Query 007532
Match_columns 599
No_of_seqs 181 out of 901
Neff 7.1
Searched_HMMs 46136
Date Thu Mar 28 11:53:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007532.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/007532hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02620 indole-3-acetic acid- 100.0 3E-136 5E-141 1125.9 58.0 584 13-598 15-607 (612)
2 PLN02247 indole-3-acetic acid- 100.0 3E-132 7E-137 1095.9 56.7 579 17-597 8-603 (606)
3 PLN02249 indole-3-acetic acid- 100.0 5E-126 1E-130 1056.1 58.0 591 1-598 1-596 (597)
4 PF03321 GH3: GH3 auxin-respon 100.0 1E-113 3E-118 955.4 44.5 515 22-575 2-528 (528)
5 COG1541 PaaK Coenzyme F390 syn 100.0 5.5E-30 1.2E-34 272.8 25.7 400 25-572 14-436 (438)
6 TIGR03335 F390_ftsA coenzyme F 100.0 3E-27 6.6E-32 259.4 26.2 397 27-547 7-431 (445)
7 TIGR02155 PA_CoA_ligase phenyl 99.9 8.7E-24 1.9E-28 230.1 32.1 387 31-547 6-410 (422)
8 TIGR02304 aden_form_hyp probab 99.9 1E-20 2.2E-25 205.6 27.5 315 31-491 22-375 (430)
9 COG1021 EntE Peptide arylation 99.6 3.5E-15 7.5E-20 154.7 10.0 134 303-459 303-458 (542)
10 TIGR02188 Ac_CoA_lig_AcsA acet 99.4 3.6E-10 7.9E-15 129.2 32.9 251 277-579 337-624 (625)
11 PRK00174 acetyl-CoA synthetase 99.4 3.3E-10 7.3E-15 129.9 32.3 230 306-581 368-633 (637)
12 PRK06334 long chain fatty acid 99.4 4.6E-11 9.9E-16 134.4 23.0 152 277-460 280-455 (539)
13 PTZ00237 acetyl-CoA synthetase 99.4 1.9E-10 4.2E-15 132.4 28.0 130 305-459 380-536 (647)
14 PRK05605 long-chain-fatty-acid 99.4 6.5E-11 1.4E-15 133.7 22.4 151 277-459 317-489 (573)
15 PRK07529 AMP-binding domain pr 99.3 3.8E-10 8.3E-15 129.5 27.8 134 306-459 334-489 (632)
16 PRK07788 acyl-CoA synthetase; 99.3 3.6E-10 7.9E-15 127.0 26.4 151 277-459 302-471 (549)
17 PRK06060 acyl-CoA synthetase; 99.3 1.2E-10 2.5E-15 135.3 23.0 148 277-459 243-409 (705)
18 PRK10524 prpE propionyl-CoA sy 99.3 8.6E-10 1.9E-14 126.3 28.9 131 305-459 355-517 (629)
19 PRK09274 peptide synthase; Pro 99.3 1.4E-10 3.1E-15 130.3 21.4 160 277-459 269-464 (552)
20 PRK05677 long-chain-fatty-acid 99.3 3.1E-10 6.7E-15 128.1 24.2 128 307-459 328-477 (562)
21 PLN02574 4-coumarate--CoA liga 99.3 8.3E-10 1.8E-14 124.6 27.6 131 307-459 321-474 (560)
22 PLN02654 acetate-CoA ligase 99.3 3.8E-09 8.3E-14 122.1 33.4 250 277-579 376-662 (666)
23 PRK04319 acetyl-CoA synthetase 99.3 1.1E-09 2.4E-14 123.8 28.2 152 277-460 302-477 (570)
24 PRK07514 malonyl-CoA synthase; 99.3 3.3E-10 7.2E-15 125.4 23.3 129 307-459 271-421 (504)
25 PRK06187 long-chain-fatty-acid 99.3 1.2E-09 2.7E-14 120.9 27.2 149 277-459 262-439 (521)
26 PRK03584 acetoacetyl-CoA synth 99.3 1.1E-09 2.3E-14 126.2 26.7 232 303-579 381-648 (655)
27 PRK13295 cyclohexanecarboxylat 99.3 2.2E-10 4.7E-15 128.8 20.5 128 307-459 314-463 (547)
28 PRK06155 crotonobetaine/carnit 99.3 6.1E-10 1.3E-14 125.3 22.8 128 307-459 296-444 (542)
29 TIGR02316 propion_prpE propion 99.2 6.5E-09 1.4E-13 119.2 31.2 131 305-459 354-516 (628)
30 PRK06839 acyl-CoA synthetase; 99.2 9.7E-10 2.1E-14 121.3 23.3 148 277-459 245-415 (496)
31 PRK06164 acyl-CoA synthetase; 99.2 3E-09 6.4E-14 119.2 27.4 149 277-459 276-450 (540)
32 PRK07656 long-chain-fatty-acid 99.2 1.7E-09 3.7E-14 119.8 24.8 151 276-459 261-436 (513)
33 PRK06145 acyl-CoA synthetase; 99.2 2.4E-10 5.3E-15 126.4 17.6 151 277-460 245-418 (497)
34 PRK07470 acyl-CoA synthetase; 99.2 1.8E-09 4E-14 120.5 24.8 149 277-459 261-438 (528)
35 TIGR01217 ac_ac_CoA_syn acetoa 99.2 5.8E-09 1.3E-13 120.3 29.4 228 304-579 383-646 (652)
36 PRK09088 acyl-CoA synthetase; 99.2 6.3E-10 1.4E-14 122.9 20.4 130 306-459 253-405 (488)
37 TIGR03205 pimA dicarboxylate-- 99.2 3.2E-10 6.9E-15 127.2 18.2 130 307-459 314-465 (541)
38 PRK04813 D-alanine--poly(phosp 99.2 2E-09 4.3E-14 118.9 24.0 128 307-459 262-419 (503)
39 TIGR01734 D-ala-DACP-lig D-ala 99.2 2.5E-09 5.4E-14 118.4 24.7 129 307-460 260-418 (502)
40 TIGR01733 AA-adenyl-dom amino 99.2 7.1E-10 1.5E-14 119.0 19.5 148 276-459 217-399 (408)
41 TIGR02275 DHB_AMP_lig 2,3-dihy 99.2 3.7E-09 8E-14 118.3 25.8 150 277-459 280-452 (527)
42 TIGR03208 cyc_hxne_CoA_lg cycl 99.2 3.1E-09 6.8E-14 119.1 25.2 127 307-459 312-461 (538)
43 PRK05852 acyl-CoA synthetase; 99.2 2.8E-09 6.1E-14 119.4 24.7 153 277-459 274-452 (534)
44 PRK10946 entE enterobactin syn 99.2 6.1E-10 1.3E-14 125.0 19.3 128 307-459 302-453 (536)
45 PRK07638 acyl-CoA synthetase; 99.2 1.8E-09 3.9E-14 119.3 22.0 129 307-459 256-405 (487)
46 PRK07867 acyl-CoA synthetase; 99.2 8E-09 1.7E-13 116.0 27.5 127 307-459 269-425 (529)
47 PRK07059 Long-chain-fatty-acid 99.2 4E-10 8.7E-15 126.9 17.0 129 306-459 328-479 (557)
48 PRK08974 long-chain-fatty-acid 99.2 2.2E-09 4.8E-14 120.9 23.0 128 307-459 327-476 (560)
49 PRK08316 acyl-CoA synthetase; 99.2 6.2E-10 1.3E-14 123.6 18.1 130 306-459 287-439 (523)
50 PLN02246 4-coumarate--CoA liga 99.2 5.5E-09 1.2E-13 117.1 25.8 131 306-459 299-456 (537)
51 PRK07786 long-chain-fatty-acid 99.2 6.6E-10 1.4E-14 124.8 18.3 129 307-459 292-443 (542)
52 PRK08633 2-acyl-glycerophospho 99.2 1.9E-09 4.1E-14 131.4 23.7 130 307-460 900-1064(1146)
53 PRK08314 long-chain-fatty-acid 99.2 1E-09 2.3E-14 122.9 19.8 129 307-459 307-460 (546)
54 PRK12583 acyl-CoA synthetase; 99.2 9.3E-09 2E-13 115.5 27.1 129 307-459 319-472 (558)
55 PRK12492 long-chain-fatty-acid 99.2 1.2E-08 2.7E-13 115.1 28.0 129 306-459 334-485 (562)
56 COG0318 CaiC Acyl-CoA syntheta 99.2 6.2E-10 1.3E-14 125.3 17.2 153 276-460 270-446 (534)
57 PRK13383 acyl-CoA synthetase; 99.2 1E-08 2.2E-13 114.5 26.5 128 307-459 294-440 (516)
58 PLN02860 o-succinylbenzoate-Co 99.2 1.1E-09 2.3E-14 123.9 18.9 142 307-459 290-458 (563)
59 PRK10252 entF enterobactin syn 99.2 4.3E-10 9.2E-15 138.9 16.7 129 307-460 719-882 (1296)
60 PRK13382 acyl-CoA synthetase; 99.1 1.5E-08 3.3E-13 113.9 27.5 128 307-459 314-460 (537)
61 PLN03051 acyl-activating enzym 99.1 2.3E-09 5.1E-14 119.3 20.5 43 413-459 359-401 (499)
62 PLN02736 long-chain acyl-CoA s 99.1 2E-09 4.4E-14 123.9 20.2 132 307-459 378-532 (651)
63 TIGR03098 ligase_PEP_1 acyl-Co 99.1 4.7E-09 1E-13 116.4 21.9 129 307-459 276-438 (515)
64 PRK06710 long-chain-fatty-acid 99.1 1.4E-09 3E-14 122.6 17.9 129 307-459 325-475 (563)
65 PRK12406 long-chain-fatty-acid 99.1 1.9E-08 4E-13 111.9 26.4 129 306-459 272-423 (509)
66 PRK08751 putative long-chain f 99.1 1.1E-09 2.3E-14 123.4 16.7 129 307-460 331-482 (560)
67 COG0365 Acs Acyl-coenzyme A sy 99.1 1.2E-08 2.6E-13 113.7 24.5 130 303-459 288-440 (528)
68 PLN02614 long-chain acyl-CoA s 99.1 2.6E-09 5.6E-14 123.5 20.0 132 307-459 388-541 (666)
69 PLN02330 4-coumarate--CoA liga 99.1 2.7E-09 5.8E-14 120.0 19.5 130 307-459 305-461 (546)
70 PRK12467 peptide synthase; Pro 99.1 2.7E-09 5.9E-14 143.9 22.8 129 307-459 3353-3515(3956)
71 PRK08315 AMP-binding domain pr 99.1 1.8E-08 3.8E-13 113.4 25.7 130 307-459 317-471 (559)
72 PRK12467 peptide synthase; Pro 99.1 3.7E-09 8.1E-14 142.6 23.3 148 277-459 754-934 (3956)
73 PRK07787 acyl-CoA synthetase; 99.1 5.6E-09 1.2E-13 115.1 20.7 129 307-459 243-395 (471)
74 TIGR03443 alpha_am_amid L-amin 99.1 1.7E-09 3.7E-14 134.7 18.2 43 413-459 680-722 (1389)
75 PRK06188 acyl-CoA synthetase; 99.1 3.4E-08 7.5E-13 110.2 26.0 129 306-459 282-437 (524)
76 PLN02861 long-chain-fatty-acid 99.0 2.9E-09 6.2E-14 123.0 16.5 132 307-459 385-538 (660)
77 PTZ00342 acyl-CoA synthetase; 99.0 8.4E-09 1.8E-13 120.5 20.5 130 307-459 463-615 (746)
78 PRK03640 O-succinylbenzoic aci 99.0 2.9E-08 6.3E-13 109.3 23.7 146 277-459 236-404 (483)
79 PRK07768 long-chain-fatty-acid 99.0 7.9E-08 1.7E-12 107.9 27.5 64 393-460 380-459 (545)
80 PLN03052 acetate--CoA ligase; 99.0 6E-08 1.3E-12 113.3 27.4 43 413-459 591-633 (728)
81 PRK06087 short chain acyl-CoA 99.0 1.1E-08 2.3E-13 115.0 20.2 128 306-459 303-454 (547)
82 KOG1176 Acyl-CoA synthetase [L 99.0 3.9E-08 8.5E-13 110.0 24.3 131 305-459 299-452 (537)
83 PRK05850 acyl-CoA synthetase; 99.0 8.7E-08 1.9E-12 108.5 27.7 64 392-460 390-481 (578)
84 PRK12316 peptide synthase; Pro 99.0 1.7E-08 3.6E-13 138.8 25.4 149 277-459 2243-2425(5163)
85 PRK09192 acyl-CoA synthetase; 99.0 4.3E-08 9.2E-13 111.2 24.8 63 393-460 405-483 (579)
86 PLN02387 long-chain-fatty-acid 99.0 5.3E-09 1.2E-13 121.5 17.8 132 307-459 422-580 (696)
87 PRK08279 long-chain-acyl-CoA s 99.0 5.8E-09 1.2E-13 118.8 17.7 142 307-459 316-483 (600)
88 PRK07769 long-chain-fatty-acid 99.0 1.4E-08 2.9E-13 116.6 20.5 64 392-460 411-508 (631)
89 PRK08043 bifunctional acyl-[ac 99.0 1.4E-08 3E-13 118.5 20.3 44 413-460 593-636 (718)
90 PRK08276 long-chain-fatty-acid 99.0 4.4E-08 9.6E-13 108.6 23.5 129 304-459 261-413 (502)
91 PRK13391 acyl-CoA synthetase; 99.0 4.3E-08 9.3E-13 109.2 23.4 128 306-459 276-426 (511)
92 PRK05857 acyl-CoA synthetase; 99.0 7.1E-09 1.5E-13 116.5 17.3 154 277-459 267-446 (540)
93 PRK13388 acyl-CoA synthetase; 99.0 2.6E-08 5.6E-13 112.1 21.6 127 317-459 278-424 (540)
94 PRK12316 peptide synthase; Pro 99.0 2.9E-09 6.3E-14 146.2 15.3 129 307-459 772-930 (5163)
95 PRK08008 caiC putative crotono 99.0 8.9E-08 1.9E-12 106.6 24.5 128 307-459 290-442 (517)
96 PLN03102 acyl-activating enzym 99.0 2.3E-08 4.9E-13 113.6 19.6 59 397-459 390-464 (579)
97 PRK06178 acyl-CoA synthetase; 99.0 1.6E-07 3.5E-12 106.0 26.0 121 316-459 341-486 (567)
98 TIGR02262 benz_CoA_lig benzoat 99.0 8.6E-08 1.9E-12 106.6 23.4 128 307-459 280-428 (508)
99 PRK05851 long-chain-fatty-acid 99.0 2.5E-08 5.4E-13 111.7 19.0 63 393-460 366-440 (525)
100 PRK05691 peptide synthase; Val 98.9 4.9E-08 1.1E-12 133.0 24.8 129 307-459 1390-1549(4334)
101 PRK05620 long-chain-fatty-acid 98.9 1.2E-07 2.7E-12 107.3 23.9 131 307-459 300-474 (576)
102 PRK08308 acyl-CoA synthetase; 98.9 9E-08 2E-12 103.8 21.8 58 396-459 278-335 (414)
103 KOG1175 Acyl-CoA synthetase [L 98.9 2E-07 4.3E-12 104.8 24.8 253 277-581 338-624 (626)
104 PLN02430 long-chain-fatty-acid 98.9 1.3E-08 2.8E-13 117.6 16.0 132 307-459 385-538 (660)
105 KOG1177 Long chain fatty acid 98.9 1.4E-08 3E-13 108.4 14.4 64 392-459 425-505 (596)
106 PRK05691 peptide synthase; Val 98.9 7.9E-08 1.7E-12 131.1 25.3 129 307-459 3985-4146(4334)
107 PF00501 AMP-binding: AMP-bind 98.9 3.2E-08 6.9E-13 106.8 16.6 115 307-444 279-417 (417)
108 TIGR01923 menE O-succinylbenzo 98.9 3.3E-08 7.3E-13 107.2 16.5 59 397-459 290-364 (436)
109 PRK12476 putative fatty-acid-- 98.9 6.1E-07 1.3E-11 102.6 27.4 64 392-460 422-520 (612)
110 PRK06814 acylglycerophosphoeth 98.9 6.1E-08 1.3E-12 118.6 20.2 124 306-459 908-1054(1140)
111 PRK07824 O-succinylbenzoic aci 98.9 4.4E-07 9.6E-12 96.4 24.4 43 412-459 235-277 (358)
112 PRK08180 feruloyl-CoA synthase 98.9 5.2E-08 1.1E-12 111.5 17.6 64 396-459 408-491 (614)
113 PRK07008 long-chain-fatty-acid 98.9 6E-08 1.3E-12 109.0 17.6 58 398-459 383-453 (539)
114 PRK12582 acyl-CoA synthetase; 98.8 2.4E-08 5.2E-13 114.4 14.1 61 394-454 418-496 (624)
115 PRK07445 O-succinylbenzoic aci 98.8 3.8E-08 8.3E-13 108.5 14.8 60 396-459 298-368 (452)
116 PRK07798 acyl-CoA synthetase; 98.8 1.6E-07 3.6E-12 104.3 19.6 131 306-459 297-452 (533)
117 PTZ00216 acyl-CoA synthetase; 98.8 8.3E-08 1.8E-12 111.7 17.2 129 307-459 430-581 (700)
118 COG1022 FAA1 Long-chain acyl-C 98.8 4.4E-08 9.5E-13 110.8 13.0 133 307-480 355-507 (613)
119 PLN02479 acetate-CoA ligase 98.7 2.5E-07 5.5E-12 104.7 17.8 58 398-459 401-474 (567)
120 PRK06018 putative acyl-CoA syn 98.7 3.6E-07 7.8E-12 102.7 18.4 58 398-459 383-454 (542)
121 PRK08162 acyl-CoA synthetase; 98.7 5.7E-07 1.2E-11 100.9 19.2 58 398-459 387-460 (545)
122 PRK13390 acyl-CoA synthetase; 98.7 1.6E-06 3.5E-11 96.2 20.5 127 307-459 272-423 (501)
123 PRK07868 acyl-CoA synthetase; 98.6 2.4E-06 5.2E-11 103.3 19.8 139 306-459 721-880 (994)
124 PRK09029 O-succinylbenzoic aci 98.5 1.9E-06 4.2E-11 94.6 16.3 43 412-459 333-375 (458)
125 KOG1256 Long-chain acyl-CoA sy 98.5 1.5E-07 3.2E-12 105.9 6.8 134 299-459 416-572 (691)
126 TIGR02372 4_coum_CoA_lig 4-cou 98.5 5.3E-06 1.1E-10 89.9 18.2 43 413-459 277-319 (386)
127 KOG1180 Acyl-CoA synthetase [L 98.1 0.00028 6E-09 77.4 21.1 146 307-481 404-574 (678)
128 PF04443 LuxE: Acyl-protein sy 98.0 0.00051 1.1E-08 73.8 20.7 81 33-127 29-116 (365)
129 KOG1179 Very long-chain acyl-C 97.6 0.0015 3.2E-08 72.1 15.0 232 307-568 359-623 (649)
130 COG1020 EntF Non-ribosomal pep 97.1 0.011 2.3E-07 68.0 16.5 63 393-459 561-640 (642)
131 PF14535 AMP-binding_C_2: AMP- 95.8 0.033 7.1E-07 48.2 7.0 84 445-547 1-84 (96)
132 PTZ00297 pantothenate kinase; 95.2 0.35 7.6E-06 60.8 15.8 54 399-459 825-881 (1452)
133 PRK09188 serine/threonine prot 87.0 0.82 1.8E-05 49.4 4.8 39 412-459 210-251 (365)
134 KOG1178 Non-ribosomal peptide 57.2 7.6 0.00017 47.2 2.8 44 413-460 456-499 (1032)
135 cd04931 ACT_PAH ACT domain of 43.1 1.5E+02 0.0032 25.3 7.8 58 450-518 25-82 (90)
136 KOG1179 Very long-chain acyl-C 34.9 20 0.00043 40.6 1.5 30 395-424 484-519 (649)
137 PF01797 Y1_Tnp: Transposase I 34.7 2E+02 0.0044 25.0 7.8 103 432-552 7-118 (121)
138 PF09926 DUF2158: Uncharacteri 34.3 38 0.00082 26.1 2.5 19 413-434 1-19 (53)
139 COG5475 Uncharacterized small 32.6 50 0.0011 25.7 2.8 24 413-439 5-28 (60)
140 PF11454 DUF3016: Protein of u 32.5 1.1E+02 0.0023 28.6 5.6 55 394-450 47-111 (141)
141 PF07311 Dodecin: Dodecin; In 31.5 1.4E+02 0.0029 24.2 5.3 48 447-495 14-62 (66)
142 COG2139 RPL21A Ribosomal prote 30.8 40 0.00087 29.2 2.3 37 410-446 30-69 (98)
143 PTZ00189 60S ribosomal protein 30.3 37 0.00079 32.2 2.2 35 412-446 33-70 (160)
144 PRK11899 prephenate dehydratas 26.8 4.4E+02 0.0096 27.4 9.7 41 450-495 205-245 (279)
145 PRK13390 acyl-CoA synthetase; 26.5 30 0.00066 38.2 1.2 19 102-121 151-169 (501)
146 PLN00190 60S ribosomal protein 25.3 50 0.0011 31.3 2.2 37 410-446 31-70 (158)
147 COG0077 PheA Prephenate dehydr 24.0 4.9E+02 0.011 27.1 9.3 70 421-495 167-245 (279)
148 cd04880 ACT_AAAH-PDT-like ACT 23.6 3.7E+02 0.0081 21.2 8.0 29 465-494 21-49 (75)
149 PRK04306 50S ribosomal protein 23.4 63 0.0014 28.2 2.2 37 410-446 32-71 (98)
150 cd03483 MutL_Trans_MLH1 MutL_T 23.3 1.7E+02 0.0037 26.4 5.3 44 417-462 30-73 (127)
151 PRK11898 prephenate dehydratas 21.4 5.7E+02 0.012 26.5 9.4 41 450-495 208-248 (283)
152 COG2026 RelE Cytotoxic transla 21.1 1.1E+02 0.0024 26.0 3.4 29 402-430 45-73 (90)
153 cd04866 LigD_Pol_like_3 LigD_P 21.0 67 0.0015 32.3 2.2 50 95-145 121-172 (223)
No 1
>PLN02620 indole-3-acetic acid-amido synthetase
Probab=100.00 E-value=2.5e-136 Score=1125.91 Aligned_cols=584 Identities=67% Similarity=1.151 Sum_probs=549.1
Q ss_pred CCcccchHHHHHHHHHHhHcHHHHHHHHHHHHHHhcCCChHHHhcCCCCCCCHHHHhhcCCCCCccchhHHHHHHHcCCC
Q 007532 13 PPACEKDAKALRFIEEMTRNAEAVQEKVLAEILSRNADVEYLKRYKLGGATDRETFKSKLPIIKYEDLQPEIQRIANGDR 92 (599)
Q Consensus 13 ~~~~~~~~~~~~~~e~~~~~~~~~Q~~~L~~iL~~~~~T~ygr~~gf~~i~s~edF~~~vPl~~Yed~~p~ier~~~Ge~ 92 (599)
+...+++++.++.||..++|++++|+++|++||++|++|+|||+|||++|+++++||++|||++|||++|||+||++||.
T Consensus 15 ~~~~~~~~~~l~~ie~~t~~~~~vQ~~vL~~IL~~n~~Teyg~~~~f~~i~~~~~F~~~VPv~~Yedl~pyI~Ri~~Ge~ 94 (612)
T PLN02620 15 YNLAEKNKKALQFIEDVTSNADEVQKRVLEEILSRNAHVEYLQRHGLNGRTDRETFKKVMPVITYEDIQPDINRIANGDT 94 (612)
T ss_pred CccccchHHHHHHHHHHHhCHHHHHHHHHHHHHHhcccChhHHhcCCCCCCCHHHHHHhCCCccHHHhHHHHHHHHcCCC
Confidence 34556668888999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred cccccccccceeecccccCCCCccccccChHHHHHHHHHHHHHHHHHhhcCCCCCCCceEEEEecccCccCCCCceeecc
Q 007532 93 SAILSAHPISEFLTSSGTSAGERKLMPTIQEELDRRQLLYSLLMPVMNLYVPGLDKGKALYFLFVKSETRTPGGLLARPV 172 (599)
Q Consensus 93 ~~ll~~~pi~~f~~TSGTT~G~~K~IP~T~~~l~~~~~~~~~~~~~~~~~~p~~~~gk~l~~~~~~~~~~t~~Gip~g~~ 172 (599)
++|||++||.+|+.|||||||++|+||+|+++++.+..++.+|+.++++.+|++..||.||+.+...+..|++|||+|++
T Consensus 95 s~vL~~~pi~~F~~SSGTT~g~~K~IP~t~e~l~~~~~~~~~~~~~~~~~~p~l~~Gk~~~~~~~~~~~~T~~Gip~g~~ 174 (612)
T PLN02620 95 SPILCSKPISEFLTSSGTSGGERKLMPTIEEELGRRSLLYSLLMPVMSQFVPGLEKGKGMYFLFIKSEAKTPGGLVARPV 174 (612)
T ss_pred CCccCCCChhhhhhcCCCCCCceeeeecCHHHHHHHHHHHHHHHHHHHhhCCCcccCcEEEEEecccCccCCCCcccccc
Confidence 89999999999999999998899999999999999888899999999998899999999999988889999999999999
Q ss_pred cccccccccccCCCCCCCCccCCchhhhhccChhhhHHHHHHhhhccccceeEEeeccHHHHHHHHHHHHHHHHHHHHHH
Q 007532 173 LTSYYKSEHFKTRPYDPYNVYTSPNEAILCADSFQSMYVQMLCGLLEREQVLRLGAVFASGLLRAIRFLQLHWQALASDI 252 (599)
Q Consensus 173 s~~~~~~~~~~~~~~~~~~~~~~P~~v~~~~d~~~~~Y~~ll~~L~~~~~v~~i~~~~~~~ll~~~~~le~~w~~l~~dI 252 (599)
|++++.|.+|++++..+...|++|.+++++.|..|+|||||||||.++++|..|+++|+++|++++++||++|++||+||
T Consensus 175 st~~y~s~~f~~~~~~~~~~~~sP~ev~~~~D~~qs~Y~~LLcgL~~~~~v~~v~svfa~~ll~a~~~Le~~w~~L~~DI 254 (612)
T PLN02620 175 LTSYYKSSHFKDRPYDPYTNYTSPNETILCPDSYQSMYSQMLCGLCQHKEVLRVGAVFASGFIRAIRFLEKHWTLLCRDI 254 (612)
T ss_pred cchhhhhhhhhhcccccccceeCcHHhccCCCHHHHHHHHHHHHhhcchhhceEEeechHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999998888889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhccCCCCCCCchhhhhhcccCCCCHHHHHHHHHHhccccccccccccCCCCceeEEEEecchhhhHHHHHHHhCCCCCc
Q 007532 253 ESGTLNQKITDPSIKDCLGKTLKPNTELAEFIRMECSKENWERIITRIWPNTKYLDVIVTGAMAQYIPTLDYYSGGKLPM 332 (599)
Q Consensus 253 ~~gt~~~~i~~~~~r~~l~~~l~~~p~~A~~L~~~~~~~~~~g~~~~lWP~l~~l~~~~~g~~~~y~~~l~~~~g~~~~~ 332 (599)
++|+++++++++++|.++++.|+|||++|+.|+++|.+.+|.|++++|||||++|.||++|+|++|++.|+.|+|+ +|+
T Consensus 255 ~~G~ls~~itd~~~R~av~~~L~p~pelA~~i~~~c~~~~w~gii~rLWP~lk~I~~~~tGsm~~Y~p~L~~y~gg-lpl 333 (612)
T PLN02620 255 RTGTIDSQITDPSVREAVMKILKPDPKLADFVEAECRKESWQGIITRLWPNTKYVDVIVTGTMSQYIPTLDYYSNG-LPL 333 (612)
T ss_pred hcCCCCccCCCHHHHHHHHhhcCCCHHHHHHHHHHhccccccCcHHHhCCCCcEEEEECCCCHHHHHHHHHHHcCC-Ccc
Confidence 9999999999999999999999999999999999999989999999999999999999999999999999999988 999
Q ss_pred cccccccccccccccCCCCCCCCCCceeeecCceEEEEeeCCCCCCC---------CCCCCCCCCcccccCCCCCeEEEE
Q 007532 333 ACTMYASSECYFGLNLNPICRPSEVSYTIMPNMAYFEFLPQEPSDSF---------GLTSSDPQPVDLVDVEMGKEYELV 403 (599)
Q Consensus 333 ~~~~Y~asEg~i~i~~~~~~~~~~~~~~l~~~~~ffEFip~~~~~~~---------~~~~~~~~~l~~~ev~~G~~Yelv 403 (599)
++.+|+||||+||+|++|.|+++..+|+|+|+.+||||||.++.+.. .++..++++|+++||++|++||||
T Consensus 334 ~~~~Y~ASE~~~ginl~P~~~p~~~sy~L~p~~~yFEFip~~~~~~~~~~~~~~~~~~~~~~~~~v~l~ev~~G~~Yelv 413 (612)
T PLN02620 334 VCTMYASSECYFGVNLNPLCKPSEVSYTLIPTMAYFEFLPVHRNNGVTNSISLPKSLNEKEQQELVDLVDVKLGQEYELV 413 (612)
T ss_pred ccccccccceEEEeccCCCCCcccceeeecCCcEEEEEeeccCcccccccccccccccccccCccccHHHccCCCeEEEE
Confidence 99999999999999999999999999999999999999998753210 001223458999999999999999
Q ss_pred EeeccceeccccCCEEEEeeccCCCCEEEEEeecCceeeccccccCHHHHHHHHHHHHHHhhhcCCeEEeeEEeecCCCC
Q 007532 404 ITTYAGLYRYRVGDILRVIGFHNSAPQFHFVRRKNVLLSIESDKTDEAELQNAIDNASRLLREFNTSVGEYTSYANTKTI 483 (599)
Q Consensus 404 iTt~~GLyRYr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~GEk~~e~~v~~av~~a~~~l~~~g~~l~~f~~~~~~~~~ 483 (599)
|||.+||||||+||||+|+||||++|+|+|++|.+.++|++|||++|+++..||.+|.+.|.+.+++|+|||+++|.++.
T Consensus 414 vTt~~GLyRYrlGDvv~V~Gf~n~~P~~~Fv~R~~~~lsi~gEK~tE~~l~~Av~~a~~~l~~~~~~l~dyts~~d~~~~ 493 (612)
T PLN02620 414 VTTYAGLYRYRVGDVLRVAGFKNKAPQFSFICRKNVVLSIDSDKTDEVELQNAVKNAVNHLVPFDASLTEYTSYADTSTI 493 (612)
T ss_pred EEecCceEEEecCCEEEEeeecCCCceEEEEeecCceeecccccCCHHHHHHHHHHHHHhhcccCceeeeEEeccccCCC
Confidence 99999999999999999999999999999999999999999999999999999999998876678999999999998889
Q ss_pred CceEEEEEEEeecCCCCCCChHHHHHHHHHHHHHhChhhHhccccCCccCCeEEEEeCCccHHHHHHHHHhcCCCCCCCC
Q 007532 484 PGHYVIYWELLIKDSANSPTNEVLNQCCLAMEECLNSVYRQGRVADNSIGPLEIRVVRNGTFEELMDYAISRGASINQYK 563 (599)
Q Consensus 484 p~hY~l~~E~e~~~~~~~~~~~~l~~~~~~ld~~LN~~Y~~~R~~~g~l~p~~v~iv~~gtF~~~~~~~~~~G~~~~Q~K 563 (599)
||||+||||+...+. ..++++++++||..||++||++|+.+|..+++|+|++|++|++|||++++++++++|++.+|||
T Consensus 494 PghYvl~~El~~~~~-~~~~~~~l~~cc~~lE~~Ln~~Yr~~R~~~~sIgPLeirvv~~GtF~~l~~~~~~~G~s~~QyK 572 (612)
T PLN02620 494 PGHYVLFWELCLNGS-TPIPPSVFEDCCLTIEESLNSVYRQGRVSDKSIGPLEIKIVEPGTFDKLMDYAISLGASINQYK 572 (612)
T ss_pred CCceEEEEEEecCCC-CCCCHHHHHHHHHHHHHHhCHHHHHHHhcCCcCCCcEEEEeCCChHHHHHHHHHHcCCcccccc
Confidence 999999999953221 2356789999999999999999999996655699999999999999999999999999999999
Q ss_pred CCcccCCHhHHHHHhccccceeccCCCCCCCCCCC
Q 007532 564 VPRCVNFTPIVELLDSRTVSAHFSPALPHWTPERR 598 (599)
Q Consensus 564 ~Pr~~~~~~~~~~L~~~~~~~~~s~~~~~~~~~~~ 598 (599)
+|||+++++++++|+++|+++|||+++|+|+|+++
T Consensus 573 ~Pr~v~~~~~~~~l~~~v~~~~~s~~~~~~~~~~~ 607 (612)
T PLN02620 573 TPRCVKFAPIIELLNSRVVSNYFSPKCPKWVPGHK 607 (612)
T ss_pred CceEecCHHHHHHHHhhhheeeccccCCCCCcccc
Confidence 99999999999999999999999999999999865
No 2
>PLN02247 indole-3-acetic acid-amido synthetase
Probab=100.00 E-value=3.4e-132 Score=1095.87 Aligned_cols=579 Identities=56% Similarity=1.022 Sum_probs=539.7
Q ss_pred cchHHHHHHHHHHhHcHHHHHHHHHHHHHHhcCCChHHHhcCCCCCCCHHHHhhcCCCCCccchhHHHHHHHcCCCcccc
Q 007532 17 EKDAKALRFIEEMTRNAEAVQEKVLAEILSRNADVEYLKRYKLGGATDRETFKSKLPIIKYEDLQPEIQRIANGDRSAIL 96 (599)
Q Consensus 17 ~~~~~~~~~~e~~~~~~~~~Q~~~L~~iL~~~~~T~ygr~~gf~~i~s~edF~~~vPl~~Yed~~p~ier~~~Ge~~~ll 96 (599)
.++++.++.+|.+++|++++|+++|++||++|++|+|||+|+| +|.++++||++|||++|||++|||+||++||.++++
T Consensus 8 ~~~~~~~~~~e~~t~~~~~~Q~~vL~~iL~~n~~Teyg~~~~~-~i~~~e~Fk~~VPv~~Yedl~pyI~Ri~~Ge~~~ll 86 (606)
T PLN02247 8 NDNEAGLKLLEDLTTNACQIQQQVLEEILTQNAGTEYLRSFLD-GESDKQSFKNKVPVVNYEDIKPCIERIANGESSSII 86 (606)
T ss_pred cchHHHHHHHHHHHhCHHHHHHHHHHHHHHhcccChhhhhcCc-cCCCHHHHHHhCCCccHHHhHHHHHHHHcCCCCcee
Confidence 3558889999999999999999999999999999999999855 899999999999999999999999999999986677
Q ss_pred cccccceeecccccCCCCccccccChHHHHHHHHHHHHHHHHHhhcCCCCCCCceEEEEecccCccCCCCceeecccccc
Q 007532 97 SAHPISEFLTSSGTSAGERKLMPTIQEELDRRQLLYSLLMPVMNLYVPGLDKGKALYFLFVKSETRTPGGLLARPVLTSY 176 (599)
Q Consensus 97 ~~~pi~~f~~TSGTT~G~~K~IP~T~~~l~~~~~~~~~~~~~~~~~~p~~~~gk~l~~~~~~~~~~t~~Gip~g~~s~~~ 176 (599)
+++||.+|+.|||||||++|+||+|+++++.+.+++.+|...+++..|++..||.||+.+..++..|++|||+|++++.+
T Consensus 87 t~~pi~~F~~SSGTT~g~~K~IP~t~e~l~~~~~~~~l~~~~~~~~~p~l~~Gk~~~~~~~~~~~~T~~Gip~g~~~t~y 166 (606)
T PLN02247 87 SAQPITELLTSSGTSGGQPKLMPSTAEELDRKTFFYNLLVPVMNKYVDGLDQGKGMYLLFIKPEISTPSGLMARPVLTSY 166 (606)
T ss_pred CCCCcceeeccCCCCCCceeEeeccHHHHHHHHHHHHHHHHHHHhcCCCcccCcEEEEEecCcCccCCCCcccccccchh
Confidence 89999999999999988999999999999998899999999999878999999999999888999999999999999999
Q ss_pred cccccccCCCCCCCCccCCchhhhhccChhhhHHHHHHhhhccccceeEEeeccHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 007532 177 YKSEHFKTRPYDPYNVYTSPNEAILCADSFQSMYVQMLCGLLEREQVLRLGAVFASGLLRAIRFLQLHWQALASDIESGT 256 (599)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~P~~v~~~~d~~~~~Y~~ll~~L~~~~~v~~i~~~~~~~ll~~~~~le~~w~~l~~dI~~gt 256 (599)
+++.+|+.++..+...|++|.+++.+.|..|+|||||||||.+++++..|+++|+++|++++++||++|++||+||++|+
T Consensus 167 ~~s~~f~~~~~~~~~~~~sP~ev~~~~D~~qs~Y~~LLcgL~~~~~vl~v~svfa~s~l~a~~~Le~~we~L~~DI~~G~ 246 (606)
T PLN02247 167 YKSSNFRNRPFNRYNVYTSPDETILCQDSKQSMYCQLLCGLVQRDEVLRVGAVFASAFLRAIKFLEDHWKELCSNIRTGC 246 (606)
T ss_pred hccccccccccccccceeCcHHhhcCCCHHHHHHHHHHHHhhccccccEEEEeccHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 99999999887776789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCchhhhhhcccC-CCCHHHHHHHHHHhccccccccccccCCCCceeEEEEecchhhhHHHHHHHhCCCCCcccc
Q 007532 257 LNQKITDPSIKDCLGKTL-KPNTELAEFIRMECSKENWERIITRIWPNTKYLDVIVTGAMAQYIPTLDYYSGGKLPMACT 335 (599)
Q Consensus 257 ~~~~i~~~~~r~~l~~~l-~~~p~~A~~L~~~~~~~~~~g~~~~lWP~l~~l~~~~~g~~~~y~~~l~~~~g~~~~~~~~ 335 (599)
++++++++++|.++.+.+ +|+|++|++|+++|.+.+|.|++++|||||++|.||++|+|++|++.|+.|+|+ +|+++.
T Consensus 247 ls~~it~p~~R~a~~~~l~~p~peLA~~l~~~c~~~~w~gi~~rLWP~lk~I~~~~tGsm~~Y~~~L~~y~gg-lpl~s~ 325 (606)
T PLN02247 247 VSDWITDPSCRNAVSSILSKPNSELADLIESECSGKSWEGIIKRLWPRTKYIEVIVTGSMAQYIPTLEFYSGG-LPLVST 325 (606)
T ss_pred cccccCCHHHHHHHhhcccCCCHHHHHHHHHHhcccCccccHHHhCCCCcEEEEECCCCHHHHHHHHHHHcCC-Cceecc
Confidence 999999999999999999 599999999999999889999999999999999999999999999999999988 999999
Q ss_pred ccccccccccccCCCCCCCCCCceeeecCceEEEEeeCCCCCCC--C----C---C-----CCCCCCcccccCCCCCeEE
Q 007532 336 MYASSECYFGLNLNPICRPSEVSYTIMPNMAYFEFLPQEPSDSF--G----L---T-----SSDPQPVDLVDVEMGKEYE 401 (599)
Q Consensus 336 ~Y~asEg~i~i~~~~~~~~~~~~~~l~~~~~ffEFip~~~~~~~--~----~---~-----~~~~~~l~~~ev~~G~~Ye 401 (599)
+|+||||+||+|++|.|+++...|+|+|+.+||||||.++.+.+ + + . +.++.+|+++||++|+.||
T Consensus 326 ~Y~sSE~~~ginl~p~~~p~~~sy~L~p~~~yFEFip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~evk~G~~Ye 405 (606)
T PLN02247 326 MYASSECYFGINLKPLSDPSDVSYTLLPNMAYFEFLPVDKNNGEVIHFVQCNGTDDDDDALKEDLEIVDLVDVKVGHYYE 405 (606)
T ss_pred cccccceEEEeccCcCCCccCCceeecCCcEEEEEeecCCCcccccccccccccccccccccccCceecHHHccCCCeEE
Confidence 99999999999999999998999999999999999998754310 0 0 0 1133499999999999999
Q ss_pred EEEeeccceeccccCCEEEEeeccCCCCEEEEEeecCceeeccccccCHHHHHHHHHHHHHHhhhcCCeEEeeEEeecCC
Q 007532 402 LVITTYAGLYRYRVGDILRVIGFHNSAPQFHFVRRKNVLLSIESDKTDEAELQNAIDNASRLLREFNTSVGEYTSYANTK 481 (599)
Q Consensus 402 lviTt~~GLyRYr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~GEk~~e~~v~~av~~a~~~l~~~g~~l~~f~~~~~~~ 481 (599)
|||||.+||||||+||||+|+||||++|+|+|+||.+.++|++|||++|+++..||.+|.+.+++.++.|.||++++|.+
T Consensus 406 lVvTt~~GLYRYrlGDvv~V~GF~n~~P~~~Fv~R~~~vlsi~gEK~tE~~l~~Av~~a~~~l~~~~~~l~d~ts~~d~~ 485 (606)
T PLN02247 406 LVVTTFTGLYRYRVGDILMVTGFYNNAPQFRFVQRRNVVLSIDTDKTNEEDLLKAVTQAKLLLEPLGFLLTEYTSYADTS 485 (606)
T ss_pred EEEEecCceEEEecCCEEEEeeecCCCceEEEEecCCceeecccccCCHHHHHHHHHHHHHhhcccCeeeeeeecccccC
Confidence 99999999999999999999999999999999999999999999999999999999999987766689999999999988
Q ss_pred CCCceEEEEEEEeecCCC--CCCChHHHHHHHHHHHHHhChhhHhccccCCccCCeEEEEeCCccHHHHHHHHHhcCCCC
Q 007532 482 TIPGHYVIYWELLIKDSA--NSPTNEVLNQCCLAMEECLNSVYRQGRVADNSIGPLEIRVVRNGTFEELMDYAISRGASI 559 (599)
Q Consensus 482 ~~p~hY~l~~E~e~~~~~--~~~~~~~l~~~~~~ld~~LN~~Y~~~R~~~g~l~p~~v~iv~~gtF~~~~~~~~~~G~~~ 559 (599)
+.||||+||||++..+.. ...+...+++||..||++||++|+.+|..+|+|+|++|++|++|||++++++++++|++.
T Consensus 486 ~~PghYvlf~El~~~~~~~~~~~~~~~l~~cc~~lE~~Ln~~Yr~~R~~~~~igPLeirvv~~GtF~~l~~~~~~~G~s~ 565 (606)
T PLN02247 486 SIPGHYVLFWELKTRGSNDPPELDPKIMEQCCSTVEESLDSVYRRCRKRDKSIGPLEIRVVKHGTFDALMDFCVSQGSSV 565 (606)
T ss_pred CCCCceEEEEEeecCCCCccccchHHHHHHHHHHHHHHhhHHHHHHhhccCcCCCcEEEEeCCChHHHHHHHHHHcCCCc
Confidence 899999999999632210 123567899999999999999999999665699999999999999999999999999999
Q ss_pred CCCCCCcccCCHhHHHHHhccccceeccCCCCCCCCCC
Q 007532 560 NQYKVPRCVNFTPIVELLDSRTVSAHFSPALPHWTPER 597 (599)
Q Consensus 560 ~Q~K~Pr~~~~~~~~~~L~~~~~~~~~s~~~~~~~~~~ 597 (599)
+|||+|||+++++++++|+++|+++|||+++|+|+|+.
T Consensus 566 ~Q~K~Pr~v~~~~~~~~l~~~v~~~~~s~~~~~~~~~~ 603 (606)
T PLN02247 566 NQYKTPRCIKSEEALKILDSRVIGRFFSKRVPFWEPFG 603 (606)
T ss_pred ccccCceEecCHHHHHHHHhhhheeeccccCCCCCccc
Confidence 99999999999999999999999999999999999974
No 3
>PLN02249 indole-3-acetic acid-amido synthetase
Probab=100.00 E-value=5.2e-126 Score=1056.12 Aligned_cols=591 Identities=75% Similarity=1.182 Sum_probs=536.8
Q ss_pred CccccccCCCCC-CCcccchHHHHHHHHHHhHcHHHHHHHHHHHHHHhcCCChHHHhcCCCCCCCHHHHhhcCCCCCccc
Q 007532 1 MAVDSALSSPLG-PPACEKDAKALRFIEEMTRNAEAVQEKVLAEILSRNADVEYLKRYKLGGATDRETFKSKLPIIKYED 79 (599)
Q Consensus 1 ~~~~~~~~~~~~-~~~~~~~~~~~~~~e~~~~~~~~~Q~~~L~~iL~~~~~T~ygr~~gf~~i~s~edF~~~vPl~~Yed 79 (599)
|+++|..-+-.. |....+++..++.+|..++||+++|+++|++||+.|++|+|||+|||++|+++++||++|||++|||
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~l~~~e~~t~~~~~~Q~~vL~~iL~~n~~Teyg~~~gf~~i~~~~~F~~~VPv~~Yed 80 (597)
T PLN02249 1 MAVDSPLQSRMASPTTSEKDVKALKFIEEMTRNPDSVQEKVLGEILSRNSNTEYLKRFDLNGAVDRKTFKSKVPVVTYED 80 (597)
T ss_pred CCcCchhhhhccCCCCCCcHHHHHHHHHHHHhCHHHHHHHHHHHHHHhcccChhHHhcCCCCCCCHHHHHHhCCCccHHH
Confidence 667776554433 3444555778899999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHcCCCcccccccccceeecccccCCCCccccccChHHHHH--HHHHHHHHHHHHhhcCCCCCCCceEEEEec
Q 007532 80 LQPEIQRIANGDRSAILSAHPISEFLTSSGTSAGERKLMPTIQEELDR--RQLLYSLLMPVMNLYVPGLDKGKALYFLFV 157 (599)
Q Consensus 80 ~~p~ier~~~Ge~~~ll~~~pi~~f~~TSGTT~G~~K~IP~T~~~l~~--~~~~~~~~~~~~~~~~p~~~~gk~l~~~~~ 157 (599)
++|||+|+++||.++|||++||.+|+.|||||||++|+||+|+++++. +..+..+| ..+...|+++.||.|++.+.
T Consensus 81 l~pyIeRi~~Ge~~~vL~~~pi~~f~~SSGTT~g~~K~IP~T~~~l~~~~~~~~~~~~--~~~~~~~~l~~Gk~l~~~~~ 158 (597)
T PLN02249 81 LKTEIQRISNGDRSPILSSHPITEFLTSSGTSAGERKLMPTIEEDIDRRQLLGSLLMP--VMNLYVPGLDKGKGLYFLFV 158 (597)
T ss_pred hHHHHHHHHcCCCCceeCCCchhhhcccCCCCCCceeEEeccHHHHHHHHHHHHHHHH--HHhccCCccccCcEEEEEec
Confidence 999999999998877999999999999999999999999999999984 45555555 33434678889999999888
Q ss_pred ccCccCCCCceeecccccccccccccCCCCCCCCccCCchhhhhccChhhhHHHHHHhhhccccceeEEeeccHHHHHHH
Q 007532 158 KSETRTPGGLLARPVLTSYYKSEHFKTRPYDPYNVYTSPNEAILCADSFQSMYVQMLCGLLEREQVLRLGAVFASGLLRA 237 (599)
Q Consensus 158 ~~~~~t~~Gip~g~~s~~~~~~~~~~~~~~~~~~~~~~P~~v~~~~d~~~~~Y~~ll~~L~~~~~v~~i~~~~~~~ll~~ 237 (599)
..+..|.+|+|+|++++.++++..|+.++ ....|++|.+++.+.|..++|||||||||++++++..|++.+|+.++++
T Consensus 159 ~~~~~t~gG~p~~~~~~~~~~~~~f~~~~--~~~~~~~P~ev~~~~D~~~~~Y~~lL~gL~~~~~~~~i~~~~Ps~l~~~ 236 (597)
T PLN02249 159 KSESKTSGGLPARPALTSYYKSDHFRTSD--YDNVYTSPNEAILCSDSSQSMYAQMLCGLLMRHEVLRLGAVFPSGLLRA 236 (597)
T ss_pred cccccCCCCCccCcccccccccccccccc--ccccccCcHHhhcCCCHHHHHHHHHHHHHhhccccceEEEECcHHHHHH
Confidence 88999999999999999887887877775 3678999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhccCCCCCCCchhhhhhcccC-CCCHHHHHHHHHHhccccccccccccCCCCceeEEEEecchh
Q 007532 238 IRFLQLHWQALASDIESGTLNQKITDPSIKDCLGKTL-KPNTELAEFIRMECSKENWERIITRIWPNTKYLDVIVTGAMA 316 (599)
Q Consensus 238 ~~~le~~w~~l~~dI~~gt~~~~i~~~~~r~~l~~~l-~~~p~~A~~L~~~~~~~~~~g~~~~lWP~l~~l~~~~~g~~~ 316 (599)
+++|+++|++||+||++|+++.+++++.+|..+...+ .|+|++|++|+++|.+.+|+|++++|||||++|+||++||++
T Consensus 237 ~~~l~~~weel~~dI~~g~~~~~~~~~~~~~~v~~i~g~P~~~la~~i~~~~~~~~~~gii~~lWPnl~~i~~~~~G~~~ 316 (597)
T PLN02249 237 ISFLQNNWKELAQDISTGTLSSKIFDPAIKNRMSKILNKPDQELAEFLIGVCSQENWEGIITKIWPNTKYLDVIVTGAMA 316 (597)
T ss_pred HHHHHHHHHHHHHHHHhCCCcccccchHHHHHHHhhcCCCCHHHHHHHHHHhccccccccHHHhCCCCCeEEEEecCChH
Confidence 9999999999999999999999999999999998888 589999999999998877999999999999999999999999
Q ss_pred hhHHHHHHHhCCCCCccccccccccccccccCCCCCCCCCCceeeecCceEEEEeeCCCCCCCCCCCCCCCCcccccCCC
Q 007532 317 QYIPTLDYYSGGKLPMACTMYASSECYFGLNLNPICRPSEVSYTIMPNMAYFEFLPQEPSDSFGLTSSDPQPVDLVDVEM 396 (599)
Q Consensus 317 ~y~~~l~~~~g~~~~~~~~~Y~asEg~i~i~~~~~~~~~~~~~~l~~~~~ffEFip~~~~~~~~~~~~~~~~l~~~ev~~ 396 (599)
+|++.|+.++|+ +++++.+|+||||+||+|+++.|++++.+|+|+|+.+||||||.++.+. +..+.+.+|+++|||+
T Consensus 317 ~Y~~~l~~~~g~-~~~~~~~Y~ASEg~~gi~~~~~~~p~~~~~~l~~~~~ffEFiP~~~~~~--~~~~~~~~v~l~eVe~ 393 (597)
T PLN02249 317 QYIPMLEYYSGG-LPMASTIYASSESYFGINLNPMCKPSEVSYTIMPNMAYFEFLPHNHDGD--GALDETSLVELADVEV 393 (597)
T ss_pred HHHHHHHHHcCC-CccccccccccceEEEeecCCCCCCCCcceEecCCcEEEEeeecccCCc--ccCCCCcEecHHHcCC
Confidence 999999999988 8999999999999999999999998889999999999999999875321 0012345999999999
Q ss_pred CCeEEEEEeeccceeccccCCEEEEeeccCCCCEEEEEeecCceeeccccccCHHHHHHHHHHHHHHhhhcCCeEEeeEE
Q 007532 397 GKEYELVITTYAGLYRYRVGDILRVIGFHNSAPQFHFVRRKNVLLSIESDKTDEAELQNAIDNASRLLREFNTSVGEYTS 476 (599)
Q Consensus 397 G~~YelviTt~~GLyRYr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~GEk~~e~~v~~av~~a~~~l~~~g~~l~~f~~ 476 (599)
|++|||||||++|||||++||+|+|+||++++|+|+|+||.++++|++|||++|++++.||.+|.+.+++.|+.|.|||+
T Consensus 394 G~~Y~lVvTT~~GLyRY~iGDvVrvtgf~~~~P~i~F~gR~~~~ls~~GEKl~e~~v~~Av~~a~~~~~~~~~~v~eft~ 473 (597)
T PLN02249 394 GKEYELVITTYAGLYRYRVGDILRVTGFHNSAPQFKFIRRKNVLLSIESDKTDEADLQKAVENASRLLAEQGTRVIEYTS 473 (597)
T ss_pred CCeEEEEEEcccceeEeecCCEEEEeeccCCCcEEEEEccCCcceecccccCCHHHHHHHHHHHHHHhhhcCceEEEeEE
Confidence 99999999999999999999999999999999999999999999999999999999999999988777778999999999
Q ss_pred eecCCCCCceEEEEEEEeecCCCC-CCChHHHHHHHHHHHHHhChhhHhccccCCccCCeEEEEeCCccHHHHHHHHHhc
Q 007532 477 YANTKTIPGHYVIYWELLIKDSAN-SPTNEVLNQCCLAMEECLNSVYRQGRVADNSIGPLEIRVVRNGTFEELMDYAISR 555 (599)
Q Consensus 477 ~~~~~~~p~hY~l~~E~e~~~~~~-~~~~~~l~~~~~~ld~~LN~~Y~~~R~~~g~l~p~~v~iv~~gtF~~~~~~~~~~ 555 (599)
.++.++.|+||+||||++..++.. +.+.+.+.+||..++++||.+|+.+|..+|+|+||+|++|++|+|.+|+++++++
T Consensus 474 ~~~~~~~p~Hyvl~wei~~~~~~~~~~~~~~~~~~~~~~e~~ln~~Y~~~R~~~~~L~pl~v~vv~~GtF~~~~~~~~~~ 553 (597)
T PLN02249 474 YAETKTIPGHYVIYWELLGRDQSNALPSDEVMAKCCLEMEESLNSVYRQSRVSDKSIGPLEIRVVQNGTFEELMDYAISR 553 (597)
T ss_pred ecCCCCCCCceEEEEEEeccccccCCCCHHHHHHHHHHHHHHhCHHHHHHHhcCCccCCeEEEEeCCchHHHHHHHHHhC
Confidence 888877799999999994212101 2567789999999999999999999976669999999999999999999999999
Q ss_pred CCCCCCCCCCcccCCHhHHHHHhccccceeccCCCCCCCCCCC
Q 007532 556 GASINQYKVPRCVNFTPIVELLDSRTVSAHFSPALPHWTPERR 598 (599)
Q Consensus 556 G~~~~Q~K~Pr~~~~~~~~~~L~~~~~~~~~s~~~~~~~~~~~ 598 (599)
|+++||||+|||+++++++++|+++|+++|+|+++|.|+|+.+
T Consensus 554 G~~~gQ~K~Prl~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 596 (597)
T PLN02249 554 GSSINQYKVPRCVSLTPIMELLDSRVVSAHFSPSLPHWSPERR 596 (597)
T ss_pred CCcCCCcCCceEeCCHHHHHHHHhhhheeeccccCCCCCCCCC
Confidence 9999999999999999999999999999999999999999854
No 4
>PF03321 GH3: GH3 auxin-responsive promoter; InterPro: IPR004993 Transcription of the gene family, GH3, has been shown to be specifically induced by the plant hormone auxin. The auxin-responsive GH3 gene promoter is composed of multiple auxin response elements (AuxREs), and each AuxRE contributes incrementally to the strong auxin inducibility to the promoter.; PDB: 4EPL_A 4EQ4_B 4EWV_B 4EQL_B 4EPM_A.
Probab=100.00 E-value=1.3e-113 Score=955.40 Aligned_cols=515 Identities=38% Similarity=0.665 Sum_probs=408.0
Q ss_pred HHHHHHHHhHcHHHHHHHHHHHHHHhcCCChHHHhcCCCCCCCHHH--HhhcCCCCCccchhHHHHHHHcCCCccccccc
Q 007532 22 ALRFIEEMTRNAEAVQEKVLAEILSRNADVEYLKRYKLGGATDRET--FKSKLPIIKYEDLQPEIQRIANGDRSAILSAH 99 (599)
Q Consensus 22 ~~~~~e~~~~~~~~~Q~~~L~~iL~~~~~T~ygr~~gf~~i~s~ed--F~~~vPl~~Yed~~p~ier~~~Ge~~~ll~~~ 99 (599)
.+++|+++++|++++|+++|++||+.|++|+|||+|||++|+|++| ||++|||++||||+||||||++||. +|||++
T Consensus 2 ~l~~f~~~~~~~~~~Q~~~L~~iL~~n~~T~yGr~~gf~~i~s~ed~~Fr~~VPi~~Yed~~pyIeR~~~Ge~-~vL~~~ 80 (528)
T PF03321_consen 2 VLKRFEKATKNPEQVQEEVLREILRRNADTEYGRDHGFAGIRSVEDESFRKRVPITDYEDYRPYIERIAEGEE-NVLTPG 80 (528)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHCTTSHHHHCTT--S----HHHHHHHHS--BEHHHHHHHHHHHHTT---CCTSSS
T ss_pred hHHHHHHHHhCHHHHHHHHHHHHHHhhccCHhHHhcCCCCCCCcchHHHHHhCCCccHHHHHHHHHHHhcCCC-CCCCCC
Confidence 4789999999999999999999999999999999999999999999 9999999999999999999999997 599999
Q ss_pred ccceeecccccCCCCccccccChHHHHHHH--HHHHHHHHHHhhcCCCC-CCCceEEEEe--cccCccCCCCceeecccc
Q 007532 100 PISEFLTSSGTSAGERKLMPTIQEELDRRQ--LLYSLLMPVMNLYVPGL-DKGKALYFLF--VKSETRTPGGLLARPVLT 174 (599)
Q Consensus 100 pi~~f~~TSGTT~G~~K~IP~T~~~l~~~~--~~~~~~~~~~~~~~p~~-~~gk~l~~~~--~~~~~~t~~Gip~g~~s~ 174 (599)
|+.+|+.||||||+++|+||+|++++..+. .+...|...+.+.+|.. ..||.+++.+ .+....|++|+|+|++|+
T Consensus 81 ~~~~f~~TSGTTg~~~K~IP~T~~~l~~~~~~~~~~~~~~~l~~~~p~~~~~gk~~~l~~~~~~~~~~t~~Gi~~g~~s~ 160 (528)
T PF03321_consen 81 PPIYFALTSGTTGGKSKLIPYTKEFLKEFRRLGAIAAWLYYLYRNFPGLLFQGKSLYLSFSFAPPPLRTPGGIPIGSISG 160 (528)
T ss_dssp --SEEEEEEEEETTEEEEEEESHHHHHHHHHHHHHHHHH--HHHHSSS--TTSE--EEEE------EE-TTS-EEE-HHH
T ss_pred CCCeEEeCCCCCCCCCceeeccHHHHHHHHHHHHHHHHHHHHHhcCcccccCCcceEEEeecCCCcccCCCCeEEecccc
Confidence 999999999999555999999999998865 67788887888888987 5788666554 467788999999999999
Q ss_pred cccccccccCCCCCCCCccCCchhhhhccChhhhHHHHHHhhhccccceeEEeeccHHHHHHHHHHHHHHHHHHHHHHHh
Q 007532 175 SYYKSEHFKTRPYDPYNVYTSPNEAILCADSFQSMYVQMLCGLLEREQVLRLGAVFASGLLRAIRFLQLHWQALASDIES 254 (599)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~P~~v~~~~d~~~~~Y~~ll~~L~~~~~v~~i~~~~~~~ll~~~~~le~~w~~l~~dI~~ 254 (599)
..+++ .+.....+|++|.+++.+.|..+++||||||+|++++||+.|+++|+++|+.++++|+++|+++|+||++
T Consensus 161 ~~~~~-----~~~~~~~~~~~P~~~~~~~~~~~~~y~~ll~~l~~~~~l~~i~~~~p~~l~~~~~~le~~~~~l~~dI~~ 235 (528)
T PF03321_consen 161 IPYRM-----IPPWFRSWFTSPSEVIAAIDDWEAKYCHLLCALLQDRDLRMISGWFPSFLLLLFRLLEKHWEELVEDIRD 235 (528)
T ss_dssp HHHT-------SCCHHG-BSS-HHHHT-S-HHHHHHHHHHHHHHCGGGEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchhh-----ChHHHccCccCCHHHHhcccHHHHHHHHHHHHhhcccCcCEEEeeCHHHHHHHHHHHHHhhhHhhHHhcC
Confidence 87652 1211224799999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCchhhhhhcccCCCCHHHHHHHHHHhccccccccccccCCCCceeEEEEecchhhhHHHHHHHhCCCCCccc
Q 007532 255 GTLNQKITDPSIKDCLGKTLKPNTELAEFIRMECSKENWERIITRIWPNTKYLDVIVTGAMAQYIPTLDYYSGGKLPMAC 334 (599)
Q Consensus 255 gt~~~~i~~~~~r~~l~~~l~~~p~~A~~L~~~~~~~~~~g~~~~lWP~l~~l~~~~~g~~~~y~~~l~~~~g~~~~~~~ 334 (599)
|+++ .++|||+||++|+++|+++ +|++++|||||++|.||.+|++++|+++|++++|+ +++++
T Consensus 236 G~~~--------------~~~p~p~rA~~L~~~~~~~--~~~~~~lWP~L~~v~~~~~g~~~~y~~~l~~~~g~-~~~~~ 298 (528)
T PF03321_consen 236 GTLS--------------LLRPNPERAAELRAEFEKG--RGIPKRLWPNLKLVSCWGGGSMAPYAPKLREYFGG-VPIQS 298 (528)
T ss_dssp TS----------------C-S--HHHHHHHHHHHCCS--TTHHHHHSTT--EEEEE-SGGGGGGHHHHHHHHTT-S-EEE
T ss_pred Cccc--------------cCCCCHHHHHHHHHhhccc--CCCHHHhCCCCcEEEEEcCCChHHHHHHHHHHcCC-Cceee
Confidence 9888 3678999999999999985 78999999999999999999999999999999998 99999
Q ss_pred cccccccccccccCCCCCCCCCCceeeecCceEEEEeeCCCCCCCCCCCCCCCCcccccCCCCCeEEEEEeeccceeccc
Q 007532 335 TMYASSECYFGLNLNPICRPSEVSYTIMPNMAYFEFLPQEPSDSFGLTSSDPQPVDLVDVEMGKEYELVITTYAGLYRYR 414 (599)
Q Consensus 335 ~~Y~asEg~i~i~~~~~~~~~~~~~~l~~~~~ffEFip~~~~~~~~~~~~~~~~l~~~ev~~G~~YelviTt~~GLyRYr 414 (599)
.+|+||||+||+|+++ +..+|+|+|+.+||||||+++.+++ .++++++++++|||+|++|||||||.+||||||
T Consensus 299 ~~y~ASEg~i~i~~~~----~~~~~~l~~~~~ffEFip~~~~~~~--~~~~~~~l~~~ele~G~~YelviTt~~GLyRY~ 372 (528)
T PF03321_consen 299 KGYGASEGFIGIPLDP----EDPGYVLAPDSGFFEFIPVDEDEQN--PSEQPKTLLLHELEVGEEYELVITTNSGLYRYR 372 (528)
T ss_dssp -EEEETTEEEEEES-C----CC--EEE-TTSSEEEEEE-STT---------SSSEEGGG--TT-EEEEEEESTTS-SSEE
T ss_pred ccccccceEEEEecCC----CCCceEeecCCeEEEEEeccCCccc--ccCCCceecHHHhcCCCeEEEEEecccceeeee
Confidence 9999999999999883 4679999999999999999875310 013456999999999999999999999999999
Q ss_pred cCCEEEEeeccCCCCEEEEEeecCceeeccccccCHHHHHHHHHHHHHHhhhcCCeEEeeEEeec-CCCCCceEEEEEEE
Q 007532 415 VGDILRVIGFHNSAPQFHFVRRKNVLLSIESDKTDEAELQNAIDNASRLLREFNTSVGEYTSYAN-TKTIPGHYVIYWEL 493 (599)
Q Consensus 415 ~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~GEk~~e~~v~~av~~a~~~l~~~g~~l~~f~~~~~-~~~~p~hY~l~~E~ 493 (599)
+||||||+||++++|+|+|+||.++++|++|||++|++|++||.++++ ++|+++.+|++.++ .++.||||++|||+
T Consensus 373 iGDvVrv~gf~~~~P~i~F~~R~~~~l~l~gEkl~e~~v~~av~~~~~---~~~~~~~~f~~~~~~~~~~~~~Y~~~~e~ 449 (528)
T PF03321_consen 373 IGDVVRVTGFYNQTPRIEFVGRRGQVLSLFGEKLSEEQVQEAVARALQ---ETGLELRDFTVAPDPSSGNPPHYVLFWEL 449 (528)
T ss_dssp ECEEEEEEEEETTEEEEEEEEETTEEE-SSS--EEHHHHHHHHHHHHH---CTT-EEEEEEEEEE--SSSSBEEEEEEEE
T ss_pred cCCEEEEeeccCCCcEEEEeccCCceeecceeecCHHHHHHHHHHHHH---hcCCceeeEEEEeecccCCCCceEEEEEe
Confidence 999999999999999999999999999999999999999999999863 68999999999998 67899999999999
Q ss_pred eecCCCCCCChHHHHHHHHHHHHHh---ChhhHhccccCCccCCeEEEEeCCccHHHHHHHHHhc-CCCCCCCCCCcccC
Q 007532 494 LIKDSANSPTNEVLNQCCLAMEECL---NSVYRQGRVADNSIGPLEIRVVRNGTFEELMDYAISR-GASINQYKVPRCVN 569 (599)
Q Consensus 494 e~~~~~~~~~~~~l~~~~~~ld~~L---N~~Y~~~R~~~g~l~p~~v~iv~~gtF~~~~~~~~~~-G~~~~Q~K~Pr~~~ 569 (599)
+. . ++.++.|++.||++| |++|+.+|..+|+|+||+|++|++|+|++|+++++++ |++.+|||+|||++
T Consensus 450 ~~-----~--~~~~~~~~~~lD~~L~~~n~~Y~~~R~~~g~L~p~~v~~v~~g~f~~~~~~~~~~~G~~~~Q~K~pr~~~ 522 (528)
T PF03321_consen 450 EG-----E--PDDLEELAKALDESLQELNPHYRRARESDGQLGPPRVHIVRPGTFDALMERAVARLGGSAGQYKVPRLIR 522 (528)
T ss_dssp CS--------HHHHHHHHHHHHHCS----HHHHHHHHTSTSC---EEEEE-TTHHHHHHHHHHCT-T--SSS----SS--
T ss_pred CC-----C--chHHHHHHHHHHHHhhhCCchHHHHHhhcCCcCCcEEEEeCcchHHHHHHHHhhcCCCCccceeCccccC
Confidence 72 1 457889999999999 9999999954389999999999999999999999998 99999999999999
Q ss_pred CHhHHH
Q 007532 570 FTPIVE 575 (599)
Q Consensus 570 ~~~~~~ 575 (599)
++++.+
T Consensus 523 ~~~~~~ 528 (528)
T PF03321_consen 523 DREFVE 528 (528)
T ss_dssp TCHHHH
T ss_pred ccccCC
Confidence 999853
No 5
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]
Probab=99.97 E-value=5.5e-30 Score=272.80 Aligned_cols=400 Identities=18% Similarity=0.201 Sum_probs=262.4
Q ss_pred HHHHHh-HcHHHHHHHHHHHHHHh-cCCChHHHhc----CC--CCCCCHHHHhhcCCCCCccchhHHHH-HHHcCCCccc
Q 007532 25 FIEEMT-RNAEAVQEKVLAEILSR-NADVEYLKRY----KL--GGATDRETFKSKLPIIKYEDLQPEIQ-RIANGDRSAI 95 (599)
Q Consensus 25 ~~e~~~-~~~~~~Q~~~L~~iL~~-~~~T~ygr~~----gf--~~i~s~edF~~~vPl~~Yed~~p~ie-r~~~Ge~~~l 95 (599)
+.+.+. +.+++.|++.|+.+++. .+|++|||+| |+ ++|++.+|+. ++|+++++++|.... ++.+..
