Query 007533
Match_columns 599
No_of_seqs 461 out of 2815
Neff 5.6
Searched_HMMs 29240
Date Mon Mar 25 04:08:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007533.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007533hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3nva_A CTP synthase; rossman f 100.0 1E-198 4E-203 1609.5 41.0 527 1-546 3-534 (535)
2 1vco_A CTP synthetase; tetrame 100.0 2E-162 7E-167 1341.2 40.3 527 1-547 12-546 (550)
3 1s1m_A CTP synthase; CTP synth 100.0 3E-160 1E-164 1322.3 41.1 525 1-548 3-540 (545)
4 2c5m_A CTP synthase; cytidine 100.0 2E-144 5E-149 1077.6 20.5 270 1-270 23-294 (294)
5 2vo1_A CTP synthase 1; pyrimid 100.0 3E-142 1E-146 1069.6 19.4 271 1-271 23-295 (295)
6 2v4u_A CTP synthase 2; pyrimid 100.0 5.2E-49 1.8E-53 405.9 22.2 276 281-557 11-287 (289)
7 2w7t_A CTP synthetase, putativ 100.0 6.8E-46 2.3E-50 379.7 19.7 252 295-555 8-265 (273)
8 1a9x_B Carbamoyl phosphate syn 100.0 2E-35 6.9E-40 314.9 10.7 291 178-546 51-375 (379)
9 3fij_A LIN1909 protein; 11172J 100.0 2.5E-27 8.5E-32 239.4 19.3 210 295-548 4-244 (254)
10 2a9v_A GMP synthase; structura 99.9 1.2E-24 4.1E-29 214.2 18.0 189 294-547 12-202 (212)
11 1qdl_B Protein (anthranilate s 99.9 3.4E-24 1.2E-28 207.7 18.2 181 298-542 4-193 (195)
12 1wl8_A GMP synthase [glutamine 99.9 9E-24 3.1E-28 203.2 16.9 183 297-545 2-187 (189)
13 4gud_A Imidazole glycerol phos 99.9 1.5E-24 5.1E-29 211.6 11.2 199 297-547 4-207 (211)
14 2vpi_A GMP synthase; guanine m 99.9 4.8E-24 1.7E-28 211.1 9.1 185 296-544 25-210 (218)
15 1l9x_A Gamma-glutamyl hydrolas 99.9 1.8E-23 6E-28 217.9 12.8 205 295-548 30-280 (315)
16 3uow_A GMP synthetase; structu 99.9 4.6E-23 1.6E-27 229.8 16.6 212 296-551 8-236 (556)
17 2ywj_A Glutamine amidotransfer 99.9 4.8E-23 1.7E-27 197.4 13.0 183 296-546 1-185 (186)
18 3tqi_A GMP synthase [glutamine 99.9 4.3E-23 1.5E-27 228.7 12.0 195 295-551 10-211 (527)
19 3r75_A Anthranilate/para-amino 99.9 1.1E-22 3.7E-27 230.1 13.6 181 295-547 446-636 (645)
20 1i1q_B Anthranilate synthase c 99.9 1.3E-21 4.5E-26 188.9 19.0 189 296-546 1-191 (192)
21 1o1y_A Conserved hypothetical 99.9 1.2E-21 4E-26 196.4 17.2 189 289-546 6-202 (239)
22 1gpm_A GMP synthetase, XMP ami 99.9 1.6E-22 5.5E-27 224.0 10.8 191 296-548 8-205 (525)
23 3d54_D Phosphoribosylformylgly 99.9 5.2E-21 1.8E-25 186.1 16.6 186 296-544 3-211 (213)
24 1gpw_B Amidotransferase HISH; 99.9 8E-22 2.7E-26 191.2 9.5 184 296-546 1-199 (201)
25 2ywb_A GMP synthase [glutamine 99.9 7.2E-22 2.5E-26 217.7 10.4 180 298-544 2-184 (503)
26 3l7n_A Putative uncharacterize 99.8 1E-19 3.6E-24 181.5 17.5 184 296-547 1-197 (236)
27 2ywd_A Glutamine amidotransfer 99.8 2.9E-20 9.8E-25 178.2 12.9 181 296-545 3-190 (191)
28 3m3p_A Glutamine amido transfe 99.8 8.2E-20 2.8E-24 184.7 16.9 185 296-546 4-193 (250)
29 1q7r_A Predicted amidotransfer 99.8 5.6E-20 1.9E-24 181.3 12.4 185 294-546 22-211 (219)
30 2nv0_A Glutamine amidotransfer 99.8 5.7E-20 1.9E-24 177.4 12.0 184 296-547 2-190 (196)
31 2vxo_A GMP synthase [glutamine 99.8 4.4E-20 1.5E-24 210.4 10.7 183 296-543 30-213 (697)
32 1ka9_H Imidazole glycerol phos 99.8 1.1E-19 3.8E-24 176.3 9.9 184 296-544 3-200 (200)
33 2iss_D Glutamine amidotransfer 99.8 1.2E-19 4.2E-24 177.4 9.0 186 292-544 17-207 (208)
34 2abw_A PDX2 protein, glutamina 99.7 5.3E-18 1.8E-22 167.6 11.5 198 295-548 3-217 (227)
35 1jvn_A Glutamine, bifunctional 99.7 1.5E-17 5.1E-22 185.5 3.9 197 296-544 5-215 (555)
36 2vdj_A Homoserine O-succinyltr 99.5 7.8E-13 2.7E-17 137.1 17.1 195 294-529 34-241 (301)
37 2h2w_A Homoserine O-succinyltr 99.5 7.5E-13 2.6E-17 137.7 16.1 207 294-546 46-264 (312)
38 3ugj_A Phosphoribosylformylgly 98.9 5.3E-09 1.8E-13 126.0 14.3 194 295-530 1047-1275(1303)
39 3l4e_A Uncharacterized peptida 98.4 2.2E-07 7.4E-12 91.2 5.7 92 295-403 27-127 (206)
40 1fy2_A Aspartyl dipeptidase; s 98.3 1.8E-07 6.1E-12 93.0 3.5 88 295-403 31-127 (229)
41 1oi4_A Hypothetical protein YH 97.6 0.00016 5.4E-09 69.3 9.2 103 294-404 22-133 (193)
42 3l18_A Intracellular protease 97.2 0.00079 2.7E-08 62.4 8.2 100 295-404 2-110 (168)
43 4dzz_A Plasmid partitioning pr 96.9 0.0051 1.8E-07 57.7 10.9 97 1-165 1-97 (206)
44 3qxc_A Dethiobiotin synthetase 96.4 0.012 4E-07 58.9 10.1 171 1-219 21-199 (242)
45 2vrn_A Protease I, DR1199; cys 96.3 0.012 4.2E-07 55.4 8.7 100 295-404 9-123 (190)
46 2rk3_A Protein DJ-1; parkinson 96.2 0.0081 2.8E-07 57.2 7.1 103 296-404 4-114 (197)
47 4hcj_A THIJ/PFPI domain protei 95.9 0.0056 1.9E-07 58.3 4.5 47 358-404 67-116 (177)
48 3of5_A Dethiobiotin synthetase 95.9 0.018 6.1E-07 56.7 8.2 193 1-243 4-206 (228)
49 4e08_A DJ-1 beta; flavodoxin-l 95.9 0.015 5.1E-07 55.1 7.4 101 296-404 6-115 (190)
50 2ab0_A YAJL; DJ-1/THIJ superfa 95.7 0.015 5E-07 56.0 6.6 100 296-403 3-114 (205)
51 3er6_A Putative transcriptiona 95.7 0.019 6.3E-07 55.6 7.1 105 294-404 7-123 (209)
52 1hyq_A MIND, cell division inh 95.4 0.092 3.2E-06 51.3 11.3 41 1-42 2-42 (263)
53 3l3b_A ES1 family protein; ssg 95.4 0.013 4.3E-07 58.6 4.9 47 359-405 106-167 (242)
54 3fgn_A Dethiobiotin synthetase 95.1 0.044 1.5E-06 55.0 8.0 167 1-218 26-195 (251)
55 1xjc_A MOBB protein homolog; s 95.1 0.023 8E-07 53.8 5.6 44 1-46 4-48 (169)
56 3cne_A Putative protease I; st 94.9 0.019 6.5E-07 53.4 4.2 46 359-404 65-119 (175)
57 2ph1_A Nucleotide-binding prot 94.8 0.21 7.1E-06 49.2 11.9 42 1-43 18-59 (262)
58 3ej6_A Catalase-3; heme, hydro 94.8 0.1 3.5E-06 59.3 10.6 97 294-403 536-644 (688)
59 3uk7_A Class I glutamine amido 94.7 0.062 2.1E-06 56.7 8.1 47 358-404 280-329 (396)
60 3f5d_A Protein YDEA; unknow pr 94.7 0.044 1.5E-06 53.1 6.4 46 359-404 62-108 (206)
61 3k9g_A PF-32 protein; ssgcid, 94.7 0.08 2.7E-06 52.1 8.4 42 1-44 27-68 (267)
62 1vhq_A Enhancing lycopene bios 94.6 0.02 7E-07 56.1 3.7 47 359-405 89-149 (232)
63 2fex_A Conserved hypothetical 94.5 0.017 6E-07 54.5 3.1 46 359-404 62-109 (188)
64 2xj4_A MIPZ; replication, cell 94.4 0.26 9E-06 49.3 11.6 40 2-42 5-44 (286)
65 3uk7_A Class I glutamine amido 94.3 0.063 2.1E-06 56.6 7.1 48 358-405 87-137 (396)
66 3en0_A Cyanophycinase; serine 94.3 0.06 2E-06 55.3 6.7 109 280-403 43-159 (291)
67 3efe_A THIJ/PFPI family protei 94.2 0.06 2.1E-06 52.1 6.2 46 359-404 73-120 (212)
68 3ot1_A 4-methyl-5(B-hydroxyeth 94.2 0.047 1.6E-06 52.6 5.3 98 296-403 10-119 (208)
69 2xxa_A Signal recognition part 94.1 0.48 1.7E-05 51.0 13.7 41 2-44 101-142 (433)
70 1u9c_A APC35852; structural ge 94.1 0.032 1.1E-06 54.0 3.9 45 359-403 88-136 (224)
71 3fse_A Two-domain protein cont 94.0 0.1 3.4E-06 55.3 7.8 102 295-404 10-120 (365)
72 3ttv_A Catalase HPII; heme ori 93.9 0.099 3.4E-06 60.0 7.9 101 294-403 599-706 (753)
73 3gra_A Transcriptional regulat 93.8 0.073 2.5E-06 51.1 5.9 47 358-404 69-116 (202)
74 3kjh_A CO dehydrogenase/acetyl 93.8 0.14 4.8E-06 48.9 7.9 39 1-42 1-39 (254)
75 3ea0_A ATPase, para family; al 93.7 0.11 3.7E-06 50.0 6.9 41 1-42 4-45 (245)
76 3cio_A ETK, tyrosine-protein k 93.6 0.19 6.4E-06 51.2 8.7 153 1-217 104-274 (299)
77 3dm5_A SRP54, signal recogniti 93.3 0.83 2.8E-05 49.5 13.7 40 2-43 101-140 (443)
78 1rw7_A YDR533CP; alpha-beta sa 92.8 0.034 1.2E-06 54.9 1.8 45 359-403 97-145 (243)
79 2g0t_A Conserved hypothetical 92.8 0.15 5.1E-06 53.7 6.7 41 1-42 169-209 (350)
80 3noq_A THIJ/PFPI family protei 92.8 0.094 3.2E-06 51.6 4.9 102 295-404 5-112 (231)
81 3n7t_A Macrophage binding prot 92.8 0.044 1.5E-06 54.8 2.5 45 359-403 104-152 (247)
82 3kl4_A SRP54, signal recogniti 92.7 1.1 3.8E-05 48.4 13.5 39 2-42 98-136 (433)
83 3kkl_A Probable chaperone prot 92.5 0.049 1.7E-06 54.3 2.4 45 359-403 97-145 (244)
84 2iuf_A Catalase; oxidoreductas 92.0 0.24 8.4E-06 56.4 7.6 96 295-403 529-646 (688)
85 3end_A Light-independent proto 91.5 0.25 8.7E-06 49.6 6.4 43 1-45 41-83 (307)
86 3mgk_A Intracellular protease/ 91.2 0.1 3.6E-06 50.4 3.0 46 358-403 63-111 (211)
87 1n57_A Chaperone HSP31, protei 91.0 0.076 2.6E-06 54.2 1.9 46 358-403 143-192 (291)
88 1sy7_A Catalase 1; heme oxidat 90.6 0.45 1.5E-05 54.5 7.9 103 295-405 534-644 (715)
89 3fkq_A NTRC-like two-domain pr 90.0 2 6.8E-05 44.7 11.8 44 1-45 143-186 (373)
90 3ewn_A THIJ/PFPI family protei 89.9 0.19 6.5E-06 50.3 3.7 102 295-404 23-132 (253)
91 2ffh_A Protein (FFH); SRP54, s 89.4 3 0.0001 44.8 12.8 40 2-43 99-138 (425)
92 4gdh_A DJ-1, uncharacterized p 89.2 0.36 1.2E-05 46.0 4.9 101 296-402 5-120 (194)
93 1ihu_A Arsenical pump-driving 89.1 0.53 1.8E-05 52.1 6.9 41 4-45 329-369 (589)
94 3q9l_A Septum site-determining 89.0 0.53 1.8E-05 45.5 6.1 40 1-41 2-41 (260)
95 1np6_A Molybdopterin-guanine d 88.9 0.51 1.7E-05 44.4 5.7 44 1-46 6-50 (174)
96 1g3q_A MIND ATPase, cell divis 88.8 0.56 1.9E-05 44.7 6.0 41 1-42 2-42 (237)
97 2afh_E Nitrogenase iron protei 86.4 0.89 3E-05 45.2 6.0 42 1-44 2-43 (289)
98 1cp2_A CP2, nitrogenase iron p 86.4 0.82 2.8E-05 44.6 5.7 42 1-44 1-42 (269)
99 1z0s_A Probable inorganic poly 85.8 0.44 1.5E-05 48.6 3.4 72 295-398 29-100 (278)
100 3zq6_A Putative arsenical pump 85.1 0.74 2.5E-05 47.1 4.8 41 1-42 13-53 (324)
101 3fwy_A Light-independent proto 84.7 1.3 4.4E-05 45.6 6.3 44 1-46 48-91 (314)
102 1wcv_1 SOJ, segregation protei 82.9 1.2 4.1E-05 43.4 5.1 43 1-44 6-48 (257)
103 3ug7_A Arsenical pump-driving 81.5 1.5 5E-05 45.5 5.3 41 1-42 25-65 (349)
104 3pg5_A Uncharacterized protein 81.5 1.5 5E-05 45.6 5.4 45 1-46 1-45 (361)
105 1nks_A Adenylate kinase; therm 81.0 1.1 3.8E-05 40.8 3.8 36 1-38 1-36 (194)
106 1byi_A Dethiobiotin synthase; 79.1 2.3 7.9E-05 40.0 5.4 40 1-43 1-40 (224)
107 3pfn_A NAD kinase; structural 79.0 1.6 5.6E-05 46.1 4.7 90 296-398 39-141 (365)
108 1ls1_A Signal recognition part 78.5 13 0.00046 37.3 11.3 40 2-43 99-138 (295)
109 3bhn_A THIJ/PFPI domain protei 76.6 0.56 1.9E-05 46.4 0.3 99 295-404 20-127 (236)
110 3io3_A DEHA2D07832P; chaperone 76.2 2.4 8.1E-05 44.3 5.0 40 1-42 18-59 (348)
111 2oze_A ORF delta'; para, walke 76.0 2.4 8E-05 42.1 4.7 42 3-44 36-78 (298)
112 3iqw_A Tail-anchored protein t 76.0 2.3 7.9E-05 44.1 4.8 40 2-43 17-56 (334)
113 1ihu_A Arsenical pump-driving 75.0 2.9 9.8E-05 46.2 5.5 40 1-42 8-47 (589)
114 3bfv_A CAPA1, CAPB2, membrane 73.9 4 0.00014 40.7 5.7 41 1-42 82-122 (271)
115 4b4o_A Epimerase family protei 73.4 3.3 0.00011 40.7 5.0 34 1-41 1-34 (298)
116 2f1r_A Molybdopterin-guanine d 73.0 2.6 8.8E-05 39.4 3.9 40 1-42 2-41 (171)
117 2woo_A ATPase GET3; tail-ancho 72.8 2.8 9.7E-05 42.9 4.5 40 3-43 20-59 (329)
118 2woj_A ATPase GET3; tail-ancho 72.8 2.4 8.1E-05 44.2 3.9 42 2-44 18-61 (354)
119 2z0h_A DTMP kinase, thymidylat 71.6 4.7 0.00016 36.8 5.3 33 2-36 1-33 (197)
120 3cwq_A Para family chromosome 71.3 4 0.00014 38.7 4.8 40 3-44 2-41 (209)
121 3guy_A Short-chain dehydrogena 70.0 2.3 7.9E-05 40.4 2.9 34 1-40 1-34 (230)
122 1gtv_A TMK, thymidylate kinase 69.9 1.9 6.5E-05 40.2 2.2 36 2-39 1-36 (214)
123 1u0t_A Inorganic polyphosphate 67.5 4.9 0.00017 40.9 4.8 94 296-398 5-108 (307)
124 3ksm_A ABC-type sugar transpor 66.9 18 0.00062 34.2 8.6 86 296-395 1-90 (276)
125 2obn_A Hypothetical protein; s 65.2 27 0.00093 36.5 10.0 153 1-222 152-312 (349)
126 1zu4_A FTSY; GTPase, signal re 64.1 9.1 0.00031 39.3 6.1 39 2-42 106-144 (320)
127 2oyn_A Hypothetical protein MJ 63.4 2.8 9.6E-05 38.8 1.9 41 2-42 5-53 (146)
128 4fyk_A Deoxyribonucleoside 5'- 63.4 15 0.00051 34.1 6.8 94 296-397 3-102 (152)
129 2v3c_C SRP54, signal recogniti 62.5 4.2 0.00015 43.6 3.4 40 2-43 100-139 (432)
130 1fjh_A 3alpha-hydroxysteroid d 62.2 5.8 0.0002 38.0 4.0 34 1-40 1-34 (257)
131 3la6_A Tyrosine-protein kinase 61.9 7.8 0.00027 39.0 5.0 40 2-42 93-132 (286)
132 1zmt_A Haloalcohol dehalogenas 61.3 5.8 0.0002 38.4 3.8 31 1-37 1-31 (254)
133 1eiw_A Hypothetical protein MT 60.1 5.8 0.0002 34.9 3.2 39 357-395 35-73 (111)
134 2pbr_A DTMP kinase, thymidylat 60.0 8.1 0.00028 34.9 4.4 34 2-37 1-34 (195)
135 2i2c_A Probable inorganic poly 58.9 5.2 0.00018 40.0 3.1 36 359-399 34-71 (272)
136 1vma_A Cell division protein F 58.7 13 0.00045 37.8 6.1 40 2-43 105-144 (306)
137 3jy6_A Transcriptional regulat 58.0 41 0.0014 32.0 9.3 84 294-396 6-92 (276)
138 3l49_A ABC sugar (ribose) tran 57.7 43 0.0015 32.0 9.4 86 294-395 4-92 (291)
139 2an1_A Putative kinase; struct 57.4 8.8 0.0003 38.4 4.5 89 296-398 6-96 (292)
140 2px0_A Flagellar biosynthesis 57.2 11 0.00036 38.2 5.1 38 3-42 107-145 (296)
141 3l6u_A ABC-type sugar transpor 56.1 45 0.0016 31.8 9.3 86 294-395 7-95 (293)
142 1rz3_A Hypothetical protein rb 56.0 14 0.00047 34.5 5.4 40 2-43 23-62 (201)
143 3ez2_A Plasmid partition prote 55.3 14 0.00049 38.3 5.8 43 1-44 108-156 (398)
144 3gbv_A Putative LACI-family tr 55.2 52 0.0018 31.4 9.6 90 294-396 7-101 (304)
145 3gv0_A Transcriptional regulat 54.6 32 0.0011 33.1 8.0 86 294-395 7-95 (288)
146 3k4h_A Putative transcriptiona 54.6 35 0.0012 32.7 8.2 31 359-395 68-98 (292)
147 3a4m_A L-seryl-tRNA(SEC) kinas 54.3 11 0.00038 36.8 4.5 39 1-41 4-42 (260)
148 8abp_A L-arabinose-binding pro 54.0 45 0.0015 32.1 8.9 84 295-395 2-88 (306)
149 1nn5_A Similar to deoxythymidy 53.9 14 0.00046 34.2 4.9 34 2-37 10-43 (215)
150 1j8m_F SRP54, signal recogniti 53.4 16 0.00054 37.0 5.6 40 2-43 99-138 (297)
151 3l77_A Short-chain alcohol deh 52.7 9.4 0.00032 36.1 3.6 33 1-39 2-34 (235)
152 2rgy_A Transcriptional regulat 51.8 57 0.002 31.3 9.3 32 359-396 66-97 (290)
153 3cs3_A Sugar-binding transcrip 51.5 34 0.0011 32.7 7.5 79 294-395 7-86 (277)
154 4edh_A DTMP kinase, thymidylat 51.3 17 0.00058 34.9 5.2 35 2-38 7-41 (213)
155 3ez9_A Para; DNA binding, wing 51.2 12 0.00041 39.0 4.5 45 1-46 111-161 (403)
156 3igf_A ALL4481 protein; two-do 51.0 13 0.00046 39.0 4.8 39 1-42 2-40 (374)
157 4f2g_A Otcase 1, ornithine car 51.0 65 0.0022 33.0 9.8 131 193-366 86-222 (309)
158 3ff4_A Uncharacterized protein 50.9 13 0.00046 32.8 4.1 38 359-402 81-118 (122)
159 3rot_A ABC sugar transporter, 50.1 63 0.0022 31.1 9.3 87 295-395 3-92 (297)
160 2ef0_A Ornithine carbamoyltran 50.1 87 0.003 32.0 10.5 157 158-368 62-221 (301)
161 3kts_A Glycerol uptake operon 49.8 17 0.00057 35.0 4.8 78 112-216 11-88 (192)
162 2j37_W Signal recognition part 49.3 20 0.0007 39.2 6.0 40 2-43 102-141 (504)
163 3qk7_A Transcriptional regulat 48.8 33 0.0011 33.2 7.0 85 294-395 5-94 (294)
164 4e4y_A Short chain dehydrogena 48.7 8.7 0.0003 36.8 2.7 35 1-40 4-38 (244)
165 3l6e_A Oxidoreductase, short-c 48.5 12 0.0004 35.9 3.6 33 1-39 3-35 (235)
166 3d02_A Putative LACI-type tran 48.5 76 0.0026 30.4 9.6 88 294-396 3-93 (303)
167 3llv_A Exopolyphosphatase-rela 48.3 13 0.00044 32.3 3.5 33 2-41 7-39 (141)
168 2ph3_A 3-oxoacyl-[acyl carrier 48.2 9.9 0.00034 35.9 3.0 31 1-37 1-31 (245)
169 2fep_A Catabolite control prot 48.0 77 0.0026 30.4 9.5 32 359-396 71-102 (289)
170 1kht_A Adenylate kinase; phosp 48.0 16 0.00055 32.8 4.3 34 2-37 4-37 (192)
171 3h2s_A Putative NADH-flavin re 47.9 18 0.0006 33.5 4.7 34 1-41 1-34 (224)
172 3ew7_A LMO0794 protein; Q8Y8U8 47.8 20 0.0007 32.8 5.0 34 1-41 1-34 (221)
173 3gd5_A Otcase, ornithine carba 47.7 84 0.0029 32.4 10.1 98 193-327 89-186 (323)
174 1t0b_A THUA-like protein; treh 47.4 52 0.0018 32.5 8.2 86 295-398 7-106 (252)
175 1zmo_A Halohydrin dehalogenase 47.3 14 0.00047 35.4 3.9 31 1-37 1-31 (244)
176 3uug_A Multiple sugar-binding 46.7 63 0.0022 31.5 8.8 85 295-395 3-90 (330)
177 3kb2_A SPBC2 prophage-derived 46.3 14 0.00049 32.6 3.6 25 1-27 1-25 (173)
178 3r7f_A Aspartate carbamoyltran 45.9 1.5E+02 0.005 30.4 11.4 126 158-327 53-178 (304)
179 4hf7_A Putative acylhydrolase; 45.7 25 0.00087 32.6 5.4 61 118-186 63-130 (209)
180 2wwf_A Thymidilate kinase, put 45.7 22 0.00074 32.7 4.9 34 2-37 11-44 (212)
181 3bbl_A Regulatory protein of L 45.5 54 0.0018 31.5 7.9 32 359-396 63-94 (287)
182 3hp4_A GDSL-esterase; psychrot 45.4 30 0.001 30.7 5.7 76 90-175 20-104 (185)
183 3i4f_A 3-oxoacyl-[acyl-carrier 45.3 13 0.00044 35.8 3.3 31 1-37 7-37 (264)
184 3o74_A Fructose transport syst 44.8 65 0.0022 30.2 8.3 84 295-395 2-88 (272)
185 1p3d_A UDP-N-acetylmuramate--a 44.4 23 0.00079 37.9 5.5 57 2-64 119-175 (475)
186 2yvu_A Probable adenylyl-sulfa 44.4 21 0.00073 32.4 4.5 39 2-42 14-52 (186)
187 3bos_A Putative DNA replicatio 44.3 35 0.0012 31.5 6.1 59 3-63 54-112 (242)
188 3orf_A Dihydropteridine reduct 44.2 17 0.00057 35.0 4.0 34 2-41 23-56 (251)
189 3uce_A Dehydrogenase; rossmann 44.2 11 0.00036 35.6 2.5 33 2-40 7-39 (223)
190 2x5o_A UDP-N-acetylmuramoylala 43.9 27 0.00093 36.9 5.9 55 2-70 105-164 (439)
191 3clk_A Transcription regulator 43.7 41 0.0014 32.3 6.7 85 294-396 7-95 (290)
192 1pvv_A Otcase, ornithine carba 43.5 1.5E+02 0.0051 30.4 11.2 157 158-368 63-231 (315)
193 3e61_A Putative transcriptiona 43.5 45 0.0016 31.6 7.0 82 294-395 7-92 (277)
194 3tb6_A Arabinose metabolism tr 43.2 79 0.0027 30.0 8.7 88 296-396 16-106 (298)
195 2fn9_A Ribose ABC transporter, 43.2 1E+02 0.0036 29.2 9.6 33 359-395 57-89 (290)
196 2jah_A Clavulanic acid dehydro 42.9 15 0.00053 35.2 3.5 32 2-39 8-39 (247)
197 3ged_A Short-chain dehydrogena 42.7 15 0.00053 36.2 3.5 33 2-40 3-35 (247)
198 4ep1_A Otcase, ornithine carba 42.3 1.2E+02 0.0042 31.5 10.3 122 158-327 87-208 (340)
199 1w78_A FOLC bifunctional prote 42.2 25 0.00087 36.8 5.3 32 2-37 50-81 (422)
200 3e03_A Short chain dehydrogena 42.2 18 0.0006 35.4 3.8 31 2-38 7-37 (274)
201 4f67_A UPF0176 protein LPG2838 42.1 15 0.00052 36.8 3.3 62 2-71 183-247 (265)
202 2f00_A UDP-N-acetylmuramate--L 42.0 26 0.00089 37.7 5.5 57 2-64 120-176 (491)
203 3kjx_A Transcriptional regulat 41.9 97 0.0033 30.6 9.4 84 294-395 67-153 (344)
204 3h7a_A Short chain dehydrogena 41.9 18 0.00061 35.0 3.8 32 2-39 8-39 (252)
205 2gk3_A Putative cytoplasmic pr 41.9 14 0.00049 36.4 3.1 71 311-395 42-124 (256)
206 3huu_A Transcription regulator 41.7 53 0.0018 31.8 7.3 31 359-395 82-112 (305)
207 1j6u_A UDP-N-acetylmuramate-al 41.7 33 0.0011 36.7 6.2 38 2-44 115-152 (469)
208 3egc_A Putative ribose operon 41.7 39 0.0013 32.5 6.2 84 294-395 7-93 (291)
209 3m9w_A D-xylose-binding peripl 41.6 81 0.0028 30.6 8.6 33 359-395 57-89 (313)
210 3g1w_A Sugar ABC transporter; 41.5 1E+02 0.0035 29.5 9.3 86 295-395 4-92 (305)
211 3i1j_A Oxidoreductase, short c 41.1 16 0.00055 34.6 3.3 32 2-39 15-46 (247)
212 3d8u_A PURR transcriptional re 40.9 62 0.0021 30.5 7.5 31 359-395 58-88 (275)
213 3o1i_D Periplasmic protein TOR 40.9 67 0.0023 30.7 7.8 87 294-395 4-93 (304)
214 3o26_A Salutaridine reductase; 40.7 16 0.00056 35.6 3.3 32 2-39 13-44 (311)
215 3vtz_A Glucose 1-dehydrogenase 40.5 18 0.00063 35.3 3.6 33 2-40 15-47 (269)
216 1jbw_A Folylpolyglutamate synt 40.5 25 0.00086 37.0 4.9 32 2-37 40-71 (428)
217 3zv4_A CIS-2,3-dihydrobiphenyl 40.4 17 0.00059 35.7 3.5 30 2-37 6-35 (281)
218 3tpc_A Short chain alcohol deh 40.1 20 0.0007 34.4 3.8 32 2-39 8-39 (257)
219 3afo_A NADH kinase POS5; alpha 39.7 13 0.00045 39.4 2.6 36 358-398 112-148 (388)
220 3lf2_A Short chain oxidoreduct 39.7 18 0.00063 35.0 3.5 32 2-39 9-40 (265)
221 3t4x_A Oxidoreductase, short c 39.7 17 0.00057 35.4 3.2 32 2-39 11-42 (267)
222 3p19_A BFPVVD8, putative blue 39.2 19 0.00064 35.2 3.5 31 2-38 17-47 (266)
223 3rwb_A TPLDH, pyridoxal 4-dehy 39.0 18 0.0006 34.8 3.2 30 2-37 7-36 (247)
224 4e5v_A Putative THUA-like prot 39.0 1E+02 0.0036 30.8 9.0 89 294-399 3-96 (281)
225 3asu_A Short-chain dehydrogena 39.0 23 0.00079 34.0 4.0 31 2-38 1-31 (248)
226 3gvc_A Oxidoreductase, probabl 39.0 21 0.0007 35.2 3.7 32 2-39 30-61 (277)
227 2dkn_A 3-alpha-hydroxysteroid 38.9 30 0.001 32.4 4.8 34 1-40 1-34 (255)
228 2ekp_A 2-deoxy-D-gluconate 3-d 38.9 23 0.00079 33.6 4.0 33 2-40 3-35 (239)
229 3sho_A Transcriptional regulat 38.8 1.7E+02 0.0059 26.2 9.9 93 280-397 27-122 (187)
230 1wma_A Carbonyl reductase [NAD 38.6 21 0.00072 33.9 3.6 34 1-40 4-38 (276)
231 3nyw_A Putative oxidoreductase 38.6 17 0.00058 35.1 3.0 32 2-39 8-39 (250)
232 2hq1_A Glucose/ribitol dehydro 38.3 19 0.00066 33.9 3.3 30 2-37 6-35 (247)
233 3lv8_A DTMP kinase, thymidylat 38.3 31 0.0011 33.8 4.8 35 2-38 28-63 (236)
234 3pxx_A Carveol dehydrogenase; 38.2 20 0.00068 34.8 3.4 33 2-40 11-43 (287)
235 3hcw_A Maltose operon transcri 38.1 64 0.0022 31.1 7.2 31 359-395 67-97 (295)
236 2dtx_A Glucose 1-dehydrogenase 38.0 23 0.00078 34.4 3.9 34 2-41 9-42 (264)
237 3ppi_A 3-hydroxyacyl-COA dehyd 38.0 22 0.00076 34.6 3.8 32 2-39 31-62 (281)
238 4imr_A 3-oxoacyl-(acyl-carrier 37.9 21 0.00071 35.1 3.5 31 2-38 34-64 (275)
239 4dmm_A 3-oxoacyl-[acyl-carrier 37.8 19 0.00064 35.2 3.2 29 2-36 29-57 (269)
240 2d1y_A Hypothetical protein TT 37.7 23 0.00079 34.0 3.8 33 2-40 7-39 (256)
241 3m1a_A Putative dehydrogenase; 37.5 22 0.00074 34.6 3.6 32 1-38 5-36 (281)
242 3lyl_A 3-oxoacyl-(acyl-carrier 37.5 20 0.00069 34.0 3.3 31 2-38 6-36 (247)
243 2fwm_X 2,3-dihydro-2,3-dihydro 37.4 24 0.00081 33.8 3.8 34 2-41 8-41 (250)
244 3ezl_A Acetoacetyl-COA reducta 37.4 20 0.00067 34.3 3.2 29 2-36 14-42 (256)
245 3nrs_A Dihydrofolate:folylpoly 37.4 27 0.00094 37.0 4.6 32 2-37 53-84 (437)
246 4e3z_A Putative oxidoreductase 37.3 20 0.00067 34.8 3.3 30 1-36 26-55 (272)
247 2cfc_A 2-(R)-hydroxypropyl-COM 37.3 22 0.00076 33.6 3.6 31 2-38 3-33 (250)
248 3f9i_A 3-oxoacyl-[acyl-carrier 37.0 20 0.00067 34.1 3.1 31 2-38 15-45 (249)
249 4b79_A PA4098, probable short- 37.0 24 0.00082 34.8 3.8 33 2-40 12-44 (242)
250 4eso_A Putative oxidoreductase 36.8 22 0.00074 34.4 3.5 32 2-39 9-40 (255)
251 3tsc_A Putative oxidoreductase 36.8 22 0.00074 34.7 3.5 32 2-39 12-43 (277)
252 1vl8_A Gluconate 5-dehydrogena 36.7 21 0.00073 34.7 3.4 32 2-39 22-53 (267)
253 4a0g_A Adenosylmethionine-8-am 36.7 28 0.00095 40.4 4.9 36 2-38 35-75 (831)
254 3tfo_A Putative 3-oxoacyl-(acy 36.6 21 0.0007 35.1 3.3 33 2-40 5-37 (264)
255 2pjk_A 178AA long hypothetical 36.6 43 0.0015 31.3 5.3 47 111-166 59-106 (178)
256 1o5z_A Folylpolyglutamate synt 36.4 31 0.001 36.7 4.8 32 2-37 53-84 (442)
257 1ooe_A Dihydropteridine reduct 36.4 26 0.00089 33.1 3.9 34 2-41 4-37 (236)
258 1vjn_A Zn-dependent hydrolase 36.3 38 0.0013 32.3 5.0 71 139-219 138-208 (220)
259 2fvy_A D-galactose-binding per 36.2 1.3E+02 0.0045 28.7 9.1 86 295-396 2-91 (309)
260 3kke_A LACI family transcripti 36.1 94 0.0032 30.1 8.0 31 359-395 70-100 (303)
261 2ew8_A (S)-1-phenylethanol deh 36.1 26 0.00087 33.6 3.8 33 2-40 8-40 (249)
262 3op4_A 3-oxoacyl-[acyl-carrier 36.1 22 0.00074 34.2 3.3 31 2-38 10-40 (248)
263 3rkr_A Short chain oxidoreduct 36.0 21 0.00073 34.4 3.3 31 2-38 30-60 (262)
264 4iiu_A 3-oxoacyl-[acyl-carrier 36.0 22 0.00074 34.4 3.3 29 2-36 27-55 (267)
265 3s55_A Putative short-chain de 36.0 22 0.00077 34.6 3.4 33 2-40 11-43 (281)
266 3ai3_A NADPH-sorbose reductase 35.9 23 0.00079 34.1 3.5 31 2-38 8-38 (263)
267 2h3h_A Sugar ABC transporter, 35.8 1.3E+02 0.0045 29.1 9.1 34 359-396 56-89 (313)
268 3a28_C L-2.3-butanediol dehydr 35.8 22 0.00074 34.2 3.3 32 2-39 3-34 (258)
269 3oid_A Enoyl-[acyl-carrier-pro 35.7 22 0.00075 34.4 3.3 29 2-36 5-33 (258)
270 3tzq_B Short-chain type dehydr 35.7 26 0.00089 34.1 3.8 32 2-39 12-43 (271)
271 3tl3_A Short-chain type dehydr 35.5 20 0.00069 34.4 3.0 30 2-37 10-39 (257)
272 2uvd_A 3-oxoacyl-(acyl-carrier 35.4 22 0.00075 33.9 3.2 30 2-37 5-34 (246)
273 4tmk_A Protein (thymidylate ki 35.3 38 0.0013 32.5 4.8 33 2-36 4-37 (213)
274 3f1l_A Uncharacterized oxidore 35.2 24 0.00082 33.9 3.5 31 2-38 13-43 (252)
275 3d3w_A L-xylulose reductase; u 35.2 24 0.00083 33.2 3.4 33 2-40 8-40 (244)
276 2rhc_B Actinorhodin polyketide 35.2 24 0.00081 34.5 3.5 32 2-39 23-54 (277)
277 1g5t_A COB(I)alamin adenosyltr 35.1 22 0.00074 34.2 3.1 29 13-41 36-66 (196)
278 4eyg_A Twin-arginine transloca 35.1 1.4E+02 0.0047 29.4 9.2 92 293-397 4-104 (368)
279 2x7x_A Sensor protein; transfe 35.0 2E+02 0.0068 28.0 10.4 85 294-395 5-93 (325)
280 3pk0_A Short-chain dehydrogena 35.0 22 0.00075 34.5 3.2 32 2-39 11-42 (262)
281 2p67_A LAO/AO transport system 34.9 1.5E+02 0.0052 29.9 9.7 40 2-43 57-96 (341)
282 3dii_A Short-chain dehydrogena 34.9 26 0.00088 33.6 3.6 32 2-39 3-34 (247)
283 2o20_A Catabolite control prot 34.9 1.5E+02 0.0053 28.9 9.5 31 359-395 118-148 (332)
284 3p32_A Probable GTPase RV1496/ 34.8 49 0.0017 33.9 5.9 41 3-45 81-121 (355)
285 3ioy_A Short-chain dehydrogena 34.8 28 0.00096 35.0 4.0 32 2-39 9-40 (319)
286 3qiv_A Short-chain dehydrogena 34.7 25 0.00084 33.5 3.4 31 2-38 10-40 (253)
287 4dqx_A Probable oxidoreductase 34.6 24 0.00083 34.6 3.4 31 2-38 28-58 (277)
288 3ijr_A Oxidoreductase, short c 34.6 27 0.00093 34.5 3.8 32 2-39 48-79 (291)
289 2ag5_A DHRS6, dehydrogenase/re 34.6 24 0.00081 33.7 3.3 33 2-40 7-39 (246)
290 1iy8_A Levodione reductase; ox 34.5 25 0.00084 34.0 3.4 31 2-38 14-44 (267)
291 3icc_A Putative 3-oxoacyl-(acy 34.5 23 0.00079 33.6 3.2 29 2-36 8-36 (255)
292 1mxh_A Pteridine reductase 2; 34.5 23 0.00078 34.3 3.2 30 2-37 12-41 (276)
293 2nwq_A Probable short-chain de 34.5 31 0.0011 33.8 4.2 33 2-40 22-54 (272)
294 1e7w_A Pteridine reductase; di 34.4 22 0.00077 35.0 3.2 31 2-38 10-40 (291)
295 3t7c_A Carveol dehydrogenase; 34.4 24 0.00084 34.9 3.5 34 2-41 29-62 (299)
296 3uve_A Carveol dehydrogenase ( 34.4 25 0.00085 34.4 3.5 33 2-40 12-44 (286)
297 3r1i_A Short-chain type dehydr 34.4 27 0.00093 34.2 3.8 30 2-37 33-62 (276)
298 3grf_A Ornithine carbamoyltran 34.3 1.6E+02 0.0054 30.4 9.6 105 193-327 86-191 (328)
299 3gk3_A Acetoacetyl-COA reducta 34.3 22 0.00074 34.5 3.0 29 2-36 26-54 (269)
300 2i6u_A Otcase, ornithine carba 34.3 3.3E+02 0.011 27.7 12.0 130 158-340 56-185 (307)
301 3tjr_A Short chain dehydrogena 34.3 24 0.00083 35.0 3.4 31 2-38 32-62 (301)
302 3un1_A Probable oxidoreductase 34.2 28 0.00097 33.7 3.8 33 2-40 29-61 (260)
303 3dqp_A Oxidoreductase YLBE; al 34.2 33 0.0011 31.7 4.2 34 1-41 1-34 (219)
304 2ae2_A Protein (tropinone redu 34.2 26 0.00088 33.8 3.5 33 2-40 10-42 (260)
305 3ek2_A Enoyl-(acyl-carrier-pro 34.1 30 0.001 33.0 4.0 31 2-37 15-46 (271)
306 1jx6_A LUXP protein; protein-l 34.1 1.6E+02 0.0054 28.8 9.4 90 293-395 41-134 (342)
307 3sx2_A Putative 3-ketoacyl-(ac 34.0 25 0.00087 34.1 3.5 32 2-39 14-45 (278)
308 3rht_A (gatase1)-like protein; 33.9 1.3E+02 0.0045 29.8 8.7 81 296-395 5-85 (259)
309 2o23_A HADH2 protein; HSD17B10 33.9 29 0.001 33.0 3.8 32 2-39 13-44 (265)
310 3v2g_A 3-oxoacyl-[acyl-carrier 33.9 25 0.00087 34.4 3.4 30 2-37 32-61 (271)
311 3ksu_A 3-oxoacyl-acyl carrier 33.8 20 0.00068 34.8 2.6 30 2-37 12-41 (262)
312 3gem_A Short chain dehydrogena 33.8 22 0.00075 34.6 2.9 33 2-40 28-60 (260)
313 2wsb_A Galactitol dehydrogenas 33.7 26 0.0009 33.1 3.4 31 2-38 12-42 (254)
314 3ftp_A 3-oxoacyl-[acyl-carrier 33.7 24 0.00081 34.6 3.2 30 2-37 29-58 (270)
315 1h5q_A NADP-dependent mannitol 33.6 27 0.00092 33.2 3.5 30 2-37 15-44 (265)
316 3rd5_A Mypaa.01249.C; ssgcid, 33.5 26 0.0009 34.3 3.5 33 2-40 17-49 (291)
317 2qq5_A DHRS1, dehydrogenase/re 33.5 25 0.00085 33.8 3.3 31 2-38 6-36 (260)
318 1spx_A Short-chain reductase f 33.3 24 0.00082 34.2 3.1 32 2-39 7-38 (278)
319 2hsg_A Glucose-resistance amyl 33.3 76 0.0026 31.2 6.9 31 359-395 115-145 (332)
320 1o5i_A 3-oxoacyl-(acyl carrier 33.3 27 0.00093 33.5 3.5 34 2-41 20-53 (249)
321 2iks_A DNA-binding transcripti 33.1 1.1E+02 0.0038 29.2 7.9 85 294-395 19-106 (293)
322 2plr_A DTMP kinase, probable t 33.1 41 0.0014 30.6 4.6 30 2-34 5-34 (213)
323 1e6c_A Shikimate kinase; phosp 33.1 26 0.00088 31.1 3.1 25 1-27 2-26 (173)
324 4dry_A 3-oxoacyl-[acyl-carrier 33.0 24 0.00083 34.7 3.1 31 2-38 34-64 (281)
325 1edo_A Beta-keto acyl carrier 32.9 26 0.00087 33.0 3.2 29 2-36 2-30 (244)
326 3o38_A Short chain dehydrogena 32.9 33 0.0011 33.0 4.0 33 2-39 23-55 (266)
327 1vlv_A Otcase, ornithine carba 32.9 2.5E+02 0.0086 28.8 10.9 123 158-327 75-197 (325)
328 3imf_A Short chain dehydrogena 32.9 25 0.00085 33.9 3.1 31 2-38 7-37 (257)
329 3ak4_A NADH-dependent quinucli 32.8 27 0.00094 33.5 3.4 32 2-39 13-44 (263)
330 2x9g_A PTR1, pteridine reducta 32.7 24 0.00084 34.5 3.1 32 2-39 24-55 (288)
331 1uls_A Putative 3-oxoacyl-acyl 32.7 28 0.00096 33.3 3.5 32 2-39 6-37 (245)
332 3v8b_A Putative dehydrogenase, 32.6 28 0.00094 34.3 3.5 31 2-38 29-59 (283)
333 1geg_A Acetoin reductase; SDR 32.6 28 0.00095 33.4 3.4 31 2-38 3-33 (256)
334 4e6p_A Probable sorbitol dehyd 32.6 28 0.00096 33.5 3.5 32 2-39 9-40 (259)
335 4gkb_A 3-oxoacyl-[acyl-carrier 32.4 31 0.0011 34.1 3.8 30 2-37 8-37 (258)
336 2q2v_A Beta-D-hydroxybutyrate 32.4 28 0.00096 33.4 3.4 30 2-37 5-34 (255)
337 3brs_A Periplasmic binding pro 32.4 78 0.0027 30.1 6.6 33 359-395 64-96 (289)
338 3ko8_A NAD-dependent epimerase 32.4 43 0.0015 32.6 4.8 33 1-40 1-33 (312)
339 3v9p_A DTMP kinase, thymidylat 32.4 36 0.0012 33.1 4.2 35 2-38 26-64 (227)
340 3uf0_A Short-chain dehydrogena 32.3 28 0.00096 34.1 3.4 30 2-37 32-61 (273)
341 1yo6_A Putative carbonyl reduc 32.3 28 0.00096 32.6 3.3 33 2-40 4-38 (250)
342 1yde_A Retinal dehydrogenase/r 32.3 28 0.00096 33.9 3.5 33 2-40 10-42 (270)
343 4fn4_A Short chain dehydrogena 32.2 28 0.00096 34.5 3.4 32 2-39 8-39 (254)
344 3svt_A Short-chain type dehydr 32.1 28 0.00097 33.9 3.4 33 2-40 12-44 (281)
345 2z1n_A Dehydrogenase; reductas 32.0 29 0.00098 33.4 3.4 31 2-38 8-38 (260)
346 3osu_A 3-oxoacyl-[acyl-carrier 32.0 28 0.00094 33.3 3.3 29 2-36 5-33 (246)
347 3v2h_A D-beta-hydroxybutyrate 32.0 30 0.001 34.0 3.6 29 2-36 26-54 (281)
348 3d6n_B Aspartate carbamoyltran 31.9 1.8E+02 0.0061 29.5 9.4 159 158-366 51-211 (291)
349 3tox_A Short chain dehydrogena 31.8 23 0.00079 34.9 2.7 31 2-38 9-39 (280)
350 3sc4_A Short chain dehydrogena 31.7 30 0.001 34.0 3.5 33 2-40 10-42 (285)
351 4hp8_A 2-deoxy-D-gluconate 3-d 31.7 30 0.001 34.2 3.5 30 2-37 10-39 (247)
352 2ptg_A Enoyl-acyl carrier redu 31.6 35 0.0012 33.9 4.1 32 2-38 10-42 (319)
353 4h15_A Short chain alcohol deh 31.5 28 0.00095 34.4 3.3 31 2-38 12-42 (261)
354 2r8r_A Sensor protein; KDPD, P 31.5 39 0.0013 33.3 4.2 32 11-42 14-45 (228)
355 3edm_A Short chain dehydrogena 31.4 30 0.001 33.4 3.4 30 2-37 9-38 (259)
356 4iin_A 3-ketoacyl-acyl carrier 31.4 27 0.00094 33.8 3.2 30 2-37 30-59 (271)
357 3is3_A 17BETA-hydroxysteroid d 31.4 28 0.00096 33.8 3.3 29 2-36 19-47 (270)
358 3h75_A Periplasmic sugar-bindi 31.4 48 0.0017 32.9 5.1 85 295-396 3-93 (350)
359 4g81_D Putative hexonate dehyd 31.3 23 0.00079 35.1 2.6 30 2-37 10-39 (255)
360 3rih_A Short chain dehydrogena 31.2 30 0.001 34.5 3.5 33 2-40 42-74 (293)
361 1uay_A Type II 3-hydroxyacyl-C 31.2 32 0.0011 32.1 3.6 34 2-41 3-36 (242)
362 3qlj_A Short chain dehydrogena 31.1 27 0.00092 35.0 3.2 30 2-37 28-57 (322)
363 1xu9_A Corticosteroid 11-beta- 31.0 29 0.00099 33.9 3.3 32 2-39 29-60 (286)
364 3ucx_A Short chain dehydrogena 31.0 37 0.0013 32.8 4.0 31 2-38 12-42 (264)
365 1orr_A CDP-tyvelose-2-epimeras 30.9 39 0.0013 33.3 4.3 31 1-37 1-31 (347)
366 2nm0_A Probable 3-oxacyl-(acyl 30.9 37 0.0012 32.8 4.0 33 2-40 22-54 (253)
367 3sju_A Keto reductase; short-c 30.8 31 0.001 33.8 3.5 31 2-38 25-55 (279)
368 2vos_A Folylpolyglutamate synt 30.7 44 0.0015 36.1 4.9 31 2-36 65-95 (487)
369 3bil_A Probable LACI-family tr 30.7 76 0.0026 31.7 6.5 31 359-395 121-151 (348)
370 3brq_A HTH-type transcriptiona 30.7 1.3E+02 0.0043 28.5 7.8 31 359-395 76-107 (296)
371 3uxy_A Short-chain dehydrogena 30.6 27 0.00094 34.0 3.0 31 2-38 29-59 (266)
372 2w37_A Ornithine carbamoyltran 30.6 2.9E+02 0.0097 28.9 10.9 100 192-327 107-206 (359)
373 3dhn_A NAD-dependent epimerase 30.6 49 0.0017 30.5 4.7 35 1-41 4-38 (227)
374 1uzm_A 3-oxoacyl-[acyl-carrier 30.5 33 0.0011 32.8 3.5 33 2-40 16-48 (247)
375 3c3k_A Alanine racemase; struc 30.4 1.2E+02 0.0039 29.0 7.5 31 359-396 63-93 (285)
376 2rjo_A Twin-arginine transloca 30.3 1.3E+02 0.0045 29.4 8.1 33 359-395 60-94 (332)
377 1sby_A Alcohol dehydrogenase; 30.3 35 0.0012 32.5 3.7 31 2-38 6-37 (254)
378 1x1t_A D(-)-3-hydroxybutyrate 30.2 31 0.0011 33.1 3.4 30 2-37 5-34 (260)
379 1ae1_A Tropinone reductase-I; 30.2 32 0.0011 33.4 3.5 32 2-39 22-53 (273)
380 2zat_A Dehydrogenase/reductase 30.1 31 0.0011 33.1 3.3 32 2-39 15-46 (260)
381 1xhl_A Short-chain dehydrogena 30.0 29 0.001 34.4 3.2 32 2-39 27-58 (297)
382 1yb1_A 17-beta-hydroxysteroid 29.9 32 0.0011 33.3 3.4 32 2-39 32-63 (272)
383 2h7i_A Enoyl-[acyl-carrier-pro 29.8 45 0.0015 32.2 4.4 33 2-39 8-41 (269)
384 3oec_A Carveol dehydrogenase ( 29.7 31 0.0011 34.6 3.3 31 2-38 47-77 (317)
385 1sny_A Sniffer CG10964-PA; alp 29.7 33 0.0011 32.8 3.4 34 1-40 21-57 (267)
386 2pez_A Bifunctional 3'-phospho 29.6 68 0.0023 28.7 5.4 34 2-37 6-39 (179)
387 1hdc_A 3-alpha, 20 beta-hydrox 29.6 32 0.0011 33.0 3.3 31 2-38 6-36 (254)
388 4ibo_A Gluconate dehydrogenase 29.5 26 0.00089 34.3 2.6 30 2-37 27-56 (271)
389 1gz6_A Estradiol 17 beta-dehyd 29.4 28 0.00096 35.1 2.9 30 2-37 10-39 (319)
390 1zem_A Xylitol dehydrogenase; 29.4 34 0.0012 33.0 3.4 32 2-39 8-39 (262)
391 3e3m_A Transcriptional regulat 29.2 1.5E+02 0.0053 29.3 8.5 31 359-395 125-155 (355)
392 3nrc_A Enoyl-[acyl-carrier-pro 29.1 46 0.0016 32.4 4.4 34 2-40 27-61 (280)
393 3cxt_A Dehydrogenase with diff 29.1 34 0.0012 33.9 3.5 31 2-38 35-65 (291)
394 3pgx_A Carveol dehydrogenase; 28.9 35 0.0012 33.2 3.5 32 2-39 16-47 (280)
395 3pzy_A MOG; ssgcid, seattle st 28.9 51 0.0017 30.4 4.4 45 111-166 46-91 (164)
396 3u5t_A 3-oxoacyl-[acyl-carrier 28.9 31 0.001 33.7 3.0 29 2-36 28-56 (267)
397 2v54_A DTMP kinase, thymidylat 28.9 32 0.0011 31.3 3.0 31 2-36 5-35 (204)
398 1ja9_A 4HNR, 1,3,6,8-tetrahydr 28.8 32 0.0011 32.8 3.2 30 2-37 22-51 (274)
399 3r3s_A Oxidoreductase; structu 28.8 35 0.0012 33.8 3.4 30 2-37 50-79 (294)
400 1uf9_A TT1252 protein; P-loop, 28.8 42 0.0015 30.4 3.8 27 1-33 8-34 (203)
401 3ld9_A DTMP kinase, thymidylat 28.7 58 0.002 31.6 4.9 38 2-41 22-60 (223)
402 1nff_A Putative oxidoreductase 28.7 35 0.0012 32.9 3.4 32 2-39 8-39 (260)
403 4da9_A Short-chain dehydrogena 28.7 35 0.0012 33.5 3.4 30 2-37 30-59 (280)
404 3lkv_A Uncharacterized conserv 28.6 97 0.0033 30.5 6.8 38 356-396 189-227 (302)
405 4fgs_A Probable dehydrogenase 28.6 35 0.0012 34.1 3.5 31 2-38 30-60 (273)
406 4fc7_A Peroxisomal 2,4-dienoyl 28.5 32 0.0011 33.6 3.1 30 2-37 28-57 (277)
407 2b4q_A Rhamnolipids biosynthes 28.5 33 0.0011 33.6 3.2 30 2-37 30-59 (276)
408 1odf_A YGR205W, hypothetical 3 28.4 44 0.0015 33.6 4.2 41 2-44 32-75 (290)
409 2o2s_A Enoyl-acyl carrier redu 28.4 40 0.0014 33.6 3.8 33 2-39 10-43 (315)
410 2c07_A 3-oxoacyl-(acyl-carrier 28.4 28 0.00094 34.1 2.6 31 2-38 45-75 (285)
411 2qh8_A Uncharacterized protein 28.2 1.1E+02 0.0037 29.8 6.9 82 297-395 142-226 (302)
412 1uj2_A Uridine-cytidine kinase 28.2 47 0.0016 31.9 4.2 24 2-27 23-46 (252)
413 3grp_A 3-oxoacyl-(acyl carrier 28.1 35 0.0012 33.3 3.3 31 2-38 28-58 (266)
414 1gee_A Glucose 1-dehydrogenase 28.1 35 0.0012 32.5 3.2 30 2-37 8-37 (261)
415 1yxm_A Pecra, peroxisomal tran 28.1 36 0.0012 33.3 3.4 31 2-38 19-49 (303)
416 3n74_A 3-ketoacyl-(acyl-carrie 28.0 38 0.0013 32.4 3.5 32 2-39 10-41 (261)
417 3tpf_A Otcase, ornithine carba 28.0 2.1E+02 0.007 29.3 9.1 98 192-326 76-174 (307)
418 4egf_A L-xylulose reductase; s 28.0 34 0.0012 33.2 3.1 32 2-39 21-52 (266)
419 3ctm_A Carbonyl reductase; alc 27.9 40 0.0014 32.5 3.7 31 2-38 35-65 (279)
420 2qhx_A Pteridine reductase 1; 27.9 33 0.0011 34.6 3.2 31 2-38 47-77 (328)
421 1hxh_A 3BETA/17BETA-hydroxyste 27.8 32 0.0011 33.0 2.9 30 2-37 7-36 (253)
422 1g0o_A Trihydroxynaphthalene r 27.8 38 0.0013 33.0 3.5 30 2-37 30-59 (283)
423 1zk4_A R-specific alcohol dehy 27.6 35 0.0012 32.2 3.1 32 2-39 7-38 (251)
424 1xq1_A Putative tropinone redu 27.6 35 0.0012 32.6 3.1 33 2-40 15-47 (266)
425 3u9l_A 3-oxoacyl-[acyl-carrier 27.6 41 0.0014 34.0 3.8 30 2-37 6-35 (324)
426 2h0a_A TTHA0807, transcription 27.4 69 0.0024 30.2 5.2 32 359-396 54-85 (276)
427 3dbi_A Sugar-binding transcrip 27.4 2E+02 0.0069 28.1 8.9 88 294-396 60-150 (338)
428 2vk2_A YTFQ, ABC transporter p 27.3 2.1E+02 0.0072 27.4 8.9 33 359-395 57-89 (306)
429 1fmc_A 7 alpha-hydroxysteroid 27.2 33 0.0011 32.4 2.8 31 2-38 12-42 (255)
430 4eaq_A DTMP kinase, thymidylat 27.1 51 0.0018 31.6 4.3 31 2-35 27-57 (229)
431 2pd4_A Enoyl-[acyl-carrier-pro 27.1 49 0.0017 32.0 4.2 33 2-39 7-40 (275)
432 2c20_A UDP-glucose 4-epimerase 26.9 58 0.002 31.9 4.7 32 1-38 1-32 (330)
433 2bgk_A Rhizome secoisolaricire 26.9 40 0.0014 32.3 3.5 31 2-38 17-47 (278)
434 2a4k_A 3-oxoacyl-[acyl carrier 26.9 40 0.0014 32.7 3.5 31 2-38 7-37 (263)
435 1m7g_A Adenylylsulfate kinase; 26.7 48 0.0016 30.8 3.9 37 2-40 26-63 (211)
436 2p5y_A UDP-glucose 4-epimerase 26.5 53 0.0018 32.0 4.3 30 1-37 1-30 (311)
437 1xkq_A Short-chain reductase f 26.5 37 0.0013 33.0 3.2 32 2-39 7-38 (280)
438 3k9c_A Transcriptional regulat 26.2 66 0.0022 30.9 4.9 81 294-395 11-94 (289)
439 2p91_A Enoyl-[acyl-carrier-pro 26.2 54 0.0018 31.9 4.3 32 2-38 22-54 (285)
440 2p2s_A Putative oxidoreductase 26.2 1.4E+02 0.0048 29.8 7.5 68 295-369 4-75 (336)
441 3gaf_A 7-alpha-hydroxysteroid 26.1 35 0.0012 32.8 2.9 31 2-38 13-43 (256)
442 1e8c_A UDP-N-acetylmuramoylala 26.1 70 0.0024 34.4 5.5 33 2-38 109-141 (498)
443 2if2_A Dephospho-COA kinase; a 26.0 40 0.0014 30.8 3.2 23 1-25 1-23 (204)
444 1y63_A LMAJ004144AAA protein; 25.9 42 0.0014 30.5 3.2 22 2-25 11-32 (184)
445 1qsg_A Enoyl-[acyl-carrier-pro 25.9 57 0.0019 31.3 4.4 33 2-39 10-43 (265)
446 1vi6_A 30S ribosomal protein S 25.9 3E+02 0.01 26.6 9.4 78 295-396 68-145 (208)
447 4dyv_A Short-chain dehydrogena 25.9 38 0.0013 33.1 3.1 32 2-39 29-60 (272)
448 1d7o_A Enoyl-[acyl-carrier pro 25.9 53 0.0018 32.2 4.2 35 2-41 9-44 (297)
449 2lpm_A Two-component response 25.7 1.1E+02 0.0038 26.6 5.8 75 294-393 7-83 (123)
450 1di6_A MOGA, molybdenum cofact 25.6 91 0.0031 29.6 5.6 32 360-391 66-97 (195)
451 3qvo_A NMRA family protein; st 25.6 55 0.0019 30.8 4.1 35 1-41 23-58 (236)
452 3u3x_A Oxidoreductase; structu 25.5 54 0.0019 33.5 4.3 89 295-392 26-142 (361)
453 1oaa_A Sepiapterin reductase; 25.3 43 0.0015 32.0 3.3 31 2-38 7-40 (259)
454 1dbq_A Purine repressor; trans 25.3 2E+02 0.0069 27.1 8.2 84 294-395 6-93 (289)
455 1a7j_A Phosphoribulokinase; tr 25.1 43 0.0015 33.5 3.4 41 2-44 6-46 (290)
456 1w6u_A 2,4-dienoyl-COA reducta 25.0 44 0.0015 32.5 3.4 30 2-37 27-56 (302)
457 4h08_A Putative hydrolase; GDS 24.9 60 0.0021 29.4 4.1 47 137-186 72-123 (200)
458 3rft_A Uronate dehydrogenase; 24.8 38 0.0013 32.7 2.8 35 1-41 3-37 (267)
459 2grj_A Dephospho-COA kinase; T 24.7 54 0.0018 30.7 3.8 26 3-34 14-40 (192)
460 2wyu_A Enoyl-[acyl carrier pro 24.5 57 0.0019 31.3 4.0 32 2-38 9-41 (261)
461 2f6r_A COA synthase, bifunctio 24.5 47 0.0016 32.8 3.5 34 1-42 75-108 (281)
462 3lkv_A Uncharacterized conserv 24.5 1.4E+02 0.0047 29.4 7.0 67 293-368 6-77 (302)
463 2ioy_A Periplasmic sugar-bindi 24.3 3E+02 0.01 25.9 9.3 33 359-395 56-88 (283)
464 3kvo_A Hydroxysteroid dehydrog 24.3 46 0.0016 34.1 3.5 32 2-39 46-77 (346)
465 3p94_A GDSL-like lipase; serin 24.2 47 0.0016 29.8 3.2 59 119-185 60-125 (204)
466 3r6d_A NAD-dependent epimerase 24.2 70 0.0024 29.5 4.5 34 1-40 5-39 (221)
467 1jtv_A 17 beta-hydroxysteroid 24.1 40 0.0014 34.0 2.9 30 2-37 3-32 (327)
468 3d7l_A LIN1944 protein; APC893 24.0 70 0.0024 29.0 4.4 33 1-41 4-36 (202)
469 3e48_A Putative nucleoside-dip 24.0 65 0.0022 31.0 4.4 34 1-41 1-35 (289)
470 2a6a_A Hypothetical protein TM 24.0 51 0.0017 31.9 3.5 45 358-403 64-110 (218)
471 4ag6_A VIRB4 ATPase, type IV s 23.9 75 0.0026 32.6 5.1 35 3-41 37-71 (392)
472 2rh8_A Anthocyanidin reductase 23.9 75 0.0026 31.2 4.9 34 2-41 10-43 (338)
473 3oig_A Enoyl-[acyl-carrier-pro 23.8 61 0.0021 31.0 4.1 31 2-37 8-39 (266)
474 2qt1_A Nicotinamide riboside k 23.8 39 0.0013 31.1 2.6 37 2-44 22-58 (207)
475 2r47_A Uncharacterized protein 23.8 17 0.00058 33.9 0.1 104 278-397 15-125 (157)
476 2qgz_A Helicase loader, putati 23.7 54 0.0019 32.9 3.8 61 2-64 153-223 (308)
477 3d3q_A TRNA delta(2)-isopenten 23.7 84 0.0029 32.6 5.3 44 2-52 8-54 (340)
478 2vfb_A Arylamine N-acetyltrans 23.5 88 0.003 31.3 5.3 53 22-74 76-133 (280)
479 1xx6_A Thymidine kinase; NESG, 23.4 79 0.0027 29.7 4.7 33 2-38 9-43 (191)
480 3evn_A Oxidoreductase, GFO/IDH 23.2 3.2E+02 0.011 27.1 9.5 69 294-369 4-76 (329)
481 2khz_A C-MYC-responsive protei 23.2 1.7E+02 0.0057 26.8 6.8 95 294-396 10-110 (165)
482 2x4g_A Nucleoside-diphosphate- 23.2 80 0.0027 30.9 5.0 33 3-41 15-47 (342)
483 2c29_D Dihydroflavonol 4-reduc 23.1 70 0.0024 31.5 4.5 34 2-41 6-39 (337)
484 2pk3_A GDP-6-deoxy-D-LYXO-4-he 23.0 78 0.0027 30.8 4.8 35 1-41 12-46 (321)
485 1yrb_A ATP(GTP)binding protein 22.9 95 0.0033 29.3 5.3 38 4-44 17-54 (262)
486 3h5o_A Transcriptional regulat 22.9 2.5E+02 0.0085 27.5 8.6 31 359-395 117-147 (339)
487 3hs3_A Ribose operon repressor 22.5 47 0.0016 31.8 3.0 26 359-395 66-91 (277)
488 1jjv_A Dephospho-COA kinase; P 22.3 67 0.0023 29.4 3.9 27 1-33 2-28 (206)
489 2ze6_A Isopentenyl transferase 22.3 1.1E+02 0.0039 29.4 5.8 45 1-52 1-48 (253)
490 3lkb_A Probable branched-chain 22.2 2E+02 0.0069 28.6 7.8 91 293-397 5-106 (392)
491 3gdg_A Probable NADP-dependent 22.2 58 0.002 31.1 3.6 31 2-37 21-52 (267)
492 1duv_G Octase-1, ornithine tra 21.9 3.9E+02 0.013 27.5 10.0 125 158-327 61-185 (333)
493 1w5r_A Arylamine N-acetyltrans 21.9 91 0.0031 31.2 5.1 52 22-73 79-135 (278)
494 2wtz_A UDP-N-acetylmuramoyl-L- 21.9 88 0.003 34.0 5.3 33 2-38 147-179 (535)
495 4ew6_A D-galactose-1-dehydroge 21.9 3E+02 0.01 27.6 9.0 63 294-369 24-90 (330)
496 4evq_A Putative ABC transporte 21.8 3.6E+02 0.012 26.3 9.5 90 294-396 15-113 (375)
497 3trf_A Shikimate kinase, SK; a 21.8 66 0.0022 28.8 3.7 25 1-27 5-29 (185)
498 2gk4_A Conserved hypothetical 21.8 61 0.0021 31.9 3.6 39 2-40 4-52 (232)
499 3h5t_A Transcriptional regulat 21.7 2.8E+02 0.0096 27.4 8.8 85 294-395 67-157 (366)
500 3ic5_A Putative saccharopine d 21.5 97 0.0033 25.0 4.4 34 1-41 5-39 (118)
No 1
>3nva_A CTP synthase; rossman fold, nucleotide binding, LIG; 2.50A {Sulfolobus solfataricus}
Probab=100.00 E-value=1e-198 Score=1609.50 Aligned_cols=527 Identities=48% Similarity=0.852 Sum_probs=508.9
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccccCCCCCCCccccceEEEccCCccccCCCCccccccCC
Q 007533 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFMDI 80 (599)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~dpyln~d~gtmsp~~hgevfv~~dg~e~dldlg~yerfl~~ 80 (599)
||||||||||+|||||||+|||||+|||+|||+||+||||||||||||||||||||||||||||+||||||||||||||+
T Consensus 3 ~k~i~vtggv~s~lgkgi~~as~g~ll~~~g~~v~~~k~dpylnvd~gtmsp~~hgevfv~~dg~e~dldlg~yerf~~~ 82 (535)
T 3nva_A 3 NKYIVVTGGVLSSVGKGTLVASIGMLLKRRGYNVTAVKIDPYINVDAGTMNPYMHGEVFVTEDGAETDLDLGHYERFMDV 82 (535)
T ss_dssp CEEEEEECCCSTTTTHHHHHHHHHHHHHHTTCCEEEEEEECSSSSSSTTCCHHHHCCCEECTTCCEECTHHHHHHHHHCC
T ss_pred ceEEEEeCccccCcchHHHHHHHHHHHHHCCceEEEEecCcceeecCCCCCccccceEEEecCCccccccccchhhhcCC
Confidence 69999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcccchHhhHHHHhhhhcCCCCCCeeEEcccchHHHHHHHHHHhcccCCCCCCCCcEEEEeeCccccccccchHH
Q 007533 81 KLTRDNNITTGKIYQSVIDKERKGDYLGKTVQVVPHITDEIQDWIERVAMIPVDGKEGPVDVCVIELGGTIGDIESMPFI 160 (599)
Q Consensus 81 ~l~~~~n~ttgkiy~~vi~ker~g~ylg~tvqviphit~~i~~~i~~~~~~p~d~~~~~~dv~i~e~ggtvgdies~pf~ 160 (599)
+|||+||+||||||++||+|||||||||||||||||||||||+||+++|+ ..+|||||||||||||||||+||+
T Consensus 83 ~l~~~~n~ttg~iy~~vi~ker~g~ylg~tvqviphit~eik~~i~~~~~------~~~~dv~i~eiggtvgdies~pf~ 156 (535)
T 3nva_A 83 NMTKYNNITAGKVYFEVIKKEREGKYLGQTVQIIPHVTDQIKDMIRYASK------INNAEITLVEIGGTVGDIESLPFL 156 (535)
T ss_dssp CCCGGGEEEHHHHHHHHHHHHHTTTTTTCCCCHHHHHHHHHHHHHHHHHH------HHTCSEEEEEECSCTTSGGGHHHH
T ss_pred CcccccCcchhHHHHHHHHHHhcCCcCCCeeEECCCchHHHHHHHHHhhc------cCCCCEEEEEeCCccchhcccHHH
Confidence 99999999999999999999999999999999999999999999999996 468999999999999999999999
Q ss_pred HHHHHhhhHcCCCCEEEEeeeeeeeecCCCccccCCchhhhhhhhcCCCcccEEEEecCCCCChhhhhccccCCCCCCCC
Q 007533 161 EALGQFSYRVGPGNFCLIHVSLVPVLNVVGEQKTKPTQHSVRGLRGQGLTPNILACRSTVALDDNVKGKLSQFCHVPEQN 240 (599)
Q Consensus 161 ea~rq~~~~~g~~n~~~ihv~~vp~~~~~~e~ktkptq~sv~~Lrs~Gi~pd~iv~R~~~~l~~~~~~Kislfc~v~~~~ 240 (599)
||+||||+++|++|+|||||||||||+++|||||||||||||+|||+|||||+|||||+.++++++|+||||||||++++
T Consensus 157 ea~rq~~~~~g~~n~~~ih~tlvp~~~~~ge~ktkptqhsv~~Lrs~GIqPdilvcRs~~~l~~~~r~KiaLfc~V~~~~ 236 (535)
T 3nva_A 157 EAVRQLKLEEGEDNVIFVHIALVEYLSVTGELKTKPLQHSVQELRRIGIQPDFIVGRATLPLDDETRRKIALFTNVKVDH 236 (535)
T ss_dssp HHHHHHHHHHCTTTEEEEEEEECCBCTTTSSBCCHHHHHHHHHHHHHTCCCSEEEEEESSCCCHHHHHHHHHHTTCCGGG
