Your job contains 1 sequence.
>007527
MDTTKIQNQKRVPESLKKQLALAVRSIQWSYAIFWTISDTQPGVLEWGDGYYNGDIKTRK
TIQSVELSSNQLGLQRSEQLRELYESLSAGESNPQAASKRPSAALSPEDLTDTEWYYLVC
MSFVFNIGEGLPGRALANNQPIWLCNAQYADSKVFSRSLLAKTVVCFPHLHGVVELGVTE
LVLEEPGFIQHIKTSFMEIPCPMISGNSSSGAGNMRDDKDLACAALCSQNLDTTMVPVVG
YEVLEMASPDNNGSSGIKHNQPADDSFMVEGINGVASQVQSWQFMDDEFSNCVHSVNSSD
SISQTLVDAAKCVSASKDDKKIGHCLQEVEECNPTELTSLDPQGHDLHYQSVLSSLLKTS
HQLVSRPHFQNHSQESSFASWKKGGLVSCKKQRDGVSQKLLKKILFEVPRIINYRLLESS
EDNHIKDDVSRLEAEETATNHVKSERRQRGKLNERFVILKSMVPSVSKFDKVSILDDTIE
YVQELERKVKELESCRAKLEANYDNSKTSRAKKRKSRDIYESEPEFERFATADNINVSIN
EKDVQIEIKCPWREGMLLEIMDAISNLHLYSHRFNHPPIEAFYLLLSKVSTEDQMPHQLG
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 007527
(600 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:504954829 - symbol:GL3 "AT5G41315" species:370... 1163 4.2e-118 1
TAIR|locus:2026629 - symbol:EGL3 "AT1G63650" species:3702... 962 8.4e-97 1
UNIPROTKB|Q7XPS7 - symbol:OSJNBa0065O17.4 "OSJNBa0065O17.... 500 4.2e-71 2
TAIR|locus:2118524 - symbol:TT8 "AT4G09820" species:3702 ... 422 5.1e-68 3
UNIPROTKB|Q948Y2 - symbol:Plw-OSB2 "R-type basic helix-lo... 496 3.3e-65 2
TAIR|locus:2127023 - symbol:ATMYC1 species:3702 "Arabidop... 480 1.0e-45 1
TAIR|locus:2178555 - symbol:MYC3 "AT5G46760" species:3702... 195 8.6e-27 2
UNIPROTKB|Q336P5 - symbol:Os10g0575000 "Os10g0575000 prot... 205 3.8e-25 2
TAIR|locus:2039094 - symbol:AIB "AT2G46510" species:3702 ... 194 7.3e-25 2
TAIR|locus:2141055 - symbol:MYC4 "AT4G17880" species:3702... 181 2.7e-24 2
TAIR|locus:2035237 - symbol:AT1G01260 "AT1G01260" species... 177 1.7e-23 3
TAIR|locus:2035609 - symbol:MYC2 "AT1G32640" species:3702... 186 2.6e-23 2
TAIR|locus:2172932 - symbol:NIG1 "AT5G46830" species:3702... 176 1.1e-22 2
UNIPROTKB|Q53L62 - symbol:LOC_Os11g15210 "Helix-loop-heli... 220 1.7e-17 2
UNIPROTKB|Q657A4 - symbol:P0022F12.30 "Regulatory protein... 231 7.3e-17 2
TAIR|locus:2130619 - symbol:AT4G16430 "AT4G16430" species... 158 2.3e-14 2
TAIR|locus:2137574 - symbol:AT4G37850 "AT4G37850" species... 180 5.1e-11 1
TAIR|locus:2062225 - symbol:AT2G22750 "AT2G22750" species... 178 6.3e-11 1
UNIPROTKB|Q75GI1 - symbol:OSJNBa0013A09.16 "Putative tran... 170 9.3e-10 1
TAIR|locus:2155725 - symbol:bHLH093 "AT5G65640" species:3... 167 1.9e-09 1
TAIR|locus:2046198 - symbol:FRU "AT2G28160" species:3702 ... 162 5.2e-09 1
TAIR|locus:2134583 - symbol:AT4G00870 "AT4G00870" species... 145 6.1e-09 2
UNIPROTKB|Q2QLR0 - symbol:LOC_Os12g43620 "Helix-loop-heli... 162 6.3e-09 1
TAIR|locus:2062235 - symbol:NAI1 "AT2G22770" species:3702... 161 6.9e-09 1
UNIPROTKB|Q8LSP3 - symbol:OJ1203D03.3 "Helix-loop-helix D... 164 7.4e-09 1
UNIPROTKB|Q84R79 - symbol:OSJNBb0113I20.1 "Putative ammon... 159 9.5e-09 1
UNIPROTKB|Q8H8E4 - symbol:OJ1006F06.1 "Putative bHLH tran... 161 1.4e-08 1
TAIR|locus:2062230 - symbol:AT2G22760 "AT2G22760" species... 154 3.3e-08 1
UNIPROTKB|Q6ZBI4 - symbol:P0623F08.11 "Phaseolin G-box bi... 149 5.4e-08 2
TAIR|locus:2090847 - symbol:ICE1 "AT3G26744" species:3702... 136 1.4e-07 3
TAIR|locus:2142419 - symbol:AT5G10570 "AT5G10570" species... 147 2.5e-07 1
TAIR|locus:2123954 - symbol:AT4G29930 "AT4G29930" species... 143 4.1e-07 1
UNIPROTKB|Q84R60 - symbol:OSJNBb0113I20.8 "Putative ammon... 146 4.3e-07 1
UNIPROTKB|Q2R3F6 - symbol:Os11g0523700 "Helix-loop-helix ... 149 6.6e-07 2
TAIR|locus:2039445 - symbol:AMS "AT2G16910" species:3702 ... 143 1.5e-06 3
UNIPROTKB|Q69IU0 - symbol:P0498F03.15 "Putative MYC-relat... 139 1.5e-06 1
TAIR|locus:2163163 - symbol:PIF7 "AT5G61270" species:3702... 138 1.9e-06 2
UNIPROTKB|Q336V8 - symbol:Os10g0544200 "Os10g0544200 prot... 138 3.9e-06 1
UNIPROTKB|Q5SMX4 - symbol:P0498B01.36 "cDNA clone:J033115... 139 3.9e-06 1
UNIPROTKB|Q5SMX2 - symbol:P0498B01.25 "Basic helix-loop-h... 138 4.5e-06 1
TAIR|locus:2155503 - symbol:ALC "AT5G67110" species:3702 ... 130 4.8e-06 1
UNIPROTKB|Q6YUS3 - symbol:OSJNBb0088N06.15 "BHLH protein-... 133 6.4e-06 2
UNIPROTKB|Q8S0C6 - symbol:B1112D09.6 "Uncharacterized pro... 137 7.0e-06 1
TAIR|locus:2141206 - symbol:DYT1 "AT4G21330" species:3702... 128 7.9e-06 1
UNIPROTKB|Q948F6 - symbol:OSJNBa0049O12.18 "Putative SPAT... 131 1.4e-05 1
UNIPROTKB|Q84LF9 - symbol:RERJ1 "Transcription Factor" sp... 130 1.5e-05 2
TAIR|locus:2126876 - symbol:UNE10 "AT4G00050" species:370... 131 2.5e-05 2
TAIR|locus:504956068 - symbol:AT2G31215 "AT2G31215" speci... 109 2.6e-05 1
TAIR|locus:2020003 - symbol:AT1G10610 "AT1G10610" species... 121 3.6e-05 3
TAIR|locus:2042556 - symbol:AT2G31210 "AT2G31210" species... 130 3.7e-05 1
TAIR|locus:2117788 - symbol:AT4G28800 species:3702 "Arabi... 130 3.9e-05 1
TAIR|locus:2009537 - symbol:AT1G22490 "AT1G22490" species... 126 5.2e-05 1
UNIPROTKB|Q5VRS4 - symbol:OSJNBa0015I14.14 "Basic helix-l... 126 5.7e-05 1
UNIPROTKB|Q84LH4 - symbol:OSJNBb0011H13.2 "Putative Helix... 126 6.2e-05 1
UNIPROTKB|Q7XKP5 - symbol:OSJNBb0013O03.11 "OSJNBb0013O03... 111 8.0e-05 2
UNIPROTKB|Q84T08 - symbol:OSJNBa0087C10.10 "BHLH transcri... 123 8.1e-05 1
TAIR|locus:4010713915 - symbol:AT4G28811 species:3702 "Ar... 128 8.9e-05 1
TAIR|locus:4010713916 - symbol:AT4G28815 species:3702 "Ar... 124 8.9e-05 1
UNIPROTKB|Q58GE3 - symbol:UDT1 "Undeveloped tapetum 1" sp... 121 9.4e-05 1
TAIR|locus:2079512 - symbol:AT3G61950 "AT3G61950" species... 125 9.5e-05 1
UNIPROTKB|Q7FA23 - symbol:OSJNBa0058K23.6 "Os04g0618600 p... 116 0.00011 1
TAIR|locus:2205455 - symbol:BIM2 "AT1G69010" species:3702... 123 0.00012 1
UNIPROTKB|Q6ZGS3 - symbol:OJ1148_D05.9 "Putative basic-he... 122 0.00022 1
TAIR|locus:2085964 - symbol:BHLH32 "AT3G25710" species:37... 121 0.00024 1
UNIPROTKB|Q5NAE0 - symbol:P0498A12.33 "Putative BP-5 prot... 124 0.00026 1
TAIR|locus:2042486 - symbol:AT2G31220 "AT2G31220" species... 121 0.00040 1
UNIPROTKB|Q8GRJ1 - symbol:OJ1343_B12.103 "Transcription f... 120 0.00044 1
UNIPROTKB|Q6YTU1 - symbol:P0419H09.4 "cDNA clone:002-131-... 119 0.00045 1
TAIR|locus:2115080 - symbol:SPT "AT4G36930" species:3702 ... 123 0.00049 2
TAIR|locus:2168235 - symbol:AT5G65320 "AT5G65320" species... 116 0.00064 1
TAIR|locus:2155543 - symbol:HEC1 "HECATE 1" species:3702 ... 114 0.00066 1
TAIR|locus:2065086 - symbol:AT2G40200 "AT2G40200" species... 114 0.00076 1
TAIR|locus:2012345 - symbol:PIF3 "AT1G09530" species:3702... 119 0.00081 1
UNIPROTKB|Q69JI7 - symbol:OSJNBa0026C08.39-1 "BHLH protei... 116 0.00086 2
TAIR|locus:2117773 - symbol:AT4G28790 species:3702 "Arabi... 122 0.00088 2
UNIPROTKB|Q7XLY9 - symbol:OSJNBa0086O06.20 "OSJNBa0086O06... 116 0.00095 1
UNIPROTKB|Q6ESL3 - symbol:OJ1294_G06.8 "DNA binding prote... 116 0.00096 1
>TAIR|locus:504954829 [details] [associations]
symbol:GL3 "AT5G41315" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS;NAS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0010091 "trichome branching" evidence=IMP]
[GO:0001708 "cell fate specification" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0009957 "epidermal cell fate
specification" evidence=IMP] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610 Pfam:PF14215
GO:GO:0010091 HSSP:P61244 EMBL:AB006707 eggNOG:NOG320411
HOGENOM:HOG000237985 ProtClustDB:CLSN2682588 GO:GO:0009957
EMBL:AF246291 IPI:IPI00543830 RefSeq:NP_680372.1 UniGene:At.27204
ProteinModelPortal:Q9FN69 SMR:Q9FN69 IntAct:Q9FN69 STRING:Q9FN69
EnsemblPlants:AT5G41315.1 GeneID:834133 KEGG:ath:AT5G41315
TAIR:At5g41315 InParanoid:Q9FN69 OMA:ERTSANC PhylomeDB:Q9FN69
Genevestigator:Q9FN69 Uniprot:Q9FN69
Length = 637
Score = 1163 (414.5 bits), Expect = 4.2e-118, P = 4.2e-118
Identities = 261/512 (50%), Positives = 328/512 (64%)
Query: 7 QNQKRVPESLKKQLALAVRSIQWSYAIFWTISDTQPGVLEWGDGYYNGDIKTRKTIQSVE 66
QN+ VPE+LKK LA++VR+IQWSY IFW++S +Q GVLEWGDGYYNGDIKTRKTIQ+ E
Sbjct: 5 QNRTTVPENLKKHLAVSVRNIQWSYGIFWSVSASQSGVLEWGDGYYNGDIKTRKTIQASE 64
Query: 67 LSSNQLGLQRSEQLRELYESLSAGESNPQ--AA----SKRPSAA-LSPEDLTDTEWYYLV 119
+ ++QLGL+RSEQL ELYESLS ES+ AA ++R SAA LSPEDL DTEWYYLV
Sbjct: 65 IKADQLGLRRSEQLSELYESLSVAESSSSGVAAGSQVTRRASAAALSPEDLADTEWYYLV 124
Query: 120 CMSFVFNIGEGLPGRALANNQPIWLCNAQYADSKVFSRSLLAK-----TVVCFPHXXXXX 174
CMSFVFNIGEG+PGR AN +PIWLCNA ADSKVFSRSLLAK TVVCFP
Sbjct: 125 CMSFVFNIGEGMPGRTFANGEPIWLCNAHTADSKVFSRSLLAKSAAVKTVVCFPFLGGVV 184
Query: 175 XXXXXXXXXXXPGFIQHIKTSFMEIPCP---MISGNSSSGAGNMRDDKDLACAALCSQNL 231
IQ +KTSF+E P P ++ S N+ D + +
Sbjct: 185 EIGTTEHITEDMNVIQCVKTSFLEAPDPYATILPARSDYHIDNVLDPQQILG-------- 236
Query: 232 DTTMVPVVGYEVLEMASPDNNGSSGI--KHNQPADD--SFMVEGINGVASQVQSWQFMDD 287
D P+ E ASP ++G +H Q ADD SFM E I G ASQVQSWQ MDD
Sbjct: 237 DEIYAPMFSTEPFPTASPSRT-TNGFDQEHEQVADDHDSFMTERITGGASQVQSWQLMDD 295
Query: 288 EFSNCVH-SVNSSDSISQTLVD-AAKCVSASKDDKKIGHCLQEVEECNPTELTSLDPQGH 345
E SNCVH S+NSSD +SQT V+ AA V+ ++ Q E+ + S DP+
Sbjct: 296 ELSNCVHQSLNSSDCVSQTFVEGAAGRVAYGARKSRVQRLGQIQEQQRNVKTLSFDPRND 355
Query: 346 DLHYQSVLSSLLKTSHQLVSRPHFQNHSQESSFASWKKGGLVSCKKQR-DGVSQKLLKKI 404
D+HYQSV+S++ KT+HQL+ P F+N ++SSF WKK S SQ +LKKI
Sbjct: 356 DVHYQSVISTIFKTNHQLILGPQFRNCDKQSSFTRWKKSSSSSSGTATVTAPSQGMLKKI 415
Query: 405 LFEVPRIINYRLLESSEDNHIKDDVSRLEAEETATNHVKSERRQRGKLNERFVILKSMVP 464
+F+VPR+ ++ + D EA + NH E+++R KLNERF+ L+ ++P
Sbjct: 416 IFDVPRV-------HQKEKLMLDSP---EARDETGNHAVLEKKRREKLNERFMTLRKIIP 465
Query: 465 SVSKFDKVSILDDTIEYVQELERKVKELESCR 496
S++K DKVSILDDTIEY+QELER+V+ELESCR
Sbjct: 466 SINKIDKVSILDDTIEYLQELERRVQELESCR 497
Score = 498 (180.4 bits), Expect = 1.2e-47, P = 1.2e-47
Identities = 143/438 (32%), Positives = 207/438 (47%)
Query: 154 VFSRSLLAKTVVCFPHXXXXXXXXXXXXXXXXPGFIQHIKTSFMEIPCP---MISGNSSS 210
+ ++S KTVVCFP IQ +KTSF+E P P ++ S
Sbjct: 164 LLAKSAAVKTVVCFPFLGGVVEIGTTEHITEDMNVIQCVKTSFLEAPDPYATILPARSDY 223
Query: 211 GAGNMRDDKDLACAALCSQNLDTTMVPVVGYEVLEMASPDNNGSSGIKHNQPADDSFMVE 270
N+ D + + + + T P + H DSFM E
Sbjct: 224 HIDNVLDPQQILGDEIYAPMFSTEPFPTASPSRTTNGFDQEHEQVADDH-----DSFMTE 278
Query: 271 GINGVASQVQSWQFMDDEFSNCVH-SVNSSDSISQTLVD-AAKCVSASKDDKKIGHCLQE 328
I G ASQVQSWQ MDDE SNCVH S+NSSD +SQT V+ AA V+ ++ Q
Sbjct: 279 RITGGASQVQSWQLMDDELSNCVHQSLNSSDCVSQTFVEGAAGRVAYGARKSRVQRLGQI 338
Query: 329 VEECNPTELTSLDPQGHDLHYQSVLSSLLKTSHQLVSRPHFQNHSQESSFASWKKGGLVS 388
E+ + S DP+ D+HYQSV+S++ KT+HQL+ P F+N ++SSF WKK S
Sbjct: 339 QEQQRNVKTLSFDPRNDDVHYQSVISTIFKTNHQLILGPQFRNCDKQSSFTRWKKSSSSS 398
Query: 389 CKKQR-DGVSQKLLKKILFEVPRIINYR--LLESSEDNHIKDDVSRLEAE--ETATNHVK 443
SQ +LKKI+F+VPR+ +L+S E + + LE + E
Sbjct: 399 SGTATVTAPSQGMLKKIIFDVPRVHQKEKLMLDSPEARDETGNHAVLEKKRREKLNERFM 458
Query: 444 SERRQRGKLN--ERFVILKSMVPSVSKFDK-VSILDDTIEYVQELER---KVKELESCRA 497
+ R+ +N ++ IL + + + ++ V L+ E R +K + C A
Sbjct: 459 TLRKIIPSINKIDKVSILDDTIEYLQELERRVQELESCRESTDTETRGTMTMKRKKPCDA 518
Query: 498 --KLEANYDNXXXXXXXXXXXXDIYESEPEFERFA-TADNINVSINEKDVQIEIKCPWRE 554
+ AN N ++ E+EP F DN+ + +V IE++C WRE
Sbjct: 519 GERTSANCANNETGNGKKVSVNNVGEAEPADTGFTGLTDNLRIGSFGNEVVIELRCAWRE 578
Query: 555 GMLLEIMDAISNLHLYSH 572
G+LLEIMD IS+LHL SH
Sbjct: 579 GVLLEIMDVISDLHLDSH 596
>TAIR|locus:2026629 [details] [associations]
symbol:EGL3 "AT1G63650" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009957 "epidermal
cell fate specification" evidence=RCA;IMP] [GO:0001708 "cell fate
specification" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009913 "epidermal cell
differentiation" evidence=RCA] [GO:0009965 "leaf morphogenesis"
evidence=RCA] [GO:0016570 "histone modification" evidence=RCA]
[GO:0048449 "floral organ formation" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
InterPro:IPR025610 Pfam:PF14215 EMBL:AF251687 EMBL:AF013465
EMBL:AF027732 EMBL:AC011622 IPI:IPI00545374 PIR:D96661
RefSeq:NP_001185302.1 RefSeq:NP_176552.1 RefSeq:NP_974080.1
UniGene:At.25024 ProteinModelPortal:Q9CAD0 SMR:Q9CAD0 IntAct:Q9CAD0
STRING:Q9CAD0 PRIDE:Q9CAD0 EnsemblPlants:AT1G63650.1
EnsemblPlants:AT1G63650.2 EnsemblPlants:AT1G63650.3 GeneID:842669
KEGG:ath:AT1G63650 GeneFarm:1894 TAIR:At1g63650 eggNOG:NOG320411
HOGENOM:HOG000237985 InParanoid:Q9CAD0 OMA:ERASANC PhylomeDB:Q9CAD0
ProtClustDB:CLSN2682588 Genevestigator:Q9CAD0 GermOnline:AT1G63650
GO:GO:0009957 Uniprot:Q9CAD0
Length = 596
Score = 962 (343.7 bits), Expect = 8.4e-97, P = 8.4e-97
Identities = 244/582 (41%), Positives = 333/582 (57%)
Query: 10 KRVPESLKKQLALAVRSIQWSYAIFWTISDTQPGVLEWGDGYYNGDIKTRKTIQSVELSS 69
+ VP++LKKQLA++VR+IQWSY IFW++S +QPGVLEWGDGYYNGDIKTRKTIQ+ E+
Sbjct: 7 RTVPDNLKKQLAVSVRNIQWSYGIFWSVSASQPGVLEWGDGYYNGDIKTRKTIQAAEVKI 66
Query: 70 NQLGLQRSEQLRELYESLSAGESNPQAAS---KRPSAA-LSPEDLTDTEWYYLVCMSFVF 125
+QLGL+RSEQLRELYESLS ES+ +S +R SAA LSPEDLTDTEWYYLVCMSFVF
Sbjct: 67 DQLGLERSEQLRELYESLSLAESSASGSSQVTRRASAAALSPEDLTDTEWYYLVCMSFVF 126
Query: 126 NIGEGLPGRALANNQPIWLCNAQYADSKVFSRSLLAK-----TVVCFPHXXXXXXXXXXX 180
NIGEG+PG AL+N +PIWLCNA+ ADSKVF+RSLLAK TVVCFP
Sbjct: 127 NIGEGIPGGALSNGEPIWLCNAETADSKVFTRSLLAKSASLQTVVCFPFLGGVLEIGTTE 186
Query: 181 XXXXXPGFIQHIKTSFMEIPCPMISGNSSSGAGNMRDDKDLACAALCSQNLDTTMVPVVG 240
IQ +KT F+E P P + ++ S + D D PV
Sbjct: 187 HIKEDMNVIQSVKTLFLEAP-PYTTISTRSDYQEIFDPLS-----------DDKYTPVF- 233
Query: 241 YEVLEMASPDNNGSSGIKHNQPAD-DSFMVEGINGVASQVQSWQFMDDEFSNCVH-SVNS 298
+ E A P + +SG + +P D DSF+ +G G ASQVQSWQF+ +E SNC+H S+NS
Sbjct: 234 --ITE-AFPTTS-TSGFEQ-EPEDHDSFINDG--G-ASQVQSWQFVGEEISNCIHQSLNS 285
Query: 299 SDSISQTLVDAAKCVSASKDDKKIGHCLQEVEECNPTELTSLDPQGHDLHYQSVLSSLLK 358
SD +SQT V ++ +I Q E+ N + D+HYQ V+S++ K
Sbjct: 286 SDCVSQTFVGTTGRLACDPRKSRIQRLGQIQEQSNHVNMDD------DVHYQGVISTIFK 339
Query: 359 TSHQLVSRPHFQNHSQESSFASWKKGGLVSC--KKQRDGVSQKLLKKILFEVPRIINYRL 416
T+HQL+ P FQN + SSF WK+ V +K + + + L + L +
Sbjct: 340 TTHQLILGPQFQNFDKRSSFTRWKRSSSVKTLGEKSQKMIKKILFEVPLMNKKEELLPDT 399
Query: 417 LESSEDNHIKDDVSRLEAEE---TATNHVKSERR--QRGKLNERFVILKSMVPSVSKFDK 471
E + ++ + + R + E T + + S + + L++ L+ + V + +
Sbjct: 400 PEETGNHALSEKKRREKLNERFMTLRSIIPSISKIDKVSILDDTIEYLQDLQKRVQELES 459
Query: 472 VSILDDTIEYVQELERKVKELESCRAKLEANYDNXXXXXXXXXXXXDIYESEPEFERFA- 530
DT + ++RK + E RA AN N ++ E EP +A
Sbjct: 460 CRESADTETRITMMKRKKPDDEEERAS--ANCMNSKRKGSDV----NVGEDEPADIGYAG 513
Query: 531 TADNINVSINEKDVQIEIKCPWREGMLLEIMDAISNLHLYSH 572
DN+ +S +V IE++C WREG+LLEIMD IS+L+L SH
Sbjct: 514 LTDNLRISSLGNEVVIELRCAWREGILLEIMDVISDLNLDSH 555
>UNIPROTKB|Q7XPS7 [details] [associations]
symbol:OSJNBa0065O17.4 "OSJNBa0065O17.4 protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