T Consensus 14 ~~e~~~r~eL~~lq~~rl~~~~k~~yeNsPfYr~~f~~~~v~p~~i~~l~Dl~-klP~t~K~~lre~ypf~~~~~~---- 88 (438)
T COG1541 14 EIETLSRKELEKLQEKRLKSTVKYVYENSPFYRKKFKEAGVDPDDIKTLEDLA-KLPFTTKDDLRENYPFGDFAVP---- 88 (438)
T ss_pred hhhhcCHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHcCCChHHhhCHHHHH-hCCCCcHHHHHHhCCccccccc----
Confidence 566666 77999999999999997 5999999987 43 3799999995 899999999988776 333332
Q ss_pred ccccccceeecccccCCCCccccccChHHHHHHHH--HHHHHHHHHhhcCCCCCCCceEEEEecccCccCCCCceeeccc
Q 007532 96 LSAHPISEFLTSSGTSAGERKLMPTIQEELDRRQL--LYSLLMPVMNLYVPGLDKGKALYFLFVKSETRTPGGLLARPVL 173 (599)
Q Consensus 96 l~~~pi~~f~~TSGTT~G~~K~IP~T~~~l~~~~~--~~~~~~~~~~~~~p~~~~gk~l~~~~~~~~~~t~~Gip~g~~s 173 (599)
.+.+.++..||||| |+|+.+|+|..++..+.. ++.++.+ +...|..+....+ .+...+| .|.
T Consensus 89 --~~~i~~ihaSSGTT-GkPt~~~~t~~D~~~wa~~~aR~~~~~-------g~~~gd~v~~~~~--yGl~tgg--~~~-- 152 (438)
T COG1541 89 --KEEIVRIHASSGTT-GKPTVFGYTAKDIERWAELLARSLYSA-------GVRKGDKVQNAYG--YGLFTGG--LGL-- 152 (438)
T ss_pred --ccceEEEEccCCCC-CCceeeecCHHHHHHHHHHHHHHHHHc-------cCCCCCEEEEEee--eccccCC--chh--
Confidence 44576799999999 899999999998776532 2222221 2333433333222 1111222 000
Q ss_pred ccccccccccCCCCCCCCccCCchhhhhccChhhhHHHHHHhhhccccceeEEeeccHHHHHHHHHHHHHHHHHHHHHHH
Q 007532 174 TSYYKSEHFKTRPYDPYNVYTSPNEAILCADSFQSMYVQMLCGLLEREQVLRLGAVFASGLLRAIRFLQLHWQALASDIE 253 (599)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~P~~v~~~~d~~~~~Y~~ll~~L~~~~~v~~i~~~~~~~ll~~~~~le~~w~~l~~dI~ 253 (599)
. |..-.+++ .+..+++..+ +.-++.|.
T Consensus 153 --~---------------------------------~ga~rig~-------~vip~~~g~~-----------~~~~~l~~ 179 (438)
T COG1541 153 --H---------------------------------YGAERIGA-------TVIPISGGNT-----------ERQLELMK 179 (438)
T ss_pred --H---------------------------------HHHHhhCE-------EEEccCCccH-----------HHHHHHHH
Confidence 0 00000111 1111111111 11112223
Q ss_pred hccCCCCCCCchhhhhhcccCCCCHHHHHHHHHHhccccccccccccCCCCceeEEEEecc---hhhhHHHHHHHhCCCC
Q 007532 254 SGTLNQKITDPSIKDCLGKTLKPNTELAEFIRMECSKENWERIITRIWPNTKYLDVIVTGA---MAQYIPTLDYYSGGKL 330 (599)
Q Consensus 254 ~gt~~~~i~~~~~r~~l~~~l~~~p~~A~~L~~~~~~~~~~g~~~~lWP~l~~l~~~~~g~---~~~y~~~l~~~~g~~~ 330 (599)
+. ..+.+. .+|+.+..|++.+++.|. ...++ + |+.++.|+ ....++.+++.+| +
T Consensus 180 df----~~tvI~----------~tps~~l~lae~~~~~G~--~~~~~----~-lk~~i~gaE~~see~R~~ie~~~g--~ 236 (438)
T COG1541 180 DF----KPTVIA----------ATPSYLLYLAEEAEEEGI--DPDKL----S-LKKGIFGAEPWSEEMRKVIENRFG--C 236 (438)
T ss_pred hc----CCcEEE----------EChHHHHHHHHHHHHcCC--Chhhc----c-eeEEEEecccCCHHHHHHHHHHhC--C
Confidence 22 233333 499999999999988641 23333 3 77888887 3688999999998 6
Q ss_pred CccccccccccccccccCCCCCCCCCCceeeecCceEEEEeeCCCCCCCCCCCCCCCCcccccCCCCCeEEEEEeec--c
Q 007532 331 PMACTMYASSECYFGLNLNPICRPSEVSYTIMPNMAYFEFLPQEPSDSFGLTSSDPQPVDLVDVEMGKEYELVITTY--A 408 (599)
Q Consensus 331 ~~~~~~Y~asEg~i~i~~~~~~~~~~~~~~l~~~~~ffEFip~~~~~~~~~~~~~~~~l~~~ev~~G~~YelviTt~--~ 408 (599)
+.+ +.||+||++..- ..+|... .++|++.+.-|+|-++|++.+ .|.+|+.||||+||+ .
T Consensus 237 ~~~-diYGltE~~g~g--~~eC~~~-~glhi~eD~~~~Ei~dP~t~e---------------~l~dge~GelV~T~L~~~ 297 (438)
T COG1541 237 KAF-DIYGLTEGFGPG--AGECTER-NGLHIWEDHFIFEIVDPETGE---------------QLPDGERGELVITTLTKE 297 (438)
T ss_pred cee-eccccccccCCc--ccccccc-cCCCcchhhceeeeecCCcCc---------------cCCCCCeeEEEEEecccc
Confidence 778 999999995431 2466554 489988898899999988752 367999999999986 3
Q ss_pred c--eeccccCCEEEEeeccCC----CC-EEEEEeecCceeeccccccCHHHHHHHHHHHHHHhhhcCCeEEeeEEeecCC
Q 007532 409 G--LYRYRVGDILRVIGFHNS----AP-QFHFVRRKNVLLSIESDKTDEAELQNAIDNASRLLREFNTSVGEYTSYANTK 481 (599)
Q Consensus 409 G--LyRYr~GDvV~v~gf~~~----~P-~i~f~gR~~~~l~~~GEk~~e~~v~~av~~a~~~l~~~g~~l~~f~~~~~~~ 481 (599)
| |+||||||++.+....-. .| ..++.||.+||+.+.|.++++.+|+.+|.+... +.- +|.+.....
T Consensus 298 ~~PlIRYrtgDit~i~~~~C~cGr~~~ri~~I~GR~dD~l~~~G~~vfp~~ie~~l~~~~~------~~~-~yqi~~~~~ 370 (438)
T COG1541 298 GMPLIRYRTGDITVILSDPCGCGRTHRRIERIEGRSDDMLIVRGVNVFPSQIERVLLQIPE------VTP-HYQIILTRN 370 (438)
T ss_pred CcceEEEEcCCeeEecccCCCCCCccccccccCcccccEEEECCEEeCHHHHHHHHhcccC------CCc-eEEEEEecC
Confidence 3 999999999999973312 23 348999999999999999999999999977532 111 788776653
Q ss_pred CCCceEEEEEEEeecCCCCCCChHHHHHHHHHHHHHhChhhHhccccCCccCCeEEEEeCCccHHHHHHHHHhcCCCCCC
Q 007532 482 TIPGHYVIYWELLIKDSANSPTNEVLNQCCLAMEECLNSVYRQGRVADNSIGPLEIRVVRNGTFEELMDYAISRGASINQ 561 (599)
Q Consensus 482 ~~p~hY~l~~E~e~~~~~~~~~~~~l~~~~~~ld~~LN~~Y~~~R~~~g~l~p~~v~iv~~gtF~~~~~~~~~~G~~~~Q 561 (599)
+.-.+-++-+|++.+ . ........+++.+-..+ .... .. .++|.+|.+|+.++. .|
T Consensus 371 ~~~d~L~V~vE~~~~-~---~~~~~~~~~~~~l~~~~-------~~~~-~~-~~~v~~v~~g~l~r~------~~----- 426 (438)
T COG1541 371 GGLDELTVRVELENE-A---EELEDERRLAKKLIKNI-------KSEL-GV-RVEVELVEPGELPRT------EG----- 426 (438)
T ss_pred CCCceEEEEEEecCc-c---cchHHHHHHHHHHHHHH-------Hhhc-CC-ceEEEEEeccceecc------cC-----
Confidence 334456677777521 1 11112222333444443 2222 24 789999999998864 23
Q ss_pred CCCCcccCCHh
Q 007532 562 YKVPRCVNFTP 572 (599)
Q Consensus 562 ~K~Pr~~~~~~ 572 (599)
|.+|++..+.
T Consensus 427 -K~krvvd~r~ 436 (438)
T COG1541 427 -KAKRVVDKRK 436 (438)
T ss_pred -ceeEEEEecc
Confidence 8888876553
No 6
>TIGR03335 F390_ftsA coenzyme F390 synthetase. This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen.
Probab=99.96 E-value=3e-27 Score=259.42 Aligned_cols=397 Identities=15% Similarity=0.136 Sum_probs=231.3
Q ss_pred HHHh-HcHHHHHHHHHHHHHHhc-CCChHHHhc----CCC--CCCCHHHHhhcCCCCCccchhHHHHHHHcCCCcccc--
Q 007532 27 EEMT-RNAEAVQEKVLAEILSRN-ADVEYLKRY----KLG--GATDRETFKSKLPIIKYEDLQPEIQRIANGDRSAIL-- 96 (599)
Q Consensus 27 e~~~-~~~~~~Q~~~L~~iL~~~-~~T~ygr~~----gf~--~i~s~edF~~~vPl~~Yed~~p~ier~~~Ge~~~ll-- 96 (599)
|.+. .+.++.|.+.|+++|++. ++++|||++ |++ +|++++||+ ++|+++++|++...... .+.=.++
T Consensus 7 e~~~~~~l~~~q~~rl~~~l~~a~~~spfYr~~~~~~g~~p~~i~sl~dl~-~lP~~~k~~lr~~~p~~--~~~~~~~~~ 83 (445)
T TIGR03335 7 ETMERGELDALVEERIRYTVHYAAEHSPFYKKWFQENNISPSDIKSHEDLL-ELPVISGEVIRKNQPPV--TDDFMFKSA 83 (445)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHcCCChhhCCCHHHHH-HCCCCCHHHHHhcCCcc--ccccccccC
Confidence 4444 678999999999999975 899999974 664 799999996 79999999998764100 0000111
Q ss_pred cccccceeecccccCCCCccccccChHHHHHHHHHHHHHHHHHhhcCCCCCCCceEEEEecccCccCCCCceeecccccc
Q 007532 97 SAHPISEFLTSSGTSAGERKLMPTIQEELDRRQLLYSLLMPVMNLYVPGLDKGKALYFLFVKSETRTPGGLLARPVLTSY 176 (599)
Q Consensus 97 ~~~pi~~f~~TSGTT~G~~K~IP~T~~~l~~~~~~~~~~~~~~~~~~p~~~~gk~l~~~~~~~~~~t~~Gip~g~~s~~~ 176 (599)
..+.+.++..||||| |+||.+++|+..+..+...... .+.. -++..|..+...+ + .....++..
T Consensus 84 ~~~~i~~i~~TSGTT-G~Pk~v~~T~~dl~~~~~~~~r--~~~~---~G~~~gD~vl~~~-~-~~~~~g~~~-------- 147 (445)
T TIGR03335 84 DWKDIYTIHETSGTS-GTPKSFFLTWDDWKRYAEKYAR--SFVS---QGFTAGDRMVICA-S-YGMNVGANT-------- 147 (445)
T ss_pred CHHHeEEEEeCCCCC-CCcceeeecHHHHHHHHHHHHH--HHHH---cCCCCCCeEEEEe-c-CCcchhHHH--------
Confidence 234466788899999 8999999999977554221110 1111 1222343322221 1 000000000
Q ss_pred cccccccCCCCCCCCccCCchhhhhccChhhhHHHHHHhhhccccceeEEeeccHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 007532 177 YKSEHFKTRPYDPYNVYTSPNEAILCADSFQSMYVQMLCGLLEREQVLRLGAVFASGLLRAIRFLQLHWQALASDIESGT 256 (599)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~P~~v~~~~d~~~~~Y~~ll~~L~~~~~v~~i~~~~~~~ll~~~~~le~~w~~l~~dI~~gt 256 (599)
..+..+.++. ..+. .. .. +..++.|++.
T Consensus 148 -------------------------------~~~~~~~~Ga------~vi~-~~--~~-----------~~~~~~i~~~- 175 (445)
T TIGR03335 148 -------------------------------MTLAAREVGM------SIIP-EG--KC-----------TFPIRIIESY- 175 (445)
T ss_pred -------------------------------HHHHHHHcCC------EEEc-CC--ch-----------hHHHHHHHHh-
Confidence 0000011110 0010 00 00 0112223332
Q ss_pred CCCCCCCchhhhhhcccCCCCHHHHHHHHHHhccccccccccccCCCCceeEEEEecch---hhhHHHHHHHhCCCCCcc
Q 007532 257 LNQKITDPSIKDCLGKTLKPNTELAEFIRMECSKENWERIITRIWPNTKYLDVIVTGAM---AQYIPTLDYYSGGKLPMA 333 (599)
Q Consensus 257 ~~~~i~~~~~r~~l~~~l~~~p~~A~~L~~~~~~~~~~g~~~~lWP~l~~l~~~~~g~~---~~y~~~l~~~~g~~~~~~ 333 (599)
.++. +.+.|..+..|.+.+.+.+. -.. .++ ++.+++||. ...++.+++.+| ++++
T Consensus 176 ---~~t~----------l~~~ps~ll~La~~~~~~g~---~~~-~~~---lr~ii~gGE~l~~~~r~~ie~~~g--~~v~ 233 (445)
T TIGR03335 176 ---RPTG----------IVASVFKLLRLARRMKAEGI---DPA-ESS---IRRLVVGGESFADESRNYVEELWG--CEVY 233 (445)
T ss_pred ---CCCE----------EEECHHHHHHHHHHHHHcCC---Ccc-cCc---ceEEEEcCCCCCHHHHHHHHHHhC--CcEE
Confidence 1221 22367777777666654422 111 234 677777773 355678888886 7898
Q ss_pred ccccccccccccccCCCCCCCCCCceeeecCceEEEEeeCCCCCCCCCCCCCCCCcccccCCCCCeEEEEEeecc-----
Q 007532 334 CTMYASSECYFGLNLNPICRPSEVSYTIMPNMAYFEFLPQEPSDSFGLTSSDPQPVDLVDVEMGKEYELVITTYA----- 408 (599)
Q Consensus 334 ~~~Y~asEg~i~i~~~~~~~~~~~~~~l~~~~~ffEFip~~~~~~~~~~~~~~~~l~~~ev~~G~~YelviTt~~----- 408 (599)
+.||+||+.++ ..|.. ..+||+..+..++|.+++++. + .|++|+.||||+||+.
T Consensus 234 -~~YG~TE~~~~----~~c~~-~~g~h~~~d~~~vEIvDp~~~----------~-----~vp~Ge~GELvvT~L~~~~~r 292 (445)
T TIGR03335 234 -NTYGSTEGTMC----GECQA-VAGLHVPEDLVHLDVYDPRHQ----------R-----FLPDGECGRIVLTTLLKPGER 292 (445)
T ss_pred -ecCChhhhhhe----EEecC-CCCccccCCceEEEEEcCCCC----------C-----CCcCCCceEEEEEecCCCCcc
Confidence 89999998543 24432 457998888889999987543 1 2579999999999972
Q ss_pred -c--eeccccCCEEEEe-ecc----CCCCEEEEEeecCceeeccccccCHHHHHHHHHHHHHHhhhcCCeEEeeEEeecC
Q 007532 409 -G--LYRYRVGDILRVI-GFH----NSAPQFHFVRRKNVLLSIESDKTDEAELQNAIDNASRLLREFNTSVGEYTSYANT 480 (599)
Q Consensus 409 -G--LyRYr~GDvV~v~-gf~----~~~P~i~f~gR~~~~l~~~GEk~~e~~v~~av~~a~~~l~~~g~~l~~f~~~~~~ 480 (599)
| |+||||||++++. .-. ...|+|..+||.+||+.+.|.++++.+|+++|.+... . .++ -.+|.+..+.
T Consensus 293 ~~~PliRYrtgD~~~~~~~~~C~CGr~~~r~~~~gR~dd~~~~~g~~~~p~~ie~~l~~~~~-~--~~~-~~~~~~~~~~ 368 (445)
T TIGR03335 293 CGSLLINYDTEDTTVVISRDRCPCGRTHMRILNPEREAETIWISGVPFNRVDVERAVFQREN-M--DSL-TGEYEAFLYG 368 (445)
T ss_pred CCceEEEeecCceEEEecCCCCCCCCCcceeCCCcccCceEEECCEEeCHHHHHHHHhccCC-C--CCC-CccEEEEEec
Confidence 2 9999999999974 211 1236787789999999999999999999999977310 0 011 1267776643
Q ss_pred CCCCceEEEEEEEeecCCCCCCChHHHHHHHHHHHHHhChhhHhccc--cCCccCCeEEEEeCCccHHH
Q 007532 481 KTIPGHYVIYWELLIKDSANSPTNEVLNQCCLAMEECLNSVYRQGRV--ADNSIGPLEIRVVRNGTFEE 547 (599)
Q Consensus 481 ~~~p~hY~l~~E~e~~~~~~~~~~~~l~~~~~~ld~~LN~~Y~~~R~--~~g~l~p~~v~iv~~gtF~~ 547 (599)
.. ..--.+-+++|..+ . .....+.+.+.+.+.+...++..+. +.+.+ .++|.+|++|++++
T Consensus 369 ~~-~~~~~~~v~~e~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 431 (445)
T TIGR03335 369 EE-EGEITLRVSLECED---K-DNCSIHDIQENFTGTFLKYKPELIGSYDEGIF-QILVNFTGPGELEL 431 (445)
T ss_pred CC-CCCceEEEEEEecC---c-ccchHHHHHHHHHHHHhhhhhhhhhhhhcceE-EEEEEEeCCCCccc
Confidence 21 11112334444312 1 1123334444555542122222110 12246 57899999999975
No 7
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions.
Probab=99.93 E-value=8.7e-24 Score=230.15 Aligned_cols=387 Identities=17% Similarity=0.170 Sum_probs=226.5
Q ss_pred HcHHHHHHHHHHHHHHhc-CCChHHHhc----CCC--CCCCHHHHhhcCCCCCccchhHHHHH-HHcCCCcccccccccc
Q 007532 31 RNAEAVQEKVLAEILSRN-ADVEYLKRY----KLG--GATDRETFKSKLPIIKYEDLQPEIQR-IANGDRSAILSAHPIS 102 (599)
Q Consensus 31 ~~~~~~Q~~~L~~iL~~~-~~T~ygr~~----gf~--~i~s~edF~~~vPl~~Yed~~p~ier-~~~Ge~~~ll~~~pi~ 102 (599)
++.++.|.+.|+++|+.+ ++++|||++ |++ +|++++||+ ++|++++++++...+. +... ..+.+.
T Consensus 6 ~~l~~~q~~~l~~~~~~a~~~~pfYr~~~~~~~i~~~~i~~~~dl~-~lP~~~K~~l~~~~~~~~~~~------~~~~~~ 78 (422)
T TIGR02155 6 DELRALQTQRLKWTVKHAYENVPHYRKAFDAAGVHPDDLQSLSDLA-KFPFTQKHDLRDNYPFGLFAV------PREQVV 78 (422)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHcCCChhhCCCHHHHH-HCCCCcHHHHhhcCCCcccCC------ChHHcE
Confidence 568899999999999985 899999975 553 799999995 7999999999865421 1111 233455
Q ss_pred eeecccccCCCCccccccChHHHHHHHHHHHHHHHHHhhcCCCCCCCceEEEEecccCccCCCCceeecccccccccccc
Q 007532 103 EFLTSSGTSAGERKLMPTIQEELDRRQLLYSLLMPVMNLYVPGLDKGKALYFLFVKSETRTPGGLLARPVLTSYYKSEHF 182 (599)
Q Consensus 103 ~f~~TSGTT~G~~K~IP~T~~~l~~~~~~~~~~~~~~~~~~p~~~~gk~l~~~~~~~~~~t~~Gip~g~~s~~~~~~~~~ 182 (599)
++..||||| |+||.+++|+..+........ .... +-++..|..++.. .......+|.+
T Consensus 79 ~~~~TSGTT-G~Pk~v~~t~~~~~~~~~~~~---~~~~--~~g~~~~d~~~~~--~~~~~~~~~~~-------------- 136 (422)
T TIGR02155 79 RIHASSGTT-GKPTVVGYTQNDIDTWSSVVA---RSIR--AAGGRPGDLIHNA--YGYGLFTGGLG-------------- 136 (422)
T ss_pred EEEECCCCC-CCCeEeccCHHHHHHHHHHHH---HHHH--HcCCCCCcEEEEc--cCccccchhHH--------------
Confidence 677899999 899999999987644322111 0110 1122223222211 00000001100
Q ss_pred cCCCCCCCCccCCchhhhhccChhhhHHHHHHhhhccccceeEEeeccHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCC
Q 007532 183 KTRPYDPYNVYTSPNEAILCADSFQSMYVQMLCGLLEREQVLRLGAVFASGLLRAIRFLQLHWQALASDIESGTLNQKIT 262 (599)
Q Consensus 183 ~~~~~~~~~~~~~P~~v~~~~d~~~~~Y~~ll~~L~~~~~v~~i~~~~~~~ll~~~~~le~~w~~l~~dI~~gt~~~~i~ 262 (599)
..|..+.++.. +-.+....+ +.+++.|++. +++
T Consensus 137 -------------------------~~~~~~~~g~~----~~~~~~~~~--------------~~~~~~i~~~----~~t 169 (422)
T TIGR02155 137 -------------------------AHYGAEKLGCT----VVPISGGQT--------------EKQVQLIQDF----KPD 169 (422)
T ss_pred -------------------------HHHHHHHcCcE----EEecCCCCH--------------HHHHHHHHHH----CCC
Confidence 00000111100 000000111 2233444443 232
Q ss_pred CchhhhhhcccCCCCHHHHHHHHHHhccccccccccccCCCCceeEEEEecch---hhhHHHHHHHhCCCCCcccccccc
Q 007532 263 DPSIKDCLGKTLKPNTELAEFIRMECSKENWERIITRIWPNTKYLDVIVTGAM---AQYIPTLDYYSGGKLPMACTMYAS 339 (599)
Q Consensus 263 ~~~~r~~l~~~l~~~p~~A~~L~~~~~~~~~~g~~~~lWP~l~~l~~~~~g~~---~~y~~~l~~~~g~~~~~~~~~Y~a 339 (599)
. +...|..+..|.+...+.+. .+.. +. ++.+++||. ...++.+++.+| ++++ +.||+
T Consensus 170 ~----------l~~~Ps~l~~L~~~~~~~~~--~~~~--~~---lr~i~~~ge~l~~~~~~~i~~~~g--~~v~-~~YG~ 229 (422)
T TIGR02155 170 I----------IMVTPSYMLNLLEELKRMGI--DPAQ--TS---LQVGIFGAEPWTNAMRKEIEARLG--MKAT-DIYGL 229 (422)
T ss_pred E----------EEEcHHHHHHHHHHHHHcCC--Cccc--Cc---eEEEEEeCCcCCHHHHHHHHHHhC--CceE-ecccc
Confidence 2 23478888877765544321 1111 13 677777763 466778888886 7888 89999
Q ss_pred cccc-ccccCCCCCCCCCCceeeecCceEEEEeeCCCCCCCCCCCCCCCCcccccCCCCCeEEEEEeeccc----eeccc
Q 007532 340 SECY-FGLNLNPICRPSEVSYTIMPNMAYFEFLPQEPSDSFGLTSSDPQPVDLVDVEMGKEYELVITTYAG----LYRYR 414 (599)
Q Consensus 340 sEg~-i~i~~~~~~~~~~~~~~l~~~~~ffEFip~~~~~~~~~~~~~~~~l~~~ev~~G~~YelviTt~~G----LyRYr 414 (599)
||+. .++. ..|.....++++..+..+.|.+++++.. +|.+|+.||||+|+... +.||+
T Consensus 230 tE~~~~~~~--~~~~~~~~g~~~~~~~~~~eivd~~~g~---------------~v~~Ge~Gelvvt~~~~~~~p~~ry~ 292 (422)
T TIGR02155 230 SEVIGPGVA--MECVETQDGLHIWEDHFYPEIIDPHTGE---------------VLPDGEEGELVFTTLTKEALPVIRYR 292 (422)
T ss_pred hhhcCCcee--ecccccCCCceEecCeeEEEEECCCCCC---------------CCCCCCeeEEEEecCCccccceeeEE
Confidence 9973 1221 2342234578877666788998765431 35789999999997422 77999
Q ss_pred cCCEEEEeec-cCCCCE-EEEEeecCceeeccccccCHHHHHHHHHHHHHHhhhcCCeEEeeEEeecCCCCCceEEEEEE
Q 007532 415 VGDILRVIGF-HNSAPQ-FHFVRRKNVLLSIESDKTDEAELQNAIDNASRLLREFNTSVGEYTSYANTKTIPGHYVIYWE 492 (599)
Q Consensus 415 ~GDvV~v~gf-~~~~P~-i~f~gR~~~~l~~~GEk~~e~~v~~av~~a~~~l~~~g~~l~~f~~~~~~~~~p~hY~l~~E 492 (599)
|||++++..- ....|+ +.|+||.+|++++.|+++++.+|+.+|.+. .++. ..|.+..+..+.+-..++++|
T Consensus 293 TGDl~~~~~~~Gr~~~~~~~i~GR~~d~i~~~G~~v~p~eie~~l~~~------~~v~-~~~q~~~~~~~~~~~~~~~v~ 365 (422)
T TIGR02155 293 TRDLTRLLPGTARTMRRMDRITGRSDDMLIIRGVNVFPTQLEEVILKM------DELS-PHYQLELTRNGHMDELTLKVE 365 (422)
T ss_pred cCcEEEEECCCCCcccccccccCccCCeEEECCEEECHHHHHHHHHhC------cCcC-CCEEEEEEcCCCccEEEEEEE
Confidence 9999998641 022343 479999999999999999999999999763 2221 145555443222235666777
Q ss_pred EeecCCCCCCChHHHHHHHHHHHHHhChhhHhccccCCccCCeEEEEeCCccHHH
Q 007532 493 LLIKDSANSPTNEVLNQCCLAMEECLNSVYRQGRVADNSIGPLEIRVVRNGTFEE 547 (599)
Q Consensus 493 ~e~~~~~~~~~~~~l~~~~~~ld~~LN~~Y~~~R~~~g~l~p~~v~iv~~gtF~~ 547 (599)
... +.......+..+.+.+.|.+.+ |... .+ .++|.++.+|++.+
T Consensus 366 ~~~-~~~~~~~~~~~~~~~~~i~~~~-------~~~~-~~-~~~v~~~~~~~lp~ 410 (422)
T TIGR02155 366 LKP-ESYTLRLHEQASLLAGEIQHTI-------KQEV-GV-SMDVHLVEPGSLPR 410 (422)
T ss_pred Eec-CcccccchHHHHHHHHHHHHHH-------Hhcc-Cc-EEEEEEECCCCccC
Confidence 642 1100011223333445555555 4333 23 36899999999874
No 8
>TIGR02304 aden_form_hyp probable adenylate-forming enzyme. Members of this family form a distinct clade within a larger family of proteins that also includes coenzyme F390 synthetase, an enzyme known in Methanobacterium thermoautotrophicum and a few other methanogenic archaea. That enzyme adenylates coenzyme F420 to F390, a reversible process, during oxygen stress. Other informative homologies include domains of the non-ribosomal peptide synthetases involved in activation by adenylation. The family defined by this model is likely to be of an adenylate-forming enzyme related to but distinct from coenzyme F390 synthetase.
Probab=99.88 E-value=1e-20 Score=205.57 Aligned_cols=315 Identities=18% Similarity=0.255 Sum_probs=202.4
Q ss_pred HcHHHHHHHHHHHHHHhc-CCChHHHhcCCCCCCCHHHHhhcCCCCCccchhHHHHHHHc-CCC-ccc----cc------
Q 007532 31 RNAEAVQEKVLAEILSRN-ADVEYLKRYKLGGATDRETFKSKLPIIKYEDLQPEIQRIAN-GDR-SAI----LS------ 97 (599)
Q Consensus 31 ~~~~~~Q~~~L~~iL~~~-~~T~ygr~~gf~~i~s~edF~~~vPl~~Yed~~p~ier~~~-Ge~-~~l----l~------ 97 (599)
+..++.|++.|+++|+.. ++++|||++. ++ ++ +++|++++++++..-+++.. |=+ +.+ +.
T Consensus 22 ~~l~~~Q~~rL~~ll~~a~~~sPfYr~~~--~~----~l-~~lPvl~K~~~~~~fd~~~t~~l~~~~~~~~a~~~e~~r~ 94 (430)
T TIGR02304 22 EALENWQAKQLEKFLQFVLSHSPWFQRYH--TI----PF-NQWPMMDKALMMEHFDELNTAGLKKDEALDCAMRSEKTRD 94 (430)
T ss_pred HHHHHHHHHHHHHHHHHHHhcChhhhhcc--CC----CH-HHCCCcCHHHHHHHHHHhhccCCChhhhhHHhhhhhhhcc
Confidence 568999999999999985 9999999973 33 57 48999999999999999873 211 010 00
Q ss_pred ----ccccceeecccccCCCCccccccChHHHHHHHHHHHHHHHHHhhcCC-CCCCC-ceEEEEecccCccCCCCceeec
Q 007532 98 ----AHPISEFLTSSGTSAGERKLMPTIQEELDRRQLLYSLLMPVMNLYVP-GLDKG-KALYFLFVKSETRTPGGLLARP 171 (599)
Q Consensus 98 ----~~pi~~f~~TSGTT~G~~K~IP~T~~~l~~~~~~~~~~~~~~~~~~p-~~~~g-k~l~~~~~~~~~~t~~Gip~g~ 171 (599)
.+++ ....||||| |+|-.+.++++....+.+ . .+.+..| ++..| +..++.-+...
T Consensus 95 f~~~~~~~-~v~~TSGSS-G~p~~f~~~~~~~~~~~a-~-----~~~~~~~~g~~~g~r~a~~~~~~~~----------- 155 (430)
T TIGR02304 95 FKPCVGNI-SVGLSSGTS-GRRGLFVVSPEEQQMWAG-G-----ILAKVLPDGLFAKHRIAFFLRADNN----------- 155 (430)
T ss_pred cccccCcE-EEEECCCCC-CCceEEEECHHHHHHHHH-H-----HHhhhCccccccCCcEEEEEccChh-----------
Confidence 1233 567899999 899999999986533211 1 1112223 33343 44444211110
Q ss_pred ccccccccccccCCCCCCCCccCCchhhhhccChhhhHHHHHHhhhccccceeEEeeccHHHH-HHHHHHHHHHHHHHHH
Q 007532 172 VLTSYYKSEHFKTRPYDPYNVYTSPNEAILCADSFQSMYVQMLCGLLEREQVLRLGAVFASGL-LRAIRFLQLHWQALAS 250 (599)
Q Consensus 172 ~s~~~~~~~~~~~~~~~~~~~~~~P~~v~~~~d~~~~~Y~~ll~~L~~~~~v~~i~~~~~~~l-l~~~~~le~~w~~l~~ 250 (599)
.+. ...++ .+ +..+++. +.+++.++
T Consensus 156 ----ly~--~~~~~-----------------------------------------------~~~~~~~~l~-~~~~~~l~ 181 (430)
T TIGR02304 156 ----LYQ--SVNNR-----------------------------------------------WISLDFFDLL-APFQAHIK 181 (430)
T ss_pred ----HHH--HHHhc-----------------------------------------------cceeeecCCC-cCHHHHHH
Confidence 000 00000 00 1122223 44677777
Q ss_pred HHHhccCCCCCCCchhhhhhcccCCCCHHHHHHHHHHhccccccccccccCCCCceeEEEEecch---hhhHHHHHHHhC
Q 007532 251 DIESGTLNQKITDPSIKDCLGKTLKPNTELAEFIRMECSKENWERIITRIWPNTKYLDVIVTGAM---AQYIPTLDYYSG 327 (599)
Q Consensus 251 dI~~gt~~~~i~~~~~r~~l~~~l~~~p~~A~~L~~~~~~~~~~g~~~~lWP~l~~l~~~~~g~~---~~y~~~l~~~~g 327 (599)
.|.+. +|.+ |.+.|+.+.+|++...+++ + ++ . ++.++++|. ...++.|++.||
T Consensus 182 ~L~~~-----------~P~~---L~g~pS~l~~LA~~~~~~~---l--~~--~---~k~ii~~~E~l~~~~r~~Ie~~fg 237 (430)
T TIGR02304 182 RLNQR-----------KPSI---IVAPPSVLRALALEVMEGE---L--TI--K---PKKVISVAEVLEPQDRELIRNVFK 237 (430)
T ss_pred HHHHh-----------CCCE---EEEcHHHHHHHHHHHHhcC---C--CC--C---ceEEEEccCCCCHHHHHHHHHHhC
Confidence 77765 3322 4559999999998877642 2 22 2 456666652 456778999997
Q ss_pred CCCCccccccccccccccccCCCCCCCCCCceeeecCceEEEE--eeCCCCCCCCCCCCCCCCcccccCCCCCeEEEEEe
Q 007532 328 GKLPMACTMYASSECYFGLNLNPICRPSEVSYTIMPNMAYFEF--LPQEPSDSFGLTSSDPQPVDLVDVEMGKEYELVIT 405 (599)
Q Consensus 328 ~~~~~~~~~Y~asEg~i~i~~~~~~~~~~~~~~l~~~~~ffEF--ip~~~~~~~~~~~~~~~~l~~~ev~~G~~YelviT 405 (599)
++++ +.||+|||++| ..|+ +.+||+.++..|+|+ ++++. .++.|||
T Consensus 238 --~~V~-~~YG~tEg~la----~eC~--~g~lHl~ed~~~vE~~ivD~~~-----------------------~~~~ViT 285 (430)
T TIGR02304 238 --NTVH-QIYQATEGFLA----STCR--CGTLHLNEDLVHIEKQYLDEHK-----------------------RFVPIIT 285 (430)
T ss_pred --CCee-EccCCchhheE----EecC--CCCEEEccccEEEEeeEECCCC-----------------------ceEEEEe
Confidence 7888 89999998776 4564 357999999999994 54321 2345999
Q ss_pred eccc----eeccccCCEEEEeecc----CCCCEE-EEEeecCceeec---ccccc--CHHHHHHHHHHHHHHhhhcCCeE
Q 007532 406 TYAG----LYRYRVGDILRVIGFH----NSAPQF-HFVRRKNVLLSI---ESDKT--DEAELQNAIDNASRLLREFNTSV 471 (599)
Q Consensus 406 t~~G----LyRYr~GDvV~v~gf~----~~~P~i-~f~gR~~~~l~~---~GEk~--~e~~v~~av~~a~~~l~~~g~~l 471 (599)
++.. |+||+|||++++..-. ...|+| ++.||.+|++.+ .|.++ ++..+..+|.... .+ +
T Consensus 286 ~L~n~~~PlIRYrtGD~~~~~~~~C~CGr~~~~i~~I~GR~dD~l~~~~~~G~~v~v~p~~~~~~i~~~~-----~~--i 358 (430)
T TIGR02304 286 DFTRTTQPIVRYRLNDILVESEQPCSCGSATMAIERIEGRQDDIFQLITRSGDEQTVFPDFIRRVILFTL-----PL--I 358 (430)
T ss_pred cCCCccceEEeeeCCCEEEeCCCCCCCCCcccccCCccCccCCEEEEecCCCCeEEeCHHHHHHHHHhcC-----CC--C
Confidence 8743 9999999999886522 123567 599999999975 45554 8888888765432 12 4
Q ss_pred EeeEEeecCCCCCceEEEEE
Q 007532 472 GEYTSYANTKTIPGHYVIYW 491 (599)
Q Consensus 472 ~~f~~~~~~~~~p~hY~l~~ 491 (599)
.+|.+... .+++.+|.+
T Consensus 359 ~~yQi~Q~---~~~~l~v~~ 375 (430)
T TIGR02304 359 VEYRVLQT---GSAQLELIA 375 (430)
T ss_pred ceEEEEEc---cCCeEEEEE
Confidence 58887654 356665544
No 9
>COG1021 EntE Peptide arylation enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.59 E-value=3.5e-15 Score=154.71 Aligned_cols=134 Identities=22% Similarity=0.314 Sum_probs=100.1
Q ss_pred CCceeEEEEecch---hhhHHHHHHHhCCCCCccccccccccccccccCCCCCCCCCCceeeecCceEEEEeeCCCCCCC
Q 007532 303 NTKYLDVIVTGAM---AQYIPTLDYYSGGKLPMACTMYASSECYFGLNLNPICRPSEVSYTIMPNMAYFEFLPQEPSDSF 379 (599)
Q Consensus 303 ~l~~l~~~~~g~~---~~y~~~l~~~~g~~~~~~~~~Y~asEg~i~i~~~~~~~~~~~~~~l~~~~~ffEFip~~~~~~~ 379 (599)
.|+.++.+..||+ ...+++++..+| +.++ .++|..||.+.+. -.+++.+. +..+++ -|....++
T Consensus 303 ~LsSLrllQVGGarl~~~~Arrv~~~lg--C~LQ-QVFGMAEGLvnyT--RLDDp~E~---i~~TQG----rPlsP~DE- 369 (542)
T COG1021 303 DLSSLRLLQVGGARLSATLARRVPAVLG--CQLQ-QVFGMAEGLVNYT--RLDDPPEI---IIHTQG----RPLSPDDE- 369 (542)
T ss_pred CchheeEEeecCcccCHHHHhhchhhhC--chHH-HHhhhhhhhhccc--ccCCchHh---eeecCC----CcCCCcce-
Confidence 4566788888985 456788888887 6888 9999999988764 22222121 122333 23322211
Q ss_pred CCCCCCCCCcc--cccCCCCCeEEEEEe---eccceec--------------cccCCEEEEeeccCCCCEEEEEeecCce
Q 007532 380 GLTSSDPQPVD--LVDVEMGKEYELVIT---TYAGLYR--------------YRVGDILRVIGFHNSAPQFHFVRRKNVL 440 (599)
Q Consensus 380 ~~~~~~~~~l~--~~ev~~G~~YelviT---t~~GLyR--------------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~ 440 (599)
-.+++ .++|.+||+++|... |+.|+|| ||+||+|+.+ ....+.+.||.||+
T Consensus 370 ------vrvvD~dg~pv~pGE~G~LltRGPYTirGYyrap~HNa~aF~a~GFYrsGD~V~~~----~dGyl~V~GR~KDQ 439 (542)
T COG1021 370 ------VRVVDADGNPVAPGEVGELLTRGPYTIRGYYRAPEHNARAFDADGFYRSGDLVRRD----PDGYLVVEGRVKDQ 439 (542)
T ss_pred ------eEEecCCCCCCCCCCcceeeecCCeeeeeeccCchhhhhccCcCCceecCceeEec----CCceEEEEeeehhh
Confidence 12333 357899999999985 8999999 9999999999 46799999999999
Q ss_pred eeccccccCHHHHHHHHHH
Q 007532 441 LSIESDKTDEAELQNAIDN 459 (599)
Q Consensus 441 l~~~GEk~~e~~v~~av~~ 459 (599)
||..||||-.+|||+.+..
T Consensus 440 INRgGEKIAAeEvEn~LL~ 458 (542)
T COG1021 440 INRGGEKIAAEEVENLLLR 458 (542)
T ss_pred hccccchhhHHHHHHHHhh
Confidence 9999999999999999876
No 10
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=99.40 E-value=3.6e-10 Score=129.24 Aligned_cols=251 Identities=16% Similarity=0.130 Sum_probs=136.1
Q ss_pred CHHHHHHHHHHhccccccccccccCCCCceeEEEEecch---hhhHHHHHHHhC-CCCCccccccccccccccc-cCCC-
Q 007532 277 NTELAEFIRMECSKENWERIITRIWPNTKYLDVIVTGAM---AQYIPTLDYYSG-GKLPMACTMYASSECYFGL-NLNP- 350 (599)
Q Consensus 277 ~p~~A~~L~~~~~~~~~~g~~~~lWP~l~~l~~~~~g~~---~~y~~~l~~~~g-~~~~~~~~~Y~asEg~i~i-~~~~- 350 (599)
.|...+.|.+...+. .... ++..++++.+||. ....+.+.+.++ .+++++ +.||+||+...+ ...+
T Consensus 337 ~P~~~~~l~~~~~~~-----~~~~--~l~~lr~i~~~G~~l~~~~~~~~~~~~~~~~~~i~-~~yG~TE~~~~~~~~~~~ 408 (625)
T TIGR02188 337 APTAIRALMRLGDEW-----VKKH--DLSSLRLLGSVGEPINPEAWMWYYKVVGKERCPIV-DTWWQTETGGIMITPLPG 408 (625)
T ss_pred CHHHHHHHHhcCCcc-----cccC--CccceeEEEEecCCCCHHHHHHHHHHcCCCCCceE-ecccccccCCceeecCCC
Confidence 666666665543221 1111 2334788888874 233455666654 237888 999999974321 1001
Q ss_pred --CCCCCCCceeeecCceEEEEeeCCCCCCCCCCCCCCCCcccccCC-CCCeEEEEEeec-----cceec----------
Q 007532 351 --ICRPSEVSYTIMPNMAYFEFLPQEPSDSFGLTSSDPQPVDLVDVE-MGKEYELVITTY-----AGLYR---------- 412 (599)
Q Consensus 351 --~~~~~~~~~~l~~~~~ffEFip~~~~~~~~~~~~~~~~l~~~ev~-~G~~YelviTt~-----~GLyR---------- 412 (599)
...++..+.. .|+. -.+.++.+ ..+++ +|+.|||+|+.. .|+|.
T Consensus 409 ~~~~~~~~~G~p-~~g~-~~~i~d~~----------------g~~~~~~g~~GeL~v~~p~p~~~~gy~~~~~~~~~~~~ 470 (625)
T TIGR02188 409 ATPTKPGSATLP-FFGI-EPAVVDEE----------------GNPVEGPGEGGYLVIKQPWPGMLRTIYGDHERFVDTYF 470 (625)
T ss_pred CCCcCCCcccCC-cCCc-eEEEECCC----------------CCCCCCCCCeEEEEEccCCCcccccccCChHHHHHHHh
Confidence 0111112221 1221 23334321 12346 899999999862 33332
Q ss_pred ------cccCCEEEEeeccCCCCEEEEEeecCceeeccccccCHHHHHHHHHHHHHHhhhcCCeEEeeEEeecCCCCCc-
Q 007532 413 ------YRVGDILRVIGFHNSAPQFHFVRRKNVLLSIESDKTDEAELQNAIDNASRLLREFNTSVGEYTSYANTKTIPG- 485 (599)
Q Consensus 413 ------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~GEk~~e~~v~~av~~a~~~l~~~g~~l~~f~~~~~~~~~p~- 485 (599)
|+|||+++++. ...+.|+||.+|++++.|+++.+.+|+++|.+. .+ |.+..|+.......+
T Consensus 471 ~~~~g~~~TGDl~~~d~----dG~l~i~GR~dd~i~~~G~ri~p~eIE~~l~~~------p~--V~e~~vvg~~~~~~g~ 538 (625)
T TIGR02188 471 SPFPGYYFTGDGARRDK----DGYIWITGRVDDVINVSGHRLGTAEIESALVSH------PA--VAEAAVVGIPDDIKGQ 538 (625)
T ss_pred ccCCCEEECCceEEEcC----CCcEEEEecccCEEEeCCEEECHHHHHHHHHhC------CC--cceEEEEeeEcCCCCe
Confidence 89999999873 468999999999999999999999999999752 22 345554331111122
Q ss_pred eEEEEEEEeecCCCCCCChHHHHHHHHHHHHHhChhhHhccccCCccCCeEEEEe------CCccHHHHHHHHHhcCCCC
Q 007532 486 HYVIYWELLIKDSANSPTNEVLNQCCLAMEECLNSVYRQGRVADNSIGPLEIRVV------RNGTFEELMDYAISRGASI 559 (599)
Q Consensus 486 hY~l~~E~e~~~~~~~~~~~~l~~~~~~ld~~LN~~Y~~~R~~~g~l~p~~v~iv------~~gtF~~~~~~~~~~G~~~ 559 (599)
.-+.|+.+.. + ...+.+..+++.+.+.+.|.+ | ..|-.|.+| ..|-..+-.-..+..|..
T Consensus 539 ~~~a~vv~~~-~--~~~~~~~~~~l~~~~~~~l~~-~---------~~P~~i~~v~~lP~t~sGKi~r~~l~~~~~~~~- 604 (625)
T TIGR02188 539 AIYAFVTLKD-G--YEPDDELRKELRKHVRKEIGP-I---------AKPDKIRFVPGLPKTRSGKIMRRLLRKIAAGEE- 604 (625)
T ss_pred EEEEEEEeCC-C--CCCCHHHHHHHHHHHHhhcCC-C---------ccCcEEEECCCCCCCCCccchHHHHHHHHcCCC-
Confidence 2335666642 2 122223333444444444411 1 123333443 344444322112223432
Q ss_pred CCCCCCcccCCHhHHHHHhc
Q 007532 560 NQYKVPRCVNFTPIVELLDS 579 (599)
Q Consensus 560 ~Q~K~Pr~~~~~~~~~~L~~ 579 (599)
.+++.+--+.|++.++.+++
T Consensus 605 ~~~~~~~~~~~p~~~~~~~~ 624 (625)
T TIGR02188 605 EILGDTSTLEDPSVVEELIE 624 (625)
T ss_pred CCCCCcccccCHHHHHHHHh
Confidence 23566777789999988864
No 11
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=99.40 E-value=3.3e-10 Score=129.90 Aligned_cols=230 Identities=17% Similarity=0.165 Sum_probs=127.7
Q ss_pred eeEEEEecch---hhhHHHHHHHhC-CCCCccccccccccccccccC-CC---CCCCCCCceeeecCceEEEEeeCCCCC
Q 007532 306 YLDVIVTGAM---AQYIPTLDYYSG-GKLPMACTMYASSECYFGLNL-NP---ICRPSEVSYTIMPNMAYFEFLPQEPSD 377 (599)
Q Consensus 306 ~l~~~~~g~~---~~y~~~l~~~~g-~~~~~~~~~Y~asEg~i~i~~-~~---~~~~~~~~~~l~~~~~ffEFip~~~~~ 377 (599)
.++.+.+||. ....+.+.+.++ .+++++ +.||+||+...+.. .+ .+.+...+.. +|+. -++.++.+.
T Consensus 368 ~lr~i~~~Ge~l~~~~~~~~~~~~~~~~~~i~-~~YG~TE~~~~~~~~~~~~~~~~~~~vG~p-~~g~-~~~i~d~~g-- 442 (637)
T PRK00174 368 SLRLLGSVGEPINPEAWEWYYKVVGGERCPIV-DTWWQTETGGIMITPLPGATPLKPGSATRP-LPGI-QPAVVDEEG-- 442 (637)
T ss_pred ceeEEEEeCCCCCHHHHHHHHHHhCCCCCceE-ecccccccCCceEecCCCCCCcCCCcccCC-CCCc-eEEEECCCC--
Confidence 3777787774 234456666664 237888 99999998432110 01 1111122221 2222 234443221
Q ss_pred CCCCCCCCCCCcccccCCCCCeEEEEEeec-----ccee----------------ccccCCEEEEeeccCCCCEEEEEee
Q 007532 378 SFGLTSSDPQPVDLVDVEMGKEYELVITTY-----AGLY----------------RYRVGDILRVIGFHNSAPQFHFVRR 436 (599)
Q Consensus 378 ~~~~~~~~~~~l~~~ev~~G~~YelviTt~-----~GLy----------------RYr~GDvV~v~gf~~~~P~i~f~gR 436 (599)
.++..|+.|||+|+.. .|+| .|+|||++++. ....+.|+||
T Consensus 443 --------------~~~~~g~~Gel~v~g~~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~d----~dG~l~~~GR 504 (637)
T PRK00174 443 --------------NPLEGGEGGNLVIKDPWPGMMRTIYGDHERFVKTYFSTFKGMYFTGDGARRD----EDGYYWITGR 504 (637)
T ss_pred --------------CCCCCCCcEEEEEcCCCCcccccccCCHHHHHHhhhcCCCCEEECCceEEEc----CCCcEEEEEe
Confidence 2356899999999851 2222 19999999987 3568999999
Q ss_pred cCceeeccccccCHHHHHHHHHHHHHHhhhcCCeEEeeEEeecCCCCCc-eEEEEEEEeecCCCCCCChHHHHHHHHHHH
Q 007532 437 KNVLLSIESDKTDEAELQNAIDNASRLLREFNTSVGEYTSYANTKTIPG-HYVIYWELLIKDSANSPTNEVLNQCCLAME 515 (599)
Q Consensus 437 ~~~~l~~~GEk~~e~~v~~av~~a~~~l~~~g~~l~~f~~~~~~~~~p~-hY~l~~E~e~~~~~~~~~~~~l~~~~~~ld 515 (599)
.+|++++.|+++++.+|+++|.+. .+ |.+.+|+.......+ .-+.|+.+.. + ...+....+++.+.+.
T Consensus 505 ~dd~ik~~G~~v~p~eIE~~l~~~------~~--V~~~~Vvg~~~~~~g~~~~a~vv~~~-~--~~~~~~~~~~l~~~l~ 573 (637)
T PRK00174 505 VDDVLNVSGHRLGTAEIESALVAH------PK--VAEAAVVGRPDDIKGQGIYAFVTLKG-G--EEPSDELRKELRNWVR 573 (637)
T ss_pred cccEEEeCCEEECHHHHHHHHHhC------CC--cceEEEEeeEcCCCCeEEEEEEEECC-C--CCCCHHHHHHHHHHHH
Confidence 999999999999999999999652 22 334444332111122 2235555542 1 1222223334444444
Q ss_pred HHhChhhHhccccCCccCCeEEEEe------CCccHHHHHHHHHhcCCCCCCCCCCcccCCHhHHHHHhccc
Q 007532 516 ECLNSVYRQGRVADNSIGPLEIRVV------RNGTFEELMDYAISRGASINQYKVPRCVNFTPIVELLDSRT 581 (599)
Q Consensus 516 ~~LN~~Y~~~R~~~g~l~p~~v~iv------~~gtF~~~~~~~~~~G~~~~Q~K~Pr~~~~~~~~~~L~~~~ 581 (599)
+.|. .| ..|-.+.+| +.|-..+-.=....+|.. +.+.+.-+.|++.++.+.+.+
T Consensus 574 ~~l~-~~---------~~P~~i~~v~~lP~t~~GKi~R~~L~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 633 (637)
T PRK00174 574 KEIG-PI---------AKPDVIQFAPGLPKTRSGKIMRRILRKIAEGEE--ILGDTSTLADPSVVEKLIEAR 633 (637)
T ss_pred hhcC-Cc---------cCCCEEEEcCCCCCCCCcchHHHHHHHHHcCCC--CCCCcccccCHHHHHHHHHHH
Confidence 4441 11 124444444 344444321112233432 456677788899998887654
No 12
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=99.37 E-value=4.6e-11 Score=134.42 Aligned_cols=152 Identities=16% Similarity=0.235 Sum_probs=97.8
Q ss_pred CHHHHHHHHHHhccccccccccccCCCCceeEEEEecch---hhhHHHHHHHhCCCCCccccccccccccccccCCCCCC
Q 007532 277 NTELAEFIRMECSKENWERIITRIWPNTKYLDVIVTGAM---AQYIPTLDYYSGGKLPMACTMYASSECYFGLNLNPICR 353 (599)
Q Consensus 277 ~p~~A~~L~~~~~~~~~~g~~~~lWP~l~~l~~~~~g~~---~~y~~~l~~~~g~~~~~~~~~Y~asEg~i~i~~~~~~~ 353 (599)
.|..+..|.+.....+ .-.++ ++.+++||. ....+++++.+++ ++++ +.||+||+...+...+...
T Consensus 280 ~P~~~~~l~~~~~~~~------~~~~~---lr~i~~gG~~l~~~~~~~~~~~~~~-~~i~-~~YG~TE~~~~~~~~~~~~ 348 (539)
T PRK06334 280 TPVFFDYILKTAKKQE------SCLPS---LRFVVIGGDAFKDSLYQEALKTFPH-IQLR-QGYGTTECSPVITINTVNS 348 (539)
T ss_pred cHHHHHHHHHhhhhcc------ccccc---ccEEEECCccCCHHHHHHHHHHCCC-CeEE-ecccccccCceEEeccCCC
Confidence 6777776655433210 11234 778888884 3556777777766 8888 8999999843221111100
Q ss_pred ---CCCCceeeecCceEEEEeeCCCCCCCCCCCCCCCCcccccCCCCCeEEEEEee---cccee---------------c
Q 007532 354 ---PSEVSYTIMPNMAYFEFLPQEPSDSFGLTSSDPQPVDLVDVEMGKEYELVITT---YAGLY---------------R 412 (599)
Q Consensus 354 ---~~~~~~~l~~~~~ffEFip~~~~~~~~~~~~~~~~l~~~ev~~G~~YelviTt---~~GLy---------------R 412 (599)
+...|.. .|+.. +..++.+. ..+|.+|+.|||+|.. ..|+| -
T Consensus 349 ~~~~~~vG~p-~~g~~-v~i~d~~~---------------~~~~~~g~~Gel~v~g~~~~~GY~~~~~~~~~~~~~~~~w 411 (539)
T PRK06334 349 PKHESCVGMP-IRGMD-VLIVSEET---------------KVPVSSGETGLVLTRGTSLFSGYLGEDFGQGFVELGGETW 411 (539)
T ss_pred CCCCCcCcee-cCCCE-EEEEcCCC---------------CccCCCCceEEEEEecCcccccccCCcccccceeeCCcee
Confidence 1112222 22222 12232211 1246789999999965 24544 2
Q ss_pred cccCCEEEEeeccCCCCEEEEEeecCceeeccccccCHHHHHHHHHHH
Q 007532 413 YRVGDILRVIGFHNSAPQFHFVRRKNVLLSIESDKTDEAELQNAIDNA 460 (599)
Q Consensus 413 Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~GEk~~e~~v~~av~~a 460 (599)
|+|||++++.. ...+.|+||.+++++++|+++++.+||++|.+.
T Consensus 412 ~~TGD~g~~d~----~G~l~~~GR~~d~ik~~G~~v~p~eIE~~l~~~ 455 (539)
T PRK06334 412 YVTGDLGYVDR----HGELFLKGRLSRFVKIGAEMVSLEALESILMEG 455 (539)
T ss_pred EECCCEEEECC----CCeEEEEeccCCeEEECCEEECHHHHHHHHHHc
Confidence 99999999873 568999999999999999999999999999763
No 13
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=99.37 E-value=1.9e-10 Score=132.40 Aligned_cols=130 Identities=12% Similarity=0.090 Sum_probs=87.0
Q ss_pred ceeEEEEecch---hhhHHHHHHHhCCCCCccccccccccccccccCCCC---CCCCCCceeeecCceEEEEeeCCCCCC
Q 007532 305 KYLDVIVTGAM---AQYIPTLDYYSGGKLPMACTMYASSECYFGLNLNPI---CRPSEVSYTIMPNMAYFEFLPQEPSDS 378 (599)
Q Consensus 305 ~~l~~~~~g~~---~~y~~~l~~~~g~~~~~~~~~Y~asEg~i~i~~~~~---~~~~~~~~~l~~~~~ffEFip~~~~~~ 378 (599)
+.++.+.+||. ....+.+++.+| ++++ +.||.||+...+...+. .+....+.. .|.. -.+.++.+
T Consensus 380 ~~Lr~i~~~G~~l~~~~~~~~~~~~g--~~i~-~~yG~TE~~~~~~~~~~~~~~~~~s~G~p-~~g~-~~~i~d~~---- 450 (647)
T PTZ00237 380 SNLKEIWCGGEVIEESIPEYIENKLK--IKSS-RGYGQTEIGITYLYCYGHINIPYNATGVP-SIFI-KPSILSED---- 450 (647)
T ss_pred chheEEEecCccCCHHHHHHHHHhcC--CCEE-eeechHHhChhhhccCCCCCCCCCCCccC-cCCc-eEEEECCC----
Confidence 34777778874 244466667675 7888 99999998532211110 000111211 1211 23334321
Q ss_pred CCCCCCCCCCcccccCCCCCeEEEEEee------ccceec---------------cccCCEEEEeeccCCCCEEEEEeec
Q 007532 379 FGLTSSDPQPVDLVDVEMGKEYELVITT------YAGLYR---------------YRVGDILRVIGFHNSAPQFHFVRRK 437 (599)
Q Consensus 379 ~~~~~~~~~~l~~~ev~~G~~YelviTt------~~GLyR---------------Yr~GDvV~v~gf~~~~P~i~f~gR~ 437 (599)
..+|.+|+.|||+++. ..|+|+ |+|||+++++ ....+.|+||.
T Consensus 451 ------------g~~~~~ge~GEl~v~~p~~p~~~~gy~~~~~~~~~~f~~~~g~~~TGDlg~~d----~dG~l~i~GR~ 514 (647)
T PTZ00237 451 ------------GKELNVNEIGEVAFKLPMPPSFATTFYKNDEKFKQLFSKFPGYYNSGDLGFKD----ENGYYTIVSRS 514 (647)
T ss_pred ------------CCCCCCCCceEEEEeccCCchhhCceeCCHHHHHHHHhCCCCEEECCcEEEEC----CCCeEEEEecc
Confidence 1246789999999974 256663 8999999997 35789999999
Q ss_pred CceeeccccccCHHHHHHHHHH
Q 007532 438 NVLLSIESDKTDEAELQNAIDN 459 (599)
Q Consensus 438 ~~~l~~~GEk~~e~~v~~av~~ 459 (599)
+|+|++.|+++++.+||++|.+
T Consensus 515 dd~i~~~G~rI~p~eIE~~l~~ 536 (647)
T PTZ00237 515 DDQIKISGNKVQLNTIETSILK 536 (647)
T ss_pred CCEEEECCEEeCHHHHHHHHHh
Confidence 9999999999999999999975
No 14
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.35 E-value=6.5e-11 Score=133.75 Aligned_cols=151 Identities=20% Similarity=0.255 Sum_probs=98.4
Q ss_pred CHHHHHHHHHHhccccccccccccCCCCceeEEEEecch---hhhHHHHHHHhCCCCCccccccccccccccccCCCCC-
Q 007532 277 NTELAEFIRMECSKENWERIITRIWPNTKYLDVIVTGAM---AQYIPTLDYYSGGKLPMACTMYASSECYFGLNLNPIC- 352 (599)
Q Consensus 277 ~p~~A~~L~~~~~~~~~~g~~~~lWP~l~~l~~~~~g~~---~~y~~~l~~~~g~~~~~~~~~Y~asEg~i~i~~~~~~- 352 (599)
.|.....|.+...+.+. -+++ ++.+++||. ......+++.++ ++++ ..||+||+...+...+..
T Consensus 317 ~P~~~~~l~~~~~~~~~------~~~~---lr~i~~gg~~l~~~~~~~~~~~~~--~~i~-~~YG~TE~~~~~~~~~~~~ 384 (573)
T PRK05605 317 VPPLYEKIAEAAEERGV------DLSG---VRNAFSGAMALPVSTVELWEKLTG--GLLV-EGYGLTETSPIIVGNPMSD 384 (573)
T ss_pred hHHHHHHHHhCccccCC------Cchh---ccEEEECCCcCCHHHHHHHHHHhC--CCee-cccccchhchhhhcCCccc
Confidence 66666666554333211 1234 677788874 345566666665 6788 899999984322111111
Q ss_pred --CCCCCceeeecCceEEEEeeCCCCCCCCCCCCCCCCcccccCCCCCeEEEEEee---cccee-------------ccc
Q 007532 353 --RPSEVSYTIMPNMAYFEFLPQEPSDSFGLTSSDPQPVDLVDVEMGKEYELVITT---YAGLY-------------RYR 414 (599)
Q Consensus 353 --~~~~~~~~l~~~~~ffEFip~~~~~~~~~~~~~~~~l~~~ev~~G~~YelviTt---~~GLy-------------RYr 414 (599)
.+...+. ..|+. .++.+++++.+ .++..|+.|||+|++ ..|+| .|+
T Consensus 385 ~~~~~~~G~-~~~~~-~~~i~d~~~~~--------------~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~ 448 (573)
T PRK05605 385 DRRPGYVGV-PFPDT-EVRIVDPEDPD--------------ETMPDGEEGELLVRGPQVFKGYWNRPEETAKSFLDGWFR 448 (573)
T ss_pred CCcCCcccc-CCCCC-EEEEEcCCCCC--------------ccCCCCCeeEEEEecCchhhhhcCChhHhhhcccCCCcc
Confidence 1111222 23333 45666654311 135788999999985 35666 399
Q ss_pred cCCEEEEeeccCCCCEEEEEeecCceeeccccccCHHHHHHHHHH
Q 007532 415 VGDILRVIGFHNSAPQFHFVRRKNVLLSIESDKTDEAELQNAIDN 459 (599)
Q Consensus 415 ~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~GEk~~e~~v~~av~~ 459 (599)
|||++++.. ...+.|+||.+|+++++|+++++.+|+++|..