T ss_pred HHHHHHHHHhCCCCEEEEEeeccceecCCCcccCCchHHHHHHHHhCCCCCCEEEEecCCCCCHHHHHhhhhhcCCChhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeCCCCCccchhHHHH--HHHHHHHHHcCCCCCCCchhhHHHHHHHhhhc--CCCCceEEEEEeecCCCcchHHHHHH
Q 007533 241 IITLYDVPNIWHIPLLLR--KAHEAIFKVLNLQGTTKEPLLKEWTSRAEICD--GLHEPVRIAMVGKYTGLSDAYLSILK 316 (599)
Q Consensus 241 Vi~~~dv~tiy~vPl~L~--g~~~~i~~~l~l~~~~~~~~l~~W~~l~~~~~--~~~~~v~IaiVGkY~~l~DaY~SIi~ 316 (599)
||+++|+||||+||++|+ |+++.|+++|+|+ .+.++|.+|++++++++ ++.++++||+||||+++.|||.|+.+
T Consensus 237 VI~i~DvdtiY~vpl~L~~qGl~~~~~~~l~l~--~~~~~~~~w~~~~~~~~~~~~~~~v~IalVGKY~~l~DaY~Sv~e 314 (535)
T 3nva_A 237 IVSSYDVETSYEVPIILESQKLVSKILSRLKLE--DRQVDLTDWISFVNNIKGINSKKTINIALVGKYTKLKDSYISIKE 314 (535)
T ss_dssp EEEEECCSCGGGHHHHHHHHTHHHHHHHHTTCC--CCCCCCHHHHHHHHHHHTTTCCCEEEEEEEESCTTSGGGGHHHHH
T ss_pred eEecCCCChHHHhHHHHHHCCcHHHHHHHcCCC--CCCCCHHHHHHHHHHhhccCCCCeeEEEEEecCcCCchhHHHHHH
Confidence 999999999999999999 9999999999997 46779999999999999 88889999999999999999999999
Q ss_pred HHHHcCCcceeeeEEEEecCCCCCCccccCCchhhhHHHHhccCCCEEEeCCCCCCCchhHHHHHHHHHHHcCCCEEEEe
Q 007533 317 ALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGIC 396 (599)
Q Consensus 317 AL~haG~~~~v~v~i~wi~s~~le~~~~~~~p~~y~~a~~~L~~~DGIlVPGGfG~rg~eg~i~aik~are~~iP~LGIC 396 (599)
||+|+|+++.++|++.||+++++++++. ++|+.|.++|||++|||||+++.++++.++++|+++++|+||||
T Consensus 315 AL~hag~~~~~~V~I~wIds~~l~~~~~--------~~~~~L~~~DgIIlpGG~G~~~~~g~i~~ir~a~~~~~PiLGIC 386 (535)
T 3nva_A 315 AIYHASAYIGVRPKLIWIESTDLESDTK--------NLNEILGNVNGIIVLPGFGSRGAEGKIKAIKYAREHNIPFLGIC 386 (535)
T ss_dssp HHHHHHHHTTCEEEEEEEEGGGGCCSSS--------CCTTTTTSCSEEEECCCCSSTTHHHHHHHHHHHHHHTCCEEEET
T ss_pred HHHHHHHHcCCCeEEEEecchhcccccc--------chhhhccCCCEEEECCCCCCccHHHHHHHHHHHHHcCCcEEEEC
Confidence 9999999999999999999998876432 13578999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHhccccccccCCCccccCCCCCCCeeeeCCCCC-cCcCCCccccCceeeEEecCCchhhhccCCceeEEeee
Q 007533 397 LGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGS-KTHMGGTMRLGSRRTYFQIKDCKSAKLYGNRTFIDERH 475 (599)
Q Consensus 397 LGmQll~iefgr~Vlgl~dA~S~Ef~~~~~~~vi~~mpe~~-~~~~GgtmrLG~~~v~l~~~~s~l~~iyg~~~~I~erH 475 (599)
+|||+|+++||++++|++||+|+||++++++|+|.+||++. ..++|||||+|.|+|.+.++ |+++++|| +..|.+||
T Consensus 387 lG~Qll~va~Gg~v~g~qda~s~Ef~~~~~~pvI~~m~eq~~~~~~ggtmrlg~h~v~l~~g-S~L~~iyG-~~~I~erH 464 (535)
T 3nva_A 387 FGFQLSIVEFARDVLGLSEANSTEINPNTKDPVITLLDEQKNVTQLGGTMRLGAQKIILKEG-TIAYQLYG-KKVVYERH 464 (535)
T ss_dssp HHHHHHHHHHHHTTTCCTTCEETTTCTTCSCEEEECBCSSSCBCSSCCCCEEEEEEEEECTT-SHHHHHHT-SSEEEEEE
T ss_pred cchhHHHHHhhccccCccCCcccccCCCCCCCeeecchhcccccccCCccccCceEEEEcCC-CcHHHHhC-CCeeeecc
Confidence 99999999999999999999999999999999999999965 58899999999999999998 89999996 66789999
Q ss_pred eeeeeeCchhhhhhccCCeEEEEEeCCCCeEEEEEeCCCCeEEEEcccCCCcCCCCCchHHHHHHHHHHhc
Q 007533 476 RHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFLGLIAAACG 546 (599)
Q Consensus 476 rHrYeVnp~~v~~le~~Gl~~sa~s~dg~~vE~iE~~~hpffvGvQFHPE~ss~p~~p~pLF~~Fv~aa~~ 546 (599)
||||+||+.+.+.+++.||+++|+++||. +|++|+++||||+|||||||+.++|.+++|||.+|++||.+
T Consensus 465 rHryeVNs~h~q~l~~~GL~vsA~s~DG~-IEAIE~~~~pf~vGVQfHPE~~~~p~~~~~LF~~Fv~Aa~~ 534 (535)
T 3nva_A 465 RHRYEVNPKYVDILEDAGLVVSGISENGL-VEIIELPSNKFFVATQAHPEFKSRPTNPSPIYLGFIRAVAS 534 (535)
T ss_dssp EECCEECHHHHHHHHHTTCEEEEECTTCC-EEEEECTTSSCEEEESSCGGGGCCSSSCCHHHHHHHHHHTC
T ss_pred cccceechHHHhhcccCCeEEEEEeCCCC-EEEEEeCCCCcEEEEEeCCEecCCCCChhHHHHHHHHHHHh
Confidence 99999999999999899999999999995 99999999999999999999999998999999999999864
No 2
>1vco_A CTP synthetase; tetramer, riken structural genomics/proteomics initiative, RSGI, structural genomics, ligase; HET: GLN; 2.15A {Thermus thermophilus} SCOP: c.23.16.1 c.37.1.10 PDB: 1vcn_A 1vcm_A
Probab=100.00 E-value=2e-162 Score=1341.24 Aligned_cols=527 Identities=50% Similarity=0.863 Sum_probs=494.5
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccccCCCCCCCccccceEEEccCCccccCCCCccccccCC
Q 007533 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFMDI 80 (599)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~dpyln~d~gtmsp~~hgevfv~~dg~e~dldlg~yerfl~~ 80 (599)
||||||||||+||+|||+++||||+||+++||+|+++|+|||||||||||||+||||||||+||+|+||||||||||+++
T Consensus 12 ~~~i~v~gg~~s~~gk~~~~~~~~~~l~~~g~~v~~~k~~py~n~d~~~ms~~~hge~~vt~dg~e~~~~~g~~~~~~~~ 91 (550)
T 1vco_A 12 RKYVFITGGVVSSLGKGILTSSLGALLRARGYRVTAIKIDPYVNVDAGTMRPYEHGEVFVTADGAETDLDIGHYERFLDM 91 (550)
T ss_dssp CEEEEEEECSSSCSCHHHHHHHHHHHHHTTTCCEEEEEEECSSCSSGGGSCSSTTSCCEECTTCCEECTHHHHHHHHHTS
T ss_pred eeEEEEeCCcccCcchHHHHHHHHHHHHhCCceeeEeecccccccCccccCcccCCceEECCCCceehhhhccHHhcCCc
Confidence 59999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcccchHhhHHHHhhhhcCCCCCCeeEEcccchHHHHHHHHHHhcccCCCCCCCCcEEEEeeCccccccccchHH
Q 007533 81 KLTRDNNITTGKIYQSVIDKERKGDYLGKTVQVVPHITDEIQDWIERVAMIPVDGKEGPVDVCVIELGGTIGDIESMPFI 160 (599)
Q Consensus 81 ~l~~~~n~ttgkiy~~vi~ker~g~ylg~tvqviphit~~i~~~i~~~~~~p~d~~~~~~dv~i~e~ggtvgdies~pf~ 160 (599)
.|+++||+||||||++||+|||+|||||+||||+||||||||+||+++++ +.++||||||+||||||||||||+
T Consensus 92 ~l~~~~~~~~g~~~~~~~~~~~~~~y~~~~~~~~~~~~~~i~~~~~~~~~------~~~~d~~i~e~~gt~~di~~~~~~ 165 (550)
T 1vco_A 92 DLSRGNNLTTGQVYLSVIQKERRGEYLSQTVQVIPHITDEIKERIRKVAE------EQKAEIVVVEVGGTVGDIESLPFL 165 (550)
T ss_dssp CCCGGGEEEHHHHHHHHHHHHHTTTTTTCCCCTTTHHHHHHHHHHHHHHH------HTTCSEEEEEECSCTTSSTTHHHH
T ss_pred ccCCCCCeeccEEchhhhhhhcccccccCceEEhhHHHHHHHHHHHHHhc------ccCCCEEEEECCCChhHhhhHHHH
Confidence 99999999999999999999999999999999999999999999999985 457999999999999999999999
Q ss_pred HHHHHhhhHcCCCCEEEEeeeeeeeecCCCccccCCchhhhhhhhcCCCcccEEEEecCCCCChhhhhccccCCCCCCCC
Q 007533 161 EALGQFSYRVGPGNFCLIHVSLVPVLNVVGEQKTKPTQHSVRGLRGQGLTPNILACRSTVALDDNVKGKLSQFCHVPEQN 240 (599)
Q Consensus 161 ea~rq~~~~~g~~n~~~ihv~~vp~~~~~~e~ktkptq~sv~~Lrs~Gi~pd~iv~R~~~~l~~~~~~Kislfc~v~~~~ 240 (599)
||+|||++++|++|+|||||||||||+++||+|||||||||++|||+||+||+||||++.++++++|+|+||||||++++
T Consensus 166 ~~~rq~~~~~~~~~~~~~h~~~~p~~~~~~e~ktkptq~sv~~lrs~gi~pd~lvvR~~~~~~~~~r~k~sL~~~v~~~~ 245 (550)
T 1vco_A 166 EAIRQFRFDEGEGNTLYLHLTLVPYLETSEEFKTKPTQHSVATLRGVGIQPDILVLRSARPVPEEVRRKVALFTNVRPGH 245 (550)
T ss_dssp HHHHTHHHHHCTTSEEEEEEEECCEETTTTEECCHHHHHHHHHHHHTTCCCSEEEEEESSCCCHHHHHHHHHHHTCCGGG
T ss_pred HHHHHHhHhhCcCCEEEEEEeCeecccCCCCcCCCCcchhHHHHhcCCCccCEEEEeCCCCCCcchhcccchhcCCCccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeCCCCCccchhHHHH--HHHHHHHHHcCCCCCCCchhhHHHHHHHhhhcCCCCceEEEEEeecCCCcchHHHHHHHH
Q 007533 241 IITLYDVPNIWHIPLLLR--KAHEAIFKVLNLQGTTKEPLLKEWTSRAEICDGLHEPVRIAMVGKYTGLSDAYLSILKAL 318 (599)
Q Consensus 241 Vi~~~dv~tiy~vPl~L~--g~~~~i~~~l~l~~~~~~~~l~~W~~l~~~~~~~~~~v~IaiVGkY~~l~DaY~SIi~AL 318 (599)
|++++|+||||+||++|+ |+++.++++|+|+ ...+++..|.+++.++.++..+++|+++|||..+.|+|.|+.++|
T Consensus 246 Vi~~~dvdt~y~lp~~lr~~G~~~~v~~~~~l~--~~~~~l~~w~~~~~~~~~~~~~v~I~ivgkyv~l~D~y~Sv~~aL 323 (550)
T 1vco_A 246 VFSSPTVEHLYEVPLLLEEQGLGRAVERALGLE--AVIPNLSFWQEAVRVLKHPERTVKIAIAGKYVKMPDAYLSLLEAL 323 (550)
T ss_dssp EEEEECCSCTTHHHHHHHHHTHHHHHHHHTTCC--CCCCCCHHHHHHHHHHHSCSEEEEEEEEESCC---CTTHHHHHHH
T ss_pred eeecCCCChHHHHHHHHHHcCChhhhHhhCCCC--chhHHHHHhHHHHHhhcCCCCceEEcccCCeEEEEecHHHHHHHH
Confidence 999999999999999999 9999999999997 356688899999999999888999999999999999999999999
Q ss_pred HHcCCcceeeeEEEEecCCCCCCccccCCchhhhHHHHhccCCCEEEeCCCCCCCchhHHHHHHHHHHHcCCCEEEEehh
Q 007533 319 LHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGICLG 398 (599)
Q Consensus 319 ~haG~~~~v~v~i~wi~s~~le~~~~~~~p~~y~~a~~~L~~~DGIlVPGGfG~rg~eg~i~aik~are~~iP~LGICLG 398 (599)
.|++.+..+++.+.|+++++++++. +++.+.++||||||||||+++.++++.++++|+++++|+||||||
T Consensus 324 ~~~g~~~g~~v~I~~~d~~~~~~~~----------~~~~L~~~DGIILpGGfGd~~~~g~i~~ir~a~e~~iPiLGICLG 393 (550)
T 1vco_A 324 RHAGIKNRARVEVKWVDAESLEAAD----------LEEAFRDVSGILVPGGFGVRGIEGKVRAAQYARERKIPYLGICLG 393 (550)
T ss_dssp HHHHHHTTEEEEEEEEEGGGC--CC----------HHHHTTTCSCEEECCCCSSTTHHHHHHHHHHHHHTTCCEEEETHH
T ss_pred HHHHHHcCCeEEEEEeCccccccch----------HHHHHhcCCEEEECCCCCCcchhhhHHHHHHHHHCCCcEEEECcC
Confidence 9999998899999999987765322 346688999999999999999999999999999999999999999
Q ss_pred HHHHHHHhccccccccCCCccccCCCCCCCeeeeCCCC-CcCcCCCccccCceeeEEecCCchhhhccCCceeEEeeeee
Q 007533 399 MQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEG-SKTHMGGTMRLGSRRTYFQIKDCKSAKLYGNRTFIDERHRH 477 (599)
Q Consensus 399 mQll~iefgr~Vlgl~dA~S~Ef~~~~~~~vi~~mpe~-~~~~~GgtmrLG~~~v~l~~~~s~l~~iyg~~~~I~erHrH 477 (599)
||+|++++|+++.++++++|+||++.+.+|++.+|+++ ..+++|++||+|.++|.+.++ +++..+|+ ...+.++|+|
T Consensus 394 mQlL~~a~Gg~v~~l~~~~s~E~~~~~~hpvi~~~~~q~~i~~~ggtmrlG~~~v~i~~~-s~l~~iy~-~~~v~e~h~H 471 (550)
T 1vco_A 394 LQIAVIEFARNVAGLKGANSTEFDPHTPHPVIDLMPEQLEVEGLGGTMRLGDWPMRIKPG-TLLHRLYG-KEEVLERHRH 471 (550)
T ss_dssp HHHHHHHHHHHTSCCTTCEETTTCTTCSCEEEEESCGGGCC---CCCCEEEEEEEEECTT-SHHHHHHC-CSEEEEEEEE
T ss_pred HHHHHHHhCcccccCCccccccccCCCCCCeEEeccccccccccCCcccccceEEEEccC-chhhHhcC-Cceeeeeccc
Confidence 99999999999999999999999999999999999874 578999999999999999887 89999996 5677899999
Q ss_pred eeeeCchhhhhhccCCeEEEEEeCCC-----CeEEEEEeCCCCeEEEEcccCCCcCCCCCchHHHHHHHHHHhcc
Q 007533 478 RYEVNPDMIARLENAGLSFTGKDETS-----QRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFLGLIAAACGQ 547 (599)
Q Consensus 478 rYeVnp~~v~~le~~Gl~~sa~s~dg-----~~vE~iE~~~hpffvGvQFHPE~ss~p~~p~pLF~~Fv~aa~~~ 547 (599)
+|+||+.+.+.+++.|+.++|++++| ..+|++|+++||||+|||||||++++|.++++||.+|+++|.++
T Consensus 472 ~Y~Vns~~~~~l~~~gl~v~a~s~dG~g~~~~~VeaIe~~~~p~fvGVQFHPE~~~~p~~g~~LF~~Fv~aa~~~ 546 (550)
T 1vco_A 472 RYEVNPLYVDGLERAGLVVSATTPGMRGRGAGLVEAIELKDHPFFLGLQSHPEFKSRPMRPSPPFVGFVEAALAY 546 (550)
T ss_dssp SEEECHHHHHHHHHHTEEEEEECCCBTTBSTTCEEEEEETTSSSEEEESSCGGGGCBTTBCCHHHHHHHHHHHHH
T ss_pred eEEEchHHhhccccCCeEEEEEeCCCCccCCCcEEEEEeCCCCEEEEEEeCCccCCCCCChHHHHHHHHHHHHhh
Confidence 99999999888855899999999984 36999999999999999999999999998999999999998754
No 3
>1s1m_A CTP synthase; CTP synthetase, UTP:ammonia ligase (ADP-forming), cytidine 5 triphosphate synthase, ammonia lyase; 2.30A {Escherichia coli} SCOP: c.23.16.1 c.37.1.10 PDB: 2ad5_A*
Probab=100.00 E-value=3.3e-160 Score=1322.29 Aligned_cols=525 Identities=49% Similarity=0.836 Sum_probs=492.5
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccccCCCCCCCccccceEEEccCCccccCCCCccccccCC
Q 007533 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFMDI 80 (599)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~dpyln~d~gtmsp~~hgevfv~~dg~e~dldlg~yerfl~~ 80 (599)
||||||||||+||+|||+++||||+||+++||+|+.+|+|||||||||||||+||||||||+||+|+||||||||||+|+
T Consensus 3 ~~~i~v~gg~~s~~gk~~~~~~l~~~l~~~g~~v~~~k~~py~n~d~~~ms~~~hge~~vt~dg~e~~~~~~~~~~~~~~ 82 (545)
T 1s1m_A 3 TNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPYINVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFIRT 82 (545)
T ss_dssp CEEEEEEECSSSCSCHHHHHHHHHHHHHTTTCCEEEEEEECCSCSCGGGSCTTTSCCCEECTTSCEECTHHHHHHHHCSS
T ss_pred ceEEEEeCCcccCcchHHHHHHHHHHHHhCCceeeeeeccccccCCCCccCcccCCCeEECCCCCeehhhhccceeeece
Confidence 69999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcccchHhhHHHHhhhhcCCCCCCeeEEcccchHHHHHHHHHHhcccCCCCCCCCcEEEEeeCccccccccchHH
Q 007533 81 KLTRDNNITTGKIYQSVIDKERKGDYLGKTVQVVPHITDEIQDWIERVAMIPVDGKEGPVDVCVIELGGTIGDIESMPFI 160 (599)
Q Consensus 81 ~l~~~~n~ttgkiy~~vi~ker~g~ylg~tvqviphit~~i~~~i~~~~~~p~d~~~~~~dv~i~e~ggtvgdies~pf~ 160 (599)
.|+++||+||||||++||+|||+|||+|+|||++||||||||+||+++++ ++||||||+||||||||||||+
T Consensus 83 ~l~~~~~~~~g~~~~~~~~~~~~~~y~~~~~~~~~~~~~~i~~~~~~~~~--------~~d~~i~e~~gt~~di~~~~~~ 154 (545)
T 1s1m_A 83 KMSRRNNFTTGRIYSDVLRKERRGDYLGATVQVIPHITNAIKERVLEGGE--------GHDVVLVEIGGTVGDIESLPFL 154 (545)
T ss_dssp CCCGGGEEEHHHHHHHHHHHHHTTTTTTCCCCHHHHHHHHHHHHHHHHHT--------TCSEEEEEECSCTTSSTTHHHH
T ss_pred eecCCCCeeccEEeeehhhhccccccccCceeehhHHHHHHHHHHHHHhc--------cCCEEEEECCCChhhhhChHHH
Confidence 99999999999999999999999999999999999999999999999984 7899999999999999999999
Q ss_pred HHHHHhhhHcCCCCEEEEeeeeeeeecCCCccccCCchhhhhhhhcCCCcccEEEEecCCCCChhhhhccccCCCCCCCC
Q 007533 161 EALGQFSYRVGPGNFCLIHVSLVPVLNVVGEQKTKPTQHSVRGLRGQGLTPNILACRSTVALDDNVKGKLSQFCHVPEQN 240 (599)
Q Consensus 161 ea~rq~~~~~g~~n~~~ihv~~vp~~~~~~e~ktkptq~sv~~Lrs~Gi~pd~iv~R~~~~l~~~~~~Kislfc~v~~~~ 240 (599)
||+|||++++|++|+|||||||||||+++||+|||||||||++|||+|||||+|||||+.++++++|+|+||||||++++
T Consensus 155 ~~~~q~~~~~~~~~~~~~h~~~~p~~~~~ge~ktkptq~sv~~l~s~gi~pd~lv~R~~~~~~~~~r~kisL~~~v~~~~ 234 (545)
T 1s1m_A 155 EAIRQMAVEIGREHTLFMHLTLVPYMAASGEVKTKPTQHSVKELLSIGIQPDILICRSDRAVPANERAKIALFCNVPEKA 234 (545)
T ss_dssp HHHHHHHHHHCTTSEEEEEEEECCEETTTTEECCHHHHHHHHHHHTTTCCCSEEEEEESSCCCHHHHHHHHHTTCCCSSC
T ss_pred HHHHHHhHhhCcCcEEEEEEeCcccccCCCCcCCCCCcCCHHHHhCCCCccCEEEEeCCCCCCchhhccCChhhCccccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeCCCCCccchhHHHH--HHHHHHHHHcCCCCCCCchhhHHHHHHHhhhcCCCCceEEEEEeecCCCcchHHHHHHHH
Q 007533 241 IITLYDVPNIWHIPLLLR--KAHEAIFKVLNLQGTTKEPLLKEWTSRAEICDGLHEPVRIAMVGKYTGLSDAYLSILKAL 318 (599)
Q Consensus 241 Vi~~~dv~tiy~vPl~L~--g~~~~i~~~l~l~~~~~~~~l~~W~~l~~~~~~~~~~v~IaiVGkY~~l~DaY~SIi~AL 318 (599)
||+++|+||||+||++|| |++++++++|+++ ...+++.+|.+++++++++...++||++|||..+.|+|.|+.++|
T Consensus 235 Vi~~~dvdt~y~lp~~lr~~G~~~~ii~~~~l~--~~~~~l~~w~~lv~~v~~~~~~v~i~~vGkyv~l~D~y~Si~~aL 312 (545)
T 1s1m_A 235 VISLKDVDSIYKIPGLLKSQGLDDYICKRFSLN--CPEANLSEWEQVIFEEANPVSEVTIGMVGKYIELPDAYKSVIEAL 312 (545)
T ss_dssp EEEEECCSCGGGHHHHHHHTTHHHHHHHHTTCC--CCCCCCHHHHHHHHHHHCCSEEEEEEEEESSCSSGGGGHHHHHHH
T ss_pred ceecCCCChHHHHHHHHHHcCChhhhhhhCCCC--chhHHHHHHHHHHHhccCCCCeEEeCCcCCeEEEEEHHHHHHHHH
Confidence 999999999999999999 9999999999996 355688999999999999988999999999999999999999999
Q ss_pred HHcCCcceeeeEEEEecCCCCCCccccCCchhhhHHHHhccCCCEEEeCCCCCCCchhHHHHHHHHHHHcCCCEEEEehh
Q 007533 319 LHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGICLG 398 (599)
Q Consensus 319 ~haG~~~~v~v~i~wi~s~~le~~~~~~~p~~y~~a~~~L~~~DGIlVPGGfG~rg~eg~i~aik~are~~iP~LGICLG 398 (599)
+++|+++.+++.+.|+++++++++ +++.+.++||||||||||+++.++++.++++++++++|+||||||
T Consensus 313 ~~~G~~~~~~V~i~~~d~e~i~~~-----------~~~~l~~~DGIilsGGpg~~~~~g~~~~i~~a~~~~~PiLGIClG 381 (545)
T 1s1m_A 313 KHGGLKNRVSVNIKLIDSQDVETR-----------GVEILKGLDAILVPGGFGYRGVEGMITTARFARENNIPYLGICLG 381 (545)
T ss_dssp HHHHHHHTEEEEEEEEEHHHHHHH-----------CTTTTTTCSEEEECCCCSSTTHHHHHHHHHHHHHTTCCEEEETHH
T ss_pred HHhCcccCCeEEEccCCHHHhhhh-----------hhhhhhcCCEEEECCCCCCccchhhHHHHHHHHHCCCcEEEECCh
Confidence 999999888899999987655311 123578999999999999999999999999999999999999999
Q ss_pred HHHHHHHhccccccccCCCccccCCCCCCCeeeeC----------CCC-CcCcCCCccccCceeeEEecCCchhhhccCC
Q 007533 399 MQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFM----------PEG-SKTHMGGTMRLGSRRTYFQIKDCKSAKLYGN 467 (599)
Q Consensus 399 mQll~iefgr~Vlgl~dA~S~Ef~~~~~~~vi~~m----------pe~-~~~~~GgtmrLG~~~v~l~~~~s~l~~iyg~ 467 (599)
||+|+++||++++++++++|+||++.+.+|++.+| +++ ...++|+|||+|.+++.+.++ +++.++|+
T Consensus 382 ~Qll~va~Gg~v~~l~~a~s~E~~~~~~hpvi~l~~~w~~~~g~~~~q~~~~~~ggtmrlG~~~v~l~~~-s~l~~iyg- 459 (545)
T 1s1m_A 382 MQVALIDYARHVANMENANSTEFVPDCKYPVVALITEWRDENGNVEVRSEKSDLGGTMRLGAQQCQLVDD-SLVRQLYN- 459 (545)
T ss_dssp HHHHHHHHHHHHHCCTTCEETTTCSSCSCEEEECTTTCCCTTSCCC----------CCEEEEEEEEECTT-CHHHHHTT-
T ss_pred HHHHHHHhCCceecCCCCcccccCCCCCCceEEeecccccccccccccccccccCccccccceeeEeccC-CHHHHhcC-
Confidence 99999999999999999999999999999999998 442 346789999999999999887 89999996
Q ss_pred ceeEEeeeeeeeeeCchhhhhhccCCeEEEEEeCCCCeEEEEEeCCCCeEEEEcccCCCcCCCCCchHHHHHHHHHHhcc
Q 007533 468 RTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFLGLIAAACGQ 547 (599)
Q Consensus 468 ~~~I~erHrHrYeVnp~~v~~le~~Gl~~sa~s~dg~~vE~iE~~~hpffvGvQFHPE~ss~p~~p~pLF~~Fv~aa~~~ 547 (599)
...+.+||+|||+||+.+.+.+++.|++++|+++||..+|++|+++||||+|||||||+.++|.++++||.+|+++|.++
T Consensus 460 ~~~v~e~h~Hry~VNs~~~~~l~~~gl~v~a~s~dg~~VEaie~~~~p~flGVQFHPE~~~~p~~g~~LF~~Fv~aa~~~ 539 (545)
T 1s1m_A 460 APTIVERHRHRYEVNNMLLKQIEDAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAASEF 539 (545)
T ss_dssp SSEEEEEEEECCEECHHHHHHHHHTTCEEEEECSSSCCEEEEECTTSSSEEEESSCGGGTCCTTTCCHHHHHHHHHHHHH
T ss_pred CceEEEecCcceEEChHHhhhcccCCeEEEEECCCCCceEEEEeCCCCEEEEEeCCCCCCCCCCChHHHHHHHHHHHHHH
Confidence 56788999999999999999887799999999999966999999999999999999999999999999999999999764
Q ss_pred h
Q 007533 548 L 548 (599)
Q Consensus 548 ~ 548 (599)
.
T Consensus 540 ~ 540 (545)
T 1s1m_A 540 Q 540 (545)
T ss_dssp H
T ss_pred H
Confidence 3
No 4
>2c5m_A CTP synthase; cytidine 5-prime triphosphate synthetase, CTP synthetase, UTP, glutamine, amidotransferase, ligase, phosphorylation; 2.80A {Homo sapiens} PDB: 2vo1_A 3ihl_A*
Probab=100.00 E-value=1.6e-144 Score=1077.64 Aligned_cols=270 Identities=67% Similarity=1.120 Sum_probs=227.7
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccccCCCCCCCccccceEEEccCCccccCCCCccccccCC
Q 007533 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFMDI 80 (599)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~dpyln~d~gtmsp~~hgevfv~~dg~e~dldlg~yerfl~~ 80 (599)
||||||||||+|||||||+|||||+|||+|||+||+||||||||+|||||||||||||||||||+||||||||||||||+
T Consensus 23 mKyIfVTGGVvSglGKGi~aaSlG~LLk~rG~~Vt~~KiDPYlNvD~GTMsP~qHGEVfVtdDG~EtDLDLGhYERFl~~ 102 (294)
T 2c5m_A 23 MKYILVTGGVISGIGKGIIASSVGTILKSCGLHVTSIKIDPYINIDAGTFSPYEHGEVFVLDDGGEVDLDLGNYERFLDI 102 (294)
T ss_dssp CEEEEEEECSSTTSCHHHHHHHHHHHHHTTTCCEECCEEECBCCCCC---------------------------------
T ss_pred eEEEEEcCccccccchHHHHHHHHHHHHHCCCeeEEEecCCceeecCCCCCccccceEEEecCCccccccccchhhhcCC
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcccchHhhHHHHhhhhcCCCCCCeeEEcccchHHHHHHHHHHhcccCCCCCCCCcEEEEeeCccccccccchHH
Q 007533 81 KLTRDNNITTGKIYQSVIDKERKGDYLGKTVQVVPHITDEIQDWIERVAMIPVDGKEGPVDVCVIELGGTIGDIESMPFI 160 (599)
Q Consensus 81 ~l~~~~n~ttgkiy~~vi~ker~g~ylg~tvqviphit~~i~~~i~~~~~~p~d~~~~~~dv~i~e~ggtvgdies~pf~ 160 (599)
+|||+||+||||||++||+|||||||||||||||||||||||+||+++|++|||+++.+|||||||||||||||||+||+
T Consensus 103 ~lt~~nNiTtGkIY~~VI~KERrGdYLGkTVQVIPHiTdeIk~~I~~~a~~pvd~~~~~~Dv~IiEiGGTVGDIES~PFl 182 (294)
T 2c5m_A 103 RLTKDNNLTTGKIYQYVINKERKGDYLGKTVQVVPHITDAIQEWVMRQALIPVDEDGLEPQVCVIELGGTVGDIESMPFI 182 (294)
T ss_dssp --CCTTEEEHHHHHHHHHHHHHTSCSCSSCCCTTTHHHHHHHHHHHHHTTCC------CCSEEEEEECSCTTCSTTHHHH
T ss_pred CCcccccccHHHHHHHHHHHHhcCCcCCceeEEcCCchHHHHHHHHHHhcCCccccCCCCCEEEEEeCCcchhhcccHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhHcCCCCEEEEeeeeeeeecCCCccccCCchhhhhhhhcCCCcccEEEEecCCCCChhhhhccccCCCCCCCC
Q 007533 161 EALGQFSYRVGPGNFCLIHVSLVPVLNVVGEQKTKPTQHSVRGLRGQGLTPNILACRSTVALDDNVKGKLSQFCHVPEQN 240 (599)
Q Consensus 161 ea~rq~~~~~g~~n~~~ihv~~vp~~~~~~e~ktkptq~sv~~Lrs~Gi~pd~iv~R~~~~l~~~~~~Kislfc~v~~~~ 240 (599)
||+||||+++|++|+||||||||||++++|||||||||||||+|||+|||||+|+|||+++|++++|+|||+||+|++++
T Consensus 183 EAiRQ~~~~~g~~n~~~iHvtlVP~i~~~gE~KTKPTQhSVk~Lr~~Gi~PDiivcRse~~l~~~~k~KIalfc~V~~~~ 262 (294)
T 2c5m_A 183 EAFRQFQFKVKRENFCNIHVSLVPQPSSTGEQKTKPTQNSVRELRGLGLSPDLVVCRCSNPLDTSVKEKISMFCHVEPEQ 262 (294)
T ss_dssp HHHHTTTTTSCTTTEEEEEEEECCCCTTTCSCCCHHHHHHHHHHHHTTCCCSEEEEECSSCCCTTHHHHHHHTTTCCCSC
T ss_pred HHHHHHHHHhCCCCEEEEEeeccceecCCCcccCCCcHHHHHHHHHcCCCCCEEEEecCCCCCHHHHHHHHHhcCCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeCCCCCccchhHHHH--HHHHHHHHHcCC
Q 007533 241 IITLYDVPNIWHIPLLLR--KAHEAIFKVLNL 270 (599)
Q Consensus 241 Vi~~~dv~tiy~vPl~L~--g~~~~i~~~l~l 270 (599)
||+++|+++||+||++|+ |+++.++++|+|
T Consensus 263 Vi~~~D~~~IY~VPl~l~~qgl~~~i~~~L~l 294 (294)
T 2c5m_A 263 VICVHDVSSIYRVPLLLEEQGVVDYFLRRLDL 294 (294)
T ss_dssp CEECCCCSCGGGHHHHHHTTTHHHHHHHHTTC
T ss_pred EEecCCcchHHHhhHHHHHCChHHHHHHHhCc
Confidence 999999999999999999 999999999986
No 5
>2vo1_A CTP synthase 1; pyrimidine biosynthesis, glutamine amidotransferase, phosphorylation, amidotransferase, cytidine 5-prime triphos synthetase, UTP; 2.8A {Homo sapiens} SCOP: c.37.1.10 PDB: 3ihl_A*
Probab=100.00 E-value=3e-142 Score=1069.57 Aligned_cols=271 Identities=66% Similarity=1.116 Sum_probs=229.5
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccccCCCCCCCccccceEEEccCCccccCCCCccccccCC
Q 007533 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFMDI 80 (599)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~dpyln~d~gtmsp~~hgevfv~~dg~e~dldlg~yerfl~~ 80 (599)
||||||||||+|||||||+|||||+|||+|||+|+++|+|||||+|||||||||||||||||||+||||||||||||||+
T Consensus 23 ~KyIfVTGGVvS~lGKGi~aaSlg~lLk~~G~~Vt~~K~DPYlNvD~GTMsP~qHGEVfVtdDG~EtDLDLGhYERFl~~ 102 (295)
T 2vo1_A 23 MKYILVTGGVISGIGKGIIASSVGTILKSCGLHVTSIKIDPYINIDAGTFSPYEHGEVFVLDDGGEVDLDLGNYERFLDI 102 (295)
T ss_dssp CEEEEEEECSSSSSSHHHHHHHHHHHHHHTTCCEEEEEEECSSCCC----------------------------------
T ss_pred ceEEEEcCCcccccccHHHHHHHHHHHHHCCCcceeeecccceecCCCCCChhhhceEEeecccccccccccchHhhccC
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcccchHhhHHHHhhhhcCCCCCCeeEEcccchHHHHHHHHHHhcccCCCCCCCCcEEEEeeCccccccccchHH
Q 007533 81 KLTRDNNITTGKIYQSVIDKERKGDYLGKTVQVVPHITDEIQDWIERVAMIPVDGKEGPVDVCVIELGGTIGDIESMPFI 160 (599)
Q Consensus 81 ~l~~~~n~ttgkiy~~vi~ker~g~ylg~tvqviphit~~i~~~i~~~~~~p~d~~~~~~dv~i~e~ggtvgdies~pf~ 160 (599)
+|+|+||+||||||++||+|||||||||||||||||||||||+||+++|.+|+|+++.+|||||||||||||||||+||+
T Consensus 103 ~l~~~~niTtGkiY~~Vi~kERrGdYLG~TVQvIPHiTdeIk~~I~~~a~~~~~~~~~~~Dv~IvEiGGTVGDIEs~PFl 182 (295)
T 2vo1_A 103 RLTKDNNLTTGKIYQYVINKERKGDYLGKTVQVVPHITDAIQEWVMRQALIPVDEDGLEPQVCVIELGGTVGDIESMPFI 182 (295)
T ss_dssp -----CEEEHHHHHHHHHHHHHTTTTTTCCCCHHHHHHHHHHHHHHHHHHSCCSSSCCCCSEEEEEECSCTTCGGGHHHH
T ss_pred CcCccccccHHHHHHHHHHHHHcCCCCCCeEEecCChhhHHHHHHHHhhcccccccCCCCCEEEEEcCceeccccccHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhHcCCCCEEEEeeeeeeeecCCCccccCCchhhhhhhhcCCCcccEEEEecCCCCChhhhhccccCCCCCCCC
Q 007533 161 EALGQFSYRVGPGNFCLIHVSLVPVLNVVGEQKTKPTQHSVRGLRGQGLTPNILACRSTVALDDNVKGKLSQFCHVPEQN 240 (599)
Q Consensus 161 ea~rq~~~~~g~~n~~~ihv~~vp~~~~~~e~ktkptq~sv~~Lrs~Gi~pd~iv~R~~~~l~~~~~~Kislfc~v~~~~ 240 (599)
||+||||+++|++|+||||||||||++++||+||||||||||+|||+|||||+|+|||+++|+++.|+|||+||+|++++
T Consensus 183 EAiRQ~~~~~g~~n~~~iHvtlvP~l~~~gE~KTKPTQhSVkeLr~~GIqPDiivcRse~pl~~~~k~KIAlFCnV~~~~ 262 (295)
T 2vo1_A 183 EAFRQFQFKVKRENFCNIHVSLVPQPSSTGEQKTKPTQNSVRELRGLGLSPDLVVCRCSNPLDTSVKEKISMFCHVEPEQ 262 (295)
T ss_dssp HHHHHHHHHSCGGGEEEEEEEECCCCCC-CCCCCHHHHHHHHHHHHHTCCCSEEEEECSSCCCHHHHHHHHHHTTSCGGG
T ss_pred HHHHHHHHhhcccceeEEEeeccccccccccccccchHhHHHHHHhcCCCCCeeeecCCCCCCHHHHHHHHHccCCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeCCCCCccchhHHHH--HHHHHHHHHcCCC
Q 007533 241 IITLYDVPNIWHIPLLLR--KAHEAIFKVLNLQ 271 (599)
Q Consensus 241 Vi~~~dv~tiy~vPl~L~--g~~~~i~~~l~l~ 271 (599)
||+++|++|||+||++|+ |+++.|+++|+|+
T Consensus 263 VI~~~Dv~sIYeVPl~L~~qgl~~~i~~~L~LP 295 (295)
T 2vo1_A 263 VICVHDVSSIYRVPLLLEEQGVVDYFLRRLDLP 295 (295)
T ss_dssp EEEECCCSSGGGHHHHHHHTTHHHHHHHHHTCC
T ss_pred EEEcCCcCcHHHHHHHHHHCCchHHHHHHcCCC
Confidence 999999999999999999 9999999999985
No 6
>2v4u_A CTP synthase 2; pyrimidine biosynthesis, glutamine amidotransferase, glutaminase domain, 5-OXO-L-norleucine, DON, ligase, phosphoprotein; HET: CYD; 2.3A {Homo sapiens} PDB: 2vkt_A
Probab=100.00 E-value=5.2e-49 Score=405.92 Aligned_cols=276 Identities=53% Similarity=0.870 Sum_probs=235.3
Q ss_pred HHHHHHhhhcCCCCceEEEEEeecCCCcchHHHHHHHHHHcCCcceeeeEEEEecCCCCCCccccCCchhhhHHHHhccC
Q 007533 281 EWTSRAEICDGLHEPVRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKG 360 (599)
Q Consensus 281 ~W~~l~~~~~~~~~~v~IaiVGkY~~l~DaY~SIi~AL~haG~~~~v~v~i~wi~s~~le~~~~~~~p~~y~~a~~~L~~ 360 (599)
-|+.+++++.++..+++|||+|||...+++|.|+.++|+++|+++..++.+.|+++++++......+++.|+++|+.+.+
T Consensus 11 ~~~~~~~~~~~~~~~~~Iavv~d~~~~~~s~~si~~~L~~~G~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 90 (289)
T 2v4u_A 11 VDLGTENLYFQSMKICSIALVGKYTKLRDCYASVFKALEHSALAINHKLNLMYIDSIDLEKITETEDPVKFHEAWQKLCK 90 (289)
T ss_dssp ------------CEEEEEEEEESCSSCCGGGHHHHHHHHHHHHHTTEEEEEEEEEGGGGSHHHHHHCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhCcCCceEEEEEecCcCCCccHHHHHHHHHHhhhhhCCceEEEEechhhcccccccCChhhhhhHHHHHhh
Confidence 59999999999988899999999987888999999999999999888899999998876543333356678888888999
Q ss_pred CCEEEeCCCCCCCchhHHHHHHHHHHHcCCCEEEEehhHHHHHHHhccccccccCCCccccCCCCCCCeeeeCCCCCcCc
Q 007533 361 ADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTH 440 (599)
Q Consensus 361 ~DGIlVPGGfG~rg~eg~i~aik~are~~iP~LGICLGmQll~iefgr~Vlgl~dA~S~Ef~~~~~~~vi~~mpe~~~~~ 440 (599)
+||||||||||++...+.+.++++++++++|+||||+|||+|+.++|+++.|++++++.|+++++++|++.+||+.....
T Consensus 91 ~dgiil~GG~~~~~~~~~~~~i~~~~~~~~PilGIC~G~Q~l~~a~Gg~v~~~~~~~~~e~~~~~~~~~i~~~~~h~~~~ 170 (289)
T 2v4u_A 91 ADGILVPGGFGIRGTLGKLQAISWARTKKIPFLGVXLGMQLAVIEFARNCLNLKDADSTEFRPNAPVPLVIDMPEHNPGN 170 (289)
T ss_dssp CSEEEECSCCSSTTHHHHHHHHHHHHHTTCCEEEETHHHHHHHHHHHHHHSCCTTEEESTTCTTCSEEEEEECCBCCTTC
T ss_pred CCEEEecCCCCchhHHHHHHHHHHHHHcCCcEEEECccHHHHHHHHhccccccccCcccccCccccccceecchhhcccc
Confidence 99999999999988889999999999999999999999999999999999999999999999888899999999765556
Q ss_pred CCCccccCceeeEEe-cCCchhhhccCCceeEEeeeeeeeeeCchhhhhhccCCeEEEEEeCCCCeEEEEEeCCCCeEEE
Q 007533 441 MGGTMRLGSRRTYFQ-IKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIG 519 (599)
Q Consensus 441 ~GgtmrLG~~~v~l~-~~~s~l~~iyg~~~~I~erHrHrYeVnp~~v~~le~~Gl~~sa~s~dg~~vE~iE~~~hpffvG 519 (599)
+|++|++|.+++.+. ++ +.+.++|+....++++|+|+|+||++++..+...|++++|+++||.++|++|++++||++|
T Consensus 171 ~~~~~~~g~~~v~~~~~~-s~l~~~~~~~~~v~~~H~H~y~vn~~~v~~l~~~g~~v~A~s~dg~~ieaie~~~~p~~lG 249 (289)
T 2v4u_A 171 LGGTMRLGIRRTVFKTEN-SILRKLYGDVPFIEERHRHRFEVNPNLIKQFEQNDLSFVGQDVDGDRMEIIELANHPYFVG 249 (289)
T ss_dssp SSCBCEEEEEEEEESCSC-CHHHHHTTSCSEEEEEEEECEEECGGGSGGGTTSSEEEEEEETTSCSEEEEEESSSSCEEE
T ss_pred cCCccccceEEEEEecCC-CHHHHhcCCCceEEEecccccccCHHHHHhcccCCeEEEEEcCCCCeEEEEEcCCCCeEEE
Confidence 789999999999987 55 7888888644578899999999999999888338999999999885599999999999999
Q ss_pred EcccCCCcCCCCCchHHHHHHHHHHhcchhhhhcccCC
Q 007533 520 VQFHPEYKSRPGKPSPLFLGLIAAACGQLDTLIQGSGS 557 (599)
Q Consensus 520 vQFHPE~ss~p~~p~pLF~~Fv~aa~~~~~~~~~~~~~ 557 (599)
||||||+.+++.+++++|.+|+++|.++..+++++.+.
T Consensus 250 vQfHPE~~~~~~~~~~lf~~Fv~~~~~~~~~~~~~~~~ 287 (289)
T 2v4u_A 250 VQFHPEFSSRPMKPSPPYLGLLLAATGNLNAYLQQGCK 287 (289)
T ss_dssp ESSBGGGGCBTTBCCHHHHHHHHHHHTCHHHHHHTTCT
T ss_pred EECCCCCCCCCCchHHHHHHHHHHHHhhhhhhhhcccc
Confidence 99999999998888999999999999999988865543
No 7
>2w7t_A CTP synthetase, putative cytidine triphosphate synthase; glutaminase domain, trypsanosoma brucei, ligase, acivicin; HET: 5CS; 2.10A {Trypanosoma brucei}
Probab=100.00 E-value=6.8e-46 Score=379.68 Aligned_cols=252 Identities=43% Similarity=0.706 Sum_probs=217.9
Q ss_pred ceEEEEEeec-CCCcchHHHHHHHHHHcCCcceeeeEEEEecCCCCCCccccCCchhhhHHHHhccCCCEEEeCCCCCCC
Q 007533 295 PVRIAMVGKY-TGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNR 373 (599)
Q Consensus 295 ~v~IaiVGkY-~~l~DaY~SIi~AL~haG~~~~v~v~i~wi~s~~le~~~~~~~p~~y~~a~~~L~~~DGIlVPGGfG~r 373 (599)
+++||||||| ..+.|+|.|+.++|++++.++.+++.+.|++++++++++. ..+++.+.++||||||||||++
T Consensus 8 ~~~Iaivg~y~~~~~dny~S~~~aL~~~g~~~~~~v~v~~~~~~~~~~~~~-------~~~~~~~~~~dgiil~GG~~~~ 80 (273)
T 2w7t_A 8 TVRIAFVGKYLQDAGDTYFSVLQCFEHCQIALQVRLDILYVDSEELEGPNA-------DEARKALLGCDGIFVPGGFGNR 80 (273)
T ss_dssp CEEEEEEECCHHHHTTTTHHHHHHHHHHHHHHTCCEEEEEEEGGGGSSTTT-------HHHHHHHHTCSEEEECCCCTTT
T ss_pred CCEEEEEeCCCcCCchHHHHHHHHHHHHHHhcCCceEEeccChhhcccccc-------hhHHHHHhhCCEEEecCCCCCc
Confidence 3899999999 6888999999999999999988889999999877653210 0123567899999999999999
Q ss_pred chhHHHHHHHHHHHcCCCEEEEehhHHHHHHHhccccccccCCCccccCCCCCCCeeeeCCCCCcCcCCCccccCceeeE
Q 007533 374 GVQGKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMRLGSRRTY 453 (599)
Q Consensus 374 g~eg~i~aik~are~~iP~LGICLGmQll~iefgr~Vlgl~dA~S~Ef~~~~~~~vi~~mpe~~~~~~GgtmrLG~~~v~ 453 (599)
..++.+.++++++++++|+||||+|||+|+.+||++|.++++++|.|+++++++|++.+|+ .....++++|++|.+++.
T Consensus 81 ~~~~~~~~i~~~~~~~~PilGIC~G~Qll~~a~Gg~v~~~~~~~s~E~~~~~~~~~l~~~~-~~~~~~~~~~~~g~~~v~ 159 (273)
T 2w7t_A 81 GVDGKCAAAQVARMNNIPYFGVXLGMQVAVIELSRNVVGWSDANSEEFNKESTHQVVRIMD-CDRNKMGANMHLGACDVY 159 (273)
T ss_dssp THHHHHHHHHHHHHHTCCEEEETHHHHHHHHHHHHHTTCCTTCEETTTCTTCSCEEEECCG-GGBCSSCBCCEEEEEEEE
T ss_pred CchhHHHHHHHHHHCCCcEEEECcCHHHHHHHHhCccccccCCchhhcccccCCCceeecc-ccccccCCcccccceEEE
Confidence 8889999999999999999999999999999999999999999999998888888887774 334445678899999998
Q ss_pred Eec-CCchhhhccCCceeEEeeeeeeeeeCchhhhhhccCCeEEEEEeCC----CCeEEEEEeCCCCeEEEEcccCCCcC
Q 007533 454 FQI-KDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDET----SQRMEIVELPNHPYFIGVQFHPEYKS 528 (599)
Q Consensus 454 l~~-~~s~l~~iyg~~~~I~erHrHrYeVnp~~v~~le~~Gl~~sa~s~d----g~~vE~iE~~~hpffvGvQFHPE~ss 528 (599)
+.. + +.+.++|+....++++|+|||+|++++++.+++.|++++|++++ |..+|++|++++||++|||||||+++
T Consensus 160 ~~~~~-s~l~~~~~~~~~v~~~H~Hsy~v~~~~v~~l~~~g~~v~A~s~d~~~~g~~ieaie~~~~p~~~GvQfHPE~~~ 238 (273)
T 2w7t_A 160 IVEKS-SIMAKIYSKSNIVVERHRHRYEVNTAYFEDLRKAGLCISAVTDPTFSSRCRVEAVENPSLRFFLAVQFHPEFIS 238 (273)
T ss_dssp ECCTT-SHHHHHTTTCSEEEEEEEECCEECGGGHHHHHHTTCEEEEESCTTCCTTCCEEEEECTTSSSEEEESSCGGGSC
T ss_pred EecCC-cHHHHHhCCCceEEeecccccccCHHHHHhhccCCcEEEEEcCCcCCCCCeEEEEEcCCCCeEEEEeCCCCcCC
Confidence 864 5 67788886566788999999999999988775689999999998 54699999999999999999999999
Q ss_pred CCCCchHHHHHHHHHHhcchhhhhccc
Q 007533 529 RPGKPSPLFLGLIAAACGQLDTLIQGS 555 (599)
Q Consensus 529 ~p~~p~pLF~~Fv~aa~~~~~~~~~~~ 555 (599)
++.++++||.+|+++|.+++++++++.
T Consensus 239 ~~~~~~~l~~~Fv~~~~~~~~~~~~~~ 265 (273)
T 2w7t_A 239 TPMDPAPTYLSFMAAAAKKDYVWPQKC 265 (273)
T ss_dssp BTTBCCHHHHHHHHHHHTCCCCCCSSC
T ss_pred CCCchHHHHHHHHHHHHHHHHhhhhcC
Confidence 988789999999999999888877543
No 8
>1a9x_B Carbamoyl phosphate synthetase (small chain); amidotransferase, thioester; HET: CYG ADP; 1.80A {Escherichia coli} SCOP: c.8.3.1 c.23.16.1 PDB: 1bxr_B* 1ce8_B* 1jdb_C* 1cs0_B* 1m6v_B* 1c30_B* 1c3o_B* 1kee_B* 1t36_B*
Probab=100.00 E-value=2e-35 Score=314.91 Aligned_cols=291 Identities=21% Similarity=0.253 Sum_probs=209.3
Q ss_pred EeeeeeeeecCCCccccCCchhhhhhhhcCCCcccEEEEecCCCCChhhhhccccCCCCCCCCeeeeCCCCCccchhHHH
Q 007533 178 IHVSLVPVLNVVGEQKTKPTQHSVRGLRGQGLTPNILACRSTVALDDNVKGKLSQFCHVPEQNIITLYDVPNIWHIPLLL 257 (599)
Q Consensus 178 ihv~~vp~~~~~~e~ktkptq~sv~~Lrs~Gi~pd~iv~R~~~~l~~~~~~Kislfc~v~~~~Vi~~~dv~tiy~vPl~L 257 (599)
|-+---|.|...|=-+ .+.+|.+++..++|||+..+.+++||++.+|..|++.++|+++.++|||. +.+.|
T Consensus 51 i~~~t~P~iGn~Gv~~--------~d~es~~~~~~g~vv~~~~~~~s~~~~~~~l~~~l~~~~i~gi~giDTR~-lt~~i 121 (379)
T 1a9x_B 51 IVTLTYPHIGNVGTND--------ADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRK-LTRLL 121 (379)
T ss_dssp EEEECSSBCCTTCCCG--------GGCSSSSCCBSEEECSBCCSCCCCTTCCSCHHHHHHHTTCEEEESSCHHH-HHHHH
T ss_pred eeEEcCCCccEEccCc--------hhhccccceEEEEEEccCCCCCCcccccCCHHHHHHHCCCccccCCCHHH-HHHHH
Confidence 3344456676555422 36899999999999999999999999999999999999999999999995 77889
Q ss_pred H--HHHHHHHHHc-CCCCCCCchhhHHHH-----HHHhhhcC-------CCC----------------ceEEEEEeecCC
Q 007533 258 R--KAHEAIFKVL-NLQGTTKEPLLKEWT-----SRAEICDG-------LHE----------------PVRIAMVGKYTG 306 (599)
Q Consensus 258 ~--g~~~~i~~~l-~l~~~~~~~~l~~W~-----~l~~~~~~-------~~~----------------~v~IaiVGkY~~ 306 (599)
| |.|++++..- ..+.....+.+..|. +++..++. +.. ..+|+++ +|+
T Consensus 122 R~~G~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~vs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~vi-D~G- 199 (379)
T 1a9x_B 122 REKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEAYSWTQGSWTLTGGLPQAKKEDELPFHVVAY-DFG- 199 (379)
T ss_dssp HHHCCEEEEEEESSSCCHHHHHHHHHHCCCSTTCBCHHHHSCSSCEEECCCCCBTTTBSCCCCCGGGCCEEEEEE-ESS-
T ss_pred HhcCCeeEEEecCCCCCHHHHHHHHHhCCCccccCccceeCCCCCEEeCCCCcccccccccccccccCCCEEEEE-ECC-
Confidence 8 7775443210 000000000122222 12333221 111 4789999 586
Q ss_pred CcchHHHHHHHHHHcCCcceeeeEEEEecCCCCCCccccCCchhhhHHHHh-ccCCCEEEeCCCCCCCch-hHHHHHHHH
Q 007533 307 LSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKL-LKGADGILVPGGFGNRGV-QGKILAAKY 384 (599)
Q Consensus 307 l~DaY~SIi~AL~haG~~~~v~v~i~wi~s~~le~~~~~~~p~~y~~a~~~-L~~~DGIlVPGGfG~rg~-eg~i~aik~ 384 (599)
...|++++|+.+|+.+.+ .+.+. +. .+. ..++||||||||||++.. ...+.++++
T Consensus 200 ---~k~ni~r~L~~~G~~v~v----vp~~~-~~---------------e~i~~~~~DGliLsGGPgdp~~~~~~~~~Ir~ 256 (379)
T 1a9x_B 200 ---AKRNILRMLVDRGCRLTI----VPAQT-SA---------------EDVLKMNPDGIFLSNGPGDPAPCDYAITAIQK 256 (379)
T ss_dssp ---CCHHHHHHHHHTTEEEEE----EETTC-CH---------------HHHHTTCCSEEEECCCSBCSTTCHHHHHHHHH
T ss_pred ---ChHHHHHHHHHCCCEEEE----EeccC-CH---------------HHHhhcCCCEEEEeCCCCChHHHHHHHHHHHH
Confidence 447899999999987643 22221 11 012 247999999999999864 678889999
Q ss_pred HHHcCCCEEEEehhHHHHHHHhccccccccCCCccccCCCCCCCeeeeCCCCCcCcCCCccccCceeeEEecCCchhhhc
Q 007533 385 AREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMRLGSRRTYFQIKDCKSAKL 464 (599)
Q Consensus 385 are~~iP~LGICLGmQll~iefgr~Vlgl~dA~S~Ef~~~~~~~vi~~mpe~~~~~~GgtmrLG~~~v~l~~~~s~l~~i 464 (599)
+.+.++|+||||||||+|+.++|+++.+++ .+|+|+ ++++...+.
T Consensus 257 ~~~~~~PILGIClG~QLLa~A~GG~v~k~~-----------------------~gh~g~-----n~pv~~~~~------- 301 (379)
T 1a9x_B 257 FLETDIPVFGICLGHQLLALASGAKTVKMK-----------------------FGHHGG-----NHPVKDVEK------- 301 (379)
T ss_dssp HTTSCCCEEEETHHHHHHHHHTTCCEEEEE-----------------------EEEEEE-----EEEEEETTT-------
T ss_pred HHHcCCCEEEECchHHHHHHHhCcEEEecc-----------------------cccccC-----ceeeEecCC-------
Confidence 999999999999999999999999986542 134444 455542221
Q ss_pred cCCceeEEeeeeeeeeeCchhhhhhccCCeEEEEEe-CCCCeEEEEEeCCCCeEEEEcccCCCcCCCCCchHHHHHHHHH
Q 007533 465 YGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKD-ETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFLGLIAA 543 (599)
Q Consensus 465 yg~~~~I~erHrHrYeVnp~~v~~le~~Gl~~sa~s-~dg~~vE~iE~~~hpffvGvQFHPE~ss~p~~p~pLF~~Fv~a 543 (599)
+...+ ..++|+|.|+++. + +.++.+++++ .|+. +|+++++++|+ +|+|||||+++.|.+..+||.+|+++
T Consensus 302 --g~v~i-ts~~H~~aV~~~~---L-p~~~~v~a~s~~Dg~-ieai~~~~~pi-~gVQFHPE~~~~p~d~~~Lf~~Fl~~ 372 (379)
T 1a9x_B 302 --NVVMI-TAQNHGFAVDEAT---L-PANLRVTHKSLFDGT-LQGIHRTDKPA-FSFQGNPEASPGPHDAAPLFDHFIEL 372 (379)
T ss_dssp --TEEEE-EEEEEEEEECSTT---C-CTTEEEEEEETTTCC-EEEEEESSSSE-EEESSCTTCSSSCSTTTHHHHHHHHH
T ss_pred --CcEEE-EecCccceEeccc---C-CCCeEEEEEeCCCCc-EEEEEECCCCE-EEEEeCCcCCCCcccHHHHHHHHHHH
Confidence 12223 4678999998653 3 6689999998 5676 99999999984 69999999999998889999999998
Q ss_pred Hhc
Q 007533 544 ACG 546 (599)
Q Consensus 544 a~~ 546 (599)
+.+
T Consensus 373 ~~~ 375 (379)
T 1a9x_B 373 IEQ 375 (379)
T ss_dssp HHH
T ss_pred HHH
Confidence 864
No 9
>3fij_A LIN1909 protein; 11172J, uncharacterized protein, nysgrc, PSI-II, structural genomics, protein structure initiative; 2.30A {Listeria innocua}
Probab=99.95 E-value=2.5e-27 Score=239.45 Aligned_cols=210 Identities=20% Similarity=0.289 Sum_probs=145.4
Q ss_pred ceEEEEEeecCC----------CcchHHHHHHHHHHcCCcceeeeEEEEecCCCCCCccccCCchhhhHHHHhccCCCEE
Q 007533 295 PVRIAMVGKYTG----------LSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGI 364 (599)
Q Consensus 295 ~v~IaiVGkY~~----------l~DaY~SIi~AL~haG~~~~v~v~i~wi~s~~le~~~~~~~p~~y~~a~~~L~~~DGI 364 (599)
++.|||...+.. ..-.+.+++++|+.+|+...+ ++..+-. . +.+.++.+|||
T Consensus 4 ~p~IGi~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG~~pv~------lp~~~~~-----------~-~~~~l~~~DGl 65 (254)
T 3fij_A 4 KPVIGITGNRLVKGVDVFYGHRVTYTQQRYVDAIQKVGGFPIA------LPIDDPS-----------T-AVQAISLVDGL 65 (254)
T ss_dssp CCEEEEEC------------------CHHHHHHHHHHTCEEEE------ECCCCGG-----------G-HHHHHHTCSEE
T ss_pred CCEEEEeCCcccccccccCCcchhhhhHHHHHHHHHCCCEEEE------EeCCCch-----------H-HHHHHhhCCEE
Confidence 357898865321 111245789999999987633 2221100 0 22457899999
Q ss_pred EeCCCCC-------CCch-----------hHHHHHHHHHHHcCCCEEEEehhHHHHHHHhccccccccCCCccccCCCCC
Q 007533 365 LVPGGFG-------NRGV-----------QGKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTK 426 (599)
Q Consensus 365 lVPGGfG-------~rg~-----------eg~i~aik~are~~iP~LGICLGmQll~iefgr~Vlgl~dA~S~Ef~~~~~ 426 (599)
|||||++ .+.. ..++.++++|+++++|+||||+|||+|+.++|+++.. +..+. ..
T Consensus 66 il~GG~~v~P~~yg~~~~~~~~~~~~~rd~~~~~lir~a~~~~~PiLGIC~G~Qll~~a~Gg~v~~--~~~~~-~~---- 138 (254)
T 3fij_A 66 LLTGGQDITPQLYLEEPSQEIGAYFPPRDSYEIALVRAALDAGKPIFAICRGMQLVNVALGGTLYQ--DISQV-ET---- 138 (254)
T ss_dssp EECCCSCCCGGGGTCCCCTTCCCCCHHHHHHHHHHHHHHHHTTCCEEEETHHHHHHHHHTTCCEES--SGGGS-SS----
T ss_pred EECCCCCCChhhcCCccCcccCCcChhhhHHHHHHHHHHHHcCCCEEEECHHHHHHHHHhCCceec--ccccc-cC----
Confidence 9999964 2211 2378999999999999999999999999999999853 22111 00
Q ss_pred CCeeeeCCCCCcCcCC-CccccCceeeEEecCCchhhhccCCceeEEeeeeeeeeeCchhhhhhccCCeEEEEEeCCCCe
Q 007533 427 NPCVIFMPEGSKTHMG-GTMRLGSRRTYFQIKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQR 505 (599)
Q Consensus 427 ~~vi~~mpe~~~~~~G-gtmrLG~~~v~l~~~~s~l~~iyg~~~~I~erHrHrYeVnp~~v~~le~~Gl~~sa~s~dg~~ 505 (599)
+. ..|+. ..+++|.+++.+.++ +.+.+.++....++.+ |.+.|. .+ +.|++++|++++|.
T Consensus 139 -~~--------~~h~~~~~~~~g~~~v~~~~~-s~l~~~~~~~~~v~~~--H~~~v~-----~l-~~g~~v~a~s~dg~- 199 (254)
T 3fij_A 139 -KA--------LQHLQRVDEQLGSHTIDIEPT-SELAKHHPNKKLVNSL--HHQFIK-----KL-APSFKVTARTADGM- 199 (254)
T ss_dssp -CC--------CCCBCCSCTTSCCEEEEECTT-SSGGGTCCTTEEECCB--CSCEES-----SC-CSSEEEEEEETTCC-
T ss_pred -cc--------ccccCCCCCccceEEEEeCCC-ChHHHhcCCcEEEEEe--ccchhh-----cc-CCCcEEEEEeCCCc-
Confidence 01 11221 235677889998887 6677777644345443 555553 34 78999999999996
Q ss_pred EEEEEeC-CCCeEEEEcccCCCcCCCCC-chHHHHHHHHHHhcch
Q 007533 506 MEIVELP-NHPYFIGVQFHPEYKSRPGK-PSPLFLGLIAAACGQL 548 (599)
Q Consensus 506 vE~iE~~-~hpffvGvQFHPE~ss~p~~-p~pLF~~Fv~aa~~~~ 548 (599)
+|+++++ ++||++|||||||+++++.. ..+||++|+++|....
T Consensus 200 ieai~~~~~~~~~~gvQfHPE~~~~~~~~~~~lf~~Fv~~~~~~~ 244 (254)
T 3fij_A 200 IEAVEGDNLPSWYLGVQWHPELMFQTDPESEQLFQALVDESKKTM 244 (254)
T ss_dssp EEEEEESSCSSCEEEESSCGGGTGGGCHHHHHHHHHHHHHHHSCC
T ss_pred EEEEEecCCCCeEEEEEcCCccCCCCCchHHHHHHHHHHHHHHHH
Confidence 9999999 99988999999999998643 3789999999987643
No 10
>2a9v_A GMP synthase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, ligase; 2.24A {Thermoplasma acidophilum} SCOP: c.23.16.1
Probab=99.92 E-value=1.2e-24 Score=214.24 Aligned_cols=189 Identities=21% Similarity=0.298 Sum_probs=135.4
Q ss_pred CceEEEEEeecCCCcchHHHHHHHHHHcCCcceeeeEEEEecCCCCCCccccCCchhhhHHHHhccCCCEEEeCCC-CCC
Q 007533 294 EPVRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGG-FGN 372 (599)
Q Consensus 294 ~~v~IaiVGkY~~l~DaY~SIi~AL~haG~~~~v~v~i~wi~s~~le~~~~~~~p~~y~~a~~~L~~~DGIlVPGG-fG~ 372 (599)
.-+||.+++.|.+.. .++.++|+.+|+.+.+ ++..+ . + +.+.++|||||||| +++
T Consensus 12 ~~~~i~~id~~~~~~---~~~~~~l~~~G~~~~v------v~~~~-~-------~-------~~l~~~DglIl~GG~p~~ 67 (212)
T 2a9v_A 12 HMLKIYVVDNGGQWT---HREWRVLRELGVDTKI------VPNDI-D-------S-------SELDGLDGLVLSGGAPNI 67 (212)
T ss_dssp CCCBEEEEEESCCTT---CHHHHHHHHTTCBCCE------EETTS-C-------G-------GGGTTCSEEEEEEECSCG
T ss_pred ccceEEEEeCCCccH---HHHHHHHHHCCCEEEE------EeCCC-C-------H-------HHHhCCCEEEECCCCCCC
Confidence 457999997665432 3788999999987643 22211 0 1 34667999999999 777
Q ss_pred Cchh-HHHHHHHHHHHcCCCEEEEehhHHHHHHHhccccccccCCCccccCCCCCCCeeeeCCCCCcCcCCCccccCcee
Q 007533 373 RGVQ-GKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMRLGSRR 451 (599)
Q Consensus 373 rg~e-g~i~aik~are~~iP~LGICLGmQll~iefgr~Vlgl~dA~S~Ef~~~~~~~vi~~mpe~~~~~~GgtmrLG~~~ 451 (599)
...+ ......++++++++|+||||+|||+|+.++|+++...+ .+++ |.++
T Consensus 68 ~~~~~~~~~l~~~~~~~~~PiLGIC~G~Qll~~~lGg~v~~~~-----------------------~~~~------G~~~ 118 (212)
T 2a9v_A 68 DEELDKLGSVGKYIDDHNYPILGICVGAQFIALHFGASVVKAK-----------------------HPEF------GKTK 118 (212)
T ss_dssp GGTGGGHHHHHHHHHHCCSCEEEETHHHHHHHHHTTCEEEEEE-----------------------EEEE------EEEE
T ss_pred CcccccchhHHHHHHhCCCCEEEEChHHHHHHHHhCCEEEcCC-----------------------Cccc------Ccee
Confidence 6432 23344567788999999999999999999998875421 0222 3456
Q ss_pred eEEecCCchhhhccCCceeEEeeeeeeeeeCchhhhhhccCCeEEEEEeCCCCeEEEEEeCCCCeEEEEcccCCCcCCCC
Q 007533 452 TYFQIKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPG 531 (599)
Q Consensus 452 v~l~~~~s~l~~iyg~~~~I~erHrHrYeVnp~~v~~le~~Gl~~sa~s~dg~~vE~iE~~~hpffvGvQFHPE~ss~p~ 531 (599)
+.+.++ +.+.+.++. .+..+|.|+|.+. .+ +.+++++|+++++. +++++++++| ++|+|||||++.++.
T Consensus 119 v~~~~~-~~l~~~~~~--~~~v~~~H~~~v~-----~l-~~~~~vlA~s~d~~-i~ai~~~~~~-i~gvQfHPE~~~~~~ 187 (212)
T 2a9v_A 119 VSVMHS-ENIFGGLPS--EITVWENHNDEII-----NL-PDDFTLAASSATCQ-VQGFYHKTRP-IYATQFHPEVEHTQY 187 (212)
T ss_dssp EEESCC-CGGGTTCCS--EEEEEEEEEEEEE-----SC-CTTEEEEEECSSCS-CSEEEESSSS-EEEESSCTTSTTSTT
T ss_pred eEECCC-ChhHhcCCC--ceEEEeEhhhhHh-----hC-CCCcEEEEEeCCCC-EEEEEECCCC-EEEEEeCCCCCCCcc
Confidence 666655 333333332 3445788998874 23 67899999999886 9999999887 579999999998654
Q ss_pred CchHHHHHHHHHHhcc
Q 007533 532 KPSPLFLGLIAAACGQ 547 (599)
Q Consensus 532 ~p~pLF~~Fv~aa~~~ 547 (599)
+.++|++|+++|..+
T Consensus 188 -g~~l~~~F~~~~~~~ 202 (212)
T 2a9v_A 188 -GRDIFRNFIGICASY 202 (212)
T ss_dssp -HHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHHh
Confidence 689999999987653
No 11
>1qdl_B Protein (anthranilate synthase (TRPG-SUBUNIT)); tryptophan biosynthesis, glutamine amidotransferase, allosteric interaction, lyase; 2.50A {Sulfolobus solfataricus} SCOP: c.23.16.1
Probab=99.92 E-value=3.4e-24 Score=207.73 Aligned_cols=181 Identities=18% Similarity=0.266 Sum_probs=127.1
Q ss_pred EEEEeecCCCcchHHHHHHHHHHcCCcceeeeEEEEecCCCCCCccccCCchhhhHHHHhcc--CCCEEEeCCCCCCCch
Q 007533 298 IAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLK--GADGILVPGGFGNRGV 375 (599)
Q Consensus 298 IaiVGkY~~l~DaY~SIi~AL~haG~~~~v~v~i~wi~s~~le~~~~~~~p~~y~~a~~~L~--~~DGIlVPGGfG~rg~ 375 (599)
|+|++.|.+. . .++.++|+.+|+++.+ +...+.+ + +.+. ++||||+|||+|++..
T Consensus 4 i~iid~~~s~--~-~~~~~~l~~~G~~~~v------~~~~~~~-------~-------~~~~~~~~dglil~gG~~~~~~ 60 (195)
T 1qdl_B 4 TLIIDNYDSF--V-YNIAQIVGELGSYPIV------IRNDEIS-------I-------KGIERIDPDRLIISPGPGTPEK 60 (195)
T ss_dssp EEEEECSCSS--H-HHHHHHHHHTTCEEEE------EETTTSC-------H-------HHHHHHCCSEEEECCCSSCTTS
T ss_pred EEEEECCCch--H-HHHHHHHHhCCCEEEE------EeCCCCC-------H-------HHHhhCCCCEEEECCCCCChhh
Confidence 9999766543 2 3788999999977643 2222110 0 1222 6999999999988754
Q ss_pred ---h-HHHHHHHHHHHcCCCEEEEehhHHHHHHHhccccccccCCCccccCCCCCCCeeeeCCCCCcCcCCCccccCcee
Q 007533 376 ---Q-GKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMRLGSRR 451 (599)
Q Consensus 376 ---e-g~i~aik~are~~iP~LGICLGmQll~iefgr~Vlgl~dA~S~Ef~~~~~~~vi~~mpe~~~~~~GgtmrLG~~~ 451 (599)
. ....+++++ +.++|+||||+|||+|+.++|+++...+. ..+ |+ .++
T Consensus 61 ~~~~~~~~~~i~~~-~~~~PvLGIC~G~QlL~~~~gg~v~~~~~----------------------~~~-g~-----~~~ 111 (195)
T 1qdl_B 61 REDIGVSLDVIKYL-GKRTPILGVCLGHQAIGYAFGAKIRRARK----------------------VFH-GK-----ISN 111 (195)
T ss_dssp HHHHTTHHHHHHHH-TTTSCEEEETHHHHHHHHHTTCEEEEEEE----------------------EEE-EE-----EEE
T ss_pred hhhhhHHHHHHHHh-cCCCcEEEEehHHHHHHHHhCCEEeccCC----------------------CcC-CC-----ceE
Confidence 2 234777775 77999999999999999999998854321 012 21 234
Q ss_pred eEEecCC--chhhhccCCceeEEeeeeeeeeeCchhhhhhccCCeEEEEEe-CCCCeEEEEEeCCCCeEEEEcccCCCcC
Q 007533 452 TYFQIKD--CKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKD-ETSQRMEIVELPNHPYFIGVQFHPEYKS 528 (599)
Q Consensus 452 v~l~~~~--s~l~~iyg~~~~I~erHrHrYeVnp~~v~~le~~Gl~~sa~s-~dg~~vE~iE~~~hpffvGvQFHPE~ss 528 (599)
+.+.+++ .++.. ++ ..+..++.|+|.|. .+ +.+++++|++ ++|. +++++++++| ++|+|||||++.
T Consensus 112 v~~~~~~~~~l~~~-~~--~~~~v~~~H~~~v~-----~l-~~~~~vla~s~~~g~-i~a~~~~~~~-~~gvQfHPE~~~ 180 (195)
T 1qdl_B 112 IILVNNSPLSLYYG-IA--KEFKATRYHSLVVD-----EV-HRPLIVDAISAEDNE-IMAIHHEEYP-IYGVQFHPESVG 180 (195)
T ss_dssp EEECCSSCCSTTTT-CC--SEEEEEEEEEEEEE-----CC-CTTEEEEEEESSSCC-EEEEEESSSS-EEEESSBTTSTT
T ss_pred EEECCCCHhHHHhc-CC--CceEEeccccchhh-----hC-CCCcEEEEEECCCCc-EEEEEeCCCC-EEEEecCCCCCC
Confidence 4444442 23333 32 23456788998884 23 6789999999 7886 9999999988 579999999998
Q ss_pred CCCCchHHHHHHHH
Q 007533 529 RPGKPSPLFLGLIA 542 (599)
Q Consensus 529 ~p~~p~pLF~~Fv~ 542 (599)
++ .+.++|++|++
T Consensus 181 ~~-~g~~l~~~f~~ 193 (195)
T 1qdl_B 181 TS-LGYKILYNFLN 193 (195)
T ss_dssp CT-THHHHHHHHHH
T ss_pred Cc-cHHHHHHHHHh
Confidence 65 47899999987
No 12
>1wl8_A GMP synthase [glutamine-hydrolyzing] subunit A; transferase, gatases, riken structural genomics/proteomics initiative, RSGI; 1.45A {Pyrococcus horikoshii} SCOP: c.23.16.1 PDB: 2d7j_A
Probab=99.91 E-value=9e-24 Score=203.20 Aligned_cols=183 Identities=22% Similarity=0.254 Sum_probs=127.2
Q ss_pred EEEEEeecCCCcchHHHHHHHHHHcCCcceeeeEEEEecCCCCCCccccCCchhhhHHHHhc--cCCCEEEeCCCCCCCc
Q 007533 297 RIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLL--KGADGILVPGGFGNRG 374 (599)
Q Consensus 297 ~IaiVGkY~~l~DaY~SIi~AL~haG~~~~v~v~i~wi~s~~le~~~~~~~p~~y~~a~~~L--~~~DGIlVPGGfG~rg 374 (599)
.|+|++ |... ...++.++|+.+|+.+.+ ++..+ ++ +.+ .++||||+|||+ ++.