InterPro:IPR025610 Pfam:PF14215 EMBL:AL606682
ProteinModelPortal:Q7XPS7 Gramene:Q7XPS7 Uniprot:Q7XPS7
Length = 567
Score = 500 (181.1 bits), Expect = 4.2e-71, Sum P(2) = 4.2e-71
Identities = 95/149 (63%), Positives = 117/149 (78%)
Query: 20 LALAVRSIQWSYAIFWTISDTQPGVLEWGDGYYNGDIKTRKTIQSVELSSNQLGLQRSEQ 79
LA AVRSI WSYAIFW+IS + PGVL W DG+YNG +KTRK S +L++ QL +QRSEQ
Sbjct: 23 LAAAVRSISWSYAIFWSISTSCPGVLTWNDGFYNGVVKTRKISNSADLTAGQLVVQRSEQ 82
Query: 80 LRELYESLSAGESNPQAASKRPSAALSPEDLTDTEWYYLVCMSFVFNIGEGLPGRALANN 139
LRELY SL +GE + +A +RP AALSPEDL DTEWYY+VCM++ F G+GLPG++ A+N
Sbjct: 83 LRELYYSLLSGECDHRA--RRPIAALSPEDLADTEWYYVVCMTYSFQPGQGLPGKSYASN 140
Query: 140 QPIWLCNAQYADSKVFSRSLLAKTVVCFP 168
+WL NAQ ADSK F RSLLAKT++C P
Sbjct: 141 ASVWLRNAQSADSKTFLRSLLAKTIICIP 169
Score = 238 (88.8 bits), Expect = 4.2e-71, Sum P(2) = 4.2e-71
Identities = 72/204 (35%), Positives = 105/204 (51%)
Query: 372 HSQESSFASWK--KGGLVSCKKQRDGVSQKLLKKILFEVPRIINYRLLESSEDNHIKDDV 429
+SQ S F +WK K ++ SQKLLKK++ R+ R S
Sbjct: 333 NSQVSCFMAWKSAKSNEMAVPVVTGIESQKLLKKVVDCGARMSTGR---GSR-------- 381
Query: 430 SRLEAEETATNHVKSERRQRGKLNERFVILKSMVPSVSKFDKVSILDDTIEYVQELERKV 489
+ L E NHV SERR+R KLNE F+ILKS+VPS+ K DK SIL++TI Y++ LE++V
Sbjct: 382 AALTQESGIKNHVISERRRREKLNEMFLILKSIVPSIHKVDKASILEETIAYLKVLEKRV 441
Query: 490 KELESCRAKLEANYDNXXXXXXXXXXXXDIYESEPEFERFATAD----NINVSINEKDVQ 545
KELES ++ SE A ++NV++ +K V
Sbjct: 442 KELESSSEPSHQRATETGQQRRCEITGKELV-SEIGVSGGGDAGREHHHVNVTVTDKVVL 500
Query: 546 IEIKCPWREGMLLEIMDAISNLHL 569
+E++C W+E ++ + DAI +L L
Sbjct: 501 LEVQCRWKELVMTRVFDAIKSLCL 524
>TAIR|locus:2118524 [details] [associations]
symbol:TT8 "AT4G09820" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0009962 "regulation of flavonoid
biosynthetic process" evidence=TAS] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0005515 "protein binding" evidence=IPI] [GO:2000029 "regulation
of proanthocyanidin biosynthetic process" evidence=IEP] [GO:0010026
"trichome differentiation" evidence=IMP] [GO:0009718
"anthocyanin-containing compound biosynthetic process"
evidence=RCA] [GO:0009744 "response to sucrose stimulus"
evidence=RCA] [GO:0010224 "response to UV-B" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
InterPro:IPR025610 Pfam:PF14215 EMBL:AL161516 GO:GO:0009813
EMBL:AL049482 HOGENOM:HOG000237985 GO:GO:0010026 GO:GO:2000029
EMBL:AJ277509 EMBL:DQ446813 EMBL:DQ653187 IPI:IPI00530243
RefSeq:NP_192720.2 UniGene:At.10175 ProteinModelPortal:Q9FT81
SMR:Q9FT81 IntAct:Q9FT81 STRING:Q9FT81 PaxDb:Q9FT81 PRIDE:Q9FT81
EnsemblPlants:AT4G09820.1 GeneID:826571 KEGG:ath:AT4G09820
TAIR:At4g09820 eggNOG:NOG249918 InParanoid:Q9FT81 OMA:NEVDSKT
PhylomeDB:Q9FT81 ProtClustDB:CLSN2681600 Genevestigator:Q9FT81
Uniprot:Q9FT81
Length = 518
Score = 422 (153.6 bits), Expect = 5.1e-68, Sum P(3) = 5.1e-68
Identities = 96/233 (41%), Positives = 135/233 (57%)
Query: 1 MDTTKIQNQKRVPESLKKQLA----LAVRSIQWSYAIFWTISDTQPGVLEWGDGYYNGDI 56
MD + I ++V + KK+L AV+S+ W+Y++FW Q VL WG+GYYNG I
Sbjct: 1 MDESSIIPAEKVAGAEKKELQGLLKTAVQSVDWTYSVFWQFCPQQR-VLVWGNGYYNGAI 59
Query: 57 KTRKTIQSVELSSNQLGLQRSEQLRELYESLSAGESNPQAASKRPSAALSPEDLTDTEWY 116
KTRKT Q E+++ + L+RS+QLRELYE+L AGES +A R ALSPEDLT+TEW+
Sbjct: 60 KTRKTTQPAEVTAEEAALERSQQLRELYETLLAGESTSEA---RACTALSPEDLTETEWF 116
Query: 117 YLVCMSFVFNIGEGLPGRALANNQPIWLCNAQYADSKVFSRSLLAK-----TVVCFPHXX 171
YL+C+SF F G+PG+A A + +WL A DSK FSR++LAK TVVC P
Sbjct: 117 YLMCVSFSFPPPSGMPGKAYARRKHVWLSGANEVDSKTFSRAILAKSAKIQTVVCIPMLD 176
Query: 172 XXXXXXXXXXXXXXPGFIQHIKTSFMEI----PCPMISGNSSSGAGNMRDDKD 220
F++ K+ F + P P +S +S+ +D++
Sbjct: 177 GVVELGTTKKVREDVEFVELTKSFFYDHCKTNPKPALSEHSTYEVHEEAEDEE 229
Score = 210 (79.0 bits), Expect = 5.1e-68, Sum P(3) = 5.1e-68
Identities = 61/160 (38%), Positives = 94/160 (58%)
Query: 336 ELTSLDPQGHDLHYQSVLSSLLKTSHQLVSRPHFQNHSQESSFASWK-KGGLVSCKKQRD 394
++ +L +G + + Q+V + L+ L+S + +SSFA+W+ + G + +
Sbjct: 273 DMMNLMEEGGN-YSQTVTTLLMSHPTSLLSDSVSTSSYIQSSFATWRVENGKEHQQVKTA 331
Query: 395 GVSQKLLKKILFEVPRIINYRLLESSEDNHIKDDVSRLEAEETATNHVKSERRQRGKLNE 454
SQ +LK+++F VP + DN KD RL E+ + HV +ERR+R KLNE
Sbjct: 332 PSSQWVLKQMIFRVPFL---------HDN-TKD--KRLPREDLS--HVVAERRRREKLNE 377
Query: 455 RFVILKSMVPSVSKFDKVSILDDTIEYVQELERKVKELES 494
+F+ L+SMVP V+K DKVSIL DTI YV L ++V ELE+
Sbjct: 378 KFITLRSMVPFVTKMDKVSILGDTIAYVNHLRKRVHELEN 417
Score = 89 (36.4 bits), Expect = 5.1e-68, Sum P(3) = 5.1e-68
Identities = 15/37 (40%), Positives = 27/37 (72%)
Query: 531 TADNINVSINEKDVQIEIKCPWREGMLLEIMDAISNL 567
T++ + VSI E DV +E++C +R+G+LL+I+ + L
Sbjct: 434 TSEEVEVSIIENDVLLEMRCEYRDGLLLDILQVLHEL 470
>UNIPROTKB|Q948Y2 [details] [associations]
symbol:Plw-OSB2 "R-type basic helix-loop-helix protein"
species:4530 "Oryza sativa" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610
Pfam:PF14215 HOGENOM:HOG000237985 EMBL:AB021080
ProteinModelPortal:Q948Y2 Gramene:Q948Y2 Genevestigator:Q948Y2
Uniprot:Q948Y2
Length = 451
Score = 496 (179.7 bits), Expect = 3.3e-65, Sum P(2) = 3.3e-65
Identities = 107/248 (43%), Positives = 151/248 (60%)
Query: 17 KKQLALAVRSIQWSYAIFWTISDTQPGVLEWGDGYYNGDIKTRKTIQSVELSSNQLGLQR 76
+ +LA AVRSI WSY IFW+ S + PGVL W DG+YNG++KTRK +L+++QL L+R
Sbjct: 20 RSRLAAAVRSISWSYTIFWSTSTSLPGVLTWNDGFYNGEVKTRKISNLEDLTADQLVLRR 79
Query: 77 SEQLRELYESLSAGESNPQAASKRPSAALSPEDLTDTEWYYLVCMSFVFNIGEGLPGRAL 136
SEQL ELY SL +GE + +A ++P AALSPED+ DTEWYY+VCM++ F G+GLPGR+
Sbjct: 80 SEQLSELYYSLLSGECDHRA--RKPVAALSPEDIADTEWYYVVCMTYAFRPGQGLPGRSY 137
Query: 137 ANNQPIWLCNAQYADSKVFSRSLLAK-----TVVCFPHXXXXXXXXXXXXXXXXPGFIQH 191
A+N+ +WLCNAQ ADSK F R+LLAK T+VC P P +
Sbjct: 138 ASNRSVWLCNAQSADSKTFLRALLAKSASIQTIVCIPFMSGVLELGTTDPVSEDPNLVNR 197
Query: 192 IKTSFMEIPCPM-ISGNSSSGAGNMRDDKDLACAALCSQNLDTTMVPVVGYEVLE---MA 247
I E+ P+ + SS+ + + +D D L ++ MV + G + L +A
Sbjct: 198 IVAYLKELQFPICLEVPSSTPSPDETEDADTVFDGLIEED---QMVILQGEDELGDVVVA 254
Query: 248 SPDNNGSS 255
+ NG++
Sbjct: 255 ECETNGAN 262
Score = 186 (70.5 bits), Expect = 3.3e-65, Sum P(2) = 3.3e-65
Identities = 53/127 (41%), Positives = 71/127 (55%)
Query: 372 HSQESSFASWKKGG---LVSCKKQRDGV-SQKLLKKILFEVPRIINYRLLESSEDNHIKD 427
+S S F SWK+ V G+ SQKLLKK + S+ D+
Sbjct: 313 YSHASCFVSWKRANPAEKVVAVPMTAGIESQKLLKKA------VGGGTAWMSNIDDRGSV 366
Query: 428 DVSRLEAEETATNHVKSERRQRGKLNERFVILKSMVPSVSKFDKVSILDDTIEYVQELER 487
++ + HV SERR+R KLNE F+ILKS++PSV K DK SIL +TI Y++ LE+
Sbjct: 367 AITTTPGSNIKS-HVMSERRRREKLNEMFLILKSLLPSVRKVDKASILAETITYLKVLEK 425
Query: 488 KVKELES 494
+VKELES
Sbjct: 426 RVKELES 432
>TAIR|locus:2127023 [details] [associations]
symbol:ATMYC1 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0048629 "trichome
patterning" evidence=IMP] [GO:0001708 "cell fate specification"
evidence=RCA] [GO:0009913 "epidermal cell differentiation"
evidence=RCA] [GO:0009957 "epidermal cell fate specification"
evidence=RCA] [GO:0003677 "DNA binding" evidence=ISS]
InterPro:IPR011598 PROSITE:PS50888 SMART:SM00353 EMBL:CP002687
GO:GO:0003700 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610
Pfam:PF14215 GO:GO:0048629 IPI:IPI00938615 RefSeq:NP_001154194.1
UniGene:At.28313 ProteinModelPortal:F4JHC4 SMR:F4JHC4
EnsemblPlants:AT4G00480.2 GeneID:827965 KEGG:ath:AT4G00480
OMA:FWSLSTR Uniprot:F4JHC4
Length = 580
Score = 480 (174.0 bits), Expect = 1.0e-45, P = 1.0e-45
Identities = 123/318 (38%), Positives = 171/318 (53%)
Query: 10 KRVPESLKKQLALAVRSIQWSYAIFWTISDTQPGVLEWGDGYYNGDIKTRKTIQSVELSS 69
KR L+KQLALAVRS+QWSYAIFW+ S TQPGVLEWG+G YNGD+K RK +S E S
Sbjct: 17 KRQNSLLRKQLALAVRSVQWSYAIFWSSSLTQPGVLEWGEGCYNGDMKKRK--KSYE-SH 73
Query: 70 NQLGLQRSEQLRELYESLSAGESNPQAASKRP------------SAALSPEDLTDTEWYY 117
+ GLQ+S++LR+LY S+ G+S ++ S LSP+DL+D EWYY
Sbjct: 74 YKYGLQKSKELRKLYLSMLEGDSGTTVSTTHDNLNDDDDNCHSTSMMLSPDDLSDEEWYY 133
Query: 118 LVCMSFVFNIGEGLPGRALANNQPIWLCNAQYADSKVFSRSLLAK-----TVVCFPHXXX 172
LV MS+VF+ + LPGRA A + IWLCNAQYA++K+FSRSLLA+ TVVCFP+
Sbjct: 134 LVSMSYVFSPSQCLPGRASATGETIWLCNAQYAENKLFSRSLLARSASIQTVVCFPYLGG 193
Query: 173 XXXXXXXXXXXXXPGFIQHIKTSFMEIPCPMISGNSSSGAGNMRDDKDLACAALCSQNLD 232
+++IK+ MEI + + + ++K + ++L
Sbjct: 194 VIELGVTELISEDHNLLRNIKSCLMEISAHQDNDDEKKMEIKISEEKHQLPLGISDEDLH 253
Query: 233 --TTMVPVVGYEVLEMASPDNNGSSGIKHNQPADDSFMVEGINGVASQVQSWQFMDDEFS 290
T+ V+ Y D N I+H QP +V G S W+ + + S
Sbjct: 254 YKRTISTVLNYSADRSGKNDKN----IRHRQPN----IVTSEPG--SSFLRWKQCEQQVS 303
Query: 291 NCVHSVNSSDSISQTLVD 308
V S + + + L D
Sbjct: 304 GFVQKKKSQNVLRKILHD 321
Score = 216 (81.1 bits), Expect = 2.3e-14, P = 2.3e-14
Identities = 76/269 (28%), Positives = 132/269 (49%)
Query: 318 DDKKIGHCLQEVEECNPTELTSLDPQGHDLHYQSVLSSLLKTSHQLVSRPHFQN--HSQE 375
D+KK+ + E + P ++ DLHY+ +S++L S S + +N H Q
Sbjct: 228 DEKKMEIKISEEKHQLPLGISD-----EDLHYKRTISTVLNYSADR-SGKNDKNIRHRQP 281
Query: 376 SSFASWKKGGLVSCKKQRDGVSQKLLKKILFEVPRIINYRLLESSEDNHIKDDVSRLEAE 435
+ S + K+ VS + KK V R ++L H K ++
Sbjct: 282 NIVTSEPGSSFLRWKQCEQQVSGFVQKKKSQNVLR----KILHDVPLMHTK---RMFPSQ 334
Query: 436 ETATNHVKSERRQRGKLNERFVILKSMVPSVSKFDKVSILDDTIEYVQELERKVKELESC 495
+ N + + R K NE+F +L++MVP+V++ DK SIL++TI+Y+QELE +V+ELESC
Sbjct: 335 NSGLN--QDDPSDRRKENEKFSVLRTMVPTVNEVDKESILNNTIKYLQELEARVEELESC 392
Query: 496 ---------RAKLEANYDNXXXXXXXXXXXXD---IYESEPEFER---FATADNINVSIN 540
+ K N ++ D I ++ E E+ F ++ V +
Sbjct: 393 MGSVNFVERQRKTTENLNDSVLIEETSGNYDDSTKIDDNSGETEQVTVFRDKTHLRVKLK 452
Query: 541 EKDVQIEIKCPWREGMLLEIMDAISNLHL 569
E +V IE++C +R+ ++ +IM+ +SNLH+
Sbjct: 453 ETEVVIEVRCSYRDYIVADIMETLSNLHM 481
>TAIR|locus:2178555 [details] [associations]
symbol:MYC3 "AT5G46760" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009718
"anthocyanin-containing compound biosynthetic process"
evidence=IMP] [GO:0009753 "response to jasmonic acid stimulus"
evidence=IMP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006952 "defense response"
evidence=IMP] [GO:0043425 "bHLH transcription factor binding"
evidence=IPI] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0045893 GO:GO:0006952 GO:GO:0009753 GO:GO:0003677
GO:GO:0009718 GO:GO:0003700 GO:GO:0006351 EMBL:AB016882
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238207
InterPro:IPR025610 Pfam:PF14215 EMBL:AF251690 IPI:IPI00533290
RefSeq:NP_199488.1 UniGene:At.28315 ProteinModelPortal:Q9FIP9
SMR:Q9FIP9 DIP:DIP-58585N PaxDb:Q9FIP9 PRIDE:Q9FIP9
EnsemblPlants:AT5G46760.1 GeneID:834719 KEGG:ath:AT5G46760
TAIR:At5g46760 eggNOG:NOG295658 InParanoid:Q9FIP9 OMA:TASSIEM
PhylomeDB:Q9FIP9 ProtClustDB:CLSN2686023 Genevestigator:Q9FIP9
Uniprot:Q9FIP9
Length = 592
Score = 195 (73.7 bits), Expect = 8.6e-27, Sum P(2) = 8.6e-27
Identities = 48/160 (30%), Positives = 83/160 (51%)
Query: 436 ETATNHVKSERRQRGKLNERFVILKSMVPSVSKFDKVSILDDTIEYVQELERKVKELESC 495
E NHV++ER++R KLN+RF L+++VP+VSK DK S+L D I Y+ EL+ K+++ ES
Sbjct: 411 EEPLNHVEAERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAISYINELKSKLQQAESD 470
Query: 496 RAKLEANYDNXXXXXXXXXXXXDIYESEPEFERFATADNINVSINEK----DVQIEIKCP 551
+ +++ D + + +TA +I + I+ K DV I ++C
Sbjct: 471 KEEIQKKLDGMSKEGNNGKGCGSRAKERKSSNQDSTASSIEMEIDVKIIGWDVMIRVQCG 530
Query: 552 WREGMLLEIMDAISNLHLYSHRFNHPPIEAFYLLLSKVST 591
++ M+A+ L L NH + L+ + +T
Sbjct: 531 KKDHPGARFMEALKELDL---EVNHASLSVVNDLMIQQAT 567
Score = 187 (70.9 bits), Expect = 8.6e-27, Sum P(2) = 8.6e-27
Identities = 48/140 (34%), Positives = 72/140 (51%)
Query: 14 ESLKKQLALAVRSI--QWSYAIFWTIS---DTQPG----VLEWGDGYYNGDIKTRKTIQS 64
++L+++L + S W+YAIFW IS D+ G +L WGDGYY G+ K +
Sbjct: 50 DTLQQRLQALIESAGENWTYAIFWQISHDFDSSTGDNTVILGWGDGYYKGEEDKEKKKNN 109
Query: 65 VELSSNQLGLQRSEQLRELYESLSAGESNPQAASKRPSAALSPEDLTDTEWYYLVCMSFV 124
+ + R +REL +S G S + E++TDTEW++LV M+
Sbjct: 110 TNTAEQE---HRKRVIRELNSLISGGIG--------VSDESNDEEVTDTEWFFLVSMTQS 158
Query: 125 FNIGEGLPGRALANNQPIWL 144
F G GLPG + N++ IWL
Sbjct: 159 FVNGVGLPGESFLNSRVIWL 178
>UNIPROTKB|Q336P5 [details] [associations]
symbol:Os10g0575000 "Os10g0575000 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:DP000086 EMBL:AP008216 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238207 InterPro:IPR025610
Pfam:PF14215 eggNOG:NOG295658 KO:K13422 RefSeq:NP_001065478.1
UniGene:Os.100484 STRING:Q336P5 GeneID:4349484 KEGG:osa:4349484
ProtClustDB:CLSN2698296 Uniprot:Q336P5
Length = 699
Score = 205 (77.2 bits), Expect = 3.8e-25, Sum P(2) = 3.8e-25
Identities = 60/164 (36%), Positives = 86/164 (52%)
Query: 14 ESLKKQLALAVRSIQ--WSYAIFWTIS-DTQPG--VLEWGDGYYNG-DIKTRKTIQSVEL 67
++L+++L + + W+YAIFW S D G +L WGDGYY G D RK S
Sbjct: 66 DTLQQRLQSIIEGSRETWTYAIFWQSSIDVSTGASLLGWGDGYYKGCDDDKRKQRSSTPA 125
Query: 68 SSNQLGLQRSEQLRELYESLSAGESNPQAASKRPSAALSPEDLTDTEWYYLVCMSFVFNI 127
++ + R LREL SL AG A P A+ E++TDTEW++LV M+ F
Sbjct: 126 AAAEQE-HRKRVLREL-NSLIAG------AGAAPDEAVE-EEVTDTEWFFLVSMTQSFPN 176
Query: 128 GEGLPGRALANNQPIWLC---NAQYADSKVFSRSLLAKTVVCFP 168
G GLPG+AL QP W+ ++ D + + +T+VC P
Sbjct: 177 GLGLPGQALFAAQPTWIATGLSSAPCDRARQAYTFGLRTMVCLP 220
Score = 163 (62.4 bits), Expect = 3.8e-25, Sum P(2) = 3.8e-25
Identities = 31/70 (44%), Positives = 49/70 (70%)
Query: 436 ETATNHVKSERRQRGKLNERFVILKSMVPSVSKFDKVSILDDTIEYVQELERKVKELESC 495
E NHV++ER++R KLN+RF L+++VP+VSK DK S+L D I Y+ EL K+ LE+
Sbjct: 520 EEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELRGKLTALETD 579
Query: 496 RAKLEANYDN 505
+ L++ ++
Sbjct: 580 KETLQSQMES 589
>TAIR|locus:2039094 [details] [associations]
symbol:AIB "AT2G46510" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;IDA] [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0009611 "response to wounding" evidence=IEP;RCA]
[GO:0009737 "response to abscisic acid stimulus" evidence=RCA;IMP]
[GO:0006612 "protein targeting to membrane" evidence=RCA]
[GO:0007165 "signal transduction" evidence=RCA] [GO:0009414
"response to water deprivation" evidence=RCA] [GO:0009620 "response
to fungus" evidence=RCA] [GO:0009695 "jasmonic acid biosynthetic
process" evidence=RCA] [GO:0009723 "response to ethylene stimulus"
evidence=RCA] [GO:0009733 "response to auxin stimulus"
evidence=RCA] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=RCA] [GO:0009753 "response to jasmonic acid
stimulus" evidence=RCA] [GO:0009863 "salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=RCA] [GO:0010363 "regulation
of plant-type hypersensitive response" evidence=RCA] [GO:0042538