T Consensus 449 TGD~~~~~~----~g~l~i~gR~dd~i~~~G~~v~p~eIE~~l~~ 489 (573)
T PRK05605 449 TGDVVVMEE----DGFIRIVDRIKELIITGGFNVYPAEVEEVLRE 489 (573)
T ss_pred cCCEEEEcC----CCcEEEEeccccceeeCCEEECHHHHHHHHHh
Confidence 999999973 35899999999999999999999999999965
No 15
>PRK07529 AMP-binding domain protein; Validated
Probab=99.33 E-value=3.8e-10 Score=129.49 Aligned_cols=134 Identities=19% Similarity=0.251 Sum_probs=90.7
Q ss_pred eeEEEEecch---hhhHHHHHHHhCCCCCccccccccccccccccCCCCC---CCCCCceeeecCceEEEEeeCCCCCCC
Q 007532 306 YLDVIVTGAM---AQYIPTLDYYSGGKLPMACTMYASSECYFGLNLNPIC---RPSEVSYTIMPNMAYFEFLPQEPSDSF 379 (599)
Q Consensus 306 ~l~~~~~g~~---~~y~~~l~~~~g~~~~~~~~~Y~asEg~i~i~~~~~~---~~~~~~~~l~~~~~ffEFip~~~~~~~ 379 (599)
.++.+++||. ...++++++.++ ++++ +.||+||+.......+.. .+...|.. +|.. -+.++..++.+
T Consensus 334 slr~v~~gg~~l~~~l~~~~~~~~g--~~l~-~~YG~TE~~~~~~~~~~~~~~~~~svG~~-~p~~-~v~i~~~d~~g-- 406 (632)
T PRK07529 334 SLRYALCGAAPLPVEVFRRFEAATG--VRIV-EGYGLTEATCVSSVNPPDGERRIGSVGLR-LPYQ-RVRVVILDDAG-- 406 (632)
T ss_pred ceEEEEEcCCCCCHHHHHHHHHHhC--CcEe-eeecccccCcccccCCccccccCCCcccc-cCCc-eEEEEEcCCCC--
Confidence 3778888884 355677777775 7888 999999985433222211 11112332 2322 24444433211
Q ss_pred CCCCCCCCCcccccCCCCCeEEEEEee---cccee-------------ccccCCEEEEeeccCCCCEEEEEeecCceeec
Q 007532 380 GLTSSDPQPVDLVDVEMGKEYELVITT---YAGLY-------------RYRVGDILRVIGFHNSAPQFHFVRRKNVLLSI 443 (599)
Q Consensus 380 ~~~~~~~~~l~~~ev~~G~~YelviTt---~~GLy-------------RYr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~ 443 (599)
. ...++.+|+.|||+|+. ..|++ -|+|||++++.. ...+.|+||.+|++++
T Consensus 407 -------~--~~~~~~~g~~Gel~v~gp~v~~GY~~~~~~~~~~~~~gw~~TGDlg~~d~----dG~l~i~GR~~d~i~~ 473 (632)
T PRK07529 407 -------R--YLRDCAVDEVGVLCIAGPNVFSGYLEAAHNKGLWLEDGWLNTGDLGRIDA----DGYFWLTGRAKDLIIR 473 (632)
T ss_pred -------c--ccccCCCCCceEEEEECCCccccccCCccccccccCCCceEcCcEEEEcC----CceEEEEecccCEEEe
Confidence 0 01356789999999975 34543 289999999973 5689999999999999
Q ss_pred cccccCHHHHHHHHHH
Q 007532 444 ESDKTDEAELQNAIDN 459 (599)
Q Consensus 444 ~GEk~~e~~v~~av~~ 459 (599)
+|+++++.+|+++|.+
T Consensus 474 ~G~~i~p~eIE~~l~~ 489 (632)
T PRK07529 474 GGHNIDPAAIEEALLR 489 (632)
T ss_pred CCEEECHHHHHHHHHh
Confidence 9999999999999965
No 16
>PRK07788 acyl-CoA synthetase; Validated
Probab=99.33 E-value=3.6e-10 Score=127.01 Aligned_cols=151 Identities=13% Similarity=0.082 Sum_probs=95.8
Q ss_pred CHHHHHHHHHHhccccccccccccCCCCceeEEEEecch---hhhHHHHHHHhCCCCCccccccccccccccccCCCC--
Q 007532 277 NTELAEFIRMECSKENWERIITRIWPNTKYLDVIVTGAM---AQYIPTLDYYSGGKLPMACTMYASSECYFGLNLNPI-- 351 (599)
Q Consensus 277 ~p~~A~~L~~~~~~~~~~g~~~~lWP~l~~l~~~~~g~~---~~y~~~l~~~~g~~~~~~~~~Y~asEg~i~i~~~~~-- 351 (599)
.|..+..|.+...+. . -..-.++ ++.+++||. ...++++++.++ ++++ +.||+||+.+.....+.
T Consensus 302 ~P~~~~~l~~~~~~~-~---~~~~~~~---lr~i~~gG~~l~~~~~~~~~~~~~--~~l~-~~YG~TE~~~~~~~~~~~~ 371 (549)
T PRK07788 302 VPVMLSRILDLGPEV-L---AKYDTSS---LKIIFVSGSALSPELATRALEAFG--PVLY-NLYGSTEVAFATIATPEDL 371 (549)
T ss_pred HHHHHHHHHhCcccc-c---CCCCCCc---eeEEEEeCCCCCHHHHHHHHHHhC--ccce-eccCcchhchhhccChhhh
Confidence 677676665443321 0 0011234 778888874 355677777776 5777 89999997432111111
Q ss_pred -CCCCCCceeeecCceEEEEeeCCCCCCCCCCCCCCCCcccccCCCCCeEEEEEeec---cceec----------cccCC
Q 007532 352 -CRPSEVSYTIMPNMAYFEFLPQEPSDSFGLTSSDPQPVDLVDVEMGKEYELVITTY---AGLYR----------YRVGD 417 (599)
Q Consensus 352 -~~~~~~~~~l~~~~~ffEFip~~~~~~~~~~~~~~~~l~~~ev~~G~~YelviTt~---~GLyR----------Yr~GD 417 (599)
..+...+. ..++. -++.++++. .++..|+.|||+|++. .|++. |+|||
T Consensus 372 ~~~~~~vG~-~~~~~-~~~i~d~~~----------------~~~~~g~~Gel~v~g~~~~~gY~~~~~~~~~~g~~~TGD 433 (549)
T PRK07788 372 AEAPGTVGR-PPKGV-TVKILDENG----------------NEVPRGVVGRIFVGNGFPFEGYTDGRDKQIIDGLLSSGD 433 (549)
T ss_pred hhcCCCccc-CCCCc-EEEEECCCc----------------CCCCCCCeEEEEEeCCCccccccCCCcccccCCceecCc
Confidence 00111121 12222 344554321 1356799999999864 44442 78999
Q ss_pred EEEEeeccCCCCEEEEEeecCceeeccccccCHHHHHHHHHH
Q 007532 418 ILRVIGFHNSAPQFHFVRRKNVLLSIESDKTDEAELQNAIDN 459 (599)
Q Consensus 418 vV~v~gf~~~~P~i~f~gR~~~~l~~~GEk~~e~~v~~av~~ 459 (599)
++++.. ...+.|+||.+|+++++|+++++.+|+++|.+
T Consensus 434 l~~~~~----~g~l~~~GR~dd~i~~~G~~v~p~eIE~~l~~ 471 (549)
T PRK07788 434 VGYFDE----DGLLFVDGRDDDMIVSGGENVFPAEVEDLLAG 471 (549)
T ss_pred eEEEcC----CCCEEEeccCcceEEECCEEECHHHHHHHHHh
Confidence 998873 46899999999999999999999999999965
No 17
>PRK06060 acyl-CoA synthetase; Validated
Probab=99.32 E-value=1.2e-10 Score=135.32 Aligned_cols=148 Identities=16% Similarity=0.180 Sum_probs=97.2
Q ss_pred CHHHHHHHHHHhccccccccccccCCCCceeEEEEecch---hhhHHHHHHHhCCCCCccccccccccccccccCCCC--
Q 007532 277 NTELAEFIRMECSKENWERIITRIWPNTKYLDVIVTGAM---AQYIPTLDYYSGGKLPMACTMYASSECYFGLNLNPI-- 351 (599)
Q Consensus 277 ~p~~A~~L~~~~~~~~~~g~~~~lWP~l~~l~~~~~g~~---~~y~~~l~~~~g~~~~~~~~~Y~asEg~i~i~~~~~-- 351 (599)
.|..+..|...+.. .-++. ++++++||. ...++++.+.+++ ++++ +.||+||+.........
T Consensus 243 ~P~~l~~l~~~~~~--------~~~~s---lr~i~~gGe~l~~~~~~~~~~~~~~-~~~~-~~YG~tE~~~~~~~~~~~~ 309 (705)
T PRK06060 243 VPNFFARVIDSCSP--------DSFRS---LRCVVSAGEALELGLAERLMEFFGG-IPIL-DGIGSTEVGQTFVSNRVDE 309 (705)
T ss_pred HHHHHHHHHHhccc--------ccccc---eeEEEEecCcCCHHHHHHHHHHcCC-CceE-eeeeccccCceEEeccCCC
Confidence 66666665543321 11234 778888874 3456777777876 8888 99999998432111110
Q ss_pred CCCCCCceeeecCceEEEEeeCCCCCCCCCCCCCCCCcccccCCCCCeEEEEEee---ccceec-----------cccCC
Q 007532 352 CRPSEVSYTIMPNMAYFEFLPQEPSDSFGLTSSDPQPVDLVDVEMGKEYELVITT---YAGLYR-----------YRVGD 417 (599)
Q Consensus 352 ~~~~~~~~~l~~~~~ffEFip~~~~~~~~~~~~~~~~l~~~ev~~G~~YelviTt---~~GLyR-----------Yr~GD 417 (599)
..+...+. ..++. .++.++++. .++.+|+.|||+|+. ..|+|. |+|||
T Consensus 310 ~~~~~iG~-p~~~~-~v~i~d~~g----------------~~~~~g~~GEl~i~g~~v~~GY~~~~~~~~~~~~~~~TGD 371 (705)
T PRK06060 310 WRLGTLGR-VLPPY-EIRVVAPDG----------------TTAGPGVEGDLWVRGPAIAKGYWNRPDSPVANEGWLDTRD 371 (705)
T ss_pred CCcCcccc-cCCCc-EEEEECCCC----------------CCCCCCCceEEEEccchhhhhhhCCCcccccCCCcEECCe
Confidence 00111122 22332 344444321 135689999999975 345554 99999
Q ss_pred EEEEeeccCCCCEEEEEeecCceeeccccccCHHHHHHHHHH
Q 007532 418 ILRVIGFHNSAPQFHFVRRKNVLLSIESDKTDEAELQNAIDN 459 (599)
Q Consensus 418 vV~v~gf~~~~P~i~f~gR~~~~l~~~GEk~~e~~v~~av~~ 459 (599)
++++.. ...+.|+||.+++++++|+++++.+|+.+|.+
T Consensus 372 l~~~~~----dG~l~~~GR~dd~ik~~G~~v~~~eIE~~l~~ 409 (705)
T PRK06060 372 RVCIDS----DGWVTYRCRADDTEVIGGVNVDPREVERLIIE 409 (705)
T ss_pred eEEECC----CceEEEecccCceEEECCEEECHHHHHHHHHh
Confidence 999873 45799999999999999999999999999976
No 18
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=99.31 E-value=8.6e-10 Score=126.26 Aligned_cols=131 Identities=12% Similarity=0.123 Sum_probs=86.2
Q ss_pred ceeEEEEecch---hhhHHHHHHHhCCCCCccccccccccccccc-cCCCCC-----CCCCCceeeecCceEEEEeeCCC
Q 007532 305 KYLDVIVTGAM---AQYIPTLDYYSGGKLPMACTMYASSECYFGL-NLNPIC-----RPSEVSYTIMPNMAYFEFLPQEP 375 (599)
Q Consensus 305 ~~l~~~~~g~~---~~y~~~l~~~~g~~~~~~~~~Y~asEg~i~i-~~~~~~-----~~~~~~~~l~~~~~ffEFip~~~ 375 (599)
..++.+++||. ....+.+++.++ ++++ +.||.||+...+ ...+.. .+...+. ..|+.. ++.+++++
T Consensus 355 ~~lr~i~~~Ge~l~~~~~~~~~~~~~--~~v~-~~YG~TE~~~~~~~~~~~~~~~~~~~~~~G~-p~~g~~-~~i~d~~~ 429 (629)
T PRK10524 355 SSLRALFLAGEPLDEPTASWISEALG--VPVI-DNYWQTETGWPILAIARGVEDRPTRLGSPGV-PMYGYN-VKLLNEVT 429 (629)
T ss_pred hheeEEEEeCCCCCHHHHHHHHHhcC--CCeE-eccccccccchhhcCCCCcccCcCCCCCccc-CcCCce-EEEEeCCC
Confidence 34788888884 344566677775 7888 999999984211 111110 0111121 122221 34444321
Q ss_pred CCCCCCCCCCCCCcccccCCCCCeEEEEEeec------ccee-----------------ccccCCEEEEeeccCCCCEEE
Q 007532 376 SDSFGLTSSDPQPVDLVDVEMGKEYELVITTY------AGLY-----------------RYRVGDILRVIGFHNSAPQFH 432 (599)
Q Consensus 376 ~~~~~~~~~~~~~l~~~ev~~G~~YelviTt~------~GLy-----------------RYr~GDvV~v~gf~~~~P~i~ 432 (599)
. .++.+|+.|||+|+.. .|+| -|+|||++++. ....+.
T Consensus 430 g---------------~~~~~g~~Gel~i~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGDl~~~d----~dG~l~ 490 (629)
T PRK10524 430 G---------------EPCGPNEKGVLVIEGPLPPGCMQTVWGDDDRFVKTYWSLFGRQVYSTFDWGIRD----ADGYYF 490 (629)
T ss_pred C---------------CCCCCCCcEEEEEcCCCChhhcCCccCChHHHHHhhhccCCCcEEEcCCcEEEc----CCCcEE
Confidence 1 2357899999999753 2222 28999999986 346899
Q ss_pred EEeecCceeeccccccCHHHHHHHHHH
Q 007532 433 FVRRKNVLLSIESDKTDEAELQNAIDN 459 (599)
Q Consensus 433 f~gR~~~~l~~~GEk~~e~~v~~av~~ 459 (599)
|+||.+|++++.|+++.+.+|+++|.+
T Consensus 491 i~GR~dd~i~~~G~ri~p~eIE~~l~~ 517 (629)
T PRK10524 491 ILGRTDDVINVAGHRLGTREIEESISS 517 (629)
T ss_pred EEEEecCeEEeCCEEeCHHHHHHHHHh
Confidence 999999999999999999999999965
No 19
>PRK09274 peptide synthase; Provisional
Probab=99.30 E-value=1.4e-10 Score=130.29 Aligned_cols=160 Identities=13% Similarity=0.093 Sum_probs=99.2
Q ss_pred CHHHHHHHHHHhccccccccccccCCCCceeEEEEecch---hhhHHHHHHHhCCCCCccccccccccccccccCCCCC-
Q 007532 277 NTELAEFIRMECSKENWERIITRIWPNTKYLDVIVTGAM---AQYIPTLDYYSGGKLPMACTMYASSECYFGLNLNPIC- 352 (599)
Q Consensus 277 ~p~~A~~L~~~~~~~~~~g~~~~lWP~l~~l~~~~~g~~---~~y~~~l~~~~g~~~~~~~~~Y~asEg~i~i~~~~~~- 352 (599)
.|..+..|.+.....+ .-.|+ ++.+++||. ...++++++.++.+++++ +.||+||+..........
T Consensus 269 ~P~~~~~l~~~~~~~~------~~~~~---lr~~~~gG~~~~~~~~~~~~~~~~~~~~~~-~~YG~TE~~~~~~~~~~~~ 338 (552)
T PRK09274 269 SPALLERLGRYGEANG------IKLPS---LRRVISAGAPVPIAVIERFRAMLPPDAEIL-TPYGATEALPISSIESREI 338 (552)
T ss_pred cHHHHHHHHHHhhhcC------CCCch---hhEEEecCCcCCHHHHHHHHHHcCCCceEE-ccccccccceeEeecchhh
Confidence 6777777665543221 12344 667778874 456677888775227888 999999984211111000
Q ss_pred --------CCC---CCceeeecCceEEEEeeCCCCCCCCCCCCCCCCcccccCCCCCeEEEEEeec---cce--------
Q 007532 353 --------RPS---EVSYTIMPNMAYFEFLPQEPSDSFGLTSSDPQPVDLVDVEMGKEYELVITTY---AGL-------- 410 (599)
Q Consensus 353 --------~~~---~~~~~l~~~~~ffEFip~~~~~~~~~~~~~~~~l~~~ev~~G~~YelviTt~---~GL-------- 410 (599)
... ..+. .+|+. -+..+++.+.. .+..=...++..|+.|||+|+.. .|+
T Consensus 339 ~~~~~~~~~~~~~~~vG~-~~~~~-~~~ivd~~~~~-------~~~~~~~~~~~~g~~Gel~v~g~~~~~GY~~~~~~t~ 409 (552)
T PRK09274 339 LFATRAATDNGAGICVGR-PVDGV-EVRIIAISDAP-------IPEWDDALRLATGEIGEIVVAGPMVTRSYYNRPEATR 409 (552)
T ss_pred hccccccccCCCCcccCc-cCCCc-eEEEEeccccc-------cccccccccCCCCCeeEEEEecCcccccccCChHHhh
Confidence 000 0111 22322 23445432210 00000234578999999999641 222
Q ss_pred ----------eccccCCEEEEeeccCCCCEEEEEeecCceeeccccccCHHHHHHHHHH
Q 007532 411 ----------YRYRVGDILRVIGFHNSAPQFHFVRRKNVLLSIESDKTDEAELQNAIDN 459 (599)
Q Consensus 411 ----------yRYr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~GEk~~e~~v~~av~~ 459 (599)
..|+|||++++.. ...+.|+||.++++++.|+++++.+|+++|.+
T Consensus 410 ~~~~~~~~g~~w~~TGDlg~~d~----dG~l~~~GR~~d~i~~~G~~v~p~eIE~~l~~ 464 (552)
T PRK09274 410 LAKIPDGQGDVWHRMGDLGYLDA----QGRLWFCGRKAHRVETAGGTLYTIPCERIFNT 464 (552)
T ss_pred hhhcccCCCCcEEEcCCEEEEcc----CCcEEEEeccCCeEEECCEEECcHHHHHHHHh
Confidence 3799999999873 46899999999999999999999999999976
No 20
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.30 E-value=3.1e-10 Score=128.09 Aligned_cols=128 Identities=16% Similarity=0.295 Sum_probs=88.1
Q ss_pred eEEEEecch---hhhHHHHHHHhCCCCCccccccccccccccccCCCCC--CCCCCceeeecCceEEEEeeCCCCCCCCC
Q 007532 307 LDVIVTGAM---AQYIPTLDYYSGGKLPMACTMYASSECYFGLNLNPIC--RPSEVSYTIMPNMAYFEFLPQEPSDSFGL 381 (599)
Q Consensus 307 l~~~~~g~~---~~y~~~l~~~~g~~~~~~~~~Y~asEg~i~i~~~~~~--~~~~~~~~l~~~~~ffEFip~~~~~~~~~ 381 (599)
+++++.||. ...++.+++.++ ++++ +.||+||+...+...+.. .+...+. ..|+ ...+.++++.
T Consensus 328 lr~v~~gG~~~~~~~~~~~~~~~~--~~v~-~~YG~tE~~~~~~~~~~~~~~~~~vG~-~~~~-~~v~i~d~~~------ 396 (562)
T PRK05677 328 LKLTLSGGMALQLATAERWKEVTG--CAIC-EGYGMTETSPVVSVNPSQAIQVGTIGI-PVPS-TLCKVIDDDG------ 396 (562)
T ss_pred ceEEEEcCccCCHHHHHHHHHHcC--CCee-ccCCccccCcceeecCccCCCCCccCc-cCCC-CEEEEECCCC------
Confidence 778888884 345566777665 7888 999999984322211111 1112232 2232 2455554321
Q ss_pred CCCCCCCcccccCCCCCeEEEEEee---ccceec--------------cccCCEEEEeeccCCCCEEEEEeecCceeecc
Q 007532 382 TSSDPQPVDLVDVEMGKEYELVITT---YAGLYR--------------YRVGDILRVIGFHNSAPQFHFVRRKNVLLSIE 444 (599)
Q Consensus 382 ~~~~~~~l~~~ev~~G~~YelviTt---~~GLyR--------------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~ 444 (599)
.+|..|+.|||+|++ ..|+|. |+|||+++++. ...+.|.||.+|++++.
T Consensus 397 ----------~~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~~~~~g~~~TGDlg~~~~----~G~l~i~GR~~d~i~~~ 462 (562)
T PRK05677 397 ----------NELPLGEVGELCVKGPQVMKGYWQRPEATDEILDSDGWLKTGDIALIQE----DGYMRIVDRKKDMILVS 462 (562)
T ss_pred ----------CCCCCCCCeEEEEecCccchhhcCCchhhhhccCCCCcccccceEEECC----CCcEEEEecCcCeEEeC
Confidence 245789999999975 345542 89999999984 45789999999999999
Q ss_pred ccccCHHHHHHHHHH
Q 007532 445 SDKTDEAELQNAIDN 459 (599)
Q Consensus 445 GEk~~e~~v~~av~~ 459 (599)
|+++++.+|+++|.+
T Consensus 463 G~~i~p~eiE~~l~~ 477 (562)
T PRK05677 463 GFNVYPNELEDVLAA 477 (562)
T ss_pred CEEECHHHHHHHHHh
Confidence 999999999999965
No 21
>PLN02574 4-coumarate--CoA ligase-like
Probab=99.30 E-value=8.3e-10 Score=124.64 Aligned_cols=131 Identities=18% Similarity=0.172 Sum_probs=88.1
Q ss_pred eEEEEecch---hhhHHHHHHHhCCCCCccccccccccccc-cc-cCCCCCCCCCCcee-eecCceEEEEeeCCCCCCCC
Q 007532 307 LDVIVTGAM---AQYIPTLDYYSGGKLPMACTMYASSECYF-GL-NLNPICRPSEVSYT-IMPNMAYFEFLPQEPSDSFG 380 (599)
Q Consensus 307 l~~~~~g~~---~~y~~~l~~~~g~~~~~~~~~Y~asEg~i-~i-~~~~~~~~~~~~~~-l~~~~~ffEFip~~~~~~~~ 380 (599)
++.+.+||. ...++++.+.+++ ++++ +.||+||+.. .. .............. ..|+ .-.+.+++++.
T Consensus 321 lr~~~~gg~~l~~~~~~~~~~~~~~-~~v~-~~YG~tE~~~~~~~~~~~~~~~~~~~vG~~~~~-~~v~i~d~~~g---- 393 (560)
T PLN02574 321 LKQVSCGAAPLSGKFIQDFVQTLPH-VDFI-QGYGMTESTAVGTRGFNTEKLSKYSSVGLLAPN-MQAKVVDWSTG---- 393 (560)
T ss_pred ceEEEEecccCCHHHHHHHHHHCCC-CcEE-ecccccccCceeecCCCccccCCCCceeeeCCC-cEEEEEeCCCC----
Confidence 667777774 3455667777766 8888 8999999742 21 11111100011121 2222 33455554332
Q ss_pred CCCCCCCCcccccCCCCCeEEEEEee---ccceec--------------cccCCEEEEeeccCCCCEEEEEeecCceeec
Q 007532 381 LTSSDPQPVDLVDVEMGKEYELVITT---YAGLYR--------------YRVGDILRVIGFHNSAPQFHFVRRKNVLLSI 443 (599)
Q Consensus 381 ~~~~~~~~l~~~ev~~G~~YelviTt---~~GLyR--------------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~ 443 (599)
.++.+|+.|||+|+. ..|+|. |+|||++++.. ...+.|+||.+|++++
T Consensus 394 -----------~~~~~g~~Gei~v~g~~~~~GY~~~~~~t~~~~~~~g~~~TGDlg~~~~----~G~l~i~GR~~d~i~~ 458 (560)
T PLN02574 394 -----------CLLPPGNCGELWIQGPGVMKGYLNNPKATQSTIDKDGWLRTGDIAYFDE----DGYLYIVDRLKEIIKY 458 (560)
T ss_pred -----------cCCCCCCCeEEEEECcchhhhhcCChhHhhhhccCCCCcccceEEEEEC----CCeEEEEecchhheEE
Confidence 245789999999985 245542 89999999973 4689999999999999
Q ss_pred cccccCHHHHHHHHHH
Q 007532 444 ESDKTDEAELQNAIDN 459 (599)
Q Consensus 444 ~GEk~~e~~v~~av~~ 459 (599)
.|+++++.+|+.+|..
T Consensus 459 ~G~~v~~~eiE~~l~~ 474 (560)
T PLN02574 459 KGFQIAPADLEAVLIS 474 (560)
T ss_pred CCEEECHHHHHHHHHh
Confidence 9999999999999965
No 22
>PLN02654 acetate-CoA ligase
Probab=99.30 E-value=3.8e-09 Score=122.10 Aligned_cols=250 Identities=13% Similarity=0.120 Sum_probs=134.0
Q ss_pred CHHHHHHHHHHhccccccccccccCCCCceeEEEEecch---hhhHHHHHHHhC-CCCCcccccccccccccc-ccCCCC
Q 007532 277 NTELAEFIRMECSKENWERIITRIWPNTKYLDVIVTGAM---AQYIPTLDYYSG-GKLPMACTMYASSECYFG-LNLNPI 351 (599)
Q Consensus 277 ~p~~A~~L~~~~~~~~~~g~~~~lWP~l~~l~~~~~g~~---~~y~~~l~~~~g-~~~~~~~~~Y~asEg~i~-i~~~~~ 351 (599)
.|..++.|.+...+. .... +++.++.+.+||. ....+.+.+.+| .++++. +.||.||+... +...+.
T Consensus 376 ~P~~~~~l~~~~~~~-----~~~~--~l~~Lr~i~~~Ge~l~~~~~~~~~~~~g~~~~~i~-~~yg~TE~g~~~~~~~~~ 447 (666)
T PLN02654 376 APTLVRSLMRDGDEY-----VTRH--SRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPIS-DTWWQTETGGFMITPLPG 447 (666)
T ss_pred CHHHHHHHHhhCccc-----cccC--ChhheeEEEEecCCCCHHHHHHHHHHhCCCCCcee-ccccccccCCeeeccCCC
Confidence 666666665433211 1111 3344778888874 233455666665 236777 99999997321 110110
Q ss_pred C---CCCCCceeeecCceEEEEeeCCCCCCCCCCCCCCCCcccccCCCCCeEEEEEee-----ccceec-----------
Q 007532 352 C---RPSEVSYTIMPNMAYFEFLPQEPSDSFGLTSSDPQPVDLVDVEMGKEYELVITT-----YAGLYR----------- 412 (599)
Q Consensus 352 ~---~~~~~~~~l~~~~~ffEFip~~~~~~~~~~~~~~~~l~~~ev~~G~~YelviTt-----~~GLyR----------- 412 (599)
+ .++..+.. .|+.. ...++.+ ..++..|+.|||+|+. ..|+|+
T Consensus 448 ~~~~~~gs~G~p-~~g~~-v~i~d~~----------------g~~~~~~~~Gel~v~~~~p~~~~gy~~~~~~~~~~~~~ 509 (666)
T PLN02654 448 AWPQKPGSATFP-FFGVQ-PVIVDEK----------------GKEIEGECSGYLCVKKSWPGAFRTLYGDHERYETTYFK 509 (666)
T ss_pred CCCCCCCccCCC-CCCce-EEEECCC----------------CCCCCCCCceEEEEcCCCchhhhhhcCChHHHHHhhhh
Confidence 0 01111221 22211 1122211 1245677889999975 234442
Q ss_pred -----cccCCEEEEeeccCCCCEEEEEeecCceeeccccccCHHHHHHHHHHHHHHhhhcCCeEEeeEEee-cCCCCCce
Q 007532 413 -----YRVGDILRVIGFHNSAPQFHFVRRKNVLLSIESDKTDEAELQNAIDNASRLLREFNTSVGEYTSYA-NTKTIPGH 486 (599)
Q Consensus 413 -----Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~GEk~~e~~v~~av~~a~~~l~~~g~~l~~f~~~~-~~~~~p~h 486 (599)
|+|||+++++. ...+.|+||.+|+|++.|+++++.+|+++|.+. .+ |.+-+|+. +.....-.
T Consensus 510 ~~~g~~~TGD~~~~d~----dG~l~i~GR~dd~I~~~G~ri~p~EIE~~l~~~------p~--V~eaaVvg~~d~~~ge~ 577 (666)
T PLN02654 510 PFAGYYFSGDGCSRDK----DGYYWLTGRVDDVINVSGHRIGTAEVESALVSH------PQ--CAEAAVVGIEHEVKGQG 577 (666)
T ss_pred cCCCEEEeCceEEECC----CCcEEEeeeccCeEEeCCEEECHHHHHHHHHhC------CC--eeeEEEEeeEcCCCCeE
Confidence 89999999973 468999999999999999999999999999753 12 33444432 11111113
Q ss_pred EEEEEEEeecCCCCCCChHHHHHHHHHHHHHhChhhHhccccCCcc-CCeEEEEeC------CccHHHHHHHHHhcCCCC
Q 007532 487 YVIYWELLIKDSANSPTNEVLNQCCLAMEECLNSVYRQGRVADNSI-GPLEIRVVR------NGTFEELMDYAISRGASI 559 (599)
Q Consensus 487 Y~l~~E~e~~~~~~~~~~~~l~~~~~~ld~~LN~~Y~~~R~~~g~l-~p~~v~iv~------~gtF~~~~~~~~~~G~~~ 559 (599)
-+.|+.+.. + ...+.+..+++.+.+.+.| +.. -|-.|.+|+ .|-..+-.=..+..|..
T Consensus 578 ~~a~Vvl~~-~--~~~~~~l~~~l~~~~~~~L-----------~~~~~P~~i~~v~~lP~T~sGKi~r~~l~~~~~~~~- 642 (666)
T PLN02654 578 IYAFVTLVE-G--VPYSEELRKSLILTVRNQI-----------GAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASRQL- 642 (666)
T ss_pred EEEEEEECC-C--CCCCHHHHHHHHHHHHHhC-----------CCCcCCCEEEECCCCCCCCCcCchHHHHHHHHcCCC-
Confidence 345666642 2 1223333333334444444 122 244555552 34333221111223432
Q ss_pred CCCCCCcccCCHhHHHHHhc
Q 007532 560 NQYKVPRCVNFTPIVELLDS 579 (599)
Q Consensus 560 ~Q~K~Pr~~~~~~~~~~L~~ 579 (599)
.+.+.+-.+.|++.++.+.+
T Consensus 643 ~~~~~~~~~~~~~~~~~~~~ 662 (666)
T PLN02654 643 DELGDTSTLADPGVVDQLIA 662 (666)
T ss_pred CCCCCcccccCHHHHHHHHH
Confidence 26777888899999988764
No 23
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=99.29 E-value=1.1e-09 Score=123.79 Aligned_cols=152 Identities=13% Similarity=0.111 Sum_probs=96.3
Q ss_pred CHHHHHHHHHHhccccccccccccCCCCceeEEEEecch---hhhHHHHHHHhCCCCCccccccccccccc-cccCCC--
Q 007532 277 NTELAEFIRMECSKENWERIITRIWPNTKYLDVIVTGAM---AQYIPTLDYYSGGKLPMACTMYASSECYF-GLNLNP-- 350 (599)
Q Consensus 277 ~p~~A~~L~~~~~~~~~~g~~~~lWP~l~~l~~~~~g~~---~~y~~~l~~~~g~~~~~~~~~Y~asEg~i-~i~~~~-- 350 (599)
.|...+.|.+..... . ...-++. ++.+++||. ......+++.+| ++++ +.||+||+.. .....+
T Consensus 302 ~P~~~~~l~~~~~~~-~---~~~~~~~---lr~~~~gG~~l~~~~~~~~~~~~g--~~i~-~~YG~tE~~~~~~~~~~~~ 371 (570)
T PRK04319 302 APTAIRMLMGAGDDL-V---KKYDLSS---LRHILSVGEPLNPEVVRWGMKVFG--LPIH-DNWWMTETGGIMIANYPAM 371 (570)
T ss_pred CHHHHHHHHhcCCcc-c---ccCCccc---ceEEEEcccCCCHHHHHHHHHHhC--CCeE-eceeecccCCEEEecCCCC
Confidence 666666665433211 0 0111334 777788874 345566677676 6888 9999999742 221111
Q ss_pred CCCCCCCceeeecCceEEEEeeCCCCCCCCCCCCCCCCcccccCCCCCeEEEEEee-----cccee-------------c
Q 007532 351 ICRPSEVSYTIMPNMAYFEFLPQEPSDSFGLTSSDPQPVDLVDVEMGKEYELVITT-----YAGLY-------------R 412 (599)
Q Consensus 351 ~~~~~~~~~~l~~~~~ffEFip~~~~~~~~~~~~~~~~l~~~ev~~G~~YelviTt-----~~GLy-------------R 412 (599)
...++..+. ..|+ ...+.++.+. .++++|+.|||+|+. ..|+| -
T Consensus 372 ~~~~~~~G~-p~~g-~~~~i~d~~~----------------~~~~~g~~Gel~i~~~~~~~~~GY~~~~~~~~~~~~~gw 433 (570)
T PRK04319 372 DIKPGSMGK-PLPG-IEAAIVDDQG----------------NELPPNRMGNLAIKKGWPSMMRGIWNNPEKYESYFAGDW 433 (570)
T ss_pred CCCCCcCcC-CCCC-CEEEEECCCC----------------CCCCCCCceEEEEcCCCChHHhHhcCCHHHhhhhhcCCc
Confidence 111112222 1222 2345554322 135789999999974 23555 2
Q ss_pred cccCCEEEEeeccCCCCEEEEEeecCceeeccccccCHHHHHHHHHHH
Q 007532 413 YRVGDILRVIGFHNSAPQFHFVRRKNVLLSIESDKTDEAELQNAIDNA 460 (599)
Q Consensus 413 Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~GEk~~e~~v~~av~~a 460 (599)
|+|||++++.. ...+.|+||.++++++.|+++++.+||+++.+.
T Consensus 434 ~~TGDl~~~~~----~g~l~~~GR~~d~i~~~G~~i~p~eIE~~l~~~ 477 (570)
T PRK04319 434 YVSGDSAYMDE----DGYFWFQGRVDDVIKTSGERVGPFEVESKLMEH 477 (570)
T ss_pred eEeCcEEEECC----CeeEEEEecCCCEEEECCEEECHHHHHHHHhhC
Confidence 89999999973 458899999999999999999999999999763
No 24
>PRK07514 malonyl-CoA synthase; Validated
Probab=99.29 E-value=3.3e-10 Score=125.41 Aligned_cols=129 Identities=16% Similarity=0.282 Sum_probs=88.3
Q ss_pred eEEEEecch---hhhHHHHHHHhCCCCCccccccccccccccccC--CCCCCCCCCceeeecCceEEEEeeCCCCCCCCC
Q 007532 307 LDVIVTGAM---AQYIPTLDYYSGGKLPMACTMYASSECYFGLNL--NPICRPSEVSYTIMPNMAYFEFLPQEPSDSFGL 381 (599)
Q Consensus 307 l~~~~~g~~---~~y~~~l~~~~g~~~~~~~~~Y~asEg~i~i~~--~~~~~~~~~~~~l~~~~~ffEFip~~~~~~~~~ 381 (599)
++++++||. ....+.+++.++ ++++ +.||+||+.+.... ...+.+...+. ..++ .....+++++.
T Consensus 271 lr~~~~gg~~~~~~~~~~~~~~~~--~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~G~-~~~~-~~v~i~d~~~~----- 340 (504)
T PRK07514 271 MRLFISGSAPLLAETHREFQERTG--HAIL-ERYGMTETNMNTSNPYDGERRAGTVGF-PLPG-VSLRVTDPETG----- 340 (504)
T ss_pred eeeEEecCCCCCHHHHHHHHHHhC--Ccce-eecccccccccccCCccccccCccccc-CCCC-cEEEEEECCCC-----
Confidence 778888874 244566666665 6788 89999998432211 11111111121 2222 34555653322
Q ss_pred CCCCCCCcccccCCCCCeEEEEEee---ccceec--------------cccCCEEEEeeccCCCCEEEEEeecCceeecc
Q 007532 382 TSSDPQPVDLVDVEMGKEYELVITT---YAGLYR--------------YRVGDILRVIGFHNSAPQFHFVRRKNVLLSIE 444 (599)
Q Consensus 382 ~~~~~~~l~~~ev~~G~~YelviTt---~~GLyR--------------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~ 444 (599)
..+..|+.+||+|++ ..|+|+ |+|||++++.. ...+.|+||.++++++.
T Consensus 341 ----------~~~~~g~~Gel~i~~~~~~~gy~~~~~~~~~~~~~~~~~~TGDl~~~~~----~g~~~~~GR~~~~i~~~ 406 (504)
T PRK07514 341 ----------AELPPGEIGMIEVKGPNVFKGYWRMPEKTAEEFRADGFFITGDLGKIDE----RGYVHIVGRGKDLIISG 406 (504)
T ss_pred ----------CCCCCCCceEEEEecCCccccccCCchhhhhhcccCCCeeecceEEEcC----CccEEEeccccceEEeC
Confidence 135789999999986 456664 99999999874 45789999999999999
Q ss_pred ccccCHHHHHHHHHH
Q 007532 445 SDKTDEAELQNAIDN 459 (599)
Q Consensus 445 GEk~~e~~v~~av~~ 459 (599)
|+++++.+|+++|.+
T Consensus 407 G~~i~~~~IE~~l~~ 421 (504)
T PRK07514 407 GYNVYPKEVEGEIDE 421 (504)
T ss_pred CeEECHHHHHHHHHh
Confidence 999999999999965
No 25
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.28 E-value=1.2e-09 Score=120.85 Aligned_cols=149 Identities=12% Similarity=0.164 Sum_probs=96.3
Q ss_pred CHHHHHHHHHHhccccccccccccCCCCceeEEEEecch---hhhHHHHHHHhCCCCCcccccccccccc-ccccCCCCC
Q 007532 277 NTELAEFIRMECSKENWERIITRIWPNTKYLDVIVTGAM---AQYIPTLDYYSGGKLPMACTMYASSECY-FGLNLNPIC 352 (599)
Q Consensus 277 ~p~~A~~L~~~~~~~~~~g~~~~lWP~l~~l~~~~~g~~---~~y~~~l~~~~g~~~~~~~~~Y~asEg~-i~i~~~~~~ 352 (599)
.|..+..|.....+. ...+++ ++.+..||. ...++.+.+.++ ++++ +.||+||.. ++.......
T Consensus 262 ~p~~~~~l~~~~~~~------~~~~~~---l~~v~~~Ge~l~~~~~~~~~~~~~--~~v~-~~YG~tE~~~~~~~~~~~~ 329 (521)
T PRK06187 262 VPTIWQMLLKAPRAY------FVDFSS---LRLVIYGGAALPPALLREFKEKFG--IDLV-QGYGMTETSPVVSVLPPED 329 (521)
T ss_pred hHHHHHHHHcCcCCC------ccCcch---hhEEEEcCcCCCHHHHHHHHHHhC--cchh-eeeccCccCcccccCCccc
Confidence 677777776655432 123445 566666663 355677777774 7888 899999973 222111000
Q ss_pred -------CCCCCceeeecCceEEEEeeCCCCCCCCCCCCCCCCcccccCCC--CCeEEEEEeec---ccee-c-------
Q 007532 353 -------RPSEVSYTIMPNMAYFEFLPQEPSDSFGLTSSDPQPVDLVDVEM--GKEYELVITTY---AGLY-R------- 412 (599)
Q Consensus 353 -------~~~~~~~~l~~~~~ffEFip~~~~~~~~~~~~~~~~l~~~ev~~--G~~YelviTt~---~GLy-R------- 412 (599)
.....+. ..|+ ..++.++++.. ++.. |+.|||++++. .|++ +
T Consensus 330 ~~~~~~~~~~~~G~-~~~~-~~~~i~~~~~~----------------~~~~~~g~~Gel~v~~~~~~~~y~~~~~~~~~~ 391 (521)
T PRK06187 330 QLPGQWTKRRSAGR-PLPG-VEARIVDDDGD----------------ELPPDGGEVGEIIVRGPWLMQGYWNRPEATAET 391 (521)
T ss_pred ccccccccCCcccc-ccCC-eEEEEECCCCC----------------CCCCCCCCeeEEEEECcchhhhhcCCHHHHHHH
Confidence 0111121 1222 23555554321 2345 99999999874 4444 3
Q ss_pred -----cccCCEEEEeeccCCCCEEEEEeecCceeeccccccCHHHHHHHHHH
Q 007532 413 -----YRVGDILRVIGFHNSAPQFHFVRRKNVLLSIESDKTDEAELQNAIDN 459 (599)
Q Consensus 413 -----Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~GEk~~e~~v~~av~~ 459 (599)
|+|||++++.. ...+.++||.+++++++|+++++.+|++++.+
T Consensus 392 ~~~~~~~tGD~~~~~~----~g~~~~~GR~~~~i~~~G~~v~~~~IE~~l~~ 439 (521)
T PRK06187 392 IDGGWLHTGDVGYIDE----DGYLYITDRIKDVIISGGENIYPRELEDALYG 439 (521)
T ss_pred hhCCceeccceEEEcC----CCCEEEeecccceEEcCCeEECHHHHHHHHHh
Confidence 99999999974 45789999999999999999999999998865
No 26
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=99.27 E-value=1.1e-09 Score=126.22 Aligned_cols=232 Identities=14% Similarity=0.087 Sum_probs=128.5
Q ss_pred CCceeEEEEecch---hhhHHHHHHHhCCCCCccccccccccccccccCC-CCCC--CCCCceeeecCceEEEEeeCCCC
Q 007532 303 NTKYLDVIVTGAM---AQYIPTLDYYSGGKLPMACTMYASSECYFGLNLN-PICR--PSEVSYTIMPNMAYFEFLPQEPS 376 (599)
Q Consensus 303 ~l~~l~~~~~g~~---~~y~~~l~~~~g~~~~~~~~~Y~asEg~i~i~~~-~~~~--~~~~~~~l~~~~~ffEFip~~~~ 376 (599)
++..++++.+||. ....+.+.+.++.+++++ ..||+||...++... +..+ ++..+. ..|+.. +..++.+
T Consensus 381 ~l~sLr~i~~~Ge~l~~~~~~~~~~~~~~~~~~~-~~yG~TE~~~~~~~~~~~~~~~~g~~g~-p~~g~~-~~ivd~~-- 455 (655)
T PRK03584 381 DLSALRTIGSTGSPLPPEGFDWVYEHVKADVWLA-SISGGTDICSCFVGGNPLLPVYRGEIQC-RGLGMA-VEAWDED-- 455 (655)
T ss_pred ChhheEEEEEecCCCCHHHHHHHHHHhCCCceEE-eccChHhhhcccccCCCCCCcCCCccCC-CcCCce-eEEECCC--
Confidence 3445888888884 244556666665448887 999999963222111 1000 011111 112211 2222221
Q ss_pred CCCCCCCCCCCCcccccCCCCCeEEEEEeec-----cceec------------------cccCCEEEEeeccCCCCEEEE
Q 007532 377 DSFGLTSSDPQPVDLVDVEMGKEYELVITTY-----AGLYR------------------YRVGDILRVIGFHNSAPQFHF 433 (599)
Q Consensus 377 ~~~~~~~~~~~~l~~~ev~~G~~YelviTt~-----~GLyR------------------Yr~GDvV~v~gf~~~~P~i~f 433 (599)
..++ +|+.|||+|+.. .|+|. |+|||++++.. ...+.|
T Consensus 456 --------------g~~~-~g~~GeL~v~gp~p~~~~gy~~~~~~~~~~~~~~~~~~g~~~TGDl~~~d~----dG~l~i 516 (655)
T PRK03584 456 --------------GRPV-VGEVGELVCTKPFPSMPLGFWNDPDGSRYRDAYFDTFPGVWRHGDWIEITE----HGGVVI 516 (655)
T ss_pred --------------CCCC-CCCceEEEEccCCCCCcceeeCCCccchHHHhhhccCCCEeecCCeEEECC----CCeEEE
Confidence 1134 688999999752 34442 78999999973 468999
Q ss_pred EeecCceeeccccccCHHHHHHHHHHHHHHhhhcCCeEEeeEEee-cCCCCCceEEEEEEEeecCCCCCCChHHHHHHHH
Q 007532 434 VRRKNVLLSIESDKTDEAELQNAIDNASRLLREFNTSVGEYTSYA-NTKTIPGHYVIYWELLIKDSANSPTNEVLNQCCL 512 (599)
Q Consensus 434 ~gR~~~~l~~~GEk~~e~~v~~av~~a~~~l~~~g~~l~~f~~~~-~~~~~p~hY~l~~E~e~~~~~~~~~~~~l~~~~~ 512 (599)
+||.+|++++.|+++.+.|||++|.+. .+ |.+-+|+. +.......-++|+++.. + ...+++..+++.+
T Consensus 517 ~GR~dd~Ik~~G~rI~p~EIE~~l~~~------p~--V~ea~vvg~~~~~~g~~~~a~vv~~~-~--~~~~~~~~~~l~~ 585 (655)
T PRK03584 517 YGRSDATLNRGGVRIGTAEIYRQVEAL------PE--VLDSLVIGQEWPDGDVRMPLFVVLAE-G--VTLDDALRARIRT 585 (655)
T ss_pred EeeccCeeecCcEEECHHHHHHHHHhC------CC--cceEEEEeeEcCCCCEEEEEEEEECC-C--CCCcHHHHHHHHH
Confidence 999999999999999999999999753 22 33444332 11112224456777652 2 1233333334444
Q ss_pred HHHHHhChhhHhccccCCccCCeEEEEeC------CccHHHHHHHHHhcCCCCCCCCCCcccCCHhHHHHHhc
Q 007532 513 AMEECLNSVYRQGRVADNSIGPLEIRVVR------NGTFEELMDYAISRGASINQYKVPRCVNFTPIVELLDS 579 (599)
Q Consensus 513 ~ld~~LN~~Y~~~R~~~g~l~p~~v~iv~------~gtF~~~~~~~~~~G~~~~Q~K~Pr~~~~~~~~~~L~~ 579 (599)
.+.+.|. .| .-|-.|.+|+ .|--.+..=+.+..|...+|...+.-+.|++.++.+.+
T Consensus 586 ~~~~~L~-~~---------~~P~~i~~v~~lP~t~sGKi~r~~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 648 (655)
T PRK03584 586 TIRTNLS-PR---------HVPDKIIAVPDIPRTLSGKKVELPVKKLLHGRPVKKAVNRDALANPEALDWFAD 648 (655)
T ss_pred HHHhhCC-CC---------cCCCEEEECCCCCCCCCccchHHHHHHHHcCCCCCCCCCcccccCHHHHHHHHH
Confidence 4444441 11 1244555543 33322211111224665555556777789999888754
No 27
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=99.27 E-value=2.2e-10 Score=128.83 Aligned_cols=128 Identities=9% Similarity=0.125 Sum_probs=86.7
Q ss_pred eEEEEecch---hhhHHHHHHHhCCCCCccccccccccccccccCCCCCC----CCCCceeeecCceEEEEeeCCCCCCC
Q 007532 307 LDVIVTGAM---AQYIPTLDYYSGGKLPMACTMYASSECYFGLNLNPICR----PSEVSYTIMPNMAYFEFLPQEPSDSF 379 (599)
Q Consensus 307 l~~~~~g~~---~~y~~~l~~~~g~~~~~~~~~Y~asEg~i~i~~~~~~~----~~~~~~~l~~~~~ffEFip~~~~~~~ 379 (599)
++++++||. ...++.+++.++ ++++ +.||+||+.......+..+ ....+. ..|+. -++.++++
T Consensus 314 l~~~~~~G~~l~~~~~~~~~~~~~--~~~~-~~YG~TE~~~~~~~~~~~~~~~~~~~~G~-~~~~~-~v~i~d~~----- 383 (547)
T PRK13295 314 LRTFLCAGAPIPGALVERARAALG--AKIV-SAWGMTENGAVTLTKLDDPDERASTTDGC-PLPGV-EVRVVDAD----- 383 (547)
T ss_pred ceEEEEecCCCCHHHHHHHHHHhC--CCeE-EeccCCCCCCeeeccCCCcchhccCcccc-ccCCc-EEEEECCC-----
Confidence 777777774 356677777774 7898 9999999843211111100 001112 11222 23444322
Q ss_pred CCCCCCCCCcccccCCCCCeEEEEEee---ccceec------------cccCCEEEEeeccCCCCEEEEEeecCceeecc
Q 007532 380 GLTSSDPQPVDLVDVEMGKEYELVITT---YAGLYR------------YRVGDILRVIGFHNSAPQFHFVRRKNVLLSIE 444 (599)
Q Consensus 380 ~~~~~~~~~l~~~ev~~G~~YelviTt---~~GLyR------------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~ 444 (599)
..++..|+.+||+|+. ..|+|. |+|||++++.. ...+.|+||.++++++.
T Consensus 384 -----------~~~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~~~g~~~TGD~~~~~~----~g~l~~~gR~~~~i~~~ 448 (547)
T PRK13295 384 -----------GAPLPAGQIGRLQVRGCSNFGGYLKRPQLNGTDADGWFDTGDLARIDA----DGYIRISGRSKDVIIRG 448 (547)
T ss_pred -----------CCCCCCCCCCeEEEEcCcccccccCCccccccCCCCCeecceEEEEcC----CceEEEEeccCCeEEEC
Confidence 1245789999999986 356552 99999999973 46899999999999999
Q ss_pred ccccCHHHHHHHHHH
Q 007532 445 SDKTDEAELQNAIDN 459 (599)
Q Consensus 445 GEk~~e~~v~~av~~ 459 (599)
|+|+++.+|+++|.+
T Consensus 449 G~~v~p~~IE~~l~~ 463 (547)
T PRK13295 449 GENIPVVEIEALLYR 463 (547)
T ss_pred CEEECHHHHHHHHHh
Confidence 999999999999965
No 28
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=99.25 E-value=6.1e-10 Score=125.31 Aligned_cols=128 Identities=16% Similarity=0.253 Sum_probs=86.7
Q ss_pred eEEEEecch-hhhHHHHHHHhCCCCCccccccccccccccccCC-CCCCCCCCceeeecCceEEEEeeCCCCCCCCCCCC
Q 007532 307 LDVIVTGAM-AQYIPTLDYYSGGKLPMACTMYASSECYFGLNLN-PICRPSEVSYTIMPNMAYFEFLPQEPSDSFGLTSS 384 (599)
Q Consensus 307 l~~~~~g~~-~~y~~~l~~~~g~~~~~~~~~Y~asEg~i~i~~~-~~~~~~~~~~~l~~~~~ffEFip~~~~~~~~~~~~ 384 (599)
++.+.+|+. ...++.+++.++ ++++ +.||+||+...+... +...++..+. ..++ .-.++++.+.
T Consensus 296 l~~~~~g~~~~~~~~~~~~~~~--~~v~-~~YG~tE~~~~~~~~~~~~~~~~vG~-~~~~-~~~~i~d~~~--------- 361 (542)
T PRK06155 296 VRVALGPGVPAALHAAFRERFG--VDLL-DGYGSTETNFVIAVTHGSQRPGSMGR-LAPG-FEARVVDEHD--------- 361 (542)
T ss_pred eEEEEEcCCCHHHHHHHHHHcC--CCEE-eeecccccCccccCCCCCCCCCCcCc-cCCC-ceEEEECCCC---------
Confidence 556666764 344566777775 7888 999999984322111 1111111222 1222 2345554321
Q ss_pred CCCCcccccCCCCCeEEEEEeec------ccee-------------ccccCCEEEEeeccCCCCEEEEEeecCceeeccc
Q 007532 385 DPQPVDLVDVEMGKEYELVITTY------AGLY-------------RYRVGDILRVIGFHNSAPQFHFVRRKNVLLSIES 445 (599)
Q Consensus 385 ~~~~l~~~ev~~G~~YelviTt~------~GLy-------------RYr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~G 445 (599)
.++..|+.|||+|+.. .|+| +|+|||++++.. ...+.|+||.+|++++.|
T Consensus 362 -------~~~~~g~~Gei~v~~~~~~~~~~GY~~~~~~~~~~~~~~~~~TGD~~~~~~----dG~l~i~GR~~d~i~~~G 430 (542)
T PRK06155 362 -------QELPDGEPGELLLRADEPFAFATGYFGMPEKTVEAWRNLWFHTGDRVVRDA----DGWFRFVDRIKDAIRRRG 430 (542)
T ss_pred -------CCCCCCCceEEEEecCCccccchhhcCCHHHHHHhhcCCcEeccceEEEcC----CceEEEEecCCCEEEeCC
Confidence 2467899999999864 3443 599999999973 458999999999999999
Q ss_pred cccCHHHHHHHHHH
Q 007532 446 DKTDEAELQNAIDN 459 (599)
Q Consensus 446 Ek~~e~~v~~av~~ 459 (599)
+++++.+|+++|.+
T Consensus 431 ~~v~p~eIE~~l~~ 444 (542)
T PRK06155 431 ENISSFEVEQVLLS 444 (542)
T ss_pred EEECHHHHHHHHHh
Confidence 99999999999966
No 29
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=99.24 E-value=6.5e-09 Score=119.22 Aligned_cols=131 Identities=10% Similarity=0.063 Sum_probs=85.3
Q ss_pred ceeEEEEecch---hhhHHHHHHHhCCCCCccccccccccccccc-cCCCCC-----CCCCCceeeecCceEEEEeeCCC
Q 007532 305 KYLDVIVTGAM---AQYIPTLDYYSGGKLPMACTMYASSECYFGL-NLNPIC-----RPSEVSYTIMPNMAYFEFLPQEP 375 (599)
Q Consensus 305 ~~l~~~~~g~~---~~y~~~l~~~~g~~~~~~~~~Y~asEg~i~i-~~~~~~-----~~~~~~~~l~~~~~ffEFip~~~ 375 (599)
+.++.+.+||. ....+.+++.++ .+++ +.||.||....+ ...+.. ..+..+. .+|+.. ...++.++
T Consensus 354 ~~lr~~~~gGe~l~~~~~~~~~~~~~--~~~~-~~yG~TE~~~~~~~~~~~~~~~~~~~gs~G~-p~~g~~-v~i~d~~~ 428 (628)
T TIGR02316 354 SSLHWLFLAGEPLDEPTAHWITDGLG--KPVI-DNYWQTETGWPVLAIMPGLDLKPVKLGSPGL-PMYGYH-LRVLDEAT 428 (628)
T ss_pred cceeEEEEecCCCCHHHHHHHHHHhC--CCEE-ecccccccCceeecCCCCCCcCCCCCCCccc-CcCCce-EEEEECCC
Confidence 34778888874 344566666675 6788 999999985322 111110 0111121 122221 22333221
Q ss_pred CCCCCCCCCCCCCcccccCCCCCeEEEEEeec------ccee-----------------ccccCCEEEEeeccCCCCEEE
Q 007532 376 SDSFGLTSSDPQPVDLVDVEMGKEYELVITTY------AGLY-----------------RYRVGDILRVIGFHNSAPQFH 432 (599)
Q Consensus 376 ~~~~~~~~~~~~~l~~~ev~~G~~YelviTt~------~GLy-----------------RYr~GDvV~v~gf~~~~P~i~ 432 (599)
..+|..|+.|||+|+.. .|+| -|+|||++++.. ...+.
T Consensus 429 ---------------g~~~~~g~~Gel~v~gp~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~g~~d~----dG~l~ 489 (628)
T TIGR02316 429 ---------------GRPCGPNEKGVLTVVPPLPPGCLSTVWGDDARFLKTYWSHFKRPLYSSFDWGIRDE----DGYTF 489 (628)
T ss_pred ---------------CCCCCCCCcEEEEEecCCCccccccccCChHHHHHhhhhcCCCCEEECCceEEEcC----CCcEE
Confidence 12457899999999753 3333 289999999873 45799
Q ss_pred EEeecCceeeccccccCHHHHHHHHHH
Q 007532 433 FVRRKNVLLSIESDKTDEAELQNAIDN 459 (599)
Q Consensus 433 f~gR~~~~l~~~GEk~~e~~v~~av~~ 459 (599)
|+||.+|++++.|+++.+.+|+++|.+
T Consensus 490 i~GR~dd~ik~~G~rv~~~eIE~~l~~ 516 (628)
T TIGR02316 490 ILGRTDDVINVAGHRLGTREIEESVSS 516 (628)
T ss_pred EEEcCcceEEeCCEEeCHHHHHHHHHh
Confidence 999999999999999999999999965
No 30
>PRK06839 acyl-CoA synthetase; Validated
Probab=99.24 E-value=9.7e-10 Score=121.33 Aligned_cols=148 Identities=16% Similarity=0.151 Sum_probs=93.1
Q ss_pred CHHHHHHHHHHhccccccccccccCCCCceeEEEEecch---hhhHHHHHHHhCCCCCccccccccccccc-cccCCCCC
Q 007532 277 NTELAEFIRMECSKENWERIITRIWPNTKYLDVIVTGAM---AQYIPTLDYYSGGKLPMACTMYASSECYF-GLNLNPIC 352 (599)
Q Consensus 277 ~p~~A~~L~~~~~~~~~~g~~~~lWP~l~~l~~~~~g~~---~~y~~~l~~~~g~~~~~~~~~Y~asEg~i-~i~~~~~~ 352 (599)
.|.....|....... .. .+..++.++.||. ....+.++.. | +++. +.||+||+.. .....+..
T Consensus 245 ~P~~~~~l~~~~~~~------~~---~~~~lr~~~~gG~~~~~~~~~~~~~~-g--~~~~-~~YG~tE~~~~~~~~~~~~ 311 (496)
T PRK06839 245 VPTIHQALINCSKFE------TT---NLQSVRWFYNGGAPCPEELMREFIDR-G--FLFG-QGFGMTETSPTVFMLSEED 311 (496)
T ss_pred hHHHHHHHHhCcccc------cC---CCcccceEEECCCCCCHHHHHHHHHh-C--CeeE-eeccCCCCCcceEeccccc
Confidence 677666665433211 11 2233777778874 3455666664 3 7887 9999999843 21111110
Q ss_pred ---CCCCCceeeecCceEEEEeeCCCCCCCCCCCCCCCCcccccCCCCCeEEEEEeec---cceec-------------c
Q 007532 353 ---RPSEVSYTIMPNMAYFEFLPQEPSDSFGLTSSDPQPVDLVDVEMGKEYELVITTY---AGLYR-------------Y 413 (599)
Q Consensus 353 ---~~~~~~~~l~~~~~ffEFip~~~~~~~~~~~~~~~~l~~~ev~~G~~YelviTt~---~GLyR-------------Y 413 (599)
.....+. .+|+. -++.++++. .++.+|+.|||+|++. .|+|. |
T Consensus 312 ~~~~~~~~G~-p~~~~-~~~i~d~~~----------------~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~ 373 (496)
T PRK06839 312 ARRKVGSIGK-PVLFC-DYELIDENK----------------NKVEVGEVGELLIRGPNVMKEYWNRPDATEETIQDGWL 373 (496)
T ss_pred ccccCCCCcc-cCCCc-eEEEECCCc----------------CCCCCCCceEEEEECCCcchhhcCChHHHHHHHcCCCe
Confidence 0011111 11221 234444322 1367999999999864 34442 8
Q ss_pred ccCCEEEEeeccCCCCEEEEEeecCceeeccccccCHHHHHHHHHH
Q 007532 414 RVGDILRVIGFHNSAPQFHFVRRKNVLLSIESDKTDEAELQNAIDN 459 (599)
Q Consensus 414 r~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~GEk~~e~~v~~av~~ 459 (599)
+|||+++... ...+.|+||.+|+++..|+++.+.+|++++.+
T Consensus 374 ~TGDl~~~~~----~g~~~~~GR~~d~i~~~G~~v~p~~iE~~l~~ 415 (496)
T PRK06839 374 CTGDLARVDE----DGFVYIVGRKKEMIISGGENIYPLEVEQVINK 415 (496)
T ss_pred eecceEEEcC----CCcEEEeccccceEEECCEEECHHHHHHHHHh
Confidence 9999999873 45788999999999999999999999999965
No 31
>PRK06164 acyl-CoA synthetase; Validated
Probab=99.24 E-value=3e-09 Score=119.19 Aligned_cols=149 Identities=21% Similarity=0.268 Sum_probs=91.2
Q ss_pred CHHHHHHHHHHhccccccccccccCCCCceeEEEEecchh----hhHHHHHHHhCCCCCccccccccccccccccCCCCC
Q 007532 277 NTELAEFIRMECSKENWERIITRIWPNTKYLDVIVTGAMA----QYIPTLDYYSGGKLPMACTMYASSECYFGLNLNPIC 352 (599)
Q Consensus 277 ~p~~A~~L~~~~~~~~~~g~~~~lWP~l~~l~~~~~g~~~----~y~~~l~~~~g~~~~~~~~~Y~asEg~i~i~~~~~~ 352 (599)
.|.....|.+...+ +..+++ ++.+..++.. ...+.++.. + ++++ +.||+||+...+......
T Consensus 276 ~p~~l~~l~~~~~~-------~~~~~~---l~~~~~~~~~~~~~~~~~~~~~~--~-~~~~-~~YG~tE~~~~~~~~~~~ 341 (540)
T PRK06164 276 NDEMLRRILDTAGE-------RADFPS---ARLFGFASFAPALGELAALARAR--G-VPLT-GLYGSSEVQALVALQPAT 341 (540)
T ss_pred CHHHHHHHHHhhcc-------cCCCcc---eeeeeeccCCcchHHHHHHHhhc--C-Ccee-cceeeccccceeeccCCC
Confidence 67766666554111 122344 4444444432 223333333 3 7888 899999984322211110
Q ss_pred CC-----CCCceeeecCceEEEEeeCCCCCCCCCCCCCCCCcccccCCCCCeEEEEEee---cccee-------------
Q 007532 353 RP-----SEVSYTIMPNMAYFEFLPQEPSDSFGLTSSDPQPVDLVDVEMGKEYELVITT---YAGLY------------- 411 (599)
Q Consensus 353 ~~-----~~~~~~l~~~~~ffEFip~~~~~~~~~~~~~~~~l~~~ev~~G~~YelviTt---~~GLy------------- 411 (599)
.. ...+..+.++ ...+++++++. ..+..|+.|||+|++ ..|+|
T Consensus 342 ~~~~~~~~~~g~~~~~~-~~~~i~d~~~~---------------~~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~~~~~ 405 (540)
T PRK06164 342 DPVSVRIEGGGRPASPE-ARVRARDPQDG---------------ALLPDGESGEIEIRAPSLMRGYLDNPDATARALTDD 405 (540)
T ss_pred CCCcceeccCccccCCC-eEEEEecCCCC---------------cCCCCCCeeEEEEecccccccccCCchhhhhcccCC
Confidence 00 0112222222 24555654332 135789999999987 24443
Q ss_pred -ccccCCEEEEeeccCCCCEEEEEeecCceeeccccccCHHHHHHHHHH
Q 007532 412 -RYRVGDILRVIGFHNSAPQFHFVRRKNVLLSIESDKTDEAELQNAIDN 459 (599)
Q Consensus 412 -RYr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~GEk~~e~~v~~av~~ 459 (599)
-|+|||++++.. ...+.|+||.++++++.|+++++.+|+++|..
T Consensus 406 ~~~~TGDl~~~~~----~g~l~~~GR~~~~i~~~G~~i~p~eIE~~l~~ 450 (540)
T PRK06164 406 GYFRTGDLGYTRG----DGQFVYQTRMGDSLRLGGFLVNPAEIEHALEA 450 (540)
T ss_pred CceecCCeEEEcC----CceEEEEeecCCeEEECCEEcCHHHHHHHHHh
Confidence 289999999874 45889999999999999999999999999965
No 32
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.23 E-value=1.7e-09 Score=119.78 Aligned_cols=151 Identities=17% Similarity=0.175 Sum_probs=95.8
Q ss_pred CCHHHHHHHHHHhccccccccccccCCCCceeEEEEecch---hhhHHHHHHHhCCCCCcccccccccccc-cc-ccCCC
Q 007532 276 PNTELAEFIRMECSKENWERIITRIWPNTKYLDVIVTGAM---AQYIPTLDYYSGGKLPMACTMYASSECY-FG-LNLNP 350 (599)
Q Consensus 276 ~~p~~A~~L~~~~~~~~~~g~~~~lWP~l~~l~~~~~g~~---~~y~~~l~~~~g~~~~~~~~~Y~asEg~-i~-i~~~~ 350 (599)
..|.....|.+.....+ . ++..|+.+++||. ...++.+++.++. .+++ +.||+||+. ++ .+...
