Query 007518
Match_columns 600
No_of_seqs 244 out of 1359
Neff 4.0
Searched_HMMs 29240
Date Mon Mar 25 03:45:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007518.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007518hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3zzm_A Bifunctional purine bio 100.0 1E-212 5E-217 1687.7 49.8 508 74-600 9-523 (523)
2 4ehi_A Bifunctional purine bio 100.0 2E-210 7E-215 1672.0 44.6 503 74-600 23-534 (534)
3 1g8m_A Aicar transformylase-IM 100.0 9E-202 3E-206 1619.6 49.3 491 75-600 5-593 (593)
4 1zcz_A Bifunctional purine bio 100.0 5E-199 2E-203 1559.1 45.9 453 73-600 11-464 (464)
5 4ggi_A UDP-2,3-diacylglucosami 100.0 2.7E-38 9.2E-43 319.4 -19.2 212 368-593 45-277 (283)
6 2yvq_A Carbamoyl-phosphate syn 99.2 1.3E-11 4.6E-16 113.2 5.9 111 76-227 26-138 (143)
7 1a9x_A Carbamoyl phosphate syn 98.7 4.8E-09 1.6E-13 122.2 5.2 112 75-233 942-1056(1073)
8 2xw6_A MGS, methylglyoxal synt 98.7 2.3E-08 7.8E-13 92.1 6.0 118 74-233 2-124 (134)
9 1b93_A Protein (methylglyoxal 98.6 2.1E-08 7.1E-13 94.2 5.1 113 75-229 11-128 (152)
10 1vmd_A MGS, methylglyoxal synt 98.5 4E-08 1.4E-12 94.4 4.3 115 75-231 27-146 (178)
11 4e38_A Keto-hydroxyglutarate-a 78.3 1.6 5.6E-05 43.2 4.2 47 539-591 85-131 (232)
12 3l2b_A Probable manganase-depe 77.5 9.6 0.00033 35.8 9.1 45 554-598 131-175 (245)
13 3ff4_A Uncharacterized protein 76.6 2.6 8.8E-05 37.6 4.6 36 554-591 73-109 (122)
14 2ioj_A Hypothetical protein AF 75.9 1.7 5.7E-05 38.7 3.2 45 554-598 64-109 (139)
15 1cyd_A Carbonyl reductase; sho 73.1 15 0.0005 34.0 9.0 118 76-223 8-139 (244)
16 3lab_A Putative KDPG (2-keto-3 72.9 1.8 6.3E-05 42.6 2.9 32 554-588 76-107 (217)
17 4gmk_A Ribose-5-phosphate isom 72.6 2.8 9.7E-05 41.7 4.2 68 481-565 2-70 (228)
18 2w4l_A DCMP deaminse, deoxycyt 72.6 8.9 0.0003 36.3 7.4 102 488-592 16-151 (178)
19 3hv2_A Response regulator/HD d 66.6 58 0.002 27.4 12.3 94 74-234 13-108 (153)
20 2q5c_A NTRC family transcripti 66.0 6 0.00021 37.5 4.7 138 81-232 34-178 (196)
21 3ijr_A Oxidoreductase, short c 64.7 93 0.0032 30.1 13.1 33 75-107 47-79 (291)
22 2iya_A OLEI, oleandomycin glyc 63.8 10 0.00036 38.1 6.3 49 76-124 13-67 (424)
23 2hvw_A Deoxycytidylate deamina 63.7 13 0.00045 35.5 6.6 100 488-592 45-173 (184)
24 3f9i_A 3-oxoacyl-[acyl-carrier 63.3 33 0.0011 32.0 9.3 129 73-224 12-147 (249)
25 2d59_A Hypothetical protein PH 60.6 8 0.00027 34.6 4.3 36 554-591 92-128 (144)
26 1vhc_A Putative KHG/KDPG aldol 59.3 10 0.00034 36.9 5.1 48 539-592 68-115 (224)
27 1iuk_A Hypothetical protein TT 59.0 7 0.00024 35.0 3.6 37 554-592 85-122 (140)
28 3u9l_A 3-oxoacyl-[acyl-carrier 58.5 31 0.0011 34.5 8.6 31 76-106 6-36 (324)
29 3d3w_A L-xylulose reductase; u 58.4 35 0.0012 31.5 8.4 119 76-222 8-138 (244)
30 4dad_A Putative pilus assembly 57.7 57 0.002 27.1 9.0 40 73-112 18-58 (146)
31 2yw3_A 4-hydroxy-2-oxoglutarat 57.5 16 0.00055 34.8 6.1 57 528-592 53-109 (207)
32 3oti_A CALG3; calicheamicin, T 57.1 9.7 0.00033 38.0 4.7 52 72-124 17-74 (398)
33 1y81_A Conserved hypothetical 56.2 12 0.00041 33.5 4.6 36 554-591 84-120 (138)
34 3dii_A Short-chain dehydrogena 55.8 41 0.0014 31.6 8.6 119 76-223 3-136 (247)
35 2nx8_A TRNA-specific adenosine 55.2 19 0.00066 34.0 6.1 64 503-569 39-112 (179)
36 3r6d_A NAD-dependent epimerase 54.1 79 0.0027 28.7 10.0 106 74-224 4-112 (221)
37 3otg_A CALG1; calicheamicin, T 54.0 21 0.00073 35.2 6.5 52 73-124 18-75 (412)
38 3ixq_A Ribose-5-phosphate isom 53.9 11 0.00037 37.4 4.3 38 483-529 3-40 (226)
39 3t4x_A Oxidoreductase, short c 53.9 46 0.0016 31.7 8.6 130 76-224 11-148 (267)
40 1wbh_A KHG/KDPG aldolase; lyas 53.6 7.4 0.00025 37.5 3.0 35 554-591 79-113 (214)
41 2duw_A Putative COA-binding pr 53.5 13 0.00045 33.4 4.5 36 554-591 85-121 (145)
42 1zmt_A Haloalcohol dehalogenas 53.2 37 0.0013 32.1 7.8 35 76-110 2-36 (254)
43 1z3a_A TRNA-specific adenosine 52.7 29 0.00098 32.4 6.8 62 503-568 33-104 (168)
44 3ezl_A Acetoacetyl-COA reducta 52.2 48 0.0016 31.0 8.3 34 73-106 11-44 (256)
45 2pln_A HP1043, response regula 52.1 96 0.0033 25.3 11.5 40 73-112 16-55 (137)
46 3hdv_A Response regulator; PSI 50.6 1E+02 0.0034 25.1 12.1 38 75-112 7-44 (136)
47 3h7a_A Short chain dehydrogena 50.5 45 0.0015 31.6 8.0 34 75-108 7-40 (252)
48 4fzr_A SSFS6; structural genom 48.7 25 0.00086 34.9 6.1 49 76-124 16-70 (398)
49 1mxs_A KDPG aldolase; 2-keto-3 48.4 10 0.00034 37.0 3.0 35 554-591 89-123 (225)
50 1p6o_A Cytosine deaminase; hyd 48.3 34 0.0012 31.6 6.5 85 503-591 38-133 (161)
51 1vq2_A DCMP deaminase, deoxycy 46.6 25 0.00087 33.2 5.5 66 523-592 103-173 (193)
52 3rd5_A Mypaa.01249.C; ssgcid, 45.6 94 0.0032 29.8 9.5 123 76-222 17-141 (291)
53 1xq1_A Putative tropinone redu 45.6 1.4E+02 0.0049 27.8 10.5 38 76-113 15-52 (266)
54 3fok_A Uncharacterized protein 45.5 37 0.0013 35.1 6.8 92 501-592 42-181 (307)
55 1zmo_A Halohydrin dehalogenase 45.3 56 0.0019 30.6 7.7 39 76-114 2-43 (244)
56 2bgk_A Rhizome secoisolaricire 45.3 64 0.0022 30.3 8.1 38 75-112 16-53 (278)
57 3r3s_A Oxidoreductase; structu 45.3 1.5E+02 0.005 28.8 10.9 32 76-107 50-81 (294)
58 1y1p_A ARII, aldehyde reductas 44.2 1.2E+02 0.0043 28.8 10.0 34 75-108 11-44 (342)
59 3sc6_A DTDP-4-dehydrorhamnose 43.5 37 0.0013 32.0 6.1 103 77-224 7-110 (287)
60 2ag5_A DHRS6, dehydrogenase/re 43.0 1.1E+02 0.0036 28.6 9.2 121 76-223 7-136 (246)
61 2zay_A Response regulator rece 42.7 1.4E+02 0.0048 24.5 11.5 94 74-234 7-104 (147)
62 2zat_A Dehydrogenase/reductase 41.8 80 0.0027 29.7 8.1 38 76-113 15-52 (260)
63 1orr_A CDP-tyvelose-2-epimeras 41.7 1.1E+02 0.0039 29.2 9.4 121 76-225 2-130 (347)
64 1wkq_A Guanine deaminase; doma 41.6 22 0.00075 33.2 4.1 77 489-569 19-108 (164)
65 2rjn_A Response regulator rece 41.4 1.6E+02 0.0053 24.7 10.4 37 76-112 8-44 (154)
66 1ae1_A Tropinone reductase-I; 41.2 1E+02 0.0035 29.3 8.9 38 76-113 22-59 (273)
67 3awd_A GOX2181, putative polyo 41.0 1.3E+02 0.0045 27.8 9.4 35 76-110 14-48 (260)
68 2rhc_B Actinorhodin polyketide 40.6 99 0.0034 29.6 8.7 38 76-113 23-60 (277)
69 1fob_A Beta-1,4-galactanase; B 40.6 34 0.0012 34.8 5.6 90 84-178 58-217 (334)
70 1knx_A Probable HPR(Ser) kinas 40.4 21 0.0007 36.8 4.0 45 554-598 74-118 (312)
71 3uw1_A Ribose-5-phosphate isom 40.3 18 0.00063 36.0 3.5 72 481-567 9-80 (239)
72 3imf_A Short chain dehydrogena 40.2 49 0.0017 31.3 6.4 122 76-222 7-145 (257)
73 4iin_A 3-ketoacyl-acyl carrier 40.1 1.2E+02 0.0041 28.8 9.2 32 76-107 30-61 (271)
74 1wa3_A 2-keto-3-deoxy-6-phosph 40.1 24 0.00082 32.5 4.1 14 554-567 95-108 (205)
75 3p19_A BFPVVD8, putative blue 39.8 65 0.0022 30.9 7.3 123 75-223 16-149 (266)
76 3ucx_A Short chain dehydrogena 39.4 1E+02 0.0035 29.2 8.5 39 76-114 12-50 (264)
77 1wwr_A TRNA adenosine deaminas 39.2 59 0.002 30.5 6.7 64 503-569 46-119 (171)
78 2pju_A Propionate catabolism o 39.0 26 0.0009 34.2 4.4 134 85-232 48-189 (225)
79 2a8n_A Cytidine and deoxycytid 39.0 46 0.0016 30.0 5.7 62 503-568 28-99 (144)
80 1iy8_A Levodione reductase; ox 38.8 69 0.0024 30.3 7.2 38 76-113 14-51 (267)
81 3pgx_A Carveol dehydrogenase; 38.4 82 0.0028 30.1 7.7 31 76-106 16-46 (280)
82 2c20_A UDP-glucose 4-epimerase 38.4 1.6E+02 0.0056 28.0 9.9 117 76-224 2-122 (330)
83 4eyg_A Twin-arginine transloca 38.3 24 0.00084 34.1 4.0 72 523-594 27-103 (368)
84 1o5i_A 3-oxoacyl-(acyl carrier 38.3 1E+02 0.0035 29.0 8.3 41 74-114 18-58 (249)
85 3d7l_A LIN1944 protein; APC893 38.0 47 0.0016 29.7 5.7 30 77-107 5-34 (202)
86 3tsc_A Putative oxidoreductase 37.7 1.1E+02 0.0036 29.2 8.4 31 76-106 12-42 (277)
87 2ae2_A Protein (tropinone redu 37.6 1.3E+02 0.0043 28.3 8.8 38 76-113 10-47 (260)
88 4b79_A PA4098, probable short- 37.5 33 0.0011 33.7 4.8 75 76-175 12-86 (242)
89 3pk0_A Short-chain dehydrogena 37.2 1.3E+02 0.0044 28.5 8.9 128 76-222 11-149 (262)
90 3s99_A Basic membrane lipoprot 37.2 2.2E+02 0.0074 29.2 11.1 144 413-591 87-233 (356)
91 4da9_A Short-chain dehydrogena 37.2 82 0.0028 30.4 7.5 32 75-106 29-60 (280)
92 3hzh_A Chemotaxis response reg 37.0 99 0.0034 26.2 7.3 91 73-166 34-135 (157)
93 3ai3_A NADPH-sorbose reductase 37.0 71 0.0024 30.1 7.0 38 76-113 8-45 (263)
94 3v2g_A 3-oxoacyl-[acyl-carrier 37.0 1.4E+02 0.0047 28.7 9.1 31 76-106 32-62 (271)
95 3sx2_A Putative 3-ketoacyl-(ac 36.9 94 0.0032 29.5 7.9 31 76-106 14-44 (278)
96 4es6_A Uroporphyrinogen-III sy 36.6 58 0.002 31.0 6.3 123 83-232 65-205 (254)
97 3a28_C L-2.3-butanediol dehydr 36.6 1.3E+02 0.0044 28.2 8.7 34 76-109 3-36 (258)
98 3is3_A 17BETA-hydroxysteroid d 36.5 1.5E+02 0.0051 28.2 9.2 31 76-106 19-49 (270)
99 3fwz_A Inner membrane protein 36.4 1E+02 0.0035 26.5 7.4 75 73-178 5-82 (140)
100 4fgs_A Probable dehydrogenase 36.4 26 0.00087 35.0 3.9 110 76-213 30-150 (273)
101 3ic5_A Putative saccharopine d 36.3 1.6E+02 0.0056 23.4 11.1 40 74-114 4-44 (118)
102 3uce_A Dehydrogenase; rossmann 36.2 38 0.0013 31.2 4.8 104 76-221 7-118 (223)
103 3t7c_A Carveol dehydrogenase; 35.8 1.3E+02 0.0044 29.2 8.8 31 76-106 29-59 (299)
104 4g81_D Putative hexonate dehyd 35.7 66 0.0023 31.6 6.7 113 76-210 10-130 (255)
105 4iiu_A 3-oxoacyl-[acyl-carrier 35.7 1.5E+02 0.0052 27.9 9.0 32 74-105 25-56 (267)
106 1vl8_A Gluconate 5-dehydrogena 35.6 89 0.003 29.8 7.5 39 75-113 21-59 (267)
107 3guy_A Short-chain dehydrogena 35.6 50 0.0017 30.5 5.5 123 76-222 2-132 (230)
108 2qr3_A Two-component system re 35.5 1.8E+02 0.006 23.6 10.0 97 76-234 4-102 (140)
109 1geg_A Acetoin reductase; SDR 34.5 1.1E+02 0.0036 28.8 7.7 38 76-113 3-40 (256)
110 3s55_A Putative short-chain de 34.3 1.1E+02 0.0037 29.2 7.8 32 76-107 11-42 (281)
111 2qxy_A Response regulator; reg 34.2 1.9E+02 0.0065 23.6 9.5 37 76-112 5-41 (142)
112 2qq5_A DHRS1, dehydrogenase/re 34.1 97 0.0033 29.1 7.4 37 76-112 6-42 (260)
113 2ew8_A (S)-1-phenylethanol deh 34.0 1.1E+02 0.0038 28.6 7.7 34 76-109 8-41 (249)
114 3l8h_A Putative haloacid dehal 33.8 1.8E+02 0.0063 25.1 8.7 23 86-108 30-53 (179)
115 3sc4_A Short chain dehydrogena 33.8 79 0.0027 30.5 6.8 32 76-107 10-41 (285)
116 4fn4_A Short chain dehydrogena 33.6 65 0.0022 31.6 6.2 39 76-114 8-46 (254)
117 3slg_A PBGP3 protein; structur 33.6 97 0.0033 30.4 7.6 121 74-225 23-146 (372)
118 2nm0_A Probable 3-oxacyl-(acyl 33.6 34 0.0011 32.7 4.1 33 75-107 21-53 (253)
119 2b3j_A TRNA adenosine deaminas 33.4 89 0.003 28.6 6.8 62 503-568 31-102 (159)
120 3edm_A Short chain dehydrogena 33.4 88 0.003 29.6 7.0 30 76-105 9-38 (259)
121 1ja9_A 4HNR, 1,3,6,8-tetrahydr 33.3 73 0.0025 29.7 6.3 33 75-107 21-53 (274)
122 3pxx_A Carveol dehydrogenase; 33.3 1.3E+02 0.0044 28.4 8.1 31 76-106 11-41 (287)
123 3oec_A Carveol dehydrogenase ( 33.3 94 0.0032 30.6 7.4 31 76-106 47-77 (317)
124 1yxm_A Pecra, peroxisomal tran 33.3 1.8E+02 0.0061 27.8 9.2 38 76-113 19-56 (303)
125 3uve_A Carveol dehydrogenase ( 33.2 1.3E+02 0.0046 28.6 8.3 31 76-106 12-42 (286)
126 2q2v_A Beta-D-hydroxybutyrate 32.9 96 0.0033 29.1 7.1 31 76-106 5-35 (255)
127 3qvo_A NMRA family protein; st 32.9 2.2E+02 0.0077 26.1 9.6 108 74-226 22-131 (236)
128 2csu_A 457AA long hypothetical 32.9 31 0.0011 36.7 4.1 39 553-591 78-125 (457)
129 3eod_A Protein HNR; response r 32.6 1.9E+02 0.0066 23.1 11.2 93 75-234 7-101 (130)
130 2uvd_A 3-oxoacyl-(acyl-carrier 32.5 1E+02 0.0035 28.7 7.2 37 76-112 5-42 (246)
131 2j9l_A Chloride channel protei 32.3 27 0.00093 30.6 3.0 51 330-380 125-175 (185)
132 4imr_A 3-oxoacyl-(acyl-carrier 32.2 1.1E+02 0.0037 29.5 7.5 32 76-107 34-65 (275)
133 3u5t_A 3-oxoacyl-[acyl-carrier 32.0 1.3E+02 0.0043 28.9 7.9 30 76-105 28-57 (267)
134 3e2v_A 3'-5'-exonuclease; stru 31.9 18 0.00062 38.5 2.1 34 554-587 42-76 (401)
135 1usg_A Leucine-specific bindin 31.9 46 0.0016 31.7 4.8 72 523-594 23-100 (346)
136 4amg_A Snogd; transferase, pol 31.7 22 0.00075 35.0 2.5 49 76-124 23-76 (400)
137 4dmm_A 3-oxoacyl-[acyl-carrier 31.6 1E+02 0.0035 29.5 7.2 32 76-107 29-60 (269)
138 3ia7_A CALG4; glycosysltransfe 31.4 62 0.0021 31.6 5.7 49 76-124 5-59 (402)
139 2x4g_A Nucleoside-diphosphate- 31.3 79 0.0027 30.4 6.4 116 75-224 13-130 (342)
140 2jah_A Clavulanic acid dehydro 31.3 1E+02 0.0035 28.9 7.0 38 76-113 8-45 (247)
141 3cqj_A L-ribulose-5-phosphate 31.1 83 0.0028 30.0 6.4 40 554-593 112-166 (295)
142 3asu_A Short-chain dehydrogena 31.0 3.3E+02 0.011 25.4 11.8 118 77-222 2-136 (248)
143 3dmy_A Protein FDRA; predicted 31.0 28 0.00095 37.9 3.3 64 524-591 25-90 (480)
144 1eye_A DHPS 1, dihydropteroate 30.8 73 0.0025 32.1 6.2 54 539-596 80-133 (280)
145 3neh_A Renal dipeptidase famil 30.7 66 0.0022 33.2 5.9 146 77-247 101-302 (318)
146 1qkk_A DCTD, C4-dicarboxylate 30.7 2.3E+02 0.008 23.5 10.7 38 76-113 4-41 (155)
147 1aj0_A DHPS, dihydropteroate s 30.7 59 0.002 32.9 5.5 53 539-596 90-142 (282)
148 1g0o_A Trihydroxynaphthalene r 30.6 3E+02 0.01 26.1 10.3 32 76-107 30-61 (283)
149 3ksu_A 3-oxoacyl-acyl carrier 30.6 1.5E+02 0.005 28.2 8.1 30 76-105 12-41 (262)
150 3n0w_A ABC branched chain amin 30.6 46 0.0016 32.7 4.6 72 523-594 28-104 (379)
151 2fp4_A Succinyl-COA ligase [GD 30.5 35 0.0012 34.5 3.8 38 554-591 86-127 (305)
152 1fjh_A 3alpha-hydroxysteroid d 30.5 16 0.00053 34.2 1.2 32 76-107 2-33 (257)
153 3orf_A Dihydropteridine reduct 30.5 21 0.0007 33.8 2.0 34 74-107 21-54 (251)
154 1db3_A GDP-mannose 4,6-dehydra 30.4 1.3E+02 0.0045 29.3 7.8 129 76-224 2-136 (372)
155 1zcz_A Bifunctional purine bio 30.3 1E+02 0.0036 33.6 7.5 109 472-594 199-313 (464)
156 3ged_A Short-chain dehydrogena 30.2 77 0.0026 31.0 6.1 121 76-220 3-133 (247)
157 2b3z_A Riboflavin biosynthesis 30.1 57 0.002 33.8 5.4 99 489-591 18-134 (373)
158 3nav_A Tryptophan synthase alp 30.1 39 0.0013 33.9 4.0 36 556-591 118-154 (271)
159 2g6v_A Riboflavin biosynthesis 29.9 54 0.0019 34.5 5.3 99 489-591 34-150 (402)
160 3ppi_A 3-hydroxyacyl-COA dehyd 29.9 81 0.0028 30.0 6.1 39 76-114 31-69 (281)
161 3p9z_A Uroporphyrinogen III co 29.8 31 0.0011 32.8 3.1 106 98-231 66-180 (229)
162 3i09_A Periplasmic branched-ch 29.6 43 0.0015 32.7 4.2 73 522-594 25-102 (375)
163 3op7_A Aminotransferase class 29.6 41 0.0014 32.8 4.0 40 554-593 145-193 (375)
164 1ek6_A UDP-galactose 4-epimera 29.2 3.7E+02 0.013 25.8 10.8 30 76-105 3-32 (348)
165 4egf_A L-xylulose reductase; s 29.1 85 0.0029 29.9 6.1 39 76-114 21-59 (266)
166 1rrv_A Glycosyltransferase GTF 28.8 1.2E+02 0.0039 30.5 7.3 41 84-124 13-55 (416)
167 4fs3_A Enoyl-[acyl-carrier-pro 28.7 68 0.0023 30.6 5.4 37 76-112 7-45 (256)
168 3tl3_A Short-chain type dehydr 28.5 50 0.0017 31.1 4.3 33 76-108 10-42 (257)
169 2pnf_A 3-oxoacyl-[acyl-carrier 28.3 1.3E+02 0.0044 27.6 7.0 38 76-113 8-45 (248)
170 1ece_A Endocellulase E1; glyco 28.2 48 0.0016 32.8 4.3 40 554-593 48-114 (358)
171 3rhg_A Putative phophotriester 28.1 42 0.0014 34.8 4.0 40 556-595 81-125 (365)
172 3uf0_A Short-chain dehydrogena 28.1 2E+02 0.007 27.5 8.7 33 75-107 31-63 (273)
173 3grk_A Enoyl-(acyl-carrier-pro 28.0 3.2E+02 0.011 26.3 10.2 34 76-109 32-67 (293)
174 3v2h_A D-beta-hydroxybutyrate 28.0 3.1E+02 0.011 26.2 10.0 127 76-222 26-165 (281)
175 3d8t_A Uroporphyrinogen-III sy 27.7 80 0.0027 30.8 5.7 120 85-231 93-227 (286)
176 3f4w_A Putative hexulose 6 pho 27.7 43 0.0015 30.9 3.6 14 555-568 95-108 (211)
177 4id9_A Short-chain dehydrogena 27.7 65 0.0022 31.2 5.1 113 73-225 17-131 (347)
178 1sb8_A WBPP; epimerase, 4-epim 27.7 3.5E+02 0.012 26.2 10.4 126 75-225 27-158 (352)
179 1t2a_A GDP-mannose 4,6 dehydra 27.6 2.4E+02 0.0083 27.6 9.3 33 74-106 23-55 (375)
180 2yjn_A ERYCIII, glycosyltransf 27.6 82 0.0028 31.9 6.0 50 75-124 20-75 (441)
181 3kvo_A Hydroxysteroid dehydrog 27.6 1.7E+02 0.0058 29.5 8.3 32 76-107 46-77 (346)
182 1vff_A Beta-glucosidase; glyco 27.5 22 0.00074 37.9 1.7 51 541-593 43-108 (423)
183 4hp8_A 2-deoxy-D-gluconate 3-d 27.5 64 0.0022 31.8 5.0 47 76-122 10-61 (247)
184 1ng7_A Poliovirus 3A-N, genome 27.3 16 0.00055 29.6 0.5 18 573-590 28-45 (60)
185 1uzm_A 3-oxoacyl-[acyl-carrier 27.3 84 0.0029 29.5 5.6 117 76-224 16-144 (247)
186 2pq6_A UDP-glucuronosyl/UDP-gl 27.2 1.2E+02 0.004 31.8 7.2 95 77-176 11-127 (482)
187 3mc3_A DSRE/DSRF-like family p 27.1 36 0.0012 30.0 2.9 56 153-217 77-133 (134)
188 3r1i_A Short-chain type dehydr 27.0 1.5E+02 0.0052 28.4 7.5 33 76-108 33-65 (276)
189 2isb_A Fumarase, FUM-1; NP_069 26.8 52 0.0018 32.1 4.0 34 559-594 107-140 (192)
190 3gtx_A Organophosphorus hydrol 26.6 54 0.0019 33.5 4.5 41 555-595 68-112 (339)
191 2hxv_A Diaminohydroxyphosphori 26.4 87 0.003 32.3 6.0 83 503-591 39-136 (360)
192 3ipw_A Hydrolase TATD family p 26.3 35 0.0012 35.1 3.0 34 554-587 56-90 (325)
193 2fwm_X 2,3-dihydro-2,3-dihydro 26.2 1.4E+02 0.0049 27.8 7.0 32 76-107 8-39 (250)
194 3osu_A 3-oxoacyl-[acyl-carrier 26.2 1.6E+02 0.0056 27.4 7.4 31 76-106 5-35 (246)
195 3ipc_A ABC transporter, substr 25.9 41 0.0014 32.5 3.2 72 523-594 23-100 (356)
196 3td9_A Branched chain amino ac 25.8 46 0.0016 32.3 3.6 71 524-595 38-113 (366)
197 3kto_A Response regulator rece 25.8 2.7E+02 0.0092 22.7 10.2 94 76-234 7-102 (136)
198 2vc7_A Aryldialkylphosphatase; 25.8 72 0.0025 30.8 5.0 38 556-593 53-93 (314)
199 3vup_A Beta-1,4-mannanase; TIM 25.8 46 0.0016 31.1 3.4 17 577-593 93-109 (351)
200 3hut_A Putative branched-chain 25.6 29 0.00098 33.6 2.1 72 523-594 25-103 (358)
201 1vl0_A DTDP-4-dehydrorhamnose 25.5 1.1E+02 0.0039 28.7 6.2 104 75-224 12-117 (292)
202 2gmw_A D,D-heptose 1,7-bisphos 25.2 1.4E+02 0.0048 27.2 6.6 33 86-118 53-105 (211)
203 3rih_A Short chain dehydrogena 25.2 1.4E+02 0.0048 29.2 7.0 128 76-222 42-180 (293)
204 3lyl_A 3-oxoacyl-(acyl-carrier 25.1 76 0.0026 29.4 4.8 38 76-113 6-43 (247)
205 3tha_A Tryptophan synthase alp 25.1 52 0.0018 32.9 3.9 38 555-592 108-146 (252)
206 2j78_A Beta-glucosidase A; fam 25.0 28 0.00097 37.6 2.1 50 542-593 75-140 (468)
207 1ug6_A Beta-glycosidase; gluco 24.9 28 0.00096 37.1 2.0 50 542-593 51-116 (431)
208 1wcw_A Uroporphyrinogen III sy 24.9 1.4E+02 0.0048 28.3 6.7 120 85-231 68-202 (261)
209 3oig_A Enoyl-[acyl-carrier-pro 24.8 64 0.0022 30.4 4.3 32 76-107 8-41 (266)
210 2i5g_A Amidohydrolase; NYSGXRC 24.8 2.5E+02 0.0087 28.7 9.0 92 150-247 191-313 (325)
211 3k2g_A Resiniferatoxin-binding 24.7 73 0.0025 32.9 5.1 41 555-595 91-135 (364)
212 3eag_A UDP-N-acetylmuramate:L- 24.7 1.2E+02 0.004 30.3 6.4 46 75-120 4-54 (326)
213 3i4j_A Aminotransferase, class 24.7 59 0.002 32.7 4.2 23 570-592 203-230 (430)
214 1vb5_A Translation initiation 24.5 1.1E+02 0.0038 30.5 6.2 101 77-222 111-221 (276)
215 2nu8_A Succinyl-COA ligase [AD 24.3 55 0.0019 32.6 3.9 51 538-591 66-119 (288)
216 3grp_A 3-oxoacyl-(acyl carrier 24.3 41 0.0014 32.3 2.9 126 76-224 28-164 (266)
217 3vtz_A Glucose 1-dehydrogenase 24.2 47 0.0016 31.9 3.3 34 74-107 13-46 (269)
218 4ehi_A Bifunctional purine bio 24.1 1.4E+02 0.0048 33.2 7.2 92 472-573 254-351 (534)
219 3ruf_A WBGU; rossmann fold, UD 23.5 3.6E+02 0.012 25.9 9.5 30 75-106 25-56 (351)
220 3vnd_A TSA, tryptophan synthas 23.5 55 0.0019 32.7 3.7 19 555-573 140-160 (267)
221 2hq1_A Glucose/ribitol dehydro 23.4 2.2E+02 0.0074 26.0 7.6 31 76-106 6-36 (247)
222 2v82_A 2-dehydro-3-deoxy-6-pho 23.3 81 0.0028 29.1 4.7 34 554-590 71-104 (212)
223 2yv1_A Succinyl-COA ligase [AD 23.3 59 0.002 32.6 3.9 39 553-591 84-125 (294)
224 1yx1_A Hypothetical protein PA 23.2 37 0.0013 32.1 2.3 18 555-572 117-134 (264)
225 3dod_A Adenosylmethionine-8-am 23.1 59 0.002 33.1 4.0 39 554-592 198-250 (448)
226 3re1_A Uroporphyrinogen-III sy 23.1 68 0.0023 31.1 4.2 41 84-124 74-120 (269)
227 3rku_A Oxidoreductase YMR226C; 23.0 1.9E+02 0.0065 28.1 7.4 128 76-222 34-177 (287)
228 3rsc_A CALG2; TDP, enediyne, s 22.9 1.3E+02 0.0043 29.8 6.2 51 74-124 19-75 (415)
229 2y1h_A Putative deoxyribonucle 22.8 82 0.0028 29.9 4.7 42 554-595 24-67 (272)
230 3ib6_A Uncharacterized protein 22.8 2E+02 0.0069 25.5 7.1 34 85-118 36-77 (189)
231 1x1t_A D(-)-3-hydroxybutyrate 22.8 1.1E+02 0.0038 28.7 5.5 32 76-107 5-36 (260)
232 3e8x_A Putative NAD-dependent 22.7 4.3E+02 0.015 23.9 12.0 106 75-221 21-132 (236)
233 3rqi_A Response regulator prot 22.7 3.8E+02 0.013 23.3 9.8 37 76-112 8-44 (184)
234 2c07_A 3-oxoacyl-(acyl-carrier 22.6 2.6E+02 0.0088 26.6 8.2 35 76-110 45-79 (285)
235 3i45_A Twin-arginine transloca 22.6 53 0.0018 32.3 3.4 72 523-594 25-104 (387)
236 4hb7_A Dihydropteroate synthas 22.6 1.5E+02 0.0052 30.0 6.7 54 539-596 81-134 (270)
237 3iix_A Biotin synthetase, puta 22.6 1E+02 0.0036 30.4 5.5 48 74-121 100-157 (348)
238 3fvv_A Uncharacterized protein 22.5 49 0.0017 29.7 2.9 82 85-173 94-184 (232)
239 3fq8_A Glutamate-1-semialdehyd 22.5 70 0.0024 32.1 4.3 24 569-592 210-238 (427)
240 1xq6_A Unknown protein; struct 22.5 2.8E+02 0.0097 24.9 8.1 41 74-114 3-45 (253)
241 2bd0_A Sepiapterin reductase; 22.5 3.1E+02 0.01 25.0 8.4 38 76-113 3-47 (244)
242 3cxt_A Dehydrogenase with diff 22.4 2.7E+02 0.0092 27.0 8.4 38 76-113 35-72 (291)
243 1oi7_A Succinyl-COA synthetase 22.3 63 0.0022 32.3 3.9 39 553-591 78-119 (288)
244 3snk_A Response regulator CHEY 22.3 3.1E+02 0.01 22.2 7.6 33 74-106 13-46 (135)
245 3hdg_A Uncharacterized protein 22.1 3.1E+02 0.011 22.1 10.0 92 76-234 8-101 (137)
246 2yv2_A Succinyl-COA synthetase 22.0 65 0.0022 32.3 3.9 40 552-591 84-126 (297)
247 2p91_A Enoyl-[acyl-carrier-pro 21.9 5.1E+02 0.017 24.5 10.2 32 76-107 22-55 (285)
248 3ngf_A AP endonuclease, family 21.9 1E+02 0.0035 29.1 5.1 42 554-596 97-153 (269)
249 1jr2_A Uroporphyrinogen-III sy 21.7 1.5E+02 0.005 28.9 6.3 21 99-119 114-135 (286)
250 2ob3_A Parathion hydrolase; me 21.7 80 0.0027 31.7 4.5 40 556-595 53-96 (330)
251 1vk9_A Conserved hypothetical 21.6 1.6E+02 0.0053 27.8 6.1 91 332-439 18-108 (151)
252 4gpa_A Glutamate receptor 4; P 21.6 2.8E+02 0.0097 26.6 8.3 71 522-594 19-100 (389)
253 3bdk_A D-mannonate dehydratase 21.4 56 0.0019 34.4 3.4 17 577-593 203-219 (386)
254 1ujp_A Tryptophan synthase alp 21.3 72 0.0025 31.8 4.1 48 545-592 101-149 (271)
255 3zzm_A Bifunctional purine bio 21.2 1.6E+02 0.0055 32.6 7.0 112 471-593 246-363 (523)
256 3l7o_A Ribose-5-phosphate isom 21.0 90 0.0031 30.7 4.6 33 490-530 7-39 (225)
257 2o0r_A RV0858C (N-succinyldiam 20.9 75 0.0026 31.6 4.1 39 554-592 151-198 (411)
258 3dqp_A Oxidoreductase YLBE; al 20.8 1E+02 0.0035 27.9 4.7 48 165-224 61-110 (219)
259 3ay3_A NAD-dependent epimerase 20.7 2.1E+02 0.007 26.7 6.9 110 76-224 3-114 (267)
260 3llv_A Exopolyphosphatase-rela 20.7 3.8E+02 0.013 22.5 10.5 107 75-231 6-115 (141)
261 3icc_A Putative 3-oxoacyl-(acy 20.7 4.9E+02 0.017 23.8 10.0 30 76-105 8-37 (255)
262 2rbg_A Putative uncharacterize 20.4 82 0.0028 28.7 3.7 41 157-201 25-65 (126)
263 4evq_A Putative ABC transporte 20.4 36 0.0012 33.0 1.6 72 523-594 37-113 (375)
264 2ydy_A Methionine adenosyltran 20.4 2E+02 0.0069 27.3 6.9 31 76-106 3-33 (315)
265 1qsg_A Enoyl-[acyl-carrier-pro 20.2 3.5E+02 0.012 25.4 8.4 32 76-107 10-43 (265)
266 3g8q_A Predicted RNA-binding p 20.2 1.1E+02 0.0038 31.1 5.0 92 491-592 14-105 (278)
267 2fpr_A Histidine biosynthesis 20.0 4.5E+02 0.016 23.2 9.7 22 86-107 45-67 (176)
No 1
>3zzm_A Bifunctional purine biosynthesis protein PURH; transferase, hydrolase; HET: JLN; 2.20A {Mycobacterium tuberculosis} PDB: 4a1o_A*
Probab=100.00 E-value=1.4e-212 Score=1687.65 Aligned_cols=508 Identities=45% Similarity=0.736 Sum_probs=489.6
Q ss_pred CCcEEEEEecCcccHHHHHHHHHHcCcEEEEechhHHHHHHCCCeeEEecccCCCCCCCCCcccccccccccccccCCCC
Q 007518 74 ANKQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLENAGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQ 153 (600)
Q Consensus 74 ~i~rALISVsDK~glv~~Ak~L~~lGfeIiATgGTAk~L~e~GI~v~~VskiTGfPEildGRVKTLHPkIhGGILarr~~ 153 (600)
+|++|||||+||+++++||+.|.++||+|+||+||+++|+++||+|+.|+|+||||||||||||||||+||||||+||++
T Consensus 9 ~i~~aLISVsDK~glvelAk~L~~lGfeI~ATgGTak~L~e~GI~v~~V~~vTgfPEil~GRVKTLHP~ihgGiLa~r~~ 88 (523)
T 3zzm_A 9 PIRRALISVYDKTGLVDLAQGLSAAGVEIISTGSTAKTIADTGIPVTPVEQLTGFPEVLDGRVKTLHPRVHAGLLADLRK 88 (523)
T ss_dssp CCCEEEEEESSCTTHHHHHHHHHHTTCEEEECHHHHHHHHTTTCCCEEHHHHHSCCCCTTTTSSSCSHHHHHHHHCCTTS
T ss_pred cccEEEEEEeccccHHHHHHHHHHCCCEEEEcchHHHHHHHcCCceeeccccCCCchhhCCccccCCchhhhhhccCCCC
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhHHHHHHcCCCceeEEEEeccCcHHhhhcCCCCChhhhhhccccchHHHHHHHHHCCCCEEEEeCCCCHHHHHHHHhC
Q 007518 154 KHHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGPAMIRAAAKNHKDVLVVVGSEDYPALLEFLKG 233 (600)
Q Consensus 154 ~~h~~~l~~~~I~~IDlVVVNLYPFe~tv~~~~~~~~ee~IEnIDIGGpsmiRAAAKN~~~V~Vv~dP~DY~~vl~eL~~ 233 (600)
++|+++|++|||+||||||||||||++||++ +++++|+|||||||||||||||||||++|+|||||+||+.++++|++
T Consensus 89 ~~h~~~l~~~~i~~iDlVvvNLYPF~~tv~~--~~~~~~~iE~IDIGGpsmlRaAAKN~~~V~vv~dp~dY~~vl~~l~~ 166 (523)
T 3zzm_A 89 SEHAAALEQLGIEAFELVVVNLYPFSQTVES--GASVDDCVEQIDIGGPAMVRAAAKNHPSAAVVTDPLGYHGVLAALRA 166 (523)
T ss_dssp HHHHHHHHHHTCCCCSEEEEECCCHHHHHHT--TCCHHHHHHTCCSHHHHHHHHHHHTTTTCEEECCGGGHHHHHHHHHT
T ss_pred HHHHHHHHHCCCCceeEEEEeCCChHHHHhc--CCCHHHHHHhcccCcHHHHHHHHhcCCCEEEECCHHHHHHHHHHHHc
Confidence 9999999999999999999999999999997 89999999999999999999999999999999999999999999998
Q ss_pred CCCCHHHHHHHHHHHHHHHhhhhHHHHHHHHhhhcc---cCCCCCceeeccccccccccCCCcccccccccccchhhhcc
Q 007518 234 NQDDQQFRRKLAWKAFQHVASYDSAVSEWLWKQIAE---EDKFPPSFTVPLELKSSLRYGENPHQKAAFYVDKSLAEVNA 310 (600)
Q Consensus 234 G~~s~~~R~~LA~kAF~~TA~YD~aIa~yl~~~~~~---~~~~p~~~~~~~~~~~~LRYGENPHQ~Aa~Y~~~~~~~~~~ 310 (600)
|++|+++|++||.|||+|||+||++|++||+++..+ ...||+.+++++++.|+|||||||||+|+||.+.. ..
T Consensus 167 g~~~~~~R~~lA~kAF~~ta~YD~aIa~yl~~~~~~~~~~~~~p~~~~~~~~~~~~LRYGENPHQ~aa~Y~~~~----~~ 242 (523)
T 3zzm_A 167 GGFTLAERKRLASLAFQHIAEYDIAVASWMQQTLAPEHPVAAFPQWFGRSWRRVAMLRYGENPHQQAALYGDPT----AW 242 (523)
T ss_dssp TSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCSSCCSSCSEEEEEEEEEEECSCSSSTTSCEEEEECTT----SC
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccchheeeccccccccCCCCCcccchhhhccCC----cc
Confidence 999999999999999999999999999999875432 11489999999999999999999999999996531 12
Q ss_pred CCccccccccCCCCCCchhhcHHHHHHHHHhcCCCeEEEEccCCcccccc-cCCHHHHHHHHHhcCCCCcCCCEEEEccc
Q 007518 311 GGIATAIQHHGKEMSYNNYLDADAAWNCVSEFKNPTCVIVKHTNPCGVAS-RDDILEAYKLAVKADPVSAFGGIVAFNVE 389 (600)
Q Consensus 311 ~~~~~~~ql~GKeLSYNN~lD~daA~~lv~ef~~pa~vivKH~nPCGvA~-~~~l~eAy~~A~~~DpvSaFGGIVA~Nr~ 389 (600)
.++.+++||||||||||||+|+|+||+||+||++|+||||||+||||+|+ ++++.+||++||+|||+||||||||+||+
T Consensus 243 ~~~~~~~qL~GKeLSYnNl~DadaA~~lv~ef~~Pa~aivKH~nPCGvA~~g~~l~~Ay~~A~~~Dp~SaFGgiiA~N~~ 322 (523)
T 3zzm_A 243 PGLAQAEQLHGKDMSYNNFTDADAAWRAAFDHEQTCVAIIKHANPCGIAISSVSVADAHRKAHECDPLSAYGGVIAANTE 322 (523)
T ss_dssp CCGGGCEEEESSCCCHHHHHHHHHHHHHHTTSSSEEEEEEETTEEEEEEEESSCHHHHHHHHHTTSHHHHTTEEEEESSC
T ss_pred cCcccceeccCCCCCcccHHhHHHHHHHHHhcCCCeEEEEecCCcceeecCCCCHHHHHHHHHhcCCccccCCEEEEcCc
Confidence 46889999999999999999999999999999999999999999999999 99999999999999999999999999999
Q ss_pred cCHHHHHHHhcccCCCCCccccEEEEEEcCCCCHHHHHHHhhccCCceEEEecCCCCCCceEEEEceeEEEecCCCCCC-
Q 007518 390 VDEALAKELREYRSPTDGETRMFYEIVVAPSYTEEGLEILRGKSKNLRILETKKNKKGKLSLRQVGGGWLAQDSDDLTP- 468 (600)
Q Consensus 390 vD~~tA~~i~~~~~~~~~~~~~F~EvIIAP~f~~eAleiL~~K~KnlRlL~~~~~~~~~~~~r~v~GG~LvQ~~D~~~~- 468 (600)
||.+||++|+++ |+||||||+|++||||||++| ||+|||+++....+.+++|+|.||+|+|++|...+
T Consensus 323 vD~~tA~~i~~~----------f~EvviAP~~~~eAleiL~~K-KnlR~l~~~~~~~~~~e~r~v~GG~LvQ~~D~~~~~ 391 (523)
T 3zzm_A 323 VSVEMAEYVSTI----------FTEVIVAPGYAPGALDVLARK-KNIRVLVAAEPLAGGSELRPISGGLLIQQSDQLDAH 391 (523)
T ss_dssp BCHHHHHHHTTS----------CEEEEEESCBCTTHHHHHTTS-SSCEEEECCCCCSSCEEEEEETTEEEEEECCCSCSG
T ss_pred cCHHHHHHHhhh----------EEEEEEcCCCCHHHHHHHHhC-CCeEEEEecCCCCCCeEEEEEeeeEEEECCCCcccc
Confidence 999999999999 999999999999999999999 99999999754345789999999999999998876
Q ss_pred --CcccceeecCCCCCHHHHHHHHHHHHHHhhhcceEEEEEeCCeEEEecCCCCcHHHHHHHHHHHcCCccCceEEeecc
Q 007518 469 --EDIQFKVVSEKKPQESELHDAEFAWLCVKHVKSNAIVIAKNNCMLGMGSGQPNRRESLRIAMKKAGDEVKGAALASDA 546 (600)
Q Consensus 469 --~~~~~~vVT~~~Pt~~e~~dL~FAwkvvKhvKSNAIV~ak~~~tvGiGaGQ~sRVds~~iA~~kA~~~~~GavlASDA 546 (600)
++.+|+|||+++||++||+||+|||++|||||||||||+|||||||||+||||||||+|+|++||+++++|+||||||
T Consensus 392 ~~~~~~~~vvT~~~pt~~e~~dL~fAw~v~K~vkSNAIv~akdg~tvGiGaGQ~sRV~s~r~A~~kAg~~~~G~vlaSDA 471 (523)
T 3zzm_A 392 GDNPANWTLATGSPADPATLTDLVFAWRACRAVKSNAIVIAADGATVGVGMGQVNRVDAARLAVERGGERVRGAVAASDA 471 (523)
T ss_dssp GGSGGGCEEEESSCCCHHHHHHHHHHHHHGGGSCSSCEEEEETTEEEEEECSCSSHHHHHHHHHHHHGGGCTTCEEEESS
T ss_pred cCCHHHCeeccCCCcCHHHHHHHHHHHHHHHhccCceEEEEECCeEEEECCCCcchHHHHHHHHHHhccccCCeEEEecc
Confidence 678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCccchHHHHHHCCCeEEecCCCCCCchHHHHHHHhcCcEEEecCCccCCC
Q 007518 547 FFPFAWKDAVEEACENGIGVIAEPGGSIRDGDAIDCCNKYGVALLLTSVRHFKH 600 (600)
Q Consensus 547 FFPF~~~D~ve~Aa~aGi~aIIQPGGSiRD~evI~aa~e~giaMvfTg~RHFrH 600 (600)
||||+ |+||.|+++||+|||||||||||+|||++||||||+|||||+|||||
T Consensus 472 FFPF~--D~ve~aa~aGv~aIiQPGGSiRD~evI~aane~giaMvfTG~RhF~H 523 (523)
T 3zzm_A 472 FFPFP--DGLETLAAAGVTAVVHPGGSVRDEEVTEAAAKAGVTLYLTGARHFAH 523 (523)
T ss_dssp CCSSH--HHHHHHHHTTCCEEEECCCCTTHHHHHHHHHHHTCEEEECSCCCCCC
T ss_pred CcCCC--ccHHHHHHcCCEEEECCCCCCCcHHHHHHHHHcCCeEEEcCccCcCC
Confidence 99999 99999999999999999999999999999999999999999999999
No 2
>4ehi_A Bifunctional purine biosynthesis protein PURH; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE BTB; 2.28A {Campylobacter jejuni subsp}
Probab=100.00 E-value=2.1e-210 Score=1672.05 Aligned_cols=503 Identities=41% Similarity=0.699 Sum_probs=447.7
Q ss_pred CCcEEEEEecCcccHHHHHHHHHHcCcEEEEechhHHHHHHCCCeeEEecccCCCCCCCCCcccccccccccccccCCCC
Q 007518 74 ANKQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLENAGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQ 153 (600)
Q Consensus 74 ~i~rALISVsDK~glv~~Ak~L~~lGfeIiATgGTAk~L~e~GI~v~~VskiTGfPEildGRVKTLHPkIhGGILarr~~ 153 (600)
.|+||||||+||+++++||+.|.++||+|+||+||+++|+++||+|+.|+|+||||||||||||||||+||||||+||++
T Consensus 23 ~i~raLISV~DK~glv~~Ak~L~~lGfeI~ATgGTak~L~e~GI~v~~V~kvTgfPEil~GRVKTLHP~IhgGiLa~r~~ 102 (534)
T 4ehi_A 23 NAMRALLSVSDKEGIVEFGKELENLGFEILSTGGTFKLLKENGIKVIEVSDFTKSPELFEGRVKTLHPKIHGGILHKRSD 102 (534)
T ss_dssp TCCEEEEEESSCTTHHHHHHHHHHTTCEEEECHHHHHHHHHTTCCCEECBCCC---------------------------
T ss_pred CCcEEEEEEcccccHHHHHHHHHHCCCEEEEccHHHHHHHHCCCceeehhhccCCchhhCCccccCChhhhhhhccCCCC
Confidence 68899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhHHHHHHcCCCceeEEEEeccCcHHhhhcCCCCChhhhhhccccchHHHHHHHHHCCCCEEEEeCCCCHHHHHHHHhC
Q 007518 154 KHHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGPAMIRAAAKNHKDVLVVVGSEDYPALLEFLKG 233 (600)
Q Consensus 154 ~~h~~~l~~~~I~~IDlVVVNLYPFe~tv~~~~~~~~ee~IEnIDIGGpsmiRAAAKN~~~V~Vv~dP~DY~~vl~eL~~ 233 (600)
++|+++|++|||+||||||||||||++||++ +++++|+|||||||||||||||||||++|+|||||+||+.++++|+.
T Consensus 103 ~~h~~~l~~~~I~~iDlVvvNLYPF~~tv~~--~~~~~~~iE~IDIGGpsmlRAAAKN~~~V~Vv~dp~dY~~vl~~l~~ 180 (534)
T 4ehi_A 103 ENHIKQAKENEILGIDLVCVNLYPFKKTTIM--SDDFDEIIENIDIGGPAMIRSAAKNYKDVMVLCDPLDYEKVIETLKK 180 (534)
T ss_dssp -----------CEEESEEEEECCCHHHHHHH--CCCHHHHHHTSCSSHHHHHHHHHHTTTTCEEECCGGGHHHHHHHHHT
T ss_pred HHHHHHHHHcCCCceeEEEEeCcChHHHHhc--CCCHHHHHHHhhcCcHHHHHHHHHcCCCEEEECCHHHHHHHHHHHHc
Confidence 9999999999999999999999999999998 89999999999999999999999999999999999999999999998
Q ss_pred CCCCHHHHHHHHHHHHHHHhhhhHHHHHHHHhhhcccCCCCCceeeccccccccccCCCcccccccccccchhhhccCCc
Q 007518 234 NQDDQQFRRKLAWKAFQHVASYDSAVSEWLWKQIAEEDKFPPSFTVPLELKSSLRYGENPHQKAAFYVDKSLAEVNAGGI 313 (600)
Q Consensus 234 G~~s~~~R~~LA~kAF~~TA~YD~aIa~yl~~~~~~~~~~p~~~~~~~~~~~~LRYGENPHQ~Aa~Y~~~~~~~~~~~~~ 313 (600)
|++|+++|++||.|||+|||+||++|++||+++..+ .||+.+++++++.++|||||||||+|+||.+. .+++
T Consensus 181 g~~~~~~R~~lA~kAF~~ta~YD~aI~~~l~~~~~~--~~p~~~~~~~~~~~~LRYGENPHQ~aA~Y~~~------~~~~ 252 (534)
T 4ehi_A 181 GQNDENFRLNLMIKAYEHTANYDAYIANYMNERFNG--GFGASKFIVGQKVFDTKYGENPHQKGALYEFD------AFFS 252 (534)
T ss_dssp TCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHST--TCCSEEEEEEEEEEEESCSSSTTSCEEEEESS------SHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc--ccchheeecceeccccCCCCCCCccceEEecC------CCCc
Confidence 999999999999999999999999999999875432 49999999999999999999999999999653 1256
Q ss_pred cccccccCCCCCCchhhcHHHHHHHHHhcCC-CeEEEEccCCcccccccCCHHHHHHHHHhcCCCCcCCCEEEEccccCH
Q 007518 314 ATAIQHHGKEMSYNNYLDADAAWNCVSEFKN-PTCVIVKHTNPCGVASRDDILEAYKLAVKADPVSAFGGIVAFNVEVDE 392 (600)
Q Consensus 314 ~~~~ql~GKeLSYNN~lD~daA~~lv~ef~~-pa~vivKH~nPCGvA~~~~l~eAy~~A~~~DpvSaFGGIVA~Nr~vD~ 392 (600)
.+++|||| |||||||+|+|+||+||+||++ |+||||||+||||+|+|+++.+||++||+|||+||||||||+||+||.
T Consensus 253 ~~~~qL~G-elSYNNllDadaA~~lv~ef~~~Pa~aivKH~nPCGvA~g~~l~~Ay~~A~~~Dp~SaFGGiiA~Nr~vD~ 331 (534)
T 4ehi_A 253 ANFKALKG-EASFNNLTDINAALNLASSFDKAPAIAIVKHGNPCGFAIKENLVQSYIHALKCDSVSAYGGVVAINGTLDE 331 (534)
T ss_dssp HHCEEEES-CCCHHHHHHHHHHHHHHTSSTTSCEEEEEETTEEEEEEECSSHHHHHHHHHTTCHHHHTTCEEEEEEEECH
T ss_pred ccceEecc-ccCccchHhHHHHHHHHHhcCCCCEEEEEecCCcchhhcCccHHHHHHHHHhcCCccccCCEEEECCccCH
Confidence 78999999 9999999999999999999998 999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcccCCCCCccccEEEEEEcCCCCHHHHHHHhhccCCceEEEecC----CCCCCceEEEEceeEEEecCCCCCC
Q 007518 393 ALAKELREYRSPTDGETRMFYEIVVAPSYTEEGLEILRGKSKNLRILETKK----NKKGKLSLRQVGGGWLAQDSDDLTP 468 (600)
Q Consensus 393 ~tA~~i~~~~~~~~~~~~~F~EvIIAP~f~~eAleiL~~K~KnlRlL~~~~----~~~~~~~~r~v~GG~LvQ~~D~~~~ 468 (600)
+||++|+++ |+||||||+|++||||||++| ||+|||+++. ..++.+++|+|.||+|+|++|...+
T Consensus 332 ~tA~~i~~~----------F~EvVIAP~y~~eAleiL~~K-KnlRiL~~~~~~~~~~~~~~e~r~v~GG~LvQ~~d~~~~ 400 (534)
T 4ehi_A 332 ALANKINEI----------YVEVIIAANVDEKALAVFEGK-KRIKIFTQESPFLIRSFDKYDFKHIDGGFVYQNSDEVGE 400 (534)
T ss_dssp HHHHHHTTS----------CCSEEEEEEECHHHHHTTSSC-SSCEEEECSSSSCCCCCCSEEEEEETTEEEEEECCCCCT
T ss_pred HHHHHHhhh----------EEEEEEcCCCCHHHHHHHHhC-CCceEEEECCccccCCCCCeEEEEEeeEEEEECCCCCCC
Confidence 999999999 999999999999999999999 9999999975 1234689999999999999999888
Q ss_pred Ccc-cceeecCCCCCHHHHHHHHHHHHHHhhhcceEEEEEeCCeEEEecCCCCcHHHHHHHHHHHcCC---ccCceEEee
Q 007518 469 EDI-QFKVVSEKKPQESELHDAEFAWLCVKHVKSNAIVIAKNNCMLGMGSGQPNRRESLRIAMKKAGD---EVKGAALAS 544 (600)
Q Consensus 469 ~~~-~~~vVT~~~Pt~~e~~dL~FAwkvvKhvKSNAIV~ak~~~tvGiGaGQ~sRVds~~iA~~kA~~---~~~GavlAS 544 (600)
++. +|+|||+++||++||+||+|||++|||||||||||+|||||||||+||||||||+|+|++||++ +++|+||||
T Consensus 401 ~~~~~~~vVT~~~pt~~e~~DL~FAw~v~K~vKSNAIv~akdg~tvGiGaGQ~sRV~s~r~A~~kA~~~g~~~~G~vlAS 480 (534)
T 4ehi_A 401 DELKNAKLMSQREASKEELKDLEIAMKIAAFTKSNNVVYVKNGAMVAIGMGMTSRIDAAKAAIAKAKEMGLDLQGCVLAS 480 (534)
T ss_dssp TTTTTSEECSSBCCCHHHHHHHHHHHHHHHHSCSSCEEEEETTEEEEEECSSSCHHHHHHHHHHHHHHTTCCCTTCEEEC
T ss_pred CchhcceeeCCCCCCHHHHHHHHHHHHHHHhcCCceEEEEeCCeEEEECCCCcchHHHHHHHHHHHHhhccCCCCeEEEe
Confidence 777 8999999999999999999999999999999999999999999999999999999999999965 589999999
Q ss_pred cccccCCccchHHHHHHCCCeEEecCCCCCCchHHHHHHHhcCcEEEecCCccCCC
Q 007518 545 DAFFPFAWKDAVEEACENGIGVIAEPGGSIRDGDAIDCCNKYGVALLLTSVRHFKH 600 (600)
Q Consensus 545 DAFFPF~~~D~ve~Aa~aGi~aIIQPGGSiRD~evI~aa~e~giaMvfTg~RHFrH 600 (600)
||||||+ |+||.|+++||+|||||||||||+|||++||||||+|||||+|||||
T Consensus 481 DAFFPF~--D~ve~Aa~aGV~aIiQPGGSiRD~evI~aane~giaMvfTG~RhF~H 534 (534)
T 4ehi_A 481 EAFFPFR--DSIDEASKVGVKAIVEPGGSIRDDEVVKAADEYGMALYFTGVRHFLH 534 (534)
T ss_dssp SSCCCST--HHHHHHHHTTCCEEEECCCCTTHHHHHHHHHHHTCEEEECSCCCCCC
T ss_pred ccccCCC--ccHHHHHHcCCEEEECCCCCCccHHHHHHHHHcCCeEEEcCccCcCC
Confidence 9999999 99999999999999999999999999999999999999999999999
No 3
>1g8m_A Aicar transformylase-IMP cyclohydrolase; homodimer, 2 functional domains, IMPCH domain = alpha/beta/alpha; HET: G; 1.75A {Gallus gallus} SCOP: c.24.1.3 c.97.1.4 PDB: 1thz_A* 2b1g_A* 2b1i_A* 2iu0_A* 2iu3_A* 1m9n_A* 1oz0_A* 1pkx_A* 1p4r_A* 1pl0_A*
Probab=100.00 E-value=9.5e-202 Score=1619.60 Aligned_cols=491 Identities=38% Similarity=0.602 Sum_probs=471.1
Q ss_pred CcEEEEEecCcccHHHHHHHHHHcCcEEEEechhHHHHHHCCCeeEEecccCCCCCCCCCcccccccccccccccCCCCH
Q 007518 75 NKQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLENAGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQK 154 (600)
Q Consensus 75 i~rALISVsDK~glv~~Ak~L~~lGfeIiATgGTAk~L~e~GI~v~~VskiTGfPEildGRVKTLHPkIhGGILarr~~~ 154 (600)
.++|||||+||+++++||+.|.++||+|+||+||+++|+++||+|+.|+++||||||||||||||||+||||||+ |+++
T Consensus 5 ~G~aLISV~DK~~iv~lAk~L~~lGf~I~ATgGTAk~L~e~GI~v~~V~k~TgfPE~l~GRVKTLHP~ihgGiLa-r~~~ 83 (593)
T 1g8m_A 5 QQLALLSVSEKAGLVEFARSLNALGLGLIASGGTATALRDAGLPVRDVSDLTGFPEMLGGRVKTLHPAVHAGILA-RNIP 83 (593)
T ss_dssp CCEEEEEESCCTTHHHHHHHHHHTTCEEEECHHHHHHHHHTTCCCEEHHHHHSCCCBGGGTBSSCSHHHHHHHHC-CSSH
T ss_pred CCEEEEEEeCcHhHHHHHHHHHHCCCEEEEchHHHHHHHHCCCeEEEeecccCCchhhcCCccccCchhhhhhcc-CCCH
Confidence 478999999999999999999999999999999999999999999999999999999999999999999999999 9999
Q ss_pred HhHHHHHHcCCCceeEEEEeccCcHHhhhcCCCCChhhhhhccccchHHHHHHHHHCCCCEEEEeCCCCHHHHHHHHhCC
Q 007518 155 HHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGPAMIRAAAKNHKDVLVVVGSEDYPALLEFLKGN 234 (600)
Q Consensus 155 ~h~~~l~~~~I~~IDlVVVNLYPFe~tv~~~~~~~~ee~IEnIDIGGpsmiRAAAKN~~~V~Vv~dP~DY~~vl~eL~~G 234 (600)
+|+++|++|||+||||||||||||++||+++ +++++|+|||||||||||||||||||++|+|||||+||+.|+++|+.|
T Consensus 84 ~h~~~l~~~~I~~iDlVvvNLYPF~~tva~~-~~~~~e~iEnIDIGGptmlRaAAKN~~~V~Vv~dp~dY~~vl~el~~g 162 (593)
T 1g8m_A 84 EDNADMNKQDFSLVRVVVCNLYPFVKTVSSP-GVTVPEAVEKIDIGGVALLRAAAKNHARVTVVCDPADYSSVAKEMAAS 162 (593)
T ss_dssp HHHHHHHHTTCCCEEEEEEECCCHHHHHTST-TCCHHHHHTTCCSHHHHHHHHHHHTTTTCEEECCGGGHHHHHHHHHTS
T ss_pred HHHHHHHHcCCCceeEEEEeccCHHHhhccC-CCCHHHHHhhCCCCcHHHHHHHHhCCCCEEEECCHHHHHHHHHHHHhC
Confidence 9999999999999999999999999999987 999999999999999999999999999999999999999999999987
Q ss_pred CC---CHHHHHHHHHHHHHHHhhhhHHHHHHHHhhhcccCCCCCceeeccccccccccCCCccc-ccccccccchhhhcc
Q 007518 235 QD---DQQFRRKLAWKAFQHVASYDSAVSEWLWKQIAEEDKFPPSFTVPLELKSSLRYGENPHQ-KAAFYVDKSLAEVNA 310 (600)
Q Consensus 235 ~~---s~~~R~~LA~kAF~~TA~YD~aIa~yl~~~~~~~~~~p~~~~~~~~~~~~LRYGENPHQ-~Aa~Y~~~~~~~~~~ 310 (600)
.+ |+++|++||.|||+|||+||++|++||.++..+ -.+.+.||||||||| +|+||.+.