"hyperosmotic salinity response" evidence=RCA] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0009737
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009611
GO:GO:0009738 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:AC006526 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC006418
EMBL:AY094399 IPI:IPI00535471 PIR:G84903 RefSeq:NP_566078.1
UniGene:At.19872 ProteinModelPortal:Q9ZPY8 SMR:Q9ZPY8 PaxDb:Q9ZPY8
PRIDE:Q9ZPY8 EnsemblPlants:AT2G46510.1 GeneID:819262
KEGG:ath:AT2G46510 TAIR:At2g46510 eggNOG:NOG313259
HOGENOM:HOG000238207 InParanoid:Q9ZPY8 OMA:KIMEDER PhylomeDB:Q9ZPY8
ProtClustDB:CLSN2917347 Genevestigator:Q9ZPY8 InterPro:IPR025610
Pfam:PF14215 Uniprot:Q9ZPY8
Length = 566
Score = 194 (73.4 bits), Expect = 7.3e-25, Sum P(2) = 7.3e-25
Identities = 76/308 (24%), Positives = 132/308 (42%)
Query: 14 ESLKKQLALAV-----RSIQWSYAIFW--TISDTQPGVLEWGDGYYN--GDIKTRKTIQS 64
++L K+L+ V + W+YAIFW T+S + VL WGDG + + K ++S
Sbjct: 46 DTLNKKLSSLVDWPNSENFSWNYAIFWQQTMSRSGQQVLGWGDGCCREPNEEEESKVVRS 105
Query: 65 VELSSNQLGLQRSEQLRELYESLSAGESNPQAASKRPSAALSPEDLTDTEWYYLVCMSFV 124
N +G + E +++ + + S + ALS E +T TE ++L M F
Sbjct: 106 YNF--NNMGAEE-ETWQDMRKRVLQKLHRLFGGSDEDNYALSLEKVTATEIFFLASMYFF 162
Query: 125 FNIGEGLPGRALANNQPIWLCNAQYADSKVFSRSLLAK-----TVVCFPHXXXXXXXXXX 179
FN GEG PGR ++ + +WL +A ++S RS +AK T+V P
Sbjct: 163 FNHGEGGPGRCYSSGKHVWLSDAVNSESDYCFRSFMAKSAGIRTIVMVPTDAGVLELGSV 222
Query: 180 XXXXXXPGFIQHIKTSFME-IPCP-MISGNSSSGAG-NMRDDKDLACAALCSQNLDTTMV 236
G ++ ++ FM + P M++ N++ G + +DL+ A + L+
Sbjct: 223 WSLPENIGLVKSVQALFMRRVTQPVMVTSNTNMTGGIHKLFGQDLSGAHAYPKKLEVRRN 282
Query: 237 PVVGYEVLEMASPDNNGSSGIKHNQPADDSFMVEGINGVASQVQSWQFMDDEFSNCVHSV 296
+ +NN + DD ++E +N V ++ S+ S
Sbjct: 283 LDERFTPQSWEGYNNNKGPTFGYTPQRDDVKVLENVNMVVDNNNYKTQIEFAGSSVAASS 342
Query: 297 NSSDSISQ 304
N S + Q
Sbjct: 343 NPSTNTQQ 350
Score = 169 (64.5 bits), Expect = 7.3e-25, Sum P(2) = 7.3e-25
Identities = 32/61 (52%), Positives = 46/61 (75%)
Query: 436 ETATNHVKSERRQRGKLNERFVILKSMVPSVSKFDKVSILDDTIEYVQELERKVKELESC 495
E NHV++ER++R KLN+RF L+S+VP++SK DK S+L D I Y++EL+ KVK +E
Sbjct: 391 EEPLNHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAISYIKELQEKVKIMEDE 450
Query: 496 R 496
R
Sbjct: 451 R 451
>TAIR|locus:2141055 [details] [associations]
symbol:MYC4 "AT4G17880" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009718 "anthocyanin-containing compound biosynthetic process"
evidence=IMP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006952 "defense response"
evidence=IMP] [GO:0043425 "bHLH transcription factor binding"
evidence=IPI] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0045893 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0006952 GO:GO:0003677 GO:GO:0009718
GO:GO:0003700 GO:GO:0006351 EMBL:AL161547 EMBL:AL021889
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238207
InterPro:IPR025610 Pfam:PF14215 eggNOG:NOG295658
ProtClustDB:CLSN2686023 EMBL:AF251689 EMBL:AK221507 IPI:IPI00540927
PIR:T05074 RefSeq:NP_193522.1 UniGene:At.28316
ProteinModelPortal:O49687 SMR:O49687 EnsemblPlants:AT4G17880.1
GeneID:827511 KEGG:ath:AT4G17880 TAIR:At4g17880 InParanoid:O49687
OMA:SCERARQ PhylomeDB:O49687 Genevestigator:O49687 Uniprot:O49687
Length = 589
Score = 181 (68.8 bits), Expect = 2.7e-24, Sum P(2) = 2.7e-24
Identities = 47/156 (30%), Positives = 77/156 (49%)
Query: 436 ETATNHVKSERRQRGKLNERFVILKSMVPSVSKFDKVSILDDTIEYVQELERKVKELESC 495
E NHV++ER++R KLN+RF L+++VP+VSK DK S+L D I Y+ EL+ K+++ ES
Sbjct: 412 EEPLNHVEAERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAISYISELKSKLQKAESD 471
Query: 496 RAKLEANYDNXXXXXXXXXXXXDIYESEPEFERFATADNINVSINEKDVQIEIKCPWREG 555
+ +L+ D + + ++V I D I I+C R
Sbjct: 472 KEELQKQIDVMNKEAGNAKSSVKDRKCLNQESSVLIEMEVDVKIIGWDAMIRIQCSKRNH 531
Query: 556 MLLEIMDAISNLHLYSHRFNHPPIEAFYLLLSKVST 591
+ M+A+ L L NH + L+ + +T
Sbjct: 532 PGAKFMEALKELDL---EVNHASLSVVNDLMIQQAT 564
Score = 178 (67.7 bits), Expect = 2.7e-24, Sum P(2) = 2.7e-24
Identities = 48/143 (33%), Positives = 72/143 (50%)
Query: 14 ESLKKQLALAVRSIQ--WSYAIFWTISDTQPG---------VLEWGDGYYNGDI-KTRKT 61
++L+++L + W+YA+FW S G +L WGDGYY G+ K+RK
Sbjct: 61 DNLQQRLQALIEGANENWTYAVFWQSSHGFAGEDNNNNNTVLLGWGDGYYKGEEEKSRKK 120
Query: 62 IQSVELSSNQLGLQRSEQLRELYESLSAGESNPQAASKRPSAALSPEDLTDTEWYYLVCM 121
+ ++ Q R +REL +S G A E++TDTEW++LV M
Sbjct: 121 KSNPASAAEQE--HRKRVIRELNSLISGGVGGGDEAGD--------EEVTDTEWFFLVSM 170
Query: 122 SFVFNIGEGLPGRALANNQPIWL 144
+ F G GLPG+A +N+ IWL
Sbjct: 171 TQSFVKGTGLPGQAFSNSDTIWL 193
>TAIR|locus:2035237 [details] [associations]
symbol:AT1G01260 "AT1G01260" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009694 "jasmonic acid metabolic process" evidence=RCA]
[GO:0009753 "response to jasmonic acid stimulus" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
eggNOG:NOG313259 HOGENOM:HOG000238207 InterPro:IPR025610
Pfam:PF14215 EMBL:AF251698 EMBL:AC023628 EMBL:AF488559
EMBL:AY079012 EMBL:AY120752 EMBL:BT004517 IPI:IPI00539052
PIR:H86142 RefSeq:NP_001077440.1 RefSeq:NP_001184883.1
RefSeq:NP_171634.1 UniGene:At.28312 ProteinModelPortal:Q9LNJ5
SMR:Q9LNJ5 IntAct:Q9LNJ5 EnsemblPlants:AT1G01260.1
EnsemblPlants:AT1G01260.2 EnsemblPlants:AT1G01260.3 GeneID:839545
KEGG:ath:AT1G01260 TAIR:At1g01260 InParanoid:Q9LNJ5 OMA:FPANYCY
PhylomeDB:Q9LNJ5 ProtClustDB:CLSN2682849 Genevestigator:Q9LNJ5
Uniprot:Q9LNJ5
Length = 590
Score = 177 (67.4 bits), Expect = 1.7e-23, Sum P(3) = 1.7e-23
Identities = 47/141 (33%), Positives = 72/141 (51%)
Query: 26 SIQWSYAIFWTISDTQPG--VLEWGDGYYNGDIKTRKTIQSVELSSNQLGLQRSEQLREL 83
+ W+YAIFW IS ++ G VL WGDGY + K+ + V + L + R E+ +
Sbjct: 63 NFSWNYAIFWQISRSKAGDLVLCWGDGYCREPKEGEKS-EIVRI----LSMGREEETHQT 117
Query: 84 YESLSAGESNPQ-AASKRPSAALSPEDLTDTEWYYLVCMSFVFNIGEGLPGRALANNQPI 142
+ + S+ + AL + +TDTE + L M F F GEG PG+ A+ +P+
Sbjct: 118 MRKRVLQKLHDLFGGSEEENCALGLDRVTDTEMFLLSSMYFSFPRGEGGPGKCFASAKPV 177
Query: 143 WLCNAQYADSKVFSRSLLAKT 163
WL + + S RS LAK+
Sbjct: 178 WLSDVVNSGSDYCVRSFLAKS 198
Score = 169 (64.5 bits), Expect = 1.7e-23, Sum P(3) = 1.7e-23
Identities = 31/62 (50%), Positives = 47/62 (75%)
Query: 438 ATNHVKSERRQRGKLNERFVILKSMVPSVSKFDKVSILDDTIEYVQELERKVKELESCRA 497
A NHV++ER++R KLN+RF L+S+VP++SK DK S+L D + Y+ EL K+K +E+ R
Sbjct: 431 ALNHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAVSYINELHAKLKVMEAERE 490
Query: 498 KL 499
+L
Sbjct: 491 RL 492
Score = 48 (22.0 bits), Expect = 1.7e-23, Sum P(3) = 1.7e-23
Identities = 11/32 (34%), Positives = 16/32 (50%)
Query: 520 YESEPEFERFATADNINVSINEKDVQIEIKCP 551
Y S P + +INV + +DV + I CP
Sbjct: 494 YSSNPPI---SLDSDINVQTSGEDVTVRINCP 522
>TAIR|locus:2035609 [details] [associations]
symbol:MYC2 "AT1G32640" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0009867 "jasmonic acid mediated
signaling pathway" evidence=RCA;IMP] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0009963 "positive regulation of flavonoid biosynthetic process"
evidence=IEP;RCA] [GO:0043619 "regulation of transcription from RNA
polymerase II promoter in response to oxidative stress"
evidence=IMP] [GO:0051090 "regulation of sequence-specific DNA
binding transcription factor activity" evidence=IMP] [GO:2000068
"regulation of defense response to insect" evidence=IMP]
[GO:0009611 "response to wounding" evidence=IEP;RCA;TAS]
[GO:0010200 "response to chitin" evidence=IEP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009753 "response to jasmonic acid
stimulus" evidence=RCA;IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0006612 "protein
targeting to membrane" evidence=RCA] [GO:0009620 "response to
fungus" evidence=RCA] [GO:0009694 "jasmonic acid metabolic process"
evidence=RCA] [GO:0009695 "jasmonic acid biosynthetic process"
evidence=RCA] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=RCA] [GO:0009863 "salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0043069
"negative regulation of programmed cell death" evidence=RCA]
[GO:0009269 "response to desiccation" evidence=IEP] [GO:0009737
"response to abscisic acid stimulus" evidence=IEP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0009737 GO:GO:0005634
GO:GO:0045893 GO:GO:0009753 GO:GO:0009611 GO:GO:0009738
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0010200
EMBL:AC017118 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238207 InterPro:IPR025610 Pfam:PF14215 GO:GO:0009269
GO:GO:0043619 GO:GO:0051090 eggNOG:NOG295658 GO:GO:0009963
EMBL:X99548 EMBL:AB000875 EMBL:AJ843256 EMBL:AY037203 EMBL:BT003042
EMBL:AF251691 IPI:IPI00543978 PIR:T52293 RefSeq:NP_174541.1
UniGene:At.22648 ProteinModelPortal:Q39204 SMR:Q39204 IntAct:Q39204
STRING:Q39204 PRIDE:Q39204 EnsemblPlants:AT1G32640.1 GeneID:840158
KEGG:ath:AT1G32640 GeneFarm:1895 TAIR:At1g32640 InParanoid:Q39204
KO:K13422 OMA:KRNHPAA PhylomeDB:Q39204 ProtClustDB:CLSN2682813
Genevestigator:Q39204 GermOnline:AT1G32640 GO:GO:2000068
Uniprot:Q39204
Length = 623
Score = 186 (70.5 bits), Expect = 2.6e-23, Sum P(2) = 2.6e-23
Identities = 53/167 (31%), Positives = 76/167 (45%)
Query: 14 ESLKKQLALAVRSIQ--WSYAIFWTISDTQPG--VLEWGDGYYNGD---IKTRKTIQSVE 66
E+L+++L + W+YAIFW S G VL WGDGYY G+ R+ S
Sbjct: 66 ETLQQRLQALIEGTHEGWTYAIFWQPSYDFSGASVLGWGDGYYKGEEDKANPRRRSSSPP 125
Query: 67 LSSNQLGLQRSEQLRELYESLSAGESNPQAASKRPSAALSPEDLTDTEWYYLVCMSFVFN 126
S+ R + LREL +S G + PS E++TDTEW++LV M+ F
Sbjct: 126 FSTPADQEYRKKVLRELNSLISGGVA--------PSDDAVDEEVTDTEWFFLVSMTQSFA 177
Query: 127 IGEGLPGRALANNQPIWLCNAQYADSKVFSRSLLA-----KTVVCFP 168
G GL G+A A +W+ + R+ T+ C P
Sbjct: 178 CGAGLAGKAFATGNAVWVSGSDQLSGSGCERAKQGGVFGMHTIACIP 224
Score = 164 (62.8 bits), Expect = 2.6e-23, Sum P(2) = 2.6e-23
Identities = 45/157 (28%), Positives = 73/157 (46%)
Query: 436 ETATNHVKSERRQRGKLNERFVILKSMVPSVSKFDKVSILDDTIEYVQELERKVKELESC 495
E NHV++ER++R KLN+RF L+++VP+VSK DK S+L D I Y+ EL+ KV + ES
Sbjct: 448 EEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIAYINELKSKVVKTESE 507
Query: 496 RAKLEANYDNXXXXXXXXXXXXDIYESEPEFERFATAD-NINVSINEKDVQIEIKCPWRE 554
+ +++ + + I V I D I ++ R
Sbjct: 508 KLQIKNQLEEVKLELAGRKASASGGDMSSSCSSIKPVGMEIEVKIIGWDAMIRVESSKRN 567
Query: 555 GMLLEIMDAISNLHLYSHRFNHPPIEAFYLLLSKVST 591
+M A+ +L L NH + L+ + +T
Sbjct: 568 HPAARLMSALMDLEL---EVNHASMSVVNDLMIQQAT 601
>TAIR|locus:2172932 [details] [associations]
symbol:NIG1 "AT5G46830" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;TAS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0005509 "calcium ion binding" evidence=IDA]
[GO:0009651 "response to salt stress" evidence=IEP] [GO:0042538
"hyperosmotic salinity response" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0005509
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238207 InterPro:IPR025610 Pfam:PF14215 GO:GO:0042538
EMBL:AF252636 EMBL:AB022221 IPI:IPI00544679 RefSeq:NP_199495.1
UniGene:At.28311 ProteinModelPortal:Q9LUK7 SMR:Q9LUK7
EnsemblPlants:AT5G46830.1 GeneID:834727 KEGG:ath:AT5G46830
TAIR:At5g46830 eggNOG:NOG258937 InParanoid:Q9LUK7 OMA:HVEAERM
PhylomeDB:Q9LUK7 ProtClustDB:CLSN2914881 ArrayExpress:Q9LUK7
Genevestigator:Q9LUK7 Uniprot:Q9LUK7
Length = 511
Score = 176 (67.0 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
Identities = 53/152 (34%), Positives = 78/152 (51%)
Query: 29 WSYAIFWTIS-DTQPG--VLEWGDGYYNG--DIKTRKTIQSVE--LSSNQLGLQRSEQLR 81
WSYAIFW S D G VL+WGDG Y G + KTR ++ + LSS + +RS +R
Sbjct: 49 WSYAIFWKPSYDDFSGEAVLKWGDGVYTGGNEEKTRGRLRRKKTILSSPEEKERRSNVIR 108
Query: 82 ELYESLSAGESNPQAASKRPSAALSPEDLTDTEWYYLVCMSFVFNIGEGLPGRALANNQP 141
EL +S GE+ P ++TD EW++LV M++ F G GL G+A A+ P
Sbjct: 109 ELNLMIS-GEAFPVVEDDVSDD--DDVEVTDMEWFFLVSMTWSFGNGSGLAGKAFASYNP 165
Query: 142 IWLCNAQ--YA---DSKVFSRSLLAKTVVCFP 168
+ + + Y D + +T++C P
Sbjct: 166 VLVTGSDLIYGSGCDRAKQGGDVGLQTILCIP 197
Score = 166 (63.5 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
Identities = 46/143 (32%), Positives = 74/143 (51%)
Query: 440 NHVKSERRQRGKLNERFVILKSMVPSVSKFDKVSILDDTIEYVQELERKVKELESCRAKL 499
NHV++ER +R KLN RF L+++VP+VSK DK S+L+D + Y+ EL+ K + +E + +
Sbjct: 343 NHVEAERMRREKLNHRFYALRAVVPNVSKMDKTSLLEDAVCYINELKSKAENVELEKHAI 402
Query: 500 EANYDNXXXXXXXXXXXXDIYESEPEFERFATADNINVSINEKD---VQIEIKCPWREGM 556
E ++ + + E E+ + I V I E D V++E + G
Sbjct: 403 EIQFNELKEIAGQRNAIPSVCKYE---EKASEMMKIEVKIMESDDAMVRVESRKDHHPGA 459
Query: 557 LLEIMDAISNLHLYSHRFNHPPI 579
L M+A+ +L L NH I
Sbjct: 460 RL--MNALMDLEL---EVNHASI 477
>UNIPROTKB|Q53L62 [details] [associations]
symbol:LOC_Os11g15210 "Helix-loop-helix DNA-binding domain,
putative" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
EMBL:DP000010 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610
Pfam:PF14215 EMBL:AC145364 EnsemblPlants:LOC_Os11g15210.1
KEGG:dosa:Os11t0258700-00 Uniprot:Q53L62
Length = 458
Score = 220 (82.5 bits), Expect = 1.7e-17, Sum P(2) = 1.7e-17
Identities = 71/209 (33%), Positives = 102/209 (48%)
Query: 376 SSFASWKK---GGLVSCKKQRDGVS-QKLLKKILFEVPRIINYRLLESSEDNHIKDDVSR 431
SSF +WK+ V G QKLLKK + +N + S D S
Sbjct: 184 SSFVAWKRTPDSDEVQAVPLISGEPPQKLLKKAVAGAGAWMNNA--DGSAATMTTDQGSS 241
Query: 432 LEAEETATNHVKSERRQRGKLNERFVILKSMVPSVSKFDKVSILDDTIEYVQELERKVKE 491
++ NHV SERR+R KL E F+ILKS+VPS+ K DK SIL +TI Y++ELE++V+E
Sbjct: 242 IK------NHVMSERRRREKLKEMFLILKSVVPSIHKVDKASILAETIAYLKELEKRVEE 295
Query: 492 LESCRAK----LEANYDN---XXXXXXXXXXXXDIYESEPEF---ERFATADNINVSI-N 540
LES +E PE ER N+NV+I +
Sbjct: 296 LESSSQPSPRPMETTRRRCCKSTGKKVSAGARAKRKAPAPEDTDGERRHCVSNVNVTIMD 355
Query: 541 EKDVQIEIKCPWREGMLLEIMDAISNLHL 569
K++ +E++C W+E ++ + DAI + L
Sbjct: 356 NKELLLELQCQWKELLMTRVFDAIKGVSL 384
Score = 66 (28.3 bits), Expect = 1.7e-17, Sum P(2) = 1.7e-17
Identities = 39/171 (22%), Positives = 66/171 (38%)
Query: 156 SRSLLAKTVVCFPHXXXXXXXXXXXX-XXXXPGFIQHIKTSFMEIPCPMISGNSSSGAGN 214
S+S KT+VC P P + I S + P P + +S +G +
Sbjct: 13 SQSASIKTIVCVPFIMHGVLELGTTDPVSEDPALVDRITASLWDTP-PRAAFSSEAGVAD 71
Query: 215 MRDDKDLACAALCSQNLDTTMVP-------VVGYEVLEMASPDNNGSSGIKHNQPADDSF 267
+ +DL + TTMVP V G EV E S +N I + +
Sbjct: 72 IVVFEDLDHGNTAVE-ATTTMVPGEPEPHAVAGGEVAECESNAHNDLEQITMDDIGELYS 130
Query: 268 MVEGINGVASQVQSWQFMDDEFSN--CVHSVNSSDSISQTLVDAAKCVSAS 316
+ E ++ + SW + D +S+ V + ++D + +V A + S
Sbjct: 131 LCEELDVLDDDSSSW--VADPWSSFQLVPTAEATD-VDDAVVAALGAIDGS 178
>UNIPROTKB|Q657A4 [details] [associations]