T Consensus 261 ~~p~~~~~l~~~~~~~~------~---~~~~l~~v~~~g~~~~~~~~~~~~~~~~~-~~~~-~~YG~tE~~~~~~~~~~~ 329 (513)
T PRK07656 261 GPPTMYNSLLQHPDRSA------E---DLSSLRLAVTGAASMPVALLERFESELGV-DIVL-TGYGLSEASGVTTFNRLD 329 (513)
T ss_pred chHHHHHHHHcCCCcCC------C---CccceeeEEecCCCCCHHHHHHHHHHcCC-CceE-eEEccccCCCceeecCcc
Confidence 36777777655433211 1 2334778887774 3455677777762 2777 999999983 22 21100
Q ss_pred C-CC--CCCCceeeecCceEEEEeeCCCCCCCCCCCCCCCCcccccCCCCCeEEEEEeec---ccee----------c--
Q 007532 351 I-CR--PSEVSYTIMPNMAYFEFLPQEPSDSFGLTSSDPQPVDLVDVEMGKEYELVITTY---AGLY----------R-- 412 (599)
Q Consensus 351 ~-~~--~~~~~~~l~~~~~ffEFip~~~~~~~~~~~~~~~~l~~~ev~~G~~YelviTt~---~GLy----------R-- 412 (599)
. .. +...+ ...++ .-++.++++. ..++.|+.|||+|++. .|+| +
T Consensus 330 ~~~~~~~~~vG-~~~~~-~~~~i~d~~~----------------~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~ 391 (513)
T PRK07656 330 DDRKTVAGTIG-TAIAG-VENKIVNELG----------------EEVPVGEVGELLVRGPNVMKGYYDDPEATAAAIDAD 391 (513)
T ss_pred ccccccCCCcc-ccCCC-cEEEEECCCC----------------CCCCCCCceEEEEEcchhhhhhcCCHHHHhhhhccC
Confidence 0 00 01111 11222 2344444221 2457899999999864 3333 2
Q ss_pred --cccCCEEEEeeccCCCCEEEEEeecCceeeccccccCHHHHHHHHHH
Q 007532 413 --YRVGDILRVIGFHNSAPQFHFVRRKNVLLSIESDKTDEAELQNAIDN 459 (599)
Q Consensus 413 --Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~GEk~~e~~v~~av~~ 459 (599)
|+|||+++... ...+.++||.++++++.|+++++.+|+++|.+
T Consensus 392 ~~~~tGDl~~~~~----~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~ 436 (513)
T PRK07656 392 GWLHTGDLGRLDE----EGYLYIVDRKKDMFIVGGFNVYPAEVEEVLYE 436 (513)
T ss_pred CceeccceEEEcC----CeeEEEEecccceEEeCCEEeCHHHHHHHHHh
Confidence 89999999973 46899999999999999999999999999965
No 33
>PRK06145 acyl-CoA synthetase; Validated
Probab=99.22 E-value=2.4e-10 Score=126.37 Aligned_cols=151 Identities=11% Similarity=0.083 Sum_probs=97.7
Q ss_pred CHHHHHHHHHHhccccccccccccCCCCceeEEEEecch---hhhHHHHHHHhCCCCCccccccccccccccccCCC---
Q 007532 277 NTELAEFIRMECSKENWERIITRIWPNTKYLDVIVTGAM---AQYIPTLDYYSGGKLPMACTMYASSECYFGLNLNP--- 350 (599)
Q Consensus 277 ~p~~A~~L~~~~~~~~~~g~~~~lWP~l~~l~~~~~g~~---~~y~~~l~~~~g~~~~~~~~~Y~asEg~i~i~~~~--- 350 (599)
.|.....|........ .-.++ ++++++||. ...++.+++.+++ ++++ +.||+||+........
T Consensus 245 ~P~~~~~ll~~~~~~~------~~~~~---l~~~~~gG~~~~~~~~~~~~~~~~~-~~v~-~~YG~tE~~~~~~~~~~~~ 313 (497)
T PRK06145 245 APVMLSRVLTVPDRDR------FDLDS---LAWCIGGGEKTPESRIRDFTRVFTR-ARYI-DAYGLTETCSGDTLMEAGR 313 (497)
T ss_pred hHHHHHHHHcCCCccc------ccccc---ceEEEecCCCCCHHHHHHHHHHcCC-CceE-EeecCcccCCcceeccCcc
Confidence 5666666554332210 11234 677777874 3456777777766 8888 8999999854221110
Q ss_pred CC-CCCCCceeeecCceEEEEeeCCCCCCCCCCCCCCCCcccccCCCCCeEEEEEee---ccceec-------------c
Q 007532 351 IC-RPSEVSYTIMPNMAYFEFLPQEPSDSFGLTSSDPQPVDLVDVEMGKEYELVITT---YAGLYR-------------Y 413 (599)
Q Consensus 351 ~~-~~~~~~~~l~~~~~ffEFip~~~~~~~~~~~~~~~~l~~~ev~~G~~YelviTt---~~GLyR-------------Y 413 (599)
.+ .+...+.. .|+. -.+.++++. .++.+|+.+||+++. ..|+|. |
T Consensus 314 ~~~~~~~~G~~-~~~~-~~~i~~~~~----------------~~~~~~~~Gel~v~g~~~~~Gy~~~~~~~~~~~~~~~~ 375 (497)
T PRK06145 314 EIEKIGSTGRA-LAHV-EIRIADGAG----------------RWLPPNMKGEICMRGPKVTKGYWKDPEKTAEAFYGDWF 375 (497)
T ss_pred ccccCCCcccC-CCCc-eEEEECCCC----------------CCCCCCCceEEEEECcchhhhhcCChHHHHHHHhCCCe
Confidence 00 11112221 2222 233343211 135678999999975 466763 9
Q ss_pred ccCCEEEEeeccCCCCEEEEEeecCceeeccccccCHHHHHHHHHHH
Q 007532 414 RVGDILRVIGFHNSAPQFHFVRRKNVLLSIESDKTDEAELQNAIDNA 460 (599)
Q Consensus 414 r~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~GEk~~e~~v~~av~~a 460 (599)
+|||+++... ...+.++||.++++++.|+++.+.+|+++|.+.
T Consensus 376 ~TGDl~~~~~----~g~l~~~GR~~~~i~~~G~~v~~~~IE~~l~~~ 418 (497)
T PRK06145 376 RSGDVGYLDE----EGFLYLTDRKKDMIISGGENIASSEVERVIYEL 418 (497)
T ss_pred eccceEEEcC----CCcEEEeccccceEEeCCeEECHHHHHHHHHhC
Confidence 9999999873 458999999999999999999999999999763
No 34
>PRK07470 acyl-CoA synthetase; Validated
Probab=99.22 E-value=1.8e-09 Score=120.52 Aligned_cols=149 Identities=11% Similarity=0.113 Sum_probs=93.0
Q ss_pred CHHHHHHHHHHhccccccccccccCCCCceeEEEEecch---hhhHHHHHHHhCCCCCccccccccccccccccCCCC--
Q 007532 277 NTELAEFIRMECSKENWERIITRIWPNTKYLDVIVTGAM---AQYIPTLDYYSGGKLPMACTMYASSECYFGLNLNPI-- 351 (599)
Q Consensus 277 ~p~~A~~L~~~~~~~~~~g~~~~lWP~l~~l~~~~~g~~---~~y~~~l~~~~g~~~~~~~~~Y~asEg~i~i~~~~~-- 351 (599)
.|.....|.+..... ....++ ++.+++||. ...+.++.+.+| .+++ +.||+||+...+...+.
T Consensus 261 ~P~~~~~l~~~~~~~------~~~~~~---lr~~~~gG~~l~~~~~~~~~~~~g--~~~~-~~YG~TE~~~~~~~~~~~~ 328 (528)
T PRK07470 261 VPTILKMLVEHPAVD------RYDHSS---LRYVIYAGAPMYRADQKRALAKLG--KVLV-QYFGLGEVTGNITVLPPAL 328 (528)
T ss_pred hHHHHHHHHhCcCcC------CCCCcc---eEEEEEcCCCCCHHHHHHHHHHhC--cHHH-HhCCCcccCCceeecchhh
Confidence 666666665432211 122344 777777774 344556666665 5777 89999997432211100
Q ss_pred --------CCCCCCceeeecCceEEEEeeCCCCCCCCCCCCCCCCcccccCCCCCeEEEEEeec---cceec--------
Q 007532 352 --------CRPSEVSYTIMPNMAYFEFLPQEPSDSFGLTSSDPQPVDLVDVEMGKEYELVITTY---AGLYR-------- 412 (599)
Q Consensus 352 --------~~~~~~~~~l~~~~~ffEFip~~~~~~~~~~~~~~~~l~~~ev~~G~~YelviTt~---~GLyR-------- 412 (599)
......+. ..++. -++.++.+ ..++..|+.|||+|++. .|+|.
T Consensus 329 ~~~~~~~~~~~~~~G~-~~~g~-~~~i~d~~----------------~~~~~~g~~Gel~i~~~~~~~gy~~~~~~~~~~ 390 (528)
T PRK07470 329 HDAEDGPDARIGTCGF-ERTGM-EVQIQDDE----------------GRELPPGETGEICVIGPAVFAGYYNNPEANAKA 390 (528)
T ss_pred ccccccccceeeccCc-ccCCc-EEEEECCC----------------CCCCCCCCceEEEEeCCccchhhcCCHHHHHhh
Confidence 00001111 11111 23333321 12467899999999753 55554
Q ss_pred -----cccCCEEEEeeccCCCCEEEEEeecCceeeccccccCHHHHHHHHHH
Q 007532 413 -----YRVGDILRVIGFHNSAPQFHFVRRKNVLLSIESDKTDEAELQNAIDN 459 (599)
Q Consensus 413 -----Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~GEk~~e~~v~~av~~ 459 (599)
|+|||++++.. ...+.+.||.++++++.|+++++.+||.+|..
T Consensus 391 ~~~~~~~TGDl~~~~~----~g~l~~~GR~dd~i~~~G~~v~~~~IE~~l~~ 438 (528)
T PRK07470 391 FRDGWFRTGDLGHLDA----RGFLYITGRASDMYISGGSNVYPREIEEKLLT 438 (528)
T ss_pred hcCCcEecceeEEEcc----CCeEEEeCCccceEEeCCEEECHHHHHHHHHh
Confidence 99999999873 46799999999999999999999999999965
No 35
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=99.22 E-value=5.8e-09 Score=120.30 Aligned_cols=228 Identities=16% Similarity=0.137 Sum_probs=122.3
Q ss_pred CceeEEEEecch---hhhHHHHHHHhCCCCCccccccccccccccccC-CCCCCC--CCCceeeecCceEEEEeeCCCCC
Q 007532 304 TKYLDVIVTGAM---AQYIPTLDYYSGGKLPMACTMYASSECYFGLNL-NPICRP--SEVSYTIMPNMAYFEFLPQEPSD 377 (599)
Q Consensus 304 l~~l~~~~~g~~---~~y~~~l~~~~g~~~~~~~~~Y~asEg~i~i~~-~~~~~~--~~~~~~l~~~~~ffEFip~~~~~ 377 (599)
+..++.+++||. ......+.+.++.++.+. ..||+||...++.. .+..+. +..+. ..|+.. ...++.+
T Consensus 383 l~sLr~i~~gGe~l~~~~~~~~~~~~~~~~~~~-~~yG~TE~~~~~~~~~~~~~~~~g~~g~-p~~g~~-v~ivd~~--- 456 (652)
T TIGR01217 383 LSALQCVASTGSPLPPDGFRWVYDEIKADVWLA-SISGGTDICSCFAGANPTLPVHIGEIQA-PGLGTA-VQSWDPE--- 456 (652)
T ss_pred hhheeEEEeecCCCCHHHHHHHHHHhCCCceEE-eccCHHHHhccccCCCCCCCCcCCccCC-CcCCCc-eEEECCC---
Confidence 445888888885 234455555565335555 88999995322211 111110 00111 011111 1112111
Q ss_pred CCCCCCCCCCCcccccCCCCCeEEEEEeec-----ccee------c------------cccCCEEEEeeccCCCCEEEEE
Q 007532 378 SFGLTSSDPQPVDLVDVEMGKEYELVITTY-----AGLY------R------------YRVGDILRVIGFHNSAPQFHFV 434 (599)
Q Consensus 378 ~~~~~~~~~~~l~~~ev~~G~~YelviTt~-----~GLy------R------------Yr~GDvV~v~gf~~~~P~i~f~ 434 (599)
..++ +|+.|||+++.. .|+| + |++||+++++. ...+.|+
T Consensus 457 -------------g~~~-~g~~GEl~v~gp~p~~~~gy~~~~~~t~~~~~~~~~~~g~~~tGDlg~~d~----dG~l~i~ 518 (652)
T TIGR01217 457 -------------GKPV-TGEVGELVCTNPMPSMPIRFWNDPDGSKYRDAYFDTYPGVWRHGDWITLTP----RGGIVIH 518 (652)
T ss_pred -------------CCCC-CCCccEEEEecCCCccccceeCCCccchhHHhhhcCCCCEEEcCCcEEECC----CCcEEEE
Confidence 1133 589999999752 3444 1 78999999983 4689999
Q ss_pred eecCceeeccccccCHHHHHHHHHHHHHHhhhcCCeEEeeEEee-cCCCCCceEEEEEEEeecCCCCCCChHHHHHHHHH
Q 007532 435 RRKNVLLSIESDKTDEAELQNAIDNASRLLREFNTSVGEYTSYA-NTKTIPGHYVIYWELLIKDSANSPTNEVLNQCCLA 513 (599)
Q Consensus 435 gR~~~~l~~~GEk~~e~~v~~av~~a~~~l~~~g~~l~~f~~~~-~~~~~p~hY~l~~E~e~~~~~~~~~~~~l~~~~~~ 513 (599)
||.+|+|++.|+++.+.+|+++|.+. .+ |.+-+|.. +.....-.-+.|+.+.. + ...+++..+++.+.
T Consensus 519 GR~dd~I~~~G~ri~p~EIE~~l~~~------p~--V~eaavvg~~~~~~ge~~~afVv~~~-~--~~~~~~~~~~l~~~ 587 (652)
T TIGR01217 519 GRSDSTLNPQGVRMGSAEIYNAVERL------DE--VRESLCIGQEQPDGGYRVVLFVHLAP-G--ATLDDALLDRIKRT 587 (652)
T ss_pred ecccCeEecCCEEcCHHHHHHHHHhC------CC--cceEEEEeeecCCCCEEEEEEEEECC-C--CCCCHHHHHHHHHH
Confidence 99999999999999999999999763 12 33433322 11111123346666642 2 12333333334444
Q ss_pred HHHHhChhhHhccccCCccCCeEEEEeC------CccHHHHHHHHHhcCCCCCCCCCCcccCCHhHHHHHhc
Q 007532 514 MEECLNSVYRQGRVADNSIGPLEIRVVR------NGTFEELMDYAISRGASINQYKVPRCVNFTPIVELLDS 579 (599)
Q Consensus 514 ld~~LN~~Y~~~R~~~g~l~p~~v~iv~------~gtF~~~~~~~~~~G~~~~Q~K~Pr~~~~~~~~~~L~~ 579 (599)
+.+.|.+ | .-|-.|.+|+ .|--.+-.-..+.+| ..++.+--+.|++.++.+.+
T Consensus 588 ~~~~l~~-~---------~~P~~i~~v~~lP~T~sGKi~r~~Lr~~~~~---~~~~~~~~~~~~~~l~~~~~ 646 (652)
T TIGR01217 588 IRAGLSP-R---------HVPDEIIEVPGIPHTLTGKRVEVAVKRVLQG---TPVDNPGAIDNPELLDLYEE 646 (652)
T ss_pred HHhhCCC-C---------cCCCEEEECCCCCCCCCccChHHHHHHHHcC---CCCCCcccccCHHHHHHHHH
Confidence 4444411 1 1244555543 233222111111233 34667888899999998854
No 36
>PRK09088 acyl-CoA synthetase; Validated
Probab=99.22 E-value=6.3e-10 Score=122.94 Aligned_cols=130 Identities=21% Similarity=0.314 Sum_probs=84.9
Q ss_pred eeEEEEecchhhhHHHHHHHh-CCCCCccccccccccccc--cccCCCC---CCCCCCceeeecCceEEEEeeCCCCCCC
Q 007532 306 YLDVIVTGAMAQYIPTLDYYS-GGKLPMACTMYASSECYF--GLNLNPI---CRPSEVSYTIMPNMAYFEFLPQEPSDSF 379 (599)
Q Consensus 306 ~l~~~~~g~~~~y~~~l~~~~-g~~~~~~~~~Y~asEg~i--~i~~~~~---~~~~~~~~~l~~~~~ffEFip~~~~~~~ 379 (599)
.++.+++||...-...++++. .+ ++++ +.||+||+.. +++..+. ..+...+. ..|+ ...++++.+.
T Consensus 253 ~l~~~~~gG~~~~~~~~~~~~~~g-~~v~-~~YG~TE~~~~~~~~~~~~~~~~~~~~vG~-~~~~-~~~~i~d~~~---- 324 (488)
T PRK09088 253 HLTALFTGGAPHAAEDILGWLDDG-IPMV-DGFGMSEAGTVFGMSVDCDVIRAKAGAAGI-PTPT-VQTRVVDDQG---- 324 (488)
T ss_pred cceEEEecCCCCCHHHHHHHHHhC-Ccee-eeecccccccccccCCCcccccccCCcccc-CCCC-cEEEEECCCC----
Confidence 377888888532223333332 13 8888 8999999842 2221111 01111221 2222 3455554321
Q ss_pred CCCCCCCCCcccccCCCCCeEEEEEee---ccceec--------------cccCCEEEEeeccCCCCEEEEEeecCceee
Q 007532 380 GLTSSDPQPVDLVDVEMGKEYELVITT---YAGLYR--------------YRVGDILRVIGFHNSAPQFHFVRRKNVLLS 442 (599)
Q Consensus 380 ~~~~~~~~~l~~~ev~~G~~YelviTt---~~GLyR--------------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~ 442 (599)
.++..|+.|||+|++ ..|+|+ |+|||++++.. ...+.|+||.+++++
T Consensus 325 ------------~~~~~g~~Gel~v~~~~~~~gY~~~~~~~~~~~~~~g~~~TGDl~~~~~----~g~l~i~GR~~d~i~ 388 (488)
T PRK09088 325 ------------NDCPAGVPGELLLRGPNLSPGYWRRPQATARAFTGDGWFRTGDIARRDA----DGFFWVVDRKKDMFI 388 (488)
T ss_pred ------------CCCcCCCceEEEEECCccchhhcCChhhhhhhhcCCCCeeecceEEEcC----CCcEEEeccccceEE
Confidence 135788999999986 355553 99999999973 457999999999999
Q ss_pred ccccccCHHHHHHHHHH
Q 007532 443 IESDKTDEAELQNAIDN 459 (599)
Q Consensus 443 ~~GEk~~e~~v~~av~~ 459 (599)
+.|+|+++.+||++|.+
T Consensus 389 ~~G~~i~~~~iE~~l~~ 405 (488)
T PRK09088 389 SGGENVYPAEIEAVLAD 405 (488)
T ss_pred eCCEEECHHHHHHHHHh
Confidence 99999999999999965
No 37
>TIGR03205 pimA dicarboxylate--CoA ligase PimA. PimA, a member of a large family of acyl-CoA ligases, is found in a characteristic operon pimFABCDE for the metabolism of pimelate and related compounds. It is found, so far, in Bradyrhizobium japonicum and several strains of Rhodopseudomonas palustris. PimA from R. palustris was shown to be active as a CoA ligase for C(7) to C(14) dicarboxylates and fatty acids.
Probab=99.21 E-value=3.2e-10 Score=127.22 Aligned_cols=130 Identities=19% Similarity=0.272 Sum_probs=86.9
Q ss_pred eEEEEecch---hhhHHHHHHHhCCCCCccccccccccccc-cccCCCC--CCCCCCceeeecCceEEEEeeCCCCCCCC
Q 007532 307 LDVIVTGAM---AQYIPTLDYYSGGKLPMACTMYASSECYF-GLNLNPI--CRPSEVSYTIMPNMAYFEFLPQEPSDSFG 380 (599)
Q Consensus 307 l~~~~~g~~---~~y~~~l~~~~g~~~~~~~~~Y~asEg~i-~i~~~~~--~~~~~~~~~l~~~~~ffEFip~~~~~~~~ 380 (599)
+++++.||. ....+.++..++ ++++ +.||.||+.. +....+. ..+...++++ +.. -++.+..++.+
T Consensus 314 l~~i~~gg~~~~~~~~~~~~~~~~--~~~~-~~YG~TE~~~~~~~~~~~~~~~~~~~G~~~-~~~-~~~v~~~d~~~--- 385 (541)
T TIGR03205 314 LATIGSGGAPLPVEVANFFERKTG--LKLK-SGWGMTETCSPGTGHPPEGPDKPGSIGLML-PGI-ELDVVSLDDPT--- 385 (541)
T ss_pred cceEEEccccCCHHHHHHHHHHhC--CCee-cccccccCCcccccCCCCCCCCCCCcceec-cCc-eeEEEecCCCC---
Confidence 678888874 244566666665 7888 9999999843 2111111 1112234432 322 23333322211
Q ss_pred CCCCCCCCcccccCCCCCeEEEEEee---cccee-------------ccccCCEEEEeeccCCCCEEEEEeecCceeecc
Q 007532 381 LTSSDPQPVDLVDVEMGKEYELVITT---YAGLY-------------RYRVGDILRVIGFHNSAPQFHFVRRKNVLLSIE 444 (599)
Q Consensus 381 ~~~~~~~~l~~~ev~~G~~YelviTt---~~GLy-------------RYr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~ 444 (599)
.++++|+.|||++++ ..|+| +|+|||++++.. ...+.|+||.++++++.
T Consensus 386 -----------~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~TGD~~~~~~----~g~l~i~GR~~~~i~~~ 450 (541)
T TIGR03205 386 -----------KVLPPGEVGELRIRGPNVTRGYWNRPEESAEAFVGDRFLTGDIGYMDT----DGYFFLVDRKKDMIISG 450 (541)
T ss_pred -----------ccCCCCCeeEEEEecCCccccccCChhhhHhhhccCCcccCceEEEcC----CceEEEEccccCeEEEC
Confidence 245789999999986 34555 589999999863 35789999999999999
Q ss_pred ccccCHHHHHHHHHH
Q 007532 445 SDKTDEAELQNAIDN 459 (599)
Q Consensus 445 GEk~~e~~v~~av~~ 459 (599)
|+++++.+|++++.+
T Consensus 451 G~~i~~~eIE~~l~~ 465 (541)
T TIGR03205 451 GFNVYPQMIEQAIYE 465 (541)
T ss_pred CEEECHHHHHHHHHh
Confidence 999999999999975
No 38
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional
Probab=99.21 E-value=2e-09 Score=118.94 Aligned_cols=128 Identities=14% Similarity=0.199 Sum_probs=80.8
Q ss_pred eEEEEecch---hhhHHHHHHHhCCCCCccccccccccccccccCCCCCCCC-------CCceeeecCceEEEEeeCCCC
Q 007532 307 LDVIVTGAM---AQYIPTLDYYSGGKLPMACTMYASSECYFGLNLNPICRPS-------EVSYTIMPNMAYFEFLPQEPS 376 (599)
Q Consensus 307 l~~~~~g~~---~~y~~~l~~~~g~~~~~~~~~Y~asEg~i~i~~~~~~~~~-------~~~~~l~~~~~ffEFip~~~~ 376 (599)
++.++.||. ....+.+++.+++ ++++ +.||+||....+...+.++.. ..++ ..++.. ...++.+
T Consensus 262 l~~i~~~G~~l~~~~~~~~~~~~~~-~~~~-~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~-~~i~d~~-- 335 (503)
T PRK04813 262 LTHFLFCGEELPHKTAKKLLERFPS-ATIY-NTYGPTEATVAVTSIEITDEMLDQYKRLPIGY-AKPDSP-LLIIDEE-- 335 (503)
T ss_pred ceEEEEecCcCCHHHHHHHHHHCCC-ceEE-eCcccchheeEEEEEEecccccccCCCCcccc-cCCCCE-EEEECCC--
Confidence 556666653 3566777777766 7888 999999963221110111000 0111 111111 0111111
Q ss_pred CCCCCCCCCCCCcccccCCCCCeEEEEEeec---ccee-----------------ccccCCEEEEeeccCCCCEEEEEee
Q 007532 377 DSFGLTSSDPQPVDLVDVEMGKEYELVITTY---AGLY-----------------RYRVGDILRVIGFHNSAPQFHFVRR 436 (599)
Q Consensus 377 ~~~~~~~~~~~~l~~~ev~~G~~YelviTt~---~GLy-----------------RYr~GDvV~v~gf~~~~P~i~f~gR 436 (599)
..++.+|+.|||+++.. .|+| -|+|||++++ . ...+.|.||
T Consensus 336 --------------~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~g~~~~~tGD~~~~-~----~g~~~~~GR 396 (503)
T PRK04813 336 --------------GTKLPDGEQGEIVISGPSVSKGYLNNPEKTAEAFFTFDGQPAYHTGDAGYL-E----DGLLFYQGR 396 (503)
T ss_pred --------------CCCCCCCCceEEEEeccccccccCCChhHhHHhhccCCCceeEECCceEEe-e----CCeEEEecc
Confidence 12456889999999762 1221 2999999998 3 357999999
Q ss_pred cCceeeccccccCHHHHHHHHHH
Q 007532 437 KNVLLSIESDKTDEAELQNAIDN 459 (599)
Q Consensus 437 ~~~~l~~~GEk~~e~~v~~av~~ 459 (599)
.+|++++.|+|+++.+|++++..
T Consensus 397 ~~d~i~~~G~~v~~~~iE~~l~~ 419 (503)
T PRK04813 397 IDFQIKLNGYRIELEEIEQNLRQ 419 (503)
T ss_pred ccceEEECcEEeCHHHHHHHHHh
Confidence 99999999999999999999976
No 39
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=99.21 E-value=2.5e-09 Score=118.37 Aligned_cols=129 Identities=14% Similarity=0.201 Sum_probs=82.9
Q ss_pred eEEEEecch---hhhHHHHHHHhCCCCCccccccccccccccccCCC-------CCCCCCCceeeecCceEEEEeeCCCC
Q 007532 307 LDVIVTGAM---AQYIPTLDYYSGGKLPMACTMYASSECYFGLNLNP-------ICRPSEVSYTIMPNMAYFEFLPQEPS 376 (599)
Q Consensus 307 l~~~~~g~~---~~y~~~l~~~~g~~~~~~~~~Y~asEg~i~i~~~~-------~~~~~~~~~~l~~~~~ffEFip~~~~ 376 (599)
++.++.||. ....+.+.+.+++ ++++ ..||+||+..++.... .+.....++. .|+.. ...++.+
T Consensus 260 l~~~~~~G~~~~~~~~~~~~~~~~~-~~~~-~~yG~tE~~~~~~~~~~~~~~~~~~~~~~vg~~-~~~~~-~~i~~~~-- 333 (502)
T TIGR01734 260 LTHFLFCGEELPVKTAKALLERFPK-ATIY-NTYGPTEATVAVTSVKITQEILDQYPRLPIGFA-KPDMN-LFIMDEE-- 333 (502)
T ss_pred ccEEEEcCCcCCHHHHHHHHHHCCC-cEEE-eCccCCcceEEEEEEEccccccccCCccccccc-cCCCE-EEEECCC--
Confidence 556666663 3556777777766 8888 9999999743222110 0000001111 11111 1111111
Q ss_pred CCCCCCCCCCCCcccccCCCCCeEEEEEeec---ccee-----------------ccccCCEEEEeeccCCCCEEEEEee
Q 007532 377 DSFGLTSSDPQPVDLVDVEMGKEYELVITTY---AGLY-----------------RYRVGDILRVIGFHNSAPQFHFVRR 436 (599)
Q Consensus 377 ~~~~~~~~~~~~l~~~ev~~G~~YelviTt~---~GLy-----------------RYr~GDvV~v~gf~~~~P~i~f~gR 436 (599)
...+.+|+.+||++++. .|+| -|+|||+.+++. . .+.++||
T Consensus 334 --------------~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~~~~TGDlg~~~~---~--~l~i~GR 394 (502)
T TIGR01734 334 --------------GEPLPEGEKGEIVIVGPSVSKGYLNNPEKTAEAFFSHEGQPAYRTGDAGTITD---G--QLFYQGR 394 (502)
T ss_pred --------------CCCCCCCCeeEEEEccccccccccCCcccchHhheeCCCcEEEECCCEEEEEC---C--EEEEecc
Confidence 12357899999999752 3443 289999999983 3 9999999
Q ss_pred cCceeeccccccCHHHHHHHHHHH
Q 007532 437 KNVLLSIESDKTDEAELQNAIDNA 460 (599)
Q Consensus 437 ~~~~l~~~GEk~~e~~v~~av~~a 460 (599)
.+|+++++|+|+++.+|++++.+.
T Consensus 395 ~~d~i~~~G~~v~~~~IE~~l~~~ 418 (502)
T TIGR01734 395 LDFQIKLHGYRIELEDIEFNLRQS 418 (502)
T ss_pred ccCeEEECcEEeCHHHHHHHHHcC
Confidence 999999999999999999999763
No 40
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=99.20 E-value=7.1e-10 Score=118.99 Aligned_cols=148 Identities=18% Similarity=0.254 Sum_probs=96.0
Q ss_pred CCHHHHHHHHHHhccccccccccccCCCCceeEEEEecch---hhhHHHHHHHhCCCCCccccccccccccccc---cCC
Q 007532 276 PNTELAEFIRMECSKENWERIITRIWPNTKYLDVIVTGAM---AQYIPTLDYYSGGKLPMACTMYASSECYFGL---NLN 349 (599)
Q Consensus 276 ~~p~~A~~L~~~~~~~~~~g~~~~lWP~l~~l~~~~~g~~---~~y~~~l~~~~g~~~~~~~~~Y~asEg~i~i---~~~ 349 (599)
..|.....|.+... ...++ ++.+..||. ...++.+++.+++ ++++ ..||+||+...+ +..
T Consensus 217 ~~p~~~~~l~~~~~---------~~~~~---l~~v~~~g~~~~~~~~~~~~~~~~~-~~i~-~~YG~tE~g~~~~~~~~~ 282 (408)
T TIGR01733 217 LTPSLLALLAAALP---------PALAS---LRLVILGGEALTPALVDRWRARGPG-ARLI-NLYGPTETTVWSTATLVD 282 (408)
T ss_pred eCHHHHHHHHHhhh---------hcccC---ceEEEEeCccCCHHHHHHHHHhCCC-cEEE-ecccCCceEEEEEEEEcC
Confidence 37777777655432 12234 667777763 4566778888876 7888 999999984322 111
Q ss_pred CCCCC----CCCceeeecCceEEEEeeCCCCCCCCCCCCCCCCcccccCCCCCeEEEEEee---cccee-----------
Q 007532 350 PICRP----SEVSYTIMPNMAYFEFLPQEPSDSFGLTSSDPQPVDLVDVEMGKEYELVITT---YAGLY----------- 411 (599)
Q Consensus 350 ~~~~~----~~~~~~l~~~~~ffEFip~~~~~~~~~~~~~~~~l~~~ev~~G~~YelviTt---~~GLy----------- 411 (599)
..... ...+. ..|+. ....++++ ..++..|+.|||+|+. ..|+|
T Consensus 283 ~~~~~~~~~~~~G~-~~~~~-~~~i~~~~----------------~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~ 344 (408)
T TIGR01733 283 ADDAPRESPVPIGR-PLANT-RLYVLDDD----------------LRPVPVGVVGELYIGGPGVARGYLNRPELTAERFV 344 (408)
T ss_pred ccccCCccccccCc-ccCCc-eEEEECCC----------------CCCCCCCCceEEEecCccccccccCChhhhhccee
Confidence 11100 00111 12221 12233322 1245789999999986 24444
Q ss_pred -----------ccccCCEEEEeeccCCCCEEEEEeecCceeeccccccCHHHHHHHHHH
Q 007532 412 -----------RYRVGDILRVIGFHNSAPQFHFVRRKNVLLSIESDKTDEAELQNAIDN 459 (599)
Q Consensus 412 -----------RYr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~GEk~~e~~v~~av~~ 459 (599)
.|+|||++++.. ...+.|+||.++++++.|+++++.+|+++|..
T Consensus 345 ~~~~~~~~~~~~~~TGDl~~~d~----~g~~~~~gR~~~~i~~~G~~v~~~~ie~~l~~ 399 (408)
T TIGR01733 345 PDPFAGGDGARLYRTGDLVRYLP----DGNLEFLGRIDDQVKIRGYRIELGEIEAALLR 399 (408)
T ss_pred eCCCCCCCCceEEECCceEEEcC----CCCEEEeeccCCEEEeCeEEechHHHHHHHhc
Confidence 599999999984 35799999999999999999999999999964
No 41
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB.
Probab=99.20 E-value=3.7e-09 Score=118.25 Aligned_cols=150 Identities=14% Similarity=0.178 Sum_probs=94.8
Q ss_pred CHHHHHHHHHHhccccccccccccCCCCceeEEEEecch---hhhHHHHHHHhCCCCCccccccccccccccccC-CCC-
Q 007532 277 NTELAEFIRMECSKENWERIITRIWPNTKYLDVIVTGAM---AQYIPTLDYYSGGKLPMACTMYASSECYFGLNL-NPI- 351 (599)
Q Consensus 277 ~p~~A~~L~~~~~~~~~~g~~~~lWP~l~~l~~~~~g~~---~~y~~~l~~~~g~~~~~~~~~Y~asEg~i~i~~-~~~- 351 (599)
.|..+..|.+...+.. . .+..++++++||. ......+++.+| ++++ +.||+||+.+.... ...
T Consensus 280 ~p~~~~~l~~~~~~~~------~---~~~~lr~~~~gG~~l~~~~~~~~~~~~g--~~~~-~~YG~tE~~~~~~~~~~~~ 347 (527)
T TIGR02275 280 VPPAVALWMQAASKSR------Y---DLSSLKLLQVGGAKFSEAAARRVPAVFG--CQLQ-QVFGMAEGLVNYTRLDDPA 347 (527)
T ss_pred cHHHHHHHHhCccccC------C---CccceEEEEEcCCCCCHHHHHHHHHHhC--CeEE-eeeccCccCccccCCCCcc
Confidence 5666666554433221 1 1223788888884 345566777675 7888 99999997543211 100
Q ss_pred -CCCCCCceeeecCceEEEEeeCCCCCCCCCCCCCCCCcccccCCCCCeEEEEEee---ccceec--------------c
Q 007532 352 -CRPSEVSYTIMPNMAYFEFLPQEPSDSFGLTSSDPQPVDLVDVEMGKEYELVITT---YAGLYR--------------Y 413 (599)
Q Consensus 352 -~~~~~~~~~l~~~~~ffEFip~~~~~~~~~~~~~~~~l~~~ev~~G~~YelviTt---~~GLyR--------------Y 413 (599)
......+..+-+. ...+.++.+ ...+++|+.+||+++. ..|+|. |
T Consensus 348 ~~~~~~~G~~~~~~-~~v~i~d~~----------------g~~~~~g~~Gei~v~g~~~~~gY~~~~~~~~~~~~~dg~~ 410 (527)
T TIGR02275 348 EIIFTTQGRPMSPD-DEVRVVDDH----------------GNPVAPGETGMLLTRGPYTFRGYYKAPEHNAAAFDAEGFY 410 (527)
T ss_pred ccccccCCCCCCCC-ceEEEECCC----------------CCCCCCCCceEEEecCCccchhhcCChhHhHhhcCcCCCE
Confidence 0001122222111 123333321 1235689999999974 355553 9
Q ss_pred ccCCEEEEeeccCCCCEEEEEeecCceeeccccccCHHHHHHHHHH
Q 007532 414 RVGDILRVIGFHNSAPQFHFVRRKNVLLSIESDKTDEAELQNAIDN 459 (599)
Q Consensus 414 r~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~GEk~~e~~v~~av~~ 459 (599)
+|||+++++. ...+.|+||.+++++++|+++++.+|+++|.+
T Consensus 411 ~TGDl~~~~~----~g~l~~~gR~~d~i~~~G~~v~~~eiE~~l~~ 452 (527)
T TIGR02275 411 YTGDLVRLTP----EGYIVVVGRAKDQINRGGEKIAAEEIENLLLA 452 (527)
T ss_pred EcCceEEEcC----CccEEEEecccceeecCCEEECHHHHHHHHHh
Confidence 9999999973 55788999999999999999999999999965
No 42
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=99.20 E-value=3.1e-09 Score=119.15 Aligned_cols=127 Identities=10% Similarity=0.142 Sum_probs=85.0
Q ss_pred eEEEEecch---hhhHHHHHHHhCCCCCcccccccccccc-ccccCCCCC----CCCCCceeeecCceEEEEeeCCCCCC
Q 007532 307 LDVIVTGAM---AQYIPTLDYYSGGKLPMACTMYASSECY-FGLNLNPIC----RPSEVSYTIMPNMAYFEFLPQEPSDS 378 (599)
Q Consensus 307 l~~~~~g~~---~~y~~~l~~~~g~~~~~~~~~Y~asEg~-i~i~~~~~~----~~~~~~~~l~~~~~ffEFip~~~~~~ 378 (599)
++++++||. ...+.++++.++ ++++ +.||+||+. ++.. .+.. .....+. ..|+. -++.++.+.
T Consensus 312 l~~~~~gG~~~~~~~~~~~~~~~~--~~~~-~~YG~tE~~~~~~~-~~~~~~~~~~~~~G~-~~~g~-~v~i~~~~~--- 382 (538)
T TIGR03208 312 LFTFLCAGAPIPGILVERAWELLG--ALIV-SAWGMTENGAVTVT-EPDDALEKASTTDGR-PLPGV-EVKVIDANG--- 382 (538)
T ss_pred ceEEEEcCCCCCHHHHHHHHHHcC--CeEE-eeeccCcCCCcccc-CcccchhhccCcccc-cCCCC-EEEEECCCC---
Confidence 667777774 344556666665 7888 999999973 2221 1100 0001122 22322 334443221
Q ss_pred CCCCCCCCCCcccccCCCCCeEEEEEeec---cceec------------cccCCEEEEeeccCCCCEEEEEeecCceeec
Q 007532 379 FGLTSSDPQPVDLVDVEMGKEYELVITTY---AGLYR------------YRVGDILRVIGFHNSAPQFHFVRRKNVLLSI 443 (599)
Q Consensus 379 ~~~~~~~~~~l~~~ev~~G~~YelviTt~---~GLyR------------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~ 443 (599)
.++..|+.|||+|+.. .|+|. |+|||+++++. ...+.|+||.++++++
T Consensus 383 -------------~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~TGD~~~~~~----~g~l~~~gR~~~~i~~ 445 (538)
T TIGR03208 383 -------------AKLSQGETGRLLVRGCSNFGGYLKRPHLNSTDAEGWFDTGDLAFQDA----EGYIRINGRSKDVIIR 445 (538)
T ss_pred -------------CCCcCCCCcEEEEecCcccccccCCcccccccCCCceeccceEEECC----CCcEEEEeccCceEEE
Confidence 2357899999999763 56653 99999999973 4579999999999999
Q ss_pred cccccCHHHHHHHHHH
Q 007532 444 ESDKTDEAELQNAIDN 459 (599)
Q Consensus 444 ~GEk~~e~~v~~av~~ 459 (599)
.|+++.+.+|+++|.+
T Consensus 446 ~G~~v~p~eIE~~l~~ 461 (538)
T TIGR03208 446 GGENIPVVEIENLLYQ 461 (538)
T ss_pred CCEEECHHHHHHHHhc
Confidence 9999999999999965
No 43
>PRK05852 acyl-CoA synthetase; Validated
Probab=99.20 E-value=2.8e-09 Score=119.41 Aligned_cols=153 Identities=13% Similarity=0.130 Sum_probs=97.8
Q ss_pred CHHHHHHHHHHhccccccccccccCCCCceeEEEEecch---hhhHHHHHHHhCCCCCccccccccccccccccCCCC--
Q 007532 277 NTELAEFIRMECSKENWERIITRIWPNTKYLDVIVTGAM---AQYIPTLDYYSGGKLPMACTMYASSECYFGLNLNPI-- 351 (599)
Q Consensus 277 ~p~~A~~L~~~~~~~~~~g~~~~lWP~l~~l~~~~~g~~---~~y~~~l~~~~g~~~~~~~~~Y~asEg~i~i~~~~~-- 351 (599)
.|..+..|.+..... ....-++. ++.+.+||. ...++.+++.++ ++++ +.||+||+...+...+.
T Consensus 274 ~P~~~~~l~~~~~~~----~~~~~~~~---lr~i~~~G~~~~~~~~~~~~~~~~--~~v~-~~YG~tE~~~~~~~~~~~~ 343 (534)
T PRK05852 274 VPTIHQILLERAATE----PSGRKPAA---LRFIRSCSAPLTAETAQALQTEFA--APVV-CAFGMTEATHQVTTTQIEG 343 (534)
T ss_pred ChHHHHHHHhhcccc----cccccCCC---eeEEEECCCCCCHHHHHHHHHHhC--CChh-hccCccccchhhhcCCccc
Confidence 677777766543221 01122445 778877774 345677777786 7888 89999997432211110
Q ss_pred --C---CCCCCceeeecCceEEEEeeCCCCCCCCCCCCCCCCcccccCCCCCeEEEEEeec---cceec-----------
Q 007532 352 --C---RPSEVSYTIMPNMAYFEFLPQEPSDSFGLTSSDPQPVDLVDVEMGKEYELVITTY---AGLYR----------- 412 (599)
Q Consensus 352 --~---~~~~~~~~l~~~~~ffEFip~~~~~~~~~~~~~~~~l~~~ev~~G~~YelviTt~---~GLyR----------- 412 (599)
+ +....+.+-.+...-.+.++++. .++.+|+.+||+|+.. .|+|+
T Consensus 344 ~~~~~~~~~~~g~~g~~~g~~~~i~d~~g----------------~~~~~g~~Gel~v~g~~v~~gY~~~~~~t~~~~~~ 407 (534)
T PRK05852 344 IGQTENPVVSTGLVGRSTGAQIRIVGSDG----------------LPLPAGAVGEVWLRGTTVVRGYLGDPTITAANFTD 407 (534)
T ss_pred cccccCcccccccCCCCCCCeEEEECCCC----------------CCCCCCCceEEEEecCcccchhcCCcccchhhhcC
Confidence 0 00011221001122344454321 2457899999999763 55554
Q ss_pred --cccCCEEEEeeccCCCCEEEEEeecCceeeccccccCHHHHHHHHHH
Q 007532 413 --YRVGDILRVIGFHNSAPQFHFVRRKNVLLSIESDKTDEAELQNAIDN 459 (599)
Q Consensus 413 --Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~GEk~~e~~v~~av~~ 459 (599)
|+|||+++++. ...+.|+||.++++++.|+++++.+|+++|.+
T Consensus 408 g~~~TGD~~~~d~----dG~l~~~gR~~d~i~~~G~~v~~~~iE~~l~~ 452 (534)
T PRK05852 408 GWLRTGDLGSLSA----AGDLSIRGRIKELINRGGEKISPERVEGVLAS 452 (534)
T ss_pred CCcccCceEEEeC----CCcEEEEecchhhEEECCEEECHHHHHHHHHh
Confidence 89999999973 45799999999999999999999999999965
No 44
>PRK10946 entE enterobactin synthase subunit E; Provisional
Probab=99.20 E-value=6.1e-10 Score=124.97 Aligned_cols=128 Identities=13% Similarity=0.172 Sum_probs=85.2
Q ss_pred eEEEEecch---hhhHHHHHHHhCCCCCccccccccccccccccCCCCCC----CCCCceeeecCceEEEEeeCCCCCCC
Q 007532 307 LDVIVTGAM---AQYIPTLDYYSGGKLPMACTMYASSECYFGLNLNPICR----PSEVSYTIMPNMAYFEFLPQEPSDSF 379 (599)
Q Consensus 307 l~~~~~g~~---~~y~~~l~~~~g~~~~~~~~~Y~asEg~i~i~~~~~~~----~~~~~~~l~~~~~ffEFip~~~~~~~ 379 (599)
++++.+||. ....+++.+.++ ++++ +.||.||+.+.... ...+ ....+..+.|+. ..+.++.+
T Consensus 302 l~~v~~gg~~l~~~~~~~~~~~~g--~~~~-~~YG~tE~~~~~~~-~~~~~~~~~~~~G~p~~~~~-~v~i~d~~----- 371 (536)
T PRK10946 302 LKLLQVGGARLSETLARRIPAELG--CQLQ-QVFGMAEGLVNYTR-LDDSDERIFTTQGRPMSPDD-EVWVADAD----- 371 (536)
T ss_pred eeEEEECCCCCCHHHHHHHHHhcC--CeEE-Eeecccccceeeec-CCCccccccccCCcccCCCc-eEEEECCC-----
Confidence 778888884 344566666665 7888 99999998654321 0100 001121111211 12222211
Q ss_pred CCCCCCCCCcccccCCCCCeEEEEEee---ccceec--------------cccCCEEEEeeccCCCCEEEEEeecCceee
Q 007532 380 GLTSSDPQPVDLVDVEMGKEYELVITT---YAGLYR--------------YRVGDILRVIGFHNSAPQFHFVRRKNVLLS 442 (599)
Q Consensus 380 ~~~~~~~~~l~~~ev~~G~~YelviTt---~~GLyR--------------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~ 442 (599)
..++..|+.+||+|+. ..|+|. |+|||+++.+. ...+.|+||.+++++
T Consensus 372 -----------~~~~~~g~~Gel~v~g~~~~~GY~~~~~~t~~~~~~d~~~~TGDl~~~d~----~G~l~~~gR~~d~i~ 436 (536)
T PRK10946 372 -----------GNPLPQGEVGRLMTRGPYTFRGYYKSPQHNASAFDANGFYCSGDLVSIDP----DGYITVVGREKDQIN 436 (536)
T ss_pred -----------CCCCCCCCccEEEEecCccchhhcCCcccchhhcccCCceecCceEEECC----CCcEEEeccccceee
Confidence 2346789999999974 355552 99999999973 357999999999999
Q ss_pred ccccccCHHHHHHHHHH
Q 007532 443 IESDKTDEAELQNAIDN 459 (599)
Q Consensus 443 ~~GEk~~e~~v~~av~~ 459 (599)
+.|+++++.+|+.+|.+
T Consensus 437 ~~G~~v~~~eiE~~l~~ 453 (536)
T PRK10946 437 RGGEKIAAEEIENLLLR 453 (536)
T ss_pred cCCEEEcHHHHHHHHHh
Confidence 99999999999999965
No 45
>PRK07638 acyl-CoA synthetase; Validated
Probab=99.18 E-value=1.8e-09 Score=119.33 Aligned_cols=129 Identities=16% Similarity=0.148 Sum_probs=87.4
Q ss_pred eEEEEecch--hhhHHHHHHHhCCCCCccccccccccccccccCCCCC---CCCCCceeeecCceEEEEeeCCCCCCCCC
Q 007532 307 LDVIVTGAM--AQYIPTLDYYSGGKLPMACTMYASSECYFGLNLNPIC---RPSEVSYTIMPNMAYFEFLPQEPSDSFGL 381 (599)
Q Consensus 307 l~~~~~g~~--~~y~~~l~~~~g~~~~~~~~~Y~asEg~i~i~~~~~~---~~~~~~~~l~~~~~ffEFip~~~~~~~~~ 381 (599)
+..+.+|+. .....+++..+++ ++++ +.||+||+.......+.. .+...+.. +|+ ..++.++.+.
T Consensus 256 ~~~~~~G~~l~~~~~~~~~~~~~~-~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~G~~-~~~-~~~~i~d~~g------ 325 (487)
T PRK07638 256 MKIISSGAKWEAEAKEKIKNIFPY-AKLY-EFYGASELSFVTALVDEESERRPNSVGRP-FHN-VQVRICNEAG------ 325 (487)
T ss_pred eEEEEcCCCCCHHHHHHHHHHcCC-CeEE-EEecCCccCceEEecccccCCCCCCCCcc-cCC-cEEEEECCCC------
Confidence 455555552 3556777787876 8888 899999985322111111 11112221 222 3455554321
Q ss_pred CCCCCCCcccccCCCCCeEEEEEeec---cceec-------------cccCCEEEEeeccCCCCEEEEEeecCceeeccc
Q 007532 382 TSSDPQPVDLVDVEMGKEYELVITTY---AGLYR-------------YRVGDILRVIGFHNSAPQFHFVRRKNVLLSIES 445 (599)
Q Consensus 382 ~~~~~~~l~~~ev~~G~~YelviTt~---~GLyR-------------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~G 445 (599)
.++++|+.|||+|++. .|+|. |+|||++++.. ...+.|+||.+|++++.|
T Consensus 326 ----------~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGDl~~~d~----~g~l~i~GR~~d~i~~~G 391 (487)
T PRK07638 326 ----------EEVQKGEIGTVYVKSPQFFMGYIIGGVLARELNADGWMTVRDVGYEDE----EGFIYIVGREKNMILFGG 391 (487)
T ss_pred ----------CCCCCCCCeEEEEecccceeeecCCHHHHhhhccCCcEecCccEeEcC----CCeEEEEecCCCeEEeCC
Confidence 2467899999999763 45553 68999998873 568999999999999999
Q ss_pred cccCHHHHHHHHHH
Q 007532 446 DKTDEAELQNAIDN 459 (599)
Q Consensus 446 Ek~~e~~v~~av~~ 459 (599)
+++++.+|+++|.+
T Consensus 392 ~~v~~~eiE~~l~~ 405 (487)
T PRK07638 392 INIFPEEIESVLHE 405 (487)
T ss_pred EEECHHHHHHHHHh
Confidence 99999999999965
No 46
>PRK07867 acyl-CoA synthetase; Validated
Probab=99.18 E-value=8e-09 Score=115.96 Aligned_cols=127 Identities=15% Similarity=0.205 Sum_probs=82.3
Q ss_pred eEEEEecc-hhhhHHHHHHHhCCCCCccccccccccccccccCCCCCCCCCCceeeecCceEEEEeeCCCCCCCCCCCCC
Q 007532 307 LDVIVTGA-MAQYIPTLDYYSGGKLPMACTMYASSECYFGLNLNPICRPSEVSYTIMPNMAYFEFLPQEPSDSFGLTSSD 385 (599)
Q Consensus 307 l~~~~~g~-~~~y~~~l~~~~g~~~~~~~~~Y~asEg~i~i~~~~~~~~~~~~~~l~~~~~ffEFip~~~~~~~~~~~~~ 385 (599)
++++.+|. ..+-..++.+.+| ++++ +.||+||+.+.+...+..++...+.. .++ ++.+.++...
T Consensus 269 lr~~~gg~~~~~~~~~~~~~~g--~~l~-~~YG~TE~~~~~~~~~~~~~~~~g~~-~~~---~~i~~~~~~~-------- 333 (529)
T PRK07867 269 LRIVYGNEGAPGDIARFARRFG--CVVV-DGFGSTEGGVAITRTPDTPPGALGPL-PPG---VAIVDPDTGT-------- 333 (529)
T ss_pred eEEEecCCCChHHHHHHHHHhC--CcEE-EeecccccccccccCCCCCCCCcCCC-CCC---EEEEECCCCC--------
Confidence 55544333 2333456666675 7888 99999998543322221111122221 222 5666543221
Q ss_pred CCCcccccCCCCC------------eEEEEE-ee---cccee-------------ccccCCEEEEeeccCCCCEEEEEee
Q 007532 386 PQPVDLVDVEMGK------------EYELVI-TT---YAGLY-------------RYRVGDILRVIGFHNSAPQFHFVRR 436 (599)
Q Consensus 386 ~~~l~~~ev~~G~------------~Yelvi-Tt---~~GLy-------------RYr~GDvV~v~gf~~~~P~i~f~gR 436 (599)
++.+|+ .|||++ .. ..|+| +|+|||++++.. ...+.|+||
T Consensus 334 -------~~~~g~~~~~~~~~~~~~~Gel~i~~g~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~----~g~l~~~GR 402 (529)
T PRK07867 334 -------ECPPAEDADGRLLNADEAIGELVNTAGPGGFEGYYNDPEADAERMRGGVYWSGDLAYRDA----DGYAYFAGR 402 (529)
T ss_pred -------CCCCCccccccccccCCcceEEEEecCCcccccccCChHhhhhhhcCCeEeeccEEEEeC----CCcEEEecc
Confidence 122333 899998 32 35665 699999999873 457999999
Q ss_pred cCceeeccccccCHHHHHHHHHH
Q 007532 437 KNVLLSIESDKTDEAELQNAIDN 459 (599)
Q Consensus 437 ~~~~l~~~GEk~~e~~v~~av~~ 459 (599)
.+|+++++|+|+++.+|+++|.+
T Consensus 403 ~~d~i~~~G~~v~p~eIE~~l~~ 425 (529)
T PRK07867 403 LGDWMRVDGENLGTAPIERILLR 425 (529)
T ss_pred ccCeEEECCEEeCHHHHHHHHHh
Confidence 99999999999999999999975
No 47
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated
Probab=99.18 E-value=4e-10 Score=126.86 Aligned_cols=129 Identities=19% Similarity=0.247 Sum_probs=86.3
Q ss_pred eeEEEEecch---hhhHHHHHHHhCCCCCccccccccccccccccCCCCC---CCCCCceeeecCceEEEEeeCCCCCCC
Q 007532 306 YLDVIVTGAM---AQYIPTLDYYSGGKLPMACTMYASSECYFGLNLNPIC---RPSEVSYTIMPNMAYFEFLPQEPSDSF 379 (599)
Q Consensus 306 ~l~~~~~g~~---~~y~~~l~~~~g~~~~~~~~~Y~asEg~i~i~~~~~~---~~~~~~~~l~~~~~ffEFip~~~~~~~ 379 (599)
.++++.+||. ...++++++.++ ++++ ..||+||+...+...+.. .+...+.. .++ .-.+.++.+.
T Consensus 328 ~l~~~~~gg~~~~~~~~~~~~~~~~--~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~vG~p-~~g-~~v~i~d~~~---- 398 (557)
T PRK07059 328 KLIVANGGGMAVQRPVAERWLEMTG--CPIT-EGYGLSETSPVATCNPVDATEFSGTIGLP-LPS-TEVSIRDDDG---- 398 (557)
T ss_pred hheEEEeccccCCHHHHHHHHHHhC--CCee-eccccccccchhhcCCCCCCCcCCcccCc-cCC-cEEEEECCCC----
Confidence 3677778874 345566677675 7888 999999984322111110 11122221 122 2344444221
Q ss_pred CCCCCCCCCcccccCCCCCeEEEEEeec---cceec--------------cccCCEEEEeeccCCCCEEEEEeecCceee
Q 007532 380 GLTSSDPQPVDLVDVEMGKEYELVITTY---AGLYR--------------YRVGDILRVIGFHNSAPQFHFVRRKNVLLS 442 (599)
Q Consensus 380 ~~~~~~~~~l~~~ev~~G~~YelviTt~---~GLyR--------------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~ 442 (599)
..+.+|+.|||++++. .|+|. |+|||+++... ...+.|+||.+++++
T Consensus 399 ------------~~~~~g~~Gel~v~g~~~~~gY~~~~~~~~~~~~~~g~~~TGDl~~~~~----~g~~~~~GR~~~~i~ 462 (557)
T PRK07059 399 ------------NDLPLGEPGEICIRGPQVMAGYWNRPDETAKVMTADGFFRTGDVGVMDE----RGYTKIVDRKKDMIL 462 (557)
T ss_pred ------------CCCCCCCceEEEEeCCccchhhhcCHHHHhhhcccCCceecCcEEEEcC----CCcEEEecccccceE
Confidence 1357899999999862 33332 89999999873 457999999999999
Q ss_pred ccccccCHHHHHHHHHH
Q 007532 443 IESDKTDEAELQNAIDN 459 (599)
Q Consensus 443 ~~GEk~~e~~v~~av~~ 459 (599)
+.|+++++.+|+++|.+
T Consensus 463 ~~G~~i~p~~iE~~l~~ 479 (557)
T PRK07059 463 VSGFNVYPNEIEEVVAS 479 (557)
T ss_pred ECCEEEcHHHHHHHHHh
Confidence 99999999999999965
No 48
>PRK08974 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.18 E-value=2.2e-09 Score=120.94 Aligned_cols=128 Identities=18% Similarity=0.269 Sum_probs=86.9
Q ss_pred eEEEEecch---hhhHHHHHHHhCCCCCccccccccccccccccCCCC---CCCCCCceeeecCceEEEEeeCCCCCCCC
Q 007532 307 LDVIVTGAM---AQYIPTLDYYSGGKLPMACTMYASSECYFGLNLNPI---CRPSEVSYTIMPNMAYFEFLPQEPSDSFG 380 (599)
Q Consensus 307 l~~~~~g~~---~~y~~~l~~~~g~~~~~~~~~Y~asEg~i~i~~~~~---~~~~~~~~~l~~~~~ffEFip~~~~~~~~ 380 (599)
++++++||. ...++.+++.+| ++++ +.||+||+...+..... ..+...++. .|+ .-.+.++++.
T Consensus 327 lr~~~~gg~~~~~~~~~~~~~~~g--~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~G~~-~~~-~~~~i~~~~~----- 396 (560)
T PRK08974 327 LKLSVGGGMAVQQAVAERWVKLTG--QYLL-EGYGLTECSPLVSVNPYDLDYYSGSIGLP-VPS-TEIKLVDDDG----- 396 (560)
T ss_pred eeEEEecCccCCHHHHHHHHHHhC--CcEE-eeecccccCceeeccCCCCcccCCccccC-cCC-CEEEEECCCC-----
Confidence 778888884 234566667665 7888 89999997432211110 001112221 222 2345554321
Q ss_pred CCCCCCCCcccccCCCCCeEEEEEee---ccceec-------------cccCCEEEEeeccCCCCEEEEEeecCceeecc
Q 007532 381 LTSSDPQPVDLVDVEMGKEYELVITT---YAGLYR-------------YRVGDILRVIGFHNSAPQFHFVRRKNVLLSIE 444 (599)
Q Consensus 381 ~~~~~~~~l~~~ev~~G~~YelviTt---~~GLyR-------------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~ 444 (599)
.++..|+.|||+|+. ..|+|. |+|||+++++. ...+.|+||.++++++.
T Consensus 397 -----------~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~g~~~TGDl~~~~~----~g~l~i~GR~~d~i~~~ 461 (560)
T PRK08974 397 -----------NEVPPGEPGELWVKGPQVMLGYWQRPEATDEVIKDGWLATGDIAVMDE----EGFLRIVDRKKDMILVS 461 (560)
T ss_pred -----------CCCCCCCceEEEEecCCcchhhcCChhhhhhhhhcCCcccCCEEEEcC----CceEEEEecccceEEeC
Confidence 246789999999975 355553 99999999863 45799999999999999
Q ss_pred ccccCHHHHHHHHHH
Q 007532 445 SDKTDEAELQNAIDN 459 (599)
Q Consensus 445 GEk~~e~~v~~av~~ 459 (599)
|+++++.+|+++|.+
T Consensus 462 G~~i~~~~IE~~l~~ 476 (560)
T PRK08974 462 GFNVYPNEIEDVVML 476 (560)
T ss_pred CEEECHHHHHHHHHh
Confidence 999999999999965
No 49
>PRK08316 acyl-CoA synthetase; Validated
Probab=99.18 E-value=6.2e-10 Score=123.61 Aligned_cols=130 Identities=20% Similarity=0.230 Sum_probs=85.1
Q ss_pred eeEEEEecch---hhhHHHHHHHhCCCCCcccccccccccc-ccccCCCC---CCCCCCceeeecCceEEEEeeCCCCCC
Q 007532 306 YLDVIVTGAM---AQYIPTLDYYSGGKLPMACTMYASSECY-FGLNLNPI---CRPSEVSYTIMPNMAYFEFLPQEPSDS 378 (599)
Q Consensus 306 ~l~~~~~g~~---~~y~~~l~~~~g~~~~~~~~~Y~asEg~-i~i~~~~~---~~~~~~~~~l~~~~~ffEFip~~~~~~ 378 (599)
.++.+.+||. ....+.+++.+++ ++++ +.||+||+. ++....+. ......+.. .++. -...++++
T Consensus 287 ~l~~~~~gg~~~~~~~~~~~~~~~~~-~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~-~~~~-~~~i~~~~---- 358 (523)
T PRK08316 287 SLRKGYYGASIMPVEVLKELRERLPG-LRFY-NCYGQTEIAPLATVLGPEEHLRRPGSAGRP-VLNV-ETRVVDDD---- 358 (523)
T ss_pred cceEEEEcCCcCCHHHHHHHHHHcCC-Ccee-eeecccccCccccccCccccccccCCcccC-CCCc-EEEEEcCC----
Confidence 3667777763 3456777887766 8888 999999973 22211110 000011111 1111 12222221
Q ss_pred CCCCCCCCCCcccccCCCCCeEEEEEeec---ccee-------------ccccCCEEEEeeccCCCCEEEEEeecCceee
Q 007532 379 FGLTSSDPQPVDLVDVEMGKEYELVITTY---AGLY-------------RYRVGDILRVIGFHNSAPQFHFVRRKNVLLS 442 (599)
Q Consensus 379 ~~~~~~~~~~l~~~ev~~G~~YelviTt~---~GLy-------------RYr~GDvV~v~gf~~~~P~i~f~gR~~~~l~ 442 (599)
..++..|+.|||++++. .|+| .|+|||++++.. ...+.|+||.+++++
T Consensus 359 ------------~~~~~~g~~Gei~v~~~~~~~~y~~~~~~~~~~~~~~~~~TGDl~~~~~----~g~l~i~gR~~~~i~ 422 (523)
T PRK08316 359 ------------GNDVAPGEVGEIVHRSPQLMLGYWDDPEKTAEAFRGGWFHSGDLGVMDE----EGYITVVDRKKDMIK 422 (523)
T ss_pred ------------CCCCCCCCcceEEEECCchhhhhcCCHHHHHHHhhCCCeeccceEEEcC----CceEEEecccccEEE
Confidence 12356799999999863 4455 299999999973 467999999999999
Q ss_pred ccccccCHHHHHHHHHH
Q 007532 443 IESDKTDEAELQNAIDN 459 (599)
Q Consensus 443 ~~GEk~~e~~v~~av~~ 459 (599)
+.|+++++.+|+++|.+
T Consensus 423 ~~G~~i~~~~iE~~l~~ 439 (523)
T PRK08316 423 TGGENVASREVEEALYT 439 (523)
T ss_pred eCCeEECHHHHHHHHHh
Confidence 99999999999999965
No 50
>PLN02246 4-coumarate--CoA ligase
Probab=99.18 E-value=5.5e-09 Score=117.12 Aligned_cols=131 Identities=15% Similarity=0.157 Sum_probs=86.1
Q ss_pred eeEEEEecch---hhhHHHHHHHhCCCCCcccccccccccccc--ccCCCC-----CCCCCCceeeecCceEEEEeeCCC
Q 007532 306 YLDVIVTGAM---AQYIPTLDYYSGGKLPMACTMYASSECYFG--LNLNPI-----CRPSEVSYTIMPNMAYFEFLPQEP 375 (599)
Q Consensus 306 ~l~~~~~g~~---~~y~~~l~~~~g~~~~~~~~~Y~asEg~i~--i~~~~~-----~~~~~~~~~l~~~~~ffEFip~~~ 375 (599)
.++.++.||. ....+.+++.+++ +++. ..||+||+... .+.... ..+...+.. .++ .-.+.++++.
T Consensus 299 ~lr~~~~gg~~l~~~~~~~~~~~~~~-~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~-~~~-~~~~i~d~~~ 374 (537)
T PLN02246 299 SIRMVLSGAAPLGKELEDAFRAKLPN-AVLG-QGYGMTEAGPVLAMCLAFAKEPFPVKSGSCGTV-VRN-AELKIVDPET 374 (537)
T ss_pred ceeEEEEecCcCCHHHHHHHHHHcCC-CeEe-ccccccccCcccccccccCCCCccccCCccccc-cCC-cEEEEecCCC
Confidence 3778888875 3455677777766 7777 89999998422 111000 001111211 121 1233333221
Q ss_pred CCCCCCCCCCCCCcccccCCCCCeEEEEEee---cccee--------------ccccCCEEEEeeccCCCCEEEEEeecC
Q 007532 376 SDSFGLTSSDPQPVDLVDVEMGKEYELVITT---YAGLY--------------RYRVGDILRVIGFHNSAPQFHFVRRKN 438 (599)
Q Consensus 376 ~~~~~~~~~~~~~l~~~ev~~G~~YelviTt---~~GLy--------------RYr~GDvV~v~gf~~~~P~i~f~gR~~ 438 (599)
..++..|+.|||+|+. ..|+| -|+|||++++.. ...+.|+||.+
T Consensus 375 ---------------~~~~~~g~~Gel~v~g~~~~~GY~~~~~~~~~~~~~~~~~~TGD~~~~~~----~g~l~~~GR~d 435 (537)
T PLN02246 375 ---------------GASLPRNQPGEICIRGPQIMKGYLNDPEATANTIDKDGWLHTGDIGYIDD----DDELFIVDRLK 435 (537)
T ss_pred ---------------CCcCCCCCceEEEEECCchhccccCCchhhhhcccCCCCeeecceEEEeC----CCeEEEEeccc
Confidence 1246789999999974 34554 278999999873 44799999999
Q ss_pred ceeeccccccCHHHHHHHHHH
Q 007532 439 VLLSIESDKTDEAELQNAIDN 459 (599)
Q Consensus 439 ~~l~~~GEk~~e~~v~~av~~ 459 (599)
+++++.|+++++.+|+++|.+
T Consensus 436 d~i~~~G~~i~~~eIE~~l~~ 456 (537)
T PLN02246 436 ELIKYKGFQVAPAELEALLIS 456 (537)
T ss_pred ceEEECCEEECcHHHHHHHHh
Confidence 999999999999999999965
No 51
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.18 E-value=6.6e-10 Score=124.80 Aligned_cols=129 Identities=18% Similarity=0.214 Sum_probs=89.2
Q ss_pred eEEEEecch---hhhHHHHHHHhCCCCCccccccccccccc-cccCCCCC---CCCCCceeeecCceEEEEeeCCCCCCC
Q 007532 307 LDVIVTGAM---AQYIPTLDYYSGGKLPMACTMYASSECYF-GLNLNPIC---RPSEVSYTIMPNMAYFEFLPQEPSDSF 379 (599)
Q Consensus 307 l~~~~~g~~---~~y~~~l~~~~g~~~~~~~~~Y~asEg~i-~i~~~~~~---~~~~~~~~l~~~~~ffEFip~~~~~~~ 379 (599)
++++.+||. ...++.+++.+++ ++++ +.||+||+.. +....... .....+.. .|+ ...+.++.+.
T Consensus 292 lr~i~~gg~~~~~~~~~~~~~~~~~-~~l~-~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~-~~~-~~~~i~d~~~---- 363 (542)
T PRK07786 292 LRVLSWGAAPASDTLLRQMAATFPE-AQIL-AAFGQTEMSPVTCMLLGEDAIRKLGSVGKV-IPT-VAARVVDENM---- 363 (542)
T ss_pred eEEEEECCCCCCHHHHHHHHHHcCC-CeEE-eeecccccccceEecCcccccccCCCcccc-CCC-ceEEEECCCC----
Confidence 778888874 3566778888866 8888 9999999842 21111100 00112221 222 3455555321
Q ss_pred CCCCCCCCCcccccCCCCCeEEEEEee---ccceec-------------cccCCEEEEeeccCCCCEEEEEeecCceeec
Q 007532 380 GLTSSDPQPVDLVDVEMGKEYELVITT---YAGLYR-------------YRVGDILRVIGFHNSAPQFHFVRRKNVLLSI 443 (599)
Q Consensus 380 ~~~~~~~~~l~~~ev~~G~~YelviTt---~~GLyR-------------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~ 443 (599)
.++.+|+.|||++.. ..|+|+ |+|||+++... ...+.++||.++++++
T Consensus 364 ------------~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~f~~~~~~TGDl~~~~~----~g~~~i~GR~~d~i~~ 427 (542)
T PRK07786 364 ------------NDVPVGEVGEIVYRAPTLMSGYWNNPEATAEAFAGGWFHSGDLVRQDE----EGYVWVVDRKKDMIIS 427 (542)
T ss_pred ------------CCCcCCCceEEEEEChhhhhhhcCCHHHHHHHhhCCcccccceEEEcC----CceEEEEecccceEEe
Confidence 135789999999965 356664 99999999873 4579999999999999
Q ss_pred cccccCHHHHHHHHHH
Q 007532 444 ESDKTDEAELQNAIDN 459 (599)
Q Consensus 444 ~GEk~~e~~v~~av~~ 459 (599)
.|+++++.+|+++|.+
T Consensus 428 ~G~~v~~~eiE~~l~~ 443 (542)
T PRK07786 428 GGENIYCAEVENVLAS 443 (542)
T ss_pred CCEEECHHHHHHHHHh
Confidence 9999999999999965
No 52
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.18 E-value=1.9e-09 Score=131.40 Aligned_cols=130 Identities=16% Similarity=0.245 Sum_probs=88.2
Q ss_pred eEEEEecch---hhhHHHHHHHhCCCCCccccccccccccc--cccCCCC----------CCCCCCceeeecCceEEEEe
Q 007532 307 LDVIVTGAM---AQYIPTLDYYSGGKLPMACTMYASSECYF--GLNLNPI----------CRPSEVSYTIMPNMAYFEFL 371 (599)
Q Consensus 307 l~~~~~g~~---~~y~~~l~~~~g~~~~~~~~~Y~asEg~i--~i~~~~~----------~~~~~~~~~l~~~~~ffEFi 371 (599)
++.+.+||. ...++.+++.+| ++++ +.||+||+.. ..+.... +.+...+. ..|+. -.+.+
T Consensus 900 lr~~~~gg~~~~~~~~~~~~~~~g--~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~-p~~~~-~v~i~ 974 (1146)
T PRK08633 900 LRLVVAGAEKLKPEVADAFEEKFG--IRIL-EGYGATETSPVASVNLPDVLAADFKRQTGSKEGSVGM-PLPGV-AVRIV 974 (1146)
T ss_pred eeeEEEcCCcCCHHHHHHHHHHhC--CCee-cccccccCcceEEEecCcccccccccccCCCCCCccc-cCCCC-EEEEE
Confidence 778888884 355677777775 7888 9999999732 2211100 00111121 12222 23444
Q ss_pred eCCCCCCCCCCCCCCCCcccccCCCCCeEEEEEee---cccee-----------------ccccCCEEEEeeccCCCCEE
Q 007532 372 PQEPSDSFGLTSSDPQPVDLVDVEMGKEYELVITT---YAGLY-----------------RYRVGDILRVIGFHNSAPQF 431 (599)
Q Consensus 372 p~~~~~~~~~~~~~~~~l~~~ev~~G~~YelviTt---~~GLy-----------------RYr~GDvV~v~gf~~~~P~i 431 (599)
++++. .++.+|+.|||+|+. ..|+| .|+|||+++++. ...+
T Consensus 975 d~~~~---------------~~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~~~~~~~~~~~~TGD~~~~~~----~g~l 1035 (1146)
T PRK08633 975 DPETF---------------EELPPGEDGLILIGGPQVMKGYLGDPEKTAEVIKDIDGIGWYVTGDKGHLDE----DGFL 1035 (1146)
T ss_pred cCCCC---------------ccCCCCCceEEEEcCCCccccccCCccchHHHhhcCCCCCeEECCCEEEEcC----CceE
Confidence 43221 246789999999975 34554 289999999983 5689
Q ss_pred EEEeecCceeeccccccCHHHHHHHHHHH
Q 007532 432 HFVRRKNVLLSIESDKTDEAELQNAIDNA 460 (599)
Q Consensus 432 ~f~gR~~~~l~~~GEk~~e~~v~~av~~a 460 (599)
.|+||.+|+++++|+++++.+||++|.+.
T Consensus 1036 ~~~gR~~d~i~~~G~~v~~~eiE~~l~~~ 1064 (1146)
T PRK08633 1036 TITDRYSRFAKIGGEMVPLGAVEEELAKA 1064 (1146)
T ss_pred EEEecccchhhhCcEEECHHHHHHHHHhc
Confidence 99999999999999999999999999763
No 53
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.17 E-value=1e-09 Score=122.92 Aligned_cols=129 Identities=20% Similarity=0.242 Sum_probs=85.5
Q ss_pred eEEEEecch---hhhHHHHHHHhCCCCCccccccccccccccccCCCC-C-CCCCCceeeecCceEEEEeeCCCCCCCCC
Q 007532 307 LDVIVTGAM---AQYIPTLDYYSGGKLPMACTMYASSECYFGLNLNPI-C-RPSEVSYTIMPNMAYFEFLPQEPSDSFGL 381 (599)
Q Consensus 307 l~~~~~g~~---~~y~~~l~~~~g~~~~~~~~~Y~asEg~i~i~~~~~-~-~~~~~~~~l~~~~~ffEFip~~~~~~~~~ 381 (599)
++++++||. ....+.+.+.++ ++++ +.||+||+.......+. . .....+. ..|+.. ...++++.
T Consensus 307 l~~~~~gG~~~~~~~~~~~~~~~~--~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~G~-~~~g~~-~~i~d~~~------ 375 (546)
T PRK08314 307 LRYIGGGGAAMPEAVAERLKELTG--LDYV-EGYGLTETMAQTHSNPPDRPKLQCLGI-PTFGVD-ARVIDPET------ 375 (546)
T ss_pred hheeeeccccCCHHHHHHHHHHcC--CcEE-ecccccccccceecCCCcCCCCCccCc-ccCCeE-EEEEeCCC------
Confidence 677777874 344566666665 7888 99999998432211111 0 0011111 122221 22333221
Q ss_pred CCCCCCCcccccCCCCCeEEEEEee---cccee-----------------ccccCCEEEEeeccCCCCEEEEEeecCcee
Q 007532 382 TSSDPQPVDLVDVEMGKEYELVITT---YAGLY-----------------RYRVGDILRVIGFHNSAPQFHFVRRKNVLL 441 (599)
Q Consensus 382 ~~~~~~~l~~~ev~~G~~YelviTt---~~GLy-----------------RYr~GDvV~v~gf~~~~P~i~f~gR~~~~l 441 (599)
..+|+.|+.+||+|.. ..|+| -|+|||++++.. ...+.++||.+|++
T Consensus 376 ---------~~~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~f~~~~~~~~~~TGDl~~~~~----~g~l~~~GR~~d~i 442 (546)
T PRK08314 376 ---------LEELPPGEVGEIVVHGPQVFKGYWNRPEATAEAFIEIDGKRFFRTGDLGRMDE----EGYFFITDRLKRMI 442 (546)
T ss_pred ---------CcCCCCCCceEEEEECCchhccccCChhHhhhhhhhcCCCceEecCCEEEEcC----CCcEEEEecchhhE
Confidence 1246789999999975 34444 389999999873 46899999999999
Q ss_pred eccccccCHHHHHHHHHH
Q 007532 442 SIESDKTDEAELQNAIDN 459 (599)
Q Consensus 442 ~~~GEk~~e~~v~~av~~ 459 (599)
++.|+++++.+||++|.+
T Consensus 443 ~~~G~~v~~~eIE~~i~~ 460 (546)
T PRK08314 443 NASGFKVWPAEVENLLYK 460 (546)
T ss_pred EeCCEEECHHHHHHHHHh
Confidence 999999999999999976
No 54
>PRK12583 acyl-CoA synthetase; Provisional
Probab=99.17 E-value=9.3e-09 Score=115.47 Aligned_cols=129 Identities=12% Similarity=0.098 Sum_probs=86.3
Q ss_pred eEEEEecch---hhhHHHHHHHhCCCCCccccccccccccccccCCCCCC-----CCCCceeeecCceEEEEeeCCCCCC
Q 007532 307 LDVIVTGAM---AQYIPTLDYYSGGKLPMACTMYASSECYFGLNLNPICR-----PSEVSYTIMPNMAYFEFLPQEPSDS 378 (599)
Q Consensus 307 l~~~~~g~~---~~y~~~l~~~~g~~~~~~~~~Y~asEg~i~i~~~~~~~-----~~~~~~~l~~~~~ffEFip~~~~~~ 378 (599)
|+.+++||. ....+.+.+.+++ .++. ..||+||+.........+. +...|. ..|+ ..++.++++ .
T Consensus 319 lr~i~~~G~~~~~~~~~~~~~~~~~-~~i~-~~YG~tE~~~~~~~~~~~~~~~~~~~~vG~-p~~~-~~~~i~d~~-~-- 391 (558)
T PRK12583 319 LRTGIMAGAPCPIEVMRRVMDEMHM-AEVQ-IAYGMTETSPVSLQTTAADDLERRVETVGR-TQPH-LEVKVVDPD-G-- 391 (558)
T ss_pred heEEEecCCCCCHHHHHHHHHHcCC-ccee-ccccccccccceeccCcccccccccCCCCc-cCCC-CeEEEECCC-C--
Confidence 777777774 3455666666765 5677 8999999843211111100 011222 1222 245555543 1
Q ss_pred CCCCCCCCCCcccccCCCCCeEEEEEeec---ccee--------------ccccCCEEEEeeccCCCCEEEEEeecCcee
Q 007532 379 FGLTSSDPQPVDLVDVEMGKEYELVITTY---AGLY--------------RYRVGDILRVIGFHNSAPQFHFVRRKNVLL 441 (599)
Q Consensus 379 ~~~~~~~~~~l~~~ev~~G~~YelviTt~---~GLy--------------RYr~GDvV~v~gf~~~~P~i~f~gR~~~~l 441 (599)
.++..|+.|||+|++. .|+| .|+|||+++++. ...+.|.||.++++
T Consensus 392 -------------~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~TGDl~~~~~----dg~l~i~GR~~~~i 454 (558)
T PRK12583 392 -------------ATVPRGEIGELCTRGYSVMKGYWNNPEATAESIDEDGWMHTGDLATMDE----QGYVRIVGRSKDMI 454 (558)
T ss_pred -------------CCCCCCCeeEEEEEeCccchhhcCChHHHHhhcCCCCCeeccceEEECC----CccEEEEeccccee
Confidence 2467899999999763 4444 289999999873 45899999999999
Q ss_pred eccccccCHHHHHHHHHH
Q 007532 442 SIESDKTDEAELQNAIDN 459 (599)
Q Consensus 442 ~~~GEk~~e~~v~~av~~ 459 (599)
++.|+++++.+|+++|.+
T Consensus 455 ~~~G~~v~~~~IE~~l~~ 472 (558)
T PRK12583 455 IRGGENIYPREIEEFLFT 472 (558)
T ss_pred EECCEEeCHHHHHHHHHh
Confidence 999999999999999964
No 55
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional
Probab=99.16 E-value=1.2e-08 Score=115.12 Aligned_cols=129 Identities=18% Similarity=0.272 Sum_probs=86.1
Q ss_pred eeEEEEecch---hhhHHHHHHHhCCCCCccccccccccccc-cc-cCCC-CCCCCCCceeeecCceEEEEeeCCCCCCC
Q 007532 306 YLDVIVTGAM---AQYIPTLDYYSGGKLPMACTMYASSECYF-GL-NLNP-ICRPSEVSYTIMPNMAYFEFLPQEPSDSF 379 (599)
Q Consensus 306 ~l~~~~~g~~---~~y~~~l~~~~g~~~~~~~~~Y~asEg~i-~i-~~~~-~~~~~~~~~~l~~~~~ffEFip~~~~~~~ 379 (599)
.++.+.+||. ...++.+++.++ ++++ ..||+||+.. +. +... ...+...+.. .|+.. ++.++++.
T Consensus 334 ~lr~~~~gG~~~~~~~~~~~~~~~~--~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~G~p-~~~~~-v~ivd~~~---- 404 (562)
T PRK12492 334 ALKLTNSGGTALVKATAERWEQLTG--CTIV-EGYGLTETSPVASTNPYGELARLGTVGIP-VPGTA-LKVIDDDG---- 404 (562)
T ss_pred ceeEEEeccccCCHHHHHHHHHHhC--Ccee-eccCccccCceeeecCCcccccCCcccee-cCCCE-EEEECCCC----
Confidence 3777788884 344566666665 7888 9999999732 21 1100 0011122322 23222 34444211
Q ss_pred CCCCCCCCCcccccCCCCCeEEEEEee---cccee--------------ccccCCEEEEeeccCCCCEEEEEeecCceee
Q 007532 380 GLTSSDPQPVDLVDVEMGKEYELVITT---YAGLY--------------RYRVGDILRVIGFHNSAPQFHFVRRKNVLLS 442 (599)
Q Consensus 380 ~~~~~~~~~l~~~ev~~G~~YelviTt---~~GLy--------------RYr~GDvV~v~gf~~~~P~i~f~gR~~~~l~ 442 (599)
.++.+|+.|||+|+. ..|+| .|+|||++++.. ...+.|+||.+++++
T Consensus 405 ------------~~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~~~~~g~~~TGD~g~~~~----~G~l~i~GR~~~~i~ 468 (562)
T PRK12492 405 ------------NELPLGERGELCIKGPQVMKGYWQQPEATAEALDAEGWFKTGDIAVIDP----DGFVRIVDRKKDLII 468 (562)
T ss_pred ------------CCCCCCCceEEEEeCCccccccccCchhhhhcccCCCceecCcEEEECC----CCeEEEecccCCeEE
Confidence 135689999999985 34555 299999999984 458999999999999
Q ss_pred ccccccCHHHHHHHHHH
Q 007532 443 IESDKTDEAELQNAIDN 459 (599)
Q Consensus 443 ~~GEk~~e~~v~~av~~ 459 (599)
+.|+++++.+|+.++.+
T Consensus 469 ~~G~~i~~~eIE~~l~~ 485 (562)
T PRK12492 469 VSGFNVYPNEIEDVVMA 485 (562)
T ss_pred ECCEEECHHHHHHHHHh
Confidence 99999999999999964
No 56
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.16 E-value=6.2e-10 Score=125.34 Aligned_cols=153 Identities=14% Similarity=0.164 Sum_probs=98.4
Q ss_pred CCHHHHHHHHHHhccccccccccccCCCCceeEEEEecch---hhhHHHHHHHhCCCCCccccccccccccc-cccCCCC
Q 007532 276 PNTELAEFIRMECSKENWERIITRIWPNTKYLDVIVTGAM---AQYIPTLDYYSGGKLPMACTMYASSECYF-GLNLNPI 351 (599)
Q Consensus 276 ~~p~~A~~L~~~~~~~~~~g~~~~lWP~l~~l~~~~~g~~---~~y~~~l~~~~g~~~~~~~~~Y~asEg~i-~i~~~~~ 351 (599)
..|..+.+|....... ..+.++ .++++++||. ....+++++.++. .+++ .+||+||+.. .....+.
T Consensus 270 ~vPt~~~~ll~~~~~~-----~~~~~~---~lr~~~~gg~~~~~~~~~~~~~~~~~-~~i~-~~YG~TE~~~~~~~~~~~ 339 (534)
T COG0318 270 GVPTFLRELLDNPEKD-----DDDLSS---SLRLVLSGGAPLPPELLERFEERFGP-IAIL-EGYGLTETSPVVTINPPD 339 (534)
T ss_pred cchHHHHHHHhCCccC-----cccccc---ceEEEEecCCcCCHHHHHHHHHHhCC-CceE-EeecccccCceeecCCCc
Confidence 3676666655443321 112222 2889999985 4677888888875 5677 9999999953 3222111
Q ss_pred C---CCCCCceeeecCceEEEEeeCCCCCCCCCCCCCCCCcccccCCCCCeEEEEEee---ccceec-------------
Q 007532 352 C---RPSEVSYTIMPNMAYFEFLPQEPSDSFGLTSSDPQPVDLVDVEMGKEYELVITT---YAGLYR------------- 412 (599)
Q Consensus 352 ~---~~~~~~~~l~~~~~ffEFip~~~~~~~~~~~~~~~~l~~~ev~~G~~YelviTt---~~GLyR------------- 412 (599)
. .....+. ..|+ .-...++.++. ++.+|+.|||+|-. ..|+|+
T Consensus 340 ~~~~~~~~~G~-~~pg-~~v~Ivd~~~~----------------~~~pg~vGei~irgp~v~~GY~~~pe~t~~~f~~~g 401 (534)
T COG0318 340 DLLAKPGSVGR-PLPG-VEVRIVDPDGG----------------EVLPGEVGEIWVRGPNVMKGYWNRPEATAEAFDEDG 401 (534)
T ss_pred hhhhcCCcccc-cCCC-cEEEEEeCCCC----------------ccCCCCceEEEEECchhhhhhcCChHHHHHhhccCC
Confidence 1 0111121 1222 12222322211 12338899999953 466663
Q ss_pred -cccCCEEEEeeccCCCCEEEEEeecCceeeccccccCHHHHHHHHHHH
Q 007532 413 -YRVGDILRVIGFHNSAPQFHFVRRKNVLLSIESDKTDEAELQNAIDNA 460 (599)
Q Consensus 413 -Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~GEk~~e~~v~~av~~a 460 (599)
|+|||+.++.. ...+.|+||.+|+|+..||++++.+||+++.+.
T Consensus 402 W~~TGDlg~~d~----~G~l~i~gR~kd~I~~gG~ni~p~eiE~~l~~~ 446 (534)
T COG0318 402 WLRTGDLGYVDE----DGYLYIVGRLKDLIISGGENIYPEEIEAVLAEH 446 (534)
T ss_pred eeeecceEEEcC----CccEEEEeccceEEEeCCeEECHHHHHHHHHhC
Confidence 89999998874 478999999999999999999999999999764
No 57
>PRK13383 acyl-CoA synthetase; Provisional
Probab=99.16 E-value=1e-08 Score=114.47 Aligned_cols=128 Identities=15% Similarity=0.119 Sum_probs=85.6
Q ss_pred eEEEEecch---hhhHHHHHHHhCCCCCccccccccccccccccCCCCC---CCCCCceeeecCceEEEEeeCCCCCCCC
Q 007532 307 LDVIVTGAM---AQYIPTLDYYSGGKLPMACTMYASSECYFGLNLNPIC---RPSEVSYTIMPNMAYFEFLPQEPSDSFG 380 (599)
Q Consensus 307 l~~~~~g~~---~~y~~~l~~~~g~~~~~~~~~Y~asEg~i~i~~~~~~---~~~~~~~~l~~~~~ffEFip~~~~~~~~ 380 (599)
++.+++||. ...++++.+.+| ++++ +.||+||+.......+.. .+...+. ..|+ .-+++++.+.
T Consensus 294 lr~i~~gG~~l~~~~~~~~~~~~g--~~v~-~~YG~tE~~~~~~~~~~~~~~~~~~~G~-~~~~-~~~~i~d~~~----- 363 (516)
T PRK13383 294 LRVVMSSGDRLDPTLGQRFMDTYG--DILY-NGYGSTEVGIGALATPADLRDAPETVGK-PVAG-CPVRILDRNN----- 363 (516)
T ss_pred eEEEEECCCCCCHHHHHHHHHHcC--chhh-hcccccccccceeccccccccCCCcccC-CCCC-cEEEEECCCC-----
Confidence 778888874 345677777776 6787 999999984322111110 0011111 1122 1244444221
Q ss_pred CCCCCCCCcccccCCCCCeEEEEEeec---ccee----------ccccCCEEEEeeccCCCCEEEEEeecCceeeccccc
Q 007532 381 LTSSDPQPVDLVDVEMGKEYELVITTY---AGLY----------RYRVGDILRVIGFHNSAPQFHFVRRKNVLLSIESDK 447 (599)
Q Consensus 381 ~~~~~~~~l~~~ev~~G~~YelviTt~---~GLy----------RYr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~GEk 447 (599)
.++.+|+.|||++++. .|++ .|+|||++++.. ...+.|+||.++++++.|++
T Consensus 364 -----------~~~~~g~~Gel~v~g~~~~~~Y~~~~~~~~~~g~~~TGDl~~~d~----~G~l~i~GR~~~~i~~~G~~ 428 (516)
T PRK13383 364 -----------RPVGPRVTGRIFVGGELAGTRYTDGGGKAVVDGMTSTGDMGYLDN----AGRLFIVGREDDMIISGGEN 428 (516)
T ss_pred -----------CCCCCCCceEEEEecCcccccccCCchhheecCceecceeEEEcC----CccEEEeccccceEEECCEE
Confidence 2356899999999853 4444 467999999874 45789999999999999999
Q ss_pred cCHHHHHHHHHH
Q 007532 448 TDEAELQNAIDN 459 (599)
Q Consensus 448 ~~e~~v~~av~~ 459 (599)
+++.+|+++|.+
T Consensus 429 v~~~eiE~~l~~ 440 (516)
T PRK13383 429 VYPRAVENALAA 440 (516)
T ss_pred ECHHHHHHHHHh
Confidence 999999999965
No 58
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=99.16 E-value=1.1e-09 Score=123.86 Aligned_cols=142 Identities=14% Similarity=0.194 Sum_probs=84.3
Q ss_pred eEEEEecch---hhhHHHHHHHhCCCCCccccccccccccccccCCCCCCCCCCceeeecCceEEEEeeCCCCC------
Q 007532 307 LDVIVTGAM---AQYIPTLDYYSGGKLPMACTMYASSECYFGLNLNPICRPSEVSYTIMPNMAYFEFLPQEPSD------ 377 (599)
Q Consensus 307 l~~~~~g~~---~~y~~~l~~~~g~~~~~~~~~Y~asEg~i~i~~~~~~~~~~~~~~l~~~~~ffEFip~~~~~------ 377 (599)
++.+++||. ....+.+++.+++ ++++ +.||+||+...+......++.... +......|..+....
T Consensus 290 lr~~~~gG~~l~~~~~~~~~~~~~~-~~~~-~~YG~TE~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 363 (563)
T PLN02860 290 VRKILNGGGSLSSRLLPDAKKLFPN-AKLF-SAYGMTEACSSLTFMTLHDPTLES----PKQTLQTVNQTKSSSVHQPQG 363 (563)
T ss_pred eeEEEeCCCcCCHHHHHHHHHhcCC-Ccee-cCCCccccCccccccccccccccc----chhhhhhhcccccccccccCC
Confidence 788888884 3455677777766 8898 999999974322111110000000 000001111100000
Q ss_pred -CCCCCCCCCCCcccccCCCCCeEEEEEee---ccceec--------------cccCCEEEEeeccCCCCEEEEEeecCc
Q 007532 378 -SFGLTSSDPQPVDLVDVEMGKEYELVITT---YAGLYR--------------YRVGDILRVIGFHNSAPQFHFVRRKNV 439 (599)
Q Consensus 378 -~~~~~~~~~~~l~~~ev~~G~~YelviTt---~~GLyR--------------Yr~GDvV~v~gf~~~~P~i~f~gR~~~ 439 (599)
..+.+- ..-.+.+..-++|+.+||+|.. ..|+|. |+|||++++.. ...+.|+||.+|
T Consensus 364 ~~vG~p~-~~~~v~i~~~~~g~~Gel~v~g~~~~~GY~~~~~~t~~~~~~~g~~~TGDl~~~d~----dG~l~~~GR~~d 438 (563)
T PLN02860 364 VCVGKPA-PHVELKIGLDESSRVGRILTRGPHVMLGYWGQNSETASVLSNDGWLDTGDIGWIDK----AGNLWLIGRSND 438 (563)
T ss_pred cccCCcc-CCcEEEEecCCCCceeEEEEecCcccccccCCccccchhccCCCeEEccceEEEcC----CCCEEEeecccc
Confidence 000000 0001111112368999999975 356652 79999999973 567999999999
Q ss_pred eeeccccccCHHHHHHHHHH
Q 007532 440 LLSIESDKTDEAELQNAIDN 459 (599)
Q Consensus 440 ~l~~~GEk~~e~~v~~av~~ 459 (599)
+++++|+++++.+|++++.+
T Consensus 439 ~i~~~G~~v~p~eIE~~l~~ 458 (563)
T PLN02860 439 RIKTGGENVYPEEVEAVLSQ 458 (563)
T ss_pred eeEECCEEccHHHHHHHHHh
Confidence 99999999999999999965
No 59
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=99.15 E-value=4.3e-10 Score=138.93 Aligned_cols=129 Identities=19% Similarity=0.355 Sum_probs=86.0
Q ss_pred eEEEEecch---hhhHHHHHHHhCCCCCccccccccccccccccCCCCCCCC---------CCceeeecCceEEEEeeCC
Q 007532 307 LDVIVTGAM---AQYIPTLDYYSGGKLPMACTMYASSECYFGLNLNPICRPS---------EVSYTIMPNMAYFEFLPQE 374 (599)
Q Consensus 307 l~~~~~g~~---~~y~~~l~~~~g~~~~~~~~~Y~asEg~i~i~~~~~~~~~---------~~~~~l~~~~~ffEFip~~ 374 (599)
++.++.||. ....+++++.++ ++++ +.||.||+.+.....+.++.. ..|.. +++.. +..++.+
T Consensus 719 lr~i~~gGe~l~~~~~~~~~~~~~--~~l~-n~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~iG~p-~~~~~-~~i~d~~ 793 (1296)
T PRK10252 719 LRQVFCSGEALPADLCREWQQLTG--APLH-NLYGPTEAAVDVSWYPAFGEELAAVRGSSVPIGYP-VWNTG-LRILDAR 793 (1296)
T ss_pred ccEEEEecCCCCHHHHHHHHhcCC--CEEE-eCCCcchhhheeeeeecccccccccCCCCCCcccc-cCCCE-EEEECCC
Confidence 667777774 344566666554 7888 999999985543222211100 11221 22222 1122211
Q ss_pred CCCCCCCCCCCCCCcccccCCCCCeEEEEEeec---cceec--------------------cccCCEEEEeeccCCCCEE
Q 007532 375 PSDSFGLTSSDPQPVDLVDVEMGKEYELVITTY---AGLYR--------------------YRVGDILRVIGFHNSAPQF 431 (599)
Q Consensus 375 ~~~~~~~~~~~~~~l~~~ev~~G~~YelviTt~---~GLyR--------------------Yr~GDvV~v~gf~~~~P~i 431 (599)
...+.+|+.|||+|+.. .|+|. |+|||++++.. ...+
T Consensus 794 ----------------~~~~~~g~~Gel~i~g~~~~~GY~~~~~~t~~~f~~~~~~~~~~~y~TGDl~~~~~----~G~l 853 (1296)
T PRK10252 794 ----------------MRPVPPGVAGDLYLTGIQLAQGYLGRPDLTASRFIADPFAPGERMYRTGDVARWLD----DGAV 853 (1296)
T ss_pred ----------------CCCCCCCCceEEEecccccchhhCCCcccchhhcccCCCCCCCEEEecCceEEEcC----CCcE
Confidence 12467899999999852 45442 99999999983 4689
Q ss_pred EEEeecCceeeccccccCHHHHHHHHHHH
Q 007532 432 HFVRRKNVLLSIESDKTDEAELQNAIDNA 460 (599)
Q Consensus 432 ~f~gR~~~~l~~~GEk~~e~~v~~av~~a 460 (599)
+|+||.+++++++|+++...+|+.+|.+.
T Consensus 854 ~~~GR~d~~ik~~G~ri~~~eIE~~l~~~ 882 (1296)
T PRK10252 854 EYLGRSDDQLKIRGQRIELGEIDRAMQAL 882 (1296)
T ss_pred EEecccCCeEEEeeEEecHHHHHHHHHhC
Confidence 99999999999999999999999999763
No 60
>PRK13382 acyl-CoA synthetase; Provisional
Probab=99.15 E-value=1.5e-08 Score=113.85 Aligned_cols=128 Identities=13% Similarity=0.139 Sum_probs=86.2
Q ss_pred eEEEEecch---hhhHHHHHHHhCCCCCccccccccccccccccCCCCC---CCCCCceeeecCceEEEEeeCCCCCCCC
Q 007532 307 LDVIVTGAM---AQYIPTLDYYSGGKLPMACTMYASSECYFGLNLNPIC---RPSEVSYTIMPNMAYFEFLPQEPSDSFG 380 (599)
Q Consensus 307 l~~~~~g~~---~~y~~~l~~~~g~~~~~~~~~Y~asEg~i~i~~~~~~---~~~~~~~~l~~~~~ffEFip~~~~~~~~ 380 (599)
++.+++||. ...+..+++.+| .+++ +.||+||+.......+.. .+...|. ..++ .-++.++.+
T Consensus 314 lr~i~~gG~~l~~~~~~~~~~~~~--~~i~-~~YG~TE~~~~~~~~~~~~~~~~~~vG~-p~~~-~~~~i~d~~------ 382 (537)
T PRK13382 314 LRFAAASGSRMRPDVVIAFMDQFG--DVIY-NNYNATEAGMIATATPADLRAAPDTAGR-PAEG-TEIRILDQD------ 382 (537)
T ss_pred eeEEEEcCCCCCHHHHHHHHHHcC--CcEE-ecccccccCcceecChhHhccCCCCccc-cCcC-cEEEEECCC------
Confidence 778888874 355677777776 5677 999999984322111100 0111121 1222 234455432
Q ss_pred CCCCCCCCcccccCCCCCeEEEEEeec---cce----------eccccCCEEEEeeccCCCCEEEEEeecCceeeccccc
Q 007532 381 LTSSDPQPVDLVDVEMGKEYELVITTY---AGL----------YRYRVGDILRVIGFHNSAPQFHFVRRKNVLLSIESDK 447 (599)
Q Consensus 381 ~~~~~~~~l~~~ev~~G~~YelviTt~---~GL----------yRYr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~GEk 447 (599)
..++..|+.+||+|++. .|+ -.|+|||++++.. ...+.|+||.+|++++.|++
T Consensus 383 ----------~~~~~~g~~GEl~v~g~~~~~gY~~~~~~~~~~g~~~TGDl~~~~~----~g~l~~~GR~dd~ik~~G~~ 448 (537)
T PRK13382 383 ----------FREVPTGEVGTIFVRNDTQFDGYTSGSTKDFHDGFMASGDVGYLDE----NGRLFVVGRDDEMIVSGGEN 448 (537)
T ss_pred ----------CCCCCCCCeeEEEEEcCCcccCccccchhhccCCCEeeCceEEEeC----CCcEEEeccccceeEECCEE
Confidence 12457899999999863 333 1489999999974 35789999999999999999
Q ss_pred cCHHHHHHHHHH
Q 007532 448 TDEAELQNAIDN 459 (599)
Q Consensus 448 ~~e~~v~~av~~ 459 (599)
+++.+|+.+|.+
T Consensus 449 v~~~eIE~~l~~ 460 (537)
T PRK13382 449 VYPIEVEKTLAT 460 (537)
T ss_pred ECHHHHHHHHHh
Confidence 999999999965
No 61
>PLN03051 acyl-activating enzyme; Provisional
Probab=99.14 E-value=2.3e-09 Score=119.34 Aligned_cols=43 Identities=26% Similarity=0.341 Sum_probs=39.6
Q ss_pred cccCCEEEEeeccCCCCEEEEEeecCceeeccccccCHHHHHHHHHH
Q 007532 413 YRVGDILRVIGFHNSAPQFHFVRRKNVLLSIESDKTDEAELQNAIDN 459 (599)
Q Consensus 413 Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~GEk~~e~~v~~av~~ 459 (599)
|+|||++++.. ...+.|+||.+|++++.|++|++.|||++|.+
T Consensus 359 ~~TGDlg~~d~----dG~l~~~gR~~d~ik~~G~~v~p~EIE~~l~~ 401 (499)
T PLN03051 359 RRHGDIMKRTP----GGYFCVQGRADDTMNLGGIKTSSVEIERACDR 401 (499)
T ss_pred eecCCeEEECC----CCcEEEEeccCCEEeeCCEECCHHHHHHHHHh
Confidence 89999999873 45899999999999999999999999999975
No 62
>PLN02736 long-chain acyl-CoA synthetase
Probab=99.13 E-value=2e-09 Score=123.93 Aligned_cols=132 Identities=13% Similarity=0.163 Sum_probs=85.0
Q ss_pred eEEEEecch---hhhHHHHHHHhCCCCCccccccccccccccccCCC--CCCCCCCceeeecCceEEEEeeCCCCCCCCC
Q 007532 307 LDVIVTGAM---AQYIPTLDYYSGGKLPMACTMYASSECYFGLNLNP--ICRPSEVSYTIMPNMAYFEFLPQEPSDSFGL 381 (599)
Q Consensus 307 l~~~~~g~~---~~y~~~l~~~~g~~~~~~~~~Y~asEg~i~i~~~~--~~~~~~~~~~l~~~~~ffEFip~~~~~~~~~ 381 (599)
++.+++||. ....+.+++.+| ++++ ++||+||+...+.... ...+...|. ..|+. -..+++.++..
T Consensus 378 lr~~~~gGa~l~~~~~~~~~~~~g--~~~~-~~YG~TE~~~~~~~~~~~~~~~~~vG~-p~pg~-~v~i~d~~~~~---- 448 (651)
T PLN02736 378 VRFMSSGASPLSPDVMEFLRICFG--GRVL-EGYGMTETSCVISGMDEGDNLSGHVGS-PNPAC-EVKLVDVPEMN---- 448 (651)
T ss_pred EEEEEeCCCCCCHHHHHHHHHHhC--CCeE-EEechHHhchheeccCCCCCCCCccCC-ccCce-EEEEEEccccC----
Confidence 778888885 344556666665 6788 9999999854322111 111111222 12322 23444432210
Q ss_pred CCCCCCCcccccCCCCCeEEEEEee---ccceec--------------cccCCEEEEeeccCCCCEEEEEeecCceeec-
Q 007532 382 TSSDPQPVDLVDVEMGKEYELVITT---YAGLYR--------------YRVGDILRVIGFHNSAPQFHFVRRKNVLLSI- 443 (599)
Q Consensus 382 ~~~~~~~l~~~ev~~G~~YelviTt---~~GLyR--------------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~- 443 (599)
. ..+.+++..|||+|.. ..|+|. |+|||+++++. ...+.|+||.+|++++
T Consensus 449 ------~--~~~~~~~~~GEl~vrgp~v~~GY~~~~~~t~~~~~~dgw~~TGDlg~~d~----dG~l~i~GR~kd~ik~~ 516 (651)
T PLN02736 449 ------Y--TSEDQPYPRGEICVRGPIIFKGYYKDEVQTREVIDEDGWLHTGDIGLWLP----GGRLKIIDRKKNIFKLA 516 (651)
T ss_pred ------c--ccCCCCCCCceEEecCCccccccccCHHHHHhhhccCCCeeccceEEEcC----CCcEEEEEechhheEcC
Confidence 0 0123455578999964 467763 89999999983 4579999999999998
Q ss_pred cccccCHHHHHHHHHH
Q 007532 444 ESDKTDEAELQNAIDN 459 (599)
Q Consensus 444 ~GEk~~e~~v~~av~~ 459 (599)
.|++|++.+||+++.+
T Consensus 517 ~G~~V~p~eIE~~l~~ 532 (651)
T PLN02736 517 QGEYIAPEKIENVYAK 532 (651)
T ss_pred CCcEechHHHHHHHhc
Confidence 6999999999999965
No 63
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=99.13 E-value=4.7e-09 Score=116.44 Aligned_cols=129 Identities=19% Similarity=0.270 Sum_probs=85.0
Q ss_pred eEEEEecch---hhhHHHHHHHhCCCCCccccccccccccccccCCCCC---CCCCCceeeecCceEEEEeeCCCCCCCC
Q 007532 307 LDVIVTGAM---AQYIPTLDYYSGGKLPMACTMYASSECYFGLNLNPIC---RPSEVSYTIMPNMAYFEFLPQEPSDSFG 380 (599)
Q Consensus 307 l~~~~~g~~---~~y~~~l~~~~g~~~~~~~~~Y~asEg~i~i~~~~~~---~~~~~~~~l~~~~~ffEFip~~~~~~~~ 380 (599)
++.+.+||. ....+.+++.+++ ++++ ..||+||+.......+.. .+...+- ..|+. ....++++.
T Consensus 276 l~~~~~~g~~l~~~~~~~~~~~~~~-~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~vG~-~~~~~-~~~i~~~~~----- 346 (515)
T TIGR03098 276 LRYLTNSGGAMPRATLSRLRSFLPN-ARLF-LMYGLTEAFRSTYLPPEEVDRRPDSIGK-AIPNA-EVLVLREDG----- 346 (515)
T ss_pred eEEEEecCCcCCHHHHHHHHHHCCC-CeEe-eeeccccccceEecccccccCCCCCcce-ecCCC-EEEEECCCC-----
Confidence 677777774 3556677777766 7888 999999984322111110 0111121 12222 233443221
Q ss_pred CCCCCCCCcccccCCCCCeEEEEEee---cccee-------------------------ccccCCEEEEeeccCCCCEEE
Q 007532 381 LTSSDPQPVDLVDVEMGKEYELVITT---YAGLY-------------------------RYRVGDILRVIGFHNSAPQFH 432 (599)
Q Consensus 381 ~~~~~~~~l~~~ev~~G~~YelviTt---~~GLy-------------------------RYr~GDvV~v~gf~~~~P~i~ 432 (599)
.++..|+.||+++.+ ..|+| .|+|||++++.. .-.+.
T Consensus 347 -----------~~~~~~~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~----~g~l~ 411 (515)
T TIGR03098 347 -----------SECAPGEEGELVHRGALVAMGYWNDPEKTAERFRPLPPRPGELHLPELAVWSGDTVRRDE----EGFLY 411 (515)
T ss_pred -----------CCCCCCCceEEEEcCchhhccccCCchhhhhhhhccCCccccccccccceeccceEEEcC----CceEE
Confidence 134578899999965 24444 278999999863 34789
Q ss_pred EEeecCceeeccccccCHHHHHHHHHH
Q 007532 433 FVRRKNVLLSIESDKTDEAELQNAIDN 459 (599)
Q Consensus 433 f~gR~~~~l~~~GEk~~e~~v~~av~~ 459 (599)
+.||.+|++++.|+++++.+|++++.+
T Consensus 412 ~~GR~~d~i~~~G~~v~~~eiE~~l~~ 438 (515)
T TIGR03098 412 FVGRRDEMIKTSGYRVSPTEVEEVAYA 438 (515)
T ss_pred EEeccccceecCCEEeCHHHHHHHHhc
Confidence 999999999999999999999999965
No 64
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.12 E-value=1.4e-09 Score=122.64 Aligned_cols=129 Identities=13% Similarity=0.153 Sum_probs=87.2
Q ss_pred eEEEEecch---hhhHHHHHHHhCCCCCccccccccccccc-cccC--CCCCCCCCCceeeecCceEEEEeeCCCCCCCC
Q 007532 307 LDVIVTGAM---AQYIPTLDYYSGGKLPMACTMYASSECYF-GLNL--NPICRPSEVSYTIMPNMAYFEFLPQEPSDSFG 380 (599)
Q Consensus 307 l~~~~~g~~---~~y~~~l~~~~g~~~~~~~~~Y~asEg~i-~i~~--~~~~~~~~~~~~l~~~~~ffEFip~~~~~~~~ 380 (599)
++.+++||. ...+..+++.++ ++++ +.||+||+.. +... .....+...+ +..|+.. .+.+++++.
T Consensus 325 lr~v~~gg~~~~~~~~~~~~~~~~--~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~G-~~~~~~~-~~i~~~~~~---- 395 (563)
T PRK06710 325 IRACISGSAPLPVEVQEKFETVTG--GKLV-EGYGLTESSPVTHSNFLWEKRVPGSIG-VPWPDTE-AMIMSLETG---- 395 (563)
T ss_pred hhheeeCCCcCCHHHHHHHHHhhC--CCEe-cccccccCccccccCcccccccCCccC-CCCCCCe-EEEEECCCC----
Confidence 667777774 345567777775 6788 8999999743 2110 0000011112 2234432 344543322
Q ss_pred CCCCCCCCcccccCCCCCeEEEEEeec---cceec-------------cccCCEEEEeeccCCCCEEEEEeecCceeecc
Q 007532 381 LTSSDPQPVDLVDVEMGKEYELVITTY---AGLYR-------------YRVGDILRVIGFHNSAPQFHFVRRKNVLLSIE 444 (599)
Q Consensus 381 ~~~~~~~~l~~~ev~~G~~YelviTt~---~GLyR-------------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~ 444 (599)
..+..|+.|||+++.. .|+|. |+|||+++.+. ...+.++||.++++++.
T Consensus 396 -----------~~~~~g~~Gel~v~g~~~~~gY~~~~~~~~~~~~~g~~~TGD~~~~~~----~g~~~~~GR~dd~i~~~ 460 (563)
T PRK06710 396 -----------EALPPGEIGEIVVKGPQIMKGYWNKPEETAAVLQDGWLHTGDVGYMDE----DGFFYVKDRKKDMIVAS 460 (563)
T ss_pred -----------ccCCCCCceEEEEecCccchhhhCChHHHhhhcccCcccccceEEEcC----CCcEEEeeccccEEEEC
Confidence 2357899999999863 45554 99999998873 45799999999999999
Q ss_pred ccccCHHHHHHHHHH
Q 007532 445 SDKTDEAELQNAIDN 459 (599)
Q Consensus 445 GEk~~e~~v~~av~~ 459 (599)
|+++++.+|+++|.+
T Consensus 461 G~~v~p~eiE~~l~~ 475 (563)
T PRK06710 461 GFNVYPREVEEVLYE 475 (563)
T ss_pred CEEECHHHHHHHHHh
Confidence 999999999999966
No 65
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional
Probab=99.12 E-value=1.9e-08 Score=111.92 Aligned_cols=129 Identities=15% Similarity=0.156 Sum_probs=87.8
Q ss_pred eeEEEEecch---hhhHHHHHHHhCCCCCccccccccccccc-cccC--CCCCCCCCCceeeecCceEEEEeeCCCCCCC
Q 007532 306 YLDVIVTGAM---AQYIPTLDYYSGGKLPMACTMYASSECYF-GLNL--NPICRPSEVSYTIMPNMAYFEFLPQEPSDSF 379 (599)
Q Consensus 306 ~l~~~~~g~~---~~y~~~l~~~~g~~~~~~~~~Y~asEg~i-~i~~--~~~~~~~~~~~~l~~~~~ffEFip~~~~~~~ 379 (599)
.++.+++||. ...++.+++.++ ++++ ..||+||+.. +... +....++..++ ..|+. -++.++++.
T Consensus 272 ~l~~v~~gg~~~~~~~~~~~~~~~~--~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~G~-~~~~~-~~~i~d~~~---- 342 (509)
T PRK12406 272 SLRHVIHAAAPCPADVKRAMIEWWG--PVIY-EYYGSTESGAVTFATSEDALSHPGTVGK-AAPGA-ELRFVDEDG---- 342 (509)
T ss_pred ceeEEEEcCCCCCHHHHHHHHHHcC--CcEE-eeccccccCceEecCcccccccCCCcCc-cCCCc-EEEEECCCC----
Confidence 3778888874 456677888775 6777 9999999843 2110 00111122233 22332 244554321
Q ss_pred CCCCCCCCCcccccCCCCCeEEEEEeec----cceec-------------cccCCEEEEeeccCCCCEEEEEeecCceee
Q 007532 380 GLTSSDPQPVDLVDVEMGKEYELVITTY----AGLYR-------------YRVGDILRVIGFHNSAPQFHFVRRKNVLLS 442 (599)
Q Consensus 380 ~~~~~~~~~l~~~ev~~G~~YelviTt~----~GLyR-------------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~ 442 (599)
+++..|+.+||+++.. .|++. |+|||++++.. ...+.|+||.+++++
T Consensus 343 ------------~~~~~g~~Gel~v~~~~~~~~~y~~~~~~~~~~~~~~~~~TGD~~~~~~----~g~~~~~GR~~d~ik 406 (509)
T PRK12406 343 ------------RPLPQGEIGEIYSRIAGNPDFTYHNKPEKRAEIDRGGFITSGDVGYLDA----DGYLFLCDRKRDMVI 406 (509)
T ss_pred ------------CCCCCCCceEEEEECCccccccccCCchhcccccCCCCeEEccEEEEcC----CceEEEeecccceEE
Confidence 2457899999999753 24542 78999999874 457899999999999
Q ss_pred ccccccCHHHHHHHHHH
Q 007532 443 IESDKTDEAELQNAIDN 459 (599)
Q Consensus 443 ~~GEk~~e~~v~~av~~ 459 (599)
++|+++++.+|+++|.+
T Consensus 407 ~~G~~v~~~~IE~~l~~ 423 (509)
T PRK12406 407 SGGVNIYPAEIEAVLHA 423 (509)
T ss_pred ECCEEECHHHHHHHHHh
Confidence 99999999999999965
No 66
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=99.12 E-value=1.1e-09 Score=123.38 Aligned_cols=129 Identities=19% Similarity=0.245 Sum_probs=85.4
Q ss_pred eEEEEecch---hhhHHHHHHHhCCCCCccccccccccccccccCCCCCC---CCCCceeeecCceEEEEeeCCCCCCCC
Q 007532 307 LDVIVTGAM---AQYIPTLDYYSGGKLPMACTMYASSECYFGLNLNPICR---PSEVSYTIMPNMAYFEFLPQEPSDSFG 380 (599)
Q Consensus 307 l~~~~~g~~---~~y~~~l~~~~g~~~~~~~~~Y~asEg~i~i~~~~~~~---~~~~~~~l~~~~~ffEFip~~~~~~~~ 380 (599)
|+.+.+||. ....+++++.++ ++++ +.||+||+...+...+... +...+. ..++. -...++.+
T Consensus 331 lr~v~~gG~~~~~~~~~~~~~~~~--~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~vG~-~~~~~-~v~i~d~~------ 399 (560)
T PRK08751 331 LKMTLGGGMAVQRSVAERWKQVTG--LTLV-EAYGLTETSPAACINPLTLKEYNGSIGL-PIPST-DACIKDDA------ 399 (560)
T ss_pred heeeeeCCCCCCHHHHHHHHHHhC--CeEE-EeeccccCCCceecccccccccCCCcCc-cCCCc-eEEEECCC------
Confidence 677788874 344567777775 7788 8999999854332211100 001111 11211 12233211
Q ss_pred CCCCCCCCcccccCCCCCeEEEEEeec---cceec--------------cccCCEEEEeeccCCCCEEEEEeecCceeec
Q 007532 381 LTSSDPQPVDLVDVEMGKEYELVITTY---AGLYR--------------YRVGDILRVIGFHNSAPQFHFVRRKNVLLSI 443 (599)
Q Consensus 381 ~~~~~~~~l~~~ev~~G~~YelviTt~---~GLyR--------------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~ 443 (599)
..++..|+.|||+|++. .|+|. |+|||+++++. ...+.++||.+|++++
T Consensus 400 ----------~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~g~~~TGD~~~~~~----~g~l~i~GR~~d~i~~ 465 (560)
T PRK08751 400 ----------GTVLAIGEIGELCIKGPQVMKGYWKRPEETAKVMDADGWLHTGDIARMDE----QGFVYIVDRKKDMILV 465 (560)
T ss_pred ----------CCCCCCCCceEEEEecCccchhhcCChhhhhhccccCCCccccceEEEcC----CceEEEEeechhheeE
Confidence 12357899999999763 44443 89999999873 4689999999999999
Q ss_pred cccccCHHHHHHHHHHH
Q 007532 444 ESDKTDEAELQNAIDNA 460 (599)
Q Consensus 444 ~GEk~~e~~v~~av~~a 460 (599)
.|+++.+.+||++|.+.
T Consensus 466 ~G~~v~p~eiE~~l~~~ 482 (560)
T PRK08751 466 SGFNVYPNEIEDVIAMM 482 (560)
T ss_pred CCEEEcHHHHHHHHHhC
Confidence 99999999999999653
No 67
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=99.12 E-value=1.2e-08 Score=113.67 Aligned_cols=130 Identities=15% Similarity=0.200 Sum_probs=90.9
Q ss_pred CCceeEEEEecch---hhhHHHHHHHhCCCCCccccccccccccccccCCCCC--CCCCCceeeecCceEEEEeeCCCCC
Q 007532 303 NTKYLDVIVTGAM---AQYIPTLDYYSGGKLPMACTMYASSECYFGLNLNPIC--RPSEVSYTIMPNMAYFEFLPQEPSD 377 (599)
Q Consensus 303 ~l~~l~~~~~g~~---~~y~~~l~~~~g~~~~~~~~~Y~asEg~i~i~~~~~~--~~~~~~~~l~~~~~ffEFip~~~~~ 377 (599)
.++.|+.+.+.|. .+-...+.+.+| +++. +.||.||...++ +.+.. .+...+. -+|.. -.+.++.+ .
T Consensus 288 dlssLr~~~SaGEPLnpe~~~w~~~~~g--~~i~-d~~gqTEtg~~~-~~~~~~~~~g~~g~-p~pG~-~~~vvdd~-g- 359 (528)
T COG0365 288 DLSSLRVLGSAGEPLNPEAFEWFYSALG--VWIL-DIYGQTETGMGF-IAGRPPVKNGSSGL-PLPGY-AVRRVDDE-G- 359 (528)
T ss_pred cchhheeeeccCCCCCHHHHHHHHHHhC--CCEe-ccccccccCccc-cCCCCCcCCCCCCC-CCCCc-eeEEECCC-C-
Confidence 3455788888874 345567777777 8998 999999986211 11111 1111122 23332 23444433 2
Q ss_pred CCCCCCCCCCCcccccCCCCCeEEEEEeec-----cceec-------------cccCCEEEEeeccCCCCEEEEEeecCc
Q 007532 378 SFGLTSSDPQPVDLVDVEMGKEYELVITTY-----AGLYR-------------YRVGDILRVIGFHNSAPQFHFVRRKNV 439 (599)
Q Consensus 378 ~~~~~~~~~~~l~~~ev~~G~~YelviTt~-----~GLyR-------------Yr~GDvV~v~gf~~~~P~i~f~gR~~~ 439 (599)
+++.+|+ |+|||... .|+|+ |.+||....+ ....|.|+||.+|
T Consensus 360 --------------~~~~~~~-G~Lvi~~~~p~~~~~~w~d~er~~~~y~~~~y~tGD~~~~D----edGy~~i~GR~DD 420 (528)
T COG0365 360 --------------NPVPPGV-GELVVRLPWPGMALTYWNDPERYKEAYFGRWYRTGDWAERD----EDGYFWLHGRSDD 420 (528)
T ss_pred --------------CcCCCCc-eEEEEeCCCchhhhhhhCCHHHHHHHHhhceeecCceeEEc----cCCCEEEEeeccc
Confidence 2456788 99999852 45777 9999999998 3589999999999
Q ss_pred eeeccccccCHHHHHHHHHH
Q 007532 440 LLSIESDKTDEAELQNAIDN 459 (599)
Q Consensus 440 ~l~~~GEk~~e~~v~~av~~ 459 (599)
+||+.|..+...|||++|.+
T Consensus 421 vI~vsG~Rig~~EvE~~l~~ 440 (528)
T COG0365 421 VIKVSGKRIGPLEIESVLLA 440 (528)
T ss_pred eEeccCeeccHHHHHHHHHh
Confidence 99999999999999999976
No 68
>PLN02614 long-chain acyl-CoA synthetase
Probab=99.12 E-value=2.6e-09 Score=123.52 Aligned_cols=132 Identities=15% Similarity=0.232 Sum_probs=85.8
Q ss_pred eEEEEecch--hhhHHHHHHHhCCCCCccccccccccccccccCC-CCC--CCCCCceeeecCceEEEEeeCCCCCCCCC
Q 007532 307 LDVIVTGAM--AQYIPTLDYYSGGKLPMACTMYASSECYFGLNLN-PIC--RPSEVSYTIMPNMAYFEFLPQEPSDSFGL 381 (599)
Q Consensus 307 l~~~~~g~~--~~y~~~l~~~~g~~~~~~~~~Y~asEg~i~i~~~-~~~--~~~~~~~~l~~~~~ffEFip~~~~~~~~~ 381 (599)
++.+++||. .+-..++.+.+++ ++++ ++||.||+....... +.. .+...|. .+|+.. .-.+++++.+
T Consensus 388 lr~~~~Gga~l~~~~~~~~~~~~~-~~i~-~~YG~TE~~~~~~~~~~~~~~~~gsvG~-p~pg~e-vki~d~~~~~---- 459 (666)
T PLN02614 388 VRIILSGAAPLASHVESFLRVVAC-CHVL-QGYGLTESCAGTFVSLPDELDMLGTVGP-PVPNVD-IRLESVPEME---- 459 (666)
T ss_pred EEEEEEcCCCCCHHHHHHHHHhcC-CCEE-eeCchHhhhhheeeeccccCCcCCcccC-cCCceE-EEEeeecccC----
Confidence 677788875 3334455555665 7888 999999974322111 110 0112222 123221 2223322110
Q ss_pred CCCCCCCcccccCCCCCeEEEEEee---ccceec-------------cccCCEEEEeeccCCCCEEEEEeecCceeec-c
Q 007532 382 TSSDPQPVDLVDVEMGKEYELVITT---YAGLYR-------------YRVGDILRVIGFHNSAPQFHFVRRKNVLLSI-E 444 (599)
Q Consensus 382 ~~~~~~~l~~~ev~~G~~YelviTt---~~GLyR-------------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~-~ 444 (599)
..++.+|+.|||+|.. ..|+|+ |+|||+++++. ...+.|+||.||++++ .
T Consensus 460 ---------~~~~~~g~~GEl~vrGp~v~~GY~~~pe~T~~~f~dGw~~TGDlg~~d~----dG~l~i~gR~kd~ik~~~ 526 (666)
T PLN02614 460 ---------YDALASTPRGEICIRGKTLFSGYYKREDLTKEVLIDGWLHTGDVGEWQP----NGSMKIIDRKKNIFKLSQ 526 (666)
T ss_pred ---------cccCCCCCCceEEEcCCcccccccCCHHHhhhhhccCCcccceEEEEcC----CCCEEEEEcchhceecCC
Confidence 1245689999999964 468875 89999999983 4579999999999997 6
Q ss_pred ccccCHHHHHHHHHH
Q 007532 445 SDKTDEAELQNAIDN 459 (599)
Q Consensus 445 GEk~~e~~v~~av~~ 459 (599)
||+|++.+||+++.+
T Consensus 527 G~~V~p~eIE~~l~~ 541 (666)
T PLN02614 527 GEYVAVENIENIYGE 541 (666)
T ss_pred CeeecHHHHHHHHhc
Confidence 999999999999965
No 69
>PLN02330 4-coumarate--CoA ligase-like 1
Probab=99.11 E-value=2.7e-09 Score=120.02 Aligned_cols=130 Identities=20% Similarity=0.334 Sum_probs=86.6
Q ss_pred eEEEEecch---hhhHHHHHHHhCCCCCcccccccccccc-ccccCC-CCC-----CCCCCceeeecCceEEEEeeCCCC
Q 007532 307 LDVIVTGAM---AQYIPTLDYYSGGKLPMACTMYASSECY-FGLNLN-PIC-----RPSEVSYTIMPNMAYFEFLPQEPS 376 (599)
Q Consensus 307 l~~~~~g~~---~~y~~~l~~~~g~~~~~~~~~Y~asEg~-i~i~~~-~~~-----~~~~~~~~l~~~~~ffEFip~~~~ 376 (599)
++++++||. ...++.+++.+++ ++++ +.||+||+. +++... +.. .+...+.. .|+.. .+.++++..
T Consensus 305 l~~i~~~g~~l~~~~~~~~~~~~~~-~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~~~~vG~~-~~~~~-v~i~d~~~~ 380 (546)
T PLN02330 305 LQAIMTAAAPLAPELLTAFEAKFPG-VQVQ-EAYGLTEHSCITLTHGDPEKGHGIAKKNSVGFI-LPNLE-VKFIDPDTG 380 (546)
T ss_pred eeeEEEcCCcCCHHHHHHHHHHcCC-CeEE-ecccccccccceecCCCccccccccccCccccc-cCCcE-EEEEeCCCC
Confidence 567777774 3566777777766 8998 999999973 332110 100 00012221 12221 344443221
Q ss_pred CCCCCCCCCCCCcccccCCCCCeEEEEEee---ccceec--------------cccCCEEEEeeccCCCCEEEEEeecCc
Q 007532 377 DSFGLTSSDPQPVDLVDVEMGKEYELVITT---YAGLYR--------------YRVGDILRVIGFHNSAPQFHFVRRKNV 439 (599)
Q Consensus 377 ~~~~~~~~~~~~l~~~ev~~G~~YelviTt---~~GLyR--------------Yr~GDvV~v~gf~~~~P~i~f~gR~~~ 439 (599)
..+.+|+.|||+|+. ..|+|. |+|||++++.. ...+.|+||.++
T Consensus 381 ---------------~~~p~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~g~~~TGD~~~~~~----dG~l~~~GR~~d 441 (546)
T PLN02330 381 ---------------RSLPKNTPGELCVRSQCVMQGYYNNKEETDRTIDEDGWLHTGDIGYIDD----DGDIFIVDRIKE 441 (546)
T ss_pred ---------------ccCCCCCceEEEEecchhhhhhccCccchhhhccCCCceecccEEEEeC----CCcEEEEechHH
Confidence 235789999999974 244441 89999999884 347889999999
Q ss_pred eeeccccccCHHHHHHHHHH
Q 007532 440 LLSIESDKTDEAELQNAIDN 459 (599)
Q Consensus 440 ~l~~~GEk~~e~~v~~av~~ 459 (599)
++++.|+++++.+|+.+|.+
T Consensus 442 ~i~~~G~~v~~~~iE~~l~~ 461 (546)
T PLN02330 442 LIKYKGFQVAPAELEAILLT 461 (546)
T ss_pred hhhcCCEEECHHHHHHHHHh
Confidence 99999999999999999965
No 70
>PRK12467 peptide synthase; Provisional
Probab=99.11 E-value=2.7e-09 Score=143.86 Aligned_cols=129 Identities=18% Similarity=0.221 Sum_probs=86.4
Q ss_pred eEEEEecch---hhhHHHHHHHhCCCCCccccccccccccccccCCCCCCC-------CCCceeeecCceEEEEeeCCCC
Q 007532 307 LDVIVTGAM---AQYIPTLDYYSGGKLPMACTMYASSECYFGLNLNPICRP-------SEVSYTIMPNMAYFEFLPQEPS 376 (599)
Q Consensus 307 l~~~~~g~~---~~y~~~l~~~~g~~~~~~~~~Y~asEg~i~i~~~~~~~~-------~~~~~~l~~~~~ffEFip~~~~ 376 (599)
++.+++||. ....+++++.+++ +.++ +.||.||+.+.......... ...|. .+|+...+ .++ +.
T Consensus 3353 lr~~~~gGe~~~~~~~~~~~~~~~~-~~l~-n~YG~TE~~~~~~~~~~~~~~~~~~~~~~iG~-p~~~~~~~-v~d--~~ 3426 (3956)
T PRK12467 3353 LDIYVFGGEAVPPAAFEQVKRKLKP-RGLT-NGYGPTEAVVTVTLWKCGGDAVCEAPYAPIGR-PVAGRSIY-VLD--GQ 3426 (3956)
T ss_pred ceEEEEecCCCCHHHHHHHHHhCCC-CEEE-eCcccchhEeeeEEEecccccccCCCCCCCcc-ccCCCEEE-EEC--CC
Confidence 677888884 2344566666666 7888 99999998654321111000 00111 12222111 111 11
Q ss_pred CCCCCCCCCCCCcccccCCCCCeEEEEEee---ccceec---------------------cccCCEEEEeeccCCCCEEE
Q 007532 377 DSFGLTSSDPQPVDLVDVEMGKEYELVITT---YAGLYR---------------------YRVGDILRVIGFHNSAPQFH 432 (599)
Q Consensus 377 ~~~~~~~~~~~~l~~~ev~~G~~YelviTt---~~GLyR---------------------Yr~GDvV~v~gf~~~~P~i~ 432 (599)
...|.+|+.|||+|.. ..|+|+ |||||++++.. ...++
T Consensus 3427 --------------~~~vp~G~~GEL~i~G~~v~~GY~~~~~~T~~~F~~~p~~~~g~r~yrTGDl~~~~~----dG~l~ 3488 (3956)
T PRK12467 3427 --------------LNPVPVGVAGELYIGGVGLARGYHQRPSLTAERFVADPFSGSGGRLYRTGDLARYRA----DGVIE 3488 (3956)
T ss_pred --------------CCCCCCCCCceEEEcchhhhhhccCCcccchhhccCCCCCCCCceeeccchhheecC----CCcEE
Confidence 2346799999999974 356653 99999999973 56899
Q ss_pred EEeecCceeeccccccCHHHHHHHHHH
Q 007532 433 FVRRKNVLLSIESDKTDEAELQNAIDN 459 (599)
Q Consensus 433 f~gR~~~~l~~~GEk~~e~~v~~av~~ 459 (599)
|+||.+++++++|.+|.+.|||++|.+
T Consensus 3489 ~~GR~d~~iki~G~rIe~~EIE~~l~~ 3515 (3956)
T PRK12467 3489 YLGRIDHQVKIRGFRIELGEIEARLLQ 3515 (3956)
T ss_pred EeccccceEeeceEeecHHHHHHHHhh
Confidence 999999999999999999999999976
No 71
>PRK08315 AMP-binding domain protein; Validated
Probab=99.11 E-value=1.8e-08 Score=113.37 Aligned_cols=130 Identities=13% Similarity=0.116 Sum_probs=85.6
Q ss_pred eEEEEecch---hhhHHHHHHHhCCCCCccccccccccccccccCCCCCC-----CCCCceeeecCceEEEEeeCCCCCC
Q 007532 307 LDVIVTGAM---AQYIPTLDYYSGGKLPMACTMYASSECYFGLNLNPICR-----PSEVSYTIMPNMAYFEFLPQEPSDS 378 (599)
Q Consensus 307 l~~~~~g~~---~~y~~~l~~~~g~~~~~~~~~Y~asEg~i~i~~~~~~~-----~~~~~~~l~~~~~ffEFip~~~~~~ 378 (599)
|++++.||. ...++.+.+.++. .+++ +.||+||+..........+ +...+.. .|+ .-++.+++++.
T Consensus 317 lr~~~~~G~~~~~~~~~~~~~~~~~-~~l~-~~YG~tE~~~~~~~~~~~~~~~~~~~~vG~p-~~~-~~v~i~d~~~~-- 390 (559)
T PRK08315 317 LRTGIMAGSPCPIEVMKRVIDKMHM-SEVT-IAYGMTETSPVSTQTRTDDPLEKRVTTVGRA-LPH-LEVKIVDPETG-- 390 (559)
T ss_pred hheeEecCCCCCHHHHHHHHHHcCC-ccee-EEEcccccccceeecCcccchhhccCCCCcc-CCC-cEEEEEcCccC--
Confidence 677777764 3445667777765 5577 8999999843221111000 1112221 232 23444544321
Q ss_pred CCCCCCCCCCcccccCCCCCeEEEEEeec---ccee--------------ccccCCEEEEeeccCCCCEEEEEeecCcee
Q 007532 379 FGLTSSDPQPVDLVDVEMGKEYELVITTY---AGLY--------------RYRVGDILRVIGFHNSAPQFHFVRRKNVLL 441 (599)
Q Consensus 379 ~~~~~~~~~~l~~~ev~~G~~YelviTt~---~GLy--------------RYr~GDvV~v~gf~~~~P~i~f~gR~~~~l 441 (599)
.++..|+.|||+|... .|+| .|+|||+++... .-.+.|+||.++++
T Consensus 391 -------------~~~~~g~~GEl~v~g~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~----dg~~~~~GR~d~~i 453 (559)
T PRK08315 391 -------------ETVPRGEQGELCTRGYSVMKGYWNDPEKTAEAIDADGWMHTGDLAVMDE----EGYVNIVGRIKDMI 453 (559)
T ss_pred -------------CcCCCCCceEEEEECchhhhhhcCChhHHhhcCCCCCCEEccceEEEcC----CceEEEEeeccceE
Confidence 2356899999999653 3443 399999999863 45799999999999
Q ss_pred eccccccCHHHHHHHHHH
Q 007532 442 SIESDKTDEAELQNAIDN 459 (599)
Q Consensus 442 ~~~GEk~~e~~v~~av~~ 459 (599)
++.|+++++.+|+++|.+
T Consensus 454 ~~~G~~v~~~eIE~~l~~ 471 (559)
T PRK08315 454 IRGGENIYPREIEEFLYT 471 (559)
T ss_pred EECCEEEcHHHHHHHHHh
Confidence 999999999999999975
No 72
>PRK12467 peptide synthase; Provisional
Probab=99.10 E-value=3.7e-09 Score=142.58 Aligned_cols=148 Identities=16% Similarity=0.223 Sum_probs=95.1
Q ss_pred CHHHHHHHHHHhccccccccccccCCCCceeEEEEecch---hhhHHHHHHHhCCCCCccccccccccccccccCCCCCC
Q 007532 277 NTELAEFIRMECSKENWERIITRIWPNTKYLDVIVTGAM---AQYIPTLDYYSGGKLPMACTMYASSECYFGLNLNPICR 353 (599)
Q Consensus 277 ~p~~A~~L~~~~~~~~~~g~~~~lWP~l~~l~~~~~g~~---~~y~~~l~~~~g~~~~~~~~~Y~asEg~i~i~~~~~~~ 353 (599)
.|..+..|.+..... ..+. ++.+++||. ....+++.+.+++ ++++ +.||.||+.+.+.......
T Consensus 754 ~Ps~~~~l~~~~~~~--------~~~~---lr~i~~gGe~l~~~~~~~~~~~~~~-~~l~-n~YG~TE~~~~~~~~~~~~ 820 (3956)
T PRK12467 754 VPSHLQALLQASRVA--------LPRP---QRALVCGGEALQVDLLARVRALGPG-ARLI-NHYGPTETTVGVSTYELSD 820 (3956)
T ss_pred CHHHHHHHHhhhccc--------cCCc---ccEEEEEeecCCHHHHHHHHHhCCC-CEEE-eCcCCChhhhheeeEeccc
Confidence 677777765433221 1233 467777774 3445666666655 8899 9999999865332111100
Q ss_pred CC------CCceeeecCceEEEEeeCCCCCCCCCCCCCCCCcccccCCCCCeEEEEEee---ccceec------------
Q 007532 354 PS------EVSYTIMPNMAYFEFLPQEPSDSFGLTSSDPQPVDLVDVEMGKEYELVITT---YAGLYR------------ 412 (599)
Q Consensus 354 ~~------~~~~~l~~~~~ffEFip~~~~~~~~~~~~~~~~l~~~ev~~G~~YelviTt---~~GLyR------------ 412 (599)
.. ..|. .+++.. +..++.+ ...|.+|+.|||+|+. ..|+|+
T Consensus 821 ~~~~~~~~~iG~-p~~~~~-~~i~d~~----------------~~~vp~G~~GEL~i~G~~v~~GYl~~p~~T~~~F~~~ 882 (3956)
T PRK12467 821 EERDFGNVPIGQ-PLANLG-LYILDHY----------------LNPVPVGVVGELYIGGAGLARGYHRRPALTAERFVPD 882 (3956)
T ss_pred ccccCCCCcccC-CcCCCE-EEEECCC----------------CCCCCCCCceEEEecccccchhhcCCccccHhhCcCC
Confidence 00 0111 122222 2222211 1246799999999975 355553
Q ss_pred ---------cccCCEEEEeeccCCCCEEEEEeecCceeeccccccCHHHHHHHHHH
Q 007532 413 ---------YRVGDILRVIGFHNSAPQFHFVRRKNVLLSIESDKTDEAELQNAIDN 459 (599)
Q Consensus 413 ---------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~GEk~~e~~v~~av~~ 459 (599)
|||||+++... ...++|+||.+++++++|++|.+.+|+.+|.+
T Consensus 883 p~~~~g~r~yrTGDl~~~~~----dG~l~~~GR~d~~vki~G~rI~~~eIE~~L~~ 934 (3956)
T PRK12467 883 PFGADGGRLYRTGDLARYRA----DGVIEYLGRMDHQVKIRGFRIELGEIEARLLA 934 (3956)
T ss_pred CCCCCCceeEecCceeEEcC----CCcEEEeccccCeEEECCEecCHHHHHHHHHh
Confidence 99999999973 46799999999999999999999999999965
No 73
>PRK07787 acyl-CoA synthetase; Validated
Probab=99.09 E-value=5.6e-09 Score=115.11 Aligned_cols=129 Identities=19% Similarity=0.291 Sum_probs=83.2
Q ss_pred eEEEEecch---hhhHHHHHHHhCCCCCccccccccccccccccCCCCC--CCCCCceeeecCceEEEEeeCCCCCCCCC
Q 007532 307 LDVIVTGAM---AQYIPTLDYYSGGKLPMACTMYASSECYFGLNLNPIC--RPSEVSYTIMPNMAYFEFLPQEPSDSFGL 381 (599)
Q Consensus 307 l~~~~~g~~---~~y~~~l~~~~g~~~~~~~~~Y~asEg~i~i~~~~~~--~~~~~~~~l~~~~~ffEFip~~~~~~~~~ 381 (599)
++.+++||. ...++.+++.++ ++++ +.||.||+.+.+...... .+...+.. .++. -.++++.+.
T Consensus 243 l~~~~~gg~~~~~~~~~~~~~~~~--~~~~-~~YG~tE~~~~~~~~~~~~~~~~~vG~~-~~g~-~~~i~d~~~------ 311 (471)
T PRK07787 243 ARLLVSGSAALPVPVFDRLAALTG--HRPV-ERYGMTETLITLSTRADGERRPGWVGLP-LAGV-ETRLVDEDG------ 311 (471)
T ss_pred eeEEEECCCCCCHHHHHHHHHHcC--CCee-cccCccccCcceecCCCCcccCCccccc-CCCc-EEEEECCCC------
Confidence 677888874 355677777775 6888 999999985432111110 01112221 2221 233333221
Q ss_pred CCCCCCCcccccCCCCC-eEEEEEee---cccee--------------ccccCCEEEEeeccCCCCEEEEEeec-Cceee
Q 007532 382 TSSDPQPVDLVDVEMGK-EYELVITT---YAGLY--------------RYRVGDILRVIGFHNSAPQFHFVRRK-NVLLS 442 (599)
Q Consensus 382 ~~~~~~~l~~~ev~~G~-~YelviTt---~~GLy--------------RYr~GDvV~v~gf~~~~P~i~f~gR~-~~~l~ 442 (599)
..+. ..|+ .|||+++. ..|+| -|+|||++++. ....+.++||. +++++
T Consensus 312 -----~~~~----~~~~~~Gei~v~g~~~~~gy~~~~~~t~~~~~~~~~~~TGDlg~~~----~dg~l~~~GR~~d~~i~ 378 (471)
T PRK07787 312 -----GPVP----HDGETVGELQVRGPTLFDGYLNRPDATAAAFTADGWFRTGDVAVVD----PDGMHRIVGRESTDLIK 378 (471)
T ss_pred -----CCCC----CCCCCceEEEEECcccchhhcCChhhchhcccCCCceecCceEEEc----CCCCEEEeCCCCceeEe
Confidence 1221 1343 79999985 34555 29999999986 34589999996 89999
Q ss_pred ccccccCHHHHHHHHHH
Q 007532 443 IESDKTDEAELQNAIDN 459 (599)
Q Consensus 443 ~~GEk~~e~~v~~av~~ 459 (599)
..|+|+++.+|+++|..
T Consensus 379 ~~G~~v~~~eIE~~l~~ 395 (471)
T PRK07787 379 SGGYRIGAGEIETALLG 395 (471)
T ss_pred eCCEEECHHHHHHHHHh
Confidence 99999999999999965
No 74
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=99.09 E-value=1.7e-09 Score=134.67 Aligned_cols=43 Identities=19% Similarity=0.329 Sum_probs=39.7
Q ss_pred cccCCEEEEeeccCCCCEEEEEeecCceeeccccccCHHHHHHHHHH
Q 007532 413 YRVGDILRVIGFHNSAPQFHFVRRKNVLLSIESDKTDEAELQNAIDN 459 (599)
Q Consensus 413 Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~GEk~~e~~v~~av~~ 459 (599)
|+|||++++.. ...+.|+||.+++++++|++|.+.+||.+|.+
T Consensus 680 y~TGDlg~~~~----dG~l~~~GR~dd~Iki~G~rI~p~eIE~~l~~ 722 (1389)
T TIGR03443 680 YRTGDLGRYLP----DGNVECCGRADDQVKIRGFRIELGEIDTHLSQ 722 (1389)
T ss_pred eecCCceeEcC----CCCEEEecccCCEEEeCcEEecHHHHHHHHHh
Confidence 99999999873 46899999999999999999999999999976
No 75
>PRK06188 acyl-CoA synthetase; Validated
Probab=99.07 E-value=3.4e-08 Score=110.19 Aligned_cols=129 Identities=16% Similarity=0.171 Sum_probs=83.4
Q ss_pred eeEEEEecch---hhhHHHHHHHhCCCCCccccccccccccccccCCCCCC--------CCCCceeeecCceEEEEeeCC
Q 007532 306 YLDVIVTGAM---AQYIPTLDYYSGGKLPMACTMYASSECYFGLNLNPICR--------PSEVSYTIMPNMAYFEFLPQE 374 (599)
Q Consensus 306 ~l~~~~~g~~---~~y~~~l~~~~g~~~~~~~~~Y~asEg~i~i~~~~~~~--------~~~~~~~l~~~~~ffEFip~~ 374 (599)
.++.+++||. ......+.+.++ .++. +.||+||+..++....... ....+. .+|+. -.+.++++
T Consensus 282 ~lr~~~~gg~~~~~~~~~~~~~~~~--~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~G~-p~~g~-~v~i~~~~ 356 (524)
T PRK06188 282 SLETVYYGASPMSPVRLAEAIERFG--PIFA-QYYGQTEAPMVITYLRKRDHDPDDPKRLTSCGR-PTPGL-RVALLDED 356 (524)
T ss_pred ceeEEEEcCCCCCHHHHHHHHHHhC--chhh-heeCccccCCceeecCchhccccccccCCcccc-ccCCc-EEEEEcCC
Confidence 3677777774 233455555565 4566 8999999843332111000 000111 12221 23444322
Q ss_pred CCCCCCCCCCCCCCcccccCCCCCeEEEEEeec---ccee-------------ccccCCEEEEeeccCCCCEEEEEeecC
Q 007532 375 PSDSFGLTSSDPQPVDLVDVEMGKEYELVITTY---AGLY-------------RYRVGDILRVIGFHNSAPQFHFVRRKN 438 (599)
Q Consensus 375 ~~~~~~~~~~~~~~l~~~ev~~G~~YelviTt~---~GLy-------------RYr~GDvV~v~gf~~~~P~i~f~gR~~ 438 (599)
..++..|+.+||+|++. .|+| .|+|||+++... ...+.|+||.+
T Consensus 357 ----------------~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGDl~~~~~----~g~~~~~GR~~ 416 (524)
T PRK06188 357 ----------------GREVAQGEVGEICVRGPLVMDGYWNRPEETAEAFRDGWLHTGDVAREDE----DGFYYIVDRKK 416 (524)
T ss_pred ----------------CCCCCCCCeeEEEEECcchhhhhcCChHHhhhhhcCCceeecceEEEcC----CccEEEEeccc
Confidence 12457899999999863 4444 399999999873 45789999999
Q ss_pred ceeeccccccCHHHHHHHHHH
Q 007532 439 VLLSIESDKTDEAELQNAIDN 459 (599)
Q Consensus 439 ~~l~~~GEk~~e~~v~~av~~ 459 (599)
+++++.|+++++.+|++++.+
T Consensus 417 ~~i~~~G~~i~~~~IE~~l~~ 437 (524)
T PRK06188 417 DMIVTGGFNVFPREVEDVLAE 437 (524)
T ss_pred cceecCCEEECHHHHHHHHHh
Confidence 999999999999999998865
No 76
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=99.05 E-value=2.9e-09 Score=123.02 Aligned_cols=132 Identities=12% Similarity=0.164 Sum_probs=82.3
Q ss_pred eEEEEecchh--hhHHHHHHHhCCCCCccccccccccccccccCCC-CC--CCCCCceeeecCceEEEEeeCCCCCCCCC
Q 007532 307 LDVIVTGAMA--QYIPTLDYYSGGKLPMACTMYASSECYFGLNLNP-IC--RPSEVSYTIMPNMAYFEFLPQEPSDSFGL 381 (599)
Q Consensus 307 l~~~~~g~~~--~y~~~l~~~~g~~~~~~~~~Y~asEg~i~i~~~~-~~--~~~~~~~~l~~~~~ffEFip~~~~~~~~~ 381 (599)
++.+++||+. +-..++...++. ++++ ++||+||+..++...+ .. ..+..|.. +|+.. .-+++.++.+
T Consensus 385 lr~~~~Ggapl~~~~~~~~~~~~~-~~l~-~~YG~TE~~~~~~~~~~~~~~~~gsvG~p-~p~~e-v~i~d~~~~g---- 456 (660)
T PLN02861 385 VRLLLSGAAPLPRHVEEFLRVTSC-SVLS-QGYGLTESCGGCFTSIANVFSMVGTVGVP-MTTIE-ARLESVPEMG---- 456 (660)
T ss_pred EEEEEECCCCCCHHHHHHHHHHcC-CCee-EecchhhhhhceeecccccCCCCCCccCc-cCceE-EEEEEccccC----
Confidence 7788888852 223344444554 5677 9999999743221111 00 01122221 22221 1223221110
Q ss_pred CCCCCCCcccccCCCCCeEEEEEee---ccceec-------------cccCCEEEEeeccCCCCEEEEEeecCceeec-c
Q 007532 382 TSSDPQPVDLVDVEMGKEYELVITT---YAGLYR-------------YRVGDILRVIGFHNSAPQFHFVRRKNVLLSI-E 444 (599)
Q Consensus 382 ~~~~~~~l~~~ev~~G~~YelviTt---~~GLyR-------------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~-~ 444 (599)
...+.+|..|||+|.. ..|+|+ |+|||+++++. ...+.|+||.||++++ .
T Consensus 457 ---------~~~~~~~~~GEi~vrGp~v~~GY~~~pe~T~~~f~dGw~~TGDlg~~d~----dG~l~i~GR~kd~Ik~~~ 523 (660)
T PLN02861 457 ---------YDALSDVPRGEICLRGNTLFSGYHKRQDLTEEVLIDGWFHTGDIGEWQP----NGAMKIIDRKKNIFKLSQ 523 (660)
T ss_pred ---------cccCCCCCceeEEEcCCcccccccCCHHHHHhhhhccCcccCceEEECC----CCcEEEEeccccceEcCC
Confidence 0122456679999964 578885 99999999983 4689999999999997 6
Q ss_pred ccccCHHHHHHHHHH
Q 007532 445 SDKTDEAELQNAIDN 459 (599)
Q Consensus 445 GEk~~e~~v~~av~~ 459 (599)
||+|++.+||+++.+
T Consensus 524 G~~I~p~eIE~~l~~ 538 (660)
T PLN02861 524 GEYVAVENLENTYSR 538 (660)
T ss_pred CeEEcHHHHHHHHhc
Confidence 999999999999965
No 77
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=99.05 E-value=8.4e-09 Score=120.46 Aligned_cols=130 Identities=18% Similarity=0.281 Sum_probs=82.5
Q ss_pred eEEEEecchh---hhHHHHHHHhCCCCCccccccccccccccccCCC-C-CCCCCCceeeecCceEEEEeeCCCCCCCCC
Q 007532 307 LDVIVTGAMA---QYIPTLDYYSGGKLPMACTMYASSECYFGLNLNP-I-CRPSEVSYTIMPNMAYFEFLPQEPSDSFGL 381 (599)
Q Consensus 307 l~~~~~g~~~---~y~~~l~~~~g~~~~~~~~~Y~asEg~i~i~~~~-~-~~~~~~~~~l~~~~~ffEFip~~~~~~~~~ 381 (599)
++.+++||+. ...+.++..+| ++++ ++||.||+...+...+ . ..++..|-.+.|.. -+..++.++..
T Consensus 463 lr~~~sGGapl~~~~~~~~~~~~g--~~i~-~gYGlTEt~~~~~~~~~~~~~~gsvG~p~~pg~-e~ki~d~~~~~---- 534 (746)
T PTZ00342 463 LEVILNGGGKLSPKIAEELSVLLN--VNYY-QGYGLTETTGPIFVQHADDNNTESIGGPISPNT-KYKVRTWETYK---- 534 (746)
T ss_pred eEEEEEcCCCCCHHHHHHHHHhcC--CCEE-EeeccCcccceeeeccCCCCCcccccCcCCCcE-EEEEecccccc----
Confidence 7788888853 44455656565 7888 9999999743221111 1 11112222211221 12222222110
Q ss_pred CCCCCCCcccccCCCCCeEEEEEee---ccceec--------------cccCCEEEEeeccCCCCEEEEEeecCceeec-
Q 007532 382 TSSDPQPVDLVDVEMGKEYELVITT---YAGLYR--------------YRVGDILRVIGFHNSAPQFHFVRRKNVLLSI- 443 (599)
Q Consensus 382 ~~~~~~~l~~~ev~~G~~YelviTt---~~GLyR--------------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~- 443 (599)
....+..|||+|.. ..|+|+ |+|||+++++. ...+.|+||.++++++
T Consensus 535 -----------~~~~~~~GEl~vrGp~v~~GY~~~pe~T~~~f~~dGW~~TGDig~~d~----dG~l~i~gR~kdlIkls 599 (746)
T PTZ00342 535 -----------ATDTLPKGELLIKSDSIFSGYFLEKEQTKNAFTEDGYFKTGDIVQINK----NGSLTFLDRSKGLVKLS 599 (746)
T ss_pred -----------cCCCCCceEEEEecCcccccccCChhhhhhhcCcCCcccCCcEEEECC----CCeEEEEccCCCeEEeC
Confidence 11234568999963 467775 99999999973 5689999999999996
Q ss_pred cccccCHHHHHHHHHH
Q 007532 444 ESDKTDEAELQNAIDN 459 (599)
Q Consensus 444 ~GEk~~e~~v~~av~~ 459 (599)
.||+|.+.+||+++.+
T Consensus 600 ~Ge~I~p~eIE~~l~~ 615 (746)
T PTZ00342 600 QGEYIETDMLNNLYSQ 615 (746)
T ss_pred CCEEEchHHHHHHHhc
Confidence 6999999999999965
No 78
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=99.04 E-value=2.9e-08 Score=109.29 Aligned_cols=146 Identities=15% Similarity=0.189 Sum_probs=90.4
Q ss_pred CHHHHHHHHHHhccccccccccccCCCCceeEEEEecch---hhhHHHHHHHhCCCCCccccccccccccccc-cCCCCC
Q 007532 277 NTELAEFIRMECSKENWERIITRIWPNTKYLDVIVTGAM---AQYIPTLDYYSGGKLPMACTMYASSECYFGL-NLNPIC 352 (599)
Q Consensus 277 ~p~~A~~L~~~~~~~~~~g~~~~lWP~l~~l~~~~~g~~---~~y~~~l~~~~g~~~~~~~~~Y~asEg~i~i-~~~~~~ 352 (599)
.|..+..|.+...+. + ++ ..+++++.||. ...++.++. .+ ++++ ..||+||....+ ...+..
T Consensus 236 ~P~~~~~l~~~~~~~-------~-~~--~~lr~~~~~g~~~~~~~~~~~~~-~~--~~~~-~~YG~tE~~~~~~~~~~~~ 301 (483)
T PRK03640 236 VSTMLQRLLERLGEG-------T-YP--SSFRCMLLGGGPAPKPLLEQCKE-KG--IPVY-QSYGMTETASQIVTLSPED 301 (483)
T ss_pred HHHHHHHHHhCcCcc-------c-cC--CcceEEEEcCCCCCHHHHHHHHH-hC--CCee-eeeccCcccccccccCccc
Confidence 677777765443321 1 11 13778877774 233444544 33 8888 899999963211 111110
Q ss_pred ---CCCCCceeeecCceEEEEeeCCCCCCCCCCCCCCCCcccccCCCCCeEEEEEeec---ccee-------------cc
Q 007532 353 ---RPSEVSYTIMPNMAYFEFLPQEPSDSFGLTSSDPQPVDLVDVEMGKEYELVITTY---AGLY-------------RY 413 (599)
Q Consensus 353 ---~~~~~~~~l~~~~~ffEFip~~~~~~~~~~~~~~~~l~~~ev~~G~~YelviTt~---~GLy-------------RY 413 (599)
.+...+. ..|+. |+.-.++. .++.+|+.+||++++. .|++ .|
T Consensus 302 ~~~~~~~vG~-p~~~~---~~~i~~~~---------------~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~ 362 (483)
T PRK03640 302 ALTKLGSAGK-PLFPC---ELKIEKDG---------------VVVPPFEEGEIVVKGPNVTKGYLNREDATRETFQDGWF 362 (483)
T ss_pred ccccCCCccc-ccCCc---EEEEecCC---------------CcCCCCCceEEEEECcchhhhhcCCHHHHHHHHhcCCe
Confidence 0111221 12221 11111110 2467899999999873 3443 48
Q ss_pred ccCCEEEEeeccCCCCEEEEEeecCceeeccccccCHHHHHHHHHH
Q 007532 414 RVGDILRVIGFHNSAPQFHFVRRKNVLLSIESDKTDEAELQNAIDN 459 (599)
Q Consensus 414 r~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~GEk~~e~~v~~av~~ 459 (599)
+|||++++.. ...+.|+||.++++++.|+++++.+|++++.+
T Consensus 363 ~tGDl~~~~~----~g~l~~~GR~~~~i~~~G~~v~~~~ie~~i~~ 404 (483)
T PRK03640 363 KTGDIGYLDE----EGFLYVLDRRSDLIISGGENIYPAEIEEVLLS 404 (483)
T ss_pred eccceEEEcC----CCCEEEeecccCeEEeCCEEECHHHHHHHHHh
Confidence 9999999874 45799999999999999999999999999965
No 79
>PRK07768 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.04 E-value=7.9e-08 Score=107.94 Aligned_cols=64 Identities=8% Similarity=0.051 Sum_probs=53.9
Q ss_pred cCCCCCeEEEEEeec---ccee-------------ccccCCEEEEeeccCCCCEEEEEeecCceeeccccccCHHHHHHH
Q 007532 393 DVEMGKEYELVITTY---AGLY-------------RYRVGDILRVIGFHNSAPQFHFVRRKNVLLSIESDKTDEAELQNA 456 (599)
Q Consensus 393 ev~~G~~YelviTt~---~GLy-------------RYr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~GEk~~e~~v~~a 456 (599)
.+.+|+.+||+++.. .|+| .|+|||++++.. ...+.|+||.+|++++.|+++++.+|+++
T Consensus 380 ~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGDl~~~~~----~g~l~~~GR~~d~i~~~G~~v~~~eiE~~ 455 (545)
T PRK07768 380 VLPPRGVGVIELRGESVTPGYLTMDGFIPAQDADGWLDTGDLGYLTE----EGEVVVCGRVKDVIIMAGRNIYPTDIERA 455 (545)
T ss_pred CCCCCCEEEEEEccCcccccccCCCCCcccccCCCeeeccceEEEec----CCEEEEEccccceEEECCEecCHHHHHHH
Confidence 457899999999752 4444 399999999873 45799999999999999999999999999
Q ss_pred HHHH
Q 007532 457 IDNA 460 (599)
Q Consensus 457 v~~a 460 (599)
|.+.
T Consensus 456 l~~~ 459 (545)
T PRK07768 456 AARV 459 (545)
T ss_pred HHhC
Confidence 9763
No 80
>PLN03052 acetate--CoA ligase; Provisional
Probab=99.04 E-value=6e-08 Score=113.32 Aligned_cols=43 Identities=16% Similarity=0.249 Sum_probs=39.3
Q ss_pred cccCCEEEEeeccCCCCEEEEEeecCceeeccccccCHHHHHHHHHH
Q 007532 413 YRVGDILRVIGFHNSAPQFHFVRRKNVLLSIESDKTDEAELQNAIDN 459 (599)
Q Consensus 413 Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~GEk~~e~~v~~av~~ 459 (599)
|++||+++++. ...+.|+||.+|+||+.|+++.+.||+++|..
T Consensus 591 ~~tGDl~~~d~----dG~l~i~GR~Dd~I~~~G~rI~~~EIE~~l~~ 633 (728)
T PLN03052 591 RRHGDIFERTS----GGYYRAHGRADDTMNLGGIKVSSVEIERVCNA 633 (728)
T ss_pred EecCceEEECC----CCeEEEEecCCCEEeeCCEEeCHHHHHHHHHh
Confidence 89999999983 46799999999999999999999999999964
No 81
>PRK06087 short chain acyl-CoA synthetase; Reviewed
Probab=99.04 E-value=1.1e-08 Score=115.02 Aligned_cols=128 Identities=15% Similarity=0.166 Sum_probs=82.9
Q ss_pred eeEEEEecchh---hhHHHHHHHhCCCCCcccccccccccc-ccccCCCCCC---CCCCceeeecCceEEEEeeCCCCCC
Q 007532 306 YLDVIVTGAMA---QYIPTLDYYSGGKLPMACTMYASSECY-FGLNLNPICR---PSEVSYTIMPNMAYFEFLPQEPSDS 378 (599)
Q Consensus 306 ~l~~~~~g~~~---~y~~~l~~~~g~~~~~~~~~Y~asEg~-i~i~~~~~~~---~~~~~~~l~~~~~ffEFip~~~~~~ 378 (599)
.++.+++||.. ...+.+... + ++++ +.||+||+. +++.....+. ....+. ..+ ...++.++++.
T Consensus 303 ~lr~i~~gG~~~~~~~~~~~~~~--~-~~l~-~~YG~TE~~~~~~~~~~~~~~~~~~~~G~-~~~-~~~~~i~d~~~--- 373 (547)
T PRK06087 303 ALRFFLCGGTTIPKKVARECQQR--G-IKLL-SVYGSTESSPHAVVNLDDPLSRFMHTDGY-AAA-GVEIKVVDEAR--- 373 (547)
T ss_pred CeEEEEEcCCCCCHHHHHHHHHc--C-CcEE-EEecccccCCccccCCCcchhhcCCcCCc-cCC-CceEEEEcCCC---
Confidence 37788888852 333444443 3 8888 999999973 2221111110 001111 122 23445554221
Q ss_pred CCCCCCCCCCcccccCCCCCeEEEEEee---cccee--------------ccccCCEEEEeeccCCCCEEEEEeecCcee
Q 007532 379 FGLTSSDPQPVDLVDVEMGKEYELVITT---YAGLY--------------RYRVGDILRVIGFHNSAPQFHFVRRKNVLL 441 (599)
Q Consensus 379 ~~~~~~~~~~l~~~ev~~G~~YelviTt---~~GLy--------------RYr~GDvV~v~gf~~~~P~i~f~gR~~~~l 441 (599)
.+|..|+.|||++.. ..|+| -|+|||++++.. ...+.|+||.++++
T Consensus 374 -------------~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~g~~~TGDl~~~~~----~g~l~i~GR~~d~i 436 (547)
T PRK06087 374 -------------KTLPPGCEGEEASRGPNVFMGYLDEPELTARALDEEGWYYSGDLCRMDE----AGYIKITGRKKDII 436 (547)
T ss_pred -------------CCCcCCCcceEEEecccccccccCCHHHHHHHhCCCCCcCcCceEEECC----CCCEEEEecchhhh
Confidence 245789999999954 23443 289999999873 46789999999999
Q ss_pred eccccccCHHHHHHHHHH
Q 007532 442 SIESDKTDEAELQNAIDN 459 (599)
Q Consensus 442 ~~~GEk~~e~~v~~av~~ 459 (599)
++.|+++++.+|+++|..
T Consensus 437 ~~~G~~v~p~~iE~~l~~ 454 (547)
T PRK06087 437 VRGGENISSREVEDILLQ 454 (547)
T ss_pred hcCCEEECHHHHHHHHHh
Confidence 999999999999999965
No 82
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=99.04 E-value=3.9e-08 Score=109.96 Aligned_cols=131 Identities=15% Similarity=0.182 Sum_probs=91.6
Q ss_pred ceeEEEEecch---hhhHHHHHHHhCCCCCcccccccccccc--ccccCCCCC-CCCCCceeeecCceEEEEeeCCCCCC
Q 007532 305 KYLDVIVTGAM---AQYIPTLDYYSGGKLPMACTMYASSECY--FGLNLNPIC-RPSEVSYTIMPNMAYFEFLPQEPSDS 378 (599)
Q Consensus 305 ~~l~~~~~g~~---~~y~~~l~~~~g~~~~~~~~~Y~asEg~--i~i~~~~~~-~~~~~~~~l~~~~~ffEFip~~~~~~ 378 (599)
..++.+.+||+ .+...++++.++. ..+. .+||.||.. +++|.+... .++.+|.. ++ +.-=.+..+..
T Consensus 299 ~sl~~v~~gga~~~~~~~~~~~~~l~~-~~v~-q~YGmTE~~~~~~~~~~~~e~k~~svG~~-~~--g~~~~v~~e~g-- 371 (537)
T KOG1176|consen 299 SSLRSVLSGGAPLSPATLEKVKERLPN-VTVI-QGYGMTEAGGLITSNDWGPERKPGSVGRL-LP--GVRVKVLDETG-- 371 (537)
T ss_pred CccEEEEecCCCCCHHHHHHHHHhCCC-ceEE-EeeccccccCceeecCCCccCcccccCcc-cc--ceEEEeeCCCC--
Confidence 33666655553 3566788888884 6666 999999984 455655442 22334442 33 21112222221
Q ss_pred CCCCCCCCCCcccccCCCCCeEEEEEee---ccceec--------------cccCCEEEEeeccCCCCEEEEEeecCcee
Q 007532 379 FGLTSSDPQPVDLVDVEMGKEYELVITT---YAGLYR--------------YRVGDILRVIGFHNSAPQFHFVRRKNVLL 441 (599)
Q Consensus 379 ~~~~~~~~~~l~~~ev~~G~~YelviTt---~~GLyR--------------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l 441 (599)
.++.+++.|||++-. ..|+|. |+|||+.-++ ....+.+++|.+|+|
T Consensus 372 -------------~~l~~~~~GEI~vrg~~imkGY~~NpeaT~~~~~~~GW~~TGDiGy~D----~DG~l~IvdR~KdlI 434 (537)
T KOG1176|consen 372 -------------VSLGPNQTGEICVRGPQVMKGYLKNPEATKEAFDDDGWFHTGDLGYFD----EDGYLYIVDRSKDLI 434 (537)
T ss_pred -------------CCCCCCCceEEEEECcccchhhcCChHHHHhhcccCCccccCceEEEc----CCCeEEEecchhhhe
Confidence 245788999999953 578887 9999996666 578999999999999
Q ss_pred eccccccCHHHHHHHHHH
Q 007532 442 SIESDKTDEAELQNAIDN 459 (599)
Q Consensus 442 ~~~GEk~~e~~v~~av~~ 459 (599)
+..|+++++.|||++|..
T Consensus 435 k~~G~qv~P~EiE~vL~~ 452 (537)
T KOG1176|consen 435 KYGGEQVSPAEIEAVLLT 452 (537)
T ss_pred eeCCEEeCHHHHHHHHHh
Confidence 999999999999999965
No 83
>PRK05850 acyl-CoA synthetase; Validated
Probab=99.04 E-value=8.7e-08 Score=108.46 Aligned_cols=64 Identities=19% Similarity=0.311 Sum_probs=53.8
Q ss_pred ccCCCCCeEEEEEeec---ccee-------------------------ccccCCEEEEeeccCCCCEEEEEeecCceeec
Q 007532 392 VDVEMGKEYELVITTY---AGLY-------------------------RYRVGDILRVIGFHNSAPQFHFVRRKNVLLSI 443 (599)
Q Consensus 392 ~ev~~G~~YelviTt~---~GLy-------------------------RYr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~ 443 (599)
.++++|+.|||+|... .|+| -|+|||++++. .-.+.|+||.++++++
T Consensus 390 ~~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~f~~~~~~~~~~~~~~~w~~TGDl~~~~-----~G~l~~~GR~~d~i~~ 464 (578)
T PRK05850 390 IECPAGTVGEIWVHGDNVAAGYWQKPEETERTFGATLVDPSPGTPEGPWLRTGDLGFIS-----EGELFIVGRIKDLLIV 464 (578)
T ss_pred cCCCCCCEEEEEEecCcccccccCChhhhHHHhhcccccccccCCCCCeeeccceeeEE-----CCEEEEEcccccEEEE
Confidence 3568999999999752 4554 38999999875 2489999999999999
Q ss_pred cccccCHHHHHHHHHHH
Q 007532 444 ESDKTDEAELQNAIDNA 460 (599)
Q Consensus 444 ~GEk~~e~~v~~av~~a 460 (599)
+|+++++.+||++|.+.
T Consensus 465 ~G~~i~p~eIE~~l~~~ 481 (578)
T PRK05850 465 DGRNHYPDDIEATIQEI 481 (578)
T ss_pred CCeecCHHHHHHHHHHh
Confidence 99999999999999763
No 84
>PRK12316 peptide synthase; Provisional
Probab=99.03 E-value=1.7e-08 Score=138.83 Aligned_cols=149 Identities=15% Similarity=0.113 Sum_probs=94.1
Q ss_pred CHHHHHHHHHHhccccccccccccCCCCceeEEEEecchh---hhHHHHHHHhCCCCCccccccccccccccccCCC---
Q 007532 277 NTELAEFIRMECSKENWERIITRIWPNTKYLDVIVTGAMA---QYIPTLDYYSGGKLPMACTMYASSECYFGLNLNP--- 350 (599)
Q Consensus 277 ~p~~A~~L~~~~~~~~~~g~~~~lWP~l~~l~~~~~g~~~---~y~~~l~~~~g~~~~~~~~~Y~asEg~i~i~~~~--- 350 (599)
.|..+..|....... ...|. ++++++||.. ...+++.+.+++ +.++ +.||.||+.+......
T Consensus 2243 ~P~~~~~l~~~~~~~-------~~~~~---lr~~~~gGe~l~~~~~~~~~~~~~~-~~l~-n~YG~TE~~~~~~~~~~~~ 2310 (5163)
T PRK12316 2243 PPVYLQQLAEHAERD-------GRPPA---VRVYCFGGEAVPAASLRLAWEALRP-VYLF-NGYGPTEAVVTPLLWKCRP 2310 (5163)
T ss_pred ChHHHHHHHhhhhcc-------cCCcc---eeEEEEecccCCHHHHHHHHHhCCC-cEEE-ECccchhheeeeeeeeccc
Confidence 677777665543221 12234 7788888843 334455555565 7888 9999999855321111
Q ss_pred CCCCC----CCceeeecCceEEEEeeCCCCCCCCCCCCCCCCcccccCCCCCeEEEEEee---ccceec-----------
Q 007532 351 ICRPS----EVSYTIMPNMAYFEFLPQEPSDSFGLTSSDPQPVDLVDVEMGKEYELVITT---YAGLYR----------- 412 (599)
Q Consensus 351 ~~~~~----~~~~~l~~~~~ffEFip~~~~~~~~~~~~~~~~l~~~ev~~G~~YelviTt---~~GLyR----------- 412 (599)
..+.. ..|.. +++.. .-.++.+ ...|.+|+.|||+|.. ..|+|.
T Consensus 2311 ~~~~~~~~~~iG~p-~~~~~-~~i~d~~----------------~~~vp~g~~GEl~i~G~~v~~GY~~~p~~T~~~f~~ 2372 (5163)
T PRK12316 2311 QDPCGAAYVPIGRA-LGNRR-AYILDAD----------------LNLLAPGMAGELYLGGEGLARGYLNRPGLTAERFVP 2372 (5163)
T ss_pred ccccCCCcCCcccc-cCCCE-EEEECCC----------------CCCCCCCCeeEEEecchhhcccccCChhhhhhhccC
Confidence 11000 01111 12111 1112111 1246799999999964 245442
Q ss_pred ----------cccCCEEEEeeccCCCCEEEEEeecCceeeccccccCHHHHHHHHHH
Q 007532 413 ----------YRVGDILRVIGFHNSAPQFHFVRRKNVLLSIESDKTDEAELQNAIDN 459 (599)
Q Consensus 413 ----------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~GEk~~e~~v~~av~~ 459 (599)
|||||++++.. ...+.|+||.+++++++|++|.+.|||.+|.+
T Consensus 2373 ~~~~~~~~~~yrTGDl~~~~~----dG~l~~~GR~d~~iki~G~rie~~eIE~~l~~ 2425 (5163)
T PRK12316 2373 DPFSASGERLYRTGDLARYRA----DGVVEYLGRIDHQVKIRGFRIELGEIEARLQA 2425 (5163)
T ss_pred CCCCCCCCeeEecccEEEEcC----CCcEEEecCCCCeEEEcCccCChHHHHHHHhh
Confidence 99999999973 56899999999999999999999999999976
No 85
>PRK09192 acyl-CoA synthetase; Validated
Probab=99.03 E-value=4.3e-08 Score=111.23 Aligned_cols=63 Identities=10% Similarity=0.103 Sum_probs=53.5
Q ss_pred cCCCCCeEEEEEee---cccee-------------ccccCCEEEEeeccCCCCEEEEEeecCceeeccccccCHHHHHHH
Q 007532 393 DVEMGKEYELVITT---YAGLY-------------RYRVGDILRVIGFHNSAPQFHFVRRKNVLLSIESDKTDEAELQNA 456 (599)
Q Consensus 393 ev~~G~~YelviTt---~~GLy-------------RYr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~GEk~~e~~v~~a 456 (599)
++..|+.+||+|+. ..|+| .|+|||++.+ . ...+.|+||.+|+++++|+++++.+||++
T Consensus 405 ~~~~g~~Gel~i~g~~~~~gY~~~~~~~~~~~~dgw~~TGDlg~~-~----~G~l~~~GR~dd~i~~~G~~v~p~eIE~~ 479 (579)
T PRK09192 405 PLPERVVGHICVRGPSLMSGYFRDEESQDVLAADGWLDTGDLGYL-L----DGYLYITGRAKDLIIINGRNIWPQDIEWI 479 (579)
T ss_pred CCCCCCEEEEEecCCchhhhhcCCccccccccCCceeeccceeeE-E----CCEEEEEeccccEEEECCCccCHHHHHHH
Confidence 45789999999975 35565 3899999987 3 35899999999999999999999999999
Q ss_pred HHHH
Q 007532 457 IDNA 460 (599)
Q Consensus 457 v~~a 460 (599)
|.+.
T Consensus 480 l~~~ 483 (579)
T PRK09192 480 AEQE 483 (579)
T ss_pred HHhc
Confidence 9874
No 86
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=99.03 E-value=5.3e-09 Score=121.54 Aligned_cols=132 Identities=15% Similarity=0.238 Sum_probs=83.4
Q ss_pred eEEEEecchh---hhHHHHHHHhCCCCCccccccccccccccccCCCCC--CCCCCceeeecCceEEEEeeCCCCCCCCC
Q 007532 307 LDVIVTGAMA---QYIPTLDYYSGGKLPMACTMYASSECYFGLNLNPIC--RPSEVSYTIMPNMAYFEFLPQEPSDSFGL 381 (599)
Q Consensus 307 l~~~~~g~~~---~y~~~l~~~~g~~~~~~~~~Y~asEg~i~i~~~~~~--~~~~~~~~l~~~~~ffEFip~~~~~~~~~ 381 (599)
++.+++||+. ...+.++..+| ++++ ++||.||+..++...... ..+..|- .+|+. -...+++++.+
T Consensus 422 lr~i~~GGapl~~~~~~~~~~~~g--~~v~-~~YG~TEt~~~~~~~~~~~~~~gsvG~-p~p~~-evkivd~~~~~---- 492 (696)
T PLN02387 422 IRFMLSGGAPLSGDTQRFINICLG--APIG-QGYGLTETCAGATFSEWDDTSVGRVGP-PLPCC-YVKLVSWEEGG---- 492 (696)
T ss_pred EEEEEEcCCCCCHHHHHHHHHHcC--CCee-EeechhhcccceeecCcccCCCCccCC-CCCce-EEEEeeccccC----
Confidence 7888888852 23344444565 7888 999999985432211111 1111222 12222 34445433221
Q ss_pred CCCCCCCcccccCCCCCeEEEEEee---cccee------------------ccccCCEEEEeeccCCCCEEEEEeecCce
Q 007532 382 TSSDPQPVDLVDVEMGKEYELVITT---YAGLY------------------RYRVGDILRVIGFHNSAPQFHFVRRKNVL 440 (599)
Q Consensus 382 ~~~~~~~l~~~ev~~G~~YelviTt---~~GLy------------------RYr~GDvV~v~gf~~~~P~i~f~gR~~~~ 440 (599)
..+.. +++..|||+|.. ..|+| -|+|||++++.. ...+.|+||.||+
T Consensus 493 -----~~~~~---~~~p~GEi~vrGp~v~~GY~~~pe~T~~~f~~d~~G~~W~~TGDig~~d~----dG~l~i~gR~kd~ 560 (696)
T PLN02387 493 -----YLISD---KPMPRGEIVIGGPSVTLGYFKNQEKTDEVYKVDERGMRWFYTGDIGQFHP----DGCLEIIDRKKDI 560 (696)
T ss_pred -----cccCC---CCCCCceEEeccCcccchhcCCHHHHhhhhccccCCCceeecCceEEECC----CCcEEEEEcccce
Confidence 11111 244568999964 46766 478999999973 4689999999999
Q ss_pred eec-cccccCHHHHHHHHHH
Q 007532 441 LSI-ESDKTDEAELQNAIDN 459 (599)
Q Consensus 441 l~~-~GEk~~e~~v~~av~~ 459 (599)
+++ .||+|++.+||+++.+
T Consensus 561 ik~~~Ge~I~p~eIE~~l~~ 580 (696)
T PLN02387 561 VKLQHGEYVSLGKVEAALSV 580 (696)
T ss_pred EECCCCeEEchHHHHHHHhc
Confidence 998 5999999999999865
No 87
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=99.03 E-value=5.8e-09 Score=118.75 Aligned_cols=142 Identities=15% Similarity=0.193 Sum_probs=82.8
Q ss_pred eEEEEecch-hhhHHHHHHHhCCCCCccccccccccccccccCCCCCCCCCCceeeec-CceEEEEeeCCCCCCCCCCCC
Q 007532 307 LDVIVTGAM-AQYIPTLDYYSGGKLPMACTMYASSECYFGLNLNPICRPSEVSYTIMP-NMAYFEFLPQEPSDSFGLTSS 384 (599)
Q Consensus 307 l~~~~~g~~-~~y~~~l~~~~g~~~~~~~~~Y~asEg~i~i~~~~~~~~~~~~~~l~~-~~~ffEFip~~~~~~~~~~~~ 384 (599)
++++..++. ....+.+.+.++. ..++ +.||+||+.+++.. ....++..+..... ... +.++..+...+. + -
T Consensus 316 l~~~~g~~l~~~~~~~~~~~~~~-~~l~-~~YG~tE~~~~~~~-~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~--~-i 388 (600)
T PRK08279 316 LRLMIGNGLRPDIWDEFQQRFGI-PRIL-EFYAASEGNVGFIN-VFNFDGTVGRVPLWLAHP-YAIVKYDVDTGE--P-V 388 (600)
T ss_pred eeEEecCCCCHHHHHHHHHHhCc-ceee-eeecccccceeecc-cCCCCccccccccccccc-ceeeeeccCcCc--e-e
Confidence 445444443 3456777777774 4577 99999998654321 11111222221110 001 122221111000 0 0
Q ss_pred CCCCcccccCCCCCeEEEEEe-----ecccee-------------------ccccCCEEEEeeccCCCCEEEEEeecCce
Q 007532 385 DPQPVDLVDVEMGKEYELVIT-----TYAGLY-------------------RYRVGDILRVIGFHNSAPQFHFVRRKNVL 440 (599)
Q Consensus 385 ~~~~l~~~ev~~G~~YelviT-----t~~GLy-------------------RYr~GDvV~v~gf~~~~P~i~f~gR~~~~ 440 (599)
....-.+.++.+|+.+|+++. ...|+. -|+|||++++.. ...+.|+||.+|+
T Consensus 389 ~~~~~~~~~~~~g~~Gel~~~i~~~~~~~GY~~~~~t~~~~~~~~~~~~~~~~~TGDlg~~~~----dG~l~~~GR~~d~ 464 (600)
T PRK08279 389 RDADGRCIKVKPGEVGLLIGRITDRGPFDGYTDPEASEKKILRDVFKKGDAWFNTGDLMRDDG----FGHAQFVDRLGDT 464 (600)
T ss_pred eCCCCccccCCCCCceeEEEEecCcccccccCCchhhHHHHhhcccCCCCceEeecceEEEcC----CccEEEecccCCe
Confidence 000111345789999999842 123321 189999999983 4579999999999
Q ss_pred eeccccccCHHHHHHHHHH
Q 007532 441 LSIESDKTDEAELQNAIDN 459 (599)
Q Consensus 441 l~~~GEk~~e~~v~~av~~ 459 (599)
++++|+++++.+||++|.+
T Consensus 465 ik~~G~~i~p~eIE~~l~~ 483 (600)
T PRK08279 465 FRWKGENVATTEVENALSG 483 (600)
T ss_pred EEECCcccCHHHHHHHHhc
Confidence 9999999999999999976
No 88
>PRK07769 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.02 E-value=1.4e-08 Score=116.56 Aligned_cols=64 Identities=17% Similarity=0.207 Sum_probs=54.1
Q ss_pred ccCCCCCeEEEEEee---cccee-------------------------------ccccCCEEEEeeccCCCCEEEEEeec
Q 007532 392 VDVEMGKEYELVITT---YAGLY-------------------------------RYRVGDILRVIGFHNSAPQFHFVRRK 437 (599)
Q Consensus 392 ~ev~~G~~YelviTt---~~GLy-------------------------------RYr~GDvV~v~gf~~~~P~i~f~gR~ 437 (599)
.++..|+.|||+|.. ..|+| -|+|||++++. ...+.|+||.
T Consensus 411 ~~~~~ge~GEl~v~gp~v~~GY~~~~~~t~~~f~~~~~~~~~~~~~~~~~~~~gw~~TGDlg~~~-----dG~l~i~GR~ 485 (631)
T PRK07769 411 SELPDGQIGEIWLHGNNIGTGYWGKPEETAATFQNILKSRLSESHAEGAPDDALWVRTGDYGVYF-----DGELYITGRV 485 (631)
T ss_pred cCCCCCCEEEEEecCCCccccccCChhHHHHHHhhhcccccccccccCcccCCCeeeccccccEE-----CCEEEEEccc
Confidence 357899999999974 34554 28999999885 3589999999
Q ss_pred CceeeccccccCHHHHHHHHHHH
Q 007532 438 NVLLSIESDKTDEAELQNAIDNA 460 (599)
Q Consensus 438 ~~~l~~~GEk~~e~~v~~av~~a 460 (599)
+++++++|++|++.+||.+|.+.
T Consensus 486 ~d~Ik~~G~~V~p~eIE~~l~~~ 508 (631)
T PRK07769 486 KDLVIIDGRNHYPQDLEYTAQEA 508 (631)
T ss_pred ccEEEECCeeeCHHHHHHHHHhc
Confidence 99999999999999999999763
No 89
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=99.01 E-value=1.4e-08 Score=118.47 Aligned_cols=44 Identities=16% Similarity=0.186 Sum_probs=39.5
Q ss_pred cccCCEEEEeeccCCCCEEEEEeecCceeeccccccCHHHHHHHHHHH
Q 007532 413 YRVGDILRVIGFHNSAPQFHFVRRKNVLLSIESDKTDEAELQNAIDNA 460 (599)
Q Consensus 413 Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~GEk~~e~~v~~av~~a 460 (599)
|+|||++++.. ...+.|+||.+|++++.|+++++.+||+++...
T Consensus 593 ~~TGDlg~~d~----dG~l~i~GR~~d~I~~~G~~V~p~eIE~~l~~~ 636 (718)
T PRK08043 593 YDTGDIVRFDE----QGFVQIQGRAKRFAKIAGEMVSLEMVEQLALGV 636 (718)
T ss_pred EecCCEEEEcC----CCcEEEEecCCCeeEeCcEEcCHHHHHHHHHhC
Confidence 89999999873 457999999999999999999999999998653
No 90
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.01 E-value=4.4e-08 Score=108.63 Aligned_cols=129 Identities=16% Similarity=0.105 Sum_probs=86.0
Q ss_pred CceeEEEEecch---hhhHHHHHHHhCCCCCccccccccccccc-cccCCCCC---CCCCCceeeecCceEEEEeeCCCC
Q 007532 304 TKYLDVIVTGAM---AQYIPTLDYYSGGKLPMACTMYASSECYF-GLNLNPIC---RPSEVSYTIMPNMAYFEFLPQEPS 376 (599)
Q Consensus 304 l~~l~~~~~g~~---~~y~~~l~~~~g~~~~~~~~~Y~asEg~i-~i~~~~~~---~~~~~~~~l~~~~~ffEFip~~~~ 376 (599)
+..+++++.||. ...++.+++.++ .+++ ..||+||+.. .+. ...+ .+...+..+ .+-++.++++.
T Consensus 261 ~~~lr~i~~~g~~~~~~~~~~~~~~~~--~~~~-~~yG~tE~~~~~~~-~~~~~~~~~~~~G~~~---~~~~~i~d~~~- 332 (502)
T PRK08276 261 VSSLRVAIHAAAPCPVEVKRAMIDWWG--PIIH-EYYASSEGGGVTVI-TSEDWLAHPGSVGKAV---LGEVRILDEDG- 332 (502)
T ss_pred cccceEEEecCCCCCHHHHHHHHHHhC--cHhh-hhcccccccceeEe-cCccccccCCCcceec---ccEEEEECCCC-
Confidence 344788888884 355677777775 5677 8999999842 211 1111 011122222 12333443211
Q ss_pred CCCCCCCCCCCCcccccCCCCCeEEEEEeec---ccee--------------ccccCCEEEEeeccCCCCEEEEEeecCc
Q 007532 377 DSFGLTSSDPQPVDLVDVEMGKEYELVITTY---AGLY--------------RYRVGDILRVIGFHNSAPQFHFVRRKNV 439 (599)
Q Consensus 377 ~~~~~~~~~~~~l~~~ev~~G~~YelviTt~---~GLy--------------RYr~GDvV~v~gf~~~~P~i~f~gR~~~ 439 (599)
..+..|+.|||+++.. .|+| .|+|||++++.. ...+.++||.++
T Consensus 333 ---------------~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~----~g~~~~~GR~~~ 393 (502)
T PRK08276 333 ---------------NELPPGEIGTVYFEMDGYPFEYHNDPEKTAAARNPHGWVTVGDVGYLDE----DGYLYLTDRKSD 393 (502)
T ss_pred ---------------CCCcCCCceEEEEECCCccchhcCCHHHHHHHhcCCCceeecceEEEcC----CcCEEEeccCcc
Confidence 2457899999999842 3333 378999999973 457999999999
Q ss_pred eeeccccccCHHHHHHHHHH
Q 007532 440 LLSIESDKTDEAELQNAIDN 459 (599)
Q Consensus 440 ~l~~~GEk~~e~~v~~av~~ 459 (599)
+++++|+++++.+|+.++.+
T Consensus 394 ~i~~~G~~v~~~~iE~~i~~ 413 (502)
T PRK08276 394 MIISGGVNIYPQEIENLLVT 413 (502)
T ss_pred eEEeCCEEeCHHHHHHHHHh
Confidence 99999999999999999965
No 91
>PRK13391 acyl-CoA synthetase; Provisional
Probab=99.01 E-value=4.3e-08 Score=109.16 Aligned_cols=128 Identities=16% Similarity=0.099 Sum_probs=85.6
Q ss_pred eeEEEEecch---hhhHHHHHHHhCCCCCccccccccccccc-cccCCCCC--CCCCCceeeecCceEEEEeeCCCCCCC
Q 007532 306 YLDVIVTGAM---AQYIPTLDYYSGGKLPMACTMYASSECYF-GLNLNPIC--RPSEVSYTIMPNMAYFEFLPQEPSDSF 379 (599)
Q Consensus 306 ~l~~~~~g~~---~~y~~~l~~~~g~~~~~~~~~Y~asEg~i-~i~~~~~~--~~~~~~~~l~~~~~ffEFip~~~~~~~ 379 (599)
.++.+++||. ....+.+++.+| .+++ ..||+||+.. .......+ .+...+. |..+..+.++.+.
T Consensus 276 ~l~~~~~gg~~~~~~~~~~~~~~~g--~~v~-~~YG~tE~~~~~~~~~~~~~~~~~~vG~---~~~g~~~i~d~~~---- 345 (511)
T PRK13391 276 SLEVAIHAAAPCPPQVKEQMIDWWG--PIIH-EYYAATEGLGFTACDSEEWLAHPGTVGR---AMFGDLHILDDDG---- 345 (511)
T ss_pred ceeEEEEccCCCCHHHHHHHHHHcC--Ccee-eeeccccccceEEecCccccccCCCcCC---cccceEEEECCCC----
Confidence 3777888774 355677777776 5677 9999999843 21111111 0111222 1112344444221
Q ss_pred CCCCCCCCCcccccCCCCCeEEEEEeec--cceec---------------cccCCEEEEeeccCCCCEEEEEeecCceee
Q 007532 380 GLTSSDPQPVDLVDVEMGKEYELVITTY--AGLYR---------------YRVGDILRVIGFHNSAPQFHFVRRKNVLLS 442 (599)
Q Consensus 380 ~~~~~~~~~l~~~ev~~G~~YelviTt~--~GLyR---------------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~ 442 (599)
.+++.|+.+||++... -|+|. |+|||++++.. ...+.|+||.+++++
T Consensus 346 ------------~~~~~g~~Gel~~~g~~~~gy~~~~~~~~~~~~~~~~w~~TGD~g~~~~----~g~l~~~gR~~~~i~ 409 (511)
T PRK13391 346 ------------AELPPGEPGTIWFEGGRPFEYLNDPAKTAEARHPDGTWSTVGDIGYVDE----DGYLYLTDRAAFMII 409 (511)
T ss_pred ------------CCCCCCCceEEEEecCcceEEcCChhHhHHhhccCCCEEecCCEEEECC----CccEEEeccCCCEEE
Confidence 1346899999999762 34443 78999998863 567999999999999
Q ss_pred ccccccCHHHHHHHHHH
Q 007532 443 IESDKTDEAELQNAIDN 459 (599)
Q Consensus 443 ~~GEk~~e~~v~~av~~ 459 (599)
+.|+++++.+|+++|.+
T Consensus 410 ~~G~~v~~~eie~~l~~ 426 (511)
T PRK13391 410 SGGVNIYPQEAENLLIT 426 (511)
T ss_pred eCCEEECHHHHHHHHHh
Confidence 99999999999999975
No 92
>PRK05857 acyl-CoA synthetase; Validated
Probab=99.01 E-value=7.1e-09 Score=116.55 Aligned_cols=154 Identities=16% Similarity=0.129 Sum_probs=93.5
Q ss_pred CHHHHHHHHHHhccccccccccccCCCCceeEEEEecchh---hhHHHHHHHhCCCCCccccccccccccc-cccCCCCC
Q 007532 277 NTELAEFIRMECSKENWERIITRIWPNTKYLDVIVTGAMA---QYIPTLDYYSGGKLPMACTMYASSECYF-GLNLNPIC 352 (599)
Q Consensus 277 ~p~~A~~L~~~~~~~~~~g~~~~lWP~l~~l~~~~~g~~~---~y~~~l~~~~g~~~~~~~~~Y~asEg~i-~i~~~~~~ 352 (599)
.|..+..|........ .-+|. ++.+.+||.. .....+ +.+| ++++ +.||+||+.. .++.....
T Consensus 267 ~P~~~~~l~~~~~~~~------~~~~~---lr~~~~gG~~~~~~~~~~~-~~~g--~~i~-~~YG~TE~~~~~~~~~~~~ 333 (540)
T PRK05857 267 VPTLLSKLVSELKSAN------ATVPS---LRLVGYGGSRAIAADVRFI-EATG--VRTA-QVYGLSETGCTALCLPTDD 333 (540)
T ss_pred ChHHHHHHHhccccCC------CcCcc---ceEEEEcCccCCchhHHHH-HHhC--Ceee-cccCCCcCCceeeeccccc
Confidence 6777777665443221 12344 6777777742 222323 3444 7888 9999999743 22110000
Q ss_pred ------CCCCCceeeecCceEEEEeeCCCCCCCCCCCCCCCCcccccCCCCCeEEEEEeec---ccee------------
Q 007532 353 ------RPSEVSYTIMPNMAYFEFLPQEPSDSFGLTSSDPQPVDLVDVEMGKEYELVITTY---AGLY------------ 411 (599)
Q Consensus 353 ------~~~~~~~~l~~~~~ffEFip~~~~~~~~~~~~~~~~l~~~ev~~G~~YelviTt~---~GLy------------ 411 (599)
.+...+. ..|+.. ..+++++.. ..+....+..|+.+||+|+.. .|+|
T Consensus 334 ~~~~~~~~~~~G~-~~~g~~-v~i~d~~~~----------~~~~~~~~~~~~~Gel~v~g~~~~~GY~~~~~~t~~~~~~ 401 (540)
T PRK05857 334 GSIVKIEAGAVGR-PYPGVD-VYLAATDGI----------GPTAPGAGPSASFGTLWIKSPANMLGYWNNPERTAEVLID 401 (540)
T ss_pred ccccccccCCcCc-ccCCcE-EEEECcccc----------CccccccCCCCCcceEEEeCcchhhhhhCCccchhhhcCC
Confidence 0111122 223222 222332211 122233456789999999863 4555
Q ss_pred -ccccCCEEEEeeccCCCCEEEEEeecCceeeccccccCHHHHHHHHHH
Q 007532 412 -RYRVGDILRVIGFHNSAPQFHFVRRKNVLLSIESDKTDEAELQNAIDN 459 (599)
Q Consensus 412 -RYr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~GEk~~e~~v~~av~~ 459 (599)
-|+|||++++. ....+.|+||.++++++.|+++++.+|+.+|..
T Consensus 402 g~~~TGDlg~~d----~~g~l~~~GR~~~~ik~~G~~v~p~eIE~~l~~ 446 (540)
T PRK05857 402 GWVNTGDLLERR----EDGFFYIKGRSSEMIICGGVNIAPDEVDRIAEG 446 (540)
T ss_pred CceeccceEEEc----CCceEEEeccccccEecCCEEECHHHHHHHHHh
Confidence 38999999986 356899999999999999999999999999965
No 93
>PRK13388 acyl-CoA synthetase; Provisional
Probab=99.01 E-value=2.6e-08 Score=112.09 Aligned_cols=127 Identities=18% Similarity=0.186 Sum_probs=79.9
Q ss_pred hhHHHHHHHhCCCCCccccccccccccccccCCCCCCCCCCceeeecCceEEEEeeCCCCCCCCCCCCCCCCccc--ccC
Q 007532 317 QYIPTLDYYSGGKLPMACTMYASSECYFGLNLNPICRPSEVSYTIMPNMAYFEFLPQEPSDSFGLTSSDPQPVDL--VDV 394 (599)
Q Consensus 317 ~y~~~l~~~~g~~~~~~~~~Y~asEg~i~i~~~~~~~~~~~~~~l~~~~~ffEFip~~~~~~~~~~~~~~~~l~~--~ev 394 (599)
.....+.+.++ ++++ +.||+||+...+...+..++...+..+ |+ .+++..+..... ....++- ..+
T Consensus 278 ~~~~~~~~~~~--~~l~-~~YG~tE~~~~~~~~~~~~~~~vG~p~-~g---~~i~~~~~~~~~-----~~~~~d~~g~~~ 345 (540)
T PRK13388 278 RDIAEFSRRFG--CQVE-DGYGSSEGAVIVVREPGTPPGSIGRGA-PG---VAIYNPETLTEC-----AVARFDAHGALL 345 (540)
T ss_pred HHHHHHHHHhC--Ccee-cccccccccceeecCCCCCCCCCCCCC-CC---cEEEcCCCCccc-----cceeccCccccc
Confidence 44566666675 7888 999999985332212222222334432 33 344443321100 0001110 011
Q ss_pred -CCCCeEEEEEe-e---cccee-------------ccccCCEEEEeeccCCCCEEEEEeecCceeeccccccCHHHHHHH
Q 007532 395 -EMGKEYELVIT-T---YAGLY-------------RYRVGDILRVIGFHNSAPQFHFVRRKNVLLSIESDKTDEAELQNA 456 (599)
Q Consensus 395 -~~G~~YelviT-t---~~GLy-------------RYr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~GEk~~e~~v~~a 456 (599)
..|+.|||+++ . ..|+| .|+|||+++.+. ...+.|+||.+++++++|+++++.+|+++
T Consensus 346 ~~~~~~GEl~v~~g~~~~~gY~~~~~~t~~~~~~g~~~TGD~~~~~~----dg~l~i~GR~~d~i~~~G~~v~p~eIE~~ 421 (540)
T PRK13388 346 NADEAIGELVNTAGAGFFEGYYNNPEATAERMRHGMYWSGDLAYRDA----DGWIYFAGRTADWMRVDGENLSAAPIERI 421 (540)
T ss_pred cCCCcceEEEEecCCcccccccCChHHHHHHhhcCceeccceEEEcC----CCcEEEeccCCceEEECCEEeCHHHHHHH
Confidence 35678999997 3 24565 399999999973 45799999999999999999999999999
Q ss_pred HHH
Q 007532 457 IDN 459 (599)
Q Consensus 457 v~~ 459 (599)
|.+
T Consensus 422 l~~ 424 (540)
T PRK13388 422 LLR 424 (540)
T ss_pred HHh
Confidence 865
No 94
>PRK12316 peptide synthase; Provisional
Probab=98.99 E-value=2.9e-09 Score=146.16 Aligned_cols=129 Identities=17% Similarity=0.186 Sum_probs=85.8
Q ss_pred eEEEEecchh---hhHHHHHHHhCCCCCccccccccccccccccCCCC----CCCCCCceeeecCceEEEEeeCCCCCCC
Q 007532 307 LDVIVTGAMA---QYIPTLDYYSGGKLPMACTMYASSECYFGLNLNPI----CRPSEVSYTIMPNMAYFEFLPQEPSDSF 379 (599)
Q Consensus 307 l~~~~~g~~~---~y~~~l~~~~g~~~~~~~~~Y~asEg~i~i~~~~~----~~~~~~~~~l~~~~~ffEFip~~~~~~~ 379 (599)
++.+++||.. ...+++.+.+++ ++++ +.||.||+.+++..... ......|.. +++.. +..++.+
T Consensus 772 l~~~~~gGe~l~~~~~~~~~~~~~~-~~l~-n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p-~~~~~-~~i~d~~----- 842 (5163)
T PRK12316 772 LRRIVCSGEALPADAQEQVFAKLPQ-AGLY-NLYGPTEAAIDVTHWTCVEEGGDSVPIGRP-IANLA-CYILDAN----- 842 (5163)
T ss_pred ccEEEEeeccCCHHHHHHHHHhCCC-CeEE-eCcCcChheeeeeEEecccccCCCCCCccc-cCCCE-EEEECCC-----
Confidence 6677777742 344555555655 8898 99999999653321110 000011221 22222 1122221
Q ss_pred CCCCCCCCCcccccCCCCCeEEEEEee---ccceec--------------------cccCCEEEEeeccCCCCEEEEEee
Q 007532 380 GLTSSDPQPVDLVDVEMGKEYELVITT---YAGLYR--------------------YRVGDILRVIGFHNSAPQFHFVRR 436 (599)
Q Consensus 380 ~~~~~~~~~l~~~ev~~G~~YelviTt---~~GLyR--------------------Yr~GDvV~v~gf~~~~P~i~f~gR 436 (599)
...|.+|+.|||+|.. ..|++. |+|||+++... ...+.|+||
T Consensus 843 -----------~~~~p~G~~GEl~i~G~~v~~GYl~~~~~t~~~f~~~~~~~~~~~y~TGDl~~~~~----dG~l~~~GR 907 (5163)
T PRK12316 843 -----------LEPVPVGVLGELYLAGRGLARGYHGRPGLTAERFVPSPFVAGERMYRTGDLARYRA----DGVIEYAGR 907 (5163)
T ss_pred -----------CCCCCCCCceEEEecccccChhhCCChhhhhhhCCCCCCCCCCeeEecCccEEECC----CCCEEeecc
Confidence 1246799999999964 345542 99999999983 468999999
Q ss_pred cCceeeccccccCHHHHHHHHHH
Q 007532 437 KNVLLSIESDKTDEAELQNAIDN 459 (599)
Q Consensus 437 ~~~~l~~~GEk~~e~~v~~av~~ 459 (599)
.+++++++|++|.+.|||++|.+
T Consensus 908 ~d~~ik~~G~rI~~~EIE~~l~~ 930 (5163)
T PRK12316 908 IDHQVKLRGLRIELGEIEARLLE 930 (5163)
T ss_pred cCCEEEEceEEcChHHHHHHHHh
Confidence 99999999999999999999976
No 95
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=98.98 E-value=8.9e-08 Score=106.62 Aligned_cols=128 Identities=20% Similarity=0.151 Sum_probs=80.8
Q ss_pred eEEEEecc-h-hhhHHHHHHHhCCCCCccccccccccccccccCC-CC--CCCCCCceeeecCceEEEEeeCCCCCCCCC
Q 007532 307 LDVIVTGA-M-AQYIPTLDYYSGGKLPMACTMYASSECYFGLNLN-PI--CRPSEVSYTIMPNMAYFEFLPQEPSDSFGL 381 (599)
Q Consensus 307 l~~~~~g~-~-~~y~~~l~~~~g~~~~~~~~~Y~asEg~i~i~~~-~~--~~~~~~~~~l~~~~~ffEFip~~~~~~~~~ 381 (599)
++++..|+ . ...+..+.+.++ ++++ +.||+||+....... +. +.....+. ..++ .-.+.++.+
T Consensus 290 l~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~G~-~~~g-~~~~i~d~~------- 357 (517)
T PRK08008 290 LREVMFYLNLSDQEKDAFEERFG--VRLL-TSYGMTETIVGIIGDRPGDKRRWPSIGR-PGFC-YEAEIRDDH------- 357 (517)
T ss_pred ceeeEEecCCCHHHHHHHHHHhC--CeEE-eeccccccccccccCCccccccCCcccc-CCCC-cEEEEECCC-------
Confidence 44444444 2 344566667665 7888 899999984322101 10 00001111 1111 123333321
Q ss_pred CCCCCCCcccccCCCCCeEEEEEeec------ccee--------------ccccCCEEEEeeccCCCCEEEEEeecCcee
Q 007532 382 TSSDPQPVDLVDVEMGKEYELVITTY------AGLY--------------RYRVGDILRVIGFHNSAPQFHFVRRKNVLL 441 (599)
Q Consensus 382 ~~~~~~~l~~~ev~~G~~YelviTt~------~GLy--------------RYr~GDvV~v~gf~~~~P~i~f~gR~~~~l 441 (599)
..++..|+.|||+++.. .|+| -|+|||++++.. ...+.|+||.++++
T Consensus 358 ---------~~~~~~g~~Gel~v~g~~~~~~~~gy~~~~~~~~~~~~~~g~~~TGDl~~~~~----~g~~~~~GR~~d~i 424 (517)
T PRK08008 358 ---------NRPLPAGEIGEICIKGVPGKTIFKEYYLDPKATAKVLEADGWLHTGDTGYVDE----EGFFYFVDRRCNMI 424 (517)
T ss_pred ---------CCCCCCCCcceEEEeCCCCcchhhhHhCChHHHhhcccCCCCeeccceEEECC----CCcEEEeecccceE
Confidence 12457899999999842 2333 289999988873 45899999999999
Q ss_pred eccccccCHHHHHHHHHH
Q 007532 442 SIESDKTDEAELQNAIDN 459 (599)
Q Consensus 442 ~~~GEk~~e~~v~~av~~ 459 (599)
++.|+++++.+|+.++.+
T Consensus 425 ~~~G~~i~p~~iE~~l~~ 442 (517)
T PRK08008 425 KRGGENVSCVELENIIAT 442 (517)
T ss_pred EeCCEEECHHHHHHHHHh
Confidence 999999999999999965
No 96
>PLN03102 acyl-activating enzyme; Provisional
Probab=98.97 E-value=2.3e-08 Score=113.64 Aligned_cols=59 Identities=15% Similarity=0.219 Sum_probs=51.2
Q ss_pred CCeEEEEEee---cccee-------------ccccCCEEEEeeccCCCCEEEEEeecCceeeccccccCHHHHHHHHHH
Q 007532 397 GKEYELVITT---YAGLY-------------RYRVGDILRVIGFHNSAPQFHFVRRKNVLLSIESDKTDEAELQNAIDN 459 (599)
Q Consensus 397 G~~YelviTt---~~GLy-------------RYr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~GEk~~e~~v~~av~~ 459 (599)
|+.|||+|+. ..|+| +|+|||++++. ....+.|+||.+|++++.|+++++.+|+.++.+
T Consensus 390 ~~~GEl~v~g~~~~~GY~~~~~~t~~~f~~gw~~TGDlg~~d----~dG~l~i~GR~~d~i~~~G~~v~p~eIE~~l~~ 464 (579)
T PLN03102 390 KTMGEIVIKGSSIMKGYLKNPKATSEAFKHGWLNTGDVGVIH----PDGHVEIKDRSKDIIISGGENISSVEVENVLYK 464 (579)
T ss_pred CCceEEEEECcchhhhhcCChhhhHhhhccCceecCceEEEc----CCCeEEEEeccCcEEEECCEEECHHHHHHHHHh
Confidence 3679999975 46666 49999999987 346899999999999999999999999999975
No 97
>PRK06178 acyl-CoA synthetase; Validated
Probab=98.96 E-value=1.6e-07 Score=106.03 Aligned_cols=121 Identities=18% Similarity=0.257 Sum_probs=78.7
Q ss_pred hhhHHHHHHHhCCCCCccccccccccccccccCCC--CCC-------CCCCceeeecCceEEEEeeCCCCCCCCCCCCCC
Q 007532 316 AQYIPTLDYYSGGKLPMACTMYASSECYFGLNLNP--ICR-------PSEVSYTIMPNMAYFEFLPQEPSDSFGLTSSDP 386 (599)
Q Consensus 316 ~~y~~~l~~~~g~~~~~~~~~Y~asEg~i~i~~~~--~~~-------~~~~~~~l~~~~~ffEFip~~~~~~~~~~~~~~ 386 (599)
....+.++..+|. .++...||+||......... .+. +...|. .+|+. -+++++++..
T Consensus 341 ~~~~~~~~~~~g~--~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~vG~-p~~g~-~v~v~d~~~~---------- 406 (567)
T PRK06178 341 PDYRQRWRALTGS--VLAEAAWGMTETHTCDTFTAGFQDDDFDLLSQPVFVGL-PVPGT-EFKICDFETG---------- 406 (567)
T ss_pred HHHHHHHHHHhCC--cccccccccccccccceeccccccCccccccCCccccc-ccCCc-EEEEEcCCCC----------
Confidence 3556677777764 55536799999732211111 000 001122 23333 2455554322
Q ss_pred CCcccccCCCCCeEEEEEeec---ccee-------------ccccCCEEEEeeccCCCCEEEEEeecCceeeccccccCH
Q 007532 387 QPVDLVDVEMGKEYELVITTY---AGLY-------------RYRVGDILRVIGFHNSAPQFHFVRRKNVLLSIESDKTDE 450 (599)
Q Consensus 387 ~~l~~~ev~~G~~YelviTt~---~GLy-------------RYr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~GEk~~e 450 (599)
..|..|+.|||+|+.. .|+| .|+|||++++.+ ...+.|+||.++++++.|+++++
T Consensus 407 -----~~~~~g~~Gel~v~g~~v~~gY~~~~~~~~~~~~dg~~~TGDl~~~~~----~g~l~i~GR~~d~i~~~G~~i~~ 477 (567)
T PRK06178 407 -----ELLPLGAEGEIVVRTPSLLKGYWNKPEATAEALRDGWLHTGDIGKIDE----QGFLHYLGRRKEMLKVNGMSVFP 477 (567)
T ss_pred -----CcCCCCCceEEEEECCcccccccCChhhhhhcccCCceeecceEEEec----CCeEEEEecccccEEECCEEECH
Confidence 1356889999999652 3433 389999999873 45799999999999999999999
Q ss_pred HHHHHHHHH
Q 007532 451 AELQNAIDN 459 (599)
Q Consensus 451 ~~v~~av~~ 459 (599)
.+|++++.+
T Consensus 478 ~eiE~~l~~ 486 (567)
T PRK06178 478 SEVEALLGQ 486 (567)
T ss_pred HHHHHHHHh
Confidence 999999865
No 98
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=98.96 E-value=8.6e-08 Score=106.58 Aligned_cols=128 Identities=16% Similarity=0.134 Sum_probs=84.0
Q ss_pred eEEEEecch---hhhHHHHHHHhCCCCCccccccccccccccccCCCCCC--CCCCceeeecCceEEEEeeCCCCCCCCC
Q 007532 307 LDVIVTGAM---AQYIPTLDYYSGGKLPMACTMYASSECYFGLNLNPICR--PSEVSYTIMPNMAYFEFLPQEPSDSFGL 381 (599)
Q Consensus 307 l~~~~~g~~---~~y~~~l~~~~g~~~~~~~~~Y~asEg~i~i~~~~~~~--~~~~~~~l~~~~~ffEFip~~~~~~~~~ 381 (599)
++.+++||. ....+.+++.++ ++++ ..||+||...........+ ....+. ..++ .-++.++ ++.
T Consensus 280 l~~~~~~G~~l~~~~~~~~~~~~~--~~v~-~~YG~tE~~~~~~~~~~~~~~~~~~G~-~~~g-~~v~i~d-~~~----- 348 (508)
T TIGR02262 280 LRLCTSAGEALPAEVGQRWQARFG--VDIV-DGIGSTEMLHIFLSNLPGDVRYGTSGK-PVPG-YRLRLVG-DGG----- 348 (508)
T ss_pred ceeEEEcCCCCCHHHHHHHHHHhC--Cchh-hCccccccCceeecCCccCCCCCCcCC-CCCC-cEEEEEC-CCC-----
Confidence 666666663 344566777775 7888 9999999842111111110 001111 1122 1245555 211
Q ss_pred CCCCCCCcccccCCCCCeEEEEEeec---ccee-------------ccccCCEEEEeeccCCCCEEEEEeecCceeeccc
Q 007532 382 TSSDPQPVDLVDVEMGKEYELVITTY---AGLY-------------RYRVGDILRVIGFHNSAPQFHFVRRKNVLLSIES 445 (599)
Q Consensus 382 ~~~~~~~l~~~ev~~G~~YelviTt~---~GLy-------------RYr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~G 445 (599)
..+.+|+.|||+|+.. .|+| .|+|||+.+... ...+.|+||.++++++.|
T Consensus 349 ----------~~~~~g~~Gel~i~~~~~~~gY~~~~~~~~~~~~~~~~~TGD~~~~~~----~g~~~~~gR~~d~i~~~G 414 (508)
T TIGR02262 349 ----------QDVAAGEPGELLISGPSSATMYWNNRAKTRDTFQGEWTRSGDKYVRND----DGSYTYAGRTDDMLKVSG 414 (508)
T ss_pred ----------CCCCCCCeeEEEEecCccccccCCCHHHhHhhhhcCceeccceEEEcC----CccEEEeccccceeeeCC
Confidence 1356899999999863 4554 379999988863 457999999999999999
Q ss_pred cccCHHHHHHHHHH
Q 007532 446 DKTDEAELQNAIDN 459 (599)
Q Consensus 446 Ek~~e~~v~~av~~ 459 (599)
+++++.+|+++|.+
T Consensus 415 ~~v~~~~ie~~l~~ 428 (508)
T TIGR02262 415 IYVSPFEIESALIQ 428 (508)
T ss_pred EEECHHHHHHHHHh
Confidence 99999999999965
No 99
>PRK05851 long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated
Probab=98.96 E-value=2.5e-08 Score=111.74 Aligned_cols=63 Identities=14% Similarity=0.209 Sum_probs=53.6
Q ss_pred cCCCCCeEEEEEee---ccceec---------cccCCEEEEeeccCCCCEEEEEeecCceeeccccccCHHHHHHHHHHH
Q 007532 393 DVEMGKEYELVITT---YAGLYR---------YRVGDILRVIGFHNSAPQFHFVRRKNVLLSIESDKTDEAELQNAIDNA 460 (599)
Q Consensus 393 ev~~G~~YelviTt---~~GLyR---------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~GEk~~e~~v~~av~~a 460 (599)
+|..|+.|||+|+. ..|+|. |+|||++++. ...+.|+||.+|++++.|+++++.+||++|.+.
T Consensus 366 ~~~~g~~GEl~v~g~~~~~GY~~~~~~~~~~~~~TGDl~~~~-----~G~l~~~GR~dd~i~~~G~~v~p~eIE~~l~~~ 440 (525)
T PRK05851 366 GVAGREIGEIEIRGASMMSGYLGQAPIDPDDWFPTGDLGYLV-----DGGLVVCGRAKELITVAGRNIFPTEIERVAAQV 440 (525)
T ss_pred cCCCCCeEEEEEecCchhhccccCCccCCCCceeccceEEEE-----CCEEEEEeecCCEEEECCEEeCHHHHHHHHHhC
Confidence 36789999999975 356664 9999999874 247999999999999999999999999999763
No 100
>PRK05691 peptide synthase; Validated
Probab=98.95 E-value=4.9e-08 Score=133.04 Aligned_cols=129 Identities=18% Similarity=0.188 Sum_probs=86.3
Q ss_pred eEEEEecch---hhhHHHHHHHhCCCCCccccccccccccccccCCC----CCCCCCCceeeecCceEEEEeeCCCCCCC
Q 007532 307 LDVIVTGAM---AQYIPTLDYYSGGKLPMACTMYASSECYFGLNLNP----ICRPSEVSYTIMPNMAYFEFLPQEPSDSF 379 (599)
Q Consensus 307 l~~~~~g~~---~~y~~~l~~~~g~~~~~~~~~Y~asEg~i~i~~~~----~~~~~~~~~~l~~~~~ffEFip~~~~~~~ 379 (599)
++.+++||. ....+++.+.+++ ++++ +.||.||+.+.+.... .......|.. +++. -...++.+
T Consensus 1390 lr~~~~gGe~l~~~~~~~~~~~~~~-~~l~-n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p-~~~~-~~~i~d~~----- 1460 (4334)
T PRK05691 1390 LRRLFSGGEALPAELRNRVLQRLPQ-VQLH-NRYGPTETAINVTHWQCQAEDGERSPIGRP-LGNV-LCRVLDAE----- 1460 (4334)
T ss_pred ccEEEEeecCCCHHHHHHHHHhCCC-cEEE-eCCCcChheeeeeeeecccccCCCCcccce-eCCC-EEEEECCC-----
Confidence 667778874 3445666666766 8888 9999999865332111 0000011221 2222 12233221
Q ss_pred CCCCCCCCCcccccCCCCCeEEEEEee---cccee---------------------ccccCCEEEEeeccCCCCEEEEEe
Q 007532 380 GLTSSDPQPVDLVDVEMGKEYELVITT---YAGLY---------------------RYRVGDILRVIGFHNSAPQFHFVR 435 (599)
Q Consensus 380 ~~~~~~~~~l~~~ev~~G~~YelviTt---~~GLy---------------------RYr~GDvV~v~gf~~~~P~i~f~g 435 (599)
...|.+|+.|||+|.. ..|++ -|||||+++... ...++|+|
T Consensus 1461 -----------~~~vp~G~~GEL~i~G~~v~~GYl~~p~~t~~~f~~~p~~~~~~r~yrTGDl~~~~~----dG~l~~~G 1525 (4334)
T PRK05691 1461 -----------LNLLPPGVAGELCIGGAGLARGYLGRPALTAERFVPDPLGEDGARLYRTGDRARWNA----DGALEYLG 1525 (4334)
T ss_pred -----------CCCCCCCCceEEEecCcccchhhcCCccccHhhCCCCCCCCCCceEEEccceEEECC----CCCEEEec
Confidence 1246799999999964 23433 289999999883 46899999
Q ss_pred ecCceeeccccccCHHHHHHHHHH
Q 007532 436 RKNVLLSIESDKTDEAELQNAIDN 459 (599)
Q Consensus 436 R~~~~l~~~GEk~~e~~v~~av~~ 459 (599)
|.+++++++|+++.+.+||.+|.+
T Consensus 1526 R~d~qiki~G~rie~~eIE~~l~~ 1549 (4334)
T PRK05691 1526 RLDQQVKLRGFRVEPEEIQARLLA 1549 (4334)
T ss_pred ccCcEEEECCEEcCHHHHHHHHHh
Confidence 999999999999999999999975
No 101
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=98.94 E-value=1.2e-07 Score=107.30 Aligned_cols=131 Identities=17% Similarity=0.180 Sum_probs=81.4
Q ss_pred eEEEEecch---hhhHHHHHHHhCCCCCccccccccccccccccCCCCC----CCCCCceee----ecCceEEEEeeCCC
Q 007532 307 LDVIVTGAM---AQYIPTLDYYSGGKLPMACTMYASSECYFGLNLNPIC----RPSEVSYTI----MPNMAYFEFLPQEP 375 (599)
Q Consensus 307 l~~~~~g~~---~~y~~~l~~~~g~~~~~~~~~Y~asEg~i~i~~~~~~----~~~~~~~~l----~~~~~ffEFip~~~ 375 (599)
+++++.||. ....+.++..++ ++++ +.||+||+.......... ......+.. .+...-++.++.
T Consensus 300 l~~~~~gG~~~~~~~~~~~~~~~~--~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~~-- 374 (576)
T PRK05620 300 LQEIYVGGSAVPPILIKAWEERYG--VDVV-HVWGMTETSPVGTVARPPSGVSGEARWAYRVSQGRFPASLEYRIVND-- 374 (576)
T ss_pred eeEEEEcCCCCCHHHHHHHHHHhC--Ccee-eeccccccccceeeeccCCccccccccccccccCCcCCceeEEEecC--
Confidence 677777774 345566666675 7888 999999984211111000 000000000 011122333332
Q ss_pred CCCCCCCCCCCCCcccccCCCCCeEEEEEee---cccee------------------------------ccccCCEEEEe
Q 007532 376 SDSFGLTSSDPQPVDLVDVEMGKEYELVITT---YAGLY------------------------------RYRVGDILRVI 422 (599)
Q Consensus 376 ~~~~~~~~~~~~~l~~~ev~~G~~YelviTt---~~GLy------------------------------RYr~GDvV~v~ 422 (599)
. ..+ +..+|+.|||+++. ..|+| -|+|||++++.
T Consensus 375 g----------~~~---~~~~~~~Gel~v~g~~~~~gY~~~~~~t~~~~~~~f~~~~~~~~~~~~~~~g~~~TGD~~~~~ 441 (576)
T PRK05620 375 G----------QVM---ESTDRNEGEIQVRGNWVTASYYHSPTEEGGGAASTFRGEDVEDANDRFTADGWLRTGDVGSVT 441 (576)
T ss_pred C----------ccc---cCCCCCceEEEEEcCcccccccCCccccccccccccccccchhhhcccccCCcEecCceEEEc
Confidence 1 111 12356789999975 23443 28999999987
Q ss_pred eccCCCCEEEEEeecCceeeccccccCHHHHHHHHHH
Q 007532 423 GFHNSAPQFHFVRRKNVLLSIESDKTDEAELQNAIDN 459 (599)
Q Consensus 423 gf~~~~P~i~f~gR~~~~l~~~GEk~~e~~v~~av~~ 459 (599)
. ...+.|+||.++++++.|+++.+.+|+++|.+
T Consensus 442 ~----dg~l~~~GR~~d~i~~~G~~i~~~eIE~~l~~ 474 (576)
T PRK05620 442 R----DGFLTIHDRARDVIRSGGEWIYSAQLENYIMA 474 (576)
T ss_pred C----CceEEEEechhhhhhcCCEEEcHHHHHHHHhc
Confidence 3 45899999999999999999999999999965
No 102
>PRK08308 acyl-CoA synthetase; Validated
Probab=98.94 E-value=9e-08 Score=103.85 Aligned_cols=58 Identities=12% Similarity=0.119 Sum_probs=50.5
Q ss_pred CCCeEEEEEeeccceeccccCCEEEEeeccCCCCEEEEEeecCceeeccccccCHHHHHHHHHH
Q 007532 396 MGKEYELVITTYAGLYRYRVGDILRVIGFHNSAPQFHFVRRKNVLLSIESDKTDEAELQNAIDN 459 (599)
Q Consensus 396 ~G~~YelviTt~~GLyRYr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~GEk~~e~~v~~av~~ 459 (599)
.|+.+|+++++..| +|+|||+++... ...+.|+||.++++++.|+++++.+|++++.+
T Consensus 278 ~~~~gel~v~~~~~--~~~TGDl~~~~~----dg~l~~~GR~~~~ik~~G~~v~p~eIE~~l~~ 335 (414)
T PRK08308 278 ENAPEEIVVKMGDK--EIFTKDLGYKSE----RGTLHFMGRMDDVINVSGLNVYPIEVEDVMLR 335 (414)
T ss_pred CCCCceEEEEcCCc--eEECCceEEECC----CccEEEecccCCeEEECCEEECHHHHHHHHHh
Confidence 46778999998766 477999999873 35799999999999999999999999999965
No 103
>KOG1175 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=98.93 E-value=2e-07 Score=104.80 Aligned_cols=253 Identities=14% Similarity=0.102 Sum_probs=144.9
Q ss_pred CHHHHHHHHHHhccccccccccccCCCCceeEEEEecch---hhhHHHHHHHhCCCCCcccccccccccc-ccccCCCCC
Q 007532 277 NTELAEFIRMECSKENWERIITRIWPNTKYLDVIVTGAM---AQYIPTLDYYSGGKLPMACTMYASSECY-FGLNLNPIC 352 (599)
Q Consensus 277 ~p~~A~~L~~~~~~~~~~g~~~~lWP~l~~l~~~~~g~~---~~y~~~l~~~~g~~~~~~~~~Y~asEg~-i~i~~~~~~ 352 (599)
.|...+.|++...+- + ..| +.+.|+++.++|. ..-...+.+.++. -|++ +.|+.||+. +-+.-.+..
T Consensus 338 ~pt~~r~l~~~~~~~-----~-~~~-~~~sLk~~~S~Gepi~~~~~ew~~~~~~~-~pv~-e~~~qtEtG~~~i~~~~g~ 408 (626)
T KOG1175|consen 338 APTAYRLLRRLGQED-----V-TSY-SLKSLRTCGSVGEPINPEAWEWWKRVTGL-DPIY-ETYGQTETGGICITPKPGK 408 (626)
T ss_pred ccHHHHHHHHhcccc-----c-ccc-ccceEEEEeecCccCCcchHHHHHHhcCc-cchh-hceeeeccCceeeeccCCC
Confidence 555566555544331 1 111 2245788887773 2334666677774 2677 999999982 222111111
Q ss_pred -CCCCCceeeecCce-EEEEeeCCCCCCCCCCCCCCCCcccccCCCC-CeEEEEEeec------cceec-----------
Q 007532 353 -RPSEVSYTIMPNMA-YFEFLPQEPSDSFGLTSSDPQPVDLVDVEMG-KEYELVITTY------AGLYR----------- 412 (599)
Q Consensus 353 -~~~~~~~~l~~~~~-ffEFip~~~~~~~~~~~~~~~~l~~~ev~~G-~~YelviTt~------~GLyR----------- 412 (599)
|. ..++.-.|..+ .++.++++ ..+++.+ +.+||+++.. .++|+
T Consensus 409 ~p~-~pg~~~~p~~g~~v~i~de~----------------g~~~~~~~~~G~l~~~~~~P~~~~r~~~~n~erf~~~yf~ 471 (626)
T KOG1175|consen 409 LPI-KPGSAGKPFPGYDVQILDEN----------------GNELPPSTGNGELRLKPPWPPGMFRTLWGNHERFRAAYFK 471 (626)
T ss_pred CCc-CccccCCCCCCcceEEECCC----------------CCCcCCCCceeEEEEeCCCCccccccccCCHHHhhhhhcc
Confidence 11 12222233333 23333331 1234444 7899999742 33444
Q ss_pred -----cccCCEEEEeeccCCCCEEEEEeecCceeeccccccCHHHHHHHHHHHHHHhhhcCCeEEeeEEeecCCCCCceE
Q 007532 413 -----YRVGDILRVIGFHNSAPQFHFVRRKNVLLSIESDKTDEAELQNAIDNASRLLREFNTSVGEYTSYANTKTIPGHY 487 (599)
Q Consensus 413 -----Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~GEk~~e~~v~~av~~a~~~l~~~g~~l~~f~~~~~~~~~p~hY 487 (599)
|.|||-++.+ +...|.+.||.+|+||+.|-+++..||++||.+.- + |.|=+|+.......|.-
T Consensus 472 k~pg~y~tGD~~~rd----~dGY~~i~GR~DDviNvsGhRigtaEIE~al~~hp-~-------VaEsAvVg~p~~~~ge~ 539 (626)
T KOG1175|consen 472 KFPGYYFTGDGGRRD----EDGYYWILGRVDDVINVSGHRIGTAEIESALVEHP-A-------VAESAVVGSPDPIKGEV 539 (626)
T ss_pred cCCceEEecCceEEc----CCceEEEEecccccccccceeecHHHHHHHHhhCc-c-------hhheeeecCCCCCCCeE
Confidence 9999999998 68899999999999999999999999999995532 1 22333332111122332
Q ss_pred -EEEEEEeecCCCCCCChHHHHHHHHHHHHHhChhhHhccccCCccCCeEEEEe----CCccHHHHHHHHHhcCCCCCCC
Q 007532 488 -VIYWELLIKDSANSPTNEVLNQCCLAMEECLNSVYRQGRVADNSIGPLEIRVV----RNGTFEELMDYAISRGASINQY 562 (599)
Q Consensus 488 -~l~~E~e~~~~~~~~~~~~l~~~~~~ld~~LN~~Y~~~R~~~g~l~p~~v~iv----~~gtF~~~~~~~~~~G~~~~Q~ 562 (599)
..|+-+.. + ..+. +.+.++|-..+ |...|-+..|+..+. +.=...+.+++.+.+-.+.-|+
T Consensus 540 v~aFvvl~~-g---~~~~---~~L~kel~~~V-------R~~igp~a~P~~I~~v~~LPkTrSGKimRr~lrki~~g~~~ 605 (626)
T KOG1175|consen 540 VLAFVVLKS-G---SHDP---EQLTKELVKHV-------RSVIGPYAVPRLIVFVPGLPKTRSGKIMRRALRKIASGKAV 605 (626)
T ss_pred EEEEEEEcC-C---CCCh---HHHHHHHHHHH-------HhhcCcccccceeEecCCCCccccchhHHHHHHHHhccCcc
Confidence 25555542 2 2222 23344555555 544444444444443 3333455666655443333389
Q ss_pred CCCcccCCHhHHHHHhccc
Q 007532 563 KVPRCVNFTPIVELLDSRT 581 (599)
Q Consensus 563 K~Pr~~~~~~~~~~L~~~~ 581 (599)
+-.-.+.|+++++.+.+.+
T Consensus 606 ~d~st~~dp~v~~~~~~~~ 624 (626)
T KOG1175|consen 606 GDTSTLADPSVIDHLRSIL 624 (626)
T ss_pred ccccccCChHHHHHHHHhh
Confidence 9999999999999988754
No 104
>PLN02430 long-chain-fatty-acid-CoA ligase
Probab=98.93 E-value=1.3e-08 Score=117.57 Aligned_cols=132 Identities=14% Similarity=0.220 Sum_probs=80.1
Q ss_pred eEEEEecchh--hhHHHHHHHhCCCCCccccccccccccc--cccCCC-CCCCCCCceeeecCceEEEEeeCCCCCCCCC
Q 007532 307 LDVIVTGAMA--QYIPTLDYYSGGKLPMACTMYASSECYF--GLNLNP-ICRPSEVSYTIMPNMAYFEFLPQEPSDSFGL 381 (599)
Q Consensus 307 l~~~~~g~~~--~y~~~l~~~~g~~~~~~~~~Y~asEg~i--~i~~~~-~~~~~~~~~~l~~~~~ffEFip~~~~~~~~~ 381 (599)
++.+++||+. +-..++-+.+++ ++++ ++||.||+.. .++... ...++..|- ..|+.. ....+.++.+
T Consensus 385 lr~~~~gga~l~~~~~~~~~~~~~-~~i~-~~YG~TE~~~~~~~~~~~~~~~~gsvG~-p~~~~e-vki~d~~~~g---- 456 (660)
T PLN02430 385 LRLLISGGAPLSTEIEEFLRVTSC-AFVV-QGYGLTETLGPTTLGFPDEMCMLGTVGA-PAVYNE-LRLEEVPEMG---- 456 (660)
T ss_pred EEEEEECCCCCCHHHHHHHHHhcC-CCee-eecchhhhhhceEeeccccCCCCCCccC-CCCceE-EEEEEcCCcC----
Confidence 7788888852 222333334454 6777 9999999742 222100 000111111 122111 1111111110
Q ss_pred CCCCCCCcccccCCCCCeEEEEEee---ccceec-------------cccCCEEEEeeccCCCCEEEEEeecCceeec-c
Q 007532 382 TSSDPQPVDLVDVEMGKEYELVITT---YAGLYR-------------YRVGDILRVIGFHNSAPQFHFVRRKNVLLSI-E 444 (599)
Q Consensus 382 ~~~~~~~l~~~ev~~G~~YelviTt---~~GLyR-------------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~-~ 444 (599)
..++..|..|||+|.. ..|+|+ |+|||++++.. ...+.|+||.++++++ .
T Consensus 457 ---------~~~~~~~~~GEi~vrg~~v~~GY~~~~e~t~~~~~dGw~~TGDig~~d~----dG~l~i~gR~kd~ik~~~ 523 (660)
T PLN02430 457 ---------YDPLGEPPRGEICVRGKCLFSGYYKNPELTEEVMKDGWFHTGDIGEILP----NGVLKIIDRKKNLIKLSQ 523 (660)
T ss_pred ---------cccCCCCCcceEEecCCCccccccCChHHhhhhhhccceeccceEEECC----CCcEEEEEcccccEEcCC
Confidence 0133456689999975 467774 89999999973 4589999999999997 5
Q ss_pred ccccCHHHHHHHHHH
Q 007532 445 SDKTDEAELQNAIDN 459 (599)
Q Consensus 445 GEk~~e~~v~~av~~ 459 (599)
||+|++.+||+++.+
T Consensus 524 G~~V~p~~IE~~l~~ 538 (660)
T PLN02430 524 GEYVALEYLENVYGQ 538 (660)
T ss_pred CcEEchHHHHHHHhc
Confidence 999999999998854
No 105
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism]
Probab=98.93 E-value=1.4e-08 Score=108.39 Aligned_cols=64 Identities=23% Similarity=0.393 Sum_probs=56.7
Q ss_pred ccCCCCCeEEEEEe---eccceec--------------cccCCEEEEeeccCCCCEEEEEeecCceeeccccccCHHHHH
Q 007532 392 VDVEMGKEYELVIT---TYAGLYR--------------YRVGDILRVIGFHNSAPQFHFVRRKNVLLSIESDKTDEAELQ 454 (599)
Q Consensus 392 ~ev~~G~~YelviT---t~~GLyR--------------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~GEk~~e~~v~ 454 (599)
.+++.|..|||++. |..|+|- |+|||+.++. ....++++||.+|||..+||+|++.|||
T Consensus 425 ~~v~~~~~Gel~iRGY~tMl~Ywg~~~kT~eti~~drW~~TGDi~~m~----enG~i~iVGRskdmI~rGGENVyP~ElE 500 (596)
T KOG1177|consen 425 SEVPLGTKGELLIRGYSTMLGYWGEEEKTKETIGNDRWYDTGDIAVMD----ENGTIEIVGRSKDMIIRGGENVYPTELE 500 (596)
T ss_pred CccccCCCceEEEEechhheeecCCcccchhhcccccceecCceEEEc----CCCcEEEEEcccCeEEeCCcccChHHHH
Confidence 45778888999994 6678887 9999999998 4678999999999999999999999999
Q ss_pred HHHHH
Q 007532 455 NAIDN 459 (599)
Q Consensus 455 ~av~~ 459 (599)
+.+.+
T Consensus 501 ~fL~~ 505 (596)
T KOG1177|consen 501 DFLNK 505 (596)
T ss_pred HHHhh
Confidence 99965
No 106
>PRK05691 peptide synthase; Validated
Probab=98.92 E-value=7.9e-08 Score=131.08 Aligned_cols=129 Identities=17% Similarity=0.248 Sum_probs=83.2
Q ss_pred eEEEEecchh---hhHHHHHHHhCCCCCccccccccccccccccC---CCCCCCCC---CceeeecCceEEEEeeCCCCC
Q 007532 307 LDVIVTGAMA---QYIPTLDYYSGGKLPMACTMYASSECYFGLNL---NPICRPSE---VSYTIMPNMAYFEFLPQEPSD 377 (599)
Q Consensus 307 l~~~~~g~~~---~y~~~l~~~~g~~~~~~~~~Y~asEg~i~i~~---~~~~~~~~---~~~~l~~~~~ffEFip~~~~~ 377 (599)
++.++.||.. ...+++.+.+++ +.++ +.||.||+.+.+.. +....... .|.. +++...+ .++ +.
T Consensus 3985 lr~~~~gGe~l~~~~~~~~~~~~~~-~~l~-n~YG~TE~t~~~~~~~~~~~~~~~~~~~iG~p-~~~~~~~-v~d--~~- 4057 (4334)
T PRK05691 3985 LRWMLPTGEAMPPELARQWLQRYPQ-IGLV-NAYGPAECSDDVAFFRVDLASTRGSYLPIGSP-TDNNRLY-LLD--EA- 4057 (4334)
T ss_pred ceEEEecCCcCCHHHHHHHHHhCCC-CeEE-eCccCccceeEEEEEEcccccccCCcCCCCCc-cCCCEEE-EEC--CC-
Confidence 6677777742 333444444555 8888 99999999654321 11110000 0110 1111111 011 11
Q ss_pred CCCCCCCCCCCcccccCCCCCeEEEEEee---ccceec---------------------cccCCEEEEeeccCCCCEEEE
Q 007532 378 SFGLTSSDPQPVDLVDVEMGKEYELVITT---YAGLYR---------------------YRVGDILRVIGFHNSAPQFHF 433 (599)
Q Consensus 378 ~~~~~~~~~~~l~~~ev~~G~~YelviTt---~~GLyR---------------------Yr~GDvV~v~gf~~~~P~i~f 433 (599)
...|.+|..|||+|+. ..|+++ |||||+++... ...|+|
T Consensus 4058 -------------~~~~p~g~~GEL~i~G~~v~~GY~~~~~~t~~~f~~~p~~~~~~~~yrTGDl~~~~~----dG~l~~ 4120 (4334)
T PRK05691 4058 -------------LELVPLGAVGELCVAGTGVGRGYVGDPLRTALAFVPHPFGAPGERLYRTGDLARRRS----DGVLEY 4120 (4334)
T ss_pred -------------CCCCCCCCceEEEEecccccccccCCcccchhhcccCCCCCCCceeeccCcceeecC----CCcEEE
Confidence 1236799999999974 355553 99999999973 457999
Q ss_pred EeecCceeeccccccCHHHHHHHHHH
Q 007532 434 VRRKNVLLSIESDKTDEAELQNAIDN 459 (599)
Q Consensus 434 ~gR~~~~l~~~GEk~~e~~v~~av~~ 459 (599)
+||.+++++++|.+|...|||++|.+
T Consensus 4121 ~GR~d~qvki~G~riel~eIE~~l~~ 4146 (4334)
T PRK05691 4121 VGRIDHQVKIRGYRIELGEIEARLHE 4146 (4334)
T ss_pred ecccCCcEEeceEEecHHHHHHHHHh
Confidence 99999999999999999999999865
No 107
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=98.90 E-value=3.2e-08 Score=106.77 Aligned_cols=115 Identities=20% Similarity=0.343 Sum_probs=76.8
Q ss_pred eEEEEecch---hhhHHHHHHHhCCCCCccccccccccccc-cccCC-CCC--CCCCCceeeecCceEEEEeeCCCCCCC
Q 007532 307 LDVIVTGAM---AQYIPTLDYYSGGKLPMACTMYASSECYF-GLNLN-PIC--RPSEVSYTIMPNMAYFEFLPQEPSDSF 379 (599)
Q Consensus 307 l~~~~~g~~---~~y~~~l~~~~g~~~~~~~~~Y~asEg~i-~i~~~-~~~--~~~~~~~~l~~~~~ffEFip~~~~~~~ 379 (599)
++.+++||. ...++++++.++. ++++ ..||+||+.. +.... ..+ .+...+ ..+| ..-++.+++++.
T Consensus 279 lr~v~~~G~~l~~~~~~~~~~~~~~-~~i~-~~YG~tE~~~~~~~~~~~~~~~~~~~~G-~~~~-~~~~~ivd~~~~--- 351 (417)
T PF00501_consen 279 LRTVISGGEPLPPDLLRRLRKAFGN-APII-NLYGSTETGSIATIRPPEDDIEKPGSVG-KPLP-GVEVKIVDPNTG--- 351 (417)
T ss_dssp -SEEEEESST-CHHHHHHHHHHHTT-SEEE-EEEEEGGGSSEEEEEETTTHHSSTTSEB-EEST-TEEEEEECTTTS---
T ss_pred ccccccccccCChhhcccccccccc-ccce-ecccccccceeeeccccccccccccccc-cccc-cccccccccccc---
Confidence 555555553 4667888888875 6788 9999999944 33110 111 111122 2344 345677765532
Q ss_pred CCCCCCCCCcccccCCCCCeEEEEEee---ccceec--------------cccCCEEEEeeccCCCCEEEEEeecCceee
Q 007532 380 GLTSSDPQPVDLVDVEMGKEYELVITT---YAGLYR--------------YRVGDILRVIGFHNSAPQFHFVRRKNVLLS 442 (599)
Q Consensus 380 ~~~~~~~~~l~~~ev~~G~~YelviTt---~~GLyR--------------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~ 442 (599)
..+++|+.|||+|+. ..|+|+ |+|||++++.. ...+.++||.+|+++
T Consensus 352 ------------~~~~~g~~Gei~i~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~g~~d~----~G~~~~~GR~~~~i~ 415 (417)
T PF00501_consen 352 ------------EPLPPGEPGEIVIRGPNVFSGYYNDPELTAEAFIDDGWYRTGDLGRLDE----DGYLYILGRSDDMIK 415 (417)
T ss_dssp ------------SBESTTSEEEEEEESTTSBSEETTBHHHHHHHEETTSEEEEEEEEEEET----TSEEEEEEEGSCEEE
T ss_pred ------------ccccccccccccccCCccceeeeccccccccccccccceecceEEEECC----CCeEEEEEeeCCEEE
Confidence 135799999999984 356555 99999999973 469999999999998
Q ss_pred cc
Q 007532 443 IE 444 (599)
Q Consensus 443 ~~ 444 (599)
++
T Consensus 416 ~~ 417 (417)
T PF00501_consen 416 VR 417 (417)
T ss_dssp ET
T ss_pred eC
Confidence 74
No 108
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=98.89 E-value=3.3e-08 Score=107.24 Aligned_cols=59 Identities=15% Similarity=0.245 Sum_probs=50.4
Q ss_pred CCeEEEEEeec---cceec-------------cccCCEEEEeeccCCCCEEEEEeecCceeeccccccCHHHHHHHHHH
Q 007532 397 GKEYELVITTY---AGLYR-------------YRVGDILRVIGFHNSAPQFHFVRRKNVLLSIESDKTDEAELQNAIDN 459 (599)
Q Consensus 397 G~~YelviTt~---~GLyR-------------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~GEk~~e~~v~~av~~ 459 (599)
++.+||++++. .|+|+ |+|||++++.. ...+.++||.+|++++.|++++..+|+++|.+
T Consensus 290 ~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~TGD~~~~~~----dg~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~ 364 (436)
T TIGR01923 290 EGHGEIMVKGANLMKGYLYQGELTPAFEQQGWFNTGDIGELDG----EGFLYVLGRRDDLIISGGENIYPEEIETVLYQ 364 (436)
T ss_pred CCceEEEEECCccchhhCCChhhhhhhhcCCCeeccceEEEcC----CCCEEEeccccCeEEeCCEeeCHHHHHHHHHh
Confidence 36789999863 45554 89999999984 46899999999999999999999999999965
No 109
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=98.89 E-value=6.1e-07 Score=102.62 Aligned_cols=64 Identities=16% Similarity=0.257 Sum_probs=54.0
Q ss_pred ccCCCCCeEEEEEee---cccee--------------------------------ccccCCEEEEeeccCCCCEEEEEee
Q 007532 392 VDVEMGKEYELVITT---YAGLY--------------------------------RYRVGDILRVIGFHNSAPQFHFVRR 436 (599)
Q Consensus 392 ~ev~~G~~YelviTt---~~GLy--------------------------------RYr~GDvV~v~gf~~~~P~i~f~gR 436 (599)
.++.+|+.|||+|.. ..|+| -|+|||+.++. ...+.|+||
T Consensus 422 ~~~~~g~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~~~~~~~~g~~~~~~~~~~~w~~TGDlg~~~-----dG~l~i~GR 496 (612)
T PRK12476 422 AELPDGEVGEIWLHGDNIGRGYWGRPEETERTFGAKLQSRLAEGSHADGAADDGTWLRTGDLGVYL-----DGELYITGR 496 (612)
T ss_pred cCCCCCCEEEEEEcCCcccccccCChHHHHHHHhhhhccccccccccccccCCCCeeeccccceeE-----CCEEEEEec
Confidence 456799999999964 35555 48999999764 357999999
Q ss_pred cCceeeccccccCHHHHHHHHHHH
Q 007532 437 KNVLLSIESDKTDEAELQNAIDNA 460 (599)
Q Consensus 437 ~~~~l~~~GEk~~e~~v~~av~~a 460 (599)
.+++++++|+++++.+||++|.+.
T Consensus 497 ~~d~I~~~G~~I~p~eIE~~l~~~ 520 (612)
T PRK12476 497 IADLIVIDGRNHYPQDIEATVAEA 520 (612)
T ss_pred cCcEEEECCcccCHHHHHHHHHHh
Confidence 999999999999999999999764
No 110
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.88 E-value=6.1e-08 Score=118.58 Aligned_cols=124 Identities=18% Similarity=0.202 Sum_probs=80.7
Q ss_pred eeEEEEecch---hhhHHHHHHHhCCCCCccccccccccccccccCCCC--CCCCCCceeeecCceEEEEeeCCCCCCCC
Q 007532 306 YLDVIVTGAM---AQYIPTLDYYSGGKLPMACTMYASSECYFGLNLNPI--CRPSEVSYTIMPNMAYFEFLPQEPSDSFG 380 (599)
Q Consensus 306 ~l~~~~~g~~---~~y~~~l~~~~g~~~~~~~~~Y~asEg~i~i~~~~~--~~~~~~~~~l~~~~~ffEFip~~~~~~~~ 380 (599)
.++.+.+||. ...++.+++.++ ++++ +.||+||+...+...+. ..+...+. ..|+..
T Consensus 908 ~lr~v~~gg~~l~~~~~~~~~~~~~--~~~~-~~YG~TE~~~~~~~~~~~~~~~~~vG~-p~~g~~-------------- 969 (1140)
T PRK06814 908 SLRYVFAGAEKVKEETRQTWMEKFG--IRIL-EGYGVTETAPVIALNTPMHNKAGTVGR-LLPGIE-------------- 969 (1140)
T ss_pred ceeEEEEcCCcCCHHHHHHHHHHhC--CcEE-eccccccccceEEecCCCCCCCCcCCc-cCCCCe--------------
Confidence 3778888885 345566666665 7888 99999998432211111 00111111 011110
Q ss_pred CCCCCCCCcccccC-CCCCeEEEEEeec---ccee--------------ccccCCEEEEeeccCCCCEEEEEeecCceee
Q 007532 381 LTSSDPQPVDLVDV-EMGKEYELVITTY---AGLY--------------RYRVGDILRVIGFHNSAPQFHFVRRKNVLLS 442 (599)
Q Consensus 381 ~~~~~~~~l~~~ev-~~G~~YelviTt~---~GLy--------------RYr~GDvV~v~gf~~~~P~i~f~gR~~~~l~ 442 (599)
+.+.++ ..|+.+||++... .|+| .|+|||+++++. ...+.|+||.+|+++
T Consensus 970 --------~~~~~~~~~~~~Gel~v~g~~~~~gY~~~~~~~~~~~~~~g~~~TGDl~~~d~----dG~l~~~GR~~d~i~ 1037 (1140)
T PRK06814 970 --------YRLEPVPGIDEGGRLFVRGPNVMLGYLRAENPGVLEPPADGWYDTGDIVTIDE----EGFITIKGRAKRFAK 1037 (1140)
T ss_pred --------EEEeecCCCCCceEEEEeCCCcchhhcCCCCCCccccCCCCeEecCCEEEECC----CCeEEEEecccCeee
Confidence 011111 1467789988642 4444 499999999973 568999999999999
Q ss_pred ccccccCHHHHHHHHHH
Q 007532 443 IESDKTDEAELQNAIDN 459 (599)
Q Consensus 443 ~~GEk~~e~~v~~av~~ 459 (599)
++|+++++.+||+++.+
T Consensus 1038 ~~G~~v~~~eIE~~l~~ 1054 (1140)
T PRK06814 1038 IAGEMISLAAVEELAAE 1054 (1140)
T ss_pred eCCEEECHHHHHHHHHh
Confidence 99999999999999865
No 111
>PRK07824 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=98.88 E-value=4.4e-07 Score=96.40 Aligned_cols=43 Identities=12% Similarity=0.099 Sum_probs=39.1
Q ss_pred ccccCCEEEEeeccCCCCEEEEEeecCceeeccccccCHHHHHHHHHH
Q 007532 412 RYRVGDILRVIGFHNSAPQFHFVRRKNVLLSIESDKTDEAELQNAIDN 459 (599)
Q Consensus 412 RYr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~GEk~~e~~v~~av~~ 459 (599)
+|+|||++++. ...+.|+||.+|+++++|+++++.+|+.+|.+
T Consensus 235 ~~~TGDl~~~~-----~g~l~i~GR~~d~i~~~G~~v~p~eIE~~l~~ 277 (358)
T PRK07824 235 WFRTDDLGALD-----DGVLTVLGRADDAISTGGLTVLPQVVEAALAT 277 (358)
T ss_pred ceecccEEEEe-----CCEEEEEeccCCeEEECCEEECHHHHHHHHHh
Confidence 79999999983 24789999999999999999999999999965
No 112
>PRK08180 feruloyl-CoA synthase; Reviewed
Probab=98.87 E-value=5.2e-08 Score=111.47 Aligned_cols=64 Identities=17% Similarity=0.290 Sum_probs=45.3
Q ss_pred CCCeEEEEEee---ccceec--------------cccCCEEEEeeccCCCCEEEEEeecCceeec-cccccC--HHHHHH
Q 007532 396 MGKEYELVITT---YAGLYR--------------YRVGDILRVIGFHNSAPQFHFVRRKNVLLSI-ESDKTD--EAELQN 455 (599)
Q Consensus 396 ~G~~YelviTt---~~GLyR--------------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~-~GEk~~--e~~v~~ 455 (599)
+|..+||+|.. ..|+|. |+|||++++.+-......+.|+||.++++++ .|+++. +.+++.
T Consensus 408 ~~~~GEi~vrg~~v~~GY~~~p~~t~~~~~~dgw~~TGDlg~~~~~~d~~g~l~i~GR~~d~i~~~~G~~i~~~p~Eie~ 487 (614)
T PRK08180 408 VGGKLEVRVKGPNVTPGYWRAPELTAEAFDEEGYYRSGDAVRFVDPADPERGLMFDGRIAEDFKLSSGTWVSVGPLRARA 487 (614)
T ss_pred CCCCcEEEEecCccchhhcCChhHhHhhcccCCceeccceEEecCCcCCCCceEEecchhhhEEcCCCcEecchhhhHHH
Confidence 45678999963 356653 8999999995210123468899999988875 699776 777777
Q ss_pred HHHH
Q 007532 456 AIDN 459 (599)
Q Consensus 456 av~~ 459 (599)
++..
T Consensus 488 ~l~~ 491 (614)
T PRK08180 488 VSAG 491 (614)
T ss_pred Hhhc
Confidence 7643
No 113
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=98.86 E-value=6e-08 Score=108.97 Aligned_cols=58 Identities=10% Similarity=0.193 Sum_probs=48.8
Q ss_pred CeEEEEEee---ccceec----------cccCCEEEEeeccCCCCEEEEEeecCceeeccccccCHHHHHHHHHH
Q 007532 398 KEYELVITT---YAGLYR----------YRVGDILRVIGFHNSAPQFHFVRRKNVLLSIESDKTDEAELQNAIDN 459 (599)
Q Consensus 398 ~~YelviTt---~~GLyR----------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~GEk~~e~~v~~av~~ 459 (599)
+.+||+++. ..|+|. |+|||+++... ...+.|+||.+|++++.|+|+++.+|++++..
T Consensus 383 ~~Gei~v~g~~~~~gy~~~~~~~~~~g~~~TGD~~~~~~----dg~l~~~GR~~d~i~~~G~~v~p~eIE~~l~~ 453 (539)
T PRK07008 383 AFGDLQVRGPWVIDRYFRGDASPLVDGWFPTGDVATIDA----DGFMQITDRSKDVIKSGGEWISSIDIENVAVA 453 (539)
T ss_pred cceEEEEeCCccchhhcCChhhhhcCCCcccCceEEEcC----CCcEEEeecccCEEEeCCeEEcHHHHHHHHHh
Confidence 568999985 244442 99999999874 45799999999999999999999999999965
No 114
>PRK12582 acyl-CoA synthetase; Provisional
Probab=98.85 E-value=2.4e-08 Score=114.44 Aligned_cols=61 Identities=20% Similarity=0.348 Sum_probs=47.0
Q ss_pred CCCCCeEEEEEee---ccceec--------------cccCCEEEEeeccCCCCEEEEEeecCceeec-cccccCHHHHH
Q 007532 394 VEMGKEYELVITT---YAGLYR--------------YRVGDILRVIGFHNSAPQFHFVRRKNVLLSI-ESDKTDEAELQ 454 (599)
Q Consensus 394 v~~G~~YelviTt---~~GLyR--------------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~-~GEk~~e~~v~ 454 (599)
+.+|+.|||+|.. ..|+|. |+|||++++.+-......+.|+||.+|++++ .|+|+.+.++|
T Consensus 418 ~~~G~~GEl~vrg~~v~~GY~~~p~~t~~~f~~dgw~~TGDlg~~~d~~~~~g~l~i~GR~~d~i~~~~G~~i~p~~iE 496 (624)
T PRK12582 418 APVGDKYEVRVKGPNVTPGYHKDPELTAAAFDEEGFYRLGDAARFVDPDDPEKGLIFDGRVAEDFKLSTGTWVSVGTLR 496 (624)
T ss_pred ccCCCceEEEEECCcccccccCCccchhhhcCccCCccccceEEecCCcCCCCceEEeccchhhEecCCCcEechHHHH
Confidence 3578999999965 466663 9999999985311123478999999999986 69999988885
No 115
>PRK07445 O-succinylbenzoic acid--CoA ligase; Reviewed
Probab=98.84 E-value=3.8e-08 Score=108.52 Aligned_cols=60 Identities=17% Similarity=0.236 Sum_probs=51.1
Q ss_pred CCCeEEEEEee---ccceec--------cccCCEEEEeeccCCCCEEEEEeecCceeeccccccCHHHHHHHHHH
Q 007532 396 MGKEYELVITT---YAGLYR--------YRVGDILRVIGFHNSAPQFHFVRRKNVLLSIESDKTDEAELQNAIDN 459 (599)
Q Consensus 396 ~G~~YelviTt---~~GLyR--------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~GEk~~e~~v~~av~~ 459 (599)
.|+.|||+|.. ..|+|. |+|||++++. ....+.|+||.+|++++.|+|+++.+||+++.+
T Consensus 298 ~g~~Gel~v~g~~~~~gY~~~~~~~~g~~~TGDl~~~d----~dG~l~~~GR~dd~I~~~G~~V~p~eIE~~l~~ 368 (452)
T PRK07445 298 ANQTGNITIQAQSLALGYYPQILDSQGIFETDDLGYLD----AQGYLHILGRNSQKIITGGENVYPAEVEAAILA 368 (452)
T ss_pred CCCcceEEEeCCccchhhcCCccCCCCEEECCCEEEEc----CCCCEEEEeecCCEEEECCEEECHHHHHHHHHh
Confidence 58899999953 355553 8999999986 345799999999999999999999999999976
No 116
>PRK07798 acyl-CoA synthetase; Validated
Probab=98.83 E-value=1.6e-07 Score=104.35 Aligned_cols=131 Identities=18% Similarity=0.075 Sum_probs=82.6
Q ss_pred eeEEEEecch---hhhHHHHHHHhCCCCCccccccccccccc-cccCCCCCCCCCCceeeecCceEEEEeeCCCCCCCCC
Q 007532 306 YLDVIVTGAM---AQYIPTLDYYSGGKLPMACTMYASSECYF-GLNLNPICRPSEVSYTIMPNMAYFEFLPQEPSDSFGL 381 (599)
Q Consensus 306 ~l~~~~~g~~---~~y~~~l~~~~g~~~~~~~~~Y~asEg~i-~i~~~~~~~~~~~~~~l~~~~~ffEFip~~~~~~~~~ 381 (599)
.++.+.+||. ......+++.+++ ++++ +.||+||... +......++....+-...+.. -.+.++.+.
T Consensus 297 ~l~~i~~gG~~~~~~~~~~~~~~~~~-~~~~-~~YG~tE~~~~~~~~~~~~~~~~g~~~~~~~~-~~~i~~~~~------ 367 (533)
T PRK07798 297 SLFAIASGGALFSPSVKEALLELLPN-VVLT-DSIGSSETGFGGSGTVAKGAVHTGGPRFTIGP-RTVVLDEDG------ 367 (533)
T ss_pred ceEEEEECCCCCCHHHHHHHHHHcCC-CeEE-eeecccccccccccCCCCCCccCCCCccCCCc-eEEEECCCC------
Confidence 3788888884 3455667777766 7888 9999999732 221111111111110112222 233443321
Q ss_pred CCCCCCCcccccCCCCCe--EEEEEeec--cce-----------------eccccCCEEEEeeccCCCCEEEEEeecCce
Q 007532 382 TSSDPQPVDLVDVEMGKE--YELVITTY--AGL-----------------YRYRVGDILRVIGFHNSAPQFHFVRRKNVL 440 (599)
Q Consensus 382 ~~~~~~~l~~~ev~~G~~--YelviTt~--~GL-----------------yRYr~GDvV~v~gf~~~~P~i~f~gR~~~~ 440 (599)
.++.+|+. ++++.+.. .|+ .-|+|||++++.. ...+.|+||.+++
T Consensus 368 ----------~~~~~g~~~~g~l~~~~~~~~gy~~~~~~t~~~f~~~~~~~~~~TGD~~~~~~----~g~l~~~GR~~~~ 433 (533)
T PRK07798 368 ----------NPVEPGSGEIGWIARRGHIPLGYYKDPEKTAETFPTIDGVRYAIPGDRARVEA----DGTITLLGRGSVC 433 (533)
T ss_pred ----------CCCCCCCCCeeEEEeecCccccccCChhhhHHhhccCCCCceEEcCcEEEEcC----CCcEEEEccccce
Confidence 12456665 77776531 121 2368999999873 4579999999999
Q ss_pred eeccccccCHHHHHHHHHH
Q 007532 441 LSIESDKTDEAELQNAIDN 459 (599)
Q Consensus 441 l~~~GEk~~e~~v~~av~~ 459 (599)
++++|+++++.+|++++.+
T Consensus 434 i~~~G~~v~~~eIE~~l~~ 452 (533)
T PRK07798 434 INTGGEKVFPEEVEEALKA 452 (533)
T ss_pred EecCCEEeCHHHHHHHHHh
Confidence 9999999999999999865
No 117
>PTZ00216 acyl-CoA synthetase; Provisional
Probab=98.81 E-value=8.3e-08 Score=111.69 Aligned_cols=129 Identities=12% Similarity=0.204 Sum_probs=80.1
Q ss_pred eEEEEecchh---hhHHHHHHHhCCCCCccccccccccccccccCCCC--CCCCCCceeeecCceEEEEeeCCCCCCCCC
Q 007532 307 LDVIVTGAMA---QYIPTLDYYSGGKLPMACTMYASSECYFGLNLNPI--CRPSEVSYTIMPNMAYFEFLPQEPSDSFGL 381 (599)
Q Consensus 307 l~~~~~g~~~---~y~~~l~~~~g~~~~~~~~~Y~asEg~i~i~~~~~--~~~~~~~~~l~~~~~ffEFip~~~~~~~~~ 381 (599)
++.+++||.. ...+.++..++ +++ ++||.||+......... ..+...|- .+|+.. +-.++.++..
T Consensus 430 lr~i~~GGa~l~~~~~~~~~~~~~---~l~-~~YG~TEt~~~~~~~~~~~~~~~svG~-p~~g~e-vkI~d~~~~~---- 499 (700)
T PTZ00216 430 VRAMLSGGGPLSAATQEFVNVVFG---MVI-QGWGLTETVCCGGIQRTGDLEPNAVGQ-LLKGVE-MKLLDTEEYK---- 499 (700)
T ss_pred EEEEEECCCCCCHHHHHHHHHHhh---hHh-hccCcccccccccccCCCCCCCCCcCC-cCCCeE-EEEeechhhc----
Confidence 7888888853 22333444343 677 99999998432111110 00111221 122221 1122222110
Q ss_pred CCCCCCCcccccCCCCCeEEEEEee---ccceec--------------cccCCEEEEeeccCCCCEEEEEeecCceee-c
Q 007532 382 TSSDPQPVDLVDVEMGKEYELVITT---YAGLYR--------------YRVGDILRVIGFHNSAPQFHFVRRKNVLLS-I 443 (599)
Q Consensus 382 ~~~~~~~l~~~ev~~G~~YelviTt---~~GLyR--------------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~-~ 443 (599)
..+.+|..|||+|.. ..|+|+ |+|||++++.. ...+.|+||.|++++ .
T Consensus 500 ----------~~~~~~~~GEL~vrG~~v~~GY~~~pe~T~~~f~~dGw~~TGDig~~d~----dG~l~i~GR~kd~ik~~ 565 (700)
T PTZ00216 500 ----------HTDTPEPRGEILLRGPFLFKGYYKQEELTREVLDEDGWFHTGDVGSIAA----NGTLRIIGRVKALAKNC 565 (700)
T ss_pred ----------cCCCCCCCceEEEcCCcccchhcCChhHhhhhccccCCeeccceEEEcC----CCcEEEEEehHhheecC
Confidence 013456678999964 467764 89999999973 568999999999997 8
Q ss_pred cccccCHHHHHHHHHH
Q 007532 444 ESDKTDEAELQNAIDN 459 (599)
Q Consensus 444 ~GEk~~e~~v~~av~~ 459 (599)
.|++|.+.+||+++.+
T Consensus 566 ~G~~I~p~eIE~~l~~ 581 (700)
T PTZ00216 566 LGEYIALEALEALYGQ 581 (700)
T ss_pred CCceeccHHHHHHHhc
Confidence 9999999999999965
No 118
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism]
Probab=98.78 E-value=4.4e-08 Score=110.76 Aligned_cols=133 Identities=16% Similarity=0.372 Sum_probs=94.6
Q ss_pred eEEEEecchhhhHHHHHHH--hCCCCCccccccccccccccccCCCCCCCCCCceeeecCceEEEEeeCCCCCCCCCCCC
Q 007532 307 LDVIVTGAMAQYIPTLDYY--SGGKLPMACTMYASSECYFGLNLNPICRPSEVSYTIMPNMAYFEFLPQEPSDSFGLTSS 384 (599)
Q Consensus 307 l~~~~~g~~~~y~~~l~~~--~g~~~~~~~~~Y~asEg~i~i~~~~~~~~~~~~~~l~~~~~ffEFip~~~~~~~~~~~~ 384 (599)
++..++||+.--.+.+..+ .| +++. ++||.||..-+++.++ ++ .|.+ +..+
T Consensus 355 i~~~~sGGa~l~~~~~~f~~~lG--i~i~-eGYGlTEts~~~~v~~---~~-------------~~~~-gtvG------- 407 (613)
T COG1022 355 IRYALSGGAPLSPELLHFFRSLG--IPIL-EGYGLTETSAVVSVNP---PD-------------RFVL-GTVG------- 407 (613)
T ss_pred EEEEEecCCcCCHHHHHHHHHcC--CCeE-EEecccccccceEEcc---cc-------------Cccc-CCcC-------
Confidence 6788888864222333332 34 8999 9999999854443332 11 1122 1111
Q ss_pred CCCCcccccCCCCCeEEEEEee---ccceec--------------cccCCEEEEeeccCCCCEEEEEeecCceeecc-cc
Q 007532 385 DPQPVDLVDVEMGKEYELVITT---YAGLYR--------------YRVGDILRVIGFHNSAPQFHFVRRKNVLLSIE-SD 446 (599)
Q Consensus 385 ~~~~l~~~ev~~G~~YelviTt---~~GLyR--------------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~-GE 446 (599)
.+++..|++.++.+||.|.+ ..|+|. |+|||+..++. ...+.++||.|+++.+. ||
T Consensus 408 --~p~p~~evKI~d~GEilVRG~~Vm~GYyk~pe~Taeaf~~DGWf~TGDlg~~d~----~g~L~i~gRkK~~i~l~~Gk 481 (613)
T COG1022 408 --KPLPGIEVKIADDGEILVRGPNVMKGYYKNPEATAEAFTEDGWFRTGDLGELDE----DGYLVITGRKKELIKLSNGK 481 (613)
T ss_pred --CcCCCceEEEccCceEEEecchhcchhcCChHHHhhhccccCCcccCceeEEcC----CCcEEEeecccceEECCCCc
Confidence 36667789999999999976 589999 99999999994 48999999999998876 99
Q ss_pred ccCHHHHHHHHHHHHHHhhhcCCeEEeeEEeecC
Q 007532 447 KTDEAELQNAIDNASRLLREFNTSVGEYTSYANT 480 (599)
Q Consensus 447 k~~e~~v~~av~~a~~~l~~~g~~l~~f~~~~~~ 480 (599)
++.++-||+++.+ .--|...+++.+.
T Consensus 482 nIaP~~IE~~l~~--------~~~I~qi~vvg~~ 507 (613)
T COG1022 482 NIAPEPIESKLAK--------SPLIEQICVVGDD 507 (613)
T ss_pred ccChHHHHHHHhc--------CCCeeEEEEEecC
Confidence 9999999997743 2345566666643
No 119
>PLN02479 acetate-CoA ligase
Probab=98.74 E-value=2.5e-07 Score=104.66 Aligned_cols=58 Identities=14% Similarity=0.196 Sum_probs=49.7
Q ss_pred CeEEEEEee---cccee-------------ccccCCEEEEeeccCCCCEEEEEeecCceeeccccccCHHHHHHHHHH
Q 007532 398 KEYELVITT---YAGLY-------------RYRVGDILRVIGFHNSAPQFHFVRRKNVLLSIESDKTDEAELQNAIDN 459 (599)
Q Consensus 398 ~~YelviTt---~~GLy-------------RYr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~GEk~~e~~v~~av~~ 459 (599)
+.|||+++. ..|+| .|+|||++++. ....+.|+||.++++++.|+++++.+|+.++.+
T Consensus 401 ~~GEl~v~g~~~~~GY~~~~~~t~~~~~~g~~~TGDl~~~~----~~g~l~~~GR~~d~i~~~G~~v~~~eIE~~l~~ 474 (567)
T PLN02479 401 TMGEIVMRGNMVMKGYLKNPKANEEAFANGWFHSGDLGVKH----PDGYIEIKDRSKDIIISGGENISSLEVENVVYT 474 (567)
T ss_pred CceEEEEeccchhhhhhcCcccccchhcCCceecceeEEEc----CCccEEEeccccceEEeCCEEEcHHHHHHHHHh
Confidence 579999985 34555 39999999987 346799999999999999999999999999965
No 120
>PRK06018 putative acyl-CoA synthetase; Provisional
Probab=98.73 E-value=3.6e-07 Score=102.69 Aligned_cols=58 Identities=16% Similarity=0.211 Sum_probs=48.9
Q ss_pred CeEEEEEee---ccceec-----------cccCCEEEEeeccCCCCEEEEEeecCceeeccccccCHHHHHHHHHH
Q 007532 398 KEYELVITT---YAGLYR-----------YRVGDILRVIGFHNSAPQFHFVRRKNVLLSIESDKTDEAELQNAIDN 459 (599)
Q Consensus 398 ~~YelviTt---~~GLyR-----------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~GEk~~e~~v~~av~~ 459 (599)
..+||++.. ..|+|. |+|||++++.. .-.+.|+||.++++++.|+++++.+|+.++.+
T Consensus 383 ~~Gel~i~g~~~~~gy~~~~~~~~~~~~~~~TGDl~~~~~----~g~~~~~GR~~d~i~~~G~~v~~~eIE~~l~~ 454 (542)
T PRK06018 383 TFGRLKVRGPAVAAAYYRVDGEILDDDGFFDTGDVATIDA----YGYMRITDRSKDVIKSGGEWISSIDLENLAVG 454 (542)
T ss_pred ceeEEEEecCCcchhhhcCcccEecCCcEEEcCCEEEEcC----CccEEEEecCCCeEEECCEEECHHHHHHHHHh
Confidence 579999963 345664 99999999863 45799999999999999999999999999865
No 121
>PRK08162 acyl-CoA synthetase; Validated
Probab=98.71 E-value=5.7e-07 Score=100.92 Aligned_cols=58 Identities=10% Similarity=0.221 Sum_probs=49.8
Q ss_pred CeEEEEEee---ccceec-------------cccCCEEEEeeccCCCCEEEEEeecCceeeccccccCHHHHHHHHHH
Q 007532 398 KEYELVITT---YAGLYR-------------YRVGDILRVIGFHNSAPQFHFVRRKNVLLSIESDKTDEAELQNAIDN 459 (599)
Q Consensus 398 ~~YelviTt---~~GLyR-------------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~GEk~~e~~v~~av~~ 459 (599)
+.|||+|+. ..|+|. |+|||++++.. ...+.|+||.++++++.|+++++.+|+.+|.+
T Consensus 387 ~~Gel~v~g~~~~~gY~~~~~~~~~~~~~g~~~TGDl~~~d~----dg~l~~~GR~~~~i~~~G~~v~~~eIE~~l~~ 460 (545)
T PRK08162 387 TIGEIMFRGNIVMKGYLKNPKATEEAFAGGWFHTGDLAVLHP----DGYIKIKDRSKDIIISGGENISSIEVEDVLYR 460 (545)
T ss_pred ceeEEEEecCcchhhhcCChhhhHHHhhCCCcccCceEEEcC----CccEEEEecccceEEeCCEEECHHHHHHHHHh
Confidence 369999985 355553 99999999874 46899999999999999999999999999965
No 122
>PRK13390 acyl-CoA synthetase; Provisional
Probab=98.65 E-value=1.6e-06 Score=96.18 Aligned_cols=127 Identities=15% Similarity=0.136 Sum_probs=82.5
Q ss_pred eEEEEecch---hhhHHHHHHHhCCCCCcccccccccccc-ccccCCCCC--CCCCCceeeecCceEEEEeeCCCCCCCC
Q 007532 307 LDVIVTGAM---AQYIPTLDYYSGGKLPMACTMYASSECY-FGLNLNPIC--RPSEVSYTIMPNMAYFEFLPQEPSDSFG 380 (599)
Q Consensus 307 l~~~~~g~~---~~y~~~l~~~~g~~~~~~~~~Y~asEg~-i~i~~~~~~--~~~~~~~~l~~~~~ffEFip~~~~~~~~ 380 (599)
++.+++||. ....+.+++.++ .+++ ..||+||+. +.....+.. .+...+- ..|+ . .+.++.+
T Consensus 272 l~~v~~~g~~~~~~~~~~~~~~~~--~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~G~-~~~g-~-~~i~d~~------ 339 (501)
T PRK13390 272 LRAVIHAAAPCPVDVKHAMIDWLG--PIVY-EYYSSTEAHGMTFIDSPDWLAHPGSVGR-SVLG-D-LHICDDD------ 339 (501)
T ss_pred hheEEEcCCCCCHHHHHHHHHhcC--Ccee-eeecccccCceEEecchhhccCCCCcCC-cccc-e-EEEECCC------
Confidence 667777774 344566677665 6787 899999984 221101110 0011111 1122 1 2333311
Q ss_pred CCCCCCCCcccccCCCCCeEEEEEeec---ccee----------------ccccCCEEEEeeccCCCCEEEEEeecCcee
Q 007532 381 LTSSDPQPVDLVDVEMGKEYELVITTY---AGLY----------------RYRVGDILRVIGFHNSAPQFHFVRRKNVLL 441 (599)
Q Consensus 381 ~~~~~~~~l~~~ev~~G~~YelviTt~---~GLy----------------RYr~GDvV~v~gf~~~~P~i~f~gR~~~~l 441 (599)
...+.+|+.|||+|.+. .|+| -|+|||++++.. .-.+.|+||.++++
T Consensus 340 ----------~~~~~~g~~Gel~v~~~~~~~gy~~~~~~t~~~~~~~~~~w~~tGDl~~~~~----dg~l~~~gR~~~~i 405 (501)
T PRK13390 340 ----------GNELPAGRIGTVYFERDRLPFRYLNDPEKTAAAQHPAHPFWTTVGDLGSVDE----DGYLYLADRKSFMI 405 (501)
T ss_pred ----------CCCCCCCCceEEEEecCCccccccCChhhhHHhhccCCCceEEcCceEEECC----CCeEEEeeccccce
Confidence 12357899999999763 3443 258999999974 46899999999999
Q ss_pred eccccccCHHHHHHHHHH
Q 007532 442 SIESDKTDEAELQNAIDN 459 (599)
Q Consensus 442 ~~~GEk~~e~~v~~av~~ 459 (599)
++.|+++++.+|+++|..
T Consensus 406 ~~~G~~v~p~eIE~~l~~ 423 (501)
T PRK13390 406 ISGGVNIYPQETENALTM 423 (501)
T ss_pred eECCeeeCHHHHHHHHHh
Confidence 999999999999999964
No 123
>PRK07868 acyl-CoA synthetase; Validated
Probab=98.56 E-value=2.4e-06 Score=103.33 Aligned_cols=139 Identities=10% Similarity=0.131 Sum_probs=88.3
Q ss_pred eeEEEEecchh-hhHHHHHHHhCCCCCccccccccccccccccCCCCCCCCCCceeeecCceEEEEeeCCCCCCCCCCCC
Q 007532 306 YLDVIVTGAMA-QYIPTLDYYSGGKLPMACTMYASSECYFGLNLNPICRPSEVSYTIMPNMAYFEFLPQEPSDSFGLTSS 384 (599)
Q Consensus 306 ~l~~~~~g~~~-~y~~~l~~~~g~~~~~~~~~Y~asEg~i~i~~~~~~~~~~~~~~l~~~~~ffEFip~~~~~~~~~~~~ 384 (599)
.++.+++|++. ...+++.+.+++ ++++ +.||.||+.+.+...+...+...|.. +|+..-++..+.+....
T Consensus 721 slr~~~g~gl~~~l~~~~~~~~~~-~~l~-~~YG~TE~~~~~~~~~~~~~~svG~p-~pg~~~v~i~~~d~~~g------ 791 (994)
T PRK07868 721 PVRLFIGSGMPTGLWERVVEAFAP-AHVV-EFFATTDGQAVLANVSGAKIGSKGRP-LPGAGRVELAAYDPEHD------ 791 (994)
T ss_pred ceEEEecCCCCHHHHHHHHHHhCc-hhee-eeeecccccccccccCCCCCcccCCc-cCCCCceeEEEecCcCC------
Confidence 36666666653 556777777876 8888 89999998542211111111123332 33321122221111000
Q ss_pred CCC-Ccc----cccCCCCCeEEEEEeec----------cceec-----cccCCEEEEeeccCCCCEEEEEeecCceeecc
Q 007532 385 DPQ-PVD----LVDVEMGKEYELVITTY----------AGLYR-----YRVGDILRVIGFHNSAPQFHFVRRKNVLLSIE 444 (599)
Q Consensus 385 ~~~-~l~----~~ev~~G~~YelviTt~----------~GLyR-----Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~ 444 (599)
+ .++ ..++++|+.|||++... .|.++ |+|||+++++ ....+.|+||.|+++++.
T Consensus 792 --~li~d~~G~~~~~~~ge~Gel~~~~~~~~~p~~t~~~~~~~~~dgw~~TGDlg~~d----~dG~l~~~GR~dd~Ik~~ 865 (994)
T PRK07868 792 --LILEDDRGFVRRAEVNEVGVLLARARGPIDPTASVKRGVFAPADTWISTEYLFRRD----DDGDYWLVDRRGSVIRTA 865 (994)
T ss_pred --ceeecCCceEEEcCCCCceEEEEecCCCCChhhhhHhcccccCCEEEeccceEEEc----CCCCEEEeccCCCEEEeC
Confidence 1 111 13568999999998642 23333 8899999987 356899999999999999
Q ss_pred ccccCHHHHHHHHHH
Q 007532 445 SDKTDEAELQNAIDN 459 (599)
Q Consensus 445 GEk~~e~~v~~av~~ 459 (599)
|++|++.+||++|.+
T Consensus 866 G~~I~p~EIE~~L~~ 880 (994)
T PRK07868 866 RGPVYTEPVTDALGR 880 (994)
T ss_pred CceEcHHHHHHHHhc
Confidence 999999999999976
No 124
>PRK09029 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=98.52 E-value=1.9e-06 Score=94.59 Aligned_cols=43 Identities=12% Similarity=0.153 Sum_probs=39.0
Q ss_pred ccccCCEEEEeeccCCCCEEEEEeecCceeeccccccCHHHHHHHHHH
Q 007532 412 RYRVGDILRVIGFHNSAPQFHFVRRKNVLLSIESDKTDEAELQNAIDN 459 (599)
Q Consensus 412 RYr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~GEk~~e~~v~~av~~ 459 (599)
.|+|||++++. .-.+.|+||.++++++.|+++++.+|+++|.+
T Consensus 333 ~~~TGD~~~~~-----~g~l~~~gR~~d~i~~~G~~v~p~eiE~~l~~ 375 (458)
T PRK09029 333 WFATRDRGEWQ-----NGELTILGRLDNLFFSGGEGIQPEEIERVINQ 375 (458)
T ss_pred ccCCCCcEEEe-----CCEEEEecccccceeeCCEEeCHHHHHHHHhc
Confidence 38999999987 24799999999999999999999999999975
No 125
>KOG1256 consensus Long-chain acyl-CoA synthetases (AMP-forming) [Lipid transport and metabolism]
Probab=98.50 E-value=1.5e-07 Score=105.88 Aligned_cols=134 Identities=16% Similarity=0.218 Sum_probs=90.5
Q ss_pred ccCCCCceeEEEEecchh---hhHHHHHHHhCCCCCccccccccccccccccCCCC-C-CCCCCceeeecCceEEEEeeC
Q 007532 299 RIWPNTKYLDVIVTGAMA---QYIPTLDYYSGGKLPMACTMYASSECYFGLNLNPI-C-RPSEVSYTIMPNMAYFEFLPQ 373 (599)
Q Consensus 299 ~lWP~l~~l~~~~~g~~~---~y~~~l~~~~g~~~~~~~~~Y~asEg~i~i~~~~~-~-~~~~~~~~l~~~~~ffEFip~ 373 (599)
.||+| ++.+++|++. ....-++-.+| ++++ ++||-||+.-|..+... + -.+..|- .+|.. -.=++++
T Consensus 416 ~LGg~---vr~~~sGaAPls~ev~~F~r~~~g--~~v~-eGYGlTEts~g~~~~~~~d~~lgsvG~-p~p~~-~vKL~dv 487 (691)
T KOG1256|consen 416 SLGGN---VRLIISGAAPLSPEVLTFFRAALG--CRVL-EGYGLTETSAGTTLTLPGDNVLGSVGP-PVPGN-EVKLVDV 487 (691)
T ss_pred HhcCc---eeEEEecCCCCCHHHHHHHHHhcC--ceee-ecccccccCCceEeccCCCCCCCCcCC-cccCc-eEEEech
Confidence 57778 8899999853 22233333344 8899 99999999754432211 1 0111222 22322 1222333
Q ss_pred CCCCCCCCCCCCCCCcccccCCCCCeEEEEEe---eccceec--------------cccCCEEEEeeccCCCCEEEEEee
Q 007532 374 EPSDSFGLTSSDPQPVDLVDVEMGKEYELVIT---TYAGLYR--------------YRVGDILRVIGFHNSAPQFHFVRR 436 (599)
Q Consensus 374 ~~~~~~~~~~~~~~~l~~~ev~~G~~YelviT---t~~GLyR--------------Yr~GDvV~v~gf~~~~P~i~f~gR 436 (599)
.+.+ --..|..|||.|- -+.|+|. .+|||+-++.. ...+.++||
T Consensus 488 pe~n---------------y~a~~~~GEIcirG~~Vf~GYyK~p~~T~e~ideDGWLhTGDiG~~~p----~G~l~IidR 548 (691)
T KOG1256|consen 488 PEMN---------------YDADGSKGEICVRGPNVFMGYYKDPEKTAEAIDEDGWLHTGDIGEWDP----NGTLKIIDR 548 (691)
T ss_pred HHhC---------------cCcCCCcceEEEecchhceeccCChHHHhhhhccccccccccceeECC----CccEEEEec
Confidence 2221 1235668999994 3689998 89999999994 679999999
Q ss_pred cCceeecc-ccccCHHHHHHHHHH
Q 007532 437 KNVLLSIE-SDKTDEAELQNAIDN 459 (599)
Q Consensus 437 ~~~~l~~~-GEk~~e~~v~~av~~ 459 (599)
.|+++++. ||.|.|+.||++..+
T Consensus 549 kK~ifklaqGEyVaPe~IEniy~~ 572 (691)
T KOG1256|consen 549 KKNIFKLAQGEYVAPEKIENIYKR 572 (691)
T ss_pred ccceEEcCCCCccChHHHHHHHhc
Confidence 99999998 899999999999966
No 126
>TIGR02372 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactive yellow protein activation family. Ectothiorhodospira halophila. This enzyme is designated 6.2.1.12 and therefore joins a number of plant enzymes linked to lignin biosynthesis and given similar names.
Probab=98.49 E-value=5.3e-06 Score=89.92 Aligned_cols=43 Identities=14% Similarity=0.255 Sum_probs=39.3
Q ss_pred cccCCEEEEeeccCCCCEEEEEeecCceeeccccccCHHHHHHHHHH
Q 007532 413 YRVGDILRVIGFHNSAPQFHFVRRKNVLLSIESDKTDEAELQNAIDN 459 (599)
Q Consensus 413 Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~GEk~~e~~v~~av~~ 459 (599)
|+|||++++. ....+.|+||.++++++.|+|+++.+|+++|.+
T Consensus 277 ~~tgD~g~~d----~~G~l~i~GR~dd~Ik~~G~~V~p~eIE~~l~~ 319 (386)
T TIGR02372 277 LDLQDRLAWD----KDGGFTILGRKDEILQVGGVNVSPGHVRDILER 319 (386)
T ss_pred eecCceEEEc----CCCcEEEecccCCEEEECCEEEcHHHHHHHHHc
Confidence 6899999886 357899999999999999999999999999976
No 127
>KOG1180 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=98.14 E-value=0.00028 Score=77.42 Aligned_cols=146 Identities=16% Similarity=0.229 Sum_probs=93.1
Q ss_pred eEEEEecch--hhhHHHHHHHhCCCCCccccccccccccccccC-CCCCCC-CCCceeeecCceEEEEeeCCCCCCCCCC
Q 007532 307 LDVIVTGAM--AQYIPTLDYYSGGKLPMACTMYASSECYFGLNL-NPICRP-SEVSYTIMPNMAYFEFLPQEPSDSFGLT 382 (599)
Q Consensus 307 l~~~~~g~~--~~y~~~l~~~~g~~~~~~~~~Y~asEg~i~i~~-~~~~~~-~~~~~~l~~~~~ffEFip~~~~~~~~~~ 382 (599)
|+-+++||+ ++-.+++-..+=+ +|+. .+||-||..-|-.. ++.+.. +.+|- ++ ..+++-.++.++.+=
T Consensus 404 lR~~LsGGapLS~dtQrF~nic~C-~Pv~-qGYGLTEtca~~tv~e~~d~~~g~vG~-pl-~c~eiKLvdw~EgGY---- 475 (678)
T KOG1180|consen 404 LRYILSGGAPLSPDTQRFMNICFC-CPVL-QGYGLTETCAAATVLEPEDFSTGRVGA-PL-PCCEIKLVDWEEGGY---- 475 (678)
T ss_pred eEEEEeCCCCCCHHHHHHHHHhcc-cccc-ccccccchhcccEecChhhcccccccC-Cc-cceEEEEEEhhhcCc----
Confidence 778889986 4555677666544 7998 99999998664322 332211 01111 11 223555555544321
Q ss_pred CCCCCCcccccCCCCCeEEEEEee---ccceec-----------------cccCCEEEEeeccCCCCEEEEEeecCceee
Q 007532 383 SSDPQPVDLVDVEMGKEYELVITT---YAGLYR-----------------YRVGDILRVIGFHNSAPQFHFVRRKNVLLS 442 (599)
Q Consensus 383 ~~~~~~l~~~ev~~G~~YelviTt---~~GLyR-----------------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~ 442 (599)
.+. + .| =+|||+|+- ..|+|. |+||||.+++ ...+++++.|.+|.+.
T Consensus 476 --~~~-----~-~P-PrGEI~i~G~~vt~gY~kn~ekT~e~ft~~~G~~WF~TGDIGe~~----pdG~LkIIDRKKdLVK 542 (678)
T KOG1180|consen 476 --FAK-----N-KP-PRGEILIGGPNVTMGYYKNEEKTKEDFTVEDGQRWFRTGDIGEFH----PDGCLKIIDRKKDLVK 542 (678)
T ss_pred --cCC-----C-CC-CCceEEecCCccChhhhCChhhhhhhceecCCcEEEeccccceec----CCCcEEEeechhhhhh
Confidence 000 0 01 167888863 255554 8999999998 4669999999999998
Q ss_pred cc-ccccCHHHHHHHHHHHHHHhhhcCCeEEeeEEeecCC
Q 007532 443 IE-SDKTDEAELQNAIDNASRLLREFNTSVGEYTSYANTK 481 (599)
Q Consensus 443 ~~-GEk~~e~~v~~av~~a~~~l~~~g~~l~~f~~~~~~~ 481 (599)
+- ||=++=.-||.|+.. +--|.+-|+++|..
T Consensus 543 lq~GEYIsL~KvEa~l~s--------~p~V~NICvyAd~~ 574 (678)
T KOG1180|consen 543 LQNGEYISLGKVEAALRS--------SPYVDNICVYADSN 574 (678)
T ss_pred hcccceeehHHHHHHHhc--------CcchhheEEecccc
Confidence 65 999999999888854 22344678888853
No 128
>PF04443 LuxE: Acyl-protein synthetase, LuxE; InterPro: IPR007534 LuxE is an acyl-protein synthetase found in bioluminescent bacteria. LuxE catalyses the formation of an acyl-protein thiolester from a fatty acid and a protein. This is the second step in the bioluminescent fatty acid reduction system, which converts tetradecanoic acid to the aldehyde substrate of the luciferase-catalysed bioluminescence reaction []. A conserved cysteine found at position 364 in Photobacterium phosphoreum LuxE (Q52100 from SWISSPROT) is thought to be acylated during the transfer of the acyl group from the synthetase subunit to the reductase. The C-terminal of the synthetase is though to act as a flexible arm to transfer acyl groups between the sites of activation and reduction []. A LuxE domain is also found in the Vibrio cholerae RBFN protein (Q06961 from SWISSPROT), which is involved in the biosynthesis of the O-antigen component 3-deoxy-L-glycero-tetronic acid. This entry represents the LuxE domain, which is found in archaeal and bacterial proteins.; GO: 0047474 long-chain fatty acid luciferin component ligase activity, 0008218 bioluminescence
Probab=98.03 E-value=0.00051 Score=73.84 Aligned_cols=81 Identities=19% Similarity=0.315 Sum_probs=54.6
Q ss_pred HHHHHHHHHHHHHHh-cCCChHHHhc----CCCCCCCHHHHhhcCCCCCccchhHHHHHHHcCCCccccc--ccccceee
Q 007532 33 AEAVQEKVLAEILSR-NADVEYLKRY----KLGGATDRETFKSKLPIIKYEDLQPEIQRIANGDRSAILS--AHPISEFL 105 (599)
Q Consensus 33 ~~~~Q~~~L~~iL~~-~~~T~ygr~~----gf~~i~s~edF~~~vPl~~Yed~~p~ier~~~Ge~~~ll~--~~pi~~f~ 105 (599)
-++...+.++++.+. .++++.||++ |++ .+++++ ..+|..--+-++. . .|.+ .+.+....
T Consensus 29 ~~~l~~~~~~~~~~~q~~~~~~Yr~~~~~~~~~--~~v~~~-~dIP~lPi~~FK~--~--------~L~S~~~e~~~~~~ 95 (365)
T PF04443_consen 29 KEELFLALALELFRYQYEHNPPYRKYCDALGFD--EDVKDL-EDIPFLPIRFFKE--H--------ELLSVPEEEVEKVF 95 (365)
T ss_pred HHHHHHHHHHHHHHHHHHhCHHHHHHHHHcCCC--cccccH-HHCCcchHHHHhh--c--------eeeecChhhheeEE
Confidence 344555667777775 5899999987 666 556666 3688777666663 1 2222 34466789
Q ss_pred cccccCCCCccccccChHHHHH
Q 007532 106 TSSGTSAGERKLMPTIQEELDR 127 (599)
Q Consensus 106 ~TSGTT~G~~K~IP~T~~~l~~ 127 (599)
.||||| |.+-.|......+..
T Consensus 96 tSSGTt-G~~S~i~~D~~t~~~ 116 (365)
T PF04443_consen 96 TSSGTT-GQPSRIFRDRETAER 116 (365)
T ss_pred ECCCCC-CCCcEEEECHHHHHH
Confidence 999999 677778877665543
No 129
>KOG1179 consensus Very long-chain acyl-CoA synthetase/fatty acid transporter [Lipid transport and metabolism]
Probab=97.57 E-value=0.0015 Score=72.09 Aligned_cols=232 Identities=16% Similarity=0.207 Sum_probs=137.4
Q ss_pred eEEEEecch-hhhHHHHHHHhCCCCCcccccccccccccc-ccCCCCCCCCCCcee--eecCceEEEEeeCCCCCCCCCC
Q 007532 307 LDVIVTGAM-AQYIPTLDYYSGGKLPMACTMYASSECYFG-LNLNPICRPSEVSYT--IMPNMAYFEFLPQEPSDSFGLT 382 (599)
Q Consensus 307 l~~~~~g~~-~~y~~~l~~~~g~~~~~~~~~Y~asEg~i~-i~~~~~~~~~~~~~~--l~~~~~ffEFip~~~~~~~~~~ 382 (599)
|+....-|. .+..+.+.+.|| ++.+.+.||||||.++ +|++... +..++. +.....=|+.|..|....++..
T Consensus 359 VRla~GNGLR~diW~~Fv~RFg--~~~IgE~YgaTEgn~~~~N~d~~v--GA~G~~~~~~~~l~p~~LIk~D~~t~E~iR 434 (649)
T KOG1179|consen 359 VRLAYGNGLRPDIWQQFVKRFG--IIKIGEFYGATEGNSNLVNYDGRV--GACGFMSRLLKLLYPFRLIKVDPETGEPIR 434 (649)
T ss_pred EEEEecCCCCchHHHHHHHHcC--CCeEEEEeccccCcceeeeecCcc--ccccchhhhhhhccceEEEEecCCCCceee
Confidence 555554454 566788888887 4555599999999775 4544321 111211 1111112677776654322100
Q ss_pred CCCCCCcccccCCCCCeEEEEEe--------eccc-----------eec---------cccCCEEEEeeccCCCCEEEEE
Q 007532 383 SSDPQPVDLVDVEMGKEYELVIT--------TYAG-----------LYR---------YRVGDILRVIGFHNSAPQFHFV 434 (599)
Q Consensus 383 ~~~~~~l~~~ev~~G~~YelviT--------t~~G-----------LyR---------Yr~GDvV~v~gf~~~~P~i~f~ 434 (599)
+++=+ ...+++||.|.||=. .+.| ++| |++||++..+. -..+.|.
T Consensus 435 --d~~G~-Ci~~~~GEpGlLv~~i~~k~P~~~F~GY~g~~~~t~kKl~rDVFkkGD~~f~tGDlLv~D~----~GylYF~ 507 (649)
T KOG1179|consen 435 --DSQGL-CIPCPPGEPGLLVGKIVQKNPLRSFLGYAGPKKATEKKLLRDVFKKGDVYFNTGDLLVADE----LGYLYFK 507 (649)
T ss_pred --cCCce-EEECCCCCCceEEEEeccCCchhhhccccCchhhhhhhhHHhhhccCcEEEeeCcEEEEec----CCcEEEe
Confidence 01111 235689999977643 1233 444 99999998883 6789999
Q ss_pred eecCceeeccccccCHHHHHHHHHHHHHHhhhcCCeEEeeEEee-cCCCCCceEEEEEEEeecCCCCCCChHHHHHHHHH
Q 007532 435 RRKNVLLSIESDKTDEAELQNAIDNASRLLREFNTSVGEYTSYA-NTKTIPGHYVIYWELLIKDSANSPTNEVLNQCCLA 513 (599)
Q Consensus 435 gR~~~~l~~~GEk~~e~~v~~av~~a~~~l~~~g~~l~~f~~~~-~~~~~p~hY~l~~E~e~~~~~~~~~~~~l~~~~~~ 513 (599)
.|.+|..--.||+|+-.||++.+..... + .++.-|-|.. ..++..|-=.+. .+ +..+-+++.+-..
T Consensus 508 DRtGDTFRWKGENVsTtEVe~~l~~~~~-~----~dv~VYGV~VP~~EGRaGMAaI~--~~------p~~~~d~~~l~~~ 574 (649)
T KOG1179|consen 508 DRTGDTFRWKGENVSTTEVEDVLSALDF-L----QDVNVYGVTVPGYEGRAGMAAIV--LD------PTTEKDLEKLYQH 574 (649)
T ss_pred ccCCCceeecCCcccHHHHHHHHhhhcc-c----cceeEEEEecCCccCccceEEEE--ec------CcccchHHHHHHH
Confidence 9999999999999999999998866422 2 1233343322 333333322222 11 1122244455555
Q ss_pred HHHHhChhhHhccccCCccCCeEEEEeCCccHHHHHHHHHhcCCCCCCCCCCccc
Q 007532 514 MEECLNSVYRQGRVADNSIGPLEIRVVRNGTFEELMDYAISRGASINQYKVPRCV 568 (599)
Q Consensus 514 ld~~LN~~Y~~~R~~~g~l~p~~v~iv~~gtF~~~~~~~~~~G~~~~Q~K~Pr~~ 568 (599)
+.+.| +.|+.=|. . +| .=.+=.-|||+-.+..+++.|-..++++-|--+
T Consensus 575 l~~~L-P~YA~P~F-l-Rl---~~~i~~TgTFKl~K~~L~~egf~p~~~~dply~ 623 (649)
T KOG1179|consen 575 LRENL-PSYARPRF-L-RL---QDEIEKTGTFKLQKTELQKEGFNPAIISDPLYY 623 (649)
T ss_pred HHhhC-ccccchHH-H-HH---HhhhhcccchhhHHHHHHHccCCccccCCceEE
Confidence 55555 77776663 2 33 122345699997776677789899999988754
No 130
>COG1020 EntF Non-ribosomal peptide synthetase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.13 E-value=0.011 Score=68.03 Aligned_cols=63 Identities=24% Similarity=0.431 Sum_probs=50.3
Q ss_pred cCCCCCeEEEEEeec---ccee--------------ccccCCEEEEeeccCCCCEEEEEeecCceeeccccccCHHHHHH
Q 007532 393 DVEMGKEYELVITTY---AGLY--------------RYRVGDILRVIGFHNSAPQFHFVRRKNVLLSIESDKTDEAELQN 455 (599)
Q Consensus 393 ev~~G~~YelviTt~---~GLy--------------RYr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~GEk~~e~~v~~ 455 (599)
.+..|..+|+.|+-. .|++ -|+|||++|.. ....++|+||.+..+++.|..+-..+|+.
T Consensus 561 ~~p~gv~gel~i~g~~~a~gy~~~p~lt~~~f~~~~~y~tgD~~r~~----~dg~~e~lgr~D~qvki~g~Riel~eie~ 636 (642)
T COG1020 561 PLPLGVPGELYIAGLGLALGYLNRPDLTAERFIALRLYRTGDLARPL----ADGALEYLGRKDSQVKIRGFRIELGEIEA 636 (642)
T ss_pred cCCCCCCeeeEECCcchhhhhcCChhhhHHHhhhccCccCCCeeeEC----CCCeEEEeccccceeEeceEecCcHHHHH
Confidence 457888899999742 3321 39999999933 46699999999999999999998888888
Q ss_pred HHHH
Q 007532 456 AIDN 459 (599)
Q Consensus 456 av~~ 459 (599)
++.+
T Consensus 637 ~l~~ 640 (642)
T COG1020 637 ALAE 640 (642)
T ss_pred HHhc
Confidence 7743
No 131
>PF14535 AMP-binding_C_2: AMP-binding enzyme C-terminal domain; PDB: 2Y27_A 2Y4N_A 3QOV_B 3S89_D 3LAX_A 2Y4O_B.
Probab=95.79 E-value=0.033 Score=48.20 Aligned_cols=84 Identities=17% Similarity=0.145 Sum_probs=51.3
Q ss_pred ccccCHHHHHHHHHHHHHHhhhcCCeEEeeEEeecCCCCCceEEEEEEEeecCCCCCCChHHHHHHHHHHHHHhChhhHh
Q 007532 445 SDKTDEAELQNAIDNASRLLREFNTSVGEYTSYANTKTIPGHYVIYWELLIKDSANSPTNEVLNQCCLAMEECLNSVYRQ 524 (599)
Q Consensus 445 GEk~~e~~v~~av~~a~~~l~~~g~~l~~f~~~~~~~~~p~hY~l~~E~e~~~~~~~~~~~~l~~~~~~ld~~LN~~Y~~ 524 (599)
|.+++|.+|+++|.+.. ++. .+|.+..+..+.-.+..+.+|+. +. ...+....+.+++.|.++|
T Consensus 1 GvnvfP~~Ie~vl~~~~------~~~-~~y~i~v~~~~~~D~l~v~vE~~--~~-~~~~~~~~~~l~~~i~~~l------ 64 (96)
T PF14535_consen 1 GVNVFPSQIEEVLREFP------EVS-PEYQIVVTREGGLDELTVRVELR--PG-FSDDAEDLEALAERIAERL------ 64 (96)
T ss_dssp TEEE-HHHHHHHHCTST------TEE-EEEEEEEEEETTEEEEEEEEEES--TT-CCTTHHHHHHHHHHHHHHH------
T ss_pred CcEECHHHHHHHHHhCc------CCC-CcEEEEEEcCCCCcEEEEEEEEC--Cc-cCcchHHHHHHHHHHHHHH------
Confidence 78999999999997642 211 27877665433333444666664 21 1223356777888888888
Q ss_pred ccccCCccCCeEEEEeCCccHHH
Q 007532 525 GRVADNSIGPLEIRVVRNGTFEE 547 (599)
Q Consensus 525 ~R~~~g~l~p~~v~iv~~gtF~~ 547 (599)
|+.. .+ .++|.+|++|++.+
T Consensus 65 -k~~l-gv-~~~V~lv~~gtLpr 84 (96)
T PF14535_consen 65 -KERL-GV-RPEVELVPPGTLPR 84 (96)
T ss_dssp -HHHH-SS--EEEEEE-TT-S--
T ss_pred -Hhhc-Cc-eEEEEEECCCCccC
Confidence 6555 47 45999999999997
No 132
>PTZ00297 pantothenate kinase; Provisional
Probab=95.20 E-value=0.35 Score=60.77 Aligned_cols=54 Identities=15% Similarity=0.062 Sum_probs=39.1
Q ss_pred eEEEEEeeccceec--cccCCEEEEeeccCCCCEEEEEeecCceeecc-ccccCHHHHHHHHHH
Q 007532 399 EYELVITTYAGLYR--YRVGDILRVIGFHNSAPQFHFVRRKNVLLSIE-SDKTDEAELQNAIDN 459 (599)
Q Consensus 399 ~YelviTt~~GLyR--Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~-GEk~~e~~v~~av~~ 459 (599)
.|||++. .++ =.|+++ +.|+. ....+.++||.|+++... ||+|.++.||+.+..
T Consensus 825 ~GEIlvr----~~kdpe~T~e~--~~gW~-~dG~L~IidRkKdlikls~GEyVaP~~IE~~l~~ 881 (1452)
T PTZ00297 825 IGQLVLA----KKGEPRRTLPI--AAQWK-RDRTLRLLGPPLGILLPVAYEYVIAAELERIFSQ 881 (1452)
T ss_pred CCeEEEE----ECCChHHHHHh--hCcCc-cCCeEEEEeccccceECCCCcEEcHHHHHHHHhc
Confidence 5888883 111 125553 23543 356899999999999887 899999999999854
No 133
>PRK09188 serine/threonine protein kinase; Provisional
Probab=86.99 E-value=0.82 Score=49.36 Aligned_cols=39 Identities=15% Similarity=0.204 Sum_probs=32.3
Q ss_pred ccccCCEEEEeeccCCCCEEEEEeecCceeeccc---cccCHHHHHHHHHH
Q 007532 412 RYRVGDILRVIGFHNSAPQFHFVRRKNVLLSIES---DKTDEAELQNAIDN 459 (599)
Q Consensus 412 RYr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~G---Ek~~e~~v~~av~~ 459 (599)
-|+|||++++.+ ....+.|+||.+ .| |++++. ||++|.+
T Consensus 210 W~~TGDlg~~~d---~dG~l~~~gR~~-----~G~~i~nV~p~-IE~~L~~ 251 (365)
T PRK09188 210 WLATGKKVYNFI---TRGLFSWSDGEG-----TGDRIDNEAPA-IQAALKS 251 (365)
T ss_pred EEeCCCEEEEEc---CCCeEEEEecCc-----CCcCceeeCHH-HHHHHHh
Confidence 378999999741 356799999997 78 899999 9988866
No 134
>KOG1178 consensus Non-ribosomal peptide synthetase/alpha-aminoadipate reductase and related enzymes [Secondary metabolites biosynthesis, transport and catabolism]
Probab=57.21 E-value=7.6 Score=47.16 Aligned_cols=44 Identities=18% Similarity=0.273 Sum_probs=39.8
Q ss_pred cccCCEEEEeeccCCCCEEEEEeecCceeeccccccCHHHHHHHHHHH
Q 007532 413 YRVGDILRVIGFHNSAPQFHFVRRKNVLLSIESDKTDEAELQNAIDNA 460 (599)
Q Consensus 413 Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~GEk~~e~~v~~av~~a 460 (599)
||+||.+|.. ...-++|.||.++.+.++|-++.=.++..++..-
T Consensus 456 y~tgD~gr~l----~ng~l~~~GR~d~qIK~rG~Ri~L~ei~t~v~~~ 499 (1032)
T KOG1178|consen 456 YRTGDNGRSL----KNGGLEISGRADRQIKDRGVRIELGELNTVVEVH 499 (1032)
T ss_pred ccccccceee----cCCCEEEEEeccceEEEccEEEehhhhchhhccC
Confidence 9999999988 3678999999999999999999999998888764
No 135
>cd04931 ACT_PAH ACT domain of the nonheme iron-dependent aromatic amino acid hydroxylase, phenylalanine hydroxylases (PAH). ACT domain of the nonheme iron-dependent aromatic amino acid hydroxylase, phenylalanine hydroxylases (PAH). PAH catalyzes the hydroxylation of L-Phe to L-Tyr, the first step in the catabolic degradation of L-Phe. In PAH, an autoregulatory sequence, N-terminal of the ACT domain, extends across the catalytic domain active site and regulates the enzyme by intrasteric regulation. It appears that the activation by L-Phe induces a conformational change that converts the enzyme to a high-affinity and high-activity state. Modulation of activity is achieved through inhibition by BH4 and activation by phosphorylation of serine residues of the autoregulatory region. The molecular basis for the cooperative activation process is not fully understood yet. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=43.12 E-value=1.5e+02 Score=25.30 Aligned_cols=58 Identities=10% Similarity=0.118 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHHHHhhhcCCeEEeeEEeecCCCCCceEEEEEEEeecCCCCCCChHHHHHHHHHHHHHh
Q 007532 450 EAELQNAIDNASRLLREFNTSVGEYTSYANTKTIPGHYVIYWELLIKDSANSPTNEVLNQCCLAMEECL 518 (599)
Q Consensus 450 e~~v~~av~~a~~~l~~~g~~l~~f~~~~~~~~~p~hY~l~~E~e~~~~~~~~~~~~l~~~~~~ld~~L 518 (599)
+..+-.++..+. ..|+-+...-.++. ...++.|.+|++++. . .+ ..+....+.|.+.+
T Consensus 25 pGsL~~vL~~Fa----~~~INLt~IeSRP~-~~~~~~Y~FfVDieg--~---~~-~~~~~~l~~L~~~~ 82 (90)
T cd04931 25 VGALAKVLRLFE----EKDINLTHIESRPS-RLNKDEYEFFINLDK--K---SA-PALDPIIKSLRNDI 82 (90)
T ss_pred CcHHHHHHHHHH----HCCCCEEEEEeccC-CCCCceEEEEEEEEc--C---CC-HHHHHHHHHHHHHh
Confidence 444666665553 47888877766653 235678999999973 1 12 23444445555544
No 136
>KOG1179 consensus Very long-chain acyl-CoA synthetase/fatty acid transporter [Lipid transport and metabolism]
Probab=34.91 E-value=20 Score=40.62 Aligned_cols=30 Identities=27% Similarity=0.457 Sum_probs=22.2
Q ss_pred CCCCe----EEEEEeeccc--eeccccCCEEEEeec
Q 007532 395 EMGKE----YELVITTYAG--LYRYRVGDILRVIGF 424 (599)
Q Consensus 395 ~~G~~----YelviTt~~G--LyRYr~GDvV~v~gf 424 (599)
+.|.. |-|++-.--| +++=||||+-|..|-
T Consensus 484 kkGD~~f~tGDlLv~D~~GylYF~DRtGDTFRWKGE 519 (649)
T KOG1179|consen 484 KKGDVYFNTGDLLVADELGYLYFKDRTGDTFRWKGE 519 (649)
T ss_pred ccCcEEEeeCcEEEEecCCcEEEeccCCCceeecCC
Confidence 57764 4566666677 566799999998874
No 137
>PF01797 Y1_Tnp: Transposase IS200 like; InterPro: IPR002686 Transposases are needed for efficient transposition of the insertion sequence or transposon DNA. This entry represents a domain found in transposases for IS200 from Escherichia coli []. More information about these proteins can be found at Protein of the Month: Transposase [].; GO: 0003677 DNA binding, 0004803 transposase activity, 0006313 transposition, DNA-mediated; PDB: 2F5G_B 2F4F_B 2EC2_F 2XM3_C 2XQC_D 2XO6_A 2XMA_E 2VJV_B 2VIH_B 2VJU_A ....
Probab=34.66 E-value=2e+02 Score=24.95 Aligned_cols=103 Identities=13% Similarity=0.216 Sum_probs=57.1
Q ss_pred EEEeecCceeeccccccCHHHHHHHHHHHHHHhhhcCCeEEeeEEeecCCCCCceEEEEEEEeecCCCCCCChHHHHHHH
Q 007532 432 HFVRRKNVLLSIESDKTDEAELQNAIDNASRLLREFNTSVGEYTSYANTKTIPGHYVIYWELLIKDSANSPTNEVLNQCC 511 (599)
Q Consensus 432 ~f~gR~~~~l~~~GEk~~e~~v~~av~~a~~~l~~~g~~l~~f~~~~~~~~~p~hY~l~~E~e~~~~~~~~~~~~l~~~~ 511 (599)
.++-|.++--.+..+. ..+.+.+.+...+. ..++++..|++.+| |+.+.+++. +. . .+..+.
T Consensus 7 hiv~~~~~r~~~~~~~-~~~~l~~~l~~~~~---~~~~~i~~~~vm~n------HvHllv~~~--~~---~---~is~~~ 68 (121)
T PF01797_consen 7 HIVFRTKYRRPLFNDE-IREALLEILREICE---EYGIEIIAFVVMPN------HVHLLVSIP--PK---Q---SISKFM 68 (121)
T ss_dssp EEEEEBGGGTSSSSHH-HHHHHHHHHHHHHH---HTTEEEEEEEEETT------EEEEEEEE---TT---S----HHHHH
T ss_pred EEEEeeeCCEeeeehh-eeeeeeeccccccc---cccceeeeecccCc------ccceeeeec--cc---c---cchhee
Confidence 4555555555556555 56667777777654 57899999987544 999998874 21 1 334444
Q ss_pred HHHHH----HhChhhHhcccc---CCcc--CCeEEEEeCCccHHHHHHHH
Q 007532 512 LAMEE----CLNSVYRQGRVA---DNSI--GPLEIRVVRNGTFEELMDYA 552 (599)
Q Consensus 512 ~~ld~----~LN~~Y~~~R~~---~g~l--~p~~v~iv~~gtF~~~~~~~ 552 (599)
+.+-. .+|..|.....+ .|.+ +.--...+....++...++.
T Consensus 69 ~~lK~~~s~~~~k~~~~~~~~~~~~~~~Wq~~y~~~~i~~~~~~~~~~YI 118 (121)
T PF01797_consen 69 QRLKGRSSRWINKEFPELKKRYFWRGHFWQRGYFDRSIRNESLDNVIRYI 118 (121)
T ss_dssp HHHHHHHHHHHHHHTHHHHHSCCT-TSSBESEEEEEEEBSSBHHHHHHHH
T ss_pred ecccccccccccccccceecccccccccccCCeEEEEECChhHHHHHHHH
Confidence 44444 235333332211 1122 23456666666776665543
No 138
>PF09926 DUF2158: Uncharacterized small protein (DUF2158); InterPro: IPR019226 This entry represents a family of predominantly prokaryotic proteins with no known function.
Probab=34.35 E-value=38 Score=26.10 Aligned_cols=19 Identities=16% Similarity=0.704 Sum_probs=15.3
Q ss_pred cccCCEEEEeeccCCCCEEEEE
Q 007532 413 YRVGDILRVIGFHNSAPQFHFV 434 (599)
Q Consensus 413 Yr~GDvV~v~gf~~~~P~i~f~ 434 (599)
|.+||+|+..+ +.|.+.+.
T Consensus 1 f~~GDvV~LKS---GGp~MTV~ 19 (53)
T PF09926_consen 1 FKIGDVVQLKS---GGPRMTVT 19 (53)
T ss_pred CCCCCEEEEcc---CCCCeEEE
Confidence 68999999995 77877665
No 139
>COG5475 Uncharacterized small protein [Function unknown]
Probab=32.60 E-value=50 Score=25.66 Aligned_cols=24 Identities=13% Similarity=0.379 Sum_probs=20.5
Q ss_pred cccCCEEEEeeccCCCCEEEEEeecCc
Q 007532 413 YRVGDILRVIGFHNSAPQFHFVRRKNV 439 (599)
Q Consensus 413 Yr~GDvV~v~gf~~~~P~i~f~gR~~~ 439 (599)
|.+||+|++. .+.|++.+.+-.+|
T Consensus 5 FstgdvV~lK---sGGP~Mtvs~~ss~ 28 (60)
T COG5475 5 FSTGDVVTLK---SGGPRMTVSGYSSD 28 (60)
T ss_pred eecCcEEEee---cCCceEEEeccccC
Confidence 6799999999 48999999887764
No 140
>PF11454 DUF3016: Protein of unknown function (DUF3016); InterPro: IPR021557 This is a bacterial family of uncharacterised proteins.
Probab=32.54 E-value=1.1e+02 Score=28.63 Aligned_cols=55 Identities=18% Similarity=0.297 Sum_probs=36.0
Q ss_pred CCCCCeEEEEEee--ccceecc----ccCCEEEEeeccCCCCEEEEEeecC----ceeeccccccCH
Q 007532 394 VEMGKEYELVITT--YAGLYRY----RVGDILRVIGFHNSAPQFHFVRRKN----VLLSIESDKTDE 450 (599)
Q Consensus 394 v~~G~~YelviTt--~~GLyRY----r~GDvV~v~gf~~~~P~i~f~gR~~----~~l~~~GEk~~e 450 (599)
|.+|+.-+|.||. ++|-+++ .++|+ ||+- .--.|+|+|.+... .++.-.-|||+.
T Consensus 47 Lp~gq~L~v~VtDvDLAG~~~P~~~~~~~dv-Rvvk-di~pPRI~l~Y~L~d~~G~vi~~g~e~L~D 111 (141)
T PF11454_consen 47 LPPGQTLEVTVTDVDLAGDVEPFWGSGANDV-RVVK-DIYPPRIELSYTLTDADGKVIKQGEEKLKD 111 (141)
T ss_pred CCCCCEEEEEEEecccCcccccCcCCCCCcE-EEEc-cCCCCcEEEEEEEECCCCcEEEecceEEec
Confidence 7899999999997 5997765 44554 5553 13468998887643 344333355443
No 141
>PF07311 Dodecin: Dodecin; InterPro: IPR009923 This entry represents proteins with a Dodecin-like topology. Dodecin flavoprotein is a small dodecameric flavin-binding protein from Halobacterium salinarium (Halobacterium halobium) that contains two flavins stacked in a single binding pocket between two tryptophan residues to form an aromatic tetrade []. Dodecin binds riboflavin, although it appears to have a broad specificity for flavins. Lumichrome, a molecule associated with flavin metabolism, appears to be a ligand of dodecin, which could act as a waste-trapping device. ; PDB: 2VYX_L 2DEG_F 2V18_K 2V19_D 2UX9_B 2CZ8_E 2V21_F 2CC8_A 2CCB_A 2VX9_A ....
Probab=31.49 E-value=1.4e+02 Score=24.19 Aligned_cols=48 Identities=25% Similarity=0.205 Sum_probs=34.7
Q ss_pred ccCHHHHHHHHHHHHHHhhh-cCCeEEeeEEeecCCCCCceEEEEEEEee
Q 007532 447 KTDEAELQNAIDNASRLLRE-FNTSVGEYTSYANTKTIPGHYVIYWELLI 495 (599)
Q Consensus 447 k~~e~~v~~av~~a~~~l~~-~g~~l~~f~~~~~~~~~p~hY~l~~E~e~ 495 (599)
+=.|+.+++||.+|++.++. .++++.++.+..+. +.-.||.+-+++.|
T Consensus 14 ~S~edAv~~Av~~A~kTl~ni~~~eV~e~~~~v~d-g~i~~y~v~lkv~F 62 (66)
T PF07311_consen 14 KSWEDAVQNAVARASKTLRNIRWFEVKEQRGHVED-GKITEYQVNLKVSF 62 (66)
T ss_dssp SHHHHHHHHHHHHHHHHSSSEEEEEEEEEEEEEET-TCEEEEEEEEEEEE
T ss_pred CCHHHHHHHHHHHHhhchhCcEEEEEEEEEEEEeC-CcEEEEEEEEEEEE
Confidence 44588899999999887632 24677788776654 35569998888766
No 142
>COG2139 RPL21A Ribosomal protein L21E [Translation, ribosomal structure and biogenesis]
Probab=30.83 E-value=40 Score=29.16 Aligned_cols=37 Identities=22% Similarity=0.500 Sum_probs=20.3
Q ss_pred eeccccCCEEEEe---eccCCCCEEEEEeecCceeecccc
Q 007532 410 LYRYRVGDILRVI---GFHNSAPQFHFVRRKNVLLSIESD 446 (599)
Q Consensus 410 LyRYr~GDvV~v~---gf~~~~P~i~f~gR~~~~l~~~GE 446 (599)
|.-|..||.|-++ .++...|-=+|.||++.++...|.
T Consensus 30 l~ey~~Gd~V~I~IdpSv~kGmPh~rf~G~TG~Vvg~~g~ 69 (98)
T COG2139 30 LQEYKVGDKVHIDIDPSVHKGMPHPRFQGKTGTVVGVRGR 69 (98)
T ss_pred HhhccCCCEEEEEeCcccccCCCCccccCcceEEEeccCC
Confidence 3446666666654 333445555666666666555553
No 143
>PTZ00189 60S ribosomal protein L21; Provisional
Probab=30.25 E-value=37 Score=32.23 Aligned_cols=35 Identities=17% Similarity=0.440 Sum_probs=22.5
Q ss_pred ccccCCEEEEee---ccCCCCEEEEEeecCceeecccc
Q 007532 412 RYRVGDILRVIG---FHNSAPQFHFVRRKNVLLSIESD 446 (599)
Q Consensus 412 RYr~GDvV~v~g---f~~~~P~i~f~gR~~~~l~~~GE 446 (599)
-|+.||+|-+.+ .+.+.|-=.|-||++-+.|+.|.
T Consensus 33 ~yk~GD~VdIk~d~svqkGMPhk~YHGkTG~V~nv~~~ 70 (160)
T PTZ00189 33 TFKVGDYVDIVVDSAVHKGMPYKYYHGRTGRVFNVTPR 70 (160)
T ss_pred HccCCCEEEEEecCCeecCCCcccccCCCeEEEeecCe
Confidence 377777777765 33445666677777776666653
No 144
>PRK11899 prephenate dehydratase; Provisional
Probab=26.78 E-value=4.4e+02 Score=27.38 Aligned_cols=41 Identities=15% Similarity=0.056 Sum_probs=28.1
Q ss_pred HHHHHHHHHHHHHHhhhcCCeEEeeEEeecCCCCCceEEEEEEEee
Q 007532 450 EAELQNAIDNASRLLREFNTSVGEYTSYANTKTIPGHYVIYWELLI 495 (599)
Q Consensus 450 e~~v~~av~~a~~~l~~~g~~l~~f~~~~~~~~~p~hY~l~~E~e~ 495 (599)
+-.+-++|..+. ..|+-|.-.-+++. ...++.|.||+|++.
T Consensus 205 pGaL~~vL~~Fa----~~gINLtkIeSRP~-~~~~~~Y~F~id~eg 245 (279)
T PRK11899 205 PAALYKALGGFA----TNGVNMTKLESYMV-GGSFTATQFYADIEG 245 (279)
T ss_pred CChHHHHHHHHH----HcCCCeeeEEeeec-CCCCceEEEEEEEEC
Confidence 445666666554 46777776666653 347889999999983
No 145
>PRK13390 acyl-CoA synthetase; Provisional
Probab=26.55 E-value=30 Score=38.15 Aligned_cols=19 Identities=37% Similarity=0.302 Sum_probs=15.8
Q ss_pred ceeecccccCCCCccccccC
Q 007532 102 SEFLTSSGTSAGERKLMPTI 121 (599)
Q Consensus 102 ~~f~~TSGTT~G~~K~IP~T 121 (599)
.+...||||| |.||-+..+
T Consensus 151 a~i~~TSGTT-G~PKgV~~~ 169 (501)
T PRK13390 151 AVMLYSSGTT-GFPKGIQPD 169 (501)
T ss_pred EEEEeCCCCC-CCCCEEEee
Confidence 4677899999 899999743
No 146
>PLN00190 60S ribosomal protein L21; Provisional
Probab=25.35 E-value=50 Score=31.27 Aligned_cols=37 Identities=19% Similarity=0.461 Sum_probs=25.6
Q ss_pred eeccccCCEEEEee---ccCCCCEEEEEeecCceeecccc
Q 007532 410 LYRYRVGDILRVIG---FHNSAPQFHFVRRKNVLLSIESD 446 (599)
Q Consensus 410 LyRYr~GDvV~v~g---f~~~~P~i~f~gR~~~~l~~~GE 446 (599)
|.-|+.||+|-+.+ ++.+.|-=.|-||++-+.|+.|.
T Consensus 31 l~~yk~GD~VdIk~~~svqKGMPhk~YHGkTG~V~nv~~~ 70 (158)
T PLN00190 31 LRTFKVGDYVDIKVNGAIHKGMPHKFYHGRTGIVWNVTKR 70 (158)
T ss_pred HHHhcCCCEEEEEecCCeecCCCcccccCCCeEEEeecCc
Confidence 33488888888775 33456766788888877777664
No 147
>COG0077 PheA Prephenate dehydratase [Amino acid transport and metabolism]
Probab=23.95 E-value=4.9e+02 Score=27.14 Aligned_cols=70 Identities=17% Similarity=0.140 Sum_probs=40.2
Q ss_pred EeeccCCCCEEEEEeec------C---ceeeccccccCHHHHHHHHHHHHHHhhhcCCeEEeeEEeecCCCCCceEEEEE
Q 007532 421 VIGFHNSAPQFHFVRRK------N---VLLSIESDKTDEAELQNAIDNASRLLREFNTSVGEYTSYANTKTIPGHYVIYW 491 (599)
Q Consensus 421 v~gf~~~~P~i~f~gR~------~---~~l~~~GEk~~e~~v~~av~~a~~~l~~~g~~l~~f~~~~~~~~~p~hY~l~~ 491 (599)
|.+..++.-||.+++|. + ...-++...=-+-.+.++|..+ +..|+-+.-.-+++- ...++.|.||+
T Consensus 167 I~D~~~N~TRF~vl~r~~~~~~~~~~~kTsl~f~~~n~PGaL~~~L~~F----a~~gINlTkIESRP~-k~~~~~Y~F~i 241 (279)
T COG0077 167 IEDEPNNRTRFLVLSRRKPPSVSDGPEKTSLIFSVPNKPGALYKALGVF----AKRGINLTKIESRPL-KTGLGEYLFFI 241 (279)
T ss_pred ccCCCCCeEEEEEEeccCCCCcCCCCceEEEEEEcCCCCchHHHHHHHH----HHcCcceeeEeeccc-CCCCeeEEEEE
Confidence 44445666677777763 1 1222222222344555555554 457776655544443 34789999999
Q ss_pred EEee
Q 007532 492 ELLI 495 (599)
Q Consensus 492 E~e~ 495 (599)
+++.
T Consensus 242 D~eg 245 (279)
T COG0077 242 DIEG 245 (279)
T ss_pred EEec
Confidence 9984
No 148
>cd04880 ACT_AAAH-PDT-like ACT domain of the nonheme iron-dependent, aromatic amino acid hydroxylases (AAAH). ACT domain of the nonheme iron-dependent, aromatic amino acid hydroxylases (AAAH): Phenylalanine hydroxylases (PAH), tyrosine hydroxylases (TH) and tryptophan hydroxylases (TPH), both peripheral (TPH1) and neuronal (TPH2) enzymes. This family of enzymes shares a common catalytic mechanism, in which dioxygen is used by an active site containing a single, reduced iron atom to hydroxylate an unactivated aromatic substrate, concomitant with a two-electron oxidation of tetrahydropterin (BH4) cofactor to its quinonoid dihydropterin form. Eukaryotic AAAHs have an N-terminal ACT (regulatory) domain, a middle catalytic domain and a C-terminal domain which is responsible for the oligomeric state of the enzyme forming a domain-swapped tetrameric coiled-coil. The PAH, TH, and TPH enzymes contain highly conserved catalytic domains but distinct N-terminal ACT domains and differ in their mech
Probab=23.56 E-value=3.7e+02 Score=21.23 Aligned_cols=29 Identities=10% Similarity=0.048 Sum_probs=20.7
Q ss_pred hhcCCeEEeeEEeecCCCCCceEEEEEEEe
Q 007532 465 REFNTSVGEYTSYANTKTIPGHYVIYWELL 494 (599)
Q Consensus 465 ~~~g~~l~~f~~~~~~~~~p~hY~l~~E~e 494 (599)
+..|+.+......+.. ..++.|.+|++++
T Consensus 21 ~~~~vni~~I~Srp~~-~~~~~~~f~id~~ 49 (75)
T cd04880 21 AERGINLTKIESRPSR-KGLWEYEFFVDFE 49 (75)
T ss_pred HHCCCCEEEEEeeecC-CCCceEEEEEEEE
Confidence 4578888766555433 3578899999997
No 149
>PRK04306 50S ribosomal protein L21e; Reviewed
Probab=23.36 E-value=63 Score=28.20 Aligned_cols=37 Identities=14% Similarity=0.269 Sum_probs=24.9
Q ss_pred eeccccCCEEEEeecc---CCCCEEEEEeecCceeecccc
Q 007532 410 LYRYRVGDILRVIGFH---NSAPQFHFVRRKNVLLSIESD 446 (599)
Q Consensus 410 LyRYr~GDvV~v~gf~---~~~P~i~f~gR~~~~l~~~GE 446 (599)
|--|+.||.|-+..-. .+.|-=.|-||++-+.|+.|.
T Consensus 32 l~~y~~Gd~V~I~~d~sv~kGmPh~~yhGkTG~V~~v~~~ 71 (98)
T PRK04306 32 LQEFEEGDKVHIVIDPSVHKGMPHPRFHGKTGTVVGKRGR 71 (98)
T ss_pred HHhccCCCEEEEEecCceecCCccccccCCCEEEEeecCe
Confidence 3348888888877522 345666788888877777664
No 150
>cd03483 MutL_Trans_MLH1 MutL_Trans_MLH1: transducer domain, having a ribosomal S5 domain 2-like fold, found in proteins similar to yeast and human MLH1 (MutL homologue 1). This transducer domain is homologous to the second domain of the DNA gyrase B subunit, which is known to be important in nucleotide hydrolysis and the transduction of structural signals from ATP-binding site to the DNA breakage/reunion regions of the enzymes. MLH1 forms heterodimers with PMS2, PMS1 and MLH3. These three complexes have distinct functions in meiosis. hMLH1-hPMS2 also participates in the repair of all DNA mismatch repair (MMR) substrates. Roles for hMLH1-hPMS1 or hMLH1-hMLH3 in MMR have not been established. Cells lacking hMLH1 have a strong mutator phenotype and display microsatellite instability (MSI). Mutation in hMLH1 causes predisposition to HNPCC, Muir-Torre syndrome and Turcot syndrome (HNPCC variant). Mutation in hMLH1 accounts for a large fraction of HNPCC families.
Probab=23.28 E-value=1.7e+02 Score=26.37 Aligned_cols=44 Identities=20% Similarity=0.267 Sum_probs=36.2
Q ss_pred CEEEEeeccCCCCEEEEEeecCceeeccccccCHHHHHHHHHHHHH
Q 007532 417 DILRVIGFHNSAPQFHFVRRKNVLLSIESDKTDEAELQNAIDNASR 462 (599)
Q Consensus 417 DvV~v~gf~~~~P~i~f~gR~~~~l~~~GEk~~e~~v~~av~~a~~ 462 (599)
+-+++.||- ..|.+. .+|..+++=++|.-+....+..||.++-.
T Consensus 30 ~~~~i~G~i-s~p~~~-~~~~~q~~fVNgR~V~~~~l~~aI~~~Y~ 73 (127)
T cd03483 30 LGFKVKGLI-SNANYS-KKKIIFILFINNRLVECSALRRAIENVYA 73 (127)
T ss_pred CcEEEEEEE-cCchhc-CCCceEEEEEcCCEecCHHHHHHHHHHHH
Confidence 558888885 456666 67788899999999999999999999865
No 151
>PRK11898 prephenate dehydratase; Provisional
Probab=21.43 E-value=5.7e+02 Score=26.52 Aligned_cols=41 Identities=17% Similarity=0.147 Sum_probs=27.9
Q ss_pred HHHHHHHHHHHHHHhhhcCCeEEeeEEeecCCCCCceEEEEEEEee
Q 007532 450 EAELQNAIDNASRLLREFNTSVGEYTSYANTKTIPGHYVIYWELLI 495 (599)
Q Consensus 450 e~~v~~av~~a~~~l~~~g~~l~~f~~~~~~~~~p~hY~l~~E~e~ 495 (599)
+..+-++|..+. ..|+-|...-+++. ...++.|.+|+|++.
T Consensus 208 pGsL~~~L~~F~----~~~INLt~IeSRP~-~~~~~~y~F~vd~eg 248 (283)
T PRK11898 208 PGALYKALSEFA----WRGINLTRIESRPT-KTGLGTYFFFIDVEG 248 (283)
T ss_pred ccHHHHHHHHHH----HCCCCeeeEecccC-CCCCccEEEEEEEEc
Confidence 445666665554 47888877666653 336789999999983
No 152
>COG2026 RelE Cytotoxic translational repressor of toxin-antitoxin stability system [Translation, ribosomal structure and biogenesis / Cell division and chromosome partitioning]
Probab=21.14 E-value=1.1e+02 Score=25.95 Aligned_cols=29 Identities=21% Similarity=0.370 Sum_probs=18.8
Q ss_pred EEEeeccceeccccCCEEEEeeccCCCCE
Q 007532 402 LVITTYAGLYRYRVGDILRVIGFHNSAPQ 430 (599)
Q Consensus 402 lviTt~~GLyRYr~GDvV~v~gf~~~~P~ 430 (599)
.......|+||+|+||-.-+-.+......
T Consensus 45 ~~~~~~~~~~R~RiG~YRlIy~i~d~~~~ 73 (90)
T COG2026 45 KLRKGLSGKYRLRIGDYRLIYEIDDETLT 73 (90)
T ss_pred ecccCCCCeEEEEecCEEEEEEEECCceE
Confidence 33344678999999996555555444443
No 153
>cd04866 LigD_Pol_like_3 LigD_Pol_like_3: Polymerase (Pol) domain of bacterial LigD proteins similar to Pseudomonas aeruginosa (Pae) LigD, subgroup 3. The LigD Pol domain belongs to the archaeal/eukaryal primase (AEP) superfamily. In prokaryotes, LigD along with Ku is required for non-homologous end joining (NHEJ)-mediated repair of DNA double-strand breaks (DSB). NHEJ-mediated DNA DSB repair is error-prone. It has been suggested that LigD Pol contributes to NHEJ-mediated repair DSB repair in vivo, by filling in short 5'-overhangs with ribonucleotides; the filled in termini would then be sealed by the associated LigD ligase domain, resulting in short stretches of RNA incorporated into the genomic DNA. The Pol domains of PaeLigD and Mycobacterium tuberculosis (Mt)LigD are stimulated by manganese, are error-prone, and prefer adding rNTPs to dNTPs in vitro; however PaeLigD and MtLigD belong to other subgroups, proteins in this subgroup await functional characterization.
Probab=21.04 E-value=67 Score=32.28 Aligned_cols=50 Identities=22% Similarity=0.408 Sum_probs=31.8
Q ss_pred cccccccceeecccccCCCCccccccC-hH-HHHHHHHHHHHHHHHHhhcCCC
Q 007532 95 ILSAHPISEFLTSSGTSAGERKLMPTI-QE-ELDRRQLLYSLLMPVMNLYVPG 145 (599)
Q Consensus 95 ll~~~pi~~f~~TSGTT~G~~K~IP~T-~~-~l~~~~~~~~~~~~~~~~~~p~ 145 (599)
+|..-.+..|.+|||.+ |-.-++|.. .. ..+........++..+.+..|.
T Consensus 121 ~L~~lgL~~f~KTSG~k-GlHV~vPl~~~~~~~~~~r~fa~~iA~~l~~~~P~ 172 (223)
T cd04866 121 ILDALGLTSFVKTSGNK-GLQVYIPLPDNKFTYDETRLFTEFIAEYLCQQFPE 172 (223)
T ss_pred HHHHcCCccceEccCCC-eEEEEEEcCCCCCCHHHHHHHHHHHHHHHHHHCch
Confidence 34444577899999999 899999999 43 2333333333344445555675
Done!