGYVPNTDDARLEAEEESKETS 623
Query: 529 LRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHH 588
+ +HSEKLA+AYGL++ IR+ KNLR+C DCH+A K IS+V R II+RD NRFHH
Sbjct: 624 VSHHSEKLAIAYGLIRTSPRTTIRISKNLRMCRDCHNATKFISQVFERMIIVRDRNRFHH 683
Query: 589 FKDGLCSCRDYW 600
FKDGLCSC DYW
Sbjct: 684 FKDGLCSCNDYW 695
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 97/360 (26%), Positives = 181/360 (50%), Gaps = 22/360 (6%)
Query: 56 ARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRI 115
RRL D + + V+ ++L +D IF+ + K ++ MI G
Sbjct: 47 TRRLLDPIITEAVLESAALLL----PDTIDYALSIFNHIDKPESSAYNVMIRGLAFKRSP 102
Query: 116 DVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVAS-----NS 166
D A LF+ M EK ++ +++++L ++ +++ E A+ +KS S N+
Sbjct: 103 DNALLLFKKMHEKSVQHDKFTFSSVLKACSRMKALREG-EQVHALILKSGFKSNEFVENT 161
Query: 167 MILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVN 226
+I G++ AR VFD M E+ W+ M+ Y + G EV+ LF + + + +
Sbjct: 162 LIQMYANCGQIGVARHVFDGMPERSIVAWNSMLSGYTKNGLWDEVVKLFRKILELRIEFD 221
Query: 227 FPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFD 286
++ISVL C LA+L+ G + +V + + + LI MY KCG++ + +FD
Sbjct: 222 DVTMISVLMACGRLANLEIGELIGEYIVSKGLRRNNTLTTSLIDMYAKCGQVDTARKLFD 281
Query: 287 NFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKE 346
+D+V W+++ISGYAQ +++L +FHEM V P++VT+V VL +C+ G +
Sbjct: 282 EMDKRDVVAWSAMISGYAQADRCKEALNLFHEMQKGNVYPNEVTMVSVLYSCAMLGAYET 341
Query: 347 GREI---FESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
G+ + + K K V T+ ++D + G ++ ++++ + M F+ + W +L+
Sbjct: 342 GKWVHFYIKKKKMKLTVTLGTQ----LIDFYAKCGYIDRSVEVFKEMSFK-NVFTWTALI 396
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 132/256 (51%), Gaps = 5/256 (1%)
Query: 177 VQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSV 236
+ A +F+ + + + + ++ MI+ K + LF M ++ V+ + + SVL
Sbjct: 71 IDYALSIFNHIDKPESSAYNVMIRGLAFKRSPDNALLLFKKMHEKSVQHDKFTFSSVLKA 130
Query: 237 CASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMW 296
C+ + +L G QVHA +++ F + +V + LI MY CG++ + +FD + IV W
Sbjct: 131 CSRMKALREGEQVHALILKSGFKSNEFVENTLIQMYANCGQIGVARHVFDGMPERSIVAW 190
Query: 297 NSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKS 356
NS++SGY + GL ++ +K+F ++ + DDVT++ VL AC ++ G I E + S
Sbjct: 191 NSMLSGYTKNGLWDEVVKLFRKILELRIEFDDVTMISVLMACGRLANLEIGELIGEYIVS 250
Query: 357 KYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAE 416
K L T ++D+ + GQV+ A KL + M + D + W +++ + + D +
Sbjct: 251 KGLRRNNTL-TTSLIDMYAKCGQVDTARKLFDEMD-KRDVVAWSAMISG---YAQADRCK 305
Query: 417 VAAKKLLQLEPKNAGP 432
A +++ N P
Sbjct: 306 EALNLFHEMQKGNVYP 321
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 87/336 (25%), Positives = 162/336 (48%), Gaps = 23/336 (6%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV----VSWTVMLGGFIRDSRIDDA 56
MPER++V+W +M+ GY + G+ E LF ++ E + V+ +L R + ++
Sbjct: 182 MPERSIVAWNSMLSGYTKNGLWDEVVKLFRKILELRIEFDDVTMISVLMACGRLANLEIG 241
Query: 57 RRLFDMMPEKDV----VAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+ + + K + T+++ Y + G+VD R++FDEM K++V++W+ MISGY
Sbjct: 242 ELIGEYIVSKGLRRNNTLTTSLIDMYAKCGQVDTARKLFDEMDKRDVVAWSAMISGYAQA 301
Query: 113 NRIDVARKLFEVMPE----KNEVSWTAMLMGYTQCGRIQDA-WELF--KAMPMK-SVVAS 164
+R A LF M + NEV+ ++L G + W F K MK +V
Sbjct: 302 DRCKEALNLFHEMQKGNVYPNEVTMVSVLYSCAMLGAYETGKWVHFYIKKKKMKLTVTLG 361
Query: 165 NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVR 224
+I + G + ++ VF +M K+ TW+ +I+ G ++ F+ M + V+
Sbjct: 362 TQLIDFYAKCGYIDRSVEVFKEMSFKNVFTWTALIQGLANNGEGKMALEFFSSMLENDVK 421
Query: 225 VNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVA--SVLITMYIKCGELVKGK 282
N + I VLS C+ +D GR + + R FD++ + ++ + + G L +
Sbjct: 422 PNDVTFIGVLSACSHACLVDQGRHLFNSMRR-DFDIEPRIEHYGCMVDILGRAGFLEEAY 480
Query: 283 LIFDNFA-SKDIVMWNSIIS---GYAQYGLGEKSLK 314
DN + V+W ++++ + + EKSL+
Sbjct: 481 QFIDNMPFPPNAVVWRTLLASCRAHKNIEMAEKSLE 516
>gi|225461979|ref|XP_002267354.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 632
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 204/461 (44%), Positives = 295/461 (63%), Gaps = 1/461 (0%)
Query: 140 YTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMI 199
Y CG + +A LF+ MP + VV N MI L + G+ + A +F +M E++ +W+ MI
Sbjct: 173 YASCGEMGEARLLFEKMPQRDVVTWNIMIAQLIKQGDHEGAYDLFSRMPERNVRSWTSMI 232
Query: 200 KVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFD 259
Y + G E I LF M++ GV+ N ++++VL+ CA L +LD G ++H R F
Sbjct: 233 AGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLAACADLGALDLGMRIHEYSNRHGFK 292
Query: 260 VDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEM 319
+V +++ LI MY+KCG L + +F+ + +V W+++I G A +G E++L++F +M
Sbjct: 293 RNVRISNTLIDMYVKCGCLEEACKVFEEMEERTVVSWSAMIGGLAMHGRAEEALRLFSDM 352
Query: 320 FSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQ 379
G+ P+ VT +G+L ACS+ G + EGR F SM Y + P+ EHY CMVDLL RAG
Sbjct: 353 SQVGIEPNGVTFIGLLHACSHMGLISEGRRFFASMTRDYGIIPQIEHYGCMVDLLSRAGL 412
Query: 380 VEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNI 439
+ +A + I MP +P+ ++WG+LLGACR H +++AE A K LL+L+P N G Y++LSNI
Sbjct: 413 LHEAHEFILNMPMKPNGVVWGALLGACRVHKNVEMAEEAIKHLLELDPLNDGYYVVLSNI 472
Query: 440 YASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEK 499
YA GR+ D A +RK M+ R V K PG S I V+ VH F + SHP+ I + E+
Sbjct: 473 YAEAGRWEDTARVRKFMKDRQVKKTPGWSSITVDGVVHEFVAGE-ESHPDTEQIFQRWEE 531
Query: 500 IGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRV 559
+ +R GY P++S VL D++E EKV + HSEKLA+ +GL+ P PIR+MKNLR+
Sbjct: 532 LLEEMRLKGYVPNTSVVLLDIEEGEKVKFVSRHSEKLALVFGLMNTPAETPIRIMKNLRI 591
Query: 560 CGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
C DCHSA KLIS ++ REI++RD NRFH F D CSCRDYW
Sbjct: 592 CEDCHSAFKLISAIVNREIVVRDRNRFHCFNDNSCSCRDYW 632
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 130/294 (44%), Gaps = 47/294 (15%)
Query: 9 WTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDS----RIDDARRLFDMMP 64
W + ++ E +A LF+++ + +V T +R + + R L ++
Sbjct: 96 WNSCLKALAEGDSPIDAIMLFYRLRQYDVCPDTFTCSSVLRACLNLLDLSNGRILHGVVE 155
Query: 65 E----KDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARK 120
+ ++ Q +V Y G + E R +F++MP+++V++W MI+ + + A
Sbjct: 156 KVGFRSNLYLQNMIVHLYASCGEMGEARLLFEKMPQRDVVTWNIMIAQLIKQGDHEGAYD 215
Query: 121 LFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMP----------------------- 157
LF MPE+N SWT+M+ GY QCG+ ++A LF M
Sbjct: 216 LFSRMPERNVRSWTSMIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLAACADLGA 275
Query: 158 ----------------MKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKV 201
++V SN++I + G +++A VF++M E+ +WS MI
Sbjct: 276 LDLGMRIHEYSNRHGFKRNVRISNTLIDMYVKCGCLEEACKVFEEMEERTVVSWSAMIGG 335
Query: 202 YERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVR 255
G E + LF+ M + G+ N + I +L C+ + + GR+ A + R
Sbjct: 336 LAMHGRAEEALRLFSDMSQVGIEPNGVTFIGLLHACSHMGLISEGRRFFASMTR 389
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 98/199 (49%), Gaps = 12/199 (6%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MP+R+VV+W M+ +++G A LF +MPE+NV SWT M+ G+++ + +A LF
Sbjct: 189 MPQRDVVTWNIMIAQLIKQGDHEGAYDLFSRMPERNVRSWTSMIAGYVQCGKAKEAIHLF 248
Query: 61 DMMPEKDVVAQ---TNMVLGYCQD-GRVDEGREIFDEMP----KKNVISWTTMISGYVNN 112
M E V VL C D G +D G I + K+NV T+I YV
Sbjct: 249 AKMEEAGVKCNEVTVVAVLAACADLGALDLGMRIHEYSNRHGFKRNVRISNTLIDMYVKC 308
Query: 113 NRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGL- 171
++ A K+FE M E+ VSW+AM+ G GR ++A LF M + + +GL
Sbjct: 309 GCLEEACKVFEEMEERTVVSWSAMIGGLAMHGRAEEALRLFSDMSQVGIEPNGVTFIGLL 368
Query: 172 ---GQNGEVQKARVVFDQM 187
G + + R F M
Sbjct: 369 HACSHMGLISEGRRFFASM 387
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 129/269 (47%), Gaps = 35/269 (13%)
Query: 180 ARVVFDQMREKDDAT--WSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVC 237
A+ +F + ++ T W+ +K ++ I LF +++ V + + SVL C
Sbjct: 79 AQQIFKCVEKQKPETFVWNSCLKALAEGDSPIDAIMLFYRLRQYDVCPDTFTCSSVLRAC 138
Query: 238 ASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWN 297
+L L +GR +H + + F ++Y+ ++++ +Y CGE+ + +L+F+ +D+V WN
Sbjct: 139 LNLLDLSNGRILHGVVEKVGFRSNLYLQNMIVHLYASCGEMGEARLLFEKMPQRDVVTWN 198
Query: 298 -------------------------------SIISGYAQYGLGEKSLKVFHEMFSSGVMP 326
S+I+GY Q G ++++ +F +M +GV
Sbjct: 199 IMIAQLIKQGDHEGAYDLFSRMPERNVRSWTSMIAGYVQCGKAKEAIHLFAKMEEAGVKC 258
Query: 327 DDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKL 386
++VT+V VL+AC+ G + G I E +++ + ++D+ + G +E+A K+
Sbjct: 259 NEVTVVAVLAACADLGALDLGMRIHE-YSNRHGFKRNVRISNTLIDMYVKCGCLEEACKV 317
Query: 387 IEAMPFEPDAIIWGSLLGACRTHMKLDLA 415
E M E + W +++G H + + A
Sbjct: 318 FEEME-ERTVVSWSAMIGGLAMHGRAEEA 345
>gi|147811587|emb|CAN70294.1| hypothetical protein VITISV_005974 [Vitis vinifera]
Length = 562
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 211/528 (39%), Positives = 319/528 (60%), Gaps = 10/528 (1%)
Query: 82 GRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEK----NEVSWTAML 137
G +D IF +M + + TM+ G+V + + A ++ M E+ + ++ +L
Sbjct: 36 GSMDYACSIFRQMDEPGSFZFNTMMRGHVKDMNTEEALITYKEMAERGVKPDNFTYPTLL 95
Query: 138 MGYTQCGRIQDAWE----LFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDA 193
+ +++ + + K V NS+I G+ GE+ VF+QM E+ A
Sbjct: 96 KACARLPAVEEGMQVHAHILKLGLENDVFVQNSLISMYGKCGEIGVCCAVFEQMNERSVA 155
Query: 194 TWSGMIKVYERKGYELEVIDLFTLMQKEGV-RVNFPSLISVLSVCASLASLDHGRQVHAQ 252
+WS +I + G + + L M EG R L+SVLS C L +LD GR VH
Sbjct: 156 SWSALITAHASLGMWSDCLRLLGDMSNEGYWRAEESILVSVLSACTHLGALDLGRSVHGF 215
Query: 253 LVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKS 312
L+R ++V V + LI MY+KCG L KG +F A K+ + ++ +ISG A +G G +
Sbjct: 216 LLRNVSGLNVIVETSLIEMYLKCGXLYKGMCLFQKMAKKNKLSYSVMISGLAMHGYGREG 275
Query: 313 LKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVD 372
L++F EM G+ PDD+ VGVL+ACS+ G V+EG + F MK ++ +EP +HY CMVD
Sbjct: 276 LRIFTEMLEQGLEPDDIVYVGVLNACSHAGLVQEGLQCFNRMKLEHGIEPTIQHYGCMVD 335
Query: 373 LLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGP 432
L+GRAG++++A++LI++MP EP+ ++W SLL A + H L E+AAK+L +L+ + A
Sbjct: 336 LMGRAGKIDEALELIKSMPMEPNDVLWRSLLSASKVHNNLQAGEIAAKQLFKLDSQKASD 395
Query: 433 YILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPM 492
Y++LSN+YA R+ DVA R NM + + + PG S +EV++K+H F +D HP+
Sbjct: 396 YVVLSNMYAQAQRWEDVARTRTNMFSKGLSQRPGFSLVEVKRKMHRFVSQD-AGHPQSES 454
Query: 493 IMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIR 552
+ ML ++ L+ GY PD++ VL DVDEEEK L HS+KLA+AY L+ +G P+R
Sbjct: 455 VYEMLYQMEWQLKFEGYXPDTTQVLCDVDEEEKKQRLSGHSQKLAIAYALIHTSQGSPVR 514
Query: 553 VMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
+++NLR+C DCH+ KLIS + REI +RD +RFHHFKDG CSCRDYW
Sbjct: 515 IVRNLRMCNDCHTYTKLISIIFDREITVRDRHRFHHFKDGACSCRDYW 562
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 117/268 (43%), Gaps = 23/268 (8%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV----VSWTVMLGGFIRDSRIDDA 56
M E + M+RG+V++ EA + +M E+ V ++ +L R +++
Sbjct: 48 MDEPGSFZFNTMMRGHVKDMNTEEALITYKEMAERGVKPDNFTYPTLLKACARLPAVEEG 107
Query: 57 RR----LFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+ + + E DV Q +++ Y + G + +F++M +++V SW+ +I+ + +
Sbjct: 108 MQVHAHILKLGLENDVFVQNSLISMYGKCGEIGVCCAVFEQMNERSVASWSALITAHASL 167
Query: 113 NRIDVARKLFEVMPEKNEVSWTA------------MLMGYTQCGRIQDAWELFKAMPMKS 160
+L M NE W A +G GR + L + + +
Sbjct: 168 GMWSDCLRLLGDMS--NEGYWRAEESILVSVLSACTHLGALDLGRSVHGF-LLRNVSGLN 224
Query: 161 VVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQK 220
V+ S+I + G + K +F +M +K+ ++S MI GY E + +FT M +
Sbjct: 225 VIVETSLIEMYLKCGXLYKGMCLFQKMAKKNKLSYSVMISGLAMHGYGREGLRIFTEMLE 284
Query: 221 EGVRVNFPSLISVLSVCASLASLDHGRQ 248
+G+ + + VL+ C+ + G Q
Sbjct: 285 QGLEPDDIVYVGVLNACSHAGLVQEGLQ 312
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 103/223 (46%), Gaps = 25/223 (11%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTL--------FWQMPEKNVVSWTVMLGGFIRDSR 52
M ER+V SW+A++ + GM ++ L +W+ E +VS +L
Sbjct: 149 MNERSVASWSALITAHASLGMWSDCLRLLGDMSNEGYWRAEESILVS---VLSACTHLGA 205
Query: 53 IDDARRLFDMMPEK----DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISG 108
+D R + + +V+ +T+++ Y + G + +G +F +M KKN +S++ MISG
Sbjct: 206 LDLGRSVHGFLLRNVSGLNVIVETSLIEMYLKCGXLYKGMCLFQKMAKKNKLSYSVMISG 265
Query: 109 YVNNNRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAMPMK----- 159
+ ++F M E+ +++ + +L + G +Q+ + F M ++
Sbjct: 266 LAMHGYGREGLRIFTEMLEQGLEPDDIVYVGVLNACSHAGLVQEGLQCFNRMKLEHGIEP 325
Query: 160 SVVASNSMILGLGQNGEVQKARVVFDQM-REKDDATWSGMIKV 201
++ M+ +G+ G++ +A + M E +D W ++
Sbjct: 326 TIQHYGCMVDLMGRAGKIDEALELIKSMPMEPNDVLWRSLLSA 368
>gi|15235537|ref|NP_195454.1| Tetratricopeptide repeat (TPR)-like superfamily protein
[Arabidopsis thaliana]
gi|75213666|sp|Q9SZT8.1|PP354_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g37380, chloroplastic; Flags: Precursor
gi|4468804|emb|CAB38205.1| putative protein [Arabidopsis thaliana]
gi|7270720|emb|CAB80403.1| putative protein [Arabidopsis thaliana]
gi|332661386|gb|AEE86786.1| Tetratricopeptide repeat (TPR)-like superfamily protein
[Arabidopsis thaliana]
Length = 632
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 217/589 (36%), Positives = 338/589 (57%), Gaps = 30/589 (5%)
Query: 14 RGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTN 73
R Y G I + LF Q + ++ +T + + D A L+ + ++
Sbjct: 72 RAYASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEF 131
Query: 74 MVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSW 133
+ G+ I +V+ + I YV +DV
Sbjct: 132 TFSSLLKSCSTKSGKLI-----HTHVLKFGLGIDPYVATGLVDV---------------- 170
Query: 134 TAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDA 193
Y + G + A ++F MP +S+V+S +MI + G V+ AR +FD M E+D
Sbjct: 171 ------YAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIV 224
Query: 194 TWSGMIKVYERKGYELEVIDLFTLMQKEG-VRVNFPSLISVLSVCASLASLDHGRQVHAQ 252
+W+ MI Y + G+ + + LF + EG + + ++++ LS C+ + +L+ GR +H
Sbjct: 225 SWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVF 284
Query: 253 LVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKS 312
+ + ++V V + LI MY KCG L + L+F++ KDIV WN++I+GYA +G + +
Sbjct: 285 VKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDA 344
Query: 313 LKVFHEMFS-SGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMV 371
L++F+EM +G+ P D+T +G L AC++ G V EG IFESM +Y ++PK EHY C+V
Sbjct: 345 LRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLV 404
Query: 372 DLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAG 431
LLGRAGQ++ A + I+ M + D+++W S+LG+C+ H L + A+ L+ L KN+G
Sbjct: 405 SLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSG 464
Query: 432 PYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHP 491
Y+LLSNIYAS G + VA++R M+++ ++K PG S IE+E KVH F D H +
Sbjct: 465 IYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGISTIEIENKVHEFRAGD-REHSKSK 523
Query: 492 MIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPI 551
I ML KI ++ GY P+++ VL D++E EK SL+ HSE+LA+AYGL+ G P+
Sbjct: 524 EIYTMLRKISERIKSHGYVPNTNTVLQDLEETEKEQSLQVHSERLAIAYGLISTKPGSPL 583
Query: 552 RVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
++ KNLRVC DCH+ KLISK+ GR+I++RD NRFHHF DG CSC D+W
Sbjct: 584 KIFKNLRVCSDCHTVTKLISKITGRKIVMRDRNRFHHFTDGSCSCGDFW 632
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 88/341 (25%), Positives = 158/341 (46%), Gaps = 31/341 (9%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVV 69
T +V Y + G + A +F +MPE+++VS T M+ + + ++ AR LFD M E+D+V
Sbjct: 165 TGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIV 224
Query: 70 AQTNMVLGYCQDGRVDEGREIFDEM-----PKKNVISWTTMISGYVNNNRIDVARKLFEV 124
+ M+ GY Q G ++ +F ++ PK + I+ +S ++ R +
Sbjct: 225 SWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVF 284
Query: 125 MPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKA 180
+ N T ++ Y++CG +++A +F P K +VA N+MI G +G Q A
Sbjct: 285 VKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDA 344
Query: 181 RVVFDQMR-----EKDDATWSGMIKVYERKGYELEVIDLFTLMQKE-GVRV---NFPSLI 231
+F++M+ + D T+ G ++ G E I +F M +E G++ ++ L+
Sbjct: 345 LRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLV 404
Query: 232 SVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGK-----LIFD 286
S+L L ++ + + D D + S ++ G+ V GK LI
Sbjct: 405 SLLGRAGQL------KRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGL 458
Query: 287 NFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPD 327
N + I + S I YA G E KV + M G++ +
Sbjct: 459 NIKNSGIYVLLSNI--YASVGDYEGVAKVRNLMKEKGIVKE 497
>gi|356525712|ref|XP_003531467.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic-like [Glycine max]
Length = 691
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 213/563 (37%), Positives = 332/563 (58%), Gaps = 20/563 (3%)
Query: 53 IDDARRLFDMMP----EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISG 108
I +R+F+ M E D+ ++ + + G + + R++FDEMP+K+V SW TM+ G
Sbjct: 134 IRGVKRVFNYMINSGFEPDLYVMNRVLFMHVKCGLMLDARKLFDEMPEKDVASWMTMVGG 193
Query: 109 YVNNNRIDVARKLFEVM-PEKNE---VSWTAMLMGYTQCGRIQDAWELFKAMPMKSV--- 161
V+ A +LF M E N+ ++ M+ G +Q ++ + V
Sbjct: 194 LVDTGNFSEAFRLFLCMWKEFNDGRSRTFATMIRASAGLGLVQVGKQIHSCALKRGVGDD 253
Query: 162 -VASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQK 220
S ++I + G ++ A VFDQM EK W+ +I Y GY E + L+ M+
Sbjct: 254 HFVSCALIDMYSKCGSIEDAHCVFDQMPEKTTVGWNSIIASYALHGYSEEALSLYFEMRD 313
Query: 221 EGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVK 280
G V+ ++ V+ +CA LASL+H +Q HA LVR F D+ + L+ Y K G +
Sbjct: 314 SGTTVDHFTISIVIRICARLASLEHAKQAHAALVRHGFATDIVANTALVDFYSKWGRMED 373
Query: 281 GKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSY 340
+ +F+ K+++ WN++I+GY +G G++++++F +M GV P VT + VLSACSY
Sbjct: 374 ARHVFNRMRHKNVISWNALIAGYGNHGQGQEAVEMFEQMLQEGVTPTHVTFLAVLSACSY 433
Query: 341 TGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWG 400
+G + G EIF SMK + V+P+ HYACM++LLGR +++A LI PF+P A +W
Sbjct: 434 SGLSQRGWEIFYSMKRDHKVKPRAMHYACMIELLGRESLLDEAYALIRTAPFKPTANMWA 493
Query: 401 SLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRN 460
+LL ACR H L+L ++AA+KL +EP+ YI+L N+Y S G+ + A + + ++K+
Sbjct: 494 ALLTACRMHKNLELGKLAAEKLYGMEPEKLCNYIVLLNLYNSSGKLKEAAGILQTLKKKG 553
Query: 461 VIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLRE---AGYCPDSSFVL 517
+ P CSW+EV+K+ + F D H + +K+ L+ E GY ++ +L
Sbjct: 554 LRMLPACSWVEVKKQPYAFLCGD----KSHSQTKEIYQKVDNLMVEICKHGYAEENETLL 609
Query: 518 HDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGRE 577
DVDEEE+ L+YHSEKLA+A+GL+ P P+++ + RVCGDCHSAIKLI+ V GRE
Sbjct: 610 PDVDEEEQ-RILKYHSEKLAIAFGLINTPHWTPLQITQGHRVCGDCHSAIKLIAMVTGRE 668
Query: 578 IILRDANRFHHFKDGLCSCRDYW 600
I++RDA+RFHHF++G CSC DYW
Sbjct: 669 IVVRDASRFHHFRNGSCSCGDYW 691
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 118/270 (43%), Gaps = 47/270 (17%)
Query: 16 YVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEK--------- 66
+V+ G++ +A LF +MPEK+V SW M+GG + +A RLF M ++
Sbjct: 163 HVKCGLMLDARKLFDEMPEKDVASWMTMVGGLVDTGNFSEAFRLFLCMWKEFNDGRSRTF 222
Query: 67 ------------------------------DVVAQTNMVLGYCQDGRVDEGREIFDEMPK 96
D ++ Y + G +++ +FD+MP+
Sbjct: 223 ATMIRASAGLGLVQVGKQIHSCALKRGVGDDHFVSCALIDMYSKCGSIEDAHCVFDQMPE 282
Query: 97 KNVISWTTMISGYVNNNRIDVARKL-FEVMPEKNEVSWTAMLMGYTQCGRI-------QD 148
K + W ++I+ Y + + A L FE+ V + + C R+ Q
Sbjct: 283 KTTVGWNSIIASYALHGYSEEALSLYFEMRDSGTTVDHFTISIVIRICARLASLEHAKQA 342
Query: 149 AWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYE 208
L + +VA+ +++ + G ++ AR VF++MR K+ +W+ +I Y G
Sbjct: 343 HAALVRHGFATDIVANTALVDFYSKWGRMEDARHVFNRMRHKNVISWNALIAGYGNHGQG 402
Query: 209 LEVIDLFTLMQKEGVRVNFPSLISVLSVCA 238
E +++F M +EGV + ++VLS C+
Sbjct: 403 QEAVEMFEQMLQEGVTPTHVTFLAVLSACS 432
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 92/179 (51%), Gaps = 12/179 (6%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVV----SWTVMLGGFIRDSRIDDA 56
MPE+ V W +++ Y G EA +L+++M + + ++++ R + ++ A
Sbjct: 280 MPEKTTVGWNSIIASYALHGYSEEALSLYFEMRDSGTTVDHFTISIVIRICARLASLEHA 339
Query: 57 RRLFDMMPE----KDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
++ + D+VA T +V Y + GR+++ R +F+ M KNVISW +I+GY N+
Sbjct: 340 KQAHAALVRHGFATDIVANTALVDFYSKWGRMEDARHVFNRMRHKNVISWNALIAGYGNH 399
Query: 113 NRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSM 167
+ A ++FE M ++ V++ A+L + G Q WE+F +M V +M
Sbjct: 400 GQGQEAVEMFEQMLQEGVTPTHVTFLAVLSACSYSGLSQRGWEIFYSMKRDHKVKPRAM 458
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/293 (21%), Positives = 125/293 (42%), Gaps = 44/293 (15%)
Query: 210 EVIDLFTLMQKE--GVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASV 267
E ++LF +++ E G V + +++S C L S+ ++V ++ F+ D+YV +
Sbjct: 99 EAMELFEILELEHDGYGVGASTYDALVSACVGLRSIRGVKRVFNYMINSGFEPDLYVMNR 158
Query: 268 LITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPD 327
++ M++KCG ++ + +FD KD+ W +++ G G ++ ++F M+
Sbjct: 159 VLFMHVKCGLMLDARKLFDEMPEKDVASWMTMVGGLVDTGNFSEAFRLFLCMWKEFNDGR 218
Query: 328 DVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHY-AC-MVDLLGRAGQVEDAMK 385
T ++ A + G V+ G++I + + + +H+ +C ++D+ + G +EDA
Sbjct: 219 SRTFATMIRASAGLGLVQVGKQIHSCALKRGVGD---DHFVSCALIDMYSKCGSIEDAHC 275
Query: 386 LIEAMPFEPDAIIWGSLL----------------------GACRTHMKLDLAEVAAKKLL 423
+ + MP E + W S++ G H + + +L
Sbjct: 276 VFDQMP-EKTTVGWNSIIASYALHGYSEEALSLYFEMRDSGTTVDHFTISIVIRICARLA 334
Query: 424 QLEPKNAGPYIL--------------LSNIYASQGRFHDVAELRKNMRKRNVI 462
LE L L + Y+ GR D + MR +NVI
Sbjct: 335 SLEHAKQAHAALVRHGFATDIVANTALVDFYSKWGRMEDARHVFNRMRHKNVI 387
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 71/160 (44%), Gaps = 14/160 (8%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMP 64
++V+ TA+V Y + G + +A +F +M KNV+SW ++ G+ + +A +F+ M
Sbjct: 354 DIVANTALVDFYSKWGRMEDARHVFNRMRHKNVISWNALIAGYGNHGQGQEAVEMFEQML 413
Query: 65 EKDVVAQTNM---VLGYCQ-DGRVDEGREIF-----DEMPKKNVISWTTMISGYVNNNRI 115
++ V VL C G G EIF D K + + MI + +
Sbjct: 414 QEGVTPTHVTFLAVLSACSYSGLSQRGWEIFYSMKRDHKVKPRAMHYACMIELLGRESLL 473
Query: 116 DVARKLFEVMPEKNEVS-WTAMLMGYTQCGRIQDAWELFK 154
D A L P K + W A+L T C R+ EL K
Sbjct: 474 DEAYALIRTAPFKPTANMWAALL---TAC-RMHKNLELGK 509
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 76/177 (42%), Gaps = 19/177 (10%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV----VSWTVMLGGFIRDSRIDDA 56
M +NV+SW A++ GY G EA +F QM ++ V V++ +L
Sbjct: 381 MRHKNVISWNALIAGYGNHGQGQEAVEMFEQMLQEGVTPTHVTFLAVLSACSYSGLSQRG 440
Query: 57 RRLFDMMPEKDVVAQTNM-------VLGYCQDGRVDEGREIFDEMPKKNVIS-WTTMISG 108
+F M V M +LG ++ +DE + P K + W +++
Sbjct: 441 WEIFYSMKRDHKVKPRAMHYACMIELLG--RESLLDEAYALIRTAPFKPTANMWAALLTA 498
Query: 109 YVNNNRIDV----ARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSV 161
+ +++ A KL+ + PEK ++ +L Y G++++A + + + K +
Sbjct: 499 CRMHKNLELGKLAAEKLYGMEPEK-LCNYIVLLNLYNSSGKLKEAAGILQTLKKKGL 554
>gi|356546516|ref|XP_003541672.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 591
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 212/520 (40%), Positives = 321/520 (61%), Gaps = 11/520 (2%)
Query: 90 IFDEMPKKNVISWTTMISGYVNNNRIDVA----RKLFEVMPEKNEVSWTAMLMGYTQCGR 145
+F + NV +W T+I GY ++ A R++ E + ++ +L ++
Sbjct: 74 VFTVIHNPNVFTWNTIIRGYAESDNPSPAFLFYRQMVVSCVEPDTHTYPFLLKAISKSLN 133
Query: 146 IQDAWELFKAMPMKS-----VVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIK 200
+++ E ++ +++ V NS++ G+ + A VF+ M+E+D W+ MI
Sbjct: 134 VREG-EAIHSVTIRNGFESLVFVQNSLLHIYAACGDTESAYKVFELMKERDLVAWNSMIN 192
Query: 201 VYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDV 260
+ G E + LF M EGV + +++S+LS A L +L+ GR+VH L++
Sbjct: 193 GFALNGRPNEALTLFREMSVEGVEPDGFTVVSLLSASAELGALELGRRVHVYLLKVGLSK 252
Query: 261 DVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMF 320
+ +V + L+ +Y KCG + + + +F + ++ V W S+I G A G GE++L++F EM
Sbjct: 253 NSHVTNSLLDLYAKCGAIREAQRVFSEMSERNAVSWTSLIVGLAVNGFGEEALELFKEME 312
Query: 321 SSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQV 380
G++P ++T VGVL ACS+ G + EG E F MK + + P+ EHY CMVDLL RAG V
Sbjct: 313 GQGLVPSEITFVGVLYACSHCGMLDEGFEYFRRMKEECGIIPRIEHYGCMVDLLSRAGLV 372
Query: 381 EDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIY 440
+ A + I+ MP +P+A+IW +LLGAC H L L E+A LL LEPK++G Y+LLSN+Y
Sbjct: 373 KQAYEYIQNMPVQPNAVIWRTLLGACTIHGHLGLGEIARSHLLNLEPKHSGDYVLLSNLY 432
Query: 441 ASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKI 500
AS+ R+ DV +R++M K V K PG S +E+ +V+ FT D SHP+ + +LEKI
Sbjct: 433 ASERRWSDVQVIRRSMLKDGVKKTPGYSLVELGNRVYEFTMGD-RSHPQSQDVYALLEKI 491
Query: 501 GGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVC 560
LL+ GY P ++ VL D++EEEK +L YHSEK+A+A+ L+ P G PIRVMKNLRVC
Sbjct: 492 TELLKLEGYVPHTANVLADIEEEEKEQALSYHSEKVAIAFMLLNTPPGTPIRVMKNLRVC 551
Query: 561 GDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
DCH AIKLI+K+ REI++RD +RFHHF+ G CSC+DYW
Sbjct: 552 ADCHMAIKLIAKIYDREIVIRDRSRFHHFRGGSCSCKDYW 591
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 68/328 (20%), Positives = 148/328 (45%), Gaps = 23/328 (7%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQMP----EKNVVSWTVMLGGFIRDSRIDDARRLF 60
NV +W ++RGY E + A + QM E + ++ +L + + + +
Sbjct: 82 NVFTWNTIIRGYAESDNPSPAFLFYRQMVVSCVEPDTHTYPFLLKAISKSLNVREGEAIH 141
Query: 61 DMMP----EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRID 116
+ E V Q +++ Y G + ++F+ M ++++++W +MI+G+ N R +
Sbjct: 142 SVTIRNGFESLVFVQNSLLHIYAACGDTESAYKVFELMKERDLVAWNSMINGFALNGRPN 201
Query: 117 VARKLFEVMP----EKNEVSWTAML-----MGYTQCGRIQDAWELFKAMPMKSVVASNSM 167
A LF M E + + ++L +G + GR + L K K+ +NS+
Sbjct: 202 EALTLFREMSVEGVEPDGFTVVSLLSASAELGALELGRRVHVY-LLKVGLSKNSHVTNSL 260
Query: 168 ILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNF 227
+ + G +++A+ VF +M E++ +W+ +I G+ E ++LF M+ +G+ +
Sbjct: 261 LDLYAKCGAIREAQRVFSEMSERNAVSWTSLIVGLAVNGFGEEALELFKEMEGQGLVPSE 320
Query: 228 PSLISVLSVCASLASLDHGRQVHAQLV-RCQFDVDVYVASVLITMYIKCGELVKGKLIFD 286
+ + VL C+ LD G + ++ C + ++ + + G + +
Sbjct: 321 ITFVGVLYACSHCGMLDEGFEYFRRMKEECGIIPRIEHYGCMVDLLSRAGLVKQAYEYIQ 380
Query: 287 NFASK-DIVMWNSIISG---YAQYGLGE 310
N + + V+W +++ + GLGE
Sbjct: 381 NMPVQPNAVIWRTLLGACTIHGHLGLGE 408
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 84/168 (50%), Gaps = 12/168 (7%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMP----EKNVVSWTVMLGGFIRDSRIDDA 56
M ER++V+W +M+ G+ G EA TLF +M E + + +L ++
Sbjct: 179 MKERDLVAWNSMINGFALNGRPNEALTLFREMSVEGVEPDGFTVVSLLSASAELGALELG 238
Query: 57 RR----LFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
RR L + K+ +++ Y + G + E + +F EM ++N +SWT++I G N
Sbjct: 239 RRVHVYLLKVGLSKNSHVTNSLLDLYAKCGAIREAQRVFSEMSERNAVSWTSLIVGLAVN 298
Query: 113 NRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAM 156
+ A +LF+ M + +E+++ +L + CG + + +E F+ M
Sbjct: 299 GFGEEALELFKEMEGQGLVPSEITFVGVLYACSHCGMLDEGFEYFRRM 346
>gi|147856409|emb|CAN80331.1| hypothetical protein VITISV_018275 [Vitis vinifera]
Length = 681
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 237/639 (37%), Positives = 361/639 (56%), Gaps = 53/639 (8%)
Query: 12 MVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMM------PE 65
+V Y + G + A LF MP++N+VSWT M+ G ++S+ +A R F M P
Sbjct: 46 LVNMYSKCGELDHALKLFDTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPT 105
Query: 66 KDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISG----YVNNNRIDVARKL 121
+ A ++ + G ++ G+++ K + S + S Y + A K+
Sbjct: 106 Q--FAFSSAIRACASLGSIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKV 163
Query: 122 FEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVV------------------- 162
FE MP K+EVSWTAM+ GY++ G ++A FK M + V
Sbjct: 164 FEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKAC 223
Query: 163 ----ASNSMILGLG----------------QNGEVQKARVVFDQMRE-KDDATWSGMIKV 201
+ +S ++ LG + G+++ A VF E ++ +++ +I
Sbjct: 224 KFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDG 283
Query: 202 YERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVD 261
Y + + +F ++++G+ N + S++ CA+ A+L+ G Q+HAQ+++ FD D
Sbjct: 284 YVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDED 343
Query: 262 VYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFS 321
+V+S+L+ MY KCG L FD + WNS++S + Q+GLG+ ++K F M
Sbjct: 344 PFVSSILVDMYGKCGLLEHAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKFFERMVD 403
Query: 322 SGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVE 381
GV P+ +T + +L+ CS+ G V+EG + F SM Y V P EHY+C++DLLGRAG+++
Sbjct: 404 RGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLK 463
Query: 382 DAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYA 441
+A + I MPFEP+A W S LGACR H ++ ++AA+KL++LEPKN+G +LLSNIYA
Sbjct: 464 EAKEFINRMPFEPNAFGWCSFLGACRIHGDKEMGKLAAEKLVKLEPKNSGALVLLSNIYA 523
Query: 442 SQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIG 501
++ ++ DV +R MR NV K PG SW++V K H+F D SH I L+ +
Sbjct: 524 NERQWEDVRSVRMRMRDGNVKKLPGYSWVDVGYKTHVFGAED-WSHXRKSAIYEKLDXLL 582
Query: 502 GLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCG 561
++ AGY P + V D+D+ K L HSE++AVA+ L+ +P G PI V KNLRVC
Sbjct: 583 DQIKAAGYVPXTDSVPLDMDDXMKEKLLHRHSERIAVAFALISMPIGKPIIVKKNLRVCV 642
Query: 562 DCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
DCHSAIK ISKV GR+II+RD +RFHHF DG CSC DYW
Sbjct: 643 DCHSAIKFISKVTGRKIIVRDNSRFHHFTDGSCSCGDYW 681
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 96/352 (27%), Positives = 176/352 (50%), Gaps = 21/352 (5%)
Query: 72 TNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEV 131
++V Y + G +D ++FD MP++N++SWT MISG N++ A + F M EV
Sbjct: 44 NHLVNMYSKCGELDHALKLFDTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEV 103
Query: 132 ----SWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQN--------GEVQK 179
++++ + G I+ ++ + +K + S L +G N G +
Sbjct: 104 PTQFAFSSAIRACASLGSIEMGKQM-HCLALKFGIGSE---LFVGSNLEDMYSKCGAMFD 159
Query: 180 ARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCAS 239
A VF++M KD+ +W+ MI Y + G E + F M E V ++ L S L C +
Sbjct: 160 ACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGA 219
Query: 240 LASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFD-NFASKDIVMWNS 298
L + GR VH+ +V+ F+ D++V + L MY K G++ +F + +++V +
Sbjct: 220 LKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTC 279
Query: 299 IISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIF-ESMKSK 357
+I GY + EK L VF E+ G+ P++ T ++ AC+ +++G ++ + MK
Sbjct: 280 LIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKIN 339
Query: 358 YLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTH 409
+ +P + +VD+ G+ G +E A++ + + +P I W SL+ H
Sbjct: 340 FDEDPFVS--SILVDMYGKCGLLEHAIQAFDEIG-DPTEIAWNSLVSVFGQH 388
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 119/284 (41%), Gaps = 34/284 (11%)
Query: 164 SNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGV 223
+N ++ + GE+ A +FD M +++ +W+ MI + E I F M+ G
Sbjct: 43 TNHLVNMYSKCGELDHALKLFDTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGE 102
Query: 224 RVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKL 283
+ S + CASL S++ G+Q+H ++ +++V S L MY KCG +
Sbjct: 103 VPTQFAFSSAIRACASLGSIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACK 162
Query: 284 IFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGK 343
+F+ KD V W ++I GY++ G E++L F +M V D L L AC
Sbjct: 163 VFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKA 222
Query: 344 VKEGREI----------------------------FESMKSKYLVEPKTEH---YACMVD 372
K GR + ES + + ++ + + Y C++D
Sbjct: 223 CKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLID 282
Query: 373 LLGRAGQVEDAMKL---IEAMPFEPDAIIWGSLLGACRTHMKLD 413
Q+E + + + EP+ + SL+ AC L+
Sbjct: 283 GYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALE 326
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 98/198 (49%), Gaps = 2/198 (1%)
Query: 229 SLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNF 288
+L V+ A L G+Q+HA L+ + ++ + L+ MY KCGEL +FD
Sbjct: 7 ALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTM 66
Query: 289 ASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGR 348
+++V W ++ISG +Q ++++ F M G +P + AC+ G ++ G+
Sbjct: 67 PQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGK 126
Query: 349 EIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRT 408
++ + K+ + + + + D+ + G + DA K+ E MP + D + W +++
Sbjct: 127 QM-HCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCK-DEVSWTAMIDGYSK 184
Query: 409 HMKLDLAEVAAKKLLQLE 426
+ + A +A KK++ E
Sbjct: 185 IGEFEEALLAFKKMIDEE 202
>gi|357502521|ref|XP_003621549.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87241485|gb|ABD33343.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355496564|gb|AES77767.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 654
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 228/615 (37%), Positives = 346/615 (56%), Gaps = 35/615 (5%)
Query: 12 MVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDA----RRLFDMMPEKD 67
+++ G + +A L P ++ +++ I + + D RL ++D
Sbjct: 49 LIQSLCRGGNLKQAVQLLCCEPNPTKKTFELLINSCIEQNSLSDGVDVHHRLVGSGLDQD 108
Query: 68 VVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPE 127
T ++ YC G VD ++FDE +K + W + +R L + +
Sbjct: 109 PYLATKLINMYCDLGSVDHACKVFDETREKTIFVWNAIFRALAMASR---GEDLLVLYGQ 165
Query: 128 KNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQ--------- 178
N + + YT + EL P++ ++ IL G G V
Sbjct: 166 MNWIGIPSNRFTYTYVLKACVVSEL-SICPLRKGKEIHAHILRHGYEGHVHVMTTLLDVY 224
Query: 179 -------KARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRV--NFPS 229
A VF M +K+ +WS MI Y + ++ ++LF +M E N +
Sbjct: 225 ARFGYVSYASSVFGAMPDKNIVSWSAMIACYAKNEMPMKALELFQIMMLEACDTVPNPIT 284
Query: 230 LISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFA 289
++SVL CASLA+L+HG+ VHA ++R D + V + LITMY +CGE+ G+ +FD
Sbjct: 285 MVSVLQACASLAALEHGKLVHAYVLRRGLDSTLPVLNTLITMYGRCGEISTGQRVFDYMK 344
Query: 290 SKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGRE 349
+D++ WNS+IS Y +GLG+K++++F M + GV P +T + VL ACS+ G V+E +
Sbjct: 345 KRDVISWNSLISIYGMHGLGKKAIQIFENMINRGVSPSYITFITVLCACSHAGLVEEAKI 404
Query: 350 IFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTH 409
+FESM +KY + P+ EHYACMVD+LGRA ++++A++LI+ M F+P +WGSLLG+CR H
Sbjct: 405 LFESMLNKYRIHPRMEHYACMVDILGRANRLDEAIELIQNMDFKPGPTVWGSLLGSCRIH 464
Query: 410 MKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSW 469
++LAE A+ L +LEPKNAG Y+LLS+IYA ++DV +RK + R + K P CSW
Sbjct: 465 CNVELAERASAMLFELEPKNAGNYVLLSHIYAKSRMWNDVRRVRKQLESRGLQKIPSCSW 524
Query: 470 IEVEKKVHMFTGRDCVSHPEH-PMIMRMLEKIGGLLRE---AGYCPDSSFVLHDVDEEEK 525
IEV++K++ VS E+ P I + + LL E GY P ++ V +D+DEEEK
Sbjct: 525 IEVKRKIYSL-----VSIEEYNPQIEELCAFLITLLTEIKNQGYVPQTNVVTYDLDEEEK 579
Query: 526 VHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANR 585
+ HS KLAVA+GL+ +G IR+ NLR+C DCH+ +K +SK REI+LRD NR
Sbjct: 580 ERIVLGHSGKLAVAFGLINTSKGEIIRISNNLRLCEDCHAFMKFVSKFTNREILLRDVNR 639
Query: 586 FHHFKDGLCSCRDYW 600
FH FKDG+CSC DYW
Sbjct: 640 FHCFKDGVCSCGDYW 654
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 97/202 (48%), Gaps = 14/202 (6%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDM 62
E +V T ++ Y G ++ A ++F MP+KN+VSW+ M+ + ++ A LF +
Sbjct: 211 EGHVHVMTTLLDVYARFGYVSYASSVFGAMPDKNIVSWSAMIACYAKNEMPMKALELFQI 270
Query: 63 MPEKDVVAQTN-----MVLGYCQD-GRVDEGREIFDEMPKKNVIS----WTTMISGYVNN 112
M + N VL C ++ G+ + + ++ + S T+I+ Y
Sbjct: 271 MMLEACDTVPNPITMVSVLQACASLAALEHGKLVHAYVLRRGLDSTLPVLNTLITMYGRC 330
Query: 113 NRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASN----SMI 168
I +++F+ M +++ +SW +++ Y G + A ++F+ M + V S +++
Sbjct: 331 GEISTGQRVFDYMKKRDVISWNSLISIYGMHGLGKKAIQIFENMINRGVSPSYITFITVL 390
Query: 169 LGLGQNGEVQKARVVFDQMREK 190
G V++A+++F+ M K
Sbjct: 391 CACSHAGLVEEAKILFESMLNK 412
>gi|224061246|ref|XP_002300388.1| predicted protein [Populus trichocarpa]
gi|222847646|gb|EEE85193.1| predicted protein [Populus trichocarpa]
Length = 514
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 217/516 (42%), Positives = 313/516 (60%), Gaps = 9/516 (1%)
Query: 90 IFDEMPKKNVISWTTM----ISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMG-YTQCG 144
+FD +P S+ +S VN I LF+ + + + M++ Y CG
Sbjct: 3 LFDVLPDTFTCSFVLKACLKLSDVVNGKTI---HGLFQKLGFGSNLFLQNMILNLYGLCG 59
Query: 145 RIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYER 204
+ DA LF+ MP + V N +I L + G++ A F +M K+ +W+ MI + +
Sbjct: 60 EMGDAMLLFEKMPQRDAVTWNIVIAQLAKRGDIDGAYGFFLRMPNKNVRSWTSMISGFVQ 119
Query: 205 KGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYV 264
G E IDLF ++ E VR N +++SVL+ CA L LD GR VH + F +V+V
Sbjct: 120 CGKPNEAIDLFMKLEDEAVRPNEVTVVSVLAACADLGDLDLGRIVHEYSTKSGFKRNVHV 179
Query: 265 ASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGV 324
+ LI MY+KCG L + +F + +V W+++I+G A +G E++L +F EM GV
Sbjct: 180 CNTLIDMYVKCGCLENARRVFYEMEERTVVSWSAMIAGLAMHGQAEEALCLFSEMIKLGV 239
Query: 325 MPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAM 384
P+ VT +G+L ACS+ G + EGR F SM + Y V P+ EHY C+VDL RAG +E+A
Sbjct: 240 KPNGVTFIGLLHACSHMGLIDEGRRFFASMTADYGVIPQIEHYGCVVDLFSRAGLLEEAH 299
Query: 385 KLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQG 444
+ I +MP +P+ ++WG+LLG C+ H +DLAE A K L +L+P N G Y+++SNIYA
Sbjct: 300 EFILSMPIKPNGVVWGALLGGCKVHKNIDLAEEAIKHLSELDPLNDGYYVVISNIYAEAE 359
Query: 445 RFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLL 504
R+ D A +RK M+ R V K G S I V VH F D +HP+ I ++ +K+ +
Sbjct: 360 RWEDAARVRKLMKDRGVKKTSGWSSITVNGVVHEFVAGD-QTHPQAEDICKIWDKLLVKM 418
Query: 505 REAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCH 564
+ GY P +S VL D++E+EK L HSEKLAV +GL+ PEG PIR+MKNLRVC DCH
Sbjct: 419 KRRGYAPKTSVVLLDMEEKEKEKFLYRHSEKLAVVFGLMTTPEGTPIRIMKNLRVCEDCH 478
Query: 565 SAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
+A+K+IS ++ REII+RD NRFH F+DG CSCRD+W
Sbjct: 479 AALKIISGIVSREIIVRDRNRFHCFRDGQCSCRDFW 514
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 135/280 (48%), Gaps = 17/280 (6%)
Query: 55 DARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVN--- 111
DA LF+ MP++D V ++ + G +D F MP KNV SWT+MISG+V
Sbjct: 63 DAMLLFEKMPQRDAVTWNIVIAQLAKRGDIDGAYGFFLRMPNKNVRSWTSMISGFVQCGK 122
Query: 112 -NNRIDVARKLFEVMPEKNEVSWTAML-----MGYTQCGRIQDAWELFKAMPMKSVVASN 165
N ID+ KL + NEV+ ++L +G GRI + K+ ++V N
Sbjct: 123 PNEAIDLFMKLEDEAVRPNEVTVVSVLAACADLGDLDLGRIVHEYST-KSGFKRNVHVCN 181
Query: 166 SMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRV 225
++I + G ++ AR VF +M E+ +WS MI G E + LF+ M K GV+
Sbjct: 182 TLIDMYVKCGCLENARRVFYEMEERTVVSWSAMIAGLAMHGQAEEALCLFSEMIKLGVKP 241
Query: 226 NFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDV--DVYVASVLITMYIKCGELVKG-K 282
N + I +L C+ + +D GR+ A + + V + ++ ++ + G L + +
Sbjct: 242 NGVTFIGLLHACSHMGLIDEGRRFFASMT-ADYGVIPQIEHYGCVVDLFSRAGLLEEAHE 300
Query: 283 LIFDNFASKDIVMWNSIISG---YAQYGLGEKSLKVFHEM 319
I + V+W +++ G + L E+++K E+
Sbjct: 301 FILSMPIKPNGVVWGALLGGCKVHKNIDLAEEAIKHLSEL 340
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/229 (31%), Positives = 109/229 (47%), Gaps = 22/229 (9%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MP+R+ V+W ++ + G I A F +MP KNV SWT M+ GF++ + ++A LF
Sbjct: 71 MPQRDAVTWNIVIAQLAKRGDIDGAYGFFLRMPNKNVRSWTSMISGFVQCGKPNEAIDLF 130
Query: 61 DMMPEKDVVAQTNM----VLGYCQD-GRVDEGREIFDEMP----KKNVISWTTMISGYVN 111
M E + V + VL C D G +D GR + + K+NV T+I YV
Sbjct: 131 -MKLEDEAVRPNEVTVVSVLAACADLGDLDLGRIVHEYSTKSGFKRNVHVCNTLIDMYVK 189
Query: 112 NNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGL 171
++ AR++F M E+ VSW+AM+ G G+ ++A LF M V + +GL
Sbjct: 190 CGCLENARRVFYEMEERTVVSWSAMIAGLAMHGQAEEALCLFSEMIKLGVKPNGVTFIGL 249
Query: 172 ----GQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFT 216
G + + R F M G+I E G V+DLF+
Sbjct: 250 LHACSHMGLIDEGRRFFASMTAD-----YGVIPQIEHYGC---VVDLFS 290
>gi|357165485|ref|XP_003580399.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 886
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 222/648 (34%), Positives = 355/648 (54%), Gaps = 60/648 (9%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV----VSWTVMLGGFIRDSRIDDA 56
MPER+VVSW ++ + G + EA + M K V ++T L R S ++
Sbjct: 251 MPERDVVSWNMVISALSKSGRVREALDMVVDMHGKGVRPDSTTYTSSLTACARLSSLEWG 310
Query: 57 RRL----FDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
++L +P D + MV Y + G E + +F + +N +SWT +I G++
Sbjct: 311 KQLHVQVIRNLPHIDPYVASAMVELYAKCGCFKEAKRVFSSLRDRNSVSWTVLIGGFLQY 370
Query: 113 NRIDVARKLFEVMPEK----NEVSWTAMLMG----------------------------- 139
+ +LF M + ++ + ++ G
Sbjct: 371 GCFSESVELFNQMRAELMAVDQFALATLISGCCNTMDICLGSQLHSLCLKSGHTRAVVVS 430
Query: 140 ------YTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDA 193
Y +CG +Q+A +F M + +V+ MI Q G + KAR FD M ++
Sbjct: 431 NSLISMYAKCGNLQNAELIFNFMAERDIVSWTGMITAYSQVGNIAKAREFFDDMSTRNVI 490
Query: 194 TWSGMIKVYERKGYELEVIDLFT-LMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQ 252
TW+ M+ Y + G E + + +++ ++ ++ V ++ + +++ CA + + G Q+
Sbjct: 491 TWNAMLGAYIQHGAEEDGLKMYSDMLTEKDVIPDWVTYVTLFRGCADIGANKLGDQIIGH 550
Query: 253 LVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKS 312
V+ +D V + +ITMY KCG + + + FD + KD+V WN++I+GY+Q+G+G+++
Sbjct: 551 TVKVGLILDTSVVNAVITMYSKCGRISEARKAFDFLSRKDLVSWNAMITGYSQHGMGKQA 610
Query: 313 LKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVD 372
+++F ++ + G PD ++ V VLS CS++G V+EG+ F+ MK + + P EH++CMVD
Sbjct: 611 IEIFDDILNKGAKPDYISYVAVLSGCSHSGLVEEGKFYFDMMKRDHNISPGLEHFSCMVD 670
Query: 373 LLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGP 432
LLGRAG + +A LI+ MP +P A +WG+LL AC+TH DLAE+AAK L L+ +G
Sbjct: 671 LLGRAGHLIEAKNLIDEMPMKPTAEVWGALLSACKTHGNNDLAELAAKHLFDLDSPGSGG 730
Query: 433 YILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPM 492
Y+LL+ +YA G+ D A++RK MR + + K PG SW+EV +VH+F D VSHP+
Sbjct: 731 YMLLAKMYADAGKSDDSAQVRKLMRDKGIKKSPGYSWMEVNNRVHVFKAED-VSHPQVIA 789
Query: 493 IMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIR 552
I L+++ + GY E S +HSEKLAVA+G++ LP +PI
Sbjct: 790 IREKLDELMEKIAHLGYV-----------RTESPRSEIHHSEKLAVAFGIMSLPAWMPIH 838
Query: 553 VMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
+MKNLR+C DCH+ IKLIS V RE ++RD RFHHFK G CSC DYW
Sbjct: 839 IMKNLRICDDCHTVIKLISTVTDREFVIRDGVRFHHFKGGSCSCMDYW 886
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 103/412 (25%), Positives = 206/412 (50%), Gaps = 24/412 (5%)
Query: 10 TAMVRGYVEEGMITEAGTLFW-QMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDV 68
++ Y+ G +++A L ++ E NV++ +M+ G+ + + DA LF MP +DV
Sbjct: 64 NTLLHAYLSCGALSDARNLLRDEITEPNVITHNIMMNGYAKLGSLSDAVELFGRMPTRDV 123
Query: 69 VAQTNMVLGYCQDGRVDEGREIF-------DEMPKKNVISWTTMISGYVNNNRIDVARKL 121
+ ++ GY Q G+ +IF D +P N ++ ++ +VA +L
Sbjct: 124 ASWNTIMSGYYQSGQFLNALDIFVSMRQTGDSLP--NAFTFGCVMKSCGALGWHEVALQL 181
Query: 122 FEVMPEKNEVS----WTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEV 177
++ + + TA++ +CG + A + F + +++ NSM++G ++ V
Sbjct: 182 LGLLSKFDSQDDPDVQTALVDMLVRCGAMDFASKQFSRIKNPTIICRNSMLVGYAKSHGV 241
Query: 178 QKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVC 237
A +F M E+D +W+ +I + G E +D+ M +GVR + + S L+ C
Sbjct: 242 DHALEIFKSMPERDVVSWNMVISALSKSGRVREALDMVVDMHGKGVRPDSTTYTSSLTAC 301
Query: 238 ASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWN 297
A L+SL+ G+Q+H Q++R +D YVAS ++ +Y KCG + K +F + ++ V W
Sbjct: 302 ARLSSLEWGKQLHVQVIRNLPHIDPYVASAMVELYAKCGCFKEAKRVFSSLRDRNSVSWT 361
Query: 298 SIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREI----FES 353
+I G+ QYG +S+++F++M + + D L ++S C T + G ++ +S
Sbjct: 362 VLIGGFLQYGCFSESVELFNQMRAELMAVDQFALATLISGCCNTMDICLGSQLHSLCLKS 421
Query: 354 MKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
++ +V + ++ + + G +++A +LI E D + W ++ A
Sbjct: 422 GHTRAVVVSNS-----LISMYAKCGNLQNA-ELIFNFMAERDIVSWTGMITA 467
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 107/493 (21%), Positives = 217/493 (44%), Gaps = 90/493 (18%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKN-----------------VVSW--- 40
MP R+V SW ++ GY + G A +F M + + W
Sbjct: 118 MPTRDVASWNTIMSGYYQSGQFLNALDIFVSMRQTGDSLPNAFTFGCVMKSCGALGWHEV 177
Query: 41 --------------------TVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQ 80
T ++ +R +D A + F + ++ + +M++GY +
Sbjct: 178 ALQLLGLLSKFDSQDDPDVQTALVDMLVRCGAMDFASKQFSRIKNPTIICRNSMLVGYAK 237
Query: 81 DGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEK----NEVSWTAM 136
VD EIF MP+++V+SW +IS + R+ A + M K + ++T+
Sbjct: 238 SHGVDHALEIFKSMPERDVVSWNMVISALSKSGRVREALDMVVDMHGKGVRPDSTTYTSS 297
Query: 137 LMGYTQCGRIQD-AW------ELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMRE 189
L T C R+ W ++ + +P +++M+ + G ++A+ VF +R+
Sbjct: 298 L---TACARLSSLEWGKQLHVQVIRNLPHIDPYVASAMVELYAKCGCFKEAKRVFSSLRD 354
Query: 190 KDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQV 249
++ +W+ +I + + G E ++LF M+ E + V+ +L +++S C + + G Q+
Sbjct: 355 RNSVSWTVLIGGFLQYGCFSESVELFNQMRAELMAVDQFALATLISGCCNTMDICLGSQL 414
Query: 250 HAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLI------------------------- 284
H+ ++ V V++ LI+MY KCG L +LI
Sbjct: 415 HSLCLKSGHTRAVVVSNSLISMYAKCGNLQNAELIFNFMAERDIVSWTGMITAYSQVGNI 474
Query: 285 ------FDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFS-SGVMPDDVTLVGVLSA 337
FD+ ++++++ WN+++ Y Q+G E LK++ +M + V+PD VT V +
Sbjct: 475 AKAREFFDDMSTRNVITWNAMLGAYIQHGAEEDGLKMYSDMLTEKDVIPDWVTYVTLFRG 534
Query: 338 CSYTGKVKEGREIF-ESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDA 396
C+ G K G +I ++K +++ T ++ + + G++ +A K + + D
Sbjct: 535 CADIGANKLGDQIIGHTVKVGLILD--TSVVNAVITMYSKCGRISEARKAFDFLS-RKDL 591
Query: 397 IIWGSLLGACRTH 409
+ W +++ H
Sbjct: 592 VSWNAMITGYSQH 604
>gi|357480897|ref|XP_003610734.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512069|gb|AES93692.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 726
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 215/568 (37%), Positives = 334/568 (58%), Gaps = 9/568 (1%)
Query: 41 TVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMP----K 96
T ++ + RI DAR LFD M D VA ++ GYCQ+G D+ +F++M K
Sbjct: 160 TGLIAMYASCRRIMDARLLFDKMCHPDAVAWNMIIDGYCQNGHYDDALRLFEDMRSSDMK 219
Query: 97 KNVISWTTMISGYVNNNRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWEL 152
+ + T++S + + R + E + + + TA++ Y CG + A ++
Sbjct: 220 PDSVILCTVLSACGHAGNLSYGRTIHEFVKDNGYAIDSHLQTALINMYANCGAMDLARKI 279
Query: 153 FKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVI 212
+ + K ++ S +M+ G + G V+ AR +FDQM E+D WS MI Y E +
Sbjct: 280 YDGLSSKHLIVSTAMLSGYAKLGMVKDARFIFDQMIERDLVCWSAMISGYAESDQPQEAL 339
Query: 213 DLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMY 272
LF M ++ + +++SV+S C+ + +L +H + R F + V + LI MY
Sbjct: 340 KLFDEMLQKRSVPDQITMLSVISACSHVGALAQANWIHTYVDRSGFGRALSVNNALIDMY 399
Query: 273 IKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLV 332
KCG LVK + +F+N K+++ W+S+I+ +A +G + ++K+F M + P+ VT +
Sbjct: 400 AKCGNLVKAREVFENMPRKNVISWSSMINAFAMHGNADSAIKLFRRMKEVNIEPNGVTFI 459
Query: 333 GVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPF 392
GVL AC + G V+EG ++F SM +++ + P EHY CMVDL RA + A++LIE MPF
Sbjct: 460 GVLYACGHAGLVEEGEKLFSSMINEHGISPTREHYGCMVDLYCRANFLRKAIELIETMPF 519
Query: 393 EPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAEL 452
P+ IIWGSL+ AC+ H + +L E AAK+LL+LEP + G ++LSNIYA + R++DV +
Sbjct: 520 APNVIIWGSLMSACQVHGEAELGEFAAKRLLELEPDHDGALVVLSNIYAKEKRWNDVGLI 579
Query: 453 RKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPD 512
RK+M + + K S IE+ +VHMF D H + I L+++ L+ GY P
Sbjct: 580 RKSMSYKGISKEKASSRIEINNQVHMFMMAD-RYHKQSDEIYEKLDEVVSKLKLVGYKPS 638
Query: 513 SSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISK 572
+S +L D++EE+K + +HSEKLAV YGL+ IR++KNLR+C DCHS +KL+SK
Sbjct: 639 TSGILIDLEEEDKKELVLWHSEKLAVCYGLISRRNESCIRIVKNLRICEDCHSFMKLVSK 698
Query: 573 VMGREIILRDANRFHHFKDGLCSCRDYW 600
V EI++RD RFHH G+CSCRDYW
Sbjct: 699 VYQIEIVVRDRTRFHHCSGGICSCRDYW 726
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/371 (23%), Positives = 164/371 (44%), Gaps = 52/371 (14%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVML---------------- 44
M + V+W ++ GY + G +A LF M ++ +V+L
Sbjct: 182 MCHPDAVAWNMIIDGYCQNGHYDDALRLFEDMRSSDMKPDSVILCTVLSACGHAGNLSYG 241
Query: 45 ---------GGFIRDSRI--------------DDARRLFDMMPEKDVVAQTNMVLGYCQD 81
G+ DS + D AR+++D + K ++ T M+ GY +
Sbjct: 242 RTIHEFVKDNGYAIDSHLQTALINMYANCGAMDLARKIYDGLSSKHLIVSTAMLSGYAKL 301
Query: 82 GRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEV-SWTAMLMGY 140
G V + R IFD+M +++++ W+ MISGY +++ A KLF+ M +K V ML
Sbjct: 302 GMVKDARFIFDQMIERDLVCWSAMISGYAESDQPQEALKLFDEMLQKRSVPDQITMLSVI 361
Query: 141 TQCGRI----QDAW---ELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDA 193
+ C + Q W + ++ +++ +N++I + G + KAR VF+ M K+
Sbjct: 362 SACSHVGALAQANWIHTYVDRSGFGRALSVNNALIDMYAKCGNLVKAREVFENMPRKNVI 421
Query: 194 TWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQL 253
+WS MI + G I LF M++ + N + I VL C ++ G ++ + +
Sbjct: 422 SWSSMINAFAMHGNADSAIKLFRRMKEVNIEPNGVTFIGVLYACGHAGLVEEGEKLFSSM 481
Query: 254 VRCQ-FDVDVYVASVLITMYIKCGELVKG-KLIFDNFASKDIVMWNSIISGYAQYG---L 308
+ ++ +Y + L K +LI + ++++W S++S +G L
Sbjct: 482 INEHGISPTREHYGCMVDLYCRANFLRKAIELIETMPFAPNVIIWGSLMSACQVHGEAEL 541
Query: 309 GEKSLKVFHEM 319
GE + K E+
Sbjct: 542 GEFAAKRLLEL 552
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 97/185 (52%), Gaps = 11/185 (5%)
Query: 207 YELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVAS 266
+ L I+ F L R +FPSL+ +S +++ +HG ++H + F D ++ +
Sbjct: 109 HNLRAINAFAL-----DRFSFPSLLKAVS---KVSAFNHGLEIHGLASKLGFVDDPFIQT 160
Query: 267 VLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMP 326
LI MY C ++ +L+FD D V WN II GY Q G + +L++F +M SS + P
Sbjct: 161 GLIAMYASCRRIMDARLLFDKMCHPDAVAWNMIIDGYCQNGHYDDALRLFEDMRSSDMKP 220
Query: 327 DDVTLVGVLSACSYTGKVKEGREIFESMKSK-YLVEPKTEHYACMVDLLGRAGQVEDAMK 385
D V L VLSAC + G + GR I E +K Y ++ + ++++ G ++ A K
Sbjct: 221 DSVILCTVLSACGHAGNLSYGRTIHEFVKDNGYAIDSHLQ--TALINMYANCGAMDLARK 278
Query: 386 LIEAM 390
+ + +
Sbjct: 279 IYDGL 283
>gi|297740109|emb|CBI30291.3| unnamed protein product [Vitis vinifera]
Length = 616
Score = 414 bits (1063), Expect = e-112, Method: Compositional matrix adjust.
Identities = 232/619 (37%), Positives = 355/619 (57%), Gaps = 53/619 (8%)
Query: 32 MPEKNVVSWTVMLGGFIRDSRIDDARRLFDMM------PEKDVVAQTNMVLGYCQDGRVD 85
MP++N+VSWT M+ G ++S+ +A R F M P + A ++ + G ++
Sbjct: 1 MPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQ--FAFSSAIRACASLGSIE 58
Query: 86 EGREIFDEMPKKNVISWTTMISG----YVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYT 141
G+++ K + S + S Y + A K+FE MP K+EVSWTAM+ GY+
Sbjct: 59 MGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYS 118
Query: 142 QCGRIQDAWELFKAMPMKSVV-----------------------ASNSMILGLG------ 172
+ G ++A FK M + V + +S ++ LG
Sbjct: 119 KIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIF 178
Query: 173 ----------QNGEVQKARVVFDQMRE-KDDATWSGMIKVYERKGYELEVIDLFTLMQKE 221
+ G+++ A VF E ++ +++ +I Y + + +F ++++
Sbjct: 179 VGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQ 238
Query: 222 GVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKG 281
G+ N + S++ CA+ A+L+ G Q+HAQ+++ FD D +V+S+L+ MY KCG L +
Sbjct: 239 GIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQA 298
Query: 282 KLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYT 341
FD + WNS++S + Q+GLG+ ++K+F M GV P+ +T + +L+ CS+
Sbjct: 299 IQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHA 358
Query: 342 GKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGS 401
G V+EG + F SM Y V P EHY+C++DLLGRAG++++A + I MPFEP+A W S
Sbjct: 359 GLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCS 418
Query: 402 LLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNV 461
LGACR H ++ ++AA+KL++LEPKN+G +LLSNIYA++ ++ DV +R MR NV
Sbjct: 419 FLGACRIHGDKEMGKLAAEKLVKLEPKNSGALVLLSNIYANERQWEDVRSVRMRMRDGNV 478
Query: 462 IKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVD 521
K PG SW++V K H+F D SHP I L+ + ++ AGY P + V D+D
Sbjct: 479 KKLPGYSWVDVGYKTHVFGAED-WSHPRKSAIYEKLDTLLDQIKAAGYVPRTDSVPLDMD 537
Query: 522 EEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILR 581
+ K L HSE++AVA+ L+ +P G PI V KNLRVC DCHSAIK ISKV GR+II+R
Sbjct: 538 DSMKEKLLHRHSERIAVAFALISMPIGKPIIVKKNLRVCVDCHSAIKFISKVTGRKIIVR 597
Query: 582 DANRFHHFKDGLCSCRDYW 600
D +RFHHF DG CSC DYW
Sbjct: 598 DNSRFHHFTDGSCSCGDYW 616
>gi|125577630|gb|EAZ18852.1| hypothetical protein OsJ_34389 [Oryza sativa Japonica Group]
Length = 587
Score = 414 bits (1063), Expect = e-112, Method: Compositional matrix adjust.
Identities = 218/535 (40%), Positives = 320/535 (59%), Gaps = 16/535 (2%)
Query: 78 YCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNR----IDVARKLFEVMPEKNEVSW 133
Y + GR+ R +F EMP +NV++W +++ V + R I+ L E N VS
Sbjct: 57 YFKTGRLKLARHLFGEMPNRNVVAWNAVMTNAVLDGRPLETIEAYFGLREAGGLPNVVSA 116
Query: 134 TAMLMGYTQCGRIQ--DAWELFKAMPMK-----SVVASNSMILGLGQNGEVQKARVVFDQ 186
A + C E F +K V NSM+ G+ KAR VFD
Sbjct: 117 CAF---FNACAGAMYLSLGEQFHGFVVKCGFEMDVSVLNSMVDFYGKCRCAGKARAVFDG 173
Query: 187 MREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHG 246
M ++ +W M+ Y + G E E + ++ G + S L+ CA L L G
Sbjct: 174 MGVRNSVSWCSMVAAYAQNGAEEEAFAAYLGARRSGEEPTDFMVSSALTTCAGLLGLHLG 233
Query: 247 RQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQY 306
R +HA VR D +++VAS L+ MY KCG + + IF +++V WN++I GYA
Sbjct: 234 RALHAVAVRSCIDANIFVASALVDMYGKCGCVEDAEQIFYETPQRNLVTWNAMIGGYAHI 293
Query: 307 GLGEKSLKVFHEMFSSG-VMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTE 365
G + +L VF +M SG P+ +TLV V+++CS G K+G E+FE+M+ ++ +EP+TE
Sbjct: 294 GDAQNALLVFDDMIRSGETAPNYITLVNVITSCSRGGLTKDGYELFETMRERFGIEPRTE 353
Query: 366 HYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQL 425
HYAC+VDLLGRAG E A ++I+ MP P +WG+LLGAC+ H K +L +AA+KL +L
Sbjct: 354 HYACVVDLLGRAGMEEQAYEVIQGMPMRPSISVWGALLGACKMHGKTELGRIAAEKLFEL 413
Query: 426 EPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCV 485
+P+++G ++LLSN++AS GR+ + ++RK M+ + K PGCSW+ + VH+F +D
Sbjct: 414 DPQDSGNHVLLSNMFASAGRWAEATDIRKEMKNVGIKKDPGCSWVTWKNVVHVFRAKD-T 472
Query: 486 SHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKL 545
H + I +L K+ ++ AGY PD+ + L+D++EEEK + HSEKLA+A+GL+ +
Sbjct: 473 KHEMYNEIQALLSKLRKQMQAAGYMPDTQYSLYDLEEEEKESEVFQHSEKLALAFGLICI 532
Query: 546 PEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
P GVPIR+MKNLR+C DCH A K IS ++GREII+RD NRFHHFK CSC DYW
Sbjct: 533 PPGVPIRIMKNLRICVDCHRAFKFISGIVGREIIVRDNNRFHHFKQYQCSCGDYW 587
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 107/272 (39%), Gaps = 52/272 (19%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEK----NVVSWTVMLGGFIRDSRIDDA 56
MP RNVV+W A++ V +G E ++ + E NVVS +
Sbjct: 73 MPNRNVVAWNAVMTNAVLDGRPLETIEAYFGLREAGGLPNVVSACAFFNACAGAMYLSLG 132
Query: 57 RRLFDMMP----EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+ + E DV +MV Y + + R +FD M +N +SW +M++ Y N
Sbjct: 133 EQFHGFVVKCGFEMDVSVLNSMVDFYGKCRCAGKARAVFDGMGVRNSVSWCSMVAAYAQN 192
Query: 113 NR-----------------------------------IDVARKLFEVMP----EKNEVSW 133
+ + R L V + N
Sbjct: 193 GAEEEAFAAYLGARRSGEEPTDFMVSSALTTCAGLLGLHLGRALHAVAVRSCIDANIFVA 252
Query: 134 TAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQM-REKDD 192
+A++ Y +CG ++DA ++F P +++V N+MI G G+ Q A +VFD M R +
Sbjct: 253 SALVDMYGKCGCVEDAEQIFYETPQRNLVTWNAMIGGYAHIGDAQNALLVFDDMIRSGET 312
Query: 193 A----TWSGMIKVYERKGYELEVIDLFTLMQK 220
A T +I R G + +LF M++
Sbjct: 313 APNYITLVNVITSCSRGGLTKDGYELFETMRE 344
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/231 (19%), Positives = 101/231 (43%), Gaps = 35/231 (15%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDM 62
+ N+ +A+V Y + G + +A +F++ P++N+V+W M+GG+ +A +FD
Sbjct: 246 DANIFVASALVDMYGKCGCVEDAEQIFYETPQRNLVTWNAMIGGYAHIGDAQNALLVFDD 305
Query: 63 M-----PEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDV 117
M + + N++ + G +G E+F+ M
Sbjct: 306 MIRSGETAPNYITLVNVITSCSRGGLTKDGYELFETM----------------------- 342
Query: 118 ARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQ-NGE 176
R+ F + P + L+G + G + A+E+ + MPM+ ++ +LG + +G+
Sbjct: 343 -RERFGIEPRTEHYACVVDLLG--RAGMEEQAYEVIQGMPMRPSISVWGALLGACKMHGK 399
Query: 177 VQKARVVFDQMRE---KDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVR 224
+ R+ +++ E +D + ++ G E D+ M+ G++
Sbjct: 400 TELGRIAAEKLFELDPQDSGNHVLLSNMFASAGRWAEATDIRKEMKNVGIK 450
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 87/192 (45%), Gaps = 8/192 (4%)
Query: 218 MQKEGVRVN---FPSLISVLSVCASLASLDHGRQVHAQLVRCQF-DVDVYVASVLITMYI 273
M + G+R N FPS + +++ G Q+H+ +R + VD +V+ + MY
Sbjct: 1 MLRLGLRPNDFTFPSAFKAAASAPPRSTI--GPQIHSLAIRFGYLPVDPFVSCAALDMYF 58
Query: 274 KCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVG 333
K G L + +F ++++V WN++++ G ++++ + + +G +P+ V+
Sbjct: 59 KTGRLKLARHLFGEMPNRNVVAWNAVMTNAVLDGRPLETIEAYFGLREAGGLPNVVSACA 118
Query: 334 VLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFE 393
+AC+ + G E F K E MVD G+ A + + M
Sbjct: 119 FFNACAGAMYLSLG-EQFHGFVVKCGFEMDVSVLNSMVDFYGKCRCAGKARAVFDGMGVR 177
Query: 394 PDAIIWGSLLGA 405
+++ W S++ A
Sbjct: 178 -NSVSWCSMVAA 188
>gi|356569698|ref|XP_003553033.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Glycine max]
Length = 824
Score = 414 bits (1063), Expect = e-112, Method: Compositional matrix adjust.
Identities = 231/647 (35%), Positives = 355/647 (54%), Gaps = 50/647 (7%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDM 62
E +V +++ Y G + A +F MP ++V SW M+ GF ++ + +A R+ D
Sbjct: 179 EHDVYVAASLIHLYSRFGAVEVAHKVFVDMPVRDVGSWNAMISGFCQNGNVAEALRVLDR 238
Query: 63 MPEKDV-------------VAQTNMVLG--------------------------YCQDGR 83
M ++V AQ+N V+G Y + GR
Sbjct: 239 MKTEEVKMDTVTVSSMLPICAQSNDVVGGVLVHLYVIKHGLESDVFVSNALINMYSKFGR 298
Query: 84 VDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVM------PEKNEVSWTAML 137
+ + + +FD M ++++SW ++I+ Y N+ A F+ M P+ V A +
Sbjct: 299 LQDAQRVFDGMEVRDLVSWNSIIAAYEQNDDPVTALGFFKEMLFVGMRPDLLTVVSLASI 358
Query: 138 MGYTQCGRIQDAWELFKAMPM---KSVVASNSMILGLGQNGEVQKARVVFDQMREKDDAT 194
G RI A F +V N+++ + G + AR VF+Q+ +D +
Sbjct: 359 FGQLSDRRIGRAVHGFVVRCRWLEVDIVIGNALVNMYAKLGSIDCARAVFEQLPSRDVIS 418
Query: 195 WSGMIKVYERKGYELEVIDLFTLMQKEGVRV-NFPSLISVLSVCASLASLDHGRQVHAQL 253
W+ +I Y + G E ID + +M++ V N + +S+L + + +L G ++H +L
Sbjct: 419 WNTLITGYAQNGLASEAIDAYNMMEEGRTIVPNQGTWVSILPAYSHVGALQQGMKIHGRL 478
Query: 254 VRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSL 313
++ +DV+VA+ LI MY KCG L +F + V WN+IIS +G GEK+L
Sbjct: 479 IKNCLFLDVFVATCLIDMYGKCGRLEDAMSLFYEIPQETSVPWNAIISSLGIHGHGEKAL 538
Query: 314 KVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDL 373
++F +M + GV D +T V +LSACS++G V E + F++M+ +Y ++P +HY CMVDL
Sbjct: 539 QLFKDMRADGVKADHITFVSLLSACSHSGLVDEAQWCFDTMQKEYRIKPNLKHYGCMVDL 598
Query: 374 LGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPY 433
GRAG +E A L+ MP + DA IWG+LL ACR H +L A+ +LL+++ +N G Y
Sbjct: 599 FGRAGYLEKAYNLVSNMPIQADASIWGTLLAACRIHGNAELGTFASDRLLEVDSENVGYY 658
Query: 434 ILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMI 493
+LLSNIYA+ G++ ++R R R + K PG S + V V +F + SHP+ I
Sbjct: 659 VLLSNIYANVGKWEGAVKVRSLARDRGLRKTPGWSSVVVGSVVEVFYAGN-QSHPQCAEI 717
Query: 494 MRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRV 553
L + ++ GY PD SFVL DV+E+EK L HSE+LA+ +G++ P PIR+
Sbjct: 718 YEELRVLNAKMKSLGYVPDYSFVLQDVEEDEKEEILTSHSERLAIVFGIISTPPKSPIRI 777
Query: 554 MKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
KNLRVCGDCH+A K ISK+ REII+RD+NRFHHFKDG+CSC DYW
Sbjct: 778 FKNLRVCGDCHNATKYISKITEREIIVRDSNRFHHFKDGICSCGDYW 824
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 95/366 (25%), Positives = 168/366 (45%), Gaps = 17/366 (4%)
Query: 51 SRIDDARRLFDMM----PEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMI 106
+ I+ A++L ++ +DVV T +V Y G + F + +KN+ SW +M+
Sbjct: 62 TNINVAKQLHALLLVLGKAQDVVLLTQLVTLYATLGDLSLSSTTFKHIQRKNIFSWNSMV 121
Query: 107 SGYVNNNR----IDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDA-----WELFKAMP 157
S YV R +D +L + + + ++ C + D W L
Sbjct: 122 SAYVRRGRYRDSMDCVTELLSLSGVRPDFYTFPPVL--KACLSLADGEKMHCWVLKMGFE 179
Query: 158 MKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTL 217
VA+ S+I + G V+ A VF M +D +W+ MI + + G E + +
Sbjct: 180 HDVYVAA-SLIHLYSRFGAVEVAHKVFVDMPVRDVGSWNAMISGFCQNGNVAEALRVLDR 238
Query: 218 MQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGE 277
M+ E V+++ ++ S+L +CA + G VH +++ + DV+V++ LI MY K G
Sbjct: 239 MKTEEVKMDTVTVSSMLPICAQSNDVVGGVLVHLYVIKHGLESDVFVSNALINMYSKFGR 298
Query: 278 LVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSA 337
L + +FD +D+V WNSII+ Y Q +L F EM G+ PD +T+V + S
Sbjct: 299 LQDAQRVFDGMEVRDLVSWNSIIAAYEQNDDPVTALGFFKEMLFVGMRPDLLTVVSLASI 358
Query: 338 CSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAI 397
+ GR + + +E +V++ + G ++ A + E +P D I
Sbjct: 359 FGQLSDRRIGRAVHGFVVRCRWLEVDIVIGNALVNMYAKLGSIDCARAVFEQLP-SRDVI 417
Query: 398 IWGSLL 403
W +L+
Sbjct: 418 SWNTLI 423
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 79/172 (45%), Gaps = 7/172 (4%)
Query: 239 SLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNS 298
S +++ +Q+HA L+ DV + + L+T+Y G+L F + K+I WNS
Sbjct: 60 SCTNINVAKQLHALLLVLGKAQDVVLLTQLVTLYATLGDLSLSSTTFKHIQRKNIFSWNS 119
Query: 299 IISGYAQYGLGEKSLKVFHEMFS-SGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSK 357
++S Y + G S+ E+ S SGV PD T VL AC + +G E K
Sbjct: 120 MVSAYVRRGRYRDSMDCVTELLSLSGVRPDFYTFPPVLKACL---SLADG-EKMHCWVLK 175
Query: 358 YLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL-GACRT 408
E A ++ L R G VE A K+ MP D W +++ G C+
Sbjct: 176 MGFEHDVYVAASLIHLYSRFGAVEVAHKVFVDMPVR-DVGSWNAMISGFCQN 226
>gi|224092370|ref|XP_002309579.1| predicted protein [Populus trichocarpa]
gi|222855555|gb|EEE93102.1| predicted protein [Populus trichocarpa]
Length = 854
Score = 414 bits (1063), Expect = e-112, Method: Compositional matrix adjust.
Identities = 224/601 (37%), Positives = 347/601 (57%), Gaps = 29/601 (4%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEK--NVVSWTVMLGGFIRDSRIDDARRLFDMMPEKD 67
+V Y + G + EA L + E +VV WT ++ G+++ ++ID AR+LFD M E+
Sbjct: 273 NCLVDMYSKCGKMDEAHGLLSRCDESEVDVVLWTTLVSGYVKSNKIDKARQLFDKMNERS 332
Query: 68 VVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVI----SWTTMISGYVNNNRIDVARKLFE 123
+V+ T M+ GY Q G E E+F +M +NVI + T++S V+ D+ R +
Sbjct: 333 LVSWTTMMSGYVQGGYYCESLELFQQMRFENVIPDEVALVTVLSACVHLEDFDLGRSVHA 392
Query: 124 VMPEKNEVS----WTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQK 179
+ + A+L Y +CG++ +A F+ +P KS + NSM+ G ++G V K
Sbjct: 393 FIVTYGMLVDGFLGNALLDLYAKCGKLDEALRTFEQLPCKSAASWNSMLDGFCRSGGVDK 452
Query: 180 ARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCAS 239
AR F+++ EKD +W+ M+ Y + E ++F MQ V+ + +LIS+LS CA
Sbjct: 453 ARDFFNKIPEKDIVSWNTMVNAYVKHDLFNESFEIFCKMQSSNVKPDKTTLISLLSSCAK 512
Query: 240 LASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSI 299
+ +L+HG V+ + + + +D + + LI MY KCG + IF K++ +W ++
Sbjct: 513 VGALNHGIWVNVYIEKNEIGIDAMLGTALIDMYGKCGCVEMAYEIFTQIIEKNVFVWTAM 572
Query: 300 ISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYL 359
++ YA G +++ ++ EM GV PD VT + +L+ACS+ G V EG + F ++S Y
Sbjct: 573 MAAYAMEGQALEAIDLYLEMEERGVKPDHVTFIALLAACSHGGLVDEGYKYFNKLRSFYN 632
Query: 360 VEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAA 419
+ P HY CMVDLLGR G +E+ +K IE MP EPD IW SL+ ACR+H ++LAE A
Sbjct: 633 IIPTIHHYGCMVDLLGRVGHLEETVKFIERMPIEPDVSIWSSLMRACRSHHNVELAEQAF 692
Query: 420 KKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMF 479
K+L++++P N G ++LLSNIYA GR+ DV+++R + + V K PG + IE VH F
Sbjct: 693 KQLIEIDPTNNGAHVLLSNIYADAGRWDDVSKVRTKLHETGVPKQPGFTMIEQNGVVHEF 752
Query: 480 TGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVA 539
+ VS I+ ML+ I L + ++E + HSE+LAVA
Sbjct: 753 VASNLVSAD----ILCMLQDIERRL---------------LVKQELSDTTSQHSERLAVA 793
Query: 540 YGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDY 599
+GL+ E PIRV+ ++R+C DCHS +KLIS+ REI++RD RFH F DG CSC+DY
Sbjct: 794 FGLINNQENSPIRVVNSVRMCRDCHSVMKLISQAYDREIVIRDNYRFHRFTDGHCSCKDY 853
Query: 600 W 600
W
Sbjct: 854 W 854
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 102/405 (25%), Positives = 197/405 (48%), Gaps = 45/405 (11%)
Query: 43 MLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNV--- 99
++G + + ++ + +LF+ M +DV++ M+ Y G E ++FDEM V
Sbjct: 174 LMGLYSKCGKLKEVCQLFEKMTHRDVISWNTMISCYVLKGMYREALDLFDEMLVSGVLPD 233
Query: 100 -ISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMG-----YTQCGRIQDAWELF 153
I+ +++S +++ ++L + + N++ L+ Y++CG++ +A L
Sbjct: 234 EITMVSLVSTCAKLKDLEMGKRLHLYIVD-NKLWIRGSLLNCLVDMYSKCGKMDEAHGLL 292
Query: 154 KAMPMK--SVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEV 211
VV +++ G ++ ++ KAR +FD+M E+ +W+ M+ Y + GY E
Sbjct: 293 SRCDESEVDVVLWTTLVSGYVKSNKIDKARQLFDKMNERSLVSWTTMMSGYVQGGYYCES 352
Query: 212 IDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITM 271
++LF M+ E V + +L++VLS C L D GR VHA +V VD ++ + L+ +
Sbjct: 353 LELFQQMRFENVIPDEVALVTVLSACVHLEDFDLGRSVHAFIVTYGMLVDGFLGNALLDL 412
Query: 272 YIKCGEL-------------------------------VKGKLIFDNFASKDIVMWNSII 300
Y KCG+L K + F+ KDIV WN+++
Sbjct: 413 YAKCGKLDEALRTFEQLPCKSAASWNSMLDGFCRSGGVDKARDFFNKIPEKDIVSWNTMV 472
Query: 301 SGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLV 360
+ Y ++ L +S ++F +M SS V PD TL+ +LS+C+ G + G + ++ K +
Sbjct: 473 NAYVKHDLFNESFEIFCKMQSSNVKPDKTTLISLLSSCAKVGALNHGIWVNVYIE-KNEI 531
Query: 361 EPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
++D+ G+ G VE A ++ + E + +W +++ A
Sbjct: 532 GIDAMLGTALIDMYGKCGCVEMAYEIFTQI-IEKNVFVWTAMMAA 575
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 150/300 (50%), Gaps = 47/300 (15%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV----------------------- 37
M ER++VSWT M+ GYV+ G E+ LF QM +NV
Sbjct: 328 MNERSLVSWTTMMSGYVQGGYYCESLELFQQMRFENVIPDEVALVTVLSACVHLEDFDLG 387
Query: 38 -------VSWTVMLGGFIRDS---------RIDDARRLFDMMPEKDVVAQTNMVLGYCQD 81
V++ +++ GF+ ++ ++D+A R F+ +P K + +M+ G+C+
Sbjct: 388 RSVHAFIVTYGMLVDGFLGNALLDLYAKCGKLDEALRTFEQLPCKSAASWNSMLDGFCRS 447
Query: 82 GRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKN-EVSWTAMLMGY 140
G VD+ R+ F+++P+K+++SW TM++ YV ++ + + ++F M N + T ++
Sbjct: 448 GGVDKARDFFNKIPEKDIVSWNTMVNAYVKHDLFNESFEIFCKMQSSNVKPDKTTLISLL 507
Query: 141 TQCGRI----QDAW---ELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDA 193
+ C ++ W + K + ++I G+ G V+ A +F Q+ EK+
Sbjct: 508 SSCAKVGALNHGIWVNVYIEKNEIGIDAMLGTALIDMYGKCGCVEMAYEIFTQIIEKNVF 567
Query: 194 TWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQL 253
W+ M+ Y +G LE IDL+ M++ GV+ + + I++L+ C+ +D G + +L
Sbjct: 568 VWTAMMAAYAMEGQALEAIDLYLEMEERGVKPDHVTFIALLAACSHGGLVDEGYKYFNKL 627
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 88/343 (25%), Positives = 165/343 (48%), Gaps = 42/343 (12%)
Query: 165 NSMILGL-GQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGV 223
N+ ++GL + G++++ +F++M +D +W+ MI Y KG E +DLF M GV
Sbjct: 171 NNNLMGLYSKCGKLKEVCQLFEKMTHRDVISWNTMISCYVLKGMYREALDLFDEMLVSGV 230
Query: 224 RVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGEL----- 278
+ +++S++S CA L L+ G+++H +V + + + + L+ MY KCG++
Sbjct: 231 LPDEITMVSLVSTCAKLKDLEMGKRLHLYIVDNKLWIRGSLLNCLVDMYSKCGKMDEAHG 290
Query: 279 ----------------------------VKGKLIFDNFASKDIVMWNSIISGYAQYGLGE 310
K + +FD + +V W +++SGY Q G
Sbjct: 291 LLSRCDESEVDVVLWTTLVSGYVKSNKIDKARQLFDKMNERSLVSWTTMMSGYVQGGYYC 350
Query: 311 KSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACM 370
+SL++F +M V+PD+V LV VLSAC + GR + + + ++ A +
Sbjct: 351 ESLELFQQMRFENVIPDEVALVTVLSACVHLEDFDLGRSVHAFIVTYGMLVDGFLGNA-L 409
Query: 371 VDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL-GACRTHMKLDLAEVAAKKLLQLEPKN 429
+DL + G++++A++ E +P + A W S+L G CR+ + A ++ K+
Sbjct: 410 LDLYAKCGKLDEALRTFEQLPCK-SAASWNSMLDGFCRS----GGVDKARDFFNKIPEKD 464
Query: 430 AGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEV 472
+ + N Y F++ E+ M+ NV KP + I +
Sbjct: 465 IVSWNTMVNAYVKHDLFNESFEIFCKMQSSNV-KPDKTTLISL 506
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 148/289 (51%), Gaps = 15/289 (5%)
Query: 180 ARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCAS 239
A + E + W+ +++ ++G EV++ + M +GV ++ + ++ C
Sbjct: 86 AHQILSYSHEPESIIWNTLLENKLKEGCPQEVLECYYHMVTQGVLLDISTFHFLIHACCK 145
Query: 240 LASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSI 299
+ G +VH ++++C F + + + L+ +Y KCG+L + +F+ +D++ WN++
Sbjct: 146 NFDVKLGSEVHGRILKCGFGRNKSLNNNLMGLYSKCGKLKEVCQLFEKMTHRDVISWNTM 205
Query: 300 ISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYL 359
IS Y G+ ++L +F EM SGV+PD++T+V ++S C+ ++ G+ + Y+
Sbjct: 206 ISCYVLKGMYREALDLFDEMLVSGVLPDEITMVSLVSTCAKLKDLEMGKRL-----HLYI 260
Query: 360 VEPKT----EHYACMVDLLGRAGQVEDAMKLIEAM-PFEPDAIIWGSLLGACRTHMKLDL 414
V+ K C+VD+ + G++++A L+ E D ++W +L+ K+D
Sbjct: 261 VDNKLWIRGSLLNCLVDMYSKCGKMDEAHGLLSRCDESEVDVVLWTTLVSGYVKSNKID- 319
Query: 415 AEVAAKKLL-QLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVI 462
A++L ++ ++ + + + Y G + + EL + MR NVI
Sbjct: 320 ---KARQLFDKMNERSLVSWTTMMSGYVQGGYYCESLELFQQMRFENVI 365
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/271 (21%), Positives = 124/271 (45%), Gaps = 20/271 (7%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
+P ++ SW +M+ G+ G + +A F ++PEK++VSW M+ +++ +++ +F
Sbjct: 429 LPCKSAASWNSMLDGFCRSGGVDKARDFFNKIPEKDIVSWNTMVNAYVKHDLFNESFEIF 488
Query: 61 DMMPEKDVVA-QTNMV--LGYCQD-GRVDEGREIFDEMPKKNV----ISWTTMISGYVNN 112
M +V +T ++ L C G ++ G + + K + + T +I Y
Sbjct: 489 CKMQSSNVKPDKTTLISLLSSCAKVGALNHGIWVNVYIEKNEIGIDAMLGTALIDMYGKC 548
Query: 113 NRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSV----VASNSMI 168
+++A ++F + EKN WTAM+ Y G+ +A +L+ M + V V +++
Sbjct: 549 GCVEMAYEIFTQIIEKNVFVWTAMMAAYAMEGQALEAIDLYLEMEERGVKPDHVTFIALL 608
Query: 169 LGLGQNGEVQKARVVFDQMREKDDAT-----WSGMIKVYERKGYELEVIDLFTLMQKEGV 223
G V + F+++R + + M+ + R G+ E + +++ +
Sbjct: 609 AACSHGGLVDEGYKYFNKLRSFYNIIPTIHHYGCMVDLLGRVGHLEETV---KFIERMPI 665
Query: 224 RVNFPSLISVLSVCASLASLDHGRQVHAQLV 254
+ S++ C S +++ Q QL+
Sbjct: 666 EPDVSIWSSLMRACRSHHNVELAEQAFKQLI 696
Score = 47.4 bits (111), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 35/176 (19%), Positives = 75/176 (42%), Gaps = 5/176 (2%)
Query: 230 LISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFA 289
+I +L C+++ +HA L+ D + S ++ + L I
Sbjct: 38 IIDLLKSCSNIREFS---PIHAHLITANLIHDPEITSQVLAFLLSVNNLDCAHQILSYSH 94
Query: 290 SKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGRE 349
+ ++WN+++ + G ++ L+ ++ M + GV+ D T ++ AC VK G E
Sbjct: 95 EPESIIWNTLLENKLKEGCPQEVLECYYHMVTQGVLLDISTFHFLIHACCKNFDVKLGSE 154
Query: 350 IFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
+ + K+ + M L + G++++ +L E M D I W +++
Sbjct: 155 VHGRILKCGFGRNKSLNNNLM-GLYSKCGKLKEVCQLFEKMTHR-DVISWNTMISC 208
>gi|359479914|ref|XP_002268148.2| PREDICTED: uncharacterized protein LOC100250295 [Vitis vinifera]
Length = 1130
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 212/472 (44%), Positives = 296/472 (62%), Gaps = 7/472 (1%)
Query: 134 TAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDA 193
T+++ Y+ CG + A ++F +P + + NS+I Q G V AR +F M E++
Sbjct: 103 TSLISMYSSCGNLGFARQVFDEIPQPDLPSWNSIINANFQAGLVDMARNLFAVMPERNVI 162
Query: 194 TWSGMIKVYERKGYELEVIDLFTLMQKEGV---RVNFPSLISVLSVCASLASLDHGRQVH 250
+WS MI Y R G E + LF MQ GV R N ++ VL+ C L +L+HG+ H
Sbjct: 163 SWSCMINGYVRCGQYKEALALFREMQMLGVNDVRPNEFTMSGVLAACGRLGALEHGKWAH 222
Query: 251 AQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFA-SKDIVMWNSIISGYAQYGLG 309
A + +C VDV + + LI MY KCG + K +F N +KD++ W+++ISG A +GL
Sbjct: 223 AYIDKCGMPVDVVLGTALIDMYAKCGSVEKATWVFSNLGPNKDVMAWSAMISGLAMHGLA 282
Query: 310 EKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYAC 369
E+ + +F +M + GV P+ VT + V AC + G V EG++ M Y + P +HY C
Sbjct: 283 EECVGLFSKMINQGVRPNAVTFLAVFCACVHGGLVSEGKDYLRRMTEDYSIIPTIQHYGC 342
Query: 370 MVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKN 429
MVDL GRAG++++A ++++MP EPD ++WG+LL R H ++ E+A KKL++LEP N
Sbjct: 343 MVDLYGRAGRIKEAWNVVKSMPMEPDVLVWGALLSGSRMHGDIETCELALKKLIELEPTN 402
Query: 430 AGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVH-MFTGRDCVSHP 488
+G Y+LLSN+YA +GR+ DV +R M + K PGCS IEV +H F G D SHP
Sbjct: 403 SGAYVLLSNVYAKRGRWEDVRHVRDLMETMGIKKVPGCSLIEVGGVLHEFFVGDD--SHP 460
Query: 489 EHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEG 548
E I MLE+I L+ GY ++ VL D+DEE K +L HSEKLA+AYG +K G
Sbjct: 461 ETRQIHMMLEEILERLKVEGYVGNTKEVLLDLDEEGKELALSLHSEKLALAYGFLKTSPG 520
Query: 549 VPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
PIR++KNLR+C DCH AIK+ISKV REII+RD NRFHHF GLCSCRDYW
Sbjct: 521 TPIRIVKNLRICRDCHVAIKMISKVFDREIIVRDCNRFHHFTQGLCSCRDYW 572
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 125/289 (43%), Gaps = 51/289 (17%)
Query: 67 DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMP 126
D QT+++ Y G + R++FDE+P+ ++ SW ++I+ +D+AR LF VMP
Sbjct: 98 DPFVQTSLISMYSSCGNLGFARQVFDEIPQPDLPSWNSIINANFQAGLVDMARNLFAVMP 157
Query: 127 EKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKS-------------------------- 160
E+N +SW+ M+ GY +CG+ ++A LF+ M M
Sbjct: 158 ERNVISWSCMINGYVRCGQYKEALALFREMQMLGVNDVRPNEFTMSGVLAACGRLGALEH 217
Query: 161 ----------------VVASNSMILGLGQNGEVQKARVVFDQM-REKDDATWSGMIKVYE 203
VV ++I + G V+KA VF + KD WS MI
Sbjct: 218 GKWAHAYIDKCGMPVDVVLGTALIDMYAKCGSVEKATWVFSNLGPNKDVMAWSAMISGLA 277
Query: 204 RKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVY 263
G E + LF+ M +GVR N + ++V C + G+ L R D +
Sbjct: 278 MHGLAEECVGLFSKMINQGVRPNAVTFLAVFCACVHGGLVSEGKD---YLRRMTEDYSII 334
Query: 264 VA----SVLITMYIKCGELVKGKLIFDNFA-SKDIVMWNSIISGYAQYG 307
++ +Y + G + + + + D+++W +++SG +G
Sbjct: 335 PTIQHYGCMVDLYGRAGRIKEAWNVVKSMPMEPDVLVWGALLSGSRMHG 383
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 110/254 (43%), Gaps = 40/254 (15%)
Query: 195 WSGMIKVY-----ERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQV 249
W+ +I+ + + G I +F M+ GV+ +F + +L AS + L GR V
Sbjct: 27 WNTLIRAHVQARAQPTGPTHSPISIFVRMRFHGVQPDFHTFPFLLQSFASPSLLHLGRSV 86
Query: 250 HAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSI---------- 299
HAQ++R +D +V + LI+MY CG L + +FD D+ WNSI
Sbjct: 87 HAQILRFGLAIDPFVQTSLISMYSSCGNLGFARQVFDEIPQPDLPSWNSIINANFQAGLV 146
Query: 300 ---------------------ISGYAQYGLGEKSLKVFHEMFSSG---VMPDDVTLVGVL 335
I+GY + G +++L +F EM G V P++ T+ GVL
Sbjct: 147 DMARNLFAVMPERNVISWSCMINGYVRCGQYKEALALFREMQMLGVNDVRPNEFTMSGVL 206
Query: 336 SACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPD 395
+AC G ++ G+ + K + ++D+ + G VE A + + D
Sbjct: 207 AACGRLGALEHGKWA-HAYIDKCGMPVDVVLGTALIDMYAKCGSVEKATWVFSNLGPNKD 265
Query: 396 AIIWGSLLGACRTH 409
+ W +++ H
Sbjct: 266 VMAWSAMISGLAMH 279
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 76/345 (22%), Positives = 141/345 (40%), Gaps = 92/345 (26%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
+P+ ++ SW +++ + G++ A LF MPE+NV+SW+ M+ G++R + +A LF
Sbjct: 125 IPQPDLPSWNSIINANFQAGLVDMARNLFAVMPERNVISWSCMINGYVRCGQYKEALALF 184
Query: 61 ---------DMMPEK---------------------------------DVVAQTNMVLGY 78
D+ P + DVV T ++ Y
Sbjct: 185 REMQMLGVNDVRPNEFTMSGVLAACGRLGALEHGKWAHAYIDKCGMPVDVVLGTALIDMY 244
Query: 79 CQDGRVDEGREIFDEM-PKKNVISWTTMISGYVNNNRIDVARKLFEVMPEK----NEVSW 133
+ G V++ +F + P K+V++W+ MISG + + LF M + N V++
Sbjct: 245 AKCGSVEKATWVFSNLGPNKDVMAWSAMISGLAMHGLAEECVGLFSKMINQGVRPNAVTF 304
Query: 134 TAMLMG------------------------------------YTQCGRIQDAWELFKAMP 157
A+ Y + GRI++AW + K+MP
Sbjct: 305 LAVFCACVHGGLVSEGKDYLRRMTEDYSIIPTIQHYGCMVDLYGRAGRIKEAWNVVKSMP 364
Query: 158 MK-SVVASNSMILGLGQNGEVQKARVVFDQMRE---KDDATWSGMIKVYERKGYELEVID 213
M+ V+ +++ G +G+++ + ++ E + + + VY ++G +V
Sbjct: 365 MEPDVLVWGALLSGSRMHGDIETCELALKKLIELEPTNSGAYVLLSNVYAKRGRWEDVRH 424
Query: 214 LFTLMQKEGV-RVNFPSLISVLSVCASLASLDHG----RQVHAQL 253
+ LM+ G+ +V SLI V V D RQ+H L
Sbjct: 425 VRDLMETMGIKKVPGCSLIEVGGVLHEFFVGDDSHPETRQIHMML 469
>gi|449480927|ref|XP_004156032.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g49710-like [Cucumis sativus]
Length = 720
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 237/652 (36%), Positives = 361/652 (55%), Gaps = 60/652 (9%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMP 64
NV S+ ++ Y +E + A LF +MP+ + VS+ ++ + R A +LF M
Sbjct: 73 NVFSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLFLEMR 132
Query: 65 EKDVVAQTNMVLGYCQDGRVDEG--REIFDEMPKKNVISWTT----MISGYVNNNRIDVA 118
E + + G ++ G R++ + S+ + +I+ Y N + A
Sbjct: 133 EAFLDMDGFTLSGIITACGINVGLIRQLHALSVVTGLDSYVSVGNALITSYSKNGFLKEA 192
Query: 119 RKLFEVMPE-KNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVA------------SN 165
R++F + E ++EVSW +M++ Y Q A EL+ M ++ ++ +N
Sbjct: 193 RRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVLTAFTN 252
Query: 166 SMIL-------------GLGQNGEVQKA---------------RVVFDQMREKDDATWSG 197
L G QN V R VFD++ D W+
Sbjct: 253 VQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNPDLVLWNT 312
Query: 198 MIKVYE-RKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRC 256
MI Y + E ++ F +Q G R + SL+ V+S C++++S GRQVH ++
Sbjct: 313 MISGYSLYEDLSDEALECFRQLQGVGHRPDDCSLVCVISACSNMSSPSQGRQVHGLALKL 372
Query: 257 QFDVD-VYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKV 315
+ + V + LI MY KCG L K +FD + V +NS+I+GYAQ+G+G +SL +
Sbjct: 373 DIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQHGMGFQSLHL 432
Query: 316 FHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLG 375
F M P ++T + VL+AC++TG+V++G+ F MK K+ +EP+ H++CM+DLLG
Sbjct: 433 FQRMLEMDFTPTNITFISVLAACAHTGRVEDGKIYFNMMKQKFGIEPEAGHFSCMIDLLG 492
Query: 376 RAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYIL 435
RAG++ +A +LIE +PF+P W +LLGACR H ++LA AA +LLQL+P NA PY++
Sbjct: 493 RAGKLSEAERLIETIPFDPGFFXWSALLGACRIHGNVELAIKAANRLLQLDPLNAAPYVM 552
Query: 436 LSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMR 495
L+NIY+ GR D A +RK MR R V K PGCSWIEV +++H+F D HPMI +
Sbjct: 553 LANIYSDNGRLQDAASVRKLMRDRGVKKKPGCSWIEVNRRIHIFVAEDTF----HPMIKK 608
Query: 496 MLEKIGGLLR---EAGYCPD--SSFVLHD--VDEEEKVHSLRYHSEKLAVAYGLVKLPEG 548
+ E + ++R + GY P+ S+ V D V + E+ L +HSEKLAV++GL+ EG
Sbjct: 609 IQEYLEEMMRKIKKVGYTPEVRSASVGGDDRVWQREEELRLGHHSEKLAVSFGLMSTREG 668
Query: 549 VPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
PI V KNLR+C DCH+AIK IS+V+ REI +RD++RFH FKDG CSC YW
Sbjct: 669 EPILVFKNLRICVDCHNAIKYISEVVKREITVRDSHRFHCFKDGQCSCGGYW 720
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 114/424 (26%), Positives = 211/424 (49%), Gaps = 13/424 (3%)
Query: 52 RIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVN 111
R+ ARR+FD + +V + ++ Y ++ V+ ++FDEMP+ + +S+ T+I+ Y
Sbjct: 58 RLSAARRVFDHTHDCNVFSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYAR 117
Query: 112 NNRIDVARKLFEVMPEKNEVSWTAMLMG-YTQC----GRIQDAWELFKAMPMKSVVA-SN 165
A +LF M E L G T C G I+ L + S V+ N
Sbjct: 118 RGDTQPAFQLFLEMREAFLDMDGFTLSGIITACGINVGLIRQLHALSVVTGLDSYVSVGN 177
Query: 166 SMILGLGQNGEVQKARVVFDQMRE-KDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVR 224
++I +NG +++AR +F + E +D+ +W+ M+ Y + + ++L+ M G+
Sbjct: 178 ALITSYSKNGFLKEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLI 237
Query: 225 VNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGE-LVKGKL 283
V+ +L SVL+ ++ L G Q HA+L++ + + +V S LI +Y KCG ++ +
Sbjct: 238 VDIFTLASVLTAFTNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRK 297
Query: 284 IFDNFASKDIVMWNSIISGYAQY-GLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTG 342
+FD ++ D+V+WN++ISGY+ Y L +++L+ F ++ G PDD +LV V+SACS
Sbjct: 298 VFDEISNPDLVLWNTMISGYSLYEDLSDEALECFRQLQGVGHRPDDCSLVCVISACSNMS 357
Query: 343 KVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSL 402
+GR++ + + ++ + + G + DA L + MP E + + + S+
Sbjct: 358 SPSQGRQVHGLALKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMP-EHNTVSYNSM 416
Query: 403 LGACRTH-MKLDLAEVAAKKL-LQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRN 460
+ H M + + L + P N +I + A GR D M+++
Sbjct: 417 IAGYAQHGMGFQSLHLFQRMLEMDFTPTNI-TFISVLAACAHTGRVEDGKIYFNMMKQKF 475
Query: 461 VIKP 464
I+P
Sbjct: 476 GIEP 479
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 68/138 (49%), Gaps = 8/138 (5%)
Query: 226 NFPSLI----SVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKG 281
+F SL+ L C + L G+ +HA ++ Y+++ + +Y KC L
Sbjct: 3 HFSSLLHSFRQFLKTCIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAA 62
Query: 282 KLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYT 341
+ +FD+ ++ +N++IS YA+ E ++V H++F PD V+ +++A +
Sbjct: 63 RRVFDHTHDCNVFSFNTLISAYAK----ESYVEVAHQLFDEMPQPDSVSYNTLIAAYARR 118
Query: 342 GKVKEGREIFESMKSKYL 359
G + ++F M+ +L
Sbjct: 119 GDTQPAFQLFLEMREAFL 136
>gi|359475558|ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 848
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 225/641 (35%), Positives = 359/641 (56%), Gaps = 53/641 (8%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMP----- 64
+++ Y G + A +LF MP +++ SW M+ G I++ A + D M
Sbjct: 211 ASLIHMYSRFGFVGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIN 270
Query: 65 ----------------------------------EKDVVAQTNMVLGYCQDGRVDEGREI 90
E ++ ++ Y + G + + +++
Sbjct: 271 MDSVTVASILPVCAQLGDISTATLIHLYVIKHGLEFELFVSNALINMYAKFGNLGDAQKV 330
Query: 91 FDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMP----EKNEVSWTAMLMGYTQC--- 143
F +M ++V+SW ++I+ Y N+ AR F M E + ++ ++ Q
Sbjct: 331 FQQMFLRDVVSWNSIIAAYEQNDDPVTARGFFFKMQLNGLEPDLLTLVSLASIAAQSRDY 390
Query: 144 --GRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKV 201
R + + + M++VV N+++ + G + A VF+ + KD +W+ +I
Sbjct: 391 KNSRSVHGFIMRRGWLMEAVVIGNAVMDMYAKLGVIDSAHKVFNLIPVKDVVSWNTLISG 450
Query: 202 YERKGYELEVIDLFTLMQK-EGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDV 260
Y + G E I+++ +M++ +++N + +S+L+ A + +L G ++H L++ +
Sbjct: 451 YTQNGLASEAIEVYRMMEECREIKLNQGTWVSILAAYAHVGALQQGMRIHGHLIKTNLHL 510
Query: 261 DVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMF 320
DV+V + LI +Y KCG LV +F + V WN+IIS + +G GEK+LK+F EM
Sbjct: 511 DVFVGTCLIDLYGKCGRLVDAMCLFYQVPRESSVPWNAIISCHGIHGHGEKALKLFREMQ 570
Query: 321 SSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQV 380
GV PD VT + +LSACS++G V EG+ F M+ +Y ++P +HY CMVDLLGRAG +
Sbjct: 571 DEGVKPDHVTFISLLSACSHSGLVDEGKWFFHLMQ-EYGIKPSLKHYGCMVDLLGRAGFL 629
Query: 381 EDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIY 440
E A I+ MP PDA IWG+LLGACR H ++L + A+ +L +++ +N G Y+LLSNIY
Sbjct: 630 EMAYDFIKDMPLHPDASIWGALLGACRIHGNIELGKFASDRLFEVDSENVGYYVLLSNIY 689
Query: 441 ASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMF-TGRDCVSHPEHPMIMRMLEK 499
A+ G++ V ++R R+R + K PG S IEV ++V +F TG SHP+ I L
Sbjct: 690 ANVGKWEGVDKVRSLARERGLKKTPGWSSIEVNRRVDIFYTGNQ--SHPKCKEIYAELRI 747
Query: 500 IGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRV 559
+ ++ GY PD SFVL DV+E+EK H L HSE+LA+A+G++ P IR+ KNLRV
Sbjct: 748 LTAKMKSLGYIPDYSFVLQDVEEDEKEHILTSHSERLAIAFGIISTPPKSAIRIFKNLRV 807
Query: 560 CGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
CGDCH+A K IS++ REI++RD+ RFHHFK+G+CSC DYW
Sbjct: 808 CGDCHNATKFISRITEREIVVRDSKRFHHFKNGICSCGDYW 848
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 112/452 (24%), Positives = 211/452 (46%), Gaps = 29/452 (6%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMP-----EKNVVSWTVMLGGFIRDSRIDD 55
+ ++V +W +M+ YV G EA F+Q+ + + ++ +L + D
Sbjct: 134 IQRKDVYTWNSMISAYVRNGHFREAIDCFYQLLLVTKFQADFYTFPPVLKAC---QTLVD 190
Query: 56 ARRL----FDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVN 111
R++ F + + DV +++ Y + G V R +FD+MP +++ SW MISG +
Sbjct: 191 GRKIHCWVFKLGFQWDVFVAASLIHMYSRFGFVGIARSLFDDMPFRDMGSWNAMISGLIQ 250
Query: 112 NNRIDVARKLFEVMP----EKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMK-----SVV 162
N A + + M + V+ ++L Q G I A L +K +
Sbjct: 251 NGNAAQALDVLDEMRLEGINMDSVTVASILPVCAQLGDISTA-TLIHLYVIKHGLEFELF 309
Query: 163 ASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEG 222
SN++I + G + A+ VF QM +D +W+ +I YE+ + F MQ G
Sbjct: 310 VSNALINMYAKFGNLGDAQKVFQQMFLRDVVSWNSIIAAYEQNDDPVTARGFFFKMQLNG 369
Query: 223 VRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVD-VYVASVLITMYIKCGELVKG 281
+ + +L+S+ S+ A + R VH ++R + ++ V + + ++ MY K G +
Sbjct: 370 LEPDLLTLVSLASIAAQSRDYKNSRSVHGFIMRRGWLMEAVVIGNAVMDMYAKLGVIDSA 429
Query: 282 KLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSS-GVMPDDVTLVGVLSACSY 340
+F+ KD+V WN++ISGY Q GL ++++V+ M + + T V +L+A ++
Sbjct: 430 HKVFNLIPVKDVVSWNTLISGYTQNGLASEAIEVYRMMEECREIKLNQGTWVSILAAYAH 489
Query: 341 TGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWG 400
G +++G I + L C++DL G+ G++ DAM L +P E ++ W
Sbjct: 490 VGALQQGMRIHGHLIKTNL-HLDVFVGTCLIDLYGKCGRLVDAMCLFYQVPRE-SSVPWN 547
Query: 401 SLLGACRTHMKLDLAEVAAKKLLQLEPKNAGP 432
+++ H E A K +++ + P
Sbjct: 548 AIISCHGIHGH---GEKALKLFREMQDEGVKP 576
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 105/394 (26%), Positives = 183/394 (46%), Gaps = 13/394 (3%)
Query: 78 YCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNR----IDVARKLFEVMPEKNEVSW 133
Y G V R FD++ +K+V +W +MIS YV N ID +L V + +
Sbjct: 118 YASLGDVSLSRGTFDQIQRKDVYTWNSMISAYVRNGHFREAIDCFYQLLLVTKFQADFYT 177
Query: 134 TAMLMGYTQC---GRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREK 190
++ Q GR W +FK V + S+I + G V AR +FD M +
Sbjct: 178 FPPVLKACQTLVDGRKIHCW-VFKLGFQWDVFVAASLIHMYSRFGFVGIARSLFDDMPFR 236
Query: 191 DDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVH 250
D +W+ MI + G + +D+ M+ EG+ ++ ++ S+L VCA L + +H
Sbjct: 237 DMGSWNAMISGLIQNGNAAQALDVLDEMRLEGINMDSVTVASILPVCAQLGDISTATLIH 296
Query: 251 AQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGE 310
+++ + +++V++ LI MY K G L + +F +D+V WNSII+ Y Q
Sbjct: 297 LYVIKHGLEFELFVSNALINMYAKFGNLGDAQKVFQQMFLRDVVSWNSIIAAYEQNDDPV 356
Query: 311 KSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFES-MKSKYLVEPKTEHYAC 369
+ F +M +G+ PD +TLV + S + + K R + M+ +L+E A
Sbjct: 357 TARGFFFKMQLNGLEPDLLTLVSLASIAAQSRDYKNSRSVHGFIMRRGWLMEAVVIGNAV 416
Query: 370 MVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL-GACRTHMKLDLAEVAAKKLLQLEPK 428
M D+ + G ++ A K+ +P + D + W +L+ G + + + EV E K
Sbjct: 417 M-DMYAKLGVIDSAHKVFNLIPVK-DVVSWNTLISGYTQNGLASEAIEVYRMMEECREIK 474
Query: 429 -NAGPYILLSNIYASQGRFHDVAELRKNMRKRNV 461
N G ++ + YA G + ++ K N+
Sbjct: 475 LNQGTWVSILAAYAHVGALQQGMRIHGHLIKTNL 508
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 72/161 (44%), Gaps = 6/161 (3%)
Query: 246 GRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQ 305
+++HA LV +++ L+ +Y G++ + FD KD+ WNS+IS Y +
Sbjct: 92 AKRLHALLVVSGKIQSNFISIRLVNLYASLGDVSLSRGTFDQIQRKDVYTWNSMISAYVR 151
Query: 306 YGLGEKSLKVFHE-MFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKT 364
G +++ F++ + + D T VL AC + +GR+I K +
Sbjct: 152 NGHFREAIDCFYQLLLVTKFQADFYTFPPVLKACQ---TLVDGRKI-HCWVFKLGFQWDV 207
Query: 365 EHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
A ++ + R G V A L + MPF D W +++
Sbjct: 208 FVAASLIHMYSRFGFVGIARSLFDDMPFR-DMGSWNAMISG 247
>gi|356529928|ref|XP_003533538.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic-like [Glycine max]
Length = 690
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 211/564 (37%), Positives = 338/564 (59%), Gaps = 22/564 (3%)
Query: 53 IDDARRLFDMMP----EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISG 108
I +R+F+ M E D+ ++ + + G + + R++FDEMP+K++ SW TMI G
Sbjct: 133 IRGVKRVFNYMVNSGFEPDLYVMNRVLFVHVKCGLMLDARKLFDEMPEKDMASWMTMIGG 192
Query: 109 YVNNNRIDVARKLFEVMPEK----NEVSWTAML-----MGYTQCGRIQDAWELFKAMPMK 159
+V++ A LF M E+ ++T M+ +G Q GR + L + +
Sbjct: 193 FVDSGNFSEAFGLFLCMWEEFNDGRSRTFTTMIRASAGLGLVQVGRQIHSCALKRGVGDD 252
Query: 160 SVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQ 219
+ V S ++I + G ++ A VFDQM EK W+ +I Y GY E + + M+
Sbjct: 253 TFV-SCALIDMYSKCGSIEDAHCVFDQMPEKTTVGWNSIIASYALHGYSEEALSFYYEMR 311
Query: 220 KEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELV 279
G +++ ++ V+ +CA LASL++ +Q HA LVR +D D+ + L+ Y K G +
Sbjct: 312 DSGAKIDHFTISIVIRICARLASLEYAKQAHAALVRRGYDTDIVANTALVDFYSKWGRME 371
Query: 280 KGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACS 339
+F+ K+++ WN++I+GY +G GE+++++F +M G++P+ VT + VLSACS
Sbjct: 372 DAWHVFNRMRRKNVISWNALIAGYGNHGQGEEAVEMFEQMLREGMIPNHVTFLAVLSACS 431
Query: 340 YTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIW 399
Y+G + G EIF SM + V+P+ HYACMV+LLGR G +++A +LI + PF+P +W
Sbjct: 432 YSGLSERGWEIFYSMSRDHKVKPRAMHYACMVELLGREGLLDEAYELIRSAPFKPTTNMW 491
Query: 400 GSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKR 459
+LL ACR H L+L ++AA+ L +EP+ YI+L N+Y S G+ + A + + ++++
Sbjct: 492 ATLLTACRMHENLELGKLAAENLYGMEPEKLCNYIVLLNLYNSSGKLKEAAGVLQTLKRK 551
Query: 460 NVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREA---GYCPDSSFV 516
+ P C+WIEV+K+ + F D H + EK+ ++ E GY ++ +
Sbjct: 552 GLRMLPACTWIEVKKQSYAFLCGD----KSHSQTKEIYEKVNNMMVEISRHGYVEENKAL 607
Query: 517 LHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGR 576
L DVDEEE+ L+YHSEKLA+A+GL+ P P+++ + RVCGDCHSAIK I+ V GR
Sbjct: 608 LPDVDEEEQ-RILKYHSEKLAIAFGLINTPHWTPLQITQGHRVCGDCHSAIKFIAMVTGR 666
Query: 577 EIILRDANRFHHFKDGLCSCRDYW 600
EI++RDA+RFHHF+DG CSC DYW
Sbjct: 667 EIVVRDASRFHHFRDGSCSCGDYW 690
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 123/287 (42%), Gaps = 47/287 (16%)
Query: 16 YVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQ---- 71
+V+ G++ +A LF +MPEK++ SW M+GGF+ +A LF M E+ +
Sbjct: 162 HVKCGLMLDARKLFDEMPEKDMASWMTMIGGFVDSGNFSEAFGLFLCMWEEFNDGRSRTF 221
Query: 72 TNMVLGYCQDGRVDEGREIFDEMPKKNVISWT----TMISGYVNNNRIDVARKLFEVMPE 127
T M+ G V GR+I K+ V T +I Y I+ A +F+ MPE
Sbjct: 222 TTMIRASAGLGLVQVGRQIHSCALKRGVGDDTFVSCALIDMYSKCGSIEDAHCVFDQMPE 281
Query: 128 KNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKS--------------------------- 160
K V W +++ Y G ++A + M
Sbjct: 282 KTTVGWNSIIASYALHGYSEEALSFYYEMRDSGAKIDHFTISIVIRICARLASLEYAKQA 341
Query: 161 ------------VVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYE 208
+VA+ +++ + G ++ A VF++MR K+ +W+ +I Y G
Sbjct: 342 HAALVRRGYDTDIVANTALVDFYSKWGRMEDAWHVFNRMRRKNVISWNALIAGYGNHGQG 401
Query: 209 LEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVR 255
E +++F M +EG+ N + ++VLS C+ + G ++ + R
Sbjct: 402 EEAVEMFEQMLREGMIPNHVTFLAVLSACSYSGLSERGWEIFYSMSR 448
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 105/234 (44%), Gaps = 47/234 (20%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEK----NVVSWTVMLGGFIRDSRIDDA 56
MPE+++ SW M+ G+V+ G +EA LF M E+ ++T M+ +
Sbjct: 178 MPEKDMASWMTMIGGFVDSGNFSEAFGLFLCMWEEFNDGRSRTFTTMIRASAGLGLVQVG 237
Query: 57 RRLFDMMPEK----DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
R++ ++ D ++ Y + G +++ +FD+MP+K + W ++I+ Y +
Sbjct: 238 RQIHSCALKRGVGDDTFVSCALIDMYSKCGSIEDAHCVFDQMPEKTTVGWNSIIASYALH 297
Query: 113 NRIDVARKLFEVMPEKNE---------------------------------------VSW 133
+ A + M + V+
Sbjct: 298 GYSEEALSFYYEMRDSGAKIDHFTISIVIRICARLASLEYAKQAHAALVRRGYDTDIVAN 357
Query: 134 TAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQM 187
TA++ Y++ GR++DAW +F M K+V++ N++I G G +G+ ++A +F+QM
Sbjct: 358 TALVDFYSKWGRMEDAWHVFNRMRRKNVISWNALIAGYGNHGQGEEAVEMFEQM 411
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 126/291 (43%), Gaps = 40/291 (13%)
Query: 210 EVIDLFTLMQKE--GVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASV 267
E ++LF +++ E G V + +++S C L S+ ++V +V F+ D+YV +
Sbjct: 98 EAMELFEILELEHDGFDVGGSTYDALVSACVGLRSIRGVKRVFNYMVNSGFEPDLYVMNR 157
Query: 268 LITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPD 327
++ +++KCG ++ + +FD KD+ W ++I G+ G ++ +F M+
Sbjct: 158 VLFVHVKCGLMLDARKLFDEMPEKDMASWMTMIGGFVDSGNFSEAFGLFLCMWEEFNDGR 217
Query: 328 DVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLI 387
T ++ A + G V+ GR+I S K V T ++D+ + G +EDA +
Sbjct: 218 SRTFTTMIRASAGLGLVQVGRQI-HSCALKRGVGDDTFVSCALIDMYSKCGSIEDAHCVF 276
Query: 388 EAMPFEPDAIIWGSLL----------------------GACRTHMKLDLAEVAAKKLLQL 425
+ MP E + W S++ GA H + + +L L
Sbjct: 277 DQMP-EKTTVGWNSIIASYALHGYSEEALSFYYEMRDSGAKIDHFTISIVIRICARLASL 335
Query: 426 E-PKNAGPYIL-------------LSNIYASQGRFHDVAELRKNMRKRNVI 462
E K A ++ L + Y+ GR D + MR++NVI
Sbjct: 336 EYAKQAHAALVRRGYDTDIVANTALVDFYSKWGRMEDAWHVFNRMRRKNVI 386
Score = 47.4 bits (111), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 74/161 (45%), Gaps = 12/161 (7%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDM 62
+ ++V+ TA+V Y + G + +A +F +M KNV+SW ++ G+ + ++A +F+
Sbjct: 351 DTDIVANTALVDFYSKWGRMEDAWHVFNRMRRKNVISWNALIAGYGNHGQGEEAVEMFEQ 410
Query: 63 MPEKDVVAQTNM---VLGYCQ-DGRVDEGREIF-----DEMPKKNVISWTTMISGYVNNN 113
M + ++ VL C G + G EIF D K + + M+
Sbjct: 411 MLREGMIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMVELLGREG 470
Query: 114 RIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFK 154
+D A +L P K + A L+ T C R+ + EL K
Sbjct: 471 LLDEAYELIRSAPFKPTTNMWATLL--TAC-RMHENLELGK 508
>gi|15227724|ref|NP_178481.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206038|sp|Q9SI53.1|PP147_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g03880, mitochondrial; Flags: Precursor
gi|4582435|gb|AAD24821.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|330250668|gb|AEC05762.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 630
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 216/534 (40%), Positives = 317/534 (59%), Gaps = 39/534 (7%)
Query: 103 TTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAM------ 156
+I+ YV N ++ A +LF+ MP++N +SWT M+ Y++C Q A EL M
Sbjct: 100 NVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVR 159
Query: 157 ----PMKSVVAS--------------------------NSMILGLGQNGEVQKARVVFDQ 186
SV+ S +++I + GE + A VFD+
Sbjct: 160 PNVYTYSSVLRSCNGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDE 219
Query: 187 MREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHG 246
M D W+ +I + + ++LF M++ G +L SVL C LA L+ G
Sbjct: 220 MVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELG 279
Query: 247 RQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQY 306
Q H +V+ +D D+ + + L+ MY KCG L +F+ +D++ W+++ISG AQ
Sbjct: 280 MQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQN 337
Query: 307 GLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEH 366
G +++LK+F M SSG P+ +T+VGVL ACS+ G +++G F SMK Y ++P EH
Sbjct: 338 GYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREH 397
Query: 367 YACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLE 426
Y CM+DLLG+AG+++DA+KL+ M EPDA+ W +LLGACR + LAE AAKK++ L+
Sbjct: 398 YGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALD 457
Query: 427 PKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVS 486
P++AG Y LLSNIYA+ ++ V E+R MR R + K PGCSWIEV K++H F D S
Sbjct: 458 PEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGD-NS 516
Query: 487 HPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLP 546
HP+ + + L ++ L GY P+++FVL D++ E+ SLR+HSEKLA+A+GL+ LP
Sbjct: 517 HPQIVEVSKKLNQLIHRLTGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAFGLMTLP 576
Query: 547 EGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
IR+ KNLR+CGDCH KL SK+ R I++RD R+HHF+DG CSC DYW
Sbjct: 577 IEKVIRIRKNLRICGDCHVFCKLASKLEIRSIVIRDPIRYHHFQDGKCSCGDYW 630
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 125/257 (48%), Gaps = 11/257 (4%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSR-IDDARRL 59
MP+RNV+SWT M+ Y + + +A L M NV +R + D R L
Sbjct: 122 MPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDVRML 181
Query: 60 FDMMP----EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRI 115
+ E DV ++ ++ + + G ++ +FDEM + I W ++I G+ N+R
Sbjct: 182 HCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRS 241
Query: 116 DVARKLFEVMPE----KNEVSWTAMLMGYTQCGRIQDAWELFKAMPM--KSVVASNSMIL 169
DVA +LF+ M + + T++L T ++ + + + ++ +N+++
Sbjct: 242 DVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYDQDLILNNALVD 301
Query: 170 GLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPS 229
+ G ++ A VF+QM+E+D TWS MI + GY E + LF M+ G + N+ +
Sbjct: 302 MYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYIT 361
Query: 230 LISVLSVCASLASLDHG 246
++ VL C+ L+ G
Sbjct: 362 IVGVLFACSHAGLLEDG 378
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 111/246 (45%), Gaps = 51/246 (20%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDM 62
E +V +A++ + + G +A ++F +M + + W ++GGF ++SR D A LF
Sbjct: 191 ESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKR 250
Query: 63 MP-------------------------------------EKDVVAQTNMVLGYCQDGRVD 85
M ++D++ +V YC+ G ++
Sbjct: 251 MKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYDQDLILNNALVDMYCKCGSLE 310
Query: 86 EGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVM----PEKNEVSWTAMLMGYT 141
+ +F++M +++VI+W+TMISG N A KLFE M + N ++ +L +
Sbjct: 311 DALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACS 370
Query: 142 QCGRIQDAWELFKAM-------PMKSVVASNSMILGLGQNGEVQKARVVFDQMR-EKDDA 193
G ++D W F++M P++ MI LG+ G++ A + ++M E D
Sbjct: 371 HAGLLEDGWYYFRSMKKLYGIDPVRE--HYGCMIDLLGKAGKLDDAVKLLNEMECEPDAV 428
Query: 194 TWSGMI 199
TW ++
Sbjct: 429 TWRTLL 434
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 97/206 (47%), Gaps = 21/206 (10%)
Query: 218 MQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGE 277
+Q G+ + + ++ C S ++ G + L +++ +VLI MY+K
Sbjct: 52 LQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNL 111
Query: 278 LVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSA 337
L +FD ++++ W ++IS Y++ + +K+L++ M V P+ T VL +
Sbjct: 112 LNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRS 171
Query: 338 CS--------YTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEA 389
C+ + G +KEG E S V + ++D+ + G+ EDA+ + +
Sbjct: 172 CNGMSDVRMLHCGIIKEGLE------SDVFVR------SALIDVFAKLGEPEDALSVFDE 219
Query: 390 MPFEPDAIIWGSLLGACRTHMKLDLA 415
M DAI+W S++G + + D+A
Sbjct: 220 M-VTGDAIVWNSIIGGFAQNSRSDVA 244
>gi|125551253|gb|EAY96962.1| hypothetical protein OsI_18881 [Oryza sativa Indica Group]
Length = 822
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 230/621 (37%), Positives = 353/621 (56%), Gaps = 37/621 (5%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRL--- 59
E+ VV WT ++ YV+ EA LF E + I + RL
Sbjct: 216 EKTVVVWTLLISRYVQGECAEEAVELFLDFLEDGFEPDRYTMSSMISACTELGSVRLGLQ 275
Query: 60 -----FDMMPEKDVVAQTNMVLGYCQDG---RVDEGREIFDEMPKKNVISWTTMISGYVN 111
M D +V Y + +D ++F+ MPK +VISWT +ISGYV
Sbjct: 276 LHSLALRMGLASDACVSCGLVDMYAKSNIGQAMDYANKVFERMPKNDVISWTALISGYVQ 335
Query: 112 -----NNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRI--QDAWELFKAMPMKSVVAS 164
N + + ++ + N ++++++L C I D+ A +KS AS
Sbjct: 336 SGVQENKVMALFGEMLNESIKPNHITYSSIL---KSCASISDHDSGRQVHAHVIKSNQAS 392
Query: 165 -----NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQ 219
N+++ ++G +++AR VF+Q+ E+ S + + E + + L+ +
Sbjct: 393 AHTVGNALVSMYAESGCMEEARRVFNQLYER-----SMIPCITEGRDFPLD-----HRIV 442
Query: 220 KEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELV 279
+ V ++ + S++S AS+ L G+Q+HA ++ F D +V++ L++MY +CG L
Sbjct: 443 RMDVGISSSTFASLISAAASVGMLTKGQQLHAMSLKAGFGSDRFVSNSLVSMYSRCGYLE 502
Query: 280 KGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACS 339
F+ ++++ W S+ISG A++G E++L +FH+M +GV P+DVT + VLSACS
Sbjct: 503 DACRSFNELKDRNVISWTSMISGLAKHGYAERALSLFHDMILTGVKPNDVTYIAVLSACS 562
Query: 340 YTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIW 399
+ G V+EG+E F SM+ + + P+ EHYACMVDLL R+G V++A++ I MP + DA++W
Sbjct: 563 HVGLVREGKEYFRSMQRDHGLIPRMEHYACMVDLLARSGIVKEALEFINEMPLKADALVW 622
Query: 400 GSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKR 459
+LLGACR+H +++ E+ AK +++LEP++ PY+LLSN+YA G + +VA +R MR
Sbjct: 623 KTLLGACRSHDNIEVGEITAKNVVELEPRDPAPYVLLSNLYADAGLWDEVARIRSAMRDN 682
Query: 460 NVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHD 519
N+ K G SW+EVE H F D SHP I L+ + ++ GY PD+S VLHD
Sbjct: 683 NLNKETGLSWMEVENTTHEFRAGD-TSHPRAQDIYGKLDTLVRQIKGMGYVPDTSIVLHD 741
Query: 520 VDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREII 579
+ +E K L HSEK+AVA+GL+ PIR+ KNLRVC DCHSAIK +SK REII
Sbjct: 742 MSDELKEQYLLQHSEKIAVAFGLITTSAPKPIRIFKNLRVCADCHSAIKYMSKATRREII 801
Query: 580 LRDANRFHHFKDGLCSCRDYW 600
LRD+NRFH KDG CSC +YW
Sbjct: 802 LRDSNRFHRMKDGECSCGEYW 822
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 87/389 (22%), Positives = 177/389 (45%), Gaps = 52/389 (13%)
Query: 67 DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLF---- 122
DV + ++ ++G + R++FD + +K V+ WT +IS YV + A +LF
Sbjct: 187 DVAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVELFLDFL 246
Query: 123 EVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMI----------LGLG 172
E E + + ++M+ T+ G ++ +L ++ ++ +AS++ + +G
Sbjct: 247 EDGFEPDRYTMSSMISACTELGSVRLGLQL-HSLALRMGLASDACVSCGLVDMYAKSNIG 305
Query: 173 QNGEVQKARVVFDQMREKDDATWSGMIKVYERKGY-ELEVIDLFTLMQKEGVRVNFPSLI 231
Q + A VF++M + D +W+ +I Y + G E +V+ LF M E ++ N +
Sbjct: 306 Q--AMDYANKVFERMPKNDVISWTALISGYVQSGVQENKVMALFGEMLNESIKPNHITYS 363
Query: 232 SVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASK 291
S+L CAS++ D GRQVHA +++ V + L++MY + G + + + +F+ +
Sbjct: 364 SILKSCASISDHDSGRQVHAHVIKSNQASAHTVGNALVSMYAESGCMEEARRVFNQLYER 423
Query: 292 DIV-------------------------MWNSIISGYAQYGLGEKSLKVFHEMFSSGVMP 326
++ + S+IS A G+ K ++ +G
Sbjct: 424 SMIPCITEGRDFPLDHRIVRMDVGISSSTFASLISAAASVGMLTKGQQLHAMSLKAGFGS 483
Query: 327 DDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKL 386
D ++S S G +++ F +K + ++ + M+ L + G E A+ L
Sbjct: 484 DRFVSNSLVSMYSRCGYLEDACRSFNELKDRNVIS-----WTSMISGLAKHGYAERALSL 538
Query: 387 IEAMPF---EPDAIIWGSLLGACRTHMKL 412
M +P+ + + ++L AC +H+ L
Sbjct: 539 FHDMILTGVKPNDVTYIAVLSAC-SHVGL 566
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 118/251 (47%), Gaps = 8/251 (3%)
Query: 159 KSVVASNSMILGLGQNGEVQKARVVFDQMRE-KDDATWSGMIKVYERKGYELEVIDLFTL 217
+ V +NS++ + G V AR VFD MR +D +W+ M R G E + L
Sbjct: 82 RDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTAMASCLARNGAERGSLLLIGE 141
Query: 218 MQKEGVRVNFPSLISVLSVC--ASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKC 275
M + G+ N +L + C L L G + + DV V S LI M +
Sbjct: 142 MLESGLLPNAYTLCAAAHACFPHELYCLVGGVVLGLVHKMGLWGTDVAVGSALIDMLARN 201
Query: 276 GELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVL 335
G+L + +FD K +V+W +IS Y Q E+++++F + G PD T+ ++
Sbjct: 202 GDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVELFLDFLEDGFEPDRYTMSSMI 261
Query: 336 SACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRA--GQVED-AMKLIEAMPF 392
SAC+ G V+ G ++ S+ + + +VD+ ++ GQ D A K+ E MP
Sbjct: 262 SACTELGSVRLGLQL-HSLALRMGLASDACVSCGLVDMYAKSNIGQAMDYANKVFERMP- 319
Query: 393 EPDAIIWGSLL 403
+ D I W +L+
Sbjct: 320 KNDVISWTALI 330
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 132/272 (48%), Gaps = 27/272 (9%)
Query: 1 MPERNVVSWTAMVRGYVEEGMI-TEAGTLFWQMPEKNV----VSWTVMLGGFIRDSRIDD 55
MP+ +V+SWTA++ GYV+ G+ + LF +M +++ ++++ +L S D
Sbjct: 318 MPKNDVISWTALISGYVQSGVQENKVMALFGEMLNESIKPNHITYSSILKSCASISDHDS 377
Query: 56 ARRLF-DMMPEKDVVAQT---NMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVN 111
R++ ++ A T +V Y + G ++E R +F+++ ++++I T +
Sbjct: 378 GRQVHAHVIKSNQASAHTVGNALVSMYAESGCMEEARRVFNQLYERSMIPCITEGRDFPL 437
Query: 112 NNRI---DVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVA----- 163
++RI DV + ++ +++ G + +L AM +K+
Sbjct: 438 DHRIVRMDVG---------ISSSTFASLISAAASVGMLTKGQQL-HAMSLKAGFGSDRFV 487
Query: 164 SNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGV 223
SNS++ + G ++ A F+++++++ +W+ MI + GY + LF M GV
Sbjct: 488 SNSLVSMYSRCGYLEDACRSFNELKDRNVISWTSMISGLAKHGYAERALSLFHDMILTGV 547
Query: 224 RVNFPSLISVLSVCASLASLDHGRQVHAQLVR 255
+ N + I+VLS C+ + + G++ + R
Sbjct: 548 KPNDVTYIAVLSACSHVGLVREGKEYFRSMQR 579
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 76/164 (46%), Gaps = 10/164 (6%)
Query: 246 GRQVHAQLVRCQF-DVDVYVASVLITMYIKCGELVKGKLIFDNFAS-KDIVMWNSIISGY 303
GR +H +L+R D D VA+ L+T+Y +CG + + +FD +DIV W ++ S
Sbjct: 67 GRALHRRLLRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTAMASCL 126
Query: 304 AQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACS----YTGKVKEGREIFESMKSKYL 359
A+ G SL + EM SG++P+ TL AC Y + M L
Sbjct: 127 ARNGAERGSLLLIGEMLESGLLPNAYTLCAAAHACFPHELYCLVGGVVLGLVHKMG---L 183
Query: 360 VEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
+ ++D+L R G + A K+ + + E ++W L+
Sbjct: 184 WGTDVAVGSALIDMLARNGDLASARKVFDGL-IEKTVVVWTLLI 226
>gi|357167843|ref|XP_003581359.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like, partial [Brachypodium distachyon]
Length = 745
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 235/625 (37%), Positives = 355/625 (56%), Gaps = 36/625 (5%)
Query: 2 PERNVVSWTAMVRGYVEEGMITEAGTLFWQM-------PEKNVVSWTVMLGGFIRDSRID 54
P R+ S+ ++R ++ G +A LF +M P+++ V+ TV + D +
Sbjct: 131 PPRSARSYNILIRSFLRAGHPEDALHLFVEMLDDTAVSPDQHTVANTVKSCSRMCDLSVG 190
Query: 55 DARRLF----DMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYV 110
+ + M ++ V+ +++ Y G V +F + K VI+W MI+GYV
Sbjct: 191 RGVQAYAFKRGFMVDQFVL--NSLIHMYASCGDVVAAHVLFHTVQVKGVIAWNAMIAGYV 248
Query: 111 NNNR----IDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDA----WELFKAMPMKSVV 162
N +++ + + EV +EV+ +L T CGR+ DA W + + K ++
Sbjct: 249 KNGDWKEVVEMFKGMLEVRAPFDEVT---LLSVATACGRLGDANLGQW-IAEYAEEKGML 304
Query: 163 ASNSMILGL----GQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLM 218
S ++ L + GE+ KAR +FD+M +D WS MI Y + E + +F M
Sbjct: 305 RSRNLATALVDMYAKCGELDKARRLFDRMHSRDVVAWSAMISGYTQSDRCREALAIFNEM 364
Query: 219 QKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGEL 278
Q V N +++SVLS CA L +L+ G+ VH+ + R + V + + L+ Y KCG +
Sbjct: 365 QGTEVNPNDVTMVSVLSACAVLGALETGKWVHSYIRRKDLPLTVILGTALVDFYAKCGCI 424
Query: 279 VKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSAC 338
F++ ++ W ++I G A G ++L++F M + + P DVT +GVL AC
Sbjct: 425 KDAVKAFESMPVRNTWTWTALIKGMASNGRSREALELFSSMLEANIEPTDVTFIGVLLAC 484
Query: 339 SYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAII 398
S+ V+EGR F SM Y + P+ EHY CMVDLLGRAG +++A + I MP EP+A++
Sbjct: 485 SHGCLVEEGRRHFTSMTQDYGICPRIEHYGCMVDLLGRAGLIDEAYQFIRNMPIEPNAVV 544
Query: 399 WGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRK 458
W +LL AC H +++ E A K+++ L+P ++G YILLSN YAS G++ + A +RK M++
Sbjct: 545 WRALLSACTVHKNVEIGEEALKQIVPLDPCHSGNYILLSNTYASVGQWKNAAMVRKEMKE 604
Query: 459 RNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLRE---AGYCPDSSF 515
+ V K PGCS IE+E + F D EHP + + EK+ ++ GY P+++
Sbjct: 605 KGVEKIPGCSLIELEGTIFEFFAED----SEHPQLTEIYEKVHEMIENIKMVGYIPNTAD 660
Query: 516 VLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMG 575
DVDE EK S+ +HSEKLA+A+GL+K G IR+ KNLRVC DCHSA KLISKV
Sbjct: 661 ARLDVDEYEKQVSVSHHSEKLAIAFGLMKSRPGATIRLSKNLRVCIDCHSATKLISKVYN 720
Query: 576 REIILRDANRFHHFKDGLCSCRDYW 600
REII+RD NRFHHFKDGLCSC DYW
Sbjct: 721 REIIVRDRNRFHHFKDGLCSCNDYW 745
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 95/217 (43%), Gaps = 18/217 (8%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMP----EKNVVSWTVMLGGFIRDSRIDDA 56
M R+VV+W+AM+ GY + EA +F +M N V+ +L ++
Sbjct: 333 MHSRDVVAWSAMISGYTQSDRCREALAIFNEMQGTEVNPNDVTMVSVLSACAVLGALETG 392
Query: 57 RRLFDMMPEKD----VVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+ + + KD V+ T +V Y + G + + + F+ MP +N +WT +I G +N
Sbjct: 393 KWVHSYIRRKDLPLTVILGTALVDFYAKCGCIKDAVKAFESMPVRNTWTWTALIKGMASN 452
Query: 113 NRIDVARKLFEVMPEKN----EVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVAS---- 164
R A +LF M E N +V++ +L+ + +++ F +M +
Sbjct: 453 GRSREALELFSSMLEANIEPTDVTFIGVLLACSHGCLVEEGRRHFTSMTQDYGICPRIEH 512
Query: 165 -NSMILGLGQNGEVQKARVVFDQMR-EKDDATWSGMI 199
M+ LG+ G + +A M E + W ++
Sbjct: 513 YGCMVDLLGRAGLIDEAYQFIRNMPIEPNAVVWRALL 549
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 74/174 (42%), Gaps = 13/174 (7%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFI----RDSRIDDA 56
MP RN +WTA+++G G EA LF M E N+ V G + +++
Sbjct: 434 MPVRNTWTWTALIKGMASNGRSREALELFSSMLEANIEPTDVTFIGVLLACSHGCLVEEG 493
Query: 57 RRLFDMMPEKDVVAQTNMVLGYCQD-----GRVDEGREIFDEMP-KKNVISWTTMISGYV 110
RR F M + + G D G +DE + MP + N + W ++S
Sbjct: 494 RRHFTSMTQDYGICPRIEHYGCMVDLLGRAGLIDEAYQFIRNMPIEPNAVVWRALLSACT 553
Query: 111 NNNRIDVARK-LFEVMPEKNEVSWTAMLMG--YTQCGRIQDAWELFKAMPMKSV 161
+ +++ + L +++P S +L+ Y G+ ++A + K M K V
Sbjct: 554 VHKNVEIGEEALKQIVPLDPCHSGNYILLSNTYASVGQWKNAAMVRKEMKEKGV 607
>gi|147843467|emb|CAN82070.1| hypothetical protein VITISV_010010 [Vitis vinifera]
Length = 1005
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 233/650 (35%), Positives = 353/650 (54%), Gaps = 57/650 (8%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDM 62
+ +++ T ++ Y + G +A LFW + +++V+W+ ++ ++ ++A LF
Sbjct: 361 DSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQE 420
Query: 63 MPEKDVVAQ--TNM-VLGYCQD-GRVDEGREIFDEMPKKNVIS----WTTMISGYVNNNR 114
M + + T M +L C D + G+ I K ++ S T ++S Y
Sbjct: 421 MQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGF 480
Query: 115 IDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELF----------KAMPMKSVVAS 164
A F M ++ V+W +++ GY Q G +A ++F A M VV +
Sbjct: 481 FTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPA 540
Query: 165 NSMILGLGQN-----------------------------GEVQKARVVFDQMR-EKDDAT 194
+++ L Q G + A +F++ KD+ T
Sbjct: 541 CALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVT 600
Query: 195 WSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLV 254
W+ +I Y + G+ E I F M+ E N + +SVL A LA+ G HA ++
Sbjct: 601 WNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACII 660
Query: 255 RCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLK 314
+ F + V + LI MY KCG+L + +F+ KD V WN+++SGYA +G G++++
Sbjct: 661 QMGFLSNTLVGNSLIDMYAKCGQLXYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIA 720
Query: 315 VFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLL 374
+F M S V D V+ V VLSAC + G V+EGR+IF SM KY ++P EHYACMVDLL
Sbjct: 721 LFSLMQESQVQIDSVSFVSVLSACRHXGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLL 780
Query: 375 GRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYI 434
GRAG ++ + I+ MP EPDA +WG+LLG+CR H + L EVA L++LEP+N ++
Sbjct: 781 GRAGLFDETLGFIKVMPVEPDAGVWGALLGSCRMHSNVKLGEVALDHLVKLEPRNPAHFV 840
Query: 435 LLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPE----H 490
+LS+IYA GR+ D + R M + K PGCSW+E++ KVH F D SHP+ H
Sbjct: 841 VLSSIYAQSGRWADAGKARSKMNDLGLKKTPGCSWVELKNKVHAFRVGD-KSHPQLESMH 899
Query: 491 PMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVP 550
+ +LEK + + GY PD S VL +V+EE+K L HSE+LA+ + L+ P G
Sbjct: 900 LLWNTLLEK----MEKIGYVPDRSCVLQNVEEEDKEMFLYSHSERLAITFALLNTPPGST 955
Query: 551 IRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
I+++KNLRVC DCH+ K ISK+ R II+RDA RFHHF+DG+CSC DYW
Sbjct: 956 IQIVKNLRVCADCHTTTKFISKITTRRIIVRDATRFHHFEDGICSCNDYW 1005
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 126/475 (26%), Positives = 219/475 (46%), Gaps = 49/475 (10%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDM 62
ER+V +V Y + G + A +F +MP+++VV+W M+ G + +A F
Sbjct: 161 ERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRS 220
Query: 63 MP----EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTT--MISGYVNNNRID 116
M E V+ N+ G C+ ++ R I + +++ S + +I Y +D
Sbjct: 221 MQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFSSAVSNGLIDLYSKCGDVD 280
Query: 117 VARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSV----VASNSMILGLG 172
VAR++F+ M ++++VSW M+ GY G + ELF M + +V V++ S L
Sbjct: 281 VARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAA 340
Query: 173 QN-----------------------------------GEVQKARVVFDQMREKDDATWSG 197
+ GE +KA+ +F ++ +D WS
Sbjct: 341 ETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSA 400
Query: 198 MIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQ 257
+I + GY E + LF MQ + ++ N +L+S+L CA L+ L G+ +H V+
Sbjct: 401 IIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKAD 460
Query: 258 FDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFH 317
D D+ + L++MY KCG F+ +S+DIV WNS+I+GYAQ G ++ +F+
Sbjct: 461 MDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFY 520
Query: 318 EMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRA 377
++ S + PD T+VGV+ AC+ + +G I + K E ++D+ +
Sbjct: 521 KLRLSAINPDAGTMVGVVPACALLNDLDQGTCI-HGLIVKLGFESDCHVKNALIDMYAKC 579
Query: 378 GQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGP 432
G + A L F D + W ++ A +M+ A+ A Q+ +N P
Sbjct: 580 GSLPSAEFLFNKTDFTKDEVTWNVIIAA---YMQNGHAKEAISSFHQMRLENFHP 631
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 116/418 (27%), Positives = 199/418 (47%), Gaps = 16/418 (3%)
Query: 2 PERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV----VSWTVMLGGFIRDSRIDDAR 57
P + + W +M+R Y EA +++ M EK + ++T +L + +
Sbjct: 90 PNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGV 149
Query: 58 RLFDMMP----EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNN 113
+ E+DV +V Y + G + RE+FD+MPK++V++W MI+G +
Sbjct: 150 WFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSE 209
Query: 114 ----RIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMK--SVVASNSM 167
+D R + V E + VS + G + I+ + + + S SN +
Sbjct: 210 DPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFSSAVSNGL 269
Query: 168 ILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNF 227
I + G+V AR VFDQM ++DD +W M+ Y G +EV++LF M+ VR+N
Sbjct: 270 IDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINK 329
Query: 228 PSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDN 287
S +S A L+ G+++H ++ + D D+ VA+ L+ MY KCGE K K +F
Sbjct: 330 VSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWG 389
Query: 288 FASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEG 347
+D+V W++II+ Q G E++L +F EM + + P+ VTL+ +L AC+ +K G
Sbjct: 390 LQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLG 449
Query: 348 REIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
+ I K ++ +V + + G A+ M D + W SL+
Sbjct: 450 KSI-HCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMS-SRDIVTWNSLING 505
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/347 (24%), Positives = 167/347 (48%), Gaps = 22/347 (6%)
Query: 72 TNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEK--- 128
T+++ Y + D R +FD P + I W +MI Y + + + A +++ M EK
Sbjct: 67 THLINLYSLFHKCDLARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLE 126
Query: 129 -NEVSWTAMLMGYTQCGRIQDA-W---ELFKAMPMKSVVASNSMILGLGQNGEVQKARVV 183
++ ++T +L T +Q+ W E+ + + V ++ + G++++AR V
Sbjct: 127 PDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREV 186
Query: 184 FDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASL 243
FD+M ++D W+ MI + E +D F MQ GV + SL+++ L+++
Sbjct: 187 FDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNI 246
Query: 244 DHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGY 303
+ R +H + R D V++ LI +Y KCG++ + +FD +D V W ++++GY
Sbjct: 247 ELCRSIHGYVFR--RDFSSAVSNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGY 304
Query: 304 AQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIF-----ESMKSKY 358
A G + L++F +M V + V+ V A + T +++G+EI + + S
Sbjct: 305 AHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDI 364
Query: 359 LVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
LV ++ + + G+ E A +L + D + W +++ A
Sbjct: 365 LVATP------LMVMYAKCGETEKAKQLFWGLQGR-DLVAWSAIIAA 404
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 92/192 (47%), Gaps = 21/192 (10%)
Query: 227 FPSLIS-----------VLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASV--LITMYI 273
FPSL S +LS C L L Q+HAQ++ F + + L +++
Sbjct: 21 FPSLSSSTYTNYLHYPRLLSSCKHLNPL---LQIHAQIIVSGFKHHHSITHLINLYSLFH 77
Query: 274 KCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVG 333
KC +L + +FD+ + ++WNS+I Y + ++L++++ M G+ PD T
Sbjct: 78 KC-DLARS--VFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTF 134
Query: 334 VLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFE 393
VL AC+ ++EG + + L E A +VD+ + G ++ A ++ + MP +
Sbjct: 135 VLKACTGALNLQEGVWFHGEIDRRGL-ERDVFIGAGLVDMYSKMGDLKRAREVFDKMP-K 192
Query: 394 PDAIIWGSLLGA 405
D + W +++
Sbjct: 193 RDVVAWNAMIAG 204
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 64/162 (39%), Gaps = 13/162 (8%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV----VSWTVMLGGFIRDSRIDDA 56
M ++ VSW AM+ GY G A LF M E V VS+ +L +++
Sbjct: 694 MDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHXGLVEEG 753
Query: 57 RRLFDMMPEK-----DVVAQTNMVLGYCQDGRVDEGREIFDEMP-KKNVISWTTMISG-- 108
R++F M +K D+ MV + G DE MP + + W ++
Sbjct: 754 RKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALLGSCR 813
Query: 109 -YVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDA 149
+ N +VA + +N + + Y Q GR DA
Sbjct: 814 MHSNVKLGEVALDHLVKLEPRNPAHFVVLSSIYAQSGRWADA 855
>gi|242079983|ref|XP_002444760.1| hypothetical protein SORBIDRAFT_07g027560 [Sorghum bicolor]
gi|241941110|gb|EES14255.1| hypothetical protein SORBIDRAFT_07g027560 [Sorghum bicolor]
Length = 650
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 215/539 (39%), Positives = 329/539 (61%), Gaps = 9/539 (1%)
Query: 68 VVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVN-NNRIDVARKLFEVM- 125
+ ++V Y + G +D+ +FD MP++NV++WTT+++ N + R + A + M
Sbjct: 115 IFVSNSLVSMYAKFGLLDDALRLFDRMPERNVVTWTTVVAALANADGRKEEALRFLVAMW 174
Query: 126 ---PEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKS-VVASNSMILGLGQNGEVQKAR 181
N +++++L G + + + S V +S+I + G++ R
Sbjct: 175 RDGVAPNAYTFSSVLGACGTPGVLAALHASTVKVGLDSDVFVRSSLIDAYMKLGDLDGGR 234
Query: 182 VVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLA 241
VFD+M +D W+ +I + + G + I+LF M+ G N +L SVL C +
Sbjct: 235 RVFDEMVTRDLVVWNSIIAGFAQSGDGVGAIELFMRMKDAGFSANQGTLTSVLRACTGMV 294
Query: 242 SLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIIS 301
L+ GRQVHA +++ ++ D+ + + L+ MY KCG L + +F +D++ W+++IS
Sbjct: 295 MLEAGRQVHAHVLK--YERDLILHNALLDMYCKCGSLEDAEALFHRMPQRDVISWSTMIS 352
Query: 302 GYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVE 361
G AQ G ++L+VF M S GV P+ +T+VGVL ACS+ G V++G F SMK + ++
Sbjct: 353 GLAQNGKSAEALRVFDLMKSEGVAPNRITMVGVLFACSHAGLVEDGWYYFRSMKKLFGIQ 412
Query: 362 PKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKK 421
P+ EH+ CMVDLLGRAG++++A++ I M EPDA+IW +LLGACR H +LA AA++
Sbjct: 413 PEREHHNCMVDLLGRAGKLDEAVEFIRDMNLEPDAVIWRTLLGACRMHKSGNLAAYAARE 472
Query: 422 LLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTG 481
+L+LEP + G +LLSN YA ++ D + K MR R + K PG SWIE+EK VH+F
Sbjct: 473 ILKLEPDDQGARVLLSNTYADLRQWTDAEKSWKAMRDRGMKKEPGRSWIELEKHVHVFIA 532
Query: 482 RDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYG 541
D +SHP I++ L ++ G + GY P + FVL D+ E+K L+YHSEK+A+A+G
Sbjct: 533 GD-LSHPCSDTIVQELNRLIGRISALGYVPQTEFVLQDLAIEQKEDLLKYHSEKMAIAFG 591
Query: 542 LVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
+ G PIR+MKNLR+CGDCH+ KL+SK GR II+RD RFHHF+DG CSC DYW
Sbjct: 592 TMHAVGGKPIRIMKNLRICGDCHAFAKLVSKSEGRMIIIRDPVRFHHFQDGACSCGDYW 650
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 111/255 (43%), Gaps = 74/255 (29%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIR-DSRIDDARRLFDMM----- 63
++V Y + G++ +A LF +MPE+NVV+WT ++ D R ++A R M
Sbjct: 119 NSLVSMYAKFGLLDDALRLFDRMPERNVVTWTTVVAALANADGRKEEALRFLVAMWRDGV 178
Query: 64 -P------------------------------EKDVVAQTNMVLGYCQDGRVDEGREIFD 92
P + DV +++++ Y + G +D GR +FD
Sbjct: 179 APNAYTFSSVLGACGTPGVLAALHASTVKVGLDSDVFVRSSLIDAYMKLGDLDGGRRVFD 238
Query: 93 EMPKKNVISWTTMISGYVNNNRIDVARKLFEVMP-------------------------- 126
EM ++++ W ++I+G+ + A +LF M
Sbjct: 239 EMVTRDLVVWNSIIAGFAQSGDGVGAIELFMRMKDAGFSANQGTLTSVLRACTGMVMLEA 298
Query: 127 -----------EKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNG 175
E++ + A+L Y +CG ++DA LF MP + V++ ++MI GL QNG
Sbjct: 299 GRQVHAHVLKYERDLILHNALLDMYCKCGSLEDAEALFHRMPQRDVISWSTMISGLAQNG 358
Query: 176 EVQKARVVFDQMREK 190
+ +A VFD M+ +
Sbjct: 359 KSAEALRVFDLMKSE 373
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 104/215 (48%), Gaps = 16/215 (7%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSR----IDDA 56
M R++V W +++ G+ + G A LF +M + + L +R ++
Sbjct: 240 MVTRDLVVWNSIIAGFAQSGDGVGAIELFMRMKDAGFSANQGTLTSVLRACTGMVMLEAG 299
Query: 57 RRLFD--MMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNR 114
R++ + E+D++ ++ YC+ G +++ +F MP+++VISW+TMISG N +
Sbjct: 300 RQVHAHVLKYERDLILHNALLDMYCKCGSLEDAEALFHRMPQRDVISWSTMISGLAQNGK 359
Query: 115 IDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVAS-----N 165
A ++F++M + N ++ +L + G ++D W F++M + N
Sbjct: 360 SAEALRVFDLMKSEGVAPNRITMVGVLFACSHAGLVEDGWYYFRSMKKLFGIQPEREHHN 419
Query: 166 SMILGLGQNGEVQKA-RVVFDQMREKDDATWSGMI 199
M+ LG+ G++ +A + D E D W ++
Sbjct: 420 CMVDLLGRAGKLDEAVEFIRDMNLEPDAVIWRTLL 454
>gi|449435364|ref|XP_004135465.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g40405-like [Cucumis sativus]
Length = 614
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 195/467 (41%), Positives = 297/467 (63%), Gaps = 1/467 (0%)
Query: 134 TAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDA 193
+ ++ Y + + +F+++ +V +M+ + G++ AR +FD M ++D
Sbjct: 149 SGLIFMYAEMSCLSSCHRVFESVQKPDLVCQTTMVSACAKCGDIGFARNLFDSMPQRDFV 208
Query: 194 TWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQL 253
+W+ MI Y ++G E ++LF LMQ +GV+VN S+ISV++ C L +LD G+ HA +
Sbjct: 209 SWNAMIAGYAQRGQSREALNLFKLMQMDGVKVNEVSMISVVTACTHLGALDQGKWAHAYI 268
Query: 254 VRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSL 313
+ + + V + + L+ MY KCG + + +F K++ W++ I G A G G+K L
Sbjct: 269 EKNKIQMTVNLGTALVDMYFKCGNVDRALKVFWEMNEKNVYTWSTAIGGLAMNGYGQKCL 328
Query: 314 KVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDL 373
++F M G+ P+++T + VL CS G V EGR F+SMK + +EP+ EHY CMVDL
Sbjct: 329 ELFSFMKHEGIAPNEITFISVLKGCSVVGFVDEGRSHFDSMKRDHGIEPRLEHYGCMVDL 388
Query: 374 LGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPY 433
GRAG++E+A+ I MP +P A WG+LL ACR + ++L E A++KL+++E KN G Y
Sbjct: 389 YGRAGRLEEALNFINTMPLKPHAGAWGALLNACRMYKNMELGEFASRKLIEVEGKNHGAY 448
Query: 434 ILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMI 493
+ LSNIYA G + V+ +R++M+ + K PGCS +EV +VH F D SHP + +I
Sbjct: 449 VSLSNIYADTGNWDRVSNVRQSMKAEGISKLPGCSVMEVNGEVHEFFSGD-KSHPSYDVI 507
Query: 494 MRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRV 553
M +I L+ AGY ++ VL D++EEEK +L HSEK+A+A+GL L EG+PIR+
Sbjct: 508 ETMWGEISKRLKLAGYVASTNSVLFDIEEEEKEDALCKHSEKMAIAFGLFSLKEGLPIRI 567
Query: 554 MKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
+KNLR+C DCH K+ISK+ REII+RD NRFHHFKDG CSC+D+W
Sbjct: 568 VKNLRICWDCHDVSKMISKIFEREIIVRDRNRFHHFKDGECSCKDFW 614
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 104/205 (50%), Gaps = 8/205 (3%)
Query: 51 SRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYV 110
S + R+F+ + + D+V QT MV + G + R +FD MP+++ +SW MI+GY
Sbjct: 159 SCLSSCHRVFESVQKPDLVCQTTMVSACAKCGDIGFARNLFDSMPQRDFVSWNAMIAGYA 218
Query: 111 NNNRIDVARKLFEVMP----EKNEVSWTAMLMGYTQCGRI-QDAWE---LFKAMPMKSVV 162
+ A LF++M + NEVS +++ T G + Q W + K +V
Sbjct: 219 QRGQSREALNLFKLMQMDGVKVNEVSMISVVTACTHLGALDQGKWAHAYIEKNKIQMTVN 278
Query: 163 ASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEG 222
+++ + G V +A VF +M EK+ TWS I GY + ++LF+ M+ EG
Sbjct: 279 LGTALVDMYFKCGNVDRALKVFWEMNEKNVYTWSTAIGGLAMNGYGQKCLELFSFMKHEG 338
Query: 223 VRVNFPSLISVLSVCASLASLDHGR 247
+ N + ISVL C+ + +D GR
Sbjct: 339 IAPNEITFISVLKGCSVVGFVDEGR 363
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 118/264 (44%), Gaps = 52/264 (19%)
Query: 183 VFDQMREKDDATWSGMIKVYER-----KGYEL--EVIDLFTLMQKEGVRVNFPSLISVLS 235
+ DQ + + MI+ Y + K ++ +++ +M + NF ++
Sbjct: 65 ILDQCAKPTLFALNSMIRAYSKSLTPHKSFQFYNKILQSNDVMSPDNYTFNF-----LVR 119
Query: 236 VCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMY----------------------- 272
CA ++ + G VH L++ F+ D +V S LI MY
Sbjct: 120 TCAQ-SACEAGPAVHGALIKHGFEYDPHVESGLIFMYAEMSCLSSCHRVFESVQKPDLVC 178
Query: 273 --------IKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGV 324
KCG++ + +FD+ +D V WN++I+GYAQ G ++L +F M GV
Sbjct: 179 QTTMVSACAKCGDIGFARNLFDSMPQRDFVSWNAMIAGYAQRGQSREALNLFKLMQMDGV 238
Query: 325 MPDDVTLVGVLSACSYTGKVKEGR---EIFESMKSKYLVEPKTEHYACMVDLLGRAGQVE 381
++V+++ V++AC++ G + +G+ E K + V T +VD+ + G V+
Sbjct: 239 KVNEVSMISVVTACTHLGALDQGKWAHAYIEKNKIQMTVNLGT----ALVDMYFKCGNVD 294
Query: 382 DAMKLIEAMPFEPDAIIWGSLLGA 405
A+K+ M E + W + +G
Sbjct: 295 RALKVFWEMN-EKNVYTWSTAIGG 317
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 99/231 (42%), Gaps = 17/231 (7%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMP 64
++V T MV + G I A LF MP+++ VSW M+ G+ + + +A LF +M
Sbjct: 175 DLVCQTTMVSACAKCGDIGFARNLFDSMPQRDFVSWNAMIAGYAQRGQSREALNLFKLMQ 234
Query: 65 EKDV----VAQTNMVLGYCQDGRVDEGREIFDEMPKK----NVISWTTMISGYVNNNRID 116
V V+ ++V G +D+G+ + K V T ++ Y +D
Sbjct: 235 MDGVKVNEVSMISVVTACTHLGALDQGKWAHAYIEKNKIQMTVNLGTALVDMYFKCGNVD 294
Query: 117 VARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASN----SMILGLG 172
A K+F M EKN +W+ + G G Q ELF M + + + S++ G
Sbjct: 295 RALKVFWEMNEKNVYTWSTAIGGLAMNGYGQKCLELFSFMKHEGIAPNEITFISVLKGCS 354
Query: 173 QNGEVQKARVVFDQMR-----EKDDATWSGMIKVYERKGYELEVIDLFTLM 218
G V + R FD M+ E + M+ +Y R G E ++ M
Sbjct: 355 VVGFVDEGRSHFDSMKRDHGIEPRLEHYGCMVDLYGRAGRLEEALNFINTM 405
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 112/263 (42%), Gaps = 21/263 (7%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMP----EKNVVSWTVMLGGFIRDSRIDDA 56
MP+R+ VSW AM+ GY + G EA LF M + N VS ++ +D
Sbjct: 202 MPQRDFVSWNAMIAGYAQRGQSREALNLFKLMQMDGVKVNEVSMISVVTACTHLGALDQG 261
Query: 57 RRLFDMMPEKDVVAQTN----MVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+ + + + N +V Y + G VD ++F EM +KNV +W+T I G N
Sbjct: 262 KWAHAYIEKNKIQMTVNLGTALVDMYFKCGNVDRALKVFWEMNEKNVYTWSTAIGGLAMN 321
Query: 113 NRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVAS---- 164
+LF M + NE+++ ++L G + G + + F +M +
Sbjct: 322 GYGQKCLELFSFMKHEGIAPNEITFISVLKGCSVVGFVDEGRSHFDSMKRDHGIEPRLEH 381
Query: 165 -NSMILGLGQNGEVQKARVVFDQMREKDDA-TWSGMIKVYE-RKGYELEVIDLFTLMQKE 221
M+ G+ G +++A + M K A W ++ K EL L++ E
Sbjct: 382 YGCMVDLYGRAGRLEEALNFINTMPLKPHAGAWGALLNACRMYKNMELGEFASRKLIEVE 441
Query: 222 GVRVNFPSLISVLSVCASLASLD 244
G N + +S+ ++ A + D
Sbjct: 442 G--KNHGAYVSLSNIYADTGNWD 462
>gi|449439619|ref|XP_004137583.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Cucumis sativus]
gi|449487109|ref|XP_004157499.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Cucumis sativus]
Length = 642
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 227/602 (37%), Positives = 339/602 (56%), Gaps = 34/602 (5%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMP 64
+V + ++RG + + A LF +M K+V + D F +
Sbjct: 69 DVFMYNTLIRGLSDSDTPSNALQLFVEMRRKSV-------------ALPDSFSFAFLLKA 115
Query: 65 EKDVVAQTN------MVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVA 118
+ A TN + +GY D + G TT+IS Y + A
Sbjct: 116 AANCRALTNGLQLHCLAVGYGLDSHLFVG---------------TTLISMYAECACLVFA 160
Query: 119 RKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQ 178
RK+F+ M E N V+W A++ +C ++DA ++F+ MP++++ + N M+ G + GE+Q
Sbjct: 161 RKVFDEMIEPNIVAWNAIVAACFRCEGVKDAEQVFRCMPIRNLTSWNIMLAGYTKAGELQ 220
Query: 179 KARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCA 238
AR VF +M KDD +WS MI + G + F +++EG+R N SL VLS CA
Sbjct: 221 LAREVFMKMPLKDDVSWSTMIVGFAHNGNFNDAFAFFREVRREGMRPNEVSLTGVLSACA 280
Query: 239 SLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNS 298
+ + GR +H + + F + V + LI Y KCG L +L+FDN + V W +
Sbjct: 281 QAGAFEFGRILHGFVEKSGFLQIISVNNALIDTYSKCGNLDMARLVFDNMLRRSAVSWTA 340
Query: 299 IISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKY 358
+I+G A +G GE+++++F+EM S + PD +T + +L ACS+ G V G F M + Y
Sbjct: 341 MIAGMAMHGYGEEAIRLFNEMEESNIKPDSITFISILYACSHAGLVDLGCSYFSRMVNTY 400
Query: 359 LVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVA 418
+EP EHY CMVDL GRAG+++ A + MP P+ I+W +LLGAC H L LA
Sbjct: 401 GIEPVIEHYGCMVDLYGRAGKLQQAYDFVCQMPISPNDIVWRTLLGACSIHGNLYLAGQV 460
Query: 419 AKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHM 478
++L +L+P+N+G ++LLSNIYA G++ DVA LR++M + + K PG S IEV + ++
Sbjct: 461 KRQLSELDPENSGDHVLLSNIYAVAGKWKDVAALRRSMTHQRLKKTPGWSMIEVNRIIYS 520
Query: 479 FTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAV 538
F + + ++ E + L E GY P+ VLHD++ EEK S+ HSEKLAV
Sbjct: 521 FVAGEKQNDIAVEAHQKLREIMSRLRIEGGYVPEVGSVLHDIEVEEKEDSVSQHSEKLAV 580
Query: 539 AYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRD 598
A+G+ KLP G IRV+KNLR+C DCH+ +KLISKV EI++RD +RFH F G CSCRD
Sbjct: 581 AFGMAKLPRGRAIRVVKNLRICRDCHTVMKLISKVYEVEIVVRDRSRFHSFTHGSCSCRD 640
Query: 599 YW 600
YW
Sbjct: 641 YW 642
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 101/199 (50%), Gaps = 8/199 (4%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
M E N+V+W A+V + +A +F MP +N+ SW +ML G+ + + AR +F
Sbjct: 167 MIEPNIVAWNAIVAACFRCEGVKDAEQVFRCMPIRNLTSWNIMLAGYTKAGELQLAREVF 226
Query: 61 DMMPEKDVVAQTNMVLGYCQDGRVDEG----REIFDEMPKKNVISWTTMISGYVNNNRID 116
MP KD V+ + M++G+ +G ++ RE+ E + N +S T ++S +
Sbjct: 227 MKMPLKDDVSWSTMIVGFAHNGNFNDAFAFFREVRREGMRPNEVSLTGVLSACAQAGAFE 286
Query: 117 VARKLFEVMPEKNEVSW----TAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLG 172
R L + + + A++ Y++CG + A +F M +S V+ +MI G+
Sbjct: 287 FGRILHGFVEKSGFLQIISVNNALIDTYSKCGNLDMARLVFDNMLRRSAVSWTAMIAGMA 346
Query: 173 QNGEVQKARVVFDQMREKD 191
+G ++A +F++M E +
Sbjct: 347 MHGYGEEAIRLFNEMEESN 365
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/331 (20%), Positives = 132/331 (39%), Gaps = 70/331 (21%)
Query: 176 EVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRV-NFPSLISVL 234
+ AR +F +R D ++ +I+ + LF M+++ V + + S +L
Sbjct: 54 SLHYARRLFLDIRNPDVFMYNTLIRGLSDSDTPSNALQLFVEMRRKSVALPDSFSFAFLL 113
Query: 235 SVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIV 294
A+ +L +G Q+H V D ++V + LI+MY +C LV + +FD +IV
Sbjct: 114 KAAANCRALTNGLQLHCLAVGYGLDSHLFVGTTLISMYAECACLVFARKVFDEMIEPNIV 173
Query: 295 MWNSII-------------------------------SGYAQYGLGEKSLKVF------- 316
WN+I+ +GY + G + + +VF
Sbjct: 174 AWNAIVAACFRCEGVKDAEQVFRCMPIRNLTSWNIMLAGYTKAGELQLAREVFMKMPLKD 233
Query: 317 ------------------------HEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFE 352
E+ G+ P++V+L GVLSAC+ G + GR +
Sbjct: 234 DVSWSTMIVGFAHNGNFNDAFAFFREVRREGMRPNEVSLTGVLSACAQAGAFEFGRILHG 293
Query: 353 SMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKL 412
++ ++ + + A ++D + G ++ A + + M A+ W +++ H
Sbjct: 294 FVEKSGFLQIISVNNA-LIDTYSKCGNLDMARLVFDNM-LRRSAVSWTAMIAGMAMH--- 348
Query: 413 DLAEVAAKKLLQLEPKNAGP--YILLSNIYA 441
E A + ++E N P +S +YA
Sbjct: 349 GYGEEAIRLFNEMEESNIKPDSITFISILYA 379
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 71/170 (41%), Gaps = 15/170 (8%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV----VSWTVMLGGFIRDSRIDDA 56
M R+ VSWTAM+ G G EA LF +M E N+ +++ +L +D
Sbjct: 330 MLRRSAVSWTAMIAGMAMHGYGEEAIRLFNEMEESNIKPDSITFISILYACSHAGLVDLG 389
Query: 57 RRLFDMMP-----EKDVVAQTNMVLGYCQDGRVDEGREIFDEMP-KKNVISWTTMISGYV 110
F M E + MV Y + G++ + + +MP N I W T++
Sbjct: 390 CSYFSRMVNTYGIEPVIEHYGCMVDLYGRAGKLQQAYDFVCQMPISPNDIVWRTLLGACS 449
Query: 111 NNNRI----DVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAM 156
+ + V R+L E+ PE N + Y G+ +D L ++M
Sbjct: 450 IHGNLYLAGQVKRQLSELDPE-NSGDHVLLSNIYAVAGKWKDVAALRRSM 498
>gi|395146511|gb|AFN53666.1| hypothetical protein [Linum usitatissimum]
Length = 850
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 220/562 (39%), Positives = 344/562 (61%), Gaps = 16/562 (2%)
Query: 53 IDDARRLFDMMP--EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKK----NVISWTTMI 106
+D A +F+M+ KD+V+ +MV G+ Q G D+ ++F+ M + N ++ +++
Sbjct: 291 LDLAYLVFEMIEGNNKDIVSWNSMVTGFVQGGYPDKALDLFERMRNEGVHPNAVTMVSVM 350
Query: 107 SGYVNNNRIDVARKLFEVMPEKNEVSWT-----AMLMGYTQCGRIQDAWELFKAMPMKSV 161
S + + RK+ + + ++NE+ A + + +CG ++ A LF M + V
Sbjct: 351 SACAKTMNLTLGRKVCDYI-DRNEMMMNLNVCNATIDMFVKCGEVEIARGLFDNMEKRDV 409
Query: 162 VASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQ-- 219
V+ ++I G + E AR +FD M KD W+ +I YE+ G E + +F +Q
Sbjct: 410 VSWTTIIDGYAKMSEHGIARDIFDSMPRKDIPAWNVLISGYEQSGRPKEALAIFRELQLT 469
Query: 220 KEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELV 279
K G R + +L+S LS CA L ++D G +H + + + ++ +A+ LI MY K G++
Sbjct: 470 KSGARPDQVTLLSTLSACAQLGAMDIGEWIHGYIKKERIQLNRNLATSLIDMYSKSGDVE 529
Query: 280 KGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACS 339
K +F + +KD+ +W+++I+G A +G GE ++++F +M + V P+ VT +L ACS
Sbjct: 530 KAIEVFHSIGNKDVFVWSAMIAGLAMHGRGEAAIELFLDMQETQVKPNSVTFTNLLCACS 589
Query: 340 YTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIW 399
++G V EG+ +F+ M+ Y V PKT+HY+CMVD+LGRAG +E+A+K IE MP P A +W
Sbjct: 590 HSGLVDEGKRLFDEMERVYGVVPKTKHYSCMVDVLGRAGHLEEALKFIEGMPLAPSASVW 649
Query: 400 GSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKR 459
G+LLGAC H L+LAE A +LL++EP N G Y+LLSN+YA G + V+ELR+ MR
Sbjct: 650 GALLGACCIHGNLELAEKACSRLLEIEPGNHGAYVLLSNLYAKTGDWEGVSELRQQMRDS 709
Query: 460 NVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHD 519
+ K GCS IE++ VH F D +HP I L++I LR GY ++ +L
Sbjct: 710 GLKKETGCSSIEIDGTVHEFIVGDN-AHPLSRDIYAKLDEIMARLRSHGYVANTLCMLQF 768
Query: 520 VDEEE-KVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREI 578
V+EEE K +L+ HSEK+A+A+GL++ IR++KNLRVC DCH+ K++SKV GR+I
Sbjct: 769 VEEEEMKEKALKLHSEKMAIAFGLIRADSQQAIRIVKNLRVCRDCHTVAKMVSKVYGRDI 828
Query: 579 ILRDANRFHHFKDGLCSCRDYW 600
+LRD RFHHF G CSC+DYW
Sbjct: 829 VLRDRYRFHHFSGGHCSCQDYW 850
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 99/396 (25%), Positives = 182/396 (45%), Gaps = 55/396 (13%)
Query: 84 VDEGREIFDEMPKKNVISWTTMISGYVNNNR-----IDVARKLFEVMPEKNEVSWTAMLM 138
+D R++FD++P+ N+ SW +I ++ + R L + N+ ++ ++
Sbjct: 189 LDYARKVFDQIPQPNLYSWNILIRALATSSDPIQSVLVFIRMLHDSPFGPNKFTFPVLIK 248
Query: 139 GYTQ--CGRIQDAWELFKAMPMKS-----VVASNSMILGLGQNGEVQKARVVFDQM--RE 189
+ C + A M +K+ V NS+I G + A +VF+ +
Sbjct: 249 AVAERRCFLVGKA---VHGMAIKTSFGDDVFVLNSLIHFYASCGHLDLAYLVFEMIEGNN 305
Query: 190 KDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQV 249
KD +W+ M+ + + GY + +DLF M+ EGV N +++SV+S CA +L GR+V
Sbjct: 306 KDIVSWNSMVTGFVQGGYPDKALDLFERMRNEGVHPNAVTMVSVMSACAKTMNLTLGRKV 365
Query: 250 HAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYA----- 304
+ R + +++ V + I M++KCGE+ + +FDN +D+V W +II GYA
Sbjct: 366 CDYIDRNEMMMNLNVCNATIDMFVKCGEVEIARGLFDNMEKRDVVSWTTIIDGYAKMSEH 425
Query: 305 --------------------------QYGLGEKSLKVFHE--MFSSGVMPDDVTLVGVLS 336
Q G +++L +F E + SG PD VTL+ LS
Sbjct: 426 GIARDIFDSMPRKDIPAWNVLISGYEQSGRPKEALAIFRELQLTKSGARPDQVTLLSTLS 485
Query: 337 ACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDA 396
AC+ G + G I +K K ++ ++D+ ++G VE A+++ ++ D
Sbjct: 486 ACAQLGAMDIGEWIHGYIK-KERIQLNRNLATSLIDMYSKSGDVEKAIEVFHSIG-NKDV 543
Query: 397 IIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGP 432
+W +++ H + E A + L ++ P
Sbjct: 544 FVWSAMIAGLAMHGR---GEAAIELFLDMQETQVKP 576
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 137/301 (45%), Gaps = 49/301 (16%)
Query: 4 RNVVSWTAMVRGYVEEGMITEAGTLFWQMPEK----NVVSWTVMLGGFIRDSRIDDARRL 59
+++VSW +MV G+V+ G +A LF +M + N V+ ++ + + R++
Sbjct: 306 KDIVSWNSMVTGFVQGGYPDKALDLFERMRNEGVHPNAVTMVSVMSACAKTMNLTLGRKV 365
Query: 60 FDMMPEKDVVAQTNMVLG----YCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRI 115
D + +++ N+ + + G V+ R +FD M K++V+SWTT+I GY +
Sbjct: 366 CDYIDRNEMMMNLNVCNATIDMFVKCGEVEIARGLFDNMEKRDVVSWTTIIDGYAKMSEH 425
Query: 116 DVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVA------------ 163
+AR +F+ MP K+ +W ++ GY Q GR ++A +F+ + + A
Sbjct: 426 GIARDIFDSMPRKDIPAWNVLISGYEQSGRPKEALAIFRELQLTKSGARPDQVTLLSTLS 485
Query: 164 -----------------------------SNSMILGLGQNGEVQKARVVFDQMREKDDAT 194
+ S+I ++G+V+KA VF + KD
Sbjct: 486 ACAQLGAMDIGEWIHGYIKKERIQLNRNLATSLIDMYSKSGDVEKAIEVFHSIGNKDVFV 545
Query: 195 WSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLV 254
WS MI G I+LF MQ+ V+ N + ++L C+ +D G+++ ++
Sbjct: 546 WSAMIAGLAMHGRGEAAIELFLDMQETQVKPNSVTFTNLLCACSHSGLVDEGKRLFDEME 605
Query: 255 R 255
R
Sbjct: 606 R 606
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 141/303 (46%), Gaps = 27/303 (8%)
Query: 149 AWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYE 208
A ELF A S A + AR VFDQ+ + + +W+ +I+
Sbjct: 174 ASELFTAAAFSSFSA-------------LDYARKVFDQIPQPNLYSWNILIRALATSSDP 220
Query: 209 LEVIDLFTLMQKEGV----RVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYV 264
++ + +F M + + FP LI + A G+ VH ++ F DV+V
Sbjct: 221 IQSVLVFIRMLHDSPFGPNKFTFPVLIKAV---AERRCFLVGKAVHGMAIKTSFGDDVFV 277
Query: 265 ASVLITMYIKCGELVKGKLIFDNFA--SKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSS 322
+ LI Y CG L L+F+ +KDIV WNS+++G+ Q G +K+L +F M +
Sbjct: 278 LNSLIHFYASCGHLDLAYLVFEMIEGNNKDIVSWNSMVTGFVQGGYPDKALDLFERMRNE 337
Query: 323 GVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVED 382
GV P+ VT+V V+SAC+ T + GR++ + + ++ A +D+ + G+VE
Sbjct: 338 GVHPNAVTMVSVMSACAKTMNLTLGRKVCDYIDRNEMMMNLNVCNA-TIDMFVKCGEVEI 396
Query: 383 AMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYAS 442
A L + M + D + W +++ + K+ +A + K+ + +L + Y
Sbjct: 397 ARGLFDNME-KRDVVSWTTIIDG---YAKMSEHGIARDIFDSMPRKDIPAWNVLISGYEQ 452
Query: 443 QGR 445
GR
Sbjct: 453 SGR 455
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 105/237 (44%), Gaps = 19/237 (8%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
M +R+VVSWT ++ GY + A +F MP K++ +W V++ G+ + R +A +F
Sbjct: 404 MEKRDVVSWTTIIDGYAKMSEHGIARDIFDSMPRKDIPAWNVLISGYEQSGRPKEALAIF 463
Query: 61 DMM------PEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKK----NVISWTTMISGYV 110
+ D V + + Q G +D G I + K+ N T++I Y
Sbjct: 464 RELQLTKSGARPDQVTLLSTLSACAQLGAMDIGEWIHGYIKKERIQLNRNLATSLIDMYS 523
Query: 111 NNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSV----VASNS 166
+ ++ A ++F + K+ W+AM+ G GR + A ELF M V V +
Sbjct: 524 KSGDVEKAIEVFHSIGNKDVFVWSAMIAGLAMHGRGEAAIELFLDMQETQVKPNSVTFTN 583
Query: 167 MILGLGQNGEVQKARVVFDQMRE-----KDDATWSGMIKVYERKGYELEVIDLFTLM 218
++ +G V + + +FD+M +S M+ V R G+ E + M
Sbjct: 584 LLCACSHSGLVDEGKRLFDEMERVYGVVPKTKHYSCMVDVLGRAGHLEEALKFIEGM 640
>gi|413918675|gb|AFW58607.1| hypothetical protein ZEAMMB73_481408 [Zea mays]
Length = 694
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 235/623 (37%), Positives = 352/623 (56%), Gaps = 31/623 (4%)
Query: 2 PERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVV------SWTVMLGGFIRDSRIDD 55
P + + ++R ++ G +A LF +M + L R +D
Sbjct: 79 PPLSTPCYNVLMRAFLHAGHPEDALHLFIEMLHAASACPADQHTAACALKSCSRMCALDV 138
Query: 56 ARRLFDMMPEKDVVAQ----TNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVN 111
R + ++ +VA ++++ Y G V R +FD + V+ W +++ Y+
Sbjct: 139 GRGVQAYAVKRGLVADRFVLSSLIHMYASCGDVAAARLVFDAAEESGVVMWNAIVAAYLK 198
Query: 112 NNR----IDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDA----W------ELFKAMP 157
N +++ + + EV +EV+ +++ T CGRI DA W E A
Sbjct: 199 NGDWMEVVEMFKGMLEVGVAFDEVTLVSVV---TACGRIGDAKLGKWVAGHVDEEGLARN 255
Query: 158 MKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTL 217
K V A M + GE+ KAR +FD M+ +D WS MI Y + E + LF+
Sbjct: 256 PKLVTALMDM---YAKCGEIGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALGLFSE 312
Query: 218 MQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGE 277
MQ V N +++SVLS CA L +L+ G+ VH+ + R + + + + L+ Y KCG
Sbjct: 313 MQLARVEPNDVTMVSVLSACAVLGALETGKWVHSYVRRKRLSLTTILGTALVDFYAKCGC 372
Query: 278 LVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSA 337
+ F++ K+ W ++I G A G G ++L++F M +G+ P DVT +GVL A
Sbjct: 373 IDDAVEAFESMPVKNSWTWTALIKGMATNGRGREALELFSSMREAGIEPTDVTFIGVLMA 432
Query: 338 CSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAI 397
CS++ V+EGR F+SM Y ++P+ EHY CMVDLLGRAG V++A + I MP EP+A+
Sbjct: 433 CSHSCLVEEGRRHFDSMARDYGIKPRVEHYGCMVDLLGRAGLVDEAYQFIRTMPIEPNAV 492
Query: 398 IWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMR 457
IW +LL +C H + + E A K+++ L P ++G Y+LLSNIYAS G++ D A +RK M+
Sbjct: 493 IWRALLSSCAVHRNVGIGEEALKQIISLNPSHSGDYVLLSNIYASAGQWKDAAMVRKEMK 552
Query: 458 KRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVL 517
R + K PGCS IE++ V F D HPE I + +E++ G ++ AGY P+++ V
Sbjct: 553 DRGIEKTPGCSLIELDGVVFEFFAEDS-DHPELREIYQKVEEMIGRIKVAGYVPNTADVR 611
Query: 518 HDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGRE 577
+V+E EK S+ +HSEKLA+A+GL+KL G IR+ KNLRVC DCHSA KLISKV RE
Sbjct: 612 LEVEEREKEVSVSHHSEKLAIAFGLMKLDPGATIRLSKNLRVCADCHSATKLISKVYDRE 671
Query: 578 IILRDANRFHHFKDGLCSCRDYW 600
I++RD N FHHFKDG CSC DYW
Sbjct: 672 IVVRDRNIFHHFKDGTCSCNDYW 694
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 77/168 (45%), Gaps = 12/168 (7%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMP----EKNVVSWTVMLGGFIRDSRIDDA 56
M R+VV+W+AM+ GY + EA LF +M E N V+ +L ++
Sbjct: 282 MQSRDVVAWSAMISGYTQADQCREALGLFSEMQLARVEPNDVTMVSVLSACAVLGALETG 341
Query: 57 RRLFDMMPEK----DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+ + + K + T +V Y + G +D+ E F+ MP KN +WT +I G N
Sbjct: 342 KWVHSYVRRKRLSLTTILGTALVDFYAKCGCIDDAVEAFESMPVKNSWTWTALIKGMATN 401
Query: 113 NRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAM 156
R A +LF M E +V++ +LM + +++ F +M
Sbjct: 402 GRGREALELFSSMREAGIEPTDVTFIGVLMACSHSCLVEEGRRHFDSM 449
>gi|356524120|ref|XP_003530680.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g40405-like [Glycine max]
Length = 616
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 207/484 (42%), Positives = 301/484 (62%), Gaps = 5/484 (1%)
Query: 117 VARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGE 176
V + FE+ P T ++ Y + G + +F +V +M+ + G+
Sbjct: 138 VIKHGFELDPHVQ----TGLVFMYAELGCLSSCHNVFDGAVEPDLVTQTAMLNACAKCGD 193
Query: 177 VQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSV 236
+ AR +FD+M E+D TW+ MI Y + G E +D+F LMQ EGV++N S++ VLS
Sbjct: 194 IDFARKMFDEMPERDHVTWNAMIAGYAQCGRSREALDVFHLMQMEGVKLNEVSMVLVLSA 253
Query: 237 CASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMW 296
C L LDHGR VHA + R + + V + + L+ MY KCG + + +F +++ W
Sbjct: 254 CTHLQVLDHGRWVHAYVERYKVRMTVTLGTALVDMYAKCGNVDRAMQVFWGMKERNVYTW 313
Query: 297 NSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKS 356
+S I G A G GE+SL +F++M GV P+ +T + VL CS G V+EGR+ F+SM++
Sbjct: 314 SSAIGGLAMNGFGEESLDLFNDMKREGVQPNGITFISVLKGCSVVGLVEEGRKHFDSMRN 373
Query: 357 KYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAE 416
Y + P+ EHY MVD+ GRAG++++A+ I +MP P W +LL ACR + +L E
Sbjct: 374 VYGIGPQLEHYGLMVDMYGRAGRLKEALNFINSMPMRPHVGAWSALLHACRMYKNKELGE 433
Query: 417 VAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKV 476
+A +K+++LE KN G Y+LLSNIYA + V+ LR+ M+ + V K PGCS IEV+ +V
Sbjct: 434 IAQRKIVELEDKNDGAYVLLSNIYADYKNWESVSSLRQTMKAKGVKKLPGCSVIEVDGEV 493
Query: 477 HMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKL 536
H F D SHP + I LE+I LR +GY +++ VL D++EEEK +L HSEK+
Sbjct: 494 HEFIVGD-KSHPRYDEIEMKLEEISKCLRLSGYVANTNPVLFDIEEEEKEDALSKHSEKV 552
Query: 537 AVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSC 596
A+A+GL+ L VPIRV+ NLR+C DCH+ K+ISK+ REII+RD NRFHHFKDG CSC
Sbjct: 553 AIAFGLISLKGVVPIRVVMNLRICWDCHNVAKMISKIFNREIIVRDRNRFHHFKDGECSC 612
Query: 597 RDYW 600
+DYW
Sbjct: 613 KDYW 616
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 125/264 (47%), Gaps = 43/264 (16%)
Query: 65 EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEV 124
E D QT +V Y + G + +FD + ++++ T M++ ID ARK+F+
Sbjct: 144 ELDPHVQTGLVFMYAELGCLSSCHNVFDGAVEPDLVTQTAMLNACAKCGDIDFARKMFDE 203
Query: 125 MPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASN-SMILGL------------ 171
MPE++ V+W AM+ GY QCGR ++A ++F M M+ V + SM+L L
Sbjct: 204 MPERDHVTWNAMIAGYAQCGRSREALDVFHLMQMEGVKLNEVSMVLVLSACTHLQVLDHG 263
Query: 172 --------------------------GQNGEVQKARVVFDQMREKDDATWSGMIKVYERK 205
+ G V +A VF M+E++ TWS I
Sbjct: 264 RWVHAYVERYKVRMTVTLGTALVDMYAKCGNVDRAMQVFWGMKERNVYTWSSAIGGLAMN 323
Query: 206 GYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVA 265
G+ E +DLF M++EGV+ N + ISVL C+ + ++ GR+ H +R + + +
Sbjct: 324 GFGEESLDLFNDMKREGVQPNGITFISVLKGCSVVGLVEEGRK-HFDSMRNVYGIGPQLE 382
Query: 266 --SVLITMYIKCGELVKGKLIFDN 287
+++ MY + G L K L F N
Sbjct: 383 HYGLMVDMYGRAGRL-KEALNFIN 405
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 106/246 (43%), Gaps = 36/246 (14%)
Query: 194 TWSGMIKVYERKGYELEVIDLFTLM---QKEGVRVNFPSLISVLSVCASLASLDHGRQVH 250
T + MI+ Y + + + + + + + ++ CA L + G VH
Sbjct: 76 TLNSMIRAYSKSSTPSKSFHFYANILHSNNNNLSPDNYTFTFLVRTCAQLQAHVTGLCVH 135
Query: 251 AQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDI----------------- 293
+++ F++D +V + L+ MY + G L +FD D+
Sbjct: 136 GAVIKHGFELDPHVQTGLVFMYAELGCLSSCHNVFDGAVEPDLVTQTAMLNACAKCGDID 195
Query: 294 --------------VMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACS 339
V WN++I+GYAQ G ++L VFH M GV ++V++V VLSAC+
Sbjct: 196 FARKMFDEMPERDHVTWNAMIAGYAQCGRSREALDVFHLMQMEGVKLNEVSMVLVLSACT 255
Query: 340 YTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIW 399
+ + GR + ++ +Y V +VD+ + G V+ AM++ M E + W
Sbjct: 256 HLQVLDHGRWVHAYVE-RYKVRMTVTLGTALVDMYAKCGNVDRAMQVFWGMK-ERNVYTW 313
Query: 400 GSLLGA 405
S +G
Sbjct: 314 SSAIGG 319
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 109/233 (46%), Gaps = 17/233 (7%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDM 62
E ++V+ TAM+ + G I A +F +MPE++ V+W M+ G+ + R +A +F +
Sbjct: 175 EPDLVTQTAMLNACAKCGDIDFARKMFDEMPERDHVTWNAMIAGYAQCGRSREALDVFHL 234
Query: 63 MPEKDV-VAQTNM--VLGYCQDGRV-DEGREIFDEMPKK----NVISWTTMISGYVNNNR 114
M + V + + +M VL C +V D GR + + + V T ++ Y
Sbjct: 235 MQMEGVKLNEVSMVLVLSACTHLQVLDHGRWVHAYVERYKVRMTVTLGTALVDMYAKCGN 294
Query: 115 IDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASN----SMILG 170
+D A ++F M E+N +W++ + G G +++ +LF M + V + S++ G
Sbjct: 295 VDRAMQVFWGMKERNVYTWSSAIGGLAMNGFGEESLDLFNDMKREGVQPNGITFISVLKG 354
Query: 171 LGQNGEVQKARVVFDQMRE-----KDDATWSGMIKVYERKGYELEVIDLFTLM 218
G V++ R FD MR + M+ +Y R G E ++ M
Sbjct: 355 CSVVGLVEEGRKHFDSMRNVYGIGPQLEHYGLMVDMYGRAGRLKEALNFINSM 407
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 120/279 (43%), Gaps = 58/279 (20%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMP----EKNVVSWTVMLGGFIRDSRIDDA 56
MPER+ V+W AM+ GY + G EA +F M + N VS ++L +D
Sbjct: 204 MPERDHVTWNAMIAGYAQCGRSREALDVFHLMQMEGVKLNEVSMVLVLSACTHLQVLDHG 263
Query: 57 RRLFDMMPEK----DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
R + + V T +V Y + G VD ++F M ++NV +W++ I G N
Sbjct: 264 RWVHAYVERYKVRMTVTLGTALVDMYAKCGNVDRAMQVFWGMKERNVYTWSSAIGGLAMN 323
Query: 113 NRIDVARKLFEVMP----EKNEVSWTAMLMG----------------------------- 139
+ + LF M + N +++ ++L G
Sbjct: 324 GFGEESLDLFNDMKREGVQPNGITFISVLKGCSVVGLVEEGRKHFDSMRNVYGIGPQLEH 383
Query: 140 -------YTQCGRIQDAWELFKAMPMKSVVASNSMILG---LGQN---GEVQKARVVFDQ 186
Y + GR+++A +MPM+ V + S +L + +N GE+ + ++V +
Sbjct: 384 YGLMVDMYGRAGRLKEALNFINSMPMRPHVGAWSALLHACRMYKNKELGEIAQRKIV--E 441
Query: 187 MREKDDATWSGMIKVY-ERKGYELEVIDLFTLMQKEGVR 224
+ +K+D + + +Y + K +E V L M+ +GV+
Sbjct: 442 LEDKNDGAYVLLSNIYADYKNWE-SVSSLRQTMKAKGVK 479
>gi|356502293|ref|XP_003519954.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
[Glycine max]
Length = 1047
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 234/637 (36%), Positives = 354/637 (55%), Gaps = 48/637 (7%)
Query: 11 AMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVA 70
A++ YV+ I A F +NVV W VML + ++++ ++F M + +
Sbjct: 412 ALLDLYVKCSDIKTAHEFFLSTETENVVLWNVMLVAYGLLDNLNESFKIFTQMQMEGIEP 471
Query: 71 QTNM---VLGYCQDGR-VDEGREIFDEMPKK----NVISWTTMISGYVNNNRIDVARKLF 122
+L C R VD G +I ++ K NV + +I Y ++D A K+F
Sbjct: 472 NQFTYPSILRTCSSLRAVDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKLGKLDHALKIF 531
Query: 123 EVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMP----------MKSVVASNSMILGLG 172
+ EK+ VSWTAM+ GY Q + +A LFK M S +++ + I L
Sbjct: 532 RRLKEKDVVSWTAMIAGYAQHEKFAEALNLFKEMQDQGIHSDNIGFASAISACAGIQALN 591
Query: 173 QN-----------------------------GEVQKARVVFDQMREKDDATWSGMIKVYE 203
Q G+V+ A FD++ KD+ +W+ +I +
Sbjct: 592 QGQQIHAQACVSGYSDDLSVGNALVSLYARCGKVRDAYFAFDKIFSKDNISWNSLISGFA 651
Query: 204 RKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVY 263
+ G+ E + LF+ M K G +N + +S A++A++ G+Q+HA +++ D +
Sbjct: 652 QSGHCEEALSLFSQMSKAGQEINSFTFGPAVSAAANVANVKLGKQIHAMIIKTGHDSETE 711
Query: 264 VASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSG 323
V++VLIT+Y KCG + + F K+ + WN++++GY+Q+G G K+L +F +M G
Sbjct: 712 VSNVLITLYAKCGNIDDAERQFFEMPEKNEISWNAMLTGYSQHGHGFKALSLFEDMKQLG 771
Query: 324 VMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDA 383
V+P+ VT VGVLSACS+ G V EG + F+SM+ + + PK EHYAC+VDLLGR+G + A
Sbjct: 772 VLPNHVTFVGVLSACSHVGLVDEGIKYFQSMREVHGLVPKPEHYACVVDLLGRSGLLSRA 831
Query: 384 MKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQ 443
+ +E MP +PDA++ +LL AC H +D+ E AA LL+LEPK++ Y+LLSN+YA
Sbjct: 832 RRFVEEMPIQPDAMVCRTLLSACIVHKNIDIGEFAASHLLELEPKDSATYVLLSNMYAVT 891
Query: 444 GRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGL 503
G++ R+ M+ R V K PG SWIEV VH F D HP I L + L
Sbjct: 892 GKWGCRDRTRQMMKDRGVKKEPGRSWIEVNNSVHAFFAGD-QKHPNVDKIYEYLRDLNEL 950
Query: 504 LREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDC 563
E GY P ++ +L+D + +K + HSEKLA+A+GL+ L PI V KNLRVCGDC
Sbjct: 951 AAENGYIPQTNSLLNDAERRQKGPTQIIHSEKLAIAFGLLSLSSSTPIHVFKNLRVCGDC 1010
Query: 564 HSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
H+ IK +SK+ R I++RD+ RFHHFK G+CSC+DYW
Sbjct: 1011 HNWIKYVSKISDRVIVVRDSYRFHHFKGGICSCKDYW 1047
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 112/423 (26%), Positives = 205/423 (48%), Gaps = 22/423 (5%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVS----WTVMLGGFIRDSRIDDA 56
+ +R+ VSW AM+ G + G EA LF QM V ++ +L +
Sbjct: 231 LQKRDSVSWVAMLSGLSQSGCEEEAVLLFCQMHTSGVYPTPYIFSSVLSACTKVEFYKVG 290
Query: 57 RRLFDMMPEKDVVAQT----NMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+L ++ ++ +T +V Y + G ++F+ M +++ +S+ ++ISG
Sbjct: 291 EQLHGLVLKQGFSLETYVCNALVTLYSRLGNFIPAEQVFNAMLQRDEVSYNSLISGLSQQ 350
Query: 113 NRIDVARKLFEVMP----EKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMI 168
D A +LF+ M + + V+ ++L + G + + F + +K+ ++S+ ++
Sbjct: 351 GYSDKALELFKKMCLDCLKPDCVTVASLLSACSSVGALLVGKQ-FHSYAIKAGMSSDIIL 409
Query: 169 LG-----LGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGV 223
G + +++ A F ++ W+ M+ Y E +FT MQ EG+
Sbjct: 410 EGALLDLYVKCSDIKTAHEFFLSTETENVVLWNVMLVAYGLLDNLNESFKIFTQMQMEGI 469
Query: 224 RVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKL 283
N + S+L C+SL ++D G Q+H Q+++ F +VYV+SVLI MY K G+L
Sbjct: 470 EPNQFTYPSILRTCSSLRAVDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKLGKLDHALK 529
Query: 284 IFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGK 343
IF KD+V W ++I+GYAQ+ ++L +F EM G+ D++ +SAC+
Sbjct: 530 IFRRLKEKDVVSWTAMIAGYAQHEKFAEALNLFKEMQDQGIHSDNIGFASAISACAGIQA 589
Query: 344 VKEGREIF-ESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSL 402
+ +G++I ++ S Y + + +V L R G+V DA + + F D I W SL
Sbjct: 590 LNQGQQIHAQACVSGYSDDLSVGN--ALVSLYARCGKVRDAYFAFDKI-FSKDNISWNSL 646
Query: 403 LGA 405
+
Sbjct: 647 ISG 649
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 101/431 (23%), Positives = 197/431 (45%), Gaps = 49/431 (11%)
Query: 78 YCQDGRVDEGREIFDEMPKKNVISWTTM----ISGYVNNNRIDVARKLFEVMPEKNEVSW 133
Y G +D +FDEMP + + W + ++G + + + R++ + + +E ++
Sbjct: 113 YIAFGDLDGAVTVFDEMPVRPLSCWNKVLHRFVAGKMAGRVLGLFRRMLQEKVKPDERTY 172
Query: 134 TAMLMGYTQCGRIQDAWELFKAMPMKSVV--------ASNSMILGLGQNGEVQKARVVFD 185
+L G CG + + + +++ N +I +NG + A+ VFD
Sbjct: 173 AGVLRG---CGGGDVPFHCVEKIHARTITHGYENSLFVCNPLIDLYFKNGFLNSAKKVFD 229
Query: 186 QMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDH 245
++++D +W M+ + G E E + LF M GV SVLS C +
Sbjct: 230 GLQKRDSVSWVAMLSGLSQSGCEEEAVLLFCQMHTSGVYPTPYIFSSVLSACTKVEFYKV 289
Query: 246 GRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQ 305
G Q+H +++ F ++ YV + L+T+Y + G + + +F+ +D V +NS+ISG +Q
Sbjct: 290 GEQLHGLVLKQGFSLETYVCNALVTLYSRLGNFIPAEQVFNAMLQRDEVSYNSLISGLSQ 349
Query: 306 YGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGRE-----IFESMKSKYLV 360
G +K+L++F +M + PD VT+ +LSACS G + G++ I M S ++
Sbjct: 350 QGYSDKALELFKKMCLDCLKPDCVTVASLLSACSSVGALLVGKQFHSYAIKAGMSSDIIL 409
Query: 361 EP------------KTEH-------------YACMVDLLGRAGQVEDAMKLIEAMP---F 392
E KT H + M+ G + ++ K+ M
Sbjct: 410 EGALLDLYVKCSDIKTAHEFFLSTETENVVLWNVMLVAYGLLDNLNESFKIFTQMQMEGI 469
Query: 393 EPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPK-NAGPYILLSNIYASQGRFHDVAE 451
EP+ + S+L C + +DL E ++L+ + N +L ++YA G+ +
Sbjct: 470 EPNQFTYPSILRTCSSLRAVDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKLGKLDHALK 529
Query: 452 LRKNMRKRNVI 462
+ + +++++V+
Sbjct: 530 IFRRLKEKDVV 540
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 97/447 (21%), Positives = 197/447 (44%), Gaps = 54/447 (12%)
Query: 16 YVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNM- 74
Y+ G + A T+F +MP + + W +L F+ LF M ++ V
Sbjct: 113 YIAFGDLDGAVTVFDEMPVRPLSCWNKVLHRFVAGKMAGRVLGLFRRMLQEKVKPDERTY 172
Query: 75 --VLGYCQDGRVD-------EGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVM 125
VL C G V R I + ++ +I Y N ++ A+K+F+ +
Sbjct: 173 AGVLRGCGGGDVPFHCVEKIHARTI-THGYENSLFVCNPLIDLYFKNGFLNSAKKVFDGL 231
Query: 126 PEKNEVSWTAMLMGYTQCGRIQDAWELFKAM------PMKSVVAS--------------- 164
+++ VSW AML G +Q G ++A LF M P + +S
Sbjct: 232 QKRDSVSWVAMLSGLSQSGCEEEAVLLFCQMHTSGVYPTPYIFSSVLSACTKVEFYKVGE 291
Query: 165 ------------------NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKG 206
N+++ + G A VF+ M ++D+ +++ +I ++G
Sbjct: 292 QLHGLVLKQGFSLETYVCNALVTLYSRLGNFIPAEQVFNAMLQRDEVSYNSLISGLSQQG 351
Query: 207 YELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVAS 266
Y + ++LF M + ++ + ++ S+LS C+S+ +L G+Q H+ ++ D+ +
Sbjct: 352 YSDKALELFKKMCLDCLKPDCVTVASLLSACSSVGALLVGKQFHSYAIKAGMSSDIILEG 411
Query: 267 VLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMP 326
L+ +Y+KC ++ F + ++++V+WN ++ Y +S K+F +M G+ P
Sbjct: 412 ALLDLYVKCSDIKTAHEFFLSTETENVVLWNVMLVAYGLLDNLNESFKIFTQMQMEGIEP 471
Query: 327 DDVTLVGVLSACSYTGKVKEGREIF-ESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMK 385
+ T +L CS V G +I + +K+ + + ++D+ + G+++ A+K
Sbjct: 472 NQFTYPSILRTCSSLRAVDLGEQIHTQVLKTGFQFNVYVS--SVLIDMYAKLGKLDHALK 529
Query: 386 LIEAMPFEPDAIIWGSLLGACRTHMKL 412
+ + E D + W +++ H K
Sbjct: 530 IFRRLK-EKDVVSWTAMIAGYAQHEKF 555
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 94/213 (44%), Gaps = 7/213 (3%)
Query: 196 SGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVR 255
+ + Y E I+ LM++ GVR N + + +L C S G ++H ++++
Sbjct: 37 TALSYAYSNDEGEANGINFLHLMEERGVRANSQTYLWLLDGCLSSGWFSDGWKLHGKILK 96
Query: 256 CQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKV 315
F +V + L+ +YI G+L +FD + + WN ++ + + + L +
Sbjct: 97 MGFCAEVVLCERLMDLYIAFGDLDGAVTVFDEMPVRPLSCWNKVLHRFVAGKMAGRVLGL 156
Query: 316 FHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEP-KTEHYAC--MVD 372
F M V PD+ T GVL C G E + ++ + + + C ++D
Sbjct: 157 FRRMLQEKVKPDERTYAGVLRGC---GGGDVPFHCVEKIHARTITHGYENSLFVCNPLID 213
Query: 373 LLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
L + G + A K+ + + + D++ W ++L
Sbjct: 214 LYFKNGFLNSAKKVFDGLQ-KRDSVSWVAMLSG 245
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 74/161 (45%), Gaps = 19/161 (11%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPE----KNVVSWTVMLGGFIRDSRIDDA 56
MPE+N +SW AM+ GY + G +A +LF M + N V++ +L +D+
Sbjct: 736 MPEKNEISWNAMLTGYSQHGHGFKALSLFEDMKQLGVLPNHVTFVGVLSACSHVGLVDEG 795
Query: 57 RRLFDMM-------PEKDVVAQTNMVLGYCQDGRVDEGREIFDEMP-KKNVISWTTMISG 108
+ F M P+ + A +LG + G + R +EMP + + + T++S
Sbjct: 796 IKYFQSMREVHGLVPKPEHYACVVDLLG--RSGLLSRARRFVEEMPIQPDAMVCRTLLSA 853
Query: 109 YVNNNRIDV----ARKLFEVMPEKNEVSWTAMLMGYTQCGR 145
+ + ID+ A L E+ P K+ ++ + Y G+
Sbjct: 854 CIVHKNIDIGEFAASHLLELEP-KDSATYVLLSNMYAVTGK 893
>gi|224124386|ref|XP_002330010.1| predicted protein [Populus trichocarpa]
gi|222871435|gb|EEF08566.1| predicted protein [Populus trichocarpa]
Length = 677
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 228/603 (37%), Positives = 337/603 (55%), Gaps = 16/603 (2%)
Query: 12 MVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQ 71
++R Y G +F ++ +KNVV + VM+ ++ + DA +F M +
Sbjct: 77 LMRAYAACGEPCYTRHIFDEITDKNVVFFNVMIRSYVNNGLYQDALLVFKTMANQGFYPD 136
Query: 72 TNM---VLGYCQ-DGRVDEGREIFDEMPK----KNVISWTTMISGYVNNNRIDVARKLFE 123
VL C G + G +I + K N+ ++S Y +D AR++ +
Sbjct: 137 NYTYPCVLKACSVSGNLWVGLQIHGAVVKLGLDMNLYIGNGLVSMYGKCKWLDAARRVLD 196
Query: 124 VMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAM---PMKSVVASNSMILGLGQNGEVQKA 180
MP ++ VSW +M+ GY Q GR DA +L + M +K + +L N
Sbjct: 197 EMPGRDMVSWNSMVAGYAQNGRFNDALKLCREMEDLKLKPDAGTMGSLLPAVTNTSCDNV 256
Query: 181 RVV---FDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVC 237
V F +++EK +W+ MI VY E +DL+ MQ GV + S+ SVL C
Sbjct: 257 LYVKDMFVKLKEKSLISWNVMIAVYVNNAMPNEAVDLYLQMQVHGVEPDAVSISSVLPAC 316
Query: 238 ASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWN 297
L++ GR++H + R + ++ + + LI MY KCG L + + +FD +D+V W
Sbjct: 317 GDLSAAVLGRRIHEYVERKKLRPNLLLENALIDMYAKCGCLKEARAVFDQMMFRDVVSWT 376
Query: 298 SIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSK 357
S+IS Y G G+ ++ +F +M SG PD + V VL+ACS+ G V EGR F M ++
Sbjct: 377 SMISAYGMSGQGKDAVALFKKMRDSGFTPDWIAFVSVLAACSHAGLVDEGRYCFNLM-AE 435
Query: 358 YLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEV 417
Y + P EHY CMVDLLGRAG++++A L MP EP+ +WGSLL ACR + +++A +
Sbjct: 436 YGITPGIEHYNCMVDLLGRAGKIDEAYHLTRQMPMEPNERVWGSLLSACRVYSSMNIALL 495
Query: 418 AAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVH 477
AA L QL P+ +G Y+LLSNIYA GR+ DV +R M + + K PG S +E+ V+
Sbjct: 496 AADHLFQLAPEQSGYYVLLSNIYAKAGRWQDVETVRSIMNSKGIKKIPGNSNVEINDHVY 555
Query: 478 MFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLA 537
F D SH + I + L + G ++E GY P++ LHDV+EE+K L HSEKLA
Sbjct: 556 TFLAGD-QSHTQSKEIYKALGVLVGRMKELGYMPETDSALHDVEEEDKECHLAVHSEKLA 614
Query: 538 VAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCR 597
+ + ++ G IR+ KN+RVCGDCH A KLISK+ REII+RD +RFHHF+DG+CSC
Sbjct: 615 IVFAILNTKPGSTIRITKNIRVCGDCHVATKLISKIAEREIIIRDTHRFHHFRDGVCSCG 674
Query: 598 DYW 600
DYW
Sbjct: 675 DYW 677
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 130/307 (42%), Gaps = 59/307 (19%)
Query: 1 MPERNVVSWTAMVRGYVEEGMIT----------------EAGT----------------- 27
MP R++VSW +MV GY + G +AGT
Sbjct: 198 MPGRDMVSWNSMVAGYAQNGRFNDALKLCREMEDLKLKPDAGTMGSLLPAVTNTSCDNVL 257
Query: 28 ----LFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMP----EKDVVAQTNMVLGYC 79
+F ++ EK+++SW VM+ ++ ++ ++A L+ M E D V+ ++ VL C
Sbjct: 258 YVKDMFVKLKEKSLISWNVMIAVYVNNAMPNEAVDLYLQMQVHGVEPDAVSISS-VLPAC 316
Query: 80 QD-GRVDEGREIFDEMPKK----NVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWT 134
D GR I + + +K N++ +I Y + AR +F+ M ++ VSWT
Sbjct: 317 GDLSAAVLGRRIHEYVERKKLRPNLLLENALIDMYAKCGCLKEARAVFDQMMFRDVVSWT 376
Query: 135 AMLMGYTQCGRIQDAWELFKAMPMKSV----VASNSMILGLGQNGEVQKARVVFDQMREK 190
+M+ Y G+ +DA LFK M +A S++ G V + R F+ M E
Sbjct: 377 SMISAYGMSGQGKDAVALFKKMRDSGFTPDWIAFVSVLAACSHAGLVDEGRYCFNLMAEY 436
Query: 191 DDAT----WSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCAS----LAS 242
++ M+ + R G E L M E + SL+S V +S L +
Sbjct: 437 GITPGIEHYNCMVDLLGRAGKIDEAYHLTRQMPMEPNERVWGSLLSACRVYSSMNIALLA 496
Query: 243 LDHGRQV 249
DH Q+
Sbjct: 497 ADHLFQL 503
>gi|359473281|ref|XP_003631282.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g40405-like [Vitis vinifera]
Length = 615
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 203/467 (43%), Positives = 292/467 (62%), Gaps = 1/467 (0%)
Query: 134 TAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDA 193
+ ++ Y + G + +F ++ +V +M+ + G+V AR +FD+M KD
Sbjct: 150 SGLIYMYAELGGLDACHRVFSSICEPDLVCQTAMVSACAKMGDVGFARKLFDKMSHKDPI 209
Query: 194 TWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQL 253
W+ MI Y + G E + LF LMQ+EGV+VN S++SVLS C+ L +LD GR HA +
Sbjct: 210 AWNAMISGYVQCGQSREALSLFNLMQREGVKVNEVSMVSVLSACSHLGALDQGRWAHAYI 269
Query: 254 VRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSL 313
R + + + + + LI MY KCG + K +F K++ W+S I G A G GEK L
Sbjct: 270 ERNKLRMTLTLGTALIDMYAKCGNMNKAMEVFWGMKEKNVYTWSSAIGGLAMNGAGEKCL 329
Query: 314 KVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDL 373
++F M V P+++T V VL CS G V+EGR+ FESM Y +EP+ EHY CMVDL
Sbjct: 330 ELFSLMKQDSVQPNEITFVSVLRGCSVVGLVEEGRKHFESMSKVYGIEPRLEHYGCMVDL 389
Query: 374 LGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPY 433
GRAG +++A+ I +MP P WG+LL AC+ + +++ E+A++K+++LE KN G Y
Sbjct: 390 YGRAGHLDEALNFINSMPVRPHVGAWGALLNACKIYRNMEMGELASRKIVELEAKNHGAY 449
Query: 434 ILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMI 493
+LLSNIYA + V+ +R+ M + V K PGCS IEV +VH F D SHP + I
Sbjct: 450 VLLSNIYADSKDWDRVSNVRQTMNVKGVRKQPGCSVIEVGGEVHEFFVGD-KSHPRYAEI 508
Query: 494 MRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRV 553
ML +I L+ +GY +++ V D++EEEK +L HSEK+A+A+GL+ L VPIR+
Sbjct: 509 QVMLGEISRRLKLSGYVANTNPVFFDIEEEEKEDALCMHSEKIAIAFGLISLSPDVPIRI 568
Query: 554 MKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
+KNLRVC DCH A K+ISK REI++RD NRFHHF+DG CSC+ YW
Sbjct: 569 VKNLRVCWDCHDATKMISKAFNREIVVRDRNRFHHFRDGECSCKGYW 615
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 106/205 (51%), Gaps = 10/205 (4%)
Query: 53 IDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+D R+F + E D+V QT MV + G V R++FD+M K+ I+W MISGYV
Sbjct: 162 LDACHRVFSSICEPDLVCQTAMVSACAKMGDVGFARKLFDKMSHKDPIAWNAMISGYVQC 221
Query: 113 NRIDVARKLFEVMPEK----NEVSWTAML-----MGYTQCGRIQDAWELFKAMPMKSVVA 163
+ A LF +M + NEVS ++L +G GR A+ + M ++
Sbjct: 222 GQSREALSLFNLMQREGVKVNEVSMVSVLSACSHLGALDQGRWAHAYIERNKLRM-TLTL 280
Query: 164 SNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGV 223
++I + G + KA VF M+EK+ TWS I G + ++LF+LM+++ V
Sbjct: 281 GTALIDMYAKCGNMNKAMEVFWGMKEKNVYTWSSAIGGLAMNGAGEKCLELFSLMKQDSV 340
Query: 224 RVNFPSLISVLSVCASLASLDHGRQ 248
+ N + +SVL C+ + ++ GR+
Sbjct: 341 QPNEITFVSVLRGCSVVGLVEEGRK 365
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 115/271 (42%), Gaps = 37/271 (13%)
Query: 169 LGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFT-LMQKEGVRV-- 225
+ L + + V D + T++ MI+ + + ++ ++ G
Sbjct: 51 IALNNPNNLHYSNQVLDNSQNPTLFTFNSMIRAHSKSSTPHRSFHFYSRILHSAGYLAPD 110
Query: 226 NFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYI------------ 273
N+ + ++ A L + G VH V+ F+ D +V S LI MY
Sbjct: 111 NY-TFTFLVRTSAQLLAHGTGSSVHGAAVKYGFEYDPHVQSGLIYMYAELGGLDACHRVF 169
Query: 274 -------------------KCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLK 314
K G++ + +FD + KD + WN++ISGY Q G ++L
Sbjct: 170 SSICEPDLVCQTAMVSACAKMGDVGFARKLFDKMSHKDPIAWNAMISGYVQCGQSREALS 229
Query: 315 VFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLL 374
+F+ M GV ++V++V VLSACS+ G + +GR ++ L T A ++D+
Sbjct: 230 LFNLMQREGVKVNEVSMVSVLSACSHLGALDQGRWAHAYIERNKLRMTLTLGTA-LIDMY 288
Query: 375 GRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
+ G + AM++ M E + W S +G
Sbjct: 289 AKCGNMNKAMEVFWGMK-EKNVYTWSSAIGG 318
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 131/285 (45%), Gaps = 22/285 (7%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDM 62
E ++V TAMV + G + A LF +M K+ ++W M+ G+++ + +A LF++
Sbjct: 174 EPDLVCQTAMVSACAKMGDVGFARKLFDKMSHKDPIAWNAMISGYVQCGQSREALSLFNL 233
Query: 63 MPEKDV-VAQTNM--VLGYCQD-GRVDEGR----EIFDEMPKKNVISWTTMISGYVNNNR 114
M + V V + +M VL C G +D+GR I + + T +I Y
Sbjct: 234 MQREGVKVNEVSMVSVLSACSHLGALDQGRWAHAYIERNKLRMTLTLGTALIDMYAKCGN 293
Query: 115 IDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASN----SMILG 170
++ A ++F M EKN +W++ + G G + ELF M SV + S++ G
Sbjct: 294 MNKAMEVFWGMKEKNVYTWSSAIGGLAMNGAGEKCLELFSLMKQDSVQPNEITFVSVLRG 353
Query: 171 LGQNGEVQKARVVFDQMR-----EKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRV 225
G V++ R F+ M E + M+ +Y R G+ E ++ M VR
Sbjct: 354 CSVVGLVEEGRKHFESMSKVYGIEPRLEHYGCMVDLYGRAGHLDEALNFINSMP---VRP 410
Query: 226 NFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLIT 270
+ + ++L+ C +++ G ++V + + + A VL++
Sbjct: 411 HVGAWGALLNACKIYRNMEMGELASRKIV--ELEAKNHGAYVLLS 453
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 81/168 (48%), Gaps = 12/168 (7%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV----VSWTVMLGGFIRDSRIDDA 56
M ++ ++W AM+ GYV+ G EA +LF M + V VS +L +D
Sbjct: 203 MSHKDPIAWNAMISGYVQCGQSREALSLFNLMQREGVKVNEVSMVSVLSACSHLGALDQG 262
Query: 57 RRLFDMMPEK----DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
R + + T ++ Y + G +++ E+F M +KNV +W++ I G N
Sbjct: 263 RWAHAYIERNKLRMTLTLGTALIDMYAKCGNMNKAMEVFWGMKEKNVYTWSSAIGGLAMN 322
Query: 113 NRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAM 156
+ +LF +M + NE+++ ++L G + G +++ + F++M
Sbjct: 323 GAGEKCLELFSLMKQDSVQPNEITFVSVLRGCSVVGLVEEGRKHFESM 370
>gi|326488767|dbj|BAJ97995.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 919
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 231/632 (36%), Positives = 357/632 (56%), Gaps = 48/632 (7%)
Query: 16 YVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNM- 74
YV+ G+I EA +F NVV W +ML + + S + + LF M V
Sbjct: 289 YVKCGVIVEALEIFKSGDRTNVVLWNLMLVAYGQISDLAKSFDLFCQMVAAGVRPNEFTY 348
Query: 75 --VLGYCQ-DGRVDEGREIFDEMPKKNVIS----WTTMISGYVNNNRIDVARKLFEVMPE 127
+L C G ++ G +I K S +I Y +D AR++ EV+
Sbjct: 349 PCLLRTCTYAGEINLGEQIHLLSIKTGFESDMYVSGVLIDMYSKYGWLDKARRILEVLEA 408
Query: 128 KNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSV------VAS----------------- 164
K+ VSWT+M+ GY Q ++A E FK M + + +AS
Sbjct: 409 KDVVSWTSMIAGYVQHEFCKEALETFKDMQLFGIWPDNIGLASAISACAGIKAMRQGQQI 468
Query: 165 ----------------NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYE 208
N+++ + G ++A +F+ + KD TW+GM+ + + G
Sbjct: 469 HSRVYVSGYSADVSIWNALVNLYARCGRSKEAFSLFEAIEHKDKITWNGMVSGFAQSGLY 528
Query: 209 LEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVL 268
E +++F M + GV+ N + +S +S A+LA + G+Q+HA +++ + VA+ L
Sbjct: 529 EEALEVFIKMYQAGVKYNVFTFVSSISASANLADIKQGKQIHATVIKTGCTSETEVANAL 588
Query: 269 ITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDD 328
I++Y KCG + K+ F + ++ V WN+II+ +Q+G G ++L +F +M G+ P+D
Sbjct: 589 ISLYGKCGSIEDAKMQFFEMSERNHVSWNTIITSCSQHGWGLEALDLFDQMKQEGLKPND 648
Query: 329 VTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIE 388
VT +GVL+ACS+ G V+EG F+SM S++ + P+ +HYAC+VD+LGRAGQ++ A K +E
Sbjct: 649 VTFIGVLAACSHVGLVEEGLGYFKSMSSEHGIHPRPDHYACVVDILGRAGQLDRARKFVE 708
Query: 389 AMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHD 448
MP +A++W +LL ACR H +++ E+AAK LL+LEP ++ Y+LLSN YA G++
Sbjct: 709 EMPVSANAMVWRTLLSACRVHKNIEIGELAAKYLLELEPHDSASYVLLSNAYAVTGKWAC 768
Query: 449 VAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAG 508
+RK M+ R V K PG SWIEV+ VH F D + HP I + L + L + G
Sbjct: 769 RDHVRKMMKDRGVRKEPGRSWIEVKNVVHAFFVGDRL-HPLAHQIYKYLADLDDRLAKIG 827
Query: 509 YCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIK 568
Y + F+ H+ ++E+K + HSEKLAVA+GL+ LP +P+RV+KNLRVC DCH+ +K
Sbjct: 828 YIQGNYFLFHEKEKEQKDPTAFVHSEKLAVAFGLMSLPPSMPLRVIKNLRVCNDCHTWMK 887
Query: 569 LISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
S+VMGREI+LRD RFHHF +G CSC D+W
Sbjct: 888 FTSEVMGREIVLRDVYRFHHFNNGNCSCGDFW 919
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 124/502 (24%), Positives = 235/502 (46%), Gaps = 58/502 (11%)
Query: 16 YVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQT--- 72
Y ++G++ A +F Q+ ++ VSW ML G+ R+ ++A L+ M VV
Sbjct: 87 YAKKGLVQRARRVFEQLSARDNVSWVAMLSGYARNGLGEEAVGLYHQMHCSGVVPTPYVL 146
Query: 73 NMVLGYCQDGRV-DEGREIFDEMPKKNVISWT----TMISGYVNNNRIDVARKLFEVMPE 127
+ VL C + ++GR + ++ K+ S T +I+ Y+ + +A ++F MP
Sbjct: 147 SSVLSACTKAALFEQGRLVHAQVYKQGSCSETVVGNALIALYLRFGSLSLAERVFSEMPY 206
Query: 128 KNEVSWTAMLMGYTQCGRIQDAWELFKAM----------PMKSVVAS------------- 164
+ V++ ++ + QCG + A E+F+ M + S++A+
Sbjct: 207 CDRVTFNTLISRHAQCGNGESALEIFEEMRLSGWTPDCVTIASLLAACASIGDLNKGKQL 266
Query: 165 NSMILGLGQN----------------GEVQKARVVFDQMREKDDATWSGMIKVYERKGYE 208
+S +L G + G + +A +F + W+ M+ Y +
Sbjct: 267 HSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEALEIFKSGDRTNVVLWNLMLVAYGQISDL 326
Query: 209 LEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVL 268
+ DLF M GVR N + +L C ++ G Q+H ++ F+ D+YV+ VL
Sbjct: 327 AKSFDLFCQMVAAGVRPNEFTYPCLLRTCTYAGEINLGEQIHLLSIKTGFESDMYVSGVL 386
Query: 269 ITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDD 328
I MY K G L K + I + +KD+V W S+I+GY Q+ +++L+ F +M G+ PD+
Sbjct: 387 IDMYSKYGWLDKARRILEVLEAKDVVSWTSMIAGYVQHEFCKEALETFKDMQLFGIWPDN 446
Query: 329 VTLVGVLSACSYTGKVKEGREIFESMK-SKYLVEPKTEHYACMVDLLGRAGQVEDAMKLI 387
+ L +SAC+ +++G++I + S Y + + +V+L R G+ ++A L
Sbjct: 447 IGLASAISACAGIKAMRQGQQIHSRVYVSGYSADVSI--WNALVNLYARCGRSKEAFSLF 504
Query: 388 EAMPFEPDAIIW-GSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRF 446
EA+ + D I W G + G ++ + + EV K N + +S+I AS
Sbjct: 505 EAIEHK-DKITWNGMVSGFAQSGLYEEALEVFIKMYQAGVKYNV--FTFVSSISASA--- 558
Query: 447 HDVAELRKNMRKRNVIKPPGCS 468
++A++++ + + GC+
Sbjct: 559 -NLADIKQGKQIHATVIKTGCT 579
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 99/391 (25%), Positives = 189/391 (48%), Gaps = 19/391 (4%)
Query: 66 KDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVM 125
+D +A ++ Y + G V R +F+++ ++ +SW M+SGY N + A L+ M
Sbjct: 75 EDRIAGNLLIDLYAKKGLVQRARRVFEQLSARDNVSWVAMLSGYARNGLGEEAVGLYHQM 134
Query: 126 PEKNEVS----WTAMLMGYTQC-----GRIQDAWELFKAMPMKSVVASNSMILGLGQNGE 176
V +++L T+ GR+ A +++K V N++I + G
Sbjct: 135 HCSGVVPTPYVLSSVLSACTKAALFEQGRLVHA-QVYKQGSCSETVVGNALIALYLRFGS 193
Query: 177 VQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSV 236
+ A VF +M D T++ +I + + G +++F M+ G + ++ S+L+
Sbjct: 194 LSLAERVFSEMPYCDRVTFNTLISRHAQCGNGESALEIFEEMRLSGWTPDCVTIASLLAA 253
Query: 237 CASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMW 296
CAS+ L+ G+Q+H+ L++ D + L+ +Y+KCG +V+ IF + ++V+W
Sbjct: 254 CASIGDLNKGKQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEALEIFKSGDRTNVVLW 313
Query: 297 NSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREI-FESMK 355
N ++ Y Q KS +F +M ++GV P++ T +L C+Y G++ G +I S+K
Sbjct: 314 NLMLVAYGQISDLAKSFDLFCQMVAAGVRPNEFTYPCLLRTCTYAGEINLGEQIHLLSIK 373
Query: 356 SKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTH--MKLD 413
+ + E ++D+ + G ++ A +++E + D + W S++ H K
Sbjct: 374 TGF--ESDMYVSGVLIDMYSKYGWLDKARRILEVLE-AKDVVSWTSMIAGYVQHEFCKEA 430
Query: 414 LAEVAAKKLLQLEPKNAGPYILLSNIYASQG 444
L +L + P N G L S I A G
Sbjct: 431 LETFKDMQLFGIWPDNIG---LASAISACAG 458
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 117/252 (46%), Gaps = 42/252 (16%)
Query: 249 VHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGL 308
+HA+ + C D ++LI +Y K G + + + +F+ +++D V W +++SGYA+ GL
Sbjct: 64 IHAKAITCGLGEDRIAGNLLIDLYAKKGLVQRARRVFEQLSARDNVSWVAMLSGYARNGL 123
Query: 309 GEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGR-------------------- 348
GE+++ ++H+M SGV+P L VLSAC+ ++GR
Sbjct: 124 GEEAVGLYHQMHCSGVVPTPYVLSSVLSACTKAALFEQGRLVHAQVYKQGSCSETVVGNA 183
Query: 349 --EIFESMKSKYLVE------PKTEH--YACMVDLLGRAGQVEDAMKLIEAM---PFEPD 395
++ S L E P + + ++ + G E A+++ E M + PD
Sbjct: 184 LIALYLRFGSLSLAERVFSEMPYCDRVTFNTLISRHAQCGNGESALEIFEEMRLSGWTPD 243
Query: 396 AIIWGSLLGACRTHMKLDLAEVAAKKLLQ--LEPKNAGPYIL---LSNIYASQGRFHDVA 450
+ SLL AC + L+ + LL+ + P YI+ L ++Y G +
Sbjct: 244 CVTIASLLAACASIGDLNKGKQLHSYLLKAGMSPD----YIIEGSLLDLYVKCGVIVEAL 299
Query: 451 ELRKNMRKRNVI 462
E+ K+ + NV+
Sbjct: 300 EIFKSGDRTNVV 311
Score = 47.0 bits (110), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 71/161 (44%), Gaps = 19/161 (11%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEK----NVVSWTVMLGGFIRDSRIDDA 56
M ERN VSW ++ + G EA LF QM ++ N V++ +L +++
Sbjct: 608 MSERNHVSWNTIITSCSQHGWGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEG 667
Query: 57 RRLFDMM-------PEKDVVAQTNMVLGYCQDGRVDEGREIFDEMP-KKNVISWTTMISG 108
F M P D A +LG + G++D R+ +EMP N + W T++S
Sbjct: 668 LGYFKSMSSEHGIHPRPDHYACVVDILG--RAGQLDRARKFVEEMPVSANAMVWRTLLSA 725
Query: 109 YVNNNRIDV----ARKLFEVMPEKNEVSWTAMLMGYTQCGR 145
+ I++ A+ L E+ P + S+ + Y G+
Sbjct: 726 CRVHKNIEIGELAAKYLLELEPH-DSASYVLLSNAYAVTGK 765
>gi|297829922|ref|XP_002882843.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328683|gb|EFH59102.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 627
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 212/558 (37%), Positives = 335/558 (60%), Gaps = 42/558 (7%)
Query: 53 IDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEM----PKKNVISWTTMISG 108
++DAR++ D MPEK+VV+ T M+ Y Q G E +F EM K N ++ T+++
Sbjct: 102 LEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALSVFAEMMRSDGKPNEFTFATVLTS 161
Query: 109 YVNNNRIDVARKLFEVMPEKNEVSW----TAMLMGYTQCGRIQDAWELFKAMPMKSVVAS 164
+ + + + +++ ++ + N S +++L Y + G+I++A E+F+ +P + VV+
Sbjct: 162 CIRASGLALGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIEEAREIFECLPERDVVSC 221
Query: 165 NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVR 224
++I G Y + G + E +++F +Q EG+R
Sbjct: 222 TAIIAG-------------------------------YAQLGLDEEALEMFQRLQSEGMR 250
Query: 225 VNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLI 284
N+ + S+L+ + LA LDHG+Q H ++R + + + LI MY KCG L + +
Sbjct: 251 PNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYAQRL 310
Query: 285 FDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSG-VMPDDVTLVGVLSACSYTGK 343
FDN + + WN+++ GY+++GLG + L++F M V PD VTL+ VLS CS+
Sbjct: 311 FDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGKM 370
Query: 344 VKEGREIFESM-KSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSL 402
G I++ M +Y ++P TEHY C+VD+LGRAG++++A + I+ MP +P A + GSL
Sbjct: 371 EDTGLSIYDGMVAGEYGIKPDTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSL 430
Query: 403 LGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVI 462
LGACR H+ +D+ E +L+++EP+NAG Y++LSN+YAS GR+ DV +R M ++ V
Sbjct: 431 LGACRVHLSVDIGEYVGHRLIEIEPENAGNYVILSNLYASAGRWEDVNNVRAMMMQKAVT 490
Query: 463 KPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDE 522
K PG SWI+ E+ +H F D +HP ++ +++I +++AGY PD S VL+DVDE
Sbjct: 491 KEPGRSWIQHEQTLHYFHAND-RTHPRREEVLAKMKEISIKMKQAGYVPDISCVLYDVDE 549
Query: 523 EEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRD 582
E+K L HSEKLA+ +GL+ EG+PIRV KNLR+C DCH+ K+ SKV RE+ LRD
Sbjct: 550 EQKEKMLLGHSEKLALTFGLITTGEGIPIRVFKNLRICVDCHNFAKIFSKVFEREVSLRD 609
Query: 583 ANRFHHFKDGLCSCRDYW 600
NRFH G+CSC DYW
Sbjct: 610 KNRFHQIVKGICSCGDYW 627
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 150/278 (53%), Gaps = 19/278 (6%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM----PEKNVVSWTVMLGGFIRDSRIDDA 56
MPE+NVVSWTAM+ Y + G +EA ++F +M + N ++ +L IR S +
Sbjct: 112 MPEKNVVSWTAMISRYSQTGHSSEALSVFAEMMRSDGKPNEFTFATVLTSCIRASGLALG 171
Query: 57 RRLFDMMP----EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+++ ++ + + ++++ Y + G+++E REIF+ +P+++V+S T +I+GY
Sbjct: 172 KQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIEEAREIFECLPERDVVSCTAIIAGYAQL 231
Query: 113 NRIDVARKLFEVMPEK----NEVSWTAMLMGYTQC-----GRIQDAWELFKAMPMKSVVA 163
+ A ++F+ + + N V++ ++L + G+ L + +P +V+
Sbjct: 232 GLDEEALEMFQRLQSEGMRPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVL- 290
Query: 164 SNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEG- 222
NS+I + G + A+ +FD M E+ +W+ M+ Y + G EV++LF LM+ E
Sbjct: 291 QNSLIDMYSKCGNLSYAQRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKR 350
Query: 223 VRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDV 260
V+ + +L++VLS C+ D G ++ +V ++ +
Sbjct: 351 VKPDAVTLLAVLSGCSHGKMEDTGLSIYDGMVAGEYGI 388
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 108/211 (51%), Gaps = 5/211 (2%)
Query: 222 GVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKG 281
G + F ++L+ C +L G++VHA +++ ++ Y+ + L+ Y KC L
Sbjct: 46 GPEIGFHCYDALLNACLDKRALREGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDA 105
Query: 282 KLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYT 341
+ + D K++V W ++IS Y+Q G ++L VF EM S P++ T VL++C
Sbjct: 106 RKVLDEMPEKNVVSWTAMISRYSQTGHSSEALSVFAEMMRSDGKPNEFTFATVLTSCIRA 165
Query: 342 GKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGS 401
+ G++I + K+ + + ++D+ +AGQ+E+A ++ E +P E D + +
Sbjct: 166 SGLALGKQI-HGLIVKWNYDSHIFVGSSLLDMYAKAGQIEEAREIFECLP-ERDVVSCTA 223
Query: 402 LLGACRTHMKLDLAEVAAKKLLQLEPKNAGP 432
++ + +L L E A + +L+ + P
Sbjct: 224 IIAG---YAQLGLDEEALEMFQRLQSEGMRP 251
>gi|297833632|ref|XP_002884698.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330538|gb|EFH60957.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 685
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 230/620 (37%), Positives = 338/620 (54%), Gaps = 48/620 (7%)
Query: 28 LFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQT---NMVLGYCQDGR- 83
LF N+ + ++ GF+ + + LF + + + +VL C
Sbjct: 67 LFSHTQFPNIFLYNTLINGFVNNHLFHETLDLFLSIRKHGLNLHGFTFPLVLKACTRASN 126
Query: 84 ----VDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMG 139
+D + +V + T+++S Y + R++ A K+FE +PE++ V+WTA+ G
Sbjct: 127 RKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKVFEEIPERSVVTWTALFSG 186
Query: 140 YTQCGRIQDAWELFKAMP---------------------------------------MKS 160
YT G+ ++A +LFK M K+
Sbjct: 187 YTTAGKHREAIDLFKKMVEMGVRPDSYFIVQVLSACVHVGDLDSGEWIVKHMEEMEMQKN 246
Query: 161 VVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQK 220
+++ + G+++KAR VFD M EKD TWS MI+ Y + E I+ F M +
Sbjct: 247 SFVRTTLVNLYAKCGKMEKARSVFDSMGEKDIVTWSTMIQGYASNSFPKEGIEFFLQMLQ 306
Query: 221 EGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVK 280
E ++ + S++ LS CASL +LD G + + R +F ++++A+ LI MY KCG + +
Sbjct: 307 ENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMAR 366
Query: 281 GKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSY 340
G +F KDIV+ N+ ISG A+ G + S VF + G+ PD T +G+L C +
Sbjct: 367 GFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVH 426
Query: 341 TGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWG 400
G +++G F ++ Y ++ EHY CMVDL GRAG ++DA +LI MP P+AI+WG
Sbjct: 427 AGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWG 486
Query: 401 SLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRN 460
+LL CR LAE K+L+ LEP NAG Y+ LSNIY+ GR+ + AE+R M ++
Sbjct: 487 ALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVSGRWDEAAEVRDMMNRKG 546
Query: 461 VIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDV 520
+ K PG SWIE+E VH F D SHP I LE +G +R G+ P + FV DV
Sbjct: 547 MKKIPGYSWIELEGTVHEFLADD-KSHPLSDKIYAKLEDLGNEMRLMGFVPTTEFVFFDV 605
Query: 521 DEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIIL 580
++EEK L +HSEKLAVA+GL+ G IRV+KNLRVCGDCH +KLISK+ REI++
Sbjct: 606 EDEEKERVLGHHSEKLAVAFGLISTDHGQVIRVVKNLRVCGDCHEVMKLISKITRREIVV 665
Query: 581 RDANRFHHFKDGLCSCRDYW 600
RD NRFH F +G CSC DYW
Sbjct: 666 RDNNRFHCFTNGSCSCNDYW 685
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 116/252 (46%), Gaps = 55/252 (21%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEK----------NVVSWTVMLGGFIRD 50
+PER+VV+WTA+ GY G EA LF +M E V+S V +G D
Sbjct: 172 IPERSVVTWTALFSGYTTAGKHREAIDLFKKMVEMGVRPDSYFIVQVLSACVHVGDL--D 229
Query: 51 SRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYV 110
S + + +M +K+ +T +V Y + G++++ R +FD M +K++++W+TMI GY
Sbjct: 230 SGEWIVKHMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMGEKDIVTWSTMIQGYA 289
Query: 111 NNNRIDVARKLFEVMPEKNE--------------VSWTAMLMG----------------- 139
+N+ + F M ++N S A+ +G
Sbjct: 290 SNSFPKEGIEFFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLF 349
Query: 140 --------YTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMRE-- 189
Y +CG + +E+FK M K +V N+ I GL +NG V+ + VF Q +
Sbjct: 350 MANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLG 409
Query: 190 --KDDATWSGMI 199
D +T+ G++
Sbjct: 410 ISPDGSTFLGLL 421
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 93/207 (44%), Gaps = 8/207 (3%)
Query: 229 SLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNF 288
+LISV S + +H +QVH L+ D ++ ++L+ + + L+F +
Sbjct: 18 TLISVAS------TFNHLKQVHVSLIHHHLHHDTFLVNLLLKRTLFFRQTHYSFLLFSHT 71
Query: 289 ASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGR 348
+I ++N++I+G+ L ++L +F + G+ T VL AC+ K G
Sbjct: 72 QFPNIFLYNTLINGFVNNHLFHETLDLFLSIRKHGLNLHGFTFPLVLKACTRASNRKLGI 131
Query: 349 EIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRT 408
++ S+ K ++ + +G++ DA K+ E +P E + W +L T
Sbjct: 132 DL-HSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKVFEEIP-ERSVVTWTALFSGYTT 189
Query: 409 HMKLDLAEVAAKKLLQLEPKNAGPYIL 435
K A KK++++ + +I+
Sbjct: 190 AGKHREAIDLFKKMVEMGVRPDSYFIV 216
>gi|359486639|ref|XP_002284011.2| PREDICTED: pentatricopeptide repeat-containing protein At2g39620-like
[Vitis vinifera]
Length = 1005
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 233/650 (35%), Positives = 353/650 (54%), Gaps = 57/650 (8%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDM 62
+ +++ T ++ Y + G +A LFW + +++V+W+ ++ ++ ++A LF
Sbjct: 361 DSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQE 420
Query: 63 MPEKDVVAQ--TNM-VLGYCQD-GRVDEGREIFDEMPKKNVIS----WTTMISGYVNNNR 114
M + + T M +L C D + G+ I K ++ S T ++S Y
Sbjct: 421 MQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGF 480
Query: 115 IDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELF----------KAMPMKSVVAS 164
A F M ++ V+W +++ GY Q G +A ++F A M VV +
Sbjct: 481 FTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPA 540
Query: 165 NSMILGLGQN-----------------------------GEVQKARVVFDQMR-EKDDAT 194
+++ L Q G + A +F++ KD+ T
Sbjct: 541 CALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVT 600
Query: 195 WSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLV 254
W+ +I Y + G+ E I F M+ E N + +SVL A LA+ G HA ++
Sbjct: 601 WNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACII 660
Query: 255 RCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLK 314
+ F + V + LI MY KCG+L + +F+ KD V WN+++SGYA +G G++++
Sbjct: 661 QMGFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIA 720
Query: 315 VFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLL 374
+F M S V D V+ V VLSAC + G V+EGR+IF SM KY ++P EHYACMVDLL
Sbjct: 721 LFSLMQESQVQIDSVSFVSVLSACRHAGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLL 780
Query: 375 GRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYI 434
GRAG ++ + I+ MP EPDA +WG+LLG+CR H + L EVA L++LEP+N ++
Sbjct: 781 GRAGLFDETLGFIKVMPVEPDAGVWGALLGSCRMHSNVKLGEVALDHLVKLEPRNPAHFV 840
Query: 435 LLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPE----H 490
+LS+IYA GR+ D + R M + K PGCSW+E++ KVH F D SHP+ H
Sbjct: 841 VLSSIYAQSGRWADAGKARSKMNDLGLKKTPGCSWVELKNKVHAFRVGD-KSHPQLESMH 899
Query: 491 PMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVP 550
+ +LEK + + GY PD S VL +V+EE+K L HSE+LA+ + L+ P G
Sbjct: 900 LLWNTLLEK----MEKIGYVPDRSCVLQNVEEEDKEMFLYSHSERLAITFALLNTPPGST 955
Query: 551 IRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
I+++KNLRVC DCH+ K ISK+ R II+RDA RFHHF+DG+CSC DYW
Sbjct: 956 IQIVKNLRVCADCHTTTKFISKITTRRIIVRDATRFHHFEDGICSCNDYW 1005
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 126/475 (26%), Positives = 219/475 (46%), Gaps = 49/475 (10%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDM 62
ER+V +V Y + G + A +F +MP+++VV+W M+ G + +A F
Sbjct: 161 ERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRS 220
Query: 63 MP----EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTT--MISGYVNNNRID 116
M E V+ N+ G C+ ++ R I + +++ S + +I Y +D
Sbjct: 221 MQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFSSAVSNGLIDLYSKCGDVD 280
Query: 117 VARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSV----VASNSMILGLG 172
VAR++F+ M ++++VSW M+ GY G + ELF M + +V V++ S L
Sbjct: 281 VARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAA 340
Query: 173 QN-----------------------------------GEVQKARVVFDQMREKDDATWSG 197
+ GE +KA+ +F ++ +D WS
Sbjct: 341 ETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSA 400
Query: 198 MIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQ 257
+I + GY E + LF MQ + ++ N +L+S+L CA L+ L G+ +H V+
Sbjct: 401 IIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKAD 460
Query: 258 FDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFH 317
D D+ + L++MY KCG F+ +S+DIV WNS+I+GYAQ G ++ +F+
Sbjct: 461 MDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFY 520
Query: 318 EMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRA 377
++ S + PD T+VGV+ AC+ + +G I + K E ++D+ +
Sbjct: 521 KLRLSAINPDAGTMVGVVPACALLNDLDQGTCI-HGLIVKLGFESDCHVKNALIDMYAKC 579
Query: 378 GQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGP 432
G + A L F D + W ++ A +M+ A+ A Q+ +N P
Sbjct: 580 GSLPSAEFLFNKTDFTKDEVTWNVIIAA---YMQNGHAKEAISSFHQMRLENFHP 631
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 116/418 (27%), Positives = 199/418 (47%), Gaps = 16/418 (3%)
Query: 2 PERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV----VSWTVMLGGFIRDSRIDDAR 57
P + + W +M+R Y EA +++ M EK + ++T +L + +
Sbjct: 90 PNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGV 149
Query: 58 RLFDMMP----EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNN 113
+ E+DV +V Y + G + RE+FD+MPK++V++W MI+G +
Sbjct: 150 WFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSE 209
Query: 114 ----RIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMK--SVVASNSM 167
+D R + V E + VS + G + I+ + + + S SN +
Sbjct: 210 DPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFSSAVSNGL 269
Query: 168 ILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNF 227
I + G+V AR VFDQM ++DD +W M+ Y G +EV++LF M+ VR+N
Sbjct: 270 IDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINK 329
Query: 228 PSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDN 287
S +S A L+ G+++H ++ + D D+ VA+ L+ MY KCGE K K +F
Sbjct: 330 VSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWG 389
Query: 288 FASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEG 347
+D+V W++II+ Q G E++L +F EM + + P+ VTL+ +L AC+ +K G
Sbjct: 390 LQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLG 449
Query: 348 REIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
+ I K ++ +V + + G A+ M D + W SL+
Sbjct: 450 KSI-HCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMS-SRDIVTWNSLING 505
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/347 (24%), Positives = 167/347 (48%), Gaps = 22/347 (6%)
Query: 72 TNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEK--- 128
T+++ Y + D R +FD P + I W +MI Y + + + A +++ M EK
Sbjct: 67 THLINLYSLFHKCDLARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLE 126
Query: 129 -NEVSWTAMLMGYTQCGRIQDA-W---ELFKAMPMKSVVASNSMILGLGQNGEVQKARVV 183
++ ++T +L T +Q+ W E+ + + V ++ + G++++AR V
Sbjct: 127 PDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREV 186
Query: 184 FDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASL 243
FD+M ++D W+ MI + E +D F MQ GV + SL+++ L+++
Sbjct: 187 FDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNI 246
Query: 244 DHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGY 303
+ R +H + R D V++ LI +Y KCG++ + +FD +D V W ++++GY
Sbjct: 247 ELCRSIHGYVFR--RDFSSAVSNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGY 304
Query: 304 AQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIF-----ESMKSKY 358
A G + L++F +M V + V+ V A + T +++G+EI + + S
Sbjct: 305 AHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDI 364
Query: 359 LVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
LV ++ + + G+ E A +L + D + W +++ A
Sbjct: 365 LVATP------LMVMYAKCGETEKAKQLFWGLQGR-DLVAWSAIIAA 404
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 92/192 (47%), Gaps = 21/192 (10%)
Query: 227 FPSLIS-----------VLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASV--LITMYI 273
FPSL S +LS C L L Q+HAQ++ F + + L +++
Sbjct: 21 FPSLSSSTYTNYLHYPRLLSSCKHLNPL---LQIHAQIIVSGFKHHHSITHLINLYSLFH 77
Query: 274 KCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVG 333
KC +L + +FD+ + ++WNS+I Y + ++L++++ M G+ PD T
Sbjct: 78 KC-DLARS--VFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTF 134
Query: 334 VLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFE 393
VL AC+ ++EG + + L E A +VD+ + G ++ A ++ + MP +
Sbjct: 135 VLKACTGALNLQEGVWFHGEIDRRGL-ERDVFIGAGLVDMYSKMGDLKRAREVFDKMP-K 192
Query: 394 PDAIIWGSLLGA 405
D + W +++
Sbjct: 193 RDVVAWNAMIAG 204
>gi|356555170|ref|XP_003545909.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Glycine max]
Length = 741
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 232/654 (35%), Positives = 355/654 (54%), Gaps = 58/654 (8%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEK-----NVVSWTVM--LGGFIRDSRI 53
+P+ + + + ++ + G+ EA L+ + + N V TV G SR+
Sbjct: 92 IPQPDPTTCSTLISAFTTRGLPNEAIRLYASLRARGIKPHNSVFLTVAKACGASGDASRV 151
Query: 54 ----DDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGY 109
DDA R M D ++ Y + V+ R +FD++ K+V+SWT+M S Y
Sbjct: 152 KEVHDDAIRCGMM---SDAFLGNALIHAYGKCKCVEGARRVFDDLVVKDVVSWTSMSSCY 208
Query: 110 VNNNRIDVARKLF----------------EVMPEKNEVS--------------------- 132
VN + +F ++P +E+
Sbjct: 209 VNCGLPRLGLAVFCEMGWNGVKPNSVTLSSILPACSELKDLKSGRAIHGFAVRHGMIENV 268
Query: 133 --WTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREK 190
+A++ Y +C ++ A +F MP + VV+ N ++ N E K +F QM K
Sbjct: 269 FVCSALVSLYARCLSVKQARLVFDLMPHRDVVSWNGVLTAYFTNREYDKGLALFSQMSSK 328
Query: 191 ----DDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHG 246
D+ATW+ +I G + +++ MQ G + N ++ S L C+ L SL G
Sbjct: 329 GVEADEATWNAVIGGCMENGQTEKAVEMLRKMQNLGFKPNQITISSFLPACSILESLRMG 388
Query: 247 RQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQY 306
++VH + R D+ + L+ MY KCG+L + +FD KD+V WN++I A +
Sbjct: 389 KEVHCYVFRHWLIGDLTTMTALVYMYAKCGDLNLSRNVFDMICRKDVVAWNTMIIANAMH 448
Query: 307 GLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEH 366
G G + L +F M SG+ P+ VT GVLS CS++ V+EG +IF SM +LVEP H
Sbjct: 449 GNGREVLLLFESMLQSGIKPNSVTFTGVLSGCSHSRLVEEGLQIFNSMGRDHLVEPDANH 508
Query: 367 YACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLE 426
YACMVD+ RAG++ +A + I+ MP EP A WG+LLGACR + ++LA+++A KL ++E
Sbjct: 509 YACMVDVFSRAGRLHEAYEFIQRMPMEPTASAWGALLGACRVYKNVELAKISANKLFEIE 568
Query: 427 PKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVS 486
P N G Y+ L NI + + + +E R M++R + K PGCSW++V +VH F D +
Sbjct: 569 PNNPGNYVSLFNILVTAKLWSEASEARILMKERGITKTPGCSWLQVGDRVHTFVVGD-KN 627
Query: 487 HPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLP 546
+ E I L+++G ++ AGY PD+ +VL D+D+EEK SL HSEKLAVA+G++ L
Sbjct: 628 NMESDKIYNFLDELGEKMKSAGYKPDTDYVLQDIDQEEKAESLCSHSEKLAVAFGILNLN 687
Query: 547 EGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
IRV KNLR+CGDCH+AIK +SKV+G II+RD+ RFHHF++G CSC+D W
Sbjct: 688 GQSSIRVFKNLRICGDCHNAIKYVSKVVGVTIIVRDSLRFHHFRNGNCSCQDLW 741
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 134/283 (47%), Gaps = 8/283 (2%)
Query: 82 GRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYT 141
G +++FD +P+ + + +T+IS + + A +L+ + + ++ +
Sbjct: 80 GDFRRAQQLFDNIPQPDPTTCSTLISAFTTRGLPNEAIRLYASLRARGIKPHNSVFLTVA 139
Query: 142 Q-CGRIQDAWEL-------FKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDA 193
+ CG DA + + M N++I G+ V+ AR VFD + KD
Sbjct: 140 KACGASGDASRVKEVHDDAIRCGMMSDAFLGNALIHAYGKCKCVEGARRVFDDLVVKDVV 199
Query: 194 TWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQL 253
+W+ M Y G + +F M GV+ N +L S+L C+ L L GR +H
Sbjct: 200 SWTSMSSCYVNCGLPRLGLAVFCEMGWNGVKPNSVTLSSILPACSELKDLKSGRAIHGFA 259
Query: 254 VRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSL 313
VR +V+V S L+++Y +C + + +L+FD +D+V WN +++ Y +K L
Sbjct: 260 VRHGMIENVFVCSALVSLYARCLSVKQARLVFDLMPHRDVVSWNGVLTAYFTNREYDKGL 319
Query: 314 KVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKS 356
+F +M S GV D+ T V+ C G+ ++ E+ M++
Sbjct: 320 ALFSQMSSKGVEADEATWNAVIGGCMENGQTEKAVEMLRKMQN 362
>gi|449437256|ref|XP_004136408.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 632
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 199/453 (43%), Positives = 291/453 (64%), Gaps = 2/453 (0%)
Query: 149 AWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYE 208
A +LF M ++ VV+ N++I G +G V KAR+VFD M EK+ +WS MI Y R
Sbjct: 181 AQKLFDEMVVRDVVSWNTLISGYCFSGMVDKARMVFDGMMEKNLVSWSTMISGYARNEKY 240
Query: 209 LEVIDLFTLMQKEG-VRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASV 267
+ I+LF MQ EG + N +L+SVLS CA L +LD G+ +H + R + +V +++ +
Sbjct: 241 ADAIELFRQMQHEGGLAPNDVTLVSVLSACAHLGALDLGKWIHRFIRRNKIEVGLFLGNA 300
Query: 268 LITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPD 327
L MY KCG +++ K +F +D++ W+ II G A YG ++ F EM G+ P+
Sbjct: 301 LADMYAKCGCVLEAKGVFHEMHERDVISWSIIIMGLAMYGYANEAFNFFAEMIEDGLEPN 360
Query: 328 DVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLI 387
D++ +G+L+AC++ G V +G E F+ M Y + PK EHY C+VDLL RAG+++ A LI
Sbjct: 361 DISFMGLLTACTHAGLVDKGLEYFDMMPQVYGITPKIEHYGCVVDLLSRAGRLDQAESLI 420
Query: 388 EAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFH 447
+MP +P+ I+WG+LLG CR + + E ++L+L+ ++G + L+N+YAS GR
Sbjct: 421 NSMPMQPNVIVWGALLGGCRIYKDAERGERVVWRILELDSNHSGSLVYLANVYASMGRLD 480
Query: 448 DVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREA 507
D A R MR +K PGCSWIE+ V+ F D SHP+ I M+ ++ ++ A
Sbjct: 481 DAASCRLRMRDNKSMKTPGCSWIEINNSVYEFFMGDS-SHPQSLRIYSMIRELKWKMKVA 539
Query: 508 GYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAI 567
GY P + V+H++DEEEK +L HSEKLA+A+GL+ EG IR++KNLRVC DCH AI
Sbjct: 540 GYKPKTDLVIHNIDEEEKEDALSTHSEKLALAFGLINTSEGTTIRIVKNLRVCNDCHDAI 599
Query: 568 KLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
K+ISK++ REI++RD +RFHHFKDG CSC DYW
Sbjct: 600 KIISKIVEREIVVRDRSRFHHFKDGKCSCNDYW 632
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 142/291 (48%), Gaps = 24/291 (8%)
Query: 47 FIRDSRID---------DARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKK 97
F+R+S +D A++LFD M +DVV+ ++ GYC G VD+ R +FD M +K
Sbjct: 163 FVRNSLVDLYFKVGCNCIAQKLFDEMVVRDVVSWNTLISGYCFSGMVDKARMVFDGMMEK 222
Query: 98 NVISWTTMISGYVNNNRIDVARKLFEVMPEK-----NEVSWTAMLMGYTQCGRIQDAWEL 152
N++SW+TMISGY N + A +LF M + N+V+ ++L G + +
Sbjct: 223 NLVSWSTMISGYARNEKYADAIELFRQMQHEGGLAPNDVTLVSVLSACAHLGALDLGKWI 282
Query: 153 FKAMPMKSV----VASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYE 208
+ + + N++ + G V +A+ VF +M E+D +WS +I GY
Sbjct: 283 HRFIRRNKIEVGLFLGNALADMYAKCGCVLEAKGVFHEMHERDVISWSIIIMGLAMYGYA 342
Query: 209 LEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQ---VHAQLVRCQFDVDVYVA 265
E + F M ++G+ N S + +L+ C +D G + + Q+ ++ Y
Sbjct: 343 NEAFNFFAEMIEDGLEPNDISFMGLLTACTHAGLVDKGLEYFDMMPQVYGITPKIEHY-- 400
Query: 266 SVLITMYIKCGELVKGKLIFDNFASK-DIVMWNSIISGYAQYGLGEKSLKV 315
++ + + G L + + + ++ + ++++W +++ G Y E+ +V
Sbjct: 401 GCVVDLLSRAGRLDQAESLINSMPMQPNVIVWGALLGGCRIYKDAERGERV 451
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 85/201 (42%), Gaps = 44/201 (21%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
M R+VVSW ++ GY GM+ +A +F M EKN+VSW+ M+ G+ R+ + DA LF
Sbjct: 188 MVVRDVVSWNTLISGYCFSGMVDKARMVFDGMMEKNLVSWSTMISGYARNEKYADAIELF 247
Query: 61 DMMPEKDVVAQTNMVL----------------------------------------GYCQ 80
M + +A ++ L Y +
Sbjct: 248 RQMQHEGGLAPNDVTLVSVLSACAHLGALDLGKWIHRFIRRNKIEVGLFLGNALADMYAK 307
Query: 81 DGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEK----NEVSWTAM 136
G V E + +F EM +++VISW+ +I G + A F M E N++S+ +
Sbjct: 308 CGCVLEAKGVFHEMHERDVISWSIIIMGLAMYGYANEAFNFFAEMIEDGLEPNDISFMGL 367
Query: 137 LMGYTQCGRIQDAWELFKAMP 157
L T G + E F MP
Sbjct: 368 LTACTHAGLVDKGLEYFDMMP 388
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 116/233 (49%), Gaps = 17/233 (7%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDM 62
E N+ ++V Y + G A LF +M ++VVSW ++ G+ +D AR +FD
Sbjct: 159 ESNLFVRNSLVDLYFKVGCNCIAQKLFDEMVVRDVVSWNTLISGYCFSGMVDKARMVFDG 218
Query: 63 MPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKK-----NVISWTTMISGYVNNNRIDV 117
M EK++V+ + M+ GY ++ + + E+F +M + N ++ +++S + +D+
Sbjct: 219 MMEKNLVSWSTMISGYARNEKYADAIELFRQMQHEGGLAPNDVTLVSVLSACAHLGALDL 278
Query: 118 ARKLFEVMPEKNEVSWTAMLMG------YTQCGRIQDAWELFKAMPMKSVVASNSMILGL 171
+ + + +N++ + +G Y +CG + +A +F M + V++ + +I+GL
Sbjct: 279 GKWIHRFI-RRNKIE-VGLFLGNALADMYAKCGCVLEAKGVFHEMHERDVISWSIIIMGL 336
Query: 172 GQNGEVQKARVVFDQM----REKDDATWSGMIKVYERKGYELEVIDLFTLMQK 220
G +A F +M E +D ++ G++ G + ++ F +M +
Sbjct: 337 AMYGYANEAFNFFAEMIEDGLEPNDISFMGLLTACTHAGLVDKGLEYFDMMPQ 389
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 119/269 (44%), Gaps = 43/269 (15%)
Query: 173 QNGEVQKARVVFDQMREKDDA-TWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFP--- 228
+G ++ + ++F+ + ++ ++K + + I F + V N P
Sbjct: 70 SHGNLRHSVLIFNHFLSFPNIFAYNALLKAFSQHNAWHTTISYF---NNQLVLPNAPNPD 126
Query: 229 --SLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFD 286
+ SVL CA LA + G++VH + + + +++V + L+ +Y K G + +FD
Sbjct: 127 EYTFTSVLKACAGLAQVLEGQKVHCFVTKYGCESNLFVRNSLVDLYFKVGCNCIAQKLFD 186
Query: 287 NFASKDIVMWNSIISGYAQYGLGEKSLKVFH---------------------------EM 319
+D+V WN++ISGY G+ +K+ VF E+
Sbjct: 187 EMVVRDVVSWNTLISGYCFSGMVDKARMVFDGMMEKNLVSWSTMISGYARNEKYADAIEL 246
Query: 320 F-----SSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLL 374
F G+ P+DVTLV VLSAC++ G + G+ I ++ + +E + D+
Sbjct: 247 FRQMQHEGGLAPNDVTLVSVLSACAHLGALDLGKWIHRFIR-RNKIEVGLFLGNALADMY 305
Query: 375 GRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
+ G V +A + M E D I W ++
Sbjct: 306 AKCGCVLEAKGVFHEM-HERDVISWSIII 333
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 116/253 (45%), Gaps = 12/253 (4%)
Query: 226 NFPSLISVLSVCASLASLDHGRQVHAQLVRCQF-DVDVYVASV-LITMYIKCGELVKGKL 283
N I +L CA+ S+ ++ AQ++ +D + +V I + G L L
Sbjct: 20 NHRKTIHLLLRCATQLSMRQLFEIQAQIIASPIPSIDPNIIAVKFIGVSSSHGNLRHSVL 79
Query: 284 IFDNFAS-KDIVMWNSIISGYAQYGLGEKSLKVFHE--MFSSGVMPDDVTLVGVLSACSY 340
IF++F S +I +N+++ ++Q+ ++ F+ + + PD+ T VL AC+
Sbjct: 80 IFNHFLSFPNIFAYNALLKAFSQHNAWHTTISYFNNQLVLPNAPNPDEYTFTSVLKACAG 139
Query: 341 TGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWG 400
+V EG+++ +KY E +VDL + G A KL + M D + W
Sbjct: 140 LAQVLEGQKV-HCFVTKYGCESNLFVRNSLVDLYFKVGCNCIAQKLFDEMVVR-DVVSWN 197
Query: 401 SLL-GACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKR 459
+L+ G C + M +D A + +++ KN + + + YA ++ D EL + M+
Sbjct: 198 TLISGYCFSGM-VDKARMVFDGMME---KNLVSWSTMISGYARNEKYADAIELFRQMQHE 253
Query: 460 NVIKPPGCSWIEV 472
+ P + + V
Sbjct: 254 GGLAPNDVTLVSV 266
>gi|449464496|ref|XP_004149965.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Cucumis sativus]
gi|449497665|ref|XP_004160467.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Cucumis sativus]
Length = 938
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 213/621 (34%), Positives = 351/621 (56%), Gaps = 25/621 (4%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLF----WQMPEKNVVSWTVMLGGFIRDSRIDDA 56
MPER+++SW +M+ YV++G A +F W E N V++T L + +
Sbjct: 322 MPERDLISWNSMLACYVQDGRCLCALKVFAEMLWMKKEINYVTFTSALAACLDPEFFTNG 381
Query: 57 RRLFDMMP----EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+ L + + +++ ++ Y + ++ E +++F MPK + ++W +I G+ NN
Sbjct: 382 KILHGFVVVLGLQDELIIGNTLITFYGKCHKMAEAKKVFQRMPKLDKVTWNALIGGFANN 441
Query: 113 NRIDVARKLFEVMPEKNE--VSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVAS------ 164
++ A F++M E + V + ++ C +D + + +VV
Sbjct: 442 AELNEAVAAFKLMREGSTSGVDYITIVNILGSCLTHEDLIKYGIPIHAHTVVTGFDLDQH 501
Query: 165 --NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEG 222
+S+I + G++ + +FDQ+ K + W+ +I R G+ E + L M+ G
Sbjct: 502 VQSSLITMYAKCGDLHSSSYIFDQLVFKTSSVWNAIIAANARYGFGEEALKLVVRMRSAG 561
Query: 223 VRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGK 282
+ + + + LSV A LA L+ G+Q+H ++ F++D ++ + + MY KCGEL
Sbjct: 562 IEFDQFNFSTALSVAADLAMLEEGQQLHGSTIKLGFELDHFIINAAMDMYGKCGELDDAL 621
Query: 283 LIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTG 342
I + + WN++IS A++G K+ + FH+M GV P+ V+ V +LSACS+ G
Sbjct: 622 RILPQPTDRSRLSWNTLISISARHGQFHKAKETFHDMLKLGVKPNHVSFVCLLSACSHGG 681
Query: 343 KVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSL 402
V EG + SM S Y ++P EH CM+DLLGR+G++ +A I MP P+ ++W SL
Sbjct: 682 LVDEGLAYYASMTSVYGIQPGIEHCVCMIDLLGRSGRLVEAEAFITEMPIPPNDLVWRSL 741
Query: 403 LGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVI 462
L +CR + LDL AAK LL+L+P + Y+L SN++A+ GR+ DV ++R M +
Sbjct: 742 LASCRIYRNLDLGRKAAKHLLELDPSDDSAYVLYSNVFATIGRWEDVEDVRGQMGAHKIQ 801
Query: 463 KPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLR---EAGYCPDSSFVLHD 519
K P SW++ + + +F D HP + ++ K+ GL++ EAGY PD+S+ L D
Sbjct: 802 KKPAHSWVKWKGNISIFGMGD----QTHPQMEQINGKLLGLMKIVGEAGYVPDTSYSLQD 857
Query: 520 VDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREII 579
DEE+K H++ HSE++A+A+GL+ +PEG +R+ KNLRVCGDCHS K +S V+GR+I+
Sbjct: 858 TDEEQKEHNMWSHSERIALAFGLINIPEGSTVRIFKNLRVCGDCHSFFKFVSGVLGRKIV 917
Query: 580 LRDANRFHHFKDGLCSCRDYW 600
LRD RFHHF +G CSC DYW
Sbjct: 918 LRDPYRFHHFTNGNCSCSDYW 938
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 119/469 (25%), Positives = 213/469 (45%), Gaps = 40/469 (8%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
M ERN SW M+ GYV G EA F +++ + GF+ S + +
Sbjct: 18 MSERNEASWNHMMSGYVRVGSYVEAVLFF-----RDICGIGIKPSGFMIASLVTACNKSS 72
Query: 61 DMMPEK--------------DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMI 106
M E DV T+ V Y G V +++F+EMP +NV+SWT+++
Sbjct: 73 IMAKEGFQFHGFAIKCGLIYDVFVGTSFVHFYASYGIVSNAQKMFNEMPDRNVVSWTSLM 132
Query: 107 SGYVNN-NRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDA-------WELFKAMPM 158
Y +N ++ +V + E + + + + CG + D K
Sbjct: 133 VSYSDNGSKKEVINTYKRMRHEGICCNENNIALVISSCGFLMDIILGHQLLGHALKFGLE 192
Query: 159 KSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLM 218
V A+NS+I G G++ +A +F++M E+D +W+ +I + E F M
Sbjct: 193 TKVSAANSLIFMFGGCGDINEACSIFNEMNERDTISWNSIISANAQNTLHEESFRYFHWM 252
Query: 219 QKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGEL 278
+ +N+ +L +LS+C S+ L G+ VH V+ + ++ + + L+++Y G
Sbjct: 253 RLVHEEINYTTLSILLSICGSVDYLKWGKGVHGLAVKYGLESNICLCNTLLSVYSDAGRS 312
Query: 279 VKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSAC 338
+LIF +D++ WNS+++ Y Q G +LKVF EM + VT L+AC
Sbjct: 313 KDAELIFRRMPERDLISWNSMLACYVQDGRCLCALKVFAEMLWMKKEINYVTFTSALAAC 372
Query: 339 -----SYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFE 393
GK+ G + ++ + ++ ++ G+ ++ +A K+ + MP +
Sbjct: 373 LDPEFFTNGKILHGFVVVLGLQDELIIGNT------LITFYGKCHKMAEAKKVFQRMP-K 425
Query: 394 PDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYAS 442
D + W +L+G + +L+ A VAA KL++ + YI + NI S
Sbjct: 426 LDKVTWNALIGGFANNAELNEA-VAAFKLMREGSTSGVDYITIVNILGS 473
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 113/232 (48%), Gaps = 3/232 (1%)
Query: 175 GEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVL 234
G + A++VFD+M E+++A+W+ M+ Y R G +E + F + G++ + + S++
Sbjct: 6 GRINYAQLVFDRMSERNEASWNHMMSGYVRVGSYVEAVLFFRDICGIGIKPSGFMIASLV 65
Query: 235 SVCASLASL-DHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDI 293
+ C + + G Q H ++C DV+V + + Y G + + +F+ +++
Sbjct: 66 TACNKSSIMAKEGFQFHGFAIKCGLIYDVFVGTSFVHFYASYGIVSNAQKMFNEMPDRNV 125
Query: 294 VMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFES 353
V W S++ Y+ G ++ + + M G+ ++ + V+S+C + + G ++
Sbjct: 126 VSWTSLMVSYSDNGSKKEVINTYKRMRHEGICCNENNIALVISSCGFLMDIILGHQLL-G 184
Query: 354 MKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
K+ +E K ++ + G G + +A + M E D I W S++ A
Sbjct: 185 HALKFGLETKVSAANSLIFMFGGCGDINEACSIFNEMN-ERDTISWNSIISA 235
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 62/134 (46%), Gaps = 3/134 (2%)
Query: 271 MYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVT 330
MY K G + +L+FD + ++ WN ++SGY + G +++ F ++ G+ P
Sbjct: 1 MYSKFGRINYAQLVFDRMSERNEASWNHMMSGYVRVGSYVEAVLFFRDICGIGIKPSGFM 60
Query: 331 LVGVLSACSYTG-KVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEA 389
+ +++AC+ + KEG + F K + V G V +A K+
Sbjct: 61 IASLVTACNKSSIMAKEGFQ-FHGFAIKCGLIYDVFVGTSFVHFYASYGIVSNAQKMFNE 119
Query: 390 MPFEPDAIIWGSLL 403
MP + + + W SL+
Sbjct: 120 MP-DRNVVSWTSLM 132
>gi|115462637|ref|NP_001054918.1| Os05g0212100 [Oryza sativa Japonica Group]
gi|48475165|gb|AAT44234.1| unknown protein, contains PPR repeat [Oryza sativa Japonica Group]
gi|113578469|dbj|BAF16832.1| Os05g0212100 [Oryza sativa Japonica Group]
gi|215695208|dbj|BAG90399.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222630605|gb|EEE62737.1| hypothetical protein OsJ_17540 [Oryza sativa Japonica Group]
Length = 822
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 231/653 (35%), Positives = 369/653 (56%), Gaps = 74/653 (11%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF-DMM 63
++ +A++ G + A +F + EK VV WT+++ +++ ++A +F D +
Sbjct: 187 DIAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVEIFLDFL 246
Query: 64 P---EKDVVAQTNMV---------------------LGYCQDGRV--------------- 84
E D ++M+ +G+ D V
Sbjct: 247 EDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGFASDACVSCGLVDMYAKSNIEQ 306
Query: 85 --DEGREIFDEMPKKNVISWTTMISGYVNN----NRIDVARKLF-EVMPEK---NEVSWT 134
D ++F+ M K +VISWT +ISGYV + N++ V LF E++ E N ++++
Sbjct: 307 AMDYANKVFERMRKNDVISWTALISGYVQSGVQENKVMV---LFGEMLNESIKPNHITYS 363
Query: 135 AMLMGYTQCGRIQDA-------WELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQM 187
++L C I D + K+ + N+++ ++G +++AR VF+Q+
Sbjct: 364 SIL---KACANISDHDSGRQVHAHVIKSNQAAAHTVGNALVSMYAESGCMEEARRVFNQL 420
Query: 188 REKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGR 247
E+ S + + E + L+ + + + ++ + S++S AS+ L G+
Sbjct: 421 YER-----SMISCITEGRDAPLD-----HRIGRMDMGISSSTFASLISAAASVGMLTKGQ 470
Query: 248 QVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYG 307
Q+HA ++ F D +V++ L++MY +CG L F+ ++++ W S+ISG A++G
Sbjct: 471 QLHAMTLKAGFGSDRFVSNSLVSMYSRCGYLEDACRSFNELKDRNVISWTSMISGLAKHG 530
Query: 308 LGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHY 367
E++L +FH+M +GV P+DVT + VLSACS+ G V+EG+E F SM+ + + P+ EHY
Sbjct: 531 YAERALSLFHDMILTGVKPNDVTYIAVLSACSHVGLVREGKEYFRSMQRDHGLIPRMEHY 590
Query: 368 ACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEP 427
ACMVDLL R+G V++A++ I MP + DA++W +LLGACR+H +++ E+AAK +++LEP
Sbjct: 591 ACMVDLLARSGLVKEALEFINEMPLKADALVWKTLLGACRSHDNIEVGEIAAKNVIELEP 650
Query: 428 KNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSH 487
++ PY+LLSN+YA G + +VA +R MR N+ K G SW+EVE H F D SH
Sbjct: 651 RDPAPYVLLSNLYADAGLWDEVARIRSAMRDNNLNKETGLSWMEVENTTHEFRAGD-TSH 709
Query: 488 PEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPE 547
P I L+ + G ++ GY PD+S VLHD+ +E K L HSEK+AVA+GL+
Sbjct: 710 PRAQDIYGKLDTLVGEIKGMGYVPDTSIVLHDMSDELKEQYLLQHSEKIAVAFGLITTSA 769
Query: 548 GVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
PIR+ KNLRVC DCHSAIK +SK REIILRD+NRFH KDG CSC +YW
Sbjct: 770 PKPIRIFKNLRVCADCHSAIKYMSKATRREIILRDSNRFHRMKDGECSCGEYW 822
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 118/252 (46%), Gaps = 10/252 (3%)
Query: 159 KSVVASNSMILGLGQNGEVQKARVVFDQMRE-KDDATWSGMIKVYERKGYELEVIDLFTL 217
+ V +NS++ + G V AR VFD MR +D +W+ M R G E E + L
Sbjct: 82 RDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTAMASCLARNGAERESLLLIGE 141
Query: 218 MQKEGVRVNFPSLISVLSVC--ASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKC 275
M + G+ N +L +V C L L G + + D+ V S LI M +
Sbjct: 142 MLESGLLPNAYTLCAVAHACFPHELYCLVGGVVLGLVHKMGLWGTDIAVGSALIDMLARN 201
Query: 276 GELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVL 335
G+L + +FD K +V+W +IS Y Q E+++++F + G PD T+ ++
Sbjct: 202 GDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVEIFLDFLEDGFEPDRYTMSSMI 261
Query: 336 SACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAM----KLIEAMP 391
SAC+ G V+ G ++ S+ + +VD+ ++ +E AM K+ E M
Sbjct: 262 SACTELGSVRLGLQL-HSLALRMGFASDACVSCGLVDMYAKS-NIEQAMDYANKVFERMR 319
Query: 392 FEPDAIIWGSLL 403
+ D I W +L+
Sbjct: 320 -KNDVISWTALI 330
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 131/269 (48%), Gaps = 21/269 (7%)
Query: 1 MPERNVVSWTAMVRGYVEEGMI-TEAGTLFWQMPEKNV----VSWTVMLGGFIRDSRIDD 55
M + +V+SWTA++ GYV+ G+ + LF +M +++ ++++ +L S D
Sbjct: 318 MRKNDVISWTALISGYVQSGVQENKVMVLFGEMLNESIKPNHITYSSILKACANISDHDS 377
Query: 56 ARRLF-DMMPEKDVVAQT---NMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVN 111
R++ ++ A T +V Y + G ++E R +F+++ ++++IS T
Sbjct: 378 GRQVHAHVIKSNQAAAHTVGNALVSMYAESGCMEEARRVFNQLYERSMISCITEGRDAPL 437
Query: 112 NNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVA-----SNS 166
++RI R + + ++ +++ G + +L AM +K+ SNS
Sbjct: 438 DHRI--GRMDMGI----SSSTFASLISAAASVGMLTKGQQL-HAMTLKAGFGSDRFVSNS 490
Query: 167 MILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVN 226
++ + G ++ A F+++++++ +W+ MI + GY + LF M GV+ N
Sbjct: 491 LVSMYSRCGYLEDACRSFNELKDRNVISWTSMISGLAKHGYAERALSLFHDMILTGVKPN 550
Query: 227 FPSLISVLSVCASLASLDHGRQVHAQLVR 255
+ I+VLS C+ + + G++ + R
Sbjct: 551 DVTYIAVLSACSHVGLVREGKEYFRSMQR 579
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 78/164 (47%), Gaps = 10/164 (6%)
Query: 246 GRQVHAQLVRCQF-DVDVYVASVLITMYIKCGELVKGKLIFDNFAS-KDIVMWNSIISGY 303
GR +H +L+R D D VA+ L+T+Y +CG + + +FD +DIV W ++ S
Sbjct: 67 GRALHRRLLRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTAMASCL 126
Query: 304 AQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACS----YTGKVKEGREIFESMKSKYL 359
A+ G +SL + EM SG++P+ TL V AC Y + M L
Sbjct: 127 ARNGAERESLLLIGEMLESGLLPNAYTLCAVAHACFPHELYCLVGGVVLGLVHKMG---L 183
Query: 360 VEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
+ ++D+L R G + A K+ + + E ++W L+
Sbjct: 184 WGTDIAVGSALIDMLARNGDLASARKVFDGL-IEKTVVVWTLLI 226
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 69/142 (48%), Gaps = 18/142 (12%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM----PEKNVVSWTVMLG-----GFIRDS 51
+ +RNV+SWT+M+ G + G A +LF M + N V++ +L G +R+
Sbjct: 511 LKDRNVISWTSMISGLAKHGYAERALSLFHDMILTGVKPNDVTYIAVLSACSHVGLVREG 570
Query: 52 R--IDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMP-KKNVISWTTMISG 108
+ +R ++P + A MV + G V E E +EMP K + + W T++
Sbjct: 571 KEYFRSMQRDHGLIPRMEHYA--CMVDLLARSGLVKEALEFINEMPLKADALVWKTLLGA 628
Query: 109 YVNNNRIDV----ARKLFEVMP 126
+++ I+V A+ + E+ P
Sbjct: 629 CRSHDNIEVGEIAAKNVIELEP 650
>gi|15233584|ref|NP_193218.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274931|sp|O23337.1|PP311_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g14820
gi|2244839|emb|CAB10261.1| hypothetical protein [Arabidopsis thaliana]
gi|7268228|emb|CAB78524.1| hypothetical protein [Arabidopsis thaliana]
gi|332658106|gb|AEE83506.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 722
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 224/565 (39%), Positives = 336/565 (59%), Gaps = 19/565 (3%)
Query: 52 RIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVIS----WTTMIS 107
RI+ AR +FD M +DVV M+ YC+ G VDE ++F+EM NV+ ++S
Sbjct: 161 RINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVS 220
Query: 108 GYVNNNRIDVARKLFEVMPEKNEVS-----WTAMLMGYTQCGRIQDAWELFKAMPMKSVV 162
+ R ++E + E N+V TA++ Y G + A E F+ M ++++
Sbjct: 221 ACGRTGNMRYNRAIYEFLIE-NDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLF 279
Query: 163 ASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEG 222
S +M+ G + G + A+V+FDQ +KD W+ MI Y Y E + +F M G
Sbjct: 280 VSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSG 339
Query: 223 VRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGK 282
++ + S+ SV+S CA+L LD + VH+ + + ++ + + LI MY KCG L +
Sbjct: 340 IKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATR 399
Query: 283 LIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTG 342
+F+ +++V W+S+I+ + +G +L +F M V P++VT VGVL CS++G
Sbjct: 400 DVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSG 459
Query: 343 KVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSL 402
V+EG++IF SM +Y + PK EHY CMVDL GRA + +A+++IE+MP + +IWGSL
Sbjct: 460 LVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSL 519
Query: 403 LGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVI 462
+ ACR H +L+L + AAK++L+LEP + G +L+SNIYA + R+ DV +R+ M ++NV
Sbjct: 520 MSACRIHGELELGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVF 579
Query: 463 KPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDE 522
K G S I+ K H F D H + I L+++ L+ AGY PD VL DV+E
Sbjct: 580 KEKGLSRIDQNGKSHEFLIGD-KRHKQSNEIYAKLDEVVSKLKLAGYVPDCGSVLVDVEE 638
Query: 523 EEKVHSLRYHSEKLAVAYGLV-------KLPEGVPIRVMKNLRVCGDCHSAIKLISKVMG 575
EEK + +HSEKLA+ +GL+ K GV IR++KNLRVC DCH KL+SKV
Sbjct: 639 EEKKDLVLWHSEKLALCFGLMNEEKEEEKDSCGV-IRIVKNLRVCEDCHLFFKLVSKVYE 697
Query: 576 REIILRDANRFHHFKDGLCSCRDYW 600
REII+RD RFH +K+GLCSCRDYW
Sbjct: 698 REIIVRDRTRFHCYKNGLCSCRDYW 722
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 123/266 (46%), Gaps = 33/266 (12%)
Query: 175 GEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVL 234
G + AR VFD+M +D TW+ MI+ Y R G E LF M+ V + L +++
Sbjct: 160 GRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIV 219
Query: 235 SVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYI--------------------- 273
S C ++ + R ++ L+ +D ++ + L+TMY
Sbjct: 220 SACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLF 279
Query: 274 ----------KCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSG 323
KCG L ++IFD KD+V W ++IS Y + +++L+VF EM SG
Sbjct: 280 VSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSG 339
Query: 324 VMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDA 383
+ PD V++ V+SAC+ G + + + + + L E + ++++ + G ++
Sbjct: 340 IKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGL-ESELSINNALINMYAKCGGLDAT 398
Query: 384 MKLIEAMPFEPDAIIWGSLLGACRTH 409
+ E MP + + W S++ A H
Sbjct: 399 RDVFEKMP-RRNVVSWSSMINALSMH 423
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/357 (22%), Positives = 162/357 (45%), Gaps = 51/357 (14%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFI----RDSRIDDA 56
M R+VV+W M+ Y G++ EA LF +M + NV+ ++L + R +
Sbjct: 172 MSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYN 231
Query: 57 RRLFDMMPEKDVVAQTNMVLG----YCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
R +++ + E DV T+++ Y G +D RE F +M +N+ T M+SGY
Sbjct: 232 RAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKC 291
Query: 113 NRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAM----------PMKSVV 162
R+D A+ +F+ +K+ V WT M+ Y + Q+A +F+ M M SV+
Sbjct: 292 GRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVI 351
Query: 163 AS-----------------------------NSMILGLGQNGEVQKARVVFDQMREKDDA 193
++ N++I + G + R VF++M ++
Sbjct: 352 SACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVV 411
Query: 194 TWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQL 253
+WS MI G + + LF M++E V N + + VL C+ ++ G+++ A +
Sbjct: 412 SWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASM 471
Query: 254 VRCQFDVDVYVA--SVLITMYIKCGELVKGKLIFDNF-ASKDIVMWNSIISGYAQYG 307
++++ + ++ ++ + L + + ++ + ++V+W S++S +G
Sbjct: 472 TD-EYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHG 527
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 95/184 (51%), Gaps = 9/184 (4%)
Query: 211 VIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLIT 270
I + ++ G R++ S + +L + +++L G ++H + D +V + +
Sbjct: 95 TILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMD 154
Query: 271 MYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVT 330
MY CG + + +FD + +D+V WN++I Y ++GL +++ K+F EM S VMPD++
Sbjct: 155 MYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMI 214
Query: 331 LVGVLSACSYTGKVKEGREIFESMKSKYLVEP----KTEHYACMVDLLGRAGQVEDAMKL 386
L ++SAC TG ++ R I+E +L+E T +V + AG ++ A +
Sbjct: 215 LCNIVSACGRTGNMRYNRAIYE-----FLIENDVRMDTHLLTALVTMYAGAGCMDMAREF 269
Query: 387 IEAM 390
M
Sbjct: 270 FRKM 273
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 129/278 (46%), Gaps = 20/278 (7%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
M RN+ TAMV GY + G + +A +F Q +K++V WT M+ ++ +A R+F
Sbjct: 273 MSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVF 332
Query: 61 DMMP----EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISW----TTMISGYVNN 112
+ M + DVV+ +++ G +D+ + + + + S +I+ Y
Sbjct: 333 EEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKC 392
Query: 113 NRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSV----VASNSMI 168
+D R +FE MP +N VSW++M+ + G DA LF M ++V V ++
Sbjct: 393 GGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVL 452
Query: 169 LGLGQNGEVQKARVVFDQMREKDDAT-----WSGMIKVYERKGYELEVIDLFTLMQKEGV 223
G +G V++ + +F M ++ + T + M+ ++ R E +++ M V
Sbjct: 453 YGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMP---V 509
Query: 224 RVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVD 261
N S++S C L+ G+ +++ + D D
Sbjct: 510 ASNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHD 547
>gi|356570919|ref|XP_003553630.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Glycine max]
Length = 622
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 205/462 (44%), Positives = 296/462 (64%), Gaps = 2/462 (0%)
Query: 140 YTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMI 199
Y G I A +F+ M VV+ MI G + G+ + AR +FD+M E++ TWS MI
Sbjct: 162 YASVGDINAARSVFQRMCRFDVVSWTCMIAGYHRCGDAKSARELFDRMPERNLVTWSTMI 221
Query: 200 KVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFD 259
Y R + ++ F +Q EGV N ++ V+S CA L +L G + H ++R +
Sbjct: 222 SGYARNNCFEKAVETFEALQAEGVVANETVMVGVISSCAHLGALAMGEKAHEYVMRNKLS 281
Query: 260 VDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEM 319
+++ + + ++ MY +CG + K ++F+ KD++ W ++I+G A +G EK+L F EM
Sbjct: 282 LNLILGTAVVDMYARCGNVEKAVMVFEQLPEKDVLCWTALIAGLAMHGYAEKALWYFSEM 341
Query: 320 FSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQ 379
G +P D+T VL+ACS+ G V+ G EIFESMK + VEP+ EHY CMVDLLGRAG+
Sbjct: 342 AKKGFVPRDITFTAVLTACSHAGMVERGLEIFESMKRDHGVEPRLEHYGCMVDLLGRAGK 401
Query: 380 VEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNI 439
+ A K + MP +P+A IW +LLGACR H +++ E K LL+++P+ +G Y+LLSNI
Sbjct: 402 LRKAEKFVLKMPVKPNAPIWRALLGACRIHKNVEVGERVGKILLEMQPEYSGHYVLLSNI 461
Query: 440 YASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEK 499
YA ++ DV +R+ M+ + V KPPG S IE++ KVH FT D +HPE I R+ E
Sbjct: 462 YARANKWKDVTVMRQMMKDKGVRKPPGYSLIEIDGKVHEFTIGD-KTHPEIEKIERIWED 520
Query: 500 -IGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLR 558
I ++ AGY +++ + D+DEEEK +L HSEKLA+AYG++K+ PIR++KNLR
Sbjct: 521 IILPKIKLAGYVGNTAETMFDIDEEEKEGALHRHSEKLAIAYGIMKIRAPTPIRIVKNLR 580
Query: 559 VCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
VC DCH+A KLISKV E+I+RD NRFHHFK+G CSC DYW
Sbjct: 581 VCEDCHTATKLISKVFEVELIVRDRNRFHHFKEGTCSCMDYW 622
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 112/212 (52%), Gaps = 10/212 (4%)
Query: 53 IDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
I+ AR +F M DVV+ T M+ GY + G RE+FD MP++N+++W+TMISGY N
Sbjct: 168 INAARSVFQRMCRFDVVSWTCMIAGYHRCGDAKSARELFDRMPERNLVTWSTMISGYARN 227
Query: 113 NRIDVARKLFEVMPEKNEVSWTAMLMG-YTQCGRIQDAWELFKAMP--MKSVVASNSMIL 169
N + A + FE + + V+ +++G + C + KA M++ ++ N +IL
Sbjct: 228 NCFEKAVETFEALQAEGVVANETVMVGVISSCAHLGALAMGEKAHEYVMRNKLSLN-LIL 286
Query: 170 G------LGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGV 223
G + G V+KA +VF+Q+ EKD W+ +I GY + + F+ M K+G
Sbjct: 287 GTAVVDMYARCGNVEKAVMVFEQLPEKDVLCWTALIAGLAMHGYAEKALWYFSEMAKKGF 346
Query: 224 RVNFPSLISVLSVCASLASLDHGRQVHAQLVR 255
+ +VL+ C+ ++ G ++ + R
Sbjct: 347 VPRDITFTAVLTACSHAGMVERGLEIFESMKR 378
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 120/231 (51%), Gaps = 12/231 (5%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDM 62
E++ ++V Y G I A ++F +M +VVSWT M+ G+ R AR LFD
Sbjct: 149 EQDFYVQNSLVHMYASVGDINAARSVFQRMCRFDVVSWTCMIAGYHRCGDAKSARELFDR 208
Query: 63 MPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN----NRIDVA 118
MPE+++V + M+ GY ++ ++ E F+ + + V++ T++ G +++ + +
Sbjct: 209 MPERNLVTWSTMISGYARNNCFEKAVETFEALQAEGVVANETVMVGVISSCAHLGALAMG 268
Query: 119 RKLFE-VMPEK---NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQN 174
K E VM K N + TA++ Y +CG ++ A +F+ +P K V+ ++I GL +
Sbjct: 269 EKAHEYVMRNKLSLNLILGTAVVDMYARCGNVEKAVMVFEQLPEKDVLCWTALIAGLAMH 328
Query: 175 GEVQKARVVFDQMREKD----DATWSGMIKVYERKGYELEVIDLFTLMQKE 221
G +KA F +M +K D T++ ++ G +++F M+++
Sbjct: 329 GYAEKALWYFSEMAKKGFVPRDITFTAVLTACSHAGMVERGLEIFESMKRD 379
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 94/209 (44%), Gaps = 35/209 (16%)
Query: 233 VLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKD 292
++ CA L + G Q H Q ++ F+ D YV + L+ MY G++ + +F D
Sbjct: 123 LVKACAQLENAPMGMQTHGQAIKHGFEQDFYVQNSLVHMYASVGDINAARSVFQRMCRFD 182
Query: 293 IVMWNS-------------------------------IISGYAQYGLGEKSLKVFHEMFS 321
+V W +ISGYA+ EK+++ F + +
Sbjct: 183 VVSWTCMIAGYHRCGDAKSARELFDRMPERNLVTWSTMISGYARNNCFEKAVETFEALQA 242
Query: 322 SGVMPDDVTLVGVLSACSYTGKVKEGREIFES-MKSKYLVEPKTEHYACMVDLLGRAGQV 380
GV+ ++ +VGV+S+C++ G + G + E M++K + +VD+ R G V
Sbjct: 243 EGVVANETVMVGVISSCAHLGALAMGEKAHEYVMRNKLSLNLILG--TAVVDMYARCGNV 300
Query: 381 EDAMKLIEAMPFEPDAIIWGSLLGACRTH 409
E A+ + E +P E D + W +L+ H
Sbjct: 301 EKAVMVFEQLP-EKDVLCWTALIAGLAMH 328
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 105/217 (48%), Gaps = 18/217 (8%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MPERN+V+W+ M+ GY +A F + + VV+ ++ G I A +
Sbjct: 209 MPERNLVTWSTMISGYARNNCFEKAVETFEALQAEGVVANETVMVGVISSCAHLGALAMG 268
Query: 61 DMMPEKDVVAQ--TNMVLG------YCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+ E + + N++LG Y + G V++ +F+++P+K+V+ WT +I+G +
Sbjct: 269 EKAHEYVMRNKLSLNLILGTAVVDMYARCGNVEKAVMVFEQLPEKDVLCWTALIAGLAMH 328
Query: 113 NRIDVARKLFEVMPEKN----EVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVAS---- 164
+ A F M +K ++++TA+L + G ++ E+F++M V
Sbjct: 329 GYAEKALWYFSEMAKKGFVPRDITFTAVLTACSHAGMVERGLEIFESMKRDHGVEPRLEH 388
Query: 165 -NSMILGLGQNGEVQKARVVFDQMREKDDA-TWSGMI 199
M+ LG+ G+++KA +M K +A W ++
Sbjct: 389 YGCMVDLLGRAGKLRKAEKFVLKMPVKPNAPIWRALL 425
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 43/215 (20%), Positives = 86/215 (40%), Gaps = 37/215 (17%)
Query: 223 VRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGE--LVK 280
+R+ P L+ +L C++ L + +HA ++R DV+ AS LI I L
Sbjct: 14 LRLKNPKLV-LLECCSNARDL---KIIHAHMLRTHLFFDVFAASRLIAFCIDSTTNLLHY 69
Query: 281 GKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSY 340
+ + ++ ++N++I G + E S + + G++PD++T ++ AC+
Sbjct: 70 AIRVASQIQNPNLFIYNALIRGCSTSENPENSFHYYIKALRFGLLPDNITHPFLVKACAQ 129
Query: 341 -----TGKVKEGREIFESMKSKYLVEPKTEH-------------------------YACM 370
G G+ I + + V+ H + CM
Sbjct: 130 LENAPMGMQTHGQAIKHGFEQDFYVQNSLVHMYASVGDINAARSVFQRMCRFDVVSWTCM 189
Query: 371 VDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
+ R G + A +L + MP E + + W +++
Sbjct: 190 IAGYHRCGDAKSARELFDRMP-ERNLVTWSTMISG 223
>gi|449438556|ref|XP_004137054.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Cucumis sativus]
gi|449479088|ref|XP_004155501.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Cucumis sativus]
Length = 855
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 234/662 (35%), Positives = 357/662 (53%), Gaps = 67/662 (10%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQMPEK-------NVVSWTVMLGGFIRDSRIDDAR 57
++VSW +++ YV+ G A + ++M + ++ +L + +
Sbjct: 195 DIVSWNSILAAYVQGGQSRTALRIAFRMGNHYSLKLRPDAITLVNILPACASVFALQHGK 254
Query: 58 RLFDMMPEK----DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNN 113
++ DV +V Y + +++E ++F+ + KK+V+SW M++GY
Sbjct: 255 QVHGFSVRNGLVDDVFVGNALVSMYAKCSKMNEANKVFEGIKKKDVVSWNAMVTGYSQIG 314
Query: 114 RIDVARKLFEVMPEKN----EVSWTAMLMGYTQCGRIQDAWELFKAMPM----KSVVASN 165
D A LF++M E++ ++W+A++ GY Q G +A ++F+ M + +VV
Sbjct: 315 SFDSALSLFKMMQEEDIKLDVITWSAVIAGYAQKGHGFEALDVFRQMQLYGLEPNVVTLA 374
Query: 166 SMILGLGQNGEV------------------------------------------QKARVV 183
S++ G G + + AR +
Sbjct: 375 SLLSGCASVGALLYGKQTHAYVIKNILNLNWNDKEDDLLVLNGLIDMYAKCKSYRVARSI 434
Query: 184 FDQMREKDD--ATWSGMIKVYERKGYELEVIDLFT--LMQKEGVRVNFPSLISVLSVCAS 239
FD + KD TW+ MI Y + G + + LF QK ++ N +L L CA
Sbjct: 435 FDSIEGKDKNVVTWTVMIGGYAQHGEANDALKLFAQIFKQKTSLKPNAFTLSCALMACAR 494
Query: 240 LASLDHGRQVHAQLVRCQFDVDV-YVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNS 298
L L GRQ+HA +R + + +V YV + LI MY K G++ + +FDN +++V W S
Sbjct: 495 LGELRLGRQLHAYALRNENESEVLYVGNCLIDMYSKSGDIDAARAVFDNMKLRNVVSWTS 554
Query: 299 IISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKY 358
+++GY +G GE++L +F +M G D +T + VL ACS++G V +G F M +
Sbjct: 555 LMTGYGMHGRGEEALHLFDQMQKLGFAVDGITFLVVLYACSHSGMVDQGMIYFHDMVKGF 614
Query: 359 LVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVA 418
+ P EHYACMVDLLGRAG++ +AM+LI+ M EP A++W +LL A R H ++L E A
Sbjct: 615 GITPGAEHYACMVDLLGRAGRLNEAMELIKNMSMEPTAVVWVALLSASRIHANIELGEYA 674
Query: 419 AKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHM 478
A KL +L +N G Y LLSN+YA+ R+ DVA +R M+ + K PGCSWI+ +K
Sbjct: 675 ASKLTELGAENDGSYTLLSNLYANARRWKDVARIRSLMKHTGIRKRPGCSWIQGKKSTTT 734
Query: 479 FTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAV 538
F D SHPE I +L + +++ GY P +SF LHDVD+EEK L HSEKLAV
Sbjct: 735 FFVGD-RSHPESEQIYNLLLDLIKRIKDMGYVPQTSFALHDVDDEEKGDLLFEHSEKLAV 793
Query: 539 AYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRD 598
AYG++ G PIR+ KNLR+CGDCHSA+ IS ++ EI+LRD++RFHHFK G CSCR
Sbjct: 794 AYGILTTAPGQPIRIHKNLRICGDCHSALTYISMIIDHEIVLRDSSRFHHFKKGSCSCRS 853
Query: 599 YW 600
YW
Sbjct: 854 YW 855
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 111/435 (25%), Positives = 204/435 (46%), Gaps = 63/435 (14%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQMPEK---NVVSWTVMLGGFIRDSRIDDARRL-- 59
NV ++V Y G + +A +F ++ E+ ++VSW +L +++ + A R+
Sbjct: 161 NVFICNSIVAMYGRCGALDDAHQMFDEVLERKIEDIVSWNSILAAYVQGGQSRTALRIAF 220
Query: 60 -----FDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKK----NVISWTTMISGYV 110
+ + D + N++ + G+++ + +V ++S Y
Sbjct: 221 RMGNHYSLKLRPDAITLVNILPACASVFALQHGKQVHGFSVRNGLVDDVFVGNALVSMYA 280
Query: 111 NNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILG 170
++++ A K+FE + +K+ VSW AM+ GY+Q G A LFK M + +
Sbjct: 281 KCSKMNEANKVFEGIKKKDVVSWNAMVTGYSQIGSFDSALSLFKMMQEEDI--------- 331
Query: 171 LGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSL 230
+ D TWS +I Y +KG+ E +D+F MQ G+ N +L
Sbjct: 332 ------------------KLDVITWSAVIAGYAQKGHGFEALDVFRQMQLYGLEPNVVTL 373
Query: 231 ISVLSVCASLASLDHGRQVHAQLVRCQFDV-------DVYVASVLITMYIKCGELVKGKL 283
S+LS CAS+ +L +G+Q HA +++ ++ D+ V + LI MY KC +
Sbjct: 374 ASLLSGCASVGALLYGKQTHAYVIKNILNLNWNDKEDDLLVLNGLIDMYAKCKSYRVARS 433
Query: 284 IFDNFASKD--IVMWNSIISGYAQYGLGEKSLKVFHEMF--SSGVMPDDVTLVGVLSACS 339
IFD+ KD +V W +I GYAQ+G +LK+F ++F + + P+ TL L AC+
Sbjct: 434 IFDSIEGKDKNVVTWTVMIGGYAQHGEANDALKLFAQIFKQKTSLKPNAFTLSCALMACA 493
Query: 340 YTGKVKEGREIFESMKSKYLVEPKTEHYA-----CMVDLLGRAGQVEDAMKLIEAMPFEP 394
G+++ GR++ Y + + E C++D+ ++G ++ A + + M
Sbjct: 494 RLGELRLGRQL-----HAYALRNENESEVLYVGNCLIDMYSKSGDIDAARAVFDNMKLR- 547
Query: 395 DAIIWGSLLGACRTH 409
+ + W SL+ H
Sbjct: 548 NVVSWTSLMTGYGMH 562
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 132/309 (42%), Gaps = 63/309 (20%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEK----NVVSWTVMLGGFIRDSRIDDA 56
+ +++VVSW AMV GY + G A +LF M E+ +V++W+ ++ G+ + +A
Sbjct: 295 IKKKDVVSWNAMVTGYSQIGSFDSALSLFKMMQEEDIKLDVITWSAVIAGYAQKGHGFEA 354
Query: 57 RRLFDMMP----EKDVVAQTNMVLGYCQDGRVDEG------------------------- 87
+F M E +VV +++ G G + G
Sbjct: 355 LDVFRQMQLYGLEPNVVTLASLLSGCASVGALLYGKQTHAYVIKNILNLNWNDKEDDLLV 414
Query: 88 -----------------REIFD--EMPKKNVISWTTMISGYVNNNRIDVARKLF-EVMPE 127
R IFD E KNV++WT MI GY + + A KLF ++ +
Sbjct: 415 LNGLIDMYAKCKSYRVARSIFDSIEGKDKNVVTWTVMIGGYAQHGEANDALKLFAQIFKQ 474
Query: 128 K-----NEVSWTAMLM-----GYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEV 177
K N + + LM G + GR A+ L + + N +I ++G++
Sbjct: 475 KTSLKPNAFTLSCALMACARLGELRLGRQLHAYALRNENESEVLYVGNCLIDMYSKSGDI 534
Query: 178 QKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVC 237
AR VFD M+ ++ +W+ ++ Y G E + LF MQK G V+ + + VL C
Sbjct: 535 DAARAVFDNMKLRNVVSWTSLMTGYGMHGRGEEALHLFDQMQKLGFAVDGITFLVVLYAC 594
Query: 238 ASLASLDHG 246
+ +D G
Sbjct: 595 SHSGMVDQG 603
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 105/215 (48%), Gaps = 8/215 (3%)
Query: 195 WSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLV 254
W+ +I+ + G + + + MQ+ G + + VL C + SL HG VHA +
Sbjct: 95 WNALIRRSVKLGLLDDTLGFYCQMQRLGWLPDHYTFPFVLKACGEIPSLRHGASVHAIVC 154
Query: 255 RCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASK---DIVMWNSIISGYAQYGLGEK 311
+V++ + ++ MY +CG L +FD + DIV WNSI++ Y Q G
Sbjct: 155 ANGLGSNVFICNSIVAMYGRCGALDDAHQMFDEVLERKIEDIVSWNSILAAYVQGGQSRT 214
Query: 312 SLKVFHEM---FSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYA 368
+L++ M +S + PD +TLV +L AC+ ++ G+++ LV+ A
Sbjct: 215 ALRIAFRMGNHYSLKLRPDAITLVNILPACASVFALQHGKQVHGFSVRNGLVDDVFVGNA 274
Query: 369 CMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
+V + + ++ +A K+ E + + D + W +++
Sbjct: 275 -LVSMYAKCSKMNEANKVFEGIK-KKDVVSWNAMV 307
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 81/184 (44%), Gaps = 19/184 (10%)
Query: 230 LISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVA--SVLITMYIKCGELVKGKLIFDN 287
LIS+L C +L ++A+L Q V + S + YI+CG + +
Sbjct: 33 LISLLRQCKTL--------INAKLAHQQIFVHGFTEMFSYAVGAYIECGASAEAVSLLQR 84
Query: 288 F--ASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVK 345
+ + WN++I + GL + +L + +M G +PD T VL AC ++
Sbjct: 85 LIPSHSTVFWWNALIRRSVKLGLLDDTLGFYCQMQRLGWLPDHYTFPFVLKACGEIPSLR 144
Query: 346 EGREIFESMKSKYLVEPKTEHYAC--MVDLLGRAGQVEDAMKLIEAMPFEP--DAIIWGS 401
G + + + L + + C +V + GR G ++DA ++ + + D + W S
Sbjct: 145 HGASVHAIVCANGL---GSNVFICNSIVAMYGRCGALDDAHQMFDEVLERKIEDIVSWNS 201
Query: 402 LLGA 405
+L A
Sbjct: 202 ILAA 205
Score = 43.1 bits (100), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 74/164 (45%), Gaps = 19/164 (11%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV----VSWTVMLGGFIRDSRID-- 54
M RNVVSWT+++ GY G EA LF QM + +++ V+L +D
Sbjct: 544 MKLRNVVSWTSLMTGYGMHGRGEEALHLFDQMQKLGFAVDGITFLVVLYACSHSGMVDQG 603
Query: 55 -----DARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMP-KKNVISWTTMISG 108
D + F + P + A +LG + GR++E E+ M + + W ++S
Sbjct: 604 MIYFHDMVKGFGITPGAEHYACMVDLLG--RAGRLNEAMELIKNMSMEPTAVVWVALLSA 661
Query: 109 YVNNNRIDV----ARKLFEVMPEKNEVSWTAMLMGYTQCGRIQD 148
+ I++ A KL E+ E N+ S+T + Y R +D
Sbjct: 662 SRIHANIELGEYAASKLTELGAE-NDGSYTLLSNLYANARRWKD 704
>gi|297598430|ref|NP_001045574.2| Os01g0977400 [Oryza sativa Japonica Group]
gi|255674132|dbj|BAF07488.2| Os01g0977400, partial [Oryza sativa Japonica Group]
Length = 687
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 226/641 (35%), Positives = 350/641 (54%), Gaps = 63/641 (9%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRID--------------- 54
TA++ YV+ + +A +F MP +++V+W ML G+
Sbjct: 49 TALLDMYVKCACLPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHR 108
Query: 55 ---DARRLFDMMP---EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISG 108
+A L ++P ++ +AQ V YC + R ++ V+ T ++
Sbjct: 109 LRPNASTLVALLPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKL-TDGVLLGTALLDM 167
Query: 109 YVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSV------- 161
Y + AR++F+ MP +NEV+W+A++ G+ C R+ A+ LFKAM + +
Sbjct: 168 YAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTS 227
Query: 162 ---------------------------------VASNSMILGLGQNGEVQKARVVFDQMR 188
A NS++ + G + +A +FD+M
Sbjct: 228 IASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMA 287
Query: 189 EKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQ 248
KD ++S ++ Y + G E +F MQ V + +++S++ C+ LA+L HGR
Sbjct: 288 VKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRC 347
Query: 249 VHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGL 308
H ++ + + + LI MY KCG + + +F+ S+DIV WN++I+GY +GL
Sbjct: 348 SHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGL 407
Query: 309 GEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYA 368
G+++ +F EM + G PD VT + +LSACS++G V EG+ F M Y + P+ EHY
Sbjct: 408 GKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYI 467
Query: 369 CMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPK 428
CMVDLL R G +++A + I++MP D +W +LLGACR + +DL + ++ + +L P+
Sbjct: 468 CMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPE 527
Query: 429 NAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHP 488
G ++LLSNIY++ GRF + AE+R + + K PGCSWIE+ +H F G D SHP
Sbjct: 528 GTGNFVLLSNIYSAAGRFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGD-QSHP 586
Query: 489 EHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEG 548
+ P I R L+ I +++ GY PD+SFVL D++EEEK +L HSEKLA+AYG++ L E
Sbjct: 587 QSPEIYRELDNILVGIKKLGYQPDTSFVLQDLEEEEKEKALICHSEKLAIAYGILSLSED 646
Query: 549 VPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHF 589
I V KNLRVCGDCH+ IK IS V R II+RDANRFHHF
Sbjct: 647 KTIFVTKNLRVCGDCHTVIKHISLVKRRAIIVRDANRFHHF 687
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/368 (24%), Positives = 172/368 (46%), Gaps = 27/368 (7%)
Query: 65 EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN--------NRID 116
+ D+ T ++ Y + + + IF MP +++++W M++GY ++ + +
Sbjct: 42 QADLFVSTALLDMYVKCACLPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLS 101
Query: 117 VARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELF--------------KAMPMKSVV 162
+ ++ + P N + A+L Q G + + K+ V+
Sbjct: 102 MQMQMHRLRP--NASTLVALLPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVL 159
Query: 163 ASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEG 222
+++ + G + AR VFD M +++ TWS +I + + LF M +G
Sbjct: 160 LGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQG 219
Query: 223 VRVNFP-SLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKG 281
+ P S+ S L CASL L G Q+HA L + D+ + L++MY K G + +
Sbjct: 220 LCFLSPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQA 279
Query: 282 KLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYT 341
+FD A KD V +++++SGY Q G E++ VF +M + V PD T+V ++ ACS+
Sbjct: 280 IALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHL 339
Query: 342 GKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGS 401
++ GR S+ + L +T ++D+ + G+++ + ++ MP D + W +
Sbjct: 340 AALQHGRCSHGSVIIRGLAS-ETSICNALIDMYAKCGRIDLSRQVFNMMP-SRDIVSWNT 397
Query: 402 LLGACRTH 409
++ H
Sbjct: 398 MIAGYGIH 405
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 126/294 (42%), Gaps = 58/294 (19%)
Query: 2 PERN--------VVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRI 53
P RN V+ TA++ Y + G + A +F MP +N V+W+ ++GGF+ SR+
Sbjct: 146 PNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRM 205
Query: 54 DDARRLFDMMPEK----------------------------------------DVVAQTN 73
A LF M + D+ A +
Sbjct: 206 TQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNS 265
Query: 74 MVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMP----EKN 129
++ Y + G +D+ +FDEM K+ +S++ ++SGYV N R + A +F+ M E +
Sbjct: 266 LLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPD 325
Query: 130 EVSWTAML-----MGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVF 184
+ +++ + Q GR + + + ++ + N++I + G + +R VF
Sbjct: 326 AATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSIC-NALIDMYAKCGRIDLSRQVF 384
Query: 185 DQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCA 238
+ M +D +W+ MI Y G E LF M G + + I +LS C+
Sbjct: 385 NMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACS 438
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 93/198 (46%), Gaps = 12/198 (6%)
Query: 218 MQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGE 277
M + V N + L C++LA GR +H + D++V++ L+ MY+KC
Sbjct: 1 MLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCAC 60
Query: 278 LVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLK--VFHEMFSSGVMPDDVTLVGVL 335
L IF ++D+V WN++++GYA +G+ ++ + +M + P+ TLV +L
Sbjct: 61 LPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALL 120
Query: 336 SACSYTGKVKEGREIFE---------SMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKL 386
+ G + +G + + SK + ++D+ + G + A ++
Sbjct: 121 PLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRV 180
Query: 387 IEAMPFEPDAIIWGSLLG 404
+AMP + + W +L+G
Sbjct: 181 FDAMPAR-NEVTWSALIG 197
>gi|357127388|ref|XP_003565363.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Brachypodium distachyon]
Length = 814
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 229/647 (35%), Positives = 356/647 (55%), Gaps = 57/647 (8%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMP 64
NVV ++ Y + G++ A +F +MP ++ V++ M+ G ++ +A LF M
Sbjct: 174 NVVVCNTLLDAYCKHGLLAAARRVFQEMPHRDSVTYNAMMMGCSKEGSHAEALDLFAAMR 233
Query: 65 EKDVVAQT---NMVLGYCQD-GRVDEGREIFDEMPK---KNVISWTTMISGYVNNNRIDV 117
K + A + VL G + GR++ + + NV +++ Y + +D
Sbjct: 234 RKGLAATRFTFSTVLTVATGVGDLCLGRQVHGLVARATSSNVFVNNSLLDFYSKCDCLDE 293
Query: 118 ARKLFEVMPEKNEVSWTAMLMGY--TQCGRIQDAWELFK----------AMPMKSV--VA 163
+KLF M E++ VS+ M+ GY +C I LF+ A+P S+ VA
Sbjct: 294 MKKLFHEMIERDNVSYNVMIAGYAWNRCASI--VLRLFREMQSLSFDRQALPYASLLSVA 351
Query: 164 SNSMILGLGQN---------------------------GEVQKARVVFDQMREKDDATWS 196
+ +G+G+ G + A+ F +K +W+
Sbjct: 352 GSVPHIGIGKQIHAQLVLLGLSSEDLVGNALIDMYSKCGMLDAAKTNFINKNDKTGVSWT 411
Query: 197 GMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRC 256
MI + G + E + LF M++ G+ + + S + ++LA + GRQ+H+ L+R
Sbjct: 412 AMITGCVQNGQQEEALQLFCGMRRAGLSPDRATFSSTIKASSNLAMIGLGRQLHSYLIRS 471
Query: 257 QFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVF 316
V+ S L+ MY KCG L + FD ++ + WN++IS YA YG + ++K+F
Sbjct: 472 GHMSSVFSGSALLDMYTKCGCLDEALQTFDEMPERNSISWNAVISAYAHYGQAKNAIKMF 531
Query: 317 HEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGR 376
M G PD VT + VLSACS+ G +E + FE M+ +Y + P EHY+C++D LGR
Sbjct: 532 EGMLCYGFKPDSVTFLSVLSACSHNGLAEECMKYFELMEYEYGISPWKEHYSCVIDTLGR 591
Query: 377 AGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILL 436
G+ + +++ MPFE D IIW S+L +CRTH DLA VAA+KL + +A PY++L
Sbjct: 592 VGRFDKVQEMLGEMPFEDDPIIWSSILHSCRTHGNQDLARVAAEKLFSMGSTDATPYVIL 651
Query: 437 SNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRM 496
SNI+A G++ D A ++K MR R + K G SW+EV+ KV+ F+ D +PMI +
Sbjct: 652 SNIFAKAGKWEDAAGVKKIMRDRGLRKETGYSWVEVKHKVYSFSSND----QTNPMITEI 707
Query: 497 LEKIGGLLRE---AGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRV 553
+++ L +E GY PD+S L VD++ K+ SL+YHSE+LA+A+ L+ P G PIRV
Sbjct: 708 KDELERLYKEMDKQGYKPDTSCTLQQVDDDIKLESLKYHSERLAIAFALINTPPGTPIRV 767
Query: 554 MKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
MKNL C DCHSAIK++SK++ R+II+RD++RFHHFKDG CSC DYW
Sbjct: 768 MKNLSACVDCHSAIKMMSKIVNRDIIVRDSSRFHHFKDGFCSCGDYW 814
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 127/466 (27%), Positives = 208/466 (44%), Gaps = 69/466 (14%)
Query: 1 MPERN-VVSWTAMVRGYVEEGMITEAGTLFWQMPE--KNVVSWTVMLGGFIR--DSRIDD 55
MP RN S M+ GY G ++ A LF P ++ V+WTVM+G F +R D
Sbjct: 60 MPHRNNAFSLNRMLSGYSRSGQLSAAHHLFLSSPPHLRDAVTWTVMIGAFASAPGARASD 119
Query: 56 ARRLF-DMMPE---KDVVAQTNMVLGYCQDGRVDEGREIFDEMP--------KKNVISWT 103
A LF DM+ E D V ++ G I P NV+
Sbjct: 120 AVSLFRDMLREGVAPDRVTVATVLNLPPASGGTAAAIIIASLHPFALKLGLLHSNVVVCN 179
Query: 104 TMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVA 163
T++ Y + + AR++F+ MP ++ V++ AM+MG ++ G +A +LF AM K + A
Sbjct: 180 TLLDAYCKHGLLAAARRVFQEMPHRDSVTYNAMMMGCSKEGSHAEALDLFAAMRRKGLAA 239
Query: 164 S--------------NSMILGLGQNGEVQKA------------------------RVVFD 185
+ + LG +G V +A + +F
Sbjct: 240 TRFTFSTVLTVATGVGDLCLGRQVHGLVARATSSNVFVNNSLLDFYSKCDCLDEMKKLFH 299
Query: 186 QMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDH 245
+M E+D+ +++ MI Y V+ LF MQ S+LSV S+ +
Sbjct: 300 EMIERDNVSYNVMIAGYAWNRCASIVLRLFREMQSLSFDRQALPYASLLSVAGSVPHIGI 359
Query: 246 GRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQ 305
G+Q+HAQLV + V + LI MY KCG L K F N K V W ++I+G Q
Sbjct: 360 GKQIHAQLVLLGLSSEDLVGNALIDMYSKCGMLDAAKTNFINKNDKTGVSWTAMITGCVQ 419
Query: 306 YGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTE 365
G E++L++F M +G+ PD T + A S + GR++ YL+ ++
Sbjct: 420 NGQQEEALQLFCGMRRAGLSPDRATFSSTIKASSNLAMIGLGRQLHS-----YLI--RSG 472
Query: 366 HY------ACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
H + ++D+ + G +++A++ + MP E ++I W +++ A
Sbjct: 473 HMSSVFSGSALLDMYTKCGCLDEALQTFDEMP-ERNSISWNAVISA 517
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 96/385 (24%), Positives = 171/385 (44%), Gaps = 24/385 (6%)
Query: 41 TVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTN-MVLGYCQDGRVDEGREIFDEMPK--K 97
++L I R+ AR LFD MP ++ N M+ GY + G++ +F P +
Sbjct: 38 NLLLHSLISSGRLAQARALFDQMPHRNNAFSLNRMLSGYSRSGQLSAAHHLFLSSPPHLR 97
Query: 98 NVISWTTMISGYVN--NNRIDVARKLFE------VMPEKNEVSWTAML---MGYTQCGRI 146
+ ++WT MI + + R A LF V P++ V+ L G T I
Sbjct: 98 DAVTWTVMIGAFASAPGARASDAVSLFRDMLREGVAPDRVTVATVLNLPPASGGTAAAII 157
Query: 147 QDAWELFK---AMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYE 203
+ F + +VV N+++ ++G + AR VF +M +D T++ M+
Sbjct: 158 IASLHPFALKLGLLHSNVVVCNTLLDAYCKHGLLAAARRVFQEMPHRDSVTYNAMMMGCS 217
Query: 204 RKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVY 263
++G E +DLF M+++G+ + +VL+V + L GRQVH + R +V+
Sbjct: 218 KEGSHAEALDLFAAMRRKGLAATRFTFSTVLTVATGVGDLCLGRQVHGLVARAT-SSNVF 276
Query: 264 VASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSG 323
V + L+ Y KC L + K +F +D V +N +I+GYA L++F EM S
Sbjct: 277 VNNSLLDFYSKCDCLDEMKKLFHEMIERDNVSYNVMIAGYAWNRCASIVLRLFREMQSLS 336
Query: 324 VMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYA--CMVDLLGRAGQVE 381
+ +LS + G++I + L+ +E ++D+ + G +
Sbjct: 337 FDRQALPYASLLSVAGSVPHIGIGKQIHAQL---VLLGLSSEDLVGNALIDMYSKCGML- 392
Query: 382 DAMKLIEAMPFEPDAIIWGSLLGAC 406
DA K + + W +++ C
Sbjct: 393 DAAKTNFINKNDKTGVSWTAMITGC 417
>gi|413937268|gb|AFW71819.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 830
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 218/635 (34%), Positives = 354/635 (55%), Gaps = 46/635 (7%)
Query: 11 AMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSR-------IDDARRLFDMM 63
+++ Y + G++ EA +F +M +++VSW ++ G + + R D+R M+
Sbjct: 197 SLMNMYAKCGLVEEARVVFCRMETRDMVSWNTLMAGLVLNGRDLEALQLFHDSRSSITML 256
Query: 64 PEKDVVAQTNMV-----LG---------------------------YCQDGRVDEGREIF 91
E N+ LG Y + G++D+ ++F
Sbjct: 257 TESTYSTVINLCANLKHLGLARQLHSSVLKHGFHSYGNVMTALMDAYNKAGQLDKALDVF 316
Query: 92 DEMP-KKNVISWTTMISGYVNNNRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRI 146
M +NV+SWT MI G + N I +A LF M E N+++++ +L
Sbjct: 317 LLMSGSQNVVSWTAMIDGCIQNGDIPLAAALFSRMREDGVAPNDLTYSTILTVSEASFPP 376
Query: 147 QDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKG 206
Q ++ K + ++++ + ++A +F + +KD +WS M+ Y + G
Sbjct: 377 QIHAQVIKTNYECTPTVGTALMVSYSKLCSTEEALSIFKMIDQKDVVSWSAMLTCYAQAG 436
Query: 207 YELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLAS-LDHGRQVHAQLVRCQFDVDVYVA 265
+ F M G++ N ++ S + CAS A+ +D GRQ HA ++ + + V+
Sbjct: 437 DCNGATNAFIKMTMHGLKPNEFTISSAIDACASPAAGVDLGRQFHAISIKHRCHDALCVS 496
Query: 266 SVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVM 325
S L++MY + G + + +F+ +D++ WNS++SGYAQ+G +K+L VF +M G+
Sbjct: 497 SALVSMYARKGSIENAQCVFERQTDRDLLSWNSMLSGYAQHGYSQKALDVFRQMEVEGID 556
Query: 326 PDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMK 385
D +T + V+ C++ G V+EG++ F+ M Y + P +HYACMVDL RAG++++ M
Sbjct: 557 MDGLTFLSVIMGCAHAGLVEEGQQYFDLMVRDYGITPTMDHYACMVDLYSRAGKLDETMS 616
Query: 386 LIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGR 445
LIE MPF IW +LLGACR H ++L ++AA+KLL LEP ++ Y+LLSNIY++ G+
Sbjct: 617 LIEGMPFPAGPTIWRALLGACRVHKNVELGKLAAEKLLSLEPLDSATYVLLSNIYSAAGK 676
Query: 446 FHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLR 505
+ + E+RK M + V K GCSWI+++ KVH F D SHP I L + L+
Sbjct: 677 WKEKDEVRKLMDTKKVRKEAGCSWIQIKNKVHFFIASD-KSHPLSEQIYAKLRAMTAKLK 735
Query: 506 EAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHS 565
+ GYCPD+SFV HDV E++K L HSE+LA+A+GL+ P P+ + KNLRV GD H+
Sbjct: 736 QEGYCPDTSFVPHDVAEDQKEAMLAMHSERLALAFGLIATPPAAPLHIFKNLRVSGDGHT 795
Query: 566 AIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
+K++S++ REI++RD RFHHFK G+CSC D+W
Sbjct: 796 VMKMVSEIEDREIVMRDCCRFHHFKSGVCSCGDFW 830
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 127/240 (52%), Gaps = 1/240 (0%)
Query: 176 EVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLS 235
V R VF+ M +++ TW+ ++ Y + G L+V+ LF M+ EGV N + SVLS
Sbjct: 106 SVLDGRKVFEGMLKRNVVTWTSLLTGYIQAGVLLDVMSLFFRMRAEGVWPNPFTFSSVLS 165
Query: 236 VCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVM 295
+ AS +D G+ VHAQ ++ V+V + L+ MY KCG + + +++F ++D+V
Sbjct: 166 MVASQGMVDLGQHVHAQSIKFGCCSTVFVCNSLMNMYAKCGLVEEARVVFCRMETRDMVS 225
Query: 296 WNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMK 355
WN++++G G ++L++FH+ SS M + T V++ C+ + R++ S+
Sbjct: 226 WNTLMAGLVLNGRDLEALQLFHDSRSSITMLTESTYSTVINLCANLKHLGLARQLHSSVL 285
Query: 356 SKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLA 415
K+ ++D +AGQ++ A+ + M + + W +++ C + + LA
Sbjct: 286 -KHGFHSYGNVMTALMDAYNKAGQLDKALDVFLLMSGSQNVVSWTAMIDGCIQNGDIPLA 344
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 91/349 (26%), Positives = 173/349 (49%), Gaps = 21/349 (6%)
Query: 67 DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNN-RIDVARKLFEVM 125
D+ T++V Y V +GR++F+ M K+NV++WT++++GY+ +DV F +
Sbjct: 90 DIRVGTSLVDMYMNWHSVLDGRKVFEGMLKRNVVTWTSLLTGYIQAGVLLDVMSLFFRMR 149
Query: 126 PE---KNEVSWTAMLMGYTQCGRIQDAWELFKAMPMK-----SVVASNSMILGLGQNGEV 177
E N +++++L G + D + A +K +V NS++ + G V
Sbjct: 150 AEGVWPNPFTFSSVLSMVASQGMV-DLGQHVHAQSIKFGCCSTVFVCNSLMNMYAKCGLV 208
Query: 178 QKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVC 237
++ARVVF +M +D +W+ ++ G +LE + LF + + + +V+++C
Sbjct: 209 EEARVVFCRMETRDMVSWNTLMAGLVLNGRDLEALQLFHDSRSSITMLTESTYSTVINLC 268
Query: 238 ASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFA-SKDIVMW 296
A+L L RQ+H+ +++ F V + L+ Y K G+L K +F + S+++V W
Sbjct: 269 ANLKHLGLARQLHSSVLKHGFHSYGNVMTALMDAYNKAGQLDKALDVFLLMSGSQNVVSW 328
Query: 297 NSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVL--SACSYTGKVKEGREIFESM 354
++I G Q G + +F M GV P+D+T +L S S+ ++ + +
Sbjct: 329 TAMIDGCIQNGDIPLAAALFSRMREDGVAPNDLTYSTILTVSEASFPPQIHA-----QVI 383
Query: 355 KSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
K+ Y P T A MV + E+A+ + + M + D + W ++L
Sbjct: 384 KTNYECTP-TVGTALMVS-YSKLCSTEEALSIFK-MIDQKDVVSWSAML 429
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 101/203 (49%), Gaps = 4/203 (1%)
Query: 205 KGYELEVIDLFT-LMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDV-DV 262
+G+ + +D F +++G V +L+ ++ +C S+ G+Q+HA VRC D D+
Sbjct: 32 QGFVHQALDHFLDAHRRQGRCVGGGALLGIIKICGSVPDRVLGKQLHALCVRCGHDHGDI 91
Query: 263 YVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSS 322
V + L+ MY+ ++ G+ +F+ +++V W S+++GY Q G+ + +F M +
Sbjct: 92 RVGTSLVDMYMNWHSVLDGRKVFEGMLKRNVVTWTSLLTGYIQAGVLLDVMSLFFRMRAE 151
Query: 323 GVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVED 382
GV P+ T VLS + G V G+ + + K+ ++++ + G VE+
Sbjct: 152 GVWPNPFTFSSVLSMVASQGMVDLGQHV-HAQSIKFGCCSTVFVCNSLMNMYAKCGLVEE 210
Query: 383 AMKLIEAMPFEPDAIIWGSLLGA 405
A + M D + W +L+
Sbjct: 211 ARVVFCRMETR-DMVSWNTLMAG 232
>gi|357516765|ref|XP_003628671.1| hypothetical protein MTR_8g063290 [Medicago truncatula]
gi|355522693|gb|AET03147.1| hypothetical protein MTR_8g063290 [Medicago truncatula]
Length = 659
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 224/609 (36%), Positives = 342/609 (56%), Gaps = 37/609 (6%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
M +RNVV + M+R YV + +F +M ++ + R +
Sbjct: 79 MSDRNVVFYNVMIRSYVNNHRYDDGLLVFREMVNGGFRPDNYTYPCVLKACSCSENLR-Y 137
Query: 61 DMMPEKDVVA---QTNMVLG------YCQDGRVDEGREIFDEMPKKNVISWTTMISGYVN 111
++ DV+ N+ +G Y + G + E R +FDEM K+V+SW +M++GY +
Sbjct: 138 GLLIHGDVLKVGLDFNLFVGNGLIAMYGKCGCLFEARRVFDEMIWKDVVSWNSMVAGYAH 197
Query: 112 NNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGL 171
N R D A ++ M + G+ D + MP + +S +++
Sbjct: 198 NMRFDDALEICREMEDY---------------GQKPDGCTMASLMPAVANTSSENVLY-- 240
Query: 172 GQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLI 231
V+K +F + K+ +W+ MI+VY + + +DL+ M+K V + +
Sbjct: 241 -----VEK---IFVNLERKNLISWNVMIRVYMKNSLPTQAVDLYLQMEKCRVEPDAITFA 292
Query: 232 SVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASK 291
SVL C L++L GR++H + + + ++ + + LI MY +CG L K +FD +
Sbjct: 293 SVLPACGDLSALLLGRRIHEYVEKKKLCPNLLLENSLIDMYARCGCLDDAKRVFDRMKFR 352
Query: 292 DIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIF 351
D+ W S+IS Y G G ++ +F EM +SG PD + V +LSACS++G + EGR F
Sbjct: 353 DVASWTSLISAYGMTGQGCNAVALFTEMLNSGQAPDSIAFVAILSACSHSGLLDEGRIYF 412
Query: 352 ESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMK 411
+ M Y + P+ EHYAC+VDLLGRAG+V++A +I+ MP EP+ +W +LL +CR
Sbjct: 413 KQMTDDYRITPRIEHYACLVDLLGRAGRVDEAYNIIKQMPIEPNERVWATLLSSCRVFTN 472
Query: 412 LDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIE 471
+D+ +AA LLQL P+ +G Y+LLSNIYA GR+ +V E+R M+++ + K PG S +E
Sbjct: 473 MDIGILAADNLLQLAPEQSGYYVLLSNIYAKAGRWKEVTEIRSVMKRKKIRKTPGISNVE 532
Query: 472 VEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRY 531
+ +VH F D SHP+ I L + ++E GY P++ LHDV+EE+K L
Sbjct: 533 LNNQVHTFLAGD-TSHPQSKEIYEELGVLVAKMKELGYVPETDSALHDVEEEDKEGHLAV 591
Query: 532 HSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKD 591
HSEKLA+ + L+ E IR+ KNLRVCGDCH A KLISK++ REII+RD NRFHHFKD
Sbjct: 592 HSEKLAIVFALLNTQE-YQIRITKNLRVCGDCHIAAKLISKIVEREIIVRDTNRFHHFKD 650
Query: 592 GLCSCRDYW 600
G+CSC DYW
Sbjct: 651 GVCSCGDYW 659
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/318 (28%), Positives = 149/318 (46%), Gaps = 21/318 (6%)
Query: 175 GEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVL 234
GE R VFD+M +++ ++ MI+ Y + + +F M G R + + VL
Sbjct: 67 GEPGLTRKVFDEMSDRNVVFYNVMIRSYVNNHRYDDGLLVFREMVNGGFRPDNYTYPCVL 126
Query: 235 SVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIV 294
C+ +L +G +H +++ D +++V + LI MY KCG L + + +FD KD+V
Sbjct: 127 KACSCSENLRYGLLIHGDVLKVGLDFNLFVGNGLIAMYGKCGCLFEARRVFDEMIWKDVV 186
Query: 295 MWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTG--KVKEGREIFE 352
WNS+++GYA + +L++ EM G PD T+ ++ A + T V +IF
Sbjct: 187 SWNSMVAGYAHNMRFDDALEICREMEDYGQKPDGCTMASLMPAVANTSSENVLYVEKIFV 246
Query: 353 SMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKL 412
+++ K L+ M + L Q D +E EPDAI + S+L AC
Sbjct: 247 NLERKNLISWNVMIRVYMKNSL--PTQAVDLYLQMEKCRVEPDAITFASVLPACG----- 299
Query: 413 DLAEVAAKKLLQ--LEPKNAGPYILLSN----IYASQGRFHDVAELRKNMRKRNVIKPPG 466
DL+ + + + +E K P +LL N +YA G D + M+ R+V
Sbjct: 300 DLSALLLGRRIHEYVEKKKLCPNLLLENSLIDMYARCGCLDDAKRVFDRMKFRDV----- 354
Query: 467 CSWIEVEKKVHMFTGRDC 484
SW + M TG+ C
Sbjct: 355 ASWTSLISAYGM-TGQGC 371
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 72/148 (48%), Gaps = 2/148 (1%)
Query: 268 LITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPD 327
L+ Y CGE + +FD + +++V +N +I Y + L VF EM + G PD
Sbjct: 59 LMRSYAACGEPGLTRKVFDEMSDRNVVFYNVMIRSYVNNHRYDDGLLVFREMVNGGFRPD 118
Query: 328 DVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLI 387
+ T VL ACS + ++ G I + K ++ ++ + G+ G + +A ++
Sbjct: 119 NYTYPCVLKACSCSENLRYGLLIHGDVL-KVGLDFNLFVGNGLIAMYGKCGCLFEARRVF 177
Query: 388 EAMPFEPDAIIWGSLLGACRTHMKLDLA 415
+ M ++ D + W S++ +M+ D A
Sbjct: 178 DEMIWK-DVVSWNSMVAGYAHNMRFDDA 204
>gi|297744236|emb|CBI37206.3| unnamed protein product [Vitis vinifera]
Length = 664
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 212/556 (38%), Positives = 334/556 (60%), Gaps = 60/556 (10%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MPERNVV++ AM+ GYV+ G +++A F +MPE+NVVSWT +L G RI +AR LF
Sbjct: 102 MPERNVVTYNAMLSGYVQCGRLSDACRFFEEMPERNVVSWTSLLCGLANAGRIGEARELF 161
Query: 61 DMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARK 120
++MPE++VV+ +M++G + G+++E R +F+EMP K+ +SW MI+GY ++R++ AR
Sbjct: 162 NVMPERNVVSWNSMLVGLIRSGQLEEARRVFNEMPVKSQVSWNVMIAGYAEHSRMEEARV 221
Query: 121 LFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNG----- 175
LF+ M ++N V+WT+M+ GY + G +Q+ + LF+ MP ++VV+ +MI G NG
Sbjct: 222 LFDGMGDRNVVTWTSMISGYCRAGNVQEGYCLFQKMPERNVVSWTAMIGGFAWNGFYKEA 281
Query: 176 ----------------------EVQKARVVFDQMREKDDATWSGMIKVYERKGY------ 207
+++KA+ +FD + +D +W+ MI Y G
Sbjct: 282 LNSMSYNTQSCNSMINGYIRIGQLEKAQSLFDTIPVRDKISWTSMINGYFNVGQIAKACY 341
Query: 208 -----------------------EL--EVIDLFTLMQKEGVRVNFPSLISVLSVCASLAS 242
EL E LF+ M+ +GV + +L ++A
Sbjct: 342 LFNNMPDRDAVAWTVMVSGHVQNELFAEATYLFSEMRVKGVSPLNSTFSILLGAAGAMAY 401
Query: 243 LDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISG 302
LD GRQ H L++ QF+ D+ + + LI+MY KCGE+ IF S+D++ WNS+I G
Sbjct: 402 LDQGRQFHCLLMKTQFEFDLILQNSLISMYAKCGEIGDAYSIFSKMISRDLISWNSMIMG 461
Query: 303 YAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEP 362
++ +GL ++LKVF M +SG P+ VT +G+LSACS+ G + +G E+F++M + ++P
Sbjct: 462 FSHHGLTSEALKVFEAMLTSGTHPNSVTFLGILSACSHAGLLNQGWELFDAMSDVFAIQP 521
Query: 363 KTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHM-KLDLAEVAAKK 421
+ EHY CMV+LLGRAG+VE+A + I +PFEPD IWG+LLG C M +A AAK+
Sbjct: 522 QLEHYVCMVNLLGRAGKVEEAEEFISKLPFEPDLTIWGALLGVCGFGMINTGVARRAAKR 581
Query: 422 LLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTG 481
LL+L+P NA +++L NI+AS G+ + +LRK M + V K PGCSWI ++ + ++F
Sbjct: 582 LLELDPLNAPAHVVLCNIHASIGQRAEEGQLRKEMGLKGVRKVPGCSWILLKGEPYVFLS 641
Query: 482 RDCVSHPEHPMIMRML 497
D + HP+ ++ +L
Sbjct: 642 GDRI-HPQADEMLSLL 656
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 125/414 (30%), Positives = 217/414 (52%), Gaps = 20/414 (4%)
Query: 1 MPERNV----VSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDA 56
MP R V V WT+++ + + G I EA LF MPE+NVV++ ML G+++ R+ DA
Sbjct: 67 MPNRGVLDRVVCWTSLLSKFSKNGFIDEARALFEIMPERNVVTYNAMLSGYVQCGRLSDA 126
Query: 57 RRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRID 116
R F+ MPE++VV+ T+++ G GR+ E RE+F+ MP++NV+SW +M+ G + + +++
Sbjct: 127 CRFFEEMPERNVVSWTSLLCGLANAGRIGEARELFNVMPERNVVSWNSMLVGLIRSGQLE 186
Query: 117 VARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGE 176
AR++F MP K++VSW M+ GY + R+++A LF M ++VV SMI G + G
Sbjct: 187 EARRVFNEMPVKSQVSWNVMIAGYAEHSRMEEARVLFDGMGDRNVVTWTSMISGYCRAGN 246
Query: 177 VQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSV 236
VQ+ +F +M E++ +W+ MI + G+ E ++ + N S S+++
Sbjct: 247 VQEGYCLFQKMPERNVVSWTAMIGGFAWNGFYKEALN--------SMSYNTQSCNSMING 298
Query: 237 CASLASLDHGRQVHAQL-VRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVM 295
+ L+ + + + VR D + +I Y G++ K +F+N +D V
Sbjct: 299 YIRIGQLEKAQSLFDTIPVR-----DKISWTSMINGYFNVGQIAKACYLFNNMPDRDAVA 353
Query: 296 WNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMK 355
W ++SG+ Q L ++ +F EM GV P + T +L A + +GR+ F +
Sbjct: 354 WTVMVSGHVQNELFAEATYLFSEMRVKGVSPLNSTFSILLGAAGAMAYLDQGRQ-FHCLL 412
Query: 356 SKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTH 409
K E ++ + + G++ DA + M D I W S++ H
Sbjct: 413 MKTQFEFDLILQNSLISMYAKCGEIGDAYSIFSKM-ISRDLISWNSMIMGFSHH 465
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 42/86 (48%), Gaps = 6/86 (6%)
Query: 318 EMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRA 377
EM + GV+ V +LS S G + E R +FE M + +V Y M+ +
Sbjct: 66 EMPNRGVLDRVVCWTSLLSKFSKNGFIDEARALFEIMPERNVVT-----YNAMLSGYVQC 120
Query: 378 GQVEDAMKLIEAMPFEPDAIIWGSLL 403
G++ DA + E MP E + + W SLL
Sbjct: 121 GRLSDACRFFEEMP-ERNVVSWTSLL 145
>gi|28876027|gb|AAO60036.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 704
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 215/580 (37%), Positives = 336/580 (57%), Gaps = 48/580 (8%)
Query: 15 GYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNM 74
Y + G +T A LF ++P +NV+SW ++ GG+I++ + AR+LFD MPE++V M
Sbjct: 151 AYADLGDLTAARELFERIPRRNVMSWNILFGGYIKNGDLGGARKLFDEMPERNVATWNAM 210
Query: 75 VLGYCQDGRVDEGREIF----------DEMPKKNVISWTTMISGYVNNNRID--VARKLF 122
V G G +E F DE +V + V ++ V R
Sbjct: 211 VAGLTNLGFDEESLGFFLDMRREGMHPDEFGLGSVFRCCAGLRDVVTGRQVHAYVVRSGL 270
Query: 123 EVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARV 182
+++ +++ Y +CG +Q+ + + +P S+V+ N++I G QNG+ + A
Sbjct: 271 ----DRDMCVGSSLAHMYMRCGCLQEGEAVLRMLPSLSIVSCNTIIAGRTQNGDSEGA-- 324
Query: 183 VFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLAS 242
++ F +M+ GV + + +S +S C+ LA+
Sbjct: 325 -----------------------------LEYFCMMRSVGVAADVVTFVSAISSCSDLAA 355
Query: 243 LDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISG 302
L G+Q+H Q+++ D V V + L+ MY +CG L + +F + D + +++IS
Sbjct: 356 LAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTFLLSAMISA 415
Query: 303 YAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEP 362
Y +G G+K++++F +M + G P DVT + +L ACS++G +EG + FE M Y ++P
Sbjct: 416 YGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDCFELMTKTYGMQP 475
Query: 363 KTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKL 422
+HY C+VDLLGR+G +++A LI +MP PD +IW +LL AC+T D+AE AK++
Sbjct: 476 SVKHYTCVVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLSACKTQKNFDMAERIAKRV 535
Query: 423 LQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGR 482
++L+P ++ Y+LLSNI A+ R+ DV+E+RK MR NV K PG SW+E++ +H F
Sbjct: 536 IELDPHDSASYVLLSNIRATSRRWGDVSEVRKAMRDNNVRKEPGVSWVELKGHIHQFCTG 595
Query: 483 DCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGL 542
D SHP I LE++ +R+ GY PD S VLHD+++EEK SL +HSEKLA+A+
Sbjct: 596 D-ESHPRQKEIDECLEEMMAKIRQCGYSPDMSMVLHDMEDEEKEVSLSHHSEKLAIAFAF 654
Query: 543 VKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRD 582
+ LPEGVPIRVMKNLRVC DCH AIKL+S+V GREI++RD
Sbjct: 655 LSLPEGVPIRVMKNLRVCDDCHLAIKLMSQVTGREIVVRD 694
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 86/253 (33%), Positives = 140/253 (55%), Gaps = 3/253 (1%)
Query: 136 MLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATW 195
+++ Y G + A ELF+ +P ++V++ N + G +NG++ AR +FD+M E++ ATW
Sbjct: 148 LMLAYADLGDLTAARELFERIPRRNVMSWNILFGGYIKNGDLGGARKLFDEMPERNVATW 207
Query: 196 SGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVR 255
+ M+ G++ E + F M++EG+ + L SV CA L + GRQVHA +VR
Sbjct: 208 NAMVAGLTNLGFDEESLGFFLDMRREGMHPDEFGLGSVFRCCAGLRDVVTGRQVHAYVVR 267
Query: 256 CQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKV 315
D D+ V S L MY++CG L +G+ + S IV N+II+G Q G E +L+
Sbjct: 268 SGLDRDMCVGSSLAHMYMRCGCLQEGEAVLRMLPSLSIVSCNTIIAGRTQNGDSEGALEY 327
Query: 316 FHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIF-ESMKSKYLVEPKTEHYACMVDLL 374
F M S GV D VT V +S+CS + +G++I + MK+ V+ C+V +
Sbjct: 328 FCMMRSVGVAADVVTFVSAISSCSDLAALAQGQQIHGQVMKAG--VDKVVPVMTCLVHMY 385
Query: 375 GRAGQVEDAMKLI 387
R G + D+ ++
Sbjct: 386 SRCGCLGDSERVF 398
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 114/302 (37%), Gaps = 82/302 (27%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
+P RNV+SW + GY++ G + A LF +MPE+NV +W M+ G +++ F
Sbjct: 168 IPRRNVMSWNILFGGYIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFF 227
Query: 61 -DMMPE-------------------KDVVA-------------QTNMVLG------YCQD 81
DM E +DVV +M +G Y +
Sbjct: 228 LDMRREGMHPDEFGLGSVFRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRC 287
Query: 82 GRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVM---------------- 125
G + EG + +P +++S T+I+G N + A + F +M
Sbjct: 288 GCLQEGEAVLRMLPSLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAI 347
Query: 126 ---------PEKNEVSWTAMLMG--------------YTQCGRIQDAWELFKAMPMKSVV 162
+ ++ M G Y++CG + D+ +F
Sbjct: 348 SSCSDLAALAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTF 407
Query: 163 ASNSMILGLGQNGEVQKARVVFDQM----REKDDATWSGMIKVYERKGYELEVIDLFTLM 218
++MI G +G QKA +F QM E D T+ ++ G + E +D F LM
Sbjct: 408 LLSAMISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDCFELM 467
Query: 219 QK 220
K
Sbjct: 468 TK 469
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 40/194 (20%), Positives = 71/194 (36%), Gaps = 43/194 (22%)
Query: 233 VLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKD 292
+ C +L L RQ+HA D + A+ L+ Y G+L + +F+ ++
Sbjct: 116 LFRACRALRPL---RQLHAFAATSGAATDRFTANHLMLAYADLGDLTAARELFERIPRRN 172
Query: 293 IVMWNSIISGY-------------------------------AQYGLGEKSLKVFHEMFS 321
++ WN + GY G E+SL F +M
Sbjct: 173 VMSWNILFGGYIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLDMRR 232
Query: 322 SGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLG----RA 377
G+ PD+ L V C+ V GR++ Y+V + C+ L R
Sbjct: 233 EGMHPDEFGLGSVFRCCAGLRDVVTGRQVH-----AYVVRSGLDRDMCVGSSLAHMYMRC 287
Query: 378 GQVEDAMKLIEAMP 391
G +++ ++ +P
Sbjct: 288 GCLQEGEAVLRMLP 301
>gi|145332693|ref|NP_001078212.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274431|sp|Q9LW32.1|PP258_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g26782, mitochondrial; Flags: Precursor
gi|9279668|dbj|BAB01225.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332643694|gb|AEE77215.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 659
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 237/644 (36%), Positives = 350/644 (54%), Gaps = 72/644 (11%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMP 64
+V SW +++ G EA F M + +S F I LFD+
Sbjct: 40 DVFSWNSVIADLARSGDSAEALLAFSSMRK---LSLYPTRSSF--PCAIKACSSLFDIFS 94
Query: 65 EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEV 124
K Q V GY D + + +I Y +++ ARK+F+
Sbjct: 95 GKQT-HQQAFVFGYQSD-----------------IFVSSALIVMYSTCGKLEDARKVFDE 136
Query: 125 MPEKNEVSWTAMLMGYTQCGRIQDAWELFK----------------AMPMKSVVAS---- 164
+P++N VSWT+M+ GY G DA LFK +M + SV+++
Sbjct: 137 IPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRV 196
Query: 165 -------------------------NSMILGLGQNGE--VQKARVVFDQMREKDDATWSG 197
N+++ + GE V AR +FDQ+ +KD +++
Sbjct: 197 PAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNS 256
Query: 198 MIKVYERKGYELEVIDLFT-LMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRC 256
++ VY + G E ++F L++ + V N +L +VL + +L G+ +H Q++R
Sbjct: 257 IMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRM 316
Query: 257 QFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVF 316
+ DV V + +I MY KCG + + FD +K++ W ++I+GY +G K+L++F
Sbjct: 317 GLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELF 376
Query: 317 HEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGR 376
M SGV P+ +T V VL+ACS+ G EG F +MK ++ VEP EHY CMVDLLGR
Sbjct: 377 PAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGR 436
Query: 377 AGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILL 436
AG ++ A LI+ M +PD+IIW SLL ACR H ++LAE++ +L +L+ N G Y+LL
Sbjct: 437 AGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLL 496
Query: 437 SNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRM 496
S+IYA GR+ DV +R M+ R ++KPPG S +E+ +VH+F D HP+ I
Sbjct: 497 SHIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGD-EEHPQREKIYEF 555
Query: 497 LEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKN 556
L ++ L EAGY ++S V HDVDEEEK +LR HSEKLA+A+G++ G + V+KN
Sbjct: 556 LAELNRKLLEAGYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKN 615
Query: 557 LRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
LRVC DCH+ IKLISK++ RE ++RDA RFHHFKDG CSC DYW
Sbjct: 616 LRVCSDCHNVIKLISKIVDREFVVRDAKRFHHFKDGGCSCGDYW 659
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 124/294 (42%), Gaps = 87/294 (29%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLF----------------------------WQM 32
+P+RN+VSWT+M+RGY G +A +LF ++
Sbjct: 137 IPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRV 196
Query: 33 PEKNV---VSWTVMLGGFIRDSRIDD----------------ARRLFDMMPEKDVVAQTN 73
P K + + V+ GF R + + AR++FD + +KD V+ +
Sbjct: 197 PAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNS 256
Query: 74 MVLGYCQDGRVDEGREIFDEMPKK-----NVISWTTMISGYVNNNRIDVAR----KLFEV 124
++ Y Q G +E E+F + K N I+ +T++ ++ + + + ++ +
Sbjct: 257 IMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRM 316
Query: 125 MPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVF 184
E + + T+++ Y +CGR++ A + F M K+V + +MI G G +G KA
Sbjct: 317 GLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKA---- 372
Query: 185 DQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCA 238
++LF M GVR N+ + +SVL+ C+
Sbjct: 373 ---------------------------LELFPAMIDSGVRPNYITFVSVLAACS 399
>gi|79475105|ref|NP_193221.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122236284|sp|Q0WSH6.1|PP312_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g14850; AltName: Full=Protein LOVASTATIN INSENSITIVE
1
gi|110735893|dbj|BAE99922.1| hypothetical protein [Arabidopsis thaliana]
gi|332658109|gb|AEE83509.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 684
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 223/618 (36%), Positives = 348/618 (56%), Gaps = 21/618 (3%)
Query: 2 PERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIR---DSRIDDARR 58
P RNVVSWT+++ G + G + A F++M + VV + R+ +
Sbjct: 69 PARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGK 128
Query: 59 LFDMMPEK-----DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNN 113
+ K DV + YC+ D+ R++FDE+P++N+ +W IS V +
Sbjct: 129 QIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDG 188
Query: 114 RIDVARKLF----EVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKS-----VVAS 164
R A + F + N +++ A L + + +L + ++S V
Sbjct: 189 RPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQL-HGLVLRSGFDTDVSVC 247
Query: 165 NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVR 224
N +I G+ +++ + ++F +M K+ +W ++ Y + + + L+ +K+ V
Sbjct: 248 NGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVE 307
Query: 225 VNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLI 284
+ + SVLS CA +A L+ GR +HA V+ + ++V S L+ MY KCG + +
Sbjct: 308 TSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQA 367
Query: 285 FDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGV--MPDDVTLVGVLSACSYTG 342
FD K++V NS+I GYA G + +L +F EM G P+ +T V +LSACS G
Sbjct: 368 FDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAG 427
Query: 343 KVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSL 402
V+ G +IF+SM+S Y +EP EHY+C+VD+LGRAG VE A + I+ MP +P +WG+L
Sbjct: 428 AVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGAL 487
Query: 403 LGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVI 462
ACR H K L +AA+ L +L+PK++G ++LLSN +A+ GR+ + +R+ ++ +
Sbjct: 488 QNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIK 547
Query: 463 KPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDE 522
K G SWI V+ +VH F +D SH + I L K+ + AGY PD L+D++E
Sbjct: 548 KGAGYSWITVKNQVHAFQAKD-RSHILNKEIQTTLAKLRNEMEAAGYKPDLKLSLYDLEE 606
Query: 523 EEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRD 582
EEK + +HSEKLA+A+GL+ LP VPIR+ KNLR+CGDCHS K +S + REII+RD
Sbjct: 607 EEKAAEVSHHSEKLALAFGLLSLPLSVPIRITKNLRICGDCHSFFKFVSGSVKREIIVRD 666
Query: 583 ANRFHHFKDGLCSCRDYW 600
NRFH FKDG+CSC+DYW
Sbjct: 667 NNRFHRFKDGICSCKDYW 684
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 130/312 (41%), Gaps = 44/312 (14%)
Query: 97 KNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAM 156
KN IS ++M G V + RI K + P ++ ++ Y++ + A + +
Sbjct: 14 KNAISASSMRLGRVVHARI---VKTLDSPPPPFLANY--LINMYSKLDHPESARLVLRLT 68
Query: 157 PMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFT 216
P ++VV+ S+I GL QNG A V F +MR
Sbjct: 69 PARNVVSWTSLISGLAQNGHFSTALVEFFEMR---------------------------- 100
Query: 217 LMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCG 276
+EGV N + ASL G+Q+HA V+C +DV+V MY K
Sbjct: 101 ---REGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTR 157
Query: 277 ELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLS 336
+ +FD +++ WN+ IS G ++++ F E P+ +T L+
Sbjct: 158 LRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLN 217
Query: 337 ACSYTGKVKEGREIFE-SMKSKYLVEPKTEHYAC--MVDLLGRAGQVEDAMKLIEAMPFE 393
ACS + G ++ ++S + T+ C ++D G+ Q+ + + M +
Sbjct: 218 ACSDWLHLNLGMQLHGLVLRSGF----DTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTK 273
Query: 394 PDAIIWGSLLGA 405
+A+ W SL+ A
Sbjct: 274 -NAVSWCSLVAA 284
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 124/268 (46%), Gaps = 20/268 (7%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM----PEKNVVSWTVMLGGFIRDSRIDDA 56
+PERN+ +W A + V +G EA F + N +++ L ++
Sbjct: 169 IPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLG 228
Query: 57 RRLFDMMP----EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+L ++ + DV ++ Y + ++ IF EM KN +SW ++++ YV N
Sbjct: 229 MQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQN 288
Query: 113 NRIDVARKLF----EVMPEKNEVSWTAML-----MGYTQCGRIQDAWELFKAMPMKSVVA 163
+ + A L+ + + E ++ +++L M + GR A + KA +++
Sbjct: 289 HEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAV-KACVERTIFV 347
Query: 164 SNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGV 223
++++ G+ G ++ + FD+M EK+ T + +I Y +G + LF M G
Sbjct: 348 GSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGC 407
Query: 224 --RVNFPSLISVLSVCASLASLDHGRQV 249
N+ + +S+LS C+ ++++G ++
Sbjct: 408 GPTPNYMTFVSLLSACSRAGAVENGMKI 435
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 86/170 (50%), Gaps = 14/170 (8%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRD----SRIDDA 56
M +N VSW ++V YV+ +A L+ + + V + M+ + + ++
Sbjct: 270 MGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELG 329
Query: 57 RRL----FDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
R + E+ + + +V Y + G +++ + FDEMP+KN+++ ++I GY +
Sbjct: 330 RSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQ 389
Query: 113 NRIDVARKLFEVM------PEKNEVSWTAMLMGYTQCGRIQDAWELFKAM 156
++D+A LFE M P N +++ ++L ++ G +++ ++F +M
Sbjct: 390 GQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSM 439
>gi|297734119|emb|CBI15366.3| unnamed protein product [Vitis vinifera]
Length = 783
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 222/621 (35%), Positives = 354/621 (57%), Gaps = 25/621 (4%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM-------PEKNVVSWTVMLGGFIRDSRI 53
+ +N+ W A+V Y + +A ++F ++ P+ + + + D +
Sbjct: 167 LRRKNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGL 226
Query: 54 DDARRLFDMMPEKDVVAQ----TNMVLGYCQDGRVDEG-REIFDEMPKKNVISWTTMISG 108
+ + M + D+V+ ++ Y + G V+E + +FD M K V SW ++ G
Sbjct: 227 --GQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKRVFDLMDTKTVSSWNALLCG 284
Query: 109 YVNNNRIDVARKLFEVMPEKN-EVSWTAMLMGYTQCGRIQDAW--ELFKAMPMKSVVASN 165
Y N+ A L+ M + + W + C R++ E +++ +A +
Sbjct: 285 YAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVD 344
Query: 166 SMILGLGQ------NGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQ 219
I G+ G+ A+V+FD M + +W+ MI Y + G E I+LF M
Sbjct: 345 PFI-GISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQML 403
Query: 220 KEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELV 279
+G++ +++ V C+ L++L G+++H ++ D++V+S +I MY K G +
Sbjct: 404 SDGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIG 463
Query: 280 KGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACS 339
+ IFD KD+ WN II+GY +G G+++L++F +M G+ PDD T G+L ACS
Sbjct: 464 LSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACS 523
Query: 340 YTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIW 399
+ G V++G E F M + + +EPK EHY C+VD+LGRAG+++DA++LIE MP +PD+ IW
Sbjct: 524 HAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDPDSRIW 583
Query: 400 GSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKR 459
SLL +CR H L L E A KLL+LEP+ Y+L+SN++A G++ DV +R M+
Sbjct: 584 SSLLSSCRIHGNLGLGEKVANKLLELEPEKPENYVLISNLFAGSGKWDDVRRVRGRMKDI 643
Query: 460 NVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHD 519
+ K GCSWIEV KVH F D + PE + ++ + GY PD+ VLHD
Sbjct: 644 GLQKDAGCSWIEVGGKVHNFLIGDEML-PELEEVRETWRRLEVKISSIGYTPDTGSVLHD 702
Query: 520 VDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREII 579
++EE+K+ LR HSEKLA+++GL+ +G+P+RV KNLR+CGDCH+A K ISKV+ R+I+
Sbjct: 703 LEEEDKIGILRGHSEKLAISFGLLNTAKGLPVRVYKNLRICGDCHNAAKFISKVVNRDIV 762
Query: 580 LRDANRFHHFKDGLCSCRDYW 600
+RD RFHHF+DG+CSC DYW
Sbjct: 763 VRDNKRFHHFRDGICSCGDYW 783
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 95/391 (24%), Positives = 188/391 (48%), Gaps = 17/391 (4%)
Query: 53 IDDARRLFDMMPE-----KDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMIS 107
I+ RRL +M+ D V T ++ Y G + R +FD++ +KN+ W ++S
Sbjct: 121 IEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRKNLFQWNAIVS 180
Query: 108 GYVNNNRIDVARKLFEVMPEKNEVSWTAMLM--------GYTQCGRIQDAWELFKAMPMK 159
Y N + A +F + E + G G Q + M +
Sbjct: 181 AYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQIIHGMATKMDLV 240
Query: 160 S-VVASNSMILGLGQNGEVQKA-RVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTL 217
S V N++I G+ G V++A + VFD M K ++W+ ++ Y + + +DL+
Sbjct: 241 SDVFVGNALIAMYGKCGLVEEAVKRVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQ 300
Query: 218 MQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGE 277
M G+ ++ ++ S+L C+ + SL +G ++H +R VD ++ L+++YI CG+
Sbjct: 301 MTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGK 360
Query: 278 LVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSA 337
+++FD + +V WN +I+GY+Q GL ++++ +F +M S G+ P ++ ++ V A
Sbjct: 361 PFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGA 420
Query: 338 CSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAI 397
CS ++ G+E+ +L E + ++D+ + G + + ++ + + E D
Sbjct: 421 CSQLSALRLGKELHCFALKAHLTE-DIFVSSSIIDMYAKGGCIGLSQRIFDRLR-EKDVA 478
Query: 398 IWGSLLGACRTHMKLDLAEVAAKKLLQLEPK 428
W ++ H + A +K+L+L K
Sbjct: 479 SWNVIIAGYGIHGRGKEALELFEKMLRLGLK 509
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 85/173 (49%), Gaps = 3/173 (1%)
Query: 233 VLSVCASLASLDHGRQVHAQL-VRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASK 291
+L C ++ GR++H + QF D + + +ITMY CG +++FD K
Sbjct: 111 LLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRK 170
Query: 292 DIVMWNSIISGYAQYGLGEKSLKVFHEMFS-SGVMPDDVTLVGVLSACSYTGKVKEGREI 350
++ WN+I+S Y + L E ++ +F E+ S + PD+ TL V+ AC+ + G +I
Sbjct: 171 NLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLG-QI 229
Query: 351 FESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
M +K + ++ + G+ G VE+A+K + + W +LL
Sbjct: 230 IHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKRVFDLMDTKTVSSWNALL 282
>gi|357151953|ref|XP_003575959.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14850-like [Brachypodium distachyon]
Length = 689
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 213/550 (38%), Positives = 329/550 (59%), Gaps = 11/550 (2%)
Query: 60 FDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNR-IDVA 118
F +P V+ M + Y + G + R +F+EMP +NVI+W +++ V + R ++
Sbjct: 142 FGYLPGDPFVSCAAMDM-YFKTGCLGLARRLFEEMPNRNVIAWNAVMTNAVIDGRPLETF 200
Query: 119 RKLFEVMPEKNEVSWTAMLMGYTQCG--RIQDAWELFKAMPMK-----SVVASNSMILGL 171
+ F + + ++ + C E F + V SN+M+
Sbjct: 201 KAYFGLREAGGMPNVVSVCAFFNACAGAMFLSLGEQFHGFVVTCGFDMDVSVSNAMVDFY 260
Query: 172 GQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLI 231
G+ KAR VFD MR ++ +W MI Y + G E + + ++ + G +
Sbjct: 261 GKCRCAGKARAVFDGMRVRNSVSWCSMIVAYAQHGAEEDALAVYMGARNTGEEPTDFMVS 320
Query: 232 SVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASK 291
SVL+ CA L L+ GR +HA VR D +++VAS L+ MY KCG + + +F + +
Sbjct: 321 SVLTTCAGLLGLNFGRALHAVAVRSCIDANIFVASALVDMYGKCGGVEDAEQVFLDMPER 380
Query: 292 DIVMWNSIISGYAQYGLGEKSLKVFHEMF-SSGVMPDDVTLVGVLSACSYTGKVKEGREI 350
++V WN++I GYA G + +L VF M S G P+ +TLV V++ACS G K+G E+
Sbjct: 381 NLVTWNAMIGGYAHIGDAQNALAVFDAMIRSGGTSPNHITLVNVITACSRGGLTKDGYEL 440
Query: 351 FESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHM 410
F++M+ ++ VEP+TEHYAC+VDLLGRAG E A ++I+ MP P +WG+LLGAC+ H
Sbjct: 441 FDTMRERFGVEPRTEHYACVVDLLGRAGMEERAYEIIQRMPMRPSISVWGALLGACKMHG 500
Query: 411 KLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWI 470
K +L +A++KL +L+P+++G ++LLSN+ AS GR+ + ++RK M+ + K PGCSWI
Sbjct: 501 KTELGRIASEKLFELDPQDSGNHVLLSNMLASAGRWAEATDVRKEMKNVGIKKEPGCSWI 560
Query: 471 EVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLR 530
+ VH+F +D H + I +L K+ ++ +GY PD+ + L+DV+EEEK +
Sbjct: 561 TWKNVVHVFYAKD-TKHDRNSEIQALLAKLKKQMQASGYMPDTQYSLYDVEEEEKETEVF 619
Query: 531 YHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFK 590
HSEKLA+A+GL+ +P VPIR+ KNLR+C DCH A K +S ++GREII+RD NRFH+FK
Sbjct: 620 QHSEKLALAFGLIHIPPSVPIRITKNLRICVDCHRAFKFVSGIVGREIIVRDNNRFHYFK 679
Query: 591 DGLCSCRDYW 600
CSC+DYW
Sbjct: 680 QFECSCKDYW 689
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 104/277 (37%), Gaps = 60/277 (21%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEK----NVVSWTVMLGGFIRDSRIDDA 56
MP RNV++W A++ V +G E ++ + E NVVS +
Sbjct: 175 MPNRNVIAWNAVMTNAVIDGRPLETFKAYFGLREAGGMPNVVSVCAFFNACAGAMFLSLG 234
Query: 57 RRL--------FDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISG 108
+ FDM DV MV Y + + R +FD M +N +SW +MI
Sbjct: 235 EQFHGFVVTCGFDM----DVSVSNAMVDFYGKCRCAGKARAVFDGMRVRNSVSWCSMIVA 290
Query: 109 YVNNNR-----------------------------------IDVARKLFEVMP----EKN 129
Y + ++ R L V + N
Sbjct: 291 YAQHGAEEDALAVYMGARNTGEEPTDFMVSSVLTTCAGLLGLNFGRALHAVAVRSCIDAN 350
Query: 130 EVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQM-- 187
+A++ Y +CG ++DA ++F MP +++V N+MI G G+ Q A VFD M
Sbjct: 351 IFVASALVDMYGKCGGVEDAEQVFLDMPERNLVTWNAMIGGYAHIGDAQNALAVFDAMIR 410
Query: 188 ---REKDDATWSGMIKVYERKGYELEVIDLFTLMQKE 221
+ T +I R G + +LF M++
Sbjct: 411 SGGTSPNHITLVNVITACSRGGLTKDGYELFDTMRER 447
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 87/195 (44%), Gaps = 32/195 (16%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDM 62
+ N+ +A+V Y + G + +A +F MPE+N+V+W M+GG+ +A +FD
Sbjct: 348 DANIFVASALVDMYGKCGGVEDAEQVFLDMPERNLVTWNAMIGGYAHIGDAQNALAVFDA 407
Query: 63 M-----PEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDV 117
M + + N++ + G +G E+FD M
Sbjct: 408 MIRSGGTSPNHITLVNVITACSRGGLTKDGYELFDTM----------------------- 444
Query: 118 ARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQ-NGE 176
R+ F V P + L+G + G + A+E+ + MPM+ ++ +LG + +G+
Sbjct: 445 -RERFGVEPRTEHYACVVDLLG--RAGMEERAYEIIQRMPMRPSISVWGALLGACKMHGK 501
Query: 177 VQKARVVFDQMREKD 191
+ R+ +++ E D
Sbjct: 502 TELGRIASEKLFELD 516
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/220 (21%), Positives = 94/220 (42%), Gaps = 7/220 (3%)
Query: 194 TWSGMIKVYERKGYELEVIDLFTLMQKEGVRVN---FPSLISVLSVCASLASLDHGRQVH 250
+++ I + L + F M + G+R N FPS + CA G Q+H
Sbjct: 78 SFTAFISGAAQHARPLAALSAFAAMLRVGLRPNDFTFPSAFKA-AACAPPRCSTVGPQIH 136
Query: 251 AQLVRCQF-DVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLG 309
A +R + D +V+ + MY K G L + +F+ +++++ WN++++ G
Sbjct: 137 ALALRFGYLPGDPFVSCAAMDMYFKTGCLGLARRLFEEMPNRNVIAWNAVMTNAVIDGRP 196
Query: 310 EKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYAC 369
++ K + + +G MP+ V++ +AC+ + G E F +
Sbjct: 197 LETFKAYFGLREAGGMPNVVSVCAFFNACAGAMFLSLG-EQFHGFVVTCGFDMDVSVSNA 255
Query: 370 MVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTH 409
MVD G+ A + + M +++ W S++ A H
Sbjct: 256 MVDFYGKCRCAGKARAVFDGMRVR-NSVSWCSMIVAYAQH 294
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 76/176 (43%), Gaps = 26/176 (14%)
Query: 1 MPERNVVSWTAMVRGYVEEG-----------MITEAGTLFWQMPEKNVVSWTVMLGGFIR 49
MPERN+V+W AM+ GY G MI GT + NV++ GG +
Sbjct: 377 MPERNLVTWNAMIGGYAHIGDAQNALAVFDAMIRSGGTSPNHITLVNVIT-ACSRGGLTK 435
Query: 50 DSR--IDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVIS-WTTMI 106
D D R F + P + A +LG + G + EI MP + IS W ++
Sbjct: 436 DGYELFDTMRERFGVEPRTEHYACVVDLLG--RAGMEERAYEIIQRMPMRPSISVWGALL 493
Query: 107 SGYVNNNRIDVAR----KLFEVMPEK--NEVSWTAMLMGYTQCGRIQDAWELFKAM 156
+ + ++ R KLFE+ P+ N V + ML GR +A ++ K M
Sbjct: 494 GACKMHGKTELGRIASEKLFELDPQDSGNHVLLSNML---ASAGRWAEATDVRKEM 546
>gi|356575510|ref|XP_003555883.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Glycine max]
Length = 618
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 218/549 (39%), Positives = 331/549 (60%), Gaps = 18/549 (3%)
Query: 65 EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEV 124
E D++ ++ Y + VD R+ F+EMP K+++SW T+I N A KL
Sbjct: 75 EMDILTSNMLINMYSKCSLVDSARKKFNEMPVKSLVSWNTVIGALTQNAEDREALKLLIQ 134
Query: 125 MPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASN-----SMILGLGQNG 175
M + NE + +++L I + +L A +K+ + SN +++ +
Sbjct: 135 MQREGTPFNEFTISSVLCNCAFKCAILECMQL-HAFSIKAAIDSNCFVGTALLHVYAKCS 193
Query: 176 EVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLS 235
++ A +F+ M EK+ TWS M+ Y + G+ E + +F Q G + + S +S
Sbjct: 194 SIKDASQMFESMPEKNAVTWSSMMAGYVQNGFHEEALLIFRNAQLMGFDQDPFMISSAVS 253
Query: 236 VCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDN-FASKDIV 294
CA LA+L G+QVHA + F ++YV+S LI MY KCG + + L+F + IV
Sbjct: 254 ACAGLATLIEGKQVHAISHKSGFGSNIYVSSSLIDMYAKCGCIREAYLVFQGVLEVRSIV 313
Query: 295 MWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESM 354
+WN++ISG+A++ +++ +F +M G PDDVT V VL+ACS+ G +EG++ F+ M
Sbjct: 314 LWNAMISGFARHARAPEAMILFEKMQQRGFFPDDVTYVCVLNACSHMGLHEEGQKYFDLM 373
Query: 355 KSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDL 414
++ + P HY+CM+D+LGRAG V A LIE MPF + +WGSLL +C+ + ++
Sbjct: 374 VRQHNLSPSVLHYSCMIDILGRAGLVHKAYDLIERMPFNATSSMWGSLLASCKIYGNIEF 433
Query: 415 AEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEK 474
AE+AAK L ++EP NAG +ILL+NIYA+ ++ +VA RK +R+ +V K G SWIE++
Sbjct: 434 AEIAAKYLFEMEPNNAGNHILLANIYAANKKWDEVARARKLLRETDVRKERGTSWIEIKN 493
Query: 475 KVHMFTGRDCVSHPEHPMIMRMLEKIGGL---LREAGYCPDSSFVLHDVDEEEKVHSLRY 531
K+H FT V HP I + K+ L L++ Y D+S LHDV+E K LR+
Sbjct: 494 KIHSFT----VGERNHPQIDDIYAKLDNLVVELKKLNYKVDTSNDLHDVEENRKQMLLRH 549
Query: 532 HSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKD 591
HSEKLA+ +GL+ LP +PIR++KNLR+CGDCH+ +KL+SK REII+RD NRFHHFKD
Sbjct: 550 HSEKLAITFGLMCLPRDIPIRIIKNLRICGDCHTFMKLVSKSTSREIIVRDTNRFHHFKD 609
Query: 592 GLCSCRDYW 600
G CSC ++W
Sbjct: 610 GFCSCGEFW 618
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 87/172 (50%), Gaps = 2/172 (1%)
Query: 233 VLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKD 292
+L +CA S GR HAQ++R ++D+ +++LI MY KC + + F+ K
Sbjct: 49 LLQLCAKTRSSMGGRACHAQIIRIGLEMDILTSNMLINMYSKCSLVDSARKKFNEMPVKS 108
Query: 293 IVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFE 352
+V WN++I Q ++LK+ +M G ++ T+ VL C++ + E ++
Sbjct: 109 LVSWNTVIGALTQNAEDREALKLLIQMQREGTPFNEFTISSVLCNCAFKCAILECMQL-H 167
Query: 353 SMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLG 404
+ K ++ ++ + + ++DA ++ E+MP E +A+ W S++
Sbjct: 168 AFSIKAAIDSNCFVGTALLHVYAKCSSIKDASQMFESMP-EKNAVTWSSMMA 218
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 108/228 (47%), Gaps = 36/228 (15%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFD- 61
+ N TA++ Y + I +A +F MPEKN V+W+ M+ G++++ ++A +F
Sbjct: 176 DSNCFVGTALLHVYAKCSSIKDASQMFESMPEKNAVTWSSMMAGYVQNGFHEEALLIFRN 235
Query: 62 ---MMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVA 118
M ++D ++ V + EG+++ K SG+ +N I V+
Sbjct: 236 AQLMGFDQDPFMISSAVSACAGLATLIEGKQVHAISHK----------SGFGSN--IYVS 283
Query: 119 RKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKA-MPMKSVVASNSMILGLGQNGEV 177
L ++ Y +CG I++A+ +F+ + ++S+V N+MI G ++
Sbjct: 284 SSLIDM---------------YAKCGCIREAYLVFQGVLEVRSIVLWNAMISGFARHARA 328
Query: 178 QKARVVFDQMREK----DDATWSGMIKVYERKGYELEVIDLFTLMQKE 221
+A ++F++M+++ DD T+ ++ G E F LM ++
Sbjct: 329 PEAMILFEKMQQRGFFPDDVTYVCVLNACSHMGLHEEGQKYFDLMVRQ 376
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 96/210 (45%), Gaps = 28/210 (13%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MPE+N V+W++M+ GYV+ G EA +F +N F+ S + L
Sbjct: 205 MPEKNAVTWSSMMAGYVQNGFHEEALLIF-----RNAQLMGFDQDPFMISSAVSACAGLA 259
Query: 61 DMMPEKDVVA-------------QTNMVLGYCQDGRVDEGREIFDE-MPKKNVISWTTMI 106
++ K V A ++++ Y + G + E +F + ++++ W MI
Sbjct: 260 TLIEGKQVHAISHKSGFGSNIYVSSSLIDMYAKCGCIREAYLVFQGVLEVRSIVLWNAMI 319
Query: 107 SGYVNNNRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAMPMK--- 159
SG+ + R A LFE M ++ ++V++ +L + G ++ + F M +
Sbjct: 320 SGFARHARAPEAMILFEKMQQRGFFPDDVTYVCVLNACSHMGLHEEGQKYFDLMVRQHNL 379
Query: 160 --SVVASNSMILGLGQNGEVQKARVVFDQM 187
SV+ + MI LG+ G V KA + ++M
Sbjct: 380 SPSVLHYSCMIDILGRAGLVHKAYDLIERM 409
>gi|242076234|ref|XP_002448053.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
gi|241939236|gb|EES12381.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
Length = 693
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 230/624 (36%), Positives = 363/624 (58%), Gaps = 34/624 (5%)
Query: 2 PERNVVSWTAMVRGYVEEGMITEAGTLFWQM-------PEKNVVSWTVMLGGFIRDSRID 54
P + + ++R + G +A LF +M P+++ V+ L R +D
Sbjct: 79 PPLSTPCYNVLMRALLHAGHPEDALHLFVEMLDVASVCPDQHTVA--CALKSCSRMCTLD 136
Query: 55 DARRL------FDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISG 108
R + +M ++ V++ + C+D V + +FD + + V+ W +I+
Sbjct: 137 VGRGIQAYAVKRGLMADRFVLSSLIHMYASCRD--VAAAQLLFDAVEENGVVMWNAIITA 194
Query: 109 YVNNNR----IDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDA----WELFKAMPMKS 160
Y+ N +++ + + EV +E++ +++ T CGRI DA W + + + K
Sbjct: 195 YMKNGNWMEVVEMFKGMLEVGVAFDEITLVSVV---TACGRIGDAKLGKW-VAEYVDEKG 250
Query: 161 VVASNSMILGL----GQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFT 216
+V + +++ L + GE+ KAR +FD M+ +D WS MI Y + E + LF+
Sbjct: 251 LVRNRNLMTALIDMYAKCGELGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALALFS 310
Query: 217 LMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCG 276
MQ V N +++SVLS CA L +L+ G+ VH+ + R + + + + + L+ Y KCG
Sbjct: 311 EMQLAEVEPNDVTMVSVLSACAVLGALETGKWVHSYIRRKRLSLTIILGTALVDFYAKCG 370
Query: 277 ELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLS 336
+ F++ K+ W ++I G A G G ++L++F M + + P DVT +GVL
Sbjct: 371 CIDDAVEAFESMPVKNSWTWTALIKGMATNGRGREALELFSSMRKASIEPTDVTFIGVLM 430
Query: 337 ACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDA 396
ACS++ V+EGR F+SM Y ++P+ EHY C+VDLLGRAG +++A + I MP EP+A
Sbjct: 431 ACSHSCLVEEGRRHFDSMTQDYGIKPRAEHYGCVVDLLGRAGLIDEAYQFIRTMPIEPNA 490
Query: 397 IIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNM 456
+IW +LL +C H +++ E A K+++ L P ++G YILLSNIYAS G++ + A +RK M
Sbjct: 491 VIWRALLSSCAVHKNVEIGEEALKQIVSLNPSHSGDYILLSNIYASVGQWKNAAMIRKEM 550
Query: 457 RKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFV 516
+ R + K PGCS IE++ V F D HP+ I + +E++ ++ AGY P+++ V
Sbjct: 551 KDRGIEKTPGCSLIELDGVVVEFFAEDS-DHPQLKEIYQKVEEMIDRIKMAGYIPNTADV 609
Query: 517 LHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGR 576
+VDE EK S+ +HSEKLA+A+GL+KL G IR+ KNLRVC DCHSA KLISKV R
Sbjct: 610 RLEVDEHEKEVSVSHHSEKLAIAFGLMKLDPGATIRLSKNLRVCTDCHSATKLISKVYNR 669
Query: 577 EIILRDANRFHHFKDGLCSCRDYW 600
EI++RD NRFHHFKDG CSC DYW
Sbjct: 670 EIVVRDRNRFHHFKDGTCSCNDYW 693
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 94/217 (43%), Gaps = 18/217 (8%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMP----EKNVVSWTVMLGGFIRDSRIDDA 56
M R+VV+W+AM+ GY + EA LF +M E N V+ +L ++
Sbjct: 281 MQSRDVVAWSAMISGYTQADQCREALALFSEMQLAEVEPNDVTMVSVLSACAVLGALETG 340
Query: 57 RRLFDMMPEK----DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+ + + K ++ T +V Y + G +D+ E F+ MP KN +WT +I G N
Sbjct: 341 KWVHSYIRRKRLSLTIILGTALVDFYAKCGCIDDAVEAFESMPVKNSWTWTALIKGMATN 400
Query: 113 NRIDVARKLFEVMP----EKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMI 168
R A +LF M E +V++ +LM + +++ F +M + +
Sbjct: 401 GRGREALELFSSMRKASIEPTDVTFIGVLMACSHSCLVEEGRRHFDSMTQDYGIKPRAEH 460
Query: 169 LG-----LGQNGEVQKARVVFDQMR-EKDDATWSGMI 199
G LG+ G + +A M E + W ++
Sbjct: 461 YGCVVDLLGRAGLIDEAYQFIRTMPIEPNAVIWRALL 497
>gi|145333528|ref|NP_001078414.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635630|sp|A8MQA3.2|PP330_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21065
gi|332658994|gb|AEE84394.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 595
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 213/526 (40%), Positives = 326/526 (61%), Gaps = 14/526 (2%)
Query: 87 GREIFDEMPKK-NVISWTTMISGYVNNNRIDVARKLFEVMP-----EKNEVSWTAMLMGY 140
++F ++ K NV W T+I GY A L+ M E + ++ ++
Sbjct: 72 AHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAV 131
Query: 141 TQCGRIQDAWELFKAMPMKS-----VVASNSMILGLGQNGEVQKARVVFDQMREKDDATW 195
T ++ E ++ ++S + NS++ G+V A VFD+M EKD W
Sbjct: 132 TTMADVRLG-ETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAW 190
Query: 196 SGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVR 255
+ +I + G E + L+T M +G++ + +++S+LS CA + +L G++VH +++
Sbjct: 191 NSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIK 250
Query: 256 CQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKV 315
+++ ++VL+ +Y +CG + + K +FD K+ V W S+I G A G G++++++
Sbjct: 251 VGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIEL 310
Query: 316 FHEMFSS-GVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLL 374
F M S+ G++P ++T VG+L ACS+ G VKEG E F M+ +Y +EP+ EH+ CMVDLL
Sbjct: 311 FKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLL 370
Query: 375 GRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYI 434
RAGQV+ A + I++MP +P+ +IW +LLGAC H DLAE A ++LQLEP ++G Y+
Sbjct: 371 ARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYV 430
Query: 435 LLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIM 494
LLSN+YAS+ R+ DV ++RK M + V K PG S +EV +VH F D SHP+ I
Sbjct: 431 LLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGD-KSHPQSDAIY 489
Query: 495 RMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVM 554
L+++ G LR GY P S V DV+EEEK +++ YHSEK+A+A+ L+ PE PI V+
Sbjct: 490 AKLKEMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVV 549
Query: 555 KNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
KNLRVC DCH AIKL+SKV REI++RD +RFHHFK+G CSC+DYW
Sbjct: 550 KNLRVCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/328 (19%), Positives = 152/328 (46%), Gaps = 30/328 (9%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQM-------PEKNVVSWTVMLGGFIRDSRIDDA- 56
NV W ++RGY E G A +L+ +M P+ + + + + D R+ +
Sbjct: 84 NVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETI 143
Query: 57 -----RRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVN 111
R F + + Q +++ Y G V ++FD+MP+K++++W ++I+G+
Sbjct: 144 HSVVIRSGFGSL----IYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAE 199
Query: 112 NNRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWE----LFKAMPMKSVVA 163
N + + A L+ M K + + ++L + G + + K +++ +
Sbjct: 200 NGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHS 259
Query: 164 SNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQK-EG 222
SN ++ + G V++A+ +FD+M +K+ +W+ +I G+ E I+LF M+ EG
Sbjct: 260 SNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEG 319
Query: 223 VRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVA--SVLITMYIKCGELVK 280
+ + + +L C+ + G + ++ R ++ ++ + ++ + + G++ K
Sbjct: 320 LLPCEITFVGILYACSHCGMVKEGFEYFRRM-REEYKIEPRIEHFGCMVDLLARAGQVKK 378
Query: 281 GKLIFDNFASK-DIVMWNSIISGYAQYG 307
+ + ++V+W +++ +G
Sbjct: 379 AYEYIKSMPMQPNVVIWRTLLGACTVHG 406
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 100/198 (50%), Gaps = 18/198 (9%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV----VSWTVMLGGFIRDSRIDDA 56
MPE+++V+W +++ G+ E G EA L+ +M K + + +L + +
Sbjct: 182 MPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLG 241
Query: 57 RRLFDMMPEKDV---VAQTNMVLG-YCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+R+ M + + + +N++L Y + GRV+E + +FDEM KN +SWT++I G N
Sbjct: 242 KRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVN 301
Query: 113 NRIDVARKLFEVMPEKN-----EVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVAS--- 164
A +LF+ M E+++ +L + CG +++ +E F+ M + +
Sbjct: 302 GFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIE 361
Query: 165 --NSMILGLGQNGEVQKA 180
M+ L + G+V+KA
Sbjct: 362 HFGCMVDLLARAGQVKKA 379
>gi|34365551|gb|AAQ65087.1| At4g14850 [Arabidopsis thaliana]
Length = 634
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 223/618 (36%), Positives = 348/618 (56%), Gaps = 21/618 (3%)
Query: 2 PERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIR---DSRIDDARR 58
P RNVVSWT+++ G + G + A F++M + VV + R+ +
Sbjct: 19 PARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGK 78
Query: 59 LFDMMPEK-----DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNN 113
+ K DV + YC+ D+ R++FDE+P++N+ +W IS V +
Sbjct: 79 QIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDG 138
Query: 114 RIDVARKLF----EVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKS-----VVAS 164
R A + F + N +++ A L + + +L + ++S V
Sbjct: 139 RPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQL-HGLVLRSGFDTDVSVC 197
Query: 165 NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVR 224
N +I G+ +++ + ++F +M K+ +W ++ Y + + + L+ +K+ V
Sbjct: 198 NGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVE 257
Query: 225 VNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLI 284
+ + SVLS CA +A L+ GR +HA V+ + ++V S L+ MY KCG + +
Sbjct: 258 TSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQA 317
Query: 285 FDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGV--MPDDVTLVGVLSACSYTG 342
FD K++V NS+I GYA G + +L +F EM G P+ +T V +LSACS G
Sbjct: 318 FDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAG 377
Query: 343 KVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSL 402
V+ G +IF+SM+S Y +EP EHY+C+VD+LGRAG VE A + I+ MP +P +WG+L
Sbjct: 378 AVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGAL 437
Query: 403 LGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVI 462
ACR H K L +AA+ L +L+PK++G ++LLSN +A+ GR+ + +R+ ++ +
Sbjct: 438 QNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIK 497
Query: 463 KPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDE 522
K G SWI V+ +VH F +D SH + I L K+ + AGY PD L+D++E
Sbjct: 498 KGAGYSWITVKNQVHAFQAKD-RSHILNKEIQTTLAKLRNEMEAAGYKPDLKLSLYDLEE 556
Query: 523 EEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRD 582
EEK + +HSEKLA+A+GL+ LP VPIR+ KNLR+CGDCHS K +S + REII+RD
Sbjct: 557 EEKAAEVSHHSEKLALAFGLLSLPLSVPIRITKNLRICGDCHSFFKFVSGSVKREIIVRD 616
Query: 583 ANRFHHFKDGLCSCRDYW 600
NRFH FKDG+CSC+DYW
Sbjct: 617 NNRFHRFKDGICSCKDYW 634
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 111/269 (41%), Gaps = 39/269 (14%)
Query: 140 YTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMI 199
Y++ + A + + P ++VV+ S+I GL QNG A V F +MR
Sbjct: 2 YSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMR----------- 50
Query: 200 KVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFD 259
+EGV N + ASL G+Q+HA V+C
Sbjct: 51 --------------------REGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRI 90
Query: 260 VDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEM 319
+DV+V MY K + +FD +++ WN+ IS G ++++ F E
Sbjct: 91 LDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEF 150
Query: 320 FSSGVMPDDVTLVGVLSACSYTGKVKEGREIFE-SMKSKYLVEPKTEHYAC--MVDLLGR 376
P+ +T L+ACS + G ++ ++S + T+ C ++D G+
Sbjct: 151 RRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGF----DTDVSVCNGLIDFYGK 206
Query: 377 AGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
Q+ + + M + +A+ W SL+ A
Sbjct: 207 CKQIRSSEIIFTEMGTK-NAVSWCSLVAA 234
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 124/268 (46%), Gaps = 20/268 (7%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM----PEKNVVSWTVMLGGFIRDSRIDDA 56
+PERN+ +W A + V +G EA F + N +++ L ++
Sbjct: 119 IPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLG 178
Query: 57 RRLFDMMP----EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+L ++ + DV ++ Y + ++ IF EM KN +SW ++++ YV N
Sbjct: 179 MQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQN 238
Query: 113 NRIDVARKLF----EVMPEKNEVSWTAML-----MGYTQCGRIQDAWELFKAMPMKSVVA 163
+ + A L+ + + E ++ +++L M + GR A + KA +++
Sbjct: 239 HEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAV-KACVERTIFV 297
Query: 164 SNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGV 223
++++ G+ G ++ + FD+M EK+ T + +I Y +G + LF M G
Sbjct: 298 GSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGC 357
Query: 224 --RVNFPSLISVLSVCASLASLDHGRQV 249
N+ + +S+LS C+ ++++G ++
Sbjct: 358 GPTPNYMTFVSLLSACSRAGAVENGMKI 385
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 86/170 (50%), Gaps = 14/170 (8%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRD----SRIDDA 56
M +N VSW ++V YV+ +A L+ + + V + M+ + + ++
Sbjct: 220 MGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELG 279
Query: 57 RRL----FDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
R + E+ + + +V Y + G +++ + FDEMP+KN+++ ++I GY +
Sbjct: 280 RSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQ 339
Query: 113 NRIDVARKLFEVM------PEKNEVSWTAMLMGYTQCGRIQDAWELFKAM 156
++D+A LFE M P N +++ ++L ++ G +++ ++F +M
Sbjct: 340 GQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSM 389
Score = 43.5 bits (101), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 61/134 (45%), Gaps = 4/134 (2%)
Query: 271 MYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVT 330
MY K +L+ ++++V W S+ISG AQ G +L F EM GV+P+D T
Sbjct: 1 MYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFT 60
Query: 331 LVGVLSACSYTGKVKEGREIFE-SMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEA 389
A + G++I ++K +++ A D+ + +DA KL +
Sbjct: 61 FPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSA--FDMYCKTRLRDDARKLFDE 118
Query: 390 MPFEPDAIIWGSLL 403
+P E + W + +
Sbjct: 119 IP-ERNLETWNAFI 131
>gi|147780607|emb|CAN69113.1| hypothetical protein VITISV_031840 [Vitis vinifera]
Length = 714
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 206/553 (37%), Positives = 329/553 (59%), Gaps = 12/553 (2%)
Query: 58 RLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDV 117
R+ + D +V Y + G ++ + +FDEMP ++++SW +++SG +
Sbjct: 164 RVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNRDLVSWNSLMSGLSGRGYLGA 223
Query: 118 ARKLF-----EVMPEKNEVSWTAMLMGYTQCGRIQDAWELFK-----AMPMKSVVASNSM 167
F E + NEV+ +++ G + + L M K+ V NS+
Sbjct: 224 CLNAFCRMRTESGRQPNEVTLLSVVSACAXMGALDEGKSLHGVVVKLGMSGKAKVV-NSL 282
Query: 168 ILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNF 227
I G+ G + A +F++M + +W+ M+ ++ GY + +DLF LM++ G+ +
Sbjct: 283 INMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQ 342
Query: 228 PSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDN 287
+++++L C +HA + RC F+ D+ +A+ L+ +Y K G L + IF+
Sbjct: 343 ATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEE 402
Query: 288 FASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEG 347
+D + W ++++GYA + G +++K+F M GV D VT +LSACS++G V+EG
Sbjct: 403 IKDRDTIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEG 462
Query: 348 REIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACR 407
++ FE M Y VEP+ +HY+CMVDLLGR+G++EDA +LI++MP EP + +WG+LLGACR
Sbjct: 463 KKYFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALLGACR 522
Query: 408 THMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGC 467
+ ++L + A++LL L+P + YI+LSNIY++ G + +++R M++R + + PGC
Sbjct: 523 VYGNVELGKEVAEQLLSLDPSDHRNYIMLSNIYSAAGLWRXASKVRXLMKERRLTRNPGC 582
Query: 468 SWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVH 527
S+IE K+H F D + HP I LE++ + EAG P + FVLHD+DEE KV
Sbjct: 583 SFIEHGNKIHRFVVGDQL-HPRSDEIHTKLEELIRKIXEAGCAPKTEFVLHDIDEEVKVD 641
Query: 528 SLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFH 587
+ HSEKLA+A+GL+ GVP+ + KNLR+CGDCHS K S + R II+RD+ RFH
Sbjct: 642 MINKHSEKLAIAFGLLVTGSGVPLIITKNLRICGDCHSTAKFASLLEKRTIIIRDSKRFH 701
Query: 588 HFKDGLCSCRDYW 600
HF DGLCSCRDYW
Sbjct: 702 HFADGLCSCRDYW 714
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/344 (21%), Positives = 154/344 (44%), Gaps = 27/344 (7%)
Query: 1 MPERNVVSWTAMVRGYVEEG-----------MITEAGTLFWQMPEKNVVSWTVMLGGFIR 49
MP R++VSW +++ G G M TE+G ++ +VVS +G
Sbjct: 200 MPNRDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACAXMGALDE 259
Query: 50 DSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGY 109
+ M + VV +++ Y + G +D ++F+EMP ++++SW +M+ +
Sbjct: 260 GKSLHGVVVKLGMSGKAKVV--NSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIH 317
Query: 110 VNNNRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAMPM----KSV 161
+N + LF +M ++ + A+L T G + A + + +
Sbjct: 318 NHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADI 377
Query: 162 VASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKE 221
+ + +++ + G + + +F++++++D W+ M+ Y E I LF LM KE
Sbjct: 378 IIATALLNLYAKLGRLNASEDIFEEIKDRDTIAWTAMLAGYAVHACGREAIKLFDLMVKE 437
Query: 222 GVRVNFPSLISVLSVCASLASLDHGR---QVHAQLVRCQFDVDVYVASVLITMYIKCGEL 278
GV V+ + +LS C+ ++ G+ ++ +++ R + +D Y S ++ + + G L
Sbjct: 438 GVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHY--SCMVDLLGRSGRL 495
Query: 279 VKG-KLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFS 321
+LI +W +++ YG E +V ++ S
Sbjct: 496 EDAYELIKSMPMEPSSGVWGALLGACRVYGNVELGKEVAEQLLS 539
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 95/176 (53%), Gaps = 6/176 (3%)
Query: 229 SLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNF 288
SL+ +S C S++ + +HA++++ D ++ L++MY K G + +FD
Sbjct: 144 SLVFAISSCTSVS---YCSAIHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEM 200
Query: 289 ASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFS-SGVMPDDVTLVGVLSACSYTGKVKEG 347
++D+V WNS++SG + G L F M + SG P++VTL+ V+SAC+ G + EG
Sbjct: 201 PNRDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACAXMGALDEG 260
Query: 348 REIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
+ + + K + K + ++++ G+ G ++ A +L E MP + W S++
Sbjct: 261 KSL-HGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVR-SLVSWNSMV 314
>gi|297800728|ref|XP_002868248.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314084|gb|EFH44507.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 725
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 222/565 (39%), Positives = 336/565 (59%), Gaps = 19/565 (3%)
Query: 52 RIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVIS----WTTMIS 107
RI+ AR +FD M ++DVV M+ YC+ G +DE ++F+EM NV+ ++S
Sbjct: 164 RINYARNVFDEMSQRDVVTWNTMIERYCRFGLLDEAFKLFEEMKDSNVMPDEMILCNIVS 223
Query: 108 GYVNNNRIDVARKLFEVMPEKNEVS-----WTAMLMGYTQCGRIQDAWELFKAMPMKSVV 162
+ R +++ + E N+V TA++ Y G + A E F+ M ++++
Sbjct: 224 ACGRTGNMRYNRAIYDFLIE-NDVRMDTHLLTALVTMYAGAGCMDMAMEFFRKMSVRNLF 282
Query: 163 ASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEG 222
S +M+ G + G + ARV+FDQ KD W+ MI Y + E + +F M G
Sbjct: 283 VSTAMVSGYSKAGRLDDARVIFDQTEMKDLVCWTTMISAYAESDHPQEALRVFEEMCCSG 342
Query: 223 VRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGK 282
++ + +++SV+S C +L +LD + VH + + + + LI MY KCG L +
Sbjct: 343 IKPDVVTMLSVISACVNLGTLDKAKWVHRYTHLNGLESVLPIDNALINMYAKCGGLDAAR 402
Query: 283 LIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTG 342
+F+ ++++V W+S+I+ +A +G SL +F +M V P++VT VGVL CS++G
Sbjct: 403 DVFEKMPTRNVVSWSSMINAFAMHGEASDSLSLFAQMKQENVEPNEVTFVGVLYGCSHSG 462
Query: 343 KVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSL 402
V+EG++IF SM +Y + PK EHY CMVDL GRA + +A+++IE+MP P+ +IWGSL
Sbjct: 463 LVEEGKKIFASMTDEYNITPKIEHYGCMVDLFGRANLLREALEVIESMPMAPNVVIWGSL 522
Query: 403 LGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVI 462
+ ACR H +L+L E+AAK++L+LEP + G +L+SNIYA + R+ V +R M K+ V
Sbjct: 523 MSACRVHGELELGELAAKRILKLEPDHDGALVLMSNIYAREYRWDYVRIIRWIMEKKKVF 582
Query: 463 KPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDE 522
K G S I++ K H F D H + I L ++ L+ AGY PD VL DV+E
Sbjct: 583 KEKGLSRIDLNGKSHEFLIGD-KRHKQSNEIYTKLYEVVSKLKLAGYVPDGGSVLVDVEE 641
Query: 523 EEKVHSLRYHSEKLAVAYGLVKLPE-------GVPIRVMKNLRVCGDCHSAIKLISKVMG 575
EEK + +HSEKLA+ +GL+ + GV IR++KNLRVC DCH+ KL+SKV
Sbjct: 642 EEKKDLVLWHSEKLALCFGLMNKEKEEEKGSCGV-IRIVKNLRVCEDCHAFFKLVSKVYE 700
Query: 576 REIILRDANRFHHFKDGLCSCRDYW 600
EII+RD RFH +KDGLCSCRDYW
Sbjct: 701 LEIIVRDRTRFHRYKDGLCSCRDYW 725
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 87/367 (23%), Positives = 168/367 (45%), Gaps = 54/367 (14%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFI----RDSRIDDA 56
M +R+VV+W M+ Y G++ EA LF +M + NV+ ++L + R +
Sbjct: 175 MSQRDVVTWNTMIERYCRFGLLDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYN 234
Query: 57 RRLFDMMPEKDVVAQTNMVLG----YCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
R ++D + E DV T+++ Y G +D E F +M +N+ T M+SGY
Sbjct: 235 RAIYDFLIENDVRMDTHLLTALVTMYAGAGCMDMAMEFFRKMSVRNLFVSTAMVSGYSKA 294
Query: 113 NRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAM----------PMKSVV 162
R+D AR +F+ K+ V WT M+ Y + Q+A +F+ M M SV+
Sbjct: 295 GRLDDARVIFDQTEMKDLVCWTTMISAYAESDHPQEALRVFEEMCCSGIKPDVVTMLSVI 354
Query: 163 AS-----------------------------NSMILGLGQNGEVQKARVVFDQMREKDDA 193
++ N++I + G + AR VF++M ++
Sbjct: 355 SACVNLGTLDKAKWVHRYTHLNGLESVLPIDNALINMYAKCGGLDAARDVFEKMPTRNVV 414
Query: 194 TWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQL 253
+WS MI + G + + LF M++E V N + + VL C+ ++ G+++ A +
Sbjct: 415 SWSSMINAFAMHGEASDSLSLFAQMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASM 474
Query: 254 VRCQFDVDVYVA--SVLITMYIKCGELVKGKLIFDNFA-SKDIVMWNSIISGYAQYG--- 307
++++ + ++ ++ + L + + ++ + ++V+W S++S +G
Sbjct: 475 TD-EYNITPKIEHYGCMVDLFGRANLLREALEVIESMPMAPNVVIWGSLMSACRVHGELE 533
Query: 308 LGEKSLK 314
LGE + K
Sbjct: 534 LGELAAK 540
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 81/341 (23%), Positives = 151/341 (44%), Gaps = 44/341 (12%)
Query: 129 NEVSWTAMLMGYTQCGRIQDAWEL----FKAMPMKSVVASNSMILGLGQNGEVQKARVVF 184
+ +S+ +L ++ + + EL FK + ++ G + AR VF
Sbjct: 113 DRISFPPILKAVSKVSALFEGMELHGFAFKIATLSDPFVETGLMDMYAACGRINYARNVF 172
Query: 185 DQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLD 244
D+M ++D TW+ MI+ Y R G E LF M+ V + L +++S C ++
Sbjct: 173 DEMSQRDVVTWNTMIERYCRFGLLDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMR 232
Query: 245 HGRQVHAQLVRCQFDVDVYVASVLITMYI------------------------------- 273
+ R ++ L+ +D ++ + L+TMY
Sbjct: 233 YNRAIYDFLIENDVRMDTHLLTALVTMYAGAGCMDMAMEFFRKMSVRNLFVSTAMVSGYS 292
Query: 274 KCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVG 333
K G L ++IFD KD+V W ++IS YA+ +++L+VF EM SG+ PD VT++
Sbjct: 293 KAGRLDDARVIFDQTEMKDLVCWTTMISAYAESDHPQEALRVFEEMCCSGIKPDVVTMLS 352
Query: 334 VLSACSYTGKVKEGREI--FESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMP 391
V+SAC G + + + + + + V P ++++ + G ++ A + E MP
Sbjct: 353 VISACVNLGTLDKAKWVHRYTHLNGLESVLPIDN---ALINMYAKCGGLDAARDVFEKMP 409
Query: 392 FEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGP 432
+ + W S++ A H + A + Q++ +N P
Sbjct: 410 TR-NVVSWSSMINAFAMHGE---ASDSLSLFAQMKQENVEP 446
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 102/200 (51%), Gaps = 9/200 (4%)
Query: 195 WSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLV 254
++ +++ R G I + ++ G R + S +L + +++L G ++H
Sbjct: 82 FNSLLRDLSRSGEPRATILFYQRIRHVGGRFDRISFPPILKAVSKVSALFEGMELHGFAF 141
Query: 255 RCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLK 314
+ D +V + L+ MY CG + + +FD + +D+V WN++I Y ++GL +++ K
Sbjct: 142 KIATLSDPFVETGLMDMYAACGRINYARNVFDEMSQRDVVTWNTMIERYCRFGLLDEAFK 201
Query: 315 VFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEP----KTEHYACM 370
+F EM S VMPD++ L ++SAC TG ++ R I++ +L+E T +
Sbjct: 202 LFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYD-----FLIENDVRMDTHLLTAL 256
Query: 371 VDLLGRAGQVEDAMKLIEAM 390
V + AG ++ AM+ M
Sbjct: 257 VTMYAGAGCMDMAMEFFRKM 276
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 128/281 (45%), Gaps = 26/281 (9%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
M RN+ TAMV GY + G + +A +F Q K++V WT M+ + +A R+F
Sbjct: 276 MSVRNLFVSTAMVSGYSKAGRLDDARVIFDQTEMKDLVCWTTMISAYAESDHPQEALRVF 335
Query: 61 DMMP----EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISW----TTMISGYVNN 112
+ M + DVV +++ G +D+ + + + S +I+ Y
Sbjct: 336 EEMCCSGIKPDVVTMLSVISACVNLGTLDKAKWVHRYTHLNGLESVLPIDNALINMYAKC 395
Query: 113 NRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSV----VASNSMI 168
+D AR +FE MP +N VSW++M+ + G D+ LF M ++V V ++
Sbjct: 396 GGLDAARDVFEKMPTRNVVSWSSMINAFAMHGEASDSLSLFAQMKQENVEPNEVTFVGVL 455
Query: 169 LGLGQNGEVQKARVVFDQMREKDDAT-----WSGMIKVYERKGYELEVIDLFTLMQKEGV 223
G +G V++ + +F M ++ + T + M+ ++ R E +++ M
Sbjct: 456 YGCSHSGLVEEGKKIFASMTDEYNITPKIEHYGCMVDLFGRANLLREALEVIESMPMA-- 513
Query: 224 RVNFPSLI---SVLSVCASLASLDHGRQVHAQLVRCQFDVD 261
P+++ S++S C L+ G ++++ + D D
Sbjct: 514 ----PNVVIWGSLMSACRVHGELELGELAAKRILKLEPDHD 550
Score = 40.0 bits (92), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 43/220 (19%), Positives = 99/220 (45%), Gaps = 12/220 (5%)
Query: 229 SLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNF 288
+++ LS C SL +H +Q+HA ++R + + ++ L +F +
Sbjct: 17 TILEKLSFCKSL---NHIKQLHAHILRTVINHKLNSFLFNLSFSSSSINLSYALNLFSSI 73
Query: 289 AS-KDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEG 347
+ + +++NS++ ++ G ++ + + G D ++ +L A S + EG
Sbjct: 74 SPLPESIVFNSLLRDLSRSGEPRATILFYQRIRHVGGRFDRISFPPILKAVSKVSALFEG 133
Query: 348 REIFE-SMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGAC 406
E+ + K L +P E ++D+ G++ A + + M + D + W +++
Sbjct: 134 MELHGFAFKIATLSDPFVE--TGLMDMYAACGRINYARNVFDEMS-QRDVVTWNTMI--- 187
Query: 407 RTHMKLDLAEVAAKKLLQLEPKNAGP-YILLSNIYASQGR 445
+ + L + A K +++ N P ++L NI ++ GR
Sbjct: 188 ERYCRFGLLDEAFKLFEEMKDSNVMPDEMILCNIVSACGR 227
>gi|15231358|ref|NP_187990.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273354|sp|Q9LIC3.1|PP227_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial; Flags: Precursor
gi|9294022|dbj|BAB01925.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332641888|gb|AEE75409.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 628
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 225/619 (36%), Positives = 349/619 (56%), Gaps = 49/619 (7%)
Query: 29 FWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGR-VDEG 87
F P V+ + + + R+ +A M+ + + +L C D R + +G
Sbjct: 12 FSSSPTNYVLQTILPISQLCSNGRLQEALLEMAMLGPEMGFHGYDALLNACLDKRALRDG 71
Query: 88 REIFDEMPKKNVISWT----TMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQC 143
+ + M K + T ++ Y + ++ ARK+ + MPEKN VSWTAM+ Y+Q
Sbjct: 72 QRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQT 131
Query: 144 GRIQDAWELFKAMPMKSVVASNSMI-------------LGLGQN---------------- 174
G +A +F M M+S N LGLG+
Sbjct: 132 GHSSEALTVFAEM-MRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFV 190
Query: 175 -----------GEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGV 223
G++++AR +F+ + E+D + + +I Y + G + E +++F + EG+
Sbjct: 191 GSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGM 250
Query: 224 RVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKL 283
N+ + S+L+ + LA LDHG+Q H ++R + + + LI MY KCG L +
Sbjct: 251 SPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARR 310
Query: 284 IFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSG-VMPDDVTLVGVLSACSYTG 342
+FDN + + WN+++ GY+++GLG + L++F M V PD VTL+ VLS CS+
Sbjct: 311 LFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGR 370
Query: 343 KVKEGREIFESM-KSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGS 401
G IF+ M +Y +P TEHY C+VD+LGRAG++++A + I+ MP +P A + GS
Sbjct: 371 MEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGS 430
Query: 402 LLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNV 461
LLGACR H+ +D+ E ++L+++EP+NAG Y++LSN+YAS GR+ DV +R M ++ V
Sbjct: 431 LLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYASAGRWADVNNVRAMMMQKAV 490
Query: 462 IKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVD 521
K PG SWI+ E+ +H F D +HP ++ +++I +++AGY PD S VL+DVD
Sbjct: 491 TKEPGRSWIQHEQTLHYFHAND-RTHPRREEVLAKMKEISIKMKQAGYVPDLSCVLYDVD 549
Query: 522 EEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILR 581
EE+K L HSEKLA+ +GL+ EG+PIRV KNLR+C DCH+ K+ SKV RE+ LR
Sbjct: 550 EEQKEKMLLGHSEKLALTFGLIATGEGIPIRVFKNLRICVDCHNFAKIFSKVFEREVSLR 609
Query: 582 DANRFHHFKDGLCSCRDYW 600
D NRFH DG+CSC DYW
Sbjct: 610 DKNRFHQIVDGICSCGDYW 628
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 142/265 (53%), Gaps = 25/265 (9%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM----PEKNVVSWTVMLGGFIRDSRIDDA 56
MPE+NVVSWTAM+ Y + G +EA T+F +M + N ++ +L IR S +
Sbjct: 113 MPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLG 172
Query: 57 RRLFDMMP----EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+++ ++ + + ++++ Y + G++ E REIF+ +P+++V+S T +I+GY
Sbjct: 173 KQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQL 232
Query: 113 NRIDVARKLFEVMPEK----NEVSWTAMLMGYTQC-----GRIQDAWELFKAMPMKSVVA 163
+ A ++F + + N V++ ++L + G+ L + +P +V+
Sbjct: 233 GLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVL- 291
Query: 164 SNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEG- 222
NS+I + G + AR +FD M E+ +W+ M+ Y + G EV++LF LM+ E
Sbjct: 292 QNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKR 351
Query: 223 VRVNFPSLISVLSVCASLASLDHGR 247
V+ + +L++VLS C+ HGR
Sbjct: 352 VKPDAVTLLAVLSGCS------HGR 370
>gi|28392910|gb|AAO41891.1| putative selenium-binding protein [Arabidopsis thaliana]
Length = 630
Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust.