symbol:P0022F12.30 "Regulatory protein B-Peru-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP002908 EMBL:AP003310 EnsemblPlants:LOC_Os01g39580.1
Uniprot:Q657A4
Length = 370
Score = 231 (86.4 bits), Expect = 7.3e-17, Sum P(2) = 7.3e-17
Identities = 55/139 (39%), Positives = 81/139 (58%)
Query: 440 NHVKSERRQRGKLNERFVILKSMVPSVSKFDKVSILDDTIEYVQELERKVKELESCR--- 496
NHV SERR+R KLNE F+ILKS+VPS+ K DK SIL +TI Y++ELER+V+ELES +
Sbjct: 188 NHVMSERRRREKLNEMFLILKSLVPSIDKVDKASILSETIAYLKELERRVQELESGKKVS 247
Query: 497 --AKLEANYDNXXXXXXXXXXXXDIYESEP---EFERFATADNINVSINEKD-VQIEIKC 550
AK + + + E + T ++ V + +KD + +E++C
Sbjct: 248 RPAKRKPCSETIIGGGGGGGGAGAVKEHHHWVLSESQEGTPSDVRVIVMDKDELHLEVQC 307
Query: 551 PWREGMLLEIMDAISNLHL 569
W+E M+ + DAI +L L
Sbjct: 308 RWKELMMTRVFDAIKSLRL 326
Score = 40 (19.1 bits), Expect = 7.3e-17, Sum P(2) = 7.3e-17
Identities = 10/27 (37%), Positives = 13/27 (48%)
Query: 186 PGFIQHIKTSFMEIPCPMISGNS-SSG 211
P + I T+F E+ P S SSG
Sbjct: 22 PNVVNRITTAFWELQLPACSDEPISSG 48
>TAIR|locus:2130619 [details] [associations]
symbol:AT4G16430 "AT4G16430" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:Z97341 EMBL:AL161544
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238207
InterPro:IPR025610 Pfam:PF14215 EMBL:AF251688 EMBL:AF428368
EMBL:AY057626 EMBL:BT002301 IPI:IPI00546344 PIR:A71431
RefSeq:NP_193376.1 UniGene:At.33082 UniGene:At.4413
ProteinModelPortal:O23487 SMR:O23487 STRING:O23487 PaxDb:O23487
PRIDE:O23487 EnsemblPlants:AT4G16430.1 GeneID:827337
KEGG:ath:AT4G16430 TAIR:At4g16430 eggNOG:NOG246663
InParanoid:O23487 OMA:RSMSINF PhylomeDB:O23487
ProtClustDB:CLSN2685658 Genevestigator:O23487 Uniprot:O23487
Length = 467
Score = 158 (60.7 bits), Expect = 2.3e-14, Sum P(2) = 2.3e-14
Identities = 27/59 (45%), Positives = 46/59 (77%)
Query: 436 ETATNHVKSERRQRGKLNERFVILKSMVPSVSKFDKVSILDDTIEYVQELERKVKELES 494
E A NHV++ER++R KLN+RF L+++VP++SK DK S+L D I Y+ ++++K++ E+
Sbjct: 316 EEALNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLADAITYITDMQKKIRVYET 374
Score = 104 (41.7 bits), Expect = 2.3e-14, Sum P(2) = 2.3e-14
Identities = 43/154 (27%), Positives = 67/154 (43%)
Query: 15 SLKKQLALAVRSIQWSYAIFWTISDTQPG---VLEWGDGYYNGDIKTRKTIQSVELSSNQ 71
+L++ L V W YA+FW S+ VL WGDG+ + +K S E S Q
Sbjct: 49 NLQQGLRHVVEGSDWDYALFWLASNVNSSDGCVLIWGDGH----CRVKKGA-SGEDYSQQ 103
Query: 72 LGLQRSEQLRELYESLSAGESNPQAASKRPSAALSPEDLTDTEWYYLVCMSFVFNIGEGL 131
++R LR+L+ S + + + S AL TD + +YL + F F
Sbjct: 104 DEIKR-RVLRKLHLSFVGSDEDHRLVK---SGAL-----TDLDMFYLASLYFSFRCDTNK 154
Query: 132 PGRA--LANNQPIWLCNAQYADSKVFSRSLLAKT 163
G A + +P+W + S RS LA++
Sbjct: 155 YGPAGTYVSGKPLWAADLPSCLSYYRVRSFLARS 188
Score = 39 (18.8 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 12/39 (30%), Positives = 23/39 (58%)
Query: 382 KKGGLVSCKKQRDGVSQKLLKKI-LFEVPRIINYRLLES 419
KKG Q+D + +++L+K+ L V ++RL++S
Sbjct: 92 KKGASGEDYSQQDEIKRRVLRKLHLSFVGSDEDHRLVKS 130
>TAIR|locus:2137574 [details] [associations]
symbol:AT4G37850 "AT4G37850" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL035709
EMBL:AL161592 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000240300
ProtClustDB:CLSN2690865 EMBL:AF488567 IPI:IPI00544527 PIR:T06032
RefSeq:NP_195498.3 UniGene:At.31223 ProteinModelPortal:Q9T072
SMR:Q9T072 EnsemblPlants:AT4G37850.1 GeneID:829941
KEGG:ath:AT4G37850 TAIR:At4g37850 eggNOG:NOG262524
InParanoid:Q8S3F0 PhylomeDB:Q9T072 Genevestigator:Q9T072
Uniprot:Q9T072
Length = 328
Score = 180 (68.4 bits), Expect = 5.1e-11, P = 5.1e-11
Identities = 45/140 (32%), Positives = 76/140 (54%)
Query: 435 EETATNHVKSERRQRGKLNERFVILKSMVPSVSKFDKVSILDDTIEYVQELERKVKELES 494
+ A +H+ +ER++R KL +RFV L ++VP + K DK S+L D +++++ L+ +V ELE
Sbjct: 147 QSNAQDHIIAERKRREKLTQRFVALSALVPGLKKMDKASVLGDALKHIKYLQERVGELEE 206
Query: 495 CRAKLEANYDNXXXXXXXXXXXXD---IYESEPEFERFATAD--NINVSINEKDVQIEIK 549
K E ++ D + S E + F+ D I V +++DV I+I
Sbjct: 207 --QKKERRLESMVLVKKSKLILDDNNQSFSSSCE-DGFSDLDLPEIEVRFSDEDVLIKIL 263
Query: 550 CPWREGMLLEIMDAISNLHL 569
C ++G L +IM I LH+
Sbjct: 264 CEKQKGHLAKIMAEIEKLHI 283
>TAIR|locus:2062225 [details] [associations]
symbol:AT2G22750 "AT2G22750" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AC005617 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC006340
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AF488562 EMBL:DQ446549
EMBL:DQ653015 IPI:IPI00538506 IPI:IPI00846694 PIR:D84616
RefSeq:NP_001077944.1 RefSeq:NP_179860.2 UniGene:At.39395
ProteinModelPortal:Q1PF17 SMR:Q1PF17 EnsemblPlants:AT2G22750.2
GeneID:816805 KEGG:ath:AT2G22750 TAIR:At2g22750 eggNOG:NOG266714
HOGENOM:HOG000240300 InParanoid:Q8S3F3 OMA:FDISIIA PhylomeDB:Q1PF17
ProtClustDB:CLSN2690865 Genevestigator:Q1PF17 Uniprot:Q1PF17
Length = 305
Score = 178 (67.7 bits), Expect = 6.3e-11, P = 6.3e-11
Identities = 44/147 (29%), Positives = 79/147 (53%)
Query: 430 SRLEAEETATNHVKSERRQRGKLNERFVILKSMVPSVSKFDKVSILDDTIEYVQELERKV 489
S ++ A +H+ +ER++R KL +RFV L +++P + K DK S+L D I++++ L+ V
Sbjct: 116 SLTRSQSNAQDHILAERKRREKLTQRFVALSALIPGLKKMDKASVLGDAIKHIKYLQESV 175
Query: 490 KELESCRAKLEANYDNXXXXXXXXXXXXDIYE----SEPEFERFATADN---INVSINEK 542
KE E K E ++ + ++ S + R +++ N I V ++ K
Sbjct: 176 KEYEE--QKKEKTMESVVLVKKSSLVLDENHQPSSSSSSDGNRNSSSSNLPEIEVRVSGK 233
Query: 543 DVQIEIKCPWREGMLLEIMDAISNLHL 569
DV I+I C ++G +++IM I L L
Sbjct: 234 DVLIKILCEKQKGNVIKIMGEIEKLGL 260
>UNIPROTKB|Q75GI1 [details] [associations]
symbol:OSJNBa0013A09.16 "Putative transcription factor"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0003677 EMBL:DP000009
EMBL:AP008209 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC145380
EMBL:AC135228 EMBL:AK120539 RefSeq:NP_001051131.1 UniGene:Os.7441
EnsemblPlants:LOC_Os03g51580.1 GeneID:4333965 KEGG:osa:4333965
OMA:DSCITEQ Uniprot:Q75GI1
Length = 359
Score = 170 (64.9 bits), Expect = 9.3e-10, P = 9.3e-10
Identities = 57/235 (24%), Positives = 103/235 (43%)
Query: 369 FQNHSQESSFASWKKGGLVSCKKQRDGVSQKLLK---KILFEVPRIINYRLLESSEDNHI 425
F H+ ++ A++ G G S LK ++ R ++ S D +
Sbjct: 101 FGGHADAAAAAAFASAGQAQSAPYYGGASAAALKPKQELDAAAAPFSQARPVKRSYDAMV 160
Query: 426 KDDVSRLEAEETAT------NHVKSERRQRGKLNERFVILKSMVPSVSKFDKVSILDDTI 479
DV++ A + H+ +ER++R KL++RF+ L +VP + K DK S+L D I
Sbjct: 161 AADVAKAPAAAASRPASQNQEHILAERKRREKLSQRFIALSKIVPGLKKMDKASVLGDAI 220
Query: 480 EYVQELERKVKELESCRAKLEANYDNXXXXXXXXXXXXDIYESEPEFERF-ATAD--NIN 536
+YV++L+ +VK LE + D + F+ ATA I
Sbjct: 221 KYVKQLQDQVKGLEEEARRRPVEAAVLVKKSQLSADDDDGSSCDENFDGGEATAGLPEIE 280
Query: 537 VSINEKDVQIEIKCPWREGMLLEIMDAISNLHLYSHRFNHPPIEAFYLLLSKVST 591
++E+ V ++I C R+G L+ + + + L N P + L ++ ++T
Sbjct: 281 ARVSERTVLVKIHCENRKGALITALSEVETIGLTIMNTNVLPFTSSSLDITIMAT 335
>TAIR|locus:2155725 [details] [associations]
symbol:bHLH093 "AT5G65640" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0007275
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB026639 HOGENOM:HOG000029066 EMBL:AF488621 EMBL:BT025665
EMBL:AK229018 EMBL:AY085134 IPI:IPI00533579 IPI:IPI00785991
RefSeq:NP_001078801.1 RefSeq:NP_569014.1 UniGene:At.28897
ProteinModelPortal:Q9LSL1 SMR:Q9LSL1 EnsemblPlants:AT5G65640.1
GeneID:836690 KEGG:ath:AT5G65640 TAIR:At5g65640 eggNOG:NOG245311
InParanoid:Q9LSL1 OMA:PLMESDQ PhylomeDB:Q9LSL1
ProtClustDB:CLSN2686406 Genevestigator:Q9LSL1 Uniprot:Q9LSL1
Length = 351
Score = 167 (63.8 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 40/144 (27%), Positives = 75/144 (52%)
Query: 426 KDDVSRLEAEETATNHVKSERRQRGKLNERFVILKSMVPSVSKFDKVSILDDTIEYVQEL 485
K +LE + + ++ +ERR+R +LN+R +L+S+VP +SK D+ SIL D I+Y++EL
Sbjct: 166 KKKSKKLEGQPS--KNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDAIDYMKEL 223
Query: 486 ERKVKELESCRAKLEANYDNXXXXXXXXXXXXDIYESEPEFERFATADNINVSINEKDVQ 545
K+ +L+ + E N D+ +EP + + ++D +
Sbjct: 224 LDKINKLQD--EEQELGNSNNSHHSKLFGDLKDLNANEPLVRN---SPKFEIDRRDEDTR 278
Query: 546 IEIKCPWREGMLLEIMDAISNLHL 569
++I C + G+LL ++ + L L
Sbjct: 279 VDICCSPKPGLLLSTVNTLETLGL 302
>TAIR|locus:2046198 [details] [associations]
symbol:FRU "AT2G28160" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010039 "response to iron ion" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0034756 "regulation of iron ion
transport" evidence=IMP] [GO:0071281 "cellular response to iron
ion" evidence=IEP] [GO:0071369 "cellular response to ethylene
stimulus" evidence=IEP] [GO:0071732 "cellular response to nitric
oxide" evidence=IEP] [GO:0000041 "transition metal ion transport"
evidence=RCA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0071281 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:AC005851 GO:GO:0071732 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0071369 EMBL:AF488570 EMBL:BT026446 IPI:IPI00547189
PIR:E84681 RefSeq:NP_850114.1 UniGene:At.43510
ProteinModelPortal:Q0V7X4 SMR:Q0V7X4 IntAct:Q0V7X4 STRING:Q0V7X4
PaxDb:Q0V7X4 PRIDE:Q0V7X4 EnsemblPlants:AT2G28160.1 GeneID:817362
KEGG:ath:AT2G28160 TAIR:At2g28160 eggNOG:NOG236355
HOGENOM:HOG000006047 InParanoid:Q0V7X4 OMA:NLKLWIT PhylomeDB:Q0V7X4
ProtClustDB:CLSN2690963 Genevestigator:Q0V7X4 GO:GO:0034756
Uniprot:Q0V7X4
Length = 318
Score = 162 (62.1 bits), Expect = 5.2e-09, P = 5.2e-09
Identities = 48/182 (26%), Positives = 86/182 (47%)
Query: 418 ESSEDNHIKDDVSRLEAEETATNHVK--------SERRQRGKLNERFVILKSMVPSVSKF 469
E ED + DD S T K SERR+RG++ ++ L+S+VP+++K
Sbjct: 101 EDEEDYNDGDDSSATTTNNDGTRKTKTDRSRTLISERRRRGRMKDKLYALRSLVPNITKM 160
Query: 470 DKVSILDDTIEYVQELERKVKELESCRAKLEANYDNXXXXXXXXXXXXDIYE----SEPE 525
DK SI+ D + YVQEL+ + K+L+S A LEA+ ++ + P
Sbjct: 161 DKASIVGDAVLYVQELQSQAKKLKSDIAGLEASLNSTGGYQEHAPDAQKTQPFRGINPPA 220
Query: 526 FERFATADNINVSINEKDVQIEIKCPWREGM---LLEIMDAISNLHLYSHRFNHPPIEAF 582
++ D I V EK + + C EG+ L + ++++++ + + + P + +
Sbjct: 221 SKKIIQMDVIQVE--EKGFYVRLVCNKGEGVAPSLYKSLESLTSFQVQNSNLSSPSPDTY 278
Query: 583 YL 584
L
Sbjct: 279 LL 280
>TAIR|locus:2134583 [details] [associations]
symbol:AT4G00870 "AT4G00870" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AL161472 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238207 InterPro:IPR025610
Pfam:PF14215 EMBL:AF013294 EMBL:AJ519812 IPI:IPI00537799 PIR:T01559
RefSeq:NP_567195.1 UniGene:At.34506 ProteinModelPortal:O23090
SMR:O23090 EnsemblPlants:AT4G00870.1 GeneID:827990
KEGG:ath:AT4G00870 TAIR:At4g00870 eggNOG:NOG285642
InParanoid:O23090 OMA:SIECELM PhylomeDB:O23090
ProtClustDB:CLSN2917469 Genevestigator:O23090 Uniprot:O23090
Length = 423
Score = 145 (56.1 bits), Expect = 6.1e-09, Sum P(2) = 6.1e-09
Identities = 24/55 (43%), Positives = 42/55 (76%)
Query: 440 NHVKSERRQRGKLNERFVILKSMVPSVSKFDKVSILDDTIEYVQELERKVKELES 494
+HV++E+++R KLN RF L+++VP VS+ DK S+L D + Y++ L+ K+ +LE+
Sbjct: 249 SHVEAEKQRREKLNHRFYALRAIVPKVSRMDKASLLSDAVSYIESLKSKIDDLET 303
Score = 64 (27.6 bits), Expect = 6.1e-09, Sum P(2) = 6.1e-09
Identities = 23/85 (27%), Positives = 39/85 (45%)
Query: 16 LKKQLALAVRSI--QWSYAIFWT-ISDTQP--GVLEWGDGYY----NGDIKTRKTIQSVE 66
L+++L V + +W+Y IFW + D Q L W DG++ N + + T S+E
Sbjct: 35 LQQKLRFVVETSPDRWAYVIFWQKMFDDQSDRSYLVWVDGHFCGNKNNNSQENYTTNSIE 94
Query: 67 LSSNQLGLQRSEQLRELYESLSAGE 91
+L + + L Y + GE
Sbjct: 95 C---ELMMDGGDDLELFYAASFYGE 116
>UNIPROTKB|Q2QLR0 [details] [associations]
symbol:LOC_Os12g43620 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:DP000011
KEGG:dosa:Os12t0632600-00 Gramene:Q2QLR0 OMA:TNVMPFP Uniprot:Q2QLR0
Length = 338
Score = 162 (62.1 bits), Expect = 6.3e-09, P = 6.3e-09
Identities = 36/130 (27%), Positives = 65/130 (50%)
Query: 440 NHVKSERRQRGKLNERFVILKSMVPSVSKFDKVSILDDTIEYVQELERKVKELESCRAKL 499
+H+ +ERR+R K+N+RF+ L +++P + K DK +IL D ++YV+EL+ KVK LE
Sbjct: 167 DHIIAERRRREKINQRFIELSTVIPGLKKMDKATILGDAVKYVKELQEKVKTLEE----- 221
Query: 500 EANYDNXXXXXXXXXXXXDIYESEPEFERFATADNINVSINEKDVQIEIKCPWREGMLLE 559
E + + + I V + E+ V + ++C G+L+
Sbjct: 222 EDGGGRPAAMVVRKSSCSGRQSAAGDGDGEGRVPEIEVRVWERSVLVRVQCGNSRGLLVR 281
Query: 560 IMDAISNLHL 569
++ + L L
Sbjct: 282 LLSEVEELRL 291
>TAIR|locus:2062235 [details] [associations]
symbol:NAI1 "AT2G22770" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IMP;TAS]
[GO:0007029 "endoplasmic reticulum organization" evidence=IMP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AC005617 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000240300 ProtClustDB:CLSN2690866
EMBL:AF488564 EMBL:AK176248 IPI:IPI00531737 PIR:F84616
RefSeq:NP_850031.2 UniGene:At.43434 ProteinModelPortal:Q8S3F1
SMR:Q8S3F1 STRING:Q8S3F1 PRIDE:Q8S3F1 EnsemblPlants:AT2G22770.1
GeneID:816807 KEGG:ath:AT2G22770 TAIR:At2g22770 eggNOG:NOG310015
InParanoid:Q8S3F1 OMA:TDEYLID PhylomeDB:Q8S3F1
Genevestigator:Q8S3F1 Uniprot:Q8S3F1
Length = 320
Score = 161 (61.7 bits), Expect = 6.9e-09, P = 6.9e-09
Identities = 38/144 (26%), Positives = 75/144 (52%)
Query: 441 HVKSERRQRGKLNERFVILKSMVPSVSKFDKVSILDDTIEYVQELERKVKELESCRA--- 497
HV +ER++R KLNER + L +++P + K DK ++L+D I+++++L+ +VK+LE R
Sbjct: 133 HVLAERKRRQKLNERLIALSALLPGLKKTDKATVLEDAIKHLKQLQERVKKLEEERVVTK 192
Query: 498 KLEAN---------Y--DNXXXXXXXXXXXXDIYESEPEFERFA-TADNINVSINEKDVQ 545
K++ + Y D+ + S E F T I ++++D+
Sbjct: 193 KMDQSIILVKRSQVYLDDDSSSYSSTCSAASPLSSSSDEVSIFKQTMPMIEARVSDRDLL 252
Query: 546 IEIKCPWREGMLLEIMDAISNLHL 569
I + C +G +++I+ ++ L
Sbjct: 253 IRVHCEKNKGCMIKILSSLEKFRL 276
>UNIPROTKB|Q8LSP3 [details] [associations]
symbol:OJ1203D03.3 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
EMBL:DP000009 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC099732
EnsemblPlants:LOC_Os03g12760.1 KEGG:dosa:Os03t0229100-00
HOGENOM:HOG000239880 OMA:DSCLNIT Uniprot:Q8LSP3
Length = 451
Score = 164 (62.8 bits), Expect = 7.4e-09, P = 7.4e-09
Identities = 40/130 (30%), Positives = 68/130 (52%)
Query: 438 ATNHVKSERRQRGKLNERFVILKSMVPSVSKFDKVSILDDTIEYVQELERKVKELES-CR 496
A HV +ER++R KL ++FV L ++VP + K DK+S+L TI+YV++LE KVK LE R
Sbjct: 285 AQEHVIAERKRREKLQQQFVALATIVPGLKKTDKISLLGSTIDYVKQLEEKVKALEEGSR 344
Query: 497 AKLEAN--YDNXXXXXXXXXXXXDIYESEPEFERFATADNINVSINEKDVQIEIKCPWRE 554
E +++ + +++ + SI+ V ++I C R
Sbjct: 345 RTAEPTTAFESKCRITVDDDDGGSASSGTDDGSSSSSSPTVEASIHGNTVLLKICCKERR 404
Query: 555 GMLLEIMDAI 564
G+L+ I+ +
Sbjct: 405 GLLVMILSEL 414
>UNIPROTKB|Q84R79 [details] [associations]
symbol:OSJNBb0113I20.1 "Putative ammonium transporter"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P22415 EMBL:AC116369 ProteinModelPortal:Q84R79 Gramene:Q84R79
Uniprot:Q84R79
Length = 301
Score = 159 (61.0 bits), Expect = 9.5e-09, P = 9.5e-09
Identities = 40/129 (31%), Positives = 64/129 (49%)
Query: 441 HVKSERRQRGKLNERFVILKSMVPSVSKFDKVSILDDTIEYVQELERKVKELESCRAKLE 500
HV +ER++R K+N+RF+ L +++P + K DK +IL D Y++EL+ K+K LE A
Sbjct: 131 HVVAERKRREKINQRFMELSAVIPKLKKMDKATILSDAASYIRELQEKLKALEEQAA--- 187
Query: 501 ANYDNXXXXXXXXXXXXDIYESEPEFERFATADNINVSINEKDVQIEIKCPWREGMLLEI 560
A + PE E + N NV V + I C EG+++ I
Sbjct: 188 ARVTEAAMATPSPARAMNHLPVPPEIEVRCSPTN-NV------VMVRIHCENGEGVIVRI 240
Query: 561 MDAISNLHL 569
+ + +HL
Sbjct: 241 LAEVEEIHL 249
>UNIPROTKB|Q8H8E4 [details] [associations]
symbol:OJ1006F06.1 "Putative bHLH transcription protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000029066 EMBL:AC099399 ProteinModelPortal:Q8H8E4
STRING:Q8H8E4 Gramene:Q8H8E4 Uniprot:Q8H8E4
Length = 430
Score = 161 (61.7 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 44/141 (31%), Positives = 71/141 (50%)
Query: 431 RLEAEETATNHVKSERRQRGKLNERFVILKSMVPSVSKFDKVSILDDTIEYVQELERKVK 490
R + T + ++ +ERR+R +LN+R +L+S+VP +SK D+ SIL DTI+YV+EL ++K
Sbjct: 173 RSKLHGTPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDTIDYVKELTERIK 232
Query: 491 ELESCRAKLEANYD--NXXXXXXXXXXXXDIYESEPEFERFATADNINVSINEKDVQIEI 548
LE D N + + +F+ +N + +IEI
Sbjct: 233 TLEEEIGVTPEELDLLNTMKDSSSGNNNEMLVRNSTKFD----VENRGSG----NTRIEI 284
Query: 549 KCPWREGMLLEIMDAISNLHL 569
CP G+LL + A+ L L
Sbjct: 285 CCPANPGVLLSTVSALEVLGL 305
>TAIR|locus:2062230 [details] [associations]
symbol:AT2G22760 "AT2G22760" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AC005617 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC006340
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000240300
EMBL:AF488563 EMBL:DQ446550 EMBL:DQ653016 IPI:IPI00530407
PIR:E84616 RefSeq:NP_179861.2 UniGene:At.39393
ProteinModelPortal:Q1PF16 SMR:Q1PF16 IntAct:Q1PF16 PRIDE:Q1PF16
EnsemblPlants:AT2G22760.1 GeneID:816806 KEGG:ath:AT2G22760
TAIR:At2g22760 eggNOG:NOG292366 InParanoid:Q1PF16 OMA:GCMINIL
PhylomeDB:Q1PF16 ProtClustDB:CLSN2690866 Genevestigator:Q1PF16
Uniprot:Q1PF16
Length = 295
Score = 154 (59.3 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 40/140 (28%), Positives = 68/140 (48%)
Query: 438 ATNHVKSERRQRGKLNERFVILKSMVPSVSKFDKVSILDDTIEYVQELERKVKELESCRA 497
A HV +ER++R KL+E+F+ L +++P + K DKV+ILDD I +++L+ +++ L
Sbjct: 117 AKEHVLAERKRREKLSEKFIALSALLPGLKKADKVTILDDAISRMKQLQEQLRTL----- 171
Query: 498 KLEANYDNXXXXXXXXXXXXDIYESEPEFE-------RFATA-DNINVSINEKDVQIEIK 549
K E ++ EP F A I I++ D+ I I
Sbjct: 172 KEEKEATRQMESMILVKKSKVFFDEEPNLSCSPSVHIEFDQALPEIEAKISQNDILIRIL 231
Query: 550 CPWREGMLLEIMDAISNLHL 569
C +G ++ I++ I N L
Sbjct: 232 CEKSKGCMINILNTIENFQL 251
>UNIPROTKB|Q6ZBI4 [details] [associations]
symbol:P0623F08.11 "Phaseolin G-box binding protein
PG1-like" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 HSSP:P22415 EMBL:AP003914 EMBL:AP004632
EnsemblPlants:LOC_Os08g43070.1 KEGG:dosa:Os08t0543700-00
OMA:PVISHVE Uniprot:Q6ZBI4
Length = 263
Score = 149 (57.5 bits), Expect = 5.4e-08, Sum P(2) = 5.4e-08
Identities = 27/54 (50%), Positives = 42/54 (77%)
Query: 441 HVKSERRQRGKLNERFVILKSMVPSVSKFDKVSILDDTIEYVQELERKVKELES 494
HV++ER++R KLN RF L++ VP+VS+ DK S+L D ++Y+ EL R+V+ LE+
Sbjct: 95 HVEAERQRREKLNRRFCELRAAVPTVSRMDKASLLADAVDYIAELRRRVERLEA 148
Score = 40 (19.1 bits), Expect = 5.4e-08, Sum P(2) = 5.4e-08
Identities = 10/26 (38%), Positives = 12/26 (46%)
Query: 294 HSVNSSDSISQTLVDAAKCVSASKDD 319
H D+ + L AA SAS DD
Sbjct: 37 HDELDKDAAASALAAAAASQSASNDD 62
>TAIR|locus:2090847 [details] [associations]
symbol:ICE1 "AT3G26744" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA;TAS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0009409 "response to cold" evidence=IEP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA;IDA] [GO:0050826 "response to freezing"
evidence=RCA;IMP] [GO:0010440 "stomatal lineage progression"
evidence=IMP] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0009410 "response to xenobiotic
stimulus" evidence=RCA] [GO:0009640 "photomorphogenesis"
evidence=RCA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0009909 "regulation of flower development"
evidence=RCA] [GO:0009933 "meristem structural organization"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010182 "sugar mediated signaling pathway" evidence=RCA]
[GO:0010228 "vegetative to reproductive phase transition of
meristem" evidence=RCA] [GO:0010388 "cullin deneddylation"
evidence=RCA] [GO:0016567 "protein ubiquitination" evidence=RCA]
[GO:0016571 "histone methylation" evidence=RCA] [GO:0016579
"protein deubiquitination" evidence=RCA] [GO:0019915 "lipid
storage" evidence=RCA] [GO:0043687 "post-translational protein
modification" evidence=RCA] [GO:0048522 "positive regulation of
cellular process" evidence=RCA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0045893 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0050826 EMBL:AB016889 GO:GO:0010440
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AB026648 EMBL:AY195621
EMBL:AY079016 EMBL:BT020379 EMBL:AK228443 IPI:IPI00518051
IPI:IPI00656676 RefSeq:NP_001030774.1 RefSeq:NP_001030776.2
RefSeq:NP_189309.2 UniGene:At.25302 ProteinModelPortal:Q9LSE2
SMR:Q9LSE2 STRING:Q9LSE2 PaxDb:Q9LSE2 PRIDE:Q9LSE2
EnsemblPlants:AT3G26744.1 EnsemblPlants:AT3G26744.2
EnsemblPlants:AT3G26744.4 GeneID:822287 KEGG:ath:AT3G26744
TAIR:At3g26744 eggNOG:NOG236974 HOGENOM:HOG000085036
InParanoid:Q9LSE2 OMA:NSESSGM PhylomeDB:Q9LSE2
ProtClustDB:CLSN2690572 Genevestigator:Q9LSE2 GermOnline:AT3G26744
Uniprot:Q9LSE2
Length = 494
Score = 136 (52.9 bits), Expect = 1.4e-07, Sum P(3) = 1.4e-07
Identities = 24/54 (44%), Positives = 42/54 (77%)
Query: 441 HVKSERRQRGKLNERFVILKSMVPSVSKFDKVSILDDTIEYVQELERKVKELES 494
++ +ERR+R KLN+R +L+S+VP +SK D+ SIL D I+Y++EL +++ +L +
Sbjct: 308 NLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHN 361
Score = 54 (24.1 bits), Expect = 1.4e-07, Sum P(3) = 1.4e-07
Identities = 14/36 (38%), Positives = 20/36 (55%)
Query: 535 INVSINE-KDVQIEIKCPWREGMLLEIMDAISNLHL 569
+ V + E + V I + C R G+LL M A+ NL L
Sbjct: 411 VEVRLREGRAVNIHMFCGRRPGLLLATMKALDNLGL 446
Score = 48 (22.0 bits), Expect = 1.4e-07, Sum P(3) = 1.4e-07
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 318 DDKKIGHCLQEVEECNPTELTSLDP 342
D+ + H + C+P++ SLDP
Sbjct: 79 DNLLLQHSIDSSSSCSPSQAFSLDP 103
>TAIR|locus:2142419 [details] [associations]
symbol:AT5G10570 "AT5G10570" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AL353995 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AF488594 IPI:IPI00529696 PIR:T49982
RefSeq:NP_196619.1 UniGene:At.32362 ProteinModelPortal:Q9LXA9
SMR:Q9LXA9 EnsemblPlants:AT5G10570.1 GeneID:830922
KEGG:ath:AT5G10570 TAIR:At5g10570 eggNOG:NOG310833
HOGENOM:HOG000029066 InParanoid:Q9LXA9 OMA:SSAFDYP PhylomeDB:Q9LXA9
ProtClustDB:CLSN2914918 Genevestigator:Q9LXA9 Uniprot:Q9LXA9
Length = 315
Score = 147 (56.8 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 38/140 (27%), Positives = 71/140 (50%)
Query: 430 SRLEAEETATNHVKSERRQRGKLNERFVILKSMVPSVSKFDKVSILDDTIEYVQELERKV 489
S + E + ++ +ERR+R +LN+R +L+S+VP ++K D+ SIL D I+Y++EL K+
Sbjct: 141 SNKKLEGQPSKNLMAERRRRKRLNDRLSLLRSIVPKITKMDRTSILGDAIDYMKELLDKI 200
Query: 490 KELESCRAKLEANYDNXXXXXXXXXXXXDIYESEPEFERFATADNINVSINEKDVQIEIK 549
+L+ +L +N + + +FE V E + I+I
Sbjct: 201 NKLQEDEQELGSN-----SHLSTLITNESMVRNSLKFE---------VDQREVNTHIDIC 246
Query: 550 CPWREGMLLEIMDAISNLHL 569
CP + G+++ + + L L
Sbjct: 247 CPTKPGLVVSTVSTLETLGL 266
>TAIR|locus:2123954 [details] [associations]
symbol:AT4G29930 "AT4G29930" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AL161575 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AK117730 EMBL:BT005869 EMBL:AY568654
EMBL:AJ630482 EMBL:AK176201 EMBL:AK176276 EMBL:AK176674
EMBL:AK222212 EMBL:AK228201 EMBL:AF488569 IPI:IPI00516806
IPI:IPI00544272 IPI:IPI00546879 IPI:IPI00892082
RefSeq:NP_001031752.1 RefSeq:NP_001078471.1 RefSeq:NP_001119080.1
RefSeq:NP_194722.2 UniGene:At.44068 ProteinModelPortal:Q700E3
SMR:Q700E3 IntAct:Q700E3 EnsemblPlants:AT4G29930.3 GeneID:829116
KEGG:ath:AT4G29930 TAIR:At4g29930 eggNOG:NOG294060
HOGENOM:HOG000006429 InParanoid:Q8GYC3 OMA:PIENIGE PhylomeDB:Q700E3
ProtClustDB:CLSN2680169 Genevestigator:Q700E3 Uniprot:Q700E3
Length = 263
Score = 143 (55.4 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 29/64 (45%), Positives = 47/64 (73%)
Query: 438 ATNHVKSERRQRGKLNERFVILKSMVPSVSKFDKVSILDDTIEYVQELERKVKELESCRA 497
++ +V SER +R KLN+R L+S+VP++SK DK S++ D+I+Y+QEL + K LE+
Sbjct: 52 SSKNVVSERNRRQKLNQRLFALRSVVPNISKLDKASVIKDSIDYMQELIDQEKTLEAEIR 111
Query: 498 KLEA 501
+LE+
Sbjct: 112 ELES 115
>UNIPROTKB|Q84R60 [details] [associations]
symbol:OSJNBb0113I20.8 "Putative ammonium transporter"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P22415 EMBL:AC116369 ProteinModelPortal:Q84R60 Gramene:Q84R60
Uniprot:Q84R60
Length = 353
Score = 146 (56.5 bits), Expect = 4.3e-07, P = 4.3e-07
Identities = 24/56 (42%), Positives = 41/56 (73%)
Query: 438 ATNHVKSERRQRGKLNERFVILKSMVPSVSKFDKVSILDDTIEYVQELERKVKELE 493
A H+ +ER++R K+N+RF+ L +++P + K DK +IL D + YV+E++ K+ ELE
Sbjct: 190 AQEHIIAERKRREKINQRFIELSTVIPGLKKMDKATILSDAVRYVKEMQEKLSELE 245
>UNIPROTKB|Q2R3F6 [details] [associations]
symbol:Os11g0523700 "Helix-loop-helix DNA-binding domain
containing protein, expressed" species:39947 "Oryza sativa Japonica
Group" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0003677 EMBL:DP000010 EMBL:AP008217 GO:GO:0050826
GO:GO:0010440 Gene3D:4.10.280.10 SUPFAM:SSF47459
RefSeq:NP_001067987.2 UniGene:Os.56356
EnsemblPlants:LOC_Os11g32100.1 GeneID:4350609 KEGG:osa:4350609
OMA:DGKDSNA Uniprot:Q2R3F6
Length = 524
Score = 149 (57.5 bits), Expect = 6.6e-07, Sum P(2) = 6.6e-07
Identities = 52/163 (31%), Positives = 78/163 (47%)
Query: 418 ESSEDNHIKDDVSRLEAEETATNHVKSERRQRGKLNERFVILKSMVPSVSKFDKVSILDD 477
ES+ ++ + D + A N + +ERR+R KLN+R +L+S+VP +SK D+ SIL D
Sbjct: 315 ESNANSTVTGDGKGKKKGMPAKN-LMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGD 373
Query: 478 TIEYVQELERKVK----ELESCRA--KLEANYDNXXXXXXXXXXXXDIYESE--PEFERF 529
IEY++EL +K+ ELES A L + + E P
Sbjct: 374 AIEYLKELLQKINDLQNELESSPATSSLPPTPTSFHPLTPTLPTLPSRIKEEICPSALPS 433
Query: 530 ATADN--INVSINE-KDVQIEIKCPWREGMLLEIMDAISNLHL 569
T + V + E + V I + C R G+LL M A+ L L
Sbjct: 434 PTGQQPRVEVRLREGRAVNIHMFCARRPGLLLSAMRAVEGLGL 476
Score = 43 (20.2 bits), Expect = 6.6e-07, Sum P(2) = 6.6e-07
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 103 AALSPEDLTDTEWYY 117
AA +P L D +WY+
Sbjct: 53 AAQAPAPLLDEDWYF 67
>TAIR|locus:2039445 [details] [associations]
symbol:AMS "AT2G16910" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009555 "pollen development" evidence=IMP] [GO:0048658 "tapetal
layer development" evidence=IMP] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0009555 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610
Pfam:PF14215 EMBL:AC005167 EMBL:AF488565 IPI:IPI00529182 PIR:G84545
RefSeq:NP_179283.2 UniGene:At.48482 UniGene:At.70395
ProteinModelPortal:Q9ZVX2 SMR:Q9ZVX2 STRING:Q9ZVX2 PRIDE:Q9ZVX2
EnsemblPlants:AT2G16910.1 GeneID:816194 KEGG:ath:AT2G16910
TAIR:At2g16910 eggNOG:NOG313389 HOGENOM:HOG000033929
InParanoid:Q9ZVX2 OMA:PRTKSCE PhylomeDB:Q9ZVX2
ProtClustDB:CLSN2690121 ArrayExpress:Q9ZVX2 Genevestigator:Q9ZVX2
GO:GO:0048658 Uniprot:Q9ZVX2
Length = 571
Score = 143 (55.4 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 29/62 (46%), Positives = 44/62 (70%)
Query: 441 HVKSERRQRGKLNERFVILKSMVPSVSKFDKVSILDDTIEYVQELERKVKELESCRAKLE 500
++ +ERR+R KLN+R L+S+VP ++K D+ SIL D I YV+EL+ + KEL+ +LE
Sbjct: 315 NLMAERRRRKKLNDRLYALRSLVPRITKLDRASILGDAINYVKELQNEAKELQD---ELE 371
Query: 501 AN 502
N
Sbjct: 372 EN 373
Score = 47 (21.6 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 9/34 (26%), Positives = 19/34 (55%)
Query: 14 ESLKKQLALAVRSIQWSYAIFWTISDTQPGVLEW 47
++L ++L V + W Y + W +++ Q V +W
Sbjct: 6 QNLLEKLRPLVGARAWDYCVLWRLNEDQRFV-KW 38
Score = 40 (19.1 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 6/31 (19%), Positives = 19/31 (61%)
Query: 539 INEKDVQIEIKCPWREGMLLEIMDAISNLHL 569
++ ++ +++ C ++ G +M+A+ +L L
Sbjct: 435 LDGREFFVKVICEYKPGGFTRLMEALDSLGL 465
>UNIPROTKB|Q69IU0 [details] [associations]
symbol:P0498F03.15 "Putative MYC-related DNA binding
protein RD22BP1" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP008215 EMBL:AP006525 EMBL:AP007254
RefSeq:NP_001063693.1 UniGene:Os.86289
EnsemblPlants:LOC_Os09g34330.1 GeneID:4347601 KEGG:osa:4347601
OMA:GPTVSHV ProtClustDB:CLSN2725166 Uniprot:Q69IU0
Length = 284
Score = 139 (54.0 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 29/66 (43%), Positives = 43/66 (65%)
Query: 440 NHVKSERRQRGKLNERFVILKSMVPSVSKFDKVSILDDTIEYVQELERKVKELES-CRAK 498
+HV++ER++R KLN RF L++ VP+VS+ DK S+L D Y+ EL +V LES R
Sbjct: 111 SHVEAERQRREKLNRRFCDLRAAVPTVSRMDKASLLADAAAYIAELRARVARLESDARQA 170
Query: 499 LEANYD 504
A ++
Sbjct: 171 AAARFE 176
>TAIR|locus:2163163 [details] [associations]
symbol:PIF7 "AT5G61270" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;IDA] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0003690 "double-stranded DNA binding" evidence=IDA] [GO:0009416
"response to light stimulus" evidence=IDA] [GO:0009704
"de-etiolation" evidence=IMP] [GO:0016607 "nuclear speck"
evidence=IDA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0016607
GO:GO:0003700 GO:GO:0006351 GO:GO:0003690 GO:GO:0009585
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AB010073 HSSP:P22415
GO:GO:0009704 EMBL:AF488604 EMBL:BX831447 EMBL:AY568656
EMBL:AJ630484 EMBL:AK220640 IPI:IPI00537261 IPI:IPI00656604
RefSeq:NP_001032117.1 RefSeq:NP_200935.2 UniGene:At.29114
ProteinModelPortal:Q570R7 SMR:Q570R7 IntAct:Q570R7 STRING:Q570R7
EnsemblPlants:AT5G61270.1 GeneID:836248 KEGG:ath:AT5G61270
TAIR:At5g61270 eggNOG:NOG286182 HOGENOM:HOG000097081
InParanoid:Q9FLK6 OMA:HNESERR PhylomeDB:Q570R7
ProtClustDB:CLSN2681114 Genevestigator:Q570R7 Uniprot:Q570R7
Length = 366
Score = 138 (53.6 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 29/62 (46%), Positives = 46/62 (74%)
Query: 438 ATNHVKSERRQRGKLNERFVILKSMVPSVSKFDKVSILDDTIEYVQELERKVKELESCRA 497
A H +SERR+R ++N+R L+ ++P+ SK DKVSILDD IE++++L+ +V+ + S RA
Sbjct: 168 AAIHNESERRRRDRINQRMRTLQKLLPTASKADKVSILDDVIEHLKQLQAQVQFM-SLRA 226
Query: 498 KL 499
L
Sbjct: 227 NL 228
Score = 45 (20.9 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 18/69 (26%), Positives = 27/69 (39%)
Query: 234 TMVPVVGYEVLEMASPDNNGS-SGIKHNQPADDSFMVEGINGVASQVQSWQFMDDEFSNC 292
T+ VV L+ S S +G HN + D G ++ W + +E
Sbjct: 44 TLESVVHQAALQQPSKFQLQSPNGPNHNYESKDGSCSRK-RGYPQEMDRWFAVQEESHRV 102
Query: 293 VHSVNSSDS 301
HSV +S S
Sbjct: 103 GHSVTASAS 111
>UNIPROTKB|Q336V8 [details] [associations]
symbol:Os10g0544200 "Os10g0544200 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0003677 EMBL:DP000086 EMBL:AP008216
EMBL:CM000147 Gene3D:4.10.280.10 SUPFAM:SSF47459 eggNOG:NOG245311
EMBL:AK063669 RefSeq:NP_001065200.1 UniGene:Os.46563
EnsemblPlants:LOC_Os10g39750.1 GeneID:4349271 KEGG:osa:4349271
ProtClustDB:CLSN2693493 Uniprot:Q336V8
Length = 380
Score = 138 (53.6 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 26/55 (47%), Positives = 42/55 (76%)
Query: 439 TNHVKSERRQRGKLNERFVILKSMVPSVSKFDKVSILDDTIEYVQELERKVKELE 493
+ ++ +ERR+R +LN+R +L+S+VP +SK D+ SIL DTI YV+EL ++K L+
Sbjct: 195 SKNLMAERRRRKRLNDRLSMLRSVVPRISKMDRTSILGDTIGYVKELMDRIKNLQ 249
>UNIPROTKB|Q5SMX4 [details] [associations]
symbol:P0498B01.36 "cDNA clone:J033115I17, full insert
sequence" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP008207 EMBL:AP003417 EMBL:HQ858870
EMBL:AK102964 RefSeq:NP_001042293.1 UniGene:Os.32770 GeneID:4327325
KEGG:osa:4327325 eggNOG:NOG253236 OMA:GNNGFMC
ProtClustDB:CLSN2691168 Uniprot:Q5SMX4
Length = 439
Score = 139 (54.0 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 31/61 (50%), Positives = 42/61 (68%)
Query: 441 HVKSERRQRGKLNERFVILKSMVPSVSKFDKVSILDDTIEYVQELERKVKELESCRAKLE 500
H+ SER++R KLN+ F+ LK+++P SK DK SIL EYV+ LE K+ ELE +LE
Sbjct: 255 HMISERKRREKLNDSFLALKAVLPPGSKKDKTSILIRAREYVKSLESKLSELEEKNRELE 314
Query: 501 A 501
A
Sbjct: 315 A 315
>UNIPROTKB|Q5SMX2 [details] [associations]
symbol:P0498B01.25 "Basic helix-loop-helix protein-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP003417 ProteinModelPortal:Q5SMX2
EnsemblPlants:LOC_Os01g09930.1 Gramene:Q5SMX2 HOGENOM:HOG000237612
OMA:IRAREHI Uniprot:Q5SMX2
Length = 412
Score = 138 (53.6 bits), Expect = 4.5e-06, P = 4.5e-06
Identities = 30/61 (49%), Positives = 43/61 (70%)
Query: 441 HVKSERRQRGKLNERFVILKSMVPSVSKFDKVSILDDTIEYVQELERKVKELESCRAKLE 500
H+ SER++R KLN+ FV LK+++P+ SK DK SIL E+++ LE K+ ELE +LE
Sbjct: 185 HMISERKRREKLNDSFVALKAVLPTGSKKDKASILIRAREHIKSLESKLSELEEKNRELE 244
Query: 501 A 501
A
Sbjct: 245 A 245
>TAIR|locus:2155503 [details] [associations]
symbol:ALC "AT5G67110" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;ISS;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0010047 "fruit dehiscence" evidence=IMP]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0010047 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB020742 EMBL:BT028946 EMBL:AF488605 IPI:IPI00537617
IPI:IPI00846166 IPI:IPI00846501 RefSeq:NP_001078810.1
RefSeq:NP_001078811.1 RefSeq:NP_201512.1 UniGene:At.28825
HSSP:P36956 ProteinModelPortal:Q9FHA2 SMR:Q9FHA2 IntAct:Q9FHA2
STRING:Q9FHA2 EnsemblPlants:AT5G67110.1 GeneID:836846
KEGG:ath:AT5G67110 TAIR:At5g67110 eggNOG:NOG329583
HOGENOM:HOG000033902 InParanoid:Q9FHA2 OMA:HTRINET PhylomeDB:Q9FHA2
ProtClustDB:CLSN2686902 Genevestigator:Q9FHA2 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 Uniprot:Q9FHA2
Length = 210
Score = 130 (50.8 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 46/155 (29%), Positives = 76/155 (49%)
Query: 340 LDPQGHDLHYQSVLSSLL-KT-SHQLVSRPHFQNHSQESSFASWKKGGLVSCKKQRDGVS 397
L P S L +L +T + Q S P N S +F GG VS GVS
Sbjct: 10 LPPPSSSDELSSFLRQILSRTPTAQPSSPPKSTNVSSAETFFPSVSGGAVSSVGY--GVS 67
Query: 398 QKLLKKILFEVPRIINYRLLESSEDNHIKDDVSRLEAEETATNHVKSERRQRGKLNERFV 457
+ K FE ++ + + N +K ++ A H SE+++R K+NE+
Sbjct: 68 ETGQDKYAFE------HKRSGAKQRNSLKRNID-------AQFHNLSEKKRRSKINEKMK 114
Query: 458 ILKSMVPSVSKFDKVSILDDTIEYVQELERKVKEL 492
L+ ++P+ +K DK S+LD+ IEY+++L+ +V+ L
Sbjct: 115 ALQKLIPNSNKTDKASMLDEAIEYLKQLQLQVQTL 149
>UNIPROTKB|Q6YUS3 [details] [associations]
symbol:OSJNBb0088N06.15 "BHLH protein-like" species:39947
"Oryza sativa Japonica Group" [GO:0003677 "DNA binding"
evidence=IMP] [GO:0005634 "nucleus" evidence=IC] [GO:0048653
"anther development" evidence=IMP] [GO:0048654 "anther
morphogenesis" evidence=IMP] [GO:0048657 "tapetal cell
differentiation" evidence=IMP] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 eggNOG:NOG313389
HOGENOM:HOG000033929 OMA:PRTKSCE EMBL:AP008208 EMBL:CM000139
GO:GO:0048657 EMBL:AP004078 EMBL:AP005851 RefSeq:NP_001045710.1
UniGene:Os.50000 EnsemblPlants:LOC_Os02g02820.1 GeneID:4328113
KEGG:osa:4328113 ProtClustDB:CLSN2692391 Uniprot:Q6YUS3
Length = 552
Score = 133 (51.9 bits), Expect = 6.4e-06, Sum P(2) = 6.4e-06
Identities = 27/70 (38%), Positives = 48/70 (68%)
Query: 434 AEETATNHVKSERRQRGKLNERFVILKSMVPSVSKFDKVSILDDTIEYVQELERKVKELE 493
A+ ++++ER++R KLN L+S+VP+++K D+ SIL D I+Y+ L+++VKEL+
Sbjct: 279 AKRQQCKNLEAERKRRKKLNGHLYKLRSLVPNITKMDRASILGDAIDYIVGLQKQVKELQ 338
Query: 494 SCRAKLEANY 503
+LE N+
Sbjct: 339 D---ELEDNH 345
Score = 51 (23.0 bits), Expect = 6.4e-06, Sum P(2) = 6.4e-06
Identities = 21/84 (25%), Positives = 37/84 (44%)
Query: 15 SLKKQLALAVRSIQWSYAIFWTISDTQPGVLEWGDGYYNGDIKTRKTI-----QSVELSS 69
SL L V S W Y I+W +S Q LE + +++ + + S+ L S
Sbjct: 27 SLDAALRPLVGSDGWDYCIYWRLSPDQR-FLEMTGFCCSSELEAQVSALLDLPSSIPLDS 85
Query: 70 NQLGLQRSEQL--RELYESLSAGE 91
+ +G+ L + +++S S E
Sbjct: 86 SSIGMHAQALLSNQPIWQSSSEEE 109
Score = 49 (22.3 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 8/19 (42%), Positives = 14/19 (73%)
Query: 130 GLPGRALANNQPIWLCNAQ 148
G+ +AL +NQPIW +++
Sbjct: 89 GMHAQALLSNQPIWQSSSE 107
>UNIPROTKB|Q8S0C6 [details] [associations]
symbol:B1112D09.6 "Uncharacterized protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:CM000138
HSSP:P01106 EMBL:AP003432 EMBL:AK106333
EnsemblPlants:LOC_Os01g39330.1 eggNOG:NOG273636 OMA:LNDSFHT
Uniprot:Q8S0C6
Length = 454
Score = 137 (53.3 bits), Expect = 7.0e-06, P = 7.0e-06
Identities = 37/136 (27%), Positives = 68/136 (50%)
Query: 434 AEETATN-----HVKSERRQRGKLNERFVILKSMVPSVSKFDKVSILDDTIEYVQELERK 488
A +ATN H+ SER++R KLN+ F L+S++P SK DK ++L + +Y++ LE +
Sbjct: 255 AAASATNSSQLYHMMSERKRREKLNDSFHTLRSLLPPCSKKDKTTVLINAAKYLKSLETE 314
Query: 489 VKELESCRAKLEANYDNXXXXXXXXXXXXDIYESEPEFERFATADNINVSINEKDVQIEI 548
+ ELE KLE + + + + AD+ + + V + +
Sbjct: 315 ITELEGTNTKLEKHIAGGGGAADAAMRARRA-QQRAKVQISKAADSQSQQLVSLTVMVMV 373
Query: 549 KCPWREGMLLEIMDAI 564
+C E ++L I++ +
Sbjct: 374 ECDVVE-LVLHILECL 388
>TAIR|locus:2141206 [details] [associations]
symbol:DYT1 "AT4G21330" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IMP;TAS]
[GO:0048658 "tapetal layer development" evidence=IMP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL161554
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0048658 EMBL:EF637083 EMBL:AL031187
IPI:IPI00519007 PIR:T05175 RefSeq:NP_193864.1 UniGene:At.54456
ProteinModelPortal:O81900 SMR:O81900 EnsemblPlants:AT4G21330.1
GeneID:827883 KEGG:ath:AT4G21330 TAIR:At4g21330 eggNOG:NOG316303
HOGENOM:HOG000112300 InParanoid:O81900 OMA:MEEAPPE PhylomeDB:O81900
ProtClustDB:CLSN2685365 Genevestigator:O81900 Uniprot:O81900
Length = 207
Score = 128 (50.1 bits), Expect = 7.9e-06, P = 7.9e-06
Identities = 35/135 (25%), Positives = 67/135 (49%)
Query: 433 EAEETATNHVKSERRQRGKLNERFVILKSMVPSVSKFDKVSILDDTIEYVQELERKVKEL 492
E E + ++++ERR+R KL+ R + L+S VP V+ K SI++D I Y+ EL+ VK L
Sbjct: 25 EDENFKSPNLEAERRRREKLHCRLMALRSHVPIVTNMTKASIVEDAITYIGELQNNVKNL 84
Query: 493 ESCRAKLEANYDNXXXXXXXXXXXXDIYESE--PEFERFATADNINV-SINEKDVQIEIK 549
++E ++ S+ E ++ +N+ + I E+ ++I
Sbjct: 85 LETFHEMEEAPPEIDEEQTDPMIKPEVETSDLNEEMKKLGIEENVQLCKIGERKFWLKII 144
Query: 550 CPWREGMLLEIMDAI 564
R+G+ + M+ +
Sbjct: 145 TEKRDGIFTKFMEVM 159
>UNIPROTKB|Q948F6 [details] [associations]
symbol:OSJNBa0049O12.18 "Putative SPATULA" species:4530
"Oryza sativa" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956
PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:AC069158
ProteinModelPortal:Q948F6 Gramene:Q948F6 Genevestigator:Q948F6
Uniprot:Q948F6
Length = 298
Score = 131 (51.2 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 26/62 (41%), Positives = 43/62 (69%)
Query: 431 RLEAEETATNHVKSERRQRGKLNERFVILKSMVPSVSKFDKVSILDDTIEYVQELERKVK 490
R + A H SE+R+R ++NE+ L+S++P+ SK DK S+LDD IEY+++L+ +V+
Sbjct: 27 RGKRSRAAEVHNLSEKRRRSRINEKMKALQSLIPNSSKTDKASMLDDAIEYLKQLQLQVQ 86
Query: 491 EL 492
L
Sbjct: 87 ML 88
>UNIPROTKB|Q84LF9 [details] [associations]
symbol:RERJ1 "Transcription Factor" species:4530 "Oryza
sativa" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P01106 EMBL:AB040744
ProteinModelPortal:Q84LF9 Gramene:Q84LF9 Genevestigator:Q84LF9
Uniprot:Q84LF9
Length = 310
Score = 130 (50.8 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 26/64 (40%), Positives = 43/64 (67%)
Query: 438 ATNHVKSERRQRGKLNERFVILKSMVPSVSKFDKVSILDDTIEYVQELERKVKELESCRA 497
A ++ ER +R KLNE+ L+S+VP+++K DK SI+ D IEY+Q L+ + +++ A
Sbjct: 91 ANKNILMERDRRRKLNEKLYALRSVVPNITKMDKASIIKDAIEYIQRLQAEEQQMLREVA 150
Query: 498 KLEA 501
LE+
Sbjct: 151 ALES 154
Score = 42 (19.8 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 10/28 (35%), Positives = 15/28 (53%)
Query: 228 SQNLDTTMVPVVGYEVLEMASPDNNGSS 255
S+ LD+ +P E +SPD + SS
Sbjct: 23 SEELDSMYLPTQDDSNYESSSPDGSHSS 50
>TAIR|locus:2126876 [details] [associations]
symbol:UNE10 "AT4G00050" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009567
"double fertilization forming a zygote and endosperm" evidence=IMP]
[GO:0009506 "plasmodesma" evidence=IDA] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0009506 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:AL161471 HSSP:P22415 GO:GO:0009567
EMBL:AF069299 EMBL:AF488561 EMBL:AK117229 EMBL:BT025971
IPI:IPI00517893 PIR:T01333 RefSeq:NP_191916.3 UniGene:At.44779
ProteinModelPortal:Q8GZ38 SMR:Q8GZ38 IntAct:Q8GZ38
EnsemblPlants:AT4G00050.1 GeneID:828175 KEGG:ath:AT4G00050
TAIR:At4g00050 eggNOG:NOG239145 HOGENOM:HOG000084918
InParanoid:Q8GZ38 OMA:MMSRMNM PhylomeDB:Q8GZ38
ProtClustDB:CLSN2690671 Genevestigator:Q8GZ38 Uniprot:Q8GZ38
Length = 399
Score = 131 (51.2 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 29/75 (38%), Positives = 47/75 (62%)
Query: 417 LESSEDNHI--KDDVSRLEAEETATNHVKSERRQRGKLNERFVILKSMVPSVSKFDKVSI 474
+E E+ K VS + A H +SER++R K+N+R L+ +VP+ SK DK S+
Sbjct: 193 MEDEEEKKAGGKSSVSTKRSRAAAI-HNQSERKRRDKINQRMKTLQKLVPNSSKTDKASM 251
Query: 475 LDDTIEYVQELERKV 489
LD+ IEY+++L+ +V
Sbjct: 252 LDEVIEYLKQLQAQV 266
Score = 43 (20.2 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 12/44 (27%), Positives = 19/44 (43%)
Query: 214 NMRDDKDLACAALCSQNLDTTMVPVVGYEVLEMASPDNNGSSGI 257
N D A A ++ +P++ YEV E+ NG G+
Sbjct: 7 NCHIDDTPAAATTTVRSTTAADIPILDYEVAELTW--ENGQLGL 48
>TAIR|locus:504956068 [details] [associations]
symbol:AT2G31215 "AT2G31215" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002685 GO:GO:0003700 Gene3D:4.10.280.10 SUPFAM:SSF47459
IPI:IPI00519006 RefSeq:NP_850161.1 UniGene:At.52991
ProteinModelPortal:F4IQQ9 SMR:F4IQQ9 EnsemblPlants:AT2G31215.1
GeneID:817678 KEGG:ath:AT2G31215 PhylomeDB:F4IQQ9 Uniprot:F4IQQ9
Length = 129
Score = 109 (43.4 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 24/64 (37%), Positives = 40/64 (62%)
Query: 444 SERRQRGKLNERFVILKSMVPSVSKFDKVSILDDTIEYVQELERKVKELESC--RAKLEA 501
+ER +R N+RF LK+++P+ +K + SI+ D I Y+ EL+R V EL+ + K A
Sbjct: 27 TERERRALFNDRFFDLKNLIPNPTKGGEASIVQDGIVYINELQRLVSELKYLVEKKKCGA 86
Query: 502 NYDN 505
++N
Sbjct: 87 RHNN 90
>TAIR|locus:2020003 [details] [associations]
symbol:AT1G10610 "AT1G10610" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC009398 Gene3D:4.10.280.10
SUPFAM:SSF47459 InterPro:IPR025610 Pfam:PF14215 EMBL:AC007067
HOGENOM:HOG000033929 EMBL:AK229375 EMBL:AF488620 IPI:IPI00786098
PIR:F86239 RefSeq:NP_172531.2 UniGene:At.42172
ProteinModelPortal:Q0WNR2 SMR:Q0WNR2 EnsemblPlants:AT1G10610.1
GeneID:837604 KEGG:ath:AT1G10610 TAIR:At1g10610 eggNOG:NOG318339
OMA:GIHGEVV PhylomeDB:Q0WNR2 ProtClustDB:CLSN2920225
Genevestigator:Q0WNR2 Uniprot:Q0WNR2
Length = 441
Score = 121 (47.7 bits), Expect = 3.6e-05, Sum P(3) = 3.6e-05
Identities = 35/139 (25%), Positives = 66/139 (47%)
Query: 423 NHIKDDVSRLEAEETATNHVKSERRQRGKLNERFVILKSMVPSVSKFDKVSILDDTIEYV 482
N K + L E + ++ SER++R ++N+ L+++VP ++K +K+ I D ++Y+
Sbjct: 247 NDSKANKKLLPTENFKSKNLHSERKRRERINQAMYGLRAVVPKITKLNKIGIFSDAVDYI 306
Query: 483 QELERKVKELESCRAKLEANYDNXXXXXXXXXXXXDIYESEPEFERFATADNINVSINEK 542
EL + ++LE E N ++PE ER ++ N V NE
Sbjct: 307 NELLVEKQKLED-----ELKGINEMECKEIAAEEQSAI-ADPEAERVSSKSNKRVKKNE- 359
Query: 543 DVQIEIKCPWREGMLLEIM 561
V+IE+ L+ ++
Sbjct: 360 -VKIEVHETGERDFLIRVV 377
Score = 51 (23.0 bits), Expect = 3.6e-05, Sum P(3) = 3.6e-05
Identities = 10/34 (29%), Positives = 15/34 (44%)
Query: 14 ESLKKQLALAVRSIQWSYAIFWTISDTQPGVLEW 47
E +K+ L V S W + W + D +EW
Sbjct: 8 ERVKEFLRPFVDSRTWDLCVIWKLGDDPSRFIEW 41
Score = 41 (19.5 bits), Expect = 3.6e-05, Sum P(3) = 3.6e-05
Identities = 9/31 (29%), Positives = 17/31 (54%)
Query: 130 GLPGRALANNQPIWLCNAQYADSKVFSRSLL 160
G+ G + + P WL N+ + ++FS +L
Sbjct: 103 GIHGEVVMSKSPKWLVNSG-SKMEMFSTRVL 132
Score = 40 (19.1 bits), Expect = 4.6e-05, Sum P(3) = 4.6e-05
Identities = 14/39 (35%), Positives = 19/39 (48%)
Query: 219 KDLACAALCSQNLDTTMVPVVGYEVLEMASPD---NNGS 254
+ LAC AL L + P + EV+ SP N+GS
Sbjct: 84 RTLACEALSRFPLFMPLYPGIHGEVVMSKSPKWLVNSGS 122
>TAIR|locus:2042556 [details] [associations]
symbol:AT2G31210 "AT2G31210" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC006593 Gene3D:4.10.280.10
SUPFAM:SSF47459 eggNOG:NOG254981 HOGENOM:HOG000083787
ProtClustDB:CLSN2716481 EMBL:AJ519809 EMBL:AK118441 EMBL:BT009675
IPI:IPI00540344 PIR:H84717 RefSeq:NP_180679.2 UniGene:At.38250
ProteinModelPortal:Q8GX46 SMR:Q8GX46 EnsemblPlants:AT2G31210.1
GeneID:817677 KEGG:ath:AT2G31210 TAIR:At2g31210 InParanoid:Q8GX46
OMA:ERERRCH PhylomeDB:Q8GX46 Genevestigator:Q8GX46 Uniprot:Q8GX46
Length = 428
Score = 130 (50.8 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 26/50 (52%), Positives = 36/50 (72%)
Query: 444 SERRQRGKLNERFVILKSMVPSVSKFDKVSILDDTIEYVQELERKVKELE 493
+ER +R LNER+ LK ++PS SK D+ SIL D I+Y+ EL R+V EL+
Sbjct: 218 TERERRCHLNERYEALKLLIPSPSKGDRASILQDGIDYINELRRRVSELK 267
>TAIR|locus:2117788 [details] [associations]
symbol:AT4G28800 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AL161573
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL035353 IPI:IPI00517558
IPI:IPI01020410 PIR:T04519 RefSeq:NP_194609.5 UniGene:At.71648
ProteinModelPortal:Q9SVU7 SMR:Q9SVU7 GeneID:829001
KEGG:ath:AT4G28800 TAIR:At4g28800 InParanoid:Q9SVU7
Genevestigator:Q9SVU7 Uniprot:Q9SVU7
Length = 445
Score = 130 (50.8 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 30/82 (36%), Positives = 49/82 (59%)
Query: 417 LESSEDNH----IKDDVSRLEAEETATNHVKSERRQRGKLNERFVILKSMVPSVSKFDKV 472
L++ E+ H + SR + TA H +ERR+R K+NE+ L+ ++P +K KV
Sbjct: 233 LKAREETHGTEEARGSTSR-KRSRTAEMHNLAERRRREKINEKMKTLQQLIPRCNKSTKV 291
Query: 473 SILDDTIEYVQELERKVKELES 494
S LDD IEYV+ L+ +++ + S
Sbjct: 292 STLDDAIEYVKSLQSQIQGMMS 313
>TAIR|locus:2009537 [details] [associations]
symbol:AT1G22490 "AT1G22490" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009536
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC006551
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238962
EMBL:AY088234 EMBL:AF488622 IPI:IPI00545534 PIR:B86358
RefSeq:NP_564171.1 UniGene:At.19247 ProteinModelPortal:Q9SK91
SMR:Q9SK91 EnsemblPlants:AT1G22490.1 GeneID:838855
KEGG:ath:AT1G22490 TAIR:At1g22490 eggNOG:NOG281753
InParanoid:Q8L9T3 OMA:ESHANIK PhylomeDB:Q9SK91
ProtClustDB:CLSN2679534 Genevestigator:Q9SK91 Uniprot:Q9SK91
Length = 304
Score = 126 (49.4 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 36/148 (24%), Positives = 69/148 (46%)
Query: 433 EAEETATNHVKSERRQRGKLNERFVILKSMVPS--VSKFDKVSILDDTIEYVQELERKVK 490
E E H+ ER +R ++NE +L+S++PS + D+ SI+ I YV+ELE ++
Sbjct: 109 EIENQRMTHIAVERNRRKQMNEYLAVLRSLMPSSYAQRGDQASIVGGAINYVKELEHILQ 168
Query: 491 ELESCRAKLEANYDNXXXXXXXXXXXXDIYESEPEFERFATAD---------NINVSINE 541
+E R + + D + S P++ +++D I V++ E
Sbjct: 169 SMEPKRTRTHDPKGDKTSTSSLVGPFTDFF-SFPQYSTKSSSDVPESSSSPAEIEVTVAE 227
Query: 542 KDVQIEIKCPWREGMLLEIMDAISNLHL 569
I+I + LL+++ ++ +L L
Sbjct: 228 SHANIKIMTKKKPRQLLKLITSLQSLRL 255
>UNIPROTKB|Q5VRS4 [details] [associations]
symbol:OSJNBa0015I14.14 "Basic helix-loop-helix protein
SPATULA-like" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0006355 EMBL:CM000143
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:AP002536 KEGG:dosa:Os06t0164400-01
Uniprot:Q5VRS4
Length = 315
Score = 126 (49.4 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 23/52 (44%), Positives = 40/52 (76%)
Query: 441 HVKSERRQRGKLNERFVILKSMVPSVSKFDKVSILDDTIEYVQELERKVKEL 492
H SE+R+R K+NE+ L+S++P+ +K DK S+LD+ IEY+++L+ +V+ L
Sbjct: 108 HNLSEKRRRSKINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQML 159
>UNIPROTKB|Q84LH4 [details] [associations]
symbol:OSJNBb0011H13.2 "Putative Helix-loop-helix
DNA-binding domain containing protein" species:39947 "Oryza sativa
Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0003677 EMBL:DP000009 EMBL:AP008209
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:CM000140 EMBL:AC120983
EMBL:AC135956 RefSeq:NP_001051150.1 UniGene:Os.24540
EnsemblPlants:LOC_Os03g51910.1 GeneID:4333984 KEGG:osa:4333984
eggNOG:NOG262475 OMA:SKQMMLS ProtClustDB:CLSN2694257 Uniprot:Q84LH4
Length = 327
Score = 126 (49.4 bits), Expect = 6.2e-05, P = 6.2e-05
Identities = 34/92 (36%), Positives = 55/92 (59%)
Query: 418 ESSEDNHIKDDVSRLEAEE-TATN-HVKSERRQRGKLNERFVILKSMVPSVSKFD-KVSI 474
+SS+ + K+D + A+ ATN H +ER +R K++ER +L+ +VP SK K +
Sbjct: 133 DSSDGDGTKEDYVHVRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCSKITGKAVM 192
Query: 475 LDDTIEYVQELERKVKELESCRAKL--EANYD 504
LD+ I YVQ L+R+V+ L A + E ++D
Sbjct: 193 LDEIINYVQSLQRQVEFLSMKLATVNPELSFD 224
>UNIPROTKB|Q7XKP5 [details] [associations]
symbol:OSJNBb0013O03.11 "OSJNBb0013O03.11 protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP008210 HOGENOM:HOG000006429 EMBL:AL731621
RefSeq:NP_001173851.1 UniGene:Os.98890
EnsemblPlants:LOC_Os04g23440.1 GeneID:9269507 KEGG:osa:9269507
OMA:NIAMERD Genevestigator:Q7XKP5 Uniprot:Q7XKP5
Length = 293
Score = 111 (44.1 bits), Expect = 8.0e-05, Sum P(2) = 8.0e-05
Identities = 19/59 (32%), Positives = 40/59 (67%)
Query: 434 AEETATNHVKSERRQRGKLNERFVILKSMVPSVSKFDKVSILDDTIEYVQELERKVKEL 492
A ++ ++ ER +R +LNE+ L+++VP ++K DK SI+ D I ++++L+ + ++L
Sbjct: 91 AAAASSKNIAMERDRRKRLNEKLFALRAVVPKITKMDKASIVRDAIAHIEKLQEEERQL 149
Score = 55 (24.4 bits), Expect = 8.0e-05, Sum P(2) = 8.0e-05
Identities = 11/36 (30%), Positives = 21/36 (58%)
Query: 535 INVS-INEKDVQIEIKCPWREGMLLEIMDAISNLHL 569
+ VS + EK V + I+C G + ++ A+ +L+L
Sbjct: 234 LQVSKVGEKTVAVSIRCAKTRGAMAKVCHAVESLYL 269
>UNIPROTKB|Q84T08 [details] [associations]
symbol:OSJNBa0087C10.10 "BHLH transcription factor,
putative, expressed" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:DP000009
EMBL:AP008209 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238007 EMBL:AC108906 RefSeq:NP_001051605.1
UniGene:Os.33544 STRING:Q84T08 EnsemblPlants:LOC_Os03g58830.1
GeneID:4334471 KEGG:osa:4334471 OMA:GTSTSEW ProtClustDB:CLSN2694415
Uniprot:Q84T08
Length = 265
Score = 123 (48.4 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 32/102 (31%), Positives = 52/102 (50%)
Query: 426 KDDVSRLEAEE-TATN-HVKSERRQRGKLNERFVILKSMVPSVSK-FDKVSILDDTIEYV 482
K D + A AT+ H +ER +R K++ER IL+ +VP +K K S+LD+ I Y+
Sbjct: 130 KQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYI 189
Query: 483 QELERKVKELESCRAKLEANYDNXXXXXXXXXXXXDIYESEP 524
Q L+R+V+ L + A+ +N +Y + P
Sbjct: 190 QALQRQVEFLSMKLEAVNAHVNNGIEAFPPKDFGAQVYNTAP 231
>TAIR|locus:4010713915 [details] [associations]
symbol:AT4G28811 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
EMBL:AL161573 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL035353
HOGENOM:HOG000240264 EMBL:AJ519811 IPI:IPI00518617 PIR:H85335
PIR:T04518 RefSeq:NP_001078462.1 UniGene:At.46149
ProteinModelPortal:Q8GT73 SMR:Q8GT73 PRIDE:Q8GT73
EnsemblPlants:AT4G28811.1 GeneID:5008170 KEGG:ath:AT4G28811
TAIR:At4g28811 eggNOG:NOG314238 PhylomeDB:Q8GT73
ProtClustDB:CLSN2699107 Genevestigator:Q8GT73 Uniprot:Q8GT73
Length = 544
Score = 128 (50.1 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 33/106 (31%), Positives = 57/106 (53%)
Query: 385 GLVSCKKQRDGVSQKLLKKILFEVPRIINYRLLESSEDNHIKDDVSRLEAEETATNHVKS 444
G+ + +R + + KI + R ++ +E+ H SR + A H S
Sbjct: 309 GVNKAETERVQIQPERETKITEDKKREETIAEIQGTEEAH--GSTSR-KRSRAADMHNLS 365
Query: 445 ERRQRGKLNERFVILKSMVPSVSKFDKVSILDDTIEYVQELERKVK 490
ERR+R ++NER L+ ++P K DKVS+L+D IEYV+ L+ +++
Sbjct: 366 ERRRRERINERMKTLQELLPRCRKTDKVSMLEDVIEYVKSLQLQIQ 411
>TAIR|locus:4010713916 [details] [associations]
symbol:AT4G28815 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
EMBL:AL161573 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL035353
PIR:H85335 PIR:T04518 EMBL:AJ577586 IPI:IPI00530422
RefSeq:NP_001078463.1 UniGene:At.71260 ProteinModelPortal:Q7XHI7
SMR:Q7XHI7 EnsemblPlants:AT4G28815.1 GeneID:5008171
KEGG:ath:AT4G28815 TAIR:At4g28815 eggNOG:NOG83291 PhylomeDB:Q7XHI7
Genevestigator:Q7XHI7 Uniprot:Q7XHI7
Length = 307
Score = 124 (48.7 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 26/66 (39%), Positives = 41/66 (62%)
Query: 426 KDDVSRLEAEETATNHVKSERRQRGKLNERFVILKSMVPSVSKFDKVSILDDTIEYVQEL 485
+ SR + A H +ERR+R K+NER L+ ++P +K KVS+L+D IEYV+ L
Sbjct: 141 RGSTSR-KRSRAAEMHNLAERRRREKINERMKTLQQLIPRCNKSTKVSMLEDVIEYVKSL 199
Query: 486 ERKVKE 491
E ++ +
Sbjct: 200 EMQINQ 205
>UNIPROTKB|Q58GE3 [details] [associations]
symbol:UDT1 "Undeveloped tapetum 1" species:39947 "Oryza
sativa Japonica Group" [GO:0005634 "nucleus" evidence=IDA]
[GO:0048656 "tapetal layer formation" evidence=IMP] [GO:0048658
"tapetal layer development" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0048656 EMBL:AY953870
STRING:Q58GE3 KEGG:dosa:Os07t0549600-01 Gramene:Q58GE3
HOGENOM:HOG000084429 Uniprot:Q58GE3
Length = 234
Score = 121 (47.7 bits), Expect = 9.4e-05, P = 9.4e-05
Identities = 22/76 (28%), Positives = 46/76 (60%)
Query: 418 ESSEDNHIKDDVSRLEAEETATNHVKSERRQRGKLNERFVILKSMVPSVSKFDKVSILDD 477
+ E+ + + +E + ++++ERR+RG+LN L+++VP ++K K + L D
Sbjct: 43 DGEEEQQQQQAAAAAMGKEFKSKNLEAERRRRGRLNGNIFALRAVVPKITKMSKEATLSD 102
Query: 478 TIEYVQELERKVKELE 493
IE+++ L+ +V EL+
Sbjct: 103 AIEHIKNLQNEVLELQ 118
>TAIR|locus:2079512 [details] [associations]
symbol:AT3G61950 "AT3G61950" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AL138642 HOGENOM:HOG000238962 EMBL:AF488600 EMBL:AK118527
EMBL:BT005298 EMBL:AJ630481 EMBL:AY568653 EMBL:AY088741
IPI:IPI00525313 IPI:IPI00529988 PIR:T47987 RefSeq:NP_567121.1
RefSeq:NP_850735.1 UniGene:At.22308 ProteinModelPortal:Q700E4
SMR:Q700E4 IntAct:Q700E4 EnsemblPlants:AT3G61950.1 GeneID:825368
KEGG:ath:AT3G61950 TAIR:At3g61950 eggNOG:NOG324736
InParanoid:Q700E4 OMA:RINHIAV PhylomeDB:Q700E4
ProtClustDB:CLSN2683564 Genevestigator:Q700E4 Uniprot:Q700E4
Length = 358
Score = 125 (49.1 bits), Expect = 9.5e-05, P = 9.5e-05
Identities = 62/253 (24%), Positives = 112/253 (44%)
Query: 326 LQEVEECNPTELT---SL-DPQGHDLHYQSVLSSLLKTSHQLVSRPHFQNHSQESSFASW 381
LQ ++E P EL SL D Q H QS + ++ ++Q VS SQE F S
Sbjct: 75 LQTLKE--PWELERYLSLEDSQFHS-PVQSETNRFMEGANQAVS-------SQEIPF-SQ 123
Query: 382 KKGGLVSCKKQRDGVSQKLLKKILFEVPRIINYRLLESSEDNHIKDDVSRLEAEETATNH 441
L S + +KI +P+ + E + K + E E NH
Sbjct: 124 ANMTLPSSTSSPLSAHSRRKRKINHLLPQEMTR---EKRKRRKTKPSKNNEEIENQRINH 180
Query: 442 VKSERRQRGKLNERFVILKSMVPS--VSKFDKVSILDDTIEYVQELERKVKELESC-RAK 498
+ ER +R ++NE L++++P + + D+ SI+ I YV+ LE+ ++ LES R +
Sbjct: 181 IAVERNRRRQMNEHINSLRALLPPSYIQRGDQASIVGGAINYVKVLEQIIQSLESQKRTQ 240
Query: 499 LEANYD--NXXXXXXXXXXXXDIYESEPEFERFATADNINVSINEKDVQIEIKCPWREGM 556
++N + D++ + E I ++ + V ++++C ++G
Sbjct: 241 QQSNSEVVENALNHLSGISSNDLWTT---LEDQTCIPKIEATVIQNHVSLKVQCEKKQGQ 297
Query: 557 LLEIMDAISNLHL 569
LL+ + ++ L L
Sbjct: 298 LLKGIISLEKLKL 310
>UNIPROTKB|Q7FA23 [details] [associations]
symbol:OSJNBa0058K23.6 "Os04g0618600 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956
PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:AP008210
EMBL:CM000141 EMBL:AL662970 RefSeq:NP_001053893.1 UniGene:Os.4548
EnsemblPlants:LOC_Os04g52770.1 GeneID:4337015 KEGG:osa:4337015
eggNOG:NOG275283 OMA:RSAEFHN ProtClustDB:CLSN2695118 Uniprot:Q7FA23
Length = 181
Score = 116 (45.9 bits), Expect = 0.00011, P = 0.00011
Identities = 22/56 (39%), Positives = 41/56 (73%)
Query: 437 TATNHVKSERRQRGKLNERFVILKSMVPSVSKFDKVSILDDTIEYVQELERKVKEL 492
+A H SERR+R ++NE+ L+ ++P+ +K DKVS+LD+ I+Y++ L+ +++ L
Sbjct: 14 SAEFHNFSERRRRDRINEKLKALQELLPNCTKTDKVSMLDEAIDYLKSLQLQLQML 69
>TAIR|locus:2205455 [details] [associations]
symbol:BIM2 "AT1G69010" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AC011665 EMBL:BT002352 EMBL:AY080650 EMBL:AY086798
EMBL:AF488627 IPI:IPI00519398 PIR:E96714 RefSeq:NP_177064.1
UniGene:At.35458 ProteinModelPortal:Q9CAA4 SMR:Q9CAA4 PaxDb:Q9CAA4
PRIDE:Q9CAA4 EnsemblPlants:AT1G69010.1 GeneID:843233
KEGG:ath:AT1G69010 TAIR:At1g69010 eggNOG:NOG246683
HOGENOM:HOG000070523 InParanoid:Q9CAA4 OMA:YVQYLQE PhylomeDB:Q9CAA4
ProtClustDB:CLSN2682349 Genevestigator:Q9CAA4 GermOnline:AT1G69010
Uniprot:Q9CAA4
Length = 311
Score = 123 (48.4 bits), Expect = 0.00012, P = 0.00012
Identities = 27/69 (39%), Positives = 42/69 (60%)
Query: 426 KDDVSRLEAEETATNHVKSERRQRGKLNERFVILKSMVP-SVSKFDKVSILDDTIEYVQE 484
+D +A + H +E+R+R K+NERF IL+ ++P S K D S L + I+YVQ
Sbjct: 35 RDSKENDKASAIRSKHSVTEQRRRSKINERFQILRELIPNSEQKRDTASFLLEVIDYVQY 94
Query: 485 LERKVKELE 493
L+ KV++ E
Sbjct: 95 LQEKVQKYE 103
>UNIPROTKB|Q6ZGS3 [details] [associations]
symbol:OJ1148_D05.9 "Putative basic-helix-loop-helix
transcription factor" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:CM000139 eggNOG:NOG262411 EMBL:AP004118
EnsemblPlants:LOC_Os02g46560.1 OMA:KRELATY Uniprot:Q6ZGS3
Length = 373
Score = 122 (48.0 bits), Expect = 0.00022, P = 0.00022
Identities = 27/72 (37%), Positives = 45/72 (62%)
Query: 430 SRLEAEETATNHVKSERRQRGKLNERFVILKSMVPS--VSKFDKVSILDDTIEYVQELER 487
SR E E H+ ER +R ++NE IL+S++P V + D+ SI+ IE+V+ELE+
Sbjct: 81 SREETETQRMTHIAVERNRRRQMNEYLAILRSLMPEPYVQRGDQASIVGGAIEFVKELEQ 140
Query: 488 KVKELESCRAKL 499
+++ LE+ + L
Sbjct: 141 QLQSLEAQKRTL 152
>TAIR|locus:2085964 [details] [associations]
symbol:BHLH32 "AT3G25710" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009718
"anthocyanin-containing compound biosynthetic process"
evidence=IMP] [GO:0016036 "cellular response to phosphate
starvation" evidence=IMP] [GO:0080147 "root hair cell development"
evidence=IMP] [GO:0048364 "root development" evidence=IEP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AB028607
GO:GO:0003677 GO:GO:0009718 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0016036
HOGENOM:HOG000243133 ProtClustDB:CLSN2689090 EMBL:DQ205679
EMBL:AY058840 EMBL:AY079033 EMBL:AY086383 EMBL:AF488571
IPI:IPI00523379 RefSeq:NP_189199.1 UniGene:At.22148
ProteinModelPortal:Q9LS08 SMR:Q9LS08 IntAct:Q9LS08 STRING:Q9LS08
PRIDE:Q9LS08 EnsemblPlants:AT3G25710.1 GeneID:822159
KEGG:ath:AT3G25710 TAIR:At3g25710 eggNOG:NOG304577 OMA:RERINTH
PhylomeDB:Q9LS08 Genevestigator:Q9LS08 GO:GO:0080147 Uniprot:Q9LS08
Length = 344
Score = 121 (47.7 bits), Expect = 0.00024, P = 0.00024
Identities = 38/131 (29%), Positives = 67/131 (51%)
Query: 368 HFQNHSQESSFASWK-KGGLVSCKKQRDGVSQKLLKKILFEVPRIINYRLLESSEDNHIK 426
H+ N SS +S+ G VS D L +IL E I R D I
Sbjct: 59 HYFNRRASSSSSSFDYNDGFVSPPPSMDHPQNHL--RILSEALGPIMRRGSSFGFDGEIM 116
Query: 427 DDVSR---LEAEETATN--HVKSERRQRGKLNERFVILKSMVPSVSKFDKVSILDDTIEY 481
+S ++A+ A + H ++ERR+R ++N L+S++P+ +K DK S+L + I++
Sbjct: 117 GKLSAQEVMDAKALAASKSHSEAERRRRERINTHLAKLRSILPNTTKTDKASLLAEVIQH 176
Query: 482 VQELERKVKEL 492
++EL+R+ ++
Sbjct: 177 MKELKRQTSQI 187
>UNIPROTKB|Q5NAE0 [details] [associations]
symbol:P0498A12.33 "Putative BP-5 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP003020
ProteinModelPortal:Q5NAE0 Gramene:Q5NAE0 Uniprot:Q5NAE0
Length = 565
Score = 124 (48.7 bits), Expect = 0.00026, P = 0.00026
Identities = 24/65 (36%), Positives = 41/65 (63%)
Query: 426 KDDVSRLEAEETATNHVKSERRQRGKLNERFVILKSMVPSVSKFDKVSILDDTIEYVQEL 485
K + TA H SERR+R ++NE+ L+ ++P+ +K DK S+LD+ IEY++ L
Sbjct: 302 KSGTRSTKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKIDKASMLDEAIEYLKTL 361
Query: 486 ERKVK 490
+ +V+
Sbjct: 362 QLQVQ 366
>TAIR|locus:2042486 [details] [associations]
symbol:AT2G31220 "AT2G31220" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC006593 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:BT005711 EMBL:BT008608 EMBL:AK228592
EMBL:AF251695 IPI:IPI00521500 PIR:A84718 RefSeq:NP_180680.2
UniGene:At.28314 ProteinModelPortal:Q84TK1 SMR:Q84TK1
EnsemblPlants:AT2G31220.1 GeneID:817679 KEGG:ath:AT2G31220
TAIR:At2g31220 eggNOG:NOG254981 HOGENOM:HOG000083787
InParanoid:Q84TK1 OMA:NTKICEG PhylomeDB:Q84TK1
ProtClustDB:CLSN2716481 Genevestigator:Q84TK1 Uniprot:Q84TK1
Length = 458
Score = 121 (47.7 bits), Expect = 0.00040, P = 0.00040
Identities = 28/120 (23%), Positives = 58/120 (48%)
Query: 444 SERRQRGKLNERFVILKSMVPSVSKFDKVSILDDTIEYVQELERKVKELESCRAKLEAN- 502
+ER +R N+RF LK+++P+ +K D+ SI+ + I+Y++EL R ++E + K
Sbjct: 251 TERERRVHFNDRFFDLKNLIPNPTKIDRASIVGEAIDYIKELLRTIEEFKMLVEKKRCGR 310
Query: 503 YDNXXXXXXXXXXXXDIYESEPEFERFATADNINVSINEKDVQIEIKCPW--REGMLLEI 560
+ + + E E + + ++ S K+ ++C W R+ + E+
Sbjct: 311 FRSKKRARVGEGGGGEDQEEEEDTVNYKPQSEVDQSCFNKNNNNSLRCSWLKRKSKVTEV 370
>UNIPROTKB|Q8GRJ1 [details] [associations]
symbol:OJ1343_B12.103 "Transcription factor BHLH9-like
protein" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 HSSP:P61244 EMBL:AP003824 EMBL:AP004010
Uniprot:Q8GRJ1
Length = 417
Score = 120 (47.3 bits), Expect = 0.00044, P = 0.00044
Identities = 23/50 (46%), Positives = 36/50 (72%)
Query: 441 HVKSERRQRGKLNERFVILKSMVPSVSKFDKVSILDDTIEYVQELERKVK 490
H SERR+R ++NE+ L+ +VP +K DK SILD+ IEY++ L+ +V+
Sbjct: 233 HNLSERRRRDRINEKLRALQELVPHCNKTDKASILDEAIEYLKSLQMQVQ 282
>UNIPROTKB|Q6YTU1 [details] [associations]
symbol:P0419H09.4 "cDNA clone:002-131-D10, full insert
sequence" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:AP004213
EMBL:AP008214 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238962 EMBL:HQ858861 EMBL:AP005918 EMBL:AK107626
RefSeq:NP_001062077.1 UniGene:Os.55174
EnsemblPlants:LOC_Os08g37730.1 GeneID:4345867 KEGG:osa:4345867
eggNOG:NOG250596 ProtClustDB:CLSN2919896 Uniprot:Q6YTU1
Length = 363
Score = 119 (46.9 bits), Expect = 0.00045, P = 0.00045
Identities = 26/77 (33%), Positives = 45/77 (58%)
Query: 430 SRLEAEETATNHVKSERRQRGKLNERFVILKSMVPS--VSKFDKVSILDDTIEYVQELER 487
+R E E H+ ER +R ++NE +L+S++P+ V + D+ SI+ I YV+E+E+
Sbjct: 131 NREEVESQRMTHIAVERNRRKQMNEYLAVLRSLMPASYVQRGDQASIIGGAINYVKEMEQ 190
Query: 488 KVKELESCRAKLEANYD 504
++ LE+ R A D
Sbjct: 191 LLQSLEAHRHARRARTD 207
>TAIR|locus:2115080 [details] [associations]
symbol:SPT "AT4G36930" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0009908 "flower
development" evidence=NAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;TAS]
[GO:0009409 "response to cold" evidence=IMP] [GO:0010114 "response
to red light" evidence=IMP] [GO:0010187 "negative regulation of
seed germination" evidence=IMP] [GO:0010154 "fruit development"
evidence=IMP] [GO:0048440 "carpel development" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0007623 "circadian
rhythm" evidence=IEP] InterPro:IPR011598 InterPro:IPR024097
InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0007623 GO:GO:0009409 GO:GO:0003700 GO:GO:0006351
GO:GO:0010114 GO:GO:0010187 GO:GO:0048440 GO:GO:0010154
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:Z99707 EMBL:AL161590 EMBL:AF319540
EMBL:AK229267 EMBL:BT026462 IPI:IPI00541204 PIR:B85436
RefSeq:NP_568010.1 UniGene:At.4639 ProteinModelPortal:Q9FUA4
SMR:Q9FUA4 IntAct:Q9FUA4 STRING:Q9FUA4 EnsemblPlants:AT4G36930.1
GeneID:829847 KEGG:ath:AT4G36930 TAIR:At4g36930 eggNOG:NOG276771
HOGENOM:HOG000090429 InParanoid:Q9FUA4 OMA:NAPEMIN PhylomeDB:Q9FUA4
ProtClustDB:CLSN2917674 Genevestigator:Q9FUA4 GermOnline:AT4G36930
Uniprot:Q9FUA4
Length = 373
Score = 123 (48.4 bits), Expect = 0.00049, Sum P(2) = 0.00049
Identities = 22/52 (42%), Positives = 40/52 (76%)
Query: 441 HVKSERRQRGKLNERFVILKSMVPSVSKFDKVSILDDTIEYVQELERKVKEL 492
H SE+R+R ++NE+ L+S++P+ +K DK S+LD+ IEY+++L+ +V+ L
Sbjct: 202 HNLSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQML 253
Score = 38 (18.4 bits), Expect = 0.00049, Sum P(2) = 0.00049
Identities = 13/47 (27%), Positives = 22/47 (46%)
Query: 233 TTMVPVVGYEVLEMASPDNNGSSGIKHNQPADDSFMVEGINGVASQV 279
TT ++G DN+ S + H+ P+D M + + G S+V
Sbjct: 73 TTTASLIGVHGSGDPHADNSRSL-VSHHPPSDSVLMSKRV-GDFSEV 117
>TAIR|locus:2168235 [details] [associations]
symbol:AT5G65320 "AT5G65320" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AB011479 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238962 EMBL:AY070095 EMBL:AY096704
EMBL:AF488625 IPI:IPI00548412 RefSeq:NP_201335.1 UniGene:At.28395
ProteinModelPortal:Q9FKQ6 SMR:Q9FKQ6 EnsemblPlants:AT5G65320.1
GeneID:836657 KEGG:ath:AT5G65320 TAIR:At5g65320 eggNOG:NOG237691
InParanoid:Q9FKQ6 OMA:PNDQASI PhylomeDB:Q9FKQ6
ProtClustDB:CLSN2916276 Genevestigator:Q9FKQ6 Uniprot:Q9FKQ6
Length = 296
Score = 116 (45.9 bits), Expect = 0.00064, P = 0.00064
Identities = 56/252 (22%), Positives = 111/252 (44%)
Query: 342 PQGHDLHYQSVLSSLLKTSHQLVSRPHFQNHSQESSFASWK-KGGLVSCK--KQRDGVSQ 398
P G L S+ +L +V SQ++S +S +SC +Q+ +++
Sbjct: 8 PHGFSLVETSLSYEMLDYFQNIVVSNSEDVASQQNSISSSSYSSATLSCSITEQKSHLTE 67
Query: 399 KLLKKILFEVPRIINYRLLES-SEDNHIKDDVSRLEAEETATNHVKSERRQRGKLNERFV 457
KL P Y + S + + + ++ E NH+ ER +R ++N
Sbjct: 68 KLS-------PLRERYGCGDFLSRKRRRRSEKTIVDKENQRMNHIAVERNRRKQMNHFLS 120
Query: 458 ILKSMVP-SVSK-FDKVSILDDTIEYVQELERKVKELES-CRA-KLEAN---YDN----- 505
ILKSM+P S S+ D+ SI++ TI Y+++LE++++ LE+ +A KL + + +
Sbjct: 121 ILKSMMPLSYSQPNDQASIIEGTISYLKKLEQRLQSLEAQLKATKLNQSPNIFSDFFMFP 180
Query: 506 --XXXXXXXXXXXXDIYESEPEFERFATADNINVSINEKDVQIEIKCPWREGMLLEIMDA 563
S +R ++ V++ E+ I++ + +L +I++
Sbjct: 181 QYSTATATATATASSSSSSHHHHKRLEVVADVEVTMVERHANIKVLTKTQPRLLFKIINE 240
Query: 564 ISNLHLYSHRFN 575
++L L + N
Sbjct: 241 FNSLGLSTLHLN 252
>TAIR|locus:2155543 [details] [associations]
symbol:HEC1 "HECATE 1" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0010500 "transmitting tissue
development" evidence=IGI] [GO:0048462 "carpel formation"
evidence=IMP] [GO:0048445 "carpel morphogenesis" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB020742 EMBL:AF488618 EMBL:AK228927 IPI:IPI00530790
RefSeq:NP_201507.1 UniGene:At.28829 ProteinModelPortal:Q9FHA7
SMR:Q9FHA7 IntAct:Q9FHA7 EnsemblPlants:AT5G67060.1 GeneID:836841
KEGG:ath:AT5G67060 TAIR:At5g67060 eggNOG:NOG267961
HOGENOM:HOG000242863 InParanoid:Q9FHA7 OMA:FLFNSTH PhylomeDB:Q9FHA7
ProtClustDB:CLSN2684406 Genevestigator:Q9FHA7 GO:GO:0048462
GO:GO:0010500 Uniprot:Q9FHA7
Length = 241
Score = 114 (45.2 bits), Expect = 0.00066, P = 0.00066
Identities = 44/186 (23%), Positives = 92/186 (49%)
Query: 324 HCLQEVEE-CNPTELTSLDPQGHDLHYQSVLSSL-LKTSHQLVSRPHFQ-------NHSQ 374
H ++++ E CNP + P H+ Y + +S ++ H + + P F+ N S
Sbjct: 11 HQMEKLPEFCNPNS-SFFSPD-HNNTYPFLFNSTHYQSDHSMTNEPGFRYGSGLLTNPSS 68
Query: 375 ESSFASWKKGGLV---SCKKQRDGVSQKLLKKILFEV----PRIINYRLLESSEDNHIKD 427
S ++ L + +G + +++++F + P I+ ++ + +++
Sbjct: 69 ISPNTAYSSVFLDKRNNSNNNNNGTNMAAMREMIFRIAVMQPIHIDPEAVKPPKRRNVR- 127
Query: 428 DVSRLEAEETATNHVKSERRQRGKLNERFVILKSMVPSVSKFDKVSILDDTIEYVQELER 487
+S+ + + A H RR+R ++ER IL+ +VP +K D S+LD+ I YV+ L++
Sbjct: 128 -ISK-DPQSVAARH----RRER--ISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKK 179
Query: 488 KVKELE 493
+V+ LE
Sbjct: 180 QVQSLE 185
>TAIR|locus:2065086 [details] [associations]
symbol:AT2G40200 "AT2G40200" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AF085279 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AF488586 EMBL:BT029997 EMBL:BT030051
IPI:IPI00547467 PIR:E84826 RefSeq:NP_181549.1 UniGene:At.37090
ProteinModelPortal:Q9XEF0 SMR:Q9XEF0 EnsemblPlants:AT2G40200.1
GeneID:818611 KEGG:ath:AT2G40200 TAIR:At2g40200 eggNOG:NOG318931
HOGENOM:HOG000095217 InParanoid:Q9XEF0 OMA:QPETISD PhylomeDB:Q9XEF0
ProtClustDB:CLSN2913057 ArrayExpress:Q9XEF0 Genevestigator:Q9XEF0
Uniprot:Q9XEF0
Length = 254
Score = 114 (45.2 bits), Expect = 0.00076, P = 0.00076
Identities = 26/71 (36%), Positives = 42/71 (59%)
Query: 423 NHIKDD-VSRLE-AEETATNHVKSERRQRGKLNERFVILKSMVPSVSKFDKVSILDDTIE 480
N DD V +E AE + +H +E+R+R ++N L+ +VP+ K DK ++L IE
Sbjct: 47 NFPADDCVGGIEKAESLSRSHRLAEKRRRDRINSHLTALRKLVPNSDKLDKAALLATVIE 106
Query: 481 YVQELERKVKE 491
V+EL++K E
Sbjct: 107 QVKELKQKAAE 117
>TAIR|locus:2012345 [details] [associations]
symbol:PIF3 "AT1G09530" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0009639 "response to red or far red
light" evidence=IMP] [GO:0010017 "red or far-red light signaling
pathway" evidence=RCA;IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0031539
"positive regulation of anthocyanin metabolic process"
evidence=IMP] [GO:0009740 "gibberellic acid mediated signaling
pathway" evidence=IMP] [GO:0009704 "de-etiolation" evidence=IMP]
[GO:0007623 "circadian rhythm" evidence=RCA] [GO:0009630
"gravitropism" evidence=RCA] [GO:0007165 "signal transduction"
evidence=TAS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC003970
GO:GO:0009585 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0010017
GO:GO:0009704 GO:GO:0009740 GO:GO:0031539 EMBL:AF100166
EMBL:AF251693 EMBL:AF088280 EMBL:AK117255 EMBL:EF193482
EMBL:EF193483 EMBL:EF193484 EMBL:EF193485 EMBL:EF193486
EMBL:EF193487 EMBL:EF193488 EMBL:EF193489 EMBL:EF193490
EMBL:EF193491 EMBL:EF193492 EMBL:EF193493 EMBL:EF193494
EMBL:EF193495 EMBL:EF193496 IPI:IPI00530297 PIR:H86228
RefSeq:NP_172424.1 RefSeq:NP_849626.1 UniGene:At.10926
ProteinModelPortal:O80536 SMR:O80536 DIP:DIP-33892N IntAct:O80536
STRING:O80536 EnsemblPlants:AT1G09530.1 EnsemblPlants:AT1G09530.2
GeneID:837479 KEGG:ath:AT1G09530 TAIR:At1g09530 eggNOG:NOG285764
InParanoid:O80536 KO:K12126 OMA:WENGQIS PhylomeDB:O80536
ProtClustDB:CLSN2679266 Genevestigator:O80536 GermOnline:AT1G09530
Uniprot:O80536
Length = 524
Score = 119 (46.9 bits), Expect = 0.00081, P = 0.00081
Identities = 22/54 (40%), Positives = 39/54 (72%)
Query: 437 TATNHVKSERRQRGKLNERFVILKSMVPSVSKFDKVSILDDTIEYVQELERKVK 490
+A H SERR+R ++NE+ L+ ++P+ +K DK S+LD+ IEY++ L+ +V+
Sbjct: 344 SAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKSLQLQVQ 397
>UNIPROTKB|Q69JI7 [details] [associations]
symbol:OSJNBa0026C08.39-1 "BHLH protein family-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP008215 EMBL:CM000146 EMBL:EU837261 EMBL:AP006169
EMBL:AP005759 RefSeq:NP_001063459.1 UniGene:Os.16741
EnsemblPlants:LOC_Os09g29930.1 GeneID:4347359 KEGG:osa:4347359
OMA:HNIVTSA ProtClustDB:CLSN2697427 Uniprot:Q69JI7
Length = 504
Score = 116 (45.9 bits), Expect = 0.00086, Sum P(2) = 0.00086
Identities = 23/57 (40%), Positives = 40/57 (70%)
Query: 439 TNHVKSERRQRGKLNERFVILKSMVP-SVSKFDKVSILDDTIEYVQELERKVKELES 494
+ H +E+R+R K+N+RF IL+ ++P S K DK + L + IEY++ L+ KV++ E+
Sbjct: 220 SKHSATEQRRRSKINDRFQILRELLPHSDQKRDKATFLLEVIEYIRFLQEKVQKFEA 276
Score = 47 (21.6 bits), Expect = 0.00086, Sum P(2) = 0.00086
Identities = 14/38 (36%), Positives = 17/38 (44%)
Query: 203 MISGNSSSGAGNMRDDKDLACAALCSQNLDTTMVPVVG 240
M SG+ SSG DD +A S +L V V G
Sbjct: 164 MDSGSRSSGGAGFDDDDGVAARREVSSSLKELTVRVDG 201
>TAIR|locus:2117773 [details] [associations]
symbol:AT4G28790 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AL161573
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL035353 EMBL:BT015828
EMBL:BT020214 IPI:IPI00521625 IPI:IPI00529771 IPI:IPI00915578
PIR:T04520 RefSeq:NP_194608.3 RefSeq:NP_974634.1 UniGene:At.31988
ProteinModelPortal:Q9SVU6 SMR:Q9SVU6 PRIDE:Q9SVU6
EnsemblPlants:AT4G28790.1 GeneID:829000 KEGG:ath:AT4G28790
TAIR:At4g28790 HOGENOM:HOG000240264 InParanoid:Q9SVU6
PhylomeDB:Q9SVU6 ProtClustDB:CLSN2680993 Genevestigator:Q9SVU6
Uniprot:Q9SVU6
Length = 413
Score = 122 (48.0 bits), Expect = 0.00088, Sum P(2) = 0.00088
Identities = 26/74 (35%), Positives = 43/74 (58%)
Query: 417 LESSEDNHIKDDVSRLEAEETATNHVKSERRQRGKLNERFVILKSMVPSVSKFDKVSILD 476
+E+ +D S + A H SERR+R K+NE L+ ++P +K D+ S+LD
Sbjct: 259 VENQGTEEARDSTSS-KRSRAAIMHKLSERRRRQKINEMMKALQELLPRCTKTDRSSMLD 317
Query: 477 DTIEYVQELERKVK 490
D IEYV+ L+ +++
Sbjct: 318 DVIEYVKSLQSQIQ 331
Score = 38 (18.4 bits), Expect = 0.00088, Sum P(2) = 0.00088
Identities = 10/28 (35%), Positives = 15/28 (53%)
Query: 280 QSWQFMDDEFSNCVHSVNSSDSI-SQTL 306
QS +DE ++ +H N D + SQ L
Sbjct: 79 QSLFIQEDEMASWLHQPNRQDYLYSQLL 106
>UNIPROTKB|Q7XLY9 [details] [associations]
symbol:OSJNBa0086O06.20 "OSJNBa0086O06.20 protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AL662981 UniGene:Os.52382 HOGENOM:HOG000238962
ProteinModelPortal:Q7XLY9 EnsemblPlants:LOC_Os04g50090.1
Gramene:Q7XLY9 OMA:RFFTYPQ Uniprot:Q7XLY9
Length = 362
Score = 116 (45.9 bits), Expect = 0.00095, P = 0.00095
Identities = 25/72 (34%), Positives = 45/72 (62%)
Query: 430 SRLEAEETATNHVKSERRQRGKLNERFVILKSMVPS--VSKFDKVSILDDTIEYVQELER 487
SR +AE H+ ER +R ++NE +L+S++P V + D+ SI+ I++V+ELE+
Sbjct: 86 SREDAESQRMTHIAVERNRRRQMNEYLAVLRSLMPESYVHRGDQASIVGGAIDFVKELEQ 145
Query: 488 KVKELESCRAKL 499
++ LE+ + L
Sbjct: 146 LLQSLEAQKRTL 157
>UNIPROTKB|Q6ESL3 [details] [associations]
symbol:OJ1294_G06.8 "DNA binding protein-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP005093 ProteinModelPortal:Q6ESL3
EnsemblPlants:LOC_Os09g24490.1 KEGG:dosa:Os09t0410700-00
Gramene:Q6ESL3 OMA:RRHECIA Uniprot:Q6ESL3
Length = 363
Score = 116 (45.9 bits), Expect = 0.00096, P = 0.00096
Identities = 22/70 (31%), Positives = 45/70 (64%)
Query: 428 DVSRLEAEETATNHVKSERRQRGKLNERFVILKSMVPSVSKFDKVSILDDTIEYVQELER 487
++ +A + +H ++ERR+R ++N L+S++P+ +K DK S+L + IE+V+EL+R
Sbjct: 97 EIMDAKALAASRSHSEAERRRRQRINGHLARLRSLLPNTTKTDKASLLAEVIEHVKELKR 156
Query: 488 KVKELESCRA 497
+ + + A
Sbjct: 157 QTTAIAAAAA 166
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.315 0.130 0.379 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 600 572 0.00080 120 3 11 23 0.43 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 77
No. of states in DFA: 624 (66 KB)
Total size of DFA: 344 KB (2173 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 54.54u 0.13s 54.67t Elapsed: 00:00:03
Total cpu time: 54.55u 0.13s 54.68t Elapsed: 00:00:03
Start: Thu May 9 18:18:45 2013 End: Thu May 9 18:18:48 2013