T Consensus 163 ~~~~~s~~~R~~LA~kAF~~Ta~YD~aIa~y~~~~~~~-----------~~~~~~LRYGeNPHQk~Aa~Y~~~------- 224 (593)
T 1g8m_A 163 KDKDTSVETRRHLALKAFTHTAQYDAAISDYFRKEYSK-----------GVSQLPLRYGMNPHQSPAQLYTTR------- 224 (593)
T ss_dssp TTSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCB-----------TTTEEEESCSSSTTSCCEEEECSS-------
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc-----------ccccccccCCCCCCccchhheecc-------
Confidence 77 999999999999999999999999999875322 157899999999999 89999753
Q ss_pred CCccccccccCCCCCCchhhcHHHHHHHHHhcCC----CeEEEEccCCccccccc-------------CC-------HHH
Q 007518 311 GGIATAIQHHGKEMSYNNYLDADAAWNCVSEFKN----PTCVIVKHTNPCGVASR-------------DD-------ILE 366 (600)
Q Consensus 311 ~~~~~~~ql~GKeLSYNN~lD~daA~~lv~ef~~----pa~vivKH~nPCGvA~~-------------~~-------l~e 366 (600)
++.+++|||||| |||||+|+|+||+||+||++ |+||||||+||||+|+| +| +.+
T Consensus 225 -g~~~~~~L~Gk~-sYnNl~Dad~A~~lv~ef~~a~~~Paaai~KH~nPcG~Avg~pl~~~~~~~~~v~~~~~~ls~la~ 302 (593)
T 1g8m_A 225 -PKLPLTVVNGSP-GFINLCDALNAWQLVKELKQALGIPAAASFKHVSPAGAAVGIPLSEEEAQVCMVHDLHKTLTPLAS 302 (593)
T ss_dssp -SSCSEEEEESCC-CHHHHHHHHHHHHHHHHHHHHHCSCEEEEEETTEEEEEEECCCCCHHHHHHTTCTTTGGGCCHHHH
T ss_pred -cccCcEEecCCC-CcchhhhhHHHHHHHHHHHhhcCCCcEEEeecCCcceEEeccccchhhhhhcccccccccccHHHH
Confidence 578899999999 99999999999999999987 99999999999999999 77 999
Q ss_pred HHHHHHhcCCCCcCCCEEEEccccCHHHHHHHhcccCCCCCccccEEEEEEcCCCCHHHHHHHhhccCCce--EEEecCC
Q 007518 367 AYKLAVKADPVSAFGGIVAFNVEVDEALAKELREYRSPTDGETRMFYEIVVAPSYTEEGLEILRGKSKNLR--ILETKKN 444 (600)
Q Consensus 367 Ay~~A~~~DpvSaFGGIVA~Nr~vD~~tA~~i~~~~~~~~~~~~~F~EvIIAP~f~~eAleiL~~K~KnlR--lL~~~~~ 444 (600)
||++||.|||+|+||||||+||+||.+||++|+++ |+||||||+|++||||||++| ||+| ||++++.
T Consensus 303 Ay~rA~~aDp~SaFGgiiA~n~~vD~~tA~~i~~~----------f~EvVIAP~y~~eAleiL~~K-Kn~r~~vL~~~~~ 371 (593)
T 1g8m_A 303 AYARSRGADRMSSFGDFIALSDICDVPTAKIISRE----------VSDGVVAPGYEEEALKILSKK-KNGGYCVLQMDPN 371 (593)
T ss_dssp HHHHHHHSCTTTTTTEEEEESSCBCHHHHHHHHTS----------CEEEEEESCBCHHHHHHHHHG-GGGTCEEEEECTT
T ss_pred HHHHHHcCCcccccCCEEEEcCccCHHHHHHHhhh----------EEEEEEcCCCCHHHHHHHHhC-cCcceEEEEECCC
Confidence 99999999999999999999999999999999999 999999999999999999999 9999 9999754
Q ss_pred C-CCCceEEEEceeEEEecCCCCCCCcccc-eeecCC-CCCHHHHHHHHHHHHHHhhhcceEEEEEeCCeEEEecCCCCc
Q 007518 445 K-KGKLSLRQVGGGWLAQDSDDLTPEDIQF-KVVSEK-KPQESELHDAEFAWLCVKHVKSNAIVIAKNNCMLGMGSGQPN 521 (600)
Q Consensus 445 ~-~~~~~~r~v~GG~LvQ~~D~~~~~~~~~-~vVT~~-~Pt~~e~~dL~FAwkvvKhvKSNAIV~ak~~~tvGiGaGQ~s 521 (600)
. ++.+++|+|.||+|+|++|...+++++| ++||++ +||++|++||+|||++|||||||||||+|||||||||+||||
T Consensus 372 ~~~~~~e~r~v~Gg~L~Q~rd~~~~~~~~~~~vVT~~~~pt~~e~~DL~fAw~v~K~vkSNaIv~akdg~tvGiGaGQ~s 451 (593)
T 1g8m_A 372 YEPDDNEIRTLYGLQLMQKRNNAVIDRSLFKNIVTKNKTLPESAVRDLIVASIAVKYTQSNSVCYAKDGQVIGIGAGQQS 451 (593)
T ss_dssp CCCCSEEEEEETTEEEEEECCCCCCSGGGGCCBCSSSCCCCHHHHHHHHHHHHHHHTSCSSCEEEEETTEEEEEECSCSC
T ss_pred CCCCCeeEEEECcEEEEECCCCCCCCHHHHHHhccCCCCcCHHHHHHHHHHHHHHHhcCcceEEEEECCeEEEECCCCCc
Confidence 3 3468999999999999999987788889 999997 999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcC----------------------------------C-------------------------------c
Q 007518 522 RRESLRIAMKKAG----------------------------------D-------------------------------E 536 (600)
Q Consensus 522 RVds~~iA~~kA~----------------------------------~-------------------------------~ 536 (600)
||||+|+|++||+ + +
T Consensus 452 RV~~~rlA~~KA~~w~lr~~~~v~~~~~~~~~~r~~~~n~id~~~~~~~~~~~~~~~~~~~f~~~p~~~t~~ek~~w~~~ 531 (593)
T 1g8m_A 452 RIHCTRLAGDKANSWWLRHHPRVLSMKFKAGVKRAEVSNAIDQYVTGTIGEDEDLVKWQAMFEEVPAQLTEAEKKQWIAK 531 (593)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHTCEECTTCCHHHHHHHHHHHHHTCSCSTHHHHHHHTTEEECCCCCCHHHHHHHHTT
T ss_pred hHHHHHHHHHHhhhhhhhcchhhhcccccchhhhhhhhcchhhhcccccccchhhhhhhhhhccccccccHHHHHhhhcc
Confidence 9999999999997 3 5
Q ss_pred cCceEEeecccccCCccchHHHHHHCCCeEEecCCCCCCchHHHHHHHhcCcEEEecCCccCCC
Q 007518 537 VKGAALASDAFFPFAWKDAVEEACENGIGVIAEPGGSIRDGDAIDCCNKYGVALLLTSVRHFKH 600 (600)
Q Consensus 537 ~~GavlASDAFFPF~~~D~ve~Aa~aGi~aIIQPGGSiRD~evI~aa~e~giaMvfTg~RHFrH 600 (600)
++|+||||||||||+ |+||.|+++||++||||||||||+|||++||||||+|||||+|||||
T Consensus 532 ~~G~vlaSDAFFPF~--D~v~~A~~aGV~aIiQPGGSiRD~evI~aane~giaMvfTG~RhF~H 593 (593)
T 1g8m_A 532 LTAVSLSSDAFFPFR--DNVDRAKRIGVQFIVAPSGSAADEVVIEACNELGITLIHTNLRLFHH 593 (593)
T ss_dssp CCCEEEEESSCCSST--HHHHHHHTTTEEEEEEECCCTTHHHHHHHHHHHTCEEEEESCCCCCC
T ss_pred cCceEEEeccccCCc--hhHHHHHHhCCeEEECCCCCcCCHHHHHHHHHcCCeEEECCCCCCCC
Confidence 679999999999999 99999999999999999999999999999999999999999999999
No 4
>1zcz_A Bifunctional purine biosynthesis protein PURH; TM1249; HET: PG4; 1.88A {Thermotoga maritima} SCOP: c.24.1.3 c.97.1.4
Probab=100.00 E-value=4.5e-199 Score=1559.06 Aligned_cols=453 Identities=40% Similarity=0.634 Sum_probs=438.5
Q ss_pred CCCcEEEEEecCcccHHHHHHHHHHcCcEEEEechhHHHHHHCCCeeEEecccCCCCCCCCCcccccccccccccccCCC
Q 007518 73 QANKQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLENAGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRD 152 (600)
Q Consensus 73 ~~i~rALISVsDK~glv~~Ak~L~~lGfeIiATgGTAk~L~e~GI~v~~VskiTGfPEildGRVKTLHPkIhGGILarr~ 152 (600)
+-+++|||||+||+||++||+.|.++||||+|||||+++|+++||+|+.|+++||||||||||||||||+||||||+||+
T Consensus 11 ~~~~~aliSV~DK~gl~~~A~~L~~~G~eiisTgGTak~L~~~Gi~v~~Vs~~TgfPEildGRVKTLHP~ihggiLa~r~ 90 (464)
T 1zcz_A 11 HHMKRILVSLYEKEKYLDILRELHEKGWEIWASSGTAKFLKSNGIEANDVSTITGFENLLGGLVKTLHPEIFAGILGPEP 90 (464)
T ss_dssp --CCEEEEECSSTGGGHHHHHHHHHTTCEEEECHHHHHHHHHTTCCCEEGGGGSCCCCGGGGTTTTCCHHHHHHHHSSSC
T ss_pred hhccEEEEEecCccCHHHHHHHHHHCCCEEEECchHHHHHHHCCCceEEHHhhcCCchhhcCcccccChhheeeeeecCC
Confidence 35789999999999999999999999999999999999999999999999999999999999999999999999999997
Q ss_pred CHHhHHHHHHcCCCceeEEEEeccCcHHhhhcCCCCChhhhhhccccchHHHHHHHHHCCCCEEEEeCCCCHHHHHHHHh
Q 007518 153 QKHHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGPAMIRAAAKNHKDVLVVVGSEDYPALLEFLK 232 (600)
Q Consensus 153 ~~~h~~~l~~~~I~~IDlVVVNLYPFe~tv~~~~~~~~ee~IEnIDIGGpsmiRAAAKN~~~V~Vv~dP~DY~~vl~eL~ 232 (600)
+|||||||||| |||||||||||||||||||++|+|||||+||+.++++
T Consensus 91 --------------~IDlVVvNLYP----------------iEnIDIGGpsmiRaAAKN~~~V~vv~dp~dY~~vl~~-- 138 (464)
T 1zcz_A 91 --------------RWDVVFVDLYP----------------PPDIDIGGVALLRAAAKNWKKVKPAFDMETLKLAIEI-- 138 (464)
T ss_dssp --------------SCSEEEECCCC----------------TTCCCSHHHHHHHHHHHTTTTCEEECSHHHHHHHHHC--
T ss_pred --------------CccEEEEcCCc----------------hhhhccccHHHHHHHHHcCCCEEEECCHHHHHHHHHh--
Confidence 99999999999 8999999999999999999999999999999999987
Q ss_pred CCCCCHHHHHHHHHHHHHHHhhhhHHHHHHHHhhhcccCCCCCceeecccc-ccccccCCCcccccccccccchhhhccC
Q 007518 233 GNQDDQQFRRKLAWKAFQHVASYDSAVSEWLWKQIAEEDKFPPSFTVPLEL-KSSLRYGENPHQKAAFYVDKSLAEVNAG 311 (600)
Q Consensus 233 ~G~~s~~~R~~LA~kAF~~TA~YD~aIa~yl~~~~~~~~~~p~~~~~~~~~-~~~LRYGENPHQ~Aa~Y~~~~~~~~~~~ 311 (600)
+|+++|++||.|||+|||.||++|+++ ||+.+++.+.+ .++|||||||||+|+||.+.
T Consensus 139 ---~~~~~R~~LA~kAF~~Ta~YD~aIa~~----------fp~~~~~~~~~~~~~LRYGENPHQ~Aa~Y~~~-------- 197 (464)
T 1zcz_A 139 ---DDEETRKYLAGMTFAFTSVYDSIRANQ----------FVEGISLAFKREDLQLRYGENPHEKAFVYGKP-------- 197 (464)
T ss_dssp ---CCHHHHHHHHHHHHHHHHHHHHHHHHH----------HSTTSEEEEEEECCCCSCSSSTTSCEEEESCC--------
T ss_pred ---ccHHHHHHHHHHHHHHHhhhhHHHhcc----------cchhEEeecccccCccCCCCCCCcccceeCCC--------
Confidence 899999999999999999999999995 47788999999 99999999999999999642
Q ss_pred CccccccccCCCCCCchhhcHHHHHHHHHhcCCCeEEEEccCCcccccccCCHHHHHHHHHhcCCCCcCCCEEEEccccC
Q 007518 312 GIATAIQHHGKEMSYNNYLDADAAWNCVSEFKNPTCVIVKHTNPCGVASRDDILEAYKLAVKADPVSAFGGIVAFNVEVD 391 (600)
Q Consensus 312 ~~~~~~ql~GKeLSYNN~lD~daA~~lv~ef~~pa~vivKH~nPCGvA~~~~l~eAy~~A~~~DpvSaFGGIVA~Nr~vD 391 (600)
.+++||||||||||||+|+|+||+||+||++|+||||||+||||+|+|+|+.|||++||+|||+||||||||+||+||
T Consensus 198 --~~~~qL~GKelSYNNi~DadaA~~lv~ef~~Pa~aivKH~nPCGvA~g~~l~~Ay~~A~~~Dp~SaFGGiiA~Nr~vD 275 (464)
T 1zcz_A 198 --AFEILHEGKTISFNNILDAENAWFMAKNLPRMGAVVVKHQSPCGAAIGEDKVEIVKKAIEADDESSFGGILAVNFEMD 275 (464)
T ss_dssp --SEEEECSSSCCCHHHHHHHHHHHHHHHTCSSSEEEEEETTEEEEEEECSCHHHHHHHHHHHTTTTTTTEEEEESSCBC
T ss_pred --ccceeccCccCCcchhhhhHHHHHHHHhcCCCeEEEEecCCccceecCcchHHHHHHHHhcCCccccCCEEEEcCccC
Confidence 678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcccCCCCCccccEEEEEEcCCCCHHHHHHHhhccCCceEEEecCCCCCCceEEEEceeEEEecCCCCCCCcc
Q 007518 392 EALAKELREYRSPTDGETRMFYEIVVAPSYTEEGLEILRGKSKNLRILETKKNKKGKLSLRQVGGGWLAQDSDDLTPEDI 471 (600)
Q Consensus 392 ~~tA~~i~~~~~~~~~~~~~F~EvIIAP~f~~eAleiL~~K~KnlRlL~~~~~~~~~~~~r~v~GG~LvQ~~D~~~~~~~ 471 (600)
.+||++| ++ |+||||||+|++|||||| +| ||+|||+++ . +..+++|+|.||+|+|++|. ++.
T Consensus 276 ~~tA~~i-~~----------F~EvVIAP~~~~eAleiL-~K-KnlRlL~~~-~-~~~~e~r~v~GG~LvQ~~D~---~~~ 337 (464)
T 1zcz_A 276 EEVAKSL-KK----------YLEVIVAPSFTQEAIEVL-SK-KKVRLLKPG-D-YASWAGKMAFGSLVLSERKY---PEG 337 (464)
T ss_dssp HHHHHHC-CS----------CEEEEECSCBCHHHHHHH-TT-SSCEEEEEC-C-CCCEEEEEETTEEEEEECCC---CCS
T ss_pred HHHHHhh-hh----------eEEEEEcCCCCHHHHHHH-hc-CCeEEEEEC-C-CCCceEEEEcCEEEEECCCC---Chh
Confidence 9999999 99 999999999999999999 88 999999996 2 23689999999999999998 557
Q ss_pred cceeecCCCCCHHHHHHHHHHHHHHhhhcceEEEEEeCCeEEEecCCCCcHHHHHHHHHHHcCCccCceEEeecccccCC
Q 007518 472 QFKVVSEKKPQESELHDAEFAWLCVKHVKSNAIVIAKNNCMLGMGSGQPNRRESLRIAMKKAGDEVKGAALASDAFFPFA 551 (600)
Q Consensus 472 ~~~vVT~~~Pt~~e~~dL~FAwkvvKhvKSNAIV~ak~~~tvGiGaGQ~sRVds~~iA~~kA~~~~~GavlASDAFFPF~ 551 (600)
+|+|||+++||++||+||+|||+||||||||||||+|||||||||+||||||||+|+|++||+++.+|+||||||||||+
T Consensus 338 ~~~vVT~~~pt~~e~~DL~FAwkv~K~vKSNAIv~akdg~tvGiGaGQ~sRV~s~riA~~kA~~~~~G~vlASDAFFPF~ 417 (464)
T 1zcz_A 338 NFELVVGEPLSEKELEDLEFAYRVVEGAKSNAVLIAKDGVTVGIGSGQPSRKRAAWIATVMAGEKAKGAVAASDAFFPFP 417 (464)
T ss_dssp CCEEEESCCCCHHHHHHHHHHHHHHHHSCSSCEEEEETTEEEEEECSCSSHHHHHHHHHHHHGGGGTTCEEEESSCCSSH
T ss_pred hceEecCCCCCHHHHHHHHHHHHHHhhcccceEEEEeCCeEEEECCCCCchHHHHHHHHHHhhcccCCeEEEecccCCch
Confidence 89999999999999999999999999999999999999999999999999999999999999998999999999999999
Q ss_pred ccchHHHHHHCCCeEEecCCCCCCchHHHHHHHhcCcEEEecCCccCCC
Q 007518 552 WKDAVEEACENGIGVIAEPGGSIRDGDAIDCCNKYGVALLLTSVRHFKH 600 (600)
Q Consensus 552 ~~D~ve~Aa~aGi~aIIQPGGSiRD~evI~aa~e~giaMvfTg~RHFrH 600 (600)
|+||.|+++||+|||||||||||+|||++||||||+|||||+|||||
T Consensus 418 --D~v~~aa~aGv~aIiQPGGSiRD~evI~aane~giaMvfTG~RhF~H 464 (464)
T 1zcz_A 418 --DSLEILAQAGVKAVVAPLGSIRDEEVIEKARELGITFYKAPSRVFRH 464 (464)
T ss_dssp --HHHHHHHHTTCCEEEECCCCTTHHHHHHHHHHHTCEEEECSSCCCCC
T ss_pred --hhHHHHHHhCCeEEEcCCCCcCcHHHHHHHHHcCCeEEEccccccCC
Confidence 99999999999999999999999999999999999999999999999
No 5
>4ggi_A UDP-2,3-diacylglucosamine pyrophosphatase LPXI; structural genomics, PSI-biology; HET: UDG; 2.52A {Caulobacter crescentus} PDB: 4ggm_X*
Probab=100.00 E-value=2.7e-38 Score=319.44 Aligned_cols=212 Identities=12% Similarity=0.085 Sum_probs=159.1
Q ss_pred HHHHHhcCCCCcCCCEEEEccccCHHHHHHHhcccCCCCCccccEEEEEEcCCCCHHHHHHHhhccCCceEEEecCCC--
Q 007518 368 YKLAVKADPVSAFGGIVAFNVEVDEALAKELREYRSPTDGETRMFYEIVVAPSYTEEGLEILRGKSKNLRILETKKNK-- 445 (600)
Q Consensus 368 y~~A~~~DpvSaFGGIVA~Nr~vD~~tA~~i~~~~~~~~~~~~~F~EvIIAP~f~~eAleiL~~K~KnlRlL~~~~~~-- 445 (600)
...+..+++++.||+|+.+++..+...+..+-+. +-+.+..+.++..++.+|.+. ++++..+...
T Consensus 45 ~~~~~~~i~ig~~G~ii~~lk~~~v~~vvmaG~V----------~rp~l~~~~~D~~~~~~l~~~---~~~~~~gDd~lL 111 (283)
T 4ggi_A 45 DRYPGADVGIGEFGKIFKALRAEGCDVVCFAGNV----------SRPDFSALMPDARGLKVLPSL---IVAARKGDDALL 111 (283)
T ss_dssp TTSSEEEECTTCTTHHHHHHHHHTCCCEEEESCC----------CCCCSTTCCCCGGGTTTSHHH---HHHHHHCTTHHH
T ss_pred hhCCceEEcHHHHHHHHHHHHHhchhheeeecce----------ehhhhccccCCHHHHHHHHHH---HHhhhcccchhH
Confidence 3446678999999999999998887766666666 344455667777777776543 2222222110
Q ss_pred CCCceEEEEceeEEEecCCCCCC-CcccceeecCCCCCHHHHHHHHHHHHHHhhhcceEE---EEEeCCeEEEecCCCCc
Q 007518 446 KGKLSLRQVGGGWLAQDSDDLTP-EDIQFKVVSEKKPQESELHDAEFAWLCVKHVKSNAI---VIAKNNCMLGMGSGQPN 521 (600)
Q Consensus 446 ~~~~~~r~v~GG~LvQ~~D~~~~-~~~~~~vVT~~~Pt~~e~~dL~FAwkvvKhvKSNAI---V~ak~~~tvGiGaGQ~s 521 (600)
..-..+- -..|+.+++.+.... ....|.++|+++||++|++|+.|||+++||++||+| |+++|+++||||+||++
T Consensus 112 ~~i~~~~-e~~G~~vi~~~~~~p~l~~~~g~~t~~~p~~~~~~di~~~~~v~~~~~~~digQ~vvv~~~~~~~iea~~gt 190 (283)
T 4ggi_A 112 RRVLDEF-EKEGFEIEGAHEVMGEMTLPRGRLGKVSPAPEHMADIDKALDVAREIGRLDIGQGAVVCEGLVLAVEAQEGT 190 (283)
T ss_dssp HHHHHHH-HHTTCCCCCSHHHHHHHBCCSEESSSCCCCGGGHHHHHHHHHHHHHHHHTTSCSEEEEETTEEEEECSSSCH
T ss_pred HHHHHHH-HhCCcceechhhhhhHhhhhcCcccccCchHHHHHHHHHHHHHHHHhhccccceeeEecCCeEEEecCccch
Confidence 0000000 012444444443221 134689999999999999999999999999999999 99999999999999999
Q ss_pred HHHHHHHHHHHcCC----------ccCceEEeecccccCC--ccchHHHHHHCCCeEE-ecCCCCC--CchHHHHHHHhc
Q 007518 522 RRESLRIAMKKAGD----------EVKGAALASDAFFPFA--WKDAVEEACENGIGVI-AEPGGSI--RDGDAIDCCNKY 586 (600)
Q Consensus 522 RVds~~iA~~kA~~----------~~~GavlASDAFFPF~--~~D~ve~Aa~aGi~aI-IQPGGSi--RD~evI~aa~e~ 586 (600)
|+++.|+|..|+.. .+++++++||+||||| +-|+|+.|+++|+++| ||||||| ||+|||++||||
T Consensus 191 ~~~~~r~~~~~~~~~~~~~~~~g~~~k~~k~~qD~~fd~P~iG~dti~~~~~ag~~~ivi~~g~si~~~~~~~i~~a~~~ 270 (283)
T 4ggi_A 191 DAMLRRVADLPEAIRGRAERRLGVLAKAPKPIQETRVALPTIGVATIHRAARAGLAGIVGEAGRLLVVDREAVIAAADDL 270 (283)
T ss_dssp HHHHHHHHHSCGGGSCBTTBCCCEEEECCCCC---CCCCCEECHHHHHHHHHTTCCEEEEETTBCEETTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhccccccccceecccccccccccCCccccHHHHHHHHHcCCeEEEEcCCCcEEeCHHHHHHHHHHc
Confidence 99999999987631 3588999999999994 3399999999999997 8999997 999999999999
Q ss_pred CcEEEec
Q 007518 587 GVALLLT 593 (600)
Q Consensus 587 giaMvfT 593 (600)
||+|+-.
T Consensus 271 gi~~~~~ 277 (283)
T 4ggi_A 271 GLFVLGV 277 (283)
T ss_dssp TCEEEEE
T ss_pred CCEEEEe
Confidence 9999854
No 6
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=99.19 E-value=1.3e-11 Score=113.24 Aligned_cols=111 Identities=17% Similarity=0.186 Sum_probs=74.8
Q ss_pred cEEEEEecC--cccHHHHHHHHHHcCcEEEEechhHHHHHHCCCeeEEecccCCCCCCCCCcccccccccccccccCCCC
Q 007518 76 KQALISLSD--KKDLASLGIGLQELGYTIVSTGGTATSLENAGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQ 153 (600)
Q Consensus 76 ~rALISVsD--K~glv~~Ak~L~~lGfeIiATgGTAk~L~e~GI~v~~VskiTGfPEildGRVKTLHPkIhGGILarr~~ 153 (600)
+ +||||+| |++++++|+.|.++||+|+||+||+++|+++||+|+.|++++. +|| ++.||.|
T Consensus 26 g-vliSv~d~dK~~l~~~a~~l~~lGf~i~AT~GTa~~L~~~Gi~v~~v~k~~e-----gg~-~~~~~~i---------- 88 (143)
T 2yvq_A 26 G-ILIGIQQSFRPRFLGVAEQLHNEGFKLFATEATSDWLNANNVPATPVAWPSQ-----EGQ-NPSLSSI---------- 88 (143)
T ss_dssp E-EEEECCGGGHHHHHHHHHHHHTTTCEEEEEHHHHHHHHHTTCCCEEECCGGG-----C------CBCH----------
T ss_pred C-EEEEecccchHHHHHHHHHHHHCCCEEEECchHHHHHHHcCCeEEEEEeccC-----CCc-ccccccH----------
Confidence 6 9999996 9999999999999999999999999999999999999999862 334 4445544
Q ss_pred HHhHHHHHHcCCCceeEEEEeccCcHHhhhcCCCCChhhhhhccccchHHHHHHHHHCCCCEEEEeCCCCHHHH
Q 007518 154 KHHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGPAMIRAAAKNHKDVLVVVGSEDYPAL 227 (600)
Q Consensus 154 ~~h~~~l~~~~I~~IDlVVVNLYPFe~tv~~~~~~~~ee~IEnIDIGGpsmiRAAAKN~~~V~Vv~dP~DY~~v 227 (600)
.++-+. +.|||||.---|-. + . .--|-.|-|+|.. .+|-++|+++-=..+
T Consensus 89 ----~d~i~~--g~i~lVInt~~~~~----~--------~----~~d~~~iRR~Av~--~~IP~~T~~~tA~a~ 138 (143)
T 2yvq_A 89 ----RKLIRD--GSIDLVINLPNNNT----K--------F----VHDNYVIRRTAVD--SGIPLLTNFQVTKLF 138 (143)
T ss_dssp ----HHHHHT--TSCCEEEECCCCCG----G--------G----HHHHHHHHHHHHH--TTCCEECSHHHHHHH
T ss_pred ----HHHHHC--CCceEEEECCCCCC----c--------C----CccHHHHHHHHHH--hCCCeEcCHHHHHHH
Confidence 222222 45899874332211 1 1 1235666677766 356666665533333
No 7
>1a9x_A Carbamoyl phosphate synthetase (large chain); amidotransferase, thioester; HET: CYG ADP; 1.80A {Escherichia coli} SCOP: a.92.1.1 c.24.1.1 c.30.1.1 c.30.1.1 d.142.1.2 d.142.1.2 PDB: 1ce8_A* 1m6v_A* 1c30_A* 1bxr_A* 1c3o_A* 1cs0_A* 1jdb_B* 1kee_A* 1t36_A*
Probab=98.73 E-value=4.8e-09 Score=122.23 Aligned_cols=112 Identities=21% Similarity=0.281 Sum_probs=83.9
Q ss_pred CcEEEEEecC--cccHHHHHHHHHHcCcEEEEechhHHHHHHCCCeeEEeccc-CCCCCCCCCcccccccccccccccCC
Q 007518 75 NKQALISLSD--KKDLASLGIGLQELGYTIVSTGGTATSLENAGVSVTKVEQL-TCFPEMLDGRVKTLHPNIHGGILARR 151 (600)
Q Consensus 75 i~rALISVsD--K~glv~~Ak~L~~lGfeIiATgGTAk~L~e~GI~v~~Vski-TGfPEildGRVKTLHPkIhGGILarr 151 (600)
.+++||||+| |++++++|+.|.++||+|+||+||+++|+++||+|+.|+++ +|+|+++|
T Consensus 942 ~g~vlisv~d~~K~~~~~~a~~l~~~G~~i~aT~gTa~~l~~~gi~~~~v~~~~~g~p~i~d------------------ 1003 (1073)
T 1a9x_A 942 HGRALLSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQD------------------ 1003 (1073)
T ss_dssp SSEEEEECCGGGGTTHHHHHHHHHHTTCEEEECHHHHHHHHTTTCCCEECBCTTTCSSBHHH------------------
T ss_pred cceEEEEecCcCHHHHHHHHHHHHHCCCEEEEcCchHHHHHhCCceEEEEeecCCCCccHHH------------------
Confidence 3689999996 99999999999999999999999999999999999999998 77777643
Q ss_pred CCHHhHHHHHHcCCCceeEEEEeccCcHHhhhcCCCCChhhhhhccccchHHHHHHHHHCCCCEEEEeCCCCHHHHHHHH
Q 007518 152 DQKHHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGPAMIRAAAKNHKDVLVVVGSEDYPALLEFL 231 (600)
Q Consensus 152 ~~~~h~~~l~~~~I~~IDlVVVNLYPFe~tv~~~~~~~~ee~IEnIDIGGpsmiRAAAKN~~~V~Vv~dP~DY~~vl~eL 231 (600)
.+++ +.|||||.---. ..... -|- .||.+|=+| +|-++|..+--..+++.|
T Consensus 1004 -------~~~~---~~~~~~~~~~~~-~~~~~----------------~~~-~~r~~a~~~-~~~~~t~~~~~~~~~~~~ 1054 (1073)
T 1a9x_A 1004 -------RIKN---GEYTYIINTTSG-RRAIE----------------DSR-VIRRSALQY-KVHYDTTLNGGFATAMAL 1054 (1073)
T ss_dssp -------HHHH---TCCSEEEECCCS-HHHHH----------------HTH-HHHHHHHHT-TCEEESSHHHHHHHHHHH
T ss_pred -------HHHc---CCeEEEEECCCC-ccccc----------------chH-HHHHHHHHh-CCCEEccHHHHHHHHHHH
Confidence 1333 347888743322 11111 133 455555544 678899888777778777
Q ss_pred hC
Q 007518 232 KG 233 (600)
Q Consensus 232 ~~ 233 (600)
+.
T Consensus 1055 ~~ 1056 (1073)
T 1a9x_A 1055 NA 1056 (1073)
T ss_dssp TC
T ss_pred Hh
Confidence 53
No 8
>2xw6_A MGS, methylglyoxal synthase; lyase; 1.08A {Thermus SP} PDB: 2x8w_A 1wo8_A
Probab=98.65 E-value=2.3e-08 Score=92.15 Aligned_cols=118 Identities=19% Similarity=0.285 Sum_probs=87.7
Q ss_pred CCcEEEEEec--CcccHHHHHHHHHHc--CcEEEEechhHHHHHH-CCCeeEEecccCCCCCCCCCcccccccccccccc
Q 007518 74 ANKQALISLS--DKKDLASLGIGLQEL--GYTIVSTGGTATSLEN-AGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGIL 148 (600)
Q Consensus 74 ~i~rALISVs--DK~glv~~Ak~L~~l--GfeIiATgGTAk~L~e-~GI~v~~VskiTGfPEildGRVKTLHPkIhGGIL 148 (600)
..+++-+||. ||..++++|+.|.++ ||+|+||+||+++|++ +||+|+.|.++. |+|| |
T Consensus 2 ~~~~ialsv~D~dK~~~v~~a~~~~~ll~Gf~l~AT~gTa~~L~e~~Gl~v~~v~k~~-----~eG~-----p------- 64 (134)
T 2xw6_A 2 HMRALALIAHDAKKEEMVAFCQRHREVLARFPLVATGTTGRRIEEATGLTVEKLLSGP-----LGGD-----Q------- 64 (134)
T ss_dssp CSCEEEEEECGGGHHHHHHHHHHTHHHHTTSCEEECHHHHHHHHHHHCCCCEECSCGG-----GTHH-----H-------
T ss_pred CccEEEEEEecccHHHHHHHHHHHHHHhCCCEEEEccHHHHHHHHhhCceEEEEEecC-----CCCc-----c-------
Confidence 3456778888 699999999999999 9999999999999999 999999998853 1231 2
Q ss_pred cCCCCHHhHHHHHHcCCCceeEEEEeccCcHHhhhcCCCCChhhhhhccccchHHHHHHHHHCCCCEEEEeCCCCHHHHH
Q 007518 149 ARRDQKHHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGPAMIRAAAKNHKDVLVVVGSEDYPALL 228 (600)
Q Consensus 149 arr~~~~h~~~l~~~~I~~IDlVVVNLYPFe~tv~~~~~~~~ee~IEnIDIGGpsmiRAAAKN~~~V~Vv~dP~DY~~vl 228 (600)
++-++-.. +.|||||.---|.... . -+-=|-.+.|+|.. .+|-++|+.+-=+.++
T Consensus 65 -------~I~d~I~~--geIdlVInt~~pl~~~-~-------------h~~D~~~IrR~A~~--~~IP~~T~latA~a~v 119 (134)
T 2xw6_A 65 -------QMGARVAE--GRILAVIFFRDPLTAQ-P-------------HEPDVQALLRVCDV--HGVPLATNPMAAEALI 119 (134)
T ss_dssp -------HHHHHHHT--TCEEEEEEECCTTTCC-T-------------TSCCSHHHHHHHHH--HTCCEECSHHHHHHHH
T ss_pred -------hHHHHHHC--CCccEEEEccCcccCC-C-------------ccchHHHHHHHHHH--cCCCeEcCHHHHHHHH
Confidence 22222222 4689999777666421 1 01125678888887 5688999998888888
Q ss_pred HHHhC
Q 007518 229 EFLKG 233 (600)
Q Consensus 229 ~eL~~ 233 (600)
+.|+.
T Consensus 120 ~al~~ 124 (134)
T 2xw6_A 120 PWLQS 124 (134)
T ss_dssp HHHHT
T ss_pred HHHHH
Confidence 88854
No 9
>1b93_A Protein (methylglyoxal synthase); glycolytic bypass, lyase; 1.90A {Escherichia coli} SCOP: c.24.1.2 PDB: 1egh_A 1ik4_A* 1s8a_A 1s89_A
Probab=98.63 E-value=2.1e-08 Score=94.18 Aligned_cols=113 Identities=19% Similarity=0.206 Sum_probs=79.9
Q ss_pred CcEEEEEec--CcccHHHHHHHHHHc--CcEEEEechhHHHHHH-CCCeeEEecccCCCCCCCCCccccccccccccccc
Q 007518 75 NKQALISLS--DKKDLASLGIGLQEL--GYTIVSTGGTATSLEN-AGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILA 149 (600)
Q Consensus 75 i~rALISVs--DK~glv~~Ak~L~~l--GfeIiATgGTAk~L~e-~GI~v~~VskiTGfPEildGRVKTLHPkIhGGILa 149 (600)
.+++|+||. ||..++++|+.|.++ ||+|+||+||+++|++ +||+|+.|.++. | +|| |
T Consensus 11 ~g~V~lsv~D~dK~~~v~~ak~~~~ll~Gf~l~AT~gTa~~L~e~~Gl~v~~v~k~~---e--GG~-----p-------- 72 (152)
T 1b93_A 11 RKHIALVAHDHCKQMLMSWVERHQPLLEQHVLYATGTTGNLISRATGMNVNAMLSGP---M--GGD-----Q-------- 72 (152)
T ss_dssp SCEEEEEECGGGHHHHHHHHHHTHHHHTTSEEEEETTHHHHHHHHHCCCCEEECCGG---G--THH-----H--------
T ss_pred CCEEEEEEehhhHHHHHHHHHHHHHHhCCCEEEEccHHHHHHHHHhCceeEEEEecC---C--CCC-----c--------
Confidence 378999999 699999999999999 9999999999999999 999999999852 1 221 2
Q ss_pred CCCCHHhHHHHHHcCCCceeEEEEeccCcHHhhhcCCCCChhhhhhccccchHHHHHHHHHCCCCEEEEeCCCCHHHHHH
Q 007518 150 RRDQKHHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGPAMIRAAAKNHKDVLVVVGSEDYPALLE 229 (600)
Q Consensus 150 rr~~~~h~~~l~~~~I~~IDlVVVNLYPFe~tv~~~~~~~~ee~IEnIDIGGpsmiRAAAKN~~~V~Vv~dP~DY~~vl~ 229 (600)
++-++-.. +.|||||.---|... . .. +-=|-.+.|+|.. .+|-++|+.+-=+.+++
T Consensus 73 ------~I~d~I~~--geIdlVInt~~pl~~---~---~h--------~~D~~~IrR~A~~--~~IP~~T~latA~a~v~ 128 (152)
T 1b93_A 73 ------QVGALISE--GKIDVLIFFWDPLNA---V---PH--------DPDVKALLRLATV--WNIPVATNVATADFIIQ 128 (152)
T ss_dssp ------HHHHHHHT--TCCCEEEEECCTTSC---C---TT--------HHHHHHHHHHHHH--TTCCEESSHHHHHHHHT
T ss_pred ------hHHHHHHC--CCccEEEEcCCcccC---C---cc--------cccHHHHHHHHHH--cCCCEEeCHHHHHHHHH
Confidence 22222222 468999877666542 1 10 1225677788776 45666776654444433
No 10
>1vmd_A MGS, methylglyoxal synthase; TM1185, structural genomics, JCSG, P structure initiative, PSI, joint center for structural GENO lyase; 2.06A {Thermotoga maritima} SCOP: c.24.1.2
Probab=98.53 E-value=4e-08 Score=94.42 Aligned_cols=115 Identities=20% Similarity=0.226 Sum_probs=85.4
Q ss_pred CcEEEEEec--CcccHHHHHHHHHHc--CcEEEEechhHHHHHH-CCCeeEEecccCCCCCCCCCccccccccccccccc
Q 007518 75 NKQALISLS--DKKDLASLGIGLQEL--GYTIVSTGGTATSLEN-AGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILA 149 (600)
Q Consensus 75 i~rALISVs--DK~glv~~Ak~L~~l--GfeIiATgGTAk~L~e-~GI~v~~VskiTGfPEildGRVKTLHPkIhGGILa 149 (600)
.+++||||. ||..++++|+.|.++ ||+|+||+||+++|++ +||+|+.|.++- | +|| |.
T Consensus 27 ~g~V~lsv~D~dK~~lv~~ak~~~~lL~Gf~L~AT~gTa~~L~e~~Gl~v~~v~k~~---e--GG~-----pq------- 89 (178)
T 1vmd_A 27 KKRIALIAHDRRKRDLLEWVSFNLGTLSKHELYATGTTGALLQEKLGLKVHRLKSGP---L--GGD-----QQ------- 89 (178)
T ss_dssp SCEEEEEECGGGHHHHHHHHHHSHHHHTTSEEEECHHHHHHHHHHHCCCCEECSCGG---G--THH-----HH-------
T ss_pred CCEEEEEEehhhHHHHHHHHHHHHHHhcCCEEEEchHHHHHHHHHhCceeEEEeecC---C--CCC-----ch-------
Confidence 378999999 699999999999999 9999999999999999 999999998852 1 231 22
Q ss_pred CCCCHHhHHHHHHcCCCceeEEEEeccCcHHhhhcCCCCChhhhhhccccchHHHHHHHHHCCCCEEEEeCCCCHHHHHH
Q 007518 150 RRDQKHHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGPAMIRAAAKNHKDVLVVVGSEDYPALLE 229 (600)
Q Consensus 150 rr~~~~h~~~l~~~~I~~IDlVVVNLYPFe~tv~~~~~~~~ee~IEnIDIGGpsmiRAAAKN~~~V~Vv~dP~DY~~vl~ 229 (600)
+-++-.. +.|||||.---|... .+ -+-=|-.+.|+|.. .+|-++|+.+-=+.+++
T Consensus 90 -------I~d~I~~--geIdlVInt~dPl~~---~~-----------h~~D~~~IRR~A~~--~~IP~~TnlatA~A~v~ 144 (178)
T 1vmd_A 90 -------IGAMIAE--GKIDVLIFFWDPLEP---QA-----------HDVDVKALIRIATV--YNIPVAITRSTADFLIS 144 (178)
T ss_dssp -------HHHHHHT--TSCCEEEEECCSSSC---CT-----------TSCCHHHHHHHHHH--TTCCEESSHHHHHHHHH
T ss_pred -------HHHHHHC--CCccEEEEccCccCC---Cc-----------ccccHHHHHHHHHH--cCCCEEeCHHHHHHHHH
Confidence 2222222 468999977777652 11 01236778888887 57888888877666666
Q ss_pred HH
Q 007518 230 FL 231 (600)
Q Consensus 230 eL 231 (600)
.|
T Consensus 145 ai 146 (178)
T 1vmd_A 145 SP 146 (178)
T ss_dssp SG
T ss_pred HH
Confidence 64
No 11
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=78.33 E-value=1.6 Score=43.20 Aligned_cols=47 Identities=15% Similarity=0.413 Sum_probs=38.3
Q ss_pred ceEEeecccccCCccchHHHHHHCCCeEEecCCCCCCchHHHHHHHhcCcEEE
Q 007518 539 GAALASDAFFPFAWKDAVEEACENGIGVIAEPGGSIRDGDAIDCCNKYGVALL 591 (600)
Q Consensus 539 GavlASDAFFPF~~~D~ve~Aa~aGi~aIIQPGGSiRD~evI~aa~e~giaMv 591 (600)
+.++.-...+ -. |-++.|.++|+..|+-|| -|.|++++|+++|++.+
T Consensus 85 ~~~iGaGTVl-t~--~~a~~Ai~AGA~fIvsP~---~~~~vi~~~~~~gi~~i 131 (232)
T 4e38_A 85 EMLIGAGTIL-NG--EQALAAKEAGATFVVSPG---FNPNTVRACQEIGIDIV 131 (232)
T ss_dssp TCEEEEECCC-SH--HHHHHHHHHTCSEEECSS---CCHHHHHHHHHHTCEEE
T ss_pred CCEEeECCcC-CH--HHHHHHHHcCCCEEEeCC---CCHHHHHHHHHcCCCEE
Confidence 3444444544 46 999999999999999997 49999999999999874
No 12
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=77.54 E-value=9.6 Score=35.83 Aligned_cols=45 Identities=18% Similarity=0.317 Sum_probs=41.5
Q ss_pred chHHHHHHCCCeEEecCCCCCCchHHHHHHHhcCcEEEecCCccC
Q 007518 554 DAVEEACENGIGVIAEPGGSIRDGDAIDCCNKYGVALLLTSVRHF 598 (600)
Q Consensus 554 D~ve~Aa~aGi~aIIQPGGSiRD~evI~aa~e~giaMvfTg~RHF 598 (600)
|..+.+.+.|+.++|-.||.--++++++.|++.+++.+.|....|
T Consensus 131 ~~~~~~i~~~~~~liit~~~~~~~~v~~~a~~~~~~~i~t~~d~~ 175 (245)
T 3l2b_A 131 EIQAELIELKVSLLIVTGGHTPSKEIIELAKKNNITVITTPHDSF 175 (245)
T ss_dssp HHHHHHHHTTCSEEEECTTCCCCHHHHHHHHHHTCEEEECSSCHH
T ss_pred HHHHHHHHcCCCEEEECCCCCCCHHHHHHHHHcCCeEEEeCCChH
Confidence 788999999999999999999999999999999999999986544
No 13
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=76.64 E-value=2.6 Score=37.58 Aligned_cols=36 Identities=8% Similarity=0.105 Sum_probs=31.2
Q ss_pred chHHHHHHCCCeEE-ecCCCCCCchHHHHHHHhcCcEEE
Q 007518 554 DAVEEACENGIGVI-AEPGGSIRDGDAIDCCNKYGVALL 591 (600)
Q Consensus 554 D~ve~Aa~aGi~aI-IQPGGSiRD~evI~aa~e~giaMv 591 (600)
|.++.+.+.|+++| +|||- .++|+.+.|.++||.++
T Consensus 73 ~~v~e~~~~g~k~v~~~~G~--~~~e~~~~a~~~Girvv 109 (122)
T 3ff4_A 73 SEYNYILSLKPKRVIFNPGT--ENEELEEILSENGIEPV 109 (122)
T ss_dssp GGHHHHHHHCCSEEEECTTC--CCHHHHHHHHHTTCEEE
T ss_pred HHHHHHHhcCCCEEEECCCC--ChHHHHHHHHHcCCeEE
Confidence 78999999999876 46664 58999999999999987
No 14
>2ioj_A Hypothetical protein AF_1212; NYSGXRC, PFAM:DRTGG, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Archaeoglobus fulgidus} SCOP: c.98.2.2
Probab=75.94 E-value=1.7 Score=38.68 Aligned_cols=45 Identities=18% Similarity=0.175 Sum_probs=38.1
Q ss_pred chHHHHHH-CCCeEEecCCCCCCchHHHHHHHhcCcEEEecCCccC
Q 007518 554 DAVEEACE-NGIGVIAEPGGSIRDGDAIDCCNKYGVALLLTSVRHF 598 (600)
Q Consensus 554 D~ve~Aa~-aGi~aIIQPGGSiRD~evI~aa~e~giaMvfTg~RHF 598 (600)
|.+..|.+ .++.+||=.||--=++++++.|+++||+++-|..--|
T Consensus 64 ~~~l~a~~~~~~~~iIlt~g~~~~~~i~~~A~~~~ipvl~t~~~T~ 109 (139)
T 2ioj_A 64 DLLLTALEMPNVRCLILTGNLEPVQLVLTKAEERGVPVILTGHDTL 109 (139)
T ss_dssp HHHHHHTTCTTEEEEEEETTCCCCHHHHHHHHHHTCCEEECSSCHH
T ss_pred HHHHHHHhCCCCcEEEEcCCCCCCHHHHHHHHHCCCeEEEECCCHH
Confidence 44556666 7999999999999999999999999999999875433
No 15
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=73.10 E-value=15 Score=34.02 Aligned_cols=118 Identities=17% Similarity=0.172 Sum_probs=64.1
Q ss_pred cEEEEEecCcccHHHHHHHHHHcCcEEEEechhHHHHHHCCCeeEEecccCCCCCCCCCcccccccccccccccCCCCHH
Q 007518 76 KQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLENAGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKH 155 (600)
Q Consensus 76 ~rALISVsDK~glv~~Ak~L~~lGfeIiATgGTAk~L~e~GI~v~~VskiTGfPEildGRVKTLHPkIhGGILarr~~~~ 155 (600)
+++||+....-=-..+++.|.+.|++++.+.-....+++. ..+. . +++. +- .+-.+++
T Consensus 8 ~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~------~~~~-------~-~~~~-----~~---~D~~~~~ 65 (244)
T 1cyd_A 8 LRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSL------AKEC-------P-GIEP-----VC---VDLGDWD 65 (244)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH------HHHS-------T-TCEE-----EE---CCTTCHH
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH------HHhc-------c-CCCc-----EE---ecCCCHH
Confidence 5788888754333678999999999999987655444331 0000 0 1111 11 1222455
Q ss_pred hHHHHHHcCCCceeEEEEecc-----CcHHhhhcCCCCChhhh--hhccccchH-HHHHHHHHC------CCCEEEEeCC
Q 007518 156 HMDALSEHGIGTFDLVVVNLY-----PFYDKVTSAGGIDFEDG--IENIDIGGP-AMIRAAAKN------HKDVLVVVGS 221 (600)
Q Consensus 156 h~~~l~~~~I~~IDlVVVNLY-----PFe~tv~~~~~~~~ee~--IEnIDIGGp-smiRAAAKN------~~~V~Vv~dP 221 (600)
.++++-+ ..+++|+||.|-= ||.+ .+.++. .-++.+-|+ .+++++.+. ..+++.+++.
T Consensus 66 ~~~~~~~-~~~~id~vi~~Ag~~~~~~~~~-------~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~ 137 (244)
T 1cyd_A 66 ATEKALG-GIGPVDLLVNNAALVIMQPFLE-------VTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSM 137 (244)
T ss_dssp HHHHHHT-TCCCCSEEEECCCCCCCBCGGG-------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCG
T ss_pred HHHHHHH-HcCCCCEEEECCcccCCCCccc-------CCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcch
Confidence 5555544 5678999998853 2322 222322 223444554 445665543 4567777765
Q ss_pred CC
Q 007518 222 ED 223 (600)
Q Consensus 222 ~D 223 (600)
.-
T Consensus 138 ~~ 139 (244)
T 1cyd_A 138 VA 139 (244)
T ss_dssp GG
T ss_pred hh
Confidence 43
No 16
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=72.91 E-value=1.8 Score=42.60 Aligned_cols=32 Identities=22% Similarity=0.402 Sum_probs=30.1
Q ss_pred chHHHHHHCCCeEEecCCCCCCchHHHHHHHhcCc
Q 007518 554 DAVEEACENGIGVIAEPGGSIRDGDAIDCCNKYGV 588 (600)
Q Consensus 554 D~ve~Aa~aGi~aIIQPGGSiRD~evI~aa~e~gi 588 (600)
+.++.|+++|+..|+-|| -|+|+|++|+++||
T Consensus 76 ~~a~~ai~AGA~fivsP~---~~~evi~~~~~~~v 107 (217)
T 3lab_A 76 DDFQKAIDAGAQFIVSPG---LTPELIEKAKQVKL 107 (217)
T ss_dssp HHHHHHHHHTCSEEEESS---CCHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEeCC---CcHHHHHHHHHcCC
Confidence 889999999999999998 49999999999999
No 17
>4gmk_A Ribose-5-phosphate isomerase A; D-ribose-5-phosphate isomerase family, ribose 5-phosphate isomerisation; 1.72A {Lactobacillus salivarius}
Probab=72.63 E-value=2.8 Score=41.65 Aligned_cols=68 Identities=19% Similarity=0.270 Sum_probs=42.5
Q ss_pred CCHHHHHHHHHHHHHHhhhcceEEEEEeCCeEEEecCCCCcHHHHHHHHHHHcCCccC-ceEEeecccccCCccchHHHH
Q 007518 481 PQESELHDAEFAWLCVKHVKSNAIVIAKNNCMLGMGSGQPNRRESLRIAMKKAGDEVK-GAALASDAFFPFAWKDAVEEA 559 (600)
Q Consensus 481 Pt~~e~~dL~FAwkvvKhvKSNAIV~ak~~~tvGiGaGQ~sRVds~~iA~~kA~~~~~-GavlASDAFFPF~~~D~ve~A 559 (600)
||++|++. .-|+++++||| +|++||+|.|.|-..---++|-....+.+. .+|-.|. .+-+.|
T Consensus 2 ~~qd~~K~-~aa~~A~~~V~--------~gmvvGlGTGSTv~~~i~~L~~~~~~~~l~i~~V~tS~--------~t~~~a 64 (228)
T 4gmk_A 2 PNQDELKQ-LVGTKAVEWIK--------DGMIVGLGTGSTVKYMVDALGKRVNEEGLDIVGVTTSI--------RTAEQA 64 (228)
T ss_dssp CHHHHHHH-HHHHHHGGGCC--------TTCEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEESSH--------HHHHHH
T ss_pred cCHHHHHH-HHHHHHHHhCC--------CCCEEEECchHHHHHHHHHHHHHHhhcCCcEEEEeCcH--------HHHHHH
Confidence 77777765 56899999986 578999999988764444444333222221 2333332 456667
Q ss_pred HHCCCe
Q 007518 560 CENGIG 565 (600)
Q Consensus 560 a~aGi~ 565 (600)
.++|+.
T Consensus 65 ~~~Gi~ 70 (228)
T 4gmk_A 65 KSLGIV 70 (228)
T ss_dssp HHTTCC
T ss_pred HHcCCc
Confidence 777764
No 18
>2w4l_A DCMP deaminse, deoxycytidylate deaminase; pyrimidine metabolism, nucleotide biosynthesis, zinc, hexamer, hydrolase, metal-binding, phosphoprotein; 2.10A {Homo sapiens}
Probab=72.63 E-value=8.9 Score=36.30 Aligned_cols=102 Identities=21% Similarity=0.234 Sum_probs=71.2
Q ss_pred HHHHHHHHHhhhcce-----EEEEEeCCeEEEecCCCCc------------------------HHHHHHHHHHHc-CCcc
Q 007518 488 DAEFAWLCVKHVKSN-----AIVIAKNNCMLGMGSGQPN------------------------RRESLRIAMKKA-GDEV 537 (600)
Q Consensus 488 dL~FAwkvvKhvKSN-----AIV~ak~~~tvGiGaGQ~s------------------------RVds~~iA~~kA-~~~~ 537 (600)
-|..|..+++.-+++ |+++.+||+.||.|-=+.. -+.|-..|+.+| +.++
T Consensus 16 ~M~~A~~~A~~s~~p~~~VGAvIV~~dg~Iia~G~N~~~~~~~d~~~~~~~~~g~p~~~~~~~t~HAE~~AI~~a~g~~~ 95 (178)
T 2w4l_A 16 FMAVAFLSAQRSKDPNSQVGACIVNSENKIVGIGYNGMPNGCSDDVLPWRRTAENKLDTKYPYVCHAELNAIMNKNLTDV 95 (178)
T ss_dssp HHHHHHHHHTTCCCSSCCCEEEEECTTSCEEEEEESBCCTTCCTTTSCCCSCCSSGGGSSTTTCBCHHHHHHHC----CC
T ss_pred HHHHHHHHHHhcCCCCCCEEEEEEecCCEEEEEEECCCCcCccccccccccccCCccccccCCcCCHHHHHHHHhcCCCc
Confidence 366777777765443 5555589999999864332 267888899885 6678
Q ss_pred CceEEeecccccCCccchHHHHHHCCCeEEecCCCCCCchH----HHHHHHhcCcEEEe
Q 007518 538 KGAALASDAFFPFAWKDAVEEACENGIGVIAEPGGSIRDGD----AIDCCNKYGVALLL 592 (600)
Q Consensus 538 ~GavlASDAFFPF~~~D~ve~Aa~aGi~aIIQPGGSiRD~e----vI~aa~e~giaMvf 592 (600)
+|+.|-.- .+|=. -+.....++||+.||=---.-.|.. .++.-++.||.+..
T Consensus 96 ~g~tlYvT-lePC~--~Ca~aIi~agI~rVVy~~~~~~d~~~~~~~~~~L~~aGI~V~~ 151 (178)
T 2w4l_A 96 KGCSMYVA-LFPCN--ECAKLIIQAGIKEVIFMSDKYHDSDEATAARLLFNMAGVTFRK 151 (178)
T ss_dssp TTCEEEEE-ECCCH--HHHHHHHHTTCCEEEEEECTTTTSHHHHHHHHHHHHHTCEEEE
T ss_pred cccEEEEe-CCcHH--HHHHHHHHHCCCEEEEEeccCCCCcchHHHHHHHHHCCCEEEE
Confidence 99888763 46888 8999999999999986322233443 46778888998764
No 19
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=66.58 E-value=58 Score=27.43 Aligned_cols=94 Identities=18% Similarity=0.234 Sum_probs=58.7
Q ss_pred CCcEEEEEecCcccHHHHHHHHHHcCcEEEEechhHHHHHHCCCeeEEecccCCCCCCCCCcccccccccccccccCCCC
Q 007518 74 ANKQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLENAGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQ 153 (600)
Q Consensus 74 ~i~rALISVsDK~glv~~Ak~L~~lGfeIiATgGTAk~L~e~GI~v~~VskiTGfPEildGRVKTLHPkIhGGILarr~~ 153 (600)
...++||--.|..-...+.+.|.+.||++.........|+.
T Consensus 13 ~~~~ILivdd~~~~~~~l~~~L~~~g~~v~~~~~~~~a~~~--------------------------------------- 53 (153)
T 3hv2_A 13 RRPEILLVDSQEVILQRLQQLLSPLPYTLHFARDATQALQL--------------------------------------- 53 (153)
T ss_dssp SCCEEEEECSCHHHHHHHHHHHTTSSCEEEEESSHHHHHHH---------------------------------------
T ss_pred CCceEEEECCCHHHHHHHHHHhcccCcEEEEECCHHHHHHH---------------------------------------
Confidence 44567765556666667777888888887765443333332
Q ss_pred HHhHHHHHHcCCCceeEEEEeccCcHHhhhcCCCCChhhhhhccccchHHHHHHHHHCC--CCEEEEeCCCCHHHHHHHH
Q 007518 154 KHHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGPAMIRAAAKNH--KDVLVVVGSEDYPALLEFL 231 (600)
Q Consensus 154 ~~h~~~l~~~~I~~IDlVVVNLYPFe~tv~~~~~~~~ee~IEnIDIGGpsmiRAAAKN~--~~V~Vv~dP~DY~~vl~eL 231 (600)
+++ .++|+|++++.-- + ..|..++|.--+.+ -.|.++++..+.+.+.+.+
T Consensus 54 ------l~~---~~~dlvi~D~~l~--------~-----------~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~ 105 (153)
T 3hv2_A 54 ------LAS---REVDLVISAAHLP--------Q-----------MDGPTLLARIHQQYPSTTRILLTGDPDLKLIAKAI 105 (153)
T ss_dssp ------HHH---SCCSEEEEESCCS--------S-----------SCHHHHHHHHHHHCTTSEEEEECCCCCHHHHHHHH
T ss_pred ------HHc---CCCCEEEEeCCCC--------c-----------CcHHHHHHHHHhHCCCCeEEEEECCCCHHHHHHHH
Confidence 222 2579999987521 1 22444554444433 3577888888888888888
Q ss_pred hCC
Q 007518 232 KGN 234 (600)
Q Consensus 232 ~~G 234 (600)
+.|
T Consensus 106 ~~g 108 (153)
T 3hv2_A 106 NEG 108 (153)
T ss_dssp HTT
T ss_pred hCC
Confidence 766
No 20
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=65.96 E-value=6 Score=37.54 Aligned_cols=138 Identities=12% Similarity=0.176 Sum_probs=73.4
Q ss_pred EecCcccHHHHHHHHHHcCc-EEEEechhHHHHHHC-CCeeEEecccCCCCCCCCC--cccccccccccccccCCCCHHh
Q 007518 81 SLSDKKDLASLGIGLQELGY-TIVSTGGTATSLENA-GVSVTKVEQLTCFPEMLDG--RVKTLHPNIHGGILARRDQKHH 156 (600)
Q Consensus 81 SVsDK~glv~~Ak~L~~lGf-eIiATgGTAk~L~e~-GI~v~~VskiTGfPEildG--RVKTLHPkIhGGILarr~~~~h 156 (600)
-+.+=+..++.|+.| +.|+ =|+|-|||+++|+++ ++||..|. +||| ++|.- +.|....+| |+++-.+....
T Consensus 34 ~~~~l~~~v~~a~~~-~~~~dVIISRGgta~~lr~~~~iPVV~I~-~s~~-Dil~al~~a~~~~~kI--avvg~~~~~~~ 108 (196)
T 2q5c_A 34 KTASLTRASKIAFGL-QDEVDAIISRGATSDYIKKSVSIPSISIK-VTRF-DTMRAVYNAKRFGNEL--ALIAYKHSIVD 108 (196)
T ss_dssp EECCHHHHHHHHHHH-TTTCSEEEEEHHHHHHHHTTCSSCEEEEC-CCHH-HHHHHHHHHGGGCSEE--EEEEESSCSSC
T ss_pred EECCHHHHHHHHHHh-cCCCeEEEECChHHHHHHHhCCCCEEEEc-CCHh-HHHHHHHHHHhhCCcE--EEEeCcchhhH
Confidence 344545678899999 8998 567789999999995 78888775 3554 33331 223333333 55555544444
Q ss_pred HHHHHHcCCCceeEEEEeccCc---HHhhhcCCCCChhhhhhccccchHHHHHHHHHCCCCEEEEeCCCCHHHHHHHHh
Q 007518 157 MDALSEHGIGTFDLVVVNLYPF---YDKVTSAGGIDFEDGIENIDIGGPAMIRAAAKNHKDVLVVVGSEDYPALLEFLK 232 (600)
Q Consensus 157 ~~~l~~~~I~~IDlVVVNLYPF---e~tv~~~~~~~~ee~IEnIDIGGpsmiRAAAKN~~~V~Vv~dP~DY~~vl~eL~ 232 (600)
++.+.+. -.+|+.+.-...- ++.+.+- .++-++ .=|||....+.|.|.--. .|+.. +..+.+.+.|+
T Consensus 109 ~~~~~~l--l~~~i~~~~~~~~~e~~~~i~~l----~~~G~~-vvVG~~~~~~~A~~~Gl~-~vli~-sg~eSI~~Ai~ 178 (196)
T 2q5c_A 109 KHEIEAM--LGVKIKEFLFSSEDEITTLISKV----KTENIK-IVVSGKTVTDEAIKQGLY-GETIN-SGEESLRRAIE 178 (196)
T ss_dssp HHHHHHH--HTCEEEEEEECSGGGHHHHHHHH----HHTTCC-EEEECHHHHHHHHHTTCE-EEECC-CCHHHHHHHHH
T ss_pred HHHHHHH--hCCceEEEEeCCHHHHHHHHHHH----HHCCCe-EEECCHHHHHHHHHcCCc-EEEEe-cCHHHHHHHHH
Confidence 4544432 1224433222222 2222210 011111 226777777777665444 33333 33466766663
No 21
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=64.69 E-value=93 Score=30.14 Aligned_cols=33 Identities=21% Similarity=0.125 Sum_probs=25.6
Q ss_pred CcEEEEEecCcccHHHHHHHHHHcCcEEEEech
Q 007518 75 NKQALISLSDKKDLASLGIGLQELGYTIVSTGG 107 (600)
Q Consensus 75 i~rALISVsDK~glv~~Ak~L~~lGfeIiATgG 107 (600)
-|++||+....-==..+|+.|.+.|++++.+.-
T Consensus 47 gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r 79 (291)
T 3ijr_A 47 GKNVLITGGDSGIGRAVSIAFAKEGANIAIAYL 79 (291)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence 367999987543336789999999999988754
No 22
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=63.84 E-value=10 Score=38.10 Aligned_cols=49 Identities=12% Similarity=0.027 Sum_probs=36.8
Q ss_pred cEEEEEec----CcccHHHHHHHHHHcCcE--EEEechhHHHHHHCCCeeEEecc
Q 007518 76 KQALISLS----DKKDLASLGIGLQELGYT--IVSTGGTATSLENAGVSVTKVEQ 124 (600)
Q Consensus 76 ~rALISVs----DK~glv~~Ak~L~~lGfe--IiATgGTAk~L~e~GI~v~~Vsk 124 (600)
+++|+... +-.-++.+|+.|.+.|++ +++++.....++..|+++..+..
T Consensus 13 ~~Il~~~~~~~GHv~p~l~la~~L~~~Gh~V~~~~~~~~~~~~~~~g~~~~~~~~ 67 (424)
T 2iya_A 13 RHISFFNIPGHGHVNPSLGIVQELVARGHRVSYAITDEFAAQVKAAGATPVVYDS 67 (424)
T ss_dssp CEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHTCEEEECCC
T ss_pred ceEEEEeCCCCcccchHHHHHHHHHHCCCeEEEEeCHHHHHHHHhCCCEEEecCc
Confidence 45655332 556679999999999987 56667777889999998877654
No 23
>2hvw_A Deoxycytidylate deaminase; 3-layer (alpha-beta)-sandwich, protein-liand complex, hydrolase; HET: DCP DDN; 1.67A {Streptococcus mutans} PDB: 2hvv_A*
Probab=63.67 E-value=13 Score=35.46 Aligned_cols=100 Identities=19% Similarity=0.154 Sum_probs=70.7
Q ss_pred HHHHHHHHHhhhc-----ceEEEEEeCCeEEEecCCCCc--------------------HHHHHHHHHHHc---CCccCc
Q 007518 488 DAEFAWLCVKHVK-----SNAIVIAKNNCMLGMGSGQPN--------------------RRESLRIAMKKA---GDEVKG 539 (600)
Q Consensus 488 dL~FAwkvvKhvK-----SNAIV~ak~~~tvGiGaGQ~s--------------------RVds~~iA~~kA---~~~~~G 539 (600)
-|..|..+++.-+ ==| ||++||++||.|.-+.. .+.|-..|+.+| +.+++|
T Consensus 45 ~M~~A~~~A~~s~~~~~~VGA-VIV~dg~Iia~G~N~~~~~~~~c~d~g~~~~~~~~~~t~HAE~~AI~~A~~~g~~l~g 123 (184)
T 2hvw_A 45 FMANAELISKRSTCNRAYVGA-VLVKNNRIIATGYNGGVADTDNCDDVGHEMEDGHCIRTVHAEMNALIQCAKEGISANN 123 (184)
T ss_dssp HHHHHHHHGGGCCCTTCCCEE-EEEETTEEEEEEECEESTTSCCHHHHCCCEETTEECSEECHHHHHHHHHHHHTCCCTT
T ss_pred HHHHHHHHHHhcCCCCCCEEE-EEEECCEEEEEEECCCcccccccccccccccccccCCccCHHHHHHHHHHHcCCCcee
Confidence 3566777766532 235 45589999998864431 356677788777 457899
Q ss_pred eEEeecccccCCccchHHHHHHCCCeEEecCCCCCCch-HHHHHHHhcCcEEEe
Q 007518 540 AALASDAFFPFAWKDAVEEACENGIGVIAEPGGSIRDG-DAIDCCNKYGVALLL 592 (600)
Q Consensus 540 avlASDAFFPF~~~D~ve~Aa~aGi~aIIQPGGSiRD~-evI~aa~e~giaMvf 592 (600)
+.|-.- .+|=. -+.....++||+.||=- -+-.|. ..++.-.+.||.+..
T Consensus 124 ~tlYvT-lEPC~--mCa~aIi~agI~rVVy~-~~~~~~~~~~~~L~~aGIeV~~ 173 (184)
T 2hvw_A 124 TEIYVT-HFPCI--NCTKALLQAGVKKITYN-TAYRIHPFAIELMTQKEVEYVQ 173 (184)
T ss_dssp EEEEEE-ECCCH--HHHHHHHHHTEEEEEEE-ECCSCCHHHHHHHHHHTCEEEE
T ss_pred EEEEEC-CCCHH--HHHHHHHHHCCCeEEEE-ecCCCCHHHHHHHHHCCCEEEE
Confidence 998875 56888 99999999999998852 222233 348899999998754
No 24
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=63.33 E-value=33 Score=31.96 Aligned_cols=129 Identities=18% Similarity=0.231 Sum_probs=69.9
Q ss_pred CCCcEEEEEecCcccHHHHHHHHHHcCcEEEEechhHHHHHHCCCeeEEecccCCCCCCCCCcccccccccccccccCCC
Q 007518 73 QANKQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLENAGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRD 152 (600)
Q Consensus 73 ~~i~rALISVsDK~glv~~Ak~L~~lGfeIiATgGTAk~L~e~GI~v~~VskiTGfPEildGRVKTLHPkIhGGILarr~ 152 (600)
..-+++||+....-==..+|+.|.+.|++++.++-....|++.. .+ +..++... .++-.
T Consensus 12 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~------~~-------~~~~~~~~--------~~D~~ 70 (249)
T 3f9i_A 12 LTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLG------NA-------LKDNYTIE--------VCNLA 70 (249)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH------HH-------HCSSEEEE--------ECCTT
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH------HH-------hccCccEE--------EcCCC
Confidence 35578999888653346789999999999999987776665521 00 11122111 12223
Q ss_pred CHHhHHHHHHcCCCceeEEEEeccCcHHh-hhcCCCCChhhhhhccccchH-HHHHHHH-----HCCCCEEEEeCCCCH
Q 007518 153 QKHHMDALSEHGIGTFDLVVVNLYPFYDK-VTSAGGIDFEDGIENIDIGGP-AMIRAAA-----KNHKDVLVVVGSEDY 224 (600)
Q Consensus 153 ~~~h~~~l~~~~I~~IDlVVVNLYPFe~t-v~~~~~~~~ee~IEnIDIGGp-smiRAAA-----KN~~~V~Vv~dP~DY 224 (600)
+++.++++-+. +++||+||.|--..... ......-++++.++ +..-|+ .|+|++. ++..+++.+++..-|
T Consensus 71 ~~~~~~~~~~~-~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~-~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~ 147 (249)
T 3f9i_A 71 NKEECSNLISK-TSNLDILVCNAGITSDTLAIRMKDQDFDKVID-INLKANFILNREAIKKMIQKRYGRIINISSIVGI 147 (249)
T ss_dssp SHHHHHHHHHT-CSCCSEEEECCC-------------CHHHHHH-HHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCC-
T ss_pred CHHHHHHHHHh-cCCCCEEEECCCCCCCCccccCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHhCCCcEEEEEccHHhc
Confidence 45555555432 36899999886432211 10000123344333 344454 4566664 445678888887655
No 25
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=60.56 E-value=8 Score=34.65 Aligned_cols=36 Identities=19% Similarity=0.267 Sum_probs=30.5
Q ss_pred chHHHHHHCCCeE-EecCCCCCCchHHHHHHHhcCcEEE
Q 007518 554 DAVEEACENGIGV-IAEPGGSIRDGDAIDCCNKYGVALL 591 (600)
Q Consensus 554 D~ve~Aa~aGi~a-IIQPGGSiRD~evI~aa~e~giaMv 591 (600)
|.++.+.++|+++ ++|+|.. .+|+.++|.++||.++
T Consensus 92 ~vv~~~~~~gi~~i~~~~g~~--~~~l~~~a~~~Gi~vv 128 (144)
T 2d59_A 92 EYVEQAIKKGAKVVWFQYNTY--NREASKKADEAGLIIV 128 (144)
T ss_dssp HHHHHHHHHTCSEEEECTTCC--CHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHcCCCEEEECCCch--HHHHHHHHHHcCCEEE
Confidence 6788999999986 5577664 8999999999999976
No 26
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=59.26 E-value=10 Score=36.94 Aligned_cols=48 Identities=17% Similarity=0.307 Sum_probs=31.3
Q ss_pred ceEEeecccccCCccchHHHHHHCCCeEEecCCCCCCchHHHHHHHhcCcEEEe
Q 007518 539 GAALASDAFFPFAWKDAVEEACENGIGVIAEPGGSIRDGDAIDCCNKYGVALLL 592 (600)
Q Consensus 539 GavlASDAFFPF~~~D~ve~Aa~aGi~aIIQPGGSiRD~evI~aa~e~giaMvf 592 (600)
...+.-+..+ =. |-++.|.++|+..|+-|+ -|.+++++|.++|+.++-
T Consensus 68 ~l~vgaGtvl-~~--d~~~~A~~aGAd~v~~p~---~d~~v~~~ar~~g~~~i~ 115 (224)
T 1vhc_A 68 DFLIAAGTVL-TA--EQVVLAKSSGADFVVTPG---LNPKIVKLCQDLNFPITP 115 (224)
T ss_dssp TCEEEEESCC-SH--HHHHHHHHHTCSEEECSS---CCHHHHHHHHHTTCCEEC
T ss_pred CcEEeeCcEe-eH--HHHHHHHHCCCCEEEECC---CCHHHHHHHHHhCCCEEe
Confidence 3444445544 33 777777777777777774 367777777777776643
No 27
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=59.03 E-value=7 Score=35.00 Aligned_cols=37 Identities=14% Similarity=0.168 Sum_probs=31.3
Q ss_pred chHHHHHHCCCeE-EecCCCCCCchHHHHHHHhcCcEEEe
Q 007518 554 DAVEEACENGIGV-IAEPGGSIRDGDAIDCCNKYGVALLL 592 (600)
Q Consensus 554 D~ve~Aa~aGi~a-IIQPGGSiRD~evI~aa~e~giaMvf 592 (600)
|.++.+.+.|+++ ++|+|+. .+|+.+.|.++||.++-
T Consensus 85 ~v~~~~~~~gi~~i~~~~g~~--~~~~~~~a~~~Gir~vg 122 (140)
T 1iuk_A 85 DHLPEVLALRPGLVWLQSGIR--HPEFEKALKEAGIPVVA 122 (140)
T ss_dssp TTHHHHHHHCCSCEEECTTCC--CHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHcCCCEEEEcCCcC--HHHHHHHHHHcCCEEEc
Confidence 7899999999976 5677665 89999999999998874
No 28
>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}
Probab=58.49 E-value=31 Score=34.48 Aligned_cols=31 Identities=16% Similarity=-0.011 Sum_probs=23.7
Q ss_pred cEEEEEecCcccHHHHHHHHHHcCcEEEEec
Q 007518 76 KQALISLSDKKDLASLGIGLQELGYTIVSTG 106 (600)
Q Consensus 76 ~rALISVsDK~glv~~Ak~L~~lGfeIiATg 106 (600)
+++||+....-=-..+|+.|.+.|+++++|.
T Consensus 6 k~vlVTGas~GIG~aia~~L~~~G~~V~~~~ 36 (324)
T 3u9l_A 6 KIILITGASSGFGRLTAEALAGAGHRVYASM 36 (324)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEec
Confidence 4688887754333578999999999999863
No 29
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=58.40 E-value=35 Score=31.54 Aligned_cols=119 Identities=16% Similarity=0.243 Sum_probs=64.2
Q ss_pred cEEEEEecCcccHHHHHHHHHHcCcEEEEechhHHHHHHCCCeeEEecccCCCCCCCCCcccccccccccccccCCCCHH
Q 007518 76 KQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLENAGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKH 155 (600)
Q Consensus 76 ~rALISVsDK~glv~~Ak~L~~lGfeIiATgGTAk~L~e~GI~v~~VskiTGfPEildGRVKTLHPkIhGGILarr~~~~ 155 (600)
+++||+-...-=-..+++.|.+.|++++.+.-....+++. ..++ .| ++. + -.+-.+++
T Consensus 8 k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~------~~~~-------~~-~~~-----~---~~D~~~~~ 65 (244)
T 3d3w_A 8 RRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSL------VREC-------PG-IEP-----V---CVDLGDWE 65 (244)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH------HHHS-------TT-CEE-----E---ECCTTCHH
T ss_pred cEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH------HHHc-------CC-CCE-----E---EEeCCCHH
Confidence 5788887754334678899999999999987665554431 0011 01 111 1 11223455
Q ss_pred hHHHHHHcCCCceeEEEEecc-----CcHHhhhcCCCCChhhhhhccccchHH-HHHHHHHC------CCCEEEEeCCC
Q 007518 156 HMDALSEHGIGTFDLVVVNLY-----PFYDKVTSAGGIDFEDGIENIDIGGPA-MIRAAAKN------HKDVLVVVGSE 222 (600)
Q Consensus 156 h~~~l~~~~I~~IDlVVVNLY-----PFe~tv~~~~~~~~ee~IEnIDIGGps-miRAAAKN------~~~V~Vv~dP~ 222 (600)
.++++-+ ..+++|+||.|-= ||.+.-.+ .+++.+ ++.+-|+- +++++.+. ..+++.+++..
T Consensus 66 ~~~~~~~-~~~~id~vi~~Ag~~~~~~~~~~~~~----~~~~~~-~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~ 138 (244)
T 3d3w_A 66 ATERALG-SVGPVDLLVNNAAVALLQPFLEVTKE----AFDRSF-EVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQC 138 (244)
T ss_dssp HHHHHHT-TCCCCCEEEECCCCCCCBCGGGCCHH----HHHHHH-HHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGG
T ss_pred HHHHHHH-HcCCCCEEEECCccCCCcchhhCCHH----HHHHHH-HHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchh
Confidence 5555544 4568999998853 23221100 123333 35555553 45555542 45666666654
No 30
>4dad_A Putative pilus assembly-related protein; response regulator receiver domain, CHEY-related protein, ST genomics; 2.50A {Burkholderia pseudomallei} PDB: 4dn6_A
Probab=57.68 E-value=57 Score=27.06 Aligned_cols=40 Identities=28% Similarity=0.369 Sum_probs=26.5
Q ss_pred CCCcEEEEEecCcccHHHHHHHHHHcC-cEEEEechhHHHH
Q 007518 73 QANKQALISLSDKKDLASLGIGLQELG-YTIVSTGGTATSL 112 (600)
Q Consensus 73 ~~i~rALISVsDK~glv~~Ak~L~~lG-feIiATgGTAk~L 112 (600)
....++||--.|..-...+.+.|.+.| |++.......+.|
T Consensus 18 ~~~~~ilivdd~~~~~~~l~~~L~~~g~~~v~~~~~~~~~~ 58 (146)
T 4dad_A 18 QGMINILVASEDASRLAHLARLVGDAGRYRVTRTVGRAAQI 58 (146)
T ss_dssp GGGCEEEEECSCHHHHHHHHHHHHHHCSCEEEEECCCHHHH
T ss_pred CCCCeEEEEeCCHHHHHHHHHHHhhCCCeEEEEeCCHHHHH
Confidence 344577776556666677778888888 8887765433333
No 31
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=57.52 E-value=16 Score=34.81 Aligned_cols=57 Identities=23% Similarity=0.259 Sum_probs=42.3
Q ss_pred HHHHHcCCccCceEEeecccccCCccchHHHHHHCCCeEEecCCCCCCchHHHHHHHhcCcEEEe
Q 007518 528 IAMKKAGDEVKGAALASDAFFPFAWKDAVEEACENGIGVIAEPGGSIRDGDAIDCCNKYGVALLL 592 (600)
Q Consensus 528 iA~~kA~~~~~GavlASDAFFPF~~~D~ve~Aa~aGi~aIIQPGGSiRD~evI~aa~e~giaMvf 592 (600)
..++++.+ ......-+.++ - .|-++.|.++|+..|+-|+ -|.+++++|.++|+.++.
T Consensus 53 ~~i~~~~~--~~~~~gag~vl-~--~d~~~~A~~~GAd~v~~~~---~d~~v~~~~~~~g~~~i~ 109 (207)
T 2yw3_A 53 EALKALRK--SGLLLGAGTVR-S--PKEAEAALEAGAAFLVSPG---LLEEVAALAQARGVPYLP 109 (207)
T ss_dssp HHHHHHTT--SSCEEEEESCC-S--HHHHHHHHHHTCSEEEESS---CCHHHHHHHHHHTCCEEE
T ss_pred HHHHHHhC--CCCEEEeCeEe-e--HHHHHHHHHcCCCEEEcCC---CCHHHHHHHHHhCCCEEe
Confidence 34444444 44555556655 3 4999999999999999884 489999999999998764
No 32
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=57.14 E-value=9.7 Score=37.98 Aligned_cols=52 Identities=21% Similarity=0.257 Sum_probs=36.8
Q ss_pred CCCCcEEEEEec----CcccHHHHHHHHHHcCcEEE--EechhHHHHHHCCCeeEEecc
Q 007518 72 SQANKQALISLS----DKKDLASLGIGLQELGYTIV--STGGTATSLENAGVSVTKVEQ 124 (600)
Q Consensus 72 ~~~i~rALISVs----DK~glv~~Ak~L~~lGfeIi--ATgGTAk~L~e~GI~v~~Vsk 124 (600)
+.+++|+|+... +-..++.+++.|.+.|+++. ++ .....++..|+++..+..
T Consensus 17 ~~~~MrIl~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~-~~~~~~~~~G~~~~~~~~ 74 (398)
T 3oti_A 17 EGRHMRVLFVSSPGIGHLFPLIQLAWGFRTAGHDVLIAVA-EHADRAAAAGLEVVDVAP 74 (398)
T ss_dssp --CCCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEES-SCHHHHHTTTCEEEESST
T ss_pred hhhcCEEEEEcCCCcchHhHHHHHHHHHHHCCCEEEEecc-chHHHHHhCCCeeEecCC
Confidence 334456655543 34567899999999998764 44 666788999999888764
No 33
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=56.18 E-value=12 Score=33.47 Aligned_cols=36 Identities=25% Similarity=0.371 Sum_probs=29.6
Q ss_pred chHHHHHHCCCeEE-ecCCCCCCchHHHHHHHhcCcEEE
Q 007518 554 DAVEEACENGIGVI-AEPGGSIRDGDAIDCCNKYGVALL 591 (600)
Q Consensus 554 D~ve~Aa~aGi~aI-IQPGGSiRD~evI~aa~e~giaMv 591 (600)
|.++.+.++|+++| +++|+. .+|+.+.|.++||.++
T Consensus 84 ~v~~~~~~~g~~~i~~~~~~~--~~~l~~~a~~~Gi~~i 120 (138)
T 1y81_A 84 QVAKEAVEAGFKKLWFQPGAE--SEEIRRFLEKAGVEYS 120 (138)
T ss_dssp HHHHHHHHTTCCEEEECTTSC--CHHHHHHHHHHTCEEE
T ss_pred HHHHHHHHcCCCEEEEcCccH--HHHHHHHHHHCCCEEE
Confidence 66777888999865 577653 8999999999999976
No 34
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=55.84 E-value=41 Score=31.65 Aligned_cols=119 Identities=8% Similarity=0.094 Sum_probs=65.3
Q ss_pred cEEEEEecCcccHHHHHHHHHHcCcEEEEechhHHHHHHCCCeeEEecccCCCCCCCCCcccccccccccccccCCCCHH
Q 007518 76 KQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLENAGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKH 155 (600)
Q Consensus 76 ~rALISVsDK~glv~~Ak~L~~lGfeIiATgGTAk~L~e~GI~v~~VskiTGfPEildGRVKTLHPkIhGGILarr~~~~ 155 (600)
|++||+....-==..+|+.|.+.|++++.+.-....+++.- .+ . +++. .+-++=.+++
T Consensus 3 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~------~~---~-----~~~~--------~~~~Dv~~~~ 60 (247)
T 3dii_A 3 RGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFA------KE---R-----PNLF--------YFHGDVADPL 60 (247)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH------TT---C-----TTEE--------EEECCTTSHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH------Hh---c-----ccCC--------eEEeeCCCHH
Confidence 56888877543336789999999999999877666555410 00 0 1111 1112223344
Q ss_pred hHHHHHH---cCCCceeEEEEec-----cCcHHhhhcCCCCChhhhhh--ccccchH-HHHHHHHH----CCCCEEEEeC
Q 007518 156 HMDALSE---HGIGTFDLVVVNL-----YPFYDKVTSAGGIDFEDGIE--NIDIGGP-AMIRAAAK----NHKDVLVVVG 220 (600)
Q Consensus 156 h~~~l~~---~~I~~IDlVVVNL-----YPFe~tv~~~~~~~~ee~IE--nIDIGGp-smiRAAAK----N~~~V~Vv~d 220 (600)
.++++-+ ...++||+||.|- -||. ..+.++.-+ ++..-|+ -++|++.+ +..++..+++
T Consensus 61 ~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~-------~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS 133 (247)
T 3dii_A 61 TLKKFVEYAMEKLQRIDVLVNNACRGSKGILS-------SLLYEEFDYILSVGLKAPYELSRLCRDELIKNKGRIINIAS 133 (247)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCC-CCCCGGG-------TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECC
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcc-------cCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEcc
Confidence 4443322 1225799999987 3332 233343333 3444555 45666654 4556777776
Q ss_pred CCC
Q 007518 221 SED 223 (600)
Q Consensus 221 P~D 223 (600)
..-
T Consensus 134 ~~~ 136 (247)
T 3dii_A 134 TRA 136 (247)
T ss_dssp GGG
T ss_pred hhh
Confidence 543
No 35
>2nx8_A TRNA-specific adenosine deaminase; TAD, hydrolase; 2.00A {Streptococcus pyogenes serotype M6}
Probab=55.17 E-value=19 Score=34.01 Aligned_cols=64 Identities=16% Similarity=0.153 Sum_probs=48.8
Q ss_pred EEEEEeCCeEEEecCCCCcH-----HHHHHHHHHHcCC-----ccCceEEeecccccCCccchHHHHHHCCCeEEec
Q 007518 503 AIVIAKNNCMLGMGSGQPNR-----RESLRIAMKKAGD-----EVKGAALASDAFFPFAWKDAVEEACENGIGVIAE 569 (600)
Q Consensus 503 AIV~ak~~~tvGiGaGQ~sR-----Vds~~iA~~kA~~-----~~~GavlASDAFFPF~~~D~ve~Aa~aGi~aIIQ 569 (600)
.-||++||++||.|.-+.+. ..|-..|+.+|.. ++.|+.|-.- ..|=+ -+......+||+.|+=
T Consensus 39 GAVIV~~g~Ii~~G~N~~~~~~d~t~HAE~~AI~~a~~~~~~~~l~g~tlYvT-lEPC~--mCa~ai~~agI~rVv~ 112 (179)
T 2nx8_A 39 GCVIVKDGEIIGRGHNAREESNQAIMHAEMMAINEANAHEGNWRLLDTTLFVT-IEPCV--MCSGAIGLARIPHVIY 112 (179)
T ss_dssp EEEEEETTEEEEEEECCHHHHTCTTCCHHHHHHHHHHHHHTSSCCTTEEEEEE-ECCBH--HHHHHHHHTTCCEEEE
T ss_pred EEEEEECCEEEEEEECCCCCcCCCccCHHHHHHHHHHHHcCCCcccceEEEEC-CCCcH--HHHHHHHHhCCCeEEE
Confidence 34555899999999877654 4666777777754 4788888763 66888 8999999999998873
No 36
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=54.07 E-value=79 Score=28.70 Aligned_cols=106 Identities=13% Similarity=0.023 Sum_probs=61.0
Q ss_pred CCcEEEEEecCcccHHHHHHHHH-HcCcEEEEechhHH-HHHHCCCeeEEecccCCCCCCCCCcccccccccccccccCC
Q 007518 74 ANKQALISLSDKKDLASLGIGLQ-ELGYTIVSTGGTAT-SLENAGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARR 151 (600)
Q Consensus 74 ~i~rALISVsDK~glv~~Ak~L~-~lGfeIiATgGTAk-~L~e~GI~v~~VskiTGfPEildGRVKTLHPkIhGGILarr 151 (600)
+++++||.....-==..+++.|. +.|++++++.-... .+++. .+ .++++.. +.++-
T Consensus 4 mmk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~-------~~-------~~~~~~~--------~~~D~ 61 (221)
T 3r6d_A 4 MYXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPE-------II-------DHERVTV--------IEGSF 61 (221)
T ss_dssp SCSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHH-------HH-------TSTTEEE--------EECCT
T ss_pred eEEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhh-------cc-------CCCceEE--------EECCC
Confidence 45679998864332357889998 89999998866544 33220 00 0112211 11122
Q ss_pred CCHHhHHHHHHcCCCceeEEEEeccCcHHhhhcCCCCChhhhhhccccchHHHHHHHHHC-CCCEEEEeCCCCH
Q 007518 152 DQKHHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGPAMIRAAAKN-HKDVLVVVGSEDY 224 (600)
Q Consensus 152 ~~~~h~~~l~~~~I~~IDlVVVNLYPFe~tv~~~~~~~~ee~IEnIDIGGpsmiRAAAKN-~~~V~Vv~dP~DY 224 (600)
.+++.++++- ..+|+||.|.=+. |+| --.+++++.++ .+++..+++..-|
T Consensus 62 ~d~~~~~~~~----~~~d~vv~~ag~~-----------------n~~--~~~~~~~~~~~~~~~iv~iSs~~~~ 112 (221)
T 3r6d_A 62 QNPGXLEQAV----TNAEVVFVGAMES-----------------GSD--MASIVKALSRXNIRRVIGVSMAGLS 112 (221)
T ss_dssp TCHHHHHHHH----TTCSEEEESCCCC-----------------HHH--HHHHHHHHHHTTCCEEEEEEETTTT
T ss_pred CCHHHHHHHH----cCCCEEEEcCCCC-----------------Chh--HHHHHHHHHhcCCCeEEEEeeceec
Confidence 2455555443 3679999886321 344 56677777665 4577777776655
No 37
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=53.99 E-value=21 Score=35.23 Aligned_cols=52 Identities=15% Similarity=0.177 Sum_probs=39.2
Q ss_pred CCCcEEEEEec----CcccHHHHHHHHHHcCcEE--EEechhHHHHHHCCCeeEEecc
Q 007518 73 QANKQALISLS----DKKDLASLGIGLQELGYTI--VSTGGTATSLENAGVSVTKVEQ 124 (600)
Q Consensus 73 ~~i~rALISVs----DK~glv~~Ak~L~~lGfeI--iATgGTAk~L~e~GI~v~~Vsk 124 (600)
...+|+|+... +-..++.+++.|.+.|+++ +++++-...+++.|+++..+..
T Consensus 18 ~~~MrIl~~~~~~~Gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~~~g~~~~~~~~ 75 (412)
T 3otg_A 18 GRHMRVLFASLGTHGHTYPLLPLATAARAAGHEVTFATGEGFAGTLRKLGFEPVATGM 75 (412)
T ss_dssp CCSCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHHTTCEEEECCC
T ss_pred cceeEEEEEcCCCcccHHHHHHHHHHHHHCCCEEEEEccHHHHHHHHhcCCceeecCc
Confidence 34456666554 4566789999999999885 4556667888999999988874
No 38
>3ixq_A Ribose-5-phosphate isomerase A; structural genomics, pentose phosphate pathway, carbon fixation, NPPSFA; HET: PGO; 1.78A {Methanocaldococcus jannaschii}
Probab=53.94 E-value=11 Score=37.43 Aligned_cols=38 Identities=24% Similarity=0.324 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHHHHhhhcceEEEEEeCCeEEEecCCCCcHHHHHHHH
Q 007518 483 ESELHDAEFAWLCVKHVKSNAIVIAKNNCMLGMGSGQPNRRESLRIA 529 (600)
Q Consensus 483 ~~e~~dL~FAwkvvKhvKSNAIV~ak~~~tvGiGaGQ~sRVds~~iA 529 (600)
++|++. .-|+++++||| +|++||+|.|.|...---+++
T Consensus 3 ~d~~K~-~aa~~A~~~V~--------~gmvvGlGTGSTv~~~I~~L~ 40 (226)
T 3ixq_A 3 NEDLKL-KVAKEAVKLVK--------DGMVIGLGTGSTAALFIRELG 40 (226)
T ss_dssp CHHHHH-HHHHHHGGGCC--------TTCEEEECCSHHHHHHHHHHH
T ss_pred HHHHHH-HHHHHHHHhCC--------CCCEEEeCcHHHHHHHHHHHH
Confidence 344443 46999999986 578999999988774433444
No 39
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=53.92 E-value=46 Score=31.72 Aligned_cols=130 Identities=16% Similarity=0.166 Sum_probs=65.8
Q ss_pred cEEEEEecCcccHHHHHHHHHHcCcEEEEechhHHHHHHCCCeeEEecccCCCCCCCCCcccccccccccccccCCCCHH
Q 007518 76 KQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLENAGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKH 155 (600)
Q Consensus 76 ~rALISVsDK~glv~~Ak~L~~lGfeIiATgGTAk~L~e~GI~v~~VskiTGfPEildGRVKTLHPkIhGGILarr~~~~ 155 (600)
|++||+....-==..+|+.|.+.|++++.++-....+++.- ..+.+. + -++++.. +.++-.+++
T Consensus 11 k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~---~~l~~~-~----~~~~~~~--------~~~D~~~~~ 74 (267)
T 3t4x_A 11 KTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETI---KEIRAQ-Y----PDAILQP--------VVADLGTEQ 74 (267)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH---HHHHHH-C----TTCEEEE--------EECCTTSHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---HHHHhh-C----CCceEEE--------EecCCCCHH
Confidence 57898877543336789999999999999876655444310 000000 0 0112211 112223345
Q ss_pred hHHHHHHcCCCceeEEEEeccCcHHhhhcCCCCChhhhhhc--cccch-HHHHHHHHH-----CCCCEEEEeCCCCH
Q 007518 156 HMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIEN--IDIGG-PAMIRAAAK-----NHKDVLVVVGSEDY 224 (600)
Q Consensus 156 h~~~l~~~~I~~IDlVVVNLYPFe~tv~~~~~~~~ee~IEn--IDIGG-psmiRAAAK-----N~~~V~Vv~dP~DY 224 (600)
.++++.+. .++||+||.|-=.+...--. ..+.++.-+. +..-| .-|+|++.+ +..+++.+++..-|
T Consensus 75 ~~~~~~~~-~g~id~lv~nAg~~~~~~~~--~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~ 148 (267)
T 3t4x_A 75 GCQDVIEK-YPKVDILINNLGIFEPVEYF--DIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAAI 148 (267)
T ss_dssp HHHHHHHH-CCCCSEEEECCCCCCCCCGG--GSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEECCGGGT
T ss_pred HHHHHHHh-cCCCCEEEECCCCCCCCccc--cCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcchhhc
Confidence 55554432 46899999986432210000 2234443333 33344 345566654 34567667665433
No 40
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=53.64 E-value=7.4 Score=37.53 Aligned_cols=35 Identities=17% Similarity=0.315 Sum_probs=22.5
Q ss_pred chHHHHHHCCCeEEecCCCCCCchHHHHHHHhcCcEEE
Q 007518 554 DAVEEACENGIGVIAEPGGSIRDGDAIDCCNKYGVALL 591 (600)
Q Consensus 554 D~ve~Aa~aGi~aIIQPGGSiRD~evI~aa~e~giaMv 591 (600)
|-++.|.++|+..|+-|+ -|.+++++|+++|+.++
T Consensus 79 d~~~~A~~aGAd~v~~p~---~d~~v~~~~~~~g~~~i 113 (214)
T 1wbh_A 79 QQLAEVTEAGAQFAISPG---LTEPLLKAATEGTIPLI 113 (214)
T ss_dssp HHHHHHHHHTCSCEEESS---CCHHHHHHHHHSSSCEE
T ss_pred HHHHHHHHcCCCEEEcCC---CCHHHHHHHHHhCCCEE
Confidence 666666666666666653 26666666666666654
No 41
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=53.48 E-value=13 Score=33.35 Aligned_cols=36 Identities=17% Similarity=0.221 Sum_probs=29.4
Q ss_pred chHHHHHHCCCeEE-ecCCCCCCchHHHHHHHhcCcEEE
Q 007518 554 DAVEEACENGIGVI-AEPGGSIRDGDAIDCCNKYGVALL 591 (600)
Q Consensus 554 D~ve~Aa~aGi~aI-IQPGGSiRD~evI~aa~e~giaMv 591 (600)
+.++.+.++|+++| +|+|+. .+|+.++|.++||.++
T Consensus 85 ~v~~~~~~~g~~~i~i~~~~~--~~~l~~~a~~~Gi~~i 121 (145)
T 2duw_A 85 GVAQEAIAIGAKTLWLQLGVI--NEQAAVLAREAGLSVV 121 (145)
T ss_dssp HHHHHHHHHTCCEEECCTTCC--CHHHHHHHHTTTCEEE
T ss_pred HHHHHHHHcCCCEEEEcCChH--HHHHHHHHHHcCCEEE
Confidence 56777888998864 577544 8999999999999887
No 42
>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*
Probab=53.19 E-value=37 Score=32.06 Aligned_cols=35 Identities=14% Similarity=0.139 Sum_probs=25.7
Q ss_pred cEEEEEecCcccHHHHHHHHHHcCcEEEEechhHH
Q 007518 76 KQALISLSDKKDLASLGIGLQELGYTIVSTGGTAT 110 (600)
Q Consensus 76 ~rALISVsDK~glv~~Ak~L~~lGfeIiATgGTAk 110 (600)
|++||+-...-==..+|+.|.+.|++++.+.-...
T Consensus 2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~ 36 (254)
T 1zmt_A 2 STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFK 36 (254)
T ss_dssp CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGG
T ss_pred eEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 46777776543336899999999999999865443
No 43
>1z3a_A TRNA-specific adenosine deaminase; tRNA adenosine deaminase, dimer, zinc, metalloenzyme, structural genomics, PSI, protein structure initiative; 2.03A {Escherichia coli} SCOP: c.97.1.2 PDB: 3ocq_A
Probab=52.69 E-value=29 Score=32.42 Aligned_cols=62 Identities=21% Similarity=0.334 Sum_probs=47.0
Q ss_pred EEEEEeCCeEEEecCCCCcH-----HHHHHHHHHHcCC-----ccCceEEeecccccCCccchHHHHHHCCCeEEe
Q 007518 503 AIVIAKNNCMLGMGSGQPNR-----RESLRIAMKKAGD-----EVKGAALASDAFFPFAWKDAVEEACENGIGVIA 568 (600)
Q Consensus 503 AIV~ak~~~tvGiGaGQ~sR-----Vds~~iA~~kA~~-----~~~GavlASDAFFPF~~~D~ve~Aa~aGi~aII 568 (600)
|+++ +||+.||.|.-+.+. ..|-..|+.+|.. ++.|+.|-. -..|=+ -+......+||+.|+
T Consensus 33 AviV-~~g~Ii~~G~N~~~~~~d~t~HAE~~Ai~~a~~~~~~~~l~~~tlYv-TlEPC~--mC~~ai~~agi~rVv 104 (168)
T 1z3a_A 33 AVLV-HNNRVIGEGWNRPIGRHDPTAHAEIMALRQGGLVMQNYRLIDATLYV-TLEPCV--MCAGAMIHSRIGRVV 104 (168)
T ss_dssp EEEE-ETTEEEEEEECCHHHHTCTTCCHHHHHHHHHHHHHTSSCCTTCEEEE-EECCCH--HHHHHHHHHTCSEEE
T ss_pred EEEE-ECCEEEEEEEcccccCCCcchhHHHHHHHHHHHHcCCCcccccEEEE-cCCCcH--HHHHHHHHHCcCEEE
Confidence 5555 899999999877654 4666777777743 467887765 245877 899999999999887
No 44
>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=52.23 E-value=48 Score=31.00 Aligned_cols=34 Identities=15% Similarity=0.103 Sum_probs=25.4
Q ss_pred CCCcEEEEEecCcccHHHHHHHHHHcCcEEEEec
Q 007518 73 QANKQALISLSDKKDLASLGIGLQELGYTIVSTG 106 (600)
Q Consensus 73 ~~i~rALISVsDK~glv~~Ak~L~~lGfeIiATg 106 (600)
..-+++||+....-==..+|+.|.+.|++++.+.
T Consensus 11 ~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~ 44 (256)
T 3ezl_A 11 MSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGC 44 (256)
T ss_dssp --CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEE
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEe
Confidence 4557899988754333688999999999999865
No 45
>2pln_A HP1043, response regulator; signaling protein; 1.80A {Helicobacter pylori} PDB: 2hqo_A
Probab=52.10 E-value=96 Score=25.33 Aligned_cols=40 Identities=13% Similarity=0.088 Sum_probs=26.9
Q ss_pred CCCcEEEEEecCcccHHHHHHHHHHcCcEEEEechhHHHH
Q 007518 73 QANKQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSL 112 (600)
Q Consensus 73 ~~i~rALISVsDK~glv~~Ak~L~~lGfeIiATgGTAk~L 112 (600)
....++||--.|..-...+.+.|...||++.........|
T Consensus 16 ~~~~~ilivdd~~~~~~~l~~~L~~~g~~v~~~~~~~~al 55 (137)
T 2pln_A 16 RGSMRVLLIEKNSVLGGEIEKGLNVKGFMADVTESLEDGE 55 (137)
T ss_dssp TTCSEEEEECSCHHHHHHHHHHHHHTTCEEEEESCHHHHH
T ss_pred CCCCeEEEEeCCHHHHHHHHHHHHHcCcEEEEeCCHHHHH
Confidence 4556777755566667777788888899887654433333
No 46
>3hdv_A Response regulator; PSI-II, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.09A {Pseudomonas putida} SCOP: c.23.1.0
Probab=50.58 E-value=1e+02 Score=25.10 Aligned_cols=38 Identities=16% Similarity=0.172 Sum_probs=25.0
Q ss_pred CcEEEEEecCcccHHHHHHHHHHcCcEEEEechhHHHH
Q 007518 75 NKQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSL 112 (600)
Q Consensus 75 i~rALISVsDK~glv~~Ak~L~~lGfeIiATgGTAk~L 112 (600)
..++||--.|..-...+.+.|.+.||++.........+
T Consensus 7 ~~~ilivdd~~~~~~~l~~~L~~~g~~v~~~~~~~~a~ 44 (136)
T 3hdv_A 7 RPLVLVVDDNAVNREALILYLKSRGIDAVGADGAEEAR 44 (136)
T ss_dssp CCEEEEECSCHHHHHHHHHHHHHTTCCEEEESSHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHHcCceEEEeCCHHHHH
Confidence 45676655566666677777888888887765544433
No 47
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=50.48 E-value=45 Score=31.62 Aligned_cols=34 Identities=12% Similarity=0.083 Sum_probs=26.2
Q ss_pred CcEEEEEecCcccHHHHHHHHHHcCcEEEEechh
Q 007518 75 NKQALISLSDKKDLASLGIGLQELGYTIVSTGGT 108 (600)
Q Consensus 75 i~rALISVsDK~glv~~Ak~L~~lGfeIiATgGT 108 (600)
-+++||+....-=-..+|+.|.+.|++++.++-.
T Consensus 7 ~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~ 40 (252)
T 3h7a_A 7 NATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRN 40 (252)
T ss_dssp SCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 3578998875433368899999999999988643
No 48
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=48.71 E-value=25 Score=34.87 Aligned_cols=49 Identities=14% Similarity=0.174 Sum_probs=37.2
Q ss_pred cEEEEE-ec---CcccHHHHHHHHHHcCcEE--EEechhHHHHHHCCCeeEEecc
Q 007518 76 KQALIS-LS---DKKDLASLGIGLQELGYTI--VSTGGTATSLENAGVSVTKVEQ 124 (600)
Q Consensus 76 ~rALIS-Vs---DK~glv~~Ak~L~~lGfeI--iATgGTAk~L~e~GI~v~~Vsk 124 (600)
+|+|+. .. +-..++.+++.|.+.|+++ ++++.....++..|+++..+..
T Consensus 16 MrIl~~~~~~~gh~~~~~~La~~L~~~GheV~v~~~~~~~~~~~~~G~~~~~~~~ 70 (398)
T 4fzr_A 16 MRILVIAGCSEGFVMPLVPLSWALRAAGHEVLVAASENMGPTVTGAGLPFAPTCP 70 (398)
T ss_dssp CEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEEEGGGHHHHHHTTCCEEEEES
T ss_pred eEEEEEcCCCcchHHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHhCCCeeEecCC
Confidence 455544 33 4566889999999999875 5667777889999999888763
No 49
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=48.40 E-value=10 Score=36.97 Aligned_cols=35 Identities=17% Similarity=0.293 Sum_probs=24.2
Q ss_pred chHHHHHHCCCeEEecCCCCCCchHHHHHHHhcCcEEE
Q 007518 554 DAVEEACENGIGVIAEPGGSIRDGDAIDCCNKYGVALL 591 (600)
Q Consensus 554 D~ve~Aa~aGi~aIIQPGGSiRD~evI~aa~e~giaMv 591 (600)
|-++.|.++|+..|+-|+ -|.+++++|+++|+.++
T Consensus 89 d~~~~A~~aGAd~v~~p~---~d~~v~~~~~~~g~~~i 123 (225)
T 1mxs_A 89 SMFAAVEAAGAQFVVTPG---ITEDILEAGVDSEIPLL 123 (225)
T ss_dssp HHHHHHHHHTCSSEECSS---CCHHHHHHHHHCSSCEE
T ss_pred HHHHHHHHCCCCEEEeCC---CCHHHHHHHHHhCCCEE
Confidence 677777777777777663 26777777777776665
No 50
>1p6o_A Cytosine deaminase; hydrolase, dimer, inhibitor bound; 1.14A {Saccharomyces cerevisiae} SCOP: c.97.1.2 PDB: 1ox7_A 1rb7_A 1ysd_A 1ysb_A 2o3k_A 1uaq_A
Probab=48.34 E-value=34 Score=31.61 Aligned_cols=85 Identities=14% Similarity=0.138 Sum_probs=59.3
Q ss_pred EEEE-EeCCeEEEecCCCCcH-----HHHHHHHHHHcCC----ccCceEEeecccccCCccchHHHHHHCCCeEEecCCC
Q 007518 503 AIVI-AKNNCMLGMGSGQPNR-----RESLRIAMKKAGD----EVKGAALASDAFFPFAWKDAVEEACENGIGVIAEPGG 572 (600)
Q Consensus 503 AIV~-ak~~~tvGiGaGQ~sR-----Vds~~iA~~kA~~----~~~GavlASDAFFPF~~~D~ve~Aa~aGi~aIIQPGG 572 (600)
|+++ .+||++||.|.-+.+. ..|-..|+.+|.. .++|+.|-.- ..|=. -+.....++||+.|+=- -
T Consensus 38 AviVd~~~g~Ii~~G~N~~~~~~~~t~HAE~~Ai~~a~~~~~~~~~~~tlYvT-~EPC~--mC~~ai~~agi~rVv~g-~ 113 (161)
T 1p6o_A 38 GCLINNKDGSVLGRGHNMRFQKGSATLHGEISTLENCGRLEGKVYKDTTLYTT-LSPCD--MCTGAIIMYGIPRCVVG-E 113 (161)
T ss_dssp EEEEETTTCCEEEEEECCHHHHTCSSCCHHHHHHHHHCSCCHHHHTTEEEEEE-ECCCH--HHHHHHHHHTCCEEEEE-E
T ss_pred EEEEEecCCEEEEEEECCCCCCCCcccCHHHHHHHHHHHhCCccccccccccC-CCCCH--HHHHHHHHhCCCEEEEE-e
Confidence 5555 3999999999876553 5788889999976 3678887754 35777 88999999999988741 0
Q ss_pred CCCch-HHHHHHHhcCcEEE
Q 007518 573 SIRDG-DAIDCCNKYGVALL 591 (600)
Q Consensus 573 SiRD~-evI~aa~e~giaMv 591 (600)
+-.+. ..++.-.++||.+.
T Consensus 114 ~~~~~g~~~~~l~~~gi~v~ 133 (161)
T 1p6o_A 114 NVNFKSKGEKYLQTRGHEVV 133 (161)
T ss_dssp SSSCCCTHHHHHHHTTCEEE
T ss_pred cCCCCccHHHHHHhcCCEEE
Confidence 10111 14566677888765
No 51
>1vq2_A DCMP deaminase, deoxycytidylate deaminase; hydrolase; HET: DDN; 2.20A {Enterobacteria phage T4} SCOP: c.97.1.2
Probab=46.60 E-value=25 Score=33.18 Aligned_cols=66 Identities=17% Similarity=0.219 Sum_probs=44.9
Q ss_pred HHHHHHHHHHc---CCccCceEEeecccccCCccchHHHHHHCCCeEEecCCCCCCchHH--HHHHHhcCcEEEe
Q 007518 523 RESLRIAMKKA---GDEVKGAALASDAFFPFAWKDAVEEACENGIGVIAEPGGSIRDGDA--IDCCNKYGVALLL 592 (600)
Q Consensus 523 Vds~~iA~~kA---~~~~~GavlASDAFFPF~~~D~ve~Aa~aGi~aIIQPGGSiRD~ev--I~aa~e~giaMvf 592 (600)
+.|-..|+.+| +.+++|+.|-.- .||=. -+.....++||+.|+=- -...+..- ++.-.+.||.+..
T Consensus 103 ~HAE~~AI~~a~~~g~~~~g~tLYvT-~ePC~--~Ca~aIi~aGI~rVvy~-~~~~~~~~~~~~~l~~aGI~v~~ 173 (193)
T 1vq2_A 103 IHAELNAILFAAENGSSIEGATMYVT-LSPCP--DCAKAIAQSGIKKLVYC-ETYDKNKPGWDDILRNAGIEVFN 173 (193)
T ss_dssp BCHHHHHHHHHHHHTCCCTTCEEEEE-ECCCH--HHHHHHHHHTCCEEEEE-ECCTTCCTTTTHHHHHTTCEEEE
T ss_pred CCHHHHHHHHHHhcCCCcCCeEEEEe-CCCcH--HHHHHHHHhCCCEEEEe-cCCCCcchHHHHHHHHCCCEEEE
Confidence 35556677777 557888887654 46888 99999999999998842 11111112 4677888888764
No 52
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=45.61 E-value=94 Score=29.85 Aligned_cols=123 Identities=15% Similarity=0.091 Sum_probs=69.0
Q ss_pred cEEEEEecCcccHHHHHHHHHHcCcEEEEechhHHHHHHCCCeeEEecccCCCCCCCCCcccccccccccccccCCCCHH
Q 007518 76 KQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLENAGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKH 155 (600)
Q Consensus 76 ~rALISVsDK~glv~~Ak~L~~lGfeIiATgGTAk~L~e~GI~v~~VskiTGfPEildGRVKTLHPkIhGGILarr~~~~ 155 (600)
+++||+....-=-..+|+.|.+.|++++.+.-+...+++. +.+ +++++..+ -++=.+++
T Consensus 17 k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~------~~~-------~~~~~~~~--------~~Dl~d~~ 75 (291)
T 3rd5_A 17 RTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAA------ART-------MAGQVEVR--------ELDLQDLS 75 (291)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH------HTT-------SSSEEEEE--------ECCTTCHH
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHH------HHH-------hcCCeeEE--------EcCCCCHH
Confidence 5799998764333688999999999999998776666542 011 13343322 12223455
Q ss_pred hHHHHHHcCCCceeEEEEeccCcHHhhhcCCCCChhhhhhccccchH-HHHHHHHHCCC-CEEEEeCCC
Q 007518 156 HMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGP-AMIRAAAKNHK-DVLVVVGSE 222 (600)
Q Consensus 156 h~~~l~~~~I~~IDlVVVNLYPFe~tv~~~~~~~~ee~IEnIDIGGp-smiRAAAKN~~-~V~Vv~dP~ 222 (600)
.++++.+. +++||+||.|-=.+....... .-++++.+ ++..-|+ -+++++.+... +|+.+++..
T Consensus 76 ~v~~~~~~-~~~iD~lv~nAg~~~~~~~~~-~~~~~~~~-~vN~~g~~~l~~~~~~~~~~riv~isS~~ 141 (291)
T 3rd5_A 76 SVRRFADG-VSGADVLINNAGIMAVPYALT-VDGFESQI-GTNHLGHFALTNLLLPRLTDRVVTVSSMA 141 (291)
T ss_dssp HHHHHHHT-CCCEEEEEECCCCCSCCCCBC-TTSCBHHH-HHHTHHHHHHHHHHGGGEEEEEEEECCGG
T ss_pred HHHHHHHh-cCCCCEEEECCcCCCCcccCC-HHHHHHHH-HHHHHHHHHHHHHHHHHHHhheeEeechh
Confidence 56555443 378999999864332110000 11223332 3444454 56777777655 455555544
No 53
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=45.55 E-value=1.4e+02 Score=27.78 Aligned_cols=38 Identities=16% Similarity=0.105 Sum_probs=27.9
Q ss_pred cEEEEEecCcccHHHHHHHHHHcCcEEEEechhHHHHH
Q 007518 76 KQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLE 113 (600)
Q Consensus 76 ~rALISVsDK~glv~~Ak~L~~lGfeIiATgGTAk~L~ 113 (600)
+++||+-...-=-..+++.|.+.|++++.+.-....++
T Consensus 15 k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~ 52 (266)
T 1xq1_A 15 KTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELN 52 (266)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 57888877433236789999999999999876554443
No 54
>3fok_A Uncharacterized protein CGL0159; CGL0159 ,brevibacterium flavum., structural genomics, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum}
Probab=45.50 E-value=37 Score=35.15 Aligned_cols=92 Identities=15% Similarity=0.233 Sum_probs=60.0
Q ss_pred ceEEEEEeCCe---EEEecCCCC---cHHHHHHHHHHHc---CC-----------------ccCce-EEeeccc------
Q 007518 501 SNAIVIAKNNC---MLGMGSGQP---NRRESLRIAMKKA---GD-----------------EVKGA-ALASDAF------ 547 (600)
Q Consensus 501 SNAIV~ak~~~---tvGiGaGQ~---sRVds~~iA~~kA---~~-----------------~~~Ga-vlASDAF------ 547 (600)
-++++++-|.- .+|+|.|.+ +|.+-++..+... |- .+.|. |+.|=.-
T Consensus 42 gr~~Iva~DH~arg~lgv~~~p~~m~~~~~~l~~~~~~~~~~Gvdavl~~~gi~~d~~Li~~L~~~tv~gs~~~ggl~g~ 121 (307)
T 3fok_A 42 GKLFIVAADHPARGALAVGDNETAMANRYELLERMAIALSRPGVDGVLGTPDIIDDLAALGLLDDKIVVGSMNRGGLRGA 121 (307)
T ss_dssp CCEEEEECCSGGGTCCCSSSSSSSSSCHHHHHHHHHHHHHSTTCCEEEECHHHHHHHHHTTCCTTCEEEEECCCCSCTTC
T ss_pred CcEEEEECCCCccccCccCCCccccccHHHHHHHHHHHHhccCCCEEEECcchhhcccceEEecCcccccccCccccccC
Confidence 57888888852 588998887 8888877655443 21 24554 3442222
Q ss_pred -ccCC--ccc-hHHHHHHCCCeEEe-----cCCCCCCch------HHHHHHHhcCcEEEe
Q 007518 548 -FPFA--WKD-AVEEACENGIGVIA-----EPGGSIRDG------DAIDCCNKYGVALLL 592 (600)
Q Consensus 548 -FPF~--~~D-~ve~Aa~aGi~aII-----QPGGSiRD~------evI~aa~e~giaMvf 592 (600)
||.+ .-- +||.|.+.|..++- -||..--++ ++++.|+++||+++.
T Consensus 122 ~~~~d~~~~~~sVe~AvrlGADaV~~l~~i~~Gs~~e~~~l~~la~vv~ea~~~GlP~~~ 181 (307)
T 3fok_A 122 SFEMDDRYTGYNVSSMVDRGVDFAKTLVRINLSDAGTAPTLEATAHAVNEAAAAQLPIML 181 (307)
T ss_dssp TTTTSCCCCSCCHHHHHHHTCCEEEEEEEECTTCTTHHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred CCCccccccccCHHHHHHCCCCEEEEEEEECCCChhHHHHHHHHHHHHHHHHHcCCcEEE
Confidence 5554 001 79999999988843 677542221 578899999998664
No 55
>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}
Probab=45.32 E-value=56 Score=30.56 Aligned_cols=39 Identities=21% Similarity=0.194 Sum_probs=26.9
Q ss_pred cEEEEEecCcccHHHHHHHHHHcCcEEEEe-c--hhHHHHHH
Q 007518 76 KQALISLSDKKDLASLGIGLQELGYTIVST-G--GTATSLEN 114 (600)
Q Consensus 76 ~rALISVsDK~glv~~Ak~L~~lGfeIiAT-g--GTAk~L~e 114 (600)
|++||+-...-==..+|+.|.+.|++++.+ . -....+++
T Consensus 2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~ 43 (244)
T 1zmo_A 2 VIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQR 43 (244)
T ss_dssp CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHH
Confidence 456776654333368899999999999998 5 45544443
No 56
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=45.32 E-value=64 Score=30.25 Aligned_cols=38 Identities=13% Similarity=-0.032 Sum_probs=28.2
Q ss_pred CcEEEEEecCcccHHHHHHHHHHcCcEEEEechhHHHH
Q 007518 75 NKQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSL 112 (600)
Q Consensus 75 i~rALISVsDK~glv~~Ak~L~~lGfeIiATgGTAk~L 112 (600)
-+++||+....-=-..+|+.|.+.|++++.+.-....+
T Consensus 16 ~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~ 53 (278)
T 2bgk_A 16 DKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHG 53 (278)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHH
Confidence 36799988754333678999999999999986654444
No 57
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=45.28 E-value=1.5e+02 Score=28.80 Aligned_cols=32 Identities=16% Similarity=0.068 Sum_probs=25.2
Q ss_pred cEEEEEecCcccHHHHHHHHHHcCcEEEEech
Q 007518 76 KQALISLSDKKDLASLGIGLQELGYTIVSTGG 107 (600)
Q Consensus 76 ~rALISVsDK~glv~~Ak~L~~lGfeIiATgG 107 (600)
|++||+-...-==..+|+.|.+.|++++.+.-
T Consensus 50 k~vlVTGas~GIG~aia~~la~~G~~V~~~~~ 81 (294)
T 3r3s_A 50 RKALVTGGDSGIGRAAAIAYAREGADVAINYL 81 (294)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence 67999988643346889999999999988643
No 58
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=44.20 E-value=1.2e+02 Score=28.82 Aligned_cols=34 Identities=18% Similarity=0.172 Sum_probs=24.3
Q ss_pred CcEEEEEecCcccHHHHHHHHHHcCcEEEEechh
Q 007518 75 NKQALISLSDKKDLASLGIGLQELGYTIVSTGGT 108 (600)
Q Consensus 75 i~rALISVsDK~glv~~Ak~L~~lGfeIiATgGT 108 (600)
-+++||+...--=--.+++.|.+.|++++.+.-.
T Consensus 11 ~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~ 44 (342)
T 1y1p_A 11 GSLVLVTGANGFVASHVVEQLLEHGYKVRGTARS 44 (342)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3579998763222246789999999999987543
No 59
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=43.54 E-value=37 Score=31.97 Aligned_cols=103 Identities=9% Similarity=-0.038 Sum_probs=55.9
Q ss_pred EEEEEecCcccHHHHHHHHHHcCcEEEEechhHHHHHHCCCeeEEecccCCCCCCCCCcccccccccccccccCCCCHHh
Q 007518 77 QALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLENAGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKHH 156 (600)
Q Consensus 77 rALISVsDK~glv~~Ak~L~~lGfeIiATgGTAk~L~e~GI~v~~VskiTGfPEildGRVKTLHPkIhGGILarr~~~~h 156 (600)
++||+...--=--.+++.|.+.|++++++.- . . | +-.+++.
T Consensus 7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r-----------------~------------------~-~---D~~d~~~ 47 (287)
T 3sc6_A 7 RVIITGANGQLGKQLQEELNPEEYDIYPFDK-----------------K------------------L-L---DITNISQ 47 (287)
T ss_dssp EEEEESTTSHHHHHHHHHSCTTTEEEEEECT-----------------T------------------T-S---CTTCHHH
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCEEEEecc-----------------c------------------c-c---CCCCHHH
Confidence 7888876321124567888888888888754 0 0 1 1123344
Q ss_pred HHH-HHHcCCCceeEEEEeccCcHHhhhcCCCCChhhhhhccccchHHHHHHHHHCCCCEEEEeCCCCH
Q 007518 157 MDA-LSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGPAMIRAAAKNHKDVLVVVGSEDY 224 (600)
Q Consensus 157 ~~~-l~~~~I~~IDlVVVNLYPFe~tv~~~~~~~~ee~IEnIDIGGpsmiRAAAKN~~~V~Vv~dP~DY 224 (600)
+++ +++. .+|.||.+.-+...... ..+.++.++.-=.|--.++++|.++-.+++.+++..-|
T Consensus 48 ~~~~~~~~---~~d~vi~~a~~~~~~~~---~~~~~~~~~~n~~~~~~l~~~~~~~~~~~v~~SS~~vy 110 (287)
T 3sc6_A 48 VQQVVQEI---RPHIIIHCAAYTKVDQA---EKERDLAYVINAIGARNVAVASQLVGAKLVYISTDYVF 110 (287)
T ss_dssp HHHHHHHH---CCSEEEECCCCCCHHHH---TTCHHHHHHHHTHHHHHHHHHHHHHTCEEEEEEEGGGS
T ss_pred HHHHHHhc---CCCEEEECCcccChHHH---hcCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEchhhhc
Confidence 443 3443 47888776544322111 12344444322235556888888766666666654434
No 60
>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=43.03 E-value=1.1e+02 Score=28.62 Aligned_cols=121 Identities=12% Similarity=0.146 Sum_probs=65.2
Q ss_pred cEEEEEecCcccHHHHHHHHHHcCcEEEEechhHHHHHHCCCeeEEecccCCCCCCCCCcccccccccccccccCCCCHH
Q 007518 76 KQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLENAGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKH 155 (600)
Q Consensus 76 ~rALISVsDK~glv~~Ak~L~~lGfeIiATgGTAk~L~e~GI~v~~VskiTGfPEildGRVKTLHPkIhGGILarr~~~~ 155 (600)
+++||+-...-==..+|+.|.+.|++++.+.-....+++.- ++ +++..+ -.+-.+++
T Consensus 7 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-------~~--------~~~~~~--------~~D~~~~~ 63 (246)
T 2ag5_A 7 KVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELE-------KY--------PGIQTR--------VLDVTKKK 63 (246)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGG-------GS--------TTEEEE--------ECCTTCHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-------hc--------cCceEE--------EeeCCCHH
Confidence 56888776543336788999999999999876665554410 10 122211 11223445
Q ss_pred hHHHHHHcCCCceeEEEEeccCcH-HhhhcCCCCChhhhhh--ccccchH-HHHHHHHH-----CCCCEEEEeCCCC
Q 007518 156 HMDALSEHGIGTFDLVVVNLYPFY-DKVTSAGGIDFEDGIE--NIDIGGP-AMIRAAAK-----NHKDVLVVVGSED 223 (600)
Q Consensus 156 h~~~l~~~~I~~IDlVVVNLYPFe-~tv~~~~~~~~ee~IE--nIDIGGp-smiRAAAK-----N~~~V~Vv~dP~D 223 (600)
.++++.+ ..++||+||.|-=... .... ..+.++.-+ ++..-|+ -|+|++.+ +..++..+++..-
T Consensus 64 ~~~~~~~-~~~~id~lv~~Ag~~~~~~~~---~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~ 136 (246)
T 2ag5_A 64 QIDQFAN-EVERLDVLFNVAGFVHHGTVL---DCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVAS 136 (246)
T ss_dssp HHHHHHH-HCSCCSEEEECCCCCCCBCGG---GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBT
T ss_pred HHHHHHH-HhCCCCEEEECCccCCCCCcc---cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechHh
Confidence 5544432 2358999998853211 0111 123333322 3445555 45676653 4567777776543
No 61
>2zay_A Response regulator receiver protein; structural genomics, NYSGXRC, target 11006U, protein structure initiative; 2.00A {Desulfuromonas acetoxidans}
Probab=42.67 E-value=1.4e+02 Score=24.54 Aligned_cols=94 Identities=14% Similarity=0.148 Sum_probs=58.8
Q ss_pred CCcEEEEEecCcccHHHHHHHHHHcCcEEEEechhHHHHHHCCCeeEEecccCCCCCCCCCcccccccccccccccCCCC
Q 007518 74 ANKQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLENAGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQ 153 (600)
Q Consensus 74 ~i~rALISVsDK~glv~~Ak~L~~lGfeIiATgGTAk~L~e~GI~v~~VskiTGfPEildGRVKTLHPkIhGGILarr~~ 153 (600)
+..++||--.|..-...+.+.|...||++.........|+.