T Consensus 2 mi~iid-~~~~--~~~~~~~~l~~~G~~~~~------~~~~~--------~~-------~~~~~~~~dglil~Gg~-~~~ 56 (189)
T 1wl8_A 2 MIVIMD-NGGQ--YVHRIWRTLRYLGVETKI------IPNTT--------PL-------EEIKAMNPKGIIFSGGP-SLE 56 (189)
T ss_dssp EEEEEE-CSCT--THHHHHHHHHHTTCEEEE------EETTC--------CH-------HHHHHTCCSEEEECCCS-CTT
T ss_pred eEEEEE-CCCc--hHHHHHHHHHHCCCeEEE------EECCC--------Ch-------HHhcccCCCEEEECCCC-Chh
Confidence 489995 5422 245899999999987643 22211 00 122 469999999998 543
Q ss_pred hhH-HHHHHHHHHHcCCCEEEEehhHHHHHHHhccccccccCCCccccCCCCCCCeeeeCCCCCcCcCCCccccCceeeE
Q 007533 375 VQG-KILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMRLGSRRTY 453 (599)
Q Consensus 375 ~eg-~i~aik~are~~iP~LGICLGmQll~iefgr~Vlgl~dA~S~Ef~~~~~~~vi~~mpe~~~~~~GgtmrLG~~~v~ 453 (599)
..+ ...+++.+.+.++|+||||+|||+|+.++|+++..++. .++|+ ..+.
T Consensus 57 ~~~~~~~~i~~~~~~~~PilGIC~G~Q~l~~~~gg~v~~~~~-----------------------~~~G~------~~~~ 107 (189)
T 1wl8_A 57 NTGNCEKVLEHYDEFNVPILGICLGHQLIAKFFGGKVGRGEK-----------------------AEYSL------VEIE 107 (189)
T ss_dssp CCTTHHHHHHTGGGTCSCEEEETHHHHHHHHHHTCEEEECSC-----------------------CSCEE------EEEE
T ss_pred hhhhHHHHHHHHhhCCCeEEEEcHHHHHHHHHhCCceecCCC-----------------------cccCc------eeEE
Confidence 333 46777777688999999999999999999998854321 23343 2333
Q ss_pred EecCCchhhhccCCceeEEeeeeeeeeeCchhhhhhccCCeEEEEEeCCCCeEEEEEeCCCCeEEEEcccCCCcCCCCCc
Q 007533 454 FQIKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKP 533 (599)
Q Consensus 454 l~~~~s~l~~iyg~~~~I~erHrHrYeVnp~~v~~le~~Gl~~sa~s~dg~~vE~iE~~~hpffvGvQFHPE~ss~p~~p 533 (599)
+...++++..+ +. .+..+|.|...+. .+ +.+++++|++++|. +++++++++| ++|+|||||++..+ .+
T Consensus 108 ~~~~~~l~~~~-~~--~~~~~~~h~~~v~-----~l-~~~~~vla~s~~g~-i~a~~~~~~~-~~gvQfHPE~~~~~-~g 175 (189)
T 1wl8_A 108 IIDEXEIFKGL-PK--RLKVWESHMDEVK-----EL-PPKFKILARSETCP-IEAMKHEELP-IYGVQFHPEVAHTE-KG 175 (189)
T ss_dssp ESCC--CCTTS-CS--EEEEEECCSEEEE-----EC-CTTEEEEEEESSCS-CSEEEESSSC-EEEESSCTTSTTST-TH
T ss_pred EecCchHHhCC-CC--ceEEEEEeeeehh-----hC-CCCcEEEEEcCCCC-EEEEEeCCce-EEEEecCCCcCCCc-ch
Confidence 33332444332 22 3445687876653 34 67899999999986 9999999998 57999999998765 46
Q ss_pred hHHHHHHHHHHh
Q 007533 534 SPLFLGLIAAAC 545 (599)
Q Consensus 534 ~pLF~~Fv~aa~ 545 (599)
..+|++|+++|.
T Consensus 176 ~~l~~~f~~~~~ 187 (189)
T 1wl8_A 176 EEILRNFAKLCG 187 (189)
T ss_dssp HHHHHHHHHHHC
T ss_pred HHHHHHHHHHHh
Confidence 899999999874
No 13
>4gud_A Imidazole glycerol phosphate synthase subunit His; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE 1PE; 1.91A {Vibrio cholerae}
Probab=99.91 E-value=1.5e-24 Score=211.63 Aligned_cols=199 Identities=17% Similarity=0.181 Sum_probs=120.4
Q ss_pred EEEEEeecCCCcchHHHHHHHHHHcCCcceeeeEEEEecCCCCCCccccCCchhhhHHHHhccCCCEEEeCCCCCCCchh
Q 007533 297 RIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRGVQ 376 (599)
Q Consensus 297 ~IaiVGkY~~l~DaY~SIi~AL~haG~~~~v~v~i~wi~s~~le~~~~~~~p~~y~~a~~~L~~~DGIlVPGGfG~rg~e 376 (599)
||+|| ||+.. +..||.+||+++|+++.+ +. +| +.+.++||||+||| |++...
T Consensus 4 ~I~ii-D~g~~--n~~si~~al~~~G~~~~v------~~-----------~~-------~~l~~~D~lilPG~-g~~~~~ 55 (211)
T 4gud_A 4 NVVII-DTGCA--NISSVKFAIERLGYAVTI------SR-----------DP-------QVVLAADKLFLPGV-GTASEA 55 (211)
T ss_dssp CEEEE-CCCCT--THHHHHHHHHHTTCCEEE------EC-----------CH-------HHHHHCSEEEECCC-SCHHHH
T ss_pred EEEEE-ECCCC--hHHHHHHHHHHCCCEEEE------EC-----------CH-------HHHhCCCEEEECCC-CCHHHH
Confidence 69999 69854 578999999999998754 21 11 45778999999974 443221
Q ss_pred ----HHHHHHHHHHHcCCCEEEEehhHHHHHHHhccccccccCCCccccCCCCCCCeeeeCCC-CCcCcCCCccccCcee
Q 007533 377 ----GKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPE-GSKTHMGGTMRLGSRR 451 (599)
Q Consensus 377 ----g~i~aik~are~~iP~LGICLGmQll~iefgr~Vlgl~dA~S~Ef~~~~~~~vi~~mpe-~~~~~~GgtmrLG~~~ 451 (599)
....+++.+++.++|+||||+|||+|+.++++++...... .+.-...+.++..+... ....++++ ..
T Consensus 56 ~~~~~~~~~i~~~~~~~~PvlGIClG~QlL~~~~g~~~~~~~~~--~~gl~~~~~~v~~~~~~~~~~~~~~~------~~ 127 (211)
T 4gud_A 56 MKNLTERDLIELVKRVEKPLLGICLGMQLLGKLSEEKGQKADEI--VQCLGLVDGEVRLLQTGDLPLPHMGW------NT 127 (211)
T ss_dssp HHHHHHTTCHHHHHHCCSCEEEETHHHHTTSSEECCC----CCC--EECCCSSSCEEEECCCTTSCSSEEEE------EC
T ss_pred HHHHHhcChHHHHHHcCCCEEEEchhHhHHHHHhCCcccccCCc--cccceeccceEEEcccCCcceeeccc------ee
Confidence 1223467788899999999999999999888876432211 11000111222221111 12233333 23
Q ss_pred eEEecCCchhhhccCCceeEEeeeeeeeeeCchhhhhhccCCeEEEEEeCCCCeEEEEEeCCCCeEEEEcccCCCcCCCC
Q 007533 452 TYFQIKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPG 531 (599)
Q Consensus 452 v~l~~~~s~l~~iyg~~~~I~erHrHrYeVnp~~v~~le~~Gl~~sa~s~dg~~vE~iE~~~hpffvGvQFHPE~ss~p~ 531 (599)
+.....++++..+.. ... .++.|+|.+++ +..++|.+++|. ..++.+.+.|+ +|+|||||.++.
T Consensus 128 ~~~~~~~~l~~~l~~-~~~--~~~~H~~~v~~---------~~~~~a~~~~g~-~~~~~v~~~~v-~GvQFHPE~s~~-- 191 (211)
T 4gud_A 128 VQVKEGHPLFNGIEP-DAY--FYFVHSFAMPV---------GDYTIAQCEYGQ-PFSAAIQAGNY-YGVQFHPERSSK-- 191 (211)
T ss_dssp CEECTTCGGGTTCCT-TCC--EEEEESEECCC---------CTTEEEEEESSS-EEEEEEEETTE-EEESSCGGGSHH--
T ss_pred eeeeccChhhcCCCC-CcE--EEEEeeEEeCC---------CCeEEEEecCCC-eEEEEEeCCCE-EEEEccCEecCc--
Confidence 333444355555542 333 45678887653 334677777886 56666667775 699999997532
Q ss_pred CchHHHHHHHHHHhcc
Q 007533 532 KPSPLFLGLIAAACGQ 547 (599)
Q Consensus 532 ~p~pLF~~Fv~aa~~~ 547 (599)
.+..||++|++.|.+.
T Consensus 192 ~G~~ll~nFl~~~ge~ 207 (211)
T 4gud_A 192 AGARLIQNFLELRGEN 207 (211)
T ss_dssp HHHHHHHHHHHC----
T ss_pred cHHHHHHHHHHHhccc
Confidence 3578999999876543
No 14
>2vpi_A GMP synthase; guanine monophosphate synthetase, phosphoprotein, GMP synthetase, GMP biosynthesis, glutamine amidotransferase, ligase, cytoplasm; 2.40A {Homo sapiens}
Probab=99.90 E-value=4.8e-24 Score=211.14 Aligned_cols=185 Identities=16% Similarity=0.122 Sum_probs=121.9
Q ss_pred eEEEEEeecCCCcchHHHHHHHHHHcCCcceeeeEEEEecCCCCCCccccCCchhhhHHHHhccCCCEEEeCCCCCCCch
Q 007533 296 VRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRGV 375 (599)
Q Consensus 296 v~IaiVGkY~~l~DaY~SIi~AL~haG~~~~v~v~i~wi~s~~le~~~~~~~p~~y~~a~~~L~~~DGIlVPGGfG~rg~ 375 (599)
.+|+|+ +|+.. .-.++.++|+.+|+++.+ .+++.+ .+ ++ ...++||||||||++++..
T Consensus 25 ~~I~ii-D~g~~--~~~~i~~~l~~~G~~~~v----v~~~~~-~~------------~l--~~~~~dglil~Gg~~~~~~ 82 (218)
T 2vpi_A 25 GAVVIL-DAGAQ--YGKVIDRRVRELFVQSEI----FPLETP-AF------------AI--KEQGFRAIIISGGPNSVYA 82 (218)
T ss_dssp TCEEEE-ECSTT--TTHHHHHHHHHTTCCEEE----ECTTCC-HH------------HH--HHHTCSEEEEEC-------
T ss_pred CeEEEE-ECCCc--hHHHHHHHHHHCCCEEEE----EECCCC-hH------------HH--hhcCCCEEEECCCCccccc
Confidence 479999 46532 124899999999987643 233221 10 01 1257999999999876432
Q ss_pred hHHHHHHHHHHHcCCCEEEEehhHHHHHHHhccccccccCCCccccCCCCCCCeeeeCCCCCcCcCCCccccCceeeEEe
Q 007533 376 QGKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMRLGSRRTYFQ 455 (599)
Q Consensus 376 eg~i~aik~are~~iP~LGICLGmQll~iefgr~Vlgl~dA~S~Ef~~~~~~~vi~~mpe~~~~~~GgtmrLG~~~v~l~ 455 (599)
+......+.+++.++|+||||+|||+|+.++|++|...+. .++| .+++.+.
T Consensus 83 ~~~~~~~~~~~~~~~PilGIC~G~Qll~~~~GG~v~~~~~-----------------------~~~G------~~~v~~~ 133 (218)
T 2vpi_A 83 EDAPWFDPAIFTIGKPVLGICYGMQMMNKVFGGTVHKKSV-----------------------REDG------VFNISVD 133 (218)
T ss_dssp --CCCCCGGGGTSSCCEEEETHHHHHHHHHTTCCEEEEEE-----------------------CSCE------EEEEEEC
T ss_pred ccchhHHHHHHHcCCCEEEEcHHHHHHHHHhCCceEeCCC-----------------------Cccc------EEEEEEc
Confidence 1111123345678999999999999999999998854321 1233 4566666
Q ss_pred cCCchhhhccCCceeEEeeeeeeeeeCchhhhhhccCCeEEEEEeCCCCeEEEEEeCCCCeEEEEcccCCCcCCCCCchH
Q 007533 456 IKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSP 535 (599)
Q Consensus 456 ~~~s~l~~iyg~~~~I~erHrHrYeVnp~~v~~le~~Gl~~sa~s~dg~~vE~iE~~~hpffvGvQFHPE~ss~p~~p~p 535 (599)
++ +.+.+.++.. ....+.|+|.|. .+ +.+++++|++ ++ .+++++++++| ++|+|||||++.++. +.+
T Consensus 134 ~~-~~l~~~l~~~--~~v~~~H~~~v~-----~l-~~~~~vlA~s-~~-~i~ai~~~~~~-i~gvQfHPE~~~~~~-g~~ 200 (218)
T 2vpi_A 134 NT-CSLFRGLQKE--EVVLLTHGDSVD-----KV-ADGFKVVARS-GN-IVAGIANESKK-LYGAQFHPEVGLTEN-GKV 200 (218)
T ss_dssp TT-SGGGTTCCSE--EEEEECSEEEES-----SC-CTTCEEEEEE-TT-EEEEEEETTTT-EEEESSCTTSTTSTT-HHH
T ss_pred cC-ChhHhcCCCC--cEEeehhhhHhh-----hc-CCCCEEEEEc-CC-eEEEEEECCCC-EEEEEcCCCCCCChh-HHH
Confidence 65 4444444322 334678998885 23 6789999998 55 59999999888 569999999998764 789
Q ss_pred HHHHHH-HHH
Q 007533 536 LFLGLI-AAA 544 (599)
Q Consensus 536 LF~~Fv-~aa 544 (599)
||++|+ ++|
T Consensus 201 l~~~F~~~~~ 210 (218)
T 2vpi_A 201 ILKNFLYDIA 210 (218)
T ss_dssp HHHHHHTTTT
T ss_pred HHHHHHHHHh
Confidence 999999 554
No 15
>1l9x_A Gamma-glutamyl hydrolase; 1.60A {Homo sapiens} SCOP: c.23.16.1
Probab=99.89 E-value=1.8e-23 Score=217.94 Aligned_cols=205 Identities=16% Similarity=0.148 Sum_probs=128.3
Q ss_pred ceEEEEEeecCCCc------ch--HHHHHHHHHHcCCcceeeeEEEEecCCCCCCccccCCchhhhHHHHhccCCCEEEe
Q 007533 295 PVRIAMVGKYTGLS------DA--YLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILV 366 (599)
Q Consensus 295 ~v~IaiVGkY~~l~------Da--Y~SIi~AL~haG~~~~v~v~i~wi~s~~le~~~~~~~p~~y~~a~~~L~~~DGIlV 366 (599)
++.|||........ -. ..|++++|+.+|+.+.+ .+.+. +. ..+.+.+.++|||||
T Consensus 30 ~P~IGI~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~v----v~~~~-~~------------~~i~~~l~~~dglil 92 (315)
T 1l9x_A 30 KPIIGILMQKCRNKVMKNYGRYYIAASYVKYLESAGARVVP----VRLDL-TE------------KDYEILFKSINGILF 92 (315)
T ss_dssp CCEEEEECEECCSHHHHTTCSEEEEHHHHHHHHHTTCEEEE----ECSSC-CH------------HHHHHHHHHSSEEEE
T ss_pred CCEEEEECCcccccccccCcceehHHHHHHHHHHCCCEEEE----EecCC-CH------------HHHHHHHhcCCEEEE
Confidence 47899997543211 12 23789999999987643 22221 11 112234678999999
Q ss_pred CCCCCCCchh----HHHHHHHHHHHc-----CCCEEEEehhHHHHHHHhccccccccCCCccccCCCCCCCeeeeCCCCC
Q 007533 367 PGGFGNRGVQ----GKILAAKYAREH-----RIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGS 437 (599)
Q Consensus 367 PGGfG~rg~e----g~i~aik~are~-----~iP~LGICLGmQll~iefgr~Vlgl~dA~S~Ef~~~~~~~vi~~mpe~~ 437 (599)
|||+++.... ....+++.+++. ++|+||||+|||+|+.++|+++.... . .+.
T Consensus 93 ~GG~~~v~p~~~~~~~~~l~~~~~~~~~~g~~~PiLGIC~G~Qll~~a~GG~~~~~~-~--~~~---------------- 153 (315)
T 1l9x_A 93 PGGSVDLRRSDYAKVAKIFYNLSIQSFDDGDYFPVWGTCLGFEELSLLISGECLLTA-T--DTV---------------- 153 (315)
T ss_dssp CCCCCCTTTCHHHHHHHHHHHHHHHHHHTTCCCCEEEETHHHHHHHHHHHSSCCCEE-E--EEE----------------
T ss_pred eCCCcccChhhhhHHHHHHHHHHHHHHhcCCCceEEEEChHHHHHHHHhCCcccccc-c--ccc----------------
Confidence 9999874211 123455555555 69999999999999999999853211 0 000
Q ss_pred cCcCCCccccCceeeEEe---cCCchhhhccCC-------ceeEEeeeeeeeeeCchhhhh--hccCCeEEEEEeCCCCe
Q 007533 438 KTHMGGTMRLGSRRTYFQ---IKDCKSAKLYGN-------RTFIDERHRHRYEVNPDMIAR--LENAGLSFTGKDETSQR 505 (599)
Q Consensus 438 ~~~~GgtmrLG~~~v~l~---~~~s~l~~iyg~-------~~~I~erHrHrYeVnp~~v~~--le~~Gl~~sa~s~dg~~ 505 (599)
|. ..++... ++ +.+.+.++. ...+..+ +|+|.|++++++. ..+.|++++|+++||.
T Consensus 154 ----g~-----~~p~~~~~~~~~-s~L~~~~~~~~~~~l~~~~~~~~-~H~~~V~~~~~~~~~~l~~g~~v~A~s~dg~- 221 (315)
T 1l9x_A 154 ----DV-----AMPLNFTGGQLH-SRMFQNFPTELLLSLAVEPLTAN-FHKWSLSVKNFTMNEKLKKFFNVLTTNTDGK- 221 (315)
T ss_dssp ----EE-----EECCEECSTTTT-CSTTTTSCHHHHHHHHHSCCEEE-EEEEECBHHHHHTCHHHHHHEEEEEEEESSS-
T ss_pred ----CC-----CCCeeeccCCCC-ChHHHhcChhhhhhccccceEEE-hhhhhcCccccccccccCCCCEEEEEcCCCC-
Confidence 11 1122222 22 333333321 1123334 8999999887654 2267899999999886
Q ss_pred EEEE---EeCCCCeEEEEcccCCCcC---C-----CC------CchHHHHHHHHHHhcch
Q 007533 506 MEIV---ELPNHPYFIGVQFHPEYKS---R-----PG------KPSPLFLGLIAAACGQL 548 (599)
Q Consensus 506 vE~i---E~~~hpffvGvQFHPE~ss---~-----p~------~p~pLF~~Fv~aa~~~~ 548 (599)
+|++ ++++.| ++|||||||++. + |+ ...+||.+|+++|.+..
T Consensus 222 ve~i~~i~~~~~~-i~GVQfHPE~~~~e~~~~~~~p~s~~a~~~~~~lf~~Fv~~a~~~~ 280 (315)
T 1l9x_A 222 IEFISTMEGYKYP-VYGVQWHPEKAPYEWKNLDGISHAPNAVKTAFYLAEFFVNEARKNN 280 (315)
T ss_dssp CEEEEEEEESSSC-EEEESSCTTHHHHCCSSCTTCCCCHHHHHHHHHHHHHHHHHHTTSC
T ss_pred EEEEEEeccCCCC-EEEEEeCCCCCcccccccccCCccHHHHHHHHHHHHHHHHHHHhcc
Confidence 6666 566667 679999999975 1 22 23499999999997644
No 16
>3uow_A GMP synthetase; structural genomics consortium, SGC, purine nucleotide biosy process, ligase; HET: XMP; 2.72A {Plasmodium falciparum}
Probab=99.89 E-value=4.6e-23 Score=229.80 Aligned_cols=212 Identities=19% Similarity=0.285 Sum_probs=144.0
Q ss_pred eEEEEEeecCCCcchHH-HHHHHHHHcCCcceeeeEEEEecCCCCCCccccCCchhhhHHHHhc--cCCCEEEeCCCCCC
Q 007533 296 VRIAMVGKYTGLSDAYL-SILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLL--KGADGILVPGGFGN 372 (599)
Q Consensus 296 v~IaiVGkY~~l~DaY~-SIi~AL~haG~~~~v~v~i~wi~s~~le~~~~~~~p~~y~~a~~~L--~~~DGIlVPGGfG~ 372 (599)
-+|+|+ ||++ .|. +|.++|+.+|+.+.+ .+.+ .++ +.+ .++|||||||||++
T Consensus 8 ~~Ilil-D~Gs---~~~~~I~r~lre~Gv~~ei----v~~~-~~~----------------~~i~~~~~dgIIlsGGp~s 62 (556)
T 3uow_A 8 DKILVL-NFGS---QYFHLIVKRLNNIKIFSET----KDYG-VEL----------------KDIKDMNIKGVILSGGPYS 62 (556)
T ss_dssp CEEEEE-ESSC---TTHHHHHHHHHHTTCCEEE----EETT-CCG----------------GGTTTSCEEEEEECCCSCC
T ss_pred CEEEEE-ECCC---ccHHHHHHHHHHCCCeEEE----EECC-CCH----------------HHHhhcCCCEEEECCCCCc
Confidence 579999 5874 455 899999999988744 2322 111 122 37899999999988
Q ss_pred CchhH----HHHHHHHHHHcCCCEEEEehhHHHHHHHhccccccccCCCccccC-------CCC---CCCeeeeCCCCCc
Q 007533 373 RGVQG----KILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFD-------PNT---KNPCVIFMPEGSK 438 (599)
Q Consensus 373 rg~eg----~i~aik~are~~iP~LGICLGmQll~iefgr~Vlgl~dA~S~Ef~-------~~~---~~~vi~~mpe~~~ 438 (599)
+..++ ...+++++.+.++|+||||+|||+|+.++|++|.... +.|+. +.. .+|++..|++..
T Consensus 63 ~~~~~~~~~~~~l~~~a~~~g~PvLGIC~G~QlLa~~lGG~V~~~~---~~E~G~~~l~~~~~~~~~~~p~v~~~~~~~- 138 (556)
T 3uow_A 63 VTEAGSPHLKKEVFEYFLEKKIPIFGICYGMQEIAVQMNGEVKKSK---TSEYGCTDVNILRNDNINNITYCRNFGDSS- 138 (556)
T ss_dssp TTSTTCCCCCHHHHHHHHHTTCCEEEETHHHHHHHHHTTCEEEEEE---EEEEEEEEEEECCTTGGGGCSGGGGC---C-
T ss_pred ccccCCcchhHHHHHHhhhcCCCEEEECHHHHHHHHHhCCcEecCC---CcccCCcceeeccCcccccccceecccccc-
Confidence 64433 2345677788899999999999999999999885432 22322 111 245566665432
Q ss_pred CcCCCccccCceeeEEecCCchhhhccCCceeEEeeeeeeeeeCchhhhhhccCCeEEEEEeCCCCeEEEEEeCCCCeEE
Q 007533 439 THMGGTMRLGSRRTYFQIKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFI 518 (599)
Q Consensus 439 ~~~GgtmrLG~~~v~l~~~~s~l~~iyg~~~~I~erHrHrYeVnp~~v~~le~~Gl~~sa~s~dg~~vE~iE~~~hpffv 518 (599)
+||||. ...+.+...++++..+++. ....++.|++.|. .+ +.|+.++|.++++. +++++++++++ +
T Consensus 139 ~~mg~~----~n~~~~~~~~~Lf~gl~~~--~~~v~~~H~d~V~-----~l-p~g~~vlA~s~~~~-i~ai~~~~~~i-~ 204 (556)
T 3uow_A 139 SAMDLY----SNYKLMNETCCLFENIKSD--ITTVWMNHNDEVT-----KI-PENFYLVSSSENCL-ICSIYNKEYNI-Y 204 (556)
T ss_dssp CHHHHH----TTSCCCC--CGGGTTCCSS--EEEEEEEEEEEEE-----EC-CTTCEEEEEETTEE-EEEEEETTTTE-E
T ss_pred cccccc----cccccccccchhhcccccC--ceEEEEEccceee-----cc-CCCcEEEEEeCCCC-EEEEEECCCCE-E
Confidence 455552 1222222232566666432 3445677887763 23 77999999998885 99999998885 6
Q ss_pred EEcccCCCcCCCCCchHHHHHHHHHHhcchhhh
Q 007533 519 GVQFHPEYKSRPGKPSPLFLGLIAAACGQLDTL 551 (599)
Q Consensus 519 GvQFHPE~ss~p~~p~pLF~~Fv~aa~~~~~~~ 551 (599)
|+|||||++.+| .+.++|++|+..++++..+|
T Consensus 205 GvQFHPE~~~~~-~G~~ll~nFl~~i~g~~~~~ 236 (556)
T 3uow_A 205 GVQYHPEVYESL-DGELMFYNFAYNICKCKKQF 236 (556)
T ss_dssp EESSCTTSTTST-THHHHHHHHHTTTTCCCC-C
T ss_pred EEEcCCCCCccc-cchHHHHHHHHHhhcccccc
Confidence 999999999887 58999999997777654433
No 17
>2ywj_A Glutamine amidotransferase subunit PDXT; uncharacterized conserved protein, structural genomics; 1.90A {Methanocaldococcus jannaschii}
Probab=99.89 E-value=4.8e-23 Score=197.41 Aligned_cols=183 Identities=16% Similarity=0.206 Sum_probs=115.0
Q ss_pred eEEEEEeecCCCcchHHHHHHHHHHcCCcceeeeEEEEecCCCCCCccccCCchhhhHHHHhccCCCEEEeCCCCCCCch
Q 007533 296 VRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRGV 375 (599)
Q Consensus 296 v~IaiVGkY~~l~DaY~SIi~AL~haG~~~~v~v~i~wi~s~~le~~~~~~~p~~y~~a~~~L~~~DGIlVPGGfG~rg~ 375 (599)
+||+|++- .++|.+++++|+.+|+.+.+ ++.. +.+.++|||++|||+++...
T Consensus 1 m~i~vl~~----~g~~~~~~~~l~~~G~~~~~------~~~~------------------~~~~~~dglil~GG~~~~~~ 52 (186)
T 2ywj_A 1 MIIGVLAI----QGDVEEHEEAIKKAGYEAKK------VKRV------------------EDLEGIDALIIPGGESTAIG 52 (186)
T ss_dssp CEEEEECS----SSCCHHHHHHHHHTTSEEEE------ECSG------------------GGGTTCSEEEECCSCHHHHH
T ss_pred CEEEEEec----CcchHHHHHHHHHCCCEEEE------ECCh------------------HHhccCCEEEECCCCchhhh
Confidence 58999952 45899999999999986532 3221 24678899999999875421
Q ss_pred hH--HHHHHHHHHHcCCCEEEEehhHHHHHHHhccccccccCCCccccCCCCCCCeeeeCCCCCcCcCCCccccCceeeE
Q 007533 376 QG--KILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMRLGSRRTY 453 (599)
Q Consensus 376 eg--~i~aik~are~~iP~LGICLGmQll~iefgr~Vlgl~dA~S~Ef~~~~~~~vi~~mpe~~~~~~GgtmrLG~~~v~ 453 (599)
+. ....++..+++++|+||||+|||+|+.++|+++-++.- + +.. +..+ . .|.. ...+..
T Consensus 53 ~~~~~~~~~~~i~~~~~PilGIC~G~Qll~~~~gg~~~~lg~-----~----~~~-~~~~-----~-~~~~--~~~~~~- 113 (186)
T 2ywj_A 53 KLMKKYGLLEKIKNSNLPILGTCAGMVLLSKGTGINQILLEL-----M----DIT-VKRN-----A-YGRQ--VDSFEK- 113 (186)
T ss_dssp HHHHHTTHHHHHHTCCCCEEEETHHHHHHSSCCSSCCCCCCC-----S----SEE-EETT-----T-TCSS--SCCEEE-
T ss_pred hhhhccCHHHHHHhcCCcEEEECHHHHHHHHHhCCCcCccCC-----C----cee-EEec-----c-CCCc--ccceec-
Confidence 10 11123344478999999999999999998876422110 0 000 0000 0 0110 111111
Q ss_pred EecCCchhhhccCCceeEEeeeeeeeeeCchhhhhhccCCeEEEEEeCCCCeEEEEEeCCCCeEEEEcccCCCcCCCCCc
Q 007533 454 FQIKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKP 533 (599)
Q Consensus 454 l~~~~s~l~~iyg~~~~I~erHrHrYeVnp~~v~~le~~Gl~~sa~s~dg~~vE~iE~~~hpffvGvQFHPE~ss~p~~p 533 (599)
+ .++..+ ..+..++.|+|.|+ .+++.+++++|++ ++. +|+++++ +++|+|||||+++ ++
T Consensus 114 ---~-~~~~~~----~~~~~~~~H~~~v~-----~l~~~~~~v~a~s-d~~-~~a~~~~---~~~gvQfHPE~~~---~g 172 (186)
T 2ywj_A 114 ---E-IEFKDL----GKVYGVFIRAPVVD-----KILSDDVEVIARD-GDK-IVGVKQG---KYMALSFHPELSE---DG 172 (186)
T ss_dssp ---E-EEETTT----EEEEEEESSCCEEE-----EECCTTCEEEEEE-TTE-EEEEEET---TEEEESSCGGGST---TH
T ss_pred ---c-cccccC----CcEEEEEEecceee-----ecCCCCeEEEEEE-CCE-EEEEeeC---CEEEEECCCCcCC---ch
Confidence 1 122222 22334566777764 2225789999998 654 9999864 4789999999876 36
Q ss_pred hHHHHHHHHHHhc
Q 007533 534 SPLFLGLIAAACG 546 (599)
Q Consensus 534 ~pLF~~Fv~aa~~ 546 (599)
.++|++|+++|.+
T Consensus 173 ~~l~~~F~~~~~~ 185 (186)
T 2ywj_A 173 YKVYKYFVENCVK 185 (186)
T ss_dssp HHHHHHHHHHHTC
T ss_pred hHHHHHHHHHHhh
Confidence 8999999998854
No 18
>3tqi_A GMP synthase [glutamine-hydrolyzing]; ligase; 2.84A {Coxiella burnetii}
Probab=99.88 E-value=4.3e-23 Score=228.71 Aligned_cols=195 Identities=19% Similarity=0.280 Sum_probs=132.5
Q ss_pred ceEEEEEeecCCCcchHH-HHHHHHHHcCCcceeeeEEEE-ecCCCCCCccccCCchhhhHHHHhccCCCEEEeCCCCCC
Q 007533 295 PVRIAMVGKYTGLSDAYL-SILKALLHASVDLRKKLVIDW-IPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGN 372 (599)
Q Consensus 295 ~v~IaiVGkY~~l~DaY~-SIi~AL~haG~~~~v~v~i~w-i~s~~le~~~~~~~p~~y~~a~~~L~~~DGIlVPGGfG~ 372 (599)
..+|+|+ ||++ .|. ++.++|+.+|+.+.+. .| .+.+++ .-.++|||||||||++
T Consensus 10 ~~~I~Il-D~g~---~~~~~i~r~lr~~Gv~~~i~---p~~~~~~~i-----------------~~~~~dgIILsGGp~s 65 (527)
T 3tqi_A 10 QHRILIL-DFGS---QYAQLIARRVREIGVYCELM---PCDIDEETI-----------------RDFNPHGIILSGGPET 65 (527)
T ss_dssp CSEEEEE-ECSC---TTHHHHHHHHHHHTCEEEEE---ETTCCSSSS-----------------TTTCCSEEEECCCCC-
T ss_pred CCeEEEE-ECCC---ccHHHHHHHHHHCCCeEEEE---ECCCCHHHH-----------------HhcCCCEEEECCcCcc
Confidence 3589999 5764 454 8999999999887541 11 111111 0126799999999998
Q ss_pred CchhHHHHHHHHHHHcCCCEEEEehhHHHHHHHhccccccccCCCccccCCCCCCCeeeeCCCCCcCcCCCccccCceee
Q 007533 373 RGVQGKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMRLGSRRT 452 (599)
Q Consensus 373 rg~eg~i~aik~are~~iP~LGICLGmQll~iefgr~Vlgl~dA~S~Ef~~~~~~~vi~~mpe~~~~~~GgtmrLG~~~v 452 (599)
...++...+.+.+.+.++|+||||+|||+|+.++|++|.... . .+ +|.+.+
T Consensus 66 v~~~~~~~~~~~~~~~~~PvLGIC~G~Qlla~~lGG~V~~~~---~--------------------~e------~G~~~v 116 (527)
T 3tqi_A 66 VTLSHTLRAPAFIFEIGCPVLGICYGMQTMAYQLGGKVNRTA---K--------------------AE------FGHAQL 116 (527)
T ss_dssp --------CCCSTTTSSSCEEEETHHHHHHHHHSSSCBC----------------------------C------EEEEEE
T ss_pred cccCCChhhHHHHHhcCCCEEEEChHHHHHHHHcCCeEEeCC---C--------------------cc------ccceEE
Confidence 765565666677778899999999999999999999884321 0 12 234556
Q ss_pred EEecCCchhhhccCC-----ceeEEeeeeeeeeeCchhhhhhccCCeEEEEEeCCCCeEEEEEeCCCCeEEEEcccCCCc
Q 007533 453 YFQIKDCKSAKLYGN-----RTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYK 527 (599)
Q Consensus 453 ~l~~~~s~l~~iyg~-----~~~I~erHrHrYeVnp~~v~~le~~Gl~~sa~s~dg~~vE~iE~~~hpffvGvQFHPE~s 527 (599)
.+.+++.++..+... ......++.|+|.|. .+ +.|++++|.++++. +++++++++|+ +|+|||||++
T Consensus 117 ~~~~~~~l~~~l~~~~~~~~~~~~~v~~~H~d~v~-----~l-p~g~~v~A~s~~~~-i~ai~~~~~~~-~GvQFHPE~~ 188 (527)
T 3tqi_A 117 RVLNPAFLFDGIEDQVSPQGEPLLDVWMSHGDIVS-----EL-PPGFEATACTDNSP-LAAMADFKRRF-FGLQFHPEVT 188 (527)
T ss_dssp EESSCTTTTSSCCSBCCTTSCCEEEEEEESSSCBC-----SC-CTTCEEEEEETTEE-EEEEECSSSCE-EEESBCSSST
T ss_pred EEcCCChhhcCCccccccccccceEEEEEcccchh-----cc-CCCCEEEEEeCCCc-EEEEEcCCCCE-EEEEeccccc
Confidence 665543455555421 113456777887763 34 78999999998765 99999999995 5999999999
Q ss_pred CCCCCchHHHHHHHHHHhcchhhh
Q 007533 528 SRPGKPSPLFLGLIAAACGQLDTL 551 (599)
Q Consensus 528 s~p~~p~pLF~~Fv~aa~~~~~~~ 551 (599)
.++ .+..+|.+|+..++++...|
T Consensus 189 ~t~-~G~~ll~nF~~~i~~~~~~w 211 (527)
T 3tqi_A 189 HTP-QGHRILAHFVIHICQCIPNW 211 (527)
T ss_dssp TST-THHHHHHHHHHTTSCCCCCC
T ss_pred ccc-ccchhhhhhhhhcccccchh
Confidence 887 47899999998777655444
No 19
>3r75_A Anthranilate/para-aminobenzoate synthases compone; ammonia channel, chorismate, type 1 glutamine amidotransfera phenazine biosynthesis, lyase; HET: CYG; 2.10A {Burkholderia SP} PDB: 3r74_A* 3r76_A*
Probab=99.88 E-value=1.1e-22 Score=230.13 Aligned_cols=181 Identities=14% Similarity=0.144 Sum_probs=127.9
Q ss_pred ceEEEEEeecCCCcchH-HHHHHHHHHcCCcceeeeEEEEecCCCCCCccccCCchhhhHHHHhccCCCEEEeCCCCCCC
Q 007533 295 PVRIAMVGKYTGLSDAY-LSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNR 373 (599)
Q Consensus 295 ~v~IaiVGkY~~l~DaY-~SIi~AL~haG~~~~v~v~i~wi~s~~le~~~~~~~p~~y~~a~~~L~~~DGIlVPGGfG~r 373 (599)
..+|+|++.|. +| .++.++|+..|+.+.+ .+.+.. ..+.++|||||+||+|++
T Consensus 446 Gk~IlviD~gd----sf~~~l~~~l~~~G~~v~V----v~~d~~------------------~~~~~~DgIIlsGGPg~p 499 (645)
T 3r75_A 446 GCRALIVDAED----HFTAMIAQQLSSLGLATEV----CGVHDA------------------VDLARYDVVVMGPGPGDP 499 (645)
T ss_dssp TCEEEEEESSC----THHHHHHHHHHHTTCEEEE----EETTCC------------------CCGGGCSEEEECCCSSCT
T ss_pred CCEEEEEECCc----cHHHHHHHHHHHCCCEEEE----EECCCc------------------ccccCCCEEEECCCCCCh
Confidence 46899996444 44 4899999999976543 343321 124578999999999987
Q ss_pred chhH------HHHHHHHHHHcCCCEEEEehhHHHHHHHhccccccccCCCccccCCCCCCCeeeeCCCCCcCcCCCcccc
Q 007533 374 GVQG------KILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMRL 447 (599)
Q Consensus 374 g~eg------~i~aik~are~~iP~LGICLGmQll~iefgr~Vlgl~dA~S~Ef~~~~~~~vi~~mpe~~~~~~GgtmrL 447 (599)
...+ +..+++++++.++|+||||+|||+|+.++|++|...+. ++.|+
T Consensus 500 ~d~~~p~i~~~~~lI~~a~~~~iPiLGIClG~QlLa~alGG~V~~~~~-----------------------~~~G~---- 552 (645)
T 3r75_A 500 SDAGDPRIARLYAWLRHLIDEGKPFMAVCLSHQILNAILGIPLVRREV-----------------------PNQGI---- 552 (645)
T ss_dssp TCTTSHHHHHHHHHHHHHHHHTCCEEEETHHHHHHHHHTTCCEEEEEE-----------------------EEEEE----
T ss_pred hhhhhhhHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHhCCEEEcCCC-----------------------ccccc----
Confidence 6433 67889999999999999999999999999999864321 23343
Q ss_pred CceeeEEecCCchhhhccCCceeEEeeeeeeeeeCc--hh-hhhhccCCeEEEEEeCCCCeEEEEEeCCCCeEEEEcccC
Q 007533 448 GSRRTYFQIKDCKSAKLYGNRTFIDERHRHRYEVNP--DM-IARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHP 524 (599)
Q Consensus 448 G~~~v~l~~~~s~l~~iyg~~~~I~erHrHrYeVnp--~~-v~~le~~Gl~~sa~s~dg~~vE~iE~~~hpffvGvQFHP 524 (599)
.+++.+... +++..+| |+|.++. +. ...+ +.|++++|.++++. ++++++++ ++||||||
T Consensus 553 -~~~i~~~~~-~l~~~~~-----------~~~~v~~~h~~~~~~l-p~g~~v~A~s~dg~-i~Ai~~~~---~~GVQFHP 614 (645)
T 3r75_A 553 -QVEIDLFGQ-RERVGFY-----------NTYVAQTVRDEMDVDG-VGTVAISRDPRTGE-VHALRGPT---FSSMQFHA 614 (645)
T ss_dssp -EEEEEETTE-EEEEEEE-----------EEEEEBCSCSEEEETT-TEEEEEEECTTTCB-EEEEEETT---EEEESSBT
T ss_pred -ceEEeeecC-cceecCC-----------CcEEEEEehhhccccC-CCCeEEEEEcCCCc-EEEEEcCC---EEEEEeCC
Confidence 233333221 2333333 3343321 11 2223 67999999998886 99999875 47999999
Q ss_pred CCcCCCCCchHHHHHHHHHHhcc
Q 007533 525 EYKSRPGKPSPLFLGLIAAACGQ 547 (599)
Q Consensus 525 E~ss~p~~p~pLF~~Fv~aa~~~ 547 (599)
|+..++. +++||.+|++++...
T Consensus 615 E~~~t~~-G~~Ll~nFl~~~~~~ 636 (645)
T 3r75_A 615 ESVLTVD-GPRILGEAITHAIRR 636 (645)
T ss_dssp TSTTCTT-HHHHHHHHHHHHTTT
T ss_pred eecCCcc-hHHHHHHHHHHHHhc
Confidence 9988774 899999999998653
No 20
>1i1q_B Anthranilate synthase component II; tryptophan biosynthesis, lyase; HET: TRP; 1.90A {Salmonella typhimurium} SCOP: c.23.16.1 PDB: 1i7q_B 1i7s_B*
Probab=99.88 E-value=1.3e-21 Score=188.90 Aligned_cols=189 Identities=17% Similarity=0.155 Sum_probs=118.3
Q ss_pred eEEEEEeecCCCcchHHHHHHHHHHcCCcceeeeEEEEecCCCCCCccccCCchhhhHHHHhcc--CCCEEEeCCCCCCC
Q 007533 296 VRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLK--GADGILVPGGFGNR 373 (599)
Q Consensus 296 v~IaiVGkY~~l~DaY~SIi~AL~haG~~~~v~v~i~wi~s~~le~~~~~~~p~~y~~a~~~L~--~~DGIlVPGGfG~r 373 (599)
++|+||+.|++. -.++.++|+.+|+++.+ .+.+. +++ ++.+.+. +.|++|++||+|++
T Consensus 1 ~~i~iiDn~~s~---~~~i~~~l~~~G~~~~v----~~~~~-~~~------------~i~~~l~~~~~~~iil~gGpg~~ 60 (192)
T 1i1q_B 1 ADILLLDNIDSF---TWNLADQLRTNGHNVVI----YRNHI-PAQ------------TLIDRLATMKNPVLMLSPGPGVP 60 (192)
T ss_dssp CEEEEEECSCSS---HHHHHHHHHHTTCEEEE----EETTS-CSH------------HHHHHHTTCSSEEEEECCCSSCG
T ss_pred CcEEEEECCccH---HHHHHHHHHHCCCeEEE----EECCC-CHH------------HHHHHhhhccCCeEEECCCCcCc
Confidence 479999756532 24789999999977643 12221 111 1112222 34579999999997
Q ss_pred chhHHHHHHHHHHHcCCCEEEEehhHHHHHHHhccccccccCCCccccCCCCCCCeeeeCCCCCcCcCCCccccCceeeE
Q 007533 374 GVQGKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMRLGSRRTY 453 (599)
Q Consensus 374 g~eg~i~aik~are~~iP~LGICLGmQll~iefgr~Vlgl~dA~S~Ef~~~~~~~vi~~mpe~~~~~~GgtmrLG~~~v~ 453 (599)
...+....+..+.+.++|+||||+|||+|+.++|+++..... ...|. ....
T Consensus 61 ~~~~~~~~l~~~~~~~~PilGIC~G~Qll~~~~Gg~v~~~~~-----------------------~~~g~------~~~~ 111 (192)
T 1i1q_B 61 SEAGCMPELLTRLRGKLPIIGICLGHQAIVEAYGGYVGQAGE-----------------------ILHGK------ATSI 111 (192)
T ss_dssp GGSTTHHHHHHHHBTTBCEEEETHHHHHHHHHTSCCCCC--------------------------CCSSE------EEEE
T ss_pred hhCchHHHHHHHHhcCCCEEEECcChHHHHHHhCCEEEeCCC-----------------------cEecc------eeEE
Confidence 554433333334567899999999999999999887643210 01121 1111
Q ss_pred EecCCchhhhccCCceeEEeeeeeeeeeCchhhhhhccCCeEEEEEeCCCCeEEEEEeCCCCeEEEEcccCCCcCCCCCc
Q 007533 454 FQIKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKP 533 (599)
Q Consensus 454 l~~~~s~l~~iyg~~~~I~erHrHrYeVnp~~v~~le~~Gl~~sa~s~dg~~vE~iE~~~hpffvGvQFHPE~ss~p~~p 533 (599)
....++++..+- . .....+.|+|.+. .+ +.|++++|.+ ++ .++++++++.| ++|+|||||++..+ .+
T Consensus 112 ~~~~~~l~~~~~-~--~~~v~~~H~~~v~-----~l-p~~~~v~a~~-~~-~~~ai~~~~~~-~~gvQfHPE~~~~~-~g 178 (192)
T 1i1q_B 112 EHDGQAMFAGLA-N--PLPVARYHSLVGS-----NV-PAGLTINAHF-NG-MVMAVRHDADR-VCGFQFHPESILTT-QG 178 (192)
T ss_dssp EECCCGGGTTSC-S--SEEEEECCC---C-----CC-CTTCEEEEEE-TT-EEEEEEETTTT-EEEESSBTTSTTCT-TH
T ss_pred ecCCChHHhcCC-C--CcEEEechhhHhh-----hC-CCccEEEECC-CC-cEEEEEECCCC-EEEEEccCcccCCc-cc
Confidence 122224444442 2 2345677887653 33 6788898854 45 49999999888 56999999998765 47
Q ss_pred hHHHHHHHHHHhc
Q 007533 534 SPLFLGLIAAACG 546 (599)
Q Consensus 534 ~pLF~~Fv~aa~~ 546 (599)
..+|++|++.+..
T Consensus 179 ~~il~nf~~~~~~ 191 (192)
T 1i1q_B 179 ARLLEQTLAWAQQ 191 (192)
T ss_dssp HHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHhc
Confidence 8999999987643
No 21
>1o1y_A Conserved hypothetical protein TM1158; flavodoxin-like fold, structural genomics, joint center for structural genomics, JCSG; 1.70A {Thermotoga maritima} SCOP: c.23.16.1
Probab=99.87 E-value=1.2e-21 Score=196.38 Aligned_cols=189 Identities=16% Similarity=0.116 Sum_probs=128.6
Q ss_pred hcCCCCceEEEEEeecCCCcchHHHHHHHHHHcCCcceeeeEEEEecC-CCCCCccccCCchhhhHHHHhccCCCEEEeC
Q 007533 289 CDGLHEPVRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPA-CDLEDATEKENPDAYKAAWKLLKGADGILVP 367 (599)
Q Consensus 289 ~~~~~~~v~IaiVGkY~~l~DaY~SIi~AL~haG~~~~v~v~i~wi~s-~~le~~~~~~~p~~y~~a~~~L~~~DGIlVP 367 (599)
+..-...++|.++-.+... .-.++.++|+..|+++.+ ...+. +.+ | +.+.++||||+|
T Consensus 6 ~~~~~~~~~~~~i~~~~~~--~~~~i~~~l~~~G~~v~v----~~~~~~~~~--------~-------~~l~~~Dglil~ 64 (239)
T 1o1y_A 6 IHHHHHHVRVLAIRHVEIE--DLGMMEDIFREKNWSFDY----LDTPKGEKL--------E-------RPLEEYSLVVLL 64 (239)
T ss_dssp ----CCCCEEEEECSSTTS--SCTHHHHHHHHTTCEEEE----ECGGGTCCC--------S-------SCGGGCSEEEEC
T ss_pred cccccceeEEEEEECCCCC--CchHHHHHHHhCCCcEEE----eCCcCcccc--------c-------cchhcCCEEEEC
Confidence 3344567899999544322 344788899999977642 12221 111 1 346789999999
Q ss_pred CCCCCCc-------hhHHHHHHHHHHHcCCCEEEEehhHHHHHHHhccccccccCCCccccCCCCCCCeeeeCCCCCcCc
Q 007533 368 GGFGNRG-------VQGKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTH 440 (599)
Q Consensus 368 GGfG~rg-------~eg~i~aik~are~~iP~LGICLGmQll~iefgr~Vlgl~dA~S~Ef~~~~~~~vi~~mpe~~~~~ 440 (599)
||+++.- ......+++++.++++|+||||+|||+|+.++|+++...+. -.+
T Consensus 65 GG~~~~~~~~~~~~l~~~~~~i~~~~~~~~PiLGIC~G~QlL~~alGG~v~~~~~----------------------g~~ 122 (239)
T 1o1y_A 65 GGYMGAYEEEKYPFLKYEFQLIEEILKKEIPFLGICLGSQMLAKVLGASVYRGKN----------------------GEE 122 (239)
T ss_dssp CCSCCTTCTTTCTHHHHHHHHHHHHHHHTCCEEEETHHHHHHHHHTTCCEEECTT----------------------CCE
T ss_pred CCCccccCCccChhHHHHHHHHHHHHHCCCCEEEEchhHHHHHHHcCCeEecCCC----------------------CCc
Confidence 9986531 23578899999999999999999999999999988754210 012
Q ss_pred CCCccccCceeeEEecCCchhhhccCCceeEEeeeeeeeeeCchhhhhhccCCeEEEEEeCCCCeEEEEEeCCCCeEEEE
Q 007533 441 MGGTMRLGSRRTYFQIKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGV 520 (599)
Q Consensus 441 ~GgtmrLG~~~v~l~~~~s~l~~iyg~~~~I~erHrHrYeVnp~~v~~le~~Gl~~sa~s~dg~~vE~iE~~~hpffvGv 520 (599)
.|.+++...++ +.+.+.++. .+..+|.|+|.+ .+ +.++.++|.++++. +|++++++ ++|+
T Consensus 123 ------~G~~~v~~~~~-~~l~~~~~~--~~~~~~~H~~~v------~l-p~~~~vlA~s~~~~-iea~~~~~---i~gv 182 (239)
T 1o1y_A 123 ------IGWYFVEKVSD-NKFFREFPD--RLRVFQWHGDTF------DL-PRRATRVFTSEKYE-NQGFVYGK---AVGL 182 (239)
T ss_dssp ------EEEEEEEECCC-CGGGTTSCS--EEEEEEEESEEE------CC-CTTCEEEEECSSCS-CSEEEETT---EEEE
T ss_pred ------cccEEEEECCC-CchHHhCCC--CceeEeecCCcc------cc-CCCCEEEEEcCCCC-EEEEEECC---EEEE
Confidence 23455655444 333333332 345678899887 23 67899999998876 89999985 6799
Q ss_pred cccCCCcCCCCCchHHHHHHHHHHhc
Q 007533 521 QFHPEYKSRPGKPSPLFLGLIAAACG 546 (599)
Q Consensus 521 QFHPE~ss~p~~p~pLF~~Fv~aa~~ 546 (599)
|||||++. .++.+|++....
T Consensus 183 QfHPE~~~------~~~~~~~~~~~~ 202 (239)
T 1o1y_A 183 QFHIEVGA------RTMKRWIEAYKD 202 (239)
T ss_dssp SSBSSCCH------HHHHHHHHHTHH
T ss_pred EeCccCCH------HHHHHHHHHhHH
Confidence 99999953 488888876544
No 22
>1gpm_A GMP synthetase, XMP aminase; class I glutamine amidotransferase, N-type ATP pyrophosphata transferase (glutamine amidotransferase); HET: AMP CIT; 2.20A {Escherichia coli} SCOP: c.23.16.1 c.26.2.1 d.52.2.1
Probab=99.87 E-value=1.6e-22 Score=224.04 Aligned_cols=191 Identities=17% Similarity=0.272 Sum_probs=129.8
Q ss_pred eEEEEEeecCCCcchHH-HHHHHHHHcCCcceeeeEEEEecCCCCCCccccCCchhhhHHHHhccCCCEEEeCCCCCCCc
Q 007533 296 VRIAMVGKYTGLSDAYL-SILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRG 374 (599)
Q Consensus 296 v~IaiVGkY~~l~DaY~-SIi~AL~haG~~~~v~v~i~wi~s~~le~~~~~~~p~~y~~a~~~L~~~DGIlVPGGfG~rg 374 (599)
.+|+|+ +|++ .|. ++.++|+.+|+.+.+ .+.+. +.+ ++ +.+ ++|||||||||++..
T Consensus 8 ~~IlIl-D~g~---~~~~~i~r~lr~~G~~~~i----~p~~~-~~~------------~i-~~~-~~dgiILsGGp~s~~ 64 (525)
T 1gpm_A 8 HRILIL-DFGS---QYTQLVARRVRELGVYCEL----WAWDV-TEA------------QI-RDF-NPSGIILSGGPESTT 64 (525)
T ss_dssp SEEEEE-ECSC---TTHHHHHHHHHHTTCEEEE----EESCC-CHH------------HH-HHH-CCSEEEECCCSSCTT
T ss_pred CEEEEE-ECCC---ccHHHHHHHHHHCCCEEEE----EECCC-CHH------------HH-hcc-CCCEEEECCcCcccc
Confidence 589999 5774 344 789999999987643 22221 110 01 112 679999999998753
Q ss_pred hhHHHHHHHHHHHcCCCEEEEehhHHHHHHHhccccccccCCCccccCCCCCCCeeeeCCCCCcCcCCCccccCceeeEE
Q 007533 375 VQGKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMRLGSRRTYF 454 (599)
Q Consensus 375 ~eg~i~aik~are~~iP~LGICLGmQll~iefgr~Vlgl~dA~S~Ef~~~~~~~vi~~mpe~~~~~~GgtmrLG~~~v~l 454 (599)
.++...+.+.+.+.++|+||||+|||+|+.++|++|.... . .+.| .+.+.+
T Consensus 65 ~~~~~~~~~~~~~~g~PvLGIC~G~Qlla~~~GG~V~~~~---~--------------------~e~G------~~~v~~ 115 (525)
T 1gpm_A 65 EENSPRAPQYVFEAGVPVFGVCYGMQTMAMQLGGHVEASN---E--------------------REFG------YAQVEV 115 (525)
T ss_dssp STTCCCCCGGGGTSSSCEEEETHHHHHHHHHHTCEEECCS---S--------------------CEEE------EEEEEE
T ss_pred ccCCcchHHHHHHCCCCEEEEChHHHHHHHHcCCEEEeCC---C--------------------cccc------eEEEEe
Confidence 3222222355667899999999999999999999985432 1 1223 344555
Q ss_pred ecCCchhhhccCCc------eeEEeeeeeeeeeCchhhhhhccCCeEEEEEeCCCCeEEEEEeCCCCeEEEEcccCCCcC
Q 007533 455 QIKDCKSAKLYGNR------TFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKS 528 (599)
Q Consensus 455 ~~~~s~l~~iyg~~------~~I~erHrHrYeVnp~~v~~le~~Gl~~sa~s~dg~~vE~iE~~~hpffvGvQFHPE~ss 528 (599)
.+++.++..+ +.. .....++.|+|.|. .+ +.|++++|.++++. ++++++++++ ++|+|||||++.
T Consensus 116 ~~~~~L~~~l-~~~~~~~~~~~~~v~~~H~~~V~-----~l-p~g~~v~A~s~~~~-i~ai~~~~~~-i~gvQFHPE~~~ 186 (525)
T 1gpm_A 116 VNDSALVRGI-EDALTADGKPLLDVWMSHGDKVT-----AI-PSDFITVASTESCP-FAIMANEEKR-FYGVQFHPEVTH 186 (525)
T ss_dssp CSCCTTTTTC-CSEECTTSCEEEEEEEEECSEEE-----EC-CTTCEEEEECSSCS-CSEEEETTTT-EEEESBCTTSTT
T ss_pred CCCCHhhccC-ccccccccccceEEEEEccceee-----eC-CCCCEEEEECCCCC-EEEEEECCCC-EEEEecCCCCCc
Confidence 4442334333 220 12334567777663 34 78999999998886 9999999888 569999999998
Q ss_pred CCCCchHHHHHHHHHHhcch
Q 007533 529 RPGKPSPLFLGLIAAACGQL 548 (599)
Q Consensus 529 ~p~~p~pLF~~Fv~aa~~~~ 548 (599)
+|. +..+|.+|+..++++.
T Consensus 187 ~~~-g~~ll~nF~~~i~~~~ 205 (525)
T 1gpm_A 187 TRQ-GMRMLERFVRDICQCE 205 (525)
T ss_dssp STT-HHHHHHHHHHTTSCCC
T ss_pred chh-HHHHHHHHHHhhhhcc
Confidence 874 8999999997665543
No 23
>3d54_D Phosphoribosylformylglycinamidine synthase 1; alpha-beta structure, ATP-binding, cytoplasm, ligase, nucleotide-binding, purine biosynthesis; HET: CYG ADP; 3.50A {Thermotoga maritima}
Probab=99.86 E-value=5.2e-21 Score=186.13 Aligned_cols=186 Identities=17% Similarity=0.156 Sum_probs=123.8
Q ss_pred eEEEEEeecCCCcchHHHHHHHHHHcCCcceeeeEEEEecCCCCCCccccCCchhhhHHHHhccCCCEEEeCCCCCCCc-
Q 007533 296 VRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRG- 374 (599)
Q Consensus 296 v~IaiVGkY~~l~DaY~SIi~AL~haG~~~~v~v~i~wi~s~~le~~~~~~~p~~y~~a~~~L~~~DGIlVPGGfG~rg- 374 (599)
++|+|+ .|.... ...++.++|+.+|+.+.+ +... +.+.++||||||||++...
T Consensus 3 ~~i~il-~~~~~~-~~~~~~~~l~~~g~~~~~------~~~~------------------~~~~~~d~lil~Gg~~~~~~ 56 (213)
T 3d54_D 3 PRACVV-VYPGSN-CDRDAYHALEINGFEPSY------VGLD------------------DKLDDYELIILPGGFSYGDY 56 (213)
T ss_dssp CEEEEE-CCTTEE-EHHHHHHHHHTTTCEEEE------ECTT------------------CCCSSCSEEEECEECGGGGC
T ss_pred cEEEEE-EcCCCC-ccHHHHHHHHHCCCEEEE------EecC------------------CCcccCCEEEECCCCchhhh
Confidence 589999 465432 235789999999876533 2221 1356889999999965321
Q ss_pred --------hhHHHHHHHHHHHcCCCEEEEehhHHHHHHH--hccccccccCCCccccCCCCCCCeeeeCCCCCcCcCCCc
Q 007533 375 --------VQGKILAAKYAREHRIPYLGICLGMQVAVIE--FARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGT 444 (599)
Q Consensus 375 --------~eg~i~aik~are~~iP~LGICLGmQll~ie--fgr~Vlgl~dA~S~Ef~~~~~~~vi~~mpe~~~~~~Ggt 444 (599)
......+++.+.++++|+||||+|||+|+.+ +++++... +. ...+.|
T Consensus 57 ~~~~~~~~~~~~~~~l~~~~~~~~pilgIC~G~qlLa~aGll~g~v~~~--------------------~~-~~~~~g-- 113 (213)
T 3d54_D 57 LRPGAVAAREKIAFEIAKAAERGKLIMGICNGFQILIEMGLLKGALLQN--------------------SS-GKFICK-- 113 (213)
T ss_dssp SSTTHHHHTSTTHHHHHHHHHHTCEEEECHHHHHHHHHHTSSCSEEECC--------------------SS-SSCBCC--
T ss_pred hccccccccHHHHHHHHHHHHCCCEEEEECHHHHHHHHcCCCCCCeecC--------------------CC-CceEee--
Confidence 1346788888888999999999999999987 44444211 00 001333
Q ss_pred cccCceeeEEe-cCCchhhhccCCceeEEeeeee---eeeeCchhhhhhccCCeEEEEEeCC--C--CeEEEEEeCCCCe
Q 007533 445 MRLGSRRTYFQ-IKDCKSAKLYGNRTFIDERHRH---RYEVNPDMIARLENAGLSFTGKDET--S--QRMEIVELPNHPY 516 (599)
Q Consensus 445 mrLG~~~v~l~-~~~s~l~~iyg~~~~I~erHrH---rYeVnp~~v~~le~~Gl~~sa~s~d--g--~~vE~iE~~~hpf 516 (599)
.+.+.+. ++ +.+.+.++....+.....| +|.+.| .++.++|++++ | ..+|++++++.+
T Consensus 114 ----~~~v~~~~~~-~~l~~~~~~~~~~~~~~~H~~~s~~~~~--------~~~~~~a~~~~~ng~~~~i~a~~~~~~~- 179 (213)
T 3d54_D 114 ----WVDLIVENND-TPFTNAFEKGEKIRIPIAHGFGRYVKID--------DVNVVLRYVKDVNGSDERIAGVLNESGN- 179 (213)
T ss_dssp ----EEEEEECCCS-STTSTTSCTTCEEEEECCBSSCEEECSS--------CCEEEEEESSCSSCCGGGEEEEECSSSC-
T ss_pred ----eEEEEeCCCC-CceeeccCCCCEEEEEeecCceEEEecC--------CCcEEEEEcCCCCCCccceeEEEcCCCC-
Confidence 3556665 34 3343333322234332345 888753 47888898766 6 459999997666
Q ss_pred EEEEcccCCCcCCC----CCchHHHHHHHHHH
Q 007533 517 FIGVQFHPEYKSRP----GKPSPLFLGLIAAA 544 (599)
Q Consensus 517 fvGvQFHPE~ss~p----~~p~pLF~~Fv~aa 544 (599)
++|+|||||++... .....||++|++++
T Consensus 180 ~~gvQfHPE~~~~~~~~~~~g~~l~~~f~~~~ 211 (213)
T 3d54_D 180 VFGLMPHPERAVEELIGGEDGKKVFQSILNYL 211 (213)
T ss_dssp EEEECSCSTTTTSTTTTCSTTSHHHHHHHHHC
T ss_pred EEEEeCCHHHhcCHhhhcCccHHHHHHHHHHh
Confidence 67999999999842 45689999999876
No 24
>1gpw_B Amidotransferase HISH; lyase/transferase, complex (lyase/transferase), histidine biosynthesis, glutaminase, glutamine amidotransferase; 2.4A {Thermotoga maritima} SCOP: c.23.16.1 PDB: 1k9v_F 1kxj_A 2wjz_B
Probab=99.85 E-value=8e-22 Score=191.15 Aligned_cols=184 Identities=21% Similarity=0.243 Sum_probs=116.7
Q ss_pred eEEEEEeecCCCcchHHHHHHHHHHcC-----CcceeeeEEEEecCCCCCCccccCCchhhhHHHHhccCCCEEEeCCCC
Q 007533 296 VRIAMVGKYTGLSDAYLSILKALLHAS-----VDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGF 370 (599)
Q Consensus 296 v~IaiVGkY~~l~DaY~SIi~AL~haG-----~~~~v~v~i~wi~s~~le~~~~~~~p~~y~~a~~~L~~~DGIlVPGGf 370 (599)
++|+|+ +|+.. +|.|+.++|+.+| +++.+ +... +. .++||||||||
T Consensus 1 m~I~ii-d~~~g--~~~s~~~~l~~~G~~~~~~~~~~------~~~~------------------~~-~~~dglilpG~- 51 (201)
T 1gpw_B 1 MRIGII-SVGPG--NIMNLYRGVKRASENFEDVSIEL------VESP------------------RN-DLYDLLFIPGV- 51 (201)
T ss_dssp CEEEEE-CCSSS--CCHHHHHHHHHHSTTBSSCEEEE------ECSC------------------CS-SCCSEEEECCC-
T ss_pred CEEEEE-ecCCc--hHHHHHHHHHHcCCCCCceEEEE------ECCC------------------cc-cCCCEEEECCC-
Confidence 589999 58633 6789999999998 55432 3221 12 57899999885
Q ss_pred CCCchh-------HHHHHHHHHHHcCCCEEEEehhHHHHHHHhc--cccccccCCCccccCCCCCCCeeeeCCCCCcCcC
Q 007533 371 GNRGVQ-------GKILAAKYAREHRIPYLGICLGMQVAVIEFA--RSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHM 441 (599)
Q Consensus 371 G~rg~e-------g~i~aik~are~~iP~LGICLGmQll~iefg--r~Vlgl~dA~S~Ef~~~~~~~vi~~mpe~~~~~~ 441 (599)
|+.+.. +...+++.+.+.++|+||||+|||+|+.+++ ++.-++.- + ... +..++....+++
T Consensus 52 g~~~~~~~~l~~~~~~~~i~~~~~~~~PilGIC~G~Qll~~~~g~~G~~~~l~~-----~----~g~-v~~~~~~~~~~~ 121 (201)
T 1gpw_B 52 GHFGEGMRRLRENDLIDFVRKHVEDERYVVGVCLGMQLLFEESEEAPGVKGLSL-----I----EGN-VVKLRSRRLPHM 121 (201)
T ss_dssp SCSHHHHHHHHHTTCHHHHHHHHHTTCEEEEETHHHHTTSSEETTEEEEECCCS-----S----SEE-EEECCCSSCSEE
T ss_pred CcHHHHHHHHHhhCHHHHHHHHHHcCCeEEEEChhHHHHHHhhccCCCCCCcce-----e----eeE-EEEcCCCCCCcc
Confidence 554321 3567888888999999999999999988875 22111100 0 000 111111112333
Q ss_pred CCccccCceeeEEecCCchhhhccCCceeEEeeeeeeeeeCchhhhhhccCCeEEEEEeCC-CCeEEEEEeCCCCeEEEE
Q 007533 442 GGTMRLGSRRTYFQIKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDET-SQRMEIVELPNHPYFIGV 520 (599)
Q Consensus 442 GgtmrLG~~~v~l~~~~s~l~~iyg~~~~I~erHrHrYeVnp~~v~~le~~Gl~~sa~s~d-g~~vE~iE~~~hpffvGv 520 (599)
|| +++.+... + ......+.|+|.+.+. ++.++|++++ |..++++++++ + ++|+
T Consensus 122 g~------~~l~~~~~-~---------~~~~v~~~H~~~v~~~--------~~~vla~s~~~g~~~~a~~~~~-~-i~gv 175 (201)
T 1gpw_B 122 GW------NEVIFKDT-F---------PNGYYYFVHTYRAVCE--------EEHVLGTTEYDGEIFPSAVRKG-R-ILGF 175 (201)
T ss_dssp EE------EEEEESSS-S---------CCEEEEEEESEEEEEC--------GGGEEEEEEETTEEEEEEEEET-T-EEEE
T ss_pred cc------eeeEeccC-C---------CCCeEEEECcceeccC--------CCEEEEEEccCCceEEEEEECC-C-EEEE
Confidence 32 23332211 0 1223456688877532 4568888876 64599999876 5 6799
Q ss_pred cccCCCcCCCCCchHHHHHHHHHHhc
Q 007533 521 QFHPEYKSRPGKPSPLFLGLIAAACG 546 (599)
Q Consensus 521 QFHPE~ss~p~~p~pLF~~Fv~aa~~ 546 (599)
|||||+++ .....+|.+|++++..
T Consensus 176 QfHPE~~~--~~~~~l~~~f~~~~~~ 199 (201)
T 1gpw_B 176 QFHPEKSS--KIGRKLLEKVIECSLS 199 (201)
T ss_dssp SSCGGGSH--HHHHHHHHHHHHHSSC
T ss_pred ECCCcccC--HhHHHHHHHHHHHhhc
Confidence 99999983 3356899999998754
No 25
>2ywb_A GMP synthase [glutamine-hydrolyzing]; GMP synthetase, XMP binding, ATP binding, purine nucleotide biosynthetic pathway, structural genomics; 2.10A {Thermus thermophilus} PDB: 2ywc_A*
Probab=99.85 E-value=7.2e-22 Score=217.74 Aligned_cols=180 Identities=18% Similarity=0.180 Sum_probs=124.9
Q ss_pred EEEEeecCCCcchHH-HHHHHHHHcCCcceeeeEEEEecCCCCCCccccCCchhhhHHHHhcc--CCCEEEeCCCCCCCc
Q 007533 298 IAMVGKYTGLSDAYL-SILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLK--GADGILVPGGFGNRG 374 (599)
Q Consensus 298 IaiVGkY~~l~DaY~-SIi~AL~haG~~~~v~v~i~wi~s~~le~~~~~~~p~~y~~a~~~L~--~~DGIlVPGGfG~rg 374 (599)
|+|+ ||++ .|. ++.++|+.+|+.+.+ .+.+. +. +.+. ++||||+||||++..
T Consensus 2 i~il-D~g~---~~~~~i~r~l~~~G~~~~i----~p~~~-~~----------------~~i~~~~~dgiIlsGGp~s~~ 56 (503)
T 2ywb_A 2 VLVL-DFGS---QYTRLIARRLRELRAFSLI----LPGDA-PL----------------EEVLKHRPQALILSGGPRSVF 56 (503)
T ss_dssp EEEE-ESSC---TTHHHHHHHHHTTTCCEEE----EETTC-CH----------------HHHHTTCCSEEEECCCSSCSS
T ss_pred EEEE-ECCC---cHHHHHHHHHHHCCCEEEE----EECCC-CH----------------HHHHhcCCCEEEECCCCchhc
Confidence 8889 5774 455 899999999988644 22221 11 1222 569999999998753
Q ss_pred hhHHHHHHHHHHHcCCCEEEEehhHHHHHHHhccccccccCCCccccCCCCCCCeeeeCCCCCcCcCCCccccCceeeEE
Q 007533 375 VQGKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMRLGSRRTYF 454 (599)
Q Consensus 375 ~eg~i~aik~are~~iP~LGICLGmQll~iefgr~Vlgl~dA~S~Ef~~~~~~~vi~~mpe~~~~~~GgtmrLG~~~v~l 454 (599)
.++.....+.+.+.++|+||||+|||+|+.++|++|.... . .+.|+ +.+.+
T Consensus 57 ~~~~~~~~~~~~~~~~PvLGIC~G~Qlla~~~GG~v~~~~---~--------------------~e~G~------~~v~~ 107 (503)
T 2ywb_A 57 DPDAPRPDPRLFSSGLPLLGICYGMQLLAQELGGRVERAG---R--------------------AEYGK------ALLTR 107 (503)
T ss_dssp CTTCCCCCGGGGCSSCCEEEETHHHHHHHHTTTCEEECC--------------------------CEEE------EECSE
T ss_pred cCCCcchHHHHHhCCCCEEEECHHHHHHHHHhCCeEeeCC---C--------------------Cccce------EEEEe
Confidence 3221222345567899999999999999999999985421 0 12233 33434
Q ss_pred ecCCchhhhccCCceeEEeeeeeeeeeCchhhhhhccCCeEEEEEeCCCCeEEEEEeCCCCeEEEEcccCCCcCCCCCch
Q 007533 455 QIKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPS 534 (599)
Q Consensus 455 ~~~~s~l~~iyg~~~~I~erHrHrYeVnp~~v~~le~~Gl~~sa~s~dg~~vE~iE~~~hpffvGvQFHPE~ss~p~~p~ 534 (599)
.+ +.++..+- .... .++.|+|.|. .+ +.|++++|.++++. +++++++++| ++|+|||||++.+|. +.
T Consensus 108 ~~-~~l~~~~~-~~~~--v~~~H~~~v~-----~l-p~g~~v~A~s~~~~-i~ai~~~~~~-~~gvQFHPE~~~~~~-g~ 174 (503)
T 2ywb_A 108 HE-GPLFRGLE-GEVQ--VWMSHQDAVT-----AP-PPGWRVVAETEENP-VAAIASPDGR-AYGVQFHPEVAHTPK-GM 174 (503)
T ss_dssp EC-SGGGTTCC-SCCE--EEEECSCEEE-----EC-CTTCEEEEECSSCS-CSEEECTTSS-EEEESBCTTSTTSTT-HH
T ss_pred cC-cHHhhcCC-CccE--EEEECCCccc-----cC-CCCCEEEEEECCCC-EEEEEeCCCC-EEEEecCCCcccccc-cH
Confidence 33 24444442 2333 4567887764 34 78999999998876 9999999888 569999999998874 78
Q ss_pred HHHHHHHHHH
Q 007533 535 PLFLGLIAAA 544 (599)
Q Consensus 535 pLF~~Fv~aa 544 (599)
.+|.+|++.|
T Consensus 175 ~ll~~F~~~~ 184 (503)
T 2ywb_A 175 QILENFLELA 184 (503)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHh
Confidence 9999999554
No 26
>3l7n_A Putative uncharacterized protein; glutamine amidotransferase, transferas; 2.70A {Streptococcus mutans}
Probab=99.83 E-value=1e-19 Score=181.49 Aligned_cols=184 Identities=17% Similarity=0.172 Sum_probs=126.5
Q ss_pred eEEEEEeecCCCcchHHHHHHHHHHcCCcceeeeEEEEecCCCCCCccccCCchhhhHHHHhccCCCEEEeCCCCCCCc-
Q 007533 296 VRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRG- 374 (599)
Q Consensus 296 v~IaiVGkY~~l~DaY~SIi~AL~haG~~~~v~v~i~wi~s~~le~~~~~~~p~~y~~a~~~L~~~DGIlVPGGfG~rg- 374 (599)
+||+++- .... +....+...|+..|+++.+ ..+...+.- | +.+.++||||||||++++.
T Consensus 1 m~i~vi~-h~~~-e~~g~~~~~l~~~g~~~~~----~~~~~~~~~-------p-------~~~~~~d~lii~GGp~~~~~ 60 (236)
T 3l7n_A 1 MRIHFIL-HETF-EAPGAYLAWAALRGHDVSM----TKVYRYEKL-------P-------KDIDDFDMLILMGGPQSPSS 60 (236)
T ss_dssp CEEEEEE-CCTT-SCCHHHHHHHHHTTCEEEE----EEGGGTCCC-------C-------SCGGGCSEEEECCCSSCTTC
T ss_pred CeEEEEe-CCCC-CCchHHHHHHHHCCCeEEE----EeeeCCCCC-------C-------CCccccCEEEECCCCCCccc
Confidence 5788873 3322 3566788889999877643 233222110 1 2367899999999998742
Q ss_pred -------h--hHHHHHHHHHHHcCCCEEEEehhHHHHHHHhccccccccCCCccccCCCCCCCeeeeCCCCCcCcCCCcc
Q 007533 375 -------V--QGKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTM 445 (599)
Q Consensus 375 -------~--eg~i~aik~are~~iP~LGICLGmQll~iefgr~Vlgl~dA~S~Ef~~~~~~~vi~~mpe~~~~~~Ggtm 445 (599)
+ .....+++.+.+.++|+||||+|||+|+.++|++|...+ .+++|
T Consensus 61 ~~~~~~~~~~~~~~~~i~~~~~~~~PvLGIClG~QlL~~~~Gg~v~~~~-----------------------~~~~G--- 114 (236)
T 3l7n_A 61 TKKEFPYYDAQAEVKLIQKAAKSEKIIVGVCLGAQLMGVAYGADYLHSP-----------------------KKEIG--- 114 (236)
T ss_dssp CTTTCTTCCHHHHHHHHHHHHHTTCEEEEETHHHHHHHHHTTCCCEEEE-----------------------EEEEE---
T ss_pred ccccCcccchHHHHHHHHHHHHcCCCEEEEchHHHHHHHHhCCEEecCC-----------------------Cceee---
Confidence 1 337789999999999999999999999999998875321 02233
Q ss_pred ccCceeeEEecC---CchhhhccCCceeEEeeeeeeeeeCchhhhhhccCCeEEEEEeCCCCeEEEEEeCCCCeEEEEcc
Q 007533 446 RLGSRRTYFQIK---DCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQF 522 (599)
Q Consensus 446 rLG~~~v~l~~~---~s~l~~iyg~~~~I~erHrHrYeVnp~~v~~le~~Gl~~sa~s~dg~~vE~iE~~~hpffvGvQF 522 (599)
.+++.+.+. +.++..+. ..+...|.|++. ..+ +.+++++|.++++. ++++++.+ + ++|+||
T Consensus 115 ---~~~v~~~~~~~~~~l~~~~~---~~~~v~~~H~~~------~~l-p~~~~vla~s~~~~-~~a~~~~~-~-v~gvQf 178 (236)
T 3l7n_A 115 ---NYLISLTEAGKMDSYLSDFS---DDLLVGHWHGDM------PGL-PDKAQVLAISQGCP-RQIIKFGP-K-QYAFQC 178 (236)
T ss_dssp ---EEEEEECTTGGGCGGGTTSC---SEEEEEEEEEEE------CCC-CTTCEEEEECSSCS-CSEEEEET-T-EEEESS
T ss_pred ---eEEEEEccCcccChHHhcCC---CCcEEEEecCCc------ccC-CChheEEEECCCCC-EEEEEECC-C-EEEEEe
Confidence 456666542 23333332 234456777754 123 67899999998876 89999875 4 679999
Q ss_pred cCCCcCCCCCchHHHHHHHHHHhcc
Q 007533 523 HPEYKSRPGKPSPLFLGLIAAACGQ 547 (599)
Q Consensus 523 HPE~ss~p~~p~pLF~~Fv~aa~~~ 547 (599)
|||++ ..++.+|++.....
T Consensus 179 HPE~~------~~~~~~~~~~~~~~ 197 (236)
T 3l7n_A 179 HLEFT------PELVAALIAQEDDL 197 (236)
T ss_dssp BSSCC------HHHHHHHHHHCSCH
T ss_pred CCCCC------HHHHHHHHHhhhhh
Confidence 99996 46889999887654
No 27
>2ywd_A Glutamine amidotransferase subunit PDXT; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=99.83 E-value=2.9e-20 Score=178.17 Aligned_cols=181 Identities=16% Similarity=0.208 Sum_probs=114.8
Q ss_pred eEEEEEeecCCCcchHHHHHHHHHHcCCcceeeeEEEEecCCCCCCccccCCchhhhHHHHhccCCCEEEeCCCCCCC-c
Q 007533 296 VRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNR-G 374 (599)
Q Consensus 296 v~IaiVGkY~~l~DaY~SIi~AL~haG~~~~v~v~i~wi~s~~le~~~~~~~p~~y~~a~~~L~~~DGIlVPGGfG~r-g 374 (599)
++|+|+. + .+++.++.++|+.+|+.+.+ ++.. +.+.++|||++|||++.. .
T Consensus 3 p~Igi~~-~---~~~~~~~~~~l~~~G~~~~~------~~~~------------------~~l~~~dglil~GG~~~~~~ 54 (191)
T 2ywd_A 3 GVVGVLA-L---QGDFREHKEALKRLGIEAKE------VRKK------------------EHLEGLKALIVPGGESTTIG 54 (191)
T ss_dssp CCEEEEC-S---SSCHHHHHHHHHTTTCCCEE------ECSG------------------GGGTTCSEEEECSSCHHHHH
T ss_pred cEEEEEe-c---CCchHHHHHHHHHCCCEEEE------eCCh------------------hhhccCCEEEECCCChhhhH
Confidence 5799994 3 35789999999999987643 2211 246679999999996431 1
Q ss_pred ----hhHHHHHHHHHHHcC-CCEEEEehhHHHHHHHhcc-ccccccCCCccccCCCCCCCeeeeCCCCCcCcCCCccccC
Q 007533 375 ----VQGKILAAKYAREHR-IPYLGICLGMQVAVIEFAR-SVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMRLG 448 (599)
Q Consensus 375 ----~eg~i~aik~are~~-iP~LGICLGmQll~iefgr-~Vlgl~dA~S~Ef~~~~~~~vi~~mpe~~~~~~GgtmrLG 448 (599)
.......++.+.+++ +|+||||+|||+|+.++++ ++. ++... + +.-..+ ...|.. ..
T Consensus 55 ~~~~~~~~~~~i~~~~~~~~~PilGiC~G~Q~l~~~~gg~~~~--~~lg~--~------~~~~~~-----~~~g~~--~~ 117 (191)
T 2ywd_A 55 KLAREYGIEDEVRKRVEEGSLALFGTCAGAIWLAKEIVGYPEQ--PRLGV--L------EAWVER-----NAFGRQ--VE 117 (191)
T ss_dssp HHHHHTTHHHHHHHHHHTTCCEEEEETHHHHHHEEEETTCTTC--CCCCC--E------EEEEET-----TCSCCS--SS
T ss_pred HhhhhhhHHHHHHHHHHCCCCeEEEECHHHHHHHHHhCCCCCC--ccccc--c------ceEEEc-----CCcCCc--cc
Confidence 124567888888889 9999999999999988876 431 11000 0 000000 001110 11
Q ss_pred ceeeEEecCCchhhhccCCceeEEeeeeeeeeeCchhhhhhccCCeEEEEEeCCCCeEEEEEeCCCCeEEEEcccCCCcC
Q 007533 449 SRRTYFQIKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKS 528 (599)
Q Consensus 449 ~~~v~l~~~~s~l~~iyg~~~~I~erHrHrYeVnp~~v~~le~~Gl~~sa~s~dg~~vE~iE~~~hpffvGvQFHPE~ss 528 (599)
.+.. + ..+..+ ..+...+.|+|.+. .+ +.++.++|++ ++ .+|+++..+ ++|+|||||+++
T Consensus 118 ~~~~----~-~~~~~~----~~~~~~~~Hs~~v~-----~l-~~~~~~~a~~-~~-~~~a~~~~~---~~gvQfHPE~~~ 177 (191)
T 2ywd_A 118 SFEE----D-LEVEGL----GSFHGVFIRAPVFR-----RL-GEGVEVLARL-GD-LPVLVRQGK---VLASSFHPELTE 177 (191)
T ss_dssp EEEE----E-EEETTT----EEEEEEEESCCEEE-----EE-CTTCEEEEEE-TT-EEEEEEETT---EEEESSCGGGSS
T ss_pred cccc----c-ccccCC----CceeEEEEccccee-----cc-CCCcEEEEEE-CC-EEEEEEECC---EEEEEeCCCCCC
Confidence 1100 0 111111 22334566777653 22 5688899998 44 599999864 679999999876
Q ss_pred CCCCchHHHHHHHHHHh
Q 007533 529 RPGKPSPLFLGLIAAAC 545 (599)
Q Consensus 529 ~p~~p~pLF~~Fv~aa~ 545 (599)
. + .+|.+|+++|.
T Consensus 178 ~---~-~l~~~f~~~~~ 190 (191)
T 2ywd_A 178 D---P-RLHRYFLELAG 190 (191)
T ss_dssp C---C-HHHHHHHHHHT
T ss_pred C---c-HHHHHHHHHhc
Confidence 3 3 89999998863
No 28
>3m3p_A Glutamine amido transferase; structural genomics, nysgrc, PSI-2; HET: MSE; 1.30A {Methylobacillus flagellatus} PDB: 3l83_A*
Probab=99.83 E-value=8.2e-20 Score=184.74 Aligned_cols=185 Identities=15% Similarity=0.178 Sum_probs=126.4
Q ss_pred eEEEEEeecCCCcchHHHHHHHHHHcCCcceeeeEEEEecCCCCCCccccCCchhhhHHHHhccCCCEEEeCCCCCCC--
Q 007533 296 VRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNR-- 373 (599)
Q Consensus 296 v~IaiVGkY~~l~DaY~SIi~AL~haG~~~~v~v~i~wi~s~~le~~~~~~~p~~y~~a~~~L~~~DGIlVPGGfG~r-- 373 (599)
.+|+++- .... ....++.++|+..|+++.+ ..+...+. .| ..+.++||||||||+++.
T Consensus 4 ~~vliiq-h~~~-e~~~~i~~~l~~~G~~v~v----~~~~~~~~-------~p-------~~~~~~d~lIl~GGp~~~~d 63 (250)
T 3m3p_A 4 KPVMIIQ-FSAS-EGPGHFGDFLAGEHIPFQV----LRMDRSDP-------LP-------AEIRDCSGLAMMGGPMSAND 63 (250)
T ss_dssp CCEEEEE-SSSS-CCCHHHHHHHHHTTCCEEE----EEGGGTCC-------CC-------SCGGGSSEEEECCCSSCTTS
T ss_pred CeEEEEE-CCCC-CCHHHHHHHHHHCCCeEEE----EeccCCCc-------Cc-------CccccCCEEEECCCCCcccc
Confidence 4677773 2222 2456888999999988654 12222111 01 246789999999998753
Q ss_pred ---chhHHHHHHHHHHHcCCCEEEEehhHHHHHHHhccccccccCCCccccCCCCCCCeeeeCCCCCcCcCCCccccCce
Q 007533 374 ---GVQGKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMRLGSR 450 (599)
Q Consensus 374 ---g~eg~i~aik~are~~iP~LGICLGmQll~iefgr~Vlgl~dA~S~Ef~~~~~~~vi~~mpe~~~~~~GgtmrLG~~ 450 (599)
.....+..++.+.+.++|+||||+|||+|+.++|++|...+ .+++|| .
T Consensus 64 ~~~~~~~~~~~i~~~~~~~~PvlGIC~G~Qll~~~lGG~V~~~~-----------------------~~e~G~------~ 114 (250)
T 3m3p_A 64 DLPWMPTLLALIRDAVAQRVPVIGHCLGGQLLAKAMGGEVTDSP-----------------------HAEIGW------V 114 (250)
T ss_dssp CCTTHHHHHHHHHHHHHHTCCEEEETHHHHHHHHHTTCCEEEEE-----------------------EEEEEE------E
T ss_pred cchHHHHHHHHHHHHHHcCCCEEEECHHHHHHHHHhCCEEEeCC-----------------------CCceee------E
Confidence 23556788999989999999999999999999999885421 123454 4
Q ss_pred eeEEecCCchhhhccCCceeEEeeeeeeeeeCchhhhhhccCCeEEEEEeCCCCeEEEEEeCCCCeEEEEcccCCCcCCC
Q 007533 451 RTYFQIKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRP 530 (599)
Q Consensus 451 ~v~l~~~~s~l~~iyg~~~~I~erHrHrYeVnp~~v~~le~~Gl~~sa~s~dg~~vE~iE~~~hpffvGvQFHPE~ss~p 530 (599)
++.+.+. +....+++-...+...|.|+|.| .+ +.|+.++|.++++. +++++++++ ++|+|||||++.
T Consensus 115 ~v~~~~~-~~~~~l~g~~~~~~v~~~H~~~v------~l-p~~~~vlA~s~~~~-~~a~~~~~~--~~GvQfHPE~~~-- 181 (250)
T 3m3p_A 115 RAWPQHV-PQALEWLGTWDELELFEWHYQTF------SI-PPGAVHILRSEHCA-NQAYVLDDL--HIGFQCHIEMQA-- 181 (250)
T ss_dssp EEEECSS-HHHHHHHSCSSCEEEEEEEEEEE------CC-CTTEEEEEEETTEE-EEEEEETTT--EEEESSCTTCCH--
T ss_pred EEEEecC-CCCcccccCCCccEEEEEcccee------ec-CCCCEEEEEeCCCC-EEEEEECCe--eEEEEeCCcCCH--
Confidence 5665543 22233332123455678898876 23 77999999998875 999999884 679999999863
Q ss_pred CCchHHHHHHHHHHhc
Q 007533 531 GKPSPLFLGLIAAACG 546 (599)
Q Consensus 531 ~~p~pLF~~Fv~aa~~ 546 (599)
.....+++....
T Consensus 182 ----~~~~~~l~~~~~ 193 (250)
T 3m3p_A 182 ----HMVREWCSISPE 193 (250)
T ss_dssp ----HHHHHHHHHCGG
T ss_pred ----HHHHHHHHhhHH
Confidence 455666665443
No 29
>1q7r_A Predicted amidotransferase; structural genomics, YAAE, PDX2, predicted glutamine amidotransferase, PSI; HET: MSE; 1.90A {Geobacillus stearothermophilus} SCOP: c.23.16.1
Probab=99.81 E-value=5.6e-20 Score=181.35 Aligned_cols=185 Identities=15% Similarity=0.207 Sum_probs=117.5
Q ss_pred CceEEEEEeecCCCcchHHHHHHHHHHcCCcceeeeEEEEecCCCCCCccccCCchhhhHHHHhccCCCEEEeCCCCCCC
Q 007533 294 EPVRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNR 373 (599)
Q Consensus 294 ~~v~IaiVGkY~~l~DaY~SIi~AL~haG~~~~v~v~i~wi~s~~le~~~~~~~p~~y~~a~~~L~~~DGIlVPGGfG~r 373 (599)
..++|+|+. + .++|.+++++|+.+|+.+.+ ++.. +.+.++||||||||++..
T Consensus 22 ~~~~I~il~-~---~~~~~~~~~~l~~~G~~~~~------~~~~------------------~~l~~~Dglil~GG~~~~ 73 (219)
T 1q7r_A 22 SNMKIGVLG-L---QGAVREHVRAIEACGAEAVI------VKKS------------------EQLEGLDGLVLPGGESTT 73 (219)
T ss_dssp CCCEEEEES-C---GGGCHHHHHHHHHTTCEEEE------ECSG------------------GGGTTCSEEEECCCCHHH
T ss_pred CCCEEEEEe-C---CCCcHHHHHHHHHCCCEEEE------ECCH------------------HHHhhCCEEEECCCChHH
Confidence 468999994 4 34788888999999876532 3321 236789999999998643
Q ss_pred c-----hhHHHHHHHHHHHcCCCEEEEehhHHHHHHHhccccccccCCCccccCCCCCCCeeeeCCCCCcCcCCCccccC
Q 007533 374 G-----VQGKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMRLG 448 (599)
Q Consensus 374 g-----~eg~i~aik~are~~iP~LGICLGmQll~iefgr~Vlgl~dA~S~Ef~~~~~~~vi~~mpe~~~~~~GgtmrLG 448 (599)
. ..+...+++.+.++++|+||||+|||+|+.++++++. ++... + +.-..+ ...|. +.+
T Consensus 74 ~~~~~~~~~~~~~i~~~~~~~~PilGIC~G~QlL~~~~gg~~~--~~lg~--~------~~~~~~-----~~~g~--~~~ 136 (219)
T 1q7r_A 74 MRRLIDRYGLMEPLKQFAAAGKPMFGTCAGLILLAKRIVGYDE--PHLGL--M------DITVER-----NSFGR--QRE 136 (219)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCEEEETTHHHHHEEEEESSCC--CCCCC--E------EEEEEC-----HHHHC--CCC
T ss_pred HHHHhhhhHHHHHHHHHHHcCCeEEEECHHHHHHHHHhCCCCc--CCcCc--c------ceEEEe-----cCCCc--ccc
Confidence 1 1334678899999999999999999999988887652 11000 0 000000 00111 011
Q ss_pred ceeeEEecCCchhhhccCCceeEEeeeeeeeeeCchhhhhhccCCeEEEEEeCCCCeEEEEEeCCCCeEEEEcccCCCcC
Q 007533 449 SRRTYFQIKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKS 528 (599)
Q Consensus 449 ~~~v~l~~~~s~l~~iyg~~~~I~erHrHrYeVnp~~v~~le~~Gl~~sa~s~dg~~vE~iE~~~hpffvGvQFHPE~ss 528 (599)
.+.. + ..+.. ++ ..+...+.|++.+. .+ +.++.++|.+ ++. +|+++.. +++|+|||||+++
T Consensus 137 ~~~~----~-~~~~g-~g--~~~~~~~~h~~~v~-----~l-~~~~~v~a~s-dg~-~ea~~~~---~i~GvQfHPE~~~ 197 (219)
T 1q7r_A 137 SFEA----E-LSIKG-VG--DGFVGVFIRAPHIV-----EA-GDGVDVLATY-NDR-IVAARQG---QFLGCSFHPELTD 197 (219)
T ss_dssp CEEE----E-EEETT-TE--EEEEEEESSCCEEE-----EE-CTTCEEEEEE-TTE-EEEEEET---TEEEESSCGGGSS
T ss_pred ceec----C-cccCC-CC--CceEEEEEecceee-----cc-CCCcEEEEEc-CCE-EEEEEEC---CEEEEEECcccCC
Confidence 1110 0 11111 12 23334455665543 33 6789999998 664 8999983 4789999999985
Q ss_pred CCCCchHHHHHHHHHHhc
Q 007533 529 RPGKPSPLFLGLIAAACG 546 (599)
Q Consensus 529 ~p~~p~pLF~~Fv~aa~~ 546 (599)
. ..+|++|++++.+
T Consensus 198 ~----~~l~~~fl~~~~~ 211 (219)
T 1q7r_A 198 D----HRLMQYFLNMVKE 211 (219)
T ss_dssp C----CHHHHHHHHHHHH
T ss_pred C----HHHHHHHHHHHHH
Confidence 4 3899999998865
No 30
>2nv0_A Glutamine amidotransferase subunit PDXT; 3-layer(ABA) sandwich, rossmann fold, glutaminase; 1.73A {Bacillus subtilis} SCOP: c.23.16.1 PDB: 1r9g_A 2nv2_B*
Probab=99.81 E-value=5.7e-20 Score=177.45 Aligned_cols=184 Identities=15% Similarity=0.186 Sum_probs=115.2
Q ss_pred eEEEEEeecCCCcchHHHHHHHHHHcCCcceeeeEEEEecCCCCCCccccCCchhhhHHHHhccCCCEEEeCCCCCCCc-
Q 007533 296 VRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRG- 374 (599)
Q Consensus 296 v~IaiVGkY~~l~DaY~SIi~AL~haG~~~~v~v~i~wi~s~~le~~~~~~~p~~y~~a~~~L~~~DGIlVPGGfG~rg- 374 (599)
+||+|++ | .++|.+++++|+.+|+++. +++.. +.+.++|||++|||++...
T Consensus 2 m~I~il~-~---~~~~~~~~~~l~~~g~~~~------~~~~~------------------~~l~~~d~iil~GG~~~~~~ 53 (196)
T 2nv0_A 2 LTIGVLG-L---QGAVREHIHAIEACGAAGL------VVKRP------------------EQLNEVDGLILPGGESTTMR 53 (196)
T ss_dssp CEEEEEC-S---SSCCHHHHHHHHHTTCEEE------EECSG------------------GGGGGCSEEEECCSCHHHHH
T ss_pred cEEEEEE-c---cCCcHHHHHHHHHCCCEEE------EeCCh------------------HHHhhCCEEEECCCChhhHH
Confidence 5899994 4 4588888999999997543 23321 2366899999999975432
Q ss_pred ----hhHHHHHHHHHHHcCCCEEEEehhHHHHHHHhccccccccCCCccccCCCCCCCeeeeCCCCCcCcCCCccccCce
Q 007533 375 ----VQGKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMRLGSR 450 (599)
Q Consensus 375 ----~eg~i~aik~are~~iP~LGICLGmQll~iefgr~Vlgl~dA~S~Ef~~~~~~~vi~~mpe~~~~~~GgtmrLG~~ 450 (599)
..+....++.+.++++|+||||+|||+|+.++++++.. + ... .|.-..+ ...|. +
T Consensus 54 ~~~~~~~~~~~i~~~~~~~~pilgIC~G~q~l~~~~gg~~~~--~-----lg~---~~~~~~~-----~~~g~------~ 112 (196)
T 2nv0_A 54 RLIDTYQFMEPLREFAAQGKPMFGTCAGLIILAKEIAGSDNP--H-----LGL---LNVVVER-----NSFGR------Q 112 (196)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCEEEETHHHHHHSBCCC----C--C-----CCC---SCEEEEC-----CCSCT------T
T ss_pred HHhhhHHHHHHHHHHHHCCCcEEEECHHHHHHHHHhcCCCCC--c-----ccC---CceeEec-----cCCCc------c
Confidence 12346788888899999999999999999888875421 1 100 0000000 00111 1
Q ss_pred eeEEecCCchhhhccCCceeEEeeeeeeeeeCchhhhhhccCCeEEEEEeCCCCeEEEEEeCCCCeEEEEcccCCCcCCC
Q 007533 451 RTYFQIKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRP 530 (599)
Q Consensus 451 ~v~l~~~~s~l~~iyg~~~~I~erHrHrYeVnp~~v~~le~~Gl~~sa~s~dg~~vE~iE~~~hpffvGvQFHPE~ss~p 530 (599)
...+..+ +.+..+ +. .+...+.|++.+. .+ +.++.++|.+ ++. +|+++.. +++|+|||||+++.
T Consensus 113 ~~~~~~~-~~~~~~-g~--~~~~~~~h~~~v~-----~~-~~~~~v~a~~-d~~-~~a~~~~---~~~gvQfHPE~~~~- 176 (196)
T 2nv0_A 113 VDSFEAD-LTIKGL-DE--PFTGVFIRAPHIL-----EA-GENVEVLSEH-NGR-IVAAKQG---QFLGCSFHPELTED- 176 (196)
T ss_dssp TSEEEEE-ECCTTC-SS--CEEEEEESCCEEE-----EE-CTTCEEEEEE-TTE-EEEEEET---TEEEESSCTTSSSC-
T ss_pred cccccCC-cccccC-CC--ceEEEEEecceec-----cc-CCCcEEEEEE-CCE-EEEEEEC---CEEEEEECCccCCc-
Confidence 0011111 233332 32 2333445666553 23 5688999988 554 8999874 47899999999765
Q ss_pred CCchHHHHHHHHHHhcc
Q 007533 531 GKPSPLFLGLIAAACGQ 547 (599)
Q Consensus 531 ~~p~pLF~~Fv~aa~~~ 547 (599)
..+|.+|++++.+.
T Consensus 177 ---~~l~~~fl~~~~~~ 190 (196)
T 2nv0_A 177 ---HRVTQLFVEMVEEY 190 (196)
T ss_dssp ---CHHHHHHHHHHHHH
T ss_pred ---hHHHHHHHHHHHhh
Confidence 28999999988653
No 31
>2vxo_A GMP synthase [glutamine-hydrolyzing]; proto-oncogene, phosphoprotein, GMP synthetase, guanine monophosphate synthetase, chromosomal rearrangement; HET: XMP; 2.5A {Homo sapiens}
Probab=99.80 E-value=4.4e-20 Score=210.42 Aligned_cols=183 Identities=16% Similarity=0.121 Sum_probs=118.6
Q ss_pred eEEEEEeecCCCcchHH-HHHHHHHHcCCcceeeeEEEEecCCCCCCccccCCchhhhHHHHhccCCCEEEeCCCCCCCc
Q 007533 296 VRIAMVGKYTGLSDAYL-SILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRG 374 (599)
Q Consensus 296 v~IaiVGkY~~l~DaY~-SIi~AL~haG~~~~v~v~i~wi~s~~le~~~~~~~p~~y~~a~~~L~~~DGIlVPGGfG~rg 374 (599)
.+|+|++ |++ .|. .+.++|+.+|+.+.+ .+.+.. .+ ++ ...++||||+||||++..
T Consensus 30 ~~I~VLD-fg~---q~~~liar~lre~Gv~~~i----vp~~~~-~e------------~i--~~~~~dGIILsGGp~s~~ 86 (697)
T 2vxo_A 30 GAVVILD-AGA---QYGKVIDRRVRELFVQSEI----FPLETP-AF------------AI--KEQGFRAIIISGGPNSVY 86 (697)
T ss_dssp CCEEEEE-EC-----CHHHHHHHHHHTTCCEEE----EETTCC-HH------------HH--HHHTCSEEEEEECC----
T ss_pred CEEEEEE-CCC---chHHHHHHHHHHCCCEEEE----EECCCC-HH------------HH--hhcCCCEEEECCCCCccc
Confidence 4799994 653 444 477999999987644 222211 10 01 125899999999998753
Q ss_pred hhHHHHHHHHHHHcCCCEEEEehhHHHHHHHhccccccccCCCccccCCCCCCCeeeeCCCCCcCcCCCccccCceeeEE
Q 007533 375 VQGKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMRLGSRRTYF 454 (599)
Q Consensus 375 ~eg~i~aik~are~~iP~LGICLGmQll~iefgr~Vlgl~dA~S~Ef~~~~~~~vi~~mpe~~~~~~GgtmrLG~~~v~l 454 (599)
.++.....+.+.+.++|+||||+|||+|+.++|++|...+. .+.| .+++.+
T Consensus 87 ~~~~~~~~~~i~~~g~PvLGIC~G~QlLa~~lGG~v~~~~~-----------------------~e~G------~~~v~~ 137 (697)
T 2vxo_A 87 AEDAPWFDPAIFTIGKPVLGICYGMQMMNKVFGGTVHKKSV-----------------------REDG------VFNISV 137 (697)
T ss_dssp ---CCCCCGGGTTSSCCEEEEEHHHHHHHHHTTCCBCC------------------------------------CEEEEE
T ss_pred CccchhHHHHHHhCCCCEEEECHHHHHHHHHhCCeEeecCC-----------------------Cccc------eEEEEe
Confidence 22111112334567899999999999999999999854210 2233 456666
Q ss_pred ecCCchhhhccCCceeEEeeeeeeeeeCchhhhhhccCCeEEEEEeCCCCeEEEEEeCCCCeEEEEcccCCCcCCCCCch
Q 007533 455 QIKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPS 534 (599)
Q Consensus 455 ~~~~s~l~~iyg~~~~I~erHrHrYeVnp~~v~~le~~Gl~~sa~s~dg~~vE~iE~~~hpffvGvQFHPE~ss~p~~p~ 534 (599)
.+++.++..+ +... ..++.|+|.|. .+ +.|++++|.++ + .+++++++++|+ +|+|||||++..+. +.
T Consensus 138 ~~~~~Lf~~l-~~~~--~v~~~H~~~V~-----~l-p~g~~vlA~s~-~-~i~ai~~~~~~i-~GvQFHPE~~~t~~-g~ 204 (697)
T 2vxo_A 138 DNTCSLFRGL-QKEE--VVLLTHGDSVD-----KV-ADGFKVVARSG-N-IVAGIANESKKL-YGAQFHPEVGLTEN-GK 204 (697)
T ss_dssp CTTSGGGTTC-CSEE--EECCCSSCCBS-----SC-CTTCEEEEEET-T-EEEEEEETTTTE-EEESSCTTSSSSTT-HH
T ss_pred cCCChhhhcC-CccC--cceeeccccee-----cC-CCCeEEEEEeC-C-ceEEEEeCCCCE-EEEEecccCCCCcc-ch
Confidence 6553334333 3233 34566887764 34 78999999984 4 699999999985 69999999998875 78
Q ss_pred HHHHHHHHH
Q 007533 535 PLFLGLIAA 543 (599)
Q Consensus 535 pLF~~Fv~a 543 (599)
.+|.+|+..
T Consensus 205 ~ll~nFl~~ 213 (697)
T 2vxo_A 205 VILKNFLYD 213 (697)
T ss_dssp HHHHHHHTT
T ss_pred hhhhhhhhc
Confidence 999999943
No 32
>1ka9_H Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.23.16.1
Probab=99.79 E-value=1.1e-19 Score=176.32 Aligned_cols=184 Identities=24% Similarity=0.290 Sum_probs=114.6
Q ss_pred eEEEEEeecCCCcchHHHHHHHHHHcCCcceeeeEEEEecCCCCCCccccCCchhhhHHHHhccCCCEEEeCCCCCCCch
Q 007533 296 VRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRGV 375 (599)
Q Consensus 296 v~IaiVGkY~~l~DaY~SIi~AL~haG~~~~v~v~i~wi~s~~le~~~~~~~p~~y~~a~~~L~~~DGIlVPGGfG~rg~ 375 (599)
++|+|+ +|+. .++.|+.++|+.+|+++.+ ++.. +.+.++|||++||| |++..
T Consensus 3 ~~I~ii-d~~~--~~~~~~~~~l~~~G~~~~~------~~~~------------------~~l~~~d~lil~G~-g~~~~ 54 (200)
T 1ka9_H 3 MKALLI-DYGS--GNLRSAAKALEAAGFSVAV------AQDP------------------KAHEEADLLVLPGQ-GHFGQ 54 (200)
T ss_dssp CEEEEE-CSSC--SCHHHHHHHHHHTTCEEEE------ESST------------------TSCSSCSEEEECCC-SCHHH
T ss_pred cEEEEE-eCCC--ccHHHHHHHHHHCCCeEEE------ecCh------------------HHcccCCEEEECCC-CcHHH
Confidence 589999 6752 3688999999999987643 2211 23568999999873 44211
Q ss_pred -------hHHHHHHHHHHHcCCCEEEEehhHHHHHHH---hccccccccCCCccccCCCCCCCeeeeCCCCCcCcCCCcc
Q 007533 376 -------QGKILAAKYAREHRIPYLGICLGMQVAVIE---FARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTM 445 (599)
Q Consensus 376 -------eg~i~aik~are~~iP~LGICLGmQll~ie---fgr~Vlgl~dA~S~Ef~~~~~~~vi~~mpe~~~~~~Ggtm 445 (599)
.....+++.+.++++|+||||+|||+|+.+ +|+ . ++.. .+ +.. +..++....+++||
T Consensus 55 ~~~~l~~~~~~~~i~~~~~~~~PilGIC~G~Qll~~~~~~~Gg-~---~~l~--~~----~g~-v~~~~~~~~~~~G~-- 121 (200)
T 1ka9_H 55 VMRAFQESGFVERVRRHLERGLPFLGICVGMQVLYEGSEEAPG-V---RGLG--LV----PGE-VRRFRAGRVPQMGW-- 121 (200)
T ss_dssp HHHTTSSSCTHHHHHHHHHTTCCEEECTHHHHTTSSEETTSTT-C---CCCC--SS----SSE-EEECCSSSSSEEEE--
T ss_pred HHHHHHhcCHHHHHHHHHHcCCeEEEEcHHHHHHHHhccccCC-c---CCcc--cc----ccE-EEECCCCCCCceeE--
Confidence 236788999989999999999999999877 443 1 1110 01 011 11111111234443
Q ss_pred ccCceeeEEecCCchhhhccCCceeEEeeeeeeeeeCchhhhhhccCCeEEEEEeCC-CCeEEEEEeCCCCeEEEEcccC
Q 007533 446 RLGSRRTYFQIKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDET-SQRMEIVELPNHPYFIGVQFHP 524 (599)
Q Consensus 446 rLG~~~v~l~~~~s~l~~iyg~~~~I~erHrHrYeVnp~~v~~le~~Gl~~sa~s~d-g~~vE~iE~~~hpffvGvQFHP 524 (599)
+++.+.+ + +..+.+ ....+.|+|.+ +. .++ .+ |++++ |..++++...+ +++|+||||
T Consensus 122 ----~~v~~~~--~-l~~~~~----~~~~~~Hs~~~-~~------~~~-~v-a~s~~~g~~~~~~~~~~--~i~gvQfHP 179 (200)
T 1ka9_H 122 ----NALEFGG--A-FAPLTG----RHFYFANSYYG-PL------TPY-SL-GKGEYEGTPFTALLAKE--NLLAPQFHP 179 (200)
T ss_dssp ----EECEECG--G-GGGGTT----CEEEEEESEEC-CC------CTT-CC-EEEEETTEEEEEEEECS--SEEEESSCT
T ss_pred ----EEEEech--h-hhcCCC----CCEEEeccccc-CC------CCC-cE-EEEEeCCeEEEEEEeeC--CEEEEecCC
Confidence 4555554 3 555542 23467799988 42 222 35 77766 63366666655 478999999
Q ss_pred CCcCCCCCchHHH---HHHHHHH
Q 007533 525 EYKSRPGKPSPLF---LGLIAAA 544 (599)
Q Consensus 525 E~ss~p~~p~pLF---~~Fv~aa 544 (599)
|++. .....+| ++|++.+
T Consensus 180 E~~~--~~g~~l~~~~~~F~~~~ 200 (200)
T 1ka9_H 180 EKSG--KAGLAFLALARRYFEVL 200 (200)
T ss_dssp TSSH--HHHHHHHHHHHHHC---
T ss_pred CcCc--cchhHHHHHHHHHHhhC
Confidence 9986 3356899 9998753
No 33
>2iss_D Glutamine amidotransferase subunit PDXT; (beta/alpha)8-barrel, alpha/beta three layer sandwich, lyase transferase; HET: 5RP; 2.90A {Thermotoga maritima}
Probab=99.79 E-value=1.2e-19 Score=177.38 Aligned_cols=186 Identities=12% Similarity=0.127 Sum_probs=111.7
Q ss_pred CCCceEEEEEeecCCCcchHHHHHHHHHHcCCcceeeeEEEEecCCCCCCccccCCchhhhHHHHhccCCCEEEeCCCCC
Q 007533 292 LHEPVRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFG 371 (599)
Q Consensus 292 ~~~~v~IaiVGkY~~l~DaY~SIi~AL~haG~~~~v~v~i~wi~s~~le~~~~~~~p~~y~~a~~~L~~~DGIlVPGGfG 371 (599)
..++++|+|+ +| ..+|.++.++|+.+|+++. +++.. +.+.++|||++|||+.
T Consensus 17 ~~~~~~I~ii-~~---~~~~~~~~~~l~~~g~~~~------~~~~~------------------~~l~~~d~iil~GG~~ 68 (208)
T 2iss_D 17 RGSHMKIGVL-GV---QGDVREHVEALHKLGVETL------IVKLP------------------EQLDMVDGLILPGGES 68 (208)
T ss_dssp ---CCEEEEE-CS---SSCHHHHHHHHHHTTCEEE------EECSG------------------GGGGGCSEEEECSSCH
T ss_pred CCCCcEEEEE-EC---CCchHHHHHHHHHCCCEEE------EeCCh------------------HHHhhCCEEEECCCcH
Confidence 3456899999 57 2389999999999987543 23321 2356899999999853
Q ss_pred CCc-----hhHHHHHHHHHHHcCCCEEEEehhHHHHHHHhccccccccCCCccccCCCCCCCeeeeCCCCCcCcCCCccc
Q 007533 372 NRG-----VQGKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMR 446 (599)
Q Consensus 372 ~rg-----~eg~i~aik~are~~iP~LGICLGmQll~iefgr~Vlgl~dA~S~Ef~~~~~~~vi~~mpe~~~~~~Ggtmr 446 (599)
... ..+..++++.+.++++|+||||+|||+|+.++++... +...- + |....+ ...|..
T Consensus 69 ~~~~~~~~~~~~~~~i~~~~~~g~PilGIC~G~QlL~~~~gg~~~--~~lg~--~------~~~v~~-----~~~g~~-- 131 (208)
T 2iss_D 69 TTMIRILKEMDMDEKLVERINNGLPVFATCAGVILLAKRIKNYSQ--EKLGV--L------DITVER-----NAYGRQ-- 131 (208)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCCEEEETHHHHHHEEEEC---C--CCCCC--E------EEEEET-----TTTCSG--
T ss_pred HHHHhhhhhhhHHHHHHHHHHCCCeEEEECHHHHHHHHHcCCCCC--CCccc--c------ceEEEe-----cCCCcc--
Confidence 211 1224678888888999999999999999888876421 11000 0 000000 001111
Q ss_pred cCceeeEEecCCchhhhccCCceeEEeeeeeeeeeCchhhhhhccCCeEEEEEeCCCCeEEEEEeCCCCeEEEEcccCCC
Q 007533 447 LGSRRTYFQIKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEY 526 (599)
Q Consensus 447 LG~~~v~l~~~~s~l~~iyg~~~~I~erHrHrYeVnp~~v~~le~~Gl~~sa~s~dg~~vE~iE~~~hpffvGvQFHPE~ 526 (599)
...+..+ +.+..+ + ..++...+.|++.+. .+ +.++.++|.+ ++ .+|+++.. + ++|+|||||+
T Consensus 132 ----~~~~~~~-~~~~~~-~-~~~~~~~~~h~~~v~-----~~-~~~~~v~a~~-d~-~~~a~~~~--~-i~GvQfHPE~ 193 (208)
T 2iss_D 132 ----VESFETF-VEIPAV-G-KDPFRAIFIRAPRIV-----ET-GKNVEILATY-DY-DPVLVKEG--N-ILACTFHPEL 193 (208)
T ss_dssp ----GGCEEEE-ECCGGG-C-SSCEEEEESSCCEEE-----EE-CSSCEEEEEE-TT-EEEEEEET--T-EEEESSCGGG
T ss_pred ----cccccCC-cccccC-C-CCceEEEEEeCcccc-----cC-CCCcEEEEEE-CC-EEEEEEEC--C-EEEEEeCCCc
Confidence 0001122 233332 2 122333344554443 22 5688899987 55 48999874 4 6799999999
Q ss_pred cCCCCCchHHHHHHHHHH
Q 007533 527 KSRPGKPSPLFLGLIAAA 544 (599)
Q Consensus 527 ss~p~~p~pLF~~Fv~aa 544 (599)
+..+ .+|++|+++|
T Consensus 194 ~~~~----~l~~~fl~~~ 207 (208)
T 2iss_D 194 TDDL----RLHRYFLEMV 207 (208)
T ss_dssp SSCC----HHHHHHHTTC
T ss_pred CCcH----HHHHHHHHHh
Confidence 8753 8999998764
No 34
>2abw_A PDX2 protein, glutaminase; PLP-synthase, vitamin B6, malaria, transferase; HET: PG4; 1.62A {Plasmodium falciparum} SCOP: c.23.16.1 PDB: 4ads_G
Probab=99.74 E-value=5.3e-18 Score=167.56 Aligned_cols=198 Identities=13% Similarity=0.152 Sum_probs=112.6
Q ss_pred ceEEEEEeecCCCcchHHHHHHHHHHc---CCcceeeeEEEEecCCCCCCccccCCchhhhHHHHhccCCCEEEeCCCCC
Q 007533 295 PVRIAMVGKYTGLSDAYLSILKALLHA---SVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFG 371 (599)
Q Consensus 295 ~v~IaiVGkY~~l~DaY~SIi~AL~ha---G~~~~v~v~i~wi~s~~le~~~~~~~p~~y~~a~~~L~~~DGIlVPGGfG 371 (599)
+++|+|+. |. .++.+.+++|+.+ |+.+. +++.. +.+.++||||||||+.
T Consensus 3 ~~~I~Il~-~~---~~~~~~~~~l~~~~~~G~~~~------~~~~~------------------~~l~~~dglil~GG~~ 54 (227)
T 2abw_A 3 EITIGVLS-LQ---GDFEPHINHFIKLQIPSLNII------QVRNV------------------HDLGLCDGLVIPGGES 54 (227)
T ss_dssp CEEEEEEC-TT---SCCHHHHHHHHTTCCTTEEEE------EECSH------------------HHHHTCSEEEECCSCH
T ss_pred CcEEEEEe-CC---CCcHHHHHHHHHhccCCeEEE------EEcCc------------------cccccCCEEEECCCcH
Confidence 47899994 54 3677889999998 76532 23211 3467899999999974
Q ss_pred CC-----ch--hHHHHHHHHHHHc-CCCEEEEehhHHHHHHHhccccccccCCCccccCCCCCCCeeeeCCCCCcCcCCC
Q 007533 372 NR-----GV--QGKILAAKYAREH-RIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGG 443 (599)
Q Consensus 372 ~r-----g~--eg~i~aik~are~-~iP~LGICLGmQll~iefgr~Vlgl~dA~S~Ef~~~~~~~vi~~mpe~~~~~~Gg 443 (599)
+. .. .++..+++.+.+. ++|+||||+|||+|+.++++.+..-......++.- .++...+ ...|.
T Consensus 55 ~~~~~~~~~d~~~~~~~i~~~~~~~g~PilGIC~G~QlL~~~~gg~~~~~~~~~~~~lG~---~~~~~~~-----~~~g~ 126 (227)
T 2abw_A 55 TTVRRCCAYENDTLYNALVHFIHVLKKPIWGTCAGCILLSKNVENIKLYSNFGNKFSFGG---LDITICR-----NFYGS 126 (227)
T ss_dssp HHHHHHTTHHHHHHHHHHHHHHHTSCCCEEEETHHHHHTEEEEECCCSCCTTGGGSCCCC---EEEEEEC-----CC---
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHhcCCEEEEECHHHHHHHHHhcCCccccccccccccCc---eeEEEEe-----cCCCc
Confidence 31 11 3567888888899 99999999999999888776541100000011100 0000000 00010
Q ss_pred c-cccCceeeEEecCCchhhhccCCceeEEeeeeeeeeeCchhhhhhccCCeEEEEEeC-----CCCeEEEEEeCCCCeE
Q 007533 444 T-MRLGSRRTYFQIKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDE-----TSQRMEIVELPNHPYF 517 (599)
Q Consensus 444 t-mrLG~~~v~l~~~~s~l~~iyg~~~~I~erHrHrYeVnp~~v~~le~~Gl~~sa~s~-----dg~~vE~iE~~~hpff 517 (599)
. .++ ...+.+ ++ +..+.+.. +..+..|+|.+. .+.+.++.++|.++ ++. +++++.. ++
T Consensus 127 ~~~~~-~~~~~~-~~---~~~~~g~~--~~~~~~h~~~v~-----~~~~~~~~vla~~~~~~~g~~~-~~a~~~~---~v 190 (227)
T 2abw_A 127 QNDSF-ICSLNI-IS---DSSAFKKD--LTAACIRAPYIR-----EILSDEVKVLATFSHESYGPNI-IAAVEQN---NC 190 (227)
T ss_dssp -CCEE-EEECEE-CC---CCTTCCTT--CEEEEESCCEEE-----EECCTTCEEEEEEEETTTEEEE-EEEEEET---TE
T ss_pred ccccc-cccccc-cc---ccccCCCc--eeEEEEEcceEe-----ecCCCCcEEEEEcccccCCCCc-eEEEEEC---CE
Confidence 0 000 001111 10 00001111 112233454432 11146788989886 343 8888863 37
Q ss_pred EEEcccCCCcCCCCCchHHHHHHHHHHhcch
Q 007533 518 IGVQFHPEYKSRPGKPSPLFLGLIAAACGQL 548 (599)
Q Consensus 518 vGvQFHPE~ss~p~~p~pLF~~Fv~aa~~~~ 548 (599)
+|+|||||++..+ .+|++|+++|....
T Consensus 191 ~gvQfHPE~~~~~----~l~~~Fl~~~~~~~ 217 (227)
T 2abw_A 191 LGTVFHPELLPHT----AFQQYFYEKVKNYK 217 (227)
T ss_dssp EEESSCGGGSSCC----HHHHHHHHHHHHHH
T ss_pred EEEEECCeeCCCc----HHHHHHHHHHHhhh
Confidence 8999999998653 89999999986543
No 35
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=99.67 E-value=1.5e-17 Score=185.47 Aligned_cols=197 Identities=14% Similarity=0.127 Sum_probs=117.2
Q ss_pred eEEEEEeecCCCcchHHHHHHHHHHcCCcceeeeEEEEecCCCCCCccccCCchhhhHHHHhccCCCEEEeCCCCCCCch
Q 007533 296 VRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRGV 375 (599)
Q Consensus 296 v~IaiVGkY~~l~DaY~SIi~AL~haG~~~~v~v~i~wi~s~~le~~~~~~~p~~y~~a~~~L~~~DGIlVPGGfG~rg~ 375 (599)
++|+|+ +|.. ..+.++.++|+.+|+.+.+ ++..+. ..+.++|||||||| |+...
T Consensus 5 ~~I~Ii-d~~~--g~~~~~~~~l~~~G~~~~v------v~~~~~----------------~~l~~~DglILpGg-G~~~~ 58 (555)
T 1jvn_A 5 PVVHVI-DVES--GNLQSLTNAIEHLGYEVQL------VKSPKD----------------FNISGTSRLILPGV-GNYGH 58 (555)
T ss_dssp CEEEEE-CCSC--SCCHHHHHHHHHTTCEEEE------ESSGGG----------------CCSTTCSCEEEEEC-SCHHH
T ss_pred CEEEEE-ECCC--CCHHHHHHHHHHCCCEEEE------ECCccc----------------cccccCCEEEECCC-CchHh
Confidence 589999 5862 2567999999999976533 332110 13678999999884 33221
Q ss_pred -------hHHHHHHHHHHHcCCCEEEEehhHHHHHHHh--ccccccccCCCccccCCCCCCCeeeeCCC--CCcCcCCCc
Q 007533 376 -------QGKILAAKYAREHRIPYLGICLGMQVAVIEF--ARSVLNLRDANSTEFDPNTKNPCVIFMPE--GSKTHMGGT 444 (599)
Q Consensus 376 -------eg~i~aik~are~~iP~LGICLGmQll~ief--gr~Vlgl~dA~S~Ef~~~~~~~vi~~mpe--~~~~~~Ggt 444 (599)
.+...+++.+.+.++|+||||+|||+|+.++ ++..-+|.. + ... +...+. ...+|+||+
T Consensus 59 ~~~~l~~~~~~~~i~~~~~~g~PiLGIC~G~QlL~~a~~egg~~~~Lg~-----l----gg~-v~~~~~~~~~~~~~G~~ 128 (555)
T 1jvn_A 59 FVDNLFNRGFEKPIREYIESGKPIMGIXVGLQALFAGSVESPKSTGLNY-----I----DFK-LSRFDDSEKPVPEIGWN 128 (555)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCEEEEEHHHHTTEEEETTBTTCCCCCS-----E----EEE-EEECCTTTSCSSEEEEE
T ss_pred HhhhhhhccHHHHHHHHHHcCCcEEEEchhhhhhhhhhhcCCCccccCC-----C----CcE-EEECCcCCCCCccccce
Confidence 2356788888899999999999999998776 111111100 0 000 111111 123455653
Q ss_pred cccCceeeEEecCCchhhhccCCceeEEeeeeeeeeeCchhh-hhhccCCeEEEEEeCCC--CeEEEEEeCCCCeEEEEc
Q 007533 445 MRLGSRRTYFQIKDCKSAKLYGNRTFIDERHRHRYEVNPDMI-ARLENAGLSFTGKDETS--QRMEIVELPNHPYFIGVQ 521 (599)
Q Consensus 445 mrLG~~~v~l~~~~s~l~~iyg~~~~I~erHrHrYeVnp~~v-~~le~~Gl~~sa~s~dg--~~vE~iE~~~hpffvGvQ 521 (599)
++.+. . .++..+. .... ..+.|+|.+..... ..+.+.++.++|+++.+ ..+++++. .+ ++|+|
T Consensus 129 ------~v~~~-~-~L~~~l~-~~~~--~~~vHS~~~~~i~~~~~~L~~g~~vlA~s~~~~D~~i~ai~~--~~-i~GvQ 194 (555)
T 1jvn_A 129 ------SCIPS-E-NLFFGLD-PYKR--YYFVHSFAAILNSEKKKNLENDGWKIAKAKYGSEEFIAAVNK--NN-IFATQ 194 (555)
T ss_dssp ------CCCCC-T-TCCTTCC-TTSC--EEEEESEECBCCHHHHHHHHHTTCEEEEEEETTEEEEEEEEE--TT-EEEES
T ss_pred ------EEEEc-C-HHHhhCC-CCce--EEEEEEEEEEecccccccCCCCCEEEEEEcCCCCCeEEEEEe--CC-EEEEE
Confidence 33222 2 4444443 1212 34568888754210 00113467788877643 24899994 34 67999
Q ss_pred ccCCCcCCCCCchHHHHHHHHHH
Q 007533 522 FHPEYKSRPGKPSPLFLGLIAAA 544 (599)
Q Consensus 522 FHPE~ss~p~~p~pLF~~Fv~aa 544 (599)
||||+++. ....+|.+|+++.
T Consensus 195 FHPE~s~~--~g~~l~~~Fl~~~ 215 (555)
T 1jvn_A 195 FHPEKSGK--AGLNVIENFLKQQ 215 (555)
T ss_dssp SBGGGSHH--HHHHHHHHHHTTC
T ss_pred eCcEecCh--hHHHHHHHHHhcc
Confidence 99998642 2467999999875
No 36
>2vdj_A Homoserine O-succinyltransferase; methionine biosynthesis, amino-acid biosynthesis, homoserine transacetylase, homoserine transsuccinylase; 2.00A {Bacillus cereus} PDB: 2ghr_A
Probab=99.47 E-value=7.8e-13 Score=137.11 Aligned_cols=195 Identities=14% Similarity=0.145 Sum_probs=112.1
Q ss_pred CceEEEEEeecCCCcchHH-HHHHHHHHcCCcceeeeEEEEecCCCCC-CccccCCch-hhhHHHH-hccCCCEEEeCCC
Q 007533 294 EPVRIAMVGKYTGLSDAYL-SILKALLHASVDLRKKLVIDWIPACDLE-DATEKENPD-AYKAAWK-LLKGADGILVPGG 369 (599)
Q Consensus 294 ~~v~IaiVGkY~~l~DaY~-SIi~AL~haG~~~~v~v~i~wi~s~~le-~~~~~~~p~-~y~~a~~-~L~~~DGIlVPGG 369 (599)
..+||||+ .--.....|- .+.+.|......+ ++.++...+-+ +.+..+... .|....+ ...++||+||+||
T Consensus 34 rplkI~IL-nlmp~k~~te~qf~rlL~~~~~qv----~v~~~~~~~~~~~~~~~~hl~~~y~~f~~~~~~~~DglIITGa 108 (301)
T 2vdj_A 34 RALKIAIL-NLMPTKQETEAQLLRLIGNTPLQL----DVHLLHMESHLSRNVAQEHLTSFYKTFRDIENEKFDGLIITGA 108 (301)
T ss_dssp CCEEEEEE-CCCSSHHHHHHHHHHHHTCSSSCE----EEEEECCCC------------CCEECHHHHTTSCEEEEEECCC
T ss_pred CCceEEEE-eCCCCcCchHHHHHHHhcCCCCcE----EEEEEeccCCCCCCccHHHHhhcccCcccccccccCEEEECCC
Confidence 46899999 4433333343 3455554444433 33344332211 111111111 1222222 2478999999999
Q ss_pred CCC-------CchhHHHHHHHHHHHcCCCEEEEehhHHHHHHHhcc-ccccccCCCccccCCCCCCCeeeeCCCCCcCcC
Q 007533 370 FGN-------RGVQGKILAAKYAREHRIPYLGICLGMQVAVIEFAR-SVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHM 441 (599)
Q Consensus 370 fG~-------rg~eg~i~aik~are~~iP~LGICLGmQll~iefgr-~Vlgl~dA~S~Ef~~~~~~~vi~~mpe~~~~~~ 441 (599)
+-. +-+......+++++++++|+||||+|+|++..++++ ....+. .+
T Consensus 109 p~~~~~~ed~~yw~el~~li~~~~~~~~~~lgIC~GaQ~~l~~~~G~~k~~~~-------------------------~K 163 (301)
T 2vdj_A 109 PVETLSFEEVDYWEELKRIMEYSKTNVTSTLHICWGAQAGLYHHYGVQKYPLK-------------------------EK 163 (301)
T ss_dssp TTTTSCGGGSTTHHHHHHHHHHHHHHEEEEEEETHHHHHHHHHHHCCCCEEEE-------------------------EE
T ss_pred CCcCCCcccCchHHHHHHHHHHHHHcCCcEEEEcHHHHHHHHHhCCCccccCC-------------------------CC
Confidence 843 234668889999999999999999999996666554 221111 00
Q ss_pred CCccccCceeeEEec-CCchhhhccCCceeEEeeeeeeeeeCchhhhhhccCCeEEEEEeCCCCeEEEEEeCCCCeEEEE
Q 007533 442 GGTMRLGSRRTYFQI-KDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGV 520 (599)
Q Consensus 442 GgtmrLG~~~v~l~~-~~s~l~~iyg~~~~I~erHrHrYeVnp~~v~~le~~Gl~~sa~s~dg~~vE~iE~~~hpffvGv 520 (599)
..|..+..+.. .+.+++.+ + .....-|.|.-++..+.+..+ +|++++|.|+... +++++.++.. ++++
T Consensus 164 ----~~Gv~~~~~~~~~~pL~~g~-~--~~f~~phsr~~~~~~~~v~~~--pga~vLA~S~~~~-~~~~~~~~~~-~~~v 232 (301)
T 2vdj_A 164 ----MFGVFEHEVREQHVKLLQGF-D--ELFFAVHSRHTEVRESDIREV--KELTLLANSEEAG-VHLVIGQEGR-QVFA 232 (301)
T ss_dssp ----EEEEEEEEECCSSCGGGTTC-C--SEEEEEEEEEEECCHHHHHTC--TTEEEEEEETTTE-EEEEEEGGGT-EEEE
T ss_pred ----EEEEEEEEecCCCCccccCC-C--CceEeeeEeccCcCHHHccCC--CCCEEEEeCCCCc-ceEEEecCCC-EEEE
Confidence 12333443332 22444433 2 233344544345555666654 4999999987765 9999997765 5699
Q ss_pred cccCCCcCC
Q 007533 521 QFHPEYKSR 529 (599)
Q Consensus 521 QFHPE~ss~ 529 (599)
||||||...
T Consensus 233 QgHpEyd~~ 241 (301)
T 2vdj_A 233 LGHSEYSCD 241 (301)
T ss_dssp CSCTTCCTT
T ss_pred ECCCCCCHH
Confidence 999999765
No 37
>2h2w_A Homoserine O-succinyltransferase; TM0881, (EC 2.3.1.46), HOM O-transsuccinylase, HTS, (TM0881), structural genomics; 2.52A {Thermotoga maritima}
Probab=99.46 E-value=7.5e-13 Score=137.75 Aligned_cols=207 Identities=14% Similarity=0.119 Sum_probs=118.2
Q ss_pred CceEEEEEeecCCCcchHH-HHHHHHHHcCCcceeeeEEEEecCCCCCCcc-ccCCchhhhHHHHh--ccCCCEEEeCCC
Q 007533 294 EPVRIAMVGKYTGLSDAYL-SILKALLHASVDLRKKLVIDWIPACDLEDAT-EKENPDAYKAAWKL--LKGADGILVPGG 369 (599)
Q Consensus 294 ~~v~IaiVGkY~~l~DaY~-SIi~AL~haG~~~~v~v~i~wi~s~~le~~~-~~~~p~~y~~a~~~--L~~~DGIlVPGG 369 (599)
..+||||+ .--.....|- .+.+.|......+ ++.++...+-+..+ ..+...+|...+.. ..++||+||+||
T Consensus 46 rplkI~IL-nlmp~k~~te~qf~rlL~~~~~qv----~v~~~~~~~~~~~~~~~~hl~~~y~~f~~~~~~~~DglIITGs 120 (312)
T 2h2w_A 46 RPLEILIL-NLMPDKIKTEIQLLRLLGNTPLQV----NVTLLYTETHKPKHTPIEHILKFYTTFSAVKDRKFDGFIITGA 120 (312)
T ss_dssp CCEEEEEE-CCCSSHHHHHHHHHHHHHSSSSCE----EEEEECCSCCCCCSSCHHHHHHHCBCGGGTTTCCEEEEEECCC
T ss_pred CCceEEEE-eCCCCcCchHHHHHHHhcCCCCcE----EEEEEEccCCCCCCccHHHHhhccCCcccccccCcCEEEECCC
Confidence 46899999 4433333344 4555565554443 33344332211100 00001111111122 478999999999
Q ss_pred CCC-------CchhHHHHHHHHHHHcCCCEEEEehhHHHHHHHhcccc-ccccCCCccccCCCCCCCeeeeCCCCCcCcC
Q 007533 370 FGN-------RGVQGKILAAKYAREHRIPYLGICLGMQVAVIEFARSV-LNLRDANSTEFDPNTKNPCVIFMPEGSKTHM 441 (599)
Q Consensus 370 fG~-------rg~eg~i~aik~are~~iP~LGICLGmQll~iefgr~V-lgl~dA~S~Ef~~~~~~~vi~~mpe~~~~~~ 441 (599)
+-. +.+..+...+++++++++|+||||+|+|+++.++++-. ..+. .+
T Consensus 121 P~~~~~~ed~~yw~el~~li~~~~~~~~p~LGIC~GaQ~~l~~~~G~~k~~~~-------------------------~K 175 (312)
T 2h2w_A 121 PVELLPFEEVDYWEELTEIMEWSRHNVYSTMFICWAAQAGLYYFYGIPKYELP-------------------------QK 175 (312)
T ss_dssp SCTTSCGGGSTTHHHHHHHHHHHHHHEEEEEEETHHHHHHHHHHHCCCCEEEE-------------------------EE
T ss_pred CCCCCCCccCchHHHHHHHHHHHHHcCCcEEEECHHHHHHHHHhCCCccccCC-------------------------CC
Confidence 843 23466888999999999999999999999766666522 1110 01
Q ss_pred CCccccCceeeEEecCCchhhhccCCceeEEeeeeeeeeeCchhhhhhccCCeEEEEEeCCCCeEEEEEeCCCCeEEEEc
Q 007533 442 GGTMRLGSRRTYFQIKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQ 521 (599)
Q Consensus 442 GgtmrLG~~~v~l~~~~s~l~~iyg~~~~I~erHrHrYeVnp~~v~~le~~Gl~~sa~s~dg~~vE~iE~~~hpffvGvQ 521 (599)
..|..+..+.+.+.+++.+ + .....-|.|.-++..+.+... +|++++|.|+... +++++.++.. ++++|
T Consensus 176 ----~~Gv~~~~~~~~~pL~~g~-~--~~f~vphsr~~e~~~~~v~~~--pga~vLA~S~~~~-~q~~~~~~~~-~~~vQ 244 (312)
T 2h2w_A 176 ----LSGVYKHRVAKDSVLFRGH-D--DFFWAPHSRYTEVKKEDIDKV--PELEILAESDEAG-VYVVANKSER-QIFVT 244 (312)
T ss_dssp ----EEEEEEEEESSCCGGGTTC-C--SEEEEEEEEEEECCHHHHTTC--C-CEEEEEETTTE-EEEEECSSSS-EEEEC
T ss_pred ----EEEEEEEEEcCCCccccCC-C--CceEeeEEeccccCHHHccCC--CCCEEEEcCCCCc-ceEEEecCCC-EEEEE
Confidence 1234455554433444443 2 223334533334444545443 5999999987765 9999997766 57999
Q ss_pred ccCCCcCCCCCchHHHHHHHHHHhc
Q 007533 522 FHPEYKSRPGKPSPLFLGLIAAACG 546 (599)
Q Consensus 522 FHPE~ss~p~~p~pLF~~Fv~aa~~ 546 (599)
|||||... -+-..+.....+
T Consensus 245 gHPEyd~~-----~l~~ey~rd~~~ 264 (312)
T 2h2w_A 245 GHPEYDRY-----TLRDEYYRDIGR 264 (312)
T ss_dssp SCTTCCTT-----HHHHHHHHHHHT
T ss_pred CCCCCCHH-----HHHHHHHHHHHc
Confidence 99999765 333445544443
No 38
>3ugj_A Phosphoribosylformylglycinamidine synthase; amidotransferase, glutaminase, thioester intermediate, ligas; HET: ADP; 1.78A {Salmonella enterica subsp} PDB: 1t3t_A* 3ujn_A* 3umm_A*
Probab=98.92 E-value=5.3e-09 Score=126.03 Aligned_cols=194 Identities=20% Similarity=0.235 Sum_probs=113.8
Q ss_pred ceEEEEEeecCCCcchHHHHHHHHHHcCCcceeeeEEEEecCCCCCCccccCCchhhhHHHHhccCCCEEEeCCCCC--C
Q 007533 295 PVRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFG--N 372 (599)
Q Consensus 295 ~v~IaiVGkY~~l~DaY~SIi~AL~haG~~~~v~v~i~wi~s~~le~~~~~~~p~~y~~a~~~L~~~DGIlVPGGfG--~ 372 (599)
++||||+ +|... ..-.++.+||+++|+.+.. .|+. ++.. ++ +.++++|+|++||||. +
T Consensus 1047 ~pkVaIi-~~~G~-N~~~~~~~A~~~aG~~~~~----v~~~--dl~~-----~~-------~~l~~~d~lvlPGGfSygD 1106 (1303)
T 3ugj_A 1047 RPKVAVL-REQGV-NSHVEMAAAFHRAGFDAID----VHMS--DLLG-----GR-------IGLGNFHALVACGGFSYGD 1106 (1303)
T ss_dssp CCEEEEE-ECTTC-CCHHHHHHHHHHTTCEEEE----EEHH--HHHT-----TS-------CCGGGCSEEEECCSCGGGG
T ss_pred CCEEEEE-ecCCc-CCHHHHHHHHHHhCCceEE----Eeec--cccc-----Cc-------ccHhhCCEEEECCCCcchh
Confidence 5799999 57433 2567999999999987643 3442 1100 00 2478999999999964 3
Q ss_pred C---ch---------hHHHHHHHHH-HHcCCCEEEEehhHHHHHHHhccccccccCCCccccCCCCCCCeeeeCCCCCcC
Q 007533 373 R---GV---------QGKILAAKYA-REHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKT 439 (599)
Q Consensus 373 r---g~---------eg~i~aik~a-re~~iP~LGICLGmQll~iefgr~Vlgl~dA~S~Ef~~~~~~~vi~~mpe~~~~ 439 (599)
. +. .++..+++.+ .+.++|+||||+|||+|+ +.. .+ ++.+. ..| .++..
T Consensus 1107 ~l~~g~~~a~~~l~~~~l~~~l~~~~~~~g~pvLGICnG~QlL~-e~~-gl--lPg~~--------~~p--~l~~N---- 1168 (1303)
T 3ugj_A 1107 VLGAGEGWAKSILFNHRVRDEFETFFHRPQTLALGVCNGCQMMS-NLR-EL--IPGSE--------LWP--RFVRN---- 1168 (1303)
T ss_dssp TTSTTHHHHHHHHTSHHHHHHHHHHHHSSSCEEEEETHHHHHHH-TTG-GG--STTCT--------TCC--EEECC----
T ss_pred hhccchhHHHHHHhchhHHHHHHHHHHhCCCcEEEECHHHHHHH-Hhc-Cc--CCCCC--------CCC--eEecC----
Confidence 1 10 2344556654 357899999999999995 321 12 22221 111 11111
Q ss_pred cCCCccccCce--eeEEecCCch-hhhccCCceeEEeeeee-eeeeC-chhhhhhccCCeEEEEE-------------eC
Q 007533 440 HMGGTMRLGSR--RTYFQIKDCK-SAKLYGNRTFIDERHRH-RYEVN-PDMIARLENAGLSFTGK-------------DE 501 (599)
Q Consensus 440 ~~GgtmrLG~~--~v~l~~~~s~-l~~iyg~~~~I~erHrH-rYeVn-p~~v~~le~~Gl~~sa~-------------s~ 501 (599)
..+ |+=.+ .+.+.++.|. ++.+-|..-.|...|.. ||.+. ++.+++|+..|....-+ ++
T Consensus 1169 -~s~--~f~~r~~~~~v~~~~s~~~~~~~g~~~~i~vaHgEG~~~~~~~~~l~~l~~~~~v~~rY~d~~g~~~~~yp~NP 1245 (1303)
T 3ugj_A 1169 -HSD--RFEARFSLVEVTQSPSLLLQGMVGSQMPIAVSHGEGRVEVRDDAHLAALESKGLVALRYVDNFGKVTETYPANP 1245 (1303)
T ss_dssp -TTS--SCEEEEEEEEECCCSCGGGTTCTTCEEEEEEEESSCEEECSSHHHHHHHHHTTCEEEEEBCTTSCBCCSTTTSS
T ss_pred -CCC--CeEEeCeEEEECCCCChhhhccCCCEEeeeeEeCCCCeeeCCHHHHHHHHhCCcEEEEEeCCCCCcccCCCCCC
Confidence 111 11111 2233333343 44433323346667753 45554 46677887888766654 35
Q ss_pred CCCe--EEEEEeCCCCeEEEEcccCCCcCCC
Q 007533 502 TSQR--MEIVELPNHPYFIGVQFHPEYKSRP 530 (599)
Q Consensus 502 dg~~--vE~iE~~~hpffvGvQFHPE~ss~p 530 (599)
+|.. |++|-.++.. ++|...|||...++
T Consensus 1246 NGS~~~IaGi~s~~Gr-vlg~MpHPEr~~~~ 1275 (1303)
T 3ugj_A 1246 NGSPNGITAVTTENGR-VTIMMPHPERVFRT 1275 (1303)
T ss_dssp SCCGGGEEEEECTTSS-EEEESSBGGGSSBG
T ss_pred CCChhhceEeECCCCC-EEEEcCChHHcccc
Confidence 6653 8999999888 56999999986654
No 39
>3l4e_A Uncharacterized peptidase LMO0363; hypothetical protein LMO0363, csgid, similar to peptidase E, hydrolase, protease, serine protease; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=98.40 E-value=2.2e-07 Score=91.22 Aligned_cols=92 Identities=15% Similarity=0.037 Sum_probs=63.9
Q ss_pred ceEEEEEeecCCC---cchH-HHHHHHHHHcCCcceeeeEEEEecCCCCCCccccCCchhhhHHHHhccCCCEEEeCCCC
Q 007533 295 PVRIAMVGKYTGL---SDAY-LSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGF 370 (599)
Q Consensus 295 ~v~IaiVGkY~~l---~DaY-~SIi~AL~haG~~~~v~v~i~wi~s~~le~~~~~~~p~~y~~a~~~L~~~DGIlVPGGf 370 (599)
..+|++| .|... .|.| .|+.++|++.|+++.+ ++-.+- ++ .+..+.+.++|+|++|||-
T Consensus 27 ~~~i~~I-p~As~~~~~~~~~~s~~~a~~~lG~~v~~------~~i~~~-------~~---~~~~~~l~~ad~I~l~GG~ 89 (206)
T 3l4e_A 27 GKTVTFI-PTASTVEEVTFYVEAGKKALESLGLLVEE------LDIATE-------SL---GEITTKLRKNDFIYVTGGN 89 (206)
T ss_dssp TCEEEEE-CGGGGGCSCCHHHHHHHHHHHHTTCEEEE------CCTTTS-------CH---HHHHHHHHHSSEEEECCSC
T ss_pred CCEEEEE-CCCCCCCCHHHHHHHHHHHHHHcCCeEEE------EEecCC-------Ch---HHHHHHHHhCCEEEECCCC
Confidence 4799999 57643 2344 5899999999986532 321110 11 1122468899999999952
Q ss_pred CCCc-----hhHHHHHHHHHHHcCCCEEEEehhHHHHH
Q 007533 371 GNRG-----VQGKILAAKYAREHRIPYLGICLGMQVAV 403 (599)
Q Consensus 371 G~rg-----~eg~i~aik~are~~iP~LGICLGmQll~ 403 (599)
-.+- ..++..+++.+.++++|++|||+|||++.
T Consensus 90 ~~~l~~~L~~~gl~~~l~~~~~~G~p~~G~sAGa~~l~ 127 (206)
T 3l4e_A 90 TFFLLQELKRTGADKLILEEIAAGKLYIGESAGAVITS 127 (206)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHHTTCEEEEETHHHHTTS
T ss_pred HHHHHHHHHHCChHHHHHHHHHcCCeEEEECHHHHHhc
Confidence 2221 24678889999999999999999999984
No 40
>1fy2_A Aspartyl dipeptidase; serine protease, catalytic triad, strand-helix MO hydrolase; 1.20A {Salmonella typhimurium} SCOP: c.23.16.4 PDB: 1fye_A
Probab=98.34 E-value=1.8e-07 Score=92.98 Aligned_cols=88 Identities=18% Similarity=0.247 Sum_probs=61.7
Q ss_pred ceEEEEEeecCC---CcchH-HHHHHHHHHcCCcceeeeEEEEecCCCCCCccccCCchhhhHHHHhccCCCEEEeCCCC
Q 007533 295 PVRIAMVGKYTG---LSDAY-LSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGF 370 (599)
Q Consensus 295 ~v~IaiVGkY~~---l~DaY-~SIi~AL~haG~~~~v~v~i~wi~s~~le~~~~~~~p~~y~~a~~~L~~~DGIlVPGGf 370 (599)
..+|+++ +|.. -.|.| .|+.++|++.|+++.. +.. .+ + ..+.+.++|+|++|||-
T Consensus 31 ~~~i~iI-~~a~~~~~~~~~~~~~~~al~~lG~~~~~------v~~--~~------d------~~~~l~~ad~I~lpGG~ 89 (229)
T 1fy2_A 31 RRSAVFI-PFAGVTQTWDEYTDKTAEVLAPLGVNVTG------IHR--VA------D------PLAAIEKAEIIIVGGGN 89 (229)
T ss_dssp CCEEEEE-CTTCCSSCHHHHHHHHHHHHGGGTCEEEE------TTS--SS------C------HHHHHHHCSEEEECCSC
T ss_pred CCeEEEE-ECCCCCCCHHHHHHHHHHHHHHCCCEEEE------Eec--cc------c------HHHHHhcCCEEEECCCc
Confidence 4689999 6863 12344 4899999999976432 221 00 0 12568899999999953
Q ss_pred CCCc-----hhHHHHHHHHHHHcCCCEEEEehhHHHHH
Q 007533 371 GNRG-----VQGKILAAKYAREHRIPYLGICLGMQVAV 403 (599)
Q Consensus 371 G~rg-----~eg~i~aik~are~~iP~LGICLGmQll~ 403 (599)
-.+- ..++..+++.+.++++|++|||+|||+|+
T Consensus 90 ~~~~~~~l~~~gl~~~l~~~~~~G~p~~G~sAG~~~l~ 127 (229)
T 1fy2_A 90 TFQLLKESRERGLLAPMADRVKRGALYIGWSAGANLAC 127 (229)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTTCEEEEETHHHHHTS
T ss_pred HHHHHHHHHHCChHHHHHHHHHcCCEEEEECHHHHhhc
Confidence 2221 13577888888888999999999999984
No 41
>1oi4_A Hypothetical protein YHBO; PFPI/THIJ family, complete proteome, PFPI, THIJ, bacterial targets at IGS-CNRS, france, BIGS, structural genomics; 2.03A {Escherichia coli} SCOP: c.23.16.2
Probab=97.62 E-value=0.00016 Score=69.29 Aligned_cols=103 Identities=17% Similarity=0.193 Sum_probs=63.7
Q ss_pred CceEEEEEeecCCCcc-hHHHHHHHHHHcCCcceeeeEEEEecCCC-CCCc----cccCCchhhhHHHHhccCCCEEEeC
Q 007533 294 EPVRIAMVGKYTGLSD-AYLSILKALLHASVDLRKKLVIDWIPACD-LEDA----TEKENPDAYKAAWKLLKGADGILVP 367 (599)
Q Consensus 294 ~~v~IaiVGkY~~l~D-aY~SIi~AL~haG~~~~v~v~i~wi~s~~-le~~----~~~~~p~~y~~a~~~L~~~DGIlVP 367 (599)
...||+++ -|....+ ......+.|+.+|+++.+ ...+... +... ....+. .+.+ -...++|+|+||
T Consensus 22 ~~~kV~il-l~~g~~~~e~~~~~~~l~~ag~~v~~----vs~~~~~~v~~~~g~~~v~~~~-~l~~--~~~~~~D~livp 93 (193)
T 1oi4_A 22 LSKKIAVL-ITDEFEDSEFTSPADEFRKAGHEVIT----IEKQAGKTVKGKKGEASVTIDK-SIDE--VTPAEFDALLLP 93 (193)
T ss_dssp CCCEEEEE-CCTTBCTHHHHHHHHHHHHTTCEEEE----EESSTTCEEECTTSSCEEECCE-EGGG--CCGGGCSEEEEC
T ss_pred cCCEEEEE-ECCCCCHHHHHHHHHHHHHCCCEEEE----EECCCCcceecCCCCeEEECCC-ChHH--CCcccCCEEEEC
Confidence 34689988 4655543 356789999999876543 1111111 1000 000000 1100 013578999999
Q ss_pred CCCCCC---chhHHHHHHHHHHHcCCCEEEEehhHHHHHH
Q 007533 368 GGFGNR---GVQGKILAAKYAREHRIPYLGICLGMQVAVI 404 (599)
Q Consensus 368 GGfG~r---g~eg~i~aik~are~~iP~LGICLGmQll~i 404 (599)
||+|.. ..+..+..++.+.++++|+.|||.|.|+|+-
T Consensus 94 GG~~~~~l~~~~~l~~~l~~~~~~gk~i~aIC~G~~lLa~ 133 (193)
T 1oi4_A 94 GGHSPDYLRGDNRFVTFTRDFVNSGKPVFAICHGPQLLIS 133 (193)
T ss_dssp CBTHHHHHTTSHHHHHHHHHHHHTTCCEEEETTTHHHHHH
T ss_pred CCcCHHHhhhCHHHHHHHHHHHHcCCEEEEECHHHHHHHH
Confidence 997642 2345778888888999999999999999864
No 42
>3l18_A Intracellular protease I; gatase1_PFPI_LIKE, hydrolase; 1.78A {Thermococcus onnurineus} SCOP: c.23.16.2 PDB: 1g2i_A
Probab=97.21 E-value=0.00079 Score=62.42 Aligned_cols=100 Identities=13% Similarity=0.262 Sum_probs=62.1
Q ss_pred ceEEEEEeecCCCcch-HHHHHHHHHHcCCcceeeeEEEEecCCCCCC-c--cccCCchhhhHHHHhc--cCCCEEEeCC
Q 007533 295 PVRIAMVGKYTGLSDA-YLSILKALLHASVDLRKKLVIDWIPACDLED-A--TEKENPDAYKAAWKLL--KGADGILVPG 368 (599)
Q Consensus 295 ~v~IaiVGkY~~l~Da-Y~SIi~AL~haG~~~~v~v~i~wi~s~~le~-~--~~~~~p~~y~~a~~~L--~~~DGIlVPG 368 (599)
.+||+++ =|....+. .....+.|+.+|+++.+- ..+...+.. . ....+. .+ +.+ ..+|+|+|||
T Consensus 2 ~~ki~il-~~~g~~~~e~~~~~~~l~~ag~~v~~v----s~~~~~v~~~~g~~i~~~~-~~----~~~~~~~~D~livpG 71 (168)
T 3l18_A 2 SMKVLFL-SADGFEDLELIYPLHRIKEEGHEVYVA----SFQRGKITGKHGYSVNVDL-TF----EEVDPDEFDALVLPG 71 (168)
T ss_dssp CCEEEEE-CCTTBCHHHHHHHHHHHHHTTCEEEEE----ESSSEEEECTTSCEEEECE-EG----GGCCGGGCSEEEECC
T ss_pred CcEEEEE-eCCCccHHHHHHHHHHHHHCCCEEEEE----ECCCCEEecCCCcEEeccC-Ch----hHCCHhhCCEEEECC
Confidence 4688888 46555433 557888999998765431 111000000 0 000000 01 122 3689999999
Q ss_pred CCCCC---chhHHHHHHHHHHHcCCCEEEEehhHHHHHH
Q 007533 369 GFGNR---GVQGKILAAKYAREHRIPYLGICLGMQVAVI 404 (599)
Q Consensus 369 GfG~r---g~eg~i~aik~are~~iP~LGICLGmQll~i 404 (599)
|+|.. ..+..+..++.+.++++|+.+||-|.++|+-
T Consensus 72 G~~~~~~~~~~~l~~~l~~~~~~~k~i~aiC~G~~~La~ 110 (168)
T 3l18_A 72 GKAPEIVRLNEKAVMITRRMFEDDKPVASICHGPQILIS 110 (168)
T ss_dssp BSHHHHHTTCHHHHHHHHHHHHTTCCEEEETTTHHHHHH
T ss_pred CcCHHHhccCHHHHHHHHHHHHCCCEEEEECHhHHHHHH
Confidence 98642 2355778899999999999999999999863
No 43
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=96.91 E-value=0.0051 Score=57.66 Aligned_cols=97 Identities=15% Similarity=0.213 Sum_probs=70.2
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccccCCCCCCCccccceEEEccCCccccCCCCccccccCC
Q 007533 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFMDI 80 (599)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~dpyln~d~gtmsp~~hgevfv~~dg~e~dldlg~yerfl~~ 80 (599)
||.|.|+++ -.|.||=.+|+.++..|..+|.+|..+..||.-|.- .|+..
T Consensus 1 M~vi~v~s~-kgG~GKTt~a~~la~~la~~g~~vlliD~D~~~~~~-----------------------------~~~~~ 50 (206)
T 4dzz_A 1 MKVISFLNP-KGGSGKTTAVINIATALSRSGYNIAVVDTDPQMSLT-----------------------------NWSKA 50 (206)
T ss_dssp CEEEEECCS-STTSSHHHHHHHHHHHHHHTTCCEEEEECCTTCHHH-----------------------------HHHTT
T ss_pred CeEEEEEeC-CCCccHHHHHHHHHHHHHHCCCeEEEEECCCCCCHH-----------------------------HHHhc
Confidence 888989876 788999999999999999999999999999753321 01100
Q ss_pred CCCCCCcccchHhhHHHHhhhhcCCCCCCeeEEcccchHHHHHHHHHHhcccCCCCCCCCcEEEEeeCccccccccchHH
Q 007533 81 KLTRDNNITTGKIYQSVIDKERKGDYLGKTVQVVPHITDEIQDWIERVAMIPVDGKEGPVDVCVIELGGTIGDIESMPFI 160 (599)
Q Consensus 81 ~l~~~~n~ttgkiy~~vi~ker~g~ylg~tvqviphit~~i~~~i~~~~~~p~d~~~~~~dv~i~e~ggtvgdies~pf~ 160 (599)
. .. .+.++|--.+.+.+.+.++. ..+|++||+.++..++ ...
T Consensus 51 ~---~~-----------------------~~~~~~~~~~~l~~~l~~l~--------~~yD~viiD~~~~~~~----~~~ 92 (206)
T 4dzz_A 51 G---KA-----------------------AFDVFTAASEKDVYGIRKDL--------ADYDFAIVDGAGSLSV----ITS 92 (206)
T ss_dssp S---CC-----------------------SSEEEECCSHHHHHTHHHHT--------TTSSEEEEECCSSSSH----HHH
T ss_pred C---CC-----------------------CCcEEecCcHHHHHHHHHhc--------CCCCEEEEECCCCCCH----HHH
Confidence 0 00 04566655688888888875 3689999999998854 334
Q ss_pred HHHHH
Q 007533 161 EALGQ 165 (599)
Q Consensus 161 ea~rq 165 (599)
.+++.
T Consensus 93 ~~l~~ 97 (206)
T 4dzz_A 93 AAVMV 97 (206)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 45443
No 44
>3qxc_A Dethiobiotin synthetase; DTBS, structural genomics, ATP BIND biology, protein structure initiative, midwest center for S genomics, MCSG; HET: ATP; 1.34A {Helicobacter pylori} PDB: 3mle_A* 3qxh_A* 3qxj_A* 3qxs_A* 3qxx_A* 3qy0_A* 2qmo_A
Probab=96.44 E-value=0.012 Score=58.88 Aligned_cols=171 Identities=13% Similarity=0.143 Sum_probs=94.7
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccccCCCCCCCccccceEEEccCCccccCCCCcc----cc
Q 007533 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNY----ER 76 (599)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~dpyln~d~gtmsp~~hgevfv~~dg~e~dldlg~y----er 76 (599)
||-||||| .=++.||=++++.|.+.|+.+|++|...| | .+.|-. ..+| .|-|...+ .|
T Consensus 21 ~k~i~Itg-T~t~vGKT~vs~gL~~~L~~~G~~V~~fK--P-----------v~~g~~--~~~~--~~~D~~~~~~~~~~ 82 (242)
T 3qxc_A 21 GHMLFISA-TNTNAGKTTCARLLAQYCNACGVKTILLK--P-----------IETGVN--DAIN--HSSDAHLFLQDNRL 82 (242)
T ss_dssp CEEEEEEE-SSTTSSHHHHHHHHHHHHHHTTCCEEEEC--C-----------EECSCC--TTTC--CCSHHHHHHHHHHT
T ss_pred CcEEEEEe-CCCCCcHHHHHHHHHHHHHhCCCceEEEe--e-----------eecCCc--ccCC--CCchHHHHHHHHHH
Confidence 47889986 56999999999999999999999999988 2 222210 0001 22233333 34
Q ss_pred cc-CCCCCCCCcccchHhhHHHHhhhhcCCCCCCeeEEcccchHHHHHHHHHHhcccCCCCCCCCcEEEEeeCcccccc-
Q 007533 77 FM-DIKLTRDNNITTGKIYQSVIDKERKGDYLGKTVQVVPHITDEIQDWIERVAMIPVDGKEGPVDVCVIELGGTIGDI- 154 (599)
Q Consensus 77 fl-~~~l~~~~n~ttgkiy~~vi~ker~g~ylg~tvqviphit~~i~~~i~~~~~~p~d~~~~~~dv~i~e~ggtvgdi- 154 (599)
+. ++....-+-++--.-.+--+..++.|.+ +. ---++|++.+++++ .+.|++|||==|-+.+.
T Consensus 83 ~~~g~~~~~~~p~~~~~p~sp~~aa~~~g~~--~~-----i~~~~I~~~~~~l~--------~~~D~vlIEGagGl~~pl 147 (242)
T 3qxc_A 83 LDRSLTLKDISFYRYHKVSAPLIAQQEEDPN--AP-----IDTDNLTQRLHNFT--------KTYDLVIVEGAGGLCVPI 147 (242)
T ss_dssp TCTTCCHHHHCCEECSSSSCHHHHHHHHCTT--CC-----CCHHHHHHHHHHGG--------GTCSEEEEECCSCTTCBS
T ss_pred HhCCCChHHeeeEEECCCCChHHHHHHcCCC--Cc-----CCHHHHHHHHHHHH--------hcCCEEEEECCCCccccc
Confidence 33 2221000000000000111222333432 11 13478888888876 36899999976655542
Q ss_pred -ccchHHHHHHHhhhHcCCCCEEEEeeeeeeeecCC-CccccCCchhhhhhhhcCCCcccEEEEecC
Q 007533 155 -ESMPFIEALGQFSYRVGPGNFCLIHVSLVPVLNVV-GEQKTKPTQHSVRGLRGQGLTPNILACRST 219 (599)
Q Consensus 155 -es~pf~ea~rq~~~~~g~~n~~~ihv~~vp~~~~~-~e~ktkptq~sv~~Lrs~Gi~pd~iv~R~~ 219 (599)
+..-..+-++++... + |.+.... |- -.-|.-+++.|+..|+. .++|+-..
T Consensus 148 ~~~~~~adlA~~l~~p-----V-------ILV~~~~lg~--i~~~~lt~~~l~~~g~~-~GvIlN~v 199 (242)
T 3qxc_A 148 TLEENMLDFALKLKAK-----M-------LLISHDNLGL--INDCLLNDFLLKSHQLD-YKIAINLK 199 (242)
T ss_dssp SSSCBHHHHHHHHTCE-----E-------EEEECCSTTH--HHHHHHHHHHHHTSSSC-EEEEECCC
T ss_pred cccchHHHHHHHcCCC-----E-------EEEEcCCCcH--HHHHHHHHHHHHhCCCC-EEEEEeCC
Confidence 333445566665432 1 1122211 21 22466677888899999 88887543
No 45
>2vrn_A Protease I, DR1199; cysteine sulfenic acid, DJ-1/THIJ/PFPI superfamily, protease hydrolase, stress response; 2.15A {Deinococcus radiodurans}
Probab=96.27 E-value=0.012 Score=55.40 Aligned_cols=100 Identities=19% Similarity=0.214 Sum_probs=61.2
Q ss_pred ceEEEEEeecCCCcch-HHHHHHHHHHcCCcceeeeEEEEecCCCCCC------c--cccCCchhhhHHHHh--ccCCCE
Q 007533 295 PVRIAMVGKYTGLSDA-YLSILKALLHASVDLRKKLVIDWIPACDLED------A--TEKENPDAYKAAWKL--LKGADG 363 (599)
Q Consensus 295 ~v~IaiVGkY~~l~Da-Y~SIi~AL~haG~~~~v~v~i~wi~s~~le~------~--~~~~~p~~y~~a~~~--L~~~DG 363 (599)
..+|+++ -|....+. +....+.|+.+++++.+ ...+...+.. . ....+. .+ +. ..++|+
T Consensus 9 ~~~v~il-~~~g~~~~e~~~~~~~l~~ag~~v~~----vs~~~~~v~~~~~~~~~g~~v~~~~-~~----~~~~~~~~D~ 78 (190)
T 2vrn_A 9 GKKIAIL-AADGVEEIELTSPRAAIEAAGGTTEL----ISLEPGEIQSMKGDIEPQEKYRVDH-VV----SEVQVSDYDG 78 (190)
T ss_dssp TCEEEEE-CCTTCBHHHHHHHHHHHHHTTCEEEE----EESSSSEEEEEETTTEEEEEEECSE-EG----GGCCGGGCSE
T ss_pred CCEEEEE-eCCCCCHHHHHHHHHHHHHCCCEEEE----EecCCCccccccccccCCcEEeCCC-Ch----hhCChhhCCE
Confidence 4689988 46555432 55678889999876543 1111110100 0 000000 11 12 257899
Q ss_pred EEeCCCCCC----CchhHHHHHHHHHHHcCCCEEEEehhHHHHHH
Q 007533 364 ILVPGGFGN----RGVQGKILAAKYAREHRIPYLGICLGMQVAVI 404 (599)
Q Consensus 364 IlVPGGfG~----rg~eg~i~aik~are~~iP~LGICLGmQll~i 404 (599)
|+||||++. +..+..+..++.+.++++|+.+||.|-++|+-
T Consensus 79 livpGG~~~~~~~~~~~~l~~~l~~~~~~gk~i~aiC~G~~~La~ 123 (190)
T 2vrn_A 79 LLLPGGTVNPDKLRLEEGAMKFVRDMYDAGKPIAAICHGPWSLSE 123 (190)
T ss_dssp EEECCCTHHHHHHTTCHHHHHHHHHHHHTTCCEEEC-CTTHHHHH
T ss_pred EEECCCchhHHHHhhCHHHHHHHHHHHHcCCEEEEECHhHHHHHh
Confidence 999999742 23456778899998999999999999999863
No 46
>2rk3_A Protein DJ-1; parkinson'S disease, THIJ, PFPI, chaperone, cytoplasm, disease mutation, nucleus, oncogene, oxidation, parkinson disease; 1.05A {Homo sapiens} PDB: 1pdv_A 1pdw_A 3cy6_A 1pe0_A 3cza_A 3cyf_A 2rk4_A 3cz9_A* 3ezg_A 3f71_A 3sf8_A 1p5f_A 1ps4_A 1q2u_A 1soa_A 1ucf_A 2or3_A 3bwe_A 3b38_A 3b36_A ...
Probab=96.19 E-value=0.0081 Score=57.25 Aligned_cols=103 Identities=14% Similarity=0.104 Sum_probs=61.5
Q ss_pred eEEEEEeecCCCcch-HHHHHHHHHHcCCcceeeeEEEEecCC-CCCCc-cccCCch-hhhHHHHhccCCCEEEeCCCCC
Q 007533 296 VRIAMVGKYTGLSDA-YLSILKALLHASVDLRKKLVIDWIPAC-DLEDA-TEKENPD-AYKAAWKLLKGADGILVPGGFG 371 (599)
Q Consensus 296 v~IaiVGkY~~l~Da-Y~SIi~AL~haG~~~~v~v~i~wi~s~-~le~~-~~~~~p~-~y~~a~~~L~~~DGIlVPGGfG 371 (599)
.||+++ =|....+. +....+.|+.+++++.+ ...+.. .+... ...-.++ .+.++. ...++|+|+||||++
T Consensus 4 ~~v~il-l~~g~~~~e~~~~~~~l~~ag~~v~~----vs~~~~~~v~~~~g~~v~~d~~l~~~~-~~~~~D~livpGG~~ 77 (197)
T 2rk3_A 4 KRALVI-LAKGAEEMETVIPVDVMRRAGIKVTV----AGLAGKDPVQCSRDVVICPDASLEDAK-KEGPYDVVVLPGGNL 77 (197)
T ss_dssp CEEEEE-ECTTCCHHHHHHHHHHHHHTTCEEEE----EETTCSSCEECTTSCEECCSEEHHHHH-TTCCCSEEEECCCHH
T ss_pred CEEEEE-ECCCCcHHHHHHHHHHHHHCCCEEEE----EEcCCCCccccCCCCEEeCCcCHHHcC-CccCCCEEEECCCch
Confidence 478877 36555433 45678899999876543 111111 01100 0000010 111110 127899999999974
Q ss_pred CC----chhHHHHHHHHHHHcCCCEEEEehhHHHHHH
Q 007533 372 NR----GVQGKILAAKYAREHRIPYLGICLGMQVAVI 404 (599)
Q Consensus 372 ~r----g~eg~i~aik~are~~iP~LGICLGmQll~i 404 (599)
.. ..+..+..++.+.++++|+.+||-|-++|+-
T Consensus 78 ~~~~l~~~~~~~~~l~~~~~~gk~i~aiC~G~~~La~ 114 (197)
T 2rk3_A 78 GAQNLSESAAVKEILKEQENRKGLIATICAGPTALLA 114 (197)
T ss_dssp HHHHHHHCHHHHHHHHHHHHTTCEEEEETTTHHHHHH
T ss_pred hHHHhhhCHHHHHHHHHHHHcCCEEEEECHHHHHHHH
Confidence 22 2345778888888999999999999998863
No 47
>4hcj_A THIJ/PFPI domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta-alpha sandwich; HET: MSE; 1.12A {Brachyspira murdochii}
Probab=95.93 E-value=0.0056 Score=58.27 Aligned_cols=47 Identities=19% Similarity=0.118 Sum_probs=39.3
Q ss_pred ccCCCEEEeCCCCCCCc---hhHHHHHHHHHHHcCCCEEEEehhHHHHHH
Q 007533 358 LKGADGILVPGGFGNRG---VQGKILAAKYAREHRIPYLGICLGMQVAVI 404 (599)
Q Consensus 358 L~~~DGIlVPGGfG~rg---~eg~i~aik~are~~iP~LGICLGmQll~i 404 (599)
..++|+|+||||+|... .+..+..++.+.++++|+.+||-|-++|+-
T Consensus 67 ~~~yD~liiPGG~g~~~l~~~~~~~~~l~~~~~~~k~iaaIC~g~~~La~ 116 (177)
T 4hcj_A 67 AVEFDAVVFVGGIGCITLWDDWRTQGLAKLFLDNQKIVAGIGSGVVIMAN 116 (177)
T ss_dssp GGGCSEEEECCSGGGGGGTTCHHHHHHHHHHHHTTCEEEEETTHHHHHHH
T ss_pred HhHCCEEEECCCccHHHHhhCHHHHHHHHHHHHhCCEEEEecccHHHHHH
Confidence 45789999999988643 356788899999999999999999988853
No 48
>3of5_A Dethiobiotin synthetase; structural genomics, center for structural genomics of infec diseases, csgid, ligase; 1.52A {Francisella tularensis subsp}
Probab=95.91 E-value=0.018 Score=56.69 Aligned_cols=193 Identities=13% Similarity=0.151 Sum_probs=101.8
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccccCCCCCCCccccceEEEccCCccccCCCCccccccCC
Q 007533 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFMDI 80 (599)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~dpyln~d~gtmsp~~hgevfv~~dg~e~dldlg~yerfl~~ 80 (599)
||-||||| .=++.||=++++.|.+.|+.+|++|...| |.++|-.+ .+|| ..|-|.-. +..+.
T Consensus 4 mk~i~Itg-t~t~vGKT~vt~~L~~~l~~~G~~V~~~K-------------Pv~~g~~~-~~~~-~~~~D~~~--~~~~~ 65 (228)
T 3of5_A 4 MKKFFIIG-TDTEVGKTYISTKLIEVCEHQNIKSLCLK-------------PVASGQSQ-FSEL-CEDVESIL--NAYKH 65 (228)
T ss_dssp CEEEEEEE-SSSSSCHHHHHHHHHHHHHHTTCCEEEEC-------------SEEESBCS-SSSS-BHHHHHHH--HHTTT
T ss_pred CcEEEEEe-CCCCCCHHHHHHHHHHHHHHCCCeeEEec-------------ceeecCcc-CCCC-CChHHHHH--HhcCC
Confidence 78899986 56999999999999999999999999866 45555322 1222 21122211 22222
Q ss_pred CCCCCCcccchHhh----HHHHhhhhcCCCCCCeeEEcccchHHHHHHHHH-HhcccCCCCCCCCcEEEEeeCccccc--
Q 007533 81 KLTRDNNITTGKIY----QSVIDKERKGDYLGKTVQVVPHITDEIQDWIER-VAMIPVDGKEGPVDVCVIELGGTIGD-- 153 (599)
Q Consensus 81 ~l~~~~n~ttgkiy----~~vi~ker~g~ylg~tvqviphit~~i~~~i~~-~~~~p~d~~~~~~dv~i~e~ggtvgd-- 153 (599)
.++.++ + ..-.| +--+..++.|. +---+.|++.+++ ++ .++|++|||--|-+.+
T Consensus 66 ~~~~~~-~-~~~~~~~p~sp~~aa~~~~~---------~i~~~~i~~~~~~~l~--------~~~D~vlIEgaggl~~p~ 126 (228)
T 3of5_A 66 KFTAAE-I-NLISFNQAVAPHIIAAKTKV---------DISIENLKQFIEDKYN--------QDLDILFIEGAGGLLTPY 126 (228)
T ss_dssp SSCHHH-H-CSEEESSSSCHHHHHHHTTC---------CCCHHHHHHHHHGGGG--------SSCSEEEEEEEEETTCBS
T ss_pred CCChhh-E-EEEEECCCCCHHHHHHHcCC---------CCCHHHHHHHHHHHHH--------ccCCEEEEECCCcccccc
Confidence 211100 0 00011 00111122221 1123778888887 65 3789999996554433
Q ss_pred cccchHHHHHHHhhhHcCCCCEEEEeeeeeeeecCCCccccCCchhhhhhhhcCCCcccEEEEecCCC---CChhhhhcc
Q 007533 154 IESMPFIEALGQFSYRVGPGNFCLIHVSLVPVLNVVGEQKTKPTQHSVRGLRGQGLTPNILACRSTVA---LDDNVKGKL 230 (599)
Q Consensus 154 ies~pf~ea~rq~~~~~g~~n~~~ihv~~vp~~~~~~e~ktkptq~sv~~Lrs~Gi~pd~iv~R~~~~---l~~~~~~Ki 230 (599)
-+..-..+-++++... +++ +... +-..-.-+..+++.|+..|+..-++|.-...+ .....++.+
T Consensus 127 ~~~~~~adla~~l~~p-----viL-------V~~~-~~~~i~~~~~~~~~l~~~~~~i~GvIlN~~~~~~~~~~~~~~~l 193 (228)
T 3of5_A 127 SDHTTQLDLIKALQIP-----VLL-------VSAI-KVGCINHTLLTINELNRHNIKLAGWIANCNDSNIKYIDEQINTI 193 (228)
T ss_dssp SSSCBHHHHHHHHTCC-----EEE-------EEEC-STTHHHHHHHHHHHHHHTTCCEEEEEEEECCTTCSCHHHHHHHH
T ss_pred ccchhHHHHHHHcCCC-----EEE-------EEcC-CcchHHHHHHHHHHHHhCCCcEEEEEEECcCCcchhhHHHHHHH
Confidence 1233344555555321 222 1211 11112245667778888999888777754322 223344445
Q ss_pred ccCCCCCCCCeee
Q 007533 231 SQFCHVPEQNIIT 243 (599)
Q Consensus 231 slfc~v~~~~Vi~ 243 (599)
.-.+.++-=.+|-
T Consensus 194 ~~~~g~pvLG~iP 206 (228)
T 3of5_A 194 EELSGYKCSAKIS 206 (228)
T ss_dssp HHHHSCCCSEEEE
T ss_pred HHhhCCCEEEECC
Confidence 4444554444433
No 49
>4e08_A DJ-1 beta; flavodoxin-like fold, stress response, motor protein; 2.00A {Drosophila melanogaster}
Probab=95.91 E-value=0.015 Score=55.06 Aligned_cols=101 Identities=11% Similarity=0.089 Sum_probs=59.7
Q ss_pred eEEEEEeecCCCcch-HHHHHHHHHHcCCcceeeeEEEEecC-CCCCCc---cccCCchhhhHHHHhccCCCEEEeCCCC
Q 007533 296 VRIAMVGKYTGLSDA-YLSILKALLHASVDLRKKLVIDWIPA-CDLEDA---TEKENPDAYKAAWKLLKGADGILVPGGF 370 (599)
Q Consensus 296 v~IaiVGkY~~l~Da-Y~SIi~AL~haG~~~~v~v~i~wi~s-~~le~~---~~~~~p~~y~~a~~~L~~~DGIlVPGGf 370 (599)
.||+++ =+..+.+. +....+.|+.+|+++.+ ...+. ..+... ....+. .+.+ -....+|.|+||||+
T Consensus 6 kkv~il-l~~g~~~~e~~~~~~~l~~ag~~v~~----~s~~~~~~v~~~~g~~i~~d~-~l~~--~~~~~~D~livpGG~ 77 (190)
T 4e08_A 6 KSALVI-LAPGAEEMEFIIAADVLRRAGIKVTV----AGLNGGEAVKCSRDVQILPDT-SLAQ--VASDKFDVVVLPGGL 77 (190)
T ss_dssp CEEEEE-ECTTCCHHHHHHHHHHHHHTTCEEEE----EESSSSSCEECTTSCEEECSE-ETGG--GTTCCCSEEEECCCH
T ss_pred cEEEEE-ECCCchHHHHHHHHHHHHHCCCEEEE----EECCCCcceecCCCcEEECCC-CHHH--CCcccCCEEEECCCC
Confidence 467776 34444332 55678999999876543 11111 111100 000000 0111 012468999999995
Q ss_pred C-CC---chhHHHHHHHHHHHcCCCEEEEehhHHHHHH
Q 007533 371 G-NR---GVQGKILAAKYAREHRIPYLGICLGMQVAVI 404 (599)
Q Consensus 371 G-~r---g~eg~i~aik~are~~iP~LGICLGmQll~i 404 (599)
+ .. ..+..+..++.+.++++|+.+||-|-++|+-
T Consensus 78 ~~~~~~~~~~~~~~~l~~~~~~~k~i~aiC~G~~~La~ 115 (190)
T 4e08_A 78 GGSNAMGESSLVGDLLRSQESGGGLIAAICAAPTVLAK 115 (190)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHTTCEEEEETTTHHHHHH
T ss_pred hHHHHhhhCHHHHHHHHHHHHCCCEEEEECHHHHHHHH
Confidence 3 22 2245778889999999999999999999863
No 50
>2ab0_A YAJL; DJ-1/THIJ superfamily, alpha-beta hydrolase fold, unknown function; 1.10A {Escherichia coli} SCOP: c.23.16.2
Probab=95.73 E-value=0.015 Score=56.02 Aligned_cols=100 Identities=12% Similarity=0.117 Sum_probs=60.2
Q ss_pred eEEEEEeecCCCcch-HHHHHHHHHHcCCcceeeeEEEEecCC---CCCCc---cccCCchhhhHHHHhccCCCEEEeCC
Q 007533 296 VRIAMVGKYTGLSDA-YLSILKALLHASVDLRKKLVIDWIPAC---DLEDA---TEKENPDAYKAAWKLLKGADGILVPG 368 (599)
Q Consensus 296 v~IaiVGkY~~l~Da-Y~SIi~AL~haG~~~~v~v~i~wi~s~---~le~~---~~~~~p~~y~~a~~~L~~~DGIlVPG 368 (599)
.||+++ =|....+. .....+.|+.+|+++.+ ...+.. .+... ....+ ..+.+ -...++|+|+|||
T Consensus 3 ~kV~il-l~~g~~~~e~~~~~~~l~~ag~~v~~----vs~~~~~~~~v~~~~g~~v~~~-~~l~~--~~~~~~D~livpG 74 (205)
T 2ab0_A 3 ASALVC-LAPGSEETEAVTTIDLLVRGGIKVTT----ASVASDGNLAITCSRGVKLLAD-APLVE--VADGEYDVIVLPG 74 (205)
T ss_dssp CEEEEE-ECTTCCHHHHHHHHHHHHHTTCEEEE----EECSSTTCCEEECTTSCEEECS-EEHHH--HTTSCCSEEEECC
T ss_pred cEEEEE-EcCCCcHHHHHHHHHHHHHCCCEEEE----EeCCCCCCceeecCCCeEEecC-CCHHH--CCcccCCEEEECC
Confidence 367777 35544332 45678899999876543 121111 01000 00001 01111 1136899999999
Q ss_pred CCCCC----chhHHHHHHHHHHHcCCCEEEEehhH-HHHH
Q 007533 369 GFGNR----GVQGKILAAKYAREHRIPYLGICLGM-QVAV 403 (599)
Q Consensus 369 GfG~r----g~eg~i~aik~are~~iP~LGICLGm-Qll~ 403 (599)
|++.. ..+..+..++.+.++++|+.+||-|- ++|+
T Consensus 75 G~~~~~~l~~~~~l~~~l~~~~~~gk~i~aiC~G~~~lLa 114 (205)
T 2ab0_A 75 GIKGAECFRDSTLLVETVKQFHRSGRIVAAICAAPATVLV 114 (205)
T ss_dssp CHHHHHHHHHCHHHHHHHHHHHHTTCEEEEETHHHHHHTT
T ss_pred CcccHHHhccCHHHHHHHHHHHHcCCEEEEECHhHHHHHH
Confidence 97532 23457788888889999999999999 8875
No 51
>3er6_A Putative transcriptional regulator protein; structural genomics, unknown function, DNA-binding, transcription regulation, PSI-2; 1.90A {Vibrio parahaemolyticus}
Probab=95.66 E-value=0.019 Score=55.65 Aligned_cols=105 Identities=12% Similarity=0.040 Sum_probs=62.6
Q ss_pred CceEEEEEeecCCCcch-HHHHHHHHHHcCCcce-eeeEEEEecCCC--CCCc---cccCCchhhhHHHHhccCCCEEEe
Q 007533 294 EPVRIAMVGKYTGLSDA-YLSILKALLHASVDLR-KKLVIDWIPACD--LEDA---TEKENPDAYKAAWKLLKGADGILV 366 (599)
Q Consensus 294 ~~v~IaiVGkY~~l~Da-Y~SIi~AL~haG~~~~-v~v~i~wi~s~~--le~~---~~~~~p~~y~~a~~~L~~~DGIlV 366 (599)
...+|+++ =|....+. +...++.|..++.... -..++..+..+. +... ....+. ..+.+.++|.|+|
T Consensus 7 ~~~~v~il-l~~g~~~~e~~~~~d~l~~a~~~~~~~~~~v~~vs~~~~~v~~~~G~~v~~d~-----~~~~~~~~D~liv 80 (209)
T 3er6_A 7 KNLRVVAL-APTGRYFASIISSLEILETAAEFAEFQGFMTHVVTPNNRPLIGRGGISVQPTA-----QWQSFDFTNILII 80 (209)
T ss_dssp CCEEEEEE-CCCTTSCHHHHHHHHHHHHHHHHTTCSCEEEEEECTTSSCEEETTTEEEECSS-----CGGGCSCCSEEEE
T ss_pred CCeEEEEE-EeCCCCHHHHHHHHHHHHHHHhhcCCCCcEEEEEeCCCCceecCCCeEEeCCc-----CccccCCCCEEEE
Confidence 45688888 46666544 5567788877651100 001122232211 1100 000010 1134578999999
Q ss_pred CCCCCCC-----chhHHHHHHHHHHHcCCCEEEEehhHHHHHH
Q 007533 367 PGGFGNR-----GVQGKILAAKYAREHRIPYLGICLGMQVAVI 404 (599)
Q Consensus 367 PGGfG~r-----g~eg~i~aik~are~~iP~LGICLGmQll~i 404 (599)
|||.+.. ..+..+..++.+.++++++.+||-|-.+|+-
T Consensus 81 pGg~~~~~~~~~~~~~l~~~l~~~~~~g~~iaaIC~G~~~La~ 123 (209)
T 3er6_A 81 GSIGDPLESLDKIDPALFDWIRELHLKGSKIVAIDTGIFVVAK 123 (209)
T ss_dssp CCCSCHHHHGGGSCHHHHHHHHHHHHTTCEEEEETTHHHHHHH
T ss_pred CCCCCchhhhccCCHHHHHHHHHHHhcCCEEEEEcHHHHHHHH
Confidence 9997642 2456788899999999999999999988864
No 52
>1hyq_A MIND, cell division inhibitor (MIND-1); MINC, FTSZ, bacterial cell division, cell cycle; 2.60A {Archaeoglobus fulgidus} SCOP: c.37.1.10
Probab=95.43 E-value=0.092 Score=51.30 Aligned_cols=41 Identities=29% Similarity=0.453 Sum_probs=37.1
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccc
Q 007533 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPY 42 (599)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~dpy 42 (599)
||.|.|+++ -.|.||=.+|+.++..|..+|++|..+..||.
T Consensus 2 ~~~I~v~s~-kgGvGKTt~a~~LA~~la~~g~~VlliD~D~~ 42 (263)
T 1hyq_A 2 VRTITVASG-KGGTGKTTITANLGVALAQLGHDVTIVDADIT 42 (263)
T ss_dssp CEEEEEEES-SSCSCHHHHHHHHHHHHHHTTCCEEEEECCCS
T ss_pred CeEEEEECC-CCCCCHHHHHHHHHHHHHhCCCcEEEEECCCC
Confidence 478888875 57999999999999999999999999999985
No 53
>3l3b_A ES1 family protein; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography, isopr biosynthesis; 1.90A {Ehrlichia chaffeensis}
Probab=95.39 E-value=0.013 Score=58.64 Aligned_cols=47 Identities=21% Similarity=0.313 Sum_probs=39.5
Q ss_pred cCCCEEEeCCCCCC---------------CchhHHHHHHHHHHHcCCCEEEEehhHHHHHHH
Q 007533 359 KGADGILVPGGFGN---------------RGVQGKILAAKYAREHRIPYLGICLGMQVAVIE 405 (599)
Q Consensus 359 ~~~DGIlVPGGfG~---------------rg~eg~i~aik~are~~iP~LGICLGmQll~ie 405 (599)
.++|+|+||||+|. +..+.....++.+.++++|+.+||-|-.+|+-+
T Consensus 106 ~~~D~livPGG~~~~~~L~~~~~~~~~~~~~~~~l~~~lr~~~~~gk~IaaIC~G~~~La~a 167 (242)
T 3l3b_A 106 EEFDMLVIPGGYGVAKNFSNLFDEDKENDYILPEFKNAVREFYNAKKPIGAVCISPAVVVAL 167 (242)
T ss_dssp GGCSEEEECCCHHHHHHHBSTTSCC--CCCBCHHHHHHHHHHHHTTCCEEEETTHHHHHHHH
T ss_pred ccCCEEEEcCCcchhhhhhhhhccccccccCCHHHHHHHHHHHHcCCEEEEECHHHHHHHHh
Confidence 57899999999863 233667888999999999999999999998754
No 54
>3fgn_A Dethiobiotin synthetase; biotin biosynthesis, BIOD, ATP-BIND ligase, magnesium, nucleotide-binding; 1.85A {Mycobacterium tuberculosis} PDB: 3fmf_A* 3fmi_A* 3fpa_A*
Probab=95.14 E-value=0.044 Score=54.96 Aligned_cols=167 Identities=19% Similarity=0.214 Sum_probs=89.5
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccccCCCCCCCccccceEEEccCCccccCCCCccccccCC
Q 007533 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFMDI 80 (599)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~dpyln~d~gtmsp~~hgevfv~~dg~e~dldlg~yerfl~~ 80 (599)
||-||||| .=|+.||=++++.|.+.|+.+|++|...| |.+.|-. .|+ -|.....+..+.
T Consensus 26 m~~i~Itg-t~t~vGKT~vt~gL~~~l~~~G~~V~~fK-------------Pv~~g~~---~~~----~D~~~~~~~~g~ 84 (251)
T 3fgn_A 26 MTILVVTG-TGTGVGKTVVCAALASAARQAGIDVAVCK-------------PVQTGTA---RGD----DDLAEVGRLAGV 84 (251)
T ss_dssp CEEEEEEE-SSTTSCHHHHHHHHHHHHHHTTCCEEEEE-------------EEECCGG---GTC----CHHHHHHHHHCC
T ss_pred CCEEEEEe-CCCCCcHHHHHHHHHHHHHHCCCeEEEEe-------------eeecCCC---CCC----HHHHHHHHHcCC
Confidence 67888885 67999999999999999999999999988 2233210 111 222222333322
Q ss_pred CCCCCCcccchHhhHHHHhhhhcCCCCCCeeEEcccchHHHHHHHHHHhcccCCCCCCCCcEEEEeeCcccccc--cc-c
Q 007533 81 KLTRDNNITTGKIYQSVIDKERKGDYLGKTVQVVPHITDEIQDWIERVAMIPVDGKEGPVDVCVIELGGTIGDI--ES-M 157 (599)
Q Consensus 81 ~l~~~~n~ttgkiy~~vi~ker~g~ylg~tvqviphit~~i~~~i~~~~~~p~d~~~~~~dv~i~e~ggtvgdi--es-~ 157 (599)
... .|-++--.-.+--+..++.|.. +---++|++.+++.+ .++|++|||==|-+.|- +. .
T Consensus 85 ~~~-~~~~~~~~p~sP~~aa~~~~~~--------~~~~~~i~~~~~~l~--------~~~D~vlIEGagGl~~pl~~~~~ 147 (251)
T 3fgn_A 85 TQL-AGLARYPQPMAPAAAAEHAGMA--------LPARDQIVRLIADLD--------RPGRLTLVEGAGGLLVELAEPGV 147 (251)
T ss_dssp CEE-EEEEECSSSSCHHHHHHHTTCC--------CCCHHHHHHHHHTTC--------CTTCEEEEECSSSTTCEEETTTE
T ss_pred CCC-CCCeeECCCCChHHHHHHcCCC--------CCCHHHHHHHHHHHH--------hcCCEEEEECCCCCcCCcCcccc
Confidence 111 0000000000111122222220 011356788777764 47899999975555431 11 2
Q ss_pred hHHHHHHHhhhHcCCCCEEEEeeeeeeeecCCCccccCCchhhhhhhhcCCCcccEEEEec
Q 007533 158 PFIEALGQFSYRVGPGNFCLIHVSLVPVLNVVGEQKTKPTQHSVRGLRGQGLTPNILACRS 218 (599)
Q Consensus 158 pf~ea~rq~~~~~g~~n~~~ihv~~vp~~~~~~e~ktkptq~sv~~Lrs~Gi~pd~iv~R~ 218 (599)
-..+-++++... ++ .+... +.---.-+.-+++.|+..|+..-++|+-.
T Consensus 148 ~~adla~~l~~p-----VI-------LV~~~-~~g~i~~~~lt~~~l~~~g~~i~GvIlN~ 195 (251)
T 3fgn_A 148 TLRDVAVDVAAA-----AL-------VVVTA-DLGTLNHTKLTLEALAAQQVSCAGLVIGS 195 (251)
T ss_dssp EHHHHHHHTTCE-----EE-------EEECS-STTHHHHHHHHHHHHHHTTCCEEEEEEEE
T ss_pred hHHHHHHHcCCC-----EE-------EEEcC-CCccHHHHHHHHHHHHhCCCCEEEEEEEC
Confidence 333444544321 11 12222 11112235667778888999999888854
No 55
>1xjc_A MOBB protein homolog; structural genomics, midwest center for structural GEN PSI, protein structure initiative, MCSG; 2.10A {Geobacillus stearothermophilus} SCOP: c.37.1.10
Probab=95.11 E-value=0.023 Score=53.79 Aligned_cols=44 Identities=20% Similarity=0.071 Sum_probs=36.4
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccc-ccCC
Q 007533 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPY-LNTD 46 (599)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~dpy-ln~d 46 (599)
|+.|.++| .||-||-.++..|-..|+.+|++|..+|.||. .++|
T Consensus 4 ~~~i~i~G--~sGsGKTTl~~~L~~~l~~~g~~v~~ik~~~~~~diD 48 (169)
T 1xjc_A 4 MNVWQVVG--YKHSGKTTLMEKWVAAAVREGWRVGTVKHHGHGGEPA 48 (169)
T ss_dssp CCEEEEEC--CTTSSHHHHHHHHHHHHHHTTCCEEEEECCC------
T ss_pred CEEEEEEC--CCCCCHHHHHHHHHHhhHhcCCeeeEEEeCCCCcccc
Confidence 57788898 78999999999999999999999999999997 5666
No 56
>3cne_A Putative protease I; structural genomics, PSI-2, MCSG, protein struct initiative, midwest center for structural genomics; HET: FMN; 1.99A {Bacteroides thetaiotaomicron vpi-5482}
Probab=94.87 E-value=0.019 Score=53.41 Aligned_cols=46 Identities=15% Similarity=0.097 Sum_probs=37.6
Q ss_pred cCCCEEEeCCC--C-CCC------chhHHHHHHHHHHHcCCCEEEEehhHHHHHH
Q 007533 359 KGADGILVPGG--F-GNR------GVQGKILAAKYAREHRIPYLGICLGMQVAVI 404 (599)
Q Consensus 359 ~~~DGIlVPGG--f-G~r------g~eg~i~aik~are~~iP~LGICLGmQll~i 404 (599)
.++|.|+|||| + +.. ..+.....++.+.++++|+.+||.|-++|+-
T Consensus 65 ~~~D~livpGG~~~~~~~~l~~~~~~~~~~~~l~~~~~~gk~i~aiC~G~~~La~ 119 (175)
T 3cne_A 65 DEFDALVFSCGDAVPVFQQYANQPYNVDLMEVIKTFGEKGKMMIGHCAGAMMFDF 119 (175)
T ss_dssp GGCSEEEEECCTTGGGGGGCTTCHHHHHHHHHHHHHHHTTCEEEEETTHHHHHHH
T ss_pred ccCCEEEECCCcCcccHHHHhhcccCHHHHHHHHHHHHCCCEEEEECHHHHHHHH
Confidence 67899999999 6 542 2345778888888999999999999998864
No 57
>2ph1_A Nucleotide-binding protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Archaeoglobus fulgidus dsm 4304} PDB: 3kb1_A*
Probab=94.84 E-value=0.21 Score=49.20 Aligned_cols=42 Identities=21% Similarity=0.274 Sum_probs=37.7
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccc
Q 007533 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYL 43 (599)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~dpyl 43 (599)
+|-|.|+++ -.|.||=.+|+.++..|..+|+||-.+..||.-
T Consensus 18 ~~vI~v~s~-kGGvGKTT~a~nLA~~la~~G~~VlliD~D~~~ 59 (262)
T 2ph1_A 18 KSRIAVMSG-KGGVGKSTVTALLAVHYARQGKKVGILDADFLG 59 (262)
T ss_dssp SCEEEEECS-SSCTTHHHHHHHHHHHHHHTTCCEEEEECCSSC
T ss_pred CeEEEEEcC-CCCCCHHHHHHHHHHHHHHCCCeEEEEeCCCCC
Confidence 467788776 479999999999999999999999999999986
No 58
>3ej6_A Catalase-3; heme, hydrogen iron, metal-binding, oxidoreductase, peroxidase; HET: NAG HEM; 2.30A {Neurospora crassa}
Probab=94.79 E-value=0.1 Score=59.34 Aligned_cols=97 Identities=12% Similarity=0.087 Sum_probs=62.9
Q ss_pred CceEEEEEeecCCCcc-hHHHHHHHHHHcCCcceeeeEEEEecCCCCCCccccCCchhhhHHHHhccCCCEEEeCCCCCC
Q 007533 294 EPVRIAMVGKYTGLSD-AYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGN 372 (599)
Q Consensus 294 ~~v~IaiVGkY~~l~D-aY~SIi~AL~haG~~~~v~v~i~wi~s~~le~~~~~~~p~~y~~a~~~L~~~DGIlVPGGfG~ 372 (599)
.+.||||+-.=+...+ ....+.++|+.+|+.+.+ |... ... ... ..|.. .....+|+|+||||...
T Consensus 536 ~grKVaILvadG~fE~~El~~p~~aL~~aGa~V~v------Vsp~-~g~-GvD---~t~~~--~~s~~fDAVvlPGG~~~ 602 (688)
T 3ej6_A 536 ATLRVGVLSTTKGGSLDKAKALKEQLEKDGLKVTV------IAEY-LAS-GVD---QTYSA--ADATAFDAVVVAEGAER 602 (688)
T ss_dssp TTCEEEEECCSSSSHHHHHHHHHHHHHHTTCEEEE------EESS-CCT-TCC---EETTT--CCGGGCSEEEECTTCCT
T ss_pred cCCEEEEEccCCCccHHHHHHHHHHHHHCCCEEEE------EeCC-CCC-Ccc---cCccc--CChhcCcEEEECCCccc
Confidence 3468988721111222 467899999999998865 2221 110 000 01111 11357899999999532
Q ss_pred -----------CchhHHHHHHHHHHHcCCCEEEEehhHHHHH
Q 007533 373 -----------RGVQGKILAAKYAREHRIPYLGICLGMQVAV 403 (599)
Q Consensus 373 -----------rg~eg~i~aik~are~~iP~LGICLGmQll~ 403 (599)
+.....+..++.+.++++|+-.||-|-|+|.
T Consensus 603 ~~~~~~~~d~Lr~~~~a~~fV~e~~~hgKpIAAIchgp~lL~ 644 (688)
T 3ej6_A 603 VFSGKGAMSPLFPAGRPSQILTDGYRWGKPVAAVGSAKKALQ 644 (688)
T ss_dssp TTSTTTTCCTTSCTTHHHHHHHHHHHTTCCEEEEGGGHHHHH
T ss_pred ccccccchhhhccCHHHHHHHHHHHHcCCEEEEeCccHHHHH
Confidence 2335678899999999999999999999995
No 59
>3uk7_A Class I glutamine amidotransferase-like domain-CO protein; rossmann fold, cytosol; 2.05A {Arabidopsis thaliana}
Probab=94.68 E-value=0.062 Score=56.68 Aligned_cols=47 Identities=21% Similarity=0.300 Sum_probs=38.8
Q ss_pred ccCCCEEEeCCCCCCC---chhHHHHHHHHHHHcCCCEEEEehhHHHHHH
Q 007533 358 LKGADGILVPGGFGNR---GVQGKILAAKYAREHRIPYLGICLGMQVAVI 404 (599)
Q Consensus 358 L~~~DGIlVPGGfG~r---g~eg~i~aik~are~~iP~LGICLGmQll~i 404 (599)
..++|.|+||||++.. ..+..+..++.+.++++|+.+||-|-++|+-
T Consensus 280 ~~~~D~livpGg~~~~~~~~~~~~~~~l~~~~~~~~~i~aiC~g~~~La~ 329 (396)
T 3uk7_A 280 SSSYDALVIPGGRAPEYLALNEHVLNIVKEFMNSEKPVASICHGQQILAA 329 (396)
T ss_dssp GGGCSEEEECCBSHHHHHTTCHHHHHHHHHHHHTTCCEEEEGGGHHHHHH
T ss_pred cccCCEEEECCCcchhhhccCHHHHHHHHHHHHCCCEEEEEchHHHHHHH
Confidence 3579999999998642 2355778899999999999999999999864
No 60
>3f5d_A Protein YDEA; unknow protein, PSI-II, nysgrc, structural genomics, protein structure initiative; 2.06A {Bacillus subtilis}
Probab=94.68 E-value=0.044 Score=53.09 Aligned_cols=46 Identities=17% Similarity=0.173 Sum_probs=38.2
Q ss_pred cCCCEEEeCCCCCCC-chhHHHHHHHHHHHcCCCEEEEehhHHHHHH
Q 007533 359 KGADGILVPGGFGNR-GVQGKILAAKYAREHRIPYLGICLGMQVAVI 404 (599)
Q Consensus 359 ~~~DGIlVPGGfG~r-g~eg~i~aik~are~~iP~LGICLGmQll~i 404 (599)
.++|.|+||||.|.. ..+..+..++.+.++++|+.+||-|-++|+-
T Consensus 62 ~~~D~livpGG~~~~~~~~~l~~~l~~~~~~gk~iaaiC~G~~~La~ 108 (206)
T 3f5d_A 62 ANFNLLVMIGGDSWSNDNKKLLHFVKTAFQKNIPIAAICGAVDFLAK 108 (206)
T ss_dssp SCCSEEEECCBSCCCCCCHHHHHHHHHHHHTTCCEEEETHHHHHHHH
T ss_pred cCCCEEEEcCCCChhhcCHHHHHHHHHHHHcCCEEEEECHHHHHHHH
Confidence 478999999998654 3345778889888999999999999999853
No 61
>3k9g_A PF-32 protein; ssgcid, SBRI, decode biostructures, UW, NIH, niaid, borellia burgdorferi, plasmid partition protein, iodide; 2.25A {Borrelia burgdorferi} PDB: 3k9h_A
Probab=94.68 E-value=0.08 Score=52.06 Aligned_cols=42 Identities=24% Similarity=0.305 Sum_probs=37.1
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccccc
Q 007533 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLN 44 (599)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~dpyln 44 (599)
||.|.|+++ -.|.||=.+|+.++..|. +|+||-.+.+||.-|
T Consensus 27 ~~vI~v~s~-kGGvGKTT~a~~LA~~la-~g~~VlliD~D~~~~ 68 (267)
T 3k9g_A 27 PKIITIASI-KGGVGKSTSAIILATLLS-KNNKVLLIDMDTQAS 68 (267)
T ss_dssp CEEEEECCS-SSSSCHHHHHHHHHHHHT-TTSCEEEEEECTTCH
T ss_pred CeEEEEEeC-CCCchHHHHHHHHHHHHH-CCCCEEEEECCCCCC
Confidence 467777766 589999999999999999 999999999999754
No 62
>1vhq_A Enhancing lycopene biosynthesis protein 2; structural genomics, unknown function; 1.65A {Escherichia coli} SCOP: c.23.16.2 PDB: 1oy1_A
Probab=94.56 E-value=0.02 Score=56.12 Aligned_cols=47 Identities=21% Similarity=0.279 Sum_probs=39.0
Q ss_pred cCCCEEEeCCCCCCC--------------chhHHHHHHHHHHHcCCCEEEEehhHHHHHHH
Q 007533 359 KGADGILVPGGFGNR--------------GVQGKILAAKYAREHRIPYLGICLGMQVAVIE 405 (599)
Q Consensus 359 ~~~DGIlVPGGfG~r--------------g~eg~i~aik~are~~iP~LGICLGmQll~ie 405 (599)
.++|+|+||||+|.. ..+.....++.+.++++|+.+||-|-++|+-+
T Consensus 89 ~~~D~livpGG~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~gk~vaaIC~G~~~La~a 149 (232)
T 1vhq_A 89 AELDALIVPGGFGAAKNLSNFASLGSECTVDRELKALAQAMHQAGKPLGFMCIAPAMLPKI 149 (232)
T ss_dssp GGCSEEEECCSTHHHHTSBCHHHHGGGCCBCHHHHHHHHHHHHTTCCEEEETTGGGGHHHH
T ss_pred ccCCEEEECCCcchHHHHhhhhccccccccCHHHHHHHHHHHHcCCEEEEECHHHHHHHHH
Confidence 579999999998741 13557888999999999999999999998644
No 63
>2fex_A Conserved hypothetical protein; structural genomics, protein structure initiative, PSI, MIDW center for structural genomics, MCSG; 1.70A {Agrobacterium tumefaciens} SCOP: c.23.16.2
Probab=94.55 E-value=0.017 Score=54.49 Aligned_cols=46 Identities=20% Similarity=0.203 Sum_probs=37.4
Q ss_pred cCCCEEEeCCCCCC--CchhHHHHHHHHHHHcCCCEEEEehhHHHHHH
Q 007533 359 KGADGILVPGGFGN--RGVQGKILAAKYAREHRIPYLGICLGMQVAVI 404 (599)
Q Consensus 359 ~~~DGIlVPGGfG~--rg~eg~i~aik~are~~iP~LGICLGmQll~i 404 (599)
.++|+|+||||.+. +..+..+..++.+.++++|+.+||-|-++|+-
T Consensus 62 ~~~D~livpGG~~~~~~~~~~l~~~l~~~~~~~k~i~aiC~G~~~La~ 109 (188)
T 2fex_A 62 VDIDALVIPGGLSWEKGTAADLGGLVKRFRDRDRLVAGICAAASALGG 109 (188)
T ss_dssp TTCSEEEECCBSHHHHTCCCCCHHHHHHHHHTTCEEEEETHHHHHHHH
T ss_pred ccCCEEEECCCCcccccccHHHHHHHHHHHHCCCEEEEECHHHHHHHH
Confidence 37899999999753 22345678889999999999999999999863
No 64
>2xj4_A MIPZ; replication, cell division, ATPase, WACA; 1.60A {Caulobacter vibrioides} PDB: 2xj9_A* 2xit_A
Probab=94.40 E-value=0.26 Score=49.26 Aligned_cols=40 Identities=25% Similarity=0.329 Sum_probs=35.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccc
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPY 42 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~dpy 42 (599)
|-|.|+++ -.|.||=.+|+.++..|..+|+||-.+..||+
T Consensus 5 kvI~v~s~-KGGvGKTT~a~nLA~~La~~G~~VlliD~D~~ 44 (286)
T 2xj4_A 5 RVIVVGNE-KGGAGKSTIAVHLVTALLYGGAKVAVIDLDLR 44 (286)
T ss_dssp EEEEECCS-SSCTTHHHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred eEEEEEcC-CCCCCHHHHHHHHHHHHHHCCCcEEEEECCCC
Confidence 56777654 58899999999999999999999999999994
No 65
>3uk7_A Class I glutamine amidotransferase-like domain-CO protein; rossmann fold, cytosol; 2.05A {Arabidopsis thaliana}
Probab=94.31 E-value=0.063 Score=56.64 Aligned_cols=48 Identities=23% Similarity=0.353 Sum_probs=39.1
Q ss_pred ccCCCEEEeCCCCCCC---chhHHHHHHHHHHHcCCCEEEEehhHHHHHHH
Q 007533 358 LKGADGILVPGGFGNR---GVQGKILAAKYAREHRIPYLGICLGMQVAVIE 405 (599)
Q Consensus 358 L~~~DGIlVPGGfG~r---g~eg~i~aik~are~~iP~LGICLGmQll~ie 405 (599)
...+|.|+||||++.. ..+..+..++.+.++++|+.+||-|-++|+-+
T Consensus 87 ~~~~D~livpGG~~~~~~~~~~~~~~~l~~~~~~~~~i~aiC~G~~~La~a 137 (396)
T 3uk7_A 87 LSKYDGLVIPGGRAPEYLALTASVVELVKEFSRSGKPIASICHGQLILAAA 137 (396)
T ss_dssp GGGCSEEEECCBSHHHHHTTCHHHHHHHHHHHHTTCCEEEETTTHHHHHHT
T ss_pred cccCCEEEECCCcchhhcccCHHHHHHHHHHHHcCCEEEEECchHHHHHhc
Confidence 3678999999997642 23557788899999999999999999998643
No 66
>3en0_A Cyanophycinase; serine protease, beta peptide specific, hydrolase, protease; 1.50A {Synechocystis SP}
Probab=94.30 E-value=0.06 Score=55.33 Aligned_cols=109 Identities=13% Similarity=0.064 Sum_probs=68.1
Q ss_pred HHHHHHHhhhcCCCCceEEEEEeecCC-CcchHH-HHHHHHHHcCCcceeeeEEEEecCCCCCCccccCCchhhhHHHHh
Q 007533 280 KEWTSRAEICDGLHEPVRIAMVGKYTG-LSDAYL-SILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKL 357 (599)
Q Consensus 280 ~~W~~l~~~~~~~~~~v~IaiVGkY~~-l~DaY~-SIi~AL~haG~~~~v~v~i~wi~s~~le~~~~~~~p~~y~~a~~~ 357 (599)
.-|+.|++.... ...+|+++- +-. ..+.|. .+.++++..|++. +. +++-.+.+. ..+| +..+.
T Consensus 43 ~i~~~~v~lagg--~~~~I~~Ip-tAs~~~~~~~~~~~~~f~~lG~~~---v~--~L~i~~r~~---a~~~----~~~~~ 107 (291)
T 3en0_A 43 EILQTFWSRSGG--NDAIIGIIP-SASREPLLIGERYQTIFSDMGVKE---LK--VLDIRDRAQ---GDDS----GYRLF 107 (291)
T ss_dssp HHHHHHHHHTTG--GGCEEEEEC-TTCSSHHHHHHHHHHHHHHHCCSE---EE--ECCCCSGGG---GGCH----HHHHH
T ss_pred HHHHHHHHHcCC--CCCeEEEEe-CCCCChHHHHHHHHHHHHHcCCCe---eE--EEEecCccc---cCCH----HHHHH
Confidence 346667766542 247999994 532 233444 5677888888842 11 122211111 0111 12356
Q ss_pred ccCCCEEEeCCCCCCC-----chhHHHHHHHHHHHcC-CCEEEEehhHHHHH
Q 007533 358 LKGADGILVPGGFGNR-----GVQGKILAAKYAREHR-IPYLGICLGMQVAV 403 (599)
Q Consensus 358 L~~~DGIlVPGGfG~r-----g~eg~i~aik~are~~-iP~LGICLGmQll~ 403 (599)
+.++|+|+++||--.+ .-.+...+++.+.+++ +|+.|.|.|.-+++
T Consensus 108 l~~ad~I~v~GGnt~~l~~~l~~t~l~~~L~~~~~~G~~~~~GtSAGA~i~~ 159 (291)
T 3en0_A 108 VEQCTGIFMTGGDQLRLCGLLADTPLMDRIRQRVHNGEISLAGTSAGAAVMG 159 (291)
T ss_dssp HHHCSEEEECCSCHHHHHHHHTTCHHHHHHHHHHHTTSSEEEEETHHHHTTS
T ss_pred HhcCCEEEECCCCHHHHHHHHHhCCHHHHHHHHHHCCCeEEEEeCHHHHhhh
Confidence 8899999999974322 1246788899999999 99999999998873
No 67
>3efe_A THIJ/PFPI family protein; structural GEN csgid, center for structural genomics of infectious disease chaperone; 2.30A {Bacillus anthracis}
Probab=94.24 E-value=0.06 Score=52.05 Aligned_cols=46 Identities=17% Similarity=0.091 Sum_probs=38.3
Q ss_pred cCCCEEEeCCCCCCC--chhHHHHHHHHHHHcCCCEEEEehhHHHHHH
Q 007533 359 KGADGILVPGGFGNR--GVQGKILAAKYAREHRIPYLGICLGMQVAVI 404 (599)
Q Consensus 359 ~~~DGIlVPGGfG~r--g~eg~i~aik~are~~iP~LGICLGmQll~i 404 (599)
..+|.|+||||.+.. ..+..+..++.+.++++|+.+||-|-.+|+-
T Consensus 73 ~~~D~livpGG~~~~~~~~~~l~~~l~~~~~~gk~iaaiC~G~~~La~ 120 (212)
T 3efe_A 73 ESKDLLILPGGTTWSEEIHQPILERIGQALKIGTIVAAICGATDALAN 120 (212)
T ss_dssp CTTCEEEECCCSCTTSGGGHHHHHHHHHHHHHTCEEEEETHHHHHHHH
T ss_pred cCCCEEEECCCCccccccCHHHHHHHHHHHHCCCEEEEEcHHHHHHHH
Confidence 389999999998754 2355788899998999999999999988853
No 68
>3ot1_A 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis enzyme; csgid, structural genomics; HET: MSE CSX; 1.16A {Vibrio cholerae o1 biovar el tor} SCOP: c.23.16.0
Probab=94.18 E-value=0.047 Score=52.61 Aligned_cols=98 Identities=14% Similarity=0.190 Sum_probs=60.2
Q ss_pred eEEEEEeecCCCcch-HHHHHHHHHHcCCcceeeeEEEEecC-CCCCCc---cccCCchhhhHHHHh--ccCCCEEEeCC
Q 007533 296 VRIAMVGKYTGLSDA-YLSILKALLHASVDLRKKLVIDWIPA-CDLEDA---TEKENPDAYKAAWKL--LKGADGILVPG 368 (599)
Q Consensus 296 v~IaiVGkY~~l~Da-Y~SIi~AL~haG~~~~v~v~i~wi~s-~~le~~---~~~~~p~~y~~a~~~--L~~~DGIlVPG 368 (599)
.||+++ =|..+.+. +....+.|+.+|+++.+ ...+. ..+... ....+. .+ +. ...+|.|+|||
T Consensus 10 ~~v~il-l~~g~~~~e~~~~~~~l~~ag~~v~~----vs~~g~~~v~~~~G~~v~~d~-~l----~~~~~~~~D~livpG 79 (208)
T 3ot1_A 10 KRILVP-VAHGSEEMETVIIVDTLVRAGFQVTM----AAVGDKLQVQGSRGVWLTAEQ-TL----EACSAEAFDALALPG 79 (208)
T ss_dssp CEEEEE-ECTTCCHHHHHHHHHHHHHTTCEEEE----EESSSCSEEECTTSCEEECSE-EG----GGCCGGGCSEEEECC
T ss_pred CeEEEE-ECCCCcHHHHHHHHHHHHHCCCEEEE----EEcCCCcceecCCCcEEeCCC-CH----HHCCCcCCCEEEECC
Confidence 478887 36555433 55788999999876543 11111 011100 000000 01 12 25789999999
Q ss_pred CCCC-C---chhHHHHHHHHHHHcCCCEEEEehhH-HHHH
Q 007533 369 GFGN-R---GVQGKILAAKYAREHRIPYLGICLGM-QVAV 403 (599)
Q Consensus 369 GfG~-r---g~eg~i~aik~are~~iP~LGICLGm-Qll~ 403 (599)
|.+. . ..+..+..++.+.++++|+.+||-|- .+|+
T Consensus 80 G~~~~~~l~~~~~l~~~l~~~~~~gk~i~aiC~G~a~~La 119 (208)
T 3ot1_A 80 GVGGAQAFADSTALLALIDAFSQQGKLVAAICATPALVFA 119 (208)
T ss_dssp CHHHHHHHHTCHHHHHHHHHHHHTTCEEEEETTHHHHTTT
T ss_pred CchHHHHHhhCHHHHHHHHHHHHcCCEEEEEChhHHHHHH
Confidence 9742 2 23557788999999999999999998 7764
No 69
>2xxa_A Signal recognition particle protein; protein transport, RNA/RNA binding protein, hydrolase, gtpas; HET: GCP; 3.94A {Escherichia coli} PDB: 2j28_9
Probab=94.15 E-value=0.48 Score=51.02 Aligned_cols=41 Identities=27% Similarity=0.473 Sum_probs=36.9
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHC-CCeeEEeeeccccc
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKAC-GLRVTCIKIDPYLN 44 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~-g~~v~~~k~dpyln 44 (599)
+.|.++| .+|.||=.+++.|+..|+.+ |.+|..+..|||-+
T Consensus 101 ~vI~ivG--~~GvGKTT~a~~LA~~l~~~~G~kVllvd~D~~r~ 142 (433)
T 2xxa_A 101 AVVLMAG--LQGAGKTTSVGKLGKFLREKHKKKVLVVSADVYRP 142 (433)
T ss_dssp EEEEEEC--STTSSHHHHHHHHHHHHHHTSCCCEEEEECCCSST
T ss_pred eEEEEEC--CCCCCHHHHHHHHHHHHHHhcCCeEEEEecCCCCc
Confidence 5677885 49999999999999999999 99999999999853
No 70
>1u9c_A APC35852; structural genomics, protein structure initiative, MCSG, PAR disease, chaperone, cysteine protease, PSI; 1.35A {Geobacillus stearothermophilus} SCOP: c.23.16.2
Probab=94.08 E-value=0.032 Score=54.01 Aligned_cols=45 Identities=24% Similarity=0.355 Sum_probs=38.1
Q ss_pred cCCCEEEeCCCCCC----CchhHHHHHHHHHHHcCCCEEEEehhHHHHH
Q 007533 359 KGADGILVPGGFGN----RGVQGKILAAKYAREHRIPYLGICLGMQVAV 403 (599)
Q Consensus 359 ~~~DGIlVPGGfG~----rg~eg~i~aik~are~~iP~LGICLGmQll~ 403 (599)
..+|+|+||||.+. +..+.....++.+.++++|+.+||-|-++|+
T Consensus 88 ~~~D~livpGG~~~~~~l~~~~~l~~~l~~~~~~~k~iaaiC~G~~~La 136 (224)
T 1u9c_A 88 HGFDAIFLPGGHGTMFDFPDNETLQYVLQQFAEDGRIIAAVCHGPSGLV 136 (224)
T ss_dssp SSCSEEEECCCTTHHHHSTTCHHHHHHHHHHHHTTCEEEEETTGGGGGT
T ss_pred hhCCEEEECCCcchHHHhhcCHHHHHHHHHHHHCCCEEEEEChHHHHHH
Confidence 57999999999874 2345678889999999999999999999874
No 71
>3fse_A Two-domain protein containing DJ-1/THIJ/PFPI-like ferritin-like domains; structural genomics; HET: MSE CSX; 1.90A {Anabaena variabilis atcc 29413}
Probab=93.99 E-value=0.1 Score=55.33 Aligned_cols=102 Identities=15% Similarity=0.195 Sum_probs=62.0
Q ss_pred ceEEEEEeecCCCcch-HHHHHHHHHHcCCcceeeeEEEEecCCC-CCC-ccc-cCCchhhhHHHHhc--cCCCEEEeCC
Q 007533 295 PVRIAMVGKYTGLSDA-YLSILKALLHASVDLRKKLVIDWIPACD-LED-ATE-KENPDAYKAAWKLL--KGADGILVPG 368 (599)
Q Consensus 295 ~v~IaiVGkY~~l~Da-Y~SIi~AL~haG~~~~v~v~i~wi~s~~-le~-~~~-~~~p~~y~~a~~~L--~~~DGIlVPG 368 (599)
..+|+++ =|..+.+. .....+.|+.+|+++.+ .-.+... +.. ... .-.++. ..+.+ ..+|.|+|||
T Consensus 10 mkkV~IL-l~dgf~~~El~~p~dvL~~Ag~~v~v----vS~~~g~~V~ss~G~~~i~~d~---~l~~v~~~~~DaLiVPG 81 (365)
T 3fse_A 10 KKKVAIL-IEQAVEDTEFIIPCNGLKQAGFEVVV----LGSRMNEKYKGKRGRLSTQADG---TTTEAIASEFDAVVIPG 81 (365)
T ss_dssp -CEEEEE-CCTTBCHHHHHHHHHHHHHTTCEEEE----EESSSSCCEECTTSCCEECCSE---ETTTCCGGGCSEEEECC
T ss_pred ceEEEEE-ECCCCcHHHHHHHHHHHHHCCCEEEE----EECCCCceeecCCCceEEeCCC---CHhhCCCcCCCEEEEEC
Confidence 4578888 36655443 45678999999876543 1111111 100 000 000000 00122 3689999999
Q ss_pred CCCCC---chhHHHHHHHHHHHcCCCEEEEehhHHHHHH
Q 007533 369 GFGNR---GVQGKILAAKYAREHRIPYLGICLGMQVAVI 404 (599)
Q Consensus 369 GfG~r---g~eg~i~aik~are~~iP~LGICLGmQll~i 404 (599)
|.|.. ..+..+..++.+.++++|+.+||-|-.+|+-
T Consensus 82 G~g~~~l~~~~~l~~~Lr~~~~~gk~IaAIC~G~~lLA~ 120 (365)
T 3fse_A 82 GMAPDKMRRNPNTVRFVQEAMEQGKLVAAVCHGPQVLIE 120 (365)
T ss_dssp BTHHHHHTTCHHHHHHHHHHHHTTCEEEEETTTHHHHHH
T ss_pred CcchhhccCCHHHHHHHHHHHHCCCEEEEECHHHHHHHH
Confidence 98642 3356778899999999999999999999853
No 72
>3ttv_A Catalase HPII; heme orientation, oxidoreductase; HET: HEM; 1.45A {Escherichia coli} PDB: 3ttt_A* 1gge_A* 1iph_A* 4ens_A* 3ttu_A* 3p9p_A* 4enq_A* 1p81_A* 3ttx_A* 4enw_A* 3ttw_A* 4ent_A* 1qws_A* 1cf9_A* 1p80_A* 1qf7_A* 4enu_A* 4enp_A* 1gg9_A* 1ggf_A* ...
Probab=93.86 E-value=0.099 Score=59.98 Aligned_cols=101 Identities=15% Similarity=0.081 Sum_probs=62.4
Q ss_pred CceEEEEEeecCCCcc-hHHHHHHHHHHcCCcceeeeEEEEecCCCCCCc---cccCCchhhhHHHHhccCCCEEEeCCC
Q 007533 294 EPVRIAMVGKYTGLSD-AYLSILKALLHASVDLRKKLVIDWIPACDLEDA---TEKENPDAYKAAWKLLKGADGILVPGG 369 (599)
Q Consensus 294 ~~v~IaiVGkY~~l~D-aY~SIi~AL~haG~~~~v~v~i~wi~s~~le~~---~~~~~p~~y~~a~~~L~~~DGIlVPGG 369 (599)
.+.||||+= ...+.+ ...+++++|+.+|+.+.+. -.....+... ....|. .|.. .....+|+|+||||
T Consensus 599 ~grKVaILl-aDGfEe~El~~pvdaLr~AG~~V~vV----S~~~g~V~gs~G~~V~aD~-t~~~--v~s~~fDALVVPGG 670 (753)
T 3ttv_A 599 KGRVVAILL-NDEVRSADLLAILKALKAKGVHAKLL----YSRMGEVTADDGTVLPIAA-TFAG--APSLTVDAVIVPCG 670 (753)
T ss_dssp TTCEEEEEC-CTTCCHHHHHHHHHHHHHHTCEEEEE----ESSSSEEECTTSCEEECCE-ETTT--SCGGGCSEEEECCS
T ss_pred CCCEEEEEe-cCCCCHHHHHHHHHHHHHCCCEEEEE----EcCCCeEEeCCCCEEeccc-chhh--CCCcCCCEEEECCC
Confidence 346888872 333332 3678999999999976441 1111111000 000000 0110 01235899999999
Q ss_pred CCCC---chhHHHHHHHHHHHcCCCEEEEehhHHHHH
Q 007533 370 FGNR---GVQGKILAAKYAREHRIPYLGICLGMQVAV 403 (599)
Q Consensus 370 fG~r---g~eg~i~aik~are~~iP~LGICLGmQll~ 403 (599)
|.. .....+..++.+.++++|+-+||-|-++|+
T Consensus 671 -g~~~Lr~d~~vl~~Vre~~~~gKpIAAIC~Gp~lLa 706 (753)
T 3ttv_A 671 -NIADIADNGDANYYLMEAYKHLKPIALAGDARKFKA 706 (753)
T ss_dssp -CGGGTTTCHHHHHHHHHHHHTTCCEEEEGGGGGGGG
T ss_pred -ChHHhhhCHHHHHHHHHHHhcCCeEEEECchHHHHH
Confidence 643 335678899999999999999999999984
No 73
>3gra_A Transcriptional regulator, ARAC family; transcription regulator, PSI-II, structural genomics structure initiative; 2.30A {Pseudomonas putida}
Probab=93.84 E-value=0.073 Score=51.12 Aligned_cols=47 Identities=19% Similarity=0.071 Sum_probs=39.1
Q ss_pred ccCCCEEEeCCCCCCCch-hHHHHHHHHHHHcCCCEEEEehhHHHHHH
Q 007533 358 LKGADGILVPGGFGNRGV-QGKILAAKYAREHRIPYLGICLGMQVAVI 404 (599)
Q Consensus 358 L~~~DGIlVPGGfG~rg~-eg~i~aik~are~~iP~LGICLGmQll~i 404 (599)
..++|.|+||||.+.... +..+..++.+.++++++.+||-|-.+|+-
T Consensus 69 ~~~~D~livpGG~~~~~~~~~l~~~l~~~~~~g~~iaaIC~G~~~La~ 116 (202)
T 3gra_A 69 LKELDLLVVCGGLRTPLKYPELDRLLNDCAAHGMALGGLWNGAWFLGR 116 (202)
T ss_dssp GTTCSEEEEECCTTCCSCCTTHHHHHHHHHHHTCEEEEETTHHHHHHH
T ss_pred CCCCCEEEEeCCCchhhccHHHHHHHHHHHhhCCEEEEECHHHHHHHH
Confidence 568999999999765321 66788889888999999999999999864
No 74
>3kjh_A CO dehydrogenase/acetyl-COA synthase complex, accessory protein COOC; Zn-bound dimer, nickel binding protein, ATPase; 1.90A {Carboxydothermus hydrogenoformans} PDB: 3kjg_A* 3kje_A 3kji_A*
Probab=93.83 E-value=0.14 Score=48.91 Aligned_cols=39 Identities=26% Similarity=0.370 Sum_probs=35.2
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccc
Q 007533 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPY 42 (599)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~dpy 42 (599)
|| |.|+| -.|.||=.+|+.++..|..+|+||-.+..||-
T Consensus 1 mk-I~vs~--kGGvGKTt~a~~LA~~la~~g~~VlliD~D~~ 39 (254)
T 3kjh_A 1 MK-LAVAG--KGGVGKTTVAAGLIKIMASDYDKIYAVDGDPD 39 (254)
T ss_dssp CE-EEEEC--SSSHHHHHHHHHHHHHHTTTCSCEEEEEECTT
T ss_pred CE-EEEec--CCCCCHHHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 78 45564 89999999999999999999999999999994
No 75
>3ea0_A ATPase, para family; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; HET: ATP; 2.20A {Chlorobium tepidum}
Probab=93.73 E-value=0.11 Score=49.96 Aligned_cols=41 Identities=15% Similarity=0.148 Sum_probs=37.6
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHC-CCeeEEeeeccc
Q 007533 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKAC-GLRVTCIKIDPY 42 (599)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~~s~g~ll~~~-g~~v~~~k~dpy 42 (599)
||.|.|+++ -.|.||=.+|+.++..|..+ |+||-.+.+||.
T Consensus 4 ~~vI~v~s~-kGGvGKTt~a~~LA~~la~~~g~~VlliD~D~~ 45 (245)
T 3ea0_A 4 KRVFGFVSA-KGGDGGSCIAANFAFALSQEPDIHVLAVDISLP 45 (245)
T ss_dssp CEEEEEEES-STTSSHHHHHHHHHHHHTTSTTCCEEEEECCTT
T ss_pred CeEEEEECC-CCCcchHHHHHHHHHHHHhCcCCCEEEEECCCC
Confidence 578888876 58999999999999999999 999999999997
No 76
>3cio_A ETK, tyrosine-protein kinase ETK; WZC, escherichia coli tyrosine kinase domain, signaling protein, transferase, inner membrane, membrane; 2.50A {Escherichia coli}
Probab=93.55 E-value=0.19 Score=51.20 Aligned_cols=153 Identities=18% Similarity=0.259 Sum_probs=90.0
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccc-------ccCCCCCCCccccceEEEccCCccccCCCCc
Q 007533 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPY-------LNTDAGTMSPFEHGEVFVLDDGGEVDLDLGN 73 (599)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~dpy-------ln~d~gtmsp~~hgevfv~~dg~e~dldlg~ 73 (599)
+|-|+|||. -.|.||=.+|+.++..|...|.||-.|..||. +++++ +.| -+|+
T Consensus 104 ~kvI~vts~-kgG~GKTtva~nLA~~lA~~G~rVLLID~D~r~~~l~~~~~~~~------~~g---------l~~~---- 163 (299)
T 3cio_A 104 NNILMITGA-TPDSGKTFVSSTLAAVIAQSDQKVLFIDADLRRGYSHNLFTVSN------EHG---------LSEY---- 163 (299)
T ss_dssp CCEEEEEES-SSSSCHHHHHHHHHHHHHHTTCCEEEEECCTTTCCHHHHTTCCC------SSS---------HHHH----
T ss_pred CeEEEEECC-CCCCChHHHHHHHHHHHHhCCCcEEEEECCCCCccHHHHcCCCC------CCC---------HHHH----
Confidence 367888864 57999999999999999999999999999983 22221 111 0111
Q ss_pred cccccCCCCCCCCcccchHhhHHHHhhhhcCCCCCCeeEEccc-----------chHHHHHHHHHHhcccCCCCCCCCcE
Q 007533 74 YERFMDIKLTRDNNITTGKIYQSVIDKERKGDYLGKTVQVVPH-----------ITDEIQDWIERVAMIPVDGKEGPVDV 142 (599)
Q Consensus 74 yerfl~~~l~~~~n~ttgkiy~~vi~ker~g~ylg~tvqviph-----------it~~i~~~i~~~~~~p~d~~~~~~dv 142 (599)
|. .. .-..++|.+-.. ..+.|+|- -.+.+++.|+.+. ..+|+
T Consensus 164 ----L~----~~------~~l~~~i~~~~~-----~~l~vl~~g~~~~~~~ell~~~~l~~ll~~l~--------~~yD~ 216 (299)
T 3cio_A 164 ----LA----GK------DELNKVIQHFGK-----GGFDVITRGQVPPNPSELLMRDRMRQLLEWAN--------DHYDL 216 (299)
T ss_dssp ----HT----TS------SCHHHHCEEETT-----TTEEEECCCSCCSCHHHHHTSHHHHHHHHHHH--------HHCSE
T ss_pred ----Cc----CC------CCHHHhhhccCC-----CCEEEEECCCCCCCHHHHhCHHHHHHHHHHHH--------hCCCE
Confidence 00 00 012233332110 22445542 1245666676664 36899
Q ss_pred EEEeeCccccccccchHHHHHHHhhhHcCCCCEEEEeeeeeeeecCCCccccCCchhhhhhhhcCCCcccEEEEe
Q 007533 143 CVIELGGTIGDIESMPFIEALGQFSYRVGPGNFCLIHVSLVPVLNVVGEQKTKPTQHSVRGLRGQGLTPNILACR 217 (599)
Q Consensus 143 ~i~e~ggtvgdies~pf~ea~rq~~~~~g~~n~~~ihv~~vp~~~~~~e~ktkptq~sv~~Lrs~Gi~pd~iv~R 217 (599)
|||+..+..+-- +|. .+.... + ..+++.- .+....+-++.+++.|+..|+..-++|+-
T Consensus 217 VIIDtpp~~~~~------d~~-~l~~~a---d-----~vilV~~--~~~~~~~~~~~~~~~l~~~~~~~~GvVlN 274 (299)
T 3cio_A 217 VIVDTPPMLAVS------DAA-VVGRSV---G-----TSLLVAR--FGLNTAKEVSLSMQRLEQAGVNIKGAILN 274 (299)
T ss_dssp EEEECCCTTTCT------HHH-HHGGGC---S-----EEEEEEE--TTTSCTTHHHHHHHHHHHTTCCCCCEEEE
T ss_pred EEEcCCCCchhH------HHH-HHHHHC---C-----EEEEEEc--CCCChHHHHHHHHHHHHhCCCCeEEEEEe
Confidence 999999876521 111 111111 1 2223322 35555567888999999999887766664
No 77
>3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus}
Probab=93.31 E-value=0.83 Score=49.52 Aligned_cols=40 Identities=23% Similarity=0.377 Sum_probs=36.2
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccc
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYL 43 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~dpyl 43 (599)
+.|+++|- +|.||=.+++.|+..|+.+|++|..+..|||-
T Consensus 101 ~vIlivG~--~G~GKTTt~~kLA~~l~~~G~kVllv~~D~~R 140 (443)
T 3dm5_A 101 TILLMVGI--QGSGKTTTVAKLARYFQKRGYKVGVVCSDTWR 140 (443)
T ss_dssp EEEEEECC--TTSSHHHHHHHHHHHHHTTTCCEEEEECCCSS
T ss_pred eEEEEECc--CCCCHHHHHHHHHHHHHHCCCeEEEEeCCCcc
Confidence 46777775 99999999999999999999999999999973
No 78
>1rw7_A YDR533CP; alpha-beta sandwich, DJ-1/THIJ/PFPI superfamily, unknown function; 1.80A {Saccharomyces cerevisiae} SCOP: c.23.16.2 PDB: 1qvv_A* 1qvz_A 1qvw_A
Probab=92.84 E-value=0.034 Score=54.95 Aligned_cols=45 Identities=11% Similarity=0.056 Sum_probs=37.5
Q ss_pred cCCCEEEeCCCCCC----CchhHHHHHHHHHHHcCCCEEEEehhHHHHH
Q 007533 359 KGADGILVPGGFGN----RGVQGKILAAKYAREHRIPYLGICLGMQVAV 403 (599)
Q Consensus 359 ~~~DGIlVPGGfG~----rg~eg~i~aik~are~~iP~LGICLGmQll~ 403 (599)
.++|+|+||||.|. +..+.....++.+.++++|+.+||-|-.+|+
T Consensus 97 ~~~D~livpGG~~~~~~l~~~~~l~~~l~~~~~~gk~vaaIC~G~~~La 145 (243)
T 1rw7_A 97 DDYQIFFASAGHGTLFDYPKAKDLQDIASEIYANGGVVAAVCHGPAIFD 145 (243)
T ss_dssp GGEEEEEECCSTTHHHHGGGCHHHHHHHHHHHHTTCEEEEETTGGGGGT
T ss_pred hhCcEEEECCCCCchhhcccCHHHHHHHHHHHHcCCEEEEECCCHHHHH
Confidence 46899999999874 2335678899999999999999999998764
No 79
>2g0t_A Conserved hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.67A {Thermotoga maritima} SCOP: c.37.1.10
Probab=92.78 E-value=0.15 Score=53.71 Aligned_cols=41 Identities=22% Similarity=0.144 Sum_probs=35.9
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccc
Q 007533 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPY 42 (599)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~dpy 42 (599)
+|-|||||==. ++||+.++..+-+.|+.+|++|..++.-.+
T Consensus 169 ~~ri~v~GTDt-~vGKt~t~~~L~~~l~~~G~~v~~v~tgqt 209 (350)
T 2g0t_A 169 IKVVGVFGTDC-VVGKRTTAVQLWERALEKGIKAGFLATGQT 209 (350)
T ss_dssp SEEEEEEESSS-SSSHHHHHHHHHHHHHHTTCCEEEEECSHH
T ss_pred ceEEEEecCCC-CccCccHHHHHHHHHHhcCCeEEEEccCce
Confidence 36789998666 599999999999999999999999887665
No 80
>3noq_A THIJ/PFPI family protein; DJ-1 superfamily, isocyanide hydratase, isonitrIle hydratase; HET: NHE; 1.00A {Pseudomonas fluorescens} PDB: 3noo_A 3non_A 3nor_A* 3nov_A
Probab=92.76 E-value=0.094 Score=51.60 Aligned_cols=102 Identities=13% Similarity=0.119 Sum_probs=60.3
Q ss_pred ceEEEEEeecCCCcch-HHHHHHHHHH-cCCcceeeeEEEEecCCCCCCc-cccCCchhhhHHHHhccCCCEEEeCCCCC
Q 007533 295 PVRIAMVGKYTGLSDA-YLSILKALLH-ASVDLRKKLVIDWIPACDLEDA-TEKENPDAYKAAWKLLKGADGILVPGGFG 371 (599)
Q Consensus 295 ~v~IaiVGkY~~l~Da-Y~SIi~AL~h-aG~~~~v~v~i~wi~s~~le~~-~~~~~p~~y~~a~~~L~~~DGIlVPGGfG 371 (599)
..+|+++ =|..+.+. .....+.|.. .++++ .+.+.+...+... ...-.++ ...+.+.++|.|+||||+|
T Consensus 5 ~~~V~il-l~~gf~~~e~~~p~evl~~~~~~~v----~~vs~~~~~V~~~~G~~v~~d---~~l~~~~~~D~livpGG~g 76 (231)
T 3noq_A 5 AVQIGFL-LFPEVQQLDLTGPHDVLASLPDVQV----HLIWKEPGPVVASSGLVLQAT---TSFADCPPLDVICIPGGTG 76 (231)
T ss_dssp CEEEEEE-CCTTCCHHHHHHHHHHHTTSTTEEE----EEEESSSEEEECTTSCEEEEC---EETTTCCCCSEEEECCSTT
T ss_pred cEEEEEE-EeCCCcHHHHHHHHHHHHcCCCCEE----EEEECCCCcEEcCCCCEEecc---cChhHCCcCCEEEECCCCC
Confidence 3678888 46655433 4456777776 44433 2333221111100 0000000 0012345799999999987
Q ss_pred CC---chhHHHHHHHHHHHcCCCEEEEehhHHHHHH
Q 007533 372 NR---GVQGKILAAKYAREHRIPYLGICLGMQVAVI 404 (599)
Q Consensus 372 ~r---g~eg~i~aik~are~~iP~LGICLGmQll~i 404 (599)
.. ..+..+..++.+.++++++.+||-|-.+|+-
T Consensus 77 ~~~~~~~~~l~~~lr~~~~~g~~v~aiC~G~~~La~ 112 (231)
T 3noq_A 77 VGALMEDPQALAFIRQQAARARYVTSVSTGSLVLGA 112 (231)
T ss_dssp HHHHTTCHHHHHHHHHHHTTCSEEEEETTHHHHHHH
T ss_pred hhhhccCHHHHHHHHHHHhcCCEEEEECHHHHHHHH
Confidence 53 2356778888888899999999999988853
No 81
>3n7t_A Macrophage binding protein; seattle structural genomics center for infectious disease, S macrophage, pathogenic fungus, coccidioidomycosis; 2.10A {Coccidioides immitis} SCOP: c.23.16.0
Probab=92.76 E-value=0.044 Score=54.83 Aligned_cols=45 Identities=16% Similarity=0.093 Sum_probs=38.1
Q ss_pred cCCCEEEeCCCCCC----CchhHHHHHHHHHHHcCCCEEEEehhHHHHH
Q 007533 359 KGADGILVPGGFGN----RGVQGKILAAKYAREHRIPYLGICLGMQVAV 403 (599)
Q Consensus 359 ~~~DGIlVPGGfG~----rg~eg~i~aik~are~~iP~LGICLGmQll~ 403 (599)
.++|+|+||||+|. +..+.....++.+.++++|+.+||-|-.+|+
T Consensus 104 ~~yD~l~ipGG~g~~~~l~~~~~l~~~l~~~~~~gk~iaaIC~Gp~~La 152 (247)
T 3n7t_A 104 HDYGLMFVCGGHGALYDFPHAKHLQNIAQDIYKRGGVIGAVCHGPAMLP 152 (247)
T ss_dssp GGCSEEEECCSTTHHHHGGGCHHHHHHHHHHHHTTCEEEEETTGGGGGG
T ss_pred hhCCEEEEeCCCchhhhcccCHHHHHHHHHHHHcCCEEEEEChHHHHHH
Confidence 57899999999875 2335678889999999999999999998874
No 82
>3kl4_A SRP54, signal recognition 54 kDa protein; signal recognition particle, SRP, SRP54, FFH, signal sequenc peptide; 3.50A {Sulfolobus solfataricus} PDB: 1qzx_A 1qzw_A
Probab=92.68 E-value=1.1 Score=48.35 Aligned_cols=39 Identities=28% Similarity=0.456 Sum_probs=35.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccc
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPY 42 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~dpy 42 (599)
+.|+++|. +|.||=.+++.|+.+|+.+|.+|..+-.|+|
T Consensus 98 ~vI~lvG~--~GsGKTTt~~kLA~~l~~~G~kVllv~~D~~ 136 (433)
T 3kl4_A 98 FIIMLVGV--QGSGKTTTAGKLAYFYKKRGYKVGLVAADVY 136 (433)
T ss_dssp EEEEECCC--TTSCHHHHHHHHHHHHHHTTCCEEEEEECCS
T ss_pred eEEEEECC--CCCCHHHHHHHHHHHHHHcCCeEEEEecCcc
Confidence 46788875 8999999999999999999999999999976
No 83
>3kkl_A Probable chaperone protein HSP33; peptidase, heat shock protein, hydrolase, protease, stress response; 2.03A {Saccharomyces cerevisiae} PDB: 3mii_A*
Probab=92.48 E-value=0.049 Score=54.31 Aligned_cols=45 Identities=13% Similarity=0.049 Sum_probs=38.1
Q ss_pred cCCCEEEeCCCCCC----CchhHHHHHHHHHHHcCCCEEEEehhHHHHH
Q 007533 359 KGADGILVPGGFGN----RGVQGKILAAKYAREHRIPYLGICLGMQVAV 403 (599)
Q Consensus 359 ~~~DGIlVPGGfG~----rg~eg~i~aik~are~~iP~LGICLGmQll~ 403 (599)
.++|+|+||||.|. +..+.....++.+.++++|+.+||-|-.+|+
T Consensus 97 ~~yD~l~vpGG~~~~~~l~~~~~l~~~l~~~~~~gk~iaaIC~G~~~La 145 (244)
T 3kkl_A 97 SDYKVFFASAGHGALFDYPKAKNLQDIASKIYANGGVIAAICHGPLLFD 145 (244)
T ss_dssp GGCSEEEECCSTTHHHHGGGCHHHHHHHHHHHHTTCEEEEETTGGGGGT
T ss_pred hhCCEEEEcCCCchhhhcccCHHHHHHHHHHHHcCCEEEEECHHHHHHH
Confidence 56899999999874 2345678889999999999999999998874
No 84
>2iuf_A Catalase; oxidoreductase; HET: HDD NAG; 1.71A {Penicillium janthinellum} PDB: 2xf2_A*
Probab=92.00 E-value=0.24 Score=56.37 Aligned_cols=96 Identities=14% Similarity=0.086 Sum_probs=61.8
Q ss_pred ceEEEEEeec-CCCc-chHHHHHHHHHHcCCcceeeeEEEEecCCCCCCccccCCchhhhHHHHhccCCCEEEeCCCC-C
Q 007533 295 PVRIAMVGKY-TGLS-DAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGF-G 371 (599)
Q Consensus 295 ~v~IaiVGkY-~~l~-DaY~SIi~AL~haG~~~~v~v~i~wi~s~~le~~~~~~~p~~y~~a~~~L~~~DGIlVPGGf-G 371 (599)
..||||+-.- .... .....+..+|+.+|+.+.+. .. ...+ .. | ..|.+ .....+|+|+||||. |
T Consensus 529 g~kVaIL~a~~dGfe~~E~~~~~~~L~~aG~~V~vV------s~-~~g~-~v--D-~t~~~--~~s~~fDAVvlPGG~~g 595 (688)
T 2iuf_A 529 GLKVGLLASVNKPASIAQGAKLQVALSSVGVDVVVV------AE-RXAN-NV--D-ETYSA--SDAVQFDAVVVADGAEG 595 (688)
T ss_dssp TCEEEEECCTTCHHHHHHHHHHHHHHGGGTCEEEEE------ES-SCCT-TC--C-EESTT--CCGGGCSEEEECTTCGG
T ss_pred CCEEEEEecCCCCCcHHHHHHHHHHHHHCCCEEEEE------ec-cCCc-cc--c-cchhc--CCccccCeEEecCCCcc
Confidence 4689988320 1111 24678999999999988652 11 1110 00 0 01111 123578999999994 4
Q ss_pred ----------------C---CchhHHHHHHHHHHHcCCCEEEEehhHHHHH
Q 007533 372 ----------------N---RGVQGKILAAKYAREHRIPYLGICLGMQVAV 403 (599)
Q Consensus 372 ----------------~---rg~eg~i~aik~are~~iP~LGICLGmQll~ 403 (599)
. +.....+..++.+.++++|+-.||-|-++|.
T Consensus 596 ~~~~~~~~~~~~~~~~~~~L~~~~~~~~~v~~~~~~gKpIaAIc~ap~vL~ 646 (688)
T 2iuf_A 596 LFGADSFTVEPSAGSGASTLYPAGRPLNILLDAFRFGKTVGALGSGSDALE 646 (688)
T ss_dssp GCCTTTTTCCCCTTSCCCSSSCTTHHHHHHHHHHHHTCEEEEEGGGHHHHH
T ss_pred cccccccccccccccchhhcccChHHHHHHHHHHHcCCEEEEECchHHHHH
Confidence 2 1235578899999999999999999999874
No 85
>3end_A Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2} PDB: 3fwy_A*
Probab=91.52 E-value=0.25 Score=49.61 Aligned_cols=43 Identities=33% Similarity=0.451 Sum_probs=39.3
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccccC
Q 007533 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNT 45 (599)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~dpyln~ 45 (599)
||.|.|+ | -.|.||=.+|+.++..|..+|+||-.+..||..|.
T Consensus 41 ~~vI~v~-~-KGGvGKTT~a~nLA~~La~~G~~VlliD~D~~~~~ 83 (307)
T 3end_A 41 AKVFAVY-G-KGGIGKSTTSSNLSAAFSILGKRVLQIGCDPKHDS 83 (307)
T ss_dssp CEEEEEE-C-STTSSHHHHHHHHHHHHHHTTCCEEEEEESSSCCT
T ss_pred ceEEEEE-C-CCCccHHHHHHHHHHHHHHCCCeEEEEeCCCCCCH
Confidence 5789999 7 99999999999999999999999999999996443
No 86
>3mgk_A Intracellular protease/amidase related enzyme (THIJ family); amidotranferase-like, structural genomics, PSI; 2.00A {Clostridium acetobutylicum}
Probab=91.16 E-value=0.1 Score=50.44 Aligned_cols=46 Identities=20% Similarity=0.236 Sum_probs=37.4
Q ss_pred ccCCCEEEeCCCCCCC---chhHHHHHHHHHHHcCCCEEEEehhHHHHH
Q 007533 358 LKGADGILVPGGFGNR---GVQGKILAAKYAREHRIPYLGICLGMQVAV 403 (599)
Q Consensus 358 L~~~DGIlVPGGfG~r---g~eg~i~aik~are~~iP~LGICLGmQll~ 403 (599)
...+|.|+||||.|.. ..+..+..++.+.++++++.+||-|-.+|+
T Consensus 63 ~~~~D~livpGG~~~~~~~~~~~~~~~l~~~~~~~k~iaaiC~G~~~La 111 (211)
T 3mgk_A 63 ENIEKILFVPGGSGTREKVNDDNFINFIGNMVKESKYIISVCTGSALLS 111 (211)
T ss_dssp SSSEEEEEECCSTHHHHHTTCHHHHHHHHHHHHHCSEEEECTTHHHHHH
T ss_pred CCCCCEEEECCCcchhhhcCCHHHHHHHHHHHHcCCEEEEEchHHHHHH
Confidence 3457999999997653 234577888888889999999999999885
No 87
>1n57_A Chaperone HSP31, protein YEDU; alpha-beta sandwich; 1.60A {Escherichia coli} SCOP: c.23.16.2 PDB: 1pv2_A 1izy_A 1ons_A 1izz_A
Probab=90.96 E-value=0.076 Score=54.22 Aligned_cols=46 Identities=26% Similarity=0.385 Sum_probs=38.4
Q ss_pred ccCCCEEEeCCCCCCC-c---hhHHHHHHHHHHHcCCCEEEEehhHHHHH
Q 007533 358 LKGADGILVPGGFGNR-G---VQGKILAAKYAREHRIPYLGICLGMQVAV 403 (599)
Q Consensus 358 L~~~DGIlVPGGfG~r-g---~eg~i~aik~are~~iP~LGICLGmQll~ 403 (599)
..++|+|+||||.|.. . .+.....++++.++++|+.+||-|-.+|+
T Consensus 143 ~~~yD~livPGG~g~~~~l~~~~~l~~~l~~~~~~gk~VaaIC~Gp~~La 192 (291)
T 1n57_A 143 DSEYAAIFVPGGHGALIGLPESQDVAAALQWAIKNDRFVISLCHGPAAFL 192 (291)
T ss_dssp TCSEEEEEECCSGGGGSSGGGCHHHHHHHHHHHHTTCEEEEETTGGGGGG
T ss_pred cccCCEEEecCCcchhhhhhhCHHHHHHHHHHHHcCCEEEEECccHHHHH
Confidence 4688999999998764 2 35678899999999999999999998763
No 88
>1sy7_A Catalase 1; heme oxidation, singlet oxygen, oxidoreductase; HET: HDD HEM; 1.75A {Neurospora crassa} SCOP: c.23.16.3
Probab=90.58 E-value=0.45 Score=54.54 Aligned_cols=103 Identities=14% Similarity=0.052 Sum_probs=61.9
Q ss_pred ceEEEEEeecCCCcch-HHHHHHHHHHcCCcceeeeEEEEecCCCCCCc---cccCCchhhhHHHHhccCCCEEEeCCCC
Q 007533 295 PVRIAMVGKYTGLSDA-YLSILKALLHASVDLRKKLVIDWIPACDLEDA---TEKENPDAYKAAWKLLKGADGILVPGGF 370 (599)
Q Consensus 295 ~v~IaiVGkY~~l~Da-Y~SIi~AL~haG~~~~v~v~i~wi~s~~le~~---~~~~~p~~y~~a~~~L~~~DGIlVPGGf 370 (599)
..+|+|+ =+....+. .....++|+.+|+++.+ .......+... ....+. .+.. -....+|+|+||||.
T Consensus 534 ~rkVaIL-l~dGfe~~El~~p~dvL~~AG~~V~i----vS~~gg~V~ss~G~~v~~d~-~l~~--v~~~~yDaViVPGG~ 605 (715)
T 1sy7_A 534 SRRVAII-IADGYDNVAYDAAYAAISANQAIPLV----IGPRRSKVTAANGSTVQPHH-HLEG--FRSTMVDAIFIPGGA 605 (715)
T ss_dssp TCEEEEE-CCTTBCHHHHHHHHHHHHHTTCEEEE----EESCSSCEEBTTSCEECCSE-ETTT--CCGGGSSEEEECCCH
T ss_pred CCEEEEE-EcCCCCHHHHHHHHHHHHhcCCEEEE----EECCCCceecCCCceEeccc-cccc--CCcccCCEEEEcCCc
Confidence 4689988 35444322 45788999999876543 22211111000 000000 0100 012468999999985
Q ss_pred C-CC---chhHHHHHHHHHHHcCCCEEEEehhHHHHHHH
Q 007533 371 G-NR---GVQGKILAAKYAREHRIPYLGICLGMQVAVIE 405 (599)
Q Consensus 371 G-~r---g~eg~i~aik~are~~iP~LGICLGmQll~ie 405 (599)
+ .. .....+..++.+.++++|+.+||-|-.+|+-+
T Consensus 606 ~~~~~l~~~~~l~~~Lr~~~~~gK~IaAIC~G~~lLA~A 644 (715)
T 1sy7_A 606 KAAETLSKNGRALHWIREAFGHLKAIGATGEAVDLVAKA 644 (715)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHTTCEEEEETTHHHHHHHH
T ss_pred ccHhhhccCHHHHHHHHHHHhCCCEEEEECHHHHHHHHc
Confidence 3 21 22457788899999999999999999998754
No 89
>3fkq_A NTRC-like two-domain protein; RER070207001320, structural GE joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: ATP 2PE; 2.10A {Eubacterium rectale}
Probab=90.03 E-value=2 Score=44.75 Aligned_cols=44 Identities=20% Similarity=0.302 Sum_probs=39.2
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccccC
Q 007533 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNT 45 (599)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~dpyln~ 45 (599)
||.|.|++| -.|.||=.+|+.++..|..+|.||-.+-+||+-|+
T Consensus 143 ~kvIav~s~-KGGvGKTT~a~nLA~~La~~g~rVlliD~D~~~~l 186 (373)
T 3fkq_A 143 SSVVIFTSP-CGGVGTSTVAAACAIAHANMGKKVFYLNIEQCGTT 186 (373)
T ss_dssp CEEEEEECS-STTSSHHHHHHHHHHHHHHHTCCEEEEECCTTCCH
T ss_pred ceEEEEECC-CCCChHHHHHHHHHHHHHhCCCCEEEEECCCCCCH
Confidence 578888887 68999999999999999999999999999976554
No 90
>3ewn_A THIJ/PFPI family protein; monomer, PSI nysgrc, structural genomics, protein structure initiative; 1.65A {Pseudomonas syringae PV}
Probab=89.94 E-value=0.19 Score=50.29 Aligned_cols=102 Identities=13% Similarity=0.117 Sum_probs=59.1
Q ss_pred ceEEEEEeecCCCcch-HHHHHHHH-HHcCCcceeeeEEEEecCCCCCCc-cccCCch-hhhHHHHhccCCCEEEeCCCC
Q 007533 295 PVRIAMVGKYTGLSDA-YLSILKAL-LHASVDLRKKLVIDWIPACDLEDA-TEKENPD-AYKAAWKLLKGADGILVPGGF 370 (599)
Q Consensus 295 ~v~IaiVGkY~~l~Da-Y~SIi~AL-~haG~~~~v~v~i~wi~s~~le~~-~~~~~p~-~y~~a~~~L~~~DGIlVPGGf 370 (599)
+.+|+++ =|..+.+. .....+.| ...++++ .+.+.+...+... ...-.++ .+. +.-..+|.|+||||.
T Consensus 23 ~~~I~il-l~~gf~~~e~~~p~dvl~~~~~~~v----~~vs~~~~~V~~~~G~~i~~d~~l~---~~~~~yD~liVPGG~ 94 (253)
T 3ewn_A 23 DEQIAML-VYPGMTVMDLVGPHCMFGSLMGAKI----YIVAKSLDPVTSDAGLAIVPTATFG---TCPRDLTVLFAPGGT 94 (253)
T ss_dssp CCEEEEE-CCTTBCHHHHHHHHHHHTTSTTCEE----EEEESSSSCEECTTSCEECCSEETT---TSCSSCSEEEECCBS
T ss_pred CeEEEEE-eCCCCcHHHHHHHHHHHHhCCCCEE----EEEeCCCCeEEcCCCCEEeCCcCHH---HcCCCCCEEEECCCc
Confidence 3688888 46655433 34566777 3445433 3333322211110 0000000 011 111346999999998
Q ss_pred -CCC---chhHHHHHHHHHHHcCCCEEEEehhHHHHHH
Q 007533 371 -GNR---GVQGKILAAKYAREHRIPYLGICLGMQVAVI 404 (599)
Q Consensus 371 -G~r---g~eg~i~aik~are~~iP~LGICLGmQll~i 404 (599)
|.. ..+..+..++.+.++++++.+||-|-.+|+-
T Consensus 95 ~g~~~l~~~~~l~~~Lr~~~~~gk~IaaICtG~~lLa~ 132 (253)
T 3ewn_A 95 DGTLAAASDAETLAFMADRGARAKYITSVCSGSLILGA 132 (253)
T ss_dssp HHHHHHTTCHHHHHHHHHHHTTCSEEEEETTHHHHHHH
T ss_pred cchhhhccCHHHHHHHHHHHHcCCEEEEEChHHHHHHH
Confidence 642 3356788888888899999999999988853
No 91
>2ffh_A Protein (FFH); SRP54, signal recognition particle, GTPase, M domain, RNA-binding, signal sequence-binding, helix-turn-helix, protein targeting; 3.20A {Thermus aquaticus} SCOP: a.24.13.1 a.36.1.1 c.37.1.10 PDB: 2iy3_A
Probab=89.44 E-value=3 Score=44.84 Aligned_cols=40 Identities=25% Similarity=0.361 Sum_probs=35.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccc
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYL 43 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~dpyl 43 (599)
+.|.++| . +|-||=.+++.++.+|+..|.+|..+..|+|-
T Consensus 99 ~vi~i~G-~-~GsGKTT~~~~LA~~l~~~g~~Vllvd~D~~r 138 (425)
T 2ffh_A 99 NLWFLVG-L-QGSGKTTTAAKLALYYKGKGRRPLLVAADTQR 138 (425)
T ss_dssp EEEEEEC-C-TTSSHHHHHHHHHHHHHTTTCCEEEEECCSSC
T ss_pred eEEEEEC-C-CCCCHHHHHHHHHHHHHHcCCeEEEeeccccC
Confidence 4677775 3 99999999999999999999999999999874
No 92
>4gdh_A DJ-1, uncharacterized protein C22E12.03C; unknown function, cysteine oxidation; 1.05A {Schizosaccharomyces pombe} PDB: 4ge3_A 4ge0_A
Probab=89.17 E-value=0.36 Score=45.98 Aligned_cols=101 Identities=17% Similarity=0.133 Sum_probs=54.0
Q ss_pred eEEEEEeecCCCcch-HHHHHHHHHHcCCcceeeeEEEEecCCCC---CC-c--cccCCchhhh---HHHHhccCCCEEE
Q 007533 296 VRIAMVGKYTGLSDA-YLSILKALLHASVDLRKKLVIDWIPACDL---ED-A--TEKENPDAYK---AAWKLLKGADGIL 365 (599)
Q Consensus 296 v~IaiVGkY~~l~Da-Y~SIi~AL~haG~~~~v~v~i~wi~s~~l---e~-~--~~~~~p~~y~---~a~~~L~~~DGIl 365 (599)
+||+++ =+..+.+. .....+.|+.+|+.+.+. .+....- .. . ....+. .+. .+.....++|+|+
T Consensus 5 ~kV~il-l~dGfe~~E~~~p~~vl~~ag~~v~~~----s~~~~~~~~v~~~~g~~v~~d~-~~~~~~~~d~~~~~yD~lv 78 (194)
T 4gdh_A 5 VKVCLF-VADGTDEIEFSAPWGIFKRAEIPIDSV----YVGENKDRLVKMSRDVEMYANR-SYKEIPSADDFAKQYDIAI 78 (194)
T ss_dssp CCEEEE-EETTCCHHHHHHHHHHHHHTTCCEEEE----EESSCTTCEEECTTSCEEECSE-EGGGSCCHHHHHHHCSEEE
T ss_pred CEEEEE-ECCCcCHHHHHHHHHHHHHCCCeEEEE----EEcCCCCceEecCCCceeeccc-cHhhCCccccccccCCEEE
Confidence 467776 35555433 446678899999876432 2211110 00 0 000000 000 0112245689999
Q ss_pred eCCCCC-CC---chhHHHHHHHHHHH-cCCCEEEEehhHHHH
Q 007533 366 VPGGFG-NR---GVQGKILAAKYARE-HRIPYLGICLGMQVA 402 (599)
Q Consensus 366 VPGGfG-~r---g~eg~i~aik~are-~~iP~LGICLGmQll 402 (599)
||||.+ .. ..+..+..++.+.+ .++|+-.||-|..++
T Consensus 79 vPGG~~~~~~l~~~~~l~~~l~~~~~~~~k~iaaiC~g~~l~ 120 (194)
T 4gdh_A 79 IPGGGLGAKTLSTTPFVQQVVKEFYKKPNKWIGMICAGTLTA 120 (194)
T ss_dssp ECCCHHHHHHHHTCHHHHHHHHHHTTCTTCEEEEEGGGGHHH
T ss_pred ECCCchhHhHhhhCHHHHHHHHHhhhcCCceEEeecccccch
Confidence 999954 22 22445666766543 478999999997443
No 93
>1ihu_A Arsenical pump-driving ATPase; aluminum fluoride, ADP, ARSA ATPase, ATP binding site, hydro; HET: ADP; 2.15A {Escherichia coli} SCOP: c.37.1.10 c.37.1.10 PDB: 1f48_A* 1ii0_A* 1ii9_A*
Probab=89.08 E-value=0.53 Score=52.12 Aligned_cols=41 Identities=29% Similarity=0.426 Sum_probs=33.5
Q ss_pred EEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccccC
Q 007533 4 VLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNT 45 (599)
Q Consensus 4 i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~dpyln~ 45 (599)
|+|++| -.|.||-.+|++++..|..+|.+|-.+-.||.-|.
T Consensus 329 ~~~~~~-~~g~Gktt~a~~lA~~l~~~g~~vllvD~Dp~~~l 369 (589)
T 1ihu_A 329 LIMLMG-KGGVGKTTMAAAIAVRLADMGFDVHLTTSDPAAHL 369 (589)
T ss_dssp EEEEEC-STTSSHHHHHHHHHHHHHHTTCCEEEEESCCC---
T ss_pred EEEEec-CCCCChhhHHHHHHHHHHHCCCcEEEEeCCCcccH
Confidence 444444 57999999999999999999999999999997554
No 94
>3q9l_A Septum site-determining protein MIND; ATPase, bacterial cell division inhibitor, MINC, MINE, cell hydrolase; HET: ATP; 2.34A {Escherichia coli} PDB: 3r9i_A* 3r9j_A*
Probab=88.98 E-value=0.53 Score=45.45 Aligned_cols=40 Identities=25% Similarity=0.420 Sum_probs=36.9
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 007533 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (599)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~dp 41 (599)
+|.|.|+++ -.|.||=.+|+.++..|..+|+||-.+..||
T Consensus 2 ~~vi~v~s~-kgGvGKTt~a~~LA~~la~~g~~VlliD~D~ 41 (260)
T 3q9l_A 2 ARIIVVTSG-KGGVGKTTSSAAIATGLAQKGKKTVVIDFAI 41 (260)
T ss_dssp CEEEEEECS-STTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CeEEEEECC-CCCCcHHHHHHHHHHHHHhCCCcEEEEECCC
Confidence 478888875 5899999999999999999999999999999
No 95
>1np6_A Molybdopterin-guanine dinucleotide biosynthesis protein B; mixed alpha-beta fold, elongated beta-sheet, walker A motif, P-loop structural motif; 1.90A {Escherichia coli} SCOP: c.37.1.10 PDB: 1p9n_A
Probab=88.90 E-value=0.51 Score=44.43 Aligned_cols=44 Identities=25% Similarity=0.250 Sum_probs=36.1
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccc-ccCC
Q 007533 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPY-LNTD 46 (599)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~dpy-ln~d 46 (599)
|+.|.++| -||-||-.+...+-..|+.+|++|..+|.||- .++|
T Consensus 6 ~~~i~i~G--~sGsGKTTl~~~l~~~l~~~g~~v~~i~~~~~~~~id 50 (174)
T 1np6_A 6 IPLLAFAA--WSGTGKTTLLKKLIPALCARGIRPGLIKHTHHDMDVD 50 (174)
T ss_dssp CCEEEEEC--CTTSCHHHHHHHHHHHHHHTTCCEEEEEECCC-----
T ss_pred ceEEEEEe--CCCCCHHHHHHHHHHhccccCCceeEEeeCCCccccC
Confidence 46788888 79999999999999999999999999999983 3555
No 96
>1g3q_A MIND ATPase, cell division inhibitor; alpha-beta-alpha layered, protein-ADP complex, cell cycle, hydrolase; HET: ADP; 2.00A {Pyrococcus furiosus} SCOP: c.37.1.10 PDB: 1g3r_A* 1ion_A*
Probab=88.82 E-value=0.56 Score=44.69 Aligned_cols=41 Identities=22% Similarity=0.327 Sum_probs=37.2
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccc
Q 007533 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPY 42 (599)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~dpy 42 (599)
+|.|.|+++ -.|.||=.+|+.++..|..+|+||-.+..||.
T Consensus 2 ~~~i~v~s~-kgGvGKTt~a~~LA~~la~~g~~VlliD~D~~ 42 (237)
T 1g3q_A 2 GRIISIVSG-KGGTGKTTVTANLSVALGDRGRKVLAVDGDLT 42 (237)
T ss_dssp CEEEEEECS-STTSSHHHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred ceEEEEecC-CCCCCHHHHHHHHHHHHHhcCCeEEEEeCCCC
Confidence 388888875 57999999999999999999999999999994
No 97
>2afh_E Nitrogenase iron protein 1; nitrogen fixation, iron-sulfur, metal-binding, molybdenum, oxidoreductase; HET: HCA CFN CLF PGE PG4 P6G 1PE; 2.10A {Azotobacter vinelandii} SCOP: c.37.1.10 PDB: 1g1m_A 1g5p_A 1m1y_E* 1m34_E* 1n2c_E* 1nip_A* 1fp6_A* 2afi_E* 2afk_E* 2nip_A 1de0_A 1xcp_A* 1xdb_A 1xd8_A 1xd9_A* 1g20_E* 1g21_E* 2c8v_A* 1rw4_A
Probab=86.44 E-value=0.89 Score=45.15 Aligned_cols=42 Identities=26% Similarity=0.449 Sum_probs=38.7
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccccc
Q 007533 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLN 44 (599)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~dpyln 44 (599)
||-|.|+ | =-|.||=.+|+.++..|..+|+||-.|-.||.-|
T Consensus 2 MkvIavs-~-KGGvGKTT~a~nLA~~La~~G~rVlliD~D~q~~ 43 (289)
T 2afh_E 2 MRQCAIY-G-KGGIGKSTTTQNLVAALAEMGKKVMIVGCDPKAD 43 (289)
T ss_dssp CEEEEEE-E-CTTSSHHHHHHHHHHHHHHTTCCEEEEEECSSSC
T ss_pred ceEEEEe-C-CCcCcHHHHHHHHHHHHHHCCCeEEEEecCCCCC
Confidence 7888887 5 8899999999999999999999999999999755
No 98
>1cp2_A CP2, nitrogenase iron protein; oxidoreductase; 1.93A {Clostridium pasteurianum} SCOP: c.37.1.10
Probab=86.39 E-value=0.82 Score=44.57 Aligned_cols=42 Identities=29% Similarity=0.470 Sum_probs=38.4
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccccc
Q 007533 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLN 44 (599)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~dpyln 44 (599)
||-|.|+ | =-|.||=.+|+.++..|..+|+||-.+-.||.-|
T Consensus 1 M~vI~vs-~-KGGvGKTT~a~nLA~~la~~G~~VlliD~D~q~~ 42 (269)
T 1cp2_A 1 MRQVAIY-G-KGGIGKSTTTQNLTSGLHAMGKTIMVVGCDPKAD 42 (269)
T ss_dssp CEEEEEE-E-CTTSSHHHHHHHHHHHHHTTTCCEEEEEECTTSC
T ss_pred CcEEEEe-c-CCCCcHHHHHHHHHHHHHHCCCcEEEEcCCCCCC
Confidence 7888886 5 8899999999999999999999999999999754
No 99
>1z0s_A Probable inorganic polyphosphate/ATP-NAD kinase; ATP-binding, structural genomics, NADP, PSI, protein structure initiative; HET: ATP; 1.70A {Archaeoglobus fulgidus} SCOP: e.52.1.1 PDB: 1z0u_A* 1z0z_A* 1suw_A*
Probab=85.79 E-value=0.44 Score=48.61 Aligned_cols=72 Identities=26% Similarity=0.233 Sum_probs=50.6
Q ss_pred ceEEEEEeecCCCcchHHHHHHHHHHcCCcceeeeEEEEecCCCCCCccccCCchhhhHHHHhccCCCEEEeCCCCCCCc
Q 007533 295 PVRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRG 374 (599)
Q Consensus 295 ~v~IaiVGkY~~l~DaY~SIi~AL~haG~~~~v~v~i~wi~s~~le~~~~~~~p~~y~~a~~~L~~~DGIlVPGGfG~rg 374 (599)
.+||+++++...- ...+.+.|+..|+++.+ +.+.- +.+.++|.||+-||-|+
T Consensus 29 ~mki~iv~~~~~~---~~~l~~~L~~~g~~v~~-------~~~~~----------------~~~~~~DlvIvlGGDGT-- 80 (278)
T 1z0s_A 29 GMRAAVVYKTDGH---VKRIEEALKRLEVEVEL-------FNQPS----------------EELENFDFIVSVGGDGT-- 80 (278)
T ss_dssp -CEEEEEESSSTT---HHHHHHHHHHTTCEEEE-------ESSCC----------------GGGGGSSEEEEEECHHH--
T ss_pred ceEEEEEeCCcHH---HHHHHHHHHHCCCEEEE-------ccccc----------------cccCCCCEEEEECCCHH--
Confidence 5799999875532 56788999999987633 21110 24568899999997552
Q ss_pred hhHHHHHHHHHHHcCCCEEEEehh
Q 007533 375 VQGKILAAKYAREHRIPYLGICLG 398 (599)
Q Consensus 375 ~eg~i~aik~are~~iP~LGICLG 398 (599)
++.+++.+... +|++||=+|
T Consensus 81 ---~L~aa~~~~~~-~PilGIN~G 100 (278)
T 1z0s_A 81 ---ILRILQKLKRC-PPIFGINTG 100 (278)
T ss_dssp ---HHHHHTTCSSC-CCEEEEECS
T ss_pred ---HHHHHHHhCCC-CcEEEECCC
Confidence 55677766555 999999887
No 100
>3zq6_A Putative arsenical pump-driving ATPase; tail-anchored, membrane protein; HET: ADP; 2.11A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=85.11 E-value=0.74 Score=47.14 Aligned_cols=41 Identities=22% Similarity=0.426 Sum_probs=37.1
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccc
Q 007533 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPY 42 (599)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~dpy 42 (599)
||-|+|++| -.|.||=.+|++++..|..+|.||-.+-.||-
T Consensus 13 m~~i~v~sg-KGGvGKTTvA~~LA~~lA~~G~rVLlvD~D~~ 53 (324)
T 3zq6_A 13 KTTFVFIGG-KGGVGKTTISAATALWMARSGKKTLVISTDPA 53 (324)
T ss_dssp BCEEEEEEE-STTSSHHHHHHHHHHHHHHTTCCEEEEECCSS
T ss_pred CeEEEEEeC-CCCchHHHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence 567778877 78999999999999999999999999999984
No 101
>3fwy_A Light-independent protochlorophyllide reductase I ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2}
Probab=84.69 E-value=1.3 Score=45.57 Aligned_cols=44 Identities=32% Similarity=0.440 Sum_probs=39.7
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccccCC
Q 007533 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNTD 46 (599)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~dpyln~d 46 (599)
+|.|-|+| ==|+||=.||+.|+..|..+|+||-.|=+||+.|.-
T Consensus 48 aKVIAIaG--KGGVGKTTtavNLA~aLA~~GkkVllID~Dpq~~s~ 91 (314)
T 3fwy_A 48 AKVFAVYG--KGGIGKSTTSSNLSAAFSILGKRVLQIGCDPKHDST 91 (314)
T ss_dssp CEEEEEEC--STTSSHHHHHHHHHHHHHHTTCCEEEEEESSSCCTT
T ss_pred ceEEEEEC--CCccCHHHHHHHHHHHHHHCCCeEEEEecCCCCccc
Confidence 47889995 669999999999999999999999999999988743
No 102
>1wcv_1 SOJ, segregation protein; ATPase, bacterial, chromosome segregation; 1.6A {Thermus thermophilus} PDB: 2bej_A* 2bek_A*
Probab=82.90 E-value=1.2 Score=43.43 Aligned_cols=43 Identities=28% Similarity=0.444 Sum_probs=37.7
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccccc
Q 007533 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLN 44 (599)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~dpyln 44 (599)
||-|.|+++ -.|.||=.+|+.++..|..+|+||-.+.+||.-|
T Consensus 6 ~~vI~v~s~-kGGvGKTt~a~~LA~~la~~g~~VlliD~D~~~~ 48 (257)
T 1wcv_1 6 VRRIALANQ-KGGVGKTTTAINLAAYLARLGKRVLLVDLDPQGN 48 (257)
T ss_dssp CCEEEECCS-SCCHHHHHHHHHHHHHHHHTTCCEEEEECCTTCH
T ss_pred CEEEEEEeC-CCCchHHHHHHHHHHHHHHCCCCEEEEECCCCcC
Confidence 577888764 5789999999999999999999999999999644
No 103
>3ug7_A Arsenical pump-driving ATPase; tail-anchored, membrane protein, targeting factor, ATP-bindi TRC40, ARSA, nucleotide-binding; HET: ADP; 2.90A {Methanocaldococcus jannaschii} PDB: 3ug6_A*
Probab=81.49 E-value=1.5 Score=45.54 Aligned_cols=41 Identities=32% Similarity=0.536 Sum_probs=36.7
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccc
Q 007533 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPY 42 (599)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~dpy 42 (599)
||-|+|++| -.|.||=.+|++++..|..+|.||-.+-.||-
T Consensus 25 ~~~i~v~sg-KGGvGKTTvA~~LA~~lA~~G~rVLlvD~D~~ 65 (349)
T 3ug7_A 25 GTKYIMFGG-KGGVGKTTMSAATGVYLAEKGLKVVIVSTDPA 65 (349)
T ss_dssp SCEEEEEEC-SSSTTHHHHHHHHHHHHHHSSCCEEEEECCTT
T ss_pred CCEEEEEeC-CCCccHHHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 456777776 78999999999999999999999999999984
No 104
>3pg5_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 3.30A {Corynebacterium diphtheriae}
Probab=81.48 E-value=1.5 Score=45.63 Aligned_cols=45 Identities=22% Similarity=0.366 Sum_probs=41.0
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccccCC
Q 007533 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNTD 46 (599)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~dpyln~d 46 (599)
||.|.|+++ --|.||=.+|+.++..|..+|.||-.|-+||.-|.-
T Consensus 1 MkvIav~s~-KGGvGKTT~a~nLA~~LA~~G~rVLlID~D~q~~~~ 45 (361)
T 3pg5_A 1 MRTISFFNN-KGGVGKTTLSTNVAHYFALQGKRVLYVDCDPQCNAT 45 (361)
T ss_dssp CEEEEBCCS-SCCHHHHHHHHHHHHHHHHTTCCEEEEECCTTCTTH
T ss_pred CeEEEEEcC-CCCCcHHHHHHHHHHHHHhCCCcEEEEEcCCCCChh
Confidence 888999877 789999999999999999999999999999986643
No 105
>1nks_A Adenylate kinase; thermophilic, transferase; HET: AMP ADP; 2.57A {Sulfolobus acidocaldarius} SCOP: c.37.1.1
Probab=81.00 E-value=1.1 Score=40.75 Aligned_cols=36 Identities=31% Similarity=0.458 Sum_probs=32.4
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 007533 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (599)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k 38 (599)
|++|+++|. +|-||...|..|...|...|+++..+-
T Consensus 1 M~~I~i~G~--~GsGKsT~~~~L~~~l~~~g~~~~~~~ 36 (194)
T 1nks_A 1 MKIGIVTGI--PGVGKSTVLAKVKEILDNQGINNKIIN 36 (194)
T ss_dssp CEEEEEEEC--TTSCHHHHHHHHHHHHHTTTCCEEEEE
T ss_pred CeEEEEECC--CCCCHHHHHHHHHHHHHhcCceEEEEE
Confidence 899999995 899999999999999999999887763
No 106
>1byi_A Dethiobiotin synthase; biotin synthesis, cyclo-ligase, ligase; 0.97A {Escherichia coli} SCOP: c.37.1.10 PDB: 1bs1_A* 1a82_A 1dad_A* 1dae_A* 1daf_A* 1dag_A* 1dah_A* 1dai_A* 1dak_A* 1dam_A* 1dbs_A 1dts_A
Probab=79.05 E-value=2.3 Score=40.04 Aligned_cols=40 Identities=30% Similarity=0.355 Sum_probs=34.3
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccc
Q 007533 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYL 43 (599)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~dpyl 43 (599)
+|-|+||++ =.|.||=.+|+.++..|..+|+||-. +||-.
T Consensus 1 ~k~I~v~s~-kgGvGKTt~a~nLa~~la~~G~rVll--~dp~~ 40 (224)
T 1byi_A 1 SKRYFVTGT-DTEVGKTVASCALLQAAKAAGYRTAG--YKPVA 40 (224)
T ss_dssp CEEEEEEES-STTSCHHHHHHHHHHHHHHTTCCEEE--ECSEE
T ss_pred CceEEEEEC-CCCCCHHHHHHHHHHHHHHCCCCEEE--Eccee
Confidence 477888875 57999999999999999999999998 56744
No 107
>3pfn_A NAD kinase; structural genomics consortium, SNP, SGC, transferase; 2.70A {Homo sapiens}
Probab=79.04 E-value=1.6 Score=46.07 Aligned_cols=90 Identities=17% Similarity=0.230 Sum_probs=54.7
Q ss_pred eEEEEEeecCC--CcchHHHHHHHHHHcCCcceeeeEEEEecCCCCCCccccCCchhhh-----------HHHHhccCCC
Q 007533 296 VRIAMVGKYTG--LSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYK-----------AAWKLLKGAD 362 (599)
Q Consensus 296 v~IaiVGkY~~--l~DaY~SIi~AL~haG~~~~v~v~i~wi~s~~le~~~~~~~p~~y~-----------~a~~~L~~~D 362 (599)
-+|+||+|+.+ .......+.+.|...|+.+.+ +..-.+......+ ..|. ...+.-..+|
T Consensus 39 k~I~iv~K~~~~~~~~~~~~l~~~L~~~~~~V~v-------e~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~D 110 (365)
T 3pfn_A 39 KSVLVIKKMRDASLLQPFKELCTHLMEENMIVYV-------EKKVLEDPAIASD-ESFGAVKKKFCTFREDYDDISNQID 110 (365)
T ss_dssp CEEEEEECTTCGGGHHHHHHHHHHHHHTSCEEEE-------EHHHHHSHHHHHC-STTHHHHHHCEEECTTTCCCTTTCS
T ss_pred CEEEEEecCCCHHHHHHHHHHHHHHHHCCCEEEE-------ehHHhhhhccccc-cccccccccccccccChhhcccCCC
Confidence 47999999864 234466889999998866533 2110000000000 0000 0001236789
Q ss_pred EEEeCCCCCCCchhHHHHHHHHHHHcCCCEEEEehh
Q 007533 363 GILVPGGFGNRGVQGKILAAKYAREHRIPYLGICLG 398 (599)
Q Consensus 363 GIlVPGGfG~rg~eg~i~aik~are~~iP~LGICLG 398 (599)
-||+-||-|+ ++.+++++....+|+|||=+|
T Consensus 111 lvI~lGGDGT-----~L~aa~~~~~~~~PvlGiN~G 141 (365)
T 3pfn_A 111 FIICLGGDGT-----LLYASSLFQGSVPPVMAFHLG 141 (365)
T ss_dssp EEEEESSTTH-----HHHHHHHCSSSCCCEEEEESS
T ss_pred EEEEEcChHH-----HHHHHHHhccCCCCEEEEcCC
Confidence 9999998763 667777777778999999887
No 108
>1ls1_A Signal recognition particle protein; FFH, SRP54, SRP, GTPase, ultrahigh resolution, protein transport; 1.10A {Thermus aquaticus} SCOP: a.24.13.1 c.37.1.10 PDB: 1jpn_B* 1jpj_A* 1ry1_U* 2j45_A* 1o87_A* 2c04_A* 2j46_A* 1rj9_B* 2c03_A* 2j7p_A* 1okk_A* 2cnw_A* 1ng1_A* 2xkv_A 3ng1_A 1ffh_A 2ng1_A*
Probab=78.48 E-value=13 Score=37.33 Aligned_cols=40 Identities=25% Similarity=0.361 Sum_probs=35.8
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccc
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYL 43 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~dpyl 43 (599)
+.|.++| .+|.||=.++..++.+++..|.+|..+-.|++-
T Consensus 99 ~~i~i~g--~~G~GKTT~~~~la~~~~~~~~~v~l~~~d~~~ 138 (295)
T 1ls1_A 99 NLWFLVG--LQGSGKTTTAAKLALYYKGKGRRPLLVAADTQR 138 (295)
T ss_dssp EEEEEEC--CTTTTHHHHHHHHHHHHHHTTCCEEEEECCSSC
T ss_pred eEEEEEC--CCCCCHHHHHHHHHHHHHHcCCeEEEecCCccc
Confidence 5677885 499999999999999999999999999999874
No 109
>3bhn_A THIJ/PFPI domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.76A {Shewanella loihica pv-4}
Probab=76.55 E-value=0.56 Score=46.38 Aligned_cols=99 Identities=17% Similarity=0.133 Sum_probs=52.6
Q ss_pred ceEEEEEeecCCCcch-HHHHHHHHHHcCCcceeeeEEEEecCCCCCCc---cccCCchhhhHHHHhccCCCEEEeCCC-
Q 007533 295 PVRIAMVGKYTGLSDA-YLSILKALLHASVDLRKKLVIDWIPACDLEDA---TEKENPDAYKAAWKLLKGADGILVPGG- 369 (599)
Q Consensus 295 ~v~IaiVGkY~~l~Da-Y~SIi~AL~haG~~~~v~v~i~wi~s~~le~~---~~~~~p~~y~~a~~~L~~~DGIlVPGG- 369 (599)
..||+++ =|..+.+. .....+.|+.++.. ..+.+.. +...+... ....+. .+ +....+|.|+||||
T Consensus 20 ~~kV~il-l~dGf~~~e~~~p~dvl~~~~~~--~~v~~vs-~~~~V~ss~G~~v~~d~-~l----~~~~~~D~liVPGG~ 90 (236)
T 3bhn_A 20 MYKVGIV-LFDDFTDVDFFLMNDLLGRTSDS--WTVRILG-TKPEHHSQLGMTVKTDG-HV----SEVKEQDVVLITSGY 90 (236)
T ss_dssp CEEEEEE-CCTTBCHHHHHHHHHHHTTCSSS--EEEEEEE-SSSEEEBTTCCEEECSE-EG----GGGGGCSEEEECCCT
T ss_pred CCEEEEE-eCCCChHHHHHHHHHHHHcCCCC--EEEEEEE-CCCcEEecCCcEEecCc-cc----ccccCCCEEEEcCCc
Confidence 4678888 36555433 44677778765421 1222222 11111100 000010 11 22567899999999
Q ss_pred CCCCc---hhHHHHHHHHHHHcCC-CEEEEehhHHHHHH
Q 007533 370 FGNRG---VQGKILAAKYAREHRI-PYLGICLGMQVAVI 404 (599)
Q Consensus 370 fG~rg---~eg~i~aik~are~~i-P~LGICLGmQll~i 404 (599)
+|.+. .+..+..+ +.+++. ++.+||-|-.+|+-
T Consensus 91 ~g~~~l~~~~~l~~~L--~~~~~~~~IaaIC~G~~lLa~ 127 (236)
T 3bhn_A 91 RGIPAALQDENFMSAL--KLDPSRQLIGSICAGSFVLHE 127 (236)
T ss_dssp THHHHHHTCHHHHHHC--CCCTTTCEEEEETTHHHHHHH
T ss_pred cCHhhhccCHHHHHHH--HhCCCCCEEEEEcHHHHHHHH
Confidence 56432 23344455 233445 99999999998863
No 110
>3io3_A DEHA2D07832P; chaperone, membrane traffic, ATPase; HET: ADP; 1.80A {Debaryomyces hansenii}
Probab=76.25 E-value=2.4 Score=44.26 Aligned_cols=40 Identities=35% Similarity=0.531 Sum_probs=36.6
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHH--HCCCeeEEeeeccc
Q 007533 1 MKYVLVTGGVVSGLGKGVTASSIGVLLK--ACGLRVTCIKIDPY 42 (599)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~~s~g~ll~--~~g~~v~~~k~dpy 42 (599)
+|++|++| -.|.||=.+|+.++..|. ..|.||-.+-.||-
T Consensus 18 ~~i~~~~g--kGGvGKTt~a~~lA~~la~~~~g~~vllid~D~~ 59 (348)
T 3io3_A 18 LKWIFVGG--KGGVGKTTTSSSVAVQLALAQPNEQFLLISTDPA 59 (348)
T ss_dssp CSEEEEEC--STTSSHHHHHHHHHHHHHHHCTTSCEEEEECCSS
T ss_pred cEEEEEeC--CCCCcHHHHHHHHHHHHHHhcCCCeEEEEECCCC
Confidence 46788887 889999999999999999 99999999999985
No 111
>2oze_A ORF delta'; para, walker type atpases, DNA segregation, PSM19035, plasmid, DNA binding protein; HET: AGS EPE; 1.83A {Streptococcus pyogenes}
Probab=76.03 E-value=2.4 Score=42.09 Aligned_cols=42 Identities=19% Similarity=0.266 Sum_probs=35.6
Q ss_pred EEEEeCC-ccCCcchHHHHHHHHHHHHHCCCeeEEeeeccccc
Q 007533 3 YVLVTGG-VVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLN 44 (599)
Q Consensus 3 ~i~vtgg-v~s~~gkgi~~~s~g~ll~~~g~~v~~~k~dpyln 44 (599)
-|.|++. .=.|.||=.+|+.++..|..+|+||-.|..||.-|
T Consensus 36 ~i~v~~~s~KGGvGKTT~a~nLA~~la~~G~rVlliD~D~q~~ 78 (298)
T 2oze_A 36 AIVILNNYFKGGVGKSKLSTMFAYLTDKLNLKVLMIDKDLQAT 78 (298)
T ss_dssp CEEEEECCSSSSSSHHHHHHHHHHHHHHTTCCEEEEEECTTCH
T ss_pred EEEEEeccCCCCchHHHHHHHHHHHHHhCCCeEEEEeCCCCCC
Confidence 3445442 56789999999999999999999999999999865
No 112
>3iqw_A Tail-anchored protein targeting factor GET3; ATPase, Zn binding, protein transport; HET: ANP; 3.00A {Chaetomium thermophilum} PDB: 3iqx_A* 3ibg_A*
Probab=76.02 E-value=2.3 Score=44.06 Aligned_cols=40 Identities=28% Similarity=0.486 Sum_probs=35.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccc
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYL 43 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~dpyl 43 (599)
|++|++| -.|.||=.+|++++..|..+|.||-.+-.||--
T Consensus 17 ~i~~~sg--kGGvGKTt~a~~lA~~la~~g~~vllid~D~~~ 56 (334)
T 3iqw_A 17 RWIFVGG--KGGVGKTTTSCSLAIQLAKVRRSVLLLSTDPAH 56 (334)
T ss_dssp CEEEEEC--STTSSHHHHHHHHHHHHTTSSSCEEEEECCSSC
T ss_pred EEEEEeC--CCCccHHHHHHHHHHHHHhCCCcEEEEECCCCC
Confidence 5666555 789999999999999999999999999999743
No 113
>1ihu_A Arsenical pump-driving ATPase; aluminum fluoride, ADP, ARSA ATPase, ATP binding site, hydro; HET: ADP; 2.15A {Escherichia coli} SCOP: c.37.1.10 c.37.1.10 PDB: 1f48_A* 1ii0_A* 1ii9_A*
Probab=74.98 E-value=2.9 Score=46.21 Aligned_cols=40 Identities=30% Similarity=0.496 Sum_probs=35.7
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccc
Q 007533 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPY 42 (599)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~dpy 42 (599)
+|++|++|- .|.||=.+|+.++..|..+|.||-.+-.||-
T Consensus 8 ~~i~~~sgk--GGvGKTT~a~~lA~~lA~~G~rVLlvd~D~~ 47 (589)
T 1ihu_A 8 PPYLFFTGK--GGVGKTSISCATAIRLAEQGKRVLLVSTDPA 47 (589)
T ss_dssp CSEEEEECS--TTSSHHHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred CEEEEEeCC--CcCHHHHHHHHHHHHHHHCCCcEEEEECCCC
Confidence 367777764 9999999999999999999999999999983
No 114
>3bfv_A CAPA1, CAPB2, membrane protein CAPA1, protein tyrosine kinase; chimerical protein, P-loop protein, capsule biogenesis/degradation; HET: ADP; 1.80A {Staphylococcus aureus} PDB: 2ved_A*
Probab=73.85 E-value=4 Score=40.69 Aligned_cols=41 Identities=20% Similarity=0.352 Sum_probs=36.2
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccc
Q 007533 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPY 42 (599)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~dpy 42 (599)
+|-|+||+. -.|.||=.+|+.++..|...|.||-.|-.||.
T Consensus 82 ~kvI~vts~-kgG~GKTt~a~nLA~~lA~~G~rVLLID~D~~ 122 (271)
T 3bfv_A 82 VQSIVITSE-APGAGKSTIAANLAVAYAQAGYKTLIVDGDMR 122 (271)
T ss_dssp CCEEEEECS-STTSSHHHHHHHHHHHHHHTTCCEEEEECCSS
T ss_pred CeEEEEECC-CCCCcHHHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 467888864 56999999999999999999999999999964
No 115
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=73.44 E-value=3.3 Score=40.74 Aligned_cols=34 Identities=41% Similarity=0.654 Sum_probs=29.0
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 007533 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (599)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~dp 41 (599)
|| |+||||- |-+.+.+-..|.++|++|+.+--+|
T Consensus 1 Mk-ILVTGat------GfIG~~L~~~L~~~G~~V~~l~R~~ 34 (298)
T 4b4o_A 1 MR-VLVGGGT------GFIGTALTQLLNARGHEVTLVSRKP 34 (298)
T ss_dssp CE-EEEETTT------SHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CE-EEEECCC------CHHHHHHHHHHHHCCCEEEEEECCC
Confidence 88 9999964 8888999999999999999985543
No 116
>2f1r_A Molybdopterin-guanine dinucleotide biosynthesis protein B (MOBB); structural genomics, PSI, protein structure initiative; 2.10A {Archaeoglobus fulgidus}
Probab=73.02 E-value=2.6 Score=39.39 Aligned_cols=40 Identities=25% Similarity=0.331 Sum_probs=34.1
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccc
Q 007533 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPY 42 (599)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~dpy 42 (599)
|+.|.|+| -||-||=.++..|..+++..|+++-.||+|+.
T Consensus 2 ~~~v~IvG--~SGsGKSTL~~~L~~~~~~~g~~~G~I~~dg~ 41 (171)
T 2f1r_A 2 SLILSIVG--TSDSGKTTLITRMMPILRERGLRVAVVKRHAH 41 (171)
T ss_dssp -CEEEEEE--SCHHHHHHHHHHHHHHHHHTTCCEEEEEC---
T ss_pred ceEEEEEC--CCCCCHHHHHHHHHHHhhhcCCceEEEEEcCc
Confidence 57888999 79999999999999999999999999999874
No 117
>2woo_A ATPase GET3; tail-anchored, membrane protein, targeting factor, endoplasmic reticulum, TRC40, ATP-binding, golgi apparatus; 3.01A {Schizosaccharomyces pombe}
Probab=72.79 E-value=2.8 Score=42.92 Aligned_cols=40 Identities=28% Similarity=0.413 Sum_probs=35.2
Q ss_pred EEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccc
Q 007533 3 YVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYL 43 (599)
Q Consensus 3 ~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~dpyl 43 (599)
-|+||+| --|.||=.+|+.++..|..+|+||-.+-.||.-
T Consensus 20 ~i~v~sg-kGGvGKTTva~~LA~~lA~~G~rVllvD~D~~~ 59 (329)
T 2woo_A 20 KWIFVGG-KGGVGKTTTSCSLAIQMSKVRSSVLLISTDPAH 59 (329)
T ss_dssp CEEEEEC-SSSSSHHHHHHHHHHHHHTSSSCEEEEECCTTC
T ss_pred EEEEEeC-CCCCcHHHHHHHHHHHHHHCCCeEEEEECCCCc
Confidence 4566666 689999999999999999999999999999953
No 118
>2woj_A ATPase GET3; tail-anchored, membrane protein, targeting factor, endoplasmic reticulum, TRC40, ATP-binding, golgi apparatus; HET: ADP; 1.99A {Saccharomyces cerevisiae} PDB: 3h84_A 3zs8_A 3zs9_A* 3sja_A 3sjb_A 3sjc_A 3sjd_A* 3idq_A 3a36_A 3a37_A*
Probab=72.78 E-value=2.4 Score=44.17 Aligned_cols=42 Identities=26% Similarity=0.401 Sum_probs=35.9
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHH--HCCCeeEEeeeccccc
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLK--ACGLRVTCIKIDPYLN 44 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~--~~g~~v~~~k~dpyln 44 (599)
|-|.||+| --|.||=.+|++++..|. .+|.||-.+..||--|
T Consensus 18 ~~i~v~sg-KGGvGKTTvaanLA~~lA~~~~G~rVLLvD~D~~~~ 61 (354)
T 2woj_A 18 HKWIFVGG-KGGVGKTTSSCSIAIQMALSQPNKQFLLISTDPAHN 61 (354)
T ss_dssp CCEEEEEE-STTSSHHHHHHHHHHHHHHHCTTSCEEEEECCSSCC
T ss_pred cEEEEEeC-CCCCcHHHHHHHHHHHHHHhcCCCeEEEEECCCCCC
Confidence 34566666 789999999999999999 9999999999998533
No 119
>2z0h_A DTMP kinase, thymidylate kinase; ATP-binding, nucleotide biosynthesis, nucleotide-binding, transferase, structural genomics, NPPSFA; HET: ADP TYD; 2.10A {Thermotoga maritima} PDB: 3hjn_A*
Probab=71.64 E-value=4.7 Score=36.82 Aligned_cols=33 Identities=21% Similarity=0.335 Sum_probs=28.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEE
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTC 36 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~ 36 (599)
++|++||+ +|-||+..+.-+...|+..|+.|..
T Consensus 1 ~~I~l~G~--~GsGKsT~~~~L~~~l~~~g~~v~~ 33 (197)
T 2z0h_A 1 MFITFEGI--DGSGKSTQIQLLAQYLEKRGKKVIL 33 (197)
T ss_dssp CEEEEECS--TTSSHHHHHHHHHHHHHHCCC-EEE
T ss_pred CEEEEECC--CCCCHHHHHHHHHHHHHHCCCeEEE
Confidence 37999997 7889999999999999999998853
No 120
>3cwq_A Para family chromosome partitioning protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: ADP; 2.47A {Synechocystis SP}
Probab=71.26 E-value=4 Score=38.70 Aligned_cols=40 Identities=28% Similarity=0.353 Sum_probs=33.8
Q ss_pred EEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccccc
Q 007533 3 YVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLN 44 (599)
Q Consensus 3 ~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~dpyln 44 (599)
.|.|++ -=.|.||=.+|+.++..|..+| +|..+..||.-|
T Consensus 2 vI~v~s-~KGGvGKTT~a~~LA~~la~~g-~VlliD~D~q~~ 41 (209)
T 3cwq_A 2 IITVAS-FKGGVGKTTTAVHLSAYLALQG-ETLLIDGDPNRS 41 (209)
T ss_dssp EEEEEE-SSTTSSHHHHHHHHHHHHHTTS-CEEEEEECTTCH
T ss_pred EEEEEc-CCCCCcHHHHHHHHHHHHHhcC-CEEEEECCCCCC
Confidence 455554 3578999999999999999999 999999999643
No 121
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=70.04 E-value=2.3 Score=40.45 Aligned_cols=34 Identities=29% Similarity=0.400 Sum_probs=24.9
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 007533 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (599)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~d 40 (599)
||-++||||- +|||+.++ +.|..+|++|...=.+
T Consensus 1 Mk~vlVTGas-~gIG~~~a-----~~l~~~G~~V~~~~r~ 34 (230)
T 3guy_A 1 MSLIVITGAS-SGLGAELA-----KLYDAEGKATYLTGRS 34 (230)
T ss_dssp --CEEEESTT-SHHHHHHH-----HHHHHTTCCEEEEESC
T ss_pred CCEEEEecCC-chHHHHHH-----HHHHHCCCEEEEEeCC
Confidence 8999999996 88887654 5677889998876443
No 122
>1gtv_A TMK, thymidylate kinase; transferase, transferase (ATP:TMP phosphotransferase); HET: TYD TMP; 1.55A {Mycobacterium tuberculosis} SCOP: c.37.1.1 PDB: 1g3u_A* 1gsi_A* 1mrn_A* 1mrs_A* 1n5i_A* 1n5j_A* 1n5k_A* 1n5l_A* 1w2g_A* 1w2h_A*
Probab=69.89 E-value=1.9 Score=40.18 Aligned_cols=36 Identities=22% Similarity=0.415 Sum_probs=31.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~ 39 (599)
++|.|+| .||-||...+..|...|...|++|..++-
T Consensus 1 ~~I~i~G--~~GsGKsTl~~~L~~~l~~~g~~v~~~~~ 36 (214)
T 1gtv_A 1 MLIAIEG--VDGAGKRTLVEKLSGAFRAAGRSVATLAF 36 (214)
T ss_dssp CEEEEEE--EEEEEHHHHHHHHHHHHHEEEEEEEEEES
T ss_pred CEEEEEc--CCCCCHHHHHHHHHHHHHhcCCeEEEEee
Confidence 4788888 68999999999999999999999987763
No 123
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=67.49 E-value=4.9 Score=40.88 Aligned_cols=94 Identities=26% Similarity=0.262 Sum_probs=49.2
Q ss_pred eEEEEEeecCCC--cchHHHHHHHHHHcCCcceeeeEEEEecCCCCCCccc-c------C-CchhhhHHHHhccCCCEEE
Q 007533 296 VRIAMVGKYTGL--SDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATE-K------E-NPDAYKAAWKLLKGADGIL 365 (599)
Q Consensus 296 v~IaiVGkY~~l--~DaY~SIi~AL~haG~~~~v~v~i~wi~s~~le~~~~-~------~-~p~~y~~a~~~L~~~DGIl 365 (599)
.+|+++.+..+- ......+.+.|+..|+++.+.. ...+++.+... . . +...+........++|.|+
T Consensus 5 ~ki~iI~n~~~~~~~~~~~~l~~~L~~~g~~v~~~~----~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~vi 80 (307)
T 1u0t_A 5 RSVLLVVHTGRDEATETARRVEKVLGDNKIALRVLS----AEAVDRGSLHLAPDDMRAMGVEIEVVDADQHAADGCELVL 80 (307)
T ss_dssp CEEEEEESSSGGGGSHHHHHHHHHHHTTTCEEEEEC---------------------------------------CCCEE
T ss_pred CEEEEEEeCCCHHHHHHHHHHHHHHHHCCCEEEEec----chhhhhhcccccccccccccccccccccccccccCCCEEE
Confidence 379999876542 2235578888999888754321 11111100000 0 0 0000000001345789999
Q ss_pred eCCCCCCCchhHHHHHHHHHHHcCCCEEEEehh
Q 007533 366 VPGGFGNRGVQGKILAAKYAREHRIPYLGICLG 398 (599)
Q Consensus 366 VPGGfG~rg~eg~i~aik~are~~iP~LGICLG 398 (599)
+-||-|+ +..+++.+...++|+|||=+|
T Consensus 81 ~~GGDGT-----~l~a~~~~~~~~~pvlgi~~G 108 (307)
T 1u0t_A 81 VLGGDGT-----FLRAAELARNASIPVLGVNLG 108 (307)
T ss_dssp EEECHHH-----HHHHHHHHHHHTCCEEEEECS
T ss_pred EEeCCHH-----HHHHHHHhccCCCCEEEEeCC
Confidence 9997552 567788877789999999776
No 124
>3ksm_A ABC-type sugar transport system, periplasmic COMP; periplasmic component, PSI- 11023L, structural genomics, protein structure initiative; HET: BDR; 1.90A {Hahella chejuensis}
Probab=66.91 E-value=18 Score=34.21 Aligned_cols=86 Identities=15% Similarity=0.130 Sum_probs=44.1
Q ss_pred eEEEEEeecCCCcchH-HHHHHHHHHcCCcceeeeEEEEecCCCCCCccccCCchhhhHHHHhc--cC-CCEEEeCCCCC
Q 007533 296 VRIAMVGKYTGLSDAY-LSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLL--KG-ADGILVPGGFG 371 (599)
Q Consensus 296 v~IaiVGkY~~l~DaY-~SIi~AL~haG~~~~v~v~i~wi~s~~le~~~~~~~p~~y~~a~~~L--~~-~DGIlVPGGfG 371 (599)
++||++-. ...+.| ..+++.++.+..+....+.+.+.++. .+++...+..+.+ .+ +||||+.+...
T Consensus 1 ~~Ig~i~~--~~~~~~~~~~~~gi~~~~~~~g~~~~~~~~~~~--------~~~~~~~~~i~~l~~~~~vdgii~~~~~~ 70 (276)
T 3ksm_A 1 PKLLLVLK--GDSNAYWRQVYLGAQKAADEAGVTLLHRSTKDD--------GDIAGQIQILSYHLSQAPPDALILAPNSA 70 (276)
T ss_dssp CEEEEECS--CSSSTHHHHHHHHHHHHHHHHTCEEEECCCSST--------TCHHHHHHHHHHHHHHSCCSEEEECCSST
T ss_pred CeEEEEeC--CCCChHHHHHHHHHHHHHHHcCCEEEEECCCCC--------CCHHHHHHHHHHHHHhCCCCEEEEeCCCH
Confidence 47888843 334443 35666655554444443333332221 1121111222222 46 99999987422
Q ss_pred CCchhHHHHHHHHHHHcCCCEEEE
Q 007533 372 NRGVQGKILAAKYAREHRIPYLGI 395 (599)
Q Consensus 372 ~rg~eg~i~aik~are~~iP~LGI 395 (599)
. . ....++.+.+.++|+.-+
T Consensus 71 ~-~---~~~~~~~~~~~~ipvV~~ 90 (276)
T 3ksm_A 71 E-D---LTPSVAQYRARNIPVLVV 90 (276)
T ss_dssp T-T---THHHHHHHHHTTCCEEEE
T ss_pred H-H---HHHHHHHHHHCCCcEEEE
Confidence 1 1 234566777889998765
No 125
>2obn_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, unknown function; HET: PG4; 2.30A {Anabaena variabilis}
Probab=65.19 E-value=27 Score=36.51 Aligned_cols=153 Identities=18% Similarity=0.165 Sum_probs=92.4
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccccCCCCCCCccccceEEEccCCccccCCCCccccccCC
Q 007533 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFMDI 80 (599)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~dpyln~d~gtmsp~~hgevfv~~dg~e~dldlg~yerfl~~ 80 (599)
+|-|||||= =+++||=.++..|-+.|+.+|+++..+|-- |-|..- +|.-.-+|-
T Consensus 152 ~k~i~v~GT-D~~VGK~~ts~~L~~~l~~~G~~a~~~~tg-------------qtg~~~---~~~gi~~Da--------- 205 (349)
T 2obn_A 152 CRRVLTVGT-DMAIGKMSTSLELHWAAKLRGWRSKFLATG-------------QTGVML---EGDGVALDA--------- 205 (349)
T ss_dssp SEEEEEEES-SSSSSHHHHHHHHHHHHHHTTCCEEEECCS-------------HHHHHH---HSCSCCGGG---------
T ss_pred ceEEEEcCC-CccccceeHHHHHHHHHHhcCCcEEEEecc-------------chhhhh---hcCCcchhH---------
Confidence 367899986 777999999999999999999999985422 333210 111111111
Q ss_pred CCCCCCcccchHhhHHHHhhhhcCCCCCCeeEEcccchHHHHHHHHHHhcccCCCCCCCCcEEEEeeCccccccccchHH
Q 007533 81 KLTRDNNITTGKIYQSVIDKERKGDYLGKTVQVVPHITDEIQDWIERVAMIPVDGKEGPVDVCVIELGGTIGDIESMPFI 160 (599)
Q Consensus 81 ~l~~~~n~ttgkiy~~vi~ker~g~ylg~tvqviphit~~i~~~i~~~~~~p~d~~~~~~dv~i~e~ggtvgdies~pf~ 160 (599)
--....+| ++.+-+.+. .+++|+++||==|-+--=-+.-.+
T Consensus 206 ---v~~df~aG----------------------------~ve~~~~~~--------~~~~d~vlVEGqGgl~~P~~~~t~ 246 (349)
T 2obn_A 206 ---VRVDFAAG----------------------------AVEQMVMRY--------GKNYDILHIEGQGSLLHPGSTATL 246 (349)
T ss_dssp ---SBHHHHHH----------------------------HHHHHHHHH--------TTTCSEEEECCCCCTTSTTCCTHH
T ss_pred ---HHHHHHhh----------------------------hHHHHHHHh--------ccCCCEEEEeCCCcccCcChHhHH
Confidence 00111112 333344443 246899999965544321122223
Q ss_pred HHHHHhhhHcCCCCEEEEeeeeeeeecCCCccccCCchhhhhhhhc--------CCCcccEEEEecCCCC
Q 007533 161 EALGQFSYRVGPGNFCLIHVSLVPVLNVVGEQKTKPTQHSVRGLRG--------QGLTPNILACRSTVAL 222 (599)
Q Consensus 161 ea~rq~~~~~g~~n~~~ihv~~vp~~~~~~e~ktkptq~sv~~Lrs--------~Gi~pd~iv~R~~~~l 222 (599)
.+-......-+.++|-.=...+..--+..--|-+|.+...+. .|+++-+|+.-....-
T Consensus 247 ----~ll~g~~p~~vILv~~~~~g~i~~~~~~~~p~l~~~i~t~e~l~~~~~~~~~~~V~Gi~lN~~~~~ 312 (349)
T 2obn_A 247 ----PLIRGSQPTQLVLVHRAGQTHNGNNPHVPIPPLPEVIRLYETVASGGGAFGTVPVVGIALNTAHLD 312 (349)
T ss_dssp ----HHHHHHCCSEEEEEEETTCCBCSSCTTSBCCCHHHHHHHHHHHHHTTTTSCCCCEEEEEEECTTSC
T ss_pred ----HHHHHcCCCeEEEEECCCCceECCCCccCCCCHHHHHHHHHHHHHhhccCCCCcEEEEEEECCCCC
Confidence 333444555689999876666755555666666776665554 6899999998875543
No 126
>1zu4_A FTSY; GTPase, signal recognition particle, SRP, receptor, protein transport; 1.95A {Mycoplasma mycoides} PDB: 1zu5_A
Probab=64.09 E-value=9.1 Score=39.26 Aligned_cols=39 Identities=21% Similarity=0.414 Sum_probs=35.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccc
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPY 42 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~dpy 42 (599)
+.|.|+| . +|-||=.+++.|+.+|+..|.+|..+-.|+|
T Consensus 106 ~vI~ivG-~-~G~GKTT~~~~LA~~l~~~g~kVllid~D~~ 144 (320)
T 1zu4_A 106 NIFMLVG-V-NGTGKTTSLAKMANYYAELGYKVLIAAADTF 144 (320)
T ss_dssp EEEEEES-S-TTSSHHHHHHHHHHHHHHTTCCEEEEECCCS
T ss_pred eEEEEEC-C-CCCCHHHHHHHHHHHHHHCCCeEEEEeCCCc
Confidence 5788887 4 9999999999999999999999999999986
No 127
>2oyn_A Hypothetical protein MJ0056; structural genomics, unknown function, PSI-2, protein structure initiative; HET: CDP; 1.85A {Methanocaldococcus jannaschii DSM2661} SCOP: b.43.5.2 PDB: 2p3m_A 2vbs_A 2vbt_A* 2vbu_A* 2vbv_A*
Probab=63.37 E-value=2.8 Score=38.80 Aligned_cols=41 Identities=34% Similarity=0.537 Sum_probs=30.6
Q ss_pred EEEEEeCCccCCcchHHHHHHH----HHHHHHCCCe----eEEeeeccc
Q 007533 2 KYVLVTGGVVSGLGKGVTASSI----GVLLKACGLR----VTCIKIDPY 42 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~----g~ll~~~g~~----v~~~k~dpy 42 (599)
|-+-++|=|+||+|+|-.--|+ -..++..||. ---+|+||.
T Consensus 5 ~~i~l~G~VvSGlGEG~~y~sl~~Y~~qf~~~LGF~PfPGTLNi~l~~~ 53 (146)
T 2oyn_A 5 KLMIIEGEVVSGLGEGRYFLSLPPYKEIFKKILGFEPYEGTLNLKLDRE 53 (146)
T ss_dssp CEEEEEEEEECCSSHHHHHTTSHHHHHHHHHHHSSCCCSSCEEEEEEEE
T ss_pred eEEEEEEEEEccccceEEEEeCHHHHHHHHHHhCCcCCCCcEEEEeCch
Confidence 5678999999999999988887 5667777873 223455554
No 128
>4fyk_A Deoxyribonucleoside 5'-monophosphate N-glycosidas; hydrolas; HET: SRA; 1.79A {Rattus norvegicus} PDB: 4fyh_A* 4fyi_A* 2klh_A*
Probab=63.36 E-value=15 Score=34.06 Aligned_cols=94 Identities=17% Similarity=0.143 Sum_probs=56.6
Q ss_pred eEEEEEeecCCC-cc--hHHHHHHHHHHcCCcceeeeEEEEecCCCCCCccc---cCCchhhhHHHHhccCCCEEEeCCC
Q 007533 296 VRIAMVGKYTGL-SD--AYLSILKALLHASVDLRKKLVIDWIPACDLEDATE---KENPDAYKAAWKLLKGADGILVPGG 369 (599)
Q Consensus 296 v~IaiVGkY~~l-~D--aY~SIi~AL~haG~~~~v~v~i~wi~s~~le~~~~---~~~p~~y~~a~~~L~~~DGIlVPGG 369 (599)
+||=+-|-.... +| .|..+.+.|+..| .+. . .|+..+++++... .....-|..-.+.+..+|.||.-..
T Consensus 3 mkIYlAGP~f~~~e~~~~~~~i~~~L~~~G-~Vl---~-~hv~~~~l~~~g~~~~~~~~~i~~~d~~~i~~aD~vvA~l~ 77 (152)
T 4fyk_A 3 RSVYFCGSIRGGREDQALYARIVSRLRRYG-KVL---T-EHVADAELEPLGEEAAGGDQFIHEQNLNWLQQADVVVAEVT 77 (152)
T ss_dssp CEEEEECCSTTCCTTHHHHHHHHHHHTTTS-EEC---C-CC-------------CCCHHHHHHHHHHHHHHCSEEEEECS
T ss_pred ceEEEECCCCCcHHHHHHHHHHHHHHHHcC-ccc---c-cccCchhhhhccccccCCHHHHHHHHHHHHHHCCEEEEeCC
Confidence 577788877553 33 4678999999998 431 1 4565544432211 1223344444556889999987543
Q ss_pred CCCCchhHHHHHHHHHHHcCCCEEEEeh
Q 007533 370 FGNRGVQGKILAAKYAREHRIPYLGICL 397 (599)
Q Consensus 370 fG~rg~eg~i~aik~are~~iP~LGICL 397 (599)
....|..--+-||...++|+++.|.
T Consensus 78 ---~~d~Gt~~EiG~A~algkPV~~l~~ 102 (152)
T 4fyk_A 78 ---QPSLGVGYELGRAVALGKPILCLFR 102 (152)
T ss_dssp ---SCCHHHHHHHHHHHHTTCCEEEEEC
T ss_pred ---CCCCCHHHHHHHHHHcCCeEEEEEe
Confidence 3345666667888899999999986
No 129
>2v3c_C SRP54, signal recognition 54 kDa protein; nucleotide-binding, signal recognition particle, GTP-binding, RNA-binding; 2.50A {Methanocaldococcus jannaschii} PDB: 3ndb_B
Probab=62.49 E-value=4.2 Score=43.62 Aligned_cols=40 Identities=30% Similarity=0.476 Sum_probs=36.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccc
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYL 43 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~dpyl 43 (599)
+.|.++|- .|.||=.+++.|+..|+.+|++|..+-.|||-
T Consensus 100 ~vI~ivG~--~GvGKTTla~~La~~l~~~G~kVllv~~D~~r 139 (432)
T 2v3c_C 100 NVILLVGI--QGSGKTTTAAKLARYIQKRGLKPALIAADTYR 139 (432)
T ss_dssp CCEEEECC--SSSSTTHHHHHHHHHHHHHHCCEEEECCSCCC
T ss_pred eEEEEECC--CCCCHHHHHHHHHHHHHHcCCeEEEEeccccC
Confidence 35778883 89999999999999999999999999999984
No 130
>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*
Probab=62.21 E-value=5.8 Score=38.02 Aligned_cols=34 Identities=26% Similarity=0.571 Sum_probs=25.9
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 007533 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (599)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~d 40 (599)
||-|+||||- +|||+.+ .+.|..+|++|...-.+
T Consensus 1 mk~vlVTGas-~gIG~~~-----a~~l~~~G~~V~~~~r~ 34 (257)
T 1fjh_A 1 MSIIVISGCA-TGIGAAT-----RKVLEAAGHQIVGIDIR 34 (257)
T ss_dssp CCEEEEETTT-SHHHHHH-----HHHHHHTTCEEEEEESS
T ss_pred CCEEEEeCCC-CHHHHHH-----HHHHHHCCCEEEEEeCC
Confidence 7899999984 7777754 45677789999876443
No 131
>3la6_A Tyrosine-protein kinase WZC; P-loop protein, nucleotide binding domain, walker A motif, B protein kinase, oligomerization; HET: ADP; 3.20A {Escherichia coli}
Probab=61.86 E-value=7.8 Score=38.97 Aligned_cols=40 Identities=18% Similarity=0.301 Sum_probs=35.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccc
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPY 42 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~dpy 42 (599)
|-|.||++ -.|.||=.+|+.++..|...|.||-.|-.||.
T Consensus 93 kvI~vts~-kgG~GKTtva~nLA~~lA~~G~rVLLID~D~~ 132 (286)
T 3la6_A 93 NVLMMTGV-SPSIGMTFVCANLAAVISQTNKRVLLIDCDMR 132 (286)
T ss_dssp CEEEEEES-SSSSSHHHHHHHHHHHHHTTTCCEEEEECCTT
T ss_pred eEEEEECC-CCCCcHHHHHHHHHHHHHhCCCCEEEEeccCC
Confidence 66778765 46899999999999999999999999999985
No 132
>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*
Probab=61.32 E-value=5.8 Score=38.36 Aligned_cols=31 Identities=29% Similarity=0.326 Sum_probs=24.1
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 007533 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (599)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~ 37 (599)
||-++||||- +|||+.+ .+.|..+|++|...
T Consensus 1 Mk~vlVTGas-~gIG~~i-----a~~l~~~G~~V~~~ 31 (254)
T 1zmt_A 1 MSTAIVTNVK-HFGGMGS-----ALRLSEAGHTVACH 31 (254)
T ss_dssp -CEEEESSTT-STTHHHH-----HHHHHHTTCEEEEC
T ss_pred CeEEEEeCCC-chHHHHH-----HHHHHHCCCEEEEE
Confidence 7899999996 8999864 45677789988765
No 133
>1eiw_A Hypothetical protein MTH538; CHEY-like fold, flavodoxin-like fold, (A/B)5 doubly wound fold, parallel beta sheet; NMR {Methanothermobacterthermautotrophicus} SCOP: c.23.3.1
Probab=60.09 E-value=5.8 Score=34.90 Aligned_cols=39 Identities=21% Similarity=0.271 Sum_probs=33.4
Q ss_pred hccCCCEEEeCCCCCCCchhHHHHHHHHHHHcCCCEEEE
Q 007533 357 LLKGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGI 395 (599)
Q Consensus 357 ~L~~~DGIlVPGGfG~rg~eg~i~aik~are~~iP~LGI 395 (599)
.++.+|++++.-|.-+..-++...-|+.|.+.++|++||
T Consensus 35 ~I~~~~~vIvL~G~~t~~s~wv~~EI~~A~~~gkpIigV 73 (111)
T 1eiw_A 35 TPEDADAVIVLAGLWGTRRDEILGAVDLARKSSKPIITV 73 (111)
T ss_dssp CSSSCSEEEEEGGGTTTSHHHHHHHHHHHTTTTCCEEEE
T ss_pred ccccCCEEEEEeCCCcCCChHHHHHHHHHHHcCCCEEEE
Confidence 578999999988877766677777788999999999998
No 134
>2pbr_A DTMP kinase, thymidylate kinase; transferase, nucleotide biosynthesis, TMP-binding, A binding, structural genomics, NPPSFA; 1.96A {Aquifex aeolicus}
Probab=59.96 E-value=8.1 Score=34.93 Aligned_cols=34 Identities=26% Similarity=0.257 Sum_probs=28.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~ 37 (599)
+.|++||+ +|-||...|.-+...|...|+.|...
T Consensus 1 ~~I~l~G~--~GsGKsT~~~~L~~~l~~~g~~~i~~ 34 (195)
T 2pbr_A 1 MLIAFEGI--DGSGKTTQAKKLYEYLKQKGYFVSLY 34 (195)
T ss_dssp CEEEEECS--TTSCHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CEEEEECC--CCCCHHHHHHHHHHHHHHCCCeEEEE
Confidence 36899998 67799999999999998889877543
No 135
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=58.93 E-value=5.2 Score=39.97 Aligned_cols=36 Identities=25% Similarity=0.361 Sum_probs=26.9
Q ss_pred cCCCEEEeCCCCCCCchhHHHHHHHHHHHc--CCCEEEEehhH
Q 007533 359 KGADGILVPGGFGNRGVQGKILAAKYAREH--RIPYLGICLGM 399 (599)
Q Consensus 359 ~~~DGIlVPGGfG~rg~eg~i~aik~are~--~iP~LGICLGm 399 (599)
.++|.||+-||-|+ +..+++.+... ++|+|||=+|.
T Consensus 34 ~~~D~vv~lGGDGT-----~l~aa~~~~~~~~~~PilGIn~G~ 71 (272)
T 2i2c_A 34 VEPEIVISIGGDGT-----FLSAFHQYEERLDEIAFIGIHTGH 71 (272)
T ss_dssp SSCSEEEEEESHHH-----HHHHHHHTGGGTTTCEEEEEESSS
T ss_pred CCCCEEEEEcCcHH-----HHHHHHHHhhcCCCCCEEEEeCCC
Confidence 36799999997552 55677776665 89999997763
No 136
>1vma_A Cell division protein FTSY; TM0570, structural genomics, JCS protein structure initiative, PSI, joint center for structu genomics; HET: CIT; 1.60A {Thermotoga maritima} SCOP: a.24.13.1 c.37.1.10
Probab=58.68 E-value=13 Score=37.82 Aligned_cols=40 Identities=20% Similarity=0.326 Sum_probs=36.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccc
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYL 43 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~dpyl 43 (599)
+.|.++|- +|-||=.+++.|+.+|+..|.+|..+-.|+|-
T Consensus 105 ~vi~ivG~--~GsGKTTl~~~LA~~l~~~g~kV~lv~~D~~r 144 (306)
T 1vma_A 105 FVIMVVGV--NGTGKTTSCGKLAKMFVDEGKSVVLAAADTFR 144 (306)
T ss_dssp EEEEEECC--TTSSHHHHHHHHHHHHHHTTCCEEEEEECTTC
T ss_pred eEEEEEcC--CCChHHHHHHHHHHHHHhcCCEEEEEcccccc
Confidence 57888983 99999999999999999999999999999863
No 137
>3jy6_A Transcriptional regulator, LACI family; NYSGXRC, PSI-II, protein S initiative, structural genomics; 1.97A {Lactobacillus brevis}
Probab=58.00 E-value=41 Score=32.03 Aligned_cols=84 Identities=13% Similarity=0.099 Sum_probs=46.5
Q ss_pred CceEEEEEeecCCCcchHH-HHHHHHHHcCCcceeeeEEEEecCCCCCCccccCCchhhhHHHHh--ccCCCEEEeCCCC
Q 007533 294 EPVRIAMVGKYTGLSDAYL-SILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKL--LKGADGILVPGGF 370 (599)
Q Consensus 294 ~~v~IaiVGkY~~l~DaY~-SIi~AL~haG~~~~v~v~i~wi~s~~le~~~~~~~p~~y~~a~~~--L~~~DGIlVPGGf 370 (599)
++.+||++- ....+.|. .+++.++.+..+....+.+...+.+ ++.-....+. -.++||||+.+..
T Consensus 6 ~s~~Igvi~--~~~~~~~~~~~~~gi~~~~~~~g~~~~~~~~~~~----------~~~~~~~~~~l~~~~vdgiIi~~~~ 73 (276)
T 3jy6_A 6 SSKLIAVIV--ANIDDYFSTELFKGISSILESRGYIGVLFDANAD----------IEREKTLLRAIGSRGFDGLILQSFS 73 (276)
T ss_dssp CCCEEEEEE--SCTTSHHHHHHHHHHHHHHHTTTCEEEEEECTTC----------HHHHHHHHHHHHTTTCSEEEEESSC
T ss_pred CCcEEEEEe--CCCCchHHHHHHHHHHHHHHHCCCEEEEEeCCCC----------HHHHHHHHHHHHhCCCCEEEEecCC
Confidence 456899883 34444544 5666666655555444444332211 1111111122 2689999998743
Q ss_pred CCCchhHHHHHHHHHHHcCCCEEEEe
Q 007533 371 GNRGVQGKILAAKYAREHRIPYLGIC 396 (599)
Q Consensus 371 G~rg~eg~i~aik~are~~iP~LGIC 396 (599)
. ...++.+.+.++|+.-+.
T Consensus 74 ~-------~~~~~~l~~~~iPvV~i~ 92 (276)
T 3jy6_A 74 N-------PQTVQEILHQQMPVVSVD 92 (276)
T ss_dssp C-------HHHHHHHHTTSSCEEEES
T ss_pred c-------HHHHHHHHHCCCCEEEEe
Confidence 3 345667777899987553
No 138
>3l49_A ABC sugar (ribose) transporter, periplasmic substrate-binding subunit; sugar binding/transporter, structural genomics, PSI; HET: UNL; 2.30A {Rhodobacter sphaeroides}
Probab=57.71 E-value=43 Score=31.97 Aligned_cols=86 Identities=14% Similarity=0.088 Sum_probs=45.5
Q ss_pred CceEEEEEeecCCCcchHH-HHHHHHHHcCCcceeeeEEEEecCCCCCCccccCCchhhhHHHHh--ccCCCEEEeCCCC
Q 007533 294 EPVRIAMVGKYTGLSDAYL-SILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKL--LKGADGILVPGGF 370 (599)
Q Consensus 294 ~~v~IaiVGkY~~l~DaY~-SIi~AL~haG~~~~v~v~i~wi~s~~le~~~~~~~p~~y~~a~~~--L~~~DGIlVPGGf 370 (599)
++.+||++-. ...+.|. .+++.++.+..+....+.+ .++.. +++......+. -.++||||+.+..
T Consensus 4 ~~~~Ig~i~~--~~~~~~~~~~~~gi~~~a~~~g~~~~~--~~~~~--------~~~~~~~~~~~l~~~~vdgiIi~~~~ 71 (291)
T 3l49_A 4 EGKTIGITAI--GTDHDWDLKAYQAQIAEIERLGGTAIA--LDAGR--------NDQTQVSQIQTLIAQKPDAIIEQLGN 71 (291)
T ss_dssp TTCEEEEEES--CCSSHHHHHHHHHHHHHHHHTTCEEEE--EECTT--------CHHHHHHHHHHHHHHCCSEEEEESSC
T ss_pred CCcEEEEEeC--CCCChHHHHHHHHHHHHHHHcCCEEEE--EcCCC--------CHHHHHHHHHHHHHcCCCEEEEeCCC
Confidence 4568999843 3444553 4555555554444333333 33221 11111112222 2589999987642
Q ss_pred CCCchhHHHHHHHHHHHcCCCEEEE
Q 007533 371 GNRGVQGKILAAKYAREHRIPYLGI 395 (599)
Q Consensus 371 G~rg~eg~i~aik~are~~iP~LGI 395 (599)
. ......++.+.+.++|+.-+
T Consensus 72 ~----~~~~~~~~~~~~~~iPvV~~ 92 (291)
T 3l49_A 72 L----DVLNPWLQKINDAGIPLFTV 92 (291)
T ss_dssp H----HHHHHHHHHHHHTTCCEEEE
T ss_pred h----hhhHHHHHHHHHCCCcEEEe
Confidence 1 22345677788889998765
No 139
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=57.38 E-value=8.8 Score=38.37 Aligned_cols=89 Identities=22% Similarity=0.160 Sum_probs=49.3
Q ss_pred eEEEEEeecCC--CcchHHHHHHHHHHcCCcceeeeEEEEecCCCCCCccccCCchhhhHHHHhccCCCEEEeCCCCCCC
Q 007533 296 VRIAMVGKYTG--LSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNR 373 (599)
Q Consensus 296 v~IaiVGkY~~--l~DaY~SIi~AL~haG~~~~v~v~i~wi~s~~le~~~~~~~p~~y~~a~~~L~~~DGIlVPGGfG~r 373 (599)
.||+++.+..+ .......+.+.|+..|+++.+. ...++.+.... .+ .+. ......++|.||+-||-|+
T Consensus 6 kki~ii~np~~~~~~~~~~~i~~~l~~~g~~v~~~----~~~~~~~~~~~---~~-~~~-~~~~~~~~D~vi~~GGDGT- 75 (292)
T 2an1_A 6 KCIGIVGHPRHPTALTTHEMLYRWLCDQGYEVIVE----QQIAHELQLKN---VP-TGT-LAEIGQQADLAVVVGGDGN- 75 (292)
T ss_dssp CEEEEECC-------CHHHHHHHHHHHTTCEEEEE----HHHHHHTTCSS---CC-EEC-HHHHHHHCSEEEECSCHHH-
T ss_pred cEEEEEEcCCCHHHHHHHHHHHHHHHHCCCEEEEe----cchhhhccccc---cc-ccc-hhhcccCCCEEEEEcCcHH-
Confidence 36888866432 2234567889999998875331 00010110000 00 000 0112357899999998553
Q ss_pred chhHHHHHHHHHHHcCCCEEEEehh
Q 007533 374 GVQGKILAAKYAREHRIPYLGICLG 398 (599)
Q Consensus 374 g~eg~i~aik~are~~iP~LGICLG 398 (599)
+..+++...+.++|+|||=+|
T Consensus 76 ----~l~a~~~~~~~~~P~lGI~~G 96 (292)
T 2an1_A 76 ----MLGAARTLARYDINVIGINRG 96 (292)
T ss_dssp ----HHHHHHHHTTSSCEEEEBCSS
T ss_pred ----HHHHHHHhhcCCCCEEEEECC
Confidence 566777777778999999655
No 140
>2px0_A Flagellar biosynthesis protein FLHF; SRP GTPase, flagellum, protein transport, biosynthetic protein; HET: GNP; 3.00A {Bacillus subtilis} PDB: 2px3_A* 3syn_A*
Probab=57.19 E-value=11 Score=38.21 Aligned_cols=38 Identities=24% Similarity=0.477 Sum_probs=34.0
Q ss_pred EEEEeCCccCCcchHHHHHHHHHHHHH-CCCeeEEeeeccc
Q 007533 3 YVLVTGGVVSGLGKGVTASSIGVLLKA-CGLRVTCIKIDPY 42 (599)
Q Consensus 3 ~i~vtggv~s~~gkgi~~~s~g~ll~~-~g~~v~~~k~dpy 42 (599)
.|.++|- +|.||=.+++.|+.+|+. .|.+|..+-.|||
T Consensus 107 vi~lvG~--~GsGKTTl~~~LA~~l~~~~G~~V~lv~~D~~ 145 (296)
T 2px0_A 107 YIVLFGS--TGAGKTTTLAKLAAISMLEKHKKIAFITTDTY 145 (296)
T ss_dssp EEEEEES--TTSSHHHHHHHHHHHHHHTTCCCEEEEECCCS
T ss_pred EEEEECC--CCCCHHHHHHHHHHHHHHhcCCEEEEEecCcc
Confidence 5667764 799999999999999995 8999999999997
No 141
>3l6u_A ABC-type sugar transport system periplasmic compo; structural genomics, nysgrc, target 11006S, PSI-2, protein S initiative; 1.90A {Exiguobacterium sibiricum}
Probab=56.12 E-value=45 Score=31.84 Aligned_cols=86 Identities=9% Similarity=0.011 Sum_probs=43.4
Q ss_pred CceEEEEEeecCCCcchHH-HHHHHHHHcCCcceeeeEEEEecCCCCCCccccCCchhhhHHHHh--ccCCCEEEeCCCC
Q 007533 294 EPVRIAMVGKYTGLSDAYL-SILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKL--LKGADGILVPGGF 370 (599)
Q Consensus 294 ~~v~IaiVGkY~~l~DaY~-SIi~AL~haG~~~~v~v~i~wi~s~~le~~~~~~~p~~y~~a~~~--L~~~DGIlVPGGf 370 (599)
++.+||++-. ...+.|. .+++.++.+..+....+.+. ++.. +++.-....+. -.++||||+.+..
T Consensus 7 ~~~~Ig~i~~--~~~~~~~~~~~~gi~~~a~~~g~~~~~~--~~~~--------~~~~~~~~~~~l~~~~vdgiI~~~~~ 74 (293)
T 3l6u_A 7 KRNIVGFTIV--NDKHEFAQRLINAFKAEAKANKYEALVA--TSQN--------SRISEREQILEFVHLKVDAIFITTLD 74 (293)
T ss_dssp --CEEEEEES--CSCSHHHHHHHHHHHHHHHHTTCEEEEE--ECSS--------CHHHHHHHHHHHHHTTCSEEEEECSC
T ss_pred CCcEEEEEEe--cCCcHHHHHHHHHHHHHHHHcCCEEEEE--CCCC--------CHHHHHHHHHHHHHcCCCEEEEecCC
Confidence 4568999843 3444443 45555555444443333332 2221 11111112222 2589999997643
Q ss_pred CCCchhHHHHHHHHHHHcCCCEEEE
Q 007533 371 GNRGVQGKILAAKYAREHRIPYLGI 395 (599)
Q Consensus 371 G~rg~eg~i~aik~are~~iP~LGI 395 (599)
.+ . ....++.+.+.++|+.-+
T Consensus 75 ~~-~---~~~~~~~~~~~~iPvV~~ 95 (293)
T 3l6u_A 75 DV-Y---IGSAIEEAKKAGIPVFAI 95 (293)
T ss_dssp TT-T---THHHHHHHHHTTCCEEEE
T ss_pred hH-H---HHHHHHHHHHcCCCEEEe
Confidence 22 1 224566777889998765
No 142
>1rz3_A Hypothetical protein rbstp0775; MCSG, structural genomics, PSI, protein structure initiative; 1.90A {Geobacillus stearothermophilus} SCOP: c.37.1.6
Probab=55.96 E-value=14 Score=34.46 Aligned_cols=40 Identities=23% Similarity=0.293 Sum_probs=35.0
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccc
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYL 43 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~dpyl 43 (599)
..|.|+|+ ||-||-.++..|..+|+..|.+|...-.|.+.
T Consensus 23 ~~i~i~G~--~GsGKstl~~~l~~~~~~~~~~v~~~~~d~~~ 62 (201)
T 1rz3_A 23 LVLGIDGL--SRSGKTTLANQLSQTLREQGISVCVFHMDDHI 62 (201)
T ss_dssp EEEEEEEC--TTSSHHHHHHHHHHHHHHTTCCEEEEEGGGGC
T ss_pred eEEEEECC--CCCCHHHHHHHHHHHHhhcCCeEEEeccCccc
Confidence 56888997 88899999999999999999999888888764
No 143
>3ez2_A Plasmid partition protein A; type IA, DNA binding, winged-HTH, DNA bindin; HET: ADP EPE; 2.05A {Escherichia coli} PDB: 3ez6_A* 3ez7_A
Probab=55.28 E-value=14 Score=38.31 Aligned_cols=43 Identities=23% Similarity=0.392 Sum_probs=36.0
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHH------CCCeeEEeeeccccc
Q 007533 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKA------CGLRVTCIKIDPYLN 44 (599)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~~s~g~ll~~------~g~~v~~~k~dpyln 44 (599)
+|-|.|++|- -|.||=.+|+.++..|.. +|+||-.+-+||.-|
T Consensus 108 ~~vIav~s~K-GGvGKTT~a~nLA~~La~~~~~~~~g~rVlliD~D~q~~ 156 (398)
T 3ez2_A 108 AYVIFISNLK-GGVSKTVSTVSLAHAMRAHPHLLMEDLRILVIDLDPQSS 156 (398)
T ss_dssp CEEEEECCSS-SSSSHHHHHHHHHHHHHHCTTTGGGCCCEEEEEECTTCH
T ss_pred CeEEEEEeCC-CCccHHHHHHHHHHHHHhcchhhcCCCeEEEEeCCCCCC
Confidence 4667777554 789999999999999984 799999999999654
No 144
>3gbv_A Putative LACI-family transcriptional regulator; NYSGXRC, PSI-II, 11231J, structur genomics, protein structure initiative; 2.20A {Bacteroides fragilis}
Probab=55.24 E-value=52 Score=31.43 Aligned_cols=90 Identities=12% Similarity=0.077 Sum_probs=47.9
Q ss_pred CceEEEEEeecCCC-cch-HHHHHHHHHHcCCcc-eeeeEEEEecCCCCCCccccCCchhhhHHHHh--ccCCCEEEeCC
Q 007533 294 EPVRIAMVGKYTGL-SDA-YLSILKALLHASVDL-RKKLVIDWIPACDLEDATEKENPDAYKAAWKL--LKGADGILVPG 368 (599)
Q Consensus 294 ~~v~IaiVGkY~~l-~Da-Y~SIi~AL~haG~~~-~v~v~i~wi~s~~le~~~~~~~p~~y~~a~~~--L~~~DGIlVPG 368 (599)
++.+||++-. .. .+. |..+++.++.+..+. ...+.+.+.....- +++...+..+. -.++||||+.+
T Consensus 7 ~~~~Igvi~~--~~~~~~~~~~~~~gi~~~a~~~~g~~~~~~~~~~~~~-------~~~~~~~~i~~l~~~~vdgiii~~ 77 (304)
T 3gbv_A 7 KKYTFACLLP--KHLEGEYWTDVQKGIREAVTTYSDFNISANITHYDPY-------DYNSFVATSQAVIEEQPDGVMFAP 77 (304)
T ss_dssp CCEEEEEEEE--CCCTTSHHHHHHHHHHHHHHHTGGGCEEEEEEEECSS-------CHHHHHHHHHHHHTTCCSEEEECC
T ss_pred CcceEEEEec--CCCCchHHHHHHHHHHHHHHHHHhCCeEEEEEcCCCC-------CHHHHHHHHHHHHhcCCCEEEECC
Confidence 4678998733 22 334 445666666655444 33444555432211 12222222222 26899999987
Q ss_pred CCCCCchhHHHHHHHHHHHcCCCEEEEe
Q 007533 369 GFGNRGVQGKILAAKYAREHRIPYLGIC 396 (599)
Q Consensus 369 GfG~rg~eg~i~aik~are~~iP~LGIC 396 (599)
...+ .....++.+.+.++|+.-+.
T Consensus 78 ~~~~----~~~~~~~~~~~~~iPvV~~~ 101 (304)
T 3gbv_A 78 TVPQ----YTKGFTDALNELGIPYIYID 101 (304)
T ss_dssp SSGG----GTHHHHHHHHHHTCCEEEES
T ss_pred CChH----HHHHHHHHHHHCCCeEEEEe
Confidence 4221 22345666777899986553
No 145
>3gv0_A Transcriptional regulator, LACI family; transcription regulator, PSI-II, structural genomics structure initiative; 2.35A {Agrobacterium tumefaciens str}
Probab=54.64 E-value=32 Score=33.08 Aligned_cols=86 Identities=14% Similarity=0.127 Sum_probs=45.1
Q ss_pred CceEEEEEeecCCC-cchHHHHHHHHHHcCCcceeeeEEEEecCCCCCCccccCCchhhhHHHHhc--cCCCEEEeCCCC
Q 007533 294 EPVRIAMVGKYTGL-SDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLL--KGADGILVPGGF 370 (599)
Q Consensus 294 ~~v~IaiVGkY~~l-~DaY~SIi~AL~haG~~~~v~v~i~wi~s~~le~~~~~~~p~~y~~a~~~L--~~~DGIlVPGGf 370 (599)
++.+||++=..... ..-|..+++.++.+..+....+.+...+.+ .+ .-....+.+ .++||||+.+..
T Consensus 7 ~s~~Igvv~~~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~-~~---------~~~~~~~~l~~~~vdgiIi~~~~ 76 (288)
T 3gv0_A 7 KTNVIALVLSVDEELMGFTSQMVFGITEVLSTTQYHLVVTPHIHA-KD---------SMVPIRYILETGSADGVIISKIE 76 (288)
T ss_dssp CCCEEEEECBCCCCSSCHHHHHHHHHHHHHTTSSCEEEECCBSSG-GG---------TTHHHHHHHHHTCCSEEEEESCC
T ss_pred CCCEEEEEecCCccccHHHHHHHHHHHHHHHHcCCEEEEecCCcc-hh---------HHHHHHHHHHcCCccEEEEecCC
Confidence 45689988432211 123556777777766555554433322211 00 001122222 689999998633
Q ss_pred CCCchhHHHHHHHHHHHcCCCEEEE
Q 007533 371 GNRGVQGKILAAKYAREHRIPYLGI 395 (599)
Q Consensus 371 G~rg~eg~i~aik~are~~iP~LGI 395 (599)
... ..++.+.+.++|+.-+
T Consensus 77 ~~~------~~~~~l~~~~iPvV~i 95 (288)
T 3gv0_A 77 PND------PRVRFMTERNMPFVTH 95 (288)
T ss_dssp TTC------HHHHHHHHTTCCEEEE
T ss_pred CCc------HHHHHHhhCCCCEEEE
Confidence 221 3456667788998654
No 146
>3k4h_A Putative transcriptional regulator; structural genomics, protein structure INI NEW YORK structural genomix research consortium; HET: MAL; 2.80A {Bacillus cytotoxicus nvh 391-98}
Probab=54.60 E-value=35 Score=32.65 Aligned_cols=31 Identities=23% Similarity=0.376 Sum_probs=21.5
Q ss_pred cCCCEEEeCCCCCCCchhHHHHHHHHHHHcCCCEEEE
Q 007533 359 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGI 395 (599)
Q Consensus 359 ~~~DGIlVPGGfG~rg~eg~i~aik~are~~iP~LGI 395 (599)
.++||||+.+..... ..++.+.+.++|+.-+
T Consensus 68 ~~vdgiIi~~~~~~~------~~~~~l~~~~iPvV~~ 98 (292)
T 3k4h_A 68 RQIGGIILLYSREND------RIIQYLHEQNFPFVLI 98 (292)
T ss_dssp TCCCEEEESCCBTTC------HHHHHHHHTTCCEEEE
T ss_pred CCCCEEEEeCCCCCh------HHHHHHHHCCCCEEEE
Confidence 689999998743221 3566677789998654
No 147
>3a4m_A L-seryl-tRNA(SEC) kinase; P-loop motif, walker A motif, ATP binding motif, ATP- binding, nucleotide-binding, transferase; HET: ADP; 1.79A {Methanocaldococcus jannaschii} PDB: 3a4l_A* 3a4n_A 3am1_A* 3add_A* 3adc_A* 3adb_A*
Probab=54.26 E-value=11 Score=36.83 Aligned_cols=39 Identities=21% Similarity=0.400 Sum_probs=31.8
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 007533 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (599)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~dp 41 (599)
|+.|+++|. +|-||...|..|...|...|+.+..+-.|.
T Consensus 4 ~~lIvl~G~--pGSGKSTla~~La~~L~~~g~~~i~~~~D~ 42 (260)
T 3a4m_A 4 IMLIILTGL--PGVGKSTFSKNLAKILSKNNIDVIVLGSDL 42 (260)
T ss_dssp CEEEEEECC--TTSSHHHHHHHHHHHHHHTTCCEEEECTHH
T ss_pred CEEEEEEcC--CCCCHHHHHHHHHHHHHhCCCEEEEECchH
Confidence 578999997 899999999999999998998775433343
No 148
>8abp_A L-arabinose-binding protein; binding proteins; HET: GLA GAL; 1.49A {Escherichia coli} SCOP: c.93.1.1 PDB: 7abp_A* 6abp_A* 1abe_A* 1abf_A* 5abp_A* 1bap_A* 1apb_A* 9abp_A* 2wrz_A
Probab=54.01 E-value=45 Score=32.09 Aligned_cols=84 Identities=15% Similarity=0.074 Sum_probs=46.2
Q ss_pred ceEEEEEeecCCCcchHH-HHHHHHHHcCCcceeeeEEEEecCCCCCCccccCCchhhhHHHHh--ccCCCEEEeCCCCC
Q 007533 295 PVRIAMVGKYTGLSDAYL-SILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKL--LKGADGILVPGGFG 371 (599)
Q Consensus 295 ~v~IaiVGkY~~l~DaY~-SIi~AL~haG~~~~v~v~i~wi~s~~le~~~~~~~p~~y~~a~~~--L~~~DGIlVPGGfG 371 (599)
+++||++- ....+.|. .+.+.++.+..+....+ .+.++.+.+ ......+. -.++||||+.+...
T Consensus 2 ~~~Ig~i~--~~~~~~~~~~~~~gi~~~a~~~g~~~--~~~~~~~~~---------~~~~~i~~l~~~~vdgiii~~~~~ 68 (306)
T 8abp_A 2 NLKLGFLV--KQPEEPWFQTEWKFADKAGKDLGFEV--IKIAVPDGE---------KTLNAIDSLAASGAKGFVICTPDP 68 (306)
T ss_dssp CEEEEEEE--SCTTSHHHHHHHHHHHHHHHHHTEEE--EEEECCSHH---------HHHHHHHHHHHTTCCEEEEECSCG
T ss_pred CeEEEEEe--CCCCchHHHHHHHHHHHHHHHcCCEE--EEeCCCCHH---------HHHHHHHHHHHcCCCEEEEeCCCc
Confidence 47899984 34445544 56666665544444433 334443221 11112222 25799999987321
Q ss_pred CCchhHHHHHHHHHHHcCCCEEEE
Q 007533 372 NRGVQGKILAAKYAREHRIPYLGI 395 (599)
Q Consensus 372 ~rg~eg~i~aik~are~~iP~LGI 395 (599)
......++.+.+.++|+.-+
T Consensus 69 ----~~~~~~~~~~~~~~iPvV~~ 88 (306)
T 8abp_A 69 ----KLGSAIVAKARGYDMKVIAV 88 (306)
T ss_dssp ----GGHHHHHHHHHHTTCEEEEE
T ss_pred ----hhhHHHHHHHHHCCCcEEEe
Confidence 22345577788889998644
No 149
>1nn5_A Similar to deoxythymidylate kinase (thymidylate K; P-loop, D4TMP, transferase; HET: 2DT ANP; 1.50A {Homo sapiens} SCOP: c.37.1.1 PDB: 1e2e_A* 1e2d_A* 1e2g_A* 1e2q_A* 1e99_A* 1e9a_A* 1e9b_A* 1nmx_A* 1nmz_A* 1nn0_A* 1nn1_A* 1e2f_A* 1nn3_A* 2xx3_A* 1e9c_A* 1e9d_A* 1e9e_A* 1e98_A* 1nmy_A* 1e9f_A*
Probab=53.86 E-value=14 Score=34.15 Aligned_cols=34 Identities=21% Similarity=0.298 Sum_probs=29.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~ 37 (599)
+.|++||+ +|-||...|.-|...|...|++|...
T Consensus 10 ~~I~l~G~--~GsGKsT~~~~L~~~l~~~~~~v~~~ 43 (215)
T 1nn5_A 10 ALIVLEGV--DRAGKSTQSRKLVEALCAAGHRAELL 43 (215)
T ss_dssp CEEEEEES--TTSSHHHHHHHHHHHHHHTTCCEEEE
T ss_pred cEEEEECC--CCCCHHHHHHHHHHHHHHcCCcEEEe
Confidence 47999996 78899999999999999999998543
No 150
>1j8m_F SRP54, signal recognition 54 kDa protein; signaling protein; 2.00A {Acidianus ambivalens} SCOP: a.24.13.1 c.37.1.10 PDB: 1j8y_F
Probab=53.37 E-value=16 Score=36.99 Aligned_cols=40 Identities=30% Similarity=0.502 Sum_probs=35.8
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccc
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYL 43 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~dpyl 43 (599)
+.|.++| .+|.||=.+++.++.+|...|.+|..+-.|||-
T Consensus 99 ~vi~i~G--~~G~GKTT~~~~la~~~~~~g~~v~l~~~D~~r 138 (297)
T 1j8m_F 99 YVIMLVG--VQGTGKTTTAGKLAYFYKKKGFKVGLVGADVYR 138 (297)
T ss_dssp EEEEEEC--SSCSSTTHHHHHHHHHHHHTTCCEEEEECCCSS
T ss_pred eEEEEEC--CCCCCHHHHHHHHHHHHHHCCCeEEEEecCCCC
Confidence 4677775 499999999999999999999999999999974
No 151
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=52.72 E-value=9.4 Score=36.10 Aligned_cols=33 Identities=27% Similarity=0.387 Sum_probs=24.7
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 007533 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (599)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~ 39 (599)
||.++||||- +|||+. +.+.|..+|++|...-.
T Consensus 2 ~k~vlITGas-~gIG~~-----ia~~l~~~G~~V~~~~r 34 (235)
T 3l77_A 2 MKVAVITGAS-RGIGEA-----IARALARDGYALALGAR 34 (235)
T ss_dssp CCEEEEESCS-SHHHHH-----HHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCC-cHHHHH-----HHHHHHHCCCEEEEEeC
Confidence 6889999985 777774 45667778998876543
No 152
>2rgy_A Transcriptional regulator, LACI family; 11011J, NYSGXRC, transctiptional regulator, SUG binding protein, structural genomics, PSI-2; 2.05A {Burkholderia phymatum}
Probab=51.82 E-value=57 Score=31.32 Aligned_cols=32 Identities=9% Similarity=-0.005 Sum_probs=21.6
Q ss_pred cCCCEEEeCCCCCCCchhHHHHHHHHHHHcCCCEEEEe
Q 007533 359 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGIC 396 (599)
Q Consensus 359 ~~~DGIlVPGGfG~rg~eg~i~aik~are~~iP~LGIC 396 (599)
.++||||+.+...+ . ..++.+.+.++|+.-+.
T Consensus 66 ~~vdgiIi~~~~~~---~---~~~~~l~~~~iPvV~~~ 97 (290)
T 2rgy_A 66 RDCDGVVVISHDLH---D---EDLDELHRMHPKMVFLN 97 (290)
T ss_dssp TTCSEEEECCSSSC---H---HHHHHHHHHCSSEEEES
T ss_pred cCccEEEEecCCCC---H---HHHHHHhhcCCCEEEEc
Confidence 58999999874332 1 34555666799987664
No 153
>3cs3_A Sugar-binding transcriptional regulator, LACI FAM; structural genomics, sugar-binding transcriptional regulator structure initiative; 2.40A {Enterococcus faecalis}
Probab=51.48 E-value=34 Score=32.70 Aligned_cols=79 Identities=8% Similarity=-0.067 Sum_probs=40.6
Q ss_pred CceEEEEEeecCCCcch-HHHHHHHHHHcCCcceeeeEEEEecCCCCCCccccCCchhhhHHHHhccCCCEEEeCCCCCC
Q 007533 294 EPVRIAMVGKYTGLSDA-YLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGN 372 (599)
Q Consensus 294 ~~v~IaiVGkY~~l~Da-Y~SIi~AL~haG~~~~v~v~i~wi~s~~le~~~~~~~p~~y~~a~~~L~~~DGIlVPGGfG~ 372 (599)
++.+||++-. ...+. |..+++.++.+..+....+.+...+. +.+.+ ..+ ++||||+.+...+
T Consensus 7 ~~~~Igvi~~--~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~-~~~~~-------------~~~-~vdgiI~~~~~~~ 69 (277)
T 3cs3_A 7 QTNIIGVYLA--DYGGSFYGELLEGIKKGLALFDYEMIVCSGKK-SHLFI-------------PEK-MVDGAIILDWTFP 69 (277)
T ss_dssp CCCEEEEEEC--SSCTTTHHHHHHHHHHHHHTTTCEEEEEESTT-TTTCC-------------CTT-TCSEEEEECTTSC
T ss_pred CCcEEEEEec--CCCChhHHHHHHHHHHHHHHCCCeEEEEeCCC-CHHHH-------------hhc-cccEEEEecCCCC
Confidence 4568998842 23333 44566655554444333333322221 11110 112 8999999874221
Q ss_pred CchhHHHHHHHHHHHcCCCEEEE
Q 007533 373 RGVQGKILAAKYAREHRIPYLGI 395 (599)
Q Consensus 373 rg~eg~i~aik~are~~iP~LGI 395 (599)
. ..++.+.+.++|+.-+
T Consensus 70 ---~---~~~~~l~~~~iPvV~~ 86 (277)
T 3cs3_A 70 ---T---KEIEKFAERGHSIVVL 86 (277)
T ss_dssp ---H---HHHHHHHHTTCEEEES
T ss_pred ---H---HHHHHHHhcCCCEEEE
Confidence 1 3455666778887654
No 154
>4edh_A DTMP kinase, thymidylate kinase; structural genomics, PSI-biology; HET: TMP ADP; 1.32A {Pseudomonas aeruginosa PAO1} PDB: 4e5u_A* 4esh_A* 4gmd_A* 3uwk_A* 3uwo_A* 3uxm_A*
Probab=51.30 E-value=17 Score=34.85 Aligned_cols=35 Identities=23% Similarity=0.416 Sum_probs=31.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k 38 (599)
++|++.|. +|-||+..+.-|...|+.+|++|...+
T Consensus 7 ~~i~~eG~--~gsGKsT~~~~l~~~l~~~~~~v~~~~ 41 (213)
T 4edh_A 7 LFVTLEGP--EGAGKSTNRDYLAERLRERGIEVQLTR 41 (213)
T ss_dssp EEEEEECS--TTSSHHHHHHHHHHHHHTTTCCEEEEE
T ss_pred eEEEEEcC--CCCCHHHHHHHHHHHHHHcCCCccccc
Confidence 68999984 799999999999999999999997654
No 155
>3ez9_A Para; DNA binding, winged-HTH, partition, biosynthetic protein; 2.80A {Salmonella enterica subsp} PDB: 3ezf_A
Probab=51.21 E-value=12 Score=39.03 Aligned_cols=45 Identities=22% Similarity=0.365 Sum_probs=30.5
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHH------HCCCeeEEeeecccccCC
Q 007533 1 MKYVLVTGGVVSGLGKGVTASSIGVLLK------ACGLRVTCIKIDPYLNTD 46 (599)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~~s~g~ll~------~~g~~v~~~k~dpyln~d 46 (599)
+|-|.|++| --|.||=.+|+.++..|. .+|+||-.+-+||.-|..
T Consensus 111 ~~vIav~s~-KGGvGKTT~a~nLA~~LA~~g~~~~~g~rVlliD~D~~~~l~ 161 (403)
T 3ez9_A 111 PYVIFVVNL-KGGVSKTVSTVTLAHALRVHQDLLRHDLRILVIDLDPQASST 161 (403)
T ss_dssp CEEEEECCC---------CHHHHHHHHHSCGGGGGGCCCEEEEEESSSSGGG
T ss_pred ceEEEEEcC-CCCchHHHHHHHHHHHHHhcchhhcCCCeEEEEeCCCCCChh
Confidence 466777654 367899999999999998 689999999999976644
No 156
>3igf_A ALL4481 protein; two-domained protein consisting of the N-terminal alpha-beta the C-terminal all beta domain., structural genomics; 2.00A {Nostoc SP}
Probab=51.03 E-value=13 Score=39.01 Aligned_cols=39 Identities=23% Similarity=0.219 Sum_probs=33.6
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccc
Q 007533 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPY 42 (599)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~dpy 42 (599)
|+++|++| -.|.||=.+|++++..|..+|.||-.+-. |-
T Consensus 2 ~~i~~~~g--kGG~GKTt~a~~la~~la~~g~~vllvd~-~~ 40 (374)
T 3igf_A 2 ALILTFLG--KSGVARTKIAIAAAKLLASQGKRVLLAGL-AE 40 (374)
T ss_dssp CEEEEEEC--SBHHHHHHHHHHHHHHHHHTTCCEEEEEC-SC
T ss_pred cEEEEEeC--CCCCcHHHHHHHHHHHHHHCCCCeEEEeC-CC
Confidence 46777776 45999999999999999999999999987 63
No 157
>4f2g_A Otcase 1, ornithine carbamoyltransferase 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=51.00 E-value=65 Score=33.04 Aligned_cols=131 Identities=15% Similarity=0.178 Sum_probs=76.9
Q ss_pred ccCCchhhhhhhhcCCCcccEEEEecCCCCChhhhhccccCCCCCCCCeeeeCCCCCccchhHHHHHHHHHHHHHcCCCC
Q 007533 193 KTKPTQHSVRGLRGQGLTPNILACRSTVALDDNVKGKLSQFCHVPEQNIITLYDVPNIWHIPLLLRKAHEAIFKVLNLQG 272 (599)
Q Consensus 193 ktkptq~sv~~Lrs~Gi~pd~iv~R~~~~l~~~~~~Kislfc~v~~~~Vi~~~dv~tiy~vPl~L~g~~~~i~~~l~l~~ 272 (599)
|--+..-+++-|.+. .|+|++|... ...-+.+|-++.|| ||+.- ...+|=...|--++ -|.++++
T Consensus 86 kgEsl~DTarvls~~---~D~iviR~~~---~~~~~~lA~~~~vP---VINag--~~~~HPtQaLaDl~-Ti~e~~g--- 150 (309)
T 4f2g_A 86 RGEPVEDSAQVISRM---VDIIMIRTFE---QDIIQRFAENSRVP---VINGL--TNEYHPCQVLADIF-TYYEHRG--- 150 (309)
T ss_dssp BEECHHHHHHHHHHH---CSEEEEECSC---HHHHHHHHHTCSSC---EEEEE--CSSCCHHHHHHHHH-HHHHHHS---
T ss_pred CCCCHHHHHHHHHHh---CCEEEEecCC---HHHHHHHHHhCCCC---EEECC--CCccCcHHHHHHHH-HHHHHhC---
Confidence 444677778878766 7999999875 45666777778776 88885 35554433331111 1111111
Q ss_pred CCCchhhHHHHHHHhhhcCCCCceEEEEEeecCCCcchHHHHHHHHHHcCCcceeeeEEEEecCCCCCCccc--c----C
Q 007533 273 TTKEPLLKEWTSRAEICDGLHEPVRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATE--K----E 346 (599)
Q Consensus 273 ~~~~~~l~~W~~l~~~~~~~~~~v~IaiVGkY~~l~DaY~SIi~AL~haG~~~~v~v~i~wi~s~~le~~~~--~----~ 346 (599)
.-+.+|||+||+. ...-.|.+.++...|+++.+ +.++.++.... . .
T Consensus 151 -------------------~l~glkva~vGD~---~~va~Sl~~~~~~~G~~v~~------~~P~~~~~~~~~~~~~~g~ 202 (309)
T 4f2g_A 151 -------------------PIRGKTVAWVGDA---NNMLYTWIQAARILDFKLQL------STPPGYALDAKLVDAESAP 202 (309)
T ss_dssp -------------------CCTTCEEEEESCC---CHHHHHHHHHHHHHTCEEEE------ECCGGGCCCGGGSCGGGGG
T ss_pred -------------------CCCCCEEEEECCC---cchHHHHHHHHHHcCCEEEE------ECCcccCCCHHHHHHHcCC
Confidence 1246799999984 23567899999998987654 33333322110 0 0
Q ss_pred CchhhhHHHHhccCCCEEEe
Q 007533 347 NPDAYKAAWKLLKGADGILV 366 (599)
Q Consensus 347 ~p~~y~~a~~~L~~~DGIlV 366 (599)
.-..++...+.++++|-|..
T Consensus 203 ~v~~~~d~~eav~~aDvvyt 222 (309)
T 4f2g_A 203 FYQVFDDPNEACKGADLVTT 222 (309)
T ss_dssp GEEECSSHHHHTTTCSEEEE
T ss_pred eEEEEcCHHHHhcCCCEEEe
Confidence 00112334456888998776
No 158
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=50.88 E-value=13 Score=32.82 Aligned_cols=38 Identities=13% Similarity=0.057 Sum_probs=30.6
Q ss_pred cCCCEEEeCCCCCCCchhHHHHHHHHHHHcCCCEEEEehhHHHH
Q 007533 359 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGICLGMQVA 402 (599)
Q Consensus 359 ~~~DGIlVPGGfG~rg~eg~i~aik~are~~iP~LGICLGmQll 402 (599)
.++.+|++..||-+ -++++.|+++++.++|=|+|+++-
T Consensus 81 ~g~k~v~~~~G~~~------~e~~~~a~~~Girvv~nC~gv~l~ 118 (122)
T 3ff4_A 81 LKPKRVIFNPGTEN------EELEEILSENGIEPVIGCTLVMLS 118 (122)
T ss_dssp HCCSEEEECTTCCC------HHHHHHHHHTTCEEEESCHHHHHH
T ss_pred cCCCEEEECCCCCh------HHHHHHHHHcCCeEECCcCeEEec
Confidence 35667888888743 367788999999999999999875
No 159
>3rot_A ABC sugar transporter, periplasmic sugar binding; nysgrc, PSI-biology, structural genomics; 1.91A {Legionella pneumophila subsp}
Probab=50.11 E-value=63 Score=31.14 Aligned_cols=87 Identities=14% Similarity=0.158 Sum_probs=45.4
Q ss_pred ceEEEEEeecCCCcchHH-HHHHHHHHcCCcceeeeEEEEecCCCCCCccccCCchhhhHHHHh--ccCCCEEEeCCCCC
Q 007533 295 PVRIAMVGKYTGLSDAYL-SILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKL--LKGADGILVPGGFG 371 (599)
Q Consensus 295 ~v~IaiVGkY~~l~DaY~-SIi~AL~haG~~~~v~v~i~wi~s~~le~~~~~~~p~~y~~a~~~--L~~~DGIlVPGGfG 371 (599)
+.+||++-. ...+.|. .+.+.++.+..+....+ .+..+.... +++.-.+..+. -.++||||+.+...
T Consensus 3 ~~~Igvi~~--~~~~~~~~~~~~gi~~~a~~~g~~~--~~~~~~~~~------~~~~~~~~i~~l~~~~vdgiii~~~~~ 72 (297)
T 3rot_A 3 RDKYYLITH--GSQDPYWTSLFQGAKKAAEELKVDL--QILAPPGAN------DVPKQVQFIESALATYPSGIATTIPSD 72 (297)
T ss_dssp CCEEEEECS--CCCSHHHHHHHHHHHHHHHHHTCEE--EEECCSSSC------CHHHHHHHHHHHHHTCCSEEEECCCCS
T ss_pred eEEEEEEec--CCCCchHHHHHHHHHHHHHHhCcEE--EEECCCCcC------CHHHHHHHHHHHHHcCCCEEEEeCCCH
Confidence 468999843 3334444 56665555544443332 234432110 11222222222 26899999976432
Q ss_pred CCchhHHHHHHHHHHHcCCCEEEE
Q 007533 372 NRGVQGKILAAKYAREHRIPYLGI 395 (599)
Q Consensus 372 ~rg~eg~i~aik~are~~iP~LGI 395 (599)
+ .. ...++.+++.++|+.-+
T Consensus 73 ~-~~---~~~~~~~~~~giPvV~~ 92 (297)
T 3rot_A 73 T-AF---SKSLQRANKLNIPVIAV 92 (297)
T ss_dssp S-TT---HHHHHHHHHHTCCEEEE
T ss_pred H-HH---HHHHHHHHHCCCCEEEE
Confidence 2 22 34567777889998654
No 160
>2ef0_A Ornithine carbamoyltransferase; TTHA1199, thermus thermophil structural genomics, NPPSFA; 2.00A {Thermus thermophilus}
Probab=50.08 E-value=87 Score=31.97 Aligned_cols=157 Identities=17% Similarity=0.167 Sum_probs=89.1
Q ss_pred hHHHHHHHhhhHcCCCCEEEEeeeeeeeecCCCccccCCchhhhhhhhcCCCcccEEEEecCCCCChhhhhccccCCCCC
Q 007533 158 PFIEALGQFSYRVGPGNFCLIHVSLVPVLNVVGEQKTKPTQHSVRGLRGQGLTPNILACRSTVALDDNVKGKLSQFCHVP 237 (599)
Q Consensus 158 pf~ea~rq~~~~~g~~n~~~ihv~~vp~~~~~~e~ktkptq~sv~~Lrs~Gi~pd~iv~R~~~~l~~~~~~Kislfc~v~ 237 (599)
-|--|++|| | .++.++-. +.+.=.|--+...+++-|.+. .|+|++|... ...-+.+|-++.+|
T Consensus 62 SFe~A~~~L----G-g~~i~l~~------~~ss~~kgEsl~DTarvls~~---~D~iviR~~~---~~~~~~la~~~~vP 124 (301)
T 2ef0_A 62 TLEVAMVHL----G-GHAVYLDQ------KQVGIGEREPVRDVAKNLERF---VEGIAARVFR---HETVEALARHAKVP 124 (301)
T ss_dssp HHHHHHHHT----T-CEEEEEEG------GGSCTTTCCCHHHHHHHHTTT---CSEEEEECSS---HHHHHHHHHHCSSC
T ss_pred HHHHHHHHc----C-CeEEEECC------cccccCCCCchHHHHHHHHHh---CCEEEEecCC---hHHHHHHHHHCCCC
Confidence 466677665 4 33444321 122223555788888888766 5999999864 55666677777665
Q ss_pred CCCeeeeCCCCCccchhHHHHHHHHHHHHHcCCCCCCCchhhHHHHHHHhhhcCCCCceEEEEEeecCCCcchHHHHHHH
Q 007533 238 EQNIITLYDVPNIWHIPLLLRKAHEAIFKVLNLQGTTKEPLLKEWTSRAEICDGLHEPVRIAMVGKYTGLSDAYLSILKA 317 (599)
Q Consensus 238 ~~~Vi~~~dv~tiy~vPl~L~g~~~~i~~~l~l~~~~~~~~l~~W~~l~~~~~~~~~~v~IaiVGkY~~l~DaY~SIi~A 317 (599)
||+.-| ..+|=...|--++ -|.+++ . .-+.++|++||+. ...-.|.+.+
T Consensus 125 ---VINa~~--~~~HPtQaLaDl~-Ti~e~~---------------------g-~l~gl~ia~vGD~---~rva~Sl~~~ 173 (301)
T 2ef0_A 125 ---VVNALS--DRAHPLQALADLL-TLKEVF---------------------G-GLAGLEVAWVGDG---NNVLNSLLEV 173 (301)
T ss_dssp ---EEEEEC--SSCCHHHHHHHHH-HHHHHH---------------------S-CCTTCEEEEESCC---CHHHHHHHHH
T ss_pred ---EEeCCC--CccCchHHHHHHH-HHHHHh---------------------C-CcCCcEEEEECCC---chhHHHHHHH
Confidence 787654 5555443331111 001111 1 1246899999985 3356799999
Q ss_pred HHHcCCcceeeeEEEEecCCCCCCcccc-C--CchhhhHHHHhccCCCEEEeCC
Q 007533 318 LLHASVDLRKKLVIDWIPACDLEDATEK-E--NPDAYKAAWKLLKGADGILVPG 368 (599)
Q Consensus 318 L~haG~~~~v~v~i~wi~s~~le~~~~~-~--~p~~y~~a~~~L~~~DGIlVPG 368 (599)
|...|+++.+ +.++.++..... + .-..++...+.++++|-|...-
T Consensus 174 ~~~~g~~v~~------~~P~~~~~~~~~~~~~~~~~~~d~~eav~~aDvvy~~~ 221 (301)
T 2ef0_A 174 APLAGLKVRV------ATPKGYEPDPGLLKRANAFFTHDPKEAALGAHALYTDV 221 (301)
T ss_dssp HHHHTCEEEE------ECCTTCCCCHHHHHHHTCEEESCHHHHHTTCSEEEECC
T ss_pred HHHcCCEEEE------ECCchhcCCHHHHhhceeEEECCHHHHhcCCCEEEecC
Confidence 9888887654 455555432100 0 0011223445688999776544
No 161
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=49.84 E-value=17 Score=35.04 Aligned_cols=78 Identities=17% Similarity=0.251 Sum_probs=53.5
Q ss_pred EEcccchHHHHHHHHHHhcccCCCCCCCCcEEEEeeCccccccccchHHHHHHHhhhHcCCCCEEEEeeeeeeeecCCCc
Q 007533 112 QVVPHITDEIQDWIERVAMIPVDGKEGPVDVCVIELGGTIGDIESMPFIEALGQFSYRVGPGNFCLIHVSLVPVLNVVGE 191 (599)
Q Consensus 112 qviphit~~i~~~i~~~~~~p~d~~~~~~dv~i~e~ggtvgdies~pf~ea~rq~~~~~g~~n~~~ihv~~vp~~~~~~e 191 (599)
.|||-|.|+ +.++++- ..++++|++ ++|+++.+. +.+.+++. .| ...|||+.++--|+
T Consensus 11 piI~Avr~~--~~l~~al-------~s~~~~ifl-l~g~i~~l~-----~~v~~lk~-~~--K~v~Vh~Dli~Gls---- 68 (192)
T 3kts_A 11 SIIPAAHNQ--KDMEKIL-------ELDLTYMVM-LETHVAQLK-----ALVKYAQA-GG--KKVLLHADLVNGLK---- 68 (192)
T ss_dssp CEEEEESSS--HHHHHHT-------TSSCCEEEE-CSEETTTHH-----HHHHHHHH-TT--CEEEEEGGGEETCC----
T ss_pred CEEEEecCH--HHHHHHH-------cCCCCEEEE-ecCcHHHHH-----HHHHHHHH-cC--CeEEEecCchhccC----
Confidence 578877664 3355543 345788888 888777654 44455443 34 48999999988663
Q ss_pred cccCCchhhhhhhhcCCCcccEEEE
Q 007533 192 QKTKPTQHSVRGLRGQGLTPNILAC 216 (599)
Q Consensus 192 ~ktkptq~sv~~Lrs~Gi~pd~iv~ 216 (599)
+-+.+++-|.. +..||+||-
T Consensus 69 ----~d~~ai~fL~~-~~~pdGIIs 88 (192)
T 3kts_A 69 ----NDDYAIDFLCT-EICPDGIIS 88 (192)
T ss_dssp ----CSHHHHHHHHH-TTCCSEEEE
T ss_pred ----CcHHHHHHHHh-CCCCCEEEe
Confidence 45678887764 889999874
No 162
>2j37_W Signal recognition particle 54 kDa protein (SRP54); ribosome, SRP, translation/RNA; 8.00A {Canis SP} PDB: 1wgw_A
Probab=49.28 E-value=20 Score=39.19 Aligned_cols=40 Identities=23% Similarity=0.348 Sum_probs=35.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccc
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYL 43 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~dpyl 43 (599)
+.|.++|- .|.||=.+++.|...|+.+|.+|..+-.|||-
T Consensus 102 ~vI~ivG~--~GvGKTTl~~kLA~~l~~~G~kVllVd~D~~r 141 (504)
T 2j37_W 102 NVIMFVGL--QGSGKTTTCSKLAYYYQRKGWKTCLICADTFR 141 (504)
T ss_dssp EEEEEECS--TTSSHHHHHHHHHHHHHHTTCCEEEEEECCSS
T ss_pred eEEEEECC--CCCCHHHHHHHHHHHHHhCCCeEEEEeccccc
Confidence 45777754 79999999999999999999999999999974
No 163
>3qk7_A Transcriptional regulators; structural genomics, NEW YORK structural genomix research CO NYSGXRC, PSI-2, protein structur initiative; 2.70A {Yersinia pestis}
Probab=48.84 E-value=33 Score=33.24 Aligned_cols=85 Identities=14% Similarity=0.142 Sum_probs=43.7
Q ss_pred CceEEEEEeecC--CCcchH-HHHHHHHHHcCCcceeeeEEEEecCCCCCCccccCCchhhhHHHHhc--cCCCEEEeCC
Q 007533 294 EPVRIAMVGKYT--GLSDAY-LSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLL--KGADGILVPG 368 (599)
Q Consensus 294 ~~v~IaiVGkY~--~l~DaY-~SIi~AL~haG~~~~v~v~i~wi~s~~le~~~~~~~p~~y~~a~~~L--~~~DGIlVPG 368 (599)
++.+||++=... .+.+.| ..+++.++.+..+....+.+.+.+ +.+. .. .+.+.+ .++||||+.+
T Consensus 5 ~s~~Igvi~~~~~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~--~~~~------~~---~~~~~l~~~~vdGiIi~~ 73 (294)
T 3qk7_A 5 RTDAIALAYPSRPRVLNNSTFLEMISWIGIELGKRGLDLLLIPDE--PGEK------YQ---SLIHLVETRRVDALIVAH 73 (294)
T ss_dssp CCCEEEEEEESCSGGGSCHHHHHHHHHHHHHHHHTTCEEEEEEEC--TTCC------CH---HHHHHHHHTCCSEEEECS
T ss_pred ccceEEEEecCCCccccChhHHHHHHHHHHHHHHCCCEEEEEeCC--Chhh------HH---HHHHHHHcCCCCEEEEeC
Confidence 456799884310 233344 345555555444444433443433 2111 01 112222 4899999987
Q ss_pred CCCCCchhHHHHHHHHHHHcCCCEEEE
Q 007533 369 GFGNRGVQGKILAAKYAREHRIPYLGI 395 (599)
Q Consensus 369 GfG~rg~eg~i~aik~are~~iP~LGI 395 (599)
..... ..++.+.+.++|+.-+
T Consensus 74 ~~~~~------~~~~~l~~~~iPvV~~ 94 (294)
T 3qk7_A 74 TQPED------FRLQYLQKQNFPFLAL 94 (294)
T ss_dssp CCSSC------HHHHHHHHTTCCEEEE
T ss_pred CCCCh------HHHHHHHhCCCCEEEE
Confidence 54322 3456667778887655
No 164
>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}
Probab=48.75 E-value=8.7 Score=36.78 Aligned_cols=35 Identities=43% Similarity=0.606 Sum_probs=25.2
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 007533 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (599)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~d 40 (599)
||-++||||- +|||+.++- .|++..|.+|...-.+
T Consensus 4 ~k~vlITGas-~gIG~~~a~----~l~~~~g~~v~~~~~~ 38 (244)
T 4e4y_A 4 MANYLVTGGS-KGIGKAVVE----LLLQNKNHTVINIDIQ 38 (244)
T ss_dssp CEEEEEETTT-SHHHHHHHH----HHTTSTTEEEEEEESS
T ss_pred CCeEEEeCCC-ChHHHHHHH----HHHhcCCcEEEEeccc
Confidence 6889999986 888886553 3444489988876544
No 165
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=48.54 E-value=12 Score=35.88 Aligned_cols=33 Identities=30% Similarity=0.470 Sum_probs=24.9
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 007533 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (599)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~ 39 (599)
+|-++||||- +|||+.+ .+.|..+|++|...-.
T Consensus 3 ~k~vlVTGas-~GIG~a~-----a~~l~~~G~~V~~~~r 35 (235)
T 3l6e_A 3 LGHIIVTGAG-SGLGRAL-----TIGLVERGHQVSMMGR 35 (235)
T ss_dssp CCEEEEESTT-SHHHHHH-----HHHHHHTTCEEEEEES
T ss_pred CCEEEEECCC-CHHHHHH-----HHHHHHCCCEEEEEEC
Confidence 4789999986 7888754 4567788999877643
No 166
>3d02_A Putative LACI-type transcriptional regulator; periplasmic sugar-binding protein, structura genomics; HET: MSE GOL; 1.30A {Klebsiella pneumoniae subsp}
Probab=48.52 E-value=76 Score=30.38 Aligned_cols=88 Identities=11% Similarity=0.010 Sum_probs=44.6
Q ss_pred CceEEEEEeecCCCcchH-HHHHHHHHHcCCcceeeeEEEEecCCCCCCccccCCchhhhHHHHhc--cCCCEEEeCCCC
Q 007533 294 EPVRIAMVGKYTGLSDAY-LSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLL--KGADGILVPGGF 370 (599)
Q Consensus 294 ~~v~IaiVGkY~~l~DaY-~SIi~AL~haG~~~~v~v~i~wi~s~~le~~~~~~~p~~y~~a~~~L--~~~DGIlVPGGf 370 (599)
++.+|+++-. ...+.| ..+++.++.+.-+....+ .++...+ .+++....+.+.+ .++||||+.+..
T Consensus 3 ~~~~Ig~i~~--~~~~~~~~~~~~g~~~~~~~~g~~~--~~~~~~~-------~~~~~~~~~~~~l~~~~vdgiii~~~~ 71 (303)
T 3d02_A 3 AEKTVVNISK--VDGMPWFNRMGEGVVQAGKEFNLNA--SQVGPSS-------TDAPQQVKIIEDLIARKVDAITIVPND 71 (303)
T ss_dssp -CEEEEEECS--CSSCHHHHHHHHHHHHHHHHTTEEE--EEECCSS-------SCHHHHHHHHHHHHHTTCSEEEECCSC
T ss_pred CceEEEEEec--cCCChHHHHHHHHHHHHHHHcCCEE--EEECCCC-------CCHHHHHHHHHHHHHcCCCEEEEecCC
Confidence 3578999843 233344 356665555444333332 2222111 1122222222222 689999997631
Q ss_pred CCCchhHHHHHHHHHHHcCCCEEEEe
Q 007533 371 GNRGVQGKILAAKYAREHRIPYLGIC 396 (599)
Q Consensus 371 G~rg~eg~i~aik~are~~iP~LGIC 396 (599)
.......++.+.+.++|+.-+.
T Consensus 72 ----~~~~~~~~~~~~~~~ipvV~~~ 93 (303)
T 3d02_A 72 ----ANVLEPVFKKARDAGIVVLTNE 93 (303)
T ss_dssp ----HHHHHHHHHHHHHTTCEEEEES
T ss_pred ----hHHHHHHHHHHHHCCCeEEEEe
Confidence 1223345677778899987653
No 167
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=48.32 E-value=13 Score=32.34 Aligned_cols=33 Identities=18% Similarity=0.198 Sum_probs=26.0
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~dp 41 (599)
+.|+|+|+ |-+..++...|..+|++|..+-.||
T Consensus 7 ~~v~I~G~-------G~iG~~la~~L~~~g~~V~~id~~~ 39 (141)
T 3llv_A 7 YEYIVIGS-------EAAGVGLVRELTAAGKKVLAVDKSK 39 (141)
T ss_dssp CSEEEECC-------SHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CEEEEECC-------CHHHHHHHHHHHHCCCeEEEEECCH
Confidence 45777775 4477889999999999999887664
No 168
>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}
Probab=48.20 E-value=9.9 Score=35.88 Aligned_cols=31 Identities=26% Similarity=0.544 Sum_probs=23.3
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 007533 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (599)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~ 37 (599)
||.|+||||- +|||+.++ +.|..+|++|..+
T Consensus 1 ~k~vlITGas-ggiG~~~a-----~~l~~~G~~v~~~ 31 (245)
T 2ph3_A 1 MRKALITGAS-RGIGRAIA-----LRLAEDGFALAIH 31 (245)
T ss_dssp CCEEEETTTT-SHHHHHHH-----HHHHTTTCEEEEE
T ss_pred CCEEEEeCCC-chHHHHHH-----HHHHHCCCEEEEE
Confidence 6889999994 78887554 5566788887654
No 169
>2fep_A Catabolite control protein A; CCPA, transcriptional regulator; HET: SEP; 2.45A {Bacillus subtilis} PDB: 2nzu_G* 1sxh_A 1sxi_A 1sxg_A* 2nzv_G* 2oen_G*
Probab=47.98 E-value=77 Score=30.45 Aligned_cols=32 Identities=22% Similarity=0.255 Sum_probs=20.9
Q ss_pred cCCCEEEeCCCCCCCchhHHHHHHHHHHHcCCCEEEEe
Q 007533 359 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGIC 396 (599)
Q Consensus 359 ~~~DGIlVPGGfG~rg~eg~i~aik~are~~iP~LGIC 396 (599)
.++||||+.+.... . ..++.+.+.++|+.-+.
T Consensus 71 ~~vdgiIi~~~~~~---~---~~~~~l~~~~iPvV~~~ 102 (289)
T 2fep_A 71 KQVDGIVFMGGNIT---D---EHVAEFKRSPVPIVLAA 102 (289)
T ss_dssp TTCSEEEECCSCCC---H---HHHHHHHHSSSCEEEES
T ss_pred CCCCEEEEecCCCC---H---HHHHHHHhcCCCEEEEc
Confidence 68999999774221 1 23555667789987653
No 170
>1kht_A Adenylate kinase; phosphotransferase, signaling protein, transferase; HET: AMP; 2.50A {Methanococcus voltae} SCOP: c.37.1.1 PDB: 3h86_B* 1ki9_A
Probab=47.96 E-value=16 Score=32.79 Aligned_cols=34 Identities=26% Similarity=0.341 Sum_probs=27.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~ 37 (599)
++|+++|. +|-||...+..|...|...|++...+
T Consensus 4 ~~I~i~G~--~GsGKsT~~~~L~~~l~~~g~~~~~i 37 (192)
T 1kht_A 4 KVVVVTGV--PGVGSTTSSQLAMDNLRKEGVNYKMV 37 (192)
T ss_dssp CEEEEECC--TTSCHHHHHHHHHHHHHTTTCCCEEE
T ss_pred eEEEEECC--CCCCHHHHHHHHHHHHHhcCcceEEE
Confidence 48999995 89999999999999888877544433
No 171
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=47.91 E-value=18 Score=33.50 Aligned_cols=34 Identities=32% Similarity=0.426 Sum_probs=25.0
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 007533 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (599)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~dp 41 (599)
|| |+||||- |-+.+.+-..|.++|++|..+--+|
T Consensus 1 Mk-ilVtGat------G~iG~~l~~~L~~~g~~V~~~~R~~ 34 (224)
T 3h2s_A 1 MK-IAVLGAT------GRAGSAIVAEARRRGHEVLAVVRDP 34 (224)
T ss_dssp CE-EEEETTT------SHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CE-EEEEcCC------CHHHHHHHHHHHHCCCEEEEEEecc
Confidence 77 9999974 4444566677778899999886554
No 172
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=47.81 E-value=20 Score=32.84 Aligned_cols=34 Identities=32% Similarity=0.313 Sum_probs=24.6
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 007533 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (599)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~dp 41 (599)
|| |+||||- |-+.+.+-..|.++|++|..+--+|
T Consensus 1 Mk-vlVtGat------G~iG~~l~~~L~~~g~~V~~~~R~~ 34 (221)
T 3ew7_A 1 MK-IGIIGAT------GRAGSRILEEAKNRGHEVTAIVRNA 34 (221)
T ss_dssp CE-EEEETTT------SHHHHHHHHHHHHTTCEEEEEESCS
T ss_pred Ce-EEEEcCC------chhHHHHHHHHHhCCCEEEEEEcCc
Confidence 67 8999974 4444566667788899999876553
No 173
>3gd5_A Otcase, ornithine carbamoyltransferase; structural genomics, NYSGXRC, target 9454P, operon, amino-acid biosynthesis, ARGI biosynthesis; 2.10A {Gloeobacter violaceus}
Probab=47.69 E-value=84 Score=32.44 Aligned_cols=98 Identities=15% Similarity=0.198 Sum_probs=61.0
Q ss_pred ccCCchhhhhhhhcCCCcccEEEEecCCCCChhhhhccccCCCCCCCCeeeeCCCCCccchhHHHHHHHHHHHHHcCCCC
Q 007533 193 KTKPTQHSVRGLRGQGLTPNILACRSTVALDDNVKGKLSQFCHVPEQNIITLYDVPNIWHIPLLLRKAHEAIFKVLNLQG 272 (599)
Q Consensus 193 ktkptq~sv~~Lrs~Gi~pd~iv~R~~~~l~~~~~~Kislfc~v~~~~Vi~~~dv~tiy~vPl~L~g~~~~i~~~l~l~~ 272 (599)
|--+-.-+++-|.+. .|+|++|... ...-+.+|-++.|| ||+.-| ..+|=...|--++ -|.++++
T Consensus 89 kgEsl~DTarvLs~~---~D~iviR~~~---~~~~~~lA~~~~vP---VINag~--~~~HPtQaLaDl~-Ti~e~~g--- 153 (323)
T 3gd5_A 89 RGEPVRDTARVLGRY---VDGLAIRTFA---QTELEEYAHYAGIP---VINALT--DHEHPCQVVADLL-TIRENFG--- 153 (323)
T ss_dssp --CCHHHHHHHHTTT---CSEEEEECSS---HHHHHHHHHHHCSC---EEEEEC--SSCCHHHHHHHHH-HHHHHHS---
T ss_pred CCCCHHHHHHHHHHh---CCEEEEecCC---hhHHHHHHHhCCCC---EEeCCC--CCCCcHHHHHHHH-HHHHHhC---
Confidence 444666777777555 8999999875 45556677777776 888877 4555443331111 1111111
Q ss_pred CCCchhhHHHHHHHhhhcCCCCceEEEEEeecCCCcchHHHHHHHHHHcCCccee
Q 007533 273 TTKEPLLKEWTSRAEICDGLHEPVRIAMVGKYTGLSDAYLSILKALLHASVDLRK 327 (599)
Q Consensus 273 ~~~~~~l~~W~~l~~~~~~~~~~v~IaiVGkY~~l~DaY~SIi~AL~haG~~~~v 327 (599)
.-+.+|||+|||- ...-.|.+.++...|+++.+
T Consensus 154 -------------------~l~glkva~vGD~---~rva~Sl~~~~~~~G~~v~~ 186 (323)
T 3gd5_A 154 -------------------RLAGLKLAYVGDG---NNVAHSLLLGCAKVGMSIAV 186 (323)
T ss_dssp -------------------CCTTCEEEEESCC---CHHHHHHHHHHHHHTCEEEE
T ss_pred -------------------CCCCCEEEEECCC---CcHHHHHHHHHHHcCCEEEE
Confidence 1246899999975 33567889999888887654
No 174
>1t0b_A THUA-like protein; trehalose metabolism, NCS symmetry, structural genomics, PSI, protein structure initiative; 1.70A {Geobacillus stearothermophilus} SCOP: c.23.16.6
Probab=47.36 E-value=52 Score=32.47 Aligned_cols=86 Identities=13% Similarity=0.097 Sum_probs=51.3
Q ss_pred ceEEEEEeecCCCcchH----H---------HHHHHHHHcCCcceeeeEEEEecCCCCCCccccCCchhhhHHHHhccCC
Q 007533 295 PVRIAMVGKYTGLSDAY----L---------SILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGA 361 (599)
Q Consensus 295 ~v~IaiVGkY~~l~DaY----~---------SIi~AL~haG~~~~v~v~i~wi~s~~le~~~~~~~p~~y~~a~~~L~~~ 361 (599)
++||.+.++|. +++. . -+.++|+..|+.+.. +..++.+.. .++ +.|+++
T Consensus 7 ~~~vlv~~~~~--h~~~~~~v~~~~p~g~~~~i~~~L~~~gf~V~~------~t~dd~~~~---~~~-------~~L~~~ 68 (252)
T 1t0b_A 7 PIRVVVWNEFR--HEKKDEQVRAIYPEGMHTVIASYLAEAGFDAAT------AVLDEPEHG---LTD-------EVLDRC 68 (252)
T ss_dssp CCEEEEEECCC--HHHHCHHHHHHCTTCHHHHHHHHHHHTTCEEEE------EESSSGGGG---CCH-------HHHHTC
T ss_pred CcEEEEECCcc--ccccchhhhccCchHHHHHHHHHHhhCCcEEEE------EeccCcccc---CCH-------hHHhcC
Confidence 57899988765 2221 1 236778887876643 222222110 011 468999
Q ss_pred CEEEeCC-CCCCCchhHHHHHHHHHHHcCCCEEEEehh
Q 007533 362 DGILVPG-GFGNRGVQGKILAAKYAREHRIPYLGICLG 398 (599)
Q Consensus 362 DGIlVPG-GfG~rg~eg~i~aik~are~~iP~LGICLG 398 (599)
|.||+-| ..+..-.+...++++...+++.+++||=-|
T Consensus 69 DvvV~~~~~~~~~l~~~~~~al~~~V~~GgG~vgiH~a 106 (252)
T 1t0b_A 69 DVLVWWGHIAHDEVKDEVVERVHRRVLEGMGLIVLHSG 106 (252)
T ss_dssp SEEEEECSSCGGGSCHHHHHHHHHHHHTTCEEEEEGGG
T ss_pred CEEEEecCCCCCcCCHHHHHHHHHHHHcCCCEEEEccc
Confidence 9999843 122222345567788888899999999554
No 175
>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}
Probab=47.30 E-value=14 Score=35.39 Aligned_cols=31 Identities=29% Similarity=0.278 Sum_probs=23.3
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 007533 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (599)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~ 37 (599)
+|-++||||- +|||+.++ +.|..+|++|...
T Consensus 1 ~k~vlVTGas-~gIG~~ia-----~~l~~~G~~V~~~ 31 (244)
T 1zmo_A 1 MVIALVTHAR-HFAGPAAV-----EALTQDGYTVVCH 31 (244)
T ss_dssp -CEEEESSTT-STTHHHHH-----HHHHHTTCEEEEC
T ss_pred CCEEEEECCC-ChHHHHHH-----HHHHHCCCEEEEe
Confidence 5789999985 89998654 4566789888654
No 176
>3uug_A Multiple sugar-binding periplasmic receptor CHVE; periplasmic binding protein, sugar-binding protein, sugar binding protein; HET: BDP; 1.75A {Agrobacterium tumefaciens} PDB: 3urm_A*
Probab=46.72 E-value=63 Score=31.47 Aligned_cols=85 Identities=14% Similarity=0.026 Sum_probs=44.1
Q ss_pred ceEEEEEeecCCCcchHH-HHHHHHHHcCCcceeeeEEEEecCCCCCCccccCCchhhhHHHHh--ccCCCEEEeCCCCC
Q 007533 295 PVRIAMVGKYTGLSDAYL-SILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKL--LKGADGILVPGGFG 371 (599)
Q Consensus 295 ~v~IaiVGkY~~l~DaY~-SIi~AL~haG~~~~v~v~i~wi~s~~le~~~~~~~p~~y~~a~~~--L~~~DGIlVPGGfG 371 (599)
+.+||++-. .+.+.|. .+.+.++.+..+....+.+.. +.. +++.-....+. -.++||||+.+-..
T Consensus 3 ~~~Igvi~~--~~~~~~~~~~~~gi~~~a~~~g~~~~~~~--~~~--------~~~~~~~~i~~~~~~~vdgiIi~~~~~ 70 (330)
T 3uug_A 3 KGSVGIAMP--TKSSARWIDDGNNIVKQLQEAGYKTDLQY--ADD--------DIPNQLSQIENMVTKGVKVLVIASIDG 70 (330)
T ss_dssp CCEEEEEEC--CSSSTHHHHHHHHHHHHHHHTTCEEEEEE--CTT--------CHHHHHHHHHHHHHHTCSEEEECCSSG
T ss_pred CcEEEEEeC--CCcchHHHHHHHHHHHHHHHcCCEEEEee--CCC--------CHHHHHHHHHHHHHcCCCEEEEEcCCc
Confidence 468998843 3444444 566555555444444333333 221 11111111122 25899999987321
Q ss_pred CCchhHHHHHHHHHHHcCCCEEEE
Q 007533 372 NRGVQGKILAAKYAREHRIPYLGI 395 (599)
Q Consensus 372 ~rg~eg~i~aik~are~~iP~LGI 395 (599)
......++.+.+.++|+.-+
T Consensus 71 ----~~~~~~~~~~~~~giPvV~~ 90 (330)
T 3uug_A 71 ----TTLSDVLKQAGEQGIKVIAY 90 (330)
T ss_dssp ----GGGHHHHHHHHHTTCEEEEE
T ss_pred ----hhHHHHHHHHHHCCCCEEEE
Confidence 22335567777888988654
No 177
>3kb2_A SPBC2 prophage-derived uncharacterized protein YORR; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; HET: G3D; 2.20A {Bacillus subtilis} SCOP: c.37.1.1 PDB: 2axp_A*
Probab=46.26 E-value=14 Score=32.55 Aligned_cols=25 Identities=20% Similarity=0.251 Sum_probs=19.1
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHH
Q 007533 1 MKYVLVTGGVVSGLGKGVTASSIGVLL 27 (599)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~~s~g~ll 27 (599)
|+.|+++|+ ||-||..++.-|...|
T Consensus 1 M~~i~l~G~--~GsGKsT~~~~L~~~l 25 (173)
T 3kb2_A 1 MTLIILEGP--DCCFKSTVAAKLSKEL 25 (173)
T ss_dssp -CEEEEECS--SSSSHHHHHHHHHHHH
T ss_pred CeEEEEECC--CCCCHHHHHHHHHHHh
Confidence 788999995 8999988777666544
No 178
>3r7f_A Aspartate carbamoyltransferase; aspartate transcarbamoylase, carbamoyl phosphate, transferas catalytic cycle; 2.10A {Bacillus subtilis} PDB: 3r7d_A 3r7l_A* 2at2_A
Probab=45.86 E-value=1.5e+02 Score=30.37 Aligned_cols=126 Identities=17% Similarity=0.144 Sum_probs=72.0
Q ss_pred hHHHHHHHhhhHcCCCCEEEEeeeeeeeecCCCccccCCchhhhhhhhcCCCcccEEEEecCCCCChhhhhccccCCCCC
Q 007533 158 PFIEALGQFSYRVGPGNFCLIHVSLVPVLNVVGEQKTKPTQHSVRGLRGQGLTPNILACRSTVALDDNVKGKLSQFCHVP 237 (599)
Q Consensus 158 pf~ea~rq~~~~~g~~n~~~ihv~~vp~~~~~~e~ktkptq~sv~~Lrs~Gi~pd~iv~R~~~~l~~~~~~Kislfc~v~ 237 (599)
-|--|++|| | .+++++- .+.+.-.|--+...+++-|.+.| +|+|++|.... ..-+.+|-++.||
T Consensus 53 SFE~A~~~L----G-g~~i~l~------~~~ss~~kgEsl~DTarvLs~~~--~D~iviR~~~~---~~~~~la~~~~vP 116 (304)
T 3r7f_A 53 SFEVAEKKL----G-MNVLNLD------GTSTSVQKGETLYDTIRTLESIG--VDVCVIRHSED---EYYEELVSQVNIP 116 (304)
T ss_dssp HHHHHHHHT----T-CEEEEEE------TTSTTSCSSSCHHHHHHHHHHHT--CCEEEEECSST---TCHHHHHHHCSSC
T ss_pred hHHHHHHHC----C-CeEEEEC------cccccCCCCCCHHHHHHHHHHhc--CCEEEEecCCh---hHHHHHHHhCCCC
Confidence 466666665 4 3344431 12233345557788888887766 59999998754 3344555566676
Q ss_pred CCCeeeeCCCCCccchhHHHHHHHHHHHHHcCCCCCCCchhhHHHHHHHhhhcCCCCceEEEEEeecCCCcchHHHHHHH
Q 007533 238 EQNIITLYDVPNIWHIPLLLRKAHEAIFKVLNLQGTTKEPLLKEWTSRAEICDGLHEPVRIAMVGKYTGLSDAYLSILKA 317 (599)
Q Consensus 238 ~~~Vi~~~dv~tiy~vPl~L~g~~~~i~~~l~l~~~~~~~~l~~W~~l~~~~~~~~~~v~IaiVGkY~~l~DaY~SIi~A 317 (599)
||+.-|-+ .+|=...|--++ .|.++++ .-+.+||++||+-.. ...-.|.+.+
T Consensus 117 ---VINagdg~-~~HPtQaLaDl~-Ti~e~~g----------------------~l~glkva~vGD~~~-~rva~Sl~~~ 168 (304)
T 3r7f_A 117 ---ILNAGDGC-GQHPTQSLLDLM-TIYEEFN----------------------TFKGLTVSIHGDIKH-SRVARSNAEV 168 (304)
T ss_dssp ---EEESCCTT-SCCHHHHHHHHH-HHHHHHS----------------------CCTTCEEEEESCCTT-CHHHHHHHHH
T ss_pred ---EEeCCCCC-CcCcHHHHHHHH-HHHHHhC----------------------CCCCCEEEEEcCCCC-cchHHHHHHH
Confidence 88875422 333332221111 1112111 124679999997431 1245788999
Q ss_pred HHHcCCccee
Q 007533 318 LLHASVDLRK 327 (599)
Q Consensus 318 L~haG~~~~v 327 (599)
+...|+++.+
T Consensus 169 ~~~~G~~v~~ 178 (304)
T 3r7f_A 169 LTRLGARVLF 178 (304)
T ss_dssp HHHTTCEEEE
T ss_pred HHHcCCEEEE
Confidence 9998887654
No 179
>4hf7_A Putative acylhydrolase; PF13472 family, structural genomics, joint center for struct genomics, JCSG, protein structure initiative; HET: OSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=45.71 E-value=25 Score=32.56 Aligned_cols=61 Identities=11% Similarity=0.117 Sum_probs=33.4
Q ss_pred hHHHHHHHHHHhcccCCCCCCCCcEEEEeeCcccccccc-------chHHHHHHHhhhHcCCCCEEEEeeeeeeee
Q 007533 118 TDEIQDWIERVAMIPVDGKEGPVDVCVIELGGTIGDIES-------MPFIEALGQFSYRVGPGNFCLIHVSLVPVL 186 (599)
Q Consensus 118 t~~i~~~i~~~~~~p~d~~~~~~dv~i~e~ggtvgdies-------~pf~ea~rq~~~~~g~~n~~~ihv~~vp~~ 186 (599)
|..+..|+.+... ..+||+|+|.+|. .|+-. .-+.+-++++.......+.-.|-+|..|.-
T Consensus 63 t~~~l~r~~~~v~------~~~Pd~vvi~~G~--ND~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~iil~~~~P~~ 130 (209)
T 4hf7_A 63 SYQFLLRFREDVI------NLSPALVVINAGT--NDVAENTGAYNEDYTFGNIASMAELAKANKIKVILTSVLPAA 130 (209)
T ss_dssp HHHHHHHHHHHTG------GGCCSEEEECCCH--HHHTTSSSSCCHHHHHHHHHHHHHHHHHTTCEEEEECCCCCS
T ss_pred HHHHHHHHHHHHH------hcCCCEEEEEeCC--CcCccccccccHHHHHHHHHHhhHHHhccCceEEEEeeeccC
Confidence 4455666665321 3579999999985 45411 123344555543332345555556666754
No 180
>2wwf_A Thymidilate kinase, putative; transferase, malaria; HET: TMP ADP; 1.89A {Plasmodium falciparum} PDB: 2wwg_A* 2wwh_A* 2wwi_A*
Probab=45.67 E-value=22 Score=32.71 Aligned_cols=34 Identities=21% Similarity=0.319 Sum_probs=29.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~ 37 (599)
+.|++||+ +|-||...+.-|...|...|++|..+
T Consensus 11 ~~I~l~G~--~GsGKST~~~~L~~~l~~~~~~~~~~ 44 (212)
T 2wwf_A 11 KFIVFEGL--DRSGKSTQSKLLVEYLKNNNVEVKHL 44 (212)
T ss_dssp CEEEEEES--TTSSHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CEEEEEcC--CCCCHHHHHHHHHHHHHHcCCcEEEE
Confidence 57999997 68899999999999999999988543
No 181
>3bbl_A Regulatory protein of LACI family; protein structure initiative II, PSI-II, NYSGXRC, transcript regulator, periplasmic binding protein; 2.35A {Chloroflexus aggregans}
Probab=45.47 E-value=54 Score=31.48 Aligned_cols=32 Identities=13% Similarity=0.298 Sum_probs=21.3
Q ss_pred cCCCEEEeCCCCCCCchhHHHHHHHHHHHcCCCEEEEe
Q 007533 359 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGIC 396 (599)
Q Consensus 359 ~~~DGIlVPGGfG~rg~eg~i~aik~are~~iP~LGIC 396 (599)
.++||||+.+...+. ..++.+.+.++|+.-+.
T Consensus 63 ~~vdgiIi~~~~~~~------~~~~~l~~~~iPvV~~~ 94 (287)
T 3bbl_A 63 GNVDGFVLSSINYND------PRVQFLLKQKFPFVAFG 94 (287)
T ss_dssp TCCSEEEECSCCTTC------HHHHHHHHTTCCEEEES
T ss_pred CCCCEEEEeecCCCc------HHHHHHHhcCCCEEEEC
Confidence 579999997743221 34556667789987653
No 182
>3hp4_A GDSL-esterase; psychrotrophic, monoethylphosphonate, hydrolase; HET: MIR; 1.35A {Pseudoalteromonas SP} SCOP: c.23.10.0
Probab=45.41 E-value=30 Score=30.72 Aligned_cols=76 Identities=9% Similarity=0.118 Sum_probs=41.0
Q ss_pred chHhhHHHHhhhhcCCCCCCeeEEc-----ccchHHHHHHHHHHhcccCCCCCCCCcEEEEeeCcccccc----ccchHH
Q 007533 90 TGKIYQSVIDKERKGDYLGKTVQVV-----PHITDEIQDWIERVAMIPVDGKEGPVDVCVIELGGTIGDI----ESMPFI 160 (599)
Q Consensus 90 tgkiy~~vi~ker~g~ylg~tvqvi-----phit~~i~~~i~~~~~~p~d~~~~~~dv~i~e~ggtvgdi----es~pf~ 160 (599)
.++-|...+.+.=... |..++|+ =.-|....+++.+... ..+||+++|++|+ .|+ ...-|.
T Consensus 20 ~~~~~~~~l~~~l~~~--~~~~~v~n~g~~G~~~~~~~~~~~~~~~------~~~pd~vvi~~G~--ND~~~~~~~~~~~ 89 (185)
T 3hp4_A 20 QEEGWVKLLQDKYDAE--QSDIVLINASISGETSGGALRRLDALLE------QYEPTHVLIELGA--NDGLRGFPVKKMQ 89 (185)
T ss_dssp GGGSHHHHHHHHHHHT--TCCEEEEECCCTTCCHHHHHHHHHHHHH------HHCCSEEEEECCH--HHHHTTCCHHHHH
T ss_pred CcccHHHHHHHHHHhc--CCcEEEEECCcCCccHHHHHHHHHHHHh------hcCCCEEEEEeec--ccCCCCcCHHHHH
Confidence 3456777766543322 4556654 1224445555555431 2378999999995 453 223455
Q ss_pred HHHHHhhhHcCCCCE
Q 007533 161 EALGQFSYRVGPGNF 175 (599)
Q Consensus 161 ea~rq~~~~~g~~n~ 175 (599)
+.+++|-.++...+.
T Consensus 90 ~~~~~~i~~~~~~~~ 104 (185)
T 3hp4_A 90 TNLTALVKKSQAANA 104 (185)
T ss_dssp HHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHcCC
Confidence 566655555444443
No 183
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0
Probab=45.34 E-value=13 Score=35.83 Aligned_cols=31 Identities=39% Similarity=0.534 Sum_probs=23.5
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 007533 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (599)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~ 37 (599)
||.++||||- +|||+. +.+.|-++|++|.+.
T Consensus 7 ~k~vlVTGas-~gIG~~-----~a~~l~~~G~~v~~~ 37 (264)
T 3i4f_A 7 VRHALITAGT-KGLGKQ-----VTEKLLAKGYSVTVT 37 (264)
T ss_dssp CCEEEETTTT-SHHHHH-----HHHHHHHTTCEEEEE
T ss_pred cCEEEEeCCC-chhHHH-----HHHHHHHCCCEEEEE
Confidence 5889999985 777764 456677889988764
No 184
>3o74_A Fructose transport system repressor FRUR; dual transcriptional regulator, DNA, transcription; 2.00A {Pseudomonas putida} PDB: 3o75_A*
Probab=44.78 E-value=65 Score=30.23 Aligned_cols=84 Identities=17% Similarity=0.271 Sum_probs=42.3
Q ss_pred ceEEEEEeecCCCcchHH-HHHHHHHHcCCcceeeeEEEEecCCCCCCccccCCchhhhHHHHhc--cCCCEEEeCCCCC
Q 007533 295 PVRIAMVGKYTGLSDAYL-SILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLL--KGADGILVPGGFG 371 (599)
Q Consensus 295 ~v~IaiVGkY~~l~DaY~-SIi~AL~haG~~~~v~v~i~wi~s~~le~~~~~~~p~~y~~a~~~L--~~~DGIlVPGGfG 371 (599)
+-+||++- ....+.|. .+++.++.+..+....+.+. .+.. +++.-....+.+ .++||||+.+...
T Consensus 2 s~~Igvi~--~~~~~~~~~~~~~gi~~~a~~~g~~~~~~--~~~~--------~~~~~~~~~~~l~~~~vdgiIi~~~~~ 69 (272)
T 3o74_A 2 TRTLGFIL--PDLENPSYARIAKQLEQGARARGYQLLIA--SSDD--------QPDSERQLQQLFRARRCDALFVASCLP 69 (272)
T ss_dssp CCEEEEEE--SCTTCHHHHHHHHHHHHHHHHTTCEEEEE--ECTT--------CHHHHHHHHHHHHHTTCSEEEECCCCC
T ss_pred ceEEEEEe--CCCcChhHHHHHHHHHHHHHHCCCEEEEE--eCCC--------CHHHHHHHHHHHHHcCCCEEEEecCcc
Confidence 34788883 33444544 46655555544444333332 2221 111111122222 5899999987542
Q ss_pred CCchhHHHHHHHHHHHcCCCEEEE
Q 007533 372 NRGVQGKILAAKYAREHRIPYLGI 395 (599)
Q Consensus 372 ~rg~eg~i~aik~are~~iP~LGI 395 (599)
. . . ..++.+.+.++|+.-+
T Consensus 70 ~-~-~---~~~~~~~~~~iPvV~~ 88 (272)
T 3o74_A 70 P-E-D---DSYRELQDKGLPVIAI 88 (272)
T ss_dssp S-S-C---CHHHHHHHTTCCEEEE
T ss_pred c-c-H---HHHHHHHHcCCCEEEE
Confidence 2 1 1 2345666778998644
No 185
>1p3d_A UDP-N-acetylmuramate--alanine ligase; alpha/beta protein; HET: UMA ANP; 1.70A {Haemophilus influenzae} SCOP: c.5.1.1 c.59.1.1 c.72.2.1 PDB: 1gqq_A* 1p31_A* 1gqy_A*
Probab=44.41 E-value=23 Score=37.91 Aligned_cols=57 Identities=18% Similarity=0.235 Sum_probs=39.2
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccccCCCCCCCccccceEEEccCC
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNTDAGTMSPFEHGEVFVLDDG 64 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~dpyln~d~gtmsp~~hgevfv~~dg 64 (599)
|.|-||| +=||+.|++=|+.+|++.|++.+. .+.--+| +.|...-.+..+++|++=|
T Consensus 119 ~vI~VTG----TnGKTTTt~ml~~iL~~~G~~p~~-~igg~~~-~~~~~~~~~~~d~~VlE~~ 175 (475)
T 1p3d_A 119 HGIAVAG----THGKTTTTAMISMIYTQAKLDPTF-VNGGLVK-SAGKNAHLGASRYLIAEAD 175 (475)
T ss_dssp EEEEEES----SSCHHHHHHHHHHHHHHTTCCCEE-EEEEEET-TTTEEEECCSSSEEEEECC
T ss_pred CEEEEEC----CCCHHHHHHHHHHHHHhCCCCCEE-EECCccc-ccccccccCCCCEEEEEec
Confidence 6788888 469999999999999999998543 3343334 3332111234578888876
No 186
>2yvu_A Probable adenylyl-sulfate kinase; transferase, structural genomics, NPPSFA, national P protein structural and functional analyses; 2.10A {Aeropyrum pernix}
Probab=44.38 E-value=21 Score=32.37 Aligned_cols=39 Identities=33% Similarity=0.344 Sum_probs=33.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccc
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPY 42 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~dpy 42 (599)
++|+++|- +|-||-..+..+...|...|++|..+..|.+
T Consensus 14 ~~i~l~G~--~GsGKsT~~~~L~~~l~~~~~~~~~~~~d~~ 52 (186)
T 2yvu_A 14 IVVWLTGL--PGSGKTTIATRLADLLQKEGYRVEVLDGDWA 52 (186)
T ss_dssp EEEEEECC--TTSSHHHHHHHHHHHHHHTTCCEEEEEHHHH
T ss_pred cEEEEEcC--CCCCHHHHHHHHHHHHHhcCCeEEEeeHHHH
Confidence 57888885 8999999999999999999999888766654
No 187
>3bos_A Putative DNA replication factor; P-loop containing nucleoside triphosphate hydrolases, struct genomics; HET: MSE CDP; 1.75A {Shewanella amazonensis} PDB: 3sc3_A
Probab=44.27 E-value=35 Score=31.46 Aligned_cols=59 Identities=12% Similarity=0.103 Sum_probs=46.9
Q ss_pred EEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccccCCCCCCCccccceEEEccC
Q 007533 3 YVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNTDAGTMSPFEHGEVFVLDD 63 (599)
Q Consensus 3 ~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~dpyln~d~gtmsp~~hgevfv~~d 63 (599)
-++++|- +|.||=.+|..+...+...|++|..+..+.+.+.-...+.-+....|.++||
T Consensus 54 ~~ll~G~--~G~GKT~la~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vliiDe 112 (242)
T 3bos_A 54 AIYLWGP--VKSGRTHLIHAACARANELERRSFYIPLGIHASISTALLEGLEQFDLICIDD 112 (242)
T ss_dssp EEEEECS--TTSSHHHHHHHHHHHHHHTTCCEEEEEGGGGGGSCGGGGTTGGGSSEEEEET
T ss_pred eEEEECC--CCCCHHHHHHHHHHHHHHcCCeEEEEEHHHHHHHHHHHHHhccCCCEEEEec
Confidence 4778886 6999999999999999999999999888777654444455556667888887
No 188
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=44.25 E-value=17 Score=35.02 Aligned_cols=34 Identities=26% Similarity=0.406 Sum_probs=26.0
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~dp 41 (599)
|.|+||||- +|||+. +.+.|..+|++|..+-.++
T Consensus 23 k~vlITGas-~gIG~~-----la~~l~~~G~~V~~~~r~~ 56 (251)
T 3orf_A 23 KNILVLGGS-GALGAE-----VVKFFKSKSWNTISIDFRE 56 (251)
T ss_dssp CEEEEETTT-SHHHHH-----HHHHHHHTTCEEEEEESSC
T ss_pred CEEEEECCC-CHHHHH-----HHHHHHHCCCEEEEEeCCc
Confidence 789999996 777764 5567778899998875543
No 189
>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}
Probab=44.20 E-value=11 Score=35.65 Aligned_cols=33 Identities=24% Similarity=0.307 Sum_probs=25.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~d 40 (599)
|-++||||- +|||+.++ +.|..+|++|...-.+
T Consensus 7 k~vlVTGas-~gIG~~~a-----~~l~~~G~~V~~~~r~ 39 (223)
T 3uce_A 7 TVYVVLGGT-SGIGAELA-----KQLESEHTIVHVASRQ 39 (223)
T ss_dssp EEEEEETTT-SHHHHHHH-----HHHCSTTEEEEEESGG
T ss_pred CEEEEECCC-CHHHHHHH-----HHHHHCCCEEEEecCC
Confidence 789999986 88888665 5577789988876444
No 190
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=43.90 E-value=27 Score=36.92 Aligned_cols=55 Identities=31% Similarity=0.491 Sum_probs=40.2
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccccCCCCCCCcc-----ccceEEEccCCccccCC
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNTDAGTMSPF-----EHGEVFVLDDGGEVDLD 70 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~dpyln~d~gtmsp~-----~hgevfv~~dg~e~dld 70 (599)
|.|-||| +=||+.|++=|..+|++.|++|...- |+ | .|+ +.++++|++=|. -+||
T Consensus 105 ~vI~VTG----TnGKTTT~~ml~~iL~~~g~~~~~~g-----ni--g--~~~~~~~~~~~d~~VlE~~~-~~l~ 164 (439)
T 2x5o_A 105 PIVAITG----SNGKSTVTTLVGEMAKAAGVNVGVGG-----NI--G--LPALMLLDDECELYVLELSS-FQLE 164 (439)
T ss_dssp CEEEEEC----SSSHHHHHHHHHHHHHHTTCCEEEEE-----SS--S--BCHHHHCCTTCCEEEEECCH-HHHH
T ss_pred CEEEEEC----CCCHHHHHHHHHHHHHhcCCCEEEec-----cc--C--HHHHHHhCCCCCEEEEECCc-hhhc
Confidence 5788888 46999999999999999999987543 32 1 122 456899988654 4443
No 191
>3clk_A Transcription regulator; 11017J, PSI-II, NYSGXRC, dimer, structural genomics, protein structure initiative; 2.08A {Lactobacillus plantarum WCFS1}
Probab=43.65 E-value=41 Score=32.31 Aligned_cols=85 Identities=19% Similarity=0.184 Sum_probs=38.7
Q ss_pred CceEEEEEeecCCCcchH-HHHHHHHHHcCCcceeeeEEEEecC-CCCCCccccCCchhhhHHHHh--ccCCCEEEeCCC
Q 007533 294 EPVRIAMVGKYTGLSDAY-LSILKALLHASVDLRKKLVIDWIPA-CDLEDATEKENPDAYKAAWKL--LKGADGILVPGG 369 (599)
Q Consensus 294 ~~v~IaiVGkY~~l~DaY-~SIi~AL~haG~~~~v~v~i~wi~s-~~le~~~~~~~p~~y~~a~~~--L~~~DGIlVPGG 369 (599)
++.+||++- ....+.| ..+++.++.+..+....+.+.| ++ .+.+.+ ....+. -.++||||+.+.
T Consensus 7 ~~~~Ig~i~--~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~-~~~~~~~~~---------~~~~~~l~~~~vdgiI~~~~ 74 (290)
T 3clk_A 7 SSNVIAAVV--SSVRTNFAQQILDGIQEEAHKNGYNLIIVY-SGSADPEEQ---------KHALLTAIERPVMGILLLSI 74 (290)
T ss_dssp -CCEEEEEC--CCCSSSHHHHHHHHHHHHHHTTTCEEEEEC--------------------CHHHHHHSSCCSEEEEESC
T ss_pred cCCEEEEEe--CCCCChHHHHHHHHHHHHHHHcCCeEEEEe-CCCCCHHHH---------HHHHHHHHhcCCCEEEEecc
Confidence 456899983 2344444 4566666555444444433331 22 111110 011122 268999999774
Q ss_pred CCCCchhHHHHHHHHHHHcCCCEEEEe
Q 007533 370 FGNRGVQGKILAAKYAREHRIPYLGIC 396 (599)
Q Consensus 370 fG~rg~eg~i~aik~are~~iP~LGIC 396 (599)
..+. ..++.+.+.++|+.-+-
T Consensus 75 ~~~~------~~~~~l~~~~iPvV~~~ 95 (290)
T 3clk_A 75 ALTD------DNLQLLQSSDVPYCFLS 95 (290)
T ss_dssp C----------CHHHHHCC--CEEEES
T ss_pred cCCH------HHHHHHHhCCCCEEEEc
Confidence 3221 23455566789987653
No 192
>1pvv_A Otcase, ornithine carbamoyltransferase; dodecamer; 1.87A {Pyrococcus furiosus} SCOP: c.78.1.1 c.78.1.1 PDB: 1a1s_A
Probab=43.53 E-value=1.5e+02 Score=30.39 Aligned_cols=157 Identities=17% Similarity=0.162 Sum_probs=89.7
Q ss_pred hHHHHHHHhhhHcCCCCEEEEeeeeeeeecCCCccccCCchhhhhhhhcCCCcccEEEEecCCCCChhhhhccccCCCCC
Q 007533 158 PFIEALGQFSYRVGPGNFCLIHVSLVPVLNVVGEQKTKPTQHSVRGLRGQGLTPNILACRSTVALDDNVKGKLSQFCHVP 237 (599)
Q Consensus 158 pf~ea~rq~~~~~g~~n~~~ihv~~vp~~~~~~e~ktkptq~sv~~Lrs~Gi~pd~iv~R~~~~l~~~~~~Kislfc~v~ 237 (599)
-|--|++|| | .++.++-. +.+.=.|--+...+++-|.+. .|+|++|... ...-+.+|-++.+|
T Consensus 63 SFe~A~~~L----G-g~~i~l~~------~~ss~~kgEsl~DTarvls~~---~D~iviR~~~---~~~~~~lA~~~~vP 125 (315)
T 1pvv_A 63 SFEVAMAHL----G-GHALYLNA------QDLQLRRGETIADTARVLSRY---VDAIMARVYD---HKDVEDLAKYATVP 125 (315)
T ss_dssp HHHHHHHHT----T-SEEEEEEG------GGSTTTTTCCHHHHHHHHTTT---CSEEEEECSS---HHHHHHHHHHCSSC
T ss_pred HHHHHHHHc----C-CeEEEECC------ccccCCCCcCHHHHHHHHHHh---CcEEEEecCc---hHHHHHHHHhCCCC
Confidence 466677775 4 33444321 222223445778888888766 5999999864 56666777777775
Q ss_pred CCCeeeeCCCCCccchhHHHHHHHHHHHHHcCCCCCCCchhhHHHHHHHhhhcCCCCceEEEEEeecCCCcchHHHHHHH
Q 007533 238 EQNIITLYDVPNIWHIPLLLRKAHEAIFKVLNLQGTTKEPLLKEWTSRAEICDGLHEPVRIAMVGKYTGLSDAYLSILKA 317 (599)
Q Consensus 238 ~~~Vi~~~dv~tiy~vPl~L~g~~~~i~~~l~l~~~~~~~~l~~W~~l~~~~~~~~~~v~IaiVGkY~~l~DaY~SIi~A 317 (599)
||+.-| ..+|=...|--++ -|.+++ . .-+.++|++||+. ...-.|.+.+
T Consensus 126 ---VINa~~--~~~HPtQaLaDl~-Ti~e~~---------------------g-~l~gl~va~vGD~---~rva~Sl~~~ 174 (315)
T 1pvv_A 126 ---VINGLS--DFSHPCQALADYM-TIWEKK---------------------G-TIKGVKVVYVGDG---NNVAHSLMIA 174 (315)
T ss_dssp ---EEEEEC--SSCCHHHHHHHHH-HHHHHH---------------------S-CCTTCEEEEESCC---CHHHHHHHHH
T ss_pred ---EEcCCC--CCCCcHHHHHHHH-HHHHHh---------------------C-CcCCcEEEEECCC---cchHHHHHHH
Confidence 788755 3555443331111 011111 1 1246899999985 3356799999
Q ss_pred HHHcCCcceeeeEEEEecCCCCCCcc-cc-----------CCchhhhHHHHhccCCCEEEeCC
Q 007533 318 LLHASVDLRKKLVIDWIPACDLEDAT-EK-----------ENPDAYKAAWKLLKGADGILVPG 368 (599)
Q Consensus 318 L~haG~~~~v~v~i~wi~s~~le~~~-~~-----------~~p~~y~~a~~~L~~~DGIlVPG 368 (599)
+...|+++.+ +.++.++... .. ..-..++...+.++++|-|...-
T Consensus 175 ~~~~g~~v~~------~~P~~~~~~~~~~~~~~~~a~~~g~~~~~~~d~~eav~~aDvvy~~~ 231 (315)
T 1pvv_A 175 GTKLGADVVV------ATPEGYEPDEKVIKWAEQNAAESGGSFELLHDPVKAVKDADVIYTDV 231 (315)
T ss_dssp HHHTTCEEEE------ECCTTCCCCHHHHHHHHHHHHHHTCEEEEESCHHHHTTTCSEEEECC
T ss_pred HHHCCCEEEE------ECCccccCCHHHHHHHHHHHHHcCCeEEEEeCHHHHhCCCCEEEEcc
Confidence 9988887654 4455554321 00 00011233345688999877654
No 193
>3e61_A Putative transcriptional repressor of ribose OPER; structural genomics, DNA-binding, transcripti regulation, PSI-2; 2.00A {Staphylococcus saprophyticus subsp}
Probab=43.53 E-value=45 Score=31.60 Aligned_cols=82 Identities=11% Similarity=0.171 Sum_probs=39.6
Q ss_pred CceEEEEEeecCCCcchHH-HHHHHHHHcCCcceeeeEEEEecCCCCCCccccCCchhhhHHHHhc--cCCCEEEeCCCC
Q 007533 294 EPVRIAMVGKYTGLSDAYL-SILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLL--KGADGILVPGGF 370 (599)
Q Consensus 294 ~~v~IaiVGkY~~l~DaY~-SIi~AL~haG~~~~v~v~i~wi~s~~le~~~~~~~p~~y~~a~~~L--~~~DGIlVPGGf 370 (599)
++.+||++- ....+.|. .+++.++.+..+....+.+ ..+.. +++.-....+.+ .++||||+.+
T Consensus 7 ~~~~Ig~i~--~~~~~~~~~~~~~gi~~~~~~~g~~~~~--~~~~~--------~~~~~~~~~~~l~~~~~dgiIi~~-- 72 (277)
T 3e61_A 7 KSKLIGLLL--PDMSNPFFTLIARGVEDVALAHGYQVLI--GNSDN--------DIKKAQGYLATFVSHNCTGMISTA-- 72 (277)
T ss_dssp ---CEEEEE--SCTTSHHHHHHHHHHHHHHHHTTCCEEE--EECTT--------CHHHHHHHHHHHHHTTCSEEEECG--
T ss_pred CCCEEEEEE--CCCCCHHHHHHHHHHHHHHHHCCCEEEE--EeCCC--------CHHHHHHHHHHHHhCCCCEEEEec--
Confidence 345788883 33444443 4555555544333333333 22221 111111122222 6899999987
Q ss_pred CCCchhHHHHHHH-HHHHcCCCEEEE
Q 007533 371 GNRGVQGKILAAK-YAREHRIPYLGI 395 (599)
Q Consensus 371 G~rg~eg~i~aik-~are~~iP~LGI 395 (599)
. . -..++ .+.+.++|+.-+
T Consensus 73 ~---~---~~~~~~~l~~~~iPvV~~ 92 (277)
T 3e61_A 73 F---N---ENIIENTLTDHHIPFVFI 92 (277)
T ss_dssp G---G---HHHHHHHHHHC-CCEEEG
T ss_pred C---C---hHHHHHHHHcCCCCEEEE
Confidence 1 1 23466 777889998654
No 194
>3tb6_A Arabinose metabolism transcriptional repressor; transcription regulation, arabinose binding, DNA binding Pro; HET: ARB; 2.21A {Bacillus subtilis}
Probab=43.21 E-value=79 Score=30.03 Aligned_cols=88 Identities=16% Similarity=0.165 Sum_probs=44.6
Q ss_pred eEEEEEeecCCCcch-HHHHHHHHHHcCCcceeeeEEEEecCCCCCCccccCCchhhhHHHHh--ccCCCEEEeCCCCCC
Q 007533 296 VRIAMVGKYTGLSDA-YLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKL--LKGADGILVPGGFGN 372 (599)
Q Consensus 296 v~IaiVGkY~~l~Da-Y~SIi~AL~haG~~~~v~v~i~wi~s~~le~~~~~~~p~~y~~a~~~--L~~~DGIlVPGGfG~ 372 (599)
.+||++-. ...+. |..+++.++.+..+....+.+.+.+. + ++.-....+. -.++||||+.+....
T Consensus 16 ~~Igvi~~--~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~-~---------~~~~~~~~~~l~~~~vdgiIi~~~~~~ 83 (298)
T 3tb6_A 16 KTIGVLTT--YISDYIFPSIIRGIESYLSEQGYSMLLTSTNN-N---------PDNERRGLENLLSQHIDGLIVEPTKSA 83 (298)
T ss_dssp CEEEEEES--CSSSTTHHHHHHHHHHHHHHTTCEEEEEECTT-C---------HHHHHHHHHHHHHTCCSEEEECCSSTT
T ss_pred ceEEEEeC--CCCchHHHHHHHHHHHHHHHCCCEEEEEeCCC-C---------hHHHHHHHHHHHHCCCCEEEEeccccc
Confidence 57998843 34444 44566555555444444333333221 1 1111111122 268999999875332
Q ss_pred CchhHHHHHHHHHHHcCCCEEEEe
Q 007533 373 RGVQGKILAAKYAREHRIPYLGIC 396 (599)
Q Consensus 373 rg~eg~i~aik~are~~iP~LGIC 396 (599)
. .......++.+.+.++|+.-+.
T Consensus 84 ~-~~~~~~~~~~~~~~~iPvV~~~ 106 (298)
T 3tb6_A 84 L-QTPNIGYYLNLEKNGIPFAMIN 106 (298)
T ss_dssp S-CCTTHHHHHHHHHTTCCEEEES
T ss_pred c-cCCcHHHHHHHHhcCCCEEEEe
Confidence 1 1112345667778899987653
No 195
>2fn9_A Ribose ABC transporter, periplasmic ribose-bindin; RBP, ribose binding protein, periplasmic binding protein, thermophilic proteins; 1.40A {Thermotoga maritima} PDB: 2fn8_A*
Probab=43.17 E-value=1e+02 Score=29.21 Aligned_cols=33 Identities=30% Similarity=0.424 Sum_probs=21.7
Q ss_pred cCCCEEEeCCCCCCCchhHHHHHHHHHHHcCCCEEEE
Q 007533 359 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGI 395 (599)
Q Consensus 359 ~~~DGIlVPGGfG~rg~eg~i~aik~are~~iP~LGI 395 (599)
.++||||+.+...+ . ....++.+++.++|+.-+
T Consensus 57 ~~vdgiI~~~~~~~-~---~~~~~~~~~~~~iPvV~~ 89 (290)
T 2fn9_A 57 AGYDAIIFNPTDAD-G---SIANVKRAKEAGIPVFCV 89 (290)
T ss_dssp TTCSEEEECCSCTT-T---THHHHHHHHHTTCCEEEE
T ss_pred cCCCEEEEecCChH-H---HHHHHHHHHHCCCeEEEE
Confidence 58999999864322 1 123456677788998654
No 196
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=42.89 E-value=15 Score=35.17 Aligned_cols=32 Identities=34% Similarity=0.442 Sum_probs=24.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~ 39 (599)
|.++||||- +|||+.++ +.|..+|++|...-.
T Consensus 8 k~~lVTGas-~gIG~aia-----~~l~~~G~~V~~~~r 39 (247)
T 2jah_A 8 KVALITGAS-SGIGEATA-----RALAAEGAAVAIAAR 39 (247)
T ss_dssp CEEEEESCS-SHHHHHHH-----HHHHHTTCEEEEEES
T ss_pred CEEEEECCC-CHHHHHHH-----HHHHHCCCEEEEEEC
Confidence 789999985 88887654 567778999877543
No 197
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=42.65 E-value=15 Score=36.21 Aligned_cols=33 Identities=39% Similarity=0.592 Sum_probs=26.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~d 40 (599)
|-|+||||- ||||+.+ .+.|-..|.+|...-+|
T Consensus 3 K~vlVTGas-~GIG~ai-----a~~la~~Ga~V~~~~~~ 35 (247)
T 3ged_A 3 RGVIVTGGG-HGIGKQI-----CLDFLEAGDKVCFIDID 35 (247)
T ss_dssp CEEEEESTT-SHHHHHH-----HHHHHHTTCEEEEEESC
T ss_pred CEEEEecCC-CHHHHHH-----HHHHHHCCCEEEEEeCC
Confidence 789999994 8999854 56788899999876443
No 198
>4ep1_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 3.25A {Bacillus anthracis}
Probab=42.27 E-value=1.2e+02 Score=31.50 Aligned_cols=122 Identities=16% Similarity=0.179 Sum_probs=72.2
Q ss_pred hHHHHHHHhhhHcCCCCEEEEeeeeeeeecCCCccccCCchhhhhhhhcCCCcccEEEEecCCCCChhhhhccccCCCCC
Q 007533 158 PFIEALGQFSYRVGPGNFCLIHVSLVPVLNVVGEQKTKPTQHSVRGLRGQGLTPNILACRSTVALDDNVKGKLSQFCHVP 237 (599)
Q Consensus 158 pf~ea~rq~~~~~g~~n~~~ihv~~vp~~~~~~e~ktkptq~sv~~Lrs~Gi~pd~iv~R~~~~l~~~~~~Kislfc~v~ 237 (599)
-|--|++|| | .+++++-. +.+.-.|--+...+++-|.+. +|+|++|... ...-+.+|-++.||
T Consensus 87 SFE~A~~~L----G-g~vi~l~~------~~ss~~kgEsl~DTarvLs~y---~D~IviR~~~---~~~~~~lA~~~~vP 149 (340)
T 4ep1_A 87 SFEAGMVQL----G-GHGMFLNG------KEMQMGRGETVSDTAKVLSHY---IDGIMIRTFS---HADVEELAKESSIP 149 (340)
T ss_dssp HHHHHHHHT----T-CEEEEEES------CC------CCTTHHHHHHHHH---CSEEEEECSC---HHHHHHHHHHCSSC
T ss_pred HHHHHHHHc----C-CeEEEcCc------ccccCCCCCCHHHHHHHHHHh---CCEEEEecCC---hhHHHHHHHhCCCC
Confidence 466666665 4 34444321 122233445777888888766 7999999864 46667777788886
Q ss_pred CCCeeeeCCCCCccchhHHHHHHHHHHHHHcCCCCCCCchhhHHHHHHHhhhcCCCCceEEEEEeecCCCcchHHHHHHH
Q 007533 238 EQNIITLYDVPNIWHIPLLLRKAHEAIFKVLNLQGTTKEPLLKEWTSRAEICDGLHEPVRIAMVGKYTGLSDAYLSILKA 317 (599)
Q Consensus 238 ~~~Vi~~~dv~tiy~vPl~L~g~~~~i~~~l~l~~~~~~~~l~~W~~l~~~~~~~~~~v~IaiVGkY~~l~DaY~SIi~A 317 (599)
||+.-| + .+|=...|--++ -|.++++ .-+.+|||+||+- ...-.|.+.+
T Consensus 150 ---VINag~-~-~~HPtQaLaDl~-TI~E~~G----------------------~l~glkva~vGD~---~nva~Sl~~~ 198 (340)
T 4ep1_A 150 ---VINGLT-D-DHHPCQALADLM-TIYEETN----------------------TFKGIKLAYVGDG---NNVCHSLLLA 198 (340)
T ss_dssp ---EEEEEC-S-SCCHHHHHHHHH-HHHHHHS----------------------CCTTCEEEEESCC---CHHHHHHHHH
T ss_pred ---EEeCCC-C-CCCcHHHHHHHH-HHHHHhC----------------------CCCCCEEEEECCC---chhHHHHHHH
Confidence 888876 3 555443331111 1112111 1246899999974 3356788999
Q ss_pred HHHcCCccee
Q 007533 318 LLHASVDLRK 327 (599)
Q Consensus 318 L~haG~~~~v 327 (599)
+...|+++.+
T Consensus 199 ~~~~G~~v~~ 208 (340)
T 4ep1_A 199 SAKVGMHMTV 208 (340)
T ss_dssp HHHHTCEEEE
T ss_pred HHHcCCEEEE
Confidence 9888887654
No 199
>1w78_A FOLC bifunctional protein; DHFS, dihydrofolate synthase, synthase, ATP-binding, folate biosynthesis, ligase, multifunctional enzyme; HET: KCX PD8 ADP; 1.82A {Escherichia coli} PDB: 1w7k_A*
Probab=42.19 E-value=25 Score=36.84 Aligned_cols=32 Identities=31% Similarity=0.436 Sum_probs=28.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~ 37 (599)
|.|-|||- =|||.|++=|..+|++.|++|...
T Consensus 50 ~vI~VTGT----nGKtTT~~~l~~iL~~~G~~~g~~ 81 (422)
T 1w78_A 50 FVFTVAGT----NGKGTTCRTLESILMAAGYKVGVY 81 (422)
T ss_dssp EEEEEECS----SCHHHHHHHHHHHHHHTTCCEEEE
T ss_pred cEEEEeCC----cChHHHHHHHHHHHHHCCCCEEEE
Confidence 67888884 699999999999999999998765
No 200
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=42.16 E-value=18 Score=35.41 Aligned_cols=31 Identities=23% Similarity=0.390 Sum_probs=24.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k 38 (599)
|.++||||- +|||+.+ .+.|-.+|++|...=
T Consensus 7 k~~lVTGas-~GIG~ai-----a~~la~~G~~V~~~~ 37 (274)
T 3e03_A 7 KTLFITGAS-RGIGLAI-----ALRAARDGANVAIAA 37 (274)
T ss_dssp CEEEEETTT-SHHHHHH-----HHHHHHTTCEEEEEE
T ss_pred cEEEEECCC-ChHHHHH-----HHHHHHCCCEEEEEe
Confidence 789999997 8888755 466777899887753
No 201
>4f67_A UPF0176 protein LPG2838; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium; 1.79A {Legionella pneumophila subsp}
Probab=42.11 E-value=15 Score=36.85 Aligned_cols=62 Identities=27% Similarity=0.436 Sum_probs=43.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCC-eeEEee--ecccccCCCCCCCccccceEEEccCCccccCCC
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGL-RVTCIK--IDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDL 71 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~-~v~~~k--~dpyln~d~gtmsp~~hgevfv~~dg~e~dldl 71 (599)
++|+.+.| |+.|+....+|+..|| +|..++ +.-|..-=+.. .+.-.|++||-|+=--++-+|
T Consensus 183 ~IVvyC~~-------G~RS~~Aa~~L~~~Gf~nV~~L~GGi~aW~~~~~~~-~~~w~G~~fVFD~R~~~~~~l 247 (265)
T 4f67_A 183 KIAMFCTG-------GIRCEKTTAYMKELGFEHVYQLHDGILNYLESIPES-ESLWEGKCFVFDDRVAVDQKL 247 (265)
T ss_dssp CEEEECSS-------SHHHHHHHHHHHHHTCSSEEEETTHHHHHHHHSCTT-TCCEEECEECSSTTCEECTTS
T ss_pred eEEEEeCC-------ChHHHHHHHHHHHcCCCCEEEecCHHHHHHHhcCcc-cccccCcceeEcCccccccCH
Confidence 45666653 6778888899999999 587765 44444321122 345679999999988887776
No 202
>2f00_A UDP-N-acetylmuramate--L-alanine ligase; amide bond ligase, ATPase, bacterial cell WALL; 2.50A {Escherichia coli}
Probab=42.05 E-value=26 Score=37.68 Aligned_cols=57 Identities=19% Similarity=0.332 Sum_probs=39.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccccCCCCCCCccccceEEEccCC
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNTDAGTMSPFEHGEVFVLDDG 64 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~dpyln~d~gtmsp~~hgevfv~~dg 64 (599)
|.|-||| +=||+.|++=|+.+|++.|++.+. ++.--+| +.|...-.+..+++|++=|
T Consensus 120 ~vI~VTG----TnGKTTTt~ml~~iL~~~G~~p~~-~igg~~~-~~~~~~~~~~~d~~VlE~~ 176 (491)
T 2f00_A 120 HGIAIAG----THGKTTTTAMVSSIYAEAGLDPTF-VNGGLVK-AAGVHARLGHGRYLIAEAD 176 (491)
T ss_dssp EEEEEES----SSCHHHHHHHHHHHHHHTTCCCEE-EEEEEET-TTTEEEECCSSSEEEEECC
T ss_pred CEEEEEC----CCCHHHHHHHHHHHHHhCCCCCEE-EECCeec-cccccccCCCCCEEEEEeC
Confidence 6788888 469999999999999999998542 3333333 3332111234588888876
No 203
>3kjx_A Transcriptional regulator, LACI family; LACL family, protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.33A {Silicibacter pomeroyi}
Probab=41.93 E-value=97 Score=30.64 Aligned_cols=84 Identities=15% Similarity=0.155 Sum_probs=46.3
Q ss_pred CceEEEEEeecCCCcch-HHHHHHHHHHcCCcceeeeEEEEecCCCCCCccccCCchhhhHHHHh--ccCCCEEEeCCCC
Q 007533 294 EPVRIAMVGKYTGLSDA-YLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKL--LKGADGILVPGGF 370 (599)
Q Consensus 294 ~~v~IaiVGkY~~l~Da-Y~SIi~AL~haG~~~~v~v~i~wi~s~~le~~~~~~~p~~y~~a~~~--L~~~DGIlVPGGf 370 (599)
++.+||++= ..+.+. |..+++.++.+..+....+.+...+. +++.-....+. -.++||||+.+..
T Consensus 67 ~~~~Ig~i~--~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~----------~~~~~~~~i~~l~~~~vdGiIi~~~~ 134 (344)
T 3kjx_A 67 RVNLVAVII--PSLSNMVFPEVLTGINQVLEDTELQPVVGVTDY----------LPEKEEKVLYEMLSWRPSGVIIAGLE 134 (344)
T ss_dssp CCSEEEEEE--SCSSSSSHHHHHHHHHHHHTSSSSEEEEEECTT----------CHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred CCCEEEEEe--CCCCcHHHHHHHHHHHHHHHHCCCEEEEEeCCC----------CHHHHHHHHHHHHhCCCCEEEEECCC
Confidence 356899883 333334 45677777776666555443332221 11111112222 2579999998633
Q ss_pred CCCchhHHHHHHHHHHHcCCCEEEE
Q 007533 371 GNRGVQGKILAAKYAREHRIPYLGI 395 (599)
Q Consensus 371 G~rg~eg~i~aik~are~~iP~LGI 395 (599)
.+ . ..++.+.+.++|+.-+
T Consensus 135 ~~---~---~~~~~l~~~~iPvV~i 153 (344)
T 3kjx_A 135 HS---E---AARAMLDAAGIPVVEI 153 (344)
T ss_dssp CC---H---HHHHHHHHCSSCEEEE
T ss_pred CC---H---HHHHHHHhCCCCEEEE
Confidence 21 1 3456677789998765
No 204
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=41.88 E-value=18 Score=34.95 Aligned_cols=32 Identities=25% Similarity=0.198 Sum_probs=24.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~ 39 (599)
|.++||||- ||||+. +.+.|-.+|++|...-.
T Consensus 8 k~vlVTGas-~GIG~a-----ia~~l~~~G~~V~~~~r 39 (252)
T 3h7a_A 8 ATVAVIGAG-DYIGAE-----IAKKFAAEGFTVFAGRR 39 (252)
T ss_dssp CEEEEECCS-SHHHHH-----HHHHHHHTTCEEEEEES
T ss_pred CEEEEECCC-chHHHH-----HHHHHHHCCCEEEEEeC
Confidence 789999996 788864 45667778999887643
No 205
>2gk3_A Putative cytoplasmic protein; STM3548, structural genomics, PSI, P structure initiative; 2.25A {Salmonella typhimurium} SCOP: c.23.16.9
Probab=41.87 E-value=14 Score=36.41 Aligned_cols=71 Identities=20% Similarity=0.105 Sum_probs=42.4
Q ss_pred HHHHHHHHHHcCCcceeeeEEEEecCCCCCCccccCCchhhhHHHHhccCCCEEEeCCCCCC------------CchhHH
Q 007533 311 YLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGN------------RGVQGK 378 (599)
Q Consensus 311 Y~SIi~AL~haG~~~~v~v~i~wi~s~~le~~~~~~~p~~y~~a~~~L~~~DGIlVPGGfG~------------rg~eg~ 378 (599)
...+.++|+.+++.+.. +...+ .++.|....+.|.++|.||+.+-... +..+..
T Consensus 42 ~~~l~~aL~~~~~~v~~------~~~~~--------~~~~fp~~~~~L~~yDvIIl~~~~~~~l~~~~~~~~~~~~~~~~ 107 (256)
T 2gk3_A 42 ATWLLECLRKGGVDIDY------MPAHT--------VQIAFPESIDELNRYDVIVISDIGSNTFLLQNETFYQLKIKPNA 107 (256)
T ss_dssp CHHHHHHHHHTTCEEEE------ECHHH--------HHHCCCCSHHHHHTCSEEEEESCCHHHHHSCHHHHTTCCCCCCH
T ss_pred HHHHHHHHHhcCceEEE------Eeccc--------chhhCCcChhHHhcCCEEEEeCCchhhcccccccccccccChHH
Confidence 34688899987765533 32110 00001001146899999999984321 011345
Q ss_pred HHHHHHHHHcCCCEEEE
Q 007533 379 ILAAKYAREHRIPYLGI 395 (599)
Q Consensus 379 i~aik~are~~iP~LGI 395 (599)
..+++...+++..+++|
T Consensus 108 ~~~l~~~V~~GGgll~i 124 (256)
T 2gk3_A 108 LESIKEYVKNGGGLLMI 124 (256)
T ss_dssp HHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHhCCEEEEE
Confidence 67788887889999999
No 206
>3huu_A Transcription regulator like protein; PSI-II, NYSGXRC, LAC I, STR genomics, protein structure initiative; 1.95A {Staphylococcus haemolyticus}
Probab=41.70 E-value=53 Score=31.81 Aligned_cols=31 Identities=23% Similarity=0.446 Sum_probs=21.3
Q ss_pred cCCCEEEeCCCCCCCchhHHHHHHHHHHHcCCCEEEE
Q 007533 359 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGI 395 (599)
Q Consensus 359 ~~~DGIlVPGGfG~rg~eg~i~aik~are~~iP~LGI 395 (599)
.++||||+.+...+. ..++.+.+.++|+.-+
T Consensus 82 ~~vdgiIi~~~~~~~------~~~~~l~~~~iPvV~i 112 (305)
T 3huu_A 82 KSVDGFILLYSLKDD------PIEHLLNEFKVPYLIV 112 (305)
T ss_dssp TCCSEEEESSCBTTC------HHHHHHHHTTCCEEEE
T ss_pred CCCCEEEEeCCcCCc------HHHHHHHHcCCCEEEE
Confidence 689999998743321 3456667788997655
No 207
>1j6u_A UDP-N-acetylmuramate-alanine ligase MURC; structural genomics, TM0231, JCSG, PSI, protein structure initiative; 2.30A {Thermotoga maritima} SCOP: c.5.1.1 c.59.1.1 c.72.2.1
Probab=41.67 E-value=33 Score=36.73 Aligned_cols=38 Identities=24% Similarity=0.215 Sum_probs=31.2
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccccc
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLN 44 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~dpyln 44 (599)
|.|-||| +=||+.|++=|+.+|++.|++++. .+-|.+|
T Consensus 115 ~vI~VTG----TnGKTTTt~ml~~iL~~~G~~~~~-~~~g~~~ 152 (469)
T 1j6u_A 115 EEFAVTG----TDGKTTTTAMVAHVLKHLRKSPTV-FLGGIMD 152 (469)
T ss_dssp CEEEEEC----SSSHHHHHHHHHHHHHHTTCCCEE-ECSSCCT
T ss_pred CEEEEEC----CCCHHHHHHHHHHHHHHcCCCceE-EECCeec
Confidence 5788888 469999999999999999999853 4566654
No 208
>3egc_A Putative ribose operon repressor; structural genomics, unknown function, DNA-binding, transcri transcription regulation, PSI-2; 2.35A {Burkholderia thailandensis}
Probab=41.66 E-value=39 Score=32.46 Aligned_cols=84 Identities=7% Similarity=0.164 Sum_probs=42.0
Q ss_pred CceEEEEEeecCCCcchHH-HHHHHHHHcCCcceeeeEEEEecCCCCCCccccCCchhhhHHHHhc--cCCCEEEeCCCC
Q 007533 294 EPVRIAMVGKYTGLSDAYL-SILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLL--KGADGILVPGGF 370 (599)
Q Consensus 294 ~~v~IaiVGkY~~l~DaY~-SIi~AL~haG~~~~v~v~i~wi~s~~le~~~~~~~p~~y~~a~~~L--~~~DGIlVPGGf 370 (599)
++.+||++- ....+.|. .+++.++.+..+....+.+.+.+. + ++.-....+.+ .++||||+.+..
T Consensus 7 ~~~~Igvv~--~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~-~---------~~~~~~~~~~l~~~~vdgiIi~~~~ 74 (291)
T 3egc_A 7 RSNVVGLIV--SDIENVFFAEVASGVESEARHKGYSVLLANTAE-D---------IVREREAVGQFFERRVDGLILAPSE 74 (291)
T ss_dssp CCCEEEEEE--SCTTSHHHHHHHHHHHHHHHHTTCEEEEEECTT-C---------HHHHHHHHHHHHHTTCSEEEECCCS
T ss_pred CCcEEEEEE--CCCcchHHHHHHHHHHHHHHHCCCEEEEEeCCC-C---------HHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 456899883 33444443 455555555444444333333221 1 11111122222 689999998854
Q ss_pred CCCchhHHHHHHHHHHHcCCCEEEE
Q 007533 371 GNRGVQGKILAAKYAREHRIPYLGI 395 (599)
Q Consensus 371 G~rg~eg~i~aik~are~~iP~LGI 395 (599)
... ..++.+.+.++|+.-+
T Consensus 75 ~~~------~~~~~~~~~~iPvV~~ 93 (291)
T 3egc_A 75 GEH------DYLRTELPKTFPIVAV 93 (291)
T ss_dssp SCC------HHHHHSSCTTSCEEEE
T ss_pred CCh------HHHHHhhccCCCEEEE
Confidence 311 2344555667777544
No 209
>3m9w_A D-xylose-binding periplasmic protein; xylose binding protein, conformational changes, SUGA protein; 2.15A {Escherichia coli} PDB: 3m9x_A* 3ma0_A*
Probab=41.62 E-value=81 Score=30.56 Aligned_cols=33 Identities=21% Similarity=0.190 Sum_probs=22.3
Q ss_pred cCCCEEEeCCCCCCCchhHHHHHHHHHHHcCCCEEEE
Q 007533 359 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGI 395 (599)
Q Consensus 359 ~~~DGIlVPGGfG~rg~eg~i~aik~are~~iP~LGI 395 (599)
.++||||+.+...+. ....++.+++.++|+.-+
T Consensus 57 ~~vdgiIi~~~~~~~----~~~~~~~~~~~~iPvV~~ 89 (313)
T 3m9w_A 57 RGVDVLVIIPYNGQV----LSNVVKEAKQEGIKVLAY 89 (313)
T ss_dssp TTCSEEEEECSSTTS----CHHHHHHHHTTTCEEEEE
T ss_pred cCCCEEEEeCCChhh----hHHHHHHHHHCCCeEEEE
Confidence 689999998743221 124566777888998654
No 210
>3g1w_A Sugar ABC transporter; sugar-binding protein, bacillus halod target 11229F, transport protein, structural genomics; 2.02A {Bacillus halodurans c-125}
Probab=41.48 E-value=1e+02 Score=29.52 Aligned_cols=86 Identities=14% Similarity=0.004 Sum_probs=43.8
Q ss_pred ceEEEEEeecCCCcch-HHHHHHHHHHcCCcceeeeEEEEecCCCCCCccccCCchhhhHHHHh--ccCCCEEEeCCCCC
Q 007533 295 PVRIAMVGKYTGLSDA-YLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKL--LKGADGILVPGGFG 371 (599)
Q Consensus 295 ~v~IaiVGkY~~l~Da-Y~SIi~AL~haG~~~~v~v~i~wi~s~~le~~~~~~~p~~y~~a~~~--L~~~DGIlVPGGfG 371 (599)
..+|+++-.. ..+. |..+++.++.+..+....+.+.. .+. - +++...+..+. -.++||||+.+...
T Consensus 4 ~~~I~~i~~~--~~~~~~~~~~~gi~~~a~~~g~~~~~~~-~~~-~-------~~~~~~~~i~~l~~~~vdgiIi~~~~~ 72 (305)
T 3g1w_A 4 NETYMMITFQ--SGMDYWKRCLKGFEDAAQALNVTVEYRG-AAQ-Y-------DIQEQITVLEQAIAKNPAGIAISAIDP 72 (305)
T ss_dssp -CEEEEEESS--TTSTHHHHHHHHHHHHHHHHTCEEEEEE-CSS-S-------CHHHHHHHHHHHHHHCCSEEEECCSST
T ss_pred CceEEEEEcc--CCChHHHHHHHHHHHHHHHcCCEEEEeC-CCc-C-------CHHHHHHHHHHHHHhCCCEEEEcCCCH
Confidence 4578888533 3334 44566666555444444333222 221 1 11111122222 25899999987432
Q ss_pred CCchhHHHHHHHHHHHcCCCEEEE
Q 007533 372 NRGVQGKILAAKYAREHRIPYLGI 395 (599)
Q Consensus 372 ~rg~eg~i~aik~are~~iP~LGI 395 (599)
. . ....++.+.+.++|+.-+
T Consensus 73 ~-~---~~~~~~~~~~~~iPvV~~ 92 (305)
T 3g1w_A 73 V-E---LTDTINKAVDAGIPIVLF 92 (305)
T ss_dssp T-T---THHHHHHHHHTTCCEEEE
T ss_pred H-H---HHHHHHHHHHCCCcEEEE
Confidence 2 1 224566777789998654
No 211
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=41.12 E-value=16 Score=34.63 Aligned_cols=32 Identities=28% Similarity=0.441 Sum_probs=24.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~ 39 (599)
|.++||||- +|||+.+ .+.|-.+|++|...=.
T Consensus 15 k~vlITGas-~gIG~~i-----a~~l~~~G~~V~~~~r 46 (247)
T 3i1j_A 15 RVILVTGAA-RGIGAAA-----ARAYAAHGASVVLLGR 46 (247)
T ss_dssp CEEEESSTT-SHHHHHH-----HHHHHHTTCEEEEEES
T ss_pred CEEEEeCCC-ChHHHHH-----HHHHHHCCCEEEEEec
Confidence 789999995 8888754 4667788999877543
No 212
>3d8u_A PURR transcriptional regulator; APC91343.1, vibrio parahaem RIMD 2210633, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.88A {Vibrio parahