BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 007530
(600 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LZ19|PP364_ARATH Pentatricopeptide repeat-containing protein At5g04780
OS=Arabidopsis thaliana GN=PCMP-H16 PE=2 SV=2
Length = 635
Score = 751 bits (1938), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 354/594 (59%), Positives = 452/594 (76%), Gaps = 9/594 (1%)
Query: 15 SFSSSAIASASANANATELSTLQATLQSCARERAPVRGKVCHAKIIGMGLNNDTLTSNIL 74
S+ ++ + + + + LQ CAR A + K CH KII + L D N+L
Sbjct: 43 SYDQEEVSPGRYSNEFSNRNLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVL 102
Query: 75 INFYSKCGLISGARKVFDEMPQRCIVSWNTIIGSYTTNGREQEAVALFINMLREGKTPYS 134
IN YSKCG + AR+VFD M +R +VSWNT+IG YT N E EA+ +F+ M EG +S
Sbjct: 103 INAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEG-FKFS 161
Query: 135 EFTVSSVLCACAAKRDVFECKQLHVFALKAAMDRNVFVGTALLDVYAKCGLISDASRVFE 194
EFT+SSVL AC D ECK+LH ++K +D N++VGTALLD+YAKCG+I DA +VFE
Sbjct: 162 EFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFE 221
Query: 195 SMPERNEVTWSSMVAGFVQNELYEEALILFRRAQVLGLEYNQFTISSVICACAGLAALIQ 254
SM +++ VTWSSMVAG+VQN+ YEEAL+L+RRAQ + LE NQFT+SSVICAC+ LAALI+
Sbjct: 222 SMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIE 281
Query: 255 GKQVHAVLCKTGFGSNMFAASSLVDMYAKCGCVVDAYFVFSGIEEKNVVLWNTMISGFSR 314
GKQ+HAV+CK+GFGSN+F ASS VDMYAKCG + ++Y +FS ++EKN+ LWNT+ISGF++
Sbjct: 282 GKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAK 341
Query: 315 HARSVEVMILFEKMQQAGLHPNEQTYISVLSACSHIGMVEKGKSYFDLMVKQHNVLPNVF 374
HAR EVMILFEKMQQ G+HPNE T+ S+LS C H G+VE+G+ +F LM + + PNV
Sbjct: 342 HARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVV 401
Query: 375 HYSCMIDILGRAGLIHEAYDLILNMPFDATASMWGSLLASCRNYRNLELAEIAAKQLFGM 434
HYSCM+DILGRAGL+ EAY+LI ++PFD TAS+WGSLLASCR Y+NLELAE+AA++LF +
Sbjct: 402 HYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFEL 461
Query: 435 EPDNAGNHLLLSNIYAANRRWEEVARARKLIRDSEVKKEKSKSWVEIK--------GKRN 486
EP+NAGNH+LLSNIYAAN++WEE+A++RKL+RD +VKK + KSW++IK G+
Sbjct: 462 EPENAGNHVLLSNIYAANKQWEEIAKSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESG 521
Query: 487 HPRIAEIYSKLEKLVEEMKKLGYKPETEHDLHDVEDSRKQELLIHHSEKLALTFGLMCLC 546
HPRI EI S L+ LV + +K GYKP EH+LHDVE +K+ELL+ HSEKLAL FGLMCL
Sbjct: 522 HPRIREICSTLDNLVIKFRKFGYKPSVEHELHDVEIGKKEELLMQHSEKLALVFGLMCLP 581
Query: 547 PGVPIRIMKNLRICGDCHSFMKFASRIAGRETIVRDLNRFHHFTNGSCSCWDFW 600
P+RIMKNLRIC DCH FMK AS R IVRD+NRFHHF++G CSC DFW
Sbjct: 582 ESSPVRIMKNLRICVDCHEFMKAASMATRRFIIVRDVNRFHHFSDGHCSCGDFW 635
>sp|Q9LIQ7|PP252_ARATH Pentatricopeptide repeat-containing protein At3g24000,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H87 PE=2
SV=1
Length = 633
Score = 492 bits (1266), Expect = e-138, Method: Compositional matrix adjust.
Identities = 238/569 (41%), Positives = 372/569 (65%), Gaps = 10/569 (1%)
Query: 40 LQSCARERAPVRGKVCHAKIIGMGLNNDTLTSNILINFYSKCGLISGARKVFDEMPQRCI 99
L+ C + ++G++ HA I+ +D + N L+N Y+KCG + ARKVF++MPQR
Sbjct: 67 LKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDF 126
Query: 100 VSWNTIIGSYTTNGREQEAVALFINMLREGKTPYSEFTVSSVLCACAAKRDVFECKQLHV 159
V+W T+I Y+ + R +A+ F MLR G +P +EFT+SSV+ A AA+R QLH
Sbjct: 127 VTWTTLISGYSQHDRPCDALLFFNQMLRFGYSP-NEFTLSSVIKAAAAERRGCCGHQLHG 185
Query: 160 FALKAAMDRNVFVGTALLDVYAKCGLISDASRVFESMPERNEVTWSSMVAGFVQNELYEE 219
F +K D NV VG+ALLD+Y + GL+ DA VF+++ RN+V+W++++AG + E+
Sbjct: 186 FCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEK 245
Query: 220 ALILFRRAQVLGLEYNQFTISSVICACAGLAALIQGKQVHAVLCKTGFGSNMFAASSLVD 279
AL LF+ G + F+ +S+ AC+ L QGK VHA + K+G FA ++L+D
Sbjct: 246 ALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLD 305
Query: 280 MYAKCGCVVDAYFVFSGIEEKNVVLWNTMISGFSRHARSVEVMILFEKMQQAGLHPNEQT 339
MYAK G + DA +F + +++VV WN++++ +++H E + FE+M++ G+ PNE +
Sbjct: 306 MYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEIS 365
Query: 340 YISVLSACSHIGMVEKGKSYFDLMVKQHNVLPNVFHYSCMIDILGRAGLIHEAYDLILNM 399
++SVL+ACSH G++++G Y++LM K+ ++P +HY ++D+LGRAG ++ A I M
Sbjct: 366 FLSVLTACSHSGLLDEGWHYYELM-KKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEM 424
Query: 400 PFDATASMWGSLLASCRNYRNLELAEIAAKQLFGMEPDNAGNHLLLSNIYAANRRWEEVA 459
P + TA++W +LL +CR ++N EL AA+ +F ++PD+ G H++L NIYA+ RW + A
Sbjct: 425 PIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAA 484
Query: 460 RARKLIRDSEVKKEKSKSWVEIK--------GKRNHPRIAEIYSKLEKLVEEMKKLGYKP 511
R RK +++S VKKE + SWVEI+ HP+ EI K E+++ ++K+LGY P
Sbjct: 485 RVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKELGYVP 544
Query: 512 ETEHDLHDVEDSRKQELLIHHSEKLALTFGLMCLCPGVPIRIMKNLRICGDCHSFMKFAS 571
+T H + V+ ++ L +HSEK+AL F L+ PG I I KN+R+CGDCH+ +K AS
Sbjct: 545 DTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHTAIKLAS 604
Query: 572 RIAGRETIVRDLNRFHHFTNGSCSCWDFW 600
++ GRE IVRD NRFHHF +G+CSC D+W
Sbjct: 605 KVVGREIIVRDTNRFHHFKDGNCSCKDYW 633
Score = 172 bits (437), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 93/291 (31%), Positives = 160/291 (54%), Gaps = 2/291 (0%)
Query: 124 NMLREGKTPYSEFTVSSVLCACAAKRDVFECKQLHVFALKAAMDRNVFVGTALLDVYAKC 183
N L P +++L C + + + + +H L++ ++ +G LL++YAKC
Sbjct: 49 NDLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKC 108
Query: 184 GLISDASRVFESMPERNEVTWSSMVAGFVQNELYEEALILFRRAQVLGLEYNQFTISSVI 243
G + +A +VFE MP+R+ VTW+++++G+ Q++ +AL+ F + G N+FT+SSVI
Sbjct: 109 GSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVI 168
Query: 244 CACAGLAALIQGKQVHAVLCKTGFGSNMFAASSLVDMYAKCGCVVDAYFVFSGIEEKNVV 303
A A G Q+H K GF SN+ S+L+D+Y + G + DA VF +E +N V
Sbjct: 169 KAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDV 228
Query: 304 LWNTMISGFSRHARSVEVMILFEKMQQAGLHPNEQTYISVLSACSHIGMVEKGKSYFDLM 363
WN +I+G +R + + + + LF+ M + G P+ +Y S+ ACS G +E+GK M
Sbjct: 229 SWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYM 288
Query: 364 VKQHNVLPNVFHYSCMIDILGRAGLIHEAYDLILNMPFDATASMWGSLLAS 414
+K L F + ++D+ ++G IH+A + + S W SLL +
Sbjct: 289 IKSGEKLV-AFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVS-WNSLLTA 337
Score = 140 bits (352), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 147/282 (52%), Gaps = 2/282 (0%)
Query: 35 TLQATLQSCARERAPVRGKVCHAKIIGMGLNNDTLTSNILINFYSKCGLISGARKVFDEM 94
TL + +++ A ER G H + G +++ + L++ Y++ GL+ A+ VFD +
Sbjct: 163 TLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDAL 222
Query: 95 PQRCIVSWNTIIGSYTTNGREQEAVALFINMLREGKTPYSEFTVSSVLCACAAKRDVFEC 154
R VSWN +I + ++A+ LF MLR+G P S F+ +S+ AC++ + +
Sbjct: 223 ESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRP-SHFSYASLFGACSSTGFLEQG 281
Query: 155 KQLHVFALKAAMDRNVFVGTALLDVYAKCGLISDASRVFESMPERNEVTWSSMVAGFVQN 214
K +H + +K+ F G LLD+YAK G I DA ++F+ + +R+ V+W+S++ + Q+
Sbjct: 282 KWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQH 341
Query: 215 ELYEEALILFRRAQVLGLEYNQFTISSVICACAGLAALIQGKQVHAVLCKTGFGSNMFAA 274
+EA+ F + +G+ N+ + SV+ AC+ L +G + ++ K G +
Sbjct: 342 GFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHY 401
Query: 275 SSLVDMYAKCGCVVDAY-FVFSGIEEKNVVLWNTMISGFSRH 315
++VD+ + G + A F+ E +W +++ H
Sbjct: 402 VTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMH 443
>sp|Q9LW63|PP251_ARATH Putative pentatricopeptide repeat-containing protein At3g23330
OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1
Length = 715
Score = 457 bits (1175), Expect = e-127, Method: Compositional matrix adjust.
Identities = 242/637 (37%), Positives = 380/637 (59%), Gaps = 48/637 (7%)
Query: 11 FYYKSFSSSAIAS---ASANANATELSTLQATLQSCARERAPVRGKVCHAKIIGMGLNND 67
F +S S A+AS A+ + + + L+SC G+ H I+ +G++ D
Sbjct: 80 FTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCD 139
Query: 68 TLTSNILINFYSKC-GL-----------------------------------ISGARKVF 91
T N L+N Y+K G+ I R+VF
Sbjct: 140 LYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVF 199
Query: 92 DEMPQRCIVSWNTIIGSYTTNGREQEAVALFINMLREGKTPYSEFTVSSVLCACAAKRDV 151
+ MP++ +VS+NTII Y +G ++A+ + M P S FT+SSVL + DV
Sbjct: 200 EVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDS-FTLSSVLPIFSEYVDV 258
Query: 152 FECKQLHVFALKAAMDRNVFVGTALLDVYAKCGLISDASRVFESMPERNEVTWSSMVAGF 211
+ K++H + ++ +D +V++G++L+D+YAK I D+ RVF + R+ ++W+S+VAG+
Sbjct: 259 IKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGY 318
Query: 212 VQNELYEEALILFRRAQVLGLEYNQFTISSVICACAGLAALIQGKQVHAVLCKTGFGSNM 271
VQN Y EAL LFR+ ++ SSVI ACA LA L GKQ+H + + GFGSN+
Sbjct: 319 VQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNI 378
Query: 272 FAASSLVDMYAKCGCVVDAYFVFSGIEEKNVVLWNTMISGFSRHARSVEVMILFEKMQQA 331
F AS+LVDMY+KCG + A +F + + V W +I G + H E + LFE+M++
Sbjct: 379 FIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQ 438
Query: 332 GLHPNEQTYISVLSACSHIGMVEKGKSYFDLMVKQHNVLPNVFHYSCMIDILGRAGLIHE 391
G+ PN+ +++VL+ACSH+G+V++ YF+ M K + + + HY+ + D+LGRAG + E
Sbjct: 439 GVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEE 498
Query: 392 AYDLILNMPFDATASMWGSLLASCRNYRNLELAEIAAKQLFGMEPDNAGNHLLLSNIYAA 451
AY+ I M + T S+W +LL+SC ++NLELAE A+++F ++ +N G ++L+ N+YA+
Sbjct: 499 AYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYAS 558
Query: 452 NRRWEEVARARKLIRDSEVKKEKSKSWVEIK--------GKRNHPRIAEIYSKLEKLVEE 503
N RW+E+A+ R +R ++K+ + SW+E+K G R+HP + +I L+ ++E+
Sbjct: 559 NGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQ 618
Query: 504 MKKLGYKPETEHDLHDVEDSRKQELLIHHSEKLALTFGLMCLCPGVPIRIMKNLRICGDC 563
M+K GY +T LHDV++ K+ELL HSE+LA+ FG++ PG IR+ KN+RIC DC
Sbjct: 619 MEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINTEPGTTIRVTKNIRICTDC 678
Query: 564 HSFMKFASRIAGRETIVRDLNRFHHFTNGSCSCWDFW 600
H +KF S+I RE IVRD +RFHHF G+CSC D+W
Sbjct: 679 HVAIKFISKITEREIIVRDNSRFHHFNRGNCSCGDYW 715
Score = 160 bits (406), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 103/400 (25%), Positives = 202/400 (50%), Gaps = 39/400 (9%)
Query: 36 LQATLQSCARERAPVRGKVCHAKIIGMGLNNDTLTSNILINFYSKCGLISGARKVFDEMP 95
++ +++ R ++ + K HA+ I + T +++I+I+ Y+ L+ A +F +
Sbjct: 8 IKTLIKNPTRIKSKSQAKQLHAQFIRTQSLSHT-SASIVISIYTNLKLLHEALLLFKTLK 66
Query: 96 QRCIVSWNTIIGSYTTNGREQEAVALFINMLREGKTPYSEFTVSSVLCACAAKRDVFECK 155
+++W ++I +T +A+A F+ M G+ P SVL +C D+ +
Sbjct: 67 SPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCP-DHNVFPSVLKSCTMMMDLRFGE 125
Query: 156 QLHVFALKAAMDRNVFVGTALLDVYAK-CGL----------------------------- 185
+H F ++ MD +++ G AL+++YAK G+
Sbjct: 126 SVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAET 185
Query: 186 ------ISDASRVFESMPERNEVTWSSMVAGFVQNELYEEALILFRRAQVLGLEYNQFTI 239
I RVFE MP ++ V++++++AG+ Q+ +YE+AL + R L+ + FT+
Sbjct: 186 CIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTL 245
Query: 240 SSVICACAGLAALIQGKQVHAVLCKTGFGSNMFAASSLVDMYAKCGCVVDAYFVFSGIEE 299
SSV+ + +I+GK++H + + G S+++ SSLVDMYAK + D+ VFS +
Sbjct: 246 SSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYC 305
Query: 300 KNVVLWNTMISGFSRHARSVEVMILFEKMQQAGLHPNEQTYISVLSACSHIGMVEKGKSY 359
++ + WN++++G+ ++ R E + LF +M A + P + SV+ AC+H+ + GK
Sbjct: 306 RDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQL 365
Query: 360 FDLMVKQHNVLPNVFHYSCMIDILGRAGLIHEAYDLILNM 399
+++ N+F S ++D+ + G I A + M
Sbjct: 366 HGYVLRG-GFGSNIFIASALVDMYSKCGNIKAARKIFDRM 404
>sp|Q9SY02|PP301_ARATH Pentatricopeptide repeat-containing protein At4g02750
OS=Arabidopsis thaliana GN=PCMP-H24 PE=3 SV=1
Length = 781
Score = 454 bits (1167), Expect = e-126, Method: Compositional matrix adjust.
Identities = 223/546 (40%), Positives = 340/546 (62%), Gaps = 25/546 (4%)
Query: 67 DTLTSNILINFYSKCGLISGARKVFDEMPQRCIVSWNTIIGSYTTNGREQEAVALFINML 126
D ++ N +I Y++ G I AR++FDE P + + +W ++ Y N +EA LF M
Sbjct: 249 DVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMP 308
Query: 127 REGKTPYSEFTVSSV----LCACAAKRDVFECKQLHVFALKAAMDRNVFVGTALLDVYAK 182
+ ++ V + DV C RNV ++ YA+
Sbjct: 309 ERNEVSWNAMLAGYVQGERMEMAKELFDVMPC-------------RNVSTWNTMITGYAQ 355
Query: 183 CGLISDASRVFESMPERNEVTWSSMVAGFVQNELYEEALILFRRAQVLGLEYNQFTISSV 242
CG IS+A +F+ MP+R+ V+W++M+AG+ Q+ EAL LF + + G N+ + SS
Sbjct: 356 CGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSA 415
Query: 243 ICACAGLAALIQGKQVHAVLCKTGFGSNMFAASSLVDMYAKCGCVVDAYFVFSGIEEKNV 302
+ CA + AL GKQ+H L K G+ + F ++L+ MY KCG + +A +F + K++
Sbjct: 416 LSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDI 475
Query: 303 VLWNTMISGFSRHARSVEVMILFEKMQQAGLHPNEQTYISVLSACSHIGMVEKGKSYFDL 362
V WNTMI+G+SRH + FE M++ GL P++ T ++VLSACSH G+V+KG+ YF
Sbjct: 476 VSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYT 535
Query: 363 MVKQHNVLPNVFHYSCMIDILGRAGLIHEAYDLILNMPFDATASMWGSLLASCRNYRNLE 422
M + + V+PN HY+CM+D+LGRAGL+ +A++L+ NMPF+ A++WG+LL + R + N E
Sbjct: 536 MTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTE 595
Query: 423 LAEIAAKQLFGMEPDNAGNHLLLSNIYAANRRWEEVARARKLIRDSEVKKEKSKSWVEIK 482
LAE AA ++F MEP+N+G ++LLSN+YA++ RW +V + R +RD VKK SW+EI+
Sbjct: 596 LAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQ 655
Query: 483 GKRN--------HPRIAEIYSKLEKLVEEMKKLGYKPETEHDLHDVEDSRKQELLIHHSE 534
K + HP EI++ LE+L MKK GY +T LHDVE+ K+ ++ +HSE
Sbjct: 656 NKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKTSVVLHDVEEEEKERMVRYHSE 715
Query: 535 KLALTFGLMCLCPGVPIRIMKNLRICGDCHSFMKFASRIAGRETIVRDLNRFHHFTNGSC 594
+LA+ +G+M + G PIR++KNLR+C DCH+ +K+ +RI GR I+RD NRFHHF +GSC
Sbjct: 716 RLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMARITGRLIILRDNNRFHHFKDGSC 775
Query: 595 SCWDFW 600
SC D+W
Sbjct: 776 SCGDYW 781
Score = 115 bits (289), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 93/354 (26%), Positives = 170/354 (48%), Gaps = 37/354 (10%)
Query: 65 NNDTLTSNILINFYSKCGLISGARKVFDEMPQRCIVSWNTIIGSYTTNGREQEAVALFIN 124
++D N+ I+ Y + G + A +VF MP+ VS+N +I Y NG + A LF
Sbjct: 61 DSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDE 120
Query: 125 MLREGKTPYSEFTVSSVLCACAAK-RDVFECKQLHVFALKAAMDRNVFVGTALLDVYAKC 183
M P + +V+ + R++ + ++L + +R+V +L YA+
Sbjct: 121 M------PERDLVSWNVMIKGYVRNRNLGKAREL----FEIMPERDVCSWNTMLSGYAQN 170
Query: 184 GLISDASRVFESMPERNEVTWSSMVAGFVQNELYEEALILFRRAQVLGLEYNQFTISSVI 243
G + DA VF+ MPE+N+V+W+++++ +VQN EEA +LF+ + + + S
Sbjct: 171 GCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRE-------NWALVSWN 223
Query: 244 CACAGLAALIQGKQVHAVLCKTGFGS----NMFAASSLVDMYAKCGCVVDAYFVFSGIEE 299
C G K+ V + F S ++ + ++++ YA+ G + +A +F
Sbjct: 224 CLLGGFV-----KKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPV 278
Query: 300 KNVVLWNTMISGFSRHARSVEVMILFEKMQQAGLHPNEQTYISVLSACSHIGMVEKGKSY 359
++V W M+SG+ ++ E LF+KM + NE ++ ++L+ +E K
Sbjct: 279 QDVFTWTAMVSGYIQNRMVEEARELFDKMPER----NEVSWNAMLAGYVQGERMEMAKEL 334
Query: 360 FDLMVKQHNVLPNVFHYSCMIDILGRAGLIHEAYDLILNMPFDATASMWGSLLA 413
FD+M + NV ++ MI + G I EA +L MP S W +++A
Sbjct: 335 FDVMPCR-----NVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVS-WAAMIA 382
Score = 84.3 bits (207), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 89/181 (49%), Gaps = 9/181 (4%)
Query: 34 STLQATLQSCARERAPVRGKVCHAKIIGMGLNNDTLTSNILINFYSKCGLISGARKVFDE 93
S+ + L +CA A GK H +++ G N L+ Y KCG I A +F E
Sbjct: 410 SSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKE 469
Query: 94 MPQRCIVSWNTIIGSYTTNGREQEAVALFINMLREGKTPYSEFTVSSVLCACAAKRDVFE 153
M + IVSWNT+I Y+ +G + A+ F +M REG P + T+ +VL AC+ V +
Sbjct: 470 MAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKP-DDATMVAVLSACSHTGLVDK 528
Query: 154 CKQLHVFALKAAMDRNVFVGTA----LLDVYAKCGLISDASRVFESMP-ERNEVTWSSMV 208
+Q + D V + ++D+ + GL+ DA + ++MP E + W +++
Sbjct: 529 GRQ---YFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLL 585
Query: 209 A 209
Sbjct: 586 G 586
>sp|Q9SI53|PP147_ARATH Pentatricopeptide repeat-containing protein At2g03880,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H44 PE=2
SV=1
Length = 630
Score = 453 bits (1166), Expect = e-126, Method: Compositional matrix adjust.
Identities = 238/589 (40%), Positives = 353/589 (59%), Gaps = 14/589 (2%)
Query: 20 AIASASANANATELSTLQATLQSCARERAPVRGKVCHAKIIGMGLNNDTLTSNILINFYS 79
A+ S ++ + +T ++ C RA G + + G N+LIN Y
Sbjct: 48 AMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYV 107
Query: 80 KCGLISGARKVFDEMPQRCIVSWNTIIGSYTTNGREQEAVALFINMLREGKTPYSEFTVS 139
K L++ A ++FD+MPQR ++SW T+I +Y+ Q+A+ L + MLR+ P + +T S
Sbjct: 108 KFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRP-NVYTYS 166
Query: 140 SVLCACAAKRDVFECKQLHVFALKAAMDRNVFVGTALLDVYAKCGLISDASRVFESMPER 199
SVL +C DV + LH +K ++ +VFV +AL+DV+AK G DA VF+ M
Sbjct: 167 SVLRSCNGMSDV---RMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTG 223
Query: 200 NEVTWSSMVAGFVQNELYEEALILFRRAQVLGLEYNQFTISSVICACAGLAALIQGKQVH 259
+ + W+S++ GF QN + AL LF+R + G Q T++SV+ AC GLA L G Q H
Sbjct: 224 DAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAH 283
Query: 260 AVLCKTGFGSNMFAASSLVDMYAKCGCVVDAYFVFSGIEEKNVVLWNTMISGFSRHARSV 319
+ K + ++ ++LVDMY KCG + DA VF+ ++E++V+ W+TMISG +++ S
Sbjct: 284 VHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQ 341
Query: 320 EVMILFEKMQQAGLHPNEQTYISVLSACSHIGMVEKGKSYFDLMVKQHNVLPNVFHYSCM 379
E + LFE+M+ +G PN T + VL ACSH G++E G YF M K + + P HY CM
Sbjct: 342 EALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCM 401
Query: 380 IDILGRAGLIHEAYDLILNMPFDATASMWGSLLASCRNYRNLELAEIAAKQLFGMEPDNA 439
ID+LG+AG + +A L+ M + A W +LL +CR RN+ LAE AAK++ ++P++A
Sbjct: 402 IDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDA 461
Query: 440 GNHLLLSNIYAANRRWEEVARARKLIRDSEVKKEKSKSWVEIK--------GKRNHPRIA 491
G + LLSNIYA +++W+ V R +RD +KKE SW+E+ G +HP+I
Sbjct: 462 GTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIV 521
Query: 492 EIYSKLEKLVEEMKKLGYKPETEHDLHDVEDSRKQELLIHHSEKLALTFGLMCLCPGVPI 551
E+ KL +L+ + +GY PET L D+E + ++ L HHSEKLAL FGLM L I
Sbjct: 522 EVSKKLNQLIHRLTGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAFGLMTLPIEKVI 581
Query: 552 RIMKNLRICGDCHSFMKFASRIAGRETIVRDLNRFHHFTNGSCSCWDFW 600
RI KNLRICGDCH F K AS++ R ++RD R+HHF +G CSC D+W
Sbjct: 582 RIRKNLRICGDCHVFCKLASKLEIRSIVIRDPIRYHHFQDGKCSCGDYW 630
>sp|Q9SR82|PP219_ARATH Putative pentatricopeptide repeat-containing protein At3g08820
OS=Arabidopsis thaliana GN=PCMP-H84 PE=3 SV=1
Length = 685
Score = 449 bits (1154), Expect = e-125, Method: Compositional matrix adjust.
Identities = 223/574 (38%), Positives = 347/574 (60%), Gaps = 9/574 (1%)
Query: 35 TLQATLQSCARERAPVRGKVCHAKIIGMGLNNDTLTSNILINFYSKCGLISGARKVFDEM 94
T L++C R + G H+ ++ G N+D L++ YS G ++ A K+FDE+
Sbjct: 113 TFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEI 172
Query: 95 PQRCIVSWNTIIGSYTTNGREQEAVALFINMLREGKTPYSEFTVSSVLCACAAKRDVFEC 154
P R +V+W + YTT+GR +EA+ LF M+ G P S F V VL AC D+
Sbjct: 173 PDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQ-VLSACVHVGDLDSG 231
Query: 155 KQLHVFALKAAMDRNVFVGTALLDVYAKCGLISDASRVFESMPERNEVTWSSMVAGFVQN 214
+ + + + M +N FV T L+++YAKCG + A VF+SM E++ VTWS+M+ G+ N
Sbjct: 232 EWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASN 291
Query: 215 ELYEEALILFRRAQVLGLEYNQFTISSVICACAGLAALIQGKQVHAVLCKTGFGSNMFAA 274
+E + LF + L+ +QF+I + +CA L AL G+ +++ + F +N+F A
Sbjct: 292 SFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMA 351
Query: 275 SSLVDMYAKCGCVVDAYFVFSGIEEKNVVLWNTMISGFSRHARSVEVMILFEKMQQAGLH 334
++L+DMYAKCG + + VF ++EK++V+ N ISG +++ +F + ++ G+
Sbjct: 352 NALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGIS 411
Query: 335 PNEQTYISVLSACSHIGMVEKGKSYFDLMVKQHNVLPNVFHYSCMIDILGRAGLIHEAYD 394
P+ T++ +L C H G+++ G +F+ + + + V HY CM+D+ GRAG++ +AY
Sbjct: 412 PDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYR 471
Query: 395 LILNMPFDATASMWGSLLASCRNYRNLELAEIAAKQLFGMEPDNAGNHLLLSNIYAANRR 454
LI +MP A +WG+LL+ CR ++ +LAE K+L +EP NAGN++ LSNIY+ R
Sbjct: 472 LICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGR 531
Query: 455 WEEVARARKLIRDSEVKKEKSKSWVEIKGK--------RNHPRIAEIYSKLEKLVEEMKK 506
W+E A R ++ +KK SW+E++GK ++HP +IY+KLE L EM+
Sbjct: 532 WDEAAEVRDMMNKKGMKKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNEMRL 591
Query: 507 LGYKPETEHDLHDVEDSRKQELLIHHSEKLALTFGLMCLCPGVPIRIMKNLRICGDCHSF 566
+G+ P TE DVE+ K+ +L +HSEKLA+ GL+ G IR++KNLR+CGDCH
Sbjct: 592 MGFVPTTEFVFFDVEEEEKERVLGYHSEKLAVALGLISTDHGQVIRVVKNLRVCGDCHEV 651
Query: 567 MKFASRIAGRETIVRDLNRFHHFTNGSCSCWDFW 600
MK S+I RE +VRD NRFH FTNGSCSC D+W
Sbjct: 652 MKLISKITRREIVVRDNNRFHCFTNGSCSCNDYW 685
Score = 162 bits (411), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 107/425 (25%), Positives = 210/425 (49%), Gaps = 15/425 (3%)
Query: 19 SAIASASANANATELSTLQATLQSCARERAPVRGKVCHAKIIGMGLNNDTLTSNILIN-- 76
S + SA + ++ TL + +C K H +I L++DT N+L+
Sbjct: 2 SIVTVPSATSKVQQIKTLISV--ACTVNHL----KQIHVSLINHHLHHDTFLVNLLLKRT 55
Query: 77 -FYSKCGLISGARKVFDEMPQRCIVSWNTIIGSYTTNGREQEAVALFINMLREGKTPYSE 135
F+ + + +F I +N++I + N E + LF+++ + G +
Sbjct: 56 LFFRQTKY---SYLLFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHG- 111
Query: 136 FTVSSVLCACAAKRDVFECKQLHVFALKAAMDRNVFVGTALLDVYAKCGLISDASRVFES 195
FT VL AC LH +K + +V T+LL +Y+ G ++DA ++F+
Sbjct: 112 FTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDE 171
Query: 196 MPERNEVTWSSMVAGFVQNELYEEALILFRRAQVLGLEYNQFTISSVICACAGLAALIQG 255
+P+R+ VTW+++ +G+ + + EA+ LF++ +G++ + + I V+ AC + L G
Sbjct: 172 IPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSG 231
Query: 256 KQVHAVLCKTGFGSNMFAASSLVDMYAKCGCVVDAYFVFSGIEEKNVVLWNTMISGFSRH 315
+ + + + N F ++LV++YAKCG + A VF + EK++V W+TMI G++ +
Sbjct: 232 EWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASN 291
Query: 316 ARSVEVMILFEKMQQAGLHPNEQTYISVLSACSHIGMVEKGKSYFDLMVKQHNVLPNVFH 375
+ E + LF +M Q L P++ + + LS+C+ +G ++ G+ L + +H L N+F
Sbjct: 292 SFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISL-IDRHEFLTNLFM 350
Query: 376 YSCMIDILGRAGLIHEAYDLILNMPFDATASMWGSLLASCRN-YRNLELAEIAAKQLFGM 434
+ +ID+ + G + +++ M M ++ +N + L A + G+
Sbjct: 351 ANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGI 410
Query: 435 EPDNA 439
PD +
Sbjct: 411 SPDGS 415
>sp|Q0WSH6|PP312_ARATH Pentatricopeptide repeat-containing protein At4g14850
OS=Arabidopsis thaliana GN=LOI1 PE=1 SV=1
Length = 684
Score = 447 bits (1150), Expect = e-124, Method: Compositional matrix adjust.
Identities = 237/576 (41%), Positives = 331/576 (57%), Gaps = 11/576 (1%)
Query: 35 TLQATLQSCARERAPVRGKVCHAKIIGMGLNNDTLTSNILINFYSKCGLISGARKVFDEM 94
T ++ A R PV GK HA + G D + Y K L ARK+FDE+
Sbjct: 110 TFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEI 169
Query: 95 PQRCIVSWNTIIGSYTTNGREQEAVALFINMLREGKTPYSEFTVSSVLCACAAKRDVFEC 154
P+R + +WN I + T+GR +EA+ FI R P S T + L AC+ +
Sbjct: 170 PERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNS-ITFCAFLNACSDWLHLNLG 228
Query: 155 KQLHVFALKAAMDRNVFVGTALLDVYAKCGLISDASRVFESMPERNEVTWSSMVAGFVQN 214
QLH L++ D +V V L+D Y KC I + +F M +N V+W S+VA +VQN
Sbjct: 229 MQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQN 288
Query: 215 ELYEEALILFRRAQVLGLEYNQFTISSVICACAGLAALIQGKQVHAVLCKTGFGSNMFAA 274
E+A +L+ R++ +E + F ISSV+ ACAG+A L G+ +HA K +F
Sbjct: 289 HEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVG 348
Query: 275 SSLVDMYAKCGCVVDAYFVFSGIEEKNVVLWNTMISGFSRHARSVEVMILFEKM--QQAG 332
S+LVDMY KCGC+ D+ F + EKN+V N++I G++ + + LFE+M + G
Sbjct: 349 SALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCG 408
Query: 333 LHPNEQTYISVLSACSHIGMVEKGKSYFDLMVKQHNVLPNVFHYSCMIDILGRAGLIHEA 392
PN T++S+LSACS G VE G FD M + + P HYSC++D+LGRAG++ A
Sbjct: 409 PTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERA 468
Query: 393 YDLILNMPFDATASMWGSLLASCRNYRNLELAEIAAKQLFGMEPDNAGNHLLLSNIYAAN 452
Y+ I MP T S+WG+L +CR + +L +AA+ LF ++P ++GNH+LLSN +AA
Sbjct: 469 YEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAA 528
Query: 453 RRWEEVARARKLIRDSEVKKEKSKSWVEIKGK--------RNHPRIAEIYSKLEKLVEEM 504
RW E R+ ++ +KK SW+ +K + R+H EI + L KL EM
Sbjct: 529 GRWAEANTVREELKGVGIKKGAGYSWITVKNQVHAFQAKDRSHILNKEIQTTLAKLRNEM 588
Query: 505 KKLGYKPETEHDLHDVEDSRKQELLIHHSEKLALTFGLMCLCPGVPIRIMKNLRICGDCH 564
+ GYKP+ + L+D+E+ K + HHSEKLAL FGL+ L VPIRI KNLRICGDCH
Sbjct: 589 EAAGYKPDLKLSLYDLEEEEKAAEVSHHSEKLALAFGLLSLPLSVPIRITKNLRICGDCH 648
Query: 565 SFMKFASRIAGRETIVRDLNRFHHFTNGSCSCWDFW 600
SF KF S RE IVRD NRFH F +G CSC D+W
Sbjct: 649 SFFKFVSGSVKREIIVRDNNRFHRFKDGICSCKDYW 684
Score = 165 bits (418), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 102/350 (29%), Positives = 176/350 (50%), Gaps = 3/350 (0%)
Query: 52 GKVCHAKII-GMGLNNDTLTSNILINFYSKCGLISGARKVFDEMPQRCIVSWNTIIGSYT 110
G+V HA+I+ + +N LIN YSK AR V P R +VSW ++I
Sbjct: 25 GRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISGLA 84
Query: 111 TNGREQEAVALFINMLREGKTPYSEFTVSSVLCACAAKRDVFECKQLHVFALKAAMDRNV 170
NG A+ F M REG P ++FT A A+ R KQ+H A+K +V
Sbjct: 85 QNGHFSTALVEFFEMRREGVVP-NDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDV 143
Query: 171 FVGTALLDVYAKCGLISDASRVFESMPERNEVTWSSMVAGFVQNELYEEALILFRRAQVL 230
FVG + D+Y K L DA ++F+ +PERN TW++ ++ V + EA+ F + +
Sbjct: 144 FVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRI 203
Query: 231 GLEYNQFTISSVICACAGLAALIQGKQVHAVLCKTGFGSNMFAASSLVDMYAKCGCVVDA 290
N T + + AC+ L G Q+H ++ ++GF +++ + L+D Y KC + +
Sbjct: 204 DGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSS 263
Query: 291 YFVFSGIEEKNVVLWNTMISGFSRHARSVEVMILFEKMQQAGLHPNEQTYISVLSACSHI 350
+F+ + KN V W ++++ + ++ + +L+ + ++ + ++ SVLSAC+ +
Sbjct: 264 EIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGM 323
Query: 351 GMVEKGKSYFDLMVKQHNVLPNVFHYSCMIDILGRAGLIHEAYDLILNMP 400
+E G+S VK V +F S ++D+ G+ G I ++ MP
Sbjct: 324 AGLELGRSIHAHAVKA-CVERTIFVGSALVDMYGKCGCIEDSEQAFDEMP 372
>sp|Q7Y211|PP285_ARATH Pentatricopeptide repeat-containing protein At3g57430,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2
SV=2
Length = 890
Score = 444 bits (1142), Expect = e-124, Method: Compositional matrix adjust.