T Consensus 7 ~~~~iLivd~~~~~~~~l~~~L~~~g~~v~~~~~~~~a~~~--------------------------------------- 47 (147)
T 2zay_A 7 KWWRIMLVDTQLPALAASISALSQEGFDIIQCGNAIEAVPV--------------------------------------- 47 (147)
T ss_dssp -CEEEEEECTTGGGGHHHHHHHHHHTEEEEEESSHHHHHHH---------------------------------------
T ss_pred CCceEEEEeCCHHHHHHHHHHHHHcCCeEEEeCCHHHHHHH---------------------------------------
Confidence 34567776567777788888888899998866543433332
Q ss_pred HHhHHHHHHcCCCceeEEEEeccCcHHhhhcCCCCChhhhhhccccchHHHHHHHHH----CCCCEEEEeCCCCHHHHHH
Q 007518 154 KHHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGPAMIRAAAK----NHKDVLVVVGSEDYPALLE 229 (600)
Q Consensus 154 ~~h~~~l~~~~I~~IDlVVVNLYPFe~tv~~~~~~~~ee~IEnIDIGGpsmiRAAAK----N~~~V~Vv~dP~DY~~vl~ 229 (600)
++++ ++|+|++++--. + ..|..++|.--+ ..-.|.++++..+.+...+
T Consensus 48 ------l~~~---~~dlii~d~~l~--------~-----------~~g~~~~~~l~~~~~~~~~pii~ls~~~~~~~~~~ 99 (147)
T 2zay_A 48 ------AVKT---HPHLIITEANMP--------K-----------ISGMDLFNSLKKNPQTASIPVIALSGRATAKEEAQ 99 (147)
T ss_dssp ------HHHH---CCSEEEEESCCS--------S-----------SCHHHHHHHHHTSTTTTTSCEEEEESSCCHHHHHH
T ss_pred ------HHcC---CCCEEEEcCCCC--------C-----------CCHHHHHHHHHcCcccCCCCEEEEeCCCCHHHHHH
Confidence 2222 469999986421 1 234555555444 2345788888888877777
Q ss_pred HHhCC
Q 007518 230 FLKGN 234 (600)
Q Consensus 230 eL~~G 234 (600)
.++.|
T Consensus 100 ~~~~g 104 (147)
T 2zay_A 100 LLDMG 104 (147)
T ss_dssp HHHHT
T ss_pred HHhCC
Confidence 66643
No 62
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=41.80 E-value=80 Score=29.67 Aligned_cols=38 Identities=18% Similarity=0.194 Sum_probs=27.9
Q ss_pred cEEEEEecCcccHHHHHHHHHHcCcEEEEechhHHHHH
Q 007518 76 KQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLE 113 (600)
Q Consensus 76 ~rALISVsDK~glv~~Ak~L~~lGfeIiATgGTAk~L~ 113 (600)
|++||+....-==..+|+.|.+.|++++.+.-....++
T Consensus 15 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~ 52 (260)
T 2zat_A 15 KVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVD 52 (260)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 57898877543336789999999999999866544443
No 63
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2
Probab=41.71 E-value=1.1e+02 Score=29.24 Aligned_cols=121 Identities=16% Similarity=0.121 Sum_probs=61.2
Q ss_pred cEEEEEecCcccHHHHHHHHHHcCcEEEEec-----hhHHHHHHCCCeeEEecccCCCCCCCCCcccccccccccccccC
Q 007518 76 KQALISLSDKKDLASLGIGLQELGYTIVSTG-----GTATSLENAGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILAR 150 (600)
Q Consensus 76 ~rALISVsDK~glv~~Ak~L~~lGfeIiATg-----GTAk~L~e~GI~v~~VskiTGfPEildGRVKTLHPkIhGGILar 150 (600)
+++||+...--=--.+++.|.+.|++++++. +....+++ +.. .|+|.... |=|
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~----------l~~-----~~~~~~~~-----~Dl-- 59 (347)
T 1orr_A 2 AKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHW----------LSS-----LGNFEFVH-----GDI-- 59 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHH----------HHT-----TCCCEEEE-----CCT--
T ss_pred cEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhh----------hcc-----CCceEEEE-----cCC--
Confidence 4677776522112467899999999999873 22222221 000 12232211 111
Q ss_pred CCCHHhHHHHHHcCCCceeEEEEeccCcHHhhhcCCCCChhhhhhccccch-HHHHHHHHHCCC--CEEEEeCCCCHH
Q 007518 151 RDQKHHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGG-PAMIRAAAKNHK--DVLVVVGSEDYP 225 (600)
Q Consensus 151 r~~~~h~~~l~~~~I~~IDlVVVNLYPFe~tv~~~~~~~~ee~IEnIDIGG-psmiRAAAKN~~--~V~Vv~dP~DY~ 225 (600)
.+++.++++-+. ..+|.||.+--+....... .+.++.++ +.+-| -.++++|.+... +++.+++..-|.
T Consensus 60 -~d~~~~~~~~~~--~~~d~vih~A~~~~~~~~~---~~~~~~~~-~nv~~~~~l~~a~~~~~~~~~iv~~SS~~v~g 130 (347)
T 1orr_A 60 -RNKNDVTRLITK--YMPDSCFHLAGQVAMTTSI---DNPCMDFE-INVGGTLNLLEAVRQYNSNCNIIYSSTNKVYG 130 (347)
T ss_dssp -TCHHHHHHHHHH--HCCSEEEECCCCCCHHHHH---HCHHHHHH-HHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGT
T ss_pred -CCHHHHHHHHhc--cCCCEEEECCcccChhhhh---hCHHHHHH-HHHHHHHHHHHHHHHhCCCceEEEeccHHHhC
Confidence 234445443322 1589998876543211111 13344443 44444 467888887653 576666655553
No 64
>1wkq_A Guanine deaminase; domain SWAP, the cytidine deaminase superfamily, substrate specificity, structural plasticity, hydrolase; 1.17A {Bacillus subtilis} SCOP: c.97.1.2 PDB: 1tiy_A
Probab=41.64 E-value=22 Score=33.21 Aligned_cols=77 Identities=13% Similarity=0.108 Sum_probs=53.7
Q ss_pred HHHHHHHHhh---hcceEEEEEeCCeEEEecCCCCcH-----HHHHHHHHHHcC-----CccCceEEeecccccCCccch
Q 007518 489 AEFAWLCVKH---VKSNAIVIAKNNCMLGMGSGQPNR-----RESLRIAMKKAG-----DEVKGAALASDAFFPFAWKDA 555 (600)
Q Consensus 489 L~FAwkvvKh---vKSNAIV~ak~~~tvGiGaGQ~sR-----Vds~~iA~~kA~-----~~~~GavlASDAFFPF~~~D~ 555 (600)
|..|++.... +.-=||++ +||++||.|.-+..+ ..|-..|+.+|. .++.|+.|-. -..|=+ -+
T Consensus 19 l~~A~~a~~~g~~~pVGAVIV-~~g~Ii~~G~N~~~~~~d~~~HAE~~AI~~a~~~~~~~~l~g~tlYv-T~EPC~--mC 94 (164)
T 1wkq_A 19 VTLACEGVNAGIGGPFGAVIV-KDGAIIAEGQNNVTTSNDPTAHAEVTAIRKACKVLGAYQLDDCILYT-SCEPCP--MC 94 (164)
T ss_dssp HHHHHHHHHTTSSSSCEEEEE-ETTEEEEEEECCHHHHTCTTCCHHHHHHHHHHHHHTSSSCTTEEEEE-EECCCH--HH
T ss_pred HHHHHHHHhcCCCCCEEEEEE-ECCEEEEEEecCCcCCCCcccCHHHHHHHHHHHHcCCCCcCceEEEE-eCCChH--HH
Confidence 4456665443 33336555 899999998776554 345556666664 2578988877 466888 89
Q ss_pred HHHHHHCCCeEEec
Q 007518 556 VEEACENGIGVIAE 569 (600)
Q Consensus 556 ve~Aa~aGi~aIIQ 569 (600)
......+||+.|+=
T Consensus 95 a~ai~~agI~rVv~ 108 (164)
T 1wkq_A 95 LGAIYWARPKAVFY 108 (164)
T ss_dssp HHHHHHHCCSEEEE
T ss_pred HHHHHHHCCCEEEE
Confidence 99999999998873
No 65
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=41.43 E-value=1.6e+02 Score=24.66 Aligned_cols=37 Identities=19% Similarity=0.235 Sum_probs=24.0
Q ss_pred cEEEEEecCcccHHHHHHHHHHcCcEEEEechhHHHH
Q 007518 76 KQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSL 112 (600)
Q Consensus 76 ~rALISVsDK~glv~~Ak~L~~lGfeIiATgGTAk~L 112 (600)
.++||--.|..-...+.+.|...||++.........+
T Consensus 8 ~~iLivdd~~~~~~~l~~~L~~~g~~v~~~~~~~~a~ 44 (154)
T 2rjn_A 8 YTVMLVDDEQPILNSLKRLIKRLGCNIITFTSPLDAL 44 (154)
T ss_dssp CEEEEECSCHHHHHHHHHHHHTTTCEEEEESCHHHHH
T ss_pred CeEEEEcCCHHHHHHHHHHHHHcCCeEEEeCCHHHHH
Confidence 4676655566666677777888888887655433333
No 66
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=41.20 E-value=1e+02 Score=29.34 Aligned_cols=38 Identities=18% Similarity=0.156 Sum_probs=28.6
Q ss_pred cEEEEEecCcccHHHHHHHHHHcCcEEEEechhHHHHH
Q 007518 76 KQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLE 113 (600)
Q Consensus 76 ~rALISVsDK~glv~~Ak~L~~lGfeIiATgGTAk~L~ 113 (600)
+++||+-...-==..+|+.|.+.|++++.+.-....++
T Consensus 22 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~ 59 (273)
T 1ae1_A 22 TTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELD 59 (273)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH
T ss_pred CEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 57899887543336889999999999999876555444
No 67
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=41.04 E-value=1.3e+02 Score=27.75 Aligned_cols=35 Identities=11% Similarity=0.074 Sum_probs=26.3
Q ss_pred cEEEEEecCcccHHHHHHHHHHcCcEEEEechhHH
Q 007518 76 KQALISLSDKKDLASLGIGLQELGYTIVSTGGTAT 110 (600)
Q Consensus 76 ~rALISVsDK~glv~~Ak~L~~lGfeIiATgGTAk 110 (600)
+++||+....-=-..+++.|.+.|++++.+.-...
T Consensus 14 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~ 48 (260)
T 3awd_A 14 RVAIVTGGAQNIGLACVTALAEAGARVIIADLDEA 48 (260)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 57888877533336789999999999998865443
No 68
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=40.62 E-value=99 Score=29.59 Aligned_cols=38 Identities=13% Similarity=0.087 Sum_probs=28.1
Q ss_pred cEEEEEecCcccHHHHHHHHHHcCcEEEEechhHHHHH
Q 007518 76 KQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLE 113 (600)
Q Consensus 76 ~rALISVsDK~glv~~Ak~L~~lGfeIiATgGTAk~L~ 113 (600)
+++||+-...-=-..+|+.|.+.|++++.+.-....++
T Consensus 23 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~ 60 (277)
T 2rhc_B 23 EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLR 60 (277)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 57899887543336789999999999999866544443
No 69
>1fob_A Beta-1,4-galactanase; B/A barrel, glycosyl hydrolase, family 53, CLAN GH-A; 1.80A {Aspergillus aculeatus} SCOP: c.1.8.3 PDB: 1fhl_A
Probab=40.56 E-value=34 Score=34.78 Aligned_cols=90 Identities=18% Similarity=0.246 Sum_probs=0.0
Q ss_pred CcccHHHHHHHHHHcCcEEEEe-----------------------------------chhHHHHHHCCCeeEEecccCCC
Q 007518 84 DKKDLASLGIGLQELGYTIVST-----------------------------------GGTATSLENAGVSVTKVEQLTCF 128 (600)
Q Consensus 84 DK~glv~~Ak~L~~lGfeIiAT-----------------------------------gGTAk~L~e~GI~v~~VskiTGf 128 (600)
|.+.++++++..+++|.+++=+ .-+++.|+++|+.|..|. +|-
T Consensus 58 d~~~~~~~~~~ak~~Gl~v~ld~hysd~wadP~~q~~p~~W~~~~~~~~~~~~~~yt~~v~~~l~~~g~~v~~v~--vGN 135 (334)
T 1fob_A 58 DLDYNLELAKRVKAAGMSLYLDLHLSDTWADPSDQTTPSGWSTTDLGTLKWQLYNYTLEVCNTFAENDIDIEIIS--IGN 135 (334)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSSSCCBTTBCBCCTTSCSSCHHHHHHHHHHHHHHHHHHHHHTTCCCSEEE--ESS
T ss_pred CHHHHHHHHHHHHHCCCEEEEEeccCCCCCCcccccCccccccCChHHHHHHHHHHHHHHHHHHHhCCCCCCEEE--Eee
Q ss_pred CCCCCCc-----------------------ccccc--cccccccccCCCCHHhH-------HHHHHcCCC---ceeEEEE
Q 007518 129 PEMLDGR-----------------------VKTLH--PNIHGGILARRDQKHHM-------DALSEHGIG---TFDLVVV 173 (600)
Q Consensus 129 PEildGR-----------------------VKTLH--PkIhGGILarr~~~~h~-------~~l~~~~I~---~IDlVVV 173 (600)
|+..|- ||..- |.+- |..--+++.+. ..+.++|-. .+|+|-+
T Consensus 136 -E~~~G~lwp~g~~~~~~~l~~~~~~a~~avr~~~~~p~~~--v~~h~~~~~~~~~~~~~~~~~~~~g~~~~~~~DvIG~ 212 (334)
T 1fob_A 136 -EIRAGLLWPLGETSSYSNIGALLHSGAWGVKDSNLATTPK--IMIHLDDGWSWDQQNYFYETVLATGELLSTDFDYFGV 212 (334)
T ss_dssp -SGGGCSSBTTTSTTCHHHHHHHHHHHHHHHHTSCCSSCCE--EEEEESCTTCHHHHHHHHHHHHHTSSSCGGGCCEEEE
T ss_pred -cCcccccCCCCcchhHHHHHHHHHHHHHHHHHhccCCCCe--EEEEcCCcCchHHHHHHHHHHHHcCCCCCCCcCEEEE
Q ss_pred eccCc
Q 007518 174 NLYPF 178 (600)
Q Consensus 174 NLYPF 178 (600)
|.|||
T Consensus 213 syYp~ 217 (334)
T 1fob_A 213 SYYPF 217 (334)
T ss_dssp ECCSS
T ss_pred eCCCC
No 70
>1knx_A Probable HPR(Ser) kinase/phosphatase; HPR kinase, HPR kinase/phosphatase, HPRK/P, P-loop, walker A BOX, catabolite repression; 2.50A {Mycoplasma pneumoniae} SCOP: c.98.2.1 c.91.1.2
Probab=40.38 E-value=21 Score=36.78 Aligned_cols=45 Identities=11% Similarity=0.007 Sum_probs=40.0
Q ss_pred chHHHHHHCCCeEEecCCCCCCchHHHHHHHhcCcEEEecCCccC
Q 007518 554 DAVEEACENGIGVIAEPGGSIRDGDAIDCCNKYGVALLLTSVRHF 598 (600)
Q Consensus 554 D~ve~Aa~aGi~aIIQPGGSiRD~evI~aa~e~giaMvfTg~RHF 598 (600)
..++.+...++.|||=--|---++|.+++|+|+||+++-|...-|
T Consensus 74 ~~~~~l~~~~iP~IIvtrg~~pp~elie~A~e~~ipLl~T~~~t~ 118 (312)
T 1knx_A 74 QILHNLLKLNPPAIILTKSFTDPTVLLQVNQTYQVPILKTDFFST 118 (312)
T ss_dssp TTHHHHHTTCCSCEEEETTTCCCHHHHHHGGGTCCCEEEESSCGG
T ss_pred HHHHHHhCCCCCEEEEECCCCCCHHHHHHHHHcCCEEEEeCccHH
Confidence 577888899999999999988899999999999999999987554
No 71
>3uw1_A Ribose-5-phosphate isomerase A; ssgcid, seattle structural genomics center for infectious DI isomerase, ribose isomerase; HET: R5P; 1.71A {Burkholderia thailandensis} PDB: 3u7j_A*
Probab=40.31 E-value=18 Score=36.01 Aligned_cols=72 Identities=22% Similarity=0.262 Sum_probs=45.3
Q ss_pred CCHHHHHHHHHHHHHHhhhcceEEEEEeCCeEEEecCCCCcHHHHHHHHHHHcCCccCceEEeecccccCCccchHHHHH
Q 007518 481 PQESELHDAEFAWLCVKHVKSNAIVIAKNNCMLGMGSGQPNRRESLRIAMKKAGDEVKGAALASDAFFPFAWKDAVEEAC 560 (600)
Q Consensus 481 Pt~~e~~dL~FAwkvvKhvKSNAIV~ak~~~tvGiGaGQ~sRVds~~iA~~kA~~~~~GavlASDAFFPF~~~D~ve~Aa 560 (600)
.++++++ -.-|+++++||++| ..+|++||+|+|.|-..-.-+++-. ..++.|+|=.|. .+-+.+.
T Consensus 9 m~~~~~K-~~aA~~A~~~V~d~----~~~g~vIGLGtGST~~~~i~~L~~~--~~~i~~~V~tS~--------~t~~~~~ 73 (239)
T 3uw1_A 9 MTQDELK-RLVGEAAARYVTDN----VPQGAVIGVGTGSTANCFIDALAAV--KDRYRGAVSSSV--------ATTERLK 73 (239)
T ss_dssp CCHHHHH-HHHHHHHHHHHHHH----SCTTCEEEECCSHHHHHHHHHHHTT--GGGSCEEEESSH--------HHHHHHH
T ss_pred CCHHHHH-HHHHHHHHHHhhcc----CcCCCEEEECccHHHHHHHHHHHhh--hccceEEeCCcH--------HHHHHHH
Confidence 3444444 46799999999874 3579999999997765333333322 124555553332 4667788
Q ss_pred HCCCeEE
Q 007518 561 ENGIGVI 567 (600)
Q Consensus 561 ~aGi~aI 567 (600)
+.|+.-+
T Consensus 74 ~~Gi~l~ 80 (239)
T 3uw1_A 74 SHGIRVF 80 (239)
T ss_dssp HTTCCBC
T ss_pred HcCCcEE
Confidence 8888643
No 72
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=40.25 E-value=49 Score=31.32 Aligned_cols=122 Identities=19% Similarity=0.243 Sum_probs=66.5
Q ss_pred cEEEEEecCcccHHHHHHHHHHcCcEEEEechhHHHHHHCCCeeEEecccCCCCCCCCCcccccccccccccccCCCCHH
Q 007518 76 KQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLENAGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKH 155 (600)
Q Consensus 76 ~rALISVsDK~glv~~Ak~L~~lGfeIiATgGTAk~L~e~GI~v~~VskiTGfPEildGRVKTLHPkIhGGILarr~~~~ 155 (600)
+++||+-...-==..+|+.|.+.|++++.+.-....+++. ..++.. .++++.+++- =+ .+++
T Consensus 7 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~------~~~~~~----~~~~~~~~~~-----Dv---~~~~ 68 (257)
T 3imf_A 7 KVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEA------KLEIEQ----FPGQILTVQM-----DV---RNTD 68 (257)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH------HHHHCC----STTCEEEEEC-----CT---TCHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH------HHHHHh----cCCcEEEEEc-----cC---CCHH
Confidence 5788887754333678999999999999988776666552 111111 2345544331 12 2344
Q ss_pred hHHHHHH---cCCCceeEEEEecc-----CcHHhhhcCCCCChhhhhhc--cccch-HHHHHHHHH-----C-CCCEEEE
Q 007518 156 HMDALSE---HGIGTFDLVVVNLY-----PFYDKVTSAGGIDFEDGIEN--IDIGG-PAMIRAAAK-----N-HKDVLVV 218 (600)
Q Consensus 156 h~~~l~~---~~I~~IDlVVVNLY-----PFe~tv~~~~~~~~ee~IEn--IDIGG-psmiRAAAK-----N-~~~V~Vv 218 (600)
.++++-+ ...++||+||.|-= ||++ .+.++.-+. +..-| --|+|++.+ + ..+++.+
T Consensus 69 ~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~-------~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~i 141 (257)
T 3imf_A 69 DIQKMIEQIDEKFGRIDILINNAAGNFICPAED-------LSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINM 141 (257)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGG-------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEE
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhh-------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEE
Confidence 4443321 12358999999863 4432 233333332 33344 456677643 3 4556666
Q ss_pred eCCC
Q 007518 219 VGSE 222 (600)
Q Consensus 219 ~dP~ 222 (600)
++..
T Consensus 142 sS~~ 145 (257)
T 3imf_A 142 VATY 145 (257)
T ss_dssp CCGG
T ss_pred Cchh
Confidence 6543
No 73
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=40.09 E-value=1.2e+02 Score=28.77 Aligned_cols=32 Identities=22% Similarity=0.158 Sum_probs=25.3
Q ss_pred cEEEEEecCcccHHHHHHHHHHcCcEEEEech
Q 007518 76 KQALISLSDKKDLASLGIGLQELGYTIVSTGG 107 (600)
Q Consensus 76 ~rALISVsDK~glv~~Ak~L~~lGfeIiATgG 107 (600)
+++||+....-=-..+|+.|.+.|++++.+.-
T Consensus 30 k~vlITGas~gIG~~la~~l~~~G~~V~~~~r 61 (271)
T 4iin_A 30 KNVLITGASKGIGAEIAKTLASMGLKVWINYR 61 (271)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence 57888877543336899999999999998765
No 74
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=40.05 E-value=24 Score=32.55 Aligned_cols=14 Identities=14% Similarity=0.162 Sum_probs=7.1
Q ss_pred chHHHHHHCCCeEE
Q 007518 554 DAVEEACENGIGVI 567 (600)
Q Consensus 554 D~ve~Aa~aGi~aI 567 (600)
+.++.+.+.|+..+
T Consensus 95 ~~~~~~~~~g~~vi 108 (205)
T 1wa3_A 95 EISQFCKEKGVFYM 108 (205)
T ss_dssp HHHHHHHHHTCEEE
T ss_pred HHHHHHHHcCCcEE
Confidence 45555555555444
No 75
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Probab=39.78 E-value=65 Score=30.92 Aligned_cols=123 Identities=11% Similarity=0.066 Sum_probs=68.0
Q ss_pred CcEEEEEecCcccHHHHHHHHHHcCcEEEEechhHHHHHHCCCeeEEecccCCCCCCCCCcccccccccccccccCCCCH
Q 007518 75 NKQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLENAGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQK 154 (600)
Q Consensus 75 i~rALISVsDK~glv~~Ak~L~~lGfeIiATgGTAk~L~e~GI~v~~VskiTGfPEildGRVKTLHPkIhGGILarr~~~ 154 (600)
-+++||+....-=-..+|+.|.+.|++++.+.-....|++..-. ++.. +-+ +=.++
T Consensus 16 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~----------------~~~~-----~~~---Dv~d~ 71 (266)
T 3p19_A 16 KKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALNLP----------------NTLC-----AQV---DVTDK 71 (266)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTTCCT----------------TEEE-----EEC---CTTCH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHhhcC----------------CceE-----EEe---cCCCH
Confidence 46799998754333678999999999999998877777663210 1111 111 21233
Q ss_pred HhHHHHHH---cCCCceeEEEEeccCcHHhhhcCCCCChhhhhh--ccccchH-HHHHHHH-----HCCCCEEEEeCCCC
Q 007518 155 HHMDALSE---HGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIE--NIDIGGP-AMIRAAA-----KNHKDVLVVVGSED 223 (600)
Q Consensus 155 ~h~~~l~~---~~I~~IDlVVVNLYPFe~tv~~~~~~~~ee~IE--nIDIGGp-smiRAAA-----KN~~~V~Vv~dP~D 223 (600)
+.++++-+ ...++||+||.|-=.....--. ..+.++.-+ ++..-|+ -++|++. ++..+++.+++..-
T Consensus 72 ~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~--~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~IV~isS~~~ 149 (266)
T 3p19_A 72 YTFDTAITRAEKIYGPADAIVNNAGMMLLGQID--TQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAG 149 (266)
T ss_dssp HHHHHHHHHHHHHHCSEEEEEECCCCCCCCCTT--TSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGG
T ss_pred HHHHHHHHHHHHHCCCCCEEEECCCcCCCCCcc--cCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcChhh
Confidence 44333221 1235899999986432110000 223333222 3445555 4566654 46677777777543
No 76
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=39.42 E-value=1e+02 Score=29.23 Aligned_cols=39 Identities=26% Similarity=0.167 Sum_probs=29.8
Q ss_pred cEEEEEecCcccHHHHHHHHHHcCcEEEEechhHHHHHH
Q 007518 76 KQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLEN 114 (600)
Q Consensus 76 ~rALISVsDK~glv~~Ak~L~~lGfeIiATgGTAk~L~e 114 (600)
+++||+-...-==..+|+.|.+.|++++.+.-+...+++
T Consensus 12 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~ 50 (264)
T 3ucx_A 12 KVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLED 50 (264)
T ss_dssp CEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHH
T ss_pred cEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHH
Confidence 578998876533368899999999999998776555443
No 77
>1wwr_A TRNA adenosine deaminase TADA; homodimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, hydrolase; 1.80A {Aquifex aeolicus} SCOP: c.97.1.2
Probab=39.20 E-value=59 Score=30.48 Aligned_cols=64 Identities=14% Similarity=0.125 Sum_probs=47.9
Q ss_pred EEEEEeCCeEEEecCCCCcH-----HHHHHHHHHHcCC-----ccCceEEeecccccCCccchHHHHHHCCCeEEec
Q 007518 503 AIVIAKNNCMLGMGSGQPNR-----RESLRIAMKKAGD-----EVKGAALASDAFFPFAWKDAVEEACENGIGVIAE 569 (600)
Q Consensus 503 AIV~ak~~~tvGiGaGQ~sR-----Vds~~iA~~kA~~-----~~~GavlASDAFFPF~~~D~ve~Aa~aGi~aIIQ 569 (600)
+-|+++||+.||.|.-+.+. ..|-..|+.+|.. .+.|+.|-.- ..|=+ -+......+||+.|+=
T Consensus 46 GAvIV~dg~Ii~~G~N~~~~~~d~t~HAE~~AI~~a~~~~g~~~l~~~tlYvT-~EPC~--mC~~ai~~agi~rVv~ 119 (171)
T 1wwr_A 46 GAIIVKEGEIISKAHNSVEELKDPTAHAEMLAIKEACRRLNTKYLEGCELYVT-LEPCI--MCSYALVLSRIEKVIF 119 (171)
T ss_dssp EEEEEETTEEEEEEECCHHHHTCTTCCHHHHHHHHHHHHHTCSCCTTEEEEES-SCCBH--HHHHHHHHTTCSEEEE
T ss_pred EEEEEECCEEEEEEECCCCccCCcccCHHHHHHHHHHHHcCCCccCceEEEEC-CCChH--HHHHHHHHHCCCEEEE
Confidence 34455799999999877654 4566677777643 5788887653 46887 9999999999999883
No 78
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=38.96 E-value=26 Score=34.20 Aligned_cols=134 Identities=12% Similarity=0.126 Sum_probs=75.3
Q ss_pred cccHHHHHHHHHHc-Cc-EEEEechhHHHHHHC-CCeeEEecccCCCCCCCCC--cccccccccccccccCCCCHHhHHH
Q 007518 85 KKDLASLGIGLQEL-GY-TIVSTGGTATSLENA-GVSVTKVEQLTCFPEMLDG--RVKTLHPNIHGGILARRDQKHHMDA 159 (600)
Q Consensus 85 K~glv~~Ak~L~~l-Gf-eIiATgGTAk~L~e~-GI~v~~VskiTGfPEildG--RVKTLHPkIhGGILarr~~~~h~~~ 159 (600)
=+..++.|+.+.+. |+ =|+|-|||+++|+++ +|||..|. +||| ++|.- +.|....+| |++.-.+....++.
T Consensus 48 le~av~~a~~~~~~~~~dVIISRGgta~~Lr~~~~iPVV~I~-vs~~-Dil~aL~~a~~~~~kI--avVg~~~~~~~~~~ 123 (225)
T 2pju_A 48 FEKAVTYIRKKLANERCDAIIAAGSNGAYLKSRLSVPVILIK-PSGY-DVLQFLAKAGKLTSSI--GVVTYQETIPALVA 123 (225)
T ss_dssp HHHHHHHHHHHTTTSCCSEEEEEHHHHHHHHTTCSSCEEEEC-CCHH-HHHHHHHHTTCTTSCE--EEEEESSCCHHHHH
T ss_pred HHHHHHHHHHHHhcCCCeEEEeCChHHHHHHhhCCCCEEEec-CCHH-HHHHHHHHHHhhCCcE--EEEeCchhhhHHHH
Confidence 35567778786554 57 567889999999995 78888775 3555 44331 223333444 66666666666666
Q ss_pred HHHcCCCceeEEEEeccCcHHh---hhcCCCCChhhhhhccccchHHHHHHHHHCCCCEEEEeCCCCHHHHHHHHh
Q 007518 160 LSEHGIGTFDLVVVNLYPFYDK---VTSAGGIDFEDGIENIDIGGPAMIRAAAKNHKDVLVVVGSEDYPALLEFLK 232 (600)
Q Consensus 160 l~~~~I~~IDlVVVNLYPFe~t---v~~~~~~~~ee~IEnIDIGGpsmiRAAAKN~~~V~Vv~dP~DY~~vl~eL~ 232 (600)
+.+. -.+|+.+.-...-++. +.+ -.++-++ .=|||....+.|.|.--. .|+.. + .+.+.+.|+
T Consensus 124 i~~l--l~~~i~~~~~~~~ee~~~~i~~----l~~~G~~-vVVG~~~~~~~A~~~Gl~-~vlI~-s-~eSI~~Ai~ 189 (225)
T 2pju_A 124 FQKT--FNLRLDQRSYITEEDARGQINE----LKANGTE-AVVGAGLITDLAEEAGMT-GIFIY-S-AATVRQAFS 189 (225)
T ss_dssp HHHH--HTCCEEEEEESSHHHHHHHHHH----HHHTTCC-EEEESHHHHHHHHHTTSE-EEESS-C-HHHHHHHHH
T ss_pred HHHH--hCCceEEEEeCCHHHHHHHHHH----HHHCCCC-EEECCHHHHHHHHHcCCc-EEEEC-C-HHHHHHHHH
Confidence 6542 2334544333333321 111 0011111 227887777777665544 44444 3 588877774
No 79
>2a8n_A Cytidine and deoxycytidylate deaminase; RNA editing, RNA binding protein; 1.60A {Agrobacterium tumefaciens} SCOP: c.97.1.2
Probab=38.95 E-value=46 Score=29.96 Aligned_cols=62 Identities=11% Similarity=0.148 Sum_probs=47.4
Q ss_pred EEEEEeCCeEEEecCCCCcH-----HHHHHHHHHHcCC-----ccCceEEeecccccCCccchHHHHHHCCCeEEe
Q 007518 503 AIVIAKNNCMLGMGSGQPNR-----RESLRIAMKKAGD-----EVKGAALASDAFFPFAWKDAVEEACENGIGVIA 568 (600)
Q Consensus 503 AIV~ak~~~tvGiGaGQ~sR-----Vds~~iA~~kA~~-----~~~GavlASDAFFPF~~~D~ve~Aa~aGi~aII 568 (600)
|+++ +||+.||.|.-+.+. ..|-..|+.+|.. +++|+.|-.- ..|=+ -+......+||+.|+
T Consensus 28 Aviv-~~g~Ii~~G~N~~~~~~~~~~HAE~~Ai~~a~~~~~~~~~~~~tly~T-~ePC~--mC~~ai~~~~i~rvv 99 (144)
T 2a8n_A 28 AVLV-LDGRVIARSGNRTRELNDVTAHAEIAVIRMACEALGQERLPGADLYVT-LEPCT--MCAAAISFARIRRLY 99 (144)
T ss_dssp EEEE-ETTEEEEEEECCHHHHTCTTCCHHHHHHHHHHHHHTCSCCTTCEEEEE-ECCBH--HHHHHHHHTTCSEEE
T ss_pred EEEE-ECCEEEEEEECCCCCCCCCcCCHHHHHHHHHHHHcCCCccCCeEEEEC-CCChH--HHHHHHHHHCCCEEE
Confidence 5544 699999999877654 5666777777742 5788877653 36877 999999999999988
No 80
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=38.84 E-value=69 Score=30.29 Aligned_cols=38 Identities=16% Similarity=0.106 Sum_probs=28.2
Q ss_pred cEEEEEecCcccHHHHHHHHHHcCcEEEEechhHHHHH
Q 007518 76 KQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLE 113 (600)
Q Consensus 76 ~rALISVsDK~glv~~Ak~L~~lGfeIiATgGTAk~L~ 113 (600)
+++||+....-=-..+|+.|.+.|++++.+.-....++
T Consensus 14 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~ 51 (267)
T 1iy8_A 14 RVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLE 51 (267)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 57899887543336889999999999998865554443
No 81
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=38.44 E-value=82 Score=30.09 Aligned_cols=31 Identities=19% Similarity=0.229 Sum_probs=25.0
Q ss_pred cEEEEEecCcccHHHHHHHHHHcCcEEEEec
Q 007518 76 KQALISLSDKKDLASLGIGLQELGYTIVSTG 106 (600)
Q Consensus 76 ~rALISVsDK~glv~~Ak~L~~lGfeIiATg 106 (600)
|++||+-...-==..+|+.|.+.|++++.++
T Consensus 16 k~~lVTGas~gIG~a~a~~la~~G~~V~~~~ 46 (280)
T 3pgx_A 16 RVAFITGAARGQGRSHAVRLAAEGADIIACD 46 (280)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEe
Confidence 5789988765333688999999999999874
No 82
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=38.42 E-value=1.6e+02 Score=28.04 Aligned_cols=117 Identities=10% Similarity=0.058 Sum_probs=57.0
Q ss_pred cEEEEEecCcccH--HHHHHHHHHcCcEEEEechhHHHHHHCCCeeEEecccCCCCCCCCCcccccccccccccccCCCC
Q 007518 76 KQALISLSDKKDL--ASLGIGLQELGYTIVSTGGTATSLENAGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQ 153 (600)
Q Consensus 76 ~rALISVsDK~gl--v~~Ak~L~~lGfeIiATgGTAk~L~e~GI~v~~VskiTGfPEildGRVKTLHPkIhGGILarr~~ 153 (600)
+++||+.. +|. -.+++.|.+.|+++++..-. -.+.++.+.++|... .++-.+
T Consensus 2 ~~ilVtGa--tG~iG~~l~~~L~~~g~~V~~~~r~----------------~~~~~~~~~~~~~~~--------~~D~~~ 55 (330)
T 2c20_A 2 NSILICGG--AGYIGSHAVKKLVDEGLSVVVVDNL----------------QTGHEDAITEGAKFY--------NGDLRD 55 (330)
T ss_dssp CEEEEETT--TSHHHHHHHHHHHHTTCEEEEEECC----------------SSCCGGGSCTTSEEE--------ECCTTC
T ss_pred CEEEEECC--CcHHHHHHHHHHHhCCCEEEEEeCC----------------CcCchhhcCCCcEEE--------ECCCCC
Confidence 45676655 233 35677888888887765321 011112222222211 112223
Q ss_pred HHhHHHHHHcCCCceeEEEEeccCcHHhhhcCCCCChhhhhhcccc-chHHHHHHHHHCC-CCEEEEeCCCCH
Q 007518 154 KHHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDI-GGPAMIRAAAKNH-KDVLVVVGSEDY 224 (600)
Q Consensus 154 ~~h~~~l~~~~I~~IDlVVVNLYPFe~tv~~~~~~~~ee~IEnIDI-GGpsmiRAAAKN~-~~V~Vv~dP~DY 224 (600)
++.++++-+. ..+|.||.+--+....... .+.++.++ +.+ |--.++++|.++- ++++.++...-|
T Consensus 56 ~~~~~~~~~~--~~~d~vih~a~~~~~~~~~---~~~~~~~~-~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~ 122 (330)
T 2c20_A 56 KAFLRDVFTQ--ENIEAVMHFAADSLVGVSM---EKPLQYYN-NNVYGALCLLEVMDEFKVDKFIFSSTAATY 122 (330)
T ss_dssp HHHHHHHHHH--SCEEEEEECCCCCCHHHHH---HSHHHHHH-HHHHHHHHHHHHHHHTTCCEEEEECCGGGG
T ss_pred HHHHHHHHhh--cCCCEEEECCcccCccccc---cCHHHHHH-HHhHHHHHHHHHHHHcCCCEEEEeCCceee
Confidence 4555444332 2789988876543211110 12333333 333 4456778777754 566666665544
No 83
>4eyg_A Twin-arginine translocation pathway signal; PSI-biology, MCSG, midwest center for structural genomics, transporter; HET: VNL; 1.86A {Rhodopseudomonas palustris} PDB: 4ey3_A* 3t0n_A* 4eyk_A*
Probab=38.33 E-value=24 Score=34.12 Aligned_cols=72 Identities=24% Similarity=0.262 Sum_probs=48.2
Q ss_pred HHHHHHHHHHcCCccCc---eEEeec-ccccCCccchHHHHHH-CCCeEEecCCCCCCchHHHHHHHhcCcEEEecC
Q 007518 523 RESLRIAMKKAGDEVKG---AALASD-AFFPFAWKDAVEEACE-NGIGVIAEPGGSIRDGDAIDCCNKYGVALLLTS 594 (600)
Q Consensus 523 Vds~~iA~~kA~~~~~G---avlASD-AFFPF~~~D~ve~Aa~-aGi~aIIQPGGSiRD~evI~aa~e~giaMvfTg 594 (600)
..+++.|++..+..+.| -++..| ..=|-..-..++.+.+ .||.+||-|.+|--...+.+.|++++|+||..+
T Consensus 27 ~~g~~~a~~~~~~~i~G~~i~l~~~D~~~~~~~~~~~~~~li~~~~v~~iiG~~~s~~~~~~~~~~~~~~ip~i~~~ 103 (368)
T 4eyg_A 27 DNAIKLYIKKHGDTVAGKKIEVILKDDAAIPDNTKRLAQELIVNDKVNVIAGFGITPAALAAAPLATQAKVPEIVMA 103 (368)
T ss_dssp HHHHHHHHHHHCSEETTEEEEEEEEECTTCHHHHHHHHHHHHHTSCCSEEEECSSHHHHHHHHHHHHHHTCCEEESS
T ss_pred HHHHHHHHHHcCCCCCCeEEEEEEeCCCCCHHHHHHHHHHHHhcCCcEEEECCCccHHHHHHHHHHHhCCceEEecc
Confidence 45677777776532333 333333 3333332234555665 899999999888777788899999999999875
No 84
>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2
Probab=38.26 E-value=1e+02 Score=28.96 Aligned_cols=41 Identities=12% Similarity=0.083 Sum_probs=30.6
Q ss_pred CCcEEEEEecCcccHHHHHHHHHHcCcEEEEechhHHHHHH
Q 007518 74 ANKQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLEN 114 (600)
Q Consensus 74 ~i~rALISVsDK~glv~~Ak~L~~lGfeIiATgGTAk~L~e 114 (600)
.-+++||+....-=-..+|+.|.+.|++++.+.-..+.+++
T Consensus 18 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~ 58 (249)
T 1o5i_A 18 RDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKR 58 (249)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHh
Confidence 44679998875433367899999999999998766555554
No 85
>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}
Probab=38.04 E-value=47 Score=29.65 Aligned_cols=30 Identities=10% Similarity=0.078 Sum_probs=21.1
Q ss_pred EEEEEecCcccHHHHHHHHHHcCcEEEEech
Q 007518 77 QALISLSDKKDLASLGIGLQELGYTIVSTGG 107 (600)
Q Consensus 77 rALISVsDK~glv~~Ak~L~~lGfeIiATgG 107 (600)
++||+....-=-..+++.|. .|++++.+.-
T Consensus 5 ~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r 34 (202)
T 3d7l_A 5 KILLIGASGTLGSAVKERLE-KKAEVITAGR 34 (202)
T ss_dssp EEEEETTTSHHHHHHHHHHT-TTSEEEEEES
T ss_pred EEEEEcCCcHHHHHHHHHHH-CCCeEEEEec
Confidence 58887764332356788888 8999887743
No 86
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=37.69 E-value=1.1e+02 Score=29.23 Aligned_cols=31 Identities=13% Similarity=0.209 Sum_probs=24.7
Q ss_pred cEEEEEecCcccHHHHHHHHHHcCcEEEEec
Q 007518 76 KQALISLSDKKDLASLGIGLQELGYTIVSTG 106 (600)
Q Consensus 76 ~rALISVsDK~glv~~Ak~L~~lGfeIiATg 106 (600)
+++||+-...-==..+|+.|.+.|++++.++
T Consensus 12 k~~lVTGas~GIG~a~a~~la~~G~~V~~~~ 42 (277)
T 3tsc_A 12 RVAFITGAARGQGRAHAVRMAAEGADIIAVD 42 (277)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCccHHHHHHHHHHHHcCCEEEEEe
Confidence 5789988754333688999999999999874
No 87
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=37.61 E-value=1.3e+02 Score=28.33 Aligned_cols=38 Identities=16% Similarity=0.126 Sum_probs=28.2
Q ss_pred cEEEEEecCcccHHHHHHHHHHcCcEEEEechhHHHHH
Q 007518 76 KQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLE 113 (600)
Q Consensus 76 ~rALISVsDK~glv~~Ak~L~~lGfeIiATgGTAk~L~ 113 (600)
+++||+-...-==..+|+.|.+.|++++.+.-....++
T Consensus 10 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~ 47 (260)
T 2ae2_A 10 CTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELN 47 (260)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 57899887543336789999999999999866554443
No 88
>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}
Probab=37.50 E-value=33 Score=33.74 Aligned_cols=75 Identities=20% Similarity=0.249 Sum_probs=45.6
Q ss_pred cEEEEEecCcccHHHHHHHHHHcCcEEEEechhHHHHHHCCCeeEEecccCCCCCCCCCcccccccccccccccCCCCHH
Q 007518 76 KQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLENAGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKH 155 (600)
Q Consensus 76 ~rALISVsDK~glv~~Ak~L~~lGfeIiATgGTAk~L~e~GI~v~~VskiTGfPEildGRVKTLHPkIhGGILarr~~~~ 155 (600)
|+|||+-.-+-==..+|+.|.+.|++++.++-..+.|+ +..++++... -++=.+++
T Consensus 12 K~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~----------------~~~~~~~~~~--------~~Dv~~~~ 67 (242)
T 4b79_A 12 QQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVH----------------APRHPRIRRE--------ELDITDSQ 67 (242)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTT----------------SCCCTTEEEE--------ECCTTCHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHh----------------hhhcCCeEEE--------EecCCCHH
Confidence 56888877553336788999999999988864322111 1122333332 12223466
Q ss_pred hHHHHHHcCCCceeEEEEec
Q 007518 156 HMDALSEHGIGTFDLVVVNL 175 (600)
Q Consensus 156 h~~~l~~~~I~~IDlVVVNL 175 (600)
.++++-+. ++.||++|.|-
T Consensus 68 ~v~~~~~~-~g~iDiLVNNA 86 (242)
T 4b79_A 68 RLQRLFEA-LPRLDVLVNNA 86 (242)
T ss_dssp HHHHHHHH-CSCCSEEEECC
T ss_pred HHHHHHHh-cCCCCEEEECC
Confidence 66665543 67999999883
No 89
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=37.25 E-value=1.3e+02 Score=28.52 Aligned_cols=128 Identities=16% Similarity=0.228 Sum_probs=67.2
Q ss_pred cEEEEEecCcccHHHHHHHHHHcCcEEEEechhHHHHHHCCCeeEEecccCCCCCCCCCcccccccccccccccCCCCHH
Q 007518 76 KQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLENAGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKH 155 (600)
Q Consensus 76 ~rALISVsDK~glv~~Ak~L~~lGfeIiATgGTAk~L~e~GI~v~~VskiTGfPEildGRVKTLHPkIhGGILarr~~~~ 155 (600)
|++||+-...-==..+|+.|.+.|++++.++-....+++. +.++... -.+++..+. +=+ .+++
T Consensus 11 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~------~~~l~~~---~~~~~~~~~-----~Dv---~~~~ 73 (262)
T 3pk0_A 11 RSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDAC------VADLDQL---GSGKVIGVQ-----TDV---SDRA 73 (262)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH------HHHHHTT---SSSCEEEEE-----CCT---TSHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH------HHHHHhh---CCCcEEEEE-----cCC---CCHH
Confidence 5789888754333678999999999999987665555431 1111100 012333222 112 2344
Q ss_pred hHHHHHH---cCCCceeEEEEeccCcHHhhhcCCCCChhhhhh--ccccchH-HHHHHHHH-----CCCCEEEEeCCC
Q 007518 156 HMDALSE---HGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIE--NIDIGGP-AMIRAAAK-----NHKDVLVVVGSE 222 (600)
Q Consensus 156 h~~~l~~---~~I~~IDlVVVNLYPFe~tv~~~~~~~~ee~IE--nIDIGGp-smiRAAAK-----N~~~V~Vv~dP~ 222 (600)
.++++-+ ...++||+||.|--.+...--. ..+.++.-+ ++..-|+ -++|++.+ +..+++.+++..
T Consensus 74 ~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~--~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~ 149 (262)
T 3pk0_A 74 QCDALAGRAVEEFGGIDVVCANAGVFPDAPLA--TMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSIT 149 (262)
T ss_dssp HHHHHHHHHHHHHSCCSEEEECCCCCCCCCTT--TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEEEECCSB
T ss_pred HHHHHHHHHHHHhCCCCEEEECCCCCCCCChh--hCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechh
Confidence 4433321 1235799999986432110001 234444333 3445555 46677665 456677776644
No 90
>3s99_A Basic membrane lipoprotein; ssgcid, structural genomics, SEA structural genomics center for infectious disease, adenine; HET: ADE; 2.05A {Brucella melitensis biovar abortus}
Probab=37.22 E-value=2.2e+02 Score=29.17 Aligned_cols=144 Identities=10% Similarity=0.134 Sum_probs=78.0
Q ss_pred EEEEEcCCCC--HHHHHHHhhccCCceEEEecCCCCCCceEEEEceeEEEecCCCCCCCcccceeecCCCCCHHHHHHHH
Q 007518 413 YEIVVAPSYT--EEGLEILRGKSKNLRILETKKNKKGKLSLRQVGGGWLAQDSDDLTPEDIQFKVVSEKKPQESELHDAE 490 (600)
Q Consensus 413 ~EvIIAP~f~--~eAleiL~~K~KnlRlL~~~~~~~~~~~~r~v~GG~LvQ~~D~~~~~~~~~~vVT~~~Pt~~e~~dL~ 490 (600)
+++||.++|. +..+++.++. ++++++-++... +..+...++- ..+| -.-+
T Consensus 87 ~d~Ii~~g~~~~~~~~~vA~~~-Pdv~fv~id~~~-----------------------~~~Nv~sv~~---~~~e-g~yl 138 (356)
T 3s99_A 87 NKLIFTTSFGYMDPTVKVAKKF-PDVKFEHATGYK-----------------------TADNMSAYNA---RFYE-GRYV 138 (356)
T ss_dssp CSEEEECSGGGHHHHHHHHTTC-TTSEEEEESCCC-----------------------CBTTEEEEEE---CHHH-HHHH
T ss_pred CCEEEECCHHHHHHHHHHHHHC-CCCEEEEEeccc-----------------------cCCcEEEEEe---chhH-HHHH
Confidence 6678887754 4444555554 778877654210 0112333322 2333 2334
Q ss_pred HHHHHHhhhcceEEEEEeCCeEEEecCCCCcHHHHHHHHHHHcCCccCceEEeecccccCC-ccchHHHHHHCCCeEEec
Q 007518 491 FAWLCVKHVKSNAIVIAKNNCMLGMGSGQPNRRESLRIAMKKAGDEVKGAALASDAFFPFA-WKDAVEEACENGIGVIAE 569 (600)
Q Consensus 491 FAwkvvKhvKSNAIV~ak~~~tvGiGaGQ~sRVds~~iA~~kA~~~~~GavlASDAFFPF~-~~D~ve~Aa~aGi~aIIQ 569 (600)
-++.+.+.+|+|-|-++-....- .-..|+..-+.+++.++.+.+=.+.-.-.|+-.. ..+..+...+.|+.+|.+
T Consensus 139 aG~~A~~~tk~~kIGfVgg~~~p----~v~~~~~GF~~G~k~~np~i~v~~~~~g~~~d~~kg~~~a~~l~~~G~DvIf~ 214 (356)
T 3s99_A 139 QGVIAAKMSKKGIAGYIGSVPVP----EVVQGINSFMLGAQSVNPDFRVKVIWVNSWFDPGKEADAAKALIDQGVDIITQ 214 (356)
T ss_dssp HHHHHHHHCSSCEEEEEECCCCH----HHHHHHHHHHHHHHTTCTTCEEEEEECSSSCCHHHHHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHhcCCCEEEEECCCccH----HHHHHHHHHHHHHHHHCCCCEEEEEECCCCCChHHHHHHHHHHHhCCCcEEEE
Confidence 55555566776555433221100 0012455666677766654443333333454433 112344455679999999
Q ss_pred CCCCCCchHHHHHHHhcCcEEE
Q 007518 570 PGGSIRDGDAIDCCNKYGVALL 591 (600)
Q Consensus 570 PGGSiRD~evI~aa~e~giaMv 591 (600)
-.|+. -++++|.|.|+..+
T Consensus 215 ~~d~~---Gv~~aa~e~Gv~vI 233 (356)
T 3s99_A 215 HTDST---AAIQVAHDRGIKAF 233 (356)
T ss_dssp SSSSS---HHHHHHHHTTCEEE
T ss_pred CCCch---HHHHHHHHcCCEEE
Confidence 98886 89999999998554
No 91
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=37.16 E-value=82 Score=30.38 Aligned_cols=32 Identities=19% Similarity=0.236 Sum_probs=25.3
Q ss_pred CcEEEEEecCcccHHHHHHHHHHcCcEEEEec
Q 007518 75 NKQALISLSDKKDLASLGIGLQELGYTIVSTG 106 (600)
Q Consensus 75 i~rALISVsDK~glv~~Ak~L~~lGfeIiATg 106 (600)
-+++||+-...-==..+|+.|.+.|++++.+.
T Consensus 29 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~ 60 (280)
T 4da9_A 29 RPVAIVTGGRRGIGLGIARALAASGFDIAITG 60 (280)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCeEEEEe
Confidence 35789988754333678999999999998876
No 92
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=37.02 E-value=99 Score=26.25 Aligned_cols=91 Identities=12% Similarity=0.203 Sum_probs=53.4
Q ss_pred CCCcEEEEEecCcccHHHHHHHHHHcCcEEE-EechhHHH---HHHC--CCeeEEecccCCCCCCCCC-----ccccccc
Q 007518 73 QANKQALISLSDKKDLASLGIGLQELGYTIV-STGGTATS---LENA--GVSVTKVEQLTCFPEMLDG-----RVKTLHP 141 (600)
Q Consensus 73 ~~i~rALISVsDK~glv~~Ak~L~~lGfeIi-ATgGTAk~---L~e~--GI~v~~VskiTGfPEildG-----RVKTLHP 141 (600)
.+..++||--.|..-...+.+.|.+.||+++ ......+. |++. ...+..+.- ..|+ ++| +++..+|
T Consensus 34 ~~~~~Ilivdd~~~~~~~l~~~L~~~g~~v~~~~~~~~~al~~l~~~~~~~dliilD~--~l~~-~~g~~~~~~lr~~~~ 110 (157)
T 3hzh_A 34 GIPFNVLIVDDSVFTVKQLTQIFTSEGFNIIDTAADGEEAVIKYKNHYPNIDIVTLXI--TMPK-MDGITCLSNIMEFDK 110 (157)
T ss_dssp TEECEEEEECSCHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGCCEEEECS--SCSS-SCHHHHHHHHHHHCT
T ss_pred CCceEEEEEeCCHHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhcCCCCCEEEEec--cCCC-ccHHHHHHHHHhhCC
Confidence 3445677765567777778888899999988 44333333 3444 444444432 2333 344 4566666
Q ss_pred ccccccccCCCCHHhHHHHHHcCCC
Q 007518 142 NIHGGILARRDQKHHMDALSEHGIG 166 (600)
Q Consensus 142 kIhGGILarr~~~~h~~~l~~~~I~ 166 (600)
.+.==++.....++...++.+.|+.
T Consensus 111 ~~~ii~ls~~~~~~~~~~~~~~g~~ 135 (157)
T 3hzh_A 111 NARVIMISALGKEQLVKDCLIKGAK 135 (157)
T ss_dssp TCCEEEEESCCCHHHHHHHHHTTCS
T ss_pred CCcEEEEeccCcHHHHHHHHHcCCC
Confidence 6554455555666666666666644
No 93
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=36.97 E-value=71 Score=30.06 Aligned_cols=38 Identities=24% Similarity=0.186 Sum_probs=27.9
Q ss_pred cEEEEEecCcccHHHHHHHHHHcCcEEEEechhHHHHH
Q 007518 76 KQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLE 113 (600)
Q Consensus 76 ~rALISVsDK~glv~~Ak~L~~lGfeIiATgGTAk~L~ 113 (600)
+++||+-...-==..+|+.|.+.|++++.+.-....++
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~ 45 (263)
T 3ai3_A 8 KVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLH 45 (263)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHH
Confidence 57888887543336789999999999998865544443
No 94
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=36.97 E-value=1.4e+02 Score=28.71 Aligned_cols=31 Identities=19% Similarity=0.095 Sum_probs=24.5
Q ss_pred cEEEEEecCcccHHHHHHHHHHcCcEEEEec
Q 007518 76 KQALISLSDKKDLASLGIGLQELGYTIVSTG 106 (600)
Q Consensus 76 ~rALISVsDK~glv~~Ak~L~~lGfeIiATg 106 (600)
|++||+....-==..+|+.|.+.|++++.+.
T Consensus 32 k~~lVTGas~GIG~aia~~la~~G~~V~~~~ 62 (271)
T 3v2g_A 32 KTAFVTGGSRGIGAAIAKRLALEGAAVALTY 62 (271)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEe
Confidence 5789988754333678999999999998873
No 95
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=36.92 E-value=94 Score=29.47 Aligned_cols=31 Identities=19% Similarity=0.215 Sum_probs=24.8
Q ss_pred cEEEEEecCcccHHHHHHHHHHcCcEEEEec
Q 007518 76 KQALISLSDKKDLASLGIGLQELGYTIVSTG 106 (600)
Q Consensus 76 ~rALISVsDK~glv~~Ak~L~~lGfeIiATg 106 (600)
+++||+-...-==..+|+.|.+.|++++.++
T Consensus 14 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~ 44 (278)
T 3sx2_A 14 KVAFITGAARGQGRAHAVRLAADGADIIAVD 44 (278)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCeEEEEe
Confidence 5799988754333678999999999999875
No 96
>4es6_A Uroporphyrinogen-III synthase; heme-biosynthesis, cytoplasmi; 2.22A {Pseudomonas aeruginosa}
Probab=36.64 E-value=58 Score=31.02 Aligned_cols=123 Identities=22% Similarity=0.209 Sum_probs=70.0
Q ss_pred cCcccHHHHHHHHHHcC-----cEEEEec-hhHHHHHHCCCeeEEecc-cC--CC---C------CCCCCcccccccccc
Q 007518 83 SDKKDLASLGIGLQELG-----YTIVSTG-GTATSLENAGVSVTKVEQ-LT--CF---P------EMLDGRVKTLHPNIH 144 (600)
Q Consensus 83 sDK~glv~~Ak~L~~lG-----feIiATg-GTAk~L~e~GI~v~~Vsk-iT--Gf---P------EildGRVKTLHPkIh 144 (600)
..+.++.-|.+.|.+.| ..+++-| +|++.|+++|+.+..+.+ .+ +. + ..-++|| |+|.
T Consensus 65 TS~~aV~~~~~~l~~~~~~~~~~~i~aVG~~Ta~~L~~~G~~~~~~~~~~~~e~L~~~l~~~~~~~~~~~~v--L~~r-- 140 (254)
T 4es6_A 65 VSKPAARLGLERLDRYWPQPPQQTWCSVGAATAAILEAYGLDVTYPEQGDDSEALLALPAFQDSLRVHDPKV--LIMR-- 140 (254)
T ss_dssp CSHHHHHHHHHHHHHHCSSCCSCEEEESSHHHHHHHHHHTCCEECCSSCCSHHHHHTCHHHHHHTCSSSCEE--EEEE--
T ss_pred ECHHHHHHHHHHHHHhCCCcccCEEEEECHHHHHHHHHcCCCcccCCCCCCHHHHHHhHhhcccccCCCCEE--EEEc--
Confidence 34566667777776644 5788886 899999999999877653 22 11 1 1112333 4432
Q ss_pred cccccCCCCHHhHHHHHHcCCCceeEEEEeccCcHHhhhcCCCCChhhhhhccccchHHHHHHHHHCCCCEEEEeCCCCH
Q 007518 145 GGILARRDQKHHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGPAMIRAAAKNHKDVLVVVGSEDY 224 (600)
Q Consensus 145 GGILarr~~~~h~~~l~~~~I~~IDlVVVNLYPFe~tv~~~~~~~~ee~IEnIDIGGpsmiRAAAKN~~~V~Vv~dP~DY 224 (600)
|-.+ .+.-.+.|+++|+.- ..+-+| +++.. ..+.+++.+.+ ...--+++++++|+--
T Consensus 141 -g~~~---r~~L~~~L~~~G~~v---~~~~vY---~~~~~--~~~~~~~~~~l-----------~~~~~d~v~ftS~s~v 197 (254)
T 4es6_A 141 -GEGG---REFLAERLRGQGVQV---DYLPLY---RRRAP--DYPAGELLARV-----------RAERLNGLVVSSGQGL 197 (254)
T ss_dssp -CSSC---CCHHHHHHHHTTCEE---EEEECE---EEECC--CCCTTHHHHHH-----------HHTTCCEEECCSHHHH
T ss_pred -CCcc---HHHHHHHHHHCCCEE---EEEeEE---EeeCC--CCCHHHHHHHH-----------HhCCCCEEEEcCHHHH
Confidence 2222 234456688888753 333344 23322 12222332222 2334578889999988
Q ss_pred HHHHHHHh
Q 007518 225 PALLEFLK 232 (600)
Q Consensus 225 ~~vl~eL~ 232 (600)
..+++.+.
T Consensus 198 ~~~~~~~~ 205 (254)
T 4es6_A 198 QNLYQLAA 205 (254)
T ss_dssp HHHHHHHG
T ss_pred HHHHHHhh
Confidence 87777663
No 97
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}
Probab=36.60 E-value=1.3e+02 Score=28.23 Aligned_cols=34 Identities=15% Similarity=0.094 Sum_probs=24.8
Q ss_pred cEEEEEecCcccHHHHHHHHHHcCcEEEEechhH
Q 007518 76 KQALISLSDKKDLASLGIGLQELGYTIVSTGGTA 109 (600)
Q Consensus 76 ~rALISVsDK~glv~~Ak~L~~lGfeIiATgGTA 109 (600)
|++||+-...-=-..+|+.|.+.|++++.+.-..
T Consensus 3 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~ 36 (258)
T 3a28_C 3 KVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQ 36 (258)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGG
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 4678877653323678999999999999876443
No 98
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=36.52 E-value=1.5e+02 Score=28.16 Aligned_cols=31 Identities=29% Similarity=0.275 Sum_probs=24.3
Q ss_pred cEEEEEecCcccHHHHHHHHHHcCcEEEEec
Q 007518 76 KQALISLSDKKDLASLGIGLQELGYTIVSTG 106 (600)
Q Consensus 76 ~rALISVsDK~glv~~Ak~L~~lGfeIiATg 106 (600)
|++||+-...-==..+|+.|.+.|++++.+.
T Consensus 19 k~~lVTGas~gIG~aia~~l~~~G~~V~~~~ 49 (270)
T 3is3_A 19 KVALVTGSGRGIGAAVAVHLGRLGAKVVVNY 49 (270)
T ss_dssp CEEEESCTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEc
Confidence 5789988754333678999999999998864
No 99
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=36.38 E-value=1e+02 Score=26.46 Aligned_cols=75 Identities=12% Similarity=0.108 Sum_probs=48.4
Q ss_pred CCCcEEEEEecCcccHHHHHHHHHHcCcEEEEechhH---HHHHHCCCeeEEecccCCCCCCCCCccccccccccccccc
Q 007518 73 QANKQALISLSDKKDLASLGIGLQELGYTIVSTGGTA---TSLENAGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILA 149 (600)
Q Consensus 73 ~~i~rALISVsDK~glv~~Ak~L~~lGfeIiATgGTA---k~L~e~GI~v~~VskiTGfPEildGRVKTLHPkIhGGILa 149 (600)
...++++|-..-+-| ..+|+.|.+.|++++...-.. +.|++.|+++..