Identities = 215/534 (40%), Positives = 316/534 (59%), Gaps = 39/534 (7%)
Query: 103 TTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAM------ 156
+I+ YV N ++ A +LF+ MP++N +SWT M+ Y++C Q A EL M
Sbjct: 100 NVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVR 159
Query: 157 ----PMKSVVAS--------------------------NSMILGLGQNGEVQKARVVFDQ 186
SV+ S +++I + GE + A VFD+
Sbjct: 160 PNVYTYSSVLRSCNGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDE 219
Query: 187 MREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHG 246
M D W+ +I + + ++LF M++ G +L SVL C LA L+ G
Sbjct: 220 MVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELG 279
Query: 247 RQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQY 306
Q H +V+ +D D+ + + L+ MY KCG L +F+ +D++ W+++ISG AQ
Sbjct: 280 MQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQN 337
Query: 307 GLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEH 366
G +++LK+F M SSG P+ +T+VGVL ACS+ G +++G F SMK Y ++P EH
Sbjct: 338 GYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREH 397
Query: 367 YACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLE 426
Y CM+DLLG+AG+++DA+KL+ M EPDA+ W +LLGACR + LAE AAKK++ L+
Sbjct: 398 YGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALD 457
Query: 427 PKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVS 486
P++AG Y LLSNIYA+ ++ V E+R MR R + K PGCSWIEV K++H F D S
Sbjct: 458 PEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGD-NS 516
Query: 487 HPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLP 546
HP+ + + L ++ L GY P+++FVL D++ E+ SLR+HSEKLA+A+GL+ LP
Sbjct: 517 HPQIVEVSKKLNQLIHRLTGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAFGLMTLP 576
Query: 547 EGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
IR+ KNLR+CGDCH KL SK+ R I++R R+HHF+DG CSC DYW
Sbjct: 577 IEKVIRIRKNLRICGDCHVFCKLASKLEIRSIVIRGPIRYHHFQDGKCSCGDYW 630
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 125/257 (48%), Gaps = 11/257 (4%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSR-IDDARRL 59
MP+RNV+SWT M+ Y + + +A L M NV +R + D R L
Sbjct: 122 MPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDVRML 181
Query: 60 FDMMP----EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRI 115
+ E DV ++ ++ + + G ++ +FDEM + I W ++I G+ N+R
Sbjct: 182 HCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRS 241
Query: 116 DVARKLFEVMPEKN----EVSWTAMLMGYTQCGRIQDAWELFKAMPM--KSVVASNSMIL 169
DVA +LF+ M + + T++L T ++ + + + ++ +N+++
Sbjct: 242 DVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYDQDLILNNALVD 301
Query: 170 GLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPS 229
+ G ++ A VF+QM+E+D TWS MI + GY E + LF M+ G + N+ +
Sbjct: 302 MYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYIT 361
Query: 230 LISVLSVCASLASLDHG 246
++ VL C+ L+ G
Sbjct: 362 IVGVLFACSHAGLLEDG 378
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 111/246 (45%), Gaps = 51/246 (20%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDM 62
E +V +A++ + + G +A ++F +M + + W ++GGF ++SR D A LF
Sbjct: 191 ESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKR 250
Query: 63 MP-------------------------------------EKDVVAQTNMVLGYCQDGRVD 85
M ++D++ +V YC+ G ++
Sbjct: 251 MKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYDQDLILNNALVDMYCKCGSLE 310
Query: 86 EGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVM----PEKNEVSWTAMLMGYT 141
+ +F++M +++VI+W+TMISG N A KLFE M + N ++ +L +
Sbjct: 311 DALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACS 370
Query: 142 QCGRIQDAWELFKAM-------PMKSVVASNSMILGLGQNGEVQKARVVFDQMR-EKDDA 193
G ++D W F++M P++ MI LG+ G++ A + ++M E D
Sbjct: 371 HAGLLEDGWYYFRSMKKLYGIDPVRE--HYGCMIDLLGKAGKLDDAVKLLNEMECEPDAV 428
Query: 194 TWSGMI 199
TW ++
Sbjct: 429 TWRTLL 434
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 97/206 (47%), Gaps = 21/206 (10%)
Query: 218 MQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGE 277
+Q G+ + + ++ C S ++ G + L +++ +VLI MY+K
Sbjct: 52 LQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNL 111
Query: 278 LVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSA 337
L +FD ++++ W ++IS Y++ + +K+L++ M V P+ T VL +
Sbjct: 112 LNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRS 171
Query: 338 CS--------YTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEA 389
C+ + G +KEG E S V + ++D+ + G+ EDA+ + +
Sbjct: 172 CNGMSDVRMLHCGIIKEGLE------SDVFVR------SALIDVFAKLGEPEDALSVFDE 219
Query: 390 MPFEPDAIIWGSLLGACRTHMKLDLA 415
M DAI+W S++G + + D+A
Sbjct: 220 M-VTGDAIVWNSIIGGFAQNSRSDVA 244
>gi|125553513|gb|EAY99222.1| hypothetical protein OsI_21180 [Oryza sativa Indica Group]
Length = 818
Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust.
Identities = 223/621 (35%), Positives = 349/621 (56%), Gaps = 22/621 (3%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM----PEKNVVSWTVMLGGFIRDSRIDDA 56
M +VV W A+V G++ +A L +M PE NV +W +L G R R +A
Sbjct: 199 MGAGSVVPWNAVVACCARLGLVDDALELAARMSRSGPEPNVATWNTVLSGCSRHGRDREA 258
Query: 57 RRLFDMMPEK----DVVAQTNMVLGYCQDGRVDEGREI----FDEMPKKNVISWTTMISG 108
+ M ++ D ++++ G + G EI + +V + T ++
Sbjct: 259 LGVVASMLKQGLRPDATTVSSLLKSVANTGLLRHGMEIHCFFLRNQLEPDVYTGTALVDM 318
Query: 109 YVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMK----SVVAS 164
Y R+D A+K+F+ + +N +W +++ GY GR A EL + M +
Sbjct: 319 YAKCGRLDCAQKVFDALEHRNLTTWNSLVAGYANAGRFDIALELVELMKKNRLDPDITTW 378
Query: 165 NSMILGLGQNGEVQKARVVFDQMREK----DDATWSGMIKVYERKGYELEVIDLFTLMQK 220
N +I G NG+ +A ++ Q++ + +W+ +I G + MQK
Sbjct: 379 NGLITGYSMNGQSSQAVLLLRQIKAAGVTPNVVSWTSLISGSCHNGEYEDSFYFCHEMQK 438
Query: 221 EGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVK 280
+GV+ + ++ +L CA LA G+++H +R +D D+ V++ LI MY K G LV
Sbjct: 439 DGVQPSLVTMSVLLRACAGLALQKKGKELHCFALRRAYDCDMVVSTALIDMYSKGGSLVS 498
Query: 281 GKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSY 340
K+IF++ K++V+ N++++G A +G G +++++FH+M++SG+ PD +T +L+AC
Sbjct: 499 AKVIFESIQQKNLVLCNAMLTGLAVHGQGREAIELFHDMWNSGLKPDSITFTALLTACRS 558
Query: 341 TGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWG 400
G V EG E F+ M++KY V+P TE+YACMVDLL R G +++AM IE P +P A WG
Sbjct: 559 MGLVTEGWEYFDGMETKYGVKPTTENYACMVDLLARCGYLDEAMDFIERSPIDPGASHWG 618
Query: 401 SLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRN 460
+LL C H L LAEVAA+ L +LEP N+ Y+L+ N+Y + + + L+ M+ R
Sbjct: 619 ALLTGCSIHGNLALAEVAARNLFRLEPYNSANYLLMMNLYEYERMYDEAESLKYAMKARG 678
Query: 461 VIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDV 520
V PG SWI++E+ +H+F D HPE I L ++ +++AGY PD+S + ++V
Sbjct: 679 VDSRPGWSWIQIEQGIHVFE-VDGKPHPETAEIYEELIRLVFQIKKAGYVPDTSCIAYNV 737
Query: 521 DEEEKVHSLRYHSEKLAVAYGLVKLPEG-VPIRVMKNLRVCGDCHSAIKLISKVMGREII 579
EEEK L H+EKLA+ YGL++ P+RVMKN R+C DCH K IS + R+II
Sbjct: 738 QEEEKEKLLLGHTEKLAITYGLIRSDASRAPVRVMKNTRMCNDCHEVAKHISSLCDRQII 797
Query: 580 LRDANRFHHFKDGLCSCRDYW 600
LRDA RFHHF DG CSC DYW
Sbjct: 798 LRDAVRFHHFVDGKCSCNDYW 818
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 122/302 (40%), Gaps = 42/302 (13%)
Query: 144 GRIQDAWELFKAMPMKSVVASNSMILGL-GQNGEVQKARVVFDQMREKDDATWSGMIKVY 202
GR A+ L A+ +V + G+ +N +V A V D M W+ ++
Sbjct: 157 GRAVHAYALKLALDAHPLVPG--FLAGMYAENADVAAATRVLDAMGAGSVVPWNAVVACC 214
Query: 203 ERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVC------------------------- 237
R G + ++L M + G N + +VLS C
Sbjct: 215 ARLGLVDDALELAARMSRSGPEPNVATWNTVLSGCSRHGRDREALGVVASMLKQGLRPDA 274
Query: 238 ----------ASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDN 287
A+ L HG ++H +R Q + DVY + L+ MY KCG L + +FD
Sbjct: 275 TTVSSLLKSVANTGLLRHGMEIHCFFLRNQLEPDVYTGTALVDMYAKCGRLDCAQKVFDA 334
Query: 288 FASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEG 347
+++ WNS+++GYA G + +L++ M + + PD T G+++ S G+ +
Sbjct: 335 LEHRNLTTWNSLVAGYANAGRFDIALELVELMKKNRLDPDITTWNGLITGYSMNGQSSQA 394
Query: 348 REIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMP---FEPDAIIWGSLLG 404
+ +K+ V P + ++ G+ ED+ M +P + LL
Sbjct: 395 VLLLRQIKAAG-VTPNVVSWTSLISGSCHNGEYEDSFYFCHEMQKDGVQPSLVTMSVLLR 453
Query: 405 AC 406
AC
Sbjct: 454 AC 455
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 114/283 (40%), Gaps = 26/283 (9%)
Query: 190 KDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQV 249
KD W+ + + E I +F MQ GV GR V
Sbjct: 119 KDAVLWNKHVAMLAEAEEWDEAIAVFREMQARGV------------------PRRRGRAV 160
Query: 250 HAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLG 309
HA ++ D V L MY + ++ + D + +V WN++++ A+ GL
Sbjct: 161 HAYALKLALDAHPLVPGFLAGMYAENADVAAATRVLDAMGAGSVVPWNAVVACCARLGLV 220
Query: 310 EKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYAC 369
+ +L++ M SG P+ T VLS CS G+ +E + SM + L P +
Sbjct: 221 DDALELAARMSRSGPEPNVATWNTVLSGCSRHGRDREALGVVASMLKQGL-RPDATTVSS 279
Query: 370 MVDLLGRAGQVEDAMKL---IEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLE 426
++ + G + M++ EPD +L+ +LD A+ K LE
Sbjct: 280 LLKSVANTGLLRHGMEIHCFFLRNQLEPDVYTGTALVDMYAKCGRLDCAQ---KVFDALE 336
Query: 427 PKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSW 469
+N + L YA+ GRF EL + M K+N + P +W
Sbjct: 337 HRNLTTWNSLVAGYANAGRFDIALELVELM-KKNRLDPDITTW 378
Score = 45.8 bits (107), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 87/229 (37%), Gaps = 41/229 (17%)
Query: 217 LMQKEGVRVNFPS-----LISVLSVCASLAS--LDH------GRQVHAQLVRCQFDVDVY 263
L+ +R P L+S+L CA L DH Q+H+ VR D
Sbjct: 29 LLNAAALRTGVPPYSAGVLVSLLRDCADLHGDDTDHRVARRLAPQLHSLAVRTGLSRDPR 88
Query: 264 VASVLITMYIKCGELVKGKLIFDNFA---SKDIVMWNSIISGYAQYGLGEKSLKVFHEMF 320
V L+ + + G + A +KD V+WN ++ A+ ++++ VF EM
Sbjct: 89 VTCALVDLLARLGRGPSCARLLHEAAEDGAKDAVLWNKHVAMLAEAEEWDEAIAVFREMQ 148
Query: 321 SSGV---------------MPDDVTLVGVLSACSY--TGKVKEGREIFESMKSKYLVEPK 363
+ GV D LV A Y V + ++M + +V P
Sbjct: 149 ARGVPRRRGRAVHAYALKLALDAHPLVPGFLAGMYAENADVAAATRVLDAMGAGSVV-PW 207
Query: 364 TEHYACMVDLLGRAGQVEDAMKLIEAMPF---EPDAIIWGSLLGACRTH 409
AC R G V+DA++L M EP+ W ++L C H
Sbjct: 208 NAVVAC----CARLGLVDDALELAARMSRSGPEPNVATWNTVLSGCSRH 252
>gi|148906747|gb|ABR16520.1| unknown [Picea sitchensis]
Length = 644
Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust.
Identities = 205/515 (39%), Positives = 302/515 (58%), Gaps = 36/515 (6%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMP--------------------------- 33
MP +NVVSWTAM+ Y EA F++M
Sbjct: 126 MPVKNVVSWTAMIAAYARHEHGQEALGFFYEMQDVGIQPNHFTFASILPACTDLEVLGEF 185
Query: 34 ---------EKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRV 84
E NV ++ + + I+ AR LFD MP++DVV+ M+ GY Q+G +
Sbjct: 186 HDEIVKGGFESNVFVGNGLVDMYAKRGCIEFARELFDKMPQRDVVSWNAMIAGYVQNGLI 245
Query: 85 DEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCG 144
++ ++F E+PK++VI+W TM++GY ++ A +LFE MPE+N VSW M+ GY Q G
Sbjct: 246 EDALKLFQEIPKRDVITWNTMMAGYAQCGDVENAVELFEKMPEQNLVSWNTMIAGYVQNG 305
Query: 145 RIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYER 204
+++A++LF+ MP ++V++ N++I G QNG+V++A +F M E + +W+ MI Y +
Sbjct: 306 SVKEAFKLFQIMPERNVISWNAVISGFAQNGQVEEALKLFKTMPECNVVSWNAMIAGYSQ 365
Query: 205 KGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYV 264
G + LF MQ ++ N + VL CA+LA L+ G + H ++R F DV V
Sbjct: 366 NGQAENALKLFGQMQMVDMKPNTETFAIVLPACAALAVLEQGNEAHEVVIRSGFQSDVLV 425
Query: 265 ASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGV 324
+ L+ MY KCG + + +FD +D +++I GYA G ++SL++F +M +G+
Sbjct: 426 GNTLVGMYAKCGSIEDARKVFDRMRQQDSASLSAMIVGYAINGCSKESLELFEQMQFTGL 485
Query: 325 MPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAM 384
PD VT VGVLSAC + G V EGR+ F+ M Y + P EHY CM+DLLGRAG ++A
Sbjct: 486 KPDRVTFVGVLSACCHAGLVDEGRQYFDIMTRFYHITPAMEHYGCMIDLLGRAGCFDEAN 545
Query: 385 KLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQG 444
LI MP +PDA +WGSLL ACRTH +DL E A+ L+ L P+N PY+LLSNIYA+ G
Sbjct: 546 DLINKMPIKPDADMWGSLLSACRTHNNIDLGEKVAQHLIALNPQNPAPYVLLSNIYAAAG 605
Query: 445 RFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMF 479
R+ D+ +R M+ R V K GCSWI ++K+VH F
Sbjct: 606 RWDDIGSVRNRMKDRKVKKKLGCSWIVIKKQVHAF 640
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 109/445 (24%), Positives = 204/445 (45%), Gaps = 66/445 (14%)
Query: 11 AMVRGYVEEGMITEAGTLFWQMPEKNV----VSWTVMLGGFIRDSRIDDARRLFDMMPE- 65
+V+ ++G + EA + M E + ++ +L G + + DA+ L M +
Sbjct: 34 GLVKSLCKQGRLREALHILQDMVENGIWPHSSTYDSLLQGCLNAKSLPDAKLLHAHMIQT 93
Query: 66 ----KDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKL 121
+D+ +V Y + G + E R +FDEMP KNV+SWT MI+ Y + A
Sbjct: 94 QFECQDISLGNKLVSIYVKLGSLVEARRVFDEMPVKNVVSWTAMIAAYARHEHGQEALGF 153
Query: 122 F----EVMPEKNEVSWTAMLMG--------------------------------YTQCGR 145
F +V + N ++ ++L Y + G
Sbjct: 154 FYEMQDVGIQPNHFTFASILPACTDLEVLGEFHDEIVKGGFESNVFVGNGLVDMYAKRGC 213
Query: 146 IQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERK 205
I+ A ELF MP + VV+ N+MI G QNG ++ A +F ++ ++D TW+ M+ Y +
Sbjct: 214 IEFARELFDKMPQRDVVSWNAMIAGYVQNGLIEDALKLFQEIPKRDVITWNTMMAGYAQC 273
Query: 206 GYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHA-QLVRCQFDVDVYV 264
G ++LF M ++ + V++ ++I+ + +G A +L + + +V
Sbjct: 274 GDVENAVELFEKMPEQNL-VSWNTMIA--------GYVQNGSVKEAFKLFQIMPERNVIS 324
Query: 265 ASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGV 324
+ +I+ + + G++ + +F ++V WN++I+GY+Q G E +LK+F +M +
Sbjct: 325 WNAVISGFAQNGQVEEALKLFKTMPECNVVSWNAMIAGYSQNGQAENALKLFGQMQMVDM 384
Query: 325 MPDDVTLVGVLSACSYTGKVKEGREIFE-----SMKSKYLVEPKTEHYACMVDLLGRAGQ 379
P+ T VL AC+ +++G E E +S LV +V + + G
Sbjct: 385 KPNTETFAIVLPACAALAVLEQGNEAHEVVIRSGFQSDVLVGNT------LVGMYAKCGS 438
Query: 380 VEDAMKLIEAMPFEPDAIIWGSLLG 404
+EDA K+ + M + A + ++G
Sbjct: 439 IEDARKVFDRMRQQDSASLSAMIVG 463
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 145/285 (50%), Gaps = 9/285 (3%)
Query: 179 KARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCA 238
KAR + +E G++K ++G E + + M + G+ + + S+L C
Sbjct: 16 KARTNTLKTKEGTGKGNDGLVKSLCKQGRLREALHILQDMVENGIWPHSSTYDSLLQGCL 75
Query: 239 SLASLDHGRQVHAQLVRCQFDV-DVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWN 297
+ SL + +HA +++ QF+ D+ + + L+++Y+K G LV+ + +FD K++V W
Sbjct: 76 NAKSLPDAKLLHAHMIQTQFECQDISLGNKLVSIYVKLGSLVEARRVFDEMPVKNVVSWT 135
Query: 298 SIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSK 357
++I+ YA++ G+++L F+EM G+ P+ T +L AC+ + E + E +K
Sbjct: 136 AMIAAYARHEHGQEALGFFYEMQDVGIQPNHFTFASILPACTDLEVLGEFHD--EIVKGG 193
Query: 358 YLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEV 417
+ E +VD+ + G +E A +L + MP + D + W +++ +++ L E
Sbjct: 194 F--ESNVFVGNGLVDMYAKRGCIEFARELFDKMP-QRDVVSWNAMIAG---YVQNGLIED 247
Query: 418 AAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVI 462
A K ++ ++ + + YA G + EL + M ++N++
Sbjct: 248 ALKLFQEIPKRDVITWNTMMAGYAQCGDVENAVELFEKMPEQNLV 292
>gi|115466812|ref|NP_001057005.1| Os06g0185800 [Oryza sativa Japonica Group]
gi|55773756|dbj|BAD72439.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113595045|dbj|BAF18919.1| Os06g0185800 [Oryza sativa Japonica Group]
gi|125596288|gb|EAZ36068.1| hypothetical protein OsJ_20378 [Oryza sativa Japonica Group]
Length = 787
Score = 410 bits (1054), Expect = e-111, Method: Compositional matrix adjust.
Identities = 227/639 (35%), Positives = 353/639 (55%), Gaps = 52/639 (8%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRID-------------DA 56
+A+ + Y + A +F +P + V W +L G ++ DA
Sbjct: 153 SALAKLYFVLSRVDHARKVFDTVPSPDTVLWNTLLAGLSGSEAVESFARMVCDGSVRPDA 212
Query: 57 RRLFDMMPEKDVVAQ-----------------------TNMVLGYCQDGRVDEGREIFDE 93
L ++P VA T ++ Y + G V+ R +FD
Sbjct: 213 TTLASVLPAAAEVADVTMGRCVHSFAEKCGLAEHEHVLTGLISLYSKCGDVESARCLFDM 272
Query: 94 MPKKNVISWTTMISGYVNNNRIDVARKLF-EVMPE---KNEVSWTAML-----MGYTQCG 144
M K +++++ +ISGY N + + LF E+M N + A++ G+
Sbjct: 273 MEKPDLVAYNALISGYSVNGMVGSSVNLFTELMTLGLWPNSSTLVALIPVHSPFGHDLLA 332
Query: 145 RIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYER 204
+ + L S V++ L N +++ AR FD M EK +W+ MI Y +
Sbjct: 333 QCLHGFVLKSGFTANSPVSTAITTLHCRLN-DMESARKAFDTMPEKTMESWNAMISGYAQ 391
Query: 205 KGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYV 264
G + LF M K VR N ++ S LS CA L +L G+ +H + + +VYV
Sbjct: 392 NGLTEMAVALFEQMVKLNVRPNPITISSTLSACAQLGALSLGKWLHRIITEEDLEPNVYV 451
Query: 265 ASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGV 324
+ LI MY KCG + + + IF+ +K++V WN++I+GY +G G ++LK++ +M + +
Sbjct: 452 MTALIDMYAKCGSISEARRIFNTMDNKNVVSWNAMIAGYGLHGQGAEALKLYKDMLDAHL 511
Query: 325 MPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAM 384
+P T + VL ACS+ G V+EG ++F SM Y + P EH CMVDLLGRAGQ+++A
Sbjct: 512 LPTSATFLSVLYACSHGGLVEEGWKVFRSMTDDYAINPGIEHCTCMVDLLGRAGQLKEAF 571
Query: 385 KLIEAMPFEPDAI---IWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYA 441
+LI P A+ +WG+LLGAC H DLA++A++KL +L+P+N+G Y+LLSN++
Sbjct: 572 ELISEFP--KSAVGPGVWGALLGACMVHKDSDLAKLASQKLFELDPENSGYYVLLSNLHT 629
Query: 442 SQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIG 501
S+ ++ + A +R+ + R ++K PG + IE+ K H+F D +HP+ I LEK+
Sbjct: 630 SKKQYSEAAVVRQEAKSRKLVKTPGYTLIEIGNKPHVFMAGD-RAHPQSEAIYSYLEKLT 688
Query: 502 GLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCG 561
+ EAGY P++ L+DV+EEEK H ++ HSEKLA+A+GL+ G IR++KNLRVC
Sbjct: 689 AKMIEAGYRPETEAALYDVEEEEKEHMVKVHSEKLAIAFGLLSTEPGTEIRIIKNLRVCL 748
Query: 562 DCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
DCH+A K ISKV R I++RDA+RFHHF+DG+CSC DYW
Sbjct: 749 DCHNATKFISKVTQRLIVVRDASRFHHFRDGVCSCGDYW 787
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 100/197 (50%), Gaps = 17/197 (8%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV----VSWTVMLGGFIRDSRIDDA 56
MPE+ + SW AM+ GY + G+ A LF QM + NV ++ + L + +
Sbjct: 374 MPEKTMESWNAMISGYAQNGLTEMAVALFEQMVKLNVRPNPITISSTLSACAQLGALSLG 433
Query: 57 RRLFDMMPEKD----VVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+ L ++ E+D V T ++ Y + G + E R IF+ M KNV+SW MI+GY +
Sbjct: 434 KWLHRIITEEDLEPNVYVMTALIDMYAKCGSISEARRIFNTMDNKNVVSWNAMIAGYGLH 493
Query: 113 NRIDVARKLFEVMPEKN----EVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVAS---- 164
+ A KL++ M + + ++ ++L + G +++ W++F++M +
Sbjct: 494 GQGAEALKLYKDMLDAHLLPTSATFLSVLYACSHGGLVEEGWKVFRSMTDDYAINPGIEH 553
Query: 165 -NSMILGLGQNGEVQKA 180
M+ LG+ G++++A
Sbjct: 554 CTCMVDLLGRAGQLKEA 570
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 70/145 (48%), Gaps = 9/145 (6%)
Query: 261 DVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMF 320
D +VAS L +Y + + +FD S D V+WN++++G + G ++++ F M
Sbjct: 148 DTFVASALAKLYFVLSRVDHARKVFDTVPSPDTVLWNTLLAGLS----GSEAVESFARMV 203
Query: 321 SSG-VMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEH-YACMVDLLGRAG 378
G V PD TL VL A + V GR + + L E EH ++ L + G
Sbjct: 204 CDGSVRPDATTLASVLPAAAEVADVTMGRCVHSFAEKCGLAE--HEHVLTGLISLYSKCG 261
Query: 379 QVEDAMKLIEAMPFEPDAIIWGSLL 403
VE A L + M +PD + + +L+
Sbjct: 262 DVESARCLFDMME-KPDLVAYNALI 285
>gi|242041629|ref|XP_002468209.1| hypothetical protein SORBIDRAFT_01g041740 [Sorghum bicolor]
gi|241922063|gb|EER95207.1| hypothetical protein SORBIDRAFT_01g041740 [Sorghum bicolor]
Length = 635
Score = 410 bits (1054), Expect = e-111, Method: Compositional matrix adjust.
Identities = 213/560 (38%), Positives = 324/560 (57%), Gaps = 13/560 (2%)
Query: 53 IDDARRLFDMMPEKDVVAQTNMVLGYCQDGR-VDEGREIFDEMPKKNVISWTTMISGYVN 111
+ DA L +P DV + +V + R + R +FD MP+++ SW+ ++S +
Sbjct: 77 LPDALALLSSLPSTDVCSYNTLVAALGRSPRGLASARALFDRMPRRDHFSWSAIVSAHAR 136
Query: 112 NNRIDVARKLFEVMPEK-------NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVAS 164
+ + A ++ M + NE + ++ L T + EL + + + A
Sbjct: 137 HGQPRAALAIYRRMLREPGSAGVDNEFTASSALAAATAARCARAGRELHCHVVRRGIDAD 196
Query: 165 NSMILGLG----QNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQK 220
+ L + G V AR VFD+M +D +W+ M++ Y + E LF M +
Sbjct: 197 AVVWSALADMYAKCGRVDDARSVFDRMPVRDVVSWTAMVERYFDARRDGEGFRLFVRMLR 256
Query: 221 EGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVK 280
G++ N + VL CA S G+QVH ++ + + + S L+ MY K G++
Sbjct: 257 SGIQPNEFTYAGVLRACAEFTSEKLGKQVHGRMTKSRAGDSCFAESALVHMYSKYGDMGT 316
Query: 281 GKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSY 340
+F D+V W ++ISGYAQ G +++L+ F + SG PD VT VGVLSAC++
Sbjct: 317 AVRVFRGMPKLDLVSWTAMISGYAQNGQPDEALRYFDMLLRSGCRPDHVTFVGVLSACAH 376
Query: 341 TGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWG 400
G V +G IF S+K +Y +E +HYAC++DLL R+G E A ++I M +P+ +W
Sbjct: 377 AGLVDKGLSIFHSIKDEYGIEHTADHYACVIDLLSRSGLFERAEEMINTMSVKPNKFLWA 436
Query: 401 SLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRN 460
SLLG CR H + LA AA+ L ++EP+N Y+ L+NIYAS G F +V R+ M +
Sbjct: 437 SLLGGCRIHKNVRLARWAAEALFEIEPENPATYVTLANIYASVGLFDEVENTRRIMELKG 496
Query: 461 VIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDV 520
+ K P SWIEV ++H+F D + HP+ + +L+K+ +RE GY D+ FVLHDV
Sbjct: 497 ITKMPASSWIEVGTRMHVFLVGDKL-HPQAEQVYALLKKLYVKMREEGYVADTGFVLHDV 555
Query: 521 DEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIIL 580
++E+K + YHSE+LAVA+G++ P+G PI+V KNLR+CGDCH+ IKLISK++ REII+
Sbjct: 556 EDEQKQQDIGYHSERLAVAFGIIATPKGAPIKVFKNLRICGDCHTTIKLISKIVQREIIV 615
Query: 581 RDANRFHHFKDGLCSCRDYW 600
RD+NRFHHFK+G CSCRDYW
Sbjct: 616 RDSNRFHHFKNGSCSCRDYW 635
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 77/359 (21%), Positives = 147/359 (40%), Gaps = 61/359 (16%)
Query: 1 MPERNVVSWTAMVR--GYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARR 58
+P +V S+ +V G G+ + A LF +MP ++ SW+ ++ R + A
Sbjct: 87 LPSTDVCSYNTLVAALGRSPRGLAS-ARALFDRMPRRDHFSWSAIVSAHARHGQPRAALA 145
Query: 59 LFDMM---P---------------------------------------EKDVVAQTNMVL 76
++ M P + D V + +
Sbjct: 146 IYRRMLREPGSAGVDNEFTASSALAAATAARCARAGRELHCHVVRRGIDADAVVWSALAD 205
Query: 77 GYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVM----PEKNEVS 132
Y + GRVD+ R +FD MP ++V+SWT M+ Y + R +LF M + NE +
Sbjct: 206 MYAKCGRVDDARSVFDRMPVRDVVSWTAMVERYFDARRDGEGFRLFVRMLRSGIQPNEFT 265
Query: 133 WTAMLMGYTQ-----CGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQM 187
+ +L + G+ Q + K+ S A ++++ + G++ A VF M
Sbjct: 266 YAGVLRACAEFTSEKLGK-QVHGRMTKSRAGDSCFAESALVHMYSKYGDMGTAVRVFRGM 324
Query: 188 REKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGR 247
+ D +W+ MI Y + G E + F ++ + G R + + + VLS CA +D G
Sbjct: 325 PKLDLVSWTAMISGYAQNGQPDEALRYFDMLLRSGCRPDHVTFVGVLSACAHAGLVDKGL 384
Query: 248 QVHAQL---VRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASK-DIVMWNSIISG 302
+ + + D Y + +I + + G + + + + + K + +W S++ G
Sbjct: 385 SIFHSIKDEYGIEHTADHY--ACVIDLLSRSGLFERAEEMINTMSVKPNKFLWASLLGG 441
Score = 45.4 bits (106), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 48/229 (20%), Positives = 97/229 (42%), Gaps = 21/229 (9%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV----VSWTVMLGGFIRDSRIDDA 56
MP+ ++VSWTAM+ GY + G EA F + V++ +L +D
Sbjct: 324 MPKLDLVSWTAMISGYAQNGQPDEALRYFDMLLRSGCRPDHVTFVGVLSACAHAGLVDKG 383
Query: 57 RRLFDMMPEKDVVAQTN-----MVLGYCQDGRVDEGREIFDEMP-KKNVISWTTMISGYV 110
+F + ++ + T ++ + G + E+ + M K N W +++ G
Sbjct: 384 LSIFHSIKDEYGIEHTADHYACVIDLLSRSGLFERAEEMINTMSVKPNKFLWASLLGGCR 443
Query: 111 NNNRIDVAR----KLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSV--VAS 164
+ + +AR LFE+ PE N ++ + Y G + + M +K + + +
Sbjct: 444 IHKNVRLARWAAEALFEIEPE-NPATYVTLANIYASVGLFDEVENTRRIMELKGITKMPA 502
Query: 165 NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVID 213
+S I + G +V D++ + + ++ + K+Y + E V D
Sbjct: 503 SSWI----EVGTRMHVFLVGDKLHPQAEQVYALLKKLYVKMREEGYVAD 547
>gi|77553706|gb|ABA96502.1| SEC14 cytosolic factor, putative [Oryza sativa Japonica Group]
gi|125535837|gb|EAY82325.1| hypothetical protein OsI_37535 [Oryza sativa Indica Group]
gi|125578563|gb|EAZ19709.1| hypothetical protein OsJ_35285 [Oryza sativa Japonica Group]
Length = 630
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 209/543 (38%), Positives = 332/543 (61%), Gaps = 11/543 (2%)
Query: 67 DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVM- 125
D V ++ Y + G+ D R +FD M +++ISW TMI+GY +N A KLF M
Sbjct: 90 DTVTCNILINLYTKCGQNDCARRVFDAMSVRSIISWNTMIAGYTHNREDVEALKLFSRMH 149
Query: 126 ---PEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILG-----LGQNGEV 177
+ E + ++ L I + +L + +K + S+S + + +
Sbjct: 150 REGTQMTEFTLSSTLCACAAKYAIIECKQL-HTIAIKLALDSSSFVGTAFLDVYAKCNMI 208
Query: 178 QKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVC 237
+ A VF+ M EK TWS + + + G EV+ LF Q+EG+++ ++ S+LS C
Sbjct: 209 KDACWVFENMPEKTSVTWSSLFAGFVQNGLHEEVLCLFQSTQREGMQLTEFTVSSILSTC 268
Query: 238 ASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWN 297
ASLA + G QVHA +V+ F +++VA+ L+ +Y KCG++ K +F + K++V+WN
Sbjct: 269 ASLALIIEGTQVHAVIVKHGFHRNLFVATSLVDVYAKCGQIEKSYEVFADMEEKNVVLWN 328
Query: 298 SIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSK 357
++I+ ++++ +++ +F +M G+ P++VT + +LSACS+TG V+EGR F + S
Sbjct: 329 AMIASFSRHAHSWEAMILFEKMQQVGIFPNEVTYLSILSACSHTGLVEEGRHYFNLLLSD 388
Query: 358 YLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEV 417
EP HY+CMVD+LGR+G+ ++A KL++ MPFEP A +WGSLLG+ R H + LA +
Sbjct: 389 RTAEPNVLHYSCMVDVLGRSGKTDEAWKLLDKMPFEPTASMWGSLLGSSRIHKNIRLARI 448
Query: 418 AAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVH 477
AA++L +LEP+N G ++LLSN+YA+ G + +V RK +R K G SWIE + K+H
Sbjct: 449 AAEQLFRLEPENGGNHVLLSNVYAASGNWENVVVARKYLRDSGAKKEMGRSWIEAKGKIH 508
Query: 478 MFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLA 537
+F + HP + LE+I +R+ + ++ LHDV ++K L++HSEKLA
Sbjct: 509 VFVAGE-REHPGITDVYNKLEEIYHEMRKISHRANTQCDLHDVHADQKEELLKHHSEKLA 567
Query: 538 VAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCR 597
A+GL+ LP +PI + KNLR+CGDCHS +K++S + R++I+RD NRFHHFKDG CSC
Sbjct: 568 FAFGLISLPPNIPITIYKNLRICGDCHSFMKIVSCITERQVIVRDINRFHHFKDGSCSCG 627
Query: 598 DYW 600
D+W
Sbjct: 628 DFW 630
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 92/198 (46%), Gaps = 15/198 (7%)
Query: 208 ELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASV 267
E ++ID+FTL + +L +CA SL G+ H + D ++
Sbjct: 50 ERDLIDVFTLHE-------------LLQLCAKRRSLLVGKSCHGLAIHFGLVTDTVTCNI 96
Query: 268 LITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPD 327
LI +Y KCG+ + +FD + + I+ WN++I+GY ++LK+F M G
Sbjct: 97 LINLYTKCGQNDCARRVFDAMSVRSIISWNTMIAGYTHNREDVEALKLFSRMHREGTQMT 156
Query: 328 DVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLI 387
+ TL L AC+ + E +++ ++ K ++ + +D+ + ++DA +
Sbjct: 157 EFTLSSTLCACAAKYAIIECKQL-HTIAIKLALDSSSFVGTAFLDVYAKCNMIKDACWVF 215
Query: 388 EAMPFEPDAIIWGSLLGA 405
E MP E ++ W SL
Sbjct: 216 ENMP-EKTSVTWSSLFAG 232
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/291 (22%), Positives = 122/291 (41%), Gaps = 47/291 (16%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMP 64
+ V+ ++ Y + G A +F M ++++SW M+ G+ + +A +LF M
Sbjct: 90 DTVTCNILINLYTKCGQNDCARRVFDAMSVRSIISWNTMIAGYTHNREDVEALKLFSRMH 149
Query: 65 EKDV----VAQTNMVLGYCQDGRVDEGREIFDEMPKKNVIS----WTTMISGYVNNNRID 116
+ ++ + + E +++ K + S T + Y N I
Sbjct: 150 REGTQMTEFTLSSTLCACAAKYAIIECKQLHTIAIKLALDSSSFVGTAFLDVYAKCNMIK 209
Query: 117 VARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAM-------------PMKSVVA 163
A +FE MPEK V+W+++ G+ Q G ++ LF++ + S A
Sbjct: 210 DACWVFENMPEKTSVTWSSLFAGFVQNGLHEEVLCLFQSTQREGMQLTEFTVSSILSTCA 269
Query: 164 SNSMIL------------GLGQN--------------GEVQKARVVFDQMREKDDATWSG 197
S ++I+ G +N G+++K+ VF M EK+ W+
Sbjct: 270 SLALIIEGTQVHAVIVKHGFHRNLFVATSLVDVYAKCGQIEKSYEVFADMEEKNVVLWNA 329
Query: 198 MIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQ 248
MI + R + E + LF MQ+ G+ N + +S+LS C+ ++ GR
Sbjct: 330 MIASFSRHAHSWEAMILFEKMQQVGIFPNEVTYLSILSACSHTGLVEEGRH 380
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 106/219 (48%), Gaps = 22/219 (10%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLF-------WQMPE---KNVVSWTVMLGGFIRD 50
MPE+ V+W+++ G+V+ G+ E LF Q+ E +++S L I
Sbjct: 218 MPEKTSVTWSSLFAGFVQNGLHEEVLCLFQSTQREGMQLTEFTVSSILSTCASLALIIEG 277
Query: 51 SRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYV 110
+++ + +++ T++V Y + G++++ E+F +M +KNV+ W MI+ +
Sbjct: 278 TQVHAV--IVKHGFHRNLFVATSLVDVYAKCGQIEKSYEVFADMEEKNVVLWNAMIASFS 335
Query: 111 NNNRIDVARKLFEVMPE----KNEVSWTAMLMGYTQCGRIQDAWELFKAM-----PMKSV 161
+ A LFE M + NEV++ ++L + G +++ F + +V
Sbjct: 336 RHAHSWEAMILFEKMQQVGIFPNEVTYLSILSACSHTGLVEEGRHYFNLLLSDRTAEPNV 395
Query: 162 VASNSMILGLGQNGEVQKARVVFDQMR-EKDDATWSGMI 199
+ + M+ LG++G+ +A + D+M E + W ++
Sbjct: 396 LHYSCMVDVLGRSGKTDEAWKLLDKMPFEPTASMWGSLL 434
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 105/239 (43%), Gaps = 17/239 (7%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVV 69
TA + Y + MI +A +F MPEK V+W+ + GF+++ ++ LF + +
Sbjct: 196 TAFLDVYAKCNMIKDACWVFENMPEKTSVTWSSLFAGFVQNGLHEEVLCLFQSTQREGMQ 255
Query: 70 A---QTNMVLGYCQD-GRVDEGREIFDEMPK----KNVISWTTMISGYVNNNRIDVARKL 121
+ +L C + EG ++ + K +N+ T+++ Y +I+ + ++
Sbjct: 256 LTEFTVSSILSTCASLALIIEGTQVHAVIVKHGFHRNLFVATSLVDVYAKCGQIEKSYEV 315
Query: 122 FEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSV----VASNSMILGLGQNGEV 177
F M EKN V W AM+ +++ +A LF+ M + V S++ G V
Sbjct: 316 FADMEEKNVVLWNAMIASFSRHAHSWEAMILFEKMQQVGIFPNEVTYLSILSACSHTGLV 375
Query: 178 QKARVVF-----DQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLI 231
++ R F D+ E + +S M+ V R G E L M E + SL+
Sbjct: 376 EEGRHYFNLLLSDRTAEPNVLHYSCMVDVLGRSGKTDEAWKLLDKMPFEPTASMWGSLL 434
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 71/149 (47%), Gaps = 9/149 (6%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDM 62
RN+ T++V Y + G I ++ +F M EKNVV W M+ F R + +A LF+
Sbjct: 290 HRNLFVATSLVDVYAKCGQIEKSYEVFADMEEKNVVLWNAMIASFSRHAHSWEAMILFEK 349
Query: 63 MPEKDV----VAQTNMVLGYCQDGRVDEGREIF-----DEMPKKNVISWTTMISGYVNNN 113
M + + V +++ G V+EGR F D + NV+ ++ M+ +
Sbjct: 350 MQQVGIFPNEVTYLSILSACSHTGLVEEGRHYFNLLLSDRTAEPNVLHYSCMVDVLGRSG 409
Query: 114 RIDVARKLFEVMPEKNEVSWTAMLMGYTQ 142
+ D A KL + MP + S L+G ++
Sbjct: 410 KTDEAWKLLDKMPFEPTASMWGSLLGSSR 438
>gi|413942600|gb|AFW75249.1| hypothetical protein ZEAMMB73_388642 [Zea mays]
Length = 693
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 229/619 (36%), Positives = 352/619 (56%), Gaps = 21/619 (3%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEA--GTLFWQMPEKNVVSWTVMLGGFI---RDSRIDD 55
MP R+ V+W A+V GY G+ + A + Q E +V L + D+R
Sbjct: 77 MPSRDRVAWNAVVAGYARNGLPSSAMEAVVRMQGEEGGERPDSVTLVSVLPACADARALH 136
Query: 56 ARR---LFDMMPEKD--VVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYV 110
A R F + D V T ++ YC+ G V+ R +FD MP +N +SW MI GY
Sbjct: 137 ACREVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDCMPVRNSVSWNAMIDGYA 196
Query: 111 NNNRIDVARKLF-EVMPEKNEVSWTAMLMGYTQCGR------IQDAWELFKAMPMKSVVA 163
+N A LF ++ E +V+ ++L CG ++ EL + + S V+
Sbjct: 197 DNGNATEAMALFWRMVQEGVDVTDASVLAALQACGELGYLDEVRRVHELLVRVGLSSNVS 256
Query: 164 -SNSMILGLGQNGEVQKARVVFDQM-REKDDATWSGMIKVYERKGYELEVIDLFTLMQKE 221
+N++I + A VF+++ +K +W+ MI + + + LF MQ E
Sbjct: 257 VTNALITTYAKCKRADLAAQVFNELGNKKTRISWNAMILGFTQNECPEDAERLFARMQLE 316
Query: 222 GVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKG 281
VR + +L+SV+ A ++ R +H +R Q D DVYV + LI MY KCG +
Sbjct: 317 NVRPDSFTLVSVIPAVADISDPLQARWIHGYSIRHQLDQDVYVLTALIDMYSKCGRVSIA 376
Query: 282 KLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYT 341
+ +FD+ + ++ WN++I GY +G G+ ++++F EM +G +P++ T + VL+ACS+
Sbjct: 377 RRLFDSARDRHVITWNAMIHGYGSHGFGQAAVELFEEMKGTGSLPNETTFLSVLAACSHA 436
Query: 342 GKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGS 401
G V EG++ F SMK Y +EP EHY MVDLLGRAG++++A I+ MP EP ++G+
Sbjct: 437 GLVDEGQKYFASMKKDYGLEPGMEHYGTMVDLLGRAGKLDEAWSFIKNMPIEPGISVYGA 496
Query: 402 LLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNV 461
+LGAC+ H ++LAE +A+ + +L P+ ++LL+NIYA+ + DVA +R M K+ +
Sbjct: 497 MLGACKLHKNVELAEESAQIIFELGPEEGVYHVLLANIYANASMWKDVARVRTAMEKKGL 556
Query: 462 IKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVD 521
K PG S I+++ +VH F +H I L K+ +++ GY PD+ + HDV+
Sbjct: 557 QKTPGWSIIQLKNEVHTFYS-GSTNHQHAKDIYARLAKLIEEIKDMGYVPDTDSI-HDVE 614
Query: 522 EEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILR 581
++ K L HSEKLA+AYGL++ G I++ KNLRVC DCH+A KLIS + GREII+R
Sbjct: 615 DDVKAQLLNTHSEKLAIAYGLIRTAPGTTIQIKKNLRVCNDCHNATKLISLLTGREIIMR 674
Query: 582 DANRFHHFKDGLCSCRDYW 600
D RFHHFKDG CSC DYW
Sbjct: 675 DIQRFHHFKDGKCSCGDYW 693
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 90/175 (51%), Gaps = 2/175 (1%)
Query: 180 ARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKE--GVRVNFPSLISVLSVC 237
AR VFD+M +D W+ ++ Y R G ++ MQ E G R + +L+SVL C
Sbjct: 70 ARRVFDRMPSRDRVAWNAVVAGYARNGLPSSAMEAVVRMQGEEGGERPDSVTLVSVLPAC 129
Query: 238 ASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWN 297
A +L R+VHA +R D V V++ ++ Y KCG + + +FD ++ V WN
Sbjct: 130 ADARALHACREVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDCMPVRNSVSWN 189
Query: 298 SIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFE 352
++I GYA G +++ +F M GV D +++ L AC G + E R + E
Sbjct: 190 AMIDGYADNGNATEAMALFWRMVQEGVDVTDASVLAALQACGELGYLDEVRRVHE 244
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 88/177 (49%), Gaps = 4/177 (2%)
Query: 229 SLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNF 288
+ ++L +CA+ A L GR VHAQL + ++ L MY KC + +FD
Sbjct: 18 TFTALLKLCAARADLATGRAVHAQLEARGLASESIASTALANMYFKCRRPADARRVFDRM 77
Query: 289 ASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFS--SGVMPDDVTLVGVLSACSYTGKVKE 346
S+D V WN++++GYA+ GL +++ M G PD VTLV VL AC+ +
Sbjct: 78 PSRDRVAWNAVVAGYARNGLPSSAMEAVVRMQGEEGGERPDSVTLVSVLPACADARALHA 137
Query: 347 GREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
RE+ + + ++ ++D + G VE A + + MP +++ W +++
Sbjct: 138 CREV-HAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDCMPVR-NSVSWNAMI 192
>gi|326509211|dbj|BAJ91522.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 878
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 231/672 (34%), Positives = 359/672 (53%), Gaps = 76/672 (11%)
Query: 4 RNVVSWTAMVRGYVEEGMITEAGTLFWQMPEK------NVVSWTVMLGGFIRDSRIDDAR 57
R + A++ Y G++ +A +LF +VV+W M+ ++ R +A
Sbjct: 208 RERFPFNALLSMYARLGLVDDAQSLFRTTAAAFSPGGGDVVTWNTMISLLVQGGRCAEAV 267
Query: 58 R-LFDMMP---EKDVVAQTNMVLGYCQDGRVDEGREIF-----DEMPKKNVISWTTMISG 108
L+DM+ D V + + + + GRE+ D N + ++
Sbjct: 268 EVLYDMVSLGVRPDGVTFASALPACSRLEMLALGREMHAVVLKDADLAANSFVASALVDM 327
Query: 109 YVNNNRIDVARKLFEVMPEKNEV--SWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNS 166
Y N ++ AR++F+++PE + W AM+ GY Q G ++A ELF M ++ A +
Sbjct: 328 YAGNEKVASARRVFDMVPEPSRQLGMWNAMICGYAQAGMDEEALELFSRMEAEAGCAPSE 387
Query: 167 MIL--------------------------GLGQN--------------GEVQKARVVFDQ 186
+ G+ N GE+ AR +F
Sbjct: 388 TTMSGVLPACARSEGFAGKEAMHGYVVKRGMAGNRFVQNALMDMYARLGEMDVARRIFAM 447
Query: 187 MREKDDATWSGMIKVYERKGYELEVIDLFTLMQ------------KEG----VRVNFPSL 230
+ +D +W+ +I +G+ E L T MQ +EG N +L
Sbjct: 448 IDPRDVVSWNTLITGCVVQGHAAEAFQLVTEMQLPSPSPSSSSTTEEGEAHRCMPNNITL 507
Query: 231 ISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFAS 290
+++L CA+LA+ G+++H VR + D+ V S L+ MY KCG L + +FD
Sbjct: 508 MTLLPGCAALAAPARGKEIHGYAVRHALESDIAVGSALVDMYAKCGCLAASRAVFDRLPR 567
Query: 291 KDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSG-VMPDDVTLVGVLSACSYTGKVKEGRE 349
++++ WN +I Y +GLG++++ +F EM + G P++VT + L+ACS++G V G E
Sbjct: 568 RNVITWNVLIMAYGMHGLGDEAVALFDEMAAGGEATPNEVTFIAALAACSHSGLVDRGLE 627
Query: 350 IFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAM-PFEPDAIIWGSLLGACRT 408
+F M+ + V+P + +AC+VD+LGRAG++++A +I +M P E W SLLGACR
Sbjct: 628 LFHGMERDHGVKPTPDLHACVVDVLGRAGRLDEAYSIITSMEPGEQQVSAWSSLLGACRL 687
Query: 409 HMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCS 468
H ++L EVAA++L +LEP A Y+LL NIY++ G + +R MR++ V K PGCS
Sbjct: 688 HRNVELGEVAAERLFELEPGEASHYVLLCNIYSAAGMWDKSVAVRVRMRRQGVAKEPGCS 747
Query: 469 WIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHS 528
WIE++ +H F + SHP + ++ + +R GY PD+S VLHDVDE+EK
Sbjct: 748 WIELDGAIHRFMAGES-SHPASAEVHAHMDALWERMRREGYAPDTSCVLHDVDEDEKAAM 806
Query: 529 LRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHH 588
LRYHSEKLA+A+GL++ P G IRV KNLRVC DCH A K +SK++GR+I+LRD RFHH
Sbjct: 807 LRYHSEKLAIAFGLLRAPPGAAIRVAKNLRVCNDCHEAAKFMSKMVGRDIVLRDVRRFHH 866
Query: 589 FKDGLCSCRDYW 600
F+DG CSC DYW
Sbjct: 867 FRDGSCSCGDYW 878
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 115/285 (40%), Gaps = 40/285 (14%)
Query: 2 PERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKN--VVSWTVMLG---GFIRDSRIDDA 56
P R + W AM+ GY + GM EA LF +M + S T M G R
Sbjct: 347 PSRQLGMWNAMICGYAQAGMDEEALELFSRMEAEAGCAPSETTMSGVLPACARSEGFAGK 406
Query: 57 RRLFDMMPEKDVVA----QTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+ + ++ + Q ++ Y + G +D R IF + ++V+SW T+I+G V
Sbjct: 407 EAMHGYVVKRGMAGNRFVQNALMDMYARLGEMDVARRIFAMIDPRDVVSWNTLITGCVVQ 466
Query: 113 NRIDVARKLFEVMPE-----------------------KNEVSWTAMLMGYTQCGRIQDA 149
A + F+++ E N ++ +L G
Sbjct: 467 GH---AAEAFQLVTEMQLPSPSPSSSSTTEEGEAHRCMPNNITLMTLLPGCAALAAPARG 523
Query: 150 WELFKAM---PMKSVVASNSMILGL-GQNGEVQKARVVFDQMREKDDATWSGMIKVYERK 205
E+ ++S +A S ++ + + G + +R VFD++ ++ TW+ +I Y
Sbjct: 524 KEIHGYAVRHALESDIAVGSALVDMYAKCGCLAASRAVFDRLPRRNVITWNVLIMAYGMH 583
Query: 206 GYELEVIDLFTLMQKEG-VRVNFPSLISVLSVCASLASLDHGRQV 249
G E + LF M G N + I+ L+ C+ +D G ++
Sbjct: 584 GLGDEAVALFDEMAAGGEATPNEVTFIAALAACSHSGLVDRGLEL 628
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 64/144 (44%), Gaps = 20/144 (13%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPE-----KNVVSWTVMLGGFIRDSRIDD 55
+P RNV++W ++ Y G+ EA LF +M N V++ L +D
Sbjct: 565 LPRRNVITWNVLIMAYGMHGLGDEAVALFDEMAAGGEATPNEVTFIAALAACSHSGLVDR 624
Query: 56 ARRLFDMM-------PEKDVVAQTNMVLGYCQDGRVDEGREIFDEMP--KKNVISWTTMI 106
LF M P D+ A VLG + GR+DE I M ++ V +W++++
Sbjct: 625 GLELFHGMERDHGVKPTPDLHACVVDVLG--RAGRLDEAYSIITSMEPGEQQVSAWSSLL 682
Query: 107 SGYVNNNRIDV----ARKLFEVMP 126
+ +++ A +LFE+ P
Sbjct: 683 GACRLHRNVELGEVAAERLFELEP 706
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 67/147 (45%), Gaps = 12/147 (8%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDM 62
E ++ +A+V Y + G + + +F ++P +NV++W V++ + D+A LFD
Sbjct: 536 ESDIAVGSALVDMYAKCGCLAASRAVFDRLPRRNVITWNVLIMAYGMHGLGDEAVALFDE 595
Query: 63 MPEKDVVAQTNMV----LGYC-QDGRVDEGREIFDEMPKKNVISWTTMISGYV-----NN 112
M + L C G VD G E+F M + + + T + V
Sbjct: 596 MAAGGEATPNEVTFIAALAACSHSGLVDRGLELFHGMERDHGVKPTPDLHACVVDVLGRA 655
Query: 113 NRIDVARKLFEVM-PEKNEVS-WTAML 137
R+D A + M P + +VS W+++L
Sbjct: 656 GRLDEAYSIITSMEPGEQQVSAWSSLL 682
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 75/154 (48%), Gaps = 15/154 (9%)
Query: 264 VASVLITMYIKCGELVKGKLIFDNFAS--KDIVMWNSIISGYAQYGLGEKSLKVFHEMFS 321
V + L+T Y +CG+L +F A+ +D V +NS+IS + E++L +M +
Sbjct: 102 VGNALLTAYARCGDLDAALALFAATATELRDAVSYNSLISALCLFRQWERALDALRDMLA 161
Query: 322 SGVMP-DDVTLVGVLSACSY----TGKVKEGREIFE-SMKSKYLVEPKTEH-YACMVDLL 374
G TLV VL ACS+ G+ + GRE ++K +L E + + ++ +
Sbjct: 162 EGRHDVSSFTLVSVLLACSHLPGDDGR-RLGREAHAFALKRGFLDEGRERFPFNALLSMY 220
Query: 375 GRAGQVEDAMKLIE--AMPFEP---DAIIWGSLL 403
R G V+DA L A F P D + W +++
Sbjct: 221 ARLGLVDDAQSLFRTTAAAFSPGGGDVVTWNTMI 254
>gi|297806459|ref|XP_002871113.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297316950|gb|EFH47372.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 637
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 226/548 (41%), Positives = 336/548 (61%), Gaps = 11/548 (2%)
Query: 62 MMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKL 121
M + DV ++ Y + G V+ R++FD M +++++SW TMI Y N A +
Sbjct: 92 MELQGDVTLSNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDI 151
Query: 122 F-EVMPEKNEVSWTAMLMGYTQCGRIQDAWELFK--AMPMKSVVASN----SMILGL-GQ 173
F E+ E + S + + CG DA E K + MK+ + N + +L L +
Sbjct: 152 FWEMRNEGFKFSEFTISSVLSACGANCDALECKKLHCLSMKTSLDLNLYVGTALLDLYAK 211
Query: 174 NGEVQKARVVFDQMREKDDATWSGMIKVY-ERKGYELEVIDLFTLMQKEGVRVNFPSLIS 232
G + A VF+ M++K TWS M+ Y + K YE E + L+ Q+ + N +L S
Sbjct: 212 CGMINDAVQVFESMQDKSSVTWSSMVAGYVQSKNYE-EALLLYRRAQRMSLEQNQFTLSS 270
Query: 233 VLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKD 292
V+ C++LA+L G+Q+HA + + F +V+VAS + MY KCG L + +IF K+
Sbjct: 271 VICACSNLAALIEGKQMHAVIRKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKN 330
Query: 293 IVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFE 352
I +WN+IISG+A++ ++ + +F +M G+ P++VT +LS C +TG V+EGR F+
Sbjct: 331 IELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFK 390
Query: 353 SMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKL 412
M++ Y + P HY+CMVD+LGRAG + +A +LI+++PFEP A IWGSLL +CR L
Sbjct: 391 LMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFEPTASIWGSLLASCRVCKNL 450
Query: 413 DLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEV 472
+LAEVAAKKL +LEP+NAG ++LLSNIYA+ ++ ++A+ RK +R +V K G SWI++
Sbjct: 451 ELAEVAAKKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLLRDCDVKKVRGQSWIDI 510
Query: 473 EKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYH 532
+ KVH+F + SHP I ML+ + LR+ GY P LHDV+ +K L H
Sbjct: 511 KDKVHIFRVGE-SSHPRIREICTMLDNLVIELRKFGYKPSVEHELHDVEIGKKEELLMQH 569
Query: 533 SEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDG 592
SEKLA+ +GL+ LPEG +R+MKNLR+C DCH +K S R II+RDANRFHHF DG
Sbjct: 570 SEKLALVFGLMCLPEGSTVRIMKNLRICVDCHEFMKAASMATRRFIIVRDANRFHHFSDG 629
Query: 593 LCSCRDYW 600
CSC ++W
Sbjct: 630 HCSCGEFW 637
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 129/265 (48%), Gaps = 18/265 (6%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKN------VVSWTVMLGGFIRDSRID 54
M ER++VSW M+ Y M +EA +FW+M + +S + G D+
Sbjct: 124 MLERSLVSWNTMIGLYTRNRMESEALDIFWEMRNEGFKFSEFTISSVLSACGANCDALEC 183
Query: 55 DARRLFDMMPEKD--VVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
M D + T ++ Y + G +++ ++F+ M K+ ++W++M++GYV +
Sbjct: 184 KKLHCLSMKTSLDLNLYVGTALLDLYAKCGMINDAVQVFESMQDKSSVTWSSMVAGYVQS 243
Query: 113 NRIDVA----RKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMI 168
+ A R+ + E+N+ + ++++ + + + ++ A+ KS SN +
Sbjct: 244 KNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQM-HAVIRKSGFGSNVFV 302
Query: 169 LG-----LGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGV 223
+ G ++++ ++F +++EK+ W+ +I + + EV+ LF MQ++G+
Sbjct: 303 ASSAVDMYAKCGSLRESYIIFSEVQEKNIELWNTIISGFAKHARPKEVMILFEKMQQDGM 362
Query: 224 RVNFPSLISVLSVCASLASLDHGRQ 248
N + S+LSVC ++ GR+
Sbjct: 363 HPNEVTFSSLLSVCGHTGLVEEGRR 387
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 90/181 (49%), Gaps = 2/181 (1%)
Query: 225 VNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLI 284
V I +L +CA ++ + H + +R + DV +++VLI Y KCG + + +
Sbjct: 61 VQASDFIEILQLCARNGAVMEAKACHGKTMRMELQGDVTLSNVLINAYSKCGFVELARQV 120
Query: 285 FDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKV 344
FD + +V WN++I Y + + ++L +F EM + G + T+ VLSAC
Sbjct: 121 FDGMLERSLVSWNTMIGLYTRNRMESEALDIFWEMRNEGFKFSEFTISSVLSACGANCDA 180
Query: 345 KEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLG 404
E +++ + K ++ ++DL + G + DA+++ E+M + ++ W S++
Sbjct: 181 LECKKL-HCLSMKTSLDLNLYVGTALLDLYAKCGMINDAVQVFESMQ-DKSSVTWSSMVA 238
Query: 405 A 405
Sbjct: 239 G 239
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 114/253 (45%), Gaps = 17/253 (6%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDA----RRLF 60
N+ TA++ Y + GMI +A +F M +K+ V+W+ M+ G+++ ++A RR
Sbjct: 198 NLYVGTALLDLYAKCGMINDAVQVFESMQDKSSVTWSSMVAGYVQSKNYEEALLLYRRAQ 257
Query: 61 DMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPK----KNVISWTTMISGYVNNNRID 116
M E++ ++++ + EG+++ + K NV ++ + Y +
Sbjct: 258 RMSLEQNQFTLSSVICACSNLAALIEGKQMHAVIRKSGFGSNVFVASSAVDMYAKCGSLR 317
Query: 117 VARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSV----VASNSMILGLG 172
+ +F + EKN W ++ G+ + R ++ LF+ M + V +S++ G
Sbjct: 318 ESYIIFSEVQEKNIELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCG 377
Query: 173 QNGEVQKARVVFDQMREK-----DDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNF 227
G V++ R F MR + +S M+ + R G E +L + E +
Sbjct: 378 HTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFEPTASIW 437
Query: 228 PSLISVLSVCASL 240
SL++ VC +L
Sbjct: 438 GSLLASCRVCKNL 450
>gi|357475445|ref|XP_003608008.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355509063|gb|AES90205.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1183
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 230/643 (35%), Positives = 351/643 (54%), Gaps = 49/643 (7%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMM- 63
N +++ Y + G + A LF ++ E +VVSW M+ G + + + +F M
Sbjct: 504 NTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQML 563
Query: 64 ---PEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPK----KNVISWTTMISGYVNNNRID 116
E D+ ++++ + G + GR + K + V+ T++ Y ++
Sbjct: 564 ILGVEVDLTTLVSVLVAWANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLN 623
Query: 117 VARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSV--------------- 161
A ++F M + VSWT+ + Y + G DA LF M K V
Sbjct: 624 GATEVFVKMGDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACA 683
Query: 162 ----------VASNSMILGLGQN--------------GEVQKARVVFDQMREKDDATWSG 197
V S + G+G N G V++AR+VF ++ KD +W+
Sbjct: 684 CSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNT 743
Query: 198 MIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQ 257
MI Y + E ++LF MQK+ + + ++ VL CA LA+LD GR++H ++R
Sbjct: 744 MIGGYSQNSLPNEALELFLDMQKQ-FKPDDITMACVLPACAGLAALDKGREIHGHILRRG 802
Query: 258 FDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFH 317
+ D++VA L+ MY KCG LV +L+FD KD++ W +I+GY +G G +++ F+
Sbjct: 803 YFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHGFGNEAISTFN 862
Query: 318 EMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRA 377
EM +G+ PD+ + +L+ACS++G + EG + F SM+++ VEPK EHYAC+VDLL R
Sbjct: 863 EMRIAGIEPDESSFSVILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHYACVVDLLARM 922
Query: 378 GQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLS 437
G + A K IE+MP +PD IWG LL CR H + LAE A+ + +LEP N Y++L+
Sbjct: 923 GNLSKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEKVAEHIFELEPDNTRYYVVLA 982
Query: 438 NIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRML 497
N+YA ++ +V +LRK M+KR + PGCSWIEV K ++F + HP+ I +L
Sbjct: 983 NVYAEAEKWEEVKKLRKRMQKRGFKQNPGCSWIEVGGKFNIFVAGN-SKHPQAKRIDVLL 1041
Query: 498 EKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNL 557
K+ ++ Y +VL + D+ EK HSEK A+A+G++ LP G +RV KN
Sbjct: 1042 RKLTMQMQNEDYFSMFRYVLINEDDMEKEMIQCGHSEKSAMAFGILNLPPGRTVRVSKNQ 1101
Query: 558 RVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
RVCGDCH K +SK REI+LRD+NRFHHFKDGLCSCRD +
Sbjct: 1102 RVCGDCHEMGKFMSKTTKREIVLRDSNRFHHFKDGLCSCRDAF 1144
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 123/504 (24%), Positives = 232/504 (46%), Gaps = 57/504 (11%)
Query: 12 MVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQ 71
+V YV G + + +F ++ V W +++ + + ++ LF M + VV
Sbjct: 410 LVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGN 469
Query: 72 ---------------------------------------TNMVLGYCQDGRVDEGREIFD 92
+++ Y + G V+ +FD
Sbjct: 470 CYTFTCVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFD 529
Query: 93 EMPKKNVISWTTMISGYVNN----NRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQD 148
E+ + +V+SW +MI+G V N N +++ ++ + E + + ++L+ + G +
Sbjct: 530 ELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVAWANIGNLSL 589
Query: 149 AWEL----FKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYER 204
L KA + VV SN+++ + G + A VF +M + +W+ I Y R
Sbjct: 590 GRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSTIAAYVR 649
Query: 205 KGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYV 264
+G + I LF MQ +GVR + ++ S++ CA +SLD GR VH+ +++ ++ V
Sbjct: 650 EGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPV 709
Query: 265 ASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGV 324
+ LI MY KCG + + +L+F KDIV WN++I GY+Q L ++L++F +M
Sbjct: 710 TNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNSLPNEALELFLDM-QKQF 768
Query: 325 MPDDVTLVGVLSACSYTGKVKEGREIF-ESMKSKYLVEPKTEHYAC-MVDLLGRAGQVED 382
PDD+T+ VL AC+ + +GREI ++ Y + H AC +VD+ + G +
Sbjct: 769 KPDDITMACVLPACAGLAALDKGREIHGHILRRGYFSDL---HVACALVDMYAKCGLLVL 825
Query: 383 AMKLIEAMPFEPDAIIWGSLLGACRTH--MKLDLAEVAAKKLLQLEPKNAGPYILLSNIY 440
A L + +P + D I W ++ H ++ ++ +EP + ++L N
Sbjct: 826 AQLLFDMIP-KKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSVIL-NAC 883
Query: 441 ASQGRFHDVAELRKNMRKRNVIKP 464
+ G ++ + +MR ++P
Sbjct: 884 SHSGLLNEGWKFFNSMRNECGVEP 907
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/365 (25%), Positives = 173/365 (47%), Gaps = 14/365 (3%)
Query: 53 IDDARRLFDMMPEK----DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISG 108
++D +R+ ++ D +V Y G + +GR+IFD++ V W ++S
Sbjct: 385 LEDGKRVHSVIISNGISIDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSE 444
Query: 109 YVNNNRIDVARKLFEVMPE----KNEVSWTAMLMGYTQCGRIQDAWEL----FKAMPMKS 160
Y + LF+ M + N ++T +L + G++++ + K +
Sbjct: 445 YAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVLKLGFGSN 504
Query: 161 VVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQK 220
NS+I + G V+ A +FD++ E D +W+ MI G+ +++F M
Sbjct: 505 TAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLI 564
Query: 221 EGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVK 280
GV V+ +L+SVL A++ +L GR +H V+ F +V ++ L+ MY KCG L
Sbjct: 565 LGVEVDLTTLVSVLVAWANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNG 624
Query: 281 GKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSY 340
+F IV W S I+ Y + GL ++ +F EM S GV PD T+ ++ AC+
Sbjct: 625 ATEVFVKMGDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACAC 684
Query: 341 TGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWG 400
+ + +GR++ S K + ++++ + G VE+A + +P + D + W
Sbjct: 685 SSSLDKGRDV-HSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVK-DIVSWN 742
Query: 401 SLLGA 405
+++G
Sbjct: 743 TMIGG 747
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 97/190 (51%), Gaps = 2/190 (1%)
Query: 217 LMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCG 276
L + + + S SVL +CA SL+ G++VH+ ++ +D + + L+ MY+ CG
Sbjct: 359 LTKSKSYELGLNSYCSVLQLCAEKKSLEDGKRVHSVIISNGISIDEALGAKLVFMYVNCG 418
Query: 277 ELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLS 336
+LV+G+ IFD + + +WN ++S YA+ G +S+ +F +M GV+ + T VL
Sbjct: 419 DLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLK 478
Query: 337 ACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDA 396
+ GKVKE + + K T ++ + G VE A L + + EPD
Sbjct: 479 CFAALGKVKECKRV-HGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELS-EPDV 536
Query: 397 IIWGSLLGAC 406
+ W S++ C
Sbjct: 537 VSWNSMINGC 546
>gi|449439005|ref|XP_004137278.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Cucumis sativus]
gi|449476583|ref|XP_004154777.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Cucumis sativus]
Length = 816
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 219/616 (35%), Positives = 347/616 (56%), Gaps = 21/616 (3%)
Query: 4 RNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDS-RIDDARR---- 58
R++ +W AM+ G+ G + EA +F +M K+V +V + + ++DD
Sbjct: 203 RDIGTWNAMISGFYLNGKVAEALEVFDEMRFKSVSMDSVTISSLLPICVQLDDIISGVLI 262
Query: 59 ---LFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRI 115
+ E D+ ++ Y + G + IF++M ++++SW ++++ + N +
Sbjct: 263 HVYAIKLGLEFDLFVCNALINMYAKFGELRSAETIFNQMKVRDIVSWNSLLAAFEQNKKP 322
Query: 116 DVARKLFEVMPEKNEV---------SWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNS 166
+A ++ M V + A +G R + + + + N+
Sbjct: 323 VIALGVYNKMHSIGVVPDLLTLVSLASVAAELGNFLSSRSIHGFVTRRCWFLHDIALGNA 382
Query: 167 MILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQK-EGVRV 225
+I + G + AR VF+ + KD +W+ +I Y + G E ID+++ M+ G
Sbjct: 383 IIDMYAKLGFIDSARKVFEGLPVKDVISWNSLITGYSQNGLANEAIDVYSSMRYYSGAVP 442
Query: 226 NFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIF 285
N + +S+L+ + L +L G + H QL++ D++V++ L+ MY KCG+L +F
Sbjct: 443 NQGTWVSILTAHSQLGALKQGMKAHGQLIKNFLYFDIFVSTCLVDMYGKCGKLADALSLF 502
Query: 286 DNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVK 345
+ V WN+IIS + +G G K++K+F EM S GV PD +T V +LSACS++G V
Sbjct: 503 YEVPHQSSVSWNAIISCHGLHGYGLKAVKLFKEMQSEGVKPDHITFVSLLSACSHSGLVD 562
Query: 346 EGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
EG+ F+ M+ Y + P +HY CMVDL GRAG +E A ++ MP PD +WG+LLGA
Sbjct: 563 EGQWCFQLMQETYGIRPSLKHYGCMVDLFGRAGHLEKAFNFVKNMPVRPDVSVWGALLGA 622
Query: 406 CRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPP 465
CR H ++L + LL++E +N G Y+LLSNIYA G + V E+R R R + K P
Sbjct: 623 CRIHENVELVRTVSDHLLKVESENVGYYVLLSNIYAKLGHWEGVDEVRSLARDRGLKKTP 682
Query: 466 GCSWIEVEKKVHMF-TGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEE 524
G S IEV+KK+ +F TG +HP+ I L + ++ GY PD +FVL DV+++E
Sbjct: 683 GWSSIEVDKKIDVFYTGNQ--THPKCEEIYSELRNLTAKMKSIGYVPDYNFVLQDVEDDE 740
Query: 525 KVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDAN 584
K + L HSE+LA+A+G++ P +++ KNLRVCGDCH+A K ISK+ REII+RD+N
Sbjct: 741 KENILTSHSERLAMAFGIISTPPKTTLQIFKNLRVCGDCHNATKFISKITEREIIVRDSN 800
Query: 585 RFHHFKDGLCSCRDYW 600
RFHHFKDG+CSC DYW
Sbjct: 801 RFHHFKDGVCSCGDYW 816
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 111/445 (24%), Positives = 216/445 (48%), Gaps = 25/445 (5%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVV-SWTVMLGGFIRD-SRIDDARR 58
+ ++V +W +M+ Y G A F + + + S IR +DD R+
Sbjct: 101 IQTKDVYTWNSMISAYARIGHFHAAVDCFNEFLSTSFLQSDHYTFPPVIRACGNLDDGRK 160
Query: 59 L----FDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNR 114
+ + E DV + + Y + G V +FD M +++ +W MISG+ N +
Sbjct: 161 VHCLVLKLGFECDVYIAASFIHFYSRFGFVSLACNLFDNMMIRDIGTWNAMISGFYLNGK 220
Query: 115 IDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQD--AWELFKAMPMK-----SVVA 163
+ A ++F+ M K + V+ +++L C ++ D + L +K +
Sbjct: 221 VAEALEVFDEMRFKSVSMDSVTISSLL---PICVQLDDIISGVLIHVYAIKLGLEFDLFV 277
Query: 164 SNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGV 223
N++I + GE++ A +F+QM+ +D +W+ ++ +E+ + + ++ M GV
Sbjct: 278 CNALINMYAKFGELRSAETIFNQMKVRDIVSWNSLLAAFEQNKKPVIALGVYNKMHSIGV 337
Query: 224 RVNFPSLISVLSVCASLASLDHGRQVHAQLV-RCQFDVDVYVASVLITMYIKCGELVKGK 282
+ +L+S+ SV A L + R +H + RC F D+ + + +I MY K G + +
Sbjct: 338 VPDLLTLVSLASVAAELGNFLSSRSIHGFVTRRCWFLHDIALGNAIIDMYAKLGFIDSAR 397
Query: 283 LIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEM-FSSGVMPDDVTLVGVLSACSYT 341
+F+ KD++ WNS+I+GY+Q GL +++ V+ M + SG +P+ T V +L+A S
Sbjct: 398 KVFEGLPVKDVISWNSLITGYSQNGLANEAIDVYSSMRYYSGAVPNQGTWVSILTAHSQL 457
Query: 342 GKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGS 401
G +K+G + + +L C+VD+ G+ G++ DA+ L +P + ++ W +
Sbjct: 458 GALKQGMKAHGQLIKNFLYFDIFVS-TCLVDMYGKCGKLADALSLFYEVPHQ-SSVSWNA 515
Query: 402 LLGACRTHMKLDLAEVAAKKLLQLE 426
++ +C L V K +Q E
Sbjct: 516 II-SCHGLHGYGLKAVKLFKEMQSE 539
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 99/376 (26%), Positives = 178/376 (47%), Gaps = 29/376 (7%)
Query: 47 FIRDSRIDDARRLFDMM----PEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISW 102
F+ +++ A++L ++ + + ++ Y G + R FD++ K+V +W
Sbjct: 50 FLYCTKVHLAKQLHALLVVSGKTQSIFLSAKLINRYAFLGDIPHARLTFDQIQTKDVYTW 109
Query: 103 TTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMG--YT------QCGRIQDAWELFK 154
+MIS Y A F NE T+ L YT CG + D ++
Sbjct: 110 NSMISAYARIGHFHAAVDCF------NEFLSTSFLQSDHYTFPPVIRACGNLDDGRKV-H 162
Query: 155 AMPMK-----SVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYEL 209
+ +K V + S I + G V A +FD M +D TW+ MI + G
Sbjct: 163 CLVLKLGFECDVYIAASFIHFYSRFGFVSLACNLFDNMMIRDIGTWNAMISGFYLNGKVA 222
Query: 210 EVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLI 269
E +++F M+ + V ++ ++ S+L +C L + G +H ++ + D++V + LI
Sbjct: 223 EALEVFDEMRFKSVSMDSVTISSLLPICVQLDDIISGVLIHVYAIKLGLEFDLFVCNALI 282
Query: 270 TMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDV 329
MY K GEL + IF+ +DIV WNS+++ + Q +L V+++M S GV+PD +
Sbjct: 283 NMYAKFGELRSAETIFNQMKVRDIVSWNSLLAAFEQNKKPVIALGVYNKMHSIGVVPDLL 342
Query: 330 TLVGVLSACSYTGKVKEGREI--FESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLI 387
TLV + S + G R I F + + +L + + ++D+ + G ++ A K+
Sbjct: 343 TLVSLASVAAELGNFLSSRSIHGFVTRRCWFLHDIALGN--AIIDMYAKLGFIDSARKVF 400
Query: 388 EAMPFEPDAIIWGSLL 403
E +P + D I W SL+
Sbjct: 401 EGLPVK-DVISWNSLI 415
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/218 (19%), Positives = 96/218 (44%), Gaps = 19/218 (8%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM-----PEKNVVSWTVMLGGFIRDSRIDD 55
+P ++V+SW +++ GY + G+ EA ++ M N +W +L + +
Sbjct: 403 LPVKDVISWNSLITGYSQNGLANEAIDVYSSMRYYSGAVPNQGTWVSILTAHSQLGALKQ 462
Query: 56 ARRLFDMMPEK----DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVN 111
+ + + D+ T +V Y + G++ + +F E+P ++ +SW +IS +
Sbjct: 463 GMKAHGQLIKNFLYFDIFVSTCLVDMYGKCGKLADALSLFYEVPHQSSVSWNAIISCHGL 522
Query: 112 NNRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAMP-----MKSVV 162
+ A KLF+ M + + +++ ++L + G + + F+ M S+
Sbjct: 523 HGYGLKAVKLFKEMQSEGVKPDHITFVSLLSACSHSGLVDEGQWCFQLMQETYGIRPSLK 582
Query: 163 ASNSMILGLGQNGEVQKARVVFDQMREKDDAT-WSGMI 199
M+ G+ G ++KA M + D + W ++
Sbjct: 583 HYGCMVDLFGRAGHLEKAFNFVKNMPVRPDVSVWGALL 620
>gi|414591609|tpg|DAA42180.1| TPA: hypothetical protein ZEAMMB73_073969 [Zea mays]
Length = 696
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 229/621 (36%), Positives = 349/621 (56%), Gaps = 26/621 (4%)
Query: 2 PERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIR-----------D 50
P VVS+TA + G + +A + F M + +
Sbjct: 80 PSPTVVSYTAFISGAAQHARPLQALSAFAAMLRLGLRPNDFTFPSAFKAAASAPPRSAAG 139
Query: 51 SRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYV 110
+++ F +P+ V+ + + Y + G + R +FDEMP +NV++W +++ V
Sbjct: 140 TQLHALALRFGYLPDDAFVSCAALDM-YFKTGCLALARRLFDEMPNRNVVAWNAVMTNAV 198
Query: 111 NNNR-IDVARKLFEV-----MPEKNEVSWTAMLMGYTQCGRIQDAWELF----KAMPMKS 160
+ R ++ F + MP N VS A + + + K K
Sbjct: 199 LDGRPLETVEAYFGLRGAGGMP--NVVSVCAFFNACAGMTNLSLGEQFYGFVAKCGFGKD 256
Query: 161 VVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQK 220
V SNS++ G+ V KAR VFD M +++ +W M+ Y + G E E ++ ++
Sbjct: 257 VSVSNSVVDFYGKCRCVGKARAVFDGMGVRNNVSWCSMVVAYAQNGAEEEAFFVYLGARR 316
Query: 221 EGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVK 280
G + SVL+ CA L LD GR +HA VR D +++VAS L+ MY KCG +
Sbjct: 317 AGEEPTDFMVSSVLTTCAGLLGLDLGRALHAVAVRSCIDSNIFVASALVDMYGKCGGIED 376
Query: 281 GKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMF-SSGVMPDDVTLVGVLSACS 339
+ +F +++V WN++I GYA G +L VF +M P+ +TLV VL+ACS
Sbjct: 377 AEQVFFEMPQRNLVTWNAMIGGYAHIGDAHNALSVFDKMIMGQETAPNYITLVNVLTACS 436
Query: 340 YTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIW 399
G KEG E+F++MK ++ +EP+ EHYAC+VDLL RAG E A K+I+ MP P +W
Sbjct: 437 RGGLTKEGYELFQTMKWRFGIEPRIEHYACVVDLLCRAGMEERAYKIIQGMPMRPSISVW 496
Query: 400 GSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKR 459
G+LLG C+ H K +L +AA+KL +L+P+++G ++LLSN+ AS GR+ + ++RK M+
Sbjct: 497 GALLGGCKMHGKTELGRIAAEKLFELDPQDSGNHVLLSNMLASAGRWAEATDVRKEMKNV 556
Query: 460 NVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHD 519
+ K PG SWI + VH+F +D +H + I +L K+ G ++ AGY PD+ + L+D
Sbjct: 557 GIKKDPGRSWITWKNVVHVFQAKD-TTHDMNREIQALLAKLKGQMQAAGYMPDTQYALYD 615
Query: 520 VDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREII 579
++EEEK + HSEKLA+A+GL+ +P G+PIR+MKNLR+C DCH A K IS + GREII
Sbjct: 616 LEEEEKESEVFQHSEKLALAFGLICIPPGIPIRIMKNLRICVDCHRAFKFISGIAGREII 675
Query: 580 LRDANRFHHFKDGLCSCRDYW 600
+RD N FHHFK+ CSC+DYW
Sbjct: 676 VRDNNMFHHFKNYECSCKDYW 696
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 108/273 (39%), Gaps = 56/273 (20%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQ------MPEKNVVSWTVMLGGFIRDSRID 54
MP RNVV+W A++ V +G E ++ MP NVVS + +
Sbjct: 182 MPNRNVVAWNAVMTNAVLDGRPLETVEAYFGLRGAGGMP--NVVSVCAFFNACAGMTNLS 239
Query: 55 DARRLFDMMPE----KDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYV 110
+ + + + KDV ++V Y + V + R +FD M +N +SW +M+ Y
Sbjct: 240 LGEQFYGFVAKCGFGKDVSVSNSVVDFYGKCRCVGKARAVFDGMGVRNNVSWCSMVVAYA 299
Query: 111 NNNR-----------------------------------IDVARKLFEVMP----EKNEV 131
N +D+ R L V + N
Sbjct: 300 QNGAEEEAFFVYLGARRAGEEPTDFMVSSVLTTCAGLLGLDLGRALHAVAVRSCIDSNIF 359
Query: 132 SWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQM---- 187
+A++ Y +CG I+DA ++F MP +++V N+MI G G+ A VFD+M
Sbjct: 360 VASALVDMYGKCGGIEDAEQVFFEMPQRNLVTWNAMIGGYAHIGDAHNALSVFDKMIMGQ 419
Query: 188 -REKDDATWSGMIKVYERKGYELEVIDLFTLMQ 219
+ T ++ R G E +LF M+
Sbjct: 420 ETAPNYITLVNVLTACSRGGLTKEGYELFQTMK 452
>gi|357124213|ref|XP_003563798.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 637
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 216/543 (39%), Positives = 322/543 (59%), Gaps = 10/543 (1%)
Query: 67 DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMP 126
D V T +V Y G V R +FD MPK+NV W +I Y + +VA +L+ M
Sbjct: 96 DTVLATKLVDLYAACGLVGHARRLFDGMPKRNVFLWNVLIRAYARDGPHEVAIQLYRGMV 155
Query: 127 ----EKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGL----GQNGEVQ 178
E + ++ L ++ E+ + + + GL + G V
Sbjct: 156 DYGVEPDNFTYPLALKACAALLDLETGREVHERVLGTHWGEDMFVCAGLVDMYAKCGCVD 215
Query: 179 KARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCA 238
AR VFD++R +D W+ MI Y + G +E + L M GV +L+S +S A
Sbjct: 216 DARAVFDRIRVRDSVVWNSMIAAYGQNGRPMEALSLCRDMAANGVGPTIATLVSTISAAA 275
Query: 239 SLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNS 298
A+L GR++H R FD + + L+ MY K G + +++F+ +++V WN+
Sbjct: 276 DAAALPRGRELHGFGWRRGFDRQDKLKTSLVDMYAKSGWVQVARVLFEQLMKRELVSWNA 335
Query: 299 IISGYAQYGLGEKSLKVFHEM-FSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSK 357
+I GY +G +++LK+F++M + V PD++T VGVLSAC++ G VKE +E F M
Sbjct: 336 MICGYGMHGHFDEALKLFNKMRVEAQVTPDNITFVGVLSACNHGGMVKEAKEFFGLMVDV 395
Query: 358 YLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEV 417
Y ++P +H+ C+VD+LG AG+ E+A LI+ MP +PD+ IWG+LL C+ H ++L E+
Sbjct: 396 YSIKPTVQHFTCLVDVLGHAGRFEEAYDLIKGMPMQPDSGIWGALLNGCKIHKNVELGEL 455
Query: 418 AAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVH 477
A +KL++LEP++AG Y+LLSNIYA G++ A +RK M R + K GCSWIE++ K H
Sbjct: 456 ALQKLIELEPEDAGNYVLLSNIYAQSGKWEKAARVRKLMTNRGLKKIIGCSWIELKGKTH 515
Query: 478 MFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLA 537
F D SHP I LE++ GL+ +AGY PD+ V HDV ++EK + +R HSE+LA
Sbjct: 516 GFLVGD-ASHPRSAEIYEELERLEGLMSDAGYMPDTMPVFHDVGDDEKRNMMRSHSERLA 574
Query: 538 VAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCR 597
+A+GL+ P G + V KNLRVC DCH IKLIS+++ REII+RD NR+HHF +G CSC+
Sbjct: 575 IAFGLISTPSGTKLLVTKNLRVCEDCHVVIKLISQIVQREIIIRDVNRYHHFVNGECSCK 634
Query: 598 DYW 600
DYW
Sbjct: 635 DYW 637
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 96/182 (52%), Gaps = 6/182 (3%)
Query: 226 NFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIF 285
++ SVL C + SL GRQ+H +L+ D +A+ L+ +Y CG + + +F
Sbjct: 61 SYHHYTSVLQSCVASRSLGTGRQLHGRLLVSGLGPDTVLATKLVDLYAACGLVGHARRLF 120
Query: 286 DNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVK 345
D +++ +WN +I YA+ G E +++++ M GV PD+ T L AC+ ++
Sbjct: 121 DGMPKRNVFLWNVLIRAYARDGPHEVAIQLYRGMVDYGVEPDNFTYPLALKACAALLDLE 180
Query: 346 EGREIFESMKSKYLVEPKTEHYAC--MVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
GRE+ E + + E + + C +VD+ + G V+DA + + + D+++W S++
Sbjct: 181 TGREVHERVLGTHWGE---DMFVCAGLVDMYAKCGCVDDARAVFDRIRVR-DSVVWNSMI 236
Query: 404 GA 405
A
Sbjct: 237 AA 238
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 126/307 (41%), Gaps = 54/307 (17%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF---- 60
+ V T +V Y G++ A LF MP++NV W V++ + RD + A +L+
Sbjct: 96 DTVLATKLVDLYAACGLVGHARRLFDGMPKRNVFLWNVLIRAYARDGPHEVAIQLYRGMV 155
Query: 61 DMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMP----KKNVISWTTMISGYVNNNRID 116
D E D + ++ GRE+ + + +++ ++ Y +D
Sbjct: 156 DYGVEPDNFTYPLALKACAALLDLETGREVHERVLGTHWGEDMFVCAGLVDMYAKCGCVD 215
Query: 117 VARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMIL------- 169
AR +F+ + ++ V W +M+ Y Q GR +A L + M V + + ++
Sbjct: 216 DARAVFDRIRVRDSVVWNSMIAAYGQNGRPMEALSLCRDMAANGVGPTIATLVSTISAAA 275
Query: 170 ------------GLG--------------------QNGEVQKARVVFDQMREKDDATWSG 197
G G ++G VQ ARV+F+Q+ +++ +W+
Sbjct: 276 DAAALPRGRELHGFGWRRGFDRQDKLKTSLVDMYAKSGWVQVARVLFEQLMKRELVSWNA 335
Query: 198 MIKVYERKGYELEVIDLFTLMQKEG-VRVNFPSLISVLSVCASLASLDHGRQVHAQLVRC 256
MI Y G+ E + LF M+ E V + + + VLS C +HG V
Sbjct: 336 MICGYGMHGHFDEALKLFNKMRVEAQVTPDNITFVGVLSAC------NHGGMVKEAKEFF 389
Query: 257 QFDVDVY 263
VDVY
Sbjct: 390 GLMVDVY 396
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 96/228 (42%), Gaps = 43/228 (18%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVV 69
T++V Y + G + A LF Q+ ++ +VSW M+ G+ D+A +LF+ M + V
Sbjct: 303 TSLVDMYAKSGWVQVARVLFEQLMKRELVSWNAMICGYGMHGHFDEALKLFNKMRVEAQV 362
Query: 70 AQTNM----VLGYC-QDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEV 124
N+ VL C G V E +E F M +DV + +
Sbjct: 363 TPDNITFVGVLSACNHGGMVKEAKEFFGLM--------------------VDV----YSI 398
Query: 125 MPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNG-----EVQK 179
P + ++G+ GR ++A++L K MPM+ +S I G NG V+
Sbjct: 399 KPTVQHFTCLVDVLGHA--GRFEEAYDLIKGMPMQ----PDSGIWGALLNGCKIHKNVEL 452
Query: 180 ARVVFDQMRE---KDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVR 224
+ ++ E +D + + +Y + G + + LM G++
Sbjct: 453 GELALQKLIELEPEDAGNYVLLSNIYAQSGKWEKAARVRKLMTNRGLK 500
Score = 39.7 bits (91), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 79/176 (44%), Gaps = 20/176 (11%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMP-----EKNVVSWTVMLGGFIRDSRIDDAR 57
+R +VSW AM+ GY G EA LF +M + +++ +L + +A+
Sbjct: 327 KRELVSWNAMICGYGMHGHFDEALKLFNKMRVEAQVTPDNITFVGVLSACNHGGMVKEAK 386
Query: 58 RLFDMMPEKDVVAQTNM-------VLGYCQDGRVDEGREIFDEMP-KKNVISWTTMISGY 109
F +M + + T VLG+ GR +E ++ MP + + W +++G
Sbjct: 387 EFFGLMVDVYSIKPTVQHFTCLVDVLGHA--GRFEEAYDLIKGMPMQPDSGIWGALLNGC 444
Query: 110 VNNNRIDVA----RKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSV 161
+ +++ +KL E+ PE + ++ + Y Q G+ + A + K M + +
Sbjct: 445 KIHKNVELGELALQKLIELEPE-DAGNYVLLSNIYAQSGKWEKAARVRKLMTNRGL 499
>gi|110736949|dbj|BAF00431.1| hypothetical protein [Arabidopsis thaliana]
Length = 659
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 236/644 (36%), Positives = 350/644 (54%), Gaps = 72/644 (11%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMP 64
+V SW +++ G EA F M + +S F I LFD+
Sbjct: 40 DVFSWNSVIADLARSGDSAEALLAFSSMRK---LSLYPTRSSF--PCAIKACSSLFDIFS 94
Query: 65 EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEV 124
K Q V GY D + + +I Y +++ ARK+F+
Sbjct: 95 GKQT-HQQAFVFGYQSD-----------------IFVSSALIVMYSTCGKLEDARKVFDE 136
Query: 125 MPEKNEVSWTAMLMGYTQCGRIQDAWELFK----------------AMPMKSVVAS---- 164
+P+++ VSWT+M+ GY G DA LFK +M + SV+++
Sbjct: 137 IPKRDIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRV 196
Query: 165 -------------------------NSMILGLGQNGE--VQKARVVFDQMREKDDATWSG 197
N+++ + GE V AR +FDQ+ +KD +++
Sbjct: 197 PAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNS 256
Query: 198 MIKVYERKGYELEVIDLFT-LMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRC 256
++ VY + G E ++F L++ + V N +L +VL + +L G+ +H Q++R
Sbjct: 257 IMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRM 316
Query: 257 QFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVF 316
+ DV V + +I MY KCG + + FD +K++ W ++I+GY +G K+L++F
Sbjct: 317 GLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELF 376
Query: 317 HEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGR 376
M SGV P+ +T V VL+ACS+ G EG F +MK ++ VEP EHY CMVDLLGR
Sbjct: 377 PAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGR 436
Query: 377 AGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILL 436
AG ++ A LI+ M +PD+IIW SLL ACR H ++LAE++ +L +L+ N G Y+LL
Sbjct: 437 AGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLL 496
Query: 437 SNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRM 496
S+IYA GR+ DV +R M+ R ++KPPG S +E+ +VH+F D HP+ I
Sbjct: 497 SHIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGD-EEHPQREKIYEF 555
Query: 497 LEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKN 556
L ++ L EAGY ++S V HDVDEEEK +LR HSEKLA+A+G++ G + V+KN
Sbjct: 556 LAELNRKLLEAGYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKN 615
Query: 557 LRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
LRVC DCH+ IKLISK++ RE ++RDA RFHHFKDG CSC DYW
Sbjct: 616 LRVCSDCHNVIKLISKIVDREFVVRDAKRFHHFKDGGCSCGDYW 659
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 124/294 (42%), Gaps = 87/294 (29%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLF----------------------------WQM 32
+P+R++VSWT+M+RGY G +A +LF ++
Sbjct: 137 IPKRDIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRV 196
Query: 33 PEKNV---VSWTVMLGGFIRDSRIDD----------------ARRLFDMMPEKDVVAQTN 73
P K + + V+ GF R + + AR++FD + +KD V+ +
Sbjct: 197 PAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNS 256
Query: 74 MVLGYCQDGRVDEGREIFDEMPKK-----NVISWTTMISGYVNNNRIDVAR----KLFEV 124
++ Y Q G +E E+F + K N I+ +T++ ++ + + + ++ +
Sbjct: 257 IMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRM 316
Query: 125 MPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVF 184
E + + T+++ Y +CGR++ A + F M K+V + +MI G G +G KA
Sbjct: 317 GLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKA---- 372
Query: 185 DQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCA 238
++LF M GVR N+ + +SVL+ C+
Sbjct: 373 ---------------------------LELFPAMIDSGVRPNYITFVSVLAACS 399
>gi|356528451|ref|XP_003532816.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 579
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 190/494 (38%), Positives = 307/494 (62%), Gaps = 5/494 (1%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
M ++VV+W +M+ Y + G++ + LF MP +NVVSW ++ +++ + DA R
Sbjct: 55 MATKDVVTWNSMLSAYWQNGLLQRSKALFHSMPLRNVVSWNSIIAACVQNDNLQDAFRYL 114
Query: 61 DMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVN-NNRIDVAR 119
PEK+ + ++ G + GR+ + + +F+ MP NV+S+T M+ GY I AR
Sbjct: 115 AAAPEKNAASYNAIISGLARCGRMKDAQRLFEAMPCPNVVSYTAMVDGYARVEGGIGRAR 174
Query: 120 KLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQK 179
LFE MP +N VSW M+ G + G ++AWE+F MP K+ VA +MI G + G ++
Sbjct: 175 ALFEAMPRRNSVSWVVMINGLVENGLCEEAWEVFVRMPQKNDVARTAMITGFCKEGRMED 234
Query: 180 ARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCAS 239
AR +F ++R +D +W+ ++ Y + G E ++LF+ M + G++ + + +SV CAS
Sbjct: 235 ARDLFQEIRCRDLVSWNIIMTGYAQNGRGEEALNLFSQMIRTGMQPDDLTFVSVFIACAS 294
Query: 240 LASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSI 299
LASL+ G + HA L++ FD D+ V + LIT++ KCG +V +L+F + D+V WN+I
Sbjct: 295 LASLEEGSKAHALLIKHGFDSDLSVCNALITVHSKCGGIVDSELVFGQISHPDLVSWNTI 354
Query: 300 ISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYL 359
I+ +AQ+GL +K+ F +M + V PD +T + +LSAC GKV E +F M Y
Sbjct: 355 IAAFAQHGLYDKARSYFDQMVTVSVQPDGITFLSLLSACCRAGKVNESMNLFSLMVDNYG 414
Query: 360 VEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAA 419
+ P++EHYAC+VD++ RAGQ++ A K+I MPF+ D+ IWG++L AC H+ ++L E+AA
Sbjct: 415 IPPRSEHYACLVDVMSRAGQLQRACKIINEMPFKADSSIWGAVLAACSVHLNVELGELAA 474
Query: 420 KKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMF 479
+++L L+P N+G Y++LSNIYA+ G++ DV +R M+++ V K SW+++ K H F
Sbjct: 475 RRILNLDPFNSGAYVMLSNIYAAAGKWKDVHRIRVLMKEQGVKKQTAYSWLQIGNKTHYF 534
Query: 480 TGRDCVSHPEHPMI 493
G D P HP I
Sbjct: 535 VGGD----PSHPNI 544
>gi|449446125|ref|XP_004140822.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 809
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 220/598 (36%), Positives = 338/598 (56%), Gaps = 40/598 (6%)
Query: 22 ITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQD 81
+T+A +F + + VSW +L G+I +++A+ ++ MPE+ ++A +M++ +
Sbjct: 129 MTDACRVFNESSVLDSVSWNSILAGYIEIGNVEEAKHIYHQMPERSIIASNSMIVLFGMR 188
Query: 82 GRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLF------------------- 122
G V E ++FDEM +K++++W+ +I+ + N + A + F
Sbjct: 189 GLVVEACKLFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSAL 248
Query: 123 --------------------EVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVV 162
++ E A++ Y++CG I A +LF + ++
Sbjct: 249 SACANLLVVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLI 308
Query: 163 ASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEG 222
+ NSMI G + V A+ +FD M EKD +WS MI Y + E + LF MQ G
Sbjct: 309 SWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSG 368
Query: 223 VRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGK 282
+ + +L+SV+S CA LA+L+ G+ VHA + R ++V + + LI MY+KCG +
Sbjct: 369 FKPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETAL 428
Query: 283 LIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTG 342
+F K I WN++I G A GL E SL +F M V P+++T +GVL AC + G
Sbjct: 429 EVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMG 488
Query: 343 KVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSL 402
V EG+ F SM + ++P +HY CMVDLLGRAG++++A +L+ MP PD WG+L
Sbjct: 489 LVDEGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGAL 548
Query: 403 LGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVI 462
LGAC+ H ++ +KL++L+P + G ++LLSNIYAS+G++ DV E+R M K V+
Sbjct: 549 LGACKKHGDSEMGRRVGRKLIELQPDHDGFHVLLSNIYASKGKWDDVLEIRGMMTKHRVL 608
Query: 463 KPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDE 522
K PGCS IE +H F D +HP+ I ML ++ L+ GY PD + VL DVDE
Sbjct: 609 KIPGCSMIEANGVIHEFLAGD-KTHPDMDAIEDMLVEMAMKLKLEGYTPDINEVLLDVDE 667
Query: 523 EEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIIL 580
EEK +L HSEKLA+A+GL+ + PIR+MKNLR+C DCH+A KLISK R+I+
Sbjct: 668 EEKESTLFRHSEKLAIAFGLINISPPTPIRIMKNLRICNDCHTAAKLISKAFCRKIVF 725
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 135/506 (26%), Positives = 235/506 (46%), Gaps = 80/506 (15%)
Query: 28 LFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTN---MVLGYCQDGRV 84
+F + N W +M+ +I+ + A L+ M + A +++ C R
Sbjct: 34 IFNFIENTNCFMWNMMIRAYIQTNSPHFAFTLYKSMLSNYLGADNYTYPLLIQACSIRRS 93
Query: 85 D-EGREIFDEMPK----KNVISWTTMISGY-VNNNRIDVARKLFEVMPEKNEVSWTAMLM 138
+ E +++ + + K +V T+I+ + V +N D R +F + VSW ++L
Sbjct: 94 EWEAKQVHNHVLKLGFDSDVYVRNTLINCFSVCSNMTDACR-VFNESSVLDSVSWNSILA 152
Query: 139 GYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGM 198
GY + G +++A ++ MP +S++ASNSMI+ G G V +A +FD+M EKD TWS +
Sbjct: 153 GYIEIGNVEEAKHIYHQMPERSIIASNSMIVLFGMRGLVVEACKLFDEMLEKDMVTWSAL 212
Query: 199 IKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQF 258
I +++ E I F M K GV V+ +S LS CA+L ++ G+ +H+ ++
Sbjct: 213 IACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSACANLLVVNMGKLIHSLSLKIGT 272
Query: 259 DVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNS-------------------- 298
+ + + + LI MY KCG+++ + +FD D++ WNS
Sbjct: 273 ESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDS 332
Query: 299 -----------IISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEG 347
+ISGYAQ L +++L +F EM SG PD+ TLV V+SAC+ +++G
Sbjct: 333 MPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSVISACARLAALEQG 392
Query: 348 REIFESMKSKYL-------------------VEPKTEHYACMVD---------LLGRA-- 377
+ + +K L VE E + M++ +LG A
Sbjct: 393 KWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFYGMIEKGISTWNALILGLAMN 452
Query: 378 GQVEDAMKLIEAMP---FEPDAIIWGSLLGACRTHMKL-DLAEVAAKKLL---QLEPKNA 430
G VE ++ + M P+ I + +LGACR HM L D + ++ +++P N
Sbjct: 453 GLVESSLDMFSNMKKCHVTPNEITFMGVLGACR-HMGLVDEGQHHFYSMIHDHKIQP-NV 510
Query: 431 GPYILLSNIYASQGRFHDVAELRKNM 456
Y + ++ G+ + EL M
Sbjct: 511 KHYGCMVDLLGRAGKLQEAEELLNRM 536
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 94/397 (23%), Positives = 175/397 (44%), Gaps = 84/397 (21%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MPER++++ +M+ + G++ EA LF +M EK++V+W+ ++ F ++ ++A R F
Sbjct: 170 MPERSIIASNSMIVLFGMRGLVVEACKLFDEMLEKDMVTWSALIACFQQNEMYEEAIRTF 229
Query: 61 DMMPE-----KDVVA----------------------------------QTNMVLGYCQD 81
M + +VVA Q ++ Y +
Sbjct: 230 VGMHKIGVMVDEVVAVSALSACANLLVVNMGKLIHSLSLKIGTESYINLQNALIYMYSKC 289
Query: 82 GRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYT 141
G + R++FDE ++ISW +MISGY+ N +D A+ +F+ MPEK+ VSW++M+ GY
Sbjct: 290 GDIMVARKLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYA 349
Query: 142 QCGRIQDAWELFKAMPMK----------SVVASNSMILGLGQN----------------- 174
Q + LF+ M M SV+++ + + L Q
Sbjct: 350 QNDLFDETLALFQEMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVI 409
Query: 175 ------------GEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEG 222
G V+ A VF M EK +TW+ +I G +D+F+ M+K
Sbjct: 410 LGTTLIDMYMKCGCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCH 469
Query: 223 VRVNFPSLISVLSVCASLASLDHGRQVHAQLV---RCQFDVDVYVASVLITMYIKCGELV 279
V N + + VL C + +D G+ ++ + Q +V Y ++ + + G+L
Sbjct: 470 VTPNEITFMGVLGACRHMGLVDEGQHHFYSMIHDHKIQPNVKHY--GCMVDLLGRAGKLQ 527
Query: 280 KGKLIFDNFA-SKDIVMWNSIISGYAQYGLGEKSLKV 315
+ + + + + D+ W +++ ++G E +V
Sbjct: 528 EAEELLNRMPMTPDVATWGALLGACKKHGDSEMGRRV 564
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 127/275 (46%), Gaps = 22/275 (8%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMP 64
+++SW +M+ GY++ ++ A +F MPEK+VVSW+ M+ G+ ++ D+ LF M
Sbjct: 306 DLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQ 365
Query: 65 ----EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKK----NVISWTTMISGYVNNNRID 116
+ D +++ + +++G+ + + + NVI TT+I Y+ ++
Sbjct: 366 MSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVE 425
Query: 117 VARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMI-------- 168
A ++F M EK +W A+++G G ++ + ++F M K V N +
Sbjct: 426 TALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMK-KCHVTPNEITFMGVLGAC 484
Query: 169 --LGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVN 226
+GL G+ ++ D + + + M+ + R G E +L M + +
Sbjct: 485 RHMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMP---MTPD 541
Query: 227 FPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVD 261
+ ++L C + GR+V +L+ Q D D
Sbjct: 542 VATWGALLGACKKHGDSEMGRRVGRKLIELQPDHD 576
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 76/367 (20%), Positives = 155/367 (42%), Gaps = 22/367 (5%)
Query: 114 RIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQ 173
ID R++F + N W M+ Y Q A+ L+K+M + A N L Q
Sbjct: 27 HIDYTRRIFNFIENTNCFMWNMMIRAYIQTNSPHFAFTLYKSMLSNYLGADNYTYPLLIQ 86
Query: 174 NGEVQKARVVFDQMR--------EKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRV 225
++++ Q+ + D + +I + + +F E +
Sbjct: 87 ACSIRRSEWEAKQVHNHVLKLGFDSDVYVRNTLINCFSVCSNMTDACRVF----NESSVL 142
Query: 226 NFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIF 285
+ S S+L+ + +++ + ++ Q+ + + ++ +I ++ G +V+ +F
Sbjct: 143 DSVSWNSILAGYIEIGNVEEAKHIYHQMP----ERSIIASNSMIVLFGMRGLVVEACKLF 198
Query: 286 DNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVK 345
D KD+V W+++I+ + Q + E++++ F M GVM D+V V LSAC+ V
Sbjct: 199 DEMLEKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSACANLLVVN 258
Query: 346 EGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
G+ I S+ K E ++ + + G + A KL + + D I W S++
Sbjct: 259 MGKLI-HSLSLKIGTESYINLQNALIYMYSKCGDIMVARKLFDE-AYLLDLISWNSMISG 316
Query: 406 CRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPP 465
++K +L + A + K+ + + + YA F + L + M+ KP
Sbjct: 317 ---YLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSG-FKPD 372
Query: 466 GCSWIEV 472
+ + V
Sbjct: 373 ETTLVSV 379
>gi|449502858|ref|XP_004161763.1| PREDICTED: uncharacterized LOC101222622 [Cucumis sativus]
Length = 2355
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 212/578 (36%), Positives = 338/578 (58%), Gaps = 14/578 (2%)
Query: 29 FWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMM------PEKDVVAQTNMVLGYCQDG 82
F P N+ ++ +L F + + F+ P D T+++
Sbjct: 84 FLSFP--NIFAYNALLKAFSQHNAWHTTISYFNNQLVLPNAPNPDEYTFTSVLKACAGLA 141
Query: 83 RVDEGREIFDEMPK----KNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLM 138
+V EG+++ + K N+ +++ Y +A+KLF+ M ++ VSW ++
Sbjct: 142 QVLEGQKVHCFVTKYGCESNLFVRNSLVDLYFKVGCNCIAQKLFDEMVVRDVVSWNTLIS 201
Query: 139 GYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGM 198
GY G + A +F M K++V+ ++MI G + G +++AR +F+ M ++ +W+ M
Sbjct: 202 GYCFSGMVDKARMVFDGMMEKNLVSWSTMISGYARVGNLEEARQLFENMPMRNVVSWNAM 261
Query: 199 IKVYERKGYELEVIDLFTLMQKEG-VRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQ 257
I Y + + I+LF MQ EG + N +L+SVLS CA L +LD G+ +H + R +
Sbjct: 262 IAGYAQNEKYADAIELFRQMQHEGGLAPNDVTLVSVLSACAHLGALDLGKWIHRFIRRNK 321
Query: 258 FDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFH 317
+V +++ + L MY KCG +++ K +F +D++ W+ II G A YG ++ F
Sbjct: 322 IEVGLFLGNALADMYAKCGCVLEAKGVFHEMHERDVISWSIIIMGLAMYGYANEAFNFFA 381
Query: 318 EMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRA 377
EM G+ P+D++ +G+L+AC++ G V +G E F+ M Y + PK EHY C+VDLL RA
Sbjct: 382 EMIEDGLEPNDISFMGLLTACTHAGLVDKGLEYFDMMPQVYGITPKIEHYGCVVDLLSRA 441
Query: 378 GQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLS 437
G+++ A LI +MP +P+ I+WG+LLG CR + + E ++L+L+ ++G + L+
Sbjct: 442 GRLDQAESLINSMPMQPNVIVWGALLGGCRIYKDAERGERVVWRILELDSNHSGSLVYLA 501
Query: 438 NIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRML 497
N+YAS GR D A R MR +K PGCSWIE+ V+ F D SHP+ I M+
Sbjct: 502 NVYASMGRLDDAASCRLRMRDNKSMKTPGCSWIEINNSVYEFFMGDS-SHPQSLRIYSMI 560
Query: 498 EKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNL 557
++ ++ AGY P + V+H++DEEEK +L HSEKLA+A+GL+ EG IR++KNL
Sbjct: 561 RELKWKMKVAGYKPKTDLVIHNIDEEEKEDALSTHSEKLALAFGLINTSEGTTIRIVKNL 620
Query: 558 RVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCS 595
RVC DCH AIK+ISK++ REI++RD +RFHHFKDG CS
Sbjct: 621 RVCNDCHDAIKIISKIVEREIVVRDRSRFHHFKDGKCS 658
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 82/326 (25%), Positives = 161/326 (49%), Gaps = 15/326 (4%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDM 62
E N+ ++V Y + G A LF +M ++VVSW ++ G+ +D AR +FD
Sbjct: 159 ESNLFVRNSLVDLYFKVGCNCIAQKLFDEMVVRDVVSWNTLISGYCFSGMVDKARMVFDG 218
Query: 63 MPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLF 122
M EK++V+ + M+ GY + G ++E R++F+ MP +NV+SW MI+GY N + A +LF
Sbjct: 219 MMEKNLVSWSTMISGYARVGNLEEARQLFENMPMRNVVSWNAMIAGYAQNEKYADAIELF 278
Query: 123 EVMPEK-----NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSV----VASNSMILGLGQ 173
M + N+V+ ++L G + + + + + N++ +
Sbjct: 279 RQMQHEGGLAPNDVTLVSVLSACAHLGALDLGKWIHRFIRRNKIEVGLFLGNALADMYAK 338
Query: 174 NGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISV 233
G V +A+ VF +M E+D +WS +I GY E + F M ++G+ N S + +
Sbjct: 339 CGCVLEAKGVFHEMHERDVISWSIIIMGLAMYGYANEAFNFFAEMIEDGLEPNDISFMGL 398
Query: 234 LSVCASLASLDHGRQ---VHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFAS 290
L+ C +D G + + Q+ ++ Y ++ + + G L + + + ++
Sbjct: 399 LTACTHAGLVDKGLEYFDMMPQVYGITPKIEHY--GCVVDLLSRAGRLDQAESLINSMPM 456
Query: 291 K-DIVMWNSIISGYAQYGLGEKSLKV 315
+ ++++W +++ G Y E+ +V
Sbjct: 457 QPNVIVWGALLGGCRIYKDAERGERV 482
>gi|218184628|gb|EEC67055.1| hypothetical protein OsI_33800 [Oryza sativa Indica Group]
Length = 513
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 203/518 (39%), Positives = 312/518 (60%), Gaps = 16/518 (3%)
Query: 94 MPKKNVISWTTMISGYVNNNRIDVARKLFEVMP----EKNEVSWTAML--MGYTQCGRIQ 147
M +++ SWT++I+GY N+ D A L M + N ++ ++L G + I
Sbjct: 1 MSTRDMCSWTSLIAGYAQNDMPDEALGLLLGMLRGRFKPNGFTFASLLKAAGASASSGIG 60
Query: 148 DAWELFKAMPMK-----SVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVY 202
E A+ +K V ++++ + G + A VFDQ+ K+ +W+ +I +
Sbjct: 61 ---EQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGF 117
Query: 203 ERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDV 262
RKG + +F MQ+ G + SV S A + +L+ G+ VHA +++ +
Sbjct: 118 ARKGDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSA 177
Query: 263 YVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSS 322
+V + ++ MY K G ++ + +FD+ KD+V WNS+++ +AQYGLG +++ F EM
Sbjct: 178 FVGNTILDMYAKSGSMIDARKVFDHVDKKDLVTWNSMLTAFAQYGLGREAVTHFEEMRKC 237
Query: 323 GVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVED 382
GV + +T + +L+ACS+ G VKEG++ F+ MK L EP+ +HY +VDLLGRAG + D
Sbjct: 238 GVHLNQITFLSILTACSHGGLVKEGKQYFDMMKEHNL-EPEIDHYVTVVDLLGRAGLLND 296
Query: 383 AMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYAS 442
A+ I MP +P A +WG+LLG+CR H + + AA + +L+P + GP +LL NIYAS
Sbjct: 297 ALVFIFKMPMKPTAAVWGALLGSCRMHKNAKIGQFAADHVFELDPDDTGPPVLLYNIYAS 356
Query: 443 QGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGG 502
G++ A +RK M+ V K P CSW+E+E VHMF D +HP I + E+I
Sbjct: 357 TGQWDAAARVRKMMKATGVKKEPACSWVEIENSVHMFVAND-DTHPRSEEIYKKWEEISI 415
Query: 503 LLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGD 562
+R+AGY P++ +VL VDE+E+ L+YHSEK+A+A+ L+ +P G IR+MKN+R+CGD
Sbjct: 416 QIRKAGYVPNTDYVLLHVDEQERQAKLQYHSEKIALAFALINMPLGATIRIMKNIRICGD 475
Query: 563 CHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
CHSA + ISKV REI++RD NRFHHF G CSC DYW
Sbjct: 476 CHSAFRYISKVFEREIVVRDTNRFHHFSSGSCSCGDYW 513
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 118/264 (44%), Gaps = 16/264 (6%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM------PEKNVVSWTVMLGGFIRDSRID 54
M R++ SWT+++ GY + M EA L M P + + G S I
Sbjct: 1 MSTRDMCSWTSLIAGYAQNDMPDEALGLLLGMLRGRFKPNGFTFASLLKAAGASASSGIG 60
Query: 55 DARRLFDMMPE--KDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+ + + DV + ++ Y + GR+D +FD++ KN +SW +I+G+
Sbjct: 61 EQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARK 120
Query: 113 NRIDVARKLFEVMP----EKNEVSWTAMLMGYTQCGRI-QDAW---ELFKAMPMKSVVAS 164
+ +F M E +++++ G + Q W + K+ S
Sbjct: 121 GDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVG 180
Query: 165 NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVR 224
N+++ ++G + AR VFD + +KD TW+ M+ + + G E + F M+K GV
Sbjct: 181 NTILDMYAKSGSMIDARKVFDHVDKKDLVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVH 240
Query: 225 VNFPSLISVLSVCASLASLDHGRQ 248
+N + +S+L+ C+ + G+Q
Sbjct: 241 LNQITFLSILTACSHGGLVKEGKQ 264
>gi|215768832|dbj|BAH01061.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 842
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 223/621 (35%), Positives = 348/621 (56%), Gaps = 22/621 (3%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM----PEKNVVSWTVMLGGFIRDSRIDDA 56
M +VV W A+V G++ +A L +M PE NV +W +L G R R +A
Sbjct: 217 MGAGSVVPWNAVVACCARLGLVDDALELAARMSRSGPEPNVATWNTVLSGCSRHGRDREA 276
Query: 57 RRLFDMMPEK----DVVAQTNMVLGYCQDGRVDEGREI----FDEMPKKNVISWTTMISG 108
+ M ++ D ++++ G + G EI + +V + T ++
Sbjct: 277 LGVVASMLKQGLRPDATTVSSLLKSVANTGLLRHGMEIHCFFLRNQLEPDVYTGTALVDM 336
Query: 109 YVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMK----SVVAS 164
Y R+D A+K+ + + +N +W +++ GY GR A EL + M +
Sbjct: 337 YAKCGRLDCAQKVLDALEHRNLTTWNSLVAGYANAGRFDIALELVELMKKNRLDPDITTW 396
Query: 165 NSMILGLGQNGEVQKARVVFDQMREK----DDATWSGMIKVYERKGYELEVIDLFTLMQK 220
N +I G NG+ +A ++ Q++ + +W+ +I G + MQK
Sbjct: 397 NGLITGYSMNGQSSQAVLLLRQIKAAGVTPNVVSWTSLISGSCHNGEYEDSFYFCHEMQK 456
Query: 221 EGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVK 280
+GV+ + ++ +L CA LA G+++H +R +D D+ V++ LI MY K G LV
Sbjct: 457 DGVQPSLVTMSVLLRACAGLALQKKGKELHCFALRRAYDCDMVVSTALIDMYSKGGSLVS 516
Query: 281 GKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSY 340
K+IF++ K++V+ N++++G A +G G +++++FH+M++SG+ PD +T +L+AC
Sbjct: 517 AKVIFESIQQKNLVLCNAMLTGLAVHGQGREAIELFHDMWNSGLKPDSITFTALLTACRS 576
Query: 341 TGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWG 400
G V EG E F+SM++KY V+P TE+YACMVDLL R G +++AM IE P +P A WG
Sbjct: 577 MGLVTEGWEYFDSMETKYGVKPTTENYACMVDLLARCGYLDEAMDFIERSPIDPGASHWG 636
Query: 401 SLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRN 460
+LL C H L LAEVAA+ L LEP N+ Y+L+ N+Y + + + L+ M+ R
Sbjct: 637 ALLTGCSIHGNLALAEVAARNLFILEPYNSANYLLMMNLYEYERMYDEAESLKYAMKARG 696
Query: 461 VIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDV 520
V PG SWI++E+ +H+F D HPE I L ++ +++AGY PD+S + ++V
Sbjct: 697 VDSRPGWSWIQIEQGIHVFE-VDGKPHPETAEIYEELIRLVFQIKKAGYVPDTSCIAYNV 755
Query: 521 DEEEKVHSLRYHSEKLAVAYGLVKLPEG-VPIRVMKNLRVCGDCHSAIKLISKVMGREII 579
EEEK L H+EKLA+ YGL++ P+RVMKN R+C DCH K IS + R+II
Sbjct: 756 QEEEKEKLLLGHTEKLAITYGLIRSDASRAPVRVMKNTRMCNDCHEVAKHISSLCDRQII 815
Query: 580 LRDANRFHHFKDGLCSCRDYW 600
LRDA RFHHF DG CSC DYW
Sbjct: 816 LRDAVRFHHFVDGKCSCNDYW 836
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 122/283 (43%), Gaps = 8/283 (2%)
Query: 190 KDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQV 249
KD W+ + + E I +F MQ GV + + VL C +L GR V
Sbjct: 119 KDAVLWNKHVAMLAEAEEWDEAIAVFREMQARGVPADGYTCARVLHACGRAGALREGRAV 178
Query: 250 HAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLG 309
HA ++ D V L MY + ++ + D + +V WN++++ A+ GL
Sbjct: 179 HAYALKLALDAHPLVPGFLAGMYAENADVAAATRVLDAMGAGSVVPWNAVVACCARLGLV 238
Query: 310 EKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYAC 369
+ +L++ M SG P+ T VLS CS G+ +E + SM + L P +
Sbjct: 239 DDALELAARMSRSGPEPNVATWNTVLSGCSRHGRDREALGVVASMLKQGL-RPDATTVSS 297
Query: 370 MVDLLGRAGQVEDAMKL---IEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLE 426
++ + G + M++ EPD +L+ +LD A+ K L LE
Sbjct: 298 LLKSVANTGLLRHGMEIHCFFLRNQLEPDVYTGTALVDMYAKCGRLDCAQ---KVLDALE 354
Query: 427 PKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSW 469
+N + L YA+ GRF EL + M K+N + P +W
Sbjct: 355 HRNLTTWNSLVAGYANAGRFDIALELVELM-KKNRLDPDITTW 396
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 78/361 (21%), Positives = 138/361 (38%), Gaps = 57/361 (15%)
Query: 97 KNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYT------QCGRIQDAW 150
K+ + W ++ D A +F M + + GYT CGR
Sbjct: 119 KDAVLWNKHVAMLAEAEEWDEAIAVFREMQARGVPA-----DGYTCARVLHACGRAGALR 173
Query: 151 E--LFKAMPMKSVVASNSMILGL-----GQNGEVQKARVVFDQMREKDDATWSGMIKVYE 203
E A +K + ++ ++ G +N +V A V D M W+ ++
Sbjct: 174 EGRAVHAYALKLALDAHPLVPGFLAGMYAENADVAAATRVLDAMGAGSVVPWNAVVACCA 233
Query: 204 RKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVC-------------------------- 237
R G + ++L M + G N + +VLS C
Sbjct: 234 RLGLVDDALELAARMSRSGPEPNVATWNTVLSGCSRHGRDREALGVVASMLKQGLRPDAT 293
Query: 238 ---------ASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNF 288
A+ L HG ++H +R Q + DVY + L+ MY KCG L + + D
Sbjct: 294 TVSSLLKSVANTGLLRHGMEIHCFFLRNQLEPDVYTGTALVDMYAKCGRLDCAQKVLDAL 353
Query: 289 ASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGR 348
+++ WNS+++GYA G + +L++ M + + PD T G+++ S G+ +
Sbjct: 354 EHRNLTTWNSLVAGYANAGRFDIALELVELMKKNRLDPDITTWNGLITGYSMNGQSSQAV 413
Query: 349 EIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMP---FEPDAIIWGSLLGA 405
+ +K+ V P + ++ G+ ED+ M +P + LL A
Sbjct: 414 LLLRQIKAAG-VTPNVVSWTSLISGSCHNGEYEDSFYFCHEMQKDGVQPSLVTMSVLLRA 472
Query: 406 C 406
C
Sbjct: 473 C 473
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 94/242 (38%), Gaps = 49/242 (20%)
Query: 217 LMQKEGVRVNFPS-----LISVLSVCASLAS--LDH------GRQVHAQLVRCQFDVDVY 263
L+ +R P L+S+L CA L DH Q+H+ VR D
Sbjct: 29 LLNAAALRTGVPPYSAGVLVSLLRDCADLHGDDTDHRVARRLAPQLHSLAVRTGLSRDPR 88
Query: 264 VASVLITMYIKCGELVKGKLIFDNFA---SKDIVMWNSIISGYAQYGLGEKSLKVFHEMF 320
V L+ + + G + A +KD V+WN ++ A+ ++++ VF EM
Sbjct: 89 VTCALVDLLARLGRGPSCARLLHEAAEDGAKDAVLWNKHVAMLAEAEEWDEAIAVFREMQ 148
Query: 321 SSGVMPDDVTLVGVLSACSYTGKVKEGREIFE-SMKSKYLVEPKTEHYAC---------- 369
+ GV D T VL AC G ++EGR + ++K P +
Sbjct: 149 ARGVPADGYTCARVLHACGRAGALREGRAVHAYALKLALDAHPLVPGFLAGMYAENADVA 208
Query: 370 ----MVDLLG---------------RAGQVEDAMKLIEAMPF---EPDAIIWGSLLGACR 407
++D +G R G V+DA++L M EP+ W ++L C
Sbjct: 209 AATRVLDAMGAGSVVPWNAVVACCARLGLVDDALELAARMSRSGPEPNVATWNTVLSGCS 268
Query: 408 TH 409
H
Sbjct: 269 RH 270
>gi|15240085|ref|NP_196272.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170345|sp|Q9FG16.1|PP367_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g06540
gi|10178110|dbj|BAB11403.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332003649|gb|AED91032.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 622
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 201/461 (43%), Positives = 297/461 (64%)
Query: 140 YTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMI 199
Y CG I A +F M + VV+ SM+ G + G V+ AR +FD+M ++ TWS MI
Sbjct: 162 YANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMI 221
Query: 200 KVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFD 259
Y + + IDLF M++EGV N ++SV+S CA L +L+ G + + +V+
Sbjct: 222 NGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMT 281
Query: 260 VDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEM 319
V++ + + L+ M+ +CG++ K +F+ D + W+SII G A +G K++ F +M
Sbjct: 282 VNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQM 341
Query: 320 FSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQ 379
S G +P DVT VLSACS+ G V++G EI+E+MK + +EP+ EHY C+VD+LGRAG+
Sbjct: 342 ISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGK 401
Query: 380 VEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNI 439
+ +A I M +P+A I G+LLGAC+ + ++AE L++++P+++G Y+LLSNI
Sbjct: 402 LAEAENFILKMHVKPNAPILGALLGACKIYKNTEVAERVGNMLIKVKPEHSGYYVLLSNI 461
Query: 440 YASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEK 499
YA G++ + LR M+++ V KPPG S IE++ K++ FT D HPE I R E+
Sbjct: 462 YACAGQWDKIESLRDMMKEKLVKKPPGWSLIEIDGKINKFTMGDDQKHPEMGKIRRKWEE 521
Query: 500 IGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRV 559
I G +R GY ++ DVDEEEK S+ HSEKLA+AYG++K G IR++KNLRV
Sbjct: 522 ILGKIRLIGYKGNTGDAFFDVDEEEKESSIHMHSEKLAIAYGMMKTKPGTTIRIVKNLRV 581
Query: 560 CGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
C DCH+ KLIS+V GRE+I+RD NRFHHF++G+CSCRDYW
Sbjct: 582 CEDCHTVTKLISEVYGRELIVRDRNRFHHFRNGVCSCRDYW 622
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 112/209 (53%), Gaps = 8/209 (3%)
Query: 53 IDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
I A R+F M +DVV+ T+MV GYC+ G V+ RE+FDEMP +N+ +W+ MI+GY N
Sbjct: 168 IAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKN 227
Query: 113 NRIDVARKLFEVMPEKNEVS-WTAMLMGYTQCGRI------QDAWE-LFKAMPMKSVVAS 164
N + A LFE M + V+ T M+ + C + + A+E + K+ +++
Sbjct: 228 NCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILG 287
Query: 165 NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVR 224
+++ + G+++KA VF+ + E D +WS +IK G+ + + F+ M G
Sbjct: 288 TALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFI 347
Query: 225 VNFPSLISVLSVCASLASLDHGRQVHAQL 253
+ +VLS C+ ++ G +++ +
Sbjct: 348 PRDVTFTAVLSACSHGGLVEKGLEIYENM 376
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 143/318 (44%), Gaps = 42/318 (13%)
Query: 183 VFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGV---RVNFPSLISVLSVCAS 239
+F Q++ + ++ +I+ + + +T M K + + FP LI S
Sbjct: 73 IFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASS---E 129
Query: 240 LASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSI 299
+ + G Q H+Q+VR F DVYV + L+ MY CG + IF +D+V W S+
Sbjct: 130 MECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSM 189
Query: 300 ISGYAQYGLGEKSLKVFHEM-----FS--------------------------SGVMPDD 328
++GY + G+ E + ++F EM F+ GV+ ++
Sbjct: 190 VAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANE 249
Query: 329 VTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIE 388
+V V+S+C++ G ++ G +E + ++ A +VD+ R G +E A+ + E
Sbjct: 250 TVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTA-LVDMFWRCGDIEKAIHVFE 308
Query: 389 AMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLE--PKNAGPYILLSNIYASQGRF 446
+P E D++ W S++ H A +++ L P++ +LS + G
Sbjct: 309 GLP-ETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSAC-SHGGLV 366
Query: 447 HDVAELRKNMRKRNVIKP 464
E+ +NM+K + I+P
Sbjct: 367 EKGLEIYENMKKDHGIEP 384
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 120/231 (51%), Gaps = 12/231 (5%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDM 62
+ +V ++V Y G I AG +F QM ++VVSWT M+ G+ + +++AR +FD
Sbjct: 149 QNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVENAREMFDE 208
Query: 63 MPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTT----MISGYVNNNRIDVA 118
MP +++ + M+ GY ++ ++ ++F+ M ++ V++ T +IS + ++
Sbjct: 209 MPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGALEFG 268
Query: 119 RKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQN 174
+ +E + + N + TA++ + +CG I+ A +F+ +P ++ +S+I GL +
Sbjct: 269 ERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAVH 328
Query: 175 GEVQKARVVFDQMRE----KDDATWSGMIKVYERKGYELEVIDLFTLMQKE 221
G KA F QM D T++ ++ G + ++++ M+K+
Sbjct: 329 GHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKD 379
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/261 (20%), Positives = 114/261 (43%), Gaps = 27/261 (10%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRD----SRIDDA 56
MP RN+ +W+ M+ GY + +A LF M + VV+ ++ I ++
Sbjct: 209 MPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGALEFG 268
Query: 57 RRLFDMMPEKDVVAQTNMVLG------YCQDGRVDEGREIFDEMPKKNVISWTTMISGYV 110
R ++ + + + N++LG + + G +++ +F+ +P+ + +SW+++I G
Sbjct: 269 ERAYEYVVKSHMT--VNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKGLA 326
Query: 111 NNNRIDVARKLFEVMPE----KNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNS 166
+ A F M +V++TA+L + G ++ E+++ M +
Sbjct: 327 VHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEPRL 386
Query: 167 MILG-----LGQNGEVQKARVVFDQMREKDDATWSGMI----KVYERKGYELEVIDLFTL 217
G LG+ G++ +A +M K +A G + K+Y+ V ++
Sbjct: 387 EHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYKNTEVAERVGNMLIK 446
Query: 218 MQKEGVRVNFPSLISVLSVCA 238
++ E + L+S + CA
Sbjct: 447 VKPE--HSGYYVLLSNIYACA 465
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/247 (20%), Positives = 105/247 (42%), Gaps = 16/247 (6%)
Query: 223 VRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVK-- 280
+R P L ++L C+S + L + +H L+R DV+VAS L+ + + K
Sbjct: 9 LRFKHPKL-ALLQSCSSFSDL---KIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPT 64
Query: 281 -----GKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVL 335
IF + ++ ++N +I ++ K+ + +M S + PD++T ++
Sbjct: 65 NLLGYAYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLI 124
Query: 336 SACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPD 395
A S V G + S ++ + +V + G + A ++ M F D
Sbjct: 125 KASSEMECVLVGEQT-HSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFR-D 182
Query: 396 AIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKN 455
+ W S++ + K + E A + ++ +N + ++ N YA F +L +
Sbjct: 183 VVSWTSMVAG---YCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEF 239
Query: 456 MRKRNVI 462
M++ V+
Sbjct: 240 MKREGVV 246
>gi|297738895|emb|CBI28140.3| unnamed protein product [Vitis vinifera]
Length = 580
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 237/604 (39%), Positives = 335/604 (55%), Gaps = 65/604 (10%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
+P + +++RGY + + +A LF+Q+ +ML G +D R F
Sbjct: 38 IPNPTTFTCNSIIRGYTNKNLPRQA-ILFYQL---------MMLQG------LDPDRFTF 81
Query: 61 DMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVIS----WTTMISGYVNNNRID 116
+ + G + EG+++ K S T+++ Y N +
Sbjct: 82 PSL--------------FKSCGVLCEGKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLV 127
Query: 117 VARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGE 176
ARK+F+ M K+ VSW M+ Y Q +A +LF+ M +ASN + NG
Sbjct: 128 SARKVFDKMVNKSVVSWATMIGAYAQWDLPHEAIKLFRRME----IASNLFCWNIMINGH 183
Query: 177 VQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSV 236
V E YE E + LF MQ GV+ + ++ S+L
Sbjct: 184 V-------------------------EDSDYE-EALSLFNEMQLSGVKGDKVTMASLLIA 217
Query: 237 CASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMW 296
C L +L+ G+ +H + + + +VDV + + L+ MY KCG + +F KD++ W
Sbjct: 218 CTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQEMPEKDVMTW 277
Query: 297 NSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKS 356
++I G A G G K+L++FHEM S V PD +T VGVL+ACS+ G V EG F SM +
Sbjct: 278 TALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSHAGLVNEGIAYFNSMPN 337
Query: 357 KYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAE 416
KY ++P EHY CMVD+LGRAG++ +A LI+ MP PD + LL ACR H L +AE
Sbjct: 338 KYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPMAPDYFVLVGLLSACRIHGNLVVAE 397
Query: 417 VAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKV 476
AA++L++L+PKN G Y+LLSNIY+S + ++R+ M +RN+ KPPGCS IEV V
Sbjct: 398 RAAQQLIELDPKNGGTYVLLSNIYSSMKNWEAAKKMRELMVERNIKKPPGCSAIEVGGVV 457
Query: 477 HMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKL 536
H F D VSHP+ I L+ + L+ AGY PD S VL D+DE+EK + L HSEKL
Sbjct: 458 HEFVKGD-VSHPQSSEIYETLDDMMRRLKSAGYVPDKSEVLFDMDEKEKENELSLHSEKL 516
Query: 537 AVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSC 596
A+A+GL+ G PIRV+KNLRVC DCHSA+K IS+V REII+RD NRFHHF G CSC
Sbjct: 517 AIAFGLLSTTPGTPIRVVKNLRVCSDCHSAMKFISEVYNREIIVRDRNRFHHFTKGSCSC 576
Query: 597 RDYW 600
RD+W
Sbjct: 577 RDFW 580
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 125/269 (46%), Gaps = 43/269 (15%)
Query: 170 GLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGV---RVN 226
L +G + AR+VF+Q+ T + +I+ Y K + I + LM +G+ R
Sbjct: 21 ALHDSGSLPYARLVFNQIPNPTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFT 80
Query: 227 FPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFD 286
FPSL S L G+Q+H + F D Y+ + L+ MY CG LV + +FD
Sbjct: 81 FPSLFK------SCGVLCEGKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFD 134
Query: 287 NFASKDIVMWNSIISGYAQYGLG--------------------------------EKSLK 314
+K +V W ++I YAQ+ L E++L
Sbjct: 135 KMVNKSVVSWATMIGAYAQWDLPHEAIKLFRRMEIASNLFCWNIMINGHVEDSDYEEALS 194
Query: 315 VFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLL 374
+F+EM SGV D VT+ +L AC++ G ++ G+ + ++ K +E +VD+
Sbjct: 195 LFNEMQLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIE-KEKIEVDVALGTALVDMY 253
Query: 375 GRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
+ G +E AM++ + MP E D + W +L+
Sbjct: 254 AKCGSIESAMRVFQEMP-EKDVMTWTALI 281
Score = 45.4 bits (106), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 78/177 (44%), Gaps = 13/177 (7%)
Query: 253 LVRCQFDVDVYVASVLITMYI--KCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGE 310
L C F VD + AS ++ G L +L+F+ + NSII GY L
Sbjct: 2 LRTCLF-VDPFSASKIVAFCALHDSGSLPYARLVFNQIPNPTTFTCNSIIRGYTNKNLPR 60
Query: 311 KSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIF-ESMKSKYLVEPKTEHYAC 369
+++ + M G+ PD T + +C G + EG+++ S K + + ++
Sbjct: 61 QAILFYQLMMLQGLDPDRFTFPSLFKSC---GVLCEGKQLHCHSTKLGFASDAYIQN--T 115
Query: 370 MVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLE 426
++++ G + A K+ + M + W +++GA + + DL A K ++E
Sbjct: 116 LMNMYSNCGCLVSARKVFDKM-VNKSVVSWATMIGA---YAQWDLPHEAIKLFRRME 168
>gi|48475086|gb|AAT44155.1| hypothetical protein, contains pentrtricopeptide (PPR) repeat
[Oryza sativa Japonica Group]
gi|125568883|gb|EAZ10398.1| hypothetical protein OsJ_00231 [Oryza sativa Japonica Group]
Length = 836
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 223/621 (35%), Positives = 348/621 (56%), Gaps = 22/621 (3%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM----PEKNVVSWTVMLGGFIRDSRIDDA 56
M +VV W A+V G++ +A L +M PE NV +W +L G R R +A
Sbjct: 217 MGAGSVVPWNAVVACCARLGLVDDALELAARMSRSGPEPNVATWNTVLSGCSRHGRDREA 276
Query: 57 RRLFDMMPEK----DVVAQTNMVLGYCQDGRVDEGREI----FDEMPKKNVISWTTMISG 108
+ M ++ D ++++ G + G EI + +V + T ++
Sbjct: 277 LGVVASMLKQGLRPDATTVSSLLKSVANTGLLRHGMEIHCFFLRNQLEPDVYTGTALVDM 336
Query: 109 YVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMK----SVVAS 164
Y R+D A+K+ + + +N +W +++ GY GR A EL + M +
Sbjct: 337 YAKCGRLDCAQKVLDALEHRNLTTWNSLVAGYANAGRFDIALELVELMKKNRLDPDITTW 396
Query: 165 NSMILGLGQNGEVQKARVVFDQMREK----DDATWSGMIKVYERKGYELEVIDLFTLMQK 220
N +I G NG+ +A ++ Q++ + +W+ +I G + MQK
Sbjct: 397 NGLITGYSMNGQSSQAVLLLRQIKAAGVTPNVVSWTSLISGSCHNGEYEDSFYFCHEMQK 456
Query: 221 EGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVK 280
+GV+ + ++ +L CA LA G+++H +R +D D+ V++ LI MY K G LV
Sbjct: 457 DGVQPSLVTMSVLLRACAGLALQKKGKELHCFALRRAYDCDMVVSTALIDMYSKGGSLVS 516
Query: 281 GKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSY 340
K+IF++ K++V+ N++++G A +G G +++++FH+M++SG+ PD +T +L+AC
Sbjct: 517 AKVIFESIQQKNLVLCNAMLTGLAVHGQGREAIELFHDMWNSGLKPDSITFTALLTACRS 576
Query: 341 TGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWG 400
G V EG E F+SM++KY V+P TE+YACMVDLL R G +++AM IE P +P A WG
Sbjct: 577 MGLVTEGWEYFDSMETKYGVKPTTENYACMVDLLARCGYLDEAMDFIERSPIDPGASHWG 636
Query: 401 SLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRN 460
+LL C H L LAEVAA+ L LEP N+ Y+L+ N+Y + + + L+ M+ R
Sbjct: 637 ALLTGCSIHGNLALAEVAARNLFILEPYNSANYLLMMNLYEYERMYDEAESLKYAMKARG 696
Query: 461 VIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDV 520
V PG SWI++E+ +H+F D HPE I L ++ +++AGY PD+S + ++V
Sbjct: 697 VDSRPGWSWIQIEQGIHVFE-VDGKPHPETAEIYEELIRLVFQIKKAGYVPDTSCIAYNV 755
Query: 521 DEEEKVHSLRYHSEKLAVAYGLVKLPEG-VPIRVMKNLRVCGDCHSAIKLISKVMGREII 579
EEEK L H+EKLA+ YGL++ P+RVMKN R+C DCH K IS + R+II
Sbjct: 756 QEEEKEKLLLGHTEKLAITYGLIRSDASRAPVRVMKNTRMCNDCHEVAKHISSLCDRQII 815
Query: 580 LRDANRFHHFKDGLCSCRDYW 600
LRDA RFHHF DG CSC DYW
Sbjct: 816 LRDAVRFHHFVDGKCSCNDYW 836
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 122/283 (43%), Gaps = 8/283 (2%)
Query: 190 KDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQV 249
KD W+ + + E I +F MQ GV + + VL C +L GR V
Sbjct: 119 KDAVLWNKHVAMLAEAEEWDEAIAVFREMQARGVPADGYTCARVLHACGRAGALREGRAV 178
Query: 250 HAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLG 309
HA ++ D V L MY + ++ + D + +V WN++++ A+ GL
Sbjct: 179 HAYALKLALDAHPLVPGFLAGMYAENADVAAATRVLDAMGAGSVVPWNAVVACCARLGLV 238
Query: 310 EKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYAC 369
+ +L++ M SG P+ T VLS CS G+ +E + SM + L P +
Sbjct: 239 DDALELAARMSRSGPEPNVATWNTVLSGCSRHGRDREALGVVASMLKQGL-RPDATTVSS 297
Query: 370 MVDLLGRAGQVEDAMKL---IEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLE 426
++ + G + M++ EPD +L+ +LD A+ K L LE
Sbjct: 298 LLKSVANTGLLRHGMEIHCFFLRNQLEPDVYTGTALVDMYAKCGRLDCAQ---KVLDALE 354
Query: 427 PKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSW 469
+N + L YA+ GRF EL + M K+N + P +W
Sbjct: 355 HRNLTTWNSLVAGYANAGRFDIALELVELM-KKNRLDPDITTW 396
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 78/361 (21%), Positives = 138/361 (38%), Gaps = 57/361 (15%)
Query: 97 KNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYT------QCGRIQDAW 150
K+ + W ++ D A +F M + + GYT CGR
Sbjct: 119 KDAVLWNKHVAMLAEAEEWDEAIAVFREMQARGVPA-----DGYTCARVLHACGRAGALR 173
Query: 151 E--LFKAMPMKSVVASNSMILGL-----GQNGEVQKARVVFDQMREKDDATWSGMIKVYE 203
E A +K + ++ ++ G +N +V A V D M W+ ++
Sbjct: 174 EGRAVHAYALKLALDAHPLVPGFLAGMYAENADVAAATRVLDAMGAGSVVPWNAVVACCA 233
Query: 204 RKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVC-------------------------- 237
R G + ++L M + G N + +VLS C
Sbjct: 234 RLGLVDDALELAARMSRSGPEPNVATWNTVLSGCSRHGRDREALGVVASMLKQGLRPDAT 293
Query: 238 ---------ASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNF 288
A+ L HG ++H +R Q + DVY + L+ MY KCG L + + D
Sbjct: 294 TVSSLLKSVANTGLLRHGMEIHCFFLRNQLEPDVYTGTALVDMYAKCGRLDCAQKVLDAL 353
Query: 289 ASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGR 348
+++ WNS+++GYA G + +L++ M + + PD T G+++ S G+ +
Sbjct: 354 EHRNLTTWNSLVAGYANAGRFDIALELVELMKKNRLDPDITTWNGLITGYSMNGQSSQAV 413
Query: 349 EIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMP---FEPDAIIWGSLLGA 405
+ +K+ V P + ++ G+ ED+ M +P + LL A
Sbjct: 414 LLLRQIKAAG-VTPNVVSWTSLISGSCHNGEYEDSFYFCHEMQKDGVQPSLVTMSVLLRA 472
Query: 406 C 406
C
Sbjct: 473 C 473
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 94/242 (38%), Gaps = 49/242 (20%)
Query: 217 LMQKEGVRVNFPS-----LISVLSVCASLAS--LDH------GRQVHAQLVRCQFDVDVY 263
L+ +R P L+S+L CA L DH Q+H+ VR D
Sbjct: 29 LLNAAALRTGVPPYSAGVLVSLLRDCADLHGDDTDHRVARRLAPQLHSLAVRTGLSRDPR 88
Query: 264 VASVLITMYIKCGELVKGKLIFDNFA---SKDIVMWNSIISGYAQYGLGEKSLKVFHEMF 320
V L+ + + G + A +KD V+WN ++ A+ ++++ VF EM
Sbjct: 89 VTCALVDLLARLGRGPSCARLLHEAAEDGAKDAVLWNKHVAMLAEAEEWDEAIAVFREMQ 148
Query: 321 SSGVMPDDVTLVGVLSACSYTGKVKEGREIFE-SMKSKYLVEPKTEHYAC---------- 369
+ GV D T VL AC G ++EGR + ++K P +
Sbjct: 149 ARGVPADGYTCARVLHACGRAGALREGRAVHAYALKLALDAHPLVPGFLAGMYAENADVA 208
Query: 370 ----MVDLLG---------------RAGQVEDAMKLIEAMPF---EPDAIIWGSLLGACR 407
++D +G R G V+DA++L M EP+ W ++L C
Sbjct: 209 AATRVLDAMGAGSVVPWNAVVACCARLGLVDDALELAARMSRSGPEPNVATWNTVLSGCS 268
Query: 408 TH 409
H
Sbjct: 269 RH 270
>gi|359489786|ref|XP_002271725.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Vitis vinifera]
Length = 852
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 246/669 (36%), Positives = 365/669 (54%), Gaps = 72/669 (10%)
Query: 1 MPERNV---VSWTAMVRGYVEEGMITEAGTLFWQMPEK-----------NVVSWTVMLGG 46
M ER V VSW ++V Y++ G A +F +M E NV+ +G
Sbjct: 187 MRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGA 246
Query: 47 FIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMI 106
+ R ++ + +DV +V Y + G ++E ++F+ M K+V+SW M+
Sbjct: 247 WSRGKQVHGYALRSGLF--EDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMV 304
Query: 107 SGYVNNNRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAMPM---- 158
+GY R D A LFE + E+ N V+W+A++ GY Q G +A ++F+ M +
Sbjct: 305 TGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMRLCGSE 364
Query: 159 KSVVASNSMILGLGQNGEV----------------------------------------- 177
+VV S++ G G +
Sbjct: 365 PNVVTLVSLLSGCALAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCKS 424
Query: 178 -QKARVVFDQMREKDDA--TWSGMIKVYERKGYELEVIDLFTLMQKEG--VRVNFPSLIS 232
+ AR +FD + KD + TW+ +I + G E ++LF+ M + V N ++
Sbjct: 425 PKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTISC 484
Query: 233 VLSVCASLASLDHGRQVHAQLVRCQFDVD-VYVASVLITMYIKCGELVKGKLIFDNFASK 291
L CA L +L GRQ+HA ++R +F+ ++VA+ LI MY K G++ +++FDN +
Sbjct: 485 ALMACARLGALRFGRQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQR 544
Query: 292 DIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIF 351
+ V W S+++GY +G GE++L++F+EM G++PD VT V VL ACS++G V +G F
Sbjct: 545 NGVSWTSLMTGYGMHGRGEEALQIFYEMQKVGLVPDGVTFVVVLYACSHSGMVDQGINYF 604
Query: 352 ESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMK 411
M + V P EHYACMVDLL RAG++++AM+LI MP +P +W +LL ACR +
Sbjct: 605 NGMNKDFGVVPGAEHYACMVDLLSRAGRLDEAMELIRGMPMKPTPAVWVALLSACRVYAN 664
Query: 412 LDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIE 471
++L E AA +LL+LE N G Y LLSNIYA+ + DVA +R M+ + K PGCSW++
Sbjct: 665 VELGEYAANQLLELESGNDGSYTLLSNIYANARCWKDVARIRYLMKNTGIKKRPGCSWVQ 724
Query: 472 VEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRY 531
K F D SHP I +L + ++ GY PD+ F LHDVD+EEK L
Sbjct: 725 GRKGTATFFAGDW-SHPMSQQIYDLLRDLMQRIKALGYVPDNRFALHDVDDEEKGDLLSE 783
Query: 532 HSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKD 591
HSEKLA+AYG++ G PIR+ KNLR CGDCHSA IS ++ EII+RD++RFHHFK+
Sbjct: 784 HSEKLALAYGILTTAPGAPIRITKNLRACGDCHSAFTYISIIIEHEIIVRDSSRFHHFKN 843
Query: 592 GLCSCRDYW 600
G CSCR YW
Sbjct: 844 GSCSCRGYW 852
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 114/477 (23%), Positives = 203/477 (42%), Gaps = 75/477 (15%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQM------PEKNVVSWTVMLGGFIRDSRIDDA 56
V W ++R V G + + L+ +M P+ + + G I R +
Sbjct: 88 SHTVFWWNQLIRRSVHLGFLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGEIPSFRCGAS 147
Query: 57 RR--LFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNV---ISWTTMISGYVN 111
+F E +V +V Y + G + R++FDEM ++ V +SW ++++ Y+
Sbjct: 148 VHAVVFASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQ 207
Query: 112 NNRIDVARKLFEVMPEK-----NEVSWTAMLMGYTQCGRIQDAWE--------LFKAMPM 158
A K+FE M E + VS +L G AW ++
Sbjct: 208 GGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVG----AWSRGKQVHGYALRSGLF 263
Query: 159 KSVVASNSMILGLGQNGEVQKARVVFDQMREK------------------DDA------- 193
+ V N+++ + G +++A VF++M+ K DDA
Sbjct: 264 EDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKI 323
Query: 194 ----------TWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASL 243
TWS +I Y ++G E +D+F M+ G N +L+S+LS CA +L
Sbjct: 324 REEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMRLCGSEPNVVTLVSLLSGCALAGTL 383
Query: 244 DHGRQVHAQLVRCQFDV-------DVYVASVLITMYIKCGELVKGKLIFDNFASKD--IV 294
HG++ H ++ ++ D+ V + LI MY KC + +FD KD +V
Sbjct: 384 LHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVV 443
Query: 295 MWNSIISGYAQYGLGEKSLKVFHEMFS--SGVMPDDVTLVGVLSACSYTGKVKEGREIFE 352
W +I G AQ+G ++L++F +M + VMP+ T+ L AC+ G ++ GR+I
Sbjct: 444 TWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHA 503
Query: 353 SMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTH 409
+ C++D+ ++G V+ A + + M + + + W SL+ H
Sbjct: 504 YVLRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDNM-HQRNGVSWTSLMTGYGMH 559
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 151/317 (47%), Gaps = 50/317 (15%)
Query: 160 SVVASNSMILGLGQNGEVQKARVVFDQMREK---DDATWSGMIKVYERKGYELEVIDLFT 216
+V N ++ G+ G + AR VFD+MRE+ D +W+ ++ Y + G + + +F
Sbjct: 160 NVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFE 219
Query: 217 LMQKE-GVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKC 275
M ++ G+R + SL++VL CAS+ + G+QVH +R DV+V + ++ MY KC
Sbjct: 220 RMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKC 279
Query: 276 GELVKGKLIFDNFASKDIVMWNS-----------------------------------II 300
G + + +F+ KD+V WN+ +I
Sbjct: 280 GMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVI 339
Query: 301 SGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLV 360
+GYAQ GLG ++L VF +M G P+ VTLV +LS C+ G + G+E K+++
Sbjct: 340 AGYAQRGLGFEALDVFRQMRLCGSEPNVVTLVSLLSGCALAGTLLHGKET-HCHAIKWIL 398
Query: 361 -----EPKTEHYA--CMVDLLGRAGQVEDAMKLIEAMPFEPDAII-WGSLLGACRTHMKL 412
+P + ++D+ + + A + + +P + +++ W L+G H +
Sbjct: 399 NLDENDPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEA 458
Query: 413 DLAEVAAKKLLQLEPKN 429
+ A ++LQ P N
Sbjct: 459 NEALELFSQMLQ--PDN 473
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 71/178 (39%), Gaps = 11/178 (6%)
Query: 232 SVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNF--A 289
++ C SLAS + +H QL+ D + +I+MY+ K + +
Sbjct: 34 TLFHQCKSLASAE---LIHQQLLVQGLPHD---PTHIISMYLTFNSPAKALSVLRRLHPS 87
Query: 290 SKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGRE 349
S + WN +I G E L+++ M G PD T VL AC + G
Sbjct: 88 SHTVFWWNQLIRRSVHLGFLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGEIPSFRCGAS 147
Query: 350 IFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFE--PDAIIWGSLLGA 405
+ + + E +V + GR G E+A ++ + M D + W S++ A
Sbjct: 148 VHAVVFASGF-EWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAA 204
>gi|297798134|ref|XP_002866951.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312787|gb|EFH43210.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 630
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 195/469 (41%), Positives = 306/469 (65%), Gaps = 3/469 (0%)
Query: 134 TAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDA 193
T ++ Y + G + A ++F MP +S+V+S +MI + G V+ AR +FD+M E+D
Sbjct: 163 TGLVDIYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDRMCERDIV 222
Query: 194 TWSGMIKVYERKGYELEVIDLFTLMQKEG-VRVNFPSLISVLSVCASLASLDHGRQVHAQ 252
+W+ MI Y + G+ + + LF + +G + + ++++ LS C+ + +L+ GR +H
Sbjct: 223 SWNVMIDGYSQHGFPSDALMLFQKLLADGKPKPDEITVVAALSACSQIGALETGRWIHVF 282
Query: 253 LVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKS 312
+ + ++V V + LI MY KCG L + L+F++ KDIV WN++I+GYA +G + +
Sbjct: 283 VNSSRIRLNVKVCTALIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMITGYAMHGYSQDA 342
Query: 313 LKVFHEMFS-SGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMV 371
L++F EM +G+ P D+T +G L AC++ G V EG +IFESM +Y ++PK EHY C+V
Sbjct: 343 LRLFDEMQGITGLQPTDITFIGTLQACAHAGLVNEGIQIFESMGQEYGIKPKIEHYGCLV 402
Query: 372 DLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAG 431
LLGRAGQ++ A ++I+ M E D+++W S+LG+C+ H + L + A+ L+ N+G
Sbjct: 403 SLLGRAGQLKRAYEIIKNMNMEADSVLWSSVLGSCKLHGEFMLGKEIAEYLIGQNISNSG 462
Query: 432 PYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHP 491
Y+LLSNIYA G + VA++R M+++ ++K PG S IE++ KVH F D H +
Sbjct: 463 IYVLLSNIYALVGDYEGVAKVRNLMKEKGIVKEPGISTIEIDNKVHEFRAGD-REHLKSK 521
Query: 492 MIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPI 551
I ML K+ ++ GY P+++ VLHD++E EK SL+ HSE+LA+AYGL+ G P+
Sbjct: 522 EIYTMLRKMSERIKSHGYVPNTNTVLHDLEETEKERSLQVHSERLAIAYGLISTKPGSPL 581
Query: 552 RVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
++ KNLRVC DCH+ KLISK+ GR+I++RD NRFHHF DG CSC D+W
Sbjct: 582 KIFKNLRVCSDCHTVTKLISKITGRKIVMRDRNRFHHFSDGSCSCDDFW 630
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 130/265 (49%), Gaps = 14/265 (5%)
Query: 56 ARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRI 115
A+++FD MPE+ +V+ T M+ Y + G V+ R +FD M +++++SW MI GY +
Sbjct: 178 AQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDRMCERDIVSWNVMIDGYSQHGFP 237
Query: 116 DVARKLFEVM-----PEKNEVSWTAMLMGYTQCGRIQDA-W-ELF--KAMPMKSVVASNS 166
A LF+ + P+ +E++ A L +Q G ++ W +F + +V +
Sbjct: 238 SDALMLFQKLLADGKPKPDEITVVAALSACSQIGALETGRWIHVFVNSSRIRLNVKVCTA 297
Query: 167 MILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQK-EGVRV 225
+I + G +++A +VF+ KD W+ MI Y GY + + LF MQ G++
Sbjct: 298 LIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMITGYAMHGYSQDALRLFDEMQGITGLQP 357
Query: 226 NFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVA--SVLITMYIKCGELVKGKL 283
+ I L CA ++ G Q+ + + ++ + + L+++ + G+L +
Sbjct: 358 TDITFIGTLQACAHAGLVNEGIQIFESMGQ-EYGIKPKIEHYGCLVSLLGRAGQLKRAYE 416
Query: 284 IFDNFA-SKDIVMWNSIISGYAQYG 307
I N D V+W+S++ +G
Sbjct: 417 IIKNMNMEADSVLWSSVLGSCKLHG 441
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 92/352 (26%), Positives = 163/352 (46%), Gaps = 53/352 (15%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVV 69
T +V Y + G + A +F +MPE+++VS T M+ + + ++ AR LFD M E+D+V
Sbjct: 163 TGLVDIYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDRMCERDIV 222
Query: 70 AQTNMVLGYCQDGRVDEGREIFDEM-----PKKNVISWTTMISG---------------Y 109
+ M+ GY Q G + +F ++ PK + I+ +S +
Sbjct: 223 SWNVMIDGYSQHGFPSDALMLFQKLLADGKPKPDEITVVAALSACSQIGALETGRWIHVF 282
Query: 110 VNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMIL 169
VN++RI + K+ TA++ Y++CG +++A +F P K +VA N+MI
Sbjct: 283 VNSSRIRLNVKV-----------CTALIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIT 331
Query: 170 GLGQNGEVQKARVVFDQMR-----EKDDATWSGMIKVYERKGYELEVIDLFTLMQKE-GV 223
G +G Q A +FD+M+ + D T+ G ++ G E I +F M +E G+
Sbjct: 332 GYAMHGYSQDALRLFDEMQGITGLQPTDITFIGTLQACAHAGLVNEGIQIFESMGQEYGI 391
Query: 224 RV---NFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVK 280
+ ++ L+S+L L ++ + + + D + S ++ GE +
Sbjct: 392 KPKIEHYGCLVSLLGRAGQL------KRAYEIIKNMNMEADSVLWSSVLGSCKLHGEFML 445
Query: 281 GK-----LIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPD 327
GK LI N ++ I + S I YA G E KV + M G++ +
Sbjct: 446 GKEIAEYLIGQNISNSGIYVLLSNI--YALVGDYEGVAKVRNLMKEKGIVKE 495
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/270 (21%), Positives = 120/270 (44%), Gaps = 38/270 (14%)
Query: 172 GQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLI 231
+G+++ + +F Q + D ++ I G + + L+ + + N +
Sbjct: 73 ASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSQINPNEFTFS 132
Query: 232 SVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKG---------- 281
S+L C++ + G+ +H +++ +D YVA+ L+ +Y K G++V
Sbjct: 133 SILKSCSTKS----GKLIHTHVLKFGLGLDPYVATGLVDIYAKGGDVVSAQKVFDRMPER 188
Query: 282 ---------------------KLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMF 320
+ +FD +DIV WN +I GY+Q+G +L +F ++
Sbjct: 189 SLVSSTAMITCYAKQGNVEAARALFDRMCERDIVSWNVMIDGYSQHGFPSDALMLFQKLL 248
Query: 321 SSG-VMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQ 379
+ G PD++T+V LSACS G ++ GR I + S + + ++D+ + G
Sbjct: 249 ADGKPKPDEITVVAALSACSQIGALETGRWIHVFVNSSR-IRLNVKVCTALIDMYSKCGS 307
Query: 380 VEDAMKLIEAMPFEPDAIIWGSLLGACRTH 409
+E+A+ + P D + W +++ H
Sbjct: 308 LEEAVLVFNDTP-RKDIVAWNAMITGYAMH 336
>gi|224117814|ref|XP_002331638.1| predicted protein [Populus trichocarpa]
gi|222874034|gb|EEF11165.1| predicted protein [Populus trichocarpa]
Length = 480
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 207/468 (44%), Positives = 299/468 (63%), Gaps = 9/468 (1%)
Query: 136 MLMGYTQC--GRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDA 193
+L Y++C G + A +LF MP K V ++MI + A VF+ M EKD
Sbjct: 19 ILSRYSKCVVGDLNLACKLFDEMPHKDTVTLDTMI-----TAYFESAYKVFELMPEKDIV 73
Query: 194 TWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQL 253
W+ +I + G E + L+ M EGV + +++S+LS CA LA+L GR+ H +
Sbjct: 74 AWNSVINGFALNGKPNEALTLYKRMGSEGVEPDGFTMVSLLSACAELATLVLGRRAHVYM 133
Query: 254 VRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFA-SKDIVMWNSIISGYAQYGLGEKS 312
V+ + +++ + L+ +Y KCG + + + IFD +++V W S+I G A G G+++
Sbjct: 134 VKVGLNKNLHANNALLDLYAKCGTISEARKIFDEMGIERNVVSWTSLIVGLAVNGFGKEA 193
Query: 313 LKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVD 372
L+ F +M G++P ++T VGVL ACS+ G V EG E F+ MK +Y + P+ EHY CMVD
Sbjct: 194 LEHFKDMEREGLVPSEITFVGVLYACSHCGIVNEGFEYFKRMKEQYDIVPRIEHYGCMVD 253
Query: 373 LLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGP 432
LLGRAG +++A I+ MP +P+A+IW +LLGAC H L L A +LLQLEPK++G
Sbjct: 254 LLGRAGLLKEAYDYIQDMPLQPNAVIWRTLLGACTIHGHLGLGAFARARLLQLEPKDSGD 313
Query: 433 YILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPM 492
Y+LLSN+YAS+ R+ DV E+R+ M V K PG S +E+ VH F D +HP+
Sbjct: 314 YVLLSNLYASEQRWSDVHEVRRTMLSEGVRKTPGYSLVELGNHVHEFVMGD-RTHPQSEA 372
Query: 493 IMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIR 552
I +ML ++ L+ AGY P ++ VL D++EEEK +L YHSEK+A+A+ L+ G PIR
Sbjct: 373 IYKMLVEMAMKLKLAGYVPHTANVLADIEEEEKESALFYHSEKIAIAFMLINTLPGTPIR 432
Query: 553 VMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
++KNLRVC DCH AIKLISKV R+I++RD +RFHHF+DG CSCRDYW
Sbjct: 433 IIKNLRVCADCHFAIKLISKVFERDIVVRDCSRFHHFRDGSCSCRDYW 480
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 106/222 (47%), Gaps = 46/222 (20%)
Query: 79 CQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLM 138
C G ++ ++FDEMP K+ ++ TMI+ Y + A K+FE+MPEK+ V+W +++
Sbjct: 26 CVVGDLNLACKLFDEMPHKDTVTLDTMITAY-----FESAYKVFELMPEKDIVAWNSVIN 80
Query: 139 GYTQCGRIQDAWELFKAMPM---------------------------------------K 159
G+ G+ +A L+K M K
Sbjct: 81 GFALNGKPNEALTLYKRMGSEGVEPDGFTMVSLLSACAELATLVLGRRAHVYMVKVGLNK 140
Query: 160 SVVASNSMILGLGQNGEVQKARVVFDQMR-EKDDATWSGMIKVYERKGYELEVIDLFTLM 218
++ A+N+++ + G + +AR +FD+M E++ +W+ +I G+ E ++ F M
Sbjct: 141 NLHANNALLDLYAKCGTISEARKIFDEMGIERNVVSWTSLIVGLAVNGFGKEALEHFKDM 200
Query: 219 QKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDV 260
++EG+ + + + VL C+ ++ G + ++ + Q+D+
Sbjct: 201 EREGLVPSEITFVGVLYACSHCGIVNEGFEYFKRM-KEQYDI 241
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 108/215 (50%), Gaps = 18/215 (8%)
Query: 20 GMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYC 79
G + A LF +MP K+ V+ M+ + + A ++F++MPEKD+VA +++ G+
Sbjct: 29 GDLNLACKLFDEMPHKDTVTLDTMITAYF-----ESAYKVFELMPEKDIVAWNSVINGFA 83
Query: 80 QDGRVDEGREIFDEMPKKNV----ISWTTMISGYVNNNRIDVARK----LFEVMPEKNEV 131
+G+ +E ++ M + V + +++S + + R+ + +V KN
Sbjct: 84 LNGKPNEALTLYKRMGSEGVEPDGFTMVSLLSACAELATLVLGRRAHVYMVKVGLNKNLH 143
Query: 132 SWTAMLMGYTQCGRIQDAWELFKAMPM-KSVVASNSMILGLGQNGEVQKARVVFDQMREK 190
+ A+L Y +CG I +A ++F M + ++VV+ S+I+GL NG ++A F M +
Sbjct: 144 ANNALLDLYAKCGTISEARKIFDEMGIERNVVSWTSLIVGLAVNGFGKEALEHFKDMERE 203
Query: 191 ----DDATWSGMIKVYERKGYELEVIDLFTLMQKE 221
+ T+ G++ G E + F M+++
Sbjct: 204 GLVPSEITFVGVLYACSHCGIVNEGFEYFKRMKEQ 238
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 87/169 (51%), Gaps = 13/169 (7%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV----VSWTVMLGGFIRDSRIDDA 56
MPE+++V+W +++ G+ G EA TL+ +M + V + +L + +
Sbjct: 67 MPEKDIVAWNSVINGFALNGKPNEALTLYKRMGSEGVEPDGFTMVSLLSACAELATLVLG 126
Query: 57 RRLFDMMPE----KDVVAQTNMVLGYCQDGRVDEGREIFDEMP-KKNVISWTTMISGYVN 111
RR M + K++ A ++ Y + G + E R+IFDEM ++NV+SWT++I G
Sbjct: 127 RRAHVYMVKVGLNKNLHANNALLDLYAKCGTISEARKIFDEMGIERNVVSWTSLIVGLAV 186
Query: 112 NNRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAM 156
N A + F+ M + +E+++ +L + CG + + +E FK M
Sbjct: 187 NGFGKEALEHFKDMEREGLVPSEITFVGVLYACSHCGIVNEGFEYFKRM 235
>gi|297596302|ref|NP_001042337.2| Os01g0205200 [Oryza sativa Japonica Group]
gi|56201494|dbj|BAD72991.1| pentatricopeptide repeat protein -like [Oryza sativa Japonica
Group]
gi|255672984|dbj|BAF04251.2| Os01g0205200 [Oryza sativa Japonica Group]
Length = 658
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 225/638 (35%), Positives = 344/638 (53%), Gaps = 49/638 (7%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMM----PE 65
A++ Y + I +A +F +MP+++++SW ++GG + D A LF M E
Sbjct: 23 NALISFYAKSNRIEDALMVFDEMPQRDIISWNSIIGGCASNGLYDKAVELFVRMWLEGQE 82
Query: 66 KDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTM----ISGYVNNNRIDVARKL 121
D +++ Q G + + +IS T++ + Y N + K+
Sbjct: 83 LDSTTLLSVMPACVQSHYSFIGGVVHGYSVRTGLISETSLGNALLDMYSNCSDWRSTNKI 142
Query: 122 FEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKS----VVASNSMILGLGQN--- 174
F M +KN VSWTAM+ YT+ G LF+ M ++ V A S + N
Sbjct: 143 FRNMEQKNVVSWTAMITSYTRAGHFDKVAGLFQEMGLEGIRPDVFAITSALDAFAGNESL 202
Query: 175 --------------------------------GEVQKARVVFDQMREKDDATWSGMIKVY 202
G +++AR +FD + +KD +W+ +I Y
Sbjct: 203 KHGKSVHGYAIRNGIEEVLPVANALMEMYVKCGYMEEARFIFDHVTKKDTISWNTLIGGY 262
Query: 203 ERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDV 262
R E LF M + +R N ++ +L ASL+SL+ GR++HA VR + D
Sbjct: 263 SRSNLANEAFTLFNEMLLQ-LRPNAVTMACILPAAASLSSLERGREMHAYAVRRGYLEDN 321
Query: 263 YVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSS 322
+VA+ L+ MY+KCG L+ + +FD +K+++ W +I+GY +G G ++ +F +M S
Sbjct: 322 FVANALVDMYVKCGALLLARRLFDMLTNKNLISWTIMIAGYGMHGRGRDAIALFEQMKGS 381
Query: 323 GVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVED 382
G+ PD + +L ACS++G EG F +M++++ +EPK +HYACMVDLL G +++
Sbjct: 382 GIQPDAGSFSAILYACSHSGLRDEGWRFFNAMRNEHRIEPKLKHYACMVDLLCHTGNLKE 441
Query: 383 AMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYAS 442
A + IE MP EPD+ IW SLL CR H + LAE A+ + +LEP+N G Y+LL+NIYA
Sbjct: 442 AYEFIETMPIEPDSSIWVSLLRGCRIHRNVKLAEKVAEMVFELEPENTGYYVLLANIYAE 501
Query: 443 QGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGG 502
R+ V +L+ + R + + GCSWIEV K H+F + +HP+ I L+ +
Sbjct: 502 AERWEAVRKLKNKVGGRGLRENTGCSWIEVRGKAHIFFAEN-RNHPQGMRIAEFLDDVAR 560
Query: 503 LLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGD 562
++E G+ P + L D+ +L HS KLAVA+G++ L +G PIRV KN RVC
Sbjct: 561 RMQEEGHDPKKKYALMGADDAVHDEALCGHSSKLAVAFGVLNLSQGRPIRVTKNSRVCSH 620
Query: 563 CHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
CH A K ISK+ GREIILRD+NRFHHF++G CSCR YW
Sbjct: 621 CHEAAKFISKMCGREIILRDSNRFHHFEEGRCSCRGYW 658
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 119/263 (45%), Gaps = 19/263 (7%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMP----EKNVVSWTVMLGGFIRDSRIDDA 56
M ++NVVSWTAM+ Y G + LF +M +V + T L F + +
Sbjct: 146 MEQKNVVSWTAMITSYTRAGHFDKVAGLFQEMGLEGIRPDVFAITSALDAFAGNESLKHG 205
Query: 57 RRLFDMMPEKDV-----VAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVN 111
+ + + VA M + Y + G ++E R IFD + KK+ ISW T+I GY
Sbjct: 206 KSVHGYAIRNGIEEVLPVANALMEM-YVKCGYMEEARFIFDHVTKKDTISWNTLIGGYSR 264
Query: 112 NNRIDVARKLFEVM---PEKNEVSWTAML-----MGYTQCGRIQDAWELFKAMPMKSVVA 163
+N + A LF M N V+ +L + + GR A+ + + + VA
Sbjct: 265 SNLANEAFTLFNEMLLQLRPNAVTMACILPAAASLSSLERGREMHAYAVRRGYLEDNFVA 324
Query: 164 SNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGV 223
N+++ + G + AR +FD + K+ +W+ MI Y G + I LF M+ G+
Sbjct: 325 -NALVDMYVKCGALLLARRLFDMLTNKNLISWTIMIAGYGMHGRGRDAIALFEQMKGSGI 383
Query: 224 RVNFPSLISVLSVCASLASLDHG 246
+ + S ++L C+ D G
Sbjct: 384 QPDAGSFSAILYACSHSGLRDEG 406
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 80/198 (40%), Gaps = 43/198 (21%)
Query: 246 GRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQ 305
G VH LV+ F V + LI+ Y K + ++FD +DI+ WNSII G A
Sbjct: 3 GLVVHGYLVKYGFGAQCAVCNALISFYAKSNRIEDALMVFDEMPQRDIISWNSIIGGCAS 62
Query: 306 YGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSAC-----SYTGKVKEG------------- 347
GL +K++++F M+ G D TL+ V+ AC S+ G V G
Sbjct: 63 NGLYDKAVELFVRMWLEGQELDSTTLLSVMPACVQSHYSFIGGVVHGYSVRTGLISETSL 122
Query: 348 -----------------REIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAM 390
+IF +M+ K +V + M+ RAG + L + M
Sbjct: 123 GNALLDMYSNCSDWRSTNKIFRNMEQKNVVS-----WTAMITSYTRAGHFDKVAGLFQEM 177
Query: 391 PFE---PDAIIWGSLLGA 405
E PD S L A
Sbjct: 178 GLEGIRPDVFAITSALDA 195
>gi|413923916|gb|AFW63848.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
Length = 1174
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 218/643 (33%), Positives = 358/643 (55%), Gaps = 53/643 (8%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDA-RRLFDMMPEKDV 68
TA++ Y+ A +F +MP ++VV+W ML G+ A L DM +
Sbjct: 139 TALIDLYIRCARFGPARNVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGL 198
Query: 69 VAQTNMVLGY----CQDGRVDEGREIFD-------EMPKKNVISWTTMISGYVNNNRIDV 117
+ ++ Q G + +G I E ++ V+ T ++ Y ++
Sbjct: 199 RPNASTLVSLLPLLAQHGALFQGTSIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVY 258
Query: 118 ARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSV---------------- 161
A ++F MP +N+V+W+A++ G+ C R+ +A+ LFK M ++ +
Sbjct: 259 ACRVFHGMPVRNDVTWSALIGGFVLCDRMTEAFNLFKDMLVEGLCFLSATSVASALRVCA 318
Query: 162 ------------------------VASNSMILGLGQNGEVQKARVVFDQMREKDDATWSG 197
ASNS++ + G + +A + FD++ KD ++
Sbjct: 319 SLADLHMGTQLHALIAKSGIHADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTISYGA 378
Query: 198 MIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQ 257
++ + G E +F MQ + + +++S++ C+ LA+L HG+ H ++
Sbjct: 379 LLSGCVQNGKAEEAFLVFKKMQACNMEPDIATMVSLIPACSHLAALQHGKCSHGSVIIRG 438
Query: 258 FDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFH 317
++ + + LI MY KCG++ + +FD ++D+V WN++I+GY +GLG+++ +F
Sbjct: 439 LALETSICNSLIDMYAKCGKIDLSRQVFDKMPARDVVSWNTMIAGYGIHGLGKEATTLFL 498
Query: 318 EMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRA 377
M + G PDDVT + +++ACS++G V EG+ F++M KY + P+ EHY CMVDLL R
Sbjct: 499 GMKNQGFAPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARG 558
Query: 378 GQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLS 437
G +++A + I++MP + D +WG+LLGACR H +DL + ++ + +L P+ G ++LLS
Sbjct: 559 GLLDEAYQFIQSMPLKADVRVWGALLGACRIHKNIDLGKQVSRIIQKLGPEGTGNFVLLS 618
Query: 438 NIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRML 497
NI+++ GRF + AE+R + + K PG SWIE+ +H F G D SHP I L
Sbjct: 619 NIFSAAGRFDEAAEVRIIQKVKGFKKSPGYSWIEINGSLHAFVGGD-QSHPCSRDIYHEL 677
Query: 498 EKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNL 557
+ I +++ GY D+SFVL D++EEEK +L YHSEKLA+A+G++ L E I V KNL
Sbjct: 678 DNIMVDIKKLGYQADTSFVLQDLEEEEKEKALLYHSEKLAIAFGVLSLNEDKTIFVTKNL 737
Query: 558 RVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
RVCGDCH+AIK ++ V R II+RD NRFHHFK+G CSC ++W
Sbjct: 738 RVCGDCHTAIKYMTLVRNRTIIVRDTNRFHHFKNGQCSCGNFW 780
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 114/235 (48%), Gaps = 6/235 (2%)
Query: 175 GEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVL 234
G++ AR VFD++ D ++ +I+ Y G IDL+ M + V N + VL
Sbjct: 48 GQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVL 107
Query: 235 SVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIV 294
C++L L GR +HA D++V++ LI +YI+C + +F +D+V
Sbjct: 108 KACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVV 167
Query: 295 MWNSIISGYAQYGLGEKSLKVFHEMFS-SGVMPDDVTLVGVLSACSYTGKVKEGREIFES 353
WN++++GYA +G+ ++ +M G+ P+ TLV +L + G + +G I +
Sbjct: 168 AWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSI-HA 226
Query: 354 MKSKYLVEPKTEHY---ACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
+ +E E ++D+ + Q+ A ++ MP D + W +L+G
Sbjct: 227 YCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRND-VTWSALIGG 280
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 89/410 (21%), Positives = 173/410 (42%), Gaps = 75/410 (18%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF-D 61
E V+ TA++ Y + + A +F MP +N V+W+ ++GGF+ R+ +A LF D
Sbjct: 237 EEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDRMTEAFNLFKD 296
Query: 62 MMPE---------------------------------------KDVVAQTNMVLGYCQDG 82
M+ E D+ A +++ Y + G
Sbjct: 297 MLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTASNSLLSMYAKAG 356
Query: 83 RVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKN-EVSWTAML---- 137
++E FDE+ K+ IS+ ++SG V N + + A +F+ M N E M+
Sbjct: 357 LINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNMEPDIATMVSLIP 416
Query: 138 ----MGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDA 193
+ Q G+ + + + +++ + NS+I + G++ +R VFD+M +D
Sbjct: 417 ACSHLAALQHGKCSHGSVIIRGLALETSIC-NSLIDMYAKCGKIDLSRQVFDKMPARDVV 475
Query: 194 TWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQL 253
+W+ MI Y G E LF M+ +G + + I +++ C+ + G+
Sbjct: 476 SWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAACSHSGLVTEGKH----- 530
Query: 254 VRCQFDVDVYVASVLITM--YIKCGELV-KGKLIFDNFA-------SKDIVMWNSIISG- 302
FD + +L M YI +L+ +G L+ + + D+ +W +++
Sbjct: 531 ---WFDTMTHKYGILPRMEHYICMVDLLARGGLLDEAYQFIQSMPLKADVRVWGALLGAC 587
Query: 303 --YAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREI 350
+ LG++ ++ ++ G + V L + SA G+ E E+
Sbjct: 588 RIHKNIDLGKQVSRIIQKLGPEGT-GNFVLLSNIFSA---AGRFDEAAEV 633
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 73/165 (44%), Gaps = 13/165 (7%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV----VSWTVMLGGFIRDSRIDDA 56
MP R+VVSW M+ GY G+ EA TLF M + V++ ++ + +
Sbjct: 469 MPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAACSHSGLVTEG 528
Query: 57 RRLFDMMPEKDVVAQ-----TNMVLGYCQDGRVDEGREIFDEMP-KKNVISWTTMISGYV 110
+ FD M K + MV + G +DE + MP K +V W ++
Sbjct: 529 KHWFDTMTHKYGILPRMEHYICMVDLLARGGLLDEAYQFIQSMPLKADVRVWGALLGACR 588
Query: 111 NNNRIDVARKLFEVMPEKN-EVSWTAMLMG--YTQCGRIQDAWEL 152
+ ID+ +++ ++ + E + +L+ ++ GR +A E+
Sbjct: 589 IHKNIDLGKQVSRIIQKLGPEGTGNFVLLSNIFSAAGRFDEAAEV 633
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 61/143 (42%), Gaps = 6/143 (4%)
Query: 269 ITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDD 328
+ +I G+L + +FD + D +N++I Y+ G ++ ++ M V P+
Sbjct: 41 LEQHISRGQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNK 100
Query: 329 VTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHY--ACMVDLLGRAGQVEDAMKL 386
T VL ACS ++ GR I + L T+ + ++DL R + A +
Sbjct: 101 YTFPFVLKACSALVDLRAGRTIHAHAAAAGL---HTDLFVSTALIDLYIRCARFGPARNV 157
Query: 387 IEAMPFEPDAIIWGSLLGACRTH 409
MP D + W ++L H
Sbjct: 158 FAKMPMR-DVVAWNAMLAGYANH 179
>gi|356528130|ref|XP_003532658.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Glycine max]
Length = 674
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 218/569 (38%), Positives = 347/569 (60%), Gaps = 15/569 (2%)
Query: 43 MLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISW 102
+L + + + A LFD MP +++++ M+ Y G ++ + +FDEMP +NV +W
Sbjct: 110 LLNLYSKFGELQAAVALFDRMPRRNIMSCNIMIKAYLGMGNLESAKNLFDEMPDRNVATW 169
Query: 103 TTMISGYVNNNRIDVARKLFEVMPE----KNEVSWTAMLMGYTQCGRIQDAWELFKAMPM 158
M++G + A LF M E +E S ++L G G + A + A M
Sbjct: 170 NAMVTGLTKFEMNEEALLLFSRMNELSFMPDEYSLGSVLRGCAHLGALL-AGQQVHAYVM 228
Query: 159 KSVVASNSMILGLG------QNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVI 212
K N +++G + G + V + M + W+ ++ +KGY V+
Sbjct: 229 KCGFECN-LVVGCSLAHMYMKAGSMHDGERVINWMPDCSLVAWNTLMSGKAQKGYFEGVL 287
Query: 213 DLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMY 272
D + +M+ G R + + +SV+S C+ LA L G+Q+HA+ V+ +V V S L++MY
Sbjct: 288 DQYCMMKMAGFRPDKITFVSVISSCSELAILCQGKQIHAEAVKAGASSEVSVVSSLVSMY 347
Query: 273 IKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLV 332
+CG L F +D+V+W+S+I+ Y +G GE+++K+F+EM + +++T +
Sbjct: 348 SRCGCLQDSIKTFLECKERDVVLWSSMIAAYGFHGQGEEAIKLFNEMEQENLPGNEITFL 407
Query: 333 GVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPF 392
+L ACS+ G +G +F+ M KY ++ + +HY C+VDLLGR+G +E+A +I +MP
Sbjct: 408 SLLYACSHCGLKDKGLGLFDMMVKKYGLKARLQHYTCLVDLLGRSGCLEEAEAMIRSMPV 467
Query: 393 EPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAEL 452
+ DAIIW +LL AC+ H ++A A ++L+++P+++ Y+LL+NIY+S R+ +V+E+
Sbjct: 468 KADAIIWKTLLSACKIHKNAEIARRVADEVLRIDPQDSASYVLLANIYSSANRWQNVSEV 527
Query: 453 RKNMRKRNVIKPPGCSWIEVEKKVHMF-TGRDCVSHPEHPMIMRMLEKIGGLLREAGYCP 511
R+ M+ + V K PG SW+EV+ +VH F G +C HP+H I + LE++ ++ GY P
Sbjct: 528 RRAMKDKMVKKEPGISWVEVKNQVHQFHMGDEC--HPKHVEINQYLEELTSEIKRQGYVP 585
Query: 512 DSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLIS 571
D+S VLHD+D EEK LR+HSEKLA+A+ L+ PEGVPIRVMKNLRVC DCH AIK IS
Sbjct: 586 DTSSVLHDMDNEEKEQILRHHSEKLAIAFALMNTPEGVPIRVMKNLRVCSDCHVAIKYIS 645
Query: 572 KVMGREIILRDANRFHHFKDGLCSCRDYW 600
++ EII+RD++RFHHFK+G CSC DYW
Sbjct: 646 EIKKLEIIVRDSSRFHHFKNGTCSCGDYW 674
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 89/411 (21%), Positives = 172/411 (41%), Gaps = 60/411 (14%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MP RN++S M++ Y+ G + A LF +MP++NV +W M+ G + ++A LF
Sbjct: 130 MPRRNIMSCNIMIKAYLGMGNLESAKNLFDEMPDRNVATWNAMVTGLTKFEMNEEALLLF 189
Query: 61 DMMPE----KDVVAQTNMVLGYCQDGRVDEGREIFDEMPK----KNVISWTTMISGYVNN 112
M E D + +++ G G + G+++ + K N++ ++ Y+
Sbjct: 190 SRMNELSFMPDEYSLGSVLRGCAHLGALLAGQQVHAYVMKCGFECNLVVGCSLAHMYMKA 249
Query: 113 NRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMK----------SVV 162
+ ++ MP+ + V+W ++ G Q G + + + M M SV+
Sbjct: 250 GSMHDGERVINWMPDCSLVAWNTLMSGKAQKGYFEGVLDQYCMMKMAGFRPDKITFVSVI 309
Query: 163 ASNSMILGLGQNGEVQKARV-----------------------------VFDQMREKDDA 193
+S S + L Q ++ V F + +E+D
Sbjct: 310 SSCSELAILCQGKQIHAEAVKAGASSEVSVVSSLVSMYSRCGCLQDSIKTFLECKERDVV 369
Query: 194 TWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQL 253
WS MI Y G E I LF M++E + N + +S+L C+ D G + +
Sbjct: 370 LWSSMIAAYGFHGQGEEAIKLFNEMEQENLPGNEITFLSLLYACSHCGLKDKGLGLFDMM 429
Query: 254 VRCQFDVDVYVA--SVLITMYIKCGELVKGKLIFDNFASK-DIVMWNSIISGYAQYGLGE 310
V+ ++ + + + L+ + + G L + + + + K D ++W +++S + E
Sbjct: 430 VK-KYGLKARLQHYTCLVDLLGRSGCLEEAEAMIRSMPVKADAIIWKTLLSACKIHKNAE 488
Query: 311 KSLKVFHEMFSSGVMPDD----VTLVGVLSACSYTGKVKEGREIFESMKSK 357
+ +V E+ + P D V L + S+ + V E R +MK K
Sbjct: 489 IARRVADEVLR--IDPQDSASYVLLANIYSSANRWQNVSEVR---RAMKDK 534
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 98/233 (42%), Gaps = 46/233 (19%)
Query: 216 TLMQKEGVRVNFPSLIS-----------VLSVCASLASLDHGRQVHAQLVRCQFDVDVYV 264
TL K +R F S +S +L C L S+ G+Q+H+ + D ++
Sbjct: 47 TLCSKGHIREAFESFLSEIWAEPRLFSNLLQACIPLKSVSLGKQLHSLIFTSGCSSDKFI 106
Query: 265 ASVLITMYIKCGELV-------------------------------KGKLIFDNFASKDI 293
++ L+ +Y K GEL K +FD +++
Sbjct: 107 SNHLLNLYSKFGELQAAVALFDRMPRRNIMSCNIMIKAYLGMGNLESAKNLFDEMPDRNV 166
Query: 294 VMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFES 353
WN++++G ++ + E++L +F M MPD+ +L VL C++ G + G+++
Sbjct: 167 ATWNAMVTGLTKFEMNEEALLLFSRMNELSFMPDEYSLGSVLRGCAHLGALLAGQQVHAY 226
Query: 354 -MKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
MK + E + + +AG + D ++I MP + + W +L+
Sbjct: 227 VMKCGF--ECNLVVGCSLAHMYMKAGSMHDGERVINWMP-DCSLVAWNTLMSG 276
>gi|413923915|gb|AFW63847.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
Length = 1274
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 218/643 (33%), Positives = 358/643 (55%), Gaps = 53/643 (8%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDA-RRLFDMMPEKDV 68
TA++ Y+ A +F +MP ++VV+W ML G+ A L DM +
Sbjct: 139 TALIDLYIRCARFGPARNVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGL 198
Query: 69 VAQTNMVLGY----CQDGRVDEGREIFD-------EMPKKNVISWTTMISGYVNNNRIDV 117
+ ++ Q G + +G I E ++ V+ T ++ Y ++
Sbjct: 199 RPNASTLVSLLPLLAQHGALFQGTSIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVY 258
Query: 118 ARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSV---------------- 161
A ++F MP +N+V+W+A++ G+ C R+ +A+ LFK M ++ +
Sbjct: 259 ACRVFHGMPVRNDVTWSALIGGFVLCDRMTEAFNLFKDMLVEGLCFLSATSVASALRVCA 318
Query: 162 ------------------------VASNSMILGLGQNGEVQKARVVFDQMREKDDATWSG 197
ASNS++ + G + +A + FD++ KD ++
Sbjct: 319 SLADLHMGTQLHALIAKSGIHADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTISYGA 378
Query: 198 MIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQ 257
++ + G E +F MQ + + +++S++ C+ LA+L HG+ H ++
Sbjct: 379 LLSGCVQNGKAEEAFLVFKKMQACNMEPDIATMVSLIPACSHLAALQHGKCSHGSVIIRG 438
Query: 258 FDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFH 317
++ + + LI MY KCG++ + +FD ++D+V WN++I+GY +GLG+++ +F
Sbjct: 439 LALETSICNSLIDMYAKCGKIDLSRQVFDKMPARDVVSWNTMIAGYGIHGLGKEATTLFL 498
Query: 318 EMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRA 377
M + G PDDVT + +++ACS++G V EG+ F++M KY + P+ EHY CMVDLL R
Sbjct: 499 GMKNQGFAPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARG 558
Query: 378 GQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLS 437
G +++A + I++MP + D +WG+LLGACR H +DL + ++ + +L P+ G ++LLS
Sbjct: 559 GLLDEAYQFIQSMPLKADVRVWGALLGACRIHKNIDLGKQVSRIIQKLGPEGTGNFVLLS 618
Query: 438 NIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRML 497
NI+++ GRF + AE+R + + K PG SWIE+ +H F G D SHP I L
Sbjct: 619 NIFSAAGRFDEAAEVRIIQKVKGFKKSPGYSWIEINGSLHAFVGGD-QSHPCSRDIYHEL 677
Query: 498 EKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNL 557
+ I +++ GY D+SFVL D++EEEK +L YHSEKLA+A+G++ L E I V KNL
Sbjct: 678 DNIMVDIKKLGYQADTSFVLQDLEEEEKEKALLYHSEKLAIAFGVLSLNEDKTIFVTKNL 737
Query: 558 RVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
RVCGDCH+AIK ++ V R II+RD NRFHHFK+G CSC ++W
Sbjct: 738 RVCGDCHTAIKYMTLVRNRTIIVRDTNRFHHFKNGQCSCGNFW 780
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 114/234 (48%), Gaps = 6/234 (2%)
Query: 175 GEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVL 234
G++ AR VFD++ D ++ +I+ Y G IDL+ M + V N + VL
Sbjct: 48 GQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVL 107
Query: 235 SVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIV 294
C++L L GR +HA D++V++ LI +YI+C + +F +D+V
Sbjct: 108 KACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVV 167
Query: 295 MWNSIISGYAQYGLGEKSLKVFHEMFS-SGVMPDDVTLVGVLSACSYTGKVKEGREIFES 353
WN++++GYA +G+ ++ +M G+ P+ TLV +L + G + +G I +
Sbjct: 168 AWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSI-HA 226
Query: 354 MKSKYLVEPKTEHY---ACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLG 404
+ +E E ++D+ + Q+ A ++ MP D + W +L+G
Sbjct: 227 YCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRND-VTWSALIG 279
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 89/410 (21%), Positives = 173/410 (42%), Gaps = 75/410 (18%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF-D 61
E V+ TA++ Y + + A +F MP +N V+W+ ++GGF+ R+ +A LF D
Sbjct: 237 EEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDRMTEAFNLFKD 296
Query: 62 MMPE---------------------------------------KDVVAQTNMVLGYCQDG 82
M+ E D+ A +++ Y + G
Sbjct: 297 MLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTASNSLLSMYAKAG 356
Query: 83 RVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKN-EVSWTAML---- 137
++E FDE+ K+ IS+ ++SG V N + + A +F+ M N E M+
Sbjct: 357 LINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNMEPDIATMVSLIP 416
Query: 138 ----MGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDA 193
+ Q G+ + + + +++ + NS+I + G++ +R VFD+M +D
Sbjct: 417 ACSHLAALQHGKCSHGSVIIRGLALETSIC-NSLIDMYAKCGKIDLSRQVFDKMPARDVV 475
Query: 194 TWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQL 253
+W+ MI Y G E LF M+ +G + + I +++ C+ + G+
Sbjct: 476 SWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAACSHSGLVTEGKH----- 530
Query: 254 VRCQFDVDVYVASVLITM--YIKCGELV-KGKLIFDNFA-------SKDIVMWNSIISG- 302
FD + +L M YI +L+ +G L+ + + D+ +W +++
Sbjct: 531 ---WFDTMTHKYGILPRMEHYICMVDLLARGGLLDEAYQFIQSMPLKADVRVWGALLGAC 587
Query: 303 --YAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREI 350
+ LG++ ++ ++ G + V L + SA G+ E E+
Sbjct: 588 RIHKNIDLGKQVSRIIQKLGPEGT-GNFVLLSNIFSA---AGRFDEAAEV 633
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 61/143 (42%), Gaps = 6/143 (4%)
Query: 269 ITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDD 328
+ +I G+L + +FD + D +N++I Y+ G ++ ++ M V P+
Sbjct: 41 LEQHISRGQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNK 100
Query: 329 VTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHY--ACMVDLLGRAGQVEDAMKL 386
T VL ACS ++ GR I + L T+ + ++DL R + A +
Sbjct: 101 YTFPFVLKACSALVDLRAGRTIHAHAAAAGL---HTDLFVSTALIDLYIRCARFGPARNV 157
Query: 387 IEAMPFEPDAIIWGSLLGACRTH 409
MP D + W ++L H
Sbjct: 158 FAKMPMR-DVVAWNAMLAGYANH 179
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 75/165 (45%), Gaps = 13/165 (7%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV----VSWTVMLGGFIRDSRIDDA 56
MP R+VVSW M+ GY G+ EA TLF M + V++ ++ + +
Sbjct: 469 MPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAACSHSGLVTEG 528
Query: 57 RRLFDMMPEK-DVVAQTN----MVLGYCQDGRVDEGREIFDEMP-KKNVISWTTMISGYV 110
+ FD M K ++ + MV + G +DE + MP K +V W ++
Sbjct: 529 KHWFDTMTHKYGILPRMEHYICMVDLLARGGLLDEAYQFIQSMPLKADVRVWGALLGACR 588
Query: 111 NNNRIDVARKLFEVMPEKN-EVSWTAMLMG--YTQCGRIQDAWEL 152
+ ID+ +++ ++ + E + +L+ ++ GR +A E+
Sbjct: 589 IHKNIDLGKQVSRIIQKLGPEGTGNFVLLSNIFSAAGRFDEAAEV 633
>gi|297804050|ref|XP_002869909.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297315745|gb|EFH46168.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 595
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 216/525 (41%), Positives = 322/525 (61%), Gaps = 12/525 (2%)
Query: 87 GREIFDEMPKK-NVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGY--TQC 143
++F ++ K NV W T+I GY A L+ M V +
Sbjct: 72 AHKVFSKIEKPINVFIWNTLIRGYAEIGNSVSAVSLYREMRASGFVEPDTHTYPFLLKAV 131
Query: 144 GRIQDA--WELFKAMPMKS-----VVASNSMILGLGQNGEVQKARVVFDQMREKDDATWS 196
G++ D E ++ ++S + NS++ G+V A VFD+M EKD W+
Sbjct: 132 GKMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWN 191
Query: 197 GMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRC 256
+I + G E + L+T M +G++ + +++S+LS CA + +L G++ H +++
Sbjct: 192 SVINGFAENGKPEEALALYTEMDLKGIKPDGFTIVSLLSACAKIGALTLGKRFHVYMIKV 251
Query: 257 QFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVF 316
+++ ++VL+ +Y +CG + + K +FD K+ V W S+I G A GLG++++++F
Sbjct: 252 GLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGLGKEAIELF 311
Query: 317 HEMFSS-GVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLG 375
M S G++P ++T VG+L ACS+ G VKEG E F M +Y +EP+ EH+ CMVDLL
Sbjct: 312 KNMESKEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMSEEYKIEPRIEHFGCMVDLLA 371
Query: 376 RAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYIL 435
RAGQV+ A + I MP +P+ +IW +LLGAC H DLAE+A K+LQLEP ++G Y+L
Sbjct: 372 RAGQVKKAYEYILKMPMQPNVVIWRTLLGACTVHGDSDLAELARMKILQLEPNHSGDYVL 431
Query: 436 LSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMR 495
LSN+YAS+ R+ DV ++RK M + V K PG S +EV +VH F D SHP++ MI
Sbjct: 432 LSNMYASEQRWSDVQKIRKQMLRDGVRKVPGHSLVEVGNRVHEFLMGD-KSHPQNDMIYA 490
Query: 496 MLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMK 555
L+++ LR GY P S V DV+EEEK ++L YHSEK+A+A+ L+ PE PIRV+K
Sbjct: 491 KLKEMTDRLRLEGYVPQISNVYVDVEEEEKENALVYHSEKIAIAFMLISTPERWPIRVVK 550
Query: 556 NLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
NL+VC DCH AIKL+SKV REI++RD +RFHHFK+G CSC+DYW
Sbjct: 551 NLKVCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/328 (20%), Positives = 152/328 (46%), Gaps = 30/328 (9%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQM-------PEKNVVSWTVMLGGFIRDSRIDDA- 56
NV W ++RGY E G A +L+ +M P+ + + + G + D R+ +
Sbjct: 84 NVFIWNTLIRGYAEIGNSVSAVSLYREMRASGFVEPDTHTYPFLLKAVGKMADVRLGETI 143
Query: 57 -----RRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVN 111
R F + + Q +++ Y G V ++FD+MP+K++++W ++I+G+
Sbjct: 144 HSVVIRSGFGSL----IYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAE 199
Query: 112 NNRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWE----LFKAMPMKSVVA 163
N + + A L+ M K + + ++L + G + + K +++ +
Sbjct: 200 NGKPEEALALYTEMDLKGIKPDGFTIVSLLSACAKIGALTLGKRFHVYMIKVGLTRNLHS 259
Query: 164 SNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQ-KEG 222
SN ++ + G V++A+ +FD+M +K+ +W+ +I G E I+LF M+ KEG
Sbjct: 260 SNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGLGKEAIELFKNMESKEG 319
Query: 223 VRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVA--SVLITMYIKCGELVK 280
+ + + +L C+ + G + ++ ++ ++ + ++ + + G++ K
Sbjct: 320 LLPCEITFVGILYACSHCGMVKEGFEYFRRMSE-EYKIEPRIEHFGCMVDLLARAGQVKK 378
Query: 281 G-KLIFDNFASKDIVMWNSIISGYAQYG 307
+ I ++V+W +++ +G
Sbjct: 379 AYEYILKMPMQPNVVIWRTLLGACTVHG 406
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 100/198 (50%), Gaps = 18/198 (9%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV----VSWTVMLGGFIRDSRIDDA 56
MPE+++V+W +++ G+ E G EA L+ +M K + + +L + +
Sbjct: 182 MPEKDLVAWNSVINGFAENGKPEEALALYTEMDLKGIKPDGFTIVSLLSACAKIGALTLG 241
Query: 57 RRLFDMMPEKDV---VAQTNMVLG-YCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+R M + + + +N++L Y + GRV+E + +FDEM KN +SWT++I G N
Sbjct: 242 KRFHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVN 301
Query: 113 NRIDVARKLFEVMPEKN-----EVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVAS--- 164
A +LF+ M K E+++ +L + CG +++ +E F+ M + +
Sbjct: 302 GLGKEAIELFKNMESKEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMSEEYKIEPRIE 361
Query: 165 --NSMILGLGQNGEVQKA 180
M+ L + G+V+KA
Sbjct: 362 HFGCMVDLLARAGQVKKA 379
>gi|297736155|emb|CBI24193.3| unnamed protein product [Vitis vinifera]
Length = 1083
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 229/675 (33%), Positives = 357/675 (52%), Gaps = 89/675 (13%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVV 69
TA+V Y G++ A LF +MP+ NVVSWT ++ G+ + ++ M ++ V
Sbjct: 414 TALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVS 473
Query: 70 AQTNM--------------VLGYCQDGR-------------------------VDEGREI 90
N VLGY G V+E +
Sbjct: 474 GNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYV 533
Query: 91 FDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPE-KNEVSWTA-------------- 135
FD M + ++ISW MIS Y ++ + + F M NE + T
Sbjct: 534 FDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNL 593
Query: 136 ------------------------MLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGL 171
+L Y++ GR +DA +F+AM + +++ NSM+
Sbjct: 594 KWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACY 653
Query: 172 GQNGEVQKARVVFD---QMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFP 228
Q+G+ + QM + D TW+ +I + E + + L++++G+ N+
Sbjct: 654 VQDGKCLDGLKILAELLQMGKPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYI 713
Query: 229 SLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNF 288
+++S L+ A+LA L+ G+Q+H +++ F+ D++V + + MY KCGE+ +
Sbjct: 714 TMVS-LAATANLAVLEEGQQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQP 772
Query: 289 ASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGR 348
++ + WN +IS +A++G +K+ + FHEM G PD VT V +LSAC++ G V EG
Sbjct: 773 INRSRLSWNILISAFARHGCFQKARETFHEMLKLGPKPDHVTFVSLLSACNHGGLVDEGL 832
Query: 349 EIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRT 408
++SM ++ V P EH C++DLLGR+G++ A I+ MP P+ + W SLL ACR
Sbjct: 833 AYYDSMTREFGVFPGIEHCVCIIDLLGRSGRLSHAEGFIKEMPVPPNDLAWRSLLAACRI 892
Query: 409 HMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCS 468
H L+LA A+ LL+L+P + Y+L SN+ A+ G++ DV LRK M N+ K P CS
Sbjct: 893 HGNLELARKTAEHLLELDPSDDSAYVLYSNVCATSGKWEDVENLRKEMGSNNIKKQPACS 952
Query: 469 WIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLL---REAGYCPDSSFVLHDVDEEEK 525
W++++ KVH F + HP R+ K+G L+ +EAGY PD+SF LHD+DEE+K
Sbjct: 953 WVKLKDKVHSFG----MGEKYHPQASRISAKLGELMKMTKEAGYVPDTSFALHDMDEEQK 1008
Query: 526 VHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANR 585
++L HSE+LA+A+GL+ PE +R+ KNLRVCGDCHS K +S ++GR+I+LRD R
Sbjct: 1009 EYNLWNHSERLALAFGLINTPESSTLRIFKNLRVCGDCHSVYKFVSGIVGRKIVLRDPYR 1068
Query: 586 FHHFKDGLCSCRDYW 600
FHHF G CSC DYW
Sbjct: 1069 FHHFSGGKCSCGDYW 1083
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 126/467 (26%), Positives = 204/467 (43%), Gaps = 60/467 (12%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MPER+VVSWTAMV GY + G +A LF M V + ++ + +++DA LF
Sbjct: 91 MPERSVVSWTAMVSGYSQNGRFEKAFVLFSDMRHCGVKANHALVDFHSKCGKMEDASYLF 150
Query: 61 DMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNV--------------------- 99
M E+DVV+ M+ GY G D+ +F M + +
Sbjct: 151 GTMMERDVVSWNAMIGGYAVQGFADDSFCMFRSMLRGGLVPDCYTLGSVLRASAEGGGLI 210
Query: 100 ------------------ISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMG-- 139
I +I+ Y N + A+ L + M +K+ S TA++ G
Sbjct: 211 IANQIHGIITQLGYGSYDIVTGLLINAYAKNGSLRSAKDLRKGMLKKDLFSSTALITGYA 270
Query: 140 --------------YTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQN--GEVQKARVV 183
Y + G I+DA F M K+V++ S+I G ++ G + AR V
Sbjct: 271 HEGIYTMGNALIDMYAKSGEIEDAKRAFDEMEEKNVISWTSLISGYAKHGYGHMAHARYV 330
Query: 184 FDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASL 243
FD+MR +++A+WS M+ Y R G E + LF M GV N + S+++ C+ +
Sbjct: 331 FDEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYM 390
Query: 244 -DHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISG 302
D G QVH +V+ DVYV + L+ Y G + + +F+ ++V W S++ G
Sbjct: 391 ADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVG 450
Query: 303 YAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEP 362
Y+ G + L V+ M GV + T V S+C G ++ + +Y E
Sbjct: 451 YSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHII-QYGFED 509
Query: 363 KTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTH 409
++ + VE+A + + M E D I W +++ A H
Sbjct: 510 SVSVANSLISMFSSFSSVEEACYVFDHMN-ECDIISWNAMISAYAHH 555
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 144/520 (27%), Positives = 229/520 (44%), Gaps = 106/520 (20%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDS--------- 51
M ER+VVSW AM+ GY +G ++ +F M +V LG +R S
Sbjct: 153 MMERDVVSWNAMIGGYAVQGFADDSFCMFRSMLRGGLVPDCYTLGSVLRASAEGGGLIIA 212
Query: 52 ------------------------------RIDDARRLFDMMPEKDVVAQTNMVLGYCQD 81
+ A+ L M +KD+ + T ++ GY +
Sbjct: 213 NQIHGIITQLGYGSYDIVTGLLINAYAKNGSLRSAKDLRKGMLKKDLFSSTALITGYAHE 272
Query: 82 G----------------RVDEGREIFDEMPKKNVISWTTMISGYVNNN--RIDVARKLFE 123
G +++ + FDEM +KNVISWT++ISGY + + AR +F+
Sbjct: 273 GIYTMGNALIDMYAKSGEIEDAKRAFDEMEEKNVISWTSLISGYAKHGYGHMAHARYVFD 332
Query: 124 VMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAM------PMKSVVAS------------- 164
M +NE SW+ ML GY + G ++A LF M P +VAS
Sbjct: 333 EMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMAD 392
Query: 165 ----------NSMILG-----------LGQNGEVQKARVVFDQMREKDDATWSGMIKVYE 203
+ ILG G G V A+ +F++M + + +W+ ++ Y
Sbjct: 393 EGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYS 452
Query: 204 RKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVY 263
G EV++++ M++EGV N + +V S C L G QV +++ F+ V
Sbjct: 453 DSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVS 512
Query: 264 VASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSG 323
VA+ LI+M+ + + +FD+ DI+ WN++IS YA +GL +SL+ FH M
Sbjct: 513 VANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLH 572
Query: 324 VMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDA 383
+ TL +LS CS +K GR I + K ++ ++ L AG+ EDA
Sbjct: 573 NETNSTTLSSLLSVCSSVDNLKWGRGI-HGLVVKLGLDSNVCICNTLLTLYSEAGRSEDA 631
Query: 384 MKLIEAMPFEPDAIIWGSLL------GACRTHMKLDLAEV 417
+ +AM E D I W S++ G C +K+ LAE+
Sbjct: 632 ELVFQAMT-ERDLISWNSMMACYVQDGKCLDGLKI-LAEL 669
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 98/381 (25%), Positives = 164/381 (43%), Gaps = 81/381 (21%)
Query: 103 TTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVV 162
T +I YV + AR +F+ MPE++ VSWTAM+ GY+Q GR + A+ LF M V
Sbjct: 69 TKLIIFYVKVGDVIAARNVFDGMPERSVVSWTAMVSGYSQNGRFEKAFVLFSDMRHCGVK 128
Query: 163 ASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEG 222
A+++++ + G+++ A +F M E+D +W+ MI Y +G+ + +F M + G
Sbjct: 129 ANHALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGGYAVQGFADDSFCMFRSMLRGG 188
Query: 223 VRVNFPSLISVLSVCASLASLDHGRQVHA---QLVRCQFDV------------------- 260
+ + +L SVL A L Q+H QL +D+
Sbjct: 189 LVPDCYTLGSVLRASAEGGGLIIANQIHGIITQLGYGSYDIVTGLLINAYAKNGSLRSAK 248
Query: 261 ---------DVYVASVLIT----------------MYIKCGELVKGKLIFDNFASKDIVM 295
D++ ++ LIT MY K GE+ K FD K+++
Sbjct: 249 DLRKGMLKKDLFSSTALITGYAHEGIYTMGNALIDMYAKSGEIEDAKRAFDEMEEKNVIS 308
Query: 296 WNSIISGYAQYGLG---------------------------------EKSLKVFHEMFSS 322
W S+ISGYA++G G E+++ +F +M+
Sbjct: 309 WTSLISGYAKHGYGHMAHARYVFDEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWGL 368
Query: 323 GVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVED 382
GV P+ + +++ACS +G + + K + +V G G V +
Sbjct: 369 GVEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYN 428
Query: 383 AMKLIEAMPFEPDAIIWGSLL 403
A KL E MP + + + W SL+
Sbjct: 429 AQKLFEEMP-DHNVVSWTSLM 448
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 117/255 (45%), Gaps = 21/255 (8%)
Query: 217 LMQKEGVRVNFPSL-ISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKC 275
L+ R++ PSL + +L +C + G +H L+ F D+++ + LI Y+K
Sbjct: 20 LLSSNPTRLD-PSLYLKILQLCIDKKAKKQGHLIHTHLITNGFGSDLHLNTKLIIFYVKV 78
Query: 276 GELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVL 335
G+++ + +FD + +V W +++SGY+Q G EK+ +F +M GV + LV
Sbjct: 79 GDVIAARNVFDGMPERSVVSWTAMVSGYSQNGRFEKAFVLFSDMRHCGVKANH-ALVDFH 137
Query: 336 SACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAM---PF 392
S C GK+++ +F +M + +V + M+ G +D+ + +M
Sbjct: 138 SKC---GKMEDASYLFGTMMERDVVS-----WNAMIGGYAVQGFADDSFCMFRSMLRGGL 189
Query: 393 EPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYI----LLSNIYASQGRFHD 448
PD GS+L A L +A + QL G Y LL N YA G
Sbjct: 190 VPDCYTLGSVLRASAEGGGLIIANQIHGIITQL---GYGSYDIVTGLLINAYAKNGSLRS 246
Query: 449 VAELRKNMRKRNVIK 463
+LRK M K+++
Sbjct: 247 AKDLRKGMLKKDLFS 261
>gi|414867547|tpg|DAA46104.1| TPA: hypothetical protein ZEAMMB73_772392 [Zea mays]
Length = 677
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 218/607 (35%), Positives = 345/607 (56%), Gaps = 20/607 (3%)
Query: 9 WTAMVRGYVEEGMITEAGTLFWQMPEK---NVVSWTVMLGGFIRDSRIDDAR----RLFD 61
W ++ + G A +F +P N ++T+ L R +D A R F
Sbjct: 76 WNGLLSAHSRAGAPGAALRVFRALPSSARPNSTTFTLTLTACARLGDLDAAESVRVRAFA 135
Query: 62 MMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKL 121
DV + ++ Y + G ++E +FD MP+K+ ++W+TM++G+V R A +
Sbjct: 136 AGYGHDVFVCSALLHLYSRCGAMEEAIRVFDGMPRKDRVAWSTMVAGFVTAGRPVEALAM 195
Query: 122 FEVMPEKNEVSWTAMLMGYTQ-CGRIQDA-------WELFKAMPMKSVVASNSMILGLGQ 173
+ M E +++G Q C +A L + VV + S++ +
Sbjct: 196 YSRMREHGVSDDEVVMVGVIQACMSTGNARIGASVHGRLLRHCMRMDVVTTTSLVSMYAK 255
Query: 174 NGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISV 233
NG + A VF M ++D TWS +I + + G +E +DLF +Q +G++ +L+S
Sbjct: 256 NGHLDVACQVFRMMPYRNDVTWSALISGFAQNGRAVEALDLFRELQADGLQPCSWALVSA 315
Query: 234 LSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDI 293
L CAS+ L G+ +H ++R + + + + ++ MY KCG L + +F+ +S+D+
Sbjct: 316 LLACASVGFLKLGKSIHGFILR-RLEWQCILGTAVLDMYSKCGSLESARKLFNKLSSRDL 374
Query: 294 VMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFES 353
V+WN+II+ +G G +L +F E+ +G+ PD T +LSA S++G V+EG+ F+
Sbjct: 375 VLWNAIIACCGTHGCGHDALALFQELNETGIKPDHATFASLLSALSHSGLVEEGKFWFDR 434
Query: 354 MKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLD 413
M ++ +EP +HY C+VDLL R+G VE+A ++ +M EP IW LL C + KL+
Sbjct: 435 MIKEFGIEPAEKHYVCIVDLLARSGLVEEANDMLASMQTEPTIAIWVILLSGCLNNKKLE 494
Query: 414 LAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVE 473
L E AKK+L+L P++ G L+SN+YA+ ++ V E+RK M+ K PG S IEV+
Sbjct: 495 LGETIAKKILELRPEDIGVLALVSNLYAAAKKWDKVREIRKLMKDSGSKKVPGYSLIEVK 554
Query: 474 KKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHS 533
H F D SHP+H I++M+ K+ +R+ GY P + FV HD+DE++ L YHS
Sbjct: 555 GTRHAFVMED-QSHPQHREILKMVAKLNSEMRKLGYVPRTEFVYHDLDEDQL---LSYHS 610
Query: 534 EKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGL 593
E+LA+A+GL+ G + ++KNLRVCGDCH AIK ISK++ REI++RDA RFHHFKDG
Sbjct: 611 ERLAIAFGLLNTSPGTRLVIIKNLRVCGDCHDAIKYISKIVDREIVVRDAKRFHHFKDGA 670
Query: 594 CSCRDYW 600
CSC DYW
Sbjct: 671 CSCGDYW 677
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 93/407 (22%), Positives = 193/407 (47%), Gaps = 45/407 (11%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIR------DSRID 54
MP ++ V+W+ MV G+V G EA ++ +M E V V++ G I+ ++RI
Sbjct: 168 MPRKDRVAWSTMVAGFVTAGRPVEALAMYSRMREHGVSDDEVVMVGVIQACMSTGNARIG 227
Query: 55 DA--RRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+ RL DVV T++V Y ++G +D ++F MP +N ++W+ +ISG+ N
Sbjct: 228 ASVHGRLLRHCMRMDVVTTTSLVSMYAKNGHLDVACQVFRMMPYRNDVTWSALISGFAQN 287
Query: 113 NRIDVARKLFEVMPEK--NEVSW---TAML----MGYTQCGRIQDAWELFKAMPMKSVVA 163
R A LF + SW +A+L +G+ + G+ + + + + + ++
Sbjct: 288 GRAVEALDLFRELQADGLQPCSWALVSALLACASVGFLKLGKSIHGF-ILRRLEWQCILG 346
Query: 164 SNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGV 223
+ + + + G ++ AR +F+++ +D W+ +I G + + LF + + G+
Sbjct: 347 TAVLDM-YSKCGSLESARKLFNKLSSRDLVLWNAIIACCGTHGCGHDALALFQELNETGI 405
Query: 224 RVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDV----YVASVLITMYIKCGELV 279
+ + + S+LS + ++ G+ ++++ +F ++ YV ++ + + G +
Sbjct: 406 KPDHATFASLLSALSHSGLVEEGKFWFDRMIK-EFGIEPAEKHYVC--IVDLLARSGLVE 462
Query: 280 KGKLIFDNFASK-DIVMWNSIISG---YAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVL 335
+ + + ++ I +W ++SG + LGE K E+ P+D+ ++ ++
Sbjct: 463 EANDMLASMQTEPTIAIWVILLSGCLNNKKLELGETIAKKILEL-----RPEDIGVLALV 517
Query: 336 S----ACSYTGKVKEGREIFESMKSK-----YLVEPK-TEHYACMVD 372
S A KV+E R++ + SK L+E K T H M D
Sbjct: 518 SNLYAAAKKWDKVREIRKLMKDSGSKKVPGYSLIEVKGTRHAFVMED 564
>gi|357519003|ref|XP_003629790.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523812|gb|AET04266.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 908
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 226/616 (36%), Positives = 348/616 (56%), Gaps = 18/616 (2%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV-VSWTVMLGGFIRDSRIDD---A 56
+ E +VVSW +M+ G V G +F QM V V T ++ + + I +
Sbjct: 256 LSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVACANIGNLSLG 315
Query: 57 RRLFDM----MPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
R L ++VV ++ Y + G ++ E+F +M ++SWT++I+ YV
Sbjct: 316 RALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSIIAAYVRE 375
Query: 113 NRIDVARKLFEVMPEKN---EVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASN---- 165
A LF+ M K ++ ++ C D + +K+ + SN
Sbjct: 376 GLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVT 435
Query: 166 -SMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVR 224
++I + G V++AR+VF ++ KD +W+ MI Y + E ++LF MQK+ +
Sbjct: 436 NALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNLLPNEALELFLDMQKQ-FK 494
Query: 225 VNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLI 284
+ ++ VL CA LA+LD GR++H ++R + D++VA L+ MY KCG LV +L+
Sbjct: 495 PDDITMACVLPACAGLAALDKGREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLL 554
Query: 285 FDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKV 344
FD KD++ W +I+GY +G G +++ F+EM +G+ PD+ + +L+ACS++G +
Sbjct: 555 FDMIPKKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSAILNACSHSGLL 614
Query: 345 KEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLG 404
EG + F SM+++ VEPK EHYAC+VDLL R G + A K IE+MP +PD IWG LL
Sbjct: 615 NEGWKFFNSMRNECGVEPKLEHYACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLS 674
Query: 405 ACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKP 464
CR H + LAE A+ + +LEP N Y++L+N+YA ++ +V +LRK M+KR +
Sbjct: 675 GCRIHHDVKLAEKVAEHIFELEPDNTRYYVVLANVYAEAEKWEEVKKLRKRMQKRGFKQN 734
Query: 465 PGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEE 524
PGCSWIEV K ++F + HP+ I +L K+ ++ Y +VL + D+ E
Sbjct: 735 PGCSWIEVGGKFNIFVAGN-SKHPQAKKIDVLLSKLTMQMQNEDYSSMFRYVLINEDDME 793
Query: 525 KVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDAN 584
K HSEK A+A+G++ LP G +RV KN RVCGDCH K +SK EI+LRD+N
Sbjct: 794 KEMIQCGHSEKSAMAFGILNLPPGRTVRVSKNRRVCGDCHEMGKFMSKTTKMEIVLRDSN 853
Query: 585 RFHHFKDGLCSCRDYW 600
RFHHFKDGLCSCRD +
Sbjct: 854 RFHHFKDGLCSCRDAF 869
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 115/447 (25%), Positives = 209/447 (46%), Gaps = 54/447 (12%)
Query: 12 MVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQ 71
+V YV G + + +F ++ V W +++ + + ++ LF M + VV
Sbjct: 135 LVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGN 194
Query: 72 ---------------------------------------TNMVLGYCQDGRVDEGREIFD 92
+++ Y + G V+ +FD
Sbjct: 195 CYTFTCVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFD 254
Query: 93 EMPKKNVISWTTMISGYVNN----NRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQD 148
E+ + +V+SW +MI+G V N N +++ ++ + E + + ++L+ G +
Sbjct: 255 ELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVACANIGNLSL 314
Query: 149 AWEL----FKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYER 204
L KA + VV SN+++ + G + A VF +M + +W+ +I Y R
Sbjct: 315 GRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSIIAAYVR 374
Query: 205 KGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYV 264
+G + I LF MQ +GVR + ++ S++ CA +SLD GR VH+ +++ ++ V
Sbjct: 375 EGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPV 434
Query: 265 ASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGV 324
+ LI MY KCG + + +L+F KDIV WN++I GY+Q L ++L++F +M
Sbjct: 435 TNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNLLPNEALELFLDM-QKQF 493
Query: 325 MPDDVTLVGVLSACSYTGKVKEGREIF-ESMKSKYLVEPKTEHYAC-MVDLLGRAGQVED 382
PDD+T+ VL AC+ + +GREI ++ Y + H AC +VD+ + G +
Sbjct: 494 KPDDITMACVLPACAGLAALDKGREIHGHILRRGYFSDL---HVACALVDMYAKCGLLVL 550
Query: 383 AMKLIEAMPFEPDAIIWGSLLGACRTH 409
A L + +P + D I W ++ H
Sbjct: 551 AQLLFDMIP-KKDLISWTVMIAGYGMH 576
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 95/365 (26%), Positives = 175/365 (47%), Gaps = 14/365 (3%)
Query: 53 IDDARRLFDMMPEK----DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISG 108
++D +R+ ++ D +V Y G + +GR+IFD++ V W ++S
Sbjct: 110 LEDGKRVHSVIISNGISVDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSE 169
Query: 109 YVNNNRIDVARKLFEVMPE----KNEVSWTAMLMGYTQCGRIQDAWEL----FKAMPMKS 160
Y + LF+ M + N ++T +L + G++++ + K +
Sbjct: 170 YAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVLKLGFGSN 229
Query: 161 VVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQK 220
NS+I + G V+ A +FD++ E D +W+ MI G+ +++F M
Sbjct: 230 TAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLI 289
Query: 221 EGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVK 280
GV V+ +L+SVL CA++ +L GR +H V+ F +V ++ L+ MY KCG L
Sbjct: 290 LGVEVDLTTLVSVLVACANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNG 349
Query: 281 GKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSY 340
+F IV W SII+ Y + GL ++ +F EM S GV PD T+ ++ AC+
Sbjct: 350 ATEVFVKMGDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACAC 409
Query: 341 TGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWG 400
+ + +GR++ S K + ++++ + G VE+A + +P + D + W
Sbjct: 410 SSSLDKGRDV-HSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVK-DIVSWN 467
Query: 401 SLLGA 405
+++G
Sbjct: 468 TMIGG 472
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 97/190 (51%), Gaps = 2/190 (1%)
Query: 217 LMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCG 276
L + + + S SVL +CA SL+ G++VH+ ++ VD + + L+ MY+ CG
Sbjct: 84 LTKSKSYELGLNSYCSVLQLCAEKKSLEDGKRVHSVIISNGISVDEALGAKLVFMYVNCG 143
Query: 277 ELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLS 336
+LV+G+ IFD + + +WN ++S YA+ G +S+ +F +M GV+ + T VL
Sbjct: 144 DLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLK 203
Query: 337 ACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDA 396
+ GKVKE + + K T ++ + G VE A L + + EPD
Sbjct: 204 CFAALGKVKECKRV-HGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELS-EPDV 261
Query: 397 IIWGSLLGAC 406
+ W S++ C
Sbjct: 262 VSWNSMINGC 271
>gi|297849508|ref|XP_002892635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338477|gb|EFH68894.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 809
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 217/616 (35%), Positives = 350/616 (56%), Gaps = 18/616 (2%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFI------RDSRID 54
MPER++VSW +V GY + GM A + M E+N+ + + + R RI
Sbjct: 196 MPERDLVSWNTIVAGYSQNGMARMALEMVNLMCEENLKPSFITIVSVLPAVSALRLIRIG 255
Query: 55 DARRLFDMMPEKDVVAQ--TNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+ M D + T +V Y + G + R +FD M ++NV+SW +MI YV N
Sbjct: 256 KEIHGYAMRAGFDSLVNIATALVDMYAKCGSLKTARLLFDGMLERNVVSWNSMIDAYVQN 315
Query: 113 NRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAMPM----KSVVAS 164
A +F+ M ++ +VS L G ++ + K ++V
Sbjct: 316 ENPKEAMVIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELELDRNVSVV 375
Query: 165 NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVR 224
NS+I + EV A +F +++ + +W+ MI + + G +E ++ F+ MQ V+
Sbjct: 376 NSLISMYCKCKEVDTAASMFGKLQSRTIVSWNAMILGFAQNGRPIEALNYFSQMQARTVK 435
Query: 225 VNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLI 284
+ + +SV++ A L+ H + +H ++R D +V+V + L+ MY KCG ++ +LI
Sbjct: 436 PDTFTYVSVITAIAELSITHHAKWIHGVVMRNCLDKNVFVTTALVDMYAKCGAIMIARLI 495
Query: 285 FDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKV 344
FD + + + WN++I GY +G+G+ +L++F EM + P+ VT + V+SACS++G V
Sbjct: 496 FDMMSERHVTTWNAMIDGYGTHGIGKAALELFEEMQKGTIRPNGVTFLSVISACSHSGLV 555
Query: 345 KEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLG 404
+ G + F MK Y +EP +HY MVDLLGRAG++ +A I MP +P ++G++LG
Sbjct: 556 EAGLKCFHMMKENYSIEPSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLG 615
Query: 405 ACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKP 464
AC+ H ++ AE A++L +L P++ G ++LL+NIY + + V ++R +M ++ + K
Sbjct: 616 ACQIHKNVNFAEKVAERLFELNPEDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKT 675
Query: 465 PGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEE 524
PGCS +E++ +VH F +HP I LEK+ ++EAGY PD++ +L ++++
Sbjct: 676 PGCSMVEIKNEVHSFFS-GSTAHPSSKKIYAFLEKLICQIKEAGYVPDTNLIL-GLEDDV 733
Query: 525 KVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDAN 584
K L HSEKLA+++GL+ G I V KNLRVC DCH+A K IS V GREII+RD
Sbjct: 734 KEQLLSSHSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHNATKYISLVTGREIIVRDMQ 793
Query: 585 RFHHFKDGLCSCRDYW 600
RFHHFK+G CSC DYW
Sbjct: 794 RFHHFKNGACSCGDYW 809
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 113/448 (25%), Positives = 203/448 (45%), Gaps = 51/448 (11%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEK--- 66
T +V + G + EA +F + +K V + ML GF + S +D A + F M +
Sbjct: 73 TKLVSLFCRYGSVDEAARVFEPIDKKLNVLYYTMLKGFAKVSDLDKALKFFVRMRDDEVE 132
Query: 67 ------------------------------------DVVAQTNMVLGYCQDGRVDEGREI 90
D+ A T + Y + +V E R++
Sbjct: 133 PVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVHEARKV 192
Query: 91 FDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNE----VSWTAMLMGYTQCGRI 146
FD MP+++++SW T+++GY N +A ++ +M E+N ++ ++L + I
Sbjct: 193 FDRMPERDLVSWNTIVAGYSQNGMARMALEMVNLMCEENLKPSFITIVSVLPAVSALRLI 252
Query: 147 QDAWELFKAMPMKS-----VVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKV 201
+ E+ M++ V + +++ + G ++ AR++FD M E++ +W+ MI
Sbjct: 253 RIGKEI-HGYAMRAGFDSLVNIATALVDMYAKCGSLKTARLLFDGMLERNVVSWNSMIDA 311
Query: 202 YERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVD 261
Y + E + +F M EGV+ S++ L CA L L+ GR +H V + D +
Sbjct: 312 YVQNENPKEAMVIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELELDRN 371
Query: 262 VYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFS 321
V V + LI+MY KC E+ +F S+ IV WN++I G+AQ G ++L F +M +
Sbjct: 372 VSVVNSLISMYCKCKEVDTAASMFGKLQSRTIVSWNAMILGFAQNGRPIEALNYFSQMQA 431
Query: 322 SGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVE 381
V PD T V V++A + + I + + ++ +VD+ + G +
Sbjct: 432 RTVKPDTFTYVSVITAIAELSITHHAKWI-HGVVMRNCLDKNVFVTTALVDMYAKCGAIM 490
Query: 382 DAMKLIEAMPFEPDAIIWGSLLGACRTH 409
A +LI M E W +++ TH
Sbjct: 491 IA-RLIFDMMSERHVTTWNAMIDGYGTH 517
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 88/292 (30%), Positives = 154/292 (52%), Gaps = 16/292 (5%)
Query: 71 QTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNE 130
QT +V +C+ G VDE +F+ + KK + + TM+ G+ + +D A K F M + +E
Sbjct: 72 QTKLVSLFCRYGSVDEAARVFEPIDKKLNVLYYTMLKGFAKVSDLDKALKFFVRMRD-DE 130
Query: 131 VSWTAMLMGYTQ--CGRIQDAWELFKAMPMKSVVASNSMILGL----------GQNGEVQ 178
V Y CG D EL + ++ + L L + +V
Sbjct: 131 VEPVVYNFTYLLKVCG---DEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVH 187
Query: 179 KARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCA 238
+AR VFD+M E+D +W+ ++ Y + G +++ LM +E ++ +F +++SVL +
Sbjct: 188 EARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVNLMCEENLKPSFITIVSVLPAVS 247
Query: 239 SLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNS 298
+L + G+++H +R FD V +A+ L+ MY KCG L +L+FD +++V WNS
Sbjct: 248 ALRLIRIGKEIHGYAMRAGFDSLVNIATALVDMYAKCGSLKTARLLFDGMLERNVVSWNS 307
Query: 299 IISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREI 350
+I Y Q ++++ +F +M GV P DV+++G L AC+ G ++ GR I
Sbjct: 308 MIDAYVQNENPKEAMVIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFI 359
>gi|147865382|emb|CAN79811.1| hypothetical protein VITISV_018821 [Vitis vinifera]
Length = 871
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 244/667 (36%), Positives = 366/667 (54%), Gaps = 68/667 (10%)
Query: 1 MPERNV---VSWTAMVRGYVEEGMITEAGTLFWQMPEK-----------NVVSWTVMLGG 46
M ER V VSW ++V Y++ G A +F +M E NV+ +G
Sbjct: 206 MRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGA 265
Query: 47 FIRDSRI-----------------------------DDARRLFDMMPEKDVVAQTNMVLG 77
+ R ++ ++A ++F+ M KDVV+ MV G
Sbjct: 266 WSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTG 325
Query: 78 YCQDGRVDEGREIFDEMPKK----NVISWTTMISGYVNNN----RIDVARKLFEVMPEKN 129
Y Q GR D+ +F+++ ++ NV++W+ +I+GY +DV R++ E N
Sbjct: 326 YSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMLLCGSEPN 385
Query: 130 EVSWTAMLMGY-----------TQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQ 178
V+ ++L G T C I+ L + P ++ N++I + +
Sbjct: 386 VVTLVSLLSGCASAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCKSPK 445
Query: 179 KARVVFDQMREKDDA--TWSGMIKVYERKGYELEVIDLFTLMQKEG--VRVNFPSLISVL 234
AR +FD + KD + TW+ +I + G E ++LF+ M + V N ++ L
Sbjct: 446 AARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTISCAL 505
Query: 235 SVCASLASLDHGRQVHAQLVRCQFDVD-VYVASVLITMYIKCGELVKGKLIFDNFASKDI 293
CA L +L GRQ+HA ++R +F+ ++VA+ LI MY K G++ +++FDN ++
Sbjct: 506 MACARLGALRFGRQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQRNG 565
Query: 294 VMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFES 353
V W S+++GY +G GE++L++F+EM ++PD VT V VL ACS++G V +G F
Sbjct: 566 VSWTSLMTGYGMHGRGEEALQIFYEMQKVXLVPDGVTFVVVLYACSHSGMVDQGINYFNG 625
Query: 354 MKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLD 413
M + V P EHYACMVDLL RAG++++AM+LI MP +P +W +LL ACR + ++
Sbjct: 626 MNKDFGVVPGAEHYACMVDLLSRAGRLDEAMELIRGMPMKPTPAVWVALLSACRVYANVE 685
Query: 414 LAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVE 473
L E AA +LL+LE N G Y LLSNIYA+ + DVA +R M+ + K PGCSW++
Sbjct: 686 LGEYAANQLLELESGNDGSYTLLSNIYANARCWKDVARIRYLMKNTGIKKRPGCSWVQGR 745
Query: 474 KKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHS 533
K F D SHP I +L + ++ GY PD+ F LHDVD+EEK L HS
Sbjct: 746 KGTATFFAGDW-SHPMSQQIYDLLRDLMQRIKALGYVPDNRFALHDVDDEEKGDLLSEHS 804
Query: 534 EKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGL 593
EKLA+AYG++ G PIR+ KNLR CGDCHSA IS ++ EII+RD++RFHHFK+G
Sbjct: 805 EKLALAYGILTTAPGAPIRITKNLRACGDCHSAFTYISIIIEHEIIVRDSSRFHHFKNGS 864
Query: 594 CSCRDYW 600
CSCR YW
Sbjct: 865 CSCRGYW 871
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 115/477 (24%), Positives = 203/477 (42%), Gaps = 75/477 (15%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQM------PEKNVVSWTVMLGGFIRDSRIDDA 56
V W ++R V G + + L+ +M P+ + + G I R +
Sbjct: 107 SHTVFWWNQLIRRSVHLGFLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGEIPSFRCGAS 166
Query: 57 RR--LFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNV---ISWTTMISGYVN 111
+F E +V +V Y + G + R++FDEM ++ V +SW ++++ Y+
Sbjct: 167 VHAVVFASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQ 226
Query: 112 NNRIDVARKLFEVMPEK-----NEVSWTAMLMGYTQCGRIQDAWE--------LFKAMPM 158
A K+FE M E + VS +L G AW ++
Sbjct: 227 GGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVG----AWSRGKQVHGYALRSGLF 282
Query: 159 KSVVASNSMILGLGQNGEVQKARVVFDQMREK------------------DDA------- 193
+ V N+++ + G +++A VF++M+ K DDA
Sbjct: 283 EDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKI 342
Query: 194 ----------TWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASL 243
TWS +I Y ++G E +D+F M G N +L+S+LS CAS +L
Sbjct: 343 REEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMLLCGSEPNVVTLVSLLSGCASAGTL 402
Query: 244 DHGRQVHAQLVRCQFDV-------DVYVASVLITMYIKCGELVKGKLIFDNFASKD--IV 294
HG++ H ++ ++ D+ V + LI MY KC + +FD KD +V
Sbjct: 403 LHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVV 462
Query: 295 MWNSIISGYAQYGLGEKSLKVFHEMFS--SGVMPDDVTLVGVLSACSYTGKVKEGREIFE 352
W +I G AQ+G ++L++F +M + VMP+ T+ L AC+ G ++ GR+I
Sbjct: 463 TWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHA 522
Query: 353 SMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTH 409
+ C++D+ ++G V+ A + + M + + + W SL+ H
Sbjct: 523 YVLRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDNM-HQRNGVSWTSLMTGYGMH 578
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 151/317 (47%), Gaps = 50/317 (15%)
Query: 160 SVVASNSMILGLGQNGEVQKARVVFDQMREK---DDATWSGMIKVYERKGYELEVIDLFT 216
+V N ++ G+ G + AR VFD+MRE+ D +W+ ++ Y + G + + +F
Sbjct: 179 NVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFE 238
Query: 217 LMQKE-GVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKC 275
M ++ G+R + SL++VL CAS+ + G+QVH +R DV+V + ++ MY KC
Sbjct: 239 RMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKC 298
Query: 276 GELVKGKLIFDNFASKDIVMWNS-----------------------------------II 300
G + + +F+ KD+V WN+ +I
Sbjct: 299 GMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVI 358
Query: 301 SGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLV 360
+GYAQ GLG ++L VF +M G P+ VTLV +LS C+ G + G+E K+++
Sbjct: 359 AGYAQRGLGFEALDVFRQMLLCGSEPNVVTLVSLLSGCASAGTLLHGKET-HCHAIKWIL 417
Query: 361 -----EPKTEHYA--CMVDLLGRAGQVEDAMKLIEAMPFEPDAII-WGSLLGACRTHMKL 412
+P + ++D+ + + A + + +P + +++ W L+G H +
Sbjct: 418 NLDENDPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEA 477
Query: 413 DLAEVAAKKLLQLEPKN 429
+ A ++LQ P N
Sbjct: 478 NEALELFSQMLQ--PDN 492
>gi|357132372|ref|XP_003567804.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
mitochondrial-like [Brachypodium distachyon]
Length = 851
Score = 407 bits (1046), Expect = e-110, Method: Compositional matrix adjust.