Identities = 228/587 (38%), Positives = 345/587 (58%), Gaps = 21/587 (3%)
Query: 35 TLQATLQSCARERAPVRGKVCHAKIIGMG-LNNDTLTSNILINFYSKCGLISGARKVFDE 93
T+ + L +C+ GK HA + G L+ ++ + L++ Y C + R+VFD
Sbjct: 304 TISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDG 363
Query: 94 MPQRCIVSWNTIIGSYTTNGREQEAVALFINMLREGKTPYSEFTVSSVLCACAAKRDVFE 153
M R I WN +I Y+ N ++EA+ LFI M + T++ V+ AC
Sbjct: 364 MFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSR 423
Query: 154 CKQLHVFALKAAMDRNVFVGTALLDVYAKCGLISDASRVFESMPERNEVTWSSMVAGFVQ 213
+ +H F +K +DR+ FV L+D+Y++ G I A R+F M +R+ VTW++M+ G+V
Sbjct: 424 KEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVF 483
Query: 214 NELYEEALILFRRAQVL-----------GLEYNQFTISSVICACAGLAALIQGKQVHAVL 262
+E +E+AL+L + Q L L+ N T+ +++ +CA L+AL +GK++HA
Sbjct: 484 SEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYA 543
Query: 263 CKTGFGSNMFAASSLVDMYAKCGCVVDAYFVFSGIEEKNVVLWNTMISGFSRHARSVEVM 322
K +++ S+LVDMYAKCGC+ + VF I +KNV+ WN +I + H E +
Sbjct: 544 IKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAI 603
Query: 323 ILFEKMQQAGLHPNEQTYISVLSACSHIGMVEKGKSYFDLMVKQHNVLPNVFHYSCMIDI 382
L M G+ PNE T+ISV +ACSH GMV++G F +M + V P+ HY+C++D+
Sbjct: 604 DLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDL 663
Query: 383 LGRAGLIHEAYDLILNMPFD-ATASMWGSLLASCRNYRNLELAEIAAKQLFGMEPDNAGN 441
LGRAG I EAY L+ MP D A W SLL + R + NLE+ EIAA+ L +EP+ A +
Sbjct: 664 LGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASH 723
Query: 442 HLLLSNIYAANRRWEEVARARKLIRDSEVKKEKSKSWVE--------IKGKRNHPRIAEI 493
++LL+NIY++ W++ R+ +++ V+KE SW+E + G +HP+ ++
Sbjct: 724 YVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKL 783
Query: 494 YSKLEKLVEEMKKLGYKPETEHDLHDVEDSRKQELLIHHSEKLALTFGLMCLCPGVPIRI 553
LE L E M+K GY P+T LH+VE+ K+ LL HSEKLA+ FG++ PG IR+
Sbjct: 784 SGYLETLWERMRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRV 843
Query: 554 MKNLRICGDCHSFMKFASRIAGRETIVRDLNRFHHFTNGSCSCWDFW 600
KNLR+C DCH KF S+I RE I+RD+ RFH F NG+CSC D+W
Sbjct: 844 AKNLRVCNDCHLATKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 890
Score = 187 bits (475), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 125/382 (32%), Positives = 200/382 (52%), Gaps = 10/382 (2%)
Query: 38 ATLQSCARERAPVRGKVCHAKIIGMGLNNDTLT-SNILINFYSKCGLISGARKVFDEMPQ 96
A L++ A + GK HA + G D++T +N L+N Y KCG KVFD + +
Sbjct: 102 ALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISE 161
Query: 97 RCIVSWNTIIGSYTTNGREQEAVALFINMLREGKTPYSEFTVSSVLCACA---AKRDVFE 153
R VSWN++I S + + + A+ F ML E P S FT+ SV+ AC+ +
Sbjct: 162 RNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEP-SSFTLVSVVTACSNLPMPEGLMM 220
Query: 154 CKQLHVFALKAAMDRNVFVGTALLDVYAKCGLISDASRVFESMPERNEVTWSSMVAGFVQ 213
KQ+H + L+ + N F+ L+ +Y K G ++ + + S R+ VTW+++++ Q
Sbjct: 221 GKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQ 279
Query: 214 NELYEEALILFRRAQVLGLEYNQFTISSVICACAGLAALIQGKQVHAVLCKTG-FGSNMF 272
NE EAL R + G+E ++FTISSV+ AC+ L L GK++HA K G N F
Sbjct: 280 NEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSF 339
Query: 273 AASSLVDMYAKCGCVVDAYFVFSGIEEKNVVLWNTMISGFSRHARSVEVMILFEKMQQ-A 331
S+LVDMY C V+ VF G+ ++ + LWN MI+G+S++ E ++LF M++ A
Sbjct: 340 VGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESA 399
Query: 332 GLHPNEQTYISVLSACSHIGMVEKGKSYFDLMVKQHNVLPNVFHYSCMIDILGRAGLIHE 391
GL N T V+ AC G + ++ +VK+ + + F + ++D+ R G I
Sbjct: 400 GLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKR-GLDRDRFVQNTLMDMYSRLGKIDI 458
Query: 392 AYDLILNMPFDATASMWGSLLA 413
A + M D W +++
Sbjct: 459 AMRIFGKME-DRDLVTWNTMIT 479
Score = 137 bits (346), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 84/283 (29%), Positives = 155/283 (54%), Gaps = 20/283 (7%)
Query: 23 SASANANATELSTLQATLQSCARERAPVRGKVCHAKIIGMGLNNDTLTSNILINFYSKCG 82
SA AN+T T+ + +C R A R + H ++ GL+ D N L++ YS+ G
Sbjct: 398 SAGLLANST---TMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLG 454
Query: 83 LISGARKVFDEMPQRCIVSWNTIIGSYTTNGREQEAVALFINM------LREGKTPYS-- 134
I A ++F +M R +V+WNT+I Y + ++A+ L M + +G + S
Sbjct: 455 KIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLK 514
Query: 135 --EFTVSSVLCACAAKRDVFECKQLHVFALKAAMDRNVFVGTALLDVYAKCGLISDASRV 192
T+ ++L +CAA + + K++H +A+K + +V VG+AL+D+YAKCG + + +V
Sbjct: 515 PNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKV 574
Query: 193 FESMPERNEVTWSSMVAGFVQNELYEEALILFRRAQVLGLEYNQFTISSVICACAGLAAL 252
F+ +P++N +TW+ ++ + + +EA+ L R V G++ N+ T SV AC+ +
Sbjct: 575 FDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMV 634
Query: 253 IQGKQVHAVLCKTGFG----SNMFAASSLVDMYAKCGCVVDAY 291
+G ++ V+ K +G S+ +A +VD+ + G + +AY
Sbjct: 635 DEGLRIFYVM-KPDYGVEPSSDHYAC--VVDLLGRAGRIKEAY 674
Score = 93.6 bits (231), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 132/258 (51%), Gaps = 10/258 (3%)
Query: 186 ISDASRVFESMPERNEVTWSSMVAGFVQNELYEEALILFRRAQVLGLEYNQFTISSVICA 245
+S A +F S R+ W ++ V++ L EA++ + VLG++ + + +++ A
Sbjct: 48 VSGAPSIFISQ-SRSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKA 106
Query: 246 CAGLAALIQGKQVHAVLCKTGFG-SNMFAASSLVDMYAKCGCVVDAYFVFSGIEEKNVVL 304
A L + GKQ+HA + K G+G ++ A++LV++Y KCG Y VF I E+N V
Sbjct: 107 VADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVS 166
Query: 305 WNTMISGFSRHARSVEVMILFEKMQQAGLHPNEQTYISVLSACSHIGMVEK---GKSYFD 361
WN++IS + + F M + P+ T +SV++ACS++ M E GK
Sbjct: 167 WNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHA 226
Query: 362 LMVKQHNVLPNVFHYSCMIDILGRAGLIHEAYDLILNMPFDATASMWGSLLAS-CRNYRN 420
+++ + N F + ++ + G+ G + + ++L W ++L+S C+N +
Sbjct: 227 YGLRKGEL--NSFIINTLVAMYGKLGKLASS-KVLLGSFGGRDLVTWNTVLSSLCQNEQL 283
Query: 421 LELAEIAAKQLF-GMEPD 437
LE E + + G+EPD
Sbjct: 284 LEALEYLREMVLEGVEPD 301
>sp|Q9LIC3|PP227_ARATH Putative pentatricopeptide repeat-containing protein At3g13770,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H85 PE=3
SV=1
Length = 628
Score = 444 bits (1142), Expect = e-123, Method: Compositional matrix adjust.
Identities = 226/574 (39%), Positives = 346/574 (60%), Gaps = 11/574 (1%)
Query: 37 QATLQSCARERAPVRGKVCHAKIIGMGLNNDTLTSNILINFYSKCGLISGARKVFDEMPQ 96
A L +C +RA G+ HA +I T L+ FY KC + ARKV DEMP+
Sbjct: 56 DALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPE 115
Query: 97 RCIVSWNTIIGSYTTNGREQEAVALFINMLREGKTPYSEFTVSSVLCACAAKRDVFECKQ 156
+ +VSW +I Y+ G EA+ +F M+R P +EFT ++VL +C + KQ
Sbjct: 116 KNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKP-NEFTFATVLTSCIRASGLGLGKQ 174
Query: 157 LHVFALKAAMDRNVFVGTALLDVYAKCGLISDASRVFESMPERNEVTWSSMVAGFVQNEL 216
+H +K D ++FVG++LLD+YAK G I +A +FE +PER+ V+ ++++AG+ Q L
Sbjct: 175 IHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGL 234
Query: 217 YEEALILFRRAQVLGLEYNQFTISSVICACAGLAALIQGKQVHAVLCKTGFGSNMFAASS 276
EEAL +F R G+ N T +S++ A +GLA L GKQ H + + +S
Sbjct: 235 DEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNS 294
Query: 277 LVDMYAKCGCVVDAYFVFSGIEEKNVVLWNTMISGFSRHARSVEVMILFEKMQ-QAGLHP 335
L+DMY+KCG + A +F + E+ + WN M+ G+S+H EV+ LF M+ + + P
Sbjct: 295 LIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKP 354
Query: 336 NEQTYISVLSACSHIGMVEKGKSYFDLMVK-QHNVLPNVFHYSCMIDILGRAGLIHEAYD 394
+ T ++VLS CSH M + G + FD MV ++ P HY C++D+LGRAG I EA++
Sbjct: 355 DAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFE 414
Query: 395 LILNMPFDATASMWGSLLASCRNYRNLELAEIAAKQLFGMEPDNAGNHLLLSNIYAANRR 454
I MP TA + GSLL +CR + ++++ E ++L +EP+NAGN+++LSN+YA+ R
Sbjct: 415 FIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYASAGR 474
Query: 455 WEEVARARKLIRDSEVKKEKSKSWVEIK--------GKRNHPRIAEIYSKLEKLVEEMKK 506
W +V R ++ V KE +SW++ + R HPR E+ +K++++ +MK+
Sbjct: 475 WADVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEISIKMKQ 534
Query: 507 LGYKPETEHDLHDVEDSRKQELLIHHSEKLALTFGLMCLCPGVPIRIMKNLRICGDCHSF 566
GY P+ L+DV++ +K+++L+ HSEKLALTFGL+ G+PIR+ KNLRIC DCH+F
Sbjct: 535 AGYVPDLSCVLYDVDEEQKEKMLLGHSEKLALTFGLIATGEGIPIRVFKNLRICVDCHNF 594
Query: 567 MKFASRIAGRETIVRDLNRFHHFTNGSCSCWDFW 600
K S++ RE +RD NRFH +G CSC D+W
Sbjct: 595 AKIFSKVFEREVSLRDKNRFHQIVDGICSCGDYW 628
Score = 97.8 bits (242), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 105/210 (50%), Gaps = 4/210 (1%)
Query: 191 RVFESMPERNEVTWSSMVAGFVQNELYEEALILFRRAQVLGLEYNQFTISSVICACAGLA 250
R F S P + ++ N +EAL+ +LG E +++ AC
Sbjct: 10 RSFSSSPTNYVLQTILPISQLCSNGRLQEALL---EMAMLGPEMGFHGYDALLNACLDKR 66
Query: 251 ALIQGKQVHAVLCKTGFGSNMFAASSLVDMYAKCGCVVDAYFVFSGIEEKNVVLWNTMIS 310
AL G++VHA + KT + + + L+ Y KC C+ DA V + EKNVV W MIS
Sbjct: 67 ALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMIS 126
Query: 311 GFSRHARSVEVMILFEKMQQAGLHPNEQTYISVLSACSHIGMVEKGKSYFDLMVKQHNVL 370
+S+ S E + +F +M ++ PNE T+ +VL++C + GK L+VK N
Sbjct: 127 RYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKW-NYD 185
Query: 371 PNVFHYSCMIDILGRAGLIHEAYDLILNMP 400
++F S ++D+ +AG I EA ++ +P
Sbjct: 186 SHIFVGSSLLDMYAKAGQIKEAREIFECLP 215
>sp|Q9LTF4|PP429_ARATH Putative pentatricopeptide repeat-containing protein At5g52630
OS=Arabidopsis thaliana GN=PCMP-H52 PE=3 SV=1
Length = 588
Score = 444 bits (1142), Expect = e-123, Method: Compositional matrix adjust.
Identities = 239/570 (41%), Positives = 357/570 (62%), Gaps = 12/570 (2%)
Query: 40 LQSCARERAPVRGKVCHAKIIGMGLNNDTLTSNILINFYSKCGLISGARKVFDEMPQRCI 99
L S AR R+ ++G H ++ GL+ L +N LINFYSK L +R+ F++ PQ+
Sbjct: 22 LLSSARTRSTIKGLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKSS 81
Query: 100 VSWNTIIGSYTTNGREQEAVALFINMLREGKTPYSEFTVSSVL-CACAAKRDVFECKQLH 158
+W++II + N ++ M+ P S+ CA ++ D+ + +H
Sbjct: 82 TTWSSIISCFAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDI--GRSVH 139
Query: 159 VFALKAAMDRNVFVGTALLDVYAKCGLISDASRVFESMPERNEVTWSSMVAGFVQNELYE 218
++K D +VFVG++L+D+YAKCG I A ++F+ MP+RN VTWS M+ G+ Q E
Sbjct: 140 CLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENE 199
Query: 219 EALILFRRAQVLGLEYNQFTISSVICACAGLAALIQGKQVHAVLCKTGFGSNMFAASSLV 278
EAL LF+ A L N ++ SSVI CA L G+Q+H + K+ F S+ F SSLV
Sbjct: 200 EALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLV 259
Query: 279 DMYAKCGCVVDAYFVFSGIEEKNVVLWNTMISGFSRHARSVEVMILFEKMQQAGLHPNEQ 338
+Y+KCG AY VF+ + KN+ +WN M+ +++H+ + +V+ LF++M+ +G+ PN
Sbjct: 260 SLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFI 319
Query: 339 TYISVLSACSHIGMVEKGKSYFDLMVKQHNVLPNVFHYSCMIDILGRAGLIHEAYDLILN 398
T+++VL+ACSH G+V++G+ YFD M K+ + P HY+ ++D+LGRAG + EA ++I N
Sbjct: 320 TFLNVLNACSHAGLVDEGRYYFDQM-KESRIEPTDKHYASLVDMLGRAGRLQEALEVITN 378
Query: 399 MPFDATASMWGSLLASCRNYRNLELAEIAAKQLFGMEPDNAGNHLLLSNIYAANRRWEEV 458
MP D T S+WG+LL SC ++N ELA AA ++F + P ++G H+ LSN YAA+ R+E+
Sbjct: 379 MPIDPTESVWGALLTSCTVHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGRFEDA 438
Query: 459 ARARKLIRDSEVKKEKSKSWVEIK--------GKRNHPRIAEIYSKLEKLVEEMKKLGYK 510
A+ARKL+RD KKE SWVE + G+R H + EIY KL +L EEM+K GY
Sbjct: 439 AKARKLLRDRGEKKETGLSWVEERNKVHTFAAGERRHEKSKEIYEKLAELGEEMEKAGYI 498
Query: 511 PETEHDLHDVEDSRKQELLIHHSEKLALTFGLMCLCPGVPIRIMKNLRICGDCHSFMKFA 570
+T + L +V+ K + + +HSE+LA+ FGL+ PIR+MKNLR+CGDCH+ +KF
Sbjct: 499 ADTSYVLREVDGDEKNQTIRYHSERLAIAFGLITFPADRPIRVMKNLRVCGDCHNAIKFM 558
Query: 571 SRIAGRETIVRDLNRFHHFTNGSCSCWDFW 600
S R IVRD NRFH F +G CSC D+W
Sbjct: 559 SVCTRRVIIVRDNNRFHRFEDGKCSCNDYW 588
Score = 122 bits (305), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 161/302 (53%), Gaps = 4/302 (1%)
Query: 138 VSSVLCACAAKRDVFECKQLHVFALKAAMDRNVFVGTALLDVYAKCGLISDASRVFESMP 197
+ +L + A R + QLH + +K+ + V L++ Y+K L D+ R FE P
Sbjct: 18 ICDLLLSSARTRSTIKGLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSP 77
Query: 198 ERNEVTWSSMVAGFVQNELYEEALILFRRAQVLGLEYNQFTISSVICACAGLAALIQGKQ 257
+++ TWSS+++ F QNEL +L ++ L + + S +CA L+ G+
Sbjct: 78 QKSSTTWSSIISCFAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRS 137
Query: 258 VHAVLCKTGFGSNMFAASSLVDMYAKCGCVVDAYFVFSGIEEKNVVLWNTMISGFSRHAR 317
VH + KTG+ +++F SSLVDMYAKCG +V A +F + ++NVV W+ M+ G+++
Sbjct: 138 VHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGE 197
Query: 318 SVEVMILFEKMQQAGLHPNEQTYISVLSACSHIGMVEKGKSYFDLMVKQHNVLPNVFHYS 377
+ E + LF++ L N+ ++ SV+S C++ ++E G+ L +K + F S
Sbjct: 198 NEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDS-SSFVGS 256
Query: 378 CMIDILGRAGLIHEAYDLILNMPFDATASMWGSLL-ASCRNYRNLELAEIAAK-QLFGME 435
++ + + G+ AY + +P +W ++L A ++ ++ E+ + +L GM+
Sbjct: 257 SLVSLYSKCGVPEGAYQVFNEVPV-KNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMK 315
Query: 436 PD 437
P+
Sbjct: 316 PN 317
Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 78/164 (47%), Gaps = 6/164 (3%)
Query: 234 YNQFTISSVICACAGLAALIQGKQVHAVLCKTGFGSNMFAASSLVDMYAKCGCVVDAYFV 293
YNQ I ++ + A + I+G Q+H + K+G A++L++ Y+K D+
Sbjct: 15 YNQ--ICDLLLSSARTRSTIKGLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRA 72
Query: 294 FSGIEEKNVVLWNTMISGFSRHARSVEVMILFEKMQQAGLHPNEQTYISVLSACSHIGMV 353
F +K+ W+++IS F+++ + +KM L P++ S +C+ +
Sbjct: 73 FEDSPQKSSTTWSSIISCFAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRC 132
Query: 354 EKGKSYFDLMVKQHNVLPNVFHYSCMIDILGRAGLI---HEAYD 394
+ G+S L +K +VF S ++D+ + G I + +D
Sbjct: 133 DIGRSVHCLSMKT-GYDADVFVGSSLVDMYAKCGEIVYARKMFD 175
>sp|Q9SHZ8|PP168_ARATH Pentatricopeptide repeat-containing protein At2g22070
OS=Arabidopsis thaliana GN=PCMP-H41 PE=3 SV=1
Length = 786
Score = 440 bits (1132), Expect = e-122, Method: Compositional matrix adjust.
Identities = 233/639 (36%), Positives = 357/639 (55%), Gaps = 73/639 (11%)
Query: 35 TLQATLQSCARERAPVRGKVCHAKIIGMGLNNDTLTSNILINFYSKCGLISGARKVFD-- 92
TL L S A R GK H+ I+ +GL + SN L+N Y+KCG A+ VFD
Sbjct: 148 TLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRM 207
Query: 93 -----------------------------EMPQRCIVSWNTIIGSYTTNGREQEAVALFI 123
+M +R IV+WN++I + G + A+ +F
Sbjct: 208 VVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFS 267
Query: 124 NMLREGKTPYSEFTVSSVLCACAAKRDVFECKQLHVFALKAAMDRNVFVGTALLDVYAKC 183
MLR+ FT++SVL ACA + KQ+H + D + V AL+ +Y++C
Sbjct: 268 KMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRC 327
Query: 184 GLISDASR---------------------------------VFESMPERNEVTWSSMVAG 210
G + A R +F S+ +R+ V W++M+ G
Sbjct: 328 GGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVG 387
Query: 211 FVQNELYEEALILFRRAQVLGLEYNQFTISSVICACAGLAALIQGKQVHAVLCKTGFGSN 270
+ Q+ Y EA+ LFR G N +T+++++ + LA+L GKQ+H K+G +
Sbjct: 388 YEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYS 447
Query: 271 MFAASSLVDMYAKCGCVVDAYFVFSGIE-EKNVVLWNTMISGFSRHARSVEVMILFEKMQ 329
+ +++L+ MYAK G + A F I E++ V W +MI ++H + E + LFE M
Sbjct: 448 VSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETML 507
Query: 330 QAGLHPNEQTYISVLSACSHIGMVEKGKSYFDLMVKQHNVLPNVFHYSCMIDILGRAGLI 389
GL P+ TY+ V SAC+H G+V +G+ YFD+M ++P + HY+CM+D+ GRAGL+
Sbjct: 508 MEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLL 567
Query: 390 HEAYDLILNMPFDATASMWGSLLASCRNYRNLELAEIAAKQLFGMEPDNAGNHLLLSNIY 449
EA + I MP + WGSLL++CR ++N++L ++AA++L +EP+N+G + L+N+Y
Sbjct: 568 QEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLY 627
Query: 450 AANRRWEEVARARKLIRDSEVKKEKSKSWVEIKGK--------RNHPRIAEIYSKLEKLV 501
+A +WEE A+ RK ++D VKKE+ SW+E+K K HP EIY ++K+
Sbjct: 628 SACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIW 687
Query: 502 EEMKKLGYKPETEHDLHDVEDSRKQELLIHHSEKLALTFGLMCLCPGVPIRIMKNLRICG 561
+E+KK+GY P+T LHD+E+ K+++L HHSEKLA+ FGL+ +RIMKNLR+C
Sbjct: 688 DEIKKMGYVPDTASVLHDLEEEVKEQILRHHSEKLAIAFGLISTPDKTTLRIMKNLRVCN 747
Query: 562 DCHSFMKFASRIAGRETIVRDLNRFHHFTNGSCSCWDFW 600
DCH+ +KF S++ GRE IVRD RFHHF +G CSC D+W
Sbjct: 748 DCHTAIKFISKLVGREIIVRDTTRFHHFKDGFCSCRDYW 786
Score = 162 bits (410), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 139/512 (27%), Positives = 228/512 (44%), Gaps = 110/512 (21%)
Query: 41 QSCARERAPVRGKVCHAKIIGMGLNNDTLTSNILINFYSKCGLISGARKVFDEMPQRCIV 100
+S + ++ H ++I GL N L+N YSK G ARK+FDEMP R
Sbjct: 22 KSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAF 81
Query: 101 SWNTIIGSYTTNG-------------------------------REQEAVALFINMLREG 129
SWNT++ +Y+ G + +A+ + +M++EG
Sbjct: 82 SWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEG 141
Query: 130 KTPYSEFTVSSVLCACAAKRDVFECKQLHVFALKAAMDRNVFVGTALLDVYAKCG----- 184
P ++FT+++VL + AA R + K++H F +K + NV V +LL++YAKCG
Sbjct: 142 IEP-TQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMA 200
Query: 185 -------LISDASR-------------------VFESMPERNEVTWSSMVAGFVQNELYE 218
++ D S FE M ER+ VTW+SM++GF Q
Sbjct: 201 KFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDL 260
Query: 219 EALILFRRA-QVLGLEYNQFTISSVICACAGLAALIQGKQVHAVLCKTGFGSNMFAASSL 277
AL +F + + L ++FT++SV+ ACA L L GKQ+H+ + TGF + ++L
Sbjct: 261 RALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNAL 320
Query: 278 VDMYAKCGCV-----------------------VDAYF----------VFSGIEEKNVVL 304
+ MY++CG V +D Y +F +++++VV
Sbjct: 321 ISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVA 380
Query: 305 WNTMISGFSRHARSVEVMILFEKMQQAGLHPNEQTYISVLSACSHIGMVEKGKSYFDLMV 364
W MI G+ +H E + LF M G PN T ++LS S + + GK V
Sbjct: 381 WTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAV 440
Query: 365 KQHNVLPNVFHYSCMIDILGRAGLI---HEAYDLILNMPFDATASMWGSLLASCRNYRNL 421
K + +V + +I + +AG I A+DLI + W S++ + + +
Sbjct: 441 KSGEIY-SVSVSNALITMYAKAGNITSASRAFDLI---RCERDTVSWTSMIIALAQHGHA 496
Query: 422 ELA-EIAAKQLF-GMEPDNAGNHLLLSNIYAA 451
E A E+ L G+ PD H+ +++A
Sbjct: 497 EEALELFETMLMEGLRPD----HITYVGVFSA 524
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 439 bits (1129), Expect = e-122, Method: Compositional matrix adjust.
Identities = 224/582 (38%), Positives = 352/582 (60%), Gaps = 18/582 (3%)
Query: 32 ELSTLQATLQSCARERAPVRGKVCHAKIIGMGLNNDTLTSNILINFYSKCGLISGARKVF 91
+L+T+ + CA R G+ H+ + + + N L++ YSKCG + A+ VF
Sbjct: 295 DLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVF 354
Query: 92 DEMPQRCIVSWNTIIGSYTTNGREQEAVALFINMLREGKTPYSEFTVSSVLCACAAKRDV 151
EM R +VS+ ++I Y G EAV LF M EG +P +TV++VL CA R +
Sbjct: 355 REMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISP-DVYTVTAVLNCCARYRLL 413
Query: 152 FECKQLHVFALKAAMDRNVFVGTALLDVYAKCGLISDASRVFESMPERNEVTWSSMVAGF 211
E K++H + + + ++FV AL+D+YAKCG + +A VF M ++ ++W++++ G+
Sbjct: 414 DEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGY 473
Query: 212 VQNELYEEALILFRRAQVLGLEYNQF-----TISSVICACAGLAALIQGKQVHAVLCKTG 266
+N EAL LF L LE +F T++ V+ ACA L+A +G+++H + + G
Sbjct: 474 SKNCYANEALSLFN----LLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNG 529
Query: 267 FGSNMFAASSLVDMYAKCGCVVDAYFVFSGIEEKNVVLWNTMISGFSRHARSVEVMILFE 326
+ S+ A+SLVDMYAKCG ++ A+ +F I K++V W MI+G+ H E + LF
Sbjct: 530 YFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFN 589
Query: 327 KMQQAGLHPNEQTYISVLSACSHIGMVEKGKSYFDLMVKQHNVLPNVFHYSCMIDILGRA 386
+M+QAG+ +E +++S+L ACSH G+V++G +F++M + + P V HY+C++D+L R
Sbjct: 590 QMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLART 649
Query: 387 GLIHEAYDLILNMPFDATASMWGSLLASCRNYRNLELAEIAAKQLFGMEPDNAGNHLLLS 446
G + +AY I NMP A++WG+LL CR + +++LAE A+++F +EP+N G ++L++
Sbjct: 650 GDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMA 709
Query: 447 NIYAANRRWEEVARARKLIRDSEVKKEKSKSWVEIKGKRN--------HPRIAEIYSKLE 498
NIYA +WE+V R RK I ++K SW+EIKG+ N +P I + L
Sbjct: 710 NIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLR 769
Query: 499 KLVEEMKKLGYKPETEHDLHDVEDSRKQELLIHHSEKLALTFGLMCLCPGVPIRIMKNLR 558
K+ M + GY P T++ L D E+ K+E L HSEKLA+ G++ G IR+ KNLR
Sbjct: 770 KVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMALGIISSGHGKIIRVTKNLR 829
Query: 559 ICGDCHSFMKFASRIAGRETIVRDLNRFHHFTNGSCSCWDFW 600
+CGDCH KF S++ RE ++RD NRFH F +G CSC FW
Sbjct: 830 VCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRGFW 871
Score = 179 bits (453), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 108/358 (30%), Positives = 193/358 (53%), Gaps = 2/358 (0%)
Query: 35 TLQATLQSCARERAPVRGKVCHAKIIGMGLNNDTLTSNILINFYSKCGLISGARKVFDEM 94
TL + LQ CA ++ GK I G G D+ + L Y+ CG + A +VFDE+
Sbjct: 96 TLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEV 155
Query: 95 PQRCIVSWNTIIGSYTTNGREQEAVALFINMLREGKTPYSEFTVSSVLCACAAKRDVFEC 154
+ WN ++ +G ++ LF M+ G +T S V + ++ R V
Sbjct: 156 KIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSG-VEMDSYTFSCVSKSFSSLRSVHGG 214
Query: 155 KQLHVFALKAAMDRNVFVGTALLDVYAKCGLISDASRVFESMPERNEVTWSSMVAGFVQN 214
+QLH F LK+ VG +L+ Y K + A +VF+ M ER+ ++W+S++ G+V N
Sbjct: 215 EQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSN 274
Query: 215 ELYEEALILFRRAQVLGLEYNQFTISSVICACAGLAALIQGKQVHAVLCKTGFGSNMFAA 274
L E+ L +F + V G+E + TI SV CA + G+ VH++ K F
Sbjct: 275 GLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFC 334
Query: 275 SSLVDMYAKCGCVVDAYFVFSGIEEKNVVLWNTMISGFSRHARSVEVMILFEKMQQAGLH 334
++L+DMY+KCG + A VF + +++VV + +MI+G++R + E + LFE+M++ G+
Sbjct: 335 NTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGIS 394
Query: 335 PNEQTYISVLSACSHIGMVEKGKSYFDLMVKQHNVLPNVFHYSCMIDILGRAGLIHEA 392
P+ T +VL+ C+ ++++GK + +K++++ ++F + ++D+ + G + EA
Sbjct: 395 PDVYTVTAVLNCCARYRLLDEGKRVHE-WIKENDLGFDIFVSNALMDMYAKCGSMQEA 451
>sp|Q9LNU6|PPR53_ARATH Pentatricopeptide repeat-containing protein At1g20230
OS=Arabidopsis thaliana GN=PCMP-H21 PE=2 SV=2
Length = 760
Score = 439 bits (1129), Expect = e-122, Method: Compositional matrix adjust.
Identities = 236/644 (36%), Positives = 357/644 (55%), Gaps = 79/644 (12%)
Query: 35 TLQATLQSCARERAPVRGKVCHAKIIGMGLNNDTLTSNILINFYSKCGLISGARKVFDEM 94
L + CA A GK H GL+ D + + Y +CG + ARKVFD M
Sbjct: 118 VLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRM 177
Query: 95 PQR----------------C-------------------IVSWNTIIGSYTTNGREQEAV 119
+ C IVSWN I+ + +G +EAV
Sbjct: 178 SDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAV 237
Query: 120 ALFINMLREGKTPYSEFTVSSVLCACAAKRDVFECKQLHVFALKAAMDRNVFVGTALLDV 179
+F + G P + TVSSVL + + + +H + +K + ++ V +A++D+
Sbjct: 238 VMFQKIHHLGFCP-DQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDM 296
Query: 180 YAKCG-------------------------------LISDASRVFESMPER----NEVTW 204
Y K G L+ A +FE E+ N V+W
Sbjct: 297 YGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSW 356
Query: 205 SSMVAGFVQNELYEEALILFRRAQVLGLEYNQFTISSVICACAGLAALIQGKQVHAVLCK 264
+S++AG QN EAL LFR QV G++ N TI S++ AC +AAL G+ H +
Sbjct: 357 TSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVR 416
Query: 265 TGFGSNMFAASSLVDMYAKCGCVVDAYFVFSGIEEKNVVLWNTMISGFSRHARSVEVMIL 324
N+ S+L+DMYAKCG + + VF+ + KN+V WN++++GFS H ++ EVM +
Sbjct: 417 VHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSI 476
Query: 325 FEKMQQAGLHPNEQTYISVLSACSHIGMVEKGKSYFDLMVKQHNVLPNVFHYSCMIDILG 384
FE + + L P+ ++ S+LSAC +G+ ++G YF +M +++ + P + HYSCM+++LG
Sbjct: 477 FESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLG 536
Query: 385 RAGLIHEAYDLILNMPFDATASMWGSLLASCRNYRNLELAEIAAKQLFGMEPDNAGNHLL 444
RAG + EAYDLI MPF+ + +WG+LL SCR N++LAEIAA++LF +EP+N G ++L
Sbjct: 537 RAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVL 596
Query: 445 LSNIYAANRRWEEVARARKLIRDSEVKKEKSKSWVEIK--------GKRNHPRIAEIYSK 496
LSNIYAA W EV R + +KK SW+++K G ++HP+I +I K
Sbjct: 597 LSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQITEK 656
Query: 497 LEKLVEEMKKLGYKPETEHDLHDVEDSRKQELLIHHSEKLALTFGLMCLCPGVPIRIMKN 556
++++ +EM+K G++P + LHDVE+ ++++L HSEKLA+ FGL+ G P++++KN
Sbjct: 657 MDEISKEMRKSGHRPNLDFALHDVEEQEQEQMLWGHSEKLAVVFGLLNTPDGTPLQVIKN 716
Query: 557 LRICGDCHSFMKFASRIAGRETIVRDLNRFHHFTNGSCSCWDFW 600
LRICGDCH+ +KF S AGRE +RD NRFHHF +G CSC DFW
Sbjct: 717 LRICGDCHAVIKFISSYAGREIFIRDTNRFHHFKDGICSCGDFW 760
Score = 147 bits (370), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 107/427 (25%), Positives = 189/427 (44%), Gaps = 73/427 (17%)
Query: 56 HAKIIGMGLNNDTLTSNILINFYSKCGLISGARKVFDEMPQRCIVSWNTIIGSYTTNGRE 115
HA+I+ G ND S LI YS + A V +P I S++++I + T
Sbjct: 38 HARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLF 97
Query: 116 QEAVALFINMLREGKTPYSEFTVSSVLCACAAKRDVFECKQLHVFALKAAMDRNVFVGTA 175
+++ +F M G P S + ++ CA KQ+H + + +D + FV +
Sbjct: 98 TQSIGVFSRMFSHGLIPDSH-VLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGS 156
Query: 176 LLDVYAKCGLISDASRVFESMPERNEVT-------------------------------- 203
+ +Y +CG + DA +VF+ M +++ VT
Sbjct: 157 MFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEAN 216
Query: 204 ---WSSMVAGFVQNELYEEALILFRRAQVLGLEYNQFTISSVICACAGLAALIQGKQVHA 260
W+ +++GF ++ ++EA+++F++ LG +Q T+SSV+ + L G+ +H
Sbjct: 217 IVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHG 276
Query: 261 VLCKTGFGSNMFAASSLVDMYAKCGCVVDAYFVFSGIE---------------------- 298
+ K G + S+++DMY K G V +F+ E
Sbjct: 277 YVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDK 336
Query: 299 -------------EKNVVLWNTMISGFSRHARSVEVMILFEKMQQAGLHPNEQTYISVLS 345
E NVV W ++I+G +++ + +E + LF +MQ AG+ PN T S+L
Sbjct: 337 ALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLP 396
Query: 346 ACSHIGMVEKGKSYFDLMVKQHNVLPNVFHYSCMIDILGRAGLIHEAYDLILNMPFDATA 405
AC +I + G+S V+ H +L NV S +ID+ + G I+ + ++ NM
Sbjct: 397 ACGNIAALGHGRSTHGFAVRVH-LLDNVHVGSALIDMYAKCGRINLS-QIVFNMMPTKNL 454
Query: 406 SMWGSLL 412
W SL+
Sbjct: 455 VCWNSLM 461
Score = 109 bits (273), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 86/368 (23%), Positives = 159/368 (43%), Gaps = 78/368 (21%)
Query: 156 QLHVFALKAAMDRNVFVGTALLDVYAKCGLISDASRVFESMPERNEVTWSSMVAGFVQNE 215
Q H LK+ + ++ L+ Y+ +DA V +S+P+ ++SS++ + +
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAK 95
Query: 216 LYEEALILFRRAQVLGLEYNQFTISSVICACAGLAALIQGKQVHAVLCKTGFGSNMFAAS 275
L+ +++ +F R GL + + ++ CA L+A GKQ+H V C +G + F
Sbjct: 96 LFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQG 155
Query: 276 SLVDMYAKCGCVVDAYFVF------------------------------------SGIEE 299
S+ MY +CG + DA VF SGI E
Sbjct: 156 SMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGI-E 214
Query: 300 KNVVLWNTMISGFSRHARSVEVMILFEKMQQAGLHPNEQTYISVLSACSHIGMVEKGKSY 359
N+V WN ++SGF+R E +++F+K+ G P++ T SVL + M+ G+
Sbjct: 215 ANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLI 274
Query: 360 FDLMVKQHNVLPNVFHYSCMIDILGRAGLIH----------------------------- 390
++KQ +L + S MID+ G++G ++
Sbjct: 275 HGYVIKQ-GLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGL 333
Query: 391 -----EAYDLILNMPFDATASMWGSLLASC-RNYRNLELAEIAAK-QLFGMEPDNAGNHL 443
E ++L + W S++A C +N +++E E+ + Q+ G++P NH+
Sbjct: 334 VDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKP----NHV 389
Query: 444 LLSNIYAA 451
+ ++ A
Sbjct: 390 TIPSMLPA 397
>sp|Q9ZUW3|PP172_ARATH Pentatricopeptide repeat-containing protein At2g27610
OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1
Length = 868
Score = 434 bits (1115), Expect = e-120, Method: Compositional matrix adjust.
Identities = 222/580 (38%), Positives = 355/580 (61%), Gaps = 20/580 (3%)
Query: 34 STLQATLQSCARERAPVRGKVCHAKIIGMGLNNDTLTSNILINFYSKCGLISGARKVFDE 93
S+ + ++ CA + + H ++ G D L+ YSKC + A ++F E
Sbjct: 296 SSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKE 355
Query: 94 MPQRCI---VSWNTIIGSYTTNGREQEAVALFINMLREGKTPYSEFTVSSVLCACAAKRD 150
+ C+ VSW +I + N ++EAV LF M R+G P +EFT S +L A
Sbjct: 356 IG--CVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRP-NEFTYSVILTALP---- 408
Query: 151 VFECKQLHVFALKAAMDRNVFVGTALLDVYAKCGLISDASRVFESMPERNEVTWSSMVAG 210
V ++H +K +R+ VGTALLD Y K G + +A++VF + +++ V WS+M+AG
Sbjct: 409 VISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAG 468
Query: 211 FVQNELYEEALILFRRAQVLGLEYNQFTISSVICACAGL-AALIQGKQVHAVLCKTGFGS 269
+ Q E A+ +F G++ N+FT SS++ CA A++ QGKQ H K+ S
Sbjct: 469 YAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDS 528
Query: 270 NMFAASSLVDMYAKCGCVVDAYFVFSGIEEKNVVLWNTMISGFSRHARSVEVMILFEKMQ 329
++ +S+L+ MYAK G + A VF EK++V WN+MISG+++H ++++ + +F++M+
Sbjct: 529 SLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMK 588
Query: 330 QAGLHPNEQTYISVLSACSHIGMVEKGKSYFDLMVKQHNVLPNVFHYSCMIDILGRAGLI 389
+ + + T+I V +AC+H G+VE+G+ YFD+MV+ + P H SCM+D+ RAG +
Sbjct: 589 KRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQL 648
Query: 390 HEAYDLILNMPFDATASMWGSLLASCRNYRNLELAEIAAKQLFGMEPDNAGNHLLLSNIY 449
+A +I NMP A +++W ++LA+CR ++ EL +AA+++ M+P+++ ++LLSN+Y
Sbjct: 649 EKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMY 708
Query: 450 AANRRWEEVARARKLIRDSEVKKEKSKSWVEIK--------GKRNHPRIAEIYSKLEKLV 501
A + W+E A+ RKL+ + VKKE SW+E+K G R+HP +IY KLE L
Sbjct: 709 AESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLEDLS 768
Query: 502 EEMKKLGYKPETEHDLHDVEDSRKQELLIHHSEKLALTFGLMCLCPGVPIRIMKNLRICG 561
+K LGY+P+T + L D++D K+ +L HSE+LA+ FGL+ G P+ I+KNLR+CG
Sbjct: 769 TRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIATPKGSPLLIIKNLRVCG 828
Query: 562 DCHSFMKFASRIAGRETIVRDLNRFHHF-TNGSCSCWDFW 600
DCH +K ++I RE +VRD NRFHHF ++G CSC DFW
Sbjct: 829 DCHLVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDFW 868
Score = 189 bits (479), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 109/333 (32%), Positives = 187/333 (56%), Gaps = 7/333 (2%)
Query: 35 TLQATLQSCARERAPVRGKVCHAKIIGMGLNNDTLTSNILINFYSKCGLISGARKVFDEM 94
T A L A E RG H ++ GL+ SN LIN Y KCG + AR +FD+
Sbjct: 196 TFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKT 255
Query: 95 PQRCIVSWNTIIGSYTTNGREQEAVALFINMLREGKTPYSEFTVSSVLCACAAKRDVFEC 154
+ +V+WN++I Y NG + EA+ +F +M R SE + +SV+ CA +++
Sbjct: 256 EVKSVVTWNSMISGYAANGLDLEALGMFYSM-RLNYVRLSESSFASVIKLCANLKELRFT 314
Query: 155 KQLHVFALKAAMDRNVFVGTALLDVYAKCGLISDASRVFESMP-ERNEVTWSSMVAGFVQ 213
+QLH +K + + TAL+ Y+KC + DA R+F+ + N V+W++M++GF+Q
Sbjct: 315 EQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQ 374
Query: 214 NELYEEALILFRRAQVLGLEYNQFTISSVICACAGLAALIQGKQVHAVLCKTGFGSNMFA 273
N+ EEA+ LF + G+ N+FT S ++ A +I +VHA + KT + +
Sbjct: 375 NDGKEEAVDLFSEMKRKGVRPNEFTYSVILTAL----PVISPSEVHAQVVKTNYERSSTV 430
Query: 274 ASSLVDMYAKCGCVVDAYFVFSGIEEKNVVLWNTMISGFSRHARSVEVMILFEKMQQAGL 333
++L+D Y K G V +A VFSGI++K++V W+ M++G+++ + + +F ++ + G+
Sbjct: 431 GTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGI 490
Query: 334 HPNEQTYISVLSACSHIGM-VEKGKSYFDLMVK 365
PNE T+ S+L+ C+ + +GK + +K
Sbjct: 491 KPNEFTFSSILNVCAATNASMGQGKQFHGFAIK 523
Score = 169 bits (429), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 116/383 (30%), Positives = 189/383 (49%), Gaps = 12/383 (3%)
Query: 52 GKVCHAKIIGMGLNNDTLTSNILINFYSKCGLISGARKVFDEMPQRCIVSWNTIIGSYTT 111
G+ H + I G +D L++ Y K RKVFDEM +R +V+W T+I Y
Sbjct: 112 GRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYAR 171
Query: 112 NGREQEAVALFINMLREGKTPYSEFTVSSVLCACAAKRDVFECKQLHVFALKAAMDRNVF 171
N E + LF+ M EG P S FT ++ L A + Q+H +K +D+ +
Sbjct: 172 NSMNDEVLTLFMRMQNEGTQPNS-FTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIP 230
Query: 172 VGTALLDVYAKCGLISDASRVFESMPERNEVTWSSMVAGFVQNELYEEALILFRRAQVLG 231
V +L+++Y KCG + A +F+ ++ VTW+SM++G+ N L EAL +F ++
Sbjct: 231 VSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNY 290
Query: 232 LEYNQFTISSVICACAGLAALIQGKQVHAVLCKTGFGSNMFAASSLVDMYAKCGCVVDAY 291
+ ++ + +SVI CA L L +Q+H + K GF + ++L+ Y+KC ++DA
Sbjct: 291 VRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDAL 350
Query: 292 FVFSGIE-EKNVVLWNTMISGFSRHARSVEVMILFEKMQQAGLHPNEQTYISVLSACSHI 350
+F I NVV W MISGF ++ E + LF +M++ G+ PNE TY +L+A I
Sbjct: 351 RLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVI 410
Query: 351 GMVEKGKSYFDLMVKQHNVLPNVFHYSCMIDILGRAGLIHEAYDLILNMPFDATASMWGS 410
E V + N + + ++D + G + EA + + D W +
Sbjct: 411 SPSE-----VHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGID-DKDIVAWSA 464
Query: 411 LLASCRNYRNLELAEIAAKQLFG 433
+LA E AA ++FG
Sbjct: 465 MLAGYAQTGETE----AAIKMFG 483
Score = 160 bits (404), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 92/265 (34%), Positives = 150/265 (56%), Gaps = 3/265 (1%)
Query: 87 ARKVFDEMPQRCIVSWNTIIGSYTTNGREQEAVALFINMLREG-KTPYSEFTVSSVLCAC 145
A +FD+ P R S+ +++ ++ +GR QEA LF+N+ R G + S F SSVL
Sbjct: 46 AHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIF--SSVLKVS 103
Query: 146 AAKRDVFECKQLHVFALKAAMDRNVFVGTALLDVYAKCGLISDASRVFESMPERNEVTWS 205
A D +QLH +K +V VGT+L+D Y K D +VF+ M ERN VTW+
Sbjct: 104 ATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWT 163
Query: 206 SMVAGFVQNELYEEALILFRRAQVLGLEYNQFTISSVICACAGLAALIQGKQVHAVLCKT 265
++++G+ +N + +E L LF R Q G + N FT ++ + A +G QVH V+ K
Sbjct: 164 TLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKN 223
Query: 266 GFGSNMFAASSLVDMYAKCGCVVDAYFVFSGIEEKNVVLWNTMISGFSRHARSVEVMILF 325
G + ++SL+++Y KCG V A +F E K+VV WN+MISG++ + +E + +F
Sbjct: 224 GLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMF 283
Query: 326 EKMQQAGLHPNEQTYISVLSACSHI 350
M+ + +E ++ SV+ C+++
Sbjct: 284 YSMRLNYVRLSESSFASVIKLCANL 308
Score = 103 bits (257), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 125/271 (46%), Gaps = 33/271 (12%)
Query: 188 DASRVFESMPERNEVTWSSMVAGFVQNELYEEALILFRRAQVLGLEYNQFTISSVICACA 247
+A +F+ P R+ ++ S++ GF ++ +EA LF LG+E + SSV+ A
Sbjct: 45 NAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSA 104
Query: 248 GLAALIQGKQVHAVLCKTGFGSNMFAASSLVDMYAKCGCVVDAYFVFSGIEEKNVVLWNT 307
L + G+Q+H K GF ++ +SLVD Y K D VF ++E+NVV W T
Sbjct: 105 TLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTT 164
Query: 308 MISGFSRHARSVEVMILFEKMQQAGLHPNEQTYISVLSACSHIGMVEKG--------KSY 359
+ISG++R++ + EV+ LF +MQ G PN T+ + L + G+ +G K+
Sbjct: 165 LISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNG 224
Query: 360 FDLMVKQHNVLPNVF----------------------HYSCMIDILGRAGLIHEAYDLIL 397
D + N L N++ ++ MI GL EA +
Sbjct: 225 LDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFY 284
Query: 398 NMPFD---ATASMWGSLLASCRNYRNLELAE 425
+M + + S + S++ C N + L E
Sbjct: 285 SMRLNYVRLSESSFASVIKLCANLKELRFTE 315
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 432 bits (1111), Expect = e-120, Method: Compositional matrix adjust.
Identities = 220/574 (38%), Positives = 346/574 (60%), Gaps = 10/574 (1%)
Query: 35 TLQATLQSCARERAPVRGKVCHAKIIGMGLNNDTLTSNILINFYSKCGLISGARKVFDEM 94
T+ + L + + R GK H + G ++ S L++ Y+KCG + AR++FD M
Sbjct: 238 TIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGM 297
Query: 95 PQRCIVSWNTIIGSYTTNGREQEAVALFINMLREGKTPYSEFTVSSVLCACAAKRDVFEC 154
+R +VSWN++I +Y N +EA+ +F ML EG P ++ +V L ACA D+
Sbjct: 298 LERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKP-TDVSVMGALHACADLGDLERG 356
Query: 155 KQLHVFALKAAMDRNVFVGTALLDVYAKCGLISDASRVFESMPERNEVTWSSMVAGFVQN 214
+ +H +++ +DRNV V +L+ +Y KC + A+ +F + R V+W++M+ GF QN
Sbjct: 357 RFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQN 416
Query: 215 ELYEEALILFRRAQVLGLEYNQFTISSVICACAGLAALIQGKQVHAVLCKTGFGSNMFAA 274
+AL F + + ++ + FT SVI A A L+ K +H V+ ++ N+F
Sbjct: 417 GRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVT 476
Query: 275 SSLVDMYAKCGCVVDAYFVFSGIEEKNVVLWNTMISGFSRHARSVEVMILFEKMQQAGLH 334
++LVDMYAKCG ++ A +F + E++V WN MI G+ H + LFE+MQ+ +
Sbjct: 477 TALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIK 536
Query: 335 PNEQTYISVLSACSHIGMVEKGKSYFDLMVKQHNVLPNVFHYSCMIDILGRAGLIHEAYD 394
PN T++SV+SACSH G+VE G F +M + +++ ++ HY M+D+LGRAG ++EA+D
Sbjct: 537 PNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWD 596
Query: 395 LILNMPFDATASMWGSLLASCRNYRNLELAEIAAKQLFGMEPDNAGNHLLLSNIYAANRR 454
I+ MP +++G++L +C+ ++N+ AE AA++LF + PD+ G H+LL+NIY A
Sbjct: 597 FIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASM 656
Query: 455 WEEVARARKLIRDSEVKKEKSKSWVEIK--------GKRNHPRIAEIYSKLEKLVEEMKK 506
WE+V + R + ++K S VEIK G HP +IY+ LEKL+ +K+
Sbjct: 657 WEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKE 716
Query: 507 LGYKPETEHDLHDVEDSRKQELLIHHSEKLALTFGLMCLCPGVPIRIMKNLRICGDCHSF 566
GY P+T L VE+ K++LL HSEKLA++FGL+ G I + KNLR+C DCH+
Sbjct: 717 AGYVPDTNLVL-GVENDVKEQLLSTHSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHNA 775
Query: 567 MKFASRIAGRETIVRDLNRFHHFTNGSCSCWDFW 600
K+ S + GRE +VRD+ RFHHF NG+CSC D+W
Sbjct: 776 TKYISLVTGREIVVRDMQRFHHFKNGACSCGDYW 809
Score = 222 bits (565), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 122/373 (32%), Positives = 212/373 (56%), Gaps = 3/373 (0%)
Query: 40 LQSCARERAPVRGKVCHAKIIGMGLNNDTLTSNILINFYSKCGLISGARKVFDEMPQRCI 99
L+ C E GK H ++ G + D L N Y+KC ++ ARKVFD MP+R +
Sbjct: 142 LKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDL 201
Query: 100 VSWNTIIGSYTTNGREQEAVALFINMLREGKTPYSEFTVSSVLCACAAKRDVFECKQLHV 159
VSWNTI+ Y+ NG + A+ + +M E P S T+ SVL A +A R + K++H
Sbjct: 202 VSWNTIVAGYSQNGMARMALEMVKSMCEENLKP-SFITIVSVLPAVSALRLISVGKEIHG 260
Query: 160 FALKAAMDRNVFVGTALLDVYAKCGLISDASRVFESMPERNEVTWSSMVAGFVQNELYEE 219
+A+++ D V + TAL+D+YAKCG + A ++F+ M ERN V+W+SM+ +VQNE +E
Sbjct: 261 YAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKE 320
Query: 220 ALILFRRAQVLGLEYNQFTISSVICACAGLAALIQGKQVHAVLCKTGFGSNMFAASSLVD 279
A+++F++ G++ ++ + ACA L L +G+ +H + + G N+ +SL+
Sbjct: 321 AMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLIS 380
Query: 280 MYAKCGCVVDAYFVFSGIEEKNVVLWNTMISGFSRHARSVEVMILFEKMQQAGLHPNEQT 339
MY KC V A +F ++ + +V WN MI GF+++ R ++ + F +M+ + P+ T
Sbjct: 381 MYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFT 440
Query: 340 YISVLSACSHIGMVEKGKSYFDLMVKQHNVLPNVFHYSCMIDILGRAGLIHEAYDLILNM 399
Y+SV++A + + + K + +V + + NVF + ++D+ + G I A LI +M
Sbjct: 441 YVSVITAIAELSITHHAK-WIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIA-RLIFDM 498
Query: 400 PFDATASMWGSLL 412
+ + W +++
Sbjct: 499 MSERHVTTWNAMI 511
Score = 166 bits (421), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 89/303 (29%), Positives = 170/303 (56%), Gaps = 1/303 (0%)
Query: 63 GLNNDTLTSNILINFYSKCGLISGARKVFDEMPQRCIVSWNTIIGSYTTNGREQEAVALF 122
GL + L++ + + G + A +VF+ + + V ++T++ + +A+ F
Sbjct: 64 GLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFF 123
Query: 123 INMLREGKTPYSEFTVSSVLCACAAKRDVFECKQLHVFALKAAMDRNVFVGTALLDVYAK 182
+ M + P + + +L C + ++ K++H +K+ ++F T L ++YAK
Sbjct: 124 VRMRYDDVEPVV-YNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAK 182
Query: 183 CGLISDASRVFESMPERNEVTWSSMVAGFVQNELYEEALILFRRAQVLGLEYNQFTISSV 242
C +++A +VF+ MPER+ V+W+++VAG+ QN + AL + + L+ + TI SV
Sbjct: 183 CRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSV 242
Query: 243 ICACAGLAALIQGKQVHAVLCKTGFGSNMFAASSLVDMYAKCGCVVDAYFVFSGIEEKNV 302
+ A + L + GK++H ++GF S + +++LVDMYAKCG + A +F G+ E+NV
Sbjct: 243 LPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNV 302
Query: 303 VLWNTMISGFSRHARSVEVMILFEKMQQAGLHPNEQTYISVLSACSHIGMVEKGKSYFDL 362
V WN+MI + ++ E M++F+KM G+ P + + + L AC+ +G +E+G+ L
Sbjct: 303 VSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKL 362
Query: 363 MVK 365
V+
Sbjct: 363 SVE 365
Score = 116 bits (290), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 150/289 (51%), Gaps = 6/289 (2%)
Query: 153 ECKQLHVFALKAAMDRNVFVGTALLDVYAKCGLISDASRVFESMPERNEVTWSSMVAGFV 212
E +Q+ K + + F T L+ ++ + G + +A+RVFE + + V + +M+ GF
Sbjct: 52 ELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFA 111
Query: 213 QNELYEEALILFRRAQVLGLEYNQFTISSVICACAGLAALIQGKQVHAVLCKTGFGSNMF 272
+ ++AL F R + +E + + ++ C A L GK++H +L K+GF ++F
Sbjct: 112 KVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLF 171
Query: 273 AASSLVDMYAKCGCVVDAYFVFSGIEEKNVVLWNTMISGFSRHARSVEVMILFEKMQQAG 332
A + L +MYAKC V +A VF + E+++V WNT+++G+S++ + + + + M +
Sbjct: 172 AMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEEN 231
Query: 333 LHPNEQTYISVLSACSHIGMVEKGKSYFDLMVKQ-HNVLPNVFHYSCMIDILGRAGLIHE 391
L P+ T +SVL A S + ++ GK ++ + L N+ + ++D+ + G +
Sbjct: 232 LKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNI--STALVDMYAKCGSLET 289
Query: 392 AYDLILNMPFDATASMWGSLLASCRNYRNLELAEIAAKQLF--GMEPDN 438
A L M + W S++ + N + A + +++ G++P +
Sbjct: 290 ARQLFDGM-LERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTD 337
Score = 53.5 bits (127), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 90/193 (46%), Gaps = 8/193 (4%)
Query: 246 CAGLAALIQGKQVHAVLCKTGFGSNMFAASSLVDMYAKCGCVVDAYFVFSGIEEKNVVLW 305
C+ L L +Q+ ++ K G F + LV ++ + G V +A VF I+ K VL+
Sbjct: 47 CSSLKEL---RQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLY 103
Query: 306 NTMISGFSRHARSVEVMILFEKMQQAGLHPNEQTYISVLSACSHIGMVEKGKSYFDLMVK 365
+TM+ GF++ + + + F +M+ + P + +L C + GK L+VK
Sbjct: 104 HTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVK 163
Query: 366 QHNVLPNVFHYSCMIDILGRAGLIHEAYDLILNMPFDATASMWGSLLASCRNYRNLELAE 425
L ++F + + ++ + ++EA + MP S W +++A Y +A
Sbjct: 164 SGFSL-DLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVS-WNTIVAG---YSQNGMAR 218
Query: 426 IAAKQLFGMEPDN 438
+A + + M +N
Sbjct: 219 MALEMVKSMCEEN 231
>sp|Q9STF3|PP265_ARATH Pentatricopeptide repeat-containing protein At3g46790,
chloroplastic OS=Arabidopsis thaliana GN=CRR2 PE=2 SV=1
Length = 657
Score = 430 bits (1106), Expect = e-119, Method: Compositional matrix adjust.
Identities = 223/559 (39%), Positives = 333/559 (59%), Gaps = 15/559 (2%)
Query: 56 HAKIIGMGLNNDTLTSNILINFYSKCGLISGARKVFDEMPQRCIVSWNTIIGSYTTNGRE 115
H I+ G + D + LI YS G + ARKVFD+ +R I WN + + T G
Sbjct: 100 HRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHG 159
Query: 116 QEAVALFINMLREGKTPYSEFTVSSVLCACAAKR----DVFECKQLHVFALKAAMDRNVF 171
+E + L+ M R G FT + VL AC A + + K++H + +V+
Sbjct: 160 EEVLGLYWKMNRIG-VESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVY 218
Query: 172 VGTALLDVYAKCGLISDASRVFESMPERNEVTWSSMVAGFVQNELYEEALILFRRA--QV 229
+ T L+D+YA+ G + AS VF MP RN V+WS+M+A + +N EAL FR +
Sbjct: 219 IMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRET 278
Query: 230 LGLEYNQFTISSVICACAGLAALIQGKQVHAVLCKTGFGSNMFAASSLVDMYAKCGCVVD 289
N T+ SV+ ACA LAAL QGK +H + + G S + S+LV MY +CG +
Sbjct: 279 KDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEV 338
Query: 290 AYFVFSGIEEKNVVLWNTMISGFSRHARSVEVMILFEKMQQAGLHPNEQTYISVLSACSH 349
VF + +++VV WN++IS + H + + +FE+M G P T++SVL ACSH
Sbjct: 339 GQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSH 398
Query: 350 IGMVEKGKSYFDLMVKQHNVLPNVFHYSCMIDILGRAGLIHEAYDLILNMPFDATASMWG 409
G+VE+GK F+ M + H + P + HY+CM+D+LGRA + EA ++ +M + +WG
Sbjct: 399 EGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWG 458
Query: 410 SLLASCRNYRNLELAEIAAKQLFGMEPDNAGNHLLLSNIYAANRRWEEVARARKLIRDSE 469
SLL SCR + N+ELAE A+++LF +EP NAGN++LL++IYA + W+EV R +KL+
Sbjct: 459 SLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRG 518
Query: 470 VKKEKSKSWVEIKGK--------RNHPRIAEIYSKLEKLVEEMKKLGYKPETEHDLHDVE 521
++K + W+E++ K +P + +I++ L KL E+MK+ GY P+T+ L+++E
Sbjct: 519 LQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAFLVKLAEDMKEKGYIPQTKGVLYELE 578
Query: 522 DSRKQELLIHHSEKLALTFGLMCLCPGVPIRIMKNLRICGDCHSFMKFASRIAGRETIVR 581
K+ +++ HSEKLAL FGL+ G PIRI KNLR+C DCH F KF S+ +E +VR
Sbjct: 579 TEEKERIVLGHSEKLALAFGLINTSKGEPIRITKNLRLCEDCHLFTKFISKFMEKEILVR 638
Query: 582 DLNRFHHFTNGSCSCWDFW 600
D+NRFH F NG CSC D+W
Sbjct: 639 DVNRFHRFKNGVCSCGDYW 657
Score = 143 bits (361), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 89/323 (27%), Positives = 173/323 (53%), Gaps = 17/323 (5%)
Query: 100 VSWNTIIGSYTTNGREQEAVALFINMLREGKTPYSEFTVSSVLCACAAKRDVFECKQLHV 159
+S N +I S G+ ++A I +L + +P S+ T ++ C + + + ++H
Sbjct: 47 ISNNQLIQSLCKEGKLKQA----IRVLSQESSP-SQQTYELLILCCGHRSSLSDALRVHR 101
Query: 160 FALKAAMDRNVFVGTALLDVYAKCGLISDASRVFESMPERNEVTWSSMVAGFVQNELYEE 219
L D++ F+ T L+ +Y+ G + A +VF+ +R W+++ EE
Sbjct: 102 HILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEE 161
Query: 220 ALILFRRAQVLGLEYNQFTISSVICACAG----LAALIQGKQVHAVLCKTGFGSNMFAAS 275
L L+ + +G+E ++FT + V+ AC + L++GK++HA L + G+ S+++ +
Sbjct: 162 VLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMT 221
Query: 276 SLVDMYAKCGCVVDAYFVFSGIEEKNVVLWNTMISGFSRHARSVEVMILFEKM--QQAGL 333
+LVDMYA+ GCV A +VF G+ +NVV W+ MI+ ++++ ++ E + F +M +
Sbjct: 222 TLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDS 281
Query: 334 HPNEQTYISVLSACSHIGMVEKGKSYFDLMVKQ--HNVLPNVFHYSCMIDILGRAGLIHE 391
PN T +SVL AC+ + +E+GK ++++ ++LP + S ++ + GR G + E
Sbjct: 282 SPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVI---SALVTMYGRCGKL-E 337
Query: 392 AYDLILNMPFDATASMWGSLLAS 414
+ + D W SL++S
Sbjct: 338 VGQRVFDRMHDRDVVSWNSLISS 360
Score = 112 bits (281), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 138/271 (50%), Gaps = 5/271 (1%)
Query: 50 VRGKVCHAKIIGMGLNNDTLTSNILINFYSKCGLISGARKVFDEMPQRCIVSWNTIIGSY 109
++GK HA + G ++ L++ Y++ G + A VF MP R +VSW+ +I Y
Sbjct: 199 MKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACY 258
Query: 110 TTNGREQEAVALFINMLREGK--TPYSEFTVSSVLCACAAKRDVFECKQLHVFALKAAMD 167
NG+ EA+ F M+RE K +P S T+ SVL ACA+ + + K +H + L+ +D
Sbjct: 259 AKNGKAFEALRTFREMMRETKDSSPNS-VTMVSVLQACASLAALEQGKLIHGYILRRGLD 317
Query: 168 RNVFVGTALLDVYAKCGLISDASRVFESMPERNEVTWSSMVAGFVQNELYEEALILFRRA 227
+ V +AL+ +Y +CG + RVF+ M +R+ V+W+S+++ + + ++A+ +F
Sbjct: 318 SILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEM 377
Query: 228 QVLGLEYNQFTISSVICACAGLAALIQGKQVHAVLCKT-GFGSNMFAASSLVDMYAKCGC 286
G T SV+ AC+ + +GK++ + + G + + +VD+ +
Sbjct: 378 LANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANR 437
Query: 287 VVDAYFVFSGIE-EKNVVLWNTMISGFSRHA 316
+ +A + + E +W +++ H
Sbjct: 438 LDEAAKMVQDMRTEPGPKVWGSLLGSCRIHG 468
Score = 84.3 bits (207), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 92/177 (51%), Gaps = 3/177 (1%)
Query: 35 TLQATLQSCARERAPVRGKVCHAKIIGMGLNNDTLTSNILINFYSKCGLISGARKVFDEM 94
T+ + LQ+CA A +GK+ H I+ GL++ + L+ Y +CG + ++VFD M
Sbjct: 287 TMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRM 346
Query: 95 PQRCIVSWNTIIGSYTTNGREQEAVALFINMLREGKTPYSEFTVSSVLCACAAKRDVFEC 154
R +VSWN++I SY +G ++A+ +F ML G +P + T SVL AC+ + V E
Sbjct: 347 HDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASP-TPVTFVSVLGACSHEGLVEEG 405
Query: 155 KQL-HVFALKAAMDRNVFVGTALLDVYAKCGLISDASRVFESM-PERNEVTWSSMVA 209
K+L + + ++D+ + + +A+++ + M E W S++
Sbjct: 406 KRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLG 462
>sp|Q8S9M4|PP198_ARATH Pentatricopeptide repeat-containing protein At2g41080
OS=Arabidopsis thaliana GN=PCMP-H29 PE=2 SV=2
Length = 650
Score = 430 bits (1106), Expect = e-119, Method: Compositional matrix adjust.
Identities = 225/610 (36%), Positives = 350/610 (57%), Gaps = 41/610 (6%)
Query: 31 TELSTLQATLQSCARERAPVRGKVCHAKIIGMGLNNDT---------------------- 68
T S +QSC ++ GK H ++ G ++D
Sbjct: 42 TNTSLFTPFIQSCTTRQSLPSGKQLHCLLVVSGFSSDKFICNHLMSMYSKLGDFPSAVAV 101
Query: 69 ---------LTSNILINFYSKCGLISGARKVFDEMPQRCIVSWNTIIGSYTTNGREQEAV 119
++SNILIN Y + G + ARKVFDEMP R + +WN +I +E +
Sbjct: 102 YGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGL 161
Query: 120 ALFINMLREGKTPYSEFTVSSVLCACAAKRDVFECKQLHVFALKAAMDRNVFVGTALLDV 179
+LF M G +P E+T+ SV A R V +Q+H + +K ++ ++ V ++L +
Sbjct: 162 SLFREMHGLGFSP-DEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHM 220
Query: 180 YAKCGLISDASRVFESMPERNEVTWSSMVAGFVQNELYEEALILFRRAQVLGLEYNQFTI 239
Y + G + D V SMP RN V W++++ G QN E L L++ ++ G N+ T
Sbjct: 221 YMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITF 280
Query: 240 SSVICACAGLAALIQGKQVHAVLCKTGFGSNMFAASSLVDMYAKCGCVVDAYFVFSGIEE 299
+V+ +C+ LA QG+Q+HA K G S + SSL+ MY+KCGC+ DA FS E+
Sbjct: 281 VTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSERED 340
Query: 300 KNVVLWNTMISGFSRHARSVEVMILFEKM-QQAGLHPNEQTYISVLSACSHIGMVEKGKS 358
++ V+W++MIS + H + E + LF M +Q + NE ++++L ACSH G+ +KG
Sbjct: 341 EDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLE 400
Query: 359 YFDLMVKQHNVLPNVFHYSCMIDILGRAGLIHEAYDLILNMPFDATASMWGSLLASCRNY 418
FD+MV+++ P + HY+C++D+LGRAG + +A +I +MP +W +LL++C +
Sbjct: 401 LFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIH 460
Query: 419 RNLELAEIAAKQLFGMEPDNAGNHLLLSNIYAANRRWEEVARARKLIRDSEVKKEKSKSW 478
+N E+A+ K++ ++P+++ ++LL+N++A+ +RW +V+ RK +RD VKKE SW
Sbjct: 461 KNAEMAQRVFKEILQIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISW 520
Query: 479 VEIKGK--------RNHPRIAEIYSKLEKLVEEMKKLGYKPETEHDLHDVEDSRKQELLI 530
E KG+ R+ + EIYS L++L EMK GYKP+T LHD+++ K+ L+
Sbjct: 521 FEHKGEVHQFKMGDRSQSKSKEIYSYLKELTLEMKLKGYKPDTASVLHDMDEEEKESDLV 580
Query: 531 HHSEKLALTFGLMCLCPGVPIRIMKNLRICGDCHSFMKFASRIAGRETIVRDLNRFHHFT 590
HSEKLA+ F LM L G PIRI+KNLR+C DCH K+ S I RE +RD +RFHHF
Sbjct: 581 QHSEKLAVAFALMILPEGAPIRIIKNLRVCSDCHVAFKYISVIKNREITLRDGSRFHHFI 640
Query: 591 NGSCSCWDFW 600
NG CSC D+W
Sbjct: 641 NGKCSCGDYW 650
Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 93/225 (41%), Gaps = 37/225 (16%)
Query: 219 EALILFRRAQVLGLEYNQFTISSVICACAGLAALIQGKQVHAVLCKTGFGSNMFAASSLV 278
EA FR L + N + I +C +L GKQ+H +L +GF S+ F + L+
Sbjct: 31 EAFQRFR----LNIFTNTSLFTPFIQSCTTRQSLPSGKQLHCLLVVSGFSSDKFICNHLM 86
Query: 279 DMYAK-------------------------------CGCVVDAYFVFSGIEEKNVVLWNT 307
MY+K G +V+A VF + ++ + WN
Sbjct: 87 SMYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNA 146
Query: 308 MISGFSRHARSVEVMILFEKMQQAGLHPNEQTYISVLSACSHIGMVEKGKSYFDLMVKQH 367
MI+G + + E + LF +M G P+E T SV S + + V G+ +K
Sbjct: 147 MIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYG 206
Query: 368 NVLPNVFHYSCMIDILGRAGLIHEAYDLILNMPFDATASMWGSLL 412
L V + S + + R G + + +I +MP + W +L+
Sbjct: 207 LELDLVVN-SSLAHMYMRNGKLQDGEIVIRSMPVRNLVA-WNTLI 249
>sp|Q9FIB2|PP373_ARATH Putative pentatricopeptide repeat-containing protein At5g09950
OS=Arabidopsis thaliana GN=PCMP-H35 PE=3 SV=1
Length = 995
Score = 429 bits (1104), Expect = e-119, Method: Compositional matrix adjust.
Identities = 235/580 (40%), Positives = 350/580 (60%), Gaps = 15/580 (2%)
Query: 35 TLQATLQSCARERAPVRGKVCHAKIIGMGLNNDTLTSNILINFYSKCGLISGARKVFDEM 94
TL ++L SCA + G+ H + + +G++ + SN L+ Y++ G ++ RK+F M
Sbjct: 417 TLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSM 476
Query: 95 PQRCIVSWNTIIGSYTTNGRE-QEAVALFINMLREGKTPYSEFTVSSVLCACAAKRDVFE 153
P+ VSWN+IIG+ + R EAV F+N R G+ + T SSVL A ++
Sbjct: 477 PEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQ-KLNRITFSSVLSAVSSLSFGEL 535
Query: 154 CKQLHVFALKAAMDRNVFVGTALLDVYAKCGLISDASRVFESMPERNE-VTWSSMVAGFV 212
KQ+H ALK + AL+ Y KCG + ++F M ER + VTW+SM++G++
Sbjct: 536 GKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYI 595
Query: 213 QNELYEEALILFRRAQVLGLEYNQFTISSVICACAGLAALIQGKQVHAVLCKTGFGSNMF 272
NEL +AL L G + F ++V+ A A +A L +G +VHA + S++
Sbjct: 596 HNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVV 655
Query: 273 AASSLVDMYAKCGCVVDAYFVFSGIEEKNVVLWNTMISGFSRHARSVEVMILFEKMQQAG 332
S+LVDMY+KCG + A F+ + +N WN+MISG++RH + E + LFE M+ G
Sbjct: 656 VGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDG 715
Query: 333 LHPNEQ-TYISVLSACSHIGMVEKGKSYFDLMVKQHNVLPNVFHYSCMIDILGRAGLIHE 391
P + T++ VLSACSH G++E+G +F+ M + + P + H+SCM D+LGRAG + +
Sbjct: 716 QTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDK 775
Query: 392 AYDLILNMPFDATASMWGSLLASC--RNYRNLELAEIAAKQLFGMEPDNAGNHLLLSNIY 449
D I MP +W ++L +C N R EL + AA+ LF +EP+NA N++LL N+Y
Sbjct: 776 LEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMY 835
Query: 450 AANRRWEEVARARKLIRDSEVKKEKSKSWVEIK--------GKRNHPRIAEIYSKLEKLV 501
AA RWE++ +ARK ++D++VKKE SWV +K G ++HP IY KL++L
Sbjct: 836 AAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKELN 895
Query: 502 EEMKKLGYKPETEHDLHDVEDSRKQELLIHHSEKLALTFGLMCL-CPGVPIRIMKNLRIC 560
+M+ GY P+T L+D+E K+E+L +HSEKLA+ F L +PIRIMKNLR+C
Sbjct: 896 RKMRDAGYVPQTGFALYDLEQENKEEILSYHSEKLAVAFVLAAQRSSTLPIRIMKNLRVC 955
Query: 561 GDCHSFMKFASRIAGRETIVRDLNRFHHFTNGSCSCWDFW 600
GDCHS K+ S+I GR+ I+RD NRFHHF +G+CSC DFW
Sbjct: 956 GDCHSAFKYISKIEGRQIILRDSNRFHHFQDGACSCSDFW 995
Score = 132 bits (333), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 101/356 (28%), Positives = 179/356 (50%), Gaps = 6/356 (1%)
Query: 63 GLNNDTLTSNILINFYSKCGLISGARKVFDEMPQRCIVSWNTIIGSYTTNGREQEAVALF 122
GL D + L++ ++K G +S ARKVF++M R V+ N ++ +EA LF
Sbjct: 238 GLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLF 297
Query: 123 INM---LREGKTPYSEFTVSSVLCACAAKRDVFECKQLHVFALKAAM-DRNVFVGTALLD 178
++M + Y S + A + + + +++H + + D V +G L++
Sbjct: 298 MDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVN 357
Query: 179 VYAKCGLISDASRVFESMPERNEVTWSSMVAGFVQNELYEEALILFRRAQVLGLEYNQFT 238
+YAKCG I+DA RVF M +++ V+W+SM+ G QN + EA+ ++ + + FT
Sbjct: 358 MYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFT 417
Query: 239 ISSVICACAGLAALIQGKQVHAVLCKTGFGSNMFAASSLVDMYAKCGCVVDAYFVFSGIE 298
+ S + +CA L G+Q+H K G N+ +++L+ +YA+ G + + +FS +
Sbjct: 418 LISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMP 477
Query: 299 EKNVVLWNTMISGFSRHARSV-EVMILFEKMQQAGLHPNEQTYISVLSACSHIGMVEKGK 357
E + V WN++I +R RS+ E ++ F Q+AG N T+ SVLSA S + E GK
Sbjct: 478 EHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGK 537
Query: 358 SYFDLMVKQHNVLPNVFHYSCMIDILGRAGLIHEAYDLILNMPFDATASMWGSLLA 413
L +K +N+ + +I G+ G + + M W S+++
Sbjct: 538 QIHGLALK-NNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMIS 592
Score = 127 bits (320), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 100/356 (28%), Positives = 163/356 (45%), Gaps = 27/356 (7%)
Query: 40 LQSCARERAPVRGKVCHAKIIGMGLNNDTLTSNILINFYSKCGLISGARKVFDEMPQRCI 99
+QSC R R H+++ L+ D N LIN Y + G ARKVFDEMP R
Sbjct: 10 VQSCVGHRGAAR--FFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNC 67
Query: 100 VSWNTIIGSYTTNGREQEAVALFINMLREGKTPYSEFTVSSVLCACA--AKRDVFECKQL 157
VSW I+ Y+ NG +EA+ +M++EG +++ SVL AC + +Q+
Sbjct: 68 VSWACIVSGYSRNGEHKEALVFLRDMVKEGIFS-NQYAFVSVLRACQEIGSVGILFGRQI 126
Query: 158 HVFALKAAMDRNVFVGTALLDVYAKC-GLISDASRVFESMPERNEVTWSSMVAGFVQNEL 216
H K + + V L+ +Y KC G + A F + +N V+W+S+++ + Q
Sbjct: 127 HGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGD 186
Query: 217 YEEALILFRRAQVLGLEYNQFTISSVICACAGLAA----LIQGKQVHAVLCKTGFGSNMF 272
A +F Q G ++T S++ L L++ Q+ + K+G +++F
Sbjct: 187 QRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLE--QIMCTIQKSGLLTDLF 244
Query: 273 AASSLVDMYAKCGCVVDAYFVFSGIEEKNVVLWNTMISGFSRHARSVEVMILFEKMQQAG 332
S LV +AK G + A VF+ +E +N V N ++ G R E LF M
Sbjct: 245 VGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSM- 303
Query: 333 LHPNEQTYISVLSACSHIGMVE-----KGK---------SYFDLMVKQHNVLPNVF 374
+ + ++Y+ +LS+ + E KG+ D MV N L N++
Sbjct: 304 IDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMY 359
>sp|Q9SMZ2|PP347_ARATH Pentatricopeptide repeat-containing protein At4g33170
OS=Arabidopsis thaliana GN=PCMP-H53 PE=3 SV=1
Length = 990
Score = 429 bits (1102), Expect = e-119, Method: Compositional matrix adjust.
Identities = 210/556 (37%), Positives = 348/556 (62%), Gaps = 10/556 (1%)
Query: 53 KVCHAKIIGMGLNNDTLTSNILINFYSKCGLISGARKVFDEMPQRCIVSWNTIIGSYTTN 112
K H I + +D+ S LI+ YS+ + A +F E +V+WN ++ YT +
Sbjct: 437 KQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILF-ERHNFDLVAWNAMMAGYTQS 495
Query: 113 GREQEAVALFINMLREGKTPYSEFTVSSVLCACAAKRDVFECKQLHVFALKAAMDRNVFV 172
+ + LF M ++G+ +FT+++V C + + KQ+H +A+K+ D +++V
Sbjct: 496 HDGHKTLKLFALMHKQGERS-DDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWV 554
Query: 173 GTALLDVYAKCGLISDASRVFESMPERNEVTWSSMVAGFVQNELYEEALILFRRAQVLGL 232
+ +LD+Y KCG +S A F+S+P ++V W++M++G ++N E A +F + +++G+
Sbjct: 555 SSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGV 614
Query: 233 EYNQFTISSVICACAGLAALIQGKQVHAVLCKTGFGSNMFAASSLVDMYAKCGCVVDAYF 292
++FTI+++ A + L AL QG+Q+HA K ++ F +SLVDMYAKCG + DAY
Sbjct: 615 LPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYC 674
Query: 293 VFSGIEEKNVVLWNTMISGFSRHARSVEVMILFEKMQQAGLHPNEQTYISVLSACSHIGM 352
+F IE N+ WN M+ G ++H E + LF++M+ G+ P++ T+I VLSACSH G+
Sbjct: 675 LFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGL 734
Query: 353 VEKGKSYFDLMVKQHNVLPNVFHYSCMIDILGRAGLIHEAYDLILNMPFDATASMWGSLL 412
V + + M + + P + HYSC+ D LGRAGL+ +A +LI +M +A+ASM+ +LL
Sbjct: 735 VSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLL 794
Query: 413 ASCRNYRNLELAEIAAKQLFGMEPDNAGNHLLLSNIYAANRRWEEVARARKLIRDSEVKK 472
A+CR + E + A +L +EP ++ ++LLSN+YAA +W+E+ AR +++ +VKK
Sbjct: 795 AACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKK 854
Query: 473 EKSKSWVEIKGK--------RNHPRIAEIYSKLEKLVEEMKKLGYKPETEHDLHDVEDSR 524
+ SW+E+K K R++ + IY K++ ++ ++K+ GY PET+ L DVE+
Sbjct: 855 DPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMIRDIKQEGYVPETDFTLVDVEEEE 914
Query: 525 KQELLIHHSEKLALTFGLMCLCPGVPIRIMKNLRICGDCHSFMKFASRIAGRETIVRDLN 584
K+ L +HSEKLA+ FGL+ P PIR++KNLR+CGDCH+ MK+ +++ RE ++RD N
Sbjct: 915 KERALYYHSEKLAVAFGLLSTPPSTPIRVIKNLRVCGDCHNAMKYIAKVYNREIVLRDAN 974
Query: 585 RFHHFTNGSCSCWDFW 600
RFH F +G CSC D+W
Sbjct: 975 RFHRFKDGICSCGDYW 990
Score = 188 bits (477), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 135/443 (30%), Positives = 221/443 (49%), Gaps = 16/443 (3%)
Query: 2 KSLLRYKHKFYYKSFSSSAIASASANANATELSTLQAT----LQSCARERAPVRGKVCHA 57
K L Y H Y SA+ A+ +++ Q T L + + + G+ H
Sbjct: 285 KGLSEYLHSGQY-----SALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHC 339
Query: 58 KIIGMGLNNDTLTSNILINFYSKCGLISGARKVFDEMPQRCIVSWNTIIGSYTTNGREQE 117
+ +GL+ SN LIN Y K AR VFD M +R ++SWN++I NG E E
Sbjct: 340 MALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVE 399
Query: 118 AVALFINMLREGKTPYSEFTVSSVLCACAAKRDVFE-CKQLHVFALKAAMDRNVFVGTAL 176
AV LF+ +LR G P ++T++SVL A ++ + KQ+HV A+K + FV TAL
Sbjct: 400 AVCLFMQLLRCGLKP-DQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTAL 458
Query: 177 LDVYAKCGLISDASRVFESMPERNEVTWSSMVAGFVQNELYEEALILFRRAQVLGLEYNQ 236
+D Y++ + +A +FE + V W++M+AG+ Q+ + L LF G +
Sbjct: 459 IDAYSRNRCMKEAEILFER-HNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDD 517
Query: 237 FTISSVICACAGLAALIQGKQVHAVLCKTGFGSNMFAASSLVDMYAKCGCVVDAYFVFSG 296
FT+++V C L A+ QGKQVHA K+G+ +++ +S ++DMY KCG + A F F
Sbjct: 518 FTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDS 577
Query: 297 IEEKNVVLWNTMISGFSRHARSVEVMILFEKMQQAGLHPNEQTYISVLSACSHIGMVEKG 356
I + V W TMISG + +F +M+ G+ P+E T ++ A S + +E+G
Sbjct: 578 IPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQG 637
Query: 357 KSYFDLMVKQHNVLPNVFHYSCMIDILGRAGLIHEAYDLILNMPFDATASMWGSLLASCR 416
+ +K N + F + ++D+ + G I +AY L + + W ++L
Sbjct: 638 RQIHANALKL-NCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEM-MNITAWNAMLVGLA 695
Query: 417 NYRNLELAEIAAKQL--FGMEPD 437
+ + KQ+ G++PD
Sbjct: 696 QHGEGKETLQLFKQMKSLGIKPD 718
Score = 116 bits (291), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 67/193 (34%), Positives = 105/193 (54%), Gaps = 6/193 (3%)
Query: 52 GKVCHAKIIGMGLNNDTLTSNILINFYSKCGLISGARKVFDEMPQRCIVSWNTIIGSYTT 111
GK HA+I+ N + N LI+ YSKCG ++ AR+VFD+MP R +VSWN+I+ +Y
Sbjct: 58 GKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQ 117
Query: 112 NGR-----EQEAVALFINMLREGKTPYSEFTVSSVLCACAAKRDVFECKQLHVFALKAAM 166
+ Q+A LF +LR+ S T+S +L C V+ + H +A K +
Sbjct: 118 SSECVVENIQQAFLLF-RILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGL 176
Query: 167 DRNVFVGTALLDVYAKCGLISDASRVFESMPERNEVTWSSMVAGFVQNELYEEALILFRR 226
D + FV AL+++Y K G + + +FE MP R+ V W+ M+ +++ EEA+ L
Sbjct: 177 DGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSA 236
Query: 227 AQVLGLEYNQFTI 239
GL N+ T+
Sbjct: 237 FHSSGLNPNEITL 249
Score = 97.8 bits (242), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 100/192 (52%), Gaps = 7/192 (3%)
Query: 153 ECKQLHVFALKAAMDRNVFVGTALLDVYAKCGLISDASRVFESMPERNEVTWSSMVAGFV 212
+C + + +R F+ L+ +Y+KCG ++ A RVF+ MP+R+ V+W+S++A +
Sbjct: 59 KCTHARILTFEENPER--FLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYA 116
Query: 213 QN-----ELYEEALILFRRAQVLGLEYNQFTISSVICACAGLAALIQGKQVHAVLCKTGF 267
Q+ E ++A +LFR + + ++ T+S ++ C + + H CK G
Sbjct: 117 QSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGL 176
Query: 268 GSNMFAASSLVDMYAKCGCVVDAYFVFSGIEEKNVVLWNTMISGFSRHARSVEVMILFEK 327
+ F A +LV++Y K G V + +F + ++VVLWN M+ + E + L
Sbjct: 177 DGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSA 236
Query: 328 MQQAGLHPNEQT 339
+GL+PNE T
Sbjct: 237 FHSSGLNPNEIT 248
Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 79/166 (47%), Gaps = 7/166 (4%)
Query: 252 LIQGKQVHAVLCKTGFGSNMFAASSLVDMYAKCGCVVDAYFVFSGIEEKNVVLWNTMISG 311
L+ GK HA + F ++L+ MY+KCG + A VF + ++++V WN++++
Sbjct: 55 LMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAA 114
Query: 312 FSRHARSV-----EVMILFEKMQQAGLHPNEQTYISVLSACSHIGMVEKGKSYFDLMVKQ 366
+++ + V + +LF ++Q ++ + T +L C H G V +S+ K
Sbjct: 115 YAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKI 174
Query: 367 HNVLPNVFHYSCMIDILGRAGLIHEAYDLILNMPFDATASMWGSLL 412
+ + F +++I + G + E L MP+ +W +L
Sbjct: 175 -GLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVV-LWNLML 218
>sp|Q9LTV8|PP224_ARATH Pentatricopeptide repeat-containing protein At3g12770
OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1
Length = 694
Score = 427 bits (1098), Expect = e-118, Method: Compositional matrix adjust.
Identities = 205/576 (35%), Positives = 344/576 (59%), Gaps = 12/576 (2%)
Query: 35 TLQATLQSCARERAPVRGKVCHAKIIGMGLNNDTLTSNILINFYSKCGLISGARKVFD-- 92
T L++C+ G+ HA++ +G + D N LI Y+KC + AR VF+
Sbjct: 121 TFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGL 180
Query: 93 EMPQRCIVSWNTIIGSYTTNGREQEAVALFINMLREGKTPYSEFTVSSVLCACAAKRDVF 152
+P+R IVSW I+ +Y NG EA+ +F M + P + SVL A +D+
Sbjct: 181 PLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKP-DWVALVSVLNAFTCLQDLK 239
Query: 153 ECKQLHVFALKAAMDRNVFVGTALLDVYAKCGLISDASRVFESMPERNEVTWSSMVAGFV 212
+ + +H +K ++ + +L +YAKCG ++ A +F+ M N + W++M++G+
Sbjct: 240 QGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYA 299
Query: 213 QNELYEEALILFRRAQVLGLEYNQFTISSVICACAGLAALIQGKQVHAVLCKTGFGSNMF 272
+N EA+ +F + + +I+S I ACA + +L Q + ++ + ++ + ++F
Sbjct: 300 KNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVF 359
Query: 273 AASSLVDMYAKCGCVVDAYFVFSGIEEKNVVLWNTMISGFSRHARSVEVMILFEKMQQAG 332
+S+L+DM+AKCG V A VF +++VV+W+ MI G+ H R+ E + L+ M++ G
Sbjct: 360 ISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGG 419
Query: 333 LHPNEQTYISVLSACSHIGMVEKGKSYFDLMVKQHNVLPNVFHYSCMIDILGRAGLIHEA 392
+HPN+ T++ +L AC+H GMV +G +F+ M H + P HY+C+ID+LGRAG + +A
Sbjct: 420 VHPNDVTFLGLLMACNHSGMVREGWWFFNRMA-DHKINPQQQHYACVIDLLGRAGHLDQA 478
Query: 393 YDLILNMPFDATASMWGSLLASCRNYRNLELAEIAAKQLFGMEPDNAGNHLLLSNIYAAN 452
Y++I MP ++WG+LL++C+ +R++EL E AA+QLF ++P N G+++ LSN+YAA
Sbjct: 479 YEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAA 538
Query: 453 RRWEEVARARKLIRDSEVKKEKSKSWVEIKGK--------RNHPRIAEIYSKLEKLVEEM 504
R W+ VA R +++ + K+ SWVE++G+ ++HPR EI ++E + +
Sbjct: 539 RLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRL 598
Query: 505 KKLGYKPETEHDLHDVEDSRKQELLIHHSEKLALTFGLMCLCPGVPIRIMKNLRICGDCH 564
K+ G+ + LHD+ D +E L HSE++A+ +GL+ G P+RI KNLR C +CH
Sbjct: 599 KEGGFVANKDASLHDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRITKNLRACVNCH 658
Query: 565 SFMKFASRIAGRETIVRDLNRFHHFTNGSCSCWDFW 600
+ K S++ RE +VRD NRFHHF +G CSC D+W
Sbjct: 659 AATKLISKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694
Score = 192 bits (489), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 120/399 (30%), Positives = 209/399 (52%), Gaps = 17/399 (4%)
Query: 16 FSSSAIASASANANATELSTLQATLQSCARERAPVRGKVCHAKIIGMGLNNDTLTSNILI 75
+++S I S S A+ + +T +A L K HA+++ +GL LI
Sbjct: 13 YTNSGIHSDSFYASLIDSATHKAQL------------KQIHARLLVLGLQFSGFLITKLI 60
Query: 76 NFYSKCGLISGARKVFDEMPQRCIVSWNTIIGSYTTNGREQEAVALFINMLREGKTPYSE 135
+ S G I+ AR+VFD++P+ I WN II Y+ N Q+A+ ++ NM +P S
Sbjct: 61 HASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDS- 119
Query: 136 FTVSSVLCACAAKRDVFECKQLHVFALKAAMDRNVFVGTALLDVYAKCGLISDASRVFES 195
FT +L AC+ + + +H + D +VFV L+ +YAKC + A VFE
Sbjct: 120 FTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEG 179
Query: 196 --MPERNEVTWSSMVAGFVQNELYEEALILFRRAQVLGLEYNQFTISSVICACAGLAALI 253
+PER V+W+++V+ + QN EAL +F + + + ++ + + SV+ A L L
Sbjct: 180 LPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLK 239
Query: 254 QGKQVHAVLCKTGFGSNMFAASSLVDMYAKCGCVVDAYFVFSGIEEKNVVLWNTMISGFS 313
QG+ +HA + K G SL MYAKCG V A +F ++ N++LWN MISG++
Sbjct: 240 QGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYA 299
Query: 314 RHARSVEVMILFEKMQQAGLHPNEQTYISVLSACSHIGMVEKGKSYFDLMVKQHNVLPNV 373
++ + E + +F +M + P+ + S +SAC+ +G +E+ +S ++ V + + +V
Sbjct: 300 KNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEY-VGRSDYRDDV 358
Query: 374 FHYSCMIDILGRAGLIHEAYDLILNMPFDATASMWGSLL 412
F S +ID+ + G + E L+ + D +W +++
Sbjct: 359 FISSALIDMFAKCGSV-EGARLVFDRTLDRDVVVWSAMI 396
>sp|Q9CAA8|PP108_ARATH Putative pentatricopeptide repeat-containing protein At1g68930
OS=Arabidopsis thaliana GN=PCMP-H22 PE=3 SV=1
Length = 743
Score = 426 bits (1094), Expect = e-118, Method: Compositional matrix adjust.
Identities = 223/611 (36%), Positives = 351/611 (57%), Gaps = 38/611 (6%)
Query: 27 NANATELSTLQATLQSCARERAPVRGKVCHAKIIGMGLNNDTLTSNILINFYSKCGLISG 86
+AN T + TL L+ + GK H ++I +G + L + L+ Y+ G IS
Sbjct: 134 SANLTRV-TLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISD 192
Query: 87 ARKVFDEMPQRCIVSWNTIIGSYTTNGREQEAVALFINM--------------------- 125
A+KVF + R V +N+++G G ++A+ LF M
Sbjct: 193 AKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAK 252
Query: 126 -----LREGKT---PYSEFTVSSVLCACAAKRDVFECKQLHVFALKAAMDRNVFVGTALL 177
RE K ++ SVL AC + E KQ+H ++ +++VG+AL+
Sbjct: 253 EAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALI 312
Query: 178 DVYAKCGLISDASRVFESMPERNEVTWSSMVAGFVQNELYEEALILFRRAQVLGLEYNQF 237
D+Y KC + A VF+ M ++N V+W++MV G+ Q EEA+ +F Q G++ + +
Sbjct: 313 DMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHY 372
Query: 238 TISSVICACAGLAALIQGKQVHAVLCKTGFGSNMFAASSLVDMYAKCGCVVDAYFVFSGI 297
T+ I ACA +++L +G Q H +G + ++SLV +Y KCG + D+ +F+ +
Sbjct: 373 TLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEM 432
Query: 298 EEKNVVLWNTMISGFSRHARSVEVMILFEKMQQAGLHPNEQTYISVLSACSHIGMVEKGK 357
++ V W M+S +++ R+VE + LF+KM Q GL P+ T V+SACS G+VEKG+
Sbjct: 433 NVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQ 492
Query: 358 SYFDLMVKQHNVLPNVFHYSCMIDILGRAGLIHEAYDLILNMPFDATASMWGSLLASCRN 417
YF LM ++ ++P++ HYSCMID+ R+G + EA I MPF A W +LL++CRN
Sbjct: 493 RYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRN 552
Query: 418 YRNLELAEIAAKQLFGMEPDNAGNHLLLSNIYAANRRWEEVARARKLIRDSEVKKEKSKS 477
NLE+ + AA+ L ++P + + LLS+IYA+ +W+ VA+ R+ +R+ VKKE +S
Sbjct: 553 KGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQS 612
Query: 478 WVEIKGK--------RNHPRIAEIYSKLEKLVEEMKKLGYKPETEHDLHDVEDSRKQELL 529
W++ KGK + P + +IY+KLE+L ++ GYKP+T HDVE++ K ++L
Sbjct: 613 WIKWKGKLHSFSADDESSPYLDQIYAKLEELNNKIIDNGYKPDTSFVHHDVEEAVKVKML 672
Query: 530 IHHSEKLALTFGLMCLCPGVPIRIMKNLRICGDCHSFMKFASRIAGRETIVRDLNRFHHF 589
+HSE+LA+ FGL+ + G PIR+ KNLR+C DCH+ K S + GRE +VRD RFH F
Sbjct: 673 NYHSERLAIAFGLIFVPSGQPIRVGKNLRVCVDCHNATKHISSVTGREILVRDAVRFHRF 732
Query: 590 TNGSCSCWDFW 600
+G+CSC DFW
Sbjct: 733 KDGTCSCGDFW 743
Score = 201 bits (510), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 123/431 (28%), Positives = 220/431 (51%), Gaps = 46/431 (10%)
Query: 72 NILINFYSKCGLISGARKVFDEMPQRCIVSWNTIIGSYTTNGREQEAVALFINMLREGKT 131
N L+ YSK GLIS F+++P R V+WN +I Y+ +G AV + M+R+
Sbjct: 76 NNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSA 135
Query: 132 PYSEFTVSSVLCACAAKRDVFECKQLHVFALKAAMDRNVFVGTALLDVYAKCGLISDASR 191
+ T+ ++L ++ V KQ+H +K + + VG+ LL +YA G ISDA +
Sbjct: 136 NLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKK 195
Query: 192 VFESMPERN------------------------------EVTWSSMVAGFVQNELYEEAL 221
VF + +RN V+W++M+ G QN L +EA+
Sbjct: 196 VFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAI 255
Query: 222 ILFRRAQVLGLEYNQFTISSVICACAGLAALIQGKQVHAVLCKTGFGSNMFAASSLVDMY 281
FR +V GL+ +Q+ SV+ AC GL A+ +GKQ+HA + +T F +++ S+L+DMY
Sbjct: 256 ECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMY 315
Query: 282 AKCGCVVDAYFVFSGIEEKNVVLWNTMISGFSRHARSVEVMILFEKMQQAGLHPNEQTYI 341
KC C+ A VF +++KNVV W M+ G+ + R+ E + +F MQ++G+ P+ T
Sbjct: 316 CKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLG 375
Query: 342 SVLSACSHIGMVEKGKSYFDLMVKQHNVLPNVFHY----SCMIDILGRAGLIHEAYDLIL 397
+SAC+++ +E+G + + + HY + ++ + G+ G I ++ L
Sbjct: 376 QAISACANVSSLEEGSQFHG-----KAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFN 430
Query: 398 NMPFDATASMWGSLLASCRNY-RNLELAEIAAKQL-FGMEPDNAGNHLLLSNIYAANRRW 455
M S W +++++ + R +E ++ K + G++PD + L+ + +A R
Sbjct: 431 EMNVRDAVS-WTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDG----VTLTGVISACSRA 485
Query: 456 EEVARARKLIR 466
V + ++ +
Sbjct: 486 GLVEKGQRYFK 496
Score = 105 bits (262), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 141/306 (46%), Gaps = 41/306 (13%)
Query: 169 NVFVGTALLDVYAKCGLISDASRVFESMPERNEVTWSSMVAGFVQNELYEEALILFRR-A 227
N+F LL Y+K GLIS+ FE +P+R+ VTW+ ++ G+ + L A+ +
Sbjct: 71 NLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMM 130
Query: 228 QVLGLEYNQFTISSVICACAGLAALIQGKQVHAVLCKTGFGSNMFAASSLVDMYAKCGCV 287
+ + T+ +++ + + GKQ+H + K GF S + S L+ MYA GC+
Sbjct: 131 RDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCI 190
Query: 288 VDAYFVFSGIEEKNVVLWNT------------------------------MISGFSRHAR 317
DA VF G++++N V++N+ MI G +++
Sbjct: 191 SDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGL 250
Query: 318 SVEVMILFEKMQQAGLHPNEQTYISVLSACSHIGMVEKGKSYFDLMVKQHNVLPNVFHYS 377
+ E + F +M+ GL ++ + SVL AC +G + +GK +++ N +++ S
Sbjct: 251 AKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRT-NFQDHIYVGS 309
Query: 378 CMIDILGRAGLIHEAYDLILNMPFDATASMWGSLLASCRNYRNLELAEIAAK-----QLF 432
+ID+ + +H A + M S W +++ Y AE A K Q
Sbjct: 310 ALIDMYCKCKCLHYAKTVFDRMKQKNVVS-WTAMVV---GYGQTGRAEEAVKIFLDMQRS 365
Query: 433 GMEPDN 438
G++PD+
Sbjct: 366 GIDPDH 371
>sp|Q9SUH6|PP341_ARATH Pentatricopeptide repeat-containing protein At4g30700
OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1
Length = 792
Score = 426 bits (1094), Expect = e-118, Method: Compositional matrix adjust.
Identities = 207/535 (38%), Positives = 328/535 (61%), Gaps = 12/535 (2%)
Query: 74 LINFYSKCGLISGARKVFDEMPQRCIVSWNTIIGSYTTNGREQEAVALFINMLREGKTPY 133
I+ YSKCG I +F E + IV++N +I YT+NG + +++LF ++ G
Sbjct: 262 FISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSG---- 317
Query: 134 SEFTVSSVLCACAAKRDVFECKQLHVFALKAAMDRNVFVGTALLDVYAKCGLISDASRVF 193
+ S+++ + +H + LK+ + V TAL VY+K I A ++F
Sbjct: 318 ARLRSSTLVSLVPVSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLF 377
Query: 194 ESMPERNEVTWSSMVAGFVQNELYEEALILFRRAQVLGLEYNQFTISSVICACAGLAALI 253
+ PE++ +W++M++G+ QN L E+A+ LFR Q N TI+ ++ ACA L AL
Sbjct: 378 DESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALS 437
Query: 254 QGKQVHAVLCKTGFGSNMFAASSLVDMYAKCGCVVDAYFVFSGIEEKNVVLWNTMISGFS 313
GK VH ++ T F S+++ +++L+ MYAKCG + +A +F + +KN V WNTMISG+
Sbjct: 438 LGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYG 497
Query: 314 RHARSVEVMILFEKMQQAGLHPNEQTYISVLSACSHIGMVEKGKSYFDLMVKQHNVLPNV 373
H + E + +F +M +G+ P T++ VL ACSH G+V++G F+ M+ ++ P+V
Sbjct: 498 LHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSV 557
Query: 374 FHYSCMIDILGRAGLIHEAYDLILNMPFDATASMWGSLLASCRNYRNLELAEIAAKQLFG 433
HY+CM+DILGRAG + A I M + +S+W +LL +CR +++ LA +++LF
Sbjct: 558 KHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFE 617
Query: 434 MEPDNAGNHLLLSNIYAANRRWEEVARARKLIRDSEVKKEKSKSWVEI--------KGKR 485
++PDN G H+LLSNI++A+R + + A R+ + ++ K + +EI G +
Sbjct: 618 LDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQ 677
Query: 486 NHPRIAEIYSKLEKLVEEMKKLGYKPETEHDLHDVEDSRKQELLIHHSEKLALTFGLMCL 545
+HP++ EIY KLEKL +M++ GY+PETE LHDVE+ ++ ++ HSE+LA+ FGL+
Sbjct: 678 SHPQVKEIYEKLEKLEGKMREAGYQPETELALHDVEEEERELMVKVHSERLAIAFGLIAT 737
Query: 546 CPGVPIRIMKNLRICGDCHSFMKFASRIAGRETIVRDLNRFHHFTNGSCSCWDFW 600
PG IRI+KNLR+C DCH+ K S+I R +VRD NRFHHF +G CSC D+W
Sbjct: 738 EPGTEIRIIKNLRVCLDCHTVTKLISKITERVIVVRDANRFHHFKDGVCSCGDYW 792
Score = 154 bits (389), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 97/348 (27%), Positives = 180/348 (51%), Gaps = 7/348 (2%)
Query: 52 GKVCHAKIIGMGLNNDTLTSNILINFYSKCGLISGARKVFDEMPQRCIVSWNTIIGSYTT 111
G+V H + + G +++ L + ++ Y K + ARKVFD MP++ + WNT+I Y
Sbjct: 138 GRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRK 197
Query: 112 NGREQEAVALFINMLREGKTPYSEFTVSSVLCACAAKRDVFECKQLHVFALKAAMDRNVF 171
N E++ +F +++ E T T+ +L A A +++ Q+H A K + +
Sbjct: 198 NEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDY 257
Query: 172 VGTALLDVYAKCGLISDASRVFESMPERNEVTWSSMVAGFVQNELYEEALILFRRAQVLG 231
V T + +Y+KCG I S +F + + V +++M+ G+ N E +L LF+ + G
Sbjct: 258 VLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSG 317
Query: 232 LEYNQFTISSVICACAGLAALIQGKQVHAVLCKTGFGSNMFAASSLVDMYAKCGCVVDAY 291
T+ S++ +G LI +H K+ F S+ +++L +Y+K + A
Sbjct: 318 ARLRSSTLVSLV-PVSGHLMLIYA--IHGYCLKSNFLSHASVSTALTTVYSKLNEIESAR 374
Query: 292 FVFSGIEEKNVVLWNTMISGFSRHARSVEVMILFEKMQQAGLHPNEQTYISVLSACSHIG 351
+F EK++ WN MISG++++ + + + LF +MQ++ PN T +LSAC+ +G
Sbjct: 375 KLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLG 434
Query: 352 MVEKGKSYFDLMVKQHNVLPNVFHYSCMIDILGRAGLIHEA---YDLI 396
+ GK DL V+ + +++ + +I + + G I EA +DL+
Sbjct: 435 ALSLGKWVHDL-VRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLM 481
Score = 124 bits (312), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 151/299 (50%), Gaps = 1/299 (0%)
Query: 56 HAKIIGMGLNNDTLTSNILINFYSKCGLISGARKVFDEMPQRCIVSWNTIIGSYTTNGRE 115
HA+II G ND L S G I AR +F + + + +N ++ ++ N
Sbjct: 40 HAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESP 99
Query: 116 QEAVALFINMLREGKTPYSEFTVSSVLCACAAKRDVFECKQLHVFALKAAMDRNVFVGTA 175
++++F ++ + + T + + A + RD + +H A+ D + +G+
Sbjct: 100 HSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSN 159
Query: 176 LLDVYAKCGLISDASRVFESMPERNEVTWSSMVAGFVQNELYEEALILFRR-AQVLGLEY 234
++ +Y K + DA +VF+ MPE++ + W++M++G+ +NE+Y E++ +FR
Sbjct: 160 IVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRL 219
Query: 235 NQFTISSVICACAGLAALIQGKQVHAVLCKTGFGSNMFAASSLVDMYAKCGCVVDAYFVF 294
+ T+ ++ A A L L G Q+H++ KTG S+ + + + +Y+KCG + +F
Sbjct: 220 DTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALF 279
Query: 295 SGIEEKNVVLWNTMISGFSRHARSVEVMILFEKMQQAGLHPNEQTYISVLSACSHIGMV 353
+ ++V +N MI G++ + + + LF+++ +G T +S++ H+ ++
Sbjct: 280 REFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLI 338
Score = 41.6 bits (96), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 46/93 (49%), Gaps = 1/93 (1%)
Query: 257 QVHAVLCKTGFGSNMFAASSLVDMYAKCGCVVDAYFVFSGIEEKNVVLWNTMISGFSRHA 316
Q HA + GF +++ + L + G + A +F ++ +V L+N ++ GFS +
Sbjct: 38 QTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNE 97
Query: 317 RSVEVMILFEKMQQA-GLHPNEQTYISVLSACS 348
+ +F ++++ L PN TY +SA S
Sbjct: 98 SPHSSLSVFAHLRKSTDLKPNSSTYAFAISAAS 130
>sp|Q9LYU9|PP378_ARATH Pentatricopeptide repeat-containing protein At5g13270,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H90 PE=2
SV=1
Length = 752
Score = 424 bits (1091), Expect = e-118, Method: Compositional matrix adjust.
Identities = 224/591 (37%), Positives = 339/591 (57%), Gaps = 31/591 (5%)
Query: 26 ANANATELSTLQATLQSCARERAPVRGKVCHAKIIGMGLNNDTLTSNILINFYSKCGLIS 85
A+ + S L+S RA G+ HA +I GL ++T ++N Y KCG +
Sbjct: 177 ASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLV 236
Query: 86 GARKVFDEMPQRCIVSWNTIIGSYTTNGREQEAVALFINMLREGKTPYSEFTVSSVLCAC 145
GA++VFD+M + V+ ++ YT GR ++A+ LF++++ EG + F S VL AC
Sbjct: 237 GAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEG-VEWDSFVFSVVLKAC 295
Query: 146 AAKRDVFECKQLHVFALKAAMDRNVFVGTALLDVYAKCGLISDASRVFESMPERNEVTWS 205
A+ ++ KQ+H K ++ V VGT L+D Y KC A R F+ + E N+V+WS
Sbjct: 296 ASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWS 355
Query: 206 SMVAGFVQNELYEEALILFR-----RAQVLGLEYNQFTISSVICACAGLAALIQGKQVHA 260
++++G+ Q +EEA+ F+ A +L N FT +S+ AC+ LA G QVHA
Sbjct: 356 AIISGYCQMSQFEEAVKTFKSLRSKNASIL----NSFTYTSIFQACSVLADCNIGGQVHA 411
Query: 261 VLCKTGFGSNMFAASSLVDMYAKCGCVVDAYFVFSGIEEKNVVLWNTMISGFSRHARSVE 320
K + + S+L+ MY+KCGC+ DA VF ++ ++V W ISG + + + E
Sbjct: 412 DAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASE 471
Query: 321 VMILFEKMQQAGLHPNEQTYISVLSACSHIGMVEKGKSYFDLMVKQHNVLPNVFHYSCMI 380
+ LFEKM G+ PN T+I+VL+ACSH G+VE+GK D M++++NV P + HY CMI
Sbjct: 472 ALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMI 531
Query: 381 DILGRAGLIHEAYDLILNMPFDATASMWGSLLASCRNYRNLELAEIAAKQLFGMEPDNAG 440
DI R+GL+ EA + NMPF+ A W L+ C ++NLEL EIA ++L ++P++
Sbjct: 532 DIYARSGLLDEALKFMKNMPFEPDAMSWKCFLSGCWTHKNLELGEIAGEELRQLDPEDTA 591
Query: 441 NHLLLSNIYAANRRWEEVARARKLIRDSEVKKEKSKSWVEIKGK--------RNHPRIAE 492
++L N+Y +WEE A KL+ + +KKE S SW++ KGK ++HP+ E
Sbjct: 592 GYVLPFNLYTWAGKWEEAAEMMKLMNERMLKKELSCSWIQEKGKIHRFIVGDKHHPQTQE 651
Query: 493 IYSKLEKLVEEMKKLGYKPETEHDLHDVEDSRKQELLIHHSEKLALTFGLMCL---CPGV 549
IY KL++ M E D+ + ++E L+ HSE+LA+ FGL+ + P
Sbjct: 652 IYEKLKEFDGFM---------EGDMFQCNMTERREQLLDHSERLAIAFGLISVHGNAPA- 701
Query: 550 PIRIMKNLRICGDCHSFMKFASRIAGRETIVRDLNRFHHFTNGSCSCWDFW 600
PI++ KNLR C DCH F K S + G E ++RD RFHHF G CSC D+W
Sbjct: 702 PIKVFKNLRACPDCHEFAKHVSLVTGHEIVIRDSRRFHHFKEGKCSCNDYW 752
Score = 163 bits (412), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 113/408 (27%), Positives = 200/408 (49%), Gaps = 8/408 (1%)
Query: 35 TLQATLQSCARERAPVRGKVCHAKIIGMGLNNDT-LTSNILINFYSKCGLISGARKVFDE 93
+ Q ++C R+ G++ H ++ MG+ N + L N ++ Y +C + A K+FDE
Sbjct: 85 SYQCLFEACRELRSLSHGRLLHDRM-RMGIENPSVLLQNCVLQMYCECRSLEDADKLFDE 143
Query: 94 MPQRCIVSWNTIIGSYTTNGREQEAVALFINMLREGKTPYSEFTVSSVLCACAAKRDVFE 153
M + VS T+I +Y G +AV LF ML G P S +++L + R +
Sbjct: 144 MSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSSM-YTTLLKSLVNPRALDF 202
Query: 154 CKQLHVFALKAAMDRNVFVGTALLDVYAKCGLISDASRVFESMPERNEVTWSSMVAGFVQ 213
+Q+H ++A + N + T ++++Y KCG + A RVF+ M + V + ++ G+ Q
Sbjct: 203 GRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQ 262
Query: 214 NELYEEALILFRRAQVLGLEYNQFTISSVICACAGLAALIQGKQVHAVLCKTGFGSNMFA 273
+AL LF G+E++ F S V+ ACA L L GKQ+HA + K G S +
Sbjct: 263 AGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSV 322
Query: 274 ASSLVDMYAKCGCVVDAYFVFSGIEEKNVVLWNTMISGFSRHARSVEVMILFEKMQQAGL 333
+ LVD Y KC A F I E N V W+ +ISG+ + ++ E + F+ ++
Sbjct: 323 GTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNA 382
Query: 334 HP-NEQTYISVLSACSHIGMVEKGKSYFDLMVKQHNVLPNVFHYSCMIDILGRAGLIHEA 392
N TY S+ ACS + G +K+ +++ + + S +I + + G + +A
Sbjct: 383 SILNSFTYTSIFQACSVLADCNIGGQVHADAIKR-SLIGSQYGESALITMYSKCGCLDDA 441
Query: 393 YDLILNMPFDATASMWGSLLASCRNYRNLELAEIAAKQLF--GMEPDN 438
++ +M + W + ++ Y N A +++ GM+P++
Sbjct: 442 NEVFESMD-NPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNS 488
>sp|Q5G1T1|PP272_ARATH Pentatricopeptide repeat-containing protein At3g49170,
chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2
SV=1
Length = 850
Score = 424 bits (1091), Expect = e-118, Method: Compositional matrix adjust.
Identities = 212/582 (36%), Positives = 344/582 (59%), Gaps = 18/582 (3%)
Query: 35 TLQATLQSCARERAPVRGKVCHAKIIGMGLNNDTLTSNILINFYSKC---GLISGARKVF 91
TL + +CA GK H+ I GL +D S L++ Y+KC G + RKVF
Sbjct: 271 TLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVECS--LVDMYAKCSADGSVDDCRKVF 328
Query: 92 DEMPQRCIVSWNTIIGSYTTN-GREQEAVALFINMLREGKTPYSEFTVSSVLCACAAKRD 150
D M ++SW +I Y N EA+ LF M+ +G + FT SS AC D
Sbjct: 329 DRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSD 388
Query: 151 VFECKQLHVFALKAAMDRNVFVGTALLDVYAKCGLISDASRVFESMPERNEVTWSSMVAG 210
KQ+ A K + N V +++ ++ K + DA R FES+ E+N V++++ + G
Sbjct: 389 PRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDG 448
Query: 211 FVQNELYEEALILFRRAQVLGLEYNQFTISSVICACAGLAALIQGKQVHAVLCKTGFGSN 270
+N +E+A L L + FT +S++ A + ++ +G+Q+H+ + K G N
Sbjct: 449 TCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCN 508
Query: 271 MFAASSLVDMYAKCGCVVDAYFVFSGIEEKNVVLWNTMISGFSRHARSVEVMILFEKMQQ 330
++L+ MY+KCG + A VF+ +E +NV+ W +MI+GF++H ++ V+ F +M +
Sbjct: 509 QPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIE 568
Query: 331 AGLHPNEQTYISVLSACSHIGMVEKGKSYFDLMVKQHNVLPNVFHYSCMIDILGRAGLIH 390
G+ PNE TY+++LSACSH+G+V +G +F+ M + H + P + HY+CM+D+L RAGL+
Sbjct: 569 EGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLT 628
Query: 391 EAYDLILNMPFDATASMWGSLLASCRNYRNLELAEIAAKQLFGMEPDNAGNHLLLSNIYA 450
+A++ I MPF A +W + L +CR + N EL ++AA+++ ++P+ ++ LSNIYA
Sbjct: 629 DAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYA 688
Query: 451 ANRRWEEVARARKLIRDSEVKKEKSKSWVEIK--------GKRNHPRIAEIYSKLEKLVE 502
+WEE R+ +++ + KE SW+E+ G HP +IY +L++L+
Sbjct: 689 CAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLIT 748
Query: 503 EMKKLGYKPETEHDLHDV----EDSRKQELLIHHSEKLALTFGLMCLCPGVPIRIMKNLR 558
E+K+ GY P+T+ LH + +++ K+ LL HSEK+A+ FGL+ P+R+ KNLR
Sbjct: 749 EIKRCGYVPDTDLVLHKLEEENDEAEKERLLYQHSEKIAVAFGLISTSKSRPVRVFKNLR 808
Query: 559 ICGDCHSFMKFASRIAGRETIVRDLNRFHHFTNGSCSCWDFW 600
+CGDCH+ MK+ S ++GRE ++RDLNRFHHF +G CSC D+W
Sbjct: 809 VCGDCHNAMKYISTVSGREIVLRDLNRFHHFKDGKCSCNDYW 850
Score = 169 bits (429), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 127/412 (30%), Positives = 210/412 (50%), Gaps = 20/412 (4%)
Query: 35 TLQATLQSCARERAPVRGKVCHAKIIGMGLNNDTLTSNILINFYSKCGLISGARKVFDEM 94
T + L+SC R R GK+ HA++I + D++ N LI+ YSK G + A VF+ M
Sbjct: 64 TFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETM 123
Query: 95 ---PQRCIVSWNTIIGSYTTNGREQEAVALFINMLREGKTPYSEFTVSSVLCACAAKRDV 151
+R +VSW+ ++ Y NGRE +A+ +F+ L G P +++ ++V+ AC+ V
Sbjct: 124 RRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVP-NDYCYTAVIRACSNSDFV 182
Query: 152 FECKQLHVFALKAA-MDRNVFVGTALLDVYAKC-GLISDASRVFESMPERNEVTWSSMVA 209
+ F +K + +V VG +L+D++ K +A +VF+ M E N VTW+ M+
Sbjct: 183 GVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMIT 242
Query: 210 GFVQNELYEEALILFRRAQVLGLEYNQFTISSVICACAGLAALIQGKQVHAVLCKTGFGS 269
+Q EA+ F + G E ++FT+SSV ACA L L GKQ+H+ ++G
Sbjct: 243 RCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVD 302
Query: 270 NMFAASSLVDMYAKC---GCVVDAYFVFSGIEEKNVVLWNTMISGFSRHAR-SVEVMILF 325
++ SLVDMYAKC G V D VF +E+ +V+ W +I+G+ ++ + E + LF
Sbjct: 303 DV--ECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLF 360
Query: 326 EKM-QQAGLHPNEQTYISVLSACSHIGMVEKGKSYFDLMVKQHNVLPNVFHYSCMIDILG 384
+M Q + PN T+ S AC ++ GK K+ + N + +I +
Sbjct: 361 SEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKR-GLASNSSVANSVISMFV 419
Query: 385 RAGLIHEAYDLILNMPFDATASMWGSLLASCRNYRNLE-----LAEIAAKQL 431
++ + +A ++ S L +CRN N E L+EI ++L
Sbjct: 420 KSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNL-NFEQAFKLLSEITEREL 470
Score = 101 bits (251), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/260 (30%), Positives = 129/260 (49%), Gaps = 5/260 (1%)
Query: 103 NTIIGSYTTNGREQEAVALFINMLREGKTPYSEFTVSSVLCACAAKRDVFECKQLHVFAL 162
+ +I + G + AV+ M R+G P T SS+L +C RD K +H +
Sbjct: 30 DRLILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLI 89
Query: 163 KAAMDRNVFVGTALLDVYAKCGLISDASRVFESM---PERNEVTWSSMVAGFVQNELYEE 219
+ ++ + + +L+ +Y+K G + A VFE+M +R+ V+WS+M+A + N +
Sbjct: 90 EFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELD 149
Query: 220 ALILFRRAQVLGLEYNQFTISSVICACAGLAALIQGKQVHAVLCKTG-FGSNMFAASSLV 278
A+ +F LGL N + ++VI AC+ + G+ L KTG F S++ SL+
Sbjct: 150 AIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLI 209
Query: 279 DMYAKC-GCVVDAYFVFSGIEEKNVVLWNTMISGFSRHARSVEVMILFEKMQQAGLHPNE 337
DM+ K +AY VF + E NVV W MI+ + E + F M +G ++
Sbjct: 210 DMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDK 269
Query: 338 QTYISVLSACSHIGMVEKGK 357
T SV SAC+ + + GK
Sbjct: 270 FTLSSVFSACAELENLSLGK 289
>sp|Q9S7F4|PP206_ARATH Putative pentatricopeptide repeat-containing protein At2g01510
OS=Arabidopsis thaliana GN=PCMP-H36 PE=3 SV=1
Length = 825
Score = 423 bits (1088), Expect = e-117, Method: Compositional matrix adjust.
Identities = 218/558 (39%), Positives = 331/558 (59%), Gaps = 10/558 (1%)
Query: 52 GKVCHAKIIGMGLNNDTLTSNILINFYSKCGLISGARKVFDEMPQRCIVSWNTIIGSYTT 111
G+ HA + G + D N +++FYSK + R +FDEMP+ VS+N +I SY+
Sbjct: 269 GQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQ 328
Query: 112 NGREQEAVALFINMLREGKTPYSEFTVSSVLCACAAKRDVFECKQLHVFALKAAMDRNVF 171
+ + ++ F M G F +++L A + +QLH AL A D +
Sbjct: 329 ADQYEASLHFFREMQCMG-FDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILH 387
Query: 172 VGTALLDVYAKCGLISDASRVFESMPERNEVTWSSMVAGFVQNELYEEALILFRRAQVLG 231
VG +L+D+YAKC + +A +F+S+P+R V+W+++++G+VQ L+ L LF + +
Sbjct: 388 VGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSN 447
Query: 232 LEYNQFTISSVICACAGLAALIQGKQVHAVLCKTGFGSNMFAASSLVDMYAKCGCVVDAY 291
L +Q T ++V+ A A A+L+ GKQ+HA + ++G N+F+ S LVDMYAKCG + DA
Sbjct: 448 LRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAV 507
Query: 292 FVFSGIEEKNVVLWNTMISGFSRHARSVEVMILFEKMQQAGLHPNEQTYISVLSACSHIG 351
VF + ++N V WN +IS + + + F KM ++GL P+ + + VL+ACSH G
Sbjct: 508 QVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCG 567
Query: 352 MVEKGKSYFDLMVKQHNVLPNVFHYSCMIDILGRAGLIHEAYDLILNMPFDATASMWGSL 411
VE+G YF M + + P HY+CM+D+LGR G EA L+ MPF+ MW S+
Sbjct: 568 FVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSV 627
Query: 412 LASCRNYRNLELAEIAAKQLFGMEP-DNAGNHLLLSNIYAANRRWEEVARARKLIRDSEV 470
L +CR ++N LAE AA++LF ME +A ++ +SNIYAA WE+V +K +R+ +
Sbjct: 628 LNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGI 687
Query: 471 KKEKSKSWVEIKGK--------RNHPRIAEIYSKLEKLVEEMKKLGYKPETEHDLHDVED 522
KK + SWVE+ K + HP EI K+ +L E+++ GYKP+T + DV++
Sbjct: 688 KKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELTAEIEREGYKPDTSSVVQDVDE 747
Query: 523 SRKQELLIHHSEKLALTFGLMCLCPGVPIRIMKNLRICGDCHSFMKFASRIAGRETIVRD 582
K E L +HSE+LA+ F L+ G PI +MKNLR C DCH+ +K S+I RE VRD
Sbjct: 748 QMKIESLKYHSERLAVAFALISTPEGCPIVVMKNLRACRDCHAAIKLISKIVKREITVRD 807
Query: 583 LNRFHHFTNGSCSCWDFW 600
+RFHHF+ G CSC D+W
Sbjct: 808 TSRFHHFSEGVCSCGDYW 825
Score = 188 bits (477), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 113/391 (28%), Positives = 205/391 (52%), Gaps = 8/391 (2%)
Query: 52 GKVCHAKIIGMGLNNDTL--TSNILINFYSKCGLISGARKVFDEMPQRCIVSWNTIIGSY 109
G+V HA + +G + + SN+L+ Y + + A +F+E+P++ V++NT+I Y
Sbjct: 167 GQV-HAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGY 225
Query: 110 TTNGREQEAVALFINMLREGKTPYSEFTVSSVLCACAAKRDVFECKQLHVFALKAAMDRN 169
+G E++ LF+ M + G P S+FT S VL A D +QLH ++ R+
Sbjct: 226 EKDGLYTESIHLFLKMRQSGHQP-SDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRD 284
Query: 170 VFVGTALLDVYAKCGLISDASRVFESMPERNEVTWSSMVAGFVQNELYEEALILFRRAQV 229
VG +LD Y+K + + +F+ MPE + V+++ +++ + Q + YE +L FR Q
Sbjct: 285 ASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQC 344
Query: 230 LGLEYNQFTISSVICACAGLAALIQGKQVHAVLCKTGFGSNMFAASSLVDMYAKCGCVVD 289
+G + F ++++ A L++L G+Q+H S + +SLVDMYAKC +
Sbjct: 345 MGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEE 404
Query: 290 AYFVFSGIEEKNVVLWNTMISGFSRHARSVEVMILFEKMQQAGLHPNEQTYISVLSACSH 349
A +F + ++ V W +ISG+ + + LF KM+ + L ++ T+ +VL A +
Sbjct: 405 AELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASAS 464
Query: 350 IGMVEKGKSYFDLMVKQHNVLPNVFHYSCMIDILGRAGLIHEAYDLILNMPFDATASMWG 409
+ GK +++ N L NVF S ++D+ + G I +A + MP D A W
Sbjct: 465 FASLLLGKQLHAFIIRSGN-LENVFSGSGLVDMYAKCGSIKDAVQVFEEMP-DRNAVSWN 522
Query: 410 SLLASCRNYRNLELAEIAAKQLF--GMEPDN 438
+L+++ + + E A A ++ G++PD+
Sbjct: 523 ALISAHADNGDGEAAIGAFAKMIESGLQPDS 553
Score = 156 bits (394), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 102/370 (27%), Positives = 188/370 (50%), Gaps = 12/370 (3%)
Query: 51 RGKVCHA-KIIGMGLNNDTLTSNILINFYSKCGLISGARKVFDEMPQRCIVSWNTIIGSY 109
RG+V A K+ + +T+++N +I+ + K G +S AR +FD MP R +V+W ++G Y
Sbjct: 61 RGQVSAARKVYDEMPHKNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWY 120
Query: 110 TTNGREQEAVALFINMLREGK-TPYSEFTVSSVLCACAAKRDVFECKQLHVFALKAAMDR 168
N EA LF M R T T +++L C Q+H FA+K D
Sbjct: 121 ARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDT 180
Query: 169 NVF--VGTALLDVYAKCGLISDASRVFESMPERNEVTWSSMVAGFVQNELYEEALILFRR 226
N F V LL Y + + A +FE +PE++ VT+++++ G+ ++ LY E++ LF +
Sbjct: 181 NPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLK 240
Query: 227 AQVLGLEYNQFTISSVICACAGLAALIQGKQVHAVLCKTGFGSNMFAASSLVDMYAKCGC 286
+ G + + FT S V+ A GL G+Q+HA+ TGF + + ++D Y+K
Sbjct: 241 MRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDR 300
Query: 287 VVDAYFVFSGIEEKNVVLWNTMISGFSRHARSVEVMILFEKMQQAGLHPNEQTYISVLSA 346
V++ +F + E + V +N +IS +S+ + + F +MQ G + ++LS
Sbjct: 301 VLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSI 360
Query: 347 CSHIGMVEKGKSYF--DLMVKQHNVLPNVFHY-SCMIDILGRAGLIHEAYDLILNMPFDA 403
+++ ++ G+ L+ ++L H + ++D+ + + EA + ++P
Sbjct: 361 AANLSSLQMGRQLHCQALLATADSIL----HVGNSLVDMYAKCEMFEEAELIFKSLPQRT 416
Query: 404 TASMWGSLLA 413
T S W +L++
Sbjct: 417 TVS-WTALIS 425
Score = 82.4 bits (202), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 91/182 (50%), Gaps = 13/182 (7%)
Query: 34 STLQATLQSCARERAPVRGKVCHAKIIGMGLNNDTLTSNILINFYSKCGLISGARKVFDE 93
ST L++ A + + GK HA II G + + + L++ Y+KCG I A +VF+E
Sbjct: 453 STFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEE 512
Query: 94 MPQRCIVSWNTIIGSYTTNGREQEAVALFINMLREGKTPYSEFTVSSVLCACA------A 147
MP R VSWN +I ++ NG + A+ F M+ G P S ++ VL AC+
Sbjct: 513 MPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDS-VSILGVLTACSHCGFVEQ 571
Query: 148 KRDVFECKQLHVFALKAAMDRNVFVGTALLDVYAKCGLISDASRVFESMP-ERNEVTWSS 206
+ F+ ++ + +LD+ + G ++A ++ + MP E +E+ WSS
Sbjct: 572 GTEYFQAMS-PIYGITPKKKHYA----CMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSS 626
Query: 207 MV 208
++
Sbjct: 627 VL 628
Score = 38.1 bits (87), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 39/79 (49%)
Query: 250 AALIQGKQVHAVLCKTGFGSNMFAASSLVDMYAKCGCVVDAYFVFSGIEEKNVVLWNTMI 309
A + ++V A + KTGF ++ ++ +V+ + G V A V+ + KN V NTMI
Sbjct: 27 ATFLDTRRVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMI 86
Query: 310 SGFSRHARSVEVMILFEKM 328
SG + LF+ M
Sbjct: 87 SGHVKTGDVSSARDLFDAM 105
>sp|Q9FRI5|PPR57_ARATH Pentatricopeptide repeat-containing protein At1g25360
OS=Arabidopsis thaliana GN=PCMP-H74 PE=2 SV=1
Length = 790
Score = 420 bits (1079), Expect = e-116, Method: Compositional matrix adjust.
Identities = 233/621 (37%), Positives = 343/621 (55%), Gaps = 78/621 (12%)
Query: 56 HAKIIGMGLNNDTLTSNILINFYSKCG----LISGARKVFDEMPQRCIVSWNTIIGSYTT 111
HA + G T SN L++ YSKC L+ ARKVFDE+ ++ SW T++ Y
Sbjct: 172 HAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVK 231
Query: 112 NGR--------------------------------EQEAVALFINMLREGKTPYSEFTVS 139
NG QEA+ + M+ G EFT
Sbjct: 232 NGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSG-IELDEFTYP 290
Query: 140 SVLCACAAKRDVFECKQLHVFALKAAMDRNVFVGTALLDVYAKCGLISDASRVFESMPER 199
SV+ ACA + KQ+H + L+ D + +L+ +Y KCG +A +FE MP +
Sbjct: 291 SVIRACATAGLLQLGKQVHAYVLRRE-DFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAK 349
Query: 200 NEVTWSSMVAGFV-------------------------------QNELYEEALILFRRAQ 228
+ V+W+++++G+V +N EE L LF +
Sbjct: 350 DLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMK 409
Query: 229 VLGLEYNQFTISSVICACAGLAALIQGKQVHAVLCKTGFGSNMFAASSLVDMYAKCGCVV 288
G E + S I +CA L A G+Q HA L K GF S++ A ++L+ MYAKCG V
Sbjct: 410 REGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVE 469
Query: 289 DAYFVFSGIEEKNVVLWNTMISGFSRHARSVEVMILFEKMQQAGLHPNEQTYISVLSACS 348
+A VF + + V WN +I+ +H E + ++E+M + G+ P+ T ++VL+ACS
Sbjct: 470 EARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACS 529
Query: 349 HIGMVEKGKSYFDLMVKQHNVLPNVFHYSCMIDILGRAGLIHEAYDLILNMPFDATASMW 408
H G+V++G+ YFD M + + P HY+ +ID+L R+G +A +I ++PF TA +W
Sbjct: 530 HAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIW 589
Query: 409 GSLLASCRNYRNLELAEIAAKQLFGMEPDNAGNHLLLSNIYAANRRWEEVARARKLIRDS 468
+LL+ CR + N+EL IAA +LFG+ P++ G ++LLSN++AA +WEEVAR RKL+RD
Sbjct: 590 EALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDR 649
Query: 469 EVKKEKSKSWVEIKGK--------RNHPRIAEIYSKLEKLVEEMKKLGYKPETEHDLHDV 520
VKKE + SW+E++ + +HP +Y L+ L +EM++LGY P+T LHDV
Sbjct: 650 GVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYIYLQDLGKEMRRLGYVPDTSFVLHDV 709
Query: 521 E-DSRKQELLIHHSEKLALTFGLMCLCPGVPIRIMKNLRICGDCHSFMKFASRIAGRETI 579
E D K+++L HSEK+A+ FGLM L PG IRI KNLR CGDCH+F +F S + R+ I
Sbjct: 710 ESDGHKEDMLTTHSEKIAVAFGLMKLPPGTTIRIFKNLRTCGDCHNFFRFLSWVVQRDII 769
Query: 580 VRDLNRFHHFTNGSCSCWDFW 600
+RD RFHHF NG CSC +FW
Sbjct: 770 LRDRKRFHHFRNGECSCGNFW 790
Score = 144 bits (363), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 120/443 (27%), Positives = 197/443 (44%), Gaps = 76/443 (17%)
Query: 67 DTLTSNILINFYSKCGLISGARKVFDEMP--QRCIVSWNTIIGSYTTNGREQEAVALFIN 124
D + +++ Y G I+ AR VF++ P R V +N +I ++ N A+ LF
Sbjct: 79 DKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCK 138
Query: 125 MLREGKTPYSEFTVSSVLCACA-AKRDVFECKQLHVFALKAAMDRNVFVGTALLDVYAKC 183
M EG P FT +SVL A D +C Q H ALK+ V AL+ VY+KC
Sbjct: 139 MKHEGFKP-DNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKC 197
Query: 184 G----LISDASRVFESMPERNEVTWSSMVAGFVQN------------------------- 214
L+ A +VF+ + E++E +W++M+ G+V+N
Sbjct: 198 ASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAM 257
Query: 215 -------ELYEEALILFRRAQVLGLEYNQFTISSVICACAGLAALIQGKQVHAVLCKTGF 267
Y+EAL + RR G+E ++FT SVI ACA L GKQVHA + +
Sbjct: 258 ISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRRED 317
Query: 268 GSNMFAASSLVDMYAKC-------------------------------GCVVDAYFVFSG 296
S F +SLV +Y KC G + +A +F
Sbjct: 318 FSFHF-DNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKE 376
Query: 297 IEEKNVVLWNTMISGFSRHARSVEVMILFEKMQQAGLHPNEQTYISVLSACSHIGMVEKG 356
++EKN++ W MISG + + E + LF M++ G P + + + +C+ +G G
Sbjct: 377 MKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNG 436
Query: 357 KSYFDLMVKQHNVLPNVFHYSCMIDILGRAGLIHEAYDLILNMPFDATASMWGSLLASCR 416
+ Y ++K ++ + +I + + G++ EA + MP + S W +L+A+
Sbjct: 437 QQYHAQLLKI-GFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVS-WNALIAALG 494
Query: 417 NY-RNLELAEIAAKQL-FGMEPD 437
+ E ++ + L G+ PD
Sbjct: 495 QHGHGAEAVDVYEEMLKKGIRPD 517
Score = 114 bits (286), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/349 (25%), Positives = 157/349 (44%), Gaps = 47/349 (13%)
Query: 35 TLQATLQSCARERAPVRGKVCHAKIIGMGLNNDTLT---SNILINFYSKCGLISGARKVF 91
T + +++CA GK HA + L + + N L++ Y KCG AR +F
Sbjct: 288 TYPSVIRACATAGLLQLGKQVHAYV----LRREDFSFHFDNSLVSLYYKCGKFDEARAIF 343
Query: 92 DEMPQRCIVSWNTIIGSYTT-------------------------------NGREQEAVA 120
++MP + +VSWN ++ Y + NG +E +
Sbjct: 344 EKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLK 403
Query: 121 LFINMLREGKTPYSEFTVSSVLCACAAKRDVFECKQLHVFALKAAMDRNVFVGTALLDVY 180
LF M REG P ++ S + +CA +Q H LK D ++ G AL+ +Y
Sbjct: 404 LFSCMKREGFEP-CDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMY 462
Query: 181 AKCGLISDASRVFESMPERNEVTWSSMVAGFVQNELYEEALILFRRAQVLGLEYNQFTIS 240
AKCG++ +A +VF +MP + V+W++++A Q+ EA+ ++ G+ ++ T+
Sbjct: 463 AKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLL 522
Query: 241 SVICACAGLAALIQGKQVH---AVLCKTGFGSNMFAASSLVDMYAKCGCVVDAYFVFSGI 297
+V+ AC+ + QG++ + + G++ +A L+D+ + G DA V +
Sbjct: 523 TVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYA--RLIDLLCRSGKFSDAESVIESL 580
Query: 298 EEKNVV-LWNTMISGFSRHARSVEVMILFEKMQQAGLHPNEQTYISVLS 345
K +W ++SG H +I +K+ GL P +LS
Sbjct: 581 PFKPTAEIWEALLSGCRVHGNMELGIIAADKL--FGLIPEHDGTYMLLS 627
Score = 72.8 bits (177), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 140/330 (42%), Gaps = 81/330 (24%)
Query: 176 LLDVYAK-------------------------------CGLISDASRVFESMP--ERNEV 202
L+DVY K G I+ A VFE P R+ V
Sbjct: 55 LIDVYCKSSELNYARQLFDEISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTV 114
Query: 203 TWSSMVAGFVQNELYEEALILFRRAQVLGLEYNQFTISSVICACAGLAALI----QGKQV 258
+++M+ GF N A+ LF + + G + + FT +SV+ AGLA + Q Q
Sbjct: 115 MYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVL---AGLALVADDEKQCVQF 171
Query: 259 HAVLCKTGFGSNMFAASSLVDMYAKC------------------------------GCVV 288
HA K+G G +++LV +Y+KC G V
Sbjct: 172 HAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVK 231
Query: 289 DAYF-----VFSGIEEK-NVVLWNTMISGFSRHARSVEVMILFEKMQQAGLHPNEQTYIS 342
+ YF + G+++ +V +N MISG+ E + + +M +G+ +E TY S
Sbjct: 232 NGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPS 291
Query: 343 VLSACSHIGMVEKGKSYFDLMVKQHNVLPNVFHY-SCMIDILGRAGLIHEAYDLILNMPF 401
V+ AC+ G+++ GK ++++ + FH+ + ++ + + G EA + MP
Sbjct: 292 VIRACATAGLLQLGKQVHAYVLRREDF---SFHFDNSLVSLYYKCGKFDEARAIFEKMPA 348
Query: 402 DATASMWGSLLASCRNYRNLELAEIAAKQL 431
S W +LL+ + ++ A++ K++
Sbjct: 349 KDLVS-WNALLSGYVSSGHIGEAKLIFKEM 377
Score = 40.4 bits (93), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 59/154 (38%), Gaps = 33/154 (21%)
Query: 235 NQFTISSVICACAGLAALIQGKQVHAVLCKTGFGSNMFAASSLVDMYAKCGCVVDAYFVF 294
N++ + +C +L + VH + GF + L+D+Y K + A +F
Sbjct: 13 NRYAANLRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLF 72
Query: 295 SGIEE---------------------------------KNVVLWNTMISGFSRHARSVEV 321
I E ++ V++N MI+GFS +
Sbjct: 73 DEISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSA 132
Query: 322 MILFEKMQQAGLHPNEQTYISVLSACSHIGMVEK 355
+ LF KM+ G P+ T+ SVL+ + + EK
Sbjct: 133 INLFCKMKHEGFKPDNFTFASVLAGLALVADDEK 166
>sp|O23266|PP308_ARATH Pentatricopeptide repeat-containing protein At4g14050,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H13 PE=2
SV=3
Length = 612
Score = 419 bits (1078), Expect = e-116, Method: Compositional matrix adjust.
Identities = 223/603 (36%), Positives = 353/603 (58%), Gaps = 42/603 (6%)
Query: 40 LQSCARERAPVRGKVCHAKIIGMGLNNDTLTSNILINFYSKCGLISGARKVFDEMPQRCI 99
LQ CAR R K HA I+ +G+ +N L+N Y KCG S A +VFDEMP R
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDH 69
Query: 100 VSWNTIIGSYTTNGREQEAVALFINMLREGKTPYSEFTVSSVLCACAAKRDVFECKQLHV 159
++W +++ + + +++F ++ +F S+++ ACA + +Q+H
Sbjct: 70 IAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHC 129
Query: 160 FALKAAMDRNVFVGTALLDVYAKCGLISDASRVFESMPERNEVTWSSMVAGFVQNELYEE 219
+ + + V ++L+D+YAKCGL++ A VF+S+ +N ++W++MV+G+ ++ EE
Sbjct: 130 HFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEE 189
Query: 220 ALILFRRAQVL-----------------GLE-YNQFT--------------ISSVICACA 247
AL LFR V GLE ++ FT +SS++ ACA
Sbjct: 190 ALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACA 249
Query: 248 GLAALIQGKQVHAVLCKTGFGSNMFAASSLVDMYAKCGCVVDAYFVFSGIEEKNVVLWNT 307
LAA I G+QVH ++ GF S +F +++L+DMYAKC V+ A +FS + ++VV W +
Sbjct: 250 NLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTS 309
Query: 308 MISGFSRHARSVEVMILFEKMQQAGLHPNEQTYISVLSACSHIGMVEKGKSYFDLMVKQH 367
+I G ++H ++ + + L++ M G+ PNE T++ ++ ACSH+G VEKG+ F M K +
Sbjct: 310 LIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDY 369
Query: 368 NVLPNVFHYSCMIDILGRAGLIHEAYDLILNMPFDATASMWGSLLASC-RNYRNLELAEI 426
+ P++ HY+C++D+LGR+GL+ EA +LI MPF W +LL++C R R I
Sbjct: 370 GIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRI 429
Query: 427 AAKQLFGMEPDNAGNHLLLSNIYAANRRWEEVARARKLIRDSEVKKEKSKSWVEIK---- 482
A + + + ++LLSNIYA+ W +V+ AR+ + + EV+K+ S VE++
Sbjct: 430 ADHLVSSFKLKDPSTYILLSNIYASASLWGKVSEARRKLGEMEVRKDPGHSSVEVRKETE 489
Query: 483 ----GKRNHPRIAEIYSKLEKLVEEMK-KLGYKPETEHDLHDVEDSRKQELLIHHSEKLA 537
G+ +HP +I+ L+KL EEM+ + GY P+T LHD+++ K++LL HSE+ A
Sbjct: 490 VFYAGETSHPLKEDIFRLLKKLEEEMRIRNGYVPDTSWILHDMDEQEKEKLLFWHSERSA 549
Query: 538 LTFGLMCLCPGVPIRIMKNLRICGDCHSFMKFASRIAGRETIVRDLNRFHHFTNGSCSCW 597
+ +GL+ PG PIRI+KNLR+CGDCH +K S I RE IVRD R+HHF G CSC
Sbjct: 550 VAYGLLKAVPGTPIRIVKNLRVCGDCHVVLKHISEITEREIIVRDATRYHHFKGGKCSCN 609
Query: 598 DFW 600
DFW
Sbjct: 610 DFW 612
Score = 87.0 bits (214), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 97/183 (53%), Gaps = 13/183 (7%)
Query: 35 TLQATLQSCARERAPVRGKVCHAKIIGMGLNNDTLTSNILINFYSKCGLISGARKVFDEM 94
L + + +CA A + G+ H +I +G ++ SN LI+ Y+KC + A+ +F M
Sbjct: 240 VLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRM 299
Query: 95 PQRCIVSWNTIIGSYTTNGREQEAVALFINMLREGKTPYSEFTVSSVLCACA------AK 148
R +VSW ++I +G+ ++A+AL+ +M+ G P +E T ++ AC+
Sbjct: 300 RHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKP-NEVTFVGLIYACSHVGFVEKG 358
Query: 149 RDVFECKQLHVFALKAAMDRNVFVGTALLDVYAKCGLISDASRVFESMP-ERNEVTWSSM 207
R++F+ + ++ ++ T LLD+ + GL+ +A + +MP +E TW+++
Sbjct: 359 RELFQ-SMTKDYGIRPSLQHY----TCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAAL 413
Query: 208 VAG 210
++
Sbjct: 414 LSA 416
>sp|Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis
thaliana GN=PCMP-H42 PE=2 SV=2
Length = 1064
Score = 418 bits (1075), Expect = e-116, Method: Compositional matrix adjust.
Identities = 207/574 (36%), Positives = 338/574 (58%), Gaps = 9/574 (1%)
Query: 35 TLQATLQSCARERAPVRGKVCHAKIIGMGLNNDTLTSNILINFYSKCGLISGARKVFDEM 94
T + L++C R G+ H++II + ++LI+ Y+K G + A +
Sbjct: 492 TYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRF 551
Query: 95 PQRCIVSWNTIIGSYTTNGREQEAVALFINMLREGKTPYSEFTVSSVLCACAAKRDVFEC 154
+ +VSW T+I YT + +A+ F ML G E +++ + ACA + + E
Sbjct: 552 AGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRS-DEVGLTNAVSACAGLQALKEG 610
Query: 155 KQLHVFALKAAMDRNVFVGTALLDVYAKCGLISDASRVFESMPERNEVTWSSMVAGFVQN 214
+Q+H A + ++ AL+ +Y++CG I ++ FE + + W+++V+GF Q+
Sbjct: 611 QQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQS 670
Query: 215 ELYEEALILFRRAQVLGLEYNQFTISSVICACAGLAALIQGKQVHAVLCKTGFGSNMFAA 274
EEAL +F R G++ N FT S + A + A + QGKQVHAV+ KTG+ S
Sbjct: 671 GNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVC 730
Query: 275 SSLVDMYAKCGCVVDAYFVFSGIEEKNVVLWNTMISGFSRHARSVEVMILFEKMQQAGLH 334
++L+ MYAKCG + DA F + KN V WN +I+ +S+H E + F++M + +
Sbjct: 731 NALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVR 790
Query: 335 PNEQTYISVLSACSHIGMVEKGKSYFDLMVKQHNVLPNVFHYSCMIDILGRAGLIHEAYD 394
PN T + VLSACSHIG+V+KG +YF+ M ++ + P HY C++D+L RAGL+ A +
Sbjct: 791 PNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKE 850
Query: 395 LILNMPFDATASMWGSLLASCRNYRNLELAEIAAKQLFGMEPDNAGNHLLLSNIYAANRR 454
I MP A +W +LL++C ++N+E+ E AA L +EP+++ ++LLSN+YA +++
Sbjct: 851 FIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKK 910
Query: 455 WEEVARARKLIRDSEVKKEKSKSWVEIK--------GKRNHPRIAEIYSKLEKLVEEMKK 506
W+ R+ +++ VKKE +SW+E+K G +NHP EI+ + L + +
Sbjct: 911 WDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASE 970
Query: 507 LGYKPETEHDLHDVEDSRKQELLIHHSEKLALTFGLMCLCPGVPIRIMKNLRICGDCHSF 566
+GY + L++++ +K ++ HSEKLA++FGL+ L VPI +MKNLR+C DCH++
Sbjct: 971 IGYVQDCFSLLNELQHEQKDPIIFIHSEKLAISFGLLSLPATVPINVMKNLRVCNDCHAW 1030
Query: 567 MKFASRIAGRETIVRDLNRFHHFTNGSCSCWDFW 600
+KF S+++ RE IVRD RFHHF G+CSC D+W
Sbjct: 1031 IKFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1064
Score = 198 bits (503), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 125/429 (29%), Positives = 213/429 (49%), Gaps = 15/429 (3%)
Query: 14 KSFSSSAIASASANANATELSTLQATLQSCARERAPV-RGKVCHAKIIGMGLNNDTLTSN 72
+SF I S TL+ L+ C + + G+ H++I+ +GL+++ S
Sbjct: 65 ESFQEKRIDSVENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSE 124
Query: 73 ILINFYSKCGLISGARKVFDEMPQRCIVSWNTIIGSYTTNGREQEAVALFINMLREGKTP 132
L +FY G + GA KVFDEMP+R I +WN +I + E LF+ M+ E TP
Sbjct: 125 KLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTP 184
Query: 133 YSEFTVSSVLCACAAKRDVFEC-KQLHVFALKAAMDRNVFVGTALLDVYAKCGLISDASR 191
+E T S VL AC F+ +Q+H L + + V L+D+Y++ G + A R
Sbjct: 185 -NEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARR 243
Query: 192 VFESMPERNEVTWSSMVAGFVQNELYEEALILFRRAQVLGLEYNQFTISSVICACAGLAA 251
VF+ + ++ +W +M++G +NE EA+ LF VLG+ + SSV+ AC + +
Sbjct: 244 VFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIES 303
Query: 252 LIQGKQVHAVLCKTGFGSNMFAASSLVDMYAKCGCVVDAYFVFSGIEEKNVVLWNTMISG 311
L G+Q+H ++ K GF S+ + ++LV +Y G ++ A +FS + +++ V +NT+I+G
Sbjct: 304 LEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLING 363
Query: 312 FSRHARSVEVMILFEKMQQAGLHPNEQTYISVLSACSHIGMVEKGKSYFDLMVKQHNVLP 371
S+ + M LF++M GL P+ T S++ ACS G + +G+ K
Sbjct: 364 LSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASN 423
Query: 372 NVFHYSCMIDILGRAGLIHEAYDLILNMPFDATASMWGSLLA----------SCRNYRNL 421
N ++++ + I A D L + +W +L S R +R +
Sbjct: 424 NKIE-GALLNLYAKCADIETALDYFLETEVENVV-LWNVMLVAYGLLDDLRNSFRIFRQM 481
Query: 422 ELAEIAAKQ 430
++ EI Q
Sbjct: 482 QIEEIVPNQ 490
Score = 174 bits (440), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 93/332 (28%), Positives = 175/332 (52%), Gaps = 1/332 (0%)
Query: 34 STLQATLQSCARERAPVRGKVCHAKIIGMGLNNDTLTSNILINFYSKCGLISGARKVFDE 93
+TL + + +C+ + RG+ HA +G ++ L+N Y+KC I A F E
Sbjct: 390 NTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLE 449
Query: 94 MPQRCIVSWNTIIGSYTTNGREQEAVALFINMLREGKTPYSEFTVSSVLCACAAKRDVFE 153
+V WN ++ +Y + + +F M E P +++T S+L C D+
Sbjct: 450 TEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVP-NQYTYPSILKTCIRLGDLEL 508
Query: 154 CKQLHVFALKAAMDRNVFVGTALLDVYAKCGLISDASRVFESMPERNEVTWSSMVAGFVQ 213
+Q+H +K N +V + L+D+YAK G + A + ++ V+W++M+AG+ Q
Sbjct: 509 GEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQ 568
Query: 214 NELYEEALILFRRAQVLGLEYNQFTISSVICACAGLAALIQGKQVHAVLCKTGFGSNMFA 273
++AL FR+ G+ ++ +++ + ACAGL AL +G+Q+HA C +GF S++
Sbjct: 569 YNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPF 628
Query: 274 ASSLVDMYAKCGCVVDAYFVFSGIEEKNVVLWNTMISGFSRHARSVEVMILFEKMQQAGL 333
++LV +Y++CG + ++Y F E + + WN ++SGF + + E + +F +M + G+
Sbjct: 629 QNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGI 688
Query: 334 HPNEQTYISVLSACSHIGMVEKGKSYFDLMVK 365
N T+ S + A S +++GK ++ K
Sbjct: 689 DNNNFTFGSAVKAASETANMKQGKQVHAVITK 720
>sp|O81767|PP348_ARATH Pentatricopeptide repeat-containing protein At4g33990
OS=Arabidopsis thaliana GN=EMB2758 PE=3 SV=2
Length = 823
Score = 417 bits (1071), Expect = e-115, Method: Compositional matrix adjust.
Identities = 219/599 (36%), Positives = 345/599 (57%), Gaps = 11/599 (1%)
Query: 12 YYKSFSSSAIASASANANATELSTLQATLQSCARERAPVRGKVCHAKIIGMGLNNDTLTS 71
Y +S ++ + S A + T+ + L +C RG H+ I GL ++ S
Sbjct: 226 YCQSGNAKEALTLSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVS 285
Query: 72 NILINFYSKCGLISGARKVFDEMPQRCIVSWNTIIGSYTTNGREQEAVALFINMLREGKT 131
N LI+ Y++ G + +KVFD M R ++SWN+II +Y N + A++LF M R +
Sbjct: 286 NKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEM-RLSRI 344
Query: 132 PYSEFTVSSVLCACAAKRDVFECKQLHVFAL-KAAMDRNVFVGTALLDVYAKCGLISDAS 190
T+ S+ + D+ C+ + F L K ++ +G A++ +YAK GL+ A
Sbjct: 345 QPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSAR 404
Query: 191 RVFESMPERNEVTWSSMVAGFVQNELYEEALILFRRAQVLG-LEYNQFTISSVICACAGL 249
VF +P + ++W+++++G+ QN EA+ ++ + G + NQ T SV+ AC+
Sbjct: 405 AVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQA 464
Query: 250 AALIQGKQVHAVLCKTGFGSNMFAASSLVDMYAKCGCVVDAYFVFSGIEEKNVVLWNTMI 309
AL QG ++H L K G ++F +SL DMY KCG + DA +F I N V WNT+I
Sbjct: 465 GALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLI 524
Query: 310 SGFSRHARSVEVMILFEKMQQAGLHPNEQTYISVLSACSHIGMVEKGKSYFDLMVKQHNV 369
+ H + ++LF++M G+ P+ T++++LSACSH G+V++G+ F++M + +
Sbjct: 525 ACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGI 584
Query: 370 LPNVFHYSCMIDILGRAGLIHEAYDLILNMPFDATASMWGSLLASCRNYRNLELAEIAAK 429
P++ HY CM+D+ GRAG + A I +M AS+WG+LL++CR + N++L +IA++
Sbjct: 585 TPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASE 644
Query: 430 QLFGMEPDNAGNHLLLSNIYAANRRWEEVARARKLIRDSEVKKEKSKSWVEIK------- 482
LF +EP++ G H+LLSN+YA+ +WE V R + ++K S +E+
Sbjct: 645 HLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFY 704
Query: 483 -GKRNHPRIAEIYSKLEKLVEEMKKLGYKPETEHDLHDVEDSRKQELLIHHSEKLALTFG 541
G + HP E+Y +L L ++K +GY P+ L DVED K+ +L+ HSE+LA+ F
Sbjct: 705 TGNQTHPMYEEMYRELTALQAKLKMIGYVPDHRFVLQDVEDDEKEHILMSHSERLAIAFA 764
Query: 542 LMCLCPGVPIRIMKNLRICGDCHSFMKFASRIAGRETIVRDLNRFHHFTNGSCSCWDFW 600
L+ IRI KNLR+CGDCHS KF S+I RE IVRD NRFHHF NG CSC D+W
Sbjct: 765 LIATPAKTTIRIFKNLRVCGDCHSVTKFISKITEREIIVRDSNRFHHFKNGVCSCGDYW 823
Score = 174 bits (440), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 115/416 (27%), Positives = 213/416 (51%), Gaps = 14/416 (3%)
Query: 35 TLQATLQSCARERAPVRGKVCHAKIIGMGLNNDTLTSNILINFYSKCGLISGARKVFDEM 94
T + L++C R + G H + G D + LI+ YS+ + AR +FDEM
Sbjct: 155 TFPSVLKAC---RTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEM 211
Query: 95 PQRCIVSWNTIIGSYTTNGREQEAVALFINMLREGKTPYSEFTVSSVLCACAAKRDVFEC 154
P R + SWN +I Y +G +EA+ L G TV S+L AC D
Sbjct: 212 PVRDMGSWNAMISGYCQSGNAKEALT-----LSNGLRAMDSVTVVSLLSACTEAGDFNRG 266
Query: 155 KQLHVFALKAAMDRNVFVGTALLDVYAKCGLISDASRVFESMPERNEVTWSSMVAGFVQN 214
+H +++K ++ +FV L+D+YA+ G + D +VF+ M R+ ++W+S++ + N
Sbjct: 267 VTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELN 326
Query: 215 ELYEEALILFRRAQVLGLEYNQFTISSVICACAGLAALIQGKQVHAVLCKTG-FGSNMFA 273
E A+ LF+ ++ ++ + T+ S+ + L + + V + G F ++
Sbjct: 327 EQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITI 386
Query: 274 ASSLVDMYAKCGCVVDAYFVFSGIEEKNVVLWNTMISGFSRHARSVEVMILFEKMQQAG- 332
+++V MYAK G V A VF+ + +V+ WNT+ISG++++ + E + ++ M++ G
Sbjct: 387 GNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGE 446
Query: 333 LHPNEQTYISVLSACSHIGMVEKGKSYFDLMVKQHNVLPNVFHYSCMIDILGRAGLIHEA 392
+ N+ T++SVL ACS G + +G ++K + + +VF + + D+ G+ G + +A
Sbjct: 447 IAANQGTWVSVLPACSQAGALRQGMKLHGRLLK-NGLYLDVFVVTSLADMYGKCGRLEDA 505
Query: 393 YDLILNMPFDATASMWGSLLASCRNYRNLELAEIAAKQLF--GMEPDNAGNHLLLS 446
L +P + W +L+A + + E A + K++ G++PD+ LLS
Sbjct: 506 LSLFYQIP-RVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLS 560
Score = 148 bits (373), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 100/401 (24%), Positives = 200/401 (49%), Gaps = 14/401 (3%)
Query: 15 SFSSSAIASASANANAT-ELSTLQATLQSCARERAPVRGKVCHAKIIGMGLNNDTLTSNI 73
S S++A+ N N + E+ + + C ++ K HA+++ + S
Sbjct: 35 SASANALQDCWKNGNESKEIDDVHTLFRYCTNLQS---AKCLHARLVVSKQIQNVCISAK 91
Query: 74 LINFYSKCGLISGARKVFDEMPQRCIVSWNTIIGSYTTNGREQEAVALF-INMLREGKTP 132
L+N Y G ++ AR FD + R + +WN +I Y G E + F + ML G TP
Sbjct: 92 LVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTP 151
Query: 133 YSEFTVSSVLCACAAKRDVFECKQLHVFALKAAMDRNVFVGTALLDVYAKCGLISDASRV 192
T SVL AC R V + ++H ALK +V+V +L+ +Y++ + +A +
Sbjct: 152 DYR-TFPSVLKAC---RTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARIL 207
Query: 193 FESMPERNEVTWSSMVAGFVQNELYEEALILFRRAQVLGLEYNQFTISSVICACAGLAAL 252
F+ MP R+ +W++M++G+ Q+ +EAL L + + + T+ S++ AC
Sbjct: 208 FDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAM----DSVTVVSLLSACTEAGDF 263
Query: 253 IQGKQVHAVLCKTGFGSNMFAASSLVDMYAKCGCVVDAYFVFSGIEEKNVVLWNTMISGF 312
+G +H+ K G S +F ++ L+D+YA+ G + D VF + ++++ WN++I +
Sbjct: 264 NRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAY 323
Query: 313 SRHARSVEVMILFEKMQQAGLHPNEQTYISVLSACSHIGMVEKGKSYFDLMVKQHNVLPN 372
+ + + + LF++M+ + + P+ T IS+ S S +G + +S +++ L +
Sbjct: 324 ELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLED 383
Query: 373 VFHYSCMIDILGRAGLIHEAYDLILNMPFDATASMWGSLLA 413
+ + ++ + + GL+ A + +P S W ++++
Sbjct: 384 ITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVIS-WNTIIS 423
>sp|Q9M4P3|PP316_ARATH Pentatricopeptide repeat-containing protein At4g16835,
mitochondrial OS=Arabidopsis thaliana GN=DYW10 PE=2 SV=3
Length = 656
Score = 416 bits (1070), Expect = e-115, Method: Compositional matrix adjust.
Identities = 219/543 (40%), Positives = 334/543 (61%), Gaps = 18/543 (3%)
Query: 67 DTLTSNILINFYSKCGLISGARKVFDEMPQRCIVSWNTIIGSYTTNGREQEAVALFINML 126
DT + NI+++ Y + A+ FD MP + SWNT+I Y G ++A LF +M+
Sbjct: 123 DTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSMM 182
Query: 127 REGKTPYSEFTVSSVLCACAAKRDVFECKQLHVFALKAAMDRNVFVGTALLDVYAKCGLI 186
+ + ++ + C K F K A R V TA++ Y K +
Sbjct: 183 EKNEVSWNAMISGYIECGDLEKASHF---------FKVAPVRGVVAWTAMITGYMKAKKV 233
Query: 187 SDASRVFESMP-ERNEVTWSSMVAGFVQNELYEEALILFRRAQVLGLEYNQFTISSVICA 245
A +F+ M +N VTW++M++G+V+N E+ L LFR G+ N +SS +
Sbjct: 234 ELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLG 293
Query: 246 CAGLAALIQGKQVHAVLCKTGFGSNMFAASSLVDMYAKCGCVVDAYFVFSGIEEKNVVLW 305
C+ L+AL G+Q+H ++ K+ +++ A +SL+ MY KCG + DA+ +F +++K+VV W
Sbjct: 294 CSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAW 353
Query: 306 NTMISGFSRHARSVEVMILFEKMQQAGLHPNEQTYISVLSACSHIGMVEKGKSYFDLMVK 365
N MISG+++H + + + LF +M + P+ T+++VL AC+H G+V G +YF+ MV+
Sbjct: 354 NAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVR 413
Query: 366 QHNVLPNVFHYSCMIDILGRAGLIHEAYDLILNMPFDATASMWGSLLASCRNYRNLELAE 425
+ V P HY+CM+D+LGRAG + EA LI +MPF A+++G+LL +CR ++N+ELAE
Sbjct: 414 DYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAE 473
Query: 426 IAAKQLFGMEPDNAGNHLLLSNIYAANRRWEEVARARKLIRDSEVKKEKSKSWVEIKGK- 484
AA++L + NA ++ L+NIYA+ RWE+VAR RK +++S V K SW+EI+ K
Sbjct: 474 FAAEKLLQLNSQNAAGYVQLANIYASKNRWEDVARVRKRMKESNVVKVPGYSWIEIRNKV 533
Query: 485 -------RNHPRIAEIYSKLEKLVEEMKKLGYKPETEHDLHDVEDSRKQELLIHHSEKLA 537
R HP + I+ KL++L ++MK GYKPE E LH+VE+ +K++LL+ HSEKLA
Sbjct: 534 HHFRSSDRIHPELDSIHKKLKELEKKMKLAGYKPELEFALHNVEEEQKEKLLLWHSEKLA 593
Query: 538 LTFGLMCLCPGVPIRIMKNLRICGDCHSFMKFASRIAGRETIVRDLNRFHHFTNGSCSCW 597
+ FG + L G I++ KNLRICGDCH +KF S I RE IVRD RFHHF +GSCSC
Sbjct: 594 VAFGCIKLPQGSQIQVFKNLRICGDCHKAIKFISEIEKREIIVRDTTRFHHFKDGSCSCG 653
Query: 598 DFW 600
D+W
Sbjct: 654 DYW 656
Score = 90.1 bits (222), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 103/220 (46%), Gaps = 35/220 (15%)
Query: 64 LNNDTLTSNILINFYSKCGLISGARKVFDEMPQRCI------------------------ 99
+ + ++ N +I+ Y +CG + A F P R +
Sbjct: 182 MEKNEVSWNAMISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFK 241
Query: 100 --------VSWNTIIGSYTTNGREQEAVALFINMLREGKTPYSEFTVSSVLCACAAKRDV 151
V+WN +I Y N R ++ + LF ML EG P S +SS L C+ +
Sbjct: 242 DMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSS-GLSSALLGCSELSAL 300
Query: 152 FECKQLHVFALKAAMDRNVFVGTALLDVYAKCGLISDASRVFESMPERNEVTWSSMVAGF 211
+Q+H K+ + +V T+L+ +Y KCG + DA ++FE M +++ V W++M++G+
Sbjct: 301 QLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGY 360
Query: 212 VQNELYEEALILFRRAQVLGLEYNQFTISSVICAC--AGL 249
Q+ ++AL LFR + + T +V+ AC AGL
Sbjct: 361 AQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGL 400
Score = 62.8 bits (151), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 78/172 (45%), Gaps = 12/172 (6%)
Query: 34 STLQATLQSCARERAPVRGKVCHAKIIGMGLNNDTLTSNILINFYSKCGLISGARKVFDE 93
S L + L C+ A G+ H + L ND LI+ Y KCG + A K+F+
Sbjct: 285 SGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEV 344
Query: 94 MPQRCIVSWNTIIGSYTTNGREQEAVALFINMLREGKTPYSEFTVSSVLCACAAKRDV-- 151
M ++ +V+WN +I Y +G +A+ LF M+ P T +VL AC V
Sbjct: 345 MKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRP-DWITFVAVLLACNHAGLVNI 403
Query: 152 ----FECKQLHVFALKAAMDRNVFVGTALLDVYAKCGLISDASRVFESMPER 199
FE + + ++ D T ++D+ + G + +A ++ SMP R
Sbjct: 404 GMAYFE-SMVRDYKVEPQPDHY----TCMVDLLGRAGKLEEALKLIRSMPFR 450
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 75/164 (45%), Gaps = 11/164 (6%)
Query: 262 LCKTGFGSNMFAASSLVDMYAKCGCVVDAYFVFSGIEEKNVVLWNTMISGFSRH-ARSVE 320
L K +F + ++ + G + A VF G+ KN + WN+++ G S+ +R +E
Sbjct: 52 LTKPSDQDQIFPLNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMME 111
Query: 321 VMILFEKMQQAGLHPNEQTYISVLSACSHIGMVEKGKSYFDLMVKQHNVLPNVFHYSCMI 380
LF+++ + P+ +Y +LS EK +S+FD M + ++ MI
Sbjct: 112 AHQLFDEIPE----PDTFSYNIMLSCYVRNVNFEKAQSFFDRM-----PFKDAASWNTMI 162
Query: 381 DILGRAGLIHEAYDLILNMPFDATASMWGSLLASCRNYRNLELA 424
R G + +A +L +M + W ++++ +LE A
Sbjct: 163 TGYARRGEMEKARELFYSM-MEKNEVSWNAMISGYIECGDLEKA 205
>sp|Q9LW32|PP258_ARATH Pentatricopeptide repeat-containing protein At3g26782,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H34 PE=2
SV=1
Length = 659
Score = 412 bits (1059), Expect = e-114, Method: Compositional matrix adjust.
Identities = 217/583 (37%), Positives = 340/583 (58%), Gaps = 16/583 (2%)
Query: 34 STLQATLQSCARERAPVRGKVCHAKIIGMGLNNDTLTSNILINFYSKCGLISGARKVFDE 93
S+ +++C+ GK H + G +D S+ LI YS CG + ARKVFDE
Sbjct: 77 SSFPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDE 136
Query: 94 MPQRCIVSWNTIIGSYTTNGREQEAVALFINML-REGKTPYSEFTVS----SVLCACAAK 148
+P+R IVSW ++I Y NG +AV+LF ++L E + F S SV+ AC+
Sbjct: 137 IPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRV 196
Query: 149 RDVFECKQLHVFALKAAMDRNVFVGTALLDVYAKCGL--ISDASRVFESMPERNEVTWSS 206
+ +H F +K DR V VG LLD YAK G ++ A ++F+ + +++ V+++S
Sbjct: 197 PAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNS 256
Query: 207 MVAGFVQNELYEEALILFRR-AQVLGLEYNQFTISSVICACAGLAALIQGKQVHAVLCKT 265
+++ + Q+ + EA +FRR + + +N T+S+V+ A + AL GK +H + +
Sbjct: 257 IMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRM 316
Query: 266 GFGSNMFAASSLVDMYAKCGCVVDAYFVFSGIEEKNVVLWNTMISGFSRHARSVEVMILF 325
G ++ +S++DMY KCG V A F ++ KNV W MI+G+ H + + + LF
Sbjct: 317 GLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELF 376
Query: 326 EKMQQAGLHPNEQTYISVLSACSHIGMVEKGKSYFDLMVKQHNVLPNVFHYSCMIDILGR 385
M +G+ PN T++SVL+ACSH G+ +G +F+ M + V P + HY CM+D+LGR
Sbjct: 377 PAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGR 436
Query: 386 AGLIHEAYDLILNMPFDATASMWGSLLASCRNYRNLELAEIAAKQLFGMEPDNAGNHLLL 445
AG + +AYDLI M + +W SLLA+CR ++N+ELAEI+ +LF ++ N G ++LL
Sbjct: 437 AGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLL 496
Query: 446 SNIYAANRRWEEVARARKLIRDSEVKKEKSKSWVEIKGK--------RNHPRIAEIYSKL 497
S+IYA RW++V R R ++++ + K S +E+ G+ HP+ +IY L
Sbjct: 497 SHIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFL 556
Query: 498 EKLVEEMKKLGYKPETEHDLHDVEDSRKQELLIHHSEKLALTFGLMCLCPGVPIRIMKNL 557
+L ++ + GY T HDV++ K+ L HSEKLA+ FG+M PG + ++KNL
Sbjct: 557 AELNRKLLEAGYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNL 616
Query: 558 RICGDCHSFMKFASRIAGRETIVRDLNRFHHFTNGSCSCWDFW 600
R+C DCH+ +K S+I RE +VRD RFHHF +G CSC D+W
Sbjct: 617 RVCSDCHNVIKLISKIVDREFVVRDAKRFHHFKDGGCSCGDYW 659
Score = 85.9 bits (211), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 101/200 (50%), Gaps = 15/200 (7%)
Query: 190 SRVFESMPERNEV-TWSSMVAGFVQNELYEEALILFRRAQVLGLEYNQFTISSVICACAG 248
+ +F ++ +V +W+S++A ++ EAL+ F + L L + + I AC+
Sbjct: 29 TTLFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSS 88
Query: 249 LAALIQGKQVHAVLCKTGFGSNMFAASSLVDMYAKCGCVVDAYFVFSGIEEKNVVLWNTM 308
L + GKQ H G+ S++F +S+L+ MY+ CG + DA VF I ++N+V W +M
Sbjct: 89 LFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSM 148
Query: 309 ISGFSRHARSVEVMILFEKM------QQAGLHPNEQTYISVLSACSHI---GMVEKGKSY 359
I G+ + +++ + LF+ + + + +SV+SACS + G+ E S+
Sbjct: 149 IRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSF 208
Query: 360 -----FDLMVKQHNVLPNVF 374
FD V N L + +
Sbjct: 209 VIKRGFDRGVSVGNTLLDAY 228
>sp|Q9FXB9|PPR84_ARATH Pentatricopeptide repeat-containing protein At1g56690,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H69 PE=2
SV=1
Length = 704
Score = 411 bits (1056), Expect = e-114, Method: Compositional matrix adjust.
Identities = 216/559 (38%), Positives = 326/559 (58%), Gaps = 19/559 (3%)
Query: 52 GKVCHA-KIIGMGLNNDTLTSNILINFYSKCGLISGARKVFDEMPQRCIVSWNTIIGSYT 110
G++ A K+ M D + S +I + G + AR +FDEM +R +V+W T+I Y
Sbjct: 155 GRIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYR 214
Query: 111 TNGREQEAVALFINMLREGKTPYSEFTVSSVLCACAAKRDVFECKQLHVFALKAAMDRNV 170
N R A LF M + + ++ + L + F V +K V
Sbjct: 215 QNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEF----FEVMPMKP-----V 265
Query: 171 FVGTALLDVYAKCGLISDASRVFESMPERNEVTWSSMVAGFVQNELYEEALILFRRAQVL 230
A++ + + G IS A RVF+ M +R+ TW M+ + + EAL LF + Q
Sbjct: 266 IACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQ 325
Query: 231 GLEYNQFTISSVICACAGLAALIQGKQVHAVLCKTGFGSNMFAASSLVDMYAKCGCVVDA 290
G+ + ++ S++ CA LA+L G+QVHA L + F +++ AS L+ MY KCG +V A
Sbjct: 326 GVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKA 385
Query: 291 YFVFSGIEEKNVVLWNTMISGFSRHARSVEVMILFEKMQQAGLHPNEQTYISVLSACSHI 350
VF K++++WN++ISG++ H E + +F +M +G PN+ T I++L+ACS+
Sbjct: 386 KLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYA 445
Query: 351 GMVEKGKSYFDLMVKQHNVLPNVFHYSCMIDILGRAGLIHEAYDLILNMPFDATASMWGS 410
G +E+G F+ M + V P V HYSC +D+LGRAG + +A +LI +M A++WG+
Sbjct: 446 GKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGA 505
Query: 411 LLASCRNYRNLELAEIAAKQLFGMEPDNAGNHLLLSNIYAANRRWEEVARARKLIRDSEV 470
LL +C+ + L+LAE+AAK+LF EPDNAG ++LLS+I A+ +W +VA RK +R + V
Sbjct: 506 LLGACKTHSRLDLAEVAAKKLFENEPDNAGTYVLLSSINASRSKWGDVAVVRKNMRTNNV 565
Query: 471 KKEKSKSWVEI---------KGKRNHPRIAEIYSKLEKLVEEMKKLGYKPETEHDLHDVE 521
K SW+E+ G +NHP A I LEK +++ GY P+ H LHDV+
Sbjct: 566 SKFPGCSWIEVGKKVHMFTRGGIKNHPEQAMILMMLEKTDGLLREAGYSPDCSHVLHDVD 625
Query: 522 DSRKQELLIHHSEKLALTFGLMCLCPGVPIRIMKNLRICGDCHSFMKFASRIAGRETIVR 581
+ K + L HSE+LA+ +GL+ L GVPIR+MKNLR+CGDCH+ +K S++ RE I+R
Sbjct: 626 EEEKVDSLSRHSERLAVAYGLLKLPEGVPIRVMKNLRVCGDCHAAIKLISKVTEREIILR 685
Query: 582 DLNRFHHFTNGSCSCWDFW 600
D NRFHHF NG CSC D+W
Sbjct: 686 DANRFHHFNNGECSCRDYW 704
Score = 110 bits (274), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 95/363 (26%), Positives = 162/363 (44%), Gaps = 58/363 (15%)
Query: 75 INFYSKCGLISGARKVFDEMPQRCIVSWNTIIGSYTTNGREQEAVALFINMLREGKTPYS 134
I+ S+ G I+ ARK FD + + I SWN+I+ Y +NG +EA LF M
Sbjct: 24 ISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEM--------- 74
Query: 135 EFTVSSVLCACAAKRDVFECKQLHVFALKAAMDRNVFVGTALLDVYAKCGLISDASRVFE 194
+RNV L+ Y K +I +A VFE
Sbjct: 75 -------------------------------SERNVVSWNGLVSGYIKNRMIVEARNVFE 103
Query: 195 SMPERNEVTWSSMVAGFVQNELYEEALILFRRAQVLGLEYNQFTISSVICACAGLAALIQ 254
MPERN V+W++MV G++Q + EA LF R E N+ + + + + +
Sbjct: 104 LMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMP----ERNEVSWTVMFGGLIDDGRIDK 159
Query: 255 GKQVHAVLCKTGFGSNMFAASSLVDMYAKCGCVVDAYFVFSGIEEKNVVLWNTMISGFSR 314
++++ ++ ++ A+++++ + G V +A +F + E+NVV W TMI+G+ +
Sbjct: 160 ARKLYDMMPV----KDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQ 215
Query: 315 HARSVEVMILFEKMQQAGLHPNEQTYISVLSACSHIGMVEKGKSYFDLMVKQHNVLPNVF 374
+ R LFE M + E ++ S+L + G +E + +F++M + V
Sbjct: 216 NNRVDVARKLFEVMPEK----TEVSWTSMLLGYTLSGRIEDAEEFFEVM-----PMKPVI 266
Query: 375 HYSCMIDILGRAGLIHEAYDLILNMPFDATASMWGSLLASCRNYRNLELAEIAAK-QLFG 433
+ MI G G I +A + M A+ G + A R LE ++ A+ Q G
Sbjct: 267 ACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQG 326
Query: 434 MEP 436
+ P
Sbjct: 327 VRP 329
Score = 103 bits (256), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 80/348 (22%), Positives = 168/348 (48%), Gaps = 21/348 (6%)
Query: 67 DTLTSNILINFYSKCGLISGARKVFDEMPQRCIVSWNTIIGSYTTNGREQEAVALFINML 126
+ ++ N L++ Y K +I AR VF+ MP+R +VSW ++ Y G EA +LF M
Sbjct: 78 NVVSWNGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRM- 136
Query: 127 REGKTPYSEFTVSSVLCACAAKRDVFECKQLHVFALKAAMDRNVFVGTALLDVYAKCGLI 186
+E + + + + + ++L+ ++V T ++ + G +
Sbjct: 137 ----PERNEVSWTVMFGGLIDDGRIDKARKLY----DMMPVKDVVASTNMIGGLCREGRV 188
Query: 187 SDASRVFESMPERNEVTWSSMVAGFVQNELYEEALILFRRAQVLGLEYNQFTISSVICAC 246
+A +F+ M ERN VTW++M+ G+ QN + A LF +V+ E + + +S++
Sbjct: 189 DEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLF---EVMP-EKTEVSWTSMLLGY 244
Query: 247 AGLAALIQGKQVHAVLCKTGFGSNMFAASSLVDMYAKCGCVVDAYFVFSGIEEKNVVLWN 306
+ ++ V+ + A ++++ + + G + A VF +E+++ W
Sbjct: 245 TLSGRIEDAEEFFEVMPM----KPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWR 300
Query: 307 TMISGFSRHARSVEVMILFEKMQQAGLHPNEQTYISVLSACSHIGMVEKGKSYFDLMVK- 365
MI + R +E + LF +MQ+ G+ P+ + IS+LS C+ + ++ G+ +V+
Sbjct: 301 GMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRC 360
Query: 366 QHNVLPNVFHYSCMIDILGRAGLIHEAYDLILNMPFDATASMWGSLLA 413
Q + +V+ S ++ + + G + +A L+ + MW S+++
Sbjct: 361 QFD--DDVYVASVLMTMYVKCGELVKA-KLVFDRFSSKDIIMWNSIIS 405
Score = 70.9 bits (172), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 88/179 (49%), Gaps = 3/179 (1%)
Query: 33 LSTLQATLQSCARERAPVRGKVCHAKIIGMGLNNDTLTSNILINFYSKCGLISGARKVFD 92
+L + L CA + G+ HA ++ ++D +++L+ Y KCG + A+ VFD
Sbjct: 331 FPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFD 390
Query: 93 EMPQRCIVSWNTIIGSYTTNGREQEAVALFINMLREGKTPYSEFTVSSVLCACAAKRDVF 152
+ I+ WN+II Y ++G +EA+ +F M G P ++ T+ ++L AC+ +
Sbjct: 391 RFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMP-NKVTLIAILTACSYAGKLE 449
Query: 153 ECKQL-HVFALKAAMDRNVFVGTALLDVYAKCGLISDASRVFESMPERNEVT-WSSMVA 209
E ++ K + V + +D+ + G + A + ESM + + T W +++
Sbjct: 450 EGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLG 508
Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 119/258 (46%), Gaps = 26/258 (10%)
Query: 256 KQVHAVLCKTGFGSNMFAASSLVDMYAKCGCVVDAYFVFSGIEEKNVVLWNTMISGFSRH 315
K++ +L +T S S + ++ G + +A F ++ K + WN+++SG+ +
Sbjct: 2 KRLKLILRRTYLTSTGVNCSFEISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSN 61
Query: 316 ARSVEVMILFEKMQQAGLHPNEQTYISVLSACSHIGMVEKGKSYFDLMVKQHNVLPNVFH 375
E LF++M + N ++ ++S M+ + ++ F+LM ++ NV
Sbjct: 62 GLPKEARQLFDEMSER----NVVSWNGLVSGYIKNRMIVEARNVFELMPER-----NVVS 112
Query: 376 YSCMIDILGRAGLIHEAYDLILNMPFDATAS---MWGSLLASCRNYRNLELAEIAAKQLF 432
++ M+ + G++ EA L MP S M+G L+ R + A++L+
Sbjct: 113 WTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMFGGLIDDGRIDK--------ARKLY 164
Query: 433 GMEPDNAGNHLLLSNIYAANRRWEEVARARKLIRDSEVKKEKSKSWVE-IKGKRNHPRIA 491
M P + + +N+ R V AR LI D E+++ +W I G R + R+
Sbjct: 165 DMMP--VKDVVASTNMIGGLCREGRVDEAR-LIFD-EMRERNVVTWTTMITGYRQNNRV- 219
Query: 492 EIYSKLEKLVEEMKKLGY 509
++ KL +++ E ++ +
Sbjct: 220 DVARKLFEVMPEKTEVSW 237
>sp|Q9LN01|PPR21_ARATH Pentatricopeptide repeat-containing protein At1g08070
OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1
Length = 741
Score = 410 bits (1054), Expect = e-113, Method: Compositional matrix adjust.
Identities = 221/607 (36%), Positives = 345/607 (56%), Gaps = 42/607 (6%)
Query: 35 TLQATLQSCARERAPVRGKVCHAKIIGMGLN----------------------------- 65
T L+SCA+ +A G+ H ++ +G +
Sbjct: 136 TFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKS 195
Query: 66 --NDTLTSNILINFYSKCGLISGARKVFDEMPQRCIVSWNTIIGSYTTNGREQEAVALFI 123
D ++ LI Y+ G I A+K+FDE+P + +VSWN +I Y G +EA+ LF
Sbjct: 196 PHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFK 255
Query: 124 NMLREGKTPYSEFTVSSVLCACAAKRDVFECKQLHVFALKAAMDRNVFVGTALLDVYAKC 183
+M++ P E T+ +V+ ACA + +Q+H++ N+ + AL+D+Y+KC
Sbjct: 256 DMMKTNVRP-DESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKC 314
Query: 184 GLISDASRVFESMPERNEVTWSSMVAGFVQNELYEEALILFRRAQVLGLEYNQFTISSVI 243
G + A +FE +P ++ ++W++++ G+ LY+EAL+LF+ G N T+ S++
Sbjct: 315 GELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSIL 374
Query: 244 CACAGLAALIQGKQVHAVLCK--TGFGSNMFAASSLVDMYAKCGCVVDAYFVFSGIEEKN 301
ACA L A+ G+ +H + K G + +SL+DMYAKCG + A+ VF+ I K+
Sbjct: 375 PACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKS 434
Query: 302 VVLWNTMISGFSRHARSVEVMILFEKMQQAGLHPNEQTYISVLSACSHIGMVEKGKSYFD 361
+ WN MI GF+ H R+ LF +M++ G+ P++ T++ +LSACSH GM++ G+ F
Sbjct: 435 LSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFR 494
Query: 362 LMVKQHNVLPNVFHYSCMIDILGRAGLIHEAYDLILNMPFDATASMWGSLLASCRNYRNL 421
M + + + P + HY CMID+LG +GL EA ++I M + +W SLL +C+ + N+
Sbjct: 495 TMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNV 554
Query: 422 ELAEIAAKQLFGMEPDNAGNHLLLSNIYAANRRWEEVARARKLIRDSEVKKEKSKSWVEI 481
EL E A+ L +EP+N G+++LLSNIYA+ RW EVA+ R L+ D +KK S +EI
Sbjct: 555 ELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEI 614
Query: 482 K--------GKRNHPRIAEIYSKLEKLVEEMKKLGYKPETEHDLHDVEDSRKQELLIHHS 533
G + HPR EIY LE++ ++K G+ P+T L ++E+ K+ L HHS
Sbjct: 615 DSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHS 674
Query: 534 EKLALTFGLMCLCPGVPIRIMKNLRICGDCHSFMKFASRIAGRETIVRDLNRFHHFTNGS 593
EKLA+ FGL+ PG + I+KNLR+C +CH K S+I RE I RD RFHHF +G
Sbjct: 675 EKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGV 734
Query: 594 CSCWDFW 600
CSC D+W
Sbjct: 735 CSCNDYW 741
Score = 174 bits (442), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 118/439 (26%), Positives = 216/439 (49%), Gaps = 48/439 (10%)
Query: 11 FYYKSFSSSAIASASANANATELSTLQ--ATLQSCARERAPVRGKVCHAKIIGMGLNNDT 68
+ + SS+ + N LS L TLQS ++ HA++I +GL+N
Sbjct: 15 YPFHFLPSSSDPPYDSIRNHPSLSLLHNCKTLQSL---------RIIHAQMIKIGLHNTN 65
Query: 69 LTSNILINFYSKCGLISG---ARKVFDEMPQRCIVSWNTIIGSYTTNGREQEAVALFINM 125
+ LI F G A VF + + ++ WNT+ + + A+ L++ M
Sbjct: 66 YALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCM 125
Query: 126 LREGKTPYSEFTVSSVLCACAAKRDVFECKQLHVFALKAAMDRNVFVGTALLDVYAKCGL 185
+ G P S +T VL +CA + E +Q+H LK D +++V T+L+ +Y + G
Sbjct: 126 ISLGLLPNS-YTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGR 184
Query: 186 ISDASRVFESMPER-------------------------------NEVTWSSMVAGFVQN 214
+ DA +VF+ P R + V+W++M++G+ +
Sbjct: 185 LEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAET 244
Query: 215 ELYEEALILFRRAQVLGLEYNQFTISSVICACAGLAALIQGKQVHAVLCKTGFGSNMFAA 274
Y+EAL LF+ + ++ T+ +V+ ACA ++ G+QVH + GFGSN+
Sbjct: 245 GNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIV 304
Query: 275 SSLVDMYAKCGCVVDAYFVFSGIEEKNVVLWNTMISGFSRHARSVEVMILFEKMQQAGLH 334
++L+D+Y+KCG + A +F + K+V+ WNT+I G++ E ++LF++M ++G
Sbjct: 305 NALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGET 364
Query: 335 PNEQTYISVLSACSHIGMVEKGKSYFDLMVKQHNVLPNVFHY-SCMIDILGRAGLIHEAY 393
PN+ T +S+L AC+H+G ++ G+ + K+ + N + +ID+ + G I A+
Sbjct: 365 PNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAH 424
Query: 394 DLILNMPFDATASMWGSLL 412
+ N + S W +++
Sbjct: 425 Q-VFNSILHKSLSSWNAMI 442
>sp|O82380|PP175_ARATH Pentatricopeptide repeat-containing protein At2g29760,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2
SV=1
Length = 738
Score = 409 bits (1052), Expect = e-113, Method: Compositional matrix adjust.
Identities = 218/590 (36%), Positives = 337/590 (57%), Gaps = 42/590 (7%)
Query: 52 GKVCHAKIIGMGLNNDTLTSNILINFYSKCGLISGARKVFDEMPQRCIVSWNTIIGSYTT 111
G+ H + + +D +N LI+ Y CG + A KVF + ++ +VSWN++I +
Sbjct: 150 GQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQ 209
Query: 112 NGREQEAVALFINMLREGKTPYSEFTVSSVLCACAAKRDVFECKQLHVFALKAAMDRNVF 171
G +A+ LF M E S T+ VL ACA R++ +Q+ + + ++ N+
Sbjct: 210 KGSPDKALELFKKMESE-DVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLT 268
Query: 172 VGTALLDVYAKCGLISDASRVFESMPERNEVTWSSMVAGFVQNELYE------------- 218
+ A+LD+Y KCG I DA R+F++M E++ VTW++M+ G+ +E YE
Sbjct: 269 LANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKD 328
Query: 219 ------------------EALILFRRAQVL-GLEYNQFTISSVICACAGLAALIQGKQVH 259
EALI+F Q+ ++ NQ T+ S + ACA + AL G+ +H
Sbjct: 329 IVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIH 388
Query: 260 AVLCKTGFGSNMFAASSLVDMYAKCGCVVDAYFVFSGIEEKNVVLWNTMISGFSRHARSV 319
+ + K G N S+L+ MY+KCG + + VF+ +E+++V +W+ MI G + H
Sbjct: 389 SYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGN 448
Query: 320 EVMILFEKMQQAGLHPNEQTYISVLSACSHIGMVEKGKSYFDLMVKQHNVLPNVFHYSCM 379
E + +F KMQ+A + PN T+ +V ACSH G+V++ +S F M + ++P HY+C+
Sbjct: 449 EAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACI 508
Query: 380 IDILGRAGLIHEAYDLILNMPFDATASMWGSLLASCRNYRNLELAEIAAKQLFGMEPDNA 439
+D+LGR+G + +A I MP + S+WG+LL +C+ + NL LAE+A +L +EP N
Sbjct: 509 VDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRND 568
Query: 440 GNHLLLSNIYAANRRWEEVARARKLIRDSEVKKEKSKSWVEIK--------GKRNHPRIA 491
G H+LLSNIYA +WE V+ RK +R + +KKE S +EI G HP
Sbjct: 569 GAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSE 628
Query: 492 EIYSKLEKLVEEMKKLGYKPETEHDLHDVEDSR-KQELLIHHSEKLALTFGLMCLCPGVP 550
++Y KL +++E++K GY+PE L +E+ K++ L HSEKLA+ +GL+
Sbjct: 629 KVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKV 688
Query: 551 IRIMKNLRICGDCHSFMKFASRIAGRETIVRDLNRFHHFTNGSCSCWDFW 600
IR++KNLR+CGDCHS K S++ RE IVRD RFHHF NG CSC DFW
Sbjct: 689 IRVIKNLRVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRNGQCSCNDFW 738
Score = 169 bits (427), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 129/506 (25%), Positives = 243/506 (48%), Gaps = 63/506 (12%)
Query: 53 KVCHAKIIGMGLNNDTLTSNILINF--YSKCGLISGARKVFDEMPQRCIVSWNTIIGSYT 110
K H +I G +D +++ L S + ARKVFDE+P+ +WNT+I +Y
Sbjct: 47 KQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYA 106
Query: 111 TNGREQEAVALFINMLREGKTPYSEFTVSSVLCACAAKRDVFECKQLHVFALKAAMDRNV 170
+ ++ F++M+ E + +++T ++ A A + + LH A+K+A+ +V
Sbjct: 107 SGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDV 166
Query: 171 FVGTALLDVYAKCGLISDASRVFESMPERNEVTWSSMVAGFVQNELYEEALILFRRAQVL 230
FV +L+ Y CG + A +VF ++ E++ V+W+SM+ GFVQ ++AL LF++ +
Sbjct: 167 FVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESE 226
Query: 231 GLEYNQFTISSVICACAGLAALIQGKQVHAVLCKTGFGSNMFAASSLVDMYAKCGCVVDA 290
++ + T+ V+ ACA + L G+QV + + + N+ A++++DMY KCG + DA
Sbjct: 227 DVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDA 286
Query: 291 YFVFSGIEE-------------------------------KNVVLWNTMISGFSRHARSV 319
+F +EE K++V WN +IS + ++ +
Sbjct: 287 KRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPN 346
Query: 320 EVMILFEKMQ-QAGLHPNEQTYISVLSACSHIGMVEKGKSYFDLMVKQHNVLPNVFHYSC 378
E +I+F ++Q Q + N+ T +S LSAC+ +G +E G+ + +K+H + N S
Sbjct: 347 EALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGR-WIHSYIKKHGIRMNFHVTSA 405
Query: 379 MIDILGRAGLIHEAYDLILNMP----FDATASMWGSLLASCRNYRNLELAEIAAKQLFGM 434
+I + + G + ++ ++ ++ F +A + G + C N A + M
Sbjct: 406 LIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNE--------AVDMFYKM 457
Query: 435 EPDNA-GNHLLLSNIYAANRRWEEVARARKLIRDSE-----VKKEKSKS-WVEIKGKRNH 487
+ N N + +N++ A V A L E V +EK + V++ G+ +
Sbjct: 458 QEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGY 517
Query: 488 PRIAEIYSKLEKLVEEMKKLGYKPET 513
LEK V+ ++ + P T
Sbjct: 518 ---------LEKAVKFIEAMPIPPST 534
Score = 110 bits (275), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 143/315 (45%), Gaps = 33/315 (10%)
Query: 35 TLQATLQSCARERAPVRGKVCHAKIIGMGLNNDTLTSNILINFYSKCGLISGARKVFD-- 92
T+ L +CA+ R G+ + I +N + +N +++ Y+KCG I A+++FD
Sbjct: 234 TMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAM 293
Query: 93 -----------------------------EMPQRCIVSWNTIIGSYTTNGREQEAVALFI 123
MPQ+ IV+WN +I +Y NG+ EA+ +F
Sbjct: 294 EEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFH 353
Query: 124 NMLREGKTPYSEFTVSSVLCACAAKRDVFECKQLHVFALKAAMDRNVFVGTALLDVYAKC 183
+ + ++ T+ S L ACA + + +H + K + N V +AL+ +Y+KC
Sbjct: 354 ELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKC 413
Query: 184 GLISDASRVFESMPERNEVTWSSMVAGFVQNELYEEALILFRRAQVLGLEYNQFTISSVI 243
G + + VF S+ +R+ WS+M+ G + EA+ +F + Q ++ N T ++V
Sbjct: 414 GDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVF 473
Query: 244 CACAGLAALIQGKQV-HAVLCKTGFGSNMFAASSLVDMYAKCGCVVDAY-FVFSGIEEKN 301
CAC+ + + + + H + G + +VD+ + G + A F+ + +
Sbjct: 474 CACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPS 533
Query: 302 VVLWNTMISGFSRHA 316
+W ++ HA
Sbjct: 534 TSVWGALLGACKIHA 548
Score = 100 bits (249), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 129/254 (50%), Gaps = 9/254 (3%)
Query: 153 ECKQLHVFALKAAMDRNVFVGTALLDVYAKCGLIS--DASRVFESMPERNEVTWSSMVAG 210
+ KQ H ++ + + + L + A S A +VF+ +P+ N W++++
Sbjct: 45 QLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRA 104
Query: 211 FVQNELYEEALILFRRAQVLGLEY-NQFTISSVICACAGLAALIQGKQVHAVLCKTGFGS 269
+ ++ F Y N++T +I A A +++L G+ +H + K+ GS
Sbjct: 105 YASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGS 164
Query: 270 NMFAASSLVDMYAKCGCVVDAYFVFSGIEEKNVVLWNTMISGFSRHARSVEVMILFEKMQ 329
++F A+SL+ Y CG + A VF+ I+EK+VV WN+MI+GF + + + LF+KM+
Sbjct: 165 DVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKME 224
Query: 330 QAGLHPNEQTYISVLSACSHIGMVEKGKSYFDLMVKQHNVLPNVFHYSCMIDILGRAGLI 389
+ + T + VLSAC+ I +E G+ ++++ V N+ + M+D+ + G I
Sbjct: 225 SEDVKASHVTMVGVLSACAKIRNLEFGRQVCSY-IEENRVNVNLTLANAMLDMYTKCGSI 283
Query: 390 HEAYDLILNMPFDA 403
+A L FDA
Sbjct: 284 EDAKRL-----FDA 292
>sp|O23169|PP353_ARATH Pentatricopeptide repeat-containing protein At4g37170
OS=Arabidopsis thaliana GN=PCMP-H5 PE=3 SV=1
Length = 691
Score = 408 bits (1049), Expect = e-113, Method: Compositional matrix adjust.
Identities = 220/614 (35%), Positives = 336/614 (54%), Gaps = 39/614 (6%)
Query: 26 ANANATELSTLQATLQSCARERAPVRGKVCHAKIIGMGLNNDTLTSNILINFYSKCGLIS 85
A ST +Q C++ RA GK H I G + N L+ Y+KCG +
Sbjct: 78 GRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLV 137
Query: 86 GARKVFDEMPQRCIVSWNTIIGSYTTNGREQEAVALFINMLREG---------------- 129
ARKVFDEMP R + SWN ++ Y G +EA LF M +
Sbjct: 138 DARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQ 197
Query: 130 ------------KTPYSE---FTVSSVLCACAAKRDVFECKQLHVFALKAAMDRNVFVGT 174
+ P S FTVS + A AA + + K++H ++A +D + + +
Sbjct: 198 PEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWS 257
Query: 175 ALLDVYAKCGLISDASRVFESMPERNEVTWSSMVAGFVQNELYEEALILFRRAQVLGLEY 234
+L+D+Y KCG I +A +F+ + E++ V+W+SM+ + ++ + E LF
Sbjct: 258 SLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERP 317
Query: 235 NQFTISSVICACAGLAALIQGKQVHAVLCKTGFGSNMFAASSLVDMYAKCGCVVDAYFVF 294
N++T + V+ ACA L GKQVH + + GF FA+SSLVDMY KCG + A V
Sbjct: 318 NEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVV 377
Query: 295 SGIEEKNVVLWNTMISGFSRHARSVEVMILFEKMQQAGLHPNEQTYISVLSACSHIGMVE 354
G + ++V W ++I G +++ + E + F+ + ++G P+ T+++VLSAC+H G+VE
Sbjct: 378 DGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVE 437
Query: 355 KGKSYFDLMVKQHNVLPNVFHYSCMIDILGRAGLIHEAYDLILNMPFDATASMWGSLLAS 414
KG +F + ++H + HY+C++D+L R+G + +I MP + +W S+L
Sbjct: 438 KGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGG 497
Query: 415 CRNYRNLELAEIAAKQLFGMEPDNAGNHLLLSNIYAANRRWEEVARARKLIRDSEVKKEK 474
C Y N++LAE AA++LF +EP+N ++ ++NIYAA +WEE + RK +++ V K
Sbjct: 498 CSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGVTKRP 557
Query: 475 SKSWVEIKGKR--------NHPRIAEIYSKLEKLVEEMKKLGYKPETEHDLHDVEDSRKQ 526
SW EIK KR +HP +I L +L ++MK+ GY P T LHDVED +K+
Sbjct: 558 GSSWTEIKRKRHVFIAADTSHPMYNQIVEFLRELRKKMKEEGYVPATSLVLHDVEDEQKE 617
Query: 527 ELLIHHSEKLALTFGLMCLCPGVPIRIMKNLRICGDCHSFMKFASRIAGRETIVRDLNRF 586
E L++HSEKLA+ F ++ G I++ KNLR C DCH +KF S I R+ VRD RF
Sbjct: 618 ENLVYHSEKLAVAFAILSTEEGTAIKVFKNLRSCVDCHGAIKFISNITKRKITVRDSTRF 677
Query: 587 HHFTNGSCSCWDFW 600
H F NG CSC D+W
Sbjct: 678 HCFENGQCSCGDYW 691
Score = 72.4 bits (176), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 95/202 (47%), Gaps = 11/202 (5%)
Query: 214 NELYEEALILFRRAQVLGLEYNQFTISSVICACAGLAALIQGKQVHAVLCKTGFGSNMFA 273
+L EA+ L RA+ + T ++I C+ AL +GK+VH + +GF +
Sbjct: 67 QKLLREAVQLLGRAK----KPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVI 122
Query: 274 ASSLVDMYAKCGCVVDAYFVFSGIEEKNVVLWNTMISGFSRHARSVEVMILFEKMQQAGL 333
+ L+ MYAKCG +VDA VF + +++ WN M++G++ E LF++M +
Sbjct: 123 WNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEK-- 180
Query: 334 HPNEQTYISVLSACSHIGMVEKGKSYFDLMVKQHNVLPNVFHYSCMIDILGRAGLIHEAY 393
+ ++ ++++ E+ + LM + N PN+F S + I
Sbjct: 181 --DSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGK 238
Query: 394 DL---ILNMPFDATASMWGSLL 412
++ I+ D+ +W SL+
Sbjct: 239 EIHGHIVRAGLDSDEVLWSSLM 260
>sp|Q9FFG8|PP417_ARATH Pentatricopeptide repeat-containing protein At5g44230
OS=Arabidopsis thaliana GN=PCMP-H17 PE=2 SV=1
Length = 657
Score = 404 bits (1038), Expect = e-111, Method: Compositional matrix adjust.
Identities = 232/632 (36%), Positives = 340/632 (53%), Gaps = 49/632 (7%)
Query: 14 KSFSSSAIASASANANATELSTLQATLQSCARERAPVRGKVCHAKIIGMGLNNDTLTSNI 73
++ ++S S +N +S+L + L C + K H ++ GL+
Sbjct: 30 RTSNNSGTFSEISNQKELLVSSLISKLDDCINLN---QIKQIHGHVLRKGLDQSCYILTK 86
Query: 74 LINFYSKCGLISG--ARKVFDEMPQRCIVSWNTIIGSYTTNGREQEAVALFINMLREGKT 131
LI +K G+ AR+V + + R W +I Y G+ EA+A++ M +E T
Sbjct: 87 LIRTLTKLGVPMDPYARRVIEPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEIT 146
Query: 132 PYSEFTVSSVLCACAAKRDVFECKQLHVFALKAAMDRNVFVGTALLDVYAKCGLISDASR 191
P S FT S++L AC +D+ +Q H + V+VG ++D+Y KC I A +
Sbjct: 147 PVS-FTFSALLKACGTMKDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARK 205
Query: 192 VFESMPER-------------------------------NEVTWSSMVAGFVQNELYEEA 220
VF+ MPER + V W++MV GF QN +EA
Sbjct: 206 VFDEMPERDVISWTELIAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEA 265
Query: 221 LILFRRAQVLGLEYNQFTISSVICACAGLAALIQGKQVHAVLCKTGF--GSNMFAASSLV 278
L F R + G+ ++ T++ I ACA L A + + K+G+ ++ S+L+
Sbjct: 266 LEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALI 325
Query: 279 DMYAKCGCVVDAYFVFSGIEEKNVVLWNTMISGFSRHARSVEVMILFEKM-QQAGLHPNE 337
DMY+KCG V +A VF + KNV +++MI G + H R+ E + LF M Q + PN
Sbjct: 326 DMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNT 385
Query: 338 QTYISVLSACSHIGMVEKGKSYFDLMVKQHNVLPNVFHYSCMIDILGRAGLIHEAYDLIL 397
T++ L ACSH G+V++G+ FD M + V P HY+CM+D+LGR G + EA +LI
Sbjct: 386 VTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIK 445
Query: 398 NMPFDATASMWGSLLASCRNYRNLELAEIAAKQLFGMEPDNAGNHLLLSNIYAANRRWEE 457
M + +WG+LL +CR + N E+AEIAA+ LF +EPD GN++LLSN+YA+ W
Sbjct: 446 TMSVEPHGGVWGALLGACRIHNNPEIAEIAAEHLFELEPDIIGNYILLSNVYASAGDWGG 505
Query: 458 VARARKLIRDSEVKKEKSKSWVEIK---------GKRNHPRIAEIYSKLEKLVEEMKKLG 508
V R RKLI++ +KK + SWV K G NHP +I KLE+LVE + LG
Sbjct: 506 VLRVRKLIKEKGLKKTPAVSWVVDKNGQMHKFFPGNLNHPMSNKIQDKLEELVERLTVLG 565
Query: 509 YKPETEHDLHDVEDSRKQELLIHHSEKLALTFGLMCLCPGVPIRIMKNLRICGDCHSFMK 568
Y+P+ +DV D+ K+ +LI H+EKLAL F L+ I IMKNLR+C DCH FM+
Sbjct: 566 YQPDLSSVPYDVSDNAKRLILIQHTEKLALAFSLLTTNRDSTITIMKNLRMCLDCHKFMR 625
Query: 569 FASRIAGRETIVRDLNRFHHFTNGSCSCWDFW 600
AS + G+ I+RD RFHHF +G CSC DFW
Sbjct: 626 LASEVTGKVIIMRDNMRFHHFRSGDCSCGDFW 657
>sp|Q56XI1|PPR25_ARATH Pentatricopeptide repeat-containing protein At1g09410
OS=Arabidopsis thaliana GN=PCMP-H18 PE=2 SV=2
Length = 705
Score = 400 bits (1029), Expect = e-110, Method: Compositional matrix adjust.
Identities = 207/554 (37%), Positives = 328/554 (59%), Gaps = 21/554 (3%)
Query: 58 KIIGMGLNNDTLTSNILINFYSKCGLISGARKVFDEMPQRCIVSWNTIIGSYTTNGREQE 117
K+ M + D + +I+ K G + AR++FDEM +R +++W T++ Y N R +
Sbjct: 162 KLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDD 221
Query: 118 AVALFINMLREGKTPYSEFTVSSVLCACAAKRDVFECKQL-HVFALKAAMDRNVFVGTAL 176
A +F M + +E + +S+L + + ++L V +K V A+
Sbjct: 222 ARKIFDVMPEK-----TEVSWTSMLMGYVQNGRIEDAEELFEVMPVKP-----VIACNAM 271
Query: 177 LDVYAKCGLISDASRVFESMPERNEVTWSSMVAGFVQNELYEEALILFRRAQVLGLEYNQ 236
+ + G I+ A RVF+SM ERN+ +W +++ +N EAL LF Q G+
Sbjct: 272 ISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTF 331
Query: 237 FTISSVICACAGLAALIQGKQVHAVLCKTGFGSNMFAASSLVDMYAKCGCVVDAYFVFSG 296
T+ S++ CA LA+L GKQVHA L + F +++ AS L+ MY KCG +V + +F
Sbjct: 332 PTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDR 391
Query: 297 IEEKNVVLWNTMISGFSRHARSVEVMILFEKMQQAG-LHPNEQTYISVLSACSHIGMVEK 355
K++++WN++ISG++ H E + +F +M +G PNE T+++ LSACS+ GMVE+
Sbjct: 392 FPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEE 451
Query: 356 GKSYFDLMVKQHNVLPNVFHYSCMIDILGRAGLIHEAYDLILNMPFDATASMWGSLLASC 415
G ++ M V P HY+CM+D+LGRAG +EA ++I +M + A++WGSLL +C
Sbjct: 452 GLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGAC 511
Query: 416 RNYRNLELAEIAAKQLFGMEPDNAGNHLLLSNIYAANRRWEEVARARKLIRDSEVKKEKS 475
R + L++AE AK+L +EP+N+G ++LLSN+YA+ RW +VA RKL++ V+K
Sbjct: 512 RTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLMKTRLVRKSPG 571
Query: 476 KSWVEIKGK---------RNHPRIAEIYSKLEKLVEEMKKLGYKPETEHDLHDVEDSRKQ 526
SW E++ K +HP I L++L +++ GY P+ + LHDV++ K
Sbjct: 572 CSWTEVENKVHAFTRGGINSHPEQESILKILDELDGLLREAGYNPDCSYALHDVDEEEKV 631
Query: 527 ELLIHHSEKLALTFGLMCLCPGVPIRIMKNLRICGDCHSFMKFASRIAGRETIVRDLNRF 586
L +HSE+LA+ + L+ L G+PIR+MKNLR+C DCH+ +K S++ RE I+RD NRF
Sbjct: 632 NSLKYHSERLAVAYALLKLSEGIPIRVMKNLRVCSDCHTAIKIISKVKEREIILRDANRF 691
Query: 587 HHFTNGSCSCWDFW 600
HHF NG CSC D+W
Sbjct: 692 HHFRNGECSCKDYW 705
Score = 120 bits (300), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 95/372 (25%), Positives = 164/372 (44%), Gaps = 65/372 (17%)
Query: 65 NNDTLTSNILINFYSKCGLISGARKVFDEMPQRCIVSWNTIIGSYTTNGREQEAVALFIN 124
+ + ++ N L++ Y K G I ARKVFD MP+R +VSW ++ Y NG+ A +LF
Sbjct: 76 DRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWK 135
Query: 125 MLREGKTPYSEFTV-----SSVLCAC------AAKRDVFECKQLHVFALKAAMD------ 167
M + K ++ + + AC K ++ +H + +D
Sbjct: 136 MPEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIF 195
Query: 168 -----RNVFVGTALLDVYAKCGLISDASRVFESMPERNEVTWSSMVAGFVQNELYEEALI 222
R+V T ++ Y + + DA ++F+ MPE+ EV+W+SM+ G+VQN E+A
Sbjct: 196 DEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEE 255
Query: 223 LFRRAQVLGLEYNQFTISSVICACAGLAALIQGKQVHAVLCKTGFGSNMFAASSLVDMYA 282
LF V + AC + +G G
Sbjct: 256 LFEVMPV-----------KPVIACNAMI--------------SGLGQK------------ 278
Query: 283 KCGCVVDAYFVFSGIEEKNVVLWNTMISGFSRHARSVEVMILFEKMQQAGLHPNEQTYIS 342
G + A VF ++E+N W T+I R+ +E + LF MQ+ G+ P T IS
Sbjct: 279 --GEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLIS 336
Query: 343 VLSACSHIGMVEKGKSYFDLMVK-QHNVLPNVFHYSCMIDILGRAGLIHEAYDLILNMPF 401
+LS C+ + + GK +V+ Q +V +V+ S ++ + + G + ++ LI +
Sbjct: 337 ILSVCASLASLHHGKQVHAQLVRCQFDV--DVYVASVLMTMYIKCGELVKS-KLIFDRFP 393
Query: 402 DATASMWGSLLA 413
MW S+++
Sbjct: 394 SKDIIMWNSIIS 405
Score = 78.6 bits (192), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 89/184 (48%), Gaps = 10/184 (5%)
Query: 33 LSTLQATLQSCARERAPVRGKVCHAKIIGMGLNNDTLTSNILINFYSKCGLISGARKVFD 92
TL + L CA + GK HA+++ + D +++L+ Y KCG + ++ +FD
Sbjct: 331 FPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFD 390
Query: 93 EMPQRCIVSWNTIIGSYTTNGREQEAVALFINMLREGKTPYSEFTVSSVLCACAAKRDVF 152
P + I+ WN+II Y ++G +EA+ +F M G T +E T + L AC+ V
Sbjct: 391 RFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVE 450
Query: 153 ECKQLH-----VFALKAAMDRNVFVGTALLDVYAKCGLISDASRVFESMP-ERNEVTWSS 206
E +++ VF +K ++D+ + G ++A + +SM E + W S
Sbjct: 451 EGLKIYESMESVFGVKPITAHY----ACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGS 506
Query: 207 MVAG 210
++
Sbjct: 507 LLGA 510
>sp|Q9LUL5|PP229_ARATH Pentatricopeptide repeat-containing protein At3g14330
OS=Arabidopsis thaliana GN=PCMP-H57 PE=2 SV=2
Length = 710
Score = 400 bits (1028), Expect = e-110, Method: Compositional matrix adjust.
Identities = 212/563 (37%), Positives = 336/563 (59%), Gaps = 24/563 (4%)
Query: 58 KIIGMGLNNDTLTSNI-----LINFYSKCGLISGARKVFDEMPQRCIVS---WNTIIGSY 109
KI + LNN +L N LI +S C + ARK+FD++ +++ W + Y
Sbjct: 152 KICSLILNNPSLRHNPKLLSKLITLFSVCRRLDLARKIFDDVTDSSLLTEKVWAAMAIGY 211
Query: 110 TTNGREQEAVALFINMLREGKTPYSEFTVSSVLCACAAKRDVFECKQLHVFALKAAMDRN 169
+ NG ++A+ ++++ML P F++S L AC +D+ + +H +K +
Sbjct: 212 SRNGSPRDALIVYVDMLCSFIEP-GNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVD 270
Query: 170 VFVGTALLDVYAKCGLISDASRVFESMPERNEVTWSSMVAGFVQNELYEEALILFRRAQV 229
V LL +Y + GL DA +VF+ M ERN VTW+S+++ + E LFR+ Q
Sbjct: 271 QVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQE 330
Query: 230 LGLEYNQFTISSVICACAGLAALIQGKQVHAVLCKTGFGSNMFAASSLVDMYAKCGCVVD 289
+ ++ T+++++ AC+ +AAL+ GK++HA + K+ ++ +SL+DMY KCG V
Sbjct: 331 EMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEY 390
Query: 290 AYFVFSGIEEKNVVLWNTMISGFSRHARSVEVMILFEKMQQAGLHPNEQTYISVLSACSH 349
+ VF + K++ WN M++ ++ + EV+ LFE M ++G+ P+ T++++LS CS
Sbjct: 391 SRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSD 450
Query: 350 IGMVEKGKSYFDLMVKQHNVLPNVFHYSCMIDILGRAGLIHEAYDLILNMPFDATASMWG 409
G+ E G S F+ M + V P + HY+C++DILGRAG I EA +I MPF +AS+WG
Sbjct: 451 TGLTEYGLSLFERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWG 510
Query: 410 SLLASCRNYRNLELAEIAAKQLFGMEPDNAGNHLLLSNIYAANRRWEEVARARKLIRDSE 469
SLL SCR + N+ + EIAAK+LF +EP N GN++++SNIYA + W+ V + R++++
Sbjct: 511 SLLNSCRLHGNVSVGEIAAKELFVLEPHNPGNYVMVSNIYADAKMWDNVDKIREMMKQRG 570
Query: 470 VKKEKSKSWVEIKGK------------RNHPRIAEIYSKLEKLVEEMKKLGYKPETEHDL 517
VKKE SWV++K K RN +++++L++ +E K GY P T L
Sbjct: 571 VKKEAGCSWVQVKDKIQIFVAGGGYEFRNSDEYKKVWTELQEAIE---KSGYSPNTSVVL 627
Query: 518 HDVEDSRKQELLIHHSEKLALTFGLMCLCPGVPIRIMKNLRICGDCHSFMKFASRIAGRE 577
HDV++ K + HSE+LA T+ L+ GVPIRI KNLR+C DCHS+MK S++ R
Sbjct: 628 HDVDEETKANWVCGHSERLATTYSLIHTGEGVPIRITKNLRVCADCHSWMKIVSQVTRRV 687
Query: 578 TIVRDLNRFHHFTNGSCSCWDFW 600
++RD RFHHF +G CSC D+W
Sbjct: 688 IVLRDTKRFHHFVDGICSCKDYW 710
>sp|Q9FK33|PP427_ARATH Pentatricopeptide repeat-containing protein At5g50390,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H58 PE=2
SV=1
Length = 701
Score = 400 bits (1028), Expect = e-110, Method: Compositional matrix adjust.
Identities = 211/581 (36%), Positives = 335/581 (57%), Gaps = 15/581 (2%)
Query: 33 LSTLQATLQSCARERAPVRGKVCHAKIIGMGLNNDTLTSNILINFYSKCGLISGARKVFD 92
+ST A +++C R ++ K + ++ G + N ++ + KCG+I AR++FD
Sbjct: 123 VSTYDALVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFD 182
Query: 93 EMPQRCIVSWNTIIGSYTTNGREQEAVALFINMLREGKTPYSEFTVSSVLCACAAKRDVF 152
E+P+R + S+ +II + G EA LF M+ E + T + +L A A ++
Sbjct: 183 EIPERNLYSYYSIISGFVNFGNYVEAFELF-KMMWEELSDCETHTFAVMLRASAGLGSIY 241
Query: 153 ECKQLHVFALKAAMDRNVFVGTALLDVYAKCGLISDASRVFESMPERNEVTWSSMVAGFV 212
KQLHV ALK + N FV L+D+Y+KCG I DA FE MPE+ V W++++AG+
Sbjct: 242 VGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYA 301
Query: 213 QNELYEEALILFRRAQVLGLEYNQFTISSVICACAGLAALIQGKQVHAVLCKTGFGSNMF 272
+ EEAL L + G+ +QFT+S +I LA L KQ HA L + GF S +
Sbjct: 302 LHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIV 361
Query: 273 AASSLVDMYAKCGCVVDAYFVFSGIEEKNVVLWNTMISGFSRHARSVEVMILFEKMQQAG 332
A ++LVD Y+K G V A +VF + KN++ WN ++ G++ H R + + LFEKM A
Sbjct: 362 ANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKMIAAN 421
Query: 333 LHPNEQTYISVLSACSHIGMVEKGKSYFDLMVKQHNVLPNVFHYSCMIDILGRAGLIHEA 392
+ PN T+++VLSAC++ G+ E+G F M + H + P HY+CMI++LGR GL+ EA
Sbjct: 422 VAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPRAMHYACMIELLGRDGLLDEA 481
Query: 393 YDLILNMPFDATASMWGSLLASCRNYRNLELAEIAAKQLFGMEPDNAGNHLLLSNIYAAN 452
I P T +MW +LL +CR NLEL + A++L+GM P+ GN++++ N+Y +
Sbjct: 482 IAFIRRAPLKTTVNMWAALLNACRMQENLELGRVVAEKLYGMGPEKLGNYVVMYNMYNSM 541
Query: 453 RRWEEVARARKLIRDSEVKKEKSKSWVEIKGKRNHPRIA-------------EIYSKLEK 499
+ E A + + + + +WVE+ G + H ++ +IY K+++
Sbjct: 542 GKTAEAAGVLETLESKGLSMMPACTWVEV-GDQTHSFLSGDRFDSYNETVKRQIYQKVDE 600
Query: 500 LVEEMKKLGYKPETEHDLHDVEDSRKQELLIHHSEKLALTFGLMCLCPGVPIRIMKNLRI 559
L+EE+ + GY E +H L DV++ ++ + +HSEKLA+ +GL+ P++I +N RI
Sbjct: 601 LMEEISEYGYSEEEQHLLPDVDEKEEERVGRYHSEKLAIAYGLVNTPEWNPLQITQNHRI 660
Query: 560 CGDCHSFMKFASRIAGRETIVRDLNRFHHFTNGSCSCWDFW 600
C +CH ++F S + GRE +VRD +RFHHF G CSC +W
Sbjct: 661 CKNCHKVVEFISLVTGREMVVRDASRFHHFKEGKCSCGGYW 701
Score = 114 bits (285), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 137/282 (48%), Gaps = 3/282 (1%)
Query: 32 ELSTLQATLQSCARERAPVRGKVCHAKIIGMGLNNDTLTSNILINFYSKCGLISGARKVF 91
E T L++ A + GK H + +G+ ++T S LI+ YSKCG I AR F
Sbjct: 223 ETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAF 282
Query: 92 DEMPQRCIVSWNTIIGSYTTNGREQEAVALFINMLREGKTPYSEFTVSSVLCACAAKRDV 151
+ MP++ V+WN +I Y +G +EA+ L +M R+ +FT+S ++ +
Sbjct: 283 ECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDM-RDSGVSIDQFTLSIMIRISTKLAKL 341
Query: 152 FECKQLHVFALKAAMDRNVFVGTALLDVYAKCGLISDASRVFESMPERNEVTWSSMVAGF 211
KQ H ++ + + TAL+D Y+K G + A VF+ +P +N ++W++++ G+
Sbjct: 342 ELTKQAHASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGY 401
Query: 212 VQNELYEEALILFRRAQVLGLEYNQFTISSVICACAGLAALIQGKQVHAVLCKT-GFGSN 270
+ +A+ LF + + N T +V+ ACA QG ++ + + G
Sbjct: 402 ANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPR 461
Query: 271 MFAASSLVDMYAKCGCVVDAY-FVFSGIEEKNVVLWNTMISG 311
+ ++++ + G + +A F+ + V +W +++
Sbjct: 462 AMHYACMIELLGRDGLLDEAIAFIRRAPLKTTVNMWAALLNA 503
>sp|O23337|PP311_ARATH Pentatricopeptide repeat-containing protein At4g14820
OS=Arabidopsis thaliana GN=PCMP-H3 PE=2 SV=1
Length = 722
Score = 400 bits (1028), Expect = e-110, Method: Compositional matrix adjust.
Identities = 221/610 (36%), Positives = 342/610 (56%), Gaps = 54/610 (8%)
Query: 40 LQSCARERAPVRGKVCHAKIIGMGLNNDTLTSNILINFYSKCGLISGARKVFDEMPQRCI 99
L++ ++ A G H + D ++ Y+ CG I+ AR VFDEM R +
Sbjct: 118 LKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDV 177
Query: 100 VSWNTIIGSYTTNGREQEAVALFINMLREGKTPYSEFTVSSVLCACAA------KRDVFE 153
V+WNT+I Y G EA LF M P E + +++ AC R ++E
Sbjct: 178 VTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMP-DEMILCNIVSACGRTGNMRYNRAIYE 236
Query: 154 --------------CKQLHVFALKAAMD-----------RNVFVGTALLDVYAKCGLISD 188
+ ++A MD RN+FV TA++ Y+KCG + D
Sbjct: 237 FLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDD 296
Query: 189 ASRVFESMPERNEVTWSSMVAGFVQNELYEEALILFRRAQVLGLEYNQFTISSVICACAG 248
A +F+ +++ V W++M++ +V+++ +EAL +F G++ + ++ SVI ACA
Sbjct: 297 AQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACAN 356
Query: 249 LAALIQGKQVHAVLCKTGFGSNMFAASSLVDMYAKCGCVVDAYFVFSGIEEKNVVLWNTM 308
L L + K VH+ + G S + ++L++MYAKCG + VF + +NVV W++M
Sbjct: 357 LGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSM 416
Query: 309 ISGFSRHARSVEVMILFEKMQQAGLHPNEQTYISVLSACSHIGMVEKGKSYFDLMVKQHN 368
I+ S H + + + LF +M+Q + PNE T++ VL CSH G+VE+GK F M ++N
Sbjct: 417 INALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYN 476
Query: 369 VLPNVFHYSCMIDILGRAGLIHEAYDLILNMPFDATASMWGSLLASCRNYRNLELAEIAA 428
+ P + HY CM+D+ GRA L+ EA ++I +MP + +WGSL+++CR + LEL + AA
Sbjct: 477 ITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAA 536
Query: 429 KQLFGMEPDNAGNHLLLSNIYAANRRWEEVARARKLIRDSEVKKEKSKSWVEIKGK---- 484
K++ +EPD+ G +L+SNIYA +RWE+V R+++ + V KEK S ++ GK
Sbjct: 537 KRILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEF 596
Query: 485 ----RNHPRIAEIYSKLEKLVEEMKKLGYKPETEHDLHDVEDSRKQELLIHHSEKLALTF 540
+ H + EIY+KL+++V ++K GY P+ L DVE+ K++L++ HSEKLAL F
Sbjct: 597 LIGDKRHKQSNEIYAKLDEVVSKLKLAGYVPDCGSVLVDVEEEEKKDLVLWHSEKLALCF 656
Query: 541 GLM----------CLCPGVPIRIMKNLRICGDCHSFMKFASRIAGRETIVRDLNRFHHFT 590
GLM C GV IRI+KNLR+C DCH F K S++ RE IVRD RFH +
Sbjct: 657 GLMNEEKEEEKDSC---GV-IRIVKNLRVCEDCHLFFKLVSKVYEREIIVRDRTRFHCYK 712
Query: 591 NGSCSCWDFW 600
NG CSC D+W
Sbjct: 713 NGLCSCRDYW 722
Score = 124 bits (310), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 155/329 (47%), Gaps = 33/329 (10%)
Query: 115 EQEAVALFINMLREGKTPYSEFTVSSVLCACAAKRDVFECKQLHVFALKAAMDRNVFVGT 174
E A LF +R +F+ +L A + +FE +LH A K A + FV T
Sbjct: 91 EPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHGVAFKIATLCDPFVET 150
Query: 175 ALLDVYAKCGLISDASRVFESMPERNEVTWSSMVAGFVQNELYEEALILFRRAQVLGLEY 234
+D+YA CG I+ A VF+ M R+ VTW++M+ + + L +EA LF + +
Sbjct: 151 GFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMP 210
Query: 235 NQFTISSVICACAGLAALIQGKQVHAVLCKT-----------------GFG--------- 268
++ + +++ AC + + ++ L + G G
Sbjct: 211 DEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFF 270
Query: 269 -----SNMFAASSLVDMYAKCGCVVDAYFVFSGIEEKNVVLWNTMISGFSRHARSVEVMI 323
N+F ++++V Y+KCG + DA +F E+K++V W TMIS + E +
Sbjct: 271 RKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALR 330
Query: 324 LFEKMQQAGLHPNEQTYISVLSACSHIGMVEKGKSYFDLMVKQHNVLPNVFHYSCMIDIL 383
+FE+M +G+ P+ + SV+SAC+++G+++K K + + + + + + +I++
Sbjct: 331 VFEEMCCSGIKPDVVSMFSVISACANLGILDKAK-WVHSCIHVNGLESELSINNALINMY 389
Query: 384 GRAGLIHEAYDLILNMPFDATASMWGSLL 412
+ G + D+ MP S W S++
Sbjct: 390 AKCGGLDATRDVFEKMPRRNVVS-WSSMI 417
Score = 85.1 bits (209), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 98/186 (52%), Gaps = 13/186 (6%)
Query: 32 ELSTLQATLQSCARERAPVRGKVCHAKIIGMGLNNDTLTSNILINFYSKCGLISGARKVF 91
++ ++ + + +CA + K H+ I GL ++ +N LIN Y+KCG + R VF
Sbjct: 343 DVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVF 402
Query: 92 DEMPQRCIVSWNTIIGSYTTNGREQEAVALFINMLREGKTPYSEFTVSSVLCACAAKRDV 151
++MP+R +VSW+++I + + +G +A++LF M +E P +E T VL C+ V
Sbjct: 403 EKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEP-NEVTFVGVLYGCSHSGLV 461
Query: 152 FECKQLHVFALKAAMDRNVFVGTAL------LDVYAKCGLISDASRVFESMP-ERNEVTW 204
E K++ A+M + L +D++ + L+ +A V ESMP N V W
Sbjct: 462 EEGKKIF-----ASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIW 516
Query: 205 SSMVAG 210
S+++
Sbjct: 517 GSLMSA 522
>sp|Q9LFL5|PP390_ARATH Pentatricopeptide repeat-containing protein At5g16860
OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1
Length = 850
Score = 399 bits (1026), Expect = e-110, Method: Compositional matrix adjust.
Identities = 227/622 (36%), Positives = 334/622 (53%), Gaps = 58/622 (9%)
Query: 35 TLQATLQSCARERAPVRGKVCHAKIIGMGLNNDTLTSNILINFYSKCGLISGARKVFDEM 94
TL L CA GK H + + + N L++ Y+KCG++ A VF M
Sbjct: 231 TLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNM 290
Query: 95 PQRCIVSWNTIIGSYTTNGREQEAVALF-------------------------------- 122
+ +VSWN ++ Y+ GR ++AV LF
Sbjct: 291 SVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEAL 350
Query: 123 ---INMLREGKTPYSEFTVSSVLCACAAKRDVFECKQLHVFALKAAMD--------RNVF 171
ML G P +E T+ SVL CA+ + K++H +A+K +D N+
Sbjct: 351 GVCRQMLSSGIKP-NEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMV 409
Query: 172 VGTALLDVYAKCGLISDASRVFESMP--ERNEVTWSSMVAGFVQNELYEEALILFRR--A 227
+ L+D+YAKC + A +F+S+ ER+ VTW+ M+ G+ Q+ +AL L
Sbjct: 410 I-NQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFE 468
Query: 228 QVLGLEYNQFTISSVICACAGLAALIQGKQVHAVLCKTGFGS-NMFAASSLVDMYAKCGC 286
+ N FTIS + ACA LAAL GKQ+HA + + +F ++ L+DMYAKCG
Sbjct: 469 EDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGS 528
Query: 287 VVDAYFVFSGIEEKNVVLWNTMISGFSRHARSVEVMILFEKMQQAGLHPNEQTYISVLSA 346
+ DA VF + KN V W ++++G+ H E + +F++M++ G + T + VL A
Sbjct: 529 ISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYA 588
Query: 347 CSHIGMVEKGKSYFDLMVKQHNVLPNVFHYSCMIDILGRAGLIHEAYDLILNMPFDATAS 406
CSH GM+++G YF+ M V P HY+C++D+LGRAG ++ A LI MP +
Sbjct: 589 CSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPV 648
Query: 407 MWGSLLASCRNYRNLELAEIAAKQLFGMEPDNAGNHLLLSNIYAANRRWEEVARARKLIR 466
+W + L+ CR + +EL E AA+++ + ++ G++ LLSN+YA RW++V R R L+R
Sbjct: 649 VWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMR 708
Query: 467 DSEVKKEKSKSWVE-IK-------GKRNHPRIAEIYSKLEKLVEEMKKLGYKPETEHDLH 518
VKK SWVE IK G + HP EIY L ++ +K +GY PET LH
Sbjct: 709 HKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVLLDHMQRIKDIGYVPETGFALH 768
Query: 519 DVEDSRKQELLIHHSEKLALTFGLMCLCPGVPIRIMKNLRICGDCHSFMKFASRIAGRET 578
DV+D K +LL HSEKLAL +G++ G IRI KNLR+CGDCH+ + SRI +
Sbjct: 769 DVDDEEKDDLLFEHSEKLALAYGILTTPQGAAIRITKNLRVCGDCHTAFTYMSRIIDHDI 828
Query: 579 IVRDLNRFHHFTNGSCSCWDFW 600
I+RD +RFHHF NGSCSC +W
Sbjct: 829 ILRDSSRFHHFKNGSCSCKGYW 850
Score = 197 bits (501), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 135/427 (31%), Positives = 212/427 (49%), Gaps = 51/427 (11%)
Query: 35 TLQATLQSCARERAPVR-GKVCHAKIIGMGLNNDTLTSNILINFYSKCGLISGARKVFDE 93
T ++C E + VR G+ HA + G ++ N L+ YS+C +S ARKVFDE
Sbjct: 129 TFPFVFKACG-EISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDE 187
Query: 94 MPQRCIVSWNTIIGSYTTNGREQEAVALFINMLREGKTPYSEFTVSSVLCACAAKRDVFE 153
M +VSWN+II SY G+ + A+ +F M E T+ +VL CA+
Sbjct: 188 MSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSL 247
Query: 154 CKQLHVFALKAAMDRNVFVGTALLDVYAKCGLISDASRVFESMPERNEVTWSSMVAGFVQ 213
KQLH FA+ + M +N+FVG L+D+YAKCG++ +A+ VF +M ++ V+W++MVAG+ Q
Sbjct: 248 GKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQ 307
Query: 214 NELYEEALILFRRAQ-----------------------------------VLGLEYNQFT 238
+E+A+ LF + Q G++ N+ T
Sbjct: 308 IGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVT 367
Query: 239 ISSVICACAGLAALIQGKQVHAV-------LCKTGFGSNMFAASSLVDMYAKCGCVVDAY 291
+ SV+ CA + AL+ GK++H L K G G + L+DMYAKC V A
Sbjct: 368 LISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTAR 427
Query: 292 FVFSGI--EEKNVVLWNTMISGFSRHARSVEVMILFEKM--QQAGLHPNEQTYISVLSAC 347
+F + +E++VV W MI G+S+H + + + L +M + PN T L AC
Sbjct: 428 AMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVAC 487
Query: 348 SHIGMVEKGKSYFDLMVK-QHNVLPNVFHYSCMIDILGRAGLIHEAYDLILNMPFDATAS 406
+ + + GK ++ Q N +P +F +C+ID+ + G I +A + NM
Sbjct: 488 ASLAALRIGKQIHAYALRNQQNAVP-LFVSNCLIDMYAKCGSISDARLVFDNM-MAKNEV 545
Query: 407 MWGSLLA 413
W SL+
Sbjct: 546 TWTSLMT 552
Score = 160 bits (405), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 110/343 (32%), Positives = 165/343 (48%), Gaps = 40/343 (11%)
Query: 53 KVCHAKIIGMGLNNDTLTSNILINFYSKCGLISGARKVFDEMPQR--CIVSWNTIIGSYT 110
K+ H K++ G+ LTS+ LI+ Y G +S A + P + WN++I SY
Sbjct: 45 KLIHQKLLSFGILTLNLTSH-LISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYG 103
Query: 111 TNGREQEAVALFINMLREGKTPYSEFTVSSVLCACAAKRDVFECKQLHVFALKAAMDRNV 170
NG + + LF M TP +T V AC V + H +L NV
Sbjct: 104 DNGCANKCLYLFGLMHSLSWTP-DNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNV 162
Query: 171 FVGTALLDVYAKCGLISDASRVFESMPERNEVTWSSMVAGFVQNELYEEALILFRR-AQV 229
FVG AL+ +Y++C +SDA +VF+ M + V+W+S++ + + + AL +F R
Sbjct: 163 FVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNE 222
Query: 230 LGLEYNQFTISSVICACAGLAALIQGKQVHAVLCKTGFGSNMFAASSLVDMYAKCGCVVD 289
G + T+ +V+ CA L GKQ+H + NMF + LVDMYAKCG + +
Sbjct: 223 FGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDE 282
Query: 290 AYFVFSGIEEKNVVLWNTMISGFSRHARSVEVMILFEKMQQ------------------- 330
A VFS + K+VV WN M++G+S+ R + + LFEKMQ+
Sbjct: 283 ANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQ 342
Query: 331 ----------------AGLHPNEQTYISVLSACSHIGMVEKGK 357
+G+ PNE T ISVLS C+ +G + GK
Sbjct: 343 RGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGK 385
Score = 102 bits (255), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 118/241 (48%), Gaps = 5/241 (2%)
Query: 176 LLDVYAKCGLISDASRVFESMPERNEVT--WSSMVAGFVQNELYEEALILFRRAQVLGLE 233
L+ Y G +S A + P + W+S++ + N + L LF L
Sbjct: 65 LISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWT 124
Query: 234 YNQFTISSVICACAGLAALIQGKQVHAVLCKTGFGSNMFAASSLVDMYAKCGCVVDAYFV 293
+ +T V AC ++++ G+ HA+ TGF SN+F ++LV MY++C + DA V
Sbjct: 125 PDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKV 184
Query: 294 FSGIEEKNVVLWNTMISGFSRHARSVEVMILFEKM-QQAGLHPNEQTYISVLSACSHIGM 352
F + +VV WN++I +++ + + +F +M + G P+ T ++VL C+ +G
Sbjct: 185 FDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGT 244
Query: 353 VEKGKSYFDLMVKQHNVLPNVFHYSCMIDILGRAGLIHEAYDLILNMPFDATASMWGSLL 412
GK V ++ N+F +C++D+ + G++ EA + NM S W +++
Sbjct: 245 HSLGKQLHCFAVTS-EMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVS-WNAMV 302
Query: 413 A 413
A
Sbjct: 303 A 303
Score = 42.4 bits (98), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 77/193 (39%), Gaps = 14/193 (7%)
Query: 254 QGKQVHAVLCKTGFGSNMFAASSLVDMYAKCGCVVDAYFVFSGI--EEKNVVLWNTMISG 311
Q K +H L G + + S L+ Y GC+ A + + V WN++I
Sbjct: 43 QVKLIHQKLLSFGILT-LNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRS 101
Query: 312 FSRHARSVEVMILFEKMQQAGLHPNEQTYISVLSACSHIGMVEKGKSYFDLMVKQHNVLP 371
+ + + + + LF M P+ T+ V AC I V G+S L + +
Sbjct: 102 YGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVT-GFIS 160
Query: 372 NVFHYSCMIDILGRAGLIHEAYDLILNMPFDATASMWGSLLASCRNYRNLELAEIAAKQL 431
NVF + ++ + R + +A + M S W S++ S Y L ++A +
Sbjct: 161 NVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVS-WNSIIES---YAKLGKPKVALEMF 216
Query: 432 ------FGMEPDN 438
FG PDN
Sbjct: 217 SRMTNEFGCRPDN 229
>sp|Q0WN60|PPR48_ARATH Pentatricopeptide repeat-containing protein At1g18485
OS=Arabidopsis thaliana GN=PCMP-H8 PE=2 SV=2
Length = 970
Score = 395 bits (1014), Expect = e-109, Method: Compositional matrix adjust.
Identities = 208/587 (35%), Positives = 343/587 (58%), Gaps = 11/587 (1%)
Query: 23 SASANANATELSTLQATLQSCARERAPVRGKVCHAKIIGMGLNNDTLTSNILINFYSKCG 82
+ + A E++ L A + C E K H + + L +N + Y+KCG
Sbjct: 386 AGGEDVKADEVTILNA-VPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCG 444
Query: 83 LISGARKVFDEMPQRCIVSWNTIIGSYTTNGREQEAVALFINMLREGKTPYSEFTVSSVL 142
+S A++VF + + + SWN +IG + + + ++ + M G P S FTV S+L
Sbjct: 445 SLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDS-FTVCSLL 503
Query: 143 CACAAKRDVFECKQLHVFALKAAMDRNVFVGTALLDVYAKCGLISDASRVFESMPERNEV 202
AC+ + + K++H F ++ ++R++FV ++L +Y CG + +F++M +++ V
Sbjct: 504 SACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLV 563
Query: 203 TWSSMVAGFVQNELYEEALILFRRAQVLGLEYNQFTISSVICACAGLAALIQGKQVHAVL 262
+W++++ G++QN + AL +FR+ + G++ ++ V AC+ L +L G++ HA
Sbjct: 564 SWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYA 623
Query: 263 CKTGFGSNMFAASSLVDMYAKCGCVVDAYFVFSGIEEKNVVLWNTMISGFSRHARSVEVM 322
K + F A SL+DMYAK G + + VF+G++EK+ WN MI G+ H + E +
Sbjct: 624 LKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAI 683
Query: 323 ILFEKMQQAGLHPNEQTYISVLSACSHIGMVEKGKSYFDLMVKQHNVLPNVFHYSCMIDI 382
LFE+MQ+ G +P++ T++ VL+AC+H G++ +G Y D M + PN+ HY+C+ID+
Sbjct: 684 KLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDM 743
Query: 383 LGRAGLIHEAYDLIL-NMPFDATASMWGSLLASCRNYRNLELAEIAAKQLFGMEPDNAGN 441
LGRAG + +A ++ M +A +W SLL+SCR ++NLE+ E A +LF +EP+ N
Sbjct: 744 LGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPEN 803
Query: 442 HLLLSNIYAANRRWEEVARARKLIRDSEVKKEKSKSWVEIK--------GKRNHPRIAEI 493
++LLSN+YA +WE+V + R+ + + ++K+ SW+E+ G+R EI
Sbjct: 804 YVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEI 863
Query: 494 YSKLEKLVEEMKKLGYKPETEHDLHDVEDSRKQELLIHHSEKLALTFGLMCLCPGVPIRI 553
S L ++ K+GY+P+T HD+ + K E L HSEKLALT+GL+ G IR+
Sbjct: 864 KSLWSILEMKISKMGYRPDTMSVQHDLSEEEKIEQLRGHSEKLALTYGLIKTSEGTTIRV 923
Query: 554 MKNLRICGDCHSFMKFASRIAGRETIVRDLNRFHHFTNGSCSCWDFW 600
KNLRIC DCH+ K S++ RE +VRD RFHHF NG CSC D+W
Sbjct: 924 YKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNGVCSCGDYW 970
Score = 163 bits (413), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 102/337 (30%), Positives = 159/337 (47%), Gaps = 15/337 (4%)
Query: 24 ASANANATELSTLQATLQSCARERAPVRGKVCHAKIIG-MGLNNDTLTSNILINFYSKCG 82
+S++A L LQ+ + + G+ H + G L ND + +I Y+ CG
Sbjct: 75 SSSDAFLLVREALGLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCG 134
Query: 83 LISGARKVFDEMPQRCIVSWNTIIGSYTTNGREQEAVALFINMLREGKTPYSEFTVSSVL 142
+R VFD + + + WN +I SY+ N E + FI M+ FT V+
Sbjct: 135 SPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVI 194
Query: 143 CACAAKRDVFECKQLHVFALKAAMDRNVFVGTALLDVYAKCGLISDASRVFESMPERNEV 202
ACA DV +H +K + +VFVG AL+ Y G ++DA ++F+ MPERN V
Sbjct: 195 KACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLV 254
Query: 203 TWSSMVAGFVQNELYEEALILFRRAQVLGLEYNQ--------FTISSVICACAGLAALIQ 254
+W+SM+ F N EE+ +L +E N T+ +V+ CA +
Sbjct: 255 SWNSMIRVFSDNGFSEESFLLLGEM----MEENGDGAFMPDVATLVTVLPVCAREREIGL 310
Query: 255 GKQVHAVLCKTGFGSNMFAASSLVDMYAKCGCVVDAYFVFSGIEEKNVVLWNTMISGFSR 314
GK VH K + ++L+DMY+KCGC+ +A +F KNVV WNTM+ GFS
Sbjct: 311 GKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSA 370
Query: 315 HARSVEVMILFEKMQQAG--LHPNEQTYISVLSACSH 349
+ + +M G + +E T ++ + C H
Sbjct: 371 EGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFH 407
>sp|Q9FI80|PP425_ARATH Pentatricopeptide repeat-containing protein At5g48910
OS=Arabidopsis thaliana GN=PCMP-H38 PE=2 SV=1
Length = 646
Score = 393 bits (1009), Expect = e-108, Method: Compositional matrix adjust.
Identities = 210/604 (34%), Positives = 336/604 (55%), Gaps = 59/604 (9%)
Query: 56 HAKIIGMGLNNDTLTSNILINFYSKCGL----ISGARKVFDEMPQRCIVSWNTIIGSYTT 111
HA I G DTL + ++ F + L + A K+F++MPQR SWNTII ++
Sbjct: 43 HAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFSWNTIIRGFSE 102
Query: 112 NGREQE--AVALFINMLREGKTPYSEFTVSSVLCACAAKRDVFECKQLHVFALKAAMDRN 169
+ ++ A+ LF M+ + + FT SVL ACA + E KQ+H ALK +
Sbjct: 103 SDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKYGFGGD 162
Query: 170 VFVGTALLDVYAKCGLISD----------------------------------------- 188
FV + L+ +Y CG + D
Sbjct: 163 EFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLG 222
Query: 189 ----ASRVFESMPERNEVTWSSMVAGFVQNELYEEALILFRRAQVLGLEYNQFTISSVIC 244
A +F+ M +R+ V+W++M++G+ N +++A+ +FR + + N T+ SV+
Sbjct: 223 DCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLP 282
Query: 245 ACAGLAALIQGKQVHAVLCKTGFGSNMFAASSLVDMYAKCGCVVDAYFVFSGIEEKNVVL 304
A + L +L G+ +H +G + S+L+DMY+KCG + A VF + +NV+
Sbjct: 283 AISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVIT 342
Query: 305 WNTMISGFSRHARSVEVMILFEKMQQAGLHPNEQTYISVLSACSHIGMVEKGKSYFDLMV 364
W+ MI+GF+ H ++ + + F KM+QAG+ P++ YI++L+ACSH G+VE+G+ YF MV
Sbjct: 343 WSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMV 402
Query: 365 KQHNVLPNVFHYSCMIDILGRAGLIHEAYDLILNMPFDATASMWGSLLASCRNYRNLELA 424
+ P + HY CM+D+LGR+GL+ EA + ILNMP +W +LL +CR N+E+
Sbjct: 403 SVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQGNVEMG 462
Query: 425 EIAAKQLFGMEPDNAGNHLLLSNIYAANRRWEEVARARKLIRDSEVKKEKSKSWVEIKG- 483
+ A L M P ++G ++ LSN+YA+ W EV+ R +++ +++K+ S ++I G
Sbjct: 463 KRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKDPGCSLIDIDGV 522
Query: 484 -------KRNHPRIAEIYSKLEKLVEEMKKLGYKPETEHDLHDVEDSRKQELLIHHSEKL 536
+HP+ EI S L ++ ++++ GY+P T L ++E+ K+ +L +HSEK+
Sbjct: 523 LHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYRPITTQVLLNLEEEDKENVLHYHSEKI 582
Query: 537 ALTFGLMCLCPGVPIRIMKNLRICGDCHSFMKFASRIAGRETIVRDLNRFHHFTNGSCSC 596
A FGL+ PG PIRI+KNLRIC DCHS +K S++ R+ VRD RFHHF +GSCSC
Sbjct: 583 ATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLISKVYKRKITVRDRKRFHHFQDGSCSC 642
Query: 597 WDFW 600
D+W
Sbjct: 643 MDYW 646
Score = 116 bits (291), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 147/317 (46%), Gaps = 56/317 (17%)
Query: 149 RDVFECKQLHVFALKAAMDRNVFVGTALLDVYAKCGL----ISDASRVFESMPERNEVTW 204
R + + Q+H +K+ R+ +L A L + A ++F MP+RN +W
Sbjct: 34 RTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFSW 93
Query: 205 SSMVAGFVQNELYEEALI----LFRRAQVLGLEYNQFTISSVICACAGLAALIQGKQVHA 260
++++ GF +++ ++ALI + +E N+FT SV+ ACA + +GKQ+H
Sbjct: 94 NTIIRGFSESD-EDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHG 152
Query: 261 VLCKTGFGSNMFAASSLVDMYAKCG----------------------------------- 285
+ K GFG + F S+LV MY CG
Sbjct: 153 LALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWN 212
Query: 286 CVVDAY----------FVFSGIEEKNVVLWNTMISGFSRHARSVEVMILFEKMQQAGLHP 335
++D Y +F + +++VV WNTMISG+S + + + +F +M++ + P
Sbjct: 213 VMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRP 272
Query: 336 NEQTYISVLSACSHIGMVEKGKSYFDLMVKQHNVLPNVFHYSCMIDILGRAGLIHEAYDL 395
N T +SVL A S +G +E G+ + L + + + S +ID+ + G+I +A +
Sbjct: 273 NYVTLVSVLPAISRLGSLELGE-WLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHV 331
Query: 396 ILNMPFDATASMWGSLL 412
+P + + W +++
Sbjct: 332 FERLPRENVIT-WSAMI 347
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 90/178 (50%), Gaps = 5/178 (2%)
Query: 35 TLQATLQSCARERAPVRGKVCHAKIIGMGLNNDTLTSNILINFYSKCGLISGARKVFDEM 94
TL + L + +R + G+ H G+ D + + LI+ YSKCG+I A VF+ +
Sbjct: 276 TLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERL 335
Query: 95 PQRCIVSWNTIIGSYTTNGREQEAVALFINMLREGKTPYSEFTVSSVLCACAAKRDVFEC 154
P+ +++W+ +I + +G+ +A+ F M + G P S+ ++L AC+ V E
Sbjct: 336 PRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRP-SDVAYINLLTACSHGGLVEEG 394
Query: 155 KQL--HVFALKAAMDRNVFVGTALLDVYAKCGLISDASRVFESMP-ERNEVTWSSMVA 209
++ + ++ R G ++D+ + GL+ +A +MP + ++V W +++
Sbjct: 395 RRYFSQMVSVDGLEPRIEHYG-CMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLG 451
>sp|Q9M2Y7|PP274_ARATH Pentatricopeptide repeat-containing protein At3g49710
OS=Arabidopsis thaliana GN=PCMP-H79 PE=2 SV=1
Length = 721
Score = 393 bits (1009), Expect = e-108, Method: Compositional matrix adjust.
Identities = 213/565 (37%), Positives = 343/565 (60%), Gaps = 18/565 (3%)
Query: 53 KVCHAKIIGMGLNNDTLTSNILINFYSKCGLISGARKVFDEMPQ-RCIVSWNTIIGSYTT 111
K H + G ++ + +N + +YSK GL+ A VF M + R VSWN++I +Y
Sbjct: 158 KQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQ 217
Query: 112 NGREQEAVALFINMLREGKTPYSEFTVSSVLCACAAKRDVFECKQLHVFALKAAMDRNVF 171
+ +A+AL+ M+ +G FT++SVL A + + +Q H +KA +N
Sbjct: 218 HKEGAKALALYKEMIFKG-FKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSH 276
Query: 172 VGTALLDVYAKCGL---ISDASRVFESMPERNEVTWSSMVAGFVQNE-LYEEALILFRRA 227
VG+ L+D Y+KCG + D+ +VF+ + + V W++M++G+ NE L EEA+ FR+
Sbjct: 277 VGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQM 336
Query: 228 QVLGLEYNQFTISSVICACAGLAALIQGKQVHAVLCKTGFGSNMFAAS-SLVDMYAKCGC 286
Q +G + + V AC+ L++ Q KQ+H + K+ SN + + +L+ +Y K G
Sbjct: 337 QRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGN 396
Query: 287 VVDAYFVFSGIEEKNVVLWNTMISGFSRHARSVEVMILFEKMQQAGLHPNEQTYISVLSA 346
+ DA +VF + E N V +N MI G+++H E ++L+++M +G+ PN+ T+++VLSA
Sbjct: 397 LQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSA 456
Query: 347 CSHIGMVEKGKSYFDLMVKQHNVLPNVFHYSCMIDILGRAGLIHEAYDLILNMPFDATAS 406
C+H G V++G+ YF+ M + + P HYSCMID+LGRAG + EA I MP+ +
Sbjct: 457 CAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSV 516
Query: 407 MWGSLLASCRNYRNLELAEIAAKQLFGMEPDNAGNHLLLSNIYAANRRWEEVARARKLIR 466
W +LL +CR ++N+ LAE AA +L M+P A +++L+N+YA R+WEE+A RK +R
Sbjct: 517 AWAALLGACRKHKNMALAERAANELMVMQPLAATPYVMLANMYADARKWEEMASVRKSMR 576
Query: 467 DSEVKKEKSKSWVEIKGKRN--------HPRIAEIYSKLEKLVEEMKKLGYKPETEHDLH 518
++K+ SW+E+K K++ HP I E+ LE+++++MKK+GY + + +
Sbjct: 577 GKRIRKKPGCSWIEVKKKKHVFVAEDWSHPMIREVNEYLEEMMKKMKKVGYVMDKKWAMV 636
Query: 519 DVEDSRKQEL---LIHHSEKLALTFGLMCLCPGVPIRIMKNLRICGDCHSFMKFASRIAG 575
+++ + + L HHSEKLA+ FGLM G + ++KNLRICGDCH+ +KF S +AG
Sbjct: 637 KEDEAGEGDEEMRLGHHSEKLAVAFGLMSTRDGEELVVVKNLRICGDCHNAIKFMSAVAG 696
Query: 576 RETIVRDLNRFHHFTNGSCSCWDFW 600
RE IVRD RFH F +G CSC D+W
Sbjct: 697 REIIVRDNLRFHCFKDGKCSCGDYW 721
Score = 190 bits (483), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 127/410 (30%), Positives = 200/410 (48%), Gaps = 39/410 (9%)
Query: 27 NANATELSTLQATLQSCARERAPVRGKVCHAKIIGMGLNNDTLTSNILINFYSKCGLISG 86
N + T + L ER GK HA + + + T SN +N YSKCG +S
Sbjct: 2 NQTPWKFKTFRDLLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSY 61
Query: 87 -------------------------------ARKVFDEMPQRCIVSWNTIIGSYTTNGRE 115
AR++FDE+PQ VS+NT+I Y + RE
Sbjct: 62 ARAAFYSTEEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGY-ADARE 120
Query: 116 QEAVALFINMLREGKTPYSEFTVSSVLCACAAKRDVFECKQLHVFALKAAMDRNVFVGTA 175
A + +R+ FT+S ++ AC + D+ KQLH F++ D V A
Sbjct: 121 TFAAMVLFKRMRKLGFEVDGFTLSGLIAACCDRVDLI--KQLHCFSVSGGFDSYSSVNNA 178
Query: 176 LLDVYAKCGLISDASRVFESMPE-RNEVTWSSMVAGFVQNELYEEALILFRRAQVLGLEY 234
+ Y+K GL+ +A VF M E R+EV+W+SM+ + Q++ +AL L++ G +
Sbjct: 179 FVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKI 238
Query: 235 NQFTISSVICACAGLAALIQGKQVHAVLCKTGFGSNMFAASSLVDMYAKCG---CVVDAY 291
+ FT++SV+ A L LI G+Q H L K GF N S L+D Y+KCG + D+
Sbjct: 239 DMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSE 298
Query: 292 FVFSGIEEKNVVLWNTMISGFSRHAR-SVEVMILFEKMQQAGLHPNEQTYISVLSACSHI 350
VF I ++V+WNTMISG+S + S E + F +MQ+ G P++ +++ V SACS++
Sbjct: 299 KVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNL 358
Query: 351 GMVEKGKSYFDLMVKQHNVLPNVFHYSCMIDILGRAGLIHEAYDLILNMP 400
+ K L +K H + + +I + ++G + +A + MP
Sbjct: 359 SSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMP 408
Score = 115 bits (288), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 86/348 (24%), Positives = 160/348 (45%), Gaps = 44/348 (12%)
Query: 130 KTPYSEFTVSSVLCACAAKRDVFECKQLHVFALKAAMDRNVFVGTALLDVYAKCGLISD- 188
+TP+ T +L A+RD+F K LH +K+ + + ++ +++Y+KCG +S
Sbjct: 3 QTPWKFKTFRDLLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYA 62
Query: 189 ------------------------------ASRVFESMPERNEVTWSSMVAGFVQNELYE 218
A ++F+ +P+ + V+++++++G+
Sbjct: 63 RAAFYSTEEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETF 122
Query: 219 EALILFRRAQVLGLEYNQFTISSVICACAGLAALIQGKQVHAVLCKTGFGSNMFAASSLV 278
A++LF+R + LG E + FT+S +I AC LI KQ+H GF S ++ V
Sbjct: 123 AAMVLFKRMRKLGFEVDGFTLSGLIAACCDRVDLI--KQLHCFSVSGGFDSYSSVNNAFV 180
Query: 279 DMYAKCGCVVDAYFVFSGIEE-KNVVLWNTMISGFSRHARSVEVMILFEKMQQAGLHPNE 337
Y+K G + +A VF G++E ++ V WN+MI + +H + + L+++M G +
Sbjct: 181 TYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDM 240
Query: 338 QTYISVLSACSHIGMVEKGKSYFDLMVKQHNVLPNVFHYSCMIDILGRAGLIHEAYD--L 395
T SVL+A + + + G+ + ++K N S +ID + G YD
Sbjct: 241 FTLASVLNALTSLDHLIGGRQFHGKLIKA-GFHQNSHVGSGLIDFYSKCGGCDGMYDSEK 299
Query: 396 ILNMPFDATASMWGSLLASCRNYRNLELAEIAAK-----QLFGMEPDN 438
+ +W ++++ N EL+E A K Q G PD+
Sbjct: 300 VFQEILSPDLVVWNTMISGYS--MNEELSEEAVKSFRQMQRIGHRPDD 345
>sp|P0C899|PP271_ARATH Putative pentatricopeptide repeat-containing protein At3g49142
OS=Arabidopsis thaliana GN=PCMP-H77 PE=3 SV=1
Length = 686
Score = 392 bits (1007), Expect = e-108, Method: Compositional matrix adjust.
Identities = 211/579 (36%), Positives = 324/579 (55%), Gaps = 47/579 (8%)
Query: 35 TLQATLQSCARERAPVRGKVCHAKIIGMGLNNDTLTSNILINFYSKCGLISGARKVFDEM 94
T L++C+ V G+ H +GL++ N L++ Y KCG +S AR V DEM
Sbjct: 142 TFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEM 201
Query: 95 PQRCIVSWNTIIGSYTTNGREQEAVALFINMLREGKTPYSEFTVSSVLCACAAKRDVFEC 154
+R +VSWN+++ Y N R +A+ + M K + T++S+L A
Sbjct: 202 SRRDVVSWNSLVVGYAQNQRFDDALEVCREM-ESVKISHDAGTMASLLPA---------- 250
Query: 155 KQLHVFALKAAMDRNVFVGTALLDVYAKCGLISDASRVFESMPERNEVTWSSMVAGFVQN 214
+ NV +Y K +F M +++ V+W+ M+ +++N
Sbjct: 251 -------VSNTTTENV--------MYVK--------DMFFKMGKKSLVSWNVMIGVYMKN 287
Query: 215 ELYEEALILFRRAQVLGLEYNQFTISSVICACAGLAALIQGKQVHAVLCKTGFGSNMFAA 274
+ EA+ L+ R + G E + +I+SV+ AC +AL GK++H + + N+
Sbjct: 288 AMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLE 347
Query: 275 SSLVDMYAKCGCVVDAYFVFSGIEEKNVVLWNTMISGFSRHARSVEVMILFEKMQQAGLH 334
++L+DMYAKCGC+ A VF ++ ++VV W MIS + R + + LF K+Q +GL
Sbjct: 348 NALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLV 407
Query: 335 PNEQTYISVLSACSHIGMVEKGKSYFDLMVKQHNVLPNVFHYSCMIDILGRAGLIHEAYD 394
P+ +++ L+ACSH G++E+G+S F LM + + P + H +CM+D+LGRAG + EAY
Sbjct: 408 PDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYR 467
Query: 395 LILNMPFDATASMWGSLLASCRNYRNLELAEIAAKQLFGMEPDNAGNHLLLSNIYAANRR 454
I +M + +WG+LL +CR + + ++ +AA +LF + P+ +G ++LLSNIYA R
Sbjct: 468 FIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGR 527
Query: 455 WEEVARARKLIRDSEVKKEKSKSWVEIK--------GKRNHPRIAEIYSKLEKLVEEMKK 506
WEEV R +++ +KK S VE+ G R+HP+ EIY +L+ LV++MK+
Sbjct: 528 WEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKKMKE 587
Query: 507 LGYKPETEHDLHDVEDSRKQELLIHHSEKLALTFGLMCL-----CPGVPIRIMKNLRICG 561
LGY P++E LHDVE+ K+ L HSEKLA+ F LM IRI KNLRICG
Sbjct: 588 LGYVPDSESALHDVEEEDKETHLAVHSEKLAIVFALMNTKEEEEDSNNTIRITKNLRICG 647
Query: 562 DCHSFMKFASRIAGRETIVRDLNRFHHFTNGSCSCWDFW 600
DCH K S+I RE I+RD NRFH F G CSC D+W
Sbjct: 648 DCHVAAKLISQITSREIIIRDTNRFHVFRFGVCSCGDYW 686
Score = 151 bits (381), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 97/362 (26%), Positives = 179/362 (49%), Gaps = 36/362 (9%)
Query: 53 KVCHAKIIGMGLNNDTLTSNILINFYSKCGLISGARKVFDEMPQRCIVSWNTIIGSYTTN 112
+ H++II L ++ L+ Y+ ++ ARKVFDE+P+R ++ N +I SY N
Sbjct: 59 RTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNN 118
Query: 113 GREQEAVALFINMLREGKTPYSEFTVSSVLCACAAKRDVFECKQLHVFALKAAMDRNVFV 172
G E V +F M P +T VL AC+ + +++H A K + +FV
Sbjct: 119 GFYGEGVKVFGTMCGCNVRP-DHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFV 177
Query: 173 GTALLDVYAKCGLISDASRVFESMPERNEVTWSSMVAGFVQNELYEEALILFRRAQVLGL 232
G L+ +Y KCG +S+A V + M R+ V+W+S+V G+ QN+ +++AL + R + + +
Sbjct: 178 GNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKI 237
Query: 233 EYNQFTISSVICACAGLAALIQGKQVHAVLCKTGFGSNMFAASSLVDMYAKCGCVVDAYF 292
++ T++S++ A + T + M+ DM+ K G
Sbjct: 238 SHDAGTMASLLPAVS----------------NTTTENVMYVK----DMFFKMG------- 270
Query: 293 VFSGIEEKNVVLWNTMISGFSRHARSVEVMILFEKMQQAGLHPNEQTYISVLSACSHIGM 352
+K++V WN MI + ++A VE + L+ +M+ G P+ + SVL AC
Sbjct: 271 ------KKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSA 324
Query: 353 VEKGKSYFDLMVKQHNVLPNVFHYSCMIDILGRAGLIHEAYDLILNMPFDATASMWGSLL 412
+ GK +++ ++PN+ + +ID+ + G + +A D+ NM S W +++
Sbjct: 325 LSLGKKIHGY-IERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVS-WTAMI 382
Query: 413 AS 414
++
Sbjct: 383 SA 384
Score = 104 bits (260), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 143/304 (47%), Gaps = 15/304 (4%)
Query: 150 DVFECKQLHVFALKAAMDRNVFVGTALLDVYAKCGLISDASRVFESMPERNEVTWSSMVA 209
D+ + +H + + N +G L+ YA ++ A +VF+ +PERN + + M+
Sbjct: 54 DIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIR 113
Query: 210 GFVQNELYEEALILFRRAQVLGLEYNQFTISSVICACAGLAALIQGKQVHAVLCKTGFGS 269
+V N Y E + +F + + +T V+ AC+ ++ G+++H K G S
Sbjct: 114 SYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSS 173
Query: 270 NMFAASSLVDMYAKCGCVVDAYFVFSGIEEKNVVLWNTMISGFSRHARSVEVMILFEKMQ 329
+F + LV MY KCG + +A V + ++VV WN+++ G++++ R + + + +M+
Sbjct: 174 TLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREME 233
Query: 330 QAGLHPNEQTYISVLSACSHIGM--VEKGKSYFDLMVKQHNVLPNVFHYSCMIDILGRAG 387
+ + T S+L A S+ V K F M K+ V NV MI + +
Sbjct: 234 SVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNV-----MIGVYMKNA 288
Query: 388 LIHEAYDLILNMP---FDATASMWGSLLASCRNYRNLELAEIAAKQLFG-MEPDNAGNHL 443
+ EA +L M F+ A S+L +C + L L K++ G +E +L
Sbjct: 289 MPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSL----GKKIHGYIERKKLIPNL 344
Query: 444 LLSN 447
LL N
Sbjct: 345 LLEN 348
>sp|Q9ZVF4|PP140_ARATH Pentatricopeptide repeat-containing protein At2g01510,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H37 PE=3
SV=1
Length = 584
Score = 390 bits (1001), Expect = e-107, Method: Compositional matrix adjust.
Identities = 222/569 (39%), Positives = 326/569 (57%), Gaps = 15/569 (2%)
Query: 44 ARERAPVRGKVCHAKIIGMGLN-NDTLTSNILINFYSKCGLISGARKVFDEMPQRCIVSW 102
A P + K HA ++ G + ++L + +L N G + AR+VFDEM + I W
Sbjct: 19 ASSSKPKQLKKIHAIVLRTGFSEKNSLLTQLLENLVV-IGDMCYARQVFDEMHKPRIFLW 77
Query: 103 NTIIGSYTTNGREQEAVALFINMLREGKTPYSEFTVSSVLCACAAKRDVFECK-QLHVFA 161
NT+ Y N E++ L+ M G P EFT V+ A + D F C LH
Sbjct: 78 NTLFKGYVRNQLPFESLLLYKKMRDLGVRP-DEFTYPFVVKAISQLGD-FSCGFALHAHV 135
Query: 162 LKAAMDRNVFVGTALLDVYAKCGLISDASRVFESMPERNEVTWSSMVAGFVQNELYEEAL 221
+K V T L+ +Y K G +S A +FESM ++ V W++ +A VQ AL
Sbjct: 136 VKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIAL 195
Query: 222 ILFRRAQVLGLEYNQFTISSVICACAGLAALIQGKQVHAVLCKTGFGSNMFAASSLVDMY 281
F + ++++ FT+ S++ AC L +L G++++ K N+ ++ +DM+
Sbjct: 196 EYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMH 255
Query: 282 AKCGCVVDAYFVFSGIEEKNVVLWNTMISGFSRHARSVEVMILFEKMQQAGLHPNEQTYI 341
KCG A +F ++++NVV W+TMI G++ + S E + LF MQ GL PN T++
Sbjct: 256 LKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFL 315
Query: 342 SVLSACSHIGMVEKGKSYFDLMVKQH--NVLPNVFHYSCMIDILGRAGLIHEAYDLILNM 399
VLSACSH G+V +GK YF LMV+ + N+ P HY+CM+D+LGR+GL+ EAY+ I M
Sbjct: 316 GVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKM 375
Query: 400 PFDATASMWGSLLASCRNYRNLELAEIAAKQLFGMEPDNAGNHLLLSNIYAANRRWEEVA 459
P + +WG+LL +C +R++ L + A L PD H+LLSNIYAA +W+ V
Sbjct: 376 PVEPDTGIWGALLGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVD 435
Query: 460 RARKLIRDSEVKKEKSKSWVEIKGK--------RNHPRIAEIYSKLEKLVEEMKKLGYKP 511
+ R +R KK + S VE +GK ++HP+ IY KL++++++++K+GY P
Sbjct: 436 KVRSKMRKLGTKKVAAYSSVEFEGKIHFFNRGDKSHPQSKAIYEKLDEILKKIRKMGYVP 495
Query: 512 ETEHDLHDVEDSRKQELLIHHSEKLALTFGLMCLCPGVPIRIMKNLRICGDCHSFMKFAS 571
+T HDVE K+ L HHSEKLA+ FGL+ PG PIR+MKNLR C DCH+F KF S
Sbjct: 496 DTCSVFHDVEMEEKECSLSHHSEKLAIAFGLIKGRPGHPIRVMKNLRTCDDCHAFSKFVS 555
Query: 572 RIAGRETIVRDLNRFHHFTNGSCSCWDFW 600
+ E I+RD NRFHHF NG CSC +FW
Sbjct: 556 SLTSTEIIMRDKNRFHHFRNGVCSCKEFW 584
>sp|Q9LSL8|PP446_ARATH Pentatricopeptide repeat-containing protein At5g65570
OS=Arabidopsis thaliana GN=PCMP-H47 PE=2 SV=1
Length = 738
Score = 389 bits (998), Expect = e-107, Method: Compositional matrix adjust.
Identities = 204/553 (36%), Positives = 328/553 (59%), Gaps = 14/553 (2%)
Query: 57 AKIIGMGLNNDTLTSNILINFYSKCGLISGARKVFDEMPQRCIVSWNTIIGSYTTNGREQ 116
A I+G+ ++N + L++ Y K G A+ V D + ++ +V +I Y+ G +
Sbjct: 191 AVILGLEVSN-VFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDT 249
Query: 117 EAVALFINMLREGKTPYSEFTVSSVLCACAAKRDVFECKQLHVFALKAAMDRNVFVGTAL 176
EAV F +ML E P +E+T +SVL +C +D+ K +H +K+ + + T+L
Sbjct: 250 EAVKAFQSMLVEKVQP-NEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSL 308
Query: 177 LDVYAKCGLISDASRVFESMPERNEVTWSSMVAGFVQNELYEEALILFRRAQVLGLEYNQ 236
L +Y +C L+ D+ RVF+ + N+V+W+S+++G VQN E ALI FR+ ++ N
Sbjct: 309 LTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNS 368
Query: 237 FTISSVICACAGLAALIQGKQVHAVLCKTGFGSNMFAASSLVDMYAKCGCVVDAYFVFSG 296
FT+SS + C+ LA +G+Q+H ++ K GF + +A S L+D+Y KCGC A VF
Sbjct: 369 FTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDT 428
Query: 297 IEEKNVVLWNTMISGFSRHARSVEVMILFEKMQQAGLHPNEQTYISVLSACSHIGMVEKG 356
+ E +V+ NTMI ++++ E + LFE+M GL PN+ T +SVL AC++ +VE+G
Sbjct: 429 LSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNNSRLVEEG 488
Query: 357 KSYFDLMVKQHNVLPNVFHYSCMIDILGRAGLIHEAYDLILNMPFDATASMWGSLLASCR 416
FD K +L N HY+CM+D+LGRAG + EA +++ + +W +LL++C+
Sbjct: 489 CELFDSFRKDKIMLTND-HYACMVDLLGRAGRLEEA-EMLTTEVINPDLVLWRTLLSACK 546
Query: 417 NYRNLELAEIAAKQLFGMEPDNAGNHLLLSNIYAANRRWEEVARARKLIRDSEVKKEKSK 476
+R +E+AE +++ +EP + G +L+SN+YA+ +W V + ++D ++KK +
Sbjct: 547 VHRKVEMAERITRKILEIEPGDEGTLILMSNLYASTGKWNRVIEMKSKMKDMKLKKNPAM 606
Query: 477 SWVEIKGKR---------NHPRIAEIYSKLEKLVEEMKKLGYKPETEHDLHDVEDSRKQE 527
SWVEI + +HP +I LE+L+++ K LGY + D+E++ K+
Sbjct: 607 SWVEINKETHTFMAGDLFSHPNSEQILENLEELIKKSKDLGYVEDKSCVFQDMEETAKER 666
Query: 528 LLIHHSEKLALTFGLMCLCPGVPIRIMKNLRICGDCHSFMKFASRIAGRETIVRDLNRFH 587
L HSEKLA+ F + G IRI+KNLR+C DCHS++K SR+ RE I RD RFH
Sbjct: 667 SLHQHSEKLAIAFAVWRNVGG-SIRILKNLRVCVDCHSWIKIVSRVMKREIICRDSKRFH 725
Query: 588 HFTNGSCSCWDFW 600
HF +GSCSC D+W
Sbjct: 726 HFRDGSCSCGDYW 738
Score = 182 bits (461), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 111/349 (31%), Positives = 191/349 (54%), Gaps = 4/349 (1%)
Query: 40 LQSCARERAPVRGKVCHAKIIGMGLNNDTLTSNILINFYSKCGLISGARKVFDEMPQRCI 99
L+ C ER+ K A ++ G + ++ + L++ KCG I AR+VFD M +R I
Sbjct: 72 LRQCIDERSISGIKTIQAHMLKSGFPAE-ISGSKLVDASLKCGDIDYARQVFDGMSERHI 130
Query: 100 VSWNTIIGSYTTNGREQEAVALFINMLREGKTPYSEFTVSSVLCACAAKRDVFECKQLHV 159
V+WN++I + R +EAV ++ M+ P E+T+SSV A + E ++ H
Sbjct: 131 VTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLP-DEYTLSSVFKAFSDLSLEKEAQRSHG 189
Query: 160 FALKAAMD-RNVFVGTALLDVYAKCGLISDASRVFESMPERNEVTWSSMVAGFVQNELYE 218
A+ ++ NVFVG+AL+D+Y K G +A V + + E++ V ++++ G+ Q
Sbjct: 190 LAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDT 249
Query: 219 EALILFRRAQVLGLEYNQFTISSVICACAGLAALIQGKQVHAVLCKTGFGSNMFAASSLV 278
EA+ F+ V ++ N++T +SV+ +C L + GK +H ++ K+GF S + + +SL+
Sbjct: 250 EAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLL 309
Query: 279 DMYAKCGCVVDAYFVFSGIEEKNVVLWNTMISGFSRHARSVEVMILFEKMQQAGLHPNEQ 338
MY +C V D+ VF IE N V W ++ISG ++ R +I F KM + + PN
Sbjct: 310 TMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSF 369
Query: 339 TYISVLSACSHIGMVEKGKSYFDLMVKQHNVLPNVFHYSCMIDILGRAG 387
T S L CS++ M E+G+ ++ K + + + S +ID+ G+ G
Sbjct: 370 TLSSALRGCSNLAMFEEGRQIHGIVTK-YGFDRDKYAGSGLIDLYGKCG 417
Score = 136 bits (342), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 90/310 (29%), Positives = 151/310 (48%), Gaps = 11/310 (3%)
Query: 14 KSFSSSAIASASANANATELSTLQATLQSCARERAPVRGKVCHAKIIGMGLNNDTLTSNI 73
K+F S + N T + L SC + GK+ H ++ G + +
Sbjct: 253 KAFQSMLVEKVQPNE-----YTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTS 307
Query: 74 LINFYSKCGLISGARKVFD--EMPQRCIVSWNTIIGSYTTNGREQEAVALFINMLREGKT 131
L+ Y +C L+ + +VF E P + VSW ++I NGRE+ A+ F M+R+
Sbjct: 308 LLTMYLRCSLVDDSLRVFKCIEYPNQ--VSWTSLISGLVQNGREEMALIEFRKMMRDSIK 365
Query: 132 PYSEFTVSSVLCACAAKRDVFECKQLHVFALKAAMDRNVFVGTALLDVYAKCGLISDASR 191
P S FT+SS L C+ E +Q+H K DR+ + G+ L+D+Y KCG A
Sbjct: 366 PNS-FTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARL 424
Query: 192 VFESMPERNEVTWSSMVAGFVQNELYEEALILFRRAQVLGLEYNQFTISSVICACAGLAA 251
VF+++ E + ++ ++M+ + QN EAL LF R LGL+ N T+ SV+ AC
Sbjct: 425 VFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNNSRL 484
Query: 252 LIQGKQVHAVLCKTGFGSNMFAASSLVDMYAKCGCVVDAYFVFSGIEEKNVVLWNTMISG 311
+ +G ++ K + +VD+ + G + +A + + + ++VLW T++S
Sbjct: 485 VEEGCELFDSFRKDKIMLTNDHYACMVDLLGRAGRLEEAEMLTTEVINPDLVLWRTLLSA 544
Query: 312 FSRHARSVEV 321
H R VE+
Sbjct: 545 CKVH-RKVEM 553
Score = 125 bits (315), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 76/228 (33%), Positives = 123/228 (53%), Gaps = 2/228 (0%)
Query: 139 SSVLCACAAKRDVFECKQLHVFALKAAMDRNVFVGTALLDVYAKCGLISDASRVFESMPE 198
S +L C +R + K + LK+ + G+ L+D KCG I A +VF+ M E
Sbjct: 69 SQLLRQCIDERSISGIKTIQAHMLKSGFPAEI-SGSKLVDASLKCGDIDYARQVFDGMSE 127
Query: 199 RNEVTWSSMVAGFVQNELYEEALILFRRAQVLGLEYNQFTISSVICACAGLAALIQGKQV 258
R+ VTW+S++A +++ +EA+ ++R + +++T+SSV A + L+ + ++
Sbjct: 128 RHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKEAQRS 187
Query: 259 HAVLCKTGFG-SNMFAASSLVDMYAKCGCVVDAYFVFSGIEEKNVVLWNTMISGFSRHAR 317
H + G SN+F S+LVDMY K G +A V +EEK+VVL +I G+S+
Sbjct: 188 HGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGE 247
Query: 318 SVEVMILFEKMQQAGLHPNEQTYISVLSACSHIGMVEKGKSYFDLMVK 365
E + F+ M + PNE TY SVL +C ++ + GK LMVK
Sbjct: 248 DTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVK 295
Score = 69.3 bits (168), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 73/137 (53%), Gaps = 1/137 (0%)
Query: 256 KQVHAVLCKTGFGSNMFAASSLVDMYAKCGCVVDAYFVFSGIEEKNVVLWNTMISGFSRH 315
K + A + K+GF + + + S LVD KCG + A VF G+ E+++V WN++I+ +H
Sbjct: 85 KTIQAHMLKSGFPAEI-SGSKLVDASLKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKH 143
Query: 316 ARSVEVMILFEKMQQAGLHPNEQTYISVLSACSHIGMVEKGKSYFDLMVKQHNVLPNVFH 375
RS E + ++ M + P+E T SV A S + + ++ + L V + NVF
Sbjct: 144 RRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFV 203
Query: 376 YSCMIDILGRAGLIHEA 392
S ++D+ + G EA
Sbjct: 204 GSALVDMYVKFGKTREA 220
>sp|Q8LK93|PP145_ARATH Pentatricopeptide repeat-containing protein At2g02980
OS=Arabidopsis thaliana GN=PCMP-H26 PE=2 SV=2
Length = 603
Score = 387 bits (993), Expect = e-106, Method: Compositional matrix adjust.
Identities = 195/539 (36%), Positives = 326/539 (60%), Gaps = 13/539 (2%)
Query: 74 LINFYSKCGL---ISGARKVFDEMPQRCIVSWNTIIGSYTTNGREQEAVALFINMLREGK 130
LINF ++ +S AR +F+ M + IV +N++ Y+ E +LF+ +L +G
Sbjct: 66 LINFCTESPTESSMSYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGI 125
Query: 131 TPYSEFTVSSVLCACAAKRDVFECKQLHVFALKAAMDRNVFVGTALLDVYAKCGLISDAS 190
P +T S+L ACA + + E +QLH ++K +D NV+V L+++Y +C + A
Sbjct: 126 LP-DNYTFPSLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSAR 184
Query: 191 RVFESMPERNEVTWSSMVAGFVQNELYEEALILFRRAQVLGLEYNQFTISSVICACAGLA 250
VF+ + E V +++M+ G+ + EAL LFR Q L+ N+ T+ SV+ +CA L
Sbjct: 185 CVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLG 244
Query: 251 ALIQGKQVHAVLCKTGFGSNMFAASSLVDMYAKCGCVVDAYFVFSGIEEKNVVLWNTMIS 310
+L GK +H K F + ++L+DM+AKCG + DA +F + K+ W+ MI
Sbjct: 245 SLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIV 304
Query: 311 GFSRHARSVEVMILFEKMQQAGLHPNEQTYISVLSACSHIGMVEKGKSYFDLMVKQHNVL 370
++ H ++ + M++FE+M+ + P+E T++ +L+ACSH G VE+G+ YF MV + ++
Sbjct: 305 AYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIV 364
Query: 371 PNVFHYSCMIDILGRAGLIHEAYDLILNMPFDATASMWGSLLASCRNYRNLELAEIAAKQ 430
P++ HY M+D+L RAG + +AY+ I +P T +W LLA+C ++ NL+LAE +++
Sbjct: 365 PSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSER 424
Query: 431 LFGMEPDNAGNHLLLSNIYAANRRWEEVARARKLIRDSEVKKEKSKSWVEIK-------- 482
+F ++ + G++++LSN+YA N++WE V RK+++D + K S +E+
Sbjct: 425 IFELDDSHGGDYVILSNLYARNKKWEYVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFS 484
Query: 483 GKRNHPRIAEIYSKLEKLVEEMKKLGYKPETEHDLH-DVEDSRKQELLIHHSEKLALTFG 541
G +++ L+++V+E+K GY P+T +H ++ D K+ L +HSEKLA+TFG
Sbjct: 485 GDGVKSATTKLHRALDEMVKELKLSGYVPDTSMVVHANMNDQEKEITLRYHSEKLAITFG 544
Query: 542 LMCLCPGVPIRIMKNLRICGDCHSFMKFASRIAGRETIVRDLNRFHHFTNGSCSCWDFW 600
L+ PG IR++KNLR+C DCH+ K S I GR+ ++RD+ RFHHF +G CSC DFW
Sbjct: 545 LLNTPPGTTIRVVKNLRVCRDCHNAAKLISLIFGRKVVLRDVQRFHHFEDGKCSCGDFW 603
Score = 139 bits (350), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 153/283 (54%), Gaps = 3/283 (1%)
Query: 35 TLQATLQSCARERAPVRGKVCHAKIIGMGLNNDTLTSNILINFYSKCGLISGARKVFDEM 94
T + L++CA +A G+ H + +GL+++ LIN Y++C + AR VFD +
Sbjct: 131 TFPSLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRI 190
Query: 95 PQRCIVSWNTIIGSYTTNGREQEAVALFINMLREGKTPYSEFTVSSVLCACAAKRDVFEC 154
+ C+V +N +I Y R EA++LF M + P +E T+ SVL +CA +
Sbjct: 191 VEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKP-NEITLLSVLSSCALLGSLDLG 249
Query: 155 KQLHVFALKAAMDRNVFVGTALLDVYAKCGLISDASRVFESMPERNEVTWSSMVAGFVQN 214
K +H +A K + + V V TAL+D++AKCG + DA +FE M ++ WS+M+ + +
Sbjct: 250 KWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANH 309
Query: 215 ELYEEALILFRRAQVLGLEYNQFTISSVICACAGLAALIQGKQVHA-VLCKTGFGSNMFA 273
E+++++F R + ++ ++ T ++ AC+ + +G++ + ++ K G ++
Sbjct: 310 GKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKH 369
Query: 274 ASSLVDMYAKCGCVVDAY-FVFSGIEEKNVVLWNTMISGFSRH 315
S+VD+ ++ G + DAY F+ +LW +++ S H
Sbjct: 370 YGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSH 412
>sp|Q9FND6|PP411_ARATH Pentatricopeptide repeat-containing protein At5g40410,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H15 PE=2
SV=1
Length = 608
Score = 386 bits (991), Expect = e-106, Method: Compositional matrix adjust.
Identities = 207/601 (34%), Positives = 346/601 (57%), Gaps = 18/601 (2%)
Query: 11 FYYKSFSSSAIASASANANATELSTLQATLQSCARERAPVRGKVCHAKIIGMGLNNDTLT 70
Y + F S + S +AN +S+L A ++SC ++ H K++
Sbjct: 15 LYRRRFLSQSSFVHSLDAN---VSSLIAAVKSCVSIELC---RLLHCKVVKSVSYRHGFI 68
Query: 71 SNILINFYSKCGLISGARKVFDEMPQRCIVSWNTIIGSYTTNGREQEAVALFINML--RE 128
+ L+ Y + G A K+FDEMP+R +VSWN++I Y+ G + + M+
Sbjct: 69 GDQLVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEV 128
Query: 129 GKTPYSEFTVSSVLCACAAKRDVFECKQLHVFALKAAMDRNVFVGTALLDVYAKCGLISD 188
G P +E T S++ AC E + +H +K + V V A ++ Y K G ++
Sbjct: 129 GFRP-NEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTS 187
Query: 189 ASRVFESMPERNEVTWSSMVAGFVQNELYEEALILFRRAQVLGLEYNQFTISSVICACAG 248
+ ++FE + +N V+W++M+ +QN L E+ L F ++ +G E +Q T +V+ +C
Sbjct: 188 SCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCED 247
Query: 249 LAALIQGKQVHAVLCKTGFGSNMFAASSLVDMYAKCGCVVDAYFVFSGIEEKNVVLWNTM 308
+ + + +H ++ GF N ++L+D+Y+K G + D+ VF I + + W M
Sbjct: 248 MGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAM 307
Query: 309 ISGFSRHARSVEVMILFEKMQQAGLHPNEQTYISVLSACSHIGMVEKGKSYFDLMVKQHN 368
++ ++ H + + FE M G+ P+ T+ +L+ACSH G+VE+GK YF+ M K++
Sbjct: 308 LAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYR 367
Query: 369 VLPNVFHYSCMIDILGRAGLIHEAYDLILNMPFDATASMWGSLLASCRNYRNLELAEIAA 428
+ P + HYSCM+D+LGR+GL+ +AY LI MP + ++ +WG+LL +CR Y++ +L AA
Sbjct: 368 IDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAA 427
Query: 429 KQLFGMEPDNAGNHLLLSNIYAANRRWEEVARARKLIRDSEVKKEKSKSWVE-------- 480
++LF +EP + N+++LSNIY+A+ W++ +R R L++ + + S++E
Sbjct: 428 ERLFELEPRDGRNYVMLSNIYSASGLWKDASRIRNLMKQKGLVRASGCSYIEHGNKIHKF 487
Query: 481 IKGKRNHPRIAEIYSKLEKLVEEMK-KLGYKPETEHDLHDVEDSRKQELLIHHSEKLALT 539
+ G +HP +I KL+++ ++MK ++GYK +TE LHDV + K+E++ HSEK+A+
Sbjct: 488 VVGDWSHPESEKIQKKLKEIRKKMKSEMGYKSKTEFVLHDVGEDVKEEMINQHSEKIAMA 547
Query: 540 FGLMCLCPGVPIRIMKNLRICGDCHSFMKFASRIAGRETIVRDLNRFHHFTNGSCSCWDF 599
FGL+ + P PI I KNLRICGDCH K S I R I+RD RFHHF +GSCSC D+
Sbjct: 548 FGLLVVSPMEPIIIRKNLRICGDCHETAKAISLIEKRRIIIRDSKRFHHFLDGSCSCSDY 607
Query: 600 W 600
W
Sbjct: 608 W 608
>sp|Q0WQW5|PPR85_ARATH Pentatricopeptide repeat-containing protein At1g59720,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H51 PE=2
SV=2
Length = 638
Score = 384 bits (985), Expect = e-105, Method: Compositional matrix adjust.
Identities = 205/541 (37%), Positives = 316/541 (58%), Gaps = 25/541 (4%)
Query: 84 ISGARKVFDEMPQRCIVSWNTIIGSYTTN-GREQEAVALFINMLREGKTPYSEFTVSSVL 142
++ A +VFD + WNT+I + + R++EA L+ ML G++ + T VL
Sbjct: 99 VNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVL 158
Query: 143 CACAAKRDVFECKQLHVFALKAAMDRNVFVGTALLDVYAKCGLISDASRVFESMPERNEV 202
ACA E KQ+H +K +V+V L+ +Y CG + A +VF+ MPER+ V
Sbjct: 159 KACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLV 218
Query: 203 TWSSMVAGFVQNELYEEALILFRRAQVLGLEYNQFTISSVICACAGLAALIQGKQVHAVL 262
+W+SM+ V+ Y+ AL LFR Q E + +T+ SV+ ACAGL +L G HA L
Sbjct: 219 SWNSMIDALVRFGEYDSALQLFREMQ-RSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFL 277
Query: 263 ---CKTGFGSNMFAASSLVDMYAKCGCVVDAYFVFSGIEEKNVVLWNTMISGFSRHARSV 319
C ++ +SL++MY KCG + A VF G++++++ WN MI GF+ H R+
Sbjct: 278 LRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAE 337
Query: 320 EVMILFEKM--QQAGLHPNEQTYISVLSACSHIGMVEKGKSYFDLMVKQHNVLPNVFHYS 377
E M F++M ++ + PN T++ +L AC+H G V KG+ YFD+MV+ + + P + HY
Sbjct: 338 EAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYG 397
Query: 378 CMIDILGRAGLIHEAYDLILNMPFDATASMWGSLL-ASCRNYRNLELAEIAAKQLFGMEP 436
C++D++ RAG I EA D++++MP A +W SLL A C+ ++EL+E A+ + G +
Sbjct: 398 CIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKE 457
Query: 437 DN-------AGNHLLLSNIYAANRRWEEVARARKLIRDSEVKKEKSKSWVEIKG------ 483
DN +G ++LLS +YA+ RW +V RKL+ + ++KE S +EI G
Sbjct: 458 DNESSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSSIEINGISHEFF 517
Query: 484 --KRNHPRIAEIYSKLEKLVEEMKKLGYKPE-TEHDLHD-VEDSRKQELLIHHSEKLALT 539
+HP+ +IY +L+ + + ++ +GY P+ ++ L D D K+ L HSE+LA+
Sbjct: 518 AGDTSHPQTKQIYQQLKVIDDRLRSIGYLPDRSQAPLVDATNDGSKEYSLRLHSERLAIA 577
Query: 540 FGLMCLCPGVPIRIMKNLRICGDCHSFMKFASRIAGRETIVRDLNRFHHFTNGSCSCWDF 599
FGL+ L P PIRI KNLR+C DCH K S++ E IVRD RFHHF +GSCSC D+
Sbjct: 578 FGLINLPPQTPIRIFKNLRVCNDCHEVTKLISKVFNTEIIVRDRVRFHHFKDGSCSCLDY 637
Query: 600 W 600
W
Sbjct: 638 W 638
Score = 132 bits (333), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 89/296 (30%), Positives = 146/296 (49%), Gaps = 13/296 (4%)
Query: 35 TLQATLQSCARERAPVRGKVCHAKIIGMGLNNDTLTSNILINFYSKCGLISGARKVFDEM 94
T L++CA GK H +I+ G D +N LI+ Y CG + ARKVFDEM
Sbjct: 153 TFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEM 212
Query: 95 PQRCIVSWNTIIGSYTTNGREQEAVALFINMLREGKTPYSEFTVSSVLCACAAKRDVFEC 154
P+R +VSWN++I + G A+ LF M R + +T+ SVL ACA +
Sbjct: 213 PERSLVSWNSMIDALVRFGEYDSALQLFREMQRSFEP--DGYTMQSVLSACAGLGSLSLG 270
Query: 155 KQLHVFALK-----AAMDRNVFVGTALLDVYAKCGLISDASRVFESMPERNEVTWSSMVA 209
H F L+ AMD V V +L+++Y KCG + A +VF+ M +R+ +W++M+
Sbjct: 271 TWAHAFLLRKCDVDVAMD--VLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMIL 328
Query: 210 GFVQNELYEEALILFRRA--QVLGLEYNQFTISSVICACAGLAALIQGKQVHAVLCKT-G 266
GF + EEA+ F R + + N T ++ AC + +G+Q ++ +
Sbjct: 329 GFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYC 388
Query: 267 FGSNMFAASSLVDMYAKCGCVVDAY-FVFSGIEEKNVVLWNTMISGFSRHARSVEV 321
+ +VD+ A+ G + +A V S + + V+W +++ + SVE+
Sbjct: 389 IEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVEL 444
Score = 107 bits (266), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 129/270 (47%), Gaps = 18/270 (6%)
Query: 99 IVSWNTIIGSYTTNGREQEAVALFINMLREGKTPYSEFTVSS-------VLCACAAKRDV 151
IVS T I Y ++ L ++ L P S + S+ + D+
Sbjct: 7 IVSPPTTITYY-----HPMSIGLLVHPLSPHIPPASSPSASTAGNHHQRIFSLAETCSDM 61
Query: 152 FECKQLHVFALKAAMDR---NVFVGTALLDVYAKCGLISDASRVFESMPERNEVTWSSMV 208
+ KQLH F L+ +F+ +L + + ++ A RVF+S+ + W++++
Sbjct: 62 SQLKQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFDSIENHSSFMWNTLI 121
Query: 209 AGFVQN-ELYEEALILFRRAQVLG-LEYNQFTISSVICACAGLAALIQGKQVHAVLCKTG 266
+ EEA +L+R+ G ++ T V+ ACA + +GKQVH + K G
Sbjct: 122 RACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHG 181
Query: 267 FGSNMFAASSLVDMYAKCGCVVDAYFVFSGIEEKNVVLWNTMISGFSRHARSVEVMILFE 326
FG +++ + L+ +Y CGC+ A VF + E+++V WN+MI R + LF
Sbjct: 182 FGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFR 241
Query: 327 KMQQAGLHPNEQTYISVLSACSHIGMVEKG 356
+MQ++ P+ T SVLSAC+ +G + G
Sbjct: 242 EMQRS-FEPDGYTMQSVLSACAGLGSLSLG 270
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 101/218 (46%), Gaps = 19/218 (8%)
Query: 239 ISSVICACAGLAALIQGKQVHAVLCKTGFG---SNMFAASSLVDMYAKCGCVVDAYFVFS 295
I S+ C+ ++ L KQ+HA +T + + +F ++ + + V A+ VF
Sbjct: 51 IFSLAETCSDMSQL---KQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFD 107
Query: 296 GIEEKNVVLWNTMISGFSRH-ARSVEVMILFEKMQQAG-LHPNEQTYISVLSACSHIGMV 353
IE + +WNT+I + +R E +L+ KM + G P++ T+ VL AC++I
Sbjct: 108 SIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGF 167
Query: 354 EKGKSYFDLMVKQHNVLPNVFHYSCMIDILGRAGLIHEAYDLILNMPFDATASMWGSLLA 413
+GK +VK H +V+ + +I + G G + A + MP + S W S++
Sbjct: 168 SEGKQVHCQIVK-HGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVS-WNSMID 225
Query: 414 SCRNYRNLELAEIAAKQLF-----GMEPDNAGNHLLLS 446
+ + + +A QLF EPD +LS
Sbjct: 226 ALVRFGEYD----SALQLFREMQRSFEPDGYTMQSVLS 259
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.134 0.407
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 210,413,717
Number of Sequences: 539616
Number of extensions: 8465140
Number of successful extensions: 36515
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 360
Number of HSP's successfully gapped in prelim test: 98
Number of HSP's that attempted gapping in prelim test: 30208
Number of HSP's gapped (non-prelim): 2050
length of query: 600
length of database: 191,569,459
effective HSP length: 123
effective length of query: 477
effective length of database: 125,196,691
effective search space: 59718821607
effective search space used: 59718821607
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 64 (29.3 bits)