T Consensus 5 ~~~~~viIiG~G~~G-~~la~~L~~~g~~v~vid~~~~~~~~~~~~g~~~i~---------------------------- 55 (140)
T 3fwz_A 5 DICNHALLVGYGRVG-SLLGEKLLASDIPLVVIETSRTRVDELRERGVRAVL---------------------------- 55 (140)
T ss_dssp CCCSCEEEECCSHHH-HHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEE----------------------------
T ss_pred cCCCCEEEECcCHHH-HHHHHHHHHCCCCEEEEECCHHHHHHHHHcCCCEEE----------------------------
Confidence 345677777776655 568899999999888775444 444555554311
Q ss_pred CCCCHHhHHHHHHcCCCceeEEEEeccCc
Q 007518 150 RRDQKHHMDALSEHGIGTFDLVVVNLYPF 178 (600)
Q Consensus 150 rr~~~~h~~~l~~~~I~~IDlVVVNLYPF 178 (600)
.+..+.+.+++.++...|+||+-+-.-
T Consensus 56 --gd~~~~~~l~~a~i~~ad~vi~~~~~~ 82 (140)
T 3fwz_A 56 --GNAANEEIMQLAHLECAKWLILTIPNG 82 (140)
T ss_dssp --SCTTSHHHHHHTTGGGCSEEEECCSCH
T ss_pred --CCCCCHHHHHhcCcccCCEEEEECCCh
Confidence 111233457788999999998865443
No 100
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=36.38 E-value=26 Score=34.98 Aligned_cols=110 Identities=19% Similarity=0.211 Sum_probs=66.1
Q ss_pred cEEEEEecCcccHHHHHHHHHHcCcEEEEechhHHHHHHCCCeeEEecccCCCCCCCCCcccccccccccccccCCCCHH
Q 007518 76 KQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLENAGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKH 155 (600)
Q Consensus 76 ~rALISVsDK~glv~~Ak~L~~lGfeIiATgGTAk~L~e~GI~v~~VskiTGfPEildGRVKTLHPkIhGGILarr~~~~ 155 (600)
|.|||+-.-+-==..+|+.|.+.|..++.++-..+.|++. +.+ ++|++..+ -++=.+++
T Consensus 30 KvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~------~~~-------~g~~~~~~--------~~Dv~~~~ 88 (273)
T 4fgs_A 30 KIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAA------IAE-------IGGGAVGI--------QADSANLA 88 (273)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH------HHH-------HCTTCEEE--------ECCTTCHH
T ss_pred CEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH------HHH-------cCCCeEEE--------EecCCCHH
Confidence 5689998754333678999999999999998887777662 222 23443322 22333455
Q ss_pred hHHHHHH---cCCCceeEEEEec-----cCcHHhhhcCCCCChhhhhh--ccccchH-HHHHHHHHCCC
Q 007518 156 HMDALSE---HGIGTFDLVVVNL-----YPFYDKVTSAGGIDFEDGIE--NIDIGGP-AMIRAAAKNHK 213 (600)
Q Consensus 156 h~~~l~~---~~I~~IDlVVVNL-----YPFe~tv~~~~~~~~ee~IE--nIDIGGp-smiRAAAKN~~ 213 (600)
+++++-+ ...++||++|.|- -||++ .+.|+.-+ ++..-|+ -|.|++.+-.+
T Consensus 89 ~v~~~~~~~~~~~G~iDiLVNNAG~~~~~~~~~-------~~~e~w~~~~~vNl~g~~~~~~~~~p~m~ 150 (273)
T 4fgs_A 89 ELDRLYEKVKAEAGRIDVLFVNAGGGSMLPLGE-------VTEEQYDDTFDRNVKGVLFTVQKALPLLA 150 (273)
T ss_dssp HHHHHHHHHHHHHSCEEEEEECCCCCCCCCTTS-------CCHHHHHHHHHHHTHHHHHHHHHHTTTEE
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhh-------ccHHHHHHHHHHHhHHHHHHHHHHHHHHh
Confidence 5554421 2346899999984 34443 33333333 3444555 66777776443
No 101
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=36.27 E-value=1.6e+02 Score=23.39 Aligned_cols=40 Identities=10% Similarity=0.067 Sum_probs=27.7
Q ss_pred CCcEEEEEecCcccHHHHHHHHHHcC-cEEEEechhHHHHHH
Q 007518 74 ANKQALISLSDKKDLASLGIGLQELG-YTIVSTGGTATSLEN 114 (600)
Q Consensus 74 ~i~rALISVsDK~glv~~Ak~L~~lG-feIiATgGTAk~L~e 114 (600)
+.++++|...-.-| ..+++.|.+.| ++++...-+...+++
T Consensus 4 ~~~~v~I~G~G~iG-~~~~~~l~~~g~~~v~~~~r~~~~~~~ 44 (118)
T 3ic5_A 4 MRWNICVVGAGKIG-QMIAALLKTSSNYSVTVADHDLAALAV 44 (118)
T ss_dssp TCEEEEEECCSHHH-HHHHHHHHHCSSEEEEEEESCHHHHHH
T ss_pred CcCeEEEECCCHHH-HHHHHHHHhCCCceEEEEeCCHHHHHH
Confidence 34578877662222 46789999999 999988766655543
No 102
>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}
Probab=36.15 E-value=38 Score=31.17 Aligned_cols=104 Identities=15% Similarity=0.142 Sum_probs=59.3
Q ss_pred cEEEEEecCcccHHHHHHHHHHcCcEEEEechhHHHHHHCCCeeEEecccCCCCCCCCCcccccccccccccccCCCCHH
Q 007518 76 KQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLENAGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKH 155 (600)
Q Consensus 76 ~rALISVsDK~glv~~Ak~L~~lGfeIiATgGTAk~L~e~GI~v~~VskiTGfPEildGRVKTLHPkIhGGILarr~~~~ 155 (600)
|++||+-...-==..+|+.|.+.|+.++.+.-... .+=.+++
T Consensus 7 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~--------------------------------------~D~~~~~ 48 (223)
T 3uce_A 7 TVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG--------------------------------------LDISDEK 48 (223)
T ss_dssp EEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT--------------------------------------CCTTCHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc--------------------------------------cCCCCHH
Confidence 56888877543336788999999999988764322 1222345
Q ss_pred hHHHHHHcCCCceeEEEEeccCcH--HhhhcCCCCChhhhhhccc--cch-HHHHHHHHHCCC---CEEEEeCC
Q 007518 156 HMDALSEHGIGTFDLVVVNLYPFY--DKVTSAGGIDFEDGIENID--IGG-PAMIRAAAKNHK---DVLVVVGS 221 (600)
Q Consensus 156 h~~~l~~~~I~~IDlVVVNLYPFe--~tv~~~~~~~~ee~IEnID--IGG-psmiRAAAKN~~---~V~Vv~dP 221 (600)
.++++-+. +++||+||.|-=.+. .... ..+.++.-+.+| .-| .-++|++.+..+ ++..+++.
T Consensus 49 ~v~~~~~~-~g~id~lv~nAg~~~~~~~~~---~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~ 118 (223)
T 3uce_A 49 SVYHYFET-IGAFDHLIVTAGSYAPAGKVV---DVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGM 118 (223)
T ss_dssp HHHHHHHH-HCSEEEEEECCCCCCCCSCTT---TSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCG
T ss_pred HHHHHHHH-hCCCCEEEECCCCCCCCCCcc---cCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecch
Confidence 55544332 378999999865331 1111 234454444443 334 456777776543 45555543
No 103
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=35.84 E-value=1.3e+02 Score=29.18 Aligned_cols=31 Identities=26% Similarity=0.246 Sum_probs=24.7
Q ss_pred cEEEEEecCcccHHHHHHHHHHcCcEEEEec
Q 007518 76 KQALISLSDKKDLASLGIGLQELGYTIVSTG 106 (600)
Q Consensus 76 ~rALISVsDK~glv~~Ak~L~~lGfeIiATg 106 (600)
|++||+....-==..+|+.|.+.|++++.+.
T Consensus 29 k~~lVTGas~GIG~aia~~la~~G~~V~~~~ 59 (299)
T 3t7c_A 29 KVAFITGAARGQGRSHAITLAREGADIIAID 59 (299)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEe
Confidence 5799988764333678999999999999864
No 104
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=35.74 E-value=66 Score=31.61 Aligned_cols=113 Identities=20% Similarity=0.137 Sum_probs=61.2
Q ss_pred cEEEEEecCcccHHHHHHHHHHcCcEEEEechhHHHHHHCCCeeEEecccCCCCCCCCCcccccccccccccccCCCCHH
Q 007518 76 KQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLENAGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKH 155 (600)
Q Consensus 76 ~rALISVsDK~glv~~Ak~L~~lGfeIiATgGTAk~L~e~GI~v~~VskiTGfPEildGRVKTLHPkIhGGILarr~~~~ 155 (600)
|.|||+-.-+-==..+|+.|.+.|+.++-+.-..+.|++. +.++.. .++++.++. ++=.+++
T Consensus 10 KvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~------~~~l~~----~g~~~~~~~--------~Dv~~~~ 71 (255)
T 4g81_D 10 KTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAES------VDTLTR----KGYDAHGVA--------FDVTDEL 71 (255)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHH------HHHHHH----TTCCEEECC--------CCTTCHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHH------HHHHHh----cCCcEEEEE--------eeCCCHH
Confidence 5688887765333678999999999999987665555441 111110 123332221 1222344
Q ss_pred hHHHHH---HcCCCceeEEEEec--cCcHHhhhcCCCCChhhhhhcccc---chHHHHHHHHH
Q 007518 156 HMDALS---EHGIGTFDLVVVNL--YPFYDKVTSAGGIDFEDGIENIDI---GGPAMIRAAAK 210 (600)
Q Consensus 156 h~~~l~---~~~I~~IDlVVVNL--YPFe~tv~~~~~~~~ee~IEnIDI---GGpsmiRAAAK 210 (600)
.++++- ....++||++|.|- .++. .+. +.+.|+.-+.+|+ |---|.|++++
T Consensus 72 ~v~~~~~~~~~~~G~iDiLVNNAG~~~~~-~~~---~~~~e~~~~~~~vNl~g~~~~~~~~~p 130 (255)
T 4g81_D 72 AIEAAFSKLDAEGIHVDILINNAGIQYRK-PMV---ELELENWQKVIDTNLTSAFLVSRSAAK 130 (255)
T ss_dssp HHHHHHHHHHHTTCCCCEEEECCCCCCCC-CGG---GCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCcEEEECCCCCCCC-Chh---hCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 444332 23356899999984 2221 111 2345554444443 33456677765
No 105
>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*
Probab=35.68 E-value=1.5e+02 Score=27.92 Aligned_cols=32 Identities=16% Similarity=0.155 Sum_probs=24.2
Q ss_pred CCcEEEEEecCcccHHHHHHHHHHcCcEEEEe
Q 007518 74 ANKQALISLSDKKDLASLGIGLQELGYTIVST 105 (600)
Q Consensus 74 ~i~rALISVsDK~glv~~Ak~L~~lGfeIiAT 105 (600)
+-+++||+....-==..+|+.|.+.|++++..
T Consensus 25 ~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~ 56 (267)
T 4iiu_A 25 MSRSVLVTGASKGIGRAIARQLAADGFNIGVH 56 (267)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEE
Confidence 34678998876433468999999999999553
No 106
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=35.62 E-value=89 Score=29.81 Aligned_cols=39 Identities=18% Similarity=0.225 Sum_probs=29.0
Q ss_pred CcEEEEEecCcccHHHHHHHHHHcCcEEEEechhHHHHH
Q 007518 75 NKQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLE 113 (600)
Q Consensus 75 i~rALISVsDK~glv~~Ak~L~~lGfeIiATgGTAk~L~ 113 (600)
-|++||+....-=-..+|+.|.+.|++++.+.-+...++
T Consensus 21 ~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~ 59 (267)
T 1vl8_A 21 GRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEAS 59 (267)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 367899887543336789999999999999876554443
No 107
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=35.55 E-value=50 Score=30.48 Aligned_cols=123 Identities=16% Similarity=0.093 Sum_probs=67.1
Q ss_pred cEEEEEecCcccHHHHHHHHHHcCcEEEEechhHHHHHHCCCeeEEecccCCCCCCCCCcccccccccccccccCCCCHH
Q 007518 76 KQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLENAGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKH 155 (600)
Q Consensus 76 ~rALISVsDK~glv~~Ak~L~~lGfeIiATgGTAk~L~e~GI~v~~VskiTGfPEildGRVKTLHPkIhGGILarr~~~~ 155 (600)
|++||+....-=-..+|+.|.+.|++++.++-....|++. ..+ +++++..+. .+-.+++
T Consensus 2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~------~~~-------~~~~~~~~~--------~D~~~~~ 60 (230)
T 3guy_A 2 SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTV------TNC-------LSNNVGYRA--------RDLASHQ 60 (230)
T ss_dssp -CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHH------HHT-------CSSCCCEEE--------CCTTCHH
T ss_pred CEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH------HHH-------HhhccCeEe--------ecCCCHH
Confidence 5688887754333678999999999999998777666551 011 134443221 2223456
Q ss_pred hHHHHHHcCCCceeEEEEeccCcH-HhhhcCCCCChhhhhhc--cccchH-HHHHHHHHCCC----CEEEEeCCC
Q 007518 156 HMDALSEHGIGTFDLVVVNLYPFY-DKVTSAGGIDFEDGIEN--IDIGGP-AMIRAAAKNHK----DVLVVVGSE 222 (600)
Q Consensus 156 h~~~l~~~~I~~IDlVVVNLYPFe-~tv~~~~~~~~ee~IEn--IDIGGp-smiRAAAKN~~----~V~Vv~dP~ 222 (600)
.++++-+.-...+|+||.|--... .... ..+.++.-+. +..-|+ -++|++.+... +++.+++..
T Consensus 61 ~v~~~~~~~~~~~d~lv~~Ag~~~~~~~~---~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~ 132 (230)
T 3guy_A 61 EVEQLFEQLDSIPSTVVHSAGSGYFGLLQ---EQDPEQIQTLIENNLSSAINVLRELVKRYKDQPVNVVMIMSTA 132 (230)
T ss_dssp HHHHHHHSCSSCCSEEEECCCCCCCSCGG---GSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCEEEEECCGG
T ss_pred HHHHHHHHHhhcCCEEEEeCCcCCCCccc---cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeecc
Confidence 666665554445599988754211 1111 2344444333 334444 45666655332 566665544
No 108
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structu initiative; 1.80A {Bacteroides fragilis}
Probab=35.53 E-value=1.8e+02 Score=23.56 Aligned_cols=97 Identities=12% Similarity=0.088 Sum_probs=55.3
Q ss_pred cEEEEEecCcccHHHHHHHHHHcCcEEEEechhHHHHHHCCCeeEEecccCCCCCCCCCcccccccccccccccCCCCHH
Q 007518 76 KQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLENAGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKH 155 (600)
Q Consensus 76 ~rALISVsDK~glv~~Ak~L~~lGfeIiATgGTAk~L~e~GI~v~~VskiTGfPEildGRVKTLHPkIhGGILarr~~~~ 155 (600)
.++||--.|..-...+.+.|.+.||++.........++
T Consensus 4 ~~ilivdd~~~~~~~l~~~L~~~g~~v~~~~~~~~a~~------------------------------------------ 41 (140)
T 2qr3_A 4 GTIIIVDDNKGVLTAVQLLLKNHFSKVITLSSPVSLST------------------------------------------ 41 (140)
T ss_dssp CEEEEECSCHHHHHHHHHHHTTTSSEEEEECCHHHHHH------------------------------------------
T ss_pred ceEEEEeCCHHHHHHHHHHHHhCCcEEEEeCCHHHHHH------------------------------------------
Confidence 35666555666666777777778888775544333322
Q ss_pred hHHHHHHcCCCceeEEEEeccCcHHhhhcCCCCChhhhhhccccchHHHHHHHHHCC--CCEEEEeCCCCHHHHHHHHhC
Q 007518 156 HMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGPAMIRAAAKNH--KDVLVVVGSEDYPALLEFLKG 233 (600)
Q Consensus 156 h~~~l~~~~I~~IDlVVVNLYPFe~tv~~~~~~~~ee~IEnIDIGGpsmiRAAAKN~--~~V~Vv~dP~DY~~vl~eL~~ 233 (600)
.+++ .++|+|++++---.. .+-|..|..++|.--+.+ -.|.++++..+.+.+.+.++.
T Consensus 42 ---~l~~---~~~dlvi~d~~~~~~--------------~~~~~~g~~~~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~ 101 (140)
T 2qr3_A 42 ---VLRE---ENPEVVLLDMNFTSG--------------INNGNEGLFWLHEIKRQYRDLPVVLFTAYADIDLAVRGIKE 101 (140)
T ss_dssp ---HHHH---SCEEEEEEETTTTC-------------------CCHHHHHHHHHHHCTTCCEEEEEEGGGHHHHHHHHHT
T ss_pred ---HHHc---CCCCEEEEeCCcCCC--------------CCCCccHHHHHHHHHhhCcCCCEEEEECCCCHHHHHHHHHc
Confidence 2333 247999998742100 011233555555554443 457778887777777776665
Q ss_pred C
Q 007518 234 N 234 (600)
Q Consensus 234 G 234 (600)
|
T Consensus 102 g 102 (140)
T 2qr3_A 102 G 102 (140)
T ss_dssp T
T ss_pred C
Confidence 4
No 109
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=34.47 E-value=1.1e+02 Score=28.83 Aligned_cols=38 Identities=13% Similarity=0.177 Sum_probs=26.9
Q ss_pred cEEEEEecCcccHHHHHHHHHHcCcEEEEechhHHHHH
Q 007518 76 KQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLE 113 (600)
Q Consensus 76 ~rALISVsDK~glv~~Ak~L~~lGfeIiATgGTAk~L~ 113 (600)
+++||+-...-==..+|+.|.+.|++++.+.-....++
T Consensus 3 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~ 40 (256)
T 1geg_A 3 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAK 40 (256)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 46788776433235789999999999998865544443
No 110
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=34.29 E-value=1.1e+02 Score=29.18 Aligned_cols=32 Identities=28% Similarity=0.213 Sum_probs=25.0
Q ss_pred cEEEEEecCcccHHHHHHHHHHcCcEEEEech
Q 007518 76 KQALISLSDKKDLASLGIGLQELGYTIVSTGG 107 (600)
Q Consensus 76 ~rALISVsDK~glv~~Ak~L~~lGfeIiATgG 107 (600)
|++||+-...-==..+|+.|.+.|++++.+.-
T Consensus 11 k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r 42 (281)
T 3s55_A 11 KTALITGGARGMGRSHAVALAEAGADIAICDR 42 (281)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCeEEEEeC
Confidence 57999887543236789999999999998754
No 111
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=34.20 E-value=1.9e+02 Score=23.57 Aligned_cols=37 Identities=5% Similarity=0.205 Sum_probs=23.6
Q ss_pred cEEEEEecCcccHHHHHHHHHHcCcEEEEechhHHHH
Q 007518 76 KQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSL 112 (600)
Q Consensus 76 ~rALISVsDK~glv~~Ak~L~~lGfeIiATgGTAk~L 112 (600)
.++||--.|..-...+.+.|.+.||++.........|
T Consensus 5 ~~iLivdd~~~~~~~l~~~L~~~g~~v~~~~~~~~a~ 41 (142)
T 2qxy_A 5 PTVMVVDESRITFLAVKNALEKDGFNVIWAKNEQEAF 41 (142)
T ss_dssp CEEEEECSCHHHHHHHHHHHGGGTCEEEEESSHHHHH
T ss_pred CeEEEEeCCHHHHHHHHHHHHhCCCEEEEECCHHHHH
Confidence 4666655566666677777777888887554433333
No 112
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=34.15 E-value=97 Score=29.14 Aligned_cols=37 Identities=16% Similarity=0.211 Sum_probs=26.9
Q ss_pred cEEEEEecCcccHHHHHHHHHHcCcEEEEechhHHHH
Q 007518 76 KQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSL 112 (600)
Q Consensus 76 ~rALISVsDK~glv~~Ak~L~~lGfeIiATgGTAk~L 112 (600)
+++||+....-==..+|+.|.+.|++++.+.-....+
T Consensus 6 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~ 42 (260)
T 2qq5_A 6 QVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTL 42 (260)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHH
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence 5688887654333688999999999999886554443
No 113
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Probab=34.02 E-value=1.1e+02 Score=28.62 Aligned_cols=34 Identities=15% Similarity=-0.007 Sum_probs=26.0
Q ss_pred cEEEEEecCcccHHHHHHHHHHcCcEEEEechhH
Q 007518 76 KQALISLSDKKDLASLGIGLQELGYTIVSTGGTA 109 (600)
Q Consensus 76 ~rALISVsDK~glv~~Ak~L~~lGfeIiATgGTA 109 (600)
+++||+-...-==..+|+.|.+.|++++.+.-..
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~ 41 (249)
T 2ew8_A 8 KLAVITGGANGIGRAIAERFAVEGADIAIADLVP 41 (249)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCc
Confidence 5788888754333678999999999999886543
No 114
>3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica}
Probab=33.79 E-value=1.8e+02 Score=25.10 Aligned_cols=23 Identities=13% Similarity=0.140 Sum_probs=19.2
Q ss_pred ccHHHHHHHHHHcCcEE-EEechh
Q 007518 86 KDLASLGIGLQELGYTI-VSTGGT 108 (600)
Q Consensus 86 ~glv~~Ak~L~~lGfeI-iATgGT 108 (600)
.++.++.+.|++.|+.+ +.|+++
T Consensus 30 ~g~~~~l~~L~~~g~~~~i~Tn~~ 53 (179)
T 3l8h_A 30 PGSLQAIARLTQADWTVVLATNQS 53 (179)
T ss_dssp TTHHHHHHHHHHTTCEEEEEEECT
T ss_pred cCHHHHHHHHHHCCCEEEEEECCC
Confidence 68899999999999986 566665
No 115
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=33.76 E-value=79 Score=30.48 Aligned_cols=32 Identities=13% Similarity=0.041 Sum_probs=25.2
Q ss_pred cEEEEEecCcccHHHHHHHHHHcCcEEEEech
Q 007518 76 KQALISLSDKKDLASLGIGLQELGYTIVSTGG 107 (600)
Q Consensus 76 ~rALISVsDK~glv~~Ak~L~~lGfeIiATgG 107 (600)
+++||+-...-==..+|+.|.+.|++++.+.-
T Consensus 10 k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r 41 (285)
T 3sc4_A 10 KTMFISGGSRGIGLAIAKRVAADGANVALVAK 41 (285)
T ss_dssp CEEEEESCSSHHHHHHHHHHHTTTCEEEEEES
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEEC
Confidence 57899887643336789999999999998754
No 116
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=33.60 E-value=65 Score=31.65 Aligned_cols=39 Identities=8% Similarity=-0.019 Sum_probs=29.0
Q ss_pred cEEEEEecCcccHHHHHHHHHHcCcEEEEechhHHHHHH
Q 007518 76 KQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLEN 114 (600)
Q Consensus 76 ~rALISVsDK~glv~~Ak~L~~lGfeIiATgGTAk~L~e 114 (600)
|.|||+-.-+-==..+|+.|.+.|..++.+.-..+.|++
T Consensus 8 KvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~ 46 (254)
T 4fn4_A 8 KVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQ 46 (254)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHH
Confidence 568888875533367899999999999998765554443
No 117
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=33.59 E-value=97 Score=30.37 Aligned_cols=121 Identities=16% Similarity=0.132 Sum_probs=61.5
Q ss_pred CCcEEEEEecCcccHHHHHHHHHHc-CcEEEEechhHHHHHHCCCeeEEecccCCCCCCCC-CcccccccccccccccCC
Q 007518 74 ANKQALISLSDKKDLASLGIGLQEL-GYTIVSTGGTATSLENAGVSVTKVEQLTCFPEMLD-GRVKTLHPNIHGGILARR 151 (600)
Q Consensus 74 ~i~rALISVsDK~glv~~Ak~L~~l-GfeIiATgGTAk~L~e~GI~v~~VskiTGfPEild-GRVKTLHPkIhGGILarr 151 (600)
+.+++||+...--=--.+++.|.+. |++++++.-....+ ++... .+|..+. |=|.
T Consensus 23 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~----------------~~~~~~~~v~~~~-----~Dl~-- 79 (372)
T 3slg_A 23 KAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRL----------------GDLVKHERMHFFE-----GDIT-- 79 (372)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTT----------------GGGGGSTTEEEEE-----CCTT--
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhh----------------hhhccCCCeEEEe-----CccC--
Confidence 3468999886321124677888888 89998875321110 11111 2222211 1111
Q ss_pred CCHHhHHHHHHcCCCceeEEEEeccCcHHhhhcCCCCChhhhhhcccc-chHHHHHHHHHCCCCEEEEeCCCCHH
Q 007518 152 DQKHHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDI-GGPAMIRAAAKNHKDVLVVVGSEDYP 225 (600)
Q Consensus 152 ~~~~h~~~l~~~~I~~IDlVVVNLYPFe~tv~~~~~~~~ee~IEnIDI-GGpsmiRAAAKN~~~V~Vv~dP~DY~ 225 (600)
++++.++++-+ .+|.||.+--........ .+.++.++ +.+ |--.++++|.++-++++.++...-|.
T Consensus 80 ~d~~~~~~~~~----~~d~Vih~A~~~~~~~~~---~~~~~~~~-~nv~~~~~ll~a~~~~~~~~v~~SS~~vyg 146 (372)
T 3slg_A 80 INKEWVEYHVK----KCDVILPLVAIATPATYV---KQPLRVFE-LDFEANLPIVRSAVKYGKHLVFPSTSEVYG 146 (372)
T ss_dssp TCHHHHHHHHH----HCSEEEECBCCCCHHHHH---HCHHHHHH-HHTTTTHHHHHHHHHHTCEEEEECCGGGGB
T ss_pred CCHHHHHHHhc----cCCEEEEcCccccHHHHh---hCHHHHHH-HHHHHHHHHHHHHHHhCCcEEEeCcHHHhC
Confidence 14455544333 689888654322111110 02233332 333 44578888887667777777765553
No 118
>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}
Probab=33.58 E-value=34 Score=32.69 Aligned_cols=33 Identities=9% Similarity=0.118 Sum_probs=24.4
Q ss_pred CcEEEEEecCcccHHHHHHHHHHcCcEEEEech
Q 007518 75 NKQALISLSDKKDLASLGIGLQELGYTIVSTGG 107 (600)
Q Consensus 75 i~rALISVsDK~glv~~Ak~L~~lGfeIiATgG 107 (600)
-+++||+-...-==..+|+.|.+.|++++.+.-
T Consensus 21 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r 53 (253)
T 2nm0_A 21 SRSVLVTGGNRGIGLAIARAFADAGDKVAITYR 53 (253)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeC
Confidence 357888887543235788999999999988753
No 119
>2b3j_A TRNA adenosine deaminase; mixed alpha-beta, protein-RNA complex, RNA stem-loop, hydrol complex; HET: P5P; 2.00A {Staphylococcus aureus subsp} SCOP: c.97.1.2
Probab=33.42 E-value=89 Score=28.64 Aligned_cols=62 Identities=16% Similarity=0.249 Sum_probs=46.8
Q ss_pred EEEEEeCCeEEEecCCCCc-----HHHHHHHHHHHcCC-----ccCceEEeecccccCCccchHHHHHHCCCeEEe
Q 007518 503 AIVIAKNNCMLGMGSGQPN-----RRESLRIAMKKAGD-----EVKGAALASDAFFPFAWKDAVEEACENGIGVIA 568 (600)
Q Consensus 503 AIV~ak~~~tvGiGaGQ~s-----RVds~~iA~~kA~~-----~~~GavlASDAFFPF~~~D~ve~Aa~aGi~aII 568 (600)
|++ ++||++||.|.-+.+ ...|-..|+.+|.. ++.|+.|-.- ..|=+ =+......+||+.|+
T Consensus 31 Avi-v~~g~Ii~~G~N~~~~~~~~~~HAE~~Ai~~a~~~~~~~~l~~~tlyvT-~EPC~--mC~~ai~~agi~rVv 102 (159)
T 2b3j_A 31 AII-TKDDEVIARAHNLRETLQQPTAHAEHIAIERAAKVLGSWRLEGCTLYVT-LEPCV--MCAGTIVMSRIPRVV 102 (159)
T ss_dssp EEE-EETTEEEEEEECCHHHHTCTTCCHHHHHHHHHHHHHTSSCCTTEEEEEE-ECCCH--HHHHHHHHTTCSEEE
T ss_pred EEE-EECCEEEEEEECCCCCCCCCccCHHHHHHHHHHHHcCCCCcceeEEEEC-CCCcH--HHHHHHHHhCCCeEE
Confidence 544 469999999987653 34666677777743 5788888764 45888 999999999999987
No 120
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=33.37 E-value=88 Score=29.62 Aligned_cols=30 Identities=13% Similarity=0.165 Sum_probs=24.1
Q ss_pred cEEEEEecCcccHHHHHHHHHHcCcEEEEe
Q 007518 76 KQALISLSDKKDLASLGIGLQELGYTIVST 105 (600)
Q Consensus 76 ~rALISVsDK~glv~~Ak~L~~lGfeIiAT 105 (600)
+++||+....-==..+|+.|.+.|++++.+
T Consensus 9 k~vlVTGas~GIG~aia~~la~~G~~V~~~ 38 (259)
T 3edm_A 9 RTIVVAGAGRDIGRACAIRFAQEGANVVLT 38 (259)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEE
Confidence 578998875432367899999999999988
No 121
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=33.34 E-value=73 Score=29.73 Aligned_cols=33 Identities=24% Similarity=0.220 Sum_probs=25.2
Q ss_pred CcEEEEEecCcccHHHHHHHHHHcCcEEEEech
Q 007518 75 NKQALISLSDKKDLASLGIGLQELGYTIVSTGG 107 (600)
Q Consensus 75 i~rALISVsDK~glv~~Ak~L~~lGfeIiATgG 107 (600)
-+++||+....-=-..+++.|.+.|++++.+..
T Consensus 21 ~k~vlItGasggiG~~la~~l~~~G~~v~~~~r 53 (274)
T 1ja9_A 21 GKVALTTGAGRGIGRGIAIELGRRGASVVVNYG 53 (274)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcC
Confidence 357888877433236789999999999998765
No 122
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=33.31 E-value=1.3e+02 Score=28.44 Aligned_cols=31 Identities=23% Similarity=0.199 Sum_probs=24.8
Q ss_pred cEEEEEecCcccHHHHHHHHHHcCcEEEEec
Q 007518 76 KQALISLSDKKDLASLGIGLQELGYTIVSTG 106 (600)
Q Consensus 76 ~rALISVsDK~glv~~Ak~L~~lGfeIiATg 106 (600)
|++||+....-==..+|+.|.+.|++++.++
T Consensus 11 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~ 41 (287)
T 3pxx_A 11 KVVLVTGGARGQGRSHAVKLAEEGADIILFD 41 (287)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCeEEEEc
Confidence 5799988764333678999999999999875
No 123
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=33.26 E-value=94 Score=30.58 Aligned_cols=31 Identities=23% Similarity=0.234 Sum_probs=24.6
Q ss_pred cEEEEEecCcccHHHHHHHHHHcCcEEEEec
Q 007518 76 KQALISLSDKKDLASLGIGLQELGYTIVSTG 106 (600)
Q Consensus 76 ~rALISVsDK~glv~~Ak~L~~lGfeIiATg 106 (600)
|++||+....-=-..+|+.|.+.|++++.+.
T Consensus 47 k~~lVTGas~GIG~aia~~la~~G~~Vv~~~ 77 (317)
T 3oec_A 47 KVAFITGAARGQGRTHAVRLAQDGADIVAID 77 (317)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCeEEEEe
Confidence 5789988754333688999999999999864
No 124
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=33.26 E-value=1.8e+02 Score=27.77 Aligned_cols=38 Identities=18% Similarity=0.154 Sum_probs=27.8
Q ss_pred cEEEEEecCcccHHHHHHHHHHcCcEEEEechhHHHHH
Q 007518 76 KQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLE 113 (600)
Q Consensus 76 ~rALISVsDK~glv~~Ak~L~~lGfeIiATgGTAk~L~ 113 (600)
+++||+....-=-..+|+.|.+.|++++.+.-....++
T Consensus 19 k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~ 56 (303)
T 1yxm_A 19 QVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLK 56 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 57899887532235789999999999999865544443
No 125
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=33.15 E-value=1.3e+02 Score=28.60 Aligned_cols=31 Identities=19% Similarity=0.248 Sum_probs=24.9
Q ss_pred cEEEEEecCcccHHHHHHHHHHcCcEEEEec
Q 007518 76 KQALISLSDKKDLASLGIGLQELGYTIVSTG 106 (600)
Q Consensus 76 ~rALISVsDK~glv~~Ak~L~~lGfeIiATg 106 (600)
|++||+-...-==..+|+.|.+.|++++.++
T Consensus 12 k~~lVTGas~gIG~aia~~la~~G~~V~~~~ 42 (286)
T 3uve_A 12 KVAFVTGAARGQGRSHAVRLAQEGADIIAVD 42 (286)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCeEEEEe
Confidence 5799998864333688999999999999874
No 126
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=32.92 E-value=96 Score=29.09 Aligned_cols=31 Identities=29% Similarity=0.221 Sum_probs=23.3
Q ss_pred cEEEEEecCcccHHHHHHHHHHcCcEEEEec
Q 007518 76 KQALISLSDKKDLASLGIGLQELGYTIVSTG 106 (600)
Q Consensus 76 ~rALISVsDK~glv~~Ak~L~~lGfeIiATg 106 (600)
+++||+-...-==..+|+.|.+.|++++.+.
T Consensus 5 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~ 35 (255)
T 2q2v_A 5 KTALVTGSTSGIGLGIAQVLARAGANIVLNG 35 (255)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEe
Confidence 4688877653323678899999999999874
No 127
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=32.88 E-value=2.2e+02 Score=26.11 Aligned_cols=108 Identities=15% Similarity=0.077 Sum_probs=59.9
Q ss_pred CCcEEEEEecCcccHHHHHHHHHHcC-cEEEEechhHHHHHHCCCeeEEecccCCCCCCCCCcccccccccccccccCCC
Q 007518 74 ANKQALISLSDKKDLASLGIGLQELG-YTIVSTGGTATSLENAGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRD 152 (600)
Q Consensus 74 ~i~rALISVsDK~glv~~Ak~L~~lG-feIiATgGTAk~L~e~GI~v~~VskiTGfPEildGRVKTLHPkIhGGILarr~ 152 (600)
+++++||+...--==..+++.|.+.| ++++.+.-....+ ++....++..+ .++-.
T Consensus 22 ~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~----------------~~~~~~~~~~~--------~~Dl~ 77 (236)
T 3qvo_A 22 HMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKI----------------HKPYPTNSQII--------MGDVL 77 (236)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGS----------------CSSCCTTEEEE--------ECCTT
T ss_pred cccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhh----------------cccccCCcEEE--------EecCC
Confidence 45789998864322257889999999 8988875432111 11222223221 12223
Q ss_pred CHHhHHHHHHcCCCceeEEEEeccCcHHhhhcCCCCChhhhhhccccchHHHHHHHHHC-CCCEEEEeCCCCHHH
Q 007518 153 QKHHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGPAMIRAAAKN-HKDVLVVVGSEDYPA 226 (600)
Q Consensus 153 ~~~h~~~l~~~~I~~IDlVVVNLYPFe~tv~~~~~~~~ee~IEnIDIGGpsmiRAAAKN-~~~V~Vv~dP~DY~~ 226 (600)
+++.++++- ..+|.||.|.-+. ++ +.+--.+++++.++ .++++.+++-.-|..
T Consensus 78 d~~~~~~~~----~~~D~vv~~a~~~----------~~-------~~~~~~~~~~~~~~~~~~iV~iSS~~~~~~ 131 (236)
T 3qvo_A 78 NHAALKQAM----QGQDIVYANLTGE----------DL-------DIQANSVIAAMKACDVKRLIFVLSLGIYDE 131 (236)
T ss_dssp CHHHHHHHH----TTCSEEEEECCST----------TH-------HHHHHHHHHHHHHTTCCEEEEECCCCC---
T ss_pred CHHHHHHHh----cCCCEEEEcCCCC----------ch-------hHHHHHHHHHHHHcCCCEEEEEecceecCC
Confidence 455555543 3579999887431 11 22333678877665 467777777776654
No 128
>2csu_A 457AA long hypothetical protein; structural genomics, PH0766, riken ST genomics/proteomics initiative, RSGI, NPPSFA; 2.20A {Pyrococcus horikoshii} SCOP: c.2.1.8 c.23.4.1 c.23.4.1
Probab=32.85 E-value=31 Score=36.69 Aligned_cols=39 Identities=21% Similarity=0.459 Sum_probs=31.7
Q ss_pred cchHHHHHHCCCeE-EecCCCC--CC------chHHHHHHHhcCcEEE
Q 007518 553 KDAVEEACENGIGV-IAEPGGS--IR------DGDAIDCCNKYGVALL 591 (600)
Q Consensus 553 ~D~ve~Aa~aGi~a-IIQPGGS--iR------D~evI~aa~e~giaMv 591 (600)
-|.+++|.+.||++ |+++.|= .- .+|+.++|.++||.++
T Consensus 78 ~~~v~e~~~~Gi~~vv~~s~G~~e~g~~g~~~~~~l~~~a~~~g~~vi 125 (457)
T 2csu_A 78 KDTLIQCGEKGVKGVVIITAGFGETGEEGKREEKELVEIAHKYGMRII 125 (457)
T ss_dssp HHHHHHHHHHTCCEEEECCCSSTTSCHHHHHHHHHHHHHHHHHTCEEE
T ss_pred HHHHHHHHHcCCCEEEEecCCCCccccccHHHHHHHHHHHHHcCCEEE
Confidence 38899999999997 5577663 22 5789999999999887
No 129
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=32.62 E-value=1.9e+02 Score=23.14 Aligned_cols=93 Identities=23% Similarity=0.214 Sum_probs=56.5
Q ss_pred CcEEEEEecCcccHHHHHHHHHHcCcEEEEechhHHHHHHCCCeeEEecccCCCCCCCCCcccccccccccccccCCCCH
Q 007518 75 NKQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLENAGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQK 154 (600)
Q Consensus 75 i~rALISVsDK~glv~~Ak~L~~lGfeIiATgGTAk~L~e~GI~v~~VskiTGfPEildGRVKTLHPkIhGGILarr~~~ 154 (600)
.+++||--.|..-...+.+.|.+.||++.........++.
T Consensus 7 ~~~ilivdd~~~~~~~l~~~L~~~g~~v~~~~~~~~a~~~---------------------------------------- 46 (130)
T 3eod_A 7 GKQILIVEDEQVFRSLLDSWFSSLGATTVLAADGVDALEL---------------------------------------- 46 (130)
T ss_dssp TCEEEEECSCHHHHHHHHHHHHHTTCEEEEESCHHHHHHH----------------------------------------
T ss_pred CCeEEEEeCCHHHHHHHHHHHHhCCceEEEeCCHHHHHHH----------------------------------------
Confidence 3467766566666677777888888887765443333332
Q ss_pred HhHHHHHHcCCCceeEEEEeccCcHHhhhcCCCCChhhhhhccccchHHHHHHHHHCC--CCEEEEeCCCCHHHHHHHHh
Q 007518 155 HHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGPAMIRAAAKNH--KDVLVVVGSEDYPALLEFLK 232 (600)
Q Consensus 155 ~h~~~l~~~~I~~IDlVVVNLYPFe~tv~~~~~~~~ee~IEnIDIGGpsmiRAAAKN~--~~V~Vv~dP~DY~~vl~eL~ 232 (600)
..-.++|+|++++.-- + ..|..++|.--+++ -.|.++++..+.+.+.+.++
T Consensus 47 --------l~~~~~dlvi~d~~l~--------~-----------~~g~~~~~~l~~~~~~~~ii~~t~~~~~~~~~~~~~ 99 (130)
T 3eod_A 47 --------LGGFTPDLMICDIAMP--------R-----------MNGLKLLEHIRNRGDQTPVLVISATENMADIAKALR 99 (130)
T ss_dssp --------HTTCCCSEEEECCC------------------------CHHHHHHHHHTTCCCCEEEEECCCCHHHHHHHHH
T ss_pred --------HhcCCCCEEEEecCCC--------C-----------CCHHHHHHHHHhcCCCCCEEEEEcCCCHHHHHHHHH
Confidence 1124579999987521 1 12444454444443 46888889888887777776
Q ss_pred CC
Q 007518 233 GN 234 (600)
Q Consensus 233 ~G 234 (600)
.|
T Consensus 100 ~g 101 (130)
T 3eod_A 100 LG 101 (130)
T ss_dssp HC
T ss_pred cC
Confidence 43
No 130
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=32.52 E-value=1e+02 Score=28.71 Aligned_cols=37 Identities=19% Similarity=0.195 Sum_probs=26.0
Q ss_pred cEEEEEecCcccHHHHHHHHHHcCcEEEEech-hHHHH
Q 007518 76 KQALISLSDKKDLASLGIGLQELGYTIVSTGG-TATSL 112 (600)
Q Consensus 76 ~rALISVsDK~glv~~Ak~L~~lGfeIiATgG-TAk~L 112 (600)
+++||+-...-==..+|+.|.+.|++++.+.. ....+
T Consensus 5 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~ 42 (246)
T 2uvd_A 5 KVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKA 42 (246)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHH
Confidence 46787776433236789999999999998765 44433
No 131
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=32.29 E-value=27 Score=30.61 Aligned_cols=51 Identities=14% Similarity=0.298 Sum_probs=39.1
Q ss_pred hcHHHHHHHHHhcCCCeEEEEccCCcccccccCCHHHHHHHHHhcCCCCcC
Q 007518 330 LDADAAWNCVSEFKNPTCVIVKHTNPCGVASRDDILEAYKLAVKADPVSAF 380 (600)
Q Consensus 330 lD~daA~~lv~ef~~pa~vivKH~nPCGvA~~~~l~eAy~~A~~~DpvSaF 380 (600)
.++..|++++.+...+..+|+.++.+.|+-+..++.+++.+....||.+..
T Consensus 125 ~~l~~a~~~m~~~~~~~l~Vvd~g~~vGiit~~dll~~l~~~~~~~~~~~~ 175 (185)
T 2j9l_A 125 TPMEIVVDIFRKLGLRQCLVTHNGRLLGIITKKDVLKHIAQMANQDPDSIL 175 (185)
T ss_dssp SBHHHHHHHHHHHTCSEEEEEETTEEEEEEEHHHHHHHHHHHCC-------
T ss_pred CCHHHHHHHHHhCCCcEEEEEECCEEEEEEEHHHHHHHHHHhhccchhhhh
Confidence 356778888888888888889999999999999999999999888876643
No 132
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=32.15 E-value=1.1e+02 Score=29.52 Aligned_cols=32 Identities=25% Similarity=0.305 Sum_probs=24.8
Q ss_pred cEEEEEecCcccHHHHHHHHHHcCcEEEEech
Q 007518 76 KQALISLSDKKDLASLGIGLQELGYTIVSTGG 107 (600)
Q Consensus 76 ~rALISVsDK~glv~~Ak~L~~lGfeIiATgG 107 (600)
|++||+-...-==..+|+.|.+.|++++.++-
T Consensus 34 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r 65 (275)
T 4imr_A 34 RTALVTGSSRGIGAAIAEGLAGAGAHVILHGV 65 (275)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEcC
Confidence 57888887543336889999999999998754
No 133
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=32.02 E-value=1.3e+02 Score=28.89 Aligned_cols=30 Identities=23% Similarity=0.296 Sum_probs=23.8
Q ss_pred cEEEEEecCcccHHHHHHHHHHcCcEEEEe
Q 007518 76 KQALISLSDKKDLASLGIGLQELGYTIVST 105 (600)
Q Consensus 76 ~rALISVsDK~glv~~Ak~L~~lGfeIiAT 105 (600)
|++||+....-==..+|+.|.+.|+.++.+
T Consensus 28 k~~lVTGas~GIG~aia~~la~~G~~Vv~~ 57 (267)
T 3u5t_A 28 KVAIVTGASRGIGAAIAARLASDGFTVVIN 57 (267)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHHTCEEEEE
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEE
Confidence 578998875433367899999999999876
No 134
>3e2v_A 3'-5'-exonuclease; structural genomics, hydrolase, PSI-2, protein initiative, NEW YORK SGX research center for structural GEN nysgxrc; 1.50A {Saccharomyces cerevisiae}
Probab=31.89 E-value=18 Score=38.48 Aligned_cols=34 Identities=21% Similarity=0.268 Sum_probs=31.3
Q ss_pred chHHHHHHCCCeEEecCCCCCCch-HHHHHHHhcC
Q 007518 554 DAVEEACENGIGVIAEPGGSIRDG-DAIDCCNKYG 587 (600)
Q Consensus 554 D~ve~Aa~aGi~aIIQPGGSiRD~-evI~aa~e~g 587 (600)
+.|++|.++||+.||.||.|+.|- ++++.|++|.
T Consensus 42 ~vl~rA~~~GV~~ii~~g~~l~~s~~~~~La~~~~ 76 (401)
T 3e2v_A 42 KLLERAAQRHVKNALVTGSSIAESQSAIELVSSVK 76 (401)
T ss_dssp HHHHHHHHTTEEEEEECCCSHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHCCCCEEEEecCCHHHHHHHHHHHHHCC
Confidence 579999999999999999999887 7999999984
No 135
>1usg_A Leucine-specific binding protein; leucine-binding protein, X-RAY crystallography, protein structure, ABC transport systems, transport protein; 1.53A {Escherichia coli} SCOP: c.93.1.1 PDB: 1usi_A* 1usk_A 2lbp_A 1z15_A 1z16_A 1z17_A 1z18_A 2liv_A
Probab=31.85 E-value=46 Score=31.75 Aligned_cols=72 Identities=19% Similarity=0.171 Sum_probs=46.2
Q ss_pred HHHHHHHHHHcCC--ccCc----eEEeecccccCCccchHHHHHHCCCeEEecCCCCCCchHHHHHHHhcCcEEEecC
Q 007518 523 RESLRIAMKKAGD--EVKG----AALASDAFFPFAWKDAVEEACENGIGVIAEPGGSIRDGDAIDCCNKYGVALLLTS 594 (600)
Q Consensus 523 Vds~~iA~~kA~~--~~~G----avlASDAFFPF~~~D~ve~Aa~aGi~aIIQPGGSiRD~evI~aa~e~giaMvfTg 594 (600)
+.+++.|+++.++ .+.| .++..|..=|-.....++...+.||.+||-|.+|--...+.+.+++++|+||..+
T Consensus 23 ~~g~~~a~~~iN~~ggi~G~~l~l~~~d~~~~~~~~~~~~~~l~~~~v~~iig~~~s~~~~~~~~~~~~~~ip~v~~~ 100 (346)
T 1usg_A 23 FNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPG 100 (346)
T ss_dssp HHHHHHHHHHHHHTTTBTTBCEEEEEEECTTCHHHHHHHHHHHHHTTCCEEECCSSHHHHHHHHHHHHHHTCEEEECC
T ss_pred HHHHHHHHHHHHHhCCCCCeEEEEEEeCCCCCHHHHHHHHHHHHhCCCCEEEcCCCcHHHHHHHHHHHHCCCeEEeeC
Confidence 4566777766321 1234 2333334333322235566677899999988887555578889999999999865
No 136
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=31.72 E-value=22 Score=34.98 Aligned_cols=49 Identities=27% Similarity=0.373 Sum_probs=36.8
Q ss_pred cEEEEEec----CcccHHHHHHHHHHcCcEE-EEechhHHHHHHCCCeeEEecc
Q 007518 76 KQALISLS----DKKDLASLGIGLQELGYTI-VSTGGTATSLENAGVSVTKVEQ 124 (600)
Q Consensus 76 ~rALISVs----DK~glv~~Ak~L~~lGfeI-iATgGTAk~L~e~GI~v~~Vsk 124 (600)
+|+|+-.. +-.-++.||+.|.+.|+++ +.|..-.+.+.+.|++...+..
T Consensus 23 MRIL~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~t~~~~~~~~~~g~~~~~~~~ 76 (400)
T 4amg_A 23 MRALFITSPGLSHILPTVPLAQALRALGHEVRYATGGDIRAVAEAGLCAVDVSP 76 (400)
T ss_dssp CEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECSSTHHHHTTTCEEEESST
T ss_pred CeEEEECCCchhHHHHHHHHHHHHHHCCCEEEEEeCcchhhHHhcCCeeEecCC
Confidence 57776544 5677899999999999986 4555556667788998877654
No 137
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=31.65 E-value=1e+02 Score=29.52 Aligned_cols=32 Identities=13% Similarity=0.153 Sum_probs=24.4
Q ss_pred cEEEEEecCcccHHHHHHHHHHcCcEEEEech
Q 007518 76 KQALISLSDKKDLASLGIGLQELGYTIVSTGG 107 (600)
Q Consensus 76 ~rALISVsDK~glv~~Ak~L~~lGfeIiATgG 107 (600)
|++||+....-==..+|+.|.+.|++++.+..
T Consensus 29 k~vlVTGas~gIG~aia~~la~~G~~V~~~~~ 60 (269)
T 4dmm_A 29 RIALVTGASRGIGRAIALELAAAGAKVAVNYA 60 (269)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC
Confidence 57888877543335789999999999988654
No 138
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=31.41 E-value=62 Score=31.61 Aligned_cols=49 Identities=22% Similarity=0.151 Sum_probs=36.7
Q ss_pred cEEEEEec----CcccHHHHHHHHHHcCcEE--EEechhHHHHHHCCCeeEEecc
Q 007518 76 KQALISLS----DKKDLASLGIGLQELGYTI--VSTGGTATSLENAGVSVTKVEQ 124 (600)
Q Consensus 76 ~rALISVs----DK~glv~~Ak~L~~lGfeI--iATgGTAk~L~e~GI~v~~Vsk 124 (600)
+++|+... +-.-++.+|+.|.+.|+++ ++++.-...+++.|+++..+..
T Consensus 5 ~~il~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~~~~~~~~~~~G~~~~~~~~ 59 (402)
T 3ia7_A 5 RHILFANVQGHGHVYPSLGLVSELARRGHRITYVTTPLFADEVKAAGAEVVLYKS 59 (402)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECHHHHHHHHHTTCEEEECCC
T ss_pred CEEEEEeCCCCcccccHHHHHHHHHhCCCEEEEEcCHHHHHHHHHcCCEEEeccc
Confidence 36666544 4566889999999999876 4455566788999999988764
No 139
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=31.35 E-value=79 Score=30.38 Aligned_cols=116 Identities=7% Similarity=0.035 Sum_probs=55.9
Q ss_pred CcEEEEEecCcccHHHHHHHHHHcCcEEEEechhHHHHHHCCCeeEEecccCCCCCCCCCcccccccccccccccCCCCH
Q 007518 75 NKQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLENAGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQK 154 (600)
Q Consensus 75 i~rALISVsDK~glv~~Ak~L~~lGfeIiATgGTAk~L~e~GI~v~~VskiTGfPEildGRVKTLHPkIhGGILarr~~~ 154 (600)
.+++||+...--=--.+++.|.+.|+++++..-....++ ++-+.+|. +.-| +-.++
T Consensus 13 ~M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~----------------~l~~~~~~-----~~~~---Dl~d~ 68 (342)
T 2x4g_A 13 HVKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQ----------------RLAYLEPE-----CRVA---EMLDH 68 (342)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGG----------------GGGGGCCE-----EEEC---CTTCH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhh----------------hhccCCeE-----EEEe---cCCCH
Confidence 347998876322224677889999999988743211000 00000111 1111 11234
Q ss_pred HhHHHHHHcCCCceeEEEEeccCcHHhhhcCCCCChhhhhhccccch-HHHHHHHHHCC-CCEEEEeCCCCH
Q 007518 155 HHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGG-PAMIRAAAKNH-KDVLVVVGSEDY 224 (600)
Q Consensus 155 ~h~~~l~~~~I~~IDlVVVNLYPFe~tv~~~~~~~~ee~IEnIDIGG-psmiRAAAKN~-~~V~Vv~dP~DY 224 (600)
+.++++ +..+|.||.+--+.... ..+.++.+ ++.+-| -.++++|.++- ++++.++...-|
T Consensus 69 ~~~~~~----~~~~d~vih~a~~~~~~-----~~~~~~~~-~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~ 130 (342)
T 2x4g_A 69 AGLERA----LRGLDGVIFSAGYYPSR-----PRRWQEEV-ASALGQTNPFYAACLQARVPRILYVGSAYAM 130 (342)
T ss_dssp HHHHHH----TTTCSEEEEC-----------------CHH-HHHHHHHHHHHHHHHHHTCSCEEEECCGGGS
T ss_pred HHHHHH----HcCCCEEEECCccCcCC-----CCCHHHHH-HHHHHHHHHHHHHHHHcCCCeEEEECCHHhh
Confidence 444433 23689998877654311 11223333 344444 46888887753 677777776555
No 140
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=31.33 E-value=1e+02 Score=28.92 Aligned_cols=38 Identities=18% Similarity=0.106 Sum_probs=28.4
Q ss_pred cEEEEEecCcccHHHHHHHHHHcCcEEEEechhHHHHH
Q 007518 76 KQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLE 113 (600)
Q Consensus 76 ~rALISVsDK~glv~~Ak~L~~lGfeIiATgGTAk~L~ 113 (600)
+++||+....-==..+|+.|.+.|++++.+.-....++
T Consensus 8 k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~ 45 (247)
T 2jah_A 8 KVALITGASSGIGEATARALAAEGAAVAIAARRVEKLR 45 (247)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH
Confidence 57899887543336789999999999999876554444
No 141
>3cqj_A L-ribulose-5-phosphate 3-epimerase ULAE; TIM-barrel, isomerase, phosphate-binding motif; 2.04A {Escherichia coli} PDB: 3cqi_A 3cqh_A 3cqk_A
Probab=31.13 E-value=83 Score=30.00 Aligned_cols=40 Identities=23% Similarity=0.341 Sum_probs=28.4
Q ss_pred chHHHHHHCCCeEEecCCCCCC---c------------hHHHHHHHhcCcEEEec
Q 007518 554 DAVEEACENGIGVIAEPGGSIR---D------------GDAIDCCNKYGVALLLT 593 (600)
Q Consensus 554 D~ve~Aa~aGi~aIIQPGGSiR---D------------~evI~aa~e~giaMvfT 593 (600)
..++.|++.|++.|+-+||... + .++.+.|.++||.+.+=
T Consensus 112 ~~i~~A~~lG~~~v~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE 166 (295)
T 3cqj_A 112 KAIQFAQDVGIRVIQLAGYDVYYQEANNETRRRFRDGLKESVEMASRAQVTLAME 166 (295)
T ss_dssp HHHHHHHHHTCCEEEECCCSCSSSCCCHHHHHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred HHHHHHHHcCCCEEEECCCCCCcCcCHHHHHHHHHHHHHHHHHHHHHhCCEEEEe
Confidence 4677888899998888877541 1 24556677888887763
No 142
>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*
Probab=31.02 E-value=3.3e+02 Score=25.43 Aligned_cols=118 Identities=15% Similarity=0.181 Sum_probs=63.8
Q ss_pred EEEEEecCcccHHHHHHHHHHcCcEEEEechhHHHHHHCCCeeEEecccCCCCCCCCCcccccccccccccccCCCCHHh
Q 007518 77 QALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLENAGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKHH 156 (600)
Q Consensus 77 rALISVsDK~glv~~Ak~L~~lGfeIiATgGTAk~L~e~GI~v~~VskiTGfPEildGRVKTLHPkIhGGILarr~~~~h 156 (600)
++||+....-=-..+|+.|.+.|++++.++-....+++. ..+ +++++..+ -++-.+++.
T Consensus 2 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~------~~~-------~~~~~~~~--------~~Dv~~~~~ 60 (248)
T 3asu_A 2 IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQEL------KDE-------LGDNLYIA--------QLDVRNRAA 60 (248)
T ss_dssp EEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHH------HHH-------HCTTEEEE--------ECCTTCHHH
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHH------HHH-------hcCceEEE--------EcCCCCHHH
Confidence 456655543223678999999999999986655544431 001 11222211 122234555
Q ss_pred HHHHHHc---CCCceeEEEEecc------CcHHhhhcCCCCChhhhhh--ccccchH-HHHHHHH-----HCCCCEEEEe
Q 007518 157 MDALSEH---GIGTFDLVVVNLY------PFYDKVTSAGGIDFEDGIE--NIDIGGP-AMIRAAA-----KNHKDVLVVV 219 (600)
Q Consensus 157 ~~~l~~~---~I~~IDlVVVNLY------PFe~tv~~~~~~~~ee~IE--nIDIGGp-smiRAAA-----KN~~~V~Vv~ 219 (600)
++++-+. ..++||+||.|-= ||.+ .+.++.-+ ++..-|+ -|+|++. ++..+++.++
T Consensus 61 v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~-------~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~is 133 (248)
T 3asu_A 61 IEEMLASLPAEWCNIDILVNNAGLALGMEPAHK-------ASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIG 133 (248)
T ss_dssp HHHHHHTSCTTTCCCCEEEECCCCCCCCSCGGG-------SCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEC
T ss_pred HHHHHHHHHHhCCCCCEEEECCCcCCCCCchhh-------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEc
Confidence 5555432 2458999998852 3332 23333222 3445554 4567765 3456777777
Q ss_pred CCC
Q 007518 220 GSE 222 (600)
Q Consensus 220 dP~ 222 (600)
+..
T Consensus 134 S~~ 136 (248)
T 3asu_A 134 STA 136 (248)
T ss_dssp CGG
T ss_pred cch
Confidence 654
No 143
>3dmy_A Protein FDRA; predicted actyl-COA synthetase, nysgrc, PSI-II, STRU genomics, protein structure initiative; 2.07A {Escherichia coli}
Probab=30.96 E-value=28 Score=37.86 Aligned_cols=64 Identities=13% Similarity=0.177 Sum_probs=44.1
Q ss_pred HHHHHHHHHcCCccCceEEeecccccCCccchHHHHHHCCCeEEecCCCC-CCch-HHHHHHHhcCcEEE
Q 007518 524 ESLRIAMKKAGDEVKGAALASDAFFPFAWKDAVEEACENGIGVIAEPGGS-IRDG-DAIDCCNKYGVALL 591 (600)
Q Consensus 524 ds~~iA~~kA~~~~~GavlASDAFFPF~~~D~ve~Aa~aGi~aIIQPGGS-iRD~-evI~aa~e~giaMv 591 (600)
.|..-+.+.- +...=+|++-=+-| -+ |.+++|++.||++||-..|= .+|+ ++.++|.++||.++
T Consensus 25 ~~~~~~~~~p-~~~DlavI~vPa~~-v~--~~v~e~~~~Gv~~viis~Gf~~~~~~~l~~~A~~~g~rli 90 (480)
T 3dmy_A 25 RRWDSACQKL-PDANLALISVAGEY-AA--ELANQALDRNLNVMMFSDNVTLEDEIQLKTRAREKGLLVM 90 (480)
T ss_dssp SSHHHHHHHS-TTCCEEEECSCHHH-HH--HHHHHHHHTTCEEEECCCCCCHHHHHHHHHHHHHTTCCEE
T ss_pred chHHHHHhcC-CCCCEEEEecCHHH-HH--HHHHHHHhcCCCEEEECCCCCHHHHHHHHHHHHHcCCEEE
Confidence 3444444432 23444665554433 34 89999999999998887774 4555 79999999999876
No 144
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=30.82 E-value=73 Score=32.13 Aligned_cols=54 Identities=20% Similarity=0.252 Sum_probs=44.1
Q ss_pred ceEEeecccccCCccchHHHHHHCCCeEEecCCCCCCchHHHHHHHhcCcEEEecCCc
Q 007518 539 GAALASDAFFPFAWKDAVEEACENGIGVIAEPGGSIRDGDAIDCCNKYGVALLLTSVR 596 (600)
Q Consensus 539 GavlASDAFFPF~~~D~ve~Aa~aGi~aIIQPGGSiRD~evI~aa~e~giaMvfTg~R 596 (600)
+..+.-|-|-| +.++.|.++|+.-|=-=-|.-+|++..+.|.++|.++|...+|
T Consensus 80 ~~piSIDT~~~----~va~aAl~aGa~iINdvsg~~~d~~m~~~~a~~~~~vVlmh~~ 133 (280)
T 1eye_A 80 GITVSIDTMRA----DVARAALQNGAQMVNDVSGGRADPAMGPLLAEADVPWVLMHWR 133 (280)
T ss_dssp TCCEEEECSCH----HHHHHHHHTTCCEEEETTTTSSCTTHHHHHHHHTCCEEEECCC
T ss_pred CCEEEEeCCCH----HHHHHHHHcCCCEEEECCCCCCCHHHHHHHHHhCCeEEEEcCC
Confidence 77788898875 7899999999866655545546999999999999999988764
No 145
>3neh_A Renal dipeptidase family protein; structural genomics, nysgrc, dipeptide L-Leu-D-Ala, PSI-2, P structure initiative; HET: L3A; 1.64A {Listeria monocytogenes} PDB: 3lu2_A
Probab=30.71 E-value=66 Score=33.17 Aligned_cols=146 Identities=23% Similarity=0.327 Sum_probs=90.2
Q ss_pred EEEEEecCcccH---HHHHHHHHHcCcEEEE----------ec-------h-------hHHHHHHCCCeeEEec------
Q 007518 77 QALISLSDKKDL---ASLGIGLQELGYTIVS----------TG-------G-------TATSLENAGVSVTKVE------ 123 (600)
Q Consensus 77 rALISVsDK~gl---v~~Ak~L~~lGfeIiA----------Tg-------G-------TAk~L~e~GI~v~~Vs------ 123 (600)
-+|+++-.-..| ++..+.|.++|+..+. ++ | --+.+.+.|+-+ +||
T Consensus 101 a~~l~iEg~~~i~~~l~~L~~~y~lGvR~~~Lt~n~~N~~a~g~~~~~~~GLT~~G~~vV~eMnrlGmiv-DlSH~s~~t 179 (318)
T 3neh_A 101 GAMLTLEGIEPIGRDLDKLTQLLDGGVLSVGLTWNNANLAADGIMEERGAGLTRFGKDIIHLLNERKVFT-DVSHLSVKA 179 (318)
T ss_dssp EEEEEEESSGGGTTCHHHHHHHHHTTEEEEESCSSSBCSSBBBTTCTTCCCBCHHHHHHHHHHHHHTCEE-ECTTBCHHH
T ss_pred EEEEeeechhhcCCCHHHHHHHHHcCCeEEEeeecCCCccccCCCCCCCCCCChhhHHHHHHHHHcCCeE-EcCCCCHHH
Confidence 367777643222 3566777888887663 11 1 112333456633 333
Q ss_pred -----ccCCCCCCCC-CcccccccccccccccCCCCHHhHHHHHHcCCCceeEEEEeccCcHHhhhcCCCCChhhhhhcc
Q 007518 124 -----QLTCFPEMLD-GRVKTLHPNIHGGILARRDQKHHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENI 197 (600)
Q Consensus 124 -----kiTGfPEild-GRVKTLHPkIhGGILarr~~~~h~~~l~~~~I~~IDlVVVNLYPFe~tv~~~~~~~~ee~IEnI 197 (600)
+++..| +.. .-.+.|.|- .|.=.++.++++.+.| =+|-+|+||.--. ..+..+++++++.|
T Consensus 180 ~~dvl~~s~~P-iaSHSnaral~~h------~RNl~D~~l~ala~~G----Gvigv~~~~~fl~--~~~~~tl~~~~~Hi 246 (318)
T 3neh_A 180 FWETLEQAEFV-IASHSNAKAICSH------PRNLDDEQIKAMIEHD----AMIHVVFYPLFTT--NNGVADTEDVIRHI 246 (318)
T ss_dssp HHHHHHHCSSE-EESSCCBTTTSCC------TTSBCHHHHHHHHHTT----CEEEECCCHHHHC--TTSCCBHHHHHHHH
T ss_pred HHHHHHhcCCC-cccccchhhcCCC------CCCCCHHHHHHHHHcC----CEEEEEeeHHhhC--CCCCCCHHHHHHHH
Confidence 335666 654 334555542 2445567788888887 4789999995332 22268999999998
Q ss_pred cc----chHHHHHHHHHCCCCEE-------------EEeCCCCHHHHHHHHhCCCCCHHHHHHHHHH
Q 007518 198 DI----GGPAMIRAAAKNHKDVL-------------VVVGSEDYPALLEFLKGNQDDQQFRRKLAWK 247 (600)
Q Consensus 198 DI----GGpsmiRAAAKN~~~V~-------------Vv~dP~DY~~vl~eL~~G~~s~~~R~~LA~k 247 (600)
|- +|+ ++|. =+-|+++|+.++++|.. ..|.+.-++++.+
T Consensus 247 ~hi~~l~G~----------dhVgiGsDfDG~~~~p~gl~d~s~~p~L~~~L~~-g~se~~i~ki~g~ 302 (318)
T 3neh_A 247 DHICELGGL----------KNIGFGSDFDGIPDHVKGLEHVGKYQSFLETLEK-HYTKEEIEGFASR 302 (318)
T ss_dssp HHHHHTTCG----------GGEEECCCBTSCSSCBBTBSSGGGHHHHHHHHTT-TSCHHHHHHHHTH
T ss_pred HHHHHhcCC----------CeEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHh-cCCHHHHHHHHhH
Confidence 62 221 2222 25678999999999987 5899888888766
No 146
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=30.69 E-value=2.3e+02 Score=23.55 Aligned_cols=38 Identities=16% Similarity=0.225 Sum_probs=25.8
Q ss_pred cEEEEEecCcccHHHHHHHHHHcCcEEEEechhHHHHH
Q 007518 76 KQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLE 113 (600)
Q Consensus 76 ~rALISVsDK~glv~~Ak~L~~lGfeIiATgGTAk~L~ 113 (600)
.++||--.|..-...+.+.|...||++..+......++
T Consensus 4 ~~ILivdd~~~~~~~l~~~L~~~g~~v~~~~~~~~a~~ 41 (155)
T 1qkk_A 4 PSVFLIDDDRDLRKAMQQTLELAGFTVSSFASATEALA 41 (155)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHTTCEEEEESCHHHHHH
T ss_pred CEEEEEeCCHHHHHHHHHHHHHcCcEEEEECCHHHHHH
Confidence 35666555666667777888888998886655444444
No 147
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=30.65 E-value=59 Score=32.86 Aligned_cols=53 Identities=15% Similarity=0.308 Sum_probs=44.3
Q ss_pred ceEEeecccccCCccchHHHHHHCCCeEEecCCCCCCchHHHHHHHhcCcEEEecCCc
Q 007518 539 GAALASDAFFPFAWKDAVEEACENGIGVIAEPGGSIRDGDAIDCCNKYGVALLLTSVR 596 (600)
Q Consensus 539 GavlASDAFFPF~~~D~ve~Aa~aGi~aIIQPGGSiRD~evI~aa~e~giaMvfTg~R 596 (600)
+..+.-|.+-| +.++.|.++|+.-|=-=.|- +|++..+.|.++|.++|...+|
T Consensus 90 ~~piSIDT~~~----~va~aAl~aGa~iINdvsg~-~d~~~~~~~a~~~~~vVlmh~~ 142 (282)
T 1aj0_A 90 EVWISVDTSKP----EVIRESAKVGAHIINDIRSL-SEPGALEAAAETGLPVCLMHMQ 142 (282)
T ss_dssp CCEEEEECCCH----HHHHHHHHTTCCEEEETTTT-CSTTHHHHHHHHTCCEEEECCS
T ss_pred CCeEEEeCCCH----HHHHHHHHcCCCEEEECCCC-CCHHHHHHHHHhCCeEEEEccC
Confidence 77888899875 78999999998777655555 8999999999999999988765
No 148
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=30.62 E-value=3e+02 Score=26.12 Aligned_cols=32 Identities=16% Similarity=0.180 Sum_probs=24.7
Q ss_pred cEEEEEecCcccHHHHHHHHHHcCcEEEEech
Q 007518 76 KQALISLSDKKDLASLGIGLQELGYTIVSTGG 107 (600)
Q Consensus 76 ~rALISVsDK~glv~~Ak~L~~lGfeIiATgG 107 (600)
+++||+....-==..+|+.|.+.|++++.+..
T Consensus 30 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r 61 (283)
T 1g0o_A 30 KVALVTGAGRGIGREMAMELGRRGCKVIVNYA 61 (283)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence 57888877543336789999999999998754
No 149
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=30.59 E-value=1.5e+02 Score=28.20 Aligned_cols=30 Identities=17% Similarity=-0.089 Sum_probs=24.1
Q ss_pred cEEEEEecCcccHHHHHHHHHHcCcEEEEe
Q 007518 76 KQALISLSDKKDLASLGIGLQELGYTIVST 105 (600)
Q Consensus 76 ~rALISVsDK~glv~~Ak~L~~lGfeIiAT 105 (600)
+++||+-...-==..+|+.|.+.|++++.+
T Consensus 12 k~vlVTGas~GIG~aia~~la~~G~~V~~~ 41 (262)
T 3ksu_A 12 KVIVIAGGIKNLGALTAKTFALESVNLVLH 41 (262)
T ss_dssp CEEEEETCSSHHHHHHHHHHTTSSCEEEEE
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEE
Confidence 578998876433367899999999999986
No 150
>3n0w_A ABC branched chain amino acid family transporter, periplasmic ligand binding protein...; receptor family ligand binding region; HET: MSE; 1.88A {Burkholderia xenovorans}
Probab=30.57 E-value=46 Score=32.66 Aligned_cols=72 Identities=13% Similarity=0.073 Sum_probs=47.2
Q ss_pred HHHHHHHHHHcCCccCc----eEEeecccccCCccchHHHHHH-CCCeEEecCCCCCCchHHHHHHHhcCcEEEecC
Q 007518 523 RESLRIAMKKAGDEVKG----AALASDAFFPFAWKDAVEEACE-NGIGVIAEPGGSIRDGDAIDCCNKYGVALLLTS 594 (600)
Q Consensus 523 Vds~~iA~~kA~~~~~G----avlASDAFFPF~~~D~ve~Aa~-aGi~aIIQPGGSiRD~evI~aa~e~giaMvfTg 594 (600)
..++++|++..+..+.| .++.-|..=|-..-..++.+.+ .||.+||-|.+|--...+.+.|++++|+||.++
T Consensus 28 ~~g~~~a~~~i~ggi~G~~i~l~~~D~~~~~~~a~~~~~~li~~~~v~~iiG~~~s~~~~a~~~~~~~~~ip~i~~~ 104 (379)
T 3n0w_A 28 VAAVQLAIEDVGGKALGQPVKLVSADYQMKTDVALSIAREWFDRDGVDAIFDVVNSGTALAINNLVKDKKKLAFITA 104 (379)
T ss_dssp HHHHHHHHHHTTTEETTEECEEEEEECTTCHHHHHHHHHHHHHHSCCCEEEECCCHHHHHHHHHHHHHHTCEEEECS
T ss_pred HHHHHHHHHHhcCCCCCeEEEEEEeCCCCCHHHHHHHHHHHHHhCCceEEEcCCCcHHHHHHHHHHHHcCceEEEcC
Confidence 46777888776322222 2333333323221123444454 899999999999777788999999999999864
No 151
>2fp4_A Succinyl-COA ligase [GDP-forming] alpha-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.2.1.8 c.23.4.1 PDB: 2fpg_A* 2fpi_A* 2fpp_A* 1euc_A* 1eud_A*
Probab=30.51 E-value=35 Score=34.51 Aligned_cols=38 Identities=16% Similarity=0.163 Sum_probs=31.1
Q ss_pred chHHHHHHCCCeEE--ecCCCCCCch-HHHHHHHhc-CcEEE
Q 007518 554 DAVEEACENGIGVI--AEPGGSIRDG-DAIDCCNKY-GVALL 591 (600)
Q Consensus 554 D~ve~Aa~aGi~aI--IQPGGSiRD~-evI~aa~e~-giaMv 591 (600)
|.++++.++||+.| ++||=+..|. ++++.|.++ ||.|+
T Consensus 86 ~~~~e~i~~Gi~~iv~~t~G~~~~~~~~l~~~a~~~~gi~li 127 (305)
T 2fp4_A 86 AAINEAIDAEVPLVVCITEGIPQQDMVRVKHRLLRQGKTRLI 127 (305)
T ss_dssp HHHHHHHHTTCSEEEECCCCCCHHHHHHHHHHHTTCSSCEEE
T ss_pred HHHHHHHHCCCCEEEEECCCCChHHHHHHHHHHHhcCCcEEE
Confidence 88999999999993 6776554432 899999999 99876
No 152
>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*
Probab=30.50 E-value=16 Score=34.20 Aligned_cols=32 Identities=22% Similarity=-0.007 Sum_probs=22.8
Q ss_pred cEEEEEecCcccHHHHHHHHHHcCcEEEEech
Q 007518 76 KQALISLSDKKDLASLGIGLQELGYTIVSTGG 107 (600)
Q Consensus 76 ~rALISVsDK~glv~~Ak~L~~lGfeIiATgG 107 (600)
|++||+-...-=-..+|+.|.+.|++++.+.-
T Consensus 2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r 33 (257)
T 1fjh_A 2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDI 33 (257)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeC
Confidence 56777776432235788999999999888753
No 153
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=30.46 E-value=21 Score=33.84 Aligned_cols=34 Identities=12% Similarity=-0.053 Sum_probs=26.2
Q ss_pred CCcEEEEEecCcccHHHHHHHHHHcCcEEEEech
Q 007518 74 ANKQALISLSDKKDLASLGIGLQELGYTIVSTGG 107 (600)
Q Consensus 74 ~i~rALISVsDK~glv~~Ak~L~~lGfeIiATgG 107 (600)
+-|++||+....-=-..+|+.|.+.|++++.++-
T Consensus 21 m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r 54 (251)
T 3orf_A 21 MSKNILVLGGSGALGAEVVKFFKSKSWNTISIDF 54 (251)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred cCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC
Confidence 4468999887643337889999999999998864
No 154
>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2
Probab=30.39 E-value=1.3e+02 Score=29.29 Aligned_cols=129 Identities=20% Similarity=0.104 Sum_probs=58.7
Q ss_pred cEEEEEecCcccHHHHHHHHHHcCcEEEEechhHHHHHHCCCeeEEecccCCCCCCCCCcccccccccccccccCCCCHH
Q 007518 76 KQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLENAGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKH 155 (600)
Q Consensus 76 ~rALISVsDK~glv~~Ak~L~~lGfeIiATgGTAk~L~e~GI~v~~VskiTGfPEildGRVKTLHPkIhGGILarr~~~~ 155 (600)
+++||+...--=--.+++.|.+.|++++.+.-...... ...+.++.......+++|.... | +-.+++
T Consensus 2 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~-----~---Dl~d~~ 68 (372)
T 1db3_A 2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFN-----TERVDHIYQDPHTCNPKFHLHY-----G---DLSDTS 68 (372)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC--------------------------CCEEECC-----C---CSSCHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccc-----hHHHHHHhhccccCCCceEEEE-----C---CCCCHH
Confidence 46777765321124678899999999998754322110 0001111000000012232211 1 112344
Q ss_pred hHHHH-HHcCCCceeEEEEeccCcHHhhhcCCCCChhhhhhcccc-chHHHHHHHHHCC----CCEEEEeCCCCH
Q 007518 156 HMDAL-SEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDI-GGPAMIRAAAKNH----KDVLVVVGSEDY 224 (600)
Q Consensus 156 h~~~l-~~~~I~~IDlVVVNLYPFe~tv~~~~~~~~ee~IEnIDI-GGpsmiRAAAKN~----~~V~Vv~dP~DY 224 (600)
.++++ ++. .+|+||.|--+...... .-+.++.+ ++++ |--.+++++.++- ++++.+++..-|
T Consensus 69 ~~~~~~~~~---~~d~vih~A~~~~~~~~---~~~~~~~~-~~n~~~~~~l~~~~~~~~~~~~~~iv~~SS~~v~ 136 (372)
T 1db3_A 69 NLTRILREV---QPDEVYNLGAMSHVAVS---FESPEYTA-DVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELY 136 (372)
T ss_dssp HHHHHHHHH---CCSEEEECCCCCTTTTT---TSCHHHHH-HHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGG
T ss_pred HHHHHHHhc---CCCEEEECCcccCcccc---ccCHHHHH-HHHHHHHHHHHHHHHHhCCCCCcEEEEeCChhhh
Confidence 44443 333 57998887654321110 11233332 3343 4456788887765 477777765555
No 155
>1zcz_A Bifunctional purine biosynthesis protein PURH; TM1249; HET: PG4; 1.88A {Thermotoga maritima} SCOP: c.24.1.3 c.97.1.4
Probab=30.31 E-value=1e+02 Score=33.58 Aligned_cols=109 Identities=27% Similarity=0.260 Sum_probs=74.6
Q ss_pred cceeecCCCCCHHHHHHHHHHHHHHhhhcceEEEEEeCCeEEEecCCCCcHHHHHHHHHHHc--CC--ccCceEEeeccc
Q 007518 472 QFKVVSEKKPQESELHDAEFAWLCVKHVKSNAIVIAKNNCMLGMGSGQPNRRESLRIAMKKA--GD--EVKGAALASDAF 547 (600)
Q Consensus 472 ~~~vVT~~~Pt~~e~~dL~FAwkvvKhvKSNAIV~ak~~~tvGiGaGQ~sRVds~~iA~~kA--~~--~~~GavlASDAF 547 (600)
.++.+-.++.+---+.|+.-||++++-.+.+|.|+.|..---|++-|.+ +..|-.|| .| +.=|.++|---
T Consensus 199 ~~~qL~GKelSYNNi~DadaA~~lv~ef~~Pa~aivKH~nPCGvA~g~~-----l~~Ay~~A~~~Dp~SaFGGiiA~Nr- 272 (464)
T 1zcz_A 199 FEILHEGKTISFNNILDAENAWFMAKNLPRMGAVVVKHQSPCGAAIGED-----KVEIVKKAIEADDESSFGGILAVNF- 272 (464)
T ss_dssp EEEECSSSCCCHHHHHHHHHHHHHHHTCSSSEEEEEETTEEEEEEECSC-----HHHHHHHHHHHTTTTTTTEEEEESS-
T ss_pred cceeccCccCCcchhhhhHHHHHHHHhcCCCeEEEEecCCccceecCcc-----hHHHHHHHHhcCCccccCCEEEEcC-
Confidence 5566767777999999999999999999999999999999888888854 56666666 23 23355555221
Q ss_pred ccCCccchHHHHHH--CCCeEEecCCCCCCchHHHHHHHhcCcEEEecC
Q 007518 548 FPFAWKDAVEEACE--NGIGVIAEPGGSIRDGDAIDCCNKYGVALLLTS 594 (600)
Q Consensus 548 FPF~~~D~ve~Aa~--aGi~aIIQPGGSiRD~evI~aa~e~giaMvfTg 594 (600)
|.. .+.|-+ .=...||.||=+ +|..+.-.+-|+-++-.+
T Consensus 273 -~vD----~~tA~~i~~F~EvVIAP~~~---~eAleiL~KKnlRlL~~~ 313 (464)
T 1zcz_A 273 -EMD----EEVAKSLKKYLEVIVAPSFT---QEAIEVLSKKKVRLLKPG 313 (464)
T ss_dssp -CBC----HHHHHHCCSCEEEEECSCBC---HHHHHHHTTSSCEEEEEC
T ss_pred -ccC----HHHHHhhhheEEEEEcCCCC---HHHHHHHhcCCeEEEEEC
Confidence 223 222222 235688999864 555555566677666443
No 156
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=30.16 E-value=77 Score=30.99 Aligned_cols=121 Identities=11% Similarity=0.111 Sum_probs=66.3
Q ss_pred cEEEEEecCcccHHHHHHHHHHcCcEEEEechhHHHHHHCCCeeEEecccCCCCCCCCCcccccccccccccccCCCCHH
Q 007518 76 KQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLENAGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKH 155 (600)
Q Consensus 76 ~rALISVsDK~glv~~Ak~L~~lGfeIiATgGTAk~L~e~GI~v~~VskiTGfPEildGRVKTLHPkIhGGILarr~~~~ 155 (600)
|+|||+-.-+-==..+|+.|.+.|++++.+.-..+.+++. .+ + .+++..++ ++=.+++
T Consensus 3 K~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~-------~~-----~--~~~~~~~~--------~Dv~~~~ 60 (247)
T 3ged_A 3 RGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADF-------AK-----E--RPNLFYFH--------GDVADPL 60 (247)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-------HT-----T--CTTEEEEE--------CCTTSHH
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-------HH-----h--cCCEEEEE--------ecCCCHH
Confidence 6788888765434688999999999999998776666541 11 0 12332221 2223445
Q ss_pred hHHHHH---HcCCCceeEEEEeccCcHHhhhcCCCCChhhhhhccc--cchHH-HHHHHH----HCCCCEEEEeC
Q 007518 156 HMDALS---EHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENID--IGGPA-MIRAAA----KNHKDVLVVVG 220 (600)
Q Consensus 156 h~~~l~---~~~I~~IDlVVVNLYPFe~tv~~~~~~~~ee~IEnID--IGGps-miRAAA----KN~~~V~Vv~d 220 (600)
.++++- ....+.||++|.|-=-+...--. +.+.|+.=+.+| .-||= |.|++. |+.-++..+++
T Consensus 61 ~v~~~v~~~~~~~g~iDiLVNNAG~~~~~~~~--~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~G~IInisS 133 (247)
T 3ged_A 61 TLKKFVEYAMEKLQRIDVLVNNACRGSKGILS--SLLYEEFDYILSVGLKAPYELSRLCRDELIKNKGRIINIAS 133 (247)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCCCCCCCGGG--TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECC
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcc--cCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCcEEEEee
Confidence 554432 22346899999987221111111 344444444444 34543 445554 45555555554
No 157
>2b3z_A Riboflavin biosynthesis protein RIBD; alpha/beta/alpha, deaminase domain and reductase domain, hydrolase, oxidoreductase; 2.41A {Bacillus subtilis} SCOP: c.71.1.2 c.97.1.2 PDB: 2d5n_A* 3ex8_A*
Probab=30.12 E-value=57 Score=33.84 Aligned_cols=99 Identities=22% Similarity=0.311 Sum_probs=67.5
Q ss_pred HHHHHHHHhhhc----ce---EEEEEeCCeEEEecCCCC-cHHHHHHHHHHHcCCccCceEEeecccccC------Cccc
Q 007518 489 AEFAWLCVKHVK----SN---AIVIAKNNCMLGMGSGQP-NRRESLRIAMKKAGDEVKGAALASDAFFPF------AWKD 554 (600)
Q Consensus 489 L~FAwkvvKhvK----SN---AIV~ak~~~tvGiGaGQ~-sRVds~~iA~~kA~~~~~GavlASDAFFPF------~~~D 554 (600)
|..|...++.-. -| .-||++||+.||.|-=+. ....|-..|+.+|++.++|+.|-. -..|= + =
T Consensus 18 m~~A~~~A~~~~~~~~~~~~vGaviv~~g~ii~~g~n~~~~~~HAE~~Ai~~a~~~~~g~tlyv-TlePC~~~G~t~--~ 94 (373)
T 2b3z_A 18 MKLALDLAKQGEGQTESNPLVGAVVVKDGQIVGMGAHLKYGEAHAEVHAIHMAGAHAEGADIYV-TLEPCSHYGKTP--P 94 (373)
T ss_dssp HHHHHHHHGGGTTSSTTSCCCEEEEESSSSEEEEEECCSTTSCCHHHHHHHHHGGGGTTCEEEE-SSCCCCCCSSSC--C
T ss_pred HHHHHHHHHhhCcccCCCCcEEEEEEECCEEEEEEeCCCCCCcCHHHHHHHHhhHhcCCeEEEE-eCCCccCcCCCh--H
Confidence 455555555431 12 446669999999986443 355778889999998899988766 34576 5 6
Q ss_pred hHHHHHHCCCeEEec----CCCCCCchHHHHHHHhcCcEEE
Q 007518 555 AVEEACENGIGVIAE----PGGSIRDGDAIDCCNKYGVALL 591 (600)
Q Consensus 555 ~ve~Aa~aGi~aIIQ----PGGSiRD~evI~aa~e~giaMv 591 (600)
|.+...++||+.|+= |-..+. ...++.-.++||.+.
T Consensus 95 C~~ai~~agi~rVv~~~~d~~~~~~-g~~~~~l~~~gi~v~ 134 (373)
T 2b3z_A 95 CAELIINSGIKRVFVAMRDPNPLVA-GRGISMMKEAGIEVR 134 (373)
T ss_dssp HHHHHHHHTCCEEEESSCCSCTTTT-THHHHHHHTTTCEEE
T ss_pred HHHHHHHhCCCEEEEEecccchhhh-hHHHHHHHhCCeEEE
Confidence 999999999999984 111110 124666678888764
No 158
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=30.07 E-value=39 Score=33.93 Aligned_cols=36 Identities=8% Similarity=0.264 Sum_probs=15.6
Q ss_pred HHHHHHCCCeEEecCCCCCCch-HHHHHHHhcCcEEE
Q 007518 556 VEEACENGIGVIAEPGGSIRDG-DAIDCCNKYGVALL 591 (600)
Q Consensus 556 ve~Aa~aGi~aIIQPGGSiRD~-evI~aa~e~giaMv 591 (600)
++.++++||..+|-|.-...+. |.+++|++||+..+
T Consensus 118 ~~~~~~aGvdGvIipDlp~ee~~~~~~~~~~~gl~~I 154 (271)
T 3nav_A 118 YQRCQKAGVDSVLIADVPTNESQPFVAAAEKFGIQPI 154 (271)
T ss_dssp HHHHHHHTCCEEEETTSCGGGCHHHHHHHHHTTCEEE
T ss_pred HHHHHHCCCCEEEECCCCHHHHHHHHHHHHHcCCeEE
Confidence 3444444444444444333221 34444444444433
No 159
>2g6v_A Riboflavin biosynthesis protein RIBD; RIBD APO structure, structural genomics, structural proteomi europe, spine, hydrolase, oxidoreductase; 2.60A {Escherichia coli} PDB: 2obc_A* 2o7p_A*
Probab=29.93 E-value=54 Score=34.46 Aligned_cols=99 Identities=18% Similarity=0.264 Sum_probs=62.0
Q ss_pred HHHHHHHHhhhc---c----eEEEEEeCCeEEEecCCCC-cHHHHHHHHHHHcCCccCceEEeecccccC------Cccc
Q 007518 489 AEFAWLCVKHVK---S----NAIVIAKNNCMLGMGSGQP-NRRESLRIAMKKAGDEVKGAALASDAFFPF------AWKD 554 (600)
Q Consensus 489 L~FAwkvvKhvK---S----NAIV~ak~~~tvGiGaGQ~-sRVds~~iA~~kA~~~~~GavlASDAFFPF------~~~D 554 (600)
|..|...++.-. + =.-|+++||+.||.|.-+. ....|-..|+.+|+++++|+.|-. -..|= + =
T Consensus 34 m~~A~~~A~~~~~~~~~~~~vGaviv~~g~ii~~g~n~~~g~~HAE~~Ai~~a~~~~~g~tlyv-t~ePC~h~G~tp--~ 110 (402)
T 2g6v_A 34 MARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGEPHAEVHALRMAGEKAKGATAYV-TLEPCSHHGRTP--P 110 (402)
T ss_dssp HHHHHHHHHTTTTTCTTSCCCEEEEEETTEEEEEEECCCTTSCCHHHHHHHHHGGGGGSSCEEE-SSCCC---------C
T ss_pred HHHHHHHHHhhCccCCCCCCEEEEEEECCEEEEEEeCCCCCccHHHHHHHHHhhHhcCCeEEEE-eCCCcCCCCCch--H
Confidence 556666665432 1 2446668999999996443 345777789999988788877665 34466 4 5
Q ss_pred hHHHHHHCCCeEEec----CCCCCCchHHHHHHHhcCcEEE
Q 007518 555 AVEEACENGIGVIAE----PGGSIRDGDAIDCCNKYGVALL 591 (600)
Q Consensus 555 ~ve~Aa~aGi~aIIQ----PGGSiRD~evI~aa~e~giaMv 591 (600)
|......+||+.|+= |--.+. ..-++.-.++||.+.
T Consensus 111 C~~ai~~agi~rVv~~~~~~~~~~~-g~g~~~l~~~gi~v~ 150 (402)
T 2g6v_A 111 CCDALIAAGVARVVASMQDPNPQVA-GRGLYRLQQAGIDVS 150 (402)
T ss_dssp CHHHHHHTTCSCEEESSCCCSCSSS-TTHHHHHHHTTCCEE
T ss_pred HHHHHHHhCCCEEEEEecCCCcccc-chHHHHHHhCCcEEE
Confidence 788888888888764 111110 013555566777654
No 160
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=29.92 E-value=81 Score=29.98 Aligned_cols=39 Identities=15% Similarity=-0.034 Sum_probs=29.9
Q ss_pred cEEEEEecCcccHHHHHHHHHHcCcEEEEechhHHHHHH
Q 007518 76 KQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLEN 114 (600)
Q Consensus 76 ~rALISVsDK~glv~~Ak~L~~lGfeIiATgGTAk~L~e 114 (600)
+++||+-...-==..+|+.|.+.|++++.++-....+++
T Consensus 31 k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~ 69 (281)
T 3ppi_A 31 ASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKA 69 (281)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHH
Confidence 578998875433367899999999999998776665554
No 161
>3p9z_A Uroporphyrinogen III cosynthase (HEMD); MCSG, PSI2, structural genomics, protein structure initiativ midwest center for structural genomics; HET: MSE; 2.10A {Helicobacter pylori}
Probab=29.81 E-value=31 Score=32.78 Aligned_cols=106 Identities=17% Similarity=0.147 Sum_probs=55.0
Q ss_pred cCcEEEEec-hhHHHHHHCCCeeEEecc-cC--CCCCCC-----CCcccccccccccccccCCCCHHhHHHHHHcCCCce
Q 007518 98 LGYTIVSTG-GTATSLENAGVSVTKVEQ-LT--CFPEML-----DGRVKTLHPNIHGGILARRDQKHHMDALSEHGIGTF 168 (600)
Q Consensus 98 lGfeIiATg-GTAk~L~e~GI~v~~Vsk-iT--GfPEil-----dGRVKTLHPkIhGGILarr~~~~h~~~l~~~~I~~I 168 (600)
.+..+++-| +|++.|++.|+.+..+-+ .+ +.=+.| +.|| |+|. |-..| +.-.+.|+++|+.-.
T Consensus 66 ~~~~i~aVG~~Ta~aL~~~G~~~~~~p~~~~~e~L~~~l~~~~~~~~v--L~~r---g~~~~---~~L~~~L~~~G~~v~ 137 (229)
T 3p9z_A 66 QNIPAYALSEPTAKTLQDHHFKVAFMGEKAHGKEFVQEIFPLLEKKSV--LYLR---AKEIV---SSLDTILLEHGIDFK 137 (229)
T ss_dssp HTSCEEESSHHHHHHHHHTTCCBCCCCC---------CCHHHHTTCEE--EEEE---ESSCS---SCHHHHHHHTTCEEE
T ss_pred cCCcEEEECHHHHHHHHHcCCCeeecCCcccHHHHHHHHHhhCCCCEE--EEEC---Cccch---HHHHHHHHHCCCeEE
Confidence 367899887 899999999998765543 21 111111 2233 3332 22222 223356888898655
Q ss_pred eEEEEeccCcHHhhhcCCCCChhhhhhccccchHHHHHHHHHCCCCEEEEeCCCCHHHHHHHH
Q 007518 169 DLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGPAMIRAAAKNHKDVLVVVGSEDYPALLEFL 231 (600)
Q Consensus 169 DlVVVNLYPFe~tv~~~~~~~~ee~IEnIDIGGpsmiRAAAKN~~~V~Vv~dP~DY~~vl~eL 231 (600)
.++|-.--| . ..+ .+.++.++ ...-+++++++|+--+.+++.+
T Consensus 138 ~~~vY~~~~------~--~~~-~~~~~~l~-----------~~~~d~v~ftS~s~v~~~~~~~ 180 (229)
T 3p9z_A 138 QAVVYENKL------K--HLT-LSEQNALK-----------PKEKSILIFTAISHAKAFLHYF 180 (229)
T ss_dssp EEEEEEEEE------C--CCC-HHHHHHHS-----------CCTTCEEEECSHHHHHHHHHHS
T ss_pred EEEEEEeeC------C--Ccc-HHHHHHHh-----------cCCCeEEEEECHHHHHHHHHHh
Confidence 544433322 1 111 12222222 2234677778887666665544
No 162
>3i09_A Periplasmic branched-chain amino acid-binding Pro; type I periplasmic binding protein, structural genomics, JOI for structural genomics; HET: MSE CIT; 1.80A {Burkholderia mallei}
Probab=29.58 E-value=43 Score=32.72 Aligned_cols=73 Identities=12% Similarity=0.105 Sum_probs=48.4
Q ss_pred HHHHHHHHHHHcCCccCc----eEEeecccccCCccchHHHHHH-CCCeEEecCCCCCCchHHHHHHHhcCcEEEecC
Q 007518 522 RRESLRIAMKKAGDEVKG----AALASDAFFPFAWKDAVEEACE-NGIGVIAEPGGSIRDGDAIDCCNKYGVALLLTS 594 (600)
Q Consensus 522 RVds~~iA~~kA~~~~~G----avlASDAFFPF~~~D~ve~Aa~-aGi~aIIQPGGSiRD~evI~aa~e~giaMvfTg 594 (600)
-..++++|++..+....| .++.-|..=|-..-..++.+.+ .||.+||-|.+|---..+.+.|++++|+||..+
T Consensus 25 ~~~g~~~A~~~~~ggi~G~~i~l~~~D~~~~~~~a~~~~~~li~~~~v~~iiG~~~s~~~~a~~~~~~~~~ip~i~~~ 102 (375)
T 3i09_A 25 GLEAIKMAVADFGGKVNGKPIEVVYADHQNKADIAASKAREWMDRGGLDLLVGGTNSATALSMNQVAAEKKKVYINIG 102 (375)
T ss_dssp HHHHHHHHHHHHTSEETTEEEEEEEEECTTCHHHHHHHHHHHHHHSCEEEEEECSCHHHHHHHHHHHHHHTCEEEECS
T ss_pred HHHHHHHHHHHhCCCCCCeEEEEEEecCCCCHHHHHHHHHHHHhhCCCEEEECCCCcHHHHHHHHHHHHcCceEEEeC
Confidence 346777787776322222 2333333333322234455555 899999999998777789999999999999864
No 163
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=29.57 E-value=41 Score=32.80 Aligned_cols=40 Identities=15% Similarity=0.368 Sum_probs=31.0
Q ss_pred chHHHHHHCCCeEEe-----cCCCCCCc----hHHHHHHHhcCcEEEec
Q 007518 554 DAVEEACENGIGVIA-----EPGGSIRD----GDAIDCCNKYGVALLLT 593 (600)
Q Consensus 554 D~ve~Aa~aGi~aII-----QPGGSiRD----~evI~aa~e~giaMvfT 593 (600)
|.++.+.+..+++|+ -|+|.+-| +++.+.|++||+.++.=
T Consensus 145 ~~l~~~l~~~~~~v~~~~~~nptG~~~~~~~l~~i~~la~~~~~~li~D 193 (375)
T 3op7_A 145 EKLRQLIRPTTKMICINNANNPTGAVMDRTYLEELVEIASEVGAYILSD 193 (375)
T ss_dssp HHHHHHCCTTCCEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEE
T ss_pred HHHHHhhccCCeEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEE
Confidence 566666666777776 68888888 57888999999988863
No 164
>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*
Probab=29.23 E-value=3.7e+02 Score=25.75 Aligned_cols=30 Identities=20% Similarity=0.126 Sum_probs=19.9
Q ss_pred cEEEEEecCcccHHHHHHHHHHcCcEEEEe
Q 007518 76 KQALISLSDKKDLASLGIGLQELGYTIVST 105 (600)
Q Consensus 76 ~rALISVsDK~glv~~Ak~L~~lGfeIiAT 105 (600)
+++||+...--=--.+++.|.+.|++++++
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~ 32 (348)
T 1ek6_A 3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVI 32 (348)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHTTCCEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEE
Confidence 567777652111236778888888888876
No 165
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=29.07 E-value=85 Score=29.86 Aligned_cols=39 Identities=26% Similarity=0.307 Sum_probs=29.3
Q ss_pred cEEEEEecCcccHHHHHHHHHHcCcEEEEechhHHHHHH
Q 007518 76 KQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLEN 114 (600)
Q Consensus 76 ~rALISVsDK~glv~~Ak~L~~lGfeIiATgGTAk~L~e 114 (600)
|++||+-...-==..+|+.|.+.|++++.++-....+++
T Consensus 21 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~ 59 (266)
T 4egf_A 21 KRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDA 59 (266)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence 578988875433367899999999999998766555543
No 166
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=28.82 E-value=1.2e+02 Score=30.50 Aligned_cols=41 Identities=22% Similarity=0.209 Sum_probs=31.9
Q ss_pred CcccHHHHHHHHHHcCcEE--EEechhHHHHHHCCCeeEEecc
Q 007518 84 DKKDLASLGIGLQELGYTI--VSTGGTATSLENAGVSVTKVEQ 124 (600)
Q Consensus 84 DK~glv~~Ak~L~~lGfeI--iATgGTAk~L~e~GI~v~~Vsk 124 (600)
+-.-++.+|+.|.+.|+++ ++++...+.+.+.|+++..+..
T Consensus 13 H~~p~l~la~~L~~~Gh~V~~~~~~~~~~~v~~~g~~~~~~~~ 55 (416)
T 1rrv_A 13 DVEIGVALADRLKALGVQTRMCAPPAAEERLAEVGVPHVPVGL 55 (416)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHTCCEEECSC
T ss_pred cHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHHcCCeeeecCC
Confidence 4455788999999999775 4556667788899999887764
No 167
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=28.67 E-value=68 Score=30.63 Aligned_cols=37 Identities=24% Similarity=0.196 Sum_probs=27.6
Q ss_pred cEEEEEec-CcccH-HHHHHHHHHcCcEEEEechhHHHH
Q 007518 76 KQALISLS-DKKDL-ASLGIGLQELGYTIVSTGGTATSL 112 (600)
Q Consensus 76 ~rALISVs-DK~gl-v~~Ak~L~~lGfeIiATgGTAk~L 112 (600)
|+|||+-. .-.|| ..+|+.|.+.|.+++-++-+.+.+
T Consensus 7 K~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~ 45 (256)
T 4fs3_A 7 KTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSR 45 (256)
T ss_dssp CEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGH
T ss_pred CEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHH
Confidence 57899874 34566 678999999999999886544333
No 168
>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}
Probab=28.45 E-value=50 Score=31.10 Aligned_cols=33 Identities=12% Similarity=-0.043 Sum_probs=25.5
Q ss_pred cEEEEEecCcccHHHHHHHHHHcCcEEEEechh
Q 007518 76 KQALISLSDKKDLASLGIGLQELGYTIVSTGGT 108 (600)
Q Consensus 76 ~rALISVsDK~glv~~Ak~L~~lGfeIiATgGT 108 (600)
+++||+-...-==..+|+.|.+.|++++.+.-.
T Consensus 10 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~ 42 (257)
T 3tl3_A 10 AVAVVTGGASGLGLATTKRLLDAGAQVVVLDIR 42 (257)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESS
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCc
Confidence 578998875433357899999999999988653
No 169
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=28.31 E-value=1.3e+02 Score=27.57 Aligned_cols=38 Identities=21% Similarity=0.236 Sum_probs=27.1
Q ss_pred cEEEEEecCcccHHHHHHHHHHcCcEEEEechhHHHHH
Q 007518 76 KQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLE 113 (600)
Q Consensus 76 ~rALISVsDK~glv~~Ak~L~~lGfeIiATgGTAk~L~ 113 (600)
+++||+....-=-..+++.|.+.|++++.+.-....++
T Consensus 8 ~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~ 45 (248)
T 2pnf_A 8 KVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAK 45 (248)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHH
Confidence 46788776433236788999999999999876554443
No 170
>1ece_A Endocellulase E1; glycosyl hydrolase; HET: BGC; 2.40A {Acidothermus cellulolyticus} SCOP: c.1.8.3 PDB: 1vrx_A
Probab=28.15 E-value=48 Score=32.78 Aligned_cols=40 Identities=20% Similarity=0.399 Sum_probs=30.9
Q ss_pred chHHHHHHCCCeEE--------ecCC---CCCCc----------------hHHHHHHHhcCcEEEec
Q 007518 554 DAVEEACENGIGVI--------AEPG---GSIRD----------------GDAIDCCNKYGVALLLT 593 (600)
Q Consensus 554 D~ve~Aa~aGi~aI--------IQPG---GSiRD----------------~evI~aa~e~giaMvfT 593 (600)
+-++.++++|+.+| ++|+ |.+.. +++|+.|.++||-++.+
T Consensus 48 ~~~~~~~~~G~n~vRi~~~~~~~~~~~~~~~~~~~~~np~~~g~~~~~~ld~~v~~a~~~Gi~vild 114 (358)
T 1ece_A 48 SMLDQIKSLGYNTIRLPYSDDILKPGTMPNSINFYQMNQDLQGLTSLQVMDKIVAYAGQIGLRIILD 114 (358)
T ss_dssp HHHHHHHHTTCCEEEEEEEGGGGSTTCCCCSCCCSSSCTTTTTCCHHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHcCCCEEEeeccHHHhcCCCCCccccccccCccccCccHHHHHHHHHHHHHHCCCEEEEe
Confidence 77888889998887 5665 34431 67999999999998865
No 171
>3rhg_A Putative phophotriesterase; hydrolase, amidohydrolase, zinc binding site, enzyme functio initiative, EFI; HET: SO4; 1.53A {Proteus mirabilis}
Probab=28.14 E-value=42 Score=34.85 Aligned_cols=40 Identities=20% Similarity=0.189 Sum_probs=30.4
Q ss_pred HHHHHHCCCeEEecCCCC---CCch-HHHHHHHhcCcEE-EecCC
Q 007518 556 VEEACENGIGVIAEPGGS---IRDG-DAIDCCNKYGVAL-LLTSV 595 (600)
Q Consensus 556 ve~Aa~aGi~aIIQPGGS---iRD~-evI~aa~e~giaM-vfTg~ 595 (600)
++.+.++||+.||.|+|. -||- .+.+.|.++||.. .-||.
T Consensus 81 l~~~~~aGv~tiV~~~g~~g~~r~~~~l~~la~~~gi~i~~~tG~ 125 (365)
T 3rhg_A 81 LNNFKELGGKTIVDATGSSSIGRDIRKLKQVAELTGINVVASSGL 125 (365)
T ss_dssp HHHHHHTTEEEEEECCCSGGGTCCHHHHHHHHHHHCCEEECEECC
T ss_pred HHHHHhcCCCeEEEcCCCCCCCCCHHHHHHHHHHHCCcEEEEeCc
Confidence 466779999999999954 3887 5667899999854 44554
No 172
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=28.11 E-value=2e+02 Score=27.50 Aligned_cols=33 Identities=12% Similarity=0.193 Sum_probs=25.7
Q ss_pred CcEEEEEecCcccHHHHHHHHHHcCcEEEEech
Q 007518 75 NKQALISLSDKKDLASLGIGLQELGYTIVSTGG 107 (600)
Q Consensus 75 i~rALISVsDK~glv~~Ak~L~~lGfeIiATgG 107 (600)
-+++||+-...-==..+|+.|.+.|++++.++-
T Consensus 31 gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r 63 (273)
T 3uf0_A 31 GRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGR 63 (273)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcC
Confidence 357999887543336789999999999998864
No 173
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=28.05 E-value=3.2e+02 Score=26.34 Aligned_cols=34 Identities=18% Similarity=0.138 Sum_probs=26.5
Q ss_pred cEEEEEecCc-ccH-HHHHHHHHHcCcEEEEechhH
Q 007518 76 KQALISLSDK-KDL-ASLGIGLQELGYTIVSTGGTA 109 (600)
Q Consensus 76 ~rALISVsDK-~gl-v~~Ak~L~~lGfeIiATgGTA 109 (600)
|++||+...- .|| ..+|+.|.+.|++++.+.-+.
T Consensus 32 k~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~ 67 (293)
T 3grk_A 32 KRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGD 67 (293)
T ss_dssp CEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSH
T ss_pred CEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCH
Confidence 5799998753 344 578999999999999986553
No 174
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=27.99 E-value=3.1e+02 Score=26.21 Aligned_cols=127 Identities=17% Similarity=0.221 Sum_probs=64.4
Q ss_pred cEEEEEecCcccHHHHHHHHHHcCcEEEEech-hHHHHHHCCCeeEEecccCCCCCCCCCcccccccccccccccCCCCH
Q 007518 76 KQALISLSDKKDLASLGIGLQELGYTIVSTGG-TATSLENAGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQK 154 (600)
Q Consensus 76 ~rALISVsDK~glv~~Ak~L~~lGfeIiATgG-TAk~L~e~GI~v~~VskiTGfPEildGRVKTLHPkIhGGILarr~~~ 154 (600)
|++||+....-==..+|+.|.+.|++++.++- ..+.+++. ..++. +..++++..+. +=+ .++
T Consensus 26 k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~------~~~~~---~~~~~~~~~~~-----~Dv---~d~ 88 (281)
T 3v2h_A 26 KTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTV------TDEVA---GLSSGTVLHHP-----ADM---TKP 88 (281)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHH------HHHHH---TTCSSCEEEEC-----CCT---TCH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHH------HHHHh---hccCCcEEEEe-----CCC---CCH
Confidence 57899887543336789999999999998765 33333321 00111 01123443322 112 234
Q ss_pred HhHHHHHH---cCCCceeEEEEeccCcH-HhhhcCCCCChhhhhhc--cccchH-HHHHHHH-----HCCCCEEEEeCCC
Q 007518 155 HHMDALSE---HGIGTFDLVVVNLYPFY-DKVTSAGGIDFEDGIEN--IDIGGP-AMIRAAA-----KNHKDVLVVVGSE 222 (600)
Q Consensus 155 ~h~~~l~~---~~I~~IDlVVVNLYPFe-~tv~~~~~~~~ee~IEn--IDIGGp-smiRAAA-----KN~~~V~Vv~dP~ 222 (600)
+.++++-+ ...++||+||.|-=... ..+. +.+.++.-+. +..-|+ -++|++. ++..+++.+++..
T Consensus 89 ~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~---~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~ 165 (281)
T 3v2h_A 89 SEIADMMAMVADRFGGADILVNNAGVQFVEKIE---DFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAH 165 (281)
T ss_dssp HHHHHHHHHHHHHTSSCSEEEECCCCCCCCCGG---GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGG
T ss_pred HHHHHHHHHHHHHCCCCCEEEECCCCCCCCCcc---cCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCcc
Confidence 44433221 12358999998854221 1111 2244443333 334444 4667663 3445677776644
No 175
>3d8t_A Uroporphyrinogen-III synthase; heme biosynthesis, lyase; 1.60A {Thermus thermophilus} PDB: 3d8r_A 3d8s_A 3d8n_A
Probab=27.71 E-value=80 Score=30.80 Aligned_cols=120 Identities=19% Similarity=0.130 Sum_probs=66.0
Q ss_pred cccHHHHHHHHHHc---------CcEEEEec-hhHHHHHHCCCeeEEecccCCCCCCCCCcccccccccccc--cccCC-
Q 007518 85 KKDLASLGIGLQEL---------GYTIVSTG-GTATSLENAGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGG--ILARR- 151 (600)
Q Consensus 85 K~glv~~Ak~L~~l---------GfeIiATg-GTAk~L~e~GI~v~~VskiTGfPEildGRVKTLHPkIhGG--ILarr- 151 (600)
+.++.-|.+.|.+. +..+++-| +|++.|++.|+.+..+.+.+ .| |-++.|-+ |. ||.-|
T Consensus 93 ~naV~~~~~~l~~~~~~~~~~l~~~~i~aVG~~Ta~aL~~~G~~~~~~p~~~--~e---~L~~~l~~---g~~~vLi~r~ 164 (286)
T 3d8t_A 93 GVGVRDLLEAGKALGLDLEGPLAKAFRLARGAKAARALKEAGLPPHAVGDGT--SK---SLLPLLPQ---GRGVAALQLY 164 (286)
T ss_dssp HHHHHHHHHHHHHTTCCCHHHHHHSEEEESSHHHHHHHHHTTCCCSEECSSS--GG---GGGGGCCC---CCSEEEEECS
T ss_pred HHHHHHHHHHHHHcCchHHHHhcCCeEEEECHHHHHHHHHcCCCcccccccc--HH---HHHHHHHc---CCceEEEEcc
Confidence 45666666666554 35688865 79999999999876665322 11 22222222 22 22222
Q ss_pred --CCHHhHHHHHHcCCCceeEEEEeccCcHHhhhcCCCCChhhhhhccccchHHHHHHHHHCCCCEEEEeCCCCHHHHHH
Q 007518 152 --DQKHHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGPAMIRAAAKNHKDVLVVVGSEDYPALLE 229 (600)
Q Consensus 152 --~~~~h~~~l~~~~I~~IDlVVVNLYPFe~tv~~~~~~~~ee~IEnIDIGGpsmiRAAAKN~~~V~Vv~dP~DY~~vl~ 229 (600)
..+.-.+.|++.|+. ++.+-+|- ++.. ....+++++ .-...--+++++++|+--..+++
T Consensus 165 ~~~~~~L~~~L~~~G~~---v~~~~~Y~---~~~~--~~~~~~~~~-----------~l~~~~~d~v~FtS~~~v~~~~~ 225 (286)
T 3d8t_A 165 GKPLPLLENALAERGYR---VLPLMPYR---HLPD--PEGILRLEE-----------AVLRGEVDALAFVAAIQVEFLFE 225 (286)
T ss_dssp SSCCHHHHHHHHHTTCE---EEEECSEE---EEEC--HHHHHHHHH-----------HHHTTCCSEEEESSHHHHHHHHH
T ss_pred CcccHHHHHHHHHCCCE---EEEEEEEE---EecC--cccHHHHHH-----------HHHcCCCCEEEEECHHHHHHHHH
Confidence 234555778888864 55555552 2211 001122222 22223357888999987777776
Q ss_pred HH
Q 007518 230 FL 231 (600)
Q Consensus 230 eL 231 (600)
.+
T Consensus 226 ~~ 227 (286)
T 3d8t_A 226 GA 227 (286)
T ss_dssp HC
T ss_pred HH
Confidence 55
No 176
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=27.68 E-value=43 Score=30.89 Aligned_cols=14 Identities=29% Similarity=0.406 Sum_probs=6.6
Q ss_pred hHHHHHHCCCeEEe
Q 007518 555 AVEEACENGIGVIA 568 (600)
Q Consensus 555 ~ve~Aa~aGi~aII 568 (600)
.++.+.+.|++.++
T Consensus 95 ~~~~~~~~g~~~~v 108 (211)
T 3f4w_A 95 CIRAAKEAGKQVVV 108 (211)
T ss_dssp HHHHHHHHTCEEEE
T ss_pred HHHHHHHcCCeEEE
Confidence 34444445555543
No 177
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=27.67 E-value=65 Score=31.21 Aligned_cols=113 Identities=14% Similarity=0.095 Sum_probs=57.6
Q ss_pred CCCcEEEEEecCcccHHHHHHHHHHcCcEEEEechhHHHHHHCCCeeEEecccCCCCCCCCCcccccccccccccccCCC
Q 007518 73 QANKQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLENAGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRD 152 (600)
Q Consensus 73 ~~i~rALISVsDK~glv~~Ak~L~~lGfeIiATgGTAk~L~e~GI~v~~VskiTGfPEildGRVKTLHPkIhGGILarr~ 152 (600)
.+.+++||+...--=--.+++.|.+.|++++++.-... + .+|.. +-|=| .
T Consensus 17 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~-----~-----------------~~~~~-----~~~Dl---~ 66 (347)
T 4id9_A 17 RGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPS-----G-----------------TGGEE-----VVGSL---E 66 (347)
T ss_dssp ----CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCC-----S-----------------SCCSE-----EESCT---T
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCC-----C-----------------CCccE-----EecCc---C
Confidence 45567999887321124677899999999888743110 0 12211 11222 2
Q ss_pred CHHhHHHHHHcCCCceeEEEEeccCcHHhhhcCCCCChhhhhhccccc-hHHHHHHHHHCC-CCEEEEeCCCCHH
Q 007518 153 QKHHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIG-GPAMIRAAAKNH-KDVLVVVGSEDYP 225 (600)
Q Consensus 153 ~~~h~~~l~~~~I~~IDlVVVNLYPFe~tv~~~~~~~~ee~IEnIDIG-GpsmiRAAAKN~-~~V~Vv~dP~DY~ 225 (600)
+++.++++- ..+|.||.+--+..... ... +.+-++.+- --.++++|.++- ++++.+++..-|.
T Consensus 67 d~~~~~~~~----~~~d~vih~A~~~~~~~-----~~~-~~~~~~nv~~~~~ll~a~~~~~~~~~V~~SS~~vyg 131 (347)
T 4id9_A 67 DGQALSDAI----MGVSAVLHLGAFMSWAP-----ADR-DRMFAVNVEGTRRLLDAASAAGVRRFVFASSGEVYP 131 (347)
T ss_dssp CHHHHHHHH----TTCSEEEECCCCCCSSG-----GGH-HHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGTT
T ss_pred CHHHHHHHH----hCCCEEEECCcccCcch-----hhH-HHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHHhC
Confidence 344444443 27898887654332111 112 233334444 456788887754 4677777644443
No 178
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=27.65 E-value=3.5e+02 Score=26.17 Aligned_cols=126 Identities=17% Similarity=0.019 Sum_probs=59.9
Q ss_pred CcEEEEEecCcccHHHHHHHHHHcCcEEEEechh----HHHHHHCCCeeEEecccCCCCCCCCCcccccccccccccccC
Q 007518 75 NKQALISLSDKKDLASLGIGLQELGYTIVSTGGT----ATSLENAGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILAR 150 (600)
Q Consensus 75 i~rALISVsDK~glv~~Ak~L~~lGfeIiATgGT----Ak~L~e~GI~v~~VskiTGfPEildGRVKTLHPkIhGGILar 150 (600)
.+++||+...--=--.+++.|.+.|++++++.-. .+.+.+. ...+. +.-+.+|.. +-| +
T Consensus 27 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~------~~~~~---~~~~~~~~~-----~~~---D 89 (352)
T 1sb8_A 27 PKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEV------RSLVS---EKQWSNFKF-----IQG---D 89 (352)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHH------HHHSC---HHHHTTEEE-----EEC---C
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHH------hhhcc---cccCCceEE-----EEC---C
Confidence 3578887763211236778888889888876421 1222210 00000 000011111 111 1
Q ss_pred CCCHHhHHHHHHcCCCceeEEEEeccCcHHhhhcCCCCChhhhhhcccc-chHHHHHHHHHCC-CCEEEEeCCCCHH
Q 007518 151 RDQKHHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDI-GGPAMIRAAAKNH-KDVLVVVGSEDYP 225 (600)
Q Consensus 151 r~~~~h~~~l~~~~I~~IDlVVVNLYPFe~tv~~~~~~~~ee~IEnIDI-GGpsmiRAAAKN~-~~V~Vv~dP~DY~ 225 (600)
-.+++.++++-+ .+|.||.+.-+....... .+.++.++ +.+ |--.++++|.++- ++++.+++..-|.
T Consensus 90 l~d~~~~~~~~~----~~d~vih~A~~~~~~~~~---~~~~~~~~-~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~ 158 (352)
T 1sb8_A 90 IRNLDDCNNACA----GVDYVLHQAALGSVPRSI---NDPITSNA-TNIDGFLNMLIAARDAKVQSFTYAASSSTYG 158 (352)
T ss_dssp TTSHHHHHHHHT----TCSEEEECCSCCCHHHHH---HCHHHHHH-HHTHHHHHHHHHHHHTTCSEEEEEEEGGGGT
T ss_pred CCCHHHHHHHhc----CCCEEEECCcccCchhhh---hCHHHHHH-HHHHHHHHHHHHHHHcCCCEEEEeccHHhcC
Confidence 123444444432 689998887653211110 12334333 334 4457888887754 5666676655553
No 179
>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=27.60 E-value=2.4e+02 Score=27.61 Aligned_cols=33 Identities=27% Similarity=0.173 Sum_probs=22.9
Q ss_pred CCcEEEEEecCcccHHHHHHHHHHcCcEEEEec
Q 007518 74 ANKQALISLSDKKDLASLGIGLQELGYTIVSTG 106 (600)
Q Consensus 74 ~i~rALISVsDK~glv~~Ak~L~~lGfeIiATg 106 (600)
|++++||+...--=--.+++.|.+.|++++++.
T Consensus 23 M~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~ 55 (375)
T 1t2a_A 23 MRNVALITGITGQDGSYLAEFLLEKGYEVHGIV 55 (375)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred cCcEEEEECCCchHHHHHHHHHHHCCCEEEEEE
Confidence 337899987632212467889999999998864
No 180
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=27.59 E-value=82 Score=31.94 Aligned_cols=50 Identities=16% Similarity=0.247 Sum_probs=38.1
Q ss_pred CcEEEEEec----CcccHHHHHHHHHHcCcEE--EEechhHHHHHHCCCeeEEecc
Q 007518 75 NKQALISLS----DKKDLASLGIGLQELGYTI--VSTGGTATSLENAGVSVTKVEQ 124 (600)
Q Consensus 75 i~rALISVs----DK~glv~~Ak~L~~lGfeI--iATgGTAk~L~e~GI~v~~Vsk 124 (600)
++|+|+... +-.-++.+|+.|.+.|+++ ++++.-.+.+.+.|+++..+..
T Consensus 20 ~mrIl~~~~~~~GHv~p~l~la~~L~~~GheV~~~~~~~~~~~v~~~G~~~~~i~~ 75 (441)
T 2yjn_A 20 HMRVVFSSMASKSHLFGLVPLAWAFRAAGHEVRVVASPALTEDITAAGLTAVPVGT 75 (441)
T ss_dssp CCEEEEECCSCHHHHTTTHHHHHHHHHTTCEEEEEECGGGHHHHHTTTCCEEECSC
T ss_pred ccEEEEEcCCCcchHhHHHHHHHHHHHCCCeEEEEeCchhHHHHHhCCCceeecCC
Confidence 346766543 5667899999999999887 5566666778899999888764
No 181
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=27.57 E-value=1.7e+02 Score=29.52 Aligned_cols=32 Identities=13% Similarity=0.079 Sum_probs=25.2
Q ss_pred cEEEEEecCcccHHHHHHHHHHcCcEEEEech
Q 007518 76 KQALISLSDKKDLASLGIGLQELGYTIVSTGG 107 (600)
Q Consensus 76 ~rALISVsDK~glv~~Ak~L~~lGfeIiATgG 107 (600)
+++||+....-==..+|+.|.+.|++++.+.-
T Consensus 46 k~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r 77 (346)
T 3kvo_A 46 CTVFITGASRGIGKAIALKAAKDGANIVIAAK 77 (346)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEES
T ss_pred CEEEEeCCChHHHHHHHHHHHHCCCEEEEEEC
Confidence 67899987643336789999999999998753
No 182
>1vff_A Beta-glucosidase; glycosyl hydrolase, membrane-bound enzyme, thermostability, TIM barrel, alkylglucosides; 2.50A {Pyrococcus horikoshii} SCOP: c.1.8.4
Probab=27.50 E-value=22 Score=37.88 Aligned_cols=51 Identities=18% Similarity=0.193 Sum_probs=42.7
Q ss_pred EEeecccccCCccchHHHHHHCCCeEE--------ecCCCCCCc-------hHHHHHHHhcCcEEEec
Q 007518 541 ALASDAFFPFAWKDAVEEACENGIGVI--------AEPGGSIRD-------GDAIDCCNKYGVALLLT 593 (600)
Q Consensus 541 vlASDAFFPF~~~D~ve~Aa~aGi~aI--------IQPGGSiRD-------~evI~aa~e~giaMvfT 593 (600)
-.|+|-+-.+. +=|+.++++|++++ |+|-|..=| +++|+.|.++||..+.|
T Consensus 43 ~~a~d~Y~~~~--eDi~lm~~~G~~~~R~si~W~ri~P~~g~~n~~gl~~yd~lid~l~~~GI~pivt 108 (423)
T 1vff_A 43 GKACNHWELYR--DDIQLMTSLGYNAYRFSIEWSRLFPEENKFNEDAFMKYREIIDLLLTRGITPLVT 108 (423)
T ss_dssp CCTTCHHHHHH--HHHHHHHHHTCCEEEEECCHHHHCSBTTBCCHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred cccccchhccH--HHHHHHHHcCCCEEEeecCHHHhCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEE
Confidence 45889888888 99999999999998 788654444 45999999999998876
No 183
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=27.47 E-value=64 Score=31.81 Aligned_cols=47 Identities=17% Similarity=0.302 Sum_probs=34.4
Q ss_pred cEEEEEecCcccHHHHHHHHHHcCcEEEEec-----hhHHHHHHCCCeeEEe
Q 007518 76 KQALISLSDKKDLASLGIGLQELGYTIVSTG-----GTATSLENAGVSVTKV 122 (600)
Q Consensus 76 ~rALISVsDK~glv~~Ak~L~~lGfeIiATg-----GTAk~L~e~GI~v~~V 122 (600)
|.|||+-.-.-==..+|+.|.+.|..++.+. -|.+.+++.|-.+..+
T Consensus 10 KvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~g~~~~~~ 61 (247)
T 4hp8_A 10 RKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPDETLDIIAKDGGNASAL 61 (247)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEE
T ss_pred CEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhCCcEEEE
Confidence 4678877654333678999999999999874 4677788877765543
No 184
>1ng7_A Poliovirus 3A-N, genome polyprotein [core protein P3A]; helical hairpin, unfolded domain, symmetric dimer, viral protein; NMR {Human poliovirus 1} SCOP: a.178.1.1
Probab=27.35 E-value=16 Score=29.60 Aligned_cols=18 Identities=22% Similarity=0.492 Sum_probs=15.3
Q ss_pred CCCchHHHHHHHhcCcEE
Q 007518 573 SIRDGDAIDCCNKYGVAL 590 (600)
Q Consensus 573 SiRD~evI~aa~e~giaM 590 (600)
|++++|||+.|.+.|--+
T Consensus 28 svds~eV~~YC~~kGwIi 45 (60)
T 1ng7_A 28 AVDSQEVRDYCEKKGWIV 45 (60)
T ss_dssp HHCCHHHHHHHHHHTCCC
T ss_pred cCCCHHHHHHHHHCCcee
Confidence 578899999999998654
No 185
>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A
Probab=27.32 E-value=84 Score=29.48 Aligned_cols=117 Identities=13% Similarity=0.122 Sum_probs=61.0
Q ss_pred cEEEEEecCcccHHHHHHHHHHcCcEEEEechhHHHHHHCCCeeEEecccCCCCCCCCCcccccccccccccccCCCCHH
Q 007518 76 KQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLENAGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKH 155 (600)
Q Consensus 76 ~rALISVsDK~glv~~Ak~L~~lGfeIiATgGTAk~L~e~GI~v~~VskiTGfPEildGRVKTLHPkIhGGILarr~~~~ 155 (600)
+++||+-...-==..+|+.|.+.|++++.+.-... -+. .+. |+-.+=.+++
T Consensus 16 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~--------------------~~~----~~~-----~~~~D~~~~~ 66 (247)
T 1uzm_A 16 RSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSG--------------------APK----GLF-----GVEVDVTDSD 66 (247)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSC--------------------CCT----TSE-----EEECCTTCHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChH--------------------HHH----Hhc-----CeeccCCCHH
Confidence 57888876543335788999999999988753211 000 010 1333333444
Q ss_pred hHHHHHH---cCCCceeEEEEeccCcHH-hhhcCCCCChhhhhh--ccccchH-HHHHHHHH-----CCCCEEEEeCCCC
Q 007518 156 HMDALSE---HGIGTFDLVVVNLYPFYD-KVTSAGGIDFEDGIE--NIDIGGP-AMIRAAAK-----NHKDVLVVVGSED 223 (600)
Q Consensus 156 h~~~l~~---~~I~~IDlVVVNLYPFe~-tv~~~~~~~~ee~IE--nIDIGGp-smiRAAAK-----N~~~V~Vv~dP~D 223 (600)
.++++-+ ...++||+||.|-=.... ... ..+.++.-+ ++..-|+ -|+|++.+ +..+++.+++..-
T Consensus 67 ~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~---~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~ 143 (247)
T 1uzm_A 67 AVDRAFTAVEEHQGPVEVLVSNAGLSADAFLM---RMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSG 143 (247)
T ss_dssp HHHHHHHHHHHHHSSCSEEEEECSCCC--------CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCCCCCCChh---hCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEECCHhh
Confidence 4443322 123579999988632211 111 233333322 3445555 55677653 3567777777654
Q ss_pred H
Q 007518 224 Y 224 (600)
Q Consensus 224 Y 224 (600)
|
T Consensus 144 ~ 144 (247)
T 1uzm_A 144 L 144 (247)
T ss_dssp -
T ss_pred c
Confidence 4
No 186
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=27.22 E-value=1.2e+02 Score=31.82 Aligned_cols=95 Identities=16% Similarity=0.184 Sum_probs=50.9
Q ss_pred EEEEEec---CcccHHHHHHHHHHcCcEE--EEechhHHHHHHC----------CCeeEEecccCCCCCCCCCccc--cc
Q 007518 77 QALISLS---DKKDLASLGIGLQELGYTI--VSTGGTATSLENA----------GVSVTKVEQLTCFPEMLDGRVK--TL 139 (600)
Q Consensus 77 rALISVs---DK~glv~~Ak~L~~lGfeI--iATgGTAk~L~e~----------GI~v~~VskiTGfPEildGRVK--TL 139 (600)
-+++..- +=.-+++||+.|.+.|+++ +.|......+.+. |+.+..+.+ |+|+. ++... .-
T Consensus 11 vl~~p~p~~GHi~P~l~La~~L~~rG~~VT~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~l~~--~lp~~-~~~~~~~~~ 87 (482)
T 2pq6_A 11 VVMIPYPVQGHINPLFKLAKLLHLRGFHITFVNTEYNHKRLLKSRGPKAFDGFTDFNFESIPD--GLTPM-EGDGDVSQD 87 (482)
T ss_dssp EEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHC------------CEEEEEECC--CCC----------CC
T ss_pred EEEecCccchhHHHHHHHHHHHHhCCCeEEEEeCCchhhhhccccccccccCCCceEEEECCC--CCCCc-ccccCcchh
Confidence 3444433 4556899999999999664 6777766666442 888888875 77762 21111 00
Q ss_pred ccccccccccCCCCHHhHHHHH-HcC----CCceeEEEEecc
Q 007518 140 HPNIHGGILARRDQKHHMDALS-EHG----IGTFDLVVVNLY 176 (600)
Q Consensus 140 HPkIhGGILarr~~~~h~~~l~-~~~----I~~IDlVVVNLY 176 (600)
.+...-.+ .+..+..++++- ++. -.++|+||+..+
T Consensus 88 ~~~~~~~~--~~~~~~~l~~ll~~l~~~~~~~~~d~vI~D~~ 127 (482)
T 2pq6_A 88 VPTLCQSV--RKNFLKPYCELLTRLNHSTNVPPVTCLVSDCC 127 (482)
T ss_dssp HHHHHHHH--TTSSHHHHHHHHHHHHTCSSSCCCCEEEEETT
T ss_pred HHHHHHHH--HHHhhHHHHHHHHHHhhhccCCCceEEEECCc
Confidence 11111111 123344444433 221 257999999864
No 187
>3mc3_A DSRE/DSRF-like family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.49A {Sulfolobus solfataricus}
Probab=27.09 E-value=36 Score=30.01 Aligned_cols=56 Identities=18% Similarity=0.272 Sum_probs=43.8
Q ss_pred CHHhHHHHHHcCCCceeEEEEeccCcHHhh-hcCCCCChhhhhhccccchHHHHHHHHHCCCCEEE
Q 007518 153 QKHHMDALSEHGIGTFDLVVVNLYPFYDKV-TSAGGIDFEDGIENIDIGGPAMIRAAAKNHKDVLV 217 (600)
Q Consensus 153 ~~~h~~~l~~~~I~~IDlVVVNLYPFe~tv-~~~~~~~~ee~IEnIDIGGpsmiRAAAKN~~~V~V 217 (600)
..+-++.+.++| +.++||- ... ... +.+.+++|+.++|+|+.-+-..+.+.+.|+.
T Consensus 77 ~~~ll~~~~~~G---v~v~vC~-----~s~~~~r-Gi~~~dLi~gv~i~g~~~l~~~~~~ad~vl~ 133 (134)
T 3mc3_A 77 FIHFFDMAXENG---VXMYVCV-----QSLXDMC-HMXEDDVVEGIELVGGSTLIDLTLEADRTLF 133 (134)
T ss_dssp HHHHHHHHHHTT---CEEEEEH-----HHHHHTT-CCCGGGBCTTCEEECTHHHHHHHHHSSEEEE
T ss_pred HHHHHHHHHHcC---CcEEEcH-----hHHHHHh-CcChhhccCceEEECHHHHHHHHHhCCcEEe
Confidence 456677788888 4677774 455 444 8999999999999999999888888877753
No 188
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=26.97 E-value=1.5e+02 Score=28.44 Aligned_cols=33 Identities=18% Similarity=0.189 Sum_probs=25.8
Q ss_pred cEEEEEecCcccHHHHHHHHHHcCcEEEEechh
Q 007518 76 KQALISLSDKKDLASLGIGLQELGYTIVSTGGT 108 (600)
Q Consensus 76 ~rALISVsDK~glv~~Ak~L~~lGfeIiATgGT 108 (600)
+++||+-...-==..+|+.|.+.|++++.+.-.
T Consensus 33 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~ 65 (276)
T 3r1i_A 33 KRALITGASTGIGKKVALAYAEAGAQVAVAARH 65 (276)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 579999886433367899999999999987543
No 189
>2isb_A Fumarase, FUM-1; NP_069927.1, fumarase of FUM-1, structural genomics, PSI-2, structure initiative, joint center for structural genomics; HET: MSE; 1.66A {Archaeoglobus fulgidus} SCOP: c.8.9.1
Probab=26.77 E-value=52 Score=32.07 Aligned_cols=34 Identities=12% Similarity=0.089 Sum_probs=27.2
Q ss_pred HHHCCCeEEecCCCCCCchHHHHHHHhcCcEEEecC
Q 007518 559 ACENGIGVIAEPGGSIRDGDAIDCCNKYGVALLLTS 594 (600)
Q Consensus 559 Aa~aGi~aIIQPGGSiRD~evI~aa~e~giaMvfTg 594 (600)
..+.|++.+|--||- .++++++|.+|++=+.++|
T Consensus 107 l~~~G~~~mIGKG~r--~~~v~~a~k~~avYl~avG 140 (192)
T 2isb_A 107 LEKVECMGIIGKGGM--SEEVVEAMRGKAAYFAFTG 140 (192)
T ss_dssp HHHCSCEEEEEBSCC--CHHHHHHHTTTEEEEEECS
T ss_pred HHhCCcEEEEECCCC--CHHHHHHHHhCeEEEEcCc
Confidence 344699999999985 9999999999955555554
No 190
>3gtx_A Organophosphorus hydrolase; mutant, amidohydrolase, alpha-beta barrel; HET: KCX; 1.62A {Deinococcus radiodurans} PDB: 2zc1_A* 3gti_A* 3gu9_A* 3gtf_A* 3gth_A* 3gu2_A* 3gu1_A* 3fdk_A* 3htw_A*
Probab=26.59 E-value=54 Score=33.53 Aligned_cols=41 Identities=15% Similarity=0.185 Sum_probs=31.4
Q ss_pred hHHHHHHCCCeEEecCCC--CCCch-HHHHHHHhcCcEEEe-cCC
Q 007518 555 AVEEACENGIGVIAEPGG--SIRDG-DAIDCCNKYGVALLL-TSV 595 (600)
Q Consensus 555 ~ve~Aa~aGi~aIIQPGG--SiRD~-evI~aa~e~giaMvf-Tg~ 595 (600)
-++.|.++||+.||.|+. --||- .+.+.|.++|+.++. ||.
T Consensus 68 el~~a~~aGv~tiV~~~~~~~~r~~~~l~~la~~~g~~i~~~tG~ 112 (339)
T 3gtx_A 68 TARALLARGIQTVVDATPNGCGRNPAFLREVSEATGLQILCATGF 112 (339)
T ss_dssp HHHHHHHTTEEEEEECCCTTTTCCHHHHHHHHHHHCCEEECEECC
T ss_pred HHHHHHHhCCCeEEecCCCccCcCHHHHHHHHHHcCCcEEEEcCC
Confidence 456789999999999984 34887 678889999986543 553
No 191
>2hxv_A Diaminohydroxyphosphoribosylaminopyrimidine deami amino-6-(5-phosphoribosylamino)uracil...; oxidoreductase, structural genomics; HET: NDP; 1.80A {Thermotoga maritima} SCOP: c.71.1.2 c.97.1.2
Probab=26.39 E-value=87 Score=32.31 Aligned_cols=83 Identities=20% Similarity=0.378 Sum_probs=58.2
Q ss_pred EEEEEeCCeEEEecCCCCc-HHHHHHHHHHHc---CCccCceEEeecccccC------CccchHHHHHHCCCeEEecCCC
Q 007518 503 AIVIAKNNCMLGMGSGQPN-RRESLRIAMKKA---GDEVKGAALASDAFFPF------AWKDAVEEACENGIGVIAEPGG 572 (600)
Q Consensus 503 AIV~ak~~~tvGiGaGQ~s-RVds~~iA~~kA---~~~~~GavlASDAFFPF------~~~D~ve~Aa~aGi~aIIQPGG 572 (600)
.-|+++||+.||.|--+.. ...|-..|+.+| +.+++|+.|-.= ..|= + =|.....++||+.|+=-
T Consensus 39 Gaviv~~g~ii~~g~n~~~~~~HAE~~Ai~~a~~~~~~~~g~tlYvT-lEPC~h~g~t~--~C~~ai~~agi~rVv~~-- 113 (360)
T 2hxv_A 39 GAVVVKDGRIIAEGFHPYFGGPHAERMAIESARKKGEDLRGATLIVT-LEPCDHHGKTP--PCTDLIIESGIKTVVIG-- 113 (360)
T ss_dssp EEEEEETTEEEEEEECCSTTSCCHHHHHHHHHHHTTCCCTTCEEEEE-ECCCCSCSSSC--CHHHHHHHHTCCEEEEE--
T ss_pred EEEEEECCEEEEEEeCCCCCCcCHHHHHHHHHHhcCCCcCCcEEEEe-cCcccccCCCH--HHHHHHHHhCCCEEEEE--
Confidence 4466689999999875543 446667788888 888889887653 4576 4 68999999999988741
Q ss_pred CCCch-----HHHHHHHhcCcEEE
Q 007518 573 SIRDG-----DAIDCCNKYGVALL 591 (600)
Q Consensus 573 SiRD~-----evI~aa~e~giaMv 591 (600)
. .|. .-++.-.++||.+.
T Consensus 114 ~-~d~~~~~g~g~~~l~~~gi~v~ 136 (360)
T 2hxv_A 114 T-RDPNPVSGNGVEKFRNHGIEVI 136 (360)
T ss_dssp E-CCCCGGGCCHHHHHHTTTCEEE
T ss_pred e-cCchhhhhhHHHHHHhCCcEEE
Confidence 1 121 13566677888764
No 192
>3ipw_A Hydrolase TATD family protein; niaid, ssgcid, seattle structural genomics center for infect disease, dysentery, liver abcess; 1.95A {Entamoeba histolytica hm-1}
Probab=26.32 E-value=35 Score=35.08 Aligned_cols=34 Identities=32% Similarity=0.432 Sum_probs=31.1
Q ss_pred chHHHHHHCCCeEEecCCCCCCch-HHHHHHHhcC
Q 007518 554 DAVEEACENGIGVIAEPGGSIRDG-DAIDCCNKYG 587 (600)
Q Consensus 554 D~ve~Aa~aGi~aIIQPGGSiRD~-evI~aa~e~g 587 (600)
+.|++|.++||..||.||.+..|- ++++.|+++.
T Consensus 56 ~vl~rA~~aGV~~ii~~g~~~~~~~~~~~La~~~~ 90 (325)
T 3ipw_A 56 VVLQRAERNGLSHIIITSGCLNDFKKAIEIINKYQ 90 (325)
T ss_dssp HHHHHHHHTTEEEEEECCCSHHHHHHHHHHHHHHG
T ss_pred HHHHHHHHcCCcEEEEccCCHHHHHHHHHHHHHCC
Confidence 588999999999999999999887 7899999986
No 193
>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}
Probab=26.22 E-value=1.4e+02 Score=27.85 Aligned_cols=32 Identities=13% Similarity=0.084 Sum_probs=23.9
Q ss_pred cEEEEEecCcccHHHHHHHHHHcCcEEEEech
Q 007518 76 KQALISLSDKKDLASLGIGLQELGYTIVSTGG 107 (600)
Q Consensus 76 ~rALISVsDK~glv~~Ak~L~~lGfeIiATgG 107 (600)
+++||+-...-=-..+++.|.+.|++++.+.-
T Consensus 8 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r 39 (250)
T 2fwm_X 8 KNVWVTGAGKGIGYATALAFVEAGAKVTGFDQ 39 (250)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence 57888877533235788999999999988753
No 194
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=26.16 E-value=1.6e+02 Score=27.38 Aligned_cols=31 Identities=26% Similarity=0.323 Sum_probs=23.2
Q ss_pred cEEEEEecCcccHHHHHHHHHHcCcEEEEec
Q 007518 76 KQALISLSDKKDLASLGIGLQELGYTIVSTG 106 (600)
Q Consensus 76 ~rALISVsDK~glv~~Ak~L~~lGfeIiATg 106 (600)
|++||+-...-==..+|+.|.+.|++++.+.
T Consensus 5 k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~ 35 (246)
T 3osu_A 5 KSALVTGASRGIGRSIALQLAEEGYNVAVNY 35 (246)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEe
Confidence 5688877654323678899999999998764
No 195
>3ipc_A ABC transporter, substrate binding protein (amino; venus flytrap domain, transport protein; 1.30A {Agrobacterium tumefaciens} PDB: 3ip5_A 3ip6_A 3ip7_A 3ip9_A 3ipa_A
Probab=25.86 E-value=41 Score=32.46 Aligned_cols=72 Identities=14% Similarity=0.144 Sum_probs=47.4
Q ss_pred HHHHHHHHHHcCCc--cCc----eEEeecccccCCccchHHHHHHCCCeEEecCCCCCCchHHHHHHHhcCcEEEecC
Q 007518 523 RESLRIAMKKAGDE--VKG----AALASDAFFPFAWKDAVEEACENGIGVIAEPGGSIRDGDAIDCCNKYGVALLLTS 594 (600)
Q Consensus 523 Vds~~iA~~kA~~~--~~G----avlASDAFFPF~~~D~ve~Aa~aGi~aIIQPGGSiRD~evI~aa~e~giaMvfTg 594 (600)
..+++.|++..+.. +.| .++..|..=|-..-..++.+.+.||.+||-|.+|--...+.+.|++++|+||..+
T Consensus 23 ~~g~~~a~~~iN~~ggi~G~~~~l~~~d~~~~~~~~~~~~~~l~~~~v~~iig~~~s~~~~~~~~~~~~~~ip~v~~~ 100 (356)
T 3ipc_A 23 QKGAEQAAKDINAAGGINGEQIKIVLGDDVSDPKQGISVANKFVADGVKFVVGHANSGVSIPASEVYAENGILEITPA 100 (356)
T ss_dssp HHHHHHHHHHHHHTTCBTTBCEEEEEEECTTCHHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHHTTTCEEEESS
T ss_pred HHHHHHHHHHHHhcCCCCCeEEEEEEecCCCCHHHHHHHHHHHHHCCCcEEEcCCCcHHHHHHHHHHHhCCCeEEecC
Confidence 35667777764321 112 3333334333322245666777899999999998777788899999999999743
No 196
>3td9_A Branched chain amino acid ABC transporter, peripl amino acid-binding protein; leucine binding, structural genomics; HET: MSE PHE; 1.90A {Thermotoga maritima}
Probab=25.85 E-value=46 Score=32.30 Aligned_cols=71 Identities=15% Similarity=0.088 Sum_probs=45.7
Q ss_pred HHHHHHHHHcCCccCc----eEEeecccccCCccchHHHHHHC-CCeEEecCCCCCCchHHHHHHHhcCcEEEecCC
Q 007518 524 ESLRIAMKKAGDEVKG----AALASDAFFPFAWKDAVEEACEN-GIGVIAEPGGSIRDGDAIDCCNKYGVALLLTSV 595 (600)
Q Consensus 524 ds~~iA~~kA~~~~~G----avlASDAFFPF~~~D~ve~Aa~a-Gi~aIIQPGGSiRD~evI~aa~e~giaMvfTg~ 595 (600)
.++++|++..+. ..| .++..|..=|-..-..++.+.+. +|.+||-|.+|--...+.+.++++||+||..+.
T Consensus 38 ~g~~~a~~~in~-i~G~~i~l~~~D~~~~~~~~~~~~~~l~~~~~v~~iiG~~~s~~~~~~~~~~~~~~iP~i~~~~ 113 (366)
T 3td9_A 38 EGIQIAHEEKPT-VLGEEVELVLLDTRSEKTEAANAAARAIDKEKVLAIIGEVASAHSLAIAPIAEENKVPMVTPAS 113 (366)
T ss_dssp HHHHHHHHHCCE-ETTEEEEEEEEECTTCHHHHHHHHHHHHHTSCCSEEEECSSHHHHHHHHHHHHHTTCCEEESSC
T ss_pred HHHHHHHHHhhh-cCCeEEEEEEecCCCCHHHHHHHHHHHhccCCeEEEEccCCchhHHHHHHHHHhCCCeEEecCC
Confidence 456666666653 222 33333333332222344455555 599999999887777889999999999998753
No 197
>3kto_A Response regulator receiver protein; PSI-II,structural genomics, protein structure initiative; 1.98A {Pseudoalteromonas atlantica T6C} SCOP: c.23.1.0
Probab=25.82 E-value=2.7e+02 Score=22.66 Aligned_cols=94 Identities=14% Similarity=0.093 Sum_probs=58.1
Q ss_pred cEEEEEecCcccHHHHHHHHHHcCcEEEEechhHHHHHHCCCeeEEecccCCCCCCCCCcccccccccccccccCCCCHH
Q 007518 76 KQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLENAGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKH 155 (600)
Q Consensus 76 ~rALISVsDK~glv~~Ak~L~~lGfeIiATgGTAk~L~e~GI~v~~VskiTGfPEildGRVKTLHPkIhGGILarr~~~~ 155 (600)
.++||--.|..-...+.+.|.+.||++.......+.|+.
T Consensus 7 ~~ilivdd~~~~~~~l~~~L~~~g~~v~~~~~~~~a~~~----------------------------------------- 45 (136)
T 3kto_A 7 PIIYLVDHQKDARAALSKLLSPLDVTIQCFASAESFMRQ----------------------------------------- 45 (136)
T ss_dssp CEEEEECSCHHHHHHHHHHHTTSSSEEEEESSHHHHTTS-----------------------------------------
T ss_pred CeEEEEcCCHHHHHHHHHHHHHCCcEEEEeCCHHHHHHH-----------------------------------------
Confidence 466665556666666677777788888755432222221
Q ss_pred hHHHHHHcCCCceeEEEEeccCcHHhhhcCCCCChhhhhhccccchHHHHHHHHHCC--CCEEEEeCCCCHHHHHHHHhC
Q 007518 156 HMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGPAMIRAAAKNH--KDVLVVVGSEDYPALLEFLKG 233 (600)
Q Consensus 156 h~~~l~~~~I~~IDlVVVNLYPFe~tv~~~~~~~~ee~IEnIDIGGpsmiRAAAKN~--~~V~Vv~dP~DY~~vl~eL~~ 233 (600)
..-.++|+|++++.--. + ...|..++|.--+++ -.|.+++...+.+...+.++.
T Consensus 46 -------l~~~~~dlvi~D~~l~~-------~----------~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~ 101 (136)
T 3kto_A 46 -------QISDDAIGMIIEAHLED-------K----------KDSGIELLETLVKRGFHLPTIVMASSSDIPTAVRAMRA 101 (136)
T ss_dssp -------CCCTTEEEEEEETTGGG-------B----------TTHHHHHHHHHHHTTCCCCEEEEESSCCHHHHHHHHHT
T ss_pred -------HhccCCCEEEEeCcCCC-------C----------CccHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHc
Confidence 01135899999874210 0 033566666666654 358888999998888888875
Q ss_pred C
Q 007518 234 N 234 (600)
Q Consensus 234 G 234 (600)
|
T Consensus 102 g 102 (136)
T 3kto_A 102 S 102 (136)
T ss_dssp T
T ss_pred C
Confidence 4
No 198
>2vc7_A Aryldialkylphosphatase; phosphotriesterase, promiscuous activities, enzyme evolution, hyperthermophilic, lactonase, hydrolase; HET: KCX GOL HT5; 2.05A {Sulfolobus solfataricus} PDB: 2vc5_A*
Probab=25.79 E-value=72 Score=30.81 Aligned_cols=38 Identities=24% Similarity=0.236 Sum_probs=28.0
Q ss_pred HHHHHHCCCeEEecCCCC--CCch-HHHHHHHhcCcEEEec
Q 007518 556 VEEACENGIGVIAEPGGS--IRDG-DAIDCCNKYGVALLLT 593 (600)
Q Consensus 556 ve~Aa~aGi~aIIQPGGS--iRD~-evI~aa~e~giaMvfT 593 (600)
++.+.++||+.||-+|-+ -+|. .+.+.++++|+.++.+
T Consensus 53 l~~~~~~Gv~~iv~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 93 (314)
T 2vc7_A 53 VKRAMQFGVKTIVDPTVMGLGRDIRFMEKVVKATGINLVAG 93 (314)
T ss_dssp HHHHHHTTCCEEEECCCBTTTCCHHHHHHHHHHHCCEEEEC
T ss_pred HHHHHHcCCCEEEecCCCCCCcCHHHHHHHHHHcCCeEEEE
Confidence 367889999999999855 3444 5678889999765543
No 199
>3vup_A Beta-1,4-mannanase; TIM barrel, digestive fluid, HYD; 1.05A {Aplysia kurodai}
Probab=25.75 E-value=46 Score=31.13 Aligned_cols=17 Identities=24% Similarity=0.491 Sum_probs=14.8
Q ss_pred hHHHHHHHhcCcEEEec
Q 007518 577 GDAIDCCNKYGVALLLT 593 (600)
Q Consensus 577 ~evI~aa~e~giaMvfT 593 (600)
+++++.|+++||-++++
T Consensus 93 d~~~~~a~~~Gi~vil~ 109 (351)
T 3vup_A 93 KDLLDTAKKYNILVFPC 109 (351)
T ss_dssp HHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHCCCeEEEE
Confidence 78999999999988754
No 200
>3hut_A Putative branched-chain amino acid ABC transporter; extracellular ligand-binding receptor,transport protein; 1.93A {Rhodospirillum rubrum atcc 11170}
Probab=25.58 E-value=29 Score=33.58 Aligned_cols=72 Identities=13% Similarity=0.001 Sum_probs=46.8
Q ss_pred HHHHHHHHHHcCCc--cC----ceEEeecccccCCccchHHHHH-HCCCeEEecCCCCCCchHHHHHHHhcCcEEEecC
Q 007518 523 RESLRIAMKKAGDE--VK----GAALASDAFFPFAWKDAVEEAC-ENGIGVIAEPGGSIRDGDAIDCCNKYGVALLLTS 594 (600)
Q Consensus 523 Vds~~iA~~kA~~~--~~----GavlASDAFFPF~~~D~ve~Aa-~aGi~aIIQPGGSiRD~evI~aa~e~giaMvfTg 594 (600)
..+++.|+++.+++ +. ..++..|..=|-..-..++.+. +.+|.+||-|.+|--...+.+.+++++|+||..+
T Consensus 25 ~~g~~~a~~~~n~~ggi~G~~~~l~~~d~~~~~~~~~~~~~~l~~~~~v~~iig~~~s~~~~~~~~~~~~~~iP~v~~~ 103 (358)
T 3hut_A 25 QEAARLQLDRFNAAGGVGGRPVDILYADSRDDADQARTIARAFVDDPRVVGVLGDFSSTVSMAAGSIYGKEGMPQLSPT 103 (358)
T ss_dssp HHHHHHHHHHHHHTTTBTTBCEEEEEEECTTCHHHHHHHHHHHHHCTTEEEEEECSSHHHHHHHHHHHHHHTCCEEESS
T ss_pred HHHHHHHHHHHHhhCCCCCeEEEEEEecCCCCHHHHHHHHHHHhccCCcEEEEcCCCcHHHHHHHHHHHHCCCcEEecC
Confidence 45667777766421 11 1233333333322223455666 7899999998888666788899999999999864
No 201
>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2
Probab=25.48 E-value=1.1e+02 Score=28.67 Aligned_cols=104 Identities=11% Similarity=0.068 Sum_probs=57.2
Q ss_pred CcEEEEEecCcccHHHHHHHHHHcCcEEEEechhHHHHHHCCCeeEEecccCCCCCCCCCcccccccccccccccCCCCH
Q 007518 75 NKQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLENAGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQK 154 (600)
Q Consensus 75 i~rALISVsDK~glv~~Ak~L~~lGfeIiATgGTAk~L~e~GI~v~~VskiTGfPEildGRVKTLHPkIhGGILarr~~~ 154 (600)
.+++||+...--=--.+++.|.+.|++++++.-. . | +-.++
T Consensus 12 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~------------------------~------------~---Dl~d~ 52 (292)
T 1vl0_A 12 HMKILITGANGQLGREIQKQLKGKNVEVIPTDVQ------------------------D------------L---DITNV 52 (292)
T ss_dssp CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT------------------------T------------C---CTTCH
T ss_pred cceEEEECCCChHHHHHHHHHHhCCCeEEeccCc------------------------c------------C---CCCCH
Confidence 4578888873221246778898999999887542 0 1 11234
Q ss_pred HhHHH-HHHcCCCceeEEEEeccCcHHhhhcCCCCChhhhhhcccc-chHHHHHHHHHCCCCEEEEeCCCCH
Q 007518 155 HHMDA-LSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDI-GGPAMIRAAAKNHKDVLVVVGSEDY 224 (600)
Q Consensus 155 ~h~~~-l~~~~I~~IDlVVVNLYPFe~tv~~~~~~~~ee~IEnIDI-GGpsmiRAAAKN~~~V~Vv~dP~DY 224 (600)
+.+++ +++. .+|.||.+--+....... .+.++.++ +.+ |--.++++|.++-.+++.+++..-|
T Consensus 53 ~~~~~~~~~~---~~d~vih~A~~~~~~~~~---~~~~~~~~-~nv~~~~~l~~a~~~~~~~iv~~SS~~v~ 117 (292)
T 1vl0_A 53 LAVNKFFNEK---KPNVVINCAAHTAVDKCE---EQYDLAYK-INAIGPKNLAAAAYSVGAEIVQISTDYVF 117 (292)
T ss_dssp HHHHHHHHHH---CCSEEEECCCCCCHHHHH---HCHHHHHH-HHTHHHHHHHHHHHHHTCEEEEEEEGGGS
T ss_pred HHHHHHHHhc---CCCEEEECCccCCHHHHh---cCHHHHHH-HHHHHHHHHHHHHHHcCCeEEEechHHeE
Confidence 44443 3333 579988776543211111 12344443 344 4457888888765566666654333
No 202
>2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A*
Probab=25.20 E-value=1.4e+02 Score=27.22 Aligned_cols=33 Identities=21% Similarity=0.331 Sum_probs=26.2
Q ss_pred ccHHHHHHHHHHcCcEE-EEechh-------------------HHHHHHCCCe
Q 007518 86 KDLASLGIGLQELGYTI-VSTGGT-------------------ATSLENAGVS 118 (600)
Q Consensus 86 ~glv~~Ak~L~~lGfeI-iATgGT-------------------Ak~L~e~GI~ 118 (600)
.++.++.+.|.+.|+.+ +.|+++ .+.|++.|+.
T Consensus 53 pg~~e~L~~L~~~G~~~~ivTn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~ 105 (211)
T 2gmw_A 53 DGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVD 105 (211)
T ss_dssp TTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCC
T ss_pred cCHHHHHHHHHHCCCeEEEEECcCCcCCCccCHHHHHHHHHHHHHHHHHcCCc
Confidence 68999999999999986 466665 3467888886
No 203
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=25.18 E-value=1.4e+02 Score=29.17 Aligned_cols=128 Identities=13% Similarity=0.160 Sum_probs=65.6
Q ss_pred cEEEEEecCcccHHHHHHHHHHcCcEEEEechhHHHHHHCCCeeEEecccCCCCCCCCCcccccccccccccccCCCCHH
Q 007518 76 KQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLENAGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKH 155 (600)
Q Consensus 76 ~rALISVsDK~glv~~Ak~L~~lGfeIiATgGTAk~L~e~GI~v~~VskiTGfPEildGRVKTLHPkIhGGILarr~~~~ 155 (600)
|++||+....-==..+|+.|.+.|++++.++-....+++. ..++... -.+++.++. +=+ .+++
T Consensus 42 k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~------~~~l~~~---~~~~~~~~~-----~Dv---~d~~ 104 (293)
T 3rih_A 42 RSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSV------TAELGEL---GAGNVIGVR-----LDV---SDPG 104 (293)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHH------HHHHTTS---SSSCEEEEE-----CCT---TCHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHH------HHHHHhh---CCCcEEEEE-----EeC---CCHH
Confidence 5789988754333578999999999999886543333220 0111100 013333322 112 2344
Q ss_pred hHHHHHH---cCCCceeEEEEeccCcHHhhhcCCCCChhhhhh--ccccchH-HHHHHHH-----HCCCCEEEEeCCC
Q 007518 156 HMDALSE---HGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIE--NIDIGGP-AMIRAAA-----KNHKDVLVVVGSE 222 (600)
Q Consensus 156 h~~~l~~---~~I~~IDlVVVNLYPFe~tv~~~~~~~~ee~IE--nIDIGGp-smiRAAA-----KN~~~V~Vv~dP~ 222 (600)
.++++-+ ...++||+||.|-=.+...--. ..+.++.-+ ++..-|+ -++|++. ++..+++.+++-.
T Consensus 105 ~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~--~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iV~isS~~ 180 (293)
T 3rih_A 105 SCADAARTVVDAFGALDVVCANAGIFPEARLD--TMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSIT 180 (293)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCCCCCCCCTT--TCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHSSCEEEEECCSB
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcc--cCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEeChh
Confidence 4333221 1235899999885322111001 234444333 3445555 5677773 4566777777654
No 204
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=25.09 E-value=76 Score=29.43 Aligned_cols=38 Identities=26% Similarity=0.229 Sum_probs=28.0
Q ss_pred cEEEEEecCcccHHHHHHHHHHcCcEEEEechhHHHHH
Q 007518 76 KQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLE 113 (600)
Q Consensus 76 ~rALISVsDK~glv~~Ak~L~~lGfeIiATgGTAk~L~ 113 (600)
+++||+....-=-..+|+.|.+.|++++.+.-....++
T Consensus 6 k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~ 43 (247)
T 3lyl_A 6 KVALVTGASRGIGFEVAHALASKGATVVGTATSQASAE 43 (247)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 57888877543235789999999999999876554443
No 205
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=25.06 E-value=52 Score=32.88 Aligned_cols=38 Identities=32% Similarity=0.503 Sum_probs=25.2
Q ss_pred hHHHHHHCCCeEEecCCCCCCc-hHHHHHHHhcCcEEEe
Q 007518 555 AVEEACENGIGVIAEPGGSIRD-GDAIDCCNKYGVALLL 592 (600)
Q Consensus 555 ~ve~Aa~aGi~aIIQPGGSiRD-~evI~aa~e~giaMvf 592 (600)
=++.|+++||..+|=|.=-..+ ++..++|++||+..+|
T Consensus 108 F~~~~~~aGvdG~IipDLP~eE~~~~~~~~~~~Gl~~I~ 146 (252)
T 3tha_A 108 FVKKAKSLGICALIVPELSFEESDDLIKECERYNIALIT 146 (252)
T ss_dssp HHHHHHHTTEEEEECTTCCGGGCHHHHHHHHHTTCEECE
T ss_pred HHHHHHHcCCCEEEeCCCCHHHHHHHHHHHHHcCCeEEE
Confidence 3456777777777777655433 3667777777777666
No 206
>2j78_A Beta-glucosidase A; family 1, hydrolase, inhibitor, glycosidase, polysaccharide degradation, transition state mimic, carbohydrate metabolism; HET: GOX; 1.65A {Thermotoga maritima} SCOP: c.1.8.4 PDB: 1oif_A* 1oim_A* 1oin_A* 1od0_A* 1w3j_A* 1uz1_A* 2cbv_A* 2ces_A* 2cet_A* 2j75_A* 2j77_A* 2cbu_A* 2j79_A* 2j7b_A* 2j7c_A* 2j7d_A* 2j7e_A* 2j7f_A* 2j7g_A* 2j7h_A* ...
Probab=25.01 E-value=28 Score=37.60 Aligned_cols=50 Identities=20% Similarity=0.345 Sum_probs=43.0
Q ss_pred EeecccccCCccchHHHHHHCCCeEE--------ecCC--CCCCc------hHHHHHHHhcCcEEEec
Q 007518 542 LASDAFFPFAWKDAVEEACENGIGVI--------AEPG--GSIRD------GDAIDCCNKYGVALLLT 593 (600)
Q Consensus 542 lASDAFFPF~~~D~ve~Aa~aGi~aI--------IQPG--GSiRD------~evI~aa~e~giaMvfT 593 (600)
.|+|-+..+. +=|+.++++|++++ |+|- |.++. +++|+.|.++||..+.|
T Consensus 75 ~a~D~Y~~~~--eDi~lm~~~G~~~~R~si~W~Ri~P~G~g~~n~~gl~~yd~lid~l~~~GI~pivt 140 (468)
T 2j78_A 75 VACDHYNRWK--EDIEIIEKLGVKAYRFSISWPRILPEGTGRVNQKGLDFYNRIIDTLLEKGITPFVT 140 (468)
T ss_dssp STTCHHHHHH--HHHHHHHHTTCCEEEEECCHHHHSTTSSSCCCHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred ccccccccCH--HHHHHHHHcCCCEEEeccCHHHhCCCCCCCcCHHHHHHHHHHHHHHHhcCCEEEEE
Confidence 3889888888 99999999999998 8997 45554 57899999999988876
No 207
>1ug6_A Beta-glycosidase; glucosidase, atomic resolution, riken structural genomics/PR initiative, RSGI, structural genomics, hydrolase; 0.99A {Thermus thermophilus} SCOP: c.1.8.4 PDB: 1np2_A
Probab=24.90 E-value=28 Score=37.13 Aligned_cols=50 Identities=20% Similarity=0.283 Sum_probs=42.5
Q ss_pred EeecccccCCccchHHHHHHCCCeEE--------ecCCC--CCCc------hHHHHHHHhcCcEEEec
Q 007518 542 LASDAFFPFAWKDAVEEACENGIGVI--------AEPGG--SIRD------GDAIDCCNKYGVALLLT 593 (600)
Q Consensus 542 lASDAFFPF~~~D~ve~Aa~aGi~aI--------IQPGG--SiRD------~evI~aa~e~giaMvfT 593 (600)
.|+|-+.+++ +=|+.++++|++++ |+|-| .++. +++|+.|.++||..+.|
T Consensus 51 ~a~D~Y~~~~--eDi~lm~~~G~~~~R~si~W~Ri~P~g~g~~n~~gl~~y~~~id~l~~~GI~p~vt 116 (431)
T 1ug6_A 51 PACDHYRRYE--EDIALMQSLGVRAYRFSVAWPRILPEGRGRINPKGLAFYDRLVDRLLASGITPFLT 116 (431)
T ss_dssp STTCHHHHHH--HHHHHHHHHTCCEEEEECCHHHHSTTSSSCCCHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred ccccchhhhH--HHHHHHHHcCCCEEEcccCHHHcccCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEE
Confidence 5899998888 99999999999998 89975 4431 57899999999988776
No 208
>1wcw_A Uroporphyrinogen III synthase; congenital erythropoietic porph structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.30A {Thermus thermophilus} PDB: 1wd7_A 1wcx_A
Probab=24.85 E-value=1.4e+02 Score=28.25 Aligned_cols=120 Identities=19% Similarity=0.138 Sum_probs=65.4
Q ss_pred cccHHHHHHHHHHcC---------cEEEEec-hhHHHHHHCCCeeEEecccCCCCCCCCCcccccccccccc--cccCC-
Q 007518 85 KKDLASLGIGLQELG---------YTIVSTG-GTATSLENAGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGG--ILARR- 151 (600)
Q Consensus 85 K~glv~~Ak~L~~lG---------feIiATg-GTAk~L~e~GI~v~~VskiTGfPEildGRVKTLHPkIhGG--ILarr- 151 (600)
+.++.-|.+.|.+.| ..+++-| +|++.|++.|+.+..+.+.++ +|=++.|.+ |. +|.-|
T Consensus 68 ~~aV~~~~~~l~~~~~~~~~~l~~~~i~avG~~Ta~~l~~~G~~~~~~p~~~~-----e~L~~~l~~---g~~~vL~~r~ 139 (261)
T 1wcw_A 68 GVGVRDLLEAGKALGLDLEGPLAKAFRLARGAKAARALKEAGLPPHAVGDGTS-----KSLLPLLPQ---GRGVAALQLY 139 (261)
T ss_dssp HHHHHHHHHHHHHTTCCCHHHHHHSEEEESSHHHHHHHHHTTCCCSEECSSSH-----HHHGGGSCC---CCEEEEEECC
T ss_pred HHHHHHHHHHHHHhCchHHHHhcCCeEEEECHHHHHHHHHcCCCCCcccCccH-----HHHHHHHHc---CCceEEEEcc
Confidence 456666666665543 5788875 899999999998765553221 111222222 21 22222
Q ss_pred --CCHHhHHHHHHcCCCceeEEEEeccCcHHhhhcCCCCChhhhhhccccchHHHHHHHHHCCCCEEEEeCCCCHHHHHH
Q 007518 152 --DQKHHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGPAMIRAAAKNHKDVLVVVGSEDYPALLE 229 (600)
Q Consensus 152 --~~~~h~~~l~~~~I~~IDlVVVNLYPFe~tv~~~~~~~~ee~IEnIDIGGpsmiRAAAKN~~~V~Vv~dP~DY~~vl~ 229 (600)
..+.-.+.|+++|+ ++..+-+|- ++.. ....++++ +.-...--+++++++|+--..+++
T Consensus 140 ~~~~~~L~~~L~~~G~---~v~~~~~Y~---~~~~--~~~~~~~~-----------~~l~~~~~d~v~ftS~~~v~~~~~ 200 (261)
T 1wcw_A 140 GKPLPLLENALAERGY---RVLPLMPYR---HLPD--PEGILRLE-----------EALLRGEVDALAFVAAIQVEFLFE 200 (261)
T ss_dssp SSCCHHHHHHHHHTTE---EEEEECSEE---EEEC--HHHHHHHH-----------HHHHHTCCSEEEECSHHHHHHHHH
T ss_pred CcccHHHHHHHHHCCC---EEEEEeeEE---EecC--CccHHHHH-----------HHHHcCCCCEEEEECHHHHHHHHH
Confidence 23444567888885 455555552 2211 00112222 222233457888899987777766
Q ss_pred HH
Q 007518 230 FL 231 (600)
Q Consensus 230 eL 231 (600)
.+
T Consensus 201 ~~ 202 (261)
T 1wcw_A 201 GA 202 (261)
T ss_dssp HC
T ss_pred HH
Confidence 55
No 209
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=24.81 E-value=64 Score=30.39 Aligned_cols=32 Identities=13% Similarity=0.202 Sum_probs=25.5
Q ss_pred cEEEEEecCc-ccH-HHHHHHHHHcCcEEEEech
Q 007518 76 KQALISLSDK-KDL-ASLGIGLQELGYTIVSTGG 107 (600)
Q Consensus 76 ~rALISVsDK-~gl-v~~Ak~L~~lGfeIiATgG 107 (600)
+++||+...- +|| ..+|+.|.+.|++++.+.-
T Consensus 8 k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r 41 (266)
T 3oig_A 8 RNIVVMGVANKRSIAWGIARSLHEAGARLIFTYA 41 (266)
T ss_dssp CEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecC
Confidence 5799998764 455 5799999999999998843
No 210
>2i5g_A Amidohydrolase; NYSGXRC, NYSGXRC-9311A, PSI2, structural genomics, protein structure initiative; 2.60A {Pseudomonas aeruginosa}
Probab=24.78 E-value=2.5e+02 Score=28.65 Aligned_cols=92 Identities=20% Similarity=0.223 Sum_probs=58.8
Q ss_pred CCCCHHhHHHHHHcCCCceeEEEEeccCcHHhhhcCCCCChhhhhhccc----cchH--------------HHHHHHHH-
Q 007518 150 RRDQKHHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENID----IGGP--------------AMIRAAAK- 210 (600)
Q Consensus 150 rr~~~~h~~~l~~~~I~~IDlVVVNLYPFe~tv~~~~~~~~ee~IEnID----IGGp--------------smiRAAAK- 210 (600)
|.-.++.++++.+.| =+|=+|+||+--+-.. +.++++++++|| ++|+ .-...=..
T Consensus 191 RNl~De~irala~~G----Gvigv~~~~~fl~~~~--~~t~~~~~~hi~~i~~~~G~dhVgiGsDf~~~~~~~~~~~~~~ 264 (325)
T 2i5g_A 191 RNKSDEELKFIADHG----GFVGVTMFAPFLKKGI--DSTIDDYAEAIEYVMNIVGEDAIGIGTDFTQGHGHDFFEWLTH 264 (325)
T ss_dssp TSBCHHHHHHHHHTT----CEEEECCCGGGSSSGG--GCBHHHHHHHHHHHHHHHCTTSEEECCCBCTTCCHHHHHHHHB
T ss_pred CCCCHHHHHHHHHcC----CeEEEeecchhcCCCC--CCCHHHHHHHHHHHHHhcCCceEEECCcCcccccccchhhhcc
Confidence 445678889999887 3677899997543222 578999999965 3332 10000000
Q ss_pred -C--------CC-CEEE--EeCCCCHHHHHHHHhCCCCCHHHHHHHHHH
Q 007518 211 -N--------HK-DVLV--VVGSEDYPALLEFLKGNQDDQQFRRKLAWK 247 (600)
Q Consensus 211 -N--------~~-~V~V--v~dP~DY~~vl~eL~~G~~s~~~R~~LA~k 247 (600)
+ |- ...+ +.|+++|+.++++|..-..|.+..++++..
T Consensus 265 ~dg~~~~~~~~G~~~~~~gl~~~~~~~~l~~~L~~~G~se~~i~ki~g~ 313 (325)
T 2i5g_A 265 DKGYARRLTNFGKIVNPLGIRTVGEFPNLTETLLKRGMPERVVRKVMGE 313 (325)
T ss_dssp GGGTSSBCCCCCSCCCCBTCSSGGGTHHHHHHHHHTTCCHHHHHHHHTH
T ss_pred cccccccccccCCCCCcccCCCHHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 0 00 0112 558999999999997645788888888755
No 211
>3k2g_A Resiniferatoxin-binding, phosphotriesterase- related protein; TIM barrel, binuclear zinc, protein structure initiative II (PSI II); 1.80A {Rhodobacter sphaeroides 2}
Probab=24.75 E-value=73 Score=32.92 Aligned_cols=41 Identities=20% Similarity=0.154 Sum_probs=30.7
Q ss_pred hHHHHHHCCCeEEecCCC--CCCch-HHHHHHHhcCcEEE-ecCC
Q 007518 555 AVEEACENGIGVIAEPGG--SIRDG-DAIDCCNKYGVALL-LTSV 595 (600)
Q Consensus 555 ~ve~Aa~aGi~aIIQPGG--SiRD~-evI~aa~e~giaMv-fTg~ 595 (600)
-++.+.++||+.||.|+- --||- .+.+.|.++||..+ -||.
T Consensus 91 ~l~~~~~aGv~tiV~~t~~g~gr~~~~l~~la~~~gv~i~~~tG~ 135 (364)
T 3k2g_A 91 EVKQFAAVGGRSIVDPTCRGIGRDPVKLRRISAETGVQVVMGAGY 135 (364)
T ss_dssp HHHHHHHTTCCEEEECCCBTTTCCHHHHHHHHHHHCCEEEECCSB
T ss_pred HHHHHHhcCCCeEEEeCCCcccCCHHHHHHHHHHhCCcEEEEeCc
Confidence 466788999999999993 35777 56678999998544 4553
No 212
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=24.72 E-value=1.2e+02 Score=30.33 Aligned_cols=46 Identities=22% Similarity=0.226 Sum_probs=35.6
Q ss_pred CcEEEEEecCcccHHHHHHHHHHcCcEEEEech-----hHHHHHHCCCeeE
Q 007518 75 NKQALISLSDKKDLASLGIGLQELGYTIVSTGG-----TATSLENAGVSVT 120 (600)
Q Consensus 75 i~rALISVsDK~glv~~Ak~L~~lGfeIiATgG-----TAk~L~e~GI~v~ 120 (600)
++++++---=.+|+-.+|+.|.++|+++..+.. +.+.|++.|+++.
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~~~~~~~L~~~gi~v~ 54 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMYPPMSTQLEALGIDVY 54 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHTTCEEE
T ss_pred CcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCCcHHHHHHHhCCCEEE
Confidence 456655555678888899999999999998865 4567899998653
No 213
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=24.70 E-value=59 Score=32.67 Aligned_cols=23 Identities=13% Similarity=0.421 Sum_probs=17.6
Q ss_pred CCCCCCc-----hHHHHHHHhcCcEEEe
Q 007518 570 PGGSIRD-----GDAIDCCNKYGVALLL 592 (600)
Q Consensus 570 PGGSiRD-----~evI~aa~e~giaMvf 592 (600)
|||.+-. +++.+.|++||+.+++
T Consensus 203 ~~G~~~~~~~~l~~l~~l~~~~~~~li~ 230 (430)
T 3i4j_A 203 SDAALAPAPGYYERVRDICDEAGIIFIA 230 (430)
T ss_dssp GGTTCCCCTTHHHHHHHHHHHHTCEEEE
T ss_pred cCCcccCCHHHHHHHHHHHHHcCCEEEE
Confidence 5565544 5788999999998885
No 214
>1vb5_A Translation initiation factor EIF-2B; 2.20A {Pyrococcus horikoshii} SCOP: c.124.1.5
Probab=24.54 E-value=1.1e+02 Score=30.47 Aligned_cols=101 Identities=16% Similarity=0.125 Sum_probs=68.7
Q ss_pred EEEEEecCcccHHHHHHHHHH--cCcEEEEec------h--hHHHHHHCCCeeEEecccCCCCCCCCCcccccccccccc
Q 007518 77 QALISLSDKKDLASLGIGLQE--LGYTIVSTG------G--TATSLENAGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGG 146 (600)
Q Consensus 77 rALISVsDK~glv~~Ak~L~~--lGfeIiATg------G--TAk~L~e~GI~v~~VskiTGfPEildGRVKTLHPkIhGG 146 (600)
-.+++.+.-.-.+.+.+.+++ ..|+++.++ | |++.|.+.||+|+.|.+-.-
T Consensus 111 ~~IlT~~~s~Tv~~~l~~a~~~~~~~~V~v~etrP~~qG~~~a~~L~~~gI~vtli~dsa~------------------- 171 (276)
T 1vb5_A 111 DVIITHSFSSTVLEIIRTAKERKKRFKVILTESSPDYEGLHLARELEFSGIEFEVITDAQM------------------- 171 (276)
T ss_dssp EEEECCSCCHHHHHHHHHHHHTTCCEEEEEECCTTTTHHHHHHHHHHHTTCCEEEECGGGH-------------------
T ss_pred CEEEEeCCChHHHHHHHHHHHcCCeEEEEEeCCCcchhhHHHHHHHHHCCCCEEEEcHHHH-------------------
Confidence 344444444556778888866 569999988 6 99999999999999985210
Q ss_pred cccCCCCHHhHHHHHHcCCCceeEEEEeccCcHHhhhcCCCCChhhhhhccccchHHHHHHHHHCCCCEEEEeCCC
Q 007518 147 ILARRDQKHHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGPAMIRAAAKNHKDVLVVVGSE 222 (600)
Q Consensus 147 ILarr~~~~h~~~l~~~~I~~IDlVVVNLYPFe~tv~~~~~~~~ee~IEnIDIGGpsmiRAAAKN~~~V~Vv~dP~ 222 (600)
.+ .| +.+|.|+|---= +..+-.+=|- ||--.+-++|..+-.-|.|+++..
T Consensus 172 --------~~--~m-----~~vd~vivGAd~----------i~~nG~v~nk-iGt~~iA~~A~~~~vp~~V~a~~~ 221 (276)
T 1vb5_A 172 --------GL--FC-----REASIAIVGADM----------ITKDGYVVNK-AGTYLLALACHENAIPFYVAAETY 221 (276)
T ss_dssp --------HH--HH-----TTCSEEEECCSE----------ECTTSCEEEE-TTHHHHHHHHHHTTCCEEEECCGG
T ss_pred --------HH--HH-----ccCCEEEEcccE----------EecCCCEeec-hhHHHHHHHHHHcCCCEEEecccc
Confidence 00 12 248999875321 2222224444 888888888888888888888765
No 215
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=24.35 E-value=55 Score=32.58 Aligned_cols=51 Identities=25% Similarity=0.290 Sum_probs=34.8
Q ss_pred CceEEeecccccCCccchHHHHHHCCCeE-Ee-cCCCCCCc-hHHHHHHHhcCcEEE
Q 007518 538 KGAALASDAFFPFAWKDAVEEACENGIGV-IA-EPGGSIRD-GDAIDCCNKYGVALL 591 (600)
Q Consensus 538 ~GavlASDAFFPF~~~D~ve~Aa~aGi~a-II-QPGGSiRD-~evI~aa~e~giaMv 591 (600)
.-+++++=+-+ --|.++.|.++|++. |+ ++|=+..| ++++++|.++|+.++
T Consensus 66 D~viI~tP~~~---~~~~~~ea~~~Gi~~iVi~t~G~~~~~~~~l~~~A~~~gv~li 119 (288)
T 2nu8_A 66 TASVIYVPAPF---CKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEAGVRMI 119 (288)
T ss_dssp CEEEECCCGGG---HHHHHHHHHHTTCSEEEECCCCCCHHHHHHHHHHHHHHTCEEE
T ss_pred CEEEEecCHHH---HHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHcCCEEE
Confidence 34454443333 338999999999997 43 55444433 289999999999765
No 216
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=24.34 E-value=41 Score=32.33 Aligned_cols=126 Identities=13% Similarity=0.151 Sum_probs=65.3
Q ss_pred cEEEEEecCcccHHHHHHHHHHcCcEEEEechhHHHHHHCCCeeEEecccCCCCCCCCCcccccccccccccccCCCCHH
Q 007518 76 KQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLENAGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKH 155 (600)
Q Consensus 76 ~rALISVsDK~glv~~Ak~L~~lGfeIiATgGTAk~L~e~GI~v~~VskiTGfPEildGRVKTLHPkIhGGILarr~~~~ 155 (600)
|++||+....-==..+|+.|.+.|+.++.++-....+++. ..+ +++++..+. +=+ .+++
T Consensus 28 k~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~------~~~-------~~~~~~~~~-----~Dv---~d~~ 86 (266)
T 3grp_A 28 RKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEI------AAD-------LGKDVFVFS-----ANL---SDRK 86 (266)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH------HHH-------HCSSEEEEE-----CCT---TSHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH------HHH-------hCCceEEEE-----eec---CCHH
Confidence 6789988754333678999999999999987766666552 111 123333221 222 2334
Q ss_pred hHHHHHH---cCCCceeEEEEeccCcHHhhhcCCCCChhhhhh--ccccchH-HHHHHHHH-----CCCCEEEEeCCCCH
Q 007518 156 HMDALSE---HGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIE--NIDIGGP-AMIRAAAK-----NHKDVLVVVGSEDY 224 (600)
Q Consensus 156 h~~~l~~---~~I~~IDlVVVNLYPFe~tv~~~~~~~~ee~IE--nIDIGGp-smiRAAAK-----N~~~V~Vv~dP~DY 224 (600)
.++++-+ ...++||+||.|-=.....--. ..+.++.-+ ++..-|+ -|+|++.+ +..+++.+++..-|
T Consensus 87 ~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~--~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~Iv~isS~~~~ 164 (266)
T 3grp_A 87 SIKQLAEVAEREMEGIDILVNNAGITRDGLFV--RMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGV 164 (266)
T ss_dssp HHHHHHHHHHHHHTSCCEEEECCCCC-----C--CCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCC---
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcc--cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEECCHHHc
Confidence 4433322 1235899999986433211101 223333332 2444453 34555543 44567777775543
No 217
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}
Probab=24.21 E-value=47 Score=31.87 Aligned_cols=34 Identities=18% Similarity=0.089 Sum_probs=25.7
Q ss_pred CCcEEEEEecCcccHHHHHHHHHHcCcEEEEech
Q 007518 74 ANKQALISLSDKKDLASLGIGLQELGYTIVSTGG 107 (600)
Q Consensus 74 ~i~rALISVsDK~glv~~Ak~L~~lGfeIiATgG 107 (600)
.-|++||+....-==..+|+.|.+.|++++.+.-
T Consensus 13 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r 46 (269)
T 3vtz_A 13 TDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSL 46 (269)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeC
Confidence 4568999887543335788999999999988753
No 218
>4ehi_A Bifunctional purine biosynthesis protein PURH; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE BTB; 2.28A {Campylobacter jejuni subsp}
Probab=24.10 E-value=1.4e+02 Score=33.18 Aligned_cols=92 Identities=18% Similarity=0.156 Sum_probs=63.8
Q ss_pred cceeecCCCCCHHHHHHHHHHHHHHhhhcc-eEEEEEeCCeEEEecCCCCcHHHHHHHHHHHcC--Cc---cCceEEeec
Q 007518 472 QFKVVSEKKPQESELHDAEFAWLCVKHVKS-NAIVIAKNNCMLGMGSGQPNRRESLRIAMKKAG--DE---VKGAALASD 545 (600)
Q Consensus 472 ~~~vVT~~~Pt~~e~~dL~FAwkvvKhvKS-NAIV~ak~~~tvGiGaGQ~sRVds~~iA~~kA~--~~---~~GavlASD 545 (600)
.+++.-. .|+---+-|+.-||++++-.+. +|.|+.|...--|++-|.+ +..|-.||- |. .-|.|..++
T Consensus 254 ~~~qL~G-elSYNNllDadaA~~lv~ef~~~Pa~aivKH~nPCGvA~g~~-----l~~Ay~~A~~~Dp~SaFGGiiA~Nr 327 (534)
T 4ehi_A 254 NFKALKG-EASFNNLTDINAALNLASSFDKAPAIAIVKHGNPCGFAIKEN-----LVQSYIHALKCDSVSAYGGVVAING 327 (534)
T ss_dssp HCEEEES-CCCHHHHHHHHHHHHHHTSSTTSCEEEEEETTEEEEEEECSS-----HHHHHHHHHTTCHHHHTTCEEEEEE
T ss_pred cceEecc-ccCccchHhHHHHHHHHHhcCCCCEEEEEecCCcchhhcCcc-----HHHHHHHHHhcCCccccCCEEEECC
Confidence 4677777 9999999999999999999988 9999999999999998875 567777773 32 234443333
Q ss_pred ccccCCccchHHHHHHCCCeEEecCCCC
Q 007518 546 AFFPFAWKDAVEEACENGIGVIAEPGGS 573 (600)
Q Consensus 546 AFFPF~~~D~ve~Aa~aGi~aIIQPGGS 573 (600)
.. . .+.-+...+.=...||.||=+
T Consensus 328 ~v---D-~~tA~~i~~~F~EvVIAP~y~ 351 (534)
T 4ehi_A 328 TL---D-EALANKINEIYVEVIIAANVD 351 (534)
T ss_dssp EE---C-HHHHHHHTTSCCSEEEEEEEC
T ss_pred cc---C-HHHHHHHhhhEEEEEEcCCCC
Confidence 22 1 123333333444566666543
No 219
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=23.53 E-value=3.6e+02 Score=25.92 Aligned_cols=30 Identities=20% Similarity=0.158 Sum_probs=21.7
Q ss_pred CcEEEEEecCcccH--HHHHHHHHHcCcEEEEec
Q 007518 75 NKQALISLSDKKDL--ASLGIGLQELGYTIVSTG 106 (600)
Q Consensus 75 i~rALISVsDK~gl--v~~Ak~L~~lGfeIiATg 106 (600)
.+++||+.. +|. -.+++.|.+.|+++++..
T Consensus 25 ~~~vlVtGa--tG~iG~~l~~~L~~~g~~V~~~~ 56 (351)
T 3ruf_A 25 PKTWLITGV--AGFIGSNLLEKLLKLNQVVIGLD 56 (351)
T ss_dssp CCEEEEETT--TSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCeEEEECC--CcHHHHHHHHHHHHCCCEEEEEe
Confidence 467888876 333 367788888898888864
No 220
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=23.52 E-value=55 Score=32.71 Aligned_cols=19 Identities=32% Similarity=0.403 Sum_probs=10.4
Q ss_pred hHHHHHHCCCeEE--ecCCCC
Q 007518 555 AVEEACENGIGVI--AEPGGS 573 (600)
Q Consensus 555 ~ve~Aa~aGi~aI--IQPGGS 573 (600)
-++.+.++|+..| +.|--+
T Consensus 140 ~~~~~~~~gl~~i~liaP~t~ 160 (267)
T 3vnd_A 140 FSKAAKAHGIAPIFIAPPNAD 160 (267)
T ss_dssp HHHHHHHTTCEEECEECTTCC
T ss_pred HHHHHHHcCCeEEEEECCCCC
Confidence 3445556676654 455544
No 221
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=23.43 E-value=2.2e+02 Score=26.04 Aligned_cols=31 Identities=26% Similarity=0.320 Sum_probs=23.3
Q ss_pred cEEEEEecCcccHHHHHHHHHHcCcEEEEec
Q 007518 76 KQALISLSDKKDLASLGIGLQELGYTIVSTG 106 (600)
Q Consensus 76 ~rALISVsDK~glv~~Ak~L~~lGfeIiATg 106 (600)
+++||+....-=-..+++.|.+.|++++.+.
T Consensus 6 ~~vlItGasggiG~~~a~~l~~~G~~V~~~~ 36 (247)
T 2hq1_A 6 KTAIVTGSSRGLGKAIAWKLGNMGANIVLNG 36 (247)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred cEEEEECCCchHHHHHHHHHHHCCCEEEEEc
Confidence 5688877643223578899999999999873
No 222
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=23.35 E-value=81 Score=29.13 Aligned_cols=34 Identities=21% Similarity=0.420 Sum_probs=18.8
Q ss_pred chHHHHHHCCCeEEecCCCCCCchHHHHHHHhcCcEE
Q 007518 554 DAVEEACENGIGVIAEPGGSIRDGDAIDCCNKYGVAL 590 (600)
Q Consensus 554 D~ve~Aa~aGi~aIIQPGGSiRD~evI~aa~e~giaM 590 (600)
|-++.|.++|+..|.-|. .|.++++++.++|+.+
T Consensus 71 ~~i~~a~~~Gad~V~~~~---~~~~~~~~~~~~g~~~ 104 (212)
T 2v82_A 71 EQVDALARMGCQLIVTPN---IHSEVIRRAVGYGMTV 104 (212)
T ss_dssp HHHHHHHHTTCCEEECSS---CCHHHHHHHHHTTCEE
T ss_pred HHHHHHHHcCCCEEEeCC---CCHHHHHHHHHcCCCE
Confidence 556666666666655222 3555666666666544
No 223
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=23.25 E-value=59 Score=32.60 Aligned_cols=39 Identities=28% Similarity=0.470 Sum_probs=29.5
Q ss_pred cchHHHHHHCCCe-EEecCCC-CCCc-hHHHHHHHhcCcEEE
Q 007518 553 KDAVEEACENGIG-VIAEPGG-SIRD-GDAIDCCNKYGVALL 591 (600)
Q Consensus 553 ~D~ve~Aa~aGi~-aIIQPGG-SiRD-~evI~aa~e~giaMv 591 (600)
-|.+++|.++|++ .|+-+.| +..| +++.++|.++||.++
T Consensus 84 ~~~v~ea~~~Gi~~vVi~t~G~~~~~~~~l~~~A~~~gi~vi 125 (294)
T 2yv1_A 84 KDAVFEAIDAGIELIVVITEHIPVHDTMEFVNYAEDVGVKII 125 (294)
T ss_dssp HHHHHHHHHTTCSEEEECCSCCCHHHHHHHHHHHHHHTCEEE
T ss_pred HHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHcCCEEE
Confidence 3899999999999 4544444 4333 389999999999655
No 224
>1yx1_A Hypothetical protein PA2260; structural genomics, PSI, PROT structure initiative; HET: MSE; 1.80A {Pseudomonas aeruginosa PAO1} SCOP: c.1.15.7
Probab=23.16 E-value=37 Score=32.07 Aligned_cols=18 Identities=11% Similarity=0.226 Sum_probs=9.9
Q ss_pred hHHHHHHCCCeEEecCCC
Q 007518 555 AVEEACENGIGVIAEPGG 572 (600)
Q Consensus 555 ~ve~Aa~aGi~aIIQPGG 572 (600)
..+.|.+.||+-.++|-+
T Consensus 117 l~~~a~~~Gv~l~lEn~~ 134 (264)
T 1yx1_A 117 LGRRLARHGLQLLVENDQ 134 (264)
T ss_dssp HHHHHTTSSCEEEEECCS
T ss_pred HHHHHHhcCCEEEEecCC
Confidence 344455556666666554
No 225
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*
Probab=23.13 E-value=59 Score=33.13 Aligned_cols=39 Identities=18% Similarity=0.394 Sum_probs=26.5
Q ss_pred chHHHHHH---CCCeEEe------cCCCCCCc-----hHHHHHHHhcCcEEEe
Q 007518 554 DAVEEACE---NGIGVIA------EPGGSIRD-----GDAIDCCNKYGVALLL 592 (600)
Q Consensus 554 D~ve~Aa~---aGi~aII------QPGGSiRD-----~evI~aa~e~giaMvf 592 (600)
|.+|.+.+ ..+.+|| .|||.+-. +++.+.|++||+.+|+
T Consensus 198 ~~le~~l~~~~~~~a~vi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~ 250 (448)
T 3dod_A 198 RELAQLLEEHHEEIAALSIESMVQGASGMIVMPEGYLAGVRELCTTYDVLMIV 250 (448)
T ss_dssp HHHHHHHHHHGGGEEEEEEESSEESTTTCEECCTTHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHhCCCCEEEEEEeCcccCCCCeecCCHHHHHHHHHHHHHhCCEEEE
Confidence 34555554 3455665 56775543 6788999999999985
No 226
>3re1_A Uroporphyrinogen-III synthetase; HEMD-like family, uroporphyrinogen III synthase, HMB, lyase; 2.50A {Pseudomonas syringae PV}
Probab=23.06 E-value=68 Score=31.08 Aligned_cols=41 Identities=22% Similarity=0.093 Sum_probs=30.3
Q ss_pred CcccHHHHHHHHHHcC-----cEEEEec-hhHHHHHHCCCeeEEecc
Q 007518 84 DKKDLASLGIGLQELG-----YTIVSTG-GTATSLENAGVSVTKVEQ 124 (600)
Q Consensus 84 DK~glv~~Ak~L~~lG-----feIiATg-GTAk~L~e~GI~v~~Vsk 124 (600)
.+.++.-|.+.|.+.| ..+++-| +|++.|++.|+.+..+.+
T Consensus 74 S~naV~~~~~~l~~~~~~~~~~~i~aVG~~Ta~aL~~~G~~~~~~~~ 120 (269)
T 3re1_A 74 SKPAARLAIELIDEVWPQPPMQPWFSVGSATGQILLDYGLDASWPEQ 120 (269)
T ss_dssp SHHHHHHHHHHHHHHCSSCCCSCEEESSHHHHHHHHHTTCCEECC--
T ss_pred CHHHHHHHHHHHHHhCCCcccCEEEEECHHHHHHHHHcCCCcccCCC
Confidence 4566667777776654 5688886 899999999999876643
No 227
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=23.03 E-value=1.9e+02 Score=28.07 Aligned_cols=128 Identities=19% Similarity=0.204 Sum_probs=65.4
Q ss_pred cEEEEEecCcccHHHHHHHHHHcCc---EEEEechhHHHHHHCCCeeEEecccCCCCCCCCCcccccccccccccccCCC
Q 007518 76 KQALISLSDKKDLASLGIGLQELGY---TIVSTGGTATSLENAGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRD 152 (600)
Q Consensus 76 ~rALISVsDK~glv~~Ak~L~~lGf---eIiATgGTAk~L~e~GI~v~~VskiTGfPEildGRVKTLHPkIhGGILarr~ 152 (600)
|++||+....-==..+|+.|.+.|+ .++.++-....+++.- ..+.+. + -+++|..+. ++=.
T Consensus 34 k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~---~~l~~~--~---~~~~~~~~~--------~Dv~ 97 (287)
T 3rku_A 34 KTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELK---KTIDQE--F---PNAKVHVAQ--------LDIT 97 (287)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH---HHHHHH--C---TTCEEEEEE--------CCTT
T ss_pred CEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHH---HHHHhh--C---CCCeEEEEE--------CCCC
Confidence 6799988754323678899999998 9988876655554410 000000 0 012222211 1112
Q ss_pred CHHhHHHHHHc---CCCceeEEEEeccCcH--HhhhcCCCCChhhhhhccc--cch-HHHHHHHH-----HCCCCEEEEe
Q 007518 153 QKHHMDALSEH---GIGTFDLVVVNLYPFY--DKVTSAGGIDFEDGIENID--IGG-PAMIRAAA-----KNHKDVLVVV 219 (600)
Q Consensus 153 ~~~h~~~l~~~---~I~~IDlVVVNLYPFe--~tv~~~~~~~~ee~IEnID--IGG-psmiRAAA-----KN~~~V~Vv~ 219 (600)
+++.++++-+. ..++||+||.|-=-.. ..+. ..+.++.-+.+| .-| .-++|++. ++..+++.++
T Consensus 98 d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~---~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~is 174 (287)
T 3rku_A 98 QAEKIKPFIENLPQEFKDIDILVNNAGKALGSDRVG---QIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLG 174 (287)
T ss_dssp CGGGHHHHHHTSCGGGCSCCEEEECCCCCCCCCCTT---SCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEC
T ss_pred CHHHHHHHHHHHHHhcCCCCEEEECCCcCCCCCCcc---cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEC
Confidence 34455554432 2358999999853211 1111 234444433333 334 45667664 3556677776
Q ss_pred CCC
Q 007518 220 GSE 222 (600)
Q Consensus 220 dP~ 222 (600)
+..
T Consensus 175 S~~ 177 (287)
T 3rku_A 175 SIA 177 (287)
T ss_dssp CGG
T ss_pred Chh
Confidence 644
No 228
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=22.93 E-value=1.3e+02 Score=29.80 Aligned_cols=51 Identities=22% Similarity=0.199 Sum_probs=39.3
Q ss_pred CCcEEEEEec----CcccHHHHHHHHHHcCcEE--EEechhHHHHHHCCCeeEEecc
Q 007518 74 ANKQALISLS----DKKDLASLGIGLQELGYTI--VSTGGTATSLENAGVSVTKVEQ 124 (600)
Q Consensus 74 ~i~rALISVs----DK~glv~~Ak~L~~lGfeI--iATgGTAk~L~e~GI~v~~Vsk 124 (600)
.++++|+... +-.-++.+|+.|.+.|+++ ++++.-...+++.|+++..+..
T Consensus 19 ~m~rIl~~~~~~~GHv~p~l~La~~L~~~Gh~V~v~~~~~~~~~~~~~G~~~~~~~~ 75 (415)
T 3rsc_A 19 HMAHLLIVNVASHGLILPTLTVVTELVRRGHRVSYVTAGGFAEPVRAAGATVVPYQS 75 (415)
T ss_dssp CCCEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHHTTCEEEECCC
T ss_pred cCCEEEEEeCCCccccccHHHHHHHHHHCCCEEEEEeCHHHHHHHHhcCCEEEeccc
Confidence 4567766554 5677899999999999865 4556667889999999888764
No 229
>2y1h_A Putative deoxyribonuclease tatdn3; hydrolase; 2.50A {Homo sapiens}
Probab=22.84 E-value=82 Score=29.89 Aligned_cols=42 Identities=14% Similarity=0.165 Sum_probs=33.2
Q ss_pred chHHHHHHCCCeEEecCCCCCCch-HHHHHHHhcCc-EEEecCC
Q 007518 554 DAVEEACENGIGVIAEPGGSIRDG-DAIDCCNKYGV-ALLLTSV 595 (600)
Q Consensus 554 D~ve~Aa~aGi~aIIQPGGSiRD~-evI~aa~e~gi-aMvfTg~ 595 (600)
+.++.+.++||+.+|-+|.+.+|- .+++.|.+++. ...++|.
T Consensus 24 ~~l~~~~~~Gv~~~v~~~~~~~~~~~~~~l~~~~~~~i~~~~Gi 67 (272)
T 2y1h_A 24 DVLEKAKKANVVALVAVAEHSGEFEKIMQLSERYNGFVLPCLGV 67 (272)
T ss_dssp HHHHHHHHTTEEEEEECCSSGGGHHHHHHHHHHTTTTEEEEECC
T ss_pred HHHHHHHHCCCCEEEEeCCCHHHHHHHHHHHHHCCCCEEEEEEE
Confidence 457788999999999999888775 68889999984 4445564
No 230
>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes}
Probab=22.78 E-value=2e+02 Score=25.51 Aligned_cols=34 Identities=18% Similarity=0.298 Sum_probs=26.7
Q ss_pred cccHHHHHHHHHHcCcEE-EEechh-------HHHHHHCCCe
Q 007518 85 KKDLASLGIGLQELGYTI-VSTGGT-------ATSLENAGVS 118 (600)
Q Consensus 85 K~glv~~Ak~L~~lGfeI-iATgGT-------Ak~L~e~GI~ 118 (600)
..|+.++.+.|.+.|+.+ +.|++. ...|+..|+.
T Consensus 36 ~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~ 77 (189)
T 3ib6_A 36 RKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGII 77 (189)
T ss_dssp CTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCG
T ss_pred CcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCch
Confidence 478999999999999987 566443 5678888873
No 231
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Probab=22.77 E-value=1.1e+02 Score=28.74 Aligned_cols=32 Identities=25% Similarity=0.161 Sum_probs=23.7
Q ss_pred cEEEEEecCcccHHHHHHHHHHcCcEEEEech
Q 007518 76 KQALISLSDKKDLASLGIGLQELGYTIVSTGG 107 (600)
Q Consensus 76 ~rALISVsDK~glv~~Ak~L~~lGfeIiATgG 107 (600)
+++||+-...-==..+|+.|.+.|++++.+.-
T Consensus 5 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r 36 (260)
T 1x1t_A 5 KVAVVTGSTSGIGLGIATALAAQGADIVLNGF 36 (260)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEECC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeC
Confidence 46787776432236788999999999998754
No 232
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=22.67 E-value=4.3e+02 Score=23.93 Aligned_cols=106 Identities=22% Similarity=0.194 Sum_probs=61.5
Q ss_pred CcEEEEEecCcccHHHHHHHHHHcCcEEEEechhH---HHHHHCCC-eeEEecccCCCCCCCCCcccccccccccccccC
Q 007518 75 NKQALISLSDKKDLASLGIGLQELGYTIVSTGGTA---TSLENAGV-SVTKVEQLTCFPEMLDGRVKTLHPNIHGGILAR 150 (600)
Q Consensus 75 i~rALISVsDK~glv~~Ak~L~~lGfeIiATgGTA---k~L~e~GI-~v~~VskiTGfPEildGRVKTLHPkIhGGILar 150 (600)
-+++||+...--==-.+++.|.+.|++++.+.-+. +.|.+.|+ .+.. -+++
T Consensus 21 ~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~-~Dl~------------------------ 75 (236)
T 3e8x_A 21 GMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRERGASDIVV-ANLE------------------------ 75 (236)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHTTCSEEEE-CCTT------------------------
T ss_pred CCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHhCCCceEEE-cccH------------------------
Confidence 35789888743223578899999999999886443 34444554 3321 1222
Q ss_pred CCCHHhHHHHHHcCCCceeEEEEeccCcHHhhhcCCCCChhhhhhccccch-HHHHHHHHHC-CCCEEEEeCC
Q 007518 151 RDQKHHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGG-PAMIRAAAKN-HKDVLVVVGS 221 (600)
Q Consensus 151 r~~~~h~~~l~~~~I~~IDlVVVNLYPFe~tv~~~~~~~~ee~IEnIDIGG-psmiRAAAKN-~~~V~Vv~dP 221 (600)
....+. ++.+|.||.|.-+... .++++.++ +++-| -.+++++.++ .++++.+++-
T Consensus 76 ~~~~~~--------~~~~D~vi~~ag~~~~-------~~~~~~~~-~n~~~~~~l~~a~~~~~~~~iv~~SS~ 132 (236)
T 3e8x_A 76 EDFSHA--------FASIDAVVFAAGSGPH-------TGADKTIL-IDLWGAIKTIQEAEKRGIKRFIMVSSV 132 (236)
T ss_dssp SCCGGG--------GTTCSEEEECCCCCTT-------SCHHHHHH-TTTHHHHHHHHHHHHHTCCEEEEECCT
T ss_pred HHHHHH--------HcCCCEEEECCCCCCC-------CCccccch-hhHHHHHHHHHHHHHcCCCEEEEEecC
Confidence 111111 1368999988765431 23444443 45555 4677777664 4567666663
No 233
>3rqi_A Response regulator protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PHD CIT; 1.70A {Burkholderia pseudomallei}
Probab=22.67 E-value=3.8e+02 Score=23.32 Aligned_cols=37 Identities=22% Similarity=0.314 Sum_probs=22.8
Q ss_pred cEEEEEecCcccHHHHHHHHHHcCcEEEEechhHHHH
Q 007518 76 KQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSL 112 (600)
Q Consensus 76 ~rALISVsDK~glv~~Ak~L~~lGfeIiATgGTAk~L 112 (600)
.++||-=.|..-...+...|.+.||++.........|
T Consensus 8 ~~iLivdd~~~~~~~l~~~L~~~g~~v~~~~~~~~al 44 (184)
T 3rqi_A 8 KNFLVIDDNEVFAGTLARGLERRGYAVRQAHNKDEAL 44 (184)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHTTCEEEEECSHHHHH
T ss_pred CeEEEEcCCHHHHHHHHHHHHHCCCEEEEeCCHHHHH
Confidence 4566644456556667777888888876554433333
No 234
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=22.65 E-value=2.6e+02 Score=26.65 Aligned_cols=35 Identities=14% Similarity=0.051 Sum_probs=25.8
Q ss_pred cEEEEEecCcccHHHHHHHHHHcCcEEEEechhHH
Q 007518 76 KQALISLSDKKDLASLGIGLQELGYTIVSTGGTAT 110 (600)
Q Consensus 76 ~rALISVsDK~glv~~Ak~L~~lGfeIiATgGTAk 110 (600)
+++||+....-=-..+|+.|.+.|++++.+.-...
T Consensus 45 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~ 79 (285)
T 2c07_A 45 KVALVTGAGRGIGREIAKMLAKSVSHVICISRTQK 79 (285)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHH
Confidence 57899887533235788999999999998764433
No 235
>3i45_A Twin-arginine translocation pathway signal protei; structural genomics; 1.36A {Rhodospirillum rubrum}
Probab=22.62 E-value=53 Score=32.30 Aligned_cols=72 Identities=17% Similarity=0.106 Sum_probs=47.8
Q ss_pred HHHHHHHHHHcCC--ccCc-----eEEeecccccCCccchHHHHHH-CCCeEEecCCCCCCchHHHHHHHhcCcEEEecC
Q 007518 523 RESLRIAMKKAGD--EVKG-----AALASDAFFPFAWKDAVEEACE-NGIGVIAEPGGSIRDGDAIDCCNKYGVALLLTS 594 (600)
Q Consensus 523 Vds~~iA~~kA~~--~~~G-----avlASDAFFPF~~~D~ve~Aa~-aGi~aIIQPGGSiRD~evI~aa~e~giaMvfTg 594 (600)
..++++|++..+. .+.| .++.-|..=|...-..++.+.+ .||.+||-|.+|--...+...|++++|+||.++
T Consensus 25 ~~g~~~a~~~iN~~ggi~Gg~~i~l~~~D~~~~~~~~~~~~~~li~~~~v~aiiG~~~s~~~~a~~~~~~~~~ip~i~~~ 104 (387)
T 3i45_A 25 RNGWQLAVEQINAAGGLLGGRPLEVISRDDGGDPGKAVTAAQELLTRHGVHALAGTFLSHVGLAVSDFARQRKVLFMASE 104 (387)
T ss_dssp HHHHHHHHHHHHHTTCBTTTBCEEEEEEECTTCHHHHHHHHHHHHHHHCCSEEEECCSHHHHHHHHHHHHHHTCCEEECS
T ss_pred HHHHHHHHHHHHhcCCCCCCcceEEEEecCCCCHHHHHHHHHHHHHhcCCEEEECCcchHHHHHHHHHHHHcCceEEecC
Confidence 4567777776522 1223 3444444444332234445555 599999999999777789999999999999864
No 236
>4hb7_A Dihydropteroate synthase; transferase; 1.95A {Staphylococcus aureus} PDB: 1ad1_A 1ad4_A*
Probab=22.61 E-value=1.5e+02 Score=30.00 Aligned_cols=54 Identities=17% Similarity=0.316 Sum_probs=33.3
Q ss_pred ceEEeecccccCCccchHHHHHHCCCeEEecCCCCCCchHHHHHHHhcCcEEEecCCc
Q 007518 539 GAALASDAFFPFAWKDAVEEACENGIGVIAEPGGSIRDGDAIDCCNKYGVALLLTSVR 596 (600)
Q Consensus 539 GavlASDAFFPF~~~D~ve~Aa~aGi~aIIQPGGSiRD~evI~aa~e~giaMvfTg~R 596 (600)
+..+.=|-|-| ...+.|.++|+.-|=---|-.+|++..+.|-++|.++|..++|
T Consensus 81 ~v~iSIDT~~~----~Va~~al~aGa~iINDVs~g~~d~~m~~~va~~~~~~vlMH~~ 134 (270)
T 4hb7_A 81 DVKISVDTFRS----EVAEACLKLGVDMINDQWAGLYDHRMFQIVAKYDAEIILMHNG 134 (270)
T ss_dssp SSEEEEECSCH----HHHHHHHHHTCCEEEETTTTSSCTHHHHHHHHTTCEEEEECCC
T ss_pred CCeEEEECCCH----HHHHHHHHhccceeccccccccchhHHHHHHHcCCCeEEeccc
Confidence 56666666654 5566777777654433334445677777777777777766554
No 237
>3iix_A Biotin synthetase, putative; adoMet radical, SAM radical, adoMet cleavage, Fe4S4 cluster, HYDE, hydrogenase, maturation, beta barrel; HET: OTY CSO 5AD CPS; 1.25A {Thermotoga maritima} PDB: 3ciw_A* 3iiz_A* 3cix_A*
Probab=22.58 E-value=1e+02 Score=30.36 Aligned_cols=48 Identities=10% Similarity=0.185 Sum_probs=35.0
Q ss_pred CCcEEEEEecC-----cccHHHHHHHHHHcCcEEEEech-----hHHHHHHCCCeeEE
Q 007518 74 ANKQALISLSD-----KKDLASLGIGLQELGYTIVSTGG-----TATSLENAGVSVTK 121 (600)
Q Consensus 74 ~i~rALISVsD-----K~glv~~Ak~L~~lGfeIiATgG-----TAk~L~e~GI~v~~ 121 (600)
+++++.++-.+ .+.+.++.+.+.+.|+.|..|.| ..+.|+++|+....
T Consensus 100 g~~~i~~~gGe~p~~~~~~~~~li~~i~~~~~~i~~s~g~l~~e~l~~L~~ag~~~v~ 157 (348)
T 3iix_A 100 GAKTIVLQSGEDPYXMPDVISDIVKEIKKMGVAVTLSLGEWPREYYEKWKEAGADRYL 157 (348)
T ss_dssp TCSEEEEEESCCGGGTTHHHHHHHHHHHTTSCEEEEECCCCCHHHHHHHHHHTCCEEE
T ss_pred CCCEEEEEeCCCCCccHHHHHHHHHHHHhcCceEEEecCCCCHHHHHHHHHhCCCEEe
Confidence 45667665442 36788999999998999986655 56788888985444
No 238
>3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis}
Probab=22.51 E-value=49 Score=29.74 Aligned_cols=82 Identities=9% Similarity=0.003 Sum_probs=0.0
Q ss_pred cccHHHHHHHHHHcCcEE-EEechhHHHHHHCCCeeEEecccCCCCCCCCCccc----ccccccccccccCCCCHHhHHH
Q 007518 85 KKDLASLGIGLQELGYTI-VSTGGTATSLENAGVSVTKVEQLTCFPEMLDGRVK----TLHPNIHGGILARRDQKHHMDA 159 (600)
Q Consensus 85 K~glv~~Ak~L~~lGfeI-iATgGTAk~L~e~GI~v~~VskiTGfPEildGRVK----TLHPkIhGGILarr~~~~h~~~ 159 (600)
..|+.++.+.|.+.|+.+ +.|++....++. +.+..|+++.++-++. .+..++.+-........+.+..
T Consensus 94 ~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~-------~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~K~~~~~~ 166 (232)
T 3fvv_A 94 TVQAVDVVRGHLAAGDLCALVTATNSFVTAP-------IARAFGVQHLIATDPEYRDGRYTGRIEGTPSFREGKVVRVNQ 166 (232)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEESSCHHHHHH-------HHHHTTCCEEEECEEEEETTEEEEEEESSCSSTHHHHHHHHH
T ss_pred CHHHHHHHHHHHHCCCEEEEEeCCCHHHHHH-------HHHHcCCCEEEEcceEEECCEEeeeecCCCCcchHHHHHHHH
Q ss_pred HHH-cC---CCceeEEEE
Q 007518 160 LSE-HG---IGTFDLVVV 173 (600)
Q Consensus 160 l~~-~~---I~~IDlVVV 173 (600)
+.+ +| +.+=++|++
T Consensus 167 ~~~~~~~~~~~~~~~~~v 184 (232)
T 3fvv_A 167 WLAGMGLALGDFAESYFY 184 (232)
T ss_dssp HHHHTTCCGGGSSEEEEE
T ss_pred HHHHcCCCcCchhheEEE
No 239
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Probab=22.50 E-value=70 Score=32.09 Aligned_cols=24 Identities=13% Similarity=0.050 Sum_probs=19.6
Q ss_pred cCCCCCCc-----hHHHHHHHhcCcEEEe
Q 007518 569 EPGGSIRD-----GDAIDCCNKYGVALLL 592 (600)
Q Consensus 569 QPGGSiRD-----~evI~aa~e~giaMvf 592 (600)
.+||.+-+ +++.+.|++||+.+|+
T Consensus 210 ~~~G~~~~~~~~l~~l~~l~~~~~~~li~ 238 (427)
T 3fq8_A 210 GNSGFIVPDAGFLEGLREITLEHDALLVF 238 (427)
T ss_dssp CTTSCBCCCTTHHHHHHHHHHHTTCEEEE
T ss_pred CCCCCcCCCHHHHHHHHHHHHHcCCEEEE
Confidence 56777776 6889999999998875
No 240
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=22.46 E-value=2.8e+02 Score=24.92 Aligned_cols=41 Identities=12% Similarity=-0.002 Sum_probs=28.0
Q ss_pred CCcEEEEEecCcccHHHHHHHHHHc--CcEEEEechhHHHHHH
Q 007518 74 ANKQALISLSDKKDLASLGIGLQEL--GYTIVSTGGTATSLEN 114 (600)
Q Consensus 74 ~i~rALISVsDK~glv~~Ak~L~~l--GfeIiATgGTAk~L~e 114 (600)
..+++||+...--=--.+++.|.+. |++++...-....+.+
T Consensus 3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~ 45 (253)
T 1xq6_A 3 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEK 45 (253)
T ss_dssp SCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHH
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhh
Confidence 3467888876332235788999999 8999987655554444
No 241
>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2
Probab=22.46 E-value=3.1e+02 Score=25.04 Aligned_cols=38 Identities=21% Similarity=0.193 Sum_probs=26.4
Q ss_pred cEEEEEecCcccHHHHHHHHHHcCc-------EEEEechhHHHHH
Q 007518 76 KQALISLSDKKDLASLGIGLQELGY-------TIVSTGGTATSLE 113 (600)
Q Consensus 76 ~rALISVsDK~glv~~Ak~L~~lGf-------eIiATgGTAk~L~ 113 (600)
+++||+....-=-..+++.|.+.|+ .++.+.-....++
T Consensus 3 k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~ 47 (244)
T 2bd0_A 3 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLE 47 (244)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHH
Confidence 4577777643223578999999999 8988866554443
No 242
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=22.44 E-value=2.7e+02 Score=26.97 Aligned_cols=38 Identities=18% Similarity=0.080 Sum_probs=28.0
Q ss_pred cEEEEEecCcccHHHHHHHHHHcCcEEEEechhHHHHH
Q 007518 76 KQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLE 113 (600)
Q Consensus 76 ~rALISVsDK~glv~~Ak~L~~lGfeIiATgGTAk~L~ 113 (600)
+++||+....-=-..+|+.|.+.|++++.+.-....++
T Consensus 35 k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~ 72 (291)
T 3cxt_A 35 KIALVTGASYGIGFAIASAYAKAGATIVFNDINQELVD 72 (291)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 57899887543336789999999999998865544443
No 243
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=22.31 E-value=63 Score=32.28 Aligned_cols=39 Identities=28% Similarity=0.367 Sum_probs=29.4
Q ss_pred cchHHHHHHCCCe-EEecCCC-CCCc-hHHHHHHHhcCcEEE
Q 007518 553 KDAVEEACENGIG-VIAEPGG-SIRD-GDAIDCCNKYGVALL 591 (600)
Q Consensus 553 ~D~ve~Aa~aGi~-aIIQPGG-SiRD-~evI~aa~e~giaMv 591 (600)
.|.+++|.++|++ .|+-..| +..| +++.++|.++||.++
T Consensus 78 ~~~~~ea~~~Gi~~vVi~t~G~~~~~~~~l~~~a~~~gi~vi 119 (288)
T 1oi7_A 78 ADAALEAAHAGIPLIVLITEGIPTLDMVRAVEEIKALGSRLI 119 (288)
T ss_dssp HHHHHHHHHTTCSEEEECCSCCCHHHHHHHHHHHHHHTCEEE
T ss_pred HHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHcCCEEE
Confidence 3899999999999 4544444 4333 389999999999765
No 244
>3snk_A Response regulator CHEY-like protein; P-loop containing nucleoside triphosphate hydrolases, struct genomics; 2.02A {Mesorhizobium loti}
Probab=22.27 E-value=3.1e+02 Score=22.20 Aligned_cols=33 Identities=21% Similarity=0.221 Sum_probs=21.8
Q ss_pred CCcEEEEEecCcccHHHHHHHHHHcC-cEEEEec
Q 007518 74 ANKQALISLSDKKDLASLGIGLQELG-YTIVSTG 106 (600)
Q Consensus 74 ~i~rALISVsDK~glv~~Ak~L~~lG-feIiATg 106 (600)
...++||-=.|..-...+...|.+.| |++....
T Consensus 13 ~~~~ilivdd~~~~~~~l~~~L~~~g~~~v~~~~ 46 (135)
T 3snk_A 13 KRKQVALFSSDPNFKRDVATRLDALAIYDVRVSE 46 (135)
T ss_dssp CCEEEEEECSCHHHHHHHHHHHHHTSSEEEEEEC
T ss_pred CCcEEEEEcCCHHHHHHHHHHHhhcCCeEEEEec
Confidence 34467665556666666777788888 8877543
No 245
>3hdg_A Uncharacterized protein; two-component sensor activity, response regulator, PSI-II, 11227F, NYSGXRC, structural genomics; 2.27A {Wolinella succinogenes} SCOP: c.23.1.0
Probab=22.08 E-value=3.1e+02 Score=22.07 Aligned_cols=92 Identities=13% Similarity=0.129 Sum_probs=55.0
Q ss_pred cEEEEEecCcccHHHHHHHHHHcCcEEEEechhHHHHHHCCCeeEEecccCCCCCCCCCcccccccccccccccCCCCHH
Q 007518 76 KQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLENAGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKH 155 (600)
Q Consensus 76 ~rALISVsDK~glv~~Ak~L~~lGfeIiATgGTAk~L~e~GI~v~~VskiTGfPEildGRVKTLHPkIhGGILarr~~~~ 155 (600)
.++||--.|..-...+.+.|.+.|+.+.........++.
T Consensus 8 ~~ilivdd~~~~~~~l~~~L~~~~~~v~~~~~~~~a~~~----------------------------------------- 46 (137)
T 3hdg_A 8 LKILIVEDDTDAREWLSTIISNHFPEVWSAGDGEEGERL----------------------------------------- 46 (137)
T ss_dssp CCEEEECSCHHHHHHHHHHHHTTCSCEEEESSHHHHHHH-----------------------------------------
T ss_pred cEEEEEeCCHHHHHHHHHHHHhcCcEEEEECCHHHHHHH-----------------------------------------
Confidence 356665556666666777777777776655443333332
Q ss_pred hHHHHHHcCCCceeEEEEeccCcHHhhhcCCCCChhhhhhccccchHHHHHHHHHCCCC--EEEEeCCCCHHHHHHHHhC
Q 007518 156 HMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGPAMIRAAAKNHKD--VLVVVGSEDYPALLEFLKG 233 (600)
Q Consensus 156 h~~~l~~~~I~~IDlVVVNLYPFe~tv~~~~~~~~ee~IEnIDIGGpsmiRAAAKN~~~--V~Vv~dP~DY~~vl~eL~~ 233 (600)
+++ .++|+|++++.-- |..|..+++.--+++.+ |.++++..+-+...+.++.
T Consensus 47 ----l~~---~~~dlvi~d~~l~-------------------~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~ 100 (137)
T 3hdg_A 47 ----FGL---HAPDVIITDIRMP-------------------KLGGLEMLDRIKAGGAKPYVIVISAFSEMKYFIKAIEL 100 (137)
T ss_dssp ----HHH---HCCSEEEECSSCS-------------------SSCHHHHHHHHHHTTCCCEEEECCCCCCHHHHHHHHHH
T ss_pred ----Hhc---cCCCEEEEeCCCC-------------------CCCHHHHHHHHHhcCCCCcEEEEecCcChHHHHHHHhC
Confidence 222 2479999987521 12355566655555543 6677777777777666664
Q ss_pred C
Q 007518 234 N 234 (600)
Q Consensus 234 G 234 (600)
|
T Consensus 101 g 101 (137)
T 3hdg_A 101 G 101 (137)
T ss_dssp C
T ss_pred C
Confidence 3
No 246
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=21.99 E-value=65 Score=32.31 Aligned_cols=40 Identities=28% Similarity=0.434 Sum_probs=29.6
Q ss_pred ccchHHHHHHCCCe-EEecCCC-CCCc-hHHHHHHHhcCcEEE
Q 007518 552 WKDAVEEACENGIG-VIAEPGG-SIRD-GDAIDCCNKYGVALL 591 (600)
Q Consensus 552 ~~D~ve~Aa~aGi~-aIIQPGG-SiRD-~evI~aa~e~giaMv 591 (600)
--|.+++|+++|++ .|+-..| +-.| +++.++|.++||.++
T Consensus 84 ~~~~v~ea~~~Gi~~vVi~t~G~~~~~~~~l~~~A~~~gi~vi 126 (297)
T 2yv2_A 84 APDAVYEAVDAGIRLVVVITEGIPVHDTMRFVNYARQKGATII 126 (297)
T ss_dssp HHHHHHHHHHTTCSEEEECCCCCCHHHHHHHHHHHHHHTCEEE
T ss_pred HHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHcCCEEE
Confidence 34899999999999 5554444 3222 389999999999655
No 247
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=21.94 E-value=5.1e+02 Score=24.51 Aligned_cols=32 Identities=19% Similarity=0.229 Sum_probs=25.0
Q ss_pred cEEEEEecCc-ccH-HHHHHHHHHcCcEEEEech
Q 007518 76 KQALISLSDK-KDL-ASLGIGLQELGYTIVSTGG 107 (600)
Q Consensus 76 ~rALISVsDK-~gl-v~~Ak~L~~lGfeIiATgG 107 (600)
+++||+...- .|| ..+|+.|.+.|++++.+.-
T Consensus 22 k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r 55 (285)
T 2p91_A 22 KRALITGVANERSIAYGIAKSFHREGAQLAFTYA 55 (285)
T ss_dssp CEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeC
Confidence 5789988752 444 6789999999999998754
No 248
>3ngf_A AP endonuclease, family 2; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 1.80A {Brucella melitensis biovar abortus} SCOP: c.1.15.0
Probab=21.91 E-value=1e+02 Score=29.07 Aligned_cols=42 Identities=21% Similarity=0.241 Sum_probs=29.9
Q ss_pred chHHHHHHCCCeEEecCCCCCCch---------------HHHHHHHhcCcEEEecCCc
Q 007518 554 DAVEEACENGIGVIAEPGGSIRDG---------------DAIDCCNKYGVALLLTSVR 596 (600)
Q Consensus 554 D~ve~Aa~aGi~aIIQPGGSiRD~---------------evI~aa~e~giaMvfTg~R 596 (600)
..|+.|.+.|++.|+-..| ..+. ++.+.|.++||.+.+=.+-
T Consensus 97 ~~i~~A~~lGa~~v~~~~g-~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~~n 153 (269)
T 3ngf_A 97 IALHYALALDCRTLHAMSG-ITEGLDRKACEETFIENFRYAADKLAPHGITVLVEPLN 153 (269)
T ss_dssp HHHHHHHHTTCCEEECCBC-BCTTSCHHHHHHHHHHHHHHHHHHHGGGTCEEEECCCC
T ss_pred HHHHHHHHcCCCEEEEccC-CCCCCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEeeCC
Confidence 5788999999998877444 2221 3566788999998876533
No 249
>1jr2_A Uroporphyrinogen-III synthase; heme biosynthesis, HEAM biosynthesis, lyase; 1.84A {Homo sapiens} SCOP: c.113.1.1
Probab=21.71 E-value=1.5e+02 Score=28.88 Aligned_cols=21 Identities=19% Similarity=0.370 Sum_probs=17.5
Q ss_pred CcEEEEec-hhHHHHHHCCCee
Q 007518 99 GYTIVSTG-GTATSLENAGVSV 119 (600)
Q Consensus 99 GfeIiATg-GTAk~L~e~GI~v 119 (600)
+..+++-| +|++.|++.|+.+
T Consensus 114 ~~~i~aVG~~Ta~aL~~~G~~~ 135 (286)
T 1jr2_A 114 AKSVYVVGNATASLVSKIGLDT 135 (286)
T ss_dssp HSEEEECSHHHHHHHHHTTCCC
T ss_pred cCcEEEECHHHHHHHHHcCCCc
Confidence 35788864 7999999999987
No 250
>2ob3_A Parathion hydrolase; metalloenzyme, TIM barrel, nerve agents; HET: KCX BTB; 1.04A {Brevundimonas diminuta} PDB: 1psc_A* 1jgm_A* 3cak_A* 1ez2_A* 1eyw_A* 1hzy_A 1i0b_A 1i0d_A 1p6b_A* 1p6c_A* 2oql_A* 2o4q_A* 3cs2_A* 3e3h_A* 1qw7_A* 1dpm_A* 2o4m_A* 1pta_A 3c86_A* 2d2j_A ...
Probab=21.69 E-value=80 Score=31.67 Aligned_cols=40 Identities=18% Similarity=0.165 Sum_probs=30.1
Q ss_pred HHHHHHCCCeEEecCCCC--CCch-HHHHHHHhcCcEEE-ecCC
Q 007518 556 VEEACENGIGVIAEPGGS--IRDG-DAIDCCNKYGVALL-LTSV 595 (600)
Q Consensus 556 ve~Aa~aGi~aIIQPGGS--iRD~-evI~aa~e~giaMv-fTg~ 595 (600)
++.+.++||+.||.+|-. .||- .+++.|+++++.++ -||.
T Consensus 53 l~~~~~aGV~~iv~~~~~~~~~~~~~~~~la~~~~~~i~~~~G~ 96 (330)
T 2ob3_A 53 LRRARAAGVRTIVDVSTFDIGRDVSLLAEVSRAADVHIVAATGL 96 (330)
T ss_dssp HHHHHHTTCCEEEECCCGGGTCCHHHHHHHHHHHTCEEECEEEC
T ss_pred HHHHHHcCCCEEEeCCCCCcCCCHHHHHHHHHHhCCcEEEEecC
Confidence 577899999999999964 4665 57788999986543 3443
No 251
>1vk9_A Conserved hypothetical protein TM1506; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: UNL; 2.70A {Thermotoga maritima} SCOP: c.97.1.3
Probab=21.63 E-value=1.6e+02 Score=27.76 Aligned_cols=91 Identities=12% Similarity=0.058 Sum_probs=63.3
Q ss_pred HHHHHHHHHhcCCCeEEEEccCCcccccccCCHHHHHHHHHhcCCCCcCCCEEEEccccCHHHHHHHhcccCCCCCcccc
Q 007518 332 ADAAWNCVSEFKNPTCVIVKHTNPCGVASRDDILEAYKLAVKADPVSAFGGIVAFNVEVDEALAKELREYRSPTDGETRM 411 (600)
Q Consensus 332 ~daA~~lv~ef~~pa~vivKH~nPCGvA~~~~l~eAy~~A~~~DpvSaFGGIVA~Nr~vD~~tA~~i~~~~~~~~~~~~~ 411 (600)
++.+.+++.+ ..-+||+ +|..-+=-..+.-+..-|.. +..||. +=|-+..-+.|..+.|-.+...
T Consensus 18 ~~~~i~lL~e-~~~ScVv-~~~~~i~ts~~rGv~pL~~l-l~~~~~--L~ga~vADKVVGKAAA~Lmv~g---------- 82 (151)
T 1vk9_A 18 LRSALKIFEK-KDLSLLA-YSGRSIFESKDSGLKPVVEL-FKRFDN--LEGSLVIDKMVGKAAASFLLKM---------- 82 (151)
T ss_dssp HHHHHHHHHH-TTCSEEE-ESSSEEEEECCSTTHHHHHH-HHHCSC--CTTCEEEEEEECHHHHHHHHHH----------
T ss_pred HHHHHHHHHh-CCeeEEE-ecCCEEEEeCCcChHHHHHH-HHhCcC--ccCCEehHHHHhHHHHHHHHhc----------
Confidence 3567777777 5678888 77654555555566666644 345566 5555667789999999987744
Q ss_pred EEEEEEcCCCCHHHHHHHhhccCCceEE
Q 007518 412 FYEIVVAPSYTEEGLEILRGKSKNLRIL 439 (600)
Q Consensus 412 F~EvIIAP~f~~eAleiL~~K~KnlRlL 439 (600)
=+.=|=|.=.|+.|+++|.+. ++++=
T Consensus 83 gV~~VyA~VISe~Al~lL~~~--GI~v~ 108 (151)
T 1vk9_A 83 KPDHIHAKVISKPALKLMNEY--GQSFS 108 (151)
T ss_dssp CCSEEEEEEEEHHHHHHHHHT--TCCEE
T ss_pred ChheehhHHhhHHHHHHHHHc--CCcee
Confidence 244466667799999999988 77643
No 252
>4gpa_A Glutamate receptor 4; PBP fold, ligand-gated ION channel, ION transport, transmembrane AMPA receptor regulating proteins, cornichons, ckamp44; HET: NAG; 2.25A {Rattus norvegicus}
Probab=21.56 E-value=2.8e+02 Score=26.63 Aligned_cols=71 Identities=13% Similarity=0.084 Sum_probs=47.0
Q ss_pred HHHHHHHHHHHcCCc--c--CceEE-eecccccCCccchHHHH------HHCCCeEEecCCCCCCchHHHHHHHhcCcEE
Q 007518 522 RRESLRIAMKKAGDE--V--KGAAL-ASDAFFPFAWKDAVEEA------CENGIGVIAEPGGSIRDGDAIDCCNKYGVAL 590 (600)
Q Consensus 522 RVds~~iA~~kA~~~--~--~Gavl-ASDAFFPF~~~D~ve~A------a~aGi~aIIQPGGSiRD~evI~aa~e~giaM 590 (600)
...++++|++....+ + .+.-| .-|---.-. |++..+ .+.||.+||=|..|---.-+...|++.+|+|
T Consensus 19 ~~~a~~~Av~~iN~~~~ilg~~~~l~~~~~~~~~~--~~~~~~~~~~~l~~~~V~aiiG~~~S~~~~~v~~i~~~~~ip~ 96 (389)
T 4gpa_A 19 EYTAFRLAIFLHNTSPNASEAPFNLVPHVDNIETA--NSFAVTNAFCSQYSRGVFAIFGLYDKRSVHTLTSFCSALHISL 96 (389)
T ss_dssp HHHHHHHHHHHHHTCSCTTTCSSEEEEEEEECSSC--CHHHHHHHHHHHHHTTCSEEEECCCTTTHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHHHHhCCCCCCCCEEEEEEEecCCCc--hHHHHHHHHHHHHhcCCEEEEeCCccHHHHHHHHHHHHhCCCc
Confidence 446788999886432 2 22222 222221223 554433 2479999999999988888899999999999
Q ss_pred EecC
Q 007518 591 LLTS 594 (600)
Q Consensus 591 vfTg 594 (600)
+-++
T Consensus 97 is~~ 100 (389)
T 4gpa_A 97 ITPS 100 (389)
T ss_dssp EECS
T ss_pred eecc
Confidence 9765
No 253
>3bdk_A D-mannonate dehydratase; xylose isomerase-like TIM barrel, lyase; HET: DNO; 2.50A {Streptococcus suis} PDB: 3ban_A* 3dbn_A* 3fvm_A
Probab=21.39 E-value=56 Score=34.35 Aligned_cols=17 Identities=12% Similarity=0.266 Sum_probs=14.7
Q ss_pred hHHHHHHHhcCcEEEec
Q 007518 577 GDAIDCCNKYGVALLLT 593 (600)
Q Consensus 577 ~evI~aa~e~giaMvfT 593 (600)
+++++.|.|+||.|.+=
T Consensus 203 ~~i~~~Aee~GV~Laie 219 (386)
T 3bdk_A 203 KAILPTAEEAGVKMAIH 219 (386)
T ss_dssp HHHHHHHHSSSCEEEEC
T ss_pred HHHHHHHHHhCCEEEEe
Confidence 57889999999999874
No 254
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=21.33 E-value=72 Score=31.76 Aligned_cols=48 Identities=8% Similarity=0.093 Sum_probs=34.5
Q ss_pred cccccCCccchHHHHHHCCCeEEecCCCCCC-chHHHHHHHhcCcEEEe
Q 007518 545 DAFFPFAWKDAVEEACENGIGVIAEPGGSIR-DGDAIDCCNKYGVALLL 592 (600)
Q Consensus 545 DAFFPF~~~D~ve~Aa~aGi~aIIQPGGSiR-D~evI~aa~e~giaMvf 592 (600)
+.+|-+....-++.++++|+..+|-|.--.. .++.+++|++||+.+++
T Consensus 101 n~v~~~g~~~f~~~~~~aG~dGviv~Dl~~ee~~~~~~~~~~~gl~~i~ 149 (271)
T 1ujp_A 101 NPVLAWGPERFFGLFKQAGATGVILPDLPPDEDPGLVRLAQEIGLETVF 149 (271)
T ss_dssp HHHHHHCHHHHHHHHHHHTCCEEECTTCCGGGCHHHHHHHHHHTCEEEC
T ss_pred cHHHHhhHHHHHHHHHHcCCCEEEecCCCHHHHHHHHHHHHHcCCceEE
Confidence 4445223226778899999999999887653 34788899999987665
No 255
>3zzm_A Bifunctional purine biosynthesis protein PURH; transferase, hydrolase; HET: JLN; 2.20A {Mycobacterium tuberculosis} PDB: 4a1o_A*
Probab=21.21 E-value=1.6e+02 Score=32.60 Aligned_cols=112 Identities=21% Similarity=0.234 Sum_probs=73.9
Q ss_pred ccceeecCCCCCHHHHHHHHHHHHHHhhhcceEEEEEeCCeEEEecC-CCCcHHHHHHHHHHHcC--Cc--cCceEEe-e
Q 007518 471 IQFKVVSEKKPQESELHDAEFAWLCVKHVKSNAIVIAKNNCMLGMGS-GQPNRRESLRIAMKKAG--DE--VKGAALA-S 544 (600)
Q Consensus 471 ~~~~vVT~~~Pt~~e~~dL~FAwkvvKhvKSNAIV~ak~~~tvGiGa-GQ~sRVds~~iA~~kA~--~~--~~GavlA-S 544 (600)
..+++.-.++++---+-|+.-||++++-..-+|.|+.|...--|++. |. .+..|-.||- |. .=|.++| +
T Consensus 246 ~~~~qL~GKeLSYnNl~DadaA~~lv~ef~~Pa~aivKH~nPCGvA~~g~-----~l~~Ay~~A~~~Dp~SaFGgiiA~N 320 (523)
T 3zzm_A 246 AQAEQLHGKDMSYNNFTDADAAWRAAFDHEQTCVAIIKHANPCGIAISSV-----SVADAHRKAHECDPLSAYGGVIAAN 320 (523)
T ss_dssp GGCEEEESSCCCHHHHHHHHHHHHHHTTSSSEEEEEEETTEEEEEEEESS-----CHHHHHHHHHTTSHHHHTTEEEEES
T ss_pred ccceeccCCCCCcccHHhHHHHHHHHHhcCCCeEEEEecCCcceeecCCC-----CHHHHHHHHHhcCCccccCCEEEEc
Confidence 46788888888999999999999999999999999999998888887 64 4567777773 32 2244444 3
Q ss_pred cccccCCccchHHHHHHCCCeEEecCCCCCCchHHHHHHHhcCcEEEec
Q 007518 545 DAFFPFAWKDAVEEACENGIGVIAEPGGSIRDGDAIDCCNKYGVALLLT 593 (600)
Q Consensus 545 DAFFPF~~~D~ve~Aa~aGi~aIIQPGGSiRD~evI~aa~e~giaMvfT 593 (600)
+. .. .+.-+...+.=...||.||=+ ++-+==...+.|+-++-.
T Consensus 321 ~~---vD-~~tA~~i~~~f~EvviAP~~~--~eAleiL~~KKnlR~l~~ 363 (523)
T 3zzm_A 321 TE---VS-VEMAEYVSTIFTEVIVAPGYA--PGALDVLARKKNIRVLVA 363 (523)
T ss_dssp SC---BC-HHHHHHHTTSCEEEEEESCBC--TTHHHHHTTSSSCEEEEC
T ss_pred Cc---cC-HHHHHHHhhhEEEEEEcCCCC--HHHHHHHHhCCCeEEEEe
Confidence 32 22 133334444456778888765 332111234445555543
No 256
>3l7o_A Ribose-5-phosphate isomerase A; RPIA; 1.70A {Streptococcus mutans}
Probab=21.04 E-value=90 Score=30.70 Aligned_cols=33 Identities=12% Similarity=0.167 Sum_probs=25.1
Q ss_pred HHHHHHHhhhcceEEEEEeCCeEEEecCCCCcHHHHHHHHH
Q 007518 490 EFAWLCVKHVKSNAIVIAKNNCMLGMGSGQPNRRESLRIAM 530 (600)
Q Consensus 490 ~FAwkvvKhvKSNAIV~ak~~~tvGiGaGQ~sRVds~~iA~ 530 (600)
.-|+++++|++ +|++||+|+|.|..--.-+++-
T Consensus 7 ~iA~~A~~~V~--------dg~vIgLGsGST~~~~i~~L~~ 39 (225)
T 3l7o_A 7 IAGVRAAQYVE--------DGMIVGLGTGSTAYYFVEEVGR 39 (225)
T ss_dssp HHHHHHHTTCC--------TTCEEEECCSTTHHHHHHHHHH
T ss_pred HHHHHHHHhCC--------CCCEEEECCcHHHHHHHHHHHH
Confidence 56888888875 7999999999887754444443
No 257
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=20.92 E-value=75 Score=31.58 Aligned_cols=39 Identities=13% Similarity=0.246 Sum_probs=26.2
Q ss_pred chHHHHHHCCCeEEe-----cCCCCCCc----hHHHHHHHhcCcEEEe
Q 007518 554 DAVEEACENGIGVIA-----EPGGSIRD----GDAIDCCNKYGVALLL 592 (600)
Q Consensus 554 D~ve~Aa~aGi~aII-----QPGGSiRD----~evI~aa~e~giaMvf 592 (600)
|.++.+.+..+++|+ -|.|.+-+ +++.+.|+++|+.++.
T Consensus 151 ~~l~~~l~~~~~~v~l~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~ 198 (411)
T 2o0r_A 151 DALRRAVTPRTRALIINSPHNPTGAVLSATELAAIAEIAVAANLVVIT 198 (411)
T ss_dssp HHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHhhccCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 444444444455555 47888766 5888999999988774
No 258
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=20.80 E-value=1e+02 Score=27.89 Aligned_cols=48 Identities=15% Similarity=0.167 Sum_probs=28.8
Q ss_pred CCceeEEEEeccCcHHhhhcCCCCChhhhhhccccchH-HHHHHHHHCC-CCEEEEeCCCCH
Q 007518 165 IGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGP-AMIRAAAKNH-KDVLVVVGSEDY 224 (600)
Q Consensus 165 I~~IDlVVVNLYPFe~tv~~~~~~~~ee~IEnIDIGGp-smiRAAAKN~-~~V~Vv~dP~DY 224 (600)
+..+|.||.|.-+.... ..++++-|. .+++++.++- +++..+++..-|
T Consensus 61 ~~~~d~vi~~ag~~~~~------------~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~ 110 (219)
T 3dqp_A 61 LHGMDAIINVSGSGGKS------------LLKVDLYGAVKLMQAAEKAEVKRFILLSTIFSL 110 (219)
T ss_dssp TTTCSEEEECCCCTTSS------------CCCCCCHHHHHHHHHHHHTTCCEEEEECCTTTT
T ss_pred HcCCCEEEECCcCCCCC------------cEeEeHHHHHHHHHHHHHhCCCEEEEECccccc
Confidence 45799999887655321 333455444 5677776654 566666665443
No 259
>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}
Probab=20.72 E-value=2.1e+02 Score=26.71 Aligned_cols=110 Identities=11% Similarity=0.023 Sum_probs=57.3
Q ss_pred cEEEEEecCcccHHHHHHHHHHcCcEEEEechhHHHHHHCCCeeEEecccCCCCCCCCCcccccccccccccccCCCCHH
Q 007518 76 KQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLENAGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKH 155 (600)
Q Consensus 76 ~rALISVsDK~glv~~Ak~L~~lGfeIiATgGTAk~L~e~GI~v~~VskiTGfPEildGRVKTLHPkIhGGILarr~~~~ 155 (600)
+++||+...--=--.+++.|.+.|++++...-+.. ..+..++. ++-|=| .+++
T Consensus 3 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~-------------------~~~~~~~~-----~~~~Dl---~d~~ 55 (267)
T 3ay3_A 3 NRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDL-------------------GAAEAHEE-----IVACDL---ADAQ 55 (267)
T ss_dssp EEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCC-------------------CCCCTTEE-----ECCCCT---TCHH
T ss_pred ceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCc-------------------cccCCCcc-----EEEccC---CCHH
Confidence 46777665221113566777778888777643110 00111221 111222 2344
Q ss_pred hHHHHHHcCCCceeEEEEeccCcHHhhhcCCCCChhhhhhccccch-HHHHHHHHHC-CCCEEEEeCCCCH
Q 007518 156 HMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGG-PAMIRAAAKN-HKDVLVVVGSEDY 224 (600)
Q Consensus 156 h~~~l~~~~I~~IDlVVVNLYPFe~tv~~~~~~~~ee~IEnIDIGG-psmiRAAAKN-~~~V~Vv~dP~DY 224 (600)
.+.++- ..+|.||.|.-+. . ..++++.++ +.+-| -.+++++.++ .++++.+++..-|
T Consensus 56 ~~~~~~----~~~d~vi~~a~~~-----~--~~~~~~~~~-~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~ 114 (267)
T 3ay3_A 56 AVHDLV----KDCDGIIHLGGVS-----V--ERPWNDILQ-ANIIGAYNLYEAARNLGKPRIVFASSNHTI 114 (267)
T ss_dssp HHHHHH----TTCSEEEECCSCC-----S--CCCHHHHHH-HTHHHHHHHHHHHHHTTCCEEEEEEEGGGS
T ss_pred HHHHHH----cCCCEEEECCcCC-----C--CCCHHHHHH-HHHHHHHHHHHHHHHhCCCEEEEeCCHHHh
Confidence 454443 2589999887654 1 224454444 44444 5788888775 4577777765444
No 260
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=20.70 E-value=3.8e+02 Score=22.47 Aligned_cols=107 Identities=12% Similarity=0.062 Sum_probs=62.4
Q ss_pred CcEEEEEecCcccHHHHHHHHHHcCcEEEEechhHHH---HHHCCCeeEEecccCCCCCCCCCcccccccccccccccCC
Q 007518 75 NKQALISLSDKKDLASLGIGLQELGYTIVSTGGTATS---LENAGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARR 151 (600)
Q Consensus 75 i~rALISVsDK~glv~~Ak~L~~lGfeIiATgGTAk~---L~e~GI~v~~VskiTGfPEildGRVKTLHPkIhGGILarr 151 (600)
+++++|-..-.-| ..+|+.|.+.|++++...-..+. +++.|+.+. +|
T Consensus 6 ~~~v~I~G~G~iG-~~la~~L~~~g~~V~~id~~~~~~~~~~~~~~~~~-----------------------~g------ 55 (141)
T 3llv_A 6 RYEYIVIGSEAAG-VGLVRELTAAGKKVLAVDKSKEKIELLEDEGFDAV-----------------------IA------ 55 (141)
T ss_dssp CCSEEEECCSHHH-HHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEE-----------------------EC------
T ss_pred CCEEEEECCCHHH-HHHHHHHHHCCCeEEEEECCHHHHHHHHHCCCcEE-----------------------EC------
Confidence 3467776665544 46888999999988887554443 444443221 11
Q ss_pred CCHHhHHHHHHcCCCceeEEEEeccCcHHhhhcCCCCChhhhhhccccchHHHHHHHHHCCCCEEEEeCCCCHHHHHHHH
Q 007518 152 DQKHHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGPAMIRAAAKNHKDVLVVVGSEDYPALLEFL 231 (600)
Q Consensus 152 ~~~~h~~~l~~~~I~~IDlVVVNLYPFe~tv~~~~~~~~ee~IEnIDIGGpsmiRAAAKN~~~V~Vv~dP~DY~~vl~eL 231 (600)
+..+.+.+++.++...|+||+..-..+..+. -..++|.. |..++.+.+.-.+|...++++
T Consensus 56 -d~~~~~~l~~~~~~~~d~vi~~~~~~~~n~~-----------------~~~~a~~~--~~~~iia~~~~~~~~~~l~~~ 115 (141)
T 3llv_A 56 -DPTDESFYRSLDLEGVSAVLITGSDDEFNLK-----------------ILKALRSV--SDVYAIVRVSSPKKKEEFEEA 115 (141)
T ss_dssp -CTTCHHHHHHSCCTTCSEEEECCSCHHHHHH-----------------HHHHHHHH--CCCCEEEEESCGGGHHHHHHT
T ss_pred -CCCCHHHHHhCCcccCCEEEEecCCHHHHHH-----------------HHHHHHHh--CCceEEEEEcChhHHHHHHHc
Confidence 1122345677799999999976543332211 11123332 356677777777777777666
No 261
>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}
Probab=20.65 E-value=4.9e+02 Score=23.80 Aligned_cols=30 Identities=17% Similarity=0.101 Sum_probs=23.9
Q ss_pred cEEEEEecCcccHHHHHHHHHHcCcEEEEe
Q 007518 76 KQALISLSDKKDLASLGIGLQELGYTIVST 105 (600)
Q Consensus 76 ~rALISVsDK~glv~~Ak~L~~lGfeIiAT 105 (600)
+++||+....-==..+|+.|.+.|+.++.+
T Consensus 8 k~vlITGas~gIG~~~a~~l~~~G~~v~~~ 37 (255)
T 3icc_A 8 KVALVTGASRGIGRAIAKRLANDGALVAIH 37 (255)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCeEEEE
Confidence 578988876433368999999999999875
No 262
>2rbg_A Putative uncharacterized protein ST0493; hypothetical protein, structural genomics, unknown function, NPPSFA; 1.75A {Sulfolobus tokodaii}
Probab=20.44 E-value=82 Score=28.70 Aligned_cols=41 Identities=27% Similarity=0.218 Sum_probs=31.0
Q ss_pred HHHHHHcCCCceeEEEEeccCcHHhhhcCCCCChhhhhhccccch
Q 007518 157 MDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGG 201 (600)
Q Consensus 157 ~~~l~~~~I~~IDlVVVNLYPFe~tv~~~~~~~~ee~IEnIDIGG 201 (600)
+.+.+..|-..+=+=|+-=-||.+-++. --|.+++|||+|=
T Consensus 25 fkD~R~~GskKvviNvis~~~y~e~v~~----~REAiLDNIDlG~ 65 (126)
T 2rbg_A 25 FLDVRSSGSKKTTINVFTEIQYQELVTL----IREALLENIDIGY 65 (126)
T ss_dssp HHHHHHHTCSEEEEEEECSSCHHHHHHH----THHHHHHTTTSEE
T ss_pred HHHHHhcCCceEEEEEecCCcHHHHHHH----HHHHHHhccccce
Confidence 4567778887766656666789998875 2588999999993
No 263
>4evq_A Putative ABC transporter subunit, substrate-bindi component; structural genomics, PSI-biology, midwest center for structu genomics; HET: MSE PHB; 1.40A {Rhodopseudomonas palustris} PDB: 4evr_A
Probab=20.42 E-value=36 Score=33.00 Aligned_cols=72 Identities=11% Similarity=0.130 Sum_probs=44.8
Q ss_pred HHHHHHHHHHcCCccCc----eEEeecccccCCccchHHHHHH-CCCeEEecCCCCCCchHHHHHHHhcCcEEEecC
Q 007518 523 RESLRIAMKKAGDEVKG----AALASDAFFPFAWKDAVEEACE-NGIGVIAEPGGSIRDGDAIDCCNKYGVALLLTS 594 (600)
Q Consensus 523 Vds~~iA~~kA~~~~~G----avlASDAFFPF~~~D~ve~Aa~-aGi~aIIQPGGSiRD~evI~aa~e~giaMvfTg 594 (600)
..+++.|+++.+..+.| .++..|..=|-..-..++.+.+ .+|.+||-|.+|-....+.+.+++++|+||..+
T Consensus 37 ~~g~~~a~~~~ng~~~g~~~~l~~~d~~~~~~~~~~~~~~l~~~~~v~~iig~~~s~~~~~~~~~~~~~~iP~v~~~ 113 (375)
T 4evq_A 37 TRGLELYVQSQGGKLGGRSISFVKVDDESAPPKATELTTKLIQSEKADVLIGTVHSGVAMAMVKIAREDGIPTIVPN 113 (375)
T ss_dssp HHHHHHHHHHTTTEETTEEEEEEEEECTTCHHHHHHHHHCCCCCSCCSEEEECSSHHHHHHHHHHHHHHCCCEEESS
T ss_pred HHHHHHHHHHhCCCcCCEEEEEEEecCCCCHHHHHHHHHHHHhcCCceEEEcCCccHHHHHHHHHHHHcCceEEecC
Confidence 45667777776522222 2333333222211112233334 499999999998777889999999999999764
No 264
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=20.37 E-value=2e+02 Score=27.26 Aligned_cols=31 Identities=13% Similarity=0.139 Sum_probs=20.8
Q ss_pred cEEEEEecCcccHHHHHHHHHHcCcEEEEec
Q 007518 76 KQALISLSDKKDLASLGIGLQELGYTIVSTG 106 (600)
Q Consensus 76 ~rALISVsDK~glv~~Ak~L~~lGfeIiATg 106 (600)
+++||+...--=--.+++.|.+.|++++++.
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~ 33 (315)
T 2ydy_A 3 RRVLVTGATGLLGRAVHKEFQQNNWHAVGCG 33 (315)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEC
T ss_pred CeEEEECCCcHHHHHHHHHHHhCCCeEEEEc
Confidence 4677776521112367788888899888875
No 265
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=20.19 E-value=3.5e+02 Score=25.36 Aligned_cols=32 Identities=13% Similarity=0.124 Sum_probs=24.5
Q ss_pred cEEEEEecCc-ccH-HHHHHHHHHcCcEEEEech
Q 007518 76 KQALISLSDK-KDL-ASLGIGLQELGYTIVSTGG 107 (600)
Q Consensus 76 ~rALISVsDK-~gl-v~~Ak~L~~lGfeIiATgG 107 (600)
+++||+-... .+| ..+|+.|.+.|++++.+.-
T Consensus 10 k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r 43 (265)
T 1qsg_A 10 KRILVTGVASKLSIAYGIAQAMHREGAELAFTYQ 43 (265)
T ss_dssp CEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcC
Confidence 5688888642 344 5788999999999998754
No 266
>3g8q_A Predicted RNA-binding protein, contains thump domain; cytidine deaminase, ferredoxin-like domain; 2.40A {Methanopyrus kandleri}
Probab=20.17 E-value=1.1e+02 Score=31.14 Aligned_cols=92 Identities=13% Similarity=0.135 Sum_probs=63.2
Q ss_pred HHHHHHhhhcceEEEEEeCCeEEEecCCCCcHHHHHHHHHHHcCCccCceEEeecccccCCccchHHHHHHCCCeEEecC
Q 007518 491 FAWLCVKHVKSNAIVIAKNNCMLGMGSGQPNRRESLRIAMKKAGDEVKGAALASDAFFPFAWKDAVEEACENGIGVIAEP 570 (600)
Q Consensus 491 FAwkvvKhvKSNAIV~ak~~~tvGiGaGQ~sRVds~~iA~~kA~~~~~GavlASDAFFPF~~~D~ve~Aa~aGi~aIIQP 570 (600)
-+|...-...=-|+ +++||+.||.| +....+|-..|+. +..++|+.|-. -..|=. -|......+||+.|+=-
T Consensus 14 k~~~t~PNPpVGAV-IVkDGeIIA~G--e~gTaHAEInAIr--g~~L~GaTLYV-TLEPC~--MCAgAII~AGIkRVVYG 85 (278)
T 3g8q_A 14 KILNEIPKRTVTAA-LLEGGEIVAVE--EADDEHAERKLVR--RHDVEGKVVFV-TARPCL--YCARELAEAGVAGVVYL 85 (278)
T ss_dssp HHHHHSCCSSCEEE-EEETTEEEEEE--ECSSSCHHHHHHH--HSCCTTCEEEE-SSCCCH--HHHHHHHTTTCCEEEEE
T ss_pred HHhccCCCCCEEEE-EEECCEEEEec--CCCCCCHHHHHhC--CCCCCCcEEEE-eCCchH--HHHHHHHHhCCCEEEEE
Confidence 34443333333354 55899999999 5566677777887 56788888766 467888 89999999999988854
Q ss_pred CCCCCchHHHHHHHhcCcEEEe
Q 007518 571 GGSIRDGDAIDCCNKYGVALLL 592 (600)
Q Consensus 571 GGSiRD~evI~aa~e~giaMvf 592 (600)
. +- +..-++.-.++||.+..
T Consensus 86 a-~~-~G~G~e~LreAGIEV~~ 105 (278)
T 3g8q_A 86 G-RG-RGLGPYYLARSGVEVVE 105 (278)
T ss_dssp E-CS-SCCHHHHHHTTTCEEEE
T ss_pred e-cC-CChhHHHHHHCCCEEEE
Confidence 3 22 22345778888887654
No 267
>2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A*
Probab=20.04 E-value=4.5e+02 Score=23.16 Aligned_cols=22 Identities=27% Similarity=0.366 Sum_probs=17.4
Q ss_pred ccHHHHHHHHHHcCcEEE-Eech
Q 007518 86 KDLASLGIGLQELGYTIV-STGG 107 (600)
Q Consensus 86 ~glv~~Ak~L~~lGfeIi-ATgG 107 (600)
.++.++.+.|.+.|+.+. .|++
T Consensus 45 pg~~e~L~~L~~~G~~l~i~Tn~ 67 (176)
T 2fpr_A 45 PGVIPQLLKLQKAGYKLVMITNQ 67 (176)
T ss_dssp TTHHHHHHHHHHTTEEEEEEEEC
T ss_pred ccHHHHHHHHHHCCCEEEEEECC
Confidence 688999999999998864 5554
Done!