Identities = 217/623 (34%), Positives = 349/623 (56%), Gaps = 28/623 (4%)
Query: 2 PERNVVSWTAMVRGYVEEGMITEAGTLFWQM----PEKNVVSWTVMLGGFIRDSRIDDA- 56
P V+W A+V V G++ +A L +M PE + +W +L G R R +A
Sbjct: 233 PPPRSVAWDAVVACCVRLGLVDDAMELAGRMARDGPEPTLATWNAVLSGCARHGRDREAL 292
Query: 57 ---RRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVI----SWTTMISGY 109
RR+ + D ++++ G V G E+ + ++ + T ++ Y
Sbjct: 293 AVLRRMLEQGLWPDATTVSSLLKSVANAGMVRHGMEVHCFFLRHGLVPDAYTGTALVDMY 352
Query: 110 VNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMK----SVVASN 165
R+D AR++F+ + +N +W +++ G+ G+ + A EL + M +V N
Sbjct: 353 AKCGRLDCARRVFDTLEHRNLATWNSLVAGHAYAGQFEAALELVERMKRNRLDPNVTTWN 412
Query: 166 SMILGLGQNGEVQKARVVFDQMREK----DDATWSGMIKVYERKGYELEVIDLFTLMQKE 221
+I G NG +A ++ Q++ + +W+ +I G + + F MQK+
Sbjct: 413 GLITGYSLNGLSSQAMLLLRQIKAAGLTPNVVSWTSLISGSCHNGEYEDSFNFFKEMQKD 472
Query: 222 GVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKG 281
GV+ + +++ +L CA LA L G+++H +R +D D+ V + LI MY K G L
Sbjct: 473 GVQPSLVTMLVLLRACAGLALLKKGKELHCFALRRAYDCDMVVGTALIDMYSKAGSLTSA 532
Query: 282 KLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYT 341
K IF +K++V N++++G A +G +++ +FH+++ SG+ PD +T +L+AC
Sbjct: 533 KRIFGRIQNKNLVCCNAMLTGLAVHGQSHEAITLFHDLWRSGLKPDSITFTALLTACRSM 592
Query: 342 GKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGS 401
G + EG E F++M++KY V P E+YACMVDLL R+G +++AM LIE P +P A +WG+
Sbjct: 593 GLITEGWEYFDNMETKYGVVPTAENYACMVDLLARSGYLDEAMALIERSPVDPGASLWGA 652
Query: 402 LLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNV 461
LL C H LDLAEVAA+ L +LEP N+ Y+++ ++Y + + + L+ M+ R V
Sbjct: 653 LLTGCSIHGNLDLAEVAARNLFRLEPYNSANYLMIMSLYEHEQMYDEADSLKYAMKARGV 712
Query: 462 IKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLRE---AGYCPDSSFVLH 518
PG SWI++E+ +H+F V HP + E++ L+R+ GY PD+S V++
Sbjct: 713 NTRPGWSWIQIEQGIHVFE----VDGSPHPETAEICEELMSLVRQIKMTGYVPDTSCVVY 768
Query: 519 DVDEEEKVHSLRYHSEKLAVAYGLVKLPEG-VPIRVMKNLRVCGDCHSAIKLISKVMGRE 577
+V EEEK L H+EKLA+ YGL+ +P+RV+KN R+C DCH K IS + GR+
Sbjct: 769 NVPEEEKEKLLLCHTEKLAITYGLIHSDASRMPVRVIKNTRMCSDCHEVAKHISALCGRQ 828
Query: 578 IILRDANRFHHFKDGLCSCRDYW 600
IILRDA RFHHF DG CSC DYW
Sbjct: 829 IILRDAVRFHHFVDGNCSCNDYW 851
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 68/314 (21%), Positives = 133/314 (42%), Gaps = 29/314 (9%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMP----EKNVVSWTVMLGGFIRDSRIDDA 56
+ RN+ +W ++V G+ G A L +M + NV +W ++ G+ + A
Sbjct: 368 LEHRNLATWNSLVAGHAYAGQFEAALELVERMKRNRLDPNVTTWNGLITGYSLNGLSSQA 427
Query: 57 RRLFDMMPEK----DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNV-ISWTTMISGYVN 111
L + +VV+ T+++ G C +G ++ F EM K V S TM+
Sbjct: 428 MLLLRQIKAAGLTPNVVSWTSLISGSCHNGEYEDSFNFFKEMQKDGVQPSLVTMLVLLRA 487
Query: 112 NNRIDVARKLFEV-------MPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVAS 164
+ + +K E+ + + V TA++ Y++ G + A +F + K++V
Sbjct: 488 CAGLALLKKGKELHCFALRRAYDCDMVVGTALIDMYSKAGSLTSAKRIFGRIQNKNLVCC 547
Query: 165 NSMILGLGQNGEVQKARVVFDQM----REKDDATWSGMIKVYERKGYELEVIDLFTLMQ- 219
N+M+ GL +G+ +A +F + + D T++ ++ G E + F M+
Sbjct: 548 NAMLTGLAVHGQSHEAITLFHDLWRSGLKPDSITFTALLTACRSMGLITEGWEYFDNMET 607
Query: 220 KEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELV 279
K GV + ++ + A LD + A + R D + L+T G +
Sbjct: 608 KYGVVPTAENYACMVDLLARSGYLD---EAMALIERSPVDPGASLWGALLT-----GCSI 659
Query: 280 KGKLIFDNFASKDI 293
G L A++++
Sbjct: 660 HGNLDLAEVAARNL 673
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 91/248 (36%), Gaps = 53/248 (21%)
Query: 230 LISVLSVCASLASLDH-------------GRQVHAQLVRCQFDV-DVYVASVLITMYIKC 275
L+S+L C + LD Q+H+ VR + VA L + +
Sbjct: 53 LLSLLRQCGDMICLDEEDTGSSLRAARRLAPQLHSLAVRAGHATREPRVACALSDLLARL 112
Query: 276 GELVKGKLIFDNF----ASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTL 331
G + + + KD V+WN ++ A+ G ++++ F EM + GV D L
Sbjct: 113 GRGPSSRRLLEEADESEGGKDAVLWNKQVAMLAEAGEWDEAIGAFREMQARGVAADGYAL 172
Query: 332 VGVLSACSYTGKVKEGREIFESMKSKYLVE------------------------------ 361
VL AC +EG+ + LV+
Sbjct: 173 ARVLHACGRAAARREGKAVHAHALKAGLVDAHPLVPGFLAGMYAEGADVAAATAVLLRAT 232
Query: 362 --PKTEHYACMVDLLGRAGQVEDAMKLIEAMPF---EPDAIIWGSLLGACRTHMKLDLAE 416
P++ + +V R G V+DAM+L M EP W ++L C H + A
Sbjct: 233 PPPRSVAWDAVVACCVRLGLVDDAMELAGRMARDGPEPTLATWNAVLSGCARHGRDREAL 292
Query: 417 VAAKKLLQ 424
+++L+
Sbjct: 293 AVLRRMLE 300
>gi|296089821|emb|CBI39640.3| unnamed protein product [Vitis vinifera]
Length = 346
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 190/243 (78%), Positives = 219/243 (90%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MPERNVVSWTAMVRGYV+EG+++EA TLFWQMPEKNVVSWTVMLGG I+ RID+AR LF
Sbjct: 104 MPERNVVSWTAMVRGYVQEGLVSEAETLFWQMPEKNVVSWTVMLGGLIQVRRIDEARGLF 163
Query: 61 DMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARK 120
D+MP KDVVA+TNM+ GYCQ+GR+ E RE+FDEMP++NVISWTTMISGYV N ++DVARK
Sbjct: 164 DIMPVKDVVARTNMISGYCQEGRLAEARELFDEMPRRNVISWTTMISGYVQNGQVDVARK 223
Query: 121 LFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKA 180
LFEVMPEKNEVSWTAMLMGYTQ GRI++A ELF AMP+K+VVA N+MILG GQNGEV KA
Sbjct: 224 LFEVMPEKNEVSWTAMLMGYTQGGRIEEASELFDAMPVKAVVACNAMILGFGQNGEVAKA 283
Query: 181 RVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASL 240
R VFDQ+REKDD TWS MIKVYERKG+E+E ++LF LMQ+EGV+ NFPSLISVLSVCASL
Sbjct: 284 RQVFDQIREKDDGTWSAMIKVYERKGFEVEALNLFALMQREGVQSNFPSLISVLSVCASL 343
Query: 241 ASL 243
A+
Sbjct: 344 ANF 346
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 115/334 (34%), Positives = 183/334 (54%), Gaps = 10/334 (2%)
Query: 7 VSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEK 66
+++ + + Y G I A +F +MP+K +VSW M+ G+ +++R +AR LFD MPE+
Sbjct: 17 IAYNSQIARYARIGQIESARRVFDEMPDKGIVSWNSMVAGYFQNNRPREARYLFDKMPER 76
Query: 67 DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMP 126
+ V+ ++ GY ++ V E R+ FD MP++NV+SWT M+ GYV + A LF MP
Sbjct: 77 NTVSWNGLISGYVKNRMVSEARKAFDTMPERNVVSWTAMVRGYVQEGLVSEAETLFWQMP 136
Query: 127 EKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQ 186
EKN VSWT ML G Q RI +A LF MP+K VVA +MI G Q G + +AR +FD+
Sbjct: 137 EKNVVSWTVMLGGLIQVRRIDEARGLFDIMPVKDVVARTNMISGYCQEGRLAEARELFDE 196
Query: 187 MREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHG 246
M ++ +W+ MI Y + G LF +M ++ V++ +++ + G
Sbjct: 197 MPRRNVISWTTMISGYVQNGQVDVARKLFEVMPEKN-EVSWTAML--------MGYTQGG 247
Query: 247 RQVHAQLVRCQFDVDVYVA-SVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQ 305
R A + V VA + +I + + GE+ K + +FD KD W+++I Y +
Sbjct: 248 RIEEASELFDAMPVKAVVACNAMILGFGQNGEVAKARQVFDQIREKDDGTWSAMIKVYER 307
Query: 306 YGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACS 339
G ++L +F M GV + +L+ VLS C+
Sbjct: 308 KGFEVEALNLFALMQREGVQSNFPSLISVLSVCA 341
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 90/312 (28%), Positives = 163/312 (52%), Gaps = 34/312 (10%)
Query: 100 ISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMK 159
I++ + I+ Y +I+ AR++F+ MP+K VSW +M+ GY Q R ++A LF MP +
Sbjct: 17 IAYNSQIARYARIGQIESARRVFDEMPDKGIVSWNSMVAGYFQNNRPREARYLFDKMPER 76
Query: 160 SVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQ 219
+ V+ N +I G +N V +AR FD M E++ +W+ M++ Y ++G E LF M
Sbjct: 77 NTVSWNGLISGYVKNRMVSEARKAFDTMPERNVVSWTAMVRGYVQEGLVSEAETLFWQMP 136
Query: 220 KEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDV----DVYVASVLITMYIKC 275
++ +V+S L L R++ R FD+ DV + +I+ Y +
Sbjct: 137 EK----------NVVSWTVMLGGLIQVRRIDE--ARGLFDIMPVKDVVARTNMISGYCQE 184
Query: 276 GELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMP--DDVTLVG 333
G L + + +FD ++++ W ++ISGY Q G + + K+F VMP ++V+
Sbjct: 185 GRLAEARELFDEMPRRNVISWTTMISGYVQNGQVDVARKLFE------VMPEKNEVSWTA 238
Query: 334 VLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYAC--MVDLLGRAGQVEDAMKLIEAMP 391
+L + G+++E E+F++M K +V AC M+ G+ G+V A ++ + +
Sbjct: 239 MLMGYTQGGRIEEASELFDAMPVKAVV-------ACNAMILGFGQNGEVAKARQVFDQIR 291
Query: 392 FEPDAIIWGSLL 403
E D W +++
Sbjct: 292 -EKDDGTWSAMI 302
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 89/195 (45%), Gaps = 15/195 (7%)
Query: 269 ITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDD 328
I Y + G++ + +FD K IV WNS+++GY Q ++ +F +M +
Sbjct: 23 IARYARIGQIESARRVFDEMPDKGIVSWNSMVAGYFQNNRPREARYLFDKMPER----NT 78
Query: 329 VTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIE 388
V+ G++S V E R+ F++M + +V + MV + G V +A L
Sbjct: 79 VSWNGLISGYVKNRMVSEARKAFDTMPERNVV-----SWTAMVRGYVQEGLVSEAETLFW 133
Query: 389 AMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEP-KNAGPYILLSNIYASQGRFH 447
MP E + + W +LG ++D A+ L + P K+ + + Y +GR
Sbjct: 134 QMP-EKNVVSWTVMLGGLIQVRRID----EARGLFDIMPVKDVVARTNMISGYCQEGRLA 188
Query: 448 DVAELRKNMRKRNVI 462
+ EL M +RNVI
Sbjct: 189 EARELFDEMPRRNVI 203
>gi|357141866|ref|XP_003572374.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Brachypodium distachyon]
Length = 642
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 213/536 (39%), Positives = 328/536 (61%), Gaps = 9/536 (1%)
Query: 71 QTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVN--NNRIDVARKLFEVMPE- 127
++V Y + G +D+ E+F MP++NV+SWTT+++ N + + R L E+ +
Sbjct: 110 SNSLVSMYAKFGMLDDALELFGGMPQRNVVSWTTVVAALANAPGRKKEALRFLVEMRRDG 169
Query: 128 --KNEVSWTAMLMGYTQCGRIQDAW-ELFKAMPMKSVVASNSMILGLGQNGEVQKARVVF 184
N +++++L G + ++ K V +S+I + G++ R VF
Sbjct: 170 VAANSYTFSSVLGACGTPGVLAAMHADIIKVGLDSDVFVRSSLIDAYMKLGDLDSGRGVF 229
Query: 185 DQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLD 244
D+M D W+ +I + + G + ++LF M++ G N +L SVL C + L+
Sbjct: 230 DEMVTCDLVVWNSIIAGFAQSGDGVGAMELFMRMKESGFLANQGTLTSVLRACTGMVMLE 289
Query: 245 HGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYA 304
GRQVHA +++ +D D+ + + L+ MY KCG L+ +F +D++ W+++ISG A
Sbjct: 290 VGRQVHAHVLK--YDRDLILHNALLDMYCKCGCLLDADALFSRMHDRDVISWSTMISGLA 347
Query: 305 QYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKT 364
Q G ++LKVF M + G P+++T+VGVL ACS+ G V++G F SM + ++P+
Sbjct: 348 QNGRSVEALKVFDLMKAEGPTPNNITMVGVLFACSHAGLVEDGWHYFRSMDKLFGIQPER 407
Query: 365 EHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQ 424
EH CMVDLLGRAG++++AMK I M FEPD++IW +LLGACR H LA AA ++L+
Sbjct: 408 EHCNCMVDLLGRAGKLDEAMKFIGEMKFEPDSVIWRTLLGACRMHKNATLASYAATEILK 467
Query: 425 LEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDC 484
LEP++ G ILLSNIYA ++ + + K MR + V K PG SWIE+ K VH+F +
Sbjct: 468 LEPEDQGARILLSNIYADLRQWSNAEKSWKTMRDQGVKKEPGRSWIELGKLVHVFIAGE- 526
Query: 485 VSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVK 544
+SHP I++ L ++ ++ GY P + FVL D+ E+K L+YHSEKLA+A+G +
Sbjct: 527 LSHPCSDRIVQELNRLIRRAKDLGYVPQTEFVLQDLGTEQKEDLLKYHSEKLAIAFGTMN 586
Query: 545 LPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
EG P+R+MKNLR+CGDCH+ KL+SK G+ II+RD RFHHF+ G+CSC DYW
Sbjct: 587 SMEGKPVRIMKNLRICGDCHAFAKLVSKTEGKAIIIRDPVRFHHFQHGVCSCGDYW 642
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 128/245 (52%), Gaps = 8/245 (3%)
Query: 160 SVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERK-GYELEVIDLFTLM 218
S+ SNS++ + G + A +F M +++ +W+ ++ G + E + M
Sbjct: 106 SLFVSNSLVSMYAKFGMLDDALELFGGMPQRNVVSWTTVVAALANAPGRKKEALRFLVEM 165
Query: 219 QKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGEL 278
+++GV N + SVL C + L +HA +++ D DV+V S LI Y+K G+L
Sbjct: 166 RRDGVAANSYTFSSVLGACGTPGVL---AAMHADIIKVGLDSDVFVRSSLIDAYMKLGDL 222
Query: 279 VKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSAC 338
G+ +FD + D+V+WNSII+G+AQ G G ++++F M SG + + TL VL AC
Sbjct: 223 DSGRGVFDEMVTCDLVVWNSIIAGFAQSGDGVGAMELFMRMKESGFLANQGTLTSVLRAC 282
Query: 339 SYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAII 398
+ ++ GR++ + KY + + ++D+ + G + DA L M + D I
Sbjct: 283 TGMVMLEVGRQVHAHVL-KY--DRDLILHNALLDMYCKCGCLLDADALFSRM-HDRDVIS 338
Query: 399 WGSLL 403
W +++
Sbjct: 339 WSTMI 343
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 125/283 (44%), Gaps = 49/283 (17%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIR-DSRIDDARRLFDMMP---- 64
++V Y + GM+ +A LF MP++NVVSWT ++ R +A R M
Sbjct: 111 NSLVSMYAKFGMLDDALELFGGMPQRNVVSWTTVVAALANAPGRKKEALRFLVEMRRDGV 170
Query: 65 --------------------------------EKDVVAQTNMVLGYCQDGRVDEGREIFD 92
+ DV +++++ Y + G +D GR +FD
Sbjct: 171 AANSYTFSSVLGACGTPGVLAAMHADIIKVGLDSDVFVRSSLIDAYMKLGDLDSGRGVFD 230
Query: 93 EMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEK----NEVSWTAMLMGYT-----QC 143
EM +++ W ++I+G+ + A +LF M E N+ + T++L T +
Sbjct: 231 EMVTCDLVVWNSIIAGFAQSGDGVGAMELFMRMKESGFLANQGTLTSVLRACTGMVMLEV 290
Query: 144 GRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYE 203
GR A L + ++ N+++ + G + A +F +M ++D +WS MI
Sbjct: 291 GRQVHAHVLKYD---RDLILHNALLDMYCKCGCLLDADALFSRMHDRDVISWSTMISGLA 347
Query: 204 RKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHG 246
+ G +E + +F LM+ EG N +++ VL C+ ++ G
Sbjct: 348 QNGRSVEALKVFDLMKAEGPTPNNITMVGVLFACSHAGLVEDG 390
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 101/211 (47%), Gaps = 16/211 (7%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSR----IDDARRLF 60
++V W +++ G+ + G A LF +M E ++ L +R ++ R++
Sbjct: 236 DLVVWNSIIAGFAQSGDGVGAMELFMRMKESGFLANQGTLTSVLRACTGMVMLEVGRQVH 295
Query: 61 D--MMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVA 118
+ ++D++ ++ YC+ G + + +F M ++VISW+TMISG N R A
Sbjct: 296 AHVLKYDRDLILHNALLDMYCKCGCLLDADALFSRMHDRDVISWSTMISGLAQNGRSVEA 355
Query: 119 RKLFEVM----PEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVA-----SNSMIL 169
K+F++M P N ++ +L + G ++D W F++M + N M+
Sbjct: 356 LKVFDLMKAEGPTPNNITMVGVLFACSHAGLVEDGWHYFRSMDKLFGIQPEREHCNCMVD 415
Query: 170 GLGQNGEVQKARVVFDQMR-EKDDATWSGMI 199
LG+ G++ +A +M+ E D W ++
Sbjct: 416 LLGRAGKLDEAMKFIGEMKFEPDSVIWRTLL 446
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/221 (19%), Positives = 94/221 (42%), Gaps = 21/221 (9%)
Query: 198 MIKVYER---KGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLV 254
++ ++ R G + L + GVR + SL ++ +C ++ GR +H +
Sbjct: 34 LVSIFSRLCLDGPFTAALALLPDIAAAGVRADPVSLCRLIKLCVRHGTVGDGRAIHRHVS 93
Query: 255 RCQFDV------DVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQY-G 307
C ++V++ L++MY K G L +F +++V W ++++ A G
Sbjct: 94 LCAHGGGGATHGSLFVSNSLVSMYAKFGMLDDALELFGGMPQRNVVSWTTVVAALANAPG 153
Query: 308 LGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKS---KYLVEPKT 364
+++L+ EM GV + T VL AC G + +M + K ++
Sbjct: 154 RKKEALRFLVEMRRDGVAANSYTFSSVLGACGTPG-------VLAAMHADIIKVGLDSDV 206
Query: 365 EHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
+ ++D + G ++ + + M D ++W S++
Sbjct: 207 FVRSSLIDAYMKLGDLDSGRGVFDEM-VTCDLVVWNSIIAG 246
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 69/145 (47%), Gaps = 10/145 (6%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDM 62
+R+++ A++ Y + G + +A LF +M +++V+SW+ M+ G ++ R +A ++FD+
Sbjct: 302 DRDLILHNALLDMYCKCGCLLDADALFSRMHDRDVISWSTMISGLAQNGRSVEALKVFDL 361
Query: 63 M----PEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVIS-----WTTMISGYVNNN 113
M P + + ++ G V++G F M K I M+
Sbjct: 362 MKAEGPTPNNITMVGVLFACSHAGLVEDGWHYFRSMDKLFGIQPEREHCNCMVDLLGRAG 421
Query: 114 RIDVARKLF-EVMPEKNEVSWTAML 137
++D A K E+ E + V W +L
Sbjct: 422 KLDEAMKFIGEMKFEPDSVIWRTLL 446
>gi|356502930|ref|XP_003520267.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Glycine max]
Length = 780
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 234/651 (35%), Positives = 347/651 (53%), Gaps = 53/651 (8%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM-------PEK-------------NVVSW 40
+P+ N+ W ++RGY T++ +F M P K V+
Sbjct: 132 IPQPNLYCWNTLIRGYASSSDPTQSFLIFLHMLHSCSEFPNKFTFPFLFKAASRLKVLHL 191
Query: 41 TVMLGG-----------FIRDSRI---------DDARRLFDMMPEKDVVAQTNMVLGYCQ 80
+L G FI +S I D A R+F MP KDVV+ M+ +
Sbjct: 192 GSVLHGMVIKASLSSDLFILNSLINFYGSSGAPDLAHRVFTNMPGKDVVSWNAMINAFAL 251
Query: 81 DGRVDEGREIFDEMP----KKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSW--- 133
G D+ +F EM K NVI+ +++S ++ R + + E N +
Sbjct: 252 GGLPDKALLLFQEMEMKDVKPNVITMVSVLSACAKKIDLEFGRWICSYI-ENNGFTEHLI 310
Query: 134 --TAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKD 191
AML Y +CG I DA +LF M K +V+ +M+ G + G +A +FD M K
Sbjct: 311 LNNAMLDMYVKCGCINDAKDLFNKMSEKDIVSWTTMLDGHAKLGNYDEAHCIFDAMPHKW 370
Query: 192 DATWSGMIKVYERKGYELEVIDLFTLMQ-KEGVRVNFPSLISVLSVCASLASLDHGRQVH 250
A W+ +I YE+ G + LF MQ + + + +LI L A L ++D G +H
Sbjct: 371 TAAWNALISAYEQNGKPRVALSLFHEMQLSKDAKPDEVTLICALCASAQLGAIDFGHWIH 430
Query: 251 AQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGE 310
+ + +++ ++A+ L+ MY KCG L K +F KD+ +W+++I A YG G+
Sbjct: 431 VYIKKHDINLNCHLATSLLDMYAKCGNLNKAMEVFHAVERKDVYVWSAMIGALAMYGQGK 490
Query: 311 KSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACM 370
+L +F M + + P+ VT +L AC++ G V EG ++FE M+ Y + P+ +HY C+
Sbjct: 491 AALDLFSSMLEAYIKPNAVTFTNILCACNHAGLVNEGEQLFEQMEPLYGIVPQIQHYVCV 550
Query: 371 VDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNA 430
VD+ GRAG +E A IE MP P A +WG+LLGAC H ++LAE+A + LL+LEP N
Sbjct: 551 VDIFGRAGLLEKAASFIEKMPIPPTAAVWGALLGACSRHGNVELAELAYQNLLELEPCNH 610
Query: 431 GPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEH 490
G ++LLSNIYA G + V+ LRK MR +V K P CS I+V VH F D SHP
Sbjct: 611 GAFVLLSNIYAKAGDWEKVSNLRKLMRDSDVKKEPWCSSIDVNGIVHEFLVGD-NSHPFS 669
Query: 491 PMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKV-HSLRYHSEKLAVAYGLVKLPEGV 549
I L++I + GY PD S +L +E+ + SL HSEKLA+A+GL+
Sbjct: 670 QKIYSKLDEISEKFKPIGYKPDMSNLLQLSEEDNLMEQSLNVHSEKLAIAFGLISTASSQ 729
Query: 550 PIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
PIR++KN+R+CGDCH+ KL+S++ R+I+LRD RFHHF+ G CSC DYW
Sbjct: 730 PIRIVKNIRICGDCHAFAKLVSQLYDRDILLRDRYRFHHFRGGKCSCLDYW 780
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/361 (24%), Positives = 165/361 (45%), Gaps = 45/361 (12%)
Query: 87 GREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEK-----NEVSWTAMLMGYT 141
+ +F+++P+ N+ W T+I GY +++ + +F M N+ ++ + +
Sbjct: 125 AKNVFNQIPQPNLYCWNTLIRGYASSSDPTQSFLIFLHMLHSCSEFPNKFTFPFLFKAAS 184
Query: 142 QCGRIQDAWELFKAMPMKSVVAS-----NSMILGLGQNGEVQKARVVFDQMREKDDATWS 196
+ ++ + M +K+ ++S NS+I G +G A VF M KD +W+
Sbjct: 185 RL-KVLHLGSVLHGMVIKASLSSDLFILNSLINFYGSSGAPDLAHRVFTNMPGKDVVSWN 243
Query: 197 GMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRC 256
MI + G + + LF M+ + V+ N +++SVLS CA L+ GR + + +
Sbjct: 244 AMINAFALGGLPDKALLLFQEMEMKDVKPNVITMVSVLSACAKKIDLEFGRWICSYIENN 303
Query: 257 QFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIV---------------------- 294
F + + + ++ MY+KCG + K +F+ + KDIV
Sbjct: 304 GFTEHLILNNAMLDMYVKCGCINDAKDLFNKMSEKDIVSWTTMLDGHAKLGNYDEAHCIF 363
Query: 295 ---------MWNSIISGYAQYGLGEKSLKVFHEM-FSSGVMPDDVTLVGVLSACSYTGKV 344
WN++IS Y Q G +L +FHEM S PD+VTL+ L A + G +
Sbjct: 364 DAMPHKWTAAWNALISAYEQNGKPRVALSLFHEMQLSKDAKPDEVTLICALCASAQLGAI 423
Query: 345 KEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLG 404
G I +K K+ + ++D+ + G + AM++ A+ D +W +++G
Sbjct: 424 DFGHWIHVYIK-KHDINLNCHLATSLLDMYAKCGNLNKAMEVFHAVE-RKDVYVWSAMIG 481
Query: 405 A 405
A
Sbjct: 482 A 482
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 86/194 (44%), Gaps = 18/194 (9%)
Query: 220 KEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYI--KCGE 277
++G V +++ + C + L +Q+HA ++R D Y AS L+T Y C
Sbjct: 65 EKGNEVESTNILEFIDQCTNTMQL---KQIHAHMLRTSRFCDPYTASKLLTAYAISSCSC 121
Query: 278 LVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVF-HEMFSSGVMPDDVTLVGVLS 336
L+ K +F+ ++ WN++I GYA +S +F H + S P+ T +
Sbjct: 122 LIYAKNVFNQIPQPNLYCWNTLIRGYASSSDPTQSFLIFLHMLHSCSEFPNKFTFPFLFK 181
Query: 337 ACS-----YTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMP 391
A S + G V G I S+ S + +++ G +G + A ++ MP
Sbjct: 182 AASRLKVLHLGSVLHGMVIKASLSSDLFI------LNSLINFYGSSGAPDLAHRVFTNMP 235
Query: 392 FEPDAIIWGSLLGA 405
+ D + W +++ A
Sbjct: 236 GK-DVVSWNAMINA 248
>gi|224135349|ref|XP_002322051.1| predicted protein [Populus trichocarpa]
gi|222869047|gb|EEF06178.1| predicted protein [Populus trichocarpa]
Length = 924
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 216/614 (35%), Positives = 349/614 (56%), Gaps = 18/614 (2%)
Query: 4 RNVVSWTAMVRGYVEEGMITEAGTLFWQMP------EKNVVSWTVMLGGFIRDSRIDDAR 57
+NVVSW M+ + EG + EA L +M + N V+ +L + ++ +
Sbjct: 312 KNVVSWNTMISAFSLEGDVNEAFNLLQEMQIQGEEMKANEVTILNVLPACLDKLQLRSLK 371
Query: 58 RLFDMMPE---KDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNR 114
L + V +L Y + G ++ ++F + K V SW +I G+ N
Sbjct: 372 ELHGYSFRHCFQHVELSNAFILAYAKCGALNSAEKVFHGIGDKTVSSWNALIGGHAQNGD 431
Query: 115 IDVA-RKLFEVMPEKNEVSW---TAMLMGYTQCGRIQDAWELFKAMPMKSV----VASNS 166
A LF++ + W +++L+ +Q E+ + + S
Sbjct: 432 PRKALHLLFQMTYSGQQPDWFTISSLLLACAHLKSLQYGKEIHGYVLRNGLETDFFVGTS 491
Query: 167 MILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVN 226
++ G+ ARV+FD+M++K+ +W+ MI Y + G E + LF EG++ +
Sbjct: 492 LLSHYIHCGKASSARVLFDRMKDKNLVSWNAMISGYSQNGLPYESLALFRKSLSEGIQSH 551
Query: 227 FPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFD 286
+++SV C+ L++L G++ H +++ D +V +I MY K G + + + +FD
Sbjct: 552 EIAIVSVFGACSQLSALRLGKEAHGYVLKALQTEDAFVGCSIIDMYAKSGCIKESRKVFD 611
Query: 287 NFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKE 346
K++ WN+II + +G G+++++++ M G MPD T +G+L AC + G V+E
Sbjct: 612 GLKDKNVASWNAIIVAHGIHGHGKEAIELYERMKKVGQMPDRFTYIGILMACGHAGLVEE 671
Query: 347 GREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGAC 406
G + F+ M++ L+EPK EHYAC++D+L RAG+++DA++L+ MP E D IW SLL +C
Sbjct: 672 GLKYFKEMQNFNLIEPKLEHYACLIDMLARAGRLDDALRLVNEMPEEADNRIWSSLLRSC 731
Query: 407 RTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPG 466
RT L++ E AKKLL+LEP A Y+LLSN+YA G++ V +R+ M++ + K G
Sbjct: 732 RTFGALEIGEKVAKKLLELEPDKAENYVLLSNLYAGLGKWDGVRRVRQMMKEIGLQKDAG 791
Query: 467 CSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKV 526
CSWIEV +V+ F D + P+ I + ++ + E GY P++S VLH+V EEEK+
Sbjct: 792 CSWIEVGGRVYSFVVGDSL-QPKSAEIRVIWRRLEERISEIGYKPNTSSVLHEVGEEEKI 850
Query: 527 HSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRF 586
LR HSEKLA+++GL+K +G +R+ KNLR+C DCH+A KLISK + REI++RD RF
Sbjct: 851 DILRGHSEKLAISFGLLKTTKGTTLRIYKNLRICADCHNAAKLISKAVEREIVVRDNKRF 910
Query: 587 HHFKDGLCSCRDYW 600
HHF+DGLCSC DYW
Sbjct: 911 HHFRDGLCSCCDYW 924
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 121/488 (24%), Positives = 241/488 (49%), Gaps = 31/488 (6%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEK-----NVVSWTVMLGGFIRDSRIDD 55
MPE N+VSW +M+ + E G ++ L +M + +VV+ +L + +D
Sbjct: 207 MPETNLVSWNSMICAFSENGFSRDSFDLLMEMLGEEGLLPDVVTVVTILPVCAGEGEVDI 266
Query: 56 ARRLFDMMPE----KDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVN 111
+ + + ++V+ MV Y + G ++E + F + KNV+SW TMIS +
Sbjct: 267 GMGIHGLAVKLGLSEEVMVNNAMVYMYSKCGYLNEAQMSFVKNNNKNVVSWNTMISAFSL 326
Query: 112 NNRIDVARKLFEVMP------EKNEVSWTAMLMGYTQCGRIQDAWEL----FKAMPMKSV 161
++ A L + M + NEV+ +L +++ EL F+ + V
Sbjct: 327 EGDVNEAFNLLQEMQIQGEEMKANEVTILNVLPACLDKLQLRSLKELHGYSFRHC-FQHV 385
Query: 162 VASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKE 221
SN+ IL + G + A VF + +K ++W+ +I + + G + + L M
Sbjct: 386 ELSNAFILAYAKCGALNSAEKVFHGIGDKTVSSWNALIGGHAQNGDPRKALHLLFQMTYS 445
Query: 222 GVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKG 281
G + ++ ++ S+L CA L SL +G+++H ++R + D +V + L++ YI CG+
Sbjct: 446 GQQPDWFTISSLLLACAHLKSLQYGKEIHGYVLRNGLETDFFVGTSLLSHYIHCGKASSA 505
Query: 282 KLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYT 341
+++FD K++V WN++ISGY+Q GL +SL +F + S G+ ++ +V V ACS
Sbjct: 506 RVLFDRMKDKNLVSWNAMISGYSQNGLPYESLALFRKSLSEGIQSHEIAIVSVFGACSQL 565
Query: 342 GKVKEGREIFESMKSKYLVEPKTEHYAC-MVDLLGRAGQVEDAMKLIEAMPFEPDAIIWG 400
++ G+E + ++ + C ++D+ ++G ++++ K+ + + + + W
Sbjct: 566 SALRLGKEAHGYVLKA--LQTEDAFVGCSIIDMYAKSGCIKESRKVFDGLK-DKNVASWN 622
Query: 401 SLLGACRTH----MKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNM 456
+++ A H ++L E KK+ Q+ + IL++ +A G + + K M
Sbjct: 623 AIIVAHGIHGHGKEAIELYE-RMKKVGQMPDRFTYIGILMACGHA--GLVEEGLKYFKEM 679
Query: 457 RKRNVIKP 464
+ N+I+P
Sbjct: 680 QNFNLIEP 687
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 125/524 (23%), Positives = 219/524 (41%), Gaps = 73/524 (13%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM-------PEKNVVSWTVMLGGFIRDSRI 53
M +N++ W A+V GY G+ + +F + P+ + G I D R+
Sbjct: 105 METKNLIQWNALVSGYTRNGLYGDVVKVFMDLVSDTDFQPDNFTFPSVIKACGGILDVRL 164
Query: 54 DDARR--LFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVN 111
+ + M DV +V Y + G VDE ++FD MP+ N++SW +MI +
Sbjct: 165 GEVIHGMVIKMGLVLDVFVGNALVGMYGKCGAVDEAMKVFDFMPETNLVSWNSMICAFSE 224
Query: 112 NN-RIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWEL----FKAMPMKSVV 162
N D L E++ E+ + V+ +L G + + K + V+
Sbjct: 225 NGFSRDSFDLLMEMLGEEGLLPDVVTVVTILPVCAGEGEVDIGMGIHGLAVKLGLSEEVM 284
Query: 163 ASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEG 222
+N+M+ + G + +A++ F + K+ +W+ MI + +G E +L MQ +G
Sbjct: 285 VNNAMVYMYSKCGYLNEAQMSFVKNNNKNVVSWNTMISAFSLEGDVNEAFNLLQEMQIQG 344
Query: 223 --VRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVK 280
++ N ++++VL C L +++H R F V +++ I Y KCG L
Sbjct: 345 EEMKANEVTILNVLPACLDKLQLRSLKELHGYSFRHCFQ-HVELSNAFILAYAKCGALNS 403
Query: 281 GKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACS- 339
+ +F K + WN++I G+AQ G K+L + +M SG PD T+ +L AC+
Sbjct: 404 AEKVFHGIGDKTVSSWNALIGGHAQNGDPRKALHLLFQMTYSGQQPDWFTISSLLLACAH 463
Query: 340 ----------------------------------YTGKVKEGREIFESMKSKYLVEPKTE 365
+ GK R +F+ MK K LV
Sbjct: 464 LKSLQYGKEIHGYVLRNGLETDFFVGTSLLSHYIHCGKASSARVLFDRMKDKNLVS---- 519
Query: 366 HYACMVDLLGRAGQVEDAMKLI-----EAMPFEPDAIIWGSLLGACRTHMKLDLAEVA-- 418
+ M+ + G +++ L E + AI+ S+ GAC L L + A
Sbjct: 520 -WNAMISGYSQNGLPYESLALFRKSLSEGIQSHEIAIV--SVFGACSQLSALRLGKEAHG 576
Query: 419 -AKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNV 461
K LQ E G I+ ++YA G + ++ ++ +NV
Sbjct: 577 YVLKALQTEDAFVGCSII--DMYAKSGCIKESRKVFDGLKDKNV 618
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/330 (26%), Positives = 159/330 (48%), Gaps = 25/330 (7%)
Query: 29 FWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPE-----KDVVAQTNMVLGYCQDGR 83
F + K + + G +D I+ RRL + + D V T ++ Y G
Sbjct: 37 FISLQAKEAIGLLLQACGNQKD--IETGRRLHKFVSDSTHYRNDYVLNTRLIKMYAMCGS 94
Query: 84 VDEGREIFDEMPKKNVISWTTMISGYVNNNRI-DVARKLFEVMPEKN----EVSWTAMLM 138
+ R +FD M KN+I W ++SGY N DV + +++ + + ++ +++
Sbjct: 95 PLDSRLVFDNMETKNLIQWNALVSGYTRNGLYGDVVKVFMDLVSDTDFQPDNFTFPSVI- 153
Query: 139 GYTQCGRIQDA--WELFKAMPMK-----SVVASNSMILGLGQNGEVQKARVVFDQMREKD 191
CG I D E+ M +K V N+++ G+ G V +A VFD M E +
Sbjct: 154 --KACGGILDVRLGEVIHGMVIKMGLVLDVFVGNALVGMYGKCGAVDEAMKVFDFMPETN 211
Query: 192 DATWSGMIKVYERKGYELEVIDLFT-LMQKEGVRVNFPSLISVLSVCASLASLDHGRQVH 250
+W+ MI + G+ + DL ++ +EG+ + +++++L VCA +D G +H
Sbjct: 212 LVSWNSMICAFSENGFSRDSFDLLMEMLGEEGLLPDVVTVVTILPVCAGEGEVDIGMGIH 271
Query: 251 AQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGE 310
V+ +V V + ++ MY KCG L + ++ F +K++V WN++IS ++ G
Sbjct: 272 GLAVKLGLSEEVMVNNAMVYMYSKCGYLNEAQMSFVKNNNKNVVSWNTMISAFSLEGDVN 331
Query: 311 KSLKVFHEMFSSG--VMPDDVTLVGVLSAC 338
++ + EM G + ++VT++ VL AC
Sbjct: 332 EAFNLLQEMQIQGEEMKANEVTILNVLPAC 361
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 99/218 (45%), Gaps = 18/218 (8%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRL- 59
M ++N+VSW AM+ GY + G+ E+ LF + + + S + + A RL
Sbjct: 512 MKDKNLVSWNAMISGYSQNGLPYESLALFRKSLSEGIQSHEIAIVSVFGACSQLSALRLG 571
Query: 60 -------FDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+ +D +++ Y + G + E R++FD + KNV SW +I + +
Sbjct: 572 KEAHGYVLKALQTEDAFVGCSIIDMYAKSGCIKESRKVFDGLKDKNVASWNAIIVAHGIH 631
Query: 113 NRIDVARKLFEVMPEKNEV----SWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASN--- 165
A +L+E M + ++ ++ +LM G +++ + FK M +++
Sbjct: 632 GHGKEAIELYERMKKVGQMPDRFTYIGILMACGHAGLVEEGLKYFKEMQNFNLIEPKLEH 691
Query: 166 --SMILGLGQNGEVQKA-RVVFDQMREKDDATWSGMIK 200
+I L + G + A R+V + E D+ WS +++
Sbjct: 692 YACLIDMLARAGRLDDALRLVNEMPEEADNRIWSSLLR 729
>gi|302762388|ref|XP_002964616.1| hypothetical protein SELMODRAFT_82072 [Selaginella moellendorffii]
gi|300168345|gb|EFJ34949.1| hypothetical protein SELMODRAFT_82072 [Selaginella moellendorffii]
Length = 795
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 214/615 (34%), Positives = 348/615 (56%), Gaps = 17/615 (2%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMP-EKNVVSWTVMLGGFIRDSRIDDARRL 59
M R+V SW AM+ Y + G EA L+ M E +V ++T +L +D R++
Sbjct: 183 MSGRSVSSWNAMIAAYAQSGHFEEAIRLYEDMDVEPSVRTFTSVLSACSNLGLLDQGRKI 242
Query: 60 FDMMP----EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRI 115
++ E D+ Q ++ Y + +D+ +IF +P+++V+SW+ MI+ + +
Sbjct: 243 HALISSRGTELDLSLQNALLTMYARCKCLDDAAKIFQRLPRRDVVSWSAMIAAFAETDLF 302
Query: 116 DVARKLFEVMP----EKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMK----SVVASNSM 167
D A + + M N ++ ++L+ G ++ + + ++V ++
Sbjct: 303 DEAIEFYSKMQLEGVRPNYYTFASVLLACASVGDLRAGRAVHDQILGNGYKITLVNGTAL 362
Query: 168 ILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNF 227
+ G + +AR +FDQ+ +D+ W+ +I Y ++G+ V++L+ M K +V
Sbjct: 363 VDLYTSYGSLDEARSLFDQIENRDEGLWTVLIGGYSKQGHRTGVLELYREM-KNTTKVPA 421
Query: 228 PSLI--SVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIF 285
+I V+S CASL + RQ H+ + D +A+ L+ MY + G L + +F
Sbjct: 422 TKIIYSCVISACASLGAFADARQAHSDIEADGMISDFVLATSLVNMYSRWGNLESARQVF 481
Query: 286 DNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVK 345
D +S+D + W ++I+GYA++G +L ++ EM G P ++T + VL ACS+ G +
Sbjct: 482 DKMSSRDTLAWTTLIAGYAKHGEHGLALGLYKEMELEGAEPSELTFMVVLYACSHAGLQE 541
Query: 346 EGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
+G+++F S++S Y + P HY+C++DLL RAG++ DA +LI AMP EP+ + W SLLGA
Sbjct: 542 QGKQLFISIQSDYAMHPNIAHYSCIIDLLSRAGRLSDAEELINAMPVEPNDVTWSSLLGA 601
Query: 406 CRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPP 465
R H + A AA ++ +L+P + Y+LLSN++A G +A +R M R V K
Sbjct: 602 SRIHKDVKRATHAAGQITKLDPVDPASYVLLSNVHAVTGNLAGMASVRNTMVARGVKKRR 661
Query: 466 GCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEK 525
G SWIEV ++H F D SHP I L+++ ++EAGY P+S VLHDV E+EK
Sbjct: 662 GSSWIEVADQIHEFNVGDN-SHPRFQEIFAELQRLSPKIKEAGYVPESEEVLHDVGEKEK 720
Query: 526 VHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANR 585
LR HSEKLA+A+GL+ G +R+ LR+C DCHSA+K IS + REII+RD++R
Sbjct: 721 ELLLRLHSEKLAIAFGLIATAPGTTLRIFNTLRICHDCHSAVKFISAIARREIIVRDSSR 780
Query: 586 FHHFKDGLCSCRDYW 600
FH F+DG CSC DYW
Sbjct: 781 FHKFRDGQCSCGDYW 795
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 115/480 (23%), Positives = 213/480 (44%), Gaps = 46/480 (9%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMP 64
NV +VR Y + G + A F + KN SW ML + ++ A L+ M
Sbjct: 57 NVFLGNEIVRAYGKCGSVASARAAFDAIARKNDYSWGSMLTAYAQNGHYRAALDLYKRMD 116
Query: 65 EKDVVAQTNMVLGYCQDGR-VDEGREIFDEMP-----KKNVISWTTMISGYVNNNRIDVA 118
+ VLG C + ++EG+ I + K +VI ++++ Y ++ A
Sbjct: 117 LQPNPVVYTTVLGACASIKALEEGKAIHSRISGTKGLKLDVILENSLLTMYAKCGSLEDA 176
Query: 119 RKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMI------LGLG 172
++LFE M ++ SW AM+ Y Q G ++A L++ M ++ V + + + LGL
Sbjct: 177 KRLFERMSGRSVSSWNAMIAAYAQSGHFEEAIRLYEDMDVEPSVRTFTSVLSACSNLGLL 236
Query: 173 QNGE------------------------------VQKARVVFDQMREKDDATWSGMIKVY 202
G + A +F ++ +D +WS MI +
Sbjct: 237 DQGRKIHALISSRGTELDLSLQNALLTMYARCKCLDDAAKIFQRLPRRDVVSWSAMIAAF 296
Query: 203 ERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDV 262
E I+ ++ MQ EGVR N+ + SVL CAS+ L GR VH Q++ + + +
Sbjct: 297 AETDLFDEAIEFYSKMQLEGVRPNYYTFASVLLACASVGDLRAGRAVHDQILGNGYKITL 356
Query: 263 YVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSS 322
+ L+ +Y G L + + +FD ++D +W +I GY++ G L+++ EM ++
Sbjct: 357 VNGTALVDLYTSYGSLDEARSLFDQIENRDEGLWTVLIGGYSKQGHRTGVLELYREMKNT 416
Query: 323 GVMP-DDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVE 381
+P + V+SAC+ G + R+ +++ ++ + +V++ R G +E
Sbjct: 417 TKVPATKIIYSCVISACASLGAFADARQAHSDIEADGMISDFVLATS-LVNMYSRWGNLE 475
Query: 382 DAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYA 441
A ++ + M D + W +L+ H + LA + K ++LE + +YA
Sbjct: 476 SARQVFDKMS-SRDTLAWTTLIAGYAKHGEHGLA-LGLYKEMELEGAEPSELTFMVVLYA 533
>gi|147805129|emb|CAN64485.1| hypothetical protein VITISV_035038 [Vitis vinifera]
Length = 1740
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 221/589 (37%), Positives = 319/589 (54%), Gaps = 77/589 (13%)
Query: 88 REIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVM------PEK------------N 129
R IFDE+PKKNV+ + MI YVNN+ A +F+ M P+ +
Sbjct: 1080 RHIFDEIPKKNVVFFNVMIRSYVNNHLYSDALLVFKNMAGHGIDPDHYTYPCVLKASSGS 1139
Query: 130 EVSWTAMLMG---------------------YTQCGRIQDAWELFKAMPMKSVVASNSMI 168
E W M + Y +CG + +A + MP + VV+ NS++
Sbjct: 1140 EDLWVGMQIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVLDZMPCRDVVSWNSLV 1199
Query: 169 LGLGQNGEVQKA-------------------------------------RVVFDQMREKD 191
G +NG+ A + +F ++ K
Sbjct: 1200 AGCARNGQFDDALEVCKEMELLGLKPDAGTMASLLPAVTNTCLDNVSFVKEMFMKLANKS 1259
Query: 192 DATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHA 251
+W+ MI VY E +D+F M+ V + S+ SVL C L++L GR++H
Sbjct: 1260 LVSWNVMIAVYMNNSMPAEAVDIFLQMEDHAVDPDAISIASVLPACGDLSALLLGRRIHE 1319
Query: 252 QLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEK 311
+VR + ++ + + LI MY KCG L + +FD +D+V W S+IS Y G G
Sbjct: 1320 YVVRKRLQPNLLLENALIDMYAKCGCLEYAREVFDQMKFRDVVSWTSMISAYGMNGKGRD 1379
Query: 312 SLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMV 371
++ +F M G+ PD + V VLSACS+ G + EGR F+ M + + P+ EH+ CMV
Sbjct: 1380 AVSLFSRMQDLGLNPDSIAFVSVLSACSHAGLLDEGRYYFKLMTEECKIVPRIEHFVCMV 1439
Query: 372 DLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAG 431
DLLGRAGQV++A I+ MP EP+ +WG+LL ACR + + + +AA +L QL P+ +G
Sbjct: 1440 DLLGRAGQVDEAYGFIKQMPMEPNERVWGALLSACRVYSNMIIGLLAADQLFQLCPEQSG 1499
Query: 432 PYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHP 491
Y+LLSNIYA GR+ DV +R M+ + + K PG S E++ +VH F D SHP+
Sbjct: 1500 YYVLLSNIYAKAGRWEDVTTVRSIMKTKGIKKMPGVSNFELDNRVHTFLAGD-QSHPQSK 1558
Query: 492 MIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPI 551
I L+ + G ++EAGY P++ LHDV+EE+K L HSEKLA+A+ ++ G PI
Sbjct: 1559 QIYEELDVLVGKMKEAGYVPETDSALHDVEEEDKECHLAVHSEKLAIAFAILNTAPGSPI 1618
Query: 552 RVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
R+ KNLRVCGDCH A KLISK++GREI +RD NRFHHF +G+CSC DYW
Sbjct: 1619 RITKNLRVCGDCHIAAKLISKIVGREITIRDTNRFHHFYNGVCSCGDYW 1667
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 95/326 (29%), Positives = 153/326 (46%), Gaps = 31/326 (9%)
Query: 175 GEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVL 234
GE R +FD++ +K+ ++ MI+ Y + + +F M G+ + + VL
Sbjct: 1074 GEPWSTRHIFDEIPKKNVVFFNVMIRSYVNNHLYSDALLVFKNMAGHGIDPDHYTYPCVL 1133
Query: 235 SVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIV 294
+ L G Q+HA +VR D++V+V + LI+MY KCG LV+ + D +D+V
Sbjct: 1134 KASSGSEDLWVGMQIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVLDZMPCRDVV 1193
Query: 295 MWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYT--GKVKEGREIFE 352
WNS+++G A+ G + +L+V EM G+ PD T+ +L A + T V +E+F
Sbjct: 1194 SWNSLVAGCARNGQFDDALEVCKEMELLGLKPDAGTMASLLPAVTNTCLDNVSFVKEMFM 1253
Query: 353 SMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKL---IEAMPFEPDAIIWGSLLGACRTH 409
+ +K LV + M+ + +A+ + +E +PDAI S+L AC
Sbjct: 1254 KLANKSLVS-----WNVMIAVYMNNSMPAEAVDIFLQMEDHAVDPDAISIASVLPACGDL 1308
Query: 410 MKLDLA----EVAAKKLLQLEPKNAGPYILLSN----IYASQGRFHDVAELRKNMRKRNV 461
L L E +K LQ P +LL N +YA G E+ M+ R+V
Sbjct: 1309 SALLLGRRIHEYVVRKRLQ-------PNLLLENALIDMYAKCGCLEYAREVFDQMKFRDV 1361
Query: 462 IKPPGCSWIEVEKKVHMF-TGRDCVS 486
+ SW + M GRD VS
Sbjct: 1362 V-----SWTSMISAYGMNGKGRDAVS 1382
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 128/266 (48%), Gaps = 32/266 (12%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDA------RR 58
NV ++ Y + G + EA + ZMP ++VVSW ++ G R+ + DDA
Sbjct: 1160 NVFVGNGLISMYGKCGCLVEACRVLDZMPCRDVVSWNSLVAGCARNGQFDDALEVCKEME 1219
Query: 59 LFDMMPEKDVVAQ-TNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDV 117
L + P+ +A V C D V +E+F ++ K+++SW MI+ Y+NN+
Sbjct: 1220 LLGLKPDAGTMASLLPAVTNTCLDN-VSFVKEMFMKLANKSLVSWNVMIAVYMNNSMPAE 1278
Query: 118 ARKLF----------------EVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSV 161
A +F V+P ++S A+L+G RI + + P ++
Sbjct: 1279 AVDIFLQMEDHAVDPDAISIASVLPACGDLS--ALLLGR----RIHEYVVRKRLQP--NL 1330
Query: 162 VASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKE 221
+ N++I + G ++ AR VFDQM+ +D +W+ MI Y G + + LF+ MQ
Sbjct: 1331 LLENALIDMYAKCGCLEYAREVFDQMKFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQDL 1390
Query: 222 GVRVNFPSLISVLSVCASLASLDHGR 247
G+ + + +SVLS C+ LD GR
Sbjct: 1391 GLNPDSIAFVSVLSACSHAGLLDEGR 1416
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 103/217 (47%), Gaps = 18/217 (8%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV----VSWTVMLGGFIRDSRIDDA 56
+ +++VSW M+ Y+ M EA +F QM + V +S +L S +
Sbjct: 1255 LANKSLVSWNVMIAVYMNNSMPAEAVDIFLQMEDHAVDPDAISIASVLPACGDLSALLLG 1314
Query: 57 RRLFDMMPEK----DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
RR+ + + K +++ + ++ Y + G ++ RE+FD+M ++V+SWT+MIS Y N
Sbjct: 1315 RRIHEYVVRKRLQPNLLLENALIDMYAKCGCLEYAREVFDQMKFRDVVSWTSMISAYGMN 1374
Query: 113 NRIDVARKLFEVMPE----KNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASN--- 165
+ A LF M + + +++ ++L + G + + FK M + +
Sbjct: 1375 GKGRDAVSLFSRMQDLGLNPDSIAFVSVLSACSHAGLLDEGRYYFKLMTEECKIVPRIEH 1434
Query: 166 --SMILGLGQNGEVQKARVVFDQMR-EKDDATWSGMI 199
M+ LG+ G+V +A QM E ++ W ++
Sbjct: 1435 FVCMVDLLGRAGQVDEAYGFIKQMPMEPNERVWGALL 1471
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 77/162 (47%), Gaps = 4/162 (2%)
Query: 268 LITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPD 327
L+ Y CGE + IFD K++V +N +I Y L +L VF M G+ PD
Sbjct: 1066 LMRAYAVCGEPWSTRHIFDEIPKKNVVFFNVMIRSYVNNHLYSDALLVFKNMAGHGIDPD 1125
Query: 328 DVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLI 387
T VL A S + + G +I ++ + ++ ++ + G+ G + +A +++
Sbjct: 1126 HYTYPCVLKASSGSEDLWVGMQIHAAV-VRVGLDLNVFVGNGLISMYGKCGCLVEACRVL 1184
Query: 388 EAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAK--KLLQLEP 427
+ MP D + W SL+ C + + D A K +LL L+P
Sbjct: 1185 DZMPCR-DVVSWNSLVAGCARNGQFDDALEVCKEMELLGLKP 1225
>gi|357468161|ref|XP_003604365.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355505420|gb|AES86562.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 874
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 222/644 (34%), Positives = 347/644 (53%), Gaps = 52/644 (8%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV----VSWTVMLGGFIRDSRIDDA 56
+P+ +V W M++GY +L+ M N+ ++ +L GF +D +
Sbjct: 95 IPQPSVFIWNTMIKGYSRINCSESGVSLYKLMLVHNIKPDGFTFPFLLKGFTKDMALKYG 154
Query: 57 RRLFDM-----MPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVN 111
+ L + + ++ Q + + G V+ R+IFD V++W ++SGY
Sbjct: 155 KVLLNHAVIHGFLDSNLFVQKGFIHLFSLCGLVNYARKIFDMGDGWEVVTWNVVLSGYNR 214
Query: 112 NNRIDVARKLFEVMPEK------NEVSWTAMLMG-------------------------- 139
R + +++LF M +K N V+ ML
Sbjct: 215 FKRYEESKRLFIEMEKKCECVSPNSVTLVLMLSACSKLKDLVGGKCIYNKYIKEGIVEPN 274
Query: 140 ----------YTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMRE 189
+ CG + A +F M + V++ S++ G + AR FDQM E
Sbjct: 275 LILENALIDMFASCGEMDAARGVFDEMKTRDVISWTSIVTGFANTCRIDLARKYFDQMPE 334
Query: 190 KDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQV 249
+D +W+ MI Y R EV+ LF MQ V+ + +++S+L+ CA L +L+ G
Sbjct: 335 RDYVSWTAMIDGYLRMNRFKEVLTLFRDMQMSNVKPDEFTMVSILTACAHLGALELGEWA 394
Query: 250 HAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLG 309
+ + + D ++ + LI MY KCG + K K IF+ KD W ++I G A G G
Sbjct: 395 KTYIDKNKIKNDTFIGNALIDMYFKCGNVEKAKKIFNEMQKKDKFTWTAMIVGLANNGHG 454
Query: 310 EKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYAC 369
E++L +F M + V PD++T +GV+ AC++ G V +G+ F +M ++ ++P HY C
Sbjct: 455 EEALTMFSYMLEASVTPDEITYIGVMCACTHVGLVAKGKHFFSNMAVQHGIKPNLTHYGC 514
Query: 370 MVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKN 429
MVDLLGRAG +++A+++I MP +P++I+WGSLLGACR H + LAE+AA ++L+LEP+N
Sbjct: 515 MVDLLGRAGHLKEALEVIMNMPVKPNSIVWGSLLGACRVHKNVQLAEMAANEILELEPEN 574
Query: 430 AGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPE 489
Y+LL NIYA+ ++ ++ +RK M +R + K PGCS +E+ V+ F D SHP+
Sbjct: 575 GAVYVLLCNIYAACKKWKNLHNVRKMMMERGIKKIPGCSLMEMNGIVYEFVAGD-KSHPQ 633
Query: 490 HPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGV 549
I LE + L AGY PD+S V DV EE+K +L HSEKLA+AY L+ +GV
Sbjct: 634 SKEIYAKLENMKQDLSNAGYSPDTSEVFLDVGEEDKETALYMHSEKLAIAYALISSGKGV 693
Query: 550 PIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGL 593
IR++KNLR+C DCH ++SKV RE+I+RD RFHHF+ GL
Sbjct: 694 TIRIVKNLRMCVDCHHMAMVVSKVYNRELIVRDKTRFHHFRHGL 737
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 97/376 (25%), Positives = 174/376 (46%), Gaps = 50/376 (13%)
Query: 75 VLGYC---QDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKN-- 129
V+ +C + G V R++FDE+P+ +V W TMI GY N + L+++M N
Sbjct: 73 VIIFCCTKESGDVYYARKVFDEIPQPSVFIWNTMIKGYSRINCSESGVSLYKLMLVHNIK 132
Query: 130 --EVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASN-----SMILGLGQNGEVQKARV 182
++ +L G+T+ ++ L + + SN I G V AR
Sbjct: 133 PDGFTFPFLLKGFTKDMALKYGKVLLNHAVIHGFLDSNLFVQKGFIHLFSLCGLVNYARK 192
Query: 183 VFDQMREKDDATWSGMIKVYER-KGYELEVIDLFTLMQK--EGVRVNFPSLISVLSVCAS 239
+FD + TW+ ++ Y R K YE E LF M+K E V N +L+ +LS C+
Sbjct: 193 IFDMGDGWEVVTWNVVLSGYNRFKRYE-ESKRLFIEMEKKCECVSPNSVTLVLMLSACSK 251
Query: 240 LASLDHGRQVHAQLVRCQF-DVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNS 298
L L G+ ++ + ++ + ++ + + LI M+ CGE+ + +FD ++D++ W S
Sbjct: 252 LKDLVGGKCIYNKYIKEGIVEPNLILENALIDMFASCGEMDAARGVFDEMKTRDVISWTS 311
Query: 299 IISGYA---QYGLGEKS----------------------------LKVFHEMFSSGVMPD 327
I++G+A + L K L +F +M S V PD
Sbjct: 312 IVTGFANTCRIDLARKYFDQMPERDYVSWTAMIDGYLRMNRFKEVLTLFRDMQMSNVKPD 371
Query: 328 DVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLI 387
+ T+V +L+AC++ G ++ G E ++ K ++ T ++D+ + G VE A K+
Sbjct: 372 EFTMVSILTACAHLGALELG-EWAKTYIDKNKIKNDTFIGNALIDMYFKCGNVEKAKKIF 430
Query: 388 EAMPFEPDAIIWGSLL 403
M + D W +++
Sbjct: 431 NEMQ-KKDKFTWTAMI 445
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 152/320 (47%), Gaps = 15/320 (4%)
Query: 155 AMPMKSVVASNSMILG-------LGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGY 207
+ +K+ ++SN + L ++G+V AR VFD++ + W+ MIK Y R
Sbjct: 56 SQTIKTGLSSNHLFLTKVIIFCCTKESGDVYYARKVFDEIPQPSVFIWNTMIKGYSRINC 115
Query: 208 ELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQF-DVDVYVAS 266
+ L+ LM ++ + + +L +L +G+ + V F D +++V
Sbjct: 116 SESGVSLYKLMLVHNIKPDGFTFPFLLKGFTKDMALKYGKVLLNHAVIHGFLDSNLFVQK 175
Query: 267 VLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSS--GV 324
I ++ CG + + IFD ++V WN ++SGY ++ E+S ++F EM V
Sbjct: 176 GFIHLFSLCGLVNYARKIFDMGDGWEVVTWNVVLSGYNRFKRYEESKRLFIEMEKKCECV 235
Query: 325 MPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAM 384
P+ VTLV +LSACS + G+ I+ + +VEP ++D+ G+++ A
Sbjct: 236 SPNSVTLVLMLSACSKLKDLVGGKCIYNKYIKEGIVEPNLILENALIDMFASCGEMDAAR 295
Query: 385 KLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQG 444
+ + M D I W S++ ++DLA K Q+ ++ + + + Y
Sbjct: 296 GVFDEMK-TRDVISWTSIVTGFANTCRIDLAR---KYFDQMPERDYVSWTAMIDGYLRMN 351
Query: 445 RFHDVAELRKNMRKRNVIKP 464
RF +V L ++M+ NV KP
Sbjct: 352 RFKEVLTLFRDMQMSNV-KP 370
>gi|125584568|gb|EAZ25232.1| hypothetical protein OsJ_09035 [Oryza sativa Japonica Group]
Length = 674
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 211/508 (41%), Positives = 318/508 (62%), Gaps = 18/508 (3%)
Query: 108 GYVNNNRIDVARKLFEVMPEKNEVSW---TAMLMGYTQCGRIQDAWELFKAMPM------ 158
GYV NN + + +LF M + S A L+ ++ R+ D +
Sbjct: 170 GYVRNNLVYHSLELFRAMIASDSASVVDEAAALVAFSASARVPDRGVTASLHALIAKIGF 229
Query: 159 -KSVVASNSMILGLGQNG--EVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLF 215
++ N+M+ + G +++ AR VFD M E+D +W+ MI +Y + G E I L+
Sbjct: 230 ERNAGVVNTMLDSYAKGGSRDLEVARKVFDTM-ERDVVSWNSMIALYAQNGMSAEAIGLY 288
Query: 216 TLMQK--EGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYI 273
+ M G++ N +L +VL CA ++ G+++H Q+VR + +VYV + ++ MY
Sbjct: 289 SKMLNVGGGIKCNAVALSAVLLACAHAGAIQTGKRIHNQVVRMGLEENVYVGTSIVDMYS 348
Query: 274 KCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVG 333
KCG + F K+I+ W+++I+GY +G G+++L++F EM SG+ P+ +T +
Sbjct: 349 KCGRVEMASRAFRKIKEKNILSWSAMITGYGMHGRGQEALEIFTEMKRSGLRPNYITFIS 408
Query: 334 VLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFE 393
VL+ACS+ G + EGR + +MK ++ +E EHY CMVDLLGRAG +++A LI+ M +
Sbjct: 409 VLAACSHAGLLDEGRYWYNAMKQEFGIEAGVEHYGCMVDLLGRAGCLDEAYSLIKEMKVK 468
Query: 394 PDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELR 453
PDA IWG+LL ACR H ++LAE++ K+L +L+ N+G Y+LLSNIYA + DV +R
Sbjct: 469 PDAAIWGALLSACRIHKNVELAEMSVKRLFELDASNSGYYVLLSNIYAEARMWKDVERIR 528
Query: 454 KNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDS 513
++ R + KPPG S E++ K+++F D SHP+H I LEK+ ++EAGY P++
Sbjct: 529 LLVKTRRIEKPPGYSSFELKGKIYLFYVGD-KSHPQHIEIYSYLEKLLERMQEAGYVPNT 587
Query: 514 SFVLHDVDEEEKVHSLRYHSEKLAVAYGLVK-LPEGVPIRVMKNLRVCGDCHSAIKLISK 572
VLHD+DEEEK +LR HSEKLAVA+ L+ +P V I ++KNLRVC DCH+A+K I+K
Sbjct: 588 GSVLHDLDEEEKESALRIHSEKLAVAFALMNSVPRSV-IHIIKNLRVCSDCHTAMKFITK 646
Query: 573 VMGREIILRDANRFHHFKDGLCSCRDYW 600
+ REII+RD RFHHFKDGLCSCRDYW
Sbjct: 647 ITEREIIIRDLQRFHHFKDGLCSCRDYW 674
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 94/196 (47%), Gaps = 33/196 (16%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDM 62
ER+VVSW +M+ Y + GM EA L+ +M + +GG I+
Sbjct: 262 ERDVVSWNSMIALYAQNGMSAEAIGLYSKM---------LNVGGGIK------------- 299
Query: 63 MPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPK----KNVISWTTMISGYVNNNRIDVA 118
+ VA + ++L G + G+ I +++ + +NV T+++ Y R+++A
Sbjct: 300 ---CNAVALSAVLLACAHAGAIQTGKRIHNQVVRMGLEENVYVGTSIVDMYSKCGRVEMA 356
Query: 119 RKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSV----VASNSMILGLGQN 174
+ F + EKN +SW+AM+ GY GR Q+A E+F M + + S++
Sbjct: 357 SRAFRKIKEKNILSWSAMITGYGMHGRGQEALEIFTEMKRSGLRPNYITFISVLAACSHA 416
Query: 175 GEVQKARVVFDQMREK 190
G + + R ++ M+++
Sbjct: 417 GLLDEGRYWYNAMKQE 432
>gi|357119334|ref|XP_003561397.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g62890-like [Brachypodium distachyon]
Length = 635
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 210/524 (40%), Positives = 320/524 (61%), Gaps = 15/524 (2%)
Query: 90 IFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMG---------- 139
+F +P++N+ S+T +++ N+ R + + ++ A G
Sbjct: 114 LFPNLPRRNLHSFTFLLASISNHLDATDHRASSFLGSHVHALAVKAGAAGDLYVRNALTH 173
Query: 140 -YTQCGRIQDAWELFKAMP-MKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSG 197
Y CG + +F +P ++ VV N+++ G + G V+ AR VF++M +D+ +WS
Sbjct: 174 FYGVCGDVGAMRTVFDELPRVRDVVTWNAVLAGYVRAGMVRAAREVFEEMPVRDEVSWST 233
Query: 198 MIKVYERKGYELEV-IDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRC 256
++ Y ++G EL+V + +F M ++GVRVN ++++ LS A + L+HGR VH + R
Sbjct: 234 LVGGYVKEG-ELDVALGVFRDMVEKGVRVNEAAVVTALSAAAQMGLLEHGRFVHEVVQRT 292
Query: 257 QFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVF 316
V V V + L+ M+ KCG + + +FD +D+ WN++I G A +GLG+ ++++F
Sbjct: 293 GMPVSVNVGAALVDMFSKCGCVAVAREVFDGMPRRDVFAWNAMICGLASHGLGQDAVELF 352
Query: 317 HEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGR 376
G+ P D+T VGVL+ACS G V EGR F+ M KY +EP+ EHY CMVDLLGR
Sbjct: 353 WRFLDEGLWPTDITFVGVLNACSRCGLVAEGRRYFKLMVDKYRIEPEMEHYGCMVDLLGR 412
Query: 377 AGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILL 436
AG V +A++LIE M PD ++WG++L AC+TH +DL KL++LEP + G Y+LL
Sbjct: 413 AGLVSEAIELIEGMHIAPDPVLWGTVLSACKTHNLVDLGITVGNKLIELEPAHDGHYVLL 472
Query: 437 SNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRM 496
++IYA ++ +V E+RK M R K G S +E + +H F D + H + I M
Sbjct: 473 ASIYAKAKKWDEVREVRKLMSSRGTGKSAGWSLMEAQGNLHKFLVGD-MDHKDSVQIYNM 531
Query: 497 LEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKN 556
L+ I L +AGY PD S VLHD+ +EEKVH+++ HSE+LA+AYG + G PIR++KN
Sbjct: 532 LDMINRRLADAGYVPDVSSVLHDIGDEEKVHAIKVHSERLAIAYGFIVTEVGSPIRIVKN 591
Query: 557 LRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
L+VCGDCH K+++KV REII+RD +RFHH K+G CSC DYW
Sbjct: 592 LQVCGDCHEFSKMVTKVFNREIIVRDGSRFHHMKEGKCSCLDYW 635
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 141/291 (48%), Gaps = 25/291 (8%)
Query: 4 RNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMM 63
R+VV+W A++ GYV GM+ A +F +MP ++ VSW+ ++GG++++ +D A +F M
Sbjct: 195 RDVVTWNAVLAGYVRAGMVRAAREVFEEMPVRDEVSWSTLVGGYVKEGELDVALGVFRDM 254
Query: 64 PEKDV----VAQTNMVLGYCQDGRVDEGREIFDEMPKK----NVISWTTMISGYVNNNRI 115
EK V A + Q G ++ GR + + + + +V ++ + +
Sbjct: 255 VEKGVRVNEAAVVTALSAAAQMGLLEHGRFVHEVVQRTGMPVSVNVGAALVDMFSKCGCV 314
Query: 116 DVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGL---- 171
VAR++F+ MP ++ +W AM+ G G QDA ELF + + ++ +G+
Sbjct: 315 AVAREVFDGMPRRDVFAWNAMICGLASHGLGQDAVELFWRFLDEGLWPTDITFVGVLNAC 374
Query: 172 GQNGEVQKARVVFDQMREK-----DDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVN 226
+ G V + R F M +K + + M+ + R G E I+L EG+ +
Sbjct: 375 SRCGLVAEGRRYFKLMVDKYRIEPEMEHYGCMVDLLGRAGLVSEAIELI-----EGMHIA 429
Query: 227 FPSLI--SVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKC 275
++ +VLS C + +D G V +L+ + D + +L ++Y K
Sbjct: 430 PDPVLWGTVLSACKTHNLVDLGITVGNKLIELEPAHDGHYV-LLASIYAKA 479
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 98/216 (45%), Gaps = 17/216 (7%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV----VSWTVMLGGFIRDSRIDDA 56
MP R+ VSW+ +V GYV+EG + A +F M EK V + L + ++
Sbjct: 223 MPVRDEVSWSTLVGGYVKEGELDVALGVFRDMVEKGVRVNEAAVVTALSAAAQMGLLEHG 282
Query: 57 RRLFDMMPEKDVVAQTN----MVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
R + +++ + N +V + + G V RE+FD MP+++V +W MI G ++
Sbjct: 283 RFVHEVVQRTGMPVSVNVGAALVDMFSKCGCVAVAREVFDGMPRRDVFAWNAMICGLASH 342
Query: 113 NRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVAS---- 164
A +LF ++ ++++ +L ++CG + + FK M K +
Sbjct: 343 GLGQDAVELFWRFLDEGLWPTDITFVGVLNACSRCGLVAEGRRYFKLMVDKYRIEPEMEH 402
Query: 165 -NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMI 199
M+ LG+ G V +A + + M D G +
Sbjct: 403 YGCMVDLLGRAGLVSEAIELIEGMHIAPDPVLWGTV 438
>gi|224141409|ref|XP_002324065.1| predicted protein [Populus trichocarpa]
gi|222867067|gb|EEF04198.1| predicted protein [Populus trichocarpa]
Length = 707
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 215/647 (33%), Positives = 358/647 (55%), Gaps = 51/647 (7%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDS-RIDDARRLFD 61
E +++ +++ Y + ++ A LF +MPE+NVVSW+ ++ G++ + + R L D
Sbjct: 63 ENSIIEVNSLINFYAKVNQVSIAHNLFDRMPERNVVSWSALMTGYLLNGFSLKVIRLLKD 122
Query: 62 MMPEKDVVAQTNM----VLGYCQDGRVDEGRE---------------------------- 89
M+ E +V + + C GRV+EGR+
Sbjct: 123 MISEGNVSPNEYILAIAISSCCDRGRVEEGRQCHGLLLKTGFSFHNYVRNALVSMYSKCS 182
Query: 90 -------IFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSW--TAMLMGY 140
+++E+P +++++ +++S V N + ++ M ++ V W + +
Sbjct: 183 IVQDAMGVWNEVPVNDIVAYNSILSSLVENGYLREGLEVLRSMVSES-VKWDKVTFVNAF 241
Query: 141 TQCGRIQD---AWELFKAMPMKSV----VASNSMILGLGQNGEVQKARVVFDQMREKDDA 193
+ C ++D + M V S+++I G+ G+ AR VFD ++ ++
Sbjct: 242 SLCASLKDLRLGLHVHGKMLTSDVECDAYVSSAIINMYGKCGKSLMARGVFDGLQSRNVV 301
Query: 194 TWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQL 253
W+ ++ + G E ++LF+ M++E V+ N + +L+ CA L++ +G +H
Sbjct: 302 LWTAVMASCFQNGCFEEALNLFSKMEQENVKSNEFTYAVLLNACAGLSARRNGSLLHGHS 361
Query: 254 VRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSL 313
+ F V V + LI MY K G++ K +F + +DI+ WN++I G++ +GLG+K+L
Sbjct: 362 EKSGFKHHVMVGNALINMYAKSGDIEAAKKVFSDMMHRDIITWNAMICGFSHHGLGKKAL 421
Query: 314 KVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDL 373
VF +M ++ P+ VT GVLSAC + G V+EG + ++ V+P EHY C+V L
Sbjct: 422 LVFQDMLAAEEHPNYVTFTGVLSACGHLGLVQEGFYYLHHLMKQFGVQPGLEHYTCIVSL 481
Query: 374 LGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPY 433
L + GQ+ +A + P + D + W +LL AC H L A+ +L+++P + G Y
Sbjct: 482 LSKTGQLNEARNFMRTAPVKWDVVAWRTLLNACHVHQNYGLGRWVAEFVLEMDPNDVGTY 541
Query: 434 ILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMI 493
LLSNIYA + R+ V ++RK MR + + K PG SWIE+ H+FT D HP++
Sbjct: 542 TLLSNIYAKEKRWDGVVKVRKLMRDKKIKKEPGVSWIEIGNVTHIFTSEDN-KHPDYGQT 600
Query: 494 MRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRV 553
+ ++++ +++ GY PD VLHDV++E+K + L YHSEKLA+AYGL+KLP I V
Sbjct: 601 YQKVKELLAMIKPLGYTPDIGAVLHDVEDEQKEYYLSYHSEKLAIAYGLLKLPSEASILV 660
Query: 554 MKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
+KNLR+C DCHSA++LISKV R I++RDANRFHHF+DG CSC DYW
Sbjct: 661 IKNLRICDDCHSAVRLISKVTNRVIVVRDANRFHHFRDGRCSCLDYW 707
>gi|255545098|ref|XP_002513610.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547518|gb|EEF49013.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 660
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 229/605 (37%), Positives = 345/605 (57%), Gaps = 20/605 (3%)
Query: 12 MVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQ 71
++R Y G A +F ++ +KNVV + VM+ ++ + DA ++ M + V
Sbjct: 60 LMRVYAACGEPGLARHIFDEITDKNVVFFNVMIRSYVNNHLYKDALLVYKTMYTQGFVP- 118
Query: 72 TNMVLGYC---QDGRVDE---GREIFDEMPK----KNVISWTTMISGYVNNNRIDVARKL 121
+M C R D G +I + K N+ +I+ Y + A+++
Sbjct: 119 -DMYTYPCVLKASSRSDSLWVGLQIHGAVLKIGLDLNLYVGNGLIAMYGKCKSLKEAQQV 177
Query: 122 FEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAM------PMKSVVASNSMILGLGQNG 175
+ +P ++ VSW +M+ Y Q GR DA EL + M P +AS + +
Sbjct: 178 LDEIPCRDVVSWNSMVSVYAQNGRFNDALELCREMEALNLKPNDCTMASLLPAVTNTTSD 237
Query: 176 EVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLS 235
V + +F ++ +K +W+ MI +Y E + L++ M+ GV + S++SVL
Sbjct: 238 NVLYVKEMFLKLTKKSVISWNVMIAMYVNNSMPKEAVVLYSQMEANGVEPDVVSIVSVLP 297
Query: 236 VCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVM 295
L++L GR+VH R + ++ + + LI MY KCG L + +F+ +D+V
Sbjct: 298 AYGDLSALSLGRRVHKFAERKKLLPNLLLENALIDMYAKCGCLRDARAVFNQMQFRDVVS 357
Query: 296 WNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMK 355
W SIIS Y + G G ++ VF EM +SG+ PD + V VL+ACS+ G + +GR F M
Sbjct: 358 WTSIISAYGKCGQGRDAVAVFAEMRNSGLNPDSIAFVSVLAACSHAGLLDDGRYYFNLM- 416
Query: 356 SKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLA 415
++ + PK EH+AC+VDLLGRAG++++A I MP EPD +WG LL ACR + +++
Sbjct: 417 AECGITPKLEHFACVVDLLGRAGKIDEAYGFIRQMPLEPDERVWGPLLSACRVYSNMNIG 476
Query: 416 EVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKK 475
+AA KLL L P+++G Y+LLSNIYA GR+ DVA +R M ++ + K PG S +E+
Sbjct: 477 ILAADKLLMLNPEHSGYYVLLSNIYAKAGRWADVAAIRSIMERKGIKKLPGISNVELNDG 536
Query: 476 VHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEK 535
VH F D SHP+ I L+ + G ++E GY P++ LHDV+EE+K + L HSEK
Sbjct: 537 VHTFLAGD-HSHPQSKKIYEELDVLVGKMKELGYMPETDSALHDVEEEDKEYHLAVHSEK 595
Query: 536 LAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCS 595
LAVA+ ++ G PIRV KNLRVCGDCH A KLISK+ REII+RD +RFHHF++G CS
Sbjct: 596 LAVAFAIINTKPGTPIRVTKNLRVCGDCHVAAKLISKIAEREIIIRDTHRFHHFQEGCCS 655
Query: 596 CRDYW 600
C DYW
Sbjct: 656 CGDYW 660
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 100/238 (42%), Gaps = 49/238 (20%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTL-------------------------------- 28
+P R+VVSW +MV Y + G +A L
Sbjct: 181 IPCRDVVSWNSMVSVYAQNGRFNDALELCREMEALNLKPNDCTMASLLPAVTNTTSDNVL 240
Query: 29 -----FWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMP----EKDVVAQTNMVLGYC 79
F ++ +K+V+SW VM+ ++ +S +A L+ M E DVV+ +++ Y
Sbjct: 241 YVKEMFLKLTKKSVISWNVMIAMYVNNSMPKEAVVLYSQMEANGVEPDVVSIVSVLPAYG 300
Query: 80 QDGRVDEGREI--FDEMPK--KNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTA 135
+ GR + F E K N++ +I Y + AR +F M ++ VSWT+
Sbjct: 301 DLSALSLGRRVHKFAERKKLLPNLLLENALIDMYAKCGCLRDARAVFNQMQFRDVVSWTS 360
Query: 136 MLMGYTQCGRIQDAWELFKAMPMKSV----VASNSMILGLGQNGEVQKARVVFDQMRE 189
++ Y +CG+ +DA +F M + +A S++ G + R F+ M E
Sbjct: 361 IISAYGKCGQGRDAVAVFAEMRNSGLNPDSIAFVSVLAACSHAGLLDDGRYYFNLMAE 418
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 107/241 (44%), Gaps = 20/241 (8%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMP----EKNVVSWTVMLGGFIRDSRIDDA 56
+ +++V+SW M+ YV M EA L+ QM E +VVS +L + S +
Sbjct: 249 LTKKSVISWNVMIAMYVNNSMPKEAVVLYSQMEANGVEPDVVSIVSVLPAYGDLSALSLG 308
Query: 57 RRLFDMMPEK----DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
RR+ K +++ + ++ Y + G + + R +F++M ++V+SWT++IS Y
Sbjct: 309 RRVHKFAERKKLLPNLLLENALIDMYAKCGCLRDARAVFNQMQFRDVVSWTSIISAYGKC 368
Query: 113 NRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVAS---- 164
+ A +F M + +++ ++L + G + D F M +
Sbjct: 369 GQGRDAVAVFAEMRNSGLNPDSIAFVSVLAACSHAGLLDDGRYYFNLMAECGITPKLEHF 428
Query: 165 NSMILGLGQNGEVQKARVVFDQMR-EKDDATWSGMI---KVYERKGYELEVIDLFTLMQK 220
++ LG+ G++ +A QM E D+ W ++ +VY + D ++
Sbjct: 429 ACVVDLLGRAGKIDEAYGFIRQMPLEPDERVWGPLLSACRVYSNMNIGILAADKLLMLNP 488
Query: 221 E 221
E
Sbjct: 489 E 489
>gi|334185836|ref|NP_001190038.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
gi|218546754|sp|P0C899.1|PP271_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g49142
gi|332644983|gb|AEE78504.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
Length = 686
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 221/608 (36%), Positives = 344/608 (56%), Gaps = 20/608 (3%)
Query: 12 MVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQ 71
++R Y + A +F ++PE+NV+ VM+ ++ + + ++F M +V
Sbjct: 80 LMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPD 139
Query: 72 TNM---VLGYCQ-DGRVDEGREIFDEMPKKNVISW----TTMISGYVNNNRIDVARKLFE 123
VL C G + GR+I K + S ++S Y + AR + +
Sbjct: 140 HYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLD 199
Query: 124 VMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSV---VASNSMILGLGQNGEVQKA 180
M ++ VSW ++++GY Q R DA E+ + M + + + +L N +
Sbjct: 200 EMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENV 259
Query: 181 RVV---FDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVC 237
V F +M +K +W+ MI VY + +E ++L++ M+ +G + S+ SVL C
Sbjct: 260 MYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPAC 319
Query: 238 ASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWN 297
++L G+++H + R + ++ + + LI MY KCG L K + +F+N S+D+V W
Sbjct: 320 GDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWT 379
Query: 298 SIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSK 357
++IS Y G G ++ +F ++ SG++PD + V L+ACS+ G ++EGR F+ M
Sbjct: 380 AMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDH 439
Query: 358 YLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEV 417
Y + P+ EH ACMVDLLGRAG+V++A + I+ M EP+ +WG+LLGACR H D+ +
Sbjct: 440 YKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLL 499
Query: 418 AAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVH 477
AA KL QL P+ +G Y+LLSNIYA GR+ +V +R M+ + + K PG S +EV + +H
Sbjct: 500 AADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIH 559
Query: 478 MFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLA 537
F D SHP+ I R L+ + ++E GY PDS LHDV+EE+K L HSEKLA
Sbjct: 560 TFLVGD-RSHPQSDEIYRELDVLVKKMKELGYVPDSESALHDVEEEDKETHLAVHSEKLA 618
Query: 538 VAYGLVKLPE-----GVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDG 592
+ + L+ E IR+ KNLR+CGDCH A KLIS++ REII+RD NRFH F+ G
Sbjct: 619 IVFALMNTKEEEEDSNNTIRITKNLRICGDCHVAAKLISQITSREIIIRDTNRFHVFRFG 678
Query: 593 LCSCRDYW 600
+CSC DYW
Sbjct: 679 VCSCGDYW 686
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 77/169 (45%), Gaps = 2/169 (1%)
Query: 247 RQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQY 306
R VH++++ + + L+ Y ++ + +FD +++++ N +I Y
Sbjct: 59 RTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNN 118
Query: 307 GLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEH 366
G + +KVF M V PD T VL ACS +G + GR+I S +K +
Sbjct: 119 GFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGS-ATKVGLSSTLFV 177
Query: 367 YACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLA 415
+V + G+ G + +A +++ M D + W SL+ + + D A
Sbjct: 178 GNGLVSMYGKCGFLSEARLVLDEMS-RRDVVSWNSLVVGYAQNQRFDDA 225
Score = 45.8 bits (107), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 44/230 (19%), Positives = 94/230 (40%), Gaps = 34/230 (14%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMP 64
N++ A++ Y + G + +A +F M ++VVSWT M+ + R DA LF +
Sbjct: 343 NLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQ 402
Query: 65 EK----DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARK 120
+ D +A + G ++EGR F M
Sbjct: 403 DSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDH----------------------- 439
Query: 121 LFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQ-NGEVQK 179
+++ P ++ L+G + G++++A+ + M M+ +LG + + +
Sbjct: 440 -YKITPRLEHLACMVDLLG--RAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDI 496
Query: 180 ARVVFD---QMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVN 226
+ D Q+ + + + +Y + G EV ++ +M+ +G++ N
Sbjct: 497 GLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKN 546
Score = 42.4 bits (98), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 78/178 (43%), Gaps = 21/178 (11%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVV----SWTVMLGGFIRDSRIDDA 56
M R+VVSWTAM+ Y G +A LF ++ + +V ++ L +++
Sbjct: 370 MKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEG 429
Query: 57 RRLFDMM-------PEKDVVAQTNMVLGYCQDGRVDEGREIFDEMP-KKNVISWTTMISG 108
R F +M P + +A +LG + G+V E +M + N W ++
Sbjct: 430 RSCFKLMTDHYKITPRLEHLACMVDLLG--RAGKVKEAYRFIQDMSMEPNERVWGALLGA 487
Query: 109 YVNNNRIDV----ARKLFEVMPEKNEVSWTAMLMG-YTQCGRIQDAWELFKAMPMKSV 161
++ D+ A KLF++ PE++ + +L Y + GR ++ + M K +
Sbjct: 488 CRVHSDTDIGLLAADKLFQLAPEQS--GYYVLLSNIYAKAGRWEEVTNIRNIMKSKGL 543
>gi|359490555|ref|XP_003634110.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Vitis vinifera]
Length = 678
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 221/589 (37%), Positives = 318/589 (53%), Gaps = 77/589 (13%)
Query: 88 REIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVM------PEK------------N 129
R IFDE+PKKNV+ + MI YVNN+ A +F+ M P+ +
Sbjct: 91 RHIFDEIPKKNVVFFNVMIRSYVNNHLYSDALLVFKNMAGHGIDPDHYTYPCVLKASSGS 150
Query: 130 EVSWTAMLMG---------------------YTQCGRIQDAWELFKAMPMKSVVASNSMI 168
E W M + Y +CG + +A + MP + VV+ NS++
Sbjct: 151 EDLWVGMQIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVLDQMPCRDVVSWNSLV 210
Query: 169 LGLGQNGEVQKA-------------------------------------RVVFDQMREKD 191
G +NG+ A + +F ++ K
Sbjct: 211 AGCARNGQFDDALEVCKEMELLGLKPDAGTMASLLPAVTNTCLDNVSFVKEMFMKLANKS 270
Query: 192 DATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHA 251
+W+ MI VY E +D+F M+ V + S+ SVL C L++L GR++H
Sbjct: 271 LVSWNVMIAVYMNNSMPAEAVDIFLQMEDHAVDPDAISIASVLPACGDLSALLLGRRIHE 330
Query: 252 QLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEK 311
+VR + ++ + + LI MY KCG L + +FD +D+V W S+IS Y G G
Sbjct: 331 YVVRKRLQPNLLLENALIDMYAKCGCLEYAREVFDQMKFRDVVSWTSMISAYGMNGKGRD 390
Query: 312 SLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMV 371
++ +F M G+ PD + V VLSACS+ G + EGR F+ M + + P+ EH+ CMV
Sbjct: 391 AVSLFSRMQDLGLNPDSIAFVSVLSACSHAGLLDEGRYYFKLMTEECKIVPRIEHFVCMV 450
Query: 372 DLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAG 431
DLLGRAGQV++A I+ MP EP+ +WG+LL ACR + + + +AA +L QL P+ +G
Sbjct: 451 DLLGRAGQVDEAYGFIKQMPMEPNERVWGALLSACRVYSNMIIGLLAADQLFQLCPEQSG 510
Query: 432 PYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHP 491
Y+LLSNIYA GR+ DV +R M+ + + K PG S E++ +VH F D SHP+
Sbjct: 511 YYVLLSNIYAKAGRWEDVTTVRSIMKTKGIKKMPGVSNFELDNRVHTFLAGD-QSHPQSK 569
Query: 492 MIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPI 551
I L+ G ++EAGY P++ LHDV+EE+K L HSEKLA+A+ ++ G PI
Sbjct: 570 QIYEELDVSVGKMKEAGYVPETDSALHDVEEEDKECHLAVHSEKLAIAFAILNTAPGSPI 629
Query: 552 RVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
R+ KNLRVCGDCH A KLISK++GREI +RD NRFHHF +G+CSC DYW
Sbjct: 630 RITKNLRVCGDCHIAAKLISKIVGREITIRDTNRFHHFYNGVCSCGDYW 678
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 95/323 (29%), Positives = 150/323 (46%), Gaps = 25/323 (7%)
Query: 175 GEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVL 234
GE R +FD++ +K+ ++ MI+ Y + + +F M G+ + + VL
Sbjct: 85 GEPWSTRHIFDEIPKKNVVFFNVMIRSYVNNHLYSDALLVFKNMAGHGIDPDHYTYPCVL 144
Query: 235 SVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIV 294
+ L G Q+HA +VR D++V+V + LI+MY KCG LV+ + D +D+V
Sbjct: 145 KASSGSEDLWVGMQIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVLDQMPCRDVV 204
Query: 295 MWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYT--GKVKEGREIFE 352
WNS+++G A+ G + +L+V EM G+ PD T+ +L A + T V +E+F
Sbjct: 205 SWNSLVAGCARNGQFDDALEVCKEMELLGLKPDAGTMASLLPAVTNTCLDNVSFVKEMFM 264
Query: 353 SMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKL 412
+ +K LV M + + + D +E +PDAI S+L AC L
Sbjct: 265 KLANKSLVSWNVMIAVYMNNSM--PAEAVDIFLQMEDHAVDPDAISIASVLPACGDLSAL 322
Query: 413 DLA----EVAAKKLLQLEPKNAGPYILLSN----IYASQGRFHDVAELRKNMRKRNVIKP 464
L E +K LQ P +LL N +YA G E+ M+ R+V+
Sbjct: 323 LLGRRIHEYVVRKRLQ-------PNLLLENALIDMYAKCGCLEYAREVFDQMKFRDVV-- 373
Query: 465 PGCSWIEVEKKVHMF-TGRDCVS 486
SW + M GRD VS
Sbjct: 374 ---SWTSMISAYGMNGKGRDAVS 393
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 128/266 (48%), Gaps = 32/266 (12%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDA------RR 58
NV ++ Y + G + EA + QMP ++VVSW ++ G R+ + DDA
Sbjct: 171 NVFVGNGLISMYGKCGCLVEACRVLDQMPCRDVVSWNSLVAGCARNGQFDDALEVCKEME 230
Query: 59 LFDMMPEKDVVAQ-TNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDV 117
L + P+ +A V C D V +E+F ++ K+++SW MI+ Y+NN+
Sbjct: 231 LLGLKPDAGTMASLLPAVTNTCLD-NVSFVKEMFMKLANKSLVSWNVMIAVYMNNSMPAE 289
Query: 118 ARKLF----------------EVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSV 161
A +F V+P ++S A+L+G RI + + P ++
Sbjct: 290 AVDIFLQMEDHAVDPDAISIASVLPACGDLS--ALLLGR----RIHEYVVRKRLQP--NL 341
Query: 162 VASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKE 221
+ N++I + G ++ AR VFDQM+ +D +W+ MI Y G + + LF+ MQ
Sbjct: 342 LLENALIDMYAKCGCLEYAREVFDQMKFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQDL 401
Query: 222 GVRVNFPSLISVLSVCASLASLDHGR 247
G+ + + +SVLS C+ LD GR
Sbjct: 402 GLNPDSIAFVSVLSACSHAGLLDEGR 427
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 103/217 (47%), Gaps = 18/217 (8%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV----VSWTVMLGGFIRDSRIDDA 56
+ +++VSW M+ Y+ M EA +F QM + V +S +L S +
Sbjct: 266 LANKSLVSWNVMIAVYMNNSMPAEAVDIFLQMEDHAVDPDAISIASVLPACGDLSALLLG 325
Query: 57 RRLFDMMPEK----DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
RR+ + + K +++ + ++ Y + G ++ RE+FD+M ++V+SWT+MIS Y N
Sbjct: 326 RRIHEYVVRKRLQPNLLLENALIDMYAKCGCLEYAREVFDQMKFRDVVSWTSMISAYGMN 385
Query: 113 NRIDVARKLFEVMPE----KNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASN--- 165
+ A LF M + + +++ ++L + G + + FK M + +
Sbjct: 386 GKGRDAVSLFSRMQDLGLNPDSIAFVSVLSACSHAGLLDEGRYYFKLMTEECKIVPRIEH 445
Query: 166 --SMILGLGQNGEVQKARVVFDQM-REKDDATWSGMI 199
M+ LG+ G+V +A QM E ++ W ++
Sbjct: 446 FVCMVDLLGRAGQVDEAYGFIKQMPMEPNERVWGALL 482
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 77/162 (47%), Gaps = 4/162 (2%)
Query: 268 LITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPD 327
L+ Y CGE + IFD K++V +N +I Y L +L VF M G+ PD
Sbjct: 77 LMRAYAVCGEPWSTRHIFDEIPKKNVVFFNVMIRSYVNNHLYSDALLVFKNMAGHGIDPD 136
Query: 328 DVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLI 387
T VL A S + + G +I ++ + ++ ++ + G+ G + +A +++
Sbjct: 137 HYTYPCVLKASSGSEDLWVGMQIHAAV-VRVGLDLNVFVGNGLISMYGKCGCLVEACRVL 195
Query: 388 EAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAK--KLLQLEP 427
+ MP D + W SL+ C + + D A K +LL L+P
Sbjct: 196 DQMPCR-DVVSWNSLVAGCARNGQFDDALEVCKEMELLGLKP 236
>gi|240255401|ref|NP_189042.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332643322|gb|AEE76843.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 665
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 210/581 (36%), Positives = 336/581 (57%), Gaps = 48/581 (8%)
Query: 51 SRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYV 110
S I RR ++ + +K V + + GR+ I + + +++ T+++ Y
Sbjct: 54 SYIPADRRFYNTLLKKCTVFKLLI------QGRIVHA-HILQSIFRHDIVMGNTLLNMYA 106
Query: 111 NNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAM----------PMKS 160
++ ARK+FE MP+++ V+WT ++ GY+Q R DA F M + S
Sbjct: 107 KCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSS 166
Query: 161 VVAS----------------------------NSMILGL-GQNGEVQKARVVFDQMREKD 191
V+ + S +L L + G + A++VFD + ++
Sbjct: 167 VIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRN 226
Query: 192 DATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHA 251
D +W+ +I + R+ + ++LF M ++G R + S S+ C+S L+ G+ VHA
Sbjct: 227 DVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHA 286
Query: 252 QLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEK 311
+++ + + + L+ MY K G + + IFD A +D+V WNS+++ YAQ+G G++
Sbjct: 287 YMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKE 346
Query: 312 SLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMV 371
++ F EM G+ P++++ + VL+ACS++G + EG +E MK +V P+ HY +V
Sbjct: 347 AVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIV-PEAWHYVTVV 405
Query: 372 DLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAG 431
DLLGRAG + A++ IE MP EP A IW +LL ACR H +L AA+ + +L+P + G
Sbjct: 406 DLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPG 465
Query: 432 PYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHP 491
P+++L NIYAS GR++D A +RK M++ V K P CSW+E+E +HMF D HP+
Sbjct: 466 PHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVAND-ERHPQRE 524
Query: 492 MIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPI 551
I R E++ ++E GY PD+S V+ VD++E+ +L+YHSEK+A+A+ L+ P G I
Sbjct: 525 EIARKWEEVLAKIKELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTI 584
Query: 552 RVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDG 592
+ KN+RVCGDCH+AIKL SKV+GREII+RD NRFHHFKD
Sbjct: 585 HIKKNIRVCGDCHTAIKLASKVVGREIIVRDTNRFHHFKDA 625
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 134/289 (46%), Gaps = 47/289 (16%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMM- 63
++V ++ Y + G + EA +F +MP+++ V+WT ++ G+ + R DA F+ M
Sbjct: 94 DIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQML 153
Query: 64 -----PEKDVVAQ---------------------------TNMVLG------YCQDGRVD 85
P + ++ +N+ +G Y + G +D
Sbjct: 154 RFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMD 213
Query: 86 EGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEK----NEVSWTAMLMGYT 141
+ + +FD + +N +SW +I+G+ + + A +LF+ M + S+ ++ +
Sbjct: 214 DAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACS 273
Query: 142 QCGRI-QDAW---ELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSG 197
G + Q W + K+ A N+++ ++G + AR +FD++ ++D +W+
Sbjct: 274 STGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNS 333
Query: 198 MIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHG 246
++ Y + G+ E + F M++ G+R N S +SVL+ C+ LD G
Sbjct: 334 LLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEG 382
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 96/218 (44%), Gaps = 17/218 (7%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV----VSWTVMLGGFIRDSRIDDA 56
+ RN VSW A++ G+ +A LF M S+ + G ++
Sbjct: 222 LESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQG 281
Query: 57 RRLFDMM---PEKDVVAQTNMVLG-YCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+ + M EK V N +L Y + G + + R+IFD + K++V+SW ++++ Y +
Sbjct: 282 KWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQH 341
Query: 113 NRIDVARKLFEVMP----EKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASN--- 165
A FE M NE+S+ ++L + G + + W ++ M +V
Sbjct: 342 GFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHY 401
Query: 166 -SMILGLGQNGEVQKARVVFDQMR-EKDDATWSGMIKV 201
+++ LG+ G++ +A ++M E A W ++
Sbjct: 402 VTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNA 439
>gi|147770672|emb|CAN62482.1| hypothetical protein VITISV_010810 [Vitis vinifera]
Length = 704
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 209/576 (36%), Positives = 341/576 (59%), Gaps = 18/576 (3%)
Query: 39 SWTVMLGGFIRDSRIDDARRLFDMMP----EKDVVAQTNMVLGYCQDGRVDEGREIFDEM 94
++ ++ I I +++F+ M + D + ++L + + G + + R +FDEM
Sbjct: 133 TYDALVSACIGLKSIRGVKKVFNYMINSGLDPDEYLRNRVLLMHVKCGMMIDARRLFDEM 192
Query: 95 PKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAML---------MGYTQCGR 145
P+KN++SW T+I G V+ A +LF +M + + + M +G GR
Sbjct: 193 PEKNILSWNTIIGGLVDAGDYFEAFRLFLMMWQXFSDAGSRMFVTMIRASAGLGLIFAGR 252
Query: 146 IQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERK 205
+ L K V + ++I + G ++ A+ VFDQM EK W+ +I Y
Sbjct: 253 QLHSCSL-KTGVGGDVFVACALIDMYSKCGSIEDAQCVFDQMPEKTTVGWNSIIAGYALH 311
Query: 206 GYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVA 265
GY E + ++ M+ GV+++ + ++ +CA LASL+H +Q HA LVR F +D+
Sbjct: 312 GYSEEALSMYYEMRDSGVKIDNFTFSIIIRICARLASLEHAKQAHAGLVRHGFGLDIVAN 371
Query: 266 SVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVM 325
+ L+ +Y K G + K +FD K+++ WN++I+GY +G G +++++F M G++
Sbjct: 372 TALVDLYSKWGRIEDAKHVFDMMPHKNVISWNALIAGYGNHGRGVEAVEMFERMLHEGMV 431
Query: 326 PDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMK 385
P+ VT + VLSACSY+G G EIFESM + ++P+ HYACM++LLGR G +++A
Sbjct: 432 PNHVTFLAVLSACSYSGLSDRGWEIFESMSRDHKIKPRAMHYACMIELLGREGLLDEAFA 491
Query: 386 LIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGR 445
LI+ PF+P +W +LL ACR H +L + AA+KL + P+ Y++L NIY GR
Sbjct: 492 LIKDAPFKPTVNMWAALLTACRVHKNFELGKFAAEKLYGMGPEKLSNYVVLLNIYNXSGR 551
Query: 446 FHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMF-TGRDCVSHPEHPMIMRMLEKIGGLL 504
+ A + + +++R + P CSWIE++K+ + F +G C H + I + L+++ +
Sbjct: 552 LEEAAAVIQTLKRRGLRMLPACSWIEIKKQPYGFISGDKC--HAQSKEIYQKLDELMLEI 609
Query: 505 REAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCH 564
+ GY P F+L DVDE+E+ L YHSEKLA+A+GL+ + P++++++ R+CGDCH
Sbjct: 610 SKHGYVPQXKFLLPDVDEQEE-RVLLYHSEKLAIAFGLINTSDWTPLQIVQSHRICGDCH 668
Query: 565 SAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
SAIKLI+ V REI++RDA+RFHHFKDG CSC DYW
Sbjct: 669 SAIKLIALVTRREIVVRDASRFHHFKDGSCSCGDYW 704
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/397 (20%), Positives = 181/397 (45%), Gaps = 58/397 (14%)
Query: 16 YVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEK--------- 66
+V+ GM+ +A LF +MPEKN++SW ++GG + +A RLF MM +
Sbjct: 176 HVKCGMMIDARRLFDEMPEKNILSWNTIIGGLVDAGDYFEAFRLFLMMWQXFSDAGSRMF 235
Query: 67 ------------------------------DVVAQTNMVLGYCQDGRVDEGREIFDEMPK 96
DV ++ Y + G +++ + +FD+MP+
Sbjct: 236 VTMIRASAGLGLIFAGRQLHSCSLKTGVGGDVFVACALIDMYSKCGSIEDAQCVFDQMPE 295
Query: 97 KNVISWTTMISGYVNNNRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWEL 152
K + W ++I+GY + + A ++ M + + +++ ++ + ++ A +
Sbjct: 296 KTTVGWNSIIAGYALHGYSEEALSMYYEMRDSGVKIDNFTFSIIIRICARLASLEHAKQA 355
Query: 153 FKAMPMKS----VVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYE 208
+ +VA+ +++ + G ++ A+ VFD M K+ +W+ +I Y G
Sbjct: 356 HAGLVRHGFGLDIVANTALVDLYSKWGRIEDAKHVFDMMPHKNVISWNALIAGYGNHGRG 415
Query: 209 LEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVR-CQFDVDVYVASV 267
+E +++F M EG+ N + ++VLS C+ D G ++ + R + +
Sbjct: 416 VEAVEMFERMLHEGMVPNHVTFLAVLSACSYSGLSDRGWEIFESMSRDHKIKPRAMHYAC 475
Query: 268 LITMYIKCGELVKG-KLIFDNFASKDIVMWNSIISG---YAQYGLGEKSLKVFHEMFSSG 323
+I + + G L + LI D + MW ++++ + + LG+ + + + G
Sbjct: 476 MIELLGREGLLDEAFALIKDAPFKPTVNMWAALLTACRVHKNFELGKFAAEKLY-----G 530
Query: 324 VMPDDVT-LVGVLSACSYTGKVKEGREIFESMKSKYL 359
+ P+ ++ V +L+ + +G+++E + +++K + L
Sbjct: 531 MGPEKLSNYVVLLNIYNXSGRLEEAAAVIQTLKRRGL 567
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 111/233 (47%), Gaps = 4/233 (1%)
Query: 178 QKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVR-VNFPSLISVLSV 236
++A+V Q+R+ + K+ K Y E ++LF +++ G ++ + +++S
Sbjct: 82 KEAQVNETQLRKPSSELCGQIEKLVFFKRYH-EALELFEILELNGAYDMDSETYDALVSA 140
Query: 237 CASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMW 296
C L S+ ++V ++ D D Y+ + ++ M++KCG ++ + +FD K+I+ W
Sbjct: 141 CIGLKSIRGVKKVFNYMINSGLDPDEYLRNRVLLMHVKCGMMIDARRLFDEMPEKNILSW 200
Query: 297 NSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKS 356
N+II G G ++ ++F M+ V ++ A + G + GR++ S
Sbjct: 201 NTIIGGLVDAGDYFEAFRLFLMMWQXFSDAGSRMFVTMIRASAGLGLIFAGRQL-HSCSL 259
Query: 357 KYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTH 409
K V ++D+ + G +EDA + + MP E + W S++ H
Sbjct: 260 KTGVGGDVFVACALIDMYSKCGSIEDAQCVFDQMP-EKTTVGWNSIIAGYALH 311
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/280 (21%), Positives = 122/280 (43%), Gaps = 58/280 (20%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEK------------------------- 35
MPE+ V W +++ GY G EA +++++M +
Sbjct: 293 MPEKTTVGWNSIIAGYALHGYSEEALSMYYEMRDSGVKIDNFTFSIIIRICARLASLEHA 352
Query: 36 --------------NVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQD 81
++V+ T ++ + + RI+DA+ +FDMMP K+V++ ++ GY
Sbjct: 353 KQAHAGLVRHGFGLDIVANTALVDLYSKWGRIEDAKHVFDMMPHKNVISWNALIAGYGNH 412
Query: 82 GRVDEGREIFDEMPKK----NVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAM- 136
GR E E+F+ M + N +++ ++S + D ++FE M +++ AM
Sbjct: 413 GRGVEAVEMFERMLHEGMVPNHVTFLAVLSACSYSGLSDRGWEIFESMSRDHKIKPRAMH 472
Query: 137 ------LMGYTQCGRIQDAWELFKAMPMKSVVASNSMILG---LGQNGEVQK--ARVVFD 185
L+G G + +A+ L K P K V + +L + +N E+ K A ++
Sbjct: 473 YACMIELLGRE--GLLDEAFALIKDAPFKPTVNMWAALLTACRVHKNFELGKFAAEKLYG 530
Query: 186 QMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRV 225
EK + + ++ +Y G E + +++ G+R+
Sbjct: 531 MGPEK-LSNYVVLLNIYNXSGRLEEAAAVIQTLKRRGLRM 569
>gi|297739586|emb|CBI29768.3| unnamed protein product [Vitis vinifera]
Length = 676
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 206/508 (40%), Positives = 312/508 (61%), Gaps = 12/508 (2%)
Query: 103 TTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSV- 161
++ Y I A ++F+ M ++ V WTAM+ Y Q R A LF+ M +
Sbjct: 171 AALVDMYAKCGEIGDAHEVFDRMLIRDVVCWTAMITLYEQAERPLKALMLFRKMQEEGFL 230
Query: 162 ---VASNSMILGLGQNGE----VQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDL 214
+ + S+ +GQ G+ + +AR+VFD+M E++ +W+ M+ Y + G + + L
Sbjct: 231 GDEITAISVASAVGQLGDGRMAISRARLVFDRMEERNGISWNSMLSGYTQNGRPTDALSL 290
Query: 215 FTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIK 274
F MQ N + + ++S C+ L S GR++H ++ + D+D + + ++ MY+K
Sbjct: 291 FNQMQASECDPNPVTALIMVSACSYLGSKHLGRKLHNFVISSKMDIDTTLRNAIMDMYMK 350
Query: 275 CGELVKGKLIFDN--FASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLV 332
CG+L +F+N +D+ WN +ISGY +G G+++L++F M GV P+D+T
Sbjct: 351 CGDLDTAVEMFNNCELGERDVSSWNVLISGYGVHGHGKEALELFSRMQVEGVEPNDITFT 410
Query: 333 GVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPF 392
+LSACS+ G + EGR+ F M +K V P+ +HYACMVD+LGRAG + +A +LI+ +P
Sbjct: 411 SILSACSHAGLIDEGRKCFADM-TKLSVRPEMKHYACMVDMLGRAGFLNEAFRLIKKIPS 469
Query: 393 EPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAEL 452
P +WG+LL ACR H +L E+AA L QLEP++ G Y+L+SNIYA+ ++ +V +
Sbjct: 470 RPSDEVWGALLLACRIHGNTELGEIAANNLFQLEPEHTGYYVLMSNIYAASNKWKEVEMV 529
Query: 453 RKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPD 512
R+NM+ R + KP S IE +VH F D S P + + R +E + ++ GY PD
Sbjct: 530 RQNMKSRGLKKPAAFSVIEFGTEVHGFHTAD-QSSPYYREVYRKVESLAIEMKMVGYVPD 588
Query: 513 SSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISK 572
S VLHDV+ E+K H L YHSEKLAVA+G++K+ +G+PI+V KNLRVC DCH A K IS
Sbjct: 589 LSCVLHDVEPEDKEHLLNYHSEKLAVAFGIMKMDQGMPIQVTKNLRVCSDCHWAFKFISS 648
Query: 573 VMGREIILRDANRFHHFKDGLCSCRDYW 600
+ GR+II+RD NRFHHF+ G CSC DYW
Sbjct: 649 IYGRKIIVRDGNRFHHFQGGRCSCGDYW 676
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 123/255 (48%), Gaps = 20/255 (7%)
Query: 167 MILGLGQNGEVQKARVVFDQ--------MREKDDATWSGMIKVYERKGYELEVIDLFTLM 218
+I+ + G++ AR +FD + + + M++ Y G E IDL+ M
Sbjct: 64 LIILYSKLGDLHSARTLFDHRHHHHHGHTQAPNSFLCNTMLRAYANAGRSYEAIDLYIYM 123
Query: 219 QKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGEL 278
Q+ GV VN + VL VCAS G VH Q+VR F D++V + L+ MY KCGE+
Sbjct: 124 QRMGVGVNNFTYPFVLKVCASELGAVFGEVVHGQVVRTGFGSDLFVEAALVDMYAKCGEI 183
Query: 279 VKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSAC 338
+FD +D+V W ++I+ Y Q K+L +F +M G + D++T + V SA
Sbjct: 184 GDAHEVFDRMLIRDVVCWTAMITLYEQAERPLKALMLFRKMQEEGFLGDEITAISVASAV 243
Query: 339 SYTG----KVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKL---IEAMP 391
G + R +F+ M+ + + + M+ + G+ DA+ L ++A
Sbjct: 244 GQLGDGRMAISRARLVFDRMEERNGIS-----WNSMLSGYTQNGRPTDALSLFNQMQASE 298
Query: 392 FEPDAIIWGSLLGAC 406
+P+ + ++ AC
Sbjct: 299 CDPNPVTALIMVSAC 313
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 94/374 (25%), Positives = 174/374 (46%), Gaps = 24/374 (6%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVV 69
A+V Y + G I +A +F +M ++VV WT M+ + + R A LF M E+ +
Sbjct: 171 AALVDMYAKCGEIGDAHEVFDRMLIRDVVCWTAMITLYEQAERPLKALMLFRKMQEEGFL 230
Query: 70 A------QTNMVLGYCQDGR--VDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKL 121
+G DGR + R +FD M ++N ISW +M+SGY N R A L
Sbjct: 231 GDEITAISVASAVGQLGDGRMAISRARLVFDRMEERNGISWNSMLSGYTQNGRPTDALSL 290
Query: 122 FEVM--PEKNEVSWTAMLM-------GYTQCGRIQDAWELFKAMPMKSVVASNSMILGLG 172
F M E + TA++M G GR + + M + + + + M + +
Sbjct: 291 FNQMQASECDPNPVTALIMVSACSYLGSKHLGRKLHNFVISSKMDIDTTLRNAIMDMYM- 349
Query: 173 QNGEVQKARVVFD--QMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSL 230
+ G++ A +F+ ++ E+D ++W+ +I Y G+ E ++LF+ MQ EGV N +
Sbjct: 350 KCGDLDTAVEMFNNCELGERDVSSWNVLISGYGVHGHGKEALELFSRMQVEGVEPNDITF 409
Query: 231 ISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFAS 290
S+LS C+ +D GR+ A + + ++ + ++ M + G L + + S
Sbjct: 410 TSILSACSHAGLIDEGRKCFADMTKLSVRPEMKHYACMVDMLGRAGFLNEAFRLIKKIPS 469
Query: 291 K-DIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSAC-SYTGKVKEGR 348
+ +W +++ +G E + +F + P+ ++S + + K KE
Sbjct: 470 RPSDEVWGALLLACRIHGNTELGEIAANNLFQ--LEPEHTGYYVLMSNIYAASNKWKEVE 527
Query: 349 EIFESMKSKYLVEP 362
+ ++MKS+ L +P
Sbjct: 528 MVRQNMKSRGLKKP 541
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 112/252 (44%), Gaps = 20/252 (7%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMP----EKNVVSWTVMLGGFIRDSRIDDA 56
M ERN +SW +M+ GY + G T+A +LF QM + N V+ +M+
Sbjct: 263 MEERNGISWNSMLSGYTQNGRPTDALSLFNQMQASECDPNPVTALIMVSACSYLGSKHLG 322
Query: 57 RRLFDMMPEK----DVVAQTNMVLGYCQDGRVDEGREIFD--EMPKKNVISWTTMISGYV 110
R+L + + D + ++ Y + G +D E+F+ E+ +++V SW +ISGY
Sbjct: 323 RKLHNFVISSKMDIDTTLRNAIMDMYMKCGDLDTAVEMFNNCELGERDVSSWNVLISGYG 382
Query: 111 NNNRIDVARKLFEVMP----EKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVAS-- 164
+ A +LF M E N++++T++L + G I + + F M SV
Sbjct: 383 VHGHGKEALELFSRMQVEGVEPNDITFTSILSACSHAGLIDEGRKCFADMTKLSVRPEMK 442
Query: 165 --NSMILGLGQNGEVQKA-RVVFDQMREKDDATWSGMIKVYERKG-YELEVIDLFTLMQK 220
M+ LG+ G + +A R++ D W ++ G EL I L Q
Sbjct: 443 HYACMVDMLGRAGFLNEAFRLIKKIPSRPSDEVWGALLLACRIHGNTELGEIAANNLFQL 502
Query: 221 EGVRVNFPSLIS 232
E + L+S
Sbjct: 503 EPEHTGYYVLMS 514
>gi|359489486|ref|XP_002269573.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Vitis vinifera]
Length = 786
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 236/717 (32%), Positives = 357/717 (49%), Gaps = 147/717 (20%)
Query: 2 PERNVVSWTAMVRGYVEEGMITEAGTLFWQMP----EKNVVSWTVML------------- 44
P R+ ++W++++ GY G EA LFW+M N +W +L
Sbjct: 99 PIRSCITWSSLISGYCRYGCDVEALELFWEMQYEGERPNQFTWGSVLRVCSMYVLLEKGK 158
Query: 45 -------------GGFIRDSRID---------DARRLFDMMPEK-DVVAQTNMVLGYCQD 81
F+ +D +A LF++ P+K + V T MV GY Q+
Sbjct: 159 QIHAHAIKTQFDSNAFVVTGLVDMYAKCKCILEAEYLFELAPDKRNHVLWTAMVTGYSQN 218
Query: 82 GRVDEGREIFDEMPKK---------------------------------------NVISW 102
G + E F +M + NV
Sbjct: 219 GDGHKAIECFRDMRGEGIECNQFTFPSILTACGSISACGFGAQVHGCIVRSGFGANVFVG 278
Query: 103 TTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFK-------- 154
+ ++ Y + AR++ E M + VSW +M++G + G ++A LF+
Sbjct: 279 SALVDMYSKCGDLSNARRMLETMEVDDPVSWNSMIVGCVRQGLGEEALSLFRIMHLRHMK 338
Query: 155 ---------------AMPMKSVVASNSMILGLG----------------QNGEVQKARVV 183
M M++ ++ +S+I+ G + G A V
Sbjct: 339 IDEFTYPSVLNCFSFVMDMRNAMSVHSLIVKTGFEAYKLVNNALVDMYAKRGYFDYAFDV 398
Query: 184 FDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASL 243
F++M +KD +W+ ++ G E + LF M+ G+ + + +VLS CA L L
Sbjct: 399 FEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIMGIHPDQIVIAAVLSACAELTVL 458
Query: 244 DHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGY 303
+ G+QVHA ++ + V + L++MY KCG + +FD+ +D++ W ++I GY
Sbjct: 459 EFGKQVHANFLKSGLGSSLSVDNSLVSMYAKCGCIEDANKVFDSMEIQDVITWTALIVGY 518
Query: 304 AQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPK 363
AQ G G + G V+ GR F+SM+ Y ++P
Sbjct: 519 AQNGRGR----------------------------DHAGLVEHGRSYFQSMEEVYGIKPG 550
Query: 364 TEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLL 423
EHYACM+DLLGR+G++ +A +L+ M +PDA +W +LL ACR H ++L E AA L
Sbjct: 551 PEHYACMIDLLGRSGKLMEAKELLNQMAVQPDATVWKALLAACRVHGNVELGERAANNLF 610
Query: 424 QLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRD 483
+LEPKNA PY+LLSN+Y++ G++ + A+ R+ M+ R V K PGCSWIE+ KVH F D
Sbjct: 611 ELEPKNAVPYVLLSNLYSAAGKWEEAAKTRRLMKLRGVSKEPGCSWIEMSSKVHRFMSED 670
Query: 484 CVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLV 543
SHP I +++I L++EAGY PD +F LHD+DEE K L YHSEKLAVA+GL+
Sbjct: 671 -RSHPRTAEIYSKVDEIMILIKEAGYVPDMNFALHDMDEEGKELGLAYHSEKLAVAFGLL 729
Query: 544 KLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
+P G PIR+ KNLR+CGDCH+A+K +S V R +ILRD+N FHHF++G CSC DYW
Sbjct: 730 TMPPGAPIRIFKNLRICGDCHTAMKYVSGVFHRHVILRDSNCFHHFREGACSCSDYW 786
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 108/374 (28%), Positives = 190/374 (50%), Gaps = 13/374 (3%)
Query: 43 MLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISW 102
+L + R+DDAR+LFD+MP++D + M+ Y GR++E R++F E P ++ I+W
Sbjct: 47 VLSNLSKCGRVDDARKLFDVMPDRDECSWNTMIGAYANSGRLNEARKLFYETPIRSCITW 106
Query: 103 TTMISGYVNNNRIDVARKLFEVMP----EKNEVSWTAMLMGYTQCGRIQDAWELFKAMPM 158
+++ISGY A +LF M N+ +W ++L + ++ ++ A +
Sbjct: 107 SSLISGYCRYGCDVEALELFWEMQYEGERPNQFTWGSVLRVCSMYVLLEKGKQI-HAHAI 165
Query: 159 KSVVASNSMIL-GL----GQNGEVQKARVVFDQMREK-DDATWSGMIKVYERKGYELEVI 212
K+ SN+ ++ GL + + +A +F+ +K + W+ M+ Y + G + I
Sbjct: 166 KTQFDSNAFVVTGLVDMYAKCKCILEAEYLFELAPDKRNHVLWTAMVTGYSQNGDGHKAI 225
Query: 213 DLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMY 272
+ F M+ EG+ N + S+L+ C S+++ G QVH +VR F +V+V S L+ MY
Sbjct: 226 ECFRDMRGEGIECNQFTFPSILTACGSISACGFGAQVHGCIVRSGFGANVFVGSALVDMY 285
Query: 273 IKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLV 332
KCG+L + + + D V WNS+I G + GLGE++L +F M + D+ T
Sbjct: 286 SKCGDLSNARRMLETMEVDDPVSWNSMIVGCVRQGLGEEALSLFRIMHLRHMKIDEFTYP 345
Query: 333 GVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPF 392
VL+ S+ ++ + S+ K E +VD+ + G + A + E M
Sbjct: 346 SVLNCFSFVMDMRNAMSV-HSLIVKTGFEAYKLVNNALVDMYAKRGYFDYAFDVFEKMT- 403
Query: 393 EPDAIIWGSLLGAC 406
+ D I W SL+ C
Sbjct: 404 DKDVISWTSLVTGC 417
>gi|297741948|emb|CBI33393.3| unnamed protein product [Vitis vinifera]
Length = 752
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 208/539 (38%), Positives = 327/539 (60%), Gaps = 10/539 (1%)
Query: 12 MVRGYVEEGMITEAGTLFWQMPEK-NVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVA 70
M+ Y G + +A LF +P K N V M+ G+ ++ + D+ARRLFD MP KD+V+
Sbjct: 1 MITCYTRNGELAKARNLFNLLPYKWNPVCCNAMVAGYAKNRQFDEARRLFDAMPAKDLVS 60
Query: 71 QTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNE 130
+M+ GY ++G + G + F+EM +++V+SW M+ G+V ++ + + FE +P N
Sbjct: 61 WNSMLTGYTRNGEMRLGLQFFEEMAERDVVSWNLMVDGFVEVGDLNSSWEFFEKIPNPNT 120
Query: 131 VSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREK 190
VSW ML G+ + G+I +A LF MP+++VVA N+MI QN V +A +F +M EK
Sbjct: 121 VSWVTMLCGFARFGKIAEARRLFDQMPIRNVVAWNAMIAAYVQNCHVDEAISLFMEMPEK 180
Query: 191 DDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVH 250
+ +W+ +I Y R G E L M + + + LS CA LA+L G+Q+H
Sbjct: 181 NSISWTTVINGYVRMGKLDEARQLLNQMPYRN-KPDQSTFACGLSSCAHLAALQVGKQLH 239
Query: 251 AQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGE 310
+++ + D++V++ LITMY KCG + +L+F + D+V WNS+I+ YA G G
Sbjct: 240 QLVMKSGYATDLFVSNALITMYAKCGSISSAELLFKDIDHFDVVSWNSLIAAYALNGNGR 299
Query: 311 KSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACM 370
++LK+FH+M GV PD+VT VG+LSACS+ G + +G ++F+ M Y +EP EHYACM
Sbjct: 300 EALKLFHKMEVEGVAPDEVTFVGILSACSHVGLIDQGLKLFKCMVQAYNIEPLAEHYACM 359
Query: 371 VDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNA 430
VDLLGRAG++E+A +L+ M +A IWG+LLGACR H L+LA+ AA+KLL+ EP
Sbjct: 360 VDLLGRAGRLEEAFQLVRGMKINANAGIWGALLGACRIHGNLELAKFAAEKLLEFEPHKT 419
Query: 431 GPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEH 490
Y+LLSN+ A GR+ +VA +R+ M+++ K PG SWIE++ +VH F D +HP
Sbjct: 420 SNYVLLSNMQAEAGRWDEVARVRRLMKEKGAEKQPGWSWIELQNRVHAFLSED-PAHPRA 478
Query: 491 PMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAV-AYGLVKLPEG 548
+ +L + +R G P ++D ++V +++ + + + GL+ + EG
Sbjct: 479 VELCHILRSLTAHMRNTGDMP------LELDVTKEVAGTSHYNMQFQIPSLGLISMVEG 531
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 148/293 (50%), Gaps = 38/293 (12%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MP +++VSW +M+ GY G + F +M E++VVSW +M+ GF+ ++ + F
Sbjct: 53 MPAKDLVSWNSMLTGYTRNGEMRLGLQFFEEMAERDVVSWNLMVDGFVEVGDLNSSWEFF 112
Query: 61 DMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARK 120
+ +P + V+ M+ G+ + G++ E R +FD+MP +NV++W MI+ YV N +D A
Sbjct: 113 EKIPNPNTVSWVTMLCGFARFGKIAEARRLFDQMPIRNVVAWNAMIAAYVQNCHVDEAIS 172
Query: 121 LFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMP----------------------- 157
LF MPEKN +SWT ++ GY + G++ +A +L MP
Sbjct: 173 LFMEMPEKNSISWTTVINGYVRMGKLDEARQLLNQMPYRNKPDQSTFACGLSSCAHLAAL 232
Query: 158 ----------MKS-----VVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVY 202
MKS + SN++I + G + A ++F + D +W+ +I Y
Sbjct: 233 QVGKQLHQLVMKSGYATDLFVSNALITMYAKCGSISSAELLFKDIDHFDVVSWNSLIAAY 292
Query: 203 ERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVR 255
G E + LF M+ EGV + + + +LS C+ + +D G ++ +V+
Sbjct: 293 ALNGNGREALKLFHKMEVEGVAPDEVTFVGILSACSHVGLIDQGLKLFKCMVQ 345
>gi|147770957|emb|CAN76247.1| hypothetical protein VITISV_023383 [Vitis vinifera]
Length = 820
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 225/616 (36%), Positives = 357/616 (57%), Gaps = 22/616 (3%)
Query: 4 RNVVSWTAMVRGYVEEGMITEAGTLFWQM----PEKNVVSWTVMLGGFIRDSRIDDARRL 59
+ +V+WT+++ M +A +LF QM P N +++ +L + ++L
Sbjct: 208 KTIVTWTSLITHLSHFNMHLQALSLFNQMRCSGPYPNQFTFSSILSASAATMMVLHGQQL 267
Query: 60 FDMMP----EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRI 115
++ + ++ T +V Y + + +FD+MP++N++SW +MI G+ +NN
Sbjct: 268 HSLIHKHGFDANIFVGTALVDMYAKCADMHSAVRVFDQMPERNLVSWNSMIVGFFHNNLY 327
Query: 116 DVARKLF-EVMPEK----NEVSWTAML-----MGYTQCGR-IQDAWELFKAMPMKSVVAS 164
D A +F +V+ EK NEVS +++L MG GR + + +P+ V+
Sbjct: 328 DRAVGVFKDVLREKTVIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKYGLVPLTYVM-- 385
Query: 165 NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVR 224
NS++ + + +F + ++D TW+ ++ + + E + F +M++EG+
Sbjct: 386 NSLMDMYFKCRFFDEGVKLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRREGIL 445
Query: 225 VNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLI 284
+ S +VL ASLA+L G +H Q+++ + ++ + LITMY KCG LV +
Sbjct: 446 PDEASFSTVLHSSASLAALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDAYQV 505
Query: 285 FDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKV 344
F+ +++ W ++IS Y +G + +++F M S G+ P VT V VLSACS+TG+V
Sbjct: 506 FEGIEDHNVISWTAMISAYQLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACSHTGRV 565
Query: 345 KEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLG 404
+EG F SMK + + P EHYACMVDLLGRAG +++A + IE+MP +P +WG+LLG
Sbjct: 566 EEGLAHFNSMKKIHDMNPGPEHYACMVDLLGRAGWLDEAKRFIESMPMKPTPSVWGALLG 625
Query: 405 ACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKP 464
ACR + L + AA++L ++EP N G Y+LL+N+ GR + E+R+ M V K
Sbjct: 626 ACRKYGNLKMGREAAERLFEMEPYNPGNYVLLANMCTRSGRLEEANEVRRLMGVNGVRKE 685
Query: 465 PGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEE 524
PGCSWI+V+ +FT D SH I +MLEK+ L+++ GY ++ FV + ++E E
Sbjct: 686 PGCSWIDVKNMTFVFTAHD-RSHSSSDEIYKMLEKLEKLVKKKGYVAETEFVTNHLEENE 744
Query: 525 KVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDAN 584
+ L YHSEKLA+A+GL+ LP PIR+ KNLR CG CH+ +KL SK+ REII+RD N
Sbjct: 745 EEQGLWYHSEKLALAFGLLTLPIDSPIRIKKNLRTCGHCHTVMKLASKIFDREIIVRDIN 804
Query: 585 RFHHFKDGLCSCRDYW 600
RFH F DG CSC DYW
Sbjct: 805 RFHRFADGFCSCGDYW 820
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 89/402 (22%), Positives = 180/402 (44%), Gaps = 59/402 (14%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF-D 61
+ N+ TA+V Y + + A +F QMPE+N+VSW M+ GF ++ D A +F D
Sbjct: 277 DANIFVGTALVDMYAKCADMHSAVRVFDQMPERNLVSWNSMIVGFFHNNLYDRAVGVFKD 336
Query: 62 MMPEKDVV---AQTNMVLGYCQD-GRVDEGREIFDEMPKKNVISWT----TMISGYVNNN 113
++ EK V+ + VL C + G ++ GR++ + K ++ T +++ Y
Sbjct: 337 VLREKTVIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKYGLVPLTYVMNSLMDMYFKCR 396
Query: 114 RIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAM----------PMKSVVA 163
D KLF+ + +++ V+W ++MG+ Q + ++A F M +V+
Sbjct: 397 FFDEGVKLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVLH 456
Query: 164 SNSMILGLGQN-----------------------------GEVQKARVVFDQMREKDDAT 194
S++ + L Q G + A VF+ + + + +
Sbjct: 457 SSASLAALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVIS 516
Query: 195 WSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLV 254
W+ MI Y+ G +VI+LF M EG+ + + + VLS C+ ++ G H +
Sbjct: 517 WTAMISAYQLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACSHTGRVEEG-LAHFNSM 575
Query: 255 RCQFDVDVYVA--SVLITMYIKCGELVKGKLIFDNFASKDI-VMWNSIISGYAQYG---L 308
+ D++ + ++ + + G L + K ++ K +W +++ +YG +
Sbjct: 576 KKIHDMNPGPEHYACMVDLLGRAGWLDEAKRFIESMPMKPTPSVWGALLGACRKYGNLKM 635
Query: 309 GEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREI 350
G ++ + EM P + L+ + C+ +G+++E E+
Sbjct: 636 GREAAERLFEM--EPYNPGNYVLLA--NMCTRSGRLEEANEV 673
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 90/176 (51%), Gaps = 4/176 (2%)
Query: 230 LISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFD--N 287
L +L+ SL H Q+H Q++ + ++ + LI +Y KCG L + L+F +
Sbjct: 145 LNHLLNTAIQTRSLKHATQIHTQIIINNYTSLPFLFNNLINLYAKCGCLNQALLLFSITH 204
Query: 288 FASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEG 347
K IV W S+I+ + + + ++L +F++M SG P+ T +LSA + T V G
Sbjct: 205 HHFKTIVTWTSLITHLSHFNMHLQALSLFNQMRCSGPYPNQFTFSSILSASAATMMVLHG 264
Query: 348 REIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
+++ S+ K+ + +VD+ + + A+++ + MP E + + W S++
Sbjct: 265 QQL-HSLIHKHGFDANIFVGTALVDMYAKCADMHSAVRVFDQMP-ERNLVSWNSMI 318
>gi|326509777|dbj|BAJ87104.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 624
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 213/562 (37%), Positives = 328/562 (58%), Gaps = 9/562 (1%)
Query: 46 GFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTM 105
+ R+D + L + + T+ + + G G + +M + ++
Sbjct: 65 AYAASGRLDHSLTLLGRTKDPTTIFYTSAIHAHSSRGLHLPGLALLSDMLSEGLLPTAHT 124
Query: 106 ISGYVNNNR-IDVARKL----FEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKS 160
+S + R + + R L F++ + TA+L Y + G A LF MP
Sbjct: 125 LSASLPACRGLSLGRALHAYAFKLALSGDSYVATALLSMYARAGDAAAARALFDEMPDPH 184
Query: 161 VVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQK 220
VV+ +M+ G + AR +FD + KD W+ MI Y + G E + LF M +
Sbjct: 185 VVSVTAMLTCYANMGALDDARRLFDGLPRKDFICWNAMIDGYTQHGKPNEALQLFRRMLR 244
Query: 221 EGVRVNFPSLISVLSVCASLASLDHGRQVHAQL--VRCQFDVDVYVASVLITMYIKCGEL 278
+ +++ VLS A L +++ G+ +H+ + RC ++V VA+ L+ MY KCG L
Sbjct: 245 SSAEPDEVTVVLVLSAVAQLGTVESGKWLHSYVKNSRC-VQLNVRVATALVDMYCKCGSL 303
Query: 279 VKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSAC 338
+F +KDIV+WN++I+GYA +G K+L++F ++ G+ P D+T +G+L+AC
Sbjct: 304 EDAVAVFHGIGNKDIVVWNAMINGYAMHGDSRKALEMFVQLRDQGLWPTDITFIGLLNAC 363
Query: 339 SYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAII 398
S++G V+EGR F+SM+ +Y ++PK EHY CMVDLLGRAG +E+A L++++ PDA++
Sbjct: 364 SHSGLVEEGRSFFQSMEHEYGIDPKIEHYGCMVDLLGRAGLIEEAFHLVQSLTITPDAVM 423
Query: 399 WGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRK 458
W SLL ACR H + L + A L+ N+G YILLSNIYA+ G++ +VA +R M+
Sbjct: 424 WVSLLAACRLHKNMALGQRIADFLVANGLANSGMYILLSNIYAAVGKWEEVARVRSMMKA 483
Query: 459 RNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLH 518
+ K PGCS IE+++KV+ F D +SHP I ML+K+ L++E G+ P + VLH
Sbjct: 484 SGIQKEPGCSAIEIDRKVYEFVAGD-MSHPCTDEIYAMLDKMNALVKEHGHVPQTELVLH 542
Query: 519 DVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREI 578
D+DE K +L HSEKLAVA+GL+ G I+++KNLR C DCH+ +KLISK+ R+I
Sbjct: 543 DLDEATKEKALAVHSEKLAVAFGLISSRPGSTIKIVKNLRACSDCHAVLKLISKITSRKI 602
Query: 579 ILRDANRFHHFKDGLCSCRDYW 600
+ RD NRFHHF DG C+C DYW
Sbjct: 603 VFRDRNRFHHFVDGSCTCGDYW 624
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 109/225 (48%), Gaps = 13/225 (5%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVV 69
TA++ Y G A LF +MP+ +VVS T ML + +DDARRLFD +P KD +
Sbjct: 158 TALLSMYARAGDAAAARALFDEMPDPHVVSVTAMLTCYANMGALDDARRLFDGLPRKDFI 217
Query: 70 AQTNMVLGYCQDGRVDEGREIFDEMPKKNV----ISWTTMISGYVNNNRIDVARKLFEVM 125
M+ GY Q G+ +E ++F M + + ++ ++S ++ + L +
Sbjct: 218 CWNAMIDGYTQHGKPNEALQLFRRMLRSSAEPDEVTVVLVLSAVAQLGTVESGKWLHSYV 277
Query: 126 PEKNEVSW-----TAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKA 180
V TA++ Y +CG ++DA +F + K +V N+MI G +G+ +KA
Sbjct: 278 KNSRCVQLNVRVATALVDMYCKCGSLEDAVAVFHGIGNKDIVVWNAMINGYAMHGDSRKA 337
Query: 181 RVVFDQMREK----DDATWSGMIKVYERKGYELEVIDLFTLMQKE 221
+F Q+R++ D T+ G++ G E F M+ E
Sbjct: 338 LEMFVQLRDQGLWPTDITFIGLLNACSHSGLVEEGRSFFQSMEHE 382
>gi|225456313|ref|XP_002280013.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic [Vitis vinifera]
Length = 704
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 209/576 (36%), Positives = 341/576 (59%), Gaps = 18/576 (3%)
Query: 39 SWTVMLGGFIRDSRIDDARRLFDMMP----EKDVVAQTNMVLGYCQDGRVDEGREIFDEM 94
++ ++ I I +++F+ M + D + ++L + + G + + R +FDEM
Sbjct: 133 TYDALVSACIGLKSIRGVKKVFNYMINSGLDPDEYLRNRVLLMHVKCGMMIDARRLFDEM 192
Query: 95 PKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAML---------MGYTQCGR 145
P+KN++SW T+I G V+ A +LF +M + + + M +G GR
Sbjct: 193 PEKNILSWNTIIGGLVDAGDYFEAFRLFLMMWQDFSDAGSRMFVTMIRASAGLGLIFAGR 252
Query: 146 IQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERK 205
+ L K V + ++I + G ++ A+ VFDQM EK W+ +I Y
Sbjct: 253 QLHSCSL-KTGVGGDVFVACALIDMYSKCGSIEDAQCVFDQMPEKTTVGWNSIIAGYALH 311
Query: 206 GYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVA 265
GY E + ++ M+ GV+++ + ++ +CA LASL+H +Q HA LVR F +D+
Sbjct: 312 GYSEEALSMYYEMRDSGVKIDNFTFSIIIRICARLASLEHAKQAHAGLVRHGFGLDIVAN 371
Query: 266 SVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVM 325
+ L+ +Y K G + K +FD K+++ WN++I+GY +G G +++++F M G++
Sbjct: 372 TALVDLYSKWGRIEDAKHVFDMMPHKNVISWNALIAGYGNHGRGVEAVEMFERMLHEGMV 431
Query: 326 PDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMK 385
P+ VT + VLSACSY+G G EIFESM + ++P+ HYACM++LLGR G +++A
Sbjct: 432 PNHVTFLAVLSACSYSGLSDRGWEIFESMSRDHKIKPRAMHYACMIELLGREGLLDEAFA 491
Query: 386 LIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGR 445
LI+ PF+P +W +LL ACR H +L + AA+KL + P+ Y++L NIY GR
Sbjct: 492 LIKDAPFKPTVNMWAALLTACRVHKNFELGKFAAEKLYGMGPEKLSNYVVLLNIYNRSGR 551
Query: 446 FHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMF-TGRDCVSHPEHPMIMRMLEKIGGLL 504
+ A + + +++R + P CSWIE++K+ + F +G C H + I + L+++ +
Sbjct: 552 LEEAAAVIQTLKRRGLRMLPACSWIEIKKQPYGFISGDKC--HAQSKEIYQKLDELMLEI 609
Query: 505 REAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCH 564
+ GY P F+L DVDE+E+ L YHSEKLA+A+GL+ + P++++++ R+CGDCH
Sbjct: 610 SKHGYVPQDKFLLPDVDEQEE-RVLLYHSEKLAIAFGLINTSDWTPLQIVQSHRICGDCH 668
Query: 565 SAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
SAIKLI+ V REI++RDA+RFHHFKDG CSC DYW
Sbjct: 669 SAIKLIALVTRREIVVRDASRFHHFKDGSCSCGDYW 704
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/397 (20%), Positives = 181/397 (45%), Gaps = 58/397 (14%)
Query: 16 YVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEK--------- 66
+V+ GM+ +A LF +MPEKN++SW ++GG + +A RLF MM +
Sbjct: 176 HVKCGMMIDARRLFDEMPEKNILSWNTIIGGLVDAGDYFEAFRLFLMMWQDFSDAGSRMF 235
Query: 67 ------------------------------DVVAQTNMVLGYCQDGRVDEGREIFDEMPK 96
DV ++ Y + G +++ + +FD+MP+
Sbjct: 236 VTMIRASAGLGLIFAGRQLHSCSLKTGVGGDVFVACALIDMYSKCGSIEDAQCVFDQMPE 295
Query: 97 KNVISWTTMISGYVNNNRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWEL 152
K + W ++I+GY + + A ++ M + + +++ ++ + ++ A +
Sbjct: 296 KTTVGWNSIIAGYALHGYSEEALSMYYEMRDSGVKIDNFTFSIIIRICARLASLEHAKQA 355
Query: 153 FKAMPMKS----VVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYE 208
+ +VA+ +++ + G ++ A+ VFD M K+ +W+ +I Y G
Sbjct: 356 HAGLVRHGFGLDIVANTALVDLYSKWGRIEDAKHVFDMMPHKNVISWNALIAGYGNHGRG 415
Query: 209 LEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVR-CQFDVDVYVASV 267
+E +++F M EG+ N + ++VLS C+ D G ++ + R + +
Sbjct: 416 VEAVEMFERMLHEGMVPNHVTFLAVLSACSYSGLSDRGWEIFESMSRDHKIKPRAMHYAC 475
Query: 268 LITMYIKCGELVKG-KLIFDNFASKDIVMWNSIISG---YAQYGLGEKSLKVFHEMFSSG 323
+I + + G L + LI D + MW ++++ + + LG+ + + + G
Sbjct: 476 MIELLGREGLLDEAFALIKDAPFKPTVNMWAALLTACRVHKNFELGKFAAEKLY-----G 530
Query: 324 VMPDDVT-LVGVLSACSYTGKVKEGREIFESMKSKYL 359
+ P+ ++ V +L+ + +G+++E + +++K + L
Sbjct: 531 MGPEKLSNYVVLLNIYNRSGRLEEAAAVIQTLKRRGL 567
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 104/224 (46%), Gaps = 48/224 (21%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGF---------------IR 49
+V A++ Y + G I +A +F QMPEK V W ++ G+ +R
Sbjct: 266 DVFVACALIDMYSKCGSIEDAQCVFDQMPEKTTVGWNSIIAGYALHGYSEEALSMYYEMR 325
Query: 50 DS--RIDD---------ARRLFDMMPEK-------------DVVAQTNMVLGYCQDGRVD 85
DS +ID+ RL + K D+VA T +V Y + GR++
Sbjct: 326 DSGVKIDNFTFSIIIRICARLASLEHAKQAHAGLVRHGFGLDIVANTALVDLYSKWGRIE 385
Query: 86 EGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEK----NEVSWTAMLMGYT 141
+ + +FD MP KNVISW +I+GY N+ R A ++FE M + N V++ A+L +
Sbjct: 386 DAKHVFDMMPHKNVISWNALIAGYGNHGRGVEAVEMFERMLHEGMVPNHVTFLAVLSACS 445
Query: 142 QCGRIQDAWELFKAMPMKSVVASNS-----MILGLGQNGEVQKA 180
G WE+F++M + + MI LG+ G + +A
Sbjct: 446 YSGLSDRGWEIFESMSRDHKIKPRAMHYACMIELLGREGLLDEA 489
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 111/233 (47%), Gaps = 4/233 (1%)
Query: 178 QKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVR-VNFPSLISVLSV 236
++A+V Q+R+ + K+ K Y E ++LF +++ G ++ + +++S
Sbjct: 82 KEAQVNETQLRKPSSELCGQIEKLVFFKRYH-EALELFEILELNGAYDMDSETYDALVSA 140
Query: 237 CASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMW 296
C L S+ ++V ++ D D Y+ + ++ M++KCG ++ + +FD K+I+ W
Sbjct: 141 CIGLKSIRGVKKVFNYMINSGLDPDEYLRNRVLLMHVKCGMMIDARRLFDEMPEKNILSW 200
Query: 297 NSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKS 356
N+II G G ++ ++F M+ V ++ A + G + GR++ S
Sbjct: 201 NTIIGGLVDAGDYFEAFRLFLMMWQDFSDAGSRMFVTMIRASAGLGLIFAGRQL-HSCSL 259
Query: 357 KYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTH 409
K V ++D+ + G +EDA + + MP E + W S++ H
Sbjct: 260 KTGVGGDVFVACALIDMYSKCGSIEDAQCVFDQMP-EKTTVGWNSIIAGYALH 311
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 123/280 (43%), Gaps = 58/280 (20%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEK------------------------- 35
MPE+ V W +++ GY G EA +++++M +
Sbjct: 293 MPEKTTVGWNSIIAGYALHGYSEEALSMYYEMRDSGVKIDNFTFSIIIRICARLASLEHA 352
Query: 36 --------------NVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQD 81
++V+ T ++ + + RI+DA+ +FDMMP K+V++ ++ GY
Sbjct: 353 KQAHAGLVRHGFGLDIVANTALVDLYSKWGRIEDAKHVFDMMPHKNVISWNALIAGYGNH 412
Query: 82 GRVDEGREIFDEMPKK----NVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAM- 136
GR E E+F+ M + N +++ ++S + D ++FE M +++ AM
Sbjct: 413 GRGVEAVEMFERMLHEGMVPNHVTFLAVLSACSYSGLSDRGWEIFESMSRDHKIKPRAMH 472
Query: 137 ------LMGYTQCGRIQDAWELFKAMPMKSVVASNSMILG---LGQNGEVQK--ARVVFD 185
L+G G + +A+ L K P K V + +L + +N E+ K A ++
Sbjct: 473 YACMIELLGRE--GLLDEAFALIKDAPFKPTVNMWAALLTACRVHKNFELGKFAAEKLYG 530
Query: 186 QMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRV 225
EK + + ++ +Y R G E + +++ G+R+
Sbjct: 531 MGPEK-LSNYVVLLNIYNRSGRLEEAAAVIQTLKRRGLRM 569
>gi|297835272|ref|XP_002885518.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331358|gb|EFH61777.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 904
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 229/648 (35%), Positives = 359/648 (55%), Gaps = 50/648 (7%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEK-----NVVSWTVMLGGFIRDSRIDD 55
M ERNVVSWT+M+ GY +A LF++M N V+ ++ + ++
Sbjct: 194 MSERNVVSWTSMICGYARREFAKDAVDLFFRMVRDEDVIPNSVTMVCVISACAKLEDLET 253
Query: 56 ARRLFDMMPEKDVVAQTNMVLG----YCQDGRVDEGREIFDEMPKKNVISWTTMISGYVN 111
+++D + + + M+ Y + +D + +FDE N+ M S YV
Sbjct: 254 GEKVYDFIRDSGIEVNDLMISALVDMYMKCNAIDIAKRLFDEYGASNLDLCNAMASNYVR 313
Query: 112 NNRIDVARKLFEVM------PEKNEV-----------------------------SW--- 133
A + +M P++ + SW
Sbjct: 314 QGLTKEALGVLNLMMDSGIRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNI 373
Query: 134 -TAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDD 192
A++ Y +C R A+ +F M K+VV NS++ G +NGEV A F+ M EK+
Sbjct: 374 CNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYIENGEVDAAWETFNTMPEKNI 433
Query: 193 ATWSGMIKVYERKGYELEVIDLFTLMQ-KEGVRVNFPSLISVLSVCASLASLDHGRQVHA 251
+W+ +I ++ E I++F MQ +E V V+ +++S+ S C L +LD + ++
Sbjct: 434 VSWNTIISALVQENMYEEAIEVFHYMQSQECVNVDGVTMMSIASACGHLGALDLAKWIYY 493
Query: 252 QLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEK 311
+ + + +DV + + L+ M+ +CG+ IF++ ++D+ W + I A G E+
Sbjct: 494 YIEKNRIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNVER 553
Query: 312 SLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMV 371
++++F+EM G+ PD V +G L+AC + G V++G+EIF SM+ + V P+ HY CMV
Sbjct: 554 AIELFNEMIEQGLKPDGVVFIGALTACCHGGLVQQGKEIFNSMEKLHGVSPEDVHYGCMV 613
Query: 372 DLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAG 431
DLLGRAG +E+A++LI+ MP EP+ +IW SLL ACR +++A AA+K+ L P+ G
Sbjct: 614 DLLGRAGLLEEALQLIKDMPTEPNDVIWNSLLAACRVQGNVEMAAFAAEKIQVLAPERTG 673
Query: 432 PYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHP 491
Y+LLSN+YAS GR++D+A++R +M+++ + KPPG S I++ K H FT D SHPE
Sbjct: 674 SYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSVIQIRGKTHEFTSGD-ESHPEMR 732
Query: 492 MIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPI 551
I ML+++ + G+ PD S VL DVDE+EK+ L HSEKLA+A+GL+ +G I
Sbjct: 733 KIEAMLDELSQRASDLGHVPDLSNVLMDVDEQEKIFMLSRHSEKLAMAFGLISSNKGTTI 792
Query: 552 RVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDY 599
R++KNLRVC CHS K SKV REIILRD NRFH + G CSC D+
Sbjct: 793 RIVKNLRVCSYCHSFAKFASKVYNREIILRDNNRFHFIRQGKCSCSDF 840
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/373 (23%), Positives = 177/373 (47%), Gaps = 33/373 (8%)
Query: 65 EKDVVAQTNMVLGYCQDGRVDE---GREIFDEMPK-KNVISWTTMISGYVNNNRIDVARK 120
+ DV A T +V C+ G + +E+F+ + ++I GY ++ A
Sbjct: 60 DDDVSAITKLVARSCELGTRESLSFAKEVFENGESYGTCFMYNSLIRGYASSGLCKEAIL 119
Query: 121 LFEVM------PEKNEVSWTAMLMGYTQCGRIQDAWE-------LFKAMPMKSVVASNSM 167
LF M P+K + G + C + +D + K K + NS+
Sbjct: 120 LFIRMMNSGISPDKYTFPF-----GLSVCAKSRDKGNGIQIHGLIIKMDYAKDLFVQNSL 174
Query: 168 ILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLF-TLMQKEGVRVN 226
+ + GE+ AR VFD+M E++ +W+ MI Y R+ + + +DLF +++ E V N
Sbjct: 175 VHFYAECGELDCARKVFDEMSERNVVSWTSMICGYARREFAKDAVDLFFRMVRDEDVIPN 234
Query: 227 FPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFD 286
+++ V+S CA L L+ G +V+ + +V+ + S L+ MY+KC + K +FD
Sbjct: 235 SVTMVCVISACAKLEDLETGEKVYDFIRDSGIEVNDLMISALVDMYMKCNAIDIAKRLFD 294
Query: 287 NFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKE 346
+ + ++ + N++ S Y + GL +++L V + M SG+ PD ++++ +S+CS +
Sbjct: 295 EYGASNLDLCNAMASNYVRQGLTKEALGVLNLMMDSGIRPDRISMLSAISSCSQLRNILW 354
Query: 347 GREIFESMKSKYLVEPKTEHY----ACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSL 402
G+ Y++ E + ++D+ + + + A ++ + M + W S+
Sbjct: 355 GKSC-----HGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMS-NKTVVTWNSI 408
Query: 403 LGACRTHMKLDLA 415
+ + ++D A
Sbjct: 409 VAGYIENGEVDAA 421
>gi|302814190|ref|XP_002988779.1| hypothetical protein SELMODRAFT_128847 [Selaginella moellendorffii]
gi|300143350|gb|EFJ10041.1| hypothetical protein SELMODRAFT_128847 [Selaginella moellendorffii]
Length = 796
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 213/612 (34%), Positives = 347/612 (56%), Gaps = 17/612 (2%)
Query: 4 RNVVSWTAMVRGYVEEGMITEAGTLFWQMP-EKNVVSWTVMLGGFIRDSRIDDARRLFDM 62
R+V SW AM+ Y + G EA L+ M E +V ++T +L +D R++ +
Sbjct: 187 RSVSSWNAMIAAYAQSGHFEEAIRLYEDMDVEPSVRTFTSVLSACSNLGLLDQGRKIHAL 246
Query: 63 MP----EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVA 118
+ E D+ Q ++ Y + +D+ +IF +P+++V+SW+ MI+ + + D A
Sbjct: 247 ISSRGTELDLSLQNALLTMYARCKCLDDAAKIFQRLPRRDVVSWSAMIAAFAETDLFDEA 306
Query: 119 RKLFEVMP----EKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMK----SVVASNSMILG 170
+ + M N ++ ++L+ G ++ + + ++V +++
Sbjct: 307 IEFYSKMQLEGVRPNYYTFASVLLACASVGDLRAGRAVHDQILGNGYKITLVNGTALVDL 366
Query: 171 LGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSL 230
G + +AR +FDQ+ +D+ W+ +I Y ++G+ V++L+ M K +V +
Sbjct: 367 YTSYGSLDEARSLFDQIENRDEGLWTVLIGGYSKQGHRTGVLELYREM-KNTTKVPATKI 425
Query: 231 I--SVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNF 288
I V+S CASL + RQ H+ + D +A+ L+ MY + G L + +FD
Sbjct: 426 IYSCVISACASLGAFADARQAHSDIEADGMISDFVLATSLVNMYSRWGNLESARQVFDKM 485
Query: 289 ASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGR 348
+S+D + W ++I+GYA++G +L ++ EM G P ++T + VL ACS+ G ++G+
Sbjct: 486 SSRDTLAWTTLIAGYAKHGEHGLALGLYKEMELEGAEPSELTFMVVLYACSHAGLQEQGK 545
Query: 349 EIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRT 408
++F S++S Y + P HY+C++DLL RAG++ DA +LI AMP EP+ + W SLLGA R
Sbjct: 546 QLFISIQSDYAMHPNIAHYSCIIDLLSRAGRLSDAEELINAMPVEPNDVTWSSLLGASRI 605
Query: 409 HMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCS 468
H + A AA ++ +L+P + Y+LLSN++A G +A +R M R V K G S
Sbjct: 606 HKDVKRATHAAGQITKLDPVDPASYVLLSNVHAVTGNLAGMASVRNTMVARGVKKRRGSS 665
Query: 469 WIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHS 528
WIEV ++H F D SHP I L+++ ++EAGY P+S VLHDV E+EK
Sbjct: 666 WIEVADQIHEFNVGDN-SHPRFQEIFAELQRLSPKIKEAGYVPESEEVLHDVGEKEKELL 724
Query: 529 LRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHH 588
LR HSEKLA+A+GL+ G +R+ LR+C DCHSA+K IS + REII+RD++RFH
Sbjct: 725 LRLHSEKLAIAFGLIATAPGTTLRIFNTLRICHDCHSAVKFISAIARREIIVRDSSRFHK 784
Query: 589 FKDGLCSCRDYW 600
F+DG CSC DYW
Sbjct: 785 FRDGQCSCGDYW 796
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 116/481 (24%), Positives = 212/481 (44%), Gaps = 47/481 (9%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMP 64
NV +VR Y + G + A F + KN SW ML + ++ A L+ M
Sbjct: 57 NVFLGNEIVRAYGKCGSVASARVAFDAIARKNDYSWGSMLTAYAQNGHYRAALDLYKRMD 116
Query: 65 EKDVVAQTNMVLGYCQD-GRVDEGREIFDEMP-----KKNVISWTTMISGYVNNNRIDVA 118
+ VLG C ++EG+ I + K +VI ++++ Y ++ A
Sbjct: 117 LQPNPVVYTTVLGACASIEALEEGKAIHSRISGTKGLKLDVILENSLLTMYAKCGSLEDA 176
Query: 119 RKLFEVMPEKNEV-SWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMI------LGL 171
++LFE M + V SW AM+ Y Q G ++A L++ M ++ V + + + LGL
Sbjct: 177 KRLFERMSGRRSVSSWNAMIAAYAQSGHFEEAIRLYEDMDVEPSVRTFTSVLSACSNLGL 236
Query: 172 GQNGE------------------------------VQKARVVFDQMREKDDATWSGMIKV 201
G + A +F ++ +D +WS MI
Sbjct: 237 LDQGRKIHALISSRGTELDLSLQNALLTMYARCKCLDDAAKIFQRLPRRDVVSWSAMIAA 296
Query: 202 YERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVD 261
+ E I+ ++ MQ EGVR N+ + SVL CAS+ L GR VH Q++ + +
Sbjct: 297 FAETDLFDEAIEFYSKMQLEGVRPNYYTFASVLLACASVGDLRAGRAVHDQILGNGYKIT 356
Query: 262 VYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFS 321
+ + L+ +Y G L + + +FD ++D +W +I GY++ G L+++ EM +
Sbjct: 357 LVNGTALVDLYTSYGSLDEARSLFDQIENRDEGLWTVLIGGYSKQGHRTGVLELYREMKN 416
Query: 322 SGVMP-DDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQV 380
+ +P + V+SAC+ G + R+ +++ ++ + +V++ R G +
Sbjct: 417 TTKVPATKIIYSCVISACASLGAFADARQAHSDIEADGMISDFVLATS-LVNMYSRWGNL 475
Query: 381 EDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIY 440
E A ++ + M D + W +L+ H + LA + K ++LE + +Y
Sbjct: 476 ESARQVFDKMS-SRDTLAWTTLIAGYAKHGEHGLA-LGLYKEMELEGAEPSELTFMVVLY 533
Query: 441 A 441
A
Sbjct: 534 A 534
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 108/433 (24%), Positives = 198/433 (45%), Gaps = 61/433 (14%)
Query: 53 IDDARRLFDMM---PEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGY 109
++ R++ D + +V +V Y + G V R FD + +KN SW +M++ Y
Sbjct: 40 LESVRQIHDRISGAASANVFLGNEIVRAYGKCGSVASARVAFDAIARKNDYSWGSMLTAY 99
Query: 110 VNNNRIDVARKLFEVMP-EKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMK--------- 159
N A L++ M + N V +T +L C I+ A E KA+ +
Sbjct: 100 AQNGHYRAALDLYKRMDLQPNPVVYTTVLGA---CASIE-ALEEGKAIHSRISGTKGLKL 155
Query: 160 SVVASNSMILGLGQNGEVQKARVVFDQMR-EKDDATWSGMIKVYERKGYELEVIDLFTLM 218
V+ NS++ + G ++ A+ +F++M + ++W+ MI Y + G+ E I L+ M
Sbjct: 156 DVILENSLLTMYAKCGSLEDAKRLFERMSGRRSVSSWNAMIAAYAQSGHFEEAIRLYEDM 215
Query: 219 QKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGEL 278
V + + SVLS C++L LD GR++HA + ++D+ + + L+TMY +C L
Sbjct: 216 D---VEPSVRTFTSVLSACSNLGLLDQGRKIHALISSRGTELDLSLQNALLTMYARCKCL 272
Query: 279 VKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSAC 338
IF +D+V W+++I+ +A+ L +++++ + +M GV P+ T VL AC
Sbjct: 273 DDAAKIFQRLPRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQLEGVRPNYYTFASVLLAC 332
Query: 339 SYTGKVKEGREIFES-MKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAI 397
+ G ++ GR + + + + Y + + +VDL G +++A L +
Sbjct: 333 ASVGDLRAGRAVHDQILGNGYKI--TLVNGTALVDLYTSYGSLDEARSLFD--------- 381
Query: 398 IWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMR 457
Q+E ++ G + +L Y+ QG V EL + M
Sbjct: 382 --------------------------QIENRDEGLWTVLIGGYSKQGHRTGVLELYREM- 414
Query: 458 KRNVIKPPGCSWI 470
+N K P I
Sbjct: 415 -KNTTKVPATKII 426
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/322 (21%), Positives = 139/322 (43%), Gaps = 25/322 (7%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM------PEKNVVSWTVMLGGFIRDSRID 54
+P R+VVSW+AM+ + E + EA + +M P + ++ + D R
Sbjct: 282 LPRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQLEGVRPNYYTFASVLLACASVGDLRAG 341
Query: 55 DA--RRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
A ++ + +V T +V Y G +DE R +FD++ ++ WT +I GY
Sbjct: 342 RAVHDQILGNGYKITLVNGTALVDLYTSYGSLDEARSLFDQIENRDEGLWTVLIGGYSKQ 401
Query: 113 NRIDVARKLFEVMPEKNEVSWTAMLMG--YTQC---GRIQDAWELFKAMPMKSVVA---- 163
+L+ M +V T ++ + C G DA + + +++
Sbjct: 402 GHRTGVLELYREMKNTTKVPATKIIYSCVISACASLGAFADARQAHSDIEADGMISDFVL 461
Query: 164 SNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGV 223
+ S++ + G ++ AR VFD+M +D W+ +I Y + G + L+ M+ EG
Sbjct: 462 ATSLVNMYSRWGNLESARQVFDKMSSRDTLAWTTLIAGYAKHGEHGLALGLYKEMELEGA 521
Query: 224 RVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDV----DVYVASVLITMYIKCGELV 279
+ + + VL C+ + G+Q+ + Q D ++ S +I + + G L
Sbjct: 522 EPSELTFMVVLYACSHAGLQEQGKQL---FISIQSDYAMHPNIAHYSCIIDLLSRAGRLS 578
Query: 280 KGKLIFDNF-ASKDIVMWNSII 300
+ + + + V W+S++
Sbjct: 579 DAEELINAMPVEPNDVTWSSLL 600
>gi|334187432|ref|NP_196098.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635619|sp|Q9LZ19.2|PP364_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g04780
gi|332003400|gb|AED90783.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 635
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 220/548 (40%), Positives = 333/548 (60%), Gaps = 17/548 (3%)
Query: 65 EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLF-E 123
E DV ++ Y + G V+ R++FD M +++++SW TMI Y N A +F E
Sbjct: 93 EGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLE 152
Query: 124 VMPEKNEVSWTAMLMGYTQCGRIQDAWELFK--AMPMKSVVASN----SMILGL-GQNGE 176
+ E + S + + CG DA E K + +K+ + N + +L L + G
Sbjct: 153 MRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGM 212
Query: 177 VQKARVVFDQMREKDDATWSGMIKVY-ERKGYELEVIDLFTLMQKEGVRVNFPSLISVLS 235
++ A VF+ M++K TWS M+ Y + K YE E + L+ Q+ + N +L SV+
Sbjct: 213 IKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYE-EALLLYRRAQRMSLEQNQFTLSSVIC 271
Query: 236 VCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVM 295
C++LA+L G+Q+HA + + F +V+VAS + MY KCG L + +IF K++ +
Sbjct: 272 ACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLEL 331
Query: 296 WNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMK 355
WN+IISG+A++ ++ + +F +M G+ P++VT +LS C +TG V+EGR F+ M+
Sbjct: 332 WNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMR 391
Query: 356 SKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLA 415
+ Y + P HY+CMVD+LGRAG + +A +LI+++PF+P A IWGSLL +CR + L+LA
Sbjct: 392 TTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKNLELA 451
Query: 416 EVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKK 475
EVAA+KL +LEP+NAG ++LLSNIYA+ ++ ++A+ RK +R +V K G SWI+++ K
Sbjct: 452 EVAAEKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLLRDCDVKKVRGKSWIDIKDK 511
Query: 476 VHMFTGRDCVSHPEHPMIMRMLEKIGGL---LREAGYCPDSSFVLHDVDEEEKVHSLRYH 532
VH F+ V HP I + + L R+ GY P LHDV+ +K L H
Sbjct: 512 VHTFS----VGESGHPRIREICSTLDNLVIKFRKFGYKPSVEHELHDVEIGKKEELLMQH 567
Query: 533 SEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDG 592
SEKLA+ +GL+ LPE P+R+MKNLR+C DCH +K S R II+RD NRFHHF DG
Sbjct: 568 SEKLALVFGLMCLPESSPVRIMKNLRICVDCHEFMKAASMATRRFIIVRDVNRFHHFSDG 627
Query: 593 LCSCRDYW 600
CSC D+W
Sbjct: 628 HCSCGDFW 635
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/320 (21%), Positives = 134/320 (41%), Gaps = 64/320 (20%)
Query: 120 KLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQK 179
K+ + E + ++ Y++CG ++ A ++F M +S+V+
Sbjct: 86 KIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVS---------------- 129
Query: 180 ARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCAS 239
W+ MI +Y R E E +D+F M+ EG + + ++ SVLS C
Sbjct: 130 ---------------WNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGV 174
Query: 240 LASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSI 299
+++H V+ D+++YV + L+ +Y KCG + +F++ K V W+S+
Sbjct: 175 NCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSM 234
Query: 300 ISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFE------- 352
++GY Q E++L ++ + + TL V+ ACS + EG+++
Sbjct: 235 VAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGF 294
Query: 353 ------------------SMKSKYLV-----EPKTEHYACMVDLLGRAGQVEDAMKLIEA 389
S++ Y++ E E + ++ + + ++ M L E
Sbjct: 295 GSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEK 354
Query: 390 MP---FEPDAIIWGSLLGAC 406
M P+ + + SLL C
Sbjct: 355 MQQDGMHPNEVTFSSLLSVC 374
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/331 (21%), Positives = 160/331 (48%), Gaps = 32/331 (9%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRID----DA 56
M ER++VSW M+ Y M +EA +F +M + + + ++ +
Sbjct: 122 MLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALEC 181
Query: 57 RRLFDMMPEK----DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
++L + + ++ T ++ Y + G + + ++F+ M K+ ++W++M++GYV N
Sbjct: 182 KKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQN 241
Query: 113 NRIDVA----RKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMI 168
+ A R+ + E+N+ + ++++ + + + ++ A+ KS SN +
Sbjct: 242 KNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQM-HAVICKSGFGSNVFV 300
Query: 169 LG-----LGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGV 223
+ G ++++ ++F +++EK+ W+ +I + + EV+ LF MQ++G+
Sbjct: 301 ASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGM 360
Query: 224 RVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDV--DVYVASVLITMYIKCG----- 276
N + S+LSVC ++ GR+ +L+R + + +V S ++ + + G
Sbjct: 361 HPNEVTFSSLLSVCGHTGLVEEGRRFF-KLMRTTYGLSPNVVHYSCMVDILGRAGLLSEA 419
Query: 277 -ELVKGKLIFDNFASKDIVMWNSIISGYAQY 306
EL+K + FD AS +W S+++ Y
Sbjct: 420 YELIKS-IPFDPTAS----IWGSLLASCRVY 445
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 89/173 (51%), Gaps = 2/173 (1%)
Query: 233 VLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKD 292
+L +CA ++ + H +++R + DV + +VLI Y KCG + + +FD +
Sbjct: 67 ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERS 126
Query: 293 IVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFE 352
+V WN++I Y + + ++L +F EM + G + T+ VLSAC E +++
Sbjct: 127 LVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKL-H 185
Query: 353 SMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
+ K ++ ++DL + G ++DA+++ E+M + ++ W S++
Sbjct: 186 CLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQ-DKSSVTWSSMVAG 237
>gi|357156786|ref|XP_003577575.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Brachypodium distachyon]
Length = 694
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 196/497 (39%), Positives = 298/497 (59%), Gaps = 31/497 (6%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MP R++VSW M+ GYV G + A LF +P NVVSW +L G+ R RI +AR LF
Sbjct: 193 MPARDMVSWNLMLEGYVRAGDVDSAAGLFAGVPSPNVVSWVTLLNGYCRAGRIGEARELF 252
Query: 61 DMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMIS------------- 107
D +P+++V A M+ GY + ++E ++F EMP KN ISWTTMIS
Sbjct: 253 DRIPDRNVAAWNVMLSGYLRLSHMEEAYKLFTEMPDKNSISWTTMISALVRGGKLQEAKD 312
Query: 108 ------------------GYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDA 149
GY+ + ID AR +F+ + ++ V W M+ GY CG + +A
Sbjct: 313 LLDKMPFDSFAAKTALMHGYLQSKMIDDARLIFDGLEVRDAVCWNTMISGYVHCGMLDEA 372
Query: 150 WELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYEL 209
LF+ MP K +V+ N+MI G +G+++KA +F +M +++ +W+ +I + + G +
Sbjct: 373 MVLFQQMPNKDMVSWNTMIAGYAHDGQMRKAVGIFRKMNQRNTVSWNSVISGFVQNGLCV 432
Query: 210 EVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLI 269
E + F LM+++ R ++ + LS CA LA+L GRQ H+ L R + D + + LI
Sbjct: 433 EALQHFVLMRRDAKRADWSTYACCLSACADLAALHVGRQFHSLLARSGYIGDSFAGNALI 492
Query: 270 TMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDV 329
+ Y KCG +++ + +FD + DIV WN++I GYA G G +++ VF EM + V PD+V
Sbjct: 493 SAYAKCGRILEARQVFDEMPAPDIVSWNALIDGYASNGHGTEAISVFREMEDNDVRPDEV 552
Query: 330 TLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEA 389
T VGVLSACS+ G + EG + F SM Y + P EHYACMVDLLGR+G++ +A ++I+
Sbjct: 553 TFVGVLSACSHAGLIDEGFDFFNSMTKDYALRPVAEHYACMVDLLGRSGRLSEAFEIIQG 612
Query: 390 MPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDV 449
M +P+A +WG++LGACR H +LA++AA+KL +LEP Y+LLSNI A G++ +
Sbjct: 613 MQVQPNAGVWGAMLGACRVHKNHELAQLAAEKLYELEPHKTSNYVLLSNITAEAGKWDEA 672
Query: 450 AELRKNMRKRNVIKPPG 466
+R +++R V K PG
Sbjct: 673 QNMRVFIKERGVHKTPG 689
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 130/493 (26%), Positives = 225/493 (45%), Gaps = 96/493 (19%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MP RN VS+ AM+ G I +A LF ++P +N VSW M+ R+ DAR LF
Sbjct: 37 MPSRNTVSYNAMLSALARHGRIADARRLFDEIPRRNTVSWNAMIAACSDHGRVADARDLF 96
Query: 61 DMMPEKDVVAQT--------------------------------NMVLGYCQDGRVDEGR 88
D MP +D + T M+ GY + GR D+
Sbjct: 97 DAMPARDGFSWTLMVSCYARAGELGLARDALDRMPGDKCTACYNAMISGYAKHGRFDDAV 156
Query: 89 EIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQD 148
+ EMP ++ISW +++ G N + A K F+ MP ++ VSW ML GY + G +
Sbjct: 157 ALLREMPAPDIISWNSVLVGLTRNGEMVRAVKFFDEMPARDMVSWNLMLEGYVRAGDVDS 216
Query: 149 AWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYE 208
A LF +P +VV+ +++ G + G + +AR +FD++ +++ A W+ M+ Y R +
Sbjct: 217 AAGLFAGVPSPNVVSWVTLLNGYCRAGRIGEARELFDRIPDRNVAAWNVMLSGYLRLSHM 276
Query: 209 LEVIDLFTLMQKEGVRVNFPSLISVL------------------SVCASLASLDHGRQVH 250
E LFT M + +++ ++IS L A+ +L HG +
Sbjct: 277 EEAYKLFTEMPDKN-SISWTTMISALVRGGKLQEAKDLLDKMPFDSFAAKTALMHG-YLQ 334
Query: 251 AQLV---RCQFD----VDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGY 303
++++ R FD D + +I+ Y+ CG L + ++F +KD+V WN++I+GY
Sbjct: 335 SKMIDDARLIFDGLEVRDAVCWNTMISGYVHCGMLDEAMVLFQQMPNKDMVSWNTMIAGY 394
Query: 304 AQYGLGEKSLKVFHEMFS----------SGVMPDDV---------------------TLV 332
A G K++ +F +M SG + + + T
Sbjct: 395 AHDGQMRKAVGIFRKMNQRNTVSWNSVISGFVQNGLCVEALQHFVLMRRDAKRADWSTYA 454
Query: 333 GVLSACSYTGKVKEGREIFESM--KSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAM 390
LSAC+ + GR+ F S+ +S Y+ + + ++ + G++ +A ++ + M
Sbjct: 455 CCLSACADLAALHVGRQ-FHSLLARSGYIGDSFAGN--ALISAYAKCGRILEARQVFDEM 511
Query: 391 PFEPDAIIWGSLL 403
P PD + W +L+
Sbjct: 512 P-APDIVSWNALI 523
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 125/483 (25%), Positives = 219/483 (45%), Gaps = 66/483 (13%)
Query: 17 VEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVL 76
G + A LF MP +N VS+ ML R RI DARRLFD +P ++ V+ M+
Sbjct: 22 ARSGQLAAARRLFDSMPSRNTVSYNAMLSALARHGRIADARRLFDEIPRRNTVSWNAMIA 81
Query: 77 GYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMP-EKNEVSWTA 135
GRV + R++FD MP ++ SWT M+S Y + +AR + MP +K + A
Sbjct: 82 ACSDHGRVADARDLFDAMPARDGFSWTLMVSCYARAGELGLARDALDRMPGDKCTACYNA 141
Query: 136 MLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATW 195
M+ GY + GR DA L + MP +++ NS+++GL +NGE+ +A FD+M +D +W
Sbjct: 142 MISGYAKHGRFDDAVALLREMPAPDIISWNSVLVGLTRNGEMVRAVKFFDEMPARDMVSW 201
Query: 196 SGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVR 255
+ M++ Y R G LF V P+++S ++
Sbjct: 202 NLMLEGYVRAGDVDSAAGLFA-------GVPSPNVVSWVT-------------------- 234
Query: 256 CQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKV 315
L+ Y + G + + + +FD +++ WN ++SGY + E++ K+
Sbjct: 235 ------------LLNGYCRAGRIGEARELFDRIPDRNVAAWNVMLSGYLRLSHMEEAYKL 282
Query: 316 FHEMFSSGVMPD--DVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDL 373
F E MPD ++ ++SA GK++E +++ + M + +
Sbjct: 283 FTE------MPDKNSISWTTMISALVRGGKLQEAKDLLDKMPFDSFAAKTALMHGYL--- 333
Query: 374 LGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPY 433
++ ++DA + + + DA+ W +++ LD A V + Q+ K+ +
Sbjct: 334 --QSKMIDDARLIFDGLEVR-DAVCWNTMISGYVHCGMLDEAMVLFQ---QMPNKDMVSW 387
Query: 434 ILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRD-CVSHPEHPM 492
+ YA G+ + + M +RN + SW V + F CV +H +
Sbjct: 388 NTMIAGYAHDGQMRKAVGIFRKMNQRNTV-----SWNSV---ISGFVQNGLCVEALQHFV 439
Query: 493 IMR 495
+MR
Sbjct: 440 LMR 442
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 79/154 (51%), Gaps = 9/154 (5%)
Query: 262 VYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFS 321
VY ++ +T + G+L + +FD+ S++ V +N+++S A++G + ++F E+
Sbjct: 11 VYRSNQELTRLARSGQLAAARRLFDSMPSRNTVSYNAMLSALARHGRIADARRLFDEIPR 70
Query: 322 SGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVE 381
+ V+ +++ACS G+V + R++F++M ++ + MV RAG++
Sbjct: 71 R----NTVSWNAMIAACSDHGRVADARDLFDAMPAR-----DGFSWTLMVSCYARAGELG 121
Query: 382 DAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLA 415
A ++ MP + + +++ H + D A
Sbjct: 122 LARDALDRMPGDKCTACYNAMISGYAKHGRFDDA 155
>gi|145333540|ref|NP_001078415.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332658995|gb|AEE84395.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 462
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 197/441 (44%), Positives = 293/441 (66%), Gaps = 2/441 (0%)
Query: 161 VVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQK 220
+ NS++ G+V A VFD+M EKD W+ +I + G E + L+T M
Sbjct: 23 IYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNS 82
Query: 221 EGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVK 280
+G++ + +++S+LS CA + +L G++VH +++ +++ ++VL+ +Y +CG + +
Sbjct: 83 KGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEE 142
Query: 281 GKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSS-GVMPDDVTLVGVLSACS 339
K +FD K+ V W S+I G A G G++++++F M S+ G++P ++T VG+L ACS
Sbjct: 143 AKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACS 202
Query: 340 YTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIW 399
+ G VKEG E F M+ +Y +EP+ EH+ CMVDLL RAGQV+ A + I++MP +P+ +IW
Sbjct: 203 HCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIW 262
Query: 400 GSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKR 459
+LLGAC H DLAE A ++LQLEP ++G Y+LLSN+YAS+ R+ DV ++RK M +
Sbjct: 263 RTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRD 322
Query: 460 NVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHD 519
V K PG S +EV +VH F D SHP+ I L+++ G LR GY P S V D
Sbjct: 323 GVKKVPGHSLVEVGNRVHEFLMGD-KSHPQSDAIYAKLKEMTGRLRSEGYVPQISNVYVD 381
Query: 520 VDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREII 579
V+EEEK +++ YHSEK+A+A+ L+ PE PI V+KNLRVC DCH AIKL+SKV REI+
Sbjct: 382 VEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHLAIKLVSKVYNREIV 441
Query: 580 LRDANRFHHFKDGLCSCRDYW 600
+RD +RFHHFK+G CSC+DYW
Sbjct: 442 VRDRSRFHHFKNGSCSCQDYW 462
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 93/164 (56%), Gaps = 2/164 (1%)
Query: 240 LASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSI 299
+A + G +H+ ++R F +YV + L+ +Y CG++ +FD KD+V WNS+
Sbjct: 1 MADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSV 60
Query: 300 ISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYL 359
I+G+A+ G E++L ++ EM S G+ PD T+V +LSAC+ G + G+ + M K
Sbjct: 61 INGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYM-IKVG 119
Query: 360 VEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
+ ++DL R G+VE+A L + M + +++ W SL+
Sbjct: 120 LTRNLHSSNVLLDLYARCGRVEEAKTLFDEM-VDKNSVSWTSLI 162
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 100/198 (50%), Gaps = 18/198 (9%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV----VSWTVMLGGFIRDSRIDDA 56
MPE+++V+W +++ G+ E G EA L+ +M K + + +L + +
Sbjct: 49 MPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLG 108
Query: 57 RRLFDMMPEKDV---VAQTNMVLG-YCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+R+ M + + + +N++L Y + GRV+E + +FDEM KN +SWT++I G N
Sbjct: 109 KRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVN 168
Query: 113 NRIDVARKLFEVMPEKN-----EVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVAS--- 164
A +LF+ M E+++ +L + CG +++ +E F+ M + +
Sbjct: 169 GFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIE 228
Query: 165 --NSMILGLGQNGEVQKA 180
M+ L + G+V+KA
Sbjct: 229 HFGCMVDLLARAGQVKKA 246
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 95/194 (48%), Gaps = 13/194 (6%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEK--- 66
+++ Y G + A +F +MPEK++V+W ++ GF + + ++A L+ M K
Sbjct: 27 NSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIK 86
Query: 67 -DVVAQTNMVLGYCQDGRVDEGREIFDEMPK----KNVISWTTMISGYVNNNRIDVARKL 121
D +++ + G + G+ + M K +N+ S ++ Y R++ A+ L
Sbjct: 87 PDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTL 146
Query: 122 FEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMP-----MKSVVASNSMILGLGQNGE 176
F+ M +KN VSWT++++G G ++A ELFK M + + ++ G
Sbjct: 147 FDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGM 206
Query: 177 VQKARVVFDQMREK 190
V++ F +MRE+
Sbjct: 207 VKEGFEYFRRMREE 220
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/252 (19%), Positives = 123/252 (48%), Gaps = 13/252 (5%)
Query: 68 VVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPE 127
+ Q +++ Y G V ++FD+MP+K++++W ++I+G+ N + + A L+ M
Sbjct: 23 IYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNS 82
Query: 128 K----NEVSWTAMLMGYTQCGRIQDAWE----LFKAMPMKSVVASNSMILGLGQNGEVQK 179
K + + ++L + G + + K +++ +SN ++ + G V++
Sbjct: 83 KGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEE 142
Query: 180 ARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQK-EGVRVNFPSLISVLSVCA 238
A+ +FD+M +K+ +W+ +I G+ E I+LF M+ EG+ + + +L C+
Sbjct: 143 AKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACS 202
Query: 239 SLASLDHGRQVHAQLVRCQFDVDVYVA--SVLITMYIKCGELVKGKLIFDNFASK-DIVM 295
+ G + ++ R ++ ++ + ++ + + G++ K + + ++V+
Sbjct: 203 HCGMVKEGFEYFRRM-REEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVI 261
Query: 296 WNSIISGYAQYG 307
W +++ +G
Sbjct: 262 WRTLLGACTVHG 273
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 93/230 (40%), Gaps = 35/230 (15%)
Query: 4 RNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMM 63
RN+ S ++ Y G + EA TLF +M +KN VSWT ++ G + +A LF M
Sbjct: 122 RNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYM 181
Query: 64 PEKDVVAQTNM----VLGYCQD-GRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVA 118
+ + + +L C G V EG E F M
Sbjct: 182 ESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRM------------------------ 217
Query: 119 RKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGL----GQN 174
R+ +++ P L+ + G+++ A+E K+MPM+ V +LG G +
Sbjct: 218 REEYKIEPRIEHFGCMVDLLA--RAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDS 275
Query: 175 GEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVR 224
+ AR+ Q+ + + +Y + +V + M ++GV+
Sbjct: 276 DLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVK 325
>gi|225450911|ref|XP_002280644.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14330
[Vitis vinifera]
gi|296088358|emb|CBI36803.3| unnamed protein product [Vitis vinifera]
Length = 652
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 202/532 (37%), Positives = 313/532 (58%), Gaps = 17/532 (3%)
Query: 83 RVDEGREIFDE------MPKKNVISWTTMISGYVNNNRIDVARKLF-EVMPEKNEVSWTA 135
RVDE R +F++ +P+ W M GY N A L+ E++ + ++ A
Sbjct: 124 RVDEARRVFEDGGEDVDLPES---VWVAMGIGYSRNGYPKEALLLYYEMVCQFGQLGNFA 180
Query: 136 MLMGYTQCGRIQDAW-------ELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMR 188
M C + D ++ KA V +N+++ ++G +A VFD M
Sbjct: 181 FSMALKACSDLGDLQTGRAVHAQVLKATEDPDQVVNNALLRLYSEDGCFDEALRVFDGMP 240
Query: 189 EKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQ 248
++ +W+ +I +K E I+ F +MQ +G+ ++ +L ++L VCA + +L G++
Sbjct: 241 HRNVVSWNSLIAGLVKKDGVFEAIEAFRIMQGKGMGFSWVTLTTILPVCARVTALGSGKE 300
Query: 249 VHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGL 308
+HA +V+ D V + L+ MY KCG + + +F+ KD+ WN++I+GYA G
Sbjct: 301 IHAVIVKSTAKPDAPVLNSLVDMYAKCGAMDYCRRVFNGMQGKDLTSWNTLITGYAINGR 360
Query: 309 GEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYA 368
++++ F EM SG PD +T + +LS CS+ G +G +FE MK Y + P EHYA
Sbjct: 361 MTEAMESFQEMICSGFSPDGITFIALLSGCSHAGLADDGCRLFEMMKMDYGISPTVEHYA 420
Query: 369 CMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPK 428
C+VD+LGRAG++++A+++++ MPF+P IWGSLL +CR H + LAE AK+L +LEP
Sbjct: 421 CLVDVLGRAGRIKEALEIVKNMPFKPTGSIWGSLLNSCRLHGNVPLAEAVAKRLFELEPN 480
Query: 429 NAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHP 488
NAG Y++LSNIYA+ G + V +R+ M KR + K GCSW++++ K+H F
Sbjct: 481 NAGNYVMLSNIYANAGMWESVKVVREFMEKRGMTKEAGCSWLQIKSKIHTFVAGGSNEFR 540
Query: 489 EHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEG 548
++ +++ + E GY PD+ VLHDV EE + + HSE+LA + L+ G
Sbjct: 541 NSVEYKKVWKRLMEAMEEVGYVPDTGVVLHDVSEEMRAMWVCGHSERLATMFALINTASG 600
Query: 549 VPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
+PIR+ KNLRVC DCHS +K +SKV GR I+LRD NRFHHFKDG+CSC+DYW
Sbjct: 601 MPIRITKNLRVCVDCHSWVKTLSKVTGRVIVLRDTNRFHHFKDGVCSCKDYW 652
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 84/338 (24%), Positives = 144/338 (42%), Gaps = 33/338 (9%)
Query: 9 WTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDV 68
W AM GY G EA L+++M V LG F + L D+ + V
Sbjct: 146 WVAMGIGYSRNGYPKEALLLYYEM-----VCQFGQLGNFAFSMALKACSDLGDLQTGRAV 200
Query: 69 VAQ------------TNMVLG-YCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRI 115
AQ N +L Y +DG DE +FD MP +NV+SW ++I+G V + +
Sbjct: 201 HAQVLKATEDPDQVVNNALLRLYSEDGCFDEALRVFDGMPHRNVVSWNSLIAGLVKKDGV 260
Query: 116 DVARKLFEVMPEKN-EVSWTAMLMGYTQCGRIQ--DAWELFKAMPMKSVVAS-----NSM 167
A + F +M K SW + C R+ + + A+ +KS NS+
Sbjct: 261 FEAIEAFRIMQGKGMGFSWVTLTTILPVCARVTALGSGKEIHAVIVKSTAKPDAPVLNSL 320
Query: 168 ILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNF 227
+ + G + R VF+ M+ KD +W+ +I Y G E ++ F M G +
Sbjct: 321 VDMYAKCGAMDYCRRVFNGMQGKDLTSWNTLITGYAINGRMTEAMESFQEMICSGFSPDG 380
Query: 228 PSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVA--SVLITMYIKCGELVKGKLIF 285
+ I++LS C+ D G ++ ++++ + + V + L+ + + G + + I
Sbjct: 381 ITFIALLSGCSHAGLADDGCRLF-EMMKMDYGISPTVEHYACLVDVLGRAGRIKEALEIV 439
Query: 286 DNFASKDI-VMWNSIISGYAQYG---LGEKSLKVFHEM 319
N K +W S+++ +G L E K E+
Sbjct: 440 KNMPFKPTGSIWGSLLNSCRLHGNVPLAEAVAKRLFEL 477
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 103/218 (47%), Gaps = 18/218 (8%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV----VSWTVMLGGFIRDSRIDDA 56
MP RNVVSW +++ G V++ + EA F M K + V+ T +L R + +
Sbjct: 239 MPHRNVVSWNSLIAGLVKKDGVFEAIEAFRIMQGKGMGFSWVTLTTILPVCARVTALGSG 298
Query: 57 RRLFDMM----PEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+ + ++ + D ++V Y + G +D R +F+ M K++ SW T+I+GY N
Sbjct: 299 KEIHAVIVKSTAKPDAPVLNSLVDMYAKCGAMDYCRRVFNGMQGKDLTSWNTLITGYAIN 358
Query: 113 NRIDVARKLFEVMP----EKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASN--- 165
R+ A + F+ M + +++ A+L G + G D LF+ M M ++
Sbjct: 359 GRMTEAMESFQEMICSGFSPDGITFIALLSGCSHAGLADDGCRLFEMMKMDYGISPTVEH 418
Query: 166 --SMILGLGQNGEVQKARVVFDQMREKDDAT-WSGMIK 200
++ LG+ G +++A + M K + W ++
Sbjct: 419 YACLVDVLGRAGRIKEALEIVKNMPFKPTGSIWGSLLN 456
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 89/182 (48%), Gaps = 13/182 (7%)
Query: 234 LSVCASLASLDHGRQVHAQLV----RCQFDV--DVYVASVLITMYIKCGELVKGKLIFDN 287
L C S +L+HG++++ QL+ RC ++ + + LIT++ C + + + +F++
Sbjct: 75 LHSCISRKALEHGQRLYLQLLLYRDRCNHNLLNNPTLKGKLITLFSVCRRVDEARRVFED 134
Query: 288 FASKDI----VMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGK 343
+D+ +W ++ GY++ G +++L +++EM + L ACS G
Sbjct: 135 -GGEDVDLPESVWVAMGIGYSRNGYPKEALLLYYEMVCQFGQLGNFAFSMALKACSDLGD 193
Query: 344 VKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
++ GR + + K +P ++ L G ++A+++ + MP + + W SL+
Sbjct: 194 LQTGRAVHAQVL-KATEDPDQVVNNALLRLYSEDGCFDEALRVFDGMPHR-NVVSWNSLI 251
Query: 404 GA 405
Sbjct: 252 AG 253
>gi|218526158|sp|Q9M1V3.2|PP296_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g63370
Length = 960
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 233/637 (36%), Positives = 359/637 (56%), Gaps = 59/637 (9%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM----PEKNVVSWTVMLGGFIR------- 49
M +VV+W ++++GYV+ M EA F M + + VS T ++ R
Sbjct: 346 MNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAG 405
Query: 50 ------------DSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKK 97
DS + L DM + ++ C GR F M K
Sbjct: 406 MELHAYVIKHGWDSNLQVGNTLIDMYSKCNLT---------CYMGRA------FLRMHDK 450
Query: 98 NVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAM- 156
++ISWTT+I+GY N+ A +LF + +K M + G I A + K+M
Sbjct: 451 DLISWTTVIAGYAQNDCHVEALELFRDVAKKR------MEIDEMILGSILRASSVLKSML 504
Query: 157 ------------PMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYER 204
+ V N ++ G+ + A VF+ ++ KD +W+ MI
Sbjct: 505 IVKEIHCHILRKGLLDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSAL 564
Query: 205 KGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYV 264
G E E ++LF M + G+ + +L+ +LS ASL++L+ GR++H L+R F ++ +
Sbjct: 565 NGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSI 624
Query: 265 ASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGV 324
A ++ MY CG+L K +FD K ++ + S+I+ Y +G G+ ++++F +M V
Sbjct: 625 AVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENV 684
Query: 325 MPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAM 384
PD ++ + +L ACS+ G + EGR + M+ +Y +EP EHY C+VD+LGRA V +A
Sbjct: 685 SPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAF 744
Query: 385 KLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQG 444
+ ++ M EP A +W +LL ACR+H + ++ E+AA++LL+LEPKN G +L+SN++A QG
Sbjct: 745 EFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQG 804
Query: 445 RFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIG-GL 503
R++DV ++R M+ + K PGCSWIE++ KVH FT RD SHPE I L ++ L
Sbjct: 805 RWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARD-KSHPESKEIYEKLSEVTRKL 863
Query: 504 LREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDC 563
RE GY D+ FVLH+VDE EKV L HSE++A+AYGL++ P+ +R+ KNLRVC DC
Sbjct: 864 EREVGYVADTKFVLHNVDEGEKVQMLHGHSERIAIAYGLLRTPDRACLRITKNLRVCRDC 923
Query: 564 HSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
H+ KL+SK+ R+I++RDANRFHHF+ GLCSC D W
Sbjct: 924 HTFCKLVSKLFRRDIVMRDANRFHHFESGLCSCGDSW 960
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 155/305 (50%), Gaps = 13/305 (4%)
Query: 58 RLFDMMP--EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRI 115
R+F P E D +A +V Y + G +D+ ++FDEMP + +W TMI YV+N
Sbjct: 105 RIFKTFPSFELDFLA-GKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEP 163
Query: 116 DVARKLFEVMPEKNE----VSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVAS----NSM 167
A L+ M + S+ A+L + I+ EL + ++ N++
Sbjct: 164 ASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNAL 223
Query: 168 ILGLGQNGEVQKARVVFDQMREKDDAT-WSGMIKVYERKGYELEVIDLFTLMQKEGVRVN 226
+ +N ++ AR +FD +EK DA W+ ++ Y G LE ++LF M G N
Sbjct: 224 VSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPN 283
Query: 227 FPSLISVLSVCASLASLDHGRQVHAQLVRCQ-FDVDVYVASVLITMYIKCGELVKGKLIF 285
+++S L+ C + G+++HA +++ ++YV + LI MY +CG++ + + I
Sbjct: 284 SYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERIL 343
Query: 286 DNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVK 345
+ D+V WNS+I GY Q + +++L+ F +M ++G D+V++ +++A +
Sbjct: 344 RQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLL 403
Query: 346 EGREI 350
G E+
Sbjct: 404 AGMEL 408
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 131/257 (50%), Gaps = 9/257 (3%)
Query: 152 LFKAMPMKSV-VASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELE 210
+FK P + + ++ G+ G + A VFD+M ++ W+ MI Y G
Sbjct: 106 IFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPAS 165
Query: 211 VIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLIT 270
+ L+ M+ EGV + S ++L CA L + G ++H+ LV+ + ++ + L++
Sbjct: 166 ALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVS 225
Query: 271 MYIKCGELVKGKLIFDNFASK-DIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDV 329
MY K +L + +FD F K D V+WNSI+S Y+ G ++L++F EM +G P+
Sbjct: 226 MYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSY 285
Query: 330 TLVGVLSACSYTGKVKEGREIFES-MKSKYLVEPKTEHYAC--MVDLLGRAGQVEDAMKL 386
T+V L+AC K G+EI S +KS +E Y C ++ + R G++ A ++
Sbjct: 286 TIVSALTACDGFSYAKLGKEIHASVLKSS---THSSELYVCNALIAMYTRCGKMPQAERI 342
Query: 387 IEAMPFEPDAIIWGSLL 403
+ M D + W SL+
Sbjct: 343 LRQMN-NADVVTWNSLI 358
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 102/443 (23%), Positives = 202/443 (45%), Gaps = 52/443 (11%)
Query: 12 MVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDV--- 68
+V Y + G + +A +F +MP++ +W M+G ++ + A L+ M + V
Sbjct: 122 LVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLG 181
Query: 69 VAQTNMVLGYCQDGR-VDEGREIFDEMPKKNVISW----TTMISGYVNNNRIDVARKLFE 123
++ +L C R + G E+ + K S ++S Y N+ + AR+LF+
Sbjct: 182 LSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFD 241
Query: 124 VMPEKNE-VSWTAMLMGYTQCGRIQDAWELFKAMPM------------------------ 158
EK + V W ++L Y+ G+ + ELF+ M M
Sbjct: 242 GFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAK 301
Query: 159 --KSVVAS--------------NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVY 202
K + AS N++I + G++ +A + QM D TW+ +IK Y
Sbjct: 302 LGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGY 361
Query: 203 ERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDV 262
+ E ++ F+ M G + + S+ S+++ L++L G ++HA +++ +D ++
Sbjct: 362 VQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNL 421
Query: 263 YVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSS 322
V + LI MY KC F KD++ W ++I+GYAQ ++L++F ++
Sbjct: 422 QVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKK 481
Query: 323 GVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVED 382
+ D++ L +L A S + +EI + K L++ ++ +VD+ G+ +
Sbjct: 482 RMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDTVIQNE--LVDVYGKCRNMGY 539
Query: 383 AMKLIEAMPFEPDAIIWGSLLGA 405
A ++ E++ + D + W S++ +
Sbjct: 540 ATRVFESIKGK-DVVSWTSMISS 561
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 96/214 (44%), Gaps = 5/214 (2%)
Query: 233 VLSVCASLASLDHGRQVHAQLVRC--QFDVDVYVASVLITMYIKCGELVKGKLIFDNFAS 290
VL +C ++ GRQ+H+++ + F++D ++A L+ MY KCG L + +FD
Sbjct: 86 VLELCGKRRAVSQGRQLHSRIFKTFPSFELD-FLAGKLVFMYGKCGSLDDAEKVFDEMPD 144
Query: 291 KDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREI 350
+ WN++I Y G +L ++ M GV + +L AC+ ++ G E+
Sbjct: 145 RTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSEL 204
Query: 351 FESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHM 410
S+ K +V + + + A +L + + DA++W S+L + T
Sbjct: 205 -HSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSG 263
Query: 411 KLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQG 444
K L + + + + Y ++S + A G
Sbjct: 264 K-SLETLELFREMHMTGPAPNSYTIVSALTACDG 296
>gi|224139038|ref|XP_002326752.1| predicted protein [Populus trichocarpa]
gi|222834074|gb|EEE72551.1| predicted protein [Populus trichocarpa]
Length = 559
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 206/528 (39%), Positives = 318/528 (60%), Gaps = 10/528 (1%)
Query: 82 GRVDEGREIFDEMPKKNVISWTTMISGYVN----NNRIDVARKLFEVMPEKNEVSWTAML 137
G +D IF ++ + + TMI GYVN N + + ++ E E + ++ A+
Sbjct: 33 GSMDYACSIFRQIDQPGTFEFNTMIRGYVNVMNMENALFLYYEMLERGVESDNFTYPALF 92
Query: 138 MGYTQCGRIQDAWEL----FKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDA 193
I++ ++ FK + NS+I G+ G+++ + VF+ M +D A
Sbjct: 93 KACASLRSIEEGMQIHGYIFKRGLEGDLFVQNSLINMYGKCGKIELSCSVFEHMDRRDVA 152
Query: 194 TWSGMIKVYERKGYELEVIDLFTLMQKEG-VRVNFPSLISVLSVCASLASLDHGRQVHAQ 252
+WS +I + G E + +F M +EG R L+SVLS C L +LD GR H
Sbjct: 153 SWSAIIAAHASLGMWSECLSVFGEMSREGSCRPEESILVSVLSACTHLGALDLGRCTHVT 212
Query: 253 LVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKS 312
L+R +++V V + LI MY+KCG + KG +F K+ + ++ +I+G A +G G ++
Sbjct: 213 LLRNIREMNVIVQTSLIDMYVKCGCIEKGLSLFQRMVKKNQLSYSVMITGLAMHGRGMEA 272
Query: 313 LKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVD 372
L+VF +M G+ PDDV +GVLSAC++ G V EG + F MK ++ +EP +HY C+V
Sbjct: 273 LQVFSDMLEEGLKPDDVVYLGVLSACNHAGLVDEGLQCFNRMKLEHGIEPTIQHYGCIVH 332
Query: 373 LLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGP 432
L+GRAG + A++ I +MP +P+ ++W LL AC+ H L++ E+AAK L +L N G
Sbjct: 333 LMGRAGMLNKALEHIRSMPIKPNEVVWRGLLSACKFHHNLEIGEIAAKSLGELNSSNPGD 392
Query: 433 YILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPM 492
Y++LSN+YA R+ DVA++R M ++ + PG S ++VE+K++ F +D +SHP+
Sbjct: 393 YVVLSNMYARAKRWEDVAKIRTEMARKGFTQTPGFSLVQVERKIYKFVSQD-MSHPQCKG 451
Query: 493 IMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIR 552
+ M+ ++ L+ GY PD+S VL DVDEEEK L+ HS+KLA+A+ L+ +G PIR
Sbjct: 452 MYEMIHQMEWQLKFEGYSPDTSQVLFDVDEEEKRQRLKAHSQKLAMAFALIHTSQGAPIR 511
Query: 553 VMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
+ +NLR+C DCH+ KLIS + REI +RD NRFHHFKDG CSCRDYW
Sbjct: 512 IARNLRMCNDCHTYTKLISVIYQREITVRDRNRFHHFKDGTCSCRDYW 559
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 80/401 (19%), Positives = 163/401 (40%), Gaps = 54/401 (13%)
Query: 9 WTAMVRGYVEEGMITEAGTLFWQMPEKNVVS----WTVMLGGFIRDSRIDDARRL----F 60
+ M+RGYV + A L+++M E+ V S + + I++ ++ F
Sbjct: 53 FNTMIRGYVNVMNMENALFLYYEMLERGVESDNFTYPALFKACASLRSIEEGMQIHGYIF 112
Query: 61 DMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARK 120
E D+ Q +++ Y + G+++ +F+ M +++V SW+ +I+ + +
Sbjct: 113 KRGLEGDLFVQNSLINMYGKCGKIELSCSVFEHMDRRDVASWSAIIAAHASLGMWSECLS 172
Query: 121 LFEVM-------PEKN---EVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILG 170
+F M PE++ V +G GR L + + +V+ S+I
Sbjct: 173 VFGEMSREGSCRPEESILVSVLSACTHLGALDLGRCTHV-TLLRNIREMNVIVQTSLIDM 231
Query: 171 LGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSL 230
+ G ++K +F +M +K+ ++S MI G +E + +F+ M +EG++ +
Sbjct: 232 YVKCGCIEKGLSLFQRMVKKNQLSYSVMITGLAMHGRGMEALQVFSDMLEEGLKPDDVVY 291
Query: 231 ISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFAS 290
+ VLS C +D G Q ++ ++
Sbjct: 292 LGVLSACNHAGLVDEGLQCF------------------------------NRMKLEHGIE 321
Query: 291 KDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREI 350
I + I+ + G+ K+L+ M + P++V G+LSAC + ++ G
Sbjct: 322 PTIQHYGCIVHLMGRAGMLNKALEHIRSM---PIKPNEVVWRGLLSACKFHHNLEIGEIA 378
Query: 351 FESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMP 391
+S+ P Y + ++ RA + ED K+ M
Sbjct: 379 AKSLGELNSSNPGD--YVVLSNMYARAKRWEDVAKIRTEMA 417
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 103/220 (46%), Gaps = 23/220 (10%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM-------PEKNVVSWTVMLGGFIRDSRI 53
M R+V SW+A++ + GM +E ++F +M PE++++ +L +
Sbjct: 146 MDRRDVASWSAIIAAHASLGMWSECLSVFGEMSREGSCRPEESIL--VSVLSACTHLGAL 203
Query: 54 DDAR----RLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGY 109
D R L + E +V+ QT+++ Y + G +++G +F M KKN +S++ MI+G
Sbjct: 204 DLGRCTHVTLLRNIREMNVIVQTSLIDMYVKCGCIEKGLSLFQRMVKKNQLSYSVMITGL 263
Query: 110 VNNNRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASN 165
+ R A ++F M E+ ++V + +L G + + + F M ++ +
Sbjct: 264 AMHGRGMEALQVFSDMLEEGLKPDDVVYLGVLSACNHAGLVDEGLQCFNRMKLEHGIEPT 323
Query: 166 SMILG-----LGQNGEVQKARVVFDQMREK-DDATWSGMI 199
G +G+ G + KA M K ++ W G++
Sbjct: 324 IQHYGCIVHLMGRAGMLNKALEHIRSMPIKPNEVVWRGLL 363
>gi|226528958|ref|NP_001141436.1| uncharacterized protein LOC100273546 [Zea mays]
gi|194704572|gb|ACF86370.1| unknown [Zea mays]
gi|414877969|tpg|DAA55100.1| TPA: hypothetical protein ZEAMMB73_905907 [Zea mays]
Length = 700
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 191/464 (41%), Positives = 301/464 (64%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMP 64
NV+SW ++ GY G I +A LF +MPE+NVV+W VML G++ S I++A +LFD MP
Sbjct: 234 NVISWVTLLNGYCRAGRIADARDLFDRMPERNVVAWNVMLDGYVHLSPIEEACKLFDEMP 293
Query: 65 EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEV 124
K+ ++ T ++ G + G++ E +++ D+M V + T ++ GY+ N D AR++F+
Sbjct: 294 IKNSISWTTIISGLARAGKLQEAKDLLDKMSFNCVAAKTALMHGYLQRNMADDARRIFDG 353
Query: 125 MPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVF 184
M + V W M+ GY QCG +++A LF+ MP K +V+ N+MI G Q+G++ KA +F
Sbjct: 354 MEVHDTVCWNTMISGYVQCGILEEAMLLFQRMPNKDMVSWNTMIAGYAQDGQMHKAIGIF 413
Query: 185 DQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLD 244
+M ++ +W+ +I + + ++ + F LM++ R ++ + S L CA+LA L
Sbjct: 414 RRMNRRNTVSWNSVISGFVQNDRFVDALHHFMLMRRGTNRADWSTYASCLRACANLAVLH 473
Query: 245 HGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYA 304
GRQ+H LVR D + + LI+ Y KCG +++ K IFD KDIV WN++I GYA
Sbjct: 474 VGRQLHNLLVRSGHINDSFAGNALISTYAKCGRILEAKQIFDEMVYKDIVSWNALIDGYA 533
Query: 305 QYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKT 364
G G +++ VF EM ++GV PD+VT VG+LSACS+ G + EG F SM +YL++P
Sbjct: 534 SNGQGTEAIAVFREMEANGVRPDEVTFVGILSACSHAGLIDEGLFFFYSMTKEYLLKPVA 593
Query: 365 EHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQ 424
EHYACMVDLLGRAG++ +A +L++ M +P+A +WG+LLGAC H +LA++AA++L +
Sbjct: 594 EHYACMVDLLGRAGKLNEAFELVQGMQIQPNAGVWGALLGACHMHKNHELAQLAAERLSE 653
Query: 425 LEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCS 468
LEP+ A Y+LLSNI A G++ + + R +++++ V KPPG +
Sbjct: 654 LEPRKASNYVLLSNISAEAGKWDESEKARASIKEKGVNKPPGLA 697
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 129/481 (26%), Positives = 222/481 (46%), Gaps = 63/481 (13%)
Query: 17 VEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVL 76
G + A LF MP +N V++ ML R RID+AR LFD MP ++ V+ M+
Sbjct: 29 ARSGQLAAARRLFDAMPLRNTVTYNAMLSALARHGRIDEARALFDGMPGRNTVSWNAMIA 88
Query: 77 GYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMP-EKNEVSWTA 135
GRV + R +FD MP ++ SWT M+S Y +++AR + + MP +K + A
Sbjct: 89 ALSDHGRVADARSLFDRMPVRDEFSWTVMVSCYARGGDLELARDVLDRMPGDKCTACYNA 148
Query: 136 MLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATW 195
M+ GY + GR DA +L + MP +V+ NS + GL Q+GE+ +A FD+M KD +W
Sbjct: 149 MISGYAKNGRFDDAMKLLREMPAPDLVSWNSALAGLTQSGEMVRAVQFFDEM-VKDMTSW 207
Query: 196 SGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVR 255
+ M+ + R G +L F ++ P++IS ++
Sbjct: 208 NLMLAGFVRTG-DLNAASSFF------AKIESPNVISWVT-------------------- 240
Query: 256 CQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKV 315
L+ Y + G + + +FD +++V WN ++ GY E++ K+
Sbjct: 241 ------------LLNGYCRAGRIADARDLFDRMPERNVVAWNVMLDGYVHLSPIEEACKL 288
Query: 316 FHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLG 375
F EM + + ++ ++S + GK++E +++ + M S V KT A M L
Sbjct: 289 FDEM----PIKNSISWTTIISGLARAGKLQEAKDLLDKM-SFNCVAAKT---ALMHGYLQ 340
Query: 376 RAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYIL 435
R +DA ++ + M D + W +++ +++ + E A ++ K+ +
Sbjct: 341 R-NMADDARRIFDGMEVH-DTVCWNTMISG---YVQCGILEEAMLLFQRMPNKDMVSWNT 395
Query: 436 LSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRD-CVSHPEHPMIM 494
+ YA G+ H + + M +RN + SW V + F D V H M+M
Sbjct: 396 MIAGYAQDGQMHKAIGIFRRMNRRNTV-----SWNSV---ISGFVQNDRFVDALHHFMLM 447
Query: 495 R 495
R
Sbjct: 448 R 448
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 158/630 (25%), Positives = 250/630 (39%), Gaps = 146/630 (23%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MP RN V++ AM+ G I EA LF MP +N VSW M+ R+ DAR LF
Sbjct: 44 MPLRNTVTYNAMLSALARHGRIDEARALFDGMPGRNTVSWNAMIAALSDHGRVADARSLF 103
Query: 61 DMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMP-KKNVISWTTMISGYVNNNRIDVAR 119
D MP +D + T MV Y + G ++ R++ D MP K + MISGY N R D A
Sbjct: 104 DRMPVRDEFSWTVMVSCYARGGDLELARDVLDRMPGDKCTACYNAMISGYAKNGRFDDAM 163
Query: 120 KLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQK 179
KL MP + VSW + L G TQ G + A + F M +K + + N M+ G + G++
Sbjct: 164 KLLREMPAPDLVSWNSALAGLTQSGEMVRAVQFFDEM-VKDMTSWNLMLAGFVRTGDLNA 222
Query: 180 ARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGV---------------- 223
A F ++ + +W ++ Y R G + DLF M + V
Sbjct: 223 ASSFFAKIESPNVISWVTLLNGYCRAGRIADARDLFDRMPERNVVAWNVMLDGYVHLSPI 282
Query: 224 --------------RVNFPSLISVLSVCASL------------------ASLDHG--RQV 249
+++ ++IS L+ L +L HG ++
Sbjct: 283 EEACKLFDEMPIKNSISWTTIISGLARAGKLQEAKDLLDKMSFNCVAAKTALMHGYLQRN 342
Query: 250 HAQLVRCQFDV----DVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQ 305
A R FD D + +I+ Y++CG L + L+F +KD+V WN++I+GYAQ
Sbjct: 343 MADDARRIFDGMEVHDTVCWNTMISGYVQCGILEEAMLLFQRMPNKDMVSWNTMIAGYAQ 402
Query: 306 YGLGEKSLKVFHEMFS----------SGVMPDD---------------------VTLVGV 334
G K++ +F M SG + +D T
Sbjct: 403 DGQMHKAIGIFRRMNRRNTVSWNSVISGFVQNDRFVDALHHFMLMRRGTNRADWSTYASC 462
Query: 335 LSAC------------------------SYTG-----------KVKEGREIFESMKSKYL 359
L AC S+ G ++ E ++IF+ M K +
Sbjct: 463 LRACANLAVLHVGRQLHNLLVRSGHINDSFAGNALISTYAKCGRILEAKQIFDEMVYKDI 522
Query: 360 VEPKTEHYACMVDLLGRAGQVEDAMKL---IEAMPFEPDAIIWGSLLGACRTHMKLD--- 413
V + ++D GQ +A+ + +EA PD + + +L AC +D
Sbjct: 523 VS-----WNALIDGYASNGQGTEAIAVFREMEANGVRPDEVTFVGILSACSHAGLIDEGL 577
Query: 414 LAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVE 473
+ K L+P A Y + ++ G+ ++ EL + M+ I+P W +
Sbjct: 578 FFFYSMTKEYLLKPV-AEHYACMVDLLGRAGKLNEAFELVQGMQ----IQPNAGVWGALL 632
Query: 474 KKVHMFTGRDCVSHPEHPMIMRMLEKIGGL 503
HM H H + E++ L
Sbjct: 633 GACHM--------HKNHELAQLAAERLSEL 654
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 96/248 (38%), Gaps = 59/248 (23%)
Query: 269 ITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDD 328
+T + G+L + +FD ++ V +N+++S A++G +++ +F M +
Sbjct: 25 LTRLARSGQLAAARRLFDAMPLRNTVTYNAMLSALARHGRIDEARALFDGMPGR----NT 80
Query: 329 VTLVGVLSACSYTGKVKEGREIFESMK---------------------------SKYLVE 361
V+ +++A S G+V + R +F+ M + +
Sbjct: 81 VSWNAMIAALSDHGRVADARSLFDRMPVRDEFSWTVMVSCYARGGDLELARDVLDRMPGD 140
Query: 362 PKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACR-------------- 407
T Y M+ + G+ +DAMKL+ MP PD + W S L
Sbjct: 141 KCTACYNAMISGYAKNGRFDDAMKLLREMP-APDLVSWNSALAGLTQSGEMVRAVQFFDE 199
Query: 408 -----THMKLDLA--------EVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRK 454
T L LA A+ ++E N ++ L N Y GR D +L
Sbjct: 200 MVKDMTSWNLMLAGFVRTGDLNAASSFFAKIESPNVISWVTLLNGYCRAGRIADARDLFD 259
Query: 455 NMRKRNVI 462
M +RNV+
Sbjct: 260 RMPERNVV 267
>gi|225457243|ref|XP_002281020.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 580
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 214/528 (40%), Positives = 313/528 (59%), Gaps = 9/528 (1%)
Query: 81 DGRVDEGREIFDEMPKKNVISWTTMISGYVNNNR----IDVARKLFEVMPEKNEVSWTAM 136
G V IF N+ W T+I GY ++ I + R +F N ++ +
Sbjct: 54 SGHVAYAHRIFSCTHHPNLFMWNTIIRGYSISDSPITAIALYRDMFLCGISPNSYTFGFV 113
Query: 137 LMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGL----GQNGEVQKARVVFDQMREKDD 192
L + R+ + EL + + ++ GL G + A V+FD+M E D
Sbjct: 114 LKACCKLLRLCEGQELHSQIVKVGLDFETPLVNGLIKLYAACGCMDYACVMFDEMPEPDS 173
Query: 193 ATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQ 252
A+WS M+ Y + G +E + LF MQ E V + +L SV+ VC L +LD G+ VH+
Sbjct: 174 ASWSTMVSGYAQNGQAVEALKLFREMQAENVSSDAFTLASVVGVCGDLGALDLGKWVHSY 233
Query: 253 LVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKS 312
+ + +DV + + L+ MY KCG L +F A +D+ W+++I+GYA +G GEK+
Sbjct: 234 MDKEGVKIDVVLGTALVGMYSKCGSLDNALKVFQGMAERDVTAWSTMIAGYAIHGHGEKA 293
Query: 313 LKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVD 372
L++F M S +P+ VT VLSACS++G V++G +IFE+M ++Y + P+ +HY CMVD
Sbjct: 294 LQLFDAMKRSKTIPNCVTFTSVLSACSHSGLVEKGHQIFETMWTEYKITPQIKHYGCMVD 353
Query: 373 LLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGP 432
L RAG V A K I+ MP EP+ ++W +LLGAC+TH DL E ++K+L+L+P +
Sbjct: 354 LFCRAGMVGHAHKFIQTMPIEPNVVLWRTLLGACKTHGYKDLGEHISRKILKLDPSSPEN 413
Query: 433 YILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPM 492
Y+L+SN+YAS GR+ V ++R M+ + K G S IE+ VH F D SHPE
Sbjct: 414 YVLVSNVYASLGRWSSVCQVRSLMKDKAPKKQHGWSSIEINFMVHKFIMGD-ESHPEREK 472
Query: 493 IMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIR 552
I ML ++ L++ G+ + VLHD+DEEEK ++L HSE+LA+AYGL+ P G PIR
Sbjct: 473 IYGMLHQMARKLKQVGHVNSTVDVLHDIDEEEKEYALGLHSERLAIAYGLLHTPNGSPIR 532
Query: 553 VMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
++KNLRVC DCH IKLIS+V REII+RD RFHHF++ CSC DYW
Sbjct: 533 IVKNLRVCRDCHEVIKLISEVYNREIIVRDRVRFHHFRERGCSCNDYW 580
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 94/385 (24%), Positives = 163/385 (42%), Gaps = 32/385 (8%)
Query: 5 NVVSWTAMVRGY-VEEGMITEAGT---LFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
N+ W ++RGY + + IT +F N ++ +L + R+ + + L
Sbjct: 71 NLFMWNTIIRGYSISDSPITAIALYRDMFLCGISPNSYTFGFVLKACCKLLRLCEGQELH 130
Query: 61 DMMPEKDVVAQTNMVLG----YCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRID 116
+ + + +T +V G Y G +D +FDEMP+ + SW+TM+SGY N +
Sbjct: 131 SQIVKVGLDFETPLVNGLIKLYAACGCMDYACVMFDEMPEPDSASWSTMVSGYAQNGQAV 190
Query: 117 VARKLFEVMPEKNEVSWTAMLMGYTQ-CGRIQDAWELFKAMPMK--------SVVASNSM 167
A KLF M +N S L CG + A +L K + VV ++
Sbjct: 191 EALKLFREMQAENVSSDAFTLASVVGVCGDL-GALDLGKWVHSYMDKEGVKIDVVLGTAL 249
Query: 168 ILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNF 227
+ + G + A VF M E+D WS MI Y G+ + + LF M++ N
Sbjct: 250 VGMYSKCGSLDNALKVFQGMAERDVTAWSTMIAGYAIHGHGEKALQLFDAMKRSKTIPNC 309
Query: 228 PSLISVLSVCASLASLDHGRQVHAQL-VRCQFDVDVYVASVLITMYIKCGELVKG-KLIF 285
+ SVLS C+ ++ G Q+ + + + ++ ++ + G + K I
Sbjct: 310 VTFTSVLSACSHSGLVEKGHQIFETMWTEYKITPQIKHYGCMVDLFCRAGMVGHAHKFIQ 369
Query: 286 DNFASKDIVMWNSIISGYAQYG---LGEK-SLKVFHEMFSSGVMPDDVTLVGVLSACSYT 341
++V+W +++ +G LGE S K+ SS P++ LV + A
Sbjct: 370 TMPIEPNVVLWRTLLGACKTHGYKDLGEHISRKILKLDPSS---PENYVLVSNVYAS--L 424
Query: 342 GKVKEGREIFESMKSKYLVEPKTEH 366
G+ ++ MK K PK +H
Sbjct: 425 GRWSSVCQVRSLMKDK---APKKQH 446
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 86/168 (51%), Gaps = 12/168 (7%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLG---GFIRD-SRIDDA 56
MPE + SW+ MV GY + G EA LF +M +NV S L G D +D
Sbjct: 168 MPEPDSASWSTMVSGYAQNGQAVEALKLFREMQAENVSSDAFTLASVVGVCGDLGALDLG 227
Query: 57 RRLFDMMPEK----DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+ + M ++ DVV T +V Y + G +D ++F M +++V +W+TMI+GY +
Sbjct: 228 KWVHSYMDKEGVKIDVVLGTALVGMYSKCGSLDNALKVFQGMAERDVTAWSTMIAGYAIH 287
Query: 113 NRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAM 156
+ A +LF+ M N V++T++L + G ++ ++F+ M
Sbjct: 288 GHGEKALQLFDAMKRSKTIPNCVTFTSVLSACSHSGLVEKGHQIFETM 335
>gi|449453750|ref|XP_004144619.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
gi|449506934|ref|XP_004162888.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 1067
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 225/643 (34%), Positives = 360/643 (55%), Gaps = 55/643 (8%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDV- 68
++ Y + G I +A +F M K+ V+W M+ G ++ + +A + F M ++
Sbjct: 428 NGLINMYAKCGAINDACVVFRLMDNKDSVTWNSMITGLDQNKQFLEAVKTFQEMRRTELY 487
Query: 69 -------------------------------------VAQTNMVLG-YCQDGRVDEGREI 90
V+ +N +L Y + G V E ++
Sbjct: 488 PSNFTMISALSSCASLGWISVGEQLHCEGLKLGLDLDVSVSNALLALYGECGYVKECQKA 547
Query: 91 FDEMPKKNVISWTTMISGYVNN--NRIDVARKLFEVMP---EKNEVSWTAMLMGYTQCGR 145
F M + +SW ++I ++ + ++ +M + N V++ +L +
Sbjct: 548 FSLMLDYDHVSWNSLIGALADSEPSMLEAVESFLVMMRAGWDPNRVTFITILAAVSSLS- 606
Query: 146 IQDAWELFKAMPMKSVVAS-----NSMILGLGQNGEVQKARVVFDQMREK-DDATWSGMI 199
+ + + A+ +K VA+ N+++ G+ G++ +F +M ++ D+ +W+ MI
Sbjct: 607 LHELGKQIHALVLKRNVAADTAIENALLACYGKCGDMGYCENIFSRMSDRQDEVSWNSMI 666
Query: 200 KVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFD 259
Y + +D+ M ++G R++ + +VLS CA++A+L+ G +VH VR +
Sbjct: 667 SGYIHNELLPKAMDMVWFMMQKGQRLDGFTFATVLSACATVATLERGMEVHGCSVRACLE 726
Query: 260 VDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEM 319
D+ + S L+ MY KCG + F+ ++++ WNS+ISGYA++G G KSL +F +M
Sbjct: 727 SDIVIGSALVDMYAKCGRIDYASRFFEMMPARNLYSWNSMISGYARHGHGTKSLDLFAQM 786
Query: 320 FSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQ 379
G +PD VT VGVLSACS+ G V EG F+SM Y + P+ EH++CMVDLLGR G+
Sbjct: 787 KLQGPLPDHVTFVGVLSACSHAGLVNEGFSHFDSMSEIYGLAPRMEHFSCMVDLLGRVGE 846
Query: 380 VEDAMKLIEAMPFEPDAIIWGSLLGAC--RTHMKLDLAEVAAKKLLQLEPKNAGPYILLS 437
+ + MP +P+ +IW ++LGAC L AA+ LL++EP NA YILLS
Sbjct: 847 LNKMEDFLNQMPVKPNVLIWRTVLGACCRANGRNTALGRRAAEMLLEMEPTNAVNYILLS 906
Query: 438 NIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRML 497
N+YAS G++ DVA+ R MRK V K GCSW+ ++ VH+F D SHPE +I L
Sbjct: 907 NMYASGGKWDDVAKTRVAMRKAFVKKEAGCSWVTMKDGVHVFVAGD-KSHPEKDLIYEKL 965
Query: 498 EKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNL 557
+++ G +R AGY P++ F L+D++ E K L YHSEK+AVA+ L + P +PIR++KNL
Sbjct: 966 KELNGKMRLAGYIPETRFALYDLEGESKEELLSYHSEKIAVAFVLTR-PSKMPIRILKNL 1024
Query: 558 RVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
RVCGDCHSA K IS+++ R+I+LRD+NRFHHF++G CSC D+W
Sbjct: 1025 RVCGDCHSAFKYISQIVERQIVLRDSNRFHHFENGKCSCGDFW 1067
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 109/438 (24%), Positives = 200/438 (45%), Gaps = 39/438 (8%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSR------ID 54
MP RN+VSW+ ++ GY M EA LF +M + G IR + +
Sbjct: 134 MPLRNLVSWSCLISGYTRNRMPNEACELFRKMVSDGFMPNHYAFGSVIRACQECGEYGLK 193
Query: 55 DARRLFDMMPE----KDVVAQTNMVLGYCQD-GRVDEGREIFDEMPKKNVISWTTMISGY 109
++ +M + DV A ++ Y G VD R FD + +N++S +MIS Y
Sbjct: 194 FGMQIHGLMSKTQYVNDVTASNVLISMYGNALGMVDYARRAFDSIWPRNLVSLNSMISVY 253
Query: 110 VNNNRIDVARKLFEVMPEK--------NEVSWTAMLMGYTQCGRIQDAWELF-------- 153
A +F M ++ NE ++ +++ C L
Sbjct: 254 CQRGDAVSAFDIFSTMQKEVMGDGLKPNEYTFGSLISA--TCSLANSGLVLLEQLLTRVE 311
Query: 154 KAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVID 213
K+ + + ++++ G + G + A+ +F +M ++ + +G+I R+ E ++
Sbjct: 312 KSGFLHDLYVGSALVSGFAKAGSIGYAKNIFQKMSYRNVVSLNGLIIGLVRQKRGEEAVE 371
Query: 214 LFTLMQKEGVRVNFPSLISVLSVCASLASLDHGR----QVHAQLVRCQ-FDVDVYVASVL 268
LF M K+ V +N S + +L+ L++G+ +VHA L+R + + + + L
Sbjct: 372 LFMEM-KDSVELNPNSYMIILTAFPEFHVLENGKRKGSEVHAFLIRSGLLNAQIAIGNGL 430
Query: 269 ITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDD 328
I MY KCG + ++F +KD V WNS+I+G Q +++K F EM + + P +
Sbjct: 431 INMYAKCGAINDACVVFRLMDNKDSVTWNSMITGLDQNKQFLEAVKTFQEMRRTELYPSN 490
Query: 329 VTLVGVLSACSYTGKVKEGREIF-ESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLI 387
T++ LS+C+ G + G ++ E +K ++ + ++ L G G V++ K
Sbjct: 491 FTMISALSSCASLGWISVGEQLHCEGLKLGLDLDVSVSN--ALLALYGECGYVKECQKAF 548
Query: 388 EAMPFEPDAIIWGSLLGA 405
M + D + W SL+GA
Sbjct: 549 SLM-LDYDHVSWNSLIGA 565
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 94/367 (25%), Positives = 179/367 (48%), Gaps = 23/367 (6%)
Query: 58 RLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDV 117
+LF D+ ++ Y + G + GR++FDEMP +N++SW+ +ISGY N +
Sbjct: 98 QLFKNGFVNDLFLCNTLINIYARVGDLGSGRKVFDEMPLRNLVSWSCLISGYTRNRMPNE 157
Query: 118 ARKLFEVMPEK----NEVSWTAMLMGYTQCGR------IQDAWELFKAMPMKSVVASNSM 167
A +LF M N ++ +++ +CG +Q + K + V ASN +
Sbjct: 158 ACELFRKMVSDGFMPNHYAFGSVIRACQECGEYGLKFGMQIHGLMSKTQYVNDVTASNVL 217
Query: 168 ILGLGQN-GEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKE----G 222
I G G V AR FD + ++ + + MI VY ++G + D+F+ MQKE G
Sbjct: 218 ISMYGNALGMVDYARRAFDSIWPRNLVSLNSMISVYCQRGDAVSAFDIFSTMQKEVMGDG 277
Query: 223 VRVNFPSLISVLSVCASLAS--LDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVK 280
++ N + S++S SLA+ L Q+ ++ + F D+YV S L++ + K G +
Sbjct: 278 LKPNEYTFGSLISATCSLANSGLVLLEQLLTRVEKSGFLHDLYVGSALVSGFAKAGSIGY 337
Query: 281 GKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSY 340
K IF + +++V N +I G + GE+++++F EM S + + ++ + + +
Sbjct: 338 AKNIFQKMSYRNVVSLNGLIIGLVRQKRGEEAVELFMEMKDSVELNPNSYMIILTAFPEF 397
Query: 341 ----TGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDA 396
GK ++G E+ + L+ + ++++ + G + DA + M D+
Sbjct: 398 HVLENGK-RKGSEVHAFLIRSGLLNAQIAIGNGLINMYAKCGAINDACVVFRLMD-NKDS 455
Query: 397 IIWGSLL 403
+ W S++
Sbjct: 456 VTWNSMI 462
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 103/430 (23%), Positives = 188/430 (43%), Gaps = 34/430 (7%)
Query: 4 RNVVSWTAMVRGYVEEGMITEAGTLFWQM----------PEKNVVSWTVMLGGFIRDSRI 53
RN+VS +M+ Y + G A +F M P + + + +S +
Sbjct: 241 RNLVSLNSMISVYCQRGDAVSAFDIFSTMQKEVMGDGLKPNEYTFGSLISATCSLANSGL 300
Query: 54 DDARRLFDMMPEK----DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGY 109
+L + + D+ + +V G+ + G + + IF +M +NV+S +I G
Sbjct: 301 VLLEQLLTRVEKSGFLHDLYVGSALVSGFAKAGSIGYAKNIFQKMSYRNVVSLNGLIIGL 360
Query: 110 VNNNRIDVARKLFEVMP---EKNEVSWTAMLMGYTQCGRIQD---------AWELFKAMP 157
V R + A +LF M E N S+ +L + + +++ A+ + +
Sbjct: 361 VRQKRGEEAVELFMEMKDSVELNPNSYMIILTAFPEFHVLENGKRKGSEVHAFLIRSGLL 420
Query: 158 MKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTL 217
+ N +I + G + A VVF M KD TW+ MI ++ LE + F
Sbjct: 421 NAQIAIGNGLINMYAKCGAINDACVVFRLMDNKDSVTWNSMITGLDQNKQFLEAVKTFQE 480
Query: 218 MQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGE 277
M++ + + ++IS LS CASL + G Q+H + ++ D+DV V++ L+ +Y +CG
Sbjct: 481 MRRTELYPSNFTMISALSSCASLGWISVGEQLHCEGLKLGLDLDVSVSNALLALYGECGY 540
Query: 278 LVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSL----KVFHEMFSSGVMPDDVTLVG 333
+ + + F D V WNS+I A E S+ + F M +G P+ VT +
Sbjct: 541 VKECQKAFSLMLDYDHVSWNSLIGALAD---SEPSMLEAVESFLVMMRAGWDPNRVTFIT 597
Query: 334 VLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFE 393
+L+A S + G++I ++ K V T ++ G+ G + + M
Sbjct: 598 ILAAVSSLSLHELGKQI-HALVLKRNVAADTAIENALLACYGKCGDMGYCENIFSRMSDR 656
Query: 394 PDAIIWGSLL 403
D + W S++
Sbjct: 657 QDEVSWNSMI 666
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 124/267 (46%), Gaps = 12/267 (4%)
Query: 151 ELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELE 210
+LFK + + N++I + G++ R VFD+M ++ +WS +I Y R E
Sbjct: 98 QLFKNGFVNDLFLCNTLINIYARVGDLGSGRKVFDEMPLRNLVSWSCLISGYTRNRMPNE 157
Query: 211 VIDLFTLMQKEGVRVNFPSLISVLSVCASLA--SLDHGRQVHAQLVRCQFDVDVYVASVL 268
+LF M +G N + SV+ C L G Q+H + + Q+ DV ++VL
Sbjct: 158 ACELFRKMVSDGFMPNHYAFGSVIRACQECGEYGLKFGMQIHGLMSKTQYVNDVTASNVL 217
Query: 269 ITMYIKC-GELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFH----EMFSSG 323
I+MY G + + FD+ +++V NS+IS Y Q G + +F E+ G
Sbjct: 218 ISMYGNALGMVDYARRAFDSIWPRNLVSLNSMISVYCQRGDAVSAFDIFSTMQKEVMGDG 277
Query: 324 VMPDDVTLVGVLSA-CSY--TGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQV 380
+ P++ T ++SA CS +G V + + KS +L + + +V +AG +
Sbjct: 278 LKPNEYTFGSLISATCSLANSGLVLLEQLLTRVEKSGFLHDLYVG--SALVSGFAKAGSI 335
Query: 381 EDAMKLIEAMPFEPDAIIWGSLLGACR 407
A + + M + + G ++G R
Sbjct: 336 GYAKNIFQKMSYRNVVSLNGLIIGLVR 362
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 82/147 (55%), Gaps = 6/147 (4%)
Query: 248 QVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYG 307
++H QL + F D+++ + LI +Y + G+L G+ +FD +++V W+ +ISGY +
Sbjct: 94 ELHLQLFKNGFVNDLFLCNTLINIYARVGDLGSGRKVFDEMPLRNLVSWSCLISGYTRNR 153
Query: 308 LGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGK--VKEGREIFESM-KSKYLVEPKT 364
+ ++ ++F +M S G MP+ V+ AC G+ +K G +I M K++Y+ +
Sbjct: 154 MPNEACELFRKMVSDGFMPNHYAFGSVIRACQECGEYGLKFGMQIHGLMSKTQYVNDVTA 213
Query: 365 EHYACMVDLLGRA-GQVEDAMKLIEAM 390
+ ++ + G A G V+ A + +++
Sbjct: 214 SN--VLISMYGNALGMVDYARRAFDSI 238
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 89/205 (43%), Gaps = 21/205 (10%)
Query: 7 VSWTAMVRGYVEEGMITEAGTLFWQMPEK----------NVVSWTVMLGGFIRDSRIDDA 56
VSW +M+ GY+ ++ +A + W M +K V+S + R +
Sbjct: 660 VSWNSMISGYIHNELLPKAMDMVWFMMQKGQRLDGFTFATVLSACATVATLERGMEVHGC 719
Query: 57 RRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRID 116
E D+V + +V Y + GR+D F+ MP +N+ SW +MISGY +
Sbjct: 720 S--VRACLESDIVIGSALVDMYAKCGRIDYASRFFEMMPARNLYSWNSMISGYARHGHGT 777
Query: 117 VARKLFEVM----PEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVAS-----NSM 167
+ LF M P + V++ +L + G + + + F +M +A + M
Sbjct: 778 KSLDLFAQMKLQGPLPDHVTFVGVLSACSHAGLVNEGFSHFDSMSEIYGLAPRMEHFSCM 837
Query: 168 ILGLGQNGEVQKARVVFDQMREKDD 192
+ LG+ GE+ K +QM K +
Sbjct: 838 VDLLGRVGELNKMEDFLNQMPVKPN 862
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 77/171 (45%), Gaps = 15/171 (8%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM----PEKNVVSWTVMLGGFIRDSRIDDA 56
MP RN+ SW +M+ GY G T++ LF QM P + V++ +L +++
Sbjct: 755 MPARNLYSWNSMISGYARHGHGTKSLDLFAQMKLQGPLPDHVTFVGVLSACSHAGLVNEG 814
Query: 57 RRLFDMMPEKDVVAQ-----TNMVLGYCQDGRVDEGREIFDEMP-KKNVISWTTMISG-- 108
FD M E +A + MV + G +++ + ++MP K NV+ W T++
Sbjct: 815 FSHFDSMSEIYGLAPRMEHFSCMVDLLGRVGELNKMEDFLNQMPVKPNVLIWRTVLGACC 874
Query: 109 YVNNNRIDVARKLFEVMPE---KNEVSWTAMLMGYTQCGRIQDAWELFKAM 156
N + R+ E++ E N V++ + Y G+ D + AM
Sbjct: 875 RANGRNTALGRRAAEMLLEMEPTNAVNYILLSNMYASGGKWDDVAKTRVAM 925
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 44/98 (44%), Gaps = 4/98 (4%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDM 62
E ++V +A+V Y + G I A F MP +N+ SW M+ G+ R + LF
Sbjct: 726 ESDIVIGSALVDMYAKCGRIDYASRFFEMMPARNLYSWNSMISGYARHGHGTKSLDLFAQ 785
Query: 63 M----PEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPK 96
M P D V ++ G V+EG FD M +
Sbjct: 786 MKLQGPLPDHVTFVGVLSACSHAGLVNEGFSHFDSMSE 823
>gi|302763761|ref|XP_002965302.1| hypothetical protein SELMODRAFT_83034 [Selaginella moellendorffii]
gi|300167535|gb|EFJ34140.1| hypothetical protein SELMODRAFT_83034 [Selaginella moellendorffii]
Length = 600
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 207/534 (38%), Positives = 319/534 (59%), Gaps = 13/534 (2%)
Query: 78 YCQDGRVDEGREIFDEMPKKN--VISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTA 135
Y + G + E R +FD++ +KN VISW +I Y N A LF+ M + ++
Sbjct: 69 YGKCGGIAEARSVFDQIQEKNADVISWNGIIGAYTQNGLGKEALHLFKTMDLEGVIANQV 128
Query: 136 MLMGYTQC---------GRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQ 186
L+ GRI A + K + ++V + S++ G+ V AR VFD
Sbjct: 129 TLINAIDACASLPSEEEGRIVHAIAVDKRLESDTMVGT-SLVNMFGKCKNVDAARAVFDS 187
Query: 187 MREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHG 246
+ K+ TW+ M+ VY + + I +F M EGV+ + + ++++ CA+LA+ G
Sbjct: 188 LPRKNLVTWNNMVAVYSQNWQCKKAIQVFRFMDLEGVQPDAVTFLTIIDACAALAAHTEG 247
Query: 247 RQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQY 306
R VH + +DV + + ++ Y KCG L + IFD+ K+ V W++I++ YAQ
Sbjct: 248 RMVHDDITASGIPMDVALGTAVMHFYGKCGRLDNARAIFDSLGKKNTVTWSAILAAYAQN 307
Query: 307 GLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEH 366
G ++++++HEM G+ + +T +G+L ACS+ G+ +G + F SM + V P EH
Sbjct: 308 GYETEAIELYHEMVQGGLEVNGITFLGLLFACSHAGRSMDGVDYFVSMIRDFGVVPVFEH 367
Query: 367 YACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLE 426
Y ++DLLGR+GQ++ + LI +MP+EPD+ W +LLGACR H +D A+ + +L+
Sbjct: 368 YLNLIDLLGRSGQLQLSEDLINSMPYEPDSSAWLALLGACRMHGDVDRGARIAELIYELD 427
Query: 427 PKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVS 486
P+++GPYILLSN+Y+S GR + RK MR R + K PG S IEV+ +VH F +
Sbjct: 428 PEDSGPYILLSNLYSSTGRMDEARRTRKAMRLRGITKQPGLSSIEVKDRVHEFMAAQKL- 486
Query: 487 HPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLP 546
HP+ I +E++ ++EAGY D VL DV+EEEK L YHSE+LA+A+GL+ P
Sbjct: 487 HPQLGRIHAEIERLKARVKEAGYVADVRAVLRDVEEEEKEQLLWYHSERLAIAFGLISTP 546
Query: 547 EGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
G + ++KNLRVC DCH+A+K ISKV+GR+I++RDA RFHHF++G CSC DYW
Sbjct: 547 PGTALHIVKNLRVCFDCHAAVKAISKVVGRKIVVRDAIRFHHFENGACSCGDYW 600
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/244 (31%), Positives = 135/244 (55%), Gaps = 4/244 (1%)
Query: 164 SNSMILGLGQNGEVQKARVVFDQMREK--DDATWSGMIKVYERKGYELEVIDLFTLMQKE 221
+N +I G+ G + +AR VFDQ++EK D +W+G+I Y + G E + LF M E
Sbjct: 62 ANLLIEMYGKCGGIAEARSVFDQIQEKNADVISWNGIIGAYTQNGLGKEALHLFKTMDLE 121
Query: 222 GVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKG 281
GV N +LI+ + CASL S + GR VHA V + + D V + L+ M+ KC +
Sbjct: 122 GVIANQVTLINAIDACASLPSEEEGRIVHAIAVDKRLESDTMVGTSLVNMFGKCKNVDAA 181
Query: 282 KLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYT 341
+ +FD+ K++V WN++++ Y+Q +K+++VF M GV PD VT + ++ AC+
Sbjct: 182 RAVFDSLPRKNLVTWNNMVAVYSQNWQCKKAIQVFRFMDLEGVQPDAVTFLTIIDACAAL 241
Query: 342 GKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGS 401
EGR + + + + + A M G+ G++++A + +++ + + + W +
Sbjct: 242 AAHTEGRMVHDDITASGIPMDVALGTAVM-HFYGKCGRLDNARAIFDSLG-KKNTVTWSA 299
Query: 402 LLGA 405
+L A
Sbjct: 300 ILAA 303
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 92/375 (24%), Positives = 176/375 (46%), Gaps = 31/375 (8%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFI---------RDSRIDD 55
+V+SW ++ Y + G+ EA LF M + V++ V L I + RI
Sbjct: 91 DVISWNGIIGAYTQNGLGKEALHLFKTMDLEGVIANQVTLINAIDACASLPSEEEGRIVH 150
Query: 56 ARRLFDMMPEKDVVAQTNMV--LGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNN 113
A + D E D + T++V G C++ VD R +FD +P+KN+++W M++ Y N
Sbjct: 151 AIAV-DKRLESDTMVGTSLVNMFGKCKN--VDAARAVFDSLPRKNLVTWNNMVAVYSQNW 207
Query: 114 RIDVARKLFEVMP----EKNEVSW------TAMLMGYTQCGRIQDAWELFKAMPMKSVVA 163
+ A ++F M + + V++ A L +T+ GR+ +PM +
Sbjct: 208 QCKKAIQVFRFMDLEGVQPDAVTFLTIIDACAALAAHTE-GRMVHDDITASGIPMDVALG 266
Query: 164 SNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGV 223
+ M G+ G + AR +FD + +K+ TWS ++ Y + GYE E I+L+ M + G+
Sbjct: 267 TAVMHF-YGKCGRLDNARAIFDSLGKKNTVTWSAILAAYAQNGYETEAIELYHEMVQGGL 325
Query: 224 RVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASV-LITMYIKCGELVKGK 282
VN + + +L C+ G ++R V V+ + LI + + G+L +
Sbjct: 326 EVNGITFLGLLFACSHAGRSMDGVDYFVSMIRDFGVVPVFEHYLNLIDLLGRSGQLQLSE 385
Query: 283 LIFDNFASK-DIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSAC-SY 340
+ ++ + D W +++ +G ++ ++ ++ + P+D +LS S
Sbjct: 386 DLINSMPYEPDSSAWLALLGACRMHGDVDRGARIAELIYE--LDPEDSGPYILLSNLYSS 443
Query: 341 TGKVKEGREIFESMK 355
TG++ E R ++M+
Sbjct: 444 TGRMDEARRTRKAMR 458
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 99/183 (54%), Gaps = 4/183 (2%)
Query: 224 RVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKL 283
R + + +L CA +L G++VH+ LV+ + D +A++LI MY KCG + + +
Sbjct: 21 REEISTYVLLLKKCADSKALLEGKRVHSCLVKDGYASDRLIANLLIEMYGKCGGIAEARS 80
Query: 284 IFDNFASK--DIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYT 341
+FD K D++ WN II Y Q GLG+++L +F M GV+ + VTL+ + AC+
Sbjct: 81 VFDQIQEKNADVISWNGIIGAYTQNGLGKEALHLFKTMDLEGVIANQVTLINAIDACASL 140
Query: 342 GKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGS 401
+EGR I ++ +E T +V++ G+ V+ A + +++P + + W +
Sbjct: 141 PSEEEGR-IVHAIAVDKRLESDTMVGTSLVNMFGKCKNVDAARAVFDSLP-RKNLVTWNN 198
Query: 402 LLG 404
++
Sbjct: 199 MVA 201
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 100/217 (46%), Gaps = 18/217 (8%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMP----EKNVVSWTVMLGGFIRDSRIDDA 56
+P +N+V+W MV Y + +A +F M + + V++ ++ + +
Sbjct: 188 LPRKNLVTWNNMVAVYSQNWQCKKAIQVFRFMDLEGVQPDAVTFLTIIDACAALAAHTEG 247
Query: 57 RRLFDMMPEK----DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
R + D + DV T ++ Y + GR+D R IFD + KKN ++W+ +++ Y N
Sbjct: 248 RMVHDDITASGIPMDVALGTAVMHFYGKCGRLDNARAIFDSLGKKNTVTWSAILAAYAQN 307
Query: 113 NRIDVARKLFEVMP----EKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASN--- 165
A +L+ M E N +++ +L + GR D + F +M V
Sbjct: 308 GYETEAIELYHEMVQGGLEVNGITFLGLLFACSHAGRSMDGVDYFVSMIRDFGVVPVFEH 367
Query: 166 --SMILGLGQNGEVQKARVVFDQM-REKDDATWSGMI 199
++I LG++G++Q + + + M E D + W ++
Sbjct: 368 YLNLIDLLGRSGQLQLSEDLINSMPYEPDSSAWLALL 404
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 83/177 (46%), Gaps = 8/177 (4%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDM 62
E + + T++V + + + A +F +P KN+V+W M+ + ++ + A ++F
Sbjct: 159 ESDTMVGTSLVNMFGKCKNVDAARAVFDSLPRKNLVTWNNMVAVYSQNWQCKKAIQVFRF 218
Query: 63 MP----EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKK----NVISWTTMISGYVNNNR 114
M + D V ++ EGR + D++ +V T ++ Y R
Sbjct: 219 MDLEGVQPDAVTFLTIIDACAALAAHTEGRMVHDDITASGIPMDVALGTAVMHFYGKCGR 278
Query: 115 IDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGL 171
+D AR +F+ + +KN V+W+A+L Y Q G +A EL+ M + + LGL
Sbjct: 279 LDNARAIFDSLGKKNTVTWSAILAAYAQNGYETEAIELYHEMVQGGLEVNGITFLGL 335
>gi|356558231|ref|XP_003547411.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 1135
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 234/665 (35%), Positives = 357/665 (53%), Gaps = 75/665 (11%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMM------ 63
A+V Y G + +A LF K++VSW ++ ++ R ++A +M
Sbjct: 472 NALVTMYARLGRVNDAKALFGVFDGKDLVSWNTVISSLSQNDRFEEALMYVYLMIVDGVR 531
Query: 64 PEKDVVAQ----------------------------------TNMVLGYCQDGRVDEGRE 89
P+ +A T +V YC + +GR
Sbjct: 532 PDGVTLASVLPACSQLERLRIGREIHCYALRNGDLIENSFVGTALVDMYCNCKQPKKGRL 591
Query: 90 IFDEMPKKNVISWTTMISGYVNNNRIDVARKLF-EVMPEK----NEVSWTAMLMGYTQCG 144
+FD + ++ V W +++GY N D A +LF E++ E N ++ ++L +C
Sbjct: 592 VFDGVVRRTVAVWNALLAGYARNEFDDQALRLFVEMISESEFCPNATTFASVLPACVRCK 651
Query: 145 RIQDA----WELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIK 200
D + K K N+++ + G V+ ++ +F +M ++D +W+ MI
Sbjct: 652 VFSDKEGIHGYIVKRGFGKDKYVQNALMDMYSRMGRVEISKTIFGRMNKRDIVSWNTMIT 711
Query: 201 VYERKGYELEVIDLFTLMQKE----------------GV--RVNFPSLISVLSVCASLAS 242
G + ++L MQ+ GV + N +L++VL CA+LA+
Sbjct: 712 GCIVCGRYDDALNLLHEMQRRQGEDGSDTFVDYEDDGGVPFKPNSVTLMTVLPGCAALAA 771
Query: 243 LDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISG 302
L G+++HA V+ + +DV V S L+ MY KCG L +FD ++++ WN +I
Sbjct: 772 LGKGKEIHAYAVKQKLAMDVAVGSALVDMYAKCGCLNLASRVFDQMPIRNVITWNVLIMA 831
Query: 303 YAQYGLGEKSLKVFHEMFSSG------VMPDDVTLVGVLSACSYTGKVKEGREIFESMKS 356
Y +G GE++L++F M + G + P++VT + + +ACS++G V EG +F +MK+
Sbjct: 832 YGMHGKGEEALELFRIMTAGGGSNREVIRPNEVTYIAIFAACSHSGMVDEGLHLFHTMKA 891
Query: 357 KYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAI-IWGSLLGACRTHMKLDLA 415
+ VEP+ +HYAC+VDLLGR+G+V++A +LI MP + + W SLLGACR H ++
Sbjct: 892 SHGVEPRGDHYACLVDLLGRSGRVKEAYELINTMPSNLNKVDAWSSLLGACRIHQSVEFG 951
Query: 416 EVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKK 475
E+AAK L LEP A Y+L+SNIY+S G + +RK M++ V K PGCSWIE +
Sbjct: 952 EIAAKHLFVLEPNVASHYVLMSNIYSSAGLWDQALGVRKKMKEMGVRKEPGCSWIEHGDE 1011
Query: 476 VHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEK 535
VH F D SHP+ + LE + +R+ GY PD S VLH+VD+EEK L HSE+
Sbjct: 1012 VHKFLSGD-ASHPQSKELHEYLETLSQRMRKEGYVPDISCVLHNVDDEEKETMLCGHSER 1070
Query: 536 LAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCS 595
LA+A+GL+ P G IRV KNLRVC DCH A K+ISK++ REIILRD RFHHF +G CS
Sbjct: 1071 LAIAFGLLNTPPGTTIRVAKNLRVCNDCHVATKIISKIVDREIILRDVRRFHHFANGTCS 1130
Query: 596 CRDYW 600
C DYW
Sbjct: 1131 CGDYW 1135
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 109/471 (23%), Positives = 200/471 (42%), Gaps = 74/471 (15%)
Query: 60 FDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVAR 119
F P V ++V Y + G + R++FD++P ++ +SW +MI+ +++
Sbjct: 359 FGHAPPSSVAVANSLVNMYGKCGDLTAARQVFDDIPDRDHVSWNSMIATLCRFEEWELSL 418
Query: 120 KLFEVMPEKN--EVSWTAMLMGYTQCGRIQDAWELFKAMPMKSV-------VASNSMILG 170
LF +M +N S+T + + + C ++ L K + ++ +N+++
Sbjct: 419 HLFRLMLSENVDPTSFTLVSVAHA-CSHVRGGVRLGKQVHAYTLRNGDLRTYTNNALVTM 477
Query: 171 LGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSL 230
+ G V A+ +F KD +W+ +I + E + LM +GVR + +L
Sbjct: 478 YARLGRVNDAKALFGVFDGKDLVSWNTVISSLSQNDRFEEALMYVYLMIVDGVRPDGVTL 537
Query: 231 ISVLSVCASLASLDHGRQVHAQLVR-CQFDVDVYVASVLITMYIKCGELVKGKLIFDNFA 289
SVL C+ L L GR++H +R + +V + L+ MY C + KG+L+FD
Sbjct: 538 ASVLPACSQLERLRIGREIHCYALRNGDLIENSFVGTALVDMYCNCKQPKKGRLVFDGVV 597
Query: 290 SKDIVMWNSIISGYAQYGLGEKSLKVFHEMFS-SGVMPDDVTLVGVLSAC---------- 338
+ + +WN++++GYA+ +++L++F EM S S P+ T VL AC
Sbjct: 598 RRTVAVWNALLAGYARNEFDDQALRLFVEMISESEFCPNATTFASVLPACVRCKVFSDKE 657
Query: 339 -------------------------SYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDL 373
S G+V+ + IF M + +V T C+V
Sbjct: 658 GIHGYIVKRGFGKDKYVQNALMDMYSRMGRVEISKTIFGRMNKRDIVSWNTMITGCIV-- 715
Query: 374 LGRAGQVEDAMKLIEAM---------------------PFEPDAIIWGSLLGACRTHMKL 412
G+ +DA+ L+ M PF+P+++ ++L C L
Sbjct: 716 ---CGRYDDALNLLHEMQRRQGEDGSDTFVDYEDDGGVPFKPNSVTLMTVLPGCAALAAL 772
Query: 413 DLA-EVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVI 462
E+ A + Q + L ++YA G + + + M RNVI
Sbjct: 773 GKGKEIHAYAVKQKLAMDVAVGSALVDMYAKCGCLNLASRVFDQMPIRNVI 823
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 108/478 (22%), Positives = 198/478 (41%), Gaps = 71/478 (14%)
Query: 2 PERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFD 61
P +V ++V Y + G +T A +F +P+++ VSW M+ R + + LF
Sbjct: 363 PPSSVAVANSLVNMYGKCGDLTAARQVFDDIPDRDHVSWNSMIATLCRFEEWELSLHLFR 422
Query: 62 MMPEKDV---------------------------------------VAQTNMVLGYCQDG 82
+M ++V +V Y + G
Sbjct: 423 LMLSENVDPTSFTLVSVAHACSHVRGGVRLGKQVHAYTLRNGDLRTYTNNALVTMYARLG 482
Query: 83 RVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVM----PEKNEVSWTAMLM 138
RV++ + +F K+++SW T+IS N+R + A +M + V+ ++L
Sbjct: 483 RVNDAKALFGVFDGKDLVSWNTVISSLSQNDRFEEALMYVYLMIVDGVRPDGVTLASVLP 542
Query: 139 GYTQCGRIQ-----DAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDA 193
+Q R++ + L +++ +++ + +K R+VFD + + A
Sbjct: 543 ACSQLERLRIGREIHCYALRNGDLIENSFVGTALVDMYCNCKQPKKGRLVFDGVVRRTVA 602
Query: 194 TWSGMIKVYERKGYELEVIDLFTLMQKEGVRV-NFPSLISVLSVCASLASLDHGRQVHAQ 252
W+ ++ Y R ++ + + LF M E N + SVL C +H
Sbjct: 603 VWNALLAGYARNEFDDQALRLFVEMISESEFCPNATTFASVLPACVRCKVFSDKEGIHGY 662
Query: 253 LVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKS 312
+V+ F D YV + L+ MY + G + K IF +DIV WN++I+G G + +
Sbjct: 663 IVKRGFGKDKYVQNALMDMYSRMGRVEISKTIFGRMNKRDIVSWNTMITGCIVCGRYDDA 722
Query: 313 LKVFHEMF----------------SSGV--MPDDVTLVGVLSACSYTGKVKEGREIFE-S 353
L + HEM GV P+ VTL+ VL C+ + +G+EI +
Sbjct: 723 LNLLHEMQRRQGEDGSDTFVDYEDDGGVPFKPNSVTLMTVLPGCAALAALGKGKEIHAYA 782
Query: 354 MKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMK 411
+K K ++ + +VD+ + G + A ++ + MP + I W L+ A H K
Sbjct: 783 VKQKLAMDVAVG--SALVDMYAKCGCLNLASRVFDQMPIR-NVITWNVLIMAYGMHGK 837
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 100/194 (51%), Gaps = 9/194 (4%)
Query: 226 NFPSLISVLSVCASLASLDHGRQVHAQLVRCQF--DVDVYVASVLITMYIKCGELVKGKL 283
NF + +VL A++ L G+Q+HA + + V VA+ L+ MY KCG+L +
Sbjct: 330 NF-AFPAVLKAAAAVHDLCLGKQIHAHVFKFGHAPPSSVAVANSLVNMYGKCGDLTAARQ 388
Query: 284 IFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYT-G 342
+FD+ +D V WNS+I+ ++ E SL +F M S V P TLV V ACS+ G
Sbjct: 389 VFDDIPDRDHVSWNSMIATLCRFEEWELSLHLFRLMLSENVDPTSFTLVSVAHACSHVRG 448
Query: 343 KVKEGREIFE-SMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGS 401
V+ G+++ ++++ L +T +V + R G+V DA L + D + W +
Sbjct: 449 GVRLGKQVHAYTLRNGDL---RTYTNNALVTMYARLGRVNDAKALFGVFDGK-DLVSWNT 504
Query: 402 LLGACRTHMKLDLA 415
++ + + + + A
Sbjct: 505 VISSLSQNDRFEEA 518
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 119/285 (41%), Gaps = 43/285 (15%)
Query: 4 RNVVSWTAMVRGYVEEGMITEAGTLFWQMPEK-----NVVSWTVMLGGFIRDSRIDDARR 58
R V W A++ GY +A LF +M + N ++ +L +R D
Sbjct: 599 RTVAVWNALLAGYARNEFDDQALRLFVEMISESEFCPNATTFASVLPACVRCKVFSDKEG 658
Query: 59 LFDMMPE----KDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNR 114
+ + + KD Q ++ Y + GRV+ + IF M K++++SW TMI+G + R
Sbjct: 659 IHGYIVKRGFGKDKYVQNALMDMYSRMGRVEISKTIFGRMNKRDIVSWNTMITGCIVCGR 718
Query: 115 IDVARKLFEVMPEK----------------------NEVSWTAMLMGYTQC-----GRIQ 147
D A L M + N V+ +L G G+
Sbjct: 719 YDDALNLLHEMQRRQGEDGSDTFVDYEDDGGVPFKPNSVTLMTVLPGCAALAALGKGKEI 778
Query: 148 DAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGY 207
A+ + + + M V S +++ + G + A VFDQM ++ TW+ +I Y G
Sbjct: 779 HAYAVKQKLAMDVAVGS-ALVDMYAKCGCLNLASRVFDQMPIRNVITWNVLIMAYGMHGK 837
Query: 208 ELEVIDLFTLM------QKEGVRVNFPSLISVLSVCASLASLDHG 246
E ++LF +M +E +R N + I++ + C+ +D G
Sbjct: 838 GEEALELFRIMTAGGGSNREVIRPNEVTYIAIFAACSHSGMVDEG 882
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 101/243 (41%), Gaps = 45/243 (18%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEK----------------------NVV 38
M +R++VSW M+ G + G +A L +M + N V
Sbjct: 698 MNKRDIVSWNTMITGCIVCGRYDDALNLLHEMQRRQGEDGSDTFVDYEDDGGVPFKPNSV 757
Query: 39 SWTVMLGGFIRDSRIDDARRLFDMMPEK----DVVAQTNMVLGYCQDGRVDEGREIFDEM 94
+ +L G + + + + ++ DV + +V Y + G ++ +FD+M
Sbjct: 758 TLMTVLPGCAALAALGKGKEIHAYAVKQKLAMDVAVGSALVDMYAKCGCLNLASRVFDQM 817
Query: 95 PKKNVISWTTMISGYVNNNRIDVARKLFEVMP----------EKNEVSWTAMLMGYTQCG 144
P +NVI+W +I Y + + + A +LF +M NEV++ A+ + G
Sbjct: 818 PIRNVITWNVLIMAYGMHGKGEEALELFRIMTAGGGSNREVIRPNEVTYIAIFAACSHSG 877
Query: 145 RIQDAWELFKAMPMKSVVASNS-----MILGLGQNGEVQKARVVFDQMR---EKDDATWS 196
+ + LF M V ++ LG++G V++A + + M K DA WS
Sbjct: 878 MVDEGLHLFHTMKASHGVEPRGDHYACLVDLLGRSGRVKEAYELINTMPSNLNKVDA-WS 936
Query: 197 GMI 199
++
Sbjct: 937 SLL 939
>gi|242084152|ref|XP_002442501.1| hypothetical protein SORBIDRAFT_08g020970 [Sorghum bicolor]
gi|241943194|gb|EES16339.1| hypothetical protein SORBIDRAFT_08g020970 [Sorghum bicolor]
Length = 701
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 200/497 (40%), Positives = 303/497 (60%), Gaps = 31/497 (6%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
M E+++VSW M+ G+V G + A + F ++ NVVSW +L G+ R RI DAR LF
Sbjct: 200 MVEKDMVSWNLMLEGFVRAGDLDAAASFFGRIESPNVVSWVTLLNGYCRAGRISDARDLF 259
Query: 61 DMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISG------------ 108
D MPE++VVA M+ GY + R++E ++FDEMP KN ISWTT+ISG
Sbjct: 260 DRMPERNVVACNVMLDGYVRLSRLEEACKLFDEMPGKNSISWTTIISGLARAGKLQEAKD 319
Query: 109 -------------------YVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDA 149
Y+ N ++ AR++F+ M + V W M+ GY Q G +++A
Sbjct: 320 LLDKMSFNCVAAKTALMHGYLQRNMVNDARQIFDGMEVHDTVCWNTMISGYVQRGMLEEA 379
Query: 150 WELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYEL 209
LF+ MP K V+ N+MI G Q G+++KA +F +M K+ +W+ +I + + G +
Sbjct: 380 MLLFQRMPNKDTVSWNTMIAGYAQGGQMRKAIGIFRRMSRKNTVSWNSVISGFVQNGLFV 439
Query: 210 EVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLI 269
+ F LM++ R ++ + S L CA+LA+L GRQ+H+ LVR D++ + LI
Sbjct: 440 DAFHHFMLMRRGTNRADWSTYASCLRACANLAALHVGRQLHSLLVRSGHINDLFARNALI 499
Query: 270 TMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDV 329
+ Y KCG +++ K IFD KDIV WN+++ GYA G G +++ VF EM ++GV PD+V
Sbjct: 500 STYAKCGRMLEAKQIFDEMVGKDIVSWNALVDGYASNGQGTEAISVFREMEANGVRPDEV 559
Query: 330 TLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEA 389
T VG+LSACS G + EG F SM +Y ++P EHYACM DLLGRAG++ +A +L++
Sbjct: 560 TFVGILSACSRAGLIDEGLGFFNSMTEEYSLKPVAEHYACMADLLGRAGKLNEAFELVQG 619
Query: 390 MPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDV 449
M +P+A +WG+LLGAC+ + +LA +AA+KL +LEP A Y+LLSNI A G++ +
Sbjct: 620 MQIQPNAGVWGALLGACQMYKNHELARLAAEKLSELEPCRASNYVLLSNISAEAGKWDEA 679
Query: 450 AELRKNMRKRNVIKPPG 466
+ R +++++ KPPG
Sbjct: 680 EKARASIKEKGANKPPG 696
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 109/389 (28%), Positives = 191/389 (49%), Gaps = 19/389 (4%)
Query: 17 VEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVL 76
G + A LF MP +N V++ ML R RID+AR LFD MP ++ V+ M+
Sbjct: 29 ARSGQLAAARRLFDSMPRRNTVTYNSMLSALARHGRIDEARALFDGMPSRNAVSWNAMIA 88
Query: 77 GYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMP-EKNEVSWTA 135
GRV + R +FD MP ++ SWT M+S Y +++AR + + MP +K + A
Sbjct: 89 ALSDHGRVADARGLFDRMPSRDDFSWTVMVSCYARAGELELARDVLDRMPGDKCTACYNA 148
Query: 136 MLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATW 195
M+ GY + GR DA +L + MP + + NS + GL Q+G++ +A FD+M EKD +W
Sbjct: 149 MISGYAKNGRFDDAVKLLREMPAPDLFSWNSALAGLTQSGQMVRAVQFFDEMVEKDMVSW 208
Query: 196 SGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVR 255
+ M++ + R G F ++ N S +++L+ + R + ++
Sbjct: 209 NLMLEGFVRAGDLDAAASFFGRIESP----NVVSWVTLLNGYCRAGRISDARDLFDRMP- 263
Query: 256 CQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKV 315
+ +V +V++ Y++ L + +FD K+ + W +IISG A+ G +++ +
Sbjct: 264 ---ERNVVACNVMLDGYVRLSRLEEACKLFDEMPGKNSISWTTIISGLARAGKLQEAKDL 320
Query: 316 FHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLG 375
+M + V + G L V + R+IF+ M+ T + M+
Sbjct: 321 LDKMSFNCVAAKTALMHGYLQ----RNMVNDARQIFDGMEVH-----DTVCWNTMISGYV 371
Query: 376 RAGQVEDAMKLIEAMPFEPDAIIWGSLLG 404
+ G +E+AM L + MP D + W +++
Sbjct: 372 QRGMLEEAMLLFQRMP-NKDTVSWNTMIA 399
Score = 174 bits (442), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 106/353 (30%), Positives = 168/353 (47%), Gaps = 44/353 (12%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVM----------------- 43
MP RN VSW AM+ + G + +A LF +MP ++ SWTVM
Sbjct: 75 MPSRNAVSWNAMIAALSDHGRVADARGLFDRMPSRDDFSWTVMVSCYARAGELELARDVL 134
Query: 44 ---------------LGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGR 88
+ G+ ++ R DDA +L MP D+ + + + G Q G++
Sbjct: 135 DRMPGDKCTACYNAMISGYAKNGRFDDAVKLLREMPAPDLFSWNSALAGLTQSGQMVRAV 194
Query: 89 EIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQD 148
+ FDEM +K+++SW M+ G+V +D A F + N VSW +L GY + GRI D
Sbjct: 195 QFFDEMVEKDMVSWNLMLEGFVRAGDLDAAASFFGRIESPNVVSWVTLLNGYCRAGRISD 254
Query: 149 AWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYE 208
A +LF MP ++VVA N M+ G + +++A +FD+M K+ +W+ +I R G
Sbjct: 255 ARDLFDRMPERNVVACNVMLDGYVRLSRLEEACKLFDEMPGKNSISWTTIISGLARAGKL 314
Query: 209 LEVIDLFTLMQKEGVRVNFPSLISVL--SVCASLASLDHGRQVHAQLVRCQFDVDVYVAS 266
E DL M V + L ++ + G +VH D +
Sbjct: 315 QEAKDLLDKMSFNCVAAKTALMHGYLQRNMVNDARQIFDGMEVH----------DTVCWN 364
Query: 267 VLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEM 319
+I+ Y++ G L + L+F +KD V WN++I+GYAQ G K++ +F M
Sbjct: 365 TMISGYVQRGMLEEAMLLFQRMPNKDTVSWNTMIAGYAQGGQMRKAIGIFRRM 417
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 114/385 (29%), Positives = 178/385 (46%), Gaps = 30/385 (7%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MP RN V++ +M+ G I EA LF MP +N VSW M+ R+ DAR LF
Sbjct: 44 MPRRNTVTYNSMLSALARHGRIDEARALFDGMPSRNAVSWNAMIAALSDHGRVADARGLF 103
Query: 61 DMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMP-KKNVISWTTMISGYVNNNRIDVAR 119
D MP +D + T MV Y + G ++ R++ D MP K + MISGY N R D A
Sbjct: 104 DRMPSRDDFSWTVMVSCYARAGELELARDVLDRMPGDKCTACYNAMISGYAKNGRFDDAV 163
Query: 120 KLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQK 179
KL MP + SW + L G TQ G++ A + F M K +V+ N M+ G + G++
Sbjct: 164 KLLREMPAPDLFSWNSALAGLTQSGQMVRAVQFFDEMVEKDMVSWNLMLEGFVRAGDLDA 223
Query: 180 ARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGV---------RVNFPSL 230
A F ++ + +W ++ Y R G + DLF M + V V L
Sbjct: 224 AASFFGRIESPNVVSWVTLLNGYCRAGRISDARDLFDRMPERNVVACNVMLDGYVRLSRL 283
Query: 231 ---------------ISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKC 275
IS ++ + LA ++ L + F+ V + L+ Y++
Sbjct: 284 EEACKLFDEMPGKNSISWTTIISGLARAGKLQEAKDLLDKMSFNC-VAAKTALMHGYLQR 342
Query: 276 GELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVL 335
+ + IFD D V WN++ISGY Q G+ E+++ +F M + D V+ ++
Sbjct: 343 NMVNDARQIFDGMEVHDTVCWNTMISGYVQRGMLEEAMLLFQRMPN----KDTVSWNTMI 398
Query: 336 SACSYTGKVKEGREIFESMKSKYLV 360
+ + G++++ IF M K V
Sbjct: 399 AGYAQGGQMRKAIGIFRRMSRKNTV 423
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 141/560 (25%), Positives = 245/560 (43%), Gaps = 74/560 (13%)
Query: 1 MP-ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRL 59
MP ++ + AM+ GY + G +A L +MP ++ SW L G + ++ A +
Sbjct: 137 MPGDKCTACYNAMISGYAKNGRFDDAVKLLREMPAPDLFSWNSALAGLTQSGQMVRAVQF 196
Query: 60 FDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVAR 119
FD M EKD+V+ M+ G+ + G +D F + NV+SW T+++GY RI AR
Sbjct: 197 FDEMVEKDMVSWNLMLEGFVRAGDLDAAASFFGRIESPNVVSWVTLLNGYCRAGRISDAR 256
Query: 120 KLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQK 179
LF+ MPE+N V+ ML GY + R+++A +LF MP K+ ++ ++I GL + G++Q+
Sbjct: 257 DLFDRMPERNVVACNVMLDGYVRLSRLEEACKLFDEMPGKNSISWTTIISGLARAGKLQE 316
Query: 180 ARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCAS 239
A+ + D+M A + ++ Y ++ + +F M+ V + ++IS
Sbjct: 317 AKDLLDKMSFNCVAAKTALMHGYLQRNMVNDARQIFDGMEVHDT-VCWNTMIS------- 368
Query: 240 LASLDHGRQVHAQLVRCQF-DVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNS 298
+ G A L+ + + D + +I Y + G++ K IF + K+ V WNS
Sbjct: 369 -GYVQRGMLEEAMLLFQRMPNKDTVSWNTMIAGYAQGGQMRKAIGIFRRMSRKNTVSWNS 427
Query: 299 IISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSY------------------ 340
+ISG+ Q GL + F M D T L AC+
Sbjct: 428 VISGFVQNGLFVDAFHHFMLMRRGTNRADWSTYASCLRACANLAALHVGRQLHSLLVRSG 487
Query: 341 -----------------TGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDA 383
G++ E ++IF+ M K +V + +VD GQ +A
Sbjct: 488 HINDLFARNALISTYAKCGRMLEAKQIFDEMVGKDIVS-----WNALVDGYASNGQGTEA 542
Query: 384 MKL---IEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQ---LEPKNAGPYILLS 437
+ + +EA PD + + +L AC +D + + L+P A Y ++
Sbjct: 543 ISVFREMEANGVRPDEVTFVGILSACSRAGLIDEGLGFFNSMTEEYSLKPV-AEHYACMA 601
Query: 438 NIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRML 497
++ G+ ++ EL + M+ I+P W + M+ H +
Sbjct: 602 DLLGRAGKLNEAFELVQGMQ----IQPNAGVWGALLGACQMY--------KNHELARLAA 649
Query: 498 EKIGGLLREAGYCPDSSFVL 517
EK L E C S++VL
Sbjct: 650 EK----LSELEPCRASNYVL 665
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 103/256 (40%), Gaps = 60/256 (23%)
Query: 262 VYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFS 321
V+ ++ +T + G+L + +FD+ ++ V +NS++S A++G +++ +F M S
Sbjct: 18 VFRSNQELTRLARSGQLAAARRLFDSMPRRNTVTYNSMLSALARHGRIDEARALFDGMPS 77
Query: 322 SGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSK----YLV----------------- 360
V+ +++A S G+V + R +F+ M S+ + V
Sbjct: 78 RNA----VSWNAMIAALSDHGRVADARGLFDRMPSRDDFSWTVMVSCYARAGELELARDV 133
Query: 361 ------EPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDL 414
+ T Y M+ + G+ +DA+KL+ MP PD W S L ++
Sbjct: 134 LDRMPGDKCTACYNAMISGYAKNGRFDDAVKLLREMP-APDLFSWNSALAGLTQSGQMVR 192
Query: 415 A----------------------------EVAAKKLLQLEPKNAGPYILLSNIYASQGRF 446
A + AA ++E N ++ L N Y GR
Sbjct: 193 AVQFFDEMVEKDMVSWNLMLEGFVRAGDLDAAASFFGRIESPNVVSWVTLLNGYCRAGRI 252
Query: 447 HDVAELRKNMRKRNVI 462
D +L M +RNV+
Sbjct: 253 SDARDLFDRMPERNVV 268
>gi|302758642|ref|XP_002962744.1| hypothetical protein SELMODRAFT_78092 [Selaginella moellendorffii]
gi|300169605|gb|EFJ36207.1| hypothetical protein SELMODRAFT_78092 [Selaginella moellendorffii]
Length = 935
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 220/626 (35%), Positives = 349/626 (55%), Gaps = 31/626 (4%)
Query: 2 PERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFD 61
P ++V+ +AM+ + G E+ LF+ M + V L + +
Sbjct: 314 PSTSLVTCSAMISACWQNGWPQESLRLFFAMNLEGTKPSGVTLVSVLNACSMLQVGSATA 373
Query: 62 MMPE---------KDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+ E +D V T ++ Y + + R FD + +V+SW M + Y+ +
Sbjct: 374 FVLEQAMEVVSATRDNVLGTTLLTTYARSNDLPRARATFDAIQSPDVVSWNAMAAAYLQH 433
Query: 113 NRIDVARKLFEVMP-EKNEVSWTAMLMGYTQCG------------RIQDAWELFKAMPMK 159
+R A LFE M E S + T C RIQ E +A
Sbjct: 434 HRSREALVLFERMLLEGVRPSVATFITALTACAAYPPQTASAIGKRIQSLLE--EAGLEG 491
Query: 160 SVVASNSMILGLGQNGEVQKARVVFDQMR--EKDDATWSGMIKVYERKGYELEVIDLFTL 217
+N+ + + G + AR VF+++ +D TW+ M+ Y G E +LF
Sbjct: 492 DTAVANATLNMYAKCGSLADARAVFERISPARRDCITWNSMLAAYGHHGLGKEAFELFQA 551
Query: 218 MQKEG-VRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCG 276
M+ E V+ N + ++VL S S+ GR++HA++V F+ D + + L+ MY KCG
Sbjct: 552 MEAEKLVKPNKVTFVAVLDASTSRTSIAQGREIHARVVSNGFESDTVIQNALLNMYAKCG 611
Query: 277 ELVKGKLIFDNFAS--KDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGV 334
L + IFD +S +D++ W S+I+GYAQYG E++LK+F M GV P+ VT +
Sbjct: 612 SLDDAQAIFDKSSSNQEDVIAWTSLIAGYAQYGQAERALKLFWTMQQQGVRPNHVTFISA 671
Query: 335 LSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEP 394
L+AC++ GK+++G E+ M + + P ++H++C+VDLLGR G++++A KL+E +
Sbjct: 672 LTACNHGGKLEQGCELLSGMTPDHGILPASKHFSCIVDLLGRCGRLDEAEKLLERTS-QA 730
Query: 395 DAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRK 454
D I W +LL AC+ +L+ E A++++QL+P+ A YI+L+++YA+ GR+++ A +RK
Sbjct: 731 DVITWMALLDACKNSKELERGERCAERIMQLDPEVASSYIVLASMYAAAGRWNEAATIRK 790
Query: 455 NMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSS 514
M + + PGCS +EV +++H F+ D SHP+ I LE++ ++ AGY D+
Sbjct: 791 TMLDKGIRADPGCSAVEVNQELHSFSAGD-KSHPKSEEIYLELERLHWSIKAAGYVADTG 849
Query: 515 FVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVM 574
VLHDV +E K L HSEKLA+A+GL+ P G P+RV+KNLRVC DCH+A KLISKV
Sbjct: 850 LVLHDVSQEHKERLLMRHSEKLAIAFGLMSTPSGSPLRVIKNLRVCSDCHTATKLISKVT 909
Query: 575 GREIILRDANRFHHFKDGLCSCRDYW 600
GR+I++RD++R+HHF G CSC DYW
Sbjct: 910 GRDILMRDSSRYHHFTSGTCSCGDYW 935
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 126/497 (25%), Positives = 229/497 (46%), Gaps = 39/497 (7%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQM-----PEKNVVSWTVMLGGFIRDS--RIDD 55
+R+VV+W AM+ ++ G EA LF M P N V++ +L + ++D
Sbjct: 207 KRDVVTWNAMISAFLRNGSAREALQLFRDMDRDGAPPPNSVTFVSVLDSCVEAGLLSLED 266
Query: 56 AR----RLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIF----DEMPKKNVISWTTMIS 107
R R+ E++ +T +V Y + G +D+ E+F DE P ++++ + MIS
Sbjct: 267 VRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKGDEEPSTSLVTCSAMIS 326
Query: 108 GYVNNNRIDVARKLFEVMP-EKNEVSWTAMLMGYTQCGRIQ----DAWELFKAMPMKSVV 162
N + +LF M E + S ++ C +Q A+ L +AM + S
Sbjct: 327 ACWQNGWPQESLRLFFAMNLEGTKPSGVTLVSVLNACSMLQVGSATAFVLEQAMEVVSAT 386
Query: 163 ASN----SMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLM 218
N +++ ++ ++ +AR FD ++ D +W+ M Y + E + LF M
Sbjct: 387 RDNVLGTTLLTTYARSNDLPRARATFDAIQSPDVVSWNAMAAAYLQHHRSREALVLFERM 446
Query: 219 QKEGVRVNFPSLISVLSVCASL---ASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKC 275
EGVR + + I+ L+ CA+ + G+++ + L + D VA+ + MY KC
Sbjct: 447 LLEGVRPSVATFITALTACAAYPPQTASAIGKRIQSLLEEAGLEGDTAVANATLNMYAKC 506
Query: 276 GELVKGKLIFDNF--ASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSG-VMPDDVTLV 332
G L + +F+ A +D + WNS+++ Y +GLG+++ ++F M + V P+ VT V
Sbjct: 507 GSLADARAVFERISPARRDCITWNSMLAAYGHHGLGKEAFELFQAMEAEKLVKPNKVTFV 566
Query: 333 GVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIE-AMP 391
VL A + + +GREI + S E T ++++ + G ++DA + + +
Sbjct: 567 AVLDASTSRTSIAQGREIHARVVSNGF-ESDTVIQNALLNMYAKCGSLDDAQAIFDKSSS 625
Query: 392 FEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGP--YILLSNIYASQ--GRFH 447
+ D I W SL+ + + AE A K ++ + P +S + A G+
Sbjct: 626 NQEDVIAWTSLIAG---YAQYGQAERALKLFWTMQQQGVRPNHVTFISALTACNHGGKLE 682
Query: 448 DVAELRKNMRKRNVIKP 464
EL M + I P
Sbjct: 683 QGCELLSGMTPDHGILP 699
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 113/439 (25%), Positives = 202/439 (46%), Gaps = 41/439 (9%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQMPEK-NVVSWTVMLGGFIRDSRIDDARRLFDMM 63
+V S TAM+R ++E G +A LF +M + N + ++ + RR+ +
Sbjct: 108 SVYSCTAMIRAWMEHGRPDKAMELFDRMEVRPNCHALIALVNACSCLGNLAAGRRIHSQI 167
Query: 64 PEKDVVAQTNMVLG------YCQDGRVDEGREIFDEMP---KKNVISWTTMISGYVNNNR 114
++D + N VLG Y + G + + ++ FD +P K++V++W MIS ++ N
Sbjct: 168 SDRDF--EENSVLGNALISMYSKCGSLIDAKQAFDRLPRASKRDVVTWNAMISAFLRNGS 225
Query: 115 IDVARKLFEVM-----PEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVAS----- 164
A +LF M P N V++ ++L + G + + E +A+ + V A
Sbjct: 226 AREALQLFRDMDRDGAPPPNSVTFVSVLDSCVEAGLL--SLEDVRAIHGRIVGAGIEREA 283
Query: 165 ---NSMILGLGQNGEVQKARVVFDQMREKDD------ATWSGMIKVYERKGYELEVIDLF 215
+++ G+ G + A VF +R+ D+ T S MI + G+ E + LF
Sbjct: 284 FVRTALVDSYGKLGSLDDAWEVF--LRKGDEEPSTSLVTCSAMISACWQNGWPQESLRLF 341
Query: 216 TLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVR-CQFDVDVYVASVLITMYIK 274
M EG + + +L+SVL+ C+ L V Q + D + + L+T Y +
Sbjct: 342 FAMNLEGTKPSGVTLVSVLNACSMLQVGSATAFVLEQAMEVVSATRDNVLGTTLLTTYAR 401
Query: 275 CGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGV 334
+L + + FD S D+V WN++ + Y Q+ ++L +F M GV P T +
Sbjct: 402 SNDLPRARATFDAIQSPDVVSWNAMAAAYLQHHRSREALVLFERMLLEGVRPSVATFITA 461
Query: 335 LSAC-SYTGKVKE--GREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAM- 390
L+AC +Y + G+ I +S+ + +E T +++ + G + DA + E +
Sbjct: 462 LTACAAYPPQTASAIGKRI-QSLLEEAGLEGDTAVANATLNMYAKCGSLADARAVFERIS 520
Query: 391 PFEPDAIIWGSLLGACRTH 409
P D I W S+L A H
Sbjct: 521 PARRDCITWNSMLAAYGHH 539
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 96/375 (25%), Positives = 162/375 (43%), Gaps = 55/375 (14%)
Query: 68 VVAQTNMVLGYCQDGRVDEGREIFDEMP-KKNVISWTTMISGYVNNNRIDVARKLFEVMP 126
V + T M+ + + GR D+ E+FD M + N + +++ + R++ +
Sbjct: 109 VYSCTAMIRAWMEHGRPDKAMELFDRMEVRPNCHALIALVNACSCLGNLAAGRRIHSQIS 168
Query: 127 ----EKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARV 182
E+N V A++ Y++CG + DA + F +P S
Sbjct: 169 DRDFEENSVLGNALISMYSKCGSLIDAKQAFDRLPRAS---------------------- 206
Query: 183 VFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRV-NFPSLISVLSVC--AS 239
++D TW+ MI + R G E + LF M ++G N + +SVL C A
Sbjct: 207 ------KRDVVTWNAMISAFLRNGSAREALQLFRDMDRDGAPPPNSVTFVSVLDSCVEAG 260
Query: 240 LASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIF----DNFASKDIVM 295
L SL+ R +H ++V + + +V + L+ Y K G L +F D S +V
Sbjct: 261 LLSLEDVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKGDEEPSTSLVT 320
Query: 296 WNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACS--YTGK-----VKEGR 348
+++IS Q G ++SL++F M G P VTLV VL+ACS G +++
Sbjct: 321 CSAMISACWQNGWPQESLRLFFAMNLEGTKPSGVTLVSVLNACSMLQVGSATAFVLEQAM 380
Query: 349 EIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRT 408
E+ + + L YA D L RA DA++ PD + W ++ A
Sbjct: 381 EVVSATRDNVLGTTLLTTYARSND-LPRARATFDAIQ-------SPDVVSWNAMAAAYLQ 432
Query: 409 HMKLDLAEVAAKKLL 423
H + A V +++L
Sbjct: 433 HHRSREALVLFERML 447
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 121/235 (51%), Gaps = 23/235 (9%)
Query: 160 SVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQ 219
S +AS+ +I+ + G + +A + D+ T MI+ + G + ++LF M+
Sbjct: 80 SFLASD-LIVMHAKCGNLAEAEALADRFASVYSCT--AMIRAWMEHGRPDKAMELFDRME 136
Query: 220 KEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELV 279
VR N +LI++++ C+ L +L GR++H+Q+ F+ + + + LI+MY KCG L+
Sbjct: 137 ---VRPNCHALIALVNACSCLGNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLI 193
Query: 280 KGKLIFDNF---ASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGV-MPDDVTLVGVL 335
K FD + +D+V WN++IS + + G ++L++F +M G P+ VT V VL
Sbjct: 194 DAKQAFDRLPRASKRDVVTWNAMISAFLRNGSAREALQLFRDMDRDGAPPPNSVTFVSVL 253
Query: 336 SACSYTG-------KVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDA 383
+C G + GR + ++ + V +VD G+ G ++DA
Sbjct: 254 DSCVEAGLLSLEDVRAIHGRIVGAGIEREAFVRTA------LVDSYGKLGSLDDA 302
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 92/177 (51%), Gaps = 10/177 (5%)
Query: 233 VLSVCASLASLDHGRQVHAQLVRCQFDVD--VYVASVLITMYIKCGELVKGKLIFDNFAS 290
+L C L +L G+++HA ++ + D+ ++AS LI M+ KCG L + + + D FAS
Sbjct: 49 LLQACGRLRALKQGQRLHAHILSRRIDLHNHSFLASDLIVMHAKCGNLAEAEALADRFAS 108
Query: 291 KDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREI 350
+ ++I + ++G +K++++F M V P+ L+ +++ACS G + GR I
Sbjct: 109 --VYSCTAMIRAWMEHGRPDKAMELFDRM---EVRPNCHALIALVNACSCLGNLAAGRRI 163
Query: 351 FESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMP--FEPDAIIWGSLLGA 405
+ + E A ++ + + G + DA + + +P + D + W +++ A
Sbjct: 164 HSQISDRDFEENSVLGNA-LISMYSKCGSLIDAKQAFDRLPRASKRDVVTWNAMISA 219
>gi|124360536|gb|ABN08546.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 1083
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 217/617 (35%), Positives = 356/617 (57%), Gaps = 25/617 (4%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFI-----RDSRIDD 55
MP ++V SW AM+ G+ + G A + +M + V T+ + + D I+
Sbjct: 182 MPVKDVGSWNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVING 241
Query: 56 ARRLFDMMP---EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
++ + DV ++ Y + GR+ + + +FD+M ++++SW ++I+ Y N
Sbjct: 242 VLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQN 301
Query: 113 NRIDVARKLFEVM------PEK-NEVSWTAML--MGYTQCGRIQDAWELFKAMPMKSVVA 163
N A + F+ M P+ VS T++ + + R + + + K VV
Sbjct: 302 NDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVI 361
Query: 164 SNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGV 223
N+++ + G + A VFDQ+ KD +W+ ++ Y + G E ID + +M E
Sbjct: 362 GNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMM--EEC 419
Query: 224 RVNFP---SLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVK 280
R P + +S++ + + +L G ++HA+L++ +DV+VA+ LI +Y KCG L
Sbjct: 420 RDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLED 479
Query: 281 GKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSY 340
+F V WN+II+ +G GE++L++F +M + V D +T V +LSACS+
Sbjct: 480 AMSLFYEIPRDTSVPWNAIIASLGIHGRGEEALQLFKDMLAERVKADHITFVSLLSACSH 539
Query: 341 TGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWG 400
+G V EG++ F+ M+ +Y ++P +HY CMVDLLGRAG +E A +L+ MP +PDA IWG
Sbjct: 540 SGLVDEGQKCFDIMQKEYGIKPSLKHYGCMVDLLGRAGYLEKAYELVRNMPIQPDASIWG 599
Query: 401 SLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRN 460
+LL AC+ + +L +A+ +LL+++ +N G Y+LLSNIYA+ ++ V ++R R R
Sbjct: 600 ALLSACKIYGNAELGTLASDRLLEVDSENVGYYVLLSNIYANTEKWEGVIKVRSLARDRG 659
Query: 461 VIKPPGCSWIEVEKKVHMF-TGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHD 519
+ K PG S + V K +F TG +HP++ I + L+ + ++ GY PD SFV D
Sbjct: 660 LRKTPGWSSVVVGSKAEVFYTGNQ--THPKYTEIYKELKVLSAKMKSLGYVPDYSFVYQD 717
Query: 520 VDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREII 579
++E+EK L HSE+LA+A+G++ P PIR+ KNLRVCGDCH+A K IS++ REI+
Sbjct: 718 IEEDEKEQILNSHSERLAIAFGIISTPPRSPIRIFKNLRVCGDCHNATKYISRISEREIV 777
Query: 580 LRDANRFHHFKDGLCSC 596
+RD+NRFHHFKDG+CSC
Sbjct: 778 VRDSNRFHHFKDGICSC 794
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 111/459 (24%), Positives = 210/459 (45%), Gaps = 56/459 (12%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARR---- 58
+N+V T ++ YV G I+ + + F + +KN+ SW ++ ++R + +A
Sbjct: 51 SQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSWNSIISAYVRFGKYHEAMNCVNQ 110
Query: 59 ------------------------------------LFDMMPEKDVVAQTNMVLGYCQDG 82
+F M E DV ++V Y + G
Sbjct: 111 LFSMCGGGHLRPDFYTFPPILKACVSLVDGKKVHCCVFKMGFEDDVFVAASLVHLYSRYG 170
Query: 83 RVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMP----EKNEVSWTAMLM 138
+D ++F +MP K+V SW MISG+ N A + M + + ++ ++L
Sbjct: 171 VLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVASILP 230
Query: 139 GYTQCGRIQDA----WELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDAT 194
Q + + + K V SN++I + G +Q A++VFDQM +D +
Sbjct: 231 VCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVS 290
Query: 195 WSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLV 254
W+ +I YE+ + F MQ G+R + +++S+ S+ + L+ R + ++
Sbjct: 291 WNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVI 350
Query: 255 RCQ-FDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSL 313
R + D DV + + L+ MY K G + +FD KD + WN++++GY Q GL +++
Sbjct: 351 RREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAI 410
Query: 314 KVFHEMFSS-GVMPDDVTLVGVLSACSYTGKVKEGREIFESM--KSKYLVEPKTEHYACM 370
++ M +P+ T V ++ A S+ G +++G +I + S YL C+
Sbjct: 411 DAYNMMEECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYL---DVFVATCL 467
Query: 371 VDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTH 409
+DL G+ G++EDAM L +P + ++ W +++ + H
Sbjct: 468 IDLYGKCGRLEDAMSLFYEIPRDT-SVPWNAIIASLGIH 505
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 86/175 (49%), Gaps = 10/175 (5%)
Query: 239 SLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNS 298
S +++ +++HA L+ ++ +++ LI +Y+ G++ + FD K+I WNS
Sbjct: 31 SCVNVNATKKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSWNS 90
Query: 299 IISGYAQYGLGEKSLKVFHEMFS----SGVMPDDVTLVGVLSACSYTGKVKEGREIFESM 354
IIS Y ++G +++ +++FS + PD T +L AC + +G+++
Sbjct: 91 IISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACV---SLVDGKKV-HCC 146
Query: 355 KSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL-GACRT 408
K E A +V L R G ++ A K+ MP + D W +++ G C+
Sbjct: 147 VFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVK-DVGSWNAMISGFCQN 200
>gi|225447043|ref|XP_002269269.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 640
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 207/473 (43%), Positives = 298/473 (63%), Gaps = 2/473 (0%)
Query: 129 NEVSWTAMLMG-YTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQM 187
+EVS + L+ Y CG I+ A +F P + N MI G + G + AR +F+ M
Sbjct: 169 SEVSVSNFLVQMYASCGLIESAGLVFDRTPECDGASWNIMIGGYLKCGVFKSARRMFEAM 228
Query: 188 REKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGR 247
++D +WS MI Y ++ E + LF M E + N L++ LS CA L +++ G+
Sbjct: 229 PDRDVVSWSVMINGYVQESRFKEGLGLFQDMMGEKIEPNESVLVNALSACAHLGAMEQGQ 288
Query: 248 QVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYG 307
+ + R + V + + LI MY KCG + + +F K+++ W+++I+G A G
Sbjct: 289 WIERYMERKNVRLTVRLGTALIDMYSKCGSVERALEVFHKMKEKNVLAWSAMINGLAING 348
Query: 308 LGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHY 367
G+ +L +F +M GV P++VT +G+L+ACS++ V EG F SM S Y ++P H+
Sbjct: 349 QGKDALNLFSQMEMQGVKPNEVTFIGILNACSHSKLVDEGCSFFHSMTSIYGLKPNAHHH 408
Query: 368 ACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEP 427
CMVDL GRAG ++ A +I++MPF+P++ IWG+LL ACR H +L E K+LL+L+P
Sbjct: 409 CCMVDLYGRAGMLDQAQTVIKSMPFKPNSAIWGALLNACRIHGDTELGEQVGKRLLELDP 468
Query: 428 KNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSH 487
+ G Y+LLSNIYA+ GR+ VAELR+ MR+R V K PGCS+I++ +H F D SH
Sbjct: 469 NHGGRYVLLSNIYAACGRWDRVAELRRMMRERQVSKTPGCSFIDLGDTIHEFVAGDS-SH 527
Query: 488 PEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPE 547
P+ MI L ++ L+ AGY PD+ VL D+DEEEK +L +HSEKLA+A+GL+K
Sbjct: 528 PQLEMIYAKLGEMSQELKAAGYKPDTGQVLLDMDEEEKETALCHHSEKLAIAFGLIKTDP 587
Query: 548 GVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
G IR+ KNLRVC DCHSA KLISK+ REII+RD RFHHF+DG CSC D+W
Sbjct: 588 GTTIRITKNLRVCADCHSATKLISKIYNREIIVRDRCRFHHFRDGSCSCMDFW 640
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/358 (24%), Positives = 167/358 (46%), Gaps = 57/358 (15%)
Query: 12 MVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQ 71
+V+ Y G+I AG +F + PE + SW +M+GG+++ ARR+F+ MP++DVV+
Sbjct: 177 LVQMYASCGLIESAGLVFDRTPECDGASWNIMIGGYLKCGVFKSARRMFEAMPDRDVVSW 236
Query: 72 TNMVLGYCQDGRVDEGREIFDEM------PKKNVISWTTMISGYVNNNRIDVARKLFEVM 125
+ M+ GY Q+ R EG +F +M P ++V+ +S + ++ + + M
Sbjct: 237 SVMINGYVQESRFKEGLGLFQDMMGEKIEPNESVL--VNALSACAHLGAMEQGQWIERYM 294
Query: 126 PEKNEVSW----TAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKAR 181
KN TA++ Y++CG ++ A E+F M K+V+A ++MI GL NG+ + A
Sbjct: 295 ERKNVRLTVRLGTALIDMYSKCGSVERALEVFHKMKEKNVLAWSAMINGLAINGQGKDA- 353
Query: 182 VVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLA 241
++LF+ M+ +GV+ N + I +L+ C+
Sbjct: 354 ------------------------------LNLFSQMEMQGVKPNEVTFIGILNACSHSK 383
Query: 242 SLDHGRQ-VHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASK-DIVMWNSI 299
+D G H+ + + ++ +Y + G L + + + + K + +W ++
Sbjct: 384 LVDEGCSFFHSMTSIYGLKPNAHHHCCMVDLYGRAGMLDQAQTVIKSMPFKPNSAIWGAL 443
Query: 300 ISGYAQYG---LGEKSLKVFHEMFSSGVMPDD----VTLVGVLSACSYTGKVKEGREI 350
++ +G LGE+ K E+ P+ V L + +AC +V E R +
Sbjct: 444 LNACRIHGDTELGEQVGKRLLEL-----DPNHGGRYVLLSNIYAACGRWDRVAELRRM 496
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 99/178 (55%), Gaps = 8/178 (4%)
Query: 2 PERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF- 60
PE + SW M+ GY++ G+ A +F MP+++VVSW+VM+ G++++SR + LF
Sbjct: 198 PECDGASWNIMIGGYLKCGVFKSARRMFEAMPDRDVVSWSVMINGYVQESRFKEGLGLFQ 257
Query: 61 DMMPEKDVVAQTNMV--LGYCQD-GRVDEGREIFDEMPKKNVISW----TTMISGYVNNN 113
DMM EK ++ +V L C G +++G+ I M +KNV T +I Y
Sbjct: 258 DMMGEKIEPNESVLVNALSACAHLGAMEQGQWIERYMERKNVRLTVRLGTALIDMYSKCG 317
Query: 114 RIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGL 171
++ A ++F M EKN ++W+AM+ G G+ +DA LF M M+ V + +G+
Sbjct: 318 SVERALEVFHKMKEKNVLAWSAMINGLAINGQGKDALNLFSQMEMQGVKPNEVTFIGI 375
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 69/310 (22%), Positives = 139/310 (44%), Gaps = 44/310 (14%)
Query: 136 MLMGYTQCGRIQDAWELFKAMPMKSVVASN---SMIL---GLGQNGEVQKARVVFDQMRE 189
+L + C ++D ++ + + N S IL L +G + AR +F ++R+
Sbjct: 38 ILRHLSSCKTLKDLTQIHAQTITTGIFSDNFVASRILSFAALSPHGSIPYARFLFYRIRK 97
Query: 190 KDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLIS---VLSVCASLASLDHG 246
D + +I+ Y ++ + ++ M + V FP + + +L C+ + SL G
Sbjct: 98 PDIFIANTLIRAYAFSPNPIDAVVFYSEMTESSVV--FPDVHTFPLLLKACSEIPSLRLG 155
Query: 247 RQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDN------------------- 287
+H+ + + + +V V++ L+ MY CG + L+FD
Sbjct: 156 EAIHSHVFKLGWSSEVSVSNFLVQMYASCGLIESAGLVFDRTPECDGASWNIMIGGYLKC 215
Query: 288 --FAS----------KDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVL 335
F S +D+V W+ +I+GY Q ++ L +F +M + P++ LV L
Sbjct: 216 GVFKSARRMFEAMPDRDVVSWSVMINGYVQESRFKEGLGLFQDMMGEKIEPNESVLVNAL 275
Query: 336 SACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPD 395
SAC++ G +++G+ I M+ K V ++D+ + G VE A+++ M E +
Sbjct: 276 SACAHLGAMEQGQWIERYMERKN-VRLTVRLGTALIDMYSKCGSVERALEVFHKMK-EKN 333
Query: 396 AIIWGSLLGA 405
+ W +++
Sbjct: 334 VLAWSAMING 343
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 100/226 (44%), Gaps = 22/226 (9%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM------PEK----NVVSWTVMLGGFIRD 50
MP+R+VVSW+ M+ GYV+E E LF M P + N +S LG +
Sbjct: 228 MPDRDVVSWSVMINGYVQESRFKEGLGLFQDMMGEKIEPNESVLVNALSACAHLGAMEQG 287
Query: 51 SRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYV 110
I+ R + V T ++ Y + G V+ E+F +M +KNV++W+ MI+G
Sbjct: 288 QWIE--RYMERKNVRLTVRLGTALIDMYSKCGSVERALEVFHKMKEKNVLAWSAMINGLA 345
Query: 111 NNNRIDVARKLFEVMP----EKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNS 166
N + A LF M + NEV++ +L + + + F +M + N+
Sbjct: 346 INGQGKDALNLFSQMEMQGVKPNEVTFIGILNACSHSKLVDEGCSFFHSMTSIYGLKPNA 405
Query: 167 -----MILGLGQNGEVQKARVVFDQMREK-DDATWSGMIKVYERKG 206
M+ G+ G + +A+ V M K + A W ++ G
Sbjct: 406 HHHCCMVDLYGRAGMLDQAQTVIKSMPFKPNSAIWGALLNACRIHG 451
>gi|224137994|ref|XP_002322703.1| predicted protein [Populus trichocarpa]
gi|222867333|gb|EEF04464.1| predicted protein [Populus trichocarpa]
Length = 627
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 210/520 (40%), Positives = 321/520 (61%), Gaps = 10/520 (1%)
Query: 89 EIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQD 148
++F+E +K+ +W+++IS + N +A + F M +N + T+ I
Sbjct: 110 QVFEESERKSSTTWSSVISSFAQNEEPVLAIQYFCRMIGENLCPDDHIFPSATKACAILG 169
Query: 149 AWELFKA---MPMKS-----VVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIK 200
++ K+ + +K+ V +S++ + G++++AR VFD+M ++ +WSGMI
Sbjct: 170 RCDVGKSVHCLVIKTGYDVDVFVGSSLVDMYAKCGDIKEARNVFDEMPHRNVVSWSGMIY 229
Query: 201 VYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDV 260
Y + G E + LF EG+ VN +L SV+ VC S L+ G+Q+H + +D+
Sbjct: 230 GYTQLGEHEEAMRLFKEALLEGLDVNDFTLSSVIRVCGSATLLELGKQIHGLCFKTSYDL 289
Query: 261 DVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMF 320
+V S LI++Y KCG + +FD K++ MWN+++ AQ+ +++ +F +M
Sbjct: 290 SGFVGSSLISLYSKCGLIEGAYRVFDEVPIKNLGMWNAMLIACAQHAHTKEAFDLFTKME 349
Query: 321 SSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQV 380
++G+ P+ +T + VL ACS+ G V+EG++ F MK KY +EP T+HYA MVDLLGRAG++
Sbjct: 350 NAGMRPNFITFLCVLYACSHAGLVEEGKKYFALMK-KYEIEPGTQHYASMVDLLGRAGKL 408
Query: 381 EDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIY 440
++A+ +I+ MP EP +WG+ + CR H DLA AA K+ +L ++G +++LSN Y
Sbjct: 409 QEALSVIKGMPTEPTESVWGAFITGCRIHGNTDLAAFAADKVFELGAVSSGLHVMLSNAY 468
Query: 441 ASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKI 500
A+ GR+ D A+ RK +R R V K G SWIE +VH F D H I + LE +
Sbjct: 469 AAAGRYEDAAKARKMLRDRGVKKETGLSWIEEGNRVHKFAAGDRF-HVRMKEIYQKLEDL 527
Query: 501 GGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVC 560
G + AGY D+SFVL +V EEK ++RYHSE+LA+A+GL+ +P G PIR+MKNLRVC
Sbjct: 528 GEEMERAGYVADTSFVLREVGSEEKNQTIRYHSERLAIAFGLISIPLGRPIRIMKNLRVC 587
Query: 561 GDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
GDCH+AIK ISK+ GR II+RD NRFH F+DG CSC DYW
Sbjct: 588 GDCHNAIKFISKLSGRVIIVRDNNRFHRFEDGKCSCADYW 627
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 117/250 (46%), Gaps = 9/250 (3%)
Query: 67 DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLF-EVM 125
DV +++V Y + G + E R +FDEMP +NV+SW+ MI GY + A +LF E +
Sbjct: 189 DVFVGSSLVDMYAKCGDIKEARNVFDEMPHRNVVSWSGMIYGYTQLGEHEEAMRLFKEAL 248
Query: 126 PEKNEVSWTAMLMGYTQCGRI-------QDAWELFKAMPMKSVVASNSMILGLGQNGEVQ 178
E +V+ + CG Q FK S +S+I + G ++
Sbjct: 249 LEGLDVNDFTLSSVIRVCGSATLLELGKQIHGLCFKTSYDLSGFVGSSLISLYSKCGLIE 308
Query: 179 KARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCA 238
A VFD++ K+ W+ M+ + + E DLFT M+ G+R NF + + VL C+
Sbjct: 309 GAYRVFDEVPIKNLGMWNAMLIACAQHAHTKEAFDLFTKMENAGMRPNFITFLCVLYACS 368
Query: 239 SLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDI-VMWN 297
++ G++ A + + + + + ++ + + G+L + + ++ +W
Sbjct: 369 HAGLVEEGKKYFALMKKYEIEPGTQHYASMVDLLGRAGKLQEALSVIKGMPTEPTESVWG 428
Query: 298 SIISGYAQYG 307
+ I+G +G
Sbjct: 429 AFITGCRIHG 438
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 108/233 (46%), Gaps = 16/233 (6%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFD--M 62
+V +++V Y + G I EA +F +MP +NVVSW+ M+ G+ + ++A RLF +
Sbjct: 189 DVFVGSSLVDMYAKCGDIKEARNVFDEMPHRNVVSWSGMIYGYTQLGEHEEAMRLFKEAL 248
Query: 63 MPEKDVVAQT-NMVLGYCQDGRVDE-GREI----FDEMPKKNVISWTTMISGYVNNNRID 116
+ DV T + V+ C + E G++I F + +++IS Y I+
Sbjct: 249 LEGLDVNDFTLSSVIRVCGSATLLELGKQIHGLCFKTSYDLSGFVGSSLISLYSKCGLIE 308
Query: 117 VARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMP----MKSVVASNSMILGLG 172
A ++F+ +P KN W AML+ Q ++A++LF M + + ++
Sbjct: 309 GAYRVFDEVPIKNLGMWNAMLIACAQHAHTKEAFDLFTKMENAGMRPNFITFLCVLYACS 368
Query: 173 QNGEVQKARVVFDQMR----EKDDATWSGMIKVYERKGYELEVIDLFTLMQKE 221
G V++ + F M+ E ++ M+ + R G E + + M E
Sbjct: 369 HAGLVEEGKKYFALMKKYEIEPGTQHYASMVDLLGRAGKLQEALSVIKGMPTE 421
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 74/163 (45%), Gaps = 4/163 (2%)
Query: 242 SLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIIS 301
SL G+Q+HA +++ V V LI Y K + +F+ K W+S+IS
Sbjct: 69 SLLKGQQIHAHIIKSGLQVIPLVCHYLINFYSKTQLPLLSSQVFEESERKSSTTWSSVIS 128
Query: 302 GYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIF-ESMKSKYLV 360
+AQ +++ F M + PDD AC+ G+ G+ + +K+ Y V
Sbjct: 129 SFAQNEEPVLAIQYFCRMIGENLCPDDHIFPSATKACAILGRCDVGKSVHCLVIKTGYDV 188
Query: 361 EPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
+ + +VD+ + G +++A + + MP + + W ++
Sbjct: 189 DVFVG--SSLVDMYAKCGDIKEARNVFDEMPHR-NVVSWSGMI 228
>gi|414876354|tpg|DAA53485.1| TPA: hypothetical protein ZEAMMB73_494075 [Zea mays]
Length = 830
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 228/614 (37%), Positives = 348/614 (56%), Gaps = 31/614 (5%)
Query: 12 MVRGYVEEGMITEAGTLFWQMPEKNVVSWTVML--GGFIRDSRIDDA--RRL-FDMMPEK 66
+++ G + +A L +P ++ +L RD+ + A RRL D +
Sbjct: 223 LIQMLCAHGRLAQATALLQGLPAPTQRTYESLLLAAARARDTALAAAVHRRLEADPVFRS 282
Query: 67 DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMP 126
D T ++ Y + R++FDE P KN+ W M+ + + A M
Sbjct: 283 DPFLSTRLIEAYAALSALPAARQVFDEAPVKNIFVWNAMLKALALADHGEEALTCLADMG 342
Query: 127 E--------------KNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLG 172
K ++ +A + + R A + + + + VA+ ++I
Sbjct: 343 RLGVPVDSYSYAHGLKACIAASASHLPASARVREMHAHAIRRGYGLHTHVAT-TLIDCYA 401
Query: 173 QNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRV--NFPSL 230
+ G V A VF M +++ +WS MI Y + + I +F M + N ++
Sbjct: 402 KLGIVSYAERVFTSMPDRNLVSWSAMIGCYAKNERPGDAIQIFQEMMASDADLVPNSITI 461
Query: 231 ISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFAS 290
+SVL CA + +L G+ +HA ++R FD+ V V + L+ MY+KCG L G+ IF+
Sbjct: 462 VSVLHACAGVNALGQGKVLHAYILRRGFDLLVSVLNALMAMYMKCGCLETGRYIFNWIGR 521
Query: 291 K-DIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGRE 349
+ ++V WNS+ISGY +G G +SL+VF EM G+ P+ +T V VL ACS+ G V++G++
Sbjct: 522 RRNVVSWNSLISGYGMHGFGRESLQVFEEMIEEGISPNIITFVSVLGACSHVGLVEQGKK 581
Query: 350 IFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTH 409
+FESM +Y V P+ EHYACMVDLLGRAG++++A++LI++M +P +WGSLLGACR H
Sbjct: 582 LFESM-VEYNVTPRAEHYACMVDLLGRAGRLDEAVELIQSMRIQPSPQVWGSLLGACRIH 640
Query: 410 MKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSW 469
++ AE+A L LEP+NAG Y+LL++IYA + V L++ + + + K PGCSW
Sbjct: 641 GHVEYAEMACSHLFDLEPRNAGNYVLLADIYARAKLQNQVDVLKELLEEHALEKVPGCSW 700
Query: 470 IEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGL---LREAGYCPDSSFVLHDVDEEEKV 526
IEV+KK++ F D ++P + + IG ++ GY PD+ VL+D++EEEK
Sbjct: 701 IEVKKKLYSFVSVD----NKNPQVEELQALIGEFVTQMKNEGYVPDTRSVLYDIEEEEKE 756
Query: 527 HSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRF 586
L HSEKLAVA+GL+K G IR+ KNLR+C DCHS K ISK REI++RD NRF
Sbjct: 757 RILLGHSEKLAVAFGLIKTGSGEAIRITKNLRLCEDCHSVTKFISKFTDREIVVRDVNRF 816
Query: 587 HHFKDGLCSCRDYW 600
HHF++G+CSCRDYW
Sbjct: 817 HHFRNGVCSCRDYW 830
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 117/263 (44%), Gaps = 55/263 (20%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFD--MMPEKD 67
T ++ Y + G+++ A +F MP++N+VSW+ M+G + ++ R DA ++F M + D
Sbjct: 394 TTLIDCYAKLGIVSYAERVFTSMPDRNLVSWSAMIGCYAKNERPGDAIQIFQEMMASDAD 453
Query: 68 VVAQTNMVLG---------------------------------------YCQDGRVDEGR 88
+V + ++ Y + G ++ GR
Sbjct: 454 LVPNSITIVSVLHACAGVNALGQGKVLHAYILRRGFDLLVSVLNALMAMYMKCGCLETGR 513
Query: 89 EIFDEMP-KKNVISWTTMISGYVNNNRIDVARKLFEVMPEK----NEVSWTAMLMGYTQC 143
IF+ + ++NV+SW ++ISGY + + ++FE M E+ N +++ ++L +
Sbjct: 514 YIFNWIGRRRNVVSWNSLISGYGMHGFGRESLQVFEEMIEEGISPNIITFVSVLGACSHV 573
Query: 144 GRIQDAWELFKAMPMKSVVASNS----MILGLGQNGEVQKARVVFDQMR-EKDDATWSGM 198
G ++ +LF++M +V M+ LG+ G + +A + MR + W +
Sbjct: 574 GLVEQGKKLFESMVEYNVTPRAEHYACMVDLLGRAGRLDEAVELIQSMRIQPSPQVWGSL 633
Query: 199 IKVYERKGY----ELEVIDLFTL 217
+ G+ E+ LF L
Sbjct: 634 LGACRIHGHVEYAEMACSHLFDL 656
>gi|357133320|ref|XP_003568274.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Brachypodium distachyon]
Length = 919
Score = 404 bits (1037), Expect = e-109, Method: Compositional matrix adjust.
Identities = 227/639 (35%), Positives = 353/639 (55%), Gaps = 62/639 (9%)
Query: 16 YVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMM---------PEK 66
YV+ G I EA +F NVV W +ML + +IDD + FD+ P K
Sbjct: 289 YVKSGDIEEALQIFDSGDRTNVVLWNLMLVAY---GQIDDLAKSFDIFYRMLAAGVRPNK 345
Query: 67 DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISG-----YVNNNRIDVARKL 121
M+ G + G +I + KN +SG Y +D A+++
Sbjct: 346 --FTYPCMLRTCTHTGEIGLGEQI-HSLTIKNGFQSDMYVSGVLIDMYSKYGWLDKAQRI 402
Query: 122 FEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMP----------MKSVVASNSMILGL 171
+++ EK+ VSWT+M+ GY Q ++A E FK M + S +++ + I +
Sbjct: 403 LDMIEEKDVVSWTSMIAGYVQHEFCKEALETFKEMQACGIWPDNIGLASAISACAGIKAV 462
Query: 172 GQNGEVQKARVV------------------------------FDQMREKDDATWSGMIKV 201
Q ++ ARV F+ + K+ TW+G+I
Sbjct: 463 HQGSQIH-ARVYVSGYSADVSIWNGLVYLYARCGISKEAFSSFEAIEHKEGITWNGLISG 521
Query: 202 YERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVD 261
+ + G E + +F M + G + N + +S +S A+LA + G+Q+HA++++ + +
Sbjct: 522 FAQSGLYEEALKVFMKMDQAGAKYNVFTFVSSISASANLADIKQGKQIHARVIKTGYTSE 581
Query: 262 VYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFS 321
+++ LI++Y KCG + K+ F ++ V WN+II+ +Q+G G ++L +F +M
Sbjct: 582 TEISNALISLYGKCGSIEDAKMDFFEMTKRNEVSWNTIITCCSQHGRGLEALDLFDQMKQ 641
Query: 322 SGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVE 381
G+ P DVT VGVL+ACS+ G V+EG F+SM +++ + P+ +HYAC+VD+LGRAGQ++
Sbjct: 642 QGLKPSDVTFVGVLTACSHVGLVEEGLCYFKSMSNEHGIHPRPDHYACVVDILGRAGQLD 701
Query: 382 DAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYA 441
A + +E MP D+++W +LL AC+ H L++ E AAK LL+LEP ++ Y+LLSN YA
Sbjct: 702 RAKRFVEEMPIPADSMVWRTLLSACKVHKNLEIGEFAAKHLLELEPHDSASYVLLSNAYA 761
Query: 442 SQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIG 501
G++ ++RK M+ R V K PG SWIEV+ VH F D + HP I L +
Sbjct: 762 VTGKWASRDQIRKIMKDRGVRKEPGRSWIEVKNVVHAFFVGDRL-HPLADQIYNFLSHLN 820
Query: 502 GLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCG 561
L + GY ++ + H+ ++E K + HSEKLAVA+GL+ LP +P+RV+KNLRVC
Sbjct: 821 DRLYKIGYKQENYHLFHEKEKEGKDPTAFVHSEKLAVAFGLMSLPSCMPLRVIKNLRVCN 880
Query: 562 DCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
DCH+ +K S VMGREI+LRD RFHHF +G CSC DYW
Sbjct: 881 DCHTWMKFTSGVMGREIVLRDVYRFHHFNNGSCSCGDYW 919
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 128/518 (24%), Positives = 231/518 (44%), Gaps = 61/518 (11%)
Query: 16 YVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQT--- 72
Y ++G + A +F ++ ++ VSW +L G+ ++ ++A RL+ M VV
Sbjct: 87 YAKKGFVRRARRVFEELSVRDNVSWVAVLSGYAQNGLGEEAVRLYREMHRSGVVPTPYVL 146
Query: 73 NMVLGYCQDGRVDE-GREIFDEMPKKNVISWT----TMISGYVNNNRIDVARKLFEVMPE 127
+ +L C + + GR I ++ K+ S T +IS Y+ +A ++F M
Sbjct: 147 SSILSACTKTELFQLGRLIHVQVYKQGFFSETFVGNALISLYLRCRSFRLADRVFCDMLY 206
Query: 128 KNEVSWTAMLMGYTQCGRIQDAWELFKAM------PMKSVVAS----------------- 164
+ V++ ++ G+ QCG A +F M P +AS
Sbjct: 207 CDSVTFNTLISGHAQCGHGDRALGIFDEMQLSGLSPDSVTIASLLAACSAVGDLRKGKQL 266
Query: 165 NSMILGLG----------------QNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYE 208
+S +L G ++G++++A +FD + W+ M+ Y +
Sbjct: 267 HSYLLKAGMSLDYIMEGSLLDLYVKSGDIEEALQIFDSGDRTNVVLWNLMLVAYGQIDDL 326
Query: 209 LEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVL 268
+ D+F M GVR N + +L C + G Q+H+ ++ F D+YV+ VL
Sbjct: 327 AKSFDIFYRMLAAGVRPNKFTYPCMLRTCTHTGEIGLGEQIHSLTIKNGFQSDMYVSGVL 386
Query: 269 ITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDD 328
I MY K G L K + I D KD+V W S+I+GY Q+ +++L+ F EM + G+ PD+
Sbjct: 387 IDMYSKYGWLDKAQRILDMIEEKDVVSWTSMIAGYVQHEFCKEALETFKEMQACGIWPDN 446
Query: 329 VTLVGVLSACSYTGKVKEGREIFESMK-SKYLVEPKTEHYACMVDLLGRAGQVEDAMKLI 387
+ L +SAC+ V +G +I + S Y + + +V L R G ++A
Sbjct: 447 IGLASAISACAGIKAVHQGSQIHARVYVSGYSADVSI--WNGLVYLYARCGISKEAFSSF 504
Query: 388 EAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNA--GPYILLSNIYASQGR 445
EA+ + I W L+ + L E A K ++++ A + +S+I AS
Sbjct: 505 EAIE-HKEGITWNGLISG---FAQSGLYEEALKVFMKMDQAGAKYNVFTFVSSISASA-- 558
Query: 446 FHDVAELRKNMR-KRNVIKPPGCSWIEVEKKVHMFTGR 482
++A++++ + VIK S E+ + G+
Sbjct: 559 --NLADIKQGKQIHARVIKTGYTSETEISNALISLYGK 594
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 141/269 (52%), Gaps = 20/269 (7%)
Query: 150 WELFKAMPMKSVVAS--------NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKV 201
W L + K+++ N +I + G V++AR VF+++ +D+ +W ++
Sbjct: 58 WPLVPEIHAKAIICGLSGYRIIGNLLIDLYAKKGFVRRARRVFEELSVRDNVSWVAVLSG 117
Query: 202 YERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVD 261
Y + G E + L+ M + GV L S+LS C GR +H Q+ + F +
Sbjct: 118 YAQNGLGEEAVRLYREMHRSGVVPTPYVLSSILSACTKTELFQLGRLIHVQVYKQGFFSE 177
Query: 262 VYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFS 321
+V + LI++Y++C +F + D V +N++ISG+AQ G G+++L +F EM
Sbjct: 178 TFVGNALISLYLRCRSFRLADRVFCDMLYCDSVTFNTLISGHAQCGHGDRALGIFDEMQL 237
Query: 322 SGVMPDDVTLVGVLSACSYTGKVKEGREIFE-----SMKSKYLVEPKTEHYACMVDLLGR 376
SG+ PD VT+ +L+ACS G +++G+++ M Y++E ++DL +
Sbjct: 238 SGLSPDSVTIASLLAACSAVGDLRKGKQLHSYLLKAGMSLDYIME------GSLLDLYVK 291
Query: 377 AGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
+G +E+A+++ ++ + ++W +L A
Sbjct: 292 SGDIEEALQIFDSGD-RTNVVLWNLMLVA 319
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 111/469 (23%), Positives = 203/469 (43%), Gaps = 67/469 (14%)
Query: 32 MPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGY----CQDGRVDEG 87
M + S+ L GF+ DD +L + K + MVLG C
Sbjct: 1 MTPRGAASFNRPLAGFLAP---DDPEKLLPLFAAK---CRQYMVLGAVDFACALRACRGS 54
Query: 88 REIFDEMPKKNVISWTTMISGY--VNNNRIDV---------ARKLFEVMPEKNEVSWTAM 136
+ +P+ + + +SGY + N ID+ AR++FE + ++ VSW A+
Sbjct: 55 GRRWPLVPEIHAKAIICGLSGYRIIGNLLIDLYAKKGFVRRARRVFEELSVRDNVSWVAV 114
Query: 137 LMGYTQCGRIQDAWELFKAMPMKSVV------------ASNSMILGLGQNGEVQ------ 178
L GY Q G ++A L++ M VV + + + LG+ VQ
Sbjct: 115 LSGYAQNGLGEEAVRLYREMHRSGVVPTPYVLSSILSACTKTELFQLGRLIHVQVYKQGF 174
Query: 179 ---------------------KARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTL 217
A VF M D T++ +I + + G+ + +F
Sbjct: 175 FSETFVGNALISLYLRCRSFRLADRVFCDMLYCDSVTFNTLISGHAQCGHGDRALGIFDE 234
Query: 218 MQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGE 277
MQ G+ + ++ S+L+ C+++ L G+Q+H+ L++ +D + L+ +Y+K G+
Sbjct: 235 MQLSGLSPDSVTIASLLAACSAVGDLRKGKQLHSYLLKAGMSLDYIMEGSLLDLYVKSGD 294
Query: 278 LVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSA 337
+ + IFD+ ++V+WN ++ Y Q KS +F+ M ++GV P+ T +L
Sbjct: 295 IEEALQIFDSGDRTNVVLWNLMLVAYGQIDDLAKSFDIFYRMLAAGVRPNKFTYPCMLRT 354
Query: 338 CSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAI 397
C++TG++ G +I S+ K + ++D+ + G ++ A ++++ M E D +
Sbjct: 355 CTHTGEIGLGEQI-HSLTIKNGFQSDMYVSGVLIDMYSKYGWLDKAQRILD-MIEEKDVV 412
Query: 398 IWGSLLGACRTH--MKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQG 444
W S++ H K L + + P N G L S I A G
Sbjct: 413 SWTSMIAGYVQHEFCKEALETFKEMQACGIWPDNIG---LASAISACAG 458
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 125/266 (46%), Gaps = 24/266 (9%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM------PEK----NVVSWTVMLGGFIRD 50
+ E++VVSWT+M+ GYV+ EA F +M P+ + +S + +
Sbjct: 406 IEEKDVVSWTSMIAGYVQHEFCKEALETFKEMQACGIWPDNIGLASAISACAGIKAVHQG 465
Query: 51 SRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYV 110
S+I R++ DV +V Y + G E F+ + K I+W +ISG+
Sbjct: 466 SQIH--ARVYVSGYSADVSIWNGLVYLYARCGISKEAFSSFEAIEHKEGITWNGLISGFA 523
Query: 111 NNNRIDVARKLFEVMPEK----------NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKS 160
+ + A K+F M + + +S +A L Q +I + K
Sbjct: 524 QSGLYEEALKVFMKMDQAGAKYNVFTFVSSISASANLADIKQGKQIHA--RVIKTGYTSE 581
Query: 161 VVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQK 220
SN++I G+ G ++ A++ F +M ++++ +W+ +I + G LE +DLF M++
Sbjct: 582 TEISNALISLYGKCGSIEDAKMDFFEMTKRNEVSWNTIITCCSQHGRGLEALDLFDQMKQ 641
Query: 221 EGVRVNFPSLISVLSVCASLASLDHG 246
+G++ + + + VL+ C+ + ++ G
Sbjct: 642 QGLKPSDVTFVGVLTACSHVGLVEEG 667
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 101/241 (41%), Gaps = 24/241 (9%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV----VSWTVMLGGFIRDSRIDDA 56
M +RN VSW ++ + G EA LF QM ++ + V++ +L +++
Sbjct: 608 MTKRNEVSWNTIITCCSQHGRGLEALDLFDQMKQQGLKPSDVTFVGVLTACSHVGLVEEG 667
Query: 57 RRLFDMM-------PEKDVVAQTNMVLGYCQDGRVDEGREIFDEMP-KKNVISWTTMISG 108
F M P D A +LG + G++D + +EMP + + W T++S
Sbjct: 668 LCYFKSMSNEHGIHPRPDHYACVVDILG--RAGQLDRAKRFVEEMPIPADSMVWRTLLSA 725
Query: 109 YVNNNRIDV----ARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVAS 164
+ +++ A+ L E+ P + S+ + Y G+ ++ K M + V
Sbjct: 726 CKVHKNLEIGEFAAKHLLELEPH-DSASYVLLSNAYAVTGKWASRDQIRKIMKDRGVRKE 784
Query: 165 NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERK---GYELEVIDLFTLMQKE 221
+N V A V D++ D ++ + + +R GY+ E LF +KE
Sbjct: 785 PGRSWIEVKN--VVHAFFVGDRLHPLADQIYNFLSHLNDRLYKIGYKQENYHLFHEKEKE 842
Query: 222 G 222
G
Sbjct: 843 G 843
>gi|15231831|ref|NP_188050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546762|sp|Q9LUL5.2|PP229_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g14330
gi|332641981|gb|AEE75502.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 710
Score = 404 bits (1037), Expect = e-109, Method: Compositional matrix adjust.
Identities = 206/540 (38%), Positives = 325/540 (60%), Gaps = 42/540 (7%)
Query: 103 TTMISGYVNNNRIDVARKLFEVMPEKN---EVSWTAMLMGYTQCGRIQDAWELFKAM--- 156
+ +I+ + R+D+ARK+F+ + + + E W AM +GY++ G +DA ++ M
Sbjct: 171 SKLITLFSVCRRLDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCS 230
Query: 157 -----------PMKSVVASNSMILGLGQNGEVQK-------------------------A 180
+K+ V + +G G + ++ K A
Sbjct: 231 FIEPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDA 290
Query: 181 RVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASL 240
R VFD M E++ TW+ +I V +K E+ +LF MQ+E + ++ +L ++L C+ +
Sbjct: 291 RKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRV 350
Query: 241 ASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSII 300
A+L G+++HAQ+++ + DV + + L+ MY KCGE+ + +FD +KD+ WN ++
Sbjct: 351 AALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIML 410
Query: 301 SGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLV 360
+ YA G E+ + +F M SGV PD +T V +LS CS TG + G +FE MK+++ V
Sbjct: 411 NCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRV 470
Query: 361 EPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAK 420
P EHYAC+VD+LGRAG++++A+K+IE MPF+P A IWGSLL +CR H + + E+AAK
Sbjct: 471 SPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLHGNVSVGEIAAK 530
Query: 421 KLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFT 480
+L LEP N G Y+++SNIYA + +V ++R+ M++R V K GCSW++V+ K+ +F
Sbjct: 531 ELFVLEPHNPGNYVMVSNIYADAKMWDNVDKIREMMKQRGVKKEAGCSWVQVKDKIQIFV 590
Query: 481 GRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAY 540
++ ++ + ++GY P++S VLHDVDEE K + + HSE+LA Y
Sbjct: 591 AGGGYEFRNSDEYKKVWTELQEAIEKSGYSPNTSVVLHDVDEETKANWVCGHSERLATTY 650
Query: 541 GLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
L+ EGVPIR+ KNLRVC DCHS +K++S+V R I+LRD RFHHF DG+CSC+DYW
Sbjct: 651 SLIHTGEGVPIRITKNLRVCADCHSWMKIVSQVTRRVIVLRDTKRFHHFVDGICSCKDYW 710
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 144/318 (45%), Gaps = 20/318 (6%)
Query: 9 WTAMVRGYVEEGMITEAGTLFWQM----PEKNVVSWTVMLGGFI--RDSRIDDA--RRLF 60
W AM GY G +A ++ M E S +V L + +D R+ ++
Sbjct: 204 WAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSISVALKACVDLKDLRVGRGIHAQIV 263
Query: 61 DMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARK 120
+ D V ++ Y + G D+ R++FD M ++NV++W ++IS R+
Sbjct: 264 KRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFN 323
Query: 121 LFEVMPEKN-EVSWTAMLMGYTQCGRIQDAW-------ELFKAMPMKSVVASNSMILGLG 172
LF M E+ SW + C R+ ++ K+ V NS++ G
Sbjct: 324 LFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYG 383
Query: 173 QNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLIS 232
+ GEV+ +R VFD M KD A+W+ M+ Y G EVI+LF M + GV + + ++
Sbjct: 384 KCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVA 443
Query: 233 VLSVCASLASLDHGRQVHAQLVRCQFDVDVYVA--SVLITMYIKCGELVKGKLIFDNFAS 290
+LS C+ ++G + ++ + +F V + + L+ + + G++ + + +
Sbjct: 444 LLSGCSDTGLTEYGLSLFERM-KTEFRVSPALEHYACLVDILGRAGKIKEAVKVIETMPF 502
Query: 291 K-DIVMWNSIISGYAQYG 307
K +W S+++ +G
Sbjct: 503 KPSASIWGSLLNSCRLHG 520
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 109/239 (45%), Gaps = 22/239 (9%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV-VSWTVMLGGFIRDSRI------ 53
M ERNVV+W +++ ++ + E LF +M E+ + SW + SR+
Sbjct: 297 MSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTG 356
Query: 54 -DDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+ ++ + DV +++ Y + G V+ R +FD M K++ SW M++ Y N
Sbjct: 357 KEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAIN 416
Query: 113 NRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVAS---- 164
I+ LFE M E + +++ A+L G + G + LF+ M + V+
Sbjct: 417 GNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEH 476
Query: 165 -NSMILGLGQNGEVQKARVVFDQMREKDDAT-WSGMIKVYERKGY----ELEVIDLFTL 217
++ LG+ G++++A V + M K A+ W ++ G E+ +LF L
Sbjct: 477 YACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLHGNVSVGEIAAKELFVL 535
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 84/177 (47%), Gaps = 8/177 (4%)
Query: 233 VLSVCASLASLDHGRQVHAQLVRC-QFDVDVYVASVLITMYIKCGELVKGKLIFDNFASK 291
+L C S SL HG ++ + ++ + + S LIT++ C L + IFD+
Sbjct: 137 LLHACISAKSLHHGIKICSLILNNPSLRHNPKLLSKLITLFSVCRRLDLARKIFDDVTDS 196
Query: 292 DIV---MWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGR 348
++ +W ++ GY++ G +L V+ +M S + P + ++ L AC ++ GR
Sbjct: 197 SLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSISVALKACVDLKDLRVGR 256
Query: 349 EIFESM-KSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLG 404
I + K K V+ Y ++ L +G +DA K+ + M E + + W SL+
Sbjct: 257 GIHAQIVKRKEKVDQVV--YNVLLKLYMESGLFDDARKVFDGMS-ERNVVTWNSLIS 310
>gi|15226879|ref|NP_181048.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75099187|sp|O64766.1|PP185_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g35030, mitochondrial; Flags: Precursor
gi|3033399|gb|AAC12843.1| hypothetical protein [Arabidopsis thaliana]
gi|209414526|gb|ACI46503.1| At2g35030 [Arabidopsis thaliana]
gi|330253957|gb|AEC09051.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 627
Score = 404 bits (1037), Expect = e-109, Method: Compositional matrix adjust.
Identities = 194/506 (38%), Positives = 315/506 (62%), Gaps = 4/506 (0%)
Query: 4 RNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMM 63
+NVV+WTAMV GY+ ++ A LF +MPE+NVVSW M+ G+ + RID A LFD M
Sbjct: 107 KNVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEM 166
Query: 64 PEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFE 123
PE+++V+ +MV Q GR+DE +F+ MP+++V+SWT M+ G N ++D AR+LF+
Sbjct: 167 PERNIVSWNSMVKALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLFD 226
Query: 124 VMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVV 183
MPE+N +SW AM+ GY Q RI +A +LF+ MP + + N+MI G +N E+ KA +
Sbjct: 227 CMPERNIISWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKACGL 286
Query: 184 FDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEG-VRVNFPSLISVLSVCASLAS 242
FD+M EK+ +W+ MI Y E +++F+ M ++G V+ N + +S+LS C+ LA
Sbjct: 287 FDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAG 346
Query: 243 LDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDN--FASKDIVMWNSII 300
L G+Q+H + + + V S L+ MY K GEL+ + +FDN +D++ WNS+I
Sbjct: 347 LVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMI 406
Query: 301 SGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLV 360
+ YA +G G+++++++++M G P VT + +L ACS+ G V++G E F+ + +
Sbjct: 407 AVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESL 466
Query: 361 EPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAK 420
+ EHY C+VDL GRAG+++D I +G++L AC H ++ +A+ K
Sbjct: 467 PLREEHYTCLVDLCGRAGRLKDVTNFINCDDARLSRSFYGAILSACNVHNEVSIAKEVVK 526
Query: 421 KLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFT 480
K+L+ +AG Y+L+SNIYA+ G+ + AE+R M+++ + K PGCSW++V K+ H+F
Sbjct: 527 KVLETGSDDAGTYVLMSNIYAANGKREEAAEMRMKMKEKGLKKQPGCSWVKVGKQNHLFV 586
Query: 481 GRDCVSHPEHPMIMRMLEKIGGLLRE 506
D SHP+ + +L + +R+
Sbjct: 587 VGD-KSHPQFEALDSILSDLRNKMRK 611
Score = 205 bits (521), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 116/370 (31%), Positives = 210/370 (56%), Gaps = 12/370 (3%)
Query: 43 MLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEM-PKKNVIS 101
++G + +I +AR+LFD +PE+DVV T+++ GY + G + E RE+FD + +KNV++
Sbjct: 52 LIGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDSRKNVVT 111
Query: 102 WTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSV 161
WT M+SGY+ + ++ +A LF+ MPE+N VSW M+ GY Q GRI A ELF MP +++
Sbjct: 112 WTAMVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNI 171
Query: 162 VASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKE 221
V+ NSM+ L Q G + +A +F++M +D +W+ M+ + G E LF M +
Sbjct: 172 VSWNSMVKALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLFDCMPER 231
Query: 222 GVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKG 281
+ +++ ++I+ + + D QL + + D + +IT +I+ E+ K
Sbjct: 232 NI-ISWNAMITGYAQNNRIDEAD-------QLFQVMPERDFASWNTMITGFIRNREMNKA 283
Query: 282 KLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSG-VMPDDVTLVGVLSACSY 340
+FD K+++ W ++I+GY + E++L VF +M G V P+ T V +LSACS
Sbjct: 284 CGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSD 343
Query: 341 TGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIE-AMPFEPDAIIW 399
+ EG++I + + SK + + + ++++ ++G++ A K+ + + + D I W
Sbjct: 344 LAGLVEGQQIHQ-LISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISW 402
Query: 400 GSLLGACRTH 409
S++ H
Sbjct: 403 NSMIAVYAHH 412
>gi|9279581|dbj|BAB01039.1| unnamed protein product [Arabidopsis thaliana]
Length = 717
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 206/540 (38%), Positives = 325/540 (60%), Gaps = 42/540 (7%)
Query: 103 TTMISGYVNNNRIDVARKLFEVMPEKN---EVSWTAMLMGYTQCGRIQDAWELFKAM--- 156
+ +I+ + R+D+ARK+F+ + + + E W AM +GY++ G +DA ++ M
Sbjct: 178 SKLITLFSVCRRLDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCS 237
Query: 157 -----------PMKSVVASNSMILGLGQNGEVQK-------------------------A 180
+K+ V + +G G + ++ K A
Sbjct: 238 FIEPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDA 297
Query: 181 RVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASL 240
R VFD M E++ TW+ +I V +K E+ +LF MQ+E + ++ +L ++L C+ +
Sbjct: 298 RKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRV 357
Query: 241 ASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSII 300
A+L G+++HAQ+++ + DV + + L+ MY KCGE+ + +FD +KD+ WN ++
Sbjct: 358 AALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIML 417
Query: 301 SGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLV 360
+ YA G E+ + +F M SGV PD +T V +LS CS TG + G +FE MK+++ V
Sbjct: 418 NCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRV 477
Query: 361 EPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAK 420
P EHYAC+VD+LGRAG++++A+K+IE MPF+P A IWGSLL +CR H + + E+AAK
Sbjct: 478 SPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLHGNVSVGEIAAK 537
Query: 421 KLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFT 480
+L LEP N G Y+++SNIYA + +V ++R+ M++R V K GCSW++V+ K+ +F
Sbjct: 538 ELFVLEPHNPGNYVMVSNIYADAKMWDNVDKIREMMKQRGVKKEAGCSWVQVKDKIQIFV 597
Query: 481 GRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAY 540
++ ++ + ++GY P++S VLHDVDEE K + + HSE+LA Y
Sbjct: 598 AGGGYEFRNSDEYKKVWTELQEAIEKSGYSPNTSVVLHDVDEETKANWVCGHSERLATTY 657
Query: 541 GLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
L+ EGVPIR+ KNLRVC DCHS +K++S+V R I+LRD RFHHF DG+CSC+DYW
Sbjct: 658 SLIHTGEGVPIRITKNLRVCADCHSWMKIVSQVTRRVIVLRDTKRFHHFVDGICSCKDYW 717
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 144/318 (45%), Gaps = 20/318 (6%)
Query: 9 WTAMVRGYVEEGMITEAGTLFWQM----PEKNVVSWTVMLGGFI--RDSRIDDA--RRLF 60
W AM GY G +A ++ M E S +V L + +D R+ ++
Sbjct: 211 WAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSISVALKACVDLKDLRVGRGIHAQIV 270
Query: 61 DMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARK 120
+ D V ++ Y + G D+ R++FD M ++NV++W ++IS R+
Sbjct: 271 KRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFN 330
Query: 121 LFEVMPEKN-EVSWTAMLMGYTQCGRIQDAW-------ELFKAMPMKSVVASNSMILGLG 172
LF M E+ SW + C R+ ++ K+ V NS++ G
Sbjct: 331 LFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYG 390
Query: 173 QNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLIS 232
+ GEV+ +R VFD M KD A+W+ M+ Y G EVI+LF M + GV + + ++
Sbjct: 391 KCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVA 450
Query: 233 VLSVCASLASLDHGRQVHAQLVRCQFDVDVYVA--SVLITMYIKCGELVKGKLIFDNFAS 290
+LS C+ ++G + ++ + +F V + + L+ + + G++ + + +
Sbjct: 451 LLSGCSDTGLTEYGLSLFERM-KTEFRVSPALEHYACLVDILGRAGKIKEAVKVIETMPF 509
Query: 291 K-DIVMWNSIISGYAQYG 307
K +W S+++ +G
Sbjct: 510 KPSASIWGSLLNSCRLHG 527
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 109/239 (45%), Gaps = 22/239 (9%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV-VSWTVMLGGFIRDSRI------ 53
M ERNVV+W +++ ++ + E LF +M E+ + SW + SR+
Sbjct: 304 MSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTG 363
Query: 54 -DDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+ ++ + DV +++ Y + G V+ R +FD M K++ SW M++ Y N
Sbjct: 364 KEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAIN 423
Query: 113 NRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVAS---- 164
I+ LFE M E + +++ A+L G + G + LF+ M + V+
Sbjct: 424 GNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEH 483
Query: 165 -NSMILGLGQNGEVQKARVVFDQMREKDDAT-WSGMIKVYERKGY----ELEVIDLFTL 217
++ LG+ G++++A V + M K A+ W ++ G E+ +LF L
Sbjct: 484 YACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLHGNVSVGEIAAKELFVL 542
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 84/177 (47%), Gaps = 8/177 (4%)
Query: 233 VLSVCASLASLDHGRQVHAQLVRC-QFDVDVYVASVLITMYIKCGELVKGKLIFDNFASK 291
+L C S SL HG ++ + ++ + + S LIT++ C L + IFD+
Sbjct: 144 LLHACISAKSLHHGIKICSLILNNPSLRHNPKLLSKLITLFSVCRRLDLARKIFDDVTDS 203
Query: 292 DIV---MWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGR 348
++ +W ++ GY++ G +L V+ +M S + P + ++ L AC ++ GR
Sbjct: 204 SLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSISVALKACVDLKDLRVGR 263
Query: 349 EIFESM-KSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLG 404
I + K K V+ Y ++ L +G +DA K+ + M E + + W SL+
Sbjct: 264 GIHAQIVKRKEKVDQVV--YNVLLKLYMESGLFDDARKVFDGMS-ERNVVTWNSLIS 317
>gi|449494221|ref|XP_004159483.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Cucumis sativus]
Length = 638
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 213/549 (38%), Positives = 335/549 (61%), Gaps = 19/549 (3%)
Query: 65 EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEV 124
+ D++ ++ Y + G VD R++FDEMP ++++SW TMI N + A L
Sbjct: 96 KTDLLTSNILINMYSKCGSVDFARQVFDEMPSRSLVSWNTMIGSLTQNGEENEALDLLLQ 155
Query: 125 MPEK----NEVSWTAMLMG------YTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQN 174
M + +E + +++L ++C ++ A+ + AM + VA+ +++ +
Sbjct: 156 MQREGTPFSEFTISSVLCACAAKCALSEC-QLLHAFAIKAAMDLNVFVAT-ALLDVYAKC 213
Query: 175 GEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVL 234
G ++ A VF+ M ++ TWS M Y + + + LF + G++ + + SV+
Sbjct: 214 GLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMYEQALALFRKAWETGLKHDQFLMSSVI 273
Query: 235 SVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIV 294
CA LA++ G+QV+A L + F +++VAS LI MY KCG + + +F + +++V
Sbjct: 274 CACAGLAAMIEGKQVNALLSKSGFCSNIFVASSLIDMYAKCGGIEESYKVFRDVEKRNVV 333
Query: 295 MWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESM 354
+WN++ISG +++ + + +F +M G+ P+DVT V VLSAC + G VK+G++ F+ M
Sbjct: 334 LWNAMISGLSRHARSLEVMILFEKMQQMGLSPNDVTFVSVLSACGHMGLVKKGQKYFDLM 393
Query: 355 KSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDL 414
++ + P HY+CMVD L RAGQ+ +A LI +PF A +WGSLL +CRTH L+L
Sbjct: 394 TKEHHLAPNVFHYSCMVDTLSRAGQIFEAYDLISKLPFNASASMWGSLLASCRTHGNLEL 453
Query: 415 AEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEK 474
AEVAAKKL +EP N+G Y+LLSN+YA+ G++ +VA++RK +++ +V K G SWIE++
Sbjct: 454 AEVAAKKLFDIEPHNSGNYLLLSNMYAANGKWDEVAKMRKLLKESDVKKERGKSWIEIKD 513
Query: 475 KVHMFTGRDCVSHPEHPMIMRMLEKIGGL---LREAGYCPDSSFVLHDVDEEEKVHSLRY 531
KVH+F V HP I+ + K+ + L++ GY ++ LH V E K LR+
Sbjct: 514 KVHLFM----VGERNHPKIVEIYSKLNEVMDELQKLGYKVETQHDLHQVGESIKQELLRH 569
Query: 532 HSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKD 591
HSEKLA GL+ LP PIR+MKNLR+CGDCHS +KL SK R++I+RD NRFHHFK+
Sbjct: 570 HSEKLAFTMGLLFLPPNAPIRIMKNLRICGDCHSFMKLASKFFCRDVIVRDTNRFHHFKN 629
Query: 592 GLCSCRDYW 600
G CSC D+W
Sbjct: 630 GCCSCGDFW 638
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/331 (23%), Positives = 148/331 (44%), Gaps = 30/331 (9%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV----VSWTVMLGGFIRDSRIDDA 56
MP R++VSW M+ + G EA L QM + + + +L + +
Sbjct: 125 MPSRSLVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSEC 184
Query: 57 RRL--FDMMPEKD--VVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+ L F + D V T ++ Y + G + + +F+ MP ++V++W++M +GYV N
Sbjct: 185 QLLHAFAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQN 244
Query: 113 NRIDVARKLFEVMPEKNEVSWTAMLMGYTQC----------GRIQDAWELFKAMPMKSVV 162
+ A LF E + LM C G+ +A L K+ ++
Sbjct: 245 EMYEQALALFRKAWETG-LKHDQFLMSSVICACAGLAAMIEGKQVNAL-LSKSGFCSNIF 302
Query: 163 ASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEG 222
++S+I + G ++++ VF + +++ W+ MI R LEV+ LF MQ+ G
Sbjct: 303 VASSLIDMYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQQMG 362
Query: 223 VRVNFPSLISVLSVCASLASLDHGRQVHAQLVR-CQFDVDVYVASVLITMYIKCGELVKG 281
+ N + +SVLS C + + G++ + + +V+ S ++ + G++ +
Sbjct: 363 LSPNDVTFVSVLSACGHMGLVKKGQKYFDLMTKEHHLAPNVFHYSCMVDTLSRAGQIFEA 422
Query: 282 -----KLIFDNFASKDIVMWNSIISGYAQYG 307
KL F+ AS MW S+++ +G
Sbjct: 423 YDLISKLPFNASAS----MWGSLLASCRTHG 449
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 85/170 (50%), Gaps = 2/170 (1%)
Query: 233 VLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKD 292
+L +CA L G+ HAQ++ D+ +++LI MY KCG + + +FD S+
Sbjct: 70 ILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSRS 129
Query: 293 IVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFE 352
+V WN++I Q G ++L + +M G + T+ VL AC+ + E ++
Sbjct: 130 LVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSEC-QLLH 188
Query: 353 SMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSL 402
+ K ++ ++D+ + G ++DA+ + E+MP + + W S+
Sbjct: 189 AFAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMP-DRSVVTWSSM 237
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 107/233 (45%), Gaps = 21/233 (9%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLF---WQMPEKN-------VVSWTVMLGGFIRD 50
MP+R+VV+W++M GYV+ M +A LF W+ K+ V+ L I
Sbjct: 226 MPDRSVVTWSSMAAGYVQNEMYEQALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEG 285
Query: 51 SRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYV 110
+++ L ++ ++++ Y + G ++E ++F ++ K+NV+ W MISG
Sbjct: 286 KQVNAL--LSKSGFCSNIFVASSLIDMYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLS 343
Query: 111 NNNRIDVARKLFEVMPE----KNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASN- 165
+ R LFE M + N+V++ ++L G ++ + F M + +A N
Sbjct: 344 RHARSLEVMILFEKMQQMGLSPNDVTFVSVLSACGHMGLVKKGQKYFDLMTKEHHLAPNV 403
Query: 166 ----SMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDL 214
M+ L + G++ +A + ++ A+ G + R LE+ ++
Sbjct: 404 FHYSCMVDTLSRAGQIFEAYDLISKLPFNASASMWGSLLASCRTHGNLELAEV 456
>gi|449467070|ref|XP_004151248.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 617
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 203/461 (44%), Positives = 294/461 (63%), Gaps = 1/461 (0%)
Query: 140 YTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMI 199
Y CG I A ++F MP + V+ N MI L + G+ + A +F +M E++ +W+ MI
Sbjct: 158 YALCGEIGVARKVFDKMPQRDVITWNIMIARLVKMGDAEGAYKLFAEMPERNVRSWTSMI 217
Query: 200 KVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFD 259
Y + G E IDLF M+ G+ N ++++VL CA + +L GR++H R ++
Sbjct: 218 GGYAQCGKSKEAIDLFLEMEDAGLLPNEVTVVAVLVACADMGNLVLGRRIHDFSNRSGYE 277
Query: 260 VDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEM 319
++ V + LI MY+KCG L IFDN + +V W+++I+G A +G E +L +F++M
Sbjct: 278 KNIRVCNTLIDMYVKCGCLEDACRIFDNMEERTVVSWSAMIAGLAAHGRAEDALALFNKM 337
Query: 320 FSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQ 379
++GV P+ VT +G+L ACS+ G V++GR+ F SM Y + P+ EHY CMVDL RAG
Sbjct: 338 INTGVKPNAVTFIGILHACSHMGMVEKGRKYFASMTRDYGIVPRIEHYGCMVDLFSRAGL 397
Query: 380 VEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNI 439
+++A + I MP P+ ++WG+LLG C+ H + LAE A + L +L+P N G Y++LSNI
Sbjct: 398 LQEAHEFIMNMPIAPNGVVWGALLGGCKVHKNIKLAEEATRHLSKLDPLNDGYYVVLSNI 457
Query: 440 YASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEK 499
YA GR+ DVA +RK MR R V K PG S I VE V+ F D +HP+ I + EK
Sbjct: 458 YAEAGRWEDVARVRKLMRDRGVKKTPGWSSIMVEGVVYNFVAGD-DTHPQTEEIFQTWEK 516
Query: 500 IGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRV 559
+ ++ GY P++S VL D++E++K L HSEKLAV +GL+K G IR+MKNLRV
Sbjct: 517 LLQRMKLKGYVPNTSVVLLDMEEDQKEKFLYRHSEKLAVVFGLIKTTPGTVIRIMKNLRV 576
Query: 560 CGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
C DCH+A+K+IS V REI++RD NRFH FK+G CSC DYW
Sbjct: 577 CEDCHAALKIISVVSTREIVVRDRNRFHCFKNGSCSCGDYW 617
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 133/298 (44%), Gaps = 49/298 (16%)
Query: 6 VVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRD-SRIDDAR--RLFDM 62
V W +R + E +A +LF+++ E ++ ++ SR+ D R ++
Sbjct: 78 VTHWNTCLRSFAEGDSPADAISLFYRLREFDISPDHYTCSFVLKACSRLLDVRNGKIVHG 137
Query: 63 MPEKDVVAQTNMVLG------YCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRID 116
EK + Q+NM L Y G + R++FD+MP+++VI+W MI+ V +
Sbjct: 138 YVEK-LGLQSNMFLQNMIVHLYALCGEIGVARKVFDKMPQRDVITWNIMIARLVKMGDAE 196
Query: 117 VARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMP------------------- 157
A KLF MPE+N SWT+M+ GY QCG+ ++A +LF M
Sbjct: 197 GAYKLFAEMPERNVRSWTSMIGGYAQCGKSKEAIDLFLEMEDAGLLPNEVTVVAVLVACA 256
Query: 158 --------------------MKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSG 197
K++ N++I + G ++ A +FD M E+ +WS
Sbjct: 257 DMGNLVLGRRIHDFSNRSGYEKNIRVCNTLIDMYVKCGCLEDACRIFDNMEERTVVSWSA 316
Query: 198 MIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVR 255
MI G + + LF M GV+ N + I +L C+ + ++ GR+ A + R
Sbjct: 317 MIAGLAAHGRAEDALALFNKMINTGVKPNAVTFIGILHACSHMGMVEKGRKYFASMTR 374
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/294 (22%), Positives = 135/294 (45%), Gaps = 36/294 (12%)
Query: 174 NGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISV 233
N A+++F + + W+ ++ + + I LF +++ + + + V
Sbjct: 60 NSSFSYAKLIFQLLDASEVTHWNTCLRSFAEGDSPADAISLFYRLREFDISPDHYTCSFV 119
Query: 234 LSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDI 293
L C+ L + +G+ VH + + ++++ ++++ +Y CGE+ + +FD +D+
Sbjct: 120 LKACSRLLDVRNGKIVHGYVEKLGLQSNMFLQNMIVHLYALCGEIGVARKVFDKMPQRDV 179
Query: 294 VMWN-------------------------------SIISGYAQYGLGEKSLKVFHEMFSS 322
+ WN S+I GYAQ G ++++ +F EM +
Sbjct: 180 ITWNIMIARLVKMGDAEGAYKLFAEMPERNVRSWTSMIGGYAQCGKSKEAIDLFLEMEDA 239
Query: 323 GVMPDDVTLVGVLSACSYTGKVKEGREIFE-SMKSKYLVEPKTEHYACMVDLLGRAGQVE 381
G++P++VT+V VL AC+ G + GR I + S +S Y E ++D+ + G +E
Sbjct: 240 GLLPNEVTVVAVLVACADMGNLVLGRRIHDFSNRSGY--EKNIRVCNTLIDMYVKCGCLE 297
Query: 382 DAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPK-NAGPYI 434
DA ++ + M E + W +++ H + + A K++ K NA +I
Sbjct: 298 DACRIFDNME-ERTVVSWSAMIAGLAAHGRAEDALALFNKMINTGVKPNAVTFI 350
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 99/199 (49%), Gaps = 12/199 (6%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MP+R+V++W M+ V+ G A LF +MPE+NV SWT M+GG+ + + +A LF
Sbjct: 174 MPQRDVITWNIMIARLVKMGDAEGAYKLFAEMPERNVRSWTSMIGGYAQCGKSKEAIDLF 233
Query: 61 DMMPEKDVVAQTNMVLGY---CQD-GRVDEGREIFDEMPK----KNVISWTTMISGYVNN 112
M + ++ V+ C D G + GR I D + KN+ T+I YV
Sbjct: 234 LEMEDAGLLPNEVTVVAVLVACADMGNLVLGRRIHDFSNRSGYEKNIRVCNTLIDMYVKC 293
Query: 113 NRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGL- 171
++ A ++F+ M E+ VSW+AM+ G GR +DA LF M V + +G+
Sbjct: 294 GCLEDACRIFDNMEERTVVSWSAMIAGLAAHGRAEDALALFNKMINTGVKPNAVTFIGIL 353
Query: 172 ---GQNGEVQKARVVFDQM 187
G V+K R F M
Sbjct: 354 HACSHMGMVEKGRKYFASM 372
>gi|414884091|tpg|DAA60105.1| TPA: hypothetical protein ZEAMMB73_697281 [Zea mays]
Length = 734
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 224/651 (34%), Positives = 345/651 (52%), Gaps = 53/651 (8%)
Query: 2 PERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEK--NVVSWTVMLGGFIRD----SRIDD 55
P R++ +WT+++ G EG + F +M ++ +L G +R ++
Sbjct: 85 PTRSLPAWTSIISGCAREGRHADGMRAFAEMLDECGATAPNAFVLAGVLRCCAGLGDVES 144
Query: 56 ARRLFDMMPEKDV---VAQTNMVLG-YCQDGRVDEGREIFDEMPKKNVISWTTMISGYVN 111
RR+ + V V N VL Y + G R F M +K+ SW +I +
Sbjct: 145 GRRIHGWILRSGVCPDVVLCNAVLDMYAKCGDHGRARRAFGAMAQKDATSWNIVIRACLQ 204
Query: 112 NNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASN---SMI 168
+ + A +LF+ ++ SW ++ G + G +A + M V SN SM+
Sbjct: 205 DGDLVGATQLFDESSLRDVSSWNTIVSGLMRHGHTTEALGRLQQMVRAGVTFSNYTYSMV 264
Query: 169 LGLG------------------------------------QNGEVQKARVVFDQ---MRE 189
L + GE++ A +FD+ E
Sbjct: 265 FALAGLLSSRDLGRQLHGRVVVAVLEEDAFVGCSLMDMYCKCGEMESALSIFDRWSDFTE 324
Query: 190 KDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQV 249
WS M+ Y + G E E ++ F M +EGV L SV S CA+ ++ GRQV
Sbjct: 325 DRQFAWSTMVAGYVQNGREEEALEFFRRMLREGVPAGQFILTSVASACANAGMVEQGRQV 384
Query: 250 HAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLG 309
H + + D +AS ++ MY K G L IF + +K++ +W +++ YA +G G
Sbjct: 385 HGFVEKLGHRFDAPLASAIVDMYSKSGSLEDACRIFRSAQTKNVALWTTMLCSYASHGQG 444
Query: 310 EKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYAC 369
+L++F M + +MP+++TLV VLSACS++G V +G F M+ +Y + P TEHY C
Sbjct: 445 RMALEIFSRMKAEKIMPNEITLVAVLSACSHSGLVSDGYHYFNLMQEEYGIVPNTEHYNC 504
Query: 370 MVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKN 429
MVDL GRAG ++ A IE +A++W +LL ACR H ++ A++A++KL+QLE +
Sbjct: 505 MVDLYGRAGLLDKAKNFIEENKISHEAVVWKTLLSACRLHKHIEYAQLASEKLVQLEQYD 564
Query: 430 AGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPE 489
AG Y+L+SN+YA+ ++ D +LR +M++R V K PG SWI ++ VH F D SHP
Sbjct: 565 AGSYVLMSNMYATNNKWLDTFKLRSSMKERRVRKQPGQSWIHLKNVVHRFVALD-TSHPR 623
Query: 490 HPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGV 549
I LEK+ L+E GY + V+HD++EE++ SL++HSEKLA+A+G++ P G
Sbjct: 624 SAEIYAYLEKLMERLKEMGYTSRTDLVVHDIEEEQRETSLKFHSEKLAIAFGIISTPVGT 683
Query: 550 PIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
+R+ KNLRVC DCH AIK I++ REI++RD RFHHFKDG CSC D+W
Sbjct: 684 ALRIFKNLRVCEDCHEAIKFITRATDREIVVRDLYRFHHFKDGQCSCEDFW 734
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 96/376 (25%), Positives = 175/376 (46%), Gaps = 27/376 (7%)
Query: 53 IDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+ +A R+FD P + + A T+++ G ++GR +G F EM + T + +V
Sbjct: 74 LHNAHRVFDGTPTRSLPAWTSIISGCAREGRHADGMRAFAEMLDE---CGATAPNAFVLA 130
Query: 113 NRIDVARKLFEVMPEKNEVSW-------------TAMLMGYTQCGRIQDAWELFKAMPMK 159
+ L +V + W A+L Y +CG A F AM K
Sbjct: 131 GVLRCCAGLGDVESGRRIHGWILRSGVCPDVVLCNAVLDMYAKCGDHGRARRAFGAMAQK 190
Query: 160 SVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQ 219
+ N +I Q+G++ A +FD+ +D ++W+ ++ R G+ E + M
Sbjct: 191 DATSWNIVIRACLQDGDLVGATQLFDESSLRDVSSWNTIVSGLMRHGHTTEALGRLQQMV 250
Query: 220 KEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELV 279
+ GV + + V ++ L+S D GRQ+H ++V + D +V L+ MY KCGE+
Sbjct: 251 RAGVTFSNYTYSMVFALAGLLSSRDLGRQLHGRVVVAVLEEDAFVGCSLMDMYCKCGEME 310
Query: 280 KGKLIFD---NFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLS 336
IFD +F W+++++GY Q G E++L+ F M GV L V S
Sbjct: 311 SALSIFDRWSDFTEDRQFAWSTMVAGYVQNGREEEALEFFRRMLREGVPAGQFILTSVAS 370
Query: 337 ACSYTGKVKEGREIF---ESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFE 393
AC+ G V++GR++ E + ++ + +VD+ ++G +EDA ++ +
Sbjct: 371 ACANAGMVEQGRQVHGFVEKLGHRF----DAPLASAIVDMYSKSGSLEDACRIFRSAQ-T 425
Query: 394 PDAIIWGSLLGACRTH 409
+ +W ++L + +H
Sbjct: 426 KNVALWTTMLCSYASH 441
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 75/361 (20%), Positives = 152/361 (42%), Gaps = 66/361 (18%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDA-RRL 59
M +++ SW ++R +++G + A LF + ++V SW ++ G +R +A RL
Sbjct: 187 MAQKDATSWNIVIRACLQDGDLVGATQLFDESSLRDVSSWNTIVSGLMRHGHTTEALGRL 246
Query: 60 FDMMP--------------------------------------EKDVVAQTNMVLGYCQD 81
M+ E+D +++ YC+
Sbjct: 247 QQMVRAGVTFSNYTYSMVFALAGLLSSRDLGRQLHGRVVVAVLEEDAFVGCSLMDMYCKC 306
Query: 82 GRVDEGREIFD---EMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEK---------N 129
G ++ IFD + + +W+TM++GYV N R + A + F M +
Sbjct: 307 GEMESALSIFDRWSDFTEDRQFAWSTMVAGYVQNGREEEALEFFRRMLREGVPAGQFILT 366
Query: 130 EVSWTAMLMGYTQCGR-----IQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVF 184
V+ G + GR ++ F A P+ S + ++G ++ A +F
Sbjct: 367 SVASACANAGMVEQGRQVHGFVEKLGHRFDA-PLASAIVDM-----YSKSGSLEDACRIF 420
Query: 185 DQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLD 244
+ K+ A W+ M+ Y G +++F+ M+ E + N +L++VLS C+ +
Sbjct: 421 RSAQTKNVALWTTMLCSYASHGQGRMALEIFSRMKAEKIMPNEITLVAVLSACSHSGLVS 480
Query: 245 HGRQVHAQLVRCQFDV--DVYVASVLITMYIKCGELVKGK-LIFDNFASKDIVMWNSIIS 301
G + L++ ++ + + + ++ +Y + G L K K I +N S + V+W +++S
Sbjct: 481 DGYH-YFNLMQEEYGIVPNTEHYNCMVDLYGRAGLLDKAKNFIEENKISHEAVVWKTLLS 539
Query: 302 G 302
Sbjct: 540 A 540
>gi|297814704|ref|XP_002875235.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321073|gb|EFH51494.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 579
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 209/533 (39%), Positives = 311/533 (58%), Gaps = 45/533 (8%)
Query: 103 TTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPM---- 158
+I+ YV N ++ A +LF+ MP++N +SWT M+ Y++C Q A EL M
Sbjct: 52 NVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDGVR 111
Query: 159 --------------------------------KSVVASNSMILGLGQNGEVQKARVVFDQ 186
V +++I + GE + A VFD+
Sbjct: 112 PNVYTYSSVLRACNGMSDVRMLHCGIIKEGLESDVYVRSALIDVFAKLGEPEDALSVFDE 171
Query: 187 MREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHG 246
M D W+ +I + + ++LF M++ G +L SVL C LA L+ G
Sbjct: 172 MVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELG 231
Query: 247 RQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQY 306
Q H +V+ +D D+ + + L+ MY KCG L + +F+ +D++ W+++ISG AQ
Sbjct: 232 MQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDARRVFNQMKERDVITWSTMISGLAQN 289
Query: 307 GLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEH 366
G +++LK+F M SSG P+ +T+VGVL ACS+ G +++G F SMK Y + P EH
Sbjct: 290 GYSQEALKLFELMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGINPGREH 349
Query: 367 YACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLE 426
Y CM+DLLG+AG+++DA+KL+ M EPDA+ W +LLGACR + LAE AAKK++ L+
Sbjct: 350 YGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALD 409
Query: 427 PKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVS 486
P++AG Y +LSNIYA+ ++ V E+RK MR + K PGCSWIEV K++H F +
Sbjct: 410 PEDAGTYTVLSNIYANSQKWDSVEEIRKRMRDIGIKKEPGCSWIEVNKQIHAFI----IG 465
Query: 487 HPEHPMIMRMLEKIGGLLRE---AGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLV 543
HP I+ + +K+ L+ GY P+++FVL D++ E+ SLR+HSEKLA+A+GL+
Sbjct: 466 DESHPQIVEVNKKLNQLIHRLIGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAFGLM 525
Query: 544 KLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSC 596
LP IR+ KNLR+CGDCH KL SK+ R I++RD R+HHF+DG CSC
Sbjct: 526 TLPSEKVIRIRKNLRICGDCHVFCKLASKLENRNIVIRDPIRYHHFQDGKCSC 578
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 129/279 (46%), Gaps = 42/279 (15%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMP----- 64
++ YV+ ++ +A LF QMP++NV+SWT M+ + + A L +M
Sbjct: 52 NVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDGVR 111
Query: 65 -------------------------------EKDVVAQTNMVLGYCQDGRVDEGREIFDE 93
E DV ++ ++ + + G ++ +FDE
Sbjct: 112 PNVYTYSSVLRACNGMSDVRMLHCGIIKEGLESDVYVRSALIDVFAKLGEPEDALSVFDE 171
Query: 94 MPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKN----EVSWTAMLMGYTQCGRIQDA 149
M + I W ++I G+ N+R DVA +LF+ M + + T++L T ++
Sbjct: 172 MVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELG 231
Query: 150 WELFKAMPM--KSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGY 207
+ + + ++ +N+++ + G ++ AR VF+QM+E+D TWS MI + GY
Sbjct: 232 MQAHVHIVKYDQDLILNNALVDMYCKCGSLEDARRVFNQMKERDVITWSTMISGLAQNGY 291
Query: 208 ELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHG 246
E + LF LM+ G + N+ +++ VL C+ L+ G
Sbjct: 292 SQEALKLFELMKSSGTKPNYITIVGVLFACSHAGLLEDG 330
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 113/246 (45%), Gaps = 51/246 (20%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDM 62
E +V +A++ + + G +A ++F +M + + W ++GGF ++SR D A LF
Sbjct: 143 ESDVYVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKR 202
Query: 63 MP-------------------------------------EKDVVAQTNMVLGYCQDGRVD 85
M ++D++ +V YC+ G ++
Sbjct: 203 MKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYDQDLILNNALVDMYCKCGSLE 262
Query: 86 EGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVM----PEKNEVSWTAMLMGYT 141
+ R +F++M +++VI+W+TMISG N A KLFE+M + N ++ +L +
Sbjct: 263 DARRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFELMKSSGTKPNYITIVGVLFACS 322
Query: 142 QCGRIQDAWELFKAMPMKSVVASN-------SMILGLGQNGEVQKARVVFDQMR-EKDDA 193
G ++D W F++ MK + N MI LG+ G++ A + ++M E D
Sbjct: 323 HAGLLEDGWYYFRS--MKKLYGINPGREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAV 380
Query: 194 TWSGMI 199
TW ++
Sbjct: 381 TWRTLL 386
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 98/206 (47%), Gaps = 21/206 (10%)
Query: 218 MQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGE 277
+Q G+ + + ++ C S ++ G + L +++ +VLI MY+K
Sbjct: 4 LQSHGLWADSATYSELIKCCLSHRAVHEGNLICRHLYFNGHQPMMFLVNVLINMYVKFNL 63
Query: 278 LVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSA 337
L +FD ++++ W ++IS Y++ + +K+L++ M GV P+ T VL A
Sbjct: 64 LNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDGVRPNVYTYSSVLRA 123
Query: 338 CS--------YTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEA 389
C+ + G +KEG E ++S ++D+ + G+ EDA+ + +
Sbjct: 124 CNGMSDVRMLHCGIIKEGLESDVYVRSA------------LIDVFAKLGEPEDALSVFDE 171
Query: 390 MPFEPDAIIWGSLLGACRTHMKLDLA 415
M DAI+W S++G + + D+A
Sbjct: 172 M-VTGDAIVWNSIIGGFAQNSRSDVA 196
>gi|297833028|ref|XP_002884396.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330236|gb|EFH60655.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 882
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 245/717 (34%), Positives = 381/717 (53%), Gaps = 118/717 (16%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLF------WQMPEKNVVSWTV------------ 42
MP R++VSW +++ GY G EA ++ W +P+ VS +
Sbjct: 167 MPVRDLVSWNSLISGYSSHGYYEEALEIYHELRNSWIVPDSFTVSSVLPAFANLLVVKQG 226
Query: 43 ---------------------MLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQD 81
+L +++ SR DARR+FD M +D V M+ GY +
Sbjct: 227 QGLHGFTLKSGVNSVSVVNNGLLAMYLKFSRPTDARRVFDEMVVRDSVTYNTMICGYLKL 286
Query: 82 GRVDEGREIFDE---MPKKNVISWTTMI---------------------SGYV-----NN 112
V+E ++F E K ++++ T+++ +G+V N
Sbjct: 287 EMVEESVKMFLENLDQFKPDILTVTSVLCACGHLRDLSLAKYIYNYMLRAGFVLESTVKN 346
Query: 113 NRIDV---------ARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAM------- 156
IDV AR +F M K+ VSW +++ GY Q G + +A +LFK M
Sbjct: 347 ILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQA 406
Query: 157 ---------------------------PMKSVV-----ASNSMILGLGQNGEVQKARVVF 184
+KS + SN++I + GEV + +F
Sbjct: 407 DHITYLMLISLSTRLADLKFGKGLHSNGIKSGIYIDLSVSNALIDMYAKCGEVGDSLKIF 466
Query: 185 DQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLD 244
+ M D TW+ +I R G + + T M+K V + + + L +CASLA+
Sbjct: 467 NSMGTLDTVTWNTVISACVRFGDFATGLQVTTQMRKNKVVPDMATFLVTLPMCASLAAKR 526
Query: 245 HGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYA 304
G+++H L+R ++ ++ + + LI MY KCG L +F+ + +D+V W +I Y
Sbjct: 527 LGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLESSFRVFERMSRRDVVTWTGMIYAYG 586
Query: 305 QYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKT 364
YG GEK+L+ F +M SG++PD V + ++ ACS++G V++G FE MK+ Y ++P
Sbjct: 587 MYGEGEKALESFVDMEKSGIVPDSVVFIALIYACSHSGLVEKGLACFEKMKTHYKIDPMI 646
Query: 365 EHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQ 424
EHYAC+VDLL R+ ++ A + I+AMP EPDA IW S+L ACRT ++ AE ++++++
Sbjct: 647 EHYACVVDLLSRSQKISKAEEFIQAMPIEPDASIWASVLRACRTSGDMETAERVSRRIIE 706
Query: 425 LEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDC 484
L P + G IL SN YA+ ++ V+ +RK++R +++ K PG SWIE+ KKVH+F D
Sbjct: 707 LNPDDPGYSILASNAYAALRKWDKVSLIRKSVRDKHIKKNPGYSWIEIGKKVHVFCSGD- 765
Query: 485 VSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRY-HSEKLAVAYGLV 543
S P+ I + LE + L+ + GY PDS V +++EEE+ L HSE+LA+A+GL+
Sbjct: 766 DSAPQSEAIHKSLEILYSLMAKEGYIPDSREVSQNLEEEEEKRRLICGHSERLAIAFGLL 825
Query: 544 KLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
G P++VMKNLRVC DCH KLISK++GREI++RDANRFH FKDG+CSC+D W
Sbjct: 826 NTEPGTPLQVMKNLRVCSDCHEVTKLISKIVGREILVRDANRFHLFKDGICSCKDRW 882
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 105/424 (24%), Positives = 212/424 (50%), Gaps = 25/424 (5%)
Query: 2 PERNVVSWTAMVRGYVEEGMITEAGTLFWQM------PEKNVVSWTVMLGGFIRDSRIDD 55
P +NV W +++R + + G +A + ++ P+K + + D+ + D
Sbjct: 67 PAKNVYIWNSIIRAFSKNGWFPKALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGD 126
Query: 56 A--RRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNN 113
+++ +M E D+ +V Y + G + R++FDEMP ++++SW ++ISGY ++
Sbjct: 127 LVYKQILEMGFESDLYVGNALVDMYSRMGLLSRARQVFDEMPVRDLVSWNSLISGYSSHG 186
Query: 114 RIDVARKLFE------VMPEKNEVSWT----AMLMGYTQCGRIQDAWELFKAMPMKSVVA 163
+ A +++ ++P+ VS A L+ Q G+ + L + SVV
Sbjct: 187 YYEEALEIYHELRNSWIVPDSFTVSSVLPAFANLLVVKQ-GQGLHGFTLKSGVNSVSVV- 244
Query: 164 SNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGV 223
+N ++ + AR VFD+M +D T++ MI Y + E + +F L +
Sbjct: 245 NNGLLAMYLKFSRPTDARRVFDEMVVRDSVTYNTMICGYLKLEMVEESVKMF-LENLDQF 303
Query: 224 RVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKL 283
+ + ++ SVL C L L + ++ ++R F ++ V ++LI +Y KCG+++ +
Sbjct: 304 KPDILTVTSVLCACGHLRDLSLAKYIYNYMLRAGFVLESTVKNILIDVYAKCGDMITARD 363
Query: 284 IFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGK 343
+F++ KD V WNSIISGY Q G +++K+F M D +T + ++S +
Sbjct: 364 VFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISLSTRLAD 423
Query: 344 VKEGREIFES-MKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSL 402
+K G+ + + +KS ++ + ++D+ + G+V D++K+ +M D + W ++
Sbjct: 424 LKFGKGLHSNGIKSGIYIDLSVSN--ALIDMYAKCGEVGDSLKIFNSMG-TLDTVTWNTV 480
Query: 403 LGAC 406
+ AC
Sbjct: 481 ISAC 484
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 139/261 (53%), Gaps = 5/261 (1%)
Query: 190 KDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQV 249
K+ W+ +I+ + + G+ + ++ + +++ V + + SV+ CA L + G V
Sbjct: 69 KNVYIWNSIIRAFSKNGWFPKALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLV 128
Query: 250 HAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLG 309
+ Q++ F+ D+YV + L+ MY + G L + + +FD +D+V WNS+ISGY+ +G
Sbjct: 129 YKQILEMGFESDLYVGNALVDMYSRMGLLSRARQVFDEMPVRDLVSWNSLISGYSSHGYY 188
Query: 310 EKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYAC 369
E++L+++HE+ +S ++PD T+ VL A + VK+G+ + K V +
Sbjct: 189 EEALEIYHELRNSWIVPDSFTVSSVLPAFANLLVVKQGQGL-HGFTLKSGVNSVSVVNNG 247
Query: 370 MVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKN 429
++ + + + DA ++ + M D++ + +++ ++KL++ E + K L+ +
Sbjct: 248 LLAMYLKFSRPTDARRVFDEMVVR-DSVTYNTMICG---YLKLEMVEESVKMFLENLDQF 303
Query: 430 AGPYILLSNIYASQGRFHDVA 450
+ ++++ + G D++
Sbjct: 304 KPDILTVTSVLCACGHLRDLS 324
>gi|356550971|ref|XP_003543853.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Glycine max]
Length = 703
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 217/621 (34%), Positives = 363/621 (58%), Gaps = 25/621 (4%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPE-----KNVVSWTVMLGGFIRDSRIDD 55
M +RNVVSW+A++ GY+ +G + E LF + N +T++L R+ +
Sbjct: 87 MLQRNVVSWSALMMGYLHKGEVLEVLGLFRNLVSLDSAYPNEYIFTIVLSCCADSGRVKE 146
Query: 56 ARRLFDMMPEKDVV----AQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVN 111
++ + + ++ + ++ Y + VD +I D +P +V S+ +++S V
Sbjct: 147 GKQCHGYLLKSGLLLHQYVKNALIHMYSRCFHVDSAMQILDTVPGDDVFSYNSILSALVE 206
Query: 112 NNRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAW-------ELFKAMPMKS 160
+ A ++ + M ++ + V++ ++L C +I+D +L K +
Sbjct: 207 SGCRGEAAQVLKRMVDECVIWDSVTYVSVL---GLCAQIRDLQLGLQIHAQLLKTGLVFD 263
Query: 161 VVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQK 220
V S+++I G+ GEV AR FD +R+++ W+ ++ Y + G+ E ++LFT M+
Sbjct: 264 VFVSSTLIDTYGKCGEVLNARKQFDGLRDRNVVAWTAVLTAYLQNGHFEETLNLFTKMEL 323
Query: 221 EGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVK 280
E R N + +L+ CASL +L +G +H ++V F + V + LI MY K G +
Sbjct: 324 EDTRPNEFTFAVLLNACASLVALAYGDLLHGRIVMSGFKNHLIVGNALINMYSKSGNIDS 383
Query: 281 GKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSY 340
+F N ++D++ WN++I GY+ +GLG+++L VF +M S+G P+ VT +GVLSAC +
Sbjct: 384 SYNVFSNMMNRDVITWNAMICGYSHHGLGKQALLVFQDMMSAGECPNYVTFIGVLSACVH 443
Query: 341 TGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMP-FEPDAIIW 399
V+EG F+ + K+ VEP EHY CMV LLGRAG +++A ++ + D + W
Sbjct: 444 LALVQEGFYYFDQIMKKFDVEPGLEHYTCMVALLGRAGLLDEAENFMKTTTQVKWDVVAW 503
Query: 400 GSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKR 459
+LL AC H +L + + ++Q++P + G Y LLSN++A ++ V ++RK M++R
Sbjct: 504 RTLLNACHIHRNYNLGKQITETVIQMDPHDVGTYTLLSNMHAKARKWDGVVKIRKLMKER 563
Query: 460 NVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHD 519
N+ K PG SW+++ H+F +HPE I ++++ +++ GY PD VLHD
Sbjct: 564 NIKKEPGASWLDIRNNTHVFVSEGS-NHPESTQIFEKVQQLLAMIKPLGYAPDVGVVLHD 622
Query: 520 VDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREII 579
V++E+K L +HSEKLA+AYGL+K+P PIR++KNLR+C DCH A+KLISK R II
Sbjct: 623 VEDEQKEGYLSHHSEKLALAYGLMKIPPPGPIRIIKNLRMCDDCHIAVKLISKATNRLII 682
Query: 580 LRDANRFHHFKDGLCSCRDYW 600
+RDANRFHHF++GLC+C D+W
Sbjct: 683 VRDANRFHHFREGLCTCNDHW 703
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 84/359 (23%), Positives = 168/359 (46%), Gaps = 21/359 (5%)
Query: 65 EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEV 124
+ D+ +++ Y + G+ R++FD M ++NV+SW+ ++ GY++ + LF
Sbjct: 58 DSDITQINSLINLYSKCGQSKCARKLFDRMLQRNVVSWSALMMGYLHKGEVLEVLGLFRN 117
Query: 125 MPE-----KNEVSWTAMLMGYTQCGRIQDAWE----LFKAMPMKSVVASNSMILGLGQNG 175
+ NE +T +L GR+++ + L K+ + N++I +
Sbjct: 118 LVSLDSAYPNEYIFTIVLSCCADSGRVKEGKQCHGYLLKSGLLLHQYVKNALIHMYSRCF 177
Query: 176 EVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLS 235
V A + D + D +++ ++ G E + M E V + + +SVL
Sbjct: 178 HVDSAMQILDTVPGDDVFSYNSILSALVESGCRGEAAQVLKRMVDECVIWDSVTYVSVLG 237
Query: 236 VCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVM 295
+CA + L G Q+HAQL++ DV+V+S LI Y KCGE++ + FD +++V
Sbjct: 238 LCAQIRDLQLGLQIHAQLLKTGLVFDVFVSSTLIDTYGKCGEVLNARKQFDGLRDRNVVA 297
Query: 296 WNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYT-----GKVKEGREI 350
W ++++ Y Q G E++L +F +M P++ T +L+AC+ G + GR +
Sbjct: 298 WTAVLTAYLQNGHFEETLNLFTKMELEDTRPNEFTFAVLLNACASLVALAYGDLLHGRIV 357
Query: 351 FESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTH 409
K+ +V ++++ ++G ++ + + M D I W +++ H
Sbjct: 358 MSGFKNHLIVGNA------LINMYSKSGNIDSSYNVFSNM-MNRDVITWNAMICGYSHH 409
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 98/185 (52%), Gaps = 8/185 (4%)
Query: 226 NFPSLISVLSVCASLASLDHGRQVHAQLV---RCQFDVDVYVASVLITMYIKCGELVKGK 282
+ ++++L A+ SL G+ +HAQLV + D D+ + LI +Y KCG+ +
Sbjct: 22 SLKEVVNLLKFSATAKSLRFGKTIHAQLVVRNQTSKDSDITQINSLINLYSKCGQSKCAR 81
Query: 283 LIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFS-SGVMPDDVTLVGVLSACSYT 341
+FD +++V W++++ GY G + L +F + S P++ VLS C+ +
Sbjct: 82 KLFDRMLQRNVVSWSALMMGYLHKGEVLEVLGLFRNLVSLDSAYPNEYIFTIVLSCCADS 141
Query: 342 GKVKEGREIFES-MKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWG 400
G+VKEG++ +KS L+ ++ ++ + R V+ AM++++ +P + D +
Sbjct: 142 GRVKEGKQCHGYLLKSGLLLHQYVKN--ALIHMYSRCFHVDSAMQILDTVPGD-DVFSYN 198
Query: 401 SLLGA 405
S+L A
Sbjct: 199 SILSA 203
>gi|302801035|ref|XP_002982274.1| hypothetical protein SELMODRAFT_116224 [Selaginella moellendorffii]
gi|300149866|gb|EFJ16519.1| hypothetical protein SELMODRAFT_116224 [Selaginella moellendorffii]
Length = 920
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 243/651 (37%), Positives = 351/651 (53%), Gaps = 56/651 (8%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMP 64
+VV TA+V Y G + E+ +F M +N VSW M+ F + A ++ M
Sbjct: 271 DVVVATALVTMYGRCGSVDESIAVFEAMAVRNHVSWNAMIAAFAQCGHRSAAFAIYWRMQ 330
Query: 65 EK----DVVAQTNMVLGYCQDGRVDEGRE------IFDEMPKKNVISWTTMISGYVNNNR 114
++ + + + C D G I + +V+ T +++ Y +
Sbjct: 331 QEGFRPNKITFVTALKAACSSSSQDLGESAALHGWIACAGLEGDVMVGTALVTMYGSTGA 390
Query: 115 IDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVA----------- 163
ID AR F+ +P KN VSW AML Y GR ++A ELF AM +S+
Sbjct: 391 IDRARAAFDAIPAKNIVSWNAMLTAYGDNGRAREAMELFAAMKRQSLAPNKVSYLAVLGC 450
Query: 164 --------------------------SNSMILGLGQNGEVQKARVVFDQMREKDDATWSG 197
+N ++ ++G +++A FD KD +W+
Sbjct: 451 CEDVSEARSIHAEVVGNGLFAQESSIANGVVRMFARSGSLEEAVAAFDATVVKDSVSWNT 510
Query: 198 MIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQL-VRC 256
+ + I F MQ EG R + +L+SV+ VCA L +L+ GR + QL
Sbjct: 511 KVAALSAREDLHGAITAFYTMQHEGFRPDKFTLVSVVDVCADLGTLELGRSIQQQLSAAI 570
Query: 257 QFDVDVYVASVLITMYIKCGELV-KGKLIFDNFAS--KDIVMWNSIISGYAQYGLGEKSL 313
+ + DV VAS ++ M KCG V + + +F KD+V WN++I+ YAQ+G G K+L
Sbjct: 571 EVERDVVVASAVMNMVAKCGSSVDECERLFARMPDDRKDLVAWNTMIAAYAQHGHGRKAL 630
Query: 314 KVFHEMFS-SGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPK-TEHYACMV 371
K+F M S V PD T V VLS CS+ G V++G F + +E + EHYAC+V
Sbjct: 631 KLFRIMQQRSSVRPDSSTFVSVLSGCSHAGLVEDGIHCFFLAREVLGIEQQPVEHYACLV 690
Query: 372 DLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAG 431
D+LGR G + +A I MP D+++W SLLGAC ++ L+ E AA+ ++L ++
Sbjct: 691 DVLGRMGYLREAEDFIRKMPLPADSVVWTSLLGACSSYGDLEGGERAARAFIELYRSDSV 750
Query: 432 PYILLSNIYASQGRFHDVAELRKNMRKRNVIKP-PGCSWIEVEKKVHMFTGRDCVSHPEH 490
Y++LSNIYA+ GR+ D +R++M +R V K PG S I V+ +VH F RD SHP+
Sbjct: 751 GYVVLSNIYAAAGRWEDSIRVREDMAERRVKKRVPGKSSIVVKNRVHEFFARD-RSHPQS 809
Query: 491 PMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVP 550
I LE++ GL+REAGY PD+ VLHDV+EE+K L YHSEKLA+A+GL+ +P
Sbjct: 810 DAIYAELERLKGLIREAGYVPDTRLVLHDVEEEQKEQLLWYHSEKLAIAFGLISVPHRHS 869
Query: 551 IRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHF-KDGLCSCRDYW 600
IRV+KNLRVC DCH+A K I++V REI +RD NRFHHF KDG CSC DYW
Sbjct: 870 IRVIKNLRVCKDCHTATKFIARVTQREIAVRDCNRFHHFGKDGECSCGDYW 920
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 106/463 (22%), Positives = 204/463 (44%), Gaps = 62/463 (13%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSW-TVMLGGFIRDSRIDDA----R 57
ER++ TA++ Y + G + A +F ++ +++ W ++ D R D A R
Sbjct: 167 ERDLFVATALLDAYGKCGCVESALEVFSRIQVPDLICWNAAIMACAGNDERPDRALLLVR 226
Query: 58 RLF--DMMPEKDVVAQTNMVLGYCQD-GRVDEGREIFDEMPK----KNVISWTTMISGYV 110
R++ ++P + A +L C D + R I + + +V+ T +++ Y
Sbjct: 227 RMWLEGLLPNR---ASFVAILSSCGDHSSLPLARSIHARVEELGFLGDVVVATALVTMYG 283
Query: 111 NNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAM-------------- 156
+D + +FE M +N VSW AM+ + QCG A+ ++ M
Sbjct: 284 RCGSVDESIAVFEAMAVRNHVSWNAMIAAFAQCGHRSAAFAIYWRMQQEGFRPNKITFVT 343
Query: 157 PMKSVVASNSMILG---------------------------LGQNGEVQKARVVFDQMRE 189
+K+ +S+S LG G G + +AR FD +
Sbjct: 344 ALKAACSSSSQDLGESAALHGWIACAGLEGDVMVGTALVTMYGSTGAIDRARAAFDAIPA 403
Query: 190 KDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQV 249
K+ +W+ M+ Y G E ++LF M+++ + N S ++VL C ++ R +
Sbjct: 404 KNIVSWNAMLTAYGDNGRAREAMELFAAMKRQSLAPNKVSYLAVLGCCEDVS---EARSI 460
Query: 250 HAQLV-RCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGL 308
HA++V F + +A+ ++ M+ + G L + FD KD V WN+ ++ +
Sbjct: 461 HAEVVGNGLFAQESSIANGVVRMFARSGSLEEAVAAFDATVVKDSVSWNTKVAALSARED 520
Query: 309 GEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYA 368
++ F+ M G PD TLV V+ C+ G ++ GR I + + + VE +
Sbjct: 521 LHGAITAFYTMQHEGFRPDKFTLVSVVDVCADLGTLELGRSIQQQLSAAIEVERDVVVAS 580
Query: 369 CMVDLLGRAG-QVEDAMKLIEAMPFE-PDAIIWGSLLGACRTH 409
+++++ + G V++ +L MP + D + W +++ A H
Sbjct: 581 AVMNMVAKCGSSVDECERLFARMPDDRKDLVAWNTMIAAYAQH 623
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 110/240 (45%), Gaps = 19/240 (7%)
Query: 180 ARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCAS 239
A F +R + ATW+ +I + V DL+T M+ E N P+ +++++V +
Sbjct: 78 ANAAFSALRSRGIATWNTLIAA---QSSPAAVFDLYTRMKLEERAENRPNKLTIIAVLGA 134
Query: 240 LASLD-------------HGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFD 286
+AS D R VH + + D++VA+ L+ Y KCG + +F
Sbjct: 135 IASGDPSSSSSSRAPSIAQARIVHDDIRGSDLERDLFVATALLDAYGKCGCVESALEVFS 194
Query: 287 NFASKDIVMWNSIISGYAQYG-LGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVK 345
D++ WN+ I A +++L + M+ G++P+ + V +LS+C +
Sbjct: 195 RIQVPDLICWNAAIMACAGNDERPDRALLLVRRMWLEGLLPNRASFVAILSSCGDHSSLP 254
Query: 346 EGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
R I ++ + A +V + GR G V++++ + EAM + + W +++ A
Sbjct: 255 LARSIHARVEELGFLGDVVVATA-LVTMYGRCGSVDESIAVFEAMAVR-NHVSWNAMIAA 312
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 83/202 (41%), Gaps = 32/202 (15%)
Query: 225 VNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLI 284
+ +L +L C A L GRQ+H Q+V+ + + + L+ MY KC L
Sbjct: 22 IPIETLAGLLRRCIGDADLAQGRQLHRQIVKQGLARNDLLGNYLVQMYSKCRSLDDANAA 81
Query: 285 FDNFASKDIVMWNSIISG----------YAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGV 334
F S+ I WN++I+ Y + L E++ P+ +T++ V
Sbjct: 82 FSALRSRGIATWNTLIAAQSSPAAVFDLYTRMKLEERAEN----------RPNKLTIIAV 131
Query: 335 LSACSY----------TGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAM 384
L A + + + R + + ++ L E ++D G+ G VE A+
Sbjct: 132 LGAIASGDPSSSSSSRAPSIAQARIVHDDIRGSDL-ERDLFVATALLDAYGKCGCVESAL 190
Query: 385 KLIEAMPFEPDAIIWGSLLGAC 406
++ + PD I W + + AC
Sbjct: 191 EVFSRIQV-PDLICWNAAIMAC 211
>gi|359481040|ref|XP_002266469.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Vitis vinifera]
Length = 709
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 227/649 (34%), Positives = 344/649 (53%), Gaps = 62/649 (9%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQM------PEKNVVSWTVMLGGFIRDSRIDDAR- 57
++W +++R Y G+ + + F QM P+ NV + ++D R ++
Sbjct: 70 TTLAWKSIIRCYTSHGLFLHSLSFFIQMLASGKYPDHNVFPSVLKSCTLMKDLRFGESVH 129
Query: 58 ----RL---FDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYV 110
RL FD+ A NM + V+ +++FDE +V S S Y+
Sbjct: 130 GCIIRLGMGFDLYT---CNALMNMYSKFWSLEEVNTYKKVFDEGKTSDVYSKKEKESYYL 186
Query: 111 NNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDA----------------WELFK 154
+ RK+FE+MP+++ VSW ++ G Q G +DA + L
Sbjct: 187 GS-----LRKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSS 241
Query: 155 AMPM-----------------------KSVVASNSMILGLGQNGEVQKARVVFDQMREKD 191
+P+ V +S+I + V + VF + + D
Sbjct: 242 VLPIFAEYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHD 301
Query: 192 DATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHA 251
+W+ +I + G E + F M ++ N S S++ CA L +L G+Q+H
Sbjct: 302 GISWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHG 361
Query: 252 QLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEK 311
++R +FD +V++AS L+ MY KCG + + IFD D+V W ++I GYA +G
Sbjct: 362 YIIRSRFDGNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYD 421
Query: 312 SLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMV 371
++ +F M GV P+ V + VL+ACS+ G V E + F SM Y + P EHYA +
Sbjct: 422 AISLFKRMEVEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVA 481
Query: 372 DLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAG 431
DLLGR G++E+A + I M EP +W +LL ACR H ++LAE +KKL ++P+N G
Sbjct: 482 DLLGRVGRLEEAYEFISDMHIEPTGSVWSTLLAACRVHKNIELAEKVSKKLFTVDPQNIG 541
Query: 432 PYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHP 491
Y+LLSNIY++ GR+ D +LR MR + + K P CSWIE++ KVH F D SHP +
Sbjct: 542 AYVLLSNIYSAAGRWKDARKLRIAMRDKGMKKKPACSWIEIKNKVHAFVAGD-KSHPYYD 600
Query: 492 MIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPI 551
I L+ + + GY D++ VLHDV+EE+K + L HSE+LA+ +G++ P G I
Sbjct: 601 RINEALKVLLEQMEREGYVLDTTEVLHDVEEEQKRYLLCSHSERLAITFGIISTPAGTTI 660
Query: 552 RVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
RV KNLRVC DCH+A K ISK++GREI++RD +RFHHFKDG CSC D+W
Sbjct: 661 RVTKNLRVCVDCHTATKFISKIVGREIVVRDNSRFHHFKDGKCSCGDFW 709
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 102/217 (47%), Gaps = 18/217 (8%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM----PEKNVVSWTVMLGGFIRDSRIDDA 56
+P+ + +SW +++ G V+ GM E F QM + N VS++ ++ + +
Sbjct: 297 LPQHDGISWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLG 356
Query: 57 RRLFDMMP----EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
++L + + +V + +V Y + G + R IFD+M +++SWT MI GY +
Sbjct: 357 KQLHGYIIRSRFDGNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALH 416
Query: 113 NRIDVARKLFEVMP----EKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASN--- 165
A LF+ M + N V++ A+L + G + +AW+ F +M +
Sbjct: 417 GHAYDAISLFKRMEVEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEH 476
Query: 166 --SMILGLGQNGEVQKA-RVVFDQMREKDDATWSGMI 199
++ LG+ G +++A + D E + WS ++
Sbjct: 477 YAAVADLLGRVGRLEEAYEFISDMHIEPTGSVWSTLL 513
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 59/120 (49%), Gaps = 2/120 (1%)
Query: 232 SVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASK 291
++L +S+ S +Q+HAQ++R ++++L ++Y L LIF++ S
Sbjct: 10 TLLQNPSSVKSKSQAKQLHAQILRTSLPSPSLLSTIL-SIYSNLNLLHDSLLIFNSLPSP 68
Query: 292 DIVM-WNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREI 350
+ W SII Y +GL SL F +M +SG PD VL +C+ ++ G +
Sbjct: 69 PTTLAWKSIIRCYTSHGLFLHSLSFFIQMLASGKYPDHNVFPSVLKSCTLMKDLRFGESV 128
>gi|15228590|ref|NP_187008.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207453|sp|Q9SS60.1|PP210_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g03580
gi|6091764|gb|AAF03474.1|AC009327_13 hypothetical protein [Arabidopsis thaliana]
gi|28393735|gb|AAO42278.1| unknown protein [Arabidopsis thaliana]
gi|29824355|gb|AAP04138.1| unknown protein [Arabidopsis thaliana]
gi|332640438|gb|AEE73959.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 882
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 222/618 (35%), Positives = 364/618 (58%), Gaps = 21/618 (3%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQ-----MPEKNVVSWTVMLGGFIRDSRIDD 55
M R+ VS+ M+ GY++ M+ E+ +F + P+ VS + G +RD +
Sbjct: 268 MDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQFKPDLLTVSSVLRACGHLRDLSL-- 325
Query: 56 ARRLFDMMPEKDVVAQTN----MVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVN 111
A+ +++ M + V ++ ++ Y + G + R++F+ M K+ +SW ++ISGY+
Sbjct: 326 AKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQ 385
Query: 112 NNRIDVARKLFEVM----PEKNEVSWTAMLMGYTQCGRIQDAWEL----FKAMPMKSVVA 163
+ + A KLF++M + + +++ ++ T+ ++ L K+ +
Sbjct: 386 SGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSV 445
Query: 164 SNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGV 223
SN++I + GEV + +F M D TW+ +I R G + + T M+K V
Sbjct: 446 SNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEV 505
Query: 224 RVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKL 283
+ + + L +CASLA+ G+++H L+R ++ ++ + + LI MY KCG L
Sbjct: 506 VPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSR 565
Query: 284 IFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGK 343
+F+ + +D+V W +I Y YG GEK+L+ F +M SG++PD V + ++ ACS++G
Sbjct: 566 VFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGL 625
Query: 344 VKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
V EG FE MK+ Y ++P EHYAC+VDLL R+ ++ A + I+AMP +PDA IW S+L
Sbjct: 626 VDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVL 685
Query: 404 GACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIK 463
ACRT ++ AE ++++++L P + G IL SN YA+ ++ V+ +RK+++ +++ K
Sbjct: 686 RACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKWDKVSLIRKSLKDKHITK 745
Query: 464 PPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDV-DE 522
PG SWIEV K VH+F+ D S P+ I + LE + L+ + GY PD V ++ +E
Sbjct: 746 NPGYSWIEVGKNVHVFSSGD-DSAPQSEAIYKSLEILYSLMAKEGYIPDPREVSQNLEEE 804
Query: 523 EEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRD 582
EEK + HSE+LA+A+GL+ G P++VMKNLRVCGDCH KLISK++GREI++RD
Sbjct: 805 EEKRRLICGHSERLAIAFGLLNTEPGTPLQVMKNLRVCGDCHEVTKLISKIVGREILVRD 864
Query: 583 ANRFHHFKDGLCSCRDYW 600
ANRFH FKDG CSC+D W
Sbjct: 865 ANRFHLFKDGTCSCKDRW 882
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 102/424 (24%), Positives = 211/424 (49%), Gaps = 25/424 (5%)
Query: 2 PERNVVSWTAMVRGYVEEGMITEAGTLFWQM------PEKNVVSWTVMLGGFIRDSRIDD 55
P +NV W +++R + + G+ EA + ++ P+K + + D+ + D
Sbjct: 67 PAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGD 126
Query: 56 A--RRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNN 113
++ DM E D+ +V Y + G + R++FDEMP ++++SW ++ISGY ++
Sbjct: 127 LVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHG 186
Query: 114 RIDVARKLFE------VMPEKNEVSWTAMLMGYTQCGRIQDAWEL----FKAMPMKSVVA 163
+ A +++ ++P+ VS ++L + ++ L K+ VV
Sbjct: 187 YYEEALEIYHELKNSWIVPDSFTVS--SVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVV 244
Query: 164 SNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGV 223
+N ++ + AR VFD+M +D +++ MI Y + E + +F L +
Sbjct: 245 NNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMF-LENLDQF 303
Query: 224 RVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKL 283
+ + ++ SVL C L L + ++ +++ F ++ V ++LI +Y KCG+++ +
Sbjct: 304 KPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARD 363
Query: 284 IFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGK 343
+F++ KD V WNSIISGY Q G +++K+F M D +T + ++S +
Sbjct: 364 VFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLAD 423
Query: 344 VKEGREIFES-MKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSL 402
+K G+ + + +KS ++ + ++D+ + G+V D++K+ +M D + W ++
Sbjct: 424 LKFGKGLHSNGIKSGICIDLSVSN--ALIDMYAKCGEVGDSLKIFSSMG-TGDTVTWNTV 480
Query: 403 LGAC 406
+ AC
Sbjct: 481 ISAC 484
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 134/256 (52%), Gaps = 5/256 (1%)
Query: 195 WSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLV 254
W+ +I+ + + G E ++ + +++ V + + SV+ CA L + G V+ Q++
Sbjct: 74 WNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQIL 133
Query: 255 RCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLK 314
F+ D++V + L+ MY + G L + + +FD +D+V WNS+ISGY+ +G E++L+
Sbjct: 134 DMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALE 193
Query: 315 VFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLL 374
++HE+ +S ++PD T+ VL A VK+G+ + K V +V +
Sbjct: 194 IYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGL-HGFALKSGVNSVVVVNNGLVAMY 252
Query: 375 GRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYI 434
+ + DA ++ + M D++ + +++ ++KL++ E + + L+ + +
Sbjct: 253 LKFRRPTDARRVFDEMDVR-DSVSYNTMICG---YLKLEMVEESVRMFLENLDQFKPDLL 308
Query: 435 LLSNIYASQGRFHDVA 450
+S++ + G D++
Sbjct: 309 TVSSVLRACGHLRDLS 324
>gi|302797174|ref|XP_002980348.1| hypothetical protein SELMODRAFT_112174 [Selaginella moellendorffii]
gi|300151964|gb|EFJ18608.1| hypothetical protein SELMODRAFT_112174 [Selaginella moellendorffii]
Length = 801
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 218/626 (34%), Positives = 349/626 (55%), Gaps = 31/626 (4%)
Query: 2 PERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFD 61
P ++V+ +AM+ + G E+ LF+ M + V L + +
Sbjct: 180 PSTSLVTCSAMISACWQNGWPQESLRLFYAMNLEGTKPSGVTLVSVLNACSMLPVGSATA 239
Query: 62 MMPE---------KDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+ E +D V T ++ Y + + R FD + +V+SW M + Y+ +
Sbjct: 240 FVLEQAMEVVSATRDNVLGTTLLTTYARSNDLSRARATFDAIQSPDVVSWNAMAAAYLQH 299
Query: 113 NRIDVARKLFEVMP-EKNEVSWTAMLMGYTQCG------------RIQDAWELFKAMPMK 159
+R A LFE M E S + T C RIQ E +A
Sbjct: 300 HRPREALVLFERMLLEGVRPSVATFITALTACAAYPPQTASAIGKRIQSLLE--EAGLEG 357
Query: 160 SVVASNSMILGLGQNGEVQKARVVFDQMR--EKDDATWSGMIKVYERKGYELEVIDLFTL 217
+N+ + + G + AR VF+++ +D TW+ M+ Y G E +LF
Sbjct: 358 DTAVANATLNMYAKCGSLADARAVFERISPTRRDCITWNSMLAAYGHHGLGKEAFELFQA 417
Query: 218 MQKEG-VRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCG 276
M+ E V+ N + ++VL S S+ GR++HA++V F+ D + + L+ MY KCG
Sbjct: 418 MEAEKLVKPNKVTFVAVLDASTSRTSIAQGREIHARVVSNGFESDTVIQNALLNMYAKCG 477
Query: 277 ELVKGKLIFDNFAS--KDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGV 334
L + IFD +S +D++ W S+++GYAQYG E++LK+F M GV P+ +T +
Sbjct: 478 SLDDAQAIFDKSSSNQEDVIAWTSLVAGYAQYGQAERALKLFWTMQQQGVRPNHITFISA 537
Query: 335 LSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEP 394
L+AC++ GK+++G E+ M + + P ++H++C+VDLLGR G++++A KL+E +
Sbjct: 538 LTACNHGGKLEQGCELLSGMTPDHGIVPASKHFSCIVDLLGRCGRLDEAEKLLERTS-QA 596
Query: 395 DAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRK 454
D I W +LL AC+ +L+ E A++++QL+P+ A YI+L+++YA+ GR+++ A +RK
Sbjct: 597 DVITWMALLDACKNSKELERGERCAERIMQLDPEVASSYIVLASMYAAAGRWNEAATIRK 656
Query: 455 NMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSS 514
M + + PGCS +EV +++H F+ D SHP+ I LE++ ++ AGY D+
Sbjct: 657 TMLDKGIRADPGCSAVEVNQELHSFSAGD-KSHPKSEEIYLELERLHWSIKAAGYVADTG 715
Query: 515 FVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVM 574
VLHDV +E K L HSEKLA+A+GL+ P G P+RV+KNLRVC DCH+A KLISKV
Sbjct: 716 LVLHDVSQEHKERLLMRHSEKLAIAFGLMSTPSGSPLRVIKNLRVCSDCHTATKLISKVT 775
Query: 575 GREIILRDANRFHHFKDGLCSCRDYW 600
GR+I++RD++R+HHF G CSC DYW
Sbjct: 776 GRDILMRDSSRYHHFTSGTCSCGDYW 801
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 124/497 (24%), Positives = 228/497 (45%), Gaps = 39/497 (7%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQM-----PEKNVVSWTVMLGGFIRDS--RIDD 55
+R+VV+W AM+ ++ G EA LF M P N V++ +L + ++D
Sbjct: 73 KRDVVTWNAMISAFLRNGSAREALQLFRDMDHDGAPPPNSVTFVSVLDSCVEAGLLSLED 132
Query: 56 AR----RLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIF----DEMPKKNVISWTTMIS 107
R R+ E++ +T +V Y + G +D+ E+F DE P ++++ + MIS
Sbjct: 133 VRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKSDEEPSTSLVTCSAMIS 192
Query: 108 GYVNNNRIDVARKLFEVMP-EKNEVSWTAMLMGYTQCGRI----QDAWELFKAMPMKSVV 162
N + +LF M E + S ++ C + A+ L +AM + S
Sbjct: 193 ACWQNGWPQESLRLFYAMNLEGTKPSGVTLVSVLNACSMLPVGSATAFVLEQAMEVVSAT 252
Query: 163 ASN----SMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLM 218
N +++ ++ ++ +AR FD ++ D +W+ M Y + E + LF M
Sbjct: 253 RDNVLGTTLLTTYARSNDLSRARATFDAIQSPDVVSWNAMAAAYLQHHRPREALVLFERM 312
Query: 219 QKEGVRVNFPSLISVLSVCASL---ASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKC 275
EGVR + + I+ L+ CA+ + G+++ + L + D VA+ + MY KC
Sbjct: 313 LLEGVRPSVATFITALTACAAYPPQTASAIGKRIQSLLEEAGLEGDTAVANATLNMYAKC 372
Query: 276 GELVKGKLIFDNFAS--KDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSG-VMPDDVTLV 332
G L + +F+ + +D + WNS+++ Y +GLG+++ ++F M + V P+ VT V
Sbjct: 373 GSLADARAVFERISPTRRDCITWNSMLAAYGHHGLGKEAFELFQAMEAEKLVKPNKVTFV 432
Query: 333 GVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIE-AMP 391
VL A + + +GREI + S E T ++++ + G ++DA + + +
Sbjct: 433 AVLDASTSRTSIAQGREIHARVVSNGF-ESDTVIQNALLNMYAKCGSLDDAQAIFDKSSS 491
Query: 392 FEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGP--YILLSNIYASQ--GRFH 447
+ D I W SL+ + + AE A K ++ + P +S + A G+
Sbjct: 492 NQEDVIAWTSLVAG---YAQYGQAERALKLFWTMQQQGVRPNHITFISALTACNHGGKLE 548
Query: 448 DVAELRKNMRKRNVIKP 464
EL M + I P
Sbjct: 549 QGCELLSGMTPDHGIVP 565
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 94/399 (23%), Positives = 171/399 (42%), Gaps = 55/399 (13%)
Query: 34 EKNVVSWTVMLGGFIRDSRIDDARRLFDMMP---EKDVVAQTNMVLGYCQDGRVDEGREI 90
E+N V ++ + + + DA++ FD +P ++DVV M+ + ++G E ++
Sbjct: 39 EENSVLGNALISMYSKCGSLIDAKQAFDRLPRASKRDVVTWNAMISAFLRNGSAREALQL 98
Query: 91 FDEM-----PKKNVISWTTMISGYVNNNRID------VARKLFEVMPEKNEVSWTAMLMG 139
F +M P N +++ +++ V + + ++ E+ TA++
Sbjct: 99 FRDMDHDGAPPPNSVTFVSVLDSCVEAGLLSLEDVRAIHGRIVGAGIEREAFVRTALVDS 158
Query: 140 YTQCGRIQDAWELF----KAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATW 195
Y + G + DAWE+F P S+V ++MI QNG Q
Sbjct: 159 YGKLGSLDDAWEVFLRKSDEEPSTSLVTCSAMISACWQNGWPQ----------------- 201
Query: 196 SGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVR 255
E + LF M EG + + +L+SVL+ C+ L V Q +
Sbjct: 202 --------------ESLRLFYAMNLEGTKPSGVTLVSVLNACSMLPVGSATAFVLEQAME 247
Query: 256 -CQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLK 314
D + + L+T Y + +L + + FD S D+V WN++ + Y Q+ ++L
Sbjct: 248 VVSATRDNVLGTTLLTTYARSNDLSRARATFDAIQSPDVVSWNAMAAAYLQHHRPREALV 307
Query: 315 VFHEMFSSGVMPDDVTLVGVLSAC-SYTGKVKE--GREIFESMKSKYLVEPKTEHYACMV 371
+F M GV P T + L+AC +Y + G+ I +S+ + +E T +
Sbjct: 308 LFERMLLEGVRPSVATFITALTACAAYPPQTASAIGKRI-QSLLEEAGLEGDTAVANATL 366
Query: 372 DLLGRAGQVEDAMKLIEAM-PFEPDAIIWGSLLGACRTH 409
++ + G + DA + E + P D I W S+L A H
Sbjct: 367 NMYAKCGSLADARAVFERISPTRRDCITWNSMLAAYGHH 405
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 135/311 (43%), Gaps = 50/311 (16%)
Query: 127 EKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQ 186
E+N V A++ Y++CG + DA + F +P S
Sbjct: 39 EENSVLGNALISMYSKCGSLIDAKQAFDRLPRAS-------------------------- 72
Query: 187 MREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRV-NFPSLISVLSVC--ASLASL 243
++D TW+ MI + R G E + LF M +G N + +SVL C A L SL
Sbjct: 73 --KRDVVTWNAMISAFLRNGSAREALQLFRDMDHDGAPPPNSVTFVSVLDSCVEAGLLSL 130
Query: 244 DHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIF----DNFASKDIVMWNSI 299
+ R +H ++V + + +V + L+ Y K G L +F D S +V +++
Sbjct: 131 EDVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKSDEEPSTSLVTCSAM 190
Query: 300 ISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSY--TGK-----VKEGREIFE 352
IS Q G ++SL++F+ M G P VTLV VL+ACS G +++ E+
Sbjct: 191 ISACWQNGWPQESLRLFYAMNLEGTKPSGVTLVSVLNACSMLPVGSATAFVLEQAMEVVS 250
Query: 353 SMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKL 412
+ + L YA D L RA DA++ PD + W ++ A H +
Sbjct: 251 ATRDNVLGTTLLTTYARSND-LSRARATFDAIQ-------SPDVVSWNAMAAAYLQHHRP 302
Query: 413 DLAEVAAKKLL 423
A V +++L
Sbjct: 303 REALVLFERML 313
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 92/172 (53%), Gaps = 17/172 (9%)
Query: 223 VRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGK 282
VR N +LI++++ C+ L +L GR++H+Q+ F+ + + + LI+MY KCG L+ K
Sbjct: 3 VRPNCHALIALVNACSCLGNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAK 62
Query: 283 LIFDNF---ASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGV-MPDDVTLVGVLSAC 338
FD + +D+V WN++IS + + G ++L++F +M G P+ VT V VL +C
Sbjct: 63 QAFDRLPRASKRDVVTWNAMISAFLRNGSAREALQLFRDMDHDGAPPPNSVTFVSVLDSC 122
Query: 339 SYTG-------KVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDA 383
G + GR + ++ + V +VD G+ G ++DA
Sbjct: 123 VEAGLLSLEDVRAIHGRIVGAGIEREAFVR------TALVDSYGKLGSLDDA 168
>gi|326522230|dbj|BAK04243.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 628
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 207/462 (44%), Positives = 282/462 (61%), Gaps = 3/462 (0%)
Query: 140 YTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMI 199
Y G + F + VV +M+ L G+V AR +FD M ++D W+ M+
Sbjct: 169 YAAVGDVGAVRAAFAEIVSPDVVCVTAMLGALSAGGDVDTARELFDGMPQRDHVAWNAML 228
Query: 200 KVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFD 259
Y R G E + LF MQK GV V+ +L+SVL+ CA + +L+ G VH+ +
Sbjct: 229 TGYVRVGRSREALGLFDEMQKAGVAVSEVTLVSVLTACAQMGALERGMWVHSYVCSRGMR 288
Query: 260 VDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEM 319
V V + + L+ MY KCG + +F+ ++I W S +SG A G+GE+ L++F M
Sbjct: 289 VSVTLGTALVDMYSKCGVVTMSMEVFETMRERNIYTWTSALSGLAMNGMGEECLELFKRM 348
Query: 320 FSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQ 379
S+G+ P+ VT V VL CS G V+EGR F+SMK K+ VEP EHY CMVDL GRAG+
Sbjct: 349 ESAGMEPNGVTFVAVLRGCSVAGLVEEGRACFDSMKDKHKVEPWLEHYGCMVDLYGRAGR 408
Query: 380 VEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNI 439
++DA+ I +MP EP +WG+LL A R H +DL + A KL ++E KN ++LLSNI
Sbjct: 409 LDDAVDFINSMPVEPHEGVWGALLNASRIHNNVDLGKHAMHKLTEIESKNDAAHVLLSNI 468
Query: 440 YASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVH-MFTGRDCVSHPEHPMIMRMLE 498
YA + V+++R M+ + V K PGCS IEV+ KVH F G SHP + I ML
Sbjct: 469 YAESHNWKGVSKVRNMMKSKGVKKMPGCSAIEVDGKVHEFFVGSK--SHPRYKDIQTMLA 526
Query: 499 KIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLR 558
++ LR GY ++ VL D++EEEK ++ HSEKLA+A+GL+ LPE IR++KNLR
Sbjct: 527 EMSHRLRLQGYAANTKEVLFDIEEEEKEGAISLHSEKLALAFGLITLPEDTVIRIVKNLR 586
Query: 559 VCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
VC DCH KLISKV REI++RD NRFHHFK G CSCRDYW
Sbjct: 587 VCKDCHDYTKLISKVFDREIVMRDRNRFHHFKHGACSCRDYW 628
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 106/260 (40%), Gaps = 48/260 (18%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVV 69
+ V Y G + F ++ +VV T MLG +D AR LFD MP++D V
Sbjct: 163 SGAVSMYAAVGDVGAVRAAFAEIVSPDVVCVTAMLGALSAGGDVDTARELFDGMPQRDHV 222
Query: 70 AQTNMVLGYCQDGRVDEGREIFDEMPKKNV-ISWTTMIS------------------GYV 110
A M+ GY + GR E +FDEM K V +S T++S YV
Sbjct: 223 AWNAMLTGYVRVGRSREALGLFDEMQKAGVAVSEVTLVSVLTACAQMGALERGMWVHSYV 282
Query: 111 NNNRIDVARKL--------------------FEVMPEKNEVSWTAMLMGYTQCGRIQDAW 150
+ + V+ L FE M E+N +WT+ L G G ++
Sbjct: 283 CSRGMRVSVTLGTALVDMYSKCGVVTMSMEVFETMRERNIYTWTSALSGLAMNGMGEECL 342
Query: 151 ELFKAMPMKSV----VASNSMILGLGQNGEVQKARVVFDQMREKDDAT-----WSGMIKV 201
ELFK M + V +++ G G V++ R FD M++K + M+ +
Sbjct: 343 ELFKRMESAGMEPNGVTFVAVLRGCSVAGLVEEGRACFDSMKDKHKVEPWLEHYGCMVDL 402
Query: 202 YERKGYELEVIDLFTLMQKE 221
Y R G + +D M E
Sbjct: 403 YGRAGRLDDAVDFINSMPVE 422
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 93/220 (42%), Gaps = 39/220 (17%)
Query: 67 DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMP 126
D Q+ V Y G V R F E+ +V+ T M+ +D AR+LF+ MP
Sbjct: 158 DPHVQSGAVSMYAAVGDVGAVRAAFAEIVSPDVVCVTAMLGALSAGGDVDTARELFDGMP 217
Query: 127 EKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASN----SMILGLGQNGEVQKA-- 180
+++ V+W AML GY + GR ++A LF M V S S++ Q G +++
Sbjct: 218 QRDHVAWNAMLTGYVRVGRSREALGLFDEMQKAGVAVSEVTLVSVLTACAQMGALERGMW 277
Query: 181 ----------RV-----------------------VFDQMREKDDATWSGMIKVYERKGY 207
RV VF+ MRE++ TW+ + G
Sbjct: 278 VHSYVCSRGMRVSVTLGTALVDMYSKCGVVTMSMEVFETMRERNIYTWTSALSGLAMNGM 337
Query: 208 ELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGR 247
E ++LF M+ G+ N + ++VL C+ ++ GR
Sbjct: 338 GEECLELFKRMESAGMEPNGVTFVAVLRGCSVAGLVEEGR 377
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 97/218 (44%), Gaps = 18/218 (8%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV----VSWTVMLGGFIRDSRIDDA 56
MP+R+ V+W AM+ GYV G EA LF +M + V V+ +L + ++
Sbjct: 216 MPQRDHVAWNAMLTGYVRVGRSREALGLFDEMQKAGVAVSEVTLVSVLTACAQMGALERG 275
Query: 57 RRLFDMMPEK----DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+ + + V T +V Y + G V E+F+ M ++N+ +WT+ +SG N
Sbjct: 276 MWVHSYVCSRGMRVSVTLGTALVDMYSKCGVVTMSMEVFETMRERNIYTWTSALSGLAMN 335
Query: 113 NRIDVARKLFEVMP----EKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVAS---- 164
+ +LF+ M E N V++ A+L G + G +++ F +M K V
Sbjct: 336 GMGEECLELFKRMESAGMEPNGVTFVAVLRGCSVAGLVEEGRACFDSMKDKHKVEPWLEH 395
Query: 165 -NSMILGLGQNGEVQKARVVFDQMR-EKDDATWSGMIK 200
M+ G+ G + A + M E + W ++
Sbjct: 396 YGCMVDLYGRAGRLDDAVDFINSMPVEPHEGVWGALLN 433
>gi|225433487|ref|XP_002264838.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06140,
mitochondrial [Vitis vinifera]
gi|298205230|emb|CBI17289.3| unnamed protein product [Vitis vinifera]
Length = 688
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 229/646 (35%), Positives = 353/646 (54%), Gaps = 49/646 (7%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFD- 61
R+++ + Y++ G + A F + +N+ SW +L ++ D +LF
Sbjct: 44 HRSLLFGPMIFGAYIQLGSLHVASKAFNHITFENLHSWNTILASHSKNKCFYDVLQLFKR 103
Query: 62 MMPEKDVVAQTNMVLG--------------------------------------YCQDGR 83
M+ E +V N+V Y + G
Sbjct: 104 MLKEGKLVDSFNLVFAVKACFGLSLFQGAKLFHSLAIKLRLEGDPYVAPALMNVYTELGS 163
Query: 84 VDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQ- 142
++E ++F+E+P KN + W MI G++N + +LF M ++ G Q
Sbjct: 164 LEEAHKVFEEVPLKNSVIWGVMIKGHLNFSEEFGVFELFSRMRRSGFELDPFVVEGLIQA 223
Query: 143 CGRIQDAWE--LFKAMPMK-SVVASN-----SMILGLGQNGEVQKARVVFDQMREKDDAT 194
CG + E F + +K + + SN S++ + G + A +F+++ +D
Sbjct: 224 CGNVYAGKEGKTFHGLCIKKNFIDSNFFLQTSLVDMYMKCGFLDFALKLFEEISYRDVVV 283
Query: 195 WSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLV 254
WS +I + R G LE I +F M + V N + S++ C+SL SL GR VH ++
Sbjct: 284 WSAIIAGFARNGRALESISMFRQMLADSVTPNSVTFASIVLACSSLGSLKQGRSVHGYMI 343
Query: 255 RCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLK 314
R ++DV + I MY KCG +V +F K++ W+++I+G+ +GL ++L
Sbjct: 344 RNGVELDVKNYTSFIDMYAKCGCIVTAYRVFCQIPEKNVFSWSTMINGFGMHGLCAEALN 403
Query: 315 VFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLL 374
+F+EM S +P+ VT V VLSACS++G+++EG F+SM Y + P EHYACMVDLL
Sbjct: 404 LFYEMRSVNQLPNSVTFVSVLSACSHSGRIEEGWSHFKSMSRDYGITPVEEHYACMVDLL 463
Query: 375 GRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYI 434
GRAG++++A+ I MP EP A WG+LLGACR H + +LAE AKKLL LE +G Y+
Sbjct: 464 GRAGKIDEALSFINNMPTEPGASAWGALLGACRIHRRAELAEEVAKKLLPLESDQSGVYV 523
Query: 435 LLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIM 494
+LSNIYA G + V + R M ++ + K G + IE+E+K+++F+ D ++ ++ I
Sbjct: 524 MLSNIYADVGMWEMVKKTRLKMCEKGIHKIVGFTSIEIEEKLYLFSSEDRFAY-KNTQIE 582
Query: 495 RMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVM 554
+ + +RE GY PD FVLHDVD+E K L HSEKLA+ +GL+ EG+PIR+
Sbjct: 583 SLWNSLKERMRELGYVPDLRFVLHDVDDEVKQEVLCGHSEKLAIVFGLLNSGEGMPIRIT 642
Query: 555 KNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
KN+RVCGDCH+A K IS + R+II+RD RFHH +DG+CSC DYW
Sbjct: 643 KNMRVCGDCHTASKFISLITRRKIIMRDVKRFHHVQDGVCSCGDYW 688
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 87/175 (49%), Gaps = 5/175 (2%)
Query: 229 SLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNF 288
+L+S+ +LAS Q++AQ++ + ++ YI+ G L F++
Sbjct: 17 TLLSLFRFTKTLAS---NHQLNAQILVNALHRSLLFGPMIFGAYIQLGSLHVASKAFNHI 73
Query: 289 ASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGR 348
+++ WN+I++ +++ L++F M G + D LV + AC + + +G
Sbjct: 74 TFENLHSWNTILASHSKNKCFYDVLQLFKRMLKEGKLVDSFNLVFAVKAC-FGLSLFQGA 132
Query: 349 EIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
++F S+ K +E ++++ G +E+A K+ E +P + +++IWG ++
Sbjct: 133 KLFHSLAIKLRLEGDPYVAPALMNVYTELGSLEEAHKVFEEVPLK-NSVIWGVMI 186
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 82/174 (47%), Gaps = 21/174 (12%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPE----KNVVSWTVMLGGFIRDSRIDDA 56
+PE+NV SW+ M+ G+ G+ EA LF++M N V++ +L RI++
Sbjct: 377 IPEKNVFSWSTMINGFGMHGLCAEALNLFYEMRSVNQLPNSVTFVSVLSACSHSGRIEEG 436
Query: 57 -------RRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKK-NVISWTTMISG 108
R + + P ++ A +LG + G++DE + MP + +W ++
Sbjct: 437 WSHFKSMSRDYGITPVEEHYACMVDLLG--RAGKIDEALSFINNMPTEPGASAWGALLGA 494
Query: 109 YVNNNRIDVARKLF-EVMPEKNEVSWTAMLMG--YTQCGRIQDAWELFKAMPMK 159
+ R ++A ++ +++P +++ S +++ Y G WE+ K +K
Sbjct: 495 CRIHRRAELAEEVAKKLLPLESDQSGVYVMLSNIYADVG----MWEMVKKTRLK 544
>gi|357128220|ref|XP_003565772.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Brachypodium distachyon]
Length = 1206
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 241/721 (33%), Positives = 367/721 (50%), Gaps = 126/721 (17%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLF----WQMPEKNVVSWTVML------------ 44
+PERN+VS+ +V+G+ G EA LF W+ E N T +L
Sbjct: 491 LPERNMVSFVTLVQGHALRGEFEEASALFQRLRWEGHEVNQFVLTTVLKLVVAMDTLGLA 550
Query: 45 --------------GGFIRDSRID---------DARRLFDMMPEKDVVAQTNMVLGYCQD 81
F+ + ID DARR+FD + KD VA T MV Y ++
Sbjct: 551 WGVHACACKLGHDRNAFVGSALIDAYSMCGVVSDARRVFDGIVGKDAVAWTAMVSCYSEN 610
Query: 82 GRVDEGREIFDEM----PKKNVISWTTMISG----------------------------- 108
+ +IF +M K N + T+++
Sbjct: 611 DCPENTLQIFSKMRVAVSKLNPFALTSVLRAAVCLSSVVLGKGIHACSVKTLYDTERHVY 670
Query: 109 ------YVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVV 162
Y I+ AR FE++ + + W+ M+ Y QC + + A+ELF M M+S V
Sbjct: 671 GALLDMYAKCGNIEDARLAFEMVTNDDVILWSLMISRYAQCNQNEQAFELFIRM-MRSSV 729
Query: 163 ASNSM-------------ILGLGQN---------------------------GEVQKARV 182
+ N +L LG+ +++ +
Sbjct: 730 SPNEFSLSSVLQACANMPLLDLGKQIHNHAIKIGHESELFVGNALIDLYAKCSDMESSLE 789
Query: 183 VFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLAS 242
+F +R+ ++ +W+ +I Y + G+ + +F M+ V + SVL CAS AS
Sbjct: 790 IFSSLRDVNEVSWNTIIVGYSKSGFGEAALSVFREMRAASVPSTQVTYSSVLRACASTAS 849
Query: 243 LDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISG 302
++H QVH + + F+ D V++ LI Y KCG + + IF+ D+V WN+IISG
Sbjct: 850 INHVGQVHCLIEKSTFNSDTIVSNSLIDSYAKCGCIRDAREIFETLKECDLVSWNAIISG 909
Query: 303 YAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEP 362
YA +G + ++F M + + +D+T V +LS C TG V +G +F+SM+ + +EP
Sbjct: 910 YAVHGQAAMAQELFDMMSKNSIKANDITFVALLSVCGSTGLVSQGLSLFDSMRLDHGIEP 969
Query: 363 KTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKL 422
EHY C+V LLGRAG++ DA+ I +P P A++W +LL +C H ++L +A+K+
Sbjct: 970 SMEHYTCIVRLLGRAGRLNDALNFIGDIPSAPSAMVWRALLSSCIVHKNVELGRFSAEKV 1029
Query: 423 LQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGR 482
L++EP++ Y+LLSN+Y++ G VA RK+MR V K PG SW+E++ +VH F+
Sbjct: 1030 LEIEPQDETTYVLLSNMYSAAGSLDQVAFFRKSMRNIGVRKEPGLSWVEIKGEVHAFS-- 1087
Query: 483 DCVSHPEHP---MIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVA 539
V +HP +I MLE + GY PD+ VLHD++EE+KV L HSE+LA+A
Sbjct: 1088 --VGSEDHPCMRVINAMLEWLNLKAIREGYVPDTDEVLHDLEEEQKVRMLWVHSERLALA 1145
Query: 540 YGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDY 599
YGLV P G PIR+MKNLR C DCH+ K+ISK++ +EII+RD NRFHHF++G CSC DY
Sbjct: 1146 YGLVMTPPGHPIRIMKNLRSCLDCHAIFKVISKIVKQEIIVRDINRFHHFEEGTCSCGDY 1205
Query: 600 W 600
W
Sbjct: 1206 W 1206
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 154/321 (47%), Gaps = 9/321 (2%)
Query: 78 YCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVM----PEKNEVSW 133
Y + G +FD +P++N++S+ T++ G+ + A LF+ + E N+
Sbjct: 475 YTKVGPFGSAHRVFDGLPERNMVSFVTLVQGHALRGEFEEASALFQRLRWEGHEVNQFVL 534
Query: 134 TAMLMGYTQCGRIQDAWELF----KAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMRE 189
T +L + AW + K ++ +++I G V AR VFD +
Sbjct: 535 TTVLKLVVAMDTLGLAWGVHACACKLGHDRNAFVGSALIDAYSMCGVVSDARRVFDGIVG 594
Query: 190 KDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQV 249
KD W+ M+ Y + +F+ M+ ++N +L SVL L+S+ G+ +
Sbjct: 595 KDAVAWTAMVSCYSENDCPENTLQIFSKMRVAVSKLNPFALTSVLRAAVCLSSVVLGKGI 654
Query: 250 HAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLG 309
HA V+ +D + +V L+ MY KCG + +L F+ + D+++W+ +IS YAQ
Sbjct: 655 HACSVKTLYDTERHVYGALLDMYAKCGNIEDARLAFEMVTNDDVILWSLMISRYAQCNQN 714
Query: 310 EKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYAC 369
E++ ++F M S V P++ +L VL AC+ + G++I + K E +
Sbjct: 715 EQAFELFIRMMRSSVSPNEFSLSSVLQACANMPLLDLGKQI-HNHAIKIGHESELFVGNA 773
Query: 370 MVDLLGRAGQVEDAMKLIEAM 390
++DL + +E ++++ ++
Sbjct: 774 LIDLYAKCSDMESSLEIFSSL 794
Score = 46.6 bits (109), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 50/105 (47%), Gaps = 2/105 (1%)
Query: 233 VLSVCASLASLDHGRQVHAQLVRCQ--FDVDVYVASVLITMYIKCGELVKGKLIFDNFAS 290
+L C + GR VH +VR +D++ A+VL+ MY K G +FD
Sbjct: 434 LLQGCVARGDARGGRAVHGHVVRSGGLARLDLFCANVLLNMYTKVGPFGSAHRVFDGLPE 493
Query: 291 KDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVL 335
+++V + +++ G+A G E++ +F + G + L VL
Sbjct: 494 RNMVSFVTLVQGHALRGEFEEASALFQRLRWEGHEVNQFVLTTVL 538
>gi|449437930|ref|XP_004136743.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Cucumis sativus]
Length = 666
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 215/558 (38%), Positives = 327/558 (58%), Gaps = 42/558 (7%)
Query: 53 IDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKK----NVISWTTMISG 108
+ DAR +FD MP+K+VV+ T M+ Y Q G E +F EM + N ++ T+++
Sbjct: 141 LGDAREMFDEMPQKNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILTS 200
Query: 109 YVNNNRIDVARKLFEVMPEKNEVSW----TAMLMGYTQCGRIQDAWELFKAMPMKSVVAS 164
+ + R++ + ++N S +++L Y + GRI DA +F +P + VVA
Sbjct: 201 CYGSLGFETGRQIHSIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPERDVVAC 260
Query: 165 NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVR 224
++I G Y + G + E + LF +Q EG+
Sbjct: 261 TAIISG-------------------------------YAQMGLDEEALKLFRQLQIEGMN 289
Query: 225 VNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLI 284
N + SVL+ + LA+L+HG+QVH+ ++R V + + LI MY KCG + + I
Sbjct: 290 SNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVLLNSLIDMYSKCGNVCYARRI 349
Query: 285 FDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSG-VMPDDVTLVGVLSACSYTGK 343
FD+ + + WN+++ GY+++G+ + L++F M V PD +T + VLS CS+
Sbjct: 350 FDSMPERTCISWNAMLVGYSKHGMAREVLELFKLMREENKVKPDSITYLAVLSGCSHGQL 409
Query: 344 VKEGREIFESM-KSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSL 402
G EIF +M K +EP HY C+VDLLGRAG+VE+A I+ MPF P A IWGSL
Sbjct: 410 EDMGLEIFYNMVNGKDGIEPDIGHYGCVVDLLGRAGRVEEAFDFIKKMPFVPTAAIWGSL 469
Query: 403 LGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVI 462
LG+CR H +++ + +KLL+LEP+NAG Y++LSN+YAS G++ D+ +R M+++ V
Sbjct: 470 LGSCRVHSDVEIGIIVGQKLLELEPENAGNYVILSNLYASAGKWEDMRNIRDLMQEKAVT 529
Query: 463 KPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDE 522
K PG SW+E+++ VH F D +HP + + ++++ +E GY PD S VL+DVDE
Sbjct: 530 KEPGRSWVELDQIVHTFHASD-HTHPRREEVAKKVKELSIKFKEDGYVPDLSCVLYDVDE 588
Query: 523 EEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRD 582
E+K L HSEKLA+A+GL+ PEG IRV+KNLR+C DCHS K +S++ R +ILRD
Sbjct: 589 EQKEKVLLGHSEKLALAFGLIATPEGTTIRVIKNLRICVDCHSFAKFVSRLYARTVILRD 648
Query: 583 ANRFHHFKDGLCSCRDYW 600
NRFH+ G+CSC DYW
Sbjct: 649 KNRFHNIVGGVCSCGDYW 666
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 110/223 (49%), Gaps = 3/223 (1%)
Query: 222 GVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKG 281
G V F ++L+ C S ++ G++VH +++ + VY+ + LI +Y KC L
Sbjct: 85 GREVKFEGYDTILNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDA 144
Query: 282 KLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYT 341
+ +FD K++V W ++IS Y+Q G ++L +F EM S P+ T +L++C +
Sbjct: 145 REMFDEMPQKNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGS 204
Query: 342 GKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGS 401
+ GR+I S+ K E + ++D+ ++G++ DA + +P E D + +
Sbjct: 205 LGFETGRQI-HSIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLP-ERDVVACTA 262
Query: 402 LLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQG 444
++ M LD + + LQ+E N+ S + A G
Sbjct: 263 IISG-YAQMGLDEEALKLFRQLQIEGMNSNSVTYASVLTALSG 304
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 133/294 (45%), Gaps = 50/294 (17%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDV- 68
T ++ Y + + +A +F +MP+KNVVSWT M+ + + +A LF M D
Sbjct: 129 TRLIVLYNKCDCLGDAREMFDEMPQKNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTE 188
Query: 69 ----VAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISW----TTMISGYVNNNRIDVARK 120
T + Y G + GR+I K+N S ++++ Y + RI A
Sbjct: 189 PNHFTFATILTSCYGSLG-FETGRQIHSIAIKRNYESHMFVGSSLLDMYAKSGRICDAHG 247
Query: 121 LFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKS-------------------- 160
+F +PE++ V+ TA++ GY Q G ++A +LF+ + ++
Sbjct: 248 VFHCLPERDVVACTAIISGYAQMGLDEEALKLFRQLQIEGMNSNSVTYASVLTALSGLAA 307
Query: 161 -------------------VVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKV 201
VV NS+I + G V AR +FD M E+ +W+ M+
Sbjct: 308 LNHGKQVHSHVLRSGQYSYVVLLNSLIDMYSKCGNVCYARRIFDSMPERTCISWNAMLVG 367
Query: 202 YERKGYELEVIDLFTLMQKEG-VRVNFPSLISVLSVCASLASLDHGRQVHAQLV 254
Y + G EV++LF LM++E V+ + + ++VLS C+ D G ++ +V
Sbjct: 368 YSKHGMAREVLELFKLMREENKVKPDSITYLAVLSGCSHGQLEDMGLEIFYNMV 421
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 111/238 (46%), Gaps = 47/238 (19%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM----PEKNVVSWTVMLGG---------- 46
MP++NVVSWTAM+ Y + G EA LF +M E N ++ +L
Sbjct: 151 MPQKNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLGFETG 210
Query: 47 -------------------------FIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQD 81
+ + RI DA +F +PE+DVVA T ++ GY Q
Sbjct: 211 RQIHSIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIISGYAQM 270
Query: 82 GRVDEGREIFDEMP----KKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAML 137
G +E ++F ++ N +++ ++++ ++ +++ + + S+ +L
Sbjct: 271 GLDEEALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVLL 330
Query: 138 MG----YTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKD 191
Y++CG + A +F +MP ++ ++ N+M++G ++G ++ +F MRE++
Sbjct: 331 NSLIDMYSKCGNVCYARRIFDSMPERTCISWNAMLVGYSKHGMAREVLELFKLMREEN 388
>gi|359482011|ref|XP_002276416.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Vitis vinifera]
Length = 629
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 223/622 (35%), Positives = 349/622 (56%), Gaps = 34/622 (5%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQM------PE--------KNVVSWTVMLGGFI 48
+ SW A +R + EA L+ QM P K+ S ++ L G
Sbjct: 18 QNTTASWNARLRELARQRHFQEALNLYCQMLASGDSPNAFTFPFAFKSCASLSLPLAG-- 75
Query: 49 RDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDE--MPKKNVISWTTMI 106
S++ + E + QT+++ YC+ + R++FDE + + + +I
Sbjct: 76 --SQLHG--HVIKTGCEPEPFVQTSLISMYCKCSTIASARKVFDENHHSRNLAVCYNALI 131
Query: 107 SGYVNNNRIDVARKLFEVM-PEKNEVSWTAMLMGYTQC-GRIQDAWEL-FKAMPMK---- 159
+GY N+R A LF M E V+ ML C G I + A ++
Sbjct: 132 AGYSLNSRFSDAVLLFRQMRKEGVSVNAVTMLGLIPVCAGPIHLGFGTSLHACSVRFGLD 191
Query: 160 -SVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLM 218
+ N ++ + G V AR +FD M EK TW+ MI Y + G V+DL+ M
Sbjct: 192 GDLSVGNCLLTMYVRCGSVDFARKLFDGMPEKGLITWNAMISGYAQNGLAGHVLDLYRKM 251
Query: 219 QKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGEL 278
+ G+ + +L+ VLS CA L + GR+V ++ F + ++ + LI MY +CG L
Sbjct: 252 EFTGIVPDPVTLVGVLSSCAHLGAHAAGREVEQRIELSGFGFNPFLKNALINMYARCGNL 311
Query: 279 VKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSAC 338
VK + IFD K+++ W +II+GY +G GE ++++F EM SS +PD V VLSAC
Sbjct: 312 VKARAIFDGMTEKNVISWTAIIAGYGMHGQGELAVQLFDEMISSDELPDGAAFVSVLSAC 371
Query: 339 SYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAII 398
S+ G ++G F +M+ Y ++P EHY+C+VDLLGRAG++E+A KLI +M EPD +
Sbjct: 372 SHAGLTEKGLYYFTAMERDYGLQPGPEHYSCVVDLLGRAGRLEEARKLIGSMSVEPDGAV 431
Query: 399 WGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRK 458
WG+LLGAC+ H ++LAE+A +K+++ EP N G Y+LLSNI++ G + +R MR+
Sbjct: 432 WGALLGACKIHRNVELAELAFEKVIEFEPTNIGYYVLLSNIFSEAGNMEGILRVRVMMRE 491
Query: 459 RNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLH 518
R + K PGCS++E + ++H+F D +HP+ I ML+ + +++ G D+
Sbjct: 492 RKLKKEPGCSYVEYQGRIHLFLAGD-RTHPQAQEIYHMLDGLEDIIKRRGGSNDND---Q 547
Query: 519 DVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREI 578
+ EE + + HSEKLA+A+GL+ G I V+KNLRVCGDCH +KL+S+++ R++
Sbjct: 548 ESRNEELITGMGVHSEKLAIAFGLINTEPGTEITVIKNLRVCGDCHLFLKLVSEIVDRQL 607
Query: 579 ILRDANRFHHFKDGLCSCRDYW 600
++RDA RFHHFK+G+CSC+DYW
Sbjct: 608 VVRDATRFHHFKNGVCSCKDYW 629
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 120/257 (46%), Gaps = 31/257 (12%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIR----------- 49
MPE+ +++W AM+ GY + G+ L+ +M +V V L G +
Sbjct: 220 MPEKGLITWNAMISGYAQNGLAGHVLDLYRKMEFTGIVPDPVTLVGVLSSCAHLGAHAAG 279
Query: 50 ---DSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMI 106
+ RI+ + F+ + ++ NM Y + G + + R IFD M +KNVISWT +I
Sbjct: 280 REVEQRIELSGFGFNPFLKNALI---NM---YARCGNLVKARAIFDGMTEKNVISWTAII 333
Query: 107 SGYVNNNRIDVARKLFEVMPEKNEV----SWTAMLMGYTQCGRIQDAWELFKAMPMKSVV 162
+GY + + ++A +LF+ M +E+ ++ ++L + G + F AM +
Sbjct: 334 AGYGMHGQGELAVQLFDEMISSDELPDGAAFVSVLSACSHAGLTEKGLYYFTAMERDYGL 393
Query: 163 AS-----NSMILGLGQNGEVQKARVVFDQMR-EKDDATWSGMIKVYE-RKGYELEVIDLF 215
+ ++ LG+ G +++AR + M E D A W ++ + + EL +
Sbjct: 394 QPGPEHYSCVVDLLGRAGRLEEARKLIGSMSVEPDGAVWGALLGACKIHRNVELAELAFE 453
Query: 216 TLMQKEGVRVNFPSLIS 232
+++ E + + L+S
Sbjct: 454 KVIEFEPTNIGYYVLLS 470
>gi|15220337|ref|NP_172596.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122213654|sp|Q3E6Q1.1|PPR32_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g11290
gi|332190592|gb|AEE28713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 809
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 216/619 (34%), Positives = 349/619 (56%), Gaps = 24/619 (3%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MPER++VSW +V GY + GM A + M E+N+ + + + A RL
Sbjct: 196 MPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAV---SALRLI 252
Query: 61 DMMPEKDVVA-----------QTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGY 109
+ E A T +V Y + G ++ R++FD M ++NV+SW +MI Y
Sbjct: 253 SVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAY 312
Query: 110 VNNNRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAMPM----KSV 161
V N A +F+ M ++ +VS L G ++ + K ++V
Sbjct: 313 VQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNV 372
Query: 162 VASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKE 221
NS+I + EV A +F +++ + +W+ MI + + G ++ ++ F+ M+
Sbjct: 373 SVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSR 432
Query: 222 GVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKG 281
V+ + + +SV++ A L+ H + +H ++R D +V+V + L+ MY KCG ++
Sbjct: 433 TVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIA 492
Query: 282 KLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYT 341
+LIFD + + + WN++I GY +G G+ +L++F EM + P+ VT + V+SACS++
Sbjct: 493 RLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHS 552
Query: 342 GKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGS 401
G V+ G + F MK Y +E +HY MVDLLGRAG++ +A I MP +P ++G+
Sbjct: 553 GLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGA 612
Query: 402 LLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNV 461
+LGAC+ H ++ AE AA++L +L P + G ++LL+NIY + + V ++R +M ++ +
Sbjct: 613 MLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGL 672
Query: 462 IKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVD 521
K PGCS +E++ +VH F +HP+ I LEK+ ++EAGY PD++ VL V+
Sbjct: 673 RKTPGCSMVEIKNEVHSFFS-GSTAHPDSKKIYAFLEKLICHIKEAGYVPDTNLVL-GVE 730
Query: 522 EEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILR 581
+ K L HSEKLA+++GL+ G I V KNLRVC DCH+A K IS V GREI++R
Sbjct: 731 NDVKEQLLSTHSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHNATKYISLVTGREIVVR 790
Query: 582 DANRFHHFKDGLCSCRDYW 600
D RFHHFK+G CSC DYW
Sbjct: 791 DMQRFHHFKNGACSCGDYW 809
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 116/448 (25%), Positives = 200/448 (44%), Gaps = 51/448 (11%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF------DMM 63
T +V + G + EA +F + K V + ML GF + S +D A + F D+
Sbjct: 73 TKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVE 132
Query: 64 P---------------------------------EKDVVAQTNMVLGYCQDGRVDEGREI 90
P D+ A T + Y + +V+E R++
Sbjct: 133 PVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKV 192
Query: 91 FDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNE----VSWTAMLMGYTQCGRI 146
FD MP+++++SW T+++GY N +A ++ + M E+N ++ ++L + I
Sbjct: 193 FDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLI 252
Query: 147 QDAWELFKAMPMKS-----VVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKV 201
E+ M+S V S +++ + G ++ AR +FD M E++ +W+ MI
Sbjct: 253 SVGKEI-HGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDA 311
Query: 202 YERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVD 261
Y + E + +F M EGV+ S++ L CA L L+ GR +H V D +
Sbjct: 312 YVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRN 371
Query: 262 VYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFS 321
V V + LI+MY KC E+ +F S+ +V WN++I G+AQ G +L F +M S
Sbjct: 372 VSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRS 431
Query: 322 SGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVE 381
V PD T V V++A + + I + + ++ +VD+ + G +
Sbjct: 432 RTVKPDTFTYVSVITAIAELSITHHAKWI-HGVVMRSCLDKNVFVTTALVDMYAKCGAIM 490
Query: 382 DAMKLIEAMPFEPDAIIWGSLLGACRTH 409
A +LI M E W +++ TH
Sbjct: 491 IA-RLIFDMMSERHVTTWNAMIDGYGTH 517
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 152/294 (51%), Gaps = 20/294 (6%)
Query: 71 QTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMP---- 126
QT +V +C+ G VDE +F+ + K + + TM+ G+ + +D A + F M
Sbjct: 72 QTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDV 131
Query: 127 EKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGL----------GQNGE 176
E ++T +L CG D EL + ++ + L L + +
Sbjct: 132 EPVVYNFTYLL---KVCG---DEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQ 185
Query: 177 VQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSV 236
V +AR VFD+M E+D +W+ ++ Y + G +++ M +E ++ +F +++SVL
Sbjct: 186 VNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPA 245
Query: 237 CASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMW 296
++L + G+++H +R FD V +++ L+ MY KCG L + +FD +++V W
Sbjct: 246 VSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSW 305
Query: 297 NSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREI 350
NS+I Y Q ++++ +F +M GV P DV+++G L AC+ G ++ GR I
Sbjct: 306 NSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFI 359
Score = 46.6 bits (109), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 37/174 (21%), Positives = 85/174 (48%), Gaps = 7/174 (4%)
Query: 233 VLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKD 292
+L C+SL L RQ+ + + + + + L++++ + G + + +F+ SK
Sbjct: 43 LLERCSSLKEL---RQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKL 99
Query: 293 IVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFE 352
V++++++ G+A+ +K+L+ F M V P +L C +++ G+EI
Sbjct: 100 NVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHG 159
Query: 353 SM-KSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
+ KS + ++ + ++ + QV +A K+ + MP E D + W +++
Sbjct: 160 LLVKSGFSLDLFA--MTGLENMYAKCRQVNEARKVFDRMP-ERDLVSWNTIVAG 210
>gi|357119550|ref|XP_003561500.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Brachypodium distachyon]
Length = 892
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 202/469 (43%), Positives = 294/469 (62%), Gaps = 3/469 (0%)
Query: 134 TAMLMGYTQCGRIQDAWELFKAM-PMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDD 192
TA+L Y + G A LF M P VV+ +M+ G + AR +FD + KD
Sbjct: 425 TALLGMYARAGDATAARALFDDMLPDPHVVSVTAMLTCYADMGALDDARSLFDGLPTKDF 484
Query: 193 ATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQ 252
W+ MI Y + G E + LF M GV + +++ VLS A L +++ G+ +H+
Sbjct: 485 VCWNAMIDGYTQHGRPNEALRLFRRMLGSGVEPDEVTVVLVLSAVAQLGTVESGKWLHSY 544
Query: 253 LVRCQ-FDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEK 311
+ + + V V + LI MY KCG L +F KDIV+WN++I+GYA +G K
Sbjct: 545 VKNSRRVQLSVRVGTALIDMYCKCGSLGDAVDVFHGIGDKDIVVWNAMINGYAMHGDSRK 604
Query: 312 SLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMV 371
+L++F + G+ P D+T +G+L+ACS++G V+EGRE F+SM+ +Y ++PK EHY CMV
Sbjct: 605 ALEMFVQSREQGLWPTDITFIGLLNACSHSGMVEEGREFFQSMEREYGIDPKIEHYGCMV 664
Query: 372 DLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAG 431
DLLGRAG +++A L+++M PDA++W SLL ACR H + L + A L+ N+G
Sbjct: 665 DLLGRAGLIKEAFCLVQSMKITPDAVMWVSLLAACRLHKNMSLGQQIADYLVAKGLANSG 724
Query: 432 PYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHP 491
YILLSNIYA+ G + +VA +R M+ + K PGCS IE++++V+ F D +SHP
Sbjct: 725 MYILLSNIYAAVGNWGEVARVRSMMKASGIQKEPGCSSIEIDREVYEFVAGD-MSHPRTD 783
Query: 492 MIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPI 551
I ML+K+ GL++E G+ P + VLHD+DE K +L HSEKLA+A+GL+ G I
Sbjct: 784 EIYVMLDKMNGLVKEHGHVPQTELVLHDLDEATKEKALAVHSEKLALAFGLISTQPGATI 843
Query: 552 RVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
+++KNLR C DCH+ +KLIS++ GR+I+ RD NRFHHF DG CSC DYW
Sbjct: 844 KIVKNLRACSDCHAVLKLISRITGRKIVFRDRNRFHHFVDGSCSCGDYW 892
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/366 (21%), Positives = 153/366 (41%), Gaps = 49/366 (13%)
Query: 141 TQCGRIQDAWELFKAMPMKSVVASNSMILGL------GQNGEVQKARVVFDQMREKDDAT 194
T C + A EL A+ ++ + + +G + + + + R+
Sbjct: 297 TSCSTARRAAELHAAVLRTGLLDATDRAVAFRLQRAYAASGRLDLSLALLRRTRDPTAIF 356
Query: 195 WSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLV 254
++ I + +G+ L + L + M +G+ +L + L C L+ GR +H
Sbjct: 357 YTSAIHAHSSRGHRLPALALLSDMLAQGLLPTAHTLSASLPACRGLSP---GRALHGYAF 413
Query: 255 RCQFDVDVYVASVLITMYIKCGELVKGKLIFDN--------------------------- 287
+ D YVA+ L+ MY + G+ + +FD+
Sbjct: 414 KLALAGDSYVATALLGMYARAGDATAARALFDDMLPDPHVVSVTAMLTCYADMGALDDAR 473
Query: 288 -----FASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTG 342
+KD V WN++I GY Q+G ++L++F M SGV PD+VT+V VLSA + G
Sbjct: 474 SLFDGLPTKDFVCWNAMIDGYTQHGRPNEALRLFRRMLGSGVEPDEVTVVLVLSAVAQLG 533
Query: 343 KVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSL 402
V+ G+ + +K+ V+ ++D+ + G + DA+ + + + D ++W ++
Sbjct: 534 TVESGKWLHSYVKNSRRVQLSVRVGTALIDMYCKCGSLGDAVDVFHGIG-DKDIVVWNAM 592
Query: 403 LGACRTHMKLDLAEVAAKKLLQLEPKNAGP----YILLSNIYASQGRFHDVAELRKNMRK 458
+ H + A + +Q + P +I L N + G + E ++M +
Sbjct: 593 INGYAMHGD---SRKALEMFVQSREQGLWPTDITFIGLLNACSHSGMVEEGREFFQSMER 649
Query: 459 RNVIKP 464
I P
Sbjct: 650 EYGIDP 655
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/336 (22%), Positives = 144/336 (42%), Gaps = 56/336 (16%)
Query: 11 AMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVA 70
A++ + +G++ A TL +P +S L G+ F + D
Sbjct: 375 ALLSDMLAQGLLPTAHTLSASLPACRGLSPGRALHGYA-----------FKLALAGDSYV 423
Query: 71 QTNMVLGYCQDGRVDEGREIFDEM-PKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKN 129
T ++ Y + G R +FD+M P +V+S T M++ Y + +D AR LF+ +P K+
Sbjct: 424 ATALLGMYARAGDATAARALFDDMLPDPHVVSVTAMLTCYADMGALDDARSLFDGLPTKD 483
Query: 130 EVSWTAMLMGYTQCGRIQDAWELFKAM------PMK-SVVASNSMILGLG---------- 172
V W AM+ GYTQ GR +A LF+ M P + +VV S + LG
Sbjct: 484 FVCWNAMIDGYTQHGRPNEALRLFRRMLGSGVEPDEVTVVLVLSAVAQLGTVESGKWLHS 543
Query: 173 -----------------------QNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYEL 209
+ G + A VF + +KD W+ MI Y G
Sbjct: 544 YVKNSRRVQLSVRVGTALIDMYCKCGSLGDAVDVFHGIGDKDIVVWNAMINGYAMHGDSR 603
Query: 210 EVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVA--SV 267
+ +++F +++G+ + I +L+ C+ ++ GR+ + R ++ +D +
Sbjct: 604 KALEMFVQSREQGLWPTDITFIGLLNACSHSGMVEEGREFFQSMER-EYGIDPKIEHYGC 662
Query: 268 LITMYIKCGELVKGKLIFDNFA-SKDIVMWNSIISG 302
++ + + G + + + + + D VMW S+++
Sbjct: 663 MVDLLGRAGLIKEAFCLVQSMKITPDAVMWVSLLAA 698
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 111/230 (48%), Gaps = 36/230 (15%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
+P+ +VVS TAM+ Y + G + +A +LF +P K+ V W M+ G+ + R ++A RLF
Sbjct: 448 LPDPHVVSVTAMLTCYADMGALDDARSLFDGLPTKDFVCWNAMIDGYTQHGRPNEALRLF 507
Query: 61 DMM----PEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNN-RI 115
M E D V ++ Q G V+ G+ W + YV N+ R+
Sbjct: 508 RRMLGSGVEPDEVTVVLVLSAVAQLGTVESGK-------------W---LHSYVKNSRRV 551
Query: 116 DVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNG 175
++ ++ TA++ Y +CG + DA ++F + K +V N+MI G +G
Sbjct: 552 QLSVRV-----------GTALIDMYCKCGSLGDAVDVFHGIGDKDIVVWNAMINGYAMHG 600
Query: 176 EVQKARVVFDQMREK----DDATWSGMIKVYERKGYELEVIDLFTLMQKE 221
+ +KA +F Q RE+ D T+ G++ G E + F M++E
Sbjct: 601 DSRKALEMFVQSREQGLWPTDITFIGLLNACSHSGMVEEGREFFQSMERE 650
>gi|413947864|gb|AFW80513.1| hypothetical protein ZEAMMB73_142876 [Zea mays]
Length = 582
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 195/458 (42%), Positives = 283/458 (61%), Gaps = 2/458 (0%)
Query: 144 GRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYE 203
G + D L + N++I + G + AR +FD+M ++ +WS M+ Y
Sbjct: 126 GSLADGLLLLRTAAAVDASTFNTLITAYARAGRLADARALFDEMPARNAVSWSAMVNGYV 185
Query: 204 RKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVY 263
+ G E + +F MQ E VR + L+ VL+ CA +L+ G+ VH L ++++
Sbjct: 186 QAGDGREALRIFARMQAEDVRPDDTVLVGVLAACAQHGALEQGKWVHGYLKAHGIKINLF 245
Query: 264 VASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSG 323
+ L+ MY KCGE+ +F+ K+++ W ++I G A +G G +++ +F +M SSG
Sbjct: 246 FGTALVDMYSKCGEVQLAMDVFERMQYKNVLAWTTMIKGLAMHGRGSEAVMLFAQMESSG 305
Query: 324 VMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDA 383
+ PDD+ +GVL AC++ G V +GRE+F+SM KY ++PK EHY CMVDLL R G + +A
Sbjct: 306 IRPDDIAFIGVLCACTHAGLVDKGRELFDSMVRKYGIKPKIEHYGCMVDLLARNGFLYEA 365
Query: 384 MKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQ 443
++I+ MP EPDA+IWG+L+ CR H ++ AE AK + LEP +G Y+LLSNIYA+
Sbjct: 366 KEMIQKMPMEPDALIWGALMAGCRFHKNVEFAEYVAKHWILLEPDKSGAYVLLSNIYAAS 425
Query: 444 GRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGL 503
GR E+R MR++ V K PGCS +EV +H F D +SHP I+ +I
Sbjct: 426 GRHASAREIRHLMREKGVDKTPGCSTVEVNGVIHQFIVGD-LSHPRIKDILSKWYEIDTR 484
Query: 504 LR-EAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGD 562
+R E GY PD VL D++EEEK +L HSEKLA+A+ L+ + + +PIR+ KNLRVC D
Sbjct: 485 IRLEEGYIPDMKEVLLDIEEEEKEGALSRHSEKLAIAFALISISDNMPIRIFKNLRVCHD 544
Query: 563 CHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
CH KLISKV GREI++RD RFH FK+G CSC+DYW
Sbjct: 545 CHHVTKLISKVYGREIVVRDRTRFHLFKEGTCSCKDYW 582
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 124/270 (45%), Gaps = 16/270 (5%)
Query: 45 GGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTT 104
GF+ + D L D ++ Y + GR+ + R +FDEMP +N +SW+
Sbjct: 122 AGFL--GSLADGLLLLRTAAAVDASTFNTLITAYARAGRLADARALFDEMPARNAVSWSA 179
Query: 105 MISGYVNNNRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRI-QDAW--ELFKAMP 157
M++GYV A ++F M + ++ +L Q G + Q W KA
Sbjct: 180 MVNGYVQAGDGREALRIFARMQAEDVRPDDTVLVGVLAACAQHGALEQGKWVHGYLKAHG 239
Query: 158 MK-SVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFT 216
+K ++ +++ + GEVQ A VF++M+ K+ W+ MIK G E + LF
Sbjct: 240 IKINLFFGTALVDMYSKCGEVQLAMDVFERMQYKNVLAWTTMIKGLAMHGRGSEAVMLFA 299
Query: 217 LMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVR---CQFDVDVYVASVLITMYI 273
M+ G+R + + I VL C +D GR++ +VR + ++ Y ++ +
Sbjct: 300 QMESSGIRPDDIAFIGVLCACTHAGLVDKGRELFDSMVRKYGIKPKIEHY--GCMVDLLA 357
Query: 274 KCGELVKGKLIFDNFA-SKDIVMWNSIISG 302
+ G L + K + D ++W ++++G
Sbjct: 358 RNGFLYEAKEMIQKMPMEPDALIWGALMAG 387
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 104/231 (45%), Gaps = 17/231 (7%)
Query: 8 SWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKD 67
++ ++ Y G + +A LF +MP +N VSW+ M+ G+++ +A R+F M +D
Sbjct: 145 TFNTLITAYARAGRLADARALFDEMPARNAVSWSAMVNGYVQAGDGREALRIFARMQAED 204
Query: 68 VVAQTNMVLGY----CQDGRVDEGREIFDEMP----KKNVISWTTMISGYVNNNRIDVAR 119
V +++G Q G +++G+ + + K N+ T ++ Y + +A
Sbjct: 205 VRPDDTVLVGVLAACAQHGALEQGKWVHGYLKAHGIKINLFFGTALVDMYSKCGEVQLAM 264
Query: 120 KLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGL----GQNG 175
+FE M KN ++WT M+ G GR +A LF M + + +G+ G
Sbjct: 265 DVFERMQYKNVLAWTTMIKGLAMHGRGSEAVMLFAQMESSGIRPDDIAFIGVLCACTHAG 324
Query: 176 EVQKARVVFDQMREKDDAT-----WSGMIKVYERKGYELEVIDLFTLMQKE 221
V K R +FD M K + M+ + R G+ E ++ M E
Sbjct: 325 LVDKGRELFDSMVRKYGIKPKIEHYGCMVDLLARNGFLYEAKEMIQKMPME 375
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 101/219 (46%), Gaps = 22/219 (10%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFI----RDSRIDDA 56
MP RN VSW+AMV GYV+ G EA +F +M ++V +L G + + ++
Sbjct: 169 MPARNAVSWSAMVNGYVQAGDGREALRIFARMQAEDVRPDDTVLVGVLAACAQHGALEQG 228
Query: 57 RRLFDMMPEKDVVAQTNMVLG------YCQDGRVDEGREIFDEMPKKNVISWTTMISGYV 110
+ + + + + N+ G Y + G V ++F+ M KNV++WTTMI G
Sbjct: 229 KWVHGYLKAHGI--KINLFFGTALVDMYSKCGEVQLAMDVFERMQYKNVLAWTTMIKGLA 286
Query: 111 NNNRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAMPMK-----SV 161
+ R A LF M +++++ +L T G + ELF +M K +
Sbjct: 287 MHGRGSEAVMLFAQMESSGIRPDDIAFIGVLCACTHAGLVDKGRELFDSMVRKYGIKPKI 346
Query: 162 VASNSMILGLGQNGEVQKARVVFDQM-REKDDATWSGMI 199
M+ L +NG + +A+ + +M E D W ++
Sbjct: 347 EHYGCMVDLLARNGFLYEAKEMIQKMPMEPDALIWGALM 385
>gi|414588833|tpg|DAA39404.1| TPA: hypothetical protein ZEAMMB73_882385 [Zea mays]
Length = 668
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 214/532 (40%), Positives = 326/532 (61%), Gaps = 16/532 (3%)
Query: 83 RVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNE---VSWTAMLMG 139
R + R FDE+P N + T M SG + NN + +F M V A L+
Sbjct: 139 RPLDARRAFDEIPTPNPVIVTAMASGCMRNNLVYTTLSIFRSMVASGSAGVVDEAAALVA 198
Query: 140 YTQCGRIQDAWELFKAMPMKSVVA-------SNSMILGLGQNG--EVQKARVVFDQMREK 190
+ R+ D + S + +N++I + G ++ AR +FD M ++
Sbjct: 199 LSASARVPDRGITGGIHALVSKIGLDGQTGVANTIIDAYAKGGGHDLGAARKLFDMM-DR 257
Query: 191 DDATWSGMIKVYERKGYELEVIDLFTLMQKEG--VRVNFPSLISVLSVCASLASLDHGRQ 248
D +W+ MI +Y + G E + L++ M G VR N +L +VL CA ++ G++
Sbjct: 258 DVVSWNTMIALYAQNGLSTEALGLYSKMLIVGGDVRCNAVTLSAVLLACAHAGAIQTGKR 317
Query: 249 VHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGL 308
+H Q+VR + +VYV + ++ MY KCG++ F K+I+ W+++I+GY +G
Sbjct: 318 IHNQVVRMGLEDNVYVGTSVVDMYSKCGKVEMAWKAFQKIKGKNILSWSAMIAGYGMHGY 377
Query: 309 GEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYA 368
G+++L VF +M SG+ P+ +T + VL+ACS+ G + EGR + +MK+++ +EP EHY
Sbjct: 378 GQEALHVFTDMRKSGLKPNYITFITVLAACSHAGLLSEGRYWYNTMKTEFGIEPGVEHYG 437
Query: 369 CMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPK 428
CMVDLLGRAG +++A LI+ M +PDA +WG+LL ACR + ++LA++ A++L +L+
Sbjct: 438 CMVDLLGRAGCLDEAYGLIKEMKVKPDAALWGALLSACRIYKNVELAKICAERLFELDAT 497
Query: 429 NAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHP 488
N+G Y+LLSNIYA G + +V +R ++ R + KPPG S +E++ K H+F D SHP
Sbjct: 498 NSGYYVLLSNIYAEAGMWKEVERMRVLVKTRGIEKPPGYSSVELKGKTHLFYVGD-KSHP 556
Query: 489 EHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEG 548
++ I LEK+ + +AGY P++ VLHD+D EE+ LR HSEKLAVA+ L+ +G
Sbjct: 557 QYKEIYAYLEKLLERIHDAGYVPNTGSVLHDLDVEERESMLRIHSEKLAVAFALMNSVQG 616
Query: 549 VPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
I V+KNLRVC DCH+AIK+I+K+ GREII+RD RFHHFKDGLCSC DYW
Sbjct: 617 SVIHVIKNLRVCTDCHAAIKIITKLTGREIIIRDLKRFHHFKDGLCSCGDYW 668
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 115/255 (45%), Gaps = 25/255 (9%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM------PEKNVVSWTVMLGGFIRDSRID 54
M +R+VVSW M+ Y + G+ TEA L+ +M N V+ + +L I
Sbjct: 254 MMDRDVVSWNTMIALYAQNGLSTEALGLYSKMLIVGGDVRCNAVTLSAVLLACAHAGAIQ 313
Query: 55 DARRLFD----MMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYV 110
+R+ + M E +V T++V Y + G+V+ + F ++ KN++SW+ MI+GY
Sbjct: 314 TGKRIHNQVVRMGLEDNVYVGTSVVDMYSKCGKVEMAWKAFQKIKGKNILSWSAMIAGYG 373
Query: 111 NNNRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAMPMK-----SV 161
+ A +F M + N +++ +L + G + + + M + V
Sbjct: 374 MHGYGQEALHVFTDMRKSGLKPNYITFITVLAACSHAGLLSEGRYWYNTMKTEFGIEPGV 433
Query: 162 VASNSMILGLGQNGEVQKARVVFDQMREKDDAT-WSGMI---KVYERKGYELEVIDLFTL 217
M+ LG+ G + +A + +M+ K DA W ++ ++Y K EL I L
Sbjct: 434 EHYGCMVDLLGRAGCLDEAYGLIKEMKVKPDAALWGALLSACRIY--KNVELAKICAERL 491
Query: 218 MQKEGVRVNFPSLIS 232
+ + + L+S
Sbjct: 492 FELDATNSGYYVLLS 506
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 84/177 (47%), Gaps = 16/177 (9%)
Query: 29 FWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMM------PEKDVVAQTNMVLGYCQDG 82
+ M +++VVSW M+ + ++ +A L+ M + V + ++L G
Sbjct: 251 LFDMMDRDVVSWNTMIALYAQNGLSTEALGLYSKMLIVGGDVRCNAVTLSAVLLACAHAG 310
Query: 83 RVDEGREIFDEMPK----KNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLM 138
+ G+ I +++ + NV T+++ Y ++++A K F+ + KN +SW+AM+
Sbjct: 311 AIQTGKRIHNQVVRMGLEDNVYVGTSVVDMYSKCGKVEMAWKAFQKIKGKNILSWSAMIA 370
Query: 139 GYTQCGRIQDAWELFKAMPMKSVVASN-----SMILGLGQNGEVQKARVVFDQMREK 190
GY G Q+A +F M KS + N +++ G + + R ++ M+ +
Sbjct: 371 GYGMHGYGQEALHVFTDM-RKSGLKPNYITFITVLAACSHAGLLSEGRYWYNTMKTE 426
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Query: 246 GRQVHAQLVRCQ-FDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYA 304
GRQ+H +R F D Y AS L+ MY C + + FD + + V+ ++ SG
Sbjct: 107 GRQLHLLALRSGLFPSDAYCASALLHMYHHCFRPLDARRAFDEIPTPNPVIVTAMASGCM 166
Query: 305 QYGLGEKSLKVFHEMFSSG 323
+ L +L +F M +SG
Sbjct: 167 RNNLVYTTLSIFRSMVASG 185
>gi|357121594|ref|XP_003562503.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Brachypodium distachyon]
Length = 544
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 200/499 (40%), Positives = 309/499 (61%), Gaps = 5/499 (1%)
Query: 103 TTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVV 162
I GY + R+ AR++F+ MP ++ VS+ +M+ GY G + A LF+ + + V
Sbjct: 50 NAFIQGYCSAGRVTDARRVFDGMPRRDTVSFNSMIHGYAVSGDVGSAQRLFERVLAPTPV 109
Query: 163 ASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEG 222
SM+ G + G+V+ AR VF++M E+D +W+ MI +E + LF M +EG
Sbjct: 110 TWTSMVAGFCRAGDVESARRVFEEMPERDLVSWNAMISGCVGNRLPVEALCLFRWMMEEG 169
Query: 223 VRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGK 282
N +++SVLS C +L+ G+ VH + + + D ++ + L+ MY KCG +
Sbjct: 170 FVPNRGTVVSVLSACTGAGALETGKWVHVFVEKKRLRWDEFLGTALVDMYAKCGAVELAL 229
Query: 283 LIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSG-VMPDDVTLVGVLSACSYT 341
+F +++ WN++I+G A G K+L +F +M +G V PD+VT VGVL ACS+
Sbjct: 230 EVFTGLRARNTCTWNAMINGLAMNGYSAKALDMFRQMELNGTVAPDEVTFVGVLLACSHA 289
Query: 342 GKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGS 401
G V G+E F ++ KY VE EHYACMVDLL R+G +++A KLI MP +PD ++W +
Sbjct: 290 GFVDAGKEHFYTIPQKYGVELILEHYACMVDLLARSGHLQEAHKLITEMPMKPDVVVWRA 349
Query: 402 LLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNV 461
LLG CR H + +AE + ++E +G ++LLSN+YA+ GR++ V ++R+ MR + +
Sbjct: 350 LLGGCRLHKNVKMAE---NVISEMEATCSGDHVLLSNLYAAVGRWNGVEDVRRTMRSKGI 406
Query: 462 IKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVD 521
K PGCS +E++ +H F D SHP + I L +IGG +++ GY +++ V +D++
Sbjct: 407 EKIPGCSSVEMDGSIHEFISGD-KSHPSYDDIHAKLIEIGGRMQQHGYVTETAEVFYDIE 465
Query: 522 EEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILR 581
+EEK +L YHSEKLA+A+GL+ P IR++KNLR C DCHS KL+SK+ REI++R
Sbjct: 466 DEEKEQALGYHSEKLAIAFGLIGGPPEATIRIVKNLRFCTDCHSFAKLVSKIYHREIVVR 525
Query: 582 DANRFHHFKDGLCSCRDYW 600
D RFHHF+ G CSC D+W
Sbjct: 526 DRARFHHFRGGACSCNDFW 544
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 93/360 (25%), Positives = 176/360 (48%), Gaps = 17/360 (4%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVV 69
A ++GY G +T+A +F MP ++ VS+ M+ G+ + A+RLF+ + V
Sbjct: 50 NAFIQGYCSAGRVTDARRVFDGMPRRDTVSFNSMIHGYAVSGDVGSAQRLFERVLAPTPV 109
Query: 70 AQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEK- 128
T+MV G+C+ G V+ R +F+EMP+++++SW MISG V N A LF M E+
Sbjct: 110 TWTSMVAGFCRAGDVESARRVFEEMPERDLVSWNAMISGCVGNRLPVEALCLFRWMMEEG 169
Query: 129 ---NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSV----VASNSMILGLGQNGEVQKAR 181
N + ++L T G ++ + + K + +++ + G V+ A
Sbjct: 170 FVPNRGTVVSVLSACTGAGALETGKWVHVFVEKKRLRWDEFLGTALVDMYAKCGAVELAL 229
Query: 182 VVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEG-VRVNFPSLISVLSVCASL 240
VF +R ++ TW+ MI GY + +D+F M+ G V + + + VL C+
Sbjct: 230 EVFTGLRARNTCTWNAMINGLAMNGYSAKALDMFRQMELNGTVAPDEVTFVGVLLACSHA 289
Query: 241 ASLDHGRQVHAQLVRCQFDVDVYVA--SVLITMYIKCGELVKG-KLIFDNFASKDIVMWN 297
+D G++ H + ++ V++ + + ++ + + G L + KLI + D+V+W
Sbjct: 290 GFVDAGKE-HFYTIPQKYGVELILEHYACMVDLLARSGHLQEAHKLITEMPMKPDVVVWR 348
Query: 298 SIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSK 357
+++ G + + + V EM ++ D V L + +A V++ R +M+SK
Sbjct: 349 ALLGGCRLHKNVKMAENVISEMEAT-CSGDHVLLSNLYAAVGRWNGVEDVR---RTMRSK 404
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 134/285 (47%), Gaps = 21/285 (7%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MP R+ VS+ +M+ GY G + A LF ++ V+WT M+ GF R ++ ARR+F
Sbjct: 72 MPRRDTVSFNSMIHGYAVSGDVGSAQRLFERVLAPTPVTWTSMVAGFCRAGDVESARRVF 131
Query: 61 DMMPEKDVVAQTNMVLGYCQDGRVD-EGREIFDEMPKKNVI----SWTTMISGYVNNNRI 115
+ MPE+D+V+ M+ G C R+ E +F M ++ + + +++S +
Sbjct: 132 EEMPERDLVSWNAMISG-CVGNRLPVEALCLFRWMMEEGFVPNRGTVVSVLSACTGAGAL 190
Query: 116 DVARKLFEVMPEKNEVSW-----TAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILG 170
+ K V EK + W TA++ Y +CG ++ A E+F + ++ N+MI G
Sbjct: 191 ETG-KWVHVFVEKKRLRWDEFLGTALVDMYAKCGAVELALEVFTGLRARNTCTWNAMING 249
Query: 171 LGQNGEVQKARVVFDQMR-----EKDDATWSGMIKVYERKGY-ELEVIDLFTLMQKEGVR 224
L NG KA +F QM D+ T+ G++ G+ + +T+ QK GV
Sbjct: 250 LAMNGYSAKALDMFRQMELNGTVAPDEVTFVGVLLACSHAGFVDAGKEHFYTIPQKYGVE 309
Query: 225 VNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLI 269
+ ++ + LA H ++ H + DV V L+
Sbjct: 310 LILEHYACMVDL---LARSGHLQEAHKLITEMPMKPDVVVWRALL 351
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 99/252 (39%), Gaps = 26/252 (10%)
Query: 226 NFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIF 285
F SL+ + + A H +HA + F + + I Y G + + +F
Sbjct: 10 TFLSLLKSAASASPSAYSHHLPSLHAVCTKLGFLLCTRTNNAFIQGYCSAGRVTDARRVF 69
Query: 286 DNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVK 345
D +D V +NS+I GYA G + ++F + + P VT +++ G V+
Sbjct: 70 DGMPRRDTVSFNSMIHGYAVSGDVGSAQRLFERVLA----PTPVTWTSMVAGFCRAGDVE 125
Query: 346 EGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAM---PFEPDAIIWGSL 402
R +FE M + LV C+ + L VE A+ L M F P+ S+
Sbjct: 126 SARRVFEEMPERDLVSWNAMISGCVGNRL----PVE-ALCLFRWMMEEGFVPNRGTVVSV 180
Query: 403 LGACRTHMKLDLAE-----VAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMR 457
L AC L+ + V K+L E L ++YA G E+ +R
Sbjct: 181 LSACTGAGALETGKWVHVFVEKKRLRWDEFLGTA----LVDMYAKCGAVELALEVFTGLR 236
Query: 458 KRNVIKPPGCSW 469
RN C+W
Sbjct: 237 ARNT-----CTW 243
>gi|413943701|gb|AFW76350.1| hypothetical protein ZEAMMB73_198527 [Zea mays]
Length = 515
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 209/522 (40%), Positives = 314/522 (60%), Gaps = 22/522 (4%)
Query: 94 MPKKNVISWTTMISGYVNNNR----IDVARKLFE--VMPEKNEVSWTAMLMGYTQCGRIQ 147
MP + +SWT +I+ Y++ I VAR+ F + P+ S+TA+ + T C R+
Sbjct: 1 MPHPSTVSWTALIAAYMDAGHALEAIGVARRAFASGMRPD----SFTAVRV-LTACARVA 55
Query: 148 D------AWELFKAMP--MKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMI 199
D W + +SV + + + + GE++KAR VFD+M+ +D W M+
Sbjct: 56 DLETGEAVWAAARQEEGVAESVFVATAALDLYVKCGEMEKARSVFDEMKNRDAVAWGAMV 115
Query: 200 KVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFD 259
Y G+ E +DLF MQ EG + + +++ LS C L +LD GRQ + +
Sbjct: 116 GGYASNGHPREALDLFFAMQMEGAKPDCYTVVGALSACTRLGALDLGRQAVGMVHWDEVL 175
Query: 260 VDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEM 319
+ + + LI MY KCG + ++F +DI++WN++I G G + + + +M
Sbjct: 176 GNPVLGTALIDMYAKCGSTSEAWMVFQQMLERDIIVWNAMILGLGMTGHEKIAFALVGQM 235
Query: 320 FSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQ 379
SGV +D T +G+L +C++TG V +GR+ F +M Y + P+ EHY CMVDL RAG
Sbjct: 236 KKSGVKLNDNTFIGLLCSCTHTGLVNDGRQYFHNMTHVYRISPRIEHYGCMVDLFSRAGL 295
Query: 380 VEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNI 439
+E+A +LI MP +A++WG+LLG C+ H DLAE A K+L++LEP N+G Y++LSNI
Sbjct: 296 LEEAHQLIGDMPMLANAVVWGALLGGCKIHRNADLAEHALKQLIRLEPWNSGNYVMLSNI 355
Query: 440 YASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMF-TGRDCVSHPEHPMIMRMLE 498
Y++ GR+ D A+LR M+ + + K P SW+E++ KVH F G D SHP I L+
Sbjct: 356 YSNSGRWEDAAKLRLEMKAKGIEKVPASSWVELDGKVHKFYVGDD--SHPLSDKIYAKLD 413
Query: 499 KIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLR 558
++G ++ GY P + V+ DV+ EEK ++L +HSEK+A+A+ L+ G IRV KNLR
Sbjct: 414 ELGMEMKAMGYEPTTEVVMFDVENEEKENTLVHHSEKIAIAFSLITTEPGETIRVTKNLR 473
Query: 559 VCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
VC DCHSAIKLIS++ REI++RD NRFH F+DG CSC DYW
Sbjct: 474 VCTDCHSAIKLISRITCREIVVRDNNRFHCFRDGHCSCNDYW 515
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 80/369 (21%), Positives = 147/369 (39%), Gaps = 88/369 (23%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTL----FWQMPEKNVVSWTVMLGGFIRDSRIDDA 56
MP + VSWTA++ Y++ G EA + F + + +L R + ++
Sbjct: 1 MPHPSTVSWTALIAAYMDAGHALEAIGVARRAFASGMRPDSFTAVRVLTACARVADLETG 60
Query: 57 RRLFDMMPEKDVVAQTNMVLG-----YCQDGRVDEGREIFDEMPKKNVISWTTMISGYVN 111
++ +++ VA++ V Y + G +++ R +FDEM ++ ++W M+ GY +
Sbjct: 61 EAVWAAARQEEGVAESVFVATAALDLYVKCGEMEKARSVFDEMKNRDAVAWGAMVGGYAS 120
Query: 112 NNRIDVARKLFEVM------PE---------------------------------KNEVS 132
N A LF M P+ N V
Sbjct: 121 NGHPREALDLFFAMQMEGAKPDCYTVVGALSACTRLGALDLGRQAVGMVHWDEVLGNPVL 180
Query: 133 WTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDD 192
TA++ Y +CG +AW +F+ M + ++ N+MILGLG G + A + QM+
Sbjct: 181 GTALIDMYAKCGSTSEAWMVFQQMLERDIIVWNAMILGLGMTGHEKIAFALVGQMK---- 236
Query: 193 ATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQ 252
K GV++N + I +L C ++ GRQ
Sbjct: 237 ---------------------------KSGVKLNDNTFIGLLCSCTHTGLVNDGRQYFHN 269
Query: 253 LV---RCQFDVDVYVASVLITMYIKCGELVKG-KLIFDNFASKDIVMWNSIISG---YAQ 305
+ R ++ Y ++ ++ + G L + +LI D + V+W +++ G +
Sbjct: 270 MTHVYRISPRIEHY--GCMVDLFSRAGLLEEAHQLIGDMPMLANAVVWGALLGGCKIHRN 327
Query: 306 YGLGEKSLK 314
L E +LK
Sbjct: 328 ADLAEHALK 336
>gi|356561464|ref|XP_003549001.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Glycine max]
Length = 673
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 216/608 (35%), Positives = 336/608 (55%), Gaps = 35/608 (5%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRL- 59
+PERNV+ + M+R Y+ + +A +F M ++ D R+
Sbjct: 93 IPERNVIFYNVMIRSYMNNHLYDDALLVFRDMVSGGFSPDHYTYPCVLKACSCSDNLRIG 152
Query: 60 -------FDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
F + + ++ ++ Y + G + E R + DEM K+V+SW +M++GY N
Sbjct: 153 LQLHGAVFKVGLDLNLFVGNGLIALYGKCGCLPEARCVLDEMQSKDVVSWNSMVAGYAQN 212
Query: 113 NRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLG 172
+ D A ++ E + V DA + +P + +S +++
Sbjct: 213 MQFDDA---LDICREMDGVRQKP------------DACTMASLLPAVTNTSSENVLY--- 254
Query: 173 QNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLIS 232
+F + +K +W+ MI VY + + +DL+ M K V + + S
Sbjct: 255 -------VEEMFMNLEKKSLVSWNVMISVYMKNSMPGKSVDLYLQMGKCEVEPDAITCAS 307
Query: 233 VLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKD 292
VL C L++L GR++H + R + ++ + + LI MY +CG L K +FD +D
Sbjct: 308 VLRACGDLSALLLGRRIHEYVERKKLCPNMLLENSLIDMYARCGCLEDAKRVFDRMKFRD 367
Query: 293 IVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFE 352
+ W S+IS Y G G ++ +F EM +SG PD + V +LSACS++G + EG+ F+
Sbjct: 368 VASWTSLISAYGMTGQGYNAVALFTEMQNSGQSPDSIAFVAILSACSHSGLLNEGKFYFK 427
Query: 353 SMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKL 412
M Y + P EH+AC+VDLLGR+G+V++A +I+ MP +P+ +WG+LL +CR + +
Sbjct: 428 QMTDDYKITPIIEHFACLVDLLGRSGRVDEAYNIIKQMPMKPNERVWGALLSSCRVYSNM 487
Query: 413 DLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEV 472
D+ +AA KLLQL P+ +G Y+LLSNIYA GR+ +V +R M++R + K PG S +E+
Sbjct: 488 DIGILAADKLLQLAPEESGYYVLLSNIYAKAGRWTEVTAIRSLMKRRRIRKMPGISNVEL 547
Query: 473 EKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYH 532
+VH F D HP+ I L + G ++E GY P + LHDV+EE+K L H
Sbjct: 548 NNQVHTFLAGD-TYHPQSKEIYEELSVLVGKMKELGYVPKTDSALHDVEEEDKECHLAVH 606
Query: 533 SEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDG 592
SEKLA+ + ++ E PIR+ KNLRVCGDCH A KLISK++ REI++RD NRFHHFKDG
Sbjct: 607 SEKLAIVFAILNTQES-PIRITKNLRVCGDCHIAAKLISKIVQREIVIRDTNRFHHFKDG 665
Query: 593 LCSCRDYW 600
+CSC DYW
Sbjct: 666 ICSCGDYW 673
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 80/169 (47%), Gaps = 2/169 (1%)
Query: 247 RQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQY 306
+ VH+++ F + + L+ Y GE + +FD ++++ +N +I Y
Sbjct: 52 KNVHSKVFNLSFHENPSLGIKLMRAYAARGEPGLARNVFDVIPERNVIFYNVMIRSYMNN 111
Query: 307 GLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEH 366
L + +L VF +M S G PD T VL ACS + ++ G ++ ++ K ++
Sbjct: 112 HLYDDALLVFRDMVSGGFSPDHYTYPCVLKACSCSDNLRIGLQLHGAV-FKVGLDLNLFV 170
Query: 367 YACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLA 415
++ L G+ G + +A +++ M D + W S++ +M+ D A
Sbjct: 171 GNGLIALYGKCGCLPEARCVLDEMQ-SKDVVSWNSMVAGYAQNMQFDDA 218
>gi|356503988|ref|XP_003520781.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 771
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 214/616 (34%), Positives = 352/616 (57%), Gaps = 22/616 (3%)
Query: 2 PERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEK----NVVSWTVMLGGFIRDSRIDDAR 57
P NVV+WT ++ +A T F +M N +++ +L + + + +
Sbjct: 161 PSTNVVTWTTLINQLSRSNKPFQALTFFNRMRTTGIYPNHFTFSAILPACAHAALLSEGQ 220
Query: 58 RLFDMMPE----KDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNN 113
++ ++ + D T ++ Y + G + +FDEMP +N++SW +MI G+V N
Sbjct: 221 QIHALIHKHCFLNDPFVATALLDMYAKCGSMLLAENVFDEMPHRNLVSWNSMIVGFVKNK 280
Query: 114 ----RIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVA----SN 165
I V R++ + P+ +VS +++L + ++ ++ + +V N
Sbjct: 281 LYGRAIGVFREVLSLGPD--QVSISSVLSACAGLVELDFGKQVHGSIVKRGLVGLVYVKN 338
Query: 166 SMILGLGQNGEVQKARVVFDQMREKDDATWSGMI-KVYERKGYELEVIDLFTLMQKEGVR 224
S++ + G + A +F ++D TW+ MI + + +E + F M +EGV
Sbjct: 339 SLVDMYCKCGLFEDATKLFCGGGDRDVVTWNVMIMGCFRCRNFE-QACTYFQAMIREGVE 397
Query: 225 VNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLI 284
+ S S+ AS+A+L G +H+ +++ + ++S L+TMY KCG ++ +
Sbjct: 398 PDEASYSSLFHASASIAALTQGTMIHSHVLKTGHVKNSRISSSLVTMYGKCGSMLDAYQV 457
Query: 285 FDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKV 344
F ++V W ++I+ + Q+G +++K+F EM + GV+P+ +T V VLSACS+TGK+
Sbjct: 458 FRETKEHNVVCWTAMITVFHQHGCANEAIKLFEEMLNEGVVPEYITFVSVLSACSHTGKI 517
Query: 345 KEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLG 404
+G + F SM + + ++P EHYACMVDLLGR G++E+A + IE+MPFEPD+++WG+LLG
Sbjct: 518 DDGFKYFNSMANVHNIKPGLEHYACMVDLLGRVGRLEEACRFIESMPFEPDSLVWGALLG 577
Query: 405 ACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKP 464
AC H +++ A++L +LEP N G Y+LLSNIY G + E+R+ M V K
Sbjct: 578 ACGKHANVEMGREVAERLFKLEPDNPGNYMLLSNIYIRHGMLEEADEVRRLMGINGVRKE 637
Query: 465 PGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEE 524
GCSWI+V+ + +F D SH I ML+K+ L++ GY ++ F + V+ E
Sbjct: 638 SGCSWIDVKNRTFVFNAND-RSHSRTQEIYGMLQKLKELIKRRGYVAETQFATNSVEGSE 696
Query: 525 KVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDAN 584
+ SL HSEKLA+A+GL+ LP G P+R+ KNLR CGDCH+ +K S++ REII+RD N
Sbjct: 697 E-QSLWCHSEKLALAFGLLVLPPGSPVRIKKNLRTCGDCHTVMKFASEIFQREIIVRDIN 755
Query: 585 RFHHFKDGLCSCRDYW 600
RFH F +G CSC DYW
Sbjct: 756 RFHRFTNGSCSCMDYW 771
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 90/400 (22%), Positives = 174/400 (43%), Gaps = 55/400 (13%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM----PEKNVVSWTVMLGGFIRDSRIDDA 56
MP RN+VSW +M+ G+V+ + A +F ++ P++ VS + +L +D
Sbjct: 261 MPHRNLVSWNSMIVGFVKNKLYGRAIGVFREVLSLGPDQ--VSISSVLSACAGLVELDFG 318
Query: 57 RRLFDMMPEKDVVA----QTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+++ + ++ +V + ++V YC+ G ++ ++F ++V++W MI G
Sbjct: 319 KQVHGSIVKRGLVGLVYVKNSLVDMYCKCGLFEDATKLFCGGGDRDVVTWNVMIMGCFRC 378
Query: 113 NRIDVARKLFEVM----PEKNEVSWTAMLMGYTQCGRIQDAW----ELFKAMPMKSVVAS 164
+ A F+ M E +E S++++ + + K +K+ S
Sbjct: 379 RNFEQACTYFQAMIREGVEPDEASYSSLFHASASIAALTQGTMIHSHVLKTGHVKNSRIS 438
Query: 165 NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVR 224
+S++ G+ G + A VF + +E + W+ MI V+ + G E I LF M EGV
Sbjct: 439 SSLVTMYGKCGSMLDAYQVFRETKEHNVVCWTAMITVFHQHGCANEAIKLFEEMLNEGVV 498
Query: 225 VNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLI 284
+ + +SVLS C+ +D G + Y S+ IK G
Sbjct: 499 PEYITFVSVLSACSHTGKIDDGFK--------------YFNSMANVHNIKPG-------- 536
Query: 285 FDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKV 344
+++A ++ + G E++ + M PD + +L AC V
Sbjct: 537 LEHYA--------CMVDLLGRVGRLEEACRFIESM---PFEPDSLVWGALLGACGKHANV 585
Query: 345 KEGREIFESMKSKYLVEPKTE-HYACMVDLLGRAGQVEDA 383
+ GRE+ E + + +EP +Y + ++ R G +E+A
Sbjct: 586 EMGREVAERL---FKLEPDNPGNYMLLSNIYIRHGMLEEA 622
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 123/252 (48%), Gaps = 18/252 (7%)
Query: 159 KSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLM 218
KS+ + +LGL + +VQK + R K ++ + G+ + + L+ LFT
Sbjct: 33 KSIFGFSLSLLGLEEKLQVQK-----ENARSKPNSNFEGLGPMSREVAFWLQ---LFTSY 84
Query: 219 QKEGVRVN----FPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIK 274
Q + + P L +L+ A L SL H Q+H+QLV + + L+ +Y K
Sbjct: 85 QSGVPKFHQFSSVPDLKHLLNNAAKLKSLKHATQIHSQLVTTNNHASLANINTLLLLYAK 144
Query: 275 CGELVKGKLIFDNF--ASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLV 332
CG + L+F+ + S ++V W ++I+ ++ ++L F+ M ++G+ P+ T
Sbjct: 145 CGSIHHTLLLFNTYPHPSTNVVTWTTLINQLSRSNKPFQALTFFNRMRTTGIYPNHFTFS 204
Query: 333 GVLSACSYTGKVKEGREIFESM-KSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMP 391
+L AC++ + EG++I + K +L +P ++D+ + G + A + + MP
Sbjct: 205 AILPACAHAALLSEGQQIHALIHKHCFLNDPFVA--TALLDMYAKCGSMLLAENVFDEMP 262
Query: 392 FEPDAIIWGSLL 403
+ + W S++
Sbjct: 263 HR-NLVSWNSMI 273
>gi|147789959|emb|CAN73858.1| hypothetical protein VITISV_024322 [Vitis vinifera]
Length = 1539
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 234/654 (35%), Positives = 367/654 (56%), Gaps = 58/654 (8%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
+ + V +V Y + G I +A ++F M EK+ VSW ++ G ++ +DA F
Sbjct: 890 LNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAESF 949
Query: 61 ------DMMP---------------------------------EKDVVAQTNMVLGYCQD 81
MP + DV ++ Y +
Sbjct: 950 LRMRRTGSMPSNFTLISTLSSCASLGWIMLGEQIHCDGLKLGLDTDVSVSNALLALYAET 1009
Query: 82 GRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARK---LFEVMPEK---NEVSWTA 135
G E ++F MP+ + +SW ++I G ++++ V++ E+M + V++
Sbjct: 1010 GCFTECLKVFSLMPEYDQVSWNSVI-GALSDSEASVSQAVKYFLEMMRGGWGLSRVTFIN 1068
Query: 136 MLMGYTQCGRIQDAWELFKAMPMKSVVA-----SNSMILGLGQNGEVQKARVVFDQMRE- 189
+L + + + A+ +K ++ N+++ G+ GE+ + +F +M E
Sbjct: 1069 ILSAVSSLS-LHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSET 1127
Query: 190 KDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQV 249
+D+ +W+ MI Y + +DL M ++G R++ + +VLS CAS+A+L+ G +V
Sbjct: 1128 RDEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATVLSACASVATLERGMEV 1187
Query: 250 HAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLG 309
HA +R + DV V S L+ MY KCG + F+ +++ WNS+ISGYA++G G
Sbjct: 1188 HACGIRACMESDVVVGSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHG 1247
Query: 310 EKSLKVFHEMFSSGVMPDDVT-LVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYA 368
EK+LK+F M G PD V L+GVLSACS+ G V+EG E F+SM Y + P+ EH++
Sbjct: 1248 EKALKLFTRMMLDGQPPDHVAPLLGVLSACSHVGFVEEGFEHFKSMSEVYRLSPRVEHFS 1307
Query: 369 CMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGAC--RTHMKLDLAEVAAKKLLQLE 426
CMVDLLGRAG++++ I +MP +P+ +IW ++LGAC +L AA+ LL+LE
Sbjct: 1308 CMVDLLGRAGKLDEVGDFINSMPMKPNVLIWRTVLGACCRANGRNTELGRRAAEMLLELE 1367
Query: 427 PKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVS 486
P+NA Y+LL+N+YAS ++ DVA+ R M++ V K GCSW+ ++ VH+F D +
Sbjct: 1368 PQNAVNYVLLANMYASGEKWEDVAKARXAMKEAAVKKEAGCSWVTMKDGVHVFVAGDKL- 1426
Query: 487 HPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLP 546
HPE I L ++ +R+AGY P + + L D++ E K L YHSEK+AVA+ L +
Sbjct: 1427 HPEKDXIYDKLRELNRKMRDAGYIPQTKYALFDLELENKEELLSYHSEKIAVAFVLTR-Q 1485
Query: 547 EGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
+PIR+MKNLRVCGDCHSA ISK++GR+I+LRD+NRFHHF+DG CSC DYW
Sbjct: 1486 SALPIRIMKNLRVCGDCHSAFGYISKIVGRQIVLRDSNRFHHFEDGKCSCGDYW 1539
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 107/386 (27%), Positives = 188/386 (48%), Gaps = 30/386 (7%)
Query: 78 YCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEK----NEVSW 133
Y + G + +++FDEM +N+++W +ISGY N + D A F M N ++
Sbjct: 589 YVRIGDLGSAQKLFDEMSNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAF 648
Query: 134 TAMLMGYTQCGR------IQDAWELFKAMPMKSVVASNSMILGLGQN-GEVQKARVVFDQ 186
+ L + G +Q + K VV N +I G AR VFD+
Sbjct: 649 GSALRACQESGPSGCKLGVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDR 708
Query: 187 MREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNF-PSLISVLS-VCASLASLD 244
+ ++ +W+ +I VY R+G + DLF+ MQKEG+ +F P+ + S + A+ +S+D
Sbjct: 709 IGIRNSISWNSIISVYSRRGDXVSAYDLFSSMQKEGLGFSFKPNEYTFGSLITAACSSVD 768
Query: 245 HG----RQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSII 300
G Q+ A++ + F D+YV S L++ + + G K IF+ +++V N ++
Sbjct: 769 FGLCVLEQMLARVEKSGFLQDLYVGSALVSGFARFGLTDDAKNIFEQMGVRNVVSMNGLM 828
Query: 301 SGYAQYGLGEKSLKVFHEMFS-SGVMPDDVTLVGVLSACSYTGKVKE----GREIFESMK 355
G + GE + KVFHEM G+ D + V +LSA S ++E GRE+ +
Sbjct: 829 VGLVKQKQGEAAAKVFHEMKDLVGINSD--SYVVLLSAFSEFSVLEEGRRKGREVHAHVI 886
Query: 356 SKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLA 415
L + K +V++ ++G + DA + E M E D++ W SL+ + + +
Sbjct: 887 RTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELM-VEKDSVSWNSLISGLDQN---ECS 942
Query: 416 EVAAKKLLQLEPKNAGP--YILLSNI 439
E AA+ L++ + P + L+S +
Sbjct: 943 EDAAESFLRMRRTGSMPSNFTLISTL 968
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 106/436 (24%), Positives = 193/436 (44%), Gaps = 35/436 (8%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIR------DSRID 54
M RN+V+W ++ GY + G EA F M + G +R S
Sbjct: 605 MSNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCK 664
Query: 55 DARRLFDMMPE----KDVVAQTNMV--LGYCQDGRVDEGREIFDEMPKKNVISWTTMISG 108
++ ++ + DVV ++ G C D ++ R +FD + +N ISW ++IS
Sbjct: 665 LGVQIHGLISKTRYGSDVVVCNVLISMYGSCLDS-ANDARSVFDRIGIRNSISWNSIISV 723
Query: 109 YVNNNRIDVARKLFEVMPEK--------NEVSWTAMLMG------YTQCGRIQDAWELFK 154
Y A LF M ++ NE ++ +++ + C Q + K
Sbjct: 724 YSRRGDXVSAYDLFSSMQKEGLGFSFKPNEYTFGSLITAACSSVDFGLCVLEQMLARVEK 783
Query: 155 AMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDL 214
+ ++ + ++++ G + G A+ +F+QM ++ + +G++ ++ +
Sbjct: 784 SGFLQDLYVGSALVSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKV 843
Query: 215 FTLMQKEGVRVNFPSLISVLSVCASLASLDH----GRQVHAQLVRCQF-DVDVYVASVLI 269
F M K+ V +N S + +LS + + L+ GR+VHA ++R D V + + L+
Sbjct: 844 FHEM-KDLVGINSDSYVVLLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLV 902
Query: 270 TMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDV 329
MY K G + +F+ KD V WNS+ISG Q E + + F M +G MP +
Sbjct: 903 NMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAESFLRMRRTGSMPSNF 962
Query: 330 TLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEA 389
TL+ LS+C+ G + G +I K ++ ++ L G + +K+
Sbjct: 963 TLISTLSSCASLGWIMLGEQI-HCDGLKLGLDTDVSVSNALLALYAETGCFTECLKVFSL 1021
Query: 390 MPFEPDAIIWGSLLGA 405
MP E D + W S++GA
Sbjct: 1022 MP-EYDQVSWNSVIGA 1036
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 102/429 (23%), Positives = 188/429 (43%), Gaps = 28/429 (6%)
Query: 4 RNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV-VSWT---VMLGGFIRD--SRIDDAR 57
RN +SW +++ Y G A LF M ++ + S+ G I S +D
Sbjct: 712 RNSISWNSIISVYSRRGDXVSAYDLFSSMQKEGLGFSFKPNEYTFGSLITAACSSVDFGL 771
Query: 58 RLFDMMPEK--------DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGY 109
+ + M + D+ + +V G+ + G D+ + IF++M +NV+S ++ G
Sbjct: 772 CVLEQMLARVEKSGFLQDLYVGSALVSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGL 831
Query: 110 VNNNRIDVARKLFEVMPEK---NEVSWTAMLMGYTQC---------GRIQDAWELFKAMP 157
V + + A K+F M + N S+ +L +++ GR A + +
Sbjct: 832 VKQKQGEAAAKVFHEMKDLVGINSDSYVVLLSAFSEFSVLEEGRRKGREVHAHVIRTGLN 891
Query: 158 MKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTL 217
V N ++ ++G + A VF+ M EKD +W+ +I ++ + + F
Sbjct: 892 DNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAESFLR 951
Query: 218 MQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGE 277
M++ G + +LIS LS CASL + G Q+H ++ D DV V++ L+ +Y + G
Sbjct: 952 MRRTGSMPSNFTLISTLSSCASLGWIMLGEQIHCDGLKLGLDTDVSVSNALLALYAETGC 1011
Query: 278 LVKGKLIFDNFASKDIVMWNSIISGYAQYGLG-EKSLKVFHEMFSSGVMPDDVTLVGVLS 336
+ +F D V WNS+I + +++K F EM G VT + +LS
Sbjct: 1012 FTECLKVFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLEMMRGGWGLSRVTFINILS 1071
Query: 337 ACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDA 396
A S + + E ++ KY + T ++ G+ G++ + K+ M D
Sbjct: 1072 AVS-SLSLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDE 1130
Query: 397 IIWGSLLGA 405
+ W S++
Sbjct: 1131 VSWNSMISG 1139
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 66/118 (55%), Gaps = 7/118 (5%)
Query: 227 FPSLISVL--SVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLI 284
F SLI+ S C+ + R++H Q ++ F ++++++ LI +Y++ G+L + +
Sbjct: 547 FESLINRYQGSCCS-----EEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKL 601
Query: 285 FDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTG 342
FD +++++V W +ISGY Q G +++ F +M +G +P+ L AC +G
Sbjct: 602 FDEMSNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESG 659
>gi|449436862|ref|XP_004136211.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Cucumis sativus]
gi|449508034|ref|XP_004163198.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Cucumis sativus]
Length = 606
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 207/526 (39%), Positives = 317/526 (60%), Gaps = 10/526 (1%)
Query: 84 VDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEK----NEVSWTAMLMG 139
+D IF ++ + + TMI GYVNN + A L+ M ++ + ++ +L
Sbjct: 82 MDYACSIFQQLDEPTTFDFNTMIRGYVNNMNFENAIYLYNDMLQREVEPDNFTYPVVLKA 141
Query: 140 YTQCGRIQDAWEL----FKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATW 195
+ IQ+ ++ FK V NS+I G+ +++ + +F +M +K A+W
Sbjct: 142 CARLAVIQEGMQIHGHVFKLGLEDDVYVQNSLINMYGKCRDIEMSCAIFRRMEQKSVASW 201
Query: 196 SGMIKVYERKGYELEVIDLFTLMQKEGV-RVNFPSLISVLSVCASLASLDHGRQVHAQLV 254
S +I + E + LF M +EG R L++VLS C L + GR H L+
Sbjct: 202 SAIIAAHASLAMWWECLALFEDMSREGCWRAEESILVNVLSACTHLGAFHLGRCAHGSLL 261
Query: 255 RCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLK 314
+ +++V V + L+ MY+KCG L KG +F N K+ + ++ IISG +G G ++L+
Sbjct: 262 KNITELNVAVMTSLMDMYVKCGSLQKGLCLFQNMTRKNQLSYSVIISGLGLHGYGRQALQ 321
Query: 315 VFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLL 374
+F EM G+ PDDVT V VLSACS++G V EG ++F+ MK +Y +EP +HY CMVDL
Sbjct: 322 IFSEMVEEGLEPDDVTYVSVLSACSHSGLVDEGLDLFDKMKFEYRIEPTMQHYGCMVDLK 381
Query: 375 GRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYI 434
GRAG +E+A +L+++MP + + ++W SLL AC+ H L L E+AA+ L +L N Y+
Sbjct: 382 GRAGLLEEAFQLVQSMPIKANDVLWRSLLSACKVHDNLKLGEIAAENLFRLSSHNPSDYL 441
Query: 435 LLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIM 494
+LSN+YA ++ + A++R M R +I+ PG S +EV+ KV+ F +D S+ + I
Sbjct: 442 VLSNMYARAQQWENAAKIRTKMINRGLIQTPGYSLVEVKSKVYKFVSQD-KSYCKSGNIY 500
Query: 495 RMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVM 554
+M+ ++ LR GY PD+S V+ DVDEEEK L+ HS+KLA+A+ L+ +G IR++
Sbjct: 501 KMIHQMEWQLRFEGYMPDTSQVMLDVDEEEKGERLKGHSQKLAIAFALIHTSQGSAIRII 560
Query: 555 KNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
+NLR+C DCHS KL+S + REI +RD NRFHHFKDG CSCRDYW
Sbjct: 561 RNLRMCNDCHSYTKLVSMIYEREITVRDRNRFHHFKDGNCSCRDYW 606
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 109/242 (45%), Gaps = 27/242 (11%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLF--------WQMPEK---NVVSWTVMLGGFIR 49
M +++V SW+A++ + M E LF W+ E NV+S LG F
Sbjct: 193 MEQKSVASWSAIIAAHASLAMWWECLALFEDMSREGCWRAEESILVNVLSACTHLGAFHL 252
Query: 50 DSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGY 109
+ L + E +V T+++ Y + G + +G +F M +KN +S++ +ISG
Sbjct: 253 GRCAHGS--LLKNITELNVAVMTSLMDMYVKCGSLQKGLCLFQNMTRKNQLSYSVIISGL 310
Query: 110 VNNNRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASN 165
+ A ++F M E+ ++V++ ++L + G + + +LF M + +
Sbjct: 311 GLHGYGRQALQIFSEMVEEGLEPDDVTYVSVLSACSHSGLVDEGLDLFDKMKFEYRIEPT 370
Query: 166 SMILGL-----GQNGEVQKARVVFDQMREK-DDATWSGMI---KVYER-KGYELEVIDLF 215
G G+ G +++A + M K +D W ++ KV++ K E+ +LF
Sbjct: 371 MQHYGCMVDLKGRAGLLEEAFQLVQSMPIKANDVLWRSLLSACKVHDNLKLGEIAAENLF 430
Query: 216 TL 217
L
Sbjct: 431 RL 432
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 97/227 (42%), Gaps = 34/227 (14%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDM 62
E +V +++ Y + I + +F +M +K+V SW+ ++ + + LF+
Sbjct: 164 EDDVYVQNSLINMYGKCRDIEMSCAIFRRMEQKSVASWSAIIAAHASLAMWWECLALFED 223
Query: 63 MPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVAR--- 119
M EG +E NV+S T + + + R
Sbjct: 224 MSR--------------------EGCWRAEESILVNVLSACTHLGAF------HLGRCAH 257
Query: 120 -KLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQ 178
L + + E N T+++ Y +CG +Q LF+ M K+ ++ + +I GLG +G +
Sbjct: 258 GSLLKNITELNVAVMTSLMDMYVKCGSLQKGLCLFQNMTRKNQLSYSVIISGLGLHGYGR 317
Query: 179 KARVVFDQMREK----DDATWSGMIKVYERKGYELEVIDLFTLMQKE 221
+A +F +M E+ DD T+ ++ G E +DLF M+ E
Sbjct: 318 QALQIFSEMVEEGLEPDDVTYVSVLSACSHSGLVDEGLDLFDKMKFE 364
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 75/166 (45%), Gaps = 4/166 (2%)
Query: 242 SLDHGRQVHAQLVRCQFDVDVYV-ASVLITMYIK-CGELVKGKLIFDNFASKDIVMWNSI 299
SL+ +QVH Q+++ +D + +SVL T + + IF +N++
Sbjct: 44 SLEEFKQVHVQILKFGLFLDSFCSSSVLATCALSDWNSMDYACSIFQQLDEPTTFDFNTM 103
Query: 300 ISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYL 359
I GY E ++ ++++M V PD+ T VL AC+ ++EG +I + K
Sbjct: 104 IRGYVNNMNFENAIYLYNDMLQREVEPDNFTYPVVLKACARLAVIQEGMQIHGHV-FKLG 162
Query: 360 VEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
+E ++++ G+ +E + + M + W +++ A
Sbjct: 163 LEDDVYVQNSLINMYGKCRDIEMSCAIFRRME-QKSVASWSAIIAA 207
>gi|302785461|ref|XP_002974502.1| hypothetical protein SELMODRAFT_101093 [Selaginella moellendorffii]
gi|300158100|gb|EFJ24724.1| hypothetical protein SELMODRAFT_101093 [Selaginella moellendorffii]
Length = 615
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 208/531 (39%), Positives = 319/531 (60%), Gaps = 9/531 (1%)
Query: 78 YCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEV-SWTAM 136
Y + G + E + +FD M KNV SWT +++G+V + R A +LF M ++ E+ A+
Sbjct: 86 YGKCGSLVEAKRVFDAMQHKNVFSWTMLMAGFVQSGRGVEAIQLFHRMCQEGELPDRVAL 145
Query: 137 LMGYTQCGR---IQDAWELFKAMPM----KSVVASNSMILGLGQNGEVQKARVVFDQMRE 189
L CG + E+ A +V +N++I G+ G + +A VF +M E
Sbjct: 146 LKFIDSCGAAKALSQGREIHSAAASCGMDSDLVTANAIINMYGKCGSIGEAFAVFTRMPE 205
Query: 190 KDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQV 249
K+ +WS MI + + E + F LMQ+EG+ ++ + +SVL S+ +L+ G+ +
Sbjct: 206 KNVISWSTMIAAFCQNELADEALLFFKLMQQEGMELDRITYVSVLDAYTSVGALELGKAL 265
Query: 250 HAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLG 309
H ++V D + V + L+ MY KCG + +FD+ K++V WN++++ Y Q G
Sbjct: 266 HVRIVYAGLDTSIVVGNTLVNMYGKCGSPDDARDVFDSMVEKNVVSWNAMLAAYGQNGRS 325
Query: 310 EKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYAC 369
++L +F M GV P+D+T V +L CS++GK K+ F M+ + + P+ H+ C
Sbjct: 326 REALALFDSMDLEGVRPNDITFVTILYCCSHSGKFKDAVSHFVEMRQDFGITPREVHFGC 385
Query: 370 MVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKN 429
++D+LGR+G++E+A +LI+AMP DA++W SLL AC TH D A AA++ Q EP+
Sbjct: 386 LIDMLGRSGKLEEAEELIQAMPVPADAVLWTSLLCACVTHKDEDRAARAAEEAFQREPRC 445
Query: 430 AGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPE 489
A YI+LSN+YA+ ++ + A++RK M + V K G SWIE++K+VH F D + HP+
Sbjct: 446 AAAYIMLSNLYAALKKWDEAAKVRKRMEQAGVRKQAGRSWIEIDKQVHEFVAGDSI-HPD 504
Query: 490 HPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGV 549
I + L+++ +R GY PD V+H ++EEEK L YHSEKLAVA+G+ P
Sbjct: 505 KSRIFKTLQRLMSEMRIKGYEPDRKVVIHSMEEEEKDEVLFYHSEKLAVAFGIASTPPRT 564
Query: 550 PIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
P+ ++KNLRVC DCHSAIK IS V GR I +RD+NRFHHF G CSC DYW
Sbjct: 565 PLCIVKNLRVCSDCHSAIKFISGVEGRRITVRDSNRFHHFDRGECSCGDYW 615
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 92/325 (28%), Positives = 154/325 (47%), Gaps = 32/325 (9%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRD----SRIDDA 56
M +NV SWT ++ G+V+ G EA LF +M ++ + V L FI +
Sbjct: 102 MQHKNVFSWTMLMAGFVQSGRGVEAIQLFHRMCQEGELPDRVALLKFIDSCGAAKALSQG 161
Query: 57 RRLFDMMP----EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
R + + D+V ++ Y + G + E +F MP+KNVISW+TMI+ + N
Sbjct: 162 REIHSAAASCGMDSDLVTANAIINMYGKCGSIGEAFAVFTRMPEKNVISWSTMIAAFCQN 221
Query: 113 NRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAMPMK--------S 160
D A F++M ++ + +++ ++L YT G A EL KA+ ++ S
Sbjct: 222 ELADEALLFFKLMQQEGMELDRITYVSVLDAYTSVG----ALELGKALHVRIVYAGLDTS 277
Query: 161 VVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQK 220
+V N+++ G+ G AR VFD M EK+ +W+ M+ Y + G E + LF M
Sbjct: 278 IVVGNTLVNMYGKCGSPDDARDVFDSMVEKNVVSWNAMLAAYGQNGRSREALALFDSMDL 337
Query: 221 EGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASV----LITMYIKCG 276
EGVR N + +++L C+ + + V + D + V LI M + G
Sbjct: 338 EGVRPNDITFVTILYCCSHSGKF---KDAVSHFVEMRQDFGITPREVHFGCLIDMLGRSG 394
Query: 277 ELVKG-KLIFDNFASKDIVMWNSII 300
+L + +LI D V+W S++
Sbjct: 395 KLEEAEELIQAMPVPADAVLWTSLL 419
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 151/308 (49%), Gaps = 15/308 (4%)
Query: 164 SNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGV 223
SN ++ G+ G + +A+ VFD M+ K+ +W+ ++ + + G +E I LF M +EG
Sbjct: 79 SNLLVDMYGKCGSLVEAKRVFDAMQHKNVFSWTMLMAGFVQSGRGVEAIQLFHRMCQEGE 138
Query: 224 RVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKL 283
+ +L+ + C + +L GR++H+ C D D+ A+ +I MY KCG + +
Sbjct: 139 LPDRVALLKFIDSCGAAKALSQGREIHSAAASCGMDSDLVTANAIINMYGKCGSIGEAFA 198
Query: 284 IFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGK 343
+F K+++ W+++I+ + Q L +++L F M G+ D +T V VL A + G
Sbjct: 199 VFTRMPEKNVISWSTMIAAFCQNELADEALLFFKLMQQEGMELDRITYVSVLDAYTSVGA 258
Query: 344 VKEG-----REIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAII 398
++ G R ++ + + +V +V++ G+ G +DA + ++M E + +
Sbjct: 259 LELGKALHVRIVYAGLDTSIVVGNT------LVNMYGKCGSPDDARDVFDSM-VEKNVVS 311
Query: 399 WGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIY--ASQGRFHDVAELRKNM 456
W ++L A + + A +A + LE ++ +Y + G+F D M
Sbjct: 312 WNAMLAAYGQNGRSREA-LALFDSMDLEGVRPNDITFVTILYCCSHSGKFKDAVSHFVEM 370
Query: 457 RKRNVIKP 464
R+ I P
Sbjct: 371 RQDFGITP 378
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 100/189 (52%), Gaps = 2/189 (1%)
Query: 217 LMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCG 276
L+++ G L ++ CA +L+ GR++H + D +++++L+ MY KCG
Sbjct: 31 LLEQSGAAGGTGDLEQLIRRCAGAKALEEGRRIHRWMDSGTLDRPRFLSNLLVDMYGKCG 90
Query: 277 ELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLS 336
LV+ K +FD K++ W +++G+ Q G G +++++FH M G +PD V L+ +
Sbjct: 91 SLVEAKRVFDAMQHKNVFSWTMLMAGFVQSGRGVEAIQLFHRMCQEGELPDRVALLKFID 150
Query: 337 ACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDA 396
+C + +GREI + S + A ++++ G+ G + +A + MP E +
Sbjct: 151 SCGAAKALSQGREIHSAAASCGMDSDLVTANA-IINMYGKCGSIGEAFAVFTRMP-EKNV 208
Query: 397 IIWGSLLGA 405
I W +++ A
Sbjct: 209 ISWSTMIAA 217
>gi|449446466|ref|XP_004140992.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Cucumis sativus]
Length = 638
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 211/549 (38%), Positives = 335/549 (61%), Gaps = 19/549 (3%)
Query: 65 EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEV 124
+ D++ ++ Y + G VD R++FDEMP ++++SW TMI N + A L
Sbjct: 96 KTDLLTSNILINMYSKCGSVDFARQVFDEMPSRSLVSWNTMIGSLTQNGEENEALDLLLQ 155
Query: 125 MPEK----NEVSWTAMLMG------YTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQN 174
M + +E + +++L ++C ++ A+ + AM + VA+ +++ +
Sbjct: 156 MQREGTPFSEFTISSVLCACAAKCALSEC-QLLHAFAIKAAMDLNVFVAT-ALLDVYAKC 213
Query: 175 GEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVL 234
G ++ A VF+ M ++ TWS M Y + + + LF + G++ + + SV+
Sbjct: 214 GLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMYEQALALFRKAWETGLKHDQFLMSSVI 273
Query: 235 SVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIV 294
CA LA++ G+Q++A L + F +++VAS LI MY KCG + + +F + +++V
Sbjct: 274 CACAGLAAMIEGKQMNALLSKSGFCSNIFVASSLIDMYAKCGGIEESYKVFRDVEKRNVV 333
Query: 295 MWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESM 354
+WN++ISG +++ + + +F +M G+ P+DVT V VLSAC + G V++G++ F+ M
Sbjct: 334 LWNAMISGLSRHARSLEVMILFEKMQQMGLSPNDVTFVSVLSACGHMGLVRKGQKYFDLM 393
Query: 355 KSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDL 414
++ + P HY+CMVD L RAGQ+ +A LI +PF A +WGSLL +CRTH L+L
Sbjct: 394 TKEHHLAPNVFHYSCMVDTLSRAGQIFEAYDLISKLPFNASASMWGSLLASCRTHGNLEL 453
Query: 415 AEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEK 474
AEVAAKKL +EP N+G Y+LLSN+YA+ G++ +VA++RK +++ +V K G SWIE++
Sbjct: 454 AEVAAKKLFDIEPHNSGNYLLLSNMYAANGKWDEVAKMRKLLKESDVKKERGKSWIEIKD 513
Query: 475 KVHMFTGRDCVSHPEHPMIMRMLEKIGGL---LREAGYCPDSSFVLHDVDEEEKVHSLRY 531
KVH+F V HP I+ + K+ + L++ GY ++ LH V E K LR+
Sbjct: 514 KVHLFM----VGERNHPKIVEIYSKLNEVMDELQKLGYKVETQHDLHQVGESIKQELLRH 569
Query: 532 HSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKD 591
HSEKLA GL+ LP PIR+MKNLR+CGDCHS +KL SK R++I+RD NRFHHFK+
Sbjct: 570 HSEKLAFTMGLLFLPPNAPIRIMKNLRICGDCHSFMKLASKFFCRDVIVRDTNRFHHFKN 629
Query: 592 GLCSCRDYW 600
G CSC D+W
Sbjct: 630 GCCSCGDFW 638
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 78/331 (23%), Positives = 148/331 (44%), Gaps = 30/331 (9%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV----VSWTVMLGGFIRDSRIDDA 56
MP R++VSW M+ + G EA L QM + + + +L + +
Sbjct: 125 MPSRSLVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSEC 184
Query: 57 RRL--FDMMPEKD--VVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+ L F + D V T ++ Y + G + + +F+ MP ++V++W++M +GYV N
Sbjct: 185 QLLHAFAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQN 244
Query: 113 NRIDVARKLFEVMPEKNEVSWTAMLMGYTQC----------GRIQDAWELFKAMPMKSVV 162
+ A LF E + LM C G+ +A L K+ ++
Sbjct: 245 EMYEQALALFRKAWETG-LKHDQFLMSSVICACAGLAAMIEGKQMNAL-LSKSGFCSNIF 302
Query: 163 ASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEG 222
++S+I + G ++++ VF + +++ W+ MI R LEV+ LF MQ+ G
Sbjct: 303 VASSLIDMYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQQMG 362
Query: 223 VRVNFPSLISVLSVCASLASLDHGRQVHAQLVR-CQFDVDVYVASVLITMYIKCGELVKG 281
+ N + +SVLS C + + G++ + + +V+ S ++ + G++ +
Sbjct: 363 LSPNDVTFVSVLSACGHMGLVRKGQKYFDLMTKEHHLAPNVFHYSCMVDTLSRAGQIFEA 422
Query: 282 -----KLIFDNFASKDIVMWNSIISGYAQYG 307
KL F+ AS MW S+++ +G
Sbjct: 423 YDLISKLPFNASAS----MWGSLLASCRTHG 449
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 85/170 (50%), Gaps = 2/170 (1%)
Query: 233 VLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKD 292
+L +CA L G+ HAQ++ D+ +++LI MY KCG + + +FD S+
Sbjct: 70 ILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSRS 129
Query: 293 IVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFE 352
+V WN++I Q G ++L + +M G + T+ VL AC+ + E ++
Sbjct: 130 LVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSEC-QLLH 188
Query: 353 SMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSL 402
+ K ++ ++D+ + G ++DA+ + E+MP + + W S+
Sbjct: 189 AFAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMP-DRSVVTWSSM 237
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 110/231 (47%), Gaps = 17/231 (7%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRD----SRIDDA 56
MP+R+VV+W++M GYV+ M +A LF + E + ++ I + + +
Sbjct: 226 MPDRSVVTWSSMAAGYVQNEMYEQALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEG 285
Query: 57 RRLFDMMPE----KDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+++ ++ + ++ ++++ Y + G ++E ++F ++ K+NV+ W MISG +
Sbjct: 286 KQMNALLSKSGFCSNIFVASSLIDMYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLSRH 345
Query: 113 NRIDVARKLFEVMPE----KNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASN--- 165
R LFE M + N+V++ ++L G ++ + F M + +A N
Sbjct: 346 ARSLEVMILFEKMQQMGLSPNDVTFVSVLSACGHMGLVRKGQKYFDLMTKEHHLAPNVFH 405
Query: 166 --SMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDL 214
M+ L + G++ +A + ++ A+ G + R LE+ ++
Sbjct: 406 YSCMVDTLSRAGQIFEAYDLISKLPFNASASMWGSLLASCRTHGNLELAEV 456
>gi|302800080|ref|XP_002981798.1| hypothetical protein SELMODRAFT_115031 [Selaginella moellendorffii]
gi|300150630|gb|EFJ17280.1| hypothetical protein SELMODRAFT_115031 [Selaginella moellendorffii]
Length = 483
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 195/422 (46%), Positives = 270/422 (63%), Gaps = 1/422 (0%)
Query: 179 KARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCA 238
KA VFD M K W+ MI + ++G LE ++LF M EGVR + + VL VCA
Sbjct: 63 KAIEVFDAMHNKSVVVWTAMIAAHSQQGQGLEALELFKRMDIEGVRADKVAFSLVLDVCA 122
Query: 239 SLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNS 298
+LA+L R +HA + + + D+ V + L+ MY KCG+L + + +F+ ASKD+V W S
Sbjct: 123 NLAALAQARILHATVAGTELEQDMVVKNTLVNMYGKCGKLNEARQVFEKMASKDMVSWTS 182
Query: 299 IISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKY 358
II+ YAQ G + ++FH M +G D V V V+S C++ G +K+ R F SM Y
Sbjct: 183 IIAAYAQQGSASAAFELFHAMQQAGEAIDTVIFVKVMSGCNHAGLLKDARNWFVSMLQDY 242
Query: 359 LVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVA 418
+ P E+YAC++DLLGR GQ++D L+E M EPD I W S L AC+ H + A
Sbjct: 243 GLSPVNENYACILDLLGRLGQLQDVEDLLENMTLEPDFIAWMSFLNACKVHKDMKRGVRA 302
Query: 419 AKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHM 478
A++L+QL +N+ Y+LLS+I+A G+F A+LR+ + + K PG SWIE++ KVH
Sbjct: 303 AQRLVQLNRRNSASYVLLSDIHAVCGKFDAAAKLRRRIGRDCGKKVPGLSWIEIKDKVHK 362
Query: 479 FTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAV 538
F +HP + I L+++G L+REAGY PD+ VL DV+EEEK L YHSEK A+
Sbjct: 363 FASGS-RTHPRNDEIFAELQRLGVLMREAGYVPDTEVVLMDVEEEEKEQVLCYHSEKQAM 421
Query: 539 AYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRD 598
A+GL+ P G P+RV+KNLRVC DCH+A K ISK+ GR+I +RDANRFH FKDG CSC+D
Sbjct: 422 AFGLISTPSGTPLRVVKNLRVCTDCHTATKFISKITGRQITVRDANRFHEFKDGFCSCKD 481
Query: 599 YW 600
YW
Sbjct: 482 YW 483
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 108/213 (50%), Gaps = 18/213 (8%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV----VSWTVMLGGFIRDSRIDDA 56
M ++VV WTAM+ + ++G EA LF +M + V V+++++L + + A
Sbjct: 71 MHNKSVVVWTAMIAAHSQQGQGLEALELFKRMDIEGVRADKVAFSLVLDVCANLAALAQA 130
Query: 57 RRLFDMMP----EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
R L + E+D+V + +V Y + G+++E R++F++M K+++SWT++I+ Y
Sbjct: 131 RILHATVAGTELEQDMVVKNTLVNMYGKCGKLNEARQVFEKMASKDMVSWTSIIAAYAQQ 190
Query: 113 NRIDVARKLFEVMPEKNE----VSWTAMLMGYTQCGRIQDAWELFKAM----PMKSVVAS 164
A +LF M + E V + ++ G G ++DA F +M + V +
Sbjct: 191 GSASAAFELFHAMQQAGEAIDTVIFVKVMSGCNHAGLLKDARNWFVSMLQDYGLSPVNEN 250
Query: 165 NSMILG-LGQNGEVQKARVVFDQMR-EKDDATW 195
+ IL LG+ G++Q + + M E D W
Sbjct: 251 YACILDLLGRLGQLQDVEDLLENMTLEPDFIAW 283
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 95/199 (47%), Gaps = 8/199 (4%)
Query: 58 RLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDV 117
R+ + E D V TN++ Y + D+ E+FD M K+V+ WT MI+ + +
Sbjct: 35 RMITLGCELDTVLGTNLINMYSRCDVPDKAIEVFDAMHNKSVVVWTAMIAAHSQQGQGLE 94
Query: 118 ARKLFEVMP----EKNEVSWTAMLMGYTQCGRIQDAWELFKAMP----MKSVVASNSMIL 169
A +LF+ M ++V+++ +L + A L + + +V N+++
Sbjct: 95 ALELFKRMDIEGVRADKVAFSLVLDVCANLAALAQARILHATVAGTELEQDMVVKNTLVN 154
Query: 170 GLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPS 229
G+ G++ +AR VF++M KD +W+ +I Y ++G +LF MQ+ G ++
Sbjct: 155 MYGKCGKLNEARQVFEKMASKDMVSWTSIIAAYAQQGSASAAFELFHAMQQAGEAIDTVI 214
Query: 230 LISVLSVCASLASLDHGRQ 248
+ V+S C L R
Sbjct: 215 FVKVMSGCNHAGLLKDARN 233
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 108/270 (40%), Gaps = 51/270 (18%)
Query: 34 EKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDE 93
E + V T ++ + R D A +FD M K VV T M+ + Q G+ E E+F
Sbjct: 42 ELDTVLGTNLINMYSRCDVPDKAIEVFDAMHNKSVVVWTAMIAAHSQQGQGLEALELFKR 101
Query: 94 MP---------------------------------------KKNVISWTTMISGYVNNNR 114
M +++++ T+++ Y +
Sbjct: 102 MDIEGVRADKVAFSLVLDVCANLAALAQARILHATVAGTELEQDMVVKNTLVNMYGKCGK 161
Query: 115 IDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMIL----G 170
++ AR++FE M K+ VSWT+++ Y Q G A+ELF AM + + G
Sbjct: 162 LNEARQVFEKMASKDMVSWTSIIAAYAQQGSASAAFELFHAMQQAGEAIDTVIFVKVMSG 221
Query: 171 LGQNGEVQKARVVFDQMREKD-----DATWSGMIKVYERKGYELEVIDLFTLMQKEGVRV 225
G ++ AR F M + + ++ ++ + R G +V DL M E
Sbjct: 222 CNHAGLLKDARNWFVSMLQDYGLSPVNENYACILDLLGRLGQLQDVEDLLENMTLEP--- 278
Query: 226 NFPSLISVLSVCASLASLDHGRQVHAQLVR 255
+F + +S L+ C + G + +LV+
Sbjct: 279 DFIAWMSFLNACKVHKDMKRGVRAAQRLVQ 308
>gi|359494657|ref|XP_002264130.2| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
[Vitis vinifera]
Length = 1724
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 216/651 (33%), Positives = 348/651 (53%), Gaps = 59/651 (9%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF-- 60
+ NV ++ Y E G +A +F M E++++SW M+ +++D + D ++
Sbjct: 1080 DSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAE 1139
Query: 61 -----------------------DMMPEKDVVAQTNMVLG--------------YCQDGR 83
+ + E +V +V G Y + G
Sbjct: 1140 LLQMGKVMNHVTFASALAACSNPECLIESKIVHALIIVAGFHDFLIVGNALVTMYGKLGM 1199
Query: 84 VDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKN-EVSWTAMLMGYTQ 142
+ E +++ MP+ + ++W +I G+ N + A K ++++ EK ++ M+
Sbjct: 1200 MMEAKKVLQTMPQPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVSVLGA 1259
Query: 143 CGRIQDAWELFKAMPMKSVVA----------SNSMILGLGQNGEVQKARVVFDQMREKDD 192
C D L MP+ + + NS+I + G++ + +FD + K
Sbjct: 1260 CSAPDDL--LKHGMPIHAHIVLTGFESDDYVKNSLITMYAKCGDLNSSNYIFDGLGNKSP 1317
Query: 193 ATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQ 252
TW+ M+ G E + +F M+ GV ++ S L+ A+LA L+ G+Q+H
Sbjct: 1318 ITWNAMVAANAHHGCGEEALKIFGEMRNVGVNLDQFSFSGGLAATANLAVLEEGQQLHGL 1377
Query: 253 LVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKS 312
+++ F+ D++V + + MY KCGE+ + ++ + WN +IS +A++G +K+
Sbjct: 1378 VIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQPINRSRLSWNILISAFARHGCFQKA 1437
Query: 313 LKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVD 372
+ FHEM G PD VT V +LSAC++ G V EG ++SM ++ V P EH C++D
Sbjct: 1438 RETFHEMLKLGPKPDHVTFVSLLSACNHGGLVDEGLAYYDSMTREFGVFPGIEHCVCIID 1497
Query: 373 LLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGP 432
LLGR+G++ A I+ MP P+ + W SLL ACR H L+LA A+ LL+L+P +
Sbjct: 1498 LLGRSGRLSHAEGFIKEMPVPPNDLAWRSLLAACRIHGNLELARKTAEHLLELDPSDDSA 1557
Query: 433 YILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPM 492
Y+L SN+ A+ G++ DV LRK M N+ K P CSW++++ KVH F + HP
Sbjct: 1558 YVLYSNVCATSGKWEDVENLRKEMGSNNIKKQPACSWVKLKDKVHSFG----MGEKYHPQ 1613
Query: 493 IMRMLEKIGGLL---REAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGV 549
R+ K+G L+ +EAGY PD+SF LHD+DEE+K ++L HSE+LA+A+GL+ PE
Sbjct: 1614 ASRISAKLGELMKMTKEAGYVPDTSFALHDMDEEQKEYNLWNHSERLALAFGLINTPESS 1673
Query: 550 PIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
+R+ KNLRVCGDCHS K +S ++GR+I+LRD RFHHF G CSC DYW
Sbjct: 1674 TLRIFKNLRVCGDCHSVYKFVSGIVGRKIVLRDPYRFHHFSGGKCSCGDYW 1724
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 160/514 (31%), Positives = 273/514 (53%), Gaps = 48/514 (9%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVV 69
T ++ YV+ G + A +F MPE++VVSWT M+ G+ ++ R + A LF M V
Sbjct: 69 TKLIIFYVKVGDVIAARNVFDGMPERSVVSWTAMVSGYSQNGRFEKAFVLFSDMRHCGVK 128
Query: 70 AQT---NMVLGYCQDGR-VDEGREIFDEMPK----KNVISWTTMISGYVNNNRIDVARKL 121
A L C R +D G ++ + K +N+ + ++ + +++ A L
Sbjct: 129 ANQFTYGSALRACTSLRCLDMGIQVQGCIQKGRFVENLFVKSALVDFHSKCGKMEDASYL 188
Query: 122 FEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVV------------------- 162
F M E++ VSW AM+ GY G D++ +F++M +V
Sbjct: 189 FGTMMERDVVSWNAMIGGYAVQGFADDSFCMFRSMLRGGLVPDCYTLGSVLRASAEGGGL 248
Query: 163 ---------------ASNSMILGL-----GQNGEVQKARVVFDQMREKDDATWSGMIKVY 202
S ++ GL +NG ++ A+ + M +KD + + +I Y
Sbjct: 249 IIANQIHGIITQLGYGSYDIVTGLLINAYAKNGSLRSAKDLRKGMLKKDLFSSTALITGY 308
Query: 203 ERKG-YELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVD 261
+G Y ++ +DLF M + + ++ L S+L++CA+LAS G Q+HA ++ Q D
Sbjct: 309 AHEGIYSVDALDLFKEMNQMNIGMDDVILCSMLNICANLASFALGTQIHAFALKYQPSYD 368
Query: 262 VYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFS 321
V + + LI MY K GE+ K FD K+++ W S+ISGYA++G G ++ ++ +M S
Sbjct: 369 VAMGNALIDMYAKSGEIEDAKRAFDEMEEKNVISWTSLISGYAKHGYGHMAVSLYKKMES 428
Query: 322 SGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVE 381
G P+DVT + +L ACS+TG EG E F +M +KY ++P+ EHY+CMVDL R G +E
Sbjct: 429 KGFKPNDVTFLSLLFACSHTGLTAEGCECFNNMVNKYNIKPRAEHYSCMVDLFARQGLLE 488
Query: 382 DAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYA 441
+A L+ + + +A +WG++LGA + + L + AA L ++P+N+ Y++L++IY+
Sbjct: 489 EAYNLLCKIDIKHNASLWGAILGASSIYGYMSLGKEAASNLFNMQPENSVNYVVLASIYS 548
Query: 442 SQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKK 475
+ G + D ++RK M +R+ K G S+ + KK
Sbjct: 549 AAGLWDDAWKIRKLMEERSTKKNAGYSFFQATKK 582
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 121/436 (27%), Positives = 206/436 (47%), Gaps = 47/436 (10%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVML--GGFIRDSRIDDARR 58
M RN SW+ M+ GYV G+ EA LF QM W + + GF+ S I R
Sbjct: 805 MRHRNEASWSTMLSGYVRVGLYEEAVGLFCQM-------WGLGVEPNGFMVASLITACSR 857
Query: 59 LFDMMPEK--------------DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTT 104
M E DV T +V Y G V +++F+EMP NV+SWT+
Sbjct: 858 SGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTS 917
Query: 105 MISGYVNNNR----IDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPM-- 158
++ GY ++ ++V +++ + N+ ++ + + CG ++D ++ +
Sbjct: 918 LMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVT---SSCGLLEDQVLGYQVLGHII 974
Query: 159 -----KSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVID 213
SV +NS+I V++A VFD M E D +W+ MI Y G E +
Sbjct: 975 QYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLR 1034
Query: 214 LFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYI 273
F M+ N +L S+LSVC+S+ +L GR +H +V+ D +V + + L+T+Y
Sbjct: 1035 CFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYS 1094
Query: 274 KCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVG 333
+ G +L+F +D++ WNS+++ Y Q G LK+ E+ G + + VT
Sbjct: 1095 EAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTFAS 1154
Query: 334 VLSACSYTGKVKEGR----EIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEA 389
L+ACS + E + I + +L+ +V + G+ G + +A K+++
Sbjct: 1155 ALAACSNPECLIESKIVHALIIVAGFHDFLIVGNA-----LVTMYGKLGMMMEAKKVLQT 1209
Query: 390 MPFEPDAIIWGSLLGA 405
MP +PD + W +L+G
Sbjct: 1210 MP-QPDRVTWNALIGG 1224
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 111/418 (26%), Positives = 188/418 (44%), Gaps = 30/418 (7%)
Query: 66 KDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVM 125
D+ T +++ Y + G V R +FD MP+++V+SWT M+SGY N R + A LF M
Sbjct: 63 SDLHLNTKLIIFYVKVGDVIAARNVFDGMPERSVVSWTAMVSGYSQNGRFEKAFVLFSDM 122
Query: 126 P----EKNEVSWTAML----------MGYTQCGRIQDAWELFKAMPMKSVVASNSMILGL 171
+ N+ ++ + L MG G IQ K ++++ ++++
Sbjct: 123 RHCGVKANQFTYGSALRACTSLRCLDMGIQVQGCIQ------KGRFVENLFVKSALVDFH 176
Query: 172 GQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLI 231
+ G+++ A +F M E+D +W+ MI Y +G+ + +F M + G+ + +L
Sbjct: 177 SKCGKMEDASYLFGTMMERDVVSWNAMIGGYAVQGFADDSFCMFRSMLRGGLVPDCYTLG 236
Query: 232 SVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASK 291
SVL A L Q+H + + + V +LI Y K G L K + K
Sbjct: 237 SVLRASAEGGGLIIANQIHGIITQLGYGSYDIVTGLLINAYAKNGSLRSAKDLRKGMLKK 296
Query: 292 DIVMWNSIISGYAQYGL-GEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREI 350
D+ ++I+GYA G+ +L +F EM + DDV L +L+ C+ G +I
Sbjct: 297 DLFSSTALITGYAHEGIYSVDALDLFKEMNQMNIGMDDVILCSMLNICANLASFALGTQI 356
Query: 351 FESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHM 410
+ KY ++D+ ++G++EDA + + M E + I W SL+ H
Sbjct: 357 -HAFALKYQPSYDVAMGNALIDMYAKSGEIEDAKRAFDEME-EKNVISWTSLISGYAKHG 414
Query: 411 KLDLAEVAAKKLLQLEPKNAGP--YILLSNIYASQ--GRFHDVAELRKNMRKRNVIKP 464
+A KK +E K P LS ++A G + E NM + IKP
Sbjct: 415 YGHMAVSLYKK---MESKGFKPNDVTFLSLLFACSHTGLTAEGCECFNNMVNKYNIKP 469
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 106/365 (29%), Positives = 179/365 (49%), Gaps = 19/365 (5%)
Query: 69 VAQTNMVLG-YCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVM-- 125
+ QTN ++ Y + G ++ R +FDEM +N SW+TM+SGYV + A LF M
Sbjct: 779 IFQTNTLINMYSKFGNIEHARYVFDEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWG 838
Query: 126 --PEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKS-----VVASNSMILGLGQNGEVQ 178
E N +++ ++ G + D +K+ V +++ G G V
Sbjct: 839 LGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVY 898
Query: 179 KARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCA 238
A+ +F++M + + +W+ ++ Y G EV++++ M++EGV N + +V S C
Sbjct: 899 NAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCG 958
Query: 239 SLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNS 298
L G QV +++ F+ V VA+ LI+M+ + + +FD+ DI+ WN+
Sbjct: 959 LLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNA 1018
Query: 299 IISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKY 358
+IS YA +GL +SL+ FH M + TL +LS CS +K GR I + K
Sbjct: 1019 MISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGI-HGLVVKL 1077
Query: 359 LVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL------GACRTHMKL 412
++ ++ L AG+ EDA + +AM E D I W S++ G C +K+
Sbjct: 1078 GLDSNVCICNTLLTLYSEAGRSEDAELVFQAMT-ERDLISWNSMMACYVQDGKCLDGLKI 1136
Query: 413 DLAEV 417
LAE+
Sbjct: 1137 -LAEL 1140
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 103/450 (22%), Positives = 193/450 (42%), Gaps = 54/450 (12%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVV 69
TA+V Y G++ A LF +MP+ NVVSWT ++ G+ + ++ M ++ V
Sbjct: 885 TALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVS 944
Query: 70 AQTNM--------------VLGYCQDGR-------------------------VDEGREI 90
N VLGY G V+E +
Sbjct: 945 GNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYV 1004
Query: 91 FDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPE-KNEVSWTAMLMGYTQCGRIQD- 148
FD M + ++ISW MIS Y ++ + + F M NE + T + + C + +
Sbjct: 1005 FDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNL 1064
Query: 149 AWE------LFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVY 202
W + K +V N+++ + G + A +VF M E+D +W+ M+ Y
Sbjct: 1065 KWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACY 1124
Query: 203 ERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDV 262
+ G L+ + + + + G +N + S L+ C++ L + VHA ++ F +
Sbjct: 1125 VQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPECLIESKIVHALIIVAGFHDFL 1184
Query: 263 YVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSS 322
V + L+TMY K G +++ K + D V WN++I G+A+ +++K + +
Sbjct: 1185 IVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPNEAVKAYKLIREK 1244
Query: 323 GVMPDDVTLVGVLSACSYTGK-VKEGREIFESMKSKYLVEPKTEHYA--CMVDLLGRAGQ 379
G+ + +T+V VL ACS +K G I + L +++ Y ++ + + G
Sbjct: 1245 GIPANYITMVSVLGACSAPDDLLKHGMPIHAHI---VLTGFESDDYVKNSLITMYAKCGD 1301
Query: 380 VEDAMKLIEAMPFEPDAIIWGSLLGACRTH 409
+ + + + + I W +++ A H
Sbjct: 1302 LNSSNYIFDGLG-NKSPITWNAMVAANAHH 1330
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 95/190 (50%), Gaps = 4/190 (2%)
Query: 217 LMQKEGVRVNFPSL-ISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKC 275
L+ R++ PSL + +L +C + G +H L+ F D+++ + LI Y+K
Sbjct: 20 LLSSNPTRLD-PSLYLKILQLCIDKKAKKQGHLIHTHLITNGFGSDLHLNTKLIIFYVKV 78
Query: 276 GELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVL 335
G+++ + +FD + +V W +++SGY+Q G EK+ +F +M GV + T L
Sbjct: 79 GDVIAARNVFDGMPERSVVSWTAMVSGYSQNGRFEKAFVLFSDMRHCGVKANQFTYGSAL 138
Query: 336 SACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPD 395
AC+ + G ++ ++ VE A +VD + G++EDA L M E D
Sbjct: 139 RACTSLRCLDMGIQVQGCIQKGRFVENLFVKSA-LVDFHSKCGKMEDASYLFGTM-MERD 196
Query: 396 AIIWGSLLGA 405
+ W +++G
Sbjct: 197 VVSWNAMIGG 206
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 88/179 (49%), Gaps = 6/179 (3%)
Query: 225 VNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLI 284
VNFP L + + S G+ +HA + ++ ++ + LI MY K G + + +
Sbjct: 747 VNFP-----LKGFSEITSQMAGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYV 801
Query: 285 FDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKV 344
FD ++ W++++SGY + GL E+++ +F +M+ GV P+ + +++ACS +G +
Sbjct: 802 FDEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYM 861
Query: 345 KEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
+ K + +V G G V +A KL E MP + + + W SL+
Sbjct: 862 ADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMP-DHNVVSWTSLM 919
>gi|357497455|ref|XP_003619016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494031|gb|AES75234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 999
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 205/543 (37%), Positives = 320/543 (58%), Gaps = 24/543 (4%)
Query: 67 DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMP 126
+V + ++ Y + G++D +IF + + +V+SWT MI+GY +++ A LF+ M
Sbjct: 472 NVYVSSVLIDMYAKHGKLDHALKIFRRLKENDVVSWTAMIAGYTQHDKFTEALNLFKEMQ 531
Query: 127 EKN-EVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQN--------GEV 177
++ + + C IQ A + + + +S ++ S L +G G+V
Sbjct: 532 DQGIKSDNIGFASAISACAGIQ-ALDQGRQIHAQSCLSGYSDDLSIGNALVSLYARCGKV 590
Query: 178 QKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVC 237
++A FDQ+ KD+ +W+ ++ + + GY E +++F M K G+ +N + S +S
Sbjct: 591 REAYAAFDQIYAKDNVSWNSLVSGFAQSGYFEEALNIFAQMNKAGLEINSFTFGSAVSAA 650
Query: 238 ASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWN 297
A++A++ G+Q+H + + +D + V++ LIT+Y KCG + D + WN
Sbjct: 651 ANIANVRIGKQIHGMIRKTGYDSETEVSNALITLYAKCGTI-------------DDISWN 697
Query: 298 SIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSK 357
S+I+GY+Q+G G ++LK+F +M V+P+ VT VGVLSACS+ G V EG F SM
Sbjct: 698 SMITGYSQHGCGFEALKLFEDMKQLDVLPNHVTFVGVLSACSHVGLVDEGISYFRSMSEA 757
Query: 358 YLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEV 417
+ + PK EHYAC+VDLLGR+G + A + +E MP +PDA++W +LL AC H +D+ E
Sbjct: 758 HNLVPKPEHYACVVDLLGRSGLLSRAKRFVEEMPIQPDAMVWRTLLSACNVHKNIDIGEF 817
Query: 418 AAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVH 477
AA LL+LEPK++ Y+L+SN+YA G++ R+ M+ R V K PG SW+EV+ VH
Sbjct: 818 AASHLLELEPKDSATYVLVSNMYAVSGKWDCRDRTRQMMKDRGVKKEPGRSWVEVDNSVH 877
Query: 478 MFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLA 537
F D +HP MI L + E GY P + +L D + +K + HSE+LA
Sbjct: 878 AFFAGD-QNHPRADMIYEYLRGLDFRAAENGYVPRCNSLLSDAEIRQKDPTEIIHSERLA 936
Query: 538 VAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCR 597
+A+GL+ L P+ V KNLRVC DCH+ IK +SK+ R II+RD+ RFHHFK G CSC+
Sbjct: 937 IAFGLLSLTSSTPLYVFKNLRVCEDCHNWIKHVSKITDRVIIVRDSYRFHHFKVGSCSCK 996
Query: 598 DYW 600
DYW
Sbjct: 997 DYW 999
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 110/457 (24%), Positives = 212/457 (46%), Gaps = 57/457 (12%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMM----PE 65
A+V Y G ++ A +F M +++ VS+ ++ G + I+ A LF M +
Sbjct: 290 NALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSLISGLAQQGYINRALALFKKMNLDCQK 349
Query: 66 KDVVAQTNMVLGYCQDGRVDEGREIFDEMPK----KNVISWTTMISGYVNNNRIDVAR-- 119
D V +++ G + G++ K +++ +++ YV + I A
Sbjct: 350 PDCVTVASLLSACASVGALPNGKQFHSYAIKAGMTSDIVVEGSLLDLYVKCSDIKTAHEF 409
Query: 120 -----------KLFEVMPE-------KNEVSWTAML-----MGYTQCGRIQDAWELFKAM 156
K F++ + N+ ++ ++L +G T G Q ++ K
Sbjct: 410 FLCYGQLDNLNKSFQIFTQMQIEGIVPNQFTYPSILKTCTTLGATDLGE-QIHTQVLKTG 468
Query: 157 PMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFT 216
+V S+ +I ++G++ A +F +++E D +W+ MI Y + E ++LF
Sbjct: 469 FQFNVYVSSVLIDMYAKHGKLDHALKIFRRLKENDVVSWTAMIAGYTQHDKFTEALNLFK 528
Query: 217 LMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCG 276
MQ +G++ + S +S CA + +LD GRQ+HAQ + D+ + + L+++Y +CG
Sbjct: 529 EMQDQGIKSDNIGFASAISACAGIQALDQGRQIHAQSCLSGYSDDLSIGNALVSLYARCG 588
Query: 277 ELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLS 336
++ + FD +KD V WNS++SG+AQ G E++L +F +M +G+ + T +S
Sbjct: 589 KVREAYAAFDQIYAKDNVSWNSLVSGFAQSGYFEEALNIFAQMNKAGLEINSFTFGSAVS 648
Query: 337 ACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVED-------------- 382
A + V+ G++I M K + +TE ++ L + G ++D
Sbjct: 649 AAANIANVRIGKQI-HGMIRKTGYDSETEVSNALITLYAKCGTIDDISWNSMITGYSQHG 707
Query: 383 ----AMKLIEAMP---FEPDAIIWGSLLGACRTHMKL 412
A+KL E M P+ + + +L AC +H+ L
Sbjct: 708 CGFEALKLFEDMKQLDVLPNHVTFVGVLSAC-SHVGL 743
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 120/522 (22%), Positives = 221/522 (42%), Gaps = 88/522 (16%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
+ R+ VSW AM+ G + G EA LF Q ++L + + ++L
Sbjct: 225 LKARDSVSWVAMISGLSQNGYEEEAMLLFCQ----------IVLSACTKVEFFEFGKQLH 274
Query: 61 DMMPEKDVVAQT----NMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRID 116
++ ++ ++T +V Y + G + +IF M +++ +S+ ++ISG I+
Sbjct: 275 GLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSLISGLAQQGYIN 334
Query: 117 VARKLFEVM----PEKNEVSWTAMLMGYTQCGRIQDAWEL----FKAMPMKSVVASNSMI 168
A LF+ M + + V+ ++L G + + + KA +V S++
Sbjct: 335 RALALFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQFHSYAIKAGMTSDIVVEGSLL 394
Query: 169 LGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFP 228
+ +++ A F + D+ S +FT MQ EG+ N
Sbjct: 395 DLYVKCSDIKTAHEFFLCYGQLDNLNKS---------------FQIFTQMQIEGIVPNQF 439
Query: 229 SLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNF 288
+ S+L C +L + D G Q+H Q+++ F +VYV+SVLI MY K G+L IF
Sbjct: 440 TYPSILKTCTTLGATDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKHGKLDHALKIFRRL 499
Query: 289 ASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGR 348
D+V W ++I+GY Q+ ++L +F EM G+ D++ +SAC+ + +GR
Sbjct: 500 KENDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQGIKSDNIGFASAISACAGIQALDQGR 559
Query: 349 EIF-ESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACR 407
+I +S S Y + + +V L R G+V +A + + + D + W SL+
Sbjct: 560 QIHAQSCLSGYSDDLSIGN--ALVSLYARCGKVREAYAAFDQI-YAKDNVSWNSLVSG-- 614
Query: 408 THMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGC 467
+A G F + + M K +
Sbjct: 615 --------------------------------FAQSGYFEEALNIFAQMNKAGL------ 636
Query: 468 SWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGY 509
+++ FT VS + +R+ ++I G++R+ GY
Sbjct: 637 -------EINSFTFGSAVSAAANIANVRIGKQIHGMIRKTGY 671
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 105/419 (25%), Positives = 191/419 (45%), Gaps = 54/419 (12%)
Query: 78 YCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKN----EVSW 133
Y G ++ +FDEMP +++ W + + ++ + LF M KN E +
Sbjct: 107 YLAFGDLNCAVNVFDEMPIRSLSCWNRIFNTFIAERLMGRVPGLFRRMLTKNVEFDERIF 166
Query: 134 TAMLMGYTQCGRIQDAWELFKAMPMKSVVAS--------NSMILGLGQNGEVQKARVVFD 185
+L G C ++ + + K++ + N +I +NG + A+ VF+
Sbjct: 167 AVVLRG---CSGNAVSFRFVEQIHAKTITSGFESSTFICNPLIDLYFKNGFLSSAKKVFE 223
Query: 186 QMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDH 245
++ +D +W MI + GYE E + LF + VLS C + +
Sbjct: 224 NLKARDSVSWVAMISGLSQNGYEEEAMLLFCQI--------------VLSACTKVEFFEF 269
Query: 246 GRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQ 305
G+Q+H +++ F + YV + L+T+Y + G L + IF + +D V +NS+ISG AQ
Sbjct: 270 GKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSLISGLAQ 329
Query: 306 YGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGRE-----IFESMKSKYLV 360
G ++L +F +M PD VT+ +LSAC+ G + G++ I M S +V
Sbjct: 330 QGYINRALALFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQFHSYAIKAGMTSDIVV 389
Query: 361 EP------------KTEH--YAC--MVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLG 404
E KT H + C +D L ++ Q+ M+ IE + P+ + S+L
Sbjct: 390 EGSLLDLYVKCSDIKTAHEFFLCYGQLDNLNKSFQIFTQMQ-IEGIV--PNQFTYPSILK 446
Query: 405 ACRTHMKLDLAEVAAKKLLQLEPK-NAGPYILLSNIYASQGRFHDVAELRKNMRKRNVI 462
C T DL E ++L+ + N +L ++YA G+ ++ + +++ +V+
Sbjct: 447 TCTTLGATDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKHGKLDHALKIFRRLKENDVV 505
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 114/261 (43%), Gaps = 27/261 (10%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRD----SRIDDA 56
+ E +VVSWTAM+ GY + TEA LF +M ++ + S + I +D
Sbjct: 499 LKENDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQGIKSDNIGFASAISACAGIQALDQG 558
Query: 57 RRLFDMMP----EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
R++ D+ +V Y + G+V E FD++ K+ +SW +++SG+ +
Sbjct: 559 RQIHAQSCLSGYSDDLSIGNALVSLYARCGKVREAYAAFDQIYAKDNVSWNSLVSGFAQS 618
Query: 113 NRIDVARKLFEVMP----EKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMI 168
+ A +F M E N ++ + + ++ ++ + MI
Sbjct: 619 GYFEEALNIFAQMNKAGLEINSFTFGSAVSAAANIANVRIGKQI------------HGMI 666
Query: 169 LGLGQNGEVQKAR---VVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRV 225
G + E + + ++ + DD +W+ MI Y + G E + LF M++ V
Sbjct: 667 RKTGYDSETEVSNALITLYAKCGTIDDISWNSMITGYSQHGCGFEALKLFEDMKQLDVLP 726
Query: 226 NFPSLISVLSVCASLASLDHG 246
N + + VLS C+ + +D G
Sbjct: 727 NHVTFVGVLSACSHVGLVDEG 747
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 79/197 (40%), Gaps = 26/197 (13%)
Query: 212 IDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITM 271
I LM++ GVR N + + +L C + S G + LI
Sbjct: 66 IGYLHLMEQHGVRANSQTFLWLLEGCLNSRSFYDGLK-------------------LIDF 106
Query: 272 YIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTL 331
Y+ G+L +FD + + WN I + + L + +F M + V D+
Sbjct: 107 YLAFGDLNCAVNVFDEMPIRSLSCWNRIFNTFIAERLMGRVPGLFRRMLTKNVEFDERIF 166
Query: 332 VGVLSACSYTGKVKEGREIFESMKSKYLVEP-KTEHYAC--MVDLLGRAGQVEDAMKLIE 388
VL CS G R + E + +K + ++ + C ++DL + G + A K+ E
Sbjct: 167 AVVLRGCS--GNAVSFRFV-EQIHAKTITSGFESSTFICNPLIDLYFKNGFLSSAKKVFE 223
Query: 389 AMPFEPDAIIWGSLLGA 405
+ D++ W +++
Sbjct: 224 NLK-ARDSVSWVAMISG 239
>gi|414869547|tpg|DAA48104.1| TPA: hypothetical protein ZEAMMB73_530850 [Zea mays]
Length = 1091
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 221/637 (34%), Positives = 342/637 (53%), Gaps = 49/637 (7%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMM----PE 65
A++ Y + MI +A +F +MP ++ +SW ++ G + +A LF M E
Sbjct: 456 NALISFYAKSNMIGDAVLVFNRMPRQDTISWNSVISGCSSNGLNSEAIELFIRMWTQGQE 515
Query: 66 KDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISG----YVNNNRIDVARKL 121
D V +++ Q GR + K +I T++ + Y N + ++
Sbjct: 516 LDSVTLLSVLPACAQSRYWFAGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWQSTNQI 575
Query: 122 FEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKS----VVASNSMILGLG----- 172
F M +KN VSWTAM+ Y + G L + M + V A S +
Sbjct: 576 FRSMGQKNVVSWTAMITSYMRAGLFDKVAGLLQEMVLDGIRPDVFAVTSALHAFAGDESL 635
Query: 173 -----------QNG-------------------EVQKARVVFDQMREKDDATWSGMIKVY 202
+NG V++AR++FD++ KD +W+ +I Y
Sbjct: 636 KQGKSVHGYTIRNGMEKLLPVANALMEMYVKCRNVEEARLIFDRVTNKDVISWNTLIGGY 695
Query: 203 ERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDV 262
R + E LF+ M + R N ++ +L AS++SL+ GR++HA +R F D
Sbjct: 696 SRNNFPNESFSLFSDMLLQ-FRPNAVTMTCILPAAASISSLERGREIHAYALRRGFLEDS 754
Query: 263 YVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSS 322
Y ++ L+ MY+KCG L+ +++FD K+++ W +I+GY +G G+ ++ +F +M S
Sbjct: 755 YASNALVDMYVKCGALLVARVLFDRLTKKNLISWTIMIAGYGMHGFGKHAIALFEQMRGS 814
Query: 323 GVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVED 382
G+ PD + +L AC ++G EGR F++M+ +Y +EPK +HY C+VDLL R G +++
Sbjct: 815 GIEPDAASFSAILYACCHSGLAAEGRRFFKAMQKEYKIEPKLKHYTCIVDLLSRTGDLKE 874
Query: 383 AMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYAS 442
A++ IE+MP EPD+ IW SLL CR H + LAE A K+ +LEP+N G Y+LL+NIYA
Sbjct: 875 ALEFIESMPIEPDSSIWVSLLHGCRIHKNVKLAEKVADKVFKLEPENTGYYVLLANIYAE 934
Query: 443 QGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGG 502
R+ V +L+ + R + + G SWIEV KVH+F D +HP+ I L+ +
Sbjct: 935 AERWEAVKKLKNKIGGRGLRENTGYSWIEVRSKVHVFIA-DNRNHPDWNRIAEFLDDVAR 993
Query: 503 LLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGD 562
+R+ G+ P + L D+ +L HS KLAVA+G++ LPEG PIRV KN +VC
Sbjct: 994 RMRQEGHDPKKKYALMGADDAVHDEALCGHSSKLAVAFGVLNLPEGRPIRVTKNSKVCSH 1053
Query: 563 CHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDY 599
CH A K ISK+ REIILRD++RFH F+ G CSCR Y
Sbjct: 1054 CHEAAKFISKMCNREIILRDSSRFHRFEGGRCSCRGY 1090
Score = 132 bits (331), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 99/373 (26%), Positives = 175/373 (46%), Gaps = 39/373 (10%)
Query: 66 KDVVAQTNMVLGYCQDGRVDEGREIFDEMPKK--NVISWTTMISGYVNNNRIDVARKLFE 123
K V +VL Y + G + E R +FD MP + +V WT+++S Y A LF
Sbjct: 134 KGSVLGKRLVLAYLKCGDLGEARTVFDGMPPQAADVRVWTSLMSAYAKAGDFQEAVSLFR 193
Query: 124 VM------PEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMK-----SVVASNSMILGLG 172
M P+ + VS +L + G + + E+ + K + +N++I
Sbjct: 194 QMQCCGVSPDAHAVS--CVLKCVSSLGSLTEG-EVIHGLLEKLGLGQACAVANALIAVYS 250
Query: 173 QNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLIS 232
+ G ++ A VFD M +D +W+ MI G+ +DLF+ M +G ++ +++S
Sbjct: 251 RCGRMEDAARVFDSMHPRDAISWNSMIGGCFSNGWHGTAVDLFSKMWSQGTEISSVTVLS 310
Query: 233 VLSVCASLASLDHGRQVHAQLVRC---------QFDV-DVYVASVLITMYIKCGELVKGK 282
VL CA L G+ VH V+ Q + D + S L+ MY+KCG++ +
Sbjct: 311 VLPACAGLGYGLIGKAVHGYSVKSGLLWGLDSVQSGIDDAALGSKLVFMYVKCGDMASAR 370
Query: 283 LIFDNFASK-DIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLS----- 336
+FD +SK ++ +WN I+ GYA+ G E+SL +F +M G+ PD+ + +L
Sbjct: 371 RVFDAMSSKGNVHVWNLIMGGYAKVGEFEESLSLFVQMHELGIAPDEHAISCLLKCITCL 430
Query: 337 ACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDA 396
+C+ G V G + ++ V ++ ++ + DA+ + MP + D
Sbjct: 431 SCARDGLVAHGYIVKLGFGAQCAV------CNALISFYAKSNMIGDAVLVFNRMPRQ-DT 483
Query: 397 IIWGSLLGACRTH 409
I W S++ C ++
Sbjct: 484 ISWNSVISGCSSN 496
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 97/387 (25%), Positives = 171/387 (44%), Gaps = 40/387 (10%)
Query: 1 MPER--NVVSWTAMVRGYVEEGMITEAGTLFWQM------PEKNVVSWTV----MLGGFI 48
MP + +V WT+++ Y + G EA +LF QM P+ + VS + LG
Sbjct: 162 MPPQAADVRVWTSLMSAYAKAGDFQEAVSLFRQMQCCGVSPDAHAVSCVLKCVSSLGSLT 221
Query: 49 RDSRIDDARRLFDMMPEKDVVAQTNMVLG-YCQDGRVDEGREIFDEMPKKNVISWTTMIS 107
I L + + A N ++ Y + GR+++ +FD M ++ ISW +MI
Sbjct: 222 EGEVIHG---LLEKLGLGQACAVANALIAVYSRCGRMEDAARVFDSMHPRDAISWNSMIG 278
Query: 108 GYVNNNRIDVARKLFEVM-PEKNEVSWTAML--------MGYTQCGRIQDAWELFKAM-- 156
G +N A LF M + E+S +L +GY G+ + + +
Sbjct: 279 GCFSNGWHGTAVDLFSKMWSQGTEISSVTVLSVLPACAGLGYGLIGKAVHGYSVKSGLLW 338
Query: 157 -------PMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDA-TWSGMIKVYERKGYE 208
+ + ++ + G++ AR VFD M K + W+ ++ Y + G
Sbjct: 339 GLDSVQSGIDDAALGSKLVFMYVKCGDMASARRVFDAMSSKGNVHVWNLIMGGYAKVGEF 398
Query: 209 LEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVL 268
E + LF M + G+ + ++ +L L+ G H +V+ F V + L
Sbjct: 399 EESLSLFVQMHELGIAPDEHAISCLLKCITCLSCARDGLVAHGYIVKLGFGAQCAVCNAL 458
Query: 269 ITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDD 328
I+ Y K + L+F+ +D + WNS+ISG + GL +++++F M++ G D
Sbjct: 459 ISFYAKSNMIGDAVLVFNRMPRQDTISWNSVISGCSSNGLNSEAIELFIRMWTQGQELDS 518
Query: 329 VTLVGVLSACS-----YTGKVKEGREI 350
VTL+ VL AC+ + G+V G +
Sbjct: 519 VTLLSVLPACAQSRYWFAGRVVHGYSV 545
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 109/462 (23%), Positives = 193/462 (41%), Gaps = 42/462 (9%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKN--VVSWTVM--------LG-GFIR 49
M R+ +SW +M+ G G A LF +M + + S TV+ LG G I
Sbjct: 265 MHPRDAISWNSMIGGCFSNGWHGTAVDLFSKMWSQGTEISSVTVLSVLPACAGLGYGLIG 324
Query: 50 DS------------RIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKK 97
+ +D + D D + +V Y + G + R +FD M K
Sbjct: 325 KAVHGYSVKSGLLWGLDSVQSGID-----DAALGSKLVFMYVKCGDMASARRVFDAMSSK 379
Query: 98 -NVISWTTMISGYVNNNRIDVARKLFEVM------PEKNEVSWTAMLMGYTQCGR---IQ 147
NV W ++ GY + + LF M P+++ +S + C R +
Sbjct: 380 GNVHVWNLIMGGYAKVGEFEESLSLFVQMHELGIAPDEHAISCLLKCITCLSCARDGLVA 439
Query: 148 DAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGY 207
+ + + V N++I ++ + A +VF++M +D +W+ +I G
Sbjct: 440 HGYIVKLGFGAQCAVC-NALISFYAKSNMIGDAVLVFNRMPRQDTISWNSVISGCSSNGL 498
Query: 208 ELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASV 267
E I+LF M +G ++ +L+SVL CA GR VH V+ + +A+
Sbjct: 499 NSEAIELFIRMWTQGQELDSVTLLSVLPACAQSRYWFAGRVVHGYSVKTGLIGETSLANA 558
Query: 268 LITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPD 327
L+ MY C + IF + K++V W ++I+ Y + GL +K + EM G+ PD
Sbjct: 559 LLDMYSNCSDWQSTNQIFRSMGQKNVVSWTAMITSYMRAGLFDKVAGLLQEMVLDGIRPD 618
Query: 328 DVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLI 387
+ L A + +K+G+ + + +E ++++ + VE+A +LI
Sbjct: 619 VFAVTSALHAFAGDESLKQGKSV-HGYTIRNGMEKLLPVANALMEMYVKCRNVEEA-RLI 676
Query: 388 EAMPFEPDAIIWGSLLGA-CRTHMKLDLAEVAAKKLLQLEPK 428
D I W +L+G R + + + + LLQ P
Sbjct: 677 FDRVTNKDVISWNTLIGGYSRNNFPNESFSLFSDMLLQFRPN 718
>gi|147771387|emb|CAN76239.1| hypothetical protein VITISV_016538 [Vitis vinifera]
Length = 503
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 208/504 (41%), Positives = 310/504 (61%), Gaps = 9/504 (1%)
Query: 105 MISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQ---CGRIQDAWELFKAMPMKSV 161
M+ GY+ N A +LF ++ + E S L + C + D + A +K+
Sbjct: 1 MMFGYIIGNDGKKALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAG 60
Query: 162 VAS----NSMILGLG-QNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFT 216
S NS IL + + G++ A +VF+ + DD W+ MI G E + + ++
Sbjct: 61 FDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYH 120
Query: 217 LMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCG 276
M++ V + + +++ + + +L+ GRQ+HA +++ D +V + L+ MY KCG
Sbjct: 121 RMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCG 180
Query: 277 ELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLS 336
+ +F ++I +WN+++ G AQ+G E+++ +F M S G+ PD V+ +G+LS
Sbjct: 181 NIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILS 240
Query: 337 ACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDA 396
ACS+ G E E SM + Y +EP+ EHY+C+VD LGRAG V++A K+IE MPF+ A
Sbjct: 241 ACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASA 300
Query: 397 IIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNM 456
I +LLGACR ++ + A +L LEP ++ Y+LLSNIYA+ R+ DV + RK M
Sbjct: 301 SINRALLGACRIQGDVEXGKRVAARLFALEPFDSAAYVLLSNIYAAANRWDDVTDARKMM 360
Query: 457 RKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFV 516
+++NV K PG SWI+V+ +H+F D SHP+ +I +E++ +RE GY PD+ FV
Sbjct: 361 KRKNVKKDPGFSWIDVKNMLHLFVVDD-RSHPQADIIYDKVEEMMKTIREDGYVPDTEFV 419
Query: 517 LHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGR 576
L DV++EEK SL YHSEKLA+AYGL+ P IRV+KNLRVCGDCH+AIK ISKV R
Sbjct: 420 LLDVEDEEKERSLYYHSEKLAIAYGLISTPASTTIRVIKNLRVCGDCHNAIKYISKVFER 479
Query: 577 EIILRDANRFHHFKDGLCSCRDYW 600
EI+LRDANRFHHF+DG+CSC DYW
Sbjct: 480 EIVLRDANRFHHFRDGVCSCGDYW 503
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 95/205 (46%), Gaps = 17/205 (8%)
Query: 7 VSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSR----IDDARRLFDM 62
V+WT+M+ G V+ G +A ++ +M + V+ I+ S ++ R+L
Sbjct: 97 VAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHAN 156
Query: 63 MPEKDVVAQ----TNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVA 118
+ + D V+ T++V Y + G +++ +F +M +N+ W M+ G + + A
Sbjct: 157 VIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEA 216
Query: 119 RKLFEVMP----EKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMK-----SVVASNSMIL 169
LF+ M E + VS+ +L + G +A+E +MP + + ++
Sbjct: 217 VNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVD 276
Query: 170 GLGQNGEVQKARVVFDQMREKDDAT 194
LG+ G VQ+A V + M K A+
Sbjct: 277 ALGRAGLVQEADKVIETMPFKASAS 301
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 114/268 (42%), Gaps = 23/268 (8%)
Query: 16 YVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQ---- 71
Y++ G + AG +F + + V+WT M+ G + + D A R++ M + V+
Sbjct: 75 YIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTF 134
Query: 72 TNMVLGYCQDGRVDEGREIFDEMPKKNVIS----WTTMISGYVNNNRIDVARKLFEVMPE 127
++ +++GR++ + K + +S T+++ Y I+ A +LF+ M
Sbjct: 135 ATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNV 194
Query: 128 KNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGL----GQNGEVQKARVV 183
+N W AML+G Q G ++A LFK+M + +G+ G +A
Sbjct: 195 RNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYEY 254
Query: 184 FDQMR-----EKDDATWSGMIKVYERKGYELEVIDLFTLMQ-KEGVRVNFPSLISVLSVC 237
M E + +S ++ R G E + M K +N ++L C
Sbjct: 255 LHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASINR----ALLGAC 310
Query: 238 ASLASLDHGRQVHAQLVRCQ-FDVDVYV 264
++ G++V A+L + FD YV
Sbjct: 311 RIQGDVEXGKRVAARLFALEPFDSAAYV 338
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 87/200 (43%), Gaps = 43/200 (21%)
Query: 65 EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFE- 123
+ D+ + ++ Y + G + +F+ + + ++WT+MISG V+N D A +++
Sbjct: 62 DSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHR 121
Query: 124 -----VMPE--------KNEVSWTAMLMG-------------------------YTQCGR 145
VMP+ K TA+ G Y +CG
Sbjct: 122 MRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGN 181
Query: 146 IQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMR----EKDDATWSGMIKV 201
I+DA+ LFK M ++++ N+M++GL Q+G ++A +F M+ E D ++ G++
Sbjct: 182 IEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSA 241
Query: 202 YERKGYELEVIDLFTLMQKE 221
G E + M +
Sbjct: 242 CSHAGLTSEAYEYLHSMPND 261
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 89/223 (39%), Gaps = 34/223 (15%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMP----E 65
T++V Y + G I +A LF +M +N+ W ML G + ++A LF M E
Sbjct: 170 TSLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIE 229
Query: 66 KDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVM 125
D V+ ++ G E E MP + +
Sbjct: 230 PDRVSFIGILSACSHAGLTSEAYEYLHSMPND------------------------YGIE 265
Query: 126 PEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQ-NGEVQKARVVF 184
PE S +G + G +Q+A ++ + MP K+ + N +LG + G+V+ + V
Sbjct: 266 PEIEHYSCLVDALG--RAGLVQEADKVIETMPFKASASINRALLGACRIQGDVEXGKRVA 323
Query: 185 DQ---MREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVR 224
+ + D A + + +Y +V D +M+++ V+
Sbjct: 324 ARLFALEPFDSAAYVLLSNIYAAANRWDDVTDARKMMKRKNVK 366
>gi|356543252|ref|XP_003540076.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 934
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 212/619 (34%), Positives = 344/619 (55%), Gaps = 25/619 (4%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEK----NVVSWTVMLGGFIRDSRIDDA 56
M ER+++SW +M+ +V+ G A L +M + N V++T L +
Sbjct: 322 MRERDLISWNSMMASHVDNGNYPRALELLIEMLQTRKATNYVTFTTALSACYNLETLKIV 381
Query: 57 RRLFDMMP-EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRI 115
++ +++ +V Y + G + + + MP ++ ++W +I G+ +N
Sbjct: 382 HAFVILLGLHHNLIIGNALVTMYGKFGSMAAAQRVCKIMPDRDEVTWNALIGGHADNKEP 441
Query: 116 DVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKS--VVA------ 163
+ A + F ++ E+ N ++ +L + + D MP+ + VVA
Sbjct: 442 NAAIEAFNLLREEGVPVNYITIVNLLSAFLSPDDLLD-----HGMPIHAHIVVAGFELET 496
Query: 164 --SNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKE 221
+S+I Q G++ + +FD + K+ +TW+ ++ G E + L M+ +
Sbjct: 497 FVQSSLITMYAQCGDLNTSNYIFDVLANKNSSTWNAILSANAHYGPGEEALKLIIKMRND 556
Query: 222 GVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKG 281
G+ ++ S ++ +L LD G+Q+H+ +++ F+ + YV + + MY KCGE+
Sbjct: 557 GIHLDQFSFSVAHAIIGNLTLLDEGQQLHSLIIKHGFESNDYVLNATMDMYGKCGEIDDV 616
Query: 282 KLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYT 341
I S+ WN +IS A++G +++ + FHEM G+ PD VT V +LSACS+
Sbjct: 617 FRILPQPRSRSQRSWNILISALARHGFFQQAREAFHEMLDLGLRPDHVTFVSLLSACSHG 676
Query: 342 GKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGS 401
G V EG F SM +K+ V EH C++DLLGRAG++ +A I MP P ++W S
Sbjct: 677 GLVDEGLAYFSSMSTKFGVPTGIEHCVCIIDLLGRAGKLTEAENFINKMPVPPTDLVWRS 736
Query: 402 LLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNV 461
LL AC+ H L+LA AA +L +L+ + Y+L SN+ AS R+ DV +RK M N+
Sbjct: 737 LLAACKIHGNLELARKAADRLFELDSSDDSAYVLYSNVCASTRRWRDVENVRKQMESHNI 796
Query: 462 IKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVD 521
K P CSW++++ +V F D HP++ I LE++ ++REAGY PD+S+ L D D
Sbjct: 797 KKKPACSWVKLKNQVTTFGMGD-QYHPQNAEIYAKLEELKKIIREAGYMPDTSYSLQDTD 855
Query: 522 EEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILR 581
EE+K H+L HSE++A+A+GL+ EG P+R+ KNLRVCGDCHS K++S+++GR+IILR
Sbjct: 856 EEQKEHNLWNHSERIALAFGLINSSEGSPLRIFKNLRVCGDCHSVFKMVSQIIGRKIILR 915
Query: 582 DANRFHHFKDGLCSCRDYW 600
DA RFHHF G CSC DYW
Sbjct: 916 DAYRFHHFSSGKCSCSDYW 934
Score = 141 bits (356), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 115/466 (24%), Positives = 213/466 (45%), Gaps = 38/466 (8%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV-----VSWTVMLG----GFIRDS 51
MPERN SW ++ G+V G +A F M E V V+ +++ G + +
Sbjct: 18 MPERNEASWNNLMSGFVRVGWYQKAMQFFCHMLEHGVRPSSYVAASLVTACDRSGCMTEG 77
Query: 52 RIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVN 111
+ DV T+++ Y G V E +F E+ + N++SWT+++ GY
Sbjct: 78 AFQVHAHVIKCGLACDVFVGTSLLHFYGTFGWVAEVDMVFKEIEEPNIVSWTSLMVGYAY 137
Query: 112 NNRI----DVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAW-------ELFKAMPMKS 160
N + V R+L NE AM CG + D + K+ +
Sbjct: 138 NGCVKEVMSVYRRLRRDGVYCNE---NAMATVIRSCGVLVDKMLGYQVLGSVIKSGLDTT 194
Query: 161 VVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQK 220
V +NS+I G +++A VFD M+E+D +W+ +I G+ + ++ F+ M+
Sbjct: 195 VSVANSLISMFGNCDSIEEASCVFDDMKERDTISWNSIITASVHNGHCEKSLEYFSQMRY 254
Query: 221 EGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVK 280
+ ++ ++ ++L VC S +L GR +H +V+ + +V V + L++MY + G+
Sbjct: 255 THAKTDYITISALLPVCGSAQNLRWGRGLHGMVVKSGLESNVCVCNSLLSMYSQAGKSED 314
Query: 281 GKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSY 340
+ +F +D++ WNS+++ + G ++L++ EM + + VT LSAC
Sbjct: 315 AEFVFHKMRERDLISWNSMMASHVDNGNYPRALELLIEMLQTRKATNYVTFTTALSACYN 374
Query: 341 --TGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAII 398
T K+ I + ++ +V + G+ G + A ++ + MP + D +
Sbjct: 375 LETLKIVHAFVILLGLHHNLIIGNA------LVTMYGKFGSMAAAQRVCKIMP-DRDEVT 427
Query: 399 WGSLLGACRTHMKLDLAEVAAKKLLQLE--PKNAGPYILLSNIYAS 442
W +L+G K A + A LL+ E P N YI + N+ ++
Sbjct: 428 WNALIGG-HADNKEPNAAIEAFNLLREEGVPVN---YITIVNLLSA 469
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/338 (26%), Positives = 157/338 (46%), Gaps = 13/338 (3%)
Query: 78 YCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKN--EVSWTA 135
Y + G ++ + +FD+MP++N SW ++SG+V A + F M E S+ A
Sbjct: 2 YSKFGSIEHAQHVFDKMPERNEASWNNLMSGFVRVGWYQKAMQFFCHMLEHGVRPSSYVA 61
Query: 136 MLMGYTQC--------GRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQM 187
+ T C G Q + K V S++ G G V + +VF ++
Sbjct: 62 ASL-VTACDRSGCMTEGAFQVHAHVIKCGLACDVFVGTSLLHFYGTFGWVAEVDMVFKEI 120
Query: 188 REKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGR 247
E + +W+ ++ Y G EV+ ++ ++++GV N ++ +V+ C L G
Sbjct: 121 EEPNIVSWTSLMVGYAYNGCVKEVMSVYRRLRRDGVYCNENAMATVIRSCGVLVDKMLGY 180
Query: 248 QVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYG 307
QV +++ D V VA+ LI+M+ C + + +FD+ +D + WNSII+ G
Sbjct: 181 QVLGSVIKSGLDTTVSVANSLISMFGNCDSIEEASCVFDDMKERDTISWNSIITASVHNG 240
Query: 308 LGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHY 367
EKSL+ F +M + D +T+ +L C ++ GR + M K +E
Sbjct: 241 HCEKSLEYFSQMRYTHAKTDYITISALLPVCGSAQNLRWGRGL-HGMVVKSGLESNVCVC 299
Query: 368 ACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
++ + +AG+ EDA + M E D I W S++ +
Sbjct: 300 NSLLSMYSQAGKSEDAEFVFHKMR-ERDLISWNSMMAS 336
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 61/139 (43%), Gaps = 13/139 (9%)
Query: 271 MYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVT 330
MY K G + + +FD ++ WN+++SG+ + G +K+++ F M GV P
Sbjct: 1 MYSKFGSIEHAQHVFDKMPERNEASWNNLMSGFVRVGWYQKAMQFFCHMLEHGVRPSSYV 60
Query: 331 LVGVLSACSYTGKVKEG------REIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAM 384
+++AC +G + EG I + V H+ G +V+
Sbjct: 61 AASLVTACDRSGCMTEGAFQVHAHVIKCGLACDVFVGTSLLHF---YGTFGWVAEVDMVF 117
Query: 385 KLIEAMPFEPDAIIWGSLL 403
K IE EP+ + W SL+
Sbjct: 118 KEIE----EPNIVSWTSLM 132
>gi|242035229|ref|XP_002465009.1| hypothetical protein SORBIDRAFT_01g030410 [Sorghum bicolor]
gi|241918863|gb|EER92007.1| hypothetical protein SORBIDRAFT_01g030410 [Sorghum bicolor]
Length = 684
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 216/611 (35%), Positives = 350/611 (57%), Gaps = 19/611 (3%)
Query: 6 VVSWTAMVRGYVEEGMITEAGTLFWQMPEK---NVVSWTVMLGGFIRDSRIDDAR----R 58
+ +W A++ G A +F +P + ++T+ L R +D A R
Sbjct: 77 IPAWNALLAARSRAGSPGAALRVFRALPSSARPDSTTFTLALTACARLGDLDAAEAVRVR 136
Query: 59 LFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVA 118
F +DV + ++ Y + G + + +FD MP+K+ ++W+TM++G+V+ R A
Sbjct: 137 AFAAGYGRDVFVCSALLHVYSRCGAMGDAIRVFDGMPRKDHVAWSTMVAGFVSAGRPVEA 196
Query: 119 RKLFEVMPE----KNEVSWTAM-----LMGYTQCGRIQDAWELFKAMPMKSVVASNSMIL 169
++ M E ++EV + L G T+ G L M M V+A+ S++
Sbjct: 197 LGMYSRMREHGVAEDEVVMVGVIQACTLTGNTRMGASVHGRFLRHGMRMDVVIAT-SLVD 255
Query: 170 GLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPS 229
+NG AR VF M ++ +W+ +I + + G+ E +DLF M G++ + +
Sbjct: 256 MYAKNGHFDVARQVFRMMPYRNAVSWNALISGFAQNGHADEALDLFREMSTSGLQPDSGA 315
Query: 230 LISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFA 289
L+S L CA + L G+ +H ++R + + + + ++ MY KCG L + +F+ +
Sbjct: 316 LVSALLACADVGFLKLGKSIHGFILR-RLEFQCILGTAVLDMYSKCGSLESARKLFNKLS 374
Query: 290 SKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGRE 349
S+D+V+WN++I+ +G G +L +F E+ +G+ PD T +LSA S++G V+EG+
Sbjct: 375 SRDLVLWNAMIACCGTHGCGHDALALFQELNETGIKPDHATFASLLSALSHSGLVEEGKF 434
Query: 350 IFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTH 409
F+ M +++ +EP +H C+VDLL R+G VE+A +++ +M EP IW +LL C +
Sbjct: 435 WFDRMITEFGIEPTEKHCVCVVDLLARSGLVEEANEMLASMHTEPTIPIWVALLSGCLNN 494
Query: 410 MKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSW 469
KL+L E AKK+L+ +P++ G L+SN+YA+ ++ V E+RK M+ K PG S
Sbjct: 495 KKLELGETIAKKILESQPEDIGVLALVSNLYAAAKKWDKVREIRKLMKDSGSKKVPGYSL 554
Query: 470 IEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSL 529
IEV H F D SHP+H I++M+ K+ +R+ GY P + FV HD+DE+ K L
Sbjct: 555 IEVHGTRHAFVMED-QSHPQHQEILKMISKLSFEMRKMGYVPRTEFVYHDLDEDVKEQLL 613
Query: 530 RYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHF 589
YHSE+LA+A+GL+ G + ++KNLRVCGDCH AIK ISK++ REI++RDA RFHHF
Sbjct: 614 SYHSERLAIAFGLLNTSPGTRLVIIKNLRVCGDCHDAIKYISKIVDREIVVRDAKRFHHF 673
Query: 590 KDGLCSCRDYW 600
KDG CSC DYW
Sbjct: 674 KDGACSCGDYW 684
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 104/460 (22%), Positives = 193/460 (41%), Gaps = 86/460 (18%)
Query: 4 RNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMM 63
R+V +A++ Y G + +A +F MP K+ V+W+ M+ GF+ R +A ++ M
Sbjct: 144 RDVFVCSALLHVYSRCGAMGDAIRVFDGMPRKDHVAWSTMVAGFVSAGRPVEALGMYSRM 203
Query: 64 PEKDV---------VAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNR 114
E V V Q + G + G GR + M + +V+ T+++ Y N
Sbjct: 204 REHGVAEDEVVMVGVIQACTLTGNTRMGASVHGRFLRHGM-RMDVVIATSLVDMYAKNGH 262
Query: 115 IDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMI------ 168
DVAR++F +MP +N VSW A++ G+ Q G +A +LF+ M + + +
Sbjct: 263 FDVARQVFRMMPYRNAVSWNALISGFAQNGHADEALDLFREMSTSGLQPDSGALVSALLA 322
Query: 169 ------LGLGQN--------------------------GEVQKARVVFDQMREKDDATWS 196
L LG++ G ++ AR +F+++ +D W+
Sbjct: 323 CADVGFLKLGKSIHGFILRRLEFQCILGTAVLDMYSKCGSLESARKLFNKLSSRDLVLWN 382
Query: 197 GMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLV-- 254
MI G + + LF + + G++ + + S+LS + ++ G+ +++
Sbjct: 383 AMIACCGTHGCGHDALALFQELNETGIKPDHATFASLLSALSHSGLVEEGKFWFDRMITE 442
Query: 255 --------RCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISG---Y 303
C VD+ S L+ +++ I +W +++SG
Sbjct: 443 FGIEPTEKHCVCVVDLLARSGLVEE--------ANEMLASMHTEPTIPIWVALLSGCLNN 494
Query: 304 AQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLS----ACSYTGKVKEGREIFESMKSK-- 357
+ LGE K E P+D+ ++ ++S A KV+E R++ + SK
Sbjct: 495 KKLELGETIAKKILES-----QPEDIGVLALVSNLYAAAKKWDKVREIRKLMKDSGSKKV 549
Query: 358 ---YLVEPK-TEHYACMVDLLGRAGQVEDAMKLIEAMPFE 393
L+E T H M D Q ++ +K+I + FE
Sbjct: 550 PGYSLIEVHGTRHAFVMED--QSHPQHQEILKMISKLSFE 587
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 117/286 (40%), Gaps = 47/286 (16%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MP RN VSW A++ G+ + G EA LF +M +
Sbjct: 273 MPYRNAVSWNALISGFAQNGHADEALDLFREMSTSGL----------------------- 309
Query: 61 DMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKK---NVISWTTMISGYVNNNRIDV 117
+ D A + +L G + G+ I + ++ I T ++ Y ++
Sbjct: 310 ----QPDSGALVSALLACADVGFLKLGKSIHGFILRRLEFQCILGTAVLDMYSKCGSLES 365
Query: 118 ARKLFEVMPEKNEVSWTAMLM--GYTQCGRIQDAWELFKAMPMKSVVASN----SMILGL 171
ARKLF + ++ V W AM+ G CG DA LF+ + + + S++ L
Sbjct: 366 ARKLFNKLSSRDLVLWNAMIACCGTHGCG--HDALALFQELNETGIKPDHATFASLLSAL 423
Query: 172 GQNGEVQKARVVFDQM-----REKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVN 226
+G V++ + FD+M E + ++ + R G E ++ M E
Sbjct: 424 SHSGLVEEGKFWFDRMITEFGIEPTEKHCVCVVDLLARSGLVEEANEMLASMHTEP---T 480
Query: 227 FPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMY 272
P +++LS C + L+ G + +++ Q + D+ V +++ +Y
Sbjct: 481 IPIWVALLSGCLNNKKLELGETIAKKILESQPE-DIGVLALVSNLY 525
>gi|357167019|ref|XP_003580964.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Brachypodium distachyon]
Length = 861
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 228/673 (33%), Positives = 360/673 (53%), Gaps = 77/673 (11%)
Query: 4 RNVVSWTAMVRGYVEEGMITEAGTLFWQMPEK--NVVSWTVMLGGFIRDSRIDDARR-LF 60
R + A++ Y G++ +A LF+ ++V+W M+ ++ R ++A + L+
Sbjct: 190 RERFPFNALLSMYARLGLVDDAQRLFFSSGAGVGDLVTWNTMISLLVQGGRCEEAVQVLY 249
Query: 61 DMMP---EKDVVAQTNMVLGYCQDGRVDEGREIF-----DEMPKKNVISWTTMISGYVNN 112
DM+ D V + + + + GRE+ D+ N + ++ Y +N
Sbjct: 250 DMVALGVRPDGVTFASALPACSRLELLGVGREVHAFVLKDDDLAANSFVASALVDMYASN 309
Query: 113 NRIDVARKLFEVMPEKNEV--SWTAMLMGYTQCGRI-QDAWELFKAM-------PMKSVV 162
++ AR++F+++PE W AM+ GY Q G + ++A ELF M P ++ +
Sbjct: 310 EQVSHARRVFDMVPEHGRQLGMWNAMICGYAQHGGMDEEAIELFSRMEAEAGCAPSETTM 369
Query: 163 AS---------------------------------NSMILGLGQNGEVQKARVVFDQMRE 189
A N+++ + G + +A +F +
Sbjct: 370 AGVLPACARSEVFTGKEAVHGYVVKRDMASNRFVQNALMDMYARLGRMDEAHTIFAMIDL 429
Query: 190 KDDATWSGMIKVYERKGYELEVIDLFTLMQK------------------EGVRV--NFPS 229
+D +W+ +I +G E L MQ +G R N +
Sbjct: 430 RDIVSWNTLITGCIVQGLISEAFQLVREMQLPSSAASGETMLEGDDTSVDGQRCMPNNIT 489
Query: 230 LISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFA 289
L+++L CA LA+ G+++H VR + D+ V S L+ MY KCG L + +FD
Sbjct: 490 LMTLLPGCAVLAAPARGKEIHGYAVRHALESDLAVGSALVDMYAKCGCLALARAVFDRLP 549
Query: 290 SKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSG-VMPDDVTLVGVLSACSYTGKVKEGR 348
++++ WN +I Y +GLG+++L +F M ++G P++VT + L+ACS++G V G
Sbjct: 550 RRNVITWNVLIMAYGMHGLGDEALALFDRMVANGEATPNEVTFIAALAACSHSGLVDRGL 609
Query: 349 EIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAM-PFEPDAIIWGSLLGACR 407
E+F+ MK Y EP +AC+VD+LGRAG++++A +I +M P E W ++LGACR
Sbjct: 610 ELFQGMKRDYGFEPTPYLHACVVDVLGRAGRLDEAYGIISSMAPGEHQVSAWSTMLGACR 669
Query: 408 THMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGC 467
H + L +AA++L +LEP A Y+LL NIY++ G + + E+R MR+R V K PGC
Sbjct: 670 LHRNVKLGRIAAERLFELEPDEASHYVLLCNIYSAAGLWENSTEVRGMMRQRGVAKEPGC 729
Query: 468 SWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVH 527
SWIE++ +H F + +HPE + ++ + +R GY PD+S VLHDVDE EK
Sbjct: 730 SWIELDGAIHRFMAGES-AHPESAQVHAHMDALWERMRREGYVPDTSCVLHDVDEAEKAA 788
Query: 528 SLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFH 587
LRYHSEKLA+A+GL++ P G IRV KNLRVC DCH A K IS+++GREI+LRD RFH
Sbjct: 789 MLRYHSEKLAIAFGLLRAPPGATIRVAKNLRVCNDCHEAAKFISRMVGREIVLRDVRRFH 848
Query: 588 HFKDGLCSCRDYW 600
HF+DG CSC DYW
Sbjct: 849 HFRDGTCSCGDYW 861
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 117/238 (49%), Gaps = 21/238 (8%)
Query: 190 KDDATWSGMIK---VYERKGYELEVI-DLFTLMQKEGVRVNFPSLISVLSVCASLASLDH 245
+D +++ +I ++ R G+ L+ + D+ + V+ +L+SVL C+ LA H
Sbjct: 116 RDAVSYNSLISALCLFRRWGHALDALRDMLADHE-----VSSFTLVSVLLACSHLADQGH 170
Query: 246 --GRQVHAQLVRCQF---DVDVYVASVLITMYIKCGELVKGKLIFDNFASK----DIVMW 296
GR+ HA ++ F + + + L++MY + G + + +F F+S D+V W
Sbjct: 171 RLGREAHAFALKHGFLDKGRERFPFNALLSMYARLGLVDDAQRLF--FSSGAGVGDLVTW 228
Query: 297 NSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKS 356
N++IS Q G E++++V ++M + GV PD VT L ACS + GRE+ +
Sbjct: 229 NTMISLLVQGGRCEEAVQVLYDMVALGVRPDGVTFASALPACSRLELLGVGREVHAFVLK 288
Query: 357 KYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAI-IWGSLLGACRTHMKLD 413
+ + + +VD+ QV A ++ + +P + +W +++ H +D
Sbjct: 289 DDDLAANSFVASALVDMYASNEQVSHARRVFDMVPEHGRQLGMWNAMICGYAQHGGMD 346
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 77/180 (42%), Gaps = 21/180 (11%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM-----PEKNVVSWTVMLGGFIRDSRIDD 55
+P RNV++W ++ Y G+ EA LF +M N V++ L +D
Sbjct: 548 LPRRNVITWNVLIMAYGMHGLGDEALALFDRMVANGEATPNEVTFIAALAACSHSGLVDR 607
Query: 56 ARRLFDMMPEKDVVAQTNMVLGYC------QDGRVDEGREIFDEMP--KKNVISWTTMIS 107
LF M ++D + L C + GR+DE I M + V +W+TM+
Sbjct: 608 GLELFQGM-KRDYGFEPTPYLHACVVDVLGRAGRLDEAYGIISSMAPGEHQVSAWSTMLG 666
Query: 108 GYVNNNRIDVAR----KLFEVMPEKNEVSWTAMLMG-YTQCGRIQDAWELFKAMPMKSVV 162
+ + + R +LFE+ P +E S +L Y+ G +++ E+ M + V
Sbjct: 667 ACRLHRNVKLGRIAAERLFELEP--DEASHYVLLCNIYSAAGLWENSTEVRGMMRQRGVA 724
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 65/147 (44%), Gaps = 12/147 (8%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDM 62
E ++ +A+V Y + G + A +F ++P +NV++W V++ + D+A LFD
Sbjct: 519 ESDLAVGSALVDMYAKCGCLALARAVFDRLPRRNVITWNVLIMAYGMHGLGDEALALFDR 578
Query: 63 MPEKDVVAQTNMV----LGYC-QDGRVDEGREIFDEMPKKNVISWTTMISGYV-----NN 112
M + L C G VD G E+F M + T + V
Sbjct: 579 MVANGEATPNEVTFIAALAACSHSGLVDRGLELFQGMKRDYGFEPTPYLHACVVDVLGRA 638
Query: 113 NRIDVARKLFEVM-PEKNEVS-WTAML 137
R+D A + M P +++VS W+ ML
Sbjct: 639 GRLDEAYGIISSMAPGEHQVSAWSTML 665
>gi|297745783|emb|CBI15839.3| unnamed protein product [Vitis vinifera]
Length = 505
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 209/488 (42%), Positives = 292/488 (59%), Gaps = 17/488 (3%)
Query: 123 EVMPEKNEVSW---TAMLMGYTQCGRIQDAWELFKAMPMK-----SVVASNSMILGLGQN 174
+V+P K S + + G Q G E F MK ++ ++ ++
Sbjct: 25 DVLPSKTSFSLILRSCAISGEAQLG------EAFHCQIMKMGFEYDMILQTGLLDFYAKH 78
Query: 175 GEVQKARVVFDQMREKDD--ATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLIS 232
G V++AR +FD M E++ TW+ MI Y + G I +F MQ E V+ +++S
Sbjct: 79 GYVEEARNLFDNMTERNSNSVTWNTMISAYVQCGEFGTAISMFQQMQSENVKPTEVTMVS 138
Query: 233 VLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKD 292
+LS CA L +LD G +H + + +DV + + LI MY KCG L +F + K+
Sbjct: 139 LLSACAHLGALDMGEWIHGYIRTKRLKIDVVLGNALIDMYCKCGALEAAIDVFHGLSRKN 198
Query: 293 IVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFE 352
I WNSII G G GE+++ F M G+ PD VT VG+LS CS++G + G+ F
Sbjct: 199 IFCWNSIIVGLGMNGRGEEAIAAFIVMEKEGIKPDGVTFVGILSGCSHSGLLSAGQRYFS 258
Query: 353 SMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKL 412
M Y +EP EHY CMVDLLGRAG +++A++LI AMP +P++++ GSLL AC+ H
Sbjct: 259 EMLGVYGLEPGVEHYGCMVDLLGRAGYLKEALELIRAMPMKPNSMVLGSLLRACQIHKDT 318
Query: 413 DLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEV 472
L E ++LL+L+P + G Y+ LSN+YAS R+ DV RK M KR V K PGCS IEV
Sbjct: 319 KLGEQVTQQLLELDPCDGGNYVFLSNLYASLSRWDDVNTCRKLMIKRGVHKTPGCSSIEV 378
Query: 473 EKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYH 532
VH F D SHP+ I L++I L+ G+ P+++ VLHD++EEEK ++RYH
Sbjct: 379 NNIVHEFVAGD-TSHPQFTQINAFLDEIAKELKGQGHVPNTANVLHDIEEEEKEGAIRYH 437
Query: 533 SEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDG 592
SE++AVA+GL+ P G IRV+KNLR C DCHSA+KLIS REII+RD RFHHF++G
Sbjct: 438 SERIAVAFGLMSTPPGKTIRVVKNLRTCSDCHSAMKLISNAFKREIIVRDRKRFHHFRNG 497
Query: 593 LCSCRDYW 600
CSC DYW
Sbjct: 498 SCSCNDYW 505
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 102/208 (49%), Gaps = 4/208 (1%)
Query: 198 MIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQ 257
MI+V G + + ++ M + V + S +L CA G H Q+++
Sbjct: 1 MIRVSLESGVCPDFLGFYSGMLRNDVLPSKTSFSLILRSCAISGEAQLGEAFHCQIMKMG 60
Query: 258 FDVDVYVASVLITMYIKCGELVKGKLIFDNFASK--DIVMWNSIISGYAQYGLGEKSLKV 315
F+ D+ + + L+ Y K G + + + +FDN + + V WN++IS Y Q G ++ +
Sbjct: 61 FEYDMILQTGLLDFYAKHGYVEEARNLFDNMTERNSNSVTWNTMISAYVQCGEFGTAISM 120
Query: 316 FHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLG 375
F +M S V P +VT+V +LSAC++ G + G I +++K L A ++D+
Sbjct: 121 FQQMQSENVKPTEVTMVSLLSACAHLGALDMGEWIHGYIRTKRLKIDVVLGNA-LIDMYC 179
Query: 376 RAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
+ G +E A+ + + + W S++
Sbjct: 180 KCGALEAAIDVFHGLS-RKNIFCWNSII 206
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 116/261 (44%), Gaps = 18/261 (6%)
Query: 12 MVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRL--------FDMM 63
M+R +E G+ + + M +V+ +R I +L M
Sbjct: 1 MIRVSLESGVCPDFLGFYSGMLRNDVLPSKTSFSLILRSCAISGEAQLGEAFHCQIMKMG 60
Query: 64 PEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKK--NVISWTTMISGYVNNNRIDVARKL 121
E D++ QT ++ Y + G V+E R +FD M ++ N ++W TMIS YV A +
Sbjct: 61 FEYDMILQTGLLDFYAKHGYVEEARNLFDNMTERNSNSVTWNTMISAYVQCGEFGTAISM 120
Query: 122 FEVMPEKN----EVSWTAMLMGYTQCGRIQDAWELFKAMPMK----SVVASNSMILGLGQ 173
F+ M +N EV+ ++L G + + + K VV N++I +
Sbjct: 121 FQQMQSENVKPTEVTMVSLLSACAHLGALDMGEWIHGYIRTKRLKIDVVLGNALIDMYCK 180
Query: 174 NGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISV 233
G ++ A VF + K+ W+ +I G E I F +M+KEG++ + + + +
Sbjct: 181 CGALEAAIDVFHGLSRKNIFCWNSIIVGLGMNGRGEEAIAAFIVMEKEGIKPDGVTFVGI 240
Query: 234 LSVCASLASLDHGRQVHAQLV 254
LS C+ L G++ ++++
Sbjct: 241 LSGCSHSGLLSAGQRYFSEML 261
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 92/220 (41%), Gaps = 54/220 (24%)
Query: 1 MPERNV--VSWTAMVRGYVEEGMITEAGTLFWQMPEKNV----VSWTVMLGGFIRDSRID 54
M ERN V+W M+ YV+ G A ++F QM +NV V+ +L +D
Sbjct: 91 MTERNSNSVTWNTMISAYVQCGEFGTAISMFQQMQSENVKPTEVTMVSLLSACAHLGALD 150
Query: 55 DARRLFDMMPEK----DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYV 110
+ + K DVV ++ YC+ G ++ ++F + +KN+ W ++I G
Sbjct: 151 MGEWIHGYIRTKRLKIDVVLGNALIDMYCKCGALEAAIDVFHGLSRKNIFCWNSIIVGLG 210
Query: 111 NNNRIDVARKLFEVMPEK----NEVSWTAMLMGYT------------------------- 141
N R + A F VM ++ + V++ +L G +
Sbjct: 211 MNGRGEEAIAAFIVMEKEGIKPDGVTFVGILSGCSHSGLLSAGQRYFSEMLGVYGLEPGV 270
Query: 142 -----------QCGRIQDAWELFKAMPMKSVVASNSMILG 170
+ G +++A EL +AMPMK NSM+LG
Sbjct: 271 EHYGCMVDLLGRAGYLKEALELIRAMPMK----PNSMVLG 306
>gi|224080790|ref|XP_002306231.1| predicted protein [Populus trichocarpa]
gi|222849195|gb|EEE86742.1| predicted protein [Populus trichocarpa]
Length = 480
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 201/473 (42%), Positives = 297/473 (62%), Gaps = 2/473 (0%)
Query: 129 NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMR 188
N+ +++ +L + + K +KS +++ + G V +A VF ++
Sbjct: 9 NDFTYSTILTAQPGVSPFEMHAQAIKRNYVKSPSVGTALLDAYVKRGNVDEASKVFQRIE 68
Query: 189 EKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCAS-LASLDHGR 247
EKD WS MI Y + G + +F M KE ++ N + +++ CA+ A ++ G+
Sbjct: 69 EKDIVAWSAMICGYAQIGDTEGAVRIFVQMAKEKIKPNEYTFSGIINACAAPTAGVEQGK 128
Query: 248 QVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYG 307
Q+HA ++ +F+ + V+S L+TMY K G++ +F +D+V WNSIISGYAQ+G
Sbjct: 129 QLHAWSIKSRFNNALCVSSALLTMYSKRGDIESAFEVFKRQRERDLVSWNSIISGYAQHG 188
Query: 308 LGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHY 367
G K+L+VF EM + D VT +GV+SAC++TG EG+ F+ M + +EP+ EHY
Sbjct: 189 YGRKALEVFEEMQRQNLEMDGVTFIGVISACTHTGLANEGQRYFDIMVKDHHIEPRMEHY 248
Query: 368 ACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEP 427
+CMVDL GRAG + AM++I MPF A +W +LL A H L++ ++AA KL+ L+P
Sbjct: 249 SCMVDLYGRAGMLVKAMEIINEMPFPASANVWRTLLAASCIHRNLEVGKLAADKLISLQP 308
Query: 428 KNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSH 487
+N Y+LL+N+YAS G + + A++RK M ++ V K G SWIEV+ K + F D VSH
Sbjct: 309 QNPASYVLLTNMYASVGNWKERAKVRKLMEEKKVKKVAGYSWIEVKNKTYTFLAGD-VSH 367
Query: 488 PEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPE 547
P I LE++ L+ AGY PD+S+V DVDEE K L HSE+LA+A+GL+ P
Sbjct: 368 PLSNQIYAKLEELSCQLKGAGYQPDTSYVFQDVDEEHKEAILSQHSERLAIAFGLIGTPP 427
Query: 548 GVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
G P++++KNLRVCGDCHS IKLIS + GR+I++RD+NRFHHFK GLCSC DYW
Sbjct: 428 GTPLQIVKNLRVCGDCHSVIKLISILEGRDIVVRDSNRFHHFKGGLCSCGDYW 480
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 127/266 (47%), Gaps = 28/266 (10%)
Query: 41 TVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVI 100
T +L +++ +D+A ++F + EKD+VA + M+ GY Q G + IF +M K+ +
Sbjct: 45 TALLDAYVKRGNVDEASKVFQRIEEKDIVAWSAMICGYAQIGDTEGAVRIFVQMAKEKIK 104
Query: 101 SWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKS 160
SG +N + A G Q G+ AW + K+ +
Sbjct: 105 PNEYTFSGIIN--------------------ACAAPTAGVEQ-GKQLHAWSI-KSRFNNA 142
Query: 161 VVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQK 220
+ S++++ + G+++ A VF + RE+D +W+ +I Y + GY + +++F MQ+
Sbjct: 143 LCVSSALLTMYSKRGDIESAFEVFKRQRERDLVSWNSIISGYAQHGYGRKALEVFEEMQR 202
Query: 221 EGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVR-CQFDVDVYVASVLITMYIKCGELV 279
+ + ++ + I V+S C + G++ +V+ + + S ++ +Y + G LV
Sbjct: 203 QNLEMDGVTFIGVISACTHTGLANEGQRYFDIMVKDHHIEPRMEHYSCMVDLYGRAGMLV 262
Query: 280 KGKLIFDNF---ASKDIVMWNSIISG 302
K I + AS ++ W ++++
Sbjct: 263 KAMEIINEMPFPASANV--WRTLLAA 286
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 108/227 (47%), Gaps = 18/227 (7%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVV 69
TA++ YV+ G + EA +F ++ EK++V+W+ M+ G+ + + A R+F M ++ +
Sbjct: 45 TALLDAYVKRGNVDEASKVFQRIEEKDIVAWSAMICGYAQIGDTEGAVRIFVQMAKEKIK 104
Query: 70 AQTNMVLGYCQ-----DGRVDEGREIFDEMPK---KNVISWTT-MISGYVNNNRIDVARK 120
G V++G+++ K N + ++ +++ Y I+ A +
Sbjct: 105 PNEYTFSGIINACAAPTAGVEQGKQLHAWSIKSRFNNALCVSSALLTMYSKRGDIESAFE 164
Query: 121 LFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSV---------VASNSMILGL 171
+F+ E++ VSW +++ GY Q G + A E+F+ M +++ V S GL
Sbjct: 165 VFKRQRERDLVSWNSIISGYAQHGYGRKALEVFEEMQRQNLEMDGVTFIGVISACTHTGL 224
Query: 172 GQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLM 218
G+ +V D E +S M+ +Y R G ++ +++ M
Sbjct: 225 ANEGQRYFDIMVKDHHIEPRMEHYSCMVDLYGRAGMLVKAMEIINEM 271
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 54/275 (19%), Positives = 120/275 (43%), Gaps = 53/275 (19%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPE---------------------------K 35
E+++V+W+AM+ GY + G A +F QM + K
Sbjct: 69 EKDIVAWSAMICGYAQIGDTEGAVRIFVQMAKEKIKPNEYTFSGIINACAAPTAGVEQGK 128
Query: 36 NVVSWTV-------------MLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDG 82
+ +W++ +L + + I+ A +F E+D+V+ +++ GY Q G
Sbjct: 129 QLHAWSIKSRFNNALCVSSALLTMYSKRGDIESAFEVFKRQRERDLVSWNSIISGYAQHG 188
Query: 83 RVDEGREIFDEMPKKNV----ISWTTMISGYVNNNRIDVARKLFEVMPEKNEVS-----W 133
+ E+F+EM ++N+ +++ +IS + + ++ F++M + + + +
Sbjct: 189 YGRKALEVFEEMQRQNLEMDGVTFIGVISACTHTGLANEGQRYFDIMVKDHHIEPRMEHY 248
Query: 134 TAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILG---LGQNGEVQK-ARVVFDQMRE 189
+ M+ Y + G + A E+ MP + +L + +N EV K A ++
Sbjct: 249 SCMVDLYGRAGMLVKAMEIINEMPFPASANVWRTLLAASCIHRNLEVGKLAADKLISLQP 308
Query: 190 KDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVR 224
++ A++ + +Y G E + LM+++ V+
Sbjct: 309 QNPASYVLLTNMYASVGNWKERAKVRKLMEEKKVK 343
>gi|357484833|ref|XP_003612704.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355514039|gb|AES95662.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 572
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 215/551 (39%), Positives = 337/551 (61%), Gaps = 14/551 (2%)
Query: 59 LFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVA 118
FD ++VA + + G +D IF ++ + + + TMI G VN+ +++ A
Sbjct: 27 FFDTFCMSNLVATCALT----KWGSMDYACSIFTQIDEPSSFDYNTMIRGNVNDMKLEEA 82
Query: 119 RKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWEL----FKAMPMKSVVASNSMILG 170
L+ M E+ ++ ++ +L + G + + ++ FK V+ NS+I
Sbjct: 83 LLLYVDMIERGVEPDKFTYPFVLKACSLLGVVDEGIQVHGHVFKMGLEGDVIVQNSLINM 142
Query: 171 LGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEG-VRVNFPS 229
G+ GE++ A VF+ M EK A+WS +I + E + L M EG RV +
Sbjct: 143 YGKCGEIKNACDVFNGMDEKSVASWSAIIGAHACVEMWNECLMLLGKMSSEGRCRVEEST 202
Query: 230 LISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFA 289
L++VLS C L S D G+ +H L+R +++V V + LI MY+K G L KG +F N +
Sbjct: 203 LVNVLSACTHLGSPDLGKCIHGILLRNISELNVVVKTSLIDMYVKSGCLEKGLRVFKNMS 262
Query: 290 SKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGRE 349
K+ + +ISG A +G G+++LKVF EM G+ PDDV VGV SACS+ G V+EG +
Sbjct: 263 EKNRYSYTVMISGLAIHGRGKEALKVFSEMIEEGLAPDDVVYVGVFSACSHAGLVEEGLQ 322
Query: 350 IFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTH 409
F+SM+ ++ +EP +HY CMVDLLGR G +++A +LI++M +P+ +IW SLL AC+ H
Sbjct: 323 CFKSMQFEHKIEPTVQHYGCMVDLLGRFGMLKEAYELIKSMSIKPNDVIWRSLLSACKVH 382
Query: 410 MKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSW 469
L++ ++AA+ L L N+G Y++L+N+YA ++ DVA++R + +RN+++ PG S
Sbjct: 383 HNLEIGKIAAENLFMLNQNNSGDYLVLANMYAKAQKWDDVAKIRTKLAERNLVQTPGFSL 442
Query: 470 IEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSL 529
IE ++KV+ F +D S P+ +I M+ ++ L+ GY PD+S VL DVD+EEK L
Sbjct: 443 IEAKRKVYKFVSQD-KSIPQWNIIYEMIHQMEWQLKFEGYIPDTSQVLLDVDDEEKKERL 501
Query: 530 RYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHF 589
++HS+KLA+A+GL+ EG P+R+ +NLR+C DCH+ K IS + REI +RD RFHHF
Sbjct: 502 KFHSQKLAIAFGLIHTSEGSPLRITRNLRMCSDCHTYTKYISMIYEREITVRDRLRFHHF 561
Query: 590 KDGLCSCRDYW 600
K+G CSC+DYW
Sbjct: 562 KNGSCSCKDYW 572
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 78/406 (19%), Positives = 165/406 (40%), Gaps = 58/406 (14%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV----------VSWTVMLGGFIRD 50
+ E + + M+RG V + + EA L+ M E+ V + +LG + D
Sbjct: 58 IDEPSSFDYNTMIRGNVNDMKLEEALLLYVDMIERGVEPDKFTYPFVLKACSLLG--VVD 115
Query: 51 SRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYV 110
I +F M E DV+ Q +++ Y + G + ++F+ M +K+V SW+ +I +
Sbjct: 116 EGIQVHGHVFKMGLEGDVIVQNSLINMYGKCGEIKNACDVFNGMDEKSVASWSAIIGAHA 175
Query: 111 -----NNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMK-----S 160
N + + + E E + +L T G D + + ++ +
Sbjct: 176 CVEMWNECLMLLGKMSSEGRCRVEESTLVNVLSACTHLGS-PDLGKCIHGILLRNISELN 234
Query: 161 VVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQK 220
VV S+I ++G ++K VF M EK+ +++ MI G E + +F+ M +
Sbjct: 235 VVVKTSLIDMYVKSGCLEKGLRVFKNMSEKNRYSYTVMISGLAIHGRGKEALKVFSEMIE 294
Query: 221 EGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVK 280
EG+ + + V S C+ ++ G Q +
Sbjct: 295 EGLAPDDVVYVGVFSACSHAGLVEEGLQCFKSMQ-------------------------- 328
Query: 281 GKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSY 340
F++ + + ++ ++G+ +++ ++ M + P+DV +LSAC
Sbjct: 329 ----FEHKIEPTVQHYGCMVDLLGRFGMLKEAYELIKSM---SIKPNDVIWRSLLSACKV 381
Query: 341 TGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKL 386
++ G+ E++ L + + Y + ++ +A + +D K+
Sbjct: 382 HHNLEIGKIAAENL--FMLNQNNSGDYLVLANMYAKAQKWDDVAKI 425
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 74/161 (45%), Gaps = 4/161 (2%)
Query: 247 RQVHAQLVRCQFDVDVYVASVLITM--YIKCGELVKGKLIFDNFASKDIVMWNSIISGYA 304
+QVHA +++C D + S L+ K G + IF +N++I G
Sbjct: 15 KQVHAHVLKCGIFFDTFCMSNLVATCALTKWGSMDYACSIFTQIDEPSSFDYNTMIRGNV 74
Query: 305 QYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKT 364
E++L ++ +M GV PD T VL ACS G V EG ++ + K +E
Sbjct: 75 NDMKLEEALLLYVDMIERGVEPDKFTYPFVLKACSLLGVVDEGIQVHGHV-FKMGLEGDV 133
Query: 365 EHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
++++ G+ G++++A + M E W +++GA
Sbjct: 134 IVQNSLINMYGKCGEIKNACDVFNGMD-EKSVASWSAIIGA 173
>gi|147832325|emb|CAN66581.1| hypothetical protein VITISV_030261 [Vitis vinifera]
Length = 622
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 222/597 (37%), Positives = 341/597 (57%), Gaps = 46/597 (7%)
Query: 49 RDSRIDDARRLFDMMPEKDVVAQ---TNMVLGYC---QDGRVDEGREIFDEMPKKNVISW 102
R S +++ R++ M + ++ + +L +C G + R +FD + + N W
Sbjct: 27 RCSNMEELRQIHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYARTVFDRIFRPNTFMW 86
Query: 103 TTMISGYVNNNRIDVARKLFEVM-------------------------PEKNEVSWTAML 137
TMI GY N+ + A L+ M E ++ +
Sbjct: 87 NTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSASEETQQIHAHIIK 146
Query: 138 MG--------------YTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVV 183
MG Y++ G I+ A LF + + V+ NSMI G + GE++ A +
Sbjct: 147 MGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMIDGYTKCGEIEMAYEI 206
Query: 184 FDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASL 243
F+ M E++ +W+ MI G E ++LF MQ G++++ +L+S L CA L L
Sbjct: 207 FNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQACADLGVL 266
Query: 244 DHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGY 303
D G+ +HA + + + ++D + VLI MY KCG+L + +F K + +W ++ISGY
Sbjct: 267 DQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSVWTAMISGY 326
Query: 304 AQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPK 363
A +G G ++L+ F +M ++GV P+ +T G+L+ACS+ G V E + +FESM+ + +P
Sbjct: 327 AIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEAKLLFESMERIHGFKPS 386
Query: 364 TEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLL 423
EHY CMVDLLGRAG +++A +LIE MP +P+A IWG+LL AC H L+L + K L+
Sbjct: 387 IEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGALLNACHIHGNLELGKQIGKILI 446
Query: 424 QLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRD 483
Q++P + G YI L++I+A+ G ++ A +R+ M+++ V K PGCS I V H F D
Sbjct: 447 QVDPGHGGRYIHLASIHAAAGEWNQAARVRRQMKEQGVSKLPGCSVISVNGTAHEFLAGD 506
Query: 484 CVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLV 543
SHP+ I MLE+I LRE GY P +L D++++EK ++ +HSEKLAV +GL+
Sbjct: 507 -ESHPQIKEIDHMLEQIVERLREEGYKPKLGDLLLDLEDKEKETAIHHHSEKLAVTFGLI 565
Query: 544 KLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
G+ IR++KNLRVC DCH+ IKLISKV REI++RD RFH FKDG C+C DYW
Sbjct: 566 STKPGMTIRIVKNLRVCEDCHTVIKLISKVYAREILMRDRTRFHLFKDGNCTCGDYW 622
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/365 (21%), Positives = 154/365 (42%), Gaps = 54/365 (14%)
Query: 5 NVVSWTAMVRGYV-----EEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRL 59
N W M+RGY EE ++ L+ +P N ++ +L S ++ +++
Sbjct: 82 NTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPH-NAYTFPFLLKACSSMSASEETQQI 140
Query: 60 FDM---MPEKDVVAQTNMVLG-YCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRI 115
M + TN +L Y + G + R +FD++ +++ +SW +MI GY I
Sbjct: 141 HAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMIDGYTKCGEI 200
Query: 116 DVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQN- 174
++A ++F MPE+N +SWT+M+ G G+ ++A LF M + N ++ Q
Sbjct: 201 EMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQAC 260
Query: 175 --------------------------------------GEVQKARVVFDQMREKDDATWS 196
G++++A VF +M EK + W+
Sbjct: 261 ADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSVWT 320
Query: 197 GMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRC 256
MI Y G E ++ F MQ GV N + +L+ C+ + + + + R
Sbjct: 321 AMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEAKLLFESMERI 380
Query: 257 Q-FDVDVYVASVLITMYIKCGELVKGKLIFDNFASK-DIVMWNSIISGYAQYG---LGEK 311
F + ++ + + G L + + + +N K + +W ++++ +G LG++
Sbjct: 381 HGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGALLNACHIHGNLELGKQ 440
Query: 312 SLKVF 316
K+
Sbjct: 441 IGKIL 445
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 123/270 (45%), Gaps = 20/270 (7%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDM 62
+R+ VSW +M+ GY + G I A +F MPE+N++SWT M+ G + + +A LF
Sbjct: 181 QRDTVSWNSMIDGYTKCGEIEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHR 240
Query: 63 MPEK----DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNV----ISWTTMISGYVNNNR 114
M D VA + + G +D+G+ I + K + I +I Y
Sbjct: 241 MQTAGIKLDNVALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGD 300
Query: 115 IDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGL--- 171
++ A ++F M EK WTAM+ GY GR ++A E F M V + G+
Sbjct: 301 LEEAIEVFRKMEEKGVSVWTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTA 360
Query: 172 -GQNGEVQKARVVFDQMR-----EKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRV 225
G V +A+++F+ M + + M+ + R G E +L M V+
Sbjct: 361 CSHAGLVHEAKLLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMP---VKP 417
Query: 226 NFPSLISVLSVCASLASLDHGRQVHAQLVR 255
N ++L+ C +L+ G+Q+ L++
Sbjct: 418 NAAIWGALLNACHIHGNLELGKQIGKILIQ 447
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 107/226 (47%), Gaps = 22/226 (9%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV----VSWTVMLGGFIRDSRIDDA 56
MPERN++SWT+M+ G V G EA LF +M + V+ L +D
Sbjct: 210 MPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQACADLGVLDQG 269
Query: 57 RRLFDMMPEKDVVAQTNMVLG------YCQDGRVDEGREIFDEMPKKNVISWTTMISGYV 110
+ + + + ++ + + +LG Y + G ++E E+F +M +K V WT MISGY
Sbjct: 270 KWIHAYIKKHEI--EIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSVWTAMISGYA 327
Query: 111 NNNRIDVARKLFEVMP----EKNEVSWTAMLMGYTQCGRIQDAWELFKAMP-----MKSV 161
+ R A + F M E N++++T +L + G + +A LF++M S+
Sbjct: 328 IHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEAKLLFESMERIHGFKPSI 387
Query: 162 VASNSMILGLGQNGEVQKARVVFDQMREKDDAT-WSGMIKVYERKG 206
M+ LG+ G +++A + + M K +A W ++ G
Sbjct: 388 EHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGALLNACHIHG 433
>gi|302765565|ref|XP_002966203.1| hypothetical protein SELMODRAFT_86405 [Selaginella moellendorffii]
gi|300165623|gb|EFJ32230.1| hypothetical protein SELMODRAFT_86405 [Selaginella moellendorffii]
Length = 916
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 242/651 (37%), Positives = 350/651 (53%), Gaps = 56/651 (8%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMP 64
+VV TA+V Y G + E+ +F M +N VSW M+ F + A ++ M
Sbjct: 267 DVVVATALVTMYGRCGSVDESIAVFEAMAVRNHVSWNAMIAAFAQCGHRSAAFAIYWRMQ 326
Query: 65 EK----DVVAQTNMVLGYCQDGRVDEGRE------IFDEMPKKNVISWTTMISGYVNNNR 114
++ + + + C D G I + +V+ T +++ Y +
Sbjct: 327 QEGFRPNKITFVTALKAACSSSSQDLGESAALHGWIACAGLEGDVMVGTALVTMYGSTGA 386
Query: 115 IDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVA----------- 163
ID AR F+ +P KN VSW AML Y GR ++A ELF AM +S+
Sbjct: 387 IDRARAAFDAIPAKNIVSWNAMLTAYGDNGRAREAMELFAAMKRQSLAPNKVSYLAVLGC 446
Query: 164 --------------------------SNSMILGLGQNGEVQKARVVFDQMREKDDATWSG 197
+N ++ ++G +++A FD KD +W+
Sbjct: 447 CEDVSEARSIHAEVVGNGLFAQESSIANGVVRMFARSGSLEEAMAAFDATVVKDSVSWNT 506
Query: 198 MIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQL-VRC 256
+ + I F MQ EG R + +L+SV+ VCA L +L+ GR + QL
Sbjct: 507 KVAALSAREDLHGAITAFYTMQHEGFRPDKFTLVSVVDVCADLGTLELGRSIQQQLSAAI 566
Query: 257 QFDVDVYVASVLITMYIKCGELV-KGKLIFDNFAS--KDIVMWNSIISGYAQYGLGEKSL 313
+ + DV V S ++ M KCG V + + +F KD+V WN++I+ YAQ+G G K+L
Sbjct: 567 EVERDVVVESAVMNMVAKCGSSVDECERLFARMPDDRKDLVAWNTMIAAYAQHGHGRKAL 626
Query: 314 KVFHEMFS-SGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPK-TEHYACMV 371
K+F M S V PD T V VLS CS+ G V++G F + +E + EHYAC+V
Sbjct: 627 KLFRIMQQRSSVRPDSSTFVSVLSGCSHAGLVEDGIHCFFLAREVLGIEQQPVEHYACLV 686
Query: 372 DLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAG 431
D+LGR G + +A I MP D+++W SLLGAC ++ L+ E AA+ ++L ++
Sbjct: 687 DVLGRMGYLREAEDFIRKMPLPADSVVWTSLLGACSSYGDLEGGERAARAFIELYRSDSV 746
Query: 432 PYILLSNIYASQGRFHDVAELRKNMRKRNVIK-PPGCSWIEVEKKVHMFTGRDCVSHPEH 490
Y++LSNIYA+ GR+ D +R++M +R V K PG S I V+ +VH F RD SHP+
Sbjct: 747 GYVVLSNIYAAAGRWEDSIRVREDMAERRVKKRAPGKSSIVVKNRVHEFFARD-RSHPQS 805
Query: 491 PMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVP 550
I LE++ GL+REAGY PD+ VLHDV+EE+K L YHSEKLA+A+GL+ +P
Sbjct: 806 DEIYAELERLKGLIREAGYVPDTRLVLHDVEEEQKEQLLWYHSEKLAIAFGLISVPHRHS 865
Query: 551 IRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHF-KDGLCSCRDYW 600
IRV+KNLRVC DCH+A K I++V REI +RD NRFHHF KDG CSC DYW
Sbjct: 866 IRVIKNLRVCKDCHTATKFIARVTQREIAVRDCNRFHHFGKDGECSCGDYW 916
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 106/463 (22%), Positives = 204/463 (44%), Gaps = 62/463 (13%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTV-MLGGFIRDSRIDDA----R 57
ER++ TA++ Y + G + A +F ++ +++ W ++ D R D A R
Sbjct: 163 ERDLFVATALLDAYGKCGCVESALEVFSRIQVPDLICWNAAIMACAGNDERPDRALLLVR 222
Query: 58 RLF--DMMPEKDVVAQTNMVLGYCQD-GRVDEGREIFDEMPK----KNVISWTTMISGYV 110
R++ ++P + A +L C D + R I + + +V+ T +++ Y
Sbjct: 223 RMWLEGLLPNR---ASFVAILSSCGDHSSLPLARSIHARVEELGFLGDVVVATALVTMYG 279
Query: 111 NNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAM-------------- 156
+D + +FE M +N VSW AM+ + QCG A+ ++ M
Sbjct: 280 RCGSVDESIAVFEAMAVRNHVSWNAMIAAFAQCGHRSAAFAIYWRMQQEGFRPNKITFVT 339
Query: 157 PMKSVVASNSMILG---------------------------LGQNGEVQKARVVFDQMRE 189
+K+ +S+S LG G G + +AR FD +
Sbjct: 340 ALKAACSSSSQDLGESAALHGWIACAGLEGDVMVGTALVTMYGSTGAIDRARAAFDAIPA 399
Query: 190 KDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQV 249
K+ +W+ M+ Y G E ++LF M+++ + N S ++VL C ++ R +
Sbjct: 400 KNIVSWNAMLTAYGDNGRAREAMELFAAMKRQSLAPNKVSYLAVLGCCEDVS---EARSI 456
Query: 250 HAQLV-RCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGL 308
HA++V F + +A+ ++ M+ + G L + FD KD V WN+ ++ +
Sbjct: 457 HAEVVGNGLFAQESSIANGVVRMFARSGSLEEAMAAFDATVVKDSVSWNTKVAALSARED 516
Query: 309 GEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYA 368
++ F+ M G PD TLV V+ C+ G ++ GR I + + + VE +
Sbjct: 517 LHGAITAFYTMQHEGFRPDKFTLVSVVDVCADLGTLELGRSIQQQLSAAIEVERDVVVES 576
Query: 369 CMVDLLGRAG-QVEDAMKLIEAMPFE-PDAIIWGSLLGACRTH 409
+++++ + G V++ +L MP + D + W +++ A H
Sbjct: 577 AVMNMVAKCGSSVDECERLFARMPDDRKDLVAWNTMIAAYAQH 619
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 110/236 (46%), Gaps = 15/236 (6%)
Query: 180 ARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCAS 239
A F +R + ATW+ +I + V DL+T M+ E N P+ +++++V +
Sbjct: 78 ANAAFSALRSRGIATWNTLIAA---QSSPAAVFDLYTRMKLEERAENRPNRLTIIAVLGA 134
Query: 240 LASLD---------HGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFAS 290
+AS D R VH + + D++VA+ L+ Y KCG + +F
Sbjct: 135 IASGDPSSSSSSRAQARIVHDDIRGSDLERDLFVATALLDAYGKCGCVESALEVFSRIQV 194
Query: 291 KDIVMWNSIISGYAQYG-LGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGRE 349
D++ WN+ I A +++L + M+ G++P+ + V +LS+C + R
Sbjct: 195 PDLICWNAAIMACAGNDERPDRALLLVRRMWLEGLLPNRASFVAILSSCGDHSSLPLARS 254
Query: 350 IFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
I ++ + A +V + GR G V++++ + EAM + + W +++ A
Sbjct: 255 IHARVEELGFLGDVVVATA-LVTMYGRCGSVDESIAVFEAMAVR-NHVSWNAMIAA 308
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 82/198 (41%), Gaps = 28/198 (14%)
Query: 225 VNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLI 284
+ +L +L C A L GRQ+H Q+V+ + + + L+ MY KC L
Sbjct: 22 IPIETLAGLLRRCIGDADLAQGRQLHRQIVKQGLARNDLLGNYLVQMYSKCRSLDDANAA 81
Query: 285 FDNFASKDIVMWNSIISG----------YAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGV 334
F S+ I WN++I+ Y + L E++ P+ +T++ V
Sbjct: 82 FSALRSRGIATWNTLIAAQSSPAAVFDLYTRMKLEERAEN----------RPNRLTIIAV 131
Query: 335 LSACSYTGKV------KEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIE 388
L A + + R + + ++ L E ++D G+ G VE A+++
Sbjct: 132 LGAIASGDPSSSSSSRAQARIVHDDIRGSDL-ERDLFVATALLDAYGKCGCVESALEVFS 190
Query: 389 AMPFEPDAIIWGSLLGAC 406
+ PD I W + + AC
Sbjct: 191 RIQV-PDLICWNAAIMAC 207
>gi|297819536|ref|XP_002877651.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
lyrata]
gi|297323489|gb|EFH53910.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
lyrata]
Length = 1217
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 219/602 (36%), Positives = 340/602 (56%), Gaps = 18/602 (2%)
Query: 12 MVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQ 71
++R Y + A +F ++PE+NV+ VM+ ++ + + ++F M V
Sbjct: 81 LMRAYASLKDVATARKVFDEIPERNVIIINVMIRSYVNNGFYREGIQVFGTMCSCHVKPD 140
Query: 72 TNM---VLGYCQ-DGRVDEGREIFDEMPKKNVISW----TTMISGYVNNNRIDVARKLFE 123
VL C G + G++I K + S ++S Y + AR + +
Sbjct: 141 HYTFPCVLKACSCSGNIVIGKKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLD 200
Query: 124 VMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSV---VASNSMILGLGQNGEVQKA 180
M ++ VSW +++ GY Q R DA E+ + M + + + +L N +
Sbjct: 201 EMSRRDVVSWNSLVAGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENV 260
Query: 181 RVVFD---QMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVC 237
V D +M +K +W+ MI VY + +E ++L++ M+ +G + S+ SVL C
Sbjct: 261 MYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSGMEADGFEPDAVSITSVLPAC 320
Query: 238 ASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWN 297
++L G+++H + R + ++ + + LI MY KCG L + + +F+N S+D+V W
Sbjct: 321 GDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLDRARDVFENMKSRDVVSWT 380
Query: 298 SIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSK 357
++IS Y G G ++ +F +M SG++PD + V L+ACS+ G ++EGR F+ M
Sbjct: 381 AMISAYGFSGRGCDAVALFSKMQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDH 440
Query: 358 YLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEV 417
Y + P+ EH ACMVDLLGRAG+V++A K I+ MP EP+ +WG+LLGACR H D+ +
Sbjct: 441 YKITPRLEHLACMVDLLGRAGKVKEAYKFIQEMPMEPNERVWGALLGACRVHSNTDIGLL 500
Query: 418 AAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVH 477
AA KL QL P+ +G Y+LLSNIYA GR+ +V +R M+ + + K PG S +EV + +H
Sbjct: 501 AADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIH 560
Query: 478 MFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLA 537
F D SHP+ I R L+ + ++E GY PDS LHDV+EE+K L HSEKLA
Sbjct: 561 TFLVGD-RSHPQSAEIYRELDVLVKKMKELGYVPDSESALHDVEEEDKETHLAVHSEKLA 619
Query: 538 VAYGLVKLPE---GVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLC 594
+ + L+ E IR+ KNLR+CGDCH A KLIS++ REII+RD NRFH F+ G+C
Sbjct: 620 IVFALMNTEEEDSNNAIRITKNLRICGDCHVAAKLISQITSREIIIRDTNRFHVFRFGVC 679
Query: 595 SC 596
SC
Sbjct: 680 SC 681
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 88/199 (44%), Gaps = 5/199 (2%)
Query: 217 LMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCG 276
L QK + L VL L +L R VH++++ + + L+ Y
Sbjct: 33 LDQKNSPKETAFMLGQVLDTYPDLKTL---RTVHSRIISEDLRYNSSLGVKLMRAYASLK 89
Query: 277 ELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLS 336
++ + +FD +++++ N +I Y G + ++VF M S V PD T VL
Sbjct: 90 DVATARKVFDEIPERNVIIINVMIRSYVNNGFYREGIQVFGTMCSCHVKPDHYTFPCVLK 149
Query: 337 ACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDA 396
ACS +G + G++I S +K + +V + G+ G + +A +++ M D
Sbjct: 150 ACSCSGNIVIGKKIHGS-ATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMS-RRDV 207
Query: 397 IIWGSLLGACRTHMKLDLA 415
+ W SL+ + + D A
Sbjct: 208 VSWNSLVAGYAQNQRFDDA 226
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 56/269 (20%), Positives = 112/269 (41%), Gaps = 38/269 (14%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMP 64
N++ A++ Y + G + A +F M ++VVSWT M+ + R DA LF M
Sbjct: 344 NLLLENALIDMYAKCGCLDRARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKMQ 403
Query: 65 EK----DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARK 120
+ D +A + G ++EGR F M
Sbjct: 404 DSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDH----------------------- 440
Query: 121 LFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILG---LGQNGEV 177
+++ P ++ L+G + G++++A++ + MPM+ +LG + N ++
Sbjct: 441 -YKITPRLEHLACMVDLLG--RAGKVKEAYKFIQEMPMEPNERVWGALLGACRVHSNTDI 497
Query: 178 Q--KARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLS 235
A +F Q+ + + + +Y + G EV ++ +M+ +G++ N + S +
Sbjct: 498 GLLAADKLF-QLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGA--SNVE 554
Query: 236 VCASLASLDHGRQVHAQLVRCQFDVDVYV 264
V + + G + H Q ++DV V
Sbjct: 555 VNRIIHTFLVGDRSHPQSAEIYRELDVLV 583
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 80/178 (44%), Gaps = 21/178 (11%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVV----SWTVMLGGFIRDSRIDDA 56
M R+VVSWTAM+ Y G +A LF +M + +V ++ L +++
Sbjct: 371 MKSRDVVSWTAMISAYGFSGRGCDAVALFSKMQDSGLVPDSIAFVTTLAACSHAGLLEEG 430
Query: 57 RRLFDMM-------PEKDVVAQTNMVLGYCQDGRVDEGREIFDEMP-KKNVISWTTMISG 108
R F +M P + +A +LG + G+V E + EMP + N W ++
Sbjct: 431 RSCFKLMTDHYKITPRLEHLACMVDLLG--RAGKVKEAYKFIQEMPMEPNERVWGALLGA 488
Query: 109 YVNNNRIDV----ARKLFEVMPEKNEVSWTAMLMG-YTQCGRIQDAWELFKAMPMKSV 161
++ D+ A KLF++ PE++ + +L Y + GR ++ + M K +
Sbjct: 489 CRVHSNTDIGLLAADKLFQLAPEQS--GYYVLLSNIYAKAGRWEEVTNIRNIMKSKGL 544
>gi|356567218|ref|XP_003551818.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Glycine max]
Length = 727
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 221/618 (35%), Positives = 343/618 (55%), Gaps = 30/618 (4%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWT-VMLGGFIRDSRIDDARRLFDMM 63
+V W A++R Y M + ++ M WT V GF + L D
Sbjct: 118 DVFMWNAIIRSYSRNNMYRDTVEMYRWM------RWTGVHPDGFTFPYVLKACTELLDFG 171
Query: 64 PE-------------KDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYV 110
DV Q +V Y + G + + +FD + + ++SWT++ISGY
Sbjct: 172 LSCIIHGQIIKYGFGSDVFVQNGLVALYAKCGHIGVAKVVFDGLYHRTIVSWTSIISGYA 231
Query: 111 NNNRIDVARKLFEVMPEKN-EVSWTAM---LMGYTQCGRIQDAWELFKAMPMKSVVASNS 166
N + A ++F M + W A+ L YT ++ + + + +
Sbjct: 232 QNGKAVEALRMFSQMRNNGVKPDWIALVSILRAYTDVDDLEQGRSIHGFVIKMGLEDEPA 291
Query: 167 MILGL----GQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEG 222
+++ L + G V A+ FDQM+ + W+ MI Y + G+ E ++LF M
Sbjct: 292 LLISLTAFYAKCGLVTVAKSFFDQMKTTNVIMWNAMISGYAKNGHAEEAVNLFHYMISRN 351
Query: 223 VRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGK 282
++ + ++ S + A + SL+ + + + + + D++V + LI MY KCG + +
Sbjct: 352 IKPDSVTVRSAVLASAQVGSLELAQWMDDYVSKSNYGSDIFVNTSLIDMYAKCGSVEFAR 411
Query: 283 LIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTG 342
+FD + KD+VMW+++I GY +G G +++ ++H M +GV P+DVT +G+L+AC+++G
Sbjct: 412 RVFDRNSDKDVVMWSAMIMGYGLHGQGWEAINLYHVMKQAGVFPNDVTFIGLLTACNHSG 471
Query: 343 KVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSL 402
VKEG E+F MK + + P+ EHY+C+VDLLGRAG + +A I +P EP +WG+L
Sbjct: 472 LVKEGWELFHCMKD-FEIVPRNEHYSCVVDLLGRAGYLGEACAFIMKIPIEPGVSVWGAL 530
Query: 403 LGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVI 462
L AC+ + + L E AA KL L+P N G Y+ LSN+YAS + VA +R MR++ +
Sbjct: 531 LSACKIYRCVTLGEYAANKLFSLDPYNTGHYVQLSNLYASSCLWDCVAHVRVLMREKGLN 590
Query: 463 KPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDE 522
K G S IE+ K+ F D SHP I L+++ L+E G+ P + VLHD++
Sbjct: 591 KDLGYSVIEINGKLQAFHVGD-KSHPMAKEIFDELQRLERRLKEVGFVPYTESVLHDLNY 649
Query: 523 EEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRD 582
EEK +L +HSE++AVAYGL+ G +R+ KNLR C +CHSAIKLISK++ REII+RD
Sbjct: 650 EEKEENLSFHSERIAVAYGLISTAPGTTLRITKNLRACVNCHSAIKLISKLVEREIIVRD 709
Query: 583 ANRFHHFKDGLCSCRDYW 600
ANRFHHFKDGLCSC DYW
Sbjct: 710 ANRFHHFKDGLCSCGDYW 727
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 90/378 (23%), Positives = 179/378 (47%), Gaps = 34/378 (8%)
Query: 51 SRIDDA--RRLFDMMPEKDVVA--------QTNMVLGYCQDGRVDEGREIFDEMPKKNVI 100
S ID++ +R D + + V++ T +V G G++ R++FDE +V
Sbjct: 61 SLIDNSTHKRHLDQIHNRLVISGLQHNGFLMTKLVNGSSNLGQICYARKLFDEFCYPDVF 120
Query: 101 SWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLM-GYT------QCGRIQD----- 148
W +I Y NN +++ M WT + G+T C + D
Sbjct: 121 MWNAIIRSYSRNNMYRDTVEMYRWM------RWTGVHPDGFTFPYVLKACTELLDFGLSC 174
Query: 149 --AWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKG 206
++ K V N ++ + G + A+VVFD + + +W+ +I Y + G
Sbjct: 175 IIHGQIIKYGFGSDVFVQNGLVALYAKCGHIGVAKVVFDGLYHRTIVSWTSIISGYAQNG 234
Query: 207 YELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVAS 266
+E + +F+ M+ GV+ ++ +L+S+L + L+ GR +H +++ + + +
Sbjct: 235 KAVEALRMFSQMRNNGVKPDWIALVSILRAYTDVDDLEQGRSIHGFVIKMGLEDEPALLI 294
Query: 267 VLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMP 326
L Y KCG + K FD + +++MWN++ISGYA+ G E+++ +FH M S + P
Sbjct: 295 SLTAFYAKCGLVTVAKSFFDQMKTTNVIMWNAMISGYAKNGHAEEAVNLFHYMISRNIKP 354
Query: 327 DDVTLVGVLSACSYTGKVKEGREIFESM-KSKYLVEPKTEHYACMVDLLGRAGQVEDAMK 385
D VT+ + A + G ++ + + + + KS Y + ++D+ + G VE A +
Sbjct: 355 DSVTVRSAVLASAQVGSLELAQWMDDYVSKSNYGSDIFVN--TSLIDMYAKCGSVEFARR 412
Query: 386 LIEAMPFEPDAIIWGSLL 403
+ + + D ++W +++
Sbjct: 413 VFDRNS-DKDVVMWSAMI 429
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 125/278 (44%), Gaps = 20/278 (7%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV-VSWTVMLGGFIRDSRIDDARR- 58
+ R +VSWT+++ GY + G EA +F QM V W ++ + +DD +
Sbjct: 215 LYHRTIVSWTSIISGYAQNGKAVEALRMFSQMRNNGVKPDWIALVSILRAYTDVDDLEQG 274
Query: 59 ------LFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+ M E + ++ Y + G V + FD+M NVI W MISGY N
Sbjct: 275 RSIHGFVIKMGLEDEPALLISLTAFYAKCGLVTVAKSFFDQMKTTNVIMWNAMISGYAKN 334
Query: 113 NRIDVARKLFEVMPEKN----EVSWTAMLMGYTQCGRIQDA-W---ELFKAMPMKSVVAS 164
+ A LF M +N V+ + ++ Q G ++ A W + K+ + +
Sbjct: 335 GHAEEAVNLFHYMISRNIKPDSVTVRSAVLASAQVGSLELAQWMDDYVSKSNYGSDIFVN 394
Query: 165 NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVR 224
S+I + G V+ AR VFD+ +KD WS MI Y G E I+L+ +M++ GV
Sbjct: 395 TSLIDMYAKCGSVEFARRVFDRNSDKDVVMWSAMIMGYGLHGQGWEAINLYHVMKQAGVF 454
Query: 225 VNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDV 262
N + I +L+ C + G +L C D ++
Sbjct: 455 PNDVTFIGLLTACNHSGLVKEGW----ELFHCMKDFEI 488
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 81/177 (45%), Gaps = 12/177 (6%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
M NV+ W AM+ GY + G EA LF M +N+ +V + + S + L
Sbjct: 316 MKTTNVIMWNAMISGYAKNGHAEEAVNLFHYMISRNIKPDSVTVRSAVLASAQVGSLELA 375
Query: 61 DMMPE--------KDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
M + D+ T+++ Y + G V+ R +FD K+V+ W+ MI GY +
Sbjct: 376 QWMDDYVSKSNYGSDIFVNTSLIDMYAKCGSVEFARRVFDRNSDKDVVMWSAMIMGYGLH 435
Query: 113 NRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASN 165
+ A L+ VM + N+V++ +L G +++ WELF M +V N
Sbjct: 436 GQGWEAINLYHVMKQAGVFPNDVTFIGLLTACNHSGLVKEGWELFHCMKDFEIVPRN 492
>gi|242051881|ref|XP_002455086.1| hypothetical protein SORBIDRAFT_03g004125 [Sorghum bicolor]
gi|241927061|gb|EES00206.1| hypothetical protein SORBIDRAFT_03g004125 [Sorghum bicolor]
Length = 627
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 194/467 (41%), Positives = 290/467 (62%), Gaps = 1/467 (0%)
Query: 134 TAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDA 193
A++ Y +C + AW++F M ++SVV+ S++ GL + G+V +AR +FD+M E+D
Sbjct: 162 NALVDMYAECADMGSAWKVFDGMQVRSVVSWTSLLSGLARLGQVDEARDLFDRMPERDTV 221
Query: 194 TWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQL 253
+W+ MI Y E +++F MQ V + +++SV++ CA L +L+ G V +
Sbjct: 222 SWTAMIDGYVWAARFREALEMFREMQYSNVSADEFTMVSVITACAQLGALEMGEWVRVYM 281
Query: 254 VRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSL 313
R +D +V + LI MY KCG + + +F +D W +II G A G E+++
Sbjct: 282 SRQGIKMDAFVGNALIDMYSKCGSIERALDVFKGMHHRDKFTWTAIILGLAVNGYEEEAI 341
Query: 314 KVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDL 373
++FH M PD+VT +GVL+AC++ G V +GRE F SM Y + P HY C++DL
Sbjct: 342 EMFHRMIRVSETPDEVTFIGVLTACTHAGLVDKGREFFLSMIEAYNIAPNVVHYGCIIDL 401
Query: 374 LGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPY 433
LGRAG++ +A+ I+ MP P++ IWG+LL ACR H ++ E+ A++LL+L+P+N+ Y
Sbjct: 402 LGRAGKITEALDTIDQMPMTPNSTIWGTLLAACRVHGNSEIGELVAERLLELDPENSMVY 461
Query: 434 ILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMI 493
ILLSNIYA R+ DV LR + ++ + K PGCS IE++ +H F D SHP I
Sbjct: 462 ILLSNIYAKCNRWEDVRRLRHAIMEKGIKKEPGCSLIEMDGIIHEFVAGD-QSHPMSKEI 520
Query: 494 MRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRV 553
LE I L GY PD + V +V E+EK L +HSEKLA+A+ L+ IR+
Sbjct: 521 YSKLESIISDLNNVGYFPDVTEVFVEVAEKEKKKVLYWHSEKLAIAFALLSSKPNTVIRI 580
Query: 554 MKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
+KNLR+C DCH+AIKLIS++ GRE+++RD RFHHF+ G CSC+DYW
Sbjct: 581 VKNLRMCLDCHNAIKLISRLYGREVVVRDRTRFHHFRHGFCSCKDYW 627
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 79/354 (22%), Positives = 149/354 (42%), Gaps = 50/354 (14%)
Query: 7 VSWTAMVRGYVEEGMITEAGTLFWQMPEKNV----VSWTVMLGGFIRDSR-----IDDAR 57
V+W A++ G+ G E+ F M V++ +L + +R +
Sbjct: 88 VAWNALISGHNRGGRFGESCGSFVDMARAGAAPTPVTYVSVLSACGKGTRDVLLGMQVHG 147
Query: 58 RLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDV 117
R+ D+ + +V Y + + ++FD M ++V+SWT+++SG ++D
Sbjct: 148 RVVGSGVLPDLRVENALVDMYAECADMGSAWKVFDGMQVRSVVSWTSLLSGLARLGQVDE 207
Query: 118 ARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVA-------------- 163
AR LF+ MPE++ VSWTAM+ GY R ++A E+F+ M +V A
Sbjct: 208 ARDLFDRMPERDTVSWTAMIDGYVWAARFREALEMFREMQYSNVSADEFTMVSVITACAQ 267
Query: 164 -------------------------SNSMILGLGQNGEVQKARVVFDQMREKDDATWSGM 198
N++I + G +++A VF M +D TW+ +
Sbjct: 268 LGALEMGEWVRVYMSRQGIKMDAFVGNALIDMYSKCGSIERALDVFKGMHHRDKFTWTAI 327
Query: 199 IKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRC-Q 257
I GYE E I++F M + + + I VL+ C +D GR+ ++
Sbjct: 328 ILGLAVNGYEEEAIEMFHRMIRVSETPDEVTFIGVLTACTHAGLVDKGREFFLSMIEAYN 387
Query: 258 FDVDVYVASVLITMYIKCGELVKGKLIFDNFA-SKDIVMWNSIISGYAQYGLGE 310
+V +I + + G++ + D + + +W ++++ +G E
Sbjct: 388 IAPNVVHYGCIIDLLGRAGKITEALDTIDQMPMTPNSTIWGTLLAACRVHGNSE 441
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 105/245 (42%), Gaps = 23/245 (9%)
Query: 226 NFPSLI-SVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLI 284
FP+L+ +V S R VHA +VR + +VAS L+ Y G+ + +
Sbjct: 21 TFPALLKAVARAAGGSGSAAPARAVHAHVVRLGMGRNAHVASSLVAAYTAGGDGAAARAL 80
Query: 285 FDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKV 344
+ V WN++ISG+ + G +S F +M +G P VT V VLSAC
Sbjct: 81 VGECDTP--VAWNALISGHNRGGRFGESCGSFVDMARAGAAPTPVTYVSVLSACG----- 133
Query: 345 KEGREIFESMK-------SKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAI 397
K R++ M+ S L + + E+ +VD+ + A K+ + M +
Sbjct: 134 KGTRDVLLGMQVHGRVVGSGVLPDLRVEN--ALVDMYAECADMGSAWKVFDGMQVR-SVV 190
Query: 398 IWGSLLGACRTHMKLDLAEVAAKKLLQLEP-KNAGPYILLSNIYASQGRFHDVAELRKNM 456
W SLL ++D A+ L P ++ + + + Y RF + E+ + M
Sbjct: 191 SWTSLLSGLARLGQVD----EARDLFDRMPERDTVSWTAMIDGYVWAARFREALEMFREM 246
Query: 457 RKRNV 461
+ NV
Sbjct: 247 QYSNV 251
>gi|242096978|ref|XP_002438979.1| hypothetical protein SORBIDRAFT_10g029325 [Sorghum bicolor]
gi|241917202|gb|EER90346.1| hypothetical protein SORBIDRAFT_10g029325 [Sorghum bicolor]
Length = 723
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 217/592 (36%), Positives = 342/592 (57%), Gaps = 12/592 (2%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
+P + ++ Y G+ +A F ++P K+ V W ++GG +R +D+ARRL
Sbjct: 133 LPSAARIVANPLIHMYASLGLTDDARRAFDEVPVKDAVVWATVIGGLVRWGLLDEARRLL 192
Query: 61 DMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNV----ISWTTMISGYVNNNRID 116
PE++VV+ T+++ GY + GR + F+ M V ++ +S ++
Sbjct: 193 VQAPERNVVSWTSLIAGYSRAGRPADAVYCFNCMLSDGVEPDEVAVIGALSACSKLKNLE 252
Query: 117 VARKLFEVMPEKNEVSWTAMLM-----GYTQCGRIQDAWELFKAMPM-KSVVASNSMILG 170
R L ++ K + T L+ Y +CG I A +F A+ + N +I G
Sbjct: 253 FGR-LLHLLVGKKRIQMTDKLVVTLIDMYAKCGDIAQAQAVFDAVGRGQKPEPWNVIIDG 311
Query: 171 LGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSL 230
+ G V AR +FDQM +D T++ MI Y G + + LF +++ G+R + ++
Sbjct: 312 YCKLGHVDIARSLFDQMGARDVITFNSMITGYIHSGRLRDALQLFMQLRRHGMRADNFTV 371
Query: 231 ISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFAS 290
+S+L+ CASL +L GR +HA + + + DVY+ + L+ MY+KCG + + +F
Sbjct: 372 VSLLTACASLGALPQGRALHASIEQRIVEEDVYLVTALVDMYMKCGRVDEATAVFHRMGE 431
Query: 291 KDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREI 350
+D+ W+++I+G A G+G +L+ F +M G P VT + VL+ACS++ + EGR+
Sbjct: 432 RDVHTWSAMIAGLAFNGMGMDALESFCQMKRDGFQPTSVTYIAVLTACSHSSLLNEGRQH 491
Query: 351 FESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHM 410
F M+S + + P+ EHY CM+DLL R+G +++AM L++ MP +P+A+IW S+L ACR H
Sbjct: 492 FNEMRSLHKLHPQIEHYGCMIDLLARSGLLDEAMHLVQTMPMQPNAVIWASILSACRVHK 551
Query: 411 KLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWI 470
+DLA AA+ LL+L P+ Y+ L NIY ++ + +R M ++ V K G S I
Sbjct: 552 NIDLARHAAEHLLKLAPEEDAVYVQLYNIYIDSRQWVEAKRIRMLMEEQGVKKTAGYSSI 611
Query: 471 EVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLR 530
V +VH F D SHP I+ M+E+I L+ AGY P +S + DVDEEEK +L
Sbjct: 612 TVAGQVHKFVVND-QSHPWTLEIITMMEEIARRLKSAGYSPATSRIAVDVDEEEKEQALL 670
Query: 531 YHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRD 582
HSEK+A+A+GL+ LP +PI +MKNLRVC DCHSAIKLIS++ REII+RD
Sbjct: 671 AHSEKIAIAFGLISLPPNLPIHIMKNLRVCEDCHSAIKLISQLWNREIIVRD 722
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 149/316 (47%), Gaps = 34/316 (10%)
Query: 121 LFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKA 180
L ++P + ++ Y G DA F +P+K V ++I GL + G + +A
Sbjct: 129 LRTMLPSAARIVANPLIHMYASLGLTDDARRAFDEVPVKDAVVWATVIGGLVRWGLLDEA 188
Query: 181 RVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASL 240
R + Q E++ +W+ +I Y R G + + F M +GV + ++I LS C+ L
Sbjct: 189 RRLLVQAPERNVVSWTSLIAGYSRAGRPADAVYCFNCMLSDGVEPDEVAVIGALSACSKL 248
Query: 241 ASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLI---------------- 284
+L+ GR +H + + + + + LI MY KCG++ + + +
Sbjct: 249 KNLEFGRLLHLLVGKKRIQMTDKLVVTLIDMYAKCGDIAQAQAVFDAVGRGQKPEPWNVI 308
Query: 285 ----------------FDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDD 328
FD ++D++ +NS+I+GY G +L++F ++ G+ D+
Sbjct: 309 IDGYCKLGHVDIARSLFDQMGARDVITFNSMITGYIHSGRLRDALQLFMQLRRHGMRADN 368
Query: 329 VTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIE 388
T+V +L+AC+ G + +GR + S++ + +VE +VD+ + G+V++A +
Sbjct: 369 FTVVSLLTACASLGALPQGRALHASIEQR-IVEEDVYLVTALVDMYMKCGRVDEATAVFH 427
Query: 389 AMPFEPDAIIWGSLLG 404
M E D W +++
Sbjct: 428 RMG-ERDVHTWSAMIA 442
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 103/259 (39%), Gaps = 38/259 (14%)
Query: 233 VLSVCASLASLDHGRQVHAQLVRCQF-DVDVYVASVLITMYIKCGELVKGKLIFDNFASK 291
V CA+ A R +HA +R VA+ LI MY G + FD K
Sbjct: 108 VFRCCAAGAGAGLCRMLHAACLRTMLPSAARIVANPLIHMYASLGLTDDARRAFDEVPVK 167
Query: 292 D-------------------------------IVMWNSIISGYAQYGLGEKSLKVFHEMF 320
D +V W S+I+GY++ G ++ F+ M
Sbjct: 168 DAVVWATVIGGLVRWGLLDEARRLLVQAPERNVVSWTSLIAGYSRAGRPADAVYCFNCML 227
Query: 321 SSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQV 380
S GV PD+V ++G LSACS ++ GR + + K ++ + ++D+ + G +
Sbjct: 228 SDGVEPDEVAVIGALSACSKLKNLEFGR-LLHLLVGKKRIQMTDKLVVTLIDMYAKCGDI 286
Query: 381 EDAMKLIEAMPFEPDAIIWGSLL-GACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNI 439
A + +A+ W ++ G C KL ++A Q+ ++ + +
Sbjct: 287 AQAQAVFDAVGRGQKPEPWNVIIDGYC----KLGHVDIARSLFDQMGARDVITFNSMITG 342
Query: 440 YASQGRFHDVAELRKNMRK 458
Y GR D +L +R+
Sbjct: 343 YIHSGRLRDALQLFMQLRR 361
>gi|359495864|ref|XP_002266254.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g65570-like [Vitis vinifera]
Length = 751
Score = 400 bits (1028), Expect = e-108, Method: Compositional matrix adjust.
Identities = 221/621 (35%), Positives = 363/621 (58%), Gaps = 26/621 (4%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVV----SWTVMLGGFIRDSRIDDA 56
+P R++V+W +M+ Y+ G EA ++ +M ++ +++ + F + +
Sbjct: 136 VPHRHIVAWNSMIASYIRNGRSKEAIDIYQRMVPDGILPDEFTFSSVFKAFSDLGLVHEG 195
Query: 57 RRLFDM-----MPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVN 111
+R + +V + +V Y + G++ + R + D++ K+V+ +T +I GY +
Sbjct: 196 QRAHGQSVVLGVGVSNVFVGSALVDMYAKFGKMRDARLVSDQVVGKDVVLFTALIVGYSH 255
Query: 112 NNRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWE------LFKAMPMKSV 161
+ + ++F M +K NE + +++L+ CG ++D L ++S
Sbjct: 256 HGEDGESLQVFRNMTKKGIEANEYTLSSVLVC---CGNLEDLTSGRLIHGLIVKAGLESA 312
Query: 162 VASNSMILGLG-QNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQK 220
VAS + +L + + G V + VF Q + TW+ +I + G E + F M +
Sbjct: 313 VASQTSLLTMYYRCGLVDDSLKVFKQFINPNQVTWTSVIVGLVQNGREEIALLKFRQMLR 372
Query: 221 EGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVK 280
+ N +L SVL C+SLA L+ G+Q+HA +++ D+D YV + LI Y KCG
Sbjct: 373 SSITPNSFTLSSVLRACSSLAMLEQGKQIHAIVMKFGLDIDKYVGAALIDFYGKCGSTEI 432
Query: 281 GKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSY 340
+ +F+ D+V NS+I YAQ G G ++L++F M +G+ P++VT +GVLSAC+
Sbjct: 433 ARSVFNGLLEVDVVSVNSMIYSYAQNGFGHEALQLFSGMKDTGLEPNNVTWLGVLSACNN 492
Query: 341 TGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWG 400
G ++EG IF S ++ +E +HYACMVDLLGRAG++++A LI + D +IW
Sbjct: 493 AGLLEEGCHIFSSARNSGNIELTKDHYACMVDLLGRAGRLKEAEMLINQVNI-SDVVIWR 551
Query: 401 SLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRN 460
+LL ACR H +++A+ +++ L P++ G ++LLSN+YAS G + V E++ MR+
Sbjct: 552 TLLSACRIHGDVEMAKRVMNRVIDLAPEDGGTHVLLSNLYASTGNWSKVIEMKSAMREMR 611
Query: 461 VIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDV 520
+ K P SW++VE+++H F D SHP I LE++ ++E GY PD+ FVL D+
Sbjct: 612 LKKNPAMSWVDVEREIHTFMAGDW-SHPNFRDIREKLEELIEKVKELGYVPDTRFVLQDL 670
Query: 521 DEEEKVHSLRYHSEKLAVAYGLVKLP-EGVPIRVMKNLRVCGDCHSAIKLISKVMGREII 579
DEE+K+ SL YHSEKLAVA+ L + + IR++KNLRVCGDCH+ +K +SK++GR+II
Sbjct: 671 DEEKKIRSLYYHSEKLAVAFALWRSNYKNTTIRILKNLRVCGDCHTWMKFVSKIVGRDII 730
Query: 580 LRDANRFHHFKDGLCSCRDYW 600
RD RFHHF++GLCSC DYW
Sbjct: 731 ARDVKRFHHFRNGLCSCGDYW 751
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 89/341 (26%), Positives = 177/341 (51%), Gaps = 15/341 (4%)
Query: 74 MVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNR----IDVARKLFE--VMPE 127
++ Y + G V R++FDE+P +++++W +MI+ Y+ N R ID+ +++ ++P+
Sbjct: 116 LIDAYLKCGSVVYARKVFDEVPHRHIVAWNSMIASYIRNGRSKEAIDIYQRMVPDGILPD 175
Query: 128 KNEVSWTAMLMGYTQCGRIQD-----AWELFKAMPMKSVVASNSMILGLGQNGEVQKARV 182
E +++++ ++ G + + + + + +V ++++ + G+++ AR+
Sbjct: 176 --EFTFSSVFKAFSDLGLVHEGQRAHGQSVVLGVGVSNVFVGSALVDMYAKFGKMRDARL 233
Query: 183 VFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLAS 242
V DQ+ KD ++ +I Y G + E + +F M K+G+ N +L SVL C +L
Sbjct: 234 VSDQVVGKDVVLFTALIVGYSHHGEDGESLQVFRNMTKKGIEANEYTLSSVLVCCGNLED 293
Query: 243 LDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISG 302
L GR +H +V+ + V + L+TMY +CG + +F F + + V W S+I G
Sbjct: 294 LTSGRLIHGLIVKAGLESAVASQTSLLTMYYRCGLVDDSLKVFKQFINPNQVTWTSVIVG 353
Query: 303 YAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEP 362
Q G E +L F +M S + P+ TL VL ACS +++G++I ++ K+ ++
Sbjct: 354 LVQNGREEIALLKFRQMLRSSITPNSFTLSSVLRACSSLAMLEQGKQI-HAIVMKFGLDI 412
Query: 363 KTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
A ++D G+ G E A + + E D + S++
Sbjct: 413 DKYVGAALIDFYGKCGSTEIARSVFNGL-LEVDVVSVNSMI 452
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 130/261 (49%), Gaps = 3/261 (1%)
Query: 165 NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVR 224
N +I + G V AR VFD++ + W+ MI Y R G E ID++ M +G+
Sbjct: 114 NKLIDAYLKCGSVVYARKVFDEVPHRHIVAWNSMIASYIRNGRSKEAIDIYQRMVPDGIL 173
Query: 225 VNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDV-DVYVASVLITMYIKCGELVKGKL 283
+ + SV + L + G++ H Q V V +V+V S L+ MY K G++ +L
Sbjct: 174 PDEFTFSSVFKAFSDLGLVHEGQRAHGQSVVLGVGVSNVFVGSALVDMYAKFGKMRDARL 233
Query: 284 IFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGK 343
+ D KD+V++ ++I GY+ +G +SL+VF M G+ ++ TL VL C
Sbjct: 234 VSDQVVGKDVVLFTALIVGYSHHGEDGESLQVFRNMTKKGIEANEYTLSSVLVCCGNLED 293
Query: 344 VKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
+ GR + + K +E ++ + R G V+D++K+ + P+ + W S++
Sbjct: 294 LTSGR-LIHGLIVKAGLESAVASQTSLLTMYYRCGLVDDSLKVFKQF-INPNQVTWTSVI 351
Query: 404 GACRTHMKLDLAEVAAKKLLQ 424
+ + ++A + +++L+
Sbjct: 352 VGLVQNGREEIALLKFRQMLR 372
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 85/178 (47%), Gaps = 3/178 (1%)
Query: 232 SVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASK 291
S++ C + S+ ++ + ++ F + + LI Y+KCG +V + +FD +
Sbjct: 82 SLIQQCIGIKSITDITKIQSHALKRGFHHSL--GNKLIDAYLKCGSVVYARKVFDEVPHR 139
Query: 292 DIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIF 351
IV WNS+I+ Y + G ++++ ++ M G++PD+ T V A S G V EG+
Sbjct: 140 HIVAWNSMIASYIRNGRSKEAIDIYQRMVPDGILPDEFTFSSVFKAFSDLGLVHEGQRAH 199
Query: 352 ESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTH 409
+ + +VD+ + G++ DA +L+ D +++ +L+ H
Sbjct: 200 GQSVVLGVGVSNVFVGSALVDMYAKFGKMRDA-RLVSDQVVGKDVVLFTALIVGYSHH 256
>gi|449501934|ref|XP_004161498.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Cucumis sativus]
Length = 638
Score = 400 bits (1028), Expect = e-108, Method: Compositional matrix adjust.
Identities = 214/558 (38%), Positives = 326/558 (58%), Gaps = 42/558 (7%)
Query: 53 IDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKK----NVISWTTMISG 108
+ DAR +FD MP+++VV+ T M+ Y Q G E +F EM + N ++ T+++
Sbjct: 113 LGDARGMFDEMPQRNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILTS 172
Query: 109 YVNNNRIDVARKLFEVMPEKNEVSW----TAMLMGYTQCGRIQDAWELFKAMPMKSVVAS 164
+ + R++ + ++N S +++L Y + GRI DA +F +P + VVA
Sbjct: 173 CYGSLGFETGRQIHSIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPERDVVAC 232
Query: 165 NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVR 224
++I G Y + G + E + LF +Q EG+
Sbjct: 233 TAIISG-------------------------------YAQMGLDEEALKLFRQLQIEGMN 261
Query: 225 VNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLI 284
N + SVL+ + LA+L+HG+QVH+ ++R V + + LI MY KCG + + I
Sbjct: 262 SNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVLLNSLIDMYSKCGNVCYARRI 321
Query: 285 FDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSG-VMPDDVTLVGVLSACSYTGK 343
FD+ + + WN+++ GY+++G+ + L++F M V PD +T + VLS CS+
Sbjct: 322 FDSMPERTCISWNAMLVGYSKHGMAREVLELFKLMREENKVKPDSITYLAVLSGCSHGQL 381
Query: 344 VKEGREIFESM-KSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSL 402
G EIF +M K +EP HY C+VDLLGRAG+VE+A I+ MPF P A IWGSL
Sbjct: 382 EDMGLEIFYNMVNGKDGIEPDIGHYGCVVDLLGRAGRVEEAFDFIKKMPFVPTAAIWGSL 441
Query: 403 LGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVI 462
LG+CR H +++ + +KLL+LEP+NAG Y++LSN+YAS G++ D+ +R M+++ V
Sbjct: 442 LGSCRVHSDVEIGIIVGQKLLELEPENAGNYVILSNLYASAGKWEDMRNIRDLMQEKAVT 501
Query: 463 KPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDE 522
K PG SW+E+++ VH F D +HP + ++++ +E GY PD S VL+DVDE
Sbjct: 502 KEPGRSWVELDQIVHTFHASD-HTHPRREEVANKVKELSIKFKEDGYVPDLSCVLYDVDE 560
Query: 523 EEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRD 582
E+K L HSEKLA+A+GL+ PEG IRV+KNLR+C DCHS K +S++ R +ILRD
Sbjct: 561 EQKEKVLLGHSEKLALAFGLIATPEGTTIRVIKNLRICVDCHSFAKFVSRLYARTVILRD 620
Query: 583 ANRFHHFKDGLCSCRDYW 600
NRFH+ G+CSC DYW
Sbjct: 621 KNRFHNIVGGVCSCGDYW 638
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 110/223 (49%), Gaps = 3/223 (1%)
Query: 222 GVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKG 281
G V F S+L+ C S ++ G++VH +++ + VY+ + LI +Y KC L
Sbjct: 57 GREVKFEGYDSILNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDA 116
Query: 282 KLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYT 341
+ +FD +++V W ++IS Y+Q G ++L +F EM S P+ T +L++C +
Sbjct: 117 RGMFDEMPQRNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGS 176
Query: 342 GKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGS 401
+ GR+I S+ K E + ++D+ ++G++ DA + +P E D + +
Sbjct: 177 LGFETGRQI-HSIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLP-ERDVVACTA 234
Query: 402 LLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQG 444
++ M LD + + LQ+E N+ S + A G
Sbjct: 235 IISG-YAQMGLDEEALKLFRQLQIEGMNSNSVTYASVLTALSG 276
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 133/294 (45%), Gaps = 50/294 (17%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDV- 68
T ++ Y + + +A +F +MP++NVVSWT M+ + + +A LF M D
Sbjct: 101 TRLIVLYNKCDCLGDARGMFDEMPQRNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTE 160
Query: 69 ----VAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISW----TTMISGYVNNNRIDVARK 120
T + Y G + GR+I K+N S ++++ Y + RI A
Sbjct: 161 PNHFTFATILTSCYGSLG-FETGRQIHSIAIKRNYESHMFVGSSLLDMYAKSGRICDAHG 219
Query: 121 LFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKS-------------------- 160
+F +PE++ V+ TA++ GY Q G ++A +LF+ + ++
Sbjct: 220 VFHCLPERDVVACTAIISGYAQMGLDEEALKLFRQLQIEGMNSNSVTYASVLTALSGLAA 279
Query: 161 -------------------VVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKV 201
VV NS+I + G V AR +FD M E+ +W+ M+
Sbjct: 280 LNHGKQVHSHVLRSGQYSYVVLLNSLIDMYSKCGNVCYARRIFDSMPERTCISWNAMLVG 339
Query: 202 YERKGYELEVIDLFTLMQKEG-VRVNFPSLISVLSVCASLASLDHGRQVHAQLV 254
Y + G EV++LF LM++E V+ + + ++VLS C+ D G ++ +V
Sbjct: 340 YSKHGMAREVLELFKLMREENKVKPDSITYLAVLSGCSHGQLEDMGLEIFYNMV 393
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 111/238 (46%), Gaps = 47/238 (19%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM----PEKNVVSWTVMLGG---------- 46
MP+RNVVSWTAM+ Y + G EA LF +M E N ++ +L
Sbjct: 123 MPQRNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLGFETG 182
Query: 47 -------------------------FIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQD 81
+ + RI DA +F +PE+DVVA T ++ GY Q
Sbjct: 183 RQIHSIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIISGYAQM 242
Query: 82 GRVDEGREIFDEMP----KKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAML 137
G +E ++F ++ N +++ ++++ ++ +++ + + S+ +L
Sbjct: 243 GLDEEALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVLL 302
Query: 138 MG----YTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKD 191
Y++CG + A +F +MP ++ ++ N+M++G ++G ++ +F MRE++
Sbjct: 303 NSLIDMYSKCGNVCYARRIFDSMPERTCISWNAMLVGYSKHGMAREVLELFKLMREEN 360
>gi|297820538|ref|XP_002878152.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
lyrata]
gi|297323990|gb|EFH54411.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
lyrata]
Length = 886
Score = 400 bits (1028), Expect = e-108, Method: Compositional matrix adjust.
Identities = 212/544 (38%), Positives = 319/544 (58%), Gaps = 22/544 (4%)
Query: 78 YCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEK-----NEVS 132
YC +V G +FD M + + W MI+GY N + A LF M E N +
Sbjct: 344 YCNCKQVLSGCRVFDGMFDRKIGLWNAMITGYAQNEYDEEALLLFIEMEESAGLLANSTT 403
Query: 133 WTAMLMGYTQCGRIQDAWELFKAMPMKSV----VASNSMILGLGQNGEVQKARVVFDQMR 188
++ + G + + + + N+++ + G++ A+ +F +M
Sbjct: 404 MAGVVPACVRSGAFSKKEAIHGFVVKRGLDRDRFVQNALMDMYSRLGKIDIAKRIFGKME 463
Query: 189 EKDDATWSGMIKVY---ERKGYELEVIDLFTLMQKEG--------VRVNFPSLISVLSVC 237
++D TW+ +I Y ER L ++ +++++ ++ N +L+++L C
Sbjct: 464 DRDLVTWNTIITGYVFSERHEDALLMLHKMQILERKASERASRVSLKPNSITLMTILPSC 523
Query: 238 ASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWN 297
A+L++L G+++HA ++ DV V S L+ MY KCG L + +FD ++++ WN
Sbjct: 524 AALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPIRNVITWN 583
Query: 298 SIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSK 357
I+ Y +G + ++ + M GV P++VT + V +ACS++G V EG +IF +MK
Sbjct: 584 VIVMAYGMHGNSQDAIDMLRMMMVQGVKPNEVTFISVFAACSHSGMVNEGLKIFYNMKKD 643
Query: 358 YLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPD-AIIWGSLLGACRTHMKLDLAE 416
Y VEP ++HYAC+VDLLGRAG+V++A +LI +P D A W SLLGACR H L++ E
Sbjct: 644 YGVEPSSDHYACVVDLLGRAGRVKEAYQLINLIPRNFDKAGAWSSLLGACRIHNNLEIGE 703
Query: 417 VAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKV 476
+AA+ L+QLEP A Y+LL+NIY+S G ++ E+R+NM+ + V K PGCSWIE +V
Sbjct: 704 IAAQNLIQLEPNVASHYVLLANIYSSAGLWYKATEVRRNMKAQGVRKEPGCSWIEHGDEV 763
Query: 477 HMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKL 536
H F D SHP+ + LE + +R+ GY PD+S VLH+V+E+EK L HSEKL
Sbjct: 764 HKFVAGDS-SHPQSEKLRGYLETLWERMRKEGYIPDTSCVLHNVEEDEKEILLCGHSEKL 822
Query: 537 AVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSC 596
A+A+G++ G IRV KNLRVC DCH A K ISKV+ REIILRD RFHHFK+G CSC
Sbjct: 823 AIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKVVDREIILRDVRRFHHFKNGTCSC 882
Query: 597 RDYW 600
DYW
Sbjct: 883 GDYW 886
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 86/350 (24%), Positives = 170/350 (48%), Gaps = 18/350 (5%)
Query: 68 VVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPE 127
V +V Y + G ++FD + ++N +SW ++IS + + ++A + F M +
Sbjct: 129 VTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLD 188
Query: 128 KN-EVSWTAMLMGYTQC-----------GRIQDAWELFKAMPMKSVVASNSMILGLGQNG 175
++ E S ++ C G+ A+ L K ++ N+++ G+ G
Sbjct: 189 EDVEPSSFTLVSVALACSNFPMPEGLLMGKQVHAYGLRKGELNSFII--NTLVAMYGKMG 246
Query: 176 EVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLS 235
++ ++V+ +D TW+ ++ + LE ++ M EGV + ++ SVL
Sbjct: 247 KLASSKVLLGSFEGRDLVTWNTVLSSLCQNEQFLEALEYLREMVLEGVEPDGFTISSVLP 306
Query: 236 VCASLASLDHGRQVHA-QLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIV 294
C+ L L G+++HA L D + +V S L+ MY C +++ G +FD + I
Sbjct: 307 ACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGCRVFDGMFDRKIG 366
Query: 295 MWNSIISGYAQYGLGEKSLKVFHEM-FSSGVMPDDVTLVGVLSACSYTGKVKEGREIFES 353
+WN++I+GYAQ E++L +F EM S+G++ + T+ GV+ AC +G + I
Sbjct: 367 LWNAMITGYAQNEYDEEALLLFIEMEESAGLLANSTTMAGVVPACVRSGAFSKKEAIHGF 426
Query: 354 MKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
+ + L + A M D+ R G+++ A ++ M + D + W +++
Sbjct: 427 VVKRGLDRDRFVQNALM-DMYSRLGKIDIAKRIFGKME-DRDLVTWNTII 474
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 126/250 (50%), Gaps = 11/250 (4%)
Query: 160 SVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKV---YERKGYELEVIDLFT 216
SV +N+++ + G+ VFD++ E++ +W+ +I +E+ LE F
Sbjct: 128 SVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEA---FR 184
Query: 217 LMQKEGVRVNFPSLISVLSVCASLA---SLDHGRQVHAQLVRCQFDVDVYVASVLITMYI 273
M E V + +L+SV C++ L G+QVHA +R + +++ ++ + L+ MY
Sbjct: 185 CMLDEDVEPSSFTLVSVALACSNFPMPEGLLMGKQVHAYGLR-KGELNSFIINTLVAMYG 243
Query: 274 KCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVG 333
K G+L K++ +F +D+V WN+++S Q ++L+ EM GV PD T+
Sbjct: 244 KMGKLASSKVLLGSFEGRDLVTWNTVLSSLCQNEQFLEALEYLREMVLEGVEPDGFTISS 303
Query: 334 VLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFE 393
VL ACS+ ++ G+E+ ++ + + +VD+ QV ++ + M F+
Sbjct: 304 VLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGCRVFDGM-FD 362
Query: 394 PDAIIWGSLL 403
+W +++
Sbjct: 363 RKIGLWNAMI 372
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 128/282 (45%), Gaps = 38/282 (13%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEK-----------NVVSWTVMLGGFIR 49
M +R + W AM+ GY + EA LF +M E VV V G F +
Sbjct: 360 MFDRKIGLWNAMITGYAQNEYDEEALLLFIEMEESAGLLANSTTMAGVVPACVRSGAFSK 419
Query: 50 DSRIDD--ARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMIS 107
I +R D +D Q ++ Y + G++D + IF +M +++++W T+I+
Sbjct: 420 KEAIHGFVVKRGLD----RDRFVQNALMDMYSRLGKIDIAKRIFGKMEDRDLVTWNTIIT 475
Query: 108 GYVNNNRIDVA-----------RKLFE----VMPEKNEVSWTAMLMGYTQCGRIQDAWEL 152
GYV + R + A RK E V + N ++ +L + E+
Sbjct: 476 GYVFSERHEDALLMLHKMQILERKASERASRVSLKPNSITLMTILPSCAALSALAKGKEI 535
Query: 153 FKAMPMKSVVASN-----SMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGY 207
A +K+ +A++ +++ + G +Q +R VFDQ+ ++ TW+ ++ Y G
Sbjct: 536 -HAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPIRNVITWNVIVMAYGMHGN 594
Query: 208 ELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQV 249
+ ID+ +M +GV+ N + ISV + C+ ++ G ++
Sbjct: 595 SQDAIDMLRMMMVQGVKPNEVTFISVFAACSHSGMVNEGLKI 636
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 117/239 (48%), Gaps = 9/239 (3%)
Query: 195 WSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLV 254
W +++ R E + + M G++ + + ++L A L +D G+Q+HA +
Sbjct: 61 WIDLLRSKVRSNLLREAVLTYIDMIVLGIKPDNFAFPALLKAVADLQDMDLGKQIHAHVY 120
Query: 255 RCQFDVD-VYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSL 313
+ + VD V VA+ L+ +Y KCG+ +FD + ++ V WNS+IS + E +L
Sbjct: 121 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 180
Query: 314 KVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHY--ACMV 371
+ F M V P TLV V ACS + EG + + + + L + + + +V
Sbjct: 181 EAFRCMLDEDVEPSSFTLVSVALACS-NFPMPEGLLMGKQVHAYGLRKGELNSFIINTLV 239
Query: 372 DLLGRAGQVEDAMKLIEAMPFEP-DAIIWGSLLGA-CRTHMKLDLAEVAAKKLLQ-LEP 427
+ G+ G++ + L+ + FE D + W ++L + C+ L+ E + +L+ +EP
Sbjct: 240 AMYGKMGKLASSKVLLGS--FEGRDLVTWNTVLSSLCQNEQFLEALEYLREMVLEGVEP 296
>gi|357116318|ref|XP_003559929.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Brachypodium distachyon]
Length = 646
Score = 400 bits (1028), Expect = e-108, Method: Compositional matrix adjust.
Identities = 202/521 (38%), Positives = 308/521 (59%), Gaps = 9/521 (1%)
Query: 88 REIFDEMPKKNVISWTTMISGYVNNNR----IDVARKLFEVMPEKNEVSWTAMLMGYTQC 143
R++FDEMP+K+V+SW T++ G + R + + R+++ + + + +++L + +
Sbjct: 127 RKVFDEMPEKDVVSWNTLVLGCAESGRHGEALGLVREMWRDGCKPDSFTLSSVLPIFAEG 186
Query: 144 GRIQDAWELFKAMPMKS----VVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMI 199
++ EL V +S+I + VFD + +D W+ M+
Sbjct: 187 ADVRRGMELHGFATRNGFHDDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDAILWNSML 246
Query: 200 KVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFD 259
+ G E + LF M G++ + S++ C +LASL G+Q+HA ++R FD
Sbjct: 247 AGCAQNGSVDEALGLFRRMLHSGIKPMPVTFSSLIPACGNLASLLLGKQLHAYVIRGGFD 306
Query: 260 VDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEM 319
+V+++S LI MY KCG + + IFD S DIV W ++I G+A +G ++L +F M
Sbjct: 307 GNVFISSSLIDMYCKCGNVSIARRIFDRIQSPDIVSWTAMIMGHALHGPAREALVLFDRM 366
Query: 320 FSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQ 379
+ P+ +T + VL+ACS+ G V +G + F SM Y + P EH+A + D LGR G+
Sbjct: 367 ELGNLKPNHITFLAVLTACSHAGLVDKGWKYFNSMSDHYGIVPSLEHHAALADTLGRPGK 426
Query: 380 VEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNI 439
+E+A I M +P A +W +LL AC+ H LAE AKK+ LEP++ G +I+LSN
Sbjct: 427 LEEAYNFISGMKIKPTASVWSTLLRACKVHKNTVLAEEVAKKIFDLEPRSMGSHIILSNT 486
Query: 440 YASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEK 499
Y+S GR+++ A LRK+MRK+ + K P CSWIEV+ K H+F D SHP + I+ L
Sbjct: 487 YSSSGRWNEAAHLRKSMRKKGMQKEPACSWIEVKNKQHVFVAHD-KSHPWYERIIDALNV 545
Query: 500 IGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRV 559
+ GY P++ V D++EE+K L HSEKLA+ +G++ P G IRVMKNLRV
Sbjct: 546 FSEQMVRQGYVPNTDDVFQDIEEEQKNSVLCGHSEKLAIVFGIISTPPGTTIRVMKNLRV 605
Query: 560 CGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
C DCH+ K ISK++GREI++RDANRFHHFKDG+CSC D+W
Sbjct: 606 CVDCHTVTKFISKIVGREIVMRDANRFHHFKDGICSCGDFW 646
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 115/231 (49%), Gaps = 10/231 (4%)
Query: 177 VQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSV 236
++ R VFD+M EKD +W+ ++ G E + L M ++G + + +L SVL +
Sbjct: 123 LESVRKVFDEMPEKDVVSWNTLVLGCAESGRHGEALGLVREMWRDGCKPDSFTLSSVLPI 182
Query: 237 CASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMW 296
A A + G ++H R F DV+V S LI MY C +FDN +D ++W
Sbjct: 183 FAEGADVRRGMELHGFATRNGFHDDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDAILW 242
Query: 297 NSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKS 356
NS+++G AQ G +++L +F M SG+ P VT ++ AC + G+++
Sbjct: 243 NSMLAGCAQNGSVDEALGLFRRMLHSGIKPMPVTFSSLIPACGNLASLLLGKQLH----- 297
Query: 357 KYLVEPKTEH----YACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
Y++ + + ++D+ + G V A ++ + + PD + W +++
Sbjct: 298 AYVIRGGFDGNVFISSSLIDMYCKCGNVSIARRIFDRIQ-SPDIVSWTAMI 347
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 119/265 (44%), Gaps = 22/265 (8%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM----PEKNVVSWTVMLGGFIRDSRIDDA 56
MPE++VVSW +V G E G EA L +M + + + + +L F + +
Sbjct: 133 MPEKDVVSWNTLVLGCAESGRHGEALGLVREMWRDGCKPDSFTLSSVLPIFAEGADVRRG 192
Query: 57 RRLFDMMPEK----DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
L DV ++++ Y R D ++FD +P ++ I W +M++G N
Sbjct: 193 MELHGFATRNGFHDDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDAILWNSMLAGCAQN 252
Query: 113 NRIDVARKLFEVMPEKN----EVSWTAMLMGYTQCGRI-------QDAWELFKAMPMKSV 161
+D A LF M V++++++ CG + Q + + +V
Sbjct: 253 GSVDEALGLFRRMLHSGIKPMPVTFSSLI---PACGNLASLLLGKQLHAYVIRGGFDGNV 309
Query: 162 VASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKE 221
S+S+I + G V AR +FD+++ D +W+ MI + G E + LF M+
Sbjct: 310 FISSSLIDMYCKCGNVSIARRIFDRIQSPDIVSWTAMIMGHALHGPAREALVLFDRMELG 369
Query: 222 GVRVNFPSLISVLSVCASLASLDHG 246
++ N + ++VL+ C+ +D G
Sbjct: 370 NLKPNHITFLAVLTACSHAGLVDKG 394
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 106/249 (42%), Gaps = 20/249 (8%)
Query: 194 TWSGMIKVYERKGYELEVIDLFTLMQKE----GVRVNFPSLISVLSVCASLASLDHGRQV 249
+W+ I+V +G I LF M+ SL L CA+L G +
Sbjct: 21 SWAHQIRVAASQGDFHHAIALFLRMRASDPAAACSSVLTSLPGALKSCAALGLRALGASL 80
Query: 250 HAQLVRCQFDVDVYVASVLITMYIKCGE--------------LVKGKLIFDNFASKDIVM 295
HA +R D + A+ L+ +Y K L + +FD KD+V
Sbjct: 81 HALALRSGAFADRFAANALLNLYCKLPAPPSHSPEMDGSAVVLESVRKVFDEMPEKDVVS 140
Query: 296 WNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMK 355
WN+++ G A+ G ++L + EM+ G PD TL VL + V+ G E+
Sbjct: 141 WNTLVLGCAESGRHGEALGLVREMWRDGCKPDSFTLSSVLPIFAEGADVRRGMEL-HGFA 199
Query: 356 SKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLA 415
++ + ++D+ + + ++K+ + +P DAI+W S+L C + +D A
Sbjct: 200 TRNGFHDDVFVGSSLIDMYANCTRTDYSVKVFDNLPVR-DAILWNSMLAGCAQNGSVDEA 258
Query: 416 EVAAKKLLQ 424
+++L
Sbjct: 259 LGLFRRMLH 267
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 98/223 (43%), Gaps = 26/223 (11%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFI------------ 48
+P R+ + W +M+ G + G + EA LF +M + V I
Sbjct: 234 LPVRDAILWNSMLAGCAQNGSVDEALGLFRRMLHSGIKPMPVTFSSLIPACGNLASLLLG 293
Query: 49 RDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISG 108
+ R FD +V ++++ YC+ G V R IFD + +++SWT MI G
Sbjct: 294 KQLHAYVIRGGFD----GNVFISSSLIDMYCKCGNVSIARRIFDRIQSPDIVSWTAMIMG 349
Query: 109 YVNNNRIDVARKLFEVMP----EKNEVSWTAMLMGYTQCGRIQDAWELFKAMP-----MK 159
+ + A LF+ M + N +++ A+L + G + W+ F +M +
Sbjct: 350 HALHGPAREALVLFDRMELGNLKPNHITFLAVLTACSHAGLVDKGWKYFNSMSDHYGIVP 409
Query: 160 SVVASNSMILGLGQNGEVQKARVVFDQMREKDDAT-WSGMIKV 201
S+ ++ LG+ G++++A M+ K A+ WS +++
Sbjct: 410 SLEHHAALADTLGRPGKLEEAYNFISGMKIKPTASVWSTLLRA 452
>gi|224060371|ref|XP_002300166.1| predicted protein [Populus trichocarpa]
gi|222847424|gb|EEE84971.1| predicted protein [Populus trichocarpa]
Length = 719
Score = 400 bits (1028), Expect = e-108, Method: Compositional matrix adjust.
Identities = 195/502 (38%), Positives = 309/502 (61%), Gaps = 6/502 (1%)
Query: 104 TMISGYVNNNRIDVARKLFEVMPEK-----NEVSWTAMLMGYTQCGRIQDAWELFKAMPM 158
+++ YV ++ A K+F+ PE+ + + W ++ G + G ++ A +LFKAMP
Sbjct: 219 SLVDMYVKVEKLGSAFKVFDESPERFDSGSSALLWNVLIKGCCKAGSMKKAVKLFKAMPK 278
Query: 159 KSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLM 218
K V+ +++I G +NG++ +A +FDQM EK+ +W+ M+ + R G + + +F+ M
Sbjct: 279 KENVSWSTLIDGFAKNGDMDRAMELFDQMPEKNVVSWTTMVDGFSRNGDSEKALSMFSKM 338
Query: 219 QKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGEL 278
+EGVR N +++S LS CA + L+ G ++H + + + + L+ MY KCG +
Sbjct: 339 LEEGVRPNAFTIVSALSACAKIGGLEAGLRIHKYIKDNGLHLTEALGTALVDMYAKCGNI 398
Query: 279 VKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSAC 338
+F K I W +I G+A +G E+++ F +M +G+ PD+V + +L+AC
Sbjct: 399 ESASEVFGETEQKSIRTWTVMIWGWAIHGHSEQAIACFKQMMFAGIKPDEVVFLALLTAC 458
Query: 339 SYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAII 398
++G+V G F+SM+ Y +EP +HY +VD+LGR+GQ+++A++ IE MP PD +I
Sbjct: 459 MHSGQVDIGLNFFDSMRLDYCIEPSMKHYTLIVDMLGRSGQLKEALRFIERMPMNPDFVI 518
Query: 399 WGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRK 458
WG+L ACR H K +A+ A KLL+LEP + G YI LSN YA+ G++ D +R M+
Sbjct: 519 WGALFCACRAHKKTKMAKFALNKLLKLEPTHTGNYIFLSNAYAALGQWEDAERVRVLMQN 578
Query: 459 RNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLH 518
R V K G S IEVE +VH F D + +++ E + G +++ GY P + +VLH
Sbjct: 579 RGVHKNSGWSCIEVEGQVHRFVSGDHDHKDSKAICLKLEEIMAGAVKQ-GYIPGTEWVLH 637
Query: 519 DVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREI 578
++++EEK L H EKLA+A+ L+ G+ IR++KNL+VCGDCHS +K SK+ REI
Sbjct: 638 NMEQEEKEDVLGSHGEKLALAFALICTSPGMTIRIVKNLQVCGDCHSLMKYASKISQREI 697
Query: 579 ILRDANRFHHFKDGLCSCRDYW 600
+LRD RFHHFKDG CSCRD+W
Sbjct: 698 MLRDMKRFHHFKDGSCSCRDHW 719
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/306 (22%), Positives = 147/306 (48%), Gaps = 17/306 (5%)
Query: 11 AMVRGYVEEGMITEAGTLFWQMPEK-----NVVSWTVMLGGFIRDSRIDDARRLFDMMPE 65
++V YV+ + A +F + PE+ + + W V++ G + + A +LF MP+
Sbjct: 219 SLVDMYVKVEKLGSAFKVFDESPERFDSGSSALLWNVLIKGCCKAGSMKKAVKLFKAMPK 278
Query: 66 KDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVM 125
K+ V+ + ++ G+ ++G +D E+FD+MP+KNV+SWTTM+ G+ N + A +F M
Sbjct: 279 KENVSWSTLIDGFAKNGDMDRAMELFDQMPEKNVVSWTTMVDGFSRNGDSEKALSMFSKM 338
Query: 126 PEK----NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGL----GQNGEV 177
E+ N + + L + G ++ + K + + + ++ L + G +
Sbjct: 339 LEEGVRPNAFTIVSALSACAKIGGLEAGLRIHKYIKDNGLHLTEALGTALVDMYAKCGNI 398
Query: 178 QKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVC 237
+ A VF + +K TW+ MI + G+ + I F M G++ + +++L+ C
Sbjct: 399 ESASEVFGETEQKSIRTWTVMIWGWAIHGHSEQAIACFKQMMFAGIKPDEVVFLALLTAC 458
Query: 238 ASLASLDHGRQVHAQLVRCQFDVDVYVA--SVLITMYIKCGELVKGKLIFDNFA-SKDIV 294
+D G + R + ++ + ++++ M + G+L + + + D V
Sbjct: 459 MHSGQVDIGLNFFDSM-RLDYCIEPSMKHYTLIVDMLGRSGQLKEALRFIERMPMNPDFV 517
Query: 295 MWNSII 300
+W ++
Sbjct: 518 IWGALF 523
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 101/199 (50%), Gaps = 13/199 (6%)
Query: 2 PER-----NVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDA 56
PER + + W +++G + G + +A LF MP+K VSW+ ++ GF ++ +D A
Sbjct: 241 PERFDSGSSALLWNVLIKGCCKAGSMKKAVKLFKAMPKKENVSWSTLIDGFAKNGDMDRA 300
Query: 57 RRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEM----PKKNVISWTTMISGYVNN 112
LFD MPEK+VV+ T MV G+ ++G ++ +F +M + N + + +S
Sbjct: 301 MELFDQMPEKNVVSWTTMVDGFSRNGDSEKALSMFSKMLEEGVRPNAFTIVSALSACAKI 360
Query: 113 NRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMI 168
++ ++ + + + E TA++ Y +CG I+ A E+F KS+ MI
Sbjct: 361 GGLEAGLRIHKYIKDNGLHLTEALGTALVDMYAKCGNIESASEVFGETEQKSIRTWTVMI 420
Query: 169 LGLGQNGEVQKARVVFDQM 187
G +G ++A F QM
Sbjct: 421 WGWAIHGHSEQAIACFKQM 439
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/323 (22%), Positives = 135/323 (41%), Gaps = 20/323 (6%)
Query: 94 MPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQD--AWE 151
+P N TT IS N LF E + +++ G ++ A
Sbjct: 45 IPSPNPPEITTTISKTSENKPKSSLSALFIPPTTPTEAHFISLIHGSKTILQLHQIHAQI 104
Query: 152 LFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEV 211
+ + S++ + +I + + VF+ + K+ T++ +I+ +
Sbjct: 105 IIHNLSSSSLITTQ-LISSSSLRKSINHSLAVFNHHKPKNLFTFNALIRGLTTNSHFFNA 163
Query: 212 IDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITM 271
I F LM + G++ + + VL A L S + G +H ++RC ++D +V L+ M
Sbjct: 164 IFHFRLMLRSGIKPDRLTYPFVLKSMAGLFSTELGMAIHCMILRCGIELDSFVRVSLVDM 223
Query: 272 YIKCGELVKGKLIFDNFASK-----DIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMP 326
Y+K +L +FD + ++WN +I G + G +K++K+F M
Sbjct: 224 YVKVEKLGSAFKVFDESPERFDSGSSALLWNVLIKGCCKAGSMKKAVKLFKAM----PKK 279
Query: 327 DDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKL 386
++V+ ++ + G + E+F+ M K +V + MVD R G E A+ +
Sbjct: 280 ENVSWSTLIDGFAKNGDMDRAMELFDQMPEKNVVS-----WTTMVDGFSRNGDSEKALSM 334
Query: 387 IEAMPFE---PDAIIWGSLLGAC 406
M E P+A S L AC
Sbjct: 335 FSKMLEEGVRPNAFTIVSALSAC 357
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 93/201 (46%), Gaps = 14/201 (6%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MP++ VSW+ ++ G+ + G + A LF QMPEKNVVSWT M+ GF R+ + A +F
Sbjct: 276 MPKKENVSWSTLIDGFAKNGDMDRAMELFDQMPEKNVVSWTTMVDGFSRNGDSEKALSMF 335
Query: 61 DMMPEKDVVAQTNMV---LGYCQD-GRVDEGREIFDEMPKKNVISW-----TTMISGYVN 111
M E+ V + L C G ++ G I + K N + T ++ Y
Sbjct: 336 SKMLEEGVRPNAFTIVSALSACAKIGGLEAGLRIHKYI-KDNGLHLTEALGTALVDMYAK 394
Query: 112 NNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGL 171
I+ A ++F +K+ +WT M+ G+ G + A FK M + + L L
Sbjct: 395 CGNIESASEVFGETEQKSIRTWTVMIWGWAIHGHSEQAIACFKQMMFAGIKPDEVVFLAL 454
Query: 172 ----GQNGEVQKARVVFDQMR 188
+G+V FD MR
Sbjct: 455 LTACMHSGQVDIGLNFFDSMR 475
>gi|225425100|ref|XP_002272744.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 622
Score = 400 bits (1028), Expect = e-108, Method: Compositional matrix adjust.
Identities = 222/597 (37%), Positives = 341/597 (57%), Gaps = 46/597 (7%)
Query: 49 RDSRIDDARRLFDMMPEKDVVAQ---TNMVLGYC---QDGRVDEGREIFDEMPKKNVISW 102
R S +++ R++ M + ++ + +L +C G + R +FD + + N W
Sbjct: 27 RCSNMEELRQIHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYARTVFDRIFRPNTFMW 86
Query: 103 TTMISGYVNNNRIDVARKLFEVM-------------------------PEKNEVSWTAML 137
TMI GY N+ + A L+ M E ++ +
Sbjct: 87 NTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSALEETQQIHAHIIK 146
Query: 138 MG--------------YTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVV 183
MG Y++ G I+ A LF + + V+ NSMI G + GE++ A +
Sbjct: 147 MGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMIDGYTKCGEIEMAYEI 206
Query: 184 FDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASL 243
F+ M E++ +W+ MI G E ++LF MQ G++++ +L+S L CA L L
Sbjct: 207 FNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQACADLGVL 266
Query: 244 DHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGY 303
D G+ +HA + + + ++D + VLI MY KCG+L + +F K + +W ++ISGY
Sbjct: 267 DQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSVWTAMISGY 326
Query: 304 AQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPK 363
A +G G ++L+ F +M ++GV P+ +T G+L+ACS+ G V E + +FESM+ + +P
Sbjct: 327 AIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEAKLLFESMERIHGFKPS 386
Query: 364 TEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLL 423
EHY CMVDLLGRAG +++A +LIE MP +P+A IWG+LL AC H L+L + K L+
Sbjct: 387 IEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGALLNACHIHGNLELGKQIGKILI 446
Query: 424 QLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRD 483
Q++P + G YI L++I+A+ G ++ A +R+ M+++ V K PGCS I V H F D
Sbjct: 447 QVDPGHGGRYIHLASIHAAAGEWNQAARVRRQMKEQGVSKLPGCSVISVNGTAHEFLAGD 506
Query: 484 CVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLV 543
SHP+ I MLE+I LRE GY P +L D++++EK ++ +HSEKLAV +GL+
Sbjct: 507 -ESHPQIKEIDHMLEQIVERLREEGYKPKLGDLLLDLEDKEKETAIHHHSEKLAVTFGLI 565
Query: 544 KLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
G+ IR++KNLRVC DCH+ IKLISKV REI++RD RFH FKDG C+C DYW
Sbjct: 566 STKPGMTIRIVKNLRVCEDCHTVIKLISKVYAREILMRDRTRFHLFKDGNCTCGDYW 622
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/365 (21%), Positives = 155/365 (42%), Gaps = 54/365 (14%)
Query: 5 NVVSWTAMVRGYV-----EEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRL 59
N W M+RGY EE ++ L+ +P N ++ +L S +++ +++
Sbjct: 82 NTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPH-NAYTFPFLLKACSSMSALEETQQI 140
Query: 60 FDM---MPEKDVVAQTNMVLG-YCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRI 115
M + TN +L Y + G + R +FD++ +++ +SW +MI GY I
Sbjct: 141 HAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMIDGYTKCGEI 200
Query: 116 DVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQN- 174
++A ++F MPE+N +SWT+M+ G G+ ++A LF M + N ++ Q
Sbjct: 201 EMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQAC 260
Query: 175 --------------------------------------GEVQKARVVFDQMREKDDATWS 196
G++++A VF +M EK + W+
Sbjct: 261 ADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSVWT 320
Query: 197 GMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRC 256
MI Y G E ++ F MQ GV N + +L+ C+ + + + + R
Sbjct: 321 AMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEAKLLFESMERI 380
Query: 257 Q-FDVDVYVASVLITMYIKCGELVKGKLIFDNFASK-DIVMWNSIISGYAQYG---LGEK 311
F + ++ + + G L + + + +N K + +W ++++ +G LG++
Sbjct: 381 HGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGALLNACHIHGNLELGKQ 440
Query: 312 SLKVF 316
K+
Sbjct: 441 IGKIL 445
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 123/270 (45%), Gaps = 20/270 (7%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDM 62
+R+ VSW +M+ GY + G I A +F MPE+N++SWT M+ G + + +A LF
Sbjct: 181 QRDTVSWNSMIDGYTKCGEIEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHR 240
Query: 63 MPEK----DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNV----ISWTTMISGYVNNNR 114
M D VA + + G +D+G+ I + K + I +I Y
Sbjct: 241 MQTAGIKLDNVALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGD 300
Query: 115 IDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGL--- 171
++ A ++F M EK WTAM+ GY GR ++A E F M V + G+
Sbjct: 301 LEEAIEVFRKMEEKGVSVWTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTA 360
Query: 172 -GQNGEVQKARVVFDQMR-----EKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRV 225
G V +A+++F+ M + + M+ + R G E +L M V+
Sbjct: 361 CSHAGLVHEAKLLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMP---VKP 417
Query: 226 NFPSLISVLSVCASLASLDHGRQVHAQLVR 255
N ++L+ C +L+ G+Q+ L++
Sbjct: 418 NAAIWGALLNACHIHGNLELGKQIGKILIQ 447
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 107/226 (47%), Gaps = 22/226 (9%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV----VSWTVMLGGFIRDSRIDDA 56
MPERN++SWT+M+ G V G EA LF +M + V+ L +D
Sbjct: 210 MPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQACADLGVLDQG 269
Query: 57 RRLFDMMPEKDVVAQTNMVLG------YCQDGRVDEGREIFDEMPKKNVISWTTMISGYV 110
+ + + + ++ + + +LG Y + G ++E E+F +M +K V WT MISGY
Sbjct: 270 KWIHAYIKKHEI--EIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSVWTAMISGYA 327
Query: 111 NNNRIDVARKLFEVMP----EKNEVSWTAMLMGYTQCGRIQDAWELFKAMP-----MKSV 161
+ R A + F M E N++++T +L + G + +A LF++M S+
Sbjct: 328 IHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEAKLLFESMERIHGFKPSI 387
Query: 162 VASNSMILGLGQNGEVQKARVVFDQMREKDDAT-WSGMIKVYERKG 206
M+ LG+ G +++A + + M K +A W ++ G
Sbjct: 388 EHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGALLNACHIHG 433
>gi|4455294|emb|CAB36829.1| putative protein [Arabidopsis thaliana]
gi|7268069|emb|CAB78407.1| putative protein [Arabidopsis thaliana]
Length = 1024
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 224/642 (34%), Positives = 348/642 (54%), Gaps = 58/642 (9%)
Query: 11 AMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVA 70
A++ Y + I A F + +NVV W VML + + ++ R+F M +++V
Sbjct: 389 ALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVP 448
Query: 71 -----------------------------QTNMVLG----------YCQDGRVDEGREIF 91
+TN L Y + G++D +I
Sbjct: 449 NQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDIL 508
Query: 92 DEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEK----------NEVSWTAMLMGYT 141
K+V+SWTTMI+GY N D A F M ++ N VS A L
Sbjct: 509 IRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALK 568
Query: 142 QCGRI--QDAWELFKA-MPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGM 198
+ +I Q F + +P + N+++ + G+++++ + F+Q D+ W+ +
Sbjct: 569 EGQQIHAQACVSGFSSDLPFQ-----NALVTLYSRCGKIEESYLAFEQTEAGDNIAWNAL 623
Query: 199 IKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQF 258
+ +++ G E + +F M +EG+ N + S + + A++ G+QVHA + + +
Sbjct: 624 VSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGY 683
Query: 259 DVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHE 318
D + V + LI+MY KCG + + F ++K+ V WN+II+ Y+++G G ++L F +
Sbjct: 684 DSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQ 743
Query: 319 MFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAG 378
M S V P+ VTLVGVLSACS+ G V +G FESM S+Y + PK EHY C+VD+L RAG
Sbjct: 744 MIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAG 803
Query: 379 QVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSN 438
+ A + I+ MP +PDA++W +LL AC H +++ E AA LL+LEP+++ Y+LLSN
Sbjct: 804 LLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSN 863
Query: 439 IYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLE 498
+YA ++ R+ M+++ V K PG SWIEV+ +H F D +HP I +
Sbjct: 864 LYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGD-QNHPLADEIHEYFQ 922
Query: 499 KIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLR 558
+ E GY D +L+++ E+K + HSEKLA+++GL+ LP VPI VMKNLR
Sbjct: 923 DLTKRASEIGYVQDCFSLLNELQHEQKDPIIFIHSEKLAISFGLLSLPATVPINVMKNLR 982
Query: 559 VCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
VC DCH+ IK +SKV REII+RDA RFHHF+ G CSC+DYW
Sbjct: 983 VCNDCHAWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1024
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 103/386 (26%), Positives = 176/386 (45%), Gaps = 16/386 (4%)
Query: 33 PEKNVVSWTVMLGGFIRDSRIDDARRLFDMMP----EKDVVAQTNMVLGYCQDGRVDEGR 88
P + W ++ G + +D+ R+L + + + + Y G +
Sbjct: 42 PNHQTLKW-LLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAF 100
Query: 89 EIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGR--- 145
++FDEMP++ + +W MI + N I LF M +N G + R
Sbjct: 101 KVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGS 160
Query: 146 -IQDAWELFKAMPM-----KSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMI 199
D E A + S V N +I +NG V AR VFD +R KD ++W MI
Sbjct: 161 VAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMI 220
Query: 200 KVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFD 259
+ E E I LF M G+ + SVLS C + SL+ G Q+H +++ F
Sbjct: 221 SGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFS 280
Query: 260 VDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEM 319
D YV + L+++Y G L+ + IF N + +D V +N++I+G +Q G GEK++++F M
Sbjct: 281 SDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRM 340
Query: 320 FSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQ 379
G+ PD TL ++ ACS G + G+++ + +K + +++L +
Sbjct: 341 HLDGLEPDSNTLASLVVACSADGTLFRGQQL-HAYTTKLGFASNNKIEGALLNLYAKCAD 399
Query: 380 VEDAMKLIEAMPFEPDAIIWGSLLGA 405
+E A+ E + ++W +L A
Sbjct: 400 IETALDYFLETEVE-NVVLWNVMLVA 424
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 100/449 (22%), Positives = 200/449 (44%), Gaps = 37/449 (8%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDD----- 55
MPER + +W M++ +I E LF +M +NV G + R
Sbjct: 106 MPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDV 165
Query: 56 -----ARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYV 110
AR L+ + + VV + L Y ++G VD R +FD + K+ SW MISG
Sbjct: 166 VEQIHARILYQGLRDSTVVCNPLIDL-YSRNGFVDLARRVFDGLRLKDHSSWVAMISGLS 224
Query: 111 NNNRIDVARKLF------EVMPEKNEVSWTAMLMGYTQCGRIQ--DAWELFKAMPMKSVV 162
N A +LF +MP +++++L + C +I+ + E + +K
Sbjct: 225 KNECEAEAIRLFCDMYVLGIMP--TPYAFSSVL---SACKKIESLEIGEQLHGLVLKLGF 279
Query: 163 AS-----NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTL 217
+S N+++ G + A +F M ++D T++ +I + GY + ++LF
Sbjct: 280 SSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKR 339
Query: 218 MQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGE 277
M +G+ + +L S++ C++ +L G+Q+HA + F + + L+ +Y KC +
Sbjct: 340 MHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCAD 399
Query: 278 LVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSA 337
+ F +++V+WN ++ Y S ++F +M ++P+ T +L
Sbjct: 400 IETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKT 459
Query: 338 CSYTGKVKEGREIFES-MKSKYLVEPKTEHYAC--MVDLLGRAGQVEDAMKLIEAMPFEP 394
C G ++ G +I +K+ + + Y C ++D+ + G+++ A ++
Sbjct: 460 CIRLGDLELGEQIHSQIIKTNFQLNA----YVCSVLIDMYAKLGKLDTAWDILIRFA-GK 514
Query: 395 DAIIWGSLLGACRTHMKLDLAEVAAKKLL 423
D + W +++ + D A +++L
Sbjct: 515 DVVSWTTMIAGYTQYNFDDKALTTFRQML 543
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 120/260 (46%), Gaps = 18/260 (6%)
Query: 4 RNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMM 63
++VVSWT M+ GY + +A T F QM ++ + S V L + A + +
Sbjct: 514 KDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQI 573
Query: 64 PEKDVVA--------QTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRI 115
+ V+ Q +V Y + G+++E F++ + I+W ++SG+ +
Sbjct: 574 HAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNN 633
Query: 116 DVARKLFEVMP----EKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVAS-----NS 166
+ A ++F M + N ++ + + ++ ++ ++ A+ K+ S N+
Sbjct: 634 EEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQV-HAVITKTGYDSETEVCNA 692
Query: 167 MILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVN 226
+I + G + A F ++ K++ +W+ +I Y + G+ E +D F M VR N
Sbjct: 693 LISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPN 752
Query: 227 FPSLISVLSVCASLASLDHG 246
+L+ VLS C+ + +D G
Sbjct: 753 HVTLVGVLSACSHIGLVDKG 772
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 86/177 (48%), Gaps = 7/177 (3%)
Query: 218 MQKEGVRVNFPSLISVLSVC-ASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCG 276
++ G+R N +L +L C + SLD GR++H+Q+++ D + ++ L Y+ G
Sbjct: 35 VENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKG 94
Query: 277 ELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLS 336
+L +FD + I WN +I A L + +F M S V P++ T GVL
Sbjct: 95 DLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLE 154
Query: 337 ACSYTGKVKEGREIFESMKSKYLVEP-KTEHYAC--MVDLLGRAGQVEDAMKLIEAM 390
AC G V ++ E + ++ L + + C ++DL R G V+ A ++ + +
Sbjct: 155 ACR-GGSV--AFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGL 208
>gi|449484291|ref|XP_004156841.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g14050, mitochondrial-like [Cucumis sativus]
Length = 611
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 214/599 (35%), Positives = 343/599 (57%), Gaps = 49/599 (8%)
Query: 16 YVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMM----------PE 65
Y + G+I +A LF +MP ++ VSW +L ++ RR M+ P+
Sbjct: 48 YGKCGLIPQALQLFDEMPNRDHVSWASILTA---HNKALIPRRTLSMLNTMFTHDGLQPD 104
Query: 66 KDVVA---QTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLF 122
V A + LGY + G+ R + V+ +++I Y + D AR +F
Sbjct: 105 HFVFACIVRACSSLGYLRLGKQVHARFMLSXFCDDEVVK-SSLIDMYTKCGQPDEARAVF 163
Query: 123 EVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARV 182
+ + KN VSWT+M+ GY + GR +A +LF P++++ + ++I GL Q+
Sbjct: 164 DSILFKNSVSWTSMISGYARSGRKCEAMDLFLQAPVRNLFSWTALISGLIQS-------- 215
Query: 183 VFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLI-SVLSVCASLA 241
G+ + LF M++EG+ + P ++ SV+ CA+LA
Sbjct: 216 -----------------------GHGIYSFSLFNEMRREGIDIVDPLVLSSVVGGCANLA 252
Query: 242 SLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIIS 301
L+ G+Q+H ++ F+ +++++ L+ MY KC +++ K IF KD++ W SII
Sbjct: 253 LLELGKQIHGLVIALGFESCLFISNALVDMYAKCSDILAAKDIFYRMPRKDVISWTSIIV 312
Query: 302 GYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVE 361
G AQ+G E++L ++ EM S + P++VT VG+L ACS+ G V GRE+F SM + Y +
Sbjct: 313 GTAQHGKAEEALTLYDEMVLSRIKPNEVTFVGLLYACSHAGLVSRGRELFRSMTTDYSIN 372
Query: 362 PKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKK 421
P +HY C++DLL R+G +++A L++ +PF+PD W SLL AC H L++ A +
Sbjct: 373 PSLQHYTCLLDLLSRSGHLDEAENLLDKIPFKPDEPTWASLLSACMRHNNLEMGVRIADR 432
Query: 422 LLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTG 481
+L L+P++ YILLSN+YA + V+++RK M V K PG S I+ K +F
Sbjct: 433 VLDLKPEDPSTYILLSNVYAGAEMWGSVSKVRKLMSSMEVRKEPGYSSIDFGKDSQVFHA 492
Query: 482 RDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYG 541
+ HP I +L+ + +R+ GY P++SFVL+D++++EK L +HSE+LAVAYG
Sbjct: 493 GESCDHPMKNEICNLLKDLDAEMRKRGYVPNTSFVLYDIEQQEKEKQLFWHSERLAVAYG 552
Query: 542 LVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
L+K G IR++KNLR+CGDCH+ +K IS ++ REI++RDA R+HHFK+G CSC D+W
Sbjct: 553 LLKAVPGTIIRIVKNLRICGDCHNVLKFISDIVKREIMVRDATRYHHFKEGKCSCNDFW 611
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 94/413 (22%), Positives = 176/413 (42%), Gaps = 59/413 (14%)
Query: 1 MPERNVVSW----TAMVRGYVEEGMITEAGTLFWQ---MPEKNVVSWTVMLG---GFIRD 50
MP R+ VSW TA + + ++ T+F P+ V + V G++R
Sbjct: 64 MPNRDHVSWASILTAHNKALIPRRTLSMLNTMFTHDGLQPDHFVFACIVRACSSLGYLRL 123
Query: 51 SRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYV 110
+ AR + + +VV +++++ Y + G+ DE R +FD + KN +SWT+MISGY
Sbjct: 124 GKQVHARFMLSXFCDDEVV-KSSLIDMYTKCGQPDEARAVFDSILFKNSVSWTSMISGYA 182
Query: 111 NNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMP-----------MK 159
+ R A LF P +N SWTA++ G Q G ++ LF M +
Sbjct: 183 RSGRKCEAMDLFLQAPVRNLFSWTALISGLIQSGHGIYSFSLFNEMRREGIDIVDPLVLS 242
Query: 160 SVVA--SNSMILGLGQN---------------------------GEVQKARVVFDQMREK 190
SVV +N +L LG+ ++ A+ +F +M K
Sbjct: 243 SVVGGCANLALLELGKQIHGLVIALGFESCLFISNALVDMYAKCSDILAAKDIFYRMPRK 302
Query: 191 DDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVH 250
D +W+ +I + G E + L+ M ++ N + + +L C+ + GR++
Sbjct: 303 DVISWTSIIVGTAQHGKAEEALTLYDEMVLSRIKPNEVTFVGLLYACSHAGLVSRGRELF 362
Query: 251 AQLVR-CQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASK-DIVMWNSIISGYAQYGL 308
+ + + + L+ + + G L + + + D K D W S++S ++
Sbjct: 363 RSMTTDYSINPSLQHYTCLLDLLSRSGHLDEAENLLDKIPFKPDEPTWASLLSACMRHNN 422
Query: 309 GEKSLKVFHEMFSSGVMPDD----VTLVGVLSACSYTGKVKEGREIFESMKSK 357
E +++ + + P+D + L V + G V + R++ SM+ +
Sbjct: 423 LEMGVRIADRVLD--LKPEDPSTYILLSNVYAGAEMWGSVSKVRKLMSSMEVR 473
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 136/313 (43%), Gaps = 42/313 (13%)
Query: 143 CGRIQDAW-------ELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATW 195
C R Q A ++ KA KS + SN+++ G+ G + +A +FD+M +D +W
Sbjct: 13 CARRQSASAAGELHSQIIKAGFDKSSLLSNTLLDVYGKCGLIPQALQLFDEMPNRDHVSW 72
Query: 196 SGMIKVYERKGYELEVIDLF-TLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLV 254
+ ++ + + + + T+ +G++ + ++ C+SL L G+QVHA+ +
Sbjct: 73 ASILTAHNKALIPRRTLSMLNTMFTHDGLQPDHFVFACIVRACSSLGYLRLGKQVHARFM 132
Query: 255 RCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYA---------- 304
F D V S LI MY KCG+ + + +FD+ K+ V W S+ISGYA
Sbjct: 133 LSXFCDDEVVKSSLIDMYTKCGQPDEARAVFDSILFKNSVSWTSMISGYARSGRKCEAMD 192
Query: 305 ---------------------QYGLGEKSLKVFHEMFSSGV-MPDDVTLVGVLSACSYTG 342
Q G G S +F+EM G+ + D + L V+ C+
Sbjct: 193 LFLQAPVRNLFSWTALISGLIQSGHGIYSFSLFNEMRREGIDIVDPLVLSSVVGGCANLA 252
Query: 343 KVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSL 402
++ G++I + E +VD+ + + A + MP D I W S+
Sbjct: 253 LLELGKQI-HGLVIALGFESCLFISNALVDMYAKCSDILAAKDIFYRMP-RKDVISWTSI 310
Query: 403 LGACRTHMKLDLA 415
+ H K + A
Sbjct: 311 IVGTAQHGKAEEA 323
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 95/182 (52%), Gaps = 3/182 (1%)
Query: 225 VNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLI 284
+N + L +CA S ++H+Q+++ FD +++ L+ +Y KCG + + +
Sbjct: 1 MNISHFLHQLQLCARRQSASAAGELHSQIIKAGFDKSSLLSNTLLDVYGKCGLIPQALQL 60
Query: 285 FDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFS-SGVMPDDVTLVGVLSACSYTGK 343
FD ++D V W SI++ + + + ++L + + MF+ G+ PD ++ ACS G
Sbjct: 61 FDEMPNRDHVSWASILTAHNKALIPRRTLSMLNTMFTHDGLQPDHFVFACIVRACSSLGY 120
Query: 344 VKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
++ G+++ + + + ++D+ + GQ ++A + +++ F+ +++ W S++
Sbjct: 121 LRLGKQVHARFMLSXFCDDEVVK-SSLIDMYTKCGQPDEARAVFDSILFK-NSVSWTSMI 178
Query: 404 GA 405
Sbjct: 179 SG 180
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 91/209 (43%), Gaps = 24/209 (11%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMP----E 65
A+V Y + I A +F++MP K+V+SWT ++ G + + ++A L+D M +
Sbjct: 277 NALVDMYAKCSDILAAKDIFYRMPRKDVISWTSIIVGTAQHGKAEEALTLYDEMVLSRIK 336
Query: 66 KDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVIS-----WTTMISGYVNNNRIDVARK 120
+ V ++ G V GRE+F M I+ +T ++ + +D A
Sbjct: 337 PNEVTFVGLLYACSHAGLVSRGRELFRSMTTDYSINPSLQHYTCLLDLLSRSGHLDEAEN 396
Query: 121 LFEVMPEK-NEVSWTAML----------MGYTQCGRIQDAWELFKAMPMKSVVASNSMIL 169
L + +P K +E +W ++L MG R+ D L P ++ SN +
Sbjct: 397 LLDKIPFKPDEPTWASLLSACMRHNNLEMGVRIADRVLD---LKPEDPSTYILLSN-VYA 452
Query: 170 GLGQNGEVQKARVVFDQMREKDDATWSGM 198
G G V K R + M + + +S +
Sbjct: 453 GAEMWGSVSKVRKLMSSMEVRKEPGYSSI 481
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/186 (20%), Positives = 85/186 (45%), Gaps = 16/186 (8%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMP----EKNVVSWTVMLGGFIRDSRIDDA 56
MP ++V+SWT+++ G + G EA TL+ +M + N V++ +L +
Sbjct: 299 MPRKDVISWTSIIVGTAQHGKAEEALTLYDEMVLSRIKPNEVTFVGLLYACSHAGLVSRG 358
Query: 57 RRLFDMMP-----EKDVVAQTNMVLGYCQDGRVDEGREIFDEMP-KKNVISWTTMISGYV 110
R LF M + T ++ + G +DE + D++P K + +W +++S +
Sbjct: 359 RELFRSMTTDYSINPSLQHYTCLLDLLSRSGHLDEAENLLDKIPFKPDEPTWASLLSACM 418
Query: 111 NNNRID----VARKLFEVMPE--KNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVAS 164
+N ++ +A ++ ++ PE + + + G G + +L +M ++
Sbjct: 419 RHNNLEMGVRIADRVLDLKPEDPSTYILLSNVYAGAEMWGSVSKVRKLMSSMEVRKEPGY 478
Query: 165 NSMILG 170
+S+ G
Sbjct: 479 SSIDFG 484
>gi|296085345|emb|CBI29077.3| unnamed protein product [Vitis vinifera]
Length = 671
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 206/468 (44%), Positives = 299/468 (63%), Gaps = 2/468 (0%)
Query: 134 TAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDA 193
++++ Y + A +LF + VV+ N+MI G ++ E+ AR+VFD+M +D
Sbjct: 205 SSLIHLYANGKDLGAAKQLFNLCSARDVVSWNAMIDGYVKHVEMGHARMVFDRMVCRDVI 264
Query: 194 TWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQL 253
+W+ MI Y G E + LF M+ GV+ +++S+LS CA L +LD G +H +
Sbjct: 265 SWNTMINGYAICGKPNEALALFDQMRAVGVKPTEATVVSLLSACAHLGALDKGLHLHTYI 324
Query: 254 VRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSL 313
+ +V+ V + L+ MY KCG++ +F+ SKD++ WN+II+G A +G +++
Sbjct: 325 NDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIHGNVKEAQ 384
Query: 314 KVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDL 373
++F EM +GV P+D+T V +LSACS+ G V EG+++ + M S Y +EPK EHY C++DL
Sbjct: 385 QLFKEMKEAGVEPNDITFVAILSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYGCVIDL 444
Query: 374 LGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPY 433
L RAG +E+AM+LI MP EP+ G+LLG CR H +L E+ K+L+ L+P ++G Y
Sbjct: 445 LARAGFLEEAMELIGTMPMEPNPSALGALLGGCRIHGNFELGEMVGKRLINLQPCHSGRY 504
Query: 434 ILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMI 493
ILLSNIYA+ ++ D ++R M+ + K PG S IE++ VH F D SHPE I
Sbjct: 505 ILLSNIYAAAKKWDDARKVRNLMKVNGISKVPGVSVIELKGMVHRFVAGDW-SHPESNKI 563
Query: 494 MRMLEKIGGLLREA-GYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIR 552
L +I L+ A GY D+ VL D++EE+K H+L HSEKLA+AYGL+ L IR
Sbjct: 564 YEKLNEIHTRLKSAIGYSADTGNVLLDMEEEDKEHALAVHSEKLAIAYGLLHLDSKEAIR 623
Query: 553 VMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
++KNLRVC DCH IKLISKV GREII+RD NRFHHF+DG CSC D+W
Sbjct: 624 IVKNLRVCRDCHHVIKLISKVYGREIIVRDRNRFHHFEDGECSCLDFW 671
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 119/259 (45%), Gaps = 61/259 (23%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVV 69
++++ Y + A LF ++VVSW M+ G+++ + AR +FD M +DV+
Sbjct: 205 SSLIHLYANGKDLGAAKQLFNLCSARDVVSWNAMIDGYVKHVEMGHARMVFDRMVCRDVI 264
Query: 70 AQTNMVLGYCQDGRVDEGREIFDEM-------PKKNVISWTTM------------ISGYV 110
+ M+ GY G+ +E +FD+M + V+S + + Y+
Sbjct: 265 SWNTMINGYAICGKPNEALALFDQMRAVGVKPTEATVVSLLSACAHLGALDKGLHLHTYI 324
Query: 111 NNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILG 170
N+NRI+V N + TA++ Y +CG+I A ++F AM K V+A N++I G
Sbjct: 325 NDNRIEV-----------NSIVGTALVDMYAKCGKISLATQVFNAMESKDVLAWNTIIAG 373
Query: 171 LGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSL 230
+ +G V++A+ +F +M+E GV N +
Sbjct: 374 MAIHGNVKEAQQLFKEMKEA-------------------------------GVEPNDITF 402
Query: 231 ISVLSVCASLASLDHGRQV 249
+++LS C+ +D G+++
Sbjct: 403 VAILSACSHAGMVDEGQKL 421
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/291 (21%), Positives = 131/291 (45%), Gaps = 35/291 (12%)
Query: 180 ARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCAS 239
A+ +F ++ + ++ +I+ LE + L+ M + G++ + + V+ C
Sbjct: 119 AKTIFHHLQNPPPSLYNSLIRALSSSKTPLEALPLYHTMLQSGLKPDHMTYPFVIKACNE 178
Query: 240 LASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSI 299
+ G VH +V+ F+ D Y+ S LI +Y +L K +F+ +++D+V WN++
Sbjct: 179 SSVTWFGLLVHTHVVKSGFECDSYIVSSLIHLYANGKDLGAAKQLFNLCSARDVVSWNAM 238
Query: 300 ISGYAQY-------------------------------GLGEKSLKVFHEMFSSGVMPDD 328
I GY ++ G ++L +F +M + GV P +
Sbjct: 239 IDGYVKHVEMGHARMVFDRMVCRDVISWNTMINGYAICGKPNEALALFDQMRAVGVKPTE 298
Query: 329 VTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIE 388
T+V +LSAC++ G + +G + + +E + +VD+ + G++ A ++
Sbjct: 299 ATVVSLLSACAHLGALDKGLHLHTYINDNR-IEVNSIVGTALVDMYAKCGKISLATQVFN 357
Query: 389 AMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQ--LEPKNAGPYILLS 437
AM D + W +++ H + A+ K++ + +EP + +LS
Sbjct: 358 AME-SKDVLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDITFVAILS 407
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 73/160 (45%), Gaps = 14/160 (8%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDM 62
E N + TA+V Y + G I+ A +F M K+V++W ++ G + +A++LF
Sbjct: 330 EVNSIVGTALVDMYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIHGNVKEAQQLFKE 389
Query: 63 MPEKDVVAQTNM---VLGYC-QDGRVDEGREIFDEMP-----KKNVISWTTMISGYVNNN 113
M E V +L C G VDEG+++ D M + V + +I
Sbjct: 390 MKEAGVEPNDITFVAILSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYGCVIDLLARAG 449
Query: 114 RIDVARKLFEVMP-EKNEVSWTAMLMGYTQCGRIQDAWEL 152
++ A +L MP E N + A+L G C RI +EL
Sbjct: 450 FLEEAMELIGTMPMEPNPSALGALLGG---C-RIHGNFEL 485
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 105/254 (41%), Gaps = 33/254 (12%)
Query: 225 VNFPSLISVLSVCASLASLDHGRQVHAQLV---RCQFDVDVYVASVLITMYIKCGELVKG 281
N PS +LS+ +L H +QVHAQ++ F + + ++ + L
Sbjct: 62 TNPPSNPQILSLFNPCKTLRHLKQVHAQIITHHNSPFQLSALASLSALSPFPTF--LAYA 119
Query: 282 KLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACS-- 339
K IF + + ++NS+I + ++L ++H M SG+ PD +T V+ AC+
Sbjct: 120 KTIFHHLQNPPPSLYNSLIRALSSSKTPLEALPLYHTMLQSGLKPDHMTYPFVIKACNES 179
Query: 340 ---------YTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAM 390
+T VK G E Y+V YA DL G + L A
Sbjct: 180 SVTWFGLLVHTHVVKSGFEC-----DSYIVSSLIHLYANGKDL----GAAKQLFNLCSAR 230
Query: 391 PFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVA 450
D + W +++ H+++ A + +++ ++ + + N YA G+ ++
Sbjct: 231 ----DVVSWNAMIDGYVKHVEMGHARMVFDRMVC---RDVISWNTMINGYAICGKPNEAL 283
Query: 451 ELRKNMRKRNVIKP 464
L MR V KP
Sbjct: 284 ALFDQMRAVGV-KP 296
>gi|225442928|ref|XP_002265258.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Vitis vinifera]
Length = 703
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 217/645 (33%), Positives = 352/645 (54%), Gaps = 51/645 (7%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMP 64
N+V +++ Y + I A LF M ++NVVSW ++ G+ + + + RLF M
Sbjct: 61 NIVQVNSLINLYAKCDQIMVARILFDGMRKRNVVSWGALMAGYFHNGLVLEVLRLFKTMI 120
Query: 65 EKDVVAQTN----MVLGYCQD-GRVDEGRE------------------------------ 89
D + ++ C D G+V EG +
Sbjct: 121 SVDYMRPNEYIFATIISSCSDSGQVVEGWQCHGYALKSGLVFHQYVKNALICMYSRRSDV 180
Query: 90 -----IFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSW--TAMLMGYTQ 142
++ E+P +V S+ +I+G + N A ++ + M ++ + W + +
Sbjct: 181 KGAMSVWYEVPGLDVFSYNIIINGLLENGYPSEALEVLDRMVDEC-IVWDNVTYVTAFGL 239
Query: 143 CGRIQDA-------WELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATW 195
C ++D +F+ S+++I G+ G + AR VF++++ K+ +W
Sbjct: 240 CSHLKDLRLGLQVHCRMFRTGAEYDSFVSSAIIDMYGKCGNILNARKVFNRLQTKNVVSW 299
Query: 196 SGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVR 255
+ ++ Y + G E ++ F M+ +G+ N + +L+ CA +++L HG+ +H ++ +
Sbjct: 300 TAILAAYSQNGCFEEALNFFPEMEVDGLLPNEYTFAVLLNSCAGISALGHGKLLHTRIKK 359
Query: 256 CQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKV 315
F+ + V + LI MY K G + +F +D + W+++I G + +GLG ++L V
Sbjct: 360 SGFEDHIIVGNALINMYSKSGSIEAAHKVFLEMICRDSITWSAMICGLSHHGLGREALVV 419
Query: 316 FHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLG 375
F EM ++ P VT VGVLSAC++ G V+EG + + +EP EHY C+V LL
Sbjct: 420 FQEMLAAKECPHYVTFVGVLSACAHLGSVQEGFYYLNQLMKQTGIEPGVEHYTCIVGLLC 479
Query: 376 RAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYIL 435
+AG++++A +++ P + D + W +LL AC H L + A+ +LQ++P + G YIL
Sbjct: 480 KAGRLDEAENFMKSTPVKWDVVAWRTLLSACHVHQNYGLGKKVAELVLQMDPGDVGTYIL 539
Query: 436 LSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMR 495
LSN+YA R+ V ++RK MR+RNV K PG SWIE+ +H+F +HPE I
Sbjct: 540 LSNMYAKAKRWDGVVKIRKLMRERNVKKEPGASWIEIRNSIHVFVSEG-KTHPESNQIYE 598
Query: 496 MLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMK 555
++++ ++R GY PD + V HDV++E+K + YHSEKLA+AYGL+K P G PIRV+K
Sbjct: 599 KVQELLTMIRPMGYVPDIAAVFHDVEDEQKREYVSYHSEKLAIAYGLMKTPSGAPIRVIK 658
Query: 556 NLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
NLR+C DCHSA+KLISKV R II+RDANRFH F DG CSC DYW
Sbjct: 659 NLRMCVDCHSAVKLISKVTNRMIIVRDANRFHCFGDGGCSCADYW 703
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 86/372 (23%), Positives = 182/372 (48%), Gaps = 12/372 (3%)
Query: 48 IRDSRIDDARRLFDMMPEKDVVAQTNMVLG-YCQDGRVDEGREIFDEMPKKNVISWTTMI 106
++ ++ A + KD + Q N ++ Y + ++ R +FD M K+NV+SW ++
Sbjct: 41 LKFGKMIHAHLIITNQATKDNIVQVNSLINLYAKCDQIMVARILFDGMRKRNVVSWGALM 100
Query: 107 SGYVNNNRIDVARKLFEVMPE-----KNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSV 161
+GY +N + +LF+ M NE + ++ + G++ + W+ +
Sbjct: 101 AGYFHNGLVLEVLRLFKTMISVDYMRPNEYIFATIISSCSDSGQVVEGWQCHGYALKSGL 160
Query: 162 V----ASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTL 217
V N++I + +V+ A V+ ++ D +++ +I GY E +++
Sbjct: 161 VFHQYVKNALICMYSRRSDVKGAMSVWYEVPGLDVFSYNIIINGLLENGYPSEALEVLDR 220
Query: 218 MQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGE 277
M E + + + ++ +C+ L L G QVH ++ R + D +V+S +I MY KCG
Sbjct: 221 MVDECIVWDNVTYVTAFGLCSHLKDLRLGLQVHCRMFRTGAEYDSFVSSAIIDMYGKCGN 280
Query: 278 LVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSA 337
++ + +F+ +K++V W +I++ Y+Q G E++L F EM G++P++ T +L++
Sbjct: 281 ILNARKVFNRLQTKNVVSWTAILAAYSQNGCFEEALNFFPEMEVDGLLPNEYTFAVLLNS 340
Query: 338 CSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAI 397
C+ + G+ + +K K E ++++ ++G +E A K+ M D+I
Sbjct: 341 CAGISALGHGKLLHTRIK-KSGFEDHIIVGNALINMYSKSGSIEAAHKVFLEMICR-DSI 398
Query: 398 IWGSLLGACRTH 409
W +++ H
Sbjct: 399 TWSAMICGLSHH 410
>gi|42566761|ref|NP_193101.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635639|sp|Q9SVP7.2|PP307_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g13650
gi|332657909|gb|AEE83309.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1064
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 224/642 (34%), Positives = 348/642 (54%), Gaps = 58/642 (9%)
Query: 11 AMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVA 70
A++ Y + I A F + +NVV W VML + + ++ R+F M +++V
Sbjct: 429 ALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVP 488
Query: 71 -----------------------------QTNMVLG----------YCQDGRVDEGREIF 91
+TN L Y + G++D +I
Sbjct: 489 NQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDIL 548
Query: 92 DEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEK----------NEVSWTAMLMGYT 141
K+V+SWTTMI+GY N D A F M ++ N VS A L
Sbjct: 549 IRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALK 608
Query: 142 QCGRI--QDAWELFKA-MPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGM 198
+ +I Q F + +P + N+++ + G+++++ + F+Q D+ W+ +
Sbjct: 609 EGQQIHAQACVSGFSSDLPFQ-----NALVTLYSRCGKIEESYLAFEQTEAGDNIAWNAL 663
Query: 199 IKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQF 258
+ +++ G E + +F M +EG+ N + S + + A++ G+QVHA + + +
Sbjct: 664 VSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGY 723
Query: 259 DVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHE 318
D + V + LI+MY KCG + + F ++K+ V WN+II+ Y+++G G ++L F +
Sbjct: 724 DSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQ 783
Query: 319 MFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAG 378
M S V P+ VTLVGVLSACS+ G V +G FESM S+Y + PK EHY C+VD+L RAG
Sbjct: 784 MIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAG 843
Query: 379 QVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSN 438
+ A + I+ MP +PDA++W +LL AC H +++ E AA LL+LEP+++ Y+LLSN
Sbjct: 844 LLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSN 903
Query: 439 IYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLE 498
+YA ++ R+ M+++ V K PG SWIEV+ +H F D +HP I +
Sbjct: 904 LYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGD-QNHPLADEIHEYFQ 962
Query: 499 KIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLR 558
+ E GY D +L+++ E+K + HSEKLA+++GL+ LP VPI VMKNLR
Sbjct: 963 DLTKRASEIGYVQDCFSLLNELQHEQKDPIIFIHSEKLAISFGLLSLPATVPINVMKNLR 1022
Query: 559 VCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
VC DCH+ IK +SKV REII+RDA RFHHF+ G CSC+DYW
Sbjct: 1023 VCNDCHAWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1064
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 103/386 (26%), Positives = 176/386 (45%), Gaps = 16/386 (4%)
Query: 33 PEKNVVSWTVMLGGFIRDSRIDDARRLFDMMP----EKDVVAQTNMVLGYCQDGRVDEGR 88
P + W ++ G + +D+ R+L + + + + Y G +
Sbjct: 82 PNHQTLKW-LLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAF 140
Query: 89 EIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGR--- 145
++FDEMP++ + +W MI + N I LF M +N G + R
Sbjct: 141 KVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGS 200
Query: 146 -IQDAWELFKAMPM-----KSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMI 199
D E A + S V N +I +NG V AR VFD +R KD ++W MI
Sbjct: 201 VAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMI 260
Query: 200 KVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFD 259
+ E E I LF M G+ + SVLS C + SL+ G Q+H +++ F
Sbjct: 261 SGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFS 320
Query: 260 VDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEM 319
D YV + L+++Y G L+ + IF N + +D V +N++I+G +Q G GEK++++F M
Sbjct: 321 SDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRM 380
Query: 320 FSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQ 379
G+ PD TL ++ ACS G + G+++ + +K + +++L +
Sbjct: 381 HLDGLEPDSNTLASLVVACSADGTLFRGQQL-HAYTTKLGFASNNKIEGALLNLYAKCAD 439
Query: 380 VEDAMKLIEAMPFEPDAIIWGSLLGA 405
+E A+ E + ++W +L A
Sbjct: 440 IETALDYFLETEVE-NVVLWNVMLVA 464
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 100/449 (22%), Positives = 200/449 (44%), Gaps = 37/449 (8%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDD----- 55
MPER + +W M++ +I E LF +M +NV G + R
Sbjct: 146 MPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDV 205
Query: 56 -----ARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYV 110
AR L+ + + VV + L Y ++G VD R +FD + K+ SW MISG
Sbjct: 206 VEQIHARILYQGLRDSTVVCNPLIDL-YSRNGFVDLARRVFDGLRLKDHSSWVAMISGLS 264
Query: 111 NNNRIDVARKLF------EVMPEKNEVSWTAMLMGYTQCGRIQ--DAWELFKAMPMKSVV 162
N A +LF +MP +++++L + C +I+ + E + +K
Sbjct: 265 KNECEAEAIRLFCDMYVLGIMP--TPYAFSSVL---SACKKIESLEIGEQLHGLVLKLGF 319
Query: 163 AS-----NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTL 217
+S N+++ G + A +F M ++D T++ +I + GY + ++LF
Sbjct: 320 SSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKR 379
Query: 218 MQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGE 277
M +G+ + +L S++ C++ +L G+Q+HA + F + + L+ +Y KC +
Sbjct: 380 MHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCAD 439
Query: 278 LVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSA 337
+ F +++V+WN ++ Y S ++F +M ++P+ T +L
Sbjct: 440 IETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKT 499
Query: 338 CSYTGKVKEGREIFES-MKSKYLVEPKTEHYAC--MVDLLGRAGQVEDAMKLIEAMPFEP 394
C G ++ G +I +K+ + + Y C ++D+ + G+++ A ++
Sbjct: 500 CIRLGDLELGEQIHSQIIKTNFQLNA----YVCSVLIDMYAKLGKLDTAWDILIRFA-GK 554
Query: 395 DAIIWGSLLGACRTHMKLDLAEVAAKKLL 423
D + W +++ + D A +++L
Sbjct: 555 DVVSWTTMIAGYTQYNFDDKALTTFRQML 583
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 120/260 (46%), Gaps = 18/260 (6%)
Query: 4 RNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMM 63
++VVSWT M+ GY + +A T F QM ++ + S V L + A + +
Sbjct: 554 KDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQI 613
Query: 64 PEKDVVA--------QTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRI 115
+ V+ Q +V Y + G+++E F++ + I+W ++SG+ +
Sbjct: 614 HAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNN 673
Query: 116 DVARKLFEVMP----EKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVAS-----NS 166
+ A ++F M + N ++ + + ++ ++ ++ A+ K+ S N+
Sbjct: 674 EEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQV-HAVITKTGYDSETEVCNA 732
Query: 167 MILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVN 226
+I + G + A F ++ K++ +W+ +I Y + G+ E +D F M VR N
Sbjct: 733 LISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPN 792
Query: 227 FPSLISVLSVCASLASLDHG 246
+L+ VLS C+ + +D G
Sbjct: 793 HVTLVGVLSACSHIGLVDKG 812
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 116/240 (48%), Gaps = 14/240 (5%)
Query: 156 MPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGM-IKVYERKGYELEVIDL 214
M ++SV +S I G+ + K R VF + A+++ + + + E + ++ + ID
Sbjct: 18 MFLRSVSSSFIFIHGVPRK---LKTRTVFPTLCGTRRASFAAISVYISEDESFQEKRIDS 74
Query: 215 FTLMQKEGVRVNFPSLISVLSVC-ASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYI 273
++ G+R N +L +L C + SLD GR++H+Q+++ D + ++ L Y+
Sbjct: 75 ---VENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYL 131
Query: 274 KCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVG 333
G+L +FD + I WN +I A L + +F M S V P++ T G
Sbjct: 132 FKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSG 191
Query: 334 VLSACSYTGKVKEGREIFESMKSKYLVEP-KTEHYAC--MVDLLGRAGQVEDAMKLIEAM 390
VL AC G V ++ E + ++ L + + C ++DL R G V+ A ++ + +
Sbjct: 192 VLEACR-GGSV--AFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGL 248
>gi|449437940|ref|XP_004136748.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g52630-like [Cucumis sativus]
Length = 598
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 208/523 (39%), Positives = 318/523 (60%), Gaps = 16/523 (3%)
Query: 89 EIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVM------PEKNEVSWTAMLMGYTQ 142
++FDE PKK+ +W+++IS + N +A + F M P+ + G+
Sbjct: 81 QVFDETPKKSSTTWSSVISAFAQNEAPLLALQFFRRMLNDGVRPDDHIYPSATKACGFL- 139
Query: 143 CGRIQDAWELFKAMPMKS-----VVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSG 197
R D + + +K+ V +S++ + GE+ AR +FD+M E++ +WSG
Sbjct: 140 --RRSDVGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDARHLFDEMPERNVVSWSG 197
Query: 198 MIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQ 257
MI Y + +E + LF E V VN + SV+ VC+S L+ G+ +H ++
Sbjct: 198 MIYGYAQLDDGVEALTLFKQALIEDVDVNDFTFSSVIRVCSSSTFLELGKLIHGLCLKMS 257
Query: 258 FDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFH 317
FD +V S LI++Y KCG + +FD ++++ +WNS++ AQ+ ++ +F
Sbjct: 258 FDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSMLIACAQHAHTQRVFGLFE 317
Query: 318 EMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRA 377
EM + G+ P+ ++ + VL ACS+ G V++GRE F M+ Y +EP+TEHYA +VDLLGRA
Sbjct: 318 EMGNVGMKPNFISFLSVLYACSHAGLVEKGREYFSLMRD-YGIEPETEHYASLVDLLGRA 376
Query: 378 GQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLS 437
G++++A+ +I+ MP P +WG+LL CR H ++A A ++L+++ ++G ++LLS
Sbjct: 377 GKLQEAVSVIKQMPMRPTESVWGALLTGCRIHKDTEMAAFVADRILEMDSSSSGLHVLLS 436
Query: 438 NIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRML 497
N YA+ GR+ + A +RK +R R V K G SW+E KVH FT D SH + I L
Sbjct: 437 NAYAAAGRYEEAARMRKMLRDRGVKKETGLSWVEEGNKVHTFTAGD-RSHAKWVEIYEKL 495
Query: 498 EKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNL 557
E++ + +AGY D+SFVL VD EEK ++RYHSE+LA+A+GL+ P G PIRVMKNL
Sbjct: 496 EELEEEMEKAGYVADTSFVLRAVDGEEKNETIRYHSERLAIAFGLITFPPGRPIRVMKNL 555
Query: 558 RVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
RVCGDCH+AIK +SK GR +I+RD NRFH F+DG CSC DYW
Sbjct: 556 RVCGDCHAAIKFMSKCCGRVLIVRDNNRFHRFEDGKCSCGDYW 598
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/319 (20%), Positives = 147/319 (46%), Gaps = 19/319 (5%)
Query: 2 PERNVVSWTAMVRGYVEEGMITEAGTLFWQM------PEKNVVSWTVMLGGFIRDSRIDD 55
P+++ +W++++ + + A F +M P+ ++ GF+R S +
Sbjct: 87 PKKSSTTWSSVISAFAQNEAPLLALQFFRRMLNDGVRPDDHIYPSATKACGFLRRSDVGK 146
Query: 56 ARRLFDMMPEK--DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNN 113
+ + DV +++V Y + G + + R +FDEMP++NV+SW+ MI GY +
Sbjct: 147 SVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDARHLFDEMPERNVVSWSGMIYGYAQLD 206
Query: 114 RIDVARKLF-EVMPEK---NEVSWTAML-----MGYTQCGRIQDAWELFKAMPMKSVVAS 164
A LF + + E N+ ++++++ + + G++ L + S V S
Sbjct: 207 DGVEALTLFKQALIEDVDVNDFTFSSVIRVCSSSTFLELGKLIHGLCLKMSFDSSSFVGS 266
Query: 165 NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVR 224
++I + G ++ A VFD++ ++ W+ M+ + + V LF M G++
Sbjct: 267 -ALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSMLIACAQHAHTQRVFGLFEEMGNVGMK 325
Query: 225 VNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLI 284
NF S +SVL C+ ++ GR+ + + + + + L+ + + G+L + +
Sbjct: 326 PNFISFLSVLYACSHAGLVEKGREYFSLMRDYGIEPETEHYASLVDLLGRAGKLQEAVSV 385
Query: 285 FDNFASKDI-VMWNSIISG 302
+ +W ++++G
Sbjct: 386 IKQMPMRPTESVWGALLTG 404
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 84/192 (43%), Gaps = 14/192 (7%)
Query: 218 MQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGE 277
+ + N+ + ++L SL G Q+HA +++ V+ LI +Y K
Sbjct: 16 LNQNSFEQNYRQICNLLLSFTRSRSLRQGLQLHAHILKFGLQTIPLVSHNLINLYSKTQL 75
Query: 278 LVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSA 337
+ +FD K W+S+IS +AQ +L+ F M + GV PDD A
Sbjct: 76 PLFSLQVFDETPKKSSTTWSSVISAFAQNEAPLLALQFFRRMLNDGVRPDDHIYPSATKA 135
Query: 338 CSYTGKVKEGREIFESMKSKYLVEPKTEHY------ACMVDLLGRAGQVEDAMKLIEAMP 391
C + + G KS + + KT +Y + +VD+ + G++ DA L + MP
Sbjct: 136 CGFLRRSDVG-------KSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDARHLFDEMP 188
Query: 392 FEPDAIIWGSLL 403
E + + W ++
Sbjct: 189 -ERNVVSWSGMI 199
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 96/216 (44%), Gaps = 17/216 (7%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIR---DSRIDDAR 57
MPERNVVSW+ M+ GY + EA TLF Q ++V IR S +
Sbjct: 187 MPERNVVSWSGMIYGYAQLDDGVEALTLFKQALIEDVDVNDFTFSSVIRVCSSSTFLELG 246
Query: 58 RL-----FDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+L M + + ++ Y + G ++ ++FDE+P +N+ W +M+ +
Sbjct: 247 KLIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSMLIACAQH 306
Query: 113 NRIDVARKLFEVMP----EKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASN--- 165
LFE M + N +S+ ++L + G ++ E F M +
Sbjct: 307 AHTQRVFGLFEEMGNVGMKPNFISFLSVLYACSHAGLVEKGREYFSLMRDYGIEPETEHY 366
Query: 166 -SMILGLGQNGEVQKARVVFDQMREK-DDATWSGMI 199
S++ LG+ G++Q+A V QM + ++ W ++
Sbjct: 367 ASLVDLLGRAGKLQEAVSVIKQMPMRPTESVWGALL 402
>gi|356544848|ref|XP_003540859.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 701
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 231/626 (36%), Positives = 349/626 (55%), Gaps = 40/626 (6%)
Query: 4 RNVVSWTAMVRGYVEEGMITEAGTL------FWQMPEKNVVSWTVMLGG--FIRDSRIDD 55
+N W +M+RGY + A L F Q P+ + + G +R+
Sbjct: 87 KNSFLWNSMIRGYACNNSPSRALFLYLKMLHFGQKPDNFTYPFVLKACGDLLLREM---- 142
Query: 56 ARRLFDMMP----EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVN 111
R++ ++ E+DV +++ Y + G V+ R +FD M +++ SW TM+SG+V
Sbjct: 143 GRKVHALVVVGGLEEDVYVGNSILSMYFKFGDVEAARVVFDRMLVRDLTSWNTMMSGFVK 202
Query: 112 NNRIDVARKLFEVMPEKNEVSW----TAMLMGYTQCGRIQDAWELFKAMPMKSVVASN-- 165
N AR FEV + + T +L + CG + D L + V N
Sbjct: 203 NGE---ARGAFEVFGDMRRDGFVGDRTTLLALLSACGDVMD---LKVGKEIHGYVVRNGE 256
Query: 166 ----------SMILGLGQNGE-VQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDL 214
+ I+ + N E V AR +F+ +R KD +W+ +I YE+ G + ++L
Sbjct: 257 SGRVCNGFLMNSIIDMYCNCESVSCARKLFEGLRVKDVVSWNSLISGYEKCGDAFQALEL 316
Query: 215 FTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIK 274
F M G + ++ISVL+ C +++L G V + +V+ + V+V V + LI MY
Sbjct: 317 FGRMVVVGAVPDEVTVISVLAACNQISALRLGATVQSYVVKRGYVVNVVVGTALIGMYAN 376
Query: 275 CGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGV 334
CG LV +FD K++ +++G+ +G G +++ +F+EM GV PD+ V
Sbjct: 377 CGSLVCACRVFDEMPEKNLPACTVMVTGFGIHGRGREAISIFYEMLGKGVTPDEGIFTAV 436
Query: 335 LSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEP 394
LSACS++G V EG+EIF M Y VEP+ HY+C+VDLLGRAG +++A +IE M +P
Sbjct: 437 LSACSHSGLVDEGKEIFYKMTRDYSVEPRPTHYSCLVDLLGRAGYLDEAYAVIENMKLKP 496
Query: 395 DAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRK 454
+ +W +LL ACR H + LA ++A+KL +L P Y+ LSNIYA++ R+ DV +R
Sbjct: 497 NEDVWTALLSACRLHRNVKLAVISAQKLFELNPDGVSGYVCLSNIYAAERRWEDVENVRA 556
Query: 455 NMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSS 514
+ KR + KPP S++E+ K VH F D SH + I L+ + L++AGY PD+S
Sbjct: 557 LVAKRRLRKPPSYSFVELNKMVHQFFVGD-TSHEQSDDIYAKLKDLNEQLKKAGYKPDTS 615
Query: 515 FVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVM 574
VL+DV+EE K L HSE+LA+A+ L+ G IR+ KNLRVCGDCH+ IK+ISK+
Sbjct: 616 LVLYDVEEEIKEKMLWDHSERLALAFALINTGPGTTIRITKNLRVCGDCHTVIKMISKLT 675
Query: 575 GREIILRDANRFHHFKDGLCSCRDYW 600
REII+RD RFHHF+DGLCSC YW
Sbjct: 676 NREIIMRDICRFHHFRDGLCSCGGYW 701
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 115/236 (48%), Gaps = 13/236 (5%)
Query: 175 GEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVL 234
G + A+ +FDQ+ K+ W+ MI+ Y + L+ M G + + + VL
Sbjct: 72 GHMPYAQHIFDQIVLKNSFLWNSMIRGYACNNSPSRALFLYLKMLHFGQKPDNFTYPFVL 131
Query: 235 SVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIV 294
C L + GR+VHA +V + DVYV + +++MY K G++ +++FD +D+
Sbjct: 132 KACGDLLLREMGRKVHALVVVGGLEEDVYVGNSILSMYFKFGDVEAARVVFDRMLVRDLT 191
Query: 295 MWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESM 354
WN+++SG+ + G + +VF +M G + D TL+ +LSAC +K G+EI
Sbjct: 192 SWNTMMSGFVKNGEARGAFEVFGDMRRDGFVGDRTTLLALLSACGDVMDLKVGKEI---- 247
Query: 355 KSKYLVEPKTEHYAC-------MVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
Y+V C ++D+ V A KL E + + D + W SL+
Sbjct: 248 -HGYVVRNGESGRVCNGFLMNSIIDMYCNCESVSCARKLFEGLRVK-DVVSWNSLI 301
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 85/353 (24%), Positives = 151/353 (42%), Gaps = 54/353 (15%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF-D 61
E +V +++ Y + G + A +F +M +++ SW M+ GF+++ A +F D
Sbjct: 156 EEDVYVGNSILSMYFKFGDVEAARVVFDRMLVRDLTSWNTMMSGFVKNGEARGAFEVFGD 215
Query: 62 MMPEKDVVAQTNM--VLGYCQD-GRVDEGREIFDEMPKK-------NVISWTTMISGYVN 111
M + V +T + +L C D + G+EI + + N ++I Y N
Sbjct: 216 MRRDGFVGDRTTLLALLSACGDVMDLKVGKEIHGYVVRNGESGRVCNGFLMNSIIDMYCN 275
Query: 112 NNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAM----------PMKSV 161
+ ARKLFE + K+ VSW +++ GY +CG A ELF M + SV
Sbjct: 276 CESVSCARKLFEGLRVKDVVSWNSLISGYEKCGDAFQALELFGRMVVVGAVPDEVTVISV 335
Query: 162 VASNSMILGLGQNGEVQKARV-----------------------------VFDQMREKDD 192
+A+ + I L VQ V VFD+M EK+
Sbjct: 336 LAACNQISALRLGATVQSYVVKRGYVVNVVVGTALIGMYANCGSLVCACRVFDEMPEKNL 395
Query: 193 ATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQ 252
+ M+ + G E I +F M +GV + +VLS C+ +D G+++ +
Sbjct: 396 PACTVMVTGFGIHGRGREAISIFYEMLGKGVTPDEGIFTAVLSACSHSGLVDEGKEIFYK 455
Query: 253 LVRCQFDVDVYVA--SVLITMYIKCGELVKGKLIFDNFASK-DIVMWNSIISG 302
+ R + V+ S L+ + + G L + + +N K + +W +++S
Sbjct: 456 MTR-DYSVEPRPTHYSCLVDLLGRAGYLDEAYAVIENMKLKPNEDVWTALLSA 507
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 59/126 (46%), Gaps = 3/126 (2%)
Query: 216 TLMQKEGVRVNFPSLI--SVLSVCASLASLDHGRQVHAQLVRC-QFDVDVYVASVLITMY 272
TL+ K F SL ++L + SL Q+HA + + Y+A+ L Y
Sbjct: 9 TLIPKPSSTSTFDSLQCGTLLQSLTNSKSLTQALQLHAHVTTGGTLRRNTYLATKLAACY 68
Query: 273 IKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLV 332
CG + + IFD K+ +WNS+I GYA ++L ++ +M G PD+ T
Sbjct: 69 AVCGHMPYAQHIFDQIVLKNSFLWNSMIRGYACNNSPSRALFLYLKMLHFGQKPDNFTYP 128
Query: 333 GVLSAC 338
VL AC
Sbjct: 129 FVLKAC 134
>gi|414587348|tpg|DAA37919.1| TPA: hypothetical protein ZEAMMB73_411767 [Zea mays]
Length = 920
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 224/633 (35%), Positives = 353/633 (55%), Gaps = 50/633 (7%)
Query: 16 YVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNM- 74
YV+ G I A +F NVV W +ML + + S + + +F M +
Sbjct: 290 YVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNKFTY 349
Query: 75 --VLGYCQ-DGRVDEGREIFDEMPKKNVISWTTMISG-----YVNNNRIDVARKLFEVMP 126
+L C G+++ G +I + KN +SG Y +D ARK+ E++
Sbjct: 350 PCILRTCTCTGQIELGEQI-HSLSIKNGFESDMYVSGVLIDMYSKYRCLDKARKILEMLE 408
Query: 127 EKNEVSWTAMLMGYTQCGRIQDAWELFKAM------PMKSVVAS---------------- 164
+++ VSWT+M+ GY Q ++A FK M P +AS
Sbjct: 409 KRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQ 468
Query: 165 -----------------NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGY 207
N+++ + G ++A +F ++ KD+ TW+G+I + +
Sbjct: 469 IHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREIDHKDEITWNGLISGFGQSRL 528
Query: 208 ELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASV 267
+ + +F M + G + N + IS +S A+LA + G+QVH + V+ + VA+
Sbjct: 529 YEQALMVFMKMSQAGAKYNVFTFISAISALANLADIKQGKQVHGRAVKTGHTSETEVANA 588
Query: 268 LITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPD 327
LI++Y KCG + K+IF + ++ V WN+II+ +Q+G G ++L +F +M G+ P+
Sbjct: 589 LISLYGKCGSIEDAKMIFSEMSLRNEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLKPN 648
Query: 328 DVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLI 387
DVT +GVL+ACS+ G V+EG F+SM + Y + P +HYAC+VD+LGRAGQ++ A + +
Sbjct: 649 DVTFIGVLAACSHVGLVEEGLSYFKSMSNVYGLNPIPDHYACVVDILGRAGQLDRARRFV 708
Query: 388 EAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFH 447
+ MP +A+IW +LL AC+ H +++ E+AAK LL+LEP ++ Y+LLSN YA G++
Sbjct: 709 DEMPITANAMIWRTLLSACKVHKNIEIGELAAKHLLELEPHDSASYVLLSNAYAVTGKWA 768
Query: 448 DVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREA 507
+ ++RK M+ R + K PG SWIEV+ VH F D + HP I + L ++ L +
Sbjct: 769 NRDQVRKMMKDRGIRKEPGRSWIEVKNAVHAFFVGDRL-HPLSDQIYKFLSELNDRLSKI 827
Query: 508 GYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAI 567
GY ++ + H+ ++E+K + HSEKLAVA+GL+ LP +P+RV+KNLRVC DCHS +
Sbjct: 828 GYKQENPNLFHEKEQEQKDPTAFVHSEKLAVAFGLMTLPPCIPLRVIKNLRVCDDCHSWM 887
Query: 568 KLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
K S+V REI+LRD RFHHF G CSC DYW
Sbjct: 888 KFTSEVTRREIVLRDVYRFHHFNSGSCSCGDYW 920
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 109/436 (25%), Positives = 199/436 (45%), Gaps = 51/436 (11%)
Query: 16 YVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQT--- 72
Y + G++ +A +F ++ ++ VSW ML G+ + +A RL+ M V+
Sbjct: 88 YAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQRGLGKEAFRLYSQMHWTAVIPTPYVL 147
Query: 73 NMVLGYCQDGRV-DEGREIFDEMPKKNVISWT----TMISGYVNNNRIDVARKLFEVMPE 127
+ VL C G++ +GR I ++ K+ S T +I+ Y+ +A ++F M
Sbjct: 148 SSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERVFCDMLF 207
Query: 128 KNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSV------VAS----------------- 164
+ V++ ++ G+ QCG + A ++F M + + VAS
Sbjct: 208 CDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQL 267
Query: 165 NSMILGLGQN----------------GEVQKARVVFDQMREKDDATWSGMIKVYERKGYE 208
+S +L G + G+++ A +F+ + W+ M+ Y +
Sbjct: 268 HSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDL 327
Query: 209 LEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVL 268
+ ++F MQ G+ N + +L C ++ G Q+H+ ++ F+ D+YV+ VL
Sbjct: 328 AKSFEIFGQMQATGIHPNKFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVL 387
Query: 269 ITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDD 328
I MY K L K + I + +D+V W S+I+GY Q+ E++L F EM GV PD+
Sbjct: 388 IDMYSKYRCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDN 447
Query: 329 VTLVGVLSACSYTGKVKEGREIFESMK-SKYLVEPKTEHYACMVDLLGRAGQVEDAMKLI 387
+ L SAC+ +++G +I + S Y + + +V+L R G+ E+A L
Sbjct: 448 IGLASAASACAGIKAMRQGLQIHARVYVSGYAADISI--WNTLVNLYARCGRSEEAFSLF 505
Query: 388 EAMPFEPDAIIWGSLL 403
+ D I W L+
Sbjct: 506 REID-HKDEITWNGLI 520
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 93/374 (24%), Positives = 179/374 (47%), Gaps = 32/374 (8%)
Query: 78 YCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAML 137
Y ++G V + R++F E+ ++ +SW M+SGY A +L+ +++ WTA++
Sbjct: 88 YAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQRGLGKEAFRLY------SQMHWTAVI 141
Query: 138 MG-------YTQC--------GRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARV 182
+ C GR+ A +A ++ V + + L LG G + A
Sbjct: 142 PTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLG-FGSFKLAER 200
Query: 183 VFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLAS 242
VF M D T++ +I + + G+ + +F MQ G+R + ++ S+L+ CAS+
Sbjct: 201 VFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGD 260
Query: 243 LDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISG 302
L G+Q+H+ L++ D L+ +Y+KCG++ IF+ ++V+WN ++
Sbjct: 261 LQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVA 320
Query: 303 YAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEP 362
Y Q KS ++F +M ++G+ P+ T +L C+ TG+++ G +I S+ K E
Sbjct: 321 YGQISDLAKSFEIFGQMQATGIHPNKFTYPCILRTCTCTGQIELGEQI-HSLSIKNGFES 379
Query: 363 KTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKL 422
++D+ + ++ A K++E + + D + W S++ H D E A
Sbjct: 380 DMYVSGVLIDMYSKYRCLDKARKILEMLE-KRDVVSWTSMIAGYVQH---DFCEEALATF 435
Query: 423 LQLE-----PKNAG 431
+++ P N G
Sbjct: 436 KEMQDCGVWPDNIG 449
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 125/246 (50%), Gaps = 12/246 (4%)
Query: 165 NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVR 224
N +I +NG V +AR VF ++ +D +W M+ Y ++G E L++ M V
Sbjct: 82 NLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQRGLGKEAFRLYSQMHWTAVI 141
Query: 225 VNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLI 284
L SVLS C GR +HAQ+ + F + +V + LI +Y+ G + +
Sbjct: 142 PTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERV 201
Query: 285 FDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKV 344
F + D V +N++ISG+AQ G GE +L++F EM SG+ PD VT+ +L+AC+ G +
Sbjct: 202 FCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDL 261
Query: 345 KEGREIFE-----SMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIW 399
++G+++ M Y+ E ++DL + G +E A + + + ++W
Sbjct: 262 QKGKQLHSYLLKAGMSFDYITE------GSLLDLYVKCGDIETAHDIFN-LGDRTNVVLW 314
Query: 400 GSLLGA 405
+L A
Sbjct: 315 NLMLVA 320
>gi|147861249|emb|CAN79322.1| hypothetical protein VITISV_018985 [Vitis vinifera]
Length = 932
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 198/518 (38%), Positives = 316/518 (61%), Gaps = 36/518 (6%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MP+R +V+ +AM+ GY + G++ A +F M + NV SWT ++ G+ RD ++ A +LF
Sbjct: 32 MPDRTIVAESAMIDGYAKAGLMDSAQKVFDAMIDTNVFSWTSLISGYFRDGQVAKACQLF 91
Query: 61 DMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARK 120
D MP K+VV+ T MVLGY ++G +D+ R +F++MP+KN ISWT M+ YV+N R D A K
Sbjct: 92 DQMPAKNVVSWTTMVLGYARNGLIDQARSVFNQMPEKNTISWTAMMKSYVDNGRTDEALK 151
Query: 121 LFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKA 180
LF MP++N SW M+ G R+ +A++LF MP+++ V+ M+ GL +NG + A
Sbjct: 152 LFHEMPQRNLYSWNTMISGCLDGKRVNEAFKLFHLMPLRNAVSWTIMVSGLARNGFTKLA 211
Query: 181 RVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEG------------------ 222
R FDQM KD A W+ MI Y + +E +LF LM +
Sbjct: 212 REYFDQMPNKDIAAWNAMITAYVDECLIVEASELFNLMTERNIVTWNAMIDGYARHRPDG 271
Query: 223 -------------VRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLI 269
+R N ++ +L+ C + L Q HA + + + +++ LI
Sbjct: 272 EAMKHLILMLRSCIRPNETTMTIILTSCWGMLEL---MQAHALAIVVGCECETSLSNALI 328
Query: 270 TMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDV 329
TMY + G++ ++ F++ +KD+V W +++ + +G G+ +L VF M SG PD++
Sbjct: 329 TMYSRIGDISSSRIAFESLKAKDVVSWTAMLLAFTYHGHGDHALHVFGHMLKSGTKPDEI 388
Query: 330 TLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEA 389
T VGVLSACS+ G VK+G+++F+SM Y +EP+ EHY+C+VD+LGRAGQV +AM ++
Sbjct: 389 TFVGVLSACSHAGLVKKGQKLFDSMSRAYGLEPRAEHYSCLVDILGRAGQVHEAMDVVWK 448
Query: 390 MP-FEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHD 448
MP E D + G+LLGACR H +++A+ +KL++L+P ++G Y+LL+N++A++G + +
Sbjct: 449 MPECERDGAVLGALLGACRLHGNVEMADYIGQKLIELQPNSSGGYVLLANVFAARGNWDE 508
Query: 449 VAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVS 486
AE+RK M+ RNV K PG S IE ++ + TG+ +S
Sbjct: 509 FAEVRKKMKDRNVRKVPGFSQIEFQQG-QILTGQPKIS 545
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 69/138 (50%), Gaps = 10/138 (7%)
Query: 266 SVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVM 325
+ +IT Y+K EL K + +F + IV +++I GYA+ GL + + KVF M + V
Sbjct: 10 TAMITAYLKNNELRKAEKLFQTMPDRTIVAESAMIDGYAKAGLMDSAQKVFDAMIDTNVF 69
Query: 326 PDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMK 385
+ ++S G+V + ++F+ M +K +V + MV R G ++ A
Sbjct: 70 ----SWTSLISGYFRDGQVAKACQLFDQMPAKNVVS-----WTTMVLGYARNGLIDQARS 120
Query: 386 LIEAMPFEPDAIIWGSLL 403
+ MP E + I W +++
Sbjct: 121 VFNQMP-EKNTISWTAMM 137
>gi|357507131|ref|XP_003623854.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498869|gb|AES80072.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 865
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 211/560 (37%), Positives = 336/560 (60%), Gaps = 13/560 (2%)
Query: 53 IDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMP----KKNVISWTTMISG 108
++ ARR+FD + +DVV+ T++ Y + G +G ++F EM K N ++ ++++
Sbjct: 215 VEGARRVFDDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPA 274
Query: 109 YVNNNRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVAS 164
+ +++ N +A++ Y +C +++A +F MP + VV+
Sbjct: 275 CAELKDLKSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSW 334
Query: 165 NSMILGLGQNGEVQKARVVFDQMRE----KDDATWSGMIKVYERKGYELEVIDLFTLMQK 220
N ++ +N E +K +F +M D+ATW+ +I G E +++F MQK
Sbjct: 335 NGVLTAYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQK 394
Query: 221 EGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVK 280
G + N ++ S+L C+ +L G+++H + R D+ + L+ MY KCG+L
Sbjct: 395 MGFKPNEITISSILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKCGDLNL 454
Query: 281 GKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSY 340
+ +FD KD+V WN++I A +G G+++L +F +M S V P+ VT GVLS CS+
Sbjct: 455 SRNVFDMMRRKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGVLSGCSH 514
Query: 341 TGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWG 400
+ V+EG +IF SM +LVEP HY+C+VD+ RAG++ +A K I+ MP EP A WG
Sbjct: 515 SRLVEEGVQIFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPMEPTASAWG 574
Query: 401 SLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRN 460
+LL ACR + ++LA+++AKKL ++EP N G Y+ L NI + + + +++R M++R
Sbjct: 575 ALLAACRVYKNVELAKISAKKLFEIEPNNPGNYVSLFNILVTAKMWSEASQVRILMKERG 634
Query: 461 VIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDV 520
+ K PGCSW++V KVH F D S+ E I L+++ ++ AGY PD+ +VL D+
Sbjct: 635 ITKTPGCSWLQVGNKVHTFVVGD-KSNIESDKIYNFLDELVEKMKMAGYKPDTDYVLQDI 693
Query: 521 DEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIIL 580
D+EEK SL HSEKLAVA+G++ L IRV KNLR+CGDCH+AIK +SKV+G I++
Sbjct: 694 DQEEKAESLCNHSEKLAVAFGILNLNGQSTIRVFKNLRICGDCHNAIKYMSKVVGVIIVV 753
Query: 581 RDANRFHHFKDGLCSCRDYW 600
RD+ RFHHFK+G CSC+D W
Sbjct: 754 RDSLRFHHFKNGNCSCKDLW 773
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 139/282 (49%), Gaps = 8/282 (2%)
Query: 82 GRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKN-EVSWTAMLMGY 140
G + R++FD +P+ + + +T+IS + + A K++ + E+ + L
Sbjct: 112 GDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPDMPVFLAAA 171
Query: 141 TQCGRIQDAWEL-------FKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDA 193
C DA + + M V N++I G+ V+ AR VFD + +D
Sbjct: 172 KACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFDDLVVRDVV 231
Query: 194 TWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQL 253
+W+ + Y + G+ + +D+F M GV+ N ++ S+L CA L L G+++H
Sbjct: 232 SWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKSGKEIHGFA 291
Query: 254 VRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSL 313
VR V+++V S L+++Y KC + + +++FD +D+V WN +++ Y + EK
Sbjct: 292 VRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYFKNKEYEKGF 351
Query: 314 KVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMK 355
+F +M GV D+ T V+ C G+ +E E+F M+
Sbjct: 352 SLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQ 393
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 74/146 (50%), Gaps = 13/146 (8%)
Query: 36 NVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEM- 94
++ S T +L + + ++ +R +FDMM KDVVA M++ G E +FD+M
Sbjct: 435 DLTSTTALLYMYAKCGDLNLSRNVFDMMRRKDVVAWNTMIIANAMHGNGKEALFLFDKML 494
Query: 95 ---PKKNVISWTTMISGYVNNNRIDVARKLFEVM-------PEKNEVSWTAMLMGYTQCG 144
+ N +++T ++SG ++ ++ ++F M P+ N S + Y++ G
Sbjct: 495 LSRVQPNSVTFTGVLSGCSHSRLVEEGVQIFNSMGRDHLVEPDANHYSCVVDI--YSRAG 552
Query: 145 RIQDAWELFKAMPMKSVVASNSMILG 170
R+ +A++ + MPM+ ++ +L
Sbjct: 553 RLNEAYKFIQGMPMEPTASAWGALLA 578
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 28/135 (20%), Positives = 61/135 (45%), Gaps = 2/135 (1%)
Query: 268 LITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPD 327
LI + + G+ + + +FDN D +++IS +GL +++K++ + G+ PD
Sbjct: 104 LIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPD 163
Query: 328 DVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLI 387
+ AC+ +G +E+ + ++ V ++ G+ VE A ++
Sbjct: 164 MPVFLAAAKACAVSGDALRVKEVHDD-ATRCGVMSDVFVGNALIHAYGKCKCVEGARRVF 222
Query: 388 EAMPFEPDAIIWGSL 402
+ + D + W SL
Sbjct: 223 DDLVVR-DVVSWTSL 236
>gi|218192399|gb|EEC74826.1| hypothetical protein OsI_10663 [Oryza sativa Indica Group]
Length = 703
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 213/550 (38%), Positives = 324/550 (58%), Gaps = 21/550 (3%)
Query: 53 IDDARRLFDMMPEKDVVAQTNMVLGYCQDGR-VDEGREIFDEMPKKNVISWTTMISGYVN 111
+ DA LF + D+ + ++ + R + RE+FD MP+++ +W+ ++SGY
Sbjct: 79 LPDALALFSSIAAPDICSHNTLISALSRSPRHLPSARELFDRMPQRDHFAWSALVSGYAR 138
Query: 112 NNRIDVARKLFEVMPEK-------NEVSWTAMLMGYT--QCGRIQDAWELFKAMPMKSVV 162
+ + + A L+ M E+ NE + ++ L +CGR EL + + +
Sbjct: 139 HGQPEAALALYRRMQEEPGNDGADNEFTASSALAAAAAARCGRA--GRELHCHVVRRGID 196
Query: 163 AS-------NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLF 215
A+ +++ + G V AR VFD+M +D +W+ M++ Y G E LF
Sbjct: 197 AAGGDAVLWSALADMYAKCGRVDDARRVFDRMPVRDAVSWTAMVERYFDGGRGGEGFRLF 256
Query: 216 T-LMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIK 274
+++ GVR N + VL CA A GRQVH ++ + + S L+ MY K
Sbjct: 257 LHMLRTRGVRPNEFTYAGVLRACAEFAVESFGRQVHGRMAKSGTGDSCFAESALLRMYSK 316
Query: 275 CGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGV 334
CG++ +F+ A D+V W ++ISGYAQ G E++L+ F SG+ PD VT VGV
Sbjct: 317 CGDMGSAVRVFEAMAKPDLVSWTAVISGYAQNGQPEEALRYFDMFLRSGIKPDHVTFVGV 376
Query: 335 LSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEP 394
LSAC++ G V +G EIF S+K +Y +E +HYAC++DLL R+GQ E A K+I M +P
Sbjct: 377 LSACAHAGLVDKGLEIFHSIKEQYCIEHTADHYACVIDLLSRSGQFERAEKMIGNMAVKP 436
Query: 395 DAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRK 454
+ +W SLLG CR H + LA AA+ L ++EP+N Y+ L+NIYAS G F +V ++R+
Sbjct: 437 NKFLWASLLGGCRIHKNVGLARRAAEALFEIEPENPATYVTLANIYASVGLFDEVEDVRR 496
Query: 455 NMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSS 514
M + + K P SWIEV ++VH+F D SHP+ I +L+K+ + E GY D
Sbjct: 497 IMESKGITKMPASSWIEVGRRVHVFLVGD-KSHPKADEIYALLKKLYVKMVEEGYVADIE 555
Query: 515 FVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVM 574
FVLHDV++E+K + YHSE+LAVA+G++ PEG PI+V KNLR+CGDCH+AIKLIS+++
Sbjct: 556 FVLHDVEDEQKEQDIGYHSERLAVAFGIIASPEGSPIKVFKNLRICGDCHAAIKLISQIV 615
Query: 575 GREIILRDAN 584
R+II+RD+N
Sbjct: 616 QRDIIVRDSN 625
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 84/398 (21%), Positives = 166/398 (41%), Gaps = 74/398 (18%)
Query: 22 ITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEK--------------- 66
+ A LF +MP+++ +W+ ++ G+ R + + A L+ M E+
Sbjct: 111 LPSARELFDRMPQRDHFAWSALVSGYARHGQPEAALALYRRMQEEPGNDGADNEFTASSA 170
Query: 67 ------------------------------DVVAQTNMVLGYCQDGRVDEGREIFDEMPK 96
D V + + Y + GRVD+ R +FD MP
Sbjct: 171 LAAAAAARCGRAGRELHCHVVRRGIDAAGGDAVLWSALADMYAKCGRVDDARRVFDRMPV 230
Query: 97 KNVISWTTMISGYVNNNRIDVARKLFEVM-----PEKNEVSWTAMLMGYTQ-----CGRI 146
++ +SWT M+ Y + R +LF M NE ++ +L + GR
Sbjct: 231 RDAVSWTAMVERYFDGGRGGEGFRLFLHMLRTRGVRPNEFTYAGVLRACAEFAVESFGR- 289
Query: 147 QDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKG 206
Q + K+ S A ++++ + G++ A VF+ M + D +W+ +I Y + G
Sbjct: 290 QVHGRMAKSGTGDSCFAESALLRMYSKCGDMGSAVRVFEAMAKPDLVSWTAVISGYAQNG 349
Query: 207 YELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVR---CQFDVDVY 263
E + F + + G++ + + + VLS CA +D G ++ + + D Y
Sbjct: 350 QPEEALRYFDMFLRSGIKPDHVTFVGVLSACAHAGLVDKGLEIFHSIKEQYCIEHTADHY 409
Query: 264 VASVLITMYIKCGELVKGKLIFDNFASK-DIVMWNSIISG---YAQYGLGEKSLKVFHEM 319
+ +I + + G+ + + + N A K + +W S++ G + GL ++ + E
Sbjct: 410 --ACVIDLLSRSGQFERAEKMIGNMAVKPNKFLWASLLGGCRIHKNVGLARRAAEALFE- 466
Query: 320 FSSGVMPDD----VTLVGVLSACSYTGKVKEGREIFES 353
+ P++ VTL + ++ +V++ R I ES
Sbjct: 467 ----IEPENPATYVTLANIYASVGLFDEVEDVRRIMES 500
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/266 (20%), Positives = 116/266 (43%), Gaps = 26/266 (9%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM-----PEKNVVSWTVMLGGFIRDSRIDD 55
MP R+ VSWTAMV Y + G E LF M N ++ +L +
Sbjct: 228 MPVRDAVSWTAMVERYFDGGRGGEGFRLFLHMLRTRGVRPNEFTYAGVLRACAEFAVESF 287
Query: 56 ARRLFDMMPEK----DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVN 111
R++ M + A++ ++ Y + G + +F+ M K +++SWT +ISGY
Sbjct: 288 GRQVHGRMAKSGTGDSCFAESALLRMYSKCGDMGSAVRVFEAMAKPDLVSWTAVISGYAQ 347
Query: 112 NNRIDVARKLFEVM----PEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNS- 166
N + + A + F++ + + V++ +L G + E+F ++ + + +
Sbjct: 348 NGQPEEALRYFDMFLRSGIKPDHVTFVGVLSACAHAGLVDKGLEIFHSIKEQYCIEHTAD 407
Query: 167 ----MILGLGQNGEVQKARVVFDQMREKDD----ATWSGMIKVYERKGYELEVIDLFTLM 218
+I L ++G+ ++A + M K + A+ G ++++ G + +
Sbjct: 408 HYACVIDLLSRSGQFERAEKMIGNMAVKPNKFLWASLLGGCRIHKNVGLARRAAEALFEI 467
Query: 219 QKEGVRVNFPSLISVLSVCASLASLD 244
+ E N + +++ ++ AS+ D
Sbjct: 468 EPE----NPATYVTLANIYASVGLFD 489
>gi|297826975|ref|XP_002881370.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297327209|gb|EFH57629.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 627
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 190/506 (37%), Positives = 311/506 (61%), Gaps = 4/506 (0%)
Query: 4 RNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMM 63
+NVV+WTAMV GY+ ++ A TLF +MPE+N+VSW M+ G+ + RID A LFD M
Sbjct: 107 KNVVTWTAMVSGYLRSKQLSVAETLFQEMPERNIVSWNTMIDGYAQSGRIDKALELFDEM 166
Query: 64 PEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFE 123
PE++ V+ M+ Q GR+DE +F+ MP K+VISWT M+ G N ++D AR+LF+
Sbjct: 167 PERNTVSWNTMIKALVQRGRIDEAMNLFERMPIKDVISWTAMVDGLAKNGKVDEARRLFD 226
Query: 124 VMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVV 183
MPE+N +SW AM+ GYT RI +A +LF+ MP + + N+MI G +N E+ +A +
Sbjct: 227 CMPERNIISWNAMITGYTYNNRIDEADQLFQVMPERDFASWNTMITGFIRNREINRACGL 286
Query: 184 FDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEG-VRVNFPSLISVLSVCASLAS 242
FD+M +K+ +W+ MI Y E + +F+ M ++G V+ N + +S+LS C+ LA
Sbjct: 287 FDRMPQKNVISWTAMITGYVENKENEEALKVFSKMLRDGCVKPNVGTYVSILSACSDLAG 346
Query: 243 LDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDN--FASKDIVMWNSII 300
L G+Q+H + + + V S LI MY K GEL+ + +FDN +D++ WNS+I
Sbjct: 347 LVEGQQIHQLISKSVHQENEVVTSALINMYSKSGELIAARKMFDNGLVCQRDLISWNSMI 406
Query: 301 SGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLV 360
+ YA +G G+++++++ +M G P +VT + +L ACS+ G V++G E F+ + +
Sbjct: 407 AVYAHHGHGKEAIEMYDQMRKHGFKPSEVTYLNLLFACSHAGLVEKGMEFFKELVRDESL 466
Query: 361 EPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAK 420
+ EHY C+VDL GRAG+++D + I +G++L AC H ++ +A+ K
Sbjct: 467 PLREEHYTCLVDLCGRAGRLKDVLNFINCDDARLSRSFYGAILSACNVHSEVSIAKEVVK 526
Query: 421 KLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFT 480
K+L+ +AG Y+++SNIYA+ G+ AE+R M+++ + K PGCSW+++ + H+F
Sbjct: 527 KVLETGSDDAGTYVMMSNIYAASGKREKAAEMRMKMKEKGLKKQPGCSWVKIGNQTHLFV 586
Query: 481 GRDCVSHPEHPMIMRMLEKIGGLLRE 506
D SHP+ + ++ + +R+
Sbjct: 587 VGD-KSHPQFEALDSIVSDLRNKMRK 611
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 117/370 (31%), Positives = 210/370 (56%), Gaps = 12/370 (3%)
Query: 43 MLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEM-PKKNVIS 101
++G + ++ +AR+LFD +PE+DVV T+++ GY + G + E RE+FD + +KNV++
Sbjct: 52 LIGKLCKVGKLAEARKLFDGLPERDVVTWTDVITGYIKLGNMREARELFDRVDSRKNVVT 111
Query: 102 WTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSV 161
WT M+SGY+ + ++ VA LF+ MPE+N VSW M+ GY Q GRI A ELF MP ++
Sbjct: 112 WTAMVSGYLRSKQLSVAETLFQEMPERNIVSWNTMIDGYAQSGRIDKALELFDEMPERNT 171
Query: 162 VASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKE 221
V+ N+MI L Q G + +A +F++M KD +W+ M+ + G E LF M +
Sbjct: 172 VSWNTMIKALVQRGRIDEAMNLFERMPIKDVISWTAMVDGLAKNGKVDEARRLFDCMPER 231
Query: 222 GVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKG 281
+ +++ ++I+ + + D QL + + D + +IT +I+ E+ +
Sbjct: 232 NI-ISWNAMITGYTYNNRIDEAD-------QLFQVMPERDFASWNTMITGFIRNREINRA 283
Query: 282 KLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSG-VMPDDVTLVGVLSACSY 340
+FD K+++ W ++I+GY + E++LKVF +M G V P+ T V +LSACS
Sbjct: 284 CGLFDRMPQKNVISWTAMITGYVENKENEEALKVFSKMLRDGCVKPNVGTYVSILSACSD 343
Query: 341 TGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIE-AMPFEPDAIIW 399
+ EG++I + + SK + + + ++++ ++G++ A K+ + + + D I W
Sbjct: 344 LAGLVEGQQIHQ-LISKSVHQENEVVTSALINMYSKSGELIAARKMFDNGLVCQRDLISW 402
Query: 400 GSLLGACRTH 409
S++ H
Sbjct: 403 NSMIAVYAHH 412
>gi|414587344|tpg|DAA37915.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
gi|414587345|tpg|DAA37916.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
Length = 920
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 224/633 (35%), Positives = 353/633 (55%), Gaps = 50/633 (7%)
Query: 16 YVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQT--- 72
YV+ G I A +F NVV W +ML + + S + + +F M +
Sbjct: 290 YVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNQFTY 349
Query: 73 NMVLGYCQ-DGRVDEGREIFDEMPKKNVISWTTMISG-----YVNNNRIDVARKLFEVMP 126
+L C G+++ G +I + KN +SG Y +D ARK+ E++
Sbjct: 350 PCILRTCTCTGQIELGEQI-HSLSIKNGFESDMYVSGVLIDMYSKYGCLDKARKILEMLE 408
Query: 127 EKNEVSWTAMLMGYTQCGRIQDAWELFKAM------PMKSVVAS---------------- 164
+++ VSWT+M+ GY Q ++A FK M P +AS
Sbjct: 409 KRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQ 468
Query: 165 -----------------NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGY 207
N+++ + G ++A +F ++ KD+ TW+G+I + +
Sbjct: 469 IHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREIEHKDEITWNGLISGFGQSRL 528
Query: 208 ELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASV 267
+ + +F M + G + N + IS +S A+LA + G+QVH + V+ + VA+
Sbjct: 529 YKQALMVFMKMGQAGAKYNVFTFISAISALANLADIKQGKQVHGRAVKTGHTSETEVANA 588
Query: 268 LITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPD 327
LI++Y KCG + K+IF + ++ V WN+II+ +Q+G G ++L +F +M G+ P+
Sbjct: 589 LISLYGKCGSIEDAKMIFSEMSLRNEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLKPN 648
Query: 328 DVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLI 387
DVT +GVL+ACS+ G V+EG F+SM + Y + P +HYAC+VD+LGRAGQ++ A + +
Sbjct: 649 DVTFIGVLAACSHVGLVEEGLSYFKSMSNVYGLNPIPDHYACVVDILGRAGQLDRARRFV 708
Query: 388 EAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFH 447
+ MP +A+IW +LL AC+ H +++ E+AAK LL+LEP ++ Y+LLSN YA G++
Sbjct: 709 DEMPITANAMIWRTLLSACKVHKNIEIGELAAKHLLELEPHDSASYVLLSNAYAVTGKWA 768
Query: 448 DVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREA 507
+ ++RK M+ R + K PG SWIEV+ VH F D + HP I + L ++ L +
Sbjct: 769 NRDQVRKMMKDRGIRKEPGRSWIEVKNAVHAFFVGDRL-HPLSDQIYKFLSELNDRLSKI 827
Query: 508 GYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAI 567
GY ++ + H+ ++E+K + HSEKLAVA+GL+ LP +P+RV+KNLRVC DCHS +
Sbjct: 828 GYKQENPNLFHEKEQEQKDPTAFVHSEKLAVAFGLMTLPPCIPLRVIKNLRVCDDCHSWM 887
Query: 568 KLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
K S+V REI+LRD RFHHF G CSC DYW
Sbjct: 888 KCTSEVTRREIVLRDVYRFHHFNSGSCSCGDYW 920
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 110/436 (25%), Positives = 201/436 (46%), Gaps = 51/436 (11%)
Query: 16 YVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQT--- 72
Y + G++ +A +F ++ ++ VSW ML G+ + +A RL+ M V+
Sbjct: 88 YAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQSGLGKEAFRLYSQMHWTAVIPTPYVL 147
Query: 73 NMVLGYCQDGRV-DEGREIFDEMPKKNVISWT----TMISGYVNNNRIDVARKLFEVMPE 127
+ VL C G++ +GR I ++ K+ S T +I+ Y+ +A ++F M
Sbjct: 148 SSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERVFCDMLF 207
Query: 128 KNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSV------VAS----------------- 164
+ V++ ++ G+ QCG + A ++F M + + VAS
Sbjct: 208 CDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQL 267
Query: 165 NSMILGLGQN----------------GEVQKARVVFDQMREKDDATWSGMIKVYERKGYE 208
+S +L G + G+++ A +F+ + W+ M+ Y +
Sbjct: 268 HSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDL 327
Query: 209 LEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVL 268
+ ++F MQ G+ N + +L C ++ G Q+H+ ++ F+ D+YV+ VL
Sbjct: 328 AKSFEIFGQMQATGIHPNQFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVL 387
Query: 269 ITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDD 328
I MY K G L K + I + +D+V W S+I+GY Q+ E++L F EM GV PD+
Sbjct: 388 IDMYSKYGCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDN 447
Query: 329 VTLVGVLSACSYTGKVKEGREIFESMK-SKYLVEPKTEHYACMVDLLGRAGQVEDAMKLI 387
+ L SAC+ +++G +I + S Y + + +V+L R G+ E+A L
Sbjct: 448 IGLASAASACAGIKAMRQGLQIHARVYVSGYAADISI--WNTLVNLYARCGRSEEAFSLF 505
Query: 388 EAMPFEPDAIIWGSLL 403
+ + D I W L+
Sbjct: 506 REIEHK-DEITWNGLI 520
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 94/374 (25%), Positives = 181/374 (48%), Gaps = 32/374 (8%)
Query: 78 YCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAML 137
Y ++G V + R++F E+ ++ +SW M+SGY + A +L+ +++ WTA++
Sbjct: 88 YAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQSGLGKEAFRLY------SQMHWTAVI 141
Query: 138 MG-------YTQC--------GRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARV 182
+ C GR+ A +A ++ V + + L LG G + A
Sbjct: 142 PTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLG-FGSFKLAER 200
Query: 183 VFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLAS 242
VF M D T++ +I + + G+ + +F MQ G+R + ++ S+L+ CAS+
Sbjct: 201 VFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGD 260
Query: 243 LDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISG 302
L G+Q+H+ L++ D L+ +Y+KCG++ IF+ ++V+WN ++
Sbjct: 261 LQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVA 320
Query: 303 YAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEP 362
Y Q KS ++F +M ++G+ P+ T +L C+ TG+++ G +I S+ K E
Sbjct: 321 YGQISDLAKSFEIFGQMQATGIHPNQFTYPCILRTCTCTGQIELGEQI-HSLSIKNGFES 379
Query: 363 KTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKL 422
++D+ + G ++ A K++E + + D + W S++ H D E A
Sbjct: 380 DMYVSGVLIDMYSKYGCLDKARKILEMLE-KRDVVSWTSMIAGYVQH---DFCEEALATF 435
Query: 423 LQLE-----PKNAG 431
+++ P N G
Sbjct: 436 KEMQDCGVWPDNIG 449
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 124/246 (50%), Gaps = 12/246 (4%)
Query: 165 NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVR 224
N +I +NG V +AR VF ++ +D +W M+ Y + G E L++ M V
Sbjct: 82 NLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQSGLGKEAFRLYSQMHWTAVI 141
Query: 225 VNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLI 284
L SVLS C GR +HAQ+ + F + +V + LI +Y+ G + +
Sbjct: 142 PTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERV 201
Query: 285 FDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKV 344
F + D V +N++ISG+AQ G GE +L++F EM SG+ PD VT+ +L+AC+ G +
Sbjct: 202 FCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDL 261
Query: 345 KEGREIFE-----SMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIW 399
++G+++ M Y+ E ++DL + G +E A + + + ++W
Sbjct: 262 QKGKQLHSYLLKAGMSFDYITE------GSLLDLYVKCGDIETAHDIFN-LGDRTNVVLW 314
Query: 400 GSLLGA 405
+L A
Sbjct: 315 NLMLVA 320
>gi|357127622|ref|XP_003565478.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Brachypodium distachyon]
Length = 870
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 218/619 (35%), Positives = 346/619 (55%), Gaps = 24/619 (3%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM----PEKNVVSWTVMLGGFIRDSRIDDA 56
MP R+V+SW +M+ G G+ +A LF +M E + + +L +
Sbjct: 257 MPHRDVISWNSMISGCTSNGLYDKAIELFVRMWLEGEELDSATLLSVLPACAELHLLFLG 316
Query: 57 RRLFDMMPEKDVVAQTNM------VLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYV 110
R + + ++QT++ + C D R +IF M +KNV+SWT MI+ Y
Sbjct: 317 RVVHGYSVKTGFISQTSLANVLLDMYSNCSDWRSTN--KIFRNMVQKNVVSWTAMITSYT 374
Query: 111 NNNRIDVARKLFEVM----PEKNEVSWTAMLMGYT-----QCGRIQDAWELFKAMPMKSV 161
D LF+ M + + T+ L + + G+ + + M K +
Sbjct: 375 RAGLYDKVAGLFQEMGLEGTRPDIFAITSALHAFAGNELLKHGKSVHGYAIRNGME-KVL 433
Query: 162 VASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKE 221
+N+++ + G +++A+++FD + KD +W+ +I Y R E LFT M +
Sbjct: 434 AVTNALMEMYVKCGNMEEAKLIFDGVVSKDMISWNTLIGGYSRNNLANEAFSLFTEMLLQ 493
Query: 222 GVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKG 281
+R N ++ +L ASL+SL+ GR++HA +R + D +VA+ LI MY+KCG L+
Sbjct: 494 -LRPNAVTMTCILPAAASLSSLERGREMHAYALRRGYLEDDFVANALIDMYVKCGALLLA 552
Query: 282 KLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYT 341
+ +FD ++K+++ W +++GY +G G ++ +F +M SG+ PD + +L ACS++
Sbjct: 553 RRLFDRLSNKNLISWTIMVAGYGMHGRGRDAIALFEQMRVSGIAPDAASFSAILYACSHS 612
Query: 342 GKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGS 401
G EG F++M+ ++ +EP+ +HY CMVDLL G +++A + I++MP EPD+ IW S
Sbjct: 613 GLRDEGWRFFDAMRKEHKIEPRLKHYTCMVDLLINTGNLKEAYEFIDSMPIEPDSSIWVS 672
Query: 402 LLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNV 461
LL CR H + LAE A+++ +LEP+N G Y+LL+NIYA R+ V +L+ + R +
Sbjct: 673 LLRGCRIHRNVKLAEEVAERVFELEPENTGYYVLLANIYAEAERWEAVRKLKNKIGGRGL 732
Query: 462 IKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVD 521
+ GCSWIE + KVH+F D +HP+ I L ++ ++E G+ P + L D
Sbjct: 733 RENTGCSWIEAKGKVHVFIA-DNRNHPQGTRIAEFLNEVAKRMQEEGHDPKKKYALMGAD 791
Query: 522 EEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILR 581
+L HS KLAVA+G++ L EG IRV KN RVC CH A K ISK+ REIILR
Sbjct: 792 NAVHGEALCGHSSKLAVAFGVLNLSEGRLIRVTKNSRVCSHCHEAAKFISKMCSREIILR 851
Query: 582 DANRFHHFKDGLCSCRDYW 600
D+NRFHHF+ G CSCR YW
Sbjct: 852 DSNRFHHFEQGRCSCRGYW 870
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 138/534 (25%), Positives = 234/534 (43%), Gaps = 77/534 (14%)
Query: 1 MPE-RNVVSWTAMVRGYVEEGMITEAGTLFWQM------PEKNVVSWTV--MLG-GFIRD 50
MP+ +V WTA++ GY + G + E LF +M P+ +S + + G G I D
Sbjct: 155 MPQVSDVRVWTALMSGYAKAGDLREGVLLFRKMHCCGVRPDAYTISCVLKCIAGLGSIED 214
Query: 51 SRIDDARRLFDMMPEKDVVAQTNMVLG-YCQDGRVDEGREIFDEMPKKNVISWTTMISGY 109
+ L + + A N ++ Y + R + +FD MP ++VISW +MISG
Sbjct: 215 GEV--VHGLLEKLGFGSQCAVGNALMAFYAKSNRTKDAILVFDGMPHRDVISWNSMISGC 272
Query: 110 VNNNRIDVARKLFEVM-PEKNEVSWTAMLMGYTQC--------GRIQDAWELFKAMPMKS 160
+N D A +LF M E E+ +L C GR+ + + ++
Sbjct: 273 TSNGLYDKAIELFVRMWLEGEELDSATLLSVLPACAELHLLFLGRVVHGYSVKTGFISQT 332
Query: 161 VVASNSMILGLGQN-GEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQ 219
+A +++L + N + + +F M +K+ +W+ MI Y R G +V LF M
Sbjct: 333 SLA--NVLLDMYSNCSDWRSTNKIFRNMVQKNVVSWTAMITSYTRAGLYDKVAGLFQEMG 390
Query: 220 KEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELV 279
EG R + ++ S L A L HG+ VH +R + + V + L+ MY+KCG +
Sbjct: 391 LEGTRPDIFAITSALHAFAGNELLKHGKSVHGYAIRNGMEKVLAVTNALMEMYVKCGNME 450
Query: 280 KGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACS 339
+ KLIFD SKD++ WN++I GY++ L ++ +F EM + P+ VT+ +L A +
Sbjct: 451 EAKLIFDGVVSKDMISWNTLIGGYSRNNLANEAFSLFTEMLLQ-LRPNAVTMTCILPAAA 509
Query: 340 YTGKVKEGRE-----------------------------------IFESMKSKYLVEPKT 364
++ GRE +F+ + +K L+
Sbjct: 510 SLSSLERGREMHAYALRRGYLEDDFVANALIDMYVKCGALLLARRLFDRLSNKNLIS--- 566
Query: 365 EHYACMVDLLGRAGQVEDAMKLIEAM---PFEPDAIIWGSLLGACRTHMKLDLAEV---A 418
+ MV G G+ DA+ L E M PDA + ++L AC D A
Sbjct: 567 --WTIMVAGYGMHGRGRDAIALFEQMRVSGIAPDAASFSAILYACSHSGLRDEGWRFFDA 624
Query: 419 AKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEV 472
+K ++EP+ Y + ++ + G + E +M I+P W+ +
Sbjct: 625 MRKEHKIEPR-LKHYTCMVDLLINTGNLKEAYEFIDSM----PIEPDSSIWVSL 673
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 106/374 (28%), Positives = 172/374 (45%), Gaps = 16/374 (4%)
Query: 67 DVVAQTNMVLGYCQDGRVDEGREIFDEMPK-KNVISWTTMISGYVNNNRIDVARKLFEVM 125
D V +VL Y + G ++ R +FDEMP+ +V WT ++SGY + LF M
Sbjct: 128 DNVLGQKLVLMYLKCGDLENARRVFDEMPQVSDVRVWTALMSGYAKAGDLREGVLLFRKM 187
Query: 126 ------PEKNEVSWTAMLMGYTQCGRIQDA---WELFKAMPMKSVVA-SNSMILGLGQNG 175
P+ +S +L G I+D L + + S A N+++ ++
Sbjct: 188 HCCGVRPDAYTIS--CVLKCIAGLGSIEDGEVVHGLLEKLGFGSQCAVGNALMAFYAKSN 245
Query: 176 EVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLS 235
+ A +VFD M +D +W+ MI G + I+LF M EG ++ +L+SVL
Sbjct: 246 RTKDAILVFDGMPHRDVISWNSMISGCTSNGLYDKAIELFVRMWLEGEELDSATLLSVLP 305
Query: 236 VCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVM 295
CA L L GR VH V+ F +A+VL+ MY C + IF N K++V
Sbjct: 306 ACAELHLLFLGRVVHGYSVKTGFISQTSLANVLLDMYSNCSDWRSTNKIFRNMVQKNVVS 365
Query: 296 WNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMK 355
W ++I+ Y + GL +K +F EM G PD + L A + +K G+ +
Sbjct: 366 WTAMITSYTRAGLYDKVAGLFQEMGLEGTRPDIFAITSALHAFAGNELLKHGKSV-HGYA 424
Query: 356 SKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA-CRTHMKLDL 414
+ +E ++++ + G +E+A KLI D I W +L+G R ++ +
Sbjct: 425 IRNGMEKVLAVTNALMEMYVKCGNMEEA-KLIFDGVVSKDMISWNTLIGGYSRNNLANEA 483
Query: 415 AEVAAKKLLQLEPK 428
+ + LLQL P
Sbjct: 484 FSLFTEMLLQLRPN 497
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 108/222 (48%), Gaps = 20/222 (9%)
Query: 232 SVLSVCASLASLDHGRQVHAQLVRCQF----DVDVYVASVLITMYIKCGELVKGKLIFDN 287
+VL +C+ + SL+ G++ H LVR +D + L+ MY+KCG+L + +FD
Sbjct: 96 AVLQLCSEVRSLEGGKRAHF-LVRASSLGRDGMDNVLGQKLVLMYLKCGDLENARRVFDE 154
Query: 288 FAS-KDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKE 346
D+ +W +++SGYA+ G + + +F +M GV PD T+ VL + G +++
Sbjct: 155 MPQVSDVRVWTALMSGYAKAGDLREGVLLFRKMHCCGVRPDAYTISCVLKCIAGLGSIED 214
Query: 347 GREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGAC 406
G E+ + K + ++ ++ + +DA+ + + MP D I W S++ C
Sbjct: 215 G-EVVHGLLEKLGFGSQCAVGNALMAFYAKSNRTKDAILVFDGMPHR-DVISWNSMISGC 272
Query: 407 RTH------------MKLDLAEVAAKKLLQLEPKNAGPYILL 436
++ M L+ E+ + LL + P A ++L
Sbjct: 273 TSNGLYDKAIELFVRMWLEGEELDSATLLSVLPACAELHLLF 314
>gi|297745420|emb|CBI40500.3| unnamed protein product [Vitis vinifera]
Length = 1133
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 219/592 (36%), Positives = 323/592 (54%), Gaps = 45/592 (7%)
Query: 22 ITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMV------ 75
+ +A +F +MP + W + ++ ++ LF M + A+T +
Sbjct: 574 LEKANQVFHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQA 633
Query: 76 ----LGYCQDGRVDEG---REIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEK 128
LG+ G+ G R FD +V T++I YV N+ + A+ +F+ M +
Sbjct: 634 SISELGFLNMGKETHGYVLRNGFD----CDVYVGTSLIDMYVKNHSLTSAQAVFDNMKNR 689
Query: 129 NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMR 188
N +W +++ GY+ G +DA L M + +
Sbjct: 690 NIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGI--------------------------- 722
Query: 189 EKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQ 248
+ D TW+GMI Y G E + F MQ+EGV N S+ +L CASL+ L G++
Sbjct: 723 KPDLVTWNGMISGYAMWGCGKEALAFFAQMQQEGVMPNSASITCLLRACASLSLLQKGKE 782
Query: 249 VHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGL 308
+H +R F DV+VA+ LI MY K L +F +K + WN +I G+A +GL
Sbjct: 783 IHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRRIQNKTLASWNCMIMGFAIFGL 842
Query: 309 GEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYA 368
G++++ VF+EM GV PD +T +LSAC +G + EG + F+SM + Y + P+ EHY
Sbjct: 843 GKEAISVFNEMQKVGVGPDAITFTALLSACKNSGLIGEGWKYFDSMITDYRIVPRLEHYC 902
Query: 369 CMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPK 428
CMVDLLGRAG +++A LI MP +PDA IWG+LLG+CR H L AE AAK L +LEP
Sbjct: 903 CMVDLLGRAGYLDEAWDLIHTMPLKPDATIWGALLGSCRIHKNLKFAETAAKNLFKLEPN 962
Query: 429 NAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHP 488
N+ YIL+ N+Y+ R+ D+ LR+ M V SWI++ ++VH+F+ D HP
Sbjct: 963 NSANYILMMNLYSIFNRWEDMDHLRELMGAAGVRNRQVWSWIQINQRVHVFSS-DEKPHP 1021
Query: 489 EHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEG 548
+ I L ++ +++ GY PD + V ++DE EK L H+EKLA+ YGL+K+ G
Sbjct: 1022 DAGKIYFELYQLVSEMKKLGYVPDVNCVYQNMDEVEKQKILLSHTEKLAITYGLIKMKAG 1081
Query: 549 VPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
PIRV+KN R+C DCHSA K IS V RE+ LRD RFHHF++G CSC D+W
Sbjct: 1082 EPIRVIKNTRICSDCHSAAKYISLVKARELFLRDGVRFHHFREGKCSCNDFW 1133
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 114/238 (47%), Gaps = 33/238 (13%)
Query: 135 AMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDAT 194
A++ Y +C ++ A ++F MP + N I+ Q+ ++QK
Sbjct: 563 ALMNFYGRCWGLEKANQVFHEMPNPEALLWNEAIILNLQSEKLQKG-------------- 608
Query: 195 WSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCAS-LASLDHGRQVHAQL 253
++LF MQ ++ +++ VL S L L+ G++ H +
Sbjct: 609 -----------------VELFRKMQFSFLKAETATIVRVLQASISELGFLNMGKETHGYV 651
Query: 254 VRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSL 313
+R FD DVYV + LI MY+K L + +FDN +++I WNS++SGY+ G+ E +L
Sbjct: 652 LRNGFDCDVYVGTSLIDMYVKNHSLTSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDAL 711
Query: 314 KVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMV 371
++ ++M G+ PD VT G++S + G KE F M+ + V P + C++
Sbjct: 712 RLLNQMEKEGIKPDLVTWNGMISGYAMWGCGKEALAFFAQMQQEG-VMPNSASITCLL 768
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 103/245 (42%), Gaps = 35/245 (14%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVV 69
T+++ YV+ +T A +F M +N+ +W ++ G+ +DA RL + M ++ +
Sbjct: 664 TSLIDMYVKNHSLTSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGI- 722
Query: 70 AQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEK- 128
K ++++W MISGY A F M ++
Sbjct: 723 --------------------------KPDLVTWNGMISGYAMWGCGKEALAFFAQMQQEG 756
Query: 129 ---NEVSWTAMLMGYTQCGRIQDAWEL----FKAMPMKSVVASNSMILGLGQNGEVQKAR 181
N S T +L +Q E+ + ++ V + ++I ++ ++ A
Sbjct: 757 VMPNSASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAH 816
Query: 182 VVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLA 241
VF +++ K A+W+ MI + G E I +F MQK GV + + ++LS C +
Sbjct: 817 KVFRRIQNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACKNSG 876
Query: 242 SLDHG 246
+ G
Sbjct: 877 LIGEG 881
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/284 (20%), Positives = 116/284 (40%), Gaps = 45/284 (15%)
Query: 162 VASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELE-VIDLFTLMQK 220
A+ ++I G+ A +VF ++ W+ ++ ++ L V+++F +
Sbjct: 457 AAAKNLISSYLGFGDFWSAAMVFYVGLPRNYLKWNSFVEEFKSSAGSLHIVLEVFKELHG 516
Query: 221 EGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVK 280
+GV + L C + + G ++H L++ FD+DVY+ L+ Y +C L K
Sbjct: 517 KGVVFDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEK 576
Query: 281 GKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSAC-S 339
+F + + ++WN I Q +K +++F +M S + + T+V VL A S
Sbjct: 577 ANQVFHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQASIS 636
Query: 340 YTGKVKEGRE-----------------------------------IFESMKSKYLVEPKT 364
G + G+E +F++MK++ +
Sbjct: 637 ELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLTSAQAVFDNMKNRNIFA--- 693
Query: 365 EHYACMVDLLGRAGQVEDAMKLIEAMPFE---PDAIIWGSLLGA 405
+ +V G EDA++L+ M E PD + W ++
Sbjct: 694 --WNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISG 735
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/306 (20%), Positives = 122/306 (39%), Gaps = 59/306 (19%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEK----NVVSWTVMLGGFIRDSRIDDA 56
M RN+ +W ++V GY +GM +A L QM ++ ++V+W M+ G+ +A
Sbjct: 686 MKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCGKEA 745
Query: 57 RRLFDMMPE---------------------------------------KDVVAQTNMVLG 77
F M + +DV T ++
Sbjct: 746 LAFFAQMQQEGVMPNSASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDM 805
Query: 78 YCQDGRVDEGREIFDEMPKKNVISWTTMISGY----VNNNRIDVARKLFEVMPEKNEVSW 133
Y + + ++F + K + SW MI G+ + I V ++ +V + +++
Sbjct: 806 YSKSSSLKNAHKVFRRIQNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITF 865
Query: 134 TAMLMGYTQCGRIQDAWELFKAMPMKSVVASN-----SMILGLGQNGEVQKARVVFDQMR 188
TA+L G I + W+ F +M + M+ LG+ G + +A + M
Sbjct: 866 TALLSACKNSGLIGEGWKYFDSMITDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIHTMP 925
Query: 189 EKDDAT-WSGMI---KVYER-KGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASL 243
K DAT W ++ ++++ K E +LF L N+ ++++ S+ +
Sbjct: 926 LKPDATIWGALLGSCRIHKNLKFAETAAKNLFKLEPNNS--ANYILMMNLYSIFNRWEDM 983
Query: 244 DHGRQV 249
DH R++
Sbjct: 984 DHLREL 989
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 74/161 (45%), Gaps = 7/161 (4%)
Query: 244 DHG-RQVHAQLVRC--QFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSII 300
+HG + +HAQ+++ +++ D A LI+ Y+ G+ ++F ++ + WNS +
Sbjct: 436 EHGIKMMHAQMIKLPQKWNPDA-AAKNLISSYLGFGDFWSAAMVFYVGLPRNYLKWNSFV 494
Query: 301 SGY-AQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYL 359
+ + G L+VF E+ GV+ D L C+ + G EI + +
Sbjct: 495 EEFKSSAGSLHIVLEVFKELHGKGVVFDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGF 554
Query: 360 VEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWG 400
+ +++ GR +E A ++ MP P+A++W
Sbjct: 555 -DLDVYLRCALMNFYGRCWGLEKANQVFHEMP-NPEALLWN 593
>gi|357131283|ref|XP_003567268.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Brachypodium distachyon]
Length = 654
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 222/562 (39%), Positives = 326/562 (58%), Gaps = 21/562 (3%)
Query: 57 RRL-FDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRI 115
RRL D + D T ++ Y G + R++FDE P KN+ W ++ +
Sbjct: 96 RRLEADPVFRSDPFLSTRLIEAYAALGALPAARQVFDETPVKNIFVWNALLKALALADHG 155
Query: 116 DVA-RKLFEVMPEKNEVSWTAMLMGYTQC-----------GRIQD--AWELFKAMPMKSV 161
D A +L ++ V + G C R+++ A + + + +
Sbjct: 156 DEALARLADMGRLGVPVDSYSYTHGLKACIAVSASHAPASARVREVHAHAIRRGYALHTH 215
Query: 162 VASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKE 221
VA+ ++I + G V+ A VF M E++ +WS MI Y + + I+LF M
Sbjct: 216 VAT-TLIDCYAKLGIVRYAESVFAAMPERNVVSWSAMIGCYAKNERPADAIELFKDMMAS 274
Query: 222 GVRV--NFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELV 279
+ N +++SVL+ CA + +L HG+ +HA ++R FD V V + L+ MY++CG L
Sbjct: 275 DADLVPNSITIVSVLNACAGVNALSHGKLLHAYILRRGFDSLVSVLNALMAMYMRCGCLE 334
Query: 280 KGKLIFDNFASK-DIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSAC 338
G+ IF + D+V WNS+ISGY +G G ++++VF EM G P +T + VL AC
Sbjct: 335 VGRHIFKWIGHRRDVVSWNSLISGYGMHGFGPEAVQVFEEMIHVGFSPSIITFISVLGAC 394
Query: 339 SYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAII 398
S+ G V EG+ +FESM +Y V P+ EHYACMVDLLGRAGQ+++AM+LI +M EP +
Sbjct: 395 SHAGLVNEGKMLFESM-VEYGVTPRAEHYACMVDLLGRAGQLDEAMELIRSMHIEPSPQV 453
Query: 399 WGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRK 458
WG+LLGACR H ++ AE+A L LEP+NAG Y+LL++IYA + V L++ + +
Sbjct: 454 WGALLGACRIHGHVEYAEIACSHLFDLEPRNAGNYVLLADIYARAKLHNQVGVLKELLEE 513
Query: 459 RNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLH 518
+ K GCSWIEV+KK+H FT D +P + ++ + ++ GY PD+ VL+
Sbjct: 514 HALEKVTGCSWIEVKKKLHSFTSVD-NKNPPVEQLQALIGEFVAQMKNQGYVPDTGIVLY 572
Query: 519 DVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREI 578
D++ EEK L HSEKLAVA+GL+ G IR+ KNLR+C DCHS K ISK REI
Sbjct: 573 DIEGEEKERILIGHSEKLAVAFGLINTCSGEVIRITKNLRLCEDCHSVTKFISKFTEREI 632
Query: 579 ILRDANRFHHFKDGLCSCRDYW 600
++RD NRFHHF+DG+CSC DYW
Sbjct: 633 VVRDVNRFHHFRDGVCSCGDYW 654
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 113/231 (48%), Gaps = 19/231 (8%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF-DMMP-EKD 67
T ++ Y + G++ A ++F MPE+NVVSW+ M+G + ++ R DA LF DMM + D
Sbjct: 218 TTLIDCYAKLGIVRYAESVFAAMPERNVVSWSAMIGCYAKNERPADAIELFKDMMASDAD 277
Query: 68 VVAQTNM---VLGYCQD-GRVDEGREIFDEMPKKNVISWTTMISG----YVNNNRIDVAR 119
+V + VL C + G+ + + ++ S ++++ Y+ ++V R
Sbjct: 278 LVPNSITIVSVLNACAGVNALSHGKLLHAYILRRGFDSLVSVLNALMAMYMRCGCLEVGR 337
Query: 120 KLFEVMPEKNE-VSWTAMLMGYTQCGRIQDAWELFKAMPM----KSVVASNSMILGLGQN 174
+F+ + + + VSW +++ GY G +A ++F+ M S++ S++
Sbjct: 338 HIFKWIGHRRDVVSWNSLISGYGMHGFGPEAVQVFEEMIHVGFSPSIITFISVLGACSHA 397
Query: 175 GEVQKARVVFDQMRE----KDDATWSGMIKVYERKGYELEVIDLFTLMQKE 221
G V + +++F+ M E ++ M+ + R G E ++L M E
Sbjct: 398 GLVNEGKMLFESMVEYGVTPRAEHYACMVDLLGRAGQLDEAMELIRSMHIE 448
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 110/246 (44%), Gaps = 34/246 (13%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM--PEKNVVSWTVMLGGFIRDSRIDDA-- 56
MPERNVVSW+AM+ Y + +A LF M + ++V ++ + + +A
Sbjct: 240 MPERNVVSWSAMIGCYAKNERPADAIELFKDMMASDADLVPNSITIVSVLNACAGVNALS 299
Query: 57 ----------RRLFDMMPEKDVVAQTNMVLG-YCQDGRVDEGREIFDEM-PKKNVISWTT 104
RR FD +V+ N ++ Y + G ++ GR IF + +++V+SW +
Sbjct: 300 HGKLLHAYILRRGFD-----SLVSVLNALMAMYMRCGCLEVGRHIFKWIGHRRDVVSWNS 354
Query: 105 MISGYVNNNRIDVARKLFEVMPE----KNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKS 160
+ISGY + A ++FE M + +++ ++L + G + + LF++M
Sbjct: 355 LISGYGMHGFGPEAVQVFEEMIHVGFSPSIITFISVLGACSHAGLVNEGKMLFESMVEYG 414
Query: 161 VVASNS----MILGLGQNGEVQKARVVFDQMR-EKDDATWSGMIKVYERKGY----ELEV 211
V M+ LG+ G++ +A + M E W ++ G+ E+
Sbjct: 415 VTPRAEHYACMVDLLGRAGQLDEAMELIRSMHIEPSPQVWGALLGACRIHGHVEYAEIAC 474
Query: 212 IDLFTL 217
LF L
Sbjct: 475 SHLFDL 480
>gi|115434844|ref|NP_001042180.1| Os01g0176300 [Oryza sativa Japonica Group]
gi|11034538|dbj|BAB17062.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113531711|dbj|BAF04094.1| Os01g0176300 [Oryza sativa Japonica Group]
gi|125569234|gb|EAZ10749.1| hypothetical protein OsJ_00586 [Oryza sativa Japonica Group]
Length = 665
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 200/467 (42%), Positives = 300/467 (64%), Gaps = 1/467 (0%)
Query: 134 TAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDA 193
A++ Y +CG + AW LF+ M M+S+ + S+I GL ++G+V +AR +FD M E+D
Sbjct: 200 NALVDMYAECGDMDAAWVLFEGMQMRSMASWTSVISGLVRSGQVDRARDLFDHMPERDTI 259
Query: 194 TWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQL 253
W+ MI Y + G + ++ F MQ VR + +++SV++ CA L +L+ G +
Sbjct: 260 AWTAMIDGYVQVGRFRDALETFRYMQICKVRADEFTMVSVVTACAQLGALETGEWARIYM 319
Query: 254 VRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSL 313
R +DV+V + LI MY KCG + + +F + ++D W +II G A G GE+++
Sbjct: 320 GRLGIKMDVFVGNALIDMYSKCGSIERALDVFKDMHNRDKFTWTAIILGLAVNGRGEEAI 379
Query: 314 KVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDL 373
+F+ M + PD+VT VGVL+AC++ G V +GRE F SM Y + P HY C++D+
Sbjct: 380 DMFYRMLRALQTPDEVTFVGVLTACTHAGLVDKGREFFLSMTEAYNISPTVVHYGCLIDV 439
Query: 374 LGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPY 433
LGRAG++++A+ I+ MP +P++ IWG+LL +CR + ++ E+AA++LL+L+P N+ Y
Sbjct: 440 LGRAGKLKEALDTIDKMPMKPNSTIWGTLLASCRVYGNSEIGELAAERLLELDPDNSTAY 499
Query: 434 ILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMI 493
ILLSN+YA R+ DV +R+ + ++ + K PGCS IE+ +H F D SHP + I
Sbjct: 500 ILLSNMYAKSNRWKDVRRIRQIIMEKGIKKEPGCSMIEMNGIIHEFVAAD-RSHPMNKEI 558
Query: 494 MRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRV 553
LE + LR AGY PD + VL +V EEEK L +HSEKLAV + L+ V IR+
Sbjct: 559 YSKLENVLTDLRNAGYVPDVTEVLVEVTEEEKQKVLYWHSEKLAVTFALLTSESNVIIRI 618
Query: 554 MKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
+KNLR+C DCH+AIKLISK+ GRE+I+RD RFHHF+ G CSC+DYW
Sbjct: 619 VKNLRMCLDCHNAIKLISKLYGREVIVRDRTRFHHFRHGSCSCKDYW 665
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 87/339 (25%), Positives = 147/339 (43%), Gaps = 66/339 (19%)
Query: 42 VMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVIS 101
V+ G + D R+++A L DM Y + G +D +F+ M +++ S
Sbjct: 187 VLESGVLPDQRVENA--LVDM---------------YAECGDMDAAWVLFEGMQMRSMAS 229
Query: 102 WTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAM----- 156
WT++ISG V + ++D AR LF+ MPE++ ++WTAM+ GY Q GR +DA E F+ M
Sbjct: 230 WTSVISGLVRSGQVDRARDLFDHMPERDTIAWTAMIDGYVQVGRFRDALETFRYMQICKV 289
Query: 157 -----PMKSVVAS-----------------------------NSMILGLGQNGEVQKARV 182
M SVV + N++I + G +++A
Sbjct: 290 RADEFTMVSVVTACAQLGALETGEWARIYMGRLGIKMDVFVGNALIDMYSKCGSIERALD 349
Query: 183 VFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLAS 242
VF M +D TW+ +I G E ID+F M + + + + VL+ C
Sbjct: 350 VFKDMHNRDKFTWTAIILGLAVNGRGEEAIDMFYRMLRALQTPDEVTFVGVLTACTHAGL 409
Query: 243 LDHGRQVHAQLVRC-QFDVDVYVASVLITMYIKCGELVKGKLIFDNFASK-DIVMWNSII 300
+D GR+ + V LI + + G+L + D K + +W +++
Sbjct: 410 VDKGREFFLSMTEAYNISPTVVHYGCLIDVLGRAGKLKEALDTIDKMPMKPNSTIWGTLL 469
Query: 301 SGYAQYG---LGEKSLKVFHEMFSSGVMPDDVTLVGVLS 336
+ YG +GE + + E+ PD+ T +LS
Sbjct: 470 ASCRVYGNSEIGELAAERLLELD-----PDNSTAYILLS 503
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 144/323 (44%), Gaps = 56/323 (17%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
+P++ V + A+V Y E G + A LF M +++ SWT ++ G +R ++D AR LF
Sbjct: 193 LPDQRVEN--ALVDMYAECGDMDAAWVLFEGMQMRSMASWTSVISGLVRSGQVDRARDLF 250
Query: 61 DMMPEKDVVAQTNMVLGYCQDGRVDEGREIF----------DEMPKKNVIS--------- 101
D MPE+D +A T M+ GY Q GR + E F DE +V++
Sbjct: 251 DHMPERDTIAWTAMIDGYVQVGRFRDALETFRYMQICKVRADEFTMVSVVTACAQLGALE 310
Query: 102 ---WTTMISG--------YVNNNRIDVARK---------LFEVMPEKNEVSWTAMLMGYT 141
W + G +V N ID+ K +F+ M +++ +WTA+++G
Sbjct: 311 TGEWARIYMGRLGIKMDVFVGNALIDMYSKCGSIERALDVFKDMHNRDKFTWTAIILGLA 370
Query: 142 QCGRIQDAWELF----KAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDAT--- 194
GR ++A ++F +A+ V ++ G V K R F M E + +
Sbjct: 371 VNGRGEEAIDMFYRMLRALQTPDEVTFVGVLTACTHAGLVDKGREFFLSMTEAYNISPTV 430
Query: 195 --WSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQ 252
+ +I V R G E +D + K ++ N ++L+ C + + G +
Sbjct: 431 VHYGCLIDVLGRAGKLKEALD---TIDKMPMKPNSTIWGTLLASCRVYGNSEIGELAAER 487
Query: 253 LVRCQFDVDVYVASVLIT-MYIK 274
L+ + D D A +L++ MY K
Sbjct: 488 LL--ELDPDNSTAYILLSNMYAK 508
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 100/241 (41%), Gaps = 35/241 (14%)
Query: 195 WSGMIKVYERKG-YELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQL 253
W+ +I + R G +EL F M + + +SVLS C L G QVH ++
Sbjct: 129 WNALISGHNRSGRFELSCCS-FVDMVRASAMATAVTYVSVLSACGKGKDLLLGMQVHKRV 187
Query: 254 VRCQFDVDVYVASVLITMYIKCGEL-------------------------------VKGK 282
+ D V + L+ MY +CG++ + +
Sbjct: 188 LESGVLPDQRVENALVDMYAECGDMDAAWVLFEGMQMRSMASWTSVISGLVRSGQVDRAR 247
Query: 283 LIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTG 342
+FD+ +D + W ++I GY Q G +L+ F M V D+ T+V V++AC+ G
Sbjct: 248 DLFDHMPERDTIAWTAMIDGYVQVGRFRDALETFRYMQICKVRADEFTMVSVVTACAQLG 307
Query: 343 KVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSL 402
++ G E + ++ ++D+ + G +E A+ + + M D W ++
Sbjct: 308 ALETG-EWARIYMGRLGIKMDVFVGNALIDMYSKCGSIERALDVFKDM-HNRDKFTWTAI 365
Query: 403 L 403
+
Sbjct: 366 I 366
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 97/215 (45%), Gaps = 13/215 (6%)
Query: 249 VHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNF----ASKDIVMWNSIISGYA 304
+HA +V+ + + + AS LI MY G+ + + + VMWN++ISG+
Sbjct: 78 IHAHVVKFGMESNAHAASSLIVMYAARGDGAAARAVLEAACLATGGGAPVMWNALISGHN 137
Query: 305 QYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFES-MKSKYLVEPK 363
+ G E S F +M + M VT V VLSAC + G ++ + ++S L + +
Sbjct: 138 RSGRFELSCCSFVDMVRASAMATAVTYVSVLSACGKGKDLLLGMQVHKRVLESGVLPDQR 197
Query: 364 TEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLL 423
E+ +VD+ G ++ A L E M A W S++ ++D A+ L
Sbjct: 198 VEN--ALVDMYAECGDMDAAWVLFEGMQMRSMA-SWTSVISGLVRSGQVD----RARDLF 250
Query: 424 QLEP-KNAGPYILLSNIYASQGRFHDVAELRKNMR 457
P ++ + + + Y GRF D E + M+
Sbjct: 251 DHMPERDTIAWTAMIDGYVQVGRFRDALETFRYMQ 285
>gi|449433131|ref|XP_004134351.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Cucumis sativus]
Length = 895
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 215/641 (33%), Positives = 354/641 (55%), Gaps = 46/641 (7%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF-DMM 63
+V+ ++ Y + + EA +F +M K+ V+W M+ G+ + R + + +LF DM+
Sbjct: 256 DVIIGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDMI 315
Query: 64 PE--KDVVAQTNMVLGYCQDGRVDEGREIFDEMPKK----NVISWTTMISGYVNNNRIDV 117
D+++ T+ + Q G + G+ + + + ++ +I Y +
Sbjct: 316 DGFVPDMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLA 375
Query: 118 ARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMK------------------ 159
A+++F+ K+ V+W +++ GYTQ G ++ E FK M M+
Sbjct: 376 AQEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLESFKMMKMERKPDSVTFVLLLSIFSQL 435
Query: 160 --------------------SVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMI 199
++ NS++ + GE+ VF M D +W+ +I
Sbjct: 436 ADINQGRGIHCDVIKFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSAHDIISWNTVI 495
Query: 200 KVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFD 259
+ M+ EG+ + +++ +L +C+ LA G+++H + + F+
Sbjct: 496 ASSVHFDDCTVGFQMINEMRTEGLMPDEATVLGILPMCSLLAVRRQGKEIHGYIFKSGFE 555
Query: 260 VDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEM 319
+V + + LI MY KCG L +F KD+V W ++IS + YG G+K+LK F +M
Sbjct: 556 SNVPIGNALIEMYSKCGSLENCIKVFKYMKEKDVVTWTALISAFGMYGEGKKALKAFQDM 615
Query: 320 FSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQ 379
SGV+PD V + + ACS++G VKEG F+ MK+ Y +EP+ EHYAC+VDLL R+G
Sbjct: 616 ELSGVLPDSVAFIAFIFACSHSGMVKEGLRFFDRMKTDYNLEPRMEHYACVVDLLARSGL 675
Query: 380 VEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNI 439
+ A + I +MP +PDA +WG+LL ACR ++A+ +KK+L+L + G Y+L+SNI
Sbjct: 676 LAQAEEFILSMPMKPDASLWGALLSACRARGNTNIAQRVSKKILELNSDDTGYYVLVSNI 735
Query: 440 YASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEK 499
YA+ G++ V +R +M+ + + K PG SWIE++K+V++F D S ++ + +LE
Sbjct: 736 YATLGKWDQVKTVRNSMKTKGLKKEPGSSWIEIQKRVYVFRTGD-KSFEQYDKVKDLLEY 794
Query: 500 IGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRV 559
+ L+ + GY D F LHDV+E++K L HSE+LA+A+GL+ G P+ VMKNLRV
Sbjct: 795 LVRLMAKEGYVADLQFALHDVEEDDKRDMLCGHSERLAIAFGLLNTKPGSPLLVMKNLRV 854
Query: 560 CGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
CGDCH+ K I+K+M REI++RDANRFH FKDG CSC D+W
Sbjct: 855 CGDCHTVTKYITKIMQREILVRDANRFHRFKDGACSCGDHW 895
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 106/421 (25%), Positives = 212/421 (50%), Gaps = 20/421 (4%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQ------MPEKNVVSWTVMLGGFIRDSRID 54
M R+ VSW +++ GY G +A ++ + +P+ +S ++ G + +
Sbjct: 182 MSNRDSVSWNSLISGYCSNGFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEG 241
Query: 55 DARR--LFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
A + + DV+ ++ Y + R+ E R +F +M K+ ++W TMI GY
Sbjct: 242 VAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQL 301
Query: 113 NRIDVARKLFEVMPE---KNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKS----VVASN 165
R + + KLF M + + +S T+ + Q G +Q + K + VA N
Sbjct: 302 GRHEASVKLFMDMIDGFVPDMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVACN 361
Query: 166 SMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRV 225
+I + G++ A+ VFD + KD TW+ +I Y + GY E ++ F +M+ E +
Sbjct: 362 ILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLESFKMMKMER-KP 420
Query: 226 NFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIF 285
+ + + +LS+ + LA ++ GR +H +++ F+ ++ + + L+ +Y KCGE+ +F
Sbjct: 421 DSVTFVLLLSIFSQLADINQGRGIHCDVIKFGFEAELIIGNSLLDVYAKCGEMDDLLKVF 480
Query: 286 DNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVK 345
++ DI+ WN++I+ + ++ +EM + G+MPD+ T++G+L CS +
Sbjct: 481 SYMSAHDIISWNTVIASSVHFDDCTVGFQMINEMRTEGLMPDEATVLGILPMCSLLAVRR 540
Query: 346 EGREIFESM-KSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLG 404
+G+EI + KS + E ++++ + G +E+ +K+ + M E D + W +L+
Sbjct: 541 QGKEIHGYIFKSGF--ESNVPIGNALIEMYSKCGSLENCIKVFKYMK-EKDVVTWTALIS 597
Query: 405 A 405
A
Sbjct: 598 A 598
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 117/437 (26%), Positives = 199/437 (45%), Gaps = 54/437 (12%)
Query: 2 PERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFD 61
P NV W +++R G+ T+A + +M EK + F S I+ R+ D
Sbjct: 82 PTNNVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQP-----DAFTFPSVINSCARILD 136
Query: 62 -------------MMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISG 108
M E D+ ++ Y + +D R +F+EM ++ +SW ++ISG
Sbjct: 137 LELGCIVHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISG 196
Query: 109 YVNN----NRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVAS 164
Y +N + +D+ K + + +++L+ CG + M +K VA
Sbjct: 197 YCSNGFWEDALDMYHKFRMTGMVPDCFTMSSVLLA---CGSL---------MAVKEGVAV 244
Query: 165 NSMILGLGQNGEV----------------QKARVVFDQMREKDDATWSGMIKVYERKGYE 208
+ +I +G G+V ++AR VF +M KD TW+ MI Y + G
Sbjct: 245 HGVIEKIGIAGDVIIGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRH 304
Query: 209 LEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVL 268
+ LF M +G + S+ S + C L G+ VH L+ F+ D ++L
Sbjct: 305 EASVKLFMDMI-DGFVPDMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVACNIL 363
Query: 269 ITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDD 328
I MY KCG+L+ + +FD KD V WNS+I+GY Q G ++ L+ F +M PD
Sbjct: 364 IDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLESF-KMMKMERKPDS 422
Query: 329 VTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIE 388
VT V +LS S + +GR I + K+ E + ++D+ + G+++D +K+
Sbjct: 423 VTFVLLLSIFSQLADINQGRGIHCDV-IKFGFEAELIIGNSLLDVYAKCGEMDDLLKVFS 481
Query: 389 AMPFEPDAIIWGSLLGA 405
M D I W +++ +
Sbjct: 482 YMS-AHDIISWNTVIAS 497
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 97/373 (26%), Positives = 182/373 (48%), Gaps = 34/373 (9%)
Query: 95 PKKNVISWTTMISGYVNNNRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAW 150
P NV W ++I +N A + M EK + ++ +++ C RI D
Sbjct: 82 PTNNVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVI---NSCARILD-L 137
Query: 151 ELF-----KAMPM---KSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVY 202
EL AM M + N++I + ++ AR VF++M +D +W+ +I Y
Sbjct: 138 ELGCIVHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGY 197
Query: 203 ERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDV 262
G+ + +D++ + G+ + ++ SVL C SL ++ G VH + + DV
Sbjct: 198 CSNGFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDV 257
Query: 263 YVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSS 322
+ + L++MY K L + + +F A KD V WN++I GYAQ G E S+K+F +M
Sbjct: 258 IIGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDMI-D 316
Query: 323 GVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTE--HYAC--MVDLLGRAG 378
G +PD +++ + AC +G ++ G+ + KYL+ E AC ++D+ + G
Sbjct: 317 GFVPDMLSITSTIRACGQSGDLQVGKFV-----HKYLIGSGFECDTVACNILIDMYAKCG 371
Query: 379 QVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPK-NAGPYILLS 437
+ A ++ + + D++ W SL+ T + + K++++E K ++ ++LL
Sbjct: 372 DLLAAQEVFDTTKCK-DSVTWNSLING-YTQSGYYKEGLESFKMMKMERKPDSVTFVLLL 429
Query: 438 NIYA-----SQGR 445
+I++ +QGR
Sbjct: 430 SIFSQLADINQGR 442
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 100/189 (52%), Gaps = 1/189 (0%)
Query: 160 SVVASNSMILGLGQNGEVQKARVVFDQMREKDDA-TWSGMIKVYERKGYELEVIDLFTLM 218
SV+ S +I Q + + VF + ++ W+ +I+ G + + +T M
Sbjct: 53 SVIFSGKLISKYAQVKDPISSVSVFRSISPTNNVYLWNSIIRALTHNGLFTQALGYYTEM 112
Query: 219 QKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGEL 278
+++ ++ + + SV++ CA + L+ G VH + F+ D+Y+ + LI MY + +L
Sbjct: 113 REKKLQPDAFTFPSVINSCARILDLELGCIVHEHAMEMGFESDLYIGNALIDMYSRFVDL 172
Query: 279 VKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSAC 338
+ +F+ +++D V WNS+ISGY G E +L ++H+ +G++PD T+ VL AC
Sbjct: 173 DNARYVFEEMSNRDSVSWNSLISGYCSNGFWEDALDMYHKFRMTGMVPDCFTMSSVLLAC 232
Query: 339 SYTGKVKEG 347
VKEG
Sbjct: 233 GSLMAVKEG 241
>gi|302790389|ref|XP_002976962.1| hypothetical protein SELMODRAFT_106096 [Selaginella moellendorffii]
gi|300155440|gb|EFJ22072.1| hypothetical protein SELMODRAFT_106096 [Selaginella moellendorffii]
Length = 1108
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 228/636 (35%), Positives = 349/636 (54%), Gaps = 49/636 (7%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMP--EKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKD 67
T +V Y + G I+EA +F +MP +++V+W VMLG + ++ R +A M +
Sbjct: 477 TMLVSMYGKCGSISEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGG 536
Query: 68 VV---------------AQTNMVLGYC-----------------QDGR---VDEGREIFD 92
V+ +Q VL C GR +++ R +F+
Sbjct: 537 VLPDALSFTSVLSSCYCSQEAQVLRMCILESGYRSACLETALISMHGRCRELEQARSVFN 596
Query: 93 EMPKKNVISWTTMISGYVNNNRIDVARKLFE------VMPEKNEVSWTA-MLMGYTQCGR 145
EM +V+SWT M+S N LF V+P+K ++ T + T G
Sbjct: 597 EMDHGDVVSWTAMVSATAENRDFKEVHNLFRRMQLEGVIPDKFTLATTLDTCLASTTLGL 656
Query: 146 IQDAWELFKAMPMKSVVASNSMILGLGQN-GEVQKARVVFDQMREKDDATWSGMIKVYER 204
+ + +++ +A + +L + N G+ ++A F+ M+ +D +W+ M Y +
Sbjct: 657 GKVIHACVTEIGLEADIAVENALLNMYSNCGDWREALSFFETMKARDLVSWNIMSAAYAQ 716
Query: 205 KGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYV 264
G E + LF MQ EGV+ + + + L+V A + G+ HA D DV V
Sbjct: 717 AGLAKEAVLLFRQMQLEGVKPDKLTFSTTLNVSGGSALVSDGKLFHALAAESGLDSDVSV 776
Query: 265 ASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGV 324
A+ L+ +Y KCG+L + +F +V+ N+II AQ+G E+++K+F +M GV
Sbjct: 777 ATGLVKLYAKCGKLDEAMSLFRGACDWTVVLLNAIIGALAQHGFSEEAVKMFWKMQQEGV 836
Query: 325 MPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAM 384
PD TLV ++SAC + G V+EG F +MK + + P EHYAC VDLLGRAGQ+E A
Sbjct: 837 RPDVATLVSIISACGHAGMVEEGCSSFLTMKEYFGISPTLEHYACFVDLLGRAGQLEHAE 896
Query: 385 KLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQG 444
++I MPFE + ++W SLLG C+ +L E A+++L+L+P N+ +++LSNIY + G
Sbjct: 897 QIIRKMPFEDNTLVWTSLLGTCKLQGDAELGERCAQRILELDPHNSAAHVVLSNIYCATG 956
Query: 445 RFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLL 504
++ D RK M NV PG SW E+ K+VH F D SHP+ I +L+K+ L+
Sbjct: 957 KWKDADVDRKKMLDENVKNAPGMSWFEIGKQVHEFVAGD-RSHPKTDEIYVVLDKLELLM 1015
Query: 505 REAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCH 564
R AGY D DV++E K +L YHSE++A+A+GL+ P ++++KNLRVCGDCH
Sbjct: 1016 RRAGYEADKGL---DVEDELKEKALGYHSERIAIAFGLIATPPETTLKIVKNLRVCGDCH 1072
Query: 565 SAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
+A K IS VMGREII+RD+ RFHHF +G CSC+D W
Sbjct: 1073 TATKYISMVMGREIIVRDSLRFHHFSNGTCSCKDCW 1108
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 118/471 (25%), Positives = 216/471 (45%), Gaps = 29/471 (6%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM-----PEKNVVSWTVMLGGFIRDSRIDD 55
M ERNVVSWTA++ + G A LF M N + ML +
Sbjct: 86 MEERNVVSWTALISANAQCGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRDLAI 145
Query: 56 ARRLFDMMPEKDV--VAQTNMVLG------YCQDGRVDEGREIFDEMPKKNVISWTTMIS 107
R + M+ E + + T ++G Y + G +++ +F +P+K+V+SWT M
Sbjct: 146 GRSIHAMIWELGLERASTTATLVGNAMINMYAKCGSLEDAIAVFLAIPEKDVVSWTAMAG 205
Query: 108 GYVNNNRI--DVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSV---- 161
Y R D R E++ + + + C ++D L + S+
Sbjct: 206 AYAQERRFYPDALRIFREMLLQPLAPNVITFITALGACTSLRDGTWLHSLLHEASLGFDP 265
Query: 162 VASNSMILGLGQNGEVQKARVVFDQM---REKDDATWSGMIKVYERKGYELEVIDLFTLM 218
+ASN++I G+ G+ + A VF M +E D +W+ MI G + + +F +
Sbjct: 266 LASNALINMYGKCGDWEGAYSVFKAMASRQELDLVSWNAMISASVEAGRHGDAMAIFRRL 325
Query: 219 QKEGVRVNFPSLISVLSVCASLASLDHG--RQVHAQLVRCQFDVDVYVASVLITMYIKCG 276
+ EG+R N +LI++L+ A+ + +D G R H ++ + DV + + +I+MY KCG
Sbjct: 326 RLEGMRPNSVTLITILNALAA-SGVDFGAARGFHGRIWESGYLRDVVIGNAIISMYAKCG 384
Query: 277 ELVKGKLIFDNFASK-DIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVL 335
+F K D++ WN+++ K + FH M +G+ P+ V+ + +L
Sbjct: 385 FFSAAWAVFRRIRWKCDVISWNTMLGASEDRKSFGKVVNTFHHMLLAGIDPNKVSFIAIL 444
Query: 336 SACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPD 395
+ACS + + GR+I + ++ ++ +V + G+ G + +A + + MP
Sbjct: 445 NACSNSEALDFGRKIHSLILTRRRDYVESSVATMLVSMYGKCGSISEAELVFKEMPLPSR 504
Query: 396 AII-WGSLLGACRTHMKLDLAEVAAKKLLQ--LEPKNAGPYILLSNIYASQ 443
+++ W +LGA + + A A ++LQ + P +LS+ Y SQ
Sbjct: 505 SLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVLPDALSFTSVLSSCYCSQ 555
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 91/352 (25%), Positives = 152/352 (43%), Gaps = 57/352 (16%)
Query: 105 MISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVAS 164
+I+ YV ++ A +F M E+N VSWTA++ QCG A+ LF+ M ++S A
Sbjct: 66 LINMYVRCGSLEEAHAIFSKMEERNVVSWTALISANAQCGAFARAFALFRTMLLESSAAP 125
Query: 165 NS------------------------MILGLG--------------------QNGEVQKA 180
NS MI LG + G ++ A
Sbjct: 126 NSYTLVAMLNACANSRDLAIGRSIHAMIWELGLERASTTATLVGNAMINMYAKCGSLEDA 185
Query: 181 RVVFDQMREKDDATWSGMIKVY--ERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCA 238
VF + EKD +W+ M Y ER+ Y + + +F M + + N + I+ L C
Sbjct: 186 IAVFLAIPEKDVVSWTAMAGAYAQERRFYP-DALRIFREMLLQPLAPNVITFITALGACT 244
Query: 239 SLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASK---DIVM 295
SL G +H+ L D ++ LI MY KCG+ +F AS+ D+V
Sbjct: 245 SLRD---GTWLHSLLHEASLGFDPLASNALINMYGKCGDWEGAYSVFKAMASRQELDLVS 301
Query: 296 WNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESM- 354
WN++IS + G ++ +F + G+ P+ VTL+ +L+A + +G F
Sbjct: 302 WNAMISASVEAGRHGDAMAIFRRLRLEGMRPNSVTLITILNALAASGVDFGAARGFHGRI 361
Query: 355 -KSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
+S YL + + ++ + + G A + + ++ D I W ++LGA
Sbjct: 362 WESGYLRDVVIGN--AIISMYAKCGFFSAAWAVFRRIRWKCDVISWNTMLGA 411
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 86/178 (48%), Gaps = 5/178 (2%)
Query: 232 SVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASK 291
++L C L G+ H + + +++ + LI MY++CG L + IF +
Sbjct: 30 ALLQSCVDSNDLAKGKHAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAIFSKMEER 89
Query: 292 DIVMWNSIISGYAQYGLGEKSLKVFHEM-FSSGVMPDDVTLVGVLSACSYTGKVKEGREI 350
++V W ++IS AQ G ++ +F M S P+ TLV +L+AC+ + + GR I
Sbjct: 90 NVVSWTALISANAQCGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRDLAIGRSI 149
Query: 351 FESMKSKYLVEPKTEHY---ACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
+ L T M+++ + G +EDA+ + A+P E D + W ++ GA
Sbjct: 150 HAMIWELGLERASTTATLVGNAMINMYAKCGSLEDAIAVFLAIP-EKDVVSWTAMAGA 206
>gi|115453719|ref|NP_001050460.1| Os03g0441400 [Oryza sativa Japonica Group]
gi|108709057|gb|ABF96852.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113548931|dbj|BAF12374.1| Os03g0441400 [Oryza sativa Japonica Group]
gi|215767379|dbj|BAG99607.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 837
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 221/647 (34%), Positives = 352/647 (54%), Gaps = 52/647 (8%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDM 62
+ N + ++ Y ++++A +F + K+ V WT M+ + + ++A R+F
Sbjct: 194 DHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPENAFRVFSK 253
Query: 63 M------PE--------KDVVAQTNMVLG-------------------------YCQDGR 83
M P K V ++VLG Y + G
Sbjct: 254 MRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLNDTEPHVGGALLDMYAKCGD 313
Query: 84 VDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLF------EVMPEKNEVSWTAML 137
+ + R F+ +P +VI + MIS Y +N+ + A +LF V+P NE S +++L
Sbjct: 314 IKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLP--NEYSLSSVL 371
Query: 138 MGYTQCGRIQDAWEL----FKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDA 193
T ++ ++ K + N+++ + ++ + +F +R+ ++
Sbjct: 372 QACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEV 431
Query: 194 TWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQL 253
+W+ ++ + + G E + +F MQ + + SVL CAS AS+ H Q+H +
Sbjct: 432 SWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSI 491
Query: 254 VRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSL 313
+ F+ D + + LI Y KCG + +F + +DI+ WN+IISGYA +G +L
Sbjct: 492 EKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADAL 551
Query: 314 KVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDL 373
++F M S V +D+T V +LS CS TG V G +F+SM+ + ++P EHY C+V L
Sbjct: 552 ELFDRMNKSNVESNDITFVALLSVCSSTGLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRL 611
Query: 374 LGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPY 433
LGRAG++ DA++ I +P P A++W +LL +C H + L +A+K+L++EP++ Y
Sbjct: 612 LGRAGRLNDALQFIGDIPSAPSAMVWRALLSSCIIHKNVALGRFSAEKILEIEPQDETTY 671
Query: 434 ILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMI 493
+LLSN+YA+ G VA LRK+MR V K PG SW+E++ ++H F+ V HP+ +I
Sbjct: 672 VLLSNMYAAAGSLDQVALLRKSMRNIGVRKVPGLSWVEIKGEIHAFS-VGSVDHPDMRVI 730
Query: 494 MRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRV 553
MLE + GY PD + VLHDVD+E+K L HSE+LA+AYGLV P G PIR+
Sbjct: 731 NAMLEWLNLKTSREGYIPDINVVLHDVDKEQKTRMLWVHSERLALAYGLVMTPPGHPIRI 790
Query: 554 MKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
+KNLR C DCH+A +ISK++ REII+RD NRFHHF+DG CSC DYW
Sbjct: 791 LKNLRSCLDCHTAFTVISKIVKREIIVRDINRFHHFEDGKCSCGDYW 837
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 119/482 (24%), Positives = 219/482 (45%), Gaps = 21/482 (4%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLF----WQMPEKNVVSWTVMLGGFIRDSRIDDA 56
MPERN+VS+ +V+ + + G A LF W+ E N T ML I A
Sbjct: 122 MPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMDAAGLA 181
Query: 57 RRL----FDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+ + + + + + ++ Y V + +F+ + +K+ + WT M+S Y N
Sbjct: 182 GGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSEN 241
Query: 113 NRIDVARKLFEVMP----EKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMI 168
+ + A ++F M + N + T++L C + +K++ + +
Sbjct: 242 DCPENAFRVFSKMRVSGCKPNPFALTSVLKAAV-CLPSVVLGKGIHGCAIKTLNDTEPHV 300
Query: 169 LG-----LGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGV 223
G + G+++ AR+ F+ + D S MI Y + + +LF + + V
Sbjct: 301 GGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSV 360
Query: 224 RVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKL 283
N SL SVL C ++ LD G+Q+H ++ + D++V + L+ Y KC ++
Sbjct: 361 LPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLK 420
Query: 284 IFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGK 343
IF + + V WN+I+ G++Q GLGE++L VF EM ++ + VT VL AC+ T
Sbjct: 421 IFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTAS 480
Query: 344 VKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
++ +I S++ K T ++D + G + DA+K+ + + E D I W +++
Sbjct: 481 IRHAGQIHCSIE-KSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHL-MERDIISWNAII 538
Query: 404 GACRTH-MKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVI 462
H D E+ + N ++ L ++ +S G + L +MR + I
Sbjct: 539 SGYALHGQAADALELFDRMNKSNVESNDITFVALLSVCSSTGLVNHGLSLFDSMRIDHGI 598
Query: 463 KP 464
KP
Sbjct: 599 KP 600
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 131/289 (45%), Gaps = 24/289 (8%)
Query: 78 YCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVM----PEKNEVSW 133
Y + G + R +FD MP++N++S+ T++ + + A LF + E N+
Sbjct: 106 YGKLGPLASARRLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVL 165
Query: 134 TAMLM------------GYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKAR 181
T ML G C AW+L + + +I V A
Sbjct: 166 TTMLKLAIAMDAAGLAGGVHSC-----AWKLGHD---HNAFVGSGLIDAYSLCSLVSDAE 217
Query: 182 VVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLA 241
VF+ + KD W+ M+ Y +F+ M+ G + N +L SVL L
Sbjct: 218 HVFNGIVRKDAVVWTAMVSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLP 277
Query: 242 SLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIIS 301
S+ G+ +H ++ D + +V L+ MY KCG++ +L F+ D+++ + +IS
Sbjct: 278 SVVLGKGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMIS 337
Query: 302 GYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREI 350
YAQ E++ ++F + S V+P++ +L VL AC+ ++ G++I
Sbjct: 338 RYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQI 386
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 113/231 (48%), Gaps = 3/231 (1%)
Query: 164 SNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGV 223
+N ++ G+ G + AR +FD+M E++ ++ +++ + ++G LF ++ EG
Sbjct: 99 ANVLLNMYGKLGPLASARRLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGH 158
Query: 224 RVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKL 283
VN L ++L + ++ + VH+ + D + +V S LI Y C + +
Sbjct: 159 EVNQFVLTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEH 218
Query: 284 IFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGK 343
+F+ KD V+W +++S Y++ E + +VF +M SG P+ L VL A
Sbjct: 219 VFNGIVRKDAVVWTAMVSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPS 278
Query: 344 VKEGREIFE-SMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFE 393
V G+ I ++K+ EP ++D+ + G ++DA E +P++
Sbjct: 279 VVLGKGIHGCAIKTLNDTEPHVG--GALLDMYAKCGDIKDARLAFEMIPYD 327
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Query: 234 LSVCASLASLDHGRQVHAQLVR--CQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASK 291
L C + GR VH +VR +D++ A+VL+ MY K G L + +FD +
Sbjct: 66 LQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASARRLFDRMPER 125
Query: 292 DIVMWNSIISGYAQYGLGEKSLKVFHEM 319
++V + +++ +AQ G E + +F +
Sbjct: 126 NMVSFVTLVQAHAQRGDFEAAAALFRRL 153
>gi|449516914|ref|XP_004165491.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At5g52630-like [Cucumis
sativus]
Length = 598
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 208/523 (39%), Positives = 317/523 (60%), Gaps = 16/523 (3%)
Query: 89 EIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVM------PEKNEVSWTAMLMGYTQ 142
++FDE PKK+ +W+++IS + N +A + F M P+ + G+
Sbjct: 81 QVFDETPKKSSTTWSSVISAFAQNEAPLLALQFFRRMLNDGVRPDDHIYPSATKACGFL- 139
Query: 143 CGRIQDAWELFKAMPMKS-----VVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSG 197
R D + + +K+ V +S++ + GE+ AR +FD+M E++ +WSG
Sbjct: 140 --RRSDVGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDARHLFDEMPERNVVSWSG 197
Query: 198 MIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQ 257
MI Y + +E + LF E V VN + SV+ VC+S L+ G+ +H ++
Sbjct: 198 MIYGYAQLDDGVEALTLFKQALIEDVDVNDFTFSSVIRVCSSSTFLELGKLIHGLCLKMS 257
Query: 258 FDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFH 317
FD +V S LI++Y KCG + +FD ++++ +WNS++ AQ+ ++ +F
Sbjct: 258 FDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSMLIACAQHAHTQRVFGLFE 317
Query: 318 EMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRA 377
EM + G+ P+ + + VL ACS+ G V++GRE F M+ Y +EP+TEHYA +VDLLGRA
Sbjct: 318 EMGNVGMKPNFIXFLSVLYACSHAGLVEKGREYFSLMRD-YGIEPETEHYASLVDLLGRA 376
Query: 378 GQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLS 437
G++++A+ +I+ MP P +WG+LL CR H ++A A ++L+++ ++G ++LLS
Sbjct: 377 GKLQEAVSVIKQMPMRPTESVWGALLTGCRIHKDTEMAAFVADRILEMDSSSSGLHVLLS 436
Query: 438 NIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRML 497
N YA+ GR+ + A +RK +R R V K G SW+E KVH FT D SH + I L
Sbjct: 437 NAYAAAGRYEEAARMRKMLRDRGVKKETGLSWVEEGNKVHTFTAGD-RSHAKWVEIYEKL 495
Query: 498 EKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNL 557
E++ + +AGY D+SFVL VD EEK ++RYHSE+LA+A+GL+ P G PIRVMKNL
Sbjct: 496 EELEEEMEKAGYVADTSFVLRAVDGEEKNETIRYHSERLAIAFGLITFPPGRPIRVMKNL 555
Query: 558 RVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
RVCGDCH+AIK +SK GR +I+RD NRFH F+DG CSC DYW
Sbjct: 556 RVCGDCHAAIKFMSKCCGRVLIVRDNNRFHRFEDGKCSCGDYW 598
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/319 (20%), Positives = 146/319 (45%), Gaps = 19/319 (5%)
Query: 2 PERNVVSWTAMVRGYVEEGMITEAGTLFWQM------PEKNVVSWTVMLGGFIRDSRIDD 55
P+++ +W++++ + + A F +M P+ ++ GF+R S +
Sbjct: 87 PKKSSTTWSSVISAFAQNEAPLLALQFFRRMLNDGVRPDDHIYPSATKACGFLRRSDVGK 146
Query: 56 ARRLFDMMPEK--DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNN 113
+ + DV +++V Y + G + + R +FDEMP++NV+SW+ MI GY +
Sbjct: 147 SVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDARHLFDEMPERNVVSWSGMIYGYAQLD 206
Query: 114 RIDVARKLF-EVMPEK---NEVSWTAML-----MGYTQCGRIQDAWELFKAMPMKSVVAS 164
A LF + + E N+ ++++++ + + G++ L + S V S
Sbjct: 207 DGVEALTLFKQALIEDVDVNDFTFSSVIRVCSSSTFLELGKLIHGLCLKMSFDSSSFVGS 266
Query: 165 NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVR 224
++I + G ++ A VFD++ ++ W+ M+ + + V LF M G++
Sbjct: 267 -ALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSMLIACAQHAHTQRVFGLFEEMGNVGMK 325
Query: 225 VNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLI 284
NF +SVL C+ ++ GR+ + + + + + L+ + + G+L + +
Sbjct: 326 PNFIXFLSVLYACSHAGLVEKGREYFSLMRDYGIEPETEHYASLVDLLGRAGKLQEAVSV 385
Query: 285 FDNFASKDI-VMWNSIISG 302
+ +W ++++G
Sbjct: 386 IKQMPMRPTESVWGALLTG 404
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 84/192 (43%), Gaps = 14/192 (7%)
Query: 218 MQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGE 277
+ + N+ + ++L SL G Q+HA +++ V+ LI +Y K
Sbjct: 16 LNQNSFEQNYRQICNLLLSFTRSRSLRQGLQLHAHILKFGLQTIPLVSHNLINLYSKTQL 75
Query: 278 LVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSA 337
+ +FD K W+S+IS +AQ +L+ F M + GV PDD A
Sbjct: 76 PLFSLQVFDETPKKSSTTWSSVISAFAQNEAPLLALQFFRRMLNDGVRPDDHIYPSATKA 135
Query: 338 CSYTGKVKEGREIFESMKSKYLVEPKTEHY------ACMVDLLGRAGQVEDAMKLIEAMP 391
C + + G KS + + KT +Y + +VD+ + G++ DA L + MP
Sbjct: 136 CGFLRRSDVG-------KSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDARHLFDEMP 188
Query: 392 FEPDAIIWGSLL 403
E + + W ++
Sbjct: 189 -ERNVVSWSGMI 199
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 95/216 (43%), Gaps = 17/216 (7%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIR---DSRIDDAR 57
MPERNVVSW+ M+ GY + EA TLF Q ++V IR S +
Sbjct: 187 MPERNVVSWSGMIYGYAQLDDGVEALTLFKQALIEDVDVNDFTFSSVIRVCSSSTFLELG 246
Query: 58 RL-----FDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+L M + + ++ Y + G ++ ++FDE+P +N+ W +M+ +
Sbjct: 247 KLIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSMLIACAQH 306
Query: 113 NRIDVARKLFEVMP----EKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASN--- 165
LFE M + N + + ++L + G ++ E F M +
Sbjct: 307 AHTQRVFGLFEEMGNVGMKPNFIXFLSVLYACSHAGLVEKGREYFSLMRDYGIEPETEHY 366
Query: 166 -SMILGLGQNGEVQKARVVFDQMREK-DDATWSGMI 199
S++ LG+ G++Q+A V QM + ++ W ++
Sbjct: 367 ASLVDLLGRAGKLQEAVSVIKQMPMRPTESVWGALL 402
>gi|125532805|gb|EAY79370.1| hypothetical protein OsI_34497 [Oryza sativa Indica Group]
Length = 681
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 204/551 (37%), Positives = 326/551 (59%), Gaps = 10/551 (1%)
Query: 58 RLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNR--- 114
R FD + DV ++++ Y + G + + ++FD MP+++ ++W+TM++G+V+ +
Sbjct: 133 RAFDAGYKDDVFVCSSLLHLYARWGAMGDAVKVFDRMPRRDRVTWSTMVAGFVSAGQPLD 192
Query: 115 -IDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDA----WELFKAMPMKSVVASNSMIL 169
I + R++ E + +EV ++ T ++ L + VV + S++
Sbjct: 193 AIQMYRRMREDGVKGDEVVMIGVIQACTAARNVRMGASVHGHLLRHGMRMDVVTATSLVD 252
Query: 170 GLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPS 229
+NG + A VF M ++D +WS MI + + G E + LF MQ G++ + +
Sbjct: 253 MYAKNGLLDVACRVFGLMVHRNDVSWSAMISGFAQNGQSDEALRLFRNMQASGIQPDSGA 312
Query: 230 LISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFA 289
L+S L C+++ L GR VH +VR +FD + + + I MY KCG L +++F+ +
Sbjct: 313 LVSALLACSNIGFLKLGRSVHGFIVR-RFDFNCILGTAAIDMYSKCGSLASAQMLFNMIS 371
Query: 290 SKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGRE 349
+D+++WN++I+ +G G+ +L +F EM +G+ PD T +LSA S++G V+EG+
Sbjct: 372 DRDLILWNAMIACCGAHGRGQDALTLFQEMNETGMRPDHATFASLLSALSHSGLVEEGKL 431
Query: 350 IFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTH 409
F M + + + P +HY C+VDLL R+G VE+A L+ +M EP IW +LL C +
Sbjct: 432 WFGCMVNHFKITPAEKHYVCLVDLLARSGLVEEASDLLTSMKAEPTVAIWVALLSGCLNN 491
Query: 410 MKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSW 469
KL+L E A +L+L+P + G L+SN+YA+ ++ V ++RK M+ K PGCS
Sbjct: 492 KKLELGESIADNILELQPDDVGVLALVSNLYAATKKWDKVRQVRKLMKDSGSKKMPGCSS 551
Query: 470 IEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSL 529
IE+ H F D SHP+ I+ + K+ +R+ GY P + FV HD++EE K L
Sbjct: 552 IEIRGTRHAFLMED-QSHPQREEIVSKVAKLDLEMRKMGYIPRTEFVYHDLEEEVKEQQL 610
Query: 530 RYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHF 589
YHSEKLA+A+GL+ G + ++KNLRVCGDCH AIK ISK+ REI++RDA RFHHF
Sbjct: 611 SYHSEKLAIAFGLLNTGPGTRLVIIKNLRVCGDCHDAIKYISKIADREIVVRDAKRFHHF 670
Query: 590 KDGLCSCRDYW 600
KDG+CSCRDYW
Sbjct: 671 KDGVCSCRDYW 681
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 90/386 (23%), Positives = 180/386 (46%), Gaps = 39/386 (10%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFI------RDSRID 54
MP R+ V+W+ MV G+V G +A ++ +M E V V++ G I R+ R+
Sbjct: 169 MPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMREDGVKGDEVVMIGVIQACTAARNVRMG 228
Query: 55 DA--RRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+ L DVV T++V Y ++G +D +F M +N +SW+ MISG+ N
Sbjct: 229 ASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDVACRVFGLMVHRNDVSWSAMISGFAQN 288
Query: 113 NRIDVARKLFEVM------PEKNEVSWTAML----MGYTQCGRIQDAWELFKAMPMKSVV 162
+ D A +LF M P+ + +A+L +G+ + GR + + + ++
Sbjct: 289 GQSDEALRLFRNMQASGIQPDSGALV-SALLACSNIGFLKLGRSVHGF-IVRRFDFNCIL 346
Query: 163 ASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEG 222
+ ++ + + G + A+++F+ + ++D W+ MI G + + LF M + G
Sbjct: 347 GTAAIDM-YSKCGSLASAQMLFNMISDRDLILWNAMIACCGAHGRGQDALTLFQEMNETG 405
Query: 223 VRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDV----YVASVLITMYIKCGEL 278
+R + + S+LS + ++ G+ +V F + YV L+ + + G +
Sbjct: 406 MRPDHATFASLLSALSHSGLVEEGKLWFGCMVN-HFKITPAEKHYV--CLVDLLARSGLV 462
Query: 279 VKGKLIFDNF-ASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSS--GVMPDDVTLVGVL 335
+ + + A + +W +++SG L K L++ + + + PDDV ++ ++
Sbjct: 463 EEASDLLTSMKAEPTVAIWVALLSGC----LNNKKLELGESIADNILELQPDDVGVLALV 518
Query: 336 S----ACSYTGKVKEGREIFESMKSK 357
S A KV++ R++ + SK
Sbjct: 519 SNLYAATKKWDKVRQVRKLMKDSGSK 544
>gi|414865780|tpg|DAA44337.1| TPA: hypothetical protein ZEAMMB73_255594 [Zea mays]
Length = 665
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 202/512 (39%), Positives = 302/512 (58%), Gaps = 10/512 (1%)
Query: 97 KNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFK-- 154
+NV + IS Y R + A ++F+ MP ++ VSW AM+ G+ + G A E+FK
Sbjct: 156 RNVYVAHSAISMYSRCGRPEDAYRVFDGMPHRDVVSWNAMIAGFARVGLFDRAIEVFKQF 215
Query: 155 -----AMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYEL 209
+MP +A +G + +++ R VFD M+ K+ +W+ M+ VY + +
Sbjct: 216 VVLQGSMPDAGTMAGILPAMGNAKPDDIRFVRRVFDNMQFKELISWNAMLAVYANNEFHV 275
Query: 210 EVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLI 269
+ ++LF LM+K+ V + +L +VL C L++ G+++H + R ++ + + L+
Sbjct: 276 KAVELFMLMEKDEVEPDSITLATVLPPCGELSAFSVGKRIHEIIKRKNMCPNLLLENALM 335
Query: 270 TMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDV 329
MY CG L + IFD +++D++ W SIIS Y ++G G +++ +F +M G+ PD +
Sbjct: 336 DMYASCGCLKDAREIFDLMSARDVISWTSIISAYGKHGHGREAVDLFEKMLGQGLEPDSI 395
Query: 330 TLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEA 389
V VL+ACS+ G + +G+ F+SM S+Y + PK EHY CMVDLLGRAG + +A I
Sbjct: 396 AFVAVLAACSHAGLLADGKHYFDSMTSRYHIIPKAEHYTCMVDLLGRAGCINEAYDFITT 455
Query: 390 MPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDV 449
M EP+ +WG+LL ACR H +D+ VAA L L P+ G Y+LLSN+YA GR+ DV
Sbjct: 456 MLIEPNERVWGALLQACRIHSNMDIGLVAADNLFSLVPEQTGYYVLLSNMYARAGRWADV 515
Query: 450 AELRKNMRKRNVIKPPGCSWIEVEKKVHMF-TGRDCVSHPEHPMIMRMLEKIGGLLREAG 508
+R M + + K PG S +E+ +VH F G C HP+ MI L+++ G +R G
Sbjct: 516 TSVRSVMVNKGIKKFPGTSIVELGDQVHTFHIGDRC--HPQSEMIYHKLDELLGKIRGMG 573
Query: 509 YCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIK 568
Y P+ LHDV+EE+K L HSEKLA+A+ L+ G IRV NLR C DCH A K
Sbjct: 574 YNPEVEATLHDVEEEDKEDHLSVHSEKLAIAFLLLNTSPGTIIRVTMNLRTCSDCHLAAK 633
Query: 569 LISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
LIS + REI+L+D NR HH G+CSC DYW
Sbjct: 634 LISIITCREIVLKDTNRIHHIVQGVCSCGDYW 665
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 124/262 (47%), Gaps = 17/262 (6%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDM 62
+RNV + + Y G +A +F MP ++VVSW M+ GF R D A +F
Sbjct: 155 DRNVYVAHSAISMYSRCGRPEDAYRVFDGMPHRDVVSWNAMIAGFARVGLFDRAIEVFKQ 214
Query: 63 -------MPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRI 115
MP+ +A +G + + R +FD M K +ISW M++ Y NN
Sbjct: 215 FVVLQGSMPDAGTMAGILPAMGNAKPDDIRFVRRVFDNMQFKELISWNAMLAVYANNEFH 274
Query: 116 DVARKLFEVMPEKNEVSWTAMLMGYT--QCGRI------QDAWELFKAMPM-KSVVASNS 166
A +LF +M EK+EV ++ + CG + + E+ K M +++ N+
Sbjct: 275 VKAVELFMLM-EKDEVEPDSITLATVLPPCGELSAFSVGKRIHEIIKRKNMCPNLLLENA 333
Query: 167 MILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVN 226
++ G ++ AR +FD M +D +W+ +I Y + G+ E +DLF M +G+ +
Sbjct: 334 LMDMYASCGCLKDAREIFDLMSARDVISWTSIISAYGKHGHGREAVDLFEKMLGQGLEPD 393
Query: 227 FPSLISVLSVCASLASLDHGRQ 248
+ ++VL+ C+ L G+
Sbjct: 394 SIAFVAVLAACSHAGLLADGKH 415
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/346 (25%), Positives = 152/346 (43%), Gaps = 53/346 (15%)
Query: 145 RIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYER 204
++ A+ A+P+ V +S +G + V F+ + I+
Sbjct: 55 KLIQAYAACSALPLAHTVLESS-----SPDGRSRTTTVCFNVL-----------IRALTA 98
Query: 205 KGYELEVIDLFTLMQKEGVRVNFPSLIS---VLSVCASLASLDHGRQVHAQLVRCQFDVD 261
+ + LF M+ G FP + L C++ L G Q+H+ + + + D +
Sbjct: 99 SSLHRDALVLFASMRPRGPAC-FPDHYTYPLALKSCSASKDLLLGLQIHSAVAKLRLDRN 157
Query: 262 VYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFS 321
VYVA I+MY +CG +FD +D+V WN++I+G+A+ GL +++++VF +
Sbjct: 158 VYVAHSAISMYSRCGRPEDAYRVFDGMPHRDVVSWNAMIAGFARVGLFDRAIEVFKQFVV 217
Query: 322 -SGVMPDDVTLVGVLSAC--SYTGKVKEGREIFESMKSKYLVE--------PKTEHYACM 370
G MPD T+ G+L A + ++ R +F++M+ K L+ E +
Sbjct: 218 LQGSMPDAGTMAGILPAMGNAKPDDIRFVRRVFDNMQFKELISWNAMLAVYANNEFHVKA 277
Query: 371 VDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNA 430
V+L L+E EPD+I ++L C +L V + ++ KN
Sbjct: 278 VELF----------MLMEKDEVEPDSITLATVLPPCG---ELSAFSVGKRIHEIIKRKNM 324
Query: 431 GPYILLSN----IYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEV 472
P +LL N +YAS G D E+ M R+VI SW +
Sbjct: 325 CPNLLLENALMDMYASCGCLKDAREIFDLMSARDVI-----SWTSI 365
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 136/329 (41%), Gaps = 36/329 (10%)
Query: 105 MISGYVNNNRIDVARKLFEVMP-----EKNEVSWTAMLMGYTQCGRIQDAWELFKAM--- 156
+I Y + + +A + E V + ++ T +DA LF +M
Sbjct: 56 LIQAYAACSALPLAHTVLESSSPDGRSRTTTVCFNVLIRALTASSLHRDALVLFASMRPR 115
Query: 157 -------------PMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYE 203
+KS AS ++LGL + V K R+ +++ I +Y
Sbjct: 116 GPACFPDHYTYPLALKSCSASKDLLLGLQIHSAVAKLRL------DRNVYVAHSAISMYS 169
Query: 204 RKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVD-- 261
R G + +F M V V++ ++I+ A + D +V Q V Q +
Sbjct: 170 RCGRPEDAYRVFDGMPHRDV-VSWNAMIAGF---ARVGLFDRAIEVFKQFVVLQGSMPDA 225
Query: 262 VYVASVLITM-YIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMF 320
+A +L M K ++ + +FDN K+++ WN++++ YA K++++F M
Sbjct: 226 GTMAGILPAMGNAKPDDIRFVRRVFDNMQFKELISWNAMLAVYANNEFHVKAVELFMLME 285
Query: 321 SSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQV 380
V PD +TL VL C G+ I E +K K + P ++D+ G +
Sbjct: 286 KDEVEPDSITLATVLPPCGELSAFSVGKRIHEIIKRKNMC-PNLLLENALMDMYASCGCL 344
Query: 381 EDAMKLIEAMPFEPDAIIWGSLLGACRTH 409
+DA ++ + M D I W S++ A H
Sbjct: 345 KDAREIFDLMSAR-DVISWTSIISAYGKH 372
>gi|449469094|ref|XP_004152256.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like [Cucumis sativus]
Length = 611
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 214/599 (35%), Positives = 343/599 (57%), Gaps = 49/599 (8%)
Query: 16 YVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMM----------PE 65
Y + G+I +A LF +MP ++ VSW +L ++ RR M+ P+
Sbjct: 48 YGKCGLIPQALQLFDEMPNRDHVSWASILTA---HNKALIPRRTLSMLNTMFTHDGLQPD 104
Query: 66 KDVVA---QTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLF 122
V A + LGY + G+ R + V+ +++I Y + D AR +F
Sbjct: 105 HFVFACIVRACSSLGYLRLGKQVHARFMLSFFCDDEVVK-SSLIDMYTKCGQPDDARAVF 163
Query: 123 EVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARV 182
+ + KN VSWT+M+ GY + GR +A +LF P++++ + ++I GL Q+
Sbjct: 164 DSILFKNSVSWTSMISGYARSGRKCEAMDLFLQAPVRNLFSWTALISGLIQS-------- 215
Query: 183 VFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLI-SVLSVCASLA 241
G+ + LF M++EG+ + P ++ SV+ CA+LA
Sbjct: 216 -----------------------GHGIYSFSLFNEMRREGIDIVDPLVLSSVVGGCANLA 252
Query: 242 SLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIIS 301
L+ G+Q+H ++ F+ +++++ L+ MY KC +++ K IF KD++ W SII
Sbjct: 253 LLELGKQIHGLVIALGFESCLFISNALVDMYAKCSDILAAKDIFYRMPRKDVISWTSIIV 312
Query: 302 GYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVE 361
G AQ+G E++L ++ EM S + P++VT VG+L ACS+ G V GRE+F SM + Y +
Sbjct: 313 GTAQHGKAEEALTLYDEMVLSRIKPNEVTFVGLLYACSHAGLVSRGRELFRSMTTDYSIN 372
Query: 362 PKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKK 421
P +HY C++DLL R+G +++A L++ +PF+PD W SLL AC H L++ A +
Sbjct: 373 PSLQHYTCLLDLLSRSGHLDEAENLLDKIPFKPDEPTWASLLSACMRHNNLEMGVRIADR 432
Query: 422 LLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTG 481
+L L+P++ YILLSN+YA + V+++RK M V K PG S I+ K +F
Sbjct: 433 VLDLKPEDPSTYILLSNVYAGAEMWGSVSKVRKLMSSMEVRKEPGYSSIDFGKDSQVFHA 492
Query: 482 RDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYG 541
+ HP I +L+ + +R+ GY P++SFVL+D++++EK L +HSE+LAVAYG
Sbjct: 493 GESCDHPMKNEICNLLKDLDAEMRKRGYVPNTSFVLYDIEQQEKEKQLFWHSERLAVAYG 552
Query: 542 LVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
L+K G IR++KNLR+CGDCH+ +K IS ++ REI++RDA R+HHFK+G CSC D+W
Sbjct: 553 LLKAVPGTIIRIVKNLRICGDCHNVLKFISDIVKREIMVRDATRYHHFKEGKCSCNDFW 611
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 93/413 (22%), Positives = 176/413 (42%), Gaps = 59/413 (14%)
Query: 1 MPERNVVSW----TAMVRGYVEEGMITEAGTLFWQ---MPEKNVVSWTVMLG---GFIRD 50
MP R+ VSW TA + + ++ T+F P+ V + V G++R
Sbjct: 64 MPNRDHVSWASILTAHNKALIPRRTLSMLNTMFTHDGLQPDHFVFACIVRACSSLGYLRL 123
Query: 51 SRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYV 110
+ AR + + +VV +++++ Y + G+ D+ R +FD + KN +SWT+MISGY
Sbjct: 124 GKQVHARFMLSFFCDDEVV-KSSLIDMYTKCGQPDDARAVFDSILFKNSVSWTSMISGYA 182
Query: 111 NNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMP-----------MK 159
+ R A LF P +N SWTA++ G Q G ++ LF M +
Sbjct: 183 RSGRKCEAMDLFLQAPVRNLFSWTALISGLIQSGHGIYSFSLFNEMRREGIDIVDPLVLS 242
Query: 160 SVVA--SNSMILGLGQN---------------------------GEVQKARVVFDQMREK 190
SVV +N +L LG+ ++ A+ +F +M K
Sbjct: 243 SVVGGCANLALLELGKQIHGLVIALGFESCLFISNALVDMYAKCSDILAAKDIFYRMPRK 302
Query: 191 DDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVH 250
D +W+ +I + G E + L+ M ++ N + + +L C+ + GR++
Sbjct: 303 DVISWTSIIVGTAQHGKAEEALTLYDEMVLSRIKPNEVTFVGLLYACSHAGLVSRGRELF 362
Query: 251 AQLVR-CQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASK-DIVMWNSIISGYAQYGL 308
+ + + + L+ + + G L + + + D K D W S++S ++
Sbjct: 363 RSMTTDYSINPSLQHYTCLLDLLSRSGHLDEAENLLDKIPFKPDEPTWASLLSACMRHNN 422
Query: 309 GEKSLKVFHEMFSSGVMPDD----VTLVGVLSACSYTGKVKEGREIFESMKSK 357
E +++ + + P+D + L V + G V + R++ SM+ +
Sbjct: 423 LEMGVRIADRVLD--LKPEDPSTYILLSNVYAGAEMWGSVSKVRKLMSSMEVR 473
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 135/313 (43%), Gaps = 42/313 (13%)
Query: 143 CGRIQDAW-------ELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATW 195
C R Q A ++ KA KS + SN+++ G+ G + +A +FD+M +D +W
Sbjct: 13 CARRQSASAAGELHSQIIKAGFDKSSLLSNTLLDVYGKCGLIPQALQLFDEMPNRDHVSW 72
Query: 196 SGMIKVYERKGYELEVIDLF-TLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLV 254
+ ++ + + + + T+ +G++ + ++ C+SL L G+QVHA+ +
Sbjct: 73 ASILTAHNKALIPRRTLSMLNTMFTHDGLQPDHFVFACIVRACSSLGYLRLGKQVHARFM 132
Query: 255 RCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYA---------- 304
F D V S LI MY KCG+ + +FD+ K+ V W S+ISGYA
Sbjct: 133 LSFFCDDEVVKSSLIDMYTKCGQPDDARAVFDSILFKNSVSWTSMISGYARSGRKCEAMD 192
Query: 305 ---------------------QYGLGEKSLKVFHEMFSSGV-MPDDVTLVGVLSACSYTG 342
Q G G S +F+EM G+ + D + L V+ C+
Sbjct: 193 LFLQAPVRNLFSWTALISGLIQSGHGIYSFSLFNEMRREGIDIVDPLVLSSVVGGCANLA 252
Query: 343 KVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSL 402
++ G++I + E +VD+ + + A + MP D I W S+
Sbjct: 253 LLELGKQI-HGLVIALGFESCLFISNALVDMYAKCSDILAAKDIFYRMP-RKDVISWTSI 310
Query: 403 LGACRTHMKLDLA 415
+ H K + A
Sbjct: 311 IVGTAQHGKAEEA 323
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 128/267 (47%), Gaps = 20/267 (7%)
Query: 225 VNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLI 284
+N + L +CA S ++H+Q+++ FD +++ L+ +Y KCG + + +
Sbjct: 1 MNISHFLHQLQLCARRQSASAAGELHSQIIKAGFDKSSLLSNTLLDVYGKCGLIPQALQL 60
Query: 285 FDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFS-SGVMPDDVTLVGVLSACSYTGK 343
FD ++D V W SI++ + + + ++L + + MF+ G+ PD ++ ACS G
Sbjct: 61 FDEMPNRDHVSWASILTAHNKALIPRRTLSMLNTMFTHDGLQPDHFVFACIVRACSSLGY 120
Query: 344 VKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
++ G+++ + + + + ++D+ + GQ +DA + +++ F+ +++ W S++
Sbjct: 121 LRLGKQVHARFMLSFFCDDEVVK-SSLIDMYTKCGQPDDARAVFDSILFK-NSVSWTSMI 178
Query: 404 -GACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKR--N 460
G R+ K + A LQ +N + L + G L MR+ +
Sbjct: 179 SGYARSGRKCE----AMDLFLQAPVRNLFSWTALISGLIQSGHGIYSFSLFNEMRREGID 234
Query: 461 VIKP-------PGC---SWIEVEKKVH 477
++ P GC + +E+ K++H
Sbjct: 235 IVDPLVLSSVVGGCANLALLELGKQIH 261
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 91/209 (43%), Gaps = 24/209 (11%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMP----E 65
A+V Y + I A +F++MP K+V+SWT ++ G + + ++A L+D M +
Sbjct: 277 NALVDMYAKCSDILAAKDIFYRMPRKDVISWTSIIVGTAQHGKAEEALTLYDEMVLSRIK 336
Query: 66 KDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVIS-----WTTMISGYVNNNRIDVARK 120
+ V ++ G V GRE+F M I+ +T ++ + +D A
Sbjct: 337 PNEVTFVGLLYACSHAGLVSRGRELFRSMTTDYSINPSLQHYTCLLDLLSRSGHLDEAEN 396
Query: 121 LFEVMPEK-NEVSWTAML----------MGYTQCGRIQDAWELFKAMPMKSVVASNSMIL 169
L + +P K +E +W ++L MG R+ D L P ++ SN +
Sbjct: 397 LLDKIPFKPDEPTWASLLSACMRHNNLEMGVRIADRVLD---LKPEDPSTYILLSN-VYA 452
Query: 170 GLGQNGEVQKARVVFDQMREKDDATWSGM 198
G G V K R + M + + +S +
Sbjct: 453 GAEMWGSVSKVRKLMSSMEVRKEPGYSSI 481
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/186 (20%), Positives = 85/186 (45%), Gaps = 16/186 (8%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMP----EKNVVSWTVMLGGFIRDSRIDDA 56
MP ++V+SWT+++ G + G EA TL+ +M + N V++ +L +
Sbjct: 299 MPRKDVISWTSIIVGTAQHGKAEEALTLYDEMVLSRIKPNEVTFVGLLYACSHAGLVSRG 358
Query: 57 RRLFDMMP-----EKDVVAQTNMVLGYCQDGRVDEGREIFDEMP-KKNVISWTTMISGYV 110
R LF M + T ++ + G +DE + D++P K + +W +++S +
Sbjct: 359 RELFRSMTTDYSINPSLQHYTCLLDLLSRSGHLDEAENLLDKIPFKPDEPTWASLLSACM 418
Query: 111 NNNRID----VARKLFEVMPE--KNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVAS 164
+N ++ +A ++ ++ PE + + + G G + +L +M ++
Sbjct: 419 RHNNLEMGVRIADRVLDLKPEDPSTYILLSNVYAGAEMWGSVSKVRKLMSSMEVRKEPGY 478
Query: 165 NSMILG 170
+S+ G
Sbjct: 479 SSIDFG 484
>gi|124360227|gb|ABN08240.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 687
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 211/560 (37%), Positives = 336/560 (60%), Gaps = 13/560 (2%)
Query: 53 IDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMP----KKNVISWTTMISG 108
++ ARR+FD + +DVV+ T++ Y + G +G ++F EM K N ++ ++++
Sbjct: 129 VEGARRVFDDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPA 188
Query: 109 YVNNNRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVAS 164
+ +++ N +A++ Y +C +++A +F MP + VV+
Sbjct: 189 CAELKDLKSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSW 248
Query: 165 NSMILGLGQNGEVQKARVVFDQMRE----KDDATWSGMIKVYERKGYELEVIDLFTLMQK 220
N ++ +N E +K +F +M D+ATW+ +I G E +++F MQK
Sbjct: 249 NGVLTAYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQK 308
Query: 221 EGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVK 280
G + N ++ S+L C+ +L G+++H + R D+ + L+ MY KCG+L
Sbjct: 309 MGFKPNEITISSILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKCGDLNL 368
Query: 281 GKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSY 340
+ +FD KD+V WN++I A +G G+++L +F +M S V P+ VT GVLS CS+
Sbjct: 369 SRNVFDMMRRKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGVLSGCSH 428
Query: 341 TGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWG 400
+ V+EG +IF SM +LVEP HY+C+VD+ RAG++ +A K I+ MP EP A WG
Sbjct: 429 SRLVEEGVQIFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPMEPTASAWG 488
Query: 401 SLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRN 460
+LL ACR + ++LA+++AKKL ++EP N G Y+ L NI + + + +++R M++R
Sbjct: 489 ALLAACRVYKNVELAKISAKKLFEIEPNNPGNYVSLFNILVTAKMWSEASQVRILMKERG 548
Query: 461 VIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDV 520
+ K PGCSW++V KVH F D S+ E I L+++ ++ AGY PD+ +VL D+
Sbjct: 549 ITKTPGCSWLQVGNKVHTFVVGD-KSNIESDKIYNFLDELVEKMKMAGYKPDTDYVLQDI 607
Query: 521 DEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIIL 580
D+EEK SL HSEKLAVA+G++ L IRV KNLR+CGDCH+AIK +SKV+G I++
Sbjct: 608 DQEEKAESLCNHSEKLAVAFGILNLNGQSTIRVFKNLRICGDCHNAIKYMSKVVGVIIVV 667
Query: 581 RDANRFHHFKDGLCSCRDYW 600
RD+ RFHHFK+G CSC+D W
Sbjct: 668 RDSLRFHHFKNGNCSCKDLW 687
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 139/282 (49%), Gaps = 8/282 (2%)
Query: 82 GRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKN-EVSWTAMLMGY 140
G + R++FD +P+ + + +T+IS + + A K++ + E+ + L
Sbjct: 26 GDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPDMPVFLAAA 85
Query: 141 TQCGRIQDAWEL-------FKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDA 193
C DA + + M V N++I G+ V+ AR VFD + +D
Sbjct: 86 KACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFDDLVVRDVV 145
Query: 194 TWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQL 253
+W+ + Y + G+ + +D+F M GV+ N ++ S+L CA L L G+++H
Sbjct: 146 SWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKSGKEIHGFA 205
Query: 254 VRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSL 313
VR V+++V S L+++Y KC + + +++FD +D+V WN +++ Y + EK
Sbjct: 206 VRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYFKNKEYEKGF 265
Query: 314 KVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMK 355
+F +M GV D+ T V+ C G+ +E E+F M+
Sbjct: 266 SLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQ 307
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 74/146 (50%), Gaps = 13/146 (8%)
Query: 36 NVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEM- 94
++ S T +L + + ++ +R +FDMM KDVVA M++ G E +FD+M
Sbjct: 349 DLTSTTALLYMYAKCGDLNLSRNVFDMMRRKDVVAWNTMIIANAMHGNGKEALFLFDKML 408
Query: 95 ---PKKNVISWTTMISGYVNNNRIDVARKLFEVM-------PEKNEVSWTAMLMGYTQCG 144
+ N +++T ++SG ++ ++ ++F M P+ N S + Y++ G
Sbjct: 409 LSRVQPNSVTFTGVLSGCSHSRLVEEGVQIFNSMGRDHLVEPDANHYSCVVDI--YSRAG 466
Query: 145 RIQDAWELFKAMPMKSVVASNSMILG 170
R+ +A++ + MPM+ ++ +L
Sbjct: 467 RLNEAYKFIQGMPMEPTASAWGALLA 492
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 28/135 (20%), Positives = 61/135 (45%), Gaps = 2/135 (1%)
Query: 268 LITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPD 327
LI + + G+ + + +FDN D +++IS +GL +++K++ + G+ PD
Sbjct: 18 LIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPD 77
Query: 328 DVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLI 387
+ AC+ +G +E+ + ++ V ++ G+ VE A ++
Sbjct: 78 MPVFLAAAKACAVSGDALRVKEVHDD-ATRCGVMSDVFVGNALIHAYGKCKCVEGARRVF 136
Query: 388 EAMPFEPDAIIWGSL 402
+ + D + W SL
Sbjct: 137 DDLVVR-DVVSWTSL 150
>gi|297600629|ref|NP_001049519.2| Os03g0241800 [Oryza sativa Japonica Group]
gi|108707104|gb|ABF94899.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|255674356|dbj|BAF11433.2| Os03g0241800 [Oryza sativa Japonica Group]
Length = 810
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 219/576 (38%), Positives = 326/576 (56%), Gaps = 20/576 (3%)
Query: 33 PEKNVVSWTVMLGGFIRDSRIDDARRLF-DMMPEKDVVAQTN----MVLGYC--QDGRVD 85
P++ V + V+L G S DA LF M P+ + + L C DG V
Sbjct: 81 PDRTTVFFNVLLRGLTAASLHRDALLLFASMRPQGHACFPDHYTYPLALKSCAATDGLV- 139
Query: 86 EGREIFDEMPK----KNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYT 141
GR+I + NV + IS Y R D A ++FE M ++ VSW AM+ G+
Sbjct: 140 LGRQIHSSTARLGLDGNVFVAHSAISMYARCGRPDDAYQMFEEMQYRDVVSWNAMISGFA 199
Query: 142 QCGRIQDAWELFKAM-------PMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDAT 194
G A ++F+ + P +AS +G + ++ + VFD+MR K +
Sbjct: 200 HAGLFGRAMDVFRELVALQCPKPDAGTMASILPSMGKARVEDIALLKGVFDEMRFKGLIS 259
Query: 195 WSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLV 254
W+ M+ VY +E ++LF MQK+G+ + +L +VL C +++L G+++H +
Sbjct: 260 WNAMLAVYTNNEMHVEAVELFMRMQKDGIEPDAVTLATVLPSCGEVSALSLGKRIHEVIK 319
Query: 255 RCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLK 314
R + + + + L+ MY CG L + + +FD+ ++D+V W SIIS Y ++G G +++
Sbjct: 320 RRRMCSSMLLENALMDMYANCGCLKEARDVFDSMGTRDVVSWTSIISAYGRHGHGREAID 379
Query: 315 VFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLL 374
+F +M G+ PD + V +L+ACS+ G + G+ F SM S++ + PK EHYACMVDLL
Sbjct: 380 LFEKMCGQGLEPDSIAFVAILAACSHAGLLDMGKHYFYSMTSEFHIAPKLEHYACMVDLL 439
Query: 375 GRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYI 434
GRAG + +A I MP +P+ +WG+LLGACR H +D+ +AA LL+L PK G Y+
Sbjct: 440 GRAGCIREAYDFIMVMPIKPNERVWGALLGACRIHSNMDIGLLAADSLLRLAPKQTGYYV 499
Query: 435 LLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIM 494
LLSNIYA GR+ DV+ +R M + + K PG S E+ +VH F D SHP+ MI
Sbjct: 500 LLSNIYARAGRWADVSMVRSVMESKGIKKLPGVSNAELGDRVHTFHIGD-TSHPQSKMIY 558
Query: 495 RMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVM 554
+ L ++ +RE GY P+ LHDV+EE+K L HSEKLA+A+ L+ G PIR+
Sbjct: 559 KKLSELLRRIREMGYNPEVEATLHDVEEEDKEGHLSVHSEKLAIAFLLINTNPGTPIRIT 618
Query: 555 KNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFK 590
NLR C DCH A KLIS + GREIIL+D NR H+ K
Sbjct: 619 MNLRTCSDCHHAAKLISTIAGREIILKDVNRIHYMK 654
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 121/260 (46%), Gaps = 17/260 (6%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMM- 63
NV + + Y G +A +F +M ++VVSW M+ GF A +F +
Sbjct: 156 NVFVAHSAISMYARCGRPDDAYQMFEEMQYRDVVSWNAMISGFAHAGLFGRAMDVFRELV 215
Query: 64 ------PEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDV 117
P+ +A +G + + + +FDEM K +ISW M++ Y NN
Sbjct: 216 ALQCPKPDAGTMASILPSMGKARVEDIALLKGVFDEMRFKGLISWNAMLAVYTNNEMHVE 275
Query: 118 ARKLFEVMPEKNEVSWTAMLMGYT--QCGRI------QDAWELFKAMPM-KSVVASNSMI 168
A +LF M +K+ + A+ + CG + + E+ K M S++ N+++
Sbjct: 276 AVELFMRM-QKDGIEPDAVTLATVLPSCGEVSALSLGKRIHEVIKRRRMCSSMLLENALM 334
Query: 169 LGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFP 228
G +++AR VFD M +D +W+ +I Y R G+ E IDLF M +G+ +
Sbjct: 335 DMYANCGCLKEARDVFDSMGTRDVVSWTSIISAYGRHGHGREAIDLFEKMCGQGLEPDSI 394
Query: 229 SLISVLSVCASLASLDHGRQ 248
+ +++L+ C+ LD G+
Sbjct: 395 AFVAILAACSHAGLLDMGKH 414
Score = 42.7 bits (99), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 59/138 (42%), Gaps = 10/138 (7%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMP----E 65
A++ Y G + EA +F M ++VVSWT ++ + R +A LF+ M E
Sbjct: 331 NALMDMYANCGCLKEARDVFDSMGTRDVVSWTSIISAYGRHGHGREAIDLFEKMCGQGLE 390
Query: 66 KDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVIS-----WTTMISGYVNNNRIDVARK 120
D +A ++ G +D G+ F M + I+ + M+ I A
Sbjct: 391 PDSIAFVAILAACSHAGLLDMGKHYFYSMTSEFHIAPKLEHYACMVDLLGRAGCIREAYD 450
Query: 121 LFEVMPEK-NEVSWTAML 137
VMP K NE W A+L
Sbjct: 451 FIMVMPIKPNERVWGALL 468
>gi|449461943|ref|XP_004148701.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic-like [Cucumis sativus]
gi|449517215|ref|XP_004165641.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic-like [Cucumis sativus]
Length = 706
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 212/579 (36%), Positives = 342/579 (59%), Gaps = 23/579 (3%)
Query: 39 SWTVMLGGFIRDSRIDDARRLFDMMP----EKDVVAQTNMVLGYCQDGRVDEGREIFDEM 94
++ ++ I I +RL + M E D + ++L + + G + + +FDEM
Sbjct: 134 TYDALINACIGLKSIRGVKRLCNYMVDNGFEPDQYMRNRVLLMHVKCGMMIDACRLFDEM 193
Query: 95 PKKNVISWTTMISGYVNNNRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAW 150
P +N +SW T+ISGYV++ A +LF +M E+ ++ M+ I
Sbjct: 194 PARNAVSWGTIISGYVDSGNYVEAFRLFILMREEFYDCGPRTFATMIRASAGLEIIFPGR 253
Query: 151 EL----FKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKG 206
+L KA + + S ++I + G ++ A VFD+M +K W+ +I Y G
Sbjct: 254 QLHSCAIKAGLGQDIFVSCALIDMYSKCGSLEDAHCVFDEMPDKTIVGWNSIIAGYALHG 313
Query: 207 YELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVAS 266
Y E +DL+ M+ GV+++ + ++ +C+ LAS+ +QVHA LVR F +DV +
Sbjct: 314 YSEEALDLYHEMRDSGVKMDHFTFSIIIRICSRLASVARAKQVHASLVRNGFGLDVVANT 373
Query: 267 VLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMP 326
L+ Y K G++ + +FD + ++I+ WN++I+GY +G GE+++ +F +M G+MP
Sbjct: 374 ALVDFYSKWGKVDDARHVFDRMSCRNIISWNALIAGYGNHGHGEEAIDMFEKMLREGMMP 433
Query: 327 DDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKL 386
+ VT + VLSACS +G + G EIF+SM + V+P+ H+ACM++LLGR G +++A L
Sbjct: 434 NHVTFLAVLSACSISGLFERGWEIFQSMTRDHKVKPRAMHFACMIELLGREGLLDEAYAL 493
Query: 387 IEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRF 446
I PF+P A +W +LL ACR H L+L + AA+KL +EP+ YI+L NIY S G+
Sbjct: 494 IRKAPFQPTANMWAALLRACRVHGNLELGKFAAEKLYGMEPEKLSNYIVLLNIYNSSGKL 553
Query: 447 HDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLL-- 504
+ A++ + ++++ + P CSWIEV + H F D H I +++ K+ L+
Sbjct: 554 KEAADVFQTLKRKGLRMLPACSWIEVNNQPHAFLSGD----KHHVQIEKVVGKVDELMLN 609
Query: 505 -REAGYCP-DSSFVLHDVDE-EEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCG 561
+ GY P + +F+L DVDE EEK+ YHSEKLA+AYGL+ E P++++++ R+C
Sbjct: 610 ISKLGYVPEEQNFMLPDVDENEEKIR--MYHSEKLAIAYGLLNTLEKTPLQIVQSHRICS 667
Query: 562 DCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
DCHS IKLI+ + REI++RDA+RFHHF+DG CSC DYW
Sbjct: 668 DCHSVIKLIAMITKREIVIRDASRFHHFRDGSCSCGDYW 706
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 90/383 (23%), Positives = 180/383 (46%), Gaps = 31/383 (8%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSR----IDDA 56
MP RN VSW ++ GYV+ G EA LF M E+ IR S I
Sbjct: 193 MPARNAVSWGTIISGYVDSGNYVEAFRLFILMREEFYDCGPRTFATMIRASAGLEIIFPG 252
Query: 57 RRLFDMMPE----KDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
R+L + +D+ ++ Y + G +++ +FDEMP K ++ W ++I+GY +
Sbjct: 253 RQLHSCAIKAGLGQDIFVSCALIDMYSKCGSLEDAHCVFDEMPDKTIVGWNSIIAGYALH 312
Query: 113 NRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKS----VVAS 164
+ A L+ M + + +++ ++ ++ + A ++ ++ VVA+
Sbjct: 313 GYSEEALDLYHEMRDSGVKMDHFTFSIIIRICSRLASVARAKQVHASLVRNGFGLDVVAN 372
Query: 165 NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVR 224
+++ + G+V AR VFD+M ++ +W+ +I Y G+ E ID+F M +EG+
Sbjct: 373 TALVDFYSKWGKVDDARHVFDRMSCRNIISWNALIAGYGNHGHGEEAIDMFEKMLREGMM 432
Query: 225 VNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLI 284
N + ++VLS C+ + G ++ + R D V ++ I+ L + L+
Sbjct: 433 PNHVTFLAVLSACSISGLFERGWEIFQSMTR---DHKVKPRAMHFACMIEL--LGREGLL 487
Query: 285 FDNFA-------SKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVT-LVGVLS 336
+ +A MW +++ +G E +++ G+ P+ ++ + +L+
Sbjct: 488 DEAYALIRKAPFQPTANMWAALLRACRVHGNLELGKFAAEKLY--GMEPEKLSNYIVLLN 545
Query: 337 ACSYTGKVKEGREIFESMKSKYL 359
+ +GK+KE ++F+++K K L
Sbjct: 546 IYNSSGKLKEAADVFQTLKRKGL 568
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 97/201 (48%), Gaps = 4/201 (1%)
Query: 209 LEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVL 268
LE+ ++F L ++G V + + ++++ C L S+ +++ +V F+ D Y+ + +
Sbjct: 116 LEMFEIFEL--EDGFHVGYSTYDALINACIGLKSIRGVKRLCNYMVDNGFEPDQYMRNRV 173
Query: 269 ITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDD 328
+ M++KCG ++ +FD +++ V W +IISGY G ++ ++F M
Sbjct: 174 LLMHVKCGMMIDACRLFDEMPARNAVSWGTIISGYVDSGNYVEAFRLFILMREEFYDCGP 233
Query: 329 VTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIE 388
T ++ A + + GR++ S K + ++D+ + G +EDA + +
Sbjct: 234 RTFATMIRASAGLEIIFPGRQL-HSCAIKAGLGQDIFVSCALIDMYSKCGSLEDAHCVFD 292
Query: 389 AMPFEPDAIIWGSLLGACRTH 409
MP + + W S++ H
Sbjct: 293 EMP-DKTIVGWNSIIAGYALH 312
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/279 (17%), Positives = 122/279 (43%), Gaps = 56/279 (20%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEK------------------------- 35
MP++ +V W +++ GY G EA L+ +M +
Sbjct: 294 MPDKTIVGWNSIIAGYALHGYSEEALDLYHEMRDSGVKMDHFTFSIIIRICSRLASVARA 353
Query: 36 --------------NVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQD 81
+VV+ T ++ + + ++DDAR +FD M +++++ ++ GY
Sbjct: 354 KQVHASLVRNGFGLDVVANTALVDFYSKWGKVDDARHVFDRMSCRNIISWNALIAGYGNH 413
Query: 82 GRVDEGREIFDEMPKK----NVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAM- 136
G +E ++F++M ++ N +++ ++S + + ++F+ M ++V AM
Sbjct: 414 GHGEEAIDMFEKMLREGMMPNHVTFLAVLSACSISGLFERGWEIFQSMTRDHKVKPRAMH 473
Query: 137 ------LMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQ-NGEVQKARVVFDQ--- 186
L+G G + +A+ L + P + + +L + +G ++ + ++
Sbjct: 474 FACMIELLGRE--GLLDEAYALIRKAPFQPTANMWAALLRACRVHGNLELGKFAAEKLYG 531
Query: 187 MREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRV 225
M + + + ++ +Y G E D+F ++++G+R+
Sbjct: 532 MEPEKLSNYIVLLNIYNSSGKLKEAADVFQTLKRKGLRM 570
>gi|356496086|ref|XP_003516901.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Glycine max]
Length = 605
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 205/528 (38%), Positives = 321/528 (60%), Gaps = 10/528 (1%)
Query: 82 GRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEK----NEVSWTAML 137
G ++ IF ++ + + TMI G VN+ ++ A L+ M E+ + ++ +L
Sbjct: 79 GSMEYACSIFRQIEEPGSFEYNTMIRGNVNSMDLEEALLLYVEMLERGIEPDNFTYPFVL 138
Query: 138 MGYTQCGRIQDAWEL----FKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDA 193
+ +++ ++ F A V N +I G+ G ++ A VVF+QM EK A
Sbjct: 139 KACSLLVALKEGVQIHAHVFNAGLEVDVFVQNGLISMYGKCGAIEHAGVVFEQMDEKSVA 198
Query: 194 TWSGMIKVYERKGYELEVIDLFTLMQKEGV-RVNFPSLISVLSVCASLASLDHGRQVHAQ 252
+WS +I + E + L M +EG R L+S LS C L S + GR +H
Sbjct: 199 SWSSIIGAHASVEMWHECLMLLGDMSREGRHRAEESILVSALSACTHLGSPNLGRCIHGI 258
Query: 253 LVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKS 312
L+R +++V V + LI MY+KCG L KG +F N A K+ + +I+G A +G G ++
Sbjct: 259 LLRNISELNVVVKTSLIDMYVKCGSLEKGLCVFQNMAHKNRYSYTVMIAGLAIHGRGREA 318
Query: 313 LKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVD 372
L+VF +M G+ PDDV VGVLSACS+ G VKEG + F M+ +++++P +HY CMVD
Sbjct: 319 LRVFSDMLEEGLTPDDVVYVGVLSACSHAGLVKEGFQCFNRMQFEHMIKPTIQHYGCMVD 378
Query: 373 LLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGP 432
L+GRAG +++A LI++MP +P+ ++W SLL AC+ H L++ E+AA + +L N G
Sbjct: 379 LMGRAGMLKEAYDLIKSMPIKPNDVVWRSLLSACKVHHNLEIGEIAADNIFKLNKHNPGD 438
Query: 433 YILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPM 492
Y++L+N+YA ++ +VA +R M ++N+++ PG S +E + V+ F +D S P+
Sbjct: 439 YLVLANMYARAQKWANVARIRTEMVEKNLVQTPGFSLVEANRNVYKFVSQD-KSQPQCET 497
Query: 493 IMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIR 552
I M++++ L+ GY PD S VL DVDE+EK L++HS+KLA+A+ L++ EG P+R
Sbjct: 498 IYDMIQQMEWQLKFEGYTPDMSQVLLDVDEDEKRQRLKHHSQKLAIAFALIQTSEGSPVR 557
Query: 553 VMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
+ +NLR+C DCH+ K IS + REI +RD+NRFHHFKDG CSC+DYW
Sbjct: 558 ISRNLRMCNDCHTYTKFISVIYEREITVRDSNRFHHFKDGTCSCKDYW 605
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 110/252 (43%), Gaps = 18/252 (7%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF-D 61
E +V ++ Y + G I AG +F QM EK+V SW+ ++G + L D
Sbjct: 163 EVDVFVQNGLISMYGKCGAIEHAGVVFEQMDEKSVASWSSIIGAHASVEMWHECLMLLGD 222
Query: 62 MMPEKDVVAQTNMV---LGYCQD-GRVDEGREI----FDEMPKKNVISWTTMISGYVNNN 113
M E A+ +++ L C G + GR I + + NV+ T++I YV
Sbjct: 223 MSREGRHRAEESILVSALSACTHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKCG 282
Query: 114 RIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGL-- 171
++ +F+ M KN S+T M+ G GR ++A +F M + + + + +G+
Sbjct: 283 SLEKGLCVFQNMAHKNRYSYTVMIAGLAIHGRGREALRVFSDMLEEGLTPDDVVYVGVLS 342
Query: 172 --GQNGEVQKA-----RVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVR 224
G V++ R+ F+ M + + M+ + R G E DL M +
Sbjct: 343 ACSHAGLVKEGFQCFNRMQFEHMIKPTIQHYGCMVDLMGRAGMLKEAYDLIKSMPIKPND 402
Query: 225 VNFPSLISVLSV 236
V + SL+S V
Sbjct: 403 VVWRSLLSACKV 414
>gi|356545004|ref|XP_003540936.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic-like [Glycine max]
Length = 629
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 230/593 (38%), Positives = 335/593 (56%), Gaps = 32/593 (5%)
Query: 12 MVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQ 71
++R Y + I A LF NV +T ++ GF+ DA LF M K V+A
Sbjct: 65 LLRVYCKVNYIDHAIKLFRCTQNPNVYLYTSLIDGFVSFGSYTDAINLFCQMVRKHVLAD 124
Query: 72 TNMV---LGYCQDGR-VDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPE 127
V L C R + G+E+ + K SG + I A KL E+
Sbjct: 125 NYAVTAMLKACVLQRALGSGKEVHGLVLK----------SGLGLDRSI--ALKLVEL--- 169
Query: 128 KNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQM 187
Y +CG ++DA ++F MP + VVA MI G V++A VF++M
Sbjct: 170 ------------YGKCGVLEDARKMFDGMPERDVVACTVMIGSCFDCGMVEEAIEVFNEM 217
Query: 188 REKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGR 247
+D W+ +I R G +++F MQ +GV N + + VLS CA L +L+ GR
Sbjct: 218 GTRDTVCWTMVIDGLVRNGEFNRGLEVFREMQVKGVEPNEVTFVCVLSACAQLGALELGR 277
Query: 248 QVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYG 307
+HA + +C +V+ +VA LI MY +CG++ + + +FD KD+ +NS+I G A +G
Sbjct: 278 WIHAYMRKCGVEVNRFVAGALINMYSRCGDIDEAQALFDGVRVKDVSTYNSMIGGLALHG 337
Query: 308 LGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHY 367
+++++F EM V P+ +T VGVL+ACS+ G V G EIFESM+ + +EP+ EHY
Sbjct: 338 KSIEAVELFSEMLKERVRPNGITFVGVLNACSHGGLVDLGGEIFESMEMIHGIEPEVEHY 397
Query: 368 ACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEP 427
CMVD+LGR G++E+A I M E D + SLL AC+ H + + E AK L +
Sbjct: 398 GCMVDILGRVGRLEEAFDFIGRMGVEADDKMLCSLLSACKIHKNIGMGEKVAKLLSEHYR 457
Query: 428 KNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSH 487
++G +I+LSN YAS GR+ AE+R+ M K +IK PGCS IEV +H F D + H
Sbjct: 458 IDSGSFIMLSNFYASLGRWSYAAEVREKMEKGGIIKEPGCSSIEVNNAIHEFFSGD-LRH 516
Query: 488 PEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPE 547
PE I + LE++ L + GY P + LHD+D+E+K +L HSE+LA+ YGLV
Sbjct: 517 PERKRIYKKLEELNYLTKFEGYLPATEVALHDIDDEQKELALAVHSERLAICYGLVSTEA 576
Query: 548 GVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
+RV KNLR+C DCH+ IKLI+K+ R+I++RD NRFHHF++G CSC+DYW
Sbjct: 577 YTTLRVGKNLRICDDCHAMIKLIAKITRRKIVVRDRNRFHHFENGECSCKDYW 629
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 106/410 (25%), Positives = 175/410 (42%), Gaps = 86/410 (20%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV-------------------------VS 39
NV +T+++ G+V G T+A LF QM K+V V
Sbjct: 89 NVYLYTSLIDGFVSFGSYTDAINLFCQMVRKHVLADNYAVTAMLKACVLQRALGSGKEVH 148
Query: 40 WTVMLGGFIRDSRI--------------DDARRLFDMMPEKDVVAQTNMVLGYCQD-GRV 84
V+ G D I +DAR++FD MPE+DVVA T M+ G C D G V
Sbjct: 149 GLVLKSGLGLDRSIALKLVELYGKCGVLEDARKMFDGMPERDVVACTVMI-GSCFDCGMV 207
Query: 85 DEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMP----EKNEVSWTAMLMGY 140
+E E+F+EM ++ + WT +I G V N + ++F M E NEV++ +L
Sbjct: 208 EEAIEVFNEMGTRDTVCWTMVIDGLVRNGEFNRGLEVFREMQVKGVEPNEVTFVCVLSAC 267
Query: 141 TQCGRIQ-DAWELFKAMPMKSVVASNSMILGLGQN-----GEVQKARVVFDQMREKDDAT 194
Q G ++ W A K V N + G N G++ +A+ +FD +R KD +T
Sbjct: 268 AQLGALELGRW--IHAYMRKCGVEVNRFVAGALINMYSRCGDIDEAQALFDGVRVKDVST 325
Query: 195 WSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLV 254
++ MI G +E ++LF+ M KE VR N + + VL+ C+ +D G ++ +
Sbjct: 326 YNSMIGGLALHGKSIEAVELFSEMLKERVRPNGITFVGVLNACSHGGLVDLGGEIFESM- 384
Query: 255 RCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLK 314
E++ G ++ + ++ + G E++
Sbjct: 385 ----------------------EMIHG-------IEPEVEHYGCMVDILGRVGRLEEAFD 415
Query: 315 VFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKT 364
M GV DD L +LSAC + G ++ + + Y ++ +
Sbjct: 416 FIGRM---GVEADDKMLCSLLSACKIHKNIGMGEKVAKLLSEHYRIDSGS 462
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/217 (20%), Positives = 101/217 (46%), Gaps = 5/217 (2%)
Query: 245 HGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYA 304
H + +H ++ + D +VA L+ +Y K + +F + ++ ++ S+I G+
Sbjct: 42 HVQSIHCHAIKTRTSQDPFVAFELLRVYCKVNYIDHAIKLFRCTQNPNVYLYTSLIDGFV 101
Query: 305 QYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKT 364
+G ++ +F +M V+ D+ + +L AC + G+E+ + L ++
Sbjct: 102 SFGSYTDAINLFCQMVRKHVLADNYAVTAMLKACVLQRALGSGKEVHGLVLKSGLGLDRS 161
Query: 365 EHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQ 424
+V+L G+ G +EDA K+ + MP E D + ++G+C + E A + +
Sbjct: 162 IALK-LVELYGKCGVLEDARKMFDGMP-ERDVVACTVMIGSC---FDCGMVEEAIEVFNE 216
Query: 425 LEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNV 461
+ ++ + ++ + G F+ E+ + M+ + V
Sbjct: 217 MGTRDTVCWTMVIDGLVRNGEFNRGLEVFREMQVKGV 253
>gi|30794008|gb|AAP40452.1| unknown protein [Arabidopsis thaliana]
Length = 890
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 224/627 (35%), Positives = 346/627 (55%), Gaps = 31/627 (4%)
Query: 4 RNVVSWTAMVRGYVEEGMITEAGTLFWQM------PEKNVVSWTVMLGG---FIRDSRID 54
R++V+W ++ + + EA +M P++ +S + +R +
Sbjct: 265 RDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKEL 324
Query: 55 DARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNR 114
A L + +++ + +V YC +V GR +FD M + + W MI+GY N
Sbjct: 325 HAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEH 384
Query: 115 IDVARKLFEVMPEK-----NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSV----VASN 165
A LF M E N + ++ + G + + + + N
Sbjct: 385 DKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQN 444
Query: 166 SMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQ------ 219
+++ + G++ A +F +M ++D TW+ MI Y + + + L MQ
Sbjct: 445 TLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKV 504
Query: 220 -----KEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIK 274
+ ++ N +L+++L CA+L++L G+++HA ++ DV V S L+ MY K
Sbjct: 505 SKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAK 564
Query: 275 CGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGV 334
CG L + +FD K+++ WN II Y +G G++++ + M GV P++VT + V
Sbjct: 565 CGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISV 624
Query: 335 LSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEP 394
+ACS++G V EG IF MK Y VEP ++HYAC+VDLLGRAG++++A +L+ MP +
Sbjct: 625 FAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDF 684
Query: 395 D-AIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELR 453
+ A W SLLGA R H L++ E+AA+ L+QLEP A Y+LL+NIY+S G + E+R
Sbjct: 685 NKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVR 744
Query: 454 KNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDS 513
+NM+++ V K PGCSWIE +VH F D SHP+ + LE + +R+ GY PD+
Sbjct: 745 RNMKEQGVRKEPGCSWIEHGDEVHKFVAGDS-SHPQSEKLSGYLETLWERMRKEGYVPDT 803
Query: 514 SFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKV 573
S VLH+V+E+EK L HSEKLA+A+G++ G IRV KNLRVC DCH A K ISK+
Sbjct: 804 SCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKI 863
Query: 574 MGREIILRDANRFHHFKDGLCSCRDYW 600
+ REIILRD RFH FK+G CSC DYW
Sbjct: 864 VDREIILRDVRRFHRFKNGTCSCGDYW 890
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 85/350 (24%), Positives = 170/350 (48%), Gaps = 18/350 (5%)
Query: 68 VVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPE 127
V +V Y + G ++FD + ++N +SW ++IS + + ++A + F M +
Sbjct: 133 VTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLD 192
Query: 128 KN-EVSWTAMLMGYTQC-----------GRIQDAWELFKAMPMKSVVASNSMILGLGQNG 175
+N E S ++ T C G+ A+ L K ++ N+++ G+ G
Sbjct: 193 ENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFII--NTLVAMYGKLG 250
Query: 176 EVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLS 235
++ ++V+ +D TW+ ++ + LE ++ M EGV + ++ SVL
Sbjct: 251 KLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLP 310
Query: 236 VCASLASLDHGRQVHA-QLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIV 294
C+ L L G+++HA L D + +V S L+ MY C +++ G+ +FD + I
Sbjct: 311 ACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIG 370
Query: 295 MWNSIISGYAQYGLGEKSLKVFHEM-FSSGVMPDDVTLVGVLSACSYTGKVKEGREIFES 353
+WN++I+GY+Q +++L +F M S+G++ + T+ GV+ AC +G I
Sbjct: 371 LWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGF 430
Query: 354 MKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
+ + L + M D+ R G+++ AM++ M + D + W +++
Sbjct: 431 VVKRGLDRDRFVQNTLM-DMYSRLGKIDIAMRIFGKME-DRDLVTWNTMI 478
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 130/252 (51%), Gaps = 11/252 (4%)
Query: 160 SVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKV---YERKGYELEVIDLFT 216
SV +N+++ + G+ VFD++ E++ +W+ +I +E+ LE F
Sbjct: 132 SVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEA---FR 188
Query: 217 LMQKEGVRVNFPSLISVLSVCASLA---SLDHGRQVHAQLVRCQFDVDVYVASVLITMYI 273
M E V + +L+SV++ C++L L G+QVHA +R + +++ ++ + L+ MY
Sbjct: 189 CMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLR-KGELNSFIINTLVAMYG 247
Query: 274 KCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVG 333
K G+L K++ +F +D+V WN+++S Q ++L+ EM GV PD+ T+
Sbjct: 248 KLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISS 307
Query: 334 VLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFE 393
VL ACS+ ++ G+E+ ++ + + +VD+ QV ++ + M F+
Sbjct: 308 VLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGM-FD 366
Query: 394 PDAIIWGSLLGA 405
+W +++
Sbjct: 367 RKIGLWNAMIAG 378
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 124/282 (43%), Gaps = 38/282 (13%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEK-----------NVVSWTVMLGGFIR 49
M +R + W AM+ GY + EA LF M E VV V G F R
Sbjct: 364 MFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSR 423
Query: 50 DSRIDD--ARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMIS 107
I +R D +D Q ++ Y + G++D IF +M +++++W TMI+
Sbjct: 424 KEAIHGFVVKRGLD----RDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMIT 479
Query: 108 GYV---------------NNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWEL 152
GYV N V++ V + N ++ +L + E+
Sbjct: 480 GYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEI 539
Query: 153 FKAMPMKSVVASN-----SMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGY 207
A +K+ +A++ +++ + G +Q +R VFDQ+ +K+ TW+ +I Y G
Sbjct: 540 -HAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGN 598
Query: 208 ELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQV 249
E IDL +M +GV+ N + ISV + C+ +D G ++
Sbjct: 599 GQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRI 640
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 117/238 (49%), Gaps = 7/238 (2%)
Query: 195 WSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLV 254
W +++ R E + + M G++ + + ++L A L ++ G+Q+HA +
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 255 RCQFDVD-VYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSL 313
+ + VD V VA+ L+ +Y KCG+ +FD + ++ V WNS+IS + E +L
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 314 KVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHY--ACMV 371
+ F M V P TLV V++ACS + EG + + + + L + + + +V
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNL-PMPEGLMMGKQVHAYGLRKGELNSFIINTLV 243
Query: 372 DLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA-CRTHMKLDLAEVAAKKLLQ-LEP 427
+ G+ G++ + L+ + D + W ++L + C+ L+ E + +L+ +EP
Sbjct: 244 AMYGKLGKLASSKVLLGSFGGR-DLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEP 300
>gi|6706414|emb|CAB66100.1| putative protein [Arabidopsis thaliana]
Length = 803
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 227/627 (36%), Positives = 346/627 (55%), Gaps = 31/627 (4%)
Query: 4 RNVVSWTAMVRGYVEEGMITEAGTLFWQM------PEKNVVSWTVMLGG---FIRDSRID 54
R++V+W ++ + + EA +M P++ +S + +R +
Sbjct: 178 RDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKEL 237
Query: 55 DARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNR 114
A L + +++ + +V YC +V GR +FD M + + W MI+GY N
Sbjct: 238 HAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEH 297
Query: 115 IDVARKLFEVMPEK-----NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSV----VASN 165
A LF M E N + ++ + G + + + + N
Sbjct: 298 DKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQN 357
Query: 166 SMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQ------ 219
+++ + G++ A +F +M ++D TW+ MI Y + + + L MQ
Sbjct: 358 TLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKV 417
Query: 220 -KEGVRV----NFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIK 274
K RV N +L+++L CA+L++L G+++HA ++ DV V S L+ MY K
Sbjct: 418 SKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAK 477
Query: 275 CGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGV 334
CG L + +FD K+++ WN II Y +G G++++ + M GV P++VT + V
Sbjct: 478 CGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISV 537
Query: 335 LSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEP 394
+ACS++G V EG IF MK Y VEP ++HYAC+VDLLGRAG++++A +L+ MP +
Sbjct: 538 FAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDF 597
Query: 395 D-AIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELR 453
+ A W SLLGA R H L++ E+AA+ L+QLEP A Y+LL+NIY+S G + E+R
Sbjct: 598 NKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVR 657
Query: 454 KNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDS 513
+NM+++ V K PGCSWIE +VH F D SHP+ + LE + +R+ GY PD+
Sbjct: 658 RNMKEQGVRKEPGCSWIEHGDEVHKFVAGDS-SHPQSEKLSGYLETLWERMRKEGYVPDT 716
Query: 514 SFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKV 573
S VLH+V+E+EK L HSEKLA+A+G++ G IRV KNLRVC DCH A K ISK+
Sbjct: 717 SCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKI 776
Query: 574 MGREIILRDANRFHHFKDGLCSCRDYW 600
+ REIILRD RFH FK+G CSC DYW
Sbjct: 777 VDREIILRDVRRFHRFKNGTCSCGDYW 803
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 85/350 (24%), Positives = 170/350 (48%), Gaps = 18/350 (5%)
Query: 68 VVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPE 127
V +V Y + G ++FD + ++N +SW ++IS + + ++A + F M +
Sbjct: 46 VTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLD 105
Query: 128 KN-EVSWTAMLMGYTQC-----------GRIQDAWELFKAMPMKSVVASNSMILGLGQNG 175
+N E S ++ T C G+ A+ L K ++ N+++ G+ G
Sbjct: 106 ENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFII--NTLVAMYGKLG 163
Query: 176 EVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLS 235
++ ++V+ +D TW+ ++ + LE ++ M EGV + ++ SVL
Sbjct: 164 KLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLP 223
Query: 236 VCASLASLDHGRQVHA-QLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIV 294
C+ L L G+++HA L D + +V S L+ MY C +++ G+ +FD + I
Sbjct: 224 ACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIG 283
Query: 295 MWNSIISGYAQYGLGEKSLKVFHEM-FSSGVMPDDVTLVGVLSACSYTGKVKEGREIFES 353
+WN++I+GY+Q +++L +F M S+G++ + T+ GV+ AC +G I
Sbjct: 284 LWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGF 343
Query: 354 MKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
+ + L + M D+ R G+++ AM++ M + D + W +++
Sbjct: 344 VVKRGLDRDRFVQNTLM-DMYSRLGKIDIAMRIFGKME-DRDLVTWNTMI 391
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 130/252 (51%), Gaps = 11/252 (4%)
Query: 160 SVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKV---YERKGYELEVIDLFT 216
SV +N+++ + G+ VFD++ E++ +W+ +I +E+ LE F
Sbjct: 45 SVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEA---FR 101
Query: 217 LMQKEGVRVNFPSLISVLSVCASLA---SLDHGRQVHAQLVRCQFDVDVYVASVLITMYI 273
M E V + +L+SV++ C++L L G+QVHA +R + +++ ++ + L+ MY
Sbjct: 102 CMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLR-KGELNSFIINTLVAMYG 160
Query: 274 KCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVG 333
K G+L K++ +F +D+V WN+++S Q ++L+ EM GV PD+ T+
Sbjct: 161 KLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISS 220
Query: 334 VLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFE 393
VL ACS+ ++ G+E+ ++ + + +VD+ QV ++ + M F+
Sbjct: 221 VLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGM-FD 279
Query: 394 PDAIIWGSLLGA 405
+W +++
Sbjct: 280 RKIGLWNAMIAG 291
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 124/282 (43%), Gaps = 38/282 (13%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEK-----------NVVSWTVMLGGFIR 49
M +R + W AM+ GY + EA LF M E VV V G F R
Sbjct: 277 MFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSR 336
Query: 50 DSRIDD--ARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMIS 107
I +R D +D Q ++ Y + G++D IF +M +++++W TMI+
Sbjct: 337 KEAIHGFVVKRGLD----RDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMIT 392
Query: 108 GYV---------------NNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWEL 152
GYV N V++ V + N ++ +L + E+
Sbjct: 393 GYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEI 452
Query: 153 FKAMPMKSVVASN-----SMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGY 207
A +K+ +A++ +++ + G +Q +R VFDQ+ +K+ TW+ +I Y G
Sbjct: 453 -HAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGN 511
Query: 208 ELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQV 249
E IDL +M +GV+ N + ISV + C+ +D G ++
Sbjct: 512 GQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRI 553
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 105/206 (50%), Gaps = 10/206 (4%)
Query: 227 FPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVD-VYVASVLITMYIKCGELVKGKLIF 285
FP+L L A L ++ G+Q+HA + + + VD V VA+ L+ +Y KCG+ +F
Sbjct: 13 FPAL---LKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVF 69
Query: 286 DNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVK 345
D + ++ V WNS+IS + E +L+ F M V P TLV V++ACS +
Sbjct: 70 DRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNL-PMP 128
Query: 346 EGREIFESMKSKYLVEPKTEHY--ACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
EG + + + + L + + + +V + G+ G++ + L+ + D + W ++L
Sbjct: 129 EGLMMGKQVHAYGLRKGELNSFIINTLVAMYGKLGKLASSKVLLGSFGGR-DLVTWNTVL 187
Query: 404 GA-CRTHMKLDLAEVAAKKLLQ-LEP 427
+ C+ L+ E + +L+ +EP
Sbjct: 188 SSLCQNEQLLEALEYLREMVLEGVEP 213
>gi|449448586|ref|XP_004142047.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
[Cucumis sativus]
Length = 1037
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 224/629 (35%), Positives = 356/629 (56%), Gaps = 54/629 (8%)
Query: 22 ITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNM---VLGY 78
+ A F +N+V W VML + + + D+ +F M + ++ +L
Sbjct: 413 VETAHKFFLTTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRT 472
Query: 79 CQD-GRVDEGREIFDEMPKK----NVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSW 133
C G + G +I + K NV + +I Y ++ +A ++ +PE + VSW
Sbjct: 473 CTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSW 532
Query: 134 TAMLMGYTQCGRIQDAWELFKAMPMKSV-------------------------VASNSMI 168
TAM+ GY Q +A +LF+ M + + + + S
Sbjct: 533 TAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYA 592
Query: 169 LGLGQN--------------GEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDL 214
G G + G +Q+A + F+++ +K++ +W+ ++ + GY E + +
Sbjct: 593 AGFGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQSGYFEEALQV 652
Query: 215 FTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIK 274
F M + VN + S +S ASLA++ G+Q+H+ +++ +D + V++ LI++Y K
Sbjct: 653 FVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQIHSMVLKTGYDSEREVSNSLISLYAK 712
Query: 275 CGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGV 334
G + F++ + ++++ WN++I+GY+Q+G G ++L++F EM G+MP+ VT VGV
Sbjct: 713 SGSISDAWREFNDMSERNVISWNAMITGYSQHGCGMEALRLFEEMKVCGIMPNHVTFVGV 772
Query: 335 LSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEP 394
LSACS+ G VKEG + FESM + + PK+EHY C+VDLLGRAGQ++ AM+ I+ MP
Sbjct: 773 LSACSHIGLVKEGLDYFESMFKIHDLVPKSEHYVCVVDLLGRAGQLDRAMEYIKEMPIPA 832
Query: 395 DAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRK 454
DA+IW +LL AC H +++ E AA LL+LEP+++ Y+L+SNIYA ++ RK
Sbjct: 833 DAMIWRTLLSACVIHKNIEIGERAAHHLLELEPEDSATYVLISNIYAVSRQWIHRDWSRK 892
Query: 455 NMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLR---EAGYCP 511
M+ R V K PG SWIEV+ VH F D + HP+ ++ E IG L R E GY
Sbjct: 893 LMKDRGVKKEPGRSWIEVKNAVHAFYAGDKL----HPLTNQIYEYIGHLNRRTSEIGYVQ 948
Query: 512 DSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLIS 571
DS +L++ ++ +K HSEKLA+A+GL+ L +PIRVMKNLRVC DCH+ IK +S
Sbjct: 949 DSFSLLNESEQGQKDPITHVHSEKLAIAFGLLSLGNNIPIRVMKNLRVCNDCHNWIKYVS 1008
Query: 572 KVMGREIILRDANRFHHFKDGLCSCRDYW 600
K+ R II+RDA+RFHHF G+CSC+D+W
Sbjct: 1009 KISNRSIIVRDAHRFHHFDGGVCSCKDFW 1037
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 99/422 (23%), Positives = 194/422 (45%), Gaps = 26/422 (6%)
Query: 4 RNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMM 63
+++V+W AM+ G + G+ EA LF M + +L + S +LF++
Sbjct: 224 KDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSAS---TKIQLFELG 280
Query: 64 PE-----------KDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+ + +V Y + ++ IF M ++ +S+ ++ISG V
Sbjct: 281 EQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQ 340
Query: 113 NRIDVARKLFEVMP----EKNEVSWTAMLMGYTQCGRIQDAWEL----FKAMPMKSVVAS 164
D A +LF M + + ++ ++L G + +L KA ++
Sbjct: 341 GFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILE 400
Query: 165 NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVR 224
S++ + +V+ A F ++ W+ M+ Y + + ++F MQ EG+
Sbjct: 401 GSLLDLYSKCADVETAHKFFLTTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMI 460
Query: 225 VNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLI 284
N + S+L C SL +L G Q+H +++ F ++VYV SVLI MY K G+L I
Sbjct: 461 PNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRI 520
Query: 285 FDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKV 344
D+V W ++I+GY Q+ + ++L++F EM G+ D++ +SAC+ +
Sbjct: 521 LRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRAL 580
Query: 345 KEGREIF-ESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
++G++I +S + + + + ++ L R G++++A E + + + I W SL+
Sbjct: 581 RQGQQIHAQSYAAGFGADLSINN--ALISLYARCGRIQEAYLAFEKIG-DKNNISWNSLV 637
Query: 404 GA 405
Sbjct: 638 SG 639
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 101/451 (22%), Positives = 199/451 (44%), Gaps = 58/451 (12%)
Query: 11 AMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVA 70
++V Y G A +F + ++V SW M+ F+ LF M + +
Sbjct: 98 SLVDNYFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITP 157
Query: 71 QTNM---VLGYCQDGRVD-------EGREIFDEMPKKNVISWTTMISGYVNNNRIDVARK 120
VL C G + R + +++ +I Y N I+ A+K
Sbjct: 158 NGYTFAGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVA-NLLIDLYSKNGYIESAKK 216
Query: 121 LFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMP----------MKSVVASNSMI-- 168
+F + K+ V+W AM+ G +Q G ++A LF M + SV+++++ I
Sbjct: 217 VFNCICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQL 276
Query: 169 LGLGQ------------------NGEVQ---------KARVVFDQMREKDDATWSGMIKV 201
LG+ NG V A +F M +D +++ +I
Sbjct: 277 FELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISG 336
Query: 202 YERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVD 261
++G+ ++LFT MQ++ ++ + ++ S+LS CAS+ +L G Q+H+ ++ D
Sbjct: 337 LVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSAD 396
Query: 262 VYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFS 321
+ + L+ +Y KC ++ F +++IV+WN ++ Y Q S ++F +M
Sbjct: 397 IILEGSLLDLYSKCADVETAHKFFLTTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQM 456
Query: 322 SGVMPDDVTLVGVLSACSYTGKVKEGREIFES-MKSKYLVEPKTEHYAC--MVDLLGRAG 378
G++P+ T +L C+ G + G +I +K+ + + Y C ++D+ + G
Sbjct: 457 EGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNV----YVCSVLIDMYAKYG 512
Query: 379 QVEDAMKLIEAMPFEPDAIIWGSLLGACRTH 409
Q+ A++++ +P E D + W +++ H
Sbjct: 513 QLALALRILRRLP-EDDVVSWTAMIAGYVQH 542
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 125/283 (44%), Gaps = 44/283 (15%)
Query: 165 NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVR 224
+S++ ++G+ A VFD+ + +W+ MI V+ + +V LF M EG+
Sbjct: 97 DSLVDNYFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGIT 156
Query: 225 VNFPSLISVLSVC-ASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKL 283
N + VL C + ++ +QVH++ FD VA++LI +Y K G + K
Sbjct: 157 PNGYTFAGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKK 216
Query: 284 IFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSAC----- 338
+F+ KDIV W ++ISG +Q GL E+++ +F +M +S + P L VLSA
Sbjct: 217 VFNCICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQL 276
Query: 339 ------------------------------SYTGKVKEGREIFESMKSKYLVEPKTEHYA 368
S + K+ IF +M S+ V Y
Sbjct: 277 FELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVS-----YN 331
Query: 369 CMVDLLGRAGQVEDAMKLIEAMP---FEPDAIIWGSLLGACRT 408
++ L + G + A++L M +PD I SLL AC +
Sbjct: 332 SLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACAS 374
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 122/263 (46%), Gaps = 18/263 (6%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
+PE +VVSWTAM+ GYV+ M +EA LF +M + + + I A R
Sbjct: 524 LPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQG 583
Query: 61 DMMPEK--------DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+ + D+ ++ Y + GR+ E F+++ KN ISW +++SG +
Sbjct: 584 QQIHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQS 643
Query: 113 NRIDVARKLFEVM----PEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVV-----A 163
+ A ++F M E N ++ + + I+ ++ +M +K+
Sbjct: 644 GYFEEALQVFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQI-HSMVLKTGYDSEREV 702
Query: 164 SNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGV 223
SNS+I ++G + A F+ M E++ +W+ MI Y + G +E + LF M+ G+
Sbjct: 703 SNSLISLYAKSGSISDAWREFNDMSERNVISWNAMITGYSQHGCGMEALRLFEEMKVCGI 762
Query: 224 RVNFPSLISVLSVCASLASLDHG 246
N + + VLS C+ + + G
Sbjct: 763 MPNHVTFVGVLSACSHIGLVKEG 785
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 89/201 (44%), Gaps = 15/201 (7%)
Query: 212 IDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITM 271
I L M++ GVR N+ + + +L C + SL ++H ++ + FD + + L+
Sbjct: 43 IQLMNFMEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDN 102
Query: 272 YIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTL 331
Y + G+ +FD +++ + WN +I + + +F M + G+ P+ T
Sbjct: 103 YFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTF 162
Query: 332 VGVLSAC-------SYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAM 384
GVL AC +Y +V R + S LV ++DL + G +E A
Sbjct: 163 AGVLKACVGGDIAFNYVKQV-HSRTFYYGFDSSPLVAN------LLIDLYSKNGYIESAK 215
Query: 385 KLIEAMPFEPDAIIWGSLLGA 405
K+ + + D + W +++
Sbjct: 216 KVFNCICMK-DIVTWVAMISG 235
>gi|30694644|ref|NP_191302.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218525905|sp|Q7Y211.2|PP285_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g57430, chloroplastic; Flags: Precursor
gi|332646133|gb|AEE79654.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 890
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 224/627 (35%), Positives = 346/627 (55%), Gaps = 31/627 (4%)
Query: 4 RNVVSWTAMVRGYVEEGMITEAGTLFWQM------PEKNVVSWTVMLGG---FIRDSRID 54
R++V+W ++ + + EA +M P++ +S + +R +
Sbjct: 265 RDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKEL 324
Query: 55 DARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNR 114
A L + +++ + +V YC +V GR +FD M + + W MI+GY N
Sbjct: 325 HAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEH 384
Query: 115 IDVARKLFEVMPEK-----NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSV----VASN 165
A LF M E N + ++ + G + + + + N
Sbjct: 385 DKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQN 444
Query: 166 SMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQ------ 219
+++ + G++ A +F +M ++D TW+ MI Y + + + L MQ
Sbjct: 445 TLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKV 504
Query: 220 -----KEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIK 274
+ ++ N +L+++L CA+L++L G+++HA ++ DV V S L+ MY K
Sbjct: 505 SKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAK 564
Query: 275 CGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGV 334
CG L + +FD K+++ WN II Y +G G++++ + M GV P++VT + V
Sbjct: 565 CGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISV 624
Query: 335 LSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEP 394
+ACS++G V EG IF MK Y VEP ++HYAC+VDLLGRAG++++A +L+ MP +
Sbjct: 625 FAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDF 684
Query: 395 D-AIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELR 453
+ A W SLLGA R H L++ E+AA+ L+QLEP A Y+LL+NIY+S G + E+R
Sbjct: 685 NKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVR 744
Query: 454 KNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDS 513
+NM+++ V K PGCSWIE +VH F D SHP+ + LE + +R+ GY PD+
Sbjct: 745 RNMKEQGVRKEPGCSWIEHGDEVHKFVAGDS-SHPQSEKLSGYLETLWERMRKEGYVPDT 803
Query: 514 SFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKV 573
S VLH+V+E+EK L HSEKLA+A+G++ G IRV KNLRVC DCH A K ISK+
Sbjct: 804 SCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKI 863
Query: 574 MGREIILRDANRFHHFKDGLCSCRDYW 600
+ REIILRD RFH FK+G CSC DYW
Sbjct: 864 VDREIILRDVRRFHRFKNGTCSCGDYW 890
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 85/350 (24%), Positives = 170/350 (48%), Gaps = 18/350 (5%)
Query: 68 VVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPE 127
V +V Y + G ++FD + ++N +SW ++IS + + ++A + F M +
Sbjct: 133 VTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLD 192
Query: 128 KN-EVSWTAMLMGYTQC-----------GRIQDAWELFKAMPMKSVVASNSMILGLGQNG 175
+N E S ++ T C G+ A+ L K ++ N+++ G+ G
Sbjct: 193 ENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFII--NTLVAMYGKLG 250
Query: 176 EVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLS 235
++ ++V+ +D TW+ ++ + LE ++ M EGV + ++ SVL
Sbjct: 251 KLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLP 310
Query: 236 VCASLASLDHGRQVHA-QLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIV 294
C+ L L G+++HA L D + +V S L+ MY C +++ G+ +FD + I
Sbjct: 311 ACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIG 370
Query: 295 MWNSIISGYAQYGLGEKSLKVFHEM-FSSGVMPDDVTLVGVLSACSYTGKVKEGREIFES 353
+WN++I+GY+Q +++L +F M S+G++ + T+ GV+ AC +G I
Sbjct: 371 LWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGF 430
Query: 354 MKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
+ + L + M D+ R G+++ AM++ M + D + W +++
Sbjct: 431 VVKRGLDRDRFVQNTLM-DMYSRLGKIDIAMRIFGKME-DRDLVTWNTMI 478
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 130/252 (51%), Gaps = 11/252 (4%)
Query: 160 SVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKV---YERKGYELEVIDLFT 216
SV +N+++ + G+ VFD++ E++ +W+ +I +E+ LE F
Sbjct: 132 SVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEA---FR 188
Query: 217 LMQKEGVRVNFPSLISVLSVCASLA---SLDHGRQVHAQLVRCQFDVDVYVASVLITMYI 273
M E V + +L+SV++ C++L L G+QVHA +R + +++ ++ + L+ MY
Sbjct: 189 CMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLR-KGELNSFIINTLVAMYG 247
Query: 274 KCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVG 333
K G+L K++ +F +D+V WN+++S Q ++L+ EM GV PD+ T+
Sbjct: 248 KLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISS 307
Query: 334 VLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFE 393
VL ACS+ ++ G+E+ ++ + + +VD+ QV ++ + M F+
Sbjct: 308 VLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGM-FD 366
Query: 394 PDAIIWGSLLGA 405
+W +++
Sbjct: 367 RKIGLWNAMIAG 378
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 124/282 (43%), Gaps = 38/282 (13%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEK-----------NVVSWTVMLGGFIR 49
M +R + W AM+ GY + EA LF M E VV V G F R
Sbjct: 364 MFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSR 423
Query: 50 DSRIDD--ARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMIS 107
I +R D +D Q ++ Y + G++D IF +M +++++W TMI+
Sbjct: 424 KEAIHGFVVKRGLD----RDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMIT 479
Query: 108 GYV---------------NNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWEL 152
GYV N V++ V + N ++ +L + E+
Sbjct: 480 GYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEI 539
Query: 153 FKAMPMKSVVASN-----SMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGY 207
A +K+ +A++ +++ + G +Q +R VFDQ+ +K+ TW+ +I Y G
Sbjct: 540 -HAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGN 598
Query: 208 ELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQV 249
E IDL +M +GV+ N + ISV + C+ +D G ++
Sbjct: 599 GQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRI 640
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 117/238 (49%), Gaps = 7/238 (2%)
Query: 195 WSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLV 254
W +++ R E + + M G++ + + ++L A L ++ G+Q+HA +
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 255 RCQFDVD-VYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSL 313
+ + VD V VA+ L+ +Y KCG+ +FD + ++ V WNS+IS + E +L
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 314 KVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHY--ACMV 371
+ F M V P TLV V++ACS + EG + + + + L + + + +V
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNL-PMPEGLMMGKQVHAYGLRKGELNSFIINTLV 243
Query: 372 DLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA-CRTHMKLDLAEVAAKKLLQ-LEP 427
+ G+ G++ + L+ + D + W ++L + C+ L+ E + +L+ +EP
Sbjct: 244 AMYGKLGKLASSKVLLGSFGGR-DLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEP 300
>gi|296085005|emb|CBI28420.3| unnamed protein product [Vitis vinifera]
Length = 631
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 215/605 (35%), Positives = 336/605 (55%), Gaps = 60/605 (9%)
Query: 4 RNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV---VSWTVMLGGFIRDSRIDDARRLF 60
R+++ W +++ YVE + LF ++ + + + ++ G R + + +++
Sbjct: 79 RSLIHWNTIIKCYVENQFSHDGIVLFHELVHEYLPDNFTLPCVIKGCARLGVVQEGKQIH 138
Query: 61 DMMPE----KDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRID 116
+ + DV Q ++V Y + G +D R++FD M K+V+ W ++I G
Sbjct: 139 GLALKIGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDG-------- 190
Query: 117 VARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGE 176
N VSW AM+ GY + G A ELF MP+ +V N MI G
Sbjct: 191 ------------NLVSWNAMINGYMKSGDFDSALELFYQMPIWDLVTWNLMIAG------ 232
Query: 177 VQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSV 236
YE G ++ + +F +M K G R + +L+SVLS
Sbjct: 233 -------------------------YELNGQFMDAVKMFFMMLKLGSRPSHATLVSVLSA 267
Query: 237 CASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMW 296
+ LA L GR +H+ + + F++D + + LI MY KCG + +F K + W
Sbjct: 268 VSGLAVLGKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGCIESALTVFRAIQKKKVGHW 327
Query: 297 NSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKS 356
+II G +G+ +L +F EM +G+ P+ + +GVL+AC++ G V +GR+ F+ M +
Sbjct: 328 TAIIVGLGIHGMANHALALFLEMCKTGLKPNAIIFIGVLNACNHAGLVDDGRQYFDMMMN 387
Query: 357 KYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAE 416
+Y +EP EHY C+VD+L RAG +E+A IE MP P+ +IW SLLG R H K+D+ E
Sbjct: 388 EYKIEPTLEHYGCLVDILCRAGHLEEAKNTIENMPISPNKVIWMSLLGGSRNHGKIDIGE 447
Query: 417 VAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKV 476
AA++++++ P+ G YILLSN+YA+ G + V+ +R+ M KR K PGCS +E + +
Sbjct: 448 YAAQRVIEVAPETIGCYILLSNMYAASGMWEKVSHVREMMYKRGFRKDPGCSSVEHKGTL 507
Query: 477 HMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVD-EEEKVHSLRYHSEK 535
H F D +SHP+ I + ++ L+ G+ PD++ VL ++ E+EK L HSE+
Sbjct: 508 HEFIVGD-ISHPQTKEIYAKMSEMKEKLKCVGHVPDTTQVLLCIEGEKEKEAELENHSER 566
Query: 536 LAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCS 595
LA+A+GL+ + G+PIR+MKNLRVC DCHS KL+SK+ REII+RD RFHHFK+G CS
Sbjct: 567 LAIAFGLINVKPGIPIRIMKNLRVCNDCHSVTKLLSKIYSREIIVRDNCRFHHFKNGSCS 626
Query: 596 CRDYW 600
C DYW
Sbjct: 627 CMDYW 631
Score = 43.1 bits (100), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 69/171 (40%), Gaps = 18/171 (10%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM-------PEKNVVSWTVMLGGFIRDSRI 53
MP ++V+W M+ GY G +A +F+ M +VS + G + +
Sbjct: 218 MPIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKLGSRPSHATLVSVLSAVSGL---AVL 274
Query: 54 DDARRLFDMMP----EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGY 109
R + M E D + T+++ Y + G ++ +F + KK V WT +I G
Sbjct: 275 GKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGCIESALTVFRAIQKKKVGHWTAIIVGL 334
Query: 110 VNNNRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAM 156
+ + A LF M + N + + +L G + D + F M
Sbjct: 335 GIHGMANHALALFLEMCKTGLKPNAIIFIGVLNACNHAGLVDDGRQYFDMM 385
>gi|449453904|ref|XP_004144696.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Cucumis sativus]
Length = 840
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 223/618 (36%), Positives = 339/618 (54%), Gaps = 55/618 (8%)
Query: 1 MPER-NVVSWTAMVRGYVEEGMITEAGTLFWQMP----EKNVVSWTVMLGGFIRDSRIDD 55
+P+R N V WTAM+ GY + G +A F +M E N ++ +L S
Sbjct: 195 LPDRKNYVQWTAMLTGYAQNGESLKAIQCFKEMRNQGMESNHFTFPSILTACTSISAYAF 254
Query: 56 ARRLFDMMP----EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVN 111
R++ + +V Q+ +V Y + G + R I D M +V+ W +MI G V
Sbjct: 255 GRQVHGCIIWSGFGPNVYVQSALVDMYAKCGDLASARMILDTMEIDDVVCWNSMIVGCVT 314
Query: 112 NNRIDVARKLFEVMPEKN----EVSWTAMLMGYTQCGRIQDAWELFKAMPMKS-----VV 162
+ ++ A LF M ++ + ++ ++L C ++ E ++ +K+
Sbjct: 315 HGYMEEALVLFHKMHNRDIRIDDFTYPSVLKSLASCKNLKIG-ESVHSLTIKTGFDACKT 373
Query: 163 ASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEG 222
SN+++ + G + A VF+++ +KD +W+ ++ Y G+ + + LF M+
Sbjct: 374 VSNALVDMYAKQGNLSCALDVFNKILDKDVISWTSLVTGYVHNGFHEKALQLFCDMRTAR 433
Query: 223 VRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGK 282
V ++ + V S CA L ++ GRQVHA ++ + + LITMY KCG L
Sbjct: 434 VDLDQFVVACVFSACAELTVIEFGRQVHANFIKSSAGSLLSAENSLITMYAKCGCLEDAI 493
Query: 283 LIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTG 342
+FD+ +++++ W +II GYAQ GL
Sbjct: 494 RVFDSMETRNVISWTAIIVGYAQNGL---------------------------------- 519
Query: 343 KVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSL 402
V+ G+ FESM+ Y ++P ++HYACM+DLLGRAG++ +A L+ M EPDA IW SL
Sbjct: 520 -VETGQSYFESMEKVYGIKPASDHYACMIDLLGRAGKINEAEHLLNRMDVEPDATIWKSL 578
Query: 403 LGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVI 462
L ACR H L+L E A K L++LEP N+ PY+LLSN+++ GR+ D A +R+ M+ +
Sbjct: 579 LSACRVHGNLELGERAGKNLIKLEPSNSLPYVLLSNMFSVAGRWEDAAHIRRAMKTMGIN 638
Query: 463 KPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDE 522
K PG SWIE++ +VH F D SHP I ++++ L++EAG+ PD +F L D+DE
Sbjct: 639 KEPGYSWIEMKSQVHTFISED-RSHPLAAEIYSKIDEMMILIKEAGHVPDMNFALRDMDE 697
Query: 523 EEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRD 582
E K SL YHSEKLAVA+GL+ + +G PIR+ KNLRVCGDCHSA+K IS + R IILRD
Sbjct: 698 EAKERSLAYHSEKLAVAFGLLTVAKGAPIRIFKNLRVCGDCHSAMKYISSIFKRHIILRD 757
Query: 583 ANRFHHFKDGLCSCRDYW 600
N FHHF +G CSC D+W
Sbjct: 758 LNCFHHFIEGKCSCGDFW 775
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 106/401 (26%), Positives = 179/401 (44%), Gaps = 73/401 (18%)
Query: 43 MLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISW 102
+L ++ R+D+AR+LFD MP +D M+ Y G + E R++F+E P KN I+W
Sbjct: 43 LLSELSKNGRVDEARKLFDQMPYRDKYTWNIMISAYANLGNLVEARKLFNETPIKNSITW 102
Query: 103 TTMISGYVNNN-RIDVARKL--------------------------------------FE 123
++++SGY N ++ R+ +
Sbjct: 103 SSLVSGYCKNGCEVEGLRQFSQMWSDGQKPSQYTLGSVLRACSTLSLLHTGKMIHCYAIK 162
Query: 124 VMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMP-MKSVVASNSMILGLGQNGEVQKARV 182
+ E N T ++ Y++C + +A LF ++P K+ V +M+ G QNGE KA
Sbjct: 163 IQLEANIFVATGLVDMYSKCKCLLEAEYLFFSLPDRKNYVQWTAMLTGYAQNGESLKAIQ 222
Query: 183 VFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLAS 242
F +MR +G+ N + S+L+ C S+++
Sbjct: 223 CFKEMR-------------------------------NQGMESNHFTFPSILTACTSISA 251
Query: 243 LDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISG 302
GRQVH ++ F +VYV S L+ MY KCG+L ++I D D+V WNS+I G
Sbjct: 252 YAFGRQVHGCIIWSGFGPNVYVQSALVDMYAKCGDLASARMILDTMEIDDVVCWNSMIVG 311
Query: 303 YAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEP 362
+G E++L +FH+M + + DD T VL + + +K G + S+ K +
Sbjct: 312 CVTHGYMEEALVLFHKMHNRDIRIDDFTYPSVLKSLASCKNLKIGESV-HSLTIKTGFDA 370
Query: 363 KTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
+VD+ + G + A+ + + + D I W SL+
Sbjct: 371 CKTVSNALVDMYAKQGNLSCALDVFNKI-LDKDVISWTSLV 410
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 152/288 (52%), Gaps = 3/288 (1%)
Query: 136 MLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATW 195
+L ++ GR+ +A +LF MP + N MI G + +AR +F++ K+ TW
Sbjct: 43 LLSELSKNGRVDEARKLFDQMPYRDKYTWNIMISAYANLGNLVEARKLFNETPIKNSITW 102
Query: 196 SGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVR 255
S ++ Y + G E+E + F+ M +G + + +L SVL C++L+ L G+ +H ++
Sbjct: 103 SSLVSGYCKNGCEVEGLRQFSQMWSDGQKPSQYTLGSVLRACSTLSLLHTGKMIHCYAIK 162
Query: 256 CQFDVDVYVASVLITMYIKCGELVKGKLIFDNFAS-KDIVMWNSIISGYAQYGLGEKSLK 314
Q + +++VA+ L+ MY KC L++ + +F + K+ V W ++++GYAQ G K+++
Sbjct: 163 IQLEANIFVATGLVDMYSKCKCLLEAEYLFFSLPDRKNYVQWTAMLTGYAQNGESLKAIQ 222
Query: 315 VFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLL 374
F EM + G+ + T +L+AC+ GR++ + P + +VD+
Sbjct: 223 CFKEMRNQGMESNHFTFPSILTACTSISAYAFGRQVHGCIIWSGF-GPNVYVQSALVDMY 281
Query: 375 GRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKL 422
+ G + A +++ M + D + W S++ C TH ++ A V K+
Sbjct: 282 AKCGDLASARMILDTMEID-DVVCWNSMIVGCVTHGYMEEALVLFHKM 328
>gi|449451892|ref|XP_004143694.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Cucumis sativus]
Length = 673
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 219/619 (35%), Positives = 351/619 (56%), Gaps = 24/619 (3%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMP----EKNVVSWTVML----GGFIRDSR 52
+ E +++ W A+++GY ++ ++ ++ M N ++ +L G +
Sbjct: 60 VSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQISQVHPNCFTFLYVLKACGGTSVEGIG 119
Query: 53 IDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+ F +V Q ++V Y + G++ R +FD++ + V+SWT++ISGYV N
Sbjct: 120 KQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQN 179
Query: 113 NRIDVARKLFEVMPEKN-EVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVAS------- 164
A +F+ M + N + W A++ T ++D L + + +V
Sbjct: 180 GDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVED---LGQGKSIHGLVTKLGLEFEP 236
Query: 165 ---NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKE 221
S+ + G V+ AR F++M + + W+ MI Y GY E I LF M +
Sbjct: 237 DIVISLTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITK 296
Query: 222 GVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKG 281
+RV+ ++ S + A + SL+ R + + + ++ D +V + LI MY KCG +
Sbjct: 297 NIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLA 356
Query: 282 KLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYT 341
+ +FD A KD+V+W+ +I GY +G G++++ +++EM +GV P+D T +G+L+AC +
Sbjct: 357 RCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNS 416
Query: 342 GKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGS 401
G VKEG E+F M + +EP +HY+C+VDLLGRAG + A I +MP +P +WG+
Sbjct: 417 GLVKEGWELFHLMPD-HGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGA 475
Query: 402 LLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNV 461
LL AC+ H K+ L E+AA++L L+P N G Y+ LSN+YAS + VA +R M ++ +
Sbjct: 476 LLSACKIHRKVRLGEIAAEQLFILDPYNTGHYVQLSNLYASAHLWTRVANVRLMMTQKGL 535
Query: 462 IKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVD 521
K G S IE+ + F D SHP+ I L+++ L+ AGY P VLHD++
Sbjct: 536 NKDLGHSSIEINGNLETFQVGD-RSHPKSKEIFEELDRLEKRLKAAGYVPHMESVLHDLN 594
Query: 522 EEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILR 581
EE +L +HSE+LAVAYG++ G +R+ KNLR C +CHSAIKLISK++ REII+R
Sbjct: 595 HEEIEETLCHHSERLAVAYGIISTAPGTTLRITKNLRACINCHSAIKLISKLVDREIIIR 654
Query: 582 DANRFHHFKDGLCSCRDYW 600
DA RFHHFKDG+CSC D+W
Sbjct: 655 DAKRFHHFKDGVCSCGDFW 673
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/330 (22%), Positives = 163/330 (49%), Gaps = 10/330 (3%)
Query: 82 GRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLF------EVMPEKNEVSWTA 135
G V+ + F E+ + +++ W +I GY N +D +++ +V P +
Sbjct: 48 GDVNYAHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQISQVHPNCFTFLYVL 107
Query: 136 MLMGYTQCGRI--QDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDA 193
G T I Q + FK +V NS++ + G++ AR+VFD++ ++
Sbjct: 108 KACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYARIVFDKLHDRTVV 167
Query: 194 TWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQL 253
+W+ +I Y + G +E +++F M++ V+ ++ +L+SV++ ++ L G+ +H +
Sbjct: 168 SWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLV 227
Query: 254 VRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSL 313
+ + + + L TMY K G + + F+ ++++WN++ISGYA G GE+++
Sbjct: 228 TKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANNGYGEEAI 287
Query: 314 KVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDL 373
K+F EM + + D +T+ + A + G ++ R + + SK T ++D+
Sbjct: 288 KLFREMITKNIRVDSITMRSAVLASAQVGSLELARWL-DGYISKSEYRDDTFVNTGLIDM 346
Query: 374 LGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
+ G + A + + + + D ++W ++
Sbjct: 347 YAKCGSIYLARCVFDRVA-DKDVVLWSVMI 375
>gi|414883627|tpg|DAA59641.1| TPA: hypothetical protein ZEAMMB73_113196 [Zea mays]
Length = 637
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 207/527 (39%), Positives = 309/527 (58%), Gaps = 17/527 (3%)
Query: 90 IFDEMPKKNVISWTTMISGYVNNNRID------VARKLFEVMPEKNEVSW---------T 134
+F +P++N S+T +++ N+ + +A + V
Sbjct: 112 LFPRLPRRNPHSFTFLLASLSNHLDTEPAAAGSIASRFMGTHVHALAVKAGAAGDLYVRN 171
Query: 135 AMLMGYTQCGRIQDAWELFKAMPM-KSVVASNSMILGLGQNGEVQKARVVFDQMREKDDA 193
A + Y CG + ++F +P+ + VV N+++ G + G V AR VFD M +D+
Sbjct: 172 AQIHFYGVCGDVAAMRKVFDELPIVRDVVTWNAVLAGYVRAGMVGVAREVFDGMPVRDEV 231
Query: 194 TWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQL 253
+WS +I Y ++G + +F M +GV+ N ++++ LS A L L+ G+ VH +
Sbjct: 232 SWSTVIGGYVKEGEPEVALGVFKNMVAQGVKANEAAIVTALSAAAQLGLLEQGKFVHEVV 291
Query: 254 VRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSL 313
R + V + + LI MY KCG + K +FD +D+ WNS+I G A +GLG ++
Sbjct: 292 KRVGMTMSVNLGAALIDMYSKCGSVAAAKEVFDAMPRRDVFAWNSMICGLATHGLGHDAV 351
Query: 314 KVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDL 373
++F + S G P +T VGVL+ACS TG V EGR F+ M KY +E + EHY CMVDL
Sbjct: 352 QLFEKFVSEGFCPTSITFVGVLNACSRTGLVDEGRRYFKLMAEKYDIESEMEHYGCMVDL 411
Query: 374 LGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPY 433
L RAG V++A++LIE M PD ++WG++L AC+ H +DL KL++L+P + G Y
Sbjct: 412 LSRAGLVQEAVELIEGMRIPPDPVLWGTILSACKRHGLVDLGITVGNKLIELDPAHDGYY 471
Query: 434 ILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMI 493
+LL++IYA ++ +V ++RK M R K G S +E VH F D ++H + I
Sbjct: 472 VLLASIYAKAKKWDEVRKVRKLMSNRGTSKSAGWSLMEAHGIVHKFLVGD-MNHKDSARI 530
Query: 494 MRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRV 553
ML I L EAGY PD S VLHD+ +EEKVH+++ HSE+LA+AYG + + G PIR+
Sbjct: 531 YNMLCTINRRLAEAGYVPDVSSVLHDIGDEEKVHAIKVHSERLAIAYGFIVVEAGSPIRI 590
Query: 554 MKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
+KNL VCGDCH K+++KV GREI++RD +RFHH KDG CSC DYW
Sbjct: 591 VKNLSVCGDCHEFSKMVTKVFGREIVVRDGSRFHHMKDGKCSCHDYW 637
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 136/292 (46%), Gaps = 56/292 (19%)
Query: 77 GYCQDGRVDEGREIFDEMP-KKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTA 135
G C D V R++FDE+P ++V++W +++GYV + VAR++F+ MP ++EVSW+
Sbjct: 178 GVCGD--VAAMRKVFDELPIVRDVVTWNAVLAGYVRAGMVGVAREVFDGMPVRDEVSWST 235
Query: 136 MLMGYTQCGRIQDAWELFKAMPMKSVVASNSMI---------LGLGQNGE---------- 176
++ GY + G + A +FK M + V A+ + I LGL + G+
Sbjct: 236 VIGGYVKEGEPEVALGVFKNMVAQGVKANEAAIVTALSAAAQLGLLEQGKFVHEVVKRVG 295
Query: 177 --------------------VQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFT 216
V A+ VFD M +D W+ MI G + + LF
Sbjct: 296 MTMSVNLGAALIDMYSKCGSVAAAKEVFDAMPRRDVFAWNSMICGLATHGLGHDAVQLFE 355
Query: 217 LMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVA--SVLITMYIK 274
EG + + VL+ C+ +D GR+ + +L+ ++D++ + ++ + +
Sbjct: 356 KFVSEGFCPTSITFVGVLNACSRTGLVDEGRR-YFKLMAEKYDIESEMEHYGCMVDLLSR 414
Query: 275 CG------ELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMF 320
G EL++G I D V+W +I+S ++GL + + V +++
Sbjct: 415 AGLVQEAVELIEGMRI-----PPDPVLWGTILSACKRHGLVDLGITVGNKLI 461
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 146/316 (46%), Gaps = 28/316 (8%)
Query: 4 RNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMM 63
R+VV+W A++ GYV GM+ A +F MP ++ VSW+ ++GG++++ + A +F M
Sbjct: 197 RDVVTWNAVLAGYVRAGMVGVAREVFDGMPVRDEVSWSTVIGGYVKEGEPEVALGVFKNM 256
Query: 64 PEKDVVAQTNMVL----GYCQDGRVDEGREIFDEMPK----KNVISWTTMISGYVNNNRI 115
+ V A ++ Q G +++G+ + + + + +V +I Y +
Sbjct: 257 VAQGVKANEAAIVTALSAAAQLGLLEQGKFVHEVVKRVGMTMSVNLGAALIDMYSKCGSV 316
Query: 116 DVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGL---- 171
A+++F+ MP ++ +W +M+ G G DA +LF+ + ++ +G+
Sbjct: 317 AAAKEVFDAMPRRDVFAWNSMICGLATHGLGHDAVQLFEKFVSEGFCPTSITFVGVLNAC 376
Query: 172 GQNGEVQKARVVFDQMREKDDAT-----WSGMIKVYERKGYELEVIDLFTLMQKEGVRVN 226
+ G V + R F M EK D + M+ + R G E ++L EG+R+
Sbjct: 377 SRTGLVDEGRRYFKLMAEKYDIESEMEHYGCMVDLLSRAGLVQEAVELI-----EGMRIP 431
Query: 227 FPSLI--SVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKC---GELVKG 281
++ ++LS C +D G V +L+ D Y +L ++Y K E+ K
Sbjct: 432 PDPVLWGTILSACKRHGLVDLGITVGNKLIELDPAHDGYYV-LLASIYAKAKKWDEVRKV 490
Query: 282 KLIFDNFASKDIVMWN 297
+ + N + W+
Sbjct: 491 RKLMSNRGTSKSAGWS 506
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 99/224 (44%), Gaps = 18/224 (8%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV----VSWTVMLGGFIRDSRIDDA 56
MP R+ VSW+ ++ GYV+EG A +F M + V + L + ++
Sbjct: 225 MPVRDEVSWSTVIGGYVKEGEPEVALGVFKNMVAQGVKANEAAIVTALSAAAQLGLLEQG 284
Query: 57 RRLFDMMPEKDVVAQTNMVLG----YCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+ + +++ + N+ Y + G V +E+FD MP+++V +W +MI G +
Sbjct: 285 KFVHEVVKRVGMTMSVNLGAALIDMYSKCGSVAAAKEVFDAMPRRDVFAWNSMICGLATH 344
Query: 113 NRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVAS---- 164
A +LFE + +++ +L ++ G + + FK M K + S
Sbjct: 345 GLGHDAVQLFEKFVSEGFCPTSITFVGVLNACSRTGLVDEGRRYFKLMAEKYDIESEMEH 404
Query: 165 -NSMILGLGQNGEVQKARVVFDQMR-EKDDATWSGMIKVYERKG 206
M+ L + G VQ+A + + MR D W ++ +R G
Sbjct: 405 YGCMVDLLSRAGLVQEAVELIEGMRIPPDPVLWGTILSACKRHG 448
>gi|449445401|ref|XP_004140461.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Cucumis sativus]
Length = 697
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 214/641 (33%), Positives = 351/641 (54%), Gaps = 54/641 (8%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVV 69
+++ YV+ ++ A LF MP +NVVSW+ ++ G++++ + LF M KD +
Sbjct: 61 NSLINLYVKCDEVSIARKLFDSMPRRNVVSWSALMAGYMQNGNPLEVFELFKKMVVKDNI 120
Query: 70 AQTNMVLG---------------------------------------YCQDGRVDEGREI 90
V+ Y + V +I
Sbjct: 121 FPNEYVIATAISSCDSQMYVEGKQCHGYALKSGLEFHQYVKNALIQLYSKCSDVGAAIQI 180
Query: 91 FDEMPKKNVISWTTMISGYVNNNR----IDVARKLFEVMPEKNEVSWTAMLMGYTQCGRI 146
+P ++ + +++G + + +DV + + E N ++ + + C +
Sbjct: 181 LYTVPGNDIFCYNLVVNGLLQHTHMAEAVDVLKLIISEGIEWNNATYVTI---FRLCASL 237
Query: 147 QDAW--ELFKAMPMKS-----VVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMI 199
+D + A +KS V +S+I G+ G V R FD+++ ++ +W+ +I
Sbjct: 238 KDITLGKQVHAQMLKSDIDCDVYIGSSIIDMYGKCGNVLSGRTFFDRLQSRNVVSWTSII 297
Query: 200 KVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFD 259
Y + + E ++LF+ M+ + + N ++ + + A L++L G Q+HA+ +
Sbjct: 298 AAYFQNEFFEEALNLFSKMEIDCIPPNEYTMAVLFNSAAGLSALCLGDQLHARAEKSGLK 357
Query: 260 VDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEM 319
+V V + LI MY K G+++ + +F N +I+ WN+II+G++ +GLG+++L +F +M
Sbjct: 358 GNVMVGNALIIMYFKSGDILAAQSVFSNMTCCNIITWNAIITGHSHHGLGKEALSMFQDM 417
Query: 320 FSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQ 379
++G P+ VT +GV+ AC++ V EG F + ++ + P EHY C+V LL R+G+
Sbjct: 418 MATGERPNYVTFIGVILACAHLKLVDEGFYYFNHLMKQFRIVPGLEHYTCIVGLLSRSGR 477
Query: 380 VEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNI 439
+++A + + D + W +LL AC H D A+ LLQLEP++ G YILLSN+
Sbjct: 478 LDEAENFMRSHQINWDVVSWRTLLNACYVHKHYDKGRKIAEYLLQLEPRDVGTYILLSNM 537
Query: 440 YASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEK 499
+A R+ V E+RK MR+RNV K PG SW+E+ H+FT D + HPE +I ++
Sbjct: 538 HARVRRWDHVVEIRKLMRERNVKKEPGVSWLEIRNVAHVFTSED-IKHPEANLIYENVKD 596
Query: 500 IGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRV 559
+ +R GY PD VLHD+++E+KV +L YHSEKLAVAYGL+K P G PI V+KNLR+
Sbjct: 597 LLSKIRPLGYVPDIDNVLHDIEDEQKVDNLSYHSEKLAVAYGLMKTPSGAPITVIKNLRM 656
Query: 560 CGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
C DCH+AIKLISKV R I++RDANRFHHF++G CSC DYW
Sbjct: 657 CDDCHTAIKLISKVANRVIVVRDANRFHHFQNGCCSCGDYW 697
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 144/281 (51%), Gaps = 11/281 (3%)
Query: 69 VAQTNMVLG-YCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPE 127
V Q N ++ Y + V R++FD MP++NV+SW+ +++GY+ N +LF+ M
Sbjct: 57 VNQLNSLINLYVKCDEVSIARKLFDSMPRRNVVSWSALMAGYMQNGNPLEVFELFKKMVV 116
Query: 128 KNEV--SWTAMLMGYTQC-------GRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQ 178
K+ + + + + C G+ + L + V N++I + +V
Sbjct: 117 KDNIFPNEYVIATAISSCDSQMYVEGKQCHGYALKSGLEFHQYV-KNALIQLYSKCSDVG 175
Query: 179 KARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCA 238
A + + D ++ ++ + + E +D+ L+ EG+ N + +++ +CA
Sbjct: 176 AAIQILYTVPGNDIFCYNLVVNGLLQHTHMAEAVDVLKLIISEGIEWNNATYVTIFRLCA 235
Query: 239 SLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNS 298
SL + G+QVHAQ+++ D DVY+ S +I MY KCG ++ G+ FD S+++V W S
Sbjct: 236 SLKDITLGKQVHAQMLKSDIDCDVYIGSSIIDMYGKCGNVLSGRTFFDRLQSRNVVSWTS 295
Query: 299 IISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACS 339
II+ Y Q E++L +F +M + P++ T+ + ++ +
Sbjct: 296 IIAAYFQNEFFEEALNLFSKMEIDCIPPNEYTMAVLFNSAA 336
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 82/166 (49%), Gaps = 8/166 (4%)
Query: 231 ISVLSVCASLASLDHGRQVHAQLVRCQF---DVDVYVASVLITMYIKCGELVKGKLIFDN 287
I +L V A +L GR +HA L D V + LI +Y+KC E+ + +FD+
Sbjct: 23 IKLLKVAADAKNLKFGRTIHAHLTITNHNYRDSKVNQLNSLINLYVKCDEVSIARKLFDS 82
Query: 288 FASKDIVMWNSIISGYAQYGLGEKSLKVFHEM-FSSGVMPDDVTLVGVLSACSYTGKVKE 346
+++V W+++++GY Q G + ++F +M + P++ + +S+C V E
Sbjct: 83 MPRRNVVSWSALMAGYMQNGNPLEVFELFKKMVVKDNIFPNEYVIATAISSCDSQMYV-E 141
Query: 347 GREIF-ESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMP 391
G++ ++KS ++ ++ L + V A++++ +P
Sbjct: 142 GKQCHGYALKSGLEFHQYVKN--ALIQLYSKCSDVGAAIQILYTVP 185
Score = 46.6 bits (109), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 32/168 (19%), Positives = 70/168 (41%), Gaps = 12/168 (7%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
+ RNVVSWT+++ Y + EA LF +M + + + A L
Sbjct: 285 LQSRNVVSWTSIIAAYFQNEFFEEALNLFSKMEIDCIPPNEYTMAVLFNSAAGLSALCLG 344
Query: 61 DMMPEK--------DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
D + + +V+ +++ Y + G + + +F M N+I+W +I+G+ ++
Sbjct: 345 DQLHARAEKSGLKGNVMVGNALIIMYFKSGDILAAQSVFSNMTCCNIITWNAIITGHSHH 404
Query: 113 NRIDVARKLFEVM----PEKNEVSWTAMLMGYTQCGRIQDAWELFKAM 156
A +F+ M N V++ +++ + + + F +
Sbjct: 405 GLGKEALSMFQDMMATGERPNYVTFIGVILACAHLKLVDEGFYYFNHL 452
>gi|6522552|emb|CAB61996.1| putative protein [Arabidopsis thaliana]
Length = 1229
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 218/604 (36%), Positives = 341/604 (56%), Gaps = 20/604 (3%)
Query: 12 MVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQ 71
++R Y + A +F ++PE+NV+ VM+ ++ + + ++F M +V
Sbjct: 80 LMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPD 139
Query: 72 TNM---VLGYCQ-DGRVDEGREIFDEMPKKNVISW----TTMISGYVNNNRIDVARKLFE 123
VL C G + GR+I K + S ++S Y + AR + +
Sbjct: 140 HYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLD 199
Query: 124 VMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSV---VASNSMILGLGQNGEVQKA 180
M ++ VSW ++++GY Q R DA E+ + M + + + +L N +
Sbjct: 200 EMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENV 259
Query: 181 RVVFD---QMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVC 237
V D +M +K +W+ MI VY + +E ++L++ M+ +G + S+ SVL C
Sbjct: 260 MYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPAC 319
Query: 238 ASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWN 297
++L G+++H + R + ++ + + LI MY KCG L K + +F+N S+D+V W
Sbjct: 320 GDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWT 379
Query: 298 SIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSK 357
++IS Y G G ++ +F ++ SG++PD + V L+ACS+ G ++EGR F+ M
Sbjct: 380 AMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDH 439
Query: 358 YLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEV 417
Y + P+ EH ACMVDLLGRAG+V++A + I+ M EP+ +WG+LLGACR H D+ +
Sbjct: 440 YKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLL 499
Query: 418 AAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVH 477
AA KL QL P+ +G Y+LLSNIYA GR+ +V +R M+ + + K PG S +EV + +H
Sbjct: 500 AADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIH 559
Query: 478 MFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLA 537
F D SHP+ I R L+ + ++E GY PDS LHDV+EE+K L HSEKLA
Sbjct: 560 TFLVGD-RSHPQSDEIYRELDVLVKKMKELGYVPDSESALHDVEEEDKETHLAVHSEKLA 618
Query: 538 VAYGLVKLPE-----GVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDG 592
+ + L+ E IR+ KNLR+CGDCH A KLIS++ REII+RD NRFH F+ G
Sbjct: 619 IVFALMNTKEEEEDSNNTIRITKNLRICGDCHVAAKLISQITSREIIIRDTNRFHVFRFG 678
Query: 593 LCSC 596
+CSC
Sbjct: 679 VCSC 682
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 77/169 (45%), Gaps = 2/169 (1%)
Query: 247 RQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQY 306
R VH++++ + + L+ Y ++ + +FD +++++ N +I Y
Sbjct: 59 RTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNN 118
Query: 307 GLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEH 366
G + +KVF M V PD T VL ACS +G + GR+I S +K +
Sbjct: 119 GFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGS-ATKVGLSSTLFV 177
Query: 367 YACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLA 415
+V + G+ G + +A +++ M D + W SL+ + + D A
Sbjct: 178 GNGLVSMYGKCGFLSEARLVLDEMS-RRDVVSWNSLVVGYAQNQRFDDA 225
Score = 43.5 bits (101), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 44/230 (19%), Positives = 94/230 (40%), Gaps = 34/230 (14%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMP 64
N++ A++ Y + G + +A +F M ++VVSWT M+ + R DA LF +
Sbjct: 343 NLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQ 402
Query: 65 EK----DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARK 120
+ D +A + G ++EGR F M
Sbjct: 403 DSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDH----------------------- 439
Query: 121 LFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQ-NGEVQK 179
+++ P ++ L+G + G++++A+ + M M+ +LG + + +
Sbjct: 440 -YKITPRLEHLACMVDLLG--RAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDI 496
Query: 180 ARVVFD---QMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVN 226
+ D Q+ + + + +Y + G EV ++ +M+ +G++ N
Sbjct: 497 GLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKN 546
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 78/178 (43%), Gaps = 21/178 (11%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVV----SWTVMLGGFIRDSRIDDA 56
M R+VVSWTAM+ Y G +A LF ++ + +V ++ L +++
Sbjct: 370 MKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEG 429
Query: 57 RRLFDMM-------PEKDVVAQTNMVLGYCQDGRVDEGREIFDEMP-KKNVISWTTMISG 108
R F +M P + +A +LG + G+V E +M + N W ++
Sbjct: 430 RSCFKLMTDHYKITPRLEHLACMVDLLG--RAGKVKEAYRFIQDMSMEPNERVWGALLGA 487
Query: 109 YVNNNRIDV----ARKLFEVMPEKNEVSWTAMLMG-YTQCGRIQDAWELFKAMPMKSV 161
++ D+ A KLF++ PE++ + +L Y + GR ++ + M K +
Sbjct: 488 CRVHSDTDIGLLAADKLFQLAPEQS--GYYVLLSNIYAKAGRWEEVTNIRNIMKSKGL 543
>gi|356557279|ref|XP_003546945.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 631
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 211/544 (38%), Positives = 311/544 (57%), Gaps = 24/544 (4%)
Query: 72 TNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPE---- 127
T +V Y + +FD++PK N+ W +I Y N + A L+ M E
Sbjct: 97 TKLVNFYSVCNSLRNAHHLFDKIPKGNLFLWNVLIRAYAWNGPHETAISLYHQMLEYGLK 156
Query: 128 KNEVSWTAMLMGYTQC-----GR------IQDAWELFKAMPMKSVVASNSMILGLGQNGE 176
+ + +L + GR I+ WE + V +++ + G
Sbjct: 157 PDNFTLPFVLKACSALSTIGEGRVIHERVIRSGWE-------RDVFVGAALVDMYAKCGC 209
Query: 177 VQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSV 236
V AR VFD++ ++D W+ M+ Y + G+ E + L M +GVR +L++V+S
Sbjct: 210 VVDARHVFDKIVDRDAVLWNSMLAAYAQNGHPDESLSLCCEMAAKGVRPTEATLVTVISS 269
Query: 237 CASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMW 296
A +A L HGR++H R F + V + LI MY KCG + ++F+ K +V W
Sbjct: 270 SADIACLPHGREIHGFGWRHGFQYNDKVKTALIDMYAKCGSVKVACVLFERLREKRVVSW 329
Query: 297 NSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKS 356
N+II+GYA +GL ++L +F M PD +T VG L+ACS + EGR ++ M
Sbjct: 330 NAIITGYAMHGLAVEALDLFERMMKEA-QPDHITFVGALAACSRGRLLDEGRALYNLMVR 388
Query: 357 KYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAE 416
+ P EHY CMVDLLG GQ+++A LI M PD+ +WG+LL +C+TH ++LAE
Sbjct: 389 DCRINPTVEHYTCMVDLLGHCGQLDEAYDLIRQMDVMPDSGVWGALLNSCKTHGNVELAE 448
Query: 417 VAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKV 476
VA +KL++LEP ++G Y++L+N+YA G++ VA LR+ M + + K CSWIEV+ KV
Sbjct: 449 VALEKLIELEPDDSGNYVILANMYAQSGKWEGVARLRQLMIDKGIKKNIACSWIEVKNKV 508
Query: 477 HMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKL 536
+ F D VSHP I L+++ GL+REAGY PD+ V HDV+E+EK + HSE+L
Sbjct: 509 YAFLSGD-VSHPNSGAIYAELKRLEGLMREAGYVPDTGSVFHDVEEDEKTDMVCSHSERL 567
Query: 537 AVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSC 596
A+A+GL+ G + + KNLR+C DCH AIK ISK+ REI +RD NR+HHF+ GLCSC
Sbjct: 568 AIAFGLISTLPGTRLLITKNLRICEDCHVAIKFISKITEREITVRDVNRYHHFRHGLCSC 627
Query: 597 RDYW 600
DYW
Sbjct: 628 GDYW 631
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 94/175 (53%), Gaps = 4/175 (2%)
Query: 232 SVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASK 291
S+L C S +L+ G+Q+HA+L + ++ +A+ L+ Y C L +FD
Sbjct: 63 SLLESCISAKALEPGKQLHARLCQLGIAYNLDLATKLVNFYSVCNSLRNAHHLFDKIPKG 122
Query: 292 DIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIF 351
++ +WN +I YA G E ++ ++H+M G+ PD+ TL VL ACS + EGR I
Sbjct: 123 NLFLWNVLIRAYAWNGPHETAISLYHQMLEYGLKPDNFTLPFVLKACSALSTIGEGRVIH 182
Query: 352 ES-MKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
E ++S + E A +VD+ + G V DA + + + + DA++W S+L A
Sbjct: 183 ERVIRSGW--ERDVFVGAALVDMYAKCGCVVDARHVFDKI-VDRDAVLWNSMLAA 234
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 86/380 (22%), Positives = 152/380 (40%), Gaps = 89/380 (23%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM-------------------------PEK 35
+P+ N+ W ++R Y G A +L+ QM E
Sbjct: 119 IPKGNLFLWNVLIRAYAWNGPHETAISLYHQMLEYGLKPDNFTLPFVLKACSALSTIGEG 178
Query: 36 NVVSWTVMLGGFIRDSRID--------------DARRLFDMMPEKDVVAQTNMVLGYCQD 81
V+ V+ G+ RD + DAR +FD + ++D V +M+ Y Q+
Sbjct: 179 RVIHERVIRSGWERDVFVGAALVDMYAKCGCVVDARHVFDKIVDRDAVLWNSMLAAYAQN 238
Query: 82 GRVDEGREIFDEMPKKNV----ISWTTMISGYVNNNRIDVARKL----FEVMPEKNEVSW 133
G DE + EM K V + T+IS + + R++ + + N+
Sbjct: 239 GHPDESLSLCCEMAAKGVRPTEATLVTVISSSADIACLPHGREIHGFGWRHGFQYNDKVK 298
Query: 134 TAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDA 193
TA++ Y +CG ++ A LF+ + K VV+ N++I G
Sbjct: 299 TALIDMYAKCGSVKVACVLFERLREKRVVSWNAIITG----------------------- 335
Query: 194 TWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQL 253
Y G +E +DLF M KE + + + + L+ C+ LD GR ++ +
Sbjct: 336 --------YAMHGLAVEALDLFERMMKEA-QPDHITFVGALAACSRGRLLDEGRALYNLM 386
Query: 254 VR-CQFDVDVYVASVLITMYIKCGELVKG-KLIFDNFASKDIVMWNSIISGYAQYG---L 308
VR C+ + V + ++ + CG+L + LI D +W ++++ +G L
Sbjct: 387 VRDCRINPTVEHYTCMVDLLGHCGQLDEAYDLIRQMDVMPDSGVWGALLNSCKTHGNVEL 446
Query: 309 GEKSLKVFHEMFSSGVMPDD 328
E +L+ E+ PDD
Sbjct: 447 AEVALEKLIEL-----EPDD 461
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 84/178 (47%), Gaps = 22/178 (12%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM---PEKNVVSWTVMLGGFIRDSRIDDAR 57
+ E+ VVSW A++ GY G+ EA LF +M + + +++ L R +D+ R
Sbjct: 321 LREKRVVSWNAIITGYAMHGLAVEALDLFERMMKEAQPDHITFVGALAACSRGRLLDEGR 380
Query: 58 RLFDMMP-----EKDVVAQTNMV--LGYCQDGRVDEGREIF---DEMPKKNVISWTTMIS 107
L+++M V T MV LG+C G++DE ++ D MP V W +++
Sbjct: 381 ALYNLMVRDCRINPTVEHYTCMVDLLGHC--GQLDEAYDLIRQMDVMPDSGV--WGALLN 436
Query: 108 GYVNNNRIDVA----RKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSV 161
+ +++A KL E+ P+ + ++ + Y Q G+ + L + M K +
Sbjct: 437 SCKTHGNVELAEVALEKLIELEPD-DSGNYVILANMYAQSGKWEGVARLRQLMIDKGI 493
>gi|449528002|ref|XP_004170996.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like, partial [Cucumis sativus]
Length = 658
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 219/619 (35%), Positives = 351/619 (56%), Gaps = 24/619 (3%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMP----EKNVVSWTVML----GGFIRDSR 52
+ E +++ W A+++GY ++ ++ ++ M N ++ +L G +
Sbjct: 45 VSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQISQVHPNCFTFLYVLKACGGTSVEGIG 104
Query: 53 IDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+ F +V Q ++V Y + G++ R +FD++ + V+SWT++ISGYV N
Sbjct: 105 KQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQN 164
Query: 113 NRIDVARKLFEVMPEKN-EVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVAS------- 164
A +F+ M + N + W A++ T ++D L + + +V
Sbjct: 165 GDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVED---LGQGKSIHGLVTKLGLEFEP 221
Query: 165 ---NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKE 221
S+ + G V+ AR F++M + + W+ MI Y GY E I LF M +
Sbjct: 222 DIVISLTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITK 281
Query: 222 GVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKG 281
+RV+ ++ S + A + SL+ R + + + ++ D +V + LI MY KCG +
Sbjct: 282 NIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLA 341
Query: 282 KLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYT 341
+ +FD A KD+V+W+ +I GY +G G++++ +++EM +GV P+D T +G+L+AC +
Sbjct: 342 RCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNS 401
Query: 342 GKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGS 401
G VKEG E+F M + +EP +HY+C+VDLLGRAG + A I +MP +P +WG+
Sbjct: 402 GLVKEGWELFHLMPD-HGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGA 460
Query: 402 LLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNV 461
LL AC+ H K+ L E+AA++L L+P N G Y+ LSN+YAS + VA +R M ++ +
Sbjct: 461 LLSACKIHRKVRLGEIAAEQLFILDPYNTGHYVQLSNLYASAHLWTRVANVRLMMTQKGL 520
Query: 462 IKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVD 521
K G S IE+ + F D SHP+ I L+++ L+ AGY P VLHD++
Sbjct: 521 NKDLGHSSIEINGNLETFQVGD-RSHPKSKEIFEELDRLEKRLKAAGYVPHMESVLHDLN 579
Query: 522 EEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILR 581
EE +L +HSE+LAVAYG++ G +R+ KNLR C +CHSAIKLISK++ REII+R
Sbjct: 580 HEEIEETLCHHSERLAVAYGIISTAPGTTLRITKNLRACINCHSAIKLISKLVDREIIIR 639
Query: 582 DANRFHHFKDGLCSCRDYW 600
DA RFHHFKDG+CSC D+W
Sbjct: 640 DAKRFHHFKDGVCSCGDFW 658
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/330 (22%), Positives = 163/330 (49%), Gaps = 10/330 (3%)
Query: 82 GRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLF------EVMPEKNEVSWTA 135
G V+ + F E+ + +++ W +I GY N +D +++ +V P +
Sbjct: 33 GDVNYAHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQISQVHPNCFTFLYVL 92
Query: 136 MLMGYTQCGRI--QDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDA 193
G T I Q + FK +V NS++ + G++ AR+VFD++ ++
Sbjct: 93 KACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYARIVFDKLHDRTVV 152
Query: 194 TWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQL 253
+W+ +I Y + G +E +++F M++ V+ ++ +L+SV++ ++ L G+ +H +
Sbjct: 153 SWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLV 212
Query: 254 VRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSL 313
+ + + + L TMY K G + + F+ ++++WN++ISGYA G GE+++
Sbjct: 213 TKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANNGYGEEAI 272
Query: 314 KVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDL 373
K+F EM + + D +T+ + A + G ++ R + + SK T ++D+
Sbjct: 273 KLFREMITKNIRVDSITMRSAVLASAQVGSLELARWL-DGYISKSEYRDDTFVNTGLIDM 331
Query: 374 LGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
+ G + A + + + + D ++W ++
Sbjct: 332 YAKCGSIYLARCVFDRVA-DKDVVLWSVMI 360
>gi|356506811|ref|XP_003522169.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 751
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 220/625 (35%), Positives = 345/625 (55%), Gaps = 34/625 (5%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
M +RN+VSWT+++ G+ EA + F QM + ++ L ++ A +
Sbjct: 136 MSQRNMVSWTSIITGFAHNSRFQEALSSFCQMRIEGEIATQFALSSVLQACTSLGAIQFG 195
Query: 61 DMMP--------EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+ ++ +N+ Y + G + + + F+EMP K+ + WT+MI G+V N
Sbjct: 196 TQVHCLVVKCGFGCELFVGSNLTDMYSKCGELSDACKAFEEMPCKDAVLWTSMIDGFVKN 255
Query: 113 NRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLG 172
A + M V+ + + C + L + KS+ A+ IL LG
Sbjct: 256 GDFKKALTAYMKM-----VTDDVFIDQHVLCSTLSACSALKASSFGKSLHAT---ILKLG 307
Query: 173 QNGEVQKARVVFDQMREKDD-ATWSGMIKVYER-----------KGY-ELEVID----LF 215
E + D + D + S + +++ GY E++ I+ F
Sbjct: 308 FEYETFIGNALTDMYSKSGDMVSASNVFQIHSDCISIVSLTAIIDGYVEMDQIEKALSTF 367
Query: 216 TLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKC 275
+++ G+ N + S++ CA+ A L+HG Q+H Q+V+ F D +V+S L+ MY KC
Sbjct: 368 VDLRRRGIEPNEFTFTSLIKACANQAKLEHGSQLHGQVVKFNFKRDPFVSSTLVDMYGKC 427
Query: 276 GELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVL 335
G +FD + D + WN+++ ++Q+GLG +++ F+ M G+ P+ VT V +L
Sbjct: 428 GLFDHSIQLFDEIENPDEIAWNTLVGVFSQHGLGRNAIETFNGMIHRGLKPNAVTFVNLL 487
Query: 336 SACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPD 395
CS+ G V++G F SM+ Y V PK EHY+C++DLLGRAG++++A I MPFEP+
Sbjct: 488 KGCSHAGMVEDGLNYFSSMEKIYGVVPKEEHYSCVIDLLGRAGKLKEAEDFINNMPFEPN 547
Query: 396 AIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKN 455
W S LGAC+ H ++ A+ AA KL++LEP+N+G ++LLSNIYA + ++ DV LRK
Sbjct: 548 VFGWCSFLGACKIHGDMERAKFAADKLMKLEPENSGAHVLLSNIYAKEKQWEDVQSLRKM 607
Query: 456 MRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSF 515
++ N+ K PG SW+++ K H+F D SHP+ I L+ + ++ GY P +
Sbjct: 608 IKDGNMNKLPGYSWVDIRNKTHVFGVED-WSHPQKKEIYEKLDNLLDQIKRIGYVPQTES 666
Query: 516 VLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMG 575
VL D+D+ K L YHSE++AVA+ L+ P G+PI V KNLRVC DCHSA+K ISKV
Sbjct: 667 VLIDMDDNLKEKLLHYHSERIAVAFSLLTCPTGMPIIVKKNLRVCSDCHSALKFISKVTE 726
Query: 576 REIILRDANRFHHFKDGLCSCRDYW 600
R II+RD +RFHHF +G CSC DYW
Sbjct: 727 RNIIVRDISRFHHFSNGSCSCGDYW 751
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 93/382 (24%), Positives = 188/382 (49%), Gaps = 19/382 (4%)
Query: 43 MLGGFIRDSRIDDARRLFDMMPEKDVVAQT---NMVLG-YCQDGRVDEGREIFDEMPKKN 98
++ + R ++ ++L M+ + T N L Y + G +D ++FD+M ++N
Sbjct: 81 LIQTYARTKELNKGKQLHAMLIRGGCLPNTFLSNHFLNLYSKCGELDYTIKLFDKMSQRN 140
Query: 99 VISWTTMISGYVNNNRIDVARKLFEVMPEKNEV----SWTAMLMGYTQCGRIQDAWELF- 153
++SWT++I+G+ +N+R A F M + E+ + +++L T G IQ ++
Sbjct: 141 MVSWTSIITGFAHNSRFQEALSSFCQMRIEGEIATQFALSSVLQACTSLGAIQFGTQVHC 200
Query: 154 ----KAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYEL 209
+ V SN + + GE+ A F++M KD W+ MI + + G
Sbjct: 201 LVVKCGFGCELFVGSNLTDM-YSKCGELSDACKAFEEMPCKDAVLWTSMIDGFVKNGDFK 259
Query: 210 EVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLI 269
+ + + M + V ++ L S LS C++L + G+ +HA +++ F+ + ++ + L
Sbjct: 260 KALTAYMKMVTDDVFIDQHVLCSTLSACSALKASSFGKSLHATILKLGFEYETFIGNALT 319
Query: 270 TMYIKCGELVKGKLIFDNFAS-KDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDD 328
MY K G++V +F + IV +II GY + EK+L F ++ G+ P++
Sbjct: 320 DMYSKSGDMVSASNVFQIHSDCISIVSLTAIIDGYVEMDQIEKALSTFVDLRRRGIEPNE 379
Query: 329 VTLVGVLSACSYTGKVKEGREIF-ESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLI 387
T ++ AC+ K++ G ++ + +K + +P + +VD+ G+ G + +++L
Sbjct: 380 FTFTSLIKACANQAKLEHGSQLHGQVVKFNFKRDPFVS--STLVDMYGKCGLFDHSIQLF 437
Query: 388 EAMPFEPDAIIWGSLLGACRTH 409
+ + PD I W +L+G H
Sbjct: 438 DEIE-NPDEIAWNTLVGVFSQH 458
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 142/318 (44%), Gaps = 8/318 (2%)
Query: 152 LFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEV 211
L + + + SN + + GE+ +FD+M +++ +W+ +I + E
Sbjct: 101 LIRGGCLPNTFLSNHFLNLYSKCGELDYTIKLFDKMSQRNMVSWTSIITGFAHNSRFQEA 160
Query: 212 IDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITM 271
+ F M+ EG +L SVL C SL ++ G QVH +V+C F +++V S L M
Sbjct: 161 LSSFCQMRIEGEIATQFALSSVLQACTSLGAIQFGTQVHCLVVKCGFGCELFVGSNLTDM 220
Query: 272 YIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTL 331
Y KCGEL F+ KD V+W S+I G+ + G +K+L + +M + V D L
Sbjct: 221 YSKCGELSDACKAFEEMPCKDAVLWTSMIDGFVKNGDFKKALTAYMKMVTDDVFIDQHVL 280
Query: 332 VGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMP 391
LSACS G+ + ++ K E +T + D+ ++G + A + +
Sbjct: 281 CSTLSACSALKASSFGKSLHATIL-KLGFEYETFIGNALTDMYSKSGDMVSASNVFQ--- 336
Query: 392 FEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGP----YILLSNIYASQGRFH 447
D I SL ++++D E A + L + P + L A+Q +
Sbjct: 337 IHSDCISIVSLTAIIDGYVEMDQIEKALSTFVDLRRRGIEPNEFTFTSLIKACANQAKLE 396
Query: 448 DVAELRKNMRKRNVIKPP 465
++L + K N + P
Sbjct: 397 HGSQLHGQVVKFNFKRDP 414
>gi|357504267|ref|XP_003622422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355497437|gb|AES78640.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 952
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 223/651 (34%), Positives = 352/651 (54%), Gaps = 52/651 (7%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM------PEKNVVSWTVMLGGFIRDSRID 54
MP RNV++W ++ YV G + +F +M P+ +S + ++D +
Sbjct: 303 MPHRNVITWNSLASCYVNCGFPQKGLNVFREMGLNGVKPDPMAMSSILPACSQLKDLKSG 362
Query: 55 DARRLFDMMPE--KDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVN- 111
F + +DV T +V Y V E + +FD MP +NV++W ++ S YVN
Sbjct: 363 KTIHGFAVKHGMVEDVFVCTALVNLYANCLCVREAQTVFDLMPHRNVVTWNSLSSCYVNC 422
Query: 112 ---NNRIDVARK--LFEVMPE---------------------------------KNEVSW 133
++V R+ L V P+ ++
Sbjct: 423 GFPQKGLNVFREMVLNGVKPDLVTMLSILHACSDLQDLKSGKVIHGFAVRHGMVEDVFVC 482
Query: 134 TAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMR----E 189
A+L Y +C +++A +F +P + V + N ++ N E +K +F QM +
Sbjct: 483 NALLSLYAKCVCVREAQVVFDLIPHREVASWNGILTAYFTNKEYEKGLYMFSQMNRDEVK 542
Query: 190 KDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQV 249
D+ TWS +I + E +++F MQ G + + ++ S+L C+ L G+++
Sbjct: 543 ADEITWSVVIGGCVKNSRIEEAMEIFRKMQTMGFKPDETTIYSILRACSLSECLRMGKEI 602
Query: 250 HAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLG 309
H + R D D+ + L+ MY KCG L + +FD KD+ WN++I +G G
Sbjct: 603 HCYVFRHWKDWDLARTNALVDMYAKCGGLSLSRNVFDMMPIKDVFSWNTMIFANGMHGNG 662
Query: 310 EKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYAC 369
+++L +F +M S V PD T VLSACS++ V+EG +IF SM +LVEP+ EHY C
Sbjct: 663 KEALSLFEKMLLSMVKPDSATFTCVLSACSHSMLVEEGVQIFNSMSRDHLVEPEAEHYTC 722
Query: 370 MVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKN 429
+VD+ RAG +E+A I+ MP EP AI W + L CR + ++LA+++AKKL +++P
Sbjct: 723 VVDIYSRAGCLEEAYGFIQRMPMEPTAIAWKAFLAGCRVYKNVELAKISAKKLFEIDPNG 782
Query: 430 AGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPE 489
+ Y+ L NI + + + +++RK M++R + K PGCSW V +VH F D S+ E
Sbjct: 783 SANYVTLFNILVTAKLWSEASKIRKLMKERGITKTPGCSWFHVGNRVHTFVAGD-KSNME 841
Query: 490 HPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGV 549
I L+++ ++ AGY PD+ +VLHD+D+EEK SL HSEKLAVA+G++ L
Sbjct: 842 SDKIYNFLDELFAKIKAAGYKPDTDYVLHDIDQEEKAESLCNHSEKLAVAFGILNLNGQS 901
Query: 550 PIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
IRV KNLR+CGDCH+AIK +S V+G I++RD+ RFHHFK+G CSC+D+W
Sbjct: 902 TIRVFKNLRICGDCHNAIKYMSNVVGVTIVVRDSLRFHHFKNGNCSCKDFW 952
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 106/424 (25%), Positives = 203/424 (47%), Gaps = 30/424 (7%)
Query: 4 RNVVSWTAMVRGYVEEGMITEAGTLFWQMP----EKNVVSWTVMLGGFIRDSRIDDARRL 59
R+VV+W ++ YV G + +F +M + N ++ + +L G + + +
Sbjct: 104 RDVVTWNSLSACYVNCGFPQQGLNVFRKMGLNKVKANPLTVSSILPGCSDLQDLKSGKEI 163
Query: 60 FDMMPE----KDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVN---- 111
+ +DV + V Y + V E + +FD MP ++V++W ++ S YVN
Sbjct: 164 HGFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQTVFDLMPHRDVVTWNSLSSCYVNCGFP 223
Query: 112 NNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQD--------AWELFKAMPMKSVVA 163
++V R++ + + V+ + +L + C +QD + L M +++V
Sbjct: 224 QKGLNVFREMVLDGVKPDPVTVSCIL---SACSDLQDLKSGKAIHGFALKHGM-VENVFV 279
Query: 164 SNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGV 223
SN+++ V++A+ VFD M ++ TW+ + Y G+ + +++F M GV
Sbjct: 280 SNALVNLYESCLCVREAQAVFDLMPHRNVITWNSLASCYVNCGFPQKGLNVFREMGLNGV 339
Query: 224 RVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKL 283
+ + ++ S+L C+ L L G+ +H V+ DV+V + L+ +Y C + + +
Sbjct: 340 KPDPMAMSSILPACSQLKDLKSGKTIHGFAVKHGMVEDVFVCTALVNLYANCLCVREAQT 399
Query: 284 IFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGK 343
+FD +++V WNS+ S Y G +K L VF EM +GV PD VT++ +L ACS
Sbjct: 400 VFDLMPHRNVVTWNSLSSCYVNCGFPQKGLNVFREMVLNGVKPDLVTMLSILHACSDLQD 459
Query: 344 VKEGREIFESMKSKYLVEPKTEHYAC--MVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGS 401
+K G+ I +VE + + C ++ L + V +A + + +P + W
Sbjct: 460 LKSGKVIHGFAVRHGMVE---DVFVCNALLSLYAKCVCVREAQVVFDLIPHR-EVASWNG 515
Query: 402 LLGA 405
+L A
Sbjct: 516 ILTA 519
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 96/403 (23%), Positives = 192/403 (47%), Gaps = 23/403 (5%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM------PEKNVVSWTVMLGGFIRDSRID 54
MP R+VV+W ++ YV G + +F +M P+ VS + ++D +
Sbjct: 202 MPHRDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSACSDLQDLKSG 261
Query: 55 DARRLFDMMPE--KDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVN- 111
A F + ++V +V Y V E + +FD MP +NVI+W ++ S YVN
Sbjct: 262 KAIHGFALKHGMVENVFVSNALVNLYESCLCVREAQAVFDLMPHRNVITWNSLASCYVNC 321
Query: 112 ---NNRIDVARKLFEVMPEKNEVSWTAMLMGYTQ-----CGRIQDAWELFKAMPMKSVVA 163
++V R++ + + ++ +++L +Q G+ + + M ++ V
Sbjct: 322 GFPQKGLNVFREMGLNGVKPDPMAMSSILPACSQLKDLKSGKTIHGFAVKHGM-VEDVFV 380
Query: 164 SNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGV 223
+++ V++A+ VFD M ++ TW+ + Y G+ + +++F M GV
Sbjct: 381 CTALVNLYANCLCVREAQTVFDLMPHRNVVTWNSLSSCYVNCGFPQKGLNVFREMVLNGV 440
Query: 224 RVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKL 283
+ + +++S+L C+ L L G+ +H VR DV+V + L+++Y KC + + ++
Sbjct: 441 KPDLVTMLSILHACSDLQDLKSGKVIHGFAVRHGMVEDVFVCNALLSLYAKCVCVREAQV 500
Query: 284 IFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGK 343
+FD +++ WN I++ Y EK L +F +M V D++T V+ C +
Sbjct: 501 VFDLIPHREVASWNGILTAYFTNKEYEKGLYMFSQMNRDEVKADEITWSVVIGGCVKNSR 560
Query: 344 VKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKL 386
++E EIF M++ +T Y+ + RA + + +++
Sbjct: 561 IEEAMEIFRKMQTMGFKPDETTIYSIL-----RACSLSECLRM 598
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 90/359 (25%), Positives = 177/359 (49%), Gaps = 17/359 (4%)
Query: 54 DDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVN-- 111
DDA R M DV + Y + V+ R +FD++ ++V++W ++ + YVN
Sbjct: 64 DDATRCGVM---SDVSIGNAFIHAYGKCKCVEGARRVFDDLVARDVVTWNSLSACYVNCG 120
Query: 112 --NNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWEL----FKAMPMKSVVASN 165
++V RK+ + N ++ +++L G + ++ E+ + ++ V S+
Sbjct: 121 FPQQGLNVFRKMGLNKVKANPLTVSSILPGCSDLQDLKSGKEIHGFVVRHGMVEDVFVSS 180
Query: 166 SMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRV 225
+ + + V++A+ VFD M +D TW+ + Y G+ + +++F M +GV+
Sbjct: 181 AFVNFYAKCLCVREAQTVFDLMPHRDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKP 240
Query: 226 NFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIF 285
+ ++ +LS C+ L L G+ +H ++ +V+V++ L+ +Y C + + + +F
Sbjct: 241 DPVTVSCILSACSDLQDLKSGKAIHGFALKHGMVENVFVSNALVNLYESCLCVREAQAVF 300
Query: 286 DNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVK 345
D ++++ WNS+ S Y G +K L VF EM +GV PD + + +L ACS +K
Sbjct: 301 DLMPHRNVITWNSLASCYVNCGFPQKGLNVFREMGLNGVKPDPMAMSSILPACSQLKDLK 360
Query: 346 EGREIFESMKSKYLVEPKTEHYAC--MVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSL 402
G+ I +VE + + C +V+L V +A + + MP + + W SL
Sbjct: 361 SGKTIHGFAVKHGMVE---DVFVCTALVNLYANCLCVREAQTVFDLMPHR-NVVTWNSL 415
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 92/197 (46%), Gaps = 2/197 (1%)
Query: 206 GYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVA 265
G E I ++T + G++ + P ++V CA+ +Q H RC DV +
Sbjct: 19 GLPNEAIKIYTSSRARGIKPDKPVFMAVAKACAASRDALKVKQFHDDATRCGVMSDVSIG 78
Query: 266 SVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVM 325
+ I Y KC + + +FD+ ++D+V WNS+ + Y G ++ L VF +M + V
Sbjct: 79 NAFIHAYGKCKCVEGARRVFDDLVARDVVTWNSLSACYVNCGFPQQGLNVFRKMGLNKVK 138
Query: 326 PDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMK 385
+ +T+ +L CS +K G+EI + +VE A V+ + V +A
Sbjct: 139 ANPLTVSSILPGCSDLQDLKSGKEIHGFVVRHGMVEDVFVSSA-FVNFYAKCLCVREAQT 197
Query: 386 LIEAMPFEPDAIIWGSL 402
+ + MP D + W SL
Sbjct: 198 VFDLMPHR-DVVTWNSL 213
>gi|356536721|ref|XP_003536884.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g62890-like [Glycine max]
Length = 1116
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 206/470 (43%), Positives = 294/470 (62%), Gaps = 5/470 (1%)
Query: 134 TAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDA 193
T+++ Y+ CG A + F + + + N++I + G + AR +FDQM EK+
Sbjct: 99 TSLINMYSSCGTPTFARQAFDEITQPDLPSWNAIIHANAKAGMIHIARKLFDQMPEKNVI 158
Query: 194 TWSGMIKVYERKGYELEVIDLFTLMQK-EG--VRVNFPSLISVLSVCASLASLDHGRQVH 250
+WS MI Y G + LF +Q EG +R N ++ SVLS CA L +L HG+ VH
Sbjct: 159 SWSCMIHGYVSCGEYKAALSLFRSLQTLEGSQLRPNEFTMSSVLSACARLGALQHGKWVH 218
Query: 251 AQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFAS-KDIVMWNSIISGYAQYGLG 309
A + + +DV + + LI MY KCG + + K IFDN KD++ W+++I+ ++ +GL
Sbjct: 219 AYIDKTGMKIDVVLGTSLIDMYAKCGSIERAKCIFDNLGPEKDVMAWSAMITAFSMHGLS 278
Query: 310 EKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYAC 369
E+ L++F M + GV P+ VT V VL AC + G V EG E F+ M ++Y V P +HY C
Sbjct: 279 EECLELFARMVNDGVRPNAVTFVAVLCACVHGGLVSEGNEYFKRMMNEYGVSPMIQHYGC 338
Query: 370 MVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKN 429
MVDL RAG++EDA ++++MP EPD +IWG+LL R H ++ E+A KLL+L+P N
Sbjct: 339 MVDLYSRAGRIEDAWNVVKSMPMEPDVMIWGALLNGARIHGDVETCEIAITKLLELDPAN 398
Query: 430 AGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPE 489
+ Y+LLSN+YA GR+ +V LR M R + K PGCS +EV+ + F D SHPE
Sbjct: 399 SSAYVLLSNVYAKLGRWREVRHLRDLMEVRGIKKLPGCSLVEVDGVIREFFAGDN-SHPE 457
Query: 490 HPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGV 549
+ ML++I L + GY ++ VL D+DEE K +L HSEKLA+AY ++ G
Sbjct: 458 LLNLYVMLDEIMKRLEKHGYERNTGEVLLDLDEEGKEFALSLHSEKLAIAYCFLRTSPGT 517
Query: 550 PIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDY 599
IR++KNLR+C DCH AIK+ISK REII+RD NRFHHFK+GLCSC+DY
Sbjct: 518 TIRIVKNLRICSDCHVAIKIISKEFNREIIVRDCNRFHHFKNGLCSCKDY 567
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 128/288 (44%), Gaps = 47/288 (16%)
Query: 66 KDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVM 125
D QT+++ Y G R+ FDE+ + ++ SW +I I +ARKLF+ M
Sbjct: 93 NDPFVQTSLINMYSSCGTPTFARQAFDEITQPDLPSWNAIIHANAKAGMIHIARKLFDQM 152
Query: 126 PEKNEVSWTAMLMGYTQCGRIQDAWELFKAM-------------PMKSVVAS-------- 164
PEKN +SW+ M+ GY CG + A LF+++ M SV+++
Sbjct: 153 PEKNVISWSCMIHGYVSCGEYKAALSLFRSLQTLEGSQLRPNEFTMSSVLSACARLGALQ 212
Query: 165 ---------------------NSMILGLGQNGEVQKARVVFDQM-REKDDATWSGMIKVY 202
S+I + G +++A+ +FD + EKD WS MI +
Sbjct: 213 HGKWVHAYIDKTGMKIDVVLGTSLIDMYAKCGSIERAKCIFDNLGPEKDVMAWSAMITAF 272
Query: 203 ERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDV 262
G E ++LF M +GVR N + ++VL C + G + +++ ++ V
Sbjct: 273 SMHGLSEECLELFARMVNDGVRPNAVTFVAVLCACVHGGLVSEGNEYFKRMMN-EYGVSP 331
Query: 263 YVA--SVLITMYIKCGELVKGKLIFDNFA-SKDIVMWNSIISGYAQYG 307
+ ++ +Y + G + + + D+++W ++++G +G
Sbjct: 332 MIQHYGCMVDLYSRAGRIEDAWNVVKSMPMEPDVMIWGALLNGARIHG 379
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 130/311 (41%), Gaps = 87/311 (27%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
+ + ++ SW A++ + GMI A LF QMPEKNV+SW+ M+ G++ A LF
Sbjct: 121 ITQPDLPSWNAIIHANAKAGMIHIARKLFDQMPEKNVISWSCMIHGYVSCGEYKAALSLF 180
Query: 61 ---------DMMPEK---------------------------------DVVAQTNMVLGY 78
+ P + DVV T+++ Y
Sbjct: 181 RSLQTLEGSQLRPNEFTMSSVLSACARLGALQHGKWVHAYIDKTGMKIDVVLGTSLIDMY 240
Query: 79 CQDGRVDEGREIFDEM-PKKNVISWTTMISGYVNNNRIDVARKLFEVMPE----KNEVSW 133
+ G ++ + IFD + P+K+V++W+ MI+ + + + +LF M N V++
Sbjct: 241 AKCGSIERAKCIFDNLGPEKDVMAWSAMITAFSMHGLSEECLELFARMVNDGVRPNAVTF 300
Query: 134 TAMLMG------------------------------------YTQCGRIQDAWELFKAMP 157
A+L Y++ GRI+DAW + K+MP
Sbjct: 301 VAVLCACVHGGLVSEGNEYFKRMMNEYGVSPMIQHYGCMVDLYSRAGRIEDAWNVVKSMP 360
Query: 158 MK-SVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMI---KVYERKGYELEVID 213
M+ V+ +++ G +G+V+ + ++ E D A S + VY + G EV
Sbjct: 361 MEPDVMIWGALLNGARIHGDVETCEIAITKLLELDPANSSAYVLLSNVYAKLGRWREVRH 420
Query: 214 LFTLMQKEGVR 224
L LM+ G++
Sbjct: 421 LRDLMEVRGIK 431
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/253 (21%), Positives = 103/253 (40%), Gaps = 42/253 (16%)
Query: 195 WSGMIKVYERKGYE----LEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVH 250
W+ +I+ R + + L+ M+ V P L + + S+ + GRQ+H
Sbjct: 27 WNNLIRASTRSRVQNPAFPPALSLYLRMRLHAV---LPDLHTFPFLLQSINTPHRGRQLH 83
Query: 251 AQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGE 310
AQ++ D +V + LI MY CG + FD D+ WN+II A+ G+
Sbjct: 84 AQILLLGLANDPFVQTSLINMYSSCGTPTFARQAFDEITQPDLPSWNAIIHANAKAGMIH 143
Query: 311 KSLKVFHEMFSSGVM----------------------------------PDDVTLVGVLS 336
+ K+F +M V+ P++ T+ VLS
Sbjct: 144 IARKLFDQMPEKNVISWSCMIHGYVSCGEYKAALSLFRSLQTLEGSQLRPNEFTMSSVLS 203
Query: 337 ACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDA 396
AC+ G ++ G+ + + K ++ ++D+ + G +E A + + + E D
Sbjct: 204 ACARLGALQHGKWV-HAYIDKTGMKIDVVLGTSLIDMYAKCGSIERAKCIFDNLGPEKDV 262
Query: 397 IIWGSLLGACRTH 409
+ W +++ A H
Sbjct: 263 MAWSAMITAFSMH 275
>gi|222622350|gb|EEE56482.1| hypothetical protein OsJ_05706 [Oryza sativa Japonica Group]
Length = 799
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 215/614 (35%), Positives = 353/614 (57%), Gaps = 21/614 (3%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
+P +++ Y+ G+ +A F ++ K+ V+WT+++ G + + D + L
Sbjct: 137 LPSAAPFVSNSLIHMYIRLGLAADARRAFDEIHVKDAVAWTMLISGLAKMGMLCDTQLLL 196
Query: 61 DMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNV----ISWTTMISGYVNNNRID 116
P +DV++ T+++ Y + R E F M + ++ ++S ++
Sbjct: 197 SQAPVRDVISWTSLIAAYSRANRAREAVGCFKTMLSHGIAPDEVTVIAVLSACAKLKDLE 256
Query: 117 VARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVAS-NSMILGL 171
+ R L ++ EK +E A++ Y +CG A ++F A+ S N++I G
Sbjct: 257 LGRSLHLLVEEKGMPTSENLVVALIDMYAKCGDFGHAQQVFDALGRGPRPQSWNAIIDGY 316
Query: 172 GQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLI 231
++G V AR +FD+M +D T++ M+ Y G E + LF M++ +RV+ +++
Sbjct: 317 CKHGHVDVARSLFDEMEVRDIITFNSMMTGYIHSGQLREALLLFMSMRRHDLRVDNFTVV 376
Query: 232 SVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASK 291
++L+ CASL +L GR +HA + + + D+Y+ + L+ MY+KCG + + ++F +
Sbjct: 377 NLLTACASLGALQQGRALHACIEQRLVEADIYLGTALLDMYMKCGRVDEATIVFQRMGKR 436
Query: 292 DIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIF 351
D+ W ++I+G A G+G+ +L+ F++M G P+ V+ + VL+ACS++ + EGR F
Sbjct: 437 DVHTWTAMIAGLAFNGMGKAALEHFYQMRCDGFQPNSVSYIAVLTACSHSCLLNEGRLYF 496
Query: 352 ESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMK 411
+ M+ Y + P+ EHY CM+DLLGR+G +++AM L++ MP +P+A+IW S+L ACR H
Sbjct: 497 DEMRILYNIHPQIEHYGCMIDLLGRSGLLDEAMDLVKTMPIQPNAVIWASILSACRVHKH 556
Query: 412 LDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIE 471
+DLA+ AA+ LL+LEP G Y+ L NIY ++ + +++R M +R V K G S I
Sbjct: 557 IDLAQCAAEHLLKLEPDEDGVYVQLYNIYIDSRQWENASKIRMLMEERQVKKTAGYSSIT 616
Query: 472 VEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRY 531
V +VH F D SHP I+ MLE+I L+ GY P +S + DVDEEEK +L
Sbjct: 617 VAGQVHKFVVSD-KSHPRILEIIAMLEEISHRLKSLGYSPLTSQITVDVDEEEKEQALLA 675
Query: 532 HSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRF--HH- 588
HSEKLA+A+GL+ L +P+ + KNLRVC DCHSAIKLIS++ REII+RD + HH
Sbjct: 676 HSEKLAIAFGLINLAPNLPVHIRKNLRVCEDCHSAIKLISRLWNREIIVRDRSSCVEHHN 735
Query: 589 --------FKDGLC 594
DGLC
Sbjct: 736 ALRSSSRLVVDGLC 749
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 119/284 (41%), Gaps = 41/284 (14%)
Query: 214 LFTLMQKEGVR---VNFPSLISVLSVCASLASLDHGRQVHAQLVRCQF-DVDVYVASVLI 269
LF M++ GVR F L S + SL +HA +R +V++ LI
Sbjct: 90 LFRRMRRAGVRPDGFTFHFLFKCSSSSSRPHSLLLCTMLHAACLRTMLPSAAPFVSNSLI 149
Query: 270 TMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGL--------------------- 308
MYI+ G + FD KD V W +ISG A+ G+
Sbjct: 150 HMYIRLGLAADARRAFDEIHVKDAVAWTMLISGLAKMGMLCDTQLLLSQAPVRDVISWTS 209
Query: 309 ----------GEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKY 358
+++ F M S G+ PD+VT++ VLSAC+ ++ GR + ++ K
Sbjct: 210 LIAAYSRANRAREAVGCFKTMLSHGIAPDEVTVIAVLSACAKLKDLELGRSLHLLVEEKG 269
Query: 359 LVEPKTEHY-ACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEV 417
+ P +E+ ++D+ + G A ++ +A+ P W +++ H +D V
Sbjct: 270 M--PTSENLVVALIDMYAKCGDFGHAQQVFDALGRGPRPQSWNAIIDGYCKHGHVD---V 324
Query: 418 AAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNV 461
A ++E ++ + + Y G+ + L +MR+ ++
Sbjct: 325 ARSLFDEMEVRDIITFNSMMTGYIHSGQLREALLLFMSMRRHDL 368
>gi|357438957|ref|XP_003589755.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478803|gb|AES60006.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 891
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 192/499 (38%), Positives = 309/499 (61%), Gaps = 4/499 (0%)
Query: 2 PERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFD 61
+++V+ WTAMV GY++ I EA LF +MP +NVVSW M+ G+ R+ R +A LF
Sbjct: 104 AQKSVIVWTAMVSGYIKMNRIEEAERLFNEMPVRNVVSWNTMIDGYARNGRTQEALDLFG 163
Query: 62 MMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKL 121
MPE++VV+ ++ GR+D+ +F+EM +++V+SWTTM++G N R+D AR++
Sbjct: 164 RMPERNVVSWNTVMTALAHCGRIDDAERLFNEMRERDVVSWTTMVAGLSKNGRVDAAREV 223
Query: 122 FEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKAR 181
F+ MP +N VSW AM+ GY Q GR +A +LF+ MP + + + N+M+ G QNG++ +A
Sbjct: 224 FDKMPIRNVVSWNAMIAGYAQNGRFDEALKLFERMPERDMPSWNTMVTGFIQNGDLNRAE 283
Query: 182 VVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQ-KEGVRVNFPSLISVLSVCASL 240
+F M +K+ TW+ M+ Y + G E + LF MQ +G++ + ++VL C+ L
Sbjct: 284 QLFHAMPQKNVITWTAMMTGYVQHGLSEEALKLFNKMQANDGLKPTTGTFVTVLGACSDL 343
Query: 241 ASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASK--DIVMWNS 298
A L G+Q+H + + F YV S LI MY KCG+ K +FD+ S D++ WN
Sbjct: 344 AGLPEGQQIHQMISKTVFQESTYVVSALINMYSKCGDFHVAKKMFDDGLSGHMDLIAWNG 403
Query: 299 IISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKY 358
+I+ YA +G G +++ +F++M G +DVT VG+L+ACS+ G EG + F+ +
Sbjct: 404 MIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVGLLTACSHAGLFDEGFKYFDELLKNR 463
Query: 359 LVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVA 418
++ + +HY C++DL GRAG++++A+ +IE + E +WG+LL C H D+ ++
Sbjct: 464 YIQVREDHYTCLIDLCGRAGRLDEALNIIEGLGKEVSLSLWGALLAGCSVHGNADIGKLV 523
Query: 419 AKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHM 478
A K+L++EP+NA Y+L SN+YAS G + A +R M+K+ + K PGCSWI+V V +
Sbjct: 524 ADKVLKMEPENADTYLLASNMYASVGMREEAANVRMKMKKKGLKKQPGCSWIDVGNTVQV 583
Query: 479 FTGRDCVSHPEHPMIMRML 497
F D SH + M+ +L
Sbjct: 584 FVVND-KSHSQFEMLKYLL 601
Score = 218 bits (555), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 126/394 (31%), Positives = 206/394 (52%), Gaps = 43/394 (10%)
Query: 19 EGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMM-PEKDVVAQTNMVLG 77
EG + EA +F +M +++ WT M+ G+I+ I++AR+LFD +K V+ T MV G
Sbjct: 58 EGKVNEARKVFDEMSKRDSCLWTTMISGYIKCGLINEARKLFDRPDAQKSVIVWTAMVSG 117
Query: 78 YCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAML 137
Y + R++E +F+EMP +NV+SW TMI GY N R A LF MPE+N VSW ++
Sbjct: 118 YIKMNRIEEAERLFNEMPVRNVVSWNTMIDGYARNGRTQEALDLFGRMPERNVVSWNTVM 177
Query: 138 MGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSG 197
CGRI DA LF M + VV+ +M+ GL +NG V AR VFD+M ++ +W+
Sbjct: 178 TALAHCGRIDDAERLFNEMRERDVVSWTTMVAGLSKNGRVDAAREVFDKMPIRNVVSWNA 237
Query: 198 MIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQ 257
MI Y + G E + LF M + + PS
Sbjct: 238 MIAGYAQNGRFDEALKLFERMPER----DMPSW--------------------------- 266
Query: 258 FDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFH 317
+ ++T +I+ G+L + + +F K+++ W ++++GY Q+GL E++LK+F+
Sbjct: 267 --------NTMVTGFIQNGDLNRAEQLFHAMPQKNVITWTAMMTGYVQHGLSEEALKLFN 318
Query: 318 EMFSS-GVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGR 376
+M ++ G+ P T V VL ACS + EG++I + M SK + + T + ++++ +
Sbjct: 319 KMQANDGLKPTTGTFVTVLGACSDLAGLPEGQQIHQ-MISKTVFQESTYVVSALINMYSK 377
Query: 377 AGQVEDAMKLI-EAMPFEPDAIIWGSLLGACRTH 409
G A K+ + + D I W ++ A H
Sbjct: 378 CGDFHVAKKMFDDGLSGHMDLIAWNGMIAAYAHH 411
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 90/354 (25%), Positives = 176/354 (49%), Gaps = 33/354 (9%)
Query: 105 MISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELF-KAMPMKSVVA 163
IS +++ ARK+F+ M +++ WT M+ GY +CG I +A +LF + KSV+
Sbjct: 51 FISKLCREGKVNEARKVFDEMSKRDSCLWTTMISGYIKCGLINEARKLFDRPDAQKSVIV 110
Query: 164 SNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGV 223
+M+ G + +++A +F++M ++ +W+ MI Y R G E +DLF M + V
Sbjct: 111 WTAMVSGYIKMNRIEEAERLFNEMPVRNVVSWNTMIDGYARNGRTQEALDLFGRMPERNV 170
Query: 224 RVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKL 283
V++ ++++ L+ C +D ++ ++ + DV + ++ K G + +
Sbjct: 171 -VSWNTVMTALAHC---GRIDDAERLFNEMR----ERDVVSWTTMVAGLSKNGRVDAARE 222
Query: 284 IFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGK 343
+FD +++V WN++I+GYAQ G +++LK+F M + + + G + G
Sbjct: 223 VFDKMPIRNVVSWNAMIAGYAQNGRFDEALKLFERMPERDMPSWNTMVTGFIQ----NGD 278
Query: 344 VKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMP----FEPDAIIW 399
+ ++F +M K ++ + M+ + G E+A+KL M +P +
Sbjct: 279 LNRAEQLFHAMPQKNVIT-----WTAMMTGYVQHGLSEEALKLFNKMQANDGLKPTTGTF 333
Query: 400 GSLLGACRTHMKLDLAEVA-AKKLLQLEPKNA---GPYIL--LSNIYASQGRFH 447
++LGAC DLA + +++ Q+ K Y++ L N+Y+ G FH
Sbjct: 334 VTVLGACS-----DLAGLPEGQQIHQMISKTVFQESTYVVSALINMYSKCGDFH 382
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/347 (23%), Positives = 154/347 (44%), Gaps = 31/347 (8%)
Query: 165 NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVR 224
N I L + G+V +AR VFD+M ++D W+ MI Y + G E LF +
Sbjct: 49 NYFISKLCREGKVNEARKVFDEMSKRDSCLWTTMISGYIKCGLINEARKLFDRPDAQKSV 108
Query: 225 VNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDV-DVYVASVLITMYIKCGELVKGKL 283
+ + +++S + R A+ + + V +V + +I Y + G +
Sbjct: 109 IVWTAMVS--------GYIKMNRIEEAERLFNEMPVRNVVSWNTMIDGYARNGRTQEALD 160
Query: 284 IFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGK 343
+F +++V WN++++ A G + + ++F+EM V V+ +++ S G+
Sbjct: 161 LFGRMPERNVVSWNTVMTALAHCGRIDDAERLFNEMRERDV----VSWTTMVAGLSKNGR 216
Query: 344 VKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
V RE+F+ M + +V + M+ + G+ ++A+KL E MP E D W +++
Sbjct: 217 VDAAREVFDKMPIRNVVS-----WNAMIAGYAQNGRFDEALKLFERMP-ERDMPSWNTMV 270
Query: 404 GACRTHMKLDLAEVAAKKLLQLEP-KNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVI 462
+ L+ AE +L P KN + + Y G + +L M+ + +
Sbjct: 271 TGFIQNGDLNRAE----QLFHAMPQKNVITWTAMMTGYVQHGLSEEALKLFNKMQANDGL 326
Query: 463 KPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGY 509
KP +++ V + D PE I +M+ K + +E+ Y
Sbjct: 327 KPTTGTFVTV-----LGACSDLAGLPEGQQIHQMISKT--VFQESTY 366
>gi|357457743|ref|XP_003599152.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355488200|gb|AES69403.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1125
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 211/615 (34%), Positives = 341/615 (55%), Gaps = 17/615 (2%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEK----NVVSWTVMLGGFIRDSRIDDA 56
MP R+++SW +M+ +VE+G + A L +M + N V++T L ++
Sbjct: 513 MPARDLISWNSMMASHVEDGKYSHAILLLVEMLKTRKAMNYVTFTTALSACYNLEKLKIV 572
Query: 57 RRL-FDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRI 115
+++ +V Y + G +DE +++ MP+++V++W +I G+ ++
Sbjct: 573 HAFVIHFAVHHNLIIGNTLVTMYGKFGLMDEAQKVCKIMPERDVVTWNALIGGHADDKDP 632
Query: 116 DVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKS--VVA--------SN 165
+ + F +M + +S ++ D + L MP+ + VVA +
Sbjct: 633 NATIQAFNLMRREGLLSNYITIVNLLGTCMSPD-YLLKHGMPIHAHIVVAGFELDTYVQS 691
Query: 166 SMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRV 225
S+I Q G++ + +FD + K+ +TW+ + G E + M+ +GV +
Sbjct: 692 SLITMYAQCGDLNTSSYIFDVLANKNSSTWNAIFSANAHYGPGEEALKFIARMRNDGVDL 751
Query: 226 NFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIF 285
+ S L+ +L LD G+Q+H+ +++ F++D YV + + MY KCGE+ I
Sbjct: 752 DQFSFSVALATIGNLTVLDEGQQLHSWIIKLGFELDEYVLNATMDMYGKCGEIDDVFRIL 811
Query: 286 DNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVK 345
+ WN +IS A++G ++ + FHEM G+ PD VT V +LSACS+ G V
Sbjct: 812 PIPKIRSKRSWNILISALARHGFFRQATEAFHEMLDLGLKPDHVTFVSLLSACSHGGLVD 871
Query: 346 EGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
EG F SM S++ V EH C++DLLGR+G++ +A I+ MP P+ +W SLL A
Sbjct: 872 EGLVYFSSMTSEFGVPTAIEHCVCIIDLLGRSGRLAEAEGFIDKMPVPPNEFVWRSLLAA 931
Query: 406 CRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPP 465
C+ H L+L AA +L +L + Y+L SN+ AS R+ DV +RK M +++ K P
Sbjct: 932 CKVHGNLELGRKAADRLFELNSSDDSAYVLYSNVCASTQRWGDVENVRKQMESQSLKKKP 991
Query: 466 GCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEK 525
CSWI+++ KV F D HP+ I LE++ + RE G+ PD+S+ L D DEE+K
Sbjct: 992 ACSWIKLKNKVMTFGMGDQF-HPQSAQIYAKLEELRKMTREEGHMPDTSYALQDTDEEQK 1050
Query: 526 VHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANR 585
H+L HSE++A+A+GL+ EG P+R+ KNLRVCGDCHS KL+SK++GR+I++RD+ R
Sbjct: 1051 EHNLWNHSERIALAFGLINSAEGSPLRIFKNLRVCGDCHSVFKLVSKIVGRKIVVRDSYR 1110
Query: 586 FHHFKDGLCSCRDYW 600
FHHF G CSC DYW
Sbjct: 1111 FHHFHGGKCSCSDYW 1125
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 108/452 (23%), Positives = 200/452 (44%), Gaps = 54/452 (11%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDM 62
++N +V Y + G I A +F +M ++N SW M+ GF+R A + F
Sbjct: 179 QQNTFYTNTLVNMYSKFGSIKYAQHVFDKMYDRNDASWNNMISGFVRVGWYHKAMQFFCH 238
Query: 63 MPEKDVVAQT----NMVLGYCQDGRVDEG-REIFDEMPK----KNVISWTTMISGYVNNN 113
M E V + +MV + G + EG R+I + K NV T+++ Y +
Sbjct: 239 MFENGVTPSSYVIASMVTACDRSGCMTEGARQIHGYVVKCGLMSNVFVGTSLLHFYGTHG 298
Query: 114 RIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFK------------------- 154
+ A KLFE + E N VSWT++++ Y G ++ +++
Sbjct: 299 SVSEANKLFEEIEEPNIVSWTSLMVCYADNGHTKEVLNIYRHLRHNGLICTGNTMATVIR 358
Query: 155 ---------------------AMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDA 193
+ SV +NS+I G V++A VF+ M+E+D
Sbjct: 359 TCGMFGDKTMGYQILGDVIKSGLDTSSVSVANSLISMFGNYDSVEEASRVFNNMQERDTI 418
Query: 194 TWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQL 253
+W+ +I G E + F M++ + ++ ++ ++L C S L GR +H +
Sbjct: 419 SWNSIITASAHNGRFEESLGHFFWMRRTHPKTDYITISALLPACGSAQHLKWGRGLHGLI 478
Query: 254 VRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSL 313
+ + +V V + L++MY + G +L+F ++D++ WNS+++ + + G ++
Sbjct: 479 TKSGLESNVCVCNSLLSMYAQAGSSEDAELVFHTMPARDLISWNSMMASHVEDGKYSHAI 538
Query: 314 KVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDL 373
+ EM + + VT LSAC K+K I + + V +V +
Sbjct: 539 LLLVEMLKTRKAMNYVTFTTALSACYNLEKLK----IVHAFVIHFAVHHNLIIGNTLVTM 594
Query: 374 LGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
G+ G +++A K+ + MP E D + W +L+G
Sbjct: 595 YGKFGLMDEAQKVCKIMP-ERDVVTWNALIGG 625
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 130/284 (45%), Gaps = 19/284 (6%)
Query: 154 KAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVID 213
K + ++ +N+++ + G ++ A+ VFD+M +++DA+W+ MI + R G+ + +
Sbjct: 175 KDVIQQNTFYTNTLVNMYSKFGSIKYAQHVFDKMYDRNDASWNNMISGFVRVGWYHKAMQ 234
Query: 214 LFTLMQKEGVRVNFPSLISVLSVCASLASLDHG-RQVHAQLVRCQFDVDVYVASVLITMY 272
F M + GV + + S+++ C + G RQ+H +V+C +V+V + L+ Y
Sbjct: 235 FFCHMFENGVTPSSYVIASMVTACDRSGCMTEGARQIHGYVVKCGLMSNVFVGTSLLHFY 294
Query: 273 IKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLV 332
G + + +F+ +IV W S++ YA G ++ L ++ + +G++ T+
Sbjct: 295 GTHGSVSEANKLFEEIEEPNIVSWTSLMVCYADNGHTKEVLNIYRHLRHNGLICTGNTMA 354
Query: 333 GVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPF 392
V+ C G G +I + L ++ + G VE+A ++ M
Sbjct: 355 TVIRTCGMFGDKTMGYQILGDVIKSGLDTSSVSVANSLISMFGNYDSVEEASRVFNNMQ- 413
Query: 393 EPDAIIWGSLLGAC-----------------RTHMKLDLAEVAA 419
E D I W S++ A RTH K D ++A
Sbjct: 414 ERDTISWNSIITASAHNGRFEESLGHFFWMRRTHPKTDYITISA 457
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 76/158 (48%), Gaps = 1/158 (0%)
Query: 246 GRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQ 305
G+ +HA V+ + + + L+ MY K G + + +FD ++ WN++ISG+ +
Sbjct: 166 GKALHALCVKDVIQQNTFYTNTLVNMYSKFGSIKYAQHVFDKMYDRNDASWNNMISGFVR 225
Query: 306 YGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTE 365
G K+++ F MF +GV P + +++AC +G + EG K +
Sbjct: 226 VGWYHKAMQFFCHMFENGVTPSSYVIASMVTACDRSGCMTEGARQIHGYVVKCGLMSNVF 285
Query: 366 HYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
++ G G V +A KL E + EP+ + W SL+
Sbjct: 286 VGTSLLHFYGTHGSVSEANKLFEEIE-EPNIVSWTSLM 322
>gi|356529693|ref|XP_003533423.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65570-like [Glycine max]
Length = 676
Score = 397 bits (1020), Expect = e-107, Method: Compositional matrix adjust.
Identities = 215/621 (34%), Positives = 360/621 (57%), Gaps = 26/621 (4%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVV----SWTVMLGGFIRDSRIDDA 56
+P R++V+W +M+ ++ G EA + M + V+ +++ + F + I
Sbjct: 61 LPSRHIVTWNSMISSHISHGKSKEAVEFYGNMLMEGVLPDAYTFSAISKAFSQLGLIRHG 120
Query: 57 RRLFDM-----MPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVN 111
+R + + D + +V Y + ++ + +F + +K+V+ +T +I GY
Sbjct: 121 QRAHGLAVVLGLEVLDGFVASALVDMYAKFDKMRDAHLVFRRVLEKDVVLFTALIVGYAQ 180
Query: 112 NNRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQD--AWELFKAMPMKS----V 161
+ A K+FE M + NE + +L+ CG + D +L + +KS V
Sbjct: 181 HGLDGEALKIFEDMVNRGVKPNEYTLACILI---NCGNLGDLVNGQLIHGLVVKSGLESV 237
Query: 162 VASNSMILGL-GQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQK 220
VAS + +L + + ++ + VF+Q+ + TW+ + + G E + +F M +
Sbjct: 238 VASQTSLLTMYSRCNMIEDSIKVFNQLDYANQVTWTSFVVGLVQNGREEVAVSIFREMIR 297
Query: 221 EGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVK 280
+ N +L S+L C+SLA L+ G Q+HA ++ D + Y + LI +Y KCG + K
Sbjct: 298 CSISPNPFTLSSILQACSSLAMLEVGEQIHAITMKLGLDGNKYAGAALINLYGKCGNMDK 357
Query: 281 GKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSY 340
+ +FD D+V NS+I YAQ G G ++L++F + + G++P+ VT + +L AC+
Sbjct: 358 ARSVFDVLTELDVVAINSMIYAYAQNGFGHEALELFERLKNMGLVPNGVTFISILLACNN 417
Query: 341 TGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWG 400
G V+EG +IF S+++ + +E +H+ CM+DLLGR+ ++E+A LIE + PD ++W
Sbjct: 418 AGLVEEGCQIFASIRNNHNIELTIDHFTCMIDLLGRSRRLEEAAMLIEEVR-NPDVVLWR 476
Query: 401 SLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRN 460
+LL +C+ H ++++AE K+L+L P + G +ILL+N+YAS G+++ V E++ +R
Sbjct: 477 TLLNSCKIHGEVEMAEKVMSKILELAPGDGGTHILLTNLYASAGKWNQVIEMKSTIRDLK 536
Query: 461 VIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDV 520
+ K P SW++V+++VH F D +SHP I ML + ++ GY P++ FVL D+
Sbjct: 537 LKKSPAMSWVDVDREVHTFMAGD-LSHPRSLEIFEMLHGLMKKVKTLGYNPNTRFVLQDL 595
Query: 521 DEEEKVHSLRYHSEKLAVAYGLVK-LPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREII 579
DEE+K+ SL YHSEKLA+AY L K + IR+ KNLRVCGDCHS IK +S + GR+II
Sbjct: 596 DEEKKISSLYYHSEKLAIAYALWKTIGRTTTIRIFKNLRVCGDCHSWIKFVSLLTGRDII 655
Query: 580 LRDANRFHHFKDGLCSCRDYW 600
RD+ RFHHFK GLCSC+DYW
Sbjct: 656 ARDSKRFHHFKGGLCSCKDYW 676
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/343 (23%), Positives = 176/343 (51%), Gaps = 15/343 (4%)
Query: 74 MVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLF------EVMPE 127
++ GY + G + E R++FDE+P +++++W +MIS ++++ + A + + V+P+
Sbjct: 41 LIDGYIKCGSLAEARKLFDELPSRHIVTWNSMISSHISHGKSKEAVEFYGNMLMEGVLPD 100
Query: 128 KNEVSWTAMLMGYTQCGRI---QDAWELFKAMPMKSV--VASNSMILGLGQNGEVQKARV 182
+++A+ ++Q G I Q A L + ++ + +++++ + +++ A +
Sbjct: 101 A--YTFSAISKAFSQLGLIRHGQRAHGLAVVLGLEVLDGFVASALVDMYAKFDKMRDAHL 158
Query: 183 VFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLAS 242
VF ++ EKD ++ +I Y + G + E + +F M GV+ N +L +L C +L
Sbjct: 159 VFRRVLEKDVVLFTALIVGYAQHGLDGEALKIFEDMVNRGVKPNEYTLACILINCGNLGD 218
Query: 243 LDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISG 302
L +G+ +H +V+ + V + L+TMY +C + +F+ + V W S + G
Sbjct: 219 LVNGQLIHGLVVKSGLESVVASQTSLLTMYSRCNMIEDSIKVFNQLDYANQVTWTSFVVG 278
Query: 303 YAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEP 362
Q G E ++ +F EM + P+ TL +L ACS ++ G +I ++ K ++
Sbjct: 279 LVQNGREEVAVSIFREMIRCSISPNPFTLSSILQACSSLAMLEVGEQI-HAITMKLGLDG 337
Query: 363 KTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
A +++L G+ G ++ A + + + E D + S++ A
Sbjct: 338 NKYAGAALINLYGKCGNMDKARSVFDVLT-ELDVVAINSMIYA 379
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 123/240 (51%), Gaps = 3/240 (1%)
Query: 165 NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVR 224
+ +I G + G + +AR +FD++ + TW+ MI + G E ++ + M EGV
Sbjct: 39 HKLIDGYIKCGSLAEARKLFDELPSRHIVTWNSMISSHISHGKSKEAVEFYGNMLMEGVL 98
Query: 225 VNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDV-DVYVASVLITMYIKCGELVKGKL 283
+ + ++ + L + HG++ H V +V D +VAS L+ MY K ++ L
Sbjct: 99 PDAYTFSAISKAFSQLGLIRHGQRAHGLAVVLGLEVLDGFVASALVDMYAKFDKMRDAHL 158
Query: 284 IFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGK 343
+F KD+V++ ++I GYAQ+GL ++LK+F +M + GV P++ TL +L C G
Sbjct: 159 VFRRVLEKDVVLFTALIVGYAQHGLDGEALKIFEDMVNRGVKPNEYTLACILINCGNLGD 218
Query: 344 VKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
+ G ++ + K +E ++ + R +ED++K+ + + + + W S +
Sbjct: 219 LVNG-QLIHGLVVKSGLESVVASQTSLLTMYSRCNMIEDSIKVFNQLDY-ANQVTWTSFV 276
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 89/185 (48%), Gaps = 4/185 (2%)
Query: 225 VNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLI 284
+NF S S+++ A SL R VH +++ F ++ LI YIKCG L + + +
Sbjct: 1 MNFYS--SLIAQSAHTKSLTTLRAVHTNVIKSGFSYS-FLGHKLIDGYIKCGSLAEARKL 57
Query: 285 FDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKV 344
FD S+ IV WNS+IS + +G +++++ + M GV+PD T + A S G +
Sbjct: 58 FDELPSRHIVTWNSMISSHISHGKSKEAVEFYGNMLMEGVLPDAYTFSAISKAFSQLGLI 117
Query: 345 KEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLG 404
+ G+ L + +VD+ + ++ DA L+ E D +++ +L+
Sbjct: 118 RHGQRAHGLAVVLGLEVLDGFVASALVDMYAKFDKMRDA-HLVFRRVLEKDVVLFTALIV 176
Query: 405 ACRTH 409
H
Sbjct: 177 GYAQH 181
>gi|297819260|ref|XP_002877513.1| hypothetical protein ARALYDRAFT_905886 [Arabidopsis lyrata subsp.
lyrata]
gi|297323351|gb|EFH53772.1| hypothetical protein ARALYDRAFT_905886 [Arabidopsis lyrata subsp.
lyrata]
Length = 657
Score = 397 bits (1020), Expect = e-107, Method: Compositional matrix adjust.
Identities = 216/612 (35%), Positives = 346/612 (56%), Gaps = 19/612 (3%)
Query: 7 VSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDA----RRLFDM 62
+S +++ +EG + +A + Q + ++ +++ S + D R + D
Sbjct: 47 ISNNQLIQSLCKEGKLKQALRVLSQESSPSQQTYELLILCCGHRSSLSDGLRVHRHILDN 106
Query: 63 MPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYV----NNNRIDVA 118
++D T ++ Y G VD R++FD+ K+ + W + + +
Sbjct: 107 GSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLY 166
Query: 119 RKLFEVMPEKNEVSWTAMLMG--YTQCG--RIQDAWELFKAMPMKS----VVASNSMILG 170
K+ + E + ++T +L ++C + E+ + + V +++
Sbjct: 167 WKMNRIGVESDRFTYTYVLKACVASECTADHLTKGKEIHAHLTRRGYNSHVYIMTTLVDM 226
Query: 171 LGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEG--VRVNFP 228
+ G V A VF+ M ++ +WS MI Y + G E + F M E N
Sbjct: 227 YARFGCVDYASYVFNGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMTETKDSSPNSV 286
Query: 229 SLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNF 288
+++SVL CASLA+L+ GR +H ++R D + V S L+TMY +CG+L G+ +FD
Sbjct: 287 TMVSVLQACASLAALEQGRLIHGYILRRGLDSILPVISALVTMYGRCGKLDVGQRVFDRM 346
Query: 289 ASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGR 348
+D+V WNS+IS Y +G G K++++F EM ++G P VT V VL ACS+ G V+EG+
Sbjct: 347 HDRDVVSWNSLISSYGVHGYGRKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGK 406
Query: 349 EIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRT 408
+FESM + ++P+ EHYACMVDLLGRA ++++A K+++ M EP +WGSLLG+CR
Sbjct: 407 RLFESMWRDHGIKPQVEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRI 466
Query: 409 HMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCS 468
H ++LAE A+++L LEPKNAG Y+LL++IYA + +V ++K + R + K PG
Sbjct: 467 HGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRC 526
Query: 469 WIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHS 528
W+EV +K++ F D + P I L K+ ++E GY P + VL++++ EEK
Sbjct: 527 WMEVRRKMYSFVSMDEFN-PLMEQIHAFLVKLAEDMKEKGYIPQTKGVLYELETEEKERI 585
Query: 529 LRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHH 588
+ HSEKLA+A+GL+ +G PIR+ KNLR+C DCH K ISK M +EI++RD NRFH
Sbjct: 586 VLGHSEKLALAFGLINTSKGEPIRITKNLRLCEDCHLFTKFISKFMEKEILVRDVNRFHR 645
Query: 589 FKDGLCSCRDYW 600
FK+G+CSC DYW
Sbjct: 646 FKNGVCSCGDYW 657
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 123/280 (43%), Gaps = 32/280 (11%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMP----EKNVVSWTVMLGGFIRDSRIDD--- 55
+R + W A+ R G E L+W+M E + ++T +L + D
Sbjct: 140 KRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTADHLT 199
Query: 56 ---------ARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMI 106
RR ++ V T +V Y + G VD +F+ MP +NV+SW+ MI
Sbjct: 200 KGKEIHAHLTRRGYN----SHVYIMTTLVDMYARFGCVDYASYVFNGMPVRNVVSWSAMI 255
Query: 107 SGYVNNNR-IDVARKLFEVMPEK-----NEVSWTAML-----MGYTQCGRIQDAWELFKA 155
+ Y N + + R E+M E N V+ ++L + + GR+ + L +
Sbjct: 256 ACYAKNGKAFEALRTFREMMTETKDSSPNSVTMVSVLQACASLAALEQGRLIHGYILRRG 315
Query: 156 MPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLF 215
+ V S +++ G+ G++ + VFD+M ++D +W+ +I Y GY + I +F
Sbjct: 316 LDSILPVIS-ALVTMYGRCGKLDVGQRVFDRMHDRDVVSWNSLISSYGVHGYGRKAIQIF 374
Query: 216 TLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVR 255
M G + +SVL C+ ++ G+++ + R
Sbjct: 375 EEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFESMWR 414
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 103/219 (47%), Gaps = 20/219 (9%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM------PEKNVVSWTVMLGGFIRDSRID 54
MP RNVVSW+AM+ Y + G EA F +M N V+ +L + ++
Sbjct: 243 MPVRNVVSWSAMIACYAKNGKAFEALRTFREMMTETKDSSPNSVTMVSVLQACASLAALE 302
Query: 55 DARRLFDMMPEKDVVA----QTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYV 110
R + + + + + + +V Y + G++D G+ +FD M ++V+SW ++IS Y
Sbjct: 303 QGRLIHGYILRRGLDSILPVISALVTMYGRCGKLDVGQRVFDRMHDRDVVSWNSLISSYG 362
Query: 111 NNNRIDVARKLFEVM----PEKNEVSWTAMLMGYTQCGRIQDAWELFKAM----PMKSVV 162
+ A ++FE M V++ ++L + G +++ LF++M +K V
Sbjct: 363 VHGYGRKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFESMWRDHGIKPQV 422
Query: 163 ASNS-MILGLGQNGEV-QKARVVFDQMREKDDATWSGMI 199
+ M+ LG+ + + A++V D E W ++
Sbjct: 423 EHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLL 461
>gi|297800922|ref|XP_002868345.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314181|gb|EFH44604.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1047
Score = 397 bits (1020), Expect = e-107, Method: Compositional matrix adjust.
Identities = 224/642 (34%), Positives = 346/642 (53%), Gaps = 58/642 (9%)
Query: 11 AMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVA 70
A++ Y + I A F + +NVV W VML + + ++ R+F M +++V
Sbjct: 412 ALLNLYAKCSDIETALNYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVP 471
Query: 71 ---------QTNMVLG------------------------------YCQDGRVDEGREIF 91
+T + LG Y + G++D +I
Sbjct: 472 NQYTYPSILKTCIRLGDLELGEQIHSQIIKTSFQLNAYVCSVLIDMYAKLGKLDTAWDIL 531
Query: 92 DEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEK----------NEVSWTAMLMGYT 141
K+V+SWTTMI+GY N D A F M ++ N VS A L
Sbjct: 532 IRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALK 591
Query: 142 QCGRI--QDAWELFKA-MPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGM 198
+ +I Q F + +P + N+++ + G +++A + F+Q D+ W+ +
Sbjct: 592 EGQQIHAQACVSGFSSDLPFQ-----NALVTLYSKCGNIEEAYLAFEQTEAGDNIAWNAL 646
Query: 199 IKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQF 258
+ +++ G E + +F M +EG+ N + S + + A++ G+QVHA + + +
Sbjct: 647 VSGFQQSGNNEEALRVFARMNREGIDSNNFTFGSAVKAASETANMKQGKQVHAVITKTGY 706
Query: 259 DVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHE 318
D + V + +I+MY KCG + K F + K+ V WN++I+ Y+++G G ++L F +
Sbjct: 707 DSETEVCNAIISMYAKCGSISDAKKQFLELSMKNEVSWNAMINAYSKHGFGSEALDSFDQ 766
Query: 319 MFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAG 378
M S V P+ VTLVGVLSACS+ G V +G E FESM ++Y + PK EHY C+VD+L RAG
Sbjct: 767 MIHSNVRPNHVTLVGVLSACSHIGLVDKGIEYFESMNTEYGLAPKPEHYVCVVDMLTRAG 826
Query: 379 QVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSN 438
+ A I MP EPDA++W +LL AC H +++ E AA LL+LEP+++ Y+LLSN
Sbjct: 827 LLSRAKDFILEMPIEPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSN 886
Query: 439 IYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLE 498
+YA ++ R+ M+++ V K PG SWIEV+ +H F D +HP I +
Sbjct: 887 LYAVCRKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGD-QNHPLADEIHEYFK 945
Query: 499 KIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLR 558
+ E GY D +L ++ +E+K ++ HSEKLA+++GL+ LP +PI VMKNLR
Sbjct: 946 DLTKRASEIGYVQDCFSLLSELQQEQKDPTIFIHSEKLAISFGLLSLPATMPINVMKNLR 1005
Query: 559 VCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
VC DCH IK +SKV REII+RDA RFHHF+ G CSC+DYW
Sbjct: 1006 VCNDCHDWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1047
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 103/387 (26%), Positives = 180/387 (46%), Gaps = 18/387 (4%)
Query: 33 PEKNVVSWTVMLGGFIRDSRIDDARRLFDMMP----EKDVVAQTNMVLGYCQDGRVDEGR 88
P + W ++ G + +D+ R+L + + + ++ Y G +D
Sbjct: 65 PNHQTLKW-LLEGCLKTNGSLDEGRKLHSQILKLGFDNNACLSEKLLDFYLFKGDLDGAL 123
Query: 89 EIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGR--- 145
++FDEMP++ + +W MI + + LF M +N G + R
Sbjct: 124 KVFDEMPERTIFTWNKMIKELASRSLSGKVFCLFGRMVNENVTPNEGTFSGVLEACRGGS 183
Query: 146 -IQDAWELFKAMPM-----KSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMI 199
D E A + KS + N +I +NG V +AR VFD + KD ++W MI
Sbjct: 184 VAFDVVEQIHARIIYQGLGKSTIVCNPLIDLYSRNGFVDRARRVFDGLYLKDHSSWVAMI 243
Query: 200 KVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFD 259
+ E+E I LF M G+ + SVLS C + SL+ G Q+H +++ F
Sbjct: 244 SGLSKNECEVEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFS 303
Query: 260 VDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEM 319
D YV + L+++Y G L+ + IF N + +D V +N++I+G +Q G GEK++++F M
Sbjct: 304 SDTYVCNALVSLYFHLGSLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRM 363
Query: 320 FSSGVMPDDVTLVGVLSACSYTGKVKEGREIFE-SMKSKYLVEPKTEHYACMVDLLGRAG 378
G+ PD TL ++ ACS G + G+++ + K + K E +++L +
Sbjct: 364 QLDGLEPDSNTLASLVVACSSDGTLFSGQQLHAYTTKLGFASNDKIE--GALLNLYAKCS 421
Query: 379 QVEDAMKLIEAMPFEPDAIIWGSLLGA 405
+E A+ E + ++W +L A
Sbjct: 422 DIETALNYFLETEVE-NVVLWNVMLVA 447
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 98/449 (21%), Positives = 200/449 (44%), Gaps = 37/449 (8%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDD----- 55
MPER + +W M++ + + LF +M +NV G + R
Sbjct: 129 MPERTIFTWNKMIKELASRSLSGKVFCLFGRMVNENVTPNEGTFSGVLEACRGGSVAFDV 188
Query: 56 -----ARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYV 110
AR ++ + + +V + L Y ++G VD R +FD + K+ SW MISG
Sbjct: 189 VEQIHARIIYQGLGKSTIVCNPLIDL-YSRNGFVDRARRVFDGLYLKDHSSWVAMISGLS 247
Query: 111 NNNRIDVARKLF------EVMPEKNEVSWTAMLMGYTQCGRIQ--DAWELFKAMPMKSVV 162
N A +LF +MP +++++L + C +I+ + E + +K
Sbjct: 248 KNECEVEAIRLFCDMYVLGIMP--TPYAFSSVL---SACKKIESLEIGEQLHGLVLKLGF 302
Query: 163 AS-----NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTL 217
+S N+++ G + A +F M ++D T++ +I + GY + ++LF
Sbjct: 303 SSDTYVCNALVSLYFHLGSLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKR 362
Query: 218 MQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGE 277
MQ +G+ + +L S++ C+S +L G+Q+HA + F + + L+ +Y KC +
Sbjct: 363 MQLDGLEPDSNTLASLVVACSSDGTLFSGQQLHAYTTKLGFASNDKIEGALLNLYAKCSD 422
Query: 278 LVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSA 337
+ F +++V+WN ++ Y S ++F +M ++P+ T +L
Sbjct: 423 IETALNYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKT 482
Query: 338 CSYTGKVKEGREIFES-MKSKYLVEPKTEHYAC--MVDLLGRAGQVEDAMKLIEAMPFEP 394
C G ++ G +I +K+ + + Y C ++D+ + G+++ A ++
Sbjct: 483 CIRLGDLELGEQIHSQIIKTSFQLNA----YVCSVLIDMYAKLGKLDTAWDILIRFA-GK 537
Query: 395 DAIIWGSLLGACRTHMKLDLAEVAAKKLL 423
D + W +++ + D A +++L
Sbjct: 538 DVVSWTTMIAGYTQYNFDDKALTTFRQML 566
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/321 (21%), Positives = 148/321 (46%), Gaps = 26/321 (8%)
Query: 4 RNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMM 63
++VVSWT M+ GY + +A T F QM ++ + S V L + A + +
Sbjct: 537 KDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQI 596
Query: 64 PEKDVVA--------QTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRI 115
+ V+ Q +V Y + G ++E F++ + I+W ++SG+ +
Sbjct: 597 HAQACVSGFSSDLPFQNALVTLYSKCGNIEEAYLAFEQTEAGDNIAWNALVSGFQQSGNN 656
Query: 116 DVARKLFEVMP----EKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVAS-----NS 166
+ A ++F M + N ++ + + ++ ++ ++ A+ K+ S N+
Sbjct: 657 EEALRVFARMNREGIDSNNFTFGSAVKAASETANMKQGKQV-HAVITKTGYDSETEVCNA 715
Query: 167 MILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVN 226
+I + G + A+ F ++ K++ +W+ MI Y + G+ E +D F M VR N
Sbjct: 716 IISMYAKCGSISDAKKQFLELSMKNEVSWNAMINAYSKHGFGSEALDSFDQMIHSNVRPN 775
Query: 227 FPSLISVLSVCASLASLDHGRQVHAQLVRCQFDV----DVYVASVLITMYIKCGELVKGK 282
+L+ VLS C+ + +D G + + + + ++ + + YV ++ M + G L + K
Sbjct: 776 HVTLVGVLSACSHIGLVDKGIE-YFESMNTEYGLAPKPEHYVC--VVDMLTRAGLLSRAK 832
Query: 283 -LIFDNFASKDIVMWNSIISG 302
I + D ++W +++S
Sbjct: 833 DFILEMPIEPDALVWRTLLSA 853
>gi|125544467|gb|EAY90606.1| hypothetical protein OsI_12205 [Oryza sativa Indica Group]
Length = 818
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 233/700 (33%), Positives = 357/700 (51%), Gaps = 103/700 (14%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLF----WQMPEKNVVSWTVML------------ 44
MPERN+VS+ +V+ + + G A LF W+ E N T ML
Sbjct: 122 MPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMDAAGLA 181
Query: 45 GG--------------FIRDSRID---------DARRLFDMMPEKDVVAQTNMVLGYCQD 81
GG F+ ID DA +F+ + KD V T MV Y ++
Sbjct: 182 GGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSEN 241
Query: 82 ---------------------------------------------------GRVDEGREI 90
G + + R
Sbjct: 242 DCPENAFRCAQSCSLLAISCARQGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLA 301
Query: 91 FDEMPKKNVISWTTMISGYVNNNRIDVARKLF------EVMPEKNEVSWTAMLMGYTQCG 144
F+ +P +VI + MIS Y +N+ + A +LF V+P NE S +++L T
Sbjct: 302 FEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLP--NEYSLSSVLQACTNMV 359
Query: 145 RIQDAWEL----FKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIK 200
++ ++ K + N+++ + ++ + +F +R+ ++ +W+ ++
Sbjct: 360 QLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVV 419
Query: 201 VYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDV 260
+ + G E + +F MQ + + SVL CAS AS+ H Q+H + + F+
Sbjct: 420 GFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNN 479
Query: 261 DVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMF 320
D + + LI Y KCG + +F + +DI+ WN+IISGYA +G +L++F M
Sbjct: 480 DTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALELFDRMN 539
Query: 321 SSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQV 380
S V +D+T V +LS C TG V G +F+SM+ + ++P EHY C+V LLGRAG++
Sbjct: 540 KSNVESNDITFVALLSVCCSTGLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRL 599
Query: 381 EDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIY 440
DA++ I +P P A++W +LL +C H + L +A+K+L++EP++ Y+LLSN+Y
Sbjct: 600 NDALQFIGDIPSAPSAMVWRALLSSCIIHKNVALGRFSAEKILEIEPQDETTYVLLSNMY 659
Query: 441 ASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKI 500
A+ G VA LRK+MR V K PG SW+E++ ++H F+ V HP+ +I MLE +
Sbjct: 660 AAAGSLDQVALLRKSMRNIGVRKVPGLSWVEIKGEIHAFS-VGSVDHPDMRVINAMLEWL 718
Query: 501 GGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVC 560
GY PD + VLHDVD+E+K L HSE+LA+AYGLV P G PIR++KNLR C
Sbjct: 719 NLKTSREGYIPDINVVLHDVDKEQKTRMLWVHSERLALAYGLVMTPPGHPIRILKNLRSC 778
Query: 561 GDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
DCH+A +ISK++ REII+RD NRFHHF+DG CSC DYW
Sbjct: 779 LDCHTAFTVISKIVKREIIVRDINRFHHFEDGKCSCGDYW 818
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 116/484 (23%), Positives = 210/484 (43%), Gaps = 62/484 (12%)
Query: 41 TVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFD----EMPK 96
V+L + + + ARRLFD MPE+++V+ +V + Q G + +F E +
Sbjct: 100 NVLLNMYGKLGPLASARRLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHE 159
Query: 97 KNVISWTTMI--------------------------SGYVNNNRIDV---------ARKL 121
N TTM+ + +V + ID A +
Sbjct: 160 VNQFVLTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHV 219
Query: 122 FEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGL---------- 171
F + K+ V WTAM+ Y++ ++A+ ++ + ++ + I G
Sbjct: 220 FNGIVRKDAVVWTAMVSCYSENDCPENAFRCAQSCSLLAISCARQGIHGCAIKTLNDTEP 279
Query: 172 ----------GQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKE 221
+ G+++ AR+ F+ + D S MI Y + + +LF + +
Sbjct: 280 HVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRS 339
Query: 222 GVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKG 281
V N SL SVL C ++ LD G+Q+H ++ + D++V + L+ Y KC ++
Sbjct: 340 SVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSS 399
Query: 282 KLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYT 341
IF + + V WN+I+ G++Q GLGE++L VF EM ++ + VT VL AC+ T
Sbjct: 400 LKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACAST 459
Query: 342 GKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGS 401
++ +I S++ K T ++D + G + DA+K+ + + E D I W +
Sbjct: 460 ASIRHAGQIHCSIE-KSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHL-MERDIISWNA 517
Query: 402 LLGACRTH-MKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRN 460
++ H D E+ + N ++ L ++ S G + L +MR +
Sbjct: 518 IISGYALHGQAADALELFDRMNKSNVESNDITFVALLSVCCSTGLVNHGLSLFDSMRIDH 577
Query: 461 VIKP 464
IKP
Sbjct: 578 GIKP 581
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Query: 234 LSVCASLASLDHGRQVHAQLVR--CQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASK 291
L C + GR VH +VR +D++ A+VL+ MY K G L + +FD +
Sbjct: 66 LQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASARRLFDRMPER 125
Query: 292 DIVMWNSIISGYAQYGLGEKSLKVFHEM 319
++V + +++ +AQ G E + +F +
Sbjct: 126 NMVSFVTLVQAHAQRGDFEAAAALFRRL 153
>gi|414586388|tpg|DAA36959.1| TPA: hypothetical protein ZEAMMB73_269943 [Zea mays]
Length = 643
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 198/521 (38%), Positives = 310/521 (59%), Gaps = 9/521 (1%)
Query: 88 REIFDEMPKKNVISWTTMISGYVNNNR----IDVARKLFEVMPEKNEVSWTAMLMGYTQC 143
R++FDEM +++V+SW T++ G R + RK+ + + + +L + +C
Sbjct: 124 RKVFDEMIERDVVSWNTLVLGCAEEGRHHEALGFVRKMCREGFRPDSFTLSTVLPIFAEC 183
Query: 144 GRIQDAWEL----FKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMI 199
++ E+ F+ V +S+I + VFD + +D W+ ++
Sbjct: 184 ADVKRGLEVHGFAFRNGFDSDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDHILWNSLL 243
Query: 200 KVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFD 259
+ G E + +F M + GVR + S++ VC +LASL G+Q+HA ++ F+
Sbjct: 244 AGCAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPVCGNLASLRFGKQLHAYVICGGFE 303
Query: 260 VDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEM 319
+V+++S LI MY KCGE+ IFD +S D+V W ++I GYA +G ++L +F M
Sbjct: 304 DNVFISSSLIDMYCKCGEISIAHCIFDKMSSPDVVSWTAMIMGYALHGPAREALVLFERM 363
Query: 320 FSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQ 379
P+ +T + VL+ACS+ G V +G + F+SM + Y + P EH+A + D LGRAG+
Sbjct: 364 ELGNAKPNHITFLAVLTACSHAGLVDKGWKYFKSMSNHYGIVPTLEHFAALADTLGRAGE 423
Query: 380 VEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNI 439
+++A I M +P A +W +LL ACR H LAE AKK+++LEP++ G +++LSN+
Sbjct: 424 LDEAYNFISKMQIKPTASVWSTLLRACRVHKNTMLAEEVAKKIMELEPRSIGSHVVLSNM 483
Query: 440 YASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEK 499
Y++ GR+++ A LR++MRK+ + K P CSWIEV+ K+H+F D SHP + I+ L
Sbjct: 484 YSASGRWNEAAHLRESMRKKGMKKDPACSWIEVKSKLHVFVAHD-RSHPWYDRIIDALNA 542
Query: 500 IGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRV 559
+ G+ P++ V D++EE K + L HSEKLA+ +G++ P G IRVMKNLRV
Sbjct: 543 FSEQMAREGHVPNTEDVFQDIEEEHKSYVLCGHSEKLAIVFGIISTPAGTKIRVMKNLRV 602
Query: 560 CGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
C DCH+ K ISK+ REI++RDANRFHHFKDG CSC D+W
Sbjct: 603 CIDCHTVTKFISKLADREIVVRDANRFHHFKDGNCSCGDFW 643
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 117/236 (49%), Gaps = 10/236 (4%)
Query: 172 GQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLI 231
G + + R VFD+M E+D +W+ ++ +G E + M +EG R + +L
Sbjct: 115 GSSTAFESVRKVFDEMIERDVVSWNTLVLGCAEEGRHHEALGFVRKMCREGFRPDSFTLS 174
Query: 232 SVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASK 291
+VL + A A + G +VH R FD DV+V S LI MY C +FDN +
Sbjct: 175 TVLPIFAECADVKRGLEVHGFAFRNGFDSDVFVGSSLIDMYANCTRTDYSVKVFDNLPVR 234
Query: 292 DIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIF 351
D ++WNS+++G AQ G E++L +F M +GV P VT ++ C ++ G+++
Sbjct: 235 DHILWNSLLAGCAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPVCGNLASLRFGKQL- 293
Query: 352 ESMKSKYLV----EPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
Y++ E + ++D+ + G++ A + + M PD + W +++
Sbjct: 294 ----HAYVICGGFEDNVFISSSLIDMYCKCGEISIAHCIFDKMS-SPDVVSWTAMI 344
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 118/273 (43%), Gaps = 38/273 (13%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM------PEKNVVSWTVMLGGFIRDSR-- 52
M ER+VVSW +V G EEG EA +M P+ +S + + D +
Sbjct: 130 MIERDVVSWNTLVLGCAEEGRHHEALGFVRKMCREGFRPDSFTLSTVLPIFAECADVKRG 189
Query: 53 IDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
++ F + DV ++++ Y R D ++FD +P ++ I W ++++G N
Sbjct: 190 LEVHGFAFRNGFDSDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDHILWNSLLAGCAQN 249
Query: 113 NRIDVARKLFEVMPEKN----EVSWTAM---------------LMGYTQCGRIQDAWELF 153
++ A +F M + V+++++ L Y CG +D
Sbjct: 250 GSVEEALGIFRRMLQAGVRPVPVTFSSLIPVCGNLASLRFGKQLHAYVICGGFED----- 304
Query: 154 KAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVID 213
+V S+S+I + GE+ A +FD+M D +W+ MI Y G E +
Sbjct: 305 ------NVFISSSLIDMYCKCGEISIAHCIFDKMSSPDVVSWTAMIMGYALHGPAREALV 358
Query: 214 LFTLMQKEGVRVNFPSLISVLSVCASLASLDHG 246
LF M+ + N + ++VL+ C+ +D G
Sbjct: 359 LFERMELGNAKPNHITFLAVLTACSHAGLVDKG 391
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 111/251 (44%), Gaps = 23/251 (9%)
Query: 195 WSGMIKVYERKGYELEVIDLFTLMQKEGV-RVNFP-SLISVLSVCASLASLDHGRQVHAQ 252
W+ I+ +G+ + + LF M+ R + P SL + L CA+L G +HA
Sbjct: 16 WAQQIRAAAAEGHFCDAVSLFLRMRASAAPRSSVPASLPAALKSCAALGLSALGASLHAL 75
Query: 253 LVRCQFDVDVYVASVLITMYIK--CGEL---------VKG--------KLIFDNFASKDI 293
+R D + A+ L+ +Y K C L V G + +FD +D+
Sbjct: 76 AIRSGAFADRFTANALLNLYCKVPCSYLDSTGVAIVDVPGSSTAFESVRKVFDEMIERDV 135
Query: 294 VMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFES 353
V WN+++ G A+ G ++L +M G PD TL VL + VK G E+
Sbjct: 136 VSWNTLVLGCAEEGRHHEALGFVRKMCREGFRPDSFTLSTVLPIFAECADVKRGLEV-HG 194
Query: 354 MKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLD 413
+ + + ++D+ + + ++K+ + +P D I+W SLL C + ++
Sbjct: 195 FAFRNGFDSDVFVGSSLIDMYANCTRTDYSVKVFDNLPVR-DHILWNSLLAGCAQNGSVE 253
Query: 414 LAEVAAKKLLQ 424
A +++LQ
Sbjct: 254 EALGIFRRMLQ 264
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 98/219 (44%), Gaps = 18/219 (8%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
+P R+ + W +++ G + G + EA +F +M + V V I + R
Sbjct: 231 LPVRDHILWNSLLAGCAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPVCGNLASLRFG 290
Query: 61 DMMP--------EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+ E +V ++++ YC+ G + IFD+M +V+SWT MI GY +
Sbjct: 291 KQLHAYVICGGFEDNVFISSSLIDMYCKCGEISIAHCIFDKMSSPDVVSWTAMIMGYALH 350
Query: 113 NRIDVARKLFEVM----PEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASN--- 165
A LFE M + N +++ A+L + G + W+ FK+M +
Sbjct: 351 GPAREALVLFERMELGNAKPNHITFLAVLTACSHAGLVDKGWKYFKSMSNHYGIVPTLEH 410
Query: 166 --SMILGLGQNGEVQKARVVFDQMREKDDAT-WSGMIKV 201
++ LG+ GE+ +A +M+ K A+ WS +++
Sbjct: 411 FAALADTLGRAGELDEAYNFISKMQIKPTASVWSTLLRA 449
>gi|224092360|ref|XP_002309575.1| predicted protein [Populus trichocarpa]
gi|222855551|gb|EEE93098.1| predicted protein [Populus trichocarpa]
Length = 653
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 222/624 (35%), Positives = 369/624 (59%), Gaps = 27/624 (4%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM------PEKNVVSWTVMLGGFIRDSRID 54
M +RNVVSWTA++ G+++ G E+ LF +M P S + G + +D
Sbjct: 33 MLKRNVVSWTALMCGHIQNGNPLESLLLFSKMGLSGVKPNDFTFSTNLKACGLLNG--LD 90
Query: 55 DARRLFDMMPEKDV----VAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYV 110
R++ D+ + V +++ Y + GR++E +F+ MP +N+ISW MI+GY
Sbjct: 91 IGRQIHDICVKTGFDMVNVVGNSIIDMYSKCGRINEAACMFEVMPVRNLISWNAMIAGYT 150
Query: 111 NNNRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVAS-N 165
+ A LF+ M E +E ++T+ L + G I++ ++ + + S N
Sbjct: 151 VAGFCEKALVLFQKMQEVGGFLDEFTFTSTLKACSDLGAIKEGNQIHAFLITGGFLYSVN 210
Query: 166 SMILG-----LGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQK 220
+ + G + G++ AR VF + EK +W+ +I Y ++G E ++LF +++
Sbjct: 211 TAVAGALIDLYVKCGKLFMARRVFSHIEEKHVISWTALILGYAQEGNLAESMELFRQLRE 270
Query: 221 EGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVK 280
++V+ L S++ V A A + G+Q+HA ++ VD+ V + ++ MY+KCG + +
Sbjct: 271 SSIQVDGFILSSMMGVFADFALVQQGKQMHAFAIKVPSGVDISVCNSILDMYLKCGMINE 330
Query: 281 GKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSY 340
+ +F +++++ W +I+GY ++GLG++++++F EM PDDVT + VL CS+
Sbjct: 331 AERLFSEMPARNVISWTVMITGYGKHGLGKEAIRLFDEMQLDSTEPDDVTYLAVLLGCSH 390
Query: 341 TGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWG 400
+G V++G+E F + S + ++ + EHYACMVDLLGRAG++++A L+++MP E + IW
Sbjct: 391 SGLVEKGQEYFSRLCSYHGIKARVEHYACMVDLLGRAGRLKEAKNLVDSMPLEANVGIWQ 450
Query: 401 SLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRN 460
+LL ACR H L+L + LL+L+ +N Y+++SNIYA G + + +R+ ++ +
Sbjct: 451 TLLSACRVHGDLELGKEVGGILLRLDSENPVNYVMMSNIYADAGYWKECERIRELVKSKK 510
Query: 461 VIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREA-GYCPDSSFVLHD 519
+ K G SW+E++K+VH F G D +HP I +L+++ ++E GY + LHD
Sbjct: 511 LKKEAGRSWVEIDKEVHFFYGGD-DTHPLTEKIHEILKEMERRMKEELGYVYGVKYALHD 569
Query: 520 VDEEEKVHSLRYHSEKLAVAYGLV--KLPEGVP-IRVMKNLRVCGDCHSAIKLISKVMGR 576
V+EE K+ +LR HSEKLA+ LV L EG IRV KNLRVCGDCH IK +SK++
Sbjct: 570 VEEESKMDNLRVHSEKLAIGLALVCGGLEEGRKVIRVFKNLRVCGDCHEFIKGLSKILRV 629
Query: 577 EIILRDANRFHHFKDGLCSCRDYW 600
++RDANRFH F+DGLCSCRDYW
Sbjct: 630 VFVVRDANRFHRFEDGLCSCRDYW 653
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 93/393 (23%), Positives = 176/393 (44%), Gaps = 84/393 (21%)
Query: 60 FDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN------- 112
FD+M D++ Y + GR+ ++FD M K+NV+SWT ++ G++ N
Sbjct: 5 FDLMLSNDLIVM------YGKCGRLGVACDVFDRMLKRNVVSWTALMCGHIQNGNPLESL 58
Query: 113 ----------------------------NRIDVARKLFEVMPEKN----EVSWTAMLMGY 140
N +D+ R++ ++ + V +++ Y
Sbjct: 59 LLFSKMGLSGVKPNDFTFSTNLKACGLLNGLDIGRQIHDICVKTGFDMVNVVGNSIIDMY 118
Query: 141 TQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIK 200
++CGRI +A +F+ MP++++++ N+MI G G +KA V+F +M+E
Sbjct: 119 SKCGRINEAACMFEVMPVRNLISWNAMIAGYTVAGFCEKALVLFQKMQEVGG-------- 170
Query: 201 VYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQF-- 258
+D FT S L C+ L ++ G Q+HA L+ F
Sbjct: 171 ----------FLDEFT-------------FTSTLKACSDLGAIKEGNQIHAFLITGGFLY 207
Query: 259 DVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHE 318
V+ VA LI +Y+KCG+L + +F + K ++ W ++I GYAQ G +S+++F +
Sbjct: 208 SVNTAVAGALIDLYVKCGKLFMARRVFSHIEEKHVISWTALILGYAQEGNLAESMELFRQ 267
Query: 319 MFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYAC--MVDLLGR 376
+ S + D L ++ + V++G+++ + K V + C ++D+ +
Sbjct: 268 LRESSIQVDGFILSSMMGVFADFALVQQGKQM-HAFAIK--VPSGVDISVCNSILDMYLK 324
Query: 377 AGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTH 409
G + +A +L MP + I W ++ H
Sbjct: 325 CGMINEAERLFSEMP-ARNVISWTVMITGYGKH 356
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 78/149 (52%), Gaps = 4/149 (2%)
Query: 258 FDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFH 317
F D+ +++ LI MY KCG L +FD +++V W +++ G+ Q G +SL +F
Sbjct: 3 FGFDLMLSNDLIVMYGKCGRLGVACDVFDRMLKRNVVSWTALMCGHIQNGNPLESLLLFS 62
Query: 318 EMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFE-SMKSKYLVEPKTEHYACMVDLLGR 376
+M SGV P+D T L AC + GR+I + +K+ + + + ++D+ +
Sbjct: 63 KMGLSGVKPNDFTFSTNLKACGLLNGLDIGRQIHDICVKTGFDMVNVVGN--SIIDMYSK 120
Query: 377 AGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
G++ +A + E MP + I W +++
Sbjct: 121 CGRINEAACMFEVMPVR-NLISWNAMIAG 148
>gi|218193985|gb|EEC76412.1| hypothetical protein OsI_14066 [Oryza sativa Indica Group]
Length = 628
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 208/570 (36%), Positives = 328/570 (57%), Gaps = 48/570 (8%)
Query: 15 GYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNM 74
Y + G +T A LF ++P +NV+SW ++ GG+I++ + AR+LFD MPE++V M
Sbjct: 85 AYADLGDLTAARELFERIPRRNVMSWNILFGGYIKNGDLGGARKLFDEMPERNVATWNAM 144
Query: 75 VLGYCQDGRVDEGREIF----------DEMPKKNVISWTTMISGYVNNNRID--VARKLF 122
V G G +E +F DE +V + V ++ V R
Sbjct: 145 VAGLTNLGFDEESLGLFLDMRREGMHPDEFGLGSVSRCCAGLRDVVTGRQVHAYVVRSGL 204
Query: 123 EVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARV 182
+++ +++ Y +CG +Q+ + + +P S+V+ N++I G QNG+ + A
Sbjct: 205 ----DRDMCVGSSLAHMYMRCGCLQEGEAVLRMLPSLSIVSCNTIIAGRTQNGDSEGA-- 258
Query: 183 VFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLAS 242
++ F +M+ GV + + +S +S C+ LA+
Sbjct: 259 -----------------------------LEYFCMMRSVGVAADVVTFVSAISSCSDLAA 289
Query: 243 LDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISG 302
L G+Q+H Q+++ D V V + L+ MY +CG L + +F + D + +++IS
Sbjct: 290 LAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTFLLSAMISA 349
Query: 303 YAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEP 362
Y +G G+K++++F +M + G P DVT + +L ACS++G +EG + FE M Y ++P
Sbjct: 350 YGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDCFELMTKTYGIQP 409
Query: 363 KTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKL 422
+HY C+VDLLGR+G +++A LI +MP PD +IW +LL AC+T D+AE AK++
Sbjct: 410 SVKHYTCVVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLSACKTQKNFDMAERIAKRV 469
Query: 423 LQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGR 482
++L+P ++ Y+LLSNI A+ R+ DV+E+RK MR NV K PG SW+E++ +H F
Sbjct: 470 IELDPHDSASYVLLSNIRATSRRWGDVSEVRKAMRDNNVRKEPGVSWVELKGHIHQFCTG 529
Query: 483 DCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGL 542
D SHP I LE++ +R+ GY PD S VLHD+++EEK SL +HSEKLA+A+
Sbjct: 530 D-ESHPRQKEIDECLEEMMAKIRQCGYSPDMSMVLHDMEDEEKEVSLSHHSEKLAIAFAF 588
Query: 543 VKLPEGVPIRVMKNLRVCGDCHSAIKLISK 572
+ LPEGVPIRVMKNLRVC DCH AIKL+S+
Sbjct: 589 LSLPEGVPIRVMKNLRVCDDCHLAIKLMSQ 618
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 87/253 (34%), Positives = 141/253 (55%), Gaps = 3/253 (1%)
Query: 136 MLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATW 195
+++ Y G + A ELF+ +P ++V++ N + G +NG++ AR +FD+M E++ ATW
Sbjct: 82 LMLAYADLGDLTAARELFERIPRRNVMSWNILFGGYIKNGDLGGARKLFDEMPERNVATW 141
Query: 196 SGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVR 255
+ M+ G++ E + LF M++EG+ + L SV CA L + GRQVHA +VR
Sbjct: 142 NAMVAGLTNLGFDEESLGLFLDMRREGMHPDEFGLGSVSRCCAGLRDVVTGRQVHAYVVR 201
Query: 256 CQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKV 315
D D+ V S L MY++CG L +G+ + S IV N+II+G Q G E +L+
Sbjct: 202 SGLDRDMCVGSSLAHMYMRCGCLQEGEAVLRMLPSLSIVSCNTIIAGRTQNGDSEGALEY 261
Query: 316 FHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIF-ESMKSKYLVEPKTEHYACMVDLL 374
F M S GV D VT V +S+CS + +G++I + MK+ V+ C+V +
Sbjct: 262 FCMMRSVGVAADVVTFVSAISSCSDLAALAQGQQIHGQVMKAG--VDKVVPVMTCLVHMY 319
Query: 375 GRAGQVEDAMKLI 387
R G + D+ ++
Sbjct: 320 SRCGCLGDSERVF 332
Score = 45.8 bits (107), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 40/194 (20%), Positives = 72/194 (37%), Gaps = 43/194 (22%)
Query: 233 VLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKD 292
+ C +L L RQ+HA D + A+ L+ Y G+L + +F+ ++
Sbjct: 50 LFRACRALRPL---RQLHAFAATSGAATDRFTANHLMLAYADLGDLTAARELFERIPRRN 106
Query: 293 IVMWNSIISGY-------------------------------AQYGLGEKSLKVFHEMFS 321
++ WN + GY G E+SL +F +M
Sbjct: 107 VMSWNILFGGYIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGLFLDMRR 166
Query: 322 SGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLG----RA 377
G+ PD+ L V C+ V GR++ Y+V + C+ L R
Sbjct: 167 EGMHPDEFGLGSVSRCCAGLRDVVTGRQVH-----AYVVRSGLDRDMCVGSSLAHMYMRC 221
Query: 378 GQVEDAMKLIEAMP 391
G +++ ++ +P
Sbjct: 222 GCLQEGEAVLRMLP 235
>gi|297816218|ref|XP_002875992.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321830|gb|EFH52251.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 721
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 230/674 (34%), Positives = 360/674 (53%), Gaps = 86/674 (12%)
Query: 12 MVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQ 71
V Y + G ++ A F E NV S+ V++ + +DS+I AR+LFD P+ D V+
Sbjct: 49 FVNLYSKCGCLSYARAAFDSTEEPNVFSYNVIVKAYAKDSKIHIARQLFDENPQPDTVSY 108
Query: 72 TNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN--NRIDVARKL-------- 121
++ GY +F M + +SG + +R+D+ ++L
Sbjct: 109 NTLISGYADARETVAAMVLFKRMRELGFEVDGFTLSGLIAACCDRVDLIKQLHCFAVSGG 168
Query: 122 FEVMPEKN----------------------------EVSWTAMLMGYTQCGRIQDAWELF 153
F+ N EVSW +M++ Y Q A L+
Sbjct: 169 FDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDGLRDEVSWNSMIVAYGQHKEGAKALALY 228
Query: 154 KAMPMK--------------SVVASNSMI-----------LGLGQNGEVQKARV------ 182
K M K ++ + + +I G QN V +
Sbjct: 229 KEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKC 288
Query: 183 -----------VFDQMREKDDATWSGMIKVYE-RKGYELEVIDLFTLMQKEGVRVNFPSL 230
VF ++ D W+ MI Y + + E + F MQ+ G R + S
Sbjct: 289 GGRDGMSDSEKVFQEILSPDLVLWNTMISGYSMNEEHSEEAVKSFRQMQRIGHRPDDCSF 348
Query: 231 ISVLSVCASLASLDHGRQVHAQLVRCQFDVD-VYVASVLITMYIKCGELVKGKLIFDNFA 289
+ V S C++L+S G+Q+H ++ + + V + LI++Y K G L+ + +FD
Sbjct: 349 VCVTSACSNLSSPSQGKQIHGLAIKSNIPSNRISVNNALISLYYKSGNLLDARRVFDRMP 408
Query: 290 SKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGRE 349
+ V +N +I GYAQ+G G ++L+++ M SG+ P+++T V +LSAC++ GKV EG++
Sbjct: 409 ELNAVSFNCMIKGYAQHGHGTEALRLYQRMLDSGIAPNNITFVAILSACAHCGKVDEGQK 468
Query: 350 IFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTH 409
F +MK + +EP+ EHY+CM+DLLGRAG++E+A + I+AMP++P ++ W +LLGACR H
Sbjct: 469 YFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKH 528
Query: 410 MKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSW 469
+ LAE AAK+L+ ++P A PY++L+N+YA G++ ++A +RK+MR + + K PGCSW
Sbjct: 529 KNMALAERAAKELMVMQPLAATPYVMLANMYADAGKWEEMASVRKSMRGKRIRKKPGCSW 588
Query: 470 IEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVL---HDVDEEEKV 526
IEV+KK H+F D SHP + LE++ +++ GY D + + + E E+
Sbjct: 589 IEVKKKKHVFVAEDW-SHPMIREVNEYLEEMMKKMKKVGYVMDKKWAMVKEDEAGEGEEE 647
Query: 527 HSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRF 586
L +HSEKLAVA+GL+ +G I V+KNLR+CGDCH+AIK +S V GREII+RD RF
Sbjct: 648 MRLGHHSEKLAVAFGLMSTRDGEEIVVVKNLRICGDCHNAIKFMSAVAGREIIVRDNLRF 707
Query: 587 HHFKDGLCSCRDYW 600
H FKDG CSC DYW
Sbjct: 708 HCFKDGKCSCGDYW 721
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 73/148 (49%), Gaps = 12/148 (8%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
+P + A++ Y + G + +A +F +MPE N VS+ M+ G+ + +A RL+
Sbjct: 376 IPSNRISVNNALISLYYKSGNLLDARRVFDRMPELNAVSFNCMIKGYAQHGHGTEALRLY 435
Query: 61 DMMPEKDVVAQTNM----VLGYCQD-GRVDEGREIFDEMPKKNVIS-----WTTMISGYV 110
M + +A N+ +L C G+VDEG++ F+ M + I ++ MI
Sbjct: 436 QRMLDSG-IAPNNITFVAILSACAHCGKVDEGQKYFNTMKETFKIEPEAEHYSCMIDLLG 494
Query: 111 NNNRIDVARKLFEVMPEK-NEVSWTAML 137
+++ A + + MP K V+W A+L
Sbjct: 495 RAGKLEEAERFIDAMPYKPGSVAWAALL 522
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/129 (20%), Positives = 57/129 (44%), Gaps = 4/129 (3%)
Query: 227 FPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFD 286
F S +L + L G+ +HA V+ Y+++ + +Y KCG L + FD
Sbjct: 8 FKSFRDLLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGCLSYARAAFD 67
Query: 287 NFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKE 346
+ ++ +N I+ YA+ + + + ++F PD V+ ++S + +
Sbjct: 68 STEEPNVFSYNVIVKAYAK----DSKIHIARQLFDENPQPDTVSYNTLISGYADARETVA 123
Query: 347 GREIFESMK 355
+F+ M+
Sbjct: 124 AMVLFKRMR 132
>gi|15232648|ref|NP_190263.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207666|sp|Q9STF3.1|PP265_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g46790, chloroplastic; AltName: Full=Protein
CHLORORESPIRATORY REDUCTION 2; Flags: Precursor
gi|5541680|emb|CAB51186.1| putative protein [Arabidopsis thaliana]
gi|110741961|dbj|BAE98921.1| hypothetical protein [Arabidopsis thaliana]
gi|332644684|gb|AEE78205.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 657
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 215/612 (35%), Positives = 348/612 (56%), Gaps = 19/612 (3%)
Query: 7 VSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDA----RRLFDM 62
+S +++ +EG + +A + Q + ++ +++ S + DA R + D
Sbjct: 47 ISNNQLIQSLCKEGKLKQAIRVLSQESSPSQQTYELLILCCGHRSSLSDALRVHRHILDN 106
Query: 63 MPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYV----NNNRIDVA 118
++D T ++ Y G VD R++FD+ K+ + W + + +
Sbjct: 107 GSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLY 166
Query: 119 RKLFEVMPEKNEVSWTAMLMG--YTQC--GRIQDAWELFKAMPMKS----VVASNSMILG 170
K+ + E + ++T +L ++C + E+ + + V +++
Sbjct: 167 WKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDM 226
Query: 171 LGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEG--VRVNFP 228
+ G V A VF M ++ +WS MI Y + G E + F M +E N
Sbjct: 227 YARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSV 286
Query: 229 SLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNF 288
+++SVL CASLA+L+ G+ +H ++R D + V S L+TMY +CG+L G+ +FD
Sbjct: 287 TMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRM 346
Query: 289 ASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGR 348
+D+V WNS+IS Y +G G+K++++F EM ++G P VT V VL ACS+ G V+EG+
Sbjct: 347 HDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGK 406
Query: 349 EIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRT 408
+FE+M + ++P+ EHYACMVDLLGRA ++++A K+++ M EP +WGSLLG+CR
Sbjct: 407 RLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRI 466
Query: 409 HMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCS 468
H ++LAE A+++L LEPKNAG Y+LL++IYA + +V ++K + R + K PG
Sbjct: 467 HGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRC 526
Query: 469 WIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHS 528
W+EV +K++ F D + P I L K+ ++E GY P + VL++++ EEK
Sbjct: 527 WMEVRRKMYSFVSVDEFN-PLMEQIHAFLVKLAEDMKEKGYIPQTKGVLYELETEEKERI 585
Query: 529 LRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHH 588
+ HSEKLA+A+GL+ +G PIR+ KNLR+C DCH K ISK M +EI++RD NRFH
Sbjct: 586 VLGHSEKLALAFGLINTSKGEPIRITKNLRLCEDCHLFTKFISKFMEKEILVRDVNRFHR 645
Query: 589 FKDGLCSCRDYW 600
FK+G+CSC DYW
Sbjct: 646 FKNGVCSCGDYW 657
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 124/276 (44%), Gaps = 24/276 (8%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMP----EKNVVSWTVMLGGFIRD----SRID 54
+R + W A+ R G E L+W+M E + ++T +L + + +
Sbjct: 140 KRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLM 199
Query: 55 DARRLFDMMPEK----DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYV 110
+ + + + V T +V Y + G VD +F MP +NV+SW+ MI+ Y
Sbjct: 200 KGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYA 259
Query: 111 NNNR-IDVARKLFEVMPEK-----NEVSWTAML-----MGYTQCGRIQDAWELFKAMPMK 159
N + + R E+M E N V+ ++L + + G++ + L + +
Sbjct: 260 KNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSI 319
Query: 160 SVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQ 219
V S +++ G+ G+++ + VFD+M ++D +W+ +I Y GY + I +F M
Sbjct: 320 LPVIS-ALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEML 378
Query: 220 KEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVR 255
G + +SVL C+ ++ G+++ + R
Sbjct: 379 ANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWR 414
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 82/175 (46%), Gaps = 24/175 (13%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM------PEKNVVSWTVMLGGFIRDSRID 54
MP RNVVSW+AM+ Y + G EA F +M N V+ +L + ++
Sbjct: 243 MPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALE 302
Query: 55 DA---------RRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTM 105
R L ++P V++ + G C G+++ G+ +FD M ++V+SW ++
Sbjct: 303 QGKLIHGYILRRGLDSILP---VISALVTMYGRC--GKLEVGQRVFDRMHDRDVVSWNSL 357
Query: 106 ISGYVNNNRIDVARKLFEVM----PEKNEVSWTAMLMGYTQCGRIQDAWELFKAM 156
IS Y + A ++FE M V++ ++L + G +++ LF+ M
Sbjct: 358 ISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETM 412
>gi|302767396|ref|XP_002967118.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
gi|300165109|gb|EFJ31717.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
Length = 903
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 234/653 (35%), Positives = 349/653 (53%), Gaps = 61/653 (9%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDM 62
E+ +V TA+ Y G + +A +F + E++VVSW MLG + + + +A LF
Sbjct: 257 EQTLVVSTALASAYARLGHLDQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFAR 316
Query: 63 MPEKDV----VAQTNMVLGYCQDGRVDEGREI----FDEMPKKNVISWTTMISGYVNNNR 114
M + + V N G C R GR I ++ ++++ ++ Y
Sbjct: 317 MLHEGIPPSKVTLVNASTG-CSSLRF--GRMIHACALEKGLDRDIVLGNALLDMYTRCGS 373
Query: 115 IDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSV------------- 161
+ AR LFE +P N VSW M+ G +Q G+++ A ELF+ M ++ +
Sbjct: 374 PEEARHLFEGIP-GNAVSWNTMIAGSSQKGQMKRALELFQRMQLEGMAPVRATYLNLLEA 432
Query: 162 VASN--------------SMILGLG----------------QNGEVQKARVVFDQ--MRE 189
VASN S I+ G G + +A F + M +
Sbjct: 433 VASNPEEARAMAEGRKLHSRIVSCGYASEPAIGTAVVKMYASCGAIDEAAASFQRGAMED 492
Query: 190 KDDA-TWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQ 248
+ D +W+ +I + G+ + F M GV N + ++VL CA A+L G
Sbjct: 493 RHDVVSWNAIISSLSQHGHGKRALGFFRRMDLHGVAPNQITCVAVLDACAGAAALTEGVI 552
Query: 249 VHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFA-SKDIVMWNSIISGYAQYG 307
VH L + +V+VA+ L +MY +CG L + IF+ A +D+V++N++I+ Y+Q G
Sbjct: 553 VHDHLRHSGMESNVFVATALASMYGRCGSLESAREIFEKVAVERDVVIFNAMIAAYSQNG 612
Query: 308 LGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHY 367
L ++LK+F M G PD+ + V VLSACS+ G EG EIF SM+ Y + P +HY
Sbjct: 613 LAGEALKLFWRMQQEGSRPDEQSFVSVLSACSHGGLADEGWEIFRSMRQSYGIAPSEDHY 672
Query: 368 ACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEP 427
AC VD+LGRAG + DA +LI M +P ++W +LLGACR + +D +A + +L+P
Sbjct: 673 ACAVDVLGRAGWLADAEELIRCMDVKPTVLVWKTLLGACRKYRDVDRGRLANSMVRELDP 732
Query: 428 KNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSH 487
+ Y++LSNI A G++ + AE+R M R + K G SWIE++ +VH F D SH
Sbjct: 733 GDESAYVVLSNILAGAGKWDEAAEVRTEMESRGLRKQAGKSWIEIKSRVHEFVAGD-RSH 791
Query: 488 PEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPE 547
P I R LE++ +RE GY PD+ VL VDE EK L HSE+LA+A G++
Sbjct: 792 PRSEEIYRELERLHAEIREIGYVPDTRLVLRKVDEAEKERLLCQHSERLAIALGVMSSST 851
Query: 548 GVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
+RVMKNLRVC DCH+A K ISK++ +EI++RD +RFHHF DG CSC DYW
Sbjct: 852 DT-VRVMKNLRVCEDCHNATKFISKIVNKEIVVRDTHRFHHFVDGSCSCGDYW 903
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 123/487 (25%), Positives = 236/487 (48%), Gaps = 32/487 (6%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQM------PEKNVVSWTVMLGGFIRDSR-IDD 55
ER++VSW A + + G + A LF +M P + + T+ + IR +R I
Sbjct: 190 ERDLVSWNAAIAANAQSGDLDMALELFQRMQLEGVRPARITLVITLSVCAKIRQARAIHS 249
Query: 56 ARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRI 115
R + E+ +V T + Y + G +D+ +E+FD +++V+SW M+ Y + +
Sbjct: 250 IVRESGL--EQTLVVSTALASAYARLGHLDQAKEVFDRAAERDVVSWNAMLGAYAQHGHM 307
Query: 116 DVARKLF-EVMPEKNEVSWTAMLMGYTQC-----GRIQDAWELFKAMPMKSVVASNSMIL 169
A LF ++ E S ++ T C GR+ A L K + + +V N+++
Sbjct: 308 SEAALLFARMLHEGIPPSKVTLVNASTGCSSLRFGRMIHACALEKGLD-RDIVLGNALLD 366
Query: 170 GLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEG---VRVN 226
+ G ++AR +F+ + + +W+ MI +KG ++LF MQ EG VR
Sbjct: 367 MYTRCGSPEEARHLFEGI-PGNAVSWNTMIAGSSQKGQMKRALELFQRMQLEGMAPVRAT 425
Query: 227 FPSLI-SVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIF 285
+ +L+ +V S ++ GR++H+++V C + + + + ++ MY CG + + F
Sbjct: 426 YLNLLEAVASNPEEARAMAEGRKLHSRIVSCGYASEPAIGTAVVKMYASCGAIDEAAASF 485
Query: 286 DNFA---SKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTG 342
A D+V WN+IIS +Q+G G+++L F M GV P+ +T V VL AC+
Sbjct: 486 QRGAMEDRHDVVSWNAIISSLSQHGHGKRALGFFRRMDLHGVAPNQITCVAVLDACAGAA 545
Query: 343 KVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSL 402
+ EG + + ++ + E + + GR G +E A ++ E + E D +I+ ++
Sbjct: 546 ALTEGVIVHDHLRHSGM-ESNVFVATALASMYGRCGSLESAREIFEKVAVERDVVIFNAM 604
Query: 403 LGACRTHMKLDLAEVAAKKLLQLEPKNAGP----YILLSNIYASQGRFHDVAELRKNMRK 458
+ A + + LA A K +++ + + P ++ + + + G + E+ ++MR+
Sbjct: 605 IAA---YSQNGLAGEALKLFWRMQQEGSRPDEQSFVSVLSACSHGGLADEGWEIFRSMRQ 661
Query: 459 RNVIKPP 465
I P
Sbjct: 662 SYGIAPS 668
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 106/377 (28%), Positives = 181/377 (48%), Gaps = 22/377 (5%)
Query: 89 EIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEK----NEVSWTAML-----MG 139
E+F + ++ SWTT+I+ Y + + A +F M ++ + V++ A+L +G
Sbjct: 83 EVFSRLEVRDEASWTTIITAYTEHGQAKRAIWMFHRMQQEGVRCDAVTFLAVLKACARLG 142
Query: 140 YTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMI 199
GR AW + + KSV+A N ++ G G V A ++F++M E+D +W+ I
Sbjct: 143 DLSQGRSIHAWIVESGLEGKSVLA-NLLLHIYGSCGCVASAMLLFERM-ERDLVSWNAAI 200
Query: 200 KVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFD 259
+ G ++LF MQ EGVR +L+ LSVCA + R +H+ + +
Sbjct: 201 AANAQSGDLDMALELFQRMQLEGVRPARITLVITLSVCAKI---RQARAIHSIVRESGLE 257
Query: 260 VDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEM 319
+ V++ L + Y + G L + K +FD A +D+V WN+++ YAQ+G ++ +F M
Sbjct: 258 QTLVVSTALASAYARLGHLDQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARM 317
Query: 320 FSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQ 379
G+ P VTLV + CS ++ GR I K L A ++D+ R G
Sbjct: 318 LHEGIPPSKVTLVNASTGCS---SLRFGRMIHACALEKGLDRDIVLGNA-LLDMYTRCGS 373
Query: 380 VEDAMKLIEAMPFEPDAIIWGSLLGAC--RTHMKLDLAEVAAKKLLQLEPKNAGPYILLS 437
E+A L E +P +A+ W +++ + MK L +L + P A LL
Sbjct: 374 PEEARHLFEGIP--GNAVSWNTMIAGSSQKGQMKRALELFQRMQLEGMAPVRATYLNLLE 431
Query: 438 NIYASQGRFHDVAELRK 454
+ ++ +AE RK
Sbjct: 432 AVASNPEEARAMAEGRK 448
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 100/426 (23%), Positives = 204/426 (47%), Gaps = 27/426 (6%)
Query: 4 RNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV----VSWTVMLGGFIRDSRIDDARRL 59
R+ SWT ++ Y E G A +F +M ++ V V++ +L R + R +
Sbjct: 91 RDEASWTTIITAYTEHGQAKRAIWMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSI 150
Query: 60 FDMMPEKDVVAQT---NMVLG-YCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRI 115
+ E + ++ N++L Y G V +F+ M +++++SW I+ + +
Sbjct: 151 HAWIVESGLEGKSVLANLLLHIYGSCGCVASAMLLFERM-ERDLVSWNAAIAANAQSGDL 209
Query: 116 DVARKLFEVMP-EKNEVSWTAMLMGYTQCGRIQDAWELFKAMP----MKSVVASNSMILG 170
D+A +LF+ M E + +++ + C +I+ A + + +++V S ++
Sbjct: 210 DMALELFQRMQLEGVRPARITLVITLSVCAKIRQARAIHSIVRESGLEQTLVVSTALASA 269
Query: 171 LGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSL 230
+ G + +A+ VFD+ E+D +W+ M+ Y + G+ E LF M EG+ PS
Sbjct: 270 YARLGHLDQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGIP---PSK 326
Query: 231 ISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFAS 290
+++++ +SL GR +HA + D D+ + + L+ MY +CG + + +F+
Sbjct: 327 VTLVNASTGCSSLRFGRMIHACALEKGLDRDIVLGNALLDMYTRCGSPEEARHLFEGIPG 386
Query: 291 KDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGK----VKE 346
+ V WN++I+G +Q G +++L++F M G+ P T + +L A + + + E
Sbjct: 387 -NAVSWNTMIAGSSQKGQMKRALELFQRMQLEGMAPVRATYLNLLEAVASNPEEARAMAE 445
Query: 347 GREIFESMKS-KYLVEPKTEHYACMVDLLGRAGQVEDAMKLIE--AMPFEPDAIIWGSLL 403
GR++ + S Y EP +V + G +++A + AM D + W +++
Sbjct: 446 GRKLHSRIVSCGYASEPAIG--TAVVKMYASCGAIDEAAASFQRGAMEDRHDVVSWNAII 503
Query: 404 GACRTH 409
+ H
Sbjct: 504 SSLSQH 509
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 90/177 (50%), Gaps = 13/177 (7%)
Query: 243 LDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISG 302
L GR++HA++V ++ + + L+ +Y+KC L + +F +D W +II+
Sbjct: 45 LSQGRRIHARIV--SLGLEEELGNHLLRLYLKCESLGDVEEVFSRLEVRDEASWTTIITA 102
Query: 303 YAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEP 362
Y ++G ++++ +FH M GV D VT + VL AC+ G + +GR I ++VE
Sbjct: 103 YTEHGQAKRAIWMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSIH-----AWIVES 157
Query: 363 KTEHYACMVDLL----GRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLA 415
E + + +LL G G V AM L E M E D + W + + A LD+A
Sbjct: 158 GLEGKSVLANLLLHIYGSCGCVASAMLLFERM--ERDLVSWNAAIAANAQSGDLDMA 212
>gi|242092564|ref|XP_002436772.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
gi|241914995|gb|EER88139.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
Length = 825
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 238/717 (33%), Positives = 357/717 (49%), Gaps = 118/717 (16%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMP----EKNVVSWTVML------------ 44
MPERN+VS+ +V+GY G EA LF ++ E N T +L
Sbjct: 110 MPERNMVSFVTLVQGYALRGGFEEAAGLFRRLQREGHEVNHFVLTTILKVLVAMDAPGLT 169
Query: 45 --------------GGFIRDSRID---------DARRLFDMMPEKDVVAQTNMVLGYCQD 81
F+ S ID AR +FD + KD V T MV Y ++
Sbjct: 170 CCIHACACKLGHDRNAFVGSSLIDAYSLCGAVSHARCVFDGIIWKDAVTWTAMVSCYSEN 229
Query: 82 GRVDEGREIFDEM----PKKNVISWTTMISG----------------------------- 108
++ F +M K N T+++
Sbjct: 230 DIPEDALNTFSKMRMAGAKPNPFVLTSVLKAAVCLSSAVLGKGIHGCAVKTLCDTEPHVG 289
Query: 109 ------YVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVV 162
Y I+ AR +FE++P + + W+ ++ Y Q + + A+E+F M SVV
Sbjct: 290 GALLDMYAKCGYIEDARTVFEIIPHDDVILWSFLISRYAQSYQNEQAFEMFLRMMRSSVV 349
Query: 163 ------------ASNSMILGLGQN---------------------------GEVQKARVV 183
+N L LGQ ++ + +
Sbjct: 350 PNEFSLSGVLQACANVAFLDLGQQIHNLVIKLGYESELFVGNALMDVYAKCRNMENSLEI 409
Query: 184 FDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASL 243
F +R+ ++ +W+ +I Y + G+ + + +F M+ V + SVL CA+ AS+
Sbjct: 410 FRSLRDANEVSWNTIIVGYCQSGFAEDALSVFQEMRAAHVLSTQVTFSSVLRACANTASI 469
Query: 244 DHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGY 303
H Q+H+ + + F+ D V + LI Y KCG + +F++ D+V WN+IISGY
Sbjct: 470 KHTVQIHSLIEKSTFNNDTIVCNSLIDTYAKCGCIRDALKVFESIIQCDVVSWNAIISGY 529
Query: 304 AQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPK 363
A +G +L++F+ M S P+DVT V +LS C TG V +G +F SM + ++P
Sbjct: 530 ALHGRATDALELFNRMNKSDTKPNDVTFVALLSVCGSTGLVNQGLSLFNSMTMDHRIKPS 589
Query: 364 TEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLL 423
+HY C+V LLGRAG++ DA+K I +P P ++W +LL +C H + L + +A+K+L
Sbjct: 590 MDHYTCIVRLLGRAGRLNDALKFIGDIPSTPSPMVWRALLSSCVVHKNVALGKFSAEKVL 649
Query: 424 QLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRD 483
++EP++ Y+LLSN+YA+ G VA LRK+MR V K G SW+E++ +VH F+
Sbjct: 650 EIEPQDETTYVLLSNMYAAAGILDQVALLRKSMRNIGVKKEVGLSWVEIKGEVHAFS-VG 708
Query: 484 CVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLV 543
HP+ +I MLE + GY PD + VLHDVDEEEK L HSE+LA+AYGL
Sbjct: 709 SADHPDMRIINAMLEWLNLKASREGYVPDINVVLHDVDEEEKARMLWVHSERLALAYGLS 768
Query: 544 KLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
P G PIR+MKNLR C DCH+ K+ISK++ REI++RD NRFHHF +G+CSC DYW
Sbjct: 769 MTPPGHPIRIMKNLRSCLDCHTVFKVISKIVQREIVVRDINRFHHFDEGICSCGDYW 825
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 123/503 (24%), Positives = 216/503 (42%), Gaps = 81/503 (16%)
Query: 41 TVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPK---- 96
V+L + + + ARRLFD MPE+++V+ +V GY G +E +F + +
Sbjct: 88 NVLLNLYAKLGPLAAARRLFDGMPERNMVSFVTLVQGYALRGGFEEAAGLFRRLQREGHE 147
Query: 97 -----------------------------------KNVISWTTMISGYVNNNRIDVARKL 121
+N +++I Y + AR +
Sbjct: 148 VNHFVLTTILKVLVAMDAPGLTCCIHACACKLGHDRNAFVGSSLIDAYSLCGAVSHARCV 207
Query: 122 FEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPM--------------KSVVASNSM 167
F+ + K+ V+WTAM+ Y++ +DA F M M K+ V +S
Sbjct: 208 FDGIIWKDAVTWTAMVSCYSENDIPEDALNTFSKMRMAGAKPNPFVLTSVLKAAVCLSSA 267
Query: 168 ILGLG-------------------------QNGEVQKARVVFDQMREKDDATWSGMIKVY 202
+LG G + G ++ AR VF+ + D WS +I Y
Sbjct: 268 VLGKGIHGCAVKTLCDTEPHVGGALLDMYAKCGYIEDARTVFEIIPHDDVILWSFLISRY 327
Query: 203 ERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDV 262
+ + ++F M + V N SL VL CA++A LD G+Q+H +++ ++ ++
Sbjct: 328 AQSYQNEQAFEMFLRMMRSSVVPNEFSLSGVLQACANVAFLDLGQQIHNLVIKLGYESEL 387
Query: 263 YVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSS 322
+V + L+ +Y KC + IF + + V WN+II GY Q G E +L VF EM ++
Sbjct: 388 FVGNALMDVYAKCRNMENSLEIFRSLRDANEVSWNTIIVGYCQSGFAEDALSVFQEMRAA 447
Query: 323 GVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVED 382
V+ VT VL AC+ T +K +I S+ K T ++D + G + D
Sbjct: 448 HVLSTQVTFSSVLRACANTASIKHTVQI-HSLIEKSTFNNDTIVCNSLIDTYAKCGCIRD 506
Query: 383 AMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPK-NAGPYILLSNIYA 441
A+K+ E++ + D + W +++ H + A ++ + + K N ++ L ++
Sbjct: 507 ALKVFESI-IQCDVVSWNAIISGYALHGRATDALELFNRMNKSDTKPNDVTFVALLSVCG 565
Query: 442 SQGRFHDVAELRKNMRKRNVIKP 464
S G + L +M + IKP
Sbjct: 566 STGLVNQGLSLFNSMTMDHRIKP 588
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 93/401 (23%), Positives = 180/401 (44%), Gaps = 48/401 (11%)
Query: 63 MPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKK------NVISWTTMISGYVNNNRID 116
+P+ D A ++ G GR + + ++ + +++ Y +
Sbjct: 42 LPKLDSYACARLLQRCIARGDARAGRAVHARVVQRGGVAQLDTFCANVLLNLYAKLGPLA 101
Query: 117 VARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMP--------------MKSVV 162
AR+LF+ MPE+N VS+ ++ GY G ++A LF+ + +K +V
Sbjct: 102 AARRLFDGMPERNMVSFVTLVQGYALRGGFEEAAGLFRRLQREGHEVNHFVLTTILKVLV 161
Query: 163 A-------------------------SNSMILGLGQNGEVQKARVVFDQMREKDDATWSG 197
A +S+I G V AR VFD + KD TW+
Sbjct: 162 AMDAPGLTCCIHACACKLGHDRNAFVGSSLIDAYSLCGAVSHARCVFDGIIWKDAVTWTA 221
Query: 198 MIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQ 257
M+ Y + ++ F+ M+ G + N L SVL L+S G+ +H V+
Sbjct: 222 MVSCYSENDIPEDALNTFSKMRMAGAKPNPFVLTSVLKAAVCLSSAVLGKGIHGCAVKTL 281
Query: 258 FDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFH 317
D + +V L+ MY KCG + + +F+ D+++W+ +IS YAQ E++ ++F
Sbjct: 282 CDTEPHVGGALLDMYAKCGYIEDARTVFEIIPHDDVILWSFLISRYAQSYQNEQAFEMFL 341
Query: 318 EMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRA 377
M S V+P++ +L GVL AC+ + G++I ++ K E + ++D+ +
Sbjct: 342 RMMRSSVVPNEFSLSGVLQACANVAFLDLGQQI-HNLVIKLGYESELFVGNALMDVYAKC 400
Query: 378 GQVEDAMKLIEAMPFEPDAIIWGSLL-GACRTHMKLDLAEV 417
+E+++++ ++ + + + W +++ G C++ D V
Sbjct: 401 RNMENSLEIFRSLR-DANEVSWNTIIVGYCQSGFAEDALSV 440
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 98/255 (38%), Gaps = 42/255 (16%)
Query: 233 VLSVCASLASLDHGRQVHAQLVR--CQFDVDVYVASVLITMYIKCGELVKGKLIFDNFAS 290
+L C + GR VHA++V+ +D + A+VL+ +Y K G L + +FD
Sbjct: 53 LLQRCIARGDARAGRAVHARVVQRGGVAQLDTFCANVLLNLYAKLGPLAAARRLFDGMPE 112
Query: 291 KDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGV-----------LSACS 339
+++V + +++ GYA G E++ +F + G + L + L+ C
Sbjct: 113 RNMVSFVTLVQGYALRGGFEEAAGLFRRLQREGHEVNHFVLTTILKVLVAMDAPGLTCCI 172
Query: 340 YTGKVKEGRE----IFESMKSKYLVEPKTEHYAC---------------MVDLLGRAGQV 380
+ K G + + S+ Y + H C MV
Sbjct: 173 HACACKLGHDRNAFVGSSLIDAYSLCGAVSHARCVFDGIIWKDAVTWTAMVSCYSENDIP 232
Query: 381 EDAMKLIEAMPF---EPDAIIWGSLLGA--CRTHMKL--DLAEVAAKKLLQLEPKNAGPY 433
EDA+ M +P+ + S+L A C + L + A K L EP G
Sbjct: 233 EDALNTFSKMRMAGAKPNPFVLTSVLKAAVCLSSAVLGKGIHGCAVKTLCDTEPHVGGA- 291
Query: 434 ILLSNIYASQGRFHD 448
L ++YA G D
Sbjct: 292 --LLDMYAKCGYIED 304
>gi|242082165|ref|XP_002445851.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
gi|241942201|gb|EES15346.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
Length = 1084
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 219/638 (34%), Positives = 341/638 (53%), Gaps = 49/638 (7%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMM----PE 65
A++ Y + MI A +F +MP ++ +SW ++ G + +A LF M E
Sbjct: 449 NALISFYAKSNMIDNAVLVFDRMPHQDTISWNSVISGCTSNGLNSEAIELFVRMWMQGHE 508
Query: 66 KDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISG----YVNNNRIDVARKL 121
D +++ + GR + K +I T++ + Y N + ++
Sbjct: 509 LDSTTLLSVLPACARSHYWFVGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWHSTNQI 568
Query: 122 FEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKS----VVASNSMILGLG----- 172
F M +KN VSWTAM+ YT+ G L + M + V A S++ G
Sbjct: 569 FRNMAQKNVVSWTAMITSYTRAGLFDKVAGLLQEMVLDGIKPDVFAVTSVLHGFAGDESL 628
Query: 173 -----------QNG-------------------EVQKARVVFDQMREKDDATWSGMIKVY 202
+NG +++AR+VFD + KD +W+ +I Y
Sbjct: 629 KQGKSVHGYAIRNGMEKLLPVANALMEMYVNCRNMEEARLVFDHVTNKDIISWNTLIGGY 688
Query: 203 ERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDV 262
R + E LF+ M + + N ++ +L AS++SL+ GR++HA +R F D
Sbjct: 689 SRNNFANESFSLFSDMLLQ-FKPNTVTMTCILPAVASISSLERGREIHAYALRRGFLEDS 747
Query: 263 YVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSS 322
Y ++ L+ MY+KCG L+ +++FD K+++ W +I+GY +G G+ ++ +F +M S
Sbjct: 748 YTSNALVDMYVKCGALLVARVLFDRLTKKNLISWTIMIAGYGMHGCGKDAVALFEQMRGS 807
Query: 323 GVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVED 382
GV PD + +L AC ++G EG + F +M+ +Y +EPK +HY C+VDLL G +++
Sbjct: 808 GVEPDTASFSAILYACCHSGLTAEGWKFFNAMRKEYKIEPKLKHYTCIVDLLSHTGNLKE 867
Query: 383 AMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYAS 442
A + IE+MP EPD+ IW SLL CR H + LAE A ++ +LEP+N G Y+LL+NIYA
Sbjct: 868 AFEFIESMPIEPDSSIWVSLLHGCRIHRDVKLAEKVADRVFKLEPENTGYYVLLANIYAE 927
Query: 443 QGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGG 502
R+ V +L+ + R + + GCSWIEV KVH+F D +HPE I L+ +
Sbjct: 928 AERWEAVKKLKNKIGGRGLRENTGCSWIEVRGKVHVFIA-DNRNHPEWNRIAEFLDHVAR 986
Query: 503 LLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGD 562
+RE G+ P + L ++ +L HS KLAV +G++ LPEG PIRV KN +VC
Sbjct: 987 RMREEGHDPKKKYSLMGANDAVHDEALCGHSSKLAVTFGVLHLPEGRPIRVTKNSKVCSH 1046
Query: 563 CHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
CH A K ISK+ REIILRD++RFHHF+ G CSCR ++
Sbjct: 1047 CHEAAKFISKMCNREIILRDSSRFHHFEGGRCSCRGHF 1084
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 114/458 (24%), Positives = 202/458 (44%), Gaps = 82/458 (17%)
Query: 74 MVLGYCQDGRVDEGREIFDEMPKK--NVISWTTMISGYVNNNRIDVARKLFEVM------ 125
+VL Y + G + R +FDEMP + +V WT+++S Y LF M
Sbjct: 136 LVLAYLKCGDLGGARMVFDEMPPRVADVRVWTSLMSAYAKAGDFQEGVSLFRQMQCCGVS 195
Query: 126 PEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMK-----SVVASNSMILGLGQNGEVQKA 180
P+ + VS +L G I + E+ + K + +N++I + G ++ A
Sbjct: 196 PDAHAVS--CVLKCIASLGSITEG-EVIHGLLEKLGLGEACAVANALIALYSRCGCMEDA 252
Query: 181 RVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASL 240
VFD M +D +W+ I Y G+ +DLF+ M EG ++ +++SVL CA L
Sbjct: 253 MQVFDSMHARDAISWNSTISGYFSNGWHDRAVDLFSKMWSEGTEISSVTVLSVLPACAEL 312
Query: 241 ASLDHGRQVHA---------QLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASK 291
G+ VH L Q +D + S L+ MY+KCG++ + +FD SK
Sbjct: 313 GFELVGKVVHGYSMKSGLLWDLESVQSGIDEALGSKLVFMYVKCGDMGSARRVFDAMPSK 372
Query: 292 -DIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLS-----ACSYTGKVK 345
++ +WN I+ GYA+ E+SL +F +M G+ PD+ L +L +C+ G V
Sbjct: 373 GNVHVWNLIMGGYAKAAEFEESLLLFEQMHELGITPDEHALSCLLKCITCLSCARDGLVA 432
Query: 346 EGREIFESMKSKYLVEP--KTEHYAC--MVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGS 401
G YLV+ T+ C ++ ++ +++A+ + + MP + D I W S
Sbjct: 433 HG----------YLVKLGFGTQCAVCNALISFYAKSNMIDNAVLVFDRMPHQ-DTISWNS 481
Query: 402 LLGACRTH------------MKLDLAEVAAKKLLQLEPKNAGPYI--------------- 434
++ C ++ M + E+ + LL + P A +
Sbjct: 482 VISGCTSNGLNSEAIELFVRMWMQGHELDSTTLLSVLPACARSHYWFVGRVVHGYSVKTG 541
Query: 435 ---------LLSNIYASQGRFHDVAELRKNMRKRNVIK 463
L ++Y++ +H ++ +NM ++NV+
Sbjct: 542 LIGETSLANALLDMYSNCSDWHSTNQIFRNMAQKNVVS 579
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 111/456 (24%), Positives = 194/456 (42%), Gaps = 29/456 (6%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKN--VVSWTVM------------LGG 46
M R+ +SW + + GY G A LF +M + + S TV+ L G
Sbjct: 259 MHARDAISWNSTISGYFSNGWHDRAVDLFSKMWSEGTEISSVTVLSVLPACAELGFELVG 318
Query: 47 FIRDSRIDDARRLFDMMPEK---DVVAQTNMVLGYCQDGRVDEGREIFDEMPKK-NVISW 102
+ + L+D+ + D + +V Y + G + R +FD MP K NV W
Sbjct: 319 KVVHGYSMKSGLLWDLESVQSGIDEALGSKLVFMYVKCGDMGSARRVFDAMPSKGNVHVW 378
Query: 103 TTMISGYVNNNRIDVARKLFEVM------PEKNEVSWTAMLMGYTQCGR--IQDAWELFK 154
++ GY + + LFE M P+++ +S + C R + L K
Sbjct: 379 NLIMGGYAKAAEFEESLLLFEQMHELGITPDEHALSCLLKCITCLSCARDGLVAHGYLVK 438
Query: 155 AMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDL 214
N++I ++ + A +VFD+M +D +W+ +I G E I+L
Sbjct: 439 LGFGTQCAVCNALISFYAKSNMIDNAVLVFDRMPHQDTISWNSVISGCTSNGLNSEAIEL 498
Query: 215 FTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIK 274
F M +G ++ +L+SVL CA GR VH V+ + +A+ L+ MY
Sbjct: 499 FVRMWMQGHELDSTTLLSVLPACARSHYWFVGRVVHGYSVKTGLIGETSLANALLDMYSN 558
Query: 275 CGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGV 334
C + IF N A K++V W ++I+ Y + GL +K + EM G+ PD + V
Sbjct: 559 CSDWHSTNQIFRNMAQKNVVSWTAMITSYTRAGLFDKVAGLLQEMVLDGIKPDVFAVTSV 618
Query: 335 LSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEP 394
L + +K+G+ + + +E ++++ +E+A +L+
Sbjct: 619 LHGFAGDESLKQGKSV-HGYAIRNGMEKLLPVANALMEMYVNCRNMEEA-RLVFDHVTNK 676
Query: 395 DAIIWGSLLGA-CRTHMKLDLAEVAAKKLLQLEPKN 429
D I W +L+G R + + + + LLQ +P
Sbjct: 677 DIISWNTLIGGYSRNNFANESFSLFSDMLLQFKPNT 712
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 101/386 (26%), Positives = 169/386 (43%), Gaps = 39/386 (10%)
Query: 1 MPER--NVVSWTAMVRGYVEEGMITEAGTLFWQM------PEKNVVSWTV----MLGGFI 48
MP R +V WT+++ Y + G E +LF QM P+ + VS + LG
Sbjct: 156 MPPRVADVRVWTSLMSAYAKAGDFQEGVSLFRQMQCCGVSPDAHAVSCVLKCIASLGSIT 215
Query: 49 RDSRIDDARRLFDMMPEKDVVAQTNMVLG-YCQDGRVDEGREIFDEMPKKNVISWTTMIS 107
I L + + + A N ++ Y + G +++ ++FD M ++ ISW + IS
Sbjct: 216 EGEVIHG---LLEKLGLGEACAVANALIALYSRCGCMEDAMQVFDSMHARDAISWNSTIS 272
Query: 108 GYVNNNRIDVARKLFEVM-PEKNEVSWTAML--------MGYTQCGRIQDA--------W 150
GY +N D A LF M E E+S +L +G+ G++ W
Sbjct: 273 GYFSNGWHDRAVDLFSKMWSEGTEISSVTVLSVLPACAELGFELVGKVVHGYSMKSGLLW 332
Query: 151 ELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDA-TWSGMIKVYERKGYEL 209
+L + ++ + G++ AR VFD M K + W+ ++ Y +
Sbjct: 333 DLESVQSGIDEALGSKLVFMYVKCGDMGSARRVFDAMPSKGNVHVWNLIMGGYAKAAEFE 392
Query: 210 EVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLI 269
E + LF M + G+ + +L +L L+ G H LV+ F V + LI
Sbjct: 393 ESLLLFEQMHELGITPDEHALSCLLKCITCLSCARDGLVAHGYLVKLGFGTQCAVCNALI 452
Query: 270 TMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDV 329
+ Y K + L+FD +D + WNS+ISG GL +++++F M+ G D
Sbjct: 453 SFYAKSNMIDNAVLVFDRMPHQDTISWNSVISGCTSNGLNSEAIELFVRMWMQGHELDST 512
Query: 330 TLVGVLSACS-----YTGKVKEGREI 350
TL+ VL AC+ + G+V G +
Sbjct: 513 TLLSVLPACARSHYWFVGRVVHGYSV 538
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 127/254 (50%), Gaps = 10/254 (3%)
Query: 162 VASNSMILGLGQNGEVQKARVVFDQM--REKDDATWSGMIKVYERKGYELEVIDLFTLMQ 219
V ++L + G++ AR+VFD+M R D W+ ++ Y + G E + LF MQ
Sbjct: 131 VLGKRLVLAYLKCGDLGGARMVFDEMPPRVADVRVWTSLMSAYAKAGDFQEGVSLFRQMQ 190
Query: 220 KEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELV 279
GV + ++ VL ASL S+ G +H L + VA+ LI +Y +CG +
Sbjct: 191 CCGVSPDAHAVSCVLKCIASLGSITEGEVIHGLLEKLGLGEACAVANALIALYSRCGCME 250
Query: 280 KGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACS 339
+FD+ ++D + WNS ISGY G ++++ +F +M+S G VT++ VL AC+
Sbjct: 251 DAMQVFDSMHARDAISWNSTISGYFSNGWHDRAVDLFSKMWSEGTEISSVTVLSVLPACA 310
Query: 340 YTGKVKEGREIFE-SMKSKYLVEPKTEHYAC-------MVDLLGRAGQVEDAMKLIEAMP 391
G G+ + SMKS L + ++ +V + + G + A ++ +AMP
Sbjct: 311 ELGFELVGKVVHGYSMKSGLLWDLESVQSGIDEALGSKLVFMYVKCGDMGSARRVFDAMP 370
Query: 392 FEPDAIIWGSLLGA 405
+ + +W ++G
Sbjct: 371 SKGNVHVWNLIMGG 384
>gi|222626043|gb|EEE60175.1| hypothetical protein OsJ_13106 [Oryza sativa Japonica Group]
Length = 628
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 208/570 (36%), Positives = 327/570 (57%), Gaps = 48/570 (8%)
Query: 15 GYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNM 74
Y + G +T A LF ++P +NV+SW ++ GG+I++ + AR+LFD MPE++V M
Sbjct: 85 AYADLGDLTAARELFERIPRRNVMSWNILFGGYIKNGDLGGARKLFDEMPERNVATWNAM 144
Query: 75 VLGYCQDGRVDEGREIF----------DEMPKKNVISWTTMISGYVNNNRID--VARKLF 122
V G G +E F DE +V + V ++ V R
Sbjct: 145 VAGLTNLGFDEESLGFFLDMRREGMHPDEFGLGSVFRCCAGLRDVVTGRQVHAYVVRSGL 204
Query: 123 EVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARV 182
+++ +++ Y +CG +Q+ + + +P S+V+ N++I G QNG+ + A
Sbjct: 205 ----DRDMCVGSSLAHMYMRCGCLQEGEAVLRMLPSLSIVSCNTIIAGRTQNGDSEGA-- 258
Query: 183 VFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLAS 242
++ F +M+ GV + + +S +S C+ LA+
Sbjct: 259 -----------------------------LEYFCMMRSVGVAADVVTFVSAISSCSDLAA 289
Query: 243 LDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISG 302
L G+Q+H Q+++ D V V + L+ MY +CG L + +F + D + +++IS
Sbjct: 290 LAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTFLLSAMISA 349
Query: 303 YAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEP 362
Y +G G+K++++F +M + G P DVT + +L ACS++G +EG + FE M Y ++P
Sbjct: 350 YGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDCFELMTKTYGMQP 409
Query: 363 KTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKL 422
+HY C+VDLLGR+G +++A LI +MP PD +IW +LL AC+T D+AE AK++
Sbjct: 410 SVKHYTCVVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLSACKTQKNFDMAERIAKRV 469
Query: 423 LQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGR 482
++L+P ++ Y+LLSNI A+ R+ DV+E+RK MR NV K PG SW+E++ +H F
Sbjct: 470 IELDPHDSASYVLLSNIRATSRRWGDVSEVRKAMRDNNVRKEPGVSWVELKGHIHQFCTG 529
Query: 483 DCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGL 542
D SHP I LE++ +R+ GY PD S VLHD+++EEK SL +HSEKLA+A+
Sbjct: 530 D-ESHPRQKEIDECLEEMMAKIRQCGYSPDMSMVLHDMEDEEKEVSLSHHSEKLAIAFAF 588
Query: 543 VKLPEGVPIRVMKNLRVCGDCHSAIKLISK 572
+ LPEGVPIRVMKNLRVC DCH AIKL+S+
Sbjct: 589 LSLPEGVPIRVMKNLRVCDDCHLAIKLMSQ 618
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 86/253 (33%), Positives = 140/253 (55%), Gaps = 3/253 (1%)
Query: 136 MLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATW 195
+++ Y G + A ELF+ +P ++V++ N + G +NG++ AR +FD+M E++ ATW
Sbjct: 82 LMLAYADLGDLTAARELFERIPRRNVMSWNILFGGYIKNGDLGGARKLFDEMPERNVATW 141
Query: 196 SGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVR 255
+ M+ G++ E + F M++EG+ + L SV CA L + GRQVHA +VR
Sbjct: 142 NAMVAGLTNLGFDEESLGFFLDMRREGMHPDEFGLGSVFRCCAGLRDVVTGRQVHAYVVR 201
Query: 256 CQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKV 315
D D+ V S L MY++CG L +G+ + S IV N+II+G Q G E +L+
Sbjct: 202 SGLDRDMCVGSSLAHMYMRCGCLQEGEAVLRMLPSLSIVSCNTIIAGRTQNGDSEGALEY 261
Query: 316 FHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIF-ESMKSKYLVEPKTEHYACMVDLL 374
F M S GV D VT V +S+CS + +G++I + MK+ V+ C+V +
Sbjct: 262 FCMMRSVGVAADVVTFVSAISSCSDLAALAQGQQIHGQVMKAG--VDKVVPVMTCLVHMY 319
Query: 375 GRAGQVEDAMKLI 387
R G + D+ ++
Sbjct: 320 SRCGCLGDSERVF 332
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 114/302 (37%), Gaps = 82/302 (27%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
+P RNV+SW + GY++ G + A LF +MPE+NV +W M+ G +++ F
Sbjct: 102 IPRRNVMSWNILFGGYIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFF 161
Query: 61 -DMMPE-------------------KDVVA-------------QTNMVLG------YCQD 81
DM E +DVV +M +G Y +
Sbjct: 162 LDMRREGMHPDEFGLGSVFRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRC 221
Query: 82 GRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVM---------------- 125
G + EG + +P +++S T+I+G N + A + F +M
Sbjct: 222 GCLQEGEAVLRMLPSLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAI 281
Query: 126 ---------PEKNEVSWTAMLMG--------------YTQCGRIQDAWELFKAMPMKSVV 162
+ ++ M G Y++CG + D+ +F
Sbjct: 282 SSCSDLAALAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTF 341
Query: 163 ASNSMILGLGQNGEVQKARVVFDQM----REKDDATWSGMIKVYERKGYELEVIDLFTLM 218
++MI G +G QKA +F QM E D T+ ++ G + E +D F LM
Sbjct: 342 LLSAMISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDCFELM 401
Query: 219 QK 220
K
Sbjct: 402 TK 403
Score = 46.6 bits (109), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 40/194 (20%), Positives = 71/194 (36%), Gaps = 43/194 (22%)
Query: 233 VLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKD 292
+ C +L L RQ+HA D + A+ L+ Y G+L + +F+ ++
Sbjct: 50 LFRACRALRPL---RQLHAFAATSGAATDRFTANHLMLAYADLGDLTAARELFERIPRRN 106
Query: 293 IVMWNSIISGY-------------------------------AQYGLGEKSLKVFHEMFS 321
++ WN + GY G E+SL F +M
Sbjct: 107 VMSWNILFGGYIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLDMRR 166
Query: 322 SGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLG----RA 377
G+ PD+ L V C+ V GR++ Y+V + C+ L R
Sbjct: 167 EGMHPDEFGLGSVFRCCAGLRDVVTGRQV-----HAYVVRSGLDRDMCVGSSLAHMYMRC 221
Query: 378 GQVEDAMKLIEAMP 391
G +++ ++ +P
Sbjct: 222 GCLQEGEAVLRMLP 235
>gi|115488220|ref|NP_001066597.1| Os12g0289800 [Oryza sativa Japonica Group]
gi|77554360|gb|ABA97156.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113649104|dbj|BAF29616.1| Os12g0289800 [Oryza sativa Japonica Group]
Length = 756
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 193/491 (39%), Positives = 309/491 (62%), Gaps = 4/491 (0%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
+P NV+SW +V GY + G + EA LF +MPE+NVV+W V+L G+++ S+++ A LF
Sbjct: 224 IPSPNVISWVNLVNGYCQAGRMGEARELFDRMPERNVVAWNVLLSGYVQFSQVEAAYNLF 283
Query: 61 DMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARK 120
MPEK+ ++ T MV G+ + G++ E +++ +MP NV + T ++ GY+ +N ID AR+
Sbjct: 284 IEMPEKNSISWTTMVSGFVRSGKLQEAKDVLSKMPSDNVGAKTALMHGYLKSNLIDDARQ 343
Query: 121 LFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKA 180
LF+ + ++ V W M+ GY QCG + +A LF+ MP K +++ N+MI G Q G+++KA
Sbjct: 344 LFDGIVVRDAVCWNTMISGYVQCGMLDEAMVLFQQMPNKDMISWNTMIAGCAQGGQIRKA 403
Query: 181 RVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASL 240
+F +M+ ++ +W+ +I + + G +E + F LM+++ ++ + LS A+L
Sbjct: 404 ASIFRKMKRRNTVSWNSIISGFVQNGLFVEALQHFMLMRRDAKSADWCTYACCLSASANL 463
Query: 241 ASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSII 300
A+L GRQ H+ LVR F D + LI+ Y KCG +++ + +FD +DIV WN++I
Sbjct: 464 ATLQIGRQFHSLLVRTGFISDSSPGNALISAYAKCGRMLEARQVFDEMVVQDIVSWNALI 523
Query: 301 SGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLV 360
GYA G G + + VF EM ++ V PD++TLV VLSACS+ G + EG F SM Y +
Sbjct: 524 DGYASNGNGSEVIAVFREMEANSVRPDEITLVVVLSACSHAGLIDEGLHFFNSMIKLYSL 583
Query: 361 EPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAK 420
+P EHY CMVDLLGRAG++ +A +L++ M +P+A +WG+LLGACR H ++A +AA+
Sbjct: 584 KPVAEHYTCMVDLLGRAGRLREAFELVQGMQIQPNAGVWGALLGACRVHKNHEIAWLAAE 643
Query: 421 KLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFT 480
KL +LEP A Y+LLSNI G++ D ++R M K ++++ C+ I + K+ +
Sbjct: 644 KLFELEPCKASNYVLLSNICVEAGKWDDADKVRVLM-KESILR--SCN-IHISNKMLDNS 699
Query: 481 GRDCVSHPEHP 491
G C P
Sbjct: 700 GYRCYGASWKP 710
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 139/519 (26%), Positives = 245/519 (47%), Gaps = 81/519 (15%)
Query: 20 GMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYC 79
G + A LF +MP +NVVS+ M+ R+ +ARRLFD MP ++ V+ M++
Sbjct: 25 GQLAAARRLFEEMPRRNVVSYNAMVSALAHHGRLAEARRLFDEMPRRNPVSWNTMMVACS 84
Query: 80 QDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMP-EKNEVSWTAMLM 138
Q GRV++ R +FD MP +N SWT M+S YV + +AR+L + MP EK + M+
Sbjct: 85 QHGRVEDARGLFDAMPARNEYSWTIMVSCYVRAGELTLARELLDRMPGEKCAACYNTMIS 144
Query: 139 GYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGM 198
GY + GR +DA L + MP +V+ NS++ GL +N E+ ++ FD+M +KD +W+ M
Sbjct: 145 GYAKNGRFEDAIALLQEMPAPDIVSWNSVLGGLIRNEEISRSVQFFDEMPDKDLVSWNLM 204
Query: 199 IKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQF 258
++ Y R G +L+V F R+ P++IS ++
Sbjct: 205 LEGYVRAG-DLDVASAFF------SRIPSPNVISWVN----------------------- 234
Query: 259 DVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHE 318
L+ Y + G + + + +FD +++V WN ++SGY Q+ E + +F E
Sbjct: 235 ---------LVNGYCQAGRMGEARELFDRMPERNVVAWNVLLSGYVQFSQVEAAYNLFIE 285
Query: 319 MFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAG 378
M + ++ ++S +GK++E +++ M S V KT A M L ++
Sbjct: 286 MPEK----NSISWTTMVSGFVRSGKLQEAKDVLSKMPSDN-VGAKT---ALMHGYL-KSN 336
Query: 379 QVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSN 438
++DA +L + + DA+ W +++ +++ + + A Q+ K+ + +
Sbjct: 337 LIDDARQLFDGIVVR-DAVCWNTMISG---YVQCGMLDEAMVLFQQMPNKDMISWNTMIA 392
Query: 439 IYASQGRFHDVAELRKNMRKRNVIKPPGCSW-----------IEVEKKVH-MFTGRD--- 483
A G+ A + + M++RN + SW + VE H M RD
Sbjct: 393 GCAQGGQIRKAASIFRKMKRRNTV-----SWNSIISGFVQNGLFVEALQHFMLMRRDAKS 447
Query: 484 --------CVSHPEHPMIMRMLEKIGGLLREAGYCPDSS 514
C+S + +++ + LL G+ DSS
Sbjct: 448 ADWCTYACCLSASANLATLQIGRQFHSLLVRTGFISDSS 486
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 148/559 (26%), Positives = 251/559 (44%), Gaps = 72/559 (12%)
Query: 1 MP-ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRL 59
MP E+ + M+ GY + G +A L +MP ++VSW +LGG IR+ I + +
Sbjct: 130 MPGEKCAACYNTMISGYAKNGRFEDAIALLQEMPAPDIVSWNSVLGGLIRNEEISRSVQF 189
Query: 60 FDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVAR 119
FD MP+KD+V+ M+ GY + G +D F +P NVISW +++GY R+ AR
Sbjct: 190 FDEMPDKDLVSWNLMLEGYVRAGDLDVASAFFSRIPSPNVISWVNLVNGYCQAGRMGEAR 249
Query: 120 KLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQK 179
+LF+ MPE+N V+W +L GY Q +++ A+ LF MP K+ ++ +M+ G ++G++Q+
Sbjct: 250 ELFDRMPERNVVAWNVLLSGYVQFSQVEAAYNLFIEMPEKNSISWTTMVSGFVRSGKLQE 309
Query: 180 ARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFT-LMQKEGVRVNFPSLISVLSVCA 238
A+ V +M + + ++ Y + + LF ++ ++ V N ++IS C
Sbjct: 310 AKDVLSKMPSDNVGAKTALMHGYLKSNLIDDARQLFDGIVVRDAVCWN--TMISGYVQC- 366
Query: 239 SLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNS 298
LD + Q+ + D+ + +I + G++ K IF ++ V WNS
Sbjct: 367 --GMLDEAMVLFQQMP----NKDMISWNTMIAGCAQGGQIRKAASIFRKMKRRNTVSWNS 420
Query: 299 IISGYAQYGLGEKSL----------------------------------KVFHEMF-SSG 323
IISG+ Q GL ++L + FH + +G
Sbjct: 421 IISGFVQNGLFVEALQHFMLMRRDAKSADWCTYACCLSASANLATLQIGRQFHSLLVRTG 480
Query: 324 VMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKT--EHYACMVDLLGRAGQVE 381
+ D ++SA + G++ E R++F+ M + +V + YA G +V
Sbjct: 481 FISDSSPGNALISAYAKCGRMLEARQVFDEMVVQDIVSWNALIDGYASN----GNGSEVI 536
Query: 382 DAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAE---VAAKKLLQLEPKNAGPYILLSN 438
+ +EA PD I +L AC +D + KL L+P A Y + +
Sbjct: 537 AVFREMEANSVRPDEITLVVVLSACSHAGLIDEGLHFFNSMIKLYSLKPV-AEHYTCMVD 595
Query: 439 IYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLE 498
+ GR + EL + M+ I+P W + C H H + E
Sbjct: 596 LLGRAGRLREAFELVQGMQ----IQPNAGVWGALLGA--------CRVHKNHEIAWLAAE 643
Query: 499 KIGGLLREAGYCPDSSFVL 517
K L E C S++VL
Sbjct: 644 K----LFELEPCKASNYVL 658
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 102/361 (28%), Positives = 188/361 (52%), Gaps = 13/361 (3%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MP RN VSW M+ + G + +A LF MP +N SWT+M+ ++R + AR L
Sbjct: 68 MPRRNPVSWNTMMVACSQHGRVEDARGLFDAMPARNEYSWTIMVSCYVRAGELTLARELL 127
Query: 61 DMMP-EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVAR 119
D MP EK M+ GY ++GR ++ + EMP +++SW +++ G + N I +
Sbjct: 128 DRMPGEKCAACYNTMISGYAKNGRFEDAIALLQEMPAPDIVSWNSVLGGLIRNEEISRSV 187
Query: 120 KLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQK 179
+ F+ MP+K+ VSW ML GY + G + A F +P +V++ +++ G Q G + +
Sbjct: 188 QFFDEMPDKDLVSWNLMLEGYVRAGDLDVASAFFSRIPSPNVISWVNLVNGYCQAGRMGE 247
Query: 180 ARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCAS 239
AR +FD+M E++ W+ ++ Y + +LF M ++ N S +++S
Sbjct: 248 ARELFDRMPERNVVAWNVLLSGYVQFSQVEAAYNLFIEMPEK----NSISWTTMVSGFVR 303
Query: 240 LASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSI 299
L + V +++ +V + L+ Y+K + + +FD +D V WN++
Sbjct: 304 SGKLQEAKDVLSKMP----SDNVGAKTALMHGYLKSNLIDDARQLFDGIVVRDAVCWNTM 359
Query: 300 ISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYL 359
ISGY Q G+ ++++ +F +M + D ++ +++ C+ G++++ IF MK +
Sbjct: 360 ISGYVQCGMLDEAMVLFQQMPNK----DMISWNTMIAGCAQGGQIRKAASIFRKMKRRNT 415
Query: 360 V 360
V
Sbjct: 416 V 416
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 91/358 (25%), Positives = 165/358 (46%), Gaps = 22/358 (6%)
Query: 106 ISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASN 165
++ + ++ AR+LFE MP +N VS+ AM+ GR+ +A LF MP ++ V+ N
Sbjct: 18 LTSLARSGQLAAARRLFEEMPRRNVVSYNAMVSALAHHGRLAEARRLFDEMPRRNPVSWN 77
Query: 166 SMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRV 225
+M++ Q+G V+ AR +FD M +++ +W+ M+ Y R G +L M E
Sbjct: 78 TMMVACSQHGRVEDARGLFDAMPARNEYSWTIMVSCYVRAGELTLARELLDRMPGEKCAA 137
Query: 226 NFPSLISVLSVCASLASLDHGRQVHA-QLVRCQFDVDVYVASVLITMYIKCGELVKGKLI 284
+ ++IS + +GR A L++ D+ + ++ I+ E+ +
Sbjct: 138 CYNTMISGYA--------KNGRFEDAIALLQEMPAPDIVSWNSVLGGLIRNEEISRSVQF 189
Query: 285 FDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKV 344
FD KD+V WN ++ GY + G L V FS P+ ++ V +++ G++
Sbjct: 190 FDEMPDKDLVSWNLMLEGYVRAG----DLDVASAFFSRIPSPNVISWVNLVNGYCQAGRM 245
Query: 345 KEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLG 404
E RE+F+ M + +V + ++ + QVE A L MP E ++I W +++
Sbjct: 246 GEARELFDRMPERNVVA-----WNVLLSGYVQFSQVEAAYNLFIEMP-EKNSISWTTMVS 299
Query: 405 ACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVI 462
KL + A L ++ N G L + Y D +L + R+ +
Sbjct: 300 GFVRSGKL---QEAKDVLSKMPSDNVGAKTALMHGYLKSNLIDDARQLFDGIVVRDAV 354
>gi|302797883|ref|XP_002980702.1| hypothetical protein SELMODRAFT_113181 [Selaginella moellendorffii]
gi|300151708|gb|EFJ18353.1| hypothetical protein SELMODRAFT_113181 [Selaginella moellendorffii]
Length = 1108
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 225/636 (35%), Positives = 348/636 (54%), Gaps = 49/636 (7%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMP--EKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKD 67
T +V Y + G I EA +F +MP +++V+W VMLG + ++ R +A M +
Sbjct: 477 TMLVSMYGKCGSIAEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGG 536
Query: 68 VV---------------AQTNMVLGYC-----------------QDGR---VDEGREIFD 92
V+ +Q VL C GR +++ R +FD
Sbjct: 537 VLPDALSFTSVLSSCYCSQEAQVLRMCILESGYRSACLETALISMHGRCRELEQARSVFD 596
Query: 93 EMPKKNVISWTTMISGYVNNNRIDVARKLFE------VMPEKNEVSWTA-MLMGYTQCGR 145
EM +V+SWT M+S N LF V+P+K ++ T + T G
Sbjct: 597 EMDHGDVVSWTAMVSATAENRDFKEVHHLFRRMQLEGVIPDKFTLATTLDTCLDSTTLGL 656
Query: 146 IQDAWELFKAMPMKSVVASNSMILGLGQN-GEVQKARVVFDQMREKDDATWSGMIKVYER 204
+ + +++ +A + +L + N G+ ++A F+ M+ +D +W+ M Y +
Sbjct: 657 GKIIHACVTEIGLEADIAVENALLNMYSNCGDWREALSFFETMKARDLVSWNIMSAAYAQ 716
Query: 205 KGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYV 264
G E + LF MQ EGV+ + + + L+V A + G+ H D DV V
Sbjct: 717 AGLAKEAVLLFRHMQLEGVKPDKLTFSTTLNVSGGSALVSDGKLFHGLAAESGLDSDVSV 776
Query: 265 ASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGV 324
A+ L+ +Y KCG+L + +F +V+ N+II AQ+G E+++K+F +M GV
Sbjct: 777 ATGLVKLYAKCGKLDEAISLFRGACQWTVVLLNAIIGALAQHGFSEEAVKMFWKMQQEGV 836
Query: 325 MPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAM 384
PD TLV ++SAC + G V+EG F +MK + + P EHYAC VDLLGRAGQ+E A
Sbjct: 837 RPDVATLVSIISACGHAGMVEEGCSSFLTMKEYFGISPTLEHYACFVDLLGRAGQLEHAE 896
Query: 385 KLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQG 444
++I MPFE + ++W SLLG C+ +L E A+++L+L+P N+ +++LSNIY + G
Sbjct: 897 QIIRKMPFEDNTLVWTSLLGTCKLQGDAELGERCAQRILELDPHNSAAHVVLSNIYCATG 956
Query: 445 RFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLL 504
++ D RK + +NV PG SW+E+ K+VH F D SHP+ I +L+K+ L+
Sbjct: 957 KWKDADVDRKKLLDQNVKNAPGMSWLEIGKQVHEFVAGD-RSHPQTDEIYVVLDKLELLM 1015
Query: 505 REAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCH 564
R AGY D D ++E K +L YHSE++A+A+GL+ P ++++KNLRVCGDCH
Sbjct: 1016 RRAGYEADKGL---DAEDELKEKALGYHSERIAIAFGLIATPPDTTLKIVKNLRVCGDCH 1072
Query: 565 SAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
+A K IS +MGREII+RD+ RFHHF +G CSC+D W
Sbjct: 1073 TATKYISMIMGREIIVRDSLRFHHFSNGTCSCKDCW 1108
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 116/471 (24%), Positives = 213/471 (45%), Gaps = 29/471 (6%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM-----PEKNVVSWTVMLGGFIRDSRIDD 55
M ERNVVSWTA++ + G A LF M N + ML +
Sbjct: 86 MEERNVVSWTALISANAQSGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRDLAI 145
Query: 56 ARRLFDMMPEKDVVAQTN--------MVLGYCQDGRVDEGREIFDEMPKKNVISWTTMIS 107
R + M+ E + ++ M+ Y + G ++ +F +P+K+V+SWT M
Sbjct: 146 GRSIHAMIWELGLERESTTATLVGNAMINMYAKCGSPEDAIAVFLTIPEKDVVSWTAMAG 205
Query: 108 GYVNNNRI--DVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSV---- 161
Y R D R E++ + + + C ++D L + +
Sbjct: 206 AYAQERRFYPDALRIFREMLLQPLAPNVITFITALGACTSLRDGTWLHSLLHEAGLGFDP 265
Query: 162 VASNSMILGLGQNGEVQKARVVFDQM---REKDDATWSGMIKVYERKGYELEVIDLFTLM 218
+A N++I G+ G+ + A VF M +E D +W+ MI G + + +F +
Sbjct: 266 LAGNALINMYGKCGDWEGAYGVFKAMASRQELDLVSWNAMISASVEAGRHGDAMAIFRRL 325
Query: 219 QKEGVRVNFPSLISVLSVCASLASLDHG--RQVHAQLVRCQFDVDVYVASVLITMYIKCG 276
+ EG+R N +LI++L+ A+ + +D G R+ H ++ + DV V + +I+MY KCG
Sbjct: 326 RLEGMRPNSVTLITILNALAA-SGVDFGAARKFHGRIWESGYLRDVVVGNAIISMYAKCG 384
Query: 277 ELVKGKLIFDNFASK-DIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVL 335
+F K D++ WN+++ K + FH M +G+ P+ V+ + +L
Sbjct: 385 FFSAAWTVFRRIRWKCDVISWNTMLGASEDRKSFGKVVNTFHHMLLAGIDPNKVSFIAIL 444
Query: 336 SACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPD 395
+ACS + + GR+I + ++ ++ +V + G+ G + +A + + MP
Sbjct: 445 NACSNSEALDFGRKIHSLILTRRRDYVESSVATMLVSMYGKCGSIAEAELVFKEMPLPSR 504
Query: 396 AII-WGSLLGACRTHMKLDLAEVAAKKLLQ--LEPKNAGPYILLSNIYASQ 443
+++ W +LGA + + A A ++LQ + P +LS+ Y SQ
Sbjct: 505 SLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVLPDALSFTSVLSSCYCSQ 555
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 97/395 (24%), Positives = 172/395 (43%), Gaps = 40/395 (10%)
Query: 40 WTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYC------QDGRVDEGREIFDE 93
+T +L + + + +R +++ + + ++ LG C + G ++E IF +
Sbjct: 28 YTALLQSCVDSNDLAKGKRAHELIANAGL--EQHLFLGNCLINMYVRCGSLEEAHAIFSK 85
Query: 94 MPKKNVISWTTMISGYVNNNRIDVARKLFEVM-----PEKNEVSWTAMLMGYTQCGRIQD 148
M ++NV+SWT +IS + A LF M N + AML C +D
Sbjct: 86 MEERNVVSWTALISANAQSGAFARAFALFRTMLLESSAAPNSYTLVAML---NACANSRD 142
Query: 149 ----------AWEL-FKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSG 197
WEL + + + N+MI + G + A VF + EKD +W+
Sbjct: 143 LAIGRSIHAMIWELGLERESTTATLVGNAMINMYAKCGSPEDAIAVFLTIPEKDVVSWTA 202
Query: 198 MIKVY--ERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVR 255
M Y ER+ Y + + +F M + + N + I+ L C SL G +H+ L
Sbjct: 203 MAGAYAQERRFYP-DALRIFREMLLQPLAPNVITFITALGACTSLRD---GTWLHSLLHE 258
Query: 256 CQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASK---DIVMWNSIISGYAQYGLGEKS 312
D + LI MY KCG+ +F AS+ D+V WN++IS + G +
Sbjct: 259 AGLGFDPLAGNALINMYGKCGDWEGAYGVFKAMASRQELDLVSWNAMISASVEAGRHGDA 318
Query: 313 LKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESM--KSKYLVEPKTEHYACM 370
+ +F + G+ P+ VTL+ +L+A + +G F +S YL + + +
Sbjct: 319 MAIFRRLRLEGMRPNSVTLITILNALAASGVDFGAARKFHGRIWESGYLRDVVVGN--AI 376
Query: 371 VDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
+ + + G A + + ++ D I W ++LGA
Sbjct: 377 ISMYAKCGFFSAAWTVFRRIRWKCDVISWNTMLGA 411
>gi|449479601|ref|XP_004155648.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Cucumis sativus]
Length = 663
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 207/549 (37%), Positives = 319/549 (58%), Gaps = 32/549 (5%)
Query: 72 TNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMIS-----GYVNNNRIDVARKLFEVMP 126
T ++ C G + R +F +P + + +++ G+ + + R LF P
Sbjct: 127 TKLISLVCTAGSITYARRLFPTVPNPDSFLFDSLLKVTSKFGFSIDTVLFYRRMLFSGAP 186
Query: 127 EKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARV---- 182
+ N YT I+ +L A+ + + S+ M+ G G + VQ A +
Sbjct: 187 QSN----------YTFTSVIKACADL-SALRLGKEIHSHVMVCGYGSDMYVQAALIALYA 235
Query: 183 ----------VFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLIS 232
VFD M ++ W+ +I Y++ G E I LF LM + G + + +++S
Sbjct: 236 KASDMKVAKKVFDAMPQRTIIAWNSLISGYDQNGLPQESIGLFHLMMESGFQPDSATIVS 295
Query: 233 VLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKD 292
+LS C+ L +LD G +H FD++V + + LI MY +CG + K + +FD+ ++
Sbjct: 296 LLSSCSQLGALDFGCWLHDYADGNGFDLNVVLGTSLINMYTRCGNVSKAREVFDSMKERN 355
Query: 293 IVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFE 352
+V W ++ISGY +G G +++++F EM + G P+++T V VLSAC+++G + +GR +F
Sbjct: 356 VVTWTAMISGYGMHGYGRQAMELFTEMRAYGPRPNNITFVAVLSACAHSGLIDDGRRVFS 415
Query: 353 SMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEA-MPFEPDAIIWGSLLGACRTHMK 411
SMK Y + P EH CMVD+ GRAG + DA + I+ +P EP +W S+LGACR H
Sbjct: 416 SMKEAYGLVPGVEHNVCMVDMFGRAGLLNDAYQFIKKFIPKEPGPAVWTSMLGACRMHRN 475
Query: 412 LDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIE 471
DL A+ +L +EP+N G Y++LSNIYA GR V +R M +R + K G S IE
Sbjct: 476 FDLGVKVAEHVLSVEPENPGHYVMLSNIYALAGRMDRVEMVRNMMTRRRLKKQVGYSTIE 535
Query: 472 VEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRY 531
+ +K ++F+ D SHP+ I R L+++ E+GY P ++HD++EEE+ ++LRY
Sbjct: 536 INRKTYLFSMGD-KSHPQTNTIYRYLDELMCRCSESGYVPAPESLMHDLEEEERDYALRY 594
Query: 532 HSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKD 591
HSEKLA+A+GL+K +G IR++KNLR+C DCHSAIK IS + REII+RD RFHHFKD
Sbjct: 595 HSEKLALAFGLLKTNQGETIRIVKNLRICEDCHSAIKHISIIADREIIVRDKFRFHHFKD 654
Query: 592 GLCSCRDYW 600
G CSC DYW
Sbjct: 655 GSCSCLDYW 663
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 99/195 (50%), Gaps = 8/195 (4%)
Query: 67 DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMP 126
D+ Q ++ Y + + +++FD MP++ +I+W ++ISGY N + LF +M
Sbjct: 223 DMYVQAALIALYAKASDMKVAKKVFDAMPQRTIIAWNSLISGYDQNGLPQESIGLFHLMM 282
Query: 127 EK----NEVSWTAMLMGYTQCGRIQDAWELFKAMPMK----SVVASNSMILGLGQNGEVQ 178
E + + ++L +Q G + L +VV S+I + G V
Sbjct: 283 ESGFQPDSATIVSLLSSCSQLGALDFGCWLHDYADGNGFDLNVVLGTSLINMYTRCGNVS 342
Query: 179 KARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCA 238
KAR VFD M+E++ TW+ MI Y GY + ++LFT M+ G R N + ++VLS CA
Sbjct: 343 KAREVFDSMKERNVVTWTAMISGYGMHGYGRQAMELFTEMRAYGPRPNNITFVAVLSACA 402
Query: 239 SLASLDHGRQVHAQL 253
+D GR+V + +
Sbjct: 403 HSGLIDDGRRVFSSM 417
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 103/222 (46%), Gaps = 27/222 (12%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEK----------NVVSWTVMLGGFIRD 50
MP+R +++W +++ GY + G+ E+ LF M E +++S LG
Sbjct: 250 MPQRTIIAWNSLISGYDQNGLPQESIGLFHLMMESGFQPDSATIVSLLSSCSQLGALDFG 309
Query: 51 SRIDDAR--RLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISG 108
+ D FD+ +VV T+++ Y + G V + RE+FD M ++NV++WT MISG
Sbjct: 310 CWLHDYADGNGFDL----NVVLGTSLINMYTRCGNVSKAREVFDSMKERNVVTWTAMISG 365
Query: 109 YVNNNRIDVARKLFEVM----PEKNEVSWTAMLMGYTQCGRIQDAWELFKAMP-----MK 159
Y + A +LF M P N +++ A+L G I D +F +M +
Sbjct: 366 YGMHGYGRQAMELFTEMRAYGPRPNNITFVAVLSACAHSGLIDDGRRVFSSMKEAYGLVP 425
Query: 160 SVVASNSMILGLGQNGEVQKARVVFDQM--REKDDATWSGMI 199
V + M+ G+ G + A + +E A W+ M+
Sbjct: 426 GVEHNVCMVDMFGRAGLLNDAYQFIKKFIPKEPGPAVWTSML 467
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 92/191 (48%), Gaps = 12/191 (6%)
Query: 11 AMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEK---- 66
A++ Y + + A +F MP++ +++W ++ G+ ++ ++ LF +M E
Sbjct: 229 ALIALYAKASDMKVAKKVFDAMPQRTIIAWNSLISGYDQNGLPQESIGLFHLMMESGFQP 288
Query: 67 DVVAQTNMVLGYCQDGRVDEGREIFDEMPKK----NVISWTTMISGYVNNNRIDVARKLF 122
D +++ Q G +D G + D NV+ T++I+ Y + AR++F
Sbjct: 289 DSATIVSLLSSCSQLGALDFGCWLHDYADGNGFDLNVVLGTSLINMYTRCGNVSKAREVF 348
Query: 123 EVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAM----PMKSVVASNSMILGLGQNGEVQ 178
+ M E+N V+WTAM+ GY G + A ELF M P + + +++ +G +
Sbjct: 349 DSMKERNVVTWTAMISGYGMHGYGRQAMELFTEMRAYGPRPNNITFVAVLSACAHSGLID 408
Query: 179 KARVVFDQMRE 189
R VF M+E
Sbjct: 409 DGRRVFSSMKE 419
>gi|356519174|ref|XP_003528249.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Glycine max]
Length = 975
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 223/643 (34%), Positives = 349/643 (54%), Gaps = 57/643 (8%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPE---- 65
++V Y + G + EA LF KNVVSW ++ G+ S+ D R +F+++ E
Sbjct: 338 NSLVDMYSKCGYLGEARALFDMNGGKNVVSWNTIIWGY---SKEGDFRGVFELLQEMQRE 394
Query: 66 ---------------------------------------KDVVAQTNMVLGYCQDGRVDE 86
KD + V Y + +D
Sbjct: 395 EKVRVNEVTVLNVLPACSGEHQLLSLKEIHGYAFRHGFLKDELVANAFVAAYAKCSSLDC 454
Query: 87 GREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEK----NEVSWTAMLMG--- 139
+F M K V SW +I + N + LF VM + + + ++L+
Sbjct: 455 AERVFCGMEGKTVSSWNALIGAHAQNGFPGKSLDLFLVMMDSGMDPDRFTIGSLLLACAR 514
Query: 140 --YTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSG 197
+ +CG+ + L + + + + M L + Q + +++FD+M K W+
Sbjct: 515 LKFLRCGKEIHGFMLRNGLELDEFIGISLMSLYI-QCSSMLLGKLIFDKMENKSLVCWNV 573
Query: 198 MIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQ 257
MI + + E +D F M G++ ++ VL C+ +++L G++VH+ ++
Sbjct: 574 MITGFSQNELPCEALDTFRQMLSGGIKPQEIAVTGVLGACSQVSALRLGKEVHSFALKAH 633
Query: 258 FDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFH 317
D +V LI MY KCG + + + IFD KD +WN II+GY +G G K++++F
Sbjct: 634 LSEDAFVTCALIDMYAKCGCMEQSQNIFDRVNEKDEAVWNVIIAGYGIHGHGLKAIELFE 693
Query: 318 EMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRA 377
M + G PD T +GVL AC++ G V EG + M++ Y V+PK EHYAC+VD+LGRA
Sbjct: 694 LMQNKGGRPDSFTFLGVLIACNHAGLVTEGLKYLGQMQNLYGVKPKLEHYACVVDMLGRA 753
Query: 378 GQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLS 437
GQ+ +A+KL+ MP EPD+ IW SLL +CR + L++ E +KKLL+LEP A Y+LLS
Sbjct: 754 GQLTEALKLVNEMPDEPDSGIWSSLLSSCRNYGDLEIGEEVSKKLLELEPNKAENYVLLS 813
Query: 438 NIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRML 497
N+YA G++ +V ++R+ M++ + K GCSWIE+ V+ F D S E I +
Sbjct: 814 NLYAGLGKWDEVRKVRQRMKENGLHKDAGCSWIEIGGMVYRFLVSD-GSLSESKKIQQTW 872
Query: 498 EKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNL 557
K+ + + GY PD+S VLH+++EE K+ L+ HSEKLA+++GL+ +G +RV KNL
Sbjct: 873 IKLEKKISKIGYKPDTSCVLHELEEEGKIKILKSHSEKLAISFGLLNTAKGTTLRVCKNL 932
Query: 558 RVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
R+C DCH+AIKL+SKV+ R+II+RD RFHHFK+GLC+C D+W
Sbjct: 933 RICVDCHNAIKLVSKVVKRDIIVRDNKRFHHFKNGLCTCGDFW 975
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 109/432 (25%), Positives = 207/432 (47%), Gaps = 28/432 (6%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM----PEKNVVSWTVMLGGFIRDSRIDDA 56
M RN+VSW +++ E G E +F ++ E V M+ + + +
Sbjct: 256 MRNRNLVSWNSVMYACSENGGFGECCGVFKRLLISEEEGLVPDVATMVTVIPACAAVGEV 315
Query: 57 RR-------LFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGY 109
R F + ++V ++V Y + G + E R +FD KNV+SW T+I GY
Sbjct: 316 RMGMVVHGLAFKLGITEEVTVNNSLVDMYSKCGYLGEARALFDMNGGKNVVSWNTIIWGY 375
Query: 110 VNNNRIDVARKLFEVMPEK--------NEVSWTAMLMGYTQCGRIQDAWEL----FKAMP 157
R +FE++ E NEV+ +L + ++ E+ F+
Sbjct: 376 SKEGDF---RGVFELLQEMQREEKVRVNEVTVLNVLPACSGEHQLLSLKEIHGYAFRHGF 432
Query: 158 MKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTL 217
+K + +N+ + + + A VF M K ++W+ +I + + G+ + +DLF +
Sbjct: 433 LKDELVANAFVAAYAKCSSLDCAERVFCGMEGKTVSSWNALIGAHAQNGFPGKSLDLFLV 492
Query: 218 MQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGE 277
M G+ + ++ S+L CA L L G+++H ++R ++D ++ L+++YI+C
Sbjct: 493 MMDSGMDPDRFTIGSLLLACARLKFLRCGKEIHGFMLRNGLELDEFIGISLMSLYIQCSS 552
Query: 278 LVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSA 337
++ GKLIFD +K +V WN +I+G++Q L ++L F +M S G+ P ++ + GVL A
Sbjct: 553 MLLGKLIFDKMENKSLVCWNVMITGFSQNELPCEALDTFRQMLSGGIKPQEIAVTGVLGA 612
Query: 338 CSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAI 397
CS ++ G+E+ +L E A ++D+ + G +E + + + + E D
Sbjct: 613 CSQVSALRLGKEVHSFALKAHLSEDAFVTCA-LIDMYAKCGCMEQSQNIFDRVN-EKDEA 670
Query: 398 IWGSLLGACRTH 409
+W ++ H
Sbjct: 671 VWNVIIAGYGIH 682
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 88/370 (23%), Positives = 166/370 (44%), Gaps = 23/370 (6%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQM-------PEKNVVSWTVMLGGFIRDSRIDD 55
E+++ + A++ GY + +A +LF ++ P+ + + D + +
Sbjct: 156 EKDLFLYNALLSGYSRNALFRDAISLFLELLSATDLAPDNFTLPCVAKACAGVADVELGE 215
Query: 56 ARRLFDMMPE--KDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNN 113
A + D ++ Y + G V+ ++F+ M +N++SW +++ N
Sbjct: 216 AVHALALKAGGFSDAFVGNALIAMYGKCGFVESAVKVFETMRNRNLVSWNSVMYACSENG 275
Query: 114 RIDVARKLFE---VMPEKNEVSWTAML---------MGYTQCGRIQDAWELFKAMPMKSV 161
+F+ + E+ V A + +G + G + FK + V
Sbjct: 276 GFGECCGVFKRLLISEEEGLVPDVATMVTVIPACAAVGEVRMGMVVHGLA-FKLGITEEV 334
Query: 162 VASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQK- 220
+NS++ + G + +AR +FD K+ +W+ +I Y ++G V +L MQ+
Sbjct: 335 TVNNSLVDMYSKCGYLGEARALFDMNGGKNVVSWNTIIWGYSKEGDFRGVFELLQEMQRE 394
Query: 221 EGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVK 280
E VRVN ++++VL C+ L +++H R F D VA+ + Y KC L
Sbjct: 395 EKVRVNEVTVLNVLPACSGEHQLLSLKEIHGYAFRHGFLKDELVANAFVAAYAKCSSLDC 454
Query: 281 GKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSY 340
+ +F K + WN++I +AQ G KSL +F M SG+ PD T+ +L AC+
Sbjct: 455 AERVFCGMEGKTVSSWNALIGAHAQNGFPGKSLDLFLVMMDSGMDPDRFTIGSLLLACAR 514
Query: 341 TGKVKEGREI 350
++ G+EI
Sbjct: 515 LKFLRCGKEI 524
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 142/303 (46%), Gaps = 23/303 (7%)
Query: 66 KDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLF--- 122
DVV T ++ Y G + R +FD +K++ + ++SGY N A LF
Sbjct: 126 NDVVLSTRIIAMYSACGSPSDSRGVFDAAKEKDLFLYNALLSGYSRNALFRDAISLFLEL 185
Query: 123 ----EVMPEKNEVSWTAMLMGYTQCGRIQDA--WELFKAMPMKS-----VVASNSMILGL 171
++ P+ + A C + D E A+ +K+ N++I
Sbjct: 186 LSATDLAPDNFTLPCVA-----KACAGVADVELGEAVHALALKAGGFSDAFVGNALIAMY 240
Query: 172 GQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFT---LMQKEGVRVNFP 228
G+ G V+ A VF+ MR ++ +W+ ++ G E +F + ++EG+ +
Sbjct: 241 GKCGFVESAVKVFETMRNRNLVSWNSVMYACSENGGFGECCGVFKRLLISEEEGLVPDVA 300
Query: 229 SLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNF 288
++++V+ CA++ + G VH + +V V + L+ MY KCG L + + +FD
Sbjct: 301 TMVTVIPACAAVGEVRMGMVVHGLAFKLGITEEVTVNNSLVDMYSKCGYLGEARALFDMN 360
Query: 289 ASKDIVMWNSIISGYAQYGLGEKSLKVFHEM-FSSGVMPDDVTLVGVLSACSYTGKVKEG 347
K++V WN+II GY++ G ++ EM V ++VT++ VL ACS ++
Sbjct: 361 GGKNVVSWNTIIWGYSKEGDFRGVFELLQEMQREEKVRVNEVTVLNVLPACSGEHQLLSL 420
Query: 348 REI 350
+EI
Sbjct: 421 KEI 423
>gi|357501931|ref|XP_003621254.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355496269|gb|AES77472.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 700
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 223/653 (34%), Positives = 357/653 (54%), Gaps = 59/653 (9%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDM 62
E N++ +++ YV+ + A LF +M ++VVS+ V++GG++ + +LF
Sbjct: 52 EFNIIQLNSLINLYVKCSKLRLARYLFDEMSLRSVVSYNVLMGGYLHSGEHLEVVKLFKN 111
Query: 63 M------PEKDVVAQTNMVLGYC-QDGRVDEGREIFDEMPKKNVISW----TTMISGYVN 111
M P + V VL C GRV EG + + K ++ ++++ Y
Sbjct: 112 MVSSLYQPNEYVFTT---VLSACAHSGRVFEGMQCHGFLFKFGLVFHHFVKSSLVHMYSK 168
Query: 112 NNRIDVARKLFE-----VMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVV---A 163
+D+A ++ E + + + + ++L + GR+ +A E+ M + VV
Sbjct: 169 CFHVDLALQVLESEHGNIDNDNDAFCYNSVLNALVESGRLGEAVEVLGRMVDEGVVWDSV 228
Query: 164 SNSMILGL------------------------------------GQNGEVQKARVVFDQM 187
+ ++GL G+ G+V AR VFD +
Sbjct: 229 TYVSVMGLCGQIRDLGLGLQVHAQLLKGGLTFDVFVGSMLVDMFGKCGDVLSARKVFDGL 288
Query: 188 REKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGR 247
+ ++ W+ ++ Y + G E ++L + M +EG N + +L+ A +A+L HG
Sbjct: 289 QNRNVVVWTSLMTAYLQNGEFEETLNLLSCMDREGTMSNEFTFAVLLNAFAGMAALRHGD 348
Query: 248 QVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYG 307
+HA++ + V V + LI MY KCG + +F + ++DI+ WN++I GY+Q+G
Sbjct: 349 LLHARVEKLGIKNRVIVGNALINMYSKCGCIDSSYDVFFDMRNRDIITWNAMICGYSQHG 408
Query: 308 LGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHY 367
LG+++L +F +M S+G P+ VT VGVLSAC++ V EG + + VEP EHY
Sbjct: 409 LGKQALLLFQDMLSAGECPNHVTFVGVLSACAHLALVNEGFYYLNQLMKHFKVEPGLEHY 468
Query: 368 ACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEP 427
C+V +L RAG +E+A + + D + W LL AC H +L A+ +LQ++P
Sbjct: 469 TCVVAVLCRAGMLEEAENFMRTTQVKWDVVAWRVLLNACNIHRNYNLGTKIAETILQMDP 528
Query: 428 KNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSH 487
++ G Y LLSN+YA + V +RK MR+RNV K PG SWIE+ VH+F+ D +H
Sbjct: 529 RDMGTYTLLSNMYAKARSWDSVTMIRKMMRERNVKKEPGVSWIEIRNAVHVFSS-DGSNH 587
Query: 488 PEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPE 547
PE I ++ + ++++ GY P+ VLHDV++E+K L YHSEKLA+AYGL+K+P
Sbjct: 588 PECIQIYNKVQLLLEMIKQLGYVPNIEAVLHDVEDEQKESYLNYHSEKLAIAYGLMKIPS 647
Query: 548 GVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
PIRV+KNLR+C DCH+A+KLISKV R II+RDA+RFHHF+DG C+C D+W
Sbjct: 648 PAPIRVIKNLRICEDCHTAVKLISKVTNRLIIVRDASRFHHFRDGTCTCTDHW 700
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 95/182 (52%), Gaps = 17/182 (9%)
Query: 238 ASLASLDHGRQVHAQL-VRCQF-------DVDVYVASVLITMYIKCGELVKGKLIFDNFA 289
A+ +L+ G+ +H QL +R Q + ++ + LI +Y+KC +L + +FD +
Sbjct: 23 ANTKNLNFGKSIHTQLLIRNQSSTHHSYREFNIIQLNSLINLYVKCSKLRLARYLFDEMS 82
Query: 290 SKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGRE 349
+ +V +N ++ GY G + +K+F M SS P++ VLSAC+++G+V EG +
Sbjct: 83 LRSVVSYNVLMGGYLHSGEHLEVVKLFKNMVSSLYQPNEYVFTTVLSACAHSGRVFEGMQ 142
Query: 350 IFESMKSKYLVEPKTEHY--ACMVDLLGRAGQVEDAMKLIEA----MPFEPDAIIWGSLL 403
+ LV H+ + +V + + V+ A++++E+ + + DA + S+L
Sbjct: 143 CHGFLFKFGLV---FHHFVKSSLVHMYSKCFHVDLALQVLESEHGNIDNDNDAFCYNSVL 199
Query: 404 GA 405
A
Sbjct: 200 NA 201
>gi|147856413|emb|CAN82500.1| hypothetical protein VITISV_004914 [Vitis vinifera]
Length = 1408
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 215/612 (35%), Positives = 332/612 (54%), Gaps = 51/612 (8%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMP----EKNVVSWTVMLGGFIRDSRIDDA 56
M RN SW +M+ Y G + +A +LF+++ + ++V+W +L G ++
Sbjct: 836 MENRNTSSWNSMISSYAALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEV 895
Query: 57 RRLFDMMP----EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKK----NVISWTTMISG 108
+ M + + + T+++ + G ++ G+E + + +V T++I
Sbjct: 896 LNILQRMQGEGFKPNSSSMTSVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDM 955
Query: 109 YVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMI 168
YV N+ + A+ +F+ M +N +W +++ GY+ G +DA L M + +
Sbjct: 956 YVKNHSLXSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGI------- 1008
Query: 169 LGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFP 228
+ D TW+GMI Y G ++ N
Sbjct: 1009 --------------------KPDLVTWNGMISGYAMWG-----------CARKAFMPNSA 1037
Query: 229 SLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNF 288
S+ +L CASL+ L G+++H +R F DV+VA+ LI MY K L +F
Sbjct: 1038 SITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRRI 1097
Query: 289 ASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGR 348
+K + WN +I G+A +GLG++++ VF+EM GV PD +T +LSAC +G + EG
Sbjct: 1098 QNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACKNSGLIGEGW 1157
Query: 349 EIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRT 408
+ F+SM + Y + P+ EHY CMVDLLGRAG +++A LI MP +PDA IWG+LLG+CR
Sbjct: 1158 KYFDSMITDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIHTMPLKPDATIWGALLGSCRI 1217
Query: 409 HMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCS 468
H L AE AAK L +LEP N+ YIL+ N+Y+ R+ D+ LR+ M V S
Sbjct: 1218 HKNLXFAETAAKNLFKLEPNNSANYILMMNLYSIFNRWEDMDHLRELMGAAGVRNRQVWS 1277
Query: 469 WIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHS 528
WI++ ++VH+F+ D HP+ I L ++ +++ GY PD + V ++DE EK
Sbjct: 1278 WIQINQRVHVFSS-DEKPHPDAGKIYFELYQLVSEMKKLGYVPDVNCVYQNMDEVEKQKI 1336
Query: 529 LRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHH 588
L H+EKLA+ YGL+K+ G PIRV+KN R+C DCHSA K IS V RE+ LRD RFHH
Sbjct: 1337 LLSHTEKLAITYGLIKMKAGEPIRVIKNTRICSDCHSAAKYISLVKARELFLRDGVRFHH 1396
Query: 589 FKDGLCSCRDYW 600
F++G CSC D+W
Sbjct: 1397 FREGKCSCNDFW 1408
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 111/452 (24%), Positives = 200/452 (44%), Gaps = 92/452 (20%)
Query: 22 ITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQD 81
+ +A +F +MP + W + ++ ++ LF M + A+T ++ Q
Sbjct: 725 LEKANQVFHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQA 784
Query: 82 ----GRVDEGREI----FDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSW 133
G ++ ++I F +V +IS Y N ++++AR++F+ M +N SW
Sbjct: 785 CGKMGALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSMENRNTSSW 844
Query: 134 TAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDA 193
+M+ Y G + DAW LF + S+ M + D
Sbjct: 845 NSMISSYAALGFLNDAWSLFYEL------ESSDM---------------------KPDIV 877
Query: 194 TWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQL 253
TW+ ++ + GY+ EV+++ MQ EG + N S+ SVL + L L+ G++ H +
Sbjct: 878 TWNCLLSGHFLHGYKEEVLNILQRMQGEGFKPNSSSMTSVLQAISELGFLNMGKETHGYV 937
Query: 254 VRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSL 313
+R FD DVYV + LI MY+K L + +FDN +++I WNS++SGY+ G+ E +L
Sbjct: 938 LRNGFDCDVYVGTSLIDMYVKNHSLXSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDAL 997
Query: 314 KVFHEMFSSGVMPDDVTLVGVLS------------------------ACSYTGKVKEGRE 349
++ ++M G+ PD VT G++S AC+ +++G+E
Sbjct: 998 RLLNQMEKEGIKPDLVTWNGMISGYAMWGCARKAFMPNSASITCLLRACASLSLLQKGKE 1057
Query: 350 IF-------------------------ESMKSKYLVEPKTEH-----YACMVDLLGRAGQ 379
I S+K+ + V + ++ + CM+ G
Sbjct: 1058 IHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRRIQNKTLASWNCMIMGFAIFGL 1117
Query: 380 VEDAMKLIEAMP---FEPDAIIWGSLLGACRT 408
++A+ + M PDAI + +LL AC+
Sbjct: 1118 GKEAISVFNEMQKVGVGPDAITFTALLSACKN 1149
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 90/413 (21%), Positives = 181/413 (43%), Gaps = 17/413 (4%)
Query: 69 VAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN-NRIDVARKLFEVMPE 127
A N++ Y G +F +N + W + + + ++ + + ++F+ +
Sbjct: 608 AAAKNLISSYLGFGDFWSAAMVFYVGLPRNYLKWNSFVEEFKSSAGSLHIVLEVFKELHG 667
Query: 128 KNEVSWTAML-MGYTQCGRIQDAW---ELFKAMPMK----SVVASNSMILGLGQNGEVQK 179
K V + + + C R+ D W E+ + + V +++ G+ ++K
Sbjct: 668 KGVVFDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEK 727
Query: 180 ARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCAS 239
A VF +M + W+ I + + + ++LF MQ ++ +++ VL C
Sbjct: 728 ANQVFHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQACGK 787
Query: 240 LASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSI 299
+ +L+ +Q+H + R D DV + + LI+MY K G+L + +FD+ +++ WNS+
Sbjct: 788 MGALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSMENRNTSSWNSM 847
Query: 300 ISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYL 359
IS YA G + +F+E+ SS + PD VT +LS G +E I + M+ +
Sbjct: 848 ISSYAALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQRMQGEGF 907
Query: 360 VEPKTEHYACMVDLLGRAGQV---EDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAE 416
+P + ++ + G + ++ + F+ D + SL+ + L A+
Sbjct: 908 -KPNSSSMTSVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLXSAQ 966
Query: 417 VAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSW 469
++ +N + L + Y+ +G F D L M K IKP +W
Sbjct: 967 AVFD---NMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEG-IKPDLVTW 1015
>gi|227463000|gb|ACP39952.1| pentatricopeptide repeat protein [Gossypium hirsutum]
gi|227463002|gb|ACP39953.1| pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 592
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 215/548 (39%), Positives = 325/548 (59%), Gaps = 34/548 (6%)
Query: 74 MVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSW 133
+ Y + R +F +PK + + ++I+ + K P+++ + +
Sbjct: 58 LSFAYAAASPISYTRRLFFSIPKPDTFLFHSLIT---------LTSKF--SFPQESLLCY 106
Query: 134 TAMLMG------YTQCGRIQDAWELFKAMPMKSVVASNSMILGLG--------------Q 173
ML+ YT I+ + +L A + + + I G G +
Sbjct: 107 RRMLLANISSSNYTFSAVIKSSADL-TAFSIGETIHCHVYICGYGLDAYVQAALVSFYAK 165
Query: 174 NGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISV 233
+G V AR VFD+M EK W+ MI YE+ G+ E ++LF LMQ GV+ + + +S+
Sbjct: 166 SGHVMIARKVFDKMPEKTVVAWNSMISGYEQNGFGKEAVELFFLMQDLGVKPDSSTFVSL 225
Query: 234 LSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDI 293
LS CA + ++ G VH + R FD++V + + L+ MY +CG + K + +FD+ K+I
Sbjct: 226 LSACAQVGAIGLGFWVHEYIARNCFDLNVVLGTALMNMYSRCGNVSKAREVFDSMEEKNI 285
Query: 294 VMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFES 353
V W ++ISGY +G G +++++F+EM G P++VT V VLSAC++ G V EGR+IF +
Sbjct: 286 VAWTAMISGYGMHGHGSQAIELFNEMSFDGPRPNNVTFVAVLSACAHAGLVDEGRQIFTT 345
Query: 354 MKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIE-AMPFEPDAIIWGSLLGACRTHMKL 412
MK +Y + P EH CMVD+LGRAG + +A + I+ P EP +W ++LGAC+ H
Sbjct: 346 MKQEYGLVPSVEHQVCMVDMLGRAGHLNEAYQFIKNTSPKEPAPAVWTAMLGACKMHKNF 405
Query: 413 DLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEV 472
DL A+ LL +EP+N G Y++LSNIYA GR V ++R M + + K G S I+V
Sbjct: 406 DLGVEVAEHLLSIEPENPGHYVMLSNIYALAGRMDRVEKIRNIMIRNRLKKEVGYSTIDV 465
Query: 473 EKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYH 532
+ KV++F+ D SHP+ I L+++ REAGY P S V+H+V+EEE+ ++LRYH
Sbjct: 466 DHKVYLFSMGD-KSHPKTNQIYLYLDELMSRCREAGYIPASESVMHEVEEEEREYALRYH 524
Query: 533 SEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDG 592
SEKLA+A+GL+K GV IR++KNLR+C DCH+AIK IS + REI +RD RFHHFKDG
Sbjct: 525 SEKLAIAFGLLKTGSGVAIRIVKNLRMCEDCHTAIKYISIIANREINVRDRLRFHHFKDG 584
Query: 593 LCSCRDYW 600
CSC+DYW
Sbjct: 585 SCSCQDYW 592
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 105/224 (46%), Gaps = 31/224 (13%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV----------VSWTVMLG----G 46
MPE+ VV+W +M+ GY + G EA LF+ M + V +S +G G
Sbjct: 179 MPEKTVVAWNSMISGYEQNGFGKEAVELFFLMQDLGVKPDSSTFVSLLSACAQVGAIGLG 238
Query: 47 FIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMI 106
F I AR FD+ +VV T ++ Y + G V + RE+FD M +KN+++WT MI
Sbjct: 239 FWVHEYI--ARNCFDL----NVVLGTALMNMYSRCGNVSKAREVFDSMEEKNIVAWTAMI 292
Query: 107 SGYVNNNRIDVARKLFEVM----PEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMK--- 159
SGY + A +LF M P N V++ A+L G + + ++F M +
Sbjct: 293 SGYGMHGHGSQAIELFNEMSFDGPRPNNVTFVAVLSACAHAGLVDEGRQIFTTMKQEYGL 352
Query: 160 --SVVASNSMILGLGQNGEVQKARVVFDQM--REKDDATWSGMI 199
SV M+ LG+ G + +A +E A W+ M+
Sbjct: 353 VPSVEHQVCMVDMLGRAGHLNEAYQFIKNTSPKEPAPAVWTAML 396
>gi|296090522|emb|CBI40853.3| unnamed protein product [Vitis vinifera]
Length = 749
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 214/605 (35%), Positives = 359/605 (59%), Gaps = 19/605 (3%)
Query: 12 MVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFD-MMPEK---- 66
++ Y++ G + A +F ++P +++V+W M+ +IR+ R +A ++ M+P+
Sbjct: 117 LIDAYLKCGSVVYARKVFDEVPHRHIVAWNSMIASYIRNGRSKEAIDIYQRMVPDGILPD 176
Query: 67 ----DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLF 122
V + LG +G+ G+ + + NV + ++ Y ++ AR +
Sbjct: 177 EFTFSSVFKAFSDLGLVHEGQRAHGQSVVLGVGVSNVFVGSALVDMYAKFGKMRDARLVS 236
Query: 123 EVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVAS----NSMILGLGQNGEVQ 178
+ + K+ V +TA+++GY+ G ++ ++F+ M K + A+ +S+++ G ++
Sbjct: 237 DQVVGKDVVLFTALIVGYSHHGEDGESLQVFRNMTKKGIEANEYTLSSVLVCCGNLEDLT 296
Query: 179 KARVVFDQMRE---KDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLS 235
R++ + + + TW+ +I + G E + F M + + N +L SVL
Sbjct: 297 SGRLIHGLIVKAGLESAVTWTSVIVGLVQNGREEIALLKFRQMLRSSITPNSFTLSSVLR 356
Query: 236 VCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVM 295
C+SLA L+ G+Q+HA +++ D+D YV + LI Y KCG + +F+ D+V
Sbjct: 357 ACSSLAMLEQGKQIHAIVMKFGLDIDKYVGAALIDFYGKCGSTEIARSVFNGLLEVDVVS 416
Query: 296 WNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMK 355
NS+I YAQ G G ++L++F M +G+ P++VT +GVLSAC+ G ++EG IF S +
Sbjct: 417 VNSMIYSYAQNGFGHEALQLFSGMKDTGLEPNNVTWLGVLSACNNAGLLEEGCHIFSSAR 476
Query: 356 SKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLA 415
+ +E +HYACMVDLLGRAG++++A LI + D +IW +LL ACR H +++A
Sbjct: 477 NSGNIELTKDHYACMVDLLGRAGRLKEAEMLINQVNIS-DVVIWRTLLSACRIHGDVEMA 535
Query: 416 EVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKK 475
+ +++ L P++ G ++LLSN+YAS G + V E++ MR+ + K P SW++VE++
Sbjct: 536 KRVMNRVIDLAPEDGGTHVLLSNLYASTGNWSKVIEMKSAMREMRLKKNPAMSWVDVERE 595
Query: 476 VHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEK 535
+H F D SHP I LE++ ++E GY PD+ FVL D+DEE+K+ SL YHSEK
Sbjct: 596 IHTFMAGDW-SHPNFRDIREKLEELIEKVKELGYVPDTRFVLQDLDEEKKIRSLYYHSEK 654
Query: 536 LAVAYGLVKLP-EGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLC 594
LAVA+ L + + IR++KNLRVCGDCH+ +K +SK++GR+II RD RFHHF++GLC
Sbjct: 655 LAVAFALWRSNYKNTTIRILKNLRVCGDCHTWMKFVSKIVGRDIIARDVKRFHHFRNGLC 714
Query: 595 SCRDY 599
SC DY
Sbjct: 715 SCGDY 719
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 120/248 (48%), Gaps = 6/248 (2%)
Query: 165 NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVR 224
N +I + G V AR VFD++ + W+ MI Y R G E ID++ M +G+
Sbjct: 115 NKLIDAYLKCGSVVYARKVFDEVPHRHIVAWNSMIASYIRNGRSKEAIDIYQRMVPDGIL 174
Query: 225 VNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDV-DVYVASVLITMYIKCGELVKGKL 283
+ + SV + L + G++ H Q V V +V+V S L+ MY K G++ +L
Sbjct: 175 PDEFTFSSVFKAFSDLGLVHEGQRAHGQSVVLGVGVSNVFVGSALVDMYAKFGKMRDARL 234
Query: 284 IFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGK 343
+ D KD+V++ ++I GY+ +G +SL+VF M G+ ++ TL VL C
Sbjct: 235 VSDQVVGKDVVLFTALIVGYSHHGEDGESLQVFRNMTKKGIEANEYTLSSVLVCCGNLED 294
Query: 344 VKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAM---PFEPDAIIWG 400
+ GR + + K +E + +V L+ + G+ E A+ M P++
Sbjct: 295 LTSGR-LIHGLIVKAGLESAVTWTSVIVGLV-QNGREEIALLKFRQMLRSSITPNSFTLS 352
Query: 401 SLLGACRT 408
S+L AC +
Sbjct: 353 SVLRACSS 360
>gi|449458534|ref|XP_004147002.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 989
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 215/645 (33%), Positives = 342/645 (53%), Gaps = 48/645 (7%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDM 62
E N +V Y + G+ +A +F + + ++V W+ ++ + + +++ +LF +
Sbjct: 346 EGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHL 405
Query: 63 MPEKDVVAQ----TNMVLGYCQDGRVDEGREIFDEMPK----KNVISWTTMISGYVNNNR 114
M D + +++ G + G+ I + K +V +++ Y+ N
Sbjct: 406 MRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGC 465
Query: 115 IDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAM----------PMKSVVAS 164
+ KL+E M +++ +SW A L G CG +F M S++ S
Sbjct: 466 VHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGS 525
Query: 165 NSMILGLGQNGEV-----------------------------QKARVVFDQMREKDDATW 195
S + + +V + A V F+++ +D TW
Sbjct: 526 CSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTW 585
Query: 196 SGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVR 255
+ +I Y + + ++ F MQ+EGV+ N +L LS C+SLASL+ G+Q+H+ + +
Sbjct: 586 TVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFK 645
Query: 256 CQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKV 315
D++V S L+ MY KCG + + + +F+ +D + WN+II GYAQ G G K+L
Sbjct: 646 SGHVSDMFVGSALVDMYAKCGCMEEAEALFEALIRRDTIAWNTIICGYAQNGQGNKALTA 705
Query: 316 FHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLG 375
F M G+ PD VT G+LSACS+ G V+EG+E F SM + + P +H ACMVD+LG
Sbjct: 706 FRMMLDEGISPDGVTFTGILSACSHQGLVEEGKEHFNSMYRDFGISPTVDHCACMVDILG 765
Query: 376 RAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYIL 435
R G+ ++ I+ M +A+IW ++LGA + H L L E AA KL +L+P+ YIL
Sbjct: 766 RVGKFDELEDFIQKMQLSQNALIWETVLGASKMHNNLVLGEKAANKLFELQPEEESSYIL 825
Query: 436 LSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMR 495
LSNI+A++GR+ DV +R M + V K PGCSW+E +VH F D SHP+ I
Sbjct: 826 LSNIFATEGRWDDVKRVRSLMSSKGVKKEPGCSWVEANGQVHTFVSHD-YSHPQIQEIHL 884
Query: 496 MLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMK 555
L+++ L Y P + +VLH+V E EK +LR+HSE+LA+ + L+ IR+ K
Sbjct: 885 KLDELDRELASIQYVPKTEYVLHNVGETEKKENLRFHSERLALGFALISTSSEKKIRIFK 944
Query: 556 NLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
NLR+C DCH +K IS + +EI++RD RFHHFK+G CSC D+W
Sbjct: 945 NLRICRDCHDVMKHISSITNQEIVVRDVRRFHHFKNGACSCNDFW 989
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 104/403 (25%), Positives = 199/403 (49%), Gaps = 25/403 (6%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MP+R+VVSWTA+++G V EG ++ LF +M + ++ L ++ + A L
Sbjct: 173 MPDRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLG 232
Query: 61 DMMPEK--------DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
M + D+ + +V Y + G ++ ++F MP++N ++W +++GY
Sbjct: 233 KQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQR 292
Query: 113 NRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMI 168
+ KLF M E NE + T +L G ++ ++ ++ +K N I
Sbjct: 293 GDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQG-QVIHSLIIKCGYEGNEFI 351
Query: 169 LGLG------QNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEG 222
G G + G A VF +++ D WS +I +++G E I LF LM+
Sbjct: 352 -GCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGD 410
Query: 223 VRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGK 282
N ++ S+LS + +L +G+ +HA + + F+ DV V++ L+TMY+K G + G
Sbjct: 411 TLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGT 470
Query: 283 LIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTG 342
++++ +D++ WN+ +SG G+ ++ L +F+ M G +P+ T + +L +CS
Sbjct: 471 KLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLF 530
Query: 343 KVKEGREIFESMKSKYLVEPKTEHYAC--MVDLLGRAGQVEDA 383
V GR++ + L + ++ C ++D+ + +EDA
Sbjct: 531 DVHYGRQVHAHIIKNQLDD---NNFVCTALIDMYAKCMYLEDA 570
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 90/327 (27%), Positives = 165/327 (50%), Gaps = 10/327 (3%)
Query: 87 GREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEK----NEVSWTAMLMGYTQ 142
R + +MP ++V+SWT +I G V + + LF+ M + NE + L +
Sbjct: 166 ARLVLAKMPDRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSL 225
Query: 143 CGRI----QDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGM 198
C + Q + FK + + ++++ + GE++ A +F M E++D TW+ +
Sbjct: 226 CMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVL 285
Query: 199 IKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQF 258
+ Y ++G V+ LF M + V+ N +L +VL CA+ +L G+ +H+ +++C +
Sbjct: 286 LNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGY 345
Query: 259 DVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHE 318
+ + ++ L+ MY KCG + +F DIV+W+++I+ Q G E+S+K+FH
Sbjct: 346 EGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHL 405
Query: 319 MFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAG 378
M +P+ T+ +LSA + TG ++ G+ I + KY E +V + + G
Sbjct: 406 MRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVW-KYGFETDVAVSNALVTMYMKNG 464
Query: 379 QVEDAMKLIEAMPFEPDAIIWGSLLGA 405
V D KL E+M + D I W + L
Sbjct: 465 CVHDGTKLYESM-VDRDLISWNAYLSG 490
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 88/175 (50%), Gaps = 4/175 (2%)
Query: 232 SVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASK 291
S+L CAS SL + +H +V+ + D ++ L+ +Y KC +L+ +
Sbjct: 117 SMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMPDR 176
Query: 292 DIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIF 351
D+V W ++I G G S+ +F EM + G+MP++ TL L ACS + G+++
Sbjct: 177 DVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQMH 236
Query: 352 -ESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
++ K L++ + +VDL + G++E A K+ MP E + + W LL
Sbjct: 237 AQAFKLGLLLDLFVG--SALVDLYAKCGEIELASKMFIGMP-EQNDVTWNVLLNG 288
>gi|302791701|ref|XP_002977617.1| hypothetical protein SELMODRAFT_106776 [Selaginella moellendorffii]
gi|300154987|gb|EFJ21621.1| hypothetical protein SELMODRAFT_106776 [Selaginella moellendorffii]
Length = 805
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 234/642 (36%), Positives = 339/642 (52%), Gaps = 54/642 (8%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEK-NVVSWTVMLGGFIRDSRIDDARRLFDMMPE--- 65
+A+V Y G + +A LF + +VV W M+ ++ +A +F M +
Sbjct: 167 SALVSMYGRCGSLRDANALFGHLERHLDVVLWNAMITANSQNGSPREALEIFYRMLQLGI 226
Query: 66 -KDVVAQTNMVLGYCQDG------RVDEGREIFDEMP-KKNVISWTTMISGYVNNNRIDV 117
D+V + V C +V DE +V+ T +++ Y ID
Sbjct: 227 PPDLVTFVS-VFKACSSSPSLRASQVKGFHACLDETGLGSDVVVATALVNAYARCGEIDC 285
Query: 118 ARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGE- 176
ARK F MPE+N VSWT+M+ +TQ G + A E F AM ++ VV + S + + E
Sbjct: 286 ARKFFAEMPERNAVSWTSMIAAFTQIGHLL-AVETFHAMLLEGVVPTRSTLFAALEGCED 344
Query: 177 ----------VQKARVVFD------------------------QMREK---DDATWSGMI 199
Q+ VV D RE+ D A + MI
Sbjct: 345 LRVARLVEAIAQEIGVVTDVAIVTDLVMAYARCDGQEDAIRVFSAREEGEWDAALVTAMI 404
Query: 200 KVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVR-CQF 258
VY + L+ + G+ + I+ L CASLA+L GRQ+HA + +
Sbjct: 405 AVYAQCRDRRSTFKLWGAAIERGISPDRILYITALDACASLAALSEGRQIHACVAADRRL 464
Query: 259 DVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHE 318
D DV + + +++MY +CG L + FD ++D + WN+++S AQ+G E +F
Sbjct: 465 DRDVTLGNAIVSMYGQCGSLRDARDAFDGMPARDEISWNAMLSASAQHGRVEDCCDLFRA 524
Query: 319 MFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAG 378
M G + + + +LSAC++ G VK G E F +M + V P TEHY CMVDLLGR G
Sbjct: 525 MLQEGFDAERIAFLNLLSACAHAGLVKAGCEHFSAMTGDHGVVPATEHYGCMVDLLGRKG 584
Query: 379 QVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSN 438
++ DA +++AMP PDA W +L+GACR + + AA+++L+L + Y+ L N
Sbjct: 585 RLADAHGIVQAMPVPPDAATWMALMGACRIYGDTERGRFAAERVLELRADHTAAYVALCN 644
Query: 439 IYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLE 498
IY++ GR+ D A +RK M + K PG S IE+ KVH F RD SHP+ I LE
Sbjct: 645 IYSAAGRWDDAAAVRKIMADLGLRKIPGVSSIEIRSKVHEFVVRD-RSHPQSEAIYAELE 703
Query: 499 KIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLR 558
++ G + AGY + VLHDV+EE+K LR+HSEKLA+A+G++ P+G +RV+KNLR
Sbjct: 704 RVMGAIERAGYRAVTGEVLHDVEEEQKEQLLRFHSEKLAIAFGMMSTPQGSTLRVIKNLR 763
Query: 559 VCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
VC DCH+A K ISKV GREI++RD RFHHFKDG CSC DYW
Sbjct: 764 VCVDCHNASKFISKVFGREIVVRDVRRFHHFKDGACSCGDYW 805
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 125/244 (51%), Gaps = 3/244 (1%)
Query: 164 SNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGV 223
++S++ + G ++ A VF ++ K W+ +I Y +G+ I LF + +EG+
Sbjct: 65 ASSLVYMYLRCGSLESAIDVFHKIAHKSIVLWTVLISAYVSRGHSAAAIALFHRILQEGI 124
Query: 224 RVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKL 283
++ +SVLS C+S L GR +H V + VAS L++MY +CG L
Sbjct: 125 ALDAIVFVSVLSACSSEEFLAAGRLIHRCAVEAGLGLQEIVASALVSMYGRCGSLRDANA 184
Query: 284 IFDNFASK-DIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTG 342
+F + D+V+WN++I+ +Q G ++L++F+ M G+ PD VT V V ACS +
Sbjct: 185 LFGHLERHLDVVLWNAMITANSQNGSPREALEIFYRMLQLGIPPDLVTFVSVFKACSSSP 244
Query: 343 KVKEGR-EIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGS 401
++ + + F + + + +V+ R G+++ A K MP E +A+ W S
Sbjct: 245 SLRASQVKGFHACLDETGLGSDVVVATALVNAYARCGEIDCARKFFAEMP-ERNAVSWTS 303
Query: 402 LLGA 405
++ A
Sbjct: 304 MIAA 307
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 135/285 (47%), Gaps = 14/285 (4%)
Query: 66 KDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVM 125
+D +++V Y + G ++ ++F ++ K+++ WT +IS YV+ A LF +
Sbjct: 60 RDGYLASSLVYMYLRCGSLESAIDVFHKIAHKSIVLWTVLISAYVSRGHSAAAIALFHRI 119
Query: 126 PEK----NEVSWTAMLMG-----YTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGE 176
++ + + + ++L + GR+ + + ++ +VAS +++ G+ G
Sbjct: 120 LQEGIALDAIVFVSVLSACSSEEFLAAGRLIHRCAVEAGLGLQEIVAS-ALVSMYGRCGS 178
Query: 177 VQKARVVFDQM-REKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLS 235
++ A +F + R D W+ MI + G E +++F M + G+ + + +SV
Sbjct: 179 LRDANALFGHLERHLDVVLWNAMITANSQNGSPREALEIFYRMLQLGIPPDLVTFVSVFK 238
Query: 236 VCASLASL--DHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDI 293
C+S SL + HA L DV VA+ L+ Y +CGE+ + F ++
Sbjct: 239 ACSSSPSLRASQVKGFHACLDETGLGSDVVVATALVNAYARCGEIDCARKFFAEMPERNA 298
Query: 294 VMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSAC 338
V W S+I+ + Q G +++ FH M GV+P TL L C
Sbjct: 299 VSWTSMIAAFTQIG-HLLAVETFHAMLLEGVVPTRSTLFAALEGC 342
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 70/145 (48%), Gaps = 1/145 (0%)
Query: 261 DVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMF 320
D Y+AS L+ MY++CG L +F A K IV+W +IS Y G ++ +FH +
Sbjct: 61 DGYLASSLVYMYLRCGSLESAIDVFHKIAHKSIVLWTVLISAYVSRGHSAAAIALFHRIL 120
Query: 321 SSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQV 380
G+ D + V VLSACS + GR I L + A +V + GR G +
Sbjct: 121 QEGIALDAIVFVSVLSACSSEEFLAAGRLIHRCAVEAGLGLQEIVASA-LVSMYGRCGSL 179
Query: 381 EDAMKLIEAMPFEPDAIIWGSLLGA 405
DA L + D ++W +++ A
Sbjct: 180 RDANALFGHLERHLDVVLWNAMITA 204
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 83/363 (22%), Positives = 133/363 (36%), Gaps = 92/363 (25%)
Query: 1 MPERNVVSWTAMVRGYVE---------------EGMITEAGTLFWQM------------- 32
MPERN VSWT+M+ + + EG++ TLF +
Sbjct: 293 MPERNAVSWTSMIAAFTQIGHLLAVETFHAMLLEGVVPTRSTLFAALEGCEDLRVARLVE 352
Query: 33 ---PEKNVVS----WTVMLGGFIRDSRIDDARRLFDMMPEK--DVVAQTNMVLGY--CQD 81
E VV+ T ++ + R +DA R+F E D T M+ Y C+D
Sbjct: 353 AIAQEIGVVTDVAIVTDLVMAYARCDGQEDAIRVFSAREEGEWDAALVTAMIAVYAQCRD 412
Query: 82 GR---------------------------------VDEGREIF-----DEMPKKNVISWT 103
R + EGR+I D ++V
Sbjct: 413 RRSTFKLWGAAIERGISPDRILYITALDACASLAALSEGRQIHACVAADRRLDRDVTLGN 472
Query: 104 TMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVA 163
++S Y + AR F+ MP ++E+SW AML Q GR++D +LF+AM + A
Sbjct: 473 AIVSMYGQCGSLRDARDAFDGMPARDEISWNAMLSASAQHGRVEDCCDLFRAMLQEGFDA 532
Query: 164 SNSMILGL----GQNGEVQKARVVFDQMREKDDAT-----WSGMIKVYERKGYELEVIDL 214
L L G V+ F M + M+ + RKG + D
Sbjct: 533 ERIAFLNLLSACAHAGLVKAGCEHFSAMTGDHGVVPATEHYGCMVDLLGRKG---RLADA 589
Query: 215 FTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFD-VDVYVASVLITMYI 273
++Q V + + ++++ C + GR +++ + D YVA L +Y
Sbjct: 590 HGIVQAMPVPPDAATWMALMGACRIYGDTERGRFAAERVLELRADHTAAYVA--LCNIYS 647
Query: 274 KCG 276
G
Sbjct: 648 AAG 650
>gi|297743898|emb|CBI36868.3| unnamed protein product [Vitis vinifera]
Length = 541
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 203/441 (46%), Positives = 278/441 (63%), Gaps = 7/441 (1%)
Query: 165 NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGV- 223
S+I +G V AR +F M E++ +WS MI Y R G E + LF MQ GV
Sbjct: 103 TSLISMYSSSGLVDMARNLFAVMPERNVISWSCMINGYVRCGQYKEALALFREMQMLGVN 162
Query: 224 --RVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKG 281
R N ++ VL+ C L +L+HG+ HA + +C VDV + + LI MY KCG + K
Sbjct: 163 DVRPNEFTMSGVLAACGRLGALEHGKWAHAYIDKCGMPVDVVLGTALIDMYAKCGSVEKA 222
Query: 282 KLIFDNFA-SKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSY 340
+F N +KD++ W+++ISG A +GL E+ + +F +M + GV P+ VT + V AC +
Sbjct: 223 TWVFSNLGPNKDVMAWSAMISGLAMHGLAEECVGLFSKMINQGVRPNAVTFLAVFCACVH 282
Query: 341 TGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWG 400
G V EG++ M Y + P +HY CMVDL GRAG++++A ++++MP EPD ++WG
Sbjct: 283 GGLVSEGKDYLRRMTEDYSIIPTIQHYGCMVDLYGRAGRIKEAWNVVKSMPMEPDVLVWG 342
Query: 401 SLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRN 460
+LL R H ++ E+A KKL++LEP N+G Y+LLSN+YA +GR+ DV +R M
Sbjct: 343 ALLSGSRMHGDIETCELALKKLIELEPTNSGAYVLLSNVYAKRGRWEDVRHVRDLMETMG 402
Query: 461 VIKPPGCSWIEVEKKVH-MFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHD 519
+ K PGCS IEV +H F G D SHPE I MLE+I L+ GY ++ VL D
Sbjct: 403 IKKVPGCSLIEVGGVLHEFFVGDD--SHPETRQIHMMLEEILERLKVEGYVGNTKEVLLD 460
Query: 520 VDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREII 579
+DEE K +L HSEKLA+AYG +K G PIR++KNLR+C DCH AIK+ISKV REII
Sbjct: 461 LDEEGKELALSLHSEKLALAYGFLKTSPGTPIRIVKNLRICRDCHVAIKMISKVFDREII 520
Query: 580 LRDANRFHHFKDGLCSCRDYW 600
+RD NRFHHF GLCSCRDYW
Sbjct: 521 VRDCNRFHHFTQGLCSCRDYW 541
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 116/259 (44%), Gaps = 22/259 (8%)
Query: 67 DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMP 126
D QT+++ Y G VD R +F MP++NVISW+ MI+GYV + A LF M
Sbjct: 98 DPFVQTSLISMYSSSGLVDMARNLFAVMPERNVISWSCMINGYVRCGQYKEALALFREMQ 157
Query: 127 -------EKNEVSWTAML-----MGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQN 174
NE + + +L +G + G+ A+ MP+ VV ++I +
Sbjct: 158 MLGVNDVRPNEFTMSGVLAACGRLGALEHGKWAHAYIDKCGMPV-DVVLGTALIDMYAKC 216
Query: 175 GEVQKARVVFDQM-REKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISV 233
G V+KA VF + KD WS MI G E + LF+ M +GVR N + ++V
Sbjct: 217 GSVEKATWVFSNLGPNKDVMAWSAMISGLAMHGLAEECVGLFSKMINQGVRPNAVTFLAV 276
Query: 234 LSVCASLASLDHGRQVHAQLVRCQFDVDVYVA----SVLITMYIKCGELVKGKLIFDNFA 289
C + G+ L R D + ++ +Y + G + + + +
Sbjct: 277 FCACVHGGLVSEGKD---YLRRMTEDYSIIPTIQHYGCMVDLYGRAGRIKEAWNVVKSMP 333
Query: 290 -SKDIVMWNSIISGYAQYG 307
D+++W +++SG +G
Sbjct: 334 MEPDVLVWGALLSGSRMHG 352
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 109/223 (48%), Gaps = 9/223 (4%)
Query: 195 WSGMIKVY-----ERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQV 249
W+ +I+ + + G I +F M+ GV+ +F + +L AS + L GR V
Sbjct: 27 WNTLIRAHVQARAQPTGPTHSPISIFVRMRFHGVQPDFHTFPFLLQSFASPSLLHLGRSV 86
Query: 250 HAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLG 309
HAQ++R +D +V + LI+MY G + + +F ++++ W+ +I+GY + G
Sbjct: 87 HAQILRFGLAIDPFVQTSLISMYSSSGLVDMARNLFAVMPERNVISWSCMINGYVRCGQY 146
Query: 310 EKSLKVFHEMFSSG---VMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEH 366
+++L +F EM G V P++ T+ GVL+AC G ++ G+ + K +
Sbjct: 147 KEALALFREMQMLGVNDVRPNEFTMSGVLAACGRLGALEHGKWA-HAYIDKCGMPVDVVL 205
Query: 367 YACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTH 409
++D+ + G VE A + + D + W +++ H
Sbjct: 206 GTALIDMYAKCGSVEKATWVFSNLGPNKDVMAWSAMISGLAMH 248
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/336 (22%), Positives = 135/336 (40%), Gaps = 92/336 (27%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF--------- 60
T+++ Y G++ A LF MPE+NV+SW+ M+ G++R + +A LF
Sbjct: 103 TSLISMYSSSGLVDMARNLFAVMPERNVISWSCMINGYVRCGQYKEALALFREMQMLGVN 162
Query: 61 DMMPEK---------------------------------DVVAQTNMVLGYCQDGRVDEG 87
D+ P + DVV T ++ Y + G V++
Sbjct: 163 DVRPNEFTMSGVLAACGRLGALEHGKWAHAYIDKCGMPVDVVLGTALIDMYAKCGSVEKA 222
Query: 88 REIFDEM-PKKNVISWTTMISGYVNNNRIDVARKLFEVMPEK----NEVSWTAMLMG--- 139
+F + P K+V++W+ MISG + + LF M + N V++ A+
Sbjct: 223 TWVFSNLGPNKDVMAWSAMISGLAMHGLAEECVGLFSKMINQGVRPNAVTFLAVFCACVH 282
Query: 140 ---------------------------------YTQCGRIQDAWELFKAMPMK-SVVASN 165
Y + GRI++AW + K+MPM+ V+
Sbjct: 283 GGLVSEGKDYLRRMTEDYSIIPTIQHYGCMVDLYGRAGRIKEAWNVVKSMPMEPDVLVWG 342
Query: 166 SMILGLGQNGEVQKARVVFDQMRE---KDDATWSGMIKVYERKGYELEVIDLFTLMQKEG 222
+++ G +G+++ + ++ E + + + VY ++G +V + LM+ G
Sbjct: 343 ALLSGSRMHGDIETCELALKKLIELEPTNSGAYVLLSNVYAKRGRWEDVRHVRDLMETMG 402
Query: 223 V-RVNFPSLISVLSVCASLASLDHG----RQVHAQL 253
+ +V SLI V V D RQ+H L
Sbjct: 403 IKKVPGCSLIEVGGVLHEFFVGDDSHPETRQIHMML 438
>gi|359495599|ref|XP_003635033.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic-like [Vitis vinifera]
Length = 650
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 215/562 (38%), Positives = 329/562 (58%), Gaps = 22/562 (3%)
Query: 53 IDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
ID A R+F +V T ++ G+ G E +++ M ++++ +++ +
Sbjct: 97 IDYASRIFQYTHNPNVYLYTALIDGFVSSGNYLEAIQLYSRMLHESILPDNYLMASILKA 156
Query: 113 NRIDVARKLFEVMPEKNEVSWTAMLMG--------------YTQCGRIQDAWELFKAMPM 158
+A + E EV A+ +G Y +CG + DA +F+ MP
Sbjct: 157 CGSQLA------LREGREVHSRALKLGFSSNRLVRLRIMELYGKCGELGDARRVFEEMP- 209
Query: 159 KSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLM 218
+ VVAS MI G V++A VF ++R KD W+ MI + R ++ F M
Sbjct: 210 EDVVASTVMISSYSDQGLVEEAGAVFSRVRRKDTVCWTAMIDGFVRNEETNRALEAFRGM 269
Query: 219 QKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGEL 278
Q E VR N +++ VLS C+ L +L+ GR VH+ + + + +++++V + LI MY +CG +
Sbjct: 270 QGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFEIELNLFVGNALINMYSRCGSI 329
Query: 279 VKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSAC 338
+ + +FD +D++ +N++ISG + G +++++F M + P +VT VGVL+AC
Sbjct: 330 DEAQTVFDEMKDRDVITYNTMISGLSMNGKSRQAIELFRVMVGRRLRPTNVTFVGVLNAC 389
Query: 339 SYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAII 398
S+ G V G EIF SM Y VEP+ EHY CMVDLLGR G++E+A LI M PD I+
Sbjct: 390 SHGGLVDFGFEIFHSMARDYRVEPQIEHYGCMVDLLGRVGRLEEAYDLIRTMKMTPDHIM 449
Query: 399 WGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRK 458
G+LL AC+ H L+L E AK+L ++G Y+LLS++YAS G++ + A++R M++
Sbjct: 450 LGTLLSACKMHKNLELGEQVAKELEDRGQADSGTYVLLSHVYASSGKWKEAAQVRAKMKE 509
Query: 459 RNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLH 518
+ K PGCS IEV ++H F D + HP+ I LE++ LLR GY P+ VL
Sbjct: 510 AGMQKEPGCSSIEVNNEIHEFLLGD-LRHPQKERIYEKLEELNRLLRLEGYHPEKEVVLQ 568
Query: 519 DVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREI 578
D+++ EK +L HSE+LA+ YGL+ IRVMKNLRVC DCHSAIKLI+K+ R+I
Sbjct: 569 DIEDGEKEWALAMHSERLAICYGLISTEPCTMIRVMKNLRVCYDCHSAIKLIAKITRRKI 628
Query: 579 ILRDANRFHHFKDGLCSCRDYW 600
++RD NRFH+F++G CSC DYW
Sbjct: 629 VVRDRNRFHYFENGACSCGDYW 650
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 93/400 (23%), Positives = 172/400 (43%), Gaps = 51/400 (12%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGF---------IRDSR--- 52
NV +TA++ G+V G EA L+ +M ++++ ++ +R+ R
Sbjct: 111 NVYLYTALIDGFVSSGNYLEAIQLYSRMLHESILPDNYLMASILKACGSQLALREGREVH 170
Query: 53 ---------------------------IDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVD 85
+ DARR+F+ MPE DVVA T M+ Y G V+
Sbjct: 171 SRALKLGFSSNRLVRLRIMELYGKCGELGDARRVFEEMPE-DVVASTVMISSYSDQGLVE 229
Query: 86 EGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMP----EKNEVSWTAMLMGYT 141
E +F + +K+ + WT MI G+V N + A + F M NE + +L +
Sbjct: 230 EAGAVFSRVRRKDTVCWTAMIDGFVRNEETNRALEAFRGMQGENVRPNEFTIVCVLSACS 289
Query: 142 QCGRIQDAWELFKAMPMKSV----VASNSMILGLGQNGEVQKARVVFDQMREKDDATWSG 197
Q G ++ + M + N++I + G + +A+ VFD+M+++D T++
Sbjct: 290 QLGALEIGRWVHSYMRKFEIELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNT 349
Query: 198 MIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVR-C 256
MI G + I+LF +M +R + + VL+ C+ +D G ++ + R
Sbjct: 350 MISGLSMNGKSRQAIELFRVMVGRRLRPTNVTFVGVLNACSHGGLVDFGFEIFHSMARDY 409
Query: 257 QFDVDVYVASVLITMYIKCGELVKG-KLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKV 315
+ + + ++ + + G L + LI + D +M +++S + E +V
Sbjct: 410 RVEPQIEHYGCMVDLLGRVGRLEEAYDLIRTMKMTPDHIMLGTLLSACKMHKNLELGEQV 469
Query: 316 FHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMK 355
E+ G D T V + + +GK KE ++ MK
Sbjct: 470 AKELEDRG-QADSGTYVLLSHVYASSGKWKEAAQVRAKMK 508
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 136/295 (46%), Gaps = 24/295 (8%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MPE +VV+ T M+ Y ++G++ EAG +F ++ K+ V WT M+ GF+R+ + A F
Sbjct: 208 MPE-DVVASTVMISSYSDQGLVEEAGAVFSRVRRKDTVCWTAMIDGFVRNEETNRALEAF 266
Query: 61 DMMPEKDVVAQTNM---VLGYC-QDGRVDEGREIFDEMPK----KNVISWTTMISGYVNN 112
M ++V VL C Q G ++ GR + M K N+ +I+ Y
Sbjct: 267 RGMQGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFEIELNLFVGNALINMYSRC 326
Query: 113 NRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGL- 171
ID A+ +F+ M +++ +++ M+ G + G+ + A ELF+ M + + +N +G+
Sbjct: 327 GSIDEAQTVFDEMKDRDVITYNTMISGLSMNGKSRQAIELFRVMVGRRLRPTNVTFVGVL 386
Query: 172 ---GQNGEVQKARVVFDQMR-----EKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGV 223
G V +F M E + M+ + R G E DL M+
Sbjct: 387 NACSHGGLVDFGFEIFHSMARDYRVEPQIEHYGCMVDLLGRVGRLEEAYDLIRTMKMTPD 446
Query: 224 RVNFPSLISVLSVCASLASLDHGRQVHAQLV-RCQFDVDVYVASVLITMYIKCGE 277
+ +L LS C +L+ G QV +L R Q D YV +L +Y G+
Sbjct: 447 HIMLGTL---LSACKMHKNLELGEQVAKELEDRGQADSGTYV--LLSHVYASSGK 496
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 72/148 (48%), Gaps = 11/148 (7%)
Query: 249 VHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGL 308
+HAQL+R D ++ L+ KC + IF + ++ ++ ++I G+ G
Sbjct: 68 IHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASRIFQYTHNPNVYLYTALIDGFVSSGN 127
Query: 309 GEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFE-----SMKSKYLVEPK 363
++++++ M ++PD+ + +L AC ++EGRE+ S LV +
Sbjct: 128 YLEAIQLYSRMLHESILPDNYLMASILKACGSQLALREGREVHSRALKLGFSSNRLVRLR 187
Query: 364 TEHYACMVDLLGRAGQVEDAMKLIEAMP 391
+++L G+ G++ DA ++ E MP
Sbjct: 188 ------IMELYGKCGELGDARRVFEEMP 209
>gi|225427576|ref|XP_002268530.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Vitis vinifera]
Length = 631
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 220/578 (38%), Positives = 338/578 (58%), Gaps = 26/578 (4%)
Query: 48 IRDSR-IDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKK-----NVIS 101
+ D R +D AR++F M + + ++ + + +F EM + N +
Sbjct: 55 VSDHRDLDYARKIFRSMHRPNCFSYNTLIRALSESNDPCDALLVFIEMVEDCSVEPNCFT 114
Query: 102 WTTMISGYVNNNRIDVARKLFEVMP----EKNEVSWTAMLMGYTQCGRIQDAWELF---- 153
+ ++ R+ R++ + + +E + ++ Y CG ++DA LF
Sbjct: 115 FPSVFKACGRAERLREGRQVHGLAVKFGLDSDEFVVSNVVRMYLSCGVMEDAHRLFYRRV 174
Query: 154 -----------KAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVY 202
K VV N MI G + GE++ AR +FD+M ++ +W+ MI Y
Sbjct: 175 FVDGCDGIRDKKRRVDGDVVLWNVMIDGYVRIGELEVARNLFDEMPQRSVVSWNVMIAGY 234
Query: 203 ERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDV 262
+ G+ E +++F MQ V N+ +L+SVL + L +L+ G+ VH VR VD
Sbjct: 235 AQSGHFKEAVEVFREMQMAEVPPNYVTLVSVLPAMSRLGALELGKWVHLYAVRNNIGVDD 294
Query: 263 YVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSS 322
+ S LI MY KCG + K +F+ +++V W++II+G A +G + +L F +M +
Sbjct: 295 VLGSALIDMYAKCGSIEKALQVFEGLPKRNVVTWSTIIAGLAMHGRAKDTLDHFEDMERA 354
Query: 323 GVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVED 382
GVMP DVT +G+LSACS+ G V EGR F+ M +EP+ EHY CMVDLLGRAG +E+
Sbjct: 355 GVMPSDVTYIGLLSACSHAGLVNEGRWFFDHMVRVSGLEPRIEHYGCMVDLLGRAGLLEE 414
Query: 383 AMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYAS 442
+ +LI MP +PD +IW +LLGAC+ H +++ + A+ L++L P ++G Y+ LSNIYAS
Sbjct: 415 SEELILNMPIKPDDVIWKALLGACKMHGNVEMGKRVAEHLMELAPHDSGSYVALSNIYAS 474
Query: 443 QGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGG 502
G + VA++R M++ +V K PGCSWIE++ +H F D SHP+ I ML+++
Sbjct: 475 LGNWEGVAKVRLMMKEMDVRKDPGCSWIELDGVIHEFLVED-DSHPKSKKIHSMLQEMSR 533
Query: 503 LLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGD 562
L GY P+++ VL ++DEE+K SL YHSEK+A+A+GL+ P+R+ KNLR+C D
Sbjct: 534 NLILVGYRPNTTQVLTNMDEEDKESSLNYHSEKIAIAFGLISTQPQTPLRITKNLRICED 593
Query: 563 CHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
CHS+IKLISK+ R+II+RD RFHHF +G CSC DYW
Sbjct: 594 CHSSIKLISKIYKRKIIVRDRKRFHHFVNGSCSCMDYW 631
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 149/331 (45%), Gaps = 56/331 (16%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMP---------------EKNVVSWTVMLGGFIRDSRID 54
+ +VR Y+ G++ +A LF++ + +VV W VM+ G++R ++
Sbjct: 151 SNVVRMYLSCGVMEDAHRLFYRRVFVDGCDGIRDKKRRVDGDVVLWNVMIDGYVRIGELE 210
Query: 55 DARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNV-ISWTTMISGYVNNN 113
AR LFD MP++ VV+ M+ GY Q G E E+F EM V ++ T++S +
Sbjct: 211 VARNLFDEMPQRSVVSWNVMIAGYAQSGHFKEAVEVFREMQMAEVPPNYVTLVSVLPAMS 270
Query: 114 RIDVAR--KLFEVMPEKN-----EVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNS 166
R+ K + +N +V +A++ Y +CG I+ A ++F+ +P ++VV ++
Sbjct: 271 RLGALELGKWVHLYAVRNNIGVDDVLGSALIDMYAKCGSIEKALQVFEGLPKRNVVTWST 330
Query: 167 MILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVN 226
+I GL +G R KD +D F M++ GV +
Sbjct: 331 IIAGLAMHG------------RAKD-------------------TLDHFEDMERAGVMPS 359
Query: 227 FPSLISVLSVCASLASLDHGRQVHAQLVRCQ-FDVDVYVASVLITMYIKCGELVKGKLIF 285
+ I +LS C+ ++ GR +VR + + ++ + + G L + + +
Sbjct: 360 DVTYIGLLSACSHAGLVNEGRWFFDHMVRVSGLEPRIEHYGCMVDLLGRAGLLEESEELI 419
Query: 286 DNFASK-DIVMWNSIISGYAQYGLGEKSLKV 315
N K D V+W +++ +G E +V
Sbjct: 420 LNMPIKPDDVIWKALLGACKMHGNVEMGKRV 450
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 97/195 (49%), Gaps = 12/195 (6%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMP 64
+VV W M+ GYV G + A LF +MP+++VVSW VM+ G+ + +A +F M
Sbjct: 192 DVVLWNVMIDGYVRIGELEVARNLFDEMPQRSVVSWNVMIAGYAQSGHFKEAVEVFREMQ 251
Query: 65 EKDV----VAQTNMVLGYCQDGRVDEGREIFDEMPKKNV----ISWTTMISGYVNNNRID 116
+V V +++ + G ++ G+ + + N+ + + +I Y I+
Sbjct: 252 MAEVPPNYVTLVSVLPAMSRLGALELGKWVHLYAVRNNIGVDDVLGSALIDMYAKCGSIE 311
Query: 117 VARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGL----G 172
A ++FE +P++N V+W+ ++ G GR +D + F+ M V+ S+ +GL
Sbjct: 312 KALQVFEGLPKRNVVTWSTIIAGLAMHGRAKDTLDHFEDMERAGVMPSDVTYIGLLSACS 371
Query: 173 QNGEVQKARVVFDQM 187
G V + R FD M
Sbjct: 372 HAGLVNEGRWFFDHM 386
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 105/226 (46%), Gaps = 22/226 (9%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLF--WQMPE--KNVVSWTVMLGGFIRDSRIDDA 56
MP+R+VVSW M+ GY + G EA +F QM E N V+ +L R ++
Sbjct: 219 MPQRSVVSWNVMIAGYAQSGHFKEAVEVFREMQMAEVPPNYVTLVSVLPAMSRLGALELG 278
Query: 57 RRLFDMMPEKDV----VAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+ + ++ V + ++ Y + G +++ ++F+ +PK+NV++W+T+I+G +
Sbjct: 279 KWVHLYAVRNNIGVDDVLGSALIDMYAKCGSIEKALQVFEGLPKRNVVTWSTIIAGLAMH 338
Query: 113 NRIDVARKLFE------VMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKS-----V 161
R FE VMP ++V++ +L + G + + F M S +
Sbjct: 339 GRAKDTLDHFEDMERAGVMP--SDVTYIGLLSACSHAGLVNEGRWFFDHMVRVSGLEPRI 396
Query: 162 VASNSMILGLGQNGEVQKARVVFDQMREK-DDATWSGMIKVYERKG 206
M+ LG+ G ++++ + M K DD W ++ + G
Sbjct: 397 EHYGCMVDLLGRAGLLEESEELILNMPIKPDDVIWKALLGACKMHG 442
>gi|347954524|gb|AEP33762.1| organelle transcript processing 82, partial [Hesperis matronalis]
Length = 672
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 234/642 (36%), Positives = 363/642 (56%), Gaps = 62/642 (9%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPE----KNVVSWTVMLGGFIRDSRIDDA 56
+PE N + W M RG+ A L+ M N ++ +L + +
Sbjct: 35 IPEPNQLIWNIMFRGHALSSDPVSALKLYVVMISLGLLPNFFTFPFLLKSCAKSKTFKEG 94
Query: 57 RRL--------FDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISG 108
+++ FD+ D+ T+++ Y Q+GR+++ +++FD ++V+S+T +I+G
Sbjct: 95 QQIHGHVLKLGFDL----DLYVHTSLISMYAQNGRLEDAQKVFDRSSHRDVVSYTALITG 150
Query: 109 YVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAM----------PM 158
Y + I+ A+K+F+ +P K+ VSW AM+ GY + G + A ELFK M M
Sbjct: 151 YASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMMKTNVKPDESTM 210
Query: 159 KSVVA----SNSMILG-----------LGQN--------------GEVQKARVVFDQMRE 189
+VV+ S S+ LG G N GEV+ A + + +
Sbjct: 211 ATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKCGEVETACELLEGLSN 270
Query: 190 KDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQV 249
KD +W+ +I Y E + LF M + G N +++S+L CA L ++D GR +
Sbjct: 271 KDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWI 330
Query: 250 HAQLVRCQFDVDVYVASVL----ITMYIKCGELVKGKLIFDNFA-SKDIVMWNSIISGYA 304
H + + V V AS L I MY KCG++ + D+ A ++ + WN++I G+A
Sbjct: 331 HVYIDKKLKGVVVTNASSLRTSLIDMYAKCGDIDAAPQVSDSSAFNRSLSTWNAMIFGFA 390
Query: 305 QYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKT 364
+G + +F M +G+ PDD+T VG+LSACS++G + GR IF SM+ Y + PK
Sbjct: 391 MHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRNIFRSMRQDYNITPKL 450
Query: 365 EHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQ 424
EHY CM+DLLG +G ++A ++I MP EPD +IW SLL AC+ H L+L E AKKL++
Sbjct: 451 EHYGCMIDLLGHSGLFKEAEEMINTMPMEPDGVIWCSLLKACKIHGNLELGESFAKKLIK 510
Query: 425 LEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKP-PGCSWIEVEKKVHMFTGRD 483
+EP+N G Y+LLSNIYA+ G++++V ++R + + + K PGCS IE++ VH F D
Sbjct: 511 IEPENPGSYVLLSNIYATAGKWNEVXKIRTLLNDKGMKKKVPGCSSIEIDSVVHEFIIGD 570
Query: 484 CVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLV 543
+ HP++ I MLE++ LL EAG+ PD+S VL +++EE K +LR+HSEKLA+A+GL+
Sbjct: 571 KL-HPQNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLI 629
Query: 544 KLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANR 585
G + ++KNLRVC +CH A KLISK+ REII RD R
Sbjct: 630 STKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTR 671
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 133/261 (50%), Gaps = 34/261 (13%)
Query: 183 VFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLAS 242
VF+ + E + W+ M + + + + L+ +M G+ NF + +L CA +
Sbjct: 31 VFETIPEPNQLIWNIMFRGHALSSDPVSALKLYVVMISLGLLPNFFTFPFLLKSCAKSKT 90
Query: 243 LDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFD---------------N 287
G+Q+H +++ FD+D+YV + LI+MY + G L + +FD
Sbjct: 91 FKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRSSHRDVVSYTALITG 150
Query: 288 FAS----------------KDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTL 331
+AS KD+V WN++ISGYA+ G +K+L++F EM + V PD+ T+
Sbjct: 151 YASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMMKTNVKPDESTM 210
Query: 332 VGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMP 391
V+SAC+ +G ++ GR++ S + + + ++DL + G+VE A +L+E +
Sbjct: 211 ATVVSACAQSGSIELGRQV-HSWINDHGFGSNLKIVNALIDLYSKCGEVETACELLEGLS 269
Query: 392 FEPDAIIWGSLLGACRTHMKL 412
D I W +L+G THM L
Sbjct: 270 -NKDVISWNTLIGG-YTHMNL 288
>gi|334185563|ref|NP_188975.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274454|sp|Q9LW63.1|PP251_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g23330
gi|11994318|dbj|BAB02277.1| unnamed protein product [Arabidopsis thaliana]
gi|332643232|gb|AEE76753.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 715
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 225/647 (34%), Positives = 340/647 (52%), Gaps = 53/647 (8%)
Query: 6 VVSWTAMVRGYVEEGMITEAGTLFWQM------PEKNVVSWTVMLGGFIRDSRIDDARRL 59
V++W +++R + ++ + ++A F +M P+ NV + + D R ++
Sbjct: 70 VLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHG 129
Query: 60 FDMMPEKDVVAQT-----NMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGY--VNN 112
F + D T NM G +FDEMP++ S + +
Sbjct: 130 FIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMP 189
Query: 113 NRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAM---------------- 156
ID R++FEVMP K+ VS+ ++ GY Q G +DA + + M
Sbjct: 190 FGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVL 249
Query: 157 PMKS-----------------------VVASNSMILGLGQNGEVQKARVVFDQMREKDDA 193
P+ S V +S++ ++ ++ + VF ++ +D
Sbjct: 250 PIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGI 309
Query: 194 TWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQL 253
+W+ ++ Y + G E + LF M V+ + SV+ CA LA+L G+Q+H +
Sbjct: 310 SWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYV 369
Query: 254 VRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSL 313
+R F ++++AS L+ MY KCG + + IFD D V W +II G+A +G G +++
Sbjct: 370 LRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAV 429
Query: 314 KVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDL 373
+F EM GV P+ V V VL+ACS+ G V E F SM Y + + EHYA + DL
Sbjct: 430 SLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADL 489
Query: 374 LGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPY 433
LGRAG++E+A I M EP +W +LL +C H L+LAE A+K+ ++ +N G Y
Sbjct: 490 LGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAY 549
Query: 434 ILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMI 493
+L+ N+YAS GR+ ++A+LR MRK+ + K P CSWIE++ K H F D SHP I
Sbjct: 550 VLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGD-RSHPSMDKI 608
Query: 494 MRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRV 553
L+ + + + GY D+S VLHDVDEE K L HSE+LAVA+G++ G IRV
Sbjct: 609 NEFLKAVMEQMEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINTEPGTTIRV 668
Query: 554 MKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
KN+R+C DCH AIK ISK+ REII+RD +RFHHF G CSC DYW
Sbjct: 669 TKNIRICTDCHVAIKFISKITEREIIVRDNSRFHHFNRGNCSCGDYW 715
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/260 (21%), Positives = 130/260 (50%), Gaps = 16/260 (6%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV----VSWTVMLGGFIRDSRIDDA 56
MP ++VVS+ ++ GY + GM +A + +M ++ + + +L F +
Sbjct: 202 MPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKG 261
Query: 57 RRLFDMMPEK----DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+ + + K DV +++V Y + R+++ +F + ++ ISW ++++GYV N
Sbjct: 262 KEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQN 321
Query: 113 NRIDVARKLFEVM----PEKNEVSWTAMLMGYTQCGRIQDAWEL----FKAMPMKSVVAS 164
R + A +LF M + V++++++ + +L + ++ +
Sbjct: 322 GRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIA 381
Query: 165 NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVR 224
++++ + G ++ AR +FD+M D+ +W+ +I + G+ E + LF M+++GV+
Sbjct: 382 SALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVK 441
Query: 225 VNFPSLISVLSVCASLASLD 244
N + ++VL+ C+ + +D
Sbjct: 442 PNQVAFVAVLTACSHVGLVD 461
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 110/258 (42%), Gaps = 38/258 (14%)
Query: 184 FDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASL 243
F ++ W +I+ + + + + F M+ G + SVL C + L
Sbjct: 62 FKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDL 121
Query: 244 DHGRQVHAQLVRCQFDVDVYVASVLITMYIKC------------------------GELV 279
G VH +VR D D+Y + L+ MY K E V
Sbjct: 122 RFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDV 181
Query: 280 KG------------KLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPD 327
K + +F+ KD+V +N+II+GYAQ G+ E +L++ EM ++ + PD
Sbjct: 182 KAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPD 241
Query: 328 DVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLI 387
TL VL S V +G+EI + K ++ + +VD+ ++ ++ED+ ++
Sbjct: 242 SFTLSSVLPIFSEYVDVIKGKEIHGYVIRKG-IDSDVYIGSSLVDMYAKSARIEDSERVF 300
Query: 388 EAMPFEPDAIIWGSLLGA 405
+ + D I W SL+
Sbjct: 301 SRL-YCRDGISWNSLVAG 317
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 54/111 (48%), Gaps = 1/111 (0%)
Query: 240 LASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSI 299
+ S +Q+HAQ +R Q + AS++I++Y L + L+F S ++ W S+
Sbjct: 18 IKSKSQAKQLHAQFIRTQ-SLSHTSASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSV 76
Query: 300 ISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREI 350
I + L K+L F EM +SG PD VL +C+ ++ G +
Sbjct: 77 IRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESV 127
>gi|302754942|ref|XP_002960895.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
gi|300171834|gb|EFJ38434.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
Length = 903
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 229/651 (35%), Positives = 349/651 (53%), Gaps = 57/651 (8%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDM 62
E+ +V TA+ Y G + +A +F + E++VVSW MLG + + + +A LF
Sbjct: 257 EQTLVVSTALASAYARLGHLYQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFAR 316
Query: 63 M------PEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRID 116
M P K + + + GR+ G + ++ ++++ ++ Y +
Sbjct: 317 MLHEGISPSKVTLVNASTGCSSLRFGRMIHGCAL-EKGLDRDIVLGNALLDMYTRCGSPE 375
Query: 117 VARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSV-------------VA 163
AR LF+ +P N VSW M+ G +Q G+++ A ELF+ M ++ + VA
Sbjct: 376 EARHLFKRIP-CNAVSWNTMIAGSSQKGQMKRAVELFQRMQLEGMAPVRATYLNLLEAVA 434
Query: 164 SN--------------SMILGLG----------------QNGEVQKARVVFDQ--MREKD 191
SN S I+ G G + +A F + M ++
Sbjct: 435 SNPEEARAMAEGRKLHSRIVSCGYASEPAIGTAVVKMYASCGAIDEAAASFQRGAMEDRH 494
Query: 192 DA-TWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVH 250
D +W+ +I + G+ + F M GV N + ++VL CA A+L G VH
Sbjct: 495 DVVSWNAIISSLSQHGHGKRALGFFRRMDLHGVAPNQITCVAVLDACAGAAALTEGEIVH 554
Query: 251 AQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFA-SKDIVMWNSIISGYAQYGLG 309
L + +++VA+ L +MY +CG L + IF+ A +D+V++N++I+ Y+Q GL
Sbjct: 555 DHLRHSGMESNLFVATALASMYGRCGSLESAREIFEKVAVERDVVIFNAMIAAYSQNGLA 614
Query: 310 EKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYAC 369
++LK+F M G PD+ + V VLSACS+ G EG EIF SM+ Y + P +HYAC
Sbjct: 615 GEALKLFWRMQQEGSRPDEQSFVSVLSACSHGGLADEGWEIFRSMRQSYGIAPSEDHYAC 674
Query: 370 MVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKN 429
VD+LGRAG + DA +LI M +P ++W +LLGACR + +D +A + +L+P +
Sbjct: 675 AVDVLGRAGWLADAEELIRCMDVKPTVLVWKTLLGACRKYRDVDRGRLANSMVRELDPGD 734
Query: 430 AGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPE 489
Y++LSNI A G++ + AE+R M R + K G SWIE++ +VH F D SHP
Sbjct: 735 ESAYVVLSNILAGAGKWDEAAEVRTEMESRGLRKEAGKSWIEIKSRVHEFVAGD-RSHPR 793
Query: 490 HPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGV 549
I R LE++ +RE GY PD+ VL VDE EK L HSE+LA+A G++
Sbjct: 794 SEEIYRELERLHAEIREIGYVPDTRLVLRKVDEAEKERLLCQHSERLAIALGVMSSSTDT 853
Query: 550 PIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
+RVMKNLRVC DCH+A K ISK++ +EI++RD +RFHHF DG CSC DYW
Sbjct: 854 -VRVMKNLRVCEDCHNATKFISKIVNKEIVVRDTHRFHHFVDGSCSCGDYW 903
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 118/485 (24%), Positives = 232/485 (47%), Gaps = 28/485 (5%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLG-GFIRDSRIDDARRLFD 61
ER++VSW A + + G + A LF +M + V + L + I A+ +
Sbjct: 190 ERDLVSWNAAIAANAQSGDLGIALELFQRMQLEGVRPARITLVIALTVCATIRQAQAIHF 249
Query: 62 MMPE----KDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDV 117
++ E + +V T + Y + G + + +E+FD +++V+SW M+ Y + +
Sbjct: 250 IVRESGLEQTLVVSTALASAYARLGHLYQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSE 309
Query: 118 ARKLF-EVMPEKNEVSWTAMLMGYTQC-----GRIQDAWELFKAMPMKSVVASNSMILGL 171
A LF ++ E S ++ T C GR+ L K + + +V N+++
Sbjct: 310 AALLFARMLHEGISPSKVTLVNASTGCSSLRFGRMIHGCALEKGLD-RDIVLGNALLDMY 368
Query: 172 GQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEG---VRVNFP 228
+ G ++AR +F ++ + +W+ MI +KG ++LF MQ EG VR +
Sbjct: 369 TRCGSPEEARHLFKRI-PCNAVSWNTMIAGSSQKGQMKRAVELFQRMQLEGMAPVRATYL 427
Query: 229 SLI-SVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDN 287
+L+ +V S ++ GR++H+++V C + + + + ++ MY CG + + F
Sbjct: 428 NLLEAVASNPEEARAMAEGRKLHSRIVSCGYASEPAIGTAVVKMYASCGAIDEAAASFQR 487
Query: 288 FA---SKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKV 344
A D+V WN+IIS +Q+G G+++L F M GV P+ +T V VL AC+ +
Sbjct: 488 GAMEDRHDVVSWNAIISSLSQHGHGKRALGFFRRMDLHGVAPNQITCVAVLDACAGAAAL 547
Query: 345 KEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLG 404
EG + + ++ + E + + GR G +E A ++ E + E D +I+ +++
Sbjct: 548 TEGEIVHDHLRHSGM-ESNLFVATALASMYGRCGSLESAREIFEKVAVERDVVIFNAMIA 606
Query: 405 ACRTHMKLDLAEVAAKKLLQLEPKNAGP----YILLSNIYASQGRFHDVAELRKNMRKRN 460
A + + LA A K +++ + + P ++ + + + G + E+ ++MR+
Sbjct: 607 A---YSQNGLAGEALKLFWRMQQEGSRPDEQSFVSVLSACSHGGLADEGWEIFRSMRQSY 663
Query: 461 VIKPP 465
I P
Sbjct: 664 GIAPS 668
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 98/426 (23%), Positives = 202/426 (47%), Gaps = 27/426 (6%)
Query: 4 RNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV----VSWTVMLGGFIRDSRIDDARRL 59
R+ SWT ++ Y E G A +F +M ++ V V++ +L R + R +
Sbjct: 91 RDEASWTTIITAYTEHGQAKRAIGMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSI 150
Query: 60 FDMMPEKDVVAQT---NMVLG-YCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRI 115
+ E + ++ N++L Y G V +F++M +++++SW I+ + +
Sbjct: 151 HAWIVESGLKGKSVLANLLLHIYGSCGCVASAMLLFEKM-ERDLVSWNAAIAANAQSGDL 209
Query: 116 DVARKLFEVMP-EKNEVSWTAMLMGYTQCGRIQDAWELF----KAMPMKSVVASNSMILG 170
+A +LF+ M E + +++ T C I+ A + ++ +++V S ++
Sbjct: 210 GIALELFQRMQLEGVRPARITLVIALTVCATIRQAQAIHFIVRESGLEQTLVVSTALASA 269
Query: 171 LGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSL 230
+ G + +A+ VFD+ E+D +W+ M+ Y + G+ E LF M EG+ PS
Sbjct: 270 YARLGHLYQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGIS---PSK 326
Query: 231 ISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFAS 290
+++++ +SL GR +H + D D+ + + L+ MY +CG + + +F
Sbjct: 327 VTLVNASTGCSSLRFGRMIHGCALEKGLDRDIVLGNALLDMYTRCGSPEEARHLFKRIPC 386
Query: 291 KDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGK----VKE 346
+ V WN++I+G +Q G ++++++F M G+ P T + +L A + + + E
Sbjct: 387 -NAVSWNTMIAGSSQKGQMKRAVELFQRMQLEGMAPVRATYLNLLEAVASNPEEARAMAE 445
Query: 347 GREIFESMKS-KYLVEPKTEHYACMVDLLGRAGQVEDAMKLIE--AMPFEPDAIIWGSLL 403
GR++ + S Y EP +V + G +++A + AM D + W +++
Sbjct: 446 GRKLHSRIVSCGYASEPAIG--TAVVKMYASCGAIDEAAASFQRGAMEDRHDVVSWNAII 503
Query: 404 GACRTH 409
+ H
Sbjct: 504 SSLSQH 509
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 104/378 (27%), Positives = 183/378 (48%), Gaps = 24/378 (6%)
Query: 89 EIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEK----NEVSWTAML-----MG 139
E+F + ++ SWTT+I+ Y + + A +F M ++ + V++ A+L +G
Sbjct: 83 EVFSRLEVRDEASWTTIITAYTEHGQAKRAIGMFHRMQQEGVRCDAVTFLAVLKACARLG 142
Query: 140 YTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMI 199
GR AW + + KSV+A N ++ G G V A ++F++M E+D +W+ I
Sbjct: 143 DLSQGRSIHAWIVESGLKGKSVLA-NLLLHIYGSCGCVASAMLLFEKM-ERDLVSWNAAI 200
Query: 200 KVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFD 259
+ G ++LF MQ EGVR +L+ L+VCA++ + +H + +
Sbjct: 201 AANAQSGDLGIALELFQRMQLEGVRPARITLVIALTVCATI---RQAQAIHFIVRESGLE 257
Query: 260 VDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEM 319
+ V++ L + Y + G L + K +FD A +D+V WN+++ YAQ+G ++ +F M
Sbjct: 258 QTLVVSTALASAYARLGHLYQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARM 317
Query: 320 FSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQ 379
G+ P VTLV + CS ++ GR I K L A ++D+ R G
Sbjct: 318 LHEGISPSKVTLVNASTGCS---SLRFGRMIHGCALEKGLDRDIVLGNA-LLDMYTRCGS 373
Query: 380 VEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLE---PKNAGPYILL 436
E+A L + +P +A+ W +++ ++ A V + +QLE P A LL
Sbjct: 374 PEEARHLFKRIPC--NAVSWNTMIAGSSQKGQMKRA-VELFQRMQLEGMAPVRATYLNLL 430
Query: 437 SNIYASQGRFHDVAELRK 454
+ ++ +AE RK
Sbjct: 431 EAVASNPEEARAMAEGRK 448
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 86/167 (51%), Gaps = 13/167 (7%)
Query: 243 LDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISG 302
L GR++HA++V ++ + + L+ +Y+KC L + +F +D W +II+
Sbjct: 45 LSQGRRIHARIV--SLGLEEELGNHLLRLYLKCESLGDVEEVFSRLEVRDEASWTTIITA 102
Query: 303 YAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEP 362
Y ++G ++++ +FH M GV D VT + VL AC+ G + +GR I ++VE
Sbjct: 103 YTEHGQAKRAIGMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSIH-----AWIVES 157
Query: 363 KTEHYACMVDLL----GRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
+ + + +LL G G V AM L E M E D + W + + A
Sbjct: 158 GLKGKSVLANLLLHIYGSCGCVASAMLLFEKM--ERDLVSWNAAIAA 202
>gi|449434342|ref|XP_004134955.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Cucumis sativus]
Length = 599
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 207/549 (37%), Positives = 319/549 (58%), Gaps = 32/549 (5%)
Query: 72 TNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMIS-----GYVNNNRIDVARKLFEVMP 126
T ++ C G + R +F +P + + +++ G+ + + R LF P
Sbjct: 63 TKLISLVCTAGSITYARRLFPTVPNPDSFLFDSLLKVTSKFGFSIDTVLFYRRMLFSGAP 122
Query: 127 EKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARV---- 182
+ N YT I+ +L A+ + + S+ M+ G G + VQ A +
Sbjct: 123 QSN----------YTFTSVIKACADL-SALRLGKEIHSHVMVCGYGSDMYVQAALIALYA 171
Query: 183 ----------VFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLIS 232
VFD M ++ W+ +I Y++ G E I LF LM + G + + +++S
Sbjct: 172 KASDMKVAKKVFDAMPQRTIIAWNSLISGYDQNGLPQESIGLFHLMMESGFQPDSATIVS 231
Query: 233 VLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKD 292
+LS C+ L +LD G +H FD++V + + LI MY +CG + K + +FD+ ++
Sbjct: 232 LLSSCSQLGALDFGCWLHDYADGNGFDLNVVLGTSLINMYTRCGNVSKAREVFDSMKERN 291
Query: 293 IVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFE 352
+V W ++ISGY +G G +++++F EM + G P+++T V VLSAC+++G + +GR +F
Sbjct: 292 VVTWTAMISGYGMHGYGRQAMELFTEMRAYGPRPNNITFVAVLSACAHSGLIDDGRRVFS 351
Query: 353 SMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEA-MPFEPDAIIWGSLLGACRTHMK 411
SMK Y + P EH CMVD+ GRAG + DA + I+ +P EP +W S+LGACR H
Sbjct: 352 SMKEAYGLVPGVEHNVCMVDMFGRAGLLNDAYQFIKKFIPKEPGPAVWTSMLGACRMHRN 411
Query: 412 LDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIE 471
DL A+ +L +EP+N G Y++LSNIYA GR V +R M +R + K G S IE
Sbjct: 412 FDLGVKVAEHVLSVEPENPGHYVMLSNIYALAGRMDRVEMVRNMMTRRRLKKQVGYSTIE 471
Query: 472 VEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRY 531
+ +K ++F+ D SHP+ I R L+++ E+GY P ++HD++EEE+ ++LRY
Sbjct: 472 INRKTYLFSMGD-KSHPQTNTIYRYLDELMCRCSESGYVPAPESLMHDLEEEERDYALRY 530
Query: 532 HSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKD 591
HSEKLA+A+GL+K +G IR++KNLR+C DCHSAIK IS + REII+RD RFHHFKD
Sbjct: 531 HSEKLALAFGLLKTNQGETIRIVKNLRICEDCHSAIKHISIIADREIIVRDKFRFHHFKD 590
Query: 592 GLCSCRDYW 600
G CSC DYW
Sbjct: 591 GSCSCLDYW 599
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 99/195 (50%), Gaps = 8/195 (4%)
Query: 67 DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMP 126
D+ Q ++ Y + + +++FD MP++ +I+W ++ISGY N + LF +M
Sbjct: 159 DMYVQAALIALYAKASDMKVAKKVFDAMPQRTIIAWNSLISGYDQNGLPQESIGLFHLMM 218
Query: 127 EK----NEVSWTAMLMGYTQCGRIQDAWELFKAMPMK----SVVASNSMILGLGQNGEVQ 178
E + + ++L +Q G + L +VV S+I + G V
Sbjct: 219 ESGFQPDSATIVSLLSSCSQLGALDFGCWLHDYADGNGFDLNVVLGTSLINMYTRCGNVS 278
Query: 179 KARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCA 238
KAR VFD M+E++ TW+ MI Y GY + ++LFT M+ G R N + ++VLS CA
Sbjct: 279 KAREVFDSMKERNVVTWTAMISGYGMHGYGRQAMELFTEMRAYGPRPNNITFVAVLSACA 338
Query: 239 SLASLDHGRQVHAQL 253
+D GR+V + +
Sbjct: 339 HSGLIDDGRRVFSSM 353
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 103/222 (46%), Gaps = 27/222 (12%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEK----------NVVSWTVMLGGFIRD 50
MP+R +++W +++ GY + G+ E+ LF M E +++S LG
Sbjct: 186 MPQRTIIAWNSLISGYDQNGLPQESIGLFHLMMESGFQPDSATIVSLLSSCSQLGALDFG 245
Query: 51 SRIDDAR--RLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISG 108
+ D FD+ +VV T+++ Y + G V + RE+FD M ++NV++WT MISG
Sbjct: 246 CWLHDYADGNGFDL----NVVLGTSLINMYTRCGNVSKAREVFDSMKERNVVTWTAMISG 301
Query: 109 YVNNNRIDVARKLFEVM----PEKNEVSWTAMLMGYTQCGRIQDAWELFKAMP-----MK 159
Y + A +LF M P N +++ A+L G I D +F +M +
Sbjct: 302 YGMHGYGRQAMELFTEMRAYGPRPNNITFVAVLSACAHSGLIDDGRRVFSSMKEAYGLVP 361
Query: 160 SVVASNSMILGLGQNGEVQKARVVFDQM--REKDDATWSGMI 199
V + M+ G+ G + A + +E A W+ M+
Sbjct: 362 GVEHNVCMVDMFGRAGLLNDAYQFIKKFIPKEPGPAVWTSML 403
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 92/192 (47%), Gaps = 12/192 (6%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEK--- 66
A++ Y + + A +F MP++ +++W ++ G+ ++ ++ LF +M E
Sbjct: 164 AALIALYAKASDMKVAKKVFDAMPQRTIIAWNSLISGYDQNGLPQESIGLFHLMMESGFQ 223
Query: 67 -DVVAQTNMVLGYCQDGRVDEGREIFDEMPKK----NVISWTTMISGYVNNNRIDVARKL 121
D +++ Q G +D G + D NV+ T++I+ Y + AR++
Sbjct: 224 PDSATIVSLLSSCSQLGALDFGCWLHDYADGNGFDLNVVLGTSLINMYTRCGNVSKAREV 283
Query: 122 FEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAM----PMKSVVASNSMILGLGQNGEV 177
F+ M E+N V+WTAM+ GY G + A ELF M P + + +++ +G +
Sbjct: 284 FDSMKERNVVTWTAMISGYGMHGYGRQAMELFTEMRAYGPRPNNITFVAVLSACAHSGLI 343
Query: 178 QKARVVFDQMRE 189
R VF M+E
Sbjct: 344 DDGRRVFSSMKE 355
>gi|449497733|ref|XP_004160501.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g13650-like [Cucumis sativus]
Length = 1037
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 223/629 (35%), Positives = 355/629 (56%), Gaps = 54/629 (8%)
Query: 22 ITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNM---VLGY 78
+ A F +N+V W VML + + + D+ +F M + ++ +L
Sbjct: 413 VETAHKFFLXTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRT 472
Query: 79 CQD-GRVDEGREIFDEMPKK----NVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSW 133
C G + G +I + K NV + +I Y ++ +A ++ +PE + VSW
Sbjct: 473 CTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSW 532
Query: 134 TAMLMGYTQCGRIQDAWELFKAMPMKSV-------------------------VASNSMI 168
TAM+ GY Q +A +LF+ M + + + + S
Sbjct: 533 TAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYA 592
Query: 169 LGLGQN--------------GEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDL 214
G G + G +Q+A + F+++ +K++ +W+ ++ + GY E + +
Sbjct: 593 AGFGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQSGYFEEALQV 652
Query: 215 FTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIK 274
F M + VN + S +S ASLA++ G+Q+H+ +++ +D + V++ LI++Y K
Sbjct: 653 FVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQIHSMVLKTGYDSEREVSNSLISLYAK 712
Query: 275 CGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGV 334
G + F++ + ++++ WN++I+GY+Q+G G ++L++F EM G+MP+ VT VGV
Sbjct: 713 SGSISDAWREFNDMSERNVISWNAMITGYSQHGCGMEALRLFEEMKVCGIMPNHVTFVGV 772
Query: 335 LSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEP 394
LSACS+ G VKEG + FESM + + PK+EHY C+VDLLGRAGQ++ AM+ I+ MP
Sbjct: 773 LSACSHIGLVKEGLDYFESMFKIHDLVPKSEHYVCVVDLLGRAGQLDRAMEYIKEMPIPA 832
Query: 395 DAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRK 454
DA+IW +LL AC H +++ E AA LL+LEP+++ Y+L+SNIYA ++ RK
Sbjct: 833 DAMIWRTLLSACVIHKNIEIGERAAHHLLELEPEDSATYVLISNIYAVSRQWIHRDWSRK 892
Query: 455 NMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLR---EAGYCP 511
M+ V K PG SWIEV+ VH F D + HP+ ++ E IG L R E GY
Sbjct: 893 LMKDXGVKKEPGRSWIEVKNAVHAFYAGDKL----HPLTNQIYEYIGHLNRRTSEIGYVQ 948
Query: 512 DSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLIS 571
DS +L++ ++ +K HSEKLA+A+GL+ L +PIRVMKNLRVC DCH+ IK +S
Sbjct: 949 DSFSLLNESEQGQKDPITHVHSEKLAIAFGLLSLGNNIPIRVMKNLRVCNDCHNWIKYVS 1008
Query: 572 KVMGREIILRDANRFHHFKDGLCSCRDYW 600
K+ R II+RDA+RFHHF G+CSC+D+W
Sbjct: 1009 KISNRSIIVRDAHRFHHFDGGVCSCKDFW 1037
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 99/422 (23%), Positives = 194/422 (45%), Gaps = 26/422 (6%)
Query: 4 RNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMM 63
+++V+W AM+ G + G+ EA LF M + +L + S +LF++
Sbjct: 224 KDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSAS---TKIQLFELG 280
Query: 64 PE-----------KDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+ + +V Y + ++ IF M ++ +S+ ++ISG V
Sbjct: 281 EQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQ 340
Query: 113 NRIDVARKLFEVMP----EKNEVSWTAMLMGYTQCGRIQDAWEL----FKAMPMKSVVAS 164
D A +LF M + + ++ ++L G + +L KA ++
Sbjct: 341 GFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILE 400
Query: 165 NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVR 224
S++ + +V+ A F ++ W+ M+ Y + + ++F MQ EG+
Sbjct: 401 GSLLDLYSKCADVETAHKFFLXTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMI 460
Query: 225 VNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLI 284
N + S+L C SL +L G Q+H +++ F ++VYV SVLI MY K G+L I
Sbjct: 461 PNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRI 520
Query: 285 FDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKV 344
D+V W ++I+GY Q+ + ++L++F EM G+ D++ +SAC+ +
Sbjct: 521 LRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRAL 580
Query: 345 KEGREIF-ESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
++G++I +S + + + + ++ L R G++++A E + + + I W SL+
Sbjct: 581 RQGQQIHAQSYAAGFGADLSINN--ALISLYARCGRIQEAYLAFEKIG-DKNNISWNSLV 637
Query: 404 GA 405
Sbjct: 638 SG 639
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 101/451 (22%), Positives = 199/451 (44%), Gaps = 58/451 (12%)
Query: 11 AMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVA 70
++V Y G A +F + ++V SW M+ F+ LF M + +
Sbjct: 98 SLVDNYFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITP 157
Query: 71 QTNM---VLGYCQDGRVD-------EGREIFDEMPKKNVISWTTMISGYVNNNRIDVARK 120
VL C G + R + +++ +I Y N I+ A+K
Sbjct: 158 NGYTFAGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVA-NLLIDLYSKNGYIESAKK 216
Query: 121 LFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMP----------MKSVVASNSMI-- 168
+F + K+ V+W AM+ G +Q G ++A LF M + SV+++++ I
Sbjct: 217 VFNCICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQL 276
Query: 169 LGLGQ------------------NGEVQ---------KARVVFDQMREKDDATWSGMIKV 201
LG+ NG V A +F M +D +++ +I
Sbjct: 277 FELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISG 336
Query: 202 YERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVD 261
++G+ ++LFT MQ++ ++ + ++ S+LS CAS+ +L G Q+H+ ++ D
Sbjct: 337 LVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSAD 396
Query: 262 VYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFS 321
+ + L+ +Y KC ++ F +++IV+WN ++ Y Q S ++F +M
Sbjct: 397 IILEGSLLDLYSKCADVETAHKFFLXTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQM 456
Query: 322 SGVMPDDVTLVGVLSACSYTGKVKEGREIFES-MKSKYLVEPKTEHYAC--MVDLLGRAG 378
G++P+ T +L C+ G + G +I +K+ + + Y C ++D+ + G
Sbjct: 457 EGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNV----YVCSVLIDMYAKYG 512
Query: 379 QVEDAMKLIEAMPFEPDAIIWGSLLGACRTH 409
Q+ A++++ +P E D + W +++ H
Sbjct: 513 QLALALRILRRLP-EDDVVSWTAMIAGYVQH 542
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 125/283 (44%), Gaps = 44/283 (15%)
Query: 165 NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVR 224
+S++ ++G+ A VFD+ + +W+ MI V+ + +V LF M EG+
Sbjct: 97 DSLVDNYFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGIT 156
Query: 225 VNFPSLISVLSVC-ASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKL 283
N + VL C + ++ +QVH++ FD VA++LI +Y K G + K
Sbjct: 157 PNGYTFAGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKK 216
Query: 284 IFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSAC----- 338
+F+ KDIV W ++ISG +Q GL E+++ +F +M +S + P L VLSA
Sbjct: 217 VFNCICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQL 276
Query: 339 ------------------------------SYTGKVKEGREIFESMKSKYLVEPKTEHYA 368
S + K+ IF +M S+ V Y
Sbjct: 277 FELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVS-----YN 331
Query: 369 CMVDLLGRAGQVEDAMKLIEAMP---FEPDAIIWGSLLGACRT 408
++ L + G + A++L M +PD I SLL AC +
Sbjct: 332 SLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACAS 374
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 122/263 (46%), Gaps = 18/263 (6%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
+PE +VVSWTAM+ GYV+ M +EA LF +M + + + I A R
Sbjct: 524 LPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQG 583
Query: 61 DMMPEK--------DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+ + D+ ++ Y + GR+ E F+++ KN ISW +++SG +
Sbjct: 584 QQIHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQS 643
Query: 113 NRIDVARKLFEVM----PEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVV-----A 163
+ A ++F M E N ++ + + I+ ++ +M +K+
Sbjct: 644 GYFEEALQVFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQI-HSMVLKTGYDSEREV 702
Query: 164 SNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGV 223
SNS+I ++G + A F+ M E++ +W+ MI Y + G +E + LF M+ G+
Sbjct: 703 SNSLISLYAKSGSISDAWREFNDMSERNVISWNAMITGYSQHGCGMEALRLFEEMKVCGI 762
Query: 224 RVNFPSLISVLSVCASLASLDHG 246
N + + VLS C+ + + G
Sbjct: 763 MPNHVTFVGVLSACSHIGLVKEG 785
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 89/201 (44%), Gaps = 15/201 (7%)
Query: 212 IDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITM 271
I L M++ GVR N+ + + +L C + SL ++H ++ + FD + + L+
Sbjct: 43 IQLMNFMEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDN 102
Query: 272 YIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTL 331
Y + G+ +FD +++ + WN +I + + +F M + G+ P+ T
Sbjct: 103 YFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTF 162
Query: 332 VGVLSAC-------SYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAM 384
GVL AC +Y +V R + S LV ++DL + G +E A
Sbjct: 163 AGVLKACVGGDIAFNYVKQV-HSRTFYYGFDSSPLVAN------LLIDLYSKNGYIESAK 215
Query: 385 KLIEAMPFEPDAIIWGSLLGA 405
K+ + + D + W +++
Sbjct: 216 KVFNCICMK-DIVTWVAMISG 235
>gi|147819178|emb|CAN71462.1| hypothetical protein VITISV_018656 [Vitis vinifera]
Length = 787
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 220/614 (35%), Positives = 349/614 (56%), Gaps = 46/614 (7%)
Query: 4 RNVVSWTAMVRGYVEEGMITEAGTLFWQMP----EKNVVSWTVMLGGFIRDSRIDDARRL 59
+++VSWT MV + E EA LF QM + N ++ + + D + +
Sbjct: 203 KDMVSWTGMVTCFAENDCFKEALKLFSQMRMVGFKPNNFTFASVFKACLGLEAFDVGKSV 262
Query: 60 ----FDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRI 115
E D+ ++ Y + G +D+ R F+E+PKK+VI W+ MI+ Y +++
Sbjct: 263 HGCALKSRYELDLYVGVALLDLYTKSGDIDDARXAFEEIPKKDVIPWSFMIARYAQSDQS 322
Query: 116 DVARKLFEVMPEK----NEVSWTAMLMGYTQCGRI----QDAWELFKAMPMKSVVASNSM 167
A ++F M + N+ ++ ++L + Q + K V SN++
Sbjct: 323 KEAVEMFFQMRQALVLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNAL 382
Query: 168 ILGLGQNGEVQKARVVFDQMREKDDAT-WSGMIKVYERKGYELEVIDLFTLMQKEGVRVN 226
+ + G ++ + +F + ++D T W+ +I + + G + + LF M + V+
Sbjct: 383 MDVYAKCGRMENSMXLFAESPHRNDVTPWNTVIVGHVQLGDGEKALRLFLNMLEYRVQAT 442
Query: 227 FPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFD 286
+ S L CASLA+L+ G Q+H+ V+ FD D+ V + LI MY KCG + +L+FD
Sbjct: 443 EVTYSSALRACASLAALEPGLQIHSLTVKTTFDKDIVVTNALIDMYAKCGSIKDARLVFD 502
Query: 287 NFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKE 346
+D V WN++ISGY+ +GL AC+ G + +
Sbjct: 503 LMNKQDEVSWNAMISGYSMHGL----------------------------ACANAGLLDQ 534
Query: 347 GREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGAC 406
G+ F SM + +EP EHY CMV LLGR G ++ A+KLI+ +PF+P ++W +LLGAC
Sbjct: 535 GQAYFTSMIQDHGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDEIPFQPSVMVWRALLGAC 594
Query: 407 RTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPG 466
H ++L ++A+ +L++EP++ ++LLSN+YA+ R+ +VA +RKNM+++ V K PG
Sbjct: 595 VIHNDIELGRISAQHVLEMEPQDKATHVLLSNMYATAKRWDNVASVRKNMKRKGVKKEPG 654
Query: 467 CSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKV 526
SWIE + VH FT D SHPE +I MLE + ++AGY P+ + VL DV++EEK
Sbjct: 655 LSWIESQGTVHSFTVGD-TSHPEVRVINGMLEWLHMKTKKAGYIPNYNVVLLDVEDEEKE 713
Query: 527 HSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRF 586
L HSE+LA+++G+++ P G PIR+MKNLR+C DCH+AIK ISKV+ REI++RD NRF
Sbjct: 714 RLLWVHSERLALSFGIIRTPSGSPIRIMKNLRICVDCHAAIKCISKVVQREIVVRDINRF 773
Query: 587 HHFKDGLCSCRDYW 600
HHF++GLCSC DYW
Sbjct: 774 HHFQEGLCSCGDYW 787
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 110/457 (24%), Positives = 216/457 (47%), Gaps = 58/457 (12%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF---- 60
++ +W ++ YV+ + +A LF +MPE+N +S+ ++ G+ R +A LF
Sbjct: 72 DLFAWNILLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQGYAESVRFLEAIELFVRLH 131
Query: 61 ----DMMP-------------------------------EKDVVAQTNMVLGYCQDGRVD 85
++ P E + T ++ Y GRVD
Sbjct: 132 REGHELNPFVFTTILKLLVSMDCGELGWGIHACIFKLGHESNAFVGTALIDAYSVCGRVD 191
Query: 86 EGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMP----EKNEVSWTAMLMGYT 141
RE+FD + K+++SWT M++ + N+ A KLF M + N ++ ++ +
Sbjct: 192 VAREVFDGILYKDMVSWTGMVTCFAENDCFKEALKLFSQMRMVGFKPNNFTFASV---FK 248
Query: 142 QCGRIQDAWELFKAMPMKSVVASNSMILGLG--------QNGEVQKARVVFDQMREKDDA 193
C ++ A+++ K++ ++ + + L +G ++G++ AR F+++ +KD
Sbjct: 249 ACLGLE-AFDVGKSVHGCALKSRYELDLYVGVALLDLYTKSGDIDDARXAFEEIPKKDVI 307
Query: 194 TWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQL 253
WS MI Y + E +++F M++ V N + SVL CA++ L+ G Q+H +
Sbjct: 308 PWSFMIARYAQSDQSKEAVEMFFQMRQALVLPNQFTFASVLQACATMEGLNLGNQIHCHV 367
Query: 254 VRCQFDVDVYVASVLITMYIKCGELVKGKLIF-DNFASKDIVMWNSIISGYAQYGLGEKS 312
++ DV+V++ L+ +Y KCG + +F ++ D+ WN++I G+ Q G GEK+
Sbjct: 368 IKIGLHSDVFVSNALMDVYAKCGRMENSMXLFAESPHRNDVTPWNTVIVGHVQLGDGEKA 427
Query: 313 LKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVD 372
L++F M V +VT L AC+ ++ G +I S+ K + ++D
Sbjct: 428 LRLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQI-HSLTVKTTFDKDIVVTNALID 486
Query: 373 LLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTH 409
+ + G ++DA + + M + D + W +++ H
Sbjct: 487 MYAKCGSIKDARLVFDLMN-KQDEVSWNAMISGYSMH 522
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 95/369 (25%), Positives = 177/369 (47%), Gaps = 16/369 (4%)
Query: 67 DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMP 126
D+ A ++ Y + + + ++FDEMP++N IS+ T+I GY + R A +LF +
Sbjct: 72 DLFAWNILLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQGYAESVRFLEAIELFVRLH 131
Query: 127 ----EKNEVSWTAML--MGYTQCGRIQDAWEL----FKAMPMKSVVASNSMILGLGQNGE 176
E N +T +L + CG + W + FK + ++I G
Sbjct: 132 REGHELNPFVFTTILKLLVSMDCGEL--GWGIHACIFKLGHESNAFVGTALIDAYSVCGR 189
Query: 177 VQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSV 236
V AR VFD + KD +W+GM+ + E + LF+ M+ G + N + SV
Sbjct: 190 VDVAREVFDGILYKDMVSWTGMVTCFAENDCFKEALKLFSQMRMVGFKPNNFTFASVFKA 249
Query: 237 CASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMW 296
C L + D G+ VH ++ ++++D+YV L+ +Y K G++ + F+ KD++ W
Sbjct: 250 CLGLEAFDVGKSVHGCALKSRYELDLYVGVALLDLYTKSGDIDDARXAFEEIPKKDVIPW 309
Query: 297 NSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKS 356
+ +I+ YAQ ++++++F +M + V+P+ T VL AC+ + G +I
Sbjct: 310 SFMIARYAQSDQSKEAVEMFFQMRQALVLPNQFTFASVLQACATMEGLNLGNQI-HCHVI 368
Query: 357 KYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAE 416
K + ++D+ + G++E++M L P D W +++ H++L E
Sbjct: 369 KIGLHSDVFVSNALMDVYAKCGRMENSMXLFAESPHRNDVTPWNTVIVG---HVQLGDGE 425
Query: 417 VAAKKLLQL 425
A + L +
Sbjct: 426 KALRLFLNM 434
Score = 47.0 bits (110), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 53/279 (18%), Positives = 109/279 (39%), Gaps = 50/279 (17%)
Query: 226 NFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIF 285
N + + L C G+ +H ++++ +D++ ++L+ MY+K L +F
Sbjct: 37 NSHAYANALQDCIQKDEPSRGKGLHCEILKRGGCLDLFAWNILLNMYVKSDFLCDASKLF 96
Query: 286 DNFASKDIVMWNSIISGYAQYGLGEKSLKVF-------HEM------------------- 319
D ++ + + ++I GYA+ +++++F HE+
Sbjct: 97 DEMPERNTISFVTLIQGYAESVRFLEAIELFVRLHREGHELNPFVFTTILKLLVSMDCGE 156
Query: 320 ---------FSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACM 370
F G + ++ A S G+V RE+F+ + K +V + M
Sbjct: 157 LGWGIHACIFKLGHESNAFVGTALIDAYSVCGRVDVAREVFDGILYKDMVS-----WTGM 211
Query: 371 VDLLGRAGQVEDAMKLIEAM---PFEPDAIIWGSLLGACRTHMKLDLAE----VAAKKLL 423
V ++A+KL M F+P+ + S+ AC D+ + A K
Sbjct: 212 VTCFAENDCFKEALKLFSQMRMVGFKPNNFTFASVFKACLGLEAFDVGKSVHGCALKSRY 271
Query: 424 QLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVI 462
+L+ + L ++Y G D + + K++VI
Sbjct: 272 ELDLYVG---VALLDLYTKSGDIDDARXAFEEIPKKDVI 307
>gi|297805648|ref|XP_002870708.1| hypothetical protein ARALYDRAFT_493946 [Arabidopsis lyrata subsp.
lyrata]
gi|297316544|gb|EFH46967.1| hypothetical protein ARALYDRAFT_493946 [Arabidopsis lyrata subsp.
lyrata]
Length = 1111
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 199/459 (43%), Positives = 291/459 (63%), Gaps = 1/459 (0%)
Query: 134 TAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDA 193
T ++ Y + G + ++F ++ V +M+ + G+V AR +F+ M EKD
Sbjct: 155 TGLISLYAELGCLDSCHKVFNSVSYPDFVCRTAMVTACARCGDVAFARKLFEGMPEKDPI 214
Query: 194 TWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQL 253
W+ MI Y + G E ++LF LMQ EGV+VN S+ISVLS C L +LD GR H+ +
Sbjct: 215 AWNAMISGYAQVGESREALNLFHLMQLEGVKVNGVSMISVLSACTQLGALDQGRWAHSYI 274
Query: 254 VRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSL 313
R + + V + + L+ +Y KCG++ K +F K++ W+S ++G A G GEK L
Sbjct: 275 ERNKIKITVRLGTTLVDLYAKCGDMDKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCL 334
Query: 314 KVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDL 373
K+F M GV P+ VT V VL CS G V EG++ F+SM++++ +EP+ +HY C+VDL
Sbjct: 335 KLFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQKHFDSMRNEFGIEPQLDHYGCLVDL 394
Query: 374 LGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPY 433
RAG++EDA+ +I+ MP + A +W SLL A R + L+L +A+KK+L+LE N G Y
Sbjct: 395 YARAGRLEDAVSIIQQMPMKAHAAVWSSLLHASRMYKNLELGVLASKKMLELETSNHGAY 454
Query: 434 ILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMI 493
+LLSNIYA + +V+ +R++M+ + V K PGCS +EV +VH F D SHP++ I
Sbjct: 455 VLLSNIYADSDDWDNVSHVRQSMKSKGVRKQPGCSVMEVNGEVHEFFVGD-KSHPKYNEI 513
Query: 494 MRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRV 553
+ + I LR AGY D++ V+ D+DEEEK +L HSEK A+A+G++ L VPIR+
Sbjct: 514 DAVWKDISRRLRLAGYKADTTPVMFDIDEEEKEDALCLHSEKAAIAFGIMSLKADVPIRI 573
Query: 554 MKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDG 592
+KNLRVCGDCH +ISK+ REII+RD NRFHHFKDG
Sbjct: 574 VKNLRVCGDCHQVSMMISKIFNREIIVRDRNRFHHFKDG 612
Score = 350 bits (899), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 175/483 (36%), Positives = 290/483 (60%), Gaps = 6/483 (1%)
Query: 123 EVMPEKNEVSWTAMLMGYTQCGRIQDA----WELFKAMPMKSVVASNSMILGLGQNGEVQ 178
EV NEV++ +M+ G ++ + K+ ++ V N+++ G+ G++
Sbjct: 630 EVGFRPNEVTFLSMISACVHGGNKEEGVCIHGLVMKSGVLEEVKVVNALMNLYGKTGDLI 689
Query: 179 KARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCA 238
+ +F+ + K+ +W+ MI ++ + G E + F + + G++ + + ++VL VC
Sbjct: 690 SSCKLFEDLSVKNLVSWNTMIVIHLQNGLAEEGLAYFNMSRWVGLKPDQATFLAVLRVCE 749
Query: 239 SLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNS 298
+ + + +H ++ C F+ + + + L+ +Y K G L +F S D + W +
Sbjct: 750 DIGVVRLSQGIHGLIMFCGFNANTCITTALLDLYAKLGRLEDSSTVFLEITSPDSMAWTA 809
Query: 299 IISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKY 358
+++ YA +G G ++K F M G+ PD VT +L+ACS++G V+EGR FE+M +Y
Sbjct: 810 MLAAYATHGYGRDAIKHFELMVHYGLSPDHVTFTHLLNACSHSGLVEEGRYYFETMSKRY 869
Query: 359 LVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVA 418
+EP+ +HY+CMVDL+GR+G ++DA LI+ MP EP + +WG+LLGACR + L A
Sbjct: 870 RIEPRLDHYSCMVDLMGRSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKA 929
Query: 419 AKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHM 478
AK+L +LEP++ YI+LSNIY++ G + D + +R M+++ +++ G S+IE K+H
Sbjct: 930 AKRLFELEPRDGRNYIMLSNIYSASGLWKDASRIRNLMKQKGLVRASGYSYIEHGNKIHK 989
Query: 479 FTGRDCVSHPEHPMIMRMLEKIGGLLR-EAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLA 537
F D SHPE I + L++I ++ E G+ + FVLHDVDE+ K + HSEK+A
Sbjct: 990 FVVGDW-SHPESEKIQKKLKEIRKKMKSELGFKSRTEFVLHDVDEDVKEEMINQHSEKIA 1048
Query: 538 VAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCR 597
+A+GL+ + PI + KNLR+CGDCH K IS + R II+RD+ RFHHF +G CSCR
Sbjct: 1049 MAFGLLVISPMEPIIIRKNLRICGDCHETAKAISLIEKRRIIIRDSKRFHHFLEGSCSCR 1108
Query: 598 DYW 600
DYW
Sbjct: 1109 DYW 1111
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 129/292 (44%), Gaps = 47/292 (16%)
Query: 57 RRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRID 116
RR FD P QT ++ Y + G +D ++F+ + + + T M++ +
Sbjct: 144 RRGFDNDPH----VQTGLISLYAELGCLDSCHKVFNSVSYPDFVCRTAMVTACARCGDVA 199
Query: 117 VARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAM----------PMKSVVASNS 166
ARKLFE MPEK+ ++W AM+ GY Q G ++A LF M M SV+++ +
Sbjct: 200 FARKLFEGMPEKDPIAWNAMISGYAQVGESREALNLFHLMQLEGVKVNGVSMISVLSACT 259
Query: 167 MILGLGQN-----------------------------GEVQKARVVFDQMREKDDATWSG 197
+ L Q G++ KA VF M EK+ TWS
Sbjct: 260 QLGALDQGRWAHSYIERNKIKITVRLGTTLVDLYAKCGDMDKAMEVFWGMEEKNVYTWSS 319
Query: 198 MIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQ 257
+ G+ + + LF+LM+++GV N + +SVL C+ + +D G Q H +R +
Sbjct: 320 ALNGLAMNGFGEKCLKLFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEG-QKHFDSMRNE 378
Query: 258 FDVDVYV--ASVLITMYIKCGELVKGKLIFDNFASK-DIVMWNSIISGYAQY 306
F ++ + L+ +Y + G L I K +W+S++ Y
Sbjct: 379 FGIEPQLDHYGCLVDLYARAGRLEDAVSIIQQMPMKAHAAVWSSLLHASRMY 430
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 91/217 (41%), Gaps = 48/217 (22%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMP----EKNVVSWTVMLGGFIRDSRIDDA 56
MPE++ ++W AM+ GY + G EA LF M + N VS +L + +D
Sbjct: 208 MPEKDPIAWNAMISGYAQVGESREALNLFHLMQLEGVKVNGVSMISVLSACTQLGALDQG 267
Query: 57 RRLFDMMPEKDVVAQ----TNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
R + + T +V Y + G +D+ E+F M +KNV +W++ ++G N
Sbjct: 268 RWAHSYIERNKIKITVRLGTTLVDLYAKCGDMDKAMEVFWGMEEKNVYTWSSALNGLAMN 327
Query: 113 NRIDVARKLFEVMPEK----NEVSWTAMLMG----------------------------- 139
+ KLF +M + N V++ ++L G
Sbjct: 328 GFGEKCLKLFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQKHFDSMRNEFGIEPQLDH 387
Query: 140 -------YTQCGRIQDAWELFKAMPMKSVVASNSMIL 169
Y + GR++DA + + MPMK+ A S +L
Sbjct: 388 YGCLVDLYARAGRLEDAVSIIQQMPMKAHAAVWSSLL 424
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 108/260 (41%), Gaps = 49/260 (18%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMP 64
N TA++ Y + G + ++ T+F ++ + ++WT ML + DA + F++M
Sbjct: 772 NTCITTALLDLYAKLGRLEDSSTVFLEITSPDSMAWTAMLAAYATHGYGRDAIKHFELMV 831
Query: 65 E----KDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARK 120
D V T+++ G V+EGR F+ M K+
Sbjct: 832 HYGLSPDHVTFTHLLNACSHSGLVEEGRYYFETMSKR----------------------- 868
Query: 121 LFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGL------GQN 174
+ + P + S LMG + G +QDA+ L K MPM+ +LG Q
Sbjct: 869 -YRIEPRLDHYSCMVDLMG--RSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQL 925
Query: 175 GEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVL 234
G + A+ +F ++ +D + + +Y G + + LM+++G L
Sbjct: 926 G-TKAAKRLF-ELEPRDGRNYIMLSNIYSASGLWKDASRIRNLMKQKG-----------L 972
Query: 235 SVCASLASLDHGRQVHAQLV 254
+ + ++HG ++H +V
Sbjct: 973 VRASGYSYIEHGNKIHKFVV 992
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 65/309 (21%), Positives = 127/309 (41%), Gaps = 29/309 (9%)
Query: 78 YCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFE----VMPEKNEVSW 133
Y + G + ++F+++ KN++SW TMI ++ N + F V + ++ ++
Sbjct: 682 YGKTGDLISSCKLFEDLSVKNLVSWNTMIVIHLQNGLAEEGLAYFNMSRWVGLKPDQATF 741
Query: 134 TAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGL----GQNGEVQKARVVFDQMRE 189
A+L G ++ + + + A+ + L + G ++ + VF ++
Sbjct: 742 LAVLRVCEDIGVVRLSQGIHGLIMFCGFNANTCITTALLDLYAKLGRLEDSSTVFLEITS 801
Query: 190 KDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGR-- 247
D W+ M+ Y GY + I F LM G+ + + +L+ C+ ++ GR
Sbjct: 802 PDSMAWTAMLAAYATHGYGRDAIKHFELMVHYGLSPDHVTFTHLLNACSHSGLVEEGRYY 861
Query: 248 -QVHAQLVRCQFDVDVYVASVLITMYIKCGELVKG-KLIFDNFASKDIVMWNSIISG--- 302
+ ++ R + +D Y S ++ + + G L LI + +W +++
Sbjct: 862 FETMSKRYRIEPRLDHY--SCMVDLMGRSGLLQDAYGLIKEMPMEPSSGVWGALLGACRV 919
Query: 303 YAQYGLGEKSLKVFHEMFSSGVMPDD----VTLVGVLSACSYTGKVKEGREIFESMKSKY 358
Y LG K+ K E+ P D + L + SA +G K+ I MK K
Sbjct: 920 YKDTQLGTKAAKRLFEL-----EPRDGRNYIMLSNIYSA---SGLWKDASRIRNLMKQKG 971
Query: 359 LVEPKTEHY 367
LV Y
Sbjct: 972 LVRASGYSY 980
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 43/215 (20%), Positives = 94/215 (43%), Gaps = 20/215 (9%)
Query: 4 RNVVSWTAMVRGYVEEGMITEAGTLF----WQMPEKNVVSWTVMLG-----GFIRDSRID 54
+N+VSW M+ +++ G+ E F W + + ++ +L G +R S+
Sbjct: 701 KNLVSWNTMIVIHLQNGLAEEGLAYFNMSRWVGLKPDQATFLAVLRVCEDIGVVRLSQGI 760
Query: 55 DARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNR 114
+F + + L Y + GR+++ +F E+ + ++WT M++ Y +
Sbjct: 761 HGLIMFCGFNANTCITTALLDL-YAKLGRLEDSSTVFLEITSPDSMAWTAMLAAYATHGY 819
Query: 115 IDVARKLFEVMPE----KNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVAS-----N 165
A K FE+M + V++T +L + G +++ F+ M + + +
Sbjct: 820 GRDAIKHFELMVHYGLSPDHVTFTHLLNACSHSGLVEEGRYYFETMSKRYRIEPRLDHYS 879
Query: 166 SMILGLGQNGEVQKARVVFDQM-REKDDATWSGMI 199
M+ +G++G +Q A + +M E W ++
Sbjct: 880 CMVDLMGRSGLLQDAYGLIKEMPMEPSSGVWGALL 914
Score = 46.6 bits (109), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 86/194 (44%), Gaps = 14/194 (7%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDM---MPEK 66
A++ Y + G + + LF + KN+VSW M+ +++ ++ F+M + K
Sbjct: 676 NALMNLYGKTGDLISSCKLFEDLSVKNLVSWNTMIVIHLQNGLAEEGLAYFNMSRWVGLK 735
Query: 67 DVVAQTNMVLGYCQD---GRVDEGRE---IFDEMPKKNVISWTTMISGYVNNNRIDVARK 120
A VL C+D R+ +G +F I+ T ++ Y R++ +
Sbjct: 736 PDQATFLAVLRVCEDIGVVRLSQGIHGLIMFCGFNANTCIT-TALLDLYAKLGRLEDSST 794
Query: 121 LFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSV----VASNSMILGLGQNGE 176
+F + + ++WTAML Y G +DA + F+ M + V ++ +G
Sbjct: 795 VFLEITSPDSMAWTAMLAAYATHGYGRDAIKHFELMVHYGLSPDHVTFTHLLNACSHSGL 854
Query: 177 VQKARVVFDQMREK 190
V++ R F+ M ++
Sbjct: 855 VEEGRYYFETMSKR 868
>gi|115483184|ref|NP_001065185.1| Os10g0540100 [Oryza sativa Japonica Group]
gi|78708963|gb|ABB47938.1| PPR986-12, putative, expressed [Oryza sativa Japonica Group]
gi|113639794|dbj|BAF27099.1| Os10g0540100 [Oryza sativa Japonica Group]
gi|125575555|gb|EAZ16839.1| hypothetical protein OsJ_32311 [Oryza sativa Japonica Group]
gi|215704329|dbj|BAG93763.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 681
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 202/551 (36%), Positives = 326/551 (59%), Gaps = 10/551 (1%)
Query: 58 RLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNR--- 114
R FD + DV ++++ Y + G + + ++F MP+++ ++W+TM++G+V+ +
Sbjct: 133 RAFDAGYKDDVFVCSSLLHLYARWGAMGDAVKVFVRMPRRDRVTWSTMVAGFVSAGQPLD 192
Query: 115 -IDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDA----WELFKAMPMKSVVASNSMIL 169
I + R++ E + +EV ++ T ++ L + VV + S++
Sbjct: 193 AIQMYRRMREDGVKGDEVVMIGVIQACTAARNVRMGASVHGHLLRHGMRMDVVTATSLVD 252
Query: 170 GLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPS 229
+NG + A VF M ++D +WS MI + + G E + LF MQ G++ + +
Sbjct: 253 MYAKNGLLDVACRVFGLMVHRNDVSWSAMISGFAQNGQSDEALRLFRNMQASGIQPDSGA 312
Query: 230 LISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFA 289
L+S L C+++ L GR VH +VR +FD + + + I MY KCG L +++F+ +
Sbjct: 313 LVSALLACSNIGFLKLGRSVHGFIVR-RFDFNCILGTAAIDMYSKCGSLASAQMLFNMIS 371
Query: 290 SKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGRE 349
+D+++WN++I+ +G G+ +L +F EM +G+ PD T +LSA S++G V+EG+
Sbjct: 372 DRDLILWNAMIACCGAHGRGQDALTLFQEMNETGMRPDHATFASLLSALSHSGLVEEGKL 431
Query: 350 IFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTH 409
F M + + + P +HY C+VDLL R+G VE+A L+ +M EP IW +LL C +
Sbjct: 432 WFGRMVNHFKITPAEKHYVCLVDLLARSGLVEEASDLLTSMKAEPTVAIWVALLSGCLNN 491
Query: 410 MKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSW 469
KL+L E A +L+L+P + G L+SN+YA+ ++ V ++RK M+ K PGCS
Sbjct: 492 KKLELGESIADNILELQPDDVGVLALVSNLYAATKKWDKVRQVRKLMKDSGSKKMPGCSS 551
Query: 470 IEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSL 529
IE+ H+F D SHP+ I+ + K+ +R+ GY P + FV HD++EE K L
Sbjct: 552 IEIRGTRHVFVMED-QSHPQREEIVSKVAKLDLEMRKMGYIPRTEFVYHDLEEEVKEQQL 610
Query: 530 RYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHF 589
YHSE+LA+A+GL+ G + ++KNLRVCGDCH AIK ISK+ REI++RDA RFHHF
Sbjct: 611 SYHSERLAIAFGLLNTGPGTRLVIIKNLRVCGDCHDAIKYISKIADREIVVRDAKRFHHF 670
Query: 590 KDGLCSCRDYW 600
KDG+CSCRDYW
Sbjct: 671 KDGVCSCRDYW 681
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 90/386 (23%), Positives = 181/386 (46%), Gaps = 39/386 (10%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFI------RDSRID 54
MP R+ V+W+ MV G+V G +A ++ +M E V V++ G I R+ R+
Sbjct: 169 MPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMREDGVKGDEVVMIGVIQACTAARNVRMG 228
Query: 55 DA--RRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+ L DVV T++V Y ++G +D +F M +N +SW+ MISG+ N
Sbjct: 229 ASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDVACRVFGLMVHRNDVSWSAMISGFAQN 288
Query: 113 NRIDVARKLFEVM------PEKNEVSWTAML----MGYTQCGRIQDAWELFKAMPMKSVV 162
+ D A +LF M P+ + +A+L +G+ + GR + + + ++
Sbjct: 289 GQSDEALRLFRNMQASGIQPDSGALV-SALLACSNIGFLKLGRSVHGF-IVRRFDFNCIL 346
Query: 163 ASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEG 222
+ ++ + + G + A+++F+ + ++D W+ MI G + + LF M + G
Sbjct: 347 GTAAIDM-YSKCGSLASAQMLFNMISDRDLILWNAMIACCGAHGRGQDALTLFQEMNETG 405
Query: 223 VRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDV----YVASVLITMYIKCGEL 278
+R + + S+LS + ++ G+ ++V F + YV L+ + + G +
Sbjct: 406 MRPDHATFASLLSALSHSGLVEEGKLWFGRMVN-HFKITPAEKHYV--CLVDLLARSGLV 462
Query: 279 VKGKLIFDNF-ASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSS--GVMPDDVTLVGVL 335
+ + + A + +W +++SG L K L++ + + + PDDV ++ ++
Sbjct: 463 EEASDLLTSMKAEPTVAIWVALLSGC----LNNKKLELGESIADNILELQPDDVGVLALV 518
Query: 336 S----ACSYTGKVKEGREIFESMKSK 357
S A KV++ R++ + SK
Sbjct: 519 SNLYAATKKWDKVRQVRKLMKDSGSK 544
>gi|357509307|ref|XP_003624942.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499957|gb|AES81160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1092
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 214/614 (34%), Positives = 353/614 (57%), Gaps = 25/614 (4%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFI-----RDSRIDD 55
MP ++V SW AM+ G+ + G A + +M + V T+ + + D I+
Sbjct: 182 MPVKDVGSWNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVING 241
Query: 56 ARRLFDMMP---EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
++ + DV ++ Y + GR+ + + +FD+M ++++SW ++I+ Y N
Sbjct: 242 VLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQN 301
Query: 113 NRIDVARKLFEVM------PEK-NEVSWTAML--MGYTQCGRIQDAWELFKAMPMKSVVA 163
N A + F+ M P+ VS T++ + + R + + + K VV
Sbjct: 302 NDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVI 361
Query: 164 SNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGV 223
N+++ + G + A VFDQ+ KD +W+ ++ Y + G E ID + +M E
Sbjct: 362 GNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMM--EEC 419
Query: 224 RVNFP---SLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVK 280
R P + +S++ + + +L G ++HA+L++ +DV+VA+ LI +Y KCG L
Sbjct: 420 RDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLED 479
Query: 281 GKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSY 340
+F V WN+II+ +G GE++L++F +M + V D +T V +LSACS+
Sbjct: 480 AMSLFYEIPRDTSVPWNAIIASLGIHGRGEEALQLFKDMLAERVKADHITFVSLLSACSH 539
Query: 341 TGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWG 400
+G V EG++ F+ M+ +Y ++P +HY CMVDLLGRAG +E A +L+ MP +PDA IWG
Sbjct: 540 SGLVDEGQKCFDIMQKEYGIKPSLKHYGCMVDLLGRAGYLEKAYELVRNMPIQPDASIWG 599
Query: 401 SLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRN 460
+LL AC+ + +L +A+ +LL+++ +N G Y+LLSNIYA+ ++ V ++R R R
Sbjct: 600 ALLSACKIYGNAELGTLASDRLLEVDSENVGYYVLLSNIYANTEKWEGVIKVRSLARDRG 659
Query: 461 VIKPPGCSWIEVEKKVHMF-TGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHD 519
+ K PG S + V K +F TG +HP++ I + L+ + ++ GY PD SFV D
Sbjct: 660 LRKTPGWSSVVVGSKAEVFYTGNQ--THPKYTEIYKELKVLSAKMKSLGYVPDYSFVYQD 717
Query: 520 VDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREII 579
++E+EK L HSE+LA+A+G++ P PIR+ KNLRVCGDCH+A K IS++ REI+
Sbjct: 718 IEEDEKEQILNSHSERLAIAFGIISTPPRSPIRIFKNLRVCGDCHNATKYISRISEREIV 777
Query: 580 LRDANRFHHFKDGL 593
+RD+NRFHHFKDG+
Sbjct: 778 VRDSNRFHHFKDGI 791
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 111/459 (24%), Positives = 210/459 (45%), Gaps = 56/459 (12%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARR---- 58
+N+V T ++ YV G I+ + + F + +KN+ SW ++ ++R + +A
Sbjct: 51 SQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSWNSIISAYVRFGKYHEAMNCVNQ 110
Query: 59 ------------------------------------LFDMMPEKDVVAQTNMVLGYCQDG 82
+F M E DV ++V Y + G
Sbjct: 111 LFSMCGGGHLRPDFYTFPPILKACVSLVDGKKVHCCVFKMGFEDDVFVAASLVHLYSRYG 170
Query: 83 RVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMP----EKNEVSWTAMLM 138
+D ++F +MP K+V SW MISG+ N A + M + + ++ ++L
Sbjct: 171 VLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVASILP 230
Query: 139 GYTQCGRIQDA----WELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDAT 194
Q + + + K V SN++I + G +Q A++VFDQM +D +
Sbjct: 231 VCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVS 290
Query: 195 WSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLV 254
W+ +I YE+ + F MQ G+R + +++S+ S+ + L+ R + ++
Sbjct: 291 WNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVI 350
Query: 255 RCQ-FDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSL 313
R + D DV + + L+ MY K G + +FD KD + WN++++GY Q GL +++
Sbjct: 351 RREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAI 410
Query: 314 KVFHEMFSS-GVMPDDVTLVGVLSACSYTGKVKEGREIFESM--KSKYLVEPKTEHYACM 370
++ M +P+ T V ++ A S+ G +++G +I + S YL C+
Sbjct: 411 DAYNMMEECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYL---DVFVATCL 467
Query: 371 VDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTH 409
+DL G+ G++EDAM L +P + ++ W +++ + H
Sbjct: 468 IDLYGKCGRLEDAMSLFYEIPRD-TSVPWNAIIASLGIH 505
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 86/175 (49%), Gaps = 10/175 (5%)
Query: 239 SLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNS 298
S +++ +++HA L+ ++ +++ LI +Y+ G++ + FD K+I WNS
Sbjct: 31 SCVNVNATKKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSWNS 90
Query: 299 IISGYAQYGLGEKSLKVFHEMFS----SGVMPDDVTLVGVLSACSYTGKVKEGREIFESM 354
IIS Y ++G +++ +++FS + PD T +L AC + +G+++
Sbjct: 91 IISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACV---SLVDGKKV-HCC 146
Query: 355 KSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL-GACRT 408
K E A +V L R G ++ A K+ MP + D W +++ G C+
Sbjct: 147 VFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVK-DVGSWNAMISGFCQN 200
>gi|449525261|ref|XP_004169636.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Cucumis sativus]
Length = 650
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 215/601 (35%), Positives = 332/601 (55%), Gaps = 61/601 (10%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV--VSWTVMLGGFIRDSRIDDARRLFDM 62
N WTAM+RGY +G+++E+ + +M V VS+T + +M
Sbjct: 106 NPFLWTAMIRGYALQGLLSESTNFYTRMRRDGVGPVSFTF-------SALFKACGAALNM 158
Query: 63 MPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLF 122
K V AQT ++ G+ D YV N+ ID+
Sbjct: 159 DLGKQVHAQTILIGGFASDL--------------------------YVGNSMIDL----- 187
Query: 123 EVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARV 182
Y +CG + A ++F M + VV+ +I+ + G+++ A
Sbjct: 188 -----------------YVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASG 230
Query: 183 VFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLAS 242
+FD + KD W+ M+ Y + G E ++ F MQ G+ + +L V+S CA L +
Sbjct: 231 LFDDLPSKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGA 290
Query: 243 LDHGRQVHAQLVRCQF--DVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSII 300
+ H + R F +V V S LI MY KCG + +F+ +++ ++S+I
Sbjct: 291 VKHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMI 350
Query: 301 SGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLV 360
GYA +G +L++FH+M + + P+ VT +G+LSACS+ G V++GR++F M+ + V
Sbjct: 351 LGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLFAKMEKFFGV 410
Query: 361 EPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAK 420
P +HYACMVDLLGRAG +E+A+ L++ MP EP+ +WG+LLGACR H D+A++AA
Sbjct: 411 APSPDHYACMVDLLGRAGCLEEALDLVKTMPMEPNGGVWGALLGACRIHGNPDIAQIAAN 470
Query: 421 KLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEK-KVHMF 479
+L +LEP G YILLSNIYAS GR+ +V++LRK +R++ K PGCSW E + ++H F
Sbjct: 471 ELFKLEPNGIGNYILLSNIYASAGRWEEVSKLRKVIREKGFKKNPGCSWFEGKNGEIHDF 530
Query: 480 TGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVA 539
D +HP I + L+++ LR GY P+ +D+ ++EK L HSEKLA+A
Sbjct: 531 FAGD-TTHPRSSEIRQALKQLIERLRSHGYKPNLGSAPYDLTDDEKERILMSHSEKLALA 589
Query: 540 YGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDY 599
YGL+ G I++MKN+R+C DCH+ + S++ GREII+RD RFHHF +G CSC ++
Sbjct: 590 YGLLCTEAGDTIKIMKNIRICEDCHNVMCAASEITGREIIVRDNMRFHHFHNGTCSCGNF 649
Query: 600 W 600
W
Sbjct: 650 W 650
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 132/272 (48%), Gaps = 42/272 (15%)
Query: 182 VVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLA 241
+VF Q+ + W+ MI+ Y +G E + +T M+++GV + ++ C +
Sbjct: 97 LVFGQVNYPNPFLWTAMIRGYALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAAL 156
Query: 242 SLDHGRQVHAQLVRC-QFDVDVYVASVLITMYIKCG---------------------ELV 279
++D G+QVHAQ + F D+YV + +I +Y+KCG EL+
Sbjct: 157 NMDLGKQVHAQTILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELI 216
Query: 280 ----------KGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDV 329
+FD+ SKD+V W ++++GYAQ G +++L+ F +M G+ D+V
Sbjct: 217 VAYAKYGDMESASGLFDDLPSKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEV 276
Query: 330 TLVGVLSACSYTGKVKEG---REIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKL 386
TL GV+SAC+ G VK R+I E +S + + ++D+ + G ++A K+
Sbjct: 277 TLAGVISACAQLGAVKHANWIRDIAE--RSGFGPSGNVVVGSALIDMYSKCGSPDEAYKV 334
Query: 387 IEAMP----FEPDAIIWGSLLGACRTHMKLDL 414
E M F ++I G + R H L L
Sbjct: 335 FEVMKERNVFSYSSMILGYAMHG-RAHSALQL 365
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 111/240 (46%), Gaps = 19/240 (7%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
M ER+VVSWT ++ Y + G + A LF +P K++V+WT M+ G+ ++ R +A F
Sbjct: 204 MSERDVVSWTELIVAYAKYGDMESASGLFDDLPSKDMVAWTAMVTGYAQNGRPKEALEYF 263
Query: 61 DMMP----EKDVVAQTNMVLGYCQDGRVDEGREIFDEM------PKKNVISWTTMISGYV 110
M E D V ++ Q G V I D P NV+ + +I Y
Sbjct: 264 QKMQDVGMETDEVTLAGVISACAQLGAVKHANWIRDIAERSGFGPSGNVVVGSALIDMYS 323
Query: 111 NNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILG 170
D A K+FEVM E+N S+++M++GY GR A +LF M + + +G
Sbjct: 324 KCGSPDEAYKVFEVMKERNVFSYSSMILGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIG 383
Query: 171 L----GQNGEVQKARVVFDQMRE-----KDDATWSGMIKVYERKGYELEVIDLFTLMQKE 221
+ G V++ R +F +M + ++ M+ + R G E +DL M E
Sbjct: 384 ILSACSHAGLVEQGRQLFAKMEKFFGVAPSPDHYACMVDLLGRAGCLEEALDLVKTMPME 443
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 100/233 (42%), Gaps = 15/233 (6%)
Query: 230 LISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGK---LIFD 286
L+S+L C + + +QVHA ++R YV + LI M K ++ G L+F
Sbjct: 45 LMSILHDCTLFSQI---KQVHAHIIRNGLSQCSYVLTKLIRMLTKV-DVPMGSYPLLVFG 100
Query: 287 NFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKE 346
+ +W ++I GYA GL +S + M GV P T + AC +
Sbjct: 101 QVNYPNPFLWTAMIRGYALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDL 160
Query: 347 GREIFESMKSKYLVEPKTEHYA--CMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLG 404
G+++ ++ + ++ Y M+DL + G + A K+ + M E D + W L+
Sbjct: 161 GKQV--HAQTILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMS-ERDVVSWTELIV 217
Query: 405 ACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMR 457
A + K E A+ L K+ + + YA GR + E + M+
Sbjct: 218 A---YAKYGDMESASGLFDDLPSKDMVAWTAMVTGYAQNGRPKEALEYFQKMQ 267
>gi|224111152|ref|XP_002315764.1| predicted protein [Populus trichocarpa]
gi|222864804|gb|EEF01935.1| predicted protein [Populus trichocarpa]
Length = 452
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 196/452 (43%), Positives = 286/452 (63%), Gaps = 1/452 (0%)
Query: 149 AWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYE 208
A +LF + +++V +MI G + G V+ AR++FDQM EKD WS MI Y
Sbjct: 2 AQKLFTKISSRNLVVLTAMISGYSRVGRVEDARLIFDQMEEKDLVCWSAMISGYAESDKP 61
Query: 209 LEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVL 268
E ++LF+ MQ G++ + +++SV+S CA L LD + +H + + + V + L
Sbjct: 62 QEALNLFSEMQVFGIKPDQVTILSVISACARLGVLDRAKWIHMYVDKNGLGGALPVNNAL 121
Query: 269 ITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDD 328
I MY KCG L + +F+ S++++ W S+I+ +A +G +LK F++M + P+
Sbjct: 122 IDMYAKCGNLGAARGVFEKMQSRNVISWTSMINAFAIHGDASNALKFFYQMKDENIKPNG 181
Query: 329 VTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIE 388
VT VGVL ACS+ G V+EGR F SM +++ + PK EHY CMVDL GRA + DA++L+E
Sbjct: 182 VTFVGVLYACSHAGLVEEGRRTFASMTNEHNITPKHEHYGCMVDLFGRANLLRDALELVE 241
Query: 389 AMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHD 448
MP P+ +IWGSL+ AC+ H + +L E AAK++L+LEP + G + LSNIYA R+ D
Sbjct: 242 TMPLAPNVVIWGSLMAACQIHGENELGEFAAKQVLELEPDHDGALVQLSNIYAKDRRWQD 301
Query: 449 VAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAG 508
V ELR M++R + K GCS IE+ +V+ F D H + I L+++ L+ G
Sbjct: 302 VGELRNLMKQRGISKERGCSRIELNNQVYEFVMAD-KKHKQADKIYEKLDEVVKELKLVG 360
Query: 509 YCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIK 568
Y P++ VL DV+EE K + +HSEKLA+ YGL+ +G IR++KNLRVC DCH+ IK
Sbjct: 361 YTPNTRSVLVDVEEEGKKEVVLWHSEKLALCYGLMGEGKGSCIRIVKNLRVCEDCHTFIK 420
Query: 569 LISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
L+SKV G EII+RD RFHH+K G+CSC DYW
Sbjct: 421 LVSKVYGMEIIVRDRTRFHHYKAGVCSCNDYW 452
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 110/212 (51%), Gaps = 18/212 (8%)
Query: 56 ARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRI 115
A++LF + +++V T M+ GY + GRV++ R IFD+M +K+++ W+ MISGY +++
Sbjct: 2 AQKLFTKISSRNLVVLTAMISGYSRVGRVEDARLIFDQMEEKDLVCWSAMISGYAESDKP 61
Query: 116 DVARKLFEVMP----EKNEVSWTAMLMGYTQCGRIQDA-W--------ELFKAMPMKSVV 162
A LF M + ++V+ +++ + G + A W L A+P+
Sbjct: 62 QEALNLFSEMQVFGIKPDQVTILSVISACARLGVLDRAKWIHMYVDKNGLGGALPV---- 117
Query: 163 ASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEG 222
+N++I + G + AR VF++M+ ++ +W+ MI + G + F M+ E
Sbjct: 118 -NNALIDMYAKCGNLGAARGVFEKMQSRNVISWTSMINAFAIHGDASNALKFFYQMKDEN 176
Query: 223 VRVNFPSLISVLSVCASLASLDHGRQVHAQLV 254
++ N + + VL C+ ++ GR+ A +
Sbjct: 177 IKPNGVTFVGVLYACSHAGLVEEGRRTFASMT 208
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 105/235 (44%), Gaps = 17/235 (7%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
+ RN+V TAM+ GY G + +A +F QM EK++V W+ M+ G+ + +A LF
Sbjct: 9 ISSRNLVVLTAMISGYSRVGRVEDARLIFDQMEEKDLVCWSAMISGYAESDKPQEALNLF 68
Query: 61 DMMP----EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISW----TTMISGYVNN 112
M + D V +++ + G +D + I + K + +I Y
Sbjct: 69 SEMQVFGIKPDQVTILSVISACARLGVLDRAKWIHMYVDKNGLGGALPVNNALIDMYAKC 128
Query: 113 NRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGL- 171
+ AR +FE M +N +SWT+M+ + G +A + F M +++ + +G+
Sbjct: 129 GNLGAARGVFEKMQSRNVISWTSMINAFAIHGDASNALKFFYQMKDENIKPNGVTFVGVL 188
Query: 172 ---GQNGEVQKARVVFDQMREKDDAT-----WSGMIKVYERKGYELEVIDLFTLM 218
G V++ R F M + + T + M+ ++ R + ++L M
Sbjct: 189 YACSHAGLVEEGRRTFASMTNEHNITPKHEHYGCMVDLFGRANLLRDALELVETM 243
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 82/175 (46%), Gaps = 15/175 (8%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV----VSWTVMLGGFIRDSRIDDA 56
M RNV+SWT+M+ + G + A F+QM ++N+ V++ +L +++
Sbjct: 141 MQSRNVISWTSMINAFAIHGDASNALKFFYQMKDENIKPNGVTFVGVLYACSHAGLVEEG 200
Query: 57 RRLFDMMPEKDVVAQTNMVLGYCQD--GRVD---EGREIFDEMP-KKNVISWTTMISGYV 110
RR F M + + + G D GR + + E+ + MP NV+ W ++++
Sbjct: 201 RRTFASMTNEHNITPKHEHYGCMVDLFGRANLLRDALELVETMPLAPNVVIWGSLMAACQ 260
Query: 111 NNNRIDV----ARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSV 161
+ ++ A+++ E+ P+ ++ + + Y + R QD EL M + +
Sbjct: 261 IHGENELGEFAAKQVLELEPD-HDGALVQLSNIYAKDRRWQDVGELRNLMKQRGI 314
>gi|359487704|ref|XP_002276220.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Vitis vinifera]
Length = 585
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 213/547 (38%), Positives = 327/547 (59%), Gaps = 14/547 (2%)
Query: 65 EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLF-E 123
+ ++ T +V Y + + +FD+MP++N++SW +MI G+ +NN D A +F +
Sbjct: 42 DANIFVGTALVDMYAKCADMHSAVRVFDQMPERNLVSWNSMIVGFFHNNLYDRAVGVFKD 101
Query: 124 VMPEK----NEVSWTAML-----MGYTQCGR-IQDAWELFKAMPMKSVVASNSMILGLGQ 173
V+ EK NEVS +++L MG GR + F +P+ V+ NS++ +
Sbjct: 102 VLREKTVIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKFGLVPLTYVM--NSLMDMYFK 159
Query: 174 NGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISV 233
+ +F + ++D TW+ ++ + + E + F +M++EG+ + S +V
Sbjct: 160 CRFFDEGVKLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTV 219
Query: 234 LSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDI 293
L ASLA+L G +H Q+++ + ++ + LITMY KCG LV +F+ ++
Sbjct: 220 LHSSASLAALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNV 279
Query: 294 VMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFES 353
+ W ++IS Y +G + +++F M S G+ P VT V VLSACS+TG+V+EG F S
Sbjct: 280 ISWTAMISAYQLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACSHTGRVEEGLAHFNS 339
Query: 354 MKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLD 413
MK + + P EHYACMVDLLGRAG +++A + IE+MP +P +WG+LLGACR + L
Sbjct: 340 MKKIHDMNPGPEHYACMVDLLGRAGWLDEAKRFIESMPMKPTPSVWGALLGACRKYGNLK 399
Query: 414 LAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVE 473
+ AA++L ++EP N G Y+LL+N+ GR + E+R+ M V K PGCSWI+V+
Sbjct: 400 MGREAAERLFEMEPYNPGNYVLLANMCTRSGRLEEANEVRRLMGVNGVRKEPGCSWIDVK 459
Query: 474 KKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHS 533
+FT D SH I +MLEK+ L+++ GY ++ FV + ++E E+ L YHS
Sbjct: 460 NMTFVFTAHD-RSHSSSDEIYKMLEKLEKLVKKKGYVAETEFVTNHLEENEEEQGLWYHS 518
Query: 534 EKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGL 593
EKLA+A+GL+ LP PIR+ KNLR CG CH+ +KL SK+ REII+RD NRFH F DG
Sbjct: 519 EKLALAFGLLTLPIDSPIRIKKNLRTCGHCHTVMKLASKIFDREIIVRDINRFHRFADGF 578
Query: 594 CSCRDYW 600
CSC DYW
Sbjct: 579 CSCGDYW 585
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 89/402 (22%), Positives = 180/402 (44%), Gaps = 59/402 (14%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF-D 61
+ N+ TA+V Y + + A +F QMPE+N+VSW M+ GF ++ D A +F D
Sbjct: 42 DANIFVGTALVDMYAKCADMHSAVRVFDQMPERNLVSWNSMIVGFFHNNLYDRAVGVFKD 101
Query: 62 MMPEKDVV---AQTNMVLGYCQD-GRVDEGREIFDEMPKKNVISWT----TMISGYVNNN 113
++ EK V+ + VL C + G ++ GR++ + K ++ T +++ Y
Sbjct: 102 VLREKTVIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKFGLVPLTYVMNSLMDMYFKCR 161
Query: 114 RIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAM----------PMKSVVA 163
D KLF+ + +++ V+W ++MG+ Q + ++A F M +V+
Sbjct: 162 FFDEGVKLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVLH 221
Query: 164 SNSMILGLGQN-----------------------------GEVQKARVVFDQMREKDDAT 194
S++ + L Q G + A VF+ + + + +
Sbjct: 222 SSASLAALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVIS 281
Query: 195 WSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLV 254
W+ MI Y+ G +VI+LF M EG+ + + + VLS C+ ++ G H +
Sbjct: 282 WTAMISAYQLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACSHTGRVEEG-LAHFNSM 340
Query: 255 RCQFDVDVYVA--SVLITMYIKCGELVKGKLIFDNFASKDI-VMWNSIISGYAQYG---L 308
+ D++ + ++ + + G L + K ++ K +W +++ +YG +
Sbjct: 341 KKIHDMNPGPEHYACMVDLLGRAGWLDEAKRFIESMPMKPTPSVWGALLGACRKYGNLKM 400
Query: 309 GEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREI 350
G ++ + EM P + L+ + C+ +G+++E E+
Sbjct: 401 GREAAERLFEM--EPYNPGNYVLLA--NMCTRSGRLEEANEV 438
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 103/187 (55%), Gaps = 3/187 (1%)
Query: 218 MQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGE 277
M+ G N + S+LS A+ + HG+Q+H+ + + FD +++V + L+ MY KC +
Sbjct: 1 MRCSGPYPNQFTFSSILSASAATMMVLHGQQLHSLIHKHGFDANIFVGTALVDMYAKCAD 60
Query: 278 LVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMF-SSGVMPDDVTLVGVLS 336
+ +FD +++V WNS+I G+ L ++++ VF ++ V+P++V++ VLS
Sbjct: 61 MHSAVRVFDQMPERNLVSWNSMIVGFFHNNLYDRAVGVFKDVLREKTVIPNEVSVSSVLS 120
Query: 337 ACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDA 396
AC+ G + GR++ + K+ + P T ++D+ + ++ +KL + + + D
Sbjct: 121 ACANMGGLNFGRQV-HGVVVKFGLVPLTYVMNSLMDMYFKCRFFDEGVKLFQCVG-DRDV 178
Query: 397 IIWGSLL 403
+ W L+
Sbjct: 179 VTWNVLV 185
>gi|296089060|emb|CBI38763.3| unnamed protein product [Vitis vinifera]
Length = 719
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 232/699 (33%), Positives = 345/699 (49%), Gaps = 152/699 (21%)
Query: 20 GMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYC 79
G + +A LF MP+++ SW M+G + R+++AR+LF P + + ++++ GYC
Sbjct: 55 GRVDDARKLFDVMPDRDECSWNTMIGAYANSGRLNEARKLFYETPIRSCITWSSLISGYC 114
Query: 80 QDGRVDEGREIFDEMP----KKNVISW--------------------------------- 102
+ G E E+F EM + N +W
Sbjct: 115 RYGCDVEALELFWEMQYEGERPNQFTWGSVLRVCSMYVLLEKGKQIHAHAIKTQFDSNAF 174
Query: 103 --TTMISGYVNNNRIDVARKLFEVMPEK-NEVSWTAMLMGYTQCGRIQDAWELFKAM--- 156
T ++ Y I A LFE+ P+K N V WTAM+ GY+Q G A E F+ M
Sbjct: 175 VVTGLVDMYAKCKCILEAEYLFELAPDKRNHVLWTAMVTGYSQNGDGHKAIECFRDMRGE 234
Query: 157 -------PMKSVVASNSMIL---------------GLGQN--------------GEVQKA 180
S++ + I G G N G++ A
Sbjct: 235 GIECNQFTFPSILTACGSISACGFGAQVHGCIVRSGFGANVFVGSALVDMYSKCGDLSNA 294
Query: 181 RVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVN---FPSLISVLSVC 237
R + + M D +W+ MI R+G E + LF +M ++++ +PSL++
Sbjct: 295 RRMLETMEVDDPVSWNSMIVGCVRQGLGEEALSLFRIMHLRHMKIDEFTYPSLVN----- 349
Query: 238 ASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWN 297
+ L+ MY K G +F+ KD++ W
Sbjct: 350 ----------------------------NALVDMYAKRGYFDYAFDVFEKMTDKDVISWT 381
Query: 298 SIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYT---------------- 341
S+++G G E++L++F EM G+ PD + + VLSA +
Sbjct: 382 SLVTGCVHNGSYEEALRLFCEMRIMGIHPDQIVIAAVLSALDNSLVSMYAKCGCIEDANK 441
Query: 342 --------------------GKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVE 381
+ GR+ F+SM+ Y ++P EHYACM+DLLGR+G++
Sbjct: 442 VFDSMEIQDVITWTALIVGYAQNGRGRDYFQSMEEVYGIKPGPEHYACMIDLLGRSGKLM 501
Query: 382 DAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYA 441
+A +L+ M +PDA +W +LL ACR H ++L E AA L +LEPKNA PY+LLSN+Y+
Sbjct: 502 EAKELLNQMAVQPDATVWKALLAACRVHGNVELGERAANNLFELEPKNAVPYVLLSNLYS 561
Query: 442 SQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIG 501
+ G++ + A+ R+ M+ R V K PGCSWIE+ KVH F D SHP I +++I
Sbjct: 562 AAGKWEEAAKTRRLMKLRGVSKEPGCSWIEMSSKVHRFMSED-RSHPRTAEIYSKVDEIM 620
Query: 502 GLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCG 561
L++EAGY PD +F LHD+DEE K L YHSEKLAVA+GL+ +P G PIR+ KNLR+CG
Sbjct: 621 ILIKEAGYVPDMNFALHDMDEEGKELGLAYHSEKLAVAFGLLTMPPGAPIRIFKNLRICG 680
Query: 562 DCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
DCH+A+K +S V R +ILRD+N FHHF++G CSC DYW
Sbjct: 681 DCHTAMKYVSGVFHRHVILRDSNCFHHFREGACSCSDYW 719
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 122/445 (27%), Positives = 216/445 (48%), Gaps = 32/445 (7%)
Query: 43 MLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISW 102
+L + R+DDAR+LFD+MP++D + M+ Y GR++E R++F E P ++ I+W
Sbjct: 47 VLSNLSKCGRVDDARKLFDVMPDRDECSWNTMIGAYANSGRLNEARKLFYETPIRSCITW 106
Query: 103 TTMISGYVNNNRIDVARKLFEVMP----EKNEVSWTAMLMGYTQCGRIQDAWELFKAMPM 158
+++ISGY A +LF M N+ +W ++L + ++ ++ A +
Sbjct: 107 SSLISGYCRYGCDVEALELFWEMQYEGERPNQFTWGSVLRVCSMYVLLEKGKQI-HAHAI 165
Query: 159 KSVVASNSMIL-GL----GQNGEVQKARVVFDQMREK-DDATWSGMIKVYERKGYELEVI 212
K+ SN+ ++ GL + + +A +F+ +K + W+ M+ Y + G + I
Sbjct: 166 KTQFDSNAFVVTGLVDMYAKCKCILEAEYLFELAPDKRNHVLWTAMVTGYSQNGDGHKAI 225
Query: 213 DLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMY 272
+ F M+ EG+ N + S+L+ C S+++ G QVH +VR F +V+V S L+ MY
Sbjct: 226 ECFRDMRGEGIECNQFTFPSILTACGSISACGFGAQVHGCIVRSGFGANVFVGSALVDMY 285
Query: 273 IKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLV 332
KCG+L + + + D V WNS+I G + GLGE++L +F M + D+ T
Sbjct: 286 SKCGDLSNARRMLETMEVDDPVSWNSMIVGCVRQGLGEEALSLFRIMHLRHMKIDEFTYP 345
Query: 333 GVLSACSYTGKVKEGR-----EIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKL- 386
+++ K G ++FE M K ++ + C+ + G E+A++L
Sbjct: 346 SLVNNALVDMYAKRGYFDYAFDVFEKMTDKDVISWTSLVTGCVHN-----GSYEEALRLF 400
Query: 387 --IEAMPFEPDAIIWGSLLGACRTHM-----KLDLAEVAAKKLLQLEPKNAGPYILLSNI 439
+ M PD I+ ++L A + K E A K +E ++ + L
Sbjct: 401 CEMRIMGIHPDQIVIAAVLSALDNSLVSMYAKCGCIEDANKVFDSMEIQDVITWTALIVG 460
Query: 440 YASQGRFHDVAELRKNMRKRNVIKP 464
YA GR D + +M + IKP
Sbjct: 461 YAQNGRGRDYFQ---SMEEVYGIKP 482
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 98/205 (47%), Gaps = 27/205 (13%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM------PEKNVVSWTV------MLGGFI 48
M +++V+SWT++V G V G EA LF +M P++ V++ + ++ +
Sbjct: 372 MTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIMGIHPDQIVIAAVLSALDNSLVSMYA 431
Query: 49 RDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVIS-----WT 103
+ I+DA ++FD M +DV+ T +++GY Q+GR GR+ F M + I +
Sbjct: 432 KCGCIEDANKVFDSMEIQDVITWTALIVGYAQNGR---GRDYFQSMEEVYGIKPGPEHYA 488
Query: 104 TMISGYVNNNRIDVARKLFEVMP-EKNEVSWTAMLMGYTQCGRIQ----DAWELFKAMPM 158
MI + ++ A++L M + + W A+L G ++ A LF+ P
Sbjct: 489 CMIDLLGRSGKLMEAKELLNQMAVQPDATVWKALLAACRVHGNVELGERAANNLFELEPK 548
Query: 159 KSV--VASNSMILGLGQNGEVQKAR 181
+V V +++ G+ E K R
Sbjct: 549 NAVPYVLLSNLYSAAGKWEEAAKTR 573
>gi|357160830|ref|XP_003578890.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Brachypodium distachyon]
Length = 631
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 206/543 (37%), Positives = 326/543 (60%), Gaps = 11/543 (2%)
Query: 67 DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMP 126
D + ++ Y + GR D R +FD M ++++SW TMI+GY ++ A KLF M
Sbjct: 91 DTLTCNILINLYTKCGRNDCARLVFDIMHVRSIVSWNTMIAGYTHSGEDVQALKLFSRMH 150
Query: 127 EK----NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSM----ILGL-GQNGEV 177
+ +E + ++ + I + +L + +K + SNS IL + + +
Sbjct: 151 REGTHMSEFTLSSTICACAAKYAINECKQL-HTIALKLALDSNSFVGTAILDVYAKCNMI 209
Query: 178 QKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVC 237
+ A VF++M E+ TWS + Y + G E + LF Q+EGV + +L ++LS C
Sbjct: 210 KDACWVFEKMPERTLVTWSSLFAGYVQNGLHEEALHLFRCAQREGVELTEFTLSAILSAC 269
Query: 238 ASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWN 297
ASLA G Q+HA +++C F + +VA+ L+ +Y +CG++ K +F K++V+WN
Sbjct: 270 ASLALKIEGIQLHAVILKCGFHGNFFVAASLVDVYARCGQIEKAYALFAYMEHKNVVIWN 329
Query: 298 SIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSK 357
++I+ ++++ +++ +F +M G+ P++VT + VLS CS+ G V++GR F + S
Sbjct: 330 AMIASFSRHAHSWEAMILFEKMQQLGIFPNEVTYLSVLSVCSHAGLVEKGRHYFSLLMSD 389
Query: 358 YLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEV 417
VEP HY+CMVD+LGR+G+ ++A +L+ MPFEP A +WGSLLG+CR + + LA +
Sbjct: 390 RTVEPNVLHYSCMVDVLGRSGKTDEAWELLNKMPFEPTASMWGSLLGSCRNYNNIRLARI 449
Query: 418 AAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVH 477
AA++L QLEP N G ++LLSN+YA+ G + +V RK ++ K G SWIE + KVH
Sbjct: 450 AAEQLFQLEPDNGGNHVLLSNVYAASGNWENVLMARKYLKDSGAKKEMGRSWIEAKGKVH 509
Query: 478 MFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLA 537
+F + HP I LE+I +R+ LHDV E+K L++HSEKLA
Sbjct: 510 VFVVGE-RKHPRITDIYNKLEEIYHEMRKFARRTSIECDLHDVHAEQKEELLKHHSEKLA 568
Query: 538 VAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCR 597
+++GL+ LP +PI + KNLR+CGDCHS +K+ + + R +I+RD NRFHHFKDG CSC
Sbjct: 569 LSFGLISLPSNIPIIIHKNLRICGDCHSFMKIAAHITERLVIVRDTNRFHHFKDGSCSCG 628
Query: 598 DYW 600
D+W
Sbjct: 629 DFW 631
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 122/270 (45%), Gaps = 16/270 (5%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFI----RDSRIDDA 56
M R++VSW M+ GY G +A LF +M + L I I++
Sbjct: 118 MHVRSIVSWNTMIAGYTHSGEDVQALKLFSRMHREGTHMSEFTLSSTICACAAKYAINEC 177
Query: 57 RRL----FDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
++L + + + T ++ Y + + + +F++MP++ +++W+++ +GYV N
Sbjct: 178 KQLHTIALKLALDSNSFVGTAILDVYAKCNMIKDACWVFEKMPERTLVTWSSLFAGYVQN 237
Query: 113 NRIDVARKLFEVMP----EKNEVSWTAMLMGYTQCGR----IQDAWELFKAMPMKSVVAS 164
+ A LF E E + +A+L IQ + K + +
Sbjct: 238 GLHEEALHLFRCAQREGVELTEFTLSAILSACASLALKIEGIQLHAVILKCGFHGNFFVA 297
Query: 165 NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVR 224
S++ + G+++KA +F M K+ W+ MI + R + E + LF MQ+ G+
Sbjct: 298 ASLVDVYARCGQIEKAYALFAYMEHKNVVIWNAMIASFSRHAHSWEAMILFEKMQQLGIF 357
Query: 225 VNFPSLISVLSVCASLASLDHGRQVHAQLV 254
N + +SVLSVC+ ++ GR + L+
Sbjct: 358 PNEVTYLSVLSVCSHAGLVEKGRHYFSLLM 387
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 85/180 (47%), Gaps = 2/180 (1%)
Query: 225 VNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLI 284
++ ++ L +CA SL G+ H + D ++LI +Y KCG +L+
Sbjct: 55 IDVSAISQRLQLCAKRKSLLVGKSCHGLAIHFGLVTDTLTCNILINLYTKCGRNDCARLV 114
Query: 285 FDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKV 344
FD + IV WN++I+GY G ++LK+F M G + TL + AC+ +
Sbjct: 115 FDIMHVRSIVSWNTMIAGYTHSGEDVQALKLFSRMHREGTHMSEFTLSSTICACAAKYAI 174
Query: 345 KEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLG 404
E +++ ++ K ++ + ++D+ + ++DA + E MP E + W SL
Sbjct: 175 NECKQL-HTIALKLALDSNSFVGTAILDVYAKCNMIKDACWVFEKMP-ERTLVTWSSLFA 232
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 119/282 (42%), Gaps = 28/282 (9%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVV 69
TA++ Y + MI +A +F +MPE+ +V+W+ + G++++ ++A LF + V
Sbjct: 197 TAILDVYAKCNMIKDACWVFEKMPERTLVTWSSLFAGYVQNGLHEEALHLFRCAQREGVE 256
Query: 70 A---QTNMVLGYCQDGRVD-EGREIFDEMPK----KNVISWTTMISGYVNNNRIDVARKL 121
+ +L C + EG ++ + K N +++ Y +I+ A L
Sbjct: 257 LTEFTLSAILSACASLALKIEGIQLHAVILKCGFHGNFFVAASLVDVYARCGQIEKAYAL 316
Query: 122 FEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGL----GQNGEV 177
F M KN V W AM+ +++ +A LF+ M + + L + G V
Sbjct: 317 FAYMEHKNVVIWNAMIASFSRHAHSWEAMILFEKMQQLGIFPNEVTYLSVLSVCSHAGLV 376
Query: 178 QKARVVF-----DQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLIS 232
+K R F D+ E + +S M+ V R G E +L M E + SL
Sbjct: 377 EKGRHYFSLLMSDRTVEPNVLHYSCMVDVLGRSGKTDEAWELLNKMPFEPTASMWGSL-- 434
Query: 233 VLSVCASLASLDHGRQVHAQLVRCQFD--------VDVYVAS 266
L C + ++ R QL + + D +VY AS
Sbjct: 435 -LGSCRNYNNIRLARIAAEQLFQLEPDNGGNHVLLSNVYAAS 475
>gi|413954823|gb|AFW87472.1| hypothetical protein ZEAMMB73_326917 [Zea mays]
Length = 610
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 211/560 (37%), Positives = 323/560 (57%), Gaps = 47/560 (8%)
Query: 86 EGREIFDEMP----KKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYT 141
EGR++ M + + T ++ Y ++ A + + MPE+N VSWTAM+ GY+
Sbjct: 53 EGRQVHARMVTAGYRPALYLATRLVIMYARCGALEDAHNVLDGMPERNVVSWTAMISGYS 112
Query: 142 QCGRIQDAWELFKAM----------PMKSVVASNSMILGLGQNG---------------- 175
Q R +AW+LF M + SV+ S + G+ Q+
Sbjct: 113 QNERPAEAWDLFIMMLRAGCEPNEFTLASVLTSCTGSQGIHQHQIKQVHAFAIKKNFELH 172
Query: 176 ---------------EVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQK 220
+Q+AR VFD + +D +++ ++ Y R G + E ++LF +
Sbjct: 173 MFVGSSLLDMYARSENIQEARRVFDMLPARDVVSYTTILSGYTRLGLDEEALNLFRQLYN 232
Query: 221 EGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVK 280
EG++ N + +L+ + L+S+D+G+QVH ++R + + + + LI MY KCG+L+
Sbjct: 233 EGMQCNQVTFSVLLNALSGLSSMDYGKQVHGLILRRELPFFMALQNSLIDMYSKCGKLLY 292
Query: 281 GKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSY 340
+ +FDN + +V WN+++ GY ++G+ + +++F M V PD VTL+ VL S+
Sbjct: 293 SRRVFDNMPERSVVSWNAMLMGYGRHGMAYEVVQLFRFM-CDKVKPDSVTLLAVLLGYSH 351
Query: 341 TGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWG 400
G V EG ++F+ + + T+HY C++DLLGR+GQ+E A+ LI+ MPF+P IWG
Sbjct: 352 GGLVDEGLDMFDHIVKEQSTLLNTQHYGCVIDLLGRSGQLEKALLLIQKMPFQPTRAIWG 411
Query: 401 SLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRN 460
SLLGACR H + + E A+KL +EP+NAG Y++LSNIYA+ + DV LRK M K+
Sbjct: 412 SLLGACRVHANVHVGEFVAQKLFDIEPENAGNYVILSNIYAAARMWKDVFRLRKLMLKKT 471
Query: 461 VIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDV 520
VIK PG SW+ ++K +H F + HP I + +I ++ AG+ PD S VLHDV
Sbjct: 472 VIKEPGRSWMILDKVIHTFHSSERF-HPRKEDINVKINEIYAAIKAAGFVPDLSCVLHDV 530
Query: 521 DEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIIL 580
D+E+K L HSEKLA+ +GL+ P + I+VMKNLR+C DCH+ K +SKV GREI L
Sbjct: 531 DDEQKERMLLGHSEKLAITFGLMSTPSDLTIQVMKNLRICVDCHNFAKFVSKVYGREISL 590
Query: 581 RDANRFHHFKDGLCSCRDYW 600
RD NRFH +G C+C DYW
Sbjct: 591 RDKNRFHLITEGACTCGDYW 610
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 129/273 (47%), Gaps = 52/273 (19%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPE-------------------------- 34
MPERNVVSWTAM+ GY + EA LF M
Sbjct: 96 MPERNVVSWTAMISGYSQNERPAEAWDLFIMMLRAGCEPNEFTLASVLTSCTGSQGIHQH 155
Query: 35 --KNVVSWTV-------------MLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYC 79
K V ++ + +L + R I +ARR+FDM+P +DVV+ T ++ GY
Sbjct: 156 QIKQVHAFAIKKNFELHMFVGSSLLDMYARSENIQEARRVFDMLPARDVVSYTTILSGYT 215
Query: 80 QDGRVDEG----REIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTA 135
+ G +E R++++E + N ++++ +++ + +D +++ ++ + + A
Sbjct: 216 RLGLDEEALNLFRQLYNEGMQCNQVTFSVLLNALSGLSSMDYGKQVHGLILRRELPFFMA 275
Query: 136 MLMG----YTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREK- 190
+ Y++CG++ + +F MP +SVV+ N+M++G G++G + +F M +K
Sbjct: 276 LQNSLIDMYSKCGKLLYSRRVFDNMPERSVVSWNAMLMGYGRHGMAYEVVQLFRFMCDKV 335
Query: 191 --DDATWSGMIKVYERKGYELEVIDLFTLMQKE 221
D T ++ Y G E +D+F + KE
Sbjct: 336 KPDSVTLLAVLLGYSHGGLVDEGLDMFDHIVKE 368
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 85/356 (23%), Positives = 162/356 (45%), Gaps = 57/356 (16%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMM------ 63
T +V Y G + +A + MPE+NVVSWT M+ G+ ++ R +A LF MM
Sbjct: 74 TRLVIMYARCGALEDAHNVLDGMPERNVVSWTAMISGYSQNERPAEAWDLFIMMLRAGCE 133
Query: 64 PEKDVVA-----------------------------QTNMVLG------YCQDGRVDEGR 88
P + +A + +M +G Y + + E R
Sbjct: 134 PNEFTLASVLTSCTGSQGIHQHQIKQVHAFAIKKNFELHMFVGSSLLDMYARSENIQEAR 193
Query: 89 EIFDEMPKKNVISWTTMISGY----VNNNRIDVARKLFEVMPEKNEVSWTAML-----MG 139
+FD +P ++V+S+TT++SGY ++ +++ R+L+ + N+V+++ +L +
Sbjct: 194 RVFDMLPARDVVSYTTILSGYTRLGLDEEALNLFRQLYNEGMQCNQVTFSVLLNALSGLS 253
Query: 140 YTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMI 199
G+ L + +P + NS+I + G++ +R VFD M E+ +W+ M+
Sbjct: 254 SMDYGKQVHGLILRRELPF-FMALQNSLIDMYSKCGKLLYSRRVFDNMPERSVVSWNAML 312
Query: 200 KVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFD 259
Y R G EV+ LF M + V+ + +L++VL + +D G + +V+ Q
Sbjct: 313 MGYGRHGMAYEVVQLFRFMCDK-VKPDSVTLLAVLLGYSHGGLVDEGLDMFDHIVKEQST 371
Query: 260 -VDVYVASVLITMYIKCGELVKGKLIFDNFASKDI-VMWNSIISG---YAQYGLGE 310
++ +I + + G+L K L+ + +W S++ +A +GE
Sbjct: 372 LLNTQHYGCVIDLLGRSGQLEKALLLIQKMPFQPTRAIWGSLLGACRVHANVHVGE 427
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 114/216 (52%), Gaps = 17/216 (7%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEK----NVVSWTVMLGGFIRDSRIDDA 56
+P R+VVS+T ++ GY G+ EA LF Q+ + N V+++V+L S +D
Sbjct: 199 LPARDVVSYTTILSGYTRLGLDEEALNLFRQLYNEGMQCNQVTFSVLLNALSGLSSMDYG 258
Query: 57 RRLFDMMPEKDV----VAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+++ ++ +++ Q +++ Y + G++ R +FD MP+++V+SW M+ GY +
Sbjct: 259 KQVHGLILRRELPFFMALQNSLIDMYSKCGKLLYSRRVFDNMPERSVVSWNAMLMGYGRH 318
Query: 113 NRIDVARKLFEVMPEK---NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMIL 169
+LF M +K + V+ A+L+GY+ G + + ++F + + N+
Sbjct: 319 GMAYEVVQLFRFMCDKVKPDSVTLLAVLLGYSHGGLVDEGLDMFDHIVKEQSTLLNTQHY 378
Query: 170 G-----LGQNGEVQKARVVFDQMR-EKDDATWSGMI 199
G LG++G+++KA ++ +M + A W ++
Sbjct: 379 GCVIDLLGRSGQLEKALLLIQKMPFQPTRAIWGSLL 414
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 101/200 (50%), Gaps = 5/200 (2%)
Query: 227 FPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFD 286
F + ++ C +L GRQVHA++V + +Y+A+ L+ MY +CG L + D
Sbjct: 35 FHDYDAAITECVGRRALREGRQVHARMVTAGYRPALYLATRLVIMYARCGALEDAHNVLD 94
Query: 287 NFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKE 346
+++V W ++ISGY+Q ++ +F M +G P++ TL VL++C+ + + +
Sbjct: 95 GMPERNVVSWTAMISGYSQNERPAEAWDLFIMMLRAGCEPNEFTLASVLTSCTGSQGIHQ 154
Query: 347 GR-EIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
+ + + K E + ++D+ R+ +++A ++ + +P D + + ++L
Sbjct: 155 HQIKQVHAFAIKKNFELHMFVGSSLLDMYARSENIQEARRVFDMLPAR-DVVSYTTILSG 213
Query: 406 CRTHMKLDLAEVAAKKLLQL 425
+ +L L E A QL
Sbjct: 214 ---YTRLGLDEEALNLFRQL 230
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 87/177 (49%), Gaps = 18/177 (10%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEK---NVVSWTVMLGGFIRDSRIDDAR 57
MPER+VVSW AM+ GY GM E LF M +K + V+ +L G+ +D+
Sbjct: 300 MPERSVVSWNAMLMGYGRHGMAYEVVQLFRFMCDKVKPDSVTLLAVLLGYSHGGLVDEGL 359
Query: 58 RLFD-MMPEKDVVAQTNM------VLGYCQDGRVDEGREIFDEMPKKNVIS-WTTMISGY 109
+FD ++ E+ + T +LG + G++++ + +MP + + W +++
Sbjct: 360 DMFDHIVKEQSTLLNTQHYGCVIDLLG--RSGQLEKALLLIQKMPFQPTRAIWGSLLGAC 417
Query: 110 VNNNRID----VARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVV 162
+ + VA+KLF++ PE N ++ + Y +D + L K M K+V+
Sbjct: 418 RVHANVHVGEFVAQKLFDIEPE-NAGNYVILSNIYAAARMWKDVFRLRKLMLKKTVI 473
>gi|222616932|gb|EEE53064.1| hypothetical protein OsJ_35805 [Oryza sativa Japonica Group]
Length = 841
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 190/475 (40%), Positives = 298/475 (62%), Gaps = 5/475 (1%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
+P NV+SW +V GY + G + EA LF +MPE+NVV+W V+L G+++ S+++ A LF
Sbjct: 224 IPSPNVISWVNLVNGYCQAGRMGEARELFDRMPERNVVAWNVLLSGYVQFSQVEAAYNLF 283
Query: 61 DMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARK 120
MPEK+ ++ T MV G+ + G++ E +++ +MP NV + T ++ GY+ +N ID AR+
Sbjct: 284 IEMPEKNSISWTTMVSGFVRSGKLQEAKDVLSKMPSDNVGAKTALMHGYLKSNLIDDARQ 343
Query: 121 LFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKA 180
LF+ + ++ V W M+ GY QCG + +A LF+ MP K +++ N+MI G Q G+++KA
Sbjct: 344 LFDGIVVRDAVCWNTMISGYVQCGMLDEAMVLFQQMPNKDMISWNTMIAGCAQGGQIRKA 403
Query: 181 RVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASL 240
+F +M+ ++ +W+ +I + + G +E + F LM+++ ++ + LS A+L
Sbjct: 404 ASIFRKMKRRNTVSWNSIISGFVQNGLFVEALQHFMLMRRDAKSADWCTYACCLSASANL 463
Query: 241 ASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSII 300
A+L GRQ H+ LVR F D + LI+ Y KCG +++ + +FD +DIV WN++I
Sbjct: 464 ATLQIGRQFHSLLVRTGFISDSSPGNALISAYAKCGRMLEARQVFDEMVVQDIVSWNALI 523
Query: 301 SGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLV 360
GYA G G + + VF EM ++ V PD++TLV VLSACS+ G + EG F SM Y +
Sbjct: 524 DGYASNGNGSEVIAVFREMEANSVRPDEITLVVVLSACSHAGLIDEGLHFFNSMIKLYSL 583
Query: 361 EPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAK 420
+P EHY CMVDLLGRAG++ +A +L++ M +P+A +WG+LLGACR H ++A +AA+
Sbjct: 584 KPVAEHYTCMVDLLGRAGRLREAFELVQGMQIQPNAGVWGALLGACRVHKNHEIAWLAAE 643
Query: 421 KLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKK 475
KL +LEP A Y+LLSNI G++ D + KP C W E+K
Sbjct: 644 KLFELEPCKASNYVLLSNICVEAGKWDDADKCYG-----ASWKPRHCLWKWQEQK 693
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 139/522 (26%), Positives = 245/522 (46%), Gaps = 81/522 (15%)
Query: 17 VEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVL 76
G + A LF +MP +NVVS+ M+ R+ +ARRLFD MP ++ V+ M++
Sbjct: 22 ARSGQLAAARRLFEEMPRRNVVSYNAMVSALAHHGRLAEARRLFDEMPRRNPVSWNTMMV 81
Query: 77 GYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMP-EKNEVSWTA 135
Q GRV++ R +FD MP +N SWT M+S YV + +AR+L + MP EK +
Sbjct: 82 ACSQHGRVEDARGLFDAMPARNEYSWTIMVSCYVRAGELTLARELLDRMPGEKCAACYNT 141
Query: 136 MLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATW 195
M+ GY + GR +DA L + MP +V+ NS++ GL +N E+ ++ FD+M +KD +W
Sbjct: 142 MISGYAKNGRFEDAIALLQEMPAPDIVSWNSVLGGLIRNEEISRSVQFFDEMPDKDLVSW 201
Query: 196 SGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVR 255
+ M++ Y R G +L+V F R+ P++IS ++
Sbjct: 202 NLMLEGYVRAG-DLDVASAFF------SRIPSPNVISWVN-------------------- 234
Query: 256 CQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKV 315
L+ Y + G + + + +FD +++V WN ++SGY Q+ E + +
Sbjct: 235 ------------LVNGYCQAGRMGEARELFDRMPERNVVAWNVLLSGYVQFSQVEAAYNL 282
Query: 316 FHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLG 375
F EM + ++ ++S +GK++E +++ M S V KT A M L
Sbjct: 283 FIEMPEK----NSISWTTMVSGFVRSGKLQEAKDVLSKMPSDN-VGAKT---ALMHGYL- 333
Query: 376 RAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYIL 435
++ ++DA +L + + DA+ W +++ +++ + + A Q+ K+ +
Sbjct: 334 KSNLIDDARQLFDGIVVR-DAVCWNTMISG---YVQCGMLDEAMVLFQQMPNKDMISWNT 389
Query: 436 LSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSW-----------IEVEKKVH-MFTGRD 483
+ A G+ A + + M++RN + SW + VE H M RD
Sbjct: 390 MIAGCAQGGQIRKAASIFRKMKRRNTV-----SWNSIISGFVQNGLFVEALQHFMLMRRD 444
Query: 484 -----------CVSHPEHPMIMRMLEKIGGLLREAGYCPDSS 514
C+S + +++ + LL G+ DSS
Sbjct: 445 AKSADWCTYACCLSASANLATLQIGRQFHSLLVRTGFISDSS 486
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 148/559 (26%), Positives = 251/559 (44%), Gaps = 72/559 (12%)
Query: 1 MP-ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRL 59
MP E+ + M+ GY + G +A L +MP ++VSW +LGG IR+ I + +
Sbjct: 130 MPGEKCAACYNTMISGYAKNGRFEDAIALLQEMPAPDIVSWNSVLGGLIRNEEISRSVQF 189
Query: 60 FDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVAR 119
FD MP+KD+V+ M+ GY + G +D F +P NVISW +++GY R+ AR
Sbjct: 190 FDEMPDKDLVSWNLMLEGYVRAGDLDVASAFFSRIPSPNVISWVNLVNGYCQAGRMGEAR 249
Query: 120 KLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQK 179
+LF+ MPE+N V+W +L GY Q +++ A+ LF MP K+ ++ +M+ G ++G++Q+
Sbjct: 250 ELFDRMPERNVVAWNVLLSGYVQFSQVEAAYNLFIEMPEKNSISWTTMVSGFVRSGKLQE 309
Query: 180 ARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFT-LMQKEGVRVNFPSLISVLSVCA 238
A+ V +M + + ++ Y + + LF ++ ++ V N ++IS C
Sbjct: 310 AKDVLSKMPSDNVGAKTALMHGYLKSNLIDDARQLFDGIVVRDAVCWN--TMISGYVQC- 366
Query: 239 SLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNS 298
LD + Q+ + D+ + +I + G++ K IF ++ V WNS
Sbjct: 367 --GMLDEAMVLFQQMP----NKDMISWNTMIAGCAQGGQIRKAASIFRKMKRRNTVSWNS 420
Query: 299 IISGYAQYGLGEKSL----------------------------------KVFHEMF-SSG 323
IISG+ Q GL ++L + FH + +G
Sbjct: 421 IISGFVQNGLFVEALQHFMLMRRDAKSADWCTYACCLSASANLATLQIGRQFHSLLVRTG 480
Query: 324 VMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKT--EHYACMVDLLGRAGQVE 381
+ D ++SA + G++ E R++F+ M + +V + YA G +V
Sbjct: 481 FISDSSPGNALISAYAKCGRMLEARQVFDEMVVQDIVSWNALIDGYASN----GNGSEVI 536
Query: 382 DAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAE---VAAKKLLQLEPKNAGPYILLSN 438
+ +EA PD I +L AC +D + KL L+P A Y + +
Sbjct: 537 AVFREMEANSVRPDEITLVVVLSACSHAGLIDEGLHFFNSMIKLYSLKPV-AEHYTCMVD 595
Query: 439 IYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLE 498
+ GR + EL + M+ I+P W + C H H + E
Sbjct: 596 LLGRAGRLREAFELVQGMQ----IQPNAGVWGALLGA--------CRVHKNHEIAWLAAE 643
Query: 499 KIGGLLREAGYCPDSSFVL 517
K L E C S++VL
Sbjct: 644 K----LFELEPCKASNYVL 658
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 102/361 (28%), Positives = 188/361 (52%), Gaps = 13/361 (3%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MP RN VSW M+ + G + +A LF MP +N SWT+M+ ++R + AR L
Sbjct: 68 MPRRNPVSWNTMMVACSQHGRVEDARGLFDAMPARNEYSWTIMVSCYVRAGELTLARELL 127
Query: 61 DMMP-EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVAR 119
D MP EK M+ GY ++GR ++ + EMP +++SW +++ G + N I +
Sbjct: 128 DRMPGEKCAACYNTMISGYAKNGRFEDAIALLQEMPAPDIVSWNSVLGGLIRNEEISRSV 187
Query: 120 KLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQK 179
+ F+ MP+K+ VSW ML GY + G + A F +P +V++ +++ G Q G + +
Sbjct: 188 QFFDEMPDKDLVSWNLMLEGYVRAGDLDVASAFFSRIPSPNVISWVNLVNGYCQAGRMGE 247
Query: 180 ARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCAS 239
AR +FD+M E++ W+ ++ Y + +LF M ++ N S +++S
Sbjct: 248 ARELFDRMPERNVVAWNVLLSGYVQFSQVEAAYNLFIEMPEK----NSISWTTMVSGFVR 303
Query: 240 LASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSI 299
L + V +++ +V + L+ Y+K + + +FD +D V WN++
Sbjct: 304 SGKLQEAKDVLSKMP----SDNVGAKTALMHGYLKSNLIDDARQLFDGIVVRDAVCWNTM 359
Query: 300 ISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYL 359
ISGY Q G+ ++++ +F +M + D ++ +++ C+ G++++ IF MK +
Sbjct: 360 ISGYVQCGMLDEAMVLFQQMPNK----DMISWNTMIAGCAQGGQIRKAASIFRKMKRRNT 415
Query: 360 V 360
V
Sbjct: 416 V 416
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/358 (25%), Positives = 165/358 (46%), Gaps = 22/358 (6%)
Query: 106 ISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASN 165
++ + ++ AR+LFE MP +N VS+ AM+ GR+ +A LF MP ++ V+ N
Sbjct: 18 LTSLARSGQLAAARRLFEEMPRRNVVSYNAMVSALAHHGRLAEARRLFDEMPRRNPVSWN 77
Query: 166 SMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRV 225
+M++ Q+G V+ AR +FD M +++ +W+ M+ Y R G +L M E
Sbjct: 78 TMMVACSQHGRVEDARGLFDAMPARNEYSWTIMVSCYVRAGELTLARELLDRMPGEKCAA 137
Query: 226 NFPSLISVLSVCASLASLDHGRQVHA-QLVRCQFDVDVYVASVLITMYIKCGELVKGKLI 284
+ ++IS + +GR A L++ D+ + ++ I+ E+ +
Sbjct: 138 CYNTMISGYA--------KNGRFEDAIALLQEMPAPDIVSWNSVLGGLIRNEEISRSVQF 189
Query: 285 FDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKV 344
FD KD+V WN ++ GY + G L V FS P+ ++ V +++ G++
Sbjct: 190 FDEMPDKDLVSWNLMLEGYVRAG----DLDVASAFFSRIPSPNVISWVNLVNGYCQAGRM 245
Query: 345 KEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLG 404
E RE+F+ M + +V + ++ + QVE A L MP E ++I W +++
Sbjct: 246 GEARELFDRMPERNVVA-----WNVLLSGYVQFSQVEAAYNLFIEMP-EKNSISWTTMVS 299
Query: 405 ACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVI 462
KL + A L ++ N G L + Y D +L + R+ +
Sbjct: 300 GFVRSGKL---QEAKDVLSKMPSDNVGAKTALMHGYLKSNLIDDARQLFDGIVVRDAV 354
>gi|147838932|emb|CAN63659.1| hypothetical protein VITISV_008415 [Vitis vinifera]
Length = 760
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 209/553 (37%), Positives = 320/553 (57%), Gaps = 48/553 (8%)
Query: 47 FIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMP----KKNVISW 102
+I+ ++I DA R+FD M E DVV+ + +V Y + G VDE + +F EM + N+ISW
Sbjct: 159 YIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEMGDSGVQPNLISW 218
Query: 103 TTMISGYVNNNRIDVARKLFEVM------PEKNEVSW----------------------- 133
MI+G+ ++ A +F M P+ +S
Sbjct: 219 NGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDLEDLVMGILIHGYVIK 278
Query: 134 ----------TAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVV 183
+A++ Y +C + ++F M V + N+ I GL +NG+V+ + +
Sbjct: 279 QGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFGLSRNGQVESSLRL 338
Query: 184 FDQMREK----DDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCAS 239
F Q++++ + +W+ MI + G ++E ++LF MQ GV+ N ++ +L C +
Sbjct: 339 FRQLKDQGMELNVVSWTSMIACCSQNGRDMEALELFREMQIAGVKPNSVTIPCLLPACGN 398
Query: 240 LASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSI 299
+A+L HG+ H +R DVYV S LI MY KCG + ++ FD +K++V WN++
Sbjct: 399 IAALMHGKAAHCFSLRRGISTDVYVGSALIDMYAKCGRIQASRICFDGIPTKNLVCWNAV 458
Query: 300 ISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYL 359
I+GYA +G ++++++F M SG PD ++ VLSACS +G +EG F SM SKY
Sbjct: 459 IAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTCVLSACSQSGLTEEGSYYFNSMSSKYG 518
Query: 360 VEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAA 419
+E + EHYACMV LL RAG++E A +I MP PDA +WG+LL +CR H + L EVAA
Sbjct: 519 IEARVEHYACMVTLLSRAGKLEQAYAMIRRMPVNPDACVWGALLSSCRVHNNVSLGEVAA 578
Query: 420 KKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMF 479
+KL +LEP N G YILLSNIYAS+G +++V +R M+ + + K PGCSWIEV+ KVHM
Sbjct: 579 EKLFELEPSNPGNYILLSNIYASKGMWNEVNRVRDMMKNKGLRKNPGCSWIEVKNKVHML 638
Query: 480 TGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVA 539
D SHP+ I+ L+K+ +++ GY P+ +FVL DV+E++K L HSEKLAV
Sbjct: 639 LAGD-KSHPQMTQIIENLDKLSMEMKKLGYFPEINFVLQDVEEQDKEQILCGHSEKLAVV 697
Query: 540 YGLVKLPEGVPIR 552
+GL+ P G P++
Sbjct: 698 FGLLNTPPGYPLQ 710
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 92/175 (52%)
Query: 180 ARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCAS 239
A +V D + E + ++S +I + + + F+ M G+ + L S + CA
Sbjct: 67 ATLVLDLVPEPNVFSFSTLIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAG 126
Query: 240 LASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSI 299
L++L RQVH FD D +V S L+ MYIKC ++ +FD D+V W+++
Sbjct: 127 LSALKPARQVHGIASVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSAL 186
Query: 300 ISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESM 354
++ YA+ G +++ ++F EM SGV P+ ++ G+++ +++G E +F M
Sbjct: 187 VAAYARQGCVDEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDM 241
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 84/168 (50%), Gaps = 2/168 (1%)
Query: 238 ASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWN 297
++ ASL RQ HA +++ D ++A+ L++ Y L+ D ++ ++
Sbjct: 24 STTASLSQTRQAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLDLVPEPNVFSFS 83
Query: 298 SIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSK 357
++I ++++ +L F +M + G+MPD+ L + AC+ +K R++ + S
Sbjct: 84 TLIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQV-HGIASV 142
Query: 358 YLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
+ + + +V + + Q+ DA ++ + M FEPD + W +L+ A
Sbjct: 143 SGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRM-FEPDVVSWSALVAA 189
>gi|302786876|ref|XP_002975209.1| hypothetical protein SELMODRAFT_102435 [Selaginella moellendorffii]
gi|300157368|gb|EFJ23994.1| hypothetical protein SELMODRAFT_102435 [Selaginella moellendorffii]
Length = 805
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 232/642 (36%), Positives = 339/642 (52%), Gaps = 54/642 (8%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEK-NVVSWTVMLGGFIRDSRIDDARRLFDMMPE--- 65
+A+V Y G + +A LF + +VV W M+ ++ +A +F M +
Sbjct: 167 SALVSMYGRCGSLRDANALFGHLERHLDVVLWNAMITANSQNGSPREALEIFYRMLQLGI 226
Query: 66 -KDVVAQTNMVLGYCQDG------RVDEGREIFDEMP-KKNVISWTTMISGYVNNNRIDV 117
D+V + V C +V DE +V+ T +++ Y ID
Sbjct: 227 PPDLVTFVS-VFKACSSSPSLRASQVKGFHTCLDETGLGSDVVVATALVNAYARCGEIDC 285
Query: 118 ARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGE- 176
AR+ F MPE+N VSWT+M+ + Q G + A E F AM ++ VV + S + + E
Sbjct: 286 AREFFAAMPERNAVSWTSMIAAFAQIGHLL-AVETFHAMLLEGVVPTRSTLFAALEGCED 344
Query: 177 VQKARVVF-----------------------------DQMR--------EKDDATWSGMI 199
+ AR+V D +R E D A + MI
Sbjct: 345 LHTARLVEAIAQEIGVATDVAIVTDLVMAYARCDGQEDAIRVFSAREEGEWDAALVTAMI 404
Query: 200 KVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVR-CQF 258
VY + L+ + G+ + I+ L CASLA+L GRQ+HA + +
Sbjct: 405 AVYAQCRDRRSTFKLWGAAIERGISPDRILYITALDACASLAALSEGRQIHACVAADRRL 464
Query: 259 DVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHE 318
D DV + + +++MY +CG L + FD ++D + WN+++S AQ+G E +F
Sbjct: 465 DRDVTLGNAIVSMYGQCGSLRDARDAFDGMPARDEISWNAMLSASAQHGRVEDCCDLFRA 524
Query: 319 MFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAG 378
M G + V + +LSAC++ G V+ G E F +M + V P TEHY CMVDLLGR G
Sbjct: 525 MLQEGFDAERVAFLNLLSACAHAGLVEAGCEHFSAMTGDHGVVPATEHYGCMVDLLGRKG 584
Query: 379 QVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSN 438
++ DA +++AMP PDA W +L+GACR + + AA+++L+L + Y+ L N
Sbjct: 585 RLADAHGIVQAMPVPPDAATWMALMGACRIYGDTERGRFAAERVLELRANHTAAYVALCN 644
Query: 439 IYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLE 498
IY++ GR+ D A +RK M + K PG S IE+ KVH F RD SHP+ I LE
Sbjct: 645 IYSAAGRWEDAAAVRKIMADLGLRKIPGVSSIEIRSKVHEFVVRD-RSHPQSEAIYAELE 703
Query: 499 KIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLR 558
++ G + AGY + VLHDV+EE+K LR+HSEKLA+A+G++ P+G +RV+KNLR
Sbjct: 704 RVMGAIERAGYRAVTGEVLHDVEEEQKEQLLRFHSEKLAIAFGMMSTPQGSTLRVIKNLR 763
Query: 559 VCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
VC DCH+A K ISKV GREI++RD RFHHFKDG CSC DYW
Sbjct: 764 VCVDCHNASKFISKVFGREIVVRDVRRFHHFKDGACSCGDYW 805
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 126/244 (51%), Gaps = 3/244 (1%)
Query: 164 SNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGV 223
++S++ + G ++ A VF ++ K W+ +I Y +G+ I LF + +EG+
Sbjct: 65 ASSLVYMYLRCGSLESAIDVFHKIAHKSIVLWTVLISAYVSRGHSAAAIALFHRILQEGI 124
Query: 224 RVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKL 283
++ +SVLS C+S L GR +H V + VAS L++MY +CG L
Sbjct: 125 ALDAIVFVSVLSACSSEEFLAAGRLIHRCAVEAGLGLQEIVASALVSMYGRCGSLRDANA 184
Query: 284 IFDNFASK-DIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTG 342
+F + D+V+WN++I+ +Q G ++L++F+ M G+ PD VT V V ACS +
Sbjct: 185 LFGHLERHLDVVLWNAMITANSQNGSPREALEIFYRMLQLGIPPDLVTFVSVFKACSSSP 244
Query: 343 KVKEGR-EIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGS 401
++ + + F + + + +V+ R G+++ A + AMP E +A+ W S
Sbjct: 245 SLRASQVKGFHTCLDETGLGSDVVVATALVNAYARCGEIDCAREFFAAMP-ERNAVSWTS 303
Query: 402 LLGA 405
++ A
Sbjct: 304 MIAA 307
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 140/296 (47%), Gaps = 16/296 (5%)
Query: 66 KDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVM 125
+D +++V Y + G ++ ++F ++ K+++ WT +IS YV+ A LF +
Sbjct: 60 RDGYLASSLVYMYLRCGSLESAIDVFHKIAHKSIVLWTVLISAYVSRGHSAAAIALFHRI 119
Query: 126 PEK----NEVSWTAMLMG-----YTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGE 176
++ + + + ++L + GR+ + + ++ +VAS +++ G+ G
Sbjct: 120 LQEGIALDAIVFVSVLSACSSEEFLAAGRLIHRCAVEAGLGLQEIVAS-ALVSMYGRCGS 178
Query: 177 VQKARVVFDQM-REKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLS 235
++ A +F + R D W+ MI + G E +++F M + G+ + + +SV
Sbjct: 179 LRDANALFGHLERHLDVVLWNAMITANSQNGSPREALEIFYRMLQLGIPPDLVTFVSVFK 238
Query: 236 VCASLASL--DHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDI 293
C+S SL + H L DV VA+ L+ Y +CGE+ + F ++
Sbjct: 239 ACSSSPSLRASQVKGFHTCLDETGLGSDVVVATALVNAYARCGEIDCAREFFAAMPERNA 298
Query: 294 VMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACS--YTGKVKEG 347
V W S+I+ +AQ G +++ FH M GV+P TL L C +T ++ E
Sbjct: 299 VSWTSMIAAFAQIG-HLLAVETFHAMLLEGVVPTRSTLFAALEGCEDLHTARLVEA 353
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 70/145 (48%), Gaps = 1/145 (0%)
Query: 261 DVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMF 320
D Y+AS L+ MY++CG L +F A K IV+W +IS Y G ++ +FH +
Sbjct: 61 DGYLASSLVYMYLRCGSLESAIDVFHKIAHKSIVLWTVLISAYVSRGHSAAAIALFHRIL 120
Query: 321 SSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQV 380
G+ D + V VLSACS + GR I L + A +V + GR G +
Sbjct: 121 QEGIALDAIVFVSVLSACSSEEFLAAGRLIHRCAVEAGLGLQEIVASA-LVSMYGRCGSL 179
Query: 381 EDAMKLIEAMPFEPDAIIWGSLLGA 405
DA L + D ++W +++ A
Sbjct: 180 RDANALFGHLERHLDVVLWNAMITA 204
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 74/333 (22%), Positives = 119/333 (35%), Gaps = 89/333 (26%)
Query: 1 MPERNVVSWTAMVRGYVE---------------EGMITEAGTLFWQMP------------ 33
MPERN VSWT+M+ + + EG++ TLF +
Sbjct: 293 MPERNAVSWTSMIAAFAQIGHLLAVETFHAMLLEGVVPTRSTLFAALEGCEDLHTARLVE 352
Query: 34 --------EKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEK--DVVAQTNMVLGY--CQD 81
+V T ++ + R +DA R+F E D T M+ Y C+D
Sbjct: 353 AIAQEIGVATDVAIVTDLVMAYARCDGQEDAIRVFSAREEGEWDAALVTAMIAVYAQCRD 412
Query: 82 GR---------------------------------VDEGREIF-----DEMPKKNVISWT 103
R + EGR+I D ++V
Sbjct: 413 RRSTFKLWGAAIERGISPDRILYITALDACASLAALSEGRQIHACVAADRRLDRDVTLGN 472
Query: 104 TMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVA 163
++S Y + AR F+ MP ++E+SW AML Q GR++D +LF+AM + A
Sbjct: 473 AIVSMYGQCGSLRDARDAFDGMPARDEISWNAMLSASAQHGRVEDCCDLFRAMLQEGFDA 532
Query: 164 SNSMILGL----GQNGEVQKARVVFDQMREKDDAT-----WSGMIKVYERKGYELEVIDL 214
L L G V+ F M + M+ + RKG + D
Sbjct: 533 ERVAFLNLLSACAHAGLVEAGCEHFSAMTGDHGVVPATEHYGCMVDLLGRKG---RLADA 589
Query: 215 FTLMQKEGVRVNFPSLISVLSVCASLASLDHGR 247
++Q V + + ++++ C + GR
Sbjct: 590 HGIVQAMPVPPDAATWMALMGACRIYGDTERGR 622
>gi|297744558|emb|CBI37820.3| unnamed protein product [Vitis vinifera]
Length = 504
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 194/490 (39%), Positives = 307/490 (62%), Gaps = 20/490 (4%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
M ERNVVSW AMV G+++ G + A F +MPE++ S + ++ G I++ +D+A+R+
Sbjct: 11 MQERNVVSWNAMVTGFLQNGDVERAIEFFMRMPERDSASLSALVAGLIQNGELDEAKRIL 70
Query: 61 DMMPEKD-----VVAQTNMVL-GYCQDGRVDEGREIFDEMP------------KKNVISW 102
+D +V N++L GY Q+GRVD+ R++FD++P ++NV+SW
Sbjct: 71 LTSRRQDDDKGDLVHAYNILLAGYGQNGRVDKARQLFDQIPFYDGGQKDGGRFERNVVSW 130
Query: 103 TTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVV 162
+MI YV I AR LF+ M E++ +SW M+ GY + +++AW LF+ MP +
Sbjct: 131 NSMIMCYVKARDIFSARVLFDQMKERDTISWNTMISGYVRMSDMEEAWMLFQEMPNPDTL 190
Query: 163 ASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEG 222
NSMI G Q G ++ AR +F + +K+ +W+ MI YE G +L+ M +G
Sbjct: 191 TWNSMISGFAQKGNLELARALFATIPQKNLVSWNSMIAGYENNGDYKGATELYRQMLLQG 250
Query: 223 VRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGK 282
+ + +L SVLSVC+ A+L G Q+H Q+ + D+ + + LITMY +CG +V+ +
Sbjct: 251 EKPDRHTLSSVLSVCSGFAALHLGMQIHQQITKTVIP-DIPINNSLITMYSRCGAIVEAR 309
Query: 283 LIFDNFA-SKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYT 341
IFD K+++ WN++I GYA +G +L++F M V P +T + VL+AC++
Sbjct: 310 TIFDEVKLQKEVISWNAMIGGYAFHGFAADALELFELMKRLKVRPTYITFISVLNACAHA 369
Query: 342 GKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGS 401
G VKEGR F+SM ++ +EP+ EH+A +VD++GR GQ+E+AM LI +MPFEPD +WG+
Sbjct: 370 GFVKEGRMHFKSMACEFGIEPRIEHFASLVDIVGRHGQLEEAMDLINSMPFEPDKAVWGA 429
Query: 402 LLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNV 461
LLGACR H ++LA VAA+ L++LEP+++ PY+LL N+YA G++ + E+R M + N+
Sbjct: 430 LLGACRVHNNVELARVAAEALMKLEPESSAPYVLLHNMYADVGQWDNATEMRMMMERNNI 489
Query: 462 IKPPGCSWIE 471
K PG SW++
Sbjct: 490 RKQPGYSWVD 499
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 86/344 (25%), Positives = 164/344 (47%), Gaps = 28/344 (8%)
Query: 84 VDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQC 143
+DE ++FD M ++NV+SW M++G++ N ++ A + F MPE++ S +A++ G Q
Sbjct: 1 MDEALQLFDSMQERNVVSWNAMVTGFLQNGDVERAIEFFMRMPERDSASLSALVAGLIQN 60
Query: 144 GRIQDAWELFKAMPMKS------VVASNSMILGLGQNGEVQKARVVFDQMR--------- 188
G + +A + + V A N ++ G GQNG V KAR +FDQ+
Sbjct: 61 GELDEAKRILLTSRRQDDDKGDLVHAYNILLAGYGQNGRVDKARQLFDQIPFYDGGQKDG 120
Query: 189 ---EKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDH 245
E++ +W+ MI Y + LF M KE +++ ++IS ++ ++
Sbjct: 121 GRFERNVVSWNSMIMCYVKARDIFSARVLFDQM-KERDTISWNTMISGY---VRMSDMEE 176
Query: 246 GRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQ 305
+ ++ + D + +I+ + + G L + +F K++V WNS+I+GY
Sbjct: 177 AWMLFQEMP----NPDTLTWNSMISGFAQKGNLELARALFATIPQKNLVSWNSMIAGYEN 232
Query: 306 YGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTE 365
G + + +++ +M G PD TL VLS CS + G +I + + V P
Sbjct: 233 NGDYKGATELYRQMLLQGEKPDRHTLSSVLSVCSGFAALHLGMQIHQQITKT--VIPDIP 290
Query: 366 HYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTH 409
++ + R G + +A + + + + + I W +++G H
Sbjct: 291 INNSLITMYSRCGAIVEARTIFDEVKLQKEVISWNAMIGGYAFH 334
>gi|449475532|ref|XP_004154482.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 642
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 211/601 (35%), Positives = 338/601 (56%), Gaps = 48/601 (7%)
Query: 22 ITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLG--YC 79
I A +F QMPE N W +L R+ ++ + ++ M+ C
Sbjct: 68 IDYARAVFRQMPEPNCFCWNTIL-------------RILAETNDEHLQSEALMLFSAMLC 114
Query: 80 QDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPE----KNEVSWTA 135
DGRV K N ++ +++ +R+ +++ ++ + ++E +
Sbjct: 115 -DGRV-----------KPNRFTFPSVLKACARASRLREGKQIHGLIVKFGFHEDEFVISN 162
Query: 136 MLMGYTQCGRIQDAWELF----------------KAMPMKSVVASNSMILGLGQNGEVQK 179
++ Y C ++DA+ LF K +VV N MI G + G+++
Sbjct: 163 LVRMYVMCAVMEDAYSLFCKNVVDFDGSCQMELDKRKQDGNVVLWNIMIDGQVRLGDIKS 222
Query: 180 ARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCAS 239
A+ +FD+M + +W+ MI Y + G+ +E I+LF MQ + N+ +L+SVL A
Sbjct: 223 AKNLFDEMPPRSVVSWNVMISGYAQNGHFIEAINLFQEMQSSNIDPNYVTLVSVLPAIAR 282
Query: 240 LASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSI 299
+ +L+ G+ +H + + ++D + S L+ MY KCG + K +F+ ++ + W++I
Sbjct: 283 IGALELGKWIHLYAGKNKVEIDDVLGSALVDMYSKCGSIDKALQVFETLPKRNAITWSAI 342
Query: 300 ISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYL 359
I +A +G E ++ FH M +GV P+DV +G+LSACS+ G V+EGR F M
Sbjct: 343 IGAFAMHGRAEDAIIHFHLMGKAGVTPNDVAYIGILSACSHAGLVEEGRSFFSHMVKVVG 402
Query: 360 VEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAA 419
++P+ EHY CMVDLLGRAG +E+A +LI MP EPD +IW +LLGAC+ H L + E A
Sbjct: 403 LQPRIEHYGCMVDLLGRAGHLEEAEELIRNMPIEPDDVIWKALLGACKMHKNLKMGERVA 462
Query: 420 KKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMF 479
+ L++L P ++G Y+ LSN+YAS G + VA +R M+ ++ K PGCSWIE+ +H F
Sbjct: 463 ETLMELAPHDSGSYVALSNLYASLGNWEAVARVRLKMKGMDIRKDPGCSWIEIHGIIHEF 522
Query: 480 TGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVA 539
D SH + I ML ++ LR GY P++ V + DE+E+ +L+YHSEK+AVA
Sbjct: 523 LVED-DSHSKAKEIQAMLGEMSMKLRSNGYRPNTLEVFLNTDEQERARALQYHSEKIAVA 581
Query: 540 YGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDY 599
+GL+ P++++KNLR+C DCH+++KLIS + R+II+RD RFH F+ G CSC DY
Sbjct: 582 FGLISTAPQHPLKIVKNLRICEDCHASLKLISLIYKRQIIVRDRKRFHQFEHGSCSCMDY 641
Query: 600 W 600
W
Sbjct: 642 W 642
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 128/290 (44%), Gaps = 23/290 (7%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMP 64
NVV W M+ G V G I A LF +MP ++VVSW VM+ G+ ++ +A LF M
Sbjct: 203 NVVLWNIMIDGQVRLGDIKSAKNLFDEMPPRSVVSWNVMISGYAQNGHFIEAINLFQEMQ 262
Query: 65 EKDV----VAQTNMVLGYCQDGRVDEGREIFDEMPKKNV----ISWTTMISGYVNNNRID 116
++ V +++ + G ++ G+ I K V + + ++ Y ID
Sbjct: 263 SSNIDPNYVTLVSVLPAIARIGALELGKWIHLYAGKNKVEIDDVLGSALVDMYSKCGSID 322
Query: 117 VARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGL----G 172
A ++FE +P++N ++W+A++ + GR +DA F M V ++ +G+
Sbjct: 323 KALQVFETLPKRNAITWSAIIGAFAMHGRAEDAIIHFHLMGKAGVTPNDVAYIGILSACS 382
Query: 173 QNGEVQKARVVFDQM-----REKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNF 227
G V++ R F M + + M+ + R G+ E +L M E V +
Sbjct: 383 HAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGRAGHLEEAEELIRNMPIEPDDVIW 442
Query: 228 PSLISVLSVCASLASLDHGRQVHAQLVR-CQFDVDVYVASVLITMYIKCG 276
+L L C +L G +V L+ D YVA L +Y G
Sbjct: 443 KAL---LGACKMHKNLKMGERVAETLMELAPHDSGSYVA--LSNLYASLG 487
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 100/217 (46%), Gaps = 18/217 (8%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV----VSWTVMLGGFIRDSRIDDA 56
MP R+VVSW M+ GY + G EA LF +M N+ V+ +L R ++
Sbjct: 230 MPPRSVVSWNVMISGYAQNGHFIEAINLFQEMQSSNIDPNYVTLVSVLPAIARIGALELG 289
Query: 57 RRLF----DMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+ + E D V + +V Y + G +D+ ++F+ +PK+N I+W+ +I + +
Sbjct: 290 KWIHLYAGKNKVEIDDVLGSALVDMYSKCGSIDKALQVFETLPKRNAITWSAIIGAFAMH 349
Query: 113 NRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAMP-----MKSVVA 163
R + A F +M + N+V++ +L + G +++ F M +
Sbjct: 350 GRAEDAIIHFHLMGKAGVTPNDVAYIGILSACSHAGLVEEGRSFFSHMVKVVGLQPRIEH 409
Query: 164 SNSMILGLGQNGEVQKARVVFDQMR-EKDDATWSGMI 199
M+ LG+ G +++A + M E DD W ++
Sbjct: 410 YGCMVDLLGRAGHLEEAEELIRNMPIEPDDVIWKALL 446
>gi|12039323|gb|AAG46111.1|AC073166_9 hypothetical protein [Oryza sativa Japonica Group]
Length = 787
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 210/600 (35%), Positives = 339/600 (56%), Gaps = 17/600 (2%)
Query: 16 YVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDAR-------RLFDMMPEKDV 68
+ G A +F +P T +R+ D R R FD + DV
Sbjct: 84 HSRRGSPASALRVFRALPPAARPDSTTFTLALSACARLGDLRGGESVRDRAFDAGYKDDV 143
Query: 69 VAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNR----IDVARKLFEV 124
++++ Y + G + + ++F MP+++ ++W+TM++G+V+ + I + R++ E
Sbjct: 144 FVCSSLLHLYARWGAMGDAVKVFVRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMRED 203
Query: 125 MPEKNEVSWTAMLMGYTQCGRIQDA----WELFKAMPMKSVVASNSMILGLGQNGEVQKA 180
+ +EV ++ T ++ L + VV + S++ +NG + A
Sbjct: 204 GVKGDEVVMIGVIQACTAARNVRMGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDVA 263
Query: 181 RVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASL 240
VF M ++D +WS MI + + G E + LF MQ G++ + +L+S L C+++
Sbjct: 264 CRVFGLMVHRNDVSWSAMISGFAQNGQSDEALRLFRNMQASGIQPDSGALVSALLACSNI 323
Query: 241 ASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSII 300
L GR VH +VR +FD + + + I MY KCG L +++F+ + +D+++WN++I
Sbjct: 324 GFLKLGRSVHGFIVR-RFDFNCILGTAAIDMYSKCGSLASAQMLFNMISDRDLILWNAMI 382
Query: 301 SGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLV 360
+ +G G+ +L +F EM +G+ PD T +LSA S++G V+EG+ F M + + +
Sbjct: 383 ACCGAHGRGQDALTLFQEMNETGMRPDHATFASLLSALSHSGLVEEGKLWFGRMVNHFKI 442
Query: 361 EPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAK 420
P +HY C+VDLL R+G VE+A L+ +M EP IW +LL C + KL+L E A
Sbjct: 443 TPAEKHYVCLVDLLARSGLVEEASDLLTSMKAEPTVAIWVALLSGCLNNKKLELGESIAD 502
Query: 421 KLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFT 480
+L+L+P + G L+SN+YA+ ++ V ++RK M+ K PGCS IE+ H+F
Sbjct: 503 NILELQPDDVGVLALVSNLYAATKKWDKVRQVRKLMKDSGSKKMPGCSSIEIRGTRHVFV 562
Query: 481 GRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAY 540
D SHP+ I+ + K+ +R+ GY P + FV HD++EE K L YHSE+LA+A+
Sbjct: 563 MED-QSHPQREEIVSKVAKLDLEMRKMGYIPRTEFVYHDLEEEVKEQQLSYHSERLAIAF 621
Query: 541 GLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
GL+ G + ++KNLRVCGDCH AIK ISK+ REI++RDA RFHHFKDG+CSCRDYW
Sbjct: 622 GLLNTGPGTRLVIIKNLRVCGDCHDAIKYISKIADREIVVRDAKRFHHFKDGVCSCRDYW 681
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 90/388 (23%), Positives = 182/388 (46%), Gaps = 39/388 (10%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFI------RDSRID 54
MP R+ V+W+ MV G+V G +A ++ +M E V V++ G I R+ R+
Sbjct: 169 MPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMREDGVKGDEVVMIGVIQACTAARNVRMG 228
Query: 55 DA--RRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+ L DVV T++V Y ++G +D +F M +N +SW+ MISG+ N
Sbjct: 229 ASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDVACRVFGLMVHRNDVSWSAMISGFAQN 288
Query: 113 NRIDVARKLFEVM------PEKNEVSWTAML----MGYTQCGRIQDAWELFKAMPMKSVV 162
+ D A +LF M P+ + +A+L +G+ + GR + + + ++
Sbjct: 289 GQSDEALRLFRNMQASGIQPDSGALV-SALLACSNIGFLKLGRSVHGF-IVRRFDFNCIL 346
Query: 163 ASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEG 222
+ ++ + + G + A+++F+ + ++D W+ MI G + + LF M + G
Sbjct: 347 GTAAIDM-YSKCGSLASAQMLFNMISDRDLILWNAMIACCGAHGRGQDALTLFQEMNETG 405
Query: 223 VRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDV----YVASVLITMYIKCGEL 278
+R + + S+LS + ++ G+ ++V F + YV L+ + + G +
Sbjct: 406 MRPDHATFASLLSALSHSGLVEEGKLWFGRMVN-HFKITPAEKHYV--CLVDLLARSGLV 462
Query: 279 VKGKLIFDNF-ASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSS--GVMPDDVTLVGVL 335
+ + + A + +W +++SG L K L++ + + + PDDV ++ ++
Sbjct: 463 EEASDLLTSMKAEPTVAIWVALLSGC----LNNKKLELGESIADNILELQPDDVGVLALV 518
Query: 336 S----ACSYTGKVKEGREIFESMKSKYL 359
S A KV++ R++ + SK +
Sbjct: 519 SNLYAATKKWDKVRQVRKLMKDSGSKKM 546
>gi|302765827|ref|XP_002966334.1| hypothetical protein SELMODRAFT_86236 [Selaginella moellendorffii]
gi|300165754|gb|EFJ32361.1| hypothetical protein SELMODRAFT_86236 [Selaginella moellendorffii]
Length = 674
Score = 394 bits (1011), Expect = e-106, Method: Compositional matrix adjust.
Identities = 214/606 (35%), Positives = 333/606 (54%), Gaps = 41/606 (6%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MP+ + M+R + EA LF +PE++ W VM+ + + +++A +LF
Sbjct: 104 MPQWHPNPCAMMIRALGLRLRVAEARELFDLVPERDRFIWNVMVSAYAQRGDMNEAMKLF 163
Query: 61 DMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDV--A 118
M +DV+ T ++ G+ G E +F +P +SW TMI +N R D +
Sbjct: 164 LRMDGRDVITWTTVIRGFALLGVFHEAEALFARIPAATAVSWNTMI--VMNAERGDAVQS 221
Query: 119 RKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKS--VVASNSMILGLGQNGE 176
++LF+ MPE VS TAML Y Q GRI +A LF AMP +S V+ +M+ L +GE
Sbjct: 222 KRLFDRMPEPTIVSRTAMLGVYAQAGRIDEAEVLFSAMPEESRDTVSWTTMLQALALHGE 281
Query: 177 VQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSV 236
+ +A+ VFD+M +D W+ M+ + + +V L + R V++
Sbjct: 282 LDRAKEVFDRMPCRDAVAWTTMLAAFSQSAGNSDVKSAGALFHRMPQR-------DVVAG 334
Query: 237 CASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMW 296
A LA+ HG V L EL L + A +++V W
Sbjct: 335 NAMLAAYAHGGLVDQAL-----------------------ELFHSSL---HAADRNLVTW 368
Query: 297 NSIISGYAQYGLGEKSLKVFHEMFSSG-VMPDDVTLVGVLSACSYTGKVKEGREIFESMK 355
++++G+A G GE +L++F EM G MPD++ + VL AC + G VK R F +M
Sbjct: 369 TTLVAGFAHSGHGELALELFQEMILDGSAMPDEIIFLSVLGACGHVGLVKIARSFFLAMV 428
Query: 356 SKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLA 415
+ + + P EHY CM+D++ R G++ DA +L +MPF P+ ++W SL+ ACR L+L
Sbjct: 429 ADHGISPILEHYCCMIDIMARTGKLGDAEELANSMPFLPNDLVWASLIAACRNQQDLELG 488
Query: 416 EVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKK 475
A + ++ P N Y+LL+N+++ GRF + A +RK M ++ + K PG S I ++ +
Sbjct: 489 TRIATQAIEQSPGNYTAYVLLANLHSKAGRFEESARIRKLMAEKGLTKQPGASTIRIDGR 548
Query: 476 VHMFTGRDCVSHPEHPMIMRMLEKIGGLLRE-AGYCPDSSFVLHDVDEEEKVHSLRYHSE 534
V+ F D HP ++ +++I LLR+ G+ P+ + V+HDV E +KV L +HSE
Sbjct: 549 VYRFVAGDLSQHPHREEVLAAVDRICRLLRDHGGHSPEIAEVMHDVAEGDKVKILSHHSE 608
Query: 535 KLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLC 594
+LA+A G+ + G P+ ++KNLRVC DCHS IKL SK +GR I +RDA+RFHHF DG C
Sbjct: 609 RLAMALGVARTSPGAPLTIVKNLRVCSDCHSTIKLASKALGRRISVRDASRFHHFSDGKC 668
Query: 595 SCRDYW 600
SC+DYW
Sbjct: 669 SCQDYW 674
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 89/410 (21%), Positives = 165/410 (40%), Gaps = 69/410 (16%)
Query: 111 NNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILG 170
++ +D A +F + N SW A++ + Q G + + L MP MI
Sbjct: 59 SSTALDCAVGVFRGIHHPNLFSWNAIVGAHAQIGHLDQGYSLVLKMPQWHPNPCAMMIRA 118
Query: 171 LGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLM------------ 218
LG V +AR +FD + E+D W+ M+ Y ++G E + LF M
Sbjct: 119 LGLRLRVAEARELFDLVPERDRFIWNVMVSAYAQRGDMNEAMKLFLRMDGRDVITWTTVI 178
Query: 219 ----------QKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVA-SV 267
+ E + P+ +V + + + G V ++ + + V+ +
Sbjct: 179 RGFALLGVFHEAEALFARIPAATAVSWNTMIVMNAERGDAVQSKRLFDRMPEPTIVSRTA 238
Query: 268 LITMYIKCGELVKGKLIFDNFA--SKDIVMWNSIISGYAQYGLGEKSLKVFHEM------ 319
++ +Y + G + + +++F S+D V W +++ A +G +++ +VF M
Sbjct: 239 MLGVYAQAGRIDEAEVLFSAMPEESRDTVSWTTMLQALALHGELDRAKEVFDRMPCRDAV 298
Query: 320 --------FSSGVMPDDVTLVG----------------VLSACSYTGKVKEGREIFESMK 355
FS DV G +L+A ++ G V + E+F S
Sbjct: 299 AWTTMLAAFSQSAGNSDVKSAGALFHRMPQRDVVAGNAMLAAYAHGGLVDQALELFHS-- 356
Query: 356 SKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFE----PDAIIWGSLLGACRTHMK 411
S + + + +V +G E A++L + M + PD II+ S+LGAC
Sbjct: 357 SLHAADRNLVTWTTLVAGFAHSGHGELALELFQEMILDGSAMPDEIIFLSVLGACG---H 413
Query: 412 LDLAEVAAKKLLQLEPKNA-GP----YILLSNIYASQGRFHDVAELRKNM 456
+ L ++A L + + P Y + +I A G+ D EL +M
Sbjct: 414 VGLVKIARSFFLAMVADHGISPILEHYCCMIDIMARTGKLGDAEELANSM 463
>gi|302771271|ref|XP_002969054.1| hypothetical protein SELMODRAFT_90563 [Selaginella moellendorffii]
gi|300163559|gb|EFJ30170.1| hypothetical protein SELMODRAFT_90563 [Selaginella moellendorffii]
Length = 696
Score = 394 bits (1011), Expect = e-106, Method: Compositional matrix adjust.
Identities = 222/634 (35%), Positives = 356/634 (56%), Gaps = 42/634 (6%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM----PEKNVVSWTVMLGGF-----IRDS 51
M +++ +W++++ Y G A L+ +M E NVV++ LGG + D
Sbjct: 71 MEIKDLFAWSSIISAYARAGRGEMAVVLYRRMIAEGVEPNVVTFACALGGCASVAGLADG 130
Query: 52 RIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVN 111
R R L +P+ DV+ Q +++ Y + + E R++F+ M +NV S+T MIS YV
Sbjct: 131 RAIHQRILASKVPQDDVL-QDSLLNMYLKCDEMVEARKVFEGMKARNVRSYTAMISAYVQ 189
Query: 112 NNRIDVARKLFEVMP-----EKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMK----SVV 162
A +LF M E N ++ +L G ++ ++ + + + +VV
Sbjct: 190 AGEHAEALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEKGRKVHRHLASRGFDTNVV 249
Query: 163 ASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEG 222
N+++ G+ G +AR VFD M ++ +W+ MI Y + G E ++LF M E
Sbjct: 250 VQNALVTMYGKCGSPVEARKVFDSMTARNVISWTSMIAAYAQHGNPQEALNLFKRMDVEP 309
Query: 223 VRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGK 282
V+F S L+ CA L +LD GR++H ++V + + L++MY +CG L +
Sbjct: 310 SGVSFSS---ALNACALLGALDEGREIHHRVVEAHL-ASPQMETSLLSMYARCGSLDDAR 365
Query: 283 LIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTG 342
+F+ ++D N++I+ + Q+G +++L+++ M G+ D +T V VL ACS+T
Sbjct: 366 RVFNRMKTRDAFSCNAMIAAFTQHGRKKQALRIYRRMEQEGIPADGITFVSVLVACSHTS 425
Query: 343 KVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSL 402
V + R+ F+S+ + V P EHY CMVD+LGR+G++ DA +L+E MP++ DA+ W +L
Sbjct: 426 LVADCRDFFQSLVMDHGVVPLVEHYLCMVDVLGRSGRLGDAEELVETMPYQTDAVAWMTL 485
Query: 403 LGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVI 462
L C+ H L+ E AA+K+ +L P PY+ LSN+YA+ RF D +RK M +R V
Sbjct: 486 LSGCKRHGDLNRGERAARKVFELAPAETLPYVFLSNMYAAAKRFDDARRVRKEMEERGVT 545
Query: 463 KPPGCSWIEVEKKVHMFT--GRDCVSHPEHPMIMRMLEKIGGLL-------REAGYCPDS 513
P S+IE++ ++HMFT GRD + R +E++ LL ++AGY PD+
Sbjct: 546 TPVAVSYIEIDNELHMFTSGGRD---EQQEGHDGRTMERVRSLLLELLEPMKQAGYVPDT 602
Query: 514 SFVLHD----VDEEEKVHSLRYHSEKLAVAYGLV--KLP-EGVPIRVMKNLRVCGDCHSA 566
V + EEEK SL +HSE+LA+AYGL+ K P + P+RV+ + RVC DCHSA
Sbjct: 603 REVYLEQQGGTSEEEKQRSLCFHSERLAIAYGLIAAKDPDDSRPLRVVNSHRVCSDCHSA 662
Query: 567 IKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
IKL+S ++ + I +RD NRFHHF+ G CSC D+W
Sbjct: 663 IKLLSDIIEKTIFVRDGNRFHHFEKGACSCGDHW 696
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 105/395 (26%), Positives = 201/395 (50%), Gaps = 23/395 (5%)
Query: 32 MPEKNVVS----WTVMLGGFIRDSRIDDARRLFDMMP----EKDVVAQTNMVLGYCQDGR 83
M E+ +V+ T ++ + +++ RRL + + D+ +T ++ Y + G
Sbjct: 1 MEERGIVADKFIVTSLVAACTKLQALEEGRRLHEHLIITGFRTDIPLETALLQMYAKCGS 60
Query: 84 VDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVM----PEKNEVSWTAMLMG 139
+D+ + +F+ M K++ +W+++IS Y R ++A L+ M E N V++ L G
Sbjct: 61 LDDAKRVFEGMEIKDLFAWSSIISAYARAGRGEMAVVLYRRMIAEGVEPNVVTFACALGG 120
Query: 140 YTQCGRIQDAWELFKAMPMKSV----VASNSMILGLGQNGEVQKARVVFDQMREKDDATW 195
+ D + + + V V +S++ + E+ +AR VF+ M+ ++ ++
Sbjct: 121 CASVAGLADGRAIHQRILASKVPQDDVLQDSLLNMYLKCDEMVEARKVFEGMKARNVRSY 180
Query: 196 SGMIKVYERKGYELEVIDLFTLMQK-EGVRVNFPSLISVLSVCASLASLDHGRQVHAQLV 254
+ MI Y + G E ++LF+ M K E + N + ++L L +L+ GR+VH L
Sbjct: 181 TAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEKGRKVHRHLA 240
Query: 255 RCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLK 314
FD +V V + L+TMY KCG V+ + +FD+ +++++ W S+I+ YAQ+G +++L
Sbjct: 241 SRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTARNVISWTSMIAAYAQHGNPQEALN 300
Query: 315 VFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLL 374
+F M V P V+ L+AC+ G + EGREI + +L P+ E ++ +
Sbjct: 301 LFKRM---DVEPSGVSFSSALNACALLGALDEGREIHHRVVEAHLASPQME--TSLLSMY 355
Query: 375 GRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTH 409
R G ++DA ++ M DA +++ A H
Sbjct: 356 ARCGSLDDARRVFNRMKTR-DAFSCNAMIAAFTQH 389
>gi|297829702|ref|XP_002882733.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328573|gb|EFH58992.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 620
Score = 394 bits (1011), Expect = e-106, Method: Compositional matrix adjust.
Identities = 220/614 (35%), Positives = 346/614 (56%), Gaps = 29/614 (4%)
Query: 7 VSWTAMVRGYVEEGMITEAGTLFWQM----PEKNVVSWTVMLGGFIRDSRIDDARRLFDM 62
SW +R + + TE+ +L+ M + S+ +L S ++L
Sbjct: 16 TSWNVRLRELAYQSLFTESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCH 75
Query: 63 M----PEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNV--ISWTTMISGYVNNNRID 116
+ E + T ++ YC+ G V++ R++F+E P + + + +ISGY N+++
Sbjct: 76 VIRGGCEAEPFVLTALISMYCKCGLVEDARKVFEENPHSSQLGVCYNALISGYTANSKVS 135
Query: 117 VARKLFEVMPEKNEVSWTAMLMGYTQ-CGRIQDAW-------ELFKAMPMKSVVASNSMI 168
A +F M E + ++G C + W E K V NS I
Sbjct: 136 DAAFMFRRMKETGVSVDSVTILGLVPLCTVPEYLWLGRSLHGECVKGGTYSEVAVLNSFI 195
Query: 169 LGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFP 228
+ G V+ R +FD+M K TW+ +I Y + G +V++LF M+ GV +
Sbjct: 196 TMYMKCGSVESGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELFEQMKSSGVCPDPF 255
Query: 229 SLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNF 288
+L+SVLS CA L + G++V + F +V++++ LI+MY +CG L K + +FD
Sbjct: 256 TLVSVLSSCAHLGAKKIGQEVGELVEANGFAPNVFLSNALISMYARCGNLAKARAVFDIM 315
Query: 289 ASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGR 348
K +V W ++I Y +G+GE L +F +M G+ PD V VLSACS++G +G
Sbjct: 316 PVKSLVSWTAMIGCYGMHGMGETGLTLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGL 375
Query: 349 EIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRT 408
E+F +MK +Y +EP EHY+C+VDLLGRAG++++AM+ I++MP EPD +WG+LLGAC+
Sbjct: 376 ELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIDSMPVEPDGAVWGALLGACKI 435
Query: 409 HMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCS 468
H +D+AE+A K+++ EP N G Y+L+SNIY+ + +R MR+R K PG S
Sbjct: 436 HKNVDMAELAFAKVIEFEPMNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYS 495
Query: 469 WIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKI-GGLLREAGYCPDSSFVLHDVDEEEKVH 527
++E + KVH+F D SH + + RML+++ ++ AG D D E+V
Sbjct: 496 YVEHKGKVHLFLAGD-RSHEQTEEVHRMLDELETSVMELAGN--------MDCDRGEEVS 546
Query: 528 S-LRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRF 586
S R HSE+LA+A+G++ G I V+KNLRVC DCH IKL+SK++ R ++RDA+RF
Sbjct: 547 STTREHSERLAIAFGILNSIPGTEILVIKNLRVCEDCHVFIKLVSKIVDRRFVVRDASRF 606
Query: 587 HHFKDGLCSCRDYW 600
H+FKDG+CSC+DYW
Sbjct: 607 HYFKDGVCSCKDYW 620
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 94/217 (43%), Gaps = 18/217 (8%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MP + +++W A++ GY + G+ + LF QM V L + A+++
Sbjct: 214 MPVKGLITWNAVISGYSQNGLAYDVLELFEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIG 273
Query: 61 DMMPE--------KDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+ E +V ++ Y + G + + R +FD MP K+++SWT MI Y +
Sbjct: 274 QEVGELVEANGFAPNVFLSNALISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMH 333
Query: 113 NRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVAS---- 164
+ LF+ M ++ + + +L + G ELF+AM + +
Sbjct: 334 GMGETGLTLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEH 393
Query: 165 -NSMILGLGQNGEVQKARVVFDQMR-EKDDATWSGMI 199
+ ++ LG+ G + +A D M E D A W ++
Sbjct: 394 YSCLVDLLGRAGRLDEAMEFIDSMPVEPDGAVWGALL 430
>gi|449443909|ref|XP_004139718.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 642
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 210/601 (34%), Positives = 339/601 (56%), Gaps = 48/601 (7%)
Query: 22 ITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLG--YC 79
I A +F QMPE N W +L R+ ++ + ++ M+ C
Sbjct: 68 IDYARAVFRQMPEPNCFCWNTIL-------------RVLAETNDEHLQSEALMLFSAMLC 114
Query: 80 QDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPE----KNEVSWTA 135
DGRV K N ++ +++ +R+ +++ ++ + ++E +
Sbjct: 115 -DGRV-----------KPNRFTFPSVLKACARASRLREGKQIHGLIVKFGFHEDEFVISN 162
Query: 136 MLMGYTQCGRIQDAWELF----------------KAMPMKSVVASNSMILGLGQNGEVQK 179
++ Y C ++DA+ LF K +VV N MI G + G+++
Sbjct: 163 LVRMYVMCAVMEDAYSLFCKNVVDFDGSCQMELDKRKQDGNVVLWNIMIDGQVRLGDIKS 222
Query: 180 ARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCAS 239
A+ +FD+M ++ +W+ MI Y + G+ +E I+LF MQ + N+ +L+SVL A
Sbjct: 223 AKNLFDEMPQRSVVSWNVMISGYAQNGHFIEAINLFQEMQSSNIDPNYVTLVSVLPAIAR 282
Query: 240 LASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSI 299
+ +L+ G+ +H + + ++D + S L+ MY KCG + + +F+ ++ + W++I
Sbjct: 283 IGALELGKWIHLYAGKNKIEIDDVLGSALVDMYSKCGSIDEALQVFETLPKRNAITWSAI 342
Query: 300 ISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYL 359
I +A +G E ++ FH M +GV P+DV +G+LSACS+ G V+EGR F M
Sbjct: 343 IGAFAMHGRAEDAIIHFHLMGKAGVTPNDVAYIGILSACSHAGLVEEGRSFFSHMVKVVG 402
Query: 360 VEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAA 419
++P+ EHY CMVDLLGRAG +E+A +LI MP EPD +IW +LLGAC+ H L + E A
Sbjct: 403 LQPRIEHYGCMVDLLGRAGHLEEAEELIRNMPIEPDDVIWKALLGACKMHKNLKMGERVA 462
Query: 420 KKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMF 479
+ L++L P ++G Y+ LSN+YAS G + VA +R M+ ++ K PGCSWIE+ +H F
Sbjct: 463 ETLMELAPHDSGSYVALSNLYASLGNWEAVARVRLKMKGMDIRKDPGCSWIEIHGIIHEF 522
Query: 480 TGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVA 539
D SH + I ML ++ LR GY P++ V + DE+E+ +L+YHSEK+AVA
Sbjct: 523 LVED-DSHSKAKEIQAMLGEMSMKLRSNGYRPNTLEVFLNTDEQERARALQYHSEKIAVA 581
Query: 540 YGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDY 599
+GL+ P++++KNLR+C DCH+++KLIS + R+II+RD RFH F+ G CSC DY
Sbjct: 582 FGLISTAPQHPLKIVKNLRICEDCHASLKLISLIYKRQIIVRDRKRFHQFEHGSCSCMDY 641
Query: 600 W 600
W
Sbjct: 642 W 642
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 129/290 (44%), Gaps = 23/290 (7%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMP 64
NVV W M+ G V G I A LF +MP+++VVSW VM+ G+ ++ +A LF M
Sbjct: 203 NVVLWNIMIDGQVRLGDIKSAKNLFDEMPQRSVVSWNVMISGYAQNGHFIEAINLFQEMQ 262
Query: 65 EKDV----VAQTNMVLGYCQDGRVDEGREIFDEMPKKNV----ISWTTMISGYVNNNRID 116
++ V +++ + G ++ G+ I K + + + ++ Y ID
Sbjct: 263 SSNIDPNYVTLVSVLPAIARIGALELGKWIHLYAGKNKIEIDDVLGSALVDMYSKCGSID 322
Query: 117 VARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGL----G 172
A ++FE +P++N ++W+A++ + GR +DA F M V ++ +G+
Sbjct: 323 EALQVFETLPKRNAITWSAIIGAFAMHGRAEDAIIHFHLMGKAGVTPNDVAYIGILSACS 382
Query: 173 QNGEVQKARVVFDQM-----REKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNF 227
G V++ R F M + + M+ + R G+ E +L M E V +
Sbjct: 383 HAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGRAGHLEEAEELIRNMPIEPDDVIW 442
Query: 228 PSLISVLSVCASLASLDHGRQVHAQLVR-CQFDVDVYVASVLITMYIKCG 276
+L L C +L G +V L+ D YVA L +Y G
Sbjct: 443 KAL---LGACKMHKNLKMGERVAETLMELAPHDSGSYVA--LSNLYASLG 487
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 101/217 (46%), Gaps = 18/217 (8%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV----VSWTVMLGGFIRDSRIDDA 56
MP+R+VVSW M+ GY + G EA LF +M N+ V+ +L R ++
Sbjct: 230 MPQRSVVSWNVMISGYAQNGHFIEAINLFQEMQSSNIDPNYVTLVSVLPAIARIGALELG 289
Query: 57 RRLF----DMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+ + E D V + +V Y + G +DE ++F+ +PK+N I+W+ +I + +
Sbjct: 290 KWIHLYAGKNKIEIDDVLGSALVDMYSKCGSIDEALQVFETLPKRNAITWSAIIGAFAMH 349
Query: 113 NRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAMP-----MKSVVA 163
R + A F +M + N+V++ +L + G +++ F M +
Sbjct: 350 GRAEDAIIHFHLMGKAGVTPNDVAYIGILSACSHAGLVEEGRSFFSHMVKVVGLQPRIEH 409
Query: 164 SNSMILGLGQNGEVQKARVVFDQMR-EKDDATWSGMI 199
M+ LG+ G +++A + M E DD W ++
Sbjct: 410 YGCMVDLLGRAGHLEEAEELIRNMPIEPDDVIWKALL 446
>gi|356522522|ref|XP_003529895.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
mitochondrial-like [Glycine max]
Length = 911
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 210/618 (33%), Positives = 347/618 (56%), Gaps = 21/618 (3%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEK----NVVSWTVMLGGFI----RDSRID 54
+ N+ SW +++ Y G + A LF +M ++++W +L G + ++ +
Sbjct: 295 DHNLASWNSIISSYAVNGCLNGAWDLFREMESSSIKPDIITWNSLLSGHLLQGSYENVLT 354
Query: 55 DARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKK----NVISWTTMISGYV 110
+ R L + D + T+ + + G + G+EI + + +V T+++ Y+
Sbjct: 355 NIRSLQSAGFKPDSCSITSALQAVIELGYFNLGKEIHGYIMRSKLEYDVYVCTSLVDMYI 414
Query: 111 NNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVAS----NS 166
N+ ++ A +F KN +W +++ GYT G +A +L M + + A NS
Sbjct: 415 KNDCLEKAEVVFHHTKNKNICAWNSLISGYTYKGLFDNAEKLLIQMKEEGIKADLVTWNS 474
Query: 167 MILGLGQNGEVQKARVVFDQMRE----KDDATWSGMIKVYERKGYELEVIDLFTLMQKEG 222
++ G +G ++A V ++++ + +W+ MI + + + F+ MQ+E
Sbjct: 475 LVSGYSMSGCSEEALAVINRIKSLGLTPNVVSWTAMISGCCQNENYTDALQFFSQMQEEN 534
Query: 223 VRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGK 282
V+ N ++ ++L CA + L G ++H ++ F D+Y+A+ LI MY K G+L
Sbjct: 535 VKPNSTTISTLLRACAGPSLLKKGEEIHCFSMKHGFVDDIYIATALIDMYSKGGKLKVAH 594
Query: 283 LIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTG 342
+F N K + WN ++ GYA YG GE+ +F M +G+ PD +T +LS C +G
Sbjct: 595 EVFRNIKEKTLPCWNCMMMGYAIYGHGEEVFTLFDNMCKTGIRPDAITFTALLSGCKNSG 654
Query: 343 KVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSL 402
V +G + F+SMK+ Y + P EHY+CMVDLLG+AG +++A+ I AMP + DA IWG++
Sbjct: 655 LVMDGWKYFDSMKTDYSINPTIEHYSCMVDLLGKAGFLDEALDFIHAMPQKADASIWGAV 714
Query: 403 LGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVI 462
L ACR H + +AE+AA+ L +LEP N+ Y+L+ NIY++ R+ DV L+++M V
Sbjct: 715 LAACRLHKDIKIAEIAARNLFRLEPYNSANYVLMMNIYSTFERWGDVERLKESMTAMGVK 774
Query: 463 KPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDE 522
P SWI+V + +H+F+ + SHPE I L ++ +++ GY PD++ V ++D+
Sbjct: 775 IPNVWSWIQVRQTIHVFS-TEGKSHPEEGEIYFDLYQLISEIKKLGYVPDTNCVHQNIDD 833
Query: 523 EEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRD 582
EK L H+EKLA+ YGL+K+ G PIRV+KN R+C DCH+A K IS REI LRD
Sbjct: 834 SEKEKVLLSHTEKLAMTYGLMKIKGGTPIRVVKNTRICQDCHTAAKYISLARNREIFLRD 893
Query: 583 ANRFHHFKDGLCSCRDYW 600
RFHHF +G CSC D W
Sbjct: 894 GGRFHHFMNGECSCNDRW 911
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 102/407 (25%), Positives = 183/407 (44%), Gaps = 39/407 (9%)
Query: 11 AMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVA 70
A++ Y + I A +F + P + W ++ +R R +DA L M A
Sbjct: 171 ALINLYEKCLGIDRANQVFDETPLQEDFLWNTIVMANLRSERWEDALELSRRMQSASAKA 230
Query: 71 QTNMV---LGYCQDGR-VDEGREIFDEMPKKNVISWT----TMISGYVNNNRIDVARKLF 122
+ L C R ++EG++I + + +S T +++S Y NNR+++AR +F
Sbjct: 231 TDGTIVKLLQACGKLRALNEGKQIHGYVIRFGRVSNTSICNSIVSMYSRNNRLELARAVF 290
Query: 123 EVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARV 182
+ + N SW +++ Y G + AW+LF+ M S+
Sbjct: 291 DSTEDHNLASWNSIISSYAVNGCLNGAWDLFREMESSSI--------------------- 329
Query: 183 VFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLAS 242
+ D TW+ ++ + +G V+ +Q G + + S+ S L L
Sbjct: 330 ------KPDIITWNSLLSGHLLQGSYENVLTNIRSLQSAGFKPDSCSITSALQAVIELGY 383
Query: 243 LDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISG 302
+ G+++H ++R + + DVYV + L+ MYIK L K +++F + +K+I WNS+ISG
Sbjct: 384 FNLGKEIHGYIMRSKLEYDVYVCTSLVDMYIKNDCLEKAEVVFHHTKNKNICAWNSLISG 443
Query: 303 YAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEP 362
Y GL + + K+ +M G+ D VT ++S S +G +E + +KS L P
Sbjct: 444 YTYKGLFDNAEKLLIQMKEEGIKADLVTWNSLVSGYSMSGCSEEALAVINRIKSLGLT-P 502
Query: 363 KTEHYACMVDLLGRAGQVEDAMKLIEAMPFE---PDAIIWGSLLGAC 406
+ M+ + DA++ M E P++ +LL AC
Sbjct: 503 NVVSWTAMISGCCQNENYTDALQFFSQMQEENVKPNSTTISTLLRAC 549
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 124/287 (43%), Gaps = 5/287 (1%)
Query: 177 VQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSV 236
+ +A VFD+ ++D W+ ++ R + ++L MQ + +++ +L
Sbjct: 182 IDRANQVFDETPLQEDFLWNTIVMANLRSERWEDALELSRRMQSASAKATDGTIVKLLQA 241
Query: 237 CASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMW 296
C L +L+ G+Q+H ++R + + + +++MY + L + +FD+ ++ W
Sbjct: 242 CGKLRALNEGKQIHGYVIRFGRVSNTSICNSIVSMYSRNNRLELARAVFDSTEDHNLASW 301
Query: 297 NSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKS 356
NSIIS YA G + +F EM SS + PD +T +LS G + S++S
Sbjct: 302 NSIISSYAVNGCLNGAWDLFREMESSSIKPDIITWNSLLSGHLLQGSYENVLTNIRSLQS 361
Query: 357 KYLVEPKTEHYACM--VDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDL 414
+ + V LG ++ I E D + SL+ ++K D
Sbjct: 362 AGFKPDSCSITSALQAVIELGYFNLGKEIHGYIMRSKLEYDVYVCTSLVD---MYIKNDC 418
Query: 415 AEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNV 461
E A + KN + L + Y +G F + +L M++ +
Sbjct: 419 LEKAEVVFHHTKNKNICAWNSLISGYTYKGLFDNAEKLLIQMKEEGI 465
>gi|449457516|ref|XP_004146494.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Cucumis sativus]
Length = 650
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 215/601 (35%), Positives = 332/601 (55%), Gaps = 61/601 (10%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV--VSWTVMLGGFIRDSRIDDARRLFDM 62
N WTAM+RGY +G+++E+ + +M V VS+T + +M
Sbjct: 106 NPFLWTAMIRGYALQGLLSESTNFYTRMRRDGVGPVSFTF-------SALFKACGAALNM 158
Query: 63 MPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLF 122
K V AQT ++ G+ D YV N+ ID+
Sbjct: 159 DLGKQVHAQTILIGGFASDL--------------------------YVGNSMIDL----- 187
Query: 123 EVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARV 182
Y +CG + A ++F M + VV+ +I+ + G+++ A
Sbjct: 188 -----------------YVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASG 230
Query: 183 VFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLAS 242
+FD + KD W+ M+ Y + G E ++ F MQ G+ + +L V+S CA L +
Sbjct: 231 LFDDLPLKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGA 290
Query: 243 LDHGRQVHAQLVRCQF--DVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSII 300
+ H + R F +V V S LI MY KCG + +F+ +++ ++S+I
Sbjct: 291 VKHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMI 350
Query: 301 SGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLV 360
GYA +G +L++FH+M + + P+ VT +G+LSACS+ G V++GR++F M+ + V
Sbjct: 351 LGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLFAKMEKFFGV 410
Query: 361 EPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAK 420
P +HYACMVDLLGRAG +E+A+ L++ MP EP+ +WG+LLGACR H D+A++AA
Sbjct: 411 APSPDHYACMVDLLGRAGCLEEALDLVKTMPMEPNGGVWGALLGACRIHGNPDIAQIAAN 470
Query: 421 KLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEK-KVHMF 479
+L +LEP G YILLSNIYAS GR+ +V++LRK +R++ K PGCSW E + ++H F
Sbjct: 471 ELFKLEPNGIGNYILLSNIYASAGRWEEVSKLRKVIREKGFKKNPGCSWFEGKNGEIHDF 530
Query: 480 TGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVA 539
D +HP I + L+++ LR GY P+ +D+ ++EK L HSEKLA+A
Sbjct: 531 FAGD-TTHPRSSEIRQALKQLIERLRSHGYKPNLGSAPYDLTDDEKERILMSHSEKLALA 589
Query: 540 YGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDY 599
YGL+ G I++MKN+R+C DCH+ + S++ GREII+RD RFHHF +G CSC ++
Sbjct: 590 YGLLCTEAGDTIKIMKNIRICEDCHNVMCAASEITGREIIVRDNMRFHHFHNGTCSCGNF 649
Query: 600 W 600
W
Sbjct: 650 W 650
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 131/272 (48%), Gaps = 42/272 (15%)
Query: 182 VVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLA 241
+VF Q+ + W+ MI+ Y +G E + +T M+++GV + ++ C +
Sbjct: 97 LVFGQVNYPNPFLWTAMIRGYALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAAL 156
Query: 242 SLDHGRQVHAQLVRC-QFDVDVYVASVLITMYIKCG---------------------ELV 279
++D G+QVHAQ + F D+YV + +I +Y+KCG EL+
Sbjct: 157 NMDLGKQVHAQTILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELI 216
Query: 280 ----------KGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDV 329
+FD+ KD+V W ++++GYAQ G +++L+ F +M G+ D+V
Sbjct: 217 VAYAKYGDMESASGLFDDLPLKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEV 276
Query: 330 TLVGVLSACSYTGKVKEG---REIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKL 386
TL GV+SAC+ G VK R+I E +S + + ++D+ + G ++A K+
Sbjct: 277 TLAGVISACAQLGAVKHANWIRDIAE--RSGFGPSGNVVVGSALIDMYSKCGSPDEAYKV 334
Query: 387 IEAMP----FEPDAIIWGSLLGACRTHMKLDL 414
E M F ++I G + R H L L
Sbjct: 335 FEVMKERNVFSYSSMILGYAMHG-RAHSALQL 365
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 111/240 (46%), Gaps = 19/240 (7%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
M ER+VVSWT ++ Y + G + A LF +P K++V+WT M+ G+ ++ R +A F
Sbjct: 204 MSERDVVSWTELIVAYAKYGDMESASGLFDDLPLKDMVAWTAMVTGYAQNGRPKEALEYF 263
Query: 61 DMMP----EKDVVAQTNMVLGYCQDGRVDEGREIFDEM------PKKNVISWTTMISGYV 110
M E D V ++ Q G V I D P NV+ + +I Y
Sbjct: 264 QKMQDVGMETDEVTLAGVISACAQLGAVKHANWIRDIAERSGFGPSGNVVVGSALIDMYS 323
Query: 111 NNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILG 170
D A K+FEVM E+N S+++M++GY GR A +LF M + + +G
Sbjct: 324 KCGSPDEAYKVFEVMKERNVFSYSSMILGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIG 383
Query: 171 L----GQNGEVQKARVVFDQMRE-----KDDATWSGMIKVYERKGYELEVIDLFTLMQKE 221
+ G V++ R +F +M + ++ M+ + R G E +DL M E
Sbjct: 384 ILSACSHAGLVEQGRQLFAKMEKFFGVAPSPDHYACMVDLLGRAGCLEEALDLVKTMPME 443
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 100/233 (42%), Gaps = 15/233 (6%)
Query: 230 LISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGK---LIFD 286
L+S+L C + + +QVHA ++R YV + LI M K ++ G L+F
Sbjct: 45 LMSILHDCTLFSQI---KQVHAHIIRNGLSQCSYVLTKLIRMLTKV-DVPMGSYPLLVFG 100
Query: 287 NFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKE 346
+ +W ++I GYA GL +S + M GV P T + AC +
Sbjct: 101 QVNYPNPFLWTAMIRGYALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDL 160
Query: 347 GREIFESMKSKYLVEPKTEHYA--CMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLG 404
G+++ ++ + ++ Y M+DL + G + A K+ + M E D + W L+
Sbjct: 161 GKQV--HAQTILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMS-ERDVVSWTELIV 217
Query: 405 ACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMR 457
A + K E A+ L K+ + + YA GR + E + M+
Sbjct: 218 A---YAKYGDMESASGLFDDLPLKDMVAWTAMVTGYAQNGRPKEALEYFQKMQ 267
>gi|356511287|ref|XP_003524358.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 674
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 212/551 (38%), Positives = 315/551 (57%), Gaps = 26/551 (4%)
Query: 52 RIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVN 111
+ID R+LFD MP +DVV+ ++ G Q+G +E + EM K+N+ + +S
Sbjct: 148 KIDSVRKLFDRMPVRDVVSWNTVIAGNAQNGMYEEALNMVKEMGKENLRPDSFTLSS--- 204
Query: 112 NNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGL 171
+ + E V+ + GY I+ ++ K V +S+I
Sbjct: 205 ---------ILPIFTEHANVTKGKEIHGYA----IRHGFD-------KDVFIGSSLIDMY 244
Query: 172 GQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLI 231
+ +V+ + F + +D +W+ +I + G + + F M KE V+ S
Sbjct: 245 AKCTQVELSVCAFHLLSNRDAISWNSIIAGCVQNGRFDQGLGFFRRMLKEKVKPMQVSFS 304
Query: 232 SVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNF--A 289
SV+ CA L +L+ G+Q+HA ++R FD + ++AS L+ MY KCG + + IF+
Sbjct: 305 SVIPACAHLTALNLGKQLHAYIIRLGFDDNKFIASSLLDMYAKCGNIKMARYIFNKIEMC 364
Query: 290 SKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGRE 349
+D+V W +II G A +G ++ +F EM GV P V + VL+ACS+ G V EG +
Sbjct: 365 DRDMVSWTAIIMGCAMHGHALDAVSLFEEMLVDGVKPCYVAFMAVLTACSHAGLVDEGWK 424
Query: 350 IFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTH 409
F SM+ + V P EHYA + DLLGRAG++E+A I M EP +W +LL ACR H
Sbjct: 425 YFNSMQRDFGVAPGLEHYAAVADLLGRAGRLEEAYDFISNMGEEPTGSVWSTLLAACRAH 484
Query: 410 MKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSW 469
++LAE K+L ++P N G ++++SNIY++ R+ D A+LR MRK + K P CSW
Sbjct: 485 KNIELAEKVVNKILLVDPGNMGAHVIMSNIYSAAQRWRDAAKLRVRMRKTGLKKTPACSW 544
Query: 470 IEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSL 529
IEV KVH F D SHP + I L + + + GY D++ VLHDVDEE K L
Sbjct: 545 IEVGNKVHTFLAGD-KSHPYYDKINEALNILLEQMEKEGYVLDTNEVLHDVDEEHKRDLL 603
Query: 530 RYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHF 589
R HSE+LA+A+G++ G IRV+KN+RVC DCH+AIK ++K++GREII+RD +RFHHF
Sbjct: 604 RTHSERLAIAFGIISTTSGTTIRVIKNIRVCVDCHTAIKFMAKIVGREIIVRDNSRFHHF 663
Query: 590 KDGLCSCRDYW 600
K+G CSC DYW
Sbjct: 664 KNGSCSCGDYW 674
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 128/265 (48%), Gaps = 20/265 (7%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV----VSWTVMLGGFIRDSRIDDA 56
MP R+VVSW ++ G + GM EA + +M ++N+ + + +L F + +
Sbjct: 159 MPVRDVVSWNTVIAGNAQNGMYEEALNMVKEMGKENLRPDSFTLSSILPIFTEHANVTKG 218
Query: 57 RRLFDMMP----EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+ + +KDV ++++ Y + +V+ F + ++ ISW ++I+G V N
Sbjct: 219 KEIHGYAIRHGFDKDVFIGSSLIDMYAKCTQVELSVCAFHLLSNRDAISWNSIIAGCVQN 278
Query: 113 NRIDVARKLFEVMPEKN----EVSWTAML-----MGYTQCGRIQDAWELFKAMPMKSVVA 163
R D F M ++ +VS+++++ + G+ A+ + +A
Sbjct: 279 GRFDQGLGFFRRMLKEKVKPMQVSFSSVIPACAHLTALNLGKQLHAYIIRLGFDDNKFIA 338
Query: 164 SNSMILGLGQNGEVQKARVVFD--QMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKE 221
S S++ + G ++ AR +F+ +M ++D +W+ +I G+ L+ + LF M +
Sbjct: 339 S-SLLDMYAKCGNIKMARYIFNKIEMCDRDMVSWTAIIMGCAMHGHALDAVSLFEEMLVD 397
Query: 222 GVRVNFPSLISVLSVCASLASLDHG 246
GV+ + + ++VL+ C+ +D G
Sbjct: 398 GVKPCYVAFMAVLTACSHAGLVDEG 422
>gi|356496056|ref|XP_003516886.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Glycine max]
Length = 605
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 204/528 (38%), Positives = 319/528 (60%), Gaps = 10/528 (1%)
Query: 82 GRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEK----NEVSWTAML 137
G ++ IF ++ + + TMI G VN+ ++ A L+ M E+ + ++ +L
Sbjct: 79 GSMEYACSIFSQIEEPGSFEYNTMIRGNVNSMDLEEALLLYVEMLERGIEPDNFTYPFVL 138
Query: 138 MGYTQCGRIQDAWEL----FKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDA 193
+ +++ ++ FKA V N +I G+ G ++ A VVF+QM EK A
Sbjct: 139 KACSLLVALKEGVQIHAHVFKAGLEVDVFVQNGLISMYGKCGAIEHAGVVFEQMDEKSVA 198
Query: 194 TWSGMIKVYERKGYELEVIDLFTLMQKEGV-RVNFPSLISVLSVCASLASLDHGRQVHAQ 252
+WS +I + E + L M EG R L+S LS C L S + GR +H
Sbjct: 199 SWSSIIGAHASVEMWHECLMLLGDMSGEGRHRAEESILVSALSACTHLGSPNLGRCIHGI 258
Query: 253 LVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKS 312
L+R +++V V + LI MY+KCG L KG +F N A K+ + +I+G A +G G ++
Sbjct: 259 LLRNISELNVVVKTSLIDMYVKCGSLEKGLCVFQNMAHKNRYSYTVMIAGLAIHGRGREA 318
Query: 313 LKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVD 372
++VF +M G+ PDDV VGVLSACS+ G V EG + F M+ +++++P +HY CMVD
Sbjct: 319 VRVFSDMLEEGLTPDDVVYVGVLSACSHAGLVNEGLQCFNRMQFEHMIKPTIQHYGCMVD 378
Query: 373 LLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGP 432
L+GRAG +++A LI++MP +P+ ++W SLL AC+ H L++ E+AA+ + +L N G
Sbjct: 379 LMGRAGMLKEAYDLIKSMPIKPNDVVWRSLLSACKVHHNLEIGEIAAENIFRLNKHNPGD 438
Query: 433 YILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPM 492
Y++L+N+YA ++ +VA +R M ++++++ PG S +E + V+ F +D S P
Sbjct: 439 YLVLANMYARAKKWANVARIRTEMAEKHLVQTPGFSLVEANRNVYKFVSQD-KSQPICET 497
Query: 493 IMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIR 552
I M++++ L+ GY PD S VL DVDE+EK L++HS+KLA+A+ L++ EG PIR
Sbjct: 498 IYDMIQQMEWQLKFEGYTPDMSQVLLDVDEDEKRQRLKHHSQKLAIAFALIQTSEGSPIR 557
Query: 553 VMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
+ +NLR+C DCH+ K IS + REI +RD NRFHHFKDG CSC+DYW
Sbjct: 558 ISRNLRMCNDCHTYTKFISVIYEREITVRDRNRFHHFKDGTCSCKDYW 605
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 109/252 (43%), Gaps = 18/252 (7%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF-D 61
E +V ++ Y + G I AG +F QM EK+V SW+ ++G + L D
Sbjct: 163 EVDVFVQNGLISMYGKCGAIEHAGVVFEQMDEKSVASWSSIIGAHASVEMWHECLMLLGD 222
Query: 62 MMPEKDVVAQTNMV---LGYCQD-GRVDEGREI----FDEMPKKNVISWTTMISGYVNNN 113
M E A+ +++ L C G + GR I + + NV+ T++I YV
Sbjct: 223 MSGEGRHRAEESILVSALSACTHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKCG 282
Query: 114 RIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGL-- 171
++ +F+ M KN S+T M+ G GR ++A +F M + + + + +G+
Sbjct: 283 SLEKGLCVFQNMAHKNRYSYTVMIAGLAIHGRGREAVRVFSDMLEEGLTPDDVVYVGVLS 342
Query: 172 --GQNGEVQKA-----RVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVR 224
G V + R+ F+ M + + M+ + R G E DL M +
Sbjct: 343 ACSHAGLVNEGLQCFNRMQFEHMIKPTIQHYGCMVDLMGRAGMLKEAYDLIKSMPIKPND 402
Query: 225 VNFPSLISVLSV 236
V + SL+S V
Sbjct: 403 VVWRSLLSACKV 414
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 81/186 (43%), Gaps = 7/186 (3%)
Query: 222 GVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLIT--MYIKCGELV 279
+ N +S+L C S+ +QVHA +++ D + S L+ + G +
Sbjct: 26 NAKFNEQGWLSLLKRCKSMEEF---KQVHAHILKLGLFYDSFCGSNLVASCALSRWGSME 82
Query: 280 KGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACS 339
IF +N++I G E++L ++ EM G+ PD+ T VL ACS
Sbjct: 83 YACSIFSQIEEPGSFEYNTMIRGNVNSMDLEEALLLYVEMLERGIEPDNFTYPFVLKACS 142
Query: 340 YTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIW 399
+KEG +I + K +E ++ + G+ G +E A + E M E W
Sbjct: 143 LLVALKEGVQIHAHV-FKAGLEVDVFVQNGLISMYGKCGAIEHAGVVFEQMD-EKSVASW 200
Query: 400 GSLLGA 405
S++GA
Sbjct: 201 SSIIGA 206
>gi|79456853|ref|NP_191848.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75116883|sp|Q683I9.1|PP295_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g62890
gi|51968398|dbj|BAD42891.1| putative protein [Arabidopsis thaliana]
gi|332646886|gb|AEE80407.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 573
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 200/481 (41%), Positives = 301/481 (62%), Gaps = 8/481 (1%)
Query: 127 EKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQ 186
+K+ T++L Y+ CG ++ A +F K + A NS++ + G + AR +FD+
Sbjct: 94 DKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDE 153
Query: 187 MREKDDATWSGMIKVYERKGYELEVIDLFTLMQ-----KEGVRVNFPSLISVLSVCASLA 241
M E++ +WS +I Y G E +DLF MQ + VR N ++ +VLS C L
Sbjct: 154 MPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLG 213
Query: 242 SLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASK-DIVMWNSII 300
+L+ G+ VHA + + ++D+ + + LI MY KCG L + K +F+ SK D+ ++++I
Sbjct: 214 ALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMI 273
Query: 301 SGYAQYGLGEKSLKVFHEMFSS-GVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYL 359
A YGL ++ ++F EM +S + P+ VT VG+L AC + G + EG+ F+ M ++
Sbjct: 274 CCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFG 333
Query: 360 VEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAA 419
+ P +HY CMVDL GR+G +++A I +MP EPD +IWGSLL R + E A
Sbjct: 334 ITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGDIKTCEGAL 393
Query: 420 KKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMF 479
K+L++L+P N+G Y+LLSN+YA GR+ +V +R M + + K PGCS++EVE VH F
Sbjct: 394 KRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGINKVPGCSYVEVEGVVHEF 453
Query: 480 TGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVA 539
D S E I ML++I LREAGY D+ VL D++E++K +L YHSEKLA+A
Sbjct: 454 VVGD-ESQQESERIYAMLDEIMQRLREAGYVTDTKEVLLDLNEKDKEIALSYHSEKLAIA 512
Query: 540 YGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDY 599
+ L+K G P+R++KNLR+CGDCH +K+ISK+ REI++RD NRFHHF+DG CSCRD+
Sbjct: 513 FCLMKTRPGTPVRIIKNLRICGDCHLVMKMISKLFSREIVVRDCNRFHHFRDGSCSCRDF 572
Query: 600 W 600
W
Sbjct: 573 W 573
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 142/306 (46%), Gaps = 20/306 (6%)
Query: 20 GMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYC 79
G T A L + + +K+ T +L + + A+R+FD KD+ A ++V Y
Sbjct: 81 GQRTHAQILLFGL-DKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYA 139
Query: 80 QDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVM--PEKNEV----SW 133
+ G +D+ R++FDEMP++NVISW+ +I+GYV + A LF M P+ NE +
Sbjct: 140 KAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNE 199
Query: 134 TAMLMGYTQCGRI----QDAW---ELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQ 186
M + CGR+ Q W + K +V ++I + G +++A+ VF+
Sbjct: 200 FTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNA 259
Query: 187 MREKDDA-TWSGMIKVYERKGYELEVIDLFTLM-QKEGVRVNFPSLISVLSVCASLASLD 244
+ K D +S MI G E LF+ M + + N + + +L C ++
Sbjct: 260 LGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLIN 319
Query: 245 HGRQVHAQLVRCQFDVDVYVA--SVLITMYIKCGELVKGKLIFDNFA-SKDIVMWNSIIS 301
G+ ++ +F + + ++ +Y + G + + + + D+++W S++S
Sbjct: 320 EGKSYFKMMIE-EFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLS 378
Query: 302 GYAQYG 307
G G
Sbjct: 379 GSRMLG 384
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 104/228 (45%), Gaps = 37/228 (16%)
Query: 212 IDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITM 271
I ++ M+ V +F + +L + L G++ HAQ++ D D +V + L+ M
Sbjct: 47 ISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRTHAQILLFGLDKDPFVRTSLLNM 106
Query: 272 YIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVM------ 325
Y CG+L + +FD+ SKD+ WNS+++ YA+ GL + + K+F EM V+
Sbjct: 107 YSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLI 166
Query: 326 ------------------------------PDDVTLVGVLSACSYTGKVKEGREIFESMK 355
P++ T+ VLSAC G +++G+ + +
Sbjct: 167 NGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWV-HAYI 225
Query: 356 SKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
KY VE ++D+ + G +E A ++ A+ + D + +++
Sbjct: 226 DKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMI 273
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 119/253 (47%), Gaps = 24/253 (9%)
Query: 4 RNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMM 63
+++ +W ++V Y + G+I +A LF +MPE+NV+SW+ ++ G++ + +A LF M
Sbjct: 126 KDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREM 185
Query: 64 ----PEKDVVAQT----NMVLGYC-QDGRVDEGREIFDEMPKKNV----ISWTTMISGYV 110
P + V + VL C + G +++G+ + + K +V + T +I Y
Sbjct: 186 QLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYA 245
Query: 111 NNNRIDVARKLFEVMPEKNEV-SWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSM-- 167
++ A+++F + K +V +++AM+ G + ++LF M + NS+
Sbjct: 246 KCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTF 305
Query: 168 --ILGLG-QNGEVQKARVVFDQMREKDDAT-----WSGMIKVYERKGYELEVIDLFTLMQ 219
ILG G + + + F M E+ T + M+ +Y R G E M
Sbjct: 306 VGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMP 365
Query: 220 KEGVRVNFPSLIS 232
E + + SL+S
Sbjct: 366 MEPDVLIWGSLLS 378
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 120/282 (42%), Gaps = 59/282 (20%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLF--WQMPEKN---------------------- 36
MPERNV+SW+ ++ GYV G EA LF Q+P+ N
Sbjct: 154 MPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLG 213
Query: 37 --------------------VVSWTVMLGGFIRDSRIDDARRLFDMM-PEKDVVAQTNMV 75
+V T ++ + + ++ A+R+F+ + +KDV A + M+
Sbjct: 214 ALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMI 273
Query: 76 LGYCQDGRVDEGREIFDEMPKK-----NVISWTTMISGYVNNNRIDVARKLFEVMPEKNE 130
G DE ++F EM N +++ ++ V+ I+ + F++M E+
Sbjct: 274 CCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFG 333
Query: 131 VS-----WTAMLMGYTQCGRIQDAWELFKAMPMK-SVVASNSMILGLGQNGEVQKARVVF 184
++ + M+ Y + G I++A +MPM+ V+ S++ G G+++
Sbjct: 334 ITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGDIKTCEGAL 393
Query: 185 DQMREKD---DATWSGMIKVYERKGYELEVIDLFTLMQKEGV 223
++ E D + + VY + G +EV + M+ +G+
Sbjct: 394 KRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGI 435
>gi|225428117|ref|XP_002278375.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
mitochondrial [Vitis vinifera]
Length = 681
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 194/490 (39%), Positives = 307/490 (62%), Gaps = 20/490 (4%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
M ERNVVSW AMV G+++ G + A F +MPE++ S + ++ G I++ +D+A+R+
Sbjct: 188 MQERNVVSWNAMVTGFLQNGDVERAIEFFMRMPERDSASLSALVAGLIQNGELDEAKRIL 247
Query: 61 DMMPEKD-----VVAQTNMVL-GYCQDGRVDEGREIFDEMP------------KKNVISW 102
+D +V N++L GY Q+GRVD+ R++FD++P ++NV+SW
Sbjct: 248 LTSRRQDDDKGDLVHAYNILLAGYGQNGRVDKARQLFDQIPFYDGGQKDGGRFERNVVSW 307
Query: 103 TTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVV 162
+MI YV I AR LF+ M E++ +SW M+ GY + +++AW LF+ MP +
Sbjct: 308 NSMIMCYVKARDIFSARVLFDQMKERDTISWNTMISGYVRMSDMEEAWMLFQEMPNPDTL 367
Query: 163 ASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEG 222
NSMI G Q G ++ AR +F + +K+ +W+ MI YE G +L+ M +G
Sbjct: 368 TWNSMISGFAQKGNLELARALFATIPQKNLVSWNSMIAGYENNGDYKGATELYRQMLLQG 427
Query: 223 VRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGK 282
+ + +L SVLSVC+ A+L G Q+H Q+ + D+ + + LITMY +CG +V+ +
Sbjct: 428 EKPDRHTLSSVLSVCSGFAALHLGMQIHQQITKTVIP-DIPINNSLITMYSRCGAIVEAR 486
Query: 283 LIFDNFA-SKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYT 341
IFD K+++ WN++I GYA +G +L++F M V P +T + VL+AC++
Sbjct: 487 TIFDEVKLQKEVISWNAMIGGYAFHGFAADALELFELMKRLKVRPTYITFISVLNACAHA 546
Query: 342 GKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGS 401
G VKEGR F+SM ++ +EP+ EH+A +VD++GR GQ+E+AM LI +MPFEPD +WG+
Sbjct: 547 GFVKEGRMHFKSMACEFGIEPRIEHFASLVDIVGRHGQLEEAMDLINSMPFEPDKAVWGA 606
Query: 402 LLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNV 461
LLGACR H ++LA VAA+ L++LEP+++ PY+LL N+YA G++ + E+R M + N+
Sbjct: 607 LLGACRVHNNVELARVAAEALMKLEPESSAPYVLLHNMYADVGQWDNATEMRMMMERNNI 666
Query: 462 IKPPGCSWIE 471
K PG SW++
Sbjct: 667 RKQPGYSWVD 676
Score = 208 bits (530), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 121/429 (28%), Positives = 222/429 (51%), Gaps = 30/429 (6%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFI--RDSRIDDARR 58
MP+RN+V+W +M+ GYV + +A LF +MP+++VVSW +M+ G++ + +++ R
Sbjct: 93 MPQRNIVTWNSMITGYVRRREMAKARKLFDEMPDRDVVSWNLMISGYVSCQGRWVEEGRH 152
Query: 59 LFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVA 118
LFD MPE+D V+ M+ GY + GR+DE ++FD M ++NV+SW M++G++ N ++ A
Sbjct: 153 LFDEMPERDCVSWNTMISGYTRSGRMDEALQLFDSMQERNVVSWNAMVTGFLQNGDVERA 212
Query: 119 RKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKS------VVASNSMILGLG 172
+ F MPE++ S +A++ G Q G + +A + + V A N ++ G G
Sbjct: 213 IEFFMRMPERDSASLSALVAGLIQNGELDEAKRILLTSRRQDDDKGDLVHAYNILLAGYG 272
Query: 173 QNGEVQKARVVFDQMR------------EKDDATWSGMIKVYERKGYELEVIDLFTLMQK 220
QNG V KAR +FDQ+ E++ +W+ MI Y + LF M K
Sbjct: 273 QNGRVDKARQLFDQIPFYDGGQKDGGRFERNVVSWNSMIMCYVKARDIFSARVLFDQM-K 331
Query: 221 EGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVK 280
E +++ ++IS ++ ++ + ++ + D + +I+ + + G L
Sbjct: 332 ERDTISWNTMISGY---VRMSDMEEAWMLFQEMP----NPDTLTWNSMISGFAQKGNLEL 384
Query: 281 GKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSY 340
+ +F K++V WNS+I+GY G + + +++ +M G PD TL VLS CS
Sbjct: 385 ARALFATIPQKNLVSWNSMIAGYENNGDYKGATELYRQMLLQGEKPDRHTLSSVLSVCSG 444
Query: 341 TGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWG 400
+ G +I + + V P ++ + R G + +A + + + + + I W
Sbjct: 445 FAALHLGMQIHQQITKT--VIPDIPINNSLITMYSRCGAIVEARTIFDEVKLQKEVISWN 502
Query: 401 SLLGACRTH 409
+++G H
Sbjct: 503 AMIGGYAFH 511
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 101/395 (25%), Positives = 184/395 (46%), Gaps = 55/395 (13%)
Query: 67 DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMP 126
D+ + ++GR++E R +FD MP++N+++W +MI+GYV + ARKLF+ MP
Sbjct: 66 DLYTPNKRISHLIRNGRINEARALFDAMPQRNIVTWNSMITGYVRRREMAKARKLFDEMP 125
Query: 127 EKNEVSWTAMLMGYTQC-GR-IQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVF 184
+++ VSW M+ GY C GR +++ LF MP + V+ N+MI G ++G + +A +F
Sbjct: 126 DRDVVSWNLMISGYVSCQGRWVEEGRHLFDEMPERDCVSWNTMISGYTRSGRMDEALQLF 185
Query: 185 DQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQK--------------------EGVR 224
D M+E++ +W+ M+ + + G I+ F M + E R
Sbjct: 186 DSMQERNVVSWNAMVTGFLQNGDVERAIEFFMRMPERDSASLSALVAGLIQNGELDEAKR 245
Query: 225 VNFPS---------LISVLSVC----ASLASLDHGRQVHAQLV--------RCQFDVDVY 263
+ S L+ ++ +D RQ+ Q+ +F+ +V
Sbjct: 246 ILLTSRRQDDDKGDLVHAYNILLAGYGQNGRVDKARQLFDQIPFYDGGQKDGGRFERNVV 305
Query: 264 VASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSG 323
+ +I Y+K ++ +++FD +D + WN++ISGY + E++ +F EM +
Sbjct: 306 SWNSMIMCYVKARDIFSARVLFDQMKERDTISWNTMISGYVRMSDMEEAWMLFQEMPN-- 363
Query: 324 VMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDA 383
PD +T ++S + G ++ R +F ++ K LV + M+ G + A
Sbjct: 364 --PDTLTWNSMISGFAQKGNLELARALFATIPQKNLVS-----WNSMIAGYENNGDYKGA 416
Query: 384 MKLIEAMPFE---PDAIIWGSLLGACRTHMKLDLA 415
+L M + PD S+L C L L
Sbjct: 417 TELYRQMLLQGEKPDRHTLSSVLSVCSGFAALHLG 451
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 83/153 (54%), Gaps = 10/153 (6%)
Query: 252 QLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEK 311
Q + +D+Y + I+ I+ G + + + +FD ++IV WNS+I+GY + K
Sbjct: 57 QQPKNSVSLDLYTPNKRISHLIRNGRINEARALFDAMPQRNIVTWNSMITGYVRRREMAK 116
Query: 312 SLKVFHEMFSSGVMPDDVTLVGVLSACSYTGK-VKEGREIFESMKSKYLVEPKTEHYACM 370
+ K+F EM V+ ++ + G +S G+ V+EGR +F+ M + V T M
Sbjct: 117 ARKLFDEMPDRDVVSWNLMISGYVSC---QGRWVEEGRHLFDEMPERDCVSWNT-----M 168
Query: 371 VDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
+ R+G++++A++L ++M E + + W +++
Sbjct: 169 ISGYTRSGRMDEALQLFDSMQ-ERNVVSWNAMV 200
>gi|297743669|emb|CBI36552.3| unnamed protein product [Vitis vinifera]
Length = 726
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 219/590 (37%), Positives = 325/590 (55%), Gaps = 57/590 (9%)
Query: 66 KDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVM 125
D+ + +V Y + RV R++FD M +++ + W TM+SG V N+ D A +F M
Sbjct: 139 SDLFVGSAIVACYFKFSRVAAARKVFDGMLERDTVLWNTMVSGLVKNSCFDEAILIFGDM 198
Query: 126 PEK----NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNS-MILGLG----QNGE 176
+ + + A+L G + + + + + MK S++ +I GL + GE
Sbjct: 199 VKGGIGFDSTTVAAVLPGVAELQDLALGMGI-QCLAMKVGFHSHAYVITGLACLYSKCGE 257
Query: 177 VQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSV 236
++ AR++F Q+ + D +++ MI Y + LF + G +VN S++ ++ V
Sbjct: 258 IETARLLFGQIGQPDLVSYNAMISGYTCNNETESSVRLFKELLVSGEKVNSSSIVGLIPV 317
Query: 237 CASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMW 296
L R +H + + V++ L T+Y + E+ +L+FD + K + W
Sbjct: 318 FFPFGHLHLTRCIHGFCTKSGVVSNSSVSTALTTVYSRLNEIESARLLFDESSEKSLASW 377
Query: 297 NSIISGYAQYGLGEKSLKVFHEM------------------------------------- 319
N++ISGYAQ GL EK++ +F EM
Sbjct: 378 NAMISGYAQNGLTEKAISLFQEMQKCEVRPNPVTVTSILSACAQLGALSLGKWVHDLINR 437
Query: 320 ---------FSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACM 370
S V P VT + VL ACS+ G V+EG EIF SM + EP EHYACM
Sbjct: 438 ESFESNIFMLHSRVSPTGVTFLSVLYACSHAGLVREGDEIFRSMVHDHGFEPLPEHYACM 497
Query: 371 VDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNA 430
VDLLGRAG ++ A+ I MP EP +WG+LLGAC H +LA +A+ KL +L+P+N
Sbjct: 498 VDLLGRAGNLDKALDFIRKMPVEPGPPVWGALLGACMIHKDANLARLASDKLFELDPQNV 557
Query: 431 GPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEH 490
G Y+LLSNIY++ + + A +R +++R + K PGC+ IEV +H+FT D SHP+
Sbjct: 558 GYYVLLSNIYSAGQNYPEAASVRGVVKRRKLAKTPGCTLIEVANTLHIFTSGD-QSHPQA 616
Query: 491 PMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVP 550
I MLEK+ G +REAG+ ++ LHDV+EEEK ++ HSEKLA+A+GL+ G
Sbjct: 617 TAIYAMLEKLTGKMREAGFQTETGTALHDVEEEEKELMVKVHSEKLAIAFGLITSEPGTE 676
Query: 551 IRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
IR++KNLRVC DCH+A K ISK+ R I++RDANRFHHFKDG+CSC DYW
Sbjct: 677 IRIIKNLRVCLDCHNATKFISKITERVIVVRDANRFHHFKDGICSCGDYW 726
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 86/397 (21%), Positives = 152/397 (38%), Gaps = 51/397 (12%)
Query: 65 EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVA------ 118
D+V T + +D+ +F +P ++ + +I + NN A
Sbjct: 39 HNDLVTVTKLTHKLSHLKAIDQASLLFSTIPNPDLFLYNVLIRAFSLNNSPSSAVSLYTH 98
Query: 119 -RKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEV 177
RK + P+ ++ G + A + V S +++ + V
Sbjct: 99 LRKSTPLEPDNFTYAFVISGASSLGLGLLLHAHSIVAGFGSDLFVGS-AIVACYFKFSRV 157
Query: 178 QKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVC 237
AR VFD M E+D W+ M+ + E I +F M K G+ + ++ +VL
Sbjct: 158 AAARKVFDGMLERDTVLWNTMVSGLVKNSCFDEAILIFGDMVKGGIGFDSTTVAAVLPGV 217
Query: 238 ASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWN 297
A L L G + ++ F YV + L +Y KCGE+ +L+F D+V +N
Sbjct: 218 AELQDLALGMGIQCLAMKVGFHSHAYVITGLACLYSKCGEIETARLLFGQIGQPDLVSYN 277
Query: 298 SIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGV-----------LSAC-------- 338
++ISGY E S+++F E+ SG + ++VG+ L+ C
Sbjct: 278 AMISGYTCNNETESSVRLFKELLVSGEKVNSSSIVGLIPVFFPFGHLHLTRCIHGFCTKS 337
Query: 339 ----------------SYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVED 382
S +++ R +F+ K L + M+ + G E
Sbjct: 338 GVVSNSSVSTALTTVYSRLNEIESARLLFDESSEKSLAS-----WNAMISGYAQNGLTEK 392
Query: 383 AMKLIEAMP---FEPDAIIWGSLLGACRTHMKLDLAE 416
A+ L + M P+ + S+L AC L L +
Sbjct: 393 AISLFQEMQKCEVRPNPVTVTSILSACAQLGALSLGK 429
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 53/272 (19%), Positives = 118/272 (43%), Gaps = 5/272 (1%)
Query: 177 VQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSV 236
+ +A ++F + D ++ +I+ + + L+T ++K P + V
Sbjct: 58 IDQASLLFSTIPNPDLFLYNVLIRAFSLNNSPSSAVSLYTHLRKSTPLE--PDNFTYAFV 115
Query: 237 CASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMW 296
+ +SL G +HA + F D++V S ++ Y K + + +FD +D V+W
Sbjct: 116 ISGASSLGLGLLLHAHSIVAGFGSDLFVGSAIVACYFKFSRVAAARKVFDGMLERDTVLW 175
Query: 297 NSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKS 356
N+++SG + ++++ +F +M G+ D T+ VL + + G I + +
Sbjct: 176 NTMVSGLVKNSCFDEAILIFGDMVKGGIGFDSTTVAAVLPGVAELQDLALGMGI-QCLAM 234
Query: 357 KYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAE 416
K + L + G++E A +L+ +PD + + +++ + + + +
Sbjct: 235 KVGFHSHAYVITGLACLYSKCGEIETA-RLLFGQIGQPDLVSYNAMISGYTCNNETESSV 293
Query: 417 VAAKKLL-QLEPKNAGPYILLSNIYASQGRFH 447
K+LL E N+ + L ++ G H
Sbjct: 294 RLFKELLVSGEKVNSSSIVGLIPVFFPFGHLH 325
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 81/188 (43%), Gaps = 33/188 (17%)
Query: 41 TVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPK---- 96
T + + R + I+ AR LFD EK + + M+ GY Q+G ++ +F EM K
Sbjct: 347 TALTTVYSRLNEIESARLLFDESSEKSLASWNAMISGYAQNGLTEKAISLFQEMQKCEVR 406
Query: 97 KNVISWTTMISGYVNNNRID--------VARKLFE---------VMPEKNEVSWTAMLMG 139
N ++ T+++S + + R+ FE V P V++ ++L
Sbjct: 407 PNPVTVTSILSACAQLGALSLGKWVHDLINRESFESNIFMLHSRVSPTG--VTFLSVLYA 464
Query: 140 YTQCGRIQDAWELFKAM-------PMKSVVASNSMILGLGQNGEVQKARVVFDQMR-EKD 191
+ G +++ E+F++M P+ A M+ LG+ G + KA +M E
Sbjct: 465 CSHAGLVREGDEIFRSMVHDHGFEPLPEHYA--CMVDLLGRAGNLDKALDFIRKMPVEPG 522
Query: 192 DATWSGMI 199
W ++
Sbjct: 523 PPVWGALL 530
>gi|125557337|gb|EAZ02873.1| hypothetical protein OsI_25005 [Oryza sativa Indica Group]
Length = 651
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 201/469 (42%), Positives = 293/469 (62%), Gaps = 4/469 (0%)
Query: 134 TAMLMGYTQCGRIQDAWELFKAMP-MKSVVASNSMILGLGQNGEVQKARVVFDQMREKDD 192
A++ Y G + +F +P ++ V+ N ++ G + G + AR VFD+M +D+
Sbjct: 185 NALVHFYGVSGDVGAMRRVFDELPRVRDVLTWNEVLAGYVRAGMMTVAREVFDEMPVRDE 244
Query: 193 ATWSGMIKVYERKGYELEV-IDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHA 251
+WS ++ Y ++ ELEV + +F M ++GVR N ++++ LS A L L+HG+ VH
Sbjct: 245 ISWSTLVGGYVKE-EELEVALGVFRNMVEQGVRPNQAAVVTALSAAARLGLLEHGKFVHN 303
Query: 252 QLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEK 311
+ R V + V + L+ MY KCG + + +FD +D+ WN++I G A +GLG
Sbjct: 304 VVQRSGMPVCMNVGAALVDMYAKCGCVAVAREVFDGMRRRDVFAWNAMICGLAAHGLGRD 363
Query: 312 SLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMV 371
++++F S G+ P +VT VGVL+ CS +G V EGR F+ + KY +EP+ EHY CMV
Sbjct: 364 AVELFERFISEGLSPTNVTFVGVLNGCSRSGLVAEGRRYFKLIVEKYRIEPEMEHYGCMV 423
Query: 372 DLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAG 431
DLLGRAG V +A++LIE M PD ++WG++L +C+TH +DL KL++L+P ++G
Sbjct: 424 DLLGRAGLVPEAIELIEGMHIAPDPVLWGTILSSCKTHGLVDLGVSVGNKLIELDPTHSG 483
Query: 432 PYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHP 491
Y+LLS IYA ++ +V E+RK M R K G S +E KVH F D H +
Sbjct: 484 YYVLLSGIYAKANKWDEVREVRKLMSSRGTNKSAGWSLMEAHGKVHKFLVGDTY-HKDSV 542
Query: 492 MIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPI 551
I L+ I L EAGY PD S VLHD+ EEEKVH+++ HSE+LA+AYG + L G PI
Sbjct: 543 QIYDTLDMINKRLTEAGYVPDVSSVLHDIGEEEKVHAVKVHSERLAIAYGFIVLEAGSPI 602
Query: 552 RVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
R++KNLRVCGDCH K+++ V REII+RD +RFHH K+G CSC DYW
Sbjct: 603 RIVKNLRVCGDCHEFSKMVTMVFQREIIVRDGSRFHHMKEGKCSCLDYW 651
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 84/321 (26%), Positives = 153/321 (47%), Gaps = 35/321 (10%)
Query: 57 RRLFDMMPE-KDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRI 115
RR+FD +P +DV+ ++ GY + G + RE+FDEMP ++ ISW+T++ GYV +
Sbjct: 201 RRVFDELPRVRDVLTWNEVLAGYVRAGMMTVAREVFDEMPVRDEISWSTLVGGYVKEEEL 260
Query: 116 DVARKLFEVMPEK----NEVSWTAML-----MGYTQCGRIQDAWELFKAMPMKSVVASNS 166
+VA +F M E+ N+ + L +G + G+ MP+ V + +
Sbjct: 261 EVALGVFRNMVEQGVRPNQAAVVTALSAAARLGLLEHGKFVHNVVQRSGMPVCMNVGA-A 319
Query: 167 MILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVN 226
++ + G V AR VFD MR +D W+ MI G + ++LF EG+
Sbjct: 320 LVDMYAKCGCVAVAREVFDGMRRRDVFAWNAMICGLAAHGLGRDAVELFERFISEGLSPT 379
Query: 227 FPSLISVLSVCASLASLDHGRQVHAQLV---RCQFDVDVYVASVLITMYIKCG------E 277
+ + VL+ C+ + GR+ +V R + +++ Y ++ + + G E
Sbjct: 380 NVTFVGVLNGCSRSGLVAEGRRYFKLIVEKYRIEPEMEHY--GCMVDLLGRAGLVPEAIE 437
Query: 278 LVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFS-----SGVMPDDVTLV 332
L++G I + D V+W +I+S +GL + + V +++ SG V L
Sbjct: 438 LIEGMHI-----APDPVLWGTILSSCKTHGLVDLGVSVGNKLIELDPTHSGYY---VLLS 489
Query: 333 GVLSACSYTGKVKEGREIFES 353
G+ + + +V+E R++ S
Sbjct: 490 GIYAKANKWDEVREVRKLMSS 510
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 132/270 (48%), Gaps = 24/270 (8%)
Query: 4 RNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMM 63
R+V++W ++ GYV GM+T A +F +MP ++ +SW+ ++GG++++ ++ A +F M
Sbjct: 211 RDVLTWNEVLAGYVRAGMMTVAREVFDEMPVRDEISWSTLVGGYVKEEELEVALGVFRNM 270
Query: 64 PEKDV----VAQTNMVLGYCQDGRVDEGREIFDEMPKKNVI----SWTTMISGYVNNNRI 115
E+ V A + + G ++ G+ + + + + + ++ Y +
Sbjct: 271 VEQGVRPNQAAVVTALSAAARLGLLEHGKFVHNVVQRSGMPVCMNVGAALVDMYAKCGCV 330
Query: 116 DVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGL---- 171
VAR++F+ M ++ +W AM+ G G +DA ELF+ + + +N +G+
Sbjct: 331 AVAREVFDGMRRRDVFAWNAMICGLAAHGLGRDAVELFERFISEGLSPTNVTFVGVLNGC 390
Query: 172 GQNGEVQKARVVFDQMREK-----DDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVN 226
++G V + R F + EK + + M+ + R G E I+L EG+ +
Sbjct: 391 SRSGLVAEGRRYFKLIVEKYRIEPEMEHYGCMVDLLGRAGLVPEAIELI-----EGMHIA 445
Query: 227 FPSLI--SVLSVCASLASLDHGRQVHAQLV 254
++ ++LS C + +D G V +L+
Sbjct: 446 PDPVLWGTILSSCKTHGLVDLGVSVGNKLI 475
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 94/216 (43%), Gaps = 17/216 (7%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEK----NVVSWTVMLGGFIRDSRIDDA 56
MP R+ +SW+ +V GYV+E + A +F M E+ N + L R ++
Sbjct: 239 MPVRDEISWSTLVGGYVKEEELEVALGVFRNMVEQGVRPNQAAVVTALSAAARLGLLEHG 298
Query: 57 RRLFDMMPEKDVVAQTN----MVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+ + +++ + N +V Y + G V RE+FD M +++V +W MI G +
Sbjct: 299 KFVHNVVQRSGMPVCMNVGAALVDMYAKCGCVAVAREVFDGMRRRDVFAWNAMICGLAAH 358
Query: 113 NRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVAS---- 164
A +LFE + V++ +L G ++ G + + FK + K +
Sbjct: 359 GLGRDAVELFERFISEGLSPTNVTFVGVLNGCSRSGLVAEGRRYFKLIVEKYRIEPEMEH 418
Query: 165 -NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMI 199
M+ LG+ G V +A + + M D G I
Sbjct: 419 YGCMVDLLGRAGLVPEAIELIEGMHIAPDPVLWGTI 454
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 85/208 (40%), Gaps = 41/208 (19%)
Query: 235 SVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFAS-KDI 293
S C+ L G VHA V+ D++V + L+ Y G++ + +FD +D+
Sbjct: 159 SACSFL-----GSHVHALAVKAGAAGDLFVRNALVHFYGVSGDVGAMRRVFDELPRVRDV 213
Query: 294 VMWNSIISGYAQYGLG-------------------------------EKSLKVFHEMFSS 322
+ WN +++GY + G+ E +L VF M
Sbjct: 214 LTWNEVLAGYVRAGMMTVAREVFDEMPVRDEISWSTLVGGYVKEEELEVALGVFRNMVEQ 273
Query: 323 GVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHY-ACMVDLLGRAGQVE 381
GV P+ +V LSA + G ++ G+ + ++ + P + A +VD+ + G V
Sbjct: 274 GVRPNQAAVVTALSAAARLGLLEHGKFVHNVVQRSGM--PVCMNVGAALVDMYAKCGCVA 331
Query: 382 DAMKLIEAMPFEPDAIIWGSLLGACRTH 409
A ++ + M D W +++ H
Sbjct: 332 VAREVFDGMR-RRDVFAWNAMICGLAAH 358
>gi|357166812|ref|XP_003580863.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15130-like [Brachypodium distachyon]
Length = 707
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 232/659 (35%), Positives = 355/659 (53%), Gaps = 74/659 (11%)
Query: 16 YVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIR--DSR-----IDDARRLFDMMP---- 64
Y + G + AG +F MPE+NVVSWT ++ GF+R D+R + R L D+ P
Sbjct: 49 YAKCGELRMAGEVFGGMPERNVVSWTALMVGFLRHGDARECLRLLGAMRSLSDVAPNEFT 108
Query: 65 -----------------------------EKDVVAQTNMVLGYCQDGRVDEGREIFDEMP 95
E V ++VL Y + GR+ + R +FD
Sbjct: 109 LSASLKACGVVGDMAAGVWIHGACVRAGFEGHHVVANSLVLLYSKGGRIGDARRVFDGTV 168
Query: 96 KKNVISWTTMISGYVNNNRIDVARKLFEVMPEK---------NEVSWTAMLMGYTQCGRI 146
+N+++W MISGY + + +F M ++ +E ++ ++L G
Sbjct: 169 FRNLVTWNAMISGYAHAGHGRDSLLVFREMQQRRQEEEDHQPDEFTFASLLKACGSLGAA 228
Query: 147 QDAWELFKAMPMKSV-VASNSMILGLGQNGEVQ------KARVVFDQMREKDDATWSGMI 199
++ ++ AM ++ V ASN+++ G + V+ A VF+++ +K+ W+ +I
Sbjct: 229 REGAQVHAAMVIRGVSTASNAILAGALLDMYVKCRCLLPMAMQVFNRLEQKNAIQWTTVI 288
Query: 200 KVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFD 259
+ ++G E ++LF GVR + L SV+ V A A ++ GRQVH V+
Sbjct: 289 VGHAQEGQVKEAMELFGRFWSSGVRADGHVLSSVVGVFADFALVEQGRQVHCYTVKTPAG 348
Query: 260 VDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEM 319
+DV VA+ LI MY KCG + F ++++V W ++I+G ++G G++++ +F EM
Sbjct: 349 LDVSVANSLIDMYHKCGLTDEAARRFREVPARNVVSWTAMINGLGKHGHGQEAIHMFEEM 408
Query: 320 FSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQ 379
+ GV PD+V + +LSACS++G V+E R F +++ + P+ EHYACMVDLLGRAG+
Sbjct: 409 RAEGVEPDEVAYLALLSACSHSGLVEECRRYFSAIRHDRRLRPRAEHYACMVDLLGRAGE 468
Query: 380 VEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNI 439
+ +A L+ MP P +W +LL ACR H + + A + LL ++ N Y++LSNI
Sbjct: 469 LSEAKDLVATMPMAPTVGVWQTLLSACRVHKNVTVGREAGETLLAIDGDNPVNYVMLSNI 528
Query: 440 YASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEK 499
+A G + + +R MR+R + K GCSW+EV K+ H F G SHP I +L
Sbjct: 529 FAEAGDWRECQRVRGAMRRRGLRKQGGCSWVEVGKEAHFFYGGGDDSHPRAADICCVLRD 588
Query: 500 IGGLLREA-GYCPDSSF-----VLHDVDEEEKVHSLRYHSEKLAVAYGLV-----KLPEG 548
+ +RE GY P SS LHDVDEE + SLR HSE+LAV L+ EG
Sbjct: 589 VERTMRERLGYSPGSSSSSSEAALHDVDEESRAESLRAHSERLAVGLWLLLHHDHDHGEG 648
Query: 549 VP-------IRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
+ IRV KNLRVCGDCH K +S V+GR +++RDANRFH F+DG+CSC+DYW
Sbjct: 649 MGGTKRKEVIRVYKNLRVCGDCHEFFKGLSSVVGRVLVVRDANRFHRFEDGVCSCKDYW 707
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 101/396 (25%), Positives = 179/396 (45%), Gaps = 60/396 (15%)
Query: 66 KDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNR-------IDVA 118
D + N++ Y + G + E+F MP++NV+SWT ++ G++ + +
Sbjct: 37 SDTMLGNNLIDMYAKCGELRMAGEVFGGMPERNVVSWTALMVGFLRHGDARECLRLLGAM 96
Query: 119 RKLFEVMPEKNEVSWTAMLMGYTQCGRIQD----AW---ELFKAMPMKSVVASNSMILGL 171
R L +V P NE + +A L CG + D W +A V +NS++L
Sbjct: 97 RSLSDVAP--NEFTLSASL---KACGVVGDMAAGVWIHGACVRAGFEGHHVVANSLVLLY 151
Query: 172 GQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQK-----EGVRVN 226
+ G + AR VFD ++ TW+ MI Y G+ + + +F MQ+ E + +
Sbjct: 152 SKGGRIGDARRVFDGTVFRNLVTWNAMISGYAHAGHGRDSLLVFREMQQRRQEEEDHQPD 211
Query: 227 FPSLISVLSVCASLASLDHGRQVHAQLV--RCQFDVDVYVASVLITMYIKCGELVKGKL- 283
+ S+L C SL + G QVHA +V + +A L+ MY+KC L+ +
Sbjct: 212 EFTFASLLKACGSLGAAREGAQVHAAMVIRGVSTASNAILAGALLDMYVKCRCLLPMAMQ 271
Query: 284 IFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGK 343
+F+ K+ + W ++I G+AQ G ++++++F +SSGV D L V+ +
Sbjct: 272 VFNRLEQKNAIQWTTVIVGHAQEGQVKEAMELFGRFWSSGVRADGHVLSSVVGVFADFAL 331
Query: 344 VKEGREIF---------------ESMKSKY----LVEPKTEHY-----------ACMVDL 373
V++GR++ S+ Y L + + M++
Sbjct: 332 VEQGRQVHCYTVKTPAGLDVSVANSLIDMYHKCGLTDEAARRFREVPARNVVSWTAMING 391
Query: 374 LGRAGQVEDAMKLIEAM---PFEPDAIIWGSLLGAC 406
LG+ G ++A+ + E M EPD + + +LL AC
Sbjct: 392 LGKHGHGQEAIHMFEEMRAEGVEPDEVAYLALLSAC 427
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 85/175 (48%), Gaps = 3/175 (1%)
Query: 230 LISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFA 289
+ +L A+ +++ G Q+H L++ F D + + LI MY KCGEL +F
Sbjct: 7 IADMLRASAASSAIHGGAQLHGALLKLGFGSDTMLGNNLIDMYAKCGELRMAGEVFGGMP 66
Query: 290 SKDIVMWNSIISGYAQYGLGEKSLKVFHEMFS-SGVMPDDVTLVGVLSACSYTGKVKEGR 348
+++V W +++ G+ ++G + L++ M S S V P++ TL L AC G + G
Sbjct: 67 ERNVVSWTALMVGFLRHGDARECLRLLGAMRSLSDVAPNEFTLSASLKACGVVGDMAAGV 126
Query: 349 EIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
I + + E +V L + G++ DA ++ + F + + W +++
Sbjct: 127 WIHGAC-VRAGFEGHHVVANSLVLLYSKGGRIGDARRVFDGTVFR-NLVTWNAMI 179
>gi|224065074|ref|XP_002301657.1| predicted protein [Populus trichocarpa]
gi|222843383|gb|EEE80930.1| predicted protein [Populus trichocarpa]
Length = 504
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 180/418 (43%), Positives = 275/418 (65%)
Query: 183 VFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLAS 242
VFDQM E++ A+W+ +I + ++ E +D+F MQ+EG+ ++ +L ++L +CA + +
Sbjct: 87 VFDQMPERNVASWNSLISGFVKEDKLGEALDVFRRMQREGMGFSWVTLTTILPICARVTA 146
Query: 243 LDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISG 302
L G+++HAQ+V+ DV V + L+ MY+KCG + G+ +FD SKD+ WN++++G
Sbjct: 147 LLSGKEIHAQIVKSARRPDVLVLNSLVDMYVKCGVVDYGRRLFDGMRSKDLTSWNTMLTG 206
Query: 303 YAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEP 362
YA G ++ +F+EM S G+ PDDVT + +LS CS+ G ++G+++F M+ + V P
Sbjct: 207 YAINGYMRVAMDLFNEMASCGIRPDDVTFIALLSGCSHAGLTEDGQKLFHRMEMDFGVSP 266
Query: 363 KTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKL 422
EHYAC+VD+LGRAG+++ A+ +++ MP + IWGSLL +CR H ++ LAE A +L
Sbjct: 267 SLEHYACLVDMLGRAGRIDAALVVVKNMPMKTSGSIWGSLLNSCRLHNEVPLAEAIANRL 326
Query: 423 LQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGR 482
+LEP N G Y++LSNIYA+ G + V +R+ M+ R + K GCSWI+V+ K+H F
Sbjct: 327 FELEPYNPGNYVMLSNIYANAGMWDSVNMVREMMQTRRIRKEAGCSWIQVKNKIHSFVAG 386
Query: 483 DCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGL 542
++ K+ + E GY P++ VLHDV+EE K + HSE+LA + L
Sbjct: 387 GGFEFRNSDEYKKIWNKLREAMEEFGYIPNTDVVLHDVNEETKAMWVCGHSERLATVFSL 446
Query: 543 VKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
+ G+PIR+ KNLRVC DCHS IK++S+V GR I+LRD NRFHHFK+G CSC DYW
Sbjct: 447 IHTAAGMPIRITKNLRVCVDCHSWIKIVSRVTGRVIVLRDTNRFHHFKEGACSCNDYW 504
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 108/225 (48%), Gaps = 32/225 (14%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV-VSW-------------TVMLGG 46
MPERNV SW +++ G+V+E + EA +F +M + + SW T +L G
Sbjct: 91 MPERNVASWNSLISGFVKEDKLGEALDVFRRMQREGMGFSWVTLTTILPICARVTALLSG 150
Query: 47 F-IRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTM 105
I + ARR DV+ ++V Y + G VD GR +FD M K++ SW TM
Sbjct: 151 KEIHAQIVKSARR-------PDVLVLNSLVDMYVKCGVVDYGRRLFDGMRSKDLTSWNTM 203
Query: 106 ISGYVNNNRIDVARKLFEVMPE----KNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSV 161
++GY N + VA LF M ++V++ A+L G + G +D +LF M M
Sbjct: 204 LTGYAINGYMRVAMDLFNEMASCGIRPDDVTFIALLSGCSHAGLTEDGQKLFHRMEMDFG 263
Query: 162 VASN-----SMILGLGQNGEVQKARVVFDQMREKDDAT-WSGMIK 200
V+ + ++ LG+ G + A VV M K + W ++
Sbjct: 264 VSPSLEHYACLVDMLGRAGRIDAALVVVKNMPMKTSGSIWGSLLN 308
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 115/248 (46%), Gaps = 16/248 (6%)
Query: 67 DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMP 126
D V ++ Y Q +E ++FD+MP++NV SW ++ISG+V +++ A +F M
Sbjct: 64 DQVVNNGLLRLYTQCECFNEVLKVFDQMPERNVASWNSLISGFVKEDKLGEALDVFRRMQ 123
Query: 127 -EKNEVSWTAMLMGYTQCGRIQDAW-------ELFKAMPMKSVVASNSMILGLGQNGEVQ 178
E SW + C R+ ++ K+ V+ NS++ + G V
Sbjct: 124 REGMGFSWVTLTTILPICARVTALLSGKEIHAQIVKSARRPDVLVLNSLVDMYVKCGVVD 183
Query: 179 KARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCA 238
R +FD MR KD +W+ M+ Y GY +DLF M G+R + + I++LS C+
Sbjct: 184 YGRRLFDGMRSKDLTSWNTMLTGYAINGYMRVAMDLFNEMASCGIRPDDVTFIALLSGCS 243
Query: 239 SLASLDHGRQVHAQLVRCQFDVDVYVA----SVLITMYIKCGELVKGKLIFDNFASKDI- 293
+ G+++ R + D V + + L+ M + G + ++ N K
Sbjct: 244 HAGLTEDGQKL---FHRMEMDFGVSPSLEHYACLVDMLGRAGRIDAALVVVKNMPMKTSG 300
Query: 294 VMWNSIIS 301
+W S+++
Sbjct: 301 SIWGSLLN 308
>gi|297737088|emb|CBI26289.3| unnamed protein product [Vitis vinifera]
Length = 668
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 220/604 (36%), Positives = 340/604 (56%), Gaps = 48/604 (7%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQM----PEKNVVSWTVMLGGFIRDSRIDDARRL----FD 61
+++RGY G+ EA L+ +M N ++ +L G + + + ++
Sbjct: 100 NSLIRGYSSAGLGREAILLYVRMLVLGVTPNHYTFPFVLSGCTKIAAFCEGIQVHGSVVK 159
Query: 62 MMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKL 121
M E+DV Q ++ Y + G +D G ++F+ M ++NV+SWT++I GY +R A L
Sbjct: 160 MGLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSERNVVSWTSLICGYARGDRPKEAVSL 219
Query: 122 FEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKAR 181
F M N+V A++ Y +CG I A LF +++V N+++ + G ++A
Sbjct: 220 FFEM--LNKVMVNALVDMYMKCGAIDAAKRLFDECVDRNLVLYNTILSNYARQGLAREAL 277
Query: 182 VVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLA 241
+ D+M + +G R + +++S +S A L
Sbjct: 278 AILDEMLQ-------------------------------QGPRPDRVTMLSAISASAQLV 306
Query: 242 SL-----DHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMW 296
L HG VH + + D+ + + L+ M+ +CG+ +F+ +D+ W
Sbjct: 307 DLFYGKVCHGYWVHTYIEKNGIPCDMRLNTALVDMFARCGDPQSAMQVFNKMTERDVSAW 366
Query: 297 NSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKS 356
+ I A G GE + +F++M GV PD V V VL+ACS+ G+V++G IF S+
Sbjct: 367 TAAIGTMAMEGNGEGATGLFNQMLIQGVKPDVVLFVQVLTACSHGGQVEQGLHIF-SLME 425
Query: 357 KYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAE 416
+ + P+ EHY CMVDLLGRAG + +A LI++MP EP+ ++WGSLL ACR H +++A
Sbjct: 426 DHGISPQIEHYGCMVDLLGRAGLLREAFDLIKSMPMEPNDVVWGSLLAACRVHKNVEMAT 485
Query: 417 VAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKV 476
AA+++ +L P+ AG ++LLSNIYAS G++ DVA +R N+R++ V K PG S ++V +
Sbjct: 486 YAAERINELAPQRAGVHVLLSNIYASAGKWTDVARVRLNLREKGVRKVPGSSSVQVNGVI 545
Query: 477 HMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKL 536
H FT D SHPE I ML+++ +AG+ PD S VL DVDE+EK + L HSEKL
Sbjct: 546 HEFTSGD-ESHPEMTHIALMLQEMNCRFSDAGHIPDLSNVLLDVDEQEKEYLLSRHSEKL 604
Query: 537 AVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSC 596
A+A+GL+ +PIRV+KNLR+C DCHS K+ S + REII+RD NRFH F+ GLCSC
Sbjct: 605 AIAFGLIATGRSMPIRVVKNLRMCSDCHSFAKMASIIYNREIIVRDNNRFHFFRQGLCSC 664
Query: 597 RDYW 600
DYW
Sbjct: 665 CDYW 668
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 113/233 (48%), Gaps = 16/233 (6%)
Query: 178 QKARVVFDQMREKDDATW--SGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLS 235
+KA +F + DDA + + +I+ Y G E I L+ M GV N + VLS
Sbjct: 80 RKAFELFKEDVRSDDALFMLNSLIRGYSSAGLGREAILLYVRMLVLGVTPNHYTFPFVLS 139
Query: 236 VCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVM 295
C +A+ G QVH +V+ + DV++ + LI Y +CG + G +F+ + +++V
Sbjct: 140 GCTKIAAFCEGIQVHGSVVKMGLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSERNVVS 199
Query: 296 WNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMK 355
W S+I GYA+ ++++ +F EM + VM + LV + C G + + +F+
Sbjct: 200 WTSLICGYARGDRPKEAVSLFFEMLNK-VMVN--ALVDMYMKC---GAIDAAKRLFDECV 253
Query: 356 SKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFE---PDAIIWGSLLGA 405
+ LV Y ++ R G +A+ +++ M + PD + S + A
Sbjct: 254 DRNLVL-----YNTILSNYARQGLAREALAILDEMLQQGPRPDRVTMLSAISA 301
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 118/263 (44%), Gaps = 21/263 (7%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDM 62
E +V ++ Y E G + +F M E+NVVSWT ++ G+ R R +A LF
Sbjct: 163 EEDVFIQNCLIHFYAECGHMDHGHKVFEGMSERNVVSWTSLICGYARGDRPKEAVSLFFE 222
Query: 63 MPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLF 122
M K +V +V Y + G +D + +FDE +N++ + T++S Y R +AR+
Sbjct: 223 MLNKVMV--NALVDMYMKCGAIDAAKRLFDECVDRNLVLYNTILSNYA---RQGLAREAL 277
Query: 123 EVM-------PEKNEVSWTAMLMGYTQC-----GRIQDAWELFKAMPMKSVVA----SNS 166
++ P + V+ + + Q G++ + + + + + +
Sbjct: 278 AILDEMLQQGPRPDRVTMLSAISASAQLVDLFYGKVCHGYWVHTYIEKNGIPCDMRLNTA 337
Query: 167 MILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVN 226
++ + G+ Q A VF++M E+D + W+ I +G LF M +GV+ +
Sbjct: 338 LVDMFARCGDPQSAMQVFNKMTERDVSAWTAAIGTMAMEGNGEGATGLFNQMLIQGVKPD 397
Query: 227 FPSLISVLSVCASLASLDHGRQV 249
+ VL+ C+ ++ G +
Sbjct: 398 VVLFVQVLTACSHGGQVEQGLHI 420
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 112/240 (46%), Gaps = 19/240 (7%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
M ERNVVSWT+++ GY EA +LF++M K +V+ V + +++ ID A+RLF
Sbjct: 192 MSERNVVSWTSLICGYARGDRPKEAVSLFFEMLNKVMVNALVDM--YMKCGAIDAAKRLF 249
Query: 61 DMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEM----PKKNVISWTTMISGYVNNNRID 116
D ++++V ++ Y + G E I DEM P+ + ++ + IS +
Sbjct: 250 DECVDRNLVLYNTILSNYARQGLAREALAILDEMLQQGPRPDRVTMLSAISASAQLVDLF 309
Query: 117 VARKL----FEVMPEKNEVSW-----TAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSM 167
+ EKN + TA++ + +CG Q A ++F M + V A +
Sbjct: 310 YGKVCHGYWVHTYIEKNGIPCDMRLNTALVDMFARCGDPQSAMQVFNKMTERDVSAWTAA 369
Query: 168 ILGLGQNGEVQKARVVFDQMR----EKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGV 223
I + G + A +F+QM + D + ++ G + + +F+LM+ G+
Sbjct: 370 IGTMAMEGNGEGATGLFNQMLIQGVKPDVVLFVQVLTACSHGGQVEQGLHIFSLMEDHGI 429
>gi|15234095|ref|NP_195043.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206840|sp|Q9SMZ2.1|PP347_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g33170
gi|4455331|emb|CAB36791.1| putative protein [Arabidopsis thaliana]
gi|7270265|emb|CAB80034.1| putative protein [Arabidopsis thaliana]
gi|332660786|gb|AEE86186.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 990
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 219/618 (35%), Positives = 353/618 (57%), Gaps = 21/618 (3%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM------PEKNVVSWTVMLGGFIRDSRID 54
M ER+++SW +++ G + G+ EA LF Q+ P++ ++ +V+ +
Sbjct: 376 MSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMT-SVLKAASSLPEGLS 434
Query: 55 DARRL----FDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYV 110
++++ + D T ++ Y ++ + E EI E ++++W M++GY
Sbjct: 435 LSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEA-EILFERHNFDLVAWNAMMAGYT 493
Query: 111 NNNRIDVARKLFEVMPEKNEVSWTAMLMG-YTQCGRI--QDAWELFKAMPMKS-----VV 162
++ KLF +M ++ E S L + CG + + + A +KS +
Sbjct: 494 QSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLW 553
Query: 163 ASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEG 222
S+ ++ + G++ A+ FD + DD W+ MI G E +F+ M+ G
Sbjct: 554 VSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMG 613
Query: 223 VRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGK 282
V + ++ ++ + L +L+ GRQ+HA ++ D +V + L+ MY KCG +
Sbjct: 614 VLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAY 673
Query: 283 LIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTG 342
+F +I WN+++ G AQ+G G+++L++F +M S G+ PD VT +GVLSACS++G
Sbjct: 674 CLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSG 733
Query: 343 KVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSL 402
V E + SM Y ++P+ EHY+C+ D LGRAG V+ A LIE+M E A ++ +L
Sbjct: 734 LVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTL 793
Query: 403 LGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVI 462
L ACR + + A KLL+LEP ++ Y+LLSN+YA+ ++ ++ R M+ V
Sbjct: 794 LAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVK 853
Query: 463 KPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDE 522
K PG SWIEV+ K+H+F D S+ + +I R ++ + +++ GY P++ F L DV+E
Sbjct: 854 KDPGFSWIEVKNKIHIFVVDD-RSNRQTELIYRKVKDMIRDIKQEGYVPETDFTLVDVEE 912
Query: 523 EEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRD 582
EEK +L YHSEKLAVA+GL+ P PIRV+KNLRVCGDCH+A+K I+KV REI+LRD
Sbjct: 913 EEKERALYYHSEKLAVAFGLLSTPPSTPIRVIKNLRVCGDCHNAMKYIAKVYNREIVLRD 972
Query: 583 ANRFHHFKDGLCSCRDYW 600
ANRFH FKDG+CSC DYW
Sbjct: 973 ANRFHRFKDGICSCGDYW 990
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 108/434 (24%), Positives = 200/434 (46%), Gaps = 35/434 (8%)
Query: 2 PERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDS-----RIDDA 56
PER +++ ++ Y + G +T A +F +MP++++VSW +L + + S I A
Sbjct: 72 PERFLIN--NLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQA 129
Query: 57 RRLFDMMPEKDVVAQTNMVLG----YCQDGRVDEGREIFDEMPKKNVISWTTMISG---- 108
LF ++ +DVV + M L C E F K + ++G
Sbjct: 130 FLLFRIL-RQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVN 188
Query: 109 -YVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSM 167
Y+ ++ + LFE MP ++ V W ML Y + G ++A +L A S + N +
Sbjct: 189 IYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFH-SSGLNPNEI 247
Query: 168 ILGLGQ--NGEVQKARVVFDQMREKDDATWSGMI------KVYERKGYELEVIDLFTLMQ 219
L L +G+ A V D ++ S +I Y G ++ F M
Sbjct: 248 TLRLLARISGDDSDAGQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMV 307
Query: 220 KEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELV 279
+ V + + I +L+ + SL G+QVH ++ D+ + V++ LI MY K +
Sbjct: 308 ESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFG 367
Query: 280 KGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACS 339
+ +FDN + +D++ WNS+I+G AQ GL +++ +F ++ G+ PD T+ VL A S
Sbjct: 368 FARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAAS 427
Query: 340 YTGKVKEGREIFESMKSKYL-VEPKTEHY--ACMVDLLGRAGQVEDAMKLIEAMPFEPDA 396
+ EG + + + + + ++ + ++D R +++A L E F D
Sbjct: 428 ---SLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFERHNF--DL 482
Query: 397 IIWGSLL-GACRTH 409
+ W +++ G ++H
Sbjct: 483 VAWNAMMAGYTQSH 496
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 83/165 (50%), Gaps = 7/165 (4%)
Query: 246 GRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQ 305
G+ HA+++ + + + ++ + LI+MY KCG L + +FD +D+V WNSI++ YAQ
Sbjct: 58 GKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQ 117
Query: 306 YGLG-----EKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLV 360
+++ +F + V +TL +L C ++G V E F K +
Sbjct: 118 SSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYV-WASESFHGYACKIGL 176
Query: 361 EPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
+ +V++ + G+V++ L E MP+ D ++W +L A
Sbjct: 177 DGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYR-DVVLWNLMLKA 220
>gi|356570245|ref|XP_003553300.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g26782, mitochondrial-like [Glycine max]
Length = 555
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 210/533 (39%), Positives = 320/533 (60%), Gaps = 24/533 (4%)
Query: 85 DEGREIFDEMPKKNVISWTTMISGYVNNNRI-DVARKLFEVMPEK-------NEVSWTAM 136
++ R +FDE+P ++V+SWT++I+G V N+R D R E++ E+ + V ++
Sbjct: 30 NDSRHLFDEIPDRSVVSWTSIIAGCVQNDRARDAVRVFKELLVEESGSVESEDGVFVDSV 89
Query: 137 LMGYTQCGRIQDAWE---------LFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQM 187
L+G + W + K + V N+++ + GE+ A+V FD M
Sbjct: 90 LLGCVVSAFSKLGWRGVTEGVHGLVIKRGFERCVGVGNTLMDAYAKFGEMGVAKV-FDGM 148
Query: 188 REKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGR 247
E D W+ +I Y + G E +F M K G NF ++ S +L G+
Sbjct: 149 NESDHYFWNSVIAEYAQNGLSAEAFSVFGDMVKSG---NFRYNAVIMDXGLS-GALQLGK 204
Query: 248 QVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYG 307
+H Q+++ + V+V + ++ +Y KC + + FD K++ W ++++GY +G
Sbjct: 205 CIHHQVIKMDLEDSVFVGTSIVDIYCKCERVEMARKAFDCMKVKNVKSWTAMVAGYGMHG 264
Query: 308 LGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHY 367
++++++F++M SGV P+ +T V VL+ACS+ G +KEG F MK +++VEP EHY
Sbjct: 265 RAKEAMEIFYKMIRSGVKPNYITFVSVLAACSHAGMLKEGXHWFNRMKCEFIVEPGIEHY 324
Query: 368 ACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEP 427
CMVDLLGRAG + LI+ M +PD IIWGSLLGACR H ++L E++A+KL +L+
Sbjct: 325 LCMVDLLGRAGYLX-CYGLIKEMNAKPDFIIWGSLLGACRIHKNVELGEISARKLFELDX 383
Query: 428 KNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSH 487
N G Y+LLSNIYA GR+ +V +R M+ R ++K PG S +E++ ++H+ D H
Sbjct: 384 SNCGYYVLLSNIYADAGRWDEVERMRILMKSRGLLKAPGFSIVELKGRIHVLLVGD-KEH 442
Query: 488 PEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPE 547
P+H I L+K L+E GY P+ + VLHDVDEEEK LR HSEKLAVA+G++
Sbjct: 443 PQHEKIYEYLDKXNVKLQELGYMPNXNMVLHDVDEEEKGMVLRVHSEKLAVAFGIMNSVP 502
Query: 548 GVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
G I ++KNLR+CGDC+ IKLI KV+ REI++RD+ RFHHFK+G CSC DYW
Sbjct: 503 GSIIHIIKNLRICGDCNVVIKLIFKVVNREIVVRDSKRFHHFKEGSCSCGDYW 555
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 79/376 (21%), Positives = 153/376 (40%), Gaps = 90/376 (23%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM---------PEKNVVSWTVMLG------ 45
+P+R+VVSWT+++ G V+ +A +F ++ E V +V+LG
Sbjct: 39 IPDRSVVSWTSIIAGCVQNDRARDAVRVFKELLVEESGSVESEDGVFVDSVLLGCVVSAF 98
Query: 46 -------------------GFIR----DSRIDDA---------RRLFDMMPEKDVVAQTN 73
GF R + + DA ++FD M E D +
Sbjct: 99 SKLGWRGVTEGVHGLVIKRGFERCVGVGNTLMDAYAKFGEMGVAKVFDGMNESDHYFWNS 158
Query: 74 MVLGYCQDGRVDEGREIFDEMPKKNVISWTTMI-----SGYVNNNRIDVARKLFEVMPEK 128
++ Y Q+G E +F +M K + +I SG + + + ++ ++ E
Sbjct: 159 VIAEYAQNGLSAEAFSVFGDMVKSGNFRYNAVIMDXGLSGALQLGKC-IHHQVIKMDLED 217
Query: 129 NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMR 188
+ T+++ Y +C R++ A + F M +K+V + +M+ G G +G ++A +F +M
Sbjct: 218 SVFVGTSIVDIYCKCERVEMARKAFDCMKVKNVKSWTAMVAGYGMHGRAKEAMEIFYKM- 276
Query: 189 EKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQ 248
+ GV+ N+ + +SVL+ C+ L G
Sbjct: 277 ------------------------------IRSGVKPNYITFVSVLAACSHAGMLKEGXH 306
Query: 249 VHAQLVRCQFDVDVYVASVL--ITMYIKCGELVKGKLIFDNFASKDIVMWNSIISG---Y 303
++ +C+F V+ + L + + + G L LI + A D ++W S++ +
Sbjct: 307 WFNRM-KCEFIVEPGIEHYLCMVDLLGRAGYLXCYGLIKEMNAKPDFIIWGSLLGACRIH 365
Query: 304 AQYGLGEKSLKVFHEM 319
LGE S + E+
Sbjct: 366 KNVELGEISARKLFEL 381
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 105/250 (42%), Gaps = 22/250 (8%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRL- 59
M E + W +++ Y + G+ EA ++F M V S I D + A +L
Sbjct: 148 MNESDHYFWNSVIAEYAQNGLSAEAFSVFGDM----VKSGNFRYNAVIMDXGLSGALQLG 203
Query: 60 -------FDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
M E V T++V YC+ RV+ R+ FD M KNV SWT M++GY +
Sbjct: 204 KCIHHQVIKMDLEDSVFVGTSIVDIYCKCERVEMARKAFDCMKVKNVKSWTAMVAGYGMH 263
Query: 113 NRIDVARKLFEVM----PEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASN--- 165
R A ++F M + N +++ ++L + G +++ F M + +V
Sbjct: 264 GRAKEAMEIFYKMIRSGVKPNYITFVSVLAACSHAGMLKEGXHWFNRMKCEFIVEPGIEH 323
Query: 166 --SMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYE-RKGYELEVIDLFTLMQKEG 222
M+ LG+ G + ++ + + D W ++ K EL I L + +
Sbjct: 324 YLCMVDLLGRAGYLXCYGLIKEMNAKPDFIIWGSLLGACRIHKNVELGEISARKLFELDX 383
Query: 223 VRVNFPSLIS 232
+ L+S
Sbjct: 384 SNCGYYVLLS 393
>gi|359493563|ref|XP_002269754.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g71420-like [Vitis vinifera]
Length = 741
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 226/657 (34%), Positives = 354/657 (53%), Gaps = 75/657 (11%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMM- 63
N+ +V Y + G + A +F +MPEKN+VSWT ++ G+ + R ++ R+F M
Sbjct: 99 NLFLTNHVVNMYAKCGSLDYAHQMFDEMPEKNIVSWTALVSGYAQHGRSNECFRVFRGML 158
Query: 64 ----PEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRI---- 115
P + A G G + GR++ K + S YV N I
Sbjct: 159 IWHQPTEFAFASVISACG----GDDNCGRQVHALALKTSFDSCV-----YVGNALIMMYC 209
Query: 116 ------DVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPM-------KSVV 162
D A ++E M +N VSW +M+ G+ CG A ELF M + ++V
Sbjct: 210 KSCGGADEAWNVYEAMGFRNLVSWNSMIAGFQVCGCGNRALELFSQMHVGGIRFDRATLV 269
Query: 163 ASNSMILGLGQ----------------------------------NGEVQKARVVFDQMR 188
+ S + G+G GEV +F ++
Sbjct: 270 SIFSCLCGMGDGLECCFQLQCLTIKTGFILKIEVATALVKAYSSLGGEVSDCYRIFLELD 329
Query: 189 EKDD-ATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGR 247
+ D +W+G+I + + + ++ +F +E + + VL CA LA+ H
Sbjct: 330 GRQDVVSWTGIIAAFAERDPKKALV-IFRQFLRECLAPDRHMFSIVLKACAGLATERHAL 388
Query: 248 QVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYG 307
V + +++ F+ D+ +A+ LI +CG + K +FD S+D V WNS++ YA +G
Sbjct: 389 TVQSHVLKVGFEDDIVLANALIHACARCGSVALSKQVFDKMGSRDTVSWNSMLKAYAMHG 448
Query: 308 LGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHY 367
G+++L +F +M PD T V +LSACS+ G +EG +IFE+M + + + P+ +HY
Sbjct: 449 QGKEALLLFSQM---DAQPDGATFVALLSACSHAGMAEEGAKIFETMSNNHGIVPQLDHY 505
Query: 368 ACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEP 427
ACMVD+LGRAGQ+ +A +LI+ MP EPD+++W +LLG+CR H + LA++AA KL +L+P
Sbjct: 506 ACMVDILGRAGQISEAKELIDKMPMEPDSVVWSALLGSCRKHGETKLAKLAAVKLKELDP 565
Query: 428 KNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSH 487
N+ Y+L+SNI+ + GRF++ +R+ M + V K PG SWIEV +VH F H
Sbjct: 566 NNSLGYVLMSNIFCTDGRFNEARLIRREMEGKIVRKEPGLSWIEVGNQVHEFASGG-QQH 624
Query: 488 PEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLP- 546
PE I LE++ L++ GY P S LHD+++E K L YHSEKLA+A+ L+ +
Sbjct: 625 PEKEAICARLEELVRRLKDLGYVPQISLALHDIEDEHKEEQLYYHSEKLALAFALMNVGS 684
Query: 547 ---EGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
G I++MKN+R+C DCH+ +KL S+++ EI++RD+NRFHHFK +CSC DYW
Sbjct: 685 ICCSGNTIKIMKNIRICVDCHNFMKLASELVDMEIVVRDSNRFHHFKAKVCSCNDYW 741
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 101/219 (46%), Gaps = 25/219 (11%)
Query: 199 IKVYERKGYELEVIDLF-TLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLV--R 255
I++ +G+ E + LF ++ + + + ++ CA +SL G+ +H +
Sbjct: 34 IRLLCSRGHLQEALKLFYSITPPPPLVHSHHTYAALFQACARRSSLPEGQALHRHMFLHN 93
Query: 256 CQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKV 315
D ++++ + ++ MY KCG L +FD K+IV W +++SGYAQ+G + +V
Sbjct: 94 PNSDFNLFLTNHVVNMYAKCGSLDYAHQMFDEMPEKNIVSWTALVSGYAQHGRSNECFRV 153
Query: 316 FHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLG 375
F M P + V+SAC G GR++ + + KT +C+ +G
Sbjct: 154 FRGMLIWH-QPTEFAFASVISACG--GDDNCGRQV-------HALALKTSFDSCVY--VG 201
Query: 376 RA---------GQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
A G ++A + EAM F + + W S++
Sbjct: 202 NALIMMYCKSCGGADEAWNVYEAMGFR-NLVSWNSMIAG 239
>gi|225464414|ref|XP_002269452.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Vitis vinifera]
Length = 594
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 214/542 (39%), Positives = 326/542 (60%), Gaps = 18/542 (3%)
Query: 72 TNMVLG-YCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNE 130
+NM++ Y + G V+ R++FDEMP ++++SW TM+ + N + A LF M +K
Sbjct: 58 SNMLMNMYSKCGLVESARKLFDEMPVRSLVSWNTMVGSHTQNGDCEKALVLFMQM-QKEG 116
Query: 131 VSWTAMLMGYTQCGRIQDAW----ELFKAMPMKSVVASN-----SMILGLGQNGEVQKAR 181
S + + C + +K+ + SN +++ + G V+ A
Sbjct: 117 TSCSEFTVSSVVCACAAKCCVFECKQLHGFALKTALDSNVFVGTALLDVYAKCGLVKDAN 176
Query: 182 VVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLA 241
+VF+ M E+ D TWS M+ Y + E + LF Q G+ N ++ S LS CA+ A
Sbjct: 177 LVFECMPERSDVTWSSMVAGYVQNELYEEALVLFHRAQAMGLEHNQFTISSALSACAARA 236
Query: 242 SLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIIS 301
+L G+QV A + +++V S LI MY KCG + + +F + K++V+WN+I+S
Sbjct: 237 ALIEGKQVQAVSCKTGIGSNIFVISSLIDMYAKCGIIEEAYTVFSSVEEKNVVLWNAILS 296
Query: 302 GYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVE 361
G++++ +++ F +M G+ P+D+T + VLSACS+ G V++GR+ F+ M + V
Sbjct: 297 GFSRHVRSLEAMIYFEKMQQMGICPNDITYISVLSACSHLGLVEKGRKYFDLMIRVHNVS 356
Query: 362 PKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKK 421
P HY+CMVD+LGRAG + +A I+ MPF+ A +WGSLL +CR + L+LAEVAAK
Sbjct: 357 PNVLHYSCMVDILGRAGLLHEAKDFIDRMPFDATASMWGSLLASCRIYRNLELAEVAAKH 416
Query: 422 LLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTG 481
L ++EP NAG ++LLSNIYA+ R+ +VA R +++ K G SWIE++ KVH F
Sbjct: 417 LFEIEPHNAGNHVLLSNIYAANDRWEEVARARNLLKESKAKKERGKSWIEIKHKVHSFM- 475
Query: 482 RDCVSHPEHPMIMRM---LEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAV 538
V HP I+ + LE + G +++ GY + LHDV+E K LR+HSEKLA+
Sbjct: 476 ---VGERNHPRIVEIYLKLEDLVGEMKKIGYKAKTEHDLHDVEESRKQELLRHHSEKLAL 532
Query: 539 AYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRD 598
+G++ LP G PIR+MKNLR+CGDCHS +KL S + REII+RD NRFHHFK+G CSC +
Sbjct: 533 TFGIMVLPHGAPIRIMKNLRICGDCHSFMKLASSITEREIIVRDTNRFHHFKNGYCSCGE 592
Query: 599 YW 600
+W
Sbjct: 593 FW 594
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 94/409 (22%), Positives = 175/409 (42%), Gaps = 61/409 (14%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMP 64
+ ++ ++ Y + G++ A LF +MP +++VSW M+G ++ + A LF M
Sbjct: 54 DTITSNMLMNMYSKCGLVESARKLFDEMPVRSLVSWNTMVGSHTQNGDCEKALVLFMQMQ 113
Query: 65 EKDVVAQ----TNMVLGYCQDGRVDEGREIFDEMPK----KNVISWTTMISGYVNNNRID 116
++ +++V V E +++ K NV T ++ Y +
Sbjct: 114 KEGTSCSEFTVSSVVCACAAKCCVFECKQLHGFALKTALDSNVFVGTALLDVYAKCGLVK 173
Query: 117 VARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELF----------------------- 153
A +FE MPE+++V+W++M+ GY Q ++A LF
Sbjct: 174 DANLVFECMPERSDVTWSSMVAGYVQNELYEEALVLFHRAQAMGLEHNQFTISSALSACA 233
Query: 154 -----------KAMPMKSVVASN-----SMILGLGQNGEVQKARVVFDQMREKDDATWSG 197
+A+ K+ + SN S+I + G +++A VF + EK+ W+
Sbjct: 234 ARAALIEGKQVQAVSCKTGIGSNIFVISSLIDMYAKCGIIEEAYTVFSSVEEKNVVLWNA 293
Query: 198 MIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQ 257
++ + R LE + F MQ+ G+ N + ISVLS C+ L ++ GR+ ++R
Sbjct: 294 ILSGFSRHVRSLEAMIYFEKMQQMGICPNDITYISVLSACSHLGLVEKGRKYFDLMIRVH 353
Query: 258 -FDVDVYVASVLITMYIKCGELVKGK-----LIFDNFASKDIVMWNSIISG---YAQYGL 308
+V S ++ + + G L + K + FD AS MW S+++ Y L
Sbjct: 354 NVSPNVLHYSCMVDILGRAGLLHEAKDFIDRMPFDATAS----MWGSLLASCRIYRNLEL 409
Query: 309 GEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSK 357
E + K E+ + V L + +A +V R + + K+K
Sbjct: 410 AEVAAKHLFEIEPHNA-GNHVLLSNIYAANDRWEEVARARNLLKESKAK 457
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 88/184 (47%), Gaps = 3/184 (1%)
Query: 222 GVRVNFPS-LISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVK 280
G+R S L +L A + G HAQ++R D +++L+ MY KCG +
Sbjct: 14 GIRATHVSELQHLLQSSARNRAAIEGMACHAQIIRVGLRADTITSNMLMNMYSKCGLVES 73
Query: 281 GKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSY 340
+ +FD + +V WN+++ + Q G EK+L +F +M G + T+ V+ AC+
Sbjct: 74 ARKLFDEMPVRSLVSWNTMVGSHTQNGDCEKALVLFMQMQKEGTSCSEFTVSSVVCACAA 133
Query: 341 TGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWG 400
V E +++ K ++ ++D+ + G V+DA + E MP D + W
Sbjct: 134 KCCVFECKQL-HGFALKTALDSNVFVGTALLDVYAKCGLVKDANLVFECMPERSD-VTWS 191
Query: 401 SLLG 404
S++
Sbjct: 192 SMVA 195
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 113/247 (45%), Gaps = 17/247 (6%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFD- 61
+ NV TA++ Y + G++ +A +F MPE++ V+W+ M+ G++++ ++A LF
Sbjct: 153 DSNVFVGTALLDVYAKCGLVKDANLVFECMPERSDVTWSSMVAGYVQNELYEEALVLFHR 212
Query: 62 ---MMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPK----KNVISWTTMISGYVNNNR 114
M E + ++ + + EG+++ K N+ +++I Y
Sbjct: 213 AQAMGLEHNQFTISSALSACAARAALIEGKQVQAVSCKTGIGSNIFVISSLIDMYAKCGI 272
Query: 115 IDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASN----SMILG 170
I+ A +F + EKN V W A+L G+++ R +A F+ M + ++ S++
Sbjct: 273 IEEAYTVFSSVEEKNVVLWNAILSGFSRHVRSLEAMIYFEKMQQMGICPNDITYISVLSA 332
Query: 171 LGQNGEVQKARVVFDQMREKDDAT-----WSGMIKVYERKGYELEVIDLFTLMQKEGVRV 225
G V+K R FD M + + +S M+ + R G E D M +
Sbjct: 333 CSHLGLVEKGRKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEAKDFIDRMPFDATAS 392
Query: 226 NFPSLIS 232
+ SL++
Sbjct: 393 MWGSLLA 399
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 103/213 (48%), Gaps = 19/213 (8%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMP----EKNVVSWTVMLGGFIRDSRIDDA 56
MPER+ V+W++MV GYV+ + EA LF + E N + + L + + +
Sbjct: 182 MPERSDVTWSSMVAGYVQNELYEEALVLFHRAQAMGLEHNQFTISSALSACAARAALIEG 241
Query: 57 RRLFDMMPE----KDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+++ + + ++ ++++ Y + G ++E +F + +KNV+ W ++SG+ +
Sbjct: 242 KQVQAVSCKTGIGSNIFVISSLIDMYAKCGIIEEAYTVFSSVEEKNVVLWNAILSGFSRH 301
Query: 113 NRIDVARKLFEVMPE----KNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASN--- 165
R A FE M + N++++ ++L + G ++ + F M V+ N
Sbjct: 302 VRSLEAMIYFEKMQQMGICPNDITYISVLSACSHLGLVEKGRKYFDLMIRVHNVSPNVLH 361
Query: 166 --SMILGLGQNGEVQKARVVFDQMREKDDATWS 196
M+ LG+ G + +A+ D+M DAT S
Sbjct: 362 YSCMVDILGRAGLLHEAKDFIDRM--PFDATAS 392
>gi|297807343|ref|XP_002871555.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317392|gb|EFH47814.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 822
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 217/617 (35%), Positives = 349/617 (56%), Gaps = 24/617 (3%)
Query: 4 RNVVSWTAMVRGYVEEGMITEAGTLFWQM------PEK----NVVSWTVMLGGFIRDSRI 53
+++V W +V YVE G ++ L +M P + ++ LG F +
Sbjct: 210 KDIVVWAGIVSCYVENGCFEDSLQLLSRMGMDGFMPNNYTFDTALKASIGLGAFHFAKSV 269
Query: 54 DDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNN 113
++ E D ++ Y Q G + + ++F+EMPK +V+ W+ MI+ + N
Sbjct: 270 HG--QILKTCYELDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNG 327
Query: 114 RIDVARKLFEVMPE----KNEVSWTAMLMGYTQCGRIQDAWELFKAMPMK-----SVVAS 164
+ A +F M E NE + +++L G G+ E + +K V S
Sbjct: 328 FCNKAVDIFIRMREGFVVPNEFTLSSILNG-CAIGKCSGLGEQLHGLVVKVGFDLDVYVS 386
Query: 165 NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVR 224
N++I + ++ A +F ++ K+ +W+ +I YE G + +++F + V
Sbjct: 387 NALIDVYAKCEKMDTAVKLFAELSSKNVVSWNTVIVGYENLGEGGKALNMFREALRNQVS 446
Query: 225 VNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLI 284
V + S L CASLAS++ G QVH ++ V V++ LI MY KCG++ + +
Sbjct: 447 VTEVTFSSALGACASLASMELGVQVHGLAIKTNNAKRVAVSNSLIDMYAKCGDIKVAQTV 506
Query: 285 FDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKV 344
F+ + D+ WN++ISGY+ +GLG ++L++F M S P+ +T +GVLS CS G +
Sbjct: 507 FNEMETIDVASWNALISGYSTHGLGRQALRIFDIMKGSDCKPNGLTFLGVLSGCSNAGLI 566
Query: 345 KEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLG 404
+G++ FESM + +EP EHY CMV L GR+GQ++ AM LIE +P+EP +IW ++L
Sbjct: 567 DQGQDCFESMICDHGIEPCLEHYTCMVRLFGRSGQLDKAMNLIEGIPYEPSVMIWRAMLS 626
Query: 405 ACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKP 464
A + A +A+++L++ PK+ Y+LLSN+YA ++ +VA +RK+M+++ V K
Sbjct: 627 ASMNQYNEEFARRSAEEILKINPKDEATYVLLSNMYAGAKQWANVASIRKSMKEKGVKKE 686
Query: 465 PGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEE 524
PG SWIE + VH F+ HP+ +I MLE + AGY PD + VL D+D+EE
Sbjct: 687 PGLSWIEHQGDVHFFS-VGSSDHPDMKLINGMLEWLNMKATRAGYVPDRNAVLLDMDDEE 745
Query: 525 KVHSLRYHSEKLAVAYGLVKLPEGVP-IRVMKNLRVCGDCHSAIKLISKVMGREIILRDA 583
K L HSE+LA+AYGLV++P I +MKNLR+C DCHSA+K+IS ++ R++++RD
Sbjct: 746 KDKRLWVHSERLALAYGLVRMPSSRNRILIMKNLRICSDCHSAMKVISSIVQRDLVIRDM 805
Query: 584 NRFHHFKDGLCSCRDYW 600
NRFHHF G+CSC D+W
Sbjct: 806 NRFHHFHAGVCSCDDHW 822
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 111/448 (24%), Positives = 193/448 (43%), Gaps = 76/448 (16%)
Query: 36 NVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGY-CQD-----GRVD-EGR 88
++ + ++L +++ DA LFD MPE++ V+ + GY CQD R+ EG
Sbjct: 83 DLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSYVTLTQGYACQDPVGLYSRLHREGH 142
Query: 89 E-----------IFDEMPKKNVISW-----------------TTMISGYVNNNRIDVARK 120
E +F + K + W +I+ Y +D AR
Sbjct: 143 ELNPHVFTSFLKLFVSLDKAEICWWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARS 202
Query: 121 LFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMI-------LGLG- 172
+FE + K+ V W ++ Y + G +D+ +L M M + +N +GLG
Sbjct: 203 VFEGILCKDIVVWAGIVSCYVENGCFEDSLQLLSRMGMDGFMPNNYTFDTALKASIGLGA 262
Query: 173 -------------------------------QNGEVQKARVVFDQMREKDDATWSGMIKV 201
Q G++ A VF++M + D WS MI
Sbjct: 263 FHFAKSVHGQILKTCYELDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIAR 322
Query: 202 YERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVD 261
+ + G+ + +D+F M++ V N +L S+L+ CA G Q+H +V+ FD+D
Sbjct: 323 FCQNGFCNKAVDIFIRMREGFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLD 382
Query: 262 VYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFS 321
VYV++ LI +Y KC ++ +F +SK++V WN++I GY G G K+L +F E
Sbjct: 383 VYVSNALIDVYAKCEKMDTAVKLFAELSSKNVVSWNTVIVGYENLGEGGKALNMFREALR 442
Query: 322 SGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVE 381
+ V +VT L AC+ ++ G ++ + K + ++D+ + G ++
Sbjct: 443 NQVSVTEVTFSSALGACASLASMELGVQV-HGLAIKTNNAKRVAVSNSLIDMYAKCGDIK 501
Query: 382 DAMKLIEAMPFEPDAIIWGSLLGACRTH 409
A + M D W +L+ TH
Sbjct: 502 VAQTVFNEME-TIDVASWNALISGYSTH 528
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/321 (22%), Positives = 147/321 (45%), Gaps = 20/321 (6%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MP+ +VV W+ M+ + + G +A +F +M E VV L + I L
Sbjct: 308 MPKNDVVPWSFMIARFCQNGFCNKAVDIFIRMREGFVVPNEFTLSSILNGCAIGKCSGLG 367
Query: 61 DMMP--------EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVN- 111
+ + + DV ++ Y + ++D ++F E+ KNV+SW T+I GY N
Sbjct: 368 EQLHGLVVKVGFDLDVYVSNALIDVYAKCEKMDTAVKLFAELSSKNVVSWNTVIVGYENL 427
Query: 112 ---NNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWEL----FKAMPMKSVVAS 164
+++ R+ EV++++ L ++ ++ K K V S
Sbjct: 428 GEGGKALNMFREALRNQVSVTEVTFSSALGACASLASMELGVQVHGLAIKTNNAKRVAVS 487
Query: 165 NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVR 224
NS+I + G+++ A+ VF++M D A+W+ +I Y G + + +F +M+ +
Sbjct: 488 NSLIDMYAKCGDIKVAQTVFNEMETIDVASWNALISGYSTHGLGRQALRIFDIMKGSDCK 547
Query: 225 VNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVA--SVLITMYIKCGELVKGK 282
N + + VLS C++ +D G+ ++ C ++ + + ++ ++ + G+L K
Sbjct: 548 PNGLTFLGVLSGCSNAGLIDQGQDCFESMI-CDHGIEPCLEHYTCMVRLFGRSGQLDKAM 606
Query: 283 LIFDNFASKDIVM-WNSIISG 302
+ + + VM W +++S
Sbjct: 607 NLIEGIPYEPSVMIWRAMLSA 627
>gi|296084465|emb|CBI25024.3| unnamed protein product [Vitis vinifera]
Length = 621
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 214/542 (39%), Positives = 326/542 (60%), Gaps = 18/542 (3%)
Query: 72 TNMVLG-YCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNE 130
+NM++ Y + G V+ R++FDEMP ++++SW TM+ + N + A LF M +K
Sbjct: 85 SNMLMNMYSKCGLVESARKLFDEMPVRSLVSWNTMVGSHTQNGDCEKALVLFMQM-QKEG 143
Query: 131 VSWTAMLMGYTQCGRIQDAW----ELFKAMPMKSVVASN-----SMILGLGQNGEVQKAR 181
S + + C + +K+ + SN +++ + G V+ A
Sbjct: 144 TSCSEFTVSSVVCACAAKCCVFECKQLHGFALKTALDSNVFVGTALLDVYAKCGLVKDAN 203
Query: 182 VVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLA 241
+VF+ M E+ D TWS M+ Y + E + LF Q G+ N ++ S LS CA+ A
Sbjct: 204 LVFECMPERSDVTWSSMVAGYVQNELYEEALVLFHRAQAMGLEHNQFTISSALSACAARA 263
Query: 242 SLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIIS 301
+L G+QV A + +++V S LI MY KCG + + +F + K++V+WN+I+S
Sbjct: 264 ALIEGKQVQAVSCKTGIGSNIFVISSLIDMYAKCGIIEEAYTVFSSVEEKNVVLWNAILS 323
Query: 302 GYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVE 361
G++++ +++ F +M G+ P+D+T + VLSACS+ G V++GR+ F+ M + V
Sbjct: 324 GFSRHVRSLEAMIYFEKMQQMGICPNDITYISVLSACSHLGLVEKGRKYFDLMIRVHNVS 383
Query: 362 PKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKK 421
P HY+CMVD+LGRAG + +A I+ MPF+ A +WGSLL +CR + L+LAEVAAK
Sbjct: 384 PNVLHYSCMVDILGRAGLLHEAKDFIDRMPFDATASMWGSLLASCRIYRNLELAEVAAKH 443
Query: 422 LLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTG 481
L ++EP NAG ++LLSNIYA+ R+ +VA R +++ K G SWIE++ KVH F
Sbjct: 444 LFEIEPHNAGNHVLLSNIYAANDRWEEVARARNLLKESKAKKERGKSWIEIKHKVHSFM- 502
Query: 482 RDCVSHPEHPMIMRM---LEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAV 538
V HP I+ + LE + G +++ GY + LHDV+E K LR+HSEKLA+
Sbjct: 503 ---VGERNHPRIVEIYLKLEDLVGEMKKIGYKAKTEHDLHDVEESRKQELLRHHSEKLAL 559
Query: 539 AYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRD 598
+G++ LP G PIR+MKNLR+CGDCHS +KL S + REII+RD NRFHHFK+G CSC +
Sbjct: 560 TFGIMVLPHGAPIRIMKNLRICGDCHSFMKLASSITEREIIVRDTNRFHHFKNGYCSCGE 619
Query: 599 YW 600
+W
Sbjct: 620 FW 621
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 94/409 (22%), Positives = 175/409 (42%), Gaps = 61/409 (14%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMP 64
+ ++ ++ Y + G++ A LF +MP +++VSW M+G ++ + A LF M
Sbjct: 81 DTITSNMLMNMYSKCGLVESARKLFDEMPVRSLVSWNTMVGSHTQNGDCEKALVLFMQMQ 140
Query: 65 EKDVVAQ----TNMVLGYCQDGRVDEGREIFDEMPK----KNVISWTTMISGYVNNNRID 116
++ +++V V E +++ K NV T ++ Y +
Sbjct: 141 KEGTSCSEFTVSSVVCACAAKCCVFECKQLHGFALKTALDSNVFVGTALLDVYAKCGLVK 200
Query: 117 VARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELF----------------------- 153
A +FE MPE+++V+W++M+ GY Q ++A LF
Sbjct: 201 DANLVFECMPERSDVTWSSMVAGYVQNELYEEALVLFHRAQAMGLEHNQFTISSALSACA 260
Query: 154 -----------KAMPMKSVVASN-----SMILGLGQNGEVQKARVVFDQMREKDDATWSG 197
+A+ K+ + SN S+I + G +++A VF + EK+ W+
Sbjct: 261 ARAALIEGKQVQAVSCKTGIGSNIFVISSLIDMYAKCGIIEEAYTVFSSVEEKNVVLWNA 320
Query: 198 MIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQ 257
++ + R LE + F MQ+ G+ N + ISVLS C+ L ++ GR+ ++R
Sbjct: 321 ILSGFSRHVRSLEAMIYFEKMQQMGICPNDITYISVLSACSHLGLVEKGRKYFDLMIRVH 380
Query: 258 -FDVDVYVASVLITMYIKCGELVKGK-----LIFDNFASKDIVMWNSIISG---YAQYGL 308
+V S ++ + + G L + K + FD AS MW S+++ Y L
Sbjct: 381 NVSPNVLHYSCMVDILGRAGLLHEAKDFIDRMPFDATAS----MWGSLLASCRIYRNLEL 436
Query: 309 GEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSK 357
E + K E+ + V L + +A +V R + + K+K
Sbjct: 437 AEVAAKHLFEIEPHNA-GNHVLLSNIYAANDRWEEVARARNLLKESKAK 484
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 79/159 (49%), Gaps = 2/159 (1%)
Query: 246 GRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQ 305
G HAQ++R D +++L+ MY KCG + + +FD + +V WN+++ + Q
Sbjct: 66 GMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEMPVRSLVSWNTMVGSHTQ 125
Query: 306 YGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTE 365
G EK+L +F +M G + T+ V+ AC+ V E +++ K ++
Sbjct: 126 NGDCEKALVLFMQMQKEGTSCSEFTVSSVVCACAAKCCVFECKQL-HGFALKTALDSNVF 184
Query: 366 HYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLG 404
++D+ + G V+DA + E MP D + W S++
Sbjct: 185 VGTALLDVYAKCGLVKDANLVFECMPERSD-VTWSSMVA 222
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 113/247 (45%), Gaps = 17/247 (6%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFD- 61
+ NV TA++ Y + G++ +A +F MPE++ V+W+ M+ G++++ ++A LF
Sbjct: 180 DSNVFVGTALLDVYAKCGLVKDANLVFECMPERSDVTWSSMVAGYVQNELYEEALVLFHR 239
Query: 62 ---MMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPK----KNVISWTTMISGYVNNNR 114
M E + ++ + + EG+++ K N+ +++I Y
Sbjct: 240 AQAMGLEHNQFTISSALSACAARAALIEGKQVQAVSCKTGIGSNIFVISSLIDMYAKCGI 299
Query: 115 IDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASN----SMILG 170
I+ A +F + EKN V W A+L G+++ R +A F+ M + ++ S++
Sbjct: 300 IEEAYTVFSSVEEKNVVLWNAILSGFSRHVRSLEAMIYFEKMQQMGICPNDITYISVLSA 359
Query: 171 LGQNGEVQKARVVFDQMREKDDAT-----WSGMIKVYERKGYELEVIDLFTLMQKEGVRV 225
G V+K R FD M + + +S M+ + R G E D M +
Sbjct: 360 CSHLGLVEKGRKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEAKDFIDRMPFDATAS 419
Query: 226 NFPSLIS 232
+ SL++
Sbjct: 420 MWGSLLA 426
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 103/213 (48%), Gaps = 19/213 (8%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMP----EKNVVSWTVMLGGFIRDSRIDDA 56
MPER+ V+W++MV GYV+ + EA LF + E N + + L + + +
Sbjct: 209 MPERSDVTWSSMVAGYVQNELYEEALVLFHRAQAMGLEHNQFTISSALSACAARAALIEG 268
Query: 57 RRLFDMMPE----KDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+++ + + ++ ++++ Y + G ++E +F + +KNV+ W ++SG+ +
Sbjct: 269 KQVQAVSCKTGIGSNIFVISSLIDMYAKCGIIEEAYTVFSSVEEKNVVLWNAILSGFSRH 328
Query: 113 NRIDVARKLFEVMPE----KNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASN--- 165
R A FE M + N++++ ++L + G ++ + F M V+ N
Sbjct: 329 VRSLEAMIYFEKMQQMGICPNDITYISVLSACSHLGLVEKGRKYFDLMIRVHNVSPNVLH 388
Query: 166 --SMILGLGQNGEVQKARVVFDQMREKDDATWS 196
M+ LG+ G + +A+ D+M DAT S
Sbjct: 389 YSCMVDILGRAGLLHEAKDFIDRM--PFDATAS 419
>gi|147855060|emb|CAN82371.1| hypothetical protein VITISV_027622 [Vitis vinifera]
Length = 697
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 217/645 (33%), Positives = 350/645 (54%), Gaps = 49/645 (7%)
Query: 4 RNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMM 63
N +++ YV G++ +A +F P KNVVSWT+++ G ++ +A +F M
Sbjct: 54 HNTFLSNSLMNAYVYCGLLADAKQIFHHTPCKNVVSWTILISGLAKNDCFVEAIDVFREM 113
Query: 64 P----EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKK----NVISWTTMISGYVNNNRI 115
+ + V ++++ + G + + + + NV T ++ Y +
Sbjct: 114 TMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFEGNVFVETALVDMYSKFGCM 173
Query: 116 DVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMIL------ 169
VAR+LFE M E+N VSW A++ GY+ G ++A +LF M K ++ I+
Sbjct: 174 GVARQLFESMSERNVVSWNAIVSGYSDHGFSEEAIDLFNLMRRKGLLVDFYTIMSLIPAS 233
Query: 170 --------GLGQNGE-------------------------VQKARVVFDQMREKDDATWS 196
G G +G V A VF +M KD A W+
Sbjct: 234 LSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHNCVDDAHRVFSEMFVKDVAAWT 293
Query: 197 GMIKVYERKGYELEVIDLFT-LMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVR 255
M+ + + I F ++ + ++++ L+ +LS C+ +L GR+VHA ++
Sbjct: 294 LMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIVLMGILSSCSHSGALQQGRRVHALAIK 353
Query: 256 CQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKV 315
F +++V S +I MY CG L K F KD+V WN++I+G G G ++ +
Sbjct: 354 TCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDVVCWNAMIAGNGMNGYGTDAIDL 413
Query: 316 FHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLG 375
F +M SG+ PD+ T V VL ACS+ G V EG +IF M P +HYAC++D+LG
Sbjct: 414 FLQMKGSGLDPDESTFVSVLYACSHAGMVYEGLQIFYHMVKTSHDIPNLQHYACVIDILG 473
Query: 376 RAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYIL 435
RAGQ++ A I MPF+PD ++ +LLGACR H + L ++K+ ++EP +AG Y+L
Sbjct: 474 RAGQLDAAYSFINNMPFQPDFDVYSTLLGACRIHGNIKLGHEISQKIFEMEPNDAGYYVL 533
Query: 436 LSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMR 495
LSN+YA G + V R ++R + + K PG S IE+ ++++ F + HP++ I
Sbjct: 534 LSNMYALAGNWEGVKMTRASLRSKRLKKDPGFSSIEINQEIYTFMAGE-KDHPQYFKIEG 592
Query: 496 MLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMK 555
+L+ + +++AGY P+++ +L DV ++ K L +HSEK+A+A+GL++ G IR+ K
Sbjct: 593 ILKGLILKIKKAGYVPNTNVLLQDVSDDMKKDILYHHSEKMAIAFGLMRTKPGTIIRITK 652
Query: 556 NLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
NLR C DCHSA K +SKV GR ++++DANRFH F+DG+CSCRDYW
Sbjct: 653 NLRTCNDCHSASKFVSKVFGRVLVIKDANRFHVFQDGVCSCRDYW 697
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 97/412 (23%), Positives = 169/412 (41%), Gaps = 80/412 (19%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVS--WTVM--------------- 43
M ERNVVSW A+V GY + G EA LF M K ++ +T+M
Sbjct: 183 MSERNVVSWNAIVSGYSDHGFSEEAIDLFNLMRRKGLLVDFYTIMSLIPASLSVGCLQVG 242
Query: 44 --LGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVIS 101
+ GFI + ++ + + +T ++ Y VD+ +F EM K+V +
Sbjct: 243 TGIHGFIIRTGYENDKHI-----------KTALMDIYVSHNCVDDAHRVFSEMFVKDVAA 291
Query: 102 WTTMISGYVNNNRIDVARKLFEVMP-----EKNEVSWTAMLMGYTQCGRIQDAWELFKAM 156
WT M++G+ + D A K F M + + + +L + G +Q + A+
Sbjct: 292 WTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIVLMGILSSCSHSGALQQGRRV-HAL 350
Query: 157 PMKSVVASN----SMILGLGQN-GEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEV 211
+K+ A+N S ++ + N G ++ A+ F M EKD W+ MI GY +
Sbjct: 351 AIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDVVCWNAMIAGNGMNGYGTDA 410
Query: 212 IDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDV-DVYVASVLIT 270
IDLF M+ G+ + + +SVL C+ + G Q+ +V+ D+ ++ + +I
Sbjct: 411 IDLFLQMKGSGLDPDESTFVSVLYACSHAGMVYEGLQIFYHMVKTSHDIPNLQHYACVID 470
Query: 271 MYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVT 330
+ + G+L +N + PD
Sbjct: 471 ILGRAGQLDAAYSFINNMPFQ----------------------------------PDFDV 496
Query: 331 LVGVLSACSYTGKVKEGREIFESMKSKYLVEPK-TEHYACMVDLLGRAGQVE 381
+L AC G +K G EI + + + +EP +Y + ++ AG E
Sbjct: 497 YSTLLGACRIHGNIKLGHEISQKI---FEMEPNDAGYYVLLSNMYALAGNWE 545
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 86/187 (45%), Gaps = 12/187 (6%)
Query: 228 PSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDN 287
P S S+ L L +Q+HAQ++ + ++++ L+ Y+ CG L K IF +
Sbjct: 22 PLAQSHASILRKLKDLKPLQQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHH 81
Query: 288 FASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEG 347
K++V W +ISG A+ +++ VF EM P+ VT+ VL A + G ++
Sbjct: 82 TPCKNVVSWTILISGLAKNDCFVEAIDVFREMTMGNFKPNAVTISSVLPAFANLGLIRIA 141
Query: 348 REIF-----ESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSL 402
+ + + VE +VD+ + G + A +L E+M E + + W ++
Sbjct: 142 KSVHCFWVRGGFEGNVFVE------TALVDMYSKFGCMGVARQLFESMS-ERNVVSWNAI 194
Query: 403 LGACRTH 409
+ H
Sbjct: 195 VSGYSDH 201
>gi|147801010|emb|CAN60118.1| hypothetical protein VITISV_016374 [Vitis vinifera]
Length = 1166
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 213/647 (32%), Positives = 345/647 (53%), Gaps = 59/647 (9%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF-- 60
+ NV ++ Y E G +A +F M E++++SW M+ +++D + D ++
Sbjct: 430 DSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAE 489
Query: 61 -----------------------DMMPEKDVVAQTNMVLG--------------YCQDGR 83
+ + E +V +V G Y + G
Sbjct: 490 LLQMGKVMNHVTFASALAACSNPECLIESKIVHALIIVAGFHDFLIVGNALVTMYGKLGM 549
Query: 84 VDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKN-EVSWTAMLMGYTQ 142
+ E +++ MP+ + ++W +I G+ N + A K ++++ EK ++ M+
Sbjct: 550 MMEAKKVLQTMPQPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVSVLGA 609
Query: 143 CGRIQDAWELFKAMPMKSVVA----------SNSMILGLGQNGEVQKARVVFDQMREKDD 192
C D L MP+ + + NS+I + G++ + +FD + K
Sbjct: 610 CSAPDDL--LKHGMPIHAHIVLTGFESDDYVKNSLITMYAKCGDLNSSNYIFDGLGNKSP 667
Query: 193 ATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQ 252
TW+ M+ G E + +F M+ GV ++ S L+ A+LA L+ G+Q+H
Sbjct: 668 ITWNAMVAANAHHGCGEEALKIFGEMRNVGVNLDQFSFSGGLAATANLAVLEEGQQLHGL 727
Query: 253 LVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKS 312
+++ F+ D++V + + MY KCGE+ + ++ + WN +IS +A++G +K+
Sbjct: 728 VIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQPINRSRLSWNILISAFARHGCFQKA 787
Query: 313 LKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVD 372
+ FHEM G PD VT V +LSAC++ G V EG ++SM ++ V P EH C++D
Sbjct: 788 RETFHEMLKLGPKPDHVTFVSLLSACNHGGLVDEGLAYYDSMTREFGVFPGIEHCVCIID 847
Query: 373 LLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGP 432
LLGR+G++ A I+ MP P+ + W SLL ACR H L+LA A+ LL+L+P +
Sbjct: 848 LLGRSGRLSHAEGFIKEMPVPPNDLAWRSLLAACRIHGNLELARKTAEHLLELDPSDDSA 907
Query: 433 YILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPM 492
Y+L SN+ A+ G++ DV LRK M N+ K P CSW++++ KVH F + HP
Sbjct: 908 YVLYSNVCATSGKWEDVENLRKEMGSNNIKKQPACSWVKLKDKVHSFG----MGEKYHPQ 963
Query: 493 IMRMLEKIGGLL---REAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGV 549
R+ K+G L+ +EAGY PD+SF LHD+DEE+K ++L HSE+LA+A+GL+ PE
Sbjct: 964 ASRISAKLGELMKMTKEAGYVPDTSFALHDMDEEQKEYNLWNHSERLALAFGLINTPESS 1023
Query: 550 PIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSC 596
+R+ KNLRVCGDCHS K +S ++GR+I+LRD RFHHF G CSC
Sbjct: 1024 TLRIFKNLRVCGDCHSVYKFVSGIVGRKIVLRDPYRFHHFSGGKCSC 1070
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 121/436 (27%), Positives = 206/436 (47%), Gaps = 47/436 (10%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVML--GGFIRDSRIDDARR 58
M RN SW+ M+ GYV G+ EA LF QM W + + GF+ S I R
Sbjct: 155 MRHRNEASWSTMLSGYVRVGLYEEAVGLFCQM-------WGLGVEPNGFMVASLITACSR 207
Query: 59 LFDMMPEK--------------DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTT 104
M E DV T +V Y G V +++F+EMP NV+SWT+
Sbjct: 208 SGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTS 267
Query: 105 MISGYVNNNR----IDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPM-- 158
++ GY ++ ++V +++ + N+ ++ + + CG ++D ++ +
Sbjct: 268 LMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVT---SSCGLLEDQVLGYQVLGHII 324
Query: 159 -----KSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVID 213
SV +NS+I V++A VFD M E D +W+ MI Y G E +
Sbjct: 325 QYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLR 384
Query: 214 LFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYI 273
F M+ N +L S+LSVC+S+ +L GR +H +V+ D +V + + L+T+Y
Sbjct: 385 CFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYS 444
Query: 274 KCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVG 333
+ G +L+F +D++ WNS+++ Y Q G LK+ E+ G + + VT
Sbjct: 445 EAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTFAS 504
Query: 334 VLSACSYTGKVKEGR----EIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEA 389
L+ACS + E + I + +L+ +V + G+ G + +A K+++
Sbjct: 505 ALAACSNPECLIESKIVHALIIVAGFHDFLIVGNA-----LVTMYGKLGMMMEAKKVLQT 559
Query: 390 MPFEPDAIIWGSLLGA 405
MP +PD + W +L+G
Sbjct: 560 MP-QPDRVTWNALIGG 574
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 106/365 (29%), Positives = 179/365 (49%), Gaps = 19/365 (5%)
Query: 69 VAQTNMVLG-YCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVM-- 125
+ QTN ++ Y + G ++ R +FDEM +N SW+TM+SGYV + A LF M
Sbjct: 129 IFQTNTLINMYSKFGNIEHARYVFDEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWG 188
Query: 126 --PEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKS-----VVASNSMILGLGQNGEVQ 178
E N +++ ++ G + D +K+ V +++ G G V
Sbjct: 189 LGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVY 248
Query: 179 KARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCA 238
A+ +F++M + + +W+ ++ Y G EV++++ M++EGV N + +V S C
Sbjct: 249 NAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCG 308
Query: 239 SLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNS 298
L G QV +++ F+ V VA+ LI+M+ + + +FD+ DI+ WN+
Sbjct: 309 LLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNA 368
Query: 299 IISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKY 358
+IS YA +GL +SL+ FH M + TL +LS CS +K GR I + K
Sbjct: 369 MISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGI-HGLVVKL 427
Query: 359 LVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL------GACRTHMKL 412
++ ++ L AG+ EDA + +AM E D I W S++ G C +K+
Sbjct: 428 GLDSNVCICNTLLTLYSEAGRSEDAELVFQAMT-ERDLISWNSMMACYVQDGKCLDGLKI 486
Query: 413 DLAEV 417
LAE+
Sbjct: 487 -LAEL 490
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 103/450 (22%), Positives = 193/450 (42%), Gaps = 54/450 (12%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVV 69
TA+V Y G++ A LF +MP+ NVVSWT ++ G+ + ++ M ++ V
Sbjct: 235 TALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVS 294
Query: 70 AQTNM--------------VLGYCQDGR-------------------------VDEGREI 90
N VLGY G V+E +
Sbjct: 295 GNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYV 354
Query: 91 FDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPE-KNEVSWTAMLMGYTQCGRIQD- 148
FD M + ++ISW MIS Y ++ + + F M NE + T + + C + +
Sbjct: 355 FDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNL 414
Query: 149 AWE------LFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVY 202
W + K +V N+++ + G + A +VF M E+D +W+ M+ Y
Sbjct: 415 KWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACY 474
Query: 203 ERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDV 262
+ G L+ + + + + G +N + S L+ C++ L + VHA ++ F +
Sbjct: 475 VQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPECLIESKIVHALIIVAGFHDFL 534
Query: 263 YVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSS 322
V + L+TMY K G +++ K + D V WN++I G+A+ +++K + +
Sbjct: 535 IVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPNEAVKAYKLIREK 594
Query: 323 GVMPDDVTLVGVLSACSYTGK-VKEGREIFESMKSKYLVEPKTEHYA--CMVDLLGRAGQ 379
G+ + +T+V VL ACS +K G I + L +++ Y ++ + + G
Sbjct: 595 GIPANYITMVSVLGACSAPDDLLKHGMPIHAHI---VLTGFESDDYVKNSLITMYAKCGD 651
Query: 380 VEDAMKLIEAMPFEPDAIIWGSLLGACRTH 409
+ + + + + I W +++ A H
Sbjct: 652 LNSSNYIFDGLG-NKSPITWNAMVAANAHH 680
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 88/179 (49%), Gaps = 6/179 (3%)
Query: 225 VNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLI 284
VNFP L + + S G+ +HA + ++ ++ + LI MY K G + + +
Sbjct: 97 VNFP-----LKGFSEITSQMAGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYV 151
Query: 285 FDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKV 344
FD ++ W++++SGY + GL E+++ +F +M+ GV P+ + +++ACS +G +
Sbjct: 152 FDEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYM 211
Query: 345 KEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
+ K + +V G G V +A KL E MP + + + W SL+
Sbjct: 212 ADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMP-DHNVVSWTSLM 269
>gi|225425668|ref|XP_002269694.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980
[Vitis vinifera]
gi|296086362|emb|CBI31951.3| unnamed protein product [Vitis vinifera]
Length = 595
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 208/529 (39%), Positives = 314/529 (59%), Gaps = 16/529 (3%)
Query: 84 VDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPE-------KNEVSWTAM 136
+ +FD++P+ +++ + TM GY R D + F + + ++ ++ ++
Sbjct: 71 MQHAHHLFDQIPQPDIVLFNTMARGYA---RTDTPLRAFTLFTQILFSGLFPDDYTFPSL 127
Query: 137 LMGYTQCGRIQDAWEL----FKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDD 192
L C +++ +L K ++V ++I E+ AR VFD++ E
Sbjct: 128 LKACASCKALEEGRQLHCLAIKLGLSENVYVCPTLINMYTACNEMDCARRVFDKIWEPCV 187
Query: 193 ATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQ 252
T++ MI Y R E + LF +Q ++ +++SVLS CA L +LD G+ +H
Sbjct: 188 VTYNAMITGYARGSRPNEALSLFRELQARNLKPTDVTMLSVLSSCALLGALDLGKWMHEY 247
Query: 253 LVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKS 312
+ + F+ V V + LI MY KCG L +F+N A +D W+++I YA +G G K+
Sbjct: 248 VKKNGFNRFVKVDTALIDMYAKCGSLDDAVCVFENMAVRDTQAWSAMIMAYAIHGHGLKA 307
Query: 313 LKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVD 372
+ +F EM +G PD++T +G+L ACS+TG V+EG E F M+ KY V P +HY CMVD
Sbjct: 308 VSLFKEMRKAGTEPDEITFLGLLYACSHTGLVEEGFEYFYGMRDKYGVIPGIKHYGCMVD 367
Query: 373 LLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGP 432
LLGRAG++E+A + I +P P I+W +LL AC +H ++L + +++ +L+ + G
Sbjct: 368 LLGRAGRLEEAYEFIVGLPIRPTPILWRTLLSACGSHGNVELGKRVIEQIFELDDSHGGD 427
Query: 433 YILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPM 492
YI+LSN+ A GR+ DV +RK M +R V+K PGCS +EV VH F D V H
Sbjct: 428 YIILSNLCARAGRWEDVNYVRKLMNERGVVKIPGCSSVEVNNVVHEFFSGDGV-HSVSTK 486
Query: 493 IMRMLEKIGGLLREAGYCPDSSFVLH-DVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPI 551
+ + L+++ L+ GY P++S V H D+++EEK +LRYHSEKLA+ +GL+ P G I
Sbjct: 487 LHQALDELVKELKLVGYVPNTSLVFHADMEDEEKEVTLRYHSEKLAITFGLLNTPPGTTI 546
Query: 552 RVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
RV+KNLRVCGDCHSA KLIS + R+IILRD RFHHFKDG CSC DYW
Sbjct: 547 RVVKNLRVCGDCHSAAKLISLIFDRQIILRDVQRFHHFKDGKCSCEDYW 595
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 68/339 (20%), Positives = 142/339 (41%), Gaps = 20/339 (5%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVV----SWTVMLGGFIRDSRIDDA 56
+P+ ++V + M RGY A TLF Q+ + ++ +L +++
Sbjct: 81 IPQPDIVLFNTMARGYARTDTPLRAFTLFTQILFSGLFPDDYTFPSLLKACASCKALEEG 140
Query: 57 RRL----FDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
R+L + ++V ++ Y +D R +FD++ + V+++ MI+GY
Sbjct: 141 RQLHCLAIKLGLSENVYVCPTLINMYTACNEMDCARRVFDKIWEPCVVTYNAMITGYARG 200
Query: 113 NRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMP--------MKSVVAS 164
+R + A LF + +N ++ + A +L K M + V
Sbjct: 201 SRPNEALSLFRELQARNLKPTDVTMLSVLSSCALLGALDLGKWMHEYVKKNGFNRFVKVD 260
Query: 165 NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVR 224
++I + G + A VF+ M +D WS MI Y G+ L+ + LF M+K G
Sbjct: 261 TALIDMYAKCGSLDDAVCVFENMAVRDTQAWSAMIMAYAIHGHGLKAVSLFKEMRKAGTE 320
Query: 225 VNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDV--DVYVASVLITMYIKCGELVKG- 281
+ + + +L C+ ++ G + + R ++ V + ++ + + G L +
Sbjct: 321 PDEITFLGLLYACSHTGLVEEGFEYFYGM-RDKYGVIPGIKHYGCMVDLLGRAGRLEEAY 379
Query: 282 KLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMF 320
+ I ++W +++S +G E +V ++F
Sbjct: 380 EFIVGLPIRPTPILWRTLLSACGSHGNVELGKRVIEQIF 418
>gi|255543413|ref|XP_002512769.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547780|gb|EEF49272.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 684
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 223/651 (34%), Positives = 365/651 (56%), Gaps = 54/651 (8%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVML----------GGFIRD 50
+PE ++ +WT ++ G+ + G +A ++ + +NV +L G +
Sbjct: 37 IPEPDLRTWTILISGHTQHGFPKKAIDIYSTLLSRNVRPDKFVLLSVAKACAASGDLVVA 96
Query: 51 SRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYV 110
+I D F KD+V ++ + + V+ R +FD+M K+V+SWT+M YV
Sbjct: 97 KKIHDDAIQFGF--NKDLVLGNALIDMFGKCKFVNGARCVFDDMVVKDVVSWTSMTYCYV 154
Query: 111 NNNRIDVARKLFEVMP----EKNEVSWTAML---MGYTQCGR------------------ 145
N LF M N ++ +++L Y + GR
Sbjct: 155 NCGMCRQGILLFREMGLNGIRANSLTVSSILPACADYIKLGREVHGFILRNEMEGNVYVS 214
Query: 146 ------------IQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREK--- 190
++ A +F +M + +V+ N M+ N E ++ +F QMR++
Sbjct: 215 SALVNMYASSLGLKQARLVFDSMYHRDIVSWNVMLTAYFLNKEYERGLGLFHQMRKEGIK 274
Query: 191 -DDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQV 249
+ A+W+ I + G + + MQ G++ N +++S L C +L SL G+++
Sbjct: 275 LNQASWNAAISGCMQNGQHELALGILCKMQDSGIKPNRITIVSALPGCTNLESLRGGKEI 334
Query: 250 HAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLG 309
H + R F DV + + L+ +Y KCG+L + +F+ KD+V WN++I + +G G
Sbjct: 335 HGYVFRHWFIEDVTITTALVLLYAKCGDLELSRHVFNTMPRKDVVAWNTMIMANSMHGKG 394
Query: 310 EKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYAC 369
+SL +F++M SGV P+ VT +GVLS CS++ EG +F SM S++ + P +HY+C
Sbjct: 395 GESLILFNKMLDSGVEPNSVTFIGVLSGCSHSQLADEGLLVFNSMSSEHSITPDADHYSC 454
Query: 370 MVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKN 429
MVD+L RAG++E+A I MP EP A WG+LLGACR + ++L +AA +L ++EP N
Sbjct: 455 MVDVLSRAGRLEEAYDFIRKMPIEPTAAAWGALLGACRVYKNVELGTLAASQLFEIEPDN 514
Query: 430 AGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPE 489
AG Y+LLSNI + ++ + +E+RK MR + + K PG SW++V+ KV+ F D S+ +
Sbjct: 515 AGNYVLLSNILVTAKKWVEASEIRKMMRDKGLAKTPGRSWVQVKNKVYSFVTGD-KSNEQ 573
Query: 490 HPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGV 549
MI R L++I +R GY P++ FVL +VD+E++ +L HSE+LAVA+G++
Sbjct: 574 KDMIYRFLDEIDEKMRLDGYQPNTDFVLQNVDQEQREETLCSHSERLAVAFGILNSSGKT 633
Query: 550 PIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
+RV KNLR+CGDCH+AIKLI+K++G +II+RD+ RFHHF+DG C+C D+W
Sbjct: 634 TVRVFKNLRICGDCHNAIKLIAKIVGMQIIVRDSLRFHHFRDGYCTCNDFW 684
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 122/233 (52%), Gaps = 4/233 (1%)
Query: 173 QNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLIS 232
+G++++A +FD++ E D TW+ +I + + G+ + ID+++ + VR + L+S
Sbjct: 23 NSGDLKRALYLFDKIPEPDLRTWTILISGHTQHGFPKKAIDIYSTLLSRNVRPDKFVLLS 82
Query: 233 VLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKD 292
V CA+ L +++H ++ F+ D+ + + LI M+ KC + + +FD+ KD
Sbjct: 83 VAKACAASGDLVVAKKIHDDAIQFGFNKDLVLGNALIDMFGKCKFVNGARCVFDDMVVKD 142
Query: 293 IVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFE 352
+V W S+ Y G+ + + +F EM +G+ + +T+ +L AC+ +K GRE+
Sbjct: 143 VVSWTSMTYCYVNCGMCRQGILLFREMGLNGIRANSLTVSSILPACA--DYIKLGREV-H 199
Query: 353 SMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
+ +E + +V++ + ++ A + ++M + D + W +L A
Sbjct: 200 GFILRNEMEGNVYVSSALVNMYASSLGLKQARLVFDSM-YHRDIVSWNVMLTA 251
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 67/146 (45%), Gaps = 8/146 (5%)
Query: 268 LITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPD 327
LI + G+L + +FD D+ W +ISG+ Q+G +K++ ++ + S V PD
Sbjct: 17 LIKTCLNSGDLKRALYLFDKIPEPDLRTWTILISGHTQHGFPKKAIDIYSTLLSRNVRPD 76
Query: 328 DVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLI 387
L+ V AC+ +G + ++I + ++ ++D+ G+ V A +
Sbjct: 77 KFVLLSVAKACAASGDLVVAKKIHDD-AIQFGFNKDLVLGNALIDMFGKCKFVNGARCVF 135
Query: 388 EAMPFEPDAIIWGSLL------GACR 407
+ M + D + W S+ G CR
Sbjct: 136 DDMVVK-DVVSWTSMTYCYVNCGMCR 160
>gi|356537359|ref|XP_003537195.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g13770, mitochondrial-like
[Glycine max]
Length = 600
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 215/541 (39%), Positives = 324/541 (59%), Gaps = 18/541 (3%)
Query: 72 TNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVN----NNRIDVARKLFEVMPE 127
T +++ Y + + + R + +EMP++NV+SWT MIS Y + + + ++ E
Sbjct: 65 TRLIVFYTKCDSLGDARHVLNEMPERNVVSWTAMISAYSQRGYASQALSILVQILRSGTE 124
Query: 128 KNEVSWTAM------LMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGL-GQNGEVQKA 180
NE ++ M +G+ C R + L + K+ V S +L + ++G++ +A
Sbjct: 125 SNEFTFATMPYFMYRFLGF--CLR-EAIHSLIIKLNFKAHVYVGSSLLDMYAKDGKIHEA 181
Query: 181 RVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASL 240
R +F+ + E+D + + +I Y + + E ++LF +Q+EG+ N+ + SVL+ + L
Sbjct: 182 RGIFECLPERDVVSCTAIISGYAQLDLD-EELELFLRLQREGMXSNYVTYTSVLTALSGL 240
Query: 241 ASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSII 300
A+LDHG+QVH L+ + V + + LI MY KCG L + IFD + ++ WN+++
Sbjct: 241 AALDHGKQVHNHLLCSEVPSFVILQNSLIDMYSKCGNLTYARRIFDTMRERTVISWNAML 300
Query: 301 SGYAQYGLGEKSLKVFHEMFSSG-VMPDDVTLVGVLSACSYTGKVKEGREIFESMKS-KY 358
GY+++G + L++F+ M V PD VT++ VLS CS+ G+ +G +IF M S K
Sbjct: 301 VGYSKHGERREVLELFNLMRDENKVKPDSVTVLAVLSGCSHGGQEDKGMDIFYDMTSGKI 360
Query: 359 LVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVA 418
V+P T+ Y C+VDLLGRAG+VE+A + I+ +PFEP A I G LLGAC H L + E
Sbjct: 361 SVQPDTKRYGCVVDLLGRAGRVEEAFEFIKKIPFEPSAAICGCLLGACSVHSNLGIGEFV 420
Query: 419 AKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHM 478
+LL+ EP+NAG Y++LSN+YAS GR+ DV LR M K+ V K PG S IEV++ +
Sbjct: 421 GHRLLEFEPENAGNYVILSNLYASAGRWEDVTSLRNLMLKKAVTKEPGRSLIEVDQVLQT 480
Query: 479 FTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAV 538
F DC SHP + +++ +EAGY PD S VLHDVDEE+K L HSEKLA+
Sbjct: 481 FHPSDC-SHPRREEVSAKXQELLVRFKEAGYFPDLSCVLHDVDEEQKEKILLSHSEKLAL 539
Query: 539 AYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRD 598
++GL+ PE V I V+KNLR+C DCH+ K ISK+ RE+ LRD N FH CSC D
Sbjct: 540 SFGLIATPESVLICVIKNLRICVDCHNFAKYISKIYSREVSLRDKNWFHGIVGEKCSCGD 599
Query: 599 Y 599
Y
Sbjct: 600 Y 600
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 139/269 (51%), Gaps = 24/269 (8%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM----PEKNVVSWTVM-------LGGFIR 49
MPERNVVSWTAM+ Y + G ++A ++ Q+ E N ++ M LG +R
Sbjct: 87 MPERNVVSWTAMISAYSQRGYASQALSILVQILRSGTESNEFTFATMPYFMYRFLGFCLR 146
Query: 50 DSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGY 109
++ + + + V ++++ Y +DG++ E R IF+ +P+++V+S T +ISGY
Sbjct: 147 EA---IHSLIIKLNFKAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGY 203
Query: 110 VNNNRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKS----V 161
+ +D +LF + + N V++T++L + + ++ + V
Sbjct: 204 AQLD-LDEELELFLRLQREGMXSNYVTYTSVLTALSGLAALDHGKQVHNHLLCSEVPSFV 262
Query: 162 VASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKE 221
+ NS+I + G + AR +FD MRE+ +W+ M+ Y + G EV++LF LM+ E
Sbjct: 263 ILQNSLIDMYSKCGNLTYARRIFDTMRERTVISWNAMLVGYSKHGERREVLELFNLMRDE 322
Query: 222 G-VRVNFPSLISVLSVCASLASLDHGRQV 249
V+ + ++++VLS C+ D G +
Sbjct: 323 NKVKPDSVTVLAVLSGCSHGGQEDKGMDI 351
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 94/206 (45%), Gaps = 19/206 (9%)
Query: 218 MQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGE 277
M G+ +N +VL+ C S + G++VHA ++ + VY+ + LI Y KC
Sbjct: 17 MTLXGLDMNLQDYNTVLNECVSKRAFKEGQRVHAHTIKTHYLPCVYLWTRLIVFYTKCDS 76
Query: 278 LVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGV--- 334
L + + + +++V W ++IS Y+Q G ++L + ++ SG ++ T +
Sbjct: 77 LGDARHVLNEMPERNVVSWTAMISAYSQRGYASQALSILVQILRSGTESNEFTFATMPYF 136
Query: 335 ----LSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAM 390
L C RE S+ K + + ++D+ + G++ +A + E +
Sbjct: 137 MYRFLGFCL--------REAIHSLIIKLNFKAHVYVGSSLLDMYAKDGKIHEARGIFECL 188
Query: 391 PFEPDAIIWGSLLGACRTHMKLDLAE 416
P E D + +++ + +LDL E
Sbjct: 189 P-ERDVVSCTAIISG---YAQLDLDE 210
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 99/199 (49%), Gaps = 20/199 (10%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEK----NVVSWTVMLGGFIRDSRIDDA 56
+PER+VVS TA++ GY + + E LF ++ + N V++T +L + +D
Sbjct: 188 LPERDVVSCTAIISGYAQLDL-DEELELFLRLQREGMXSNYVTYTSVLTALSGLAALDHG 246
Query: 57 RRLFDMMPEKDV----VAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+++ + + +V + Q +++ Y + G + R IFD M ++ VISW M+ GY +
Sbjct: 247 KQVHNHLLCSEVPSFVILQNSLIDMYSKCGNLTYARRIFDTMRERTVISWNAMLVGYSKH 306
Query: 113 NRIDVARKLFEVMPEKNE-----VSWTAMLMGYTQCGRIQDAWELFKAMPMKSV-VASNS 166
+LF +M ++N+ V+ A+L G + G+ ++F M + V ++
Sbjct: 307 GERREVLELFNLMRDENKVKPDSVTVLAVLSGCSHGGQEDKGMDIFYDMTSGKISVQPDT 366
Query: 167 MILG-----LGQNGEVQKA 180
G LG+ G V++A
Sbjct: 367 KRYGCVVDLLGRAGRVEEA 385
>gi|147766033|emb|CAN70212.1| hypothetical protein VITISV_038740 [Vitis vinifera]
Length = 724
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 205/577 (35%), Positives = 324/577 (56%), Gaps = 52/577 (9%)
Query: 47 FIRDSRIDDARRLF--DMMPEKDVVAQTNMV---------LGYCQDGRVDEGREIFDEMP 95
+R S+ D L+ D++ +V N+ LG + GR+ +
Sbjct: 60 LLRKSQSDGGTGLYALDLIQRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFL 119
Query: 96 KKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKA 155
+++ +++ Y +D AR++F+ MP K+ V+WTA++ G++Q R +DA LF
Sbjct: 120 DNHLVLQNIIVNMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQ 179
Query: 156 M--------------------------P-------------MKSVVASNSMILGLGQNGE 176
M P SV ++++ + G
Sbjct: 180 MLRLGLQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGH 239
Query: 177 VQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSV 236
+ A++ FD M K + +W+ +I + RKG + L MQ++ + + SV S
Sbjct: 240 MDAAQLAFDGMPTKSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVFSA 299
Query: 237 CASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMW 296
CAS+ +L+ G+ VHA +++ + ++ + L+ MY K G + K +FD D+V W
Sbjct: 300 CASIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSW 359
Query: 297 NSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKS 356
N++++G AQ+GLG+++L F +M G+ P++++ + VL+ACS++G + EG FE MK
Sbjct: 360 NTMLTGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFELMK- 418
Query: 357 KYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAE 416
KY VEP HY VDLLGR G ++ A + I MP EP A +WG+LLGACR H ++L
Sbjct: 419 KYKVEPDVPHYVTFVDLLGRVGLLDRAERFIREMPIEPTAAVWGALLGACRMHKNMELGV 478
Query: 417 VAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKV 476
AA++ +L+P ++GP +LLSNIYAS GR+ DVA++RK M++ V K P CSW+E+E V
Sbjct: 479 YAAERAFELDPHDSGPRMLLSNIYASAGRWRDVAKVRKMMKESGVKKQPACSWVEIENAV 538
Query: 477 HMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKL 536
H+F D +HP+ I E+I G ++E GY PD+S VL VD++E+ L+YHSEKL
Sbjct: 539 HLFVAND-ETHPQIKEIRGKWEEISGKIKEIGYVPDTSHVLLFVDQQEREEKLQYHSEKL 597
Query: 537 AVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKV 573
A+A+ L+ P G PIR+ KN+RVCGDCH+AIK +SK+
Sbjct: 598 ALAFALLNTPTGSPIRIKKNIRVCGDCHAAIKFVSKI 634
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 126/291 (43%), Gaps = 47/291 (16%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDM 62
+ ++V +V Y + G + +A +F +MP K++V+WT ++ GF +++R DA LF
Sbjct: 120 DNHLVLQNIIVNMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQ 179
Query: 63 M--------------------------PEKDVVA-------QTNMVLG------YCQDGR 83
M P + A Q+++ +G Y + G
Sbjct: 180 MLRLGLQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGH 239
Query: 84 VDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKN----EVSWTAMLMG 139
+D + FD MP K+ +SW +ISG+ + A L M KN +++++
Sbjct: 240 MDAAQLAFDGMPTKSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVFSA 299
Query: 140 YTQCGRI-QDAW---ELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATW 195
G + Q W + K+ N+++ + G + A+ VFD++ + D +W
Sbjct: 300 CASIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSW 359
Query: 196 SGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHG 246
+ M+ + G E +D F M + G+ N S + VL+ C+ LD G
Sbjct: 360 NTMLTGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEG 410
>gi|15239745|ref|NP_199702.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170778|sp|Q9FI80.1|PP425_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g48910
gi|10177180|dbj|BAB10314.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|15810559|gb|AAL07167.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|332008359|gb|AED95742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 646
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 213/573 (37%), Positives = 334/573 (58%), Gaps = 57/573 (9%)
Query: 84 VDEGREIFDEMPKKNVISWTTMISGYV--NNNRIDVARKLF-EVMP----EKNEVSWTAM 136
+D +IF++MP++N SW T+I G+ + ++ +A LF E+M E N ++ ++
Sbjct: 75 LDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSV 134
Query: 137 LMG-----------------------------------YTQCGRIQDAWELF------KA 155
L Y CG ++DA LF K
Sbjct: 135 LKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKD 194
Query: 156 MPMKS--------VVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGY 207
M + + +V N MI G + G+ + AR++FD+MR++ +W+ MI Y G+
Sbjct: 195 MVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGF 254
Query: 208 ELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASV 267
+ +++F M+K +R N+ +L+SVL + L SL+ G +H +D + S
Sbjct: 255 FKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSA 314
Query: 268 LITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPD 327
LI MY KCG + K +F+ ++++ W+++I+G+A +G ++ F +M +GV P
Sbjct: 315 LIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPS 374
Query: 328 DVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLI 387
DV + +L+ACS+ G V+EGR F M S +EP+ EHY CMVDLLGR+G +++A + I
Sbjct: 375 DVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFI 434
Query: 388 EAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFH 447
MP +PD +IW +LLGACR +++ + A L+ + P ++G Y+ LSN+YASQG +
Sbjct: 435 LNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWS 494
Query: 448 DVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREA 507
+V+E+R M+++++ K PGCS I+++ +H F D SHP+ I ML +I LR A
Sbjct: 495 EVSEMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVED-DSHPKAKEINSMLVEISDKLRLA 553
Query: 508 GYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAI 567
GY P ++ VL +++EE+K + L YHSEK+A A+GL+ G PIR++KNLR+C DCHS+I
Sbjct: 554 GYRPITTQVLLNLEEEDKENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSI 613
Query: 568 KLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
KLISKV R+I +RD RFHHF+DG CSC DYW
Sbjct: 614 KLISKVYKRKITVRDRKRFHHFQDGSCSCMDYW 646
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 95/426 (22%), Positives = 180/426 (42%), Gaps = 73/426 (17%)
Query: 1 MPERNVVSWTAMVRGYVE--EGMITEAGTLFWQM-----PEKNVVSWTVMLGGFIRDSRI 53
MP+RN SW ++RG+ E E A TLF++M E N ++ +L + +I
Sbjct: 85 MPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKI 144
Query: 54 DDARRLFDMMPE----KDVVAQTNMVLGYCQDGRVDEGREIF------------DEMPKK 97
+ +++ + + D +N+V Y G + + R +F + K+
Sbjct: 145 QEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKR 204
Query: 98 N--VISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKA 155
+ ++ W MI GY+ AR LF+ M +++ VSW M+ GY+ G +DA E+F+
Sbjct: 205 DGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFRE 264
Query: 156 MPMKSV---------------------------------------VASNSMILGLGQNGE 176
M + V +++I + G
Sbjct: 265 MKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGI 324
Query: 177 VQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSV 236
++KA VF+++ ++ TWS MI + G + ID F M++ GVR + + I++L+
Sbjct: 325 IEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTA 384
Query: 237 CASLASLDHGRQVHAQLVRCQ-FDVDVYVASVLITMYIKCGELVKGKLIFDNFASK-DIV 294
C+ ++ GR+ +Q+V + + ++ + + G L + + N K D V
Sbjct: 385 CSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDV 444
Query: 295 MWNSIISGYAQYG---LGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIF 351
+W +++ G +G++ + +M V D V + + + G E E+
Sbjct: 445 IWKALLGACRMQGNVEMGKRVANILMDM----VPHDSGAYVALSNMYASQGNWSEVSEMR 500
Query: 352 ESMKSK 357
MK K
Sbjct: 501 LRMKEK 506
>gi|302792921|ref|XP_002978226.1| hypothetical protein SELMODRAFT_108408 [Selaginella moellendorffii]
gi|300154247|gb|EFJ20883.1| hypothetical protein SELMODRAFT_108408 [Selaginella moellendorffii]
Length = 560
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 211/595 (35%), Positives = 330/595 (55%), Gaps = 41/595 (6%)
Query: 12 MVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQ 71
M+R + EA LF +PE++ W VM+ + + +++A +LF M +DV+
Sbjct: 1 MIRALGLRLRVAEARELFDLVPERDRFIWNVMVSAYAQRGDMNEAMKLFLRMDGRDVITW 60
Query: 72 TNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDV--ARKLFEVMPEKN 129
T ++ G+ G E +F +P +SW TMI +N R D +++LF+ MPE
Sbjct: 61 TTVIRGFALLGVFHEAEALFARIPAATAVSWNTMI--VMNAERGDAVQSKRLFDRMPEPT 118
Query: 130 EVSWTAMLMGYTQCGRIQDAWELFKAMPMKS--VVASNSMILGLGQNGEVQKARVVFDQM 187
VS TAML Y Q GRI +A LF AMP +S V+ +M+ L +GE+ +A+ VFD+M
Sbjct: 119 IVSRTAMLGVYAQAGRIDEAEVLFSAMPEESRDTVSWTTMLQALALHGELDRAKEVFDRM 178
Query: 188 REKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGR 247
+D W+ M+ + + +V L + R V++ A LA+ HG
Sbjct: 179 PCRDAVAWTTMLAAFSQSAGNSDVKSAGALFHRMPQR-------DVVAGNAMLAAYAHGG 231
Query: 248 QVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYG 307
V L EL L + A +++V W ++++G+A G
Sbjct: 232 LVDQAL-----------------------ELFHSSL---HAADRNLVTWTTLVAGFAHSG 265
Query: 308 LGEKSLKVFHEMFSSG-VMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEH 366
GE +L++F EM G MPD++ + VL AC + G VK R F +M + + + P EH
Sbjct: 266 HGELALELFQEMILDGSAMPDEIIFLSVLGACGHVGLVKIARSFFLAMVADHGISPILEH 325
Query: 367 YACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLE 426
Y CM+D++ R G++ DA +L +MPF P+ ++W SL+ ACR L+L A + ++
Sbjct: 326 YCCMIDIMARTGKLGDAEELANSMPFLPNDLVWASLIAACRNQQDLELGTRIATQAIEQS 385
Query: 427 PKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVS 486
P N Y+LL+N+++ GRF + A++RK M ++ + K PG S I ++ +V+ F D
Sbjct: 386 PGNYTAYVLLANLHSKAGRFEESAKIRKLMAEKGLTKQPGASTIRIDGRVYRFVAGDLSQ 445
Query: 487 HPEHPMIMRMLEKIGGLL-REAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKL 545
HP+ ++ +++I LL + G+ P+ + V+HDV E +KV L +HSE+LA+A G+ +
Sbjct: 446 HPDREEVLAAVDRICRLLGKHGGHSPEIAEVMHDVAEGDKVRILSHHSERLAMALGVART 505
Query: 546 PEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
G P+ ++KNLRVC DCHS IKL SK +GR I +RDA+RFHHF DG CSC+DYW
Sbjct: 506 SPGAPLTIVKNLRVCSDCHSTIKLASKALGRRISVRDASRFHHFSDGKCSCQDYW 560
>gi|4966374|gb|AAD34705.1|AC006341_33 >F3O9.28 [Arabidopsis thaliana]
Length = 1027
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 215/641 (33%), Positives = 342/641 (53%), Gaps = 53/641 (8%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMM--PEKD 67
++R Y G EA +F QMP K+++SW ++ F+ D R DA L M K
Sbjct: 390 NTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKS 449
Query: 68 VVAQT-------------------------------NMVLG------YCQDGRVDEGREI 90
V T N ++G Y + G + E R +
Sbjct: 450 VNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRV 509
Query: 91 FDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMP-EKNEVSWTAMLMGYTQCGRIQDA 149
+MP+++V++W +I GY + D A F+ M E ++ ++ + C D
Sbjct: 510 LLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDL 569
Query: 150 WELFKAMPMKSVVAS----------NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMI 199
E + P+ + + S NS+I + G++ ++ +F+ + ++ TW+ M+
Sbjct: 570 LE--RGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAML 627
Query: 200 KVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFD 259
G+ EV+ L + M+ GV ++ S LS A LA L+ G+Q+H V+ F+
Sbjct: 628 AANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFE 687
Query: 260 VDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEM 319
D ++ + MY KCGE+ + + ++ + WN +IS ++G E+ FHEM
Sbjct: 688 HDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEM 747
Query: 320 FSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQ 379
G+ P VT V +L+ACS+ G V +G ++ + + +EP EH C++DLLGR+G+
Sbjct: 748 LEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGR 807
Query: 380 VEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNI 439
+ +A I MP +P+ ++W SLL +C+ H LD AA+ L +LEP++ Y+L SN+
Sbjct: 808 LAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNM 867
Query: 440 YASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEK 499
+A+ GR+ DV +RK M +N+ K CSW++++ KV F D +HP+ I LE
Sbjct: 868 FATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGD-RTHPQTMEIYAKLED 926
Query: 500 IGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRV 559
I L++E+GY D+S L D DEE+K H+L HSE+LA+AY L+ PEG +R+ KNLR+
Sbjct: 927 IKKLIKESGYVADTSQALQDTDEEQKEHNLWNHSERLALAYALMSTPEGSTVRIFKNLRI 986
Query: 560 CGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
C DCHS K +S+V+GR I+LRD RFHHF+ GLCSC+DYW
Sbjct: 987 CSDCHSVYKFVSRVIGRRIVLRDQYRFHHFERGLCSCKDYW 1027
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 116/429 (27%), Positives = 208/429 (48%), Gaps = 35/429 (8%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMM- 63
+V+ ++ Y + G + A LF MP +N VSW M+ G +R + F M
Sbjct: 106 SVLHTNTLINMYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMC 165
Query: 64 -----PEKDVVAQTNMVLGYCQDGRV-DEGREIFDEMPKKNVIS----WTTMISGYVNNN 113
P V+A ++V + G + EG ++ + K ++S T ++ Y
Sbjct: 166 DLGIKPSSFVIA--SLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYG 223
Query: 114 RIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPM--------------K 159
+ +RK+FE MP++N VSWT++++GY+ G ++ +++K +
Sbjct: 224 LVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKDESLGRQIIGQVVKSGLES 283
Query: 160 SVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQ 219
+ NS+I LG G V A +FDQM E+D +W+ + Y + G+ E +F+LM+
Sbjct: 284 KLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMR 343
Query: 220 KEGVRVNFPSLISVLSVCASLASLDH---GRQVHAQLVRCQFDVDVYVASVLITMYIKCG 276
+ VN ++ ++LSV L +DH GR +H +V+ FD V V + L+ MY G
Sbjct: 344 RFHDEVNSTTVSTLLSV---LGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAG 400
Query: 277 ELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLS 336
V+ L+F +KD++ WNS+++ + G +L + M SSG + VT L+
Sbjct: 401 RSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALA 460
Query: 337 ACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDA 396
AC ++GR + + L + A +V + G+ G++ ++ +++ MP D
Sbjct: 461 ACFTPDFFEKGRILHGLVVVSGLFYNQIIGNA-LVSMYGKIGEMSESRRVLLQMP-RRDV 518
Query: 397 IIWGSLLGA 405
+ W +L+G
Sbjct: 519 VAWNALIGG 527
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 117/481 (24%), Positives = 215/481 (44%), Gaps = 96/481 (19%)
Query: 1 MPERNVVSWTAMVRGY------------------------------------VEEGMITE 24
MP+RNVVSWT+++ GY VE +I+
Sbjct: 235 MPDRNVVSWTSLMVGYSDKGEPEEVIDIYKDESLGRQIIGQVVKSGLESKLAVENSLISM 294
Query: 25 AGTL---------FWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPE-KDVVAQTNM 74
G++ F QM E++ +SW + + ++ I+++ R+F +M D V T +
Sbjct: 295 LGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTV 354
Query: 75 -----VLG---------------------------------YCQDGRVDEGREIFDEMPK 96
VLG Y GR E +F +MP
Sbjct: 355 STLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPT 414
Query: 97 KNVISWTTMISGYVNNNR-IDVARKLFEVMPEKNEVSWTAMLMGYTQC--------GRIQ 147
K++ISW ++++ +VN+ R +D L ++ V++ C GRI
Sbjct: 415 KDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRIL 474
Query: 148 DAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGY 207
+ + ++ N+++ G+ GE+ ++R V QM +D W+ +I Y
Sbjct: 475 HGLVVVSGLFYNQIIG-NALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDED 533
Query: 208 ELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLAS-LDHGRQVHAQLVRCQFDVDVYVAS 266
+ + F M+ EGV N+ +++SVLS C L+ G+ +HA +V F+ D +V +
Sbjct: 534 PDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKN 593
Query: 267 VLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMP 326
LITMY KCG+L + +F+ +++I+ WN++++ A +G GE+ LK+ +M S GV
Sbjct: 594 SLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSL 653
Query: 327 DDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKL 386
D + LSA + ++EG+++ + K E + + D+ + G++ + +K+
Sbjct: 654 DQFSFSEGLSAAAKLAVLEEGQQL-HGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKM 712
Query: 387 I 387
+
Sbjct: 713 L 713
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 104/422 (24%), Positives = 196/422 (46%), Gaps = 23/422 (5%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGF--------IRDSRIDDA--RRL 59
TA++ Y G+++ + +F +MP++NVVSWT ++ G+ + D D++ R++
Sbjct: 213 TAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKDESLGRQI 272
Query: 60 FDMMP----EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRI 115
+ E + + +++ G VD IFD+M +++ ISW ++ + Y N I
Sbjct: 273 IGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHI 332
Query: 116 DVARKLFEVMPE-KNEVSWTAMLMGYTQCGRI-QDAWE-----LFKAMPMKSVV-ASNSM 167
+ + ++F +M +EV+ T + + G + W L M SVV N++
Sbjct: 333 EESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTL 392
Query: 168 ILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNF 227
+ G +A +VF QM KD +W+ ++ + G L+ + L M G VN+
Sbjct: 393 LRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNY 452
Query: 228 PSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDN 287
+ S L+ C + + GR +H +V + + + L++MY K GE+ + + +
Sbjct: 453 VTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQ 512
Query: 288 FASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEG 347
+D+V WN++I GYA+ +K+L F M GV + +T+V VLSAC G + E
Sbjct: 513 MPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLER 572
Query: 348 REIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACR 407
+ + E ++ + + G + + L + + I W ++L A
Sbjct: 573 GKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLD-NRNIITWNAMLAANA 631
Query: 408 TH 409
H
Sbjct: 632 HH 633
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 120/253 (47%), Gaps = 28/253 (11%)
Query: 154 KAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVID 213
K + SV+ +N++I + G V+ AR +FD M +++ +W+ M+ R G LE ++
Sbjct: 100 KGLVRLSVLHTNTLINMYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGME 159
Query: 214 LFTLMQKEGVRVNFPSLISVLSVCASLASL-DHGRQVHAQLVRCQFDVDVYVASVLITMY 272
F M G++ + + S+++ C S+ G QVH + + DVYV++ ++ +Y
Sbjct: 160 FFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLY 219
Query: 273 IKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLV 332
G + + +F+ +++V W S++ GY+ G E+ + ++ D +L
Sbjct: 220 GVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIY----------KDESL- 268
Query: 333 GVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPF 392
G+ G+ + ++SK VE ++ +LG G V+ A + + M
Sbjct: 269 ---------GRQIIGQVVKSGLESKLAVENS------LISMLGSMGNVDYANYIFDQMS- 312
Query: 393 EPDAIIWGSLLGA 405
E D I W S+ A
Sbjct: 313 ERDTISWNSIAAA 325
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 80/159 (50%), Gaps = 3/159 (1%)
Query: 246 GRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQ 305
GR VHA V+ + V + LI MY K G + + +FD ++ V WN+++SG +
Sbjct: 91 GRAVHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVR 150
Query: 306 YGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKV-KEGREIFESMKSKYLVEPKT 364
GL + ++ F +M G+ P + +++AC +G + +EG ++ + L+
Sbjct: 151 VGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVY 210
Query: 365 EHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
A ++ L G G V + K+ E MP + + + W SL+
Sbjct: 211 VSTA-ILHLYGVYGLVSCSRKVFEEMP-DRNVVSWTSLM 247
>gi|356570490|ref|XP_003553418.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g52630-like [Glycine max]
Length = 582
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 205/522 (39%), Positives = 313/522 (59%), Gaps = 12/522 (2%)
Query: 89 EIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFE------VMPEKNEVSWTA--MLMGY 140
++FD P K+ +W+++IS + N+ A + F ++P+ + + A +
Sbjct: 63 KLFDSFPHKSATTWSSVISSFAQNDLPLPALRFFRRMLRHGLLPDDHTLPTAAKSVAALS 122
Query: 141 TQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIK 200
+ + K V +S++ + G+V AR VFD+M K+ +WSGMI
Sbjct: 123 SLPLALSLHALSLKTAHHHDVFVGSSLVDTYAKCGDVNLARKVFDEMPHKNVVSWSGMIY 182
Query: 201 VYERKGYELEVIDLF--TLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQF 258
Y + G + E ++LF L Q +RVN +L SVL VC++ + G+QVH + F
Sbjct: 183 GYSQMGLDEEALNLFKRALEQDYDIRVNDFTLSSVLRVCSASTLFELGKQVHGLCFKTSF 242
Query: 259 DVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHE 318
D +VAS LI++Y KCG + G +F+ +++ MWN+++ AQ+ ++ ++F E
Sbjct: 243 DSSCFVASSLISLYSKCGVVEGGYKVFEEVKVRNLGMWNAMLIACAQHAHTGRTFELFEE 302
Query: 319 MFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAG 378
M GV P+ +T + +L ACS+ G V++G F MK ++ +EP ++HYA +VDLLGRAG
Sbjct: 303 MERVGVKPNFITFLCLLYACSHAGLVEKGEHCFGLMK-EHGIEPGSQHYATLVDLLGRAG 361
Query: 379 QVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSN 438
++E+A+ +I+ MP +P +WG+LL CR H +LA A K+ ++ ++G +LLSN
Sbjct: 362 KLEEAVLVIKEMPMQPTESVWGALLTGCRIHGNTELASFVADKVFEMGAVSSGIQVLLSN 421
Query: 439 IYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLE 498
YA+ GR+ + A RK MR + + K G SW+E +VH F D SH + I LE
Sbjct: 422 AYAAAGRWEEAARARKMMRDQGIKKETGLSWVEEGNRVHTFAAGD-RSHGKTREIYEKLE 480
Query: 499 KIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLR 558
++G + +AGY D+SFVL +VD +EK ++RYHSE+LA+A+GL+ P PIRVMKNLR
Sbjct: 481 ELGEEMAKAGYVADTSFVLKEVDGDEKSQTIRYHSERLAIAFGLITFPPEWPIRVMKNLR 540
Query: 559 VCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
VCGDCH+AIK ISK GR II+RD NRFH F+DG C+C DYW
Sbjct: 541 VCGDCHTAIKFISKCTGRVIIVRDNNRFHRFEDGKCTCGDYW 582
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/371 (18%), Positives = 154/371 (41%), Gaps = 50/371 (13%)
Query: 12 MVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF------DMMPE 65
++ Y + + + LF P K+ +W+ ++ F ++ A R F ++P+
Sbjct: 48 LINFYSKTNLPHSSLKLFDSFPHKSATTWSSVISSFAQNDLPLPALRFFRRMLRHGLLPD 107
Query: 66 ---------------------------------KDVVAQTNMVLGYCQDGRVDEGREIFD 92
DV +++V Y + G V+ R++FD
Sbjct: 108 DHTLPTAAKSVAALSSLPLALSLHALSLKTAHHHDVFVGSSLVDTYAKCGDVNLARKVFD 167
Query: 93 EMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEK------NEVSWTAMLMGYTQCGRI 146
EMP KNV+SW+ MI GY + A LF+ E+ N+ + +++L +
Sbjct: 168 EMPHKNVVSWSGMIYGYSQMGLDEEALNLFKRALEQDYDIRVNDFTLSSVLRVCSASTLF 227
Query: 147 QDAWEL----FKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVY 202
+ ++ FK S ++S+I + G V+ VF++++ ++ W+ M+
Sbjct: 228 ELGKQVHGLCFKTSFDSSCFVASSLISLYSKCGVVEGGYKVFEEVKVRNLGMWNAMLIAC 287
Query: 203 ERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDV 262
+ + +LF M++ GV+ NF + + +L C+ ++ G + +
Sbjct: 288 AQHAHTGRTFELFEEMERVGVKPNFITFLCLLYACSHAGLVEKGEHCFGLMKEHGIEPGS 347
Query: 263 YVASVLITMYIKCGELVKGKLIFDNFASKDI-VMWNSIISGYAQYGLGEKSLKVFHEMFS 321
+ L+ + + G+L + L+ + +W ++++G +G E + V ++F
Sbjct: 348 QHYATLVDLLGRAGKLEEAVLVIKEMPMQPTESVWGALLTGCRIHGNTELASFVADKVFE 407
Query: 322 SGVMPDDVTLV 332
G + + ++
Sbjct: 408 MGAVSSGIQVL 418
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 72/168 (42%), Gaps = 14/168 (8%)
Query: 242 SLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIIS 301
SL G Q+H Q+++ F+ V LI Y K +FD+F K W+S+IS
Sbjct: 22 SLRKGLQLHGQVIKLGFEAIPLVCHHLINFYSKTNLPHSSLKLFDSFPHKSATTWSSVIS 81
Query: 302 GYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVE 361
+AQ L +L+ F M G++PDD TL K S + +
Sbjct: 82 SFAQNDLPLPALRFFRRMLRHGLLPDDHTL-------PTAAKSVAALSSLPLALSLHALS 134
Query: 362 PKTEHY------ACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
KT H+ + +VD + G V A K+ + MP + + W ++
Sbjct: 135 LKTAHHHDVFVGSSLVDTYAKCGDVNLARKVFDEMP-HKNVVSWSGMI 181
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 102/221 (46%), Gaps = 25/221 (11%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDS--RIDDARR 58
MP +NVVSW+ M+ GY + G+ EA LF + E++ + + + F S R+ A
Sbjct: 169 MPHKNVVSWSGMIYGYSQMGLDEEALNLFKRALEQD---YDIRVNDFTLSSVLRVCSAST 225
Query: 59 LFDMMPE-----------KDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMIS 107
LF++ + ++++ Y + G V+ G ++F+E+ +N+ W M+
Sbjct: 226 LFELGKQVHGLCFKTSFDSSCFVASSLISLYSKCGVVEGGYKVFEEVKVRNLGMWNAMLI 285
Query: 108 GYVNNNRIDVARKLFEVMP----EKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVA 163
+ +LFE M + N +++ +L + G ++ F M +
Sbjct: 286 ACAQHAHTGRTFELFEEMERVGVKPNFITFLCLLYACSHAGLVEKGEHCFGLMKEHGIEP 345
Query: 164 SN----SMILGLGQNGEVQKARVVFDQM-REKDDATWSGMI 199
+ +++ LG+ G++++A +V +M + ++ W ++
Sbjct: 346 GSQHYATLVDLLGRAGKLEEAVLVIKEMPMQPTESVWGALL 386
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 88/201 (43%), Gaps = 14/201 (6%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDM 62
+V +++V Y + G + A +F +MP KNVVSW+ M+ G+ + ++A LF
Sbjct: 140 HHDVFVGSSLVDTYAKCGDVNLARKVFDEMPHKNVVSWSGMIYGYSQMGLDEEALNLFKR 199
Query: 63 MPEKDVVAQTN-----MVLGYCQDGRVDE-GREI----FDEMPKKNVISWTTMISGYVNN 112
E+D + N VL C + E G+++ F + +++IS Y
Sbjct: 200 ALEQDYDIRVNDFTLSSVLRVCSASTLFELGKQVHGLCFKTSFDSSCFVASSLISLYSKC 259
Query: 113 NRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSV----VASNSMI 168
++ K+FE + +N W AML+ Q +ELF+ M V + ++
Sbjct: 260 GVVEGGYKVFEEVKVRNLGMWNAMLIACAQHAHTGRTFELFEEMERVGVKPNFITFLCLL 319
Query: 169 LGLGQNGEVQKARVVFDQMRE 189
G V+K F M+E
Sbjct: 320 YACSHAGLVEKGEHCFGLMKE 340
>gi|225433177|ref|XP_002281549.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15130 [Vitis vinifera]
gi|296083673|emb|CBI23662.3| unnamed protein product [Vitis vinifera]
Length = 685
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 215/624 (34%), Positives = 367/624 (58%), Gaps = 27/624 (4%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMP----EKNVVSWTVMLGGFIRDSRIDDA 56
M ERNVVSWTA++ GY++EG + L +M + N +++ L +++
Sbjct: 65 MLERNVVSWTALMCGYLQEGNAKGSLALLCEMGYSGVKPNEFTFSTSLKACGALGVVENG 124
Query: 57 RRLFDMMPEK-----DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVN 111
++ M + VV + + Y + GR+ ++F++MP +N++SW MI+G+ +
Sbjct: 125 MQIHGMCVKSGFEWVSVVGNATIDM-YSKCGRIGMAEQVFNKMPFRNLVSWNAMIAGHTH 183
Query: 112 NNRIDVARKLFEVMPEKNEV----SWTAMLMGYTQCGRIQDAWELFKAM-------PMKS 160
+ LF+ M + EV ++T+ L G I+ ++ ++ +++
Sbjct: 184 EGNGRKSLVLFQRMQGQGEVPDEFTFTSTLKACGALGAIRGGTQIHASLITRGFPISIRN 243
Query: 161 VVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQK 220
++AS + L + G + +A+ VFD++ +K+ +WS +I+ + ++G LE +DLF +++
Sbjct: 244 IIASAIVDL-YAKCGYLFEAQKVFDRIEQKNLISWSALIQGFAQEGNLLEAMDLFRQLRE 302
Query: 221 EGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVK 280
V+ L ++ V A LA ++ G+Q+H +++ +D+ VA+ +I MY+KCG +
Sbjct: 303 SVSNVDGFVLSIMMGVFADLALVEQGKQMHCYILKVPSGLDISVANSIIDMYLKCGLTEE 362
Query: 281 GKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSY 340
+ +F +++V W +I+GY ++GLGEK++ +F+ M G+ D+V + +LSACS+
Sbjct: 363 AERLFSEMQVRNVVSWTVMITGYGKHGLGEKAIHLFNRMQLDGIELDEVAYLALLSACSH 422
Query: 341 TGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWG 400
+G ++E +E F + + + ++P EHYACMVD+LGRAGQ+++A LIE M +P+ IW
Sbjct: 423 SGLIRESQEYFSRLCNNHQMKPNIEHYACMVDILGRAGQLKEAKNLIENMKLKPNEGIWQ 482
Query: 401 SLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRN 460
+LL ACR H L++ + L +++ N Y+++SNIYA G + + +RK ++ +
Sbjct: 483 TLLSACRVHGNLEIGREVGEILFRMDTDNPVNYVMMSNIYAEAGYWKECERVRKLVKAKG 542
Query: 461 VIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLR-EAGYCPDSSFVLHD 519
+ K G SW+E+ K++H F G D +HP I ML+++ ++ E GY F LHD
Sbjct: 543 LKKEAGQSWVEINKEIHFFYGGD-DTHPLTEKIHEMLKEMERRVKEEVGYAYGLRFALHD 601
Query: 520 VDEEEKVHSLRYHSEKLAVAYGLV---KLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGR 576
V+EE K +LR HSEKLA+ LV +G IRV KNLRVCGDCH IK +SK++ +
Sbjct: 602 VEEESKEENLRVHSEKLAIGLALVCDGMEKKGGVIRVFKNLRVCGDCHEFIKGLSKILKK 661
Query: 577 EIILRDANRFHHFKDGLCSCRDYW 600
++RDANRFH F+DGLCSC DYW
Sbjct: 662 VFVVRDANRFHRFEDGLCSCGDYW 685
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 127/244 (52%), Gaps = 2/244 (0%)
Query: 161 VVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQK 220
++ +N +I G+ V A VFD+M E++ +W+ ++ Y ++G + L M
Sbjct: 39 LIMNNDLIDMYGKCSRVDLACSVFDRMLERNVVSWTALMCGYLQEGNAKGSLALLCEMGY 98
Query: 221 EGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVK 280
GV+ N + + L C +L +++G Q+H V+ F+ V + I MY KCG +
Sbjct: 99 SGVKPNEFTFSTSLKACGALGVVENGMQIHGMCVKSGFEWVSVVGNATIDMYSKCGRIGM 158
Query: 281 GKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSY 340
+ +F+ +++V WN++I+G+ G G KSL +F M G +PD+ T L AC
Sbjct: 159 AEQVFNKMPFRNLVSWNAMIAGHTHEGNGRKSLVLFQRMQGQGEVPDEFTFTSTLKACGA 218
Query: 341 TGKVKEGREIFESMKSK-YLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIW 399
G ++ G +I S+ ++ + + + + +VDL + G + +A K+ + + + + I W
Sbjct: 219 LGAIRGGTQIHASLITRGFPISIRNIIASAIVDLYAKCGYLFEAQKVFDRIE-QKNLISW 277
Query: 400 GSLL 403
+L+
Sbjct: 278 SALI 281
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 87/180 (48%), Gaps = 3/180 (1%)
Query: 230 LISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFA 289
L +L C+ D G QVHA V F D+ + + LI MY KC + +FD
Sbjct: 7 LAKLLRNCSKNGLFDQGLQVHAAAVNMGFGFDLIMNNDLIDMYGKCSRVDLACSVFDRML 66
Query: 290 SKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGRE 349
+++V W +++ GY Q G + SL + EM SGV P++ T L AC G V+ G +
Sbjct: 67 ERNVVSWTALMCGYLQEGNAKGSLALLCEMGYSGVKPNEFTFSTSLKACGALGVVENGMQ 126
Query: 350 IFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTH 409
I M K E + +D+ + G++ A ++ MPF + + W +++ A TH
Sbjct: 127 I-HGMCVKSGFEWVSVVGNATIDMYSKCGRIGMAEQVFNKMPFR-NLVSWNAMI-AGHTH 183
>gi|225432810|ref|XP_002283562.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g43790-like [Vitis vinifera]
Length = 590
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 209/530 (39%), Positives = 312/530 (58%), Gaps = 20/530 (3%)
Query: 90 IFDEMPKKNVISWTTMISGYVN---NNRIDVA---RKLFEVMPEKNEVSWTAMLMG---- 139
IF+ +P + + T+IS N + I + R L + N ++ ++
Sbjct: 62 IFNHIPNPTIFLYNTLISSLANIKPHTHIAFSLYSRVLTHTTLKPNGFTFPSLFKACGSQ 121
Query: 140 -YTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGM 198
+ + GR L P +++ + G+V R +F+Q+ + D A+W+ +
Sbjct: 122 PWLRHGRALHTHVLKFLEPTCDPFVQAALLNYYAKCGKVGACRYLFNQISKPDLASWNSI 181
Query: 199 IKVY--------ERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVH 250
+ Y E LEV+ LF MQK ++ N +L++++S CA L +L G H
Sbjct: 182 LSAYVHNSGAICEDVSLSLEVLTLFIEMQKSLIKANEVTLVALISACAELGALSQGAWAH 241
Query: 251 AQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGE 310
+++ ++ +V + LI MY KCG L +FD +D + +N++I G+A +G G
Sbjct: 242 VYVLKHNLKLNHFVGTALIDMYSKCGCLDLACQLFDQLPHRDTLCYNAMIGGFAIHGYGH 301
Query: 311 KSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACM 370
++L +F +M G+ PDDVTLV + +CS+ G V+EG ++FESMK Y VEPK EHY C+
Sbjct: 302 QALDLFKKMTLEGLAPDDVTLVVTMCSCSHVGLVEEGCDVFESMKEVYGVEPKLEHYGCL 361
Query: 371 VDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNA 430
VDLLGRAG++ +A + + MP +P+A+IW SLLGA R H L++ EV K L+QLEP+ +
Sbjct: 362 VDLLGRAGRLREAEERVLNMPMKPNAVIWRSLLGAARVHGNLEIGEVVLKHLIQLEPETS 421
Query: 431 GPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEH 490
G Y+LLSN+YAS R+ DV +RK M+ + K PG S +EV +H F D +HP
Sbjct: 422 GNYVLLSNMYASINRWDDVKRVRKLMKDHGINKVPGSSLVEVGGAMHEFLMGD-KTHPRS 480
Query: 491 PMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVP 550
I LE++ L E G+ P + VL D++EEEK +L YHSE+LA+A+ L+ P
Sbjct: 481 KEIYLKLEEMSRRLHEYGHKPRTLEVLFDIEEEEKEDALSYHSERLAIAFALIASHHCAP 540
Query: 551 IRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
IR++KNLRVCGDCH++ KLISK+ REII+RD NRFHHFK+G CSC DYW
Sbjct: 541 IRIIKNLRVCGDCHTSSKLISKIYEREIIVRDRNRFHHFKEGACSCSDYW 590
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 103/220 (46%), Gaps = 18/220 (8%)
Query: 47 FIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMI 106
++R R L + P D Q ++ Y + G+V R +F+++ K ++ SW +++
Sbjct: 123 WLRHGRALHTHVLKFLEPTCDPFVQAALLNYYAKCGKVGACRYLFNQISKPDLASWNSIL 182
Query: 107 SGYVNNN---------RIDVARKLFEV---MPEKNEVSWTAMLMGYTQCGRI-QDAWE-- 151
S YV+N+ ++V E+ + + NEV+ A++ + G + Q AW
Sbjct: 183 SAYVHNSGAICEDVSLSLEVLTLFIEMQKSLIKANEVTLVALISACAELGALSQGAWAHV 242
Query: 152 --LFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYEL 209
L + + V + ++I + G + A +FDQ+ +D ++ MI + GY
Sbjct: 243 YVLKHNLKLNHFVGT-ALIDMYSKCGCLDLACQLFDQLPHRDTLCYNAMIGGFAIHGYGH 301
Query: 210 EVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQV 249
+ +DLF M EG+ + +L+ + C+ + ++ G V
Sbjct: 302 QALDLFKKMTLEGLAPDDVTLVVTMCSCSHVGLVEEGCDV 341
Score = 45.8 bits (107), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 79/190 (41%), Gaps = 31/190 (16%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVV 69
TA++ Y + G + A LF Q+P ++ + + M+GGF A LF M + +
Sbjct: 257 TALIDMYSKCGCLDLACQLFDQLPHRDTLCYNAMIGGFAIHGYGHQALDLFKKMTLEGLA 316
Query: 70 A-QTNMVLGYC---QDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVM 125
+V+ C G V+EG ++F+ M ++++ V
Sbjct: 317 PDDVTLVVTMCSCSHVGLVEEGCDVFESM------------------------KEVYGVE 352
Query: 126 PEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQ-NGEVQKARVVF 184
P+ L+G + GR+++A E MPMK +LG + +G ++ VV
Sbjct: 353 PKLEHYGCLVDLLG--RAGRLREAEERVLNMPMKPNAVIWRSLLGAARVHGNLEIGEVVL 410
Query: 185 DQMREKDDAT 194
+ + + T
Sbjct: 411 KHLIQLEPET 420
>gi|297817620|ref|XP_002876693.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297322531|gb|EFH52952.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 572
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 200/481 (41%), Positives = 298/481 (61%), Gaps = 8/481 (1%)
Query: 127 EKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQ 186
+K+ T++L Y+ CG + A +F K + A NS++ + G + AR +FD+
Sbjct: 93 DKDPFVRTSLLNMYSSCGDLSSALRIFDESVSKDLPAWNSVVNAYAKAGLINHARKLFDE 152
Query: 187 MREKDDATWSGMIKVYERKGYELEVIDLFTLMQ-----KEGVRVNFPSLISVLSVCASLA 241
M E++ +WS +I Y G E +DLF MQ + V N ++ +VLS C L
Sbjct: 153 MPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEVFVSPNKFTMSTVLSACGRLG 212
Query: 242 SLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASK-DIVMWNSII 300
+L+ G+ VH+ + + ++D+ + + LI MY KCG L + K +FD SK D+ ++++I
Sbjct: 213 ALEQGKWVHSYIDKYGVEIDIVLGTALIDMYAKCGSLERAKRVFDALGSKKDVKAYSAMI 272
Query: 301 SGYAQYGLGEKSLKVFHEMFSSG-VMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYL 359
A YGL ++ +VF EM +S + P+ VT VG+L AC + G + +G+ F+ M ++
Sbjct: 273 CCLAMYGLTDECFQVFSEMTTSNNINPNSVTFVGILGACVHRGLINKGKSYFKMMTEEFG 332
Query: 360 VEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAA 419
+ P +HY CMVDL GR+G +++A I +MP EPD +IWGSLL R + E A
Sbjct: 333 ITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGDIKTCEGAL 392
Query: 420 KKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMF 479
K+L++L+P N+G Y+LLSN+YA GR+ +V +R M + + K PGCS++EVE VH F
Sbjct: 393 KRLIELDPMNSGAYVLLSNVYAKTGRWIEVKRIRHEMEVKGIKKVPGCSYVEVEGVVHEF 452
Query: 480 TGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVA 539
D S E I MLE+I LREAGY D+ VL D++E++K +L YHSEKLA+A
Sbjct: 453 VVGD-ESQQESERIYAMLEEIMQRLREAGYVSDTKEVLLDLEEKDKEMALSYHSEKLAIA 511
Query: 540 YGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDY 599
+ L+K G P+R++KNLR+CGDCH +K+ISK+ REI++RD NRFHHF DG CSCRD+
Sbjct: 512 FCLMKTRPGTPVRIIKNLRICGDCHLVMKMISKLFSREIVVRDCNRFHHFSDGSCSCRDF 571
Query: 600 W 600
W
Sbjct: 572 W 572
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 142/306 (46%), Gaps = 20/306 (6%)
Query: 20 GMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYC 79
G T A L + + +K+ T +L + + A R+FD KD+ A ++V Y
Sbjct: 80 GQRTHAQILLFGL-DKDPFVRTSLLNMYSSCGDLSSALRIFDESVSKDLPAWNSVVNAYA 138
Query: 80 QDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVM--PEKNEVSWT--- 134
+ G ++ R++FDEMP++NVISW+ +I+GYV + A LF M P+ NEV +
Sbjct: 139 KAGLINHARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEVFVSPNK 198
Query: 135 -AMLMGYTQCGRI----QDAW---ELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQ 186
M + CGR+ Q W + K +V ++I + G +++A+ VFD
Sbjct: 199 FTMSTVLSACGRLGALEQGKWVHSYIDKYGVEIDIVLGTALIDMYAKCGSLERAKRVFDA 258
Query: 187 MREKDDA-TWSGMIKVYERKGYELEVIDLFTLM-QKEGVRVNFPSLISVLSVCASLASLD 244
+ K D +S MI G E +F+ M + N + + +L C ++
Sbjct: 259 LGSKKDVKAYSAMICCLAMYGLTDECFQVFSEMTTSNNINPNSVTFVGILGACVHRGLIN 318
Query: 245 HGRQVHAQLVRCQFDVDVYVA--SVLITMYIKCGELVKGKLIFDNFA-SKDIVMWNSIIS 301
G+ + +++ +F + + ++ +Y + G + + + + D+++W S++S
Sbjct: 319 KGKS-YFKMMTEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLS 377
Query: 302 GYAQYG 307
G G
Sbjct: 378 GSRMLG 383
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 101/228 (44%), Gaps = 37/228 (16%)
Query: 212 IDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITM 271
I ++ M+ V +F + +L + L G++ HAQ++ D D +V + L+ M
Sbjct: 46 ISVYFRMRHHCVSPDFHTFPFLLPSFHNPIHLPLGQRTHAQILLFGLDKDPFVRTSLLNM 105
Query: 272 YIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVM------ 325
Y CG+L IFD SKD+ WNS+++ YA+ GL + K+F EM V+
Sbjct: 106 YSSCGDLSSALRIFDESVSKDLPAWNSVVNAYAKAGLINHARKLFDEMPERNVISWSCLI 165
Query: 326 ------------------------------PDDVTLVGVLSACSYTGKVKEGREIFESMK 355
P+ T+ VLSAC G +++G+ + S
Sbjct: 166 NGYVMCGKYKEALDLFREMQLPKPNEVFVSPNKFTMSTVLSACGRLGALEQGKWV-HSYI 224
Query: 356 SKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
KY VE ++D+ + G +E A ++ +A+ + D + +++
Sbjct: 225 DKYGVEIDIVLGTALIDMYAKCGSLERAKRVFDALGSKKDVKAYSAMI 272
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 121/253 (47%), Gaps = 24/253 (9%)
Query: 4 RNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMM 63
+++ +W ++V Y + G+I A LF +MPE+NV+SW+ ++ G++ + +A LF M
Sbjct: 125 KDLPAWNSVVNAYAKAGLINHARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREM 184
Query: 64 ----PEKDVVAQT----NMVLGYC-QDGRVDEGREIFDEMPKK----NVISWTTMISGYV 110
P + V+ + VL C + G +++G+ + + K +++ T +I Y
Sbjct: 185 QLPKPNEVFVSPNKFTMSTVLSACGRLGALEQGKWVHSYIDKYGVEIDIVLGTALIDMYA 244
Query: 111 NNNRIDVARKLFEVMPEKNEV-SWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSM-- 167
++ A+++F+ + K +V +++AM+ G + +++F M + + NS+
Sbjct: 245 KCGSLERAKRVFDALGSKKDVKAYSAMICCLAMYGLTDECFQVFSEMTTSNNINPNSVTF 304
Query: 168 --ILGLG-QNGEVQKARVVFDQMREKDDAT-----WSGMIKVYERKGYELEVIDLFTLMQ 219
ILG G + K + F M E+ T + M+ +Y R G E M
Sbjct: 305 VGILGACVHRGLINKGKSYFKMMTEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMP 364
Query: 220 KEGVRVNFPSLIS 232
E + + SL+S
Sbjct: 365 MEPDVLIWGSLLS 377
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 121/283 (42%), Gaps = 59/283 (20%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLF--WQMPEKN---------------------- 36
MPERNV+SW+ ++ GYV G EA LF Q+P+ N
Sbjct: 153 MPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEVFVSPNKFTMSTVLSACGRLG 212
Query: 37 --------------------VVSWTVMLGGFIRDSRIDDARRLFDMM-PEKDVVAQTNMV 75
+V T ++ + + ++ A+R+FD + +KDV A + M+
Sbjct: 213 ALEQGKWVHSYIDKYGVEIDIVLGTALIDMYAKCGSLERAKRVFDALGSKKDVKAYSAMI 272
Query: 76 LGYCQDGRVDEGREIFDEMPKKNVI-----SWTTMISGYVNNNRIDVARKLFEVMPEKNE 130
G DE ++F EM N I ++ ++ V+ I+ + F++M E+
Sbjct: 273 CCLAMYGLTDECFQVFSEMTTSNNINPNSVTFVGILGACVHRGLINKGKSYFKMMTEEFG 332
Query: 131 VS-----WTAMLMGYTQCGRIQDAWELFKAMPMK-SVVASNSMILGLGQNGEVQKARVVF 184
++ + M+ Y + G I++A +MPM+ V+ S++ G G+++
Sbjct: 333 ITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGDIKTCEGAL 392
Query: 185 DQMREKD---DATWSGMIKVYERKGYELEVIDLFTLMQKEGVR 224
++ E D + + VY + G +EV + M+ +G++
Sbjct: 393 KRLIELDPMNSGAYVLLSNVYAKTGRWIEVKRIRHEMEVKGIK 435
>gi|449490721|ref|XP_004158687.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g21065-like [Cucumis sativus]
Length = 609
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 213/532 (40%), Positives = 306/532 (57%), Gaps = 32/532 (6%)
Query: 89 EIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQD 148
+IF+++ N+ +W TMI G+ + A +LF M + + +
Sbjct: 90 QIFNQIQAPNIFTWNTMIRGFAESENPSPAVELFSQMHAASSILPDTHTFPF-------- 141
Query: 149 AWELFKAMP----------MKSVVASNSM-ILGLGQN---------GEVQKARVVFDQMR 188
LFKA+ + SVV N L QN G + A VF+ M
Sbjct: 142 ---LFKAVAKLMDVSLGEGIHSVVVRNGFDSLRFVQNSLVHMYSVLGSLXSAYQVFEIMS 198
Query: 189 EKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQ 248
+D W+ +I + G E + L+ M EGV + +++S+LS C L +L G +
Sbjct: 199 YRDRVAWNSVINGFALNGMPNEALTLYREMGSEGVEPDGFTMVSLLSACVELGALALGER 258
Query: 249 VHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGL 308
VH +V+ + + ++ L+ +Y KCG + +FD + +V W S+I G A GL
Sbjct: 259 VHMYMVKVGLVQNQHASNALLDLYSKCGNFRDAQKVFDEMEERSVVSWTSLIVGLAVNGL 318
Query: 309 GEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYA 368
G ++LK+F E+ G+ P ++T VGVL ACS+ G + EG F MK +Y + P+ EH+
Sbjct: 319 GNEALKLFGELERQGLKPSEITFVGVLYACSHCGMLDEGFNYFRRMKEEYGILPRIEHHG 378
Query: 369 CMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPK 428
CMVDLL RAG+V DA I MP P+A+IW +LLGAC H L+L EVA ++ +LE +
Sbjct: 379 CMVDLLCRAGKVGDAYDYIRNMPVPPNAVIWRTLLGACTIHGHLELGEVARAEIQRLEQR 438
Query: 429 NAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHP 488
++G ++LLSN+YAS+ R+ DV +RK M + V K PG S +E++ +V+ F D SHP
Sbjct: 439 HSGDFVLLSNLYASERRWLDVQNVRKIMLMKGVKKTPGYSLVELKNRVYEFIMGD-RSHP 497
Query: 489 EHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEG 548
+ ML KI LL+ GY P + VL D++EEEK +L +H+EK+A+A+ LV P G
Sbjct: 498 QSEETYAMLAKITQLLKIEGYVPRTVNVLADIEEEEKETALSHHTEKVAIAFMLVNTPPG 557
Query: 549 VPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
PIR+MKNLRVC DCH AIKLISKV REII+RD +RFHHFKDG CSC+DYW
Sbjct: 558 TPIRIMKNLRVCADCHLAIKLISKVFEREIIVRDRSRFHHFKDGSCSCKDYW 609
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 129/272 (47%), Gaps = 16/272 (5%)
Query: 143 CGRIQD------AWELFKAMPMKSVVASNSMILGL-GQNGEVQKARVVFDQMREKDDATW 195
CG Q A+ + +P ++ + +I L + + A +F+Q++ + TW
Sbjct: 44 CGSSQSKLKQIHAFSIRHGVPPQNPDFNKHLIFALVSLSAPMSFAAQIFNQIQAPNIFTW 103
Query: 196 SGMIKVYERKGYELEVIDLFTLMQKEGVRV----NFPSLISVLSVCASLASLDHGRQVHA 251
+ MI+ + ++LF+ M + FP L + A L + G +H+
Sbjct: 104 NTMIRGFAESENPSPAVELFSQMHAASSILPDTHTFPFLFKAV---AKLMDVSLGEGIHS 160
Query: 252 QLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEK 311
+VR FD +V + L+ MY G L +F+ + +D V WNS+I+G+A G+ +
Sbjct: 161 VVVRNGFDSLRFVQNSLVHMYSVLGSLXSAYQVFEIMSYRDRVAWNSVINGFALNGMPNE 220
Query: 312 SLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMV 371
+L ++ EM S GV PD T+V +LSAC G + G + M LV+ + A ++
Sbjct: 221 ALTLYREMGSEGVEPDGFTMVSLLSACVELGALALGERVHMYMVKVGLVQNQHASNA-LL 279
Query: 372 DLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
DL + G DA K+ + M E + W SL+
Sbjct: 280 DLYSKCGNFRDAQKVFDEME-ERSVVSWTSLI 310
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 115/263 (43%), Gaps = 25/263 (9%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQM-------PEKNVVSWTVMLGGFIRDSRIDDA- 56
N+ +W M+RG+ E + A LF QM P+ + + + D + +
Sbjct: 99 NIFTWNTMIRGFAESENPSPAVELFSQMHAASSILPDTHTFPFLFKAVAKLMDVSLGEGI 158
Query: 57 -----RRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVN 111
R FD + Q ++V Y G + ++F+ M ++ ++W ++I+G+
Sbjct: 159 HSVVVRNGFDSLR----FVQNSLVHMYSVLGSLXSAYQVFEIMSYRDRVAWNSVINGFAL 214
Query: 112 NNRIDVARKLFEVMP----EKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVV----A 163
N + A L+ M E + + ++L + G + + M +V A
Sbjct: 215 NGMPNEALTLYREMGSEGVEPDGFTMVSLLSACVELGALALGERVHMYMVKVGLVQNQHA 274
Query: 164 SNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGV 223
SN+++ + G + A+ VFD+M E+ +W+ +I G E + LF ++++G+
Sbjct: 275 SNALLDLYSKCGNFRDAQKVFDEMEERSVVSWTSLIVGLAVNGLGNEALKLFGELERQGL 334
Query: 224 RVNFPSLISVLSVCASLASLDHG 246
+ + + + VL C+ LD G
Sbjct: 335 KPSEITFVGVLYACSHCGMLDEG 357
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 84/168 (50%), Gaps = 12/168 (7%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV----VSWTVMLGGFIRDSRIDDA 56
M R+ V+W +++ G+ GM EA TL+ +M + V + +L + +
Sbjct: 197 MSYRDRVAWNSVINGFALNGMPNEALTLYREMGSEGVEPDGFTMVSLLSACVELGALALG 256
Query: 57 RRLFDMMPEKDVVAQ---TNMVLG-YCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
R+ M + +V +N +L Y + G + +++FDEM +++V+SWT++I G N
Sbjct: 257 ERVHMYMVKVGLVQNQHASNALLDLYSKCGNFRDAQKVFDEMEERSVVSWTSLIVGLAVN 316
Query: 113 NRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAM 156
+ A KLF + + +E+++ +L + CG + + + F+ M
Sbjct: 317 GLGNEALKLFGELERQGLKPSEITFVGVLYACSHCGMLDEGFNYFRRM 364
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 73/174 (41%), Gaps = 13/174 (7%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSR----IDDA 56
M ER+VVSWT+++ G G+ EA LF ++ + + + G + +D+
Sbjct: 298 MEERSVVSWTSLIVGLAVNGLGNEALKLFGELERQGLKPSEITFVGVLYACSHCGMLDEG 357
Query: 57 RRLFDMMPEK-----DVVAQTNMVLGYCQDGRVDEGREIFDEMP-KKNVISWTTMISGYV 110
F M E+ + MV C+ G+V + + MP N + W T++
Sbjct: 358 FNYFRRMKEEYGILPRIEHHGCMVDLLCRAGKVGDAYDYIRNMPVPPNAVIWRTLLGACT 417
Query: 111 NNNRI---DVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSV 161
+ + +VAR + + +++ + + Y R D + K M MK V
Sbjct: 418 IHGHLELGEVARAEIQRLEQRHSGDFVLLSNLYASERRWLDVQNVRKIMLMKGV 471
>gi|15229194|ref|NP_190540.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75183401|sp|Q9M2Y7.1|PP274_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g49710
gi|6723416|emb|CAB66909.1| putative protein [Arabidopsis thaliana]
gi|332645058|gb|AEE78579.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 721
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 229/674 (33%), Positives = 357/674 (52%), Gaps = 86/674 (12%)
Query: 12 MVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQ 71
V Y + G ++ A F+ E NV S+ V++ + +DS+I AR+LFD +P+ D V+
Sbjct: 49 FVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSY 108
Query: 72 TNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN--NRIDVARKL-------- 121
++ GY +F M K +SG + +R+D+ ++L
Sbjct: 109 NTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGLIAACCDRVDLIKQLHCFSVSGG 168
Query: 122 ---------------------------FEVMPE-KNEVSWTAMLMGYTQCGRIQDAWELF 153
F M E ++EVSW +M++ Y Q A L+
Sbjct: 169 FDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALY 228
Query: 154 KAMPMK--------------SVVASNSMI-----------LGLGQNGEVQKARV------ 182
K M K ++ + + +I G QN V +
Sbjct: 229 KEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKC 288
Query: 183 -----------VFDQMREKDDATWSGMIKVYE-RKGYELEVIDLFTLMQKEGVRVNFPSL 230
VF ++ D W+ MI Y + E + F MQ+ G R + S
Sbjct: 289 GGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSF 348
Query: 231 ISVLSVCASLASLDHGRQVHAQLVRCQFDVD-VYVASVLITMYIKCGELVKGKLIFDNFA 289
+ V S C++L+S +Q+H ++ + + V + LI++Y K G L + +FD
Sbjct: 349 VCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMP 408
Query: 290 SKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGRE 349
+ V +N +I GYAQ+G G ++L ++ M SG+ P+ +T V VLSAC++ GKV EG+E
Sbjct: 409 ELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQE 468
Query: 350 IFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTH 409
F +MK + +EP+ EHY+CM+DLLGRAG++E+A + I+AMP++P ++ W +LLGACR H
Sbjct: 469 YFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKH 528
Query: 410 MKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSW 469
+ LAE AA +L+ ++P A PY++L+N+YA ++ ++A +RK+MR + + K PGCSW
Sbjct: 529 KNMALAERAANELMVMQPLAATPYVMLANMYADARKWEEMASVRKSMRGKRIRKKPGCSW 588
Query: 470 IEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVL---HDVDEEEKV 526
IEV+KK H+F D SHP + LE++ +++ GY D + + + E ++
Sbjct: 589 IEVKKKKHVFVAEDW-SHPMIREVNEYLEEMMKKMKKVGYVMDKKWAMVKEDEAGEGDEE 647
Query: 527 HSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRF 586
L +HSEKLAVA+GL+ +G + V+KNLR+CGDCH+AIK +S V GREII+RD RF
Sbjct: 648 MRLGHHSEKLAVAFGLMSTRDGEELVVVKNLRICGDCHNAIKFMSAVAGREIIVRDNLRF 707
Query: 587 HHFKDGLCSCRDYW 600
H FKDG CSC DYW
Sbjct: 708 HCFKDGKCSCGDYW 721
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 94/215 (43%), Gaps = 20/215 (9%)
Query: 5 NVVSWTAMVRGY-VEEGMITEAGTLFWQMPE----KNVVSWTVMLGGFIRDSRIDDARRL 59
++V W M+ GY + E + EA F QM + S+ + S +++
Sbjct: 308 DLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQI 367
Query: 60 FDM-----MPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNR 114
+ +P + ++ Y + G + + R +FD MP+ N +S+ MI GY +
Sbjct: 368 HGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGH 427
Query: 115 IDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNS---- 166
A L++ M + N++++ A+L CG++ + E F M + +
Sbjct: 428 GTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYS 487
Query: 167 -MILGLGQNGEVQKARVVFDQMREKDDA-TWSGMI 199
MI LG+ G++++A D M K + W+ ++
Sbjct: 488 CMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALL 522
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 63/132 (47%), Gaps = 14/132 (10%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEK----NVVSWTVMLGGFIRDSRIDDA 56
MPE N VS+ M++GY + G TEA L+ +M + N +++ +L ++D+
Sbjct: 407 MPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEG 466
Query: 57 RRLFDMM-------PEKDVVAQTNMVLGYCQDGRVDEGREIFDEMP-KKNVISWTTMISG 108
+ F+ M PE + + +LG + G+++E D MP K ++W ++
Sbjct: 467 QEYFNTMKETFKIEPEAEHYSCMIDLLG--RAGKLEEAERFIDAMPYKPGSVAWAALLGA 524
Query: 109 YVNNNRIDVARK 120
+ + +A +
Sbjct: 525 CRKHKNMALAER 536
Score = 45.1 bits (105), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 41/204 (20%), Positives = 74/204 (36%), Gaps = 52/204 (25%)
Query: 246 GRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKL---------------------- 283
G+ +HA V+ Y+++ + +Y KCG L +
Sbjct: 27 GKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVKAYAK 86
Query: 284 ---------IFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGV 334
+FD D V +N++ISGYA ++ +F M G D TL G+
Sbjct: 87 DSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGL 146
Query: 335 LSACS---------YTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMK 385
++AC + V G + + S+ + + V + G + +A+
Sbjct: 147 IAACCDRVDLIKQLHCFSVSGGFDSYSSVNNAF------------VTYYSKGGLLREAVS 194
Query: 386 LIEAMPFEPDAIIWGSLLGACRTH 409
+ M D + W S++ A H
Sbjct: 195 VFYGMDELRDEVSWNSMIVAYGQH 218
>gi|297814598|ref|XP_002875182.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321020|gb|EFH51441.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 605
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 213/550 (38%), Positives = 325/550 (59%), Gaps = 17/550 (3%)
Query: 65 EKDVVAQTNMVLGYCQDGRVDE----GREIFDEMPKKNVISWTTMISGYV-NNNRIDVAR 119
++DV T ++ +C + + R +FD M + +++ + ++ GY + N ++V
Sbjct: 59 QEDVSFNTKLI-NFCTESPTESSMSYARHLFDAMSEPDIVIFNSIARGYSRSTNPLEVFN 117
Query: 120 KLFEVMPEK---NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASN-----SMILGL 171
E++ + + ++ ++L +++ +L + MK V N ++I
Sbjct: 118 LFVEILEDDLLPDNYTFPSLLKACAVAKALEEGRQL-HCLSMKLGVDDNVYVCPTLINMY 176
Query: 172 GQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLI 231
+ +V AR VFD++ E ++ MI Y R+ E + LF MQ + ++ N +L+
Sbjct: 177 TECEDVDAARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKNLKPNEITLL 236
Query: 232 SVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASK 291
SVLS CA L SLD G+ +H + F V V + LI M+ KCG L IF+N K
Sbjct: 237 SVLSSCALLGSLDLGKWIHEYAKKHGFCKYVKVNTALIDMFAKCGSLDDAVSIFENMRYK 296
Query: 292 DIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIF 351
D W+++I YA +G E S+ +F M S V PD++T +G+L+ACS+TG V+EGRE F
Sbjct: 297 DTQAWSAMIVAYANHGQAENSMLMFERMRSENVQPDEITFLGLLNACSHTGLVEEGREYF 356
Query: 352 ESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMK 411
M ++ + P +HY MVDLLGRAG +EDA + I+ +P P ++W LL AC +H
Sbjct: 357 SWMVHEFGIVPSIKHYGSMVDLLGRAGHLEDAYEFIDKLPISPTPMLWRILLAACSSHNN 416
Query: 412 LDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIE 471
L+LAE ++++L+L+ + G Y++LSN+YA ++ V LRK M+ R +K PGCS IE
Sbjct: 417 LELAEKVSERILELDDSHGGDYVILSNLYARNKKWEAVDSLRKVMKDRKAVKVPGCSSIE 476
Query: 472 VEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLH-DVDEEEKVHSLR 530
V VH F D V + R L+++ L+ AGY PD+S V+H D+ ++EK +LR
Sbjct: 477 VNNVVHEFFSGDGVKSAT-TKLHRALDEMVKELKLAGYVPDTSMVVHADMGDQEKEITLR 535
Query: 531 YHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFK 590
YHSEKLA+A+GL+ P G IRV+KNLRVC DCHSA KLIS + GR+++LRD RFHHF+
Sbjct: 536 YHSEKLAIAFGLLNTPPGTTIRVVKNLRVCRDCHSAAKLISLIFGRKVVLRDVQRFHHFE 595
Query: 591 DGLCSCRDYW 600
DG CSCRD+W
Sbjct: 596 DGKCSCRDFW 605
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 95/200 (47%), Gaps = 12/200 (6%)
Query: 34 EKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDE 93
+ NV ++ + +D AR +FD + E VV M+ GY + R +E +F E
Sbjct: 163 DDNVYVCPTLINMYTECEDVDAARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFRE 222
Query: 94 MPKKNV----ISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSW----TAMLMGYTQCGR 145
M KN+ I+ +++S +D+ + + E + + TA++ + +CG
Sbjct: 223 MQGKNLKPNEITLLSVLSSCALLGSLDLGKWIHEYAKKHGFCKYVKVNTALIDMFAKCGS 282
Query: 146 IQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMR----EKDDATWSGMIKV 201
+ DA +F+ M K A ++MI+ +G+ + + ++F++MR + D+ T+ G++
Sbjct: 283 LDDAVSIFENMRYKDTQAWSAMIVAYANHGQAENSMLMFERMRSENVQPDEITFLGLLNA 342
Query: 202 YERKGYELEVIDLFTLMQKE 221
G E + F+ M E
Sbjct: 343 CSHTGLVEEGREYFSWMVHE 362
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 112/299 (37%), Gaps = 82/299 (27%)
Query: 38 VSWTVMLGGFIRDSRIDD----ARRLFDMMPEKDVVAQTNMVLGYCQDGR---------- 83
VS+ L F +S + AR LFD M E D+V ++ GY +
Sbjct: 62 VSFNTKLINFCTESPTESSMSYARHLFDAMSEPDIVIFNSIARGYSRSTNPLEVFNLFVE 121
Query: 84 -------------------------VDEGREIFDEMPK----KNVISWTTMISGYVNNNR 114
++EGR++ K NV T+I+ Y
Sbjct: 122 ILEDDLLPDNYTFPSLLKACAVAKALEEGRQLHCLSMKLGVDDNVYVCPTLINMYTECED 181
Query: 115 IDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSV---------VASN 165
+D AR +F+ + E V + AM+ GY + R +A LF+ M K++ V S+
Sbjct: 182 VDAARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKNLKPNEITLLSVLSS 241
Query: 166 SMILG------------------------------LGQNGEVQKARVVFDQMREKDDATW 195
+LG + G + A +F+ MR KD W
Sbjct: 242 CALLGSLDLGKWIHEYAKKHGFCKYVKVNTALIDMFAKCGSLDDAVSIFENMRYKDTQAW 301
Query: 196 SGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLV 254
S MI Y G + +F M+ E V+ + + + +L+ C+ ++ GR+ + +V
Sbjct: 302 SAMIVAYANHGQAENSMLMFERMRSENVQPDEITFLGLLNACSHTGLVEEGREYFSWMV 360
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 91/204 (44%), Gaps = 21/204 (10%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKN----------VVSWTVMLGGFIRDSR 52
E VV + AM+ GY EA +LF +M KN V+S +LG
Sbjct: 194 EPCVVCYNAMITGYARRNRPNEALSLFREMQGKNLKPNEITLLSVLSSCALLGSLDLGKW 253
Query: 53 IDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
I + + K V T ++ + + G +D+ IF+ M K+ +W+ MI Y N+
Sbjct: 254 IHEYAKKHGFC--KYVKVNTALIDMFAKCGSLDDAVSIFENMRYKDTQAWSAMIVAYANH 311
Query: 113 NRIDVARKLFEVMPEKN----EVSWTAMLMGYTQCGRIQDAWELFKAMP-----MKSVVA 163
+ + + +FE M +N E+++ +L + G +++ E F M + S+
Sbjct: 312 GQAENSMLMFERMRSENVQPDEITFLGLLNACSHTGLVEEGREYFSWMVHEFGIVPSIKH 371
Query: 164 SNSMILGLGQNGEVQKARVVFDQM 187
SM+ LG+ G ++ A D++
Sbjct: 372 YGSMVDLLGRAGHLEDAYEFIDKL 395
Score = 42.7 bits (99), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 46/232 (19%), Positives = 93/232 (40%), Gaps = 35/232 (15%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVV 69
TA++ + + G + +A ++F M K+ +W+ M+ + + +++ +F+ M ++V
Sbjct: 271 TALIDMFAKCGSLDDAVSIFENMRYKDTQAWSAMIVAYANHGQAENSMLMFERMRSENVQ 330
Query: 70 AQTNMVLGY----CQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVM 125
LG G V+EGRE F SW F ++
Sbjct: 331 PDEITFLGLLNACSHTGLVEEGREYF---------SWMV---------------HEFGIV 366
Query: 126 PEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMIL-GLGQNGEVQKARVVF 184
P L+G + G ++DA+E +P+ ++L + ++ A V
Sbjct: 367 PSIKHYGSMVDLLG--RAGHLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLELAEKVS 424
Query: 185 DQMREKDDATWSGMI---KVYERKGYELEVIDLFTLMQKEGVRVNFPSLISV 233
+++ E DD+ + +Y R + E +D + K+ V P S+
Sbjct: 425 ERILELDDSHGGDYVILSNLYARNK-KWEAVDSLRKVMKDRKAVKVPGCSSI 475
>gi|225428647|ref|XP_002281535.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic [Vitis vinifera]
gi|297741370|emb|CBI32501.3| unnamed protein product [Vitis vinifera]
Length = 697
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 215/645 (33%), Positives = 351/645 (54%), Gaps = 49/645 (7%)
Query: 4 RNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMM 63
N +++ YV G++ +A +F P KNVVSWT+++ G ++ +A +F M
Sbjct: 54 HNTFLSNSLMNAYVYCGLLADAKQIFHHTPYKNVVSWTILISGLAKNDCFVEAIDVFREM 113
Query: 64 P----EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKK----NVISWTTMISGYVNNNRI 115
+ + V ++++ + G + + + + NV T ++ Y +
Sbjct: 114 IMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFEGNVFVETALVDMYSKFGCM 173
Query: 116 DVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMIL------ 169
VAR+LFE M E+N V+W A++ GY+ G ++A +LF M K ++ I+
Sbjct: 174 GVARQLFESMSERNVVTWNAIVSGYSDHGFSEEAIDLFNLMRRKGLLVDFYTIMSLIPAS 233
Query: 170 --------GLGQNGE-------------------------VQKARVVFDQMREKDDATWS 196
G G +G V A VF +M KD A W+
Sbjct: 234 LSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHNCVDDAHRVFSEMSVKDVAAWT 293
Query: 197 GMIKVYERKGYELEVIDLFT-LMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVR 255
M+ + + I F ++ + ++++ +L+ +LS C+ +L GR+VHA ++
Sbjct: 294 LMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIALMGILSSCSHSGALQQGRRVHALAIK 353
Query: 256 CQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKV 315
F +++V S +I MY CG L K F KD+V WN++I+G G G ++ +
Sbjct: 354 TCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDVVCWNAMIAGNGMNGYGTDAIDL 413
Query: 316 FHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLG 375
F +M SG+ PD+ T V VL ACS+ G V EG +IF M V P +HYAC++D+LG
Sbjct: 414 FLQMKGSGLDPDESTFVSVLYACSHAGMVYEGLQIFYHMVKTSHVIPNLQHYACVIDILG 473
Query: 376 RAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYIL 435
RAGQ++ A I MPF+PD ++ +LLGACR H + L ++K+ ++EP +AG Y+L
Sbjct: 474 RAGQLDAAYSFINNMPFQPDFDVYSTLLGACRIHGNIKLGHEISQKIFEMEPNDAGYYVL 533
Query: 436 LSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMR 495
LSN+YA G + V R ++R + + K PG S IE+ ++++ F + HP++ I
Sbjct: 534 LSNMYALAGNWEGVKMTRASLRSKRMKKDPGFSSIEINQEIYTFMAGE-KDHPQYFKIEG 592
Query: 496 MLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMK 555
+L+ + +++AGY P+++ +L DV ++ K L +HSEK+A+A+GL++ IR+ K
Sbjct: 593 ILKGLILKIKKAGYVPNTNVLLQDVSDDMKKDILYHHSEKMAIAFGLMRTKPETIIRITK 652
Query: 556 NLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
NLR C DCH+A K +SKV GR ++++DANRFH F+DG+CSCRDYW
Sbjct: 653 NLRTCDDCHTASKFVSKVFGRVLVIKDANRFHVFQDGVCSCRDYW 697
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 129/284 (45%), Gaps = 41/284 (14%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVS--WTVM--------------- 43
M ERNVV+W A+V GY + G EA LF M K ++ +T+M
Sbjct: 183 MSERNVVTWNAIVSGYSDHGFSEEAIDLFNLMRRKGLLVDFYTIMSLIPASLSVGCLQVG 242
Query: 44 --LGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVIS 101
+ GFI + ++ + + +T ++ Y VD+ +F EM K+V +
Sbjct: 243 TGIHGFIIRTGYENDKHI-----------KTALMDIYVSHNCVDDAHRVFSEMSVKDVAA 291
Query: 102 WTTMISGYVNNNRIDVARKLFEVMP-----EKNEVSWTAMLMGYTQCGRIQDAWELFKAM 156
WT M++G+ + D A K F M + + ++ +L + G +Q + A+
Sbjct: 292 WTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIALMGILSSCSHSGALQQGRRV-HAL 350
Query: 157 PMKSVVASN----SMILGLGQN-GEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEV 211
+K+ A+N S ++ + N G ++ A+ F M EKD W+ MI GY +
Sbjct: 351 AIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDVVCWNAMIAGNGMNGYGTDA 410
Query: 212 IDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVR 255
IDLF M+ G+ + + +SVL C+ + G Q+ +V+
Sbjct: 411 IDLFLQMKGSGLDPDESTFVSVLYACSHAGMVYEGLQIFYHMVK 454
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 84/180 (46%), Gaps = 12/180 (6%)
Query: 235 SVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIV 294
S+ L L +Q+HAQ++ + ++++ L+ Y+ CG L K IF + K++V
Sbjct: 29 SILRKLKDLKPLQQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPYKNVV 88
Query: 295 MWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIF--- 351
W +ISG A+ +++ VF EM P+ VT+ VL A + G ++ + +
Sbjct: 89 SWTILISGLAKNDCFVEAIDVFREMIMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFW 148
Query: 352 --ESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTH 409
+ VE +VD+ + G + A +L E+M E + + W +++ H
Sbjct: 149 VRGGFEGNVFVE------TALVDMYSKFGCMGVARQLFESMS-ERNVVTWNAIVSGYSDH 201
>gi|357485423|ref|XP_003612999.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355514334|gb|AES95957.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 676
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 225/641 (35%), Positives = 355/641 (55%), Gaps = 57/641 (8%)
Query: 12 MVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMM------PE 65
++ GY++ +ITEA LF +MP +++V+W M+ + + +A L+D M P+
Sbjct: 41 LIDGYIKCSVITEARKLFDEMPNRHIVTWNSMISSHVSRGKTKEAIELYDNMLFEGVLPD 100
Query: 66 ----------------------------------KDVVAQTNMVLGYCQDGRVDEGREIF 91
D T +V Y + G++ + R +F
Sbjct: 101 AYTFSAIFKAFSEMGVSREGQKAHGLAVVLGFEVSDGFVATGIVDMYAKFGKMKDARFVF 160
Query: 92 DEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMP----EKNEVSWTAMLMGYTQCGRIQ 147
D + K+V+ +T +I GY A ++FE M + NE + ++L+ CG +
Sbjct: 161 DRVLDKDVVLFTALIVGYNQRGLDGEALEVFEDMVGSRIKPNEYTLASVLV---SCGNLG 217
Query: 148 D--AWELFKAMPMKS----VVASNSMILGL-GQNGEVQKARVVFDQMREKDDATWSGMIK 200
D +L + +KS VVAS + +L + + V+ + VF+ + TW+ I
Sbjct: 218 DLVNGKLIHGLVVKSGLESVVASQTSLLTMYSKCNMVEDSIKVFNSLAYASHVTWTSFIV 277
Query: 201 VYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDV 260
+ G E + +F M + + N + S+L C+SLA L+ G Q+HA V+ D
Sbjct: 278 GLVQNGREEIALSMFREMIRCSISPNHFTFSSILHACSSLAMLEAGEQIHAVTVKLGVDG 337
Query: 261 DVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMF 320
+ YV + LI +Y KCG + K + +F++ D+V N++I YAQ G G ++L++F M
Sbjct: 338 NKYVDAALIHLYGKCGNVEKARSVFESLTELDVVSINTMIYAYAQNGFGHEALELFERMK 397
Query: 321 SSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQV 380
G P+ VT + +L AC+ G V+EG +IF +++ + +E +HY CM+DLLGRA +
Sbjct: 398 KLGHKPNVVTFISILLACNNAGLVEEGCQIFSLIRNNHSIELTRDHYTCMIDLLGRAKRF 457
Query: 381 EDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIY 440
E+A LIE PD I W +LL AC+ H ++++AE KK+L P++ G +ILL+NIY
Sbjct: 458 EEAAMLIEEGK-NPDVIQWRTLLNACKIHGEVEMAEKFMKKMLDQAPRDGGTHILLTNIY 516
Query: 441 ASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKI 500
AS G++ +V E++ R + K P SW++++++VH F D +SHP I ML ++
Sbjct: 517 ASAGKWDNVIEMKSAGRDLRLKKTPAMSWVDIDREVHTFMAGD-LSHPRAHEISEMLHEL 575
Query: 501 GGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKL-PEGVPIRVMKNLRV 559
+ GY PD+ FVL D++EE+K+ +L YHSEKLA+A+ L K + IR+ KNLRV
Sbjct: 576 IEKVITLGYNPDTKFVLQDLEEEKKISALYYHSEKLAIAFALWKTCGKNTAIRIFKNLRV 635
Query: 560 CGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
CGDCHS IK +S + GR+II RDA RFHHFK G+CSC+DYW
Sbjct: 636 CGDCHSWIKFVSLLTGRDIIARDAKRFHHFKGGICSCKDYW 676
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 89/178 (50%), Gaps = 7/178 (3%)
Query: 227 FPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFD 286
+ SLI+ + SL +L + +H +++ + + LI YIKC + + + +FD
Sbjct: 4 YTSLIAQFTNKKSLTTL---KSLHTHILKSG-SLFSFFGHKLIDGYIKCSVITEARKLFD 59
Query: 287 NFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKE 346
++ IV WNS+IS + G +++++++ M GV+PD T + A S G +E
Sbjct: 60 EMPNRHIVTWNSMISSHVSRGKTKEAIELYDNMLFEGVLPDAYTFSAIFKAFSEMGVSRE 119
Query: 347 GREIFESMKSKYLVEPKTEHYAC-MVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
G++ + E A +VD+ + G+++DA + + + D +++ +L+
Sbjct: 120 GQKA-HGLAVVLGFEVSDGFVATGIVDMYAKFGKMKDA-RFVFDRVLDKDVVLFTALI 175
>gi|222624541|gb|EEE58673.1| hypothetical protein OsJ_10095 [Oryza sativa Japonica Group]
Length = 669
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 202/515 (39%), Positives = 302/515 (58%), Gaps = 12/515 (2%)
Query: 87 GREIFDEMPK----KNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQ 142
GR+I + NV + IS Y R D A ++FE M ++ VSW AM+ G+
Sbjct: 31 GRQIHSSTARLGLDGNVFVAHSAISMYARCGRPDDAYQMFEEMQYRDVVSWNAMISGFAH 90
Query: 143 CGRIQDAWELFKAM-------PMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATW 195
G A ++F+ + P +AS +G + ++ + VFD+MR K +W
Sbjct: 91 AGLFGRAMDVFRELVALQCPKPDAGTMASILPSMGKARVEDIALLKGVFDEMRFKGLISW 150
Query: 196 SGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVR 255
+ M+ VY +E ++LF MQK+G+ + +L +VL C +++L G+++H + R
Sbjct: 151 NAMLAVYTNNEMHVEAVELFMRMQKDGIEPDAVTLATVLPSCGEVSALSLGKRIHEVIKR 210
Query: 256 CQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKV 315
+ + + + L+ MY CG L + + +FD+ ++D+V W SIIS Y ++G G +++ +
Sbjct: 211 RRMCSSMLLENALMDMYANCGCLKEARDVFDSMGTRDVVSWTSIISAYGRHGHGREAIDL 270
Query: 316 FHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLG 375
F +M G+ PD + V +L+ACS+ G + G+ F SM S++ + PK EHYACMVDLLG
Sbjct: 271 FEKMCGQGLEPDSIAFVAILAACSHAGLLDMGKHYFYSMTSEFHIAPKLEHYACMVDLLG 330
Query: 376 RAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYIL 435
RAG + +A I MP +P+ +WG+LLGACR H +D+ +AA LL+L PK G Y+L
Sbjct: 331 RAGCIREAYDFIMVMPIKPNERVWGALLGACRIHSNMDIGLLAADSLLRLAPKQTGYYVL 390
Query: 436 LSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMR 495
LSNIYA GR+ DV+ +R M + + K PG S E+ +VH F D SHP+ MI +
Sbjct: 391 LSNIYARAGRWADVSMVRSVMESKGIKKLPGVSNAELGDRVHTFHIGD-TSHPQSKMIYK 449
Query: 496 MLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMK 555
L ++ +RE GY P+ LHDV+EE+K L HSEKLA+A+ L+ G PIR+
Sbjct: 450 KLSELLRRIREMGYNPEVEATLHDVEEEDKEGHLSVHSEKLAIAFLLINTNPGTPIRITM 509
Query: 556 NLRVCGDCHSAIKLISKVMGREIILRDANRFHHFK 590
NLR C DCH A KLIS + GREIIL+D NR H+ K
Sbjct: 510 NLRTCSDCHHAAKLISTIAGREIILKDVNRIHYMK 544
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 121/260 (46%), Gaps = 17/260 (6%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMM- 63
NV + + Y G +A +F +M ++VVSW M+ GF A +F +
Sbjct: 46 NVFVAHSAISMYARCGRPDDAYQMFEEMQYRDVVSWNAMISGFAHAGLFGRAMDVFRELV 105
Query: 64 ------PEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDV 117
P+ +A +G + + + +FDEM K +ISW M++ Y NN
Sbjct: 106 ALQCPKPDAGTMASILPSMGKARVEDIALLKGVFDEMRFKGLISWNAMLAVYTNNEMHVE 165
Query: 118 ARKLFEVMPEKNEVSWTAMLMGYT--QCGRI------QDAWELFKAMPM-KSVVASNSMI 168
A +LF M +K+ + A+ + CG + + E+ K M S++ N+++
Sbjct: 166 AVELFMRM-QKDGIEPDAVTLATVLPSCGEVSALSLGKRIHEVIKRRRMCSSMLLENALM 224
Query: 169 LGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFP 228
G +++AR VFD M +D +W+ +I Y R G+ E IDLF M +G+ +
Sbjct: 225 DMYANCGCLKEARDVFDSMGTRDVVSWTSIISAYGRHGHGREAIDLFEKMCGQGLEPDSI 284
Query: 229 SLISVLSVCASLASLDHGRQ 248
+ +++L+ C+ LD G+
Sbjct: 285 AFVAILAACSHAGLLDMGKH 304
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 119/251 (47%), Gaps = 33/251 (13%)
Query: 237 CASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMW 296
CA+ L GRQ+H+ R D +V+VA I+MY +CG +F+ +D+V W
Sbjct: 22 CAATDGLVLGRQIHSSTARLGLDGNVFVAHSAISMYARCGRPDDAYQMFEEMQYRDVVSW 81
Query: 297 NSIISGYAQYGLGEKSLKVFHEMFS-SGVMPDDVTLVGVLSACSYTGKVKEG-----REI 350
N++ISG+A GL +++ VF E+ + PD T+ +L + GK + + +
Sbjct: 82 NAMISGFAHAGLFGRAMDVFRELVALQCPKPDAGTMASILPS---MGKARVEDIALLKGV 138
Query: 351 FESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMP---FEPDAIIWGSLLGACR 407
F+ M+ K L+ + M+ + +A++L M EPDA+ ++L +C
Sbjct: 139 FDEMRFKGLIS-----WNAMLAVYTNNEMHVEAVELFMRMQKDGIEPDAVTLATVLPSCG 193
Query: 408 THMKLDLA----EVAAKKLL--QLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNV 461
L L EV ++ + + +NA L ++YA+ G + ++ +M R+V
Sbjct: 194 EVSALSLGKRIHEVIKRRRMCSSMLLENA-----LMDMYANCGCLKEARDVFDSMGTRDV 248
Query: 462 IKPPGCSWIEV 472
+ SW +
Sbjct: 249 V-----SWTSI 254
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 91/194 (46%), Gaps = 17/194 (8%)
Query: 4 RNVVSWTAMVRGYVEEGMITEAGTLFWQMP----EKNVVSWTVMLGGFIRDSRIDDARRL 59
+ ++SW AM+ Y M EA LF +M E + V+ +L S + +R+
Sbjct: 145 KGLISWNAMLAVYTNNEMHVEAVELFMRMQKDGIEPDAVTLATVLPSCGEVSALSLGKRI 204
Query: 60 FDMMPEK----DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRI 115
+++ + ++ + ++ Y G + E R++FD M ++V+SWT++IS Y +
Sbjct: 205 HEVIKRRRMCSSMLLENALMDMYANCGCLKEARDVFDSMGTRDVVSWTSIISAYGRHGHG 264
Query: 116 DVARKLFEVMP----EKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASN-----S 166
A LFE M E + +++ A+L + G + F +M + +A
Sbjct: 265 REAIDLFEKMCGQGLEPDSIAFVAILAACSHAGLLDMGKHYFYSMTSEFHIAPKLEHYAC 324
Query: 167 MILGLGQNGEVQKA 180
M+ LG+ G +++A
Sbjct: 325 MVDLLGRAGCIREA 338
>gi|449434238|ref|XP_004134903.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 609
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 213/532 (40%), Positives = 306/532 (57%), Gaps = 32/532 (6%)
Query: 89 EIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQD 148
+IF+++ N+ +W TMI G+ + A +LF M + + +
Sbjct: 90 QIFNQIQAPNIFTWNTMIRGFAESENPSPAVELFSQMHAASSILPDTHTFPF-------- 141
Query: 149 AWELFKAMP----------MKSVVASNSM-ILGLGQN---------GEVQKARVVFDQMR 188
LFKA+ + SVV N L QN G + A VF+ M
Sbjct: 142 ---LFKAVAKLMDVSLGEGIHSVVVRNGFDSLRFVQNSLVHMYSVFGFAESAYQVFEIMS 198
Query: 189 EKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQ 248
+D W+ +I + G E + L+ M EGV + +++S+LS C L +L G +
Sbjct: 199 YRDRVAWNSVINGFALNGMPNEALTLYREMGSEGVEPDGFTMVSLLSACVELGALALGER 258
Query: 249 VHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGL 308
VH +V+ + + ++ L+ +Y KCG + +FD + +V W S+I G A GL
Sbjct: 259 VHMYMVKVGLVQNQHASNALLDLYSKCGNFRDAQKVFDEMEERSVVSWTSLIVGLAVNGL 318
Query: 309 GEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYA 368
G ++LK+F E+ G+ P ++T VGVL ACS+ G + EG F MK +Y + P+ EH+
Sbjct: 319 GNEALKLFGELERQGLKPSEITFVGVLYACSHCGMLDEGFNYFRRMKEEYGILPRIEHHG 378
Query: 369 CMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPK 428
CMVDLL RAG+V DA I MP P+A+IW +LLGAC H L+L EVA ++ +LE +
Sbjct: 379 CMVDLLCRAGKVGDAYDYIRNMPVPPNAVIWRTLLGACTIHGHLELGEVARAEIQRLEQR 438
Query: 429 NAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHP 488
++G ++LLSN+YAS+ R+ DV +RK M + V K PG S +E++ +V+ F D SHP
Sbjct: 439 HSGDFVLLSNLYASERRWLDVQNVRKIMLMKGVKKTPGYSLVELKNRVYEFIMGD-RSHP 497
Query: 489 EHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEG 548
+ ML KI LL+ GY P + VL D++EEEK +L +H+EK+A+A+ LV P G
Sbjct: 498 QSEETYAMLAKITQLLKIEGYVPRTVNVLADIEEEEKETALSHHTEKVAIAFMLVNTPPG 557
Query: 549 VPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
PIR+MKNLRVC DCH AIKLISKV REII+RD +RFHHFKDG CSC+DYW
Sbjct: 558 TPIRIMKNLRVCADCHLAIKLISKVFEREIIVRDRSRFHHFKDGSCSCKDYW 609
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 128/272 (47%), Gaps = 16/272 (5%)
Query: 143 CGRIQD------AWELFKAMPMKSVVASNSMILGL-GQNGEVQKARVVFDQMREKDDATW 195
CG Q A+ + +P ++ + +I L + + A +F+Q++ + TW
Sbjct: 44 CGSSQSKLKQIHAFSIRHGVPPQNPDFNKHLIFALVSLSAPMSFAAQIFNQIQAPNIFTW 103
Query: 196 SGMIKVYERKGYELEVIDLFTLMQKEGVRV----NFPSLISVLSVCASLASLDHGRQVHA 251
+ MI+ + ++LF+ M + FP L + A L + G +H+
Sbjct: 104 NTMIRGFAESENPSPAVELFSQMHAASSILPDTHTFPFLFKAV---AKLMDVSLGEGIHS 160
Query: 252 QLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEK 311
+VR FD +V + L+ MY G +F+ + +D V WNS+I+G+A G+ +
Sbjct: 161 VVVRNGFDSLRFVQNSLVHMYSVFGFAESAYQVFEIMSYRDRVAWNSVINGFALNGMPNE 220
Query: 312 SLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMV 371
+L ++ EM S GV PD T+V +LSAC G + G + M LV+ + A ++
Sbjct: 221 ALTLYREMGSEGVEPDGFTMVSLLSACVELGALALGERVHMYMVKVGLVQNQHASNA-LL 279
Query: 372 DLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
DL + G DA K+ + M E + W SL+
Sbjct: 280 DLYSKCGNFRDAQKVFDEME-ERSVVSWTSLI 310
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 115/263 (43%), Gaps = 25/263 (9%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQM-------PEKNVVSWTVMLGGFIRDSRIDDA- 56
N+ +W M+RG+ E + A LF QM P+ + + + D + +
Sbjct: 99 NIFTWNTMIRGFAESENPSPAVELFSQMHAASSILPDTHTFPFLFKAVAKLMDVSLGEGI 158
Query: 57 -----RRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVN 111
R FD + Q ++V Y G + ++F+ M ++ ++W ++I+G+
Sbjct: 159 HSVVVRNGFDSLR----FVQNSLVHMYSVFGFAESAYQVFEIMSYRDRVAWNSVINGFAL 214
Query: 112 NNRIDVARKLFEVMP----EKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVV----A 163
N + A L+ M E + + ++L + G + + M +V A
Sbjct: 215 NGMPNEALTLYREMGSEGVEPDGFTMVSLLSACVELGALALGERVHMYMVKVGLVQNQHA 274
Query: 164 SNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGV 223
SN+++ + G + A+ VFD+M E+ +W+ +I G E + LF ++++G+
Sbjct: 275 SNALLDLYSKCGNFRDAQKVFDEMEERSVVSWTSLIVGLAVNGLGNEALKLFGELERQGL 334
Query: 224 RVNFPSLISVLSVCASLASLDHG 246
+ + + + VL C+ LD G
Sbjct: 335 KPSEITFVGVLYACSHCGMLDEG 357
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 84/168 (50%), Gaps = 12/168 (7%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV----VSWTVMLGGFIRDSRIDDA 56
M R+ V+W +++ G+ GM EA TL+ +M + V + +L + +
Sbjct: 197 MSYRDRVAWNSVINGFALNGMPNEALTLYREMGSEGVEPDGFTMVSLLSACVELGALALG 256
Query: 57 RRLFDMMPEKDVVAQ---TNMVLG-YCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
R+ M + +V +N +L Y + G + +++FDEM +++V+SWT++I G N
Sbjct: 257 ERVHMYMVKVGLVQNQHASNALLDLYSKCGNFRDAQKVFDEMEERSVVSWTSLIVGLAVN 316
Query: 113 NRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAM 156
+ A KLF + + +E+++ +L + CG + + + F+ M
Sbjct: 317 GLGNEALKLFGELERQGLKPSEITFVGVLYACSHCGMLDEGFNYFRRM 364
Score = 43.5 bits (101), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 73/174 (41%), Gaps = 13/174 (7%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSR----IDDA 56
M ER+VVSWT+++ G G+ EA LF ++ + + + G + +D+
Sbjct: 298 MEERSVVSWTSLIVGLAVNGLGNEALKLFGELERQGLKPSEITFVGVLYACSHCGMLDEG 357
Query: 57 RRLFDMMPEK-----DVVAQTNMVLGYCQDGRVDEGREIFDEMP-KKNVISWTTMISGYV 110
F M E+ + MV C+ G+V + + MP N + W T++
Sbjct: 358 FNYFRRMKEEYGILPRIEHHGCMVDLLCRAGKVGDAYDYIRNMPVPPNAVIWRTLLGACT 417
Query: 111 NNNRI---DVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSV 161
+ + +VAR + + +++ + + Y R D + K M MK V
Sbjct: 418 IHGHLELGEVARAEIQRLEQRHSGDFVLLSNLYASERRWLDVQNVRKIMLMKGV 471
>gi|224136143|ref|XP_002322250.1| predicted protein [Populus trichocarpa]
gi|222869246|gb|EEF06377.1| predicted protein [Populus trichocarpa]
Length = 548
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 190/522 (36%), Positives = 307/522 (58%), Gaps = 41/522 (7%)
Query: 118 ARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAM--------------------- 156
AR+LF+ MPE+N VSW ++ G G +A+ LF M
Sbjct: 29 ARRLFDEMPERNLVSWNTIISGLVDVGDFMEAFRLFLNMWEEFSDAGSFTFAVMIRASAG 88
Query: 157 ----PMKSVVASNSMILGLGQN--------------GEVQKARVVFDQMREKDDATWSGM 198
+ + + ++ +G+G + G ++ AR VF++M EK W+ +
Sbjct: 89 LELISIGRQLHACTLKMGIGDDIFVSCALIDMYSKCGSIEDARFVFEEMPEKTTVGWNTI 148
Query: 199 IKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQF 258
I Y GY E +D++ M+ GV+++ + ++ +CA LAS++H +Q HA L+R F
Sbjct: 149 IAGYALHGYSEEALDMYYEMRDSGVKMDHFTFSMIVRICARLASVEHAKQAHAALIRHGF 208
Query: 259 DVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHE 318
D+ + L+ Y K G + + +FD ASK+++ WN++I GY +G G +++++F +
Sbjct: 209 GSDIVANTALVDFYSKWGRIEDARHVFDKMASKNVISWNALIGGYGNHGRGSEAVELFEQ 268
Query: 319 MFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAG 378
M + P+ +T + VLSACS++G + G EIF+SM ++P+ HYACM++L+GR G
Sbjct: 269 MIQERMNPNHITFLAVLSACSHSGLSERGWEIFQSMGRDNRIKPRAMHYACMIELMGREG 328
Query: 379 QVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSN 438
+++A+ LI PF+P A +W +LL ACR + +L + AA+KL +EP YI+L N
Sbjct: 329 LLDEALALIRGAPFKPTANMWAALLTACRVNENFELGKFAAEKLYGMEPDKLNNYIVLLN 388
Query: 439 IYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLE 498
IY S G + A++ ++++ + P CSWIEV+++ H+F D HP+ I + ++
Sbjct: 389 IYNSAGNLKEAADVVHTLKRKGLRMRPVCSWIEVKRRPHVFLSGDN-RHPQRKEIYQKVD 447
Query: 499 KIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLR 558
K+ + + GY P+ +L DVDE+E+ L YHSEKLA+A+GL+ P P+++++ R
Sbjct: 448 KLMLEISKYGYVPNQKTLLPDVDEQEERVRL-YHSEKLAIAFGLISTPYWAPLQIVQGHR 506
Query: 559 VCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
+CGDCH AIKLI++V GREI++RDA RFHHFK G CSC DYW
Sbjct: 507 ICGDCHEAIKLIARVTGREIVIRDAGRFHHFKHGHCSCEDYW 548
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 88/407 (21%), Positives = 176/407 (43%), Gaps = 53/407 (13%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSR----IDDA 56
MPERN+VSW ++ G V+ G EA LF M E+ + + IR S I
Sbjct: 36 MPERNLVSWNTIISGLVDVGDFMEAFRLFLNMWEEFSDAGSFTFAVMIRASAGLELISIG 95
Query: 57 RRL----FDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
R+L M D+ ++ Y + G +++ R +F+EMP+K + W T+I+GY +
Sbjct: 96 RQLHACTLKMGIGDDIFVSCALIDMYSKCGSIEDARFVFEEMPEKTTVGWNTIIAGYALH 155
Query: 113 NRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAMPM----KSVVAS 164
+ A ++ M + + +++ ++ + ++ A + A+ +VA+
Sbjct: 156 GYSEEALDMYYEMRDSGVKMDHFTFSMIVRICARLASVEHAKQAHAALIRHGFGSDIVAN 215
Query: 165 NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVR 224
+++ + G ++ AR VFD+M K+ +W+ +I Y G E ++LF M +E +
Sbjct: 216 TALVDFYSKWGRIEDARHVFDKMASKNVISWNALIGGYGNHGRGSEAVELFEQMIQERMN 275
Query: 225 VNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLI 284
N + ++VLS C+ + G ++ + R
Sbjct: 276 PNHITFLAVLSACSHSGLSERGWEIFQSMGR----------------------------- 306
Query: 285 FDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKV 344
DN + + +I + GL +++L + + P +L+AC
Sbjct: 307 -DNRIKPRAMHYACMIELMGREGLLDEALALIR---GAPFKPTANMWAALLTACRVNENF 362
Query: 345 KEGREIFESMKSKYLVEP-KTEHYACMVDLLGRAGQVEDAMKLIEAM 390
+ G+ E + Y +EP K +Y ++++ AG +++A ++ +
Sbjct: 363 ELGKFAAEKL---YGMEPDKLNNYIVLLNIYNSAGNLKEAADVVHTL 406
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 73/152 (48%), Gaps = 2/152 (1%)
Query: 258 FDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFH 317
F+ D Y+ + ++ M++KCG ++ + +FD +++V WN+IISG G ++ ++F
Sbjct: 6 FEFDQYMRNRVLLMHVKCGMMIDARRLFDEMPERNLVSWNTIISGLVDVGDFMEAFRLFL 65
Query: 318 EMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRA 377
M+ T ++ A + + GR++ + K + ++D+ +
Sbjct: 66 NMWEEFSDAGSFTFAVMIRASAGLELISIGRQL-HACTLKMGIGDDIFVSCALIDMYSKC 124
Query: 378 GQVEDAMKLIEAMPFEPDAIIWGSLLGACRTH 409
G +EDA + E MP E + W +++ H
Sbjct: 125 GSIEDARFVFEEMP-EKTTVGWNTIIAGYALH 155
>gi|297839333|ref|XP_002887548.1| hypothetical protein ARALYDRAFT_339650 [Arabidopsis lyrata subsp.
lyrata]
gi|297333389|gb|EFH63807.1| hypothetical protein ARALYDRAFT_339650 [Arabidopsis lyrata subsp.
lyrata]
Length = 1221
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 219/609 (35%), Positives = 340/609 (55%), Gaps = 41/609 (6%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRID--DARR 58
PE + + +VRGY E + +F +M K + F+ + + R
Sbjct: 232 FPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFIFPDSFSFAFVVKAAANFRSLRT 291
Query: 59 LFDMMPE-------KDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVN 111
F M + + T ++ Y + G V R++FDEMP+ N+++W +++
Sbjct: 292 GFQMHCQALKHGLDSHLFVATTLIGMYGECGCVGFARKVFDEMPQPNLVAWNAVVTACFR 351
Query: 112 NNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGL 171
N + AR++F+ M +N SW ML GY + G ++ A +F MP + V+ ++MI+G
Sbjct: 352 GNDVSGAREIFDKMLVRNHTSWNVMLAGYIKAGELECAKRIFSEMPHRDDVSWSTMIVGF 411
Query: 172 GQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLI 231
NG ++ F RE L++ E +R N SL
Sbjct: 412 SHNGSFNES---FSYFRE---------------------------LLRAE-MRPNEVSLT 440
Query: 232 SVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASK 291
VLS C+ + + G+ +H + + + V V + LI MY +CG + +L+F+ K
Sbjct: 441 GVLSACSQSGAFEFGKTLHGFVEKSGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEK 500
Query: 292 -DIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREI 350
IV W S+I+G A +G GE+++++F+EM SGVMPD+++ + +L ACS+ G +KEG
Sbjct: 501 RSIVSWTSMIAGLAMHGHGEEAIRIFNEMTESGVMPDEISFISLLYACSHAGLIKEGEGY 560
Query: 351 FESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHM 410
F MK Y +EP EHY CMVDL GR+G+++ A I MP P AI+W +LLGAC +H
Sbjct: 561 FSKMKRVYHIEPAVEHYGCMVDLYGRSGKLQKAYSFICQMPIPPTAIVWRTLLGACSSHG 620
Query: 411 KLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWI 470
++LAE ++L +L+P N+G +LLSN+YA+ G++ DVA +RK+M + + K S +
Sbjct: 621 NIELAEQVKQRLNELDPNNSGDLVLLSNVYATAGKWKDVASIRKSMIVQRIKKITAWSLV 680
Query: 471 EVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLR 530
EV K ++ FT + + ++ E I L EAGY P+ + L+DV+EEEK +
Sbjct: 681 EVGKTMYKFTACEKKKEIDIEAHEKLKEIILRLRDEAGYAPEVASALYDVEEEEKEDQVS 740
Query: 531 YHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFK 590
HSEKLA+A+ L +LP+G IR++KNLR+C DCH+ +KL S+V G EI++RD NRFH FK
Sbjct: 741 KHSEKLALAFALARLPKGANIRIVKNLRICRDCHAVMKLTSRVYGVEIVIRDRNRFHSFK 800
Query: 591 DGLCSCRDY 599
DG CSC DY
Sbjct: 801 DGSCSCGDY 809
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 130/319 (40%), Gaps = 42/319 (13%)
Query: 112 NNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGL 171
++ + AR+L PE + + ++ GY++ ++ +F M K + +S
Sbjct: 219 SDALPYARRLLLCFPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFIFPDSFSFAF 278
Query: 172 GQNGEVQKARVVFDQMREKDD-----------------ATWSGMIKVYERKGYELEVIDL 214
V KA F +R T GM G+ +V D
Sbjct: 279 -----VVKAAANFRSLRTGFQMHCQALKHGLDSHLFVATTLIGMYGECGCVGFARKVFD- 332
Query: 215 FTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQ-LVRCQFDVDVYVASVLITMYI 273
E + N + +V++ C + R++ + LVR +V +A YI
Sbjct: 333 ------EMPQPNLVAWNAVVTACFRGNDVSGAREIFDKMLVRNHTSWNVMLAG-----YI 381
Query: 274 KCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVG 333
K GEL K IF +D V W+++I G++ G +S F E+ + + P++V+L G
Sbjct: 382 KAGELECAKRIFSEMPHRDDVSWSTMIVGFSHNGSFNESFSYFRELLRAEMRPNEVSLTG 441
Query: 334 VLSACSYTGKVKEGREI---FESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAM 390
VLSACS +G + G+ + E ++V ++D+ R G V A + E M
Sbjct: 442 VLSACSQSGAFEFGKTLHGFVEKSGYSWIVSVNN----ALIDMYSRCGNVPMARLVFEGM 497
Query: 391 PFEPDAIIWGSLLGACRTH 409
+ + W S++ H
Sbjct: 498 QEKRSIVSWTSMIAGLAMH 516
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 78/176 (44%), Gaps = 14/176 (7%)
Query: 237 CASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDN-----FASK 291
C +L +L Q+H ++ D D Y LI + C + L + F
Sbjct: 182 CKNLRALT---QIHGFFIKSGVDTDSYFIGKLI---LHCAISISDALPYARRLLLCFPEP 235
Query: 292 DIVMWNSIISGYAQYGLGEKSLKVFHEMFSSG-VMPDDVTLVGVLSACSYTGKVKEGREI 350
D M+N+++ GY++ S+ VF EM G + PD + V+ A + ++ G ++
Sbjct: 236 DAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFIFPDSFSFAFVVKAAANFRSLRTGFQM 295
Query: 351 FESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGAC 406
K+ ++ ++ + G G V A K+ + MP +P+ + W +++ AC
Sbjct: 296 -HCQALKHGLDSHLFVATTLIGMYGECGCVGFARKVFDEMP-QPNLVAWNAVVTAC 349
>gi|2244842|emb|CAB10264.1| hypothetical protein [Arabidopsis thaliana]
gi|7268231|emb|CAB78527.1| hypothetical protein [Arabidopsis thaliana]
Length = 587
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 216/604 (35%), Positives = 333/604 (55%), Gaps = 40/604 (6%)
Query: 2 PERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTV-MLGGFIRDSRIDDARRLF 60
P RNVVSWT+++ G + G + A F++M + V S + + G I + R L
Sbjct: 19 PARNVVSWTSLISGLAQNGHFSTALVEFFEMRREAVASLRLPVTGKQIHALAVKCGRIL- 77
Query: 61 DMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARK 120
DV + YC+ D+ R++FDE+P++N+ +W IS V + R A +
Sbjct: 78 ------DVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIE 131
Query: 121 LF----EVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGE 176
F + N +++ A L + D L M + +V + G +
Sbjct: 132 AFIEFRRIDGHPNSITFCAFLNACS------DWLHLNLGMQLHGLVLRS----GFDTDVS 181
Query: 177 VQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSV 236
++ + ++F +M K+ +W ++ Y + + + L+ +K+ V + + SVLS
Sbjct: 182 IRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSA 241
Query: 237 CASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMW 296
CA +A L+ GR +HA V+ + ++V S L+ MY KCG + + FD K++V
Sbjct: 242 CAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTR 301
Query: 297 NSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKS 356
NS+I GYA G + +L +F EM G G V+ G +IF+SM+S
Sbjct: 302 NSLIGGYAHQGQVDMALALFEEMAPRGC-----------------GAVENGMKIFDSMRS 344
Query: 357 KYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAE 416
Y +EP EHY+C+VD+LGRAG VE A + I+ MP +P +WG+L ACR H K L
Sbjct: 345 TYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGL 404
Query: 417 VAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKV 476
+AA+ L +L+PK++G ++LLSN +A+ GR+ + +R+ ++ + K G SWI V+ +V
Sbjct: 405 LAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWITVKNQV 464
Query: 477 HMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKL 536
H F +D SH + I L K+ + AGY PD L+D++EEEK + +HSEKL
Sbjct: 465 HAFQAKD-RSHILNKEIQTTLAKLRNEMEAAGYKPDLKLSLYDLEEEEKAAEVSHHSEKL 523
Query: 537 AVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSC 596
A+A+GL+ LP VPIR+ KNLR+CGDCHS K +S + REII+RD NRFH FKDG+CSC
Sbjct: 524 ALAFGLLSLPLSVPIRITKNLRICGDCHSFFKFVSGSVKREIIVRDNNRFHRFKDGICSC 583
Query: 597 RDYW 600
+DYW
Sbjct: 584 KDYW 587
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 102/251 (40%), Gaps = 47/251 (18%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
+PERN+ +W A + V +G EA F + + ++ F+ + D L
Sbjct: 105 IPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFL--NACSDWLHLN 162
Query: 61 DMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARK 120
M +V ++ G+ D + IF EM KN +SW ++++ YV N+ + A
Sbjct: 163 LGMQLHGLVLRS----GFDTDVSIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASV 218
Query: 121 LF---------------------------------------EVMPEKNEVSWTAMLMGYT 141
L+ + E+ +A++ Y
Sbjct: 219 LYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYG 278
Query: 142 QCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKV 201
+CG I+D+ + F MP K++V NS+I G G+V A +F++M + +K+
Sbjct: 279 KCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGAVENGMKI 338
Query: 202 YE--RKGYELE 210
++ R Y +E
Sbjct: 339 FDSMRSTYGIE 349
>gi|238478502|ref|NP_173097.2| PPR repeat domain-containing protein [Arabidopsis thaliana]
gi|332191338|gb|AEE29459.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
Length = 937
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 215/641 (33%), Positives = 342/641 (53%), Gaps = 53/641 (8%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMM--PEKD 67
++R Y G EA +F QMP K+++SW ++ F+ D R DA L M K
Sbjct: 300 NTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKS 359
Query: 68 VVAQT-------------------------------NMVLG------YCQDGRVDEGREI 90
V T N ++G Y + G + E R +
Sbjct: 360 VNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRV 419
Query: 91 FDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMP-EKNEVSWTAMLMGYTQCGRIQDA 149
+MP+++V++W +I GY + D A F+ M E ++ ++ + C D
Sbjct: 420 LLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDL 479
Query: 150 WELFKAMPMKSVVAS----------NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMI 199
E + P+ + + S NS+I + G++ ++ +F+ + ++ TW+ M+
Sbjct: 480 LE--RGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAML 537
Query: 200 KVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFD 259
G+ EV+ L + M+ GV ++ S LS A LA L+ G+Q+H V+ F+
Sbjct: 538 AANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFE 597
Query: 260 VDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEM 319
D ++ + MY KCGE+ + + ++ + WN +IS ++G E+ FHEM
Sbjct: 598 HDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEM 657
Query: 320 FSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQ 379
G+ P VT V +L+ACS+ G V +G ++ + + +EP EH C++DLLGR+G+
Sbjct: 658 LEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGR 717
Query: 380 VEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNI 439
+ +A I MP +P+ ++W SLL +C+ H LD AA+ L +LEP++ Y+L SN+
Sbjct: 718 LAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNM 777
Query: 440 YASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEK 499
+A+ GR+ DV +RK M +N+ K CSW++++ KV F D +HP+ I LE
Sbjct: 778 FATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGD-RTHPQTMEIYAKLED 836
Query: 500 IGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRV 559
I L++E+GY D+S L D DEE+K H+L HSE+LA+AY L+ PEG +R+ KNLR+
Sbjct: 837 IKKLIKESGYVADTSQALQDTDEEQKEHNLWNHSERLALAYALMSTPEGSTVRIFKNLRI 896
Query: 560 CGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
C DCHS K +S+V+GR I+LRD RFHHF+ GLCSC+DYW
Sbjct: 897 CSDCHSVYKFVSRVIGRRIVLRDQYRFHHFERGLCSCKDYW 937
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 119/443 (26%), Positives = 207/443 (46%), Gaps = 60/443 (13%)
Query: 16 YVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMM------PEKDVV 69
Y + G + A LF MP +N VSW M+ G +R + F M P V+
Sbjct: 2 YTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVI 61
Query: 70 AQTNMVLGYCQDGRV-DEGREIFDEMPKKNVIS----WTTMISGYVNNNRIDVARKLFEV 124
A ++V + G + EG ++ + K ++S T ++ Y + +RK+FE
Sbjct: 62 A--SLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEE 119
Query: 125 MPEKNEVSWTAMLMGYTQCGRIQDAWELFKAM----------PMKSVVAS---------- 164
MP++N VSWT++++GY+ G ++ +++K M M V++S
Sbjct: 120 MPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLG 179
Query: 165 -------------------NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERK 205
NS+I LG G V A +FDQM E+D +W+ + Y +
Sbjct: 180 RQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQN 239
Query: 206 GYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDH---GRQVHAQLVRCQFDVDV 262
G+ E +F+LM++ VN ++ ++LSV L +DH GR +H +V+ FD V
Sbjct: 240 GHIEESFRIFSLMRRFHDEVNSTTVSTLLSV---LGHVDHQKWGRGIHGLVVKMGFDSVV 296
Query: 263 YVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSS 322
V + L+ MY G V+ L+F +KD++ WNS+++ + G +L + M SS
Sbjct: 297 CVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISS 356
Query: 323 GVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVED 382
G + VT L+AC ++GR + + L + A +V + G+ G++ +
Sbjct: 357 GKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNA-LVSMYGKIGEMSE 415
Query: 383 AMKLIEAMPFEPDAIIWGSLLGA 405
+ +++ MP D + W +L+G
Sbjct: 416 SRRVLLQMP-RRDVVAWNALIGG 437
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 106/427 (24%), Positives = 196/427 (45%), Gaps = 21/427 (4%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMP------EKNVVSWTVMLGGFIRDSRID 54
MP+RNVVSWT+++ GY ++G E ++ M +N +S + G ++D +
Sbjct: 120 MPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESL- 178
Query: 55 DARRLFDMMP----EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYV 110
R++ + E + + +++ G VD IFD+M +++ ISW ++ + Y
Sbjct: 179 -GRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYA 237
Query: 111 NNNRIDVARKLFEVMPE-KNEVSWTAMLMGYTQCGRI-QDAWE-----LFKAMPMKSVV- 162
N I+ + ++F +M +EV+ T + + G + W L M SVV
Sbjct: 238 QNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVC 297
Query: 163 ASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEG 222
N+++ G +A +VF QM KD +W+ ++ + G L+ + L M G
Sbjct: 298 VCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSG 357
Query: 223 VRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGK 282
VN+ + S L+ C + + GR +H +V + + + L++MY K GE+ + +
Sbjct: 358 KSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESR 417
Query: 283 LIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTG 342
+ +D+V WN++I GYA+ +K+L F M GV + +T+V VLSAC G
Sbjct: 418 RVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPG 477
Query: 343 KVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSL 402
+ E + + E ++ + + G + + L + + I W ++
Sbjct: 478 DLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLD-NRNIITWNAM 536
Query: 403 LGACRTH 409
L A H
Sbjct: 537 LAANAHH 543
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 68/134 (50%), Gaps = 3/134 (2%)
Query: 271 MYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVT 330
MY K G + + +FD ++ V WN+++SG + GL + ++ F +M G+ P
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60
Query: 331 LVGVLSACSYTGKV-KEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEA 389
+ +++AC +G + +EG ++ + L+ A ++ L G G V + K+ E
Sbjct: 61 IASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTA-ILHLYGVYGLVSCSRKVFEE 119
Query: 390 MPFEPDAIIWGSLL 403
MP + + + W SL+
Sbjct: 120 MP-DRNVVSWTSLM 132
>gi|297597505|ref|NP_001044065.2| Os01g0715700 [Oryza sativa Japonica Group]
gi|255673627|dbj|BAF05979.2| Os01g0715700 [Oryza sativa Japonica Group]
Length = 699
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 197/441 (44%), Positives = 267/441 (60%), Gaps = 3/441 (0%)
Query: 161 VVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQK 220
VV +M+ L GE AR +FD M ++D W+ MI Y G E + LF M+
Sbjct: 261 VVCVTAMVGALATGGEADAARELFDGMPQRDHVAWNAMIAGYVHTGRSREALRLFDEMRH 320
Query: 221 EGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVK 280
G V +L+S L+ CA L +L+ G+ VH+ + V + + LI MY KCG +
Sbjct: 321 AGAAVGEVTLVSALTACAQLGALERGKWVHSCAHSRGMRLSVTLGTALIDMYSKCGAVAA 380
Query: 281 GKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSY 340
+FD+ +++ W S +SG A G+G L +F M S+GV P+ VT V VL CS
Sbjct: 381 AMEVFDSMGERNVYTWTSAVSGLAMNGMGRDCLALFKRMESTGVEPNGVTFVVVLRGCSM 440
Query: 341 TGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWG 400
G V EGR F+SMKS + ++P EHY CMVDL GRAG+++DA+ I MP EP +WG
Sbjct: 441 AGLVDEGRACFDSMKSNHGIDPWLEHYGCMVDLYGRAGRLDDAVNFINGMPLEPHEGVWG 500
Query: 401 SLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRN 460
+LL A R H ++L + A KL+ +E KN ++LLSNIYA + V+ +R M+ +
Sbjct: 501 ALLNASRIHKNVELGKYAMDKLMAIESKNDAAHVLLSNIYADSQNWKGVSNVRNMMKAKG 560
Query: 461 VIKPPGCSWIEVEKKVH-MFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHD 519
V K PGCS IEV KVH F G +HP H I ML ++ LR GY ++ VL D
Sbjct: 561 VKKVPGCSAIEVGGKVHEFFVGGK--THPRHKEIEMMLAEMNQRLRLQGYIANTKEVLFD 618
Query: 520 VDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREII 579
++EE+K ++ HSEKLA+A+GLV LPE + IR++KNLRVC DCH K+ISKV REI+
Sbjct: 619 IEEEDKEDAISLHSEKLAIAFGLVALPEDMEIRIVKNLRVCEDCHDYTKMISKVFNREIV 678
Query: 580 LRDANRFHHFKDGLCSCRDYW 600
+RD NRFHHFKDG CSC+DYW
Sbjct: 679 MRDRNRFHHFKDGACSCKDYW 699
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 99/222 (44%), Gaps = 11/222 (4%)
Query: 67 DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMP 126
DVV T MV G D RE+FD MP+++ ++W MI+GYV+ R A +LF+ M
Sbjct: 260 DVVCVTAMVGALATGGEADAARELFDGMPQRDHVAWNAMIAGYVHTGRSREALRLFDEMR 319
Query: 127 EK----NEVSWTAMLMGYTQCGRIQDAWELFKAMPMK----SVVASNSMILGLGQNGEVQ 178
EV+ + L Q G ++ + + SV ++I + G V
Sbjct: 320 HAGAAVGEVTLVSALTACAQLGALERGKWVHSCAHSRGMRLSVTLGTALIDMYSKCGAVA 379
Query: 179 KARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCA 238
A VFD M E++ TW+ + G + + LF M+ GV N + + VL C+
Sbjct: 380 AAMEVFDSMGERNVYTWTSAVSGLAMNGMGRDCLALFKRMESTGVEPNGVTFVVVLRGCS 439
Query: 239 SLASLDHGRQVHAQLVRCQFDVDVYVA--SVLITMYIKCGEL 278
+D GR + + +D ++ ++ +Y + G L
Sbjct: 440 MAGLVDEGRACFDSM-KSNHGIDPWLEHYGCMVDLYGRAGRL 480
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 100/234 (42%), Gaps = 17/234 (7%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMP 64
+VV TAMV G A LF MP+++ V+W M+ G++ R +A RLFD M
Sbjct: 260 DVVCVTAMVGALATGGEADAARELFDGMPQRDHVAWNAMIAGYVHTGRSREALRLFDEMR 319
Query: 65 EKD-VVAQTNMV--LGYC-QDGRVDEGREIFDEMPKK----NVISWTTMISGYVNNNRID 116
V + +V L C Q G ++ G+ + + +V T +I Y +
Sbjct: 320 HAGAAVGEVTLVSALTACAQLGALERGKWVHSCAHSRGMRLSVTLGTALIDMYSKCGAVA 379
Query: 117 VARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSV----VASNSMILGLG 172
A ++F+ M E+N +WT+ + G G +D LFK M V V ++ G
Sbjct: 380 AAMEVFDSMGERNVYTWTSAVSGLAMNGMGRDCLALFKRMESTGVEPNGVTFVVVLRGCS 439
Query: 173 QNGEVQKARVVFDQMREKDD-----ATWSGMIKVYERKGYELEVIDLFTLMQKE 221
G V + R FD M+ + M+ +Y R G + ++ M E
Sbjct: 440 MAGLVDEGRACFDSMKSNHGIDPWLEHYGCMVDLYGRAGRLDDAVNFINGMPLE 493
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 73/170 (42%), Gaps = 16/170 (9%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEK----------NVVSWTVMLGGFIRD 50
MP+R+ V+W AM+ GYV G EA LF +M + ++ LG R
Sbjct: 287 MPQRDHVAWNAMIAGYVHTGRSREALRLFDEMRHAGAAVGEVTLVSALTACAQLGALERG 346
Query: 51 SRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYV 110
+ M V T ++ Y + G V E+FD M ++NV +WT+ +SG
Sbjct: 347 KWVHSCAHSRGM--RLSVTLGTALIDMYSKCGAVAAAMEVFDSMGERNVYTWTSAVSGLA 404
Query: 111 NNNRIDVARKLFEVMP----EKNEVSWTAMLMGYTQCGRIQDAWELFKAM 156
N LF+ M E N V++ +L G + G + + F +M
Sbjct: 405 MNGMGRDCLALFKRMESTGVEPNGVTFVVVLRGCSMAGLVDEGRACFDSM 454
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 81/185 (43%), Gaps = 33/185 (17%)
Query: 248 QVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDI-------------- 293
VHA +R D +V S ++MY G++ + F AS D+
Sbjct: 216 SVHASALRHGHAGDPHVQSGAVSMYAAAGDVGAARAAFAEIASPDVVCVTAMVGALATGG 275
Query: 294 -----------------VMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLS 336
V WN++I+GY G ++L++F EM +G +VTLV L+
Sbjct: 276 EADAARELFDGMPQRDHVAWNAMIAGYVHTGRSREALRLFDEMRHAGAAVGEVTLVSALT 335
Query: 337 ACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDA 396
AC+ G ++ G+ + S+ + T A ++D+ + G V AM++ ++M E +
Sbjct: 336 ACAQLGALERGKWVHSCAHSRGMRLSVTLGTA-LIDMYSKCGAVAAAMEVFDSMG-ERNV 393
Query: 397 IIWGS 401
W S
Sbjct: 394 YTWTS 398
>gi|449508249|ref|XP_004163262.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g33170-like [Cucumis sativus]
Length = 840
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 220/618 (35%), Positives = 337/618 (54%), Gaps = 55/618 (8%)
Query: 1 MPER-NVVSWTAMVRGYVEEGMITEAGTLFWQMP----EKNVVSWTVMLGGFIRDSRIDD 55
+P+R N V WTAM+ GY + G +A F +M E N ++ +L S
Sbjct: 195 LPDRKNYVQWTAMLTGYAQNGESLKAIQCFKEMRNQGMESNHFTFPSILTACTSISAYAF 254
Query: 56 ARRLFDMMP----EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVN 111
R++ + +V Q+ +V Y + G + R I D M +V+ W +MI G V
Sbjct: 255 GRQVHGCIIWSGFGPNVYVQSALVDMYAKCGDLASARMILDTMEIDDVVCWNSMIVGCVT 314
Query: 112 NNRIDVARKLFEVMPEKN----EVSWTAMLMGYTQCGRIQDAWELFKAMPMKS-----VV 162
+ ++ A LF M ++ + ++ ++L C ++ E ++ +K+
Sbjct: 315 HGYMEEALVLFHKMHNRDIRIDDFTYPSVLKSLASCKNLKIG-ESVHSLTIKTGFDACKT 373
Query: 163 ASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEG 222
SN+++ + G + A VF+++ +KD +W+ ++ Y G+ + + LF M+
Sbjct: 374 VSNALVDMYAKQGNLSCALDVFNKILDKDVISWTSLVTGYVHNGFHEKALQLFCDMRTAR 433
Query: 223 VRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGK 282
V ++ + V S CA L ++ GRQVHA ++ + + LITMY KCG L
Sbjct: 434 VDLDQFVVACVFSACAELTVIEFGRQVHANFIKSSAGSLLSAENSLITMYAKCGCLEDAI 493
Query: 283 LIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTG 342
+ D+ +++++ W +II GYAQ GL
Sbjct: 494 RVXDSMETRNVISWTAIIVGYAQNGL---------------------------------- 519
Query: 343 KVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSL 402
V+ G+ FESM+ Y ++P ++ YACM+DLLGRAG++ +A L+ M EPDA IW SL
Sbjct: 520 -VETGQSYFESMEKVYGIKPASDRYACMIDLLGRAGKINEAEHLLNRMDVEPDATIWKSL 578
Query: 403 LGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVI 462
L ACR H L+L E A K L++LEP N+ PY+LLSN+++ GR+ D A +R+ M+ +
Sbjct: 579 LSACRVHGNLELGERAGKNLIKLEPSNSLPYVLLSNMFSVAGRWEDAAHIRRAMKTMGIX 638
Query: 463 KPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDE 522
+ PG SWIE++ +VH F D SHP I ++++ L++EAG+ PD +F L D+DE
Sbjct: 639 QEPGYSWIEMKSQVHTFISED-RSHPLAAEIYSKIDEMMILIKEAGHVPDMNFALRDMDE 697
Query: 523 EEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRD 582
E K SL YHSEKLAVA+GL+ + +G PIR+ KNLRVCGDCHSA+K IS + R IILRD
Sbjct: 698 EAKERSLAYHSEKLAVAFGLLTVAKGAPIRIFKNLRVCGDCHSAMKYISSIFKRHIILRD 757
Query: 583 ANRFHHFKDGLCSCRDYW 600
N FHHF +G CSC D+W
Sbjct: 758 LNCFHHFIEGKCSCGDFW 775
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 106/401 (26%), Positives = 177/401 (44%), Gaps = 73/401 (18%)
Query: 43 MLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISW 102
+L ++ R+D+AR+LFD MP +D M+ Y G + E R++F+E P N I+W
Sbjct: 43 LLSELSKNGRVDEARKLFDQMPYRDKYTWNIMISAYANLGNLVEARKLFNETPIXNSITW 102
Query: 103 TTMISGYVNNN-RIDVARKL--------------------------------------FE 123
++++SGY N ++ R+ +
Sbjct: 103 SSLVSGYCKNGCEVEGLRQFSQMWSDGQKPSQYTLGSVLRACSTLSLLHTGKMIHCYAIK 162
Query: 124 VMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMP-MKSVVASNSMILGLGQNGEVQKARV 182
+ E N T ++ Y++C + +A LF ++P K+ V +M+ G QNGE KA
Sbjct: 163 IQLEANIFVATGLVDMYSKCKCLLEAEYLFFSLPDRKNYVQWTAMLTGYAQNGESLKAIQ 222
Query: 183 VFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLAS 242
F +MR +G+ N + S+L+ C S+++
Sbjct: 223 CFKEMR-------------------------------NQGMESNHFTFPSILTACTSISA 251
Query: 243 LDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISG 302
GRQVH ++ F +VYV S L+ MY KCG+L ++I D D+V WNS+I G
Sbjct: 252 YAFGRQVHGCIIWSGFGPNVYVQSALVDMYAKCGDLASARMILDTMEIDDVVCWNSMIVG 311
Query: 303 YAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEP 362
+G E++L +FH+M + + DD T VL + + +K G +
Sbjct: 312 CVTHGYMEEALVLFHKMHNRDIRIDDFTYPSVLKSLASCKNLKIGESVHSLTIKTGFDAC 371
Query: 363 KTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
KT A +VD+ + G + A+ + + + D I W SL+
Sbjct: 372 KTVSNA-LVDMYAKQGNLSCALDVFNKI-LDKDVISWTSLV 410
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 116/454 (25%), Positives = 201/454 (44%), Gaps = 56/454 (12%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDS-RIDDARRL 59
MP R+ +W M+ Y G + EA LF + P N ++W+ ++ G+ ++ ++ R+
Sbjct: 63 MPYRDKYTWNIMISAYANLGNLVEARKLFNETPIXNSITWSSLVSGYCKNGCEVEGLRQF 122
Query: 60 FDMMPEKDVVAQTNM--VLGYCQD-GRVDEGREIFDEMPK----KNVISWTTMISGYVNN 112
M + +Q + VL C + G+ I K N+ T ++ Y
Sbjct: 123 SQMWSDGQKPSQYTLGSVLRACSTLSLLHTGKMIHCYAIKIQLEANIFVATGLVDMYSKC 182
Query: 113 NRIDVARKLFEVMPE-KNEVSWTAMLMGYTQCGRIQDAWELFKAM----------PMKSV 161
+ A LF +P+ KN V WTAML GY Q G A + FK M S+
Sbjct: 183 KCLLEAEYLFFSLPDRKNYVQWTAMLTGYAQNGESLKAIQCFKEMRNQGMESNHFTFPSI 242
Query: 162 VASNSMI---------------LGLGQN--------------GEVQKARVVFDQMREKDD 192
+ + + I G G N G++ AR++ D M D
Sbjct: 243 LTACTSISAYAFGRQVHGCIIWSGFGPNVYVQSALVDMYAKCGDLASARMILDTMEIDDV 302
Query: 193 ATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQ 252
W+ MI GY E + LF M +R++ + SVL AS +L G VH+
Sbjct: 303 VCWNSMIVGCVTHGYMEEALVLFHKMHNRDIRIDDFTYPSVLKSLASCKNLKIGESVHSL 362
Query: 253 LVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKS 312
++ FD V++ L+ MY K G L +F+ KD++ W S+++GY G EK+
Sbjct: 363 TIKTGFDACKTVSNALVDMYAKQGNLSCALDVFNKILDKDVISWTSLVTGYVHNGFHEKA 422
Query: 313 LKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREI---FESMKSKYLVEPKTEHYAC 369
L++F +M ++ V D + V SAC+ ++ GR++ F + L+ +
Sbjct: 423 LQLFCDMRTARVDLDQFVVACVFSACAELTVIEFGRQVHANFIKSSAGSLLSAENS---- 478
Query: 370 MVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
++ + + G +EDA+++ ++M + I W +++
Sbjct: 479 LITMYAKCGCLEDAIRVXDSME-TRNVISWTAII 511
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 151/288 (52%), Gaps = 3/288 (1%)
Query: 136 MLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATW 195
+L ++ GR+ +A +LF MP + N MI G + +AR +F++ + TW
Sbjct: 43 LLSELSKNGRVDEARKLFDQMPYRDKYTWNIMISAYANLGNLVEARKLFNETPIXNSITW 102
Query: 196 SGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVR 255
S ++ Y + G E+E + F+ M +G + + +L SVL C++L+ L G+ +H ++
Sbjct: 103 SSLVSGYCKNGCEVEGLRQFSQMWSDGQKPSQYTLGSVLRACSTLSLLHTGKMIHCYAIK 162
Query: 256 CQFDVDVYVASVLITMYIKCGELVKGKLIFDNFAS-KDIVMWNSIISGYAQYGLGEKSLK 314
Q + +++VA+ L+ MY KC L++ + +F + K+ V W ++++GYAQ G K+++
Sbjct: 163 IQLEANIFVATGLVDMYSKCKCLLEAEYLFFSLPDRKNYVQWTAMLTGYAQNGESLKAIQ 222
Query: 315 VFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLL 374
F EM + G+ + T +L+AC+ GR++ + P + +VD+
Sbjct: 223 CFKEMRNQGMESNHFTFPSILTACTSISAYAFGRQVHGCIIWSGF-GPNVYVQSALVDMY 281
Query: 375 GRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKL 422
+ G + A +++ M + D + W S++ C TH ++ A V K+
Sbjct: 282 AKCGDLASARMILDTMEID-DVVCWNSMIVGCVTHGYMEEALVLFHKM 328
>gi|413947530|gb|AFW80179.1| hypothetical protein ZEAMMB73_142662 [Zea mays]
Length = 649
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 193/467 (41%), Positives = 289/467 (61%), Gaps = 1/467 (0%)
Query: 134 TAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDA 193
A++ Y +C ++ AW+LF M ++SVV+ S++ GL + G V +AR +F +M E+D
Sbjct: 184 NALVDMYAECADMESAWKLFDGMQVRSVVSWTSLLSGLTRLGRVDEARDLFGRMPERDTV 243
Query: 194 TWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQL 253
+W+ MI Y + E +++F MQ V + +++SV++ CA L +L+ G V +
Sbjct: 244 SWTAMIDGYVQAARFREALEMFREMQCSNVSADEFTMVSVITACAQLGALEMGEWVRVYM 303
Query: 254 VRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSL 313
R +D +V + LI MY KCG + + +F + +D W +II G A G GE+++
Sbjct: 304 SRQGIKMDAFVGNALIDMYSKCGSIERALDVFKDMHHRDKFTWTAIILGLAVNGYGEEAI 363
Query: 314 KVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDL 373
++FH M PD+VT +GVL+AC++ G V +GRE F SM+ Y + P HY C++DL
Sbjct: 364 EMFHRMIGVSETPDEVTFIGVLTACTHAGLVDKGREFFLSMRETYNIAPNVVHYGCIIDL 423
Query: 374 LGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPY 433
GRAG++ +A+ I+ MP P++ IWG+LL ACR H ++ E+ ++LLQ++P+N+ Y
Sbjct: 424 FGRAGKITEALDAIDQMPMTPNSTIWGTLLAACRVHGNSEIGELVTERLLQMDPENSTVY 483
Query: 434 ILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMI 493
LLSNIYA R+ DV LR + ++ + K PGCS IE+ +H F D SHP I
Sbjct: 484 TLLSNIYAKCNRWEDVRRLRHTIMEKGIKKEPGCSLIEMNGIIHEFVAGD-QSHPMSKEI 542
Query: 494 MRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRV 553
LE I L GY PD + V +V EEEK L +HSEKLA+A+ L+ IR+
Sbjct: 543 YCKLESIINDLNNVGYFPDVTEVFVEVAEEEKQKVLFWHSEKLAIAFALLSSEPNTVIRI 602
Query: 554 MKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
+KNLR+C DCH+AIKLIS++ GRE+++RD RFHHF+ G CSC+DYW
Sbjct: 603 VKNLRMCLDCHNAIKLISRLYGREVVVRDRTRFHHFRHGFCSCKDYW 649
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 139/312 (44%), Gaps = 45/312 (14%)
Query: 67 DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMP 126
D+ + +V Y + ++ ++FD M ++V+SWT+++SG R+D AR LF MP
Sbjct: 179 DLRVENALVDMYAECADMESAWKLFDGMQVRSVVSWTSLLSGLTRLGRVDEARDLFGRMP 238
Query: 127 EKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVA----------------------- 163
E++ VSWTAM+ GY Q R ++A E+F+ M +V A
Sbjct: 239 ERDTVSWTAMIDGYVQAARFREALEMFREMQCSNVSADEFTMVSVITACAQLGALEMGEW 298
Query: 164 ----------------SNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGY 207
N++I + G +++A VF M +D TW+ +I GY
Sbjct: 299 VRVYMSRQGIKMDAFVGNALIDMYSKCGSIERALDVFKDMHHRDKFTWTAIILGLAVNGY 358
Query: 208 ELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDV--DVYVA 265
E I++F M + + I VL+ C +D GR+ + R +++ +V
Sbjct: 359 GEEAIEMFHRMIGVSETPDEVTFIGVLTACTHAGLVDKGREFFLSM-RETYNIAPNVVHY 417
Query: 266 SVLITMYIKCGELVKGKLIFDNFA-SKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGV 324
+I ++ + G++ + D + + +W ++++ +G E V + +
Sbjct: 418 GCIIDLFGRAGKITEALDAIDQMPMTPNSTIWGTLLAACRVHGNSEIGELVTERLLQ--M 475
Query: 325 MPDDVTLVGVLS 336
P++ T+ +LS
Sbjct: 476 DPENSTVYTLLS 487
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 103/209 (49%), Gaps = 12/209 (5%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVV 69
A+V Y E + A LF M ++VVSWT +L G R R+D+AR LF MPE+D V
Sbjct: 184 NALVDMYAECADMESAWKLFDGMQVRSVVSWTSLLSGLTRLGRVDEARDLFGRMPERDTV 243
Query: 70 AQTNMVLGYCQDGRVDEGREIFDEMPKKNV----ISWTTMISGYVNNNRIDVARKLFEVM 125
+ T M+ GY Q R E E+F EM NV + ++I+ +++ + M
Sbjct: 244 SWTAMIDGYVQAARFREALEMFREMQCSNVSADEFTMVSVITACAQLGALEMGEWVRVYM 303
Query: 126 PEK----NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKAR 181
+ + A++ Y++CG I+ A ++FK M + ++ILGL NG ++A
Sbjct: 304 SRQGIKMDAFVGNALIDMYSKCGSIERALDVFKDMHHRDKFTWTAIILGLAVNGYGEEAI 363
Query: 182 VVFDQM----REKDDATWSGMIKVYERKG 206
+F +M D+ T+ G++ G
Sbjct: 364 EMFHRMIGVSETPDEVTFIGVLTACTHAG 392
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 135/292 (46%), Gaps = 21/292 (7%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
M R+VVSWT+++ G G + EA LF +MPE++ VSWT M+ G+++ +R +A +F
Sbjct: 206 MQVRSVVSWTSLLSGLTRLGRVDEARDLFGRMPERDTVSWTAMIDGYVQAARFREALEMF 265
Query: 61 DMMPEKDVVAQ----TNMVLGYCQDGRVDEGREIFDEMPKKNV----ISWTTMISGYVNN 112
M +V A +++ Q G ++ G + M ++ + +I Y
Sbjct: 266 REMQCSNVSADEFTMVSVITACAQLGALEMGEWVRVYMSRQGIKMDAFVGNALIDMYSKC 325
Query: 113 NRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGL- 171
I+ A +F+ M +++ +WTA+++G G ++A E+F M S +G+
Sbjct: 326 GSIERALDVFKDMHHRDKFTWTAIILGLAVNGYGEEAIEMFHRMIGVSETPDEVTFIGVL 385
Query: 172 ---GQNGEVQKARVVFDQMREKDDAT-----WSGMIKVYERKGYELEVIDLFTLMQKEGV 223
G V K R F MRE + + +I ++ R G E +D M +
Sbjct: 386 TACTHAGLVDKGREFFLSMRETYNIAPNVVHYGCIIDLFGRAGKITEALDAIDQMP---M 442
Query: 224 RVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKC 275
N ++L+ C + + G V +L++ + + V ++L +Y KC
Sbjct: 443 TPNSTIWGTLLAACRVHGNSEIGELVTERLLQMDPE-NSTVYTLLSNIYAKC 493
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 79/347 (22%), Positives = 142/347 (40%), Gaps = 65/347 (18%)
Query: 118 ARKLFEVMPEKNEVSWTA-MLMGYTQC---GRIQDAWE---LFKAMPMKSVVA------S 164
AR+L E +P + V+ + GY + G + DA+ L KA+ S A +
Sbjct: 8 ARRLLEGIPRRCLVAAREDAVAGYARMLARGAMPDAYTFPPLLKAVARGSSAAPVRAVHA 67
Query: 165 NSMILGLGQNGEVQKARVVFDQM-------------REKDD-ATWSGMIKVYERKGYELE 210
+ + G+G+N V + V RE+D W+ +I + R E
Sbjct: 68 HVVKFGMGRNAHVATSLVTAYAAGGDGAAARALLSERERDTPVVWNALISGHNRCRRFGE 127
Query: 211 VIDLFTLMQKEGVRVNFPSLISVLSVCA-SLASLDHGRQVHAQLVRCQFDVDVYVASVLI 269
F M + G + +SVLS C + G QVH ++V D+ V + L+
Sbjct: 128 ACCSFVDMARAGAAPTPVTYVSVLSACGKGTGDVLLGMQVHGRVVGSGVLPDLRVENALV 187
Query: 270 TMYIKCGELVKGKLIFDNFASKDIVMWNSIIS---------------------------- 301
MY +C ++ +FD + +V W S++S
Sbjct: 188 DMYAECADMESAWKLFDGMQVRSVVSWTSLLSGLTRLGRVDEARDLFGRMPERDTVSWTA 247
Query: 302 ---GYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKY 358
GY Q ++L++F EM S V D+ T+V V++AC+ G ++ G + M +
Sbjct: 248 MIDGYVQAARFREALEMFREMQCSNVSADEFTMVSVITACAQLGALEMGEWVRVYMSRQG 307
Query: 359 LVEPKTEHYA--CMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
+ K + + ++D+ + G +E A+ + + M D W +++
Sbjct: 308 I---KMDAFVGNALIDMYSKCGSIERALDVFKDM-HHRDKFTWTAII 350
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 109/239 (45%), Gaps = 13/239 (5%)
Query: 226 NFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIF 285
FP L+ ++ +S A + R VHA +V+ + +VA+ L+T Y G+ + +
Sbjct: 45 TFPPLLKAVARGSSAAPV---RAVHAHVVKFGMGRNAHVATSLVTAYAAGGDGAAARALL 101
Query: 286 DNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSY-TGKV 344
V+WN++ISG+ + ++ F +M +G P VT V VLSAC TG V
Sbjct: 102 SERERDTPVVWNALISGHNRCRRFGEACCSFVDMARAGAAPTPVTYVSVLSACGKGTGDV 161
Query: 345 KEGREIF-ESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
G ++ + S L + + E+ +VD+ +E A KL + M + W SLL
Sbjct: 162 LLGMQVHGRVVGSGVLPDLRVEN--ALVDMYAECADMESAWKLFDGMQVR-SVVSWTSLL 218
Query: 404 GACRTHMKLDLAEVAAKKLLQLEP-KNAGPYILLSNIYASQGRFHDVAELRKNMRKRNV 461
++D A+ L P ++ + + + Y RF + E+ + M+ NV
Sbjct: 219 SGLTRLGRVD----EARDLFGRMPERDTVSWTAMIDGYVQAARFREALEMFREMQCSNV 273
>gi|218188961|gb|EEC71388.1| hypothetical protein OsI_03510 [Oryza sativa Indica Group]
Length = 706
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 197/441 (44%), Positives = 267/441 (60%), Gaps = 3/441 (0%)
Query: 161 VVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQK 220
VV +M+ L GE AR +FD M ++D W+ MI Y G E + LF M+
Sbjct: 268 VVCVTAMVGALATGGEADAARELFDGMPQRDHVAWNAMIAGYVHTGRSREALRLFDEMRH 327
Query: 221 EGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVK 280
G V +L+S L+ CA L +L+ G+ VH+ + V + + LI MY KCG +
Sbjct: 328 AGAAVGEVTLVSALTACAQLGALERGKWVHSCAHSRGMRLSVTLGTALIDMYSKCGAVAA 387
Query: 281 GKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSY 340
+FD+ +++ W S +SG A G+G L +F M S+GV P+ VT V VL CS
Sbjct: 388 AMEVFDSMGERNVYTWTSAVSGLAMNGMGRDCLALFKRMESTGVEPNGVTFVVVLRGCSM 447
Query: 341 TGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWG 400
G V EGR F+SMKS + ++P EHY CMVDL GRAG+++DA+ I MP EP +WG
Sbjct: 448 AGLVDEGRACFDSMKSNHGIDPWLEHYGCMVDLYGRAGRLDDAVNFINGMPLEPHEGVWG 507
Query: 401 SLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRN 460
+LL A R H ++L + A KL+ +E KN ++LLSNIYA + V+ +R M+ +
Sbjct: 508 ALLNASRIHKNVELGKYAMDKLMAIESKNDAAHVLLSNIYADSQNWKGVSNVRNMMKAKG 567
Query: 461 VIKPPGCSWIEVEKKVH-MFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHD 519
V K PGCS IEV KVH F G +HP H I ML ++ LR GY ++ VL D
Sbjct: 568 VKKVPGCSAIEVGGKVHEFFVGGK--THPRHKEIEMMLAEMNQRLRLQGYIANTKEVLFD 625
Query: 520 VDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREII 579
++EE+K ++ HSEKLA+A+GLV LPE + IR++KNLRVC DCH K+ISKV REI+
Sbjct: 626 IEEEDKEDAISLHSEKLAIAFGLVALPEDMEIRIVKNLRVCEDCHDYTKMISKVFNREIV 685
Query: 580 LRDANRFHHFKDGLCSCRDYW 600
+RD NRFHHFKDG CSC+DYW
Sbjct: 686 MRDRNRFHHFKDGACSCKDYW 706
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 99/222 (44%), Gaps = 11/222 (4%)
Query: 67 DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMP 126
DVV T MV G D RE+FD MP+++ ++W MI+GYV+ R A +LF+ M
Sbjct: 267 DVVCVTAMVGALATGGEADAARELFDGMPQRDHVAWNAMIAGYVHTGRSREALRLFDEMR 326
Query: 127 EK----NEVSWTAMLMGYTQCGRIQDAWELFKAMPMK----SVVASNSMILGLGQNGEVQ 178
EV+ + L Q G ++ + + SV ++I + G V
Sbjct: 327 HAGAAVGEVTLVSALTACAQLGALERGKWVHSCAHSRGMRLSVTLGTALIDMYSKCGAVA 386
Query: 179 KARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCA 238
A VFD M E++ TW+ + G + + LF M+ GV N + + VL C+
Sbjct: 387 AAMEVFDSMGERNVYTWTSAVSGLAMNGMGRDCLALFKRMESTGVEPNGVTFVVVLRGCS 446
Query: 239 SLASLDHGRQVHAQLVRCQFDVDVYVA--SVLITMYIKCGEL 278
+D GR + + +D ++ ++ +Y + G L
Sbjct: 447 MAGLVDEGRACFDSM-KSNHGIDPWLEHYGCMVDLYGRAGRL 487
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 100/234 (42%), Gaps = 17/234 (7%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMP 64
+VV TAMV G A LF MP+++ V+W M+ G++ R +A RLFD M
Sbjct: 267 DVVCVTAMVGALATGGEADAARELFDGMPQRDHVAWNAMIAGYVHTGRSREALRLFDEMR 326
Query: 65 EKD-VVAQTNMV--LGYC-QDGRVDEGREIFDEMPKK----NVISWTTMISGYVNNNRID 116
V + +V L C Q G ++ G+ + + +V T +I Y +
Sbjct: 327 HAGAAVGEVTLVSALTACAQLGALERGKWVHSCAHSRGMRLSVTLGTALIDMYSKCGAVA 386
Query: 117 VARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSV----VASNSMILGLG 172
A ++F+ M E+N +WT+ + G G +D LFK M V V ++ G
Sbjct: 387 AAMEVFDSMGERNVYTWTSAVSGLAMNGMGRDCLALFKRMESTGVEPNGVTFVVVLRGCS 446
Query: 173 QNGEVQKARVVFDQMREKDD-----ATWSGMIKVYERKGYELEVIDLFTLMQKE 221
G V + R FD M+ + M+ +Y R G + ++ M E
Sbjct: 447 MAGLVDEGRACFDSMKSNHGIDPWLEHYGCMVDLYGRAGRLDDAVNFINGMPLE 500
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 73/170 (42%), Gaps = 16/170 (9%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEK----------NVVSWTVMLGGFIRD 50
MP+R+ V+W AM+ GYV G EA LF +M + ++ LG R
Sbjct: 294 MPQRDHVAWNAMIAGYVHTGRSREALRLFDEMRHAGAAVGEVTLVSALTACAQLGALERG 353
Query: 51 SRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYV 110
+ M V T ++ Y + G V E+FD M ++NV +WT+ +SG
Sbjct: 354 KWVHSCAHSRGM--RLSVTLGTALIDMYSKCGAVAAAMEVFDSMGERNVYTWTSAVSGLA 411
Query: 111 NNNRIDVARKLFEVMP----EKNEVSWTAMLMGYTQCGRIQDAWELFKAM 156
N LF+ M E N V++ +L G + G + + F +M
Sbjct: 412 MNGMGRDCLALFKRMESTGVEPNGVTFVVVLRGCSMAGLVDEGRACFDSM 461
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 81/185 (43%), Gaps = 33/185 (17%)
Query: 248 QVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDI-------------- 293
VHA +R D +V S ++MY G++ + F AS D+
Sbjct: 223 SVHASALRHGHAGDPHVQSGAVSMYAAAGDVGAARAAFAEIASPDVVCVTAMVGALATGG 282
Query: 294 -----------------VMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLS 336
V WN++I+GY G ++L++F EM +G +VTLV L+
Sbjct: 283 EADAARELFDGMPQRDHVAWNAMIAGYVHTGRSREALRLFDEMRHAGAAVGEVTLVSALT 342
Query: 337 ACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDA 396
AC+ G ++ G+ + S+ + T A ++D+ + G V AM++ ++M E +
Sbjct: 343 ACAQLGALERGKWVHSCAHSRGMRLSVTLGTA-LIDMYSKCGAVAAAMEVFDSMG-ERNV 400
Query: 397 IIWGS 401
W S
Sbjct: 401 YTWTS 405
>gi|147781801|emb|CAN65443.1| hypothetical protein VITISV_011420 [Vitis vinifera]
Length = 485
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 188/477 (39%), Positives = 301/477 (63%), Gaps = 6/477 (1%)
Query: 129 NEVSWTAMLMGYTQCGRIQDAWELF---KAMPMKSVVASNSMILGL-GQNGEVQKARVVF 184
+EV+ +++ Q G ++ L K + + ++ N+ IL + + +++ A+ VF
Sbjct: 10 DEVTMVSLVPACAQLGNLERGKLLHSYSKELGLDENLSVNNAILDMYCKCDDIESAQEVF 69
Query: 185 DQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLD 244
+++REKD +W+ M+ + GY E + LF MQ + + +L+ VLS CA +LD
Sbjct: 70 NRIREKDVLSWTSMLSGLAKSGYFQESLALFRKMQLHKIEPDEITLVGVLSACAQTGALD 129
Query: 245 HGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYA 304
G+ +H + + + + D+ + + L+ MY KCG + +F +++ WN++I G A
Sbjct: 130 QGKYIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFTWNAMIGGLA 189
Query: 305 QYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKT 364
+G GE ++ +F +M +MPDDVT + +L ACS+ G V EG +F++MK+K+ +EP+
Sbjct: 190 MHGHGEDAISLFDQMEXDKLMPDDVTFIALLCACSHAGLVDEGLAMFQAMKNKFQIEPRM 249
Query: 365 EHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQ 424
EHY C+VDLL RA +V+DA+ IE MP + ++++W +LLGACR+ DLAE +++++
Sbjct: 250 EHYGCVVDLLCRARKVDDALAFIENMPIKANSVLWATLLGACRSGGHFDLAEKIXRRVIE 309
Query: 425 LEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDC 484
LEP + G Y++LSN+YA ++ +LRK M+ + + K PGCSWIE+ +H F D
Sbjct: 310 LEPDSCGRYVMLSNLYAGVSQWDHALKLRKQMKNKGIEKTPGCSWIELNGMIHQFVAGD- 368
Query: 485 VSHPEHPMIMRMLEKIGGLLR-EAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLV 543
SH + I M+E++ + + G+ P ++ VL D++EEEK HSL HSEKLA+A GL+
Sbjct: 369 RSHLQTEQIYAMIEEMTRRVNLDGGHVPGTANVLFDIEEEEKEHSLFLHSEKLAIALGLI 428
Query: 544 KLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
P G PIR++KNLRVC DCHS +K+ SKV REI+ RD +RFHHFK+G CSC D+W
Sbjct: 429 STPSGSPIRIVKNLRVCNDCHSFLKVTSKVYNREIVARDRSRFHHFKEGSCSCMDFW 485
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 89/200 (44%), Gaps = 12/200 (6%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDM 62
+ N+ A++ Y + I A +F ++ EK+V+SWT ML G + ++ LF
Sbjct: 43 DENLSVNNAILDMYCKCDDIESAQEVFNRIREKDVLSWTSMLSGLAKSGYFQESLALFRK 102
Query: 63 MP----EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPK----KNVISWTTMISGYVNNNR 114
M E D + ++ Q G +D+G+ I + K +++ T ++ Y
Sbjct: 103 MQLHKIEPDEITLVGVLSACAQTGALDQGKYIHLLIDKFEINCDLVLETALVDMYAKCGS 162
Query: 115 IDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGL--- 171
ID+A ++F M +N +W AM+ G G +DA LF M ++ + + L
Sbjct: 163 IDLALQVFRRMRVRNVFTWNAMIGGLAMHGHGEDAISLFDQMEXDKLMPDDVTFIALLCA 222
Query: 172 -GQNGEVQKARVVFDQMREK 190
G V + +F M+ K
Sbjct: 223 CSHAGLVDEGLAMFQAMKNK 242
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 66/150 (44%), Gaps = 11/150 (7%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMP 64
++V TA+V Y + G I A +F +M +NV +W M+GG +DA LFD M
Sbjct: 146 DLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFTWNAMIGGLAMHGHGEDAISLFDQME 205
Query: 65 EK----DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVIS-----WTTMISGYVNNNRI 115
D V ++ G VDEG +F M K I + ++ ++
Sbjct: 206 XDKLMPDDVTFIALLCACSHAGLVDEGLAMFQAMKNKFQIEPRMEHYGCVVDLLCRARKV 265
Query: 116 DVARKLFEVMPEK-NEVSWTAMLMGYTQCG 144
D A E MP K N V W A L+G + G
Sbjct: 266 DDALAFIENMPIKANSVLW-ATLLGACRSG 294
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/223 (20%), Positives = 91/223 (40%), Gaps = 43/223 (19%)
Query: 67 DVVAQTNMVLGYCQDGRVDEGREIFDEMPK----KNVISWTTMISGYVNNNRIDVARKLF 122
D V ++V Q G ++ G+ + + +N+ ++ Y + I+ A+++F
Sbjct: 10 DEVTMVSLVPACAQLGNLERGKLLHSYSKELGLDENLSVNNAILDMYCKCDDIESAQEVF 69
Query: 123 EVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGL----------- 171
+ EK+ +SWT+ML G + G Q++ LF+ M + + ++G+
Sbjct: 70 NRIREKDVLSWTSMLSGLAKSGYFQESLALFRKMQLHKIEPDEITLVGVLSACAQTGALD 129
Query: 172 ----------------------------GQNGEVQKARVVFDQMREKDDATWSGMIKVYE 203
+ G + A VF +MR ++ TW+ MI
Sbjct: 130 QGKYIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFTWNAMIGGLA 189
Query: 204 RKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHG 246
G+ + I LF M+ + + + + I++L C+ +D G
Sbjct: 190 MHGHGEDAISLFDQMEXDKLMPDDVTFIALLCACSHAGLVDEG 232
Score = 45.4 bits (106), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 60/141 (42%), Gaps = 14/141 (9%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV----VSWTVMLGGFIRDSRIDDA 56
M RNV +W AM+ G G +A +LF QM + V++ +L +D+
Sbjct: 173 MRVRNVFTWNAMIGGLAMHGHGEDAISLFDQMEXDKLMPDDVTFIALLCACSHAGLVDEG 232
Query: 57 RRLFDMMPEKDVVAQTNMVLG-----YCQDGRVDEGREIFDEMP-KKNVISWTTMISGYV 110
+F M K + G C+ +VD+ + MP K N + W T++
Sbjct: 233 LAMFQAMKNKFQIEPRMEHYGCVVDLLCRARKVDDALAFIENMPIKANSVLWATLLGACR 292
Query: 111 NNNRIDVA----RKLFEVMPE 127
+ D+A R++ E+ P+
Sbjct: 293 SGGHFDLAEKIXRRVIELEPD 313
>gi|356529748|ref|XP_003533450.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Glycine max]
Length = 604
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 204/528 (38%), Positives = 316/528 (59%), Gaps = 10/528 (1%)
Query: 82 GRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEK----NEVSWTAML 137
G ++ IF ++ + + TMI G VN+ ++ A L+ M E+ + ++ +L
Sbjct: 78 GSMEYACSIFRQIEEPGSFEYNTMIRGNVNSMNLEEALLLYVEMLERGIEPDNFTYPFVL 137
Query: 138 MGYTQCGRIQDAWEL----FKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDA 193
+ G +++ ++ FKA V N +I G+ G ++ A VVF+QM EK A
Sbjct: 138 KACSLLGALKEGVQIHAHVFKAGLEGDVFVQNGLINMYGKCGAIEHASVVFEQMDEKSVA 197
Query: 194 TWSGMIKVYERKGYELEVIDLFTLMQKEGV-RVNFPSLISVLSVCASLASLDHGRQVHAQ 252
+WS +I + E + L M EG R L+S LS C L S + GR +H
Sbjct: 198 SWSSIIGAHASVEMWHECLMLLGDMSGEGRHRAEESILVSALSACTHLGSPNFGRCIHGI 257
Query: 253 LVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKS 312
L+R +++V V + LI MY+K G L KG +F N A K+ + II+G A +G G ++
Sbjct: 258 LLRNISELNVAVKTSLIDMYVKSGSLEKGLCVFQNMAQKNRYSYTVIITGLAIHGRGREA 317
Query: 313 LKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVD 372
L VF +M G+ PDDV VGVLSACS+ G V EG + F ++ ++ ++P +HY CMVD
Sbjct: 318 LSVFSDMLEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFNRLQFEHKIKPTIQHYGCMVD 377
Query: 373 LLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGP 432
L+GRAG ++ A LI++MP +P+ ++W SLL AC+ H L++ E+AA+ + +L N G
Sbjct: 378 LMGRAGMLKGAYDLIKSMPIKPNDVVWRSLLSACKVHHNLEIGEIAAENIFKLNQHNPGD 437
Query: 433 YILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPM 492
Y++L+N+YA ++ DVA +R M ++++++ PG S +E + V+ F +D S P+
Sbjct: 438 YLVLANMYARAKKWADVARIRTEMAEKHLVQTPGFSLVEANRNVYKFVSQD-KSQPQCET 496
Query: 493 IMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIR 552
I M++++ L+ GY PD S VL DVDE+EK L++HS+KLA+A+ L++ EG IR
Sbjct: 497 IYDMIQQMEWQLKFEGYTPDMSQVLLDVDEDEKRQRLKHHSQKLAIAFALIQTSEGSRIR 556
Query: 553 VMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
+ +N+R+C DCH+ K IS + REI +RD NRFHHFKDG CSC+DYW
Sbjct: 557 ISRNIRMCNDCHTYTKFISVIYEREITVRDRNRFHHFKDGTCSCKDYW 604
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 80/174 (45%), Gaps = 4/174 (2%)
Query: 234 LSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITM--YIKCGELVKGKLIFDNFASK 291
LS+ S++ +QVHA +++ D + S L+ + G + IF
Sbjct: 34 LSLLKRCKSMEEFKQVHAHILKLGLFYDSFCGSNLVATCALSRWGSMEYACSIFRQIEEP 93
Query: 292 DIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIF 351
+N++I G E++L ++ EM G+ PD+ T VL ACS G +KEG +I
Sbjct: 94 GSFEYNTMIRGNVNSMNLEEALLLYVEMLERGIEPDNFTYPFVLKACSLLGALKEGVQIH 153
Query: 352 ESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
+ K +E ++++ G+ G +E A + E M E W S++GA
Sbjct: 154 AHV-FKAGLEGDVFVQNGLINMYGKCGAIEHASVVFEQMD-EKSVASWSSIIGA 205
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/264 (20%), Positives = 111/264 (42%), Gaps = 21/264 (7%)
Query: 9 WTAMVRGYVEEGMITEAGTLFWQMPEKN----------VVSWTVMLGGFIRDSRIDDARR 58
+ M+RG V + EA L+ +M E+ V+ +LG +I
Sbjct: 98 YNTMIRGNVNSMNLEEALLLYVEMLERGIEPDNFTYPFVLKACSLLGALKEGVQIH--AH 155
Query: 59 LFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVA 118
+F E DV Q ++ Y + G ++ +F++M +K+V SW+++I + +
Sbjct: 156 VFKAGLEGDVFVQNGLINMYGKCGAIEHASVVFEQMDEKSVASWSSIIGAHASVEMWHEC 215
Query: 119 RKLFEVMP--EKNEVSWTAMLMGYTQCGRIQDA-------WELFKAMPMKSVVASNSMIL 169
L M ++ + ++ + C + L + + +V S+I
Sbjct: 216 LMLLGDMSGEGRHRAEESILVSALSACTHLGSPNFGRCIHGILLRNISELNVAVKTSLID 275
Query: 170 GLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPS 229
++G ++K VF M +K+ +++ +I G E + +F+ M +EG+ +
Sbjct: 276 MYVKSGSLEKGLCVFQNMAQKNRYSYTVIITGLAIHGRGREALSVFSDMLEEGLAPDDVV 335
Query: 230 LISVLSVCASLASLDHGRQVHAQL 253
+ VLS C+ ++ G Q +L
Sbjct: 336 YVGVLSACSHAGLVNEGLQCFNRL 359
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 108/257 (42%), Gaps = 20/257 (7%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF-D 61
E +V ++ Y + G I A +F QM EK+V SW+ ++G + L D
Sbjct: 162 EGDVFVQNGLINMYGKCGAIEHASVVFEQMDEKSVASWSSIIGAHASVEMWHECLMLLGD 221
Query: 62 MMPEKDVVAQTNMV---------LGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
M E A+ +++ LG GR G + + + NV T++I YV +
Sbjct: 222 MSGEGRHRAEESILVSALSACTHLGSPNFGRCIHGI-LLRNISELNVAVKTSLIDMYVKS 280
Query: 113 NRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGL- 171
++ +F+ M +KN S+T ++ G GR ++A +F M + + + + +G+
Sbjct: 281 GSLEKGLCVFQNMAQKNRYSYTVIITGLAIHGRGREALSVFSDMLEEGLAPDDVVYVGVL 340
Query: 172 ---GQNGEVQKARVVFD--QMREKDDAT---WSGMIKVYERKGYELEVIDLFTLMQKEGV 223
G V + F+ Q K T + M+ + R G DL M +
Sbjct: 341 SACSHAGLVNEGLQCFNRLQFEHKIKPTIQHYGCMVDLMGRAGMLKGAYDLIKSMPIKPN 400
Query: 224 RVNFPSLISVLSVCASL 240
V + SL+S V +L
Sbjct: 401 DVVWRSLLSACKVHHNL 417
>gi|15240583|ref|NP_196827.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181132|sp|Q9LYV3.1|PP377_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial; Flags: Precursor
gi|7529278|emb|CAB86630.1| putative protein [Arabidopsis thaliana]
gi|332004486|gb|AED91869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 822
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 220/647 (34%), Positives = 353/647 (54%), Gaps = 51/647 (7%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFD- 61
+ N A++ Y G + A T+F + K++V W ++ ++ + +D+ +L
Sbjct: 178 DSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSC 237
Query: 62 -----MMPEK---DVVAQTNMVLG------------------------------YCQDGR 83
MP D + ++ LG Y Q G
Sbjct: 238 MRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGD 297
Query: 84 VDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEK----NEVSWTAMLMG 139
+ + ++F+EMPK +V+ W+ MI+ + N + A LF M E NE + +++L G
Sbjct: 298 MSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNG 357
Query: 140 YTQCGRIQDAWELFKAMPMK-----SVVASNSMILGLGQNGEVQKARVVFDQMREKDDAT 194
G+ E + +K + SN++I + ++ A +F ++ K++ +
Sbjct: 358 -CAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVS 416
Query: 195 WSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLV 254
W+ +I YE G + +F + V V + S L CASLAS+D G QVH +
Sbjct: 417 WNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAI 476
Query: 255 RCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLK 314
+ V V++ LI MY KCG++ + +F+ + D+ WN++ISGY+ +GLG ++L+
Sbjct: 477 KTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALR 536
Query: 315 VFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLL 374
+ M P+ +T +GVLS CS G + +G+E FESM + +EP EHY CMV LL
Sbjct: 537 ILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLL 596
Query: 375 GRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYI 434
GR+GQ++ AMKLIE +P+EP +IW ++L A + A +A+++L++ PK+ Y+
Sbjct: 597 GRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEILKINPKDEATYV 656
Query: 435 LLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIM 494
L+SN+YA ++ +VA +RK+M++ V K PG SWIE + VH F+ HP+ +I
Sbjct: 657 LVSNMYAGAKQWANVASIRKSMKEMGVKKEPGLSWIEHQGDVHYFS-VGLSDHPDMKLIN 715
Query: 495 RMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVP-IRV 553
MLE + AGY PD + VL D+D+EEK L HSE+LA+AYGLV++P I +
Sbjct: 716 GMLEWLNMKATRAGYVPDRNAVLLDMDDEEKDKRLWVHSERLALAYGLVRMPSSRNRILI 775
Query: 554 MKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
MKNLR+C DCHSA+K+IS ++ R++++RD NRFHHF G+CSC D+W
Sbjct: 776 MKNLRICSDCHSAMKVISSIVQRDLVIRDMNRFHHFHAGVCSCGDHW 822
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 109/421 (25%), Positives = 186/421 (44%), Gaps = 14/421 (3%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MPERN VS+ + +GY + I L + E N +T L F+ + + L
Sbjct: 110 MPERNNVSFVTLAQGYACQDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICPWLH 169
Query: 61 D----MMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRID 116
+ + + ++ Y G VD R +F+ + K+++ W ++S YV N +
Sbjct: 170 SPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFE 229
Query: 117 VARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGL- 171
+ KL M N ++ L G A + + V + +GL
Sbjct: 230 DSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLL 289
Query: 172 ---GQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFP 228
Q G++ A VF++M + D WS MI + + G+ E +DLF M++ V N
Sbjct: 290 QLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEF 349
Query: 229 SLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNF 288
+L S+L+ CA G Q+H +V+ FD+D+YV++ LI +Y KC ++ +F
Sbjct: 350 TLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAEL 409
Query: 289 ASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGR 348
+SK+ V WN++I GY G G K+ +F E + V +VT L AC+ + G
Sbjct: 410 SSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGV 469
Query: 349 EIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRT 408
++ + K K ++D+ + G ++ A + M D W +L+ T
Sbjct: 470 QV-HGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEME-TIDVASWNALISGYST 527
Query: 409 H 409
H
Sbjct: 528 H 528
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 75/341 (21%), Positives = 155/341 (45%), Gaps = 6/341 (1%)
Query: 67 DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMP 126
D+ A ++ Y + G + +FDEMP++N +S+ T+ GY + I + +L
Sbjct: 83 DLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYACQDPIGLYSRLHREGH 142
Query: 127 EKNEVSWTAMLMGYTQCGRIQDA-W---ELFKAMPMKSVVASNSMILGLGQNGEVQKARV 182
E N +T+ L + + + W + K + ++I G V AR
Sbjct: 143 ELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSART 202
Query: 183 VFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLAS 242
VF+ + KD W+G++ Y GY + + L + M+ G N + + L L +
Sbjct: 203 VFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGA 262
Query: 243 LDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISG 302
D + VH Q+++ + +D V L+ +Y + G++ +F+ D+V W+ +I+
Sbjct: 263 FDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIAR 322
Query: 303 YAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEP 362
+ Q G +++ +F M + V+P++ TL +L+ C+ GK E + K +
Sbjct: 323 FCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCA-IGKCSGLGEQLHGLVVKVGFDL 381
Query: 363 KTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
++D+ + +++ A+KL + + + W +++
Sbjct: 382 DIYVSNALIDVYAKCEKMDTAVKLFAELS-SKNEVSWNTVI 421
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 122/274 (44%), Gaps = 22/274 (8%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MP+ +VV W+ M+ + + G EA LF +M E VV L + I L
Sbjct: 308 MPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLG 367
Query: 61 DMMP--------EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+ + + D+ ++ Y + ++D ++F E+ KN +SW T+I GY N
Sbjct: 368 EQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYEN- 426
Query: 113 NRIDVARKLFEVMPE--KNEVSWTAMLMGYT--QCGR-------IQDAWELFKAMPMKSV 161
+ K F + E +N+VS T + C +Q K K V
Sbjct: 427 --LGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKV 484
Query: 162 VASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKE 221
SNS+I + G+++ A+ VF++M D A+W+ +I Y G + + + +M+
Sbjct: 485 AVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDR 544
Query: 222 GVRVNFPSLISVLSVCASLASLDHGRQVHAQLVR 255
+ N + + VLS C++ +D G++ ++R
Sbjct: 545 DCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIR 578
Score = 43.5 bits (101), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 55/255 (21%), Positives = 104/255 (40%), Gaps = 46/255 (18%)
Query: 246 GRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYA- 304
+ +H +++ +D++ ++L+ Y+K G +FD ++ V + ++ GYA
Sbjct: 68 AKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYAC 127
Query: 305 QYGLGEKS-----------------LKVFHEMFSSGVMP-----------DDVTLVG--V 334
Q +G S LK+F + + + P D VG +
Sbjct: 128 QDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAAL 187
Query: 335 LSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAM---P 391
++A S G V R +FE + K +V +A +V G ED++KL+ M
Sbjct: 188 INAYSVCGSVDSARTVFEGILCKDIVV-----WAGIVSCYVENGYFEDSLKLLSCMRMAG 242
Query: 392 FEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQ----LEPKNAGPYILLSNIYASQGRFH 447
F P+ + + L A D A+ ++L+ L+P+ + L +Y G
Sbjct: 243 FMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVG---VGLLQLYTQLGDMS 299
Query: 448 DVAELRKNMRKRNVI 462
D ++ M K +V+
Sbjct: 300 DAFKVFNEMPKNDVV 314
>gi|222619165|gb|EEE55297.1| hypothetical protein OsJ_03249 [Oryza sativa Japonica Group]
Length = 706
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 197/441 (44%), Positives = 267/441 (60%), Gaps = 3/441 (0%)
Query: 161 VVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQK 220
VV +M+ L GE AR +FD M ++D W+ MI Y G E + LF M+
Sbjct: 268 VVCVTAMVGALATGGEADAARELFDGMPQRDHVAWNAMIAGYVHTGRSREALRLFDEMRH 327
Query: 221 EGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVK 280
G V +L+S L+ CA L +L+ G+ VH+ + V + + LI MY KCG +
Sbjct: 328 AGAAVGEVTLVSALTACAQLGALERGKWVHSCAHSRGMRLSVTLGTALIDMYSKCGAVAA 387
Query: 281 GKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSY 340
+FD+ +++ W S +SG A G+G L +F M S+GV P+ VT V VL CS
Sbjct: 388 AMEVFDSMGERNVYTWTSAVSGLAMNGMGRDCLALFKRMESTGVEPNGVTFVVVLRGCSM 447
Query: 341 TGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWG 400
G V EGR F+SMKS + ++P EHY CMVDL GRAG+++DA+ I MP EP +WG
Sbjct: 448 AGLVDEGRACFDSMKSNHGIDPWLEHYGCMVDLYGRAGRLDDAVNFINGMPLEPHEGVWG 507
Query: 401 SLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRN 460
+LL A R H ++L + A KL+ +E KN ++LLSNIYA + V+ +R M+ +
Sbjct: 508 ALLNASRIHKNVELGKYAMDKLMAIESKNDAAHVLLSNIYADSQNWKGVSNVRNMMKAKG 567
Query: 461 VIKPPGCSWIEVEKKVH-MFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHD 519
V K PGCS IEV KVH F G +HP H I ML ++ LR GY ++ VL D
Sbjct: 568 VKKVPGCSAIEVGGKVHEFFVGGK--THPRHKEIEMMLAEMNQRLRLQGYIANTKEVLFD 625
Query: 520 VDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREII 579
++EE+K ++ HSEKLA+A+GLV LPE + IR++KNLRVC DCH K+ISKV REI+
Sbjct: 626 IEEEDKEDAISLHSEKLAIAFGLVALPEDMEIRIVKNLRVCEDCHDYTKMISKVFNREIV 685
Query: 580 LRDANRFHHFKDGLCSCRDYW 600
+RD NRFHHFKDG CSC+DYW
Sbjct: 686 MRDRNRFHHFKDGACSCKDYW 706
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 99/222 (44%), Gaps = 11/222 (4%)
Query: 67 DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMP 126
DVV T MV G D RE+FD MP+++ ++W MI+GYV+ R A +LF+ M
Sbjct: 267 DVVCVTAMVGALATGGEADAARELFDGMPQRDHVAWNAMIAGYVHTGRSREALRLFDEMR 326
Query: 127 EK----NEVSWTAMLMGYTQCGRIQDAWELFKAMPMK----SVVASNSMILGLGQNGEVQ 178
EV+ + L Q G ++ + + SV ++I + G V
Sbjct: 327 HAGAAVGEVTLVSALTACAQLGALERGKWVHSCAHSRGMRLSVTLGTALIDMYSKCGAVA 386
Query: 179 KARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCA 238
A VFD M E++ TW+ + G + + LF M+ GV N + + VL C+
Sbjct: 387 AAMEVFDSMGERNVYTWTSAVSGLAMNGMGRDCLALFKRMESTGVEPNGVTFVVVLRGCS 446
Query: 239 SLASLDHGRQVHAQLVRCQFDVDVYVA--SVLITMYIKCGEL 278
+D GR + + +D ++ ++ +Y + G L
Sbjct: 447 MAGLVDEGRACFDSM-KSNHGIDPWLEHYGCMVDLYGRAGRL 487
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 100/234 (42%), Gaps = 17/234 (7%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMP 64
+VV TAMV G A LF MP+++ V+W M+ G++ R +A RLFD M
Sbjct: 267 DVVCVTAMVGALATGGEADAARELFDGMPQRDHVAWNAMIAGYVHTGRSREALRLFDEMR 326
Query: 65 EKD-VVAQTNMV--LGYC-QDGRVDEGREIFDEMPKK----NVISWTTMISGYVNNNRID 116
V + +V L C Q G ++ G+ + + +V T +I Y +
Sbjct: 327 HAGAAVGEVTLVSALTACAQLGALERGKWVHSCAHSRGMRLSVTLGTALIDMYSKCGAVA 386
Query: 117 VARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSV----VASNSMILGLG 172
A ++F+ M E+N +WT+ + G G +D LFK M V V ++ G
Sbjct: 387 AAMEVFDSMGERNVYTWTSAVSGLAMNGMGRDCLALFKRMESTGVEPNGVTFVVVLRGCS 446
Query: 173 QNGEVQKARVVFDQMREKDD-----ATWSGMIKVYERKGYELEVIDLFTLMQKE 221
G V + R FD M+ + M+ +Y R G + ++ M E
Sbjct: 447 MAGLVDEGRACFDSMKSNHGIDPWLEHYGCMVDLYGRAGRLDDAVNFINGMPLE 500
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 73/170 (42%), Gaps = 16/170 (9%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEK----------NVVSWTVMLGGFIRD 50
MP+R+ V+W AM+ GYV G EA LF +M + ++ LG R
Sbjct: 294 MPQRDHVAWNAMIAGYVHTGRSREALRLFDEMRHAGAAVGEVTLVSALTACAQLGALERG 353
Query: 51 SRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYV 110
+ M V T ++ Y + G V E+FD M ++NV +WT+ +SG
Sbjct: 354 KWVHSCAHSRGM--RLSVTLGTALIDMYSKCGAVAAAMEVFDSMGERNVYTWTSAVSGLA 411
Query: 111 NNNRIDVARKLFEVMP----EKNEVSWTAMLMGYTQCGRIQDAWELFKAM 156
N LF+ M E N V++ +L G + G + + F +M
Sbjct: 412 MNGMGRDCLALFKRMESTGVEPNGVTFVVVLRGCSMAGLVDEGRACFDSM 461
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 81/185 (43%), Gaps = 33/185 (17%)
Query: 248 QVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDI-------------- 293
VHA +R D +V S ++MY G++ + F AS D+
Sbjct: 223 SVHASALRHGHAGDPHVQSGAVSMYAAAGDVGAARAAFAEIASPDVVCVTAMVGALATGG 282
Query: 294 -----------------VMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLS 336
V WN++I+GY G ++L++F EM +G +VTLV L+
Sbjct: 283 EADAARELFDGMPQRDHVAWNAMIAGYVHTGRSREALRLFDEMRHAGAAVGEVTLVSALT 342
Query: 337 ACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDA 396
AC+ G ++ G+ + S+ + T A ++D+ + G V AM++ ++M E +
Sbjct: 343 ACAQLGALERGKWVHSCAHSRGMRLSVTLGTA-LIDMYSKCGAVAAAMEVFDSMG-ERNV 400
Query: 397 IIWGS 401
W S
Sbjct: 401 YTWTS 405
>gi|15221306|ref|NP_177601.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169836|sp|Q9CA54.1|PP122_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g74630
gi|12324801|gb|AAG52363.1|AC011765_15 hypothetical protein; 86841-88772 [Arabidopsis thaliana]
gi|332197495|gb|AEE35616.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 643
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 222/617 (35%), Positives = 344/617 (55%), Gaps = 55/617 (8%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRL- 59
PE + + +VRGY E + +F +M K V F+ + +++ R L
Sbjct: 65 FPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKA-VENFRSLR 123
Query: 60 --FDMMP-------EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYV 110
F M E + T ++ Y G V+ R++FDEM + N+++W +I+
Sbjct: 124 TGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACF 183
Query: 111 NNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILG 170
N + AR++F+ M +N SW ML GY + G ++ A +F MP + V+ ++MI+G
Sbjct: 184 RGNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVG 243
Query: 171 LGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSL 230
+ NG ++ + F + +Q+ G+ N SL
Sbjct: 244 IAHNGSFNESFLYFRE-------------------------------LQRAGMSPNEVSL 272
Query: 231 ISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFAS 290
VLS C+ S + G+ +H + + + V V + LI MY +CG + +L+F+
Sbjct: 273 TGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQE 332
Query: 291 KD-IVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGRE 349
K IV W S+I+G A +G GE+++++F+EM + GV PD ++ + +L ACS+ G ++EG +
Sbjct: 333 KRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGED 392
Query: 350 IFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTH 409
F MK Y +EP+ EHY CMVDL GR+G+++ A I MP P AI+W +LLGAC +H
Sbjct: 393 YFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSH 452
Query: 410 MKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSW 469
++LAE ++L +L+P N+G +LLSN YA+ G++ DVA +RK+M + + K S
Sbjct: 453 GNIELAEQVKQRLNELDPNNSGDLVLLSNAYATAGKWKDVASIRKSMIVQRIKKTTAWSL 512
Query: 470 IEVEKKVHMFT------GRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEE 523
+EV K ++ FT G D +H ++ E I L EAGY P+ + L+DV+EE
Sbjct: 513 VEVGKTMYKFTAGEKKKGIDIEAHE------KLKEIILRLKDEAGYTPEVASALYDVEEE 566
Query: 524 EKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDA 583
EK + HSEKLA+A+ L +L +G IR++KNLR+C DCH+ +KL SKV G EI++RD
Sbjct: 567 EKEDQVSKHSEKLALAFALARLSKGANIRIVKNLRICRDCHAVMKLTSKVYGVEILVRDR 626
Query: 584 NRFHHFKDGLCSCRDYW 600
NRFH FKDG CSCRDYW
Sbjct: 627 NRFHSFKDGSCSCRDYW 643
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 82/182 (45%), Gaps = 14/182 (7%)
Query: 231 ISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDN--- 287
+S+L+ C +L +L Q+H ++ D D Y LI + C + L +
Sbjct: 9 LSLLNSCKNLRALT---QIHGLFIKYGVDTDSYFTGKLI---LHCAISISDALPYARRLL 62
Query: 288 --FASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSG-VMPDDVTLVGVLSACSYTGKV 344
F D M+N+++ GY++ S+ VF EM G V PD + V+ A +
Sbjct: 63 LCFPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSL 122
Query: 345 KEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLG 404
+ G ++ K+ +E ++ + G G VE A K+ + M +P+ + W +++
Sbjct: 123 RTGFQM-HCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEM-HQPNLVAWNAVIT 180
Query: 405 AC 406
AC
Sbjct: 181 AC 182
>gi|224125332|ref|XP_002329779.1| predicted protein [Populus trichocarpa]
gi|222870841|gb|EEF07972.1| predicted protein [Populus trichocarpa]
Length = 585
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 210/537 (39%), Positives = 315/537 (58%), Gaps = 21/537 (3%)
Query: 79 CQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLM 138
C G + R+IF +P + +T++I ++ + F + VS +
Sbjct: 55 CAAGSISYTRQIFLAVPNPDSFLFTSLIKSTSKSHNFSIYSLYFYSRMVLSNVSPS---- 110
Query: 139 GYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQN--------------GEVQKARVVF 184
YT I+ +L A+ VV + ++ G G + G++ AR VF
Sbjct: 111 NYTFTSVIKSCADL-SALKHGRVVHGHVLVHGFGLDVYVQAALVALYGKCGDLINARKVF 169
Query: 185 DQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLD 244
D++RE+ W+ MI YE+ G+ E I LF M++ GV + + +SVLS CA L +
Sbjct: 170 DKIRERSIVAWNSMISGYEQNGFAKEAIGLFDRMKETGVEPDSATFVSVLSACAHLGAFS 229
Query: 245 HGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYA 304
G VH +V D++V + + LI MYI+CG + K + +FD+ +++V W ++ISGY
Sbjct: 230 LGCWVHEYIVGNGLDLNVVLGTSLINMYIRCGNVSKAREVFDSMKERNVVAWTAMISGYG 289
Query: 305 QYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKT 364
G G +++++FHEM +G+ P+ +T V VLSAC++ G V EGR +F S++ +Y + P
Sbjct: 290 TNGYGSQAVELFHEMRRNGLFPNSITFVAVLSACAHAGLVNEGRRLFASIREEYHLVPGV 349
Query: 365 EHYACMVDLLGRAGQVEDAMKLI-EAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLL 423
EH C+VD+LGRAG +++A I E +P P I ++LGAC+ H DL A+ LL
Sbjct: 350 EHNVCLVDMLGRAGLLDEAYNFIKEEIPENPAPAILTAMLGACKMHKNFDLGAQVAEHLL 409
Query: 424 QLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRD 483
EP+N Y++LSNIYA GR V +R NM ++ + K G S +EV++K ++F+ D
Sbjct: 410 AAEPENPAHYVILSNIYALAGRMDQVEIVRNNMIRKCLKKQVGYSTVEVDQKTYLFSMGD 469
Query: 484 CVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLV 543
SH E I L+++ EAGY P S V+H+++EEE+ ++LRYHSEKLA+A+GL+
Sbjct: 470 -KSHSETNAIYHYLDELMWKCSEAGYVPVSDSVMHELEEEEREYALRYHSEKLAIAFGLL 528
Query: 544 KLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
K G PIR++KNLR+C DCHSAIK IS + REII+RD RFHHFK G CSC DYW
Sbjct: 529 KTSHGTPIRIVKNLRMCEDCHSAIKFISAISSREIIVRDKLRFHHFKVGSCSCLDYW 585
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 100/195 (51%), Gaps = 8/195 (4%)
Query: 67 DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMP 126
DV Q +V Y + G + R++FD++ ++++++W +MISGY N A LF+ M
Sbjct: 145 DVYVQAALVALYGKCGDLINARKVFDKIRERSIVAWNSMISGYEQNGFAKEAIGLFDRMK 204
Query: 127 EK----NEVSWTAMLMGYTQCGRIQ-DAW--ELFKAMPMK-SVVASNSMILGLGQNGEVQ 178
E + ++ ++L G W E + +VV S+I + G V
Sbjct: 205 ETGVEPDSATFVSVLSACAHLGAFSLGCWVHEYIVGNGLDLNVVLGTSLINMYIRCGNVS 264
Query: 179 KARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCA 238
KAR VFD M+E++ W+ MI Y GY + ++LF M++ G+ N + ++VLS CA
Sbjct: 265 KAREVFDSMKERNVVAWTAMISGYGTNGYGSQAVELFHEMRRNGLFPNSITFVAVLSACA 324
Query: 239 SLASLDHGRQVHAQL 253
++ GR++ A +
Sbjct: 325 HAGLVNEGRRLFASI 339
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 83/168 (49%), Gaps = 16/168 (9%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEK----------NVVSWTVMLGGFIRDSR 52
ER++V+W +M+ GY + G EA LF +M E +V+S LG F
Sbjct: 174 ERSIVAWNSMISGYEQNGFAKEAIGLFDRMKETGVEPDSATFVSVLSACAHLGAFSLGCW 233
Query: 53 IDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+ + + + +VV T+++ Y + G V + RE+FD M ++NV++WT MISGY N
Sbjct: 234 VHE--YIVGNGLDLNVVLGTSLINMYIRCGNVSKAREVFDSMKERNVVAWTAMISGYGTN 291
Query: 113 NRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAM 156
A +LF M N +++ A+L G + + LF ++
Sbjct: 292 GYGSQAVELFHEMRRNGLFPNSITFVAVLSACAHAGLVNEGRRLFASI 339
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 79/179 (44%), Gaps = 43/179 (24%)
Query: 55 DARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKK----------------- 97
+AR++FD + E+ +VA +M+ GY Q+G E +FD M +
Sbjct: 164 NARKVFDKIRERSIVAWNSMISGYEQNGFAKEAIGLFDRMKETGVEPDSATFVSVLSACA 223
Query: 98 ----------------------NVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTA 135
NV+ T++I+ Y+ + AR++F+ M E+N V+WTA
Sbjct: 224 HLGAFSLGCWVHEYIVGNGLDLNVVLGTSLINMYIRCGNVSKAREVFDSMKERNVVAWTA 283
Query: 136 MLMGYTQCGRIQDAWELFKAMPMKSVVASN----SMILGLGQNGEVQKARVVFDQMREK 190
M+ GY G A ELF M + ++ +++ G V + R +F +RE+
Sbjct: 284 MISGYGTNGYGSQAVELFHEMRRNGLFPNSITFVAVLSACAHAGLVNEGRRLFASIREE 342
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 70/161 (43%), Gaps = 16/161 (9%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEK----NVVSWTVMLGGFIRDSRIDDA 56
M ERNVV+WTAM+ GY G ++A LF +M N +++ +L +++
Sbjct: 273 MKERNVVAWTAMISGYGTNGYGSQAVELFHEMRRNGLFPNSITFVAVLSACAHAGLVNEG 332
Query: 57 RRLFDMMPEK-----DVVAQTNMVLGYCQDGRVDEGRE-IFDEMPKKNVISWTTMISGYV 110
RRLF + E+ V +V + G +DE I +E+P+ + T + G
Sbjct: 333 RRLFASIREEYHLVPGVEHNVCLVDMLGRAGLLDEAYNFIKEEIPENPAPAILTAMLGAC 392
Query: 111 NNNR-----IDVARKLFEVMPEKNEVSWTAMLMGYTQCGRI 146
++ VA L PE N + + Y GR+
Sbjct: 393 KMHKNFDLGAQVAEHLLAAEPE-NPAHYVILSNIYALAGRM 432
>gi|224091973|ref|XP_002309422.1| predicted protein [Populus trichocarpa]
gi|222855398|gb|EEE92945.1| predicted protein [Populus trichocarpa]
Length = 582
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 204/541 (37%), Positives = 321/541 (59%), Gaps = 17/541 (3%)
Query: 71 QTNMVLGYCQDGRVDEGREIFDEMP--KKNVISWTTMISGYVNNNRIDVARKLFEVMPEK 128
QT+++ Y + +D R++FDE P +K + + +++SGY N+R+ LF M E
Sbjct: 48 QTSLISMYGKCSLIDNARKLFDENPQSRKLTVCYNSLLSGYALNSRVKDVVVLFCEMREL 107
Query: 129 N-EVSWTAMLMGYTQCGRIQD--------AWELFKAMPMKSVVASNSMILGLGQNGEVQK 179
E++ ML CG + + + + M S V N ++ ++GE+
Sbjct: 108 GVEINGVTMLGLVQPCGIPGNLGLGMCVHGFCVKFGLDMDSSVG-NCLLTMYVKSGEIDC 166
Query: 180 ARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCAS 239
R +FD+M K TW+ MI Y + G V++L+ M+ +G + +L+ VLS CA
Sbjct: 167 GRKLFDEMPRKGLITWNAMINGYAQNGLANNVLELYKEMESKGFCPDPLTLVGVLSSCAH 226
Query: 240 LASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSI 299
L +L G++V ++ F + ++ + L+ MY +CG L K + IFD K +V W +I
Sbjct: 227 LGALSVGKEVERKMEGFGFSSNPFLNNALVNMYARCGNLKKARDIFDGMPVKSVVSWTAI 286
Query: 300 ISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYL 359
I GY +G GE ++ +F EM G+ PD V VLSACS+ G +G + F M+ KY
Sbjct: 287 IGGYGMHGQGEVAVGLFDEMIRGGIKPDGTAFVSVLSACSHAGLTNKGLDYFGVMERKYG 346
Query: 360 VEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAA 419
+ P EHY+CMVDLLGRAG++ +A +LIE+M D +WG+LLGAC+ H ++LAE+A
Sbjct: 347 LRPGAEHYSCMVDLLGRAGRLNEARELIESMQVRADGALWGALLGACKIHRNVELAELAF 406
Query: 420 KKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMF 479
+++++LEP N G Y+LLSN+Y G + +R MRKR + K PGCS++E + +VH+F
Sbjct: 407 EQVIELEPTNTGYYVLLSNVYTEAGNLEGILRVRMLMRKRKLKKDPGCSYVEFKGRVHLF 466
Query: 480 TGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVA 539
D +HP+ I + L ++ L+++ C + H+ EE ++S+ HSEKLAVA
Sbjct: 467 FAGD-RNHPQTNEIYKKLNELENLVKDLDGCKKND---HE-RREEYLNSMGVHSEKLAVA 521
Query: 540 YGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDY 599
+ L+ + I ++KNLR+CGDCH IKL+SK++ R+ ++RDA RFHHFK+G CSC++Y
Sbjct: 522 FALLNTRKETEIIIIKNLRICGDCHLFIKLVSKIVDRQFVVRDATRFHHFKNGFCSCKEY 581
Query: 600 W 600
W
Sbjct: 582 W 582
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 122/286 (42%), Gaps = 49/286 (17%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPE--KNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKD 67
T+++ Y + +I A LF + P+ K V + +L G+ +SR+ D LF M E
Sbjct: 49 TSLISMYGKCSLIDNARKLFDENPQSRKLTVCYNSLLSGYALNSRVKDVVVLFCEMRELG 108
Query: 68 VVAQTNMVLG---------------------------------------YCQDGRVDEGR 88
V +LG Y + G +D GR
Sbjct: 109 VEINGVTMLGLVQPCGIPGNLGLGMCVHGFCVKFGLDMDSSVGNCLLTMYVKSGEIDCGR 168
Query: 89 EIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCG 144
++FDEMP+K +I+W MI+GY N + +L++ M K + ++ +L G
Sbjct: 169 KLFDEMPRKGLITWNAMINGYAQNGLANNVLELYKEMESKGFCPDPLTLVGVLSSCAHLG 228
Query: 145 RIQDAWELFKAMP----MKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIK 200
+ E+ + M + +N+++ + G ++KAR +FD M K +W+ +I
Sbjct: 229 ALSVGKEVERKMEGFGFSSNPFLNNALVNMYARCGNLKKARDIFDGMPVKSVVSWTAIIG 288
Query: 201 VYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHG 246
Y G + LF M + G++ + + +SVLS C+ + G
Sbjct: 289 GYGMHGQGEVAVGLFDEMIRGGIKPDGTAFVSVLSACSHAGLTNKG 334
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 106/222 (47%), Gaps = 13/222 (5%)
Query: 41 TVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNV- 99
+L +++ ID R+LFD MP K ++ M+ GY Q+G + E++ EM K
Sbjct: 152 NCLLTMYVKSGEIDCGRKLFDEMPRKGLITWNAMINGYAQNGLANNVLELYKEMESKGFC 211
Query: 100 ---ISWTTMISGYVNNNRIDVARKLFEVMP----EKNEVSWTAMLMGYTQCGRIQDAWEL 152
++ ++S + + V +++ M N A++ Y +CG ++ A ++
Sbjct: 212 PDPLTLVGVLSSCAHLGALSVGKEVERKMEGFGFSSNPFLNNALVNMYARCGNLKKARDI 271
Query: 153 FKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQM----REKDDATWSGMIKVYERKGYE 208
F MP+KSVV+ ++I G G +G+ + A +FD+M + D + ++ G
Sbjct: 272 FDGMPVKSVVSWTAIIGGYGMHGQGEVAVGLFDEMIRGGIKPDGTAFVSVLSACSHAGLT 331
Query: 209 LEVIDLFTLMQKE-GVRVNFPSLISVLSVCASLASLDHGRQV 249
+ +D F +M+++ G+R ++ + L+ R++
Sbjct: 332 NKGLDYFGVMERKYGLRPGAEHYSCMVDLLGRAGRLNEAREL 373
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 100/219 (45%), Gaps = 22/219 (10%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEK----------NVVSWTVMLGGFIRD 50
MP + +++W AM+ GY + G+ L+ +M K V+S LG
Sbjct: 174 MPRKGLITWNAMINGYAQNGLANNVLELYKEMESKGFCPDPLTLVGVLSSCAHLGALSVG 233
Query: 51 SRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYV 110
++ R++ + +V Y + G + + R+IFD MP K+V+SWT +I GY
Sbjct: 234 KEVE--RKMEGFGFSSNPFLNNALVNMYARCGNLKKARDIFDGMPVKSVVSWTAIIGGYG 291
Query: 111 NNNRIDVARKLFEVM----PEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNS 166
+ + +VA LF+ M + + ++ ++L + G + F M K + +
Sbjct: 292 MHGQGEVAVGLFDEMIRGGIKPDGTAFVSVLSACSHAGLTNKGLDYFGVMERKYGLRPGA 351
Query: 167 -----MILGLGQNGEVQKARVVFDQMREK-DDATWSGMI 199
M+ LG+ G + +AR + + M+ + D A W ++
Sbjct: 352 EHYSCMVDLLGRAGRLNEARELIESMQVRADGALWGALL 390
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 95/188 (50%), Gaps = 4/188 (2%)
Query: 218 MQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGE 277
M + G N + + CA+L+ G+Q+H + + ++ +V + LI+MY KC
Sbjct: 1 MLRSGASPNAFTFPFAIKSCAALSLPITGKQLHCHVFKTGCLLEPFVQTSLISMYGKCSL 60
Query: 278 LVKGKLIFD-NFASKDI-VMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVL 335
+ + +FD N S+ + V +NS++SGYA + + +F EM GV + VT++G++
Sbjct: 61 IDNARKLFDENPQSRKLTVCYNSLLSGYALNSRVKDVVVLFCEMRELGVEINGVTMLGLV 120
Query: 336 SACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPD 395
C G + G + K+ ++ + C++ + ++G+++ KL + MP
Sbjct: 121 QPCGIPGNLGLGMCV-HGFCVKFGLDMDSSVGNCLLTMYVKSGEIDCGRKLFDEMP-RKG 178
Query: 396 AIIWGSLL 403
I W +++
Sbjct: 179 LITWNAMI 186
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 71/152 (46%), Gaps = 9/152 (5%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMM----PE 65
A+V Y G + +A +F MP K+VVSWT ++GG+ + + A LFD M +
Sbjct: 253 NALVNMYARCGNLKKARDIFDGMPVKSVVSWTAIIGGYGMHGQGEVAVGLFDEMIRGGIK 312
Query: 66 KDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVI-----SWTTMISGYVNNNRIDVARK 120
D A +++ G ++G + F M +K + ++ M+ R++ AR+
Sbjct: 313 PDGTAFVSVLSACSHAGLTNKGLDYFGVMERKYGLRPGAEHYSCMVDLLGRAGRLNEARE 372
Query: 121 LFEVMPEKNEVSWTAMLMGYTQCGRIQDAWEL 152
L E M + + + L+G + R + EL
Sbjct: 373 LIESMQVRADGALWGALLGACKIHRNVELAEL 404
>gi|357521373|ref|XP_003630975.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524997|gb|AET05451.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 701
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 214/561 (38%), Positives = 312/561 (55%), Gaps = 42/561 (7%)
Query: 50 DSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVI---SWTTMI 106
+S ID +++FDMMP +DVV+ ++ G+ Q+G E ++ EM K + S+T
Sbjct: 173 ESGIDCVKKVFDMMPVRDVVSWNTVIAGFAQNGMYVEALDMVREMGKNGKLKPDSFTLSS 232
Query: 107 SGYVNNNRIDVAR-KLFEVMPEKNEVSW-----TAMLMGYTQCGRIQDAWELFKAMPMKS 160
+ +DV + K +N ++++ Y +C R++ + F +P K
Sbjct: 233 ILPIFAEHVDVNKGKEIHGYAVRNGFDGDVFIGSSLIDMYAKCNRLECSLRAFYILPRKD 292
Query: 161 VVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQK 220
++ NS+I G QNGE + + F M K
Sbjct: 293 AISWNSIIAGCVQNGEFDRG-------------------------------LGFFRRMLK 321
Query: 221 EGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVK 280
E V+ S SV+ CA L +L GRQ+H +VR FD + ++AS L+ MY KCG +
Sbjct: 322 ENVKPMAVSFSSVIPACAHLTALSLGRQLHGCIVRLGFDDNEFIASSLVDMYAKCGNIKM 381
Query: 281 GKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSY 340
+ +FD +D+V W +II G A +G ++ +F M GV P V + VL+ACS+
Sbjct: 382 ARYVFDRIDKRDMVAWTAIIMGCAMHGHALDAVSLFENMLEDGVRPCYVAFMAVLTACSH 441
Query: 341 TGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAM-PFEPDAIIW 399
G V EG F SM+ + + P EHYA + DLLGRAG++E+A I M +P +W
Sbjct: 442 AGLVDEGWRYFNSMERDFGIAPGLEHYAAVADLLGRAGRLEEAYDFISNMRGVQPTGSVW 501
Query: 400 GSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKR 459
LL ACR H ++LAE KLL ++ +N G Y+L+SNIY++ R+ D A LR +MRK+
Sbjct: 502 SILLAACRAHKSVELAEKVLDKLLSVDSENMGAYVLMSNIYSAAQRWKDAARLRIHMRKK 561
Query: 460 NVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHD 519
+ K P CSWIEV +VH F D SHP + I + L+ + + + GY D++ VLHD
Sbjct: 562 GLKKTPACSWIEVGNQVHTFMAGD-KSHPYYDKINKALDVLLEQMEKEGYVIDTNQVLHD 620
Query: 520 VDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREII 579
VDEE K L HSE+LA+AYG++ G IRV+KN+RVC DCH+AIK I+K++GREI
Sbjct: 621 VDEELKRELLHNHSERLAIAYGIISTTAGTTIRVIKNIRVCADCHTAIKFITKIVGREIT 680
Query: 580 LRDANRFHHFKDGLCSCRDYW 600
+RD +RFHHFK+G CSC DYW
Sbjct: 681 VRDNSRFHHFKNGSCSCGDYW 701
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 127/267 (47%), Gaps = 16/267 (5%)
Query: 144 GRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYE 203
+ +A ++F P + G++G + + VFD M +D +W+ +I +
Sbjct: 156 AKFHNAGKVFDVFPKR------------GESG-IDCVKKVFDMMPVRDVVSWNTVIAGFA 202
Query: 204 RKGYELEVIDLFTLMQKEG-VRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDV 262
+ G +E +D+ M K G ++ + +L S+L + A ++ G+++H VR FD DV
Sbjct: 203 QNGMYVEALDMVREMGKNGKLKPDSFTLSSILPIFAEHVDVNKGKEIHGYAVRNGFDGDV 262
Query: 263 YVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSS 322
++ S LI MY KC L F KD + WNSII+G Q G ++ L F M
Sbjct: 263 FIGSSLIDMYAKCNRLECSLRAFYILPRKDAISWNSIIAGCVQNGEFDRGLGFFRRMLKE 322
Query: 323 GVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVED 382
V P V+ V+ AC++ + GR++ + + + + +VD+ + G ++
Sbjct: 323 NVKPMAVSFSSVIPACAHLTALSLGRQLHGCI-VRLGFDDNEFIASSLVDMYAKCGNIKM 381
Query: 383 AMKLIEAMPFEPDAIIWGSLLGACRTH 409
A + + + + D + W +++ C H
Sbjct: 382 ARYVFDRID-KRDMVAWTAIIMGCAMH 407
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 125/264 (47%), Gaps = 19/264 (7%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEK-----NVVSWTVMLGGFIRDSRIDD 55
MP R+VVSW ++ G+ + GM EA + +M + + + + +L F ++
Sbjct: 186 MPVRDVVSWNTVIAGFAQNGMYVEALDMVREMGKNGKLKPDSFTLSSILPIFAEHVDVNK 245
Query: 56 ARRLFDMMP----EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVN 111
+ + + DV ++++ Y + R++ F +P+K+ ISW ++I+G V
Sbjct: 246 GKEIHGYAVRNGFDGDVFIGSSLIDMYAKCNRLECSLRAFYILPRKDAISWNSIIAGCVQ 305
Query: 112 NNRIDVARKLFEVMPEKN----EVSWTAMLMGYTQCGRIQDAWELFKAMPM-----KSVV 162
N D F M ++N VS+++++ + +L + +
Sbjct: 306 NGEFDRGLGFFRRMLKENVKPMAVSFSSVIPACAHLTALSLGRQLHGCIVRLGFDDNEFI 365
Query: 163 ASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEG 222
AS S++ + G ++ AR VFD++ ++D W+ +I G+ L+ + LF M ++G
Sbjct: 366 AS-SLVDMYAKCGNIKMARYVFDRIDKRDMVAWTAIIMGCAMHGHALDAVSLFENMLEDG 424
Query: 223 VRVNFPSLISVLSVCASLASLDHG 246
VR + + ++VL+ C+ +D G
Sbjct: 425 VRPCYVAFMAVLTACSHAGLVDEG 448
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 109/239 (45%), Gaps = 24/239 (10%)
Query: 194 TWSGMIKVYERKGYELEVIDLFTLMQKEGVRVN---FPSLISVLSVCASLASLDHGRQVH 250
WS +IK Y F M+ V N FPSL+ ++ L +H
Sbjct: 77 AWSSIIKCYTSHSLLHLSFSSFNSMRSLSVPPNRHVFPSLLKASTL---LKHHKLAHSLH 133
Query: 251 AQLVRCQFDVDVYVASVLITMYIK---CGELV-----KG-------KLIFDNFASKDIVM 295
A VR D D+Y+A+ LI Y K G++ +G K +FD +D+V
Sbjct: 134 ACTVRLGLDSDLYIANALINTYAKFHNAGKVFDVFPKRGESGIDCVKKVFDMMPVRDVVS 193
Query: 296 WNSIISGYAQYGLGEKSLKVFHEMFSSGVM-PDDVTLVGVLSACSYTGKVKEGREIFESM 354
WN++I+G+AQ G+ ++L + EM +G + PD TL +L + V +G+EI
Sbjct: 194 WNTVIAGFAQNGMYVEALDMVREMGKNGKLKPDSFTLSSILPIFAEHVDVNKGKEI-HGY 252
Query: 355 KSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLD 413
+ + + ++D+ + ++E +++ +P DAI W S++ C + + D
Sbjct: 253 AVRNGFDGDVFIGSSLIDMYAKCNRLECSLRAFYILP-RKDAISWNSIIAGCVQNGEFD 310
>gi|326497609|dbj|BAK05894.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 214/612 (34%), Positives = 343/612 (56%), Gaps = 19/612 (3%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQMP---EKNVVSWTVMLGGFIRDSRIDDARRLFD 61
++ +W A++ + EA +F +P + ++T+ L R + + D
Sbjct: 68 SIPAWNALLAAHSRGASPHEALRVFRALPPAARPDSTTFTLALSACARLGDLATGEVVTD 127
Query: 62 MMPE----KDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDV 117
D+ ++++ Y + G +D+ ++FD M K++ ++W+TM++G+VN +
Sbjct: 128 RASGAGYGNDIFVCSSVLNLYAKCGAMDDAVKVFDRMRKRDRVTWSTMVTGFVNAGQPVQ 187
Query: 118 ARKLFEVMPEKNEVSWTAMLMGYTQ-CGRIQDA--------WELFKAMPMKSVVASNSMI 168
A +++ M + +++G Q C DA + L AM M VV S S++
Sbjct: 188 AIEMYMRMRRDGLEADEVVIVGVMQACAATGDARMGASVHGYLLRHAMQMD-VVISTSLV 246
Query: 169 LGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFP 228
+NG +AR VF+ M ++D +WS +I + G E + LF +MQ G+ N
Sbjct: 247 DMYAKNGLFDQARRVFELMPHRNDVSWSALISQLAQYGNADEALGLFRMMQVSGLHPNSG 306
Query: 229 SLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNF 288
++ L C+ L L G+ +H ++R ++D V + +I MY KCG L +++FD
Sbjct: 307 PVVGALLACSDLGLLKLGKSIHGFILR-TLELDRMVGTAVIDMYSKCGSLSSAQMLFDKV 365
Query: 289 ASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGR 348
S+D++ WN +I+ +G G +L +F EM + V PD T +LSA S++G V+EG+
Sbjct: 366 VSRDLISWNVMIACCGAHGRGRDALSLFQEMKRNEVRPDHATFASLLSALSHSGLVEEGK 425
Query: 349 EIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRT 408
F M ++Y +EP +H C+VDLL R+G VE+A L+ ++ +P I +LL C
Sbjct: 426 FWFNCMVNEYGIEPGEKHLVCIVDLLARSGLVEEANGLVASLHSKPTISILVALLSGCLN 485
Query: 409 HMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCS 468
+ KL+L E A+K+L+L+P + G L+SN+YA+ ++ V E+RK M+ K PGCS
Sbjct: 486 NNKLELGESTAEKILELQPGDVGVLALVSNLYAAAKNWYKVREVRKLMKDHGSKKAPGCS 545
Query: 469 WIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHS 528
IE+ +H F D SHP+H I++M+ K+ +R+ GY P + FV HD++E K
Sbjct: 546 SIEIRGALHTFVMED-QSHPQHRQILQMVMKLDSEMRKMGYIPKTEFVYHDLEEGVKEQL 604
Query: 529 LRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHH 588
L HSE+LA A+GL+ G + V+KNLRVCGDCH AIK +SK+ REI++RDA RFHH
Sbjct: 605 LSRHSERLATAFGLLNTSPGTRLVVIKNLRVCGDCHDAIKYMSKIADREIVVRDAKRFHH 664
Query: 589 FKDGLCSCRDYW 600
FKDG CSC DYW
Sbjct: 665 FKDGACSCGDYW 676
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 122/255 (47%), Gaps = 22/255 (8%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRD-SRIDDARR- 58
M +R+ V+W+ MV G+V G +A ++ +M + + V++ G ++ + DAR
Sbjct: 164 MRKRDRVTWSTMVTGFVNAGQPVQAIEMYMRMRRDGLEADEVVIVGVMQACAATGDARMG 223
Query: 59 ------LFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
L + DVV T++V Y ++G D+ R +F+ MP +N +SW+ +IS
Sbjct: 224 ASVHGYLLRHAMQMDVVISTSLVDMYAKNGLFDQARRVFELMPHRNDVSWSALISQLAQY 283
Query: 113 NRIDVARKLFEVM------PEKNEVSWTAML---MGYTQCGRIQDAWELFKAMPMKSVVA 163
D A LF +M P V + +G + G+ + + + + + +V
Sbjct: 284 GNADEALGLFRMMQVSGLHPNSGPVVGALLACSDLGLLKLGKSIHGF-ILRTLELDRMVG 342
Query: 164 SNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGV 223
+ ++I + G + A+++FD++ +D +W+ MI G + + LF M++ V
Sbjct: 343 T-AVIDMYSKCGSLSSAQMLFDKVVSRDLISWNVMIACCGAHGRGRDALSLFQEMKRNEV 401
Query: 224 R---VNFPSLISVLS 235
R F SL+S LS
Sbjct: 402 RPDHATFASLLSALS 416
>gi|62318827|dbj|BAD93880.1| hypothetical protein [Arabidopsis thaliana]
gi|62318835|dbj|BAD93890.1| hypothetical protein [Arabidopsis thaliana]
Length = 635
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 219/611 (35%), Positives = 342/611 (55%), Gaps = 43/611 (7%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRL- 59
PE + + +VRGY E + +F +M K V F+ + +++ R L
Sbjct: 57 FPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKA-VENFRSLR 115
Query: 60 --FDMMP-------EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYV 110
F M E + T ++ Y G V+ R++FDEM + N+++W +I+
Sbjct: 116 TGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACF 175
Query: 111 NNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILG 170
N + AR++F+ M +N SW ML GY + G ++ A +F MP + V+ ++MI+G
Sbjct: 176 RGNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVG 235
Query: 171 LGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSL 230
+ NG ++ + F + +Q+ G+ N SL
Sbjct: 236 IAHNGSFNESFLYFRE-------------------------------LQRAGMSPNEVSL 264
Query: 231 ISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFAS 290
VLS C+ S + G+ +H + + + V V + LI MY +CG + +L+F+
Sbjct: 265 TGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQE 324
Query: 291 KD-IVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGRE 349
K IV W S+I+G A +G GE+++++F+EM + GV PD ++ + +L ACS+ G ++EG +
Sbjct: 325 KRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGED 384
Query: 350 IFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTH 409
F MK Y +EP+ EHY CMVDL GR+G+++ A I MP P AI+W +LLGAC +H
Sbjct: 385 YFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSH 444
Query: 410 MKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSW 469
++LAE ++L +L+P N+G +LLSN YA+ G++ DVA +RK+M + + K S
Sbjct: 445 GNIELAEQVKQRLNELDPNNSGDLVLLSNAYATAGKWKDVASIRKSMIVQRIKKTTAWSL 504
Query: 470 IEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSL 529
+EV K ++ FT + + ++ E I L EAGY P+ + L+DV+EEEK +
Sbjct: 505 VEVGKTMYKFTAGEKKKGIDIEAHEKLKEIILRLKDEAGYTPEVASALYDVEEEEKEDQV 564
Query: 530 RYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHF 589
HSEKLA+A+ L +L +G IR++KNLR+C DCH+ +KL SKV G EI++RD NRFH F
Sbjct: 565 SKHSEKLALAFALARLSKGANIRIVKNLRICRDCHAVMKLTSKVYGVEILVRDRNRFHSF 624
Query: 590 KDGLCSCRDYW 600
KDG CSCRDYW
Sbjct: 625 KDGSCSCRDYW 635
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 82/182 (45%), Gaps = 14/182 (7%)
Query: 231 ISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDN--- 287
+S+L+ C +L +L Q+H ++ D D Y LI + C + L +
Sbjct: 1 LSLLNSCKNLRALT---QIHGLFIKYGVDTDSYFTGKLI---LHCAISISDALPYARRLL 54
Query: 288 --FASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSG-VMPDDVTLVGVLSACSYTGKV 344
F D M+N+++ GY++ S+ VF EM G V PD + V+ A +
Sbjct: 55 LCFPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSL 114
Query: 345 KEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLG 404
+ G ++ K+ +E ++ + G G VE A K+ + M +P+ + W +++
Sbjct: 115 RTGFQM-HCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEM-HQPNLVAWNAVIT 172
Query: 405 AC 406
AC
Sbjct: 173 AC 174
>gi|125532437|gb|EAY79002.1| hypothetical protein OsI_34111 [Oryza sativa Indica Group]
Length = 847
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 223/625 (35%), Positives = 340/625 (54%), Gaps = 34/625 (5%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVV-----------SWTVMLGGFIR 49
MP RN VSWT +V G + M +A F M V + +
Sbjct: 232 MPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRFALSSAARAAAALGAPLRA 291
Query: 50 DSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGY 109
S A FD ++ +N+ Y + G + E +FD+MP+K+ ++WT MI GY
Sbjct: 292 RSCTASASVGFD----TELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGY 347
Query: 110 VNNNRIDVARKLFEVMPEKNEVSWTAMLMG--YTQCGRIQDAWE-------LFKAMPMKS 160
N ++ A F M + V + + G ++D W + KA
Sbjct: 348 AKNGSLEAAVLSFRDMKREGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELE 407
Query: 161 VVASNSMILGLGQNGEVQKARVVFDQMREKDDATW-----SGMIKVYERKGYELEVIDLF 215
V N++I ++ +V+ A V + D W + MI Y E + ++
Sbjct: 408 VAVRNALIDMYAKSMDVESASRVL----KIDPGGWNVVSGTSMIDGYIETDCVEEALVIY 463
Query: 216 TLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKC 275
++++GV N + S++ CA A L+ G Q+HAQ+++ D +V S L+ MY KC
Sbjct: 464 VELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKC 523
Query: 276 GELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVL 335
G + +F+ + + WN++I+ +AQ+G G ++++ F M SG+ P+ + V +L
Sbjct: 524 GLISLSMQLFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLL 583
Query: 336 SACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPD 395
+ACS+ G V EG + F SMK + +EPK EHY+C++D GRAG++++A K I MP +P+
Sbjct: 584 TACSHAGLVDEGLKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPIKPN 643
Query: 396 AIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKN 455
A W SLLGACR +L EVAA+ L++LEP N G ++ LS IYAS G++ DV +RK
Sbjct: 644 AYGWCSLLGACRMRGSKELGEVAAQNLMKLEPGNTGIHVSLSGIYASLGQWEDVKAVRKL 703
Query: 456 MRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSF 515
MR + K PG SW++ KK H+F D SHP+ I LE++ ++E GY PD+SF
Sbjct: 704 MRDSRIKKLPGFSWVDSNKKTHVFGSEDW-SHPQQKDIYEKLEELTTRIKEEGYIPDTSF 762
Query: 516 VLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMG 575
+ ++++ K LRYHSE++AVA+ L+ +P PI V KNLR+C DCH+A K I KV
Sbjct: 763 LPCNLEDIAKERILRYHSERIAVAFALISMPATKPIIVKKNLRICIDCHTAFKFICKVER 822
Query: 576 REIILRDANRFHHFKDGLCSCRDYW 600
R+II+RD +RFHHF +G CSC DYW
Sbjct: 823 RDIIVRDNSRFHHFVNGRCSCGDYW 847
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 85/361 (23%), Positives = 146/361 (40%), Gaps = 31/361 (8%)
Query: 107 SGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNS 166
+G + R+ AR + + ++ Y+ C + A LF AMP ++ V+ +
Sbjct: 33 AGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALRLFAAMPRRNAVSWTT 92
Query: 167 MILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYEL----------EVIDLFT 216
++ GL QN A F MR A +YE K + T
Sbjct: 93 LVSGLSQNLMHADALAAFAAMRRAGVAP---TRLIYETKFHNTLGPKHTLAASHCHSGPT 149
Query: 217 LMQKE-GVRVNFPS---------LISVLSVCASLASLDHGRQVHAQLVRC-QFDVDVYVA 265
LM K G R+ P L S+L C L GR +HA+LV ++A
Sbjct: 150 LMVKYWGQRLWRPPAPAAATTVHLASLLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLA 209
Query: 266 SVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVM 325
+ LITMY C +L +F ++ V W +++SG +Q + +L F M +GV
Sbjct: 210 NHLITMYSHCADLASALRLFAAMPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVA 269
Query: 326 PDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYAC--MVDLLGRAGQVEDA 383
P L A + G R S + TE + + D+ + G + +A
Sbjct: 270 PTRFALSSAARAAAALGAPLRARSCTASASVGF----DTELFVASNLADMYSKCGLLSEA 325
Query: 384 MKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQ 443
++ + MP + DA+ W +++ + L+ A ++ + + + A ++ S + AS
Sbjct: 326 CRVFDQMP-QKDAVAWTAMIDGYAKNGSLEAAVLSFRDMKREGLVGADQHVFCSVLSASG 384
Query: 444 G 444
G
Sbjct: 385 G 385
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/223 (21%), Positives = 80/223 (35%), Gaps = 50/223 (22%)
Query: 230 LISVLSVCASLASLDHGRQVHAQLVRC-QFDVDVYVASVLITMYIKCGELVKGKLIFDNF 288
L S+L C L GR +HA+LV ++A+ LITMY C +L +F
Sbjct: 23 LASLLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALRLFAAM 82
Query: 289 ASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMP---------------------- 326
++ V W +++SG +Q + +L F M +GV P
Sbjct: 83 PRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRLIYETKFHNTLGPKHTLAAS 142
Query: 327 --------------------------DDVTLVGVLSACSYTGKVKEGREIFESMKSKYLV 360
V L +L +C G ++ GR + +
Sbjct: 143 HCHSGPTLMVKYWGQRLWRPPAPAAATTVHLASLLQSCGRAGDLRRGRLLHARLVLSGAA 202
Query: 361 EPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
T ++ + + A++L AMP +A+ W +L+
Sbjct: 203 AASTFLANHLITMYSHCADLASALRLFAAMP-RRNAVSWTTLV 244
>gi|147800371|emb|CAN70930.1| hypothetical protein VITISV_000387 [Vitis vinifera]
Length = 773
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 197/528 (37%), Positives = 310/528 (58%), Gaps = 17/528 (3%)
Query: 82 GRVDEGREIFDE------MPKKNVISWTTMISGYVNNNRIDVARKLF-EVMPEKNEVSWT 134
GRVDE R +F++ +P+ W M GY N A L+ E++ + ++
Sbjct: 122 GRVDEARRVFEDGGEDVDLPES---VWVAMGIGYSRNGYPKEALLLYYEMVCQFGQLGNF 178
Query: 135 AMLMGYTQCGRIQDA-------WELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQM 187
A M C + D ++ KA V +N+++ ++G ++A +FD M
Sbjct: 179 AFSMALKACSDLGDLRTGRAVHAQVLKATEDPDQVVNNALLRLYSEDGCFEEALRMFDGM 238
Query: 188 REKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGR 247
++ +W+ +I +K E I+ F +MQ +G+ ++ +L ++L VCA + +L G+
Sbjct: 239 PHRNLVSWNSLIAGLVKKEGVFEAIEAFRIMQGKGMGFSWVTLTTILPVCARVTALGSGK 298
Query: 248 QVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYG 307
++HA +V+ D V + L+ MY KCG + + +F+ KD+ WN++I+GYA G
Sbjct: 299 EIHAVIVKSTAKPDAPVLNSLVDMYAKCGAMDYCRRVFNGMQGKDLTSWNTLITGYAING 358
Query: 308 LGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHY 367
++++ F EM SG PD +T + +LS CS+ G +G +FE MK + + P EHY
Sbjct: 359 RMTEAMESFQEMICSGFSPDGITFIALLSGCSHAGLADDGCRLFEMMKMDHGISPTVEHY 418
Query: 368 ACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEP 427
AC+VD+LGRAG++++A+++++ MPF+P IWGSLL +CR H + LAE AK+L +LEP
Sbjct: 419 ACLVDVLGRAGRIKEALEIVKNMPFKPTGSIWGSLLNSCRLHGNVPLAEAVAKRLFELEP 478
Query: 428 KNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSH 487
NAG Y++LSNIYA+ G + V +R+ M KR + K GCSW++++ K+H F
Sbjct: 479 NNAGNYVMLSNIYANAGMWESVKVVREFMEKRGMTKEAGCSWLQIKSKIHTFVAGGSNEF 538
Query: 488 PEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPE 547
++ +++ + E GY PD+ VLHDV EE + + HSE+LA + L+
Sbjct: 539 RNSVEYKKVWKRLMEAMEEVGYVPDTGVVLHDVSEEMRAMWVCGHSERLATMFALINTAS 598
Query: 548 GVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCS 595
G+PIR+ KNLRVC DCHS +K +SKV GR I+LRD NRFHHFKDG+CS
Sbjct: 599 GMPIRITKNLRVCVDCHSWVKTLSKVTGRVIVLRDTNRFHHFKDGVCS 646
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 118/285 (41%), Gaps = 38/285 (13%)
Query: 9 WTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDV 68
W AM GY G EA L+++M V LG F + L D+ + V
Sbjct: 145 WVAMGIGYSRNGYPKEALLLYYEM-----VCQFGQLGNFAFSMALKACSDLGDLRTGRAV 199
Query: 69 VAQ------------TNMVLG-YCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRI 115
AQ N +L Y +DG +E +FD MP +N++SW ++I+G V +
Sbjct: 200 HAQVLKATEDPDQVVNNALLRLYSEDGCFEEALRMFDGMPHRNLVSWNSLIAGLVKKEGV 259
Query: 116 DVARKLFEVMPEKN-EVSWTAMLMGYTQCGRIQ--DAWELFKAMPMKSVVAS-----NSM 167
A + F +M K SW + C R+ + + A+ +KS NS+
Sbjct: 260 FEAIEAFRIMQGKGMGFSWVTLTTILPVCARVTALGSGKEIHAVIVKSTAKPDAPVLNSL 319
Query: 168 ILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNF 227
+ + G + R VF+ M+ KD +W+ +I Y G E ++ F M G +
Sbjct: 320 VDMYAKCGAMDYCRRVFNGMQGKDLTSWNTLITGYAINGRMTEAMESFQEMICSGFSPDG 379
Query: 228 PSLISVLSVC--ASLAS----------LDHGRQVHAQLVRCQFDV 260
+ I++LS C A LA +DHG + C DV
Sbjct: 380 ITFIALLSGCSHAGLADDGCRLFEMMKMDHGISPTVEHYACLVDV 424
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 103/218 (47%), Gaps = 18/218 (8%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV----VSWTVMLGGFIRDSRIDDA 56
MP RN+VSW +++ G V++ + EA F M K + V+ T +L R + +
Sbjct: 238 MPHRNLVSWNSLIAGLVKKEGVFEAIEAFRIMQGKGMGFSWVTLTTILPVCARVTALGSG 297
Query: 57 RRLFDMM----PEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+ + ++ + D ++V Y + G +D R +F+ M K++ SW T+I+GY N
Sbjct: 298 KEIHAVIVKSTAKPDAPVLNSLVDMYAKCGAMDYCRRVFNGMQGKDLTSWNTLITGYAIN 357
Query: 113 NRIDVARKLFEVMP----EKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASN--- 165
R+ A + F+ M + +++ A+L G + G D LF+ M M ++
Sbjct: 358 GRMTEAMESFQEMICSGFSPDGITFIALLSGCSHAGLADDGCRLFEMMKMDHGISPTVEH 417
Query: 166 --SMILGLGQNGEVQKARVVFDQMREKDDAT-WSGMIK 200
++ LG+ G +++A + M K + W ++
Sbjct: 418 YACLVDVLGRAGRIKEALEIVKNMPFKPTGSIWGSLLN 455
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 90/182 (49%), Gaps = 13/182 (7%)
Query: 234 LSVCASLASLDHGRQVHAQLV----RCQFDV--DVYVASVLITMYIKCGELVKGKLIFDN 287
L C S +L+HG++++ QL+ RC ++ + + LIT++ CG + + + +F++
Sbjct: 74 LHSCISRKALEHGQRLYLQLLLYRDRCNHNLLNNPTLKGKLITLFSVCGRVDEARRVFED 133
Query: 288 FASKDI----VMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGK 343
+D+ +W ++ GY++ G +++L +++EM + L ACS G
Sbjct: 134 -GGEDVDLPESVWVAMGIGYSRNGYPKEALLLYYEMVCQFGQLGNFAFSMALKACSDLGD 192
Query: 344 VKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
++ GR + + K +P ++ L G E+A+++ + MP + + W SL+
Sbjct: 193 LRTGRAVHAQVL-KATEDPDQVVNNALLRLYSEDGCFEEALRMFDGMPHR-NLVSWNSLI 250
Query: 404 GA 405
Sbjct: 251 AG 252
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 27/40 (67%)
Query: 536 LAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMG 575
LA + L+ G+PIR+ KNL VC DCHS +K++SK G
Sbjct: 700 LATMFALINTASGMPIRITKNLHVCVDCHSWVKIVSKNTG 739
>gi|449508565|ref|XP_004163348.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g23330-like [Cucumis
sativus]
Length = 712
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 217/649 (33%), Positives = 344/649 (53%), Gaps = 61/649 (9%)
Query: 6 VVSWTAMVRGYVEEGMITEAGTLFWQM------PEKNVVSWTVMLGGFIRDSRIDDARRL 59
++W +++R Y G+ ++ F M P+ NV + + D + ++
Sbjct: 71 ALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNVFPSVLKSCALLMDLNLGESLHG 130
Query: 60 --------FDMMPEKDVVAQTNMVLGYCQDGRVDEGR-EIFDEMPKKNVISWTTMISGYV 110
FD+ ++ + + + GR G E+FDEM ++ T +
Sbjct: 131 YIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTRSVRTVSVLSE- 189
Query: 111 NNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQ----------------DAWELFK 154
D RK+FE+MPEK+ VSW ++ G + G + D++ L
Sbjct: 190 -----DSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIREMGGANLKPDSFTLSS 244
Query: 155 AMPM-----------------------KSVVASNSMILGLGQNGEVQKARVVFDQMREKD 191
+P+ + ++S+I + V + VF + E+D
Sbjct: 245 VLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERD 304
Query: 192 DATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHA 251
+W+ +I + G E + F M ++ S S++ CA L +L G+Q+H
Sbjct: 305 GISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHG 364
Query: 252 QLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEK 311
+ R FD ++++AS L+ MY KCG + K IFD +D+V W ++I G A +G
Sbjct: 365 YITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPD 424
Query: 312 SLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMV 371
++++F +M + G+ P+ V + VL+ACS+ G V E + F SM + + P EHYA +
Sbjct: 425 AIELFEQMETEGIKPNHVAFMAVLTACSHGGLVDEAWKYFNSMTRDFGIAPGVEHYAAVS 484
Query: 372 DLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAG 431
DLLGRAG++E+A I M P IW +LL ACR H +D+AE A ++L+++P N G
Sbjct: 485 DLLGRAGRLEEAYDFICGMHIGPTGSIWATLLSACRVHXNIDMAEKVANRILEVDPNNTG 544
Query: 432 PYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHP 491
YILL+NIY++ R+ + A+ R +MR+ + K P CSWIEV+ KV+ F D SHP +
Sbjct: 545 AYILLANIYSAARRWKEAAKWRASMRRIGIRKTPACSWIEVKNKVYAFMAGD-ESHPCYE 603
Query: 492 MIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPI 551
I +E + L+ + GY PD+S V HDV+EE+K + + HSE+LA+ +G++ P G+ I
Sbjct: 604 KIREAMEVLVELMEKEGYVPDTSEVHHDVEEEQKKYLVCSHSERLAIVFGIINTPAGMTI 663
Query: 552 RVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
RV KNLRVC DCH+A K ISK++GREI++RD +RFHHFK+G CSC DYW
Sbjct: 664 RVTKNLRVCTDCHTATKFISKIVGREIVVRDNSRFHHFKNGTCSCGDYW 712
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/302 (19%), Positives = 127/302 (42%), Gaps = 78/302 (25%)
Query: 1 MPERNVVSWTAMVRGYVEEG-------MITEAG---------TLFWQMP----------- 33
MPE+++VSW ++ G G MI E G TL +P
Sbjct: 199 MPEKDLVSWNTIIAGNARNGLYEETLRMIREMGGANLKPDSFTLSSVLPLIAENVDISRG 258
Query: 34 ------------EKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQD 81
+ ++ + ++ + + +R+ D+ R+F ++ E+D ++ +++ G Q+
Sbjct: 259 KEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERDGISWNSIIAGCVQN 318
Query: 82 GRVDEGREIFDEM----PKKNVISWTTMISGYVNNNRIDVARKLFEVMP----EKNEVSW 133
G DEG F +M K S+++++ + + + ++L + ++N
Sbjct: 319 GLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIA 378
Query: 134 TAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDA 193
++++ Y +CG I+ A ++F M ++ +V+ +MI+G +G+ A
Sbjct: 379 SSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPDA------------- 425
Query: 194 TWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQL 253
I+LF M+ EG++ N + ++VL+ C+ +D + +
Sbjct: 426 ------------------IELFEQMETEGIKPNHVAFMAVLTACSHGGLVDEAWKYFNSM 467
Query: 254 VR 255
R
Sbjct: 468 TR 469
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 50/101 (49%), Gaps = 1/101 (0%)
Query: 239 SLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNS 298
S+ S +Q+HAQ+++ Q + S+L+++Y L +F+ + W S
Sbjct: 18 SIKSRSQAQQLHAQVLKFQ-ASSLCNLSLLLSIYSHINLLHDSLRLFNTIHFPPALAWKS 76
Query: 299 IISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACS 339
+I Y +GL +SL F M +SG+ PD VL +C+
Sbjct: 77 VIRCYTSHGLPHQSLGSFIGMLASGLYPDHNVFPSVLKSCA 117
>gi|296083798|emb|CBI24015.3| unnamed protein product [Vitis vinifera]
Length = 569
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 199/428 (46%), Positives = 274/428 (64%), Gaps = 7/428 (1%)
Query: 177 VQKARVVFDQM--REKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVL 234
+++AR VFD M R+++ +W+ MI Y + E LF M+ E V ++ S+L
Sbjct: 145 LEQARRVFDNMPQRDRNSVSWNAMIAAYVQSNRLHEAFALFDRMRLENVVLDKFVAASML 204
Query: 235 SVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIV 294
S C L +L+ G+ +H + + ++D +A+ +I MY KCG L K +F+ K I
Sbjct: 205 SACTGLGALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKCGCLEKASEVFNELPQKGIS 264
Query: 295 MWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESM 354
WN +I G A +G GE ++++F EM V PD +T V VLSAC+++G V+EG+ F+ M
Sbjct: 265 SWNCMIGGLAMHGKGEAAIELFKEMEREMVAPDGITFVNVLSACAHSGLVEEGKHYFQYM 324
Query: 355 KSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDL 414
++P EH+ CMVDLLGRAG +E+A KLI MP PDA + G+L+GACR H +L
Sbjct: 325 TEVLGLKPGMEHFGCMVDLLGRAGLLEEARKLINEMPVNPDAGVLGALVGACRIHGNTEL 384
Query: 415 AEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEK 474
E KK+++LEP N+G Y+LL+N+YAS GR+ DVA++RK M R V K PG S IE E
Sbjct: 385 GEQIGKKVIELEPHNSGRYVLLANLYASAGRWEDVAKVRKLMNDRGVKKAPGFSMIESES 444
Query: 475 KVHMFT--GRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYH 532
V F GR +HP+ I L++I +R GY PD+ VLHD+DEEEK + L YH
Sbjct: 445 GVDEFIAGGR---AHPQAKEIYAKLDEILETIRSIGYVPDTDGVLHDIDEEEKENPLYYH 501
Query: 533 SEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDG 592
SEKLA+A+GL+K G +R+ KNLR+C DCH A KLISKV REII+RD NRFHHF+ G
Sbjct: 502 SEKLAIAFGLLKTKPGETLRISKNLRICRDCHQASKLISKVYDREIIIRDRNRFHHFRMG 561
Query: 593 LCSCRDYW 600
CSC+DYW
Sbjct: 562 GCSCKDYW 569
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 94/415 (22%), Positives = 172/415 (41%), Gaps = 98/415 (23%)
Query: 22 ITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQD 81
I+++G L WQ+ + ++ ML + ++ F P ++ C D
Sbjct: 64 ISKSGYLRWQLARNCIFMYSRMLHKSVSPNK-------FTYPP---------LIRACCID 107
Query: 82 GRVDEGREIFDEMPK----KNVISWTTMISGYVNNNRIDVARKLFEVMPEK--NEVSWTA 135
++EG++I + K + S +I YVN ++ AR++F+ MP++ N VSW A
Sbjct: 108 YAIEEGKQIHAHVLKFGFGADGFSLNNLIHMYVNFQSLEQARRVFDNMPQRDRNSVSWNA 167
Query: 136 MLMGYTQCGRIQDAWELFKAMPMKSVVASN-------SMILGLG---------------- 172
M+ Y Q R+ +A+ LF M +++VV S GLG
Sbjct: 168 MIAAYVQSNRLHEAFALFDRMRLENVVLDKFVAASMLSACTGLGALEQGKWIHGYIEKSG 227
Query: 173 ----------------QNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFT 216
+ G ++KA VF+++ +K ++W+ MI G I+LF
Sbjct: 228 IELDSKLATTVIDMYCKCGCLEKASEVFNELPQKGISSWNCMIGGLAMHGKGEAAIELFK 287
Query: 217 LMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCG 276
M++E V + + ++VLS CA ++ G+ Y + + +K G
Sbjct: 288 EMEREMVAPDGITFVNVLSACAHSGLVEEGKH--------------YFQYMTEVLGLKPG 333
Query: 277 ELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLS 336
+ + ++ + GL E++ K+ +EM V PD L ++
Sbjct: 334 ----------------MEHFGCMVDLLGRAGLLEEARKLINEM---PVNPDAGVLGALVG 374
Query: 337 ACSYTGKVKEGREIFESMKSKYLVEP-KTEHYACMVDLLGRAGQVEDAMKLIEAM 390
AC G + G +I + + +EP + Y + +L AG+ ED K+ + M
Sbjct: 375 ACRIHGNTELGEQIGKKVIE---LEPHNSGRYVLLANLYASAGRWEDVAKVRKLM 426
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 107/223 (47%), Gaps = 7/223 (3%)
Query: 212 IDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITM 271
I +++ M + V N + ++ C +++ G+Q+HA +++ F D + + LI M
Sbjct: 79 IFMYSRMLHKSVSPNKFTYPPLIRACCIDYAIEEGKQIHAHVLKFGFGADGFSLNNLIHM 138
Query: 272 YIKCGELVKGKLIFDNFASKD--IVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDV 329
Y+ L + + +FDN +D V WN++I+ Y Q ++ +F M V+ D
Sbjct: 139 YVNFQSLEQARRVFDNMPQRDRNSVSWNAMIAAYVQSNRLHEAFALFDRMRLENVVLDKF 198
Query: 330 TLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEA 389
+LSAC+ G +++G+ I ++ K +E ++ ++D+ + G +E A ++
Sbjct: 199 VAASMLSACTGLGALEQGKWIHGYIE-KSGIELDSKLATTVIDMYCKCGCLEKASEVFNE 257
Query: 390 MPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGP 432
+P + W ++G H K E A + ++E + P
Sbjct: 258 LP-QKGISSWNCMIGGLAMHGK---GEAAIELFKEMEREMVAP 296
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 103/229 (44%), Gaps = 41/229 (17%)
Query: 1 MPER--NVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVV----------SWTVMLG--- 45
MP+R N VSW AM+ YV+ + EA LF +M +NVV S LG
Sbjct: 155 MPQRDRNSVSWNAMIAAYVQSNRLHEAFALFDRMRLENVVLDKFVAASMLSACTGLGALE 214
Query: 46 ------GFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNV 99
G+I S I E D T ++ YC+ G +++ E+F+E+P+K +
Sbjct: 215 QGKWIHGYIEKSGI-----------ELDSKLATTVIDMYCKCGCLEKASEVFNELPQKGI 263
Query: 100 ISWTTMISGYVNNNRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKA 155
SW MI G + + + A +LF+ M + + +++ +L G +++ F+
Sbjct: 264 SSWNCMIGGLAMHGKGEAAIELFKEMEREMVAPDGITFVNVLSACAHSGLVEEGKHYFQY 323
Query: 156 MP-----MKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMI 199
M + M+ LG+ G +++AR + ++M DA G +
Sbjct: 324 MTEVLGLKPGMEHFGCMVDLLGRAGLLEEARKLINEMPVNPDAGVLGAL 372
>gi|297743264|emb|CBI36131.3| unnamed protein product [Vitis vinifera]
Length = 550
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 186/427 (43%), Positives = 281/427 (65%), Gaps = 5/427 (1%)
Query: 177 VQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSV 236
+ AR++FD++ + + W+ +I+ Y G + L+ M G+ + + VL
Sbjct: 126 LSSARLLFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKA 185
Query: 237 CASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKD---I 293
CA+L++++HGR++H +V+ ++ DV+V + LI MY KCG + + +FD +D +
Sbjct: 186 CAALSAIEHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLV 245
Query: 294 VMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFES 353
V WN++I+GYA +G ++L +F EM + PD +T VGVLSACS+ G ++EG FE+
Sbjct: 246 VSWNAMITGYAMHGHATEALDLFEEM-NRVAKPDHITFVGVLSACSHGGLLEEGWMFFET 304
Query: 354 MKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLD 413
M Y ++P +HY CMVDLLG +G++++A LI M PD+ +WG+LL +C+ H ++
Sbjct: 305 MIRDYKIDPTVQHYTCMVDLLGHSGRLDEAYNLIMQMKVLPDSGVWGALLNSCKIHANVE 364
Query: 414 LAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVE 473
L E+A ++L++LEP +AG Y++LSNIYA G++ VA+LRK M R + K CSWIEV+
Sbjct: 365 LGEIALERLIELEPDDAGNYVILSNIYAQAGKWEGVAKLRKLMTDRRLKKSIACSWIEVK 424
Query: 474 KKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHS 533
KVH F D SHP I LE++GGL++EAGY P + V HDV+++EK + + HS
Sbjct: 425 NKVHAFLSGD-TSHPLSDEIYSELERVGGLMKEAGYSPSTGSVFHDVEDDEKANMVCSHS 483
Query: 534 EKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGL 593
E+LA+A+GL+ P G + + KNLR+C DCH AIK ISK+ REI +RD NR+HHFKDG+
Sbjct: 484 ERLAIAFGLISTPPGTRLLITKNLRICEDCHVAIKFISKITEREITVRDVNRYHHFKDGV 543
Query: 594 CSCRDYW 600
CSC DYW
Sbjct: 544 CSCGDYW 550
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 100/191 (52%), Gaps = 13/191 (6%)
Query: 226 NFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIF 285
+ + S+L C + ++ G+Q+HAQ+ F D +A+ L+ +Y C L +L+F
Sbjct: 74 TYSNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSSARLLF 133
Query: 286 DNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVK 345
D +I +WN +I GYA G E +++++++MF G++PD+ T VL AC+ ++
Sbjct: 134 DRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALSAIE 193
Query: 346 EGREIFESMKSKYLVEPKTEH----YACMVDLLGRAGQVEDAMKLIEAMPFEPDAII--- 398
GREI E ++V+ E A ++D+ + G V A ++ + + DA++
Sbjct: 194 HGREIHE-----HVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVR-DAVLVVS 247
Query: 399 WGSLLGACRTH 409
W +++ H
Sbjct: 248 WNAMITGYAMH 258
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 101/220 (45%), Gaps = 20/220 (9%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVV----SWTVMLGGFIRDSRIDDA 56
+P+ N+ W ++RGY G A L++QM + +V ++ +L S I+
Sbjct: 136 IPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALSAIEHG 195
Query: 57 RRLFDMMP----EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKN---VISWTTMISGY 109
R + + + EKDV ++ Y + G V RE+FD++ ++ V+SW MI+GY
Sbjct: 196 REIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLVVSWNAMITGY 255
Query: 110 VNNNRIDVARKLFEVM---PEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPM-----KSV 161
+ A LFE M + + +++ +L + G +++ W F+ M +V
Sbjct: 256 AMHGHATEALDLFEEMNRVAKPDHITFVGVLSACSHGGLLEEGWMFFETMIRDYKIDPTV 315
Query: 162 VASNSMILGLGQNGEVQKARVVFDQMRE-KDDATWSGMIK 200
M+ LG +G + +A + QM+ D W ++
Sbjct: 316 QHYTCMVDLLGHSGRLDEAYNLIMQMKVLPDSGVWGALLN 355
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 122/293 (41%), Gaps = 36/293 (12%)
Query: 67 DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVM- 125
D V T +V YC + R +FD +PK N+ W +I GY N + A +L+ M
Sbjct: 109 DTVIATKLVNLYCVCDSLSSARLLFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMF 168
Query: 126 -----PEKNEVSW---TAMLMGYTQCGR------IQDAWELFKAMPMKSVVASNSMILGL 171
P+ + + + GR +Q WE K V ++I
Sbjct: 169 DYGLVPDNFTFPFVLKACAALSAIEHGREIHEHVVQTGWE-------KDVFVGAALIDMY 221
Query: 172 GQNGEVQKARVVFDQMREKDD---ATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFP 228
+ G V AR VFD++ +D +W+ MI Y G+ E +DLF M + + +
Sbjct: 222 AKCGCVGSAREVFDKILVRDAVLVVSWNAMITGYAMHGHATEALDLFEEMNRVA-KPDHI 280
Query: 229 SLISVLSVCASLASLDHGRQVHAQLVR-CQFDVDVYVASVLITMYIKCGELVKG-KLIFD 286
+ + VLS C+ L+ G ++R + D V + ++ + G L + LI
Sbjct: 281 TFVGVLSACSHGGLLEEGWMFFETMIRDYKIDPTVQHYTCMVDLLGHSGRLDEAYNLIMQ 340
Query: 287 NFASKDIVMWNSIISG---YAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLS 336
D +W ++++ +A LGE +L+ E+ PDD +LS
Sbjct: 341 MKVLPDSGVWGALLNSCKIHANVELGEIALERLIEL-----EPDDAGNYVILS 388
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 36/168 (21%), Positives = 80/168 (47%), Gaps = 14/168 (8%)
Query: 53 IDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVI----SWTTMISG 108
+ AR LFD +P+ ++ ++ GY +G + +++ +M ++ ++ ++
Sbjct: 126 LSSARLLFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKA 185
Query: 109 YVNNNRIDVARKLFEVMP----EKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKS---V 161
+ I+ R++ E + EK+ A++ Y +CG + A E+F + ++ V
Sbjct: 186 CAALSAIEHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLV 245
Query: 162 VASNSMILGLGQNGEVQKARVVFDQMR---EKDDATWSGMIKVYERKG 206
V+ N+MI G +G +A +F++M + D T+ G++ G
Sbjct: 246 VSWNAMITGYAMHGHATEALDLFEEMNRVAKPDHITFVGVLSACSHGG 293
>gi|224119910|ref|XP_002318193.1| predicted protein [Populus trichocarpa]
gi|222858866|gb|EEE96413.1| predicted protein [Populus trichocarpa]
Length = 533
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 204/534 (38%), Positives = 321/534 (60%), Gaps = 13/534 (2%)
Query: 78 YCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEK-----NEVS 132
Y + G + R+IFDEM K+++ WT MI+ Y + + A LF+ M ++ + ++
Sbjct: 2 YAKCGLFVDCRKIFDEMSTKDLVCWTAMITAYEQAEKPEEALILFKKMQQEEGLLADSIA 61
Query: 133 WTAMLMGYTQCGRIQDAWEL----FKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMR 188
++ Q G +++A + F+ ++ + NS++ + G +KAR+VFD M
Sbjct: 62 VVSVASAVGQLGDVKNAHTVHGYAFRKSLIEELCVGNSILAMHTKCGNTEKARLVFDMMM 121
Query: 189 EKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQ 248
E+D +W+ M+ Y + G E + LF M+ + + + ++S CA L GR+
Sbjct: 122 ERDVISWNSMLSGYTQNGQATEALLLFDEMRDSDCQPTPVTALIMVSACAYLGFRHLGRK 181
Query: 249 VHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNF--ASKDIVMWNSIISGYAQY 306
H +V + ++D +++ L+ MY KCG+L K +F+ ++ WN +ISGY +
Sbjct: 182 FHDFIVDSRMEIDTNLSNALMDMYAKCGDLEKAVDLFNGIPPTERNAGSWNVLISGYGMH 241
Query: 307 GLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEH 366
G G+++L++F M GV P+ T +LSACS+ G + EGR+ F MK + V + +H
Sbjct: 242 GHGKEALELFSRMQEEGVEPNHFTFTSILSACSHAGLIDEGRKCFAEMK-RLSVTLEDKH 300
Query: 367 YACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLE 426
+AC+VD+LGRAG +++A LI+ MP P +WG+LL AC+ H ++L + AA LLQLE
Sbjct: 301 HACVVDMLGRAGLLQEAFDLIKEMPSPPSDGVWGALLLACKIHGNMELGKTAASNLLQLE 360
Query: 427 PKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVS 486
P + G Y+L+SNIYA+ ++ +V +LR++M+ + + KP S IE K + F D
Sbjct: 361 PNHTGYYVLMSNIYAASNKWKEVWKLRQDMKNKGLKKPAAFSMIEYGKDILGFHTAD-QE 419
Query: 487 HPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLP 546
+P + + +E + ++ AGY PD S LHDV+EE+K L YHSEKLAVA+G++K+
Sbjct: 420 NPYRHEVYKKMESLAIEMKMAGYVPDLSCALHDVEEEDKERMLNYHSEKLAVAFGVLKID 479
Query: 547 EGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
G+ IRV KNLRVC DCHSA K IS + R+II+RDANRFHHF+ G CSC+DYW
Sbjct: 480 PGMVIRVTKNLRVCNDCHSAFKYISHIYQRKIIVRDANRFHHFQGGTCSCKDYW 533
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 149/299 (49%), Gaps = 23/299 (7%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKN--------VVSWTVMLG--GFIRD 50
M +++V WTAM+ Y + EA LF +M ++ VVS +G G +++
Sbjct: 18 MSTKDLVCWTAMITAYEQAEKPEEALILFKKMQQEEGLLADSIAVVSVASAVGQLGDVKN 77
Query: 51 SRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYV 110
+ + E+ V + + + + + G ++ R +FD M +++VISW +M+SGY
Sbjct: 78 AHTVHGYAFRKSLIEELCVGNSILAM-HTKCGNTEKARLVFDMMMERDVISWNSMLSGYT 136
Query: 111 NNNRIDVARKLFEVMPEKN--EVSWTAMLM-------GYTQCGRIQDAWELFKAMPMKSV 161
N + A LF+ M + + TA++M G+ GR + + M + +
Sbjct: 137 QNGQATEALLLFDEMRDSDCQPTPVTALIMVSACAYLGFRHLGRKFHDFIVDSRMEIDTN 196
Query: 162 VASNSMILGLGQNGEVQKARVVFDQM--REKDDATWSGMIKVYERKGYELEVIDLFTLMQ 219
+ SN+++ + G+++KA +F+ + E++ +W+ +I Y G+ E ++LF+ MQ
Sbjct: 197 L-SNALMDMYAKCGDLEKAVDLFNGIPPTERNAGSWNVLISGYGMHGHGKEALELFSRMQ 255
Query: 220 KEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGEL 278
+EGV N + S+LS C+ +D GR+ A++ R ++ + ++ M + G L
Sbjct: 256 EEGVEPNHFTFTSILSACSHAGLIDEGRKCFAEMKRLSVTLEDKHHACVVDMLGRAGLL 314
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 116/255 (45%), Gaps = 26/255 (10%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV----VSWTVMLGGFIRDSRIDDA 56
M ER+V+SW +M+ GY + G TEA LF +M + + V+ +M+
Sbjct: 120 MMERDVISWNSMLSGYTQNGQATEALLLFDEMRDSDCQPTPVTALIMVSACAYLGFRHLG 179
Query: 57 RRLFDMMPEKDVVAQTNMVLG----YCQDGRVDEGREIFDEMP--KKNVISWTTMISGYV 110
R+ D + + + TN+ Y + G +++ ++F+ +P ++N SW +ISGY
Sbjct: 180 RKFHDFIVDSRMEIDTNLSNALMDMYAKCGDLEKAVDLFNGIPPTERNAGSWNVLISGYG 239
Query: 111 NNNRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNS 166
+ A +LF M E+ N ++T++L + G I + + F M SV +
Sbjct: 240 MHGHGKEALELFSRMQEEGVEPNHFTFTSILSACSHAGLIDEGRKCFAEMKRLSVTLEDK 299
Query: 167 ----MILGLGQNGEVQKARVVFDQMRE----KDDATWSGMIKVYERKG-YELEVIDLFTL 217
++ LG+ G +Q+A FD ++E D W ++ + G EL L
Sbjct: 300 HHACVVDMLGRAGLLQEA---FDLIKEMPSPPSDGVWGALLLACKIHGNMELGKTAASNL 356
Query: 218 MQKEGVRVNFPSLIS 232
+Q E + L+S
Sbjct: 357 LQLEPNHTGYYVLMS 371
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 67/136 (49%), Gaps = 3/136 (2%)
Query: 271 MYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFS-SGVMPDDV 329
MY KCG V + IFD ++KD+V W ++I+ Y Q E++L +F +M G++ D +
Sbjct: 1 MYAKCGLFVDCRKIFDEMSTKDLVCWTAMITAYEQAEKPEEALILFKKMQQEEGLLADSI 60
Query: 330 TLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEA 389
+V V SA G VK + K L+E + + + + G E A +L+
Sbjct: 61 AVVSVASAVGQLGDVKNAHTVHGYAFRKSLIEELCVGNSILA-MHTKCGNTEKA-RLVFD 118
Query: 390 MPFEPDAIIWGSLLGA 405
M E D I W S+L
Sbjct: 119 MMMERDVISWNSMLSG 134
>gi|20197649|gb|AAM15176.1| putative selenium-binding protein [Arabidopsis thaliana]
Length = 472
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 192/428 (44%), Positives = 277/428 (64%), Gaps = 3/428 (0%)
Query: 175 GEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVL 234
G+V++A VF + +KD WS M+ Y + G I +F + K G++ N + S+L
Sbjct: 46 GKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSIL 105
Query: 235 SVCASL-ASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDI 293
+VCA+ AS+ G+Q H ++ + D + V+S L+TMY K G + + +F KD+
Sbjct: 106 NVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDL 165
Query: 294 VMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFES 353
V WNS+ISGYAQ+G K+L VF EM V D VT +GV +AC++ G V+EG + F+
Sbjct: 166 VSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDI 225
Query: 354 MKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLD 413
M + P EH +CMVDL RAGQ+E AMK+IE MP + IW ++L ACR H K +
Sbjct: 226 MVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTE 285
Query: 414 LAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVE 473
L +AA+K++ ++P+++ Y+LLSN+YA G + + A++RK M +RNV K PG SWIEV+
Sbjct: 286 LGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVK 345
Query: 474 KKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHS 533
K + F D SHP I LE + L++ GY PD+S+VL D+D+E K L HS
Sbjct: 346 NKTYSFLAGD-RSHPLKDQIYMKLEDLSTRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHS 404
Query: 534 EKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHF-KDG 592
E+LA+A+GL+ P+G P+ ++KNLRVCGDCH IKLI+K+ REI++RD+NRFHHF DG
Sbjct: 405 ERLAIAFGLIATPKGSPLLIIKNLRVCGDCHLVIKLIAKIEEREIVVRDSNRFHHFSSDG 464
Query: 593 LCSCRDYW 600
+CSC D+W
Sbjct: 465 VCSCGDFW 472
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 121/249 (48%), Gaps = 11/249 (4%)
Query: 65 EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEV 124
E+ T ++ Y + G+V+E ++F + K++++W+ M++GY + A K+F
Sbjct: 29 ERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGE 88
Query: 125 MPE----KNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKS-----VVASNSMILGLGQNG 175
+ + NE +++++L + F +KS + S++++ + G
Sbjct: 89 LTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKG 148
Query: 176 EVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLS 235
++ A VF + REKD +W+ MI Y + G ++ +D+F M+K V+++ + I V +
Sbjct: 149 NIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFA 208
Query: 236 VCASLASLDHGRQVHAQLVR-CQFDVDVYVASVLITMYIKCGELVKGKLIFDNFAS-KDI 293
C ++ G + +VR C+ S ++ +Y + G+L K + +N +
Sbjct: 209 ACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGS 268
Query: 294 VMWNSIISG 302
+W +I++
Sbjct: 269 TIWRTILAA 277
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 87/163 (53%), Gaps = 3/163 (1%)
Query: 248 QVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYG 307
+VHAQ+V+ ++ V + L+ Y+K G++ + +F KDIV W+++++GYAQ G
Sbjct: 18 EVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTG 77
Query: 308 LGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYT-GKVKEGREIFESMKSKYLVEPKTEH 366
E ++K+F E+ G+ P++ T +L+ C+ T + +G++ F K ++
Sbjct: 78 ETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQ-FHGFAIKSRLDSSLCV 136
Query: 367 YACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTH 409
+ ++ + + G +E A ++ + E D + W S++ H
Sbjct: 137 SSALLTMYAKKGNIESAEEVFKRQR-EKDLVSWNSMISGYAQH 178
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 105/226 (46%), Gaps = 26/226 (11%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDM 62
ER+ TA++ YV+ G + EA +F + +K++V+W+ ML G+ + + A ++F
Sbjct: 29 ERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGE 88
Query: 63 MPEK-------------DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGY 109
+ + +V A TN +G G+ G I + +S + +++ Y
Sbjct: 89 LTKGGIKPNEFTFSSILNVCAATNASMG---QGKQFHGFAIKSRLDSSLCVS-SALLTMY 144
Query: 110 VNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMIL 169
I+ A ++F+ EK+ VSW +M+ GY Q G+ A ++FK M + V +
Sbjct: 145 AKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFI 204
Query: 170 GL----GQNGEVQKARVVFDQM-REKDDATW----SGMIKVYERKG 206
G+ G V++ FD M R+ A S M+ +Y R G
Sbjct: 205 GVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAG 250
>gi|413952592|gb|AFW85241.1| hypothetical protein ZEAMMB73_384525 [Zea mays]
Length = 683
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 205/518 (39%), Positives = 302/518 (58%), Gaps = 22/518 (4%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDA---- 56
MP RN SW M+ G+ G + +A +F MP+K+ S + M+ GFIR+ R+ +A
Sbjct: 158 MPHRNASSWNTMITGFFAVGQMRKALNVFAAMPDKDSASLSAMVSGFIRNGRLHEADDLL 217
Query: 57 -RRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPK--------------KNVIS 101
+RL M +K V A ++ Y Q GRV + R +F +PK +NV+S
Sbjct: 218 TKRLTVMDMDKAVGAFNTLIAAYGQTGRVTDARRLFSMIPKTQNQHKGHKRMVFERNVVS 277
Query: 102 WTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSV 161
W +M+ Y+ + AR LF+ MP K+ VSW M+ GYTQ +++A +LF +P
Sbjct: 278 WNSMMMCYIRTGDVCSARALFDEMPHKDLVSWNTMIAGYTQASEMEEAEKLFWEVPDPDA 337
Query: 162 VASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKE 221
V N MI G Q G+V+ AR FD+M E+ TW+ MI YE+ I LF M +
Sbjct: 338 VTWNLMIRGFTQKGDVEHARGFFDRMPERSTITWNTMISGYEQNEDYDSTIKLFQRMLEV 397
Query: 222 GVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKG 281
G R + +L SVL+ CASLA L G Q+H QL+ F D + L+TMY +CGEL+
Sbjct: 398 GERPDHHTLSSVLAACASLAMLRLGAQLH-QLIEKSFLPDTATNNALMTMYSRCGELISA 456
Query: 282 KLIFDNFAS-KDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSY 340
K IF + + +DIV WN++I GY Q G ++L++F EM S+ VMP +T + +LSAC
Sbjct: 457 KAIFGHMHTQRDIVSWNALIGGYEQQGNATEALRLFEEMRSAKVMPTHITFISLLSACGN 516
Query: 341 TGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWG 400
G V EGR +F +M Y + EHYA +V+L+GR GQ+EDA++LI++MP PD +WG
Sbjct: 517 AGLVSEGRVVFHTMVHDYGLAASVEHYAALVNLIGRHGQLEDALELIKSMPIAPDRAVWG 576
Query: 401 SLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRN 460
+ LGAC LAE+AA L +++P ++ PY+L+ N++A +GR+ + +R++M +
Sbjct: 577 AFLGACTAKKNEPLAEMAANALSKIDPDSSAPYVLMHNLHAHEGRWGSASLVREDMERLG 636
Query: 461 VIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLE 498
+ K PG SWI++ KVH+F D SHP I +LE
Sbjct: 637 IHKHPGYSWIDLHDKVHVFISGD-TSHPLTHEIFSVLE 673
Score = 188 bits (477), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 114/426 (26%), Positives = 213/426 (50%), Gaps = 32/426 (7%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDD---AR 57
+P R+VV+W +++ + A F MP ++++SW +L + R + +D AR
Sbjct: 62 LPARSVVTWNSLLAALSRGSDVRAARCFFDAMPVRDIISWNTLLSAYARSLQPNDLAAAR 121
Query: 58 RLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDV 117
RLF MP++D V+ + ++ Y + G ++E + +FDEMP +N SW TMI+G+ ++
Sbjct: 122 RLFYEMPQRDAVSWSTLLGAYTRRGLMEEAQRLFDEMPHRNASSWNTMITGFFAVGQMRK 181
Query: 118 ARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWEL----FKAMPM-KSVVASNSMILGLG 172
A +F MP+K+ S +AM+ G+ + GR+ +A +L M M K+V A N++I G
Sbjct: 182 ALNVFAAMPDKDSASLSAMVSGFIRNGRLHEADDLLTKRLTVMDMDKAVGAFNTLIAAYG 241
Query: 173 QNGEVQKARVVFDQMR--------------EKDDATWSGMIKVYERKGYELEVIDLFTLM 218
Q G V AR +F + E++ +W+ M+ Y R G LF M
Sbjct: 242 QTGRVTDARRLFSMIPKTQNQHKGHKRMVFERNVVSWNSMMMCYIRTGDVCSARALFDEM 301
Query: 219 QKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGEL 278
+ + V++ ++I+ + + + + +L D D +++I + + G++
Sbjct: 302 PHKDL-VSWNTMIAGYTQASEMEEAE-------KLFWEVPDPDAVTWNLMIRGFTQKGDV 353
Query: 279 VKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSAC 338
+ FD + + WN++ISGY Q + ++K+F M G PD TL VL+AC
Sbjct: 354 EHARGFFDRMPERSTITWNTMISGYEQNEDYDSTIKLFQRMLEVGERPDHHTLSSVLAAC 413
Query: 339 SYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAII 398
+ ++ G ++ + ++ +L P T ++ + R G++ A + M + D +
Sbjct: 414 ASLAMLRLGAQLHQLIEKSFL--PDTATNNALMTMYSRCGELISAKAIFGHMHTQRDIVS 471
Query: 399 WGSLLG 404
W +L+G
Sbjct: 472 WNALIG 477
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 120/417 (28%), Positives = 195/417 (46%), Gaps = 40/417 (9%)
Query: 44 LGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWT 103
L G +R R ARRLFD +P + VV +++ + V R FD MP +++ISW
Sbjct: 43 LVGLLRRGRFSAARRLFDALPARSVVTWNSLLAALSRGSDVRAARCFFDAMPVRDIISWN 102
Query: 104 TMISGYVNN---NRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKS 160
T++S Y + N + AR+LF MP+++ VSW+ +L YT+ G +++A LF MP ++
Sbjct: 103 TLLSAYARSLQPNDLAAARRLFYEMPQRDAVSWSTLLGAYTRRGLMEEAQRLFDEMPHRN 162
Query: 161 VVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDL----FT 216
+ N+MI G G+++KA VF M +KD A+ S M+ + R G E DL T
Sbjct: 163 ASSWNTMITGFFAVGQMRKALNVFAAMPDKDSASLSAMVSGFIRNGRLHEADDLLTKRLT 222
Query: 217 LMQKEGVRVNFPSLISVLSVCASLAS-------LDHGRQVHAQLVRCQFDVDVYVASVLI 269
+M + F +LI+ + + + H R F+ +V + ++
Sbjct: 223 VMDMDKAVGAFNTLIAAYGQTGRVTDARRLFSMIPKTQNQHKGHKRMVFERNVVSWNSMM 282
Query: 270 TMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDV 329
YI+ G++ + +FD KD+V WN++I+GY Q E++ K+F E+ PD V
Sbjct: 283 MCYIRTGDVCSARALFDEMPHKDLVSWNTMIAGYTQASEMEEAEKLFWEVPD----PDAV 338
Query: 330 TLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKT--------EHYACMVDLLGRAGQVE 381
T ++ + G V+ R F+ M + + T E Y + L R +V
Sbjct: 339 TWNLMIRGFTQKGDVEHARGFFDRMPERSTITWNTMISGYEQNEDYDSTIKLFQRMLEVG 398
Query: 382 DAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSN 438
+ PD S+L AC + L L +L QL K+ P +N
Sbjct: 399 E----------RPDHHTLSSVLAACASLAMLRL----GAQLHQLIEKSFLPDTATNN 441
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/254 (20%), Positives = 106/254 (41%), Gaps = 26/254 (10%)
Query: 165 NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVR 224
N ++GL + G AR +FD + + TW+ ++ R F M +
Sbjct: 40 NRSLVGLLRRGRFSAARRLFDALPARSVVTWNSLLAALSRGSDVRAARCFFDAMPVRDI- 98
Query: 225 VNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLI 284
+++ +L+S + L R++ ++ + D S L+ Y + G + + + +
Sbjct: 99 ISWNTLLSAYARSLQPNDLAAARRLFYEMPQ----RDAVSWSTLLGAYTRRGLMEEAQRL 154
Query: 285 FDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMP--DDVTLVGVLSACSYTG 342
FD ++ WN++I+G+ G K+L VF MP D +L ++S G
Sbjct: 155 FDEMPHRNASSWNTMITGFFAVGQMRKALNVF------AAMPDKDSASLSAMVSGFIRNG 208
Query: 343 KVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMP----------- 391
++ E ++ + ++ + ++ G+ G+V DA +L +P
Sbjct: 209 RLHEADDLLTKRLTVMDMDKAVGAFNTLIAAYGQTGRVTDARRLFSMIPKTQNQHKGHKR 268
Query: 392 --FEPDAIIWGSLL 403
FE + + W S++
Sbjct: 269 MVFERNVVSWNSMM 282
>gi|297798624|ref|XP_002867196.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313032|gb|EFH43455.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 997
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 215/620 (34%), Positives = 353/620 (56%), Gaps = 25/620 (4%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM------PEKNVVSWTVMLGGFIRDSRID 54
M ER+++SW +++ G + + EA LF Q+ P+ ++ +V+ +
Sbjct: 383 MSERDLISWNSVIAGIAQSDLEVEAVCLFMQLLRCGLKPDHYTMT-SVLKAASSLPEGLS 441
Query: 55 DARRLFDMMPEKDVVA----QTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYV 110
++++ + + VA T ++ Y ++ + E +F ++++W M+SGY
Sbjct: 442 LSKQIHVHAIKTNNVADSFVSTALIDAYSRNRCMKEAEVLFGR-NNFDLVAWNAMMSGYT 500
Query: 111 NNNRIDVARKLFEVMPEKNEVS----------WTAMLMGYTQCGRIQDAWELFKAMPMKS 160
++ +LF +M ++ E S L Q G+ A+ + +
Sbjct: 501 QSHDGHKTLELFALMHKQGERSDDFTLATVLKTCGFLFAINQ-GKQVHAYAIKSGYDLDL 559
Query: 161 VVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQK 220
V+S + + + + G++ A+ FD + DD W+ +I G E + +F+ M+
Sbjct: 560 WVSSGILDMYV-KCGDMSAAQFAFDSIPVPDDVAWTTLISGCIENGEEERALHVFSQMRL 618
Query: 221 EGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVK 280
GV + ++ ++ + L +L+ GRQ+HA ++ D +V + L+ MY KCG +
Sbjct: 619 MGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTSDPFVGTSLVDMYAKCGSIDD 678
Query: 281 GKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSY 340
+F +I WN+++ G AQ+G G+++L++F +M S G+ PD VT +GVLSACS+
Sbjct: 679 AYCLFKRIEMMNITAWNAMLVGLAQHGEGKEALQLFKQMESLGIKPDKVTFIGVLSACSH 738
Query: 341 TGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWG 400
+G V E + SM Y ++P+ EHY+C+ D LGRAG V++A LI++M E A ++
Sbjct: 739 SGLVSEAYKYIRSMHRDYGIKPEIEHYSCLADALGRAGLVKEAENLIDSMSMEASASMYR 798
Query: 401 SLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRN 460
+LL ACR + + A KLL+LEP ++ Y+LLSN+YA+ ++ ++ R M+
Sbjct: 799 TLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHK 858
Query: 461 VIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDV 520
V K PG SWIEV+ K+H+F D S+P+ +I + ++ + +++ GY P++ F L DV
Sbjct: 859 VKKDPGFSWIEVKNKIHLFVVDD-RSNPQTELIYKKVKDMIRDIKQEGYVPETDFTLVDV 917
Query: 521 DEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIIL 580
+EEEK +L YHSEKLAVA+GL+ P PIRV+KNLRVCGDCH+A+K ISKV REI+L
Sbjct: 918 EEEEKERALYYHSEKLAVAFGLLSTPPSTPIRVIKNLRVCGDCHNAMKYISKVYDREIVL 977
Query: 581 RDANRFHHFKDGLCSCRDYW 600
RDANRFH FKDG+CSC DYW
Sbjct: 978 RDANRFHRFKDGICSCGDYW 997
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 94/360 (26%), Positives = 169/360 (46%), Gaps = 26/360 (7%)
Query: 2 PERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDS-----RIDDA 56
PER +V+ ++ Y + G +T A +F +MPE+++VSW +L + + S + +A
Sbjct: 79 PERFLVN--NLISMYSKCGSLTYARRVFDKMPERDLVSWNSILAAYAQSSEGVVENVKEA 136
Query: 57 RRLFDMMPEKDVVAQTNMVLG----YCQDGRVDEGREIFDEMPKKNVISWTTMISG---- 108
LF ++ +DVV + M L C E F K + ++G
Sbjct: 137 FLLFRIL-RQDVVYTSRMTLSPMLKLCLHSGYVCASESFHGYACKIGLDGDDFVAGALVN 195
Query: 109 -YVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSM 167
Y+ ++ R LFE MP ++ V W ML Y + G ++A +L A S + N +
Sbjct: 196 IYLKFGKVKEGRVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFH-TSGLHPNEI 254
Query: 168 ILGL--------GQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQ 219
L L + G+V+ D + + + ++ Y G ++ F M
Sbjct: 255 TLRLLSRISGDDSEAGQVKSFENGNDASAVSEIISRNKILSGYLHAGQYSALLKCFMDMV 314
Query: 220 KEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELV 279
+ + + + I VL+ L SL G+QVH ++ D+ + V++ LI MY K ++
Sbjct: 315 ESDLECDQVTFILVLATAVRLDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKIG 374
Query: 280 KGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACS 339
+ +F+N + +D++ WNS+I+G AQ L +++ +F ++ G+ PD T+ VL A S
Sbjct: 375 LARTVFNNMSERDLISWNSVIAGIAQSDLEVEAVCLFMQLLRCGLKPDHYTMTSVLKAAS 434
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 87/172 (50%), Gaps = 7/172 (4%)
Query: 239 SLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNS 298
S + L G+ HA+++ + + + ++ + LI+MY KCG L + +FD +D+V WNS
Sbjct: 58 STSDLMLGKCTHARILALEENPERFLVNNLISMYSKCGSLTYARRVFDKMPERDLVSWNS 117
Query: 299 IISGYAQYGLG-----EKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFES 353
I++ YAQ G +++ +F + V +TL +L C ++G V E F
Sbjct: 118 ILAAYAQSSEGVVENVKEAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVC-ASESFHG 176
Query: 354 MKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
K ++ +V++ + G+V++ L E MP+ D ++W +L A
Sbjct: 177 YACKIGLDGDDFVAGALVNIYLKFGKVKEGRVLFEEMPYR-DVVLWNLMLKA 227
>gi|22328607|ref|NP_193141.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635650|sp|O23266.3|PP308_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g14050, mitochondrial; Flags: Precursor
gi|332657965|gb|AEE83365.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 612
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 213/569 (37%), Positives = 329/569 (57%), Gaps = 46/569 (8%)
Query: 75 VLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGY------------------------- 109
V G C G ++FDEMP ++ I+W ++++
Sbjct: 47 VYGKC--GAASHALQVFDEMPHRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPD 104
Query: 110 -----------VNNNRIDVARKL---FEVMPEKN-EVSWTAMLMGYTQCGRIQDAWELFK 154
N ID R++ F V N EV ++++ Y +CG + A +F
Sbjct: 105 DFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFD 164
Query: 155 AMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDL 214
++ +K+ ++ +M+ G ++G ++A +F + K+ +W+ +I + + G LE +
Sbjct: 165 SIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSV 224
Query: 215 FTLMQKEGVRVNFP-SLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYI 273
FT M++E V + P L S++ CA+LA+ GRQVH ++ FD V++++ LI MY
Sbjct: 225 FTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYA 284
Query: 274 KCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVG 333
KC +++ K IF +D+V W S+I G AQ+G EK+L ++ +M S GV P++VT VG
Sbjct: 285 KCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVG 344
Query: 334 VLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFE 393
++ ACS+ G V++GRE+F+SM Y + P +HY C++DLLGR+G +++A LI MPF
Sbjct: 345 LIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFP 404
Query: 394 PDAIIWGSLLGACRTHMKLDLAEVAAKKLL-QLEPKNAGPYILLSNIYASQGRFHDVAEL 452
PD W +LL AC+ + + A L+ + K+ YILLSNIYAS + V+E
Sbjct: 405 PDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKLKDPSTYILLSNIYASASLWGKVSEA 464
Query: 453 RKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLR-EAGYCP 511
R+ + + V K PG S +EV K+ +F + SHP I R+L+K+ +R GY P
Sbjct: 465 RRKLGEMEVRKDPGHSSVEVRKETEVFYAGE-TSHPLKEDIFRLLKKLEEEMRIRNGYVP 523
Query: 512 DSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLIS 571
D+S++LHD+DE+EK L +HSE+ AVAYGL+K G PIR++KNLRVCGDCH +K IS
Sbjct: 524 DTSWILHDMDEQEKEKLLFWHSERSAVAYGLLKAVPGTPIRIVKNLRVCGDCHVVLKHIS 583
Query: 572 KVMGREIILRDANRFHHFKDGLCSCRDYW 600
++ REII+RDA R+HHFK G CSC D+W
Sbjct: 584 EITEREIIVRDATRYHHFKGGKCSCNDFW 612
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 91/436 (20%), Positives = 180/436 (41%), Gaps = 91/436 (20%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDS------------------ 51
+V Y + G + A +F +MP ++ ++W +L + +
Sbjct: 42 NTLVNVYGKCGAASHALQVFDEMPHRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGL 101
Query: 52 ------------------RIDDARRLFDMMP----EKDVVAQTNMVLGYCQDGRVDEGRE 89
ID R++ D V ++++V Y + G ++ +
Sbjct: 102 RPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKA 161
Query: 90 IFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDA 149
+FD + KN ISWT M+SGY + R + A +LF ++P KN SWTA++ G+ Q G+ +A
Sbjct: 162 VFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEA 221
Query: 150 WELFKAM---------PM-------------------------------KSVVASNSMIL 169
+ +F M P+ V SN++I
Sbjct: 222 FSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALID 281
Query: 170 GLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPS 229
+ +V A+ +F +MR +D +W+ +I + G + + L+ M GV+ N +
Sbjct: 282 MYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVT 341
Query: 230 LISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVA----SVLITMYIKCGELVKGK-LI 284
+ ++ C+ + ++ GR++ + + D + + + L+ + + G L + + LI
Sbjct: 342 FVGLIYACSHVGFVEKGRELFQSMTK---DYGIRPSLQHYTCLLDLLGRSGLLDEAENLI 398
Query: 285 FDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVT---LVGVLSACSYT 341
D W +++S + G G+ +++ + SS + D T L + ++ S
Sbjct: 399 HTMPFPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKLKDPSTYILLSNIYASASLW 458
Query: 342 GKVKEGREIFESMKSK 357
GKV E R M+ +
Sbjct: 459 GKVSEARRKLGEMEVR 474
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 100/195 (51%), Gaps = 9/195 (4%)
Query: 164 SNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVI-DLFTLMQKEG 222
+N+++ G+ G A VFD+M +D W+ ++ + + + ++ G
Sbjct: 41 ANTLVNVYGKCGAASHALQVFDEMPHRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSG 100
Query: 223 VRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGK 282
+R + +++ CA+L S+DHGRQVH + ++ D V S L+ MY KCG L K
Sbjct: 101 LRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAK 160
Query: 283 LIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMP--DDVTLVGVLSACSY 340
+FD+ K+ + W +++SGYA+ G E++L++F ++P + + ++S
Sbjct: 161 AVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFR------ILPVKNLYSWTALISGFVQ 214
Query: 341 TGKVKEGREIFESMK 355
+GK E +F M+
Sbjct: 215 SGKGLEAFSVFTEMR 229
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 115/253 (45%), Gaps = 50/253 (19%)
Query: 4 RNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMM 63
+N +SWTAMV GY + G EA LF +P KN+ SWT ++ GF++ + +A +F M
Sbjct: 169 KNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEM 228
Query: 64 PEKDVVAQTNMVL----GYCQD------GRVDEG-------------------------- 87
+ V +VL G C + GR G
Sbjct: 229 RRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSD 288
Query: 88 ----REIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVM----PEKNEVSWTAMLMG 139
++IF M ++V+SWT++I G + + + A L++ M + NEV++ ++
Sbjct: 289 VIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYA 348
Query: 140 YTQCGRIQDAWELFKAMPMK-----SVVASNSMILGLGQNGEVQKARVVFDQMR-EKDDA 193
+ G ++ ELF++M S+ ++ LG++G + +A + M D+
Sbjct: 349 CSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEP 408
Query: 194 TWSGMIKVYERKG 206
TW+ ++ +R+G
Sbjct: 409 TWAALLSACKRQG 421
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 107/237 (45%), Gaps = 8/237 (3%)
Query: 227 FPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFD 286
P + L +CA +L + +HA +V+ +A+ L+ +Y KCG +FD
Sbjct: 3 IPHYLHQLQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFD 62
Query: 287 NFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVM-PDDVTLVGVLSACSYTGKVK 345
+D + W S+++ Q L K+L VF + SS + PDD ++ AC+ G +
Sbjct: 63 EMPHRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSID 122
Query: 346 EGREIF-ESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLG 404
GR++ + S+Y + + + +VD+ + G + A + +++ + + I W +++
Sbjct: 123 HGRQVHCHFIVSEYANDEVVK--SSLVDMYAKCGLLNSAKAVFDSIRVK-NTISWTAMVS 179
Query: 405 ACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNV 461
+ K E A + L KN + L + + G+ + + MR+ V
Sbjct: 180 G---YAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERV 233
>gi|297824049|ref|XP_002879907.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325746|gb|EFH56166.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 565
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 215/594 (36%), Positives = 344/594 (57%), Gaps = 41/594 (6%)
Query: 16 YVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMV 75
Y + G + A L+ +M +KN +S +++ G++R + AR++FD MP++ + M+
Sbjct: 4 YSKLGDLPSAVALYERMRKKNFMSSNILINGYVRAGDLVSARKVFDEMPDRKLTTWNAMI 63
Query: 76 LGYCQDGRVDEGREIFDEMP----KKNVISWTTMISGYVNNNRIDVARKL----FEVMPE 127
G Q +EG +F EM + + ++ SG + + +++ + E
Sbjct: 64 AGLIQFEYNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYAIKYGLE 123
Query: 128 KNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQM 187
+ V +++ Y + G++QD + ++MP++++VA N++I+G QNG +
Sbjct: 124 LDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPET-------- 175
Query: 188 REKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGR 247
V+ L+ +M+ G R N + ++VLS C+ LA G+
Sbjct: 176 -----------------------VLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQ 212
Query: 248 QVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYG 307
Q+HA+ ++ V V S LI+MY KCG L F +D VMW+S+IS Y +G
Sbjct: 213 QIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHG 272
Query: 308 LGEKSLKVFHEMFSSGVMP-DDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEH 366
G++++K+F+ M M ++V + +L ACS++G +G E+F+ M KY +P +H
Sbjct: 273 QGDEAIKLFNSMAEQTEMEVNEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKH 332
Query: 367 YACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLE 426
Y C+VDLLGRAG ++ A +I++MP +PD +IW +LL AC H ++A+ K++L+++
Sbjct: 333 YTCVVDLLGRAGCLDQAEAIIKSMPIKPDPVIWKTLLSACNIHKNAEMAQKVFKEILEID 392
Query: 427 PKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVS 486
P ++ Y+LL+N++AS R+ DV+E+RK+MR +NV K G SW E + +VH F D S
Sbjct: 393 PNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVHQFKMGD-RS 451
Query: 487 HPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLP 546
+ I L+++ ++ GY PD++ VLHD+DEEEK L HSEKLAVA+ L+ LP
Sbjct: 452 QSKSKEIYSYLKELTLEMKLKGYKPDTASVLHDMDEEEKESDLVQHSEKLAVAFALMILP 511
Query: 547 EGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
EG PIR++KNLRVC DCH A K IS +M REI LRD +RFHHF +G CSC DYW
Sbjct: 512 EGAPIRIIKNLRVCSDCHVAFKYISVIMNREITLRDGSRFHHFINGKCSCGDYW 565
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 87/411 (21%), Positives = 175/411 (42%), Gaps = 59/411 (14%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
M ++N +S ++ GYV G + A +F +MP++ + +W M+ G I+ ++ LF
Sbjct: 20 MRKKNFMSSNILINGYVRAGDLVSARKVFDEMPDRKLTTWNAMIAGLIQFEYNEEGLSLF 79
Query: 61 DMMP---------------------------------------EKDVVAQTNMVLGYCQD 81
M E D+V +++ Y ++
Sbjct: 80 REMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYAIKYGLELDLVVNSSLAHMYMRN 139
Query: 82 GRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMP----EKNEVSWTAML 137
G++ +G + MP +N+++W T+I G N + L+++M N++++ +L
Sbjct: 140 GKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVL 199
Query: 138 MGYTQCGRI-------QDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREK 190
+ C + Q E K V +S+I + G + A F + ++
Sbjct: 200 ---SSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDE 256
Query: 191 DDATWSGMIKVYERKGYELEVIDLFTLMQKEG-VRVNFPSLISVLSVCASLASLDHGRQV 249
D+ WS MI Y G E I LF M ++ + VN + +++L C+ D G ++
Sbjct: 257 DEVMWSSMISAYGFHGQGDEAIKLFNSMAEQTEMEVNEVAFLNLLYACSHSGLKDKGLEL 316
Query: 250 HAQLV-RCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASK-DIVMWNSIISGYAQYG 307
+V + F + + ++ + + G L + + I + K D V+W +++S +
Sbjct: 317 FDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIKSMPIKPDPVIWKTLLSACNIHK 376
Query: 308 LGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKV-KEGREIFESMKSK 357
E + KVF E+ + P+D +L+ + K ++ E+ +SM+ K
Sbjct: 377 NAEMAQKVFKEILE--IDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDK 425
>gi|356534396|ref|XP_003535741.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g04780-like [Glycine max]
Length = 632
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 219/556 (39%), Positives = 326/556 (58%), Gaps = 27/556 (4%)
Query: 65 EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLF-- 122
E D++ T ++ Y + V R+ DEM K++I T I N A KL
Sbjct: 82 EMDILTSTMLINMYSKCSLVHSTRKKXDEMLVKSLILXNTRIGALTQNAEDRKALKLLIR 141
Query: 123 ---EVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILG-----LGQN 174
EV P NE + +++L I + +L A +K+ + SN + +
Sbjct: 142 MQREVTPF-NEFTISSVLCNCAFKCAILECMQL-HAFSIKAAIDSNCFVXTALLHVYAKC 199
Query: 175 GEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVL 234
++ A +F+ M EK+ TWS M+ Y + G+ E + LF Q G + ++ S +
Sbjct: 200 SSIKDASQMFESMPEKNAVTWSSMMAGYVQNGFHDEALLLFHNAQLMGFDQDPFNISSAV 259
Query: 235 SVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFAS-KDI 293
S CA LA+L G+QVHA + F ++YVAS LI MY KCG + + L+F+ F + I
Sbjct: 260 SACAGLATLVEGKQVHAMSHKSGFGSNIYVASSLIDMYAKCGCIREAYLVFEGFVEVRSI 319
Query: 294 VMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFES 353
V+WN++ISG+A++ L ++++ +F +M G PDDVT V VL+ACS+ G +EG++ F+
Sbjct: 320 VLWNAMISGFARHALAQEAMILFEKMQQRGFFPDDVTYVSVLNACSHMGLHEEGQKYFDL 379
Query: 354 MKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLG-------AC 406
M ++ + P HY+CM+D+LGRAG V+ A LI M F + +WGS+ G +C
Sbjct: 380 MVRQHNLSPSVLHYSCMIDILGRAGLVQKAYDLIGRMSFNATSSMWGSVRGLSXLIKASC 439
Query: 407 RTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPG 466
R + ++ AE+AAK L ++EP NAG +ILL+NIYA+ + +VA RK +R+ +V K G
Sbjct: 440 RIYGNIEFAEIAAKHLFEMEPNNAGNHILLANIYAANKKSDEVARARKLLRETDVRKERG 499
Query: 467 CSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGL---LREAGYCPDSSFVLHDVDEE 523
SWIE++ K+H FT V HP I K+ L L++ Y D++ LHDV+E
Sbjct: 500 TSWIEIKNKIHSFT----VGERNHPQIDDNYAKLDNLVVELKKLNYKVDTNNDLHDVEES 555
Query: 524 EKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDA 583
K L +HSEKLA+ +GLV LP +PIR++KNLR+CGDCH+ +KL+SK REII+RD
Sbjct: 556 RKHMLLGHHSEKLAITFGLVCLPTEIPIRIIKNLRICGDCHTFMKLVSKFASREIIVRDT 615
Query: 584 NRFHHFKDGLCSCRDY 599
NRFHHFKDGLCSC ++
Sbjct: 616 NRFHHFKDGLCSCGEF 631
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 110/228 (48%), Gaps = 36/228 (15%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFD- 61
+ N TA++ Y + I +A +F MPEKN V+W+ M+ G++++ D+A LF
Sbjct: 183 DSNCFVXTALLHVYAKCSSIKDASQMFESMPEKNAVTWSSMMAGYVQNGFHDEALLLFHN 242
Query: 62 ---MMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVA 118
M ++D ++ V + EG+++ M K SG+ +N I VA
Sbjct: 243 AQLMGFDQDPFNISSAVSACAGLATLVEGKQV-HAMSHK---------SGFGSN--IYVA 290
Query: 119 RKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKA-MPMKSVVASNSMILGLGQNGEV 177
L ++ Y +CG I++A+ +F+ + ++S+V N+MI G ++
Sbjct: 291 SSLIDM---------------YAKCGCIREAYLVFEGFVEVRSIVLWNAMISGFARHALA 335
Query: 178 QKARVVFDQMREK----DDATWSGMIKVYERKGYELEVIDLFTLMQKE 221
Q+A ++F++M+++ DD T+ ++ G E F LM ++
Sbjct: 336 QEAMILFEKMQQRGFFPDDVTYVSVLNACSHMGLHEEGQKYFDLMVRQ 383
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 83/173 (47%), Gaps = 2/173 (1%)
Query: 233 VLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKD 292
+L +CA S GR HAQ++R ++D+ +++LI MY KC + + D K
Sbjct: 56 LLQLCAKTGSSMGGRACHAQIIRIGLEMDILTSTMLINMYSKCSLVHSTRKKXDEMLVKS 115
Query: 293 IVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFE 352
+++ N+ I Q K+LK+ M ++ T+ VL C++ + E ++
Sbjct: 116 LILXNTRIGALTQNAEDRKALKLLIRMQREVTPFNEFTISSVLCNCAFKCAILECMQL-H 174
Query: 353 SMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
+ K ++ ++ + + ++DA ++ E+MP E +A+ W S++
Sbjct: 175 AFSIKAAIDSNCFVXTALLHVYAKCSSIKDASQMFESMP-EKNAVTWSSMMAG 226
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 105/221 (47%), Gaps = 24/221 (10%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLF-------WQMPEKNVVSWTVMLGGFIRDSRI 53
MPE+N V+W++M+ GYV+ G EA LF + N+ S G + +
Sbjct: 212 MPEKNAVTWSSMMAGYVQNGFHDEALLLFHNAQLMGFDQDPFNISSAVSACAGL---ATL 268
Query: 54 DDARRLFDMMPE----KDVVAQTNMVLGYCQDGRVDEGREIFDEMPK-KNVISWTTMISG 108
+ +++ M + ++ ++++ Y + G + E +F+ + ++++ W MISG
Sbjct: 269 VEGKQVHAMSHKSGFGSNIYVASSLIDMYAKCGCIREAYLVFEGFVEVRSIVLWNAMISG 328
Query: 109 YVNNNRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAMPMK----- 159
+ + A LFE M ++ ++V++ ++L + G ++ + F M +
Sbjct: 329 FARHALAQEAMILFEKMQQRGFFPDDVTYVSVLNACSHMGLHEEGQKYFDLMVRQHNLSP 388
Query: 160 SVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIK 200
SV+ + MI LG+ G VQKA + +M ++ G ++
Sbjct: 389 SVLHYSCMIDILGRAGLVQKAYDLIGRMSFNATSSMWGSVR 429
>gi|224069701|ref|XP_002303023.1| predicted protein [Populus trichocarpa]
gi|222844749|gb|EEE82296.1| predicted protein [Populus trichocarpa]
Length = 621
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 216/583 (37%), Positives = 322/583 (55%), Gaps = 45/583 (7%)
Query: 22 ITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQT---NMVLGY 78
I A +F NV +T ++ G + D L+ M +V + VL
Sbjct: 80 IGYASKIFSHTQNPNVYLYTALIDGLVLSCYYTDGIHLYYQMINSSLVPDSYAVTSVLKA 139
Query: 79 CQ-DGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAML 137
C + EGRE+ ++ K G +N I + KL E+
Sbjct: 140 CGCHLALKEGREVHSQVLKL----------GLSSNRSIRI--KLIEL------------- 174
Query: 138 MGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSG 197
Y +CG +DA +F MP + VVAS MI FD KD W+
Sbjct: 175 --YGKCGAFEDARRVFDEMPERDVVASTVMI------------NYYFDH-GIKDTVCWTA 219
Query: 198 MIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQ 257
MI R G +++F MQ+E V N +++ VLS C+ L +L GR V + + + +
Sbjct: 220 MIDGLVRNGESNRALEVFRNMQREDVMPNEVTIVCVLSACSELGALQLGRWVRSYMDKHR 279
Query: 258 FDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFH 317
+++ +V LI MY +CG++ + + +F+ K+++ +NS+I G+A +G +++++F
Sbjct: 280 IELNHFVGGALINMYSRCGDIDEAQRVFEQMKEKNVITYNSMIMGFALHGKSVEAVELFR 339
Query: 318 EMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRA 377
+ G P VT VGVL+ACS+ G + G EIF SM Y +EP+ EHY CMVDLLGR
Sbjct: 340 GLIKQGFTPSSVTFVGVLNACSHGGLAELGFEIFHSMAKDYGIEPQIEHYGCMVDLLGRL 399
Query: 378 GQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLS 437
G++E+A I M PD ++ G+LL AC+ H L+LAE AK L+ + ++G YILLS
Sbjct: 400 GRLEEAYSFIRMMKVAPDHVMLGALLSACKIHGNLELAERVAKSLVACKNADSGTYILLS 459
Query: 438 NIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRML 497
N Y+S G++ + AE+R NMR+ + K PGCS IEV ++H F D + HP+ I + L
Sbjct: 460 NAYSSSGKWKEAAEVRTNMREEGIEKEPGCSSIEVNNEIHEFLLGD-LRHPQKEKIYKKL 518
Query: 498 EKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNL 557
E++ +LR GY P + VLHD+++ EK +L HSE+LA+ YGL+ +RV+KNL
Sbjct: 519 EELNQILRLEGYTPATEVVLHDIEKSEKEWALAIHSERLAICYGLISTKPLTTLRVVKNL 578
Query: 558 RVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
RVC DCH IKLIS + R+I++RD NRFHHF++G+CSC DYW
Sbjct: 579 RVCNDCHLTIKLISNITRRKIVVRDRNRFHHFENGVCSCGDYW 621
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 86/393 (21%), Positives = 178/393 (45%), Gaps = 45/393 (11%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDS----RIDDARRLF 60
NV +TA++ G V T+ L++QM ++V + + ++ + + R +
Sbjct: 94 NVYLYTALIDGLVLSCYYTDGIHLYYQMINSSLVPDSYAVTSVLKACGCHLALKEGREVH 153
Query: 61 DMMPEKDVVAQTNMVLG----YCQDGRVDEGREIFDEMPKKNVIS--------------- 101
+ + + + ++ + Y + G ++ R +FDEMP+++V++
Sbjct: 154 SQVLKLGLSSNRSIRIKLIELYGKCGAFEDARRVFDEMPERDVVASTVMINYYFDHGIKD 213
Query: 102 ---WTTMISGYVNNNRIDVARKLF------EVMPEKNEVSWTAMLMGYTQCGRIQ-DAWE 151
WT MI G V N + A ++F +VMP NEV+ +L ++ G +Q W
Sbjct: 214 TVCWTAMIDGLVRNGESNRALEVFRNMQREDVMP--NEVTIVCVLSACSELGALQLGRW- 270
Query: 152 LFKAMPMKSVVASNSMILGLGQN-----GEVQKARVVFDQMREKDDATWSGMIKVYERKG 206
++ K + N + G N G++ +A+ VF+QM+EK+ T++ MI + G
Sbjct: 271 -VRSYMDKHRIELNHFVGGALINMYSRCGDIDEAQRVFEQMKEKNVITYNSMIMGFALHG 329
Query: 207 YELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQV-HAQLVRCQFDVDVYVA 265
+E ++LF + K+G + + + VL+ C+ + G ++ H+ + +
Sbjct: 330 KSVEAVELFRGLIKQGFTPSSVTFVGVLNACSHGGLAELGFEIFHSMAKDYGIEPQIEHY 389
Query: 266 SVLITMYIKCGELVKG-KLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGV 324
++ + + G L + I + D VM +++S +G E + +V + +
Sbjct: 390 GCMVDLLGRLGRLEEAYSFIRMMKVAPDHVMLGALLSACKIHGNLELAERVAKSLVACK- 448
Query: 325 MPDDVTLVGVLSACSYTGKVKEGREIFESMKSK 357
D T + + +A S +GK KE E+ +M+ +
Sbjct: 449 NADSGTYILLSNAYSSSGKWKEAAEVRTNMREE 481
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 73/155 (47%), Gaps = 4/155 (2%)
Query: 240 LASLDHGRQV---HAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMW 296
L + H Q+ +A+++R D +V L+ + + IF + + ++ ++
Sbjct: 39 LQNCKHNNQIPPIYAKIIRNHHHQDPFVVFELLRVCSNLNSIGYASKIFSHTQNPNVYLY 98
Query: 297 NSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKS 356
++I G + ++++M +S ++PD + VL AC +KEGRE+ +
Sbjct: 99 TALIDGLVLSCYYTDGIHLYYQMINSSLVPDSYAVTSVLKACGCHLALKEGREVHSQVLK 158
Query: 357 KYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMP 391
L ++ +++L G+ G EDA ++ + MP
Sbjct: 159 LGLSSNRSIRIK-LIELYGKCGAFEDARRVFDEMP 192
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 59/278 (21%), Positives = 111/278 (39%), Gaps = 64/278 (23%)
Query: 4 RNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVML------------------- 44
++ V WTAM+ G V G A +F M ++V+ V +
Sbjct: 212 KDTVCWTAMIDGLVRNGESNRALEVFRNMQREDVMPNEVTIVCVLSACSELGALQLGRWV 271
Query: 45 ---------------GG-----FIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRV 84
GG + R ID+A+R+F+ M EK+V+ +M++G+ G+
Sbjct: 272 RSYMDKHRIELNHFVGGALINMYSRCGDIDEAQRVFEQMKEKNVITYNSMIMGFALHGKS 331
Query: 85 DEGREIFDEMPKKNVISWTTMISGYVN----NNRIDVARKLFEVM-------PEKNEVSW 133
E E+F + K+ + G +N ++ ++F M P+
Sbjct: 332 VEAVELFRGLIKQGFTPSSVTFVGVLNACSHGGLAELGFEIFHSMAKDYGIEPQIEHYGC 391
Query: 134 TAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILG-----LGQNGEVQKARVVFDQM- 187
L+G + GR+++A+ + M VA + ++LG +G ++ A V +
Sbjct: 392 MVDLLG--RLGRLEEAYSFIRMMK----VAPDHVMLGALLSACKIHGNLELAERVAKSLV 445
Query: 188 --REKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGV 223
+ D T+ + Y G E ++ T M++EG+
Sbjct: 446 ACKNADSGTYILLSNAYSSSGKWKEAAEVRTNMREEGI 483
>gi|356562443|ref|XP_003549481.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 836
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 209/594 (35%), Positives = 328/594 (55%), Gaps = 73/594 (12%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVV 69
+ ++ Y + G + A +F + E+N VSWT ++ G + DDA LF+ M + VV
Sbjct: 313 SGLIDMYAKCGCLALARRVFNSLGEQNQVSWTCLISGVAQFGLRDDALALFNQMRQASVV 372
Query: 70 A---QTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMP 126
+LG C +N + ++ GY + +D +P
Sbjct: 373 LDEFTLATILGVCSG---------------QNYAATGELLHGYAIKSGMD------SFVP 411
Query: 127 EKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQ 186
N A++ Y +CG + A F++MP++ ++ +MI QNG++ +AR FD
Sbjct: 412 VGN-----AIITMYARCGDTEKASLAFRSMPLRDTISWTAMITAFSQNGDIDRARQCFDM 466
Query: 187 MREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHG 246
M E++ TW+ M+ Y + G+ E + L+ LM+ + V+ ++ + + + CA LA++ G
Sbjct: 467 MPERNVITWNSMLSTYIQHGFSEEGMKLYVLMRSKAVKPDWVTFATSIRACADLATIKLG 526
Query: 247 RQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQY 306
QV + + + DV VA+ ++TMY +CG++ + + +FD+ K+++ WN++++ +AQ
Sbjct: 527 TQVVSHVTKFGLSSDVSVANSIVTMYSRCGQIKEARKVFDSIHVKNLISWNAMMAAFAQN 586
Query: 307 GLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEH 366
GLG K+++ + +M + PD ++ V VLS
Sbjct: 587 GLGNKAIETYEDMLRTECKPDHISYVAVLS------------------------------ 616
Query: 367 YACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLE 426
DLLGRAG ++ A LI+ MPF+P+A +WG+LLGACR H LAE AAKKL++L
Sbjct: 617 -----DLLGRAGLLDQAKNLIDGMPFKPNATVWGALLGACRIHHDSILAETAAKKLMELN 671
Query: 427 PKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVS 486
+++G Y+LL+NIYA G +VA++RK M+ + + K PGCSWIEV+ +VH+FT D S
Sbjct: 672 VEDSGGYVLLANIYAESGELENVADMRKLMKVKGIRKSPGCSWIEVDNRVHVFT-VDETS 730
Query: 487 HPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLP 546
HP+ + LE++ + + G H S +YHSEKLA A+GL+ LP
Sbjct: 731 HPQINEVYVKLEEMMKKIEDTGRYVSIVSCAH--------RSQKYHSEKLAFAFGLLSLP 782
Query: 547 EGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
+PI+V KNLRVC DCH IKL+S V RE+I+RD RFHHFKDG CSCRDYW
Sbjct: 783 PWMPIQVTKNLRVCNDCHLVIKLLSLVTSRELIMRDGFRFHHFKDGFCSCRDYW 836
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 131/485 (27%), Positives = 228/485 (47%), Gaps = 35/485 (7%)
Query: 12 MVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPE--KDVV 69
++ Y GM+ +A +F + N+ +W ML F R+ +A LFD MP +D V
Sbjct: 45 LLHMYSNCGMVDDAFRVFREANHANIFTWNTMLHAFFDSGRMREAENLFDEMPHIVRDSV 104
Query: 70 AQTNMVLGYCQDGRVDEGREIFDEMPKK--------NVISWTTMIS--GYVNNNR--IDV 117
+ T M+ GYCQ+G + F M + + S+T + G + + R + +
Sbjct: 105 SWTTMISGYCQNGLPAHSIKTFMSMLRDSNHDIQNCDPFSYTCTMKACGCLASTRFALQL 164
Query: 118 ARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEV 177
+ ++ +++ Y +CG I A +F + S+ NSMI G Q
Sbjct: 165 HAHVIKLHLGAQTCIQNSLVDMYIKCGAITLAETVFLNIESPSLFCWNSMIYGYSQLYGP 224
Query: 178 QKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVC 237
+A VF +M E+D +W+ +I V+ + G+ + + F M G + NF + SVLS C
Sbjct: 225 YEALHVFTRMPERDHVSWNTLISVFSQYGHGIRCLSTFVEMCNLGFKPNFMTYGSVLSAC 284
Query: 238 ASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWN 297
AS++ L G +HA+++R + +D ++ S LI MY KCG L + +F++ ++ V W
Sbjct: 285 ASISDLKWGAHLHARILRMEHSLDAFLGSGLIDMYAKCGCLALARRVFNSLGEQNQVSWT 344
Query: 298 SIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACS-----YTGKVKEGREIFE 352
+ISG AQ+GL + +L +F++M + V+ D+ TL +L CS TG++ G I
Sbjct: 345 CLISGVAQFGLRDDALALFNQMRQASVVLDEFTLATILGVCSGQNYAATGELLHGYAIKS 404
Query: 353 SMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKL 412
M S V ++ + R G E A +MP D I W +++ A + +
Sbjct: 405 GMDSFVPVGNA------IITMYARCGDTEKASLAFRSMPLR-DTISWTAMITAFSQNGDI 457
Query: 413 DLAEVAAKKLLQLEP-KNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIE 471
D A++ + P +N + + + Y G + +L MR + +KP W+
Sbjct: 458 D----RARQCFDMMPERNVITWNSMLSTYIQHGFSEEGMKLYVLMRSK-AVKP---DWVT 509
Query: 472 VEKKV 476
+
Sbjct: 510 FATSI 514
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Query: 246 GRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQ 305
R++HAQL+ D +++ + L+ MY CG + +F +I WN+++ +
Sbjct: 23 ARKLHAQLILSGLDASLFLLNNLLHMYSNCGMVDDAFRVFREANHANIFTWNTMLHAFFD 82
Query: 306 YGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESM 354
G ++ +F EM ++ D V+ ++S G + F SM
Sbjct: 83 SGRMREAENLFDEM--PHIVRDSVSWTTMISGYCQNGLPAHSIKTFMSM 129
>gi|15225445|ref|NP_178983.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206168|sp|Q9SIT7.1|PP151_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g13600
gi|4558664|gb|AAD22682.1| hypothetical protein [Arabidopsis thaliana]
gi|330251150|gb|AEC06244.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 697
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 204/590 (34%), Positives = 320/590 (54%), Gaps = 86/590 (14%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MP+RN+ +W ++V G + G + EA +LF MPE++ +W M+ GF + R ++A F
Sbjct: 81 MPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYF 140
Query: 61 DMMPEK---------------------------------------DVVAQTNMVLGYCQD 81
MM ++ DV + +V Y +
Sbjct: 141 AMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKC 200
Query: 82 GRVDEGREIFDEMPKKNVISWTTMISGYVNNN----RIDVARKLFEVMPEKNEVSWTAML 137
G V++ + +FDEM +NV+SW ++I+ + N +DV + + E E +EV+ +++
Sbjct: 201 GNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVI 260
Query: 138 MG------------------------------------YTQCGRIQDAWELFKAMPMKSV 161
Y +C RI++A +F +MP+++V
Sbjct: 261 SACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNV 320
Query: 162 VASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKE 221
+A SMI G + AR++F +M E++ +W+ +I Y + G E + LF L+++E
Sbjct: 321 IAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRE 380
Query: 222 GVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDV------DVYVASVLITMYIKC 275
V S ++L CA LA L G Q H +++ F D++V + LI MY+KC
Sbjct: 381 SVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKC 440
Query: 276 GELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVL 335
G + +G L+F +D V WN++I G+AQ G G ++L++F EM SG PD +T++GVL
Sbjct: 441 GCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVL 500
Query: 336 SACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPD 395
SAC + G V+EGR F SM + V P +HY CMVDLLGRAG +E+A +IE MP +PD
Sbjct: 501 SACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPD 560
Query: 396 AIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKN 455
++IWGSLL AC+ H + L + A+KLL++EP N+GPY+LLSN+YA G++ DV +RK+
Sbjct: 561 SVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKS 620
Query: 456 MRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLR 505
MRK V K PGCSWI+++ H+F +D SHP I +L+ + +R
Sbjct: 621 MRKEGVTKQPGCSWIKIQGHDHVFMVKD-KSHPRKKQIHSLLDILIAEMR 669
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 158/300 (52%), Gaps = 4/300 (1%)
Query: 136 MLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATW 195
++ Y++CG ++D ++F MP +++ NS++ GL + G + +A +F M E+D TW
Sbjct: 61 LIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTW 120
Query: 196 SGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVR 255
+ M+ + + E + F +M KEG +N S SVLS C+ L ++ G QVH+ + +
Sbjct: 121 NSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAK 180
Query: 256 CQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKV 315
F DVY+ S L+ MY KCG + + +FD +++V WNS+I+ + Q G ++L V
Sbjct: 181 SPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDV 240
Query: 316 FHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLG 375
F M S V PD+VTL V+SAC+ +K G+E+ + + VD+
Sbjct: 241 FQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYA 300
Query: 376 RAGQVEDAMKLIEAMPFE----PDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAG 431
+ ++++A + ++MP ++I G + A +L ++A + ++ AG
Sbjct: 301 KCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAG 360
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 96/414 (23%), Positives = 195/414 (47%), Gaps = 77/414 (18%)
Query: 66 KDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVM 125
++ Q ++ Y + G +++GR++FD+MP++N+ +W ++++G +D A LF M
Sbjct: 53 NEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSM 112
Query: 126 PEKNEVSWTAMLMGYTQCGRIQDAWELFKAM----------PMKSVVAS----NSMILGL 171
PE+++ +W +M+ G+ Q R ++A F M SV+++ N M G+
Sbjct: 113 PERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGV 172
Query: 172 -------------------------GQNGEVQKARVVFDQMREKDDATWSGMIKVYERKG 206
+ G V A+ VFD+M +++ +W+ +I +E+ G
Sbjct: 173 QVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNG 232
Query: 207 YELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRC-QFDVDVYVA 265
+E +D+F +M + V + +L SV+S CASL+++ G++VH ++V+ + D+ ++
Sbjct: 233 PAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILS 292
Query: 266 SVLITMYIKCGELVKGKLIFDN-------------------------------FASKDIV 294
+ + MY KC + + + IFD+ A +++V
Sbjct: 293 NAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVV 352
Query: 295 MWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREI-FES 353
WN++I+GY Q G E++L +F + V P + +L AC+ ++ G +
Sbjct: 353 SWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHV 412
Query: 354 MKSKYLVEPKTEH----YACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
+K + + E ++D+ + G VE+ + M E D + W +++
Sbjct: 413 LKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKM-MERDCVSWNAMI 465
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 88/189 (46%), Gaps = 35/189 (18%)
Query: 247 RQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSI------- 299
R VHA +++ F ++++ + LI Y KCG L G+ +FD ++I WNS+
Sbjct: 40 RYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKL 99
Query: 300 ------------------------ISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVL 335
+SG+AQ+ E++L F M G + ++ + VL
Sbjct: 100 GFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVL 159
Query: 336 SACSYTGKVKEGREIFESM-KSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEP 394
SACS + +G ++ + KS +L + + +VD+ + G V DA ++ + M +
Sbjct: 160 SACSGLNDMNKGVQVHSLIAKSPFLSDVYIG--SALVDMYSKCGNVNDAQRVFDEMG-DR 216
Query: 395 DAIIWGSLL 403
+ + W SL+
Sbjct: 217 NVVSWNSLI 225
>gi|357154074|ref|XP_003576661.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Brachypodium distachyon]
Length = 802
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 196/547 (35%), Positives = 324/547 (59%), Gaps = 20/547 (3%)
Query: 49 RDSRIDDARRLFDMMPEK----DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTT 104
+ +DDAR++ + D +++ YC+ G V E ++FD+M K+++SWT+
Sbjct: 63 QSKNLDDARKIHAHLASSRFAGDAFLDNSLIHLYCKCGSVVEAHKVFDKMRNKDMVSWTS 122
Query: 105 MISGYVNNNRIDVARKLFEVMP-------EKNEVSWTAMLMG---YTQCGRIQDAWEL-F 153
+I+GY N D+ + ++P + N ++ ++L Y G L
Sbjct: 123 LIAGYAQN---DMPAEAIGLLPGMLKGRFKPNGFTFASLLKAVGAYADSGIGGQIHALAV 179
Query: 154 KAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVID 213
K + V ++++ + G++ A VFD++ K+ +W+ +I + RKG +
Sbjct: 180 KCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGDGETALM 239
Query: 214 LFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYI 273
+F MQ+ G + S+ S A + +L+ G+ VHA +++ + + +V + ++ MY
Sbjct: 240 VFAEMQRNGFEATHFTYSSIFSALAGIGALEQGKWVHAHMIKSRQKLTAFVGNTMLDMYA 299
Query: 274 KCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVG 333
K G ++ + +F+ +KD+V WNS+++ +AQYGLG++++ F EM SG+ + ++ +
Sbjct: 300 KSGSMIDARKVFERVLNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQISFLC 359
Query: 334 VLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFE 393
+L+ACS+ G VKEG+ F+ +K +Y +EP+ EHY +VDLLGRAG + A+ I MP E
Sbjct: 360 ILTACSHGGLVKEGKHYFDMIK-EYNLEPEIEHYVTVVDLLGRAGLLNYALVFIFKMPME 418
Query: 394 PDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELR 453
P A +WG+LL ACR H + + AA + QL+P ++GP +LL NIYAS G + A +R
Sbjct: 419 PTAAVWGALLAACRMHKNAKVGQFAADHVFQLDPDDSGPPVLLYNIYASTGHWDAAARVR 478
Query: 454 KNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDS 513
K M+ V K P CSW+E+E VHMF D +HP I +M ++I +R+ GY PD
Sbjct: 479 KMMKATGVKKEPACSWVEIENSVHMFVANDD-THPRAEEIYKMWDEISMKIRKEGYVPDM 537
Query: 514 SFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKV 573
+VL VDE+E+ +L+YHSEK+A+A+ L+++P G IR+MKN+R+CGDCHSA K ISKV
Sbjct: 538 DYVLLHVDEQEREANLQYHSEKIALAFALIQMPAGATIRIMKNIRICGDCHSAFKYISKV 597
Query: 574 MGREIIL 580
REI++
Sbjct: 598 FEREIVI 604
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 119/264 (45%), Gaps = 16/264 (6%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM------PEKNVVSWTVMLGGFIRDSRID 54
M +++VSWT+++ GY + M EA L M P + + G DS I
Sbjct: 112 MRNKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAVGAYADSGIG 171
Query: 55 DARRLFDMMPE--KDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+ + +DV + ++ Y + G++D +FD++ KN +SW +ISG+
Sbjct: 172 GQIHALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARK 231
Query: 113 NRIDVARKLFEVMP----EKNEVSWTAMLMGYTQCGRI-QDAW---ELFKAMPMKSVVAS 164
+ A +F M E +++++ G + Q W + K+ +
Sbjct: 232 GDGETALMVFAEMQRNGFEATHFTYSSIFSALAGIGALEQGKWVHAHMIKSRQKLTAFVG 291
Query: 165 NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVR 224
N+M+ ++G + AR VF+++ KD TW+ M+ + + G E + F M+K G+
Sbjct: 292 NTMLDMYAKSGSMIDARKVFERVLNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGIY 351
Query: 225 VNFPSLISVLSVCASLASLDHGRQ 248
+N S + +L+ C+ + G+
Sbjct: 352 LNQISFLCILTACSHGGLVKEGKH 375
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 85/172 (49%), Gaps = 2/172 (1%)
Query: 232 SVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASK 291
+ ++ CA +LD R++HA L +F D ++ + LI +Y KCG +V+ +FD +K
Sbjct: 56 AFITACAQSKNLDDARKIHAHLASSRFAGDAFLDNSLIHLYCKCGSVVEAHKVFDKMRNK 115
Query: 292 DIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIF 351
D+V W S+I+GYAQ + +++ + M P+ T +L A G +I
Sbjct: 116 DMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAVGAYADSGIGGQI- 174
Query: 352 ESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
++ K + ++D+ R G+++ A + + + + + W +L+
Sbjct: 175 HALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLD-SKNGVSWNALI 225
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 86/193 (44%), Gaps = 14/193 (7%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVV 69
+A++ Y G + A +F ++ KN VSW ++ GF R + A +F M
Sbjct: 191 SALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGDGETALMVFAEMQRNGFE 250
Query: 70 AQ----TNMVLGYCQDGRVDEGREIFDEMPKK----NVISWTTMISGYVNNNRIDVARKL 121
A +++ G +++G+ + M K TM+ Y + + ARK+
Sbjct: 251 ATHFTYSSIFSALAGIGALEQGKWVHAHMIKSRQKLTAFVGNTMLDMYAKSGSMIDARKV 310
Query: 122 FEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNS-----MILGLGQNGE 176
FE + K+ V+W +ML + Q G ++A F+ M KS + N ++ G
Sbjct: 311 FERVLNKDLVTWNSMLTAFAQYGLGKEAVSHFEEM-RKSGIYLNQISFLCILTACSHGGL 369
Query: 177 VQKARVVFDQMRE 189
V++ + FD ++E
Sbjct: 370 VKEGKHYFDMIKE 382
>gi|326488203|dbj|BAJ89940.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 637
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 211/564 (37%), Positives = 323/564 (57%), Gaps = 11/564 (1%)
Query: 46 GFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTM 105
G +R R R L + D V T +V Y G+V R +FD MPK+NV W +
Sbjct: 76 GSLRAGRQLHGRLLVSGL-GPDTVLSTKLVDLYAACGQVGHARRLFDGMPKRNVFLWNVL 134
Query: 106 ISGYVNNNRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAMPM--- 158
I Y + A +L+ M E + ++ +L ++ E+ + +
Sbjct: 135 IRAYAREGPREAAVRLYRGMVEHGVEPDNFTYPLVLKACAALLDLETGREVHQRVSGTRW 194
Query: 159 -KSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTL 217
+ V ++ + G V AR VFD + +D W+ MI Y + G +E + L
Sbjct: 195 GQDVFVCAGVVDMYAKCGCVDDARAVFDGIAVRDAVVWNSMIAAYGQNGRPMEALALCRD 254
Query: 218 MQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGE 277
M G+ +L+S +S A A+L GR++H R F + + + L+ MY K G
Sbjct: 255 MAANGIGPTIATLVSAVSAAADAAALPRGRELHGFGWRRGFGLQDKLKTSLVDMYAKSGW 314
Query: 278 LVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSG-VMPDDVTLVGVLS 336
+ +++F+ +++V WN++I GY +G +++L +F++M V PD++T VGVLS
Sbjct: 315 VQVARVLFEQLMKRELVSWNAMICGYGMHGHADEALALFNKMKGDAQVTPDNITFVGVLS 374
Query: 337 ACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDA 396
AC++ G V+E +E F M + Y ++P +HY C++D+LG G+ E+A LI+ M EPD+
Sbjct: 375 ACNHGGMVEEAKEFFYLMVNAYSIKPTVQHYTCVIDVLGHTGRFEEAYDLIKGMSIEPDS 434
Query: 397 IIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNM 456
IWG+LL C+ H ++L E+A +KL++LEP++AG Y+ LSNIYA G++ A +RK M
Sbjct: 435 GIWGALLNGCKIHKNVELGELALQKLIELEPEDAGNYVHLSNIYAQSGKWEKAARVRKLM 494
Query: 457 RKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFV 516
R + K CSWIE++ K H F D SHP I LE++ GL+ +AGY PD V
Sbjct: 495 TNRGLKKILACSWIELKGKTHGFLVGD-ASHPRSDEIYGELERLEGLMSDAGYVPDIIPV 553
Query: 517 LHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGR 576
H+VD++EK + +R HSE+LA+A+GL+ P G + V KNLRVC DCH IKLIS+++ R
Sbjct: 554 FHNVDDDEKRNMVRSHSERLAIAFGLISTPPGTKLLVTKNLRVCEDCHVVIKLISQIVQR 613
Query: 577 EIILRDANRFHHFKDGLCSCRDYW 600
EII+RD NR+HHF +G CSC+DYW
Sbjct: 614 EIIIRDVNRYHHFVNGECSCKDYW 637
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 95/176 (53%), Gaps = 6/176 (3%)
Query: 232 SVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASK 291
S+L C + SL GRQ+H +L+ D +++ L+ +Y CG++ + +FD +
Sbjct: 67 SILQSCVASGSLRAGRQLHGRLLVSGLGPDTVLSTKLVDLYAACGQVGHARRLFDGMPKR 126
Query: 292 DIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIF 351
++ +WN +I YA+ G E +++++ M GV PD+ T VL AC+ ++ GRE+
Sbjct: 127 NVFLWNVLIRAYAREGPREAAVRLYRGMVEHGVEPDNFTYPLVLKACAALLDLETGREVH 186
Query: 352 ESMKSKYLVEPKTEHYAC--MVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
+ + + + + C +VD+ + G V+DA + + + DA++W S++ A
Sbjct: 187 QRVSGTRWGQ---DVFVCAGVVDMYAKCGCVDDARAVFDGIAVR-DAVVWNSMIAA 238
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 83/373 (22%), Positives = 154/373 (41%), Gaps = 63/373 (16%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMP 64
+ V T +V Y G + A LF MP++NV W V++ + R+ + A RL+ M
Sbjct: 96 DTVLSTKLVDLYAACGQVGHARRLFDGMPKRNVFLWNVLIRAYAREGPREAAVRLYRGMV 155
Query: 65 EKDVVAQT---NMVLGYCQD-GRVDEGREIFDEMP----KKNVISWTTMISGYVNNNRID 116
E V +VL C ++ GRE+ + ++V ++ Y +D
Sbjct: 156 EHGVEPDNFTYPLVLKACAALLDLETGREVHQRVSGTRWGQDVFVCAGVVDMYAKCGCVD 215
Query: 117 VARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVAS------------ 164
AR +F+ + ++ V W +M+ Y Q GR +A L + M + +
Sbjct: 216 DARAVFDGIAVRDAVVWNSMIAAYGQNGRPMEALALCRDMAANGIGPTIATLVSAVSAAA 275
Query: 165 ---------------------------NSMILGLGQNGEVQKARVVFDQMREKDDATWSG 197
S++ ++G VQ ARV+F+Q+ +++ +W+
Sbjct: 276 DAAALPRGRELHGFGWRRGFGLQDKLKTSLVDMYAKSGWVQVARVLFEQLMKRELVSWNA 335
Query: 198 MIKVYERKGYELEVIDLFTLMQKEG-VRVNFPSLISVLSVCASLASLDHGRQ-----VHA 251
MI Y G+ E + LF M+ + V + + + VLS C ++ ++ V+A
Sbjct: 336 MICGYGMHGHADEALALFNKMKGDAQVTPDNITFVGVLSACNHGGMVEEAKEFFYLMVNA 395
Query: 252 QLVRCQFDVDVYVASVL--ITMYIKCGELVKGKLIFDNFASKDIVMWNSIISG---YAQY 306
++ V VL + + +L+KG I D +W ++++G +
Sbjct: 396 YSIKPTVQHYTCVIDVLGHTGRFEEAYDLIKGMSI-----EPDSGIWGALLNGCKIHKNV 450
Query: 307 GLGEKSLKVFHEM 319
LGE +L+ E+
Sbjct: 451 ELGELALQKLIEL 463
>gi|125577145|gb|EAZ18367.1| hypothetical protein OsJ_33897 [Oryza sativa Japonica Group]
Length = 730
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 226/635 (35%), Positives = 350/635 (55%), Gaps = 43/635 (6%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIR----DSRIDDA 56
MPERNVV+WTA+V GY +F +M E LG + +D
Sbjct: 99 MPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNACLASCDVDLG 158
Query: 57 RRLFDMMPEKDVVAQTNMVLGYC----QDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+++ + + T+M C + G +D F +P+KNVI+WTTMIS +
Sbjct: 159 KQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITWTTMISACAED 218
Query: 113 NR-IDVARKLF------EVMPEKNEVSWTAMLMGYTQCGRIQD--------AWELFKAMP 157
+++ LF VMP NE + T+++ + CG D A+
Sbjct: 219 EECVELGMSLFIDMLMDGVMP--NEFTLTSVM---SLCGTRLDLNLGKQVQAFSFKIGCE 273
Query: 158 MKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVY-----------ERKG 206
V +++M L L + GE +A +F+QM + TW+ MI Y + +
Sbjct: 274 TNLPVKNSTMYLYL-RKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDLQARS 332
Query: 207 YELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVAS 266
+ + +F +++ ++ + + S+LSVC+++ +L+ G Q+HAQ ++ F DV V S
Sbjct: 333 RGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNS 392
Query: 267 VLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMP 326
L+ MY KCG + F ++ V W S+ISGY+Q+G ++++++F EM +GV P
Sbjct: 393 ALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGVRP 452
Query: 327 DDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKL 386
+++T V +LSACSY G V+E F+ MK +Y +EP +HY CM+D+ R G+VEDA
Sbjct: 453 NEITFVSLLSACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVEDAFSF 512
Query: 387 IEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRF 446
I+ FEP+ IW SL+ CR+H ++LA AA KLL+L+PK YILL N+Y S R+
Sbjct: 513 IKRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADKLLELKPKGIETYILLLNMYISTERW 572
Query: 447 HDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLRE 506
DVA +RK M++ +V SWI ++ KV+ F D +HP+ + ++LE + +
Sbjct: 573 QDVARVRKLMKQEDVGILRDRSWITIKDKVYFFRAND-RTHPQATELYQLLENLLEKAKA 631
Query: 507 AGYCPDSSFVLHDVDEEEK--VHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCH 564
GY P + L D +++EK SL++HSE+LAVA GL++ P G +RV KN+ +C DCH
Sbjct: 632 IGYEPYQNAELSDSEDDEKPAAGSLKHHSERLAVALGLLQTPPGATVRVTKNITMCRDCH 691
Query: 565 SAIKLISKVMGREIILRDANRFHHFKDGLCSCRDY 599
S+IKL S + REII+RD+ R H FKDG CSC D+
Sbjct: 692 SSIKLFSLLENREIIVRDSKRLHKFKDGRCSCGDF 726
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 108/228 (47%), Gaps = 3/228 (1%)
Query: 177 VQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSV 236
+ AR +FD M E++ TW+ ++ Y +++F M + G + +L + L+
Sbjct: 89 ARDARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNA 148
Query: 237 CASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMW 296
C + +D G+QVH ++ + + + L ++Y K G L F K+++ W
Sbjct: 149 CLASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITW 208
Query: 297 NSIISGYAQ-YGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMK 355
++IS A+ E + +F +M GVMP++ TL V+S C + G+++ ++
Sbjct: 209 TTMISACAEDEECVELGMSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQV-QAFS 267
Query: 356 SKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
K E + L R G+ ++AM+L E M + I W +++
Sbjct: 268 FKIGCETNLPVKNSTMYLYLRKGETDEAMRLFEQME-DASIITWNAMI 314
>gi|125575213|gb|EAZ16497.1| hypothetical protein OsJ_31969 [Oryza sativa Japonica Group]
Length = 617
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 222/622 (35%), Positives = 340/622 (54%), Gaps = 27/622 (4%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MP RN VSWT +V G + M +A F M V L R + A
Sbjct: 1 MPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRFALSSAARAAAALGAPLPG 60
Query: 61 DMMP--------EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+ + ++ +N+ Y + G + E +FD+MP+K+ ++WT MI GY N
Sbjct: 61 AQLHCVGVRLGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKN 120
Query: 113 NRIDVARKLFEVMPEKNEVSWTAMLMG--YTQCGRIQDAWE-------LFKAMPMKSVVA 163
++ A F M + V + + G ++D W + KA V
Sbjct: 121 GSLEAAVLSFRDMKREGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVAV 180
Query: 164 SNSMILGLGQNGEVQKARVVFDQMREKDDATW-----SGMIKVYERKGYELEVIDLFTLM 218
N++I ++ +V+ A V + D W + MI Y E + ++ +
Sbjct: 181 RNALIDMYAKSMDVESASRVL----KIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVEL 236
Query: 219 QKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGEL 278
+++GV N + S++ CA A L+ G Q+HAQ+++ D +V S L+ MY KCG +
Sbjct: 237 RRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLI 296
Query: 279 VKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSAC 338
+F+ + + WN++I+ +AQ+G G ++++ F M SG+ P+ + V +L+AC
Sbjct: 297 SLSMQLFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTAC 356
Query: 339 SYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAII 398
S+ G V EG + F SMK + +EPK EHY+C++D GRAG++++A K I MP +P+A
Sbjct: 357 SHAGLVDEGLKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPIKPNAYG 416
Query: 399 WGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRK 458
W SLLGACR +L EVAA+ L++LEP N G ++ LS IYAS G++ DV +RK MR
Sbjct: 417 WCSLLGACRMRGSKELGEVAAQNLMKLEPGNTGIHVSLSGIYASLGQWEDVKAVRKLMRD 476
Query: 459 RNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLH 518
+ K PG SW++ KK H+F D SHP+ I LE++ ++E GY PD+SF+
Sbjct: 477 SRIKKLPGFSWVDSNKKTHVFGSED-WSHPQQKDIYEKLEELTTRIKEEGYIPDTSFLPC 535
Query: 519 DVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREI 578
++++ K LRYHSE++AVA+ L+ +P PI V KNLR+C DCH+A K I KV R+I
Sbjct: 536 NLEDIAKERILRYHSERIAVAFALISMPATKPIIVKKNLRICIDCHTAFKFICKVERRDI 595
Query: 579 ILRDANRFHHFKDGLCSCRDYW 600
I+RD +RFHHF +G CSC DYW
Sbjct: 596 IVRDNSRFHHFVNGRCSCGDYW 617
>gi|302822426|ref|XP_002992871.1| hypothetical protein SELMODRAFT_136134 [Selaginella moellendorffii]
gi|300139319|gb|EFJ06062.1| hypothetical protein SELMODRAFT_136134 [Selaginella moellendorffii]
Length = 716
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 220/634 (34%), Positives = 355/634 (55%), Gaps = 42/634 (6%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM----PEKNVVSWTVMLGGF-----IRDS 51
M +++ +W++++ Y G A L+ +M E NVV++ LGG + D
Sbjct: 91 MEIKDLFAWSSIIAAYARAGRGEMAVVLYRRMIAEGVEPNVVTFACALGGCASVAGLADG 150
Query: 52 RIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVN 111
R R L +P+ DV+ Q +++ Y + + E R++F+ M +NV S+T MIS YV
Sbjct: 151 RAIHQRILASKVPQDDVL-QDSLLNMYLKCDEMVEARKVFEGMKARNVRSYTAMISAYVQ 209
Query: 112 NNRIDVARKLFEVMP-----EKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMK----SVV 162
A +LF M E N ++ +L G ++ ++ + + + +VV
Sbjct: 210 AGEHAEALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEKGRKVHRHLASRGFDTNVV 269
Query: 163 ASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEG 222
N+++ G+ G +AR VFD M ++ +W+ MI Y + G E ++LF M E
Sbjct: 270 VQNALVTMYGKCGSPVEARKVFDSMTARNVISWTSMIAAYAQHGNPQEALNLFKRMDVEP 329
Query: 223 VRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGK 282
V+F S L+ CA L +LD GR++H ++V + + L++MY +CG L +
Sbjct: 330 SGVSFSS---ALNACALLGALDEGREIHHRVVEANL-ASPQMETSLLSMYARCGSLDDAR 385
Query: 283 LIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTG 342
+F+ ++D N++I+ + Q+G +++L+++ +M G+ D +T V VL ACS+T
Sbjct: 386 RVFNRMKTRDAFSCNAMIAAFTQHGRKKQALRIYRKMEQEGIPADGITFVSVLVACSHTS 445
Query: 343 KVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSL 402
V + R+ +S+ + V P EHY CMVD+LGR+G++ DA +L+E MP++ DA+ W +L
Sbjct: 446 LVADCRDFLQSLVMDHGVVPLVEHYLCMVDVLGRSGRLGDAEELVETMPYQADAVAWMTL 505
Query: 403 LGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVI 462
L C+ H LD E AA+K+ +L P PY+ LSN+YA+ RF D +RK M +R V
Sbjct: 506 LSGCKRHGDLDRGERAARKVFELAPAETLPYVFLSNMYAAAKRFDDARRVRKEMEERGVT 565
Query: 463 KPPGCSWIEVEKKVHMFT--GRDCVSHPEHPMIMRMLEKIGGLL-------REAGYCPDS 513
+P S+IE++ ++HMFT GRD + R +E++ LL ++AGY PD+
Sbjct: 566 RPVAVSYIEIDNELHMFTSGGRD---EQQEGHDGRTMERVRSLLVELLEPMKQAGYVPDT 622
Query: 514 SFVLHD----VDEEEKVHSLRYHSEKLAVAYGLV--KLP-EGVPIRVMKNLRVCGDCHSA 566
V + EEEK SL +HSE+LA+AYGL+ K P + P+RV+ + RVC CHSA
Sbjct: 623 REVYLEQQGVTSEEEKQRSLCFHSERLAIAYGLIAAKDPDDSRPLRVVNSHRVCSGCHSA 682
Query: 567 IKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
IKL+S + + I +RD +RFHHF+ G CSC D+W
Sbjct: 683 IKLLSDITEKRIFVRDGSRFHHFEKGACSCGDHW 716
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 110/415 (26%), Positives = 210/415 (50%), Gaps = 23/415 (5%)
Query: 12 MVRGYVEEGMITEAGTLFWQMPEKNVVS----WTVMLGGFIRDSRIDDARRLFDMMP--- 64
M+ V EG +A L+ +M E+ +V+ T ++ + +++ RRL + +
Sbjct: 1 MIAACVREGRPLQALELWGEMEERGIVADKFIVTSLVAACTKLQALEEGRRLHEHLIITG 60
Query: 65 -EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFE 123
D+ +T ++ Y + G +D+ + +F+ M K++ +W+++I+ Y R ++A L+
Sbjct: 61 FRTDIPLETALLQMYAKCGSLDDAKRVFEGMEIKDLFAWSSIIAAYARAGRGEMAVVLYR 120
Query: 124 VM----PEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSV----VASNSMILGLGQNG 175
M E N V++ L G + D + + + V V +S++ +
Sbjct: 121 RMIAEGVEPNVVTFACALGGCASVAGLADGRAIHQRILASKVPQDDVLQDSLLNMYLKCD 180
Query: 176 EVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQK-EGVRVNFPSLISVL 234
E+ +AR VF+ M+ ++ +++ MI Y + G E ++LF+ M K E + N + ++L
Sbjct: 181 EMVEARKVFEGMKARNVRSYTAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATIL 240
Query: 235 SVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIV 294
L +L+ GR+VH L FD +V V + L+TMY KCG V+ + +FD+ +++++
Sbjct: 241 GAVEGLGNLEKGRKVHRHLASRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTARNVI 300
Query: 295 MWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESM 354
W S+I+ YAQ+G +++L +F M V P V+ L+AC+ G + EGREI +
Sbjct: 301 SWTSMIAAYAQHGNPQEALNLFKRM---DVEPSGVSFSSALNACALLGALDEGREIHHRV 357
Query: 355 KSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTH 409
L P+ E ++ + R G ++DA ++ M DA +++ A H
Sbjct: 358 VEANLASPQME--TSLLSMYARCGSLDDARRVFNRMKTR-DAFSCNAMIAAFTQH 409
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 90/433 (20%), Positives = 179/433 (41%), Gaps = 80/433 (18%)
Query: 74 MVLGYCQDGRVDEGREIFDEMPKKNVIS----WTTMISGYVNNNRIDVARKLFE---VMP 126
M+ ++GR + E++ EM ++ +++ T++++ ++ R+L E +
Sbjct: 1 MIAACVREGRPLQALELWGEMEERGIVADKFIVTSLVAACTKLQALEEGRRLHEHLIITG 60
Query: 127 EKNEVSW-TAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFD 185
+ ++ TA+L Y +CG + DA +F+ M +
Sbjct: 61 FRTDIPLETALLQMYAKCGSLDDAKRVFEGMEI--------------------------- 93
Query: 186 QMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDH 245
KD WS +I Y R G + L+ M EGV N + L CAS+A L
Sbjct: 94 ----KDLFAWSSIIAAYARAGRGEMAVVLYRRMIAEGVEPNVVTFACALGGCASVAGLAD 149
Query: 246 GRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQ 305
GR +H +++ + D + L+ MY+KC E+V+ + +F+ ++++ + ++IS Y Q
Sbjct: 150 GRAIHQRILASKVPQDDVLQDSLLNMYLKCDEMVEARKVFEGMKARNVRSYTAMISAYVQ 209
Query: 306 YGLGEKSLKVFHEMFS-SGVMPDDVTLVGVLSACSYTGKVKEG----------------- 347
G ++L++F M + P+ T +L A G +++G
Sbjct: 210 AGEHAEALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEKGRKVHRHLASRGFDTNVV 269
Query: 348 ------------------REIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEA 389
R++F+SM ++ ++ + M+ + G ++A+ L +
Sbjct: 270 VQNALVTMYGKCGSPVEARKVFDSMTARNVIS-----WTSMIAAYAQHGNPQEALNLFKR 324
Query: 390 MPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDV 449
M EP + + S L AC LD ++++ + L ++YA G D
Sbjct: 325 MDVEPSGVSFSSALNACALLGALDEGREIHHRVVEANLASPQMETSLLSMYARCGSLDDA 384
Query: 450 AELRKNMRKRNVI 462
+ M+ R+
Sbjct: 385 RRVFNRMKTRDAF 397
>gi|224096620|ref|XP_002310674.1| predicted protein [Populus trichocarpa]
gi|222853577|gb|EEE91124.1| predicted protein [Populus trichocarpa]
Length = 908
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 216/620 (34%), Positives = 350/620 (56%), Gaps = 24/620 (3%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEA----GTLFWQMPEKNVVSWTVMLGG-----FIRDS 51
M E++++SW +M+ Y ++G +A T+F+ N V++T L F +
Sbjct: 293 MVEKDMISWNSMMACYAQDGNCLDALKLLATMFYMRRGANYVTFTSALAACSDPEFATEG 352
Query: 52 RIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVN 111
+I A + + E +V+ +V Y + G + E +++F MPK++ ++W +I G+ +
Sbjct: 353 KILHALVIHVGLHE-NVIVGNALVTLYAKSGLMIEAKKVFQTMPKRDGVTWNALIGGHAD 411
Query: 112 NNRIDVARKLFEVMPEKN-EVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVV-------- 162
+ D A K F++M E+ +++ + C D E MP+ + +
Sbjct: 412 SEEPDEALKAFKLMREEGVPINYITISNVLGACLAPNDLLE--HGMPIHAFIILTGFQSD 469
Query: 163 --ASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQK 220
NS+I + G++ + +FD++ K+ + W+ M+ G+ E + M++
Sbjct: 470 EYVQNSLITMYAKCGDLNSSNNIFDRLTSKNASAWNAMMAANAHHGHMEEALKFLLEMRR 529
Query: 221 EGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVK 280
GV V+ S L+ A LA L+ G+Q+H V+ D + +VAS + MY KCGE+
Sbjct: 530 AGVNVDEFSFSECLAAAAKLAILEEGQQLHGLAVKLGCDSNPFVASATMDMYGKCGEIDD 589
Query: 281 GKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSY 340
I ++ + WN + S ++++G EK+ + FHEM + GV PD VT V +LSACS+
Sbjct: 590 VLRIIPRPINRSRLSWNILTSSFSRHGFFEKAKETFHEMINLGVKPDHVTFVSLLSACSH 649
Query: 341 TGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWG 400
G V+EG ++SM ++ + K H C++DLLGR+G+ +A I+ MP P +W
Sbjct: 650 GGMVEEGLAYYDSMIKEFGIPAKIGHCVCIIDLLGRSGRFAEAETFIKEMPVSPTDHVWR 709
Query: 401 SLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRN 460
SLL AC+TH L+L A + LL+L+P + Y+L SNI A+ G++ DV ++R+ M
Sbjct: 710 SLLAACKTHGNLELGRKAVENLLKLDPSDDSAYVLYSNICATTGKWEDVEKIRRQMGLNK 769
Query: 461 VIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDV 520
+ K P CSW++++ K+ +F D SHP+ I LE++ +++EAGY PD S+ L D
Sbjct: 770 IKKKPACSWVKLKNKLSLFGMGD-HSHPQASEIYAKLEELKKMIKEAGYIPDISYALQDT 828
Query: 521 DEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIIL 580
DEE+K H+L HSE+LA+AYGL+ PEG +++ KNLRVCGDCHS K S ++GR+I+L
Sbjct: 829 DEEQKEHNLWNHSERLALAYGLISSPEGSTLKIFKNLRVCGDCHSVYKFASGILGRKIVL 888
Query: 581 RDANRFHHFKDGLCSCRDYW 600
RD RFH F G CSC DYW
Sbjct: 889 RDPYRFHQFSGGQCSCTDYW 908
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 110/393 (27%), Positives = 185/393 (47%), Gaps = 28/393 (7%)
Query: 66 KDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVM 125
DV T++V Y G + ++F EM KNV+SWT ++ YV+ + ++ M
Sbjct: 63 SDVFVGTSLVHLYGNYGLAADAMKVFQEMIYKNVVSWTALMVAYVDYGEPSMVMNIYRRM 122
Query: 126 PEKNE--------------VSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGL 171
+ VS L+GY G + K +V +NS+I
Sbjct: 123 RSEGMSCNDNTMSSVISTCVSLENELLGYQVLGHV------IKYGLETNVSVANSLISMF 176
Query: 172 GQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLI 231
G G V++A VF M E D +W+ MI Y R G E + F+ M + +N +L
Sbjct: 177 GYFGSVEEACYVFSGMDEHDTISWNSMIAAYIRNGLCKESLRCFSWMFRVHKEINSTTLS 236
Query: 232 SVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASK 291
++L+ C S+ +L GR +H+ +++ ++ +V ++ LITMY G +L+F K
Sbjct: 237 TMLAGCGSVDNLKWGRGIHSLVLKFGWNSNVCASNTLITMYSDAGRCEDAELVFQGMVEK 296
Query: 292 DIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIF 351
D++ WNS+++ YAQ G +LK+ MF + VT L+ACS EG+ I
Sbjct: 297 DMISWNSMMACYAQDGNCLDALKLLATMFYMRRGANYVTFTSALAACSDPEFATEGK-IL 355
Query: 352 ESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMK 411
++ + +V L ++G + +A K+ + MP + D + W +L+G +
Sbjct: 356 HALVIHVGLHENVIVGNALVTLYAKSGLMIEAKKVFQTMP-KRDGVTWNALIGGHADSEE 414
Query: 412 LDLAEVAAKKLLQLE--PKNAGPYILLSNIYAS 442
D A + A KL++ E P N YI +SN+ +
Sbjct: 415 PDEA-LKAFKLMREEGVPIN---YITISNVLGA 443
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 95/359 (26%), Positives = 167/359 (46%), Gaps = 26/359 (7%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEK----------NVVSWTVMLGGFIRD 50
M +NVVSWTA++ YV+ G + ++ +M + +V+S V L +
Sbjct: 91 MIYKNVVSWTALMVAYVDYGEPSMVMNIYRRMRSEGMSCNDNTMSSVISTCVSLENELLG 150
Query: 51 SRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYV 110
++ + E +V +++ + G V+E +F M + + ISW +MI+ Y+
Sbjct: 151 YQV--LGHVIKYGLETNVSVANSLISMFGYFGSVEEACYVFSGMDEHDTISWNSMIAAYI 208
Query: 111 NNNRIDVARK----LFEVMPEKNEVSWTAMLMGYTQCGRIQD-AWE------LFKAMPMK 159
N + + +F V E N + + ML G CG + + W + K
Sbjct: 209 RNGLCKESLRCFSWMFRVHKEINSTTLSTMLAG---CGSVDNLKWGRGIHSLVLKFGWNS 265
Query: 160 SVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQ 219
+V ASN++I G + A +VF M EKD +W+ M+ Y + G L+ + L M
Sbjct: 266 NVCASNTLITMYSDAGRCEDAELVFQGMVEKDMISWNSMMACYAQDGNCLDALKLLATMF 325
Query: 220 KEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELV 279
N+ + S L+ C+ G+ +HA ++ +V V + L+T+Y K G ++
Sbjct: 326 YMRRGANYVTFTSALAACSDPEFATEGKILHALVIHVGLHENVIVGNALVTLYAKSGLMI 385
Query: 280 KGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSAC 338
+ K +F +D V WN++I G+A +++LK F M GV + +T+ VL AC
Sbjct: 386 EAKKVFQTMPKRDGVTWNALIGGHADSEEPDEALKAFKLMREEGVPINYITISNVLGAC 444
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 124/261 (47%), Gaps = 8/261 (3%)
Query: 158 MKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTL 217
+ V S++ G G A VF +M K+ +W+ ++ Y G V++++
Sbjct: 62 LSDVFVGTSLVHLYGNYGLAADAMKVFQEMIYKNVVSWTALMVAYVDYGEPSMVMNIYRR 121
Query: 218 MQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGE 277
M+ EG+ N ++ SV+S C SL + G QV +++ + +V VA+ LI+M+ G
Sbjct: 122 MRSEGMSCNDNTMSSVISTCVSLENELLGYQVLGHVIKYGLETNVSVANSLISMFGYFGS 181
Query: 278 LVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSA 337
+ + +F D + WNS+I+ Y + GL ++SL+ F MF + TL +L+
Sbjct: 182 VEEACYVFSGMDEHDTISWNSMIAAYIRNGLCKESLRCFSWMFRVHKEINSTTLSTMLAG 241
Query: 338 CSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAI 397
C +K GR I S+ K+ ++ + AG+ EDA + + M E D I
Sbjct: 242 CGSVDNLKWGRGI-HSLVLKFGWNSNVCASNTLITMYSDAGRCEDAELVFQGM-VEKDMI 299
Query: 398 IWGSLL------GACRTHMKL 412
W S++ G C +KL
Sbjct: 300 SWNSMMACYAQDGNCLDALKL 320
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 93/205 (45%), Gaps = 3/205 (1%)
Query: 202 YERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCA-SLASLDHGRQVHAQLVRCQFDV 260
+ R G E + F M+ GV+ + ++ S+++ C S L G QVH +V+
Sbjct: 4 FVRAGSYRESMRFFNEMRDFGVKPSGIAVASLVTACERSEWMLIEGVQVHGFIVKVGLLS 63
Query: 261 DVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMF 320
DV+V + L+ +Y G +F K++V W +++ Y YG + ++ M
Sbjct: 64 DVFVGTSLVHLYGNYGLAADAMKVFQEMIYKNVVSWTALMVAYVDYGEPSMVMNIYRRMR 123
Query: 321 SSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQV 380
S G+ +D T+ V+S C G ++ + KY +E ++ + G G V
Sbjct: 124 SEGMSCNDNTMSSVISTCVSLENELLGYQVLGHVI-KYGLETNVSVANSLISMFGYFGSV 182
Query: 381 EDAMKLIEAMPFEPDAIIWGSLLGA 405
E+A + M E D I W S++ A
Sbjct: 183 EEACYVFSGMD-EHDTISWNSMIAA 206
>gi|359495698|ref|XP_003635064.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic-like [Vitis vinifera]
Length = 650
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 220/583 (37%), Positives = 332/583 (56%), Gaps = 33/583 (5%)
Query: 22 ITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNM---VLGY 78
I A +F NV +T ++ GF+ DA +L+ M ++ + +L
Sbjct: 97 IDYASRIFQYTHNPNVYLYTALIDGFVSSGNYFDAIQLYSRMLHDSILPDNYLMASILKA 156
Query: 79 CQDG-RVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAML 137
C + EGRE+ K + S NR+ V ++ E+
Sbjct: 157 CGSQLALREGREVHSRALKLGLSS-----------NRL-VRLRIMEL------------- 191
Query: 138 MGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSG 197
Y +CG + DA +F+ MP + VVAS MI G V++A VF ++R KD W+
Sbjct: 192 --YGKCGELGDARRVFEEMP-EDVVASTVMISSYSDQGLVEEAGAVFSRVRRKDTVCWTA 248
Query: 198 MIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQ 257
MI + R ++ F MQ E VR N +++ VLS C+ L +L+ GR VH+ + + +
Sbjct: 249 MIDGFVRNEEMNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFE 308
Query: 258 FDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFH 317
+++++V + LI MY +CG + + + +FD +D++ +N++ISG + G +++++F
Sbjct: 309 IELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNGKSRQAIELFR 368
Query: 318 EMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRA 377
M + P +VT VGVL+ACS+ G V G +IF SM Y VEP+ EHY CMVDLLGR
Sbjct: 369 VMIGRRLRPTNVTFVGVLNACSHGGLVDFGFKIFHSMTRDYGVEPQIEHYGCMVDLLGRV 428
Query: 378 GQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLS 437
G++E+A LI M PD I+ G+LL AC+ H L+L E AK L ++G Y+LLS
Sbjct: 429 GRLEEAYDLIRTMKMTPDHIMLGTLLSACKMHKNLELGEQVAKVLEDRGQADSGTYVLLS 488
Query: 438 NIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRML 497
++YAS G++ + A++R M++ + K PGCS IEV ++H F D + HP I L
Sbjct: 489 HVYASSGKWKEAAQVRAKMKEAGMQKEPGCSSIEVNNEIHEFLLGD-LRHPRKERIYEKL 547
Query: 498 EKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNL 557
E++ LLR GY P+ VL D+++ EK +L HSE+LA+ YGL+ IRVMKNL
Sbjct: 548 EELNRLLRLEGYHPEKEVVLQDIEDGEKEWALAIHSERLAICYGLISTEPCTVIRVMKNL 607
Query: 558 RVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
RVC DCHSAIKLI+K+ R++++RD NRFH+F++G CSC DYW
Sbjct: 608 RVCYDCHSAIKLIAKITRRKVVVRDRNRFHYFENGACSCGDYW 650
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 94/404 (23%), Positives = 175/404 (43%), Gaps = 59/404 (14%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGF---------IRDSR--- 52
NV +TA++ G+V G +A L+ +M +++ ++ +R+ R
Sbjct: 111 NVYLYTALIDGFVSSGNYFDAIQLYSRMLHDSILPDNYLMASILKACGSQLALREGREVH 170
Query: 53 ---------------------------IDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVD 85
+ DARR+F+ MPE DVVA T M+ Y G V+
Sbjct: 171 SRALKLGLSSNRLVRLRIMELYGKCGELGDARRVFEEMPE-DVVASTVMISSYSDQGLVE 229
Query: 86 EGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMP----EKNEVSWTAMLMGYT 141
E +F + +K+ + WT MI G+V N ++ A + F M NE + +L +
Sbjct: 230 EAGAVFSRVRRKDTVCWTAMIDGFVRNEEMNRALEAFRGMQGENVRPNEFTIVCVLSACS 289
Query: 142 QCGRIQDAWELFKAMPMKSV----VASNSMILGLGQNGEVQKARVVFDQMREKDDATWSG 197
Q G ++ + M + N++I + G + +A+ VFD+M+++D T++
Sbjct: 290 QLGALEIGRWVHSYMRKFEIELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNT 349
Query: 198 MIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQ 257
MI G + I+LF +M +R + + VL+ C+ +D G ++ + R
Sbjct: 350 MISGLSMNGKSRQAIELFRVMIGRRLRPTNVTFVGVLNACSHGGLVDFGFKIFHSMTR-D 408
Query: 258 FDVDVYVA--SVLITMYIKCGELVKG-KLIFDNFASKDIVMWNSIISG---YAQYGLGEK 311
+ V+ + ++ + + G L + LI + D +M +++S + LGE+
Sbjct: 409 YGVEPQIEHYGCMVDLLGRVGRLEEAYDLIRTMKMTPDHIMLGTLLSACKMHKNLELGEQ 468
Query: 312 SLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMK 355
KV + + D T V + + +GK KE ++ MK
Sbjct: 469 VAKVLEDRGQA----DSGTYVLLSHVYASSGKWKEAAQVRAKMK 508
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 136/295 (46%), Gaps = 24/295 (8%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MPE +VV+ T M+ Y ++G++ EAG +F ++ K+ V WT M+ GF+R+ ++ A F
Sbjct: 208 MPE-DVVASTVMISSYSDQGLVEEAGAVFSRVRRKDTVCWTAMIDGFVRNEEMNRALEAF 266
Query: 61 DMMPEKDVVAQTNM---VLGYC-QDGRVDEGREIFDEMPK----KNVISWTTMISGYVNN 112
M ++V VL C Q G ++ GR + M K N+ +I+ Y
Sbjct: 267 RGMQGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFEIELNLFVGNALINMYSRC 326
Query: 113 NRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGL- 171
ID A+ +F+ M +++ +++ M+ G + G+ + A ELF+ M + + +N +G+
Sbjct: 327 GSIDEAQTVFDEMKDRDVITYNTMISGLSMNGKSRQAIELFRVMIGRRLRPTNVTFVGVL 386
Query: 172 ---GQNGEVQKARVVFDQMR-----EKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGV 223
G V +F M E + M+ + R G E DL M+
Sbjct: 387 NACSHGGLVDFGFKIFHSMTRDYGVEPQIEHYGCMVDLLGRVGRLEEAYDLIRTMKMTPD 446
Query: 224 RVNFPSLISVLSVCASLASLDHGRQVHAQLV-RCQFDVDVYVASVLITMYIKCGE 277
+ +L LS C +L+ G QV L R Q D YV +L +Y G+
Sbjct: 447 HIMLGTL---LSACKMHKNLELGEQVAKVLEDRGQADSGTYV--LLSHVYASSGK 496
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 72/148 (48%), Gaps = 11/148 (7%)
Query: 249 VHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGL 308
+HAQL+R D ++ L+ KC + IF + ++ ++ ++I G+ G
Sbjct: 68 IHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASRIFQYTHNPNVYLYTALIDGFVSSGN 127
Query: 309 GEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFE-----SMKSKYLVEPK 363
+++++ M ++PD+ + +L AC ++EGRE+ + S LV +
Sbjct: 128 YFDAIQLYSRMLHDSILPDNYLMASILKACGSQLALREGREVHSRALKLGLSSNRLVRLR 187
Query: 364 TEHYACMVDLLGRAGQVEDAMKLIEAMP 391
+++L G+ G++ DA ++ E MP
Sbjct: 188 ------IMELYGKCGELGDARRVFEEMP 209
>gi|115485519|ref|NP_001067903.1| Os11g0482400 [Oryza sativa Japonica Group]
gi|77550880|gb|ABA93677.1| PPR986-12, putative, expressed [Oryza sativa Japonica Group]
gi|113645125|dbj|BAF28266.1| Os11g0482400 [Oryza sativa Japonica Group]
Length = 770
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 226/635 (35%), Positives = 350/635 (55%), Gaps = 43/635 (6%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIR----DSRIDDA 56
MPERNVV+WTA+V GY +F +M E LG + +D
Sbjct: 139 MPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNACLASCDVDLG 198
Query: 57 RRLFDMMPEKDVVAQTNMVLGYC----QDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+++ + + T+M C + G +D F +P+KNVI+WTTMIS +
Sbjct: 199 KQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITWTTMISACAED 258
Query: 113 NR-IDVARKLF------EVMPEKNEVSWTAMLMGYTQCGRIQD--------AWELFKAMP 157
+++ LF VMP NE + T+++ + CG D A+
Sbjct: 259 EECVELGMSLFIDMLMDGVMP--NEFTLTSVM---SLCGTRLDLNLGKQVQAFSFKIGCE 313
Query: 158 MKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVY-----------ERKG 206
V +++M L L + GE +A +F+QM + TW+ MI Y + +
Sbjct: 314 TNLPVKNSTMYLYL-RKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDLQARS 372
Query: 207 YELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVAS 266
+ + +F +++ ++ + + S+LSVC+++ +L+ G Q+HAQ ++ F DV V S
Sbjct: 373 RGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNS 432
Query: 267 VLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMP 326
L+ MY KCG + F ++ V W S+ISGY+Q+G ++++++F EM +GV P
Sbjct: 433 ALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGVRP 492
Query: 327 DDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKL 386
+++T V +LSACSY G V+E F+ MK +Y +EP +HY CM+D+ R G+VEDA
Sbjct: 493 NEITFVSLLSACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVEDAFSF 552
Query: 387 IEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRF 446
I+ FEP+ IW SL+ CR+H ++LA AA KLL+L+PK YILL N+Y S R+
Sbjct: 553 IKRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADKLLELKPKGIETYILLLNMYISTERW 612
Query: 447 HDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLRE 506
DVA +RK M++ +V SWI ++ KV+ F D +HP+ + ++LE + +
Sbjct: 613 QDVARVRKLMKQEDVGILRDRSWITIKDKVYFFRAND-RTHPQATELYQLLENLLEKAKA 671
Query: 507 AGYCPDSSFVLHDVDEEEK--VHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCH 564
GY P + L D +++EK SL++HSE+LAVA GL++ P G +RV KN+ +C DCH
Sbjct: 672 IGYEPYQNAELSDSEDDEKPAAGSLKHHSERLAVALGLLQTPPGATVRVTKNITMCRDCH 731
Query: 565 SAIKLISKVMGREIILRDANRFHHFKDGLCSCRDY 599
S+IKL S + REII+RD+ R H FKDG CSC D+
Sbjct: 732 SSIKLFSLLENREIIVRDSKRLHKFKDGRCSCGDF 766
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 90/364 (24%), Positives = 170/364 (46%), Gaps = 24/364 (6%)
Query: 67 DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMP 126
D+ T++V Y + + R +FD MP++NV++WT +++GY N++ + ++F M
Sbjct: 112 DMFVATSLVNAYMRCSAARDARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEML 171
Query: 127 EKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQN--------GEVQ 178
E L +L K + ++ I +G + G +
Sbjct: 172 EMGRYPSHYTLGATLNACLASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLD 231
Query: 179 KARVVFDQMREKDDATWSGMIKVYERKGYELEV-IDLFTLMQKEGVRVNFPSLISVLSVC 237
A F ++ EK+ TW+ MI +E+ + LF M +GV N +L SV+S+C
Sbjct: 232 SALRAFWRIPEKNVITWTTMISACAEDEECVELGMSLFIDMLMDGVMPNEFTLTSVMSLC 291
Query: 238 ASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWN 297
+ L+ G+QV A + + ++ V + + +Y++ GE + +F+ I+ WN
Sbjct: 292 GTRLDLNLGKQVQAFSFKIGCETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWN 351
Query: 298 SIISGYAQY-----------GLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKE 346
++ISGYAQ G ++L +F ++ S + PD T +LS CS +++
Sbjct: 352 AMISGYAQIMDSAKDDLQARSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQ 411
Query: 347 GREIF-ESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
G +I +++KS +L + + +V++ + G ++DA K MP + W S++
Sbjct: 412 GEQIHAQTIKSGFLSDVVVN--SALVNMYNKCGCIQDANKAFLEMPTRT-FVTWTSMISG 468
Query: 406 CRTH 409
H
Sbjct: 469 YSQH 472
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 92/198 (46%), Gaps = 3/198 (1%)
Query: 209 LEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVL 268
L+V + T++ EG V + +L C SL R VH + + D++VA+ L
Sbjct: 61 LDVQEAMTML-TEGKAVQSAMYVPLLHRCVETGSLGAARAVHGHMAKTGASADMFVATSL 119
Query: 269 ITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDD 328
+ Y++C + +FD +++V W ++++GY L+VF EM G P
Sbjct: 120 VNAYMRCSAARDARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSH 179
Query: 329 VTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIE 388
TL L+AC + V G+++ KY E T + L + G ++ A++
Sbjct: 180 YTLGATLNACLASCDVDLGKQV-HGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFW 238
Query: 389 AMPFEPDAIIWGSLLGAC 406
+P E + I W +++ AC
Sbjct: 239 RIP-EKNVITWTTMISAC 255
>gi|357450795|ref|XP_003595674.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355484722|gb|AES65925.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 975
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 217/617 (35%), Positives = 344/617 (55%), Gaps = 21/617 (3%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLF--WQMPEKNVVSWTVMLG---------GFIRDS 51
E+NV+SW +M+ GY ++ A L QM +K V+ +L F++
Sbjct: 361 EKNVISWNSMIGGYSKDRDFRGAFELLRKMQMEDKVKVNEVTLLNVLPVCEEEIQFLKLK 420
Query: 52 RIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVN 111
I + ++VA V GY + G + +F M K V SW +I G+V
Sbjct: 421 EIHGYALRHGFIQSDELVANA-FVAGYAKCGSLHYAEGVFCGMESKMVSSWNALIGGHVQ 479
Query: 112 NNRIDVARKLFEVMP----EKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSM 167
N A L+ +M E + + ++L + + E+ +M +
Sbjct: 480 NGFPRKALDLYLLMRGSGLEPDLFTIASLLSACARLKSLSCGKEIHGSMLRNGFELDEFI 539
Query: 168 ILGLG----QNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGV 223
+ L Q G++ A++ FD M EK+ W+ MI + + + + +D+F M +
Sbjct: 540 CISLVSLYVQCGKILLAKLFFDNMEEKNLVCWNTMINGFSQNEFPFDALDMFHQMLSSKI 599
Query: 224 RVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKL 283
+ S+I L C+ +++L G+++H V+ +V LI MY KCG + + +
Sbjct: 600 WPDEISIIGALGACSQVSALRLGKELHCFAVKSHLTEHSFVTCSLIDMYAKCGCMEQSQN 659
Query: 284 IFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGK 343
IFD K V WN +I+GY +G G K++++F M ++G PD VT + +L+AC++ G
Sbjct: 660 IFDRVHLKGEVTWNVLITGYGIHGHGRKAIELFKSMQNAGFRPDSVTFIALLTACNHAGL 719
Query: 344 VKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
V EG E M+S + ++PK EHYAC+VD+LGRAG++ +A++L+ +P +PD+ IW SLL
Sbjct: 720 VAEGLEYLGQMQSLFGIKPKLEHYACVVDMLGRAGRLNEALELVNELPDKPDSRIWSSLL 779
Query: 404 GACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIK 463
+CR + LD+ E A KLL+L P A Y+L+SN YA G++ +V ++R+ M++ + K
Sbjct: 780 SSCRNYRDLDIGEKVANKLLELGPDKAENYVLISNFYARLGKWDEVRKMRQRMKEIGLQK 839
Query: 464 PPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEE 523
GCSWIE+ KV F D S + I + ++ + + GY PD+S VLH+++E+
Sbjct: 840 DAGCSWIEIGGKVSRFLVGD-ESLLQSMKIQQTWIELEKKINKIGYKPDTSCVLHELEED 898
Query: 524 EKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDA 583
EK+ LR HSEKLA+++GL+ +G +RV KNLR+C DCH+AIKL+SK+ REII+RD
Sbjct: 899 EKIKILRNHSEKLAISFGLLNTAKGTTLRVCKNLRICVDCHNAIKLVSKIDKREIIVRDN 958
Query: 584 NRFHHFKDGLCSCRDYW 600
RFHHFK+G CSC DYW
Sbjct: 959 KRFHHFKNGFCSCGDYW 975
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 104/425 (24%), Positives = 198/425 (46%), Gaps = 28/425 (6%)
Query: 4 RNVVSWTAMVRGYVEEGMITEAGTLFWQM-------PEKNVVSWTVMLGGFIRDSRIDDA 56
+N+ W A++ GY+ + +A +F +M P+ + + + D R+ +A
Sbjct: 158 KNLFLWNALLSGYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKACVGVYDVRLGEA 217
Query: 57 RRLFDMMPE--KDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNR 114
F + + DV ++ Y + G V+ ++FD+MP++N++SW +++ + N
Sbjct: 218 VHGFALKTKVLSDVFVGNALIAMYGKFGFVESAVKVFDKMPQRNLVSWNSVMYACLENGV 277
Query: 115 IDVARKLFEVMPEKNE---VSWTAMLMGYTQCGRIQDA--WELFKAMPMK-----SVVAS 164
+ + LF+ + +E M+ C R + +F + +K + +
Sbjct: 278 FEESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQGEVRLGMVFHGLALKLGLCGELKVN 337
Query: 165 NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEG-V 223
+S++ + G + +ARV+FD EK+ +W+ MI Y + +L MQ E V
Sbjct: 338 SSLLDMYSKCGYLCEARVLFDT-NEKNVISWNSMIGGYSKDRDFRGAFELLRKMQMEDKV 396
Query: 224 RVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQF-DVDVYVASVLITMYIKCGELVKGK 282
+VN +L++VL VC +++H +R F D VA+ + Y KCG L +
Sbjct: 397 KVNEVTLLNVLPVCEEEIQFLKLKEIHGYALRHGFIQSDELVANAFVAGYAKCGSLHYAE 456
Query: 283 LIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTG 342
+F SK + WN++I G+ Q G K+L ++ M SG+ PD T+ +LSAC+
Sbjct: 457 GVFCGMESKMVSSWNALIGGHVQNGFPRKALDLYLLMRGSGLEPDLFTIASLLSACARLK 516
Query: 343 KVKEGREIFESMKSKYLVEPKTEHYAC--MVDLLGRAGQVEDAMKLIEAMPFEPDAIIWG 400
+ G+EI SM + + + C +V L + G++ A + M E + + W
Sbjct: 517 SLSCGKEIHGSMLRNGF---ELDEFICISLVSLYVQCGKILLAKLFFDNME-EKNLVCWN 572
Query: 401 SLLGA 405
+++
Sbjct: 573 TMING 577
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 133/286 (46%), Gaps = 13/286 (4%)
Query: 65 EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLF-- 122
+ DVV T +V Y + +F+ +KN+ W ++SGY+ N+ A +F
Sbjct: 126 QNDVVLITRLVTMYSICDSPYDSCLVFNASRRKNLFLWNALLSGYLRNSLFRDAVFVFVE 185
Query: 123 -----EVMPEKNEVSWTAMLMGYTQCGRIQDAWELF--KAMPMKSVVASNSMILGLGQNG 175
E +P+ + R+ +A F K + V N++I G+ G
Sbjct: 186 MISLTEFVPDNFTLPCVIKACVGVYDVRLGEAVHGFALKTKVLSDVFVGNALIAMYGKFG 245
Query: 176 EVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFT--LMQKEGVRVNFPSLISV 233
V+ A VFD+M +++ +W+ ++ G E LF L EG+ + ++++V
Sbjct: 246 FVESAVKVFDKMPQRNLVSWNSVMYACLENGVFEESYGLFKGLLNGDEGLMPDVATMVTV 305
Query: 234 LSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDI 293
+ +CA + G H ++ ++ V S L+ MY KCG L + +++FD K++
Sbjct: 306 IPLCARQGEVRLGMVFHGLALKLGLCGELKVNSSLLDMYSKCGYLCEARVLFDT-NEKNV 364
Query: 294 VMWNSIISGYAQYGLGEKSLKVFHEM-FSSGVMPDDVTLVGVLSAC 338
+ WNS+I GY++ + ++ +M V ++VTL+ VL C
Sbjct: 365 ISWNSMIGGYSKDRDFRGAFELLRKMQMEDKVKVNEVTLLNVLPVC 410
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 85/375 (22%), Positives = 170/375 (45%), Gaps = 23/375 (6%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMP----EKNVVSWTVMLGGFIRDSRIDDA 56
M + V SW A++ G+V+ G +A L+ M E ++ + +L R +
Sbjct: 462 MESKMVSSWNALIGGHVQNGFPRKALDLYLLMRGSGLEPDLFTIASLLSACARLKSLSCG 521
Query: 57 RRLFDMMP----EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+ + M E D ++V Y Q G++ + FD M +KN++ W TMI+G+ N
Sbjct: 522 KEIHGSMLRNGFELDEFICISLVSLYVQCGKILLAKLFFDNMEEKNLVCWNTMINGFSQN 581
Query: 113 ----NRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWEL----FKAMPMKSVVAS 164
+ +D+ ++ +E+S L +Q ++ EL K+ + +
Sbjct: 582 EFPFDALDMFHQMLSSKIWPDEISIIGALGACSQVSALRLGKELHCFAVKSHLTEHSFVT 641
Query: 165 NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVR 224
S+I + G +++++ +FD++ K + TW+ +I Y G+ + I+LF MQ G R
Sbjct: 642 CSLIDMYAKCGCMEQSQNIFDRVHLKGEVTWNVLITGYGIHGHGRKAIELFKSMQNAGFR 701
Query: 225 VNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVA--SVLITMYIKCGELVKGK 282
+ + I++L+ C + G + Q+ + F + + + ++ M + G L +
Sbjct: 702 PDSVTFIALLTACNHAGLVAEGLEYLGQM-QSLFGIKPKLEHYACVVDMLGRAGRLNEAL 760
Query: 283 LIFDNFASK-DIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDV-TLVGVLSACSY 340
+ + K D +W+S++S Y + KV +++ G PD V + + +
Sbjct: 761 ELVNELPDKPDSRIWSSLLSSCRNYRDLDIGEKVANKLLELG--PDKAENYVLISNFYAR 818
Query: 341 TGKVKEGREIFESMK 355
GK E R++ + MK
Sbjct: 819 LGKWDEVRKMRQRMK 833
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 113/228 (49%), Gaps = 8/228 (3%)
Query: 182 VVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLM--QKEGVRVNFPSLISVLSVCAS 239
+VF+ R K+ W+ ++ Y R + + +F M E V NF +L V+ C
Sbjct: 150 LVFNASRRKNLFLWNALLSGYLRNSLFRDAVFVFVEMISLTEFVPDNF-TLPCVIKACVG 208
Query: 240 LASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSI 299
+ + G VH ++ + DV+V + LI MY K G + +FD +++V WNS+
Sbjct: 209 VYDVRLGEAVHGFALKTKVLSDVFVGNALIAMYGKFGFVESAVKVFDKMPQRNLVSWNSV 268
Query: 300 ISGYAQYGLGEKSLKVFHEMFSS--GVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSK 357
+ + G+ E+S +F + + G+MPD T+V V+ C+ G+V+ G +F + K
Sbjct: 269 MYACLENGVFEESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQGEVRLGM-VFHGLALK 327
Query: 358 YLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
+ + + + ++D+ + G + +A L + E + I W S++G
Sbjct: 328 LGLCGELKVNSSLLDMYSKCGYLCEARVLFDTN--EKNVISWNSMIGG 373
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 96/177 (54%), Gaps = 6/177 (3%)
Query: 233 VLSVCASLASLDHGRQVHAQLVRC-QFDVDVYVASVLITMYIKCGELVKGKLIFDNFASK 291
+L +C +++ GR++H + F DV + + L+TMY C L+F+ K
Sbjct: 99 LLQLCGEYKNIEIGRKIHNFISTSPHFQNDVVLITRLVTMYSICDSPYDSCLVFNASRRK 158
Query: 292 DIVMWNSIISGYAQYGLGEKSLKVFHEMFS-SGVMPDDVTLVGVLSACSYTGKVKEGREI 350
++ +WN+++SGY + L ++ VF EM S + +PD+ TL V+ AC V+ G +
Sbjct: 159 NLFLWNALLSGYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKACVGVYDVRLGEAV 218
Query: 351 FE-SMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGAC 406
++K+K L + + ++ + G+ G VE A+K+ + MP + + + W S++ AC
Sbjct: 219 HGFALKTKVLSDVFVGN--ALIAMYGKFGFVESAVKVFDKMP-QRNLVSWNSVMYAC 272
>gi|16905194|gb|AAL31064.1|AC090120_10 hypothetical protein [Oryza sativa Japonica Group]
gi|31432781|gb|AAP54374.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 698
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 222/622 (35%), Positives = 340/622 (54%), Gaps = 27/622 (4%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MP RN VSWT +V G + M +A F M V L R + A
Sbjct: 82 MPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRFALSSAARAAAALGAPLPG 141
Query: 61 DMMP--------EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+ + ++ +N+ Y + G + E +FD+MP+K+ ++WT MI GY N
Sbjct: 142 AQLHCVGVRLGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKN 201
Query: 113 NRIDVARKLFEVMPEKNEVSWTAMLMG--YTQCGRIQDAWE-------LFKAMPMKSVVA 163
++ A F M + V + + G ++D W + KA V
Sbjct: 202 GSLEAAVLSFRDMKREGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVAV 261
Query: 164 SNSMILGLGQNGEVQKARVVFDQMREKDDATW-----SGMIKVYERKGYELEVIDLFTLM 218
N++I ++ +V+ A V + D W + MI Y E + ++ +
Sbjct: 262 RNALIDMYAKSMDVESASRVL----KIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVEL 317
Query: 219 QKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGEL 278
+++GV N + S++ CA A L+ G Q+HAQ+++ D +V S L+ MY KCG +
Sbjct: 318 RRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLI 377
Query: 279 VKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSAC 338
+F+ + + WN++I+ +AQ+G G ++++ F M SG+ P+ + V +L+AC
Sbjct: 378 SLSMQLFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTAC 437
Query: 339 SYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAII 398
S+ G V EG + F SMK + +EPK EHY+C++D GRAG++++A K I MP +P+A
Sbjct: 438 SHAGLVDEGLKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPIKPNAYG 497
Query: 399 WGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRK 458
W SLLGACR +L EVAA+ L++LEP N G ++ LS IYAS G++ DV +RK MR
Sbjct: 498 WCSLLGACRMRGSKELGEVAAQNLMKLEPGNTGIHVSLSGIYASLGQWEDVKAVRKLMRD 557
Query: 459 RNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLH 518
+ K PG SW++ KK H+F D SHP+ I LE++ ++E GY PD+SF+
Sbjct: 558 SRIKKLPGFSWVDSNKKTHVFGSED-WSHPQQKDIYEKLEELTTRIKEEGYIPDTSFLPC 616
Query: 519 DVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREI 578
++++ K LRYHSE++AVA+ L+ +P PI V KNLR+C DCH+A K I KV R+I
Sbjct: 617 NLEDIAKERILRYHSERIAVAFALISMPATKPIIVKKNLRICIDCHTAFKFICKVERRDI 676
Query: 579 ILRDANRFHHFKDGLCSCRDYW 600
I+RD +RFHHF +G CSC DYW
Sbjct: 677 IVRDNSRFHHFVNGRCSCGDYW 698
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 115/251 (45%), Gaps = 6/251 (2%)
Query: 144 GRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYE 203
GR+ A + S +N +I ++ A +F M ++ +W+ ++
Sbjct: 39 GRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALRLFAAMPRRNAVSWTTLVSGLS 98
Query: 204 RKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVY 263
+ + + F M++ GV +L S A+L + G Q+H VR FD +++
Sbjct: 99 QNLMHADALAAFAAMRRAGVAPTRFALSSAARAAAALGAPLPGAQLHCVGVRLGFDTELF 158
Query: 264 VASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSG 323
VAS L MY KCG L + +FD KD V W ++I GYA+ G E ++ F +M G
Sbjct: 159 VASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNGSLEAAVLSFRDMKREG 218
Query: 324 VM-PDDVTLVGVLSACSYTGKVKEG--REIFESMKSKYLVEPKTEHYACMVDLLGRAGQV 380
++ D VLSA +G +K+G + +K E + ++D+ ++ V
Sbjct: 219 LVGADQHVFCSVLSA---SGGLKDGWLSKSIHCCVTKAGFELEVAVRNALIDMYAKSMDV 275
Query: 381 EDAMKLIEAMP 391
E A ++++ P
Sbjct: 276 ESASRVLKIDP 286
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 98/216 (45%), Gaps = 3/216 (1%)
Query: 230 LISVLSVCASLASLDHGRQVHAQLVRC-QFDVDVYVASVLITMYIKCGELVKGKLIFDNF 288
L S+L C L GR +HA+LV ++A+ LITMY C +L +F
Sbjct: 23 LASLLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALRLFAAM 82
Query: 289 ASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGR 348
++ V W +++SG +Q + +L F M +GV P L A + G G
Sbjct: 83 PRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRFALSSAARAAAALGAPLPGA 142
Query: 349 EIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRT 408
++ + + + + + + D+ + G + +A ++ + MP + DA+ W +++
Sbjct: 143 QL-HCVGVRLGFDTELFVASNLADMYSKCGLLSEACRVFDQMP-QKDAVAWTAMIDGYAK 200
Query: 409 HMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQG 444
+ L+ A ++ + + + A ++ S + AS G
Sbjct: 201 NGSLEAAVLSFRDMKREGLVGADQHVFCSVLSASGG 236
>gi|449491572|ref|XP_004158941.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 1004
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 213/641 (33%), Positives = 339/641 (52%), Gaps = 48/641 (7%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDM 62
E N +V Y + G+ +A +F + + ++V W+ ++ + + +++ +LF +
Sbjct: 346 EGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHL 405
Query: 63 MPEKDVVAQ----TNMVLGYCQDGRVDEGREIFDEMPK----KNVISWTTMISGYVNNNR 114
M D + +++ G + G+ I + K +V +++ Y+ N
Sbjct: 406 MRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGC 465
Query: 115 IDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAM----------PMKSVVAS 164
+ KL+E M +++ +SW A L G CG +F M S++ S
Sbjct: 466 VHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGS 525
Query: 165 NSMILGLGQNGEV-----------------------------QKARVVFDQMREKDDATW 195
S + + +V + A V F+++ +D TW
Sbjct: 526 CSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTW 585
Query: 196 SGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVR 255
+ +I Y + + ++ F MQ+EGV+ N +L LS C+SLASL+ G+Q+H+ + +
Sbjct: 586 TVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFK 645
Query: 256 CQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKV 315
D++V S L+ MY KCG + + + +F+ +D + WN+II GYAQ G G K+L
Sbjct: 646 SGHVSDMFVGSALVDMYAKCGCMEEAEALFEALIRRDTIAWNTIICGYAQNGQGNKALTA 705
Query: 316 FHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLG 375
F M G+ PD VT G+LSACS+ G V+EG+E F SM + + P +H ACMVD+LG
Sbjct: 706 FRMMLDEGISPDGVTFTGILSACSHQGLVEEGKEHFNSMYRDFGISPTVDHCACMVDILG 765
Query: 376 RAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYIL 435
R G+ ++ I+ M +A+IW ++LGA + H L L E AA KL +L+P+ YIL
Sbjct: 766 RVGKFDELEDFIQKMQLSQNALIWETVLGASKMHNNLVLGEKAANKLFELQPEEESSYIL 825
Query: 436 LSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMR 495
LSNI+A++GR+ DV +R M + V K PGCSW+E +VH F D SHP+ I
Sbjct: 826 LSNIFATEGRWDDVKRVRSLMSSKGVKKEPGCSWVEANGQVHTFVSHD-YSHPQIQEIHL 884
Query: 496 MLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMK 555
L+++ L Y P + +VLH+V E EK +LR+HSE+LA+ + L+ IR+ K
Sbjct: 885 KLDELDRELASIQYVPKTEYVLHNVGETEKKENLRFHSERLALGFALISTSSEKKIRIFK 944
Query: 556 NLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSC 596
NLR+C DCH +K IS + +EI++RD RFHHFK+G CSC
Sbjct: 945 NLRICRDCHDVMKHISSITNQEIVVRDVRRFHHFKNGACSC 985
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 104/403 (25%), Positives = 199/403 (49%), Gaps = 25/403 (6%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MP+R+VVSWTA+++G V EG ++ LF +M + ++ L ++ + A L
Sbjct: 173 MPDRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLG 232
Query: 61 DMMPEK--------DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
M + D+ + +V Y + G ++ ++F MP++N ++W +++GY
Sbjct: 233 KQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQR 292
Query: 113 NRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMI 168
+ KLF M E NE + T +L G ++ ++ ++ +K N I
Sbjct: 293 GDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQG-QVIHSLIIKCGYEGNEFI 351
Query: 169 LGLG------QNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEG 222
G G + G A VF +++ D WS +I +++G E I LF LM+
Sbjct: 352 -GCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGD 410
Query: 223 VRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGK 282
N ++ S+LS + +L +G+ +HA + + F+ DV V++ L+TMY+K G + G
Sbjct: 411 TLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGT 470
Query: 283 LIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTG 342
++++ +D++ WN+ +SG G+ ++ L +F+ M G +P+ T + +L +CS
Sbjct: 471 KLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLF 530
Query: 343 KVKEGREIFESMKSKYLVEPKTEHYAC--MVDLLGRAGQVEDA 383
V GR++ + L + ++ C ++D+ + +EDA
Sbjct: 531 DVHYGRQVHAHIIKNQLDD---NNFVCTALIDMYAKCMYLEDA 570
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 90/327 (27%), Positives = 165/327 (50%), Gaps = 10/327 (3%)
Query: 87 GREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEK----NEVSWTAMLMGYTQ 142
R + +MP ++V+SWT +I G V + + LF+ M + NE + L +
Sbjct: 166 ARLVLAKMPDRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSL 225
Query: 143 CGRI----QDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGM 198
C + Q + FK + + ++++ + GE++ A +F M E++D TW+ +
Sbjct: 226 CMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVL 285
Query: 199 IKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQF 258
+ Y ++G V+ LF M + V+ N +L +VL CA+ +L G+ +H+ +++C +
Sbjct: 286 LNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGY 345
Query: 259 DVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHE 318
+ + ++ L+ MY KCG + +F DIV+W+++I+ Q G E+S+K+FH
Sbjct: 346 EGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHL 405
Query: 319 MFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAG 378
M +P+ T+ +LSA + TG ++ G+ I + KY E +V + + G
Sbjct: 406 MRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVW-KYGFETDVAVSNALVTMYMKNG 464
Query: 379 QVEDAMKLIEAMPFEPDAIIWGSLLGA 405
V D KL E+M + D I W + L
Sbjct: 465 CVHDGTKLYESM-VDRDLISWNAYLSG 490
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 88/175 (50%), Gaps = 4/175 (2%)
Query: 232 SVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASK 291
S+L CAS SL + +H +V+ + D ++ L+ +Y KC +L+ +
Sbjct: 117 SMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMPDR 176
Query: 292 DIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIF 351
D+V W ++I G G S+ +F EM + G+MP++ TL L ACS + G+++
Sbjct: 177 DVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQMH 236
Query: 352 -ESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
++ K L++ + +VDL + G++E A K+ MP E + + W LL
Sbjct: 237 AQAFKLGLLLDLFVG--SALVDLYAKCGEIELASKMFIGMP-EQNDVTWNVLLNG 288
>gi|125534384|gb|EAY80932.1| hypothetical protein OsI_36110 [Oryza sativa Indica Group]
Length = 770
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 226/635 (35%), Positives = 350/635 (55%), Gaps = 43/635 (6%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIR----DSRIDDA 56
MPERNVV+WTA+V GY +F +M E LG + +D
Sbjct: 139 MPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNACLASCDVDLG 198
Query: 57 RRLFDMMPEKDVVAQTNMVLGYC----QDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+++ + + T+M C + G +D F +P+KNVI+WTTMIS +
Sbjct: 199 KQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITWTTMISACAED 258
Query: 113 NR-IDVARKLF------EVMPEKNEVSWTAMLMGYTQCGRIQD--------AWELFKAMP 157
+++ LF VMP NE + T+++ + CG D A+
Sbjct: 259 EECVELGLSLFIDMLMDGVMP--NEFTLTSVM---SLCGTRLDLNLGKQVQAFSFKIGCE 313
Query: 158 MKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVY-----------ERKG 206
V +++M L L + GE +A +F+QM + TW+ MI Y + +
Sbjct: 314 TNLPVKNSTMYLYL-RKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDLQARS 372
Query: 207 YELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVAS 266
+ + +F +++ ++ + + S+LSVC+++ +L+ G Q+HAQ ++ F DV V S
Sbjct: 373 RGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNS 432
Query: 267 VLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMP 326
L+ MY KCG + F ++ V W S+ISGY+Q+G ++++++F EM +GV P
Sbjct: 433 ALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGVRP 492
Query: 327 DDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKL 386
+++T V +LSACSY G V+E F+ MK +Y +EP +HY CM+D+ R G+VEDA
Sbjct: 493 NEITFVSLLSACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVEDAFSF 552
Query: 387 IEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRF 446
I+ FEP+ IW SL+ CR+H ++LA AA KLL+L+PK YILL N+Y S R+
Sbjct: 553 IKRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADKLLELKPKGIETYILLLNMYISTERW 612
Query: 447 HDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLRE 506
DVA +RK M++ +V SWI ++ KV+ F D +HP+ + ++LE + +
Sbjct: 613 QDVARVRKLMKQEDVGILRDRSWITIKDKVYFFRAND-RTHPQATELYQLLENLLEKAKA 671
Query: 507 AGYCPDSSFVLHDVDEEEK--VHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCH 564
GY P + L D +++EK SL++HSE+LAVA GL++ P G +RV KN+ +C DCH
Sbjct: 672 IGYEPYQNAELSDSEDDEKPAAGSLKHHSERLAVALGLLQTPPGATVRVTKNITMCRDCH 731
Query: 565 SAIKLISKVMGREIILRDANRFHHFKDGLCSCRDY 599
S+IKL S + REII+RD+ R H FKDG CSC D+
Sbjct: 732 SSIKLFSLLENREIIVRDSKRLHKFKDGRCSCGDF 766
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 91/364 (25%), Positives = 171/364 (46%), Gaps = 24/364 (6%)
Query: 67 DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMP 126
D+ T++V Y + G + R +FD MP++NV++WT +++GY N++ + ++F M
Sbjct: 112 DMFVATSLVNAYMRCGAARDARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEML 171
Query: 127 EKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQN--------GEVQ 178
E L +L K + ++ I +G + G +
Sbjct: 172 EMGRYPSHYTLGATLNACLASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLD 231
Query: 179 KARVVFDQMREKDDATWSGMIKVYERKGYELEV-IDLFTLMQKEGVRVNFPSLISVLSVC 237
A F ++ EK+ TW+ MI +E+ + LF M +GV N +L SV+S+C
Sbjct: 232 SALRAFWRIPEKNVITWTTMISACAEDEECVELGLSLFIDMLMDGVMPNEFTLTSVMSLC 291
Query: 238 ASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWN 297
+ L+ G+QV A + + ++ V + + +Y++ GE + +F+ I+ WN
Sbjct: 292 GTRLDLNLGKQVQAFSFKIGCETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWN 351
Query: 298 SIISGYAQY-----------GLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKE 346
++ISGYAQ G ++L +F ++ S + PD T +LS CS +++
Sbjct: 352 AMISGYAQIMDSAKDDLQARSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQ 411
Query: 347 GREIF-ESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
G +I +++KS +L + + +V++ + G ++DA K MP + W S++
Sbjct: 412 GEQIHAQTIKSGFLSDVVVN--SALVNMYNKCGCIQDANKAFLEMPTRT-FVTWTSMISG 468
Query: 406 CRTH 409
H
Sbjct: 469 YSQH 472
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 94/198 (47%), Gaps = 3/198 (1%)
Query: 209 LEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVL 268
L+V + T++ EG V + +L C + SL R VH + + D++VA+ L
Sbjct: 61 LDVQEAMTML-TEGKAVQSAMYVPLLHRCVEMGSLGAARAVHGHMAKTGAGADMFVATSL 119
Query: 269 ITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDD 328
+ Y++CG + +FD +++V W ++++GY L+VF EM G P
Sbjct: 120 VNAYMRCGAARDARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSH 179
Query: 329 VTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIE 388
TL L+AC + V G+++ KY E T + L + G ++ A++
Sbjct: 180 YTLGATLNACLASCDVDLGKQV-HGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFW 238
Query: 389 AMPFEPDAIIWGSLLGAC 406
+P E + I W +++ AC
Sbjct: 239 RIP-EKNVITWTTMISAC 255
>gi|449468588|ref|XP_004152003.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 558
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 205/522 (39%), Positives = 305/522 (58%), Gaps = 12/522 (2%)
Query: 87 GREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEK-NEVSWTAMLMGYT--QC 143
R +F +P + I++ T+I + +R + LF + N + + C
Sbjct: 41 ARYVFSRIPSPDTIAYNTIIRSH---SRFFPSHSLFYFFSMRSNGIPLDNFTFPFVLKAC 97
Query: 144 GRIQDAWELFKAMPM----KSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMI 199
R+Q L + + N++I G G ++ A VFD+M E+D +WS +I
Sbjct: 98 SRLQINLHLHSLIVKYGLDSDIFVQNALICVYGYCGSLEMAVKVFDEMSERDSVSWSTVI 157
Query: 200 KVYERKGYELEVIDLFTLMQKEG-VRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQF 258
+ GY E +DLF MQ E V + +++SV+S + L L+ GR V A + R
Sbjct: 158 ASFLNNGYASEALDLFEKMQLEDKVVPDEVTMLSVISAISHLGDLELGRWVRAFIGRLGL 217
Query: 259 DVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHE 318
V V + + LI M+ +CG + + ++F+ A ++++ W ++I+G +G ++L +FH
Sbjct: 218 GVSVALGTALIDMFSRCGSIDESIVVFEKMAVRNVLTWTALINGLGVHGRSTEALAMFHS 277
Query: 319 MFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAG 378
M SGV PD VT GVL ACS+ G VKEG +IFES++ Y ++P +HY CMVD+LGRAG
Sbjct: 278 MRKSGVQPDYVTFSGVLVACSHGGLVKEGWDIFESIRKVYRMDPLLDHYGCMVDILGRAG 337
Query: 379 QVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSN 438
+ +A +E MP +P++IIW +LLGAC H L LAE K+ ++ G +LLSN
Sbjct: 338 LLNEAYDFVERMPMKPNSIIWRTLLGACVNHNNLGLAEKVKAKISKISSSQNGDLVLLSN 397
Query: 439 IYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLE 498
+Y + GR+ + A +R MR++ + K PGCS I V++ +H F D SHP+ I + L
Sbjct: 398 VYGAAGRWVEKASIRSKMREKRIGKEPGCSSINVDQTIHEFVSGDN-SHPQSEDITKFLS 456
Query: 499 KIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLR 558
I G LR GY + VLHD++EEE+ HSL YHSEKLAVA+ ++ + + IR+MKNLR
Sbjct: 457 SIIGDLRNRGYMMQTKNVLHDIEEEEREHSLSYHSEKLAVAFAILSMKDKRTIRIMKNLR 516
Query: 559 VCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
+C DCHS +K IS R+II+RD NRFHHF+ GLCSC DYW
Sbjct: 517 ICYDCHSFMKHISVRFERKIIIRDRNRFHHFEKGLCSCHDYW 558
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 95/187 (50%), Gaps = 17/187 (9%)
Query: 65 EKDVVAQTNM--VLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLF 122
+ D+ Q + V GYC G ++ ++FDEM +++ +SW+T+I+ ++NN A LF
Sbjct: 116 DSDIFVQNALICVYGYC--GSLEMAVKVFDEMSERDSVSWSTVIASFLNNGYASEALDLF 173
Query: 123 EVMPEK-----NEVSWTAMLMGYTQCGRIQ-DAWELFKAMPMK-----SVVASNSMILGL 171
E M + +EV+ +++ + G ++ W +A + SV ++I
Sbjct: 174 EKMQLEDKVVPDEVTMLSVISAISHLGDLELGRW--VRAFIGRLGLGVSVALGTALIDMF 231
Query: 172 GQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLI 231
+ G + ++ VVF++M ++ TW+ +I G E + +F M+K GV+ ++ +
Sbjct: 232 SRCGSIDESIVVFEKMAVRNVLTWTALINGLGVHGRSTEALAMFHSMRKSGVQPDYVTFS 291
Query: 232 SVLSVCA 238
VL C+
Sbjct: 292 GVLVACS 298
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 84/169 (49%), Gaps = 13/169 (7%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLF--WQMPEKNVVSWTVMLGGFIRDSRIDDAR- 57
M ER+ VSW+ ++ ++ G +EA LF Q+ +K V ML S + D
Sbjct: 145 MSERDSVSWSTVIASFLNNGYASEALDLFEKMQLEDKVVPDEVTMLSVISAISHLGDLEL 204
Query: 58 ----RLF--DMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVN 111
R F + V T ++ + + G +DE +F++M +NV++WT +I+G
Sbjct: 205 GRWVRAFIGRLGLGVSVALGTALIDMFSRCGSIDESIVVFEKMAVRNVLTWTALINGLGV 264
Query: 112 NNRIDVARKLFEVMP----EKNEVSWTAMLMGYTQCGRIQDAWELFKAM 156
+ R A +F M + + V+++ +L+ + G +++ W++F+++
Sbjct: 265 HGRSTEALAMFHSMRKSGVQPDYVTFSGVLVACSHGGLVKEGWDIFESI 313
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 68/133 (51%), Gaps = 14/133 (10%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV----VSWTVML-----GGFIRDS 51
M RNV++WTA++ G G TEA +F M + V V+++ +L GG +++
Sbjct: 247 MAVRNVLTWTALINGLGVHGRSTEALAMFHSMRKSGVQPDYVTFSGVLVACSHGGLVKEG 306
Query: 52 --RIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMP-KKNVISWTTMISG 108
+ R+++ M P D +LG + G ++E + + MP K N I W T++
Sbjct: 307 WDIFESIRKVYRMDPLLDHYGCMVDILG--RAGLLNEAYDFVERMPMKPNSIIWRTLLGA 364
Query: 109 YVNNNRIDVARKL 121
VN+N + +A K+
Sbjct: 365 CVNHNNLGLAEKV 377
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 52/267 (19%), Positives = 109/267 (40%), Gaps = 40/267 (14%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMP----E 65
TA++ + G I E+ +F +M +NV++WT ++ G R +A +F M +
Sbjct: 225 TALIDMFSRCGSIDESIVVFEKMAVRNVLTWTALINGLGVHGRSTEALAMFHSMRKSGVQ 284
Query: 66 KDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVM 125
D V + +++ G V EG +IF+ + RK++ +
Sbjct: 285 PDYVTFSGVLVACSHGGLVKEGWDIFESI------------------------RKVYRMD 320
Query: 126 PEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQN----GEVQKAR 181
P + ++G + G + +A++ + MPMK +LG N G +K +
Sbjct: 321 PLLDHYGCMVDILG--RAGLLNEAYDFVERMPMKPNSIIWRTLLGACVNHNNLGLAEKVK 378
Query: 182 VVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLA 241
++ + + VY G +E + + M+++ R+ S ++V ++
Sbjct: 379 AKISKISSSQNGDLVLLSNVYGAAGRWVEKASIRSKMREK--RIGKEPGCSSINVDQTIH 436
Query: 242 SLDHGRQVHAQLVRCQFDVDVYVASVL 268
G H Q D+ +++S++
Sbjct: 437 EFVSGDNSHPQ----SEDITKFLSSII 459
>gi|297800868|ref|XP_002868318.1| hypothetical protein ARALYDRAFT_330113 [Arabidopsis lyrata subsp.
lyrata]
gi|297314154|gb|EFH44577.1| hypothetical protein ARALYDRAFT_330113 [Arabidopsis lyrata subsp.
lyrata]
Length = 1057
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 207/526 (39%), Positives = 313/526 (59%), Gaps = 34/526 (6%)
Query: 76 LGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTA 135
LG + G+ I E +V+ ++++ Y +D A+ +F+ + KN +SWTA
Sbjct: 55 LGSIKLGKQVHCHFIVSEYSNDDVVK-SSLVDMYAKCRLLDCAKAVFDSIRVKNTISWTA 113
Query: 136 MLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATW 195
M+ GY + GR ++A ELF+ +P+K++ + ++I G Q+G+ +A VF +MR +
Sbjct: 114 MVSGYAKSGRKEEALELFRRLPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRE----- 168
Query: 196 SGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVR 255
++++D L S++ CA+LA+ GRQVH ++
Sbjct: 169 ------------RVDILDPLVLS-------------SIVGACANLAASIAGRQVHGLVIA 203
Query: 256 CQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKV 315
FD V++++ LI MY KC +++ K IF +D+V W S+I G AQ+G EK+L +
Sbjct: 204 LGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALAL 263
Query: 316 FHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLG 375
+ EM S GV P++VT VG++ ACS+ G V +GRE+F+SM Y + P +HY C++DLLG
Sbjct: 264 YDEMVSHGVKPNEVTFVGLIYACSHVGFVAKGRELFQSMTKDYGIRPSLQHYTCLLDLLG 323
Query: 376 RAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLL-QLEPKNAGPYI 434
R+G +++A LI MPF PD W +LL AC+ + + A L+ +PK+ YI
Sbjct: 324 RSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGQGQMGVRIADHLVSSFKPKDPSTYI 383
Query: 435 LLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIM 494
LLSNIYAS + V+E R+ + V K PG S +EV K+ +F + SH I
Sbjct: 384 LLSNIYASASLWGKVSEARRKLGDMEVRKDPGYSSVEVRKETEVFYAGE-TSHALKEDIF 442
Query: 495 RMLEKIGGLLR-EAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRV 553
R+L+K+ +R GY PD+S++LHD+DE+EK L +HSE+ AVAYGL+K G PIR+
Sbjct: 443 RLLKKLEEEMRIRNGYVPDTSWILHDMDEQEKEKLLFWHSERSAVAYGLLKAVPGTPIRI 502
Query: 554 MKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDY 599
+KNLRVCGDCH +K IS++ REII+RDA R+HHFK G CSC D+
Sbjct: 503 VKNLRVCGDCHVVLKHISEITEREIIVRDATRYHHFKGGKCSCNDF 548
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 89/413 (21%), Positives = 174/413 (42%), Gaps = 62/413 (15%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM----------PEKNVVSWTVMLGGFIRD 50
MP R+ ++W +++ + + +G W P+ V S V +
Sbjct: 1 MPHRDHIAWASVLTALNQANL---SGKTLWVFSSVGSSSGLRPDDFVFSALVKACANLGS 57
Query: 51 SRIDDARRLFDMMPE--KDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISG 108
++ ++ E D V ++++V Y + +D + +FD + KN ISWT M+SG
Sbjct: 58 IKLGKQVHCHFIVSEYSNDDVVKSSLVDMYAKCRLLDCAKAVFDSIRVKNTISWTAMVSG 117
Query: 109 YVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAM---------PM- 158
Y + R + A +LF +P KN SWTA++ G+ Q G+ +A+ +F M P+
Sbjct: 118 YAKSGRKEEALELFRRLPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLV 177
Query: 159 ------------------------------KSVVASNSMILGLGQNGEVQKARVVFDQMR 188
V SN++I + +V A+ +F +MR
Sbjct: 178 LSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMR 237
Query: 189 EKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQ 248
+D +W+ +I + G + + L+ M GV+ N + + ++ C+ + + GR+
Sbjct: 238 HRDVVSWTSLIVGMAQHGQAEKALALYDEMVSHGVKPNEVTFVGLIYACSHVGFVAKGRE 297
Query: 249 VHAQLVR-CQFDVDVYVASVLITMYIKCGELVKGK-LIFDNFASKDIVMWNSIISGYAQY 306
+ + + + + L+ + + G L + + LI D W +++S +
Sbjct: 298 LFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQ 357
Query: 307 GLGEKSLKVFHEMFSSGVMPDD----VTLVGVLSACSYTGKVKEGREIFESMK 355
G G+ +++ + SS P D + L + ++ S GKV E R M+
Sbjct: 358 GQGQMGVRIADHLVSS-FKPKDPSTYILLSNIYASASLWGKVSEARRKLGDME 409
>gi|225423549|ref|XP_002274857.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g69350, mitochondrial [Vitis vinifera]
Length = 875
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 221/621 (35%), Positives = 346/621 (55%), Gaps = 28/621 (4%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPE----KNVVSWTVMLGGFIRDSRIDDA 56
+P R WT M+ Y + G EA +F +M E N V+ +L R R+ +
Sbjct: 262 VPCRMTAPWTPMISCYNQSGCFQEALNVFAKMQEFKMEPNQVTMVGVLCACARLGRVKEG 321
Query: 57 RRLFD------MMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYV 110
R + M PE D + M L Y G + + ++F+ + +K ++SW T+IS +
Sbjct: 322 RSVHGFVIRRAMDPELDFLGPALMEL-YADTGNLRDCHKVFETIKEKTILSWNTLISIFT 380
Query: 111 NNNRIDVARKLF------EVMPEKNEVSWTAMLMG---YTQCGRIQDAWELFKAMPMKSV 161
N + + A LF +MP+ ++ + G ++Q G Q + K
Sbjct: 381 RNGQPEEALLLFVQMQTQGLMPDSYSLASSLSACGTISFSQLGA-QIHGYIIKTGNFNDF 439
Query: 162 VASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKE 221
V N++I + G V A +F++++EK TW+ MI + + GY +E I LF M
Sbjct: 440 V-QNALIDMYAKCGFVHSANKMFEKIKEKSLVTWNSMICGFSQNGYSVEAITLFDQMYMN 498
Query: 222 GVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKG 281
V+++ + +SV+ C+ L L+ G+ VH +L+ D Y+ + L MY KCGEL
Sbjct: 499 CVKMDKLTFLSVIQACSHLGYLEKGKWVHHKLIMYGLRKDSYLDTALTDMYSKCGELQMA 558
Query: 282 KLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYT 341
+FD + + IV W+ +I+GY +G ++ +F++M SG+ P+D+T + +LSACS+
Sbjct: 559 HGVFDRMSERSIVSWSVMIAGYGMHGQINATISLFNQMLGSGIKPNDITFMHILSACSHA 618
Query: 342 GKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGS 401
G V+EG+ F SM S++ VEPK +H+ACMVDLL RAG + A ++I ++PF ++ IWG+
Sbjct: 619 GAVEEGKLYFNSM-SEFGVEPKHDHFACMVDLLSRAGDLNGAYQIITSLPFPANSSIWGA 677
Query: 402 LLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNV 461
LL CR H ++D+ + K LL ++ + G Y LLSNIYA +G + ++R M+ + +
Sbjct: 678 LLNGCRIHKRIDIIKSIEKNLLDVDTADTGYYTLLSNIYAEEGTWDKFGKVRSMMKSKGL 737
Query: 462 IKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYC--PDSSFVLHD 519
K PG S IE++KK++ F D SH + I R LE L+ Y PD+S V
Sbjct: 738 RKVPGYSTIEIDKKIYRFGPGD-TSHSQTKDIYRFLENFRSLVHAQVYDSEPDNSIV--G 794
Query: 520 VDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREII 579
+ K +++ HSEKLA+A+G++ G +R+ KNLRVC DCHS K+ SK+ GREII
Sbjct: 795 TSKFNKENNVVSHSEKLAIAFGIINTRPGTTLRISKNLRVCRDCHSFAKIASKITGREII 854
Query: 580 LRDANRFHHFKDGLCSCRDYW 600
+RD NRFH F++G CSC DYW
Sbjct: 855 MRDLNRFHCFRNGSCSCNDYW 875
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 111/459 (24%), Positives = 206/459 (44%), Gaps = 82/459 (17%)
Query: 34 EKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDE 93
E + V T +L + S +DDA + FD MP +DVVA +++VL + Q+G+ EG ++F +
Sbjct: 132 ESDAVVETSLLCMYGEMSCLDDACKAFDTMPIRDVVAWSSIVLNFVQNGQASEGLDMFSQ 191
Query: 94 MPKKNV-ISWTTMIS------------------GYV-----------NNNRIDV------ 117
M + V TM+S GYV NN+ I +
Sbjct: 192 MISEAVEPDSVTMLSVTEACSELGSLRLGRSVHGYVVRREIESNASLNNSLIVMYGKLGD 251
Query: 118 ---ARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGL--- 171
A +LFE +P + WT M+ Y Q G Q+A +F M + + ++G+
Sbjct: 252 LYSAERLFENVPCRMTAPWTPMISCYNQSGCFQEALNVFAKMQEFKMEPNQVTMVGVLCA 311
Query: 172 -------------------------------------GQNGEVQKARVVFDQMREKDDAT 194
G ++ VF+ ++EK +
Sbjct: 312 CARLGRVKEGRSVHGFVIRRAMDPELDFLGPALMELYADTGNLRDCHKVFETIKEKTILS 371
Query: 195 WSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLV 254
W+ +I ++ R G E + LF MQ +G+ + SL S LS C +++ G Q+H ++
Sbjct: 372 WNTLISIFTRNGQPEEALLLFVQMQTQGLMPDSYSLASSLSACGTISFSQLGAQIHGYII 431
Query: 255 RCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLK 314
+ + + +V + LI MY KCG + +F+ K +V WNS+I G++Q G +++
Sbjct: 432 KTG-NFNDFVQNALIDMYAKCGFVHSANKMFEKIKEKSLVTWNSMICGFSQNGYSVEAIT 490
Query: 315 VFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLL 374
+F +M+ + V D +T + V+ ACS+ G +++G+ + + Y + + + D+
Sbjct: 491 LFDQMYMNCVKMDKLTFLSVIQACSHLGYLEKGKWVHHKLI-MYGLRKDSYLDTALTDMY 549
Query: 375 GRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLD 413
+ G+++ A + + M E + W ++ H +++
Sbjct: 550 SKCGELQMAHGVFDRMS-ERSIVSWSVMIAGYGMHGQIN 587
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 92/344 (26%), Positives = 159/344 (46%), Gaps = 12/344 (3%)
Query: 70 AQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFE--VMPE 127
A T ++ Y Q G + + +FD PK + W +I YV + A L+ V +
Sbjct: 35 ASTKLIESYAQIGIFESSKRVFDTFPKPDSFMWGVLIKCYVWGGFFEEAVSLYHEMVYQD 94
Query: 128 KNEVSWTAMLMGYTQCGRIQDA-------WELFKAMPMKSVVASNSMILGLGQNGEVQKA 180
+ ++S C D + K V S++ G+ + A
Sbjct: 95 QTQISNFVFPSVLKACSGFGDLSVGGKVHGRVIKCGFESDAVVETSLLCMYGEMSCLDDA 154
Query: 181 RVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASL 240
FD M +D WS ++ + + G E +D+F+ M E V + +++SV C+ L
Sbjct: 155 CKAFDTMPIRDVVAWSSIVLNFVQNGQASEGLDMFSQMISEAVEPDSVTMLSVTEACSEL 214
Query: 241 ASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSII 300
SL GR VH +VR + + + + + LI MY K G+L + +F+N + W +I
Sbjct: 215 GSLRLGRSVHGYVVRREIESNASLNNSLIVMYGKLGDLYSAERLFENVPCRMTAPWTPMI 274
Query: 301 SGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLV 360
S Y Q G +++L VF +M + P+ VT+VGVL AC+ G+VKEGR + + +
Sbjct: 275 SCYNQSGCFQEALNVFAKMQEFKMEPNQVTMVGVLCACARLGRVKEGRSV-HGFVIRRAM 333
Query: 361 EPKTEHYA-CMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
+P+ + +++L G + D K+ E + E + W +L+
Sbjct: 334 DPELDFLGPALMELYADTGNLRDCHKVFETIK-EKTILSWNTLI 376
>gi|115486527|ref|NP_001068407.1| Os11g0661000 [Oryza sativa Japonica Group]
gi|108864631|gb|ABG22570.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113645629|dbj|BAF28770.1| Os11g0661000 [Oryza sativa Japonica Group]
gi|215694601|dbj|BAG89792.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215701272|dbj|BAG92696.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 610
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 201/572 (35%), Positives = 337/572 (58%), Gaps = 15/572 (2%)
Query: 41 TVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEM------ 94
++ + + + DA LFD P +D+ ++++ + I M
Sbjct: 42 AALVSAYAKSRLLPDALHLFDETPRRDIYIYSSLLTAVSHSASPELALPILRCMLSADAL 101
Query: 95 -PKKNVISWTTMISGYVNNNRIDVARKL---FEVMP-EKNEVSWTAMLMGYTQCGRIQDA 149
P VIS + + + R+ R+L F V P ++V ++++ Y +CG D
Sbjct: 102 HPDHFVISSVASVFARLRSRRL--GRQLHAHFVVSPYNGDDVVKSSLVDMYCKCGSPDDG 159
Query: 150 WELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYEL 209
++F +M K+ V +++ G NG ++A +F M ++ W+ +I G +
Sbjct: 160 RKVFDSMSAKNSVVWTALVSGYASNGRSEEALQLFRSMPGRNLFAWTALISGLVNTGESV 219
Query: 210 EVIDLFTLMQKEGVRVNFPSLIS-VLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVL 268
++LF M+++GVR++ ++S V+ A LA+ GRQ+H +R F ++ V + L
Sbjct: 220 GAVELFVEMRRDGVRIDDAFVLSIVIGGSADLAAFVLGRQLHGSTMRLGFLSNMIVGNAL 279
Query: 269 ITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDD 328
I MY KC +++ + +F+ +D++ W +++ G AQ+G E++L ++ M +G P++
Sbjct: 280 IDMYSKCSDILSAREVFEGITFRDVISWTTMVVGEAQHGRAEEALALYDRMVLAGAKPNE 339
Query: 329 VTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIE 388
VT VG++ ACS+ G V++GR++FESMK++Y + P+ +HY C +DLL R+G + +A +L+
Sbjct: 340 VTFVGLIYACSHAGLVQKGRQLFESMKNEYGITPRLQHYTCYLDLLSRSGHLLEAEELMT 399
Query: 389 AMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHD 448
MP+EPD WG+LL AC + ++ + KLL+L PK++ YILLSN+YA G++
Sbjct: 400 TMPYEPDEATWGALLSACTKYKDAEMCIRISDKLLELRPKDSSTYILLSNVYAVNGKWDS 459
Query: 449 VAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAG 508
VA++RK M + K PG SWIE ++ +F + V IM LE++ +R+ G
Sbjct: 460 VAKVRKCMIGLEIRKEPGYSWIEAGREFRLFHAGE-VPLDVREEIMVFLEEMVLEMRKRG 518
Query: 509 YCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIK 568
Y PD+S V+HD++E EK H L HSE+LAVA+GL+K P G IRV+KNLRVC DCH+ +K
Sbjct: 519 YVPDTSSVMHDLEESEKEHHLFLHSERLAVAFGLIKSPPGSVIRVVKNLRVCVDCHTVMK 578
Query: 569 LISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
LIS++ R+I++RD++RFHHF+ G CSC ++W
Sbjct: 579 LISEITHRKIVVRDSSRFHHFEGGKCSCSEFW 610
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 112/250 (44%), Gaps = 18/250 (7%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
M +N V WTA+V GY G EA LF MP +N+ +WT ++ G + A LF
Sbjct: 166 MSAKNSVVWTALVSGYASNGRSEEALQLFRSMPGRNLFAWTALISGLVNTGESVGAVELF 225
Query: 61 DMMPEKDVVAQTNMVLGYCQDGRVD-----EGREIFDEMPK----KNVISWTTMISGYVN 111
M V VL G D GR++ + N+I +I Y
Sbjct: 226 VEMRRDGVRIDDAFVLSIVIGGSADLAAFVLGRQLHGSTMRLGFLSNMIVGNALIDMYSK 285
Query: 112 NNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGL 171
+ I AR++FE + ++ +SWT M++G Q GR ++A L+ M + + +GL
Sbjct: 286 CSDILSAREVFEGITFRDVISWTTMVVGEAQHGRAEEALALYDRMVLAGAKPNEVTFVGL 345
Query: 172 ----GQNGEVQKARVVFDQMREKDDAT-----WSGMIKVYERKGYELEVIDLFTLMQKEG 222
G VQK R +F+ M+ + T ++ + + R G+ LE +L T M E
Sbjct: 346 IYACSHAGLVQKGRQLFESMKNEYGITPRLQHYTCYLDLLSRSGHLLEAEELMTTMPYEP 405
Query: 223 VRVNFPSLIS 232
+ +L+S
Sbjct: 406 DEATWGALLS 415
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 42/219 (19%), Positives = 97/219 (44%), Gaps = 12/219 (5%)
Query: 247 RQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQY 306
R +HA++++ + L++ Y K L +FD +DI +++S+++ +
Sbjct: 23 RGMHARILKEGLAHHPPNPAALVSAYAKSRLLPDALHLFDETPRRDIYIYSSLLTAVSHS 82
Query: 307 GLGEKSLKVFHEMFSSGVM-PDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTE 365
E +L + M S+ + PD + V S + + GR+ + + ++V P
Sbjct: 83 ASPELALPILRCMLSADALHPDHFVISSVASVFARLRSRRLGRQ----LHAHFVVSPYNG 138
Query: 366 H---YACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKL 422
+ +VD+ + G +D K+ ++M + ++++W +L+ ++ + +E A +
Sbjct: 139 DDVVKSSLVDMYCKCGSPDDGRKVFDSMSAK-NSVVWTALVSGYASNGR---SEEALQLF 194
Query: 423 LQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNV 461
+ +N + L + + G EL MR+ V
Sbjct: 195 RSMPGRNLFAWTALISGLVNTGESVGAVELFVEMRRDGV 233
>gi|225431281|ref|XP_002268784.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Vitis vinifera]
Length = 647
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 214/601 (35%), Positives = 331/601 (55%), Gaps = 61/601 (10%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV--VSWTVMLGGFIRDSRIDDARRLFDM 62
N WTA++RGY +G E+ L+ M + + VS+T + + D+
Sbjct: 103 NPFLWTALIRGYALQGPFMESVLLYNSMRRQGIGPVSFTF-------TALLKACSAALDV 155
Query: 63 MPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLF 122
+ V QT ++ G+ D YV N ID+
Sbjct: 156 NLGRQVHTQTILIGGFGSDL--------------------------YVGNTLIDM----- 184
Query: 123 EVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARV 182
Y +CG + +F M + V++ S+I+ + G ++ A
Sbjct: 185 -----------------YVKCGCLGCGHRVFDEMLDRDVISWTSLIVAYAKVGNMEAASE 227
Query: 183 VFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLAS 242
+FD + KD W+ M+ Y + E +++F MQ GV+ + +L+ V+S CA L +
Sbjct: 228 LFDGLPMKDMVAWTAMVTGYAQNARPREALEVFERMQAAGVKTDEVTLVGVISACAQLGA 287
Query: 243 LDHGRQVHAQLVRCQF--DVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSII 300
+ V + F +V V S LI MY KCG + +F+ +++ ++S+I
Sbjct: 288 AKYANWVRDVAEQSGFGPTSNVVVGSALIDMYAKCGSVEDAYKVFERMEERNVYSYSSMI 347
Query: 301 SGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLV 360
G+A +GL ++++F EM + + P+ VT +GVL+ACS+ G V++G+++F M+ + V
Sbjct: 348 VGFAMHGLAGAAMELFDEMLKTEIKPNRVTFIGVLTACSHAGMVEQGQQLFAMMEECHGV 407
Query: 361 EPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAK 420
P +HYACMVDLLGRAG++E+A+ L++ MP P +WG+LLGACR H D+A++AA
Sbjct: 408 APSEDHYACMVDLLGRAGRLEEALNLVKMMPMNPHGGVWGALLGACRIHGNPDMAQIAAS 467
Query: 421 KLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKK-VHMF 479
L +LEP G YILLSNIYAS GR+ DV+++RK MR + + K PGCSW+E +K +H F
Sbjct: 468 HLFELEPNGIGNYILLSNIYASAGRWDDVSKVRKLMRAKGLKKNPGCSWVEGKKGIIHEF 527
Query: 480 TGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVA 539
D +SHP+ I + LE + L+ GY P+ S V +D+ +EEK L HSEKLA+A
Sbjct: 528 FAGD-MSHPKSREIKQALEDLLDRLKYLGYQPNLSSVAYDISDEEKKRLLMSHSEKLALA 586
Query: 540 YGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDY 599
+GL+ G IR++KNLR+C DCHS + S++ GREI++RD RFHHF+DG CSC ++
Sbjct: 587 FGLLTTNAGCTIRIVKNLRICEDCHSVMCGASQITGREIVVRDNMRFHHFRDGRCSCGNF 646
Query: 600 W 600
W
Sbjct: 647 W 647
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/245 (29%), Positives = 122/245 (49%), Gaps = 37/245 (15%)
Query: 181 RVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASL 240
R+VF Q+ + W+ +I+ Y +G +E + L+ M+++G+ + ++L C++
Sbjct: 93 RLVFQQVEYPNPFLWTALIRGYALQGPFMESVLLYNSMRRQGIGPVSFTFTALLKACSAA 152
Query: 241 ASLDHGRQVHAQLVRC-QFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSI 299
++ GRQVH Q + F D+YV + LI MY+KCG L G +FD +D++ W S+
Sbjct: 153 LDVNLGRQVHTQTILIGGFGSDLYVGNTLIDMYVKCGCLGCGHRVFDEMLDRDVISWTSL 212
Query: 300 I-------------------------------SGYAQYGLGEKSLKVFHEMFSSGVMPDD 328
I +GYAQ ++L+VF M ++GV D+
Sbjct: 213 IVAYAKVGNMEAASELFDGLPMKDMVAWTAMVTGYAQNARPREALEVFERMQAAGVKTDE 272
Query: 329 VTLVGVLSACSYTGKVKEG---REIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMK 385
VTLVGV+SAC+ G K R++ E +S + + ++D+ + G VEDA K
Sbjct: 273 VTLVGVISACAQLGAAKYANWVRDVAE--QSGFGPTSNVVVGSALIDMYAKCGSVEDAYK 330
Query: 386 LIEAM 390
+ E M
Sbjct: 331 VFERM 335
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 116/237 (48%), Gaps = 19/237 (8%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
M +R+V+SWT+++ Y + G + A LF +P K++V+WT M+ G+ +++R +A +F
Sbjct: 201 MLDRDVISWTSLIVAYAKVGNMEAASELFDGLPMKDMVAWTAMVTGYAQNARPREALEVF 260
Query: 61 DMMP----EKDVVAQTNMVLGYCQDGRVDEG---REIFDEM---PKKNVISWTTMISGYV 110
+ M + D V ++ Q G R++ ++ P NV+ + +I Y
Sbjct: 261 ERMQAAGVKTDEVTLVGVISACAQLGAAKYANWVRDVAEQSGFGPTSNVVVGSALIDMYA 320
Query: 111 NNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILG 170
++ A K+FE M E+N S+++M++G+ G A ELF M + + +G
Sbjct: 321 KCGSVEDAYKVFERMEERNVYSYSSMIVGFAMHGLAGAAMELFDEMLKTEIKPNRVTFIG 380
Query: 171 L----GQNGEVQKARVVFDQMRE-----KDDATWSGMIKVYERKGYELEVIDLFTLM 218
+ G V++ + +F M E + ++ M+ + R G E ++L +M
Sbjct: 381 VLTACSHAGMVEQGQQLFAMMEECHGVAPSEDHYACMVDLLGRAGRLEEALNLVKMM 437
>gi|224065723|ref|XP_002301939.1| predicted protein [Populus trichocarpa]
gi|222843665|gb|EEE81212.1| predicted protein [Populus trichocarpa]
Length = 613
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 199/537 (37%), Positives = 319/537 (59%), Gaps = 12/537 (2%)
Query: 74 MVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVA-----RKLFEVMPEK 128
+V Y + G + E+FDE+P K+++SW ++ISG+ + + R FE+ +
Sbjct: 79 LVSSYVELGCTKDALELFDELPDKDLVSWNSLISGFSRRADLGICLGLLFRMRFEMGLKP 138
Query: 129 NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKS-----VVASNSMILGLGQNGEVQKARVV 183
NEV+ ++ G + D + + +KS V NS+I G+ G ++ A +
Sbjct: 139 NEVTVIPVVSACAGVGEL-DVGKCIHGIAVKSGMLLEVKVVNSLINLYGKCGCLEAACCL 197
Query: 184 FDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASL 243
F+ M + +W+ M+ V+ G + I F +M++ G+ + +++S+L C +L
Sbjct: 198 FEGMSVQSLVSWNSMVAVHVHMGLAEKGIGYFIMMRRAGINSDQATVVSLLLACENLGVR 257
Query: 244 DHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGY 303
VH ++ D ++ +A+ L+ +Y K G L +F + D V W +++S Y
Sbjct: 258 KLAEAVHGYILNGGLDGNLAIATALLDLYAKLGTLSDSCKVFGGMINPDAVAWTAMLSSY 317
Query: 304 AQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPK 363
A +G G ++++ F M GV+PD VT +LSACS++G V+EG+ F+ M Y VE +
Sbjct: 318 AMHGRGREAIEHFELMVREGVVPDHVTFTHLLSACSHSGLVEEGKNYFKIMYEFYGVELR 377
Query: 364 TEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLL 423
EHY+CMVDLLGR+G + DA KLI++MP EP++ +WG+L+GACR ++L + A++L
Sbjct: 378 VEHYSCMVDLLGRSGHLNDAYKLIKSMPMEPNSGVWGALIGACRVRGNIELGKEVAERLF 437
Query: 424 QLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRD 483
L+P ++ YI LSN+Y++ G++ D +++R M++R +I+ PGCS+IE K+H F D
Sbjct: 438 SLDPSDSRNYITLSNMYSAAGQWRDASKVRALMKERVLIRNPGCSYIEHGNKIHCFVMGD 497
Query: 484 CVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLV 543
SHP+ I LE++ RE G+ + +VLHDVDEE K + HSEKLA+A+GL+
Sbjct: 498 -QSHPDTEQIYNKLEELVRKNREVGFASKTEYVLHDVDEEVKEDLINKHSEKLAIAFGLL 556
Query: 544 KLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
G+P+ + KN+R+CGDCH KLIS + R II+RD RFHHF +GLCSC DYW
Sbjct: 557 VTNAGMPLIITKNIRICGDCHGFAKLISLIEKRTIIIRDTKRFHHFTNGLCSCGDYW 613
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 105/191 (54%), Gaps = 11/191 (5%)
Query: 228 PSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDN 287
+LI+ +S C+S++ + R +H ++++ ++ L++ Y++ G +FD
Sbjct: 42 SALITAISTCSSIS---YCRALHCRVIKSVNYNHGFIGDQLVSSYVELGCTKDALELFDE 98
Query: 288 FASKDIVMWNSIISGYAQYG-LGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKE 346
KD+V WNS+ISG+++ LG +F F G+ P++VT++ V+SAC+ G++
Sbjct: 99 LPDKDLVSWNSLISGFSRRADLGICLGLLFRMRFEMGLKPNEVTVIPVVSACAGVGELDV 158
Query: 347 GREIFE-SMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
G+ I ++KS L+E K + +++L G+ G +E A L E M + + W S++
Sbjct: 159 GKCIHGIAVKSGMLLEVKVVN--SLINLYGKCGCLEAACCLFEGMSVQS-LVSWNSMVA- 214
Query: 406 CRTHMKLDLAE 416
H+ + LAE
Sbjct: 215 --VHVHMGLAE 223
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 113/527 (21%), Positives = 211/527 (40%), Gaps = 61/527 (11%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM-------PEK----NVVSWTVMLGGFIR 49
+P++++VSW +++ G+ + L ++M P + VVS +G
Sbjct: 99 LPDKDLVSWNSLISGFSRRADLGICLGLLFRMRFEMGLKPNEVTVIPVVSACAGVGELDV 158
Query: 50 DSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGY 109
I M+ E VV + G C G ++ +F+ M ++++SW +M++ +
Sbjct: 159 GKCIHGIAVKSGMLLEVKVVNSLINLYGKC--GCLEAACCLFEGMSVQSLVSWNSMVAVH 216
Query: 110 VNNNRIDVARKLFEVMP----EKNEVSWTAMLMGYTQCG--RIQDA---WELFKAMPMKS 160
V+ + F +M ++ + ++L+ G ++ +A + L +
Sbjct: 217 VHMGLAEKGIGYFIMMRRAGINSDQATVVSLLLACENLGVRKLAEAVHGYILNGGLDGNL 276
Query: 161 VVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQK 220
+A+ + L + G + + VF M D W+ M+ Y G E I+ F LM +
Sbjct: 277 AIATALLDL-YAKLGTLSDSCKVFGGMINPDAVAWTAMLSSYAMHGRGREAIEHFELMVR 335
Query: 221 EGVRVNFPSLISVLSVCASLASLDHGR---QVHAQLVRCQFDVDVYVASVLITMYIKCGE 277
EGV + + +LS C+ ++ G+ ++ + + V+ Y S ++ + + G
Sbjct: 336 EGVVPDHVTFTHLLSACSHSGLVEEGKNYFKIMYEFYGVELRVEHY--SCMVDLLGRSGH 393
Query: 278 LVKG-KLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDD----VTLV 332
L KLI + +W ++I G E +V +FS + P D +TL
Sbjct: 394 LNDAYKLIKSMPMEPNSGVWGALIGACRVRGNIELGKEVAERLFS--LDPSDSRNYITLS 451
Query: 333 GVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYA-------CMVDLLGRAGQVEDAMK 385
+ SA G+ ++ ++ MK + L+ Y C V E
Sbjct: 452 NMYSA---AGQWRDASKVRALMKERVLIRNPGCSYIEHGNKIHCFVMGDQSHPDTEQIYN 508
Query: 386 LIEAMPFEPDAIIWGS----LLGACRTHMKLDLAEVAAKKL---LQLEPKNAG-PYILLS 437
+E + + + + S +L +K DL ++KL L NAG P I+
Sbjct: 509 KLEELVRKNREVGFASKTEYVLHDVDEEVKEDLINKHSEKLAIAFGLLVTNAGMPLIITK 568
Query: 438 NIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDC 484
NI G H A+L + KR +I I K+ H FT C
Sbjct: 569 NIRIC-GDCHGFAKLISLIEKRTII-------IRDTKRFHHFTNGLC 607
>gi|449475140|ref|XP_004154387.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449522468|ref|XP_004168248.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
Length = 574
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 200/537 (37%), Positives = 313/537 (58%), Gaps = 10/537 (1%)
Query: 72 TNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPE---- 127
T +V YC + +FD + K+N+ W MI GY N ++A L+ M +
Sbjct: 40 TKLVNLYCICNSLTNAHLLFDRISKRNLFLWNVMIRGYAWNGPYELAISLYYQMRDYGLV 99
Query: 128 KNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKS----VVASNSMILGLGQNGEVQKARVV 183
++ ++ +L + +++ ++ K + V ++I + G V+ AR V
Sbjct: 100 PDKFTFPFVLKACSALSAMEEGKKIHKDVIRSGLESDVFVGAALIDMYAKCGCVESARQV 159
Query: 184 FDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASL 243
FD++ E+D W+ M+ Y + G E + L +M G++ + + ++ A L
Sbjct: 160 FDKIDERDVVCWNSMLATYSQNGQPDESLALCRVMAFNGLKPTEGTFVISIAASADNGLL 219
Query: 244 DHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGY 303
G+++H R F+ + V + L+ MY K G + + +F+ K +V WN++I+GY
Sbjct: 220 PQGKELHGYSWRHGFESNDKVKTALMDMYAKSGSVNVARSLFELLEEKRVVSWNAMITGY 279
Query: 304 AQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPK 363
A +G ++L +F EM V+PD +T VGVL+ACS+ G + EG+ F SM S + + P
Sbjct: 280 AMHGHANEALDLFKEM-KGKVLPDHITFVGVLAACSHGGLLNEGKMHFRSMISDFNIWPT 338
Query: 364 TEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLL 423
+HY CM+DLLG G++E+A KLI M EPDA +WG+LL +C+ H +++ E+A +KL+
Sbjct: 339 VQHYTCMIDLLGHCGRLEEAYKLIMEMRVEPDAGVWGALLHSCKIHGNVEMGELALEKLV 398
Query: 424 QLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRD 483
+LEP + G Y++LSN+YA G++ VA LR M + + K CSWIEV KVH F D
Sbjct: 399 ELEPDDGGNYVILSNMYAQAGKWDGVARLRDLMMNKGLKKSIACSWIEVGNKVHAFLSED 458
Query: 484 CVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLV 543
SHP+ I L++ G L++EAGY P V HDV+++EKV + HSE+LA+A+GL+
Sbjct: 459 -TSHPKSEAIYAELKRTGKLMKEAGYAPQVGSVFHDVEDDEKVDMVSCHSERLAIAFGLI 517
Query: 544 KLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
G + ++KNLR+C DCH AIK ISK+ REI +RD NR+HHFKDG+CSC D+W
Sbjct: 518 STSAGTKLLIIKNLRICEDCHVAIKFISKITEREITIRDVNRYHHFKDGVCSCGDFW 574
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 135/281 (48%), Gaps = 33/281 (11%)
Query: 129 NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMR 188
N + T ++ Y C + +A LF + +++ N MI G NG + A ++ QMR
Sbjct: 35 NPLLATKLVNLYCICNSLTNAHLLFDRISKRNLFLWNVMIRGYAWNGPYELAISLYYQMR 94
Query: 189 EKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQ 248
+ Y L V D FT FP VL C++L++++ G++
Sbjct: 95 D-----------------YGL-VPDKFT----------FP---FVLKACSALSAMEEGKK 123
Query: 249 VHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGL 308
+H ++R + DV+V + LI MY KCG + + +FD +D+V WNS+++ Y+Q G
Sbjct: 124 IHKDVIRSGLESDVFVGAALIDMYAKCGCVESARQVFDKIDERDVVCWNSMLATYSQNGQ 183
Query: 309 GEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYA 368
++SL + M +G+ P + T V ++A + G + +G+E+ ++ E +
Sbjct: 184 PDESLALCRVMAFNGLKPTEGTFVISIAASADNGLLPQGKEL-HGYSWRHGFESNDKVKT 242
Query: 369 CMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTH 409
++D+ ++G V A L E + E + W +++ H
Sbjct: 243 ALMDMYAKSGSVNVARSLFELLE-EKRVVSWNAMITGYAMH 282
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 94/174 (54%), Gaps = 2/174 (1%)
Query: 232 SVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASK 291
S+L C +++ G+Q+HA++ + + +A+ L+ +Y C L L+FD + +
Sbjct: 6 SLLQSCVVRKAIEPGKQLHARICQVGISFNPLLATKLVNLYCICNSLTNAHLLFDRISKR 65
Query: 292 DIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIF 351
++ +WN +I GYA G E ++ ++++M G++PD T VL ACS ++EG++I
Sbjct: 66 NLFLWNVMIRGYAWNGPYELAISLYYQMRDYGLVPDKFTFPFVLKACSALSAMEEGKKIH 125
Query: 352 ESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
+ + L E A ++D+ + G VE A ++ + + E D + W S+L
Sbjct: 126 KDVIRSGL-ESDVFVGAALIDMYAKCGCVESARQVFDKID-ERDVVCWNSMLAT 177
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 83/350 (23%), Positives = 164/350 (46%), Gaps = 29/350 (8%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVV----SWTVMLGGFIRDSRIDDA 56
+ +RN+ W M+RGY G A +L++QM + +V ++ +L S +++
Sbjct: 62 ISKRNLFLWNVMIRGYAWNGPYELAISLYYQMRDYGLVPDKFTFPFVLKACSALSAMEEG 121
Query: 57 RRLF-DMMP---EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+++ D++ E DV ++ Y + G V+ R++FD++ +++V+ W +M++ Y N
Sbjct: 122 KKIHKDVIRSGLESDVFVGAALIDMYAKCGCVESARQVFDKIDERDVVCWNSMLATYSQN 181
Query: 113 NRIDVARKLFEVMP----EKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMI 168
+ D + L VM + E ++ + G + EL +++ +
Sbjct: 182 GQPDESLALCRVMAFNGLKPTEGTFVISIAASADNGLLPQGKELHGYSWRHGFESNDKVK 241
Query: 169 LGL----GQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVR 224
L ++G V AR +F+ + EK +W+ MI Y G+ E +DLF M K V
Sbjct: 242 TALMDMYAKSGSVNVARSLFELLEEKRVVSWNAMITGYAMHGHANEALDLFKEM-KGKVL 300
Query: 225 VNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDV--DVYVASVLITMYIKCGELVKG- 281
+ + + VL+ C+ L+ G+ +H + + F++ V + +I + CG L +
Sbjct: 301 PDHITFVGVLAACSHGGLLNEGK-MHFRSMISDFNIWPTVQHYTCMIDLLGHCGRLEEAY 359
Query: 282 KLIFDNFASKDIVMWNSIISGYAQYG---LGEKSLKVFHEMFSSGVMPDD 328
KLI + D +W +++ +G +GE +L+ E+ PDD
Sbjct: 360 KLIMEMRVEPDAGVWGALLHSCKIHGNVEMGELALEKLVEL-----EPDD 404
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 60/279 (21%), Positives = 113/279 (40%), Gaps = 59/279 (21%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEA----------------GT------------LFWQM 32
+ ER+VV W +M+ Y + G E+ GT L Q
Sbjct: 163 IDERDVVCWNSMLATYSQNGQPDESLALCRVMAFNGLKPTEGTFVISIAASADNGLLPQG 222
Query: 33 PEKNVVSW-----------TVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQD 81
E + SW T ++ + + ++ AR LF+++ EK VV+ M+ GY
Sbjct: 223 KELHGYSWRHGFESNDKVKTALMDMYAKSGSVNVARSLFELLEEKRVVSWNAMITGYAMH 282
Query: 82 GRVDEGREIFDEMPKKNVISWTTMI--------SGYVNNNRIDVARKL--FEVMPEKNEV 131
G +E ++F EM K + T + G +N ++ + F + P
Sbjct: 283 GHANEALDLFKEMKGKVLPDHITFVGVLAACSHGGLLNEGKMHFRSMISDFNIWPTVQHY 342
Query: 132 SWTAMLMGYTQCGRIQDAWELFKAMPMK------SVVASNSMILGLGQNGEVQKARVVFD 185
+ L+G+ CGR+++A++L M ++ + + I G + GE+ ++V
Sbjct: 343 TCMIDLLGH--CGRLEEAYKLIMEMRVEPDAGVWGALLHSCKIHGNVEMGELALEKLV-- 398
Query: 186 QMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVR 224
++ D + + +Y + G V L LM +G++
Sbjct: 399 ELEPDDGGNYVILSNMYAQAGKWDGVARLRDLMMNKGLK 437
>gi|242077758|ref|XP_002448815.1| hypothetical protein SORBIDRAFT_06g033730 [Sorghum bicolor]
gi|241939998|gb|EES13143.1| hypothetical protein SORBIDRAFT_06g033730 [Sorghum bicolor]
Length = 913
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 225/638 (35%), Positives = 348/638 (54%), Gaps = 40/638 (6%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM-------PEKNVVSWTVMLGGFIRD--S 51
M +RNVVSWTA++ G+++ G T L +M P + +S ++ D +
Sbjct: 278 MRDRNVVSWTALMVGFLQHGDATGCLRLLGEMRAASEAAPNEYTLSASLKACCVTEDMGA 337
Query: 52 RIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMP-KKNVISWTTMISGYV 110
+ E+ V +++VL Y + GR+ + R +FD + + +W MISGY
Sbjct: 338 GVGIHGLCVRTGYEEHYVVASSLVLLYSKGGRIGDARRVFDCAGLGRGLATWNAMISGYA 397
Query: 111 NNNRIDVARKLFEVMP----------EKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKS 160
+ A +F M + +E ++ ++L G ++ ++ AM
Sbjct: 398 HAGHGRDALLVFREMRRRRRRHEDQHQPDEFTFASLLKACGGLGAPREGAQVHAAMAASG 457
Query: 161 V-VASNSMILG-----LGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDL 214
ASN+++ G + G + A VF+++ K+ W+ ++ + ++G +E ++L
Sbjct: 458 FSTASNAILAGALVDMYVKCGRLPVAMQVFERLERKNAIQWTTVVVGHAQEGQVMEALEL 517
Query: 215 FTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIK 274
F + G R + L S++ V A A ++ GRQVH V+ DV + ++ MY+K
Sbjct: 518 FRRFWRSGARADAHVLSSIVGVLADFALVEQGRQVHCYGVKSPAGTDVSAGNSIVDMYLK 577
Query: 275 CGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGV 334
CG + + +F ++++V W ++I+G ++GLG +++ +F EM + GV PD+VT + +
Sbjct: 578 CGLPDEAERMFREIPARNVVSWTTMINGLGKHGLGREAVAMFEEMRAGGVEPDEVTYLAL 637
Query: 335 LSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEP 394
LSACS+ G V E R F ++ V PK EHYACMVDLLGRAG++ +A LI MP EP
Sbjct: 638 LSACSHAGLVDECRRYFSCIRRDRTVRPKAEHYACMVDLLGRAGELREARDLIRTMPMEP 697
Query: 395 DAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRK 454
+W +LL ACR H + + A LL ++ N Y+ LSN++A G + + ++R
Sbjct: 698 TVGVWQTLLSACRVHKDVAVGREAGDVLLAIDGDNPVNYVTLSNVFAEAGAWRECHKVRD 757
Query: 455 NMRKRNVIKPPGCSWIEVEKKVHMF-TGRDCVSHPEHPMIMRMLEKIGGLLREA-GYCPD 512
MR+R + K GCSW+E+ K+VH F G D +HP+ I R+L + +RE GYC D
Sbjct: 758 AMRRRGLKKQGGCSWVEIGKEVHFFYGGGDEEAHPQAGDIRRVLRDVETRVREQLGYCAD 817
Query: 513 S-SFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGV---------PIRVMKNLRVCGD 562
F LHDVDEE + SLR HSE+LAV GL L GV PIRV KNLRVCGD
Sbjct: 818 DVQFALHDVDEESRAESLRAHSERLAV--GLWLLRNGVDGGGGGHRQPIRVYKNLRVCGD 875
Query: 563 CHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
CH K +S V+ R +++RDANRFH F+ G CSC+DYW
Sbjct: 876 CHEFFKGLSAVVRRALVVRDANRFHRFEHGTCSCKDYW 913
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 94/395 (23%), Positives = 156/395 (39%), Gaps = 89/395 (22%)
Query: 103 TTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVV 162
+I Y +D+A ++F M ++N VSWTA+++G+ Q G L M S
Sbjct: 256 NNLIDMYAKCGELDMAGEVFGGMRDRNVVSWTALMVGFLQHGDATGCLRLLGEMRAASEA 315
Query: 163 ASN----------------------------------------SMILGLGQNGEVQKARV 182
A N S++L + G + AR
Sbjct: 316 APNEYTLSASLKACCVTEDMGAGVGIHGLCVRTGYEEHYVVASSLVLLYSKGGRIGDARR 375
Query: 183 VFD-QMREKDDATWSGMIKVYERKGYELEVIDLFTLM---------QKEGVRVNFPSLIS 232
VFD + ATW+ MI Y G+ + + +F M Q + F SL
Sbjct: 376 VFDCAGLGRGLATWNAMISGYAHAGHGRDALLVFREMRRRRRRHEDQHQPDEFTFASL-- 433
Query: 233 VLSVCASLASLDHGRQVHAQLVRCQFDV--DVYVASVLITMYIKCGELVKGKLIFDNFAS 290
L C L + G QVHA + F + +A L+ MY+KCG L +F+
Sbjct: 434 -LKACGGLGAPREGAQVHAAMAASGFSTASNAILAGALVDMYVKCGRLPVAMQVFERLER 492
Query: 291 KDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREI 350
K+ + W +++ G+AQ G ++L++F + SG D L ++ + V++GR++
Sbjct: 493 KNAIQWTTVVVGHAQEGQVMEALELFRRFWRSGARADAHVLSSIVGVLADFALVEQGRQV 552
Query: 351 F---------------ESMKSKYL---VEPKTEH------------YACMVDLLGRAGQV 380
S+ YL + + E + M++ LG+ G
Sbjct: 553 HCYGVKSPAGTDVSAGNSIVDMYLKCGLPDEAERMFREIPARNVVSWTTMINGLGKHGLG 612
Query: 381 EDAMKLIEAM---PFEPDAIIWGSLLGACRTHMKL 412
+A+ + E M EPD + + +LL AC +H L
Sbjct: 613 REAVAMFEEMRAGGVEPDEVTYLALLSAC-SHAGL 646
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 95/208 (45%), Gaps = 19/208 (9%)
Query: 210 EVIDLFT-LMQKEGVRVNFPS--------LISVLSVCASLASLDHGRQVHAQLVRCQFDV 260
+ +D+ T L+ V FP+ + +L A +SL G Q+H L + F
Sbjct: 191 DCVDICTRLLCTNPVAFPFPTNPMERRKMIADLLRASAKGSSLRGGVQLHGALTKLGFGS 250
Query: 261 DVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEM- 319
D + + LI MY KCGEL +F +++V W +++ G+ Q+G L++ EM
Sbjct: 251 DTMLGNNLIDMYAKCGELDMAGEVFGGMRDRNVVSWTALMVGFLQHGDATGCLRLLGEMR 310
Query: 320 FSSGVMPDDVTLVGVLSACSYTGKVKEGREIFE-SMKSKYLVEPKTEHY---ACMVDLLG 375
+S P++ TL L AC T + G I +++ Y EHY + +V L
Sbjct: 311 AASEAAPNEYTLSASLKACCVTEDMGAGVGIHGLCVRTGY-----EEHYVVASSLVLLYS 365
Query: 376 RAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
+ G++ DA ++ + W +++
Sbjct: 366 KGGRIGDARRVFDCAGLGRGLATWNAMI 393
>gi|356544545|ref|XP_003540710.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Glycine max]
Length = 705
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 214/619 (34%), Positives = 338/619 (54%), Gaps = 88/619 (14%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MP+RN S+ A++ + G + EA +F MPE + SW M+ GF + R ++A R F
Sbjct: 80 MPQRNTFSYNAVLSVLTKFGKLDEAFNVFKSMPEPDQCSWNAMVSGFAQHDRFEEALRFF 139
Query: 61 DMMPEKDVVAQ--------------TNMVLG-------------------------YCQD 81
M +D V T++ +G Y +
Sbjct: 140 VDMHSEDFVLNEYSFGSALSACAGLTDLNMGIQIHALISKSRYLLDVYMGSALVDMYSKC 199
Query: 82 GRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVM----PEKNEV------ 131
G V + FD M +N++SW ++I+ Y N A ++F +M E +E+
Sbjct: 200 GVVACAQRAFDGMAVRNIVSWNSLITCYEQNGPAGKALEVFVMMMDNGVEPDEITLASVV 259
Query: 132 ----SWTAMLMG--------------------------YTQCGRIQDAWELFKAMPMKSV 161
SW+A+ G Y +C R+ +A +F MP+++V
Sbjct: 260 SACASWSAIREGLQIHARVVKRDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRNV 319
Query: 162 VASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKE 221
V+ SM+ G + V+ AR++F M EK+ +W+ +I Y + G E + LF L+++E
Sbjct: 320 VSETSMVCGYARAASVKAARLMFSNMMEKNVVSWNALIAGYTQNGENEEAVRLFLLLKRE 379
Query: 222 GVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQF------DVDVYVASVLITMYIKC 275
+ + ++L+ CA+LA L GRQ H Q+++ F + D++V + LI MY+KC
Sbjct: 380 SIWPTHYTFGNLLNACANLADLKLGRQAHTQILKHGFWFQSGEESDIFVGNSLIDMYMKC 439
Query: 276 GELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVL 335
G + G L+F+ +D+V WN++I GYAQ G G +L++F +M SG PD VT++GVL
Sbjct: 440 GMVEDGCLVFERMVERDVVSWNAMIVGYAQNGYGTNALEIFRKMLVSGQKPDHVTMIGVL 499
Query: 336 SACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPD 395
SACS+ G V+EGR F SM+++ + P +H+ CMVDLLGRAG +++A LI+ MP +PD
Sbjct: 500 SACSHAGLVEEGRRYFHSMRTELGLAPMKDHFTCMVDLLGRAGCLDEANDLIQTMPMQPD 559
Query: 396 AIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKN 455
++WGSLL AC+ H ++L + A+KL++++P N+GPY+LLSN+YA GR+ DV +RK
Sbjct: 560 NVVWGSLLAACKVHGNIELGKYVAEKLMEIDPLNSGPYVLLSNMYAELGRWKDVVRVRKQ 619
Query: 456 MRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSF 515
MR+R VIK PGCSWIE++ +VH+F +D HP I +L+ + ++ AGY P++
Sbjct: 620 MRQRGVIKQPGCSWIEIQSRVHVFMVKD-KRHPLKKDIHLVLKFLTEQMKWAGYVPEADD 678
Query: 516 VLHDVDEEEKVHSLRYHSE 534
++ EEE L H E
Sbjct: 679 --DEICEEESDSELVLHFE 695
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 82/254 (32%), Positives = 137/254 (53%)
Query: 139 GYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGM 198
Y +CG +DA ++F MP ++ + N+++ L + G++ +A VF M E D +W+ M
Sbjct: 63 AYGKCGYFEDARKVFDRMPQRNTFSYNAVLSVLTKFGKLDEAFNVFKSMPEPDQCSWNAM 122
Query: 199 IKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQF 258
+ + + E + F M E +N S S LS CA L L+ G Q+HA + + ++
Sbjct: 123 VSGFAQHDRFEEALRFFVDMHSEDFVLNEYSFGSALSACAGLTDLNMGIQIHALISKSRY 182
Query: 259 DVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHE 318
+DVY+ S L+ MY KCG + + FD A ++IV WNS+I+ Y Q G K+L+VF
Sbjct: 183 LLDVYMGSALVDMYSKCGVVACAQRAFDGMAVRNIVSWNSLITCYEQNGPAGKALEVFVM 242
Query: 319 MFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAG 378
M +GV PD++TL V+SAC+ ++EG +I + + +VD+ +
Sbjct: 243 MMDNGVEPDEITLASVVSACASWSAIREGLQIHARVVKRDKYRNDLVLGNALVDMYAKCR 302
Query: 379 QVEDAMKLIEAMPF 392
+V +A + + MP
Sbjct: 303 RVNEARLVFDRMPL 316
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 103/441 (23%), Positives = 200/441 (45%), Gaps = 81/441 (18%)
Query: 43 MLGGFIRDSRIDDARRLFDMMPE----KDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKN 98
+L +R DARR+ + + ++ Q +V Y + G ++ R++FD MP++N
Sbjct: 25 LLDSCVRSKSGIDARRIHARIIKTQFSSEIFIQNRLVDAYGKCGYFEDARKVFDRMPQRN 84
Query: 99 VISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAM-- 156
S+ ++S ++D A +F+ MPE ++ SW AM+ G+ Q R ++A F M
Sbjct: 85 TFSYNAVLSVLTKFGKLDEAFNVFKSMPEPDQCSWNAMVSGFAQHDRFEEALRFFVDMHS 144
Query: 157 ------------PMKSVVASNSMILGLGQNGEVQKARVV--------------------- 183
+ + + +G+ + + K+R +
Sbjct: 145 EDFVLNEYSFGSALSACAGLTDLNMGIQIHALISKSRYLLDVYMGSALVDMYSKCGVVAC 204
Query: 184 ----FDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCAS 239
FD M ++ +W+ +I YE+ G + +++F +M GV + +L SV+S CAS
Sbjct: 205 AQRAFDGMAVRNIVSWNSLITCYEQNGPAGKALEVFVMMMDNGVEPDEITLASVVSACAS 264
Query: 240 LASLDHGRQVHAQLV-RCQFDVDVYVASVLITMYIKCGELVKGKLIFD------------ 286
+++ G Q+HA++V R ++ D+ + + L+ MY KC + + +L+FD
Sbjct: 265 WSAIREGLQIHARVVKRDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRNVVSETS 324
Query: 287 -------------------NFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPD 327
N K++V WN++I+GY Q G E+++++F + + P
Sbjct: 325 MVCGYARAASVKAARLMFSNMMEKNVVSWNALIAGYTQNGENEEAVRLFLLLKRESIWPT 384
Query: 328 DVTLVGVLSACSYTGKVKEGREIF-ESMKSKYLVEPKTEH----YACMVDLLGRAGQVED 382
T +L+AC+ +K GR+ + +K + + E ++D+ + G VED
Sbjct: 385 HYTFGNLLNACANLADLKLGRQAHTQILKHGFWFQSGEESDIFVGNSLIDMYMKCGMVED 444
Query: 383 AMKLIEAMPFEPDAIIWGSLL 403
+ E M E D + W +++
Sbjct: 445 GCLVFERM-VERDVVSWNAMI 464
>gi|225457315|ref|XP_002281558.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980
[Vitis vinifera]
gi|297733922|emb|CBI15169.3| unnamed protein product [Vitis vinifera]
Length = 615
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 192/441 (43%), Positives = 275/441 (62%), Gaps = 1/441 (0%)
Query: 160 SVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQ 219
+V S +++ G V AR VFD++ +++ +W+ +I Y +VID+F MQ
Sbjct: 176 NVYVSTALVNMYGTCSSVSDARQVFDEIPDRNIVSWNALITGYNHNRMFRKVIDVFREMQ 235
Query: 220 KEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELV 279
G + +++ VL CA L +L+ GR + + + ++V+V + LI MY KCG +
Sbjct: 236 IAGAKPVEVTMVGVLLACAHLGALNQGRWIDDYIDHNRLRLNVFVGTALIDMYAKCGVVD 295
Query: 280 KGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACS 339
+ + IF K++ WN +ISGYA G GE +L+ F M PD+VT +GVL AC
Sbjct: 296 EAEKIFKAMRVKNVYTWNVLISGYAMNGRGESALQAFSRMIMEKFKPDEVTFLGVLCACC 355
Query: 340 YTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIW 399
+ G V EGR F SMK ++ + P+ EHY CMVDLLGRAG +++A +LI+AM +PD IIW
Sbjct: 356 HQGLVNEGRTYFTSMKEEFGLRPRIEHYGCMVDLLGRAGFLDEAQQLIQAMSMQPDPIIW 415
Query: 400 GSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKR 459
LLGACR H + L E A KKLL+LEP N Y+LL+N+YA R+ V E+R+ M R
Sbjct: 416 RELLGACRIHGNIQLGEFAIKKLLELEPNNGENYVLLANLYARDQRWDKVGEVREMMDCR 475
Query: 460 NVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHD 519
V K PGCS IE++ V+ F + + P + ++L + L+ AGY D+ +D
Sbjct: 476 RVRKVPGCSSIEIDNVVYEFVVSNYIK-PGFEEVYKLLADMNKKLKLAGYVADTGMASYD 534
Query: 520 VDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREII 579
++EEEK HSL YHSEKLA+A+GL+K P G+ +R++KNLR+C DCH K++SKV R+I
Sbjct: 535 IEEEEKEHSLMYHSEKLALAFGLLKSPSGLTLRIVKNLRICQDCHGFFKIVSKVYRRDIS 594
Query: 580 LRDANRFHHFKDGLCSCRDYW 600
+RD NRFHHF G CSC+DYW
Sbjct: 595 VRDRNRFHHFVGGACSCKDYW 615
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 111/215 (51%), Gaps = 2/215 (0%)
Query: 191 DDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVH 250
D + MI+ Y L + ++T M K G+ + + +VL A L + G+ +H
Sbjct: 106 DSDLCNSMIRCYTDSNKHLHSVFIYTQMWKNGIFPDSSTFPTVLKSVAQLCRQELGKAIH 165
Query: 251 AQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGE 310
+++ F+ +VYV++ L+ MY C + + +FD ++IV WN++I+GY +
Sbjct: 166 CCIIQMGFESNVYVSTALVNMYGTCSSVSDARQVFDEIPDRNIVSWNALITGYNHNRMFR 225
Query: 311 KSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACM 370
K + VF EM +G P +VT+VGVL AC++ G + +GR I + + L +
Sbjct: 226 KVIDVFREMQIAGAKPVEVTMVGVLLACAHLGALNQGRWIDDYIDHNRL-RLNVFVGTAL 284
Query: 371 VDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
+D+ + G V++A K+ +AM + + W L+
Sbjct: 285 IDMYAKCGVVDEAEKIFKAMRVK-NVYTWNVLISG 318
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 93/203 (45%), Gaps = 18/203 (8%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDM 62
E NV TA+V Y +++A +F ++P++N+VSW ++ G+ + R++ D+
Sbjct: 174 ESNVYVSTALVNMYGTCSSVSDARQVFDEIPDRNIVSWNALITGYNHNRMF---RKVIDV 230
Query: 63 MPEKDV-------VAQTNMVLGYCQDGRVDEGREIFDEMP----KKNVISWTTMISGYVN 111
E + V ++L G +++GR I D + + NV T +I Y
Sbjct: 231 FREMQIAGAKPVEVTMVGVLLACAHLGALNQGRWIDDYIDHNRLRLNVFVGTALIDMYAK 290
Query: 112 NNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGL 171
+D A K+F+ M KN +W ++ GY GR + A + F M M+ LG+
Sbjct: 291 CGVVDEAEKIFKAMRVKNVYTWNVLISGYAMNGRGESALQAFSRMIMEKFKPDEVTFLGV 350
Query: 172 ----GQNGEVQKARVVFDQMREK 190
G V + R F M+E+
Sbjct: 351 LCACCHQGLVNEGRTYFTSMKEE 373
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 93/198 (46%), Gaps = 10/198 (5%)
Query: 59 LFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNR---- 114
+ M E +V T +V Y V + R++FDE+P +N++SW +I+GY N+NR
Sbjct: 168 IIQMGFESNVYVSTALVNMYGTCSSVSDARQVFDEIPDRNIVSWNALITGY-NHNRMFRK 226
Query: 115 -IDVARKLFEVMPEKNEVSWTAMLMGYTQCGRI-QDAW--ELFKAMPMK-SVVASNSMIL 169
IDV R++ + EV+ +L+ G + Q W + ++ +V ++I
Sbjct: 227 VIDVFREMQIAGAKPVEVTMVGVLLACAHLGALNQGRWIDDYIDHNRLRLNVFVGTALID 286
Query: 170 GLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPS 229
+ G V +A +F MR K+ TW+ +I Y G + F+ M E + + +
Sbjct: 287 MYAKCGVVDEAEKIFKAMRVKNVYTWNVLISGYAMNGRGESALQAFSRMIMEKFKPDEVT 346
Query: 230 LISVLSVCASLASLDHGR 247
+ VL C ++ GR
Sbjct: 347 FLGVLCACCHQGLVNEGR 364
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 123/278 (44%), Gaps = 39/278 (14%)
Query: 34 EKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDE 93
E NV T ++ + S + DAR++FD +P++++V+ ++ GY + + ++F E
Sbjct: 174 ESNVYVSTALVNMYGTCSSVSDARQVFDEIPDRNIVSWNALITGYNHNRMFRKVIDVFRE 233
Query: 94 M-------------------PKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWT 134
M ++ I Y+++NR+ + N T
Sbjct: 234 MQIAGAKPVEVTMVGVLLACAHLGALNQGRWIDDYIDHNRLRL-----------NVFVGT 282
Query: 135 AMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQM----REK 190
A++ Y +CG + +A ++FKAM +K+V N +I G NG + A F +M +
Sbjct: 283 ALIDMYAKCGVVDEAEKIFKAMRVKNVYTWNVLISGYAMNGRGESALQAFSRMIMEKFKP 342
Query: 191 DDATWSGMIKVYERKGYELEVIDLFTLMQKE-GVRVNFPSLISVLSVCASLASLDHGRQV 249
D+ T+ G++ +G E FT M++E G+R ++ + LD +Q+
Sbjct: 343 DEVTFLGVLCACCHQGLVNEGRTYFTSMKEEFGLRPRIEHYGCMVDLLGRAGFLDEAQQL 402
Query: 250 HAQLVRCQFDVDVY---VASVLITMYIKCGELVKGKLI 284
Q + Q D ++ + + I I+ GE KL+
Sbjct: 403 -IQAMSMQPDPIIWRELLGACRIHGNIQLGEFAIKKLL 439
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 92/209 (44%), Gaps = 17/209 (8%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFI----RDSRIDDA 56
+P+RN+VSW A++ GY M + +F +M V + G + ++
Sbjct: 203 IPDRNIVSWNALITGYNHNRMFRKVIDVFREMQIAGAKPVEVTMVGVLLACAHLGALNQG 262
Query: 57 RRLFDMMPEK----DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
R + D + +V T ++ Y + G VDE +IF M KNV +W +ISGY N
Sbjct: 263 RWIDDYIDHNRLRLNVFVGTALIDMYAKCGVVDEAEKIFKAMRVKNVYTWNVLISGYAMN 322
Query: 113 NRIDVARKLFEVMP----EKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMK-----SVVA 163
R + A + F M + +EV++ +L G + + F +M + +
Sbjct: 323 GRGESALQAFSRMIMEKFKPDEVTFLGVLCACCHQGLVNEGRTYFTSMKEEFGLRPRIEH 382
Query: 164 SNSMILGLGQNGEVQKARVVFDQMREKDD 192
M+ LG+ G + +A+ + M + D
Sbjct: 383 YGCMVDLLGRAGFLDEAQQLIQAMSMQPD 411
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 72/153 (47%), Gaps = 10/153 (6%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFD-MM 63
NV TA++ Y + G++ EA +F M KNV +W V++ G+ + R + A + F M+
Sbjct: 277 NVFVGTALIDMYAKCGVVDEAEKIFKAMRVKNVYTWNVLISGYAMNGRGESALQAFSRMI 336
Query: 64 PEK---DVVAQTNMVLGYCQDGRVDEGREIFDEMPKK-----NVISWTTMISGYVNNNRI 115
EK D V ++ C G V+EGR F M ++ + + M+ +
Sbjct: 337 MEKFKPDEVTFLGVLCACCHQGLVNEGRTYFTSMKEEFGLRPRIEHYGCMVDLLGRAGFL 396
Query: 116 DVARKLFEVMP-EKNEVSWTAMLMGYTQCGRIQ 147
D A++L + M + + + W +L G IQ
Sbjct: 397 DEAQQLIQAMSMQPDPIIWRELLGACRIHGNIQ 429
>gi|195611854|gb|ACG27757.1| pentatricopeptide repeat protein PPR868-14 [Zea mays]
Length = 633
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 210/570 (36%), Positives = 319/570 (55%), Gaps = 18/570 (3%)
Query: 47 FIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEM--------PKKN 98
+ R+D A L P+ V T+ + + G + EM P +
Sbjct: 66 YAASGRLDLAVALLRRTPDPTAVFYTSAIHAHSSRGLHRAALALLSEMLLSRHGLLPTAH 125
Query: 99 VISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAM-P 157
+S + G + R + + + V+ TA+L Y + G A LF M P
Sbjct: 126 TLSASLPACGCLAVGRALHGYAVKLALSGEPYVA-TALLGMYARAGEAAAARALFDGMRP 184
Query: 158 MKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTL 217
VV+ +M+ + G++ AR +FD + KD W+ M+ Y + G E + LF
Sbjct: 185 DPHVVSVTAMLSCYAKMGQLDDARGLFDALPRKDLVCWNAMMDGYTQHGRPSEALRLFRQ 244
Query: 218 MQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLV----RCQFDVDVYVASVLITMYI 273
M + GV + S++ LS A L + + GR +H+ + R + ++ V + L+ MY
Sbjct: 245 MLRSGVEPDEVSVVLALSAVAQLGTAESGRWLHSFVANGGRRARVRLNARVGTALVDMYY 304
Query: 274 KCGELVKGKLIFDNFAS---KDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVT 330
KCG L + +F + +D+V WN++I+GYA +G ++L+ F ++ + G+ P D+T
Sbjct: 305 KCGSLEEAVAVFRDLGGGGDRDVVAWNAMINGYAMHGRSREALEAFGQLRAQGLWPTDIT 364
Query: 331 LVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAM 390
+GVL+ACS++G V EGR +F +M+ +Y + PK EHY CMVDLLGRAG+VE+A L+++M
Sbjct: 365 FIGVLNACSHSGLVDEGRALFAAMEEEYGIVPKVEHYGCMVDLLGRAGRVEEAFDLVQSM 424
Query: 391 PFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVA 450
+PDA +W SLLGACR H L L + A L+ N+G Y+LLSN+YA+ G++ +V
Sbjct: 425 KAKPDAAMWASLLGACRLHKNLALGQRVADYLVGNGLANSGTYVLLSNMYAAAGKWREVG 484
Query: 451 ELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYC 510
+R MR V K PGCS +EV ++V F D SHP I LE++ + R G+
Sbjct: 485 RVRSMMRASGVQKEPGCSAVEVGRRVVEFVAGD-RSHPRSAEIYAKLEEVNSIARARGHV 543
Query: 511 PDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLI 570
P + VLHD+D+ K +L HSEKLA+A+GL+ P I+++KNLR C DCH+ +KL+
Sbjct: 544 PHTELVLHDLDDAAKERALAVHSEKLALAFGLISTPPRTGIKIVKNLRACADCHAVLKLV 603
Query: 571 SKVMGREIILRDANRFHHFKDGLCSCRDYW 600
S+ GR+I+ RD NRFHHF DG CSC DYW
Sbjct: 604 SEATGRKIVFRDRNRFHHFVDGSCSCGDYW 633
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 108/232 (46%), Gaps = 20/232 (8%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQM-PEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDV 68
TA++ Y G A LF M P+ +VVS T ML + + ++DDAR LFD +P KD+
Sbjct: 160 TALLGMYARAGEAAAARALFDGMRPDPHVVSVTAMLSCYAKMGQLDDARGLFDALPRKDL 219
Query: 69 VAQTNMVLGYCQDGRVDEGREIFDEMPKKNV----ISWTTMISGYVNNNRIDVARKLFEV 124
V M+ GY Q GR E +F +M + V +S +S + R L
Sbjct: 220 VCWNAMMDGYTQHGRPSEALRLFRQMLRSGVEPDEVSVVLALSAVAQLGTAESGRWLHSF 279
Query: 125 MPEK--------NEVSWTAMLMGYTQCGRIQDAWELFKAMPM---KSVVASNSMILGLGQ 173
+ N TA++ Y +CG +++A +F+ + + VVA N+MI G
Sbjct: 280 VANGGRRARVRLNARVGTALVDMYYKCGSLEEAVAVFRDLGGGGDRDVVAWNAMINGYAM 339
Query: 174 NGEVQKARVVFDQMREK----DDATWSGMIKVYERKGYELEVIDLFTLMQKE 221
+G ++A F Q+R + D T+ G++ G E LF M++E
Sbjct: 340 HGRSREALEAFGQLRAQGLWPTDITFIGVLNACSHSGLVDEGRALFAAMEEE 391
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/321 (22%), Positives = 132/321 (41%), Gaps = 49/321 (15%)
Query: 134 TAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGL----GQNGEVQKARVVFDQMRE 189
A+L G C A E+ A SV ++ L +G + A + + +
Sbjct: 28 AALLAG---CASASRAAEIHAAAVRASVDQDKAVAFRLQRAYAASGRLDLAVALLRRTPD 84
Query: 190 KDDATWSGMIKVYERKGYELEVIDLFT--LMQKEGVRVNFPSLISVLSVCASLASLDHGR 247
++ I + +G + L + L+ + G+ +L + L C LA GR
Sbjct: 85 PTAVFYTSAIHAHSSRGLHRAALALLSEMLLSRHGLLPTAHTLSASLPACGCLAV---GR 141
Query: 248 QVHAQLVRCQFDVDVYVASVLITM--------------------------------YIKC 275
+H V+ + YVA+ L+ M Y K
Sbjct: 142 ALHGYAVKLALSGEPYVATALLGMYARAGEAAAARALFDGMRPDPHVVSVTAMLSCYAKM 201
Query: 276 GELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVL 335
G+L + +FD KD+V WN+++ GY Q+G ++L++F +M SGV PD+V++V L
Sbjct: 202 GQLDDARGLFDALPRKDLVCWNAMMDGYTQHGRPSEALRLFRQMLRSGVEPDEVSVVLAL 261
Query: 336 SACSYTGKVKEGREIFESMKS---KYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAM-- 390
SA + G + GR + + + + V +VD+ + G +E+A+ + +
Sbjct: 262 SAVAQLGTAESGRWLHSFVANGGRRARVRLNARVGTALVDMYYKCGSLEEAVAVFRDLGG 321
Query: 391 PFEPDAIIWGSLLGACRTHMK 411
+ D + W +++ H +
Sbjct: 322 GGDRDVVAWNAMINGYAMHGR 342
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 132/301 (43%), Gaps = 30/301 (9%)
Query: 2 PERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFD 61
P+ +VVS TAM+ Y + G + +A LF +P K++V W M+ G+ + R +A RLF
Sbjct: 184 PDPHVVSVTAMLSCYAKMGQLDDARGLFDALPRKDLVCWNAMMDGYTQHGRPSEALRLFR 243
Query: 62 MM----PEKDVVAQTNMVLGYCQDGRVDEGREIFDEMP--------KKNVISWTTMISGY 109
M E D V+ + Q G + GR + + + N T ++ Y
Sbjct: 244 QMLRSGVEPDEVSVVLALSAVAQLGTAESGRWLHSFVANGGRRARVRLNARVGTALVDMY 303
Query: 110 VNNNRIDVARKLFEVM---PEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNS 166
++ A +F + +++ V+W AM+ GY GR ++A E F + + + ++
Sbjct: 304 YKCGSLEEAVAVFRDLGGGGDRDVVAWNAMINGYAMHGRSREALEAFGQLRAQGLWPTDI 363
Query: 167 MILGL----GQNGEVQKARVVFDQMREKDDAT-----WSGMIKVYERKGYELEVIDLFTL 217
+G+ +G V + R +F M E+ + M+ + R G V + F L
Sbjct: 364 TFIGVLNACSHSGLVDEGRALFAAMEEEYGIVPKVEHYGCMVDLLGRAG---RVEEAFDL 420
Query: 218 MQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQF-DVDVYVASVLITMYIKCG 276
+Q + + S+L C +L G++V LV + YV +L MY G
Sbjct: 421 VQSMKAKPDAAMWASLLGACRLHKNLALGQRVADYLVGNGLANSGTYV--LLSNMYAAAG 478
Query: 277 E 277
+
Sbjct: 479 K 479
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 100/224 (44%), Gaps = 25/224 (11%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV----VSWTVMLGGFIRDSRIDDA 56
+P +++V W AM+ GY + G +EA LF QM V VS + L + +
Sbjct: 214 LPRKDLVCWNAMMDGYTQHGRPSEALRLFRQMLRSGVEPDEVSVVLALSAVAQLGTAESG 273
Query: 57 RRLFDMMPEKDVVAQ--------TNMVLGYCQDGRVDEGREIFDEM---PKKNVISWTTM 105
R L + A+ T +V Y + G ++E +F ++ ++V++W M
Sbjct: 274 RWLHSFVANGGRRARVRLNARVGTALVDMYYKCGSLEEAVAVFRDLGGGGDRDVVAWNAM 333
Query: 106 ISGYVNNNRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAMP---- 157
I+GY + R A + F + + ++++ +L + G + + LF AM
Sbjct: 334 INGYAMHGRSREALEAFGQLRAQGLWPTDITFIGVLNACSHSGLVDEGRALFAAMEEEYG 393
Query: 158 -MKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDAT-WSGMI 199
+ V M+ LG+ G V++A + M+ K DA W+ ++
Sbjct: 394 IVPKVEHYGCMVDLLGRAGRVEEAFDLVQSMKAKPDAAMWASLL 437
>gi|297831082|ref|XP_002883423.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329263|gb|EFH59682.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 679
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 202/525 (38%), Positives = 293/525 (55%), Gaps = 40/525 (7%)
Query: 115 IDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAM----------------PM 158
ID RK+FE+MP K+ VS+ ++ GY Q G +DA + + M P+
Sbjct: 156 IDSVRKVFELMPRKDVVSYNTVIAGYAQSGMYEDALRMVREMGTSDLKPDAFTLSSVLPI 215
Query: 159 KS-----------------------VVASNSMILGLGQNGEVQKARVVFDQMREKDDATW 195
S V +S++ ++ ++ + VF + +D +W
Sbjct: 216 FSEYVDVLKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSHLYRRDSISW 275
Query: 196 SGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVR 255
+ ++ Y + G E + LF M VR + SV+ CA LA+L G+Q+H ++R
Sbjct: 276 NSLVAGYVQNGRYNEALRLFRQMVSAKVRPGAVAFSSVIPACAHLATLHLGKQLHGYVLR 335
Query: 256 CQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKV 315
F ++++AS L+ MY KCG + + IFD D V W +II G+A +G G +++ +
Sbjct: 336 GGFGRNIFIASALVDMYSKCGNIQAARKIFDRMNLHDEVSWTAIIMGHALHGHGHEAVSL 395
Query: 316 FHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLG 375
F EM GV P+ V V VL+ACS+ G V E F SM Y + + EHYA + DLLG
Sbjct: 396 FEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLG 455
Query: 376 RAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYIL 435
RAG++E+A I M EP +W +LL +C H L+LAE A+K+ ++ +N G Y+L
Sbjct: 456 RAGKLEEAYDFISKMRVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTIDSENMGAYVL 515
Query: 436 LSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMR 495
+ N+YAS GR+ ++A+LR +RK+ + K P CSWIE++ K H F D SHP I
Sbjct: 516 MCNMYASNGRWKEMAKLRLRVRKKGLRKKPACSWIEMKNKTHGFVSGD-RSHPSMDRINE 574
Query: 496 MLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMK 555
L+ + + + GY D+S VLHDVDEE K L HSE+LAVA+G++ G IRV K
Sbjct: 575 FLKAVMEQMEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINTEPGTTIRVTK 634
Query: 556 NLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
N+R+C DCH AIK ISK+ REII+RD +RFHHF G CSC DYW
Sbjct: 635 NIRICTDCHVAIKFISKITEREIIVRDNSRFHHFNRGSCSCGDYW 679
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 120/244 (49%), Gaps = 3/244 (1%)
Query: 163 ASNSMILGLGQNGEV-QKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKE 221
S S+++ + N ++ +A +VF + W +I+ + + + F M+
Sbjct: 40 TSASIVISIYTNLKLLHEALLVFKTLESPPVLAWKSVIRCFTDQSLFSRALASFVEMRAS 99
Query: 222 GVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKG 281
G + SVL C + L G VH +VR D D+Y + L+ MY K +
Sbjct: 100 GRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYSKLLGIDSV 159
Query: 282 KLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYT 341
+ +F+ KD+V +N++I+GYAQ G+ E +L++ EM +S + PD TL VL S
Sbjct: 160 RKVFELMPRKDVVSYNTVIAGYAQSGMYEDALRMVREMGTSDLKPDAFTLSSVLPIFSEY 219
Query: 342 GKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGS 401
V +G+EI + K ++ + +VD+ ++ ++ED+ ++ + + D+I W S
Sbjct: 220 VDVLKGKEIHGYVIRKG-IDSDVYIGSSLVDMYAKSARIEDSERVFSHL-YRRDSISWNS 277
Query: 402 LLGA 405
L+
Sbjct: 278 LVAG 281
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/260 (21%), Positives = 131/260 (50%), Gaps = 16/260 (6%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV----VSWTVMLGGFIRDSRIDDA 56
MP ++VVS+ ++ GY + GM +A + +M ++ + + +L F +
Sbjct: 166 MPRKDVVSYNTVIAGYAQSGMYEDALRMVREMGTSDLKPDAFTLSSVLPIFSEYVDVLKG 225
Query: 57 RRLFDMMPEK----DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+ + + K DV +++V Y + R+++ +F + +++ ISW ++++GYV N
Sbjct: 226 KEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSHLYRRDSISWNSLVAGYVQN 285
Query: 113 NRIDVARKLFEVMPEKN----EVSWTAMLMGYTQCGRIQDAWEL----FKAMPMKSVVAS 164
R + A +LF M V++++++ + +L + +++ +
Sbjct: 286 GRYNEALRLFRQMVSAKVRPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGRNIFIA 345
Query: 165 NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVR 224
++++ + G +Q AR +FD+M D+ +W+ +I + G+ E + LF M+++GV+
Sbjct: 346 SALVDMYSKCGNIQAARKIFDRMNLHDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVK 405
Query: 225 VNFPSLISVLSVCASLASLD 244
N + ++VL+ C+ + +D
Sbjct: 406 PNQVAFVAVLTACSHVGLVD 425
>gi|297794157|ref|XP_002864963.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297310798|gb|EFH41222.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 720
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 219/620 (35%), Positives = 358/620 (57%), Gaps = 26/620 (4%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVV----SWTVMLGGFIRDSRIDDA 56
MPER++V+W +++ Y++ EA ++ M NV+ + + + F S +A
Sbjct: 107 MPERHIVTWNSIIAYYIKHRRSKEAVEMYRLMISNNVLPDEYTLSSVFKAFSDLSLEKEA 166
Query: 57 RRLFDM-----MPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVN 111
+R + + +V + +V Y + G+ E + + D + +K+V+ T +I GY
Sbjct: 167 QRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQ 226
Query: 112 NNRIDVARKLFEVM----PEKNEVSWTAMLMGYTQCGRIQD--AWELFKAMPMKS----V 161
A K F+ M + NE ++ ++L+ CG ++D +L + +KS
Sbjct: 227 KGEDTEAVKAFQSMLVEKVQPNEYTYASVLIS---CGNLKDIGNGKLIHGLMVKSGFESA 283
Query: 162 VASNSMILGLG-QNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQK 220
+AS + +L + + V + +VF ++ + TW+ +I + G E + F M +
Sbjct: 284 LASQTSLLTMYLRCSLVDDSLLVFKCIKYPNQVTWTSLISGLVQNGREETALIEFRKMMR 343
Query: 221 EGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVK 280
+ V+ N +L S L C++LA + GRQVH + + FD D Y S LI +Y KCG
Sbjct: 344 DSVKPNSFTLSSALRGCSNLAMFEEGRQVHGIVSKYGFDRDKYAGSGLIELYGKCGCSDM 403
Query: 281 GKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSY 340
+L+FD + D++ N++I YAQ G G ++L++F M + G+ P+DVT++ VL AC+
Sbjct: 404 ARLVFDTLSEVDVISLNTMIYSYAQNGFGREALELFERMINLGLQPNDVTVLSVLLACNN 463
Query: 341 TGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWG 400
+G V+EG E+F+S + K + +HYACMVD+LGRAG++E+A LI + PD ++W
Sbjct: 464 SGLVEEGCELFDSFR-KDKIMLTNDHYACMVDMLGRAGRLEEAEMLITEVT-NPDLVLWR 521
Query: 401 SLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRN 460
+LL AC+ H K+++AE +K+L++ P + G ILLSN+YAS G++ V E++ M++
Sbjct: 522 TLLSACKVHRKVEMAERITRKILEIAPGDEGTLILLSNLYASTGKWKRVIEMKSKMKEMK 581
Query: 461 VIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDV 520
+ K P SW+E++K+ H F D SHP I+ LE++ ++ GY D S V D+
Sbjct: 582 LKKNPAMSWVEIDKETHTFMAGDLFSHPNSEQILENLEELIKKAKDLGYVEDKSCVFQDM 641
Query: 521 DEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIIL 580
+E K SL HSEKLA+A+ + + G IR++KNLRVC DCHS IK++S+++ REII
Sbjct: 642 EETAKERSLHQHSEKLAIAFAVWR-NVGGSIRILKNLRVCVDCHSWIKIVSRIIKREIIC 700
Query: 581 RDANRFHHFKDGLCSCRDYW 600
RD+ RFHHF+DG CSC DYW
Sbjct: 701 RDSKRFHHFRDGSCSCGDYW 720
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 166/331 (50%), Gaps = 11/331 (3%)
Query: 82 GRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKN----EVSWTAML 137
G + R++FD MP++++++W ++I+ Y+ + R A +++ +M N E + +++
Sbjct: 95 GEIGYARQLFDGMPERHIVTWNSIIAYYIKHRRSKEAVEMYRLMISNNVLPDEYTLSSVF 154
Query: 138 MGYTQCGRIQDAWE-----LFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDD 192
++ ++A + + + +V ++++ + G+ ++A++V D++ EKD
Sbjct: 155 KAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDV 214
Query: 193 ATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQ 252
+ +I Y +KG + E + F M E V+ N + SVL C +L + +G+ +H
Sbjct: 215 VLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGL 274
Query: 253 LVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKS 312
+V+ F+ + + L+TMY++C + L+F + V W S+ISG Q G E +
Sbjct: 275 MVKSGFESALASQTSLLTMYLRCSLVDDSLLVFKCIKYPNQVTWTSLISGLVQNGREETA 334
Query: 313 LKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVD 372
L F +M V P+ TL L CS +EGR++ + SKY + + +++
Sbjct: 335 LIEFRKMMRDSVKPNSFTLSSALRGCSNLAMFEEGRQV-HGIVSKYGFDRDKYAGSGLIE 393
Query: 373 LLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
L G+ G D +L+ E D I +++
Sbjct: 394 LYGKCG-CSDMARLVFDTLSEVDVISLNTMI 423
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 64/116 (55%), Gaps = 1/116 (0%)
Query: 233 VLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKD 292
+L C S+ + + AQ+++ F V++ S L+ +KCGE+ + +FD +
Sbjct: 53 LLRQCIDERSISGIKNIQAQMLKSGFPVELS-GSKLVDASLKCGEIGYARQLFDGMPERH 111
Query: 293 IVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGR 348
IV WNSII+ Y ++ +++++++ M S+ V+PD+ TL V A S KE +
Sbjct: 112 IVTWNSIIAYYIKHRRSKEAVEMYRLMISNNVLPDEYTLSSVFKAFSDLSLEKEAQ 167
>gi|357509743|ref|XP_003625160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124360204|gb|ABN08217.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355500175|gb|AES81378.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 596
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 210/524 (40%), Positives = 316/524 (60%), Gaps = 15/524 (2%)
Query: 89 EIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVM-----PEKNEVSWTAM----LMG 139
+IF + P K+ +W+++IS + N+ ++ F +M P + + +A ++
Sbjct: 76 QIFHDSPHKSATTWSSVISSFAQNDLPLLSLNYFRLMLRQGVPPDDHIFPSATKSCGILS 135
Query: 140 YTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMI 199
++ + L A + V S S+I + G++ A VFD+M ++ +WSG+I
Sbjct: 136 SLPVAKMLHCFALKTAYHLDIFVGS-SVIDMYAKCGDICYAHNVFDEMPYRNVVSWSGLI 194
Query: 200 KVYERKGYELEVIDLFT--LMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQ 257
Y + G + E + LF L+++E VN +L SVL VC L GR +H +
Sbjct: 195 YGYVQLGEDDESLRLFKRFLVEEENEGVNDFTLSSVLRVCGGSTLLQMGRLIHGLSFKTS 254
Query: 258 FDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFH 317
FD +VAS LI++Y KCG + + +F+ +++ MWN+++ AQ+ +K+ ++F
Sbjct: 255 FDSSCFVASSLISLYSKCGVVEEAYDVFEEVTVRNLGMWNAMLIACAQHAHTDKTFELFD 314
Query: 318 EMFSSGVMPDD-VTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGR 376
+M S G M + +T + VL ACS+ G V++G+ FE MK Y +EP T+HY+ MVDLLGR
Sbjct: 315 KMKSVGGMKANFITFLCVLYACSHAGLVEKGKYYFELMKD-YGIEPGTQHYSTMVDLLGR 373
Query: 377 AGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILL 436
AG++ DA+KLIE MP EP +WG+LL CR H LA A ++ +L ++G +++L
Sbjct: 374 AGKLNDAVKLIEEMPMEPTESVWGALLTGCRLHGNTKLASYVADRVSELGSVSSGLHVML 433
Query: 437 SNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRM 496
SN YA+ GR+ + A+ RK MR R + K G SW+E ++H F D SH + I
Sbjct: 434 SNAYAAAGRWEEAAKARKMMRDRGIKKETGLSWVEEGNRIHTFAAGD-RSHAKSVEIYDK 492
Query: 497 LEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKN 556
L+++G + +AGY D+SFVL +VD EEK S+RYHSE+LA+A+G + P G PIRVMKN
Sbjct: 493 LDELGEEMDKAGYVADTSFVLKEVDGEEKSRSIRYHSERLAIAFGFITFPHGQPIRVMKN 552
Query: 557 LRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
LRVCGDCH+AIK ISK GR II+RD NRFH F+DG C+C DYW
Sbjct: 553 LRVCGDCHTAIKFISKCTGRVIIVRDNNRFHRFEDGKCTCGDYW 596
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/327 (20%), Positives = 146/327 (44%), Gaps = 22/327 (6%)
Query: 2 PERNVVSWTAMVRGYVEEGMITEAGTLFWQM------PEKNVVSWTVMLGGFIRDSRIDD 55
P ++ +W++++ + + + + F M P+ ++ G + +
Sbjct: 82 PHKSATTWSSVISSFAQNDLPLLSLNYFRLMLRQGVPPDDHIFPSATKSCGILSSLPVAK 141
Query: 56 ARRLFDMMP--EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNN 113
F + D+ ++++ Y + G + +FDEMP +NV+SW+ +I GYV
Sbjct: 142 MLHCFALKTAYHLDIFVGSSVIDMYAKCGDICYAHNVFDEMPYRNVVSWSGLIYGYVQLG 201
Query: 114 RIDVARKLFE--VMPEKNE----VSWTAMLM---GYT--QCGRIQDAWELFKAMPMKSVV 162
D + +LF+ ++ E+NE + +++L G T Q GR+ FK S
Sbjct: 202 EDDESLRLFKRFLVEEENEGVNDFTLSSVLRVCGGSTLLQMGRLIHGLS-FKTSFDSSCF 260
Query: 163 ASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQK-E 221
++S+I + G V++A VF+++ ++ W+ M+ + + + +LF M+
Sbjct: 261 VASSLISLYSKCGVVEEAYDVFEEVTVRNLGMWNAMLIACAQHAHTDKTFELFDKMKSVG 320
Query: 222 GVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKG 281
G++ NF + + VL C+ ++ G+ + + S ++ + + G+L
Sbjct: 321 GMKANFITFLCVLYACSHAGLVEKGKYYFELMKDYGIEPGTQHYSTMVDLLGRAGKLNDA 380
Query: 282 -KLIFDNFASKDIVMWNSIISGYAQYG 307
KLI + +W ++++G +G
Sbjct: 381 VKLIEEMPMEPTESVWGALLTGCRLHG 407
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 99/219 (45%), Gaps = 20/219 (9%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLF--WQMPEKNVVSWTVMLGGFIR---DSRIDD 55
MP RNVVSW+ ++ GYV+ G E+ LF + + E+N L +R S +
Sbjct: 182 MPYRNVVSWSGLIYGYVQLGEDDESLRLFKRFLVEEENEGVNDFTLSSVLRVCGGSTLLQ 241
Query: 56 ARRL-----FDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYV 110
RL F + ++++ Y + G V+E ++F+E+ +N+ W M+
Sbjct: 242 MGRLIHGLSFKTSFDSSCFVASSLISLYSKCGVVEEAYDVFEEVTVRNLGMWNAMLIACA 301
Query: 111 NNNRIDVARKLFEVMP-----EKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVAS- 164
+ D +LF+ M + N +++ +L + G ++ F+ M +
Sbjct: 302 QHAHTDKTFELFDKMKSVGGMKANFITFLCVLYACSHAGLVEKGKYYFELMKDYGIEPGT 361
Query: 165 ---NSMILGLGQNGEVQKARVVFDQM-REKDDATWSGMI 199
++M+ LG+ G++ A + ++M E ++ W ++
Sbjct: 362 QHYSTMVDLLGRAGKLNDAVKLIEEMPMEPTESVWGALL 400
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 70/163 (42%), Gaps = 4/163 (2%)
Query: 242 SLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIIS 301
SL G Q+HA +++ ++ LI Y K IF + K W+S+IS
Sbjct: 35 SLPKGLQLHAHIIKLGLQTIPLLSHHLINFYSKTHLPYSSLQIFHDSPHKSATTWSSVIS 94
Query: 302 GYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIF-ESMKSKYLV 360
+AQ L SL F M GV PDD +C + + + ++K+ Y +
Sbjct: 95 SFAQNDLPLLSLNYFRLMLRQGVPPDDHIFPSATKSCGILSSLPVAKMLHCFALKTAYHL 154
Query: 361 EPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
+ + ++D+ + G + A + + MP+ + + W L+
Sbjct: 155 DIFVG--SSVIDMYAKCGDICYAHNVFDEMPYR-NVVSWSGLI 194
>gi|302775568|ref|XP_002971201.1| hypothetical protein SELMODRAFT_94629 [Selaginella moellendorffii]
gi|300161183|gb|EFJ27799.1| hypothetical protein SELMODRAFT_94629 [Selaginella moellendorffii]
Length = 603
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 211/593 (35%), Positives = 339/593 (57%), Gaps = 44/593 (7%)
Query: 12 MVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQ 71
+V+ Y + G +A +F ++ KN SW+ M+ + + DAR +F+ MP+++V A
Sbjct: 51 LVQMYGKCGCPDDAQRVFEEINPKNAYSWSCMMTALASNGYLGDARVMFESMPQRNVSAW 110
Query: 72 TNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEV 131
N++ + Q G + E R D MP+ NV++ + M++ Y N + A + F +M E + V
Sbjct: 111 NNILAAHAQKGYLVEARGFMDRMPEWNVVTLSFMVNAYAQNGHLSEAERAFAMMHEPDVV 170
Query: 132 SWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKD 191
+ T M+M Y Q GR+ DA +F + V+A N+M+ +NG +++AR +FD M +
Sbjct: 171 ARTKMVMAYGQAGRVADAKAVFDRAGARDVIAWNAMLSAYVENGLLREARALFDFMPGRT 230
Query: 192 DATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHA 251
+W+ M++ R G E +LF M P L V SL
Sbjct: 231 VVSWTAMVEACYRGGRFEEAQELFGGM---------PELSEV--------SL-------- 265
Query: 252 QLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFA-SKDIVMWNSIISGYAQYGLGE 310
+V+I Y + G+L + + IF+ A S+++V W ++++ YA +
Sbjct: 266 --------------TVMIEAYAQNGQLQRARGIFEAKADSRNVVSWTAMLTAYADNEDFD 311
Query: 311 KSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACM 370
+ VFH M G+ P+ ++ + +L A S+ G + G + F+SM S + ++P ++HY +
Sbjct: 312 SARMVFHAMLVEGLRPNSISFMSILVASSHLGLLDTGVQYFQSMSSDHGLQPSSDHYQSV 371
Query: 371 VDLLGRAGQVEDAMKLIEAMPFEPDAII---WGSLLGACRTHMKLDLAEVAAKKLLQLEP 427
V LLGR G+++ A +LI+ + GSLLGAC+T+ ++ A +L +LEP
Sbjct: 372 VSLLGRTGELDAAEELIDFQAAGCSGFLEVALGSLLGACKTYRDVERGARVAHRLFELEP 431
Query: 428 KNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSH 487
+NA PY+LL+++YAS G DV +R+ M+ RNV+K PG S IE+++K+H FT D SH
Sbjct: 432 RNASPYVLLASLYASLGMESDVQAVRRLMKDRNVVKQPGISLIEIDRKLHKFTVGD-TSH 490
Query: 488 PEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPE 547
+ I R L ++ L+ + GY PD+ VLHDV EE+K L HSEKLA+A+G++
Sbjct: 491 VRNQEIRRELGRLHELVVKQGYVPDTREVLHDVCEEQKRRLLLNHSEKLAIAFGVISTAP 550
Query: 548 GVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
G IR++KNLRVC DCH+A KL+SKV R+I++RD +RFHHF++G CSC D+W
Sbjct: 551 GTTIRILKNLRVCSDCHAAAKLMSKVTRRKIVIRDCHRFHHFEEGKCSCLDFW 603
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 107/328 (32%), Positives = 172/328 (52%), Gaps = 10/328 (3%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MP+RNV +W ++ + ++G + EA +MPE NVV+ + M+ + ++ + +A R F
Sbjct: 102 MPQRNVSAWNNILAAHAQKGYLVEARGFMDRMPEWNVVTLSFMVNAYAQNGHLSEAERAF 161
Query: 61 DMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARK 120
MM E DVVA+T MV+ Y Q GRV + + +FD ++VI+W M+S YV N + AR
Sbjct: 162 AMMHEPDVVARTKMVMAYGQAGRVADAKAVFDRAGARDVIAWNAMLSAYVENGLLREARA 221
Query: 121 LFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKA 180
LF+ MP + VSWTAM+ + GR ++A ELF MP S V+ MI QNG++Q+A
Sbjct: 222 LFDFMPGRTVVSWTAMVEACYRGGRFEEAQELFGGMPELSEVSLTVMIEAYAQNGQLQRA 281
Query: 181 RVVFD-QMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCAS 239
R +F+ + ++ +W+ M+ Y +F M EG+R N S +S+L +
Sbjct: 282 RGIFEAKADSRNVVSWTAMLTAYADNEDFDSARMVFHAMLVEGLRPNSISFMSILVASSH 341
Query: 240 LASLDHGRQVHAQLVR---CQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDI--- 293
L LD G Q + Q D Y + ++++ + GEL + + D A+
Sbjct: 342 LGLLDTGVQYFQSMSSDHGLQPSSDHYQS--VVSLLGRTGELDAAEELIDFQAAGCSGFL 399
Query: 294 -VMWNSIISGYAQYGLGEKSLKVFHEMF 320
V S++ Y E+ +V H +F
Sbjct: 400 EVALGSLLGACKTYRDVERGARVAHRLF 427
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/287 (20%), Positives = 116/287 (40%), Gaps = 40/287 (13%)
Query: 164 SNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGV 223
+N ++ G+ G A+ VF+++ K+ +WS M+ GY + +F M + V
Sbjct: 48 ANLLVQMYGKCGCPDDAQRVFEEINPKNAYSWSCMMTALASNGYLGDARVMFESMPQRNV 107
Query: 224 RV---------------------------NFPSLISVLSVCASLASLDHGRQVHAQLVRC 256
N +L +++ A L + A +
Sbjct: 108 SAWNNILAAHAQKGYLVEARGFMDRMPEWNVVTLSFMVNAYAQNGHLSEAERAFAMM--- 164
Query: 257 QFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVF 316
+ DV + ++ Y + G + K +FD ++D++ WN+++S Y + GL ++ +F
Sbjct: 165 -HEPDVVARTKMVMAYGQAGRVADAKAVFDRAGARDVIAWNAMLSAYVENGLLREARALF 223
Query: 317 HEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGR 376
M V V+ ++ AC G+ +E +E+F M E M++ +
Sbjct: 224 DFMPGRTV----VSWTAMVEACYRGGRFEEAQELFGGMP-----ELSEVSLTVMIEAYAQ 274
Query: 377 AGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLL 423
GQ++ A + EA + + W ++L A + D A + +L
Sbjct: 275 NGQLQRARGIFEAKADSRNVVSWTAMLTAYADNEDFDSARMVFHAML 321
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 87/216 (40%), Gaps = 44/216 (20%)
Query: 224 RVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFD---VDVYVASVLITMYIKC----- 275
R++ ++ C+ L G++VHA ++ D ++A++L+ MY KC
Sbjct: 4 RLDRDKFAKLVRACSDAKDLARGKRVHAHILDSGGGGVVQDGFLANLLVQMYGKCGCPDD 63
Query: 276 --------------------------GELVKGKLIFDNFASKDIVMWNSIISGYAQYGLG 309
G L +++F++ +++ WN+I++ +AQ G
Sbjct: 64 AQRVFEEINPKNAYSWSCMMTALASNGYLGDARVMFESMPQRNVSAWNNILAAHAQKGYL 123
Query: 310 EKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYAC 369
++ M V VTL +++A + G + E F M EP
Sbjct: 124 VEARGFMDRMPEWNV----VTLSFMVNAYAQNGHLSEAERAFAMMH-----EPDVVARTK 174
Query: 370 MVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
MV G+AG+V DA + + D I W ++L A
Sbjct: 175 MVMAYGQAGRVADAKAVFDRAGAR-DVIAWNAMLSA 209
>gi|449513257|ref|XP_004164277.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 558
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 203/519 (39%), Positives = 300/519 (57%), Gaps = 6/519 (1%)
Query: 87 GREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRI 146
R +F +P + I++ T+I + F + + C R+
Sbjct: 41 ARYVFSRIPSPDTIAYNTIIRSHSRFFPSHSLSYFFSMRSNGIPLDNFTFPFVLKACSRL 100
Query: 147 QDAWELFKAMPM----KSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVY 202
Q L + + N++I G G ++ A VFD+M E+D +WS +I +
Sbjct: 101 QINLHLHSLIVKYGLGSDIFVQNALICVYGYCGSLEMAVKVFDEMSERDSVSWSTVIASF 160
Query: 203 ERKGYELEVIDLFTLMQKEG-VRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVD 261
GY E +DLF MQ E V + +++SV+S + L L+ GR V A + R F V
Sbjct: 161 LNNGYASEALDLFEKMQLEDKVVPDEVTMLSVISAISHLGDLELGRWVRAFIGRLGFGVS 220
Query: 262 VYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFS 321
V + + LI M+ +CG + + ++F+ A ++++ W ++I+G +G ++L +FH M
Sbjct: 221 VALGTALIDMFSRCGSIDESIVVFEKMAVRNVLTWTALINGLGIHGRSMEALAMFHSMRK 280
Query: 322 SGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVE 381
SGV PD VT GVL ACS+ G VKEG +IFES++ Y ++P +HY CMVD+LGRAG +
Sbjct: 281 SGVQPDYVTFSGVLVACSHGGLVKEGWDIFESIRKVYGMDPLLDHYGCMVDILGRAGLLN 340
Query: 382 DAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYA 441
+A +E MP +P++IIW +LLGAC H L LAE K+ ++ G +LLSN+Y
Sbjct: 341 EAYDFVERMPMKPNSIIWRTLLGACVNHNNLGLAEKVKAKISKISSSQNGDLVLLSNVYG 400
Query: 442 SQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIG 501
+ GR+ + A +R MR++ + K PGCS I V++ +H F D SHP+ I + L I
Sbjct: 401 AAGRWVEKASIRSKMREKRIGKEPGCSSINVDQTIHEFVSGDN-SHPQSEDITKFLSSII 459
Query: 502 GLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCG 561
G LR GY + VLHD++EEE+ HSL YHSEKLAVA+ ++ + + IR+MKNLR+C
Sbjct: 460 GDLRNRGYMMQTKNVLHDIEEEEREHSLSYHSEKLAVAFAILSMKDKRTIRIMKNLRICY 519
Query: 562 DCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
DCHS +K IS R+II+RD NRFHHF+ GLCSC DYW
Sbjct: 520 DCHSFMKHISVRFERKIIIRDRNRFHHFEKGLCSCHDYW 558
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 95/185 (51%), Gaps = 17/185 (9%)
Query: 67 DVVAQTNM--VLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEV 124
D+ Q + V GYC G ++ ++FDEM +++ +SW+T+I+ ++NN A LFE
Sbjct: 118 DIFVQNALICVYGYC--GSLEMAVKVFDEMSERDSVSWSTVIASFLNNGYASEALDLFEK 175
Query: 125 MPEK-----NEVSWTAMLMGYTQCGRIQ-DAWELFKAMPMK-----SVVASNSMILGLGQ 173
M + +EV+ +++ + G ++ W +A + SV ++I +
Sbjct: 176 MQLEDKVVPDEVTMLSVISAISHLGDLELGRW--VRAFIGRLGFGVSVALGTALIDMFSR 233
Query: 174 NGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISV 233
G + ++ VVF++M ++ TW+ +I G +E + +F M+K GV+ ++ + V
Sbjct: 234 CGSIDESIVVFEKMAVRNVLTWTALINGLGIHGRSMEALAMFHSMRKSGVQPDYVTFSGV 293
Query: 234 LSVCA 238
L C+
Sbjct: 294 LVACS 298
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 84/169 (49%), Gaps = 13/169 (7%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLF--WQMPEKNVVSWTVMLGGFIRDSRIDDAR- 57
M ER+ VSW+ ++ ++ G +EA LF Q+ +K V ML S + D
Sbjct: 145 MSERDSVSWSTVIASFLNNGYASEALDLFEKMQLEDKVVPDEVTMLSVISAISHLGDLEL 204
Query: 58 ----RLF--DMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVN 111
R F + V T ++ + + G +DE +F++M +NV++WT +I+G
Sbjct: 205 GRWVRAFIGRLGFGVSVALGTALIDMFSRCGSIDESIVVFEKMAVRNVLTWTALINGLGI 264
Query: 112 NNRIDVARKLFEVMP----EKNEVSWTAMLMGYTQCGRIQDAWELFKAM 156
+ R A +F M + + V+++ +L+ + G +++ W++F+++
Sbjct: 265 HGRSMEALAMFHSMRKSGVQPDYVTFSGVLVACSHGGLVKEGWDIFESI 313
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 89/190 (46%), Gaps = 15/190 (7%)
Query: 13 VRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDV---- 68
V GY G + A +F +M E++ VSW+ ++ F+ + +A LF+ M +D
Sbjct: 128 VYGYC--GSLEMAVKVFDEMSERDSVSWSTVIASFLNNGYASEALDLFEKMQLEDKVVPD 185
Query: 69 -VAQTNMVLGYCQDGRVDEGREIFDEMPK----KNVISWTTMISGYVNNNRIDVARKLFE 123
V +++ G ++ GR + + + +V T +I + ID + +FE
Sbjct: 186 EVTMLSVISAISHLGDLELGRWVRAFIGRLGFGVSVALGTALIDMFSRCGSIDESIVVFE 245
Query: 124 VMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSV----VASNSMILGLGQNGEVQK 179
M +N ++WTA++ G GR +A +F +M V V + +++ G V++
Sbjct: 246 KMAVRNVLTWTALINGLGIHGRSMEALAMFHSMRKSGVQPDYVTFSGVLVACSHGGLVKE 305
Query: 180 ARVVFDQMRE 189
+F+ +R+
Sbjct: 306 GWDIFESIRK 315
>gi|224129622|ref|XP_002328762.1| predicted protein [Populus trichocarpa]
gi|222839060|gb|EEE77411.1| predicted protein [Populus trichocarpa]
Length = 632
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 214/597 (35%), Positives = 336/597 (56%), Gaps = 55/597 (9%)
Query: 22 ITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRI--DDARRLFDMMPEKDVVAQTNM---VL 76
+T A LF +P+ + + ++ GF+ + + L+ M + V+ +L
Sbjct: 73 LTYALKLFDSIPQPDAFLYNTIIKGFLHSQLLPTNSILLLYSHMLQNSVLPNNFTFPSLL 132
Query: 77 GYCQDGRVDEGREIFDEMPK----KNVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVS 132
C+ ++ G +I + K + + ++I YV ++ AR++F +P + VS
Sbjct: 133 IACR--KIQHGMQIHAHLFKFGFGAHSVCLNSLIHMYVTFQALEEARRVFHTIPHPDSVS 190
Query: 133 WTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDD 192
WT+++ GY++ G I +A+ +F+ MP K+ + N+M+ Q +A +FD+M+ +++
Sbjct: 191 WTSLISGYSKWGLIDEAFTIFQLMPQKNSASWNAMMAAYVQTNRFHEAFALFDRMKAENN 250
Query: 193 ATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQ 252
V+D F ++LS C L +LD G+ +H
Sbjct: 251 -----------------NVLDKFVA-------------TTMLSACTGLGALDQGKWIHEY 280
Query: 253 LVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFA--SKDIVMWNSIISGYAQYGLGE 310
+ R ++D + + ++ MY KCG L K +F + + I WN +I G A +G GE
Sbjct: 281 IKRNGIELDSKLTTAIVDMYCKCGCLEKALQVFHSLPLPCRWISSWNCMIGGLAMHGNGE 340
Query: 311 KSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACM 370
++++F EM V PDD+T + +L+AC+++G V+EGR F M Y +EP+ EH+ CM
Sbjct: 341 AAIQLFKEMERQRVAPDDITFLNLLTACAHSGLVEEGRNYFSYMIRVYGIEPRMEHFGCM 400
Query: 371 VDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNA 430
VDLLGRAG V +A KLI+ MP PD + G+LLGAC+ H ++L E +++++LEP N+
Sbjct: 401 VDLLGRAGMVPEARKLIDEMPVSPDVTVLGTLLGACKKHRNIELGEEIGRRVIELEPNNS 460
Query: 431 GPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPE- 489
G Y+LL+N+YA+ G++ D A++RK M R V K PG S IE++ VH F + +HP+
Sbjct: 461 GRYVLLANLYANAGKWEDAAKVRKLMDDRGVKKAPGFSMIELQGTVHEFIAGE-RNHPQA 519
Query: 490 ---HPMIMRMLEKIGGLLREAGYCPDSSFVL--HDVDEEEK-VHSLRYHSEKLAVAYGLV 543
H + MLE L+ GY D++ VL HD DEEE + L YHSEKLA+A+GL
Sbjct: 520 KELHAKVYEMLEH----LKSVGYVADTNGVLHGHDFDEEEDGENPLYYHSEKLAIAFGLS 575
Query: 544 KLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
+ G +R++KNLR+C DCH A KLIS V REII+RD RFH FK G CSC+DYW
Sbjct: 576 RTKPGETLRILKNLRICEDCHHACKLISTVFDREIIVRDRTRFHRFKMGQCSCQDYW 632
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 92/398 (23%), Positives = 163/398 (40%), Gaps = 102/398 (25%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
+P + VSWT+++ GY + G+I EA T+F MP+KN SW M+ +++ +R +A LF
Sbjct: 183 IPHPDSVSWTSLISGYSKWGLIDEAFTIFQLMPQKNSASWNAMMAAYVQTNRFHEAFALF 242
Query: 61 DMMPEK-----DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRI 115
D M + D T M+ G +D+G+ W I Y+ N I
Sbjct: 243 DRMKAENNNVLDKFVATTMLSACTGLGALDQGK-------------W---IHEYIKRNGI 286
Query: 116 DVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPM--KSVVASNSMILGLGQ 173
++ KL TA++ Y +CG ++ A ++F ++P+ + + + N MI GL
Sbjct: 287 ELDSKL-----------TTAIVDMYCKCGCLEKALQVFHSLPLPCRWISSWNCMIGGLAM 335
Query: 174 NGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISV 233
+G + A I LF M+++ V + + +++
Sbjct: 336 HGNGEAA-------------------------------IQLFKEMERQRVAPDDITFLNL 364
Query: 234 LSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDI 293
L+ CA ++ GR + ++R VY + +
Sbjct: 365 LTACAHSGLVEEGRNYFSYMIR------VYGIEPRMEHF--------------------- 397
Query: 294 VMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFES 353
++ + G+ ++ K+ EM V PD L +L AC ++ G EI
Sbjct: 398 ---GCMVDLLGRAGMVPEARKLIDEM---PVSPDVTVLGTLLGACKKHRNIELGEEIGRR 451
Query: 354 MKSKYLVEPKTE-HYACMVDLLGRAGQVEDAMKLIEAM 390
+ +EP Y + +L AG+ EDA K+ + M
Sbjct: 452 VIE---LEPNNSGRYVLLANLYANAGKWEDAAKVRKLM 486
>gi|359491266|ref|XP_002280289.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 663
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 195/467 (41%), Positives = 289/467 (61%), Gaps = 11/467 (2%)
Query: 140 YTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMI 199
Y+ R+ DA +F MP + V+ S++ G GE+ +AR +FD M ++D +W+ M+
Sbjct: 202 YSIFSRMVDAKRVFDEMPQRDVITWTSVVKGYAMRGELVRARELFDMMPGRNDVSWAVMV 261
Query: 200 KVYERKGYELEVIDLFT-LMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQF 258
Y + E + F ++ + V+ N L+S+LS CA L +LD G+ +H + + +
Sbjct: 262 AGYVGHRFYNEALQCFNDMLCHDEVKPNEAVLVSILSACAHLGALDQGKWIHVYIDKNRI 321
Query: 259 DVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHE 318
+ +++ LI MY KCG + + +FD +D++ W S+ISG + +GLG + L F E
Sbjct: 322 LLSSNISTALIDMYAKCGRIDCARRVFDGLHKRDLLTWTSMISGLSMHGLGAECLWTFSE 381
Query: 319 MFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAG 378
M + G PDD+TL+GVL+ CS++G V+EG IF M + + PK EHY C++DLLGRAG
Sbjct: 382 MLAEGFKPDDITLLGVLNGCSHSGLVEEGLSIFHDMIPLWGIVPKLEHYGCLIDLLGRAG 441
Query: 379 QVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEP-KNAGPYILLS 437
++E A + I++MP EPD + W +LL ACR H +DL E + +L P + G Y+LLS
Sbjct: 442 RLESAFEAIKSMPMEPDVVAWRALLSACRIHGDVDLGERIINHIAELCPGSHGGGYVLLS 501
Query: 438 NIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRML 497
N+YAS G++ V ++RK M +R PGCSWIE++ VH F D + HP I +
Sbjct: 502 NLYASMGQWESVTKVRKAMSQRGSEGCPGCSWIEIDGVVHEFLAADKL----HPRISEIN 557
Query: 498 EKIGGLLR----EAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRV 553
+K+ +LR E GY P + VL D++EE+K ++ +HSEKLAVA+GL+ EG IR+
Sbjct: 558 KKLNEVLRRISIEGGYVPSTKQVLFDLNEEDKEQAVSWHSEKLAVAFGLLSTQEGT-IRI 616
Query: 554 MKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
KNLR C DCHSA+K IS V REI++RD +RFH F+ G CSC DYW
Sbjct: 617 TKNLRTCEDCHSAMKTISLVFNREIVVRDRSRFHTFRYGNCSCTDYW 663
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 107/398 (26%), Positives = 168/398 (42%), Gaps = 69/398 (17%)
Query: 13 VRGYVE--EGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVA 70
+RGY E GM+ + G E ++ ++ + SR+ DA+R+FD MP++DV+
Sbjct: 172 LRGYGENVHGMVVKDGY------ESDIFVGNSLVNMYSIFSRMVDAKRVFDEMPQRDVIT 225
Query: 71 QTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLF-------E 123
T++V GY G + RE+FD MP +N +SW M++GYV + + A + F E
Sbjct: 226 WTSVVKGYAMRGELVRARELFDMMPGRNDVSWAVMVAGYVGHRFYNEALQCFNDMLCHDE 285
Query: 124 VMPEKNEVSWTAMLMGYTQCGRI-QDAW---ELFKAMPMKSVVASNSMILGLGQNGEVQK 179
V P NE ++L G + Q W + K + S S ++I + G +
Sbjct: 286 VKP--NEAVLVSILSACAHLGALDQGKWIHVYIDKNRILLSSNISTALIDMYAKCGRIDC 343
Query: 180 ARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCAS 239
AR VFD + ++D TW+ MI G E + F+ M EG + + +L+ VL+ C+
Sbjct: 344 ARRVFDGLHKRDLLTWTSMISGLSMHGLGAECLWTFSEMLAEGFKPDDITLLGVLNGCS- 402
Query: 240 LASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSI 299
H+ LV +G IF + I +W I
Sbjct: 403 ----------HSGLVE------------------------EGLSIFHDM----IPLWG-I 423
Query: 300 ISGYAQYG-----LGEKSL--KVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFE 352
+ YG LG F + S + PD V +LSAC G V G I
Sbjct: 424 VPKLEHYGCLIDLLGRAGRLESAFEAIKSMPMEPDVVAWRALLSACRIHGDVDLGERIIN 483
Query: 353 SMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAM 390
+ ++ Y + +L GQ E K+ +AM
Sbjct: 484 HI-AELCPGSHGGGYVLLSNLYASMGQWESVTKVRKAM 520
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 100/200 (50%), Gaps = 13/200 (6%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MP+R+V++WT++V+GY G + A LF MP +N VSW VM+ G++ ++A + F
Sbjct: 218 MPQRDVITWTSVVKGYAMRGELVRARELFDMMPGRNDVSWAVMVAGYVGHRFYNEALQCF 277
Query: 61 DMMPEKDVVAQTNMVL-----GYCQDGRVDEGREIFDEMPKKNVI----SWTTMISGYVN 111
+ M D V VL G +D+G+ I + K ++ T +I Y
Sbjct: 278 NDMLCHDEVKPNEAVLVSILSACAHLGALDQGKWIHVYIDKNRILLSSNISTALIDMYAK 337
Query: 112 NNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGL 171
RID AR++F+ + +++ ++WT+M+ G + G + F M + + +LG+
Sbjct: 338 CGRIDCARRVFDGLHKRDLLTWTSMISGLSMHGLGAECLWTFSEMLAEGFKPDDITLLGV 397
Query: 172 ----GQNGEVQKARVVFDQM 187
+G V++ +F M
Sbjct: 398 LNGCSHSGLVEEGLSIFHDM 417
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 106/227 (46%), Gaps = 15/227 (6%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDM 62
E ++ ++V Y + +A +F +MP+++V++WT ++ G+ + AR LFDM
Sbjct: 189 ESDIFVGNSLVNMYSIFSRMVDAKRVFDEMPQRDVITWTSVVKGYAMRGELVRARELFDM 248
Query: 63 MPEKDVVAQTNMVLGYCQDGRVDEGREIFDEM-----PKKNVISWTTMISGYVNNNRIDV 117
MP ++ V+ MV GY +E + F++M K N +++S + +D
Sbjct: 249 MPGRNDVSWAVMVAGYVGHRFYNEALQCFNDMLCHDEVKPNEAVLVSILSACAHLGALDQ 308
Query: 118 ARKLFEVMPEKNEVSW-----TAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLG 172
K V +KN + TA++ Y +CGRI A +F + + ++ SMI GL
Sbjct: 309 G-KWIHVYIDKNRILLSSNISTALIDMYAKCGRIDCARRVFDGLHKRDLLTWTSMISGLS 367
Query: 173 QNGEVQKARVVFDQMR----EKDDATWSGMIKVYERKGYELEVIDLF 215
+G + F +M + DD T G++ G E + +F
Sbjct: 368 MHGLGAECLWTFSEMLAEGFKPDDITLLGVLNGCSHSGLVEEGLSIF 414
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 109/243 (44%), Gaps = 9/243 (3%)
Query: 226 NFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIF 285
+ PS + + + SL +Q+HAQ+V + + LI YI C L +++F
Sbjct: 51 SLPSHSTFVQLLKKRPSLTQIKQIHAQVVTHGLAQNTSLLGPLIHSYIGCRNLSFARIVF 110
Query: 286 DNFAS-KDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSG--VMPDDVTLVGVLSACSYTG 342
D F S ++WN +I Y++ ++SL +FH+M + G D T V +ACS
Sbjct: 111 DQFPSLPPTIIWNLMIQAYSKTPSSQESLYLFHQMLAHGRPTSADKYTFTFVFTACSRHP 170
Query: 343 KVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSL 402
++ E M K E +V++ ++ DA ++ + MP + D I W S+
Sbjct: 171 TLRGYGENVHGMVVKDGYESDIFVGNSLVNMYSIFSRMVDAKRVFDEMP-QRDVITWTSV 229
Query: 403 LGACRTHMKLDLAEVAAKKLLQLEP-KNAGPYILLSNIYASQGRFHDVAELRKNMRKRNV 461
+ +L V A++L + P +N + ++ Y +++ + +M +
Sbjct: 230 VKGYAMRGEL----VRARELFDMMPGRNDVSWAVMVAGYVGHRFYNEALQCFNDMLCHDE 285
Query: 462 IKP 464
+KP
Sbjct: 286 VKP 288
>gi|108864632|gb|ABG22571.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 692
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 201/572 (35%), Positives = 337/572 (58%), Gaps = 15/572 (2%)
Query: 41 TVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEM------ 94
++ + + + DA LFD P +D+ ++++ + I M
Sbjct: 124 AALVSAYAKSRLLPDALHLFDETPRRDIYIYSSLLTAVSHSASPELALPILRCMLSADAL 183
Query: 95 -PKKNVISWTTMISGYVNNNRIDVARKL---FEVMP-EKNEVSWTAMLMGYTQCGRIQDA 149
P VIS + + + R+ R+L F V P ++V ++++ Y +CG D
Sbjct: 184 HPDHFVISSVASVFARLRSRRL--GRQLHAHFVVSPYNGDDVVKSSLVDMYCKCGSPDDG 241
Query: 150 WELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYEL 209
++F +M K+ V +++ G NG ++A +F M ++ W+ +I G +
Sbjct: 242 RKVFDSMSAKNSVVWTALVSGYASNGRSEEALQLFRSMPGRNLFAWTALISGLVNTGESV 301
Query: 210 EVIDLFTLMQKEGVRVNFPSLIS-VLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVL 268
++LF M+++GVR++ ++S V+ A LA+ GRQ+H +R F ++ V + L
Sbjct: 302 GAVELFVEMRRDGVRIDDAFVLSIVIGGSADLAAFVLGRQLHGSTMRLGFLSNMIVGNAL 361
Query: 269 ITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDD 328
I MY KC +++ + +F+ +D++ W +++ G AQ+G E++L ++ M +G P++
Sbjct: 362 IDMYSKCSDILSAREVFEGITFRDVISWTTMVVGEAQHGRAEEALALYDRMVLAGAKPNE 421
Query: 329 VTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIE 388
VT VG++ ACS+ G V++GR++FESMK++Y + P+ +HY C +DLL R+G + +A +L+
Sbjct: 422 VTFVGLIYACSHAGLVQKGRQLFESMKNEYGITPRLQHYTCYLDLLSRSGHLLEAEELMT 481
Query: 389 AMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHD 448
MP+EPD WG+LL AC + ++ + KLL+L PK++ YILLSN+YA G++
Sbjct: 482 TMPYEPDEATWGALLSACTKYKDAEMCIRISDKLLELRPKDSSTYILLSNVYAVNGKWDS 541
Query: 449 VAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAG 508
VA++RK M + K PG SWIE ++ +F + V IM LE++ +R+ G
Sbjct: 542 VAKVRKCMIGLEIRKEPGYSWIEAGREFRLFHAGE-VPLDVREEIMVFLEEMVLEMRKRG 600
Query: 509 YCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIK 568
Y PD+S V+HD++E EK H L HSE+LAVA+GL+K P G IRV+KNLRVC DCH+ +K
Sbjct: 601 YVPDTSSVMHDLEESEKEHHLFLHSERLAVAFGLIKSPPGSVIRVVKNLRVCVDCHTVMK 660
Query: 569 LISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
LIS++ R+I++RD++RFHHF+ G CSC ++W
Sbjct: 661 LISEITHRKIVVRDSSRFHHFEGGKCSCSEFW 692
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 113/253 (44%), Gaps = 18/253 (7%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
M +N V WTA+V GY G EA LF MP +N+ +WT ++ G + A LF
Sbjct: 248 MSAKNSVVWTALVSGYASNGRSEEALQLFRSMPGRNLFAWTALISGLVNTGESVGAVELF 307
Query: 61 DMMPEKDVVAQTNMVLGYCQDGRVD-----EGREIFDEMPK----KNVISWTTMISGYVN 111
M V VL G D GR++ + N+I +I Y
Sbjct: 308 VEMRRDGVRIDDAFVLSIVIGGSADLAAFVLGRQLHGSTMRLGFLSNMIVGNALIDMYSK 367
Query: 112 NNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGL 171
+ I AR++FE + ++ +SWT M++G Q GR ++A L+ M + + +GL
Sbjct: 368 CSDILSAREVFEGITFRDVISWTTMVVGEAQHGRAEEALALYDRMVLAGAKPNEVTFVGL 427
Query: 172 ----GQNGEVQKARVVFDQMREKDDAT-----WSGMIKVYERKGYELEVIDLFTLMQKEG 222
G VQK R +F+ M+ + T ++ + + R G+ LE +L T M E
Sbjct: 428 IYACSHAGLVQKGRQLFESMKNEYGITPRLQHYTCYLDLLSRSGHLLEAEELMTTMPYEP 487
Query: 223 VRVNFPSLISVLS 235
+ +L+S +
Sbjct: 488 DEATWGALLSACT 500
Score = 45.1 bits (105), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 42/219 (19%), Positives = 97/219 (44%), Gaps = 12/219 (5%)
Query: 247 RQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQY 306
R +HA++++ + L++ Y K L +FD +DI +++S+++ +
Sbjct: 105 RGMHARILKEGLAHHPPNPAALVSAYAKSRLLPDALHLFDETPRRDIYIYSSLLTAVSHS 164
Query: 307 GLGEKSLKVFHEMFSSGVM-PDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTE 365
E +L + M S+ + PD + V S + + GR+ + + ++V P
Sbjct: 165 ASPELALPILRCMLSADALHPDHFVISSVASVFARLRSRRLGRQ----LHAHFVVSPYNG 220
Query: 366 H---YACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKL 422
+ +VD+ + G +D K+ ++M + ++++W +L+ ++ + +E A +
Sbjct: 221 DDVVKSSLVDMYCKCGSPDDGRKVFDSMSAK-NSVVWTALVSGYASNGR---SEEALQLF 276
Query: 423 LQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNV 461
+ +N + L + + G EL MR+ V
Sbjct: 277 RSMPGRNLFAWTALISGLVNTGESVGAVELFVEMRRDGV 315
>gi|297850056|ref|XP_002892909.1| hypothetical protein ARALYDRAFT_889039 [Arabidopsis lyrata subsp.
lyrata]
gi|297338751|gb|EFH69168.1| hypothetical protein ARALYDRAFT_889039 [Arabidopsis lyrata subsp.
lyrata]
Length = 1038
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 208/641 (32%), Positives = 341/641 (53%), Gaps = 53/641 (8%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMM------ 63
++R Y G EA +F QMP K+++SW ++ F+ D R DA + M
Sbjct: 401 NTLLRMYAGAGRSEEADLVFKQMPTKDLISWNSLMASFVNDGRSLDALGILCSMIRTGKS 460
Query: 64 ---------------PE------------------KDVVAQTNMVLGYCQDGRVDEGREI 90
PE + + +V Y + G + R +
Sbjct: 461 VNYVTFTSALAACFSPEFFDKGRILHGLVVVSGLFDNQIIGNALVSMYGKIGGMSTSRRV 520
Query: 91 FDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMP-EKNEVSWTAMLMGYTQCGRIQDA 149
+MP+++V++W +I GY N D A F+ + E ++ ++ + C D
Sbjct: 521 LLQMPRRDVVAWNALIGGYAENEDPDKALAAFQTLRVEGVSANYITVVSVLSACLVPGDL 580
Query: 150 WELFKAMPMKSVVAS----------NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMI 199
E + P+ + + S NS+I + G++ ++ +F+ + + TW+ ++
Sbjct: 581 LE--RGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRSIITWNAIL 638
Query: 200 KVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFD 259
G+ EV+ L + M+ G+ ++ S LS A LA L+ G+Q+H V+ F+
Sbjct: 639 AANAHHGHGEEVLKLVSKMRSFGLSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFE 698
Query: 260 VDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEM 319
+D ++ + MY KCGE+ + + ++ + WN +IS ++G E+ + FHEM
Sbjct: 699 LDCFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCETFHEM 758
Query: 320 FSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQ 379
G+ P VT V +L+ACS+ G V +G ++ + + +EP EH C++DLLGR+G+
Sbjct: 759 LEMGIKPGHVTFVSLLTACSHGGLVDQGLAYYDMIAKDFGLEPAIEHCICVIDLLGRSGR 818
Query: 380 VEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNI 439
+ +A I MP +P+ ++W SLL +C+ H LD AA+ L +LEP++ ++L SN+
Sbjct: 819 LAEAETFISKMPMKPNDLVWRSLLASCKIHRDLDRGRKAAENLSKLEPEDDSVFVLSSNM 878
Query: 440 YASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEK 499
+A+ GR+ DV +RK M +N+ K CSW++++ KV F D +HP+ I LE
Sbjct: 879 FATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGD-RTHPQTMEIYAKLED 937
Query: 500 IGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRV 559
I L++E+GY D+S L D DEE+K H+L HSE+LA+AY L+ PEG +R+ KNLR+
Sbjct: 938 IKKLIKESGYVADTSQALQDTDEEQKEHNLWNHSERLALAYALMSTPEGSTVRIFKNLRI 997
Query: 560 CGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
C DCHS K +S+V+GR I+LRD RFHHF+ GLCSC+DYW
Sbjct: 998 CSDCHSVYKFVSRVIGRRIVLRDQYRFHHFESGLCSCKDYW 1038
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 123/490 (25%), Positives = 227/490 (46%), Gaps = 61/490 (12%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMM- 63
+V+ ++ Y + G + A LF +MP +N VSW M+ G +R + F M
Sbjct: 92 SVLHTNTLINMYTKFGRVKPARYLFDKMPVRNEVSWNTMMSGIVRVGLYLEGMEFFQKMC 151
Query: 64 -----PEKDVVAQTNMVLGYCQDGRV-DEGREIFDEMPKKNVIS----WTTMISGYVNNN 113
P V+A ++V + G + EG ++ + K ++S T ++ Y
Sbjct: 152 DLGIKPSSFVIA--SLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYG 209
Query: 114 RIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAM----------PMKSVVA 163
+ +RK+FE MP++N VSWT++++GY+ G ++ +++K+M M V++
Sbjct: 210 LVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKSMRGEGVECNENSMSLVIS 269
Query: 164 S-----------------------------NSMILGLGQNGEVQKARVVFDQMREKDDAT 194
S NS+I G G V A +F+Q+ E+D +
Sbjct: 270 SCGLLKDESLGRQIIGQVIKSGLESKLAVENSLISMFGNMGNVDYANYIFNQISERDTIS 329
Query: 195 WSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDH---GRQVHA 251
W+ ++ Y + G+ E +F LM++ VN ++ ++LSV L +DH GR +H
Sbjct: 330 WNSIVAAYAQNGHIEESSRIFNLMRRFHDEVNSTTVSTLLSV---LGDVDHQKWGRGIHG 386
Query: 252 QLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEK 311
+V+ FD V V + L+ MY G + L+F +KD++ WNS+++ + G
Sbjct: 387 LVVKMGFDSVVCVCNTLLRMYAGAGRSEEADLVFKQMPTKDLISWNSLMASFVNDGRSLD 446
Query: 312 SLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMV 371
+L + M +G + VT L+AC +GR + + L + + A +V
Sbjct: 447 ALGILCSMIRTGKSVNYVTFTSALAACFSPEFFDKGRILHGLVVVSGLFDNQIIGNA-LV 505
Query: 372 DLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAG 431
+ G+ G + + +++ MP D + W +L+G + D A +AA + L++E +A
Sbjct: 506 SMYGKIGGMSTSRRVLLQMP-RRDVVAWNALIGGYAENEDPDKA-LAAFQTLRVEGVSAN 563
Query: 432 PYILLSNIYA 441
++S + A
Sbjct: 564 YITVVSVLSA 573
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 103/427 (24%), Positives = 197/427 (46%), Gaps = 21/427 (4%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMP------EKNVVSWTVMLGGFIRDSRID 54
MP+RNVVSWT+++ GY ++G E ++ M +N +S + G ++D +
Sbjct: 221 MPDRNVVSWTSLMVGYSDKGEPEEVIDIYKSMRGEGVECNENSMSLVISSCGLLKDESL- 279
Query: 55 DARRLFDMMP----EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYV 110
R++ + E + + +++ + G VD IF+++ +++ ISW ++++ Y
Sbjct: 280 -GRQIIGQVIKSGLESKLAVENSLISMFGNMGNVDYANYIFNQISERDTISWNSIVAAYA 338
Query: 111 NNNRIDVARKLFEVMPE-KNEVSWTAMLMGYTQCGRI-QDAWE-----LFKAMPMKSVVA 163
N I+ + ++F +M +EV+ T + + G + W L M SVV
Sbjct: 339 QNGHIEESSRIFNLMRRFHDEVNSTTVSTLLSVLGDVDHQKWGRGIHGLVVKMGFDSVVC 398
Query: 164 -SNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEG 222
N+++ G ++A +VF QM KD +W+ ++ + G L+ + + M + G
Sbjct: 399 VCNTLLRMYAGAGRSEEADLVFKQMPTKDLISWNSLMASFVNDGRSLDALGILCSMIRTG 458
Query: 223 VRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGK 282
VN+ + S L+ C S D GR +H +V + + + L++MY K G + +
Sbjct: 459 KSVNYVTFTSALAACFSPEFFDKGRILHGLVVVSGLFDNQIIGNALVSMYGKIGGMSTSR 518
Query: 283 LIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTG 342
+ +D+V WN++I GYA+ +K+L F + GV + +T+V VLSAC G
Sbjct: 519 RVLLQMPRRDVVAWNALIGGYAENEDPDKALAAFQTLRVEGVSANYITVVSVLSACLVPG 578
Query: 343 KVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSL 402
+ E + + E ++ + + G + + L + I W ++
Sbjct: 579 DLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLD-NRSIITWNAI 637
Query: 403 LGACRTH 409
L A H
Sbjct: 638 LAANAHH 644
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 109/390 (27%), Positives = 176/390 (45%), Gaps = 58/390 (14%)
Query: 64 PEKDVVAQTNMVLGYCQDGRVDEGREI----FDEMPKKNVISWTTMISGYVNNNRIDVAR 119
PE QT G+ Q R GR + + + +V+ T+I+ Y R+ AR
Sbjct: 58 PELSCFDQT----GFSQITRETTGRALHALCVKGLVRLSVLHTNTLINMYTKFGRVKPAR 113
Query: 120 KLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAM------PMKSVVAS--------- 164
LF+ MP +NEVSW M+ G + G + E F+ M P V+AS
Sbjct: 114 YLFDKMPVRNEVSWNTMMSGIVRVGLYLEGMEFFQKMCDLGIKPSSFVIASLVTACGRSG 173
Query: 165 ------------------------NSMILGL-GQNGEVQKARVVFDQMREKDDATWSGMI 199
++ IL L G G V +R VF++M +++ +W+ ++
Sbjct: 174 SMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLM 233
Query: 200 KVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFD 259
Y KG EVID++ M+ EGV N S+ V+S C L GRQ+ Q+++ +
Sbjct: 234 VGYSDKGEPEEVIDIYKSMRGEGVECNENSMSLVISSCGLLKDESLGRQIIGQVIKSGLE 293
Query: 260 VDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEM 319
+ V + LI+M+ G + IF+ + +D + WNSI++ YAQ G E+S ++F+ M
Sbjct: 294 SKLAVENSLISMFGNMGNVDYANYIFNQISERDTISWNSIVAAYAQNGHIEESSRIFNLM 353
Query: 320 FSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGR--- 376
+ T+ +LS K GR I +V+ + C+ + L R
Sbjct: 354 RRFHDEVNSTTVSTLLSVLGDVDHQKWGRGI-----HGLVVKMGFDSVVCVCNTLLRMYA 408
Query: 377 -AGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
AG+ E+A + + MP D I W SL+ +
Sbjct: 409 GAGRSEEADLVFKQMP-TKDLISWNSLMAS 437
>gi|449434296|ref|XP_004134932.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
gi|449479547|ref|XP_004155632.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 638
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 202/557 (36%), Positives = 327/557 (58%), Gaps = 11/557 (1%)
Query: 54 DDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEM-------PKKNVISWTTMI 106
D A +++ + V A NM+ + + ++ M P K+ +++
Sbjct: 83 DYALSIYNSISHPTVFATNNMIRCFVKGDLPRHSISLYSHMCRSFVAAPNKHTLTFVLQA 142
Query: 107 --SGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPM-KSVVA 163
+ + V + ++ K+ A++ Y C R++ A ++F +P + VV+
Sbjct: 143 CSNAFAIREGAQVQTHVIKLGFVKDVFVRNALIHLYCTCCRVESAKQVFDEVPSSRDVVS 202
Query: 164 SNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGV 223
NSMI+G + G++ A+ +F +M EKD +W +I + G + +D F + ++ +
Sbjct: 203 WNSMIVGFVRLGQISVAQKLFVEMPEKDVISWGTIISGCVQNGELEKALDYFKELGEQKL 262
Query: 224 RVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKL 283
R N L+S+L+ A L +L++G+++H+ +F + + + L+ MY KCG + + +
Sbjct: 263 RPNEAILVSLLAAAAQLGTLEYGKRIHSIANSLRFPMTASLGTALVDMYAKCGCIDESRF 322
Query: 284 IFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGK 343
+FD KD WN +I G A +GLG+++L +F + + G P +VT +GVL+ACS G
Sbjct: 323 LFDRMPEKDKWSWNVMICGLATHGLGQEALALFEKFLTQGFHPVNVTFIGVLTACSRAGL 382
Query: 344 VKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
V EG+ F+ M Y +EP+ EHY CMVDLL RAG V DA+++I MP PD ++W S+L
Sbjct: 383 VSEGKHFFKLMTDTYGIEPEMEHYGCMVDLLSRAGFVYDAVEMINRMPAPPDPVLWASVL 442
Query: 404 GACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIK 463
G+C+ H ++L E KL+Q++P + G Y+ L+ I+A ++ DV+++R+ M +RN K
Sbjct: 443 GSCQVHGFIELGEEIGNKLIQMDPTHNGHYVQLARIFARLRKWEDVSKVRRLMAERNSNK 502
Query: 464 PPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEE 523
G S IE E +VH F D H I +MLE +G + AGY + S VLHD++EE
Sbjct: 503 IAGWSLIEAEGRVHRFVAGD-KEHERTTEIYKMLEIMGVRIAAAGYSANVSSVLHDIEEE 561
Query: 524 EKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDA 583
EK ++++ HSE+LA+A+GL+ +G IR++KNLRVCGDCH K+IS V REII+RD
Sbjct: 562 EKENAIKEHSERLAIAFGLLVTKDGDCIRIIKNLRVCGDCHEVSKIISLVFEREIIVRDG 621
Query: 584 NRFHHFKDGLCSCRDYW 600
+RFHHFK G+CSC+DYW
Sbjct: 622 SRFHHFKKGICSCQDYW 638
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 124/270 (45%), Gaps = 22/270 (8%)
Query: 4 RNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMM 63
R+VVSW +M+ G+V G I+ A LF +MPEK+V+SW ++ G +++ ++ A F +
Sbjct: 198 RDVVSWNSMIVGFVRLGQISVAQKLFVEMPEKDVISWGTIISGCVQNGELEKALDYFKEL 257
Query: 64 PEKDVVAQ----TNMVLGYCQDGRVDEGREIFD-----EMPKKNVISWTTMISGYVNNNR 114
E+ + +++ Q G ++ G+ I P + T ++ Y
Sbjct: 258 GEQKLRPNEAILVSLLAAAAQLGTLEYGKRIHSIANSLRFPMTASLG-TALVDMYAKCGC 316
Query: 115 IDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGL--- 171
ID +R LF+ MPEK++ SW M+ G G Q+A LF+ + N +G+
Sbjct: 317 IDESRFLFDRMPEKDKWSWNVMICGLATHGLGQEALALFEKFLTQGFHPVNVTFIGVLTA 376
Query: 172 -GQNGEVQKARVVFDQMR-----EKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRV 225
+ G V + + F M E + + M+ + R G+ + +++ M V
Sbjct: 377 CSRAGLVSEGKHFFKLMTDTYGIEPEMEHYGCMVDLLSRAGFVYDAVEMINRMPAPPDPV 436
Query: 226 NFPSLISVLSVCASLASLDHGRQVHAQLVR 255
+ SVL C ++ G ++ +L++
Sbjct: 437 LWA---SVLGSCQVHGFIELGEEIGNKLIQ 463
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 77/169 (45%), Gaps = 14/169 (8%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEK----NVVSWTVMLGGFIRDSRIDDA 56
MPE++V+SW ++ G V+ G + +A F ++ E+ N +L + ++
Sbjct: 226 MPEKDVISWGTIISGCVQNGELEKALDYFKELGEQKLRPNEAILVSLLAAAAQLGTLEYG 285
Query: 57 RRLFDM-----MPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVN 111
+R+ + P + T +V Y + G +DE R +FD MP+K+ SW MI G
Sbjct: 286 KRIHSIANSLRFPMTASLG-TALVDMYAKCGCIDESRFLFDRMPEKDKWSWNVMICGLAT 344
Query: 112 NNRIDVARKLFEVMPEKN----EVSWTAMLMGYTQCGRIQDAWELFKAM 156
+ A LFE + V++ +L ++ G + + FK M
Sbjct: 345 HGLGQEALALFEKFLTQGFHPVNVTFIGVLTACSRAGLVSEGKHFFKLM 393
>gi|224061617|ref|XP_002300569.1| predicted protein [Populus trichocarpa]
gi|222847827|gb|EEE85374.1| predicted protein [Populus trichocarpa]
Length = 568
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 215/556 (38%), Positives = 326/556 (58%), Gaps = 28/556 (5%)
Query: 47 FIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMI 106
+ R + DAR+LFD MP +D + M+ GYCQ+G E +I DEM + V
Sbjct: 39 YSRFGLVGDARKLFDDMPARDRGSWNAMISGYCQNGNAAEALDIADEMRLEGV------- 91
Query: 107 SGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNS 166
++D A + V+P +V G G++ + + + + V SN+
Sbjct: 92 -------KMD-AITVASVLPVCAQV-------GDILSGKLIHLYVIKHGLEFELFV-SNA 135
Query: 167 MILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQK-EGVRV 225
+I + G + A+ VF + KD +W+ +I Y + G E I+++ LM++ E +
Sbjct: 136 LINMYAKFGSLGHAQKVFGLLI-KDVVSWNTLITGYAQNGLASEAIEVYLLMEEHEEIIP 194
Query: 226 NFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIF 285
N + +S+L + + +L G ++H Q+++ DV+V + LI MY KCG+L +F
Sbjct: 195 NQGTWVSILPAYSHVGALQQGMRIHGQVIKNCLYSDVFVGTCLIDMYGKCGKLDDAISLF 254
Query: 286 DNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVK 345
K+ V WN++IS Y +G GEK+L++F EM + V PD +T V +LSACS++G V
Sbjct: 255 YQVPRKNSVPWNAMISCYGVHGDGEKALELFREMKAERVKPDHITFVSLLSACSHSGLVS 314
Query: 346 EGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
+ + F M+ +Y ++P +HY CMVDL GRAG++E A I+ MP +PDA WG+LL A
Sbjct: 315 DAQWCFNMMEEEYGIKPSLKHYGCMVDLFGRAGELEMAFNFIKKMPIQPDASAWGALLNA 374
Query: 406 CRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPP 465
CR H ++L + A+++L +++ +N G Y+LLSNIYA+ G++ V ++R R R + K P
Sbjct: 375 CRIHGNIELGKHASERLFEVDSENVGYYVLLSNIYANVGKWEGVDDVRSLARDRGLRKNP 434
Query: 466 GCSWIEVEKKVHMF-TGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEE 524
G S I + KV +F TG +HP+ I R L + ++ GY PD FVL DV+E+E
Sbjct: 435 GWSSIILNNKVDVFYTGNQ--THPKCEEIYRELRDLTSKIKTIGYVPDFCFVLQDVEEDE 492
Query: 525 KVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDAN 584
K H L HSE+LA+AYG++ PIR+ KNLRVCGDCH+ K IS + REII+RD++
Sbjct: 493 KEHILMGHSERLAIAYGIISTSPKTPIRIFKNLRVCGDCHTVTKFISIITEREIIVRDSS 552
Query: 585 RFHHFKDGLCSCRDYW 600
RFHHFK G CSC DYW
Sbjct: 553 RFHHFKGGTCSCGDYW 568
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 120/255 (47%), Gaps = 18/255 (7%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIR-DSRIDD--AR 57
MP R+ SW AM+ GY + G EA + +M + V + + + +++ D +
Sbjct: 55 MPARDRGSWNAMISGYCQNGNAAEALDIADEMRLEGVKMDAITVASVLPVCAQVGDILSG 114
Query: 58 RLFDMMP-----EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+L + E ++ ++ Y + G + +++F + K+V+SW T+I+GY N
Sbjct: 115 KLIHLYVIKHGLEFELFVSNALINMYAKFGSLGHAQKVFG-LLIKDVVSWNTLITGYAQN 173
Query: 113 NRIDVARKLFEVMPEKNEV-----SWTAMLMGYTQCGRIQDAW----ELFKAMPMKSVVA 163
A +++ +M E E+ +W ++L Y+ G +Q ++ K V
Sbjct: 174 GLASEAIEVYLLMEEHEEIIPNQGTWVSILPAYSHVGALQQGMRIHGQVIKNCLYSDVFV 233
Query: 164 SNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGV 223
+I G+ G++ A +F Q+ K+ W+ MI Y G + ++LF M+ E V
Sbjct: 234 GTCLIDMYGKCGKLDDAISLFYQVPRKNSVPWNAMISCYGVHGDGEKALELFREMKAERV 293
Query: 224 RVNFPSLISVLSVCA 238
+ + + +S+LS C+
Sbjct: 294 KPDHITFVSLLSACS 308
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 113/230 (49%), Gaps = 20/230 (8%)
Query: 233 VLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKD 292
V+ C L LD G+++H +++ F+ DV+VA+ L+ MY + G + + +FD+ ++D
Sbjct: 3 VVKACGDL--LD-GKKIHCLVLKLGFEWDVFVAASLVHMYSRFGLVGDARKLFDDMPARD 59
Query: 293 IVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFE 352
WN++ISGY Q G ++L + EM GV D +T+ VL C+ G + G+ I
Sbjct: 60 RGSWNAMISGYCQNGNAAEALDIADEMRLEGVKMDAITVASVLPVCAQVGDILSGKLIHL 119
Query: 353 SMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKL 412
+ K+ +E + ++++ + G + A K+ + D + W +L+ + +
Sbjct: 120 YV-IKHGLEFELFVSNALINMYAKFGSLGHAQKVFGLLI--KDVVSWNTLITG---YAQN 173
Query: 413 DLAEVAAKKLLQLEPK-----NAGPYILLSNIYASQGRFHDVAELRKNMR 457
LA A + L +E N G ++ + Y+ V L++ MR
Sbjct: 174 GLASEAIEVYLLMEEHEEIIPNQGTWVSILPAYSH------VGALQQGMR 217
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/284 (20%), Positives = 120/284 (42%), Gaps = 54/284 (19%)
Query: 4 RNVVSWTAMVRGYVEEGMITEAGTLFWQMPE----------------------------- 34
++VVSW ++ GY + G+ +EA ++ M E
Sbjct: 158 KDVVSWNTLITGYAQNGLASEAIEVYLLMEEHEEIIPNQGTWVSILPAYSHVGALQQGMR 217
Query: 35 ------KNVVSWTVMLGGFIRD-----SRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGR 83
KN + V +G + D ++DDA LF +P K+ V M+ Y G
Sbjct: 218 IHGQVIKNCLYSDVFVGTCLIDMYGKCGKLDDAISLFYQVPRKNSVPWNAMISCYGVHGD 277
Query: 84 VDEGREIFDEMPKKNV----ISWTTMISGYVNNNRIDVARKLFEVMPEKNEVS-----WT 134
++ E+F EM + V I++ +++S ++ + A+ F +M E+ + +
Sbjct: 278 GEKALELFREMKAERVKPDHITFVSLLSACSHSGLVSDAQWCFNMMEEEYGIKPSLKHYG 337
Query: 135 AMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQ-NGEVQKARVVFDQMREKDDA 193
M+ + + G ++ A+ K MP++ ++ +L + +G ++ + +++ E D
Sbjct: 338 CMVDLFGRAGELEMAFNFIKKMPIQPDASAWGALLNACRIHGNIELGKHASERLFEVDSE 397
Query: 194 T---WSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVL 234
+ + +Y G V D+ +L + G+R N P S++
Sbjct: 398 NVGYYVLLSNIYANVGKWEGVDDVRSLARDRGLRKN-PGWSSII 440
>gi|224089225|ref|XP_002308660.1| predicted protein [Populus trichocarpa]
gi|222854636|gb|EEE92183.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 184/429 (42%), Positives = 282/429 (65%), Gaps = 1/429 (0%)
Query: 172 GQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLI 231
G G ++ AR VFD+M + D +WS MI Y R G + I+LF MQ +GV + +++
Sbjct: 60 GGEGGIEFARKVFDEMYKSDSVSWSAMIGGYVRVGRSSDAINLFREMQIKGVCPDEITMV 119
Query: 232 SVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASK 291
SVLS C L +L+ G+ V + + + + +V +++ LI M+ KCG++ K +F + +
Sbjct: 120 SVLSACTGLGALELGKWVESYVEKERVQKNVELSNALIDMFAKCGDVDKATNLFRSMRER 179
Query: 292 DIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIF 351
+IV W S+I G A +G G +++ VF EM SGV PDDV +G+LSACS++G V +G+ F
Sbjct: 180 NIVSWTSVIGGLAMHGRGVEAVAVFEEMVRSGVTPDDVVFIGLLSACSHSGLVDKGKRYF 239
Query: 352 ESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMK 411
+SM+ + + PK EHY CMVD+L RAG V++A+K ++ MP +P+ ++W +L+ ACR H +
Sbjct: 240 DSMRKDFSIVPKIEHYGCMVDMLCRAGLVKEALKFVQEMPIDPNPVVWRTLINACRAHGE 299
Query: 412 LDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIE 471
L L E ++L++ EP + Y+LLSNIYA + +R+ M + + K PG + IE
Sbjct: 300 LKLGEKITRQLIRNEPMHESNYVLLSNIYAKMSDWEKKTRIREAMDMKGMKKIPGSTMIE 359
Query: 472 VEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRY 531
++ +++ F D SH + I M++++G ++ AGY P ++ VL D+D+E+K +L
Sbjct: 360 LDNEIYEFVAGD-KSHAQSKEIYEMVDEMGKEMKRAGYMPTTTEVLLDIDDEDKEDTLNR 418
Query: 532 HSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKD 591
HSEKLA+A+ L+ P G IR++KNLRVC DCHSA K ISK+ REI++RD NRFHHFK+
Sbjct: 419 HSEKLAIAFALLNTPPGTLIRIVKNLRVCDDCHSASKFISKIYNREIVVRDRNRFHHFKN 478
Query: 592 GLCSCRDYW 600
GLCSCRD+W
Sbjct: 479 GLCSCRDFW 487
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 96/181 (53%), Gaps = 6/181 (3%)
Query: 233 VLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKC----GELVKGKLIFDNF 288
VL CA + +L+ G+ VH +++ F +V V + L+ MY C G + + +FD
Sbjct: 16 VLKACAGIGNLNLGKSVHGSVMKFGFGDEVNVQNTLVHMYCCCRGGEGGIEFARKVFDEM 75
Query: 289 ASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGR 348
D V W+++I GY + G ++ +F EM GV PD++T+V VLSAC+ G ++ G+
Sbjct: 76 YKSDSVSWSAMIGGYVRVGRSSDAINLFREMQIKGVCPDEITMVSVLSACTGLGALELGK 135
Query: 349 EIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRT 408
+ ES K V+ E ++D+ + G V+ A L +M E + + W S++G
Sbjct: 136 WV-ESYVEKERVQKNVELSNALIDMFAKCGDVDKATNLFRSMR-ERNIVSWTSVIGGLAM 193
Query: 409 H 409
H
Sbjct: 194 H 194
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 86/350 (24%), Positives = 152/350 (43%), Gaps = 49/350 (14%)
Query: 67 DVVAQTNMVLGYC----QDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLF 122
+V Q +V YC +G ++ R++FDEM K + +SW+ MI GYV R A LF
Sbjct: 44 EVNVQNTLVHMYCCCRGGEGGIEFARKVFDEMYKSDSVSWSAMIGGYVRVGRSSDAINLF 103
Query: 123 EVMPEK----NEVSWTAMLMGYTQCGRIQ-DAW---ELFKAMPMKSVVASNSMILGLGQN 174
M K +E++ ++L T G ++ W + K K+V SN++I +
Sbjct: 104 REMQIKGVCPDEITMVSVLSACTGLGALELGKWVESYVEKERVQKNVELSNALIDMFAKC 163
Query: 175 GEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVL 234
G+V KA +F MRE++ +W+ +I G +E + +F M + GV + I +L
Sbjct: 164 GDVDKATNLFRSMRERNIVSWTSVIGGLAMHGRGVEAVAVFEEMVRSGVTPDDVVFIGLL 223
Query: 235 SVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIV 294
S C+ +D G++ + R F + I
Sbjct: 224 SACSHSGLVDKGKRYFDSM-RKDFSI-----------------------------VPKIE 253
Query: 295 MWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESM 354
+ ++ + GL +++LK EM + P+ V +++AC G++K G +I +
Sbjct: 254 HYGCMVDMLCRAGLVKEALKFVQEM---PIDPNPVVWRTLINACRAHGELKLGEKITRQL 310
Query: 355 KSKYLVEPKTE-HYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
EP E +Y + ++ + E ++ EAM + I GS +
Sbjct: 311 IRN---EPMHESNYVLLSNIYAKMSDWEKKTRIREAMDMKGMKKIPGSTM 357
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 117/255 (45%), Gaps = 22/255 (8%)
Query: 19 EGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVA-QTNM--V 75
EG I A +F +M + + VSW+ M+GG++R R DA LF M K V + M V
Sbjct: 62 EGGIEFARKVFDEMYKSDSVSWSAMIGGYVRVGRSSDAINLFREMQIKGVCPDEITMVSV 121
Query: 76 LGYCQD-GRVDEGR----EIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNE 130
L C G ++ G+ + E +KNV +I + +D A LF M E+N
Sbjct: 122 LSACTGLGALELGKWVESYVEKERVQKNVELSNALIDMFAKCGDVDKATNLFRSMRERNI 181
Query: 131 VSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGL----GQNGEVQKARVVFDQ 186
VSWT+++ G GR +A +F+ M V + + +GL +G V K + FD
Sbjct: 182 VSWTSVIGGLAMHGRGVEAVAVFEEMVRSGVTPDDVVFIGLLSACSHSGLVDKGKRYFDS 241
Query: 187 MREKDDAT------WSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASL 240
MR KD + + M+ + R G E + M + V + +LI + C +
Sbjct: 242 MR-KDFSIVPKIEHYGCMVDMLCRAGLVKEALKFVQEMPIDPNPVVWRTLI---NACRAH 297
Query: 241 ASLDHGRQVHAQLVR 255
L G ++ QL+R
Sbjct: 298 GELKLGEKITRQLIR 312
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 65/145 (44%), Gaps = 10/145 (6%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDM 62
++NV A++ + + G + +A LF M E+N+VSWT ++GG R +A +F+
Sbjct: 147 QKNVELSNALIDMFAKCGDVDKATNLFRSMRERNIVSWTSVIGGLAMHGRGVEAVAVFEE 206
Query: 63 MPEKDVVAQTNMVLGY----CQDGRVDEGREIFDEMPKKNVI-----SWTTMISGYVNNN 113
M V + +G G VD+G+ FD M K I + M+
Sbjct: 207 MVRSGVTPDDVVFIGLLSACSHSGLVDKGKRYFDSMRKDFSIVPKIEHYGCMVDMLCRAG 266
Query: 114 RIDVARKLFEVMP-EKNEVSWTAML 137
+ A K + MP + N V W ++
Sbjct: 267 LVKEALKFVQEMPIDPNPVVWRTLI 291
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 85/189 (44%), Gaps = 21/189 (11%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFI----RDSRIDDA 56
M ERN+VSWT+++ G G EA +F +M V V+ G + +D
Sbjct: 176 MRERNIVSWTSVIGGLAMHGRGVEAVAVFEEMVRSGVTPDDVVFIGLLSACSHSGLVDKG 235
Query: 57 RRLFDMMPEK-DVVAQTN----MVLGYCQDGRVDEGREIFDEMP-KKNVISWTTMISGYV 110
+R FD M + +V + MV C+ G V E + EMP N + W T+I+
Sbjct: 236 KRYFDSMRKDFSIVPKIEHYGCMVDMLCRAGLVKEALKFVQEMPIDPNPVVWRTLINACR 295
Query: 111 NNNRIDVARKLF------EVMPEKNEVSWT---AMLMGYTQCGRIQDAWEL--FKAMPMK 159
+ + + K+ E M E N V + A + + + RI++A ++ K +P
Sbjct: 296 AHGELKLGEKITRQLIRNEPMHESNYVLLSNIYAKMSDWEKKTRIREAMDMKGMKKIPGS 355
Query: 160 SVVASNSMI 168
+++ ++ I
Sbjct: 356 TMIELDNEI 364
>gi|15232500|ref|NP_188131.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546753|sp|P0C898.1|PP232_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g15130
gi|332642102|gb|AEE75623.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 689
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 217/629 (34%), Positives = 354/629 (56%), Gaps = 35/629 (5%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDA---- 56
MPERNVVSW+A++ G+V G + + +LF +M + + ++ + +A
Sbjct: 67 MPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKG 126
Query: 57 --------RRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISG 108
+ F+MM E ++V Y + GR++E ++F + +++ISW MI+G
Sbjct: 127 LQIHGFCLKIGFEMMVE----VGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAG 182
Query: 109 YVNNNRIDVARKLFEVMPEKN------EVSWTAMLMGYTQCGRIQDAWELFKAMPMK--- 159
+V+ A F +M E N E + T++L + G I ++ +
Sbjct: 183 FVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFH 242
Query: 160 ---SVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFT 216
S + S++ + G + AR FDQ++EK +WS +I Y ++G +E + LF
Sbjct: 243 CPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFK 302
Query: 217 LMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCG 276
+Q+ +++ +L S++ V A A L G+Q+ A V+ ++ V + ++ MY+KCG
Sbjct: 303 RLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCG 362
Query: 277 ELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLS 336
+ + + F KD++ W +I+GY ++GLG+KS+++F+EM + PD+V + VLS
Sbjct: 363 LVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLS 422
Query: 337 ACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDA 396
ACS++G +KEG E+F + + ++P+ EHYAC+VDLLGRAG++++A LI+ MP +P+
Sbjct: 423 ACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNV 482
Query: 397 IIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNM 456
IW +LL CR H ++L + K LL+++ KN Y+++SN+Y G +++ R+
Sbjct: 483 GIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELG 542
Query: 457 RKRNVIKPPGCSWIEVEKKVHMF-TGRDCVSHPEHPMIMRMLEKIGGLLREA-GYCPDSS 514
+ + K G SW+E+E++VH F +G D SHP P+I L++ LRE GY
Sbjct: 543 NIKGLKKEAGMSWVEIEREVHFFRSGED--SHPLTPVIQETLKEAERRLREELGYVYGLK 600
Query: 515 FVLHDVDEEEKVHSLRYHSEKLAVAYGLVK---LPEGVPIRVMKNLRVCGDCHSAIKLIS 571
LHD+D+E K +LR HSEKLA+ L +G IRV KNLRVC DCH IK +S
Sbjct: 601 HELHDIDDESKEENLRAHSEKLAIGLALATGGLNQKGKTIRVFKNLRVCVDCHEFIKGLS 660
Query: 572 KVMGREIILRDANRFHHFKDGLCSCRDYW 600
K+ ++RDA RFH F+DG CSC DYW
Sbjct: 661 KITKIAYVVRDAVRFHSFEDGCCSCGDYW 689
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 89/320 (27%), Positives = 151/320 (47%), Gaps = 11/320 (3%)
Query: 152 LFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEV 211
L K+ +++ SN +I + E A VFD M E++ +WS ++ + G
Sbjct: 32 LLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGS 91
Query: 212 IDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITM 271
+ LF+ M ++G+ N + + L C L +L+ G Q+H ++ F++ V V + L+ M
Sbjct: 92 LSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDM 151
Query: 272 YIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGV--MPDDV 329
Y KCG + + + +F + ++ WN++I+G+ G G K+L F M + + PD+
Sbjct: 152 YSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEF 211
Query: 330 TLVGVLSACSYTGKVKEGREIFESM-KSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIE 388
TL +L ACS TG + G++I + +S + +VDL + G + A K +
Sbjct: 212 TLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFD 271
Query: 389 AMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHD 448
+ E I W SL+ + A K+L +L + + L S I G F D
Sbjct: 272 QIK-EKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQ-IDSFALSSII----GVFAD 325
Query: 449 VAELR--KNMRKRNVIKPPG 466
A LR K M+ V P G
Sbjct: 326 FALLRQGKQMQALAVKLPSG 345
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 90/177 (50%), Gaps = 2/177 (1%)
Query: 229 SLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNF 288
+L+S+L VC D G QVH L++ +++ ++ LI MY KC E + +FD+
Sbjct: 8 NLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSM 67
Query: 289 ASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGR 348
+++V W++++SG+ G + SL +F EM G+ P++ T L AC +++G
Sbjct: 68 PERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGL 127
Query: 349 EIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
+I K E E +VD+ + G++ +A K+ + + I W +++
Sbjct: 128 QI-HGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRI-VDRSLISWNAMIAG 182
>gi|302768267|ref|XP_002967553.1| hypothetical protein SELMODRAFT_88824 [Selaginella moellendorffii]
gi|300164291|gb|EFJ30900.1| hypothetical protein SELMODRAFT_88824 [Selaginella moellendorffii]
Length = 670
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 226/601 (37%), Positives = 339/601 (56%), Gaps = 45/601 (7%)
Query: 12 MVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMM------PE 65
++ Y + G + A LF MP +NV +WTV + F + +A F M P+
Sbjct: 103 LIEMYGKCGRLPYARELFESMPSRNVHTWTVAMAAFSHNGCHSEALVFFRRMYQSGERPD 162
Query: 66 KDVVAQTNMVLGYCQDGRVDEGREIFDE------MPKKNVISWTTMISGYVNNNRIDVAR 119
+ + + +D+GREI +P NV+ T +IS Y R+D AR
Sbjct: 163 RVTFSVILAAIAQMGAAAIDQGREIHRYARISGLLP--NVVVGTAVISMYGKCGRLDDAR 220
Query: 120 KLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQK 179
FE + KN V+W AM+ Y GR ++A ELF+ M V N+MI Q+G ++
Sbjct: 221 AAFEELQWKNSVTWNAMMTNYKLDGRDREALELFREMHDADSVCWNAMIAAYAQHGRGKQ 280
Query: 180 ARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCAS 239
A ++ M + D L K+G + ++V+ VCA
Sbjct: 281 ALDLYRSMHDTTD------------------------LAPKQG------TFVTVIDVCAE 310
Query: 240 LASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSI 299
L++L GR +HA++ FD ++ V++ L+ MY KCG L + +F + KD + WN+I
Sbjct: 311 LSALKQGRAIHARVRATNFDANLLVSNALVHMYGKCGCLDEALDVFHSMKLKDEISWNTI 370
Query: 300 ISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYL 359
IS YA +G +++L ++ EM GV P +VT VG+LSACS+ G V +G + F M+ +
Sbjct: 371 ISSYAYHGHSDQALLLYQEMDLQGVKPTEVTFVGLLSACSHGGLVADGLDYFYRMQDDHR 430
Query: 360 VEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAA 419
++P H+ C++DLLGR G++ +A ++++MP + +A+ W SLLGAC+TH L AA
Sbjct: 431 IKPSVPHFGCIIDLLGRGGRLAEAELVLKSMPIQANAVQWMSLLGACKTHGDLKRGVRAA 490
Query: 420 KKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMF 479
+++ P +G Y+LLSNIYA+ GR+ DV ++RK M R V K PG SWIE+ VH F
Sbjct: 491 DQVVDRVPWTSGGYVLLSNIYAAAGRWKDVEKIRKIMAARGVKKSPGKSWIEIGDVVHEF 550
Query: 480 TGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVA 539
D SHP+ I L K+ ++ GY PD+S V HD++EEEK L HSEKLA+
Sbjct: 551 VSGDS-SHPQGEEIYVELGKMVEEMKGLGYVPDTSSVFHDLEEEEKEDLLVCHSEKLAIV 609
Query: 540 YGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDY 599
YG + +P +R++KNLRVC DCH+A K +S++ GR+I++RDA RFH F++G CSCRDY
Sbjct: 610 YGNMVVPGKSMLRIVKNLRVCLDCHTATKFMSRITGRKIVVRDAARFHLFENGSCSCRDY 669
Query: 600 W 600
W
Sbjct: 670 W 670
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/367 (23%), Positives = 160/367 (43%), Gaps = 68/367 (18%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM------PEKNVVSWTVMLGGFIRDSRID 54
MP RNV +WT + + G +EA F +M P++ S + + + ID
Sbjct: 123 MPSRNVHTWTVAMAAFSHNGCHSEALVFFRRMYQSGERPDRVTFSVILAAIAQMGAAAID 182
Query: 55 DAR------RLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISG 108
R R+ ++P +VV T ++ Y + GR+D+ R F+E+ KN ++W M++
Sbjct: 183 QGREIHRYARISGLLP--NVVVGTAVISMYGKCGRLDDARAAFEELQWKNSVTWNAMMTN 240
Query: 109 YVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAM-------PMK-- 159
Y + R A +LF M + + V W AM+ Y Q GR + A +L+++M P +
Sbjct: 241 YKLDGRDREALELFREMHDADSVCWNAMIAAYAQHGRGKQALDLYRSMHDTTDLAPKQGT 300
Query: 160 -------------------------------SVVASNSMILGLGQNGEVQKARVVFDQMR 188
+++ SN+++ G+ G + +A VF M+
Sbjct: 301 FVTVIDVCAELSALKQGRAIHARVRATNFDANLLVSNALVHMYGKCGCLDEALDVFHSMK 360
Query: 189 EKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQ 248
KD+ +W+ +I Y G+ + + L+ M +GV+ + + +LS C+ HG
Sbjct: 361 LKDEISWNTIISSYAYHGHSDQALLLYQEMDLQGVKPTEVTFVGLLSACS------HGGL 414
Query: 249 VHAQL---VRCQFDVDVYVA----SVLITMYIKCGELVKGKLIFDNFA-SKDIVMWNSII 300
V L R Q D + + +I + + G L + +L+ + + V W S++
Sbjct: 415 VADGLDYFYRMQDDHRIKPSVPHFGCIIDLLGRGGRLAEAELVLKSMPIQANAVQWMSLL 474
Query: 301 SGYAQYG 307
+G
Sbjct: 475 GACKTHG 481
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/261 (20%), Positives = 125/261 (47%), Gaps = 11/261 (4%)
Query: 217 LMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVD--VYVASVLITMYIK 274
L++ + ++ +++ C + ++ R++H+ ++ ++A++LI MY K
Sbjct: 50 LLESRELELDPVGYAALIRRCGAANAISAARRLHSHILSLPHSNSQPPFLANLLIEMYGK 109
Query: 275 CGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGV 334
CG L + +F++ S+++ W ++ ++ G ++L F M+ SG PD VT +
Sbjct: 110 CGRLPYARELFESMPSRNVHTWTVAMAAFSHNGCHSEALVFFRRMYQSGERPDRVTFSVI 169
Query: 335 L--SACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPF 392
L A + +GREI + L+ P ++ + G+ G+++DA E + +
Sbjct: 170 LAAIAQMGAAAIDQGREIHRYARISGLL-PNVVVGTAVISMYGKCGRLDDARAAFEELQW 228
Query: 393 EPDAIIWGSLLGACRTHMKLDLAEVAAKKLL-QLEPKNAGPYILLSNIYASQGRFHDVAE 451
+ +++ W +++ T+ KLD + A +L ++ ++ + + YA GR +
Sbjct: 229 K-NSVTWNAMM----TNYKLDGRDREALELFREMHDADSVCWNAMIAAYAQHGRGKQALD 283
Query: 452 LRKNMRKRNVIKPPGCSWIEV 472
L ++M + P +++ V
Sbjct: 284 LYRSMHDTTDLAPKQGTFVTV 304
>gi|414879360|tpg|DAA56491.1| TPA: hypothetical protein ZEAMMB73_164599 [Zea mays]
Length = 520
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 192/418 (45%), Positives = 261/418 (62%), Gaps = 1/418 (0%)
Query: 183 VFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLAS 242
VFD+M +D TW+ ++ R G + + M GV+ + ++ + LS CA+ +
Sbjct: 104 VFDEMPRRDVVTWTSLLTGLARAGAHGAAVRAYHGMVASGVQPDEFAVPAALSSCAASTA 163
Query: 243 LDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISG 302
LD GR VHA VR V + L++MY K G L + +FD ++ + W ++I G
Sbjct: 164 LDLGRSVHAAAVRLGLRPFRSVENSLVSMYAKTGALRDARAVFDAMPARCTITWTALIVG 223
Query: 303 YAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEP 362
YAQ G G +SL+V+ +M SG PD VT +G+L ACS+ G V GR F SM Y + P
Sbjct: 224 YAQNGRGRQSLEVYADMVRSGCRPDYVTFIGLLFACSHAGLVDAGRAHFRSMVPVYGIAP 283
Query: 363 KTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKL 422
+HYACMVDLLGRAG++++AM L+ E DA +W SLLGACR H +LAE AA+ +
Sbjct: 284 GPDHYACMVDLLGRAGRLDEAMDLLNRSSTELDATVWKSLLGACRVHQNAELAERAAEMV 343
Query: 423 LQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGR 482
+L+P +A PY++LSN+Y+ R+ DVA +R M+ R V K PGCSW+ V H+F
Sbjct: 344 WRLDPADAVPYVMLSNLYSRARRWGDVARIRALMKARGVTKEPGCSWVGVNGITHLFHVE 403
Query: 483 DCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGL 542
D HP I R +E++ +R GY PD+ + L D E + L YHSE+LAVA+GL
Sbjct: 404 D-RDHPRAAEIYRKVEEMTERIRVEGYVPDTDWALQDEVPEWRQRGLAYHSERLAVAFGL 462
Query: 543 VKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
+ +P PIRV KNLRVCGDCH+AIK+++KV GREIILRDAN FHH KDG CSC DYW
Sbjct: 463 LAVPAAAPIRVFKNLRVCGDCHTAIKMVAKVYGREIILRDANCFHHMKDGECSCGDYW 520
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 84/172 (48%), Gaps = 20/172 (11%)
Query: 90 IFDEMPKKNVISWTTMISGYVNNNRIDVARKLFE------VMPEKNEV--------SWTA 135
+FDEMP+++V++WT++++G A + + V P++ V + TA
Sbjct: 104 VFDEMPRRDVVTWTSLLTGLARAGAHGAAVRAYHGMVASGVQPDEFAVPAALSSCAASTA 163
Query: 136 MLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATW 195
+ +G + + A P +SV NS++ + G ++ AR VFD M + TW
Sbjct: 164 LDLGRS----VHAAAVRLGLRPFRSV--ENSLVSMYAKTGALRDARAVFDAMPARCTITW 217
Query: 196 SGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGR 247
+ +I Y + G + ++++ M + G R ++ + I +L C+ +D GR
Sbjct: 218 TALIVGYAQNGRGRQSLEVYADMVRSGCRPDYVTFIGLLFACSHAGLVDAGR 269
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 95/222 (42%), Gaps = 28/222 (12%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV----VSWTVMLGGFIRDSRIDDA 56
MP R+VV+WT+++ G G A + M V + L + +D
Sbjct: 108 MPRRDVVTWTSLLTGLARAGAHGAAVRAYHGMVASGVQPDEFAVPAALSSCAASTALDLG 167
Query: 57 RRL------FDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYV 110
R + + P + V + ++V Y + G + + R +FD MP + I+WT +I GY
Sbjct: 168 RSVHAAAVRLGLRPFRSV--ENSLVSMYAKTGALRDARAVFDAMPARCTITWTALIVGYA 225
Query: 111 NNNRIDVARKLFEVMPE-------KNEVSWTAMLMGYTQCGRIQDAWELFKAM-PMKSVV 162
N R R+ EV + + V++ +L + G + F++M P+ +
Sbjct: 226 QNGR---GRQSLEVYADMVRSGCRPDYVTFIGLLFACSHAGLVDAGRAHFRSMVPVYGIA 282
Query: 163 ASNS----MILGLGQNGEVQKARVVFDQMREKDDAT-WSGMI 199
M+ LG+ G + +A + ++ + DAT W ++
Sbjct: 283 PGPDHYACMVDLLGRAGRLDEAMDLLNRSSTELDATVWKSLL 324
>gi|307136183|gb|ADN34022.1| hypothetical protein [Cucumis melo subsp. melo]
Length = 773
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 196/525 (37%), Positives = 299/525 (56%), Gaps = 40/525 (7%)
Query: 115 IDVARKLFEVMPEKNEVSWTAMLMGYTQCGRI----------------QDAWELFKAMPM 158
+D RK+FE+MPEK+ VSW ++ G + G D++ L +P+
Sbjct: 250 VDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYGETLTMVREMGGANLKPDSFTLSSVLPL 309
Query: 159 -----------------------KSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATW 195
V ++S+I + V + VF + E+D +W
Sbjct: 310 IAENVDISKGKEIHGCSIRQGLDAEVYVASSLIDMYAKCTRVVDSYRVFTLLTERDGISW 369
Query: 196 SGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVR 255
+ +I + G E + F M ++ S S++ CA L +L G+Q+H + R
Sbjct: 370 NSIIAGCVQNGLFDEGLKFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITR 429
Query: 256 CQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKV 315
FD ++++AS L+ MY KCG + + IFD +D+V W ++I G A +G ++++
Sbjct: 430 NGFDENIFIASSLVDMYAKCGNIRTARQIFDRMRLRDMVSWTAMIMGCALHGHALDAIEL 489
Query: 316 FHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLG 375
F +M + G+ P+ V + VL+ACS+ G V E + F SM + + P EHYA + DLLG
Sbjct: 490 FEQMKTEGIEPNYVAFMAVLTACSHAGLVDEAWKYFNSMTLDFGIAPGVEHYAAVSDLLG 549
Query: 376 RAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYIL 435
RAG++E+A I MP P +W +LL ACR H +D+AE A ++L+++PKN G YIL
Sbjct: 550 RAGRLEEAYDFICGMPIGPTGSVWATLLSACRVHKNVDMAEKVANRILEVDPKNTGAYIL 609
Query: 436 LSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMR 495
L+NIY++ R+ + A+ R ++R+ + K P CSWIEV KV+ F D SHP + I
Sbjct: 610 LANIYSAARRWKEAAKWRASLRRTGIRKTPACSWIEVRNKVYAFMAGD-ESHPCYEKIRE 668
Query: 496 MLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMK 555
+E + L+ + GY PD+S V HDV+EE+K + + HSE+LA+ +G++ P G IRV K
Sbjct: 669 AMEVLMELMEKEGYVPDTSEVHHDVEEEQKKYLVCSHSERLAIVFGIINTPAGTTIRVTK 728
Query: 556 NLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
NLRVC DCH+A K ISK++GREI++RD +RFHHFK+G CSC DYW
Sbjct: 729 NLRVCTDCHTATKFISKIVGREIVVRDNSRFHHFKNGTCSCGDYW 773
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 118/242 (48%), Gaps = 2/242 (0%)
Query: 168 ILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNF 227
I + + V R +F+ M EKD +W+ +I R G E + + M ++ +
Sbjct: 241 IKDISHSMSVDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYGETLTMVREMGGANLKPDS 300
Query: 228 PSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDN 287
+L SVL + A + G+++H +R D +VYVAS LI MY KC +V +F
Sbjct: 301 FTLSSVLPLIAENVDISKGKEIHGCSIRQGLDAEVYVASSLIDMYAKCTRVVDSYRVFTL 360
Query: 288 FASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEG 347
+D + WNSII+G Q GL ++ LK F +M + + P + ++ AC++ + G
Sbjct: 361 LTERDGISWNSIIAGCVQNGLFDEGLKFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLG 420
Query: 348 REIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACR 407
+++ + ++ + + +VD+ + G + A ++ + M D + W +++ C
Sbjct: 421 KQLHGYI-TRNGFDENIFIASSLVDMYAKCGNIRTARQIFDRMRLR-DMVSWTAMIMGCA 478
Query: 408 TH 409
H
Sbjct: 479 LH 480
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/270 (20%), Positives = 111/270 (41%), Gaps = 78/270 (28%)
Query: 53 IDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKN-------------- 98
+D R++F+MMPEKD+V+ ++ G ++G E + EM N
Sbjct: 250 VDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYGETLTMVREMGGANLKPDSFTLSSVLPL 309
Query: 99 -------------------------VISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSW 133
V +++I Y R+ + ++F ++ E++ +SW
Sbjct: 310 IAENVDISKGKEIHGCSIRQGLDAEVYVASSLIDMYAKCTRVVDSYRVFTLLTERDGISW 369
Query: 134 TAMLMGYTQCGRIQDAWELFKAMPM----------------------------------- 158
+++ G Q G + + F+ M M
Sbjct: 370 NSIIAGCVQNGLFDEGLKFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITR 429
Query: 159 ----KSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDL 214
+++ ++S++ + G ++ AR +FD+MR +D +W+ MI G+ L+ I+L
Sbjct: 430 NGFDENIFIASSLVDMYAKCGNIRTARQIFDRMRLRDMVSWTAMIMGCALHGHALDAIEL 489
Query: 215 FTLMQKEGVRVNFPSLISVLSVCASLASLD 244
F M+ EG+ N+ + ++VL+ C+ +D
Sbjct: 490 FEQMKTEGIEPNYVAFMAVLTACSHAGLVD 519
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 87/175 (49%), Gaps = 12/175 (6%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV----VSWTVMLGGFIRDSRIDDA 56
+ ER+ +SW +++ G V+ G+ E F QM + S++ ++ + +
Sbjct: 361 LTERDGISWNSIIAGCVQNGLFDEGLKFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLG 420
Query: 57 RRLFDMMP----EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
++L + ++++ +++V Y + G + R+IFD M ++++SWT MI G +
Sbjct: 421 KQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTARQIFDRMRLRDMVSWTAMIMGCALH 480
Query: 113 NRIDVARKLFEVMP----EKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVA 163
A +LFE M E N V++ A+L + G + +AW+ F +M + +A
Sbjct: 481 GHALDAIELFEQMKTEGIEPNYVAFMAVLTACSHAGLVDEAWKYFNSMTLDFGIA 535
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 41/92 (44%)
Query: 183 VFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLAS 242
+F+ + W +I+ Y G + + F M G+ + SVL CA L
Sbjct: 64 LFNTLHFPPALAWKSVIRCYTSHGLPHKSLGSFIGMLASGLYPDHNVFPSVLKACAMLMD 123
Query: 243 LDHGRQVHAQLVRCQFDVDVYVASVLITMYIK 274
L+ G +H ++R D D+Y + L+ MY K
Sbjct: 124 LNLGESLHGYIIRVGLDFDLYTGNALMNMYSK 155
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 53/108 (49%), Gaps = 1/108 (0%)
Query: 232 SVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASK 291
S+L S+ S +Q+HAQ+++ Q + S+L+++Y L +F+
Sbjct: 13 SLLRNPLSIKSRSQAQQLHAQVLKFQ-ASSLCNLSLLLSIYSHINLLHDSLRLFNTLHFP 71
Query: 292 DIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACS 339
+ W S+I Y +GL KSL F M +SG+ PD VL AC+
Sbjct: 72 PALAWKSVIRCYTSHGLPHKSLGSFIGMLASGLYPDHNVFPSVLKACA 119
>gi|358345892|ref|XP_003637008.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355502943|gb|AES84146.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 647
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 230/640 (35%), Positives = 358/640 (55%), Gaps = 62/640 (9%)
Query: 7 VSWTAMVRGYVEEGMITEAGTLFWQM-------PEK----NVVSWTVMLGGFIRDSRID- 54
VSW ++V Y + +A LF +M P+ N++ + LG F+ ++ +D
Sbjct: 24 VSWNSIVSVYSHCFVPNDAVFLFREMTVGYGILPDTVGVVNILPVSGFLGFFVGNALVDM 83
Query: 55 --------DARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKK----NVISW 102
DA ++F+ M KDVV MV GY Q+GR ++ +F +M ++ +V++W
Sbjct: 84 YAKCGKMEDASKVFERMRFKDVVTWNAMVTGYSQNGRFEDALSLFGKMREEKIELDVVTW 143
Query: 103 TTMISGYVNNN----RIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPM 158
+++ISGY +DV R++ N V+ ++L G + E +
Sbjct: 144 SSVISGYAQRGFGCEAMDVFRQMCGCRCRPNVVTLMSLLSACASVGALLHGKET-HCYSV 202
Query: 159 KSVVAS------------NSMILGLGQNGEVQKARVVFDQM--REKDDATWSGMIKVYER 204
K ++ N++I + ++ AR +FD++ +++D TW+ MI Y +
Sbjct: 203 KFILKGEHNDDTDDLAVINALIDMYAKCKSLEVARAMFDEICPKDRDVVTWTVMIGGYAQ 262
Query: 205 KGYELEVIDLFTLMQK--EGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVR-CQFDVD 261
G + LF+ M K + N ++ VL CA LA+L G+Q+HA ++R + D D
Sbjct: 263 HGDANHALQLFSEMFKIDNCIVPNDFTISCVLMACARLAALKFGKQIHAYVLRRSRIDSD 322
Query: 262 V-YVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMF 320
V +VA+ LI MY K G++ +++FD+ + ++ V W S+++GY +G
Sbjct: 323 VLFVANCLIDMYSKSGDVDTAQVVFDSMSKRNAVSWTSLLTGYGMHG------------- 369
Query: 321 SSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQV 380
+ ++ D +T + VL ACS++G V G ++F M ++V+P EHYACM DL GRAG++
Sbjct: 370 -AALVLDGITFLVVLYACSHSGMVDRGIDLFYRMSKDFVVDPGVEHYACMADLFGRAGRL 428
Query: 381 EDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIY 440
+A +LI M EP ++W +LL ACRTH +LAE AAKKLL+L+ N G Y LLSNIY
Sbjct: 429 CEATRLINDMSMEPTPVVWIALLSACRTHSNEELAEFAAKKLLELKADNDGTYTLLSNIY 488
Query: 441 ASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKI 500
A+ R+ DVA +R M++ + K PG SW++ K + F D +H + I L +
Sbjct: 489 ANARRWKDVARIRYLMKRTGIKKRPGWSWVKGRKGMETFYVGD-RTHLQSQKIYETLADL 547
Query: 501 GGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVC 560
++ GY P ++F LHDVD+EEK L HSEKLA+AY ++ LP G PIR+ KNLR+C
Sbjct: 548 IKRIKAIGYVPQTNFSLHDVDDEEKGDQLLEHSEKLALAYAILTLPPGAPIRITKNLRIC 607
Query: 561 GDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
GD HSAI IS ++ EIILRD++RFH FK+G CSC+ YW
Sbjct: 608 GDFHSAITYISMIVEHEIILRDSSRFHQFKNGSCSCKGYW 647
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 85/371 (22%), Positives = 155/371 (41%), Gaps = 86/371 (23%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEK----NVVSWTVMLGGFIRDSRIDDA 56
M ++VV+W AMV GY + G +A +LF +M E+ +VV+W+ ++ G+ + +A
Sbjct: 100 MRFKDVVTWNAMVTGYSQNGRFEDALSLFGKMREEKIELDVVTWSSVISGYAQRGFGCEA 159
Query: 57 RRLFDMM----PEKDVVAQTNMVLGYCQDGRVDEGREIF-------------DEMPKKNV 99
+F M +VV +++ G + G+E D+ V
Sbjct: 160 MDVFRQMCGCRCRPNVVTLMSLLSACASVGALLHGKETHCYSVKFILKGEHNDDTDDLAV 219
Query: 100 ISWTTMISGYVNNNRIDVARKLF-EVMP-EKNEVSWTAMLMGYTQCGRIQDAWELFKAM- 156
I+ +I Y ++VAR +F E+ P +++ V+WT M+ GY Q G A +LF M
Sbjct: 220 IN--ALIDMYAKCKSLEVARAMFDEICPKDRDVVTWTVMIGGYAQHGDANHALQLFSEMF 277
Query: 157 -------PMKSVVA-----------------------------------SNSMILGLGQN 174
P ++ +N +I ++
Sbjct: 278 KIDNCIVPNDFTISCVLMACARLAALKFGKQIHAYVLRRSRIDSDVLFVANCLIDMYSKS 337
Query: 175 GEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVL 234
G+V A+VVFD M +++ +W+ ++ Y G L V+D T + VL
Sbjct: 338 GDVDTAQVVFDSMSKRNAVSWTSLLTGYGMHGAAL-VLDGITFL-------------VVL 383
Query: 235 SVCASLASLDHGRQVHAQLVRCQFDVDVYVA--SVLITMYIKCGELVKG-KLIFDNFASK 291
C+ +D G + ++ + F VD V + + ++ + G L + +LI D
Sbjct: 384 YACSHSGMVDRGIDLFYRMSK-DFVVDPGVEHYACMADLFGRAGRLCEATRLINDMSMEP 442
Query: 292 DIVMWNSIISG 302
V+W +++S
Sbjct: 443 TPVVWIALLSA 453
>gi|302805077|ref|XP_002984290.1| hypothetical protein SELMODRAFT_119978 [Selaginella moellendorffii]
gi|300148139|gb|EFJ14800.1| hypothetical protein SELMODRAFT_119978 [Selaginella moellendorffii]
Length = 448
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 186/440 (42%), Positives = 280/440 (63%), Gaps = 2/440 (0%)
Query: 161 VVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQK 220
V S++ G+ + AR+VF+++ KD TW+ ++ Y + GY E +++F MQ+
Sbjct: 11 TVVGTSLVNMYGRCHSLGNARLVFERIPCKDAITWNAIVTAYAQDGYGKEALEIFQRMQQ 70
Query: 221 EGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVK 280
EGV+ + ISVL CAS ++L GR +H LV D ++ VA+ L+ MY KCG+LV+
Sbjct: 71 EGVKTGSATFISVLEACASTSALALGRVIHQNLVANGLDRELIVATALVNMYAKCGKLVE 130
Query: 281 GKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSY 340
+ +FD D+V W +I++G AQ+G E+S + M G+ P++VT + ++ ACS+
Sbjct: 131 AREVFDQMEGMDVVAWTAIVAGSAQHGHIEESKDLMRRMELEGIKPNNVTFLSLVFACSH 190
Query: 341 TGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWG 400
+G + E R+ F +M P EH+ C++DLLGR G++E+A ++I+ MPFEP W
Sbjct: 191 SGYLDEARDCFIAMADHGFF-PLPEHFRCVIDLLGRGGRLEEAQEVIDTMPFEPGLTAWL 249
Query: 401 SLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRN 460
++L ACR + AE+AA+K ++EP Y+L+SN+YA+ R+ DV ++R+ M +R
Sbjct: 250 TMLSACRLQKDVLRAEIAAEKCYEIEPTRPSAYLLMSNLYAALERWDDVKKVRRLMERRG 309
Query: 461 VIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDV 520
V K PG S IEV+ ++H F G SHP+ +I L K+ ++EAGY PD+S VLH+V
Sbjct: 310 VKKEPGLSCIEVKNRLHEF-GAANKSHPQKDLIYEELRKLTLEIKEAGYVPDTSLVLHNV 368
Query: 521 DEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIIL 580
DEE K +L +HSE+LAV YGL+ P G + V+ NLR+C DCH+A K IS + REI++
Sbjct: 369 DEETKQATLFHHSERLAVVYGLINTPPGTSLCVVNNLRMCSDCHTAFKYISTISNREIVV 428
Query: 581 RDANRFHHFKDGLCSCRDYW 600
RDANRFH F G CSC+DYW
Sbjct: 429 RDANRFHTFATGGCSCKDYW 448
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 94/184 (51%), Gaps = 3/184 (1%)
Query: 258 FDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFH 317
+ + V + L+ MY +C L +L+F+ KD + WN+I++ YAQ G G+++L++F
Sbjct: 7 LEAETVVGTSLVNMYGRCHSLGNARLVFERIPCKDAITWNAIVTAYAQDGYGKEALEIFQ 66
Query: 318 EMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRA 377
M GV T + VL AC+ T + GR I +++ + L A +V++ +
Sbjct: 67 RMQQEGVKTGSATFISVLEACASTSALALGRVIHQNLVANGLDRELIVATA-LVNMYAKC 125
Query: 378 GQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLS 437
G++ +A ++ + M D + W +++ H ++ ++ ++ ++LE LS
Sbjct: 126 GKLVEAREVFDQME-GMDVVAWTAIVAGSAQHGHIEESKDLMRR-MELEGIKPNNVTFLS 183
Query: 438 NIYA 441
++A
Sbjct: 184 LVFA 187
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 99/207 (47%), Gaps = 15/207 (7%)
Query: 34 EKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDE 93
E V T ++ + R + +AR +F+ +P KD + +V Y QDG E EIF
Sbjct: 8 EAETVVGTSLVNMYGRCHSLGNARLVFERIPCKDAITWNAIVTAYAQDGYGKEALEIFQR 67
Query: 94 MPKKNV----ISWTTMISGYVNNNRIDVARKLFEVMP----EKNEVSWTAMLMGYTQCGR 145
M ++ V ++ +++ + + + + R + + + ++ + TA++ Y +CG+
Sbjct: 68 MQQEGVKTGSATFISVLEACASTSALALGRVIHQNLVANGLDRELIVATALVNMYAKCGK 127
Query: 146 IQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMR----EKDDATWSGMIKV 201
+ +A E+F M VVA +++ G Q+G +++++ + +M + ++ T+ ++
Sbjct: 128 LVEAREVFDQMEGMDVVAWTAIVAGSAQHGHIEESKDLMRRMELEGIKPNNVTFLSLVFA 187
Query: 202 YERKGYELEVIDLFTLMQKEGVRVNFP 228
GY E D F M G FP
Sbjct: 188 CSHSGYLDEARDCFIAMADHGF---FP 211
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/191 (21%), Positives = 90/191 (47%), Gaps = 8/191 (4%)
Query: 65 EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEV 124
E + V T++V Y + + R +F+ +P K+ I+W +++ Y + A ++F+
Sbjct: 8 EAETVVGTSLVNMYGRCHSLGNARLVFERIPCKDAITWNAIVTAYAQDGYGKEALEIFQR 67
Query: 125 MPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPM--------KSVVASNSMILGLGQNGE 176
M ++ + +A + + A L + + + ++ + +++ + G+
Sbjct: 68 MQQEGVKTGSATFISVLEACASTSALALGRVIHQNLVANGLDRELIVATALVNMYAKCGK 127
Query: 177 VQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSV 236
+ +AR VFDQM D W+ ++ + G+ E DL M+ EG++ N + +S++
Sbjct: 128 LVEAREVFDQMEGMDVVAWTAIVAGSAQHGHIEESKDLMRRMELEGIKPNNVTFLSLVFA 187
Query: 237 CASLASLDHGR 247
C+ LD R
Sbjct: 188 CSHSGYLDEAR 198
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 57/277 (20%), Positives = 115/277 (41%), Gaps = 55/277 (19%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV----------------------- 37
+P ++ ++W A+V Y ++G EA +F +M ++ V
Sbjct: 37 IPCKDAITWNAIVTAYAQDGYGKEALEIFQRMQQEGVKTGSATFISVLEACASTSALALG 96
Query: 38 ----------------VSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQD 81
+ T ++ + + ++ +AR +FD M DVVA T +V G Q
Sbjct: 97 RVIHQNLVANGLDRELIVATALVNMYAKCGKLVEAREVFDQMEGMDVVAWTAIVAGSAQH 156
Query: 82 GRVDEGREIFDEMP----KKNVISWTTMISGYVNNNRIDVARKLFEVM------PEKNEV 131
G ++E +++ M K N +++ +++ ++ +D AR F M P
Sbjct: 157 GHIEESKDLMRRMELEGIKPNNVTFLSLVFACSHSGYLDEARDCFIAMADHGFFPLPEHF 216
Query: 132 SWTAMLMGYTQCGRIQDAWELFKAMPMK-SVVASNSMILGLGQNGEVQKARVVFDQMREK 190
L+G + GR+++A E+ MP + + A +M+ +V +A + ++ E
Sbjct: 217 RCVIDLLG--RGGRLEEAQEVIDTMPFEPGLTAWLTMLSACRLQKDVLRAEIAAEKCYEI 274
Query: 191 DDATWSG---MIKVYERKGYELEVIDLFTLMQKEGVR 224
+ S M +Y +V + LM++ GV+
Sbjct: 275 EPTRPSAYLLMSNLYAALERWDDVKKVRRLMERRGVK 311
>gi|296089786|emb|CBI39605.3| unnamed protein product [Vitis vinifera]
Length = 624
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 212/521 (40%), Positives = 317/521 (60%), Gaps = 20/521 (3%)
Query: 90 IFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMP----EKNEVSWTAMLMGYTQCGR 145
+FD + K NV W MI + NN A L+ M N+ ++ A+L + G
Sbjct: 114 VFDFVRKPNVFLWNCMIKVCIENNEPFKAILLYYEMMVAHFRPNKYTYPAVLKACSDAGV 173
Query: 146 IQDAWELFKAMPMKSVVASNSMILG-----LGQNGEVQKARVVFDQMREKDDATWSGMIK 200
+ + ++ A +K + + IL G + +AR + D + DA +
Sbjct: 174 VAEGVQV-HAHLVKHGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDA-----VC 227
Query: 201 VYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDV 260
+ +RKG +E +++F MQKE +R L SVLS CA+L +LD GR +H R +
Sbjct: 228 MPDRKGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQL 287
Query: 261 DVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMF 320
D + + L+ MY KCG + +F+ ++K++ WN++I G A +G E ++ +F +M
Sbjct: 288 DGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKM- 346
Query: 321 SSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQV 380
+ P+++T VGVL+AC++ G V++G IF SM+ +Y VEP+ EHY C+VDLLGRAG +
Sbjct: 347 --DINPNEITFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLL 404
Query: 381 EDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIY 440
+A K++ ++P EP +WG+LLGACR H ++L E K LL+LEP+N+G Y LLSNIY
Sbjct: 405 TEAEKVVSSIPTEPTPAVWGALLGACRKHGNVELGERVGKILLELEPQNSGRYTLLSNIY 464
Query: 441 ASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEK-KVHMFTGRDCVSHPEHPMIMRMLEK 499
A GR+ +V E+RK M++R + PG S I++ + +VH F D SHP+ I +ML+K
Sbjct: 465 AKAGRWEEVGEVRKLMKERGIKTTPGTSIIDLGRGEVHKFIIGDG-SHPQVKDIYQMLDK 523
Query: 500 IGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRV 559
+ L+ GY PD S VL D+DEEEK ++ HSEKLA+ +GL+ G IR++KNLRV
Sbjct: 524 VKERLQMEGYEPDPSQVLFDIDEEEKETAVWQHSEKLAIGFGLINTSPGTTIRIVKNLRV 583
Query: 560 CGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
C DCHSA KLIS+V REII+RD R+HHF++G CSC+D+W
Sbjct: 584 CEDCHSATKLISQVYNREIIVRDRIRYHHFRNGACSCKDFW 624
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 66/147 (44%), Gaps = 7/147 (4%)
Query: 67 DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMP 126
D V T++V Y + GR+D E+F++M K V SW MI G + R + A LF M
Sbjct: 288 DGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKMD 347
Query: 127 -EKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILG-----LGQNGEVQKA 180
NE+++ +L G +Q +F +M + V G LG+ G + +A
Sbjct: 348 INPNEITFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEA 407
Query: 181 -RVVFDQMREKDDATWSGMIKVYERKG 206
+VV E A W ++ + G
Sbjct: 408 EKVVSSIPTEPTPAVWGALLGACRKHG 434
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 92/222 (41%), Gaps = 31/222 (13%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVV 69
T++V Y + G I A +F +M K V SW M+GG R +DA LF M
Sbjct: 293 TSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKMDINPNE 352
Query: 70 AQTNMVLGYC-QDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEK 128
VL C G V +G IF+ M RK + V P+
Sbjct: 353 ITFVGVLNACAHGGLVQKGLTIFNSM------------------------RKEYGVEPQI 388
Query: 129 NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILG-LGQNGEV---QKARVVF 184
L+G + G + +A ++ ++P + A +LG ++G V ++ +
Sbjct: 389 EHYGCIVDLLG--RAGLLTEAEKVVSSIPTEPTPAVWGALLGACRKHGNVELGERVGKIL 446
Query: 185 DQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVN 226
++ ++ ++ + +Y + G EV ++ LM++ G++
Sbjct: 447 LELEPQNSGRYTLLSNIYAKAGRWEEVGEVRKLMKERGIKTT 488
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 82/182 (45%), Gaps = 7/182 (3%)
Query: 221 EGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCG---- 276
E +++ +++ +L+ + SL H +Q HA ++R D Y+A L+ Y
Sbjct: 47 ETSKLSHKAILHLLNTQCT-TSLHHLKQAHALILRTGHLQDSYIAGSLVKSYANVSTNRY 105
Query: 277 -ELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVL 335
+FD ++ +WN +I + K++ +++EM + P+ T VL
Sbjct: 106 LSFESSLRVFDFVRKPNVFLWNCMIKVCIENNEPFKAILLYYEMMVAHFRPNKYTYPAVL 165
Query: 336 SACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPD 395
ACS G V EG ++ + K+ + + + + G++ +A ++++ E D
Sbjct: 166 KACSDAGVVAEGVQVHAHL-VKHGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVD 224
Query: 396 AI 397
A+
Sbjct: 225 AV 226
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 102/224 (45%), Gaps = 20/224 (8%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMP-EKNVVSWTVML-----GGFIRD--SR 52
M + V SW AM+ G G +A LF +M N +++ +L GG ++ +
Sbjct: 315 MSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKMDINPNEITFVGVLNACAHGGLVQKGLTI 374
Query: 53 IDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVIS-WTTMISGYVN 111
+ R+ + + P+ + +LG + G + E ++ +P + + W ++
Sbjct: 375 FNSMRKEYGVEPQIEHYGCIVDLLG--RAGLLTEAEKVVSSIPTEPTPAVWGALLGACRK 432
Query: 112 NNRIDVARKLFEVMPE---KNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSV-VASNSM 167
+ +++ ++ +++ E +N +T + Y + GR ++ E+ K M + + +
Sbjct: 433 HGNVELGERVGKILLELEPQNSGRYTLLSNIYAKAGRWEEVGEVRKLMKERGIKTTPGTS 492
Query: 168 ILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYER---KGYE 208
I+ LG+ GEV K ++ D + + + KV ER +GYE
Sbjct: 493 IIDLGR-GEVHKF-IIGDGSHPQVKDIYQMLDKVKERLQMEGYE 534
>gi|224104375|ref|XP_002313416.1| predicted protein [Populus trichocarpa]
gi|222849824|gb|EEE87371.1| predicted protein [Populus trichocarpa]
Length = 650
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 219/620 (35%), Positives = 344/620 (55%), Gaps = 25/620 (4%)
Query: 2 PERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFD 61
P + +++ ++G +T+A L P ++ +++ + + DA+R+
Sbjct: 35 PTASTADNNKLIQSLCKQGNLTQALELLSLEPNPAQHTYELLILSCTHQNSLLDAQRVHR 94
Query: 62 MMPE----KDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDV 117
+ E +D T ++ Y +D R++FD+ + + + + +
Sbjct: 95 HLLENGFDQDPFLATKLINMYSFFDSIDNARKVFDKTRNRTIYVYNALFRALSLAGHGEE 154
Query: 118 ARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKS---------------VV 162
++ M N + + YT + A E F ++ K V
Sbjct: 155 VLNMYRRM---NSIGIPSDRFTYTYVLKACVASECFVSLLNKGREIHAHILRHGYDGYVH 211
Query: 163 ASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLF--TLMQK 220
+++ + G V A VF+QM K+ +WS MI Y + G E ++LF +++
Sbjct: 212 IMTTLVDMYAKFGCVSNASCVFNQMPVKNVVSWSAMIACYAKNGKAFEALELFRELMLET 271
Query: 221 EGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVK 280
+ + N +++SVL CA+LA+L+ GR +H ++R D + V S L+TMY +CG+L
Sbjct: 272 QDLCPNSVTMVSVLQACAALAALEQGRLIHGYILRKGLDSILPVISALVTMYARCGKLEL 331
Query: 281 GKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSY 340
G+ +FD +D+V WNS+IS Y +G G+K++ +F EM +GV P ++ V VL ACS+
Sbjct: 332 GQRVFDQMDKRDVVSWNSLISSYGVHGFGKKAIGIFEEMTYNGVEPSPISFVSVLGACSH 391
Query: 341 TGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWG 400
G V EG+ +F SM + + P EHYACMVDLLGRA ++E+A K+IE M EP +WG
Sbjct: 392 AGLVDEGKMLFNSMHVAHGICPSVEHYACMVDLLGRANRLEEAAKIIENMRIEPGPKVWG 451
Query: 401 SLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRN 460
SLLG+CR H ++LAE A+ +L LEP NAG Y+LL++IYA G + V ++K + R
Sbjct: 452 SLLGSCRIHCNVELAERASIRLFDLEPTNAGNYVLLADIYAEAGMWDGVKRVKKLLEARG 511
Query: 461 VIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDV 520
+ K PG SWIEV++K++ F D V+ P + +L K+ L+E GY P + VL+D+
Sbjct: 512 LQKVPGRSWIEVKRKIYSFVSVDEVN-PRMEQLHALLVKLSMELKEEGYVPQTKVVLYDL 570
Query: 521 DEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIIL 580
EK + HSEKLAVA+GL+ +G IR+ K+LR+C DCHS K ISK +EI++
Sbjct: 571 KAAEKERIVLGHSEKLAVAFGLINSSKGEVIRITKSLRLCEDCHSFTKFISKFANKEILV 630
Query: 581 RDANRFHHFKDGLCSCRDYW 600
RD NRFHHF+DG+CSC DYW
Sbjct: 631 RDVNRFHHFRDGVCSCGDYW 650
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 106/219 (48%), Gaps = 20/219 (9%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEK------NVVSWTVMLGGFIRDSRID 54
MP +NVVSW+AM+ Y + G EA LF ++ + N V+ +L + ++
Sbjct: 236 MPVKNVVSWSAMIACYAKNGKAFEALELFRELMLETQDLCPNSVTMVSVLQACAALAALE 295
Query: 55 DARRLFDMMPEKDVVA----QTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYV 110
R + + K + + + +V Y + G+++ G+ +FD+M K++V+SW ++IS Y
Sbjct: 296 QGRLIHGYILRKGLDSILPVISALVTMYARCGKLELGQRVFDQMDKRDVVSWNSLISSYG 355
Query: 111 NNNRIDVARKLFEVMP----EKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMK-----SV 161
+ A +FE M E + +S+ ++L + G + + LF +M + SV
Sbjct: 356 VHGFGKKAIGIFEEMTYNGVEPSPISFVSVLGACSHAGLVDEGKMLFNSMHVAHGICPSV 415
Query: 162 VASNSMILGLGQNGEVQKARVVFDQMR-EKDDATWSGMI 199
M+ LG+ +++A + + MR E W ++
Sbjct: 416 EHYACMVDLLGRANRLEEAAKIIENMRIEPGPKVWGSLL 454
>gi|449500413|ref|XP_004161091.1| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial-like [Cucumis sativus]
Length = 610
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 200/551 (36%), Positives = 317/551 (57%), Gaps = 12/551 (2%)
Query: 58 RLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDV 117
R+F + +D +V Y + G ++ ++FD+MP K+++SW ++ISG+ + +
Sbjct: 64 RVFKSLLYRDGFIGDQLVTCYNKLGYAEDALKLFDDMPHKDLVSWNSLISGFSRCLHMSL 123
Query: 118 ARKL---FEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMK-----SVVASNSMIL 169
FE+ + NEV+ +M+ + C DA + +K V +NS+I
Sbjct: 124 TAFYTMKFEMSVKPNEVTILSMI---SACNGALDAGKYIHGFGIKVGGTLEVKVANSLIN 180
Query: 170 GLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPS 229
G++G++ A +F+ + + + +W+ +I G E ID F M++ G+ + +
Sbjct: 181 MYGKSGDLTSACRLFEAIPDPNTVSWNSIIAAQVTNGCAREGIDYFNKMRRLGIEQDEGT 240
Query: 230 LISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFA 289
++++L C L +H + F + +A+ L+ Y K G L +F
Sbjct: 241 ILALLQACLHLGVGKLAESIHGLMFCTGFGAKITIATALLDTYAKLGRLSASYGVFTEVG 300
Query: 290 SKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGRE 349
D V W ++++GYA +GLG +++K+F M + G+ PD VT +LSACS++G V EG+
Sbjct: 301 FADRVAWTAMLAGYAAHGLGREAIKLFESMANKGLEPDHVTFTHLLSACSHSGLVNEGKS 360
Query: 350 IFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTH 409
F M Y +EP+ +HY+CMVDLLGR G + DA ++I+ MP EP+A +WG+LLGACR H
Sbjct: 361 YFNVMSEVYGIEPRVDHYSCMVDLLGRCGLLNDAYEVIQNMPMEPNAGVWGALLGACRVH 420
Query: 410 MKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSW 469
++L + A+ L+ +EP + YI+LSN+Y++ + D A++R +++R + + PG S
Sbjct: 421 GNIELGKEVAEHLINMEPLDPRNYIMLSNMYSASRSWKDAAKVRALLKERGLKRTPGYSS 480
Query: 470 IEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSL 529
IE K H F D SHPE I LE++ G +R+AGY + +VL DV+EE K +
Sbjct: 481 IEYGNKNHHFFVGD-RSHPETEKIYSKLEELLGKIRKAGYSSKTEYVLQDVEEEVKEDMI 539
Query: 530 RYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHF 589
HSEKLA+A+GL+ EG + + KNLR+CGDCHS KLIS + R II+RD RFHHF
Sbjct: 540 NKHSEKLAIAFGLLVSKEGEALIITKNLRICGDCHSTAKLISLIEKRTIIIRDPKRFHHF 599
Query: 590 KDGLCSCRDYW 600
DG CSC DYW
Sbjct: 600 SDGFCSCADYW 610
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 98/176 (55%), Gaps = 9/176 (5%)
Query: 232 SVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASK 291
++L S S+ + R++HA++ + D ++ L+T Y K G +FD+ K
Sbjct: 44 ALLIAVNSCPSISNCREIHARVFKSLLYRDGFIGDQLVTCYNKLGYAEDALKLFDDMPHK 103
Query: 292 DIVMWNSIISGYAQYGLGEKSLKVFHEM-FSSGVMPDDVTLVGVLSACSYTGKVKEGREI 350
D+V WNS+ISG+++ SL F+ M F V P++VT++ ++SAC+ G + G+ I
Sbjct: 104 DLVSWNSLISGFSR--CLHMSLTAFYTMKFEMSVKPNEVTILSMISACN--GALDAGKYI 159
Query: 351 FE-SMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
+K +E K + ++++ G++G + A +L EA+P +P+ + W S++ A
Sbjct: 160 HGFGIKVGGTLEVKVAN--SLINMYGKSGDLTSACRLFEAIP-DPNTVSWNSIIAA 212
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 71/325 (21%), Positives = 126/325 (38%), Gaps = 53/325 (16%)
Query: 12 MVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRL---FDMMPEKDV 68
+V Y + G +A LF MP K++VSW ++ GF R + F+M + +
Sbjct: 80 LVTCYNKLGYAEDALKLFDDMPHKDLVSWNSLISGFSRCLHMSLTAFYTMKFEMSVKPNE 139
Query: 69 VAQTNMVLGYCQDGRVDEGREIFDEMPKKN----VISWTTMISGYVNNNRIDVARKLFEV 124
V +M+ C +G +D G+ I K V ++I+ Y + + A +LFE
Sbjct: 140 VTILSMI-SAC-NGALDAGKYIHGFGIKVGGTLEVKVANSLINMYGKSGDLTSACRLFEA 197
Query: 125 MPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQN---------- 174
+P+ N VSW +++ G ++ + F M + IL L Q
Sbjct: 198 IPDPNTVSWNSIIAAQVTNGCAREGIDYFNKMRRLGIEQDEGTILALLQACLHLGVGKLA 257
Query: 175 -----------------------------GEVQKARVVFDQMREKDDATWSGMIKVYERK 205
G + + VF ++ D W+ M+ Y
Sbjct: 258 ESIHGLMFCTGFGAKITIATALLDTYAKLGRLSASYGVFTEVGFADRVAWTAMLAGYAAH 317
Query: 206 GYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGR---QVHAQLVRCQFDVDV 262
G E I LF M +G+ + + +LS C+ ++ G+ V +++ + VD
Sbjct: 318 GLGREAIKLFESMANKGLEPDHVTFTHLLSACSHSGLVNEGKSYFNVMSEVYGIEPRVDH 377
Query: 263 YVASVLITMYIKCGELVKGKLIFDN 287
Y S ++ + +CG L + N
Sbjct: 378 Y--SCMVDLLGRCGLLNDAYEVIQN 400
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 82/183 (44%), Gaps = 31/183 (16%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEK--- 66
TA++ Y + G ++ + +F ++ + V+WT ML G+ +A +LF+ M K
Sbjct: 277 TALLDTYAKLGRLSASYGVFTEVGFADRVAWTAMLAGYAAHGLGREAIKLFESMANKGLE 336
Query: 67 -DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVM 125
D V T+++ G V+EG+ F+ M +++ +
Sbjct: 337 PDHVTFTHLLSACSHSGLVNEGKSYFNVMS------------------------EVYGIE 372
Query: 126 PEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQ-NGEVQKARVVF 184
P + S L+G +CG + DA+E+ + MPM+ +LG + +G ++ + V
Sbjct: 373 PRVDHYSCMVDLLG--RCGLLNDAYEVIQNMPMEPNAGVWGALLGACRVHGNIELGKEVA 430
Query: 185 DQM 187
+ +
Sbjct: 431 EHL 433
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 60/129 (46%), Gaps = 14/129 (10%)
Query: 7 VSWTAMVRGYVEEGMITEAGTLFWQMPEKNV----VSWTVMLGGFIRDSRIDDARRLFDM 62
V+WTAM+ GY G+ EA LF M K + V++T +L +++ + F++
Sbjct: 305 VAWTAMLAGYAAHGLGREAIKLFESMANKGLEPDHVTFTHLLSACSHSGLVNEGKSYFNV 364
Query: 63 M-------PEKDVVAQTNMVLGYCQDGRVDEGREIFDEMP-KKNVISWTTMISGYVNNNR 114
M P D + +LG C G +++ E+ MP + N W ++ +
Sbjct: 365 MSEVYGIEPRVDHYSCMVDLLGRC--GLLNDAYEVIQNMPMEPNAGVWGALLGACRVHGN 422
Query: 115 IDVARKLFE 123
I++ +++ E
Sbjct: 423 IELGKEVAE 431
>gi|15229764|ref|NP_187753.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169981|sp|Q9CAY1.1|PP223_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g11460
gi|12322902|gb|AAG51440.1|AC008153_13 hypothetical protein; 50785-52656 [Arabidopsis thaliana]
gi|332641528|gb|AEE75049.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 623
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 208/548 (37%), Positives = 321/548 (58%), Gaps = 21/548 (3%)
Query: 65 EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVIS--WTTMISGYVNNNRIDVARKLF 122
E + T ++ YC+ G V + R++F+E P+ + +S + +ISGY N+++ A +F
Sbjct: 85 ETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMF 144
Query: 123 EVMPEKN-EVSWTAMLMGYTQCGRIQDAW-------ELFKAMPMKSVVASNSMILGLGQN 174
M E V ML C + W + K V NS I +
Sbjct: 145 RRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKC 204
Query: 175 GEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVL 234
G V+ R +FD+M K TW+ +I Y + G +V++L+ M+ GV + +L+SVL
Sbjct: 205 GSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVL 264
Query: 235 SVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIV 294
S CA L + G +V + F +V+V++ I+MY +CG L K + +FD K +V
Sbjct: 265 SSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLV 324
Query: 295 MWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESM 354
W ++I Y +G+GE L +F +M G+ PD V VLSACS++G +G E+F +M
Sbjct: 325 SWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAM 384
Query: 355 KSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDL 414
K +Y +EP EHY+C+VDLLGRAG++++AM+ IE+MP EPD +WG+LLGAC+ H +D+
Sbjct: 385 KREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDM 444
Query: 415 AEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEK 474
AE+A K+++ EP N G Y+L+SNIY+ + +R MR+R K PG S++E +
Sbjct: 445 AELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYSYVEHKG 504
Query: 475 KVHMFTGRDCVSHPEHPMIMRMLEKI-GGLLREAGYCPDSSFVLHDVDEEEKVHS-LRYH 532
+VH+F D SH + + RML+++ ++ AG D D E+V S R H
Sbjct: 505 RVHLFLAGD-RSHEQTEEVHRMLDELETSVMELAGN--------MDCDRGEEVSSTTREH 555
Query: 533 SEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDG 592
SE+LA+A+G++ G I V+KNLRVC DCH +K +SK++ R+ ++RDA+RFH+FKDG
Sbjct: 556 SERLAIAFGILNSIPGTEILVIKNLRVCEDCHVFLKQVSKIVDRQFVVRDASRFHYFKDG 615
Query: 593 LCSCRDYW 600
+CSC+DYW
Sbjct: 616 VCSCKDYW 623
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 125/295 (42%), Gaps = 49/295 (16%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVS--WTVMLGGFIRDSRIDDARRLFDMMPEKD 67
TA++ Y + G++ +A +F + P+ + +S + ++ G+ +S++ DA +F M E
Sbjct: 92 TALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETG 151
Query: 68 VVAQTNMVLGYCQDGRVDE----GREIFDEMPK----KNVISWTTMISGYVNNNRIDVAR 119
V + +LG V E GR + + K V + I+ Y+ ++ R
Sbjct: 152 VSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGR 211
Query: 120 KLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMP---------------------- 157
+LF+ MP K ++W A++ GY+Q G D EL++ M
Sbjct: 212 RLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLG 271
Query: 158 -----------------MKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIK 200
+ +V SN+ I + G + KAR VFD M K +W+ MI
Sbjct: 272 AKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIG 331
Query: 201 VYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVR 255
Y G + LF M K G+R + + VLS C+ D G ++ + R
Sbjct: 332 CYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKR 386
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 67/305 (21%), Positives = 124/305 (40%), Gaps = 51/305 (16%)
Query: 210 EVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLI 269
E I L+ M + G + S +L CASL+ G+Q+H + + + + +V + LI
Sbjct: 36 ESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVTKGGCETEPFVLTALI 95
Query: 270 TMYIKCGELVKGKLIFDNF--ASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPD 327
+MY KCG + + +F+ +S+ V +N++ISGY + +F M +GV D
Sbjct: 96 SMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETGVSVD 155
Query: 328 DVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLI 387
VT++G++ C+ + GR + K ++ + + + + G VE +L
Sbjct: 156 SVTMLGLVPLCTVPEYLWLGRSL-HGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLF 214
Query: 388 EAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFH 447
+ MP + I W +++ Y+ G +
Sbjct: 215 DEMPVK-GLITWNAVISG----------------------------------YSQNGLAY 239
Query: 448 DVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREA 507
DV EL + M+ V P FT +S H ++ ++G L+
Sbjct: 240 DVLELYEQMKSSGVCPDP-------------FTLVSVLSSCAHLGAKKIGHEVGKLVESN 286
Query: 508 GYCPD 512
G+ P+
Sbjct: 287 GFVPN 291
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/266 (21%), Positives = 111/266 (41%), Gaps = 51/266 (19%)
Query: 7 VSWTAMVRGYVEEGMITEAGTLFWQMPEKNV-VSWTVMLG-------------------- 45
V + A++ GY +T+A +F +M E V V MLG
Sbjct: 122 VCYNALISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQ 181
Query: 46 ------------------GFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEG 87
+++ ++ RRLFD MP K ++ ++ GY Q+G +
Sbjct: 182 CVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDV 241
Query: 88 REIFDEMPKKNV----ISWTTMISGYVNNNRIDVARKLFEVMPEK----NEVSWTAMLMG 139
E++++M V + +++S + + ++ +++ N A +
Sbjct: 242 LELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISM 301
Query: 140 YTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREK----DDATW 195
Y +CG + A +F MP+KS+V+ +MI G +G + ++FD M ++ D A +
Sbjct: 302 YARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVF 361
Query: 196 SGMIKVYERKGYELEVIDLFTLMQKE 221
++ G + ++LF M++E
Sbjct: 362 VMVLSACSHSGLTDKGLELFRAMKRE 387
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 94/217 (43%), Gaps = 18/217 (8%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MP + +++W A++ GY + G+ + L+ QM V L + A+++
Sbjct: 217 MPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIG 276
Query: 61 DMMPE--------KDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+ + +V + Y + G + + R +FD MP K+++SWT MI Y +
Sbjct: 277 HEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMH 336
Query: 113 NRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVAS---- 164
++ LF+ M ++ + + +L + G ELF+AM + +
Sbjct: 337 GMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEH 396
Query: 165 -NSMILGLGQNGEVQKARVVFDQMR-EKDDATWSGMI 199
+ ++ LG+ G + +A + M E D A W ++
Sbjct: 397 YSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALL 433
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/236 (21%), Positives = 93/236 (39%), Gaps = 17/236 (7%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDM 62
+ V + + Y++ G + LF +MP K +++W ++ G+ ++ D L++
Sbjct: 188 DSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQ 247
Query: 63 MPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPK--------KNVISWTTMISGYVNNNR 114
M V ++ ++I E+ K NV IS Y
Sbjct: 248 MKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGN 307
Query: 115 IDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMIL----G 170
+ AR +F++MP K+ VSWTAM+ Y G + LF M + + ++ +
Sbjct: 308 LAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSA 367
Query: 171 LGQNGEVQKARVVFDQMR-----EKDDATWSGMIKVYERKGYELEVIDLFTLMQKE 221
+G K +F M+ E +S ++ + R G E ++ M E
Sbjct: 368 CSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVE 423
>gi|449450646|ref|XP_004143073.1| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial-like [Cucumis sativus]
Length = 610
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 200/551 (36%), Positives = 317/551 (57%), Gaps = 12/551 (2%)
Query: 58 RLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDV 117
R+F + +D +V Y + G ++ ++FD+MP K+++SW ++ISG+ + +
Sbjct: 64 RVFKSLLYRDGFIGDQLVTCYNKLGYAEDALKLFDDMPHKDLVSWNSLISGFSRCLHMSL 123
Query: 118 ARKL---FEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMK-----SVVASNSMIL 169
FE+ + NEV+ +M+ + C DA + +K V +NS+I
Sbjct: 124 TAFYTMKFEMSVKPNEVTILSMI---SACSGALDAGKYIHGFGIKVGGTLEVKVANSLIN 180
Query: 170 GLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPS 229
G++G++ A +F+ + + + +W+ +I G E ID F M++ G+ + +
Sbjct: 181 MYGKSGDLTSACRLFEAIPDPNTVSWNSIIAAQVTNGCAREGIDYFNKMRRLGIEQDEGT 240
Query: 230 LISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFA 289
++++L C L +H + F + +A+ L+ Y K G L +F
Sbjct: 241 ILALLQACLHLGVGKLAESIHGLMFCTGFGAKITIATALLDTYAKLGRLSASYGVFTEVG 300
Query: 290 SKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGRE 349
D V W ++++GYA +GLG +++K+F M + G+ PD VT +LSACS++G V EG+
Sbjct: 301 FADRVAWTAMLAGYAAHGLGREAIKLFESMANKGLEPDHVTFTHLLSACSHSGLVNEGKS 360
Query: 350 IFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTH 409
F M Y +EP+ +HY+CMVDLLGR G + DA ++I+ MP EP+A +WG+LLGACR H
Sbjct: 361 YFNVMSEVYGIEPRVDHYSCMVDLLGRCGLLNDAYEVIQNMPMEPNAGVWGALLGACRVH 420
Query: 410 MKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSW 469
++L + A+ L+ +EP + YI+LSN+Y++ + D A++R +++R + + PG S
Sbjct: 421 GNIELGKEVAEHLINMEPLDPRNYIMLSNMYSASRSWKDAAKVRALLKERGLKRTPGYSS 480
Query: 470 IEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSL 529
IE K H F D SHPE I LE++ G +R+AGY + +VL DV+EE K +
Sbjct: 481 IEYGNKNHHFFVGD-RSHPETEKIYSKLEELLGKIRKAGYSSKTEYVLQDVEEEVKEDMI 539
Query: 530 RYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHF 589
HSEKLA+A+GL+ EG + + KNLR+CGDCHS KLIS + R II+RD RFHHF
Sbjct: 540 NKHSEKLAIAFGLLVSKEGEALIITKNLRICGDCHSTAKLISLIEKRTIIIRDPKRFHHF 599
Query: 590 KDGLCSCRDYW 600
DG CSC DYW
Sbjct: 600 SDGFCSCADYW 610
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 98/176 (55%), Gaps = 9/176 (5%)
Query: 232 SVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASK 291
++L S S+ + R++HA++ + D ++ L+T Y K G +FD+ K
Sbjct: 44 ALLIAVNSCPSISNCREIHARVFKSLLYRDGFIGDQLVTCYNKLGYAEDALKLFDDMPHK 103
Query: 292 DIVMWNSIISGYAQYGLGEKSLKVFHEM-FSSGVMPDDVTLVGVLSACSYTGKVKEGREI 350
D+V WNS+ISG+++ SL F+ M F V P++VT++ ++SACS G + G+ I
Sbjct: 104 DLVSWNSLISGFSR--CLHMSLTAFYTMKFEMSVKPNEVTILSMISACS--GALDAGKYI 159
Query: 351 FE-SMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
+K +E K + ++++ G++G + A +L EA+P +P+ + W S++ A
Sbjct: 160 HGFGIKVGGTLEVKVAN--SLINMYGKSGDLTSACRLFEAIP-DPNTVSWNSIIAA 212
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 71/325 (21%), Positives = 125/325 (38%), Gaps = 53/325 (16%)
Query: 12 MVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRL---FDMMPEKDV 68
+V Y + G +A LF MP K++VSW ++ GF R + F+M + +
Sbjct: 80 LVTCYNKLGYAEDALKLFDDMPHKDLVSWNSLISGFSRCLHMSLTAFYTMKFEMSVKPNE 139
Query: 69 VAQTNMVLGYCQDGRVDEGREIFDEMPKKN----VISWTTMISGYVNNNRIDVARKLFEV 124
V +M+ C G +D G+ I K V ++I+ Y + + A +LFE
Sbjct: 140 VTILSMI-SACS-GALDAGKYIHGFGIKVGGTLEVKVANSLINMYGKSGDLTSACRLFEA 197
Query: 125 MPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQN---------- 174
+P+ N VSW +++ G ++ + F M + IL L Q
Sbjct: 198 IPDPNTVSWNSIIAAQVTNGCAREGIDYFNKMRRLGIEQDEGTILALLQACLHLGVGKLA 257
Query: 175 -----------------------------GEVQKARVVFDQMREKDDATWSGMIKVYERK 205
G + + VF ++ D W+ M+ Y
Sbjct: 258 ESIHGLMFCTGFGAKITIATALLDTYAKLGRLSASYGVFTEVGFADRVAWTAMLAGYAAH 317
Query: 206 GYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGR---QVHAQLVRCQFDVDV 262
G E I LF M +G+ + + +LS C+ ++ G+ V +++ + VD
Sbjct: 318 GLGREAIKLFESMANKGLEPDHVTFTHLLSACSHSGLVNEGKSYFNVMSEVYGIEPRVDH 377
Query: 263 YVASVLITMYIKCGELVKGKLIFDN 287
Y S ++ + +CG L + N
Sbjct: 378 Y--SCMVDLLGRCGLLNDAYEVIQN 400
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 82/183 (44%), Gaps = 31/183 (16%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEK--- 66
TA++ Y + G ++ + +F ++ + V+WT ML G+ +A +LF+ M K
Sbjct: 277 TALLDTYAKLGRLSASYGVFTEVGFADRVAWTAMLAGYAAHGLGREAIKLFESMANKGLE 336
Query: 67 -DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVM 125
D V T+++ G V+EG+ F+ M +++ +
Sbjct: 337 PDHVTFTHLLSACSHSGLVNEGKSYFNVMS------------------------EVYGIE 372
Query: 126 PEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQ-NGEVQKARVVF 184
P + S L+G +CG + DA+E+ + MPM+ +LG + +G ++ + V
Sbjct: 373 PRVDHYSCMVDLLG--RCGLLNDAYEVIQNMPMEPNAGVWGALLGACRVHGNIELGKEVA 430
Query: 185 DQM 187
+ +
Sbjct: 431 EHL 433
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 60/129 (46%), Gaps = 14/129 (10%)
Query: 7 VSWTAMVRGYVEEGMITEAGTLFWQMPEKNV----VSWTVMLGGFIRDSRIDDARRLFDM 62
V+WTAM+ GY G+ EA LF M K + V++T +L +++ + F++
Sbjct: 305 VAWTAMLAGYAAHGLGREAIKLFESMANKGLEPDHVTFTHLLSACSHSGLVNEGKSYFNV 364
Query: 63 M-------PEKDVVAQTNMVLGYCQDGRVDEGREIFDEMP-KKNVISWTTMISGYVNNNR 114
M P D + +LG C G +++ E+ MP + N W ++ +
Sbjct: 365 MSEVYGIEPRVDHYSCMVDLLGRC--GLLNDAYEVIQNMPMEPNAGVWGALLGACRVHGN 422
Query: 115 IDVARKLFE 123
I++ +++ E
Sbjct: 423 IELGKEVAE 431
>gi|302807997|ref|XP_002985693.1| hypothetical protein SELMODRAFT_122934 [Selaginella moellendorffii]
gi|300146602|gb|EFJ13271.1| hypothetical protein SELMODRAFT_122934 [Selaginella moellendorffii]
Length = 706
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 215/616 (34%), Positives = 341/616 (55%), Gaps = 22/616 (3%)
Query: 2 PERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV----VSWTVMLGGFIRDSRIDDAR 57
P +NV SWT ++ + G EA LF++M ++ + VS+T + A
Sbjct: 96 PAKNVFSWTILITVCAQHGRSQEALALFYEMLKQGIQPHSVSFTAAINACSAGPEFLPAG 155
Query: 58 RLFDMMPEK-----DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
R + + VVA T++V Y + G ++E + F+ M + N +SW MI+ + +
Sbjct: 156 RALHALLRRYGFQDAVVATTSLVSMYSKCGSLEESVKTFESMTELNAVSWNAMIAAFAEH 215
Query: 113 NR----IDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPM----KSVVAS 164
R + +K+F V++ ++ Y Q +++ A + + + VV
Sbjct: 216 RRGLEALRTLQKMFLEGIRACSVTYITLMSAYDQPSQLKSARYIHDCILRTGFDQDVV-- 273
Query: 165 NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVR 224
N ++ G+ G +Q A +F M + D W+ MI Y + G+ E + + LMQ+EGV
Sbjct: 274 NVILNMYGKCGCLQDAEAMFKSMSQPDVIAWNTMIAAYSQHGHTSEALRFYELMQEEGVV 333
Query: 225 VNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLI 284
+ + +SV+ CA+L ++ G+QVH +L F V +A+ L+ MY KCG L + I
Sbjct: 334 PDDYTYVSVIDACATLGDMEVGKQVHRRLGDRAFQV-TELANSLVNMYGKCGILDVARSI 392
Query: 285 FDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKV 344
FD A K V WN++I YAQ+ +++ ++F M G P +T + VLSAC+ G
Sbjct: 393 FDKTA-KGSVTWNAMIGAYAQHSHEQQAFELFLLMRLDGEEPSYITFMSVLSACANAGLP 451
Query: 345 KEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLG 404
+E F M+ + V P HY CMV+ LG+AG++ DA LI+ MPFEPD + W S L
Sbjct: 452 EEAHSYFVCMQQDHGVRPGGGHYGCMVESLGKAGRLSDAEALIQGMPFEPDVLTWTSFLA 511
Query: 405 ACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKP 464
CR+H + + AAK ++++P+ + Y+ L+ I+A G F + + +RK M R + K
Sbjct: 512 NCRSHGDMKRGKFAAKGAIRIDPEASTGYVALARIHADAGDFQEASRIRKLMLDRGIRKN 571
Query: 465 PGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEE 524
G S I++ V+ FT D S+P I L+++ ++ AGY PD + V HDV+ +
Sbjct: 572 AGRSIIKLGTSVYEFTAGD-QSNPRSKEIFDELKRLDKEMKRAGYDPDMTHVAHDVEAGQ 630
Query: 525 KVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDAN 584
K L HSE+LA+A+G++ +G P+R+MKNLRVCGDCH+ KL SK+ REII+RD+N
Sbjct: 631 KEPLLFAHSERLAIAFGIISTSQGTPLRIMKNLRVCGDCHAMTKLTSKITRREIIVRDSN 690
Query: 585 RFHHFKDGLCSCRDYW 600
RFHHFK+G CSC+D+W
Sbjct: 691 RFHHFKNGSCSCKDFW 706
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 99/382 (25%), Positives = 185/382 (48%), Gaps = 17/382 (4%)
Query: 37 VVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPK 96
V+ LG RI R + DV ++V+ Y + G ++E R +F+ P
Sbjct: 40 VIQSCARLGALAEGRRIHQLIRRVGL--GSDVYVSNHLVMMYGKCGSLEEARLVFEATPA 97
Query: 97 KNVISWTTMISGYVNNNRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWEL 152
KNV SWT +I+ + R A LF M ++ + VS+TA + + A
Sbjct: 98 KNVFSWTILITVCAQHGRSQEALALFYEMLKQGIQPHSVSFTAAINACSAGPEFLPAGRA 157
Query: 153 FKAMPMK-----SVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGY 207
A+ + +VVA+ S++ + G ++++ F+ M E + +W+ MI +
Sbjct: 158 LHALLRRYGFQDAVVATTSLVSMYSKCGSLEESVKTFESMTELNAVSWNAMIAAFAEHRR 217
Query: 208 ELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASV 267
LE + M EG+R + I+++S + L R +H ++R FD D V +V
Sbjct: 218 GLEALRTLQKMFLEGIRACSVTYITLMSAYDQPSQLKSARYIHDCILRTGFDQD--VVNV 275
Query: 268 LITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPD 327
++ MY KCG L + +F + + D++ WN++I+ Y+Q+G ++L+ + M GV+PD
Sbjct: 276 ILNMYGKCGCLQDAEAMFKSMSQPDVIAWNTMIAAYSQHGHTSEALRFYELMQEEGVVPD 335
Query: 328 DVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLI 387
D T V V+ AC+ G ++ G+++ + + TE +V++ G+ G ++ A +
Sbjct: 336 DYTYVSVIDACATLGDMEVGKQVHRRLGDRAF--QVTELANSLVNMYGKCGILDVARSIF 393
Query: 388 EAMPFEPDAIIWGSLLGACRTH 409
+ ++ W +++GA H
Sbjct: 394 DKTA--KGSVTWNAMIGAYAQH 413
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 109/217 (50%), Gaps = 2/217 (0%)
Query: 225 VNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLI 284
+ + V+ CA L +L GR++H + R DVYV++ L+ MY KCG L + +L+
Sbjct: 32 ADLKECVRVIQSCARLGALAEGRRIHQLIRRVGLGSDVYVSNHLVMMYGKCGSLEEARLV 91
Query: 285 FDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKV 344
F+ +K++ W +I+ AQ+G +++L +F+EM G+ P V+ ++ACS +
Sbjct: 92 FEATPAKNVFSWTILITVCAQHGRSQEALALFYEMLKQGIQPHSVSFTAAINACSAGPEF 151
Query: 345 KEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLG 404
++ +Y + +V + + G +E+++K E+M E +A+ W +++
Sbjct: 152 LPAGRALHALLRRYGFQDAVVATTSLVSMYSKCGSLEESVKTFESMT-ELNAVSWNAMIA 210
Query: 405 ACRTHMK-LDLAEVAAKKLLQLEPKNAGPYILLSNIY 440
A H + L+ K L+ + YI L + Y
Sbjct: 211 AFAEHRRGLEALRTLQKMFLEGIRACSVTYITLMSAY 247
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 155/328 (47%), Gaps = 28/328 (8%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV----VSWTVMLGGFIRDSRIDDA 56
M E N VSW AM+ + E EA +M + + V++ ++ + + S++ A
Sbjct: 197 MTELNAVSWNAMIAAFAEHRRGLEALRTLQKMFLEGIRACSVTYITLMSAYDQPSQLKSA 256
Query: 57 RRLFDMMP----EKDVVAQTNMVLG-YCQDGRVDEGREIFDEMPKKNVISWTTMISGYVN 111
R + D + ++DVV N++L Y + G + + +F M + +VI+W TMI+ Y
Sbjct: 257 RYIHDCILRTGFDQDVV---NVILNMYGKCGCLQDAEAMFKSMSQPDVIAWNTMIAAYSQ 313
Query: 112 NNRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVAS--- 164
+ A + +E+M E+ ++ ++ +++ G ++ ++ + + ++ +
Sbjct: 314 HGHTSEALRFYELMQEEGVVPDDYTYVSVIDACATLGDMEVGKQVHRRLGDRAFQVTELA 373
Query: 165 NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVR 224
NS++ G+ G + AR +FD+ K TW+ MI Y + +E + +LF LM+ +G
Sbjct: 374 NSLVNMYGKCGILDVARSIFDKT-AKGSVTWNAMIGAYAQHSHEQQAFELFLLMRLDGEE 432
Query: 225 VNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVA----SVLITMYIKCGELVK 280
++ + +SVLS CA+ A L + H+ V Q D V ++ K G L
Sbjct: 433 PSYITFMSVLSACAN-AGLP--EEAHSYFVCMQQDHGVRPGGGHYGCMVESLGKAGRLSD 489
Query: 281 GKLIFDNFA-SKDIVMWNSIISGYAQYG 307
+ + D++ W S ++ +G
Sbjct: 490 AEALIQGMPFEPDVLTWTSFLANCRSHG 517
>gi|224082530|ref|XP_002306730.1| predicted protein [Populus trichocarpa]
gi|222856179|gb|EEE93726.1| predicted protein [Populus trichocarpa]
Length = 578
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 201/519 (38%), Positives = 315/519 (60%), Gaps = 11/519 (2%)
Query: 91 FDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKN-EVSWTAMLMGYTQCGR---- 145
F ++ + W +I G++ + A ++ M K+ +V C R
Sbjct: 62 FSQIRTPSTNDWNAIIRGFIQSPNPTNAFAWYKSMISKSRKVDALTCSFVLKACARVLAR 121
Query: 146 ---IQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVY 202
IQ + + + + +++ + GE+ A VFD+M ++D A+W+ +I +
Sbjct: 122 LESIQIHTHIVRKGFIADALLGTTLLDVYAKVGEIDSAEKVFDEMVKRDIASWNALISGF 181
Query: 203 ERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDV 262
+ E + LF M+ +G + N S++ LS CA L G ++H + +FD++
Sbjct: 182 AQGSKPTEALSLFKRMEIDGFKPNEISVLGALSACAQLGDFKEGEKIHGYIKVERFDMNA 241
Query: 263 YVASVLITMYIKCGELVKGKLIFDNFAS-KDIVMWNSIISGYAQYGLGEKSLKVFHEMFS 321
V +V+I MY KCG + K L+F++ + KDIV WN++I +A +G G K+L++F +M
Sbjct: 242 QVCNVVIDMYAKCGFVDKAYLVFESMSCRKDIVTWNTMIMAFAMHGEGCKALELFEKMDQ 301
Query: 322 SGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVE 381
SGV PDDV+ + VL AC++ G V+EG +F SM++ V+P +HY +VDLLGRAG++
Sbjct: 302 SGVSPDDVSYLAVLCACNHGGLVEEGFRLFNSMEN-CGVKPNVKHYGSVVDLLGRAGRLH 360
Query: 382 DAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYA 441
+A ++ +MP PD ++W +LLGA RTH +++AE ++KL+++ + G ++LLSN+YA
Sbjct: 361 EAYDIVNSMPTVPDIVLWQTLLGASRTHRNVEIAETVSRKLVEMGSNHCGDFVLLSNVYA 420
Query: 442 SQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIG 501
++ R+ DV +R+ M+ R+V K PG S+IE +H F D SH I L++I
Sbjct: 421 ARERWADVGRVREAMKNRDVKKVPGLSYIEGNGVIHKFYNAD-KSHESWREIYAKLDEIR 479
Query: 502 GLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCG 561
++E GY ++SFVLHD+ EE+K + L +HSEKLAVA+GL+ EG PI+V+KNLR+CG
Sbjct: 480 FRVKEYGYVAETSFVLHDIGEEDKENVLGHHSEKLAVAFGLISTSEGTPIQVIKNLRICG 539
Query: 562 DCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
DCH IKLISK+ REII+RD RFH FK+G CSCRDYW
Sbjct: 540 DCHFVIKLISKIYDREIIVRDRVRFHRFKEGFCSCRDYW 578
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 115/235 (48%), Gaps = 1/235 (0%)
Query: 175 GEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVL 234
G + A + F Q+R W+ +I+ + + + M + +V+ + VL
Sbjct: 53 GNLSFAILTFSQIRTPSTNDWNAIIRGFIQSPNPTNAFAWYKSMISKSRKVDALTCSFVL 112
Query: 235 SVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIV 294
CA + + Q+H +VR F D + + L+ +Y K GE+ + +FD +DI
Sbjct: 113 KACARVLARLESIQIHTHIVRKGFIADALLGTTLLDVYAKVGEIDSAEKVFDEMVKRDIA 172
Query: 295 MWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESM 354
WN++ISG+AQ ++L +F M G P++++++G LSAC+ G KEG +I +
Sbjct: 173 SWNALISGFAQGSKPTEALSLFKRMEIDGFKPNEISVLGALSACAQLGDFKEGEKIHGYI 232
Query: 355 KSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTH 409
K + + + ++D+ + G V+ A + E+M D + W +++ A H
Sbjct: 233 KVERF-DMNAQVCNVVIDMYAKCGFVDKAYLVFESMSCRKDIVTWNTMIMAFAMH 286
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 73/319 (22%), Positives = 145/319 (45%), Gaps = 20/319 (6%)
Query: 2 PERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEK----NVVSWTVMLGGFIRDSRIDDAR 57
P N W A++RG+++ T A + M K + ++ + +L R ++
Sbjct: 68 PSTN--DWNAIIRGFIQSPNPTNAFAWYKSMISKSRKVDALTCSFVLKACARVLARLESI 125
Query: 58 RLFDMMPEKDVVAQ----TNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNN 113
++ + K +A T ++ Y + G +D ++FDEM K+++ SW +ISG+ +
Sbjct: 126 QIHTHIVRKGFIADALLGTTLLDVYAKVGEIDSAEKVFDEMVKRDIASWNALISGFAQGS 185
Query: 114 RIDVARKLFEVMP----EKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMK----SVVASN 165
+ A LF+ M + NE+S L Q G ++ ++ + ++ + N
Sbjct: 186 KPTEALSLFKRMEIDGFKPNEISVLGALSACAQLGDFKEGEKIHGYIKVERFDMNAQVCN 245
Query: 166 SMILGLGQNGEVQKARVVFDQMR-EKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVR 224
+I + G V KA +VF+ M KD TW+ MI + G + ++LF M + GV
Sbjct: 246 VVIDMYAKCGFVDKAYLVFESMSCRKDIVTWNTMIMAFAMHGEGCKALELFEKMDQSGVS 305
Query: 225 VNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLI 284
+ S ++VL C ++ G ++ + C +V ++ + + G L + I
Sbjct: 306 PDDVSYLAVLCACNHGGLVEEGFRLFNSMENCGVKPNVKHYGSVVDLLGRAGRLHEAYDI 365
Query: 285 FDNFAS-KDIVMWNSIISG 302
++ + DIV+W +++
Sbjct: 366 VNSMPTVPDIVLWQTLLGA 384
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 101/209 (48%), Gaps = 27/209 (12%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM------PEK----NVVSWTVMLGGFIRD 50
M +R++ SW A++ G+ + TEA +LF +M P + +S LG F
Sbjct: 166 MVKRDIASWNALISGFAQGSKPTEALSLFKRMEIDGFKPNEISVLGALSACAQLGDFKEG 225
Query: 51 SRIDDARRL--FDMMPEKDVVAQTNMVLG-YCQDGRVDEGREIFDEMP-KKNVISWTTMI 106
+I ++ FDM + N+V+ Y + G VD+ +F+ M +K++++W TMI
Sbjct: 226 EKIHGYIKVERFDMNAQ-----VCNVVIDMYAKCGFVDKAYLVFESMSCRKDIVTWNTMI 280
Query: 107 SGYVNNNRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAMP----M 158
+ + A +LFE M + ++VS+ A+L G +++ + LF +M
Sbjct: 281 MAFAMHGEGCKALELFEKMDQSGVSPDDVSYLAVLCACNHGGLVEEGFRLFNSMENCGVK 340
Query: 159 KSVVASNSMILGLGQNGEVQKARVVFDQM 187
+V S++ LG+ G + +A + + M
Sbjct: 341 PNVKHYGSVVDLLGRAGRLHEAYDIVNSM 369
>gi|297738270|emb|CBI27471.3| unnamed protein product [Vitis vinifera]
Length = 574
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 209/566 (36%), Positives = 333/566 (58%), Gaps = 32/566 (5%)
Query: 49 RDSRIDDARRLFDMMPEKDVVAQ---TNMVLGYC---QDGRVDEGREIFDEMPKKNVISW 102
R S +++ R++ M + ++ + +L +C G + R +FD + + N W
Sbjct: 27 RCSNMEELRQIHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYARTVFDRIFRPNTFMW 86
Query: 103 TTMISGYVNNNRIDVARKLFEVM----PEKNEVSWTAMLMGYTQCGRIQDAWEL----FK 154
TMI GY N+ + A L+ M N ++ +L + +++ ++ K
Sbjct: 87 NTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSALEETQQIHAHIIK 146
Query: 155 AMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDL 214
+ +NS++ ++G+++ AR++FDQ+ ++D E ++L
Sbjct: 147 MGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDT-----------------EALNL 189
Query: 215 FTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIK 274
F MQ G++++ +L+S L CA L LD G+ +HA + + + ++D + VLI MY K
Sbjct: 190 FHRMQTAGIKLDNVALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAK 249
Query: 275 CGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGV 334
CG+L + +F K + +W ++ISGYA +G G ++L+ F +M ++GV P+ +T G+
Sbjct: 250 CGDLEEAIEVFRKMEEKGVSVWTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGI 309
Query: 335 LSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEP 394
L+ACS+ G V E + +FESM+ + +P EHY CMVDLLGRAG +++A +LIE MP +P
Sbjct: 310 LTACSHAGLVHEAKLLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKP 369
Query: 395 DAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRK 454
+A IWG+LL AC H L+L + K L+Q++P + G YI L++I+A+ G ++ A +R+
Sbjct: 370 NAAIWGALLNACHIHGNLELGKQIGKILIQVDPGHGGRYIHLASIHAAAGEWNQAARVRR 429
Query: 455 NMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSS 514
M+++ V K PGCS I V H F D SHP+ I MLE+I LRE GY P
Sbjct: 430 QMKEQGVSKLPGCSVISVNGTAHEFLAGD-ESHPQIKEIDHMLEQIVERLREEGYKPKLG 488
Query: 515 FVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVM 574
+L D++++EK ++ +HSEKLAV +GL+ G+ IR++KNLRVC DCH+ IKLISKV
Sbjct: 489 DLLLDLEDKEKETAIHHHSEKLAVTFGLISTKPGMTIRIVKNLRVCEDCHTVIKLISKVY 548
Query: 575 GREIILRDANRFHHFKDGLCSCRDYW 600
REI++RD RFH FKDG C+C DYW
Sbjct: 549 AREILMRDRTRFHLFKDGNCTCGDYW 574
Score = 42.4 bits (98), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 62/135 (45%), Gaps = 10/135 (7%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMP----EKNVVSWTVMLGGFIRDSRIDDA 56
M E+ V WTAM+ GY G EA F +M E N +++T +L + +A
Sbjct: 263 MEEKGVSVWTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEA 322
Query: 57 RRLFDMMP-----EKDVVAQTNMVLGYCQDGRVDEGREIFDEMP-KKNVISWTTMISGYV 110
+ LF+ M + + MV + G + E E+ + MP K N W +++
Sbjct: 323 KLLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGALLNACH 382
Query: 111 NNNRIDVARKLFEVM 125
+ +++ +++ +++
Sbjct: 383 IHGNLELGKQIGKIL 397
>gi|356521885|ref|XP_003529581.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g15720-like [Glycine max]
Length = 603
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 198/550 (36%), Positives = 323/550 (58%), Gaps = 16/550 (2%)
Query: 65 EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEV 124
D A +++ Y + +D +++FDEMP +NV+SWT++++GYV+ + ++A LF
Sbjct: 56 SNDTFATNHLINCYLRLFTIDHAQKLFDEMPHRNVVSWTSLMAGYVSQGQPNMALCLFHQ 115
Query: 125 MPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAMPMK----SVVASNSMILGLGQNGE 176
M NE ++ ++ + ++ + + + ++VA +S+I G+
Sbjct: 116 MQGTLVLPNEFTFATLINACSILANLEIGRRIHALVEVSGLGSNLVACSSLIDMYGKCNH 175
Query: 177 VQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPS---LISV 233
V +AR++FD M ++ +W+ MI Y + + LF R++ P+ L S
Sbjct: 176 VDEARLIFDSMCTRNVVSWTSMITTYSQNAQGHHALQLFKEFNHS--RLDKPNHFMLCSA 233
Query: 234 LSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDI 293
+S CASL SL G+ H ++R + +AS L+ MY KCG + IF + +
Sbjct: 234 VSACASLGSLGSGKITHGVVIRLGHEASDVIASALVDMYAKCGCVNYSAKIFRRIQNPSV 293
Query: 294 VMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFES 353
+ + S+I G A+YGLG SL++F EM + P+D+T VGVL ACS++G V +G E+ +S
Sbjct: 294 IPYTSMIVGAAKYGLGILSLQLFQEMVVRRIKPNDITFVGVLHACSHSGLVDKGLELLDS 353
Query: 354 MKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPD--AIIWGSLLGACRTHMK 411
M KY V P +HY C+ D+LGR G++E+A +L +++ E D A++WG+LL A R + +
Sbjct: 354 MDGKYGVTPDAKHYTCIADMLGRVGRIEEAYQLAKSVQVEGDGYAMLWGTLLSASRLYGR 413
Query: 412 LDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIE 471
+D+A A+ +L++ + AG Y+ LSN YA G + + LR M+ V K PG SWIE
Sbjct: 414 VDIALEASNRLIESNQQVAGAYVTLSNAYALAGDWENAHNLRSEMKHTGVYKEPGSSWIE 473
Query: 472 VEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDS-SFVLHDVDEEEKVHSLR 530
+++ ++F D + + I+ +L ++ ++ GY + V DV+EE K +
Sbjct: 474 IKESTYLFHAGDISKYTQGREILSLLRELEERMKGRGYVGGTKGLVFVDVEEEAKEEIVS 533
Query: 531 YHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFK 590
HSEKLA+A+GL+ P+GV IR+MKNLR+C DCH A KLIS ++ RE+++RD NRFHHFK
Sbjct: 534 MHSEKLALAFGLINTPKGVTIRIMKNLRMCRDCHGAFKLISDIVERELVVRDVNRFHHFK 593
Query: 591 DGLCSCRDYW 600
+GLC+C D+W
Sbjct: 594 NGLCTCGDFW 603
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 123/268 (45%), Gaps = 21/268 (7%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEK----NVVSWTVMLGGFIRDSRIDDA 56
MP RNVVSWT+++ GYV +G A LF QM N ++ ++ + ++
Sbjct: 85 MPHRNVVSWTSLMAGYVSQGQPNMALCLFHQMQGTLVLPNEFTFATLINACSILANLEIG 144
Query: 57 RRLFDMMP----EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
RR+ ++ ++VA ++++ Y + VDE R IFD M +NV+SWT+MI+ Y N
Sbjct: 145 RRIHALVEVSGLGSNLVACSSLIDMYGKCNHVDEARLIFDSMCTRNVVSWTSMITTYSQN 204
Query: 113 NRIDVARKLFEVMPEK-----------NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSV 161
+ A +LF+ + VS A L G G+I + V
Sbjct: 205 AQGHHALQLFKEFNHSRLDKPNHFMLCSAVSACASL-GSLGSGKITHGVVIRLGHEASDV 263
Query: 162 VASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKE 221
+AS +++ + G V + +F +++ ++ MI + G + + LF M
Sbjct: 264 IAS-ALVDMYAKCGCVNYSAKIFRRIQNPSVIPYTSMIVGAAKYGLGILSLQLFQEMVVR 322
Query: 222 GVRVNFPSLISVLSVCASLASLDHGRQV 249
++ N + + VL C+ +D G ++
Sbjct: 323 RIKPNDITFVGVLHACSHSGLVDKGLEL 350
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 87/176 (49%), Gaps = 9/176 (5%)
Query: 230 LISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFA 289
++ L C L S H+ +V+ D + + LI Y++ + + +FD
Sbjct: 30 FVAKLQTCKDLTS---ATSTHSNVVKSGLSNDTFATNHLINCYLRLFTIDHAQKLFDEMP 86
Query: 290 SKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGRE 349
+++V W S+++GY G +L +FH+M + V+P++ T +++ACS ++ GR
Sbjct: 87 HRNVVSWTSLMAGYVSQGQPNMALCLFHQMQGTLVLPNEFTFATLINACSILANLEIGRR 146
Query: 350 IFESMKSKYLVEPKTEHYAC--MVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
I ++ L + AC ++D+ G+ V++A + ++M + + W S++
Sbjct: 147 IHALVEVSGL---GSNLVACSSLIDMYGKCNHVDEARLIFDSMC-TRNVVSWTSMI 198
>gi|225434804|ref|XP_002280428.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic [Vitis vinifera]
Length = 658
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 215/615 (34%), Positives = 347/615 (56%), Gaps = 35/615 (5%)
Query: 12 MVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSR----IDDARRLFDMMPEKD 67
+++ ++G + +A + Q P ++ +++ R + ID R L ++D
Sbjct: 53 LIQSLCKQGNLNQALQVLSQEPNPTQHTYELLILSCTRQNSLPQGIDLHRHLIHDGSDQD 112
Query: 68 VVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTM-----ISGYVNNNRIDVARKLF 122
T ++ Y + +D R++FD+ K+ + W + ++GY R++
Sbjct: 113 PFLATKLINMYSELDSIDNARKVFDKTRKRTIYVWNALFRALTLAGY--------GREVL 164
Query: 123 EVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKS---------------VVASNSM 167
++ N + + YT + A E F ++ + V ++
Sbjct: 165 DLYRRMNRIGVPSDRFTYTYVLKACVASEAFVSLLLNGREIHGHILRHGFEGHVHIMTTL 224
Query: 168 ILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLF--TLMQKEGVRV 225
+ + G V A VFDQM K+ +WS MI Y + G LE ++LF +++ + +
Sbjct: 225 LDMYARFGCVLNASRVFDQMPVKNVVSWSAMIACYSKNGKPLEALELFRKMMLENQDLLP 284
Query: 226 NFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIF 285
N +++SVL CA+LA+L+ G+ +H ++R D + V S L+T+Y +CG L G +F
Sbjct: 285 NSVTMVSVLQACAALAALEQGKLMHGYILRRGLDSILPVVSALVTVYARCGNLELGHRVF 344
Query: 286 DNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVK 345
+ +D+V WNS+IS Y +G G K++++F EM G+ P ++ V VL ACS+ G V+
Sbjct: 345 ERMEKRDVVSWNSLISSYGIHGFGRKAIQIFKEMIDQGLSPSPISFVSVLGACSHAGLVE 404
Query: 346 EGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
EG+ +FESM + + P EHYACMVDLLGRA ++++A K+I+ M EP +WGSLLG+
Sbjct: 405 EGKVLFESMVRGHKIFPSVEHYACMVDLLGRANRLDEAAKIIDDMRIEPGPKVWGSLLGS 464
Query: 406 CRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPP 465
CR H ++LAE A +L +LEP NAG Y+LL++IYA +++V ++ + R + K P
Sbjct: 465 CRIHCNVELAERATSRLFELEPTNAGNYVLLADIYAEAKMWNEVKRVKMLLEARGLQKVP 524
Query: 466 GCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEK 525
G S IE+ +K++ F D + P+ + +L K+ ++E GY PD+ VL+D+D EEK
Sbjct: 525 GRSCIEIRRKIYSFMSVDEFN-PQIEQLHALLLKLSMEMKEKGYVPDTKVVLYDLDPEEK 583
Query: 526 VHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANR 585
+ HSEKLA+A+GL+ +G IR+ KNLR+C DCHS K ISK REI++RD NR
Sbjct: 584 ERIVLGHSEKLALAFGLINSKKGETIRITKNLRLCEDCHSVTKFISKFANREILVRDVNR 643
Query: 586 FHHFKDGLCSCRDYW 600
FH F+DG+CSC DYW
Sbjct: 644 FHLFQDGVCSCGDYW 658
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/248 (21%), Positives = 103/248 (41%), Gaps = 51/248 (20%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF-- 60
E +V T ++ Y G + A +F QMP KNVVSW+ M+ + ++ + +A LF
Sbjct: 215 EGHVHIMTTLLDMYARFGCVLNASRVFDQMPVKNVVSWSAMIACYSKNGKPLEALELFRK 274
Query: 61 ------DMMPEKDVVAQ---------------------------------TNMVLGYCQD 81
D++P + + +V Y +
Sbjct: 275 MMLENQDLLPNSVTMVSVLQACAALAALEQGKLMHGYILRRGLDSILPVVSALVTVYARC 334
Query: 82 GRVDEGREIFDEMPKKNVISWTTMISGY----VNNNRIDVARKLFEVMPEKNEVSWTAML 137
G ++ G +F+ M K++V+SW ++IS Y I + +++ + + +S+ ++L
Sbjct: 335 GNLELGHRVFERMEKRDVVSWNSLISSYGIHGFGRKAIQIFKEMIDQGLSPSPISFVSVL 394
Query: 138 MGYTQCGRIQDAWELFKAMP-----MKSVVASNSMILGLGQNGEVQKARVVFDQMR-EKD 191
+ G +++ LF++M SV M+ LG+ + +A + D MR E
Sbjct: 395 GACSHAGLVEEGKVLFESMVRGHKIFPSVEHYACMVDLLGRANRLDEAAKIIDDMRIEPG 454
Query: 192 DATWSGMI 199
W ++
Sbjct: 455 PKVWGSLL 462
>gi|449451271|ref|XP_004143385.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Cucumis sativus]
Length = 623
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 200/542 (36%), Positives = 318/542 (58%), Gaps = 17/542 (3%)
Query: 71 QTNMVLGYCQDGRVDEGREIFDE--MPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEK 128
QT ++ YC+ VD R++F+E +K + + ++SGYV+N++ A LF M E+
Sbjct: 87 QTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSEAVLLFRQMNEE 146
Query: 129 NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKS--------VVASNSMILGLGQNGEVQKA 180
+ L+G EL ++ + V N I + G V A
Sbjct: 147 GVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFITMYMKCGSVNYA 206
Query: 181 RVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASL 240
+ +FD+M K +W+ M+ Y + G V++L+ M GV + +L+ VLS CA+L
Sbjct: 207 QKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVTLVGVLSSCANL 266
Query: 241 ASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSII 300
+ G +V ++ F + ++ + LI MY +CG L K + +FD + +V W +II
Sbjct: 267 GAQSVGHEVEFKIQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGMPERTLVSWTAII 326
Query: 301 SGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLV 360
GY +G GE ++++F EM SG+ PD V VLSACS+ G +G E F+ MK Y +
Sbjct: 327 GGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGLEYFKMMKRNYQL 386
Query: 361 EPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAK 420
EP EHY+CMVDLLGRAG++++A LIE+MP +PD +WG+LLGAC+ H ++LAE+A +
Sbjct: 387 EPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGACKIHKNVELAELAFE 446
Query: 421 KLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFT 480
++++LEP+N G Y+LLSNIY++ V +R M+++ + K PGCS++E++ +VH F
Sbjct: 447 RVIELEPENIGYYVLLSNIYSNANNSKGVLRIRIMMKEKKLKKDPGCSYVELKGRVHPFI 506
Query: 481 GRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLR--YHSEKLAV 538
D +H + I R+LE++ ++ + P+ + +E K R HSEKLAV
Sbjct: 507 VGD-RNHLQSDEIYRVLEELEAIIMQEFGKPEKD----NREESNKDGFTRVGVHSEKLAV 561
Query: 539 AYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRD 598
A+GL+ G + ++KNLR+C DCH K++SK++ R++ +RDA RFHHF++G CSC+D
Sbjct: 562 AFGLLNTTTGAEVVIIKNLRICEDCHLFFKMVSKIVHRQLTVRDATRFHHFRNGSCSCKD 621
Query: 599 YW 600
YW
Sbjct: 622 YW 623
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 136/317 (42%), Gaps = 26/317 (8%)
Query: 6 VVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFI------------RDSRI 53
V + A+V GYV +EA LF QM E+ V +V L G I
Sbjct: 117 TVCYNALVSGYVSNSKCSEAVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHC 176
Query: 54 DDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN- 112
+ FD DV + Y + G V+ +++FDEMP K +ISW M+SGY N
Sbjct: 177 STLKYGFD----SDVSVVNCFITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNG 232
Query: 113 ---NRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWEL-FKAMP---MKSVVASN 165
N +++ R + + V+ +L G E+ FK + +N
Sbjct: 233 LATNVLELYRNMDMNGVHPDPVTLVGVLSSCANLGAQSVGHEVEFKIQASGFTSNPFLNN 292
Query: 166 SMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRV 225
++I + G + KA+ VFD M E+ +W+ +I Y G+ + LF M + G+
Sbjct: 293 ALINMYARCGNLTKAQAVFDGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEP 352
Query: 226 NFPSLISVLSVCASLASLDHGRQVHAQLVR-CQFDVDVYVASVLITMYIKCGELVKGKLI 284
+ + + VLS C+ D G + + R Q + S ++ + + G L + + +
Sbjct: 353 DGTAFVCVLSACSHAGLTDQGLEYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTL 412
Query: 285 FDNFASK-DIVMWNSII 300
++ K D +W +++
Sbjct: 413 IESMPIKPDGAVWGALL 429
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 104/212 (49%), Gaps = 6/212 (2%)
Query: 195 WSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLV 254
W+ ++ ++ L+ + L+ M + G R N + L CA+L+ G Q H Q+
Sbjct: 17 WNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQIT 76
Query: 255 RCQFDVDVYVASVLITMYIKCGELVKG--KLIFDNFASKDI-VMWNSIISGYAQYGLGEK 311
+ + +V + LI+MY K G LV K+ +NF S+ + V +N+++SGY +
Sbjct: 77 KVGCVFEPFVQTGLISMYCK-GSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSE 135
Query: 312 SLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMV 371
++ +F +M GV + VTL+G++ AC ++ G + S KY + C +
Sbjct: 136 AVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTL-KYGFDSDVSVVNCFI 194
Query: 372 DLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
+ + G V A KL + MP + I W +++
Sbjct: 195 TMYMKCGSVNYAQKLFDEMPVK-GLISWNAMV 225
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 111/251 (44%), Gaps = 19/251 (7%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRL- 59
MP + ++SW AMV GY + G+ T L+ M V V L G + A+ +
Sbjct: 213 MPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVTLVGVLSSCANLGAQSVG 272
Query: 60 ----FDMMPE---KDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
F + + ++ Y + G + + + +FD MP++ ++SWT +I GY +
Sbjct: 273 HEVEFKIQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGMPERTLVSWTAIIGGYGMH 332
Query: 113 NRIDVARKLFEVM----PEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVAS---- 164
++A +LF+ M E + ++ +L + G E FK M +
Sbjct: 333 GHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGLEYFKMMKRNYQLEPGPEH 392
Query: 165 -NSMILGLGQNGEVQKARVVFDQMREK-DDATWSGMIKVYE-RKGYELEVIDLFTLMQKE 221
+ M+ LG+ G +++A+ + + M K D A W ++ + K EL + +++ E
Sbjct: 393 YSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGACKIHKNVELAELAFERVIELE 452
Query: 222 GVRVNFPSLIS 232
+ + L+S
Sbjct: 453 PENIGYYVLLS 463
>gi|302823459|ref|XP_002993382.1| hypothetical protein SELMODRAFT_137057 [Selaginella moellendorffii]
gi|300138813|gb|EFJ05567.1| hypothetical protein SELMODRAFT_137057 [Selaginella moellendorffii]
Length = 655
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 205/643 (31%), Positives = 346/643 (53%), Gaps = 46/643 (7%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDM 62
E+ +VR Y I +A F ++ EKN S+ +M+G + + A +LF
Sbjct: 14 EKETFLGNCLVRAYGRCKSIDDAVAAFSEIAEKNEYSYAIMMGAYQENDLHKKALQLFKK 73
Query: 63 MPEKDVV---AQTNMVLGYCQ---DGRVDEGREIFDEMPKK----NVISWTTMISGYVNN 112
+++ A VL C + +++G+EI + +++ ++I Y
Sbjct: 74 SINEELQQNQATYVTVLKSCAHLGEDYLEDGKEIHRHAIAQGFGTDLVVQNSLIHMYAKC 133
Query: 113 NRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAM---------------- 156
A +FE M KN +S+T+M+ YT + +A+EL+K M
Sbjct: 134 GSFKFAAGVFEKMEPKNLISYTSMIQAYTHTAKHVEAYELYKKMLSEGIMPDIYAYAAAL 193
Query: 157 -------------------PMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSG 197
++ V SN+++ G+ G + A+ VFD +R KD A+++
Sbjct: 194 AVCPTIREGEAIHVKLGNHERRTPVCSNALVGMYGRFGRIASAKWVFDGIRYKDLASYNN 253
Query: 198 MIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQ 257
MI V+ + + I L+ M+ + N + SVL C+ L +L G+++H ++
Sbjct: 254 MIAVFAKYDDGSKAISLYIEMEGRNLEPNLWTFTSVLDACSKLGALTEGKEIHKKVKGGD 313
Query: 258 FDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFH 317
DV + L+ MY KCG + + +F++ K++ W S++S Y+Q G + L+ +
Sbjct: 314 QPTDVAYNTALVNMYAKCGSTHEARAVFNDCGLKNVFTWTSLMSAYSQPGQSQYRLEAYQ 373
Query: 318 EMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRA 377
M GV+PDDVT + +ACS++G EG F +M+ + + P HY CM+DLLGR
Sbjct: 374 RMNCEGVIPDDVTFTAIFNACSHSGLPDEGLLYFRAMREDHWIVPLQPHYTCMIDLLGRV 433
Query: 378 GQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLS 437
G++ +A +L+ MP+ PD + W LL AC+ + L + A K++ +L P ++GPY+L+
Sbjct: 434 GRLREAEELVRTMPYSPDVVTWTILLSACKVYGDLKIGARAYKRITELNPPDSGPYLLMG 493
Query: 438 NIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRML 497
N+YA G++ DVAE++K +++R + KPPG S IE ++++H F D +HP + I L
Sbjct: 494 NMYAKAGKWADVAEVKKMIKQRGLAKPPGKSMIEAQRRIHEFVCGD-TAHPLNQEIRARL 552
Query: 498 EKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNL 557
+++ L AGY PD+ VL DV+EE K L +HSE++A+ GL+ G + ++KNL
Sbjct: 553 QEVHEQLSHAGYEPDTKEVLVDVNEEVKPELLLFHSERMALGLGLLTSDAGATLHIVKNL 612
Query: 558 RVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
R+C DCHS KL+SK++ R++++RD++RFH F+ G CSC DYW
Sbjct: 613 RICPDCHSFFKLVSKMLHRKVLVRDSHRFHIFQRGSCSCGDYW 655
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 89/365 (24%), Positives = 171/365 (46%), Gaps = 22/365 (6%)
Query: 52 RIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVN 111
RI DA ++ EK+ +V Y + +D+ F E+ +KN S+ M+ Y
Sbjct: 5 RIIDA----NLEQEKETFLGNCLVRAYGRCKSIDDAVAAFSEIAEKNEYSYAIMMGAYQE 60
Query: 112 NNRIDVARKLFEVMP----EKNEVSWTAMLMGYTQCGR--IQDAWELFKAMPMKS----V 161
N+ A +LF+ ++N+ ++ +L G ++D E+ + + +
Sbjct: 61 NDLHKKALQLFKKSINEELQQNQATYVTVLKSCAHLGEDYLEDGKEIHRHAIAQGFGTDL 120
Query: 162 VASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKE 221
V NS+I + G + A VF++M K+ +++ MI+ Y +E +L+ M E
Sbjct: 121 VVQNSLIHMYAKCGSFKFAAGVFEKMEPKNLISYTSMIQAYTHTAKHVEAYELYKKMLSE 180
Query: 222 GVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKG 281
G+ + + + L+VC ++ G +H +L + V ++ L+ MY + G +
Sbjct: 181 GIMPDIYAYAAALAVCPTIRE---GEAIHVKLGNHERRTPV-CSNALVGMYGRFGRIASA 236
Query: 282 KLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYT 341
K +FD KD+ +N++I+ +A+Y G K++ ++ EM + P+ T VL ACS
Sbjct: 237 KWVFDGIRYKDLASYNNMIAVFAKYDDGSKAISLYIEMEGRNLEPNLWTFTSVLDACSKL 296
Query: 342 GKVKEGREIFESMKSKYLVEPKTEHY-ACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWG 400
G + EG+EI + +K +P Y +V++ + G +A + + + W
Sbjct: 297 GALTEGKEIHKKVKGG--DQPTDVAYNTALVNMYAKCGSTHEARAVFNDCGLK-NVFTWT 353
Query: 401 SLLGA 405
SL+ A
Sbjct: 354 SLMSA 358
>gi|449482345|ref|XP_004156253.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Cucumis sativus]
Length = 614
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 200/542 (36%), Positives = 318/542 (58%), Gaps = 17/542 (3%)
Query: 71 QTNMVLGYCQDGRVDEGREIFDE--MPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEK 128
QT ++ YC+ VD R++F+E +K + + ++SGYV+N++ A LF M E+
Sbjct: 78 QTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSDAVLLFRQMNEE 137
Query: 129 NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKS--------VVASNSMILGLGQNGEVQKA 180
+ L+G EL ++ + V N I + G V A
Sbjct: 138 GVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFITMYMKCGSVNYA 197
Query: 181 RVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASL 240
+ +FD+M K +W+ M+ Y + G V++L+ M GV + +L+ VLS CA+L
Sbjct: 198 QKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVTLVGVLSSCANL 257
Query: 241 ASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSII 300
+ G +V ++ F + ++ + LI MY +CG L K + +FD + +V W +II
Sbjct: 258 GAQSVGHEVEFKMQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGMPERTLVSWTAII 317
Query: 301 SGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLV 360
GY +G GE ++++F EM SG+ PD V VLSACS+ G +G E F+ MK Y +
Sbjct: 318 GGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGLEYFKMMKRNYQL 377
Query: 361 EPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAK 420
EP EHY+CMVDLLGRAG++++A LIE+MP +PD +WG+LLGAC+ H ++LAE+A +
Sbjct: 378 EPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGACKIHKNVELAELAFE 437
Query: 421 KLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFT 480
++++LEP+N G Y+LLSNIY++ V +R M+++ + K PGCS++E++ +VH F
Sbjct: 438 RVIELEPENIGYYVLLSNIYSNANNSKGVLRIRIMMKEKKLKKDPGCSYVELKGRVHPFI 497
Query: 481 GRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLR--YHSEKLAV 538
D +H + I R+LE++ ++ + P+ + +E K R HSEKLAV
Sbjct: 498 VGD-RNHLQSDEIYRVLEELEAIIMQEFGKPEKD----NREESNKDGFTRVGVHSEKLAV 552
Query: 539 AYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRD 598
A+GL+ G + ++KNLR+C DCH K++SK++ R++ +RDA RFHHF++G CSC+D
Sbjct: 553 AFGLLNTTTGAEVVIIKNLRICEDCHLFFKMVSKIVHRQLTVRDATRFHHFRNGSCSCKD 612
Query: 599 YW 600
YW
Sbjct: 613 YW 614
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 135/317 (42%), Gaps = 26/317 (8%)
Query: 6 VVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFI------------RDSRI 53
V + A+V GYV ++A LF QM E+ V +V L G I
Sbjct: 108 TVCYNALVSGYVSNSKCSDAVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHC 167
Query: 54 DDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN- 112
+ FD DV + Y + G V+ +++FDEMP K +ISW M+SGY N
Sbjct: 168 STLKYGFD----SDVSVVNCFITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNG 223
Query: 113 ---NRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVA----SN 165
N +++ R + + V+ +L G E+ M + +N
Sbjct: 224 LATNVLELYRNMDMNGVHPDPVTLVGVLSSCANLGAQSVGHEVEFKMQASGFTSNPFLNN 283
Query: 166 SMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRV 225
++I + G + KA+ VFD M E+ +W+ +I Y G+ + LF M + G+
Sbjct: 284 ALINMYARCGNLTKAQAVFDGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEP 343
Query: 226 NFPSLISVLSVCASLASLDHGRQVHAQLVR-CQFDVDVYVASVLITMYIKCGELVKGKLI 284
+ + + VLS C+ D G + + R Q + S ++ + + G L + + +
Sbjct: 344 DGTAFVCVLSACSHAGLTDQGLEYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTL 403
Query: 285 FDNFASK-DIVMWNSII 300
++ K D +W +++
Sbjct: 404 IESMPIKPDGAVWGALL 420
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 103/212 (48%), Gaps = 6/212 (2%)
Query: 195 WSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLV 254
W+ ++ ++ L+ + L+ M + G R N + L CA+L+ G Q H Q+
Sbjct: 8 WNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQIT 67
Query: 255 RCQFDVDVYVASVLITMYIKCGELVKG--KLIFDNFASKDI-VMWNSIISGYAQYGLGEK 311
+ + +V + LI+MY K G LV K+ +NF S+ + V +N+++SGY
Sbjct: 68 KVGCVFEPFVQTGLISMYCK-GSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSD 126
Query: 312 SLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMV 371
++ +F +M GV + VTL+G++ AC ++ G + S KY + C +
Sbjct: 127 AVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTL-KYGFDSDVSVVNCFI 185
Query: 372 DLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
+ + G V A KL + MP + I W +++
Sbjct: 186 TMYMKCGSVNYAQKLFDEMPVK-GLISWNAMV 216
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 111/251 (44%), Gaps = 19/251 (7%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRL- 59
MP + ++SW AMV GY + G+ T L+ M V V L G + A+ +
Sbjct: 204 MPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVTLVGVLSSCANLGAQSVG 263
Query: 60 ----FDMMPE---KDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
F M + ++ Y + G + + + +FD MP++ ++SWT +I GY +
Sbjct: 264 HEVEFKMQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGMPERTLVSWTAIIGGYGMH 323
Query: 113 NRIDVARKLFEVM----PEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVAS---- 164
++A +LF+ M E + ++ +L + G E FK M +
Sbjct: 324 GHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGLEYFKMMKRNYQLEPGPEH 383
Query: 165 -NSMILGLGQNGEVQKARVVFDQMREK-DDATWSGMIKVYE-RKGYELEVIDLFTLMQKE 221
+ M+ LG+ G +++A+ + + M K D A W ++ + K EL + +++ E
Sbjct: 384 YSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGACKIHKNVELAELAFERVIELE 443
Query: 222 GVRVNFPSLIS 232
+ + L+S
Sbjct: 444 PENIGYYVLLS 454
>gi|297792601|ref|XP_002864185.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297310020|gb|EFH40444.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 588
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 203/542 (37%), Positives = 317/542 (58%), Gaps = 20/542 (3%)
Query: 72 TNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNN----RIDVARKLF--EVM 125
N++ Y + + R F++ P+K+ +W+++IS + N ++ RK+ +
Sbjct: 54 NNLINFYSKSQLPFDSRRAFEDSPQKSATTWSSIISCFAQNELPWMSLEFLRKMMAGSLR 113
Query: 126 PEKNEVSWTAMLMGYTQCGRIQ--DAWELFKAMPMKS-----VVASNSMILGLGQNGEVQ 178
P+ + + CG + D + + MK+ V +S++ + GE+
Sbjct: 114 PDDH-----VLPSATKSCGILSRCDIGKSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIV 168
Query: 179 KARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCA 238
AR +FD+M ++ TWSGM+ Y + G E + LF E + VN S +V+SVCA
Sbjct: 169 YARKMFDEMPLRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSTVISVCA 228
Query: 239 SLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNS 298
+ L+ GRQ+ ++ FD +V S L+++Y KCG+L +FD +++ +WN+
Sbjct: 229 NSTLLELGRQIQGLCIKSSFDSSSFVGSSLVSLYSKCGDLEGAYQVFDEVPMRNLGIWNA 288
Query: 299 IISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKY 358
++ AQ+ +K +++F M SG+ P+ +T + VL+ACS+ G V EG+ F+ MK
Sbjct: 289 MLKACAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGKYYFDLMKESR 348
Query: 359 LVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVA 418
+EP +HYA +VD+LGRAG++E+A++++ MP +P +WG+LL +C H +LA A
Sbjct: 349 -IEPTDKHYASLVDMLGRAGKLEEALEIVTNMPIDPTESVWGALLTSCTIHKNTELAAFA 407
Query: 419 AKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHM 478
A K+ +L P ++G +I LSN YA+ GRF D A+ RK +R R K G SW+E KVH
Sbjct: 408 ADKVFELGPVSSGMHISLSNAYAADGRFEDAAKARKLLRDRGEKKETGLSWVEERNKVHT 467
Query: 479 FTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAV 538
F + H I L ++G + +AGY D+S+VL +VD +EK ++RYHSE+LA+
Sbjct: 468 FAAGE-RRHERSKEIYEKLAELGEEMEKAGYVADTSYVLREVDGDEKNQTIRYHSERLAI 526
Query: 539 AYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRD 598
A+GL+ P PIRVMKNLRVCGDCH+AIK +S R II+RD NRFH F+DG CSC D
Sbjct: 527 AFGLITFPADRPIRVMKNLRVCGDCHNAIKFMSICTRRVIIVRDNNRFHRFEDGKCSCND 586
Query: 599 YW 600
YW
Sbjct: 587 YW 588
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 143/304 (47%), Gaps = 20/304 (6%)
Query: 2 PERNVVSWTAMVRGYVEEGMITEAGTLFWQM------PEKNVVSWTVMLGGFIRDSRIDD 55
P+++ +W++++ + + + + +M P+ +V+ G + I
Sbjct: 77 PQKSATTWSSIISCFAQNELPWMSLEFLRKMMAGSLRPDDHVLPSATKSCGILSRCDIGK 136
Query: 56 ARRLFDMMP--EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNN 113
+ M + DV +++V Y + G + R++FDEMP +NV++W+ M+ GY
Sbjct: 137 SVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPLRNVVTWSGMMYGYAQMG 196
Query: 114 RIDVARKLF-EVMPEK---NEVSWTAML-----MGYTQCGRIQDAWELFKAMPMKSVVAS 164
+ A LF E + E N+ S++ ++ + GR + + S V S
Sbjct: 197 ENEEALWLFKEALFENLAVNDYSFSTVISVCANSTLLELGRQIQGLCIKSSFDSSSFVGS 256
Query: 165 NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVR 224
S++ + G+++ A VFD++ ++ W+ M+K + + +VI+LF M+ G++
Sbjct: 257 -SLVSLYSKCGDLEGAYQVFDEVPMRNLGIWNAMLKACAQHSHTQKVIELFKRMKLSGMK 315
Query: 225 VNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFD-VDVYVASVLITMYIKCGELVKGKL 283
NF + ++VL+ C+ +D G+ + + + D + AS L+ M + G+L +
Sbjct: 316 PNFITFLNVLNACSHAGLVDEGKYYFDLMKESRIEPTDKHYAS-LVDMLGRAGKLEEALE 374
Query: 284 IFDN 287
I N
Sbjct: 375 IVTN 378
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 81/179 (45%), Gaps = 4/179 (2%)
Query: 226 NFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIF 285
N+ + +L A S+ G Q+H +V+ + VA+ LI Y K + F
Sbjct: 14 NYNQICDLLLSSARSRSIVKGLQLHGYIVKSGLSLIPLVANNLINFYSKSQLPFDSRRAF 73
Query: 286 DNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVK 345
++ K W+SIIS +AQ L SL+ +M + + PDD L +C +
Sbjct: 74 EDSPQKSATTWSSIISCFAQNELPWMSLEFLRKMMAGSLRPDDHVLPSATKSCGILSRCD 133
Query: 346 EGREIF-ESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
G+ + SMK+ Y + + +VD+ + G++ A K+ + MP + + W ++
Sbjct: 134 IGKSVHCLSMKTGYDADVFVG--SSLVDMYAKCGEIVYARKMFDEMPLR-NVVTWSGMM 189
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 95/231 (41%), Gaps = 41/231 (17%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MP RNVV+W+ M+ GY + G EA LF + LF
Sbjct: 177 MPLRNVVTWSGMMYGYAQMGENEEALWLFKEA--------------------------LF 210
Query: 61 DMMPEKDVVAQTNMVLGYCQDGRVDE-GREIFDEMPKKNVIS----WTTMISGYVNNNRI 115
+ + D T V+ C + + E GR+I K + S ++++S Y +
Sbjct: 211 ENLAVNDYSFST--VISVCANSTLLELGRQIQGLCIKSSFDSSSFVGSSLVSLYSKCGDL 268
Query: 116 DVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGL---- 171
+ A ++F+ +P +N W AML Q Q ELFK M + + + L +
Sbjct: 269 EGAYQVFDEVPMRNLGIWNAMLKACAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNAC 328
Query: 172 GQNGEVQKARVVFDQMREK----DDATWSGMIKVYERKGYELEVIDLFTLM 218
G V + + FD M+E D ++ ++ + R G E +++ T M
Sbjct: 329 SHAGLVDEGKYYFDLMKESRIEPTDKHYASLVDMLGRAGKLEEALEIVTNM 379
>gi|297836116|ref|XP_002885940.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331780|gb|EFH62199.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 944
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 206/597 (34%), Positives = 339/597 (56%), Gaps = 26/597 (4%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIR------DSRIDDA 56
+++ V++ ++ GY ++G+ TEA LF +M + G ++ D +
Sbjct: 206 DKDSVTFNTLITGYEKDGLYTEAIHLFLKMRQSGHKPSDFTFSGVLKAVVGLHDFALGQQ 265
Query: 57 RRLFDMMP--EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNR 114
+ +D ++ Y + RV E R +F+EMP+ + +S+ +IS Y +
Sbjct: 266 LHGLSVTTGFSRDASVGNQILHFYSKHDRVLETRNLFNEMPELDFVSYNVVISSYSQAEQ 325
Query: 115 IDVARKLFEVMP----EKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILG 170
+ + LF M ++ + ML +Q + + + +++VA+ IL
Sbjct: 326 YEESLNLFREMQCMGFDRRNFPFATMLSIAANLSSLQ----VGRQVHCQAIVATADSILH 381
Query: 171 LGQN--------GEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEG 222
+G + +A ++F + ++ +W+ +I Y +KG + LFT M+
Sbjct: 382 VGNSLVDMYAKCEMFDEAELIFKSLSQRSTVSWTALISGYVQKGLHGAGLKLFTKMRGAN 441
Query: 223 VRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGK 282
+R + + +VL A ASL G+Q+HA ++R +V+ S L+ MY KCG +
Sbjct: 442 LRADQSTFATVLKASAGFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAV 501
Query: 283 LIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTG 342
+F+ ++ V WN++IS YA G GE ++ F +M SG+ PD V+++GVL ACS+ G
Sbjct: 502 QVFEEMPDRNAVSWNALISAYADNGDGEAAIGAFTKMIQSGLQPDSVSILGVLIACSHCG 561
Query: 343 KVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSL 402
V++G E F++M Y + PK +HYACM+DLLGR G+ +A KL++ MPFEPD I+W S+
Sbjct: 562 FVEQGTEFFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSV 621
Query: 403 LGACRTHMKLDLAEVAAKKLLQLEP-KNAGPYILLSNIYASQGRFHDVAELRKNMRKRNV 461
L ACR + LAE AA++L +E ++A Y+ +SNIYA+ G++ +V ++K MR+R +
Sbjct: 622 LNACRIYKNQSLAERAAEQLFSMEKLRDAAAYVSMSNIYAAAGKWENVRHVKKAMRERGI 681
Query: 462 IKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVD 521
K P SW+EV K+H+F+ D +HP I++ + ++ + GY PD+S V+ D+D
Sbjct: 682 KKVPAYSWVEVNHKIHVFSSND-QTHPNGDEIVKKINELTTEIEREGYKPDTSSVVQDID 740
Query: 522 EEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREI 578
E+ K+ SL+YHSE+LAVA+ L+ PEG PI VMKNLR C DCH+AIKLISK++ R I
Sbjct: 741 EQMKIESLKYHSERLAVAFALISTPEGCPIVVMKNLRACRDCHAAIKLISKIVKRVI 797
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 133/480 (27%), Positives = 228/480 (47%), Gaps = 57/480 (11%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MP +N VS M+ GYV+ G ++ A LF MP++ VV+WT+++G + ++ D+A +LF
Sbjct: 70 MPHKNTVSTNTMISGYVKMGDLSSARHLFDAMPDRTVVTWTILMGWYAGNNHFDEAFKLF 129
Query: 61 DMMPEK----DVVAQTNMVLGYCQD-------GRVDEGREIFDEMPKKNVISWTTMISGY 109
M D V T ++ G C D G+V + ++ Y
Sbjct: 130 RQMCRSCTLPDYVTFTTLLPG-CNDAVPQNAVGQVHAFAVKLGFDTNLFLTVCNVLLKSY 188
Query: 110 VNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMP------------ 157
R+D+A LFE + +K+ V++ ++ GY + G +A LF M
Sbjct: 189 CEVRRLDLACVLFEEILDKDSVTFNTLITGYEKDGLYTEAIHLFLKMRQSGHKPSDFTFS 248
Query: 158 --MKSVVASNSMILGLGQNG-------------------------EVQKARVVFDQMREK 190
+K+VV + LG +G V + R +F++M E
Sbjct: 249 GVLKAVVGLHDFALGQQLHGLSVTTGFSRDASVGNQILHFYSKHDRVLETRNLFNEMPEL 308
Query: 191 DDATWSGMIKVYERKGYELEVIDLFTLMQKEGV-RVNFPSLISVLSVCASLASLDHGRQV 249
D +++ +I Y + E ++LF MQ G R NFP ++LS+ A+L+SL GRQV
Sbjct: 309 DFVSYNVVISSYSQAEQYEESLNLFREMQCMGFDRRNFP-FATMLSIAANLSSLQVGRQV 367
Query: 250 HAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLG 309
H Q + D ++V + L+ MY KC + +LIF + + + V W ++ISGY Q GL
Sbjct: 368 HCQAIVATADSILHVGNSLVDMYAKCEMFDEAELIFKSLSQRSTVSWTALISGYVQKGLH 427
Query: 310 EKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYAC 369
LK+F +M + + D T VL A + + G+++ + +E +
Sbjct: 428 GAGLKLFTKMRGANLRADQSTFATVLKASAGFASLLLGKQLHAFIIRSGNLE-NVFSGSG 486
Query: 370 MVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQ--LEP 427
+VD+ + G ++DA+++ E MP + +A+ W +L+ A + + A A K++Q L+P
Sbjct: 487 LVDMYAKCGSIKDAVQVFEEMP-DRNAVSWNALISAYADNGDGEAAIGAFTKMIQSGLQP 545
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 152/315 (48%), Gaps = 12/315 (3%)
Query: 47 FIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMI 106
+R ++ A +++D MP K+ V+ M+ GY + G + R +FD MP + V++WT ++
Sbjct: 54 LLRRGQVSAALKVYDEMPHKNTVSTNTMISGYVKMGDLSSARHLFDAMPDRTVVTWTILM 113
Query: 107 SGYVNNNRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVV 162
Y NN D A KLF M + V++T +L G Q+A A +K
Sbjct: 114 GWYAGNNHFDEAFKLFRQMCRSCTLPDYVTFTTLLPGCND-AVPQNAVGQVHAFAVKLGF 172
Query: 163 ASNSMI----LGLGQNGEVQK---ARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLF 215
+N + + L EV++ A V+F+++ +KD T++ +I YE+ G E I LF
Sbjct: 173 DTNLFLTVCNVLLKSYCEVRRLDLACVLFEEILDKDSVTFNTLITGYEKDGLYTEAIHLF 232
Query: 216 TLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKC 275
M++ G + + + VL L G+Q+H V F D V + ++ Y K
Sbjct: 233 LKMRQSGHKPSDFTFSGVLKAVVGLHDFALGQQLHGLSVTTGFSRDASVGNQILHFYSKH 292
Query: 276 GELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVL 335
+++ + +F+ D V +N +IS Y+Q E+SL +F EM G + +L
Sbjct: 293 DRVLETRNLFNEMPELDFVSYNVVISSYSQAEQYEESLNLFREMQCMGFDRRNFPFATML 352
Query: 336 SACSYTGKVKEGREI 350
S + ++ GR++
Sbjct: 353 SIAANLSSLQVGRQV 367
>gi|296089078|emb|CBI38781.3| unnamed protein product [Vitis vinifera]
Length = 589
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 198/538 (36%), Positives = 316/538 (58%), Gaps = 14/538 (2%)
Query: 76 LGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEK----NEV 131
L G ++ R++F +M + TMI GY + A L+ M E+ +
Sbjct: 53 LALSHSGDLNYARKLFTQMQNPDPFICNTMIRGYARSQNPYEAVSLYYFMVERGVPVDNY 112
Query: 132 SWTAMLMGYTQCGRIQDA----WELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQM 187
++ +L + G ++ E+ K + N++I G A VFD+
Sbjct: 113 TYPFVLAACARLGAVKLGRRFHCEVLKNGFGSDLFVINALIQFYHNCGSFGCACDVFDES 172
Query: 188 REKDDATWSGMIKVYERKGYELEVIDLFTLMQK-EGVRVNFPSLISVLSVCASLASLDHG 246
+D TW+ MI + KG + DL M K + +R + +++S++ CA L +L+ G
Sbjct: 173 TVRDVVTWNIMINAHLNKGLSEKAFDLLDEMTKLDNLRPDEVTMVSLVPACAQLGNLERG 232
Query: 247 RQVHA---QLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGY 303
+ +H+ +L + + + D+ + + L+ MY KCG + +F +++ WN++I G
Sbjct: 233 KFLHSYSKELDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFTWNALIGGL 292
Query: 304 AQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPK 363
A +G GE ++ +F +M +MPDDVT + +L ACS+ G V EG +F++MK+K+ +EP+
Sbjct: 293 AMHGHGEDAISLFDQMEHDKLMPDDVTFIALLCACSHAGLVDEGLAMFQAMKNKFQIEPR 352
Query: 364 TEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLL 423
EHY C+VDLL RA +V+DA+ IE MP + ++++W +LLGACR+ DLAE ++++
Sbjct: 353 MEHYGCVVDLLCRARKVDDALAFIENMPIKANSVLWATLLGACRSGGHFDLAEKIGRRVI 412
Query: 424 QLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRD 483
+LEP + G Y++LSN+YA ++ +LRK M+ + + K PGCSWIE+ +H F D
Sbjct: 413 ELEPDSCGRYVMLSNLYAGVSQWDHALKLRKQMKNKGIEKTPGCSWIELNGMIHQFVAGD 472
Query: 484 CVSHPEHPMIMRMLEKIGGLLR-EAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGL 542
SH + I M+E++ + + G+ P ++ VL D++EEEK HSL HSEKLA+A GL
Sbjct: 473 -RSHLQTEQIYAMIEEMTRRVNLDGGHVPGTANVLFDIEEEEKEHSLFLHSEKLAIALGL 531
Query: 543 VKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
+ P G PIR++KNLRVC DCHS +K+ SKV REI+ RD +RFHHFK+G CSC D+W
Sbjct: 532 ISTPSGSPIRIVKNLRVCNDCHSFLKVTSKVYNREIVARDRSRFHHFKEGSCSCMDFW 589
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/257 (21%), Positives = 111/257 (43%), Gaps = 20/257 (7%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNV----VSWTVMLGGFIRDSRIDDARRLFDMMPE 65
M+RGY EA +L++ M E+ V ++ +L R + RR + +
Sbjct: 80 NTMIRGYARSQNPYEAVSLYYFMVERGVPVDNYTYPFVLAACARLGAVKLGRRFHCEVLK 139
Query: 66 K----DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKL 121
D+ ++ Y G ++FDE ++V++W MI+ ++N + A L
Sbjct: 140 NGFGSDLFVINALIQFYHNCGSFGCACDVFDESTVRDVVTWNIMINAHLNKGLSEKAFDL 199
Query: 122 FEVMPE-----KNEVSWTAMLMGYTQCGRIQD-------AWELFKAMPMKSVVASNSMIL 169
+ M + +EV+ +++ Q G ++ + EL K +V +++
Sbjct: 200 LDEMTKLDNLRPDEVTMVSLVPACAQLGNLERGKFLHSYSKELDKFEINCDLVLETALVD 259
Query: 170 GLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPS 229
+ G + A VF +MR ++ TW+ +I G+ + I LF M+ + + + +
Sbjct: 260 MYAKCGSIDLALQVFRRMRVRNVFTWNALIGGLAMHGHGEDAISLFDQMEHDKLMPDDVT 319
Query: 230 LISVLSVCASLASLDHG 246
I++L C+ +D G
Sbjct: 320 FIALLCACSHAGLVDEG 336
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 66/150 (44%), Gaps = 11/150 (7%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMP 64
++V TA+V Y + G I A +F +M +NV +W ++GG +DA LFD M
Sbjct: 250 DLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFTWNALIGGLAMHGHGEDAISLFDQME 309
Query: 65 EK----DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVIS-----WTTMISGYVNNNRI 115
D V ++ G VDEG +F M K I + ++ ++
Sbjct: 310 HDKLMPDDVTFIALLCACSHAGLVDEGLAMFQAMKNKFQIEPRMEHYGCVVDLLCRARKV 369
Query: 116 DVARKLFEVMPEK-NEVSWTAMLMGYTQCG 144
D A E MP K N V W A L+G + G
Sbjct: 370 DDALAFIENMPIKANSVLW-ATLLGACRSG 398
Score = 45.1 bits (105), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 60/141 (42%), Gaps = 14/141 (9%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV----VSWTVMLGGFIRDSRIDDA 56
M RNV +W A++ G G +A +LF QM + V++ +L +D+
Sbjct: 277 MRVRNVFTWNALIGGLAMHGHGEDAISLFDQMEHDKLMPDDVTFIALLCACSHAGLVDEG 336
Query: 57 RRLFDMMPEKDVVAQTNMVLG-----YCQDGRVDEGREIFDEMP-KKNVISWTTMISGYV 110
+F M K + G C+ +VD+ + MP K N + W T++
Sbjct: 337 LAMFQAMKNKFQIEPRMEHYGCVVDLLCRARKVDDALAFIENMPIKANSVLWATLLGACR 396
Query: 111 NNNRIDVA----RKLFEVMPE 127
+ D+A R++ E+ P+
Sbjct: 397 SGGHFDLAEKIGRRVIELEPD 417
>gi|356522333|ref|XP_003529801.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Glycine max]
Length = 650
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 214/613 (34%), Positives = 341/613 (55%), Gaps = 42/613 (6%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV----VSWTVMLGGFIRDSRIDDA 56
+P ++ W M++GY + +++ M N+ ++ L GF RD +
Sbjct: 67 IPHPSMFIWNTMIKGYSKISHPENGVSMYLLMLTSNIKPDRFTFPFSLKGFTRDMALQHG 126
Query: 57 RRLFDMMP----EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+ L + + ++ Q + + G VD ++FD V++W M+SGY
Sbjct: 127 KELLNHAVKHGFDSNLFVQKAFIHMFSLCGIVDLAHKVFDMGDACEVVTWNIMLSGY--- 183
Query: 113 NRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQD-AW--ELFKAMPMKSVVASNSMIL 169
NR+ K F++ + ML+ + C +++D W +FK + N I+
Sbjct: 184 NRV----KQFKI---------SKMLLVLSACSKLKDLEWGKHIFKYI--------NGGIV 222
Query: 170 G--LGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNF 227
GE+ +A+ VFD M+ +D +W+ MI Y R + + + LF MQ V+ +
Sbjct: 223 EHMFAACGEMDEAQGVFDNMKTRDVVSWTAMIDGYLRMNHFIGALALFREMQMSNVKPDE 282
Query: 228 PSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDN 287
+++S+L CA L +L+ G V + + D +V + L+ MY KCG + K K +F
Sbjct: 283 FTMVSILIACALLGALELGEWVKTCIDKNSNKNDSFVGNALVDMYFKCGNVRKAKKVFKE 342
Query: 288 FASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEG 347
KD W ++I G A G GE++L +F M + V PD++T +GVL AC V +G
Sbjct: 343 MYQKDKFTWTTMIVGLAINGHGEEALAMFSNMIEASVTPDEITYIGVLCAC----MVDKG 398
Query: 348 REIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACR 407
+ F +M ++ ++P HY CMVDLLG G +E+A+++I MP +P++I+WGS LGACR
Sbjct: 399 KSFFTNMTMQHGIKPTVTHYGCMVDLLGCVGCLEEALEVIVNMPVKPNSIVWGSPLGACR 458
Query: 408 THMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGC 467
H + LA++AAK++L+LEP+N Y+LL NIYA+ ++ ++ ++RK M +R + K PGC
Sbjct: 459 VHKNVQLADMAAKQILELEPENGAVYVLLCNIYAASKKWENLCQVRKLMMERGIKKTPGC 518
Query: 468 SWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVH 527
S +E+ V+ F D SHP+ I LE + L +AGY PD+S V D+ EE+K
Sbjct: 519 SLMELNGNVYEFVAGD-QSHPQSKEIYAKLENMMQGLIKAGYSPDTSEVFLDLGEEDKET 577
Query: 528 SLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFH 587
+L HSEKLA+AY L+ GV IR++KNLR+C DCH KL+S+ RE+I++D RFH
Sbjct: 578 ALYRHSEKLAIAYALISSGPGVTIRIVKNLRMCVDCHHMAKLVSQAYNRELIVKDKTRFH 637
Query: 588 HFKDGLCSCRDYW 600
HF+ G CSC ++W
Sbjct: 638 HFRHGSCSCNNFW 650
>gi|296087881|emb|CBI35164.3| unnamed protein product [Vitis vinifera]
Length = 663
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 220/572 (38%), Positives = 326/572 (56%), Gaps = 66/572 (11%)
Query: 40 WTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNM---VLGYC-QDGRVDEGREIFDEMP 95
W ++ + + ++ +A ++ + + D M VL C Q G+EI +
Sbjct: 127 WNFVITSYTKRNQPRNALNVYAQLRKMDFEVDNFMAPSVLKACGQVSWTQLGKEIHGFVL 186
Query: 96 KK----NVISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSW----TAMLMGYTQCGRIQ 147
KK +V ++ Y ++ AR +F+ M E++ VSW TA+L Y +CG
Sbjct: 187 KKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWIPTTTALLDMYAKCGH-- 244
Query: 148 DAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGY 207
LGL AR +F+ + +K +W+ MI R
Sbjct: 245 ---------------------LGL--------ARQLFNGLTQKTVVSWTAMIAGCIRSNR 275
Query: 208 ELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASV 267
E LF MQ+E + FP+ I++L+ + + +VD + +
Sbjct: 276 LEEGTKLFIRMQEENI---FPNEITMLN-------------------KERVEVDCILNTA 313
Query: 268 LITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPD 327
L+ MY KCG++ +F S+DI MWN+II+G+A +G GE++L +F EM GV P+
Sbjct: 314 LVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPN 373
Query: 328 DVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLI 387
D+T +G+L ACS+ G V EG+++FE M + + P+ EHY CMVDLLGRAG +++A ++I
Sbjct: 374 DITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMI 433
Query: 388 EAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFH 447
++MP +P+ I+WG+L+ ACR H L E+AA +LL++EP+N G +L+SNIYA+ R+
Sbjct: 434 KSMPIKPNTIVWGALVAACRLHKNPQLGELAATQLLEIEPENCGYNVLMSNIYAAANRWS 493
Query: 448 DVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREA 507
D A +RK M+ + K PG S IEV VH F D SHP+ I ML ++ L EA
Sbjct: 494 DAAGVRKTMKTVGMKKEPGHSVIEVNGTVHEFLMGD-QSHPQIRRINEMLAEMRRKLNEA 552
Query: 508 GYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAI 567
GY PD+S VL ++DEEEK +L YHSEKLA+A+GL+ PIR++KNLRVC DCH+A
Sbjct: 553 GYVPDTSTVLLNIDEEEKETALTYHSEKLAMAFGLISTAPSTPIRIVKNLRVCNDCHAAT 612
Query: 568 KLISKVMGREIILRDANRFHHFKDGLCSCRDY 599
KL+SK+ GR II+RD NRFHHF++G CSC DY
Sbjct: 613 KLLSKIYGRVIIVRDRNRFHHFREGYCSCGDY 644
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 121/270 (44%), Gaps = 60/270 (22%)
Query: 7 VSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEK 66
VSWT + G G + + G +++V ++ + + ++ AR +FD M E+
Sbjct: 172 VSWTQL--GKEIHGFVLKKGL------DRDVFVGNALMLMYGECACVEYARLVFDKMMER 223
Query: 67 DVVA----QTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLF 122
DVV+ T ++ Y + G + R++F+ + +K V+SWT MI+G + +NR++ KLF
Sbjct: 224 DVVSWIPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEGTKLF 283
Query: 123 EVMPEK----NEVSW-------------TAMLMGYTQCGRIQDAWELFKAMPMKSVVASN 165
M E+ NE++ TA++ Y +CG I A LF + + N
Sbjct: 284 IRMQEENIFPNEITMLNKERVEVDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWN 343
Query: 166 SMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRV 225
++I G +G Y E +D+F M+++GV+
Sbjct: 344 AIITGFAMHG-------------------------------YGEEALDIFAEMERQGVKP 372
Query: 226 NFPSLISVLSVCASLASLDHGRQVHAQLVR 255
N + I +L C+ + G+++ ++V
Sbjct: 373 NDITFIGLLHACSHAGLVTEGKKLFEKMVH 402
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 109/235 (46%), Gaps = 23/235 (9%)
Query: 192 DATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHA 251
A W+ +I Y ++ ++++ ++K V+ SVL C ++ G+++H
Sbjct: 124 SAQWNFVITSYTKRNQPRNALNVYAQLRKMDFEVDNFMAPSVLKACGQVSWTQLGKEIHG 183
Query: 252 QLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMW----NSIISGYAQYG 307
+++ D DV+V + L+ MY +C + +L+FD +D+V W +++ YA+ G
Sbjct: 184 FVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWIPTTTALLDMYAKCG 243
Query: 308 LGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMK------------ 355
L + ++F+ V+ +++ C + +++EG ++F M+
Sbjct: 244 ----HLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEGTKLFIRMQEENIFPNEITML 299
Query: 356 SKYLVEPKTEHYACMVDLLGRAGQVEDAMKL-IEAMPFEPDAIIWGSLLGACRTH 409
+K VE +VD+ + G + A +L IEA+ D +W +++ H
Sbjct: 300 NKERVEVDCILNTALVDMYAKCGDINAAGRLFIEAI--SRDICMWNAIITGFAMH 352
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 84/187 (44%), Gaps = 30/187 (16%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV-----------------VSWTVM 43
+ ++ VVSWTAM+ G + + E LF +M E+N+ + T +
Sbjct: 255 LTQKTVVSWTAMIAGCIRSNRLEEGTKLFIRMQEENIFPNEITMLNKERVEVDCILNTAL 314
Query: 44 LGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNV---- 99
+ + + I+ A RLF +D+ ++ G+ G +E +IF EM ++ V
Sbjct: 315 VDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPND 374
Query: 100 ISWTTMISGYVNNNRIDVARKLFEVM-------PEKNEVSWTAMLMGYTQCGRIQDAWEL 152
I++ ++ + + +KLFE M P+ L+G + G + +A E+
Sbjct: 375 ITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLG--RAGLLDEAHEM 432
Query: 153 FKAMPMK 159
K+MP+K
Sbjct: 433 IKSMPIK 439
>gi|297831842|ref|XP_002883803.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329643|gb|EFH60062.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 697
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 203/591 (34%), Positives = 318/591 (53%), Gaps = 86/591 (14%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF 60
MP+RNV +W ++V G + G + EA +LF MPE++ +W M+ GF + R ++A F
Sbjct: 81 MPQRNVFTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALYYF 140
Query: 61 DMMPEK---------------------------------------DVVAQTNMVLGYCQD 81
MM ++ DV + +V Y +
Sbjct: 141 AMMHKEGFVLNEYTFASGLSACSGLNDMNRGVQIHSLIAKSPCLSDVYIGSALVDMYSKC 200
Query: 82 GRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEK----NEVSWTAML 137
G V++ +++FDEM +NV+SW ++I+ Y N A K+F+VM E +EV+ +++
Sbjct: 201 GNVNDAQQVFDEMGDRNVVSWNSLITCYEQNGPAVEALKVFQVMLESWVEPDEVTLASVI 260
Query: 138 MG------------------------------------YTQCGRIQDAWELFKAMPMKSV 161
Y +C RI++A +F +MP+++V
Sbjct: 261 SACASLSAIKVGQEVHARVVKMDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNV 320
Query: 162 VASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKE 221
+A SM+ G + AR++F +M E++ +W+ +I Y + G E + LF L+++E
Sbjct: 321 IAETSMVSGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRE 380
Query: 222 GVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDV------DVYVASVLITMYIKC 275
V + ++L CA LA L G Q H +++ F D++V + LI MY+KC
Sbjct: 381 SVCPTHYTFANILKACADLADLHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKC 440
Query: 276 GELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVL 335
G + +G L+F +D V WN++I G+AQ G G ++L++F EM SG PD +T++GVL
Sbjct: 441 GCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLDSGEKPDHITMIGVL 500
Query: 336 SACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPD 395
SAC + G V+EGR F SM + V P +HY CMVDLLGRAG +E+A +IE MP +PD
Sbjct: 501 SACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSIIEEMPVQPD 560
Query: 396 AIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKN 455
++IWGSLL AC+ H + L + A+KL ++E N+GPY+LLSN+YA G++ D +RK
Sbjct: 561 SVIWGSLLAACKVHRNITLGKYVAEKLFEVETSNSGPYVLLSNMYAELGKWGDAMNVRKL 620
Query: 456 MRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLRE 506
MRK V K PGCSWI++ H+F +D SHP I +L+ + +R+
Sbjct: 621 MRKEGVTKQPGCSWIKIPGHAHVFMVKD-KSHPRKKQIHSLLDILIAEMRQ 670
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 156/300 (52%), Gaps = 4/300 (1%)
Query: 136 MLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATW 195
++ Y +CG ++D +LF MP ++V NS++ GL + G + +A +F M E+D TW
Sbjct: 61 LIDAYAKCGSLEDGRQLFDKMPQRNVFTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTW 120
Query: 196 SGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVR 255
+ M+ + + E + F +M KEG +N + S LS C+ L ++ G Q+H+ + +
Sbjct: 121 NSMVSGFAQHDRCEEALYYFAMMHKEGFVLNEYTFASGLSACSGLNDMNRGVQIHSLIAK 180
Query: 256 CQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKV 315
DVY+ S L+ MY KCG + + +FD +++V WNS+I+ Y Q G ++LKV
Sbjct: 181 SPCLSDVYIGSALVDMYSKCGNVNDAQQVFDEMGDRNVVSWNSLITCYEQNGPAVEALKV 240
Query: 316 FHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLG 375
F M S V PD+VTL V+SAC+ +K G+E+ + + VD+
Sbjct: 241 FQVMLESWVEPDEVTLASVISACASLSAIKVGQEVHARVVKMDKLRNDIILSNAFVDMYA 300
Query: 376 RAGQVEDAMKLIEAMPFE----PDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAG 431
+ ++++A + ++MP +++ G + A +L ++A + ++ AG
Sbjct: 301 KCSRIKEARFIFDSMPIRNVIAETSMVSGYAMAASTKAARLMFTKMAERNVVSWNALIAG 360
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 99/414 (23%), Positives = 192/414 (46%), Gaps = 77/414 (18%)
Query: 66 KDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVM 125
+V Q ++ Y + G +++GR++FD+MP++NV +W ++++G +D A LF M
Sbjct: 53 NEVFIQNRLIDAYAKCGSLEDGRQLFDKMPQRNVFTWNSVVTGLTKLGFLDEADSLFRSM 112
Query: 126 PEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVAS--------------NSMILGL 171
PE+++ +W +M+ G+ Q R ++A F M + V + N M G+
Sbjct: 113 PERDQCTWNSMVSGFAQHDRCEEALYYFAMMHKEGFVLNEYTFASGLSACSGLNDMNRGV 172
Query: 172 -------------------------GQNGEVQKARVVFDQMREKDDATWSGMIKVYERKG 206
+ G V A+ VFD+M +++ +W+ +I YE+ G
Sbjct: 173 QIHSLIAKSPCLSDVYIGSALVDMYSKCGNVNDAQQVFDEMGDRNVVSWNSLITCYEQNG 232
Query: 207 YELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRC-QFDVDVYVA 265
+E + +F +M + V + +L SV+S CASL+++ G++VHA++V+ + D+ ++
Sbjct: 233 PAVEALKVFQVMLESWVEPDEVTLASVISACASLSAIKVGQEVHARVVKMDKLRNDIILS 292
Query: 266 SVLITMYIKCGELVKGKLIFDN-------------------------------FASKDIV 294
+ + MY KC + + + IFD+ A +++V
Sbjct: 293 NAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMVSGYAMAASTKAARLMFTKMAERNVV 352
Query: 295 MWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREI-FES 353
WN++I+GY Q G E++L +F + V P T +L AC+ + G +
Sbjct: 353 SWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYTFANILKACADLADLHLGMQAHVHV 412
Query: 354 MKSKYLVEPKTEH----YACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
+K + + E ++D+ + G VE+ + M E D + W +++
Sbjct: 413 LKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKM-MERDCVSWNAMI 465
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 84/188 (44%), Gaps = 33/188 (17%)
Query: 247 RQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSI------- 299
R VHA +++ F +V++ + LI Y KCG L G+ +FD +++ WNS+
Sbjct: 40 RCVHASVIKSGFSNEVFIQNRLIDAYAKCGSLEDGRQLFDKMPQRNVFTWNSVVTGLTKL 99
Query: 300 ------------------------ISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVL 335
+SG+AQ+ E++L F M G + ++ T L
Sbjct: 100 GFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALYYFAMMHKEGFVLNEYTFASGL 159
Query: 336 SACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPD 395
SACS + G +I S+ +K + +VD+ + G V DA ++ + M + +
Sbjct: 160 SACSGLNDMNRGVQI-HSLIAKSPCLSDVYIGSALVDMYSKCGNVNDAQQVFDEMG-DRN 217
Query: 396 AIIWGSLL 403
+ W SL+
Sbjct: 218 VVSWNSLI 225
>gi|357449183|ref|XP_003594868.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355483916|gb|AES65119.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 874
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 228/664 (34%), Positives = 346/664 (52%), Gaps = 87/664 (13%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDV- 68
A+V Y + G + EA TLF +K++VSW ++ ++ R ++A +M + V
Sbjct: 225 NALVTMYAKLGRVYEAKTLFDVFDDKDLVSWNTIISSLSQNDRFEEALLYLHVMLQSGVR 284
Query: 69 ----------------------------VAQTN-----------MVLGYCQDGRVDEGRE 89
V N +V YC + ++GR
Sbjct: 285 PNGVTLASVLPACSHLEMLGCGKEIHAFVLMNNDLIENSFVGCALVDMYCNCKQPEKGRL 344
Query: 90 IFDEMPKKNVISWTTMISGYVNNNRIDVARKLF-----EVMPEKNEVSWTAMLMGYTQCG 144
+FD M ++ + W MI+GYV N A +LF E+ N V+ +++L +C
Sbjct: 345 VFDGMFRRTIAVWNAMIAGYVRNEFDYEAIELFVEMVFELGLSPNSVTLSSVLPACVRCE 404
Query: 145 RIQDAWELFKAMPM----KSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIK 200
D + + K N+++ + G ++ AR +F M KD +W+ MI
Sbjct: 405 SFLDKEGIHSCVVKWGFEKDKYVQNALMDMYSRMGRIEIARSIFGSMNRKDIVSWNTMIT 464
Query: 201 VYERKGYELEVIDLFTLMQKEGV------------RVNFP------SLISVLSVCASLAS 242
Y G + ++L MQ+ NFP +L++VL CA+LA+
Sbjct: 465 GYVVCGRHDDALNLLHDMQRGQAEHRINTFDDYEDNKNFPLKPNSVTLMTVLPGCAALAA 524
Query: 243 LDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISG 302
L G+++HA V+ DV V S L+ MY KCG L + +F+ + ++++ WN +I
Sbjct: 525 LGKGKEIHAYAVKQMLSKDVAVGSALVDMYAKCGCLNLSRTVFEQMSVRNVITWNVLIMA 584
Query: 303 YAQYGLGEKSLKVFHEMFSSG-----VMPDDVTLVGVLSACSYTGKVKEGREIFESMKSK 357
Y +G GE++LK+F M G + P++VT + + ++ S++G V EG +F +MK+K
Sbjct: 585 YGMHGKGEEALKLFRRMVEEGDNNREIRPNEVTYIAIFASLSHSGMVDEGLNLFYTMKAK 644
Query: 358 YLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAI-IWGSLLGACRTHMKLDLAE 416
+ +EP ++HYAC+VDLLGR+GQ+E+A LI+ MP + W SLLGAC+ H L++ E
Sbjct: 645 HGIEPTSDHYACLVDLLGRSGQIEEAYNLIKTMPSNMKKVDAWSSLLGACKIHQNLEIGE 704
Query: 417 VAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKV 476
+AAK L L+P Y ++ L + M+++ V K PGCSWIE +V
Sbjct: 705 IAAKNLFVLDPNVLD--------YGTKQSM-----LGRKMKEKGVRKEPGCSWIEHGDEV 751
Query: 477 HMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKL 536
H F D VSHP+ + LE + +++ GY PD+S VLH+V EEEK L HSE+L
Sbjct: 752 HKFLAGD-VSHPQSKEVHEYLETLSLRMKKEGYVPDTSCVLHNVGEEEKETMLCGHSERL 810
Query: 537 AVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSC 596
A+A+GL+ G IRV KNLRVC DCH A K ISK++ REIILRD RFHHF++G CSC
Sbjct: 811 AIAFGLLNTSPGTTIRVAKNLRVCNDCHVATKFISKIVDREIILRDVRRFHHFRNGTCSC 870
Query: 597 RDYW 600
DYW
Sbjct: 871 GDYW 874
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 113/459 (24%), Positives = 202/459 (44%), Gaps = 74/459 (16%)
Query: 72 TNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKN-- 129
++V Y + G +D R +FDE+ ++ +SW +MI+ ++A LF +M +N
Sbjct: 124 NSLVNMYGKCGDIDAARRVFDEITNRDDVSWNSMINAACRFEEWELAVHLFRLMLLENVG 183
Query: 130 EVSWTAMLMGYTQCGRIQDAWELFK---AMPMKS----VVASNSMILGLGQNGEVQKARV 182
S+T + + + C + + L K A +++ +N+++ + G V +A+
Sbjct: 184 PTSFTLVSVAHA-CSNLINGLLLGKQVHAFVLRNGDWRTFTNNALVTMYAKLGRVYEAKT 242
Query: 183 VFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLAS 242
+FD +KD +W+ +I + E + +M + GVR N +L SVL C+ L
Sbjct: 243 LFDVFDDKDLVSWNTIISSLSQNDRFEEALLYLHVMLQSGVRPNGVTLASVLPACSHLEM 302
Query: 243 LDHGRQVHA-QLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIIS 301
L G+++HA L+ + +V L+ MY C + KG+L+FD + I +WN++I+
Sbjct: 303 LGCGKEIHAFVLMNNDLIENSFVGCALVDMYCNCKQPEKGRLVFDGMFRRTIAVWNAMIA 362
Query: 302 GYAQYGLGEKSLKVFHEM-FSSGVMPDDVTLVGVLSAC---------------------- 338
GY + +++++F EM F G+ P+ VTL VL AC
Sbjct: 363 GYVRNEFDYEAIELFVEMVFELGLSPNSVTLSSVLPACVRCESFLDKEGIHSCVVKWGFE 422
Query: 339 -------------SYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMK 385
S G+++ R IF SM K +V T M+ G+ +DA+
Sbjct: 423 KDKYVQNALMDMYSRMGRIEIARSIFGSMNRKDIVSWNT-----MITGYVVCGRHDDALN 477
Query: 386 LIEAM---------------------PFEPDAIIWGSLLGACRTHMKLDLA-EVAAKKLL 423
L+ M P +P+++ ++L C L E+ A +
Sbjct: 478 LLHDMQRGQAEHRINTFDDYEDNKNFPLKPNSVTLMTVLPGCAALAALGKGKEIHAYAVK 537
Query: 424 QLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVI 462
Q+ K+ L ++YA G + + + M RNVI
Sbjct: 538 QMLSKDVAVGSALVDMYAKCGCLNLSRTVFEQMSVRNVI 576
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 91/281 (32%), Positives = 143/281 (50%), Gaps = 12/281 (4%)
Query: 151 ELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYER-KGYEL 209
+FK NS++ G+ G++ AR VFD++ +DD +W+ MI R + +EL
Sbjct: 110 HVFKFGQALPTAVPNSLVNMYGKCGDIDAARRVFDEITNRDDVSWNSMINAACRFEEWEL 169
Query: 210 EVIDLFTLMQKEGVRVNFPSLISVLSVCASLAS-LDHGRQVHAQLVRCQFDVDVYVASVL 268
V LF LM E V +L+SV C++L + L G+QVHA ++R D + + L
Sbjct: 170 AV-HLFRLMLLENVGPTSFTLVSVAHACSNLINGLLLGKQVHAFVLR-NGDWRTFTNNAL 227
Query: 269 ITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDD 328
+TMY K G + + K +FD F KD+V WN+IIS +Q E++L H M SGV P+
Sbjct: 228 VTMYAKLGRVYEAKTLFDVFDDKDLVSWNTIISSLSQNDRFEEALLYLHVMLQSGVRPNG 287
Query: 329 VTLVGVLSACSYTGKVKEGREI--FESMKSKYLVEPKTEHYAC-MVDLLGRAGQVEDAMK 385
VTL VL ACS+ + G+EI F M + + + C +VD+ Q E
Sbjct: 288 VTLASVLPACSHLEMLGCGKEIHAFVLMNNDLI---ENSFVGCALVDMYCNCKQPEKGRL 344
Query: 386 LIEAMPFEPDAIIWGSLL-GACRTHMKLDLAEVAAKKLLQL 425
+ + M F +W +++ G R + E+ + + +L
Sbjct: 345 VFDGM-FRRTIAVWNAMIAGYVRNEFDYEAIELFVEMVFEL 384
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 123/517 (23%), Positives = 212/517 (41%), Gaps = 108/517 (20%)
Query: 53 IDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNV--ISWT------- 103
ID ARR+FD + +D V+ +M+ C+ + +F M +NV S+T
Sbjct: 136 IDAARRVFDEITNRDDVSWNSMINAACRFEEWELAVHLFRLMLLENVGPTSFTLVSVAHA 195
Query: 104 --TMISG-------------------YVNN---------NRIDVARKLFEVMPEKNEVSW 133
+I+G + NN R+ A+ LF+V +K+ VSW
Sbjct: 196 CSNLINGLLLGKQVHAFVLRNGDWRTFTNNALVTMYAKLGRVYEAKTLFDVFDDKDLVSW 255
Query: 134 TAMLMGYTQCGRIQDAWELFKAM----------PMKSVVASNSMILGLGQNGEV------ 177
++ +Q R ++A M + SV+ + S + LG E+
Sbjct: 256 NTIISSLSQNDRFEEALLYLHVMLQSGVRPNGVTLASVLPACSHLEMLGCGKEIHAFVLM 315
Query: 178 ------------------------QKARVVFDQMREKDDATWSGMIKVYERKGYELEVID 213
+K R+VFD M + A W+ MI Y R ++ E I+
Sbjct: 316 NNDLIENSFVGCALVDMYCNCKQPEKGRLVFDGMFRRTIAVWNAMIAGYVRNEFDYEAIE 375
Query: 214 LFTLMQKE-GVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMY 272
LF M E G+ N +L SVL C S +H+ +V+ F+ D YV + L+ MY
Sbjct: 376 LFVEMVFELGLSPNSVTLSSVLPACVRCESFLDKEGIHSCVVKWGFEKDKYVQNALMDMY 435
Query: 273 IKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSG--------- 323
+ G + + IF + KDIV WN++I+GY G + +L + H+M
Sbjct: 436 SRMGRIEIARSIFGSMNRKDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQAEHRINTFD 495
Query: 324 ---------VMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLL 374
+ P+ VTL+ VL C+ + +G+EI + K ++ + +VD+
Sbjct: 496 DYEDNKNFPLKPNSVTLMTVLPGCAALAALGKGKEI-HAYAVKQMLSKDVAVGSALVDMY 554
Query: 375 GRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLL-------QLEP 427
+ G + + + E M + I W L+ A H K + A ++++ ++ P
Sbjct: 555 AKCGCLNLSRTVFEQMSVR-NVITWNVLIMAYGMHGKGEEALKLFRRMVEEGDNNREIRP 613
Query: 428 KNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKP 464
N YI + + G + L M+ ++ I+P
Sbjct: 614 -NEVTYIAIFASLSHSGMVDEGLNLFYTMKAKHGIEP 649
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 120/278 (43%), Gaps = 37/278 (13%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMP-----EKNVVSWTVMLGGFIRDSRIDD 55
M R + W AM+ GYV EA LF +M N V+ + +L +R D
Sbjct: 349 MFRRTIAVWNAMIAGYVRNEFDYEAIELFVEMVFELGLSPNSVTLSSVLPACVRCESFLD 408
Query: 56 ARRLFDMMP----EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVN 111
+ + EKD Q ++ Y + GR++ R IF M +K+++SW TMI+GYV
Sbjct: 409 KEGIHSCVVKWGFEKDKYVQNALMDMYSRMGRIEIARSIFGSMNRKDIVSWNTMITGYVV 468
Query: 112 NNRIDVARKLFEVM---------------------PEK-NEVSWTAMLMGYTQCGRIQDA 149
R D A L M P K N V+ +L G +
Sbjct: 469 CGRHDDALNLLHDMQRGQAEHRINTFDDYEDNKNFPLKPNSVTLMTVLPGCAALAALGKG 528
Query: 150 WEL----FKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERK 205
E+ K M K V ++++ + G + +R VF+QM ++ TW+ +I Y
Sbjct: 529 KEIHAYAVKQMLSKDVAVGSALVDMYAKCGCLNLSRTVFEQMSVRNVITWNVLIMAYGMH 588
Query: 206 GYELEVIDLFTLMQKEG--VRVNFPSLISVLSVCASLA 241
G E + LF M +EG R P+ ++ +++ ASL+
Sbjct: 589 GKGEEALKLFRRMVEEGDNNREIRPNEVTYIAIFASLS 626
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 105/241 (43%), Gaps = 44/241 (18%)
Query: 210 EVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLI 269
+ I +T M GV + + +VL A + L+ G+Q+HA + + + V + L+
Sbjct: 68 QAISTYTNMVTAGVPPDNFAFPAVLKATAGIQDLNLGKQLHAHVFKFGQALPTAVPNSLV 127
Query: 270 TMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDV 329
MY KCG++ + +FD ++D V WNS+I+ ++ E ++ +F M V P
Sbjct: 128 NMYGKCGDIDAARRVFDEITNRDDVSWNSMINAACRFEEWELAVHLFRLMLLENVGPTSF 187
Query: 330 TLVGVLSACS------------------------YT-----------GKVKEGREIFESM 354
TLV V ACS +T G+V E + +F+
Sbjct: 188 TLVSVAHACSNLINGLLLGKQVHAFVLRNGDWRTFTNNALVTMYAKLGRVYEAKTLFDVF 247
Query: 355 KSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAM---PFEPDAIIWGSLLGACRTHMK 411
K LV T ++ L + + E+A+ + M P+ + S+L AC +H++
Sbjct: 248 DDKDLVSWNT-----IISSLSQNDRFEEALLYLHVMLQSGVRPNGVTLASVLPAC-SHLE 301
Query: 412 L 412
+
Sbjct: 302 M 302
>gi|357454909|ref|XP_003597735.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240430|gb|ABD32288.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355486783|gb|AES67986.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 620
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 201/537 (37%), Positives = 310/537 (57%), Gaps = 10/537 (1%)
Query: 72 TNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYV----NNNRIDVARKLFEVMPE 127
T +V Y + R +FD++PK+N+ W +I GY ++N I + K+ +
Sbjct: 86 TKLVHLYAVSNSLLNARNLFDKIPKQNLFLWNVLIRGYAWNGPHDNAIILYHKMLDYGLR 145
Query: 128 KNEVSWTAMLMGYTQCGRIQDAWEL----FKAMPMKSVVASNSMILGLGQNGEVQKARVV 183
+ + +L + I + + K+ + + ++I + G V A V
Sbjct: 146 PDNFTLPFVLKACSALSAIGEGRSIHEYVIKSGWERDLFVGAALIDMYAKCGCVMDAGRV 205
Query: 184 FDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASL 243
FD++ +D W+ M+ Y + G+ E I L M GVR +L++V+S A +A L
Sbjct: 206 FDKIVVRDAVLWNSMLAAYAQNGHPDESISLCREMAANGVRPTEATLVTVISSSADVACL 265
Query: 244 DHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGY 303
+GR++H R F + V + LI MY KCG + +F+ K +V WN+II+GY
Sbjct: 266 PYGREIHGFGWRHGFQSNDKVKTALIDMYAKCGSVKVALALFERLREKRVVSWNAIITGY 325
Query: 304 AQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPK 363
A +GL +L +F +M PD +T VGVL+ACS + EGR ++ M Y + P
Sbjct: 326 AMHGLAVGALDLFDKMRKED-RPDHITFVGVLAACSRGRLLDEGRALYNLMVRDYGITPT 384
Query: 364 TEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLL 423
+HY CM+DLLG GQ+++A LI M +PD+ +WG+LL +C+ H ++LAE+A +KL+
Sbjct: 385 VQHYTCMIDLLGHCGQLDEAYDLIRNMSVKPDSGVWGALLNSCKIHGNVELAELALEKLI 444
Query: 424 QLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRD 483
+LEP ++G Y++L+N+YA G++ V +LR+ M + + K CSWIEV+ KV+ F D
Sbjct: 445 ELEPDDSGNYVILANMYAQSGKWEGVEKLRQVMIDKRIKKNIACSWIEVKNKVYAFLAGD 504
Query: 484 CVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLV 543
VSH I L+++ GL+ EAGY PD+ V HDV+E+EK + HSE+LA+A+GL+
Sbjct: 505 -VSHSNSDAIYAELKRLEGLMHEAGYAPDTGSVFHDVEEDEKTSMVCSHSERLAIAFGLI 563
Query: 544 KLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
G + + KNLR+C DCH AIK ISK+M REI +RD NR+H FK G+CSC D+W
Sbjct: 564 STSPGTRLLITKNLRICEDCHVAIKFISKIMEREITVRDVNRYHSFKHGMCSCGDHW 620
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 94/178 (52%), Gaps = 10/178 (5%)
Query: 232 SVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASK 291
S+L C +L+ G+Q+HAQ + +A+ L+ +Y L+ + +FD +
Sbjct: 52 SLLQSCIDSKALNPGKQLHAQFYHLGIAYNQDLATKLVHLYAVSNSLLNARNLFDKIPKQ 111
Query: 292 DIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIF 351
++ +WN +I GYA G + ++ ++H+M G+ PD+ TL VL ACS + EGR I
Sbjct: 112 NLFLWNVLIRGYAWNGPHDNAIILYHKMLDYGLRPDNFTLPFVLKACSALSAIGEGRSIH 171
Query: 352 ESMKSKYLVEPKTEH----YACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGA 405
E Y+++ E A ++D+ + G V DA ++ + + DA++W S+L A
Sbjct: 172 E-----YVIKSGWERDLFVGAALIDMYAKCGCVMDAGRVFDKIVVR-DAVLWNSMLAA 223
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 87/372 (23%), Positives = 159/372 (42%), Gaps = 60/372 (16%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVV 69
T +V Y + A LF ++P++N+ W V++ G+ + D+A L+ M + +
Sbjct: 86 TKLVHLYAVSNSLLNARNLFDKIPKQNLFLWNVLIRGYAWNGPHDNAIILYHKMLDYGLR 145
Query: 70 AQT---NMVLGYCQD-GRVDEGREIFDEMPK----KNVISWTTMISGYVNNNRIDVARKL 121
VL C + EGR I + + K +++ +I Y + A ++
Sbjct: 146 PDNFTLPFVLKACSALSAIGEGRSIHEYVIKSGWERDLFVGAALIDMYAKCGCVMDAGRV 205
Query: 122 FEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSV---------VASNSM----- 167
F+ + ++ V W +ML Y Q G ++ L + M V V S+S
Sbjct: 206 FDKIVVRDAVLWNSMLAAYAQNGHPDESISLCREMAANGVRPTEATLVTVISSSADVACL 265
Query: 168 -----ILGLG--------------------QNGEVQKARVVFDQMREKDDATWSGMIKVY 202
I G G + G V+ A +F+++REK +W+ +I Y
Sbjct: 266 PYGREIHGFGWRHGFQSNDKVKTALIDMYAKCGSVKVALALFERLREKRVVSWNAIITGY 325
Query: 203 ERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDV 262
G + +DLF M+KE R + + + VL+ C+ LD GR ++ +VR + +
Sbjct: 326 AMHGLAVGALDLFDKMRKED-RPDHITFVGVLAACSRGRLLDEGRALYNLMVR-DYGITP 383
Query: 263 YVA--SVLITMYIKCGELVKGKLIFDNFASK-DIVMWNSIISGYAQYG---LGEKSLKVF 316
V + +I + CG+L + + N + K D +W ++++ +G L E +L+
Sbjct: 384 TVQHYTCMIDLLGHCGQLDEAYDLIRNMSVKPDSGVWGALLNSCKIHGNVELAELALEKL 443
Query: 317 HEMFSSGVMPDD 328
E+ PDD
Sbjct: 444 IEL-----EPDD 450
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 92/202 (45%), Gaps = 15/202 (7%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVV 69
TA++ Y + G + A LF ++ EK VVSW ++ G+ A LFD M ++D
Sbjct: 288 TALIDMYAKCGSVKVALALFERLREKRVVSWNAIITGYAMHGLAVGALDLFDKMRKEDRP 347
Query: 70 AQTNM--VLGYCQDGR-VDEGREIFDEMPKKNVIS-----WTTMISGYVNNNRIDVARKL 121
VL C GR +DEGR +++ M + I+ +T MI + ++D A L
Sbjct: 348 DHITFVGVLAACSRGRLLDEGRALYNLMVRDYGITPTVQHYTCMIDLLGHCGQLDEAYDL 407
Query: 122 FEVMPEKNEVS-WTAMLMGYTQCGRIQDA-WELFKAMPMKSVVASNSMILG--LGQNGE- 176
M K + W A+L G ++ A L K + ++ + N +IL Q+G+
Sbjct: 408 IRNMSVKPDSGVWGALLNSCKIHGNVELAELALEKLIELEPDDSGNYVILANMYAQSGKW 467
Query: 177 --VQKARVVFDQMREKDDATWS 196
V+K R V R K + S
Sbjct: 468 EGVEKLRQVMIDKRIKKNIACS 489
Score = 45.8 bits (107), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 84/176 (47%), Gaps = 18/176 (10%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV---VSWTVMLGGFIRDSRIDDAR 57
+ E+ VVSW A++ GY G+ A LF +M +++ +++ +L R +D+ R
Sbjct: 310 LREKRVVSWNAIITGYAMHGLAVGALDLFDKMRKEDRPDHITFVGVLAACSRGRLLDEGR 369
Query: 58 RLFDMMPEKDVVAQTNM-------VLGYCQDGRVDEGREIFDEMP-KKNVISWTTMISGY 109
L+++M + T +LG+C G++DE ++ M K + W +++
Sbjct: 370 ALYNLMVRDYGITPTVQHYTCMIDLLGHC--GQLDEAYDLIRNMSVKPDSGVWGALLNSC 427
Query: 110 VNNNRIDVA----RKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSV 161
+ +++A KL E+ P+ + ++ + Y Q G+ + +L + M K +
Sbjct: 428 KIHGNVELAELALEKLIELEPD-DSGNYVILANMYAQSGKWEGVEKLRQVMIDKRI 482
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 54/268 (20%), Positives = 107/268 (39%), Gaps = 49/268 (18%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDM 62
ER++ A++ Y + G + +AG +F ++ ++ V W ML + ++ D++ L
Sbjct: 180 ERDLFVGAALIDMYAKCGCVMDAGRVFDKIVVRDAVLWNSMLAAYAQNGHPDESISLCRE 239
Query: 63 MPEKDV----------------VA-----------------------QTNMVLGYCQDGR 83
M V VA +T ++ Y + G
Sbjct: 240 MAANGVRPTEATLVTVISSSADVACLPYGREIHGFGWRHGFQSNDKVKTALIDMYAKCGS 299
Query: 84 VDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEK---NEVSWTAMLMGY 140
V +F+ + +K V+SW +I+GY + A LF+ M ++ + +++ +L
Sbjct: 300 VKVALALFERLREKRVVSWNAIITGYAMHGLAVGALDLFDKMRKEDRPDHITFVGVLAAC 359
Query: 141 TQCGRIQDAWELFKAMP-----MKSVVASNSMILGLGQNGEVQKARVVFDQMREK-DDAT 194
++ + + L+ M +V MI LG G++ +A + M K D
Sbjct: 360 SRGRLLDEGRALYNLMVRDYGITPTVQHYTCMIDLLGHCGQLDEAYDLIRNMSVKPDSGV 419
Query: 195 WSGMIKVYERKG-YELEVIDLFTLMQKE 221
W ++ + G EL + L L++ E
Sbjct: 420 WGALLNSCKIHGNVELAELALEKLIELE 447
>gi|218192417|gb|EEC74844.1| hypothetical protein OsI_10704 [Oryza sativa Indica Group]
Length = 614
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/489 (39%), Positives = 290/489 (59%), Gaps = 8/489 (1%)
Query: 109 YVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAM-------PMKSV 161
Y R D A ++FE M ++ VSW AM+ G+ G A ++F+ + P
Sbjct: 2 YARCGRPDDAYQMFEEMQYRDVVSWNAMISGFAHAGLFGRAMDVFRELVALQCPKPDAGT 61
Query: 162 VASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKE 221
+AS +G + ++ + VFD+MR +W+ M+ VY +E ++LF MQK+
Sbjct: 62 MASILPSMGKARVEDIALLKGVFDEMRFTGLISWNAMLAVYTNNEMHVEAVELFMRMQKD 121
Query: 222 GVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKG 281
G+ + +L +VL C +++L G+++H + R + + + + L+ MY CG L +
Sbjct: 122 GIEPDAVTLATVLPSCGEVSALSLGKRIHEVIKRRRMCSSMLLENALMDMYANCGCLKEA 181
Query: 282 KLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYT 341
+ +FD+ ++D+V W SIIS Y ++G G +++ +F +M G+ PD + V +L+ACS+
Sbjct: 182 RDVFDSMGTRDVVSWTSIISAYGRHGHGREAIDLFEKMCGQGLEPDSIAFVAILAACSHA 241
Query: 342 GKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGS 401
G + G+ F SM S++ + PK EHYACMVDLLGRAG + +A I MP +P+ +WG+
Sbjct: 242 GLLDMGKHYFYSMTSEFHIAPKLEHYACMVDLLGRAGCIREAYDFIMVMPIKPNERVWGA 301
Query: 402 LLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNV 461
LLGACR H +D+ +AA LL+L PK G Y+LLSNIYA GR+ DV+ +R M + +
Sbjct: 302 LLGACRIHSNMDIGLLAADSLLRLAPKQTGYYVLLSNIYARAGRWADVSMVRSVMESKGI 361
Query: 462 IKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVD 521
K PG S E+ VH F D SHP+ MI + L ++ +RE GY P+ LHDV+
Sbjct: 362 KKLPGVSNAELGDSVHTFHIGD-TSHPQSKMIYKKLSELLRRIREMGYNPEVEATLHDVE 420
Query: 522 EEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILR 581
EE+K L HSEKLA+A+ L+ G PIR+ NLR C DCH A KLIS + GREIIL+
Sbjct: 421 EEDKEGHLSVHSEKLAIAFLLINTNPGTPIRITMNLRTCSDCHHAAKLISTIAGREIILK 480
Query: 582 DANRFHHFK 590
D NR H+ K
Sbjct: 481 DVNRIHYMK 489
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 116/249 (46%), Gaps = 17/249 (6%)
Query: 16 YVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMM-------PEKDV 68
Y G +A +F +M ++VVSW M+ GF A +F + P+
Sbjct: 2 YARCGRPDDAYQMFEEMQYRDVVSWNAMISGFAHAGLFGRAMDVFRELVALQCPKPDAGT 61
Query: 69 VAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEK 128
+A +G + + + +FDEM +ISW M++ Y NN A +LF M +K
Sbjct: 62 MASILPSMGKARVEDIALLKGVFDEMRFTGLISWNAMLAVYTNNEMHVEAVELFMRM-QK 120
Query: 129 NEVSWTAMLMGYT--QCGRI------QDAWELFKAMPM-KSVVASNSMILGLGQNGEVQK 179
+ + A+ + CG + + E+ K M S++ N+++ G +++
Sbjct: 121 DGIEPDAVTLATVLPSCGEVSALSLGKRIHEVIKRRRMCSSMLLENALMDMYANCGCLKE 180
Query: 180 ARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCAS 239
AR VFD M +D +W+ +I Y R G+ E IDLF M +G+ + + +++L+ C+
Sbjct: 181 ARDVFDSMGTRDVVSWTSIISAYGRHGHGREAIDLFEKMCGQGLEPDSIAFVAILAACSH 240
Query: 240 LASLDHGRQ 248
LD G+
Sbjct: 241 AGLLDMGKH 249
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 90/192 (46%), Gaps = 17/192 (8%)
Query: 6 VVSWTAMVRGYVEEGMITEAGTLFWQMP----EKNVVSWTVMLGGFIRDSRIDDARRLFD 61
++SW AM+ Y M EA LF +M E + V+ +L S + +R+ +
Sbjct: 92 LISWNAMLAVYTNNEMHVEAVELFMRMQKDGIEPDAVTLATVLPSCGEVSALSLGKRIHE 151
Query: 62 MMPEK----DVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDV 117
++ + ++ + ++ Y G + E R++FD M ++V+SWT++IS Y +
Sbjct: 152 VIKRRRMCSSMLLENALMDMYANCGCLKEARDVFDSMGTRDVVSWTSIISAYGRHGHGRE 211
Query: 118 ARKLFEVMP----EKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASN-----SMI 168
A LFE M E + +++ A+L + G + F +M + +A M+
Sbjct: 212 AIDLFEKMCGQGLEPDSIAFVAILAACSHAGLLDMGKHYFYSMTSEFHIAPKLEHYACMV 271
Query: 169 LGLGQNGEVQKA 180
LG+ G +++A
Sbjct: 272 DLLGRAGCIREA 283
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 98/221 (44%), Gaps = 41/221 (18%)
Query: 271 MYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFS-SGVMPDDV 329
MY +CG +F+ +D+V WN++ISG+A GL +++ VF E+ + PD
Sbjct: 1 MYARCGRPDDAYQMFEEMQYRDVVSWNAMISGFAHAGLFGRAMDVFRELVALQCPKPDAG 60
Query: 330 TLVGVLSACSYTGKVKEG-----REIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAM 384
T+ +L + GK + + +F+ M+ L+ + M+ + +A+
Sbjct: 61 TMASILPS---MGKARVEDIALLKGVFDEMRFTGLIS-----WNAMLAVYTNNEMHVEAV 112
Query: 385 KLIEAMP---FEPDAIIWGSLLGAC----------RTHMKLDLAEVAAKKLLQLEPKNAG 431
+L M EPDA+ ++L +C R H + + + LL+ NA
Sbjct: 113 ELFMRMQKDGIEPDAVTLATVLPSCGEVSALSLGKRIHEVIKRRRMCSSMLLE----NA- 167
Query: 432 PYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEV 472
L ++YA+ G + ++ +M R+V+ SW +
Sbjct: 168 ----LMDMYANCGCLKEARDVFDSMGTRDVV-----SWTSI 199
>gi|302763721|ref|XP_002965282.1| hypothetical protein SELMODRAFT_83339 [Selaginella moellendorffii]
gi|300167515|gb|EFJ34120.1| hypothetical protein SELMODRAFT_83339 [Selaginella moellendorffii]
Length = 721
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 215/637 (33%), Positives = 339/637 (53%), Gaps = 55/637 (8%)
Query: 17 VEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVL 76
+ G + EA ++F + KN+ SW +++ + A LF M L
Sbjct: 87 AKHGSLCEARSIFDAIQHKNIFSWNIIISAYAHRGHPSTALHLFAKMDVPPTAMTFATAL 146
Query: 77 GYCQD-GRVDEGREIFDEMP-----KKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNE 130
C G + GREI + + +VI T + S Y + A+ +F+ +P KN
Sbjct: 147 SACSSLGDLQRGREIHARIKASRGIRPSVILDTAIFSMYAKCGDLSTAKSVFDRIPAKNV 206
Query: 131 VSWTAMLMGYTQCGRIQ-DAWELFKAMP-------------------------------- 157
VSW A++ Y Q G A +LF+ M
Sbjct: 207 VSWNALIAAYAQSGHSHHQALDLFEKMAEHGVRPCRATFVGVLGACNDVTSLEKIHARIV 266
Query: 158 -------MKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELE 210
++ V N+++ + G ++ AR +F +M+ +D + + MI + ++G E
Sbjct: 267 ETGLQFDVRDVGVQNALLNMYAKCGSLEVARDIFRKMQRRDQVSMNVMIATFAQQGLGKE 326
Query: 211 VIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLV------RCQFDVDVYV 264
I +F M EG+ + + SV++ C+ +L+ G+++H ++V +C +V V
Sbjct: 327 SIQVFREMDLEGLPQDDTTFASVITACSCCGALEFGKRIHKRVVEPVLGRKCCLP-NVVV 385
Query: 265 ASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGV 324
+ L++MY KCG L + K +F +K+ V WN++++ A G G+++ GV
Sbjct: 386 ETALVSMYGKCGTLEQAKAVFKAMTTKNSVSWNAMLAACAHQGQGDEAAAFLRAAACEGV 445
Query: 325 MPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAM 384
D + + VL ACS++G ++ + F+ M S + + P E+Y CMVDLL R+G++ DA
Sbjct: 446 ELDSASFISVLIACSHSGMLEVAYDHFQLMLSDFDLVPAAENYRCMVDLLARSGRLGDAD 505
Query: 385 KLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQG 444
+L+ +MPF PDAI W +LLG CR L+ A AA++ LEP+N PY LLS++Y++ G
Sbjct: 506 ELMNSMPFSPDAIAWRTLLGGCRVQGSLENAASAAEQAFNLEPQNTAPYTLLSSLYSATG 565
Query: 445 RFHDVAELRKNMRKRNVIK-PPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGL 503
+ ++ ELR +M++R + K PG S IEV +VH F D SHP+ I+R L+ +
Sbjct: 566 KKDELVELRSSMKERGLRKLVPGRSVIEVHGRVHEFVAGDS-SHPQIDKILRELDILNVE 624
Query: 504 LREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDC 563
L++AG+ P + V+HD+ E+K L HSEKLAVA+GL+ G+P+ V+KNLRVC DC
Sbjct: 625 LKQAGFVPSTDGVVHDLKTEDKEEILALHSEKLAVAFGLISTKSGIPLLVLKNLRVCSDC 684
Query: 564 HSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
H AIKLISK+ R I +RDANRFH F+ G CSC DYW
Sbjct: 685 HGAIKLISKLRSRVITVRDANRFHRFQSGTCSCGDYW 721
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 107/352 (30%), Positives = 177/352 (50%), Gaps = 28/352 (7%)
Query: 74 MVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMP-EKNEVS 132
+VL + G + E R IFD + KN+ SW +IS Y + A LF M ++
Sbjct: 82 LVLMLAKHGSLCEARSIFDAIQHKNIFSWNIIISAYAHRGHPSTALHLFAKMDVPPTAMT 141
Query: 133 WTAMLMGYTQCGRIQDAWELFKAMPMK-----SVVASNSMILGLGQNGEVQKARVVFDQM 187
+ L + G +Q E+ + SV+ ++ + G++ A+ VFD++
Sbjct: 142 FATALSACSSLGDLQRGREIHARIKASRGIRPSVILDTAIFSMYAKCGDLSTAKSVFDRI 201
Query: 188 REKDDATWSGMIKVYERKGY-ELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHG 246
K+ +W+ +I Y + G+ + +DLF M + GVR + + VL C + SL+
Sbjct: 202 PAKNVVSWNALIAAYAQSGHSHHQALDLFEKMAEHGVRPCRATFVGVLGACNDVTSLE-- 259
Query: 247 RQVHAQLVRC--QFDV-DVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGY 303
++HA++V QFDV DV V + L+ MY KCG L + IF +D V N +I+ +
Sbjct: 260 -KIHARIVETGLQFDVRDVGVQNALLNMYAKCGSLEVARDIFRKMQRRDQVSMNVMIATF 318
Query: 304 AQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPK 363
AQ GLG++S++VF EM G+ DD T V++ACS G ++ G+ I K +VEP
Sbjct: 319 AQQGLGKESIQVFREMDLEGLPQDDTTFASVITACSCCGALEFGKRIH-----KRVVEPV 373
Query: 364 TEHYAC---------MVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGAC 406
C +V + G+ G +E A + +AM + +++ W ++L AC
Sbjct: 374 LGRKCCLPNVVVETALVSMYGKCGTLEQAKAVFKAMTTK-NSVSWNAMLAAC 424
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 85/349 (24%), Positives = 156/349 (44%), Gaps = 54/349 (15%)
Query: 160 SVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQ 219
S +N ++L L ++G + +AR +FD ++ K+ +W+ +I Y +G+ + LF M
Sbjct: 75 SAYLNNLLVLMLAKHGSLCEARSIFDAIQHKNIFSWNIIISAYAHRGHPSTALHLFAKMD 134
Query: 220 KEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQ-FDVDVYVASVLITMYIKCGEL 278
+ F + LS C+SL L GR++HA++ + V + + + +MY KCG+L
Sbjct: 135 VPPTAMTFA---TALSACSSLGDLQRGREIHARIKASRGIRPSVILDTAIFSMYAKCGDL 191
Query: 279 VKGKLIFDNFASKDIVMWNSIISGYAQYGLG-EKSLKVFHEMFSSGVMPDDVTLVGVLSA 337
K +FD +K++V WN++I+ YAQ G ++L +F +M GV P T VGVL A
Sbjct: 192 STAKSVFDRIPAKNVVSWNALIAAYAQSGHSHHQALDLFEKMAEHGVRPCRATFVGVLGA 251
Query: 338 C-----------------------------------SYTGKVKEGREIFESMKSKYLVEP 362
C + G ++ R+IF M+ + V
Sbjct: 252 CNDVTSLEKIHARIVETGLQFDVRDVGVQNALLNMYAKCGSLEVARDIFRKMQRRDQVSM 311
Query: 363 KTEHYACMVDLLGRAGQVEDAMKLIEAMPFE---PDAIIWGSLLGACRTHMKLDLAEVAA 419
M+ + G ++++++ M E D + S++ AC L+ +
Sbjct: 312 NV-----MIATFAQQGLGKESIQVFREMDLEGLPQDDTTFASVITACSCCGALEFGKRIH 366
Query: 420 KKLLQ--LEPKNAGPYIL----LSNIYASQGRFHDVAELRKNMRKRNVI 462
K++++ L K P ++ L ++Y G + K M +N +
Sbjct: 367 KRVVEPVLGRKCCLPNVVVETALVSMYGKCGTLEQAKAVFKAMTTKNSV 415
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 90/389 (23%), Positives = 173/389 (44%), Gaps = 37/389 (9%)
Query: 1 MPERNVVSWTAMVRGYVEEGMI-TEAGTLFWQMPEKNVVSWTVMLGGFIR---------- 49
+P +NVVSW A++ Y + G +A LF +M E V G +
Sbjct: 201 IPAKNVVSWNALIAAYAQSGHSHHQALDLFEKMAEHGVRPCRATFVGVLGACNDVTSLEK 260
Query: 50 -DSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISG 108
+RI + FD+ +DV Q ++ Y + G ++ R+IF +M +++ +S MI+
Sbjct: 261 IHARIVETGLQFDV---RDVGVQNALLNMYAKCGSLEVARDIFRKMQRRDQVSMNVMIAT 317
Query: 109 YVNNN----RIDVARKL-FEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAM------- 156
+ I V R++ E +P+ ++ ++ +++ + CG ++ + K +
Sbjct: 318 FAQQGLGKESIQVFREMDLEGLPQ-DDTTFASVITACSCCGALEFGKRIHKRVVEPVLGR 376
Query: 157 --PMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDL 214
+ +VV +++ G+ G +++A+ VF M K+ +W+ M+ +G E
Sbjct: 377 KCCLPNVVVETALVSMYGKCGTLEQAKAVFKAMTTKNSVSWNAMLAACAHQGQGDEAAAF 436
Query: 215 FTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVAS--VLITMY 272
EGV ++ S ISVL C+ L+ H QL+ FD+ + ++ +
Sbjct: 437 LRAAACEGVELDSASFISVLIACSHSGMLEVAYD-HFQLMLSDFDLVPAAENYRCMVDLL 495
Query: 273 IKCGELVKGKLIFDNFA-SKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTL 331
+ G L + ++ S D + W +++ G G E + + F+ + P +
Sbjct: 496 ARSGRLGDADELMNSMPFSPDAIAWRTLLGGCRVQGSLENAASAAEQAFN--LEPQNTAP 553
Query: 332 VGVLSAC-SYTGKVKEGREIFESMKSKYL 359
+LS+ S TGK E E+ SMK + L
Sbjct: 554 YTLLSSLYSATGKKDELVELRSSMKERGL 582
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 83/177 (46%), Gaps = 9/177 (5%)
Query: 249 VHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGL 308
+H ++ R Y+ ++L+ M K G L + + IFD K+I WN IIS YA G
Sbjct: 63 IHQKITRAGLGSSAYLNNLLVLMLAKHGSLCEARSIFDAIQHKNIFSWNIIISAYAHRGH 122
Query: 309 GEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYA 368
+L +F +M V P +T LSACS G ++ GREI +K+ + P
Sbjct: 123 PSTALHLFAKM---DVPPTAMTFATALSACSSLGDLQRGREIHARIKASRGIRPSVILDT 179
Query: 369 CMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRT-----HMKLDLAEVAAK 420
+ + + G + A + + +P + + + W +L+ A H LDL E A+
Sbjct: 180 AIFSMYAKCGDLSTAKSVFDRIPAK-NVVSWNALIAAYAQSGHSHHQALDLFEKMAE 235
>gi|115458888|ref|NP_001053044.1| Os04g0469400 [Oryza sativa Japonica Group]
gi|113564615|dbj|BAF14958.1| Os04g0469400, partial [Oryza sativa Japonica Group]
Length = 401
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 176/399 (44%), Positives = 258/399 (64%)
Query: 202 YERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVD 261
+ G E + LF M G++ + +L+ +L A L+SL G+++H L+R +F V+
Sbjct: 3 FAENGLLHEAVALFGKMLNAGIQPDSVALVGILGAIAGLSSLTKGKEIHGFLIRGKFPVE 62
Query: 262 VYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFS 321
V S L+ MY CG + +FD KD+V+W ++I+ +G G++++ +F M
Sbjct: 63 GAVVSSLVDMYSGCGSMNYALKVFDEAKCKDVVLWTAMINATGMHGHGKQAIYIFKRMLE 122
Query: 322 SGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVE 381
+GV PD V+ + +L ACS++ V EG+ + M SKY ++P EHYAC+VDLLGR+GQ E
Sbjct: 123 TGVSPDHVSFLALLYACSHSKLVDEGKFYLDMMVSKYKLQPWQEHYACVVDLLGRSGQTE 182
Query: 382 DAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYA 441
+A K I++MP EP +++W +LLGACR H +LA +A KLL+LEP N G Y+L+SN++A
Sbjct: 183 EAYKFIKSMPLEPKSVVWCALLGACRIHKNHELAMIATDKLLELEPDNPGNYVLVSNVFA 242
Query: 442 SQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIG 501
G++++V E+R M ++ + K P CSWIE+ VH FT RD + +++ E
Sbjct: 243 EMGKWNNVKEIRTKMTEQGLRKDPACSWIEIGNTVHTFTARDHSHRDSQAIHLKLAEITE 302
Query: 502 GLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCG 561
L RE Y D+SFVLHDV EEEK+ L HSE+LA+++GL+ G P+R+ KNLRVCG
Sbjct: 303 KLRREGQYVEDTSFVLHDVSEEEKIDLLHRHSERLAISFGLISTASGTPLRIAKNLRVCG 362
Query: 562 DCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
DCH KL+SK+ REI++RDANRFHHF G CSC D+W
Sbjct: 363 DCHEFTKLVSKLFEREIVVRDANRFHHFSGGTCSCGDFW 401
Score = 40.4 bits (93), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 44/92 (47%), Gaps = 1/92 (1%)
Query: 156 MPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLF 215
P++ V S S++ G + A VFD+ + KD W+ MI G+ + I +F
Sbjct: 59 FPVEGAVVS-SLVDMYSGCGSMNYALKVFDEAKCKDVVLWTAMINATGMHGHGKQAIYIF 117
Query: 216 TLMQKEGVRVNFPSLISVLSVCASLASLDHGR 247
M + GV + S +++L C+ +D G+
Sbjct: 118 KRMLETGVSPDHVSFLALLYACSHSKLVDEGK 149
>gi|297795617|ref|XP_002865693.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311528|gb|EFH41952.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 640
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 217/574 (37%), Positives = 336/574 (58%), Gaps = 58/574 (10%)
Query: 84 VDEGREIFDEMPKKNVISWTTMISGYV--NNNRIDVARKLF-EVMP----EKNEVSWTAM 136
+D +IF++MP++N SW T+I G+ + ++ +A LF E+M E N ++ ++
Sbjct: 68 LDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFCEMMSDEFIEPNRFTFPSV 127
Query: 137 LMG-----------------------------------YTQCGRIQDAWELF------KA 155
L Y CG ++DA LF +
Sbjct: 128 LKACAKTGKIQQGKQIHGLALKYGFGGDEFVMSNLVRMYVICGLMKDACVLFYKNIIERE 187
Query: 156 MPM--------KSVVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGY 207
M M VV N MI G + G+ + AR++FD+MR++ +W+ MI Y + G+
Sbjct: 188 MVMMIDRRKRDGEVVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSQNGF 247
Query: 208 ELEVIDLFTLMQK-EGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVAS 266
+ +++F M+K E +R N+ +L+SVL + L SL+ G +H +D + S
Sbjct: 248 FKDAVEVFREMKKGEDIRPNYVTLVSVLPAVSRLGSLELGEWLHLYAEDSGIRIDDVLGS 307
Query: 267 VLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMP 326
LI MY KCG + K ++F+ ++++ W+++I+G+A +G ++ F +M +GV P
Sbjct: 308 ALIDMYSKCGIIEKAIMVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRP 367
Query: 327 DDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKL 386
DV + +L+ACS+ G V+EGR F M S +EP+ EHY CMVDLLGR G +++A +
Sbjct: 368 SDVAYINLLTACSHAGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRLGLLDEAEEF 427
Query: 387 IEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRF 446
I MP +PD +IW +LLGACR H +++ + A L+ + P ++G Y+ LSN+YASQG +
Sbjct: 428 ILNMPIKPDDVIWKALLGACRMHRNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNW 487
Query: 447 HDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLRE 506
+V+E+R M++ ++ K PGCSWI+++ +H F D SHP I ML +I LR
Sbjct: 488 SEVSEMRLRMKEMDIRKDPGCSWIDIDGVLHEFLVED-DSHPRAKEINSMLVEISDKLRL 546
Query: 507 AGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSA 566
AGY P ++ VL +++EE+K ++L YHSEK+A A+GL+ G PIR++KNLR+C DCHS+
Sbjct: 547 AGYRPITTQVLLNLEEEDKENALHYHSEKMATAFGLISTSPGKPIRIVKNLRICEDCHSS 606
Query: 567 IKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
IKLISKV R+I +RD RFHHF+DG CSC DYW
Sbjct: 607 IKLISKVYKRKITVRDRKRFHHFQDGSCSCMDYW 640
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 141/319 (44%), Gaps = 65/319 (20%)
Query: 1 MPERNVVSWTAMVRGYVE--EGMITEAGTLFWQM-----PEKNVVSWTVMLGGFIRDSRI 53
MP+RN SW ++RG+ E E A TLF +M E N ++ +L + +I
Sbjct: 78 MPQRNCFSWNTIIRGFSESDEDKALIAITLFCEMMSDEFIEPNRFTFPSVLKACAKTGKI 137
Query: 54 DDARRLFDMMPE----KDVVAQTNMVLGYCQDGRVDEG----------REIFDEMPKKN- 98
+++ + + D +N+V Y G + + RE+ + ++
Sbjct: 138 QQGKQIHGLALKYGFGGDEFVMSNLVRMYVICGLMKDACVLFYKNIIEREMVMMIDRRKR 197
Query: 99 ---VISWTTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKA 155
V+ W MI GY+ AR LF+ M +++ VSW M+ GY+Q G +DA E+F+
Sbjct: 198 DGEVVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSQNGFFKDAVEVFRE 257
Query: 156 M-----------------PMKSVVAS-----------------------NSMILGLGQNG 175
M P S + S +++I + G
Sbjct: 258 MKKGEDIRPNYVTLVSVLPAVSRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCG 317
Query: 176 EVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLS 235
++KA +VF+++ ++ TWS MI + G + ID F M++ GVR + + I++L+
Sbjct: 318 IIEKAIMVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLT 377
Query: 236 VCASLASLDHGRQVHAQLV 254
C+ ++ GR+ +Q+V
Sbjct: 378 ACSHAGLVEEGRRYFSQMV 396
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 69/312 (22%), Positives = 144/312 (46%), Gaps = 39/312 (12%)
Query: 110 VNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQD--AWELFKAMPMKSVVASN-- 165
+++ +D A K+F MP++N SW ++ G+++ + A LF M + N
Sbjct: 63 LHHRDLDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFCEMMSDEFIEPNRF 122
Query: 166 ---SMILGLGQNGEVQKARVVFDQMRE----KDDATWSGMIKVYERKGYELEVIDLFTLM 218
S++ + G++Q+ + + + D+ S ++++Y G +
Sbjct: 123 TFPSVLKACAKTGKIQQGKQIHGLALKYGFGGDEFVMSNLVRMYVICG-----------L 171
Query: 219 QKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGEL 278
K+ + + ++I R++ + R + D +V + +V+I Y++ G+
Sbjct: 172 MKDACVLFYKNIIE--------------REMVMMIDRRKRDGEVVLWNVMIDGYMRLGDC 217
Query: 279 VKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEM-FSSGVMPDDVTLVGVLSA 337
+++FD + +V WN++ISGY+Q G + +++VF EM + P+ VTLV VL A
Sbjct: 218 KAARMLFDKMRQRSVVSWNTMISGYSQNGFFKDAVEVFREMKKGEDIRPNYVTLVSVLPA 277
Query: 338 CSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAI 397
S G ++ G E + + ++D+ + G +E A+ + E +P E + I
Sbjct: 278 VSRLGSLELG-EWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIMVFERLPRE-NVI 335
Query: 398 IWGSLLGACRTH 409
W +++ H
Sbjct: 336 TWSAMINGFAIH 347
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 93/199 (46%), Gaps = 13/199 (6%)
Query: 6 VVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPE 65
VV W M+ GY+ G A LF +M +++VVSW M+ G+ ++ DA +F M +
Sbjct: 201 VVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSQNGFFKDAVEVFREMKK 260
Query: 66 -----KDVVAQTNMVLGYCQDGRVDEGREIF----DEMPKKNVISWTTMISGYVNNNRID 116
+ V +++ + G ++ G + D + + + + +I Y I+
Sbjct: 261 GEDIRPNYVTLVSVLPAVSRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIE 320
Query: 117 VARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSV----VASNSMILGLG 172
A +FE +P +N ++W+AM+ G+ G+ DA + F M V VA +++
Sbjct: 321 KAIMVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACS 380
Query: 173 QNGEVQKARVVFDQMREKD 191
G V++ R F QM D
Sbjct: 381 HAGLVEEGRRYFSQMVSVD 399
>gi|212721478|ref|NP_001131178.1| uncharacterized protein LOC100192486 [Zea mays]
gi|194690792|gb|ACF79480.1| unknown [Zea mays]
Length = 617
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 201/469 (42%), Positives = 278/469 (59%), Gaps = 6/469 (1%)
Query: 134 TAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARVVFDQMREKDDA 193
+ +L Y G + + F + VV +M+ L G+V AR +FD M ++D
Sbjct: 153 SGVLSMYAALGDVASSRAAFAEIACPDVVCVTAMVAALAAGGDVDAARDLFDGMPQRDHV 212
Query: 194 TWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQL 253
WS MI Y G E + LF M G V +L+SVL+ CA + +LD G+ VH +
Sbjct: 213 AWSAMIAGYMHVGRSREALMLFDEMLSAGTTVGEATLVSVLTACAQIGTLDRGKWVHWYV 272
Query: 254 VRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSL 313
+ + + + L+ MY KCG +V +F++ A +++ W S +SG A G+G + L
Sbjct: 273 RSRGMQMSIKLGTALVDMYSKCGAVVTAMEVFESMAERNVYTWTSAVSGLAMNGMGTECL 332
Query: 314 KVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDL 373
++F M +G+ P+ V+ V VL CS G V EGR F+SM KY V+P EHY CMVDL
Sbjct: 333 QLFKRMEGAGIQPNGVSFVAVLRGCSMAGLVDEGRACFDSM-DKYGVDPWPEHYGCMVDL 391
Query: 374 LGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPY 433
GRAG+++DA+ I MP EP +WG+LL A R H +DL + A KLL +E +N +
Sbjct: 392 YGRAGRLDDAISFINDMPMEPHEGVWGALLNASRIHNSVDLGKYALDKLLAIESENDAAH 451
Query: 434 ILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMF--TGRDCVSHPEHP 491
+ LSNIYA + V+ +R M+ + V K PG S IEV+ KVH F GR HP +
Sbjct: 452 VQLSNIYAESQNWKGVSRVRGMMKAKGVKKVPGWSTIEVDGKVHEFYVGGR---LHPRYN 508
Query: 492 MIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPEGVPI 551
I ML ++ LR GY ++ VL D++EEEK ++ HSEKLA+A+GL+ LPE V I
Sbjct: 509 EIELMLAEMDRRLRLQGYTANTREVLFDIEEEEKEGAISLHSEKLALAFGLIVLPEDVEI 568
Query: 552 RVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
R++KNLRVC DCH IKL+SKV REI++RD NRFHHFK G CSCRDYW
Sbjct: 569 RIVKNLRVCMDCHRYIKLVSKVFNREIVMRDRNRFHHFKGGECSCRDYW 617
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 103/234 (44%), Gaps = 8/234 (3%)
Query: 53 IDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
+ +R F + DVV T MV G VD R++FD MP+++ ++W+ MI+GY++
Sbjct: 165 VASSRAAFAEIACPDVVCVTAMVAALAAGGDVDAARDLFDGMPQRDHVAWSAMIAGYMHV 224
Query: 113 NRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDA----WELFKAMPMKSVVAS 164
R A LF+ M E + ++L Q G + W + S+
Sbjct: 225 GRSREALMLFDEMLSAGTTVGEATLVSVLTACAQIGTLDRGKWVHWYVRSRGMQMSIKLG 284
Query: 165 NSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVR 224
+++ + G V A VF+ M E++ TW+ + G E + LF M+ G++
Sbjct: 285 TALVDMYSKCGAVVTAMEVFESMAERNVYTWTSAVSGLAMNGMGTECLQLFKRMEGAGIQ 344
Query: 225 VNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGEL 278
N S ++VL C+ +D GR + + D ++ +Y + G L
Sbjct: 345 PNGVSFVAVLRGCSMAGLVDEGRACFDSMDKYGVDPWPEHYGCMVDLYGRAGRL 398
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 103/233 (44%), Gaps = 16/233 (6%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFD-MM 63
+VV TAMV G + A LF MP+++ V+W+ M+ G++ R +A LFD M+
Sbjct: 179 DVVCVTAMVAALAAGGDVDAARDLFDGMPQRDHVAWSAMIAGYMHVGRSREALMLFDEML 238
Query: 64 PEKDVVAQTNM--VLGYC-QDGRVDEGREIF----DEMPKKNVISWTTMISGYVNNNRID 116
V + + VL C Q G +D G+ + + ++ T ++ Y +
Sbjct: 239 SAGTTVGEATLVSVLTACAQIGTLDRGKWVHWYVRSRGMQMSIKLGTALVDMYSKCGAVV 298
Query: 117 VARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSV----VASNSMILGLG 172
A ++FE M E+N +WT+ + G G + +LFK M + V+ +++ G
Sbjct: 299 TAMEVFESMAERNVYTWTSAVSGLAMNGMGTECLQLFKRMEGAGIQPNGVSFVAVLRGCS 358
Query: 173 QNGEVQKARVVFDQMREKDDATW----SGMIKVYERKGYELEVIDLFTLMQKE 221
G V + R FD M + W M+ +Y R G + I M E
Sbjct: 359 MAGLVDEGRACFDSMDKYGVDPWPEHYGCMVDLYGRAGRLDDAISFINDMPME 411
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 79/170 (46%), Gaps = 16/170 (9%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEK----------NVVSWTVMLGGFIRD 50
MP+R+ V+W+AM+ GY+ G EA LF +M +V++ +G R
Sbjct: 206 MPQRDHVAWSAMIAGYMHVGRSREALMLFDEMLSAGTTVGEATLVSVLTACAQIGTLDRG 265
Query: 51 SRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYV 110
+ R M + + T +V Y + G V E+F+ M ++NV +WT+ +SG
Sbjct: 266 KWVHWYVRSRGM--QMSIKLGTALVDMYSKCGAVVTAMEVFESMAERNVYTWTSAVSGLA 323
Query: 111 NNNRIDVARKLFEVMP----EKNEVSWTAMLMGYTQCGRIQDAWELFKAM 156
N +LF+ M + N VS+ A+L G + G + + F +M
Sbjct: 324 MNGMGTECLQLFKRMEGAGIQPNGVSFVAVLRGCSMAGLVDEGRACFDSM 373
>gi|115456255|ref|NP_001051728.1| Os03g0821700 [Oryza sativa Japonica Group]
gi|29124127|gb|AAO65868.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108711802|gb|ABF99597.1| expressed protein [Oryza sativa Japonica Group]
gi|113550199|dbj|BAF13642.1| Os03g0821700 [Oryza sativa Japonica Group]
gi|125588431|gb|EAZ29095.1| hypothetical protein OsJ_13153 [Oryza sativa Japonica Group]
gi|215736898|dbj|BAG95827.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 602
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 188/427 (44%), Positives = 273/427 (63%), Gaps = 1/427 (0%)
Query: 174 NGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISV 233
G + AR VFD+M ++ TWS MI Y R G + +DLF MQ GV+ + ++I V
Sbjct: 177 GGFLGDARNVFDRMPKESAVTWSAMIGGYVRGGLSSDAVDLFREMQANGVQADEVTVIGV 236
Query: 234 LSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDI 293
L+ L +L+ R V + R V + + LI KCG++ +F+ + +
Sbjct: 237 LAAATDLGALELARWVRRFVEREGIGKSVTLCNALIDTLAKCGDVDGAVAVFEGMQQRSV 296
Query: 294 VMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFES 353
V W S+I A G G+++++VF EM +GV PDDV +GVL+ACS+ G V EG F++
Sbjct: 297 VSWTSVIDALAMEGRGKEAVRVFEEMKVAGVPPDDVAFIGVLTACSHAGMVDEGCGYFDA 356
Query: 354 MKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLD 413
MK +Y +EPK EHY CMVD+ GRAG VE AM+ + MP +P+ +IW SL+ ACR H +L+
Sbjct: 357 MKVEYGIEPKIEHYGCMVDMFGRAGMVERAMEFVRTMPIQPNPVIWRSLVSACRAHGRLE 416
Query: 414 LAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVE 473
L E + LL P + YI+LSN++A R+ + +E+R+ M KR + K PGCS +E++
Sbjct: 417 LGESITRSLLHEYPAHEANYIMLSNVFALTQRWKEKSEIRREMSKRGIKKVPGCSIVELD 476
Query: 474 KKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHS 533
+VH F D SHP++ I RM+E++ LR G+ +S VL D+DEE+K +L++HS
Sbjct: 477 GEVHEFIAGD-ESHPQYKDIYRMVEEMARELRRVGHIAATSEVLLDLDEEDKEGALQWHS 535
Query: 534 EKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGL 593
EKLA+A+ L++ P G +RV+KNLRVC DCH+AIK IS+V REI++RD +RFH FKDG
Sbjct: 536 EKLAIAFALLRTPPGTQVRVVKNLRVCSDCHAAIKCISQVYRREIVVRDRSRFHRFKDGS 595
Query: 594 CSCRDYW 600
CSC+D+W
Sbjct: 596 CSCKDFW 602
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 104/200 (52%), Gaps = 5/200 (2%)
Query: 209 LEVIDLFTLMQKEGVRVNFPSLISVLSVCASL-ASLDHGRQVHAQLVRCQFDVDVYVASV 267
L F LM + V N + +L CA+L S D G Q HA ++ F D YV++
Sbjct: 108 LRAAAFFPLMLRGAVVPNKFTFPFLLKACAALPGSPDVGLQAHAAALKFGFATDQYVSNT 167
Query: 268 LITMY--IKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVM 325
LI MY G L + +FD + V W+++I GY + GL ++ +F EM ++GV
Sbjct: 168 LIHMYSCFGGGFLGDARNVFDRMPKESAVTWSAMIGGYVRGGLSSDAVDLFREMQANGVQ 227
Query: 326 PDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMK 385
D+VT++GVL+A + G ++ R + ++ + + + T A ++D L + G V+ A+
Sbjct: 228 ADEVTVIGVLAAATDLGALELARWVRRFVEREGIGKSVTLCNA-LIDTLAKCGDVDGAVA 286
Query: 386 LIEAMPFEPDAIIWGSLLGA 405
+ E M + + W S++ A
Sbjct: 287 VFEGMQ-QRSVVSWTSVIDA 305
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 129/285 (45%), Gaps = 41/285 (14%)
Query: 82 GRVDEGREIFDEMPKKNVISWTTMISGYV----NNNRIDVARKLFEVMPEKNEVSWTAML 137
G + + R +FD MPK++ ++W+ MI GYV +++ +D+ R++ + +EV+ +L
Sbjct: 178 GFLGDARNVFDRMPKESAVTWSAMIGGYVRGGLSSDAVDLFREMQANGVQADEVTVIGVL 237
Query: 138 MGYTQCGRIQDAWELFKAMPM----KSVVASNSMILGLGQNGEVQKARVVFDQMREKDDA 193
T G ++ A + + + KSV N++I L + G+V A VF+ M+++
Sbjct: 238 AAATDLGALELARWVRRFVEREGIGKSVTLCNALIDTLAKCGDVDGAVAVFEGMQQRSVV 297
Query: 194 TWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQL 253
+W+ +I +G E + +F M+ GV + + I VL+ C+ +D G
Sbjct: 298 SWTSVIDALAMEGRGKEAVRVFEEMKVAGVPPDDVAFIGVLTACSHAGMVDEG------- 350
Query: 254 VRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSL 313
CG K+ + I + ++ + + G+ E+++
Sbjct: 351 ---------------------CGYFDAMKVEYG--IEPKIEHYGCMVDMFGRAGMVERAM 387
Query: 314 KVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKY 358
+ M + P+ V ++SAC G+++ G I S+ +Y
Sbjct: 388 EFVRTM---PIQPNPVIWRSLVSACRAHGRLELGESITRSLLHEY 429
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 108/253 (42%), Gaps = 22/253 (8%)
Query: 20 GMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYC 79
G + +A +F +MP+++ V+W+ M+GG++R DA LF M V A V+G
Sbjct: 178 GFLGDARNVFDRMPKESAVTWSAMIGGYVRGGLSSDAVDLFREMQANGVQADEVTVIGVL 237
Query: 80 QDGRVDEG---------REIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKNE 130
D G R + E K+V +I +D A +FE M +++
Sbjct: 238 AAA-TDLGALELARWVRRFVEREGIGKSVTLCNALIDTLAKCGDVDGAVAVFEGMQQRSV 296
Query: 131 VSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGL----GQNGEVQKARVVFDQ 186
VSWT+++ GR ++A +F+ M + V + +G+ G V + FD
Sbjct: 297 VSWTSVIDALAMEGRGKEAVRVFEEMKVAGVPPDDVAFIGVLTACSHAGMVDEGCGYFDA 356
Query: 187 MR-----EKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLA 241
M+ E + M+ ++ R G ++ M + V + SL+ S C +
Sbjct: 357 MKVEYGIEPKIEHYGCMVDMFGRAGMVERAMEFVRTMPIQPNPVIWRSLV---SACRAHG 413
Query: 242 SLDHGRQVHAQLV 254
L+ G + L+
Sbjct: 414 RLELGESITRSLL 426
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 91/197 (46%), Gaps = 17/197 (8%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFI---RDSRIDDAR 57
MP+ + V+W+AM+ GYV G+ ++A LF +M V + V + G + D +
Sbjct: 190 MPKESAVTWSAMIGGYVRGGLSSDAVDLFREMQANGVQADEVTVIGVLAAATDLGALELA 249
Query: 58 RLFDMMPEKDVVAQTNMVLGYCQD-----GRVDEGREIFDEMPKKNVISWTTMISGYVNN 112
R E++ + ++ + D G VD +F+ M +++V+SWT++I
Sbjct: 250 RWVRRFVEREGIGKSVTLCNALIDTLAKCGDVDGAVAVFEGMQQRSVVSWTSVIDALAME 309
Query: 113 NRIDVARKLFEVMP----EKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVAS---- 164
R A ++FE M ++V++ +L + G + + F AM ++ +
Sbjct: 310 GRGKEAVRVFEEMKVAGVPPDDVAFIGVLTACSHAGMVDEGCGYFDAMKVEYGIEPKIEH 369
Query: 165 -NSMILGLGQNGEVQKA 180
M+ G+ G V++A
Sbjct: 370 YGCMVDMFGRAGMVERA 386
>gi|357126224|ref|XP_003564788.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Brachypodium distachyon]
Length = 515
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 187/437 (42%), Positives = 276/437 (63%), Gaps = 1/437 (0%)
Query: 164 SNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGV 223
+N+++ + AR +FD+M +D TW+ ++ R G + ++ M GV
Sbjct: 80 ANALVDAYAKLSRGGAARALFDEMPRRDVVTWTSLLTGLARSGSHDAALRVYRDMVASGV 139
Query: 224 RVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKL 283
+ + + LS CA +L+ G+ VHA VR + + V + L++MY K G L + +
Sbjct: 140 EPDEYVVAAALSSCAGSTTLELGQSVHATAVRLGLEPFLSVGNSLVSMYAKTGSLREARK 199
Query: 284 IFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGK 343
+FD + V W ++I GYAQ G GE+SL+V+ EM SG PD VT +G+L ACS+ G
Sbjct: 200 VFDATRLRCPVTWTALIVGYAQNGRGEESLQVYAEMVHSGCRPDYVTFIGLLFACSHAGL 259
Query: 344 VKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL 403
V GR F+SM++ + + P +HYACMVD+LGRAG++++AM+L++ + DA +W +LL
Sbjct: 260 VDAGRAHFKSMQADHGITPGPDHYACMVDVLGRAGRLDEAMELLDQSTMKLDATVWKALL 319
Query: 404 GACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIK 463
GACRTH +LAE AA+ + +L+P +A PYI+LSN+Y+ + R+ DVA +R M+ R + K
Sbjct: 320 GACRTHRNAELAERAAEMVWRLDPTDAVPYIMLSNLYSRERRWSDVARIRTLMKSRGIAK 379
Query: 464 PPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEE 523
PGCSW+ H+F D HP I R +E++ +R G+ D+ + L D E
Sbjct: 380 EPGCSWVVASGVTHLFYVED-RGHPRTDEIYRKVEEMMEKVRAEGFVADTDWALQDEAPE 438
Query: 524 EKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDA 583
+ L +HSE+LAVA+GL+ LP G P+RV KNLRVCGDCH AIK+++KV GREIILRD+
Sbjct: 439 GREKGLAHHSERLAVAFGLLALPAGAPVRVFKNLRVCGDCHVAIKMVAKVYGREIILRDS 498
Query: 584 NRFHHFKDGLCSCRDYW 600
N FHH +DG+CSC DYW
Sbjct: 499 NCFHHMRDGVCSCGDYW 515
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 107/242 (44%), Gaps = 20/242 (8%)
Query: 74 MVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVM----PEKN 129
+V Y + R R +FDEMP+++V++WT++++G + D A +++ M E +
Sbjct: 83 LVDAYAKLSRGGAARALFDEMPRRDVVTWTSLLTGLARSGSHDAALRVYRDMVASGVEPD 142
Query: 130 EVSWTAMLMGYTQCGRIQDAWELFKAM------PMKSVVASNSMILGLGQNGEVQKARVV 183
E A L ++ + P SV NS++ + G +++AR V
Sbjct: 143 EYVVAAALSSCAGSTTLELGQSVHATAVRLGLEPFLSV--GNSLVSMYAKTGSLREARKV 200
Query: 184 FDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASL 243
FD R + TW+ +I Y + G E + ++ M G R ++ + I +L C+ +
Sbjct: 201 FDATRLRCPVTWTALIVGYAQNGRGEESLQVYAEMVHSGCRPDYVTFIGLLFACSHAGLV 260
Query: 244 DHGRQVHAQLVRCQFDVDVYVA----SVLITMYIKCGELVKGKLIFDNFASK-DIVMWNS 298
D GR A Q D + + ++ + + G L + + D K D +W +
Sbjct: 261 DAGR---AHFKSMQADHGITPGPDHYACMVDVLGRAGRLDEAMELLDQSTMKLDATVWKA 317
Query: 299 II 300
++
Sbjct: 318 LL 319
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 75/142 (52%), Gaps = 2/142 (1%)
Query: 262 VYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFS 321
++VA+ L+ Y K + +FD +D+V W S+++G A+ G + +L+V+ +M +
Sbjct: 77 LHVANALVDAYAKLSRGGAARALFDEMPRRDVVTWTSLLTGLARSGSHDAALRVYRDMVA 136
Query: 322 SGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVE 381
SGV PD+ + LS+C+ + ++ G+ + + + +EP +V + + G +
Sbjct: 137 SGVEPDEYVVAAALSSCAGSTTLELGQSV-HATAVRLGLEPFLSVGNSLVSMYAKTGSLR 195
Query: 382 DAMKLIEAMPFEPDAIIWGSLL 403
+A K+ +A + W +L+
Sbjct: 196 EARKVFDATRLRC-PVTWTALI 216
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 99/226 (43%), Gaps = 23/226 (10%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLF-DMM----- 63
A+V Y + A LF +MP ++VV+WT +L G R D A R++ DM+
Sbjct: 81 NALVDAYAKLSRGGAARALFDEMPRRDVVTWTSLLTGLARSGSHDAALRVYRDMVASGVE 140
Query: 64 PEKDVVAQTNMVLGYCQDGRVDE-GREIFDEMPKKNVISW----TTMISGYVNNNRIDVA 118
P++ VVA L C E G+ + + + + +++S Y + A
Sbjct: 141 PDEYVVAAA---LSSCAGSTTLELGQSVHATAVRLGLEPFLSVGNSLVSMYAKTGSLREA 197
Query: 119 RKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGL----GQN 174
RK+F+ + V+WTA+++GY Q GR +++ +++ M +GL
Sbjct: 198 RKVFDATRLRCPVTWTALIVGYAQNGRGEESLQVYAEMVHSGCRPDYVTFIGLLFACSHA 257
Query: 175 GEVQKARVVFDQMREKDDAT-----WSGMIKVYERKGYELEVIDLF 215
G V R F M+ T ++ M+ V R G E ++L
Sbjct: 258 GLVDAGRAHFKSMQADHGITPGPDHYACMVDVLGRAGRLDEAMELL 303
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 97/224 (43%), Gaps = 32/224 (14%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQM------PEKNVV---------SWTVMLG 45
MP R+VV+WT+++ G G A ++ M P++ VV S T+ LG
Sbjct: 103 MPRRDVVTWTSLLTGLARSGSHDAALRVYRDMVASGVEPDEYVVAAALSSCAGSTTLELG 162
Query: 46 GFIRDSRIDDARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTM 105
+ + + + E + ++V Y + G + E R++FD + ++WT +
Sbjct: 163 QSVHATAV-------RLGLEPFLSVGNSLVSMYAKTGSLREARKVFDATRLRCPVTWTAL 215
Query: 106 ISGYVNNNRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSV 161
I GY N R + + +++ M + V++ +L + G + FK+M
Sbjct: 216 IVGYAQNGRGEESLQVYAEMVHSGCRPDYVTFIGLLFACSHAGLVDAGRAHFKSMQADHG 275
Query: 162 VASNS-----MILGLGQNGEVQKARVVFDQMREKDDAT-WSGMI 199
+ M+ LG+ G + +A + DQ K DAT W ++
Sbjct: 276 ITPGPDHYACMVDVLGRAGRLDEAMELLDQSTMKLDATVWKALL 319
>gi|217426788|gb|ACK44496.1| AT5G09950-like protein [Arabidopsis arenosa]
Length = 772
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 227/623 (36%), Positives = 342/623 (54%), Gaps = 53/623 (8%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRL- 59
M E++ VSW +M+ G + G EA + M ++ G F S + L
Sbjct: 95 MMEKDSVSWNSMITGLDQNGCFIEAVERYQSMRRHEILP-----GSFTLISSLSSCASLK 149
Query: 60 ------------FDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMIS 107
+ + +V ++ Y + G ++E R+IF MP+ + +SW ++I
Sbjct: 150 WAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIG 209
Query: 108 GYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQ--------------DAWELF 153
++ R +PE A+ G + RI + +
Sbjct: 210 ALASSER---------SLPEAVACFLNALRAG-QKLNRITFSSVLSAVSSLSFGELGKQI 259
Query: 154 KAMPMKSVVAS-----NSMILGLGQNGEVQKARVVFDQMREK-DDATWSGMIKVYERKGY 207
+ +K +A N++I G+ GE+ +F +M E+ DD TW+ MI Y
Sbjct: 260 HGLALKYNIADEATTENALIACYGKCGEMDGCEKIFSRMSERRDDVTWNSMISGYIHNEL 319
Query: 208 ELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASV 267
+ +DL M + G R++ +VLS AS+A+L+ G +VHA VR + DV V S
Sbjct: 320 LAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSA 379
Query: 268 LITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSG-VMP 326
L+ MY KCG L F+ ++ WNS+ISGYA++G GE++LK+F M G P
Sbjct: 380 LVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFANMKLDGQTPP 439
Query: 327 DDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKL 386
D VT VGVLSACS+ G ++EG + FESM Y + P+ EH++CM DLLGRAG+++
Sbjct: 440 DHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADLLGRAGELDKLEDF 499
Query: 387 IEAMPFEPDAIIWGSLLGAC--RTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQG 444
I+ MP +P+ +IW ++LGAC K +L + AA+ L QLEP+NA Y+LL N+YA+ G
Sbjct: 500 IDKMPVKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGG 559
Query: 445 RFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLL 504
R+ D+ + RK M+ +V K G SW+ ++ VHMF D SHP+ +I + L+++ +
Sbjct: 560 RWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGD-KSHPDTDVIYKKLKELNRKM 618
Query: 505 REAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGL-VKLPEGVPIRVMKNLRVCGDC 563
R+AGY P + F L+D+++E K L YHSEKLAVA+ L + +PIR+MKNLRVCGDC
Sbjct: 619 RDAGYVPQTGFALYDLEQENKEEILSYHSEKLAVAFVLAAQRSSTLPIRIMKNLRVCGDC 678
Query: 564 HSAIKLISKVMGREIILRDANRF 586
HSA K ISK+ GR+IILRD+NR+
Sbjct: 679 HSAFKYISKIEGRQIILRDSNRY 701
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 95/418 (22%), Positives = 177/418 (42%), Gaps = 56/418 (13%)
Query: 46 GFIRDSRIDDARRLF-DMMPEKDVVAQTNMVL-------GYCQDGRVDEGREIFDEMPKK 97
G +R ++A +LF DM DV ++ ++L + + +GRE+ +
Sbjct: 3 GLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEQVGLKKGREVHGHVITT 62
Query: 98 NVISW-----TTMISGYVNNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWEL 152
++ + +++ Y I AR++F M EK+ VSW +M+ G Q G +A E
Sbjct: 63 GLVDFMVGIGNGLVNMYAKCGSIADARRVFCFMMEKDSVSWNSMITGLDQNGCFIEAVER 122
Query: 153 FKAMPMKSVV---------------------------------------ASNSMILGLGQ 173
+++M ++ SN+++ +
Sbjct: 123 YQSMRRHEILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAE 182
Query: 174 NGEVQKARVVFDQMREKDDATWSGMIKVYERKGYEL-EVIDLFTLMQKEGVRVNFPSLIS 232
G + + R +F M E D +W+ +I L E + F + G ++N + S
Sbjct: 183 TGYLNECRKIFSSMPEHDQVSWNSIIGALASSERSLPEAVACFLNALRAGQKLNRITFSS 242
Query: 233 VLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFAS-K 291
VLS +SL+ + G+Q+H ++ + + LI Y KCGE+ + IF + +
Sbjct: 243 VLSAVSSLSFGELGKQIHGLALKYNIADEATTENALIACYGKCGEMDGCEKIFSRMSERR 302
Query: 292 DIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIF 351
D V WNS+ISGY L K+L + M +G D VLSA + ++ G E+
Sbjct: 303 DDVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEV- 361
Query: 352 ESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTH 409
+ + +E + +VD+ + G+++ A++ MP ++ W S++ H
Sbjct: 362 HACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVR-NSYSWNSMISGYARH 418
>gi|224057824|ref|XP_002299342.1| predicted protein [Populus trichocarpa]
gi|222846600|gb|EEE84147.1| predicted protein [Populus trichocarpa]
Length = 684
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 222/642 (34%), Positives = 332/642 (51%), Gaps = 57/642 (8%)
Query: 10 TAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVV 69
++++ Y + G + +A +F +M E+N+VSW ++ + + D +F M E +
Sbjct: 49 NSVLKMYCKCGSLADARKVFDEMRERNLVSWNTIISAYAENGVFDKGFCMFSNMLELETK 108
Query: 70 AQTNMVLGYCQDGRVDEGREIFDEMPKKNV-------ISWTTMISG-YVNNNRIDVARKL 121
+ +G+ + G EI ++ + S T IS YV ++ A +
Sbjct: 109 PNGSTYIGFLRSLLNPSGLEIGKQIHSHAIRSGLGSNASVNTAISNMYVKCGWLEGAELV 168
Query: 122 FEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVAS----------------- 164
FE M EKN V+WT +++GYTQ R DA LF M + V
Sbjct: 169 FEKMSEKNAVAWTGIMVGYTQAERQMDALALFAKMVNEGVELDEYVFSIVLKACAGLEEL 228
Query: 165 ------NSMILGLGQNGEV----------------QKARVVFDQMREKDDATWSGMIKVY 202
+ I+ LG EV + A F+ + E +D +WS +I Y
Sbjct: 229 NFGRQIHGHIVKLGLESEVSVGTPLVDFYVKCSNLESATKAFEWISEPNDVSWSALITGY 288
Query: 203 ERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDV 262
+ G E + F ++ V +N + S+ C++LA + G Q HA ++
Sbjct: 289 CQMGEFEEALKTFESLRTRSVDINSFTYTSIFQACSALADFNSGAQAHADAIKSSLVAYQ 348
Query: 263 YVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSS 322
+ S +ITMY +CG L +F++ D V W +II+GYA G ++LK+F M
Sbjct: 349 HGESAMITMYSRCGRLDYATRVFESIDDPDAVAWTAIIAGYAYQGNAPEALKLFRRMQDC 408
Query: 323 GVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVED 382
GV P+ VT + VL+ACS++G V EGR+ ESM S Y V +HY CMVD+ RAG +++
Sbjct: 409 GVRPNAVTFIAVLTACSHSGLVIEGRQYLESMSSNYGVATTIDHYDCMVDIYSRAGFLQE 468
Query: 383 AMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYAS 442
A++LI +MPF PDA+ W LLG C T+ L++ E+AA+ L QL+P++ YIL+ N+YAS
Sbjct: 469 ALELIRSMPFSPDAMSWKCLLGGCWTYRNLEIGELAAENLFQLDPEDTAGYILMFNLYAS 528
Query: 443 QGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGG 502
G++ + A +RK M +RN+ K CSWI V+ KVH F D HP+ I LE +
Sbjct: 529 FGKWKEAANVRKMMAERNLRKELSCSWITVKGKVHRFIVGD-KHHPQTEEIYSKLEALND 587
Query: 503 --LLREAGYCPDSSFVLHDVDEE--EKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLR 558
+ E G + DV E+ L HSE+LA+A+GL+ P P+ V KNLR
Sbjct: 588 SVIKEETGLLTE-----EDVSNSLPERKEQLLVHSERLALAFGLISTPSSAPVVVFKNLR 642
Query: 559 VCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
C DCH K +S + GREI++RD+ RFHHFK G CSC DYW
Sbjct: 643 ACKDCHDFGKQVSLITGREIVVRDSFRFHHFKLGECSCNDYW 684
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 135/276 (48%), Gaps = 10/276 (3%)
Query: 140 YTQCGRIQDAWE--LFKAMPMKSV-----VASNSMILGLGQNGEVQKARVVFDQMREKDD 192
+ CG+I+ ++ LF ++V NS++ + G + AR VFD+MRE++
Sbjct: 17 FEACGKIKSLFDGRLFHEQMQRTVKNPPEFLENSVLKMYCKCGSLADARKVFDEMRERNL 76
Query: 193 ATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQ 252
+W+ +I Y G + +F+ M + + N + I L + + L+ G+Q+H+
Sbjct: 77 VSWNTIISAYAENGVFDKGFCMFSNMLELETKPNGSTYIGFLRSLLNPSGLEIGKQIHSH 136
Query: 253 LVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKS 312
+R + V + + MY+KCG L +L+F+ + K+ V W I+ GY Q +
Sbjct: 137 AIRSGLGSNASVNTAISNMYVKCGWLEGAELVFEKMSEKNAVAWTGIMVGYTQAERQMDA 196
Query: 313 LKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVD 372
L +F +M + GV D+ VL AC+ ++ GR+I + K +E + +VD
Sbjct: 197 LALFAKMVNEGVELDEYVFSIVLKACAGLEELNFGRQIHGHI-VKLGLESEVSVGTPLVD 255
Query: 373 LLGRAGQVEDAMKLIEAMPFEPDAIIWGSLL-GACR 407
+ +E A K E + EP+ + W +L+ G C+
Sbjct: 256 FYVKCSNLESATKAFEWIS-EPNDVSWSALITGYCQ 290
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 98/204 (48%), Gaps = 3/204 (1%)
Query: 218 MQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGE 277
M+ G+ V+ S + C + SL GR H Q+ R + ++ + ++ MY KCG
Sbjct: 1 MEDAGISVSPRSYKCLFEACGKIKSLFDGRLFHEQMQRTVKNPPEFLENSVLKMYCKCGS 60
Query: 278 LVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSA 337
L + +FD +++V WN+IIS YA+ G+ +K +F M P+ T +G L +
Sbjct: 61 LADARKVFDEMRERNLVSWNTIISAYAENGVFDKGFCMFSNMLELETKPNGSTYIGFLRS 120
Query: 338 CSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAI 397
++ G++I L + + A + ++ + G +E A + E M E +A+
Sbjct: 121 LLNPSGLEIGKQIHSHAIRSGLGSNASVNTA-ISNMYVKCGWLEGAELVFEKMS-EKNAV 178
Query: 398 IW-GSLLGACRTHMKLDLAEVAAK 420
W G ++G + ++D + AK
Sbjct: 179 AWTGIMVGYTQAERQMDALALFAK 202
>gi|357124715|ref|XP_003564043.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Brachypodium distachyon]
Length = 599
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 201/473 (42%), Positives = 292/473 (61%), Gaps = 6/473 (1%)
Query: 132 SWTAMLMGYTQCGRIQDAWELFKAMPMKS---VVASNSMILGLGQNGEVQKARVVFDQMR 188
S+ A+L Y GR A LF + VV+ +M+ GL + G V AR +FD M
Sbjct: 129 SFNALLAAYLANGRADLASRLFGSCSSPGDLDVVSWTTMVGGLCRLGLVDDARKLFDGMP 188
Query: 189 EKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQ 248
E++ +W+ MI Y + G L+ +++F M+ G+ N S + C L GR+
Sbjct: 189 ERNLISWNAMISGYVKAGRFLDALEVFDQMRALGIEGNGFVAASAVVACTGAGVLARGRE 248
Query: 249 VHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGL 308
VH + + +D +A+ ++ MY KCG + + +F +K + WN +I G A +G
Sbjct: 249 VHRWVEQSGITMDEKLATAVVDMYCKCGSVEEAWHVFKVLPTKGLTSWNCMIGGLAVHGR 308
Query: 309 GEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYA 368
+ ++++FHEM V PDDVTLV VL+AC++TG V +G F + +Y +EPK EHY
Sbjct: 309 CKDAIELFHEMEREDVAPDDVTLVNVLTACAHTGMVSDGHNYFNYIVQRYGIEPKMEHYG 368
Query: 369 CMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPK 428
CMVDL GRAG +++A K+I+ MP EPD + G+L GAC+ H LDL E ++++L+P+
Sbjct: 369 CMVDLFGRAGLLDEAKKVIDDMPMEPDIGVLGALFGACKIHRDLDLGEAIGWRVIELDPQ 428
Query: 429 NAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSWIEVEKKVHMF-TGRDCVSH 487
N+G Y+LL+N+ AS G++ DVA++R+ M +RNV K G S IE++ +V F G C H
Sbjct: 429 NSGRYVLLANLLASAGQWVDVAKVRRLMDERNVSKEAGRSVIEIDGEVCEFQCGSLC--H 486
Query: 488 PEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDEEEKVHSLRYHSEKLAVAYGLVKLPE 547
+ I ++ + +R GY PD+S VLHD+ EEEK L+YHSEKLA+A+GL++
Sbjct: 487 AQEKEIFAAVKDMMRKIRLEGYMPDTSDVLHDITEEEKEVPLQYHSEKLAIAFGLLRTRP 546
Query: 548 GVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRDANRFHHFKDGLCSCRDYW 600
G +R+ KNLRVC DCH A K IS+V REI++RD NRFHHFKDG CSCRDYW
Sbjct: 547 GDTVRITKNLRVCRDCHEATKFISRVFEREIVVRDRNRFHHFKDGTCSCRDYW 599
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 138/293 (47%), Gaps = 45/293 (15%)
Query: 8 SWTAMVRGYVEEGMITEAGTLFWQMPEK---NVVSWTVMLGGFIRDSRIDDARRLFDMMP 64
S+ A++ Y+ G A LF +VVSWT M+GG R +DDAR+LFD MP
Sbjct: 129 SFNALLAAYLANGRADLASRLFGSCSSPGDLDVVSWTTMVGGLCRLGLVDDARKLFDGMP 188
Query: 65 EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNV-----ISWTTMI----SGYVNNNRI 115
E+++++ M+ GY + GR + E+FD+M + ++ + ++ +G + R
Sbjct: 189 ERNLISWNAMISGYVKAGRFLDALEVFDQMRALGIEGNGFVAASAVVACTGAGVLARGR- 247
Query: 116 DVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNG 175
+V R + + +E TA++ Y +CG +++AW +FK +P K + + N MI GL +G
Sbjct: 248 EVHRWVEQSGITMDEKLATAVVDMYCKCGSVEEAWHVFKVLPTKGLTSWNCMIGGLAVHG 307
Query: 176 EVQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLS 235
+ A I+LF M++E V + +L++VL+
Sbjct: 308 RCKDA-------------------------------IELFHEMEREDVAPDDVTLVNVLT 336
Query: 236 VCASLASLDHGRQVHAQLV-RCQFDVDVYVASVLITMYIKCGELVKGKLIFDN 287
CA + G +V R + + ++ ++ + G L + K + D+
Sbjct: 337 ACAHTGMVSDGHNYFNYIVQRYGIEPKMEHYGCMVDLFGRAGLLDEAKKVIDD 389
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 93/198 (46%), Gaps = 12/198 (6%)
Query: 5 NVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMP 64
+VVSWT MV G G++ +A LF MPE+N++SW M+ G+++ R DA +FD M
Sbjct: 160 DVVSWTTMVGGLCRLGLVDDARKLFDGMPERNLISWNAMISGYVKAGRFLDALEVFDQMR 219
Query: 65 ----EKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVIS----WTTMISGYVNNNRID 116
E + + V+ G + GRE+ + + + T ++ Y ++
Sbjct: 220 ALGIEGNGFVAASAVVACTGAGVLARGREVHRWVEQSGITMDEKLATAVVDMYCKCGSVE 279
Query: 117 VARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASN----SMILGLG 172
A +F+V+P K SW M+ G GR +DA ELF M + V + +++
Sbjct: 280 EAWHVFKVLPTKGLTSWNCMIGGLAVHGRCKDAIELFHEMEREDVAPDDVTLVNVLTACA 339
Query: 173 QNGEVQKARVVFDQMREK 190
G V F+ + ++
Sbjct: 340 HTGMVSDGHNYFNYIVQR 357
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 91/212 (42%), Gaps = 23/212 (10%)
Query: 1 MPERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEKNV-------VSWTVMLGGFIRDSRI 53
MPERN++SW AM+ GYV+ G +A +F QM + S V G +R
Sbjct: 187 MPERNLISWNAMISGYVKAGRFLDALEVFDQMRALGIEGNGFVAASAVVACTGAGVLARG 246
Query: 54 DDARRLFD----MMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGY 109
+ R + M EK A +M YC+ G V+E +F +P K + SW MI G
Sbjct: 247 REVHRWVEQSGITMDEKLATAVVDM---YCKCGSVEEAWHVFKVLPTKGLTSWNCMIGGL 303
Query: 110 VNNNRIDVARKLFEVMPEK----NEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVAS- 164
+ R A +LF M + ++V+ +L G + D F + + +
Sbjct: 304 AVHGRCKDAIELFHEMEREDVAPDDVTLVNVLTACAHTGMVSDGHNYFNYIVQRYGIEPK 363
Query: 165 ----NSMILGLGQNGEVQKARVVFDQMREKDD 192
M+ G+ G + +A+ V D M + D
Sbjct: 364 MEHYGCMVDLFGRAGLLDEAKKVIDDMPMEPD 395
>gi|356560286|ref|XP_003548424.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
mitochondrial-like [Glycine max]
Length = 911
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 210/618 (33%), Positives = 343/618 (55%), Gaps = 21/618 (3%)
Query: 3 ERNVVSWTAMVRGYVEEGMITEAGTLFWQMPEK----NVVSWTVMLGGFI----RDSRID 54
+ N SW +++ Y + A L +M ++++W +L G + ++ +
Sbjct: 295 DHNSASWNSIISSYAVNDCLNGAWDLLQEMESSGVKPDIITWNSLLSGHLLQGSYENVLT 354
Query: 55 DARRLFDMMPEKDVVAQTNMVLGYCQDGRVDEGREIFDEMPKK----NVISWTTMISGYV 110
+ R L + D + T+ + G + G+EI + + +V T+++ Y+
Sbjct: 355 NFRSLQSAGFKPDSCSITSALQAVIGLGCFNLGKEIHGYIMRSKLEYDVYVCTSLVDKYI 414
Query: 111 NNNRIDVARKLFEVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSV----VASNS 166
N+ +D A +F KN +W +++ GYT G +A +L M + + V NS
Sbjct: 415 KNDCLDKAEVVFHHTKNKNICAWNSLISGYTYKGLFDNAEKLLNQMKEEGIKPDLVTWNS 474
Query: 167 MILGLGQNGEVQKARVVFDQMRE----KDDATWSGMIKVYERKGYELEVIDLFTLMQKEG 222
++ G +G ++A V ++++ + +W+ MI + ++ + F+ MQ+E
Sbjct: 475 LVSGYSMSGRSEEALAVINRIKSLGLTPNVVSWTAMISGCCQNENYMDALQFFSQMQEEN 534
Query: 223 VRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGK 282
V+ N ++ ++L CA + L G ++H +R F D+Y+A+ LI MY K G+L
Sbjct: 535 VKPNSTTICTLLRACAGSSLLKIGEEIHCFSMRHGFLDDIYIATALIDMYGKGGKLKVAH 594
Query: 283 LIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTG 342
+F N K + WN ++ GYA YG GE+ +F EM +GV PD +T +LS C +G
Sbjct: 595 EVFRNIKEKTLPCWNCMMMGYAIYGHGEEVFTLFDEMRKTGVRPDAITFTALLSGCKNSG 654
Query: 343 KVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPFEPDAIIWGSL 402
V +G + F+SMK+ Y + P EHY+CMVDLLG+AG +++A+ I A+P + DA IWG++
Sbjct: 655 LVMDGWKYFDSMKTDYNINPTIEHYSCMVDLLGKAGFLDEALDFIHAVPQKADASIWGAV 714
Query: 403 LGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVI 462
L ACR H + +AE+AA+ LL+LEP N+ Y L+ NIY++ R+ DV L+++M V
Sbjct: 715 LAACRLHKDIKIAEIAARNLLRLEPYNSANYALMMNIYSTFDRWGDVERLKESMTALGVK 774
Query: 463 KPPGCSWIEVEKKVHMFTGRDCVSHPEHPMIMRMLEKIGGLLREAGYCPDSSFVLHDVDE 522
P SWI+V++ +H+F+ + SHPE I L ++ +++ GY D + V ++D+
Sbjct: 775 IPNVWSWIQVKQTIHVFS-TEGKSHPEEGEIYFELYQLISEIKKLGYVLDINCVHQNIDD 833
Query: 523 EEKVHSLRYHSEKLAVAYGLVKLPEGVPIRVMKNLRVCGDCHSAIKLISKVMGREIILRD 582
EK L H+EKLA+ YGL+K G PIRV+KN R+C DCH+ K IS REI LRD
Sbjct: 834 SEKEKVLLSHTEKLAMTYGLMKTKGGSPIRVVKNTRICHDCHTTAKYISLARNREIFLRD 893
Query: 583 ANRFHHFKDGLCSCRDYW 600
RFHHF +G CSC+D W
Sbjct: 894 GGRFHHFMNGECSCKDRW 911
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 103/417 (24%), Positives = 186/417 (44%), Gaps = 39/417 (9%)
Query: 11 AMVRGYVEEGMITEAGTLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKDVVA 70
A++ Y + I A +F + P + W ++ +R + +DA LF M A
Sbjct: 171 ALINLYEKYLGIDGANQVFDETPLQEDFLWNTIVMANLRSEKWEDALELFRRMQSASAKA 230
Query: 71 QTNMV---LGYCQDGR-VDEGREIFDEMPKKNVISWTTM----ISGYVNNNRIDVARKLF 122
+ L C R ++EG++I + + +S T++ +S Y NNR+++AR F
Sbjct: 231 TDGTIVKLLQACGKLRALNEGKQIHGYVIRFGRVSNTSICNSIVSMYSRNNRLELARVAF 290
Query: 123 EVMPEKNEVSWTAMLMGYTQCGRIQDAWELFKAMPMKSVVASNSMILGLGQNGEVQKARV 182
+ + N SW +++ Y + AW+L + M V
Sbjct: 291 DSTEDHNSASWNSIISSYAVNDCLNGAWDLLQEMESSGV--------------------- 329
Query: 183 VFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSVCASLAS 242
+ D TW+ ++ + +G V+ F +Q G + + S+ S L L
Sbjct: 330 ------KPDIITWNSLLSGHLLQGSYENVLTNFRSLQSAGFKPDSCSITSALQAVIGLGC 383
Query: 243 LDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMWNSIISG 302
+ G+++H ++R + + DVYV + L+ YIK L K +++F + +K+I WNS+ISG
Sbjct: 384 FNLGKEIHGYIMRSKLEYDVYVCTSLVDKYIKNDCLDKAEVVFHHTKNKNICAWNSLISG 443
Query: 303 YAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKSKYLVEP 362
Y GL + + K+ ++M G+ PD VT ++S S +G+ +E + +KS L P
Sbjct: 444 YTYKGLFDNAEKLLNQMKEEGIKPDLVTWNSLVSGYSMSGRSEEALAVINRIKSLGLT-P 502
Query: 363 KTEHYACMVDLLGRAGQVEDAMKLIEAMPFE---PDAIIWGSLLGACRTHMKLDLAE 416
+ M+ + DA++ M E P++ +LL AC L + E
Sbjct: 503 NVVSWTAMISGCCQNENYMDALQFFSQMQEENVKPNSTTICTLLRACAGSSLLKIGE 559
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 126/295 (42%), Gaps = 6/295 (2%)
Query: 177 VQKARVVFDQMREKDDATWSGMIKVYERKGYELEVIDLFTLMQKEGVRVNFPSLISVLSV 236
+ A VFD+ ++D W+ ++ R + ++LF MQ + +++ +L
Sbjct: 182 IDGANQVFDETPLQEDFLWNTIVMANLRSEKWEDALELFRRMQSASAKATDGTIVKLLQA 241
Query: 237 CASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMYIKCGELVKGKLIFDNFASKDIVMW 296
C L +L+ G+Q+H ++R + + + +++MY + L ++ FD+ + W
Sbjct: 242 CGKLRALNEGKQIHGYVIRFGRVSNTSICNSIVSMYSRNNRLELARVAFDSTEDHNSASW 301
Query: 297 NSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLVGVLSACSYTGKVKEGREIFESMKS 356
NSIIS YA + + EM SSGV PD +T +LS G + F S++S
Sbjct: 302 NSIISSYAVNDCLNGAWDLLQEMESSGVKPDIITWNSLLSGHLLQGSYENVLTNFRSLQS 361
Query: 357 KYLVEPKTEHYACMVDLLGRA--GQVEDAMKLIEAMPFEPDAIIWGSLLGACRTHMKLDL 414
+ + ++G ++ I E D + SL+ + LD
Sbjct: 362 AGFKPDSCSITSALQAVIGLGCFNLGKEIHGYIMRSKLEYDVYVCTSLVDKYIKNDCLDK 421
Query: 415 AEVAAKKLLQLEPKNAGPYILLSNIYASQGRFHDVAELRKNMRKRNVIKPPGCSW 469
AEV + KN + L + Y +G F D AE N K IKP +W
Sbjct: 422 AEVV---FHHTKNKNICAWNSLISGYTYKGLF-DNAEKLLNQMKEEGIKPDLVTW 472
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 85/349 (24%), Positives = 155/349 (44%), Gaps = 18/349 (5%)
Query: 156 MPMKS--VVASNSMILGLGQNGEVQKARVVFDQMREKDDATWSGMIKVYERKGYEL-EVI 212
MP K V SM+ Q G+ + A VF ++ W+ I+ + G + E++
Sbjct: 57 MPKKRNLVTMDGSMMRNYLQFGDFESATKVFFVGFARNYLLWNSFIEEFASFGGDSHEIL 116
Query: 213 DLFTLMQKEGVRVNFPSLISVLSVCASLASLDHGRQVHAQLVRCQFDVDVYVASVLITMY 272
+F + +GV+ + +L VL +C +L L G +VHA LV+ F VDV+++ LI +Y
Sbjct: 117 AVFKELHDKGVKFDSKALTVVLKICLALMELWLGMEVHACLVKRGFHVDVHLSCALINLY 176
Query: 273 IKCGELVKGKLIFDNFASKDIVMWNSIISGYAQYGLGEKSLKVFHEMFSSGVMPDDVTLV 332
K + +FD ++ +WN+I+ + E +L++F M S+ D T+V
Sbjct: 177 EKYLGIDGANQVFDETPLQEDFLWNTIVMANLRSEKWEDALELFRRMQSASAKATDGTIV 236
Query: 333 GVLSACSYTGKVKEGREIFESMKSKYLVEPKTEHYACMVDLLGRAGQVEDAMKLIEAMPF 392
+L AC + EG++I ++ T +V + R ++E A ++
Sbjct: 237 KLLQACGKLRALNEGKQI-HGYVIRFGRVSNTSICNSIVSMYSRNNRLELARVAFDSTE- 294
Query: 393 EPDAIIWGSLLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYAS----QGRFHD 448
+ ++ W S++ + + D A L ++E P I+ N S QG + +
Sbjct: 295 DHNSASWNSIISSYAVN---DCLNGAWDLLQEMESSGVKPDIITWNSLLSGHLLQGSYEN 351
Query: 449 VAELRKNMRKRNVIKPPGCSWIEVEKKVHMFTGRDCVSHPE--HPMIMR 495
V ++++ KP CS + + G C + + H IMR
Sbjct: 352 VLTNFRSLQSAG-FKPDSCS---ITSALQAVIGLGCFNLGKEIHGYIMR 396
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.322 0.137 0.417
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,497,853,974
Number of Sequences: 23463169
Number of extensions: 393675453
Number of successful extensions: 1136979
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 8515
Number of HSP's successfully gapped in prelim test: 3256
Number of HSP's that attempted gapping in prelim test: 912100
Number of HSP's gapped (non-prelim): 66068
length of query: 600
length of database: 8,064,228,071
effective HSP length: 149
effective length of query: 451
effective length of database: 8,863,183,186
effective search space: 3997295616886
effective search space used: 3997295616886
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 80 (35.4 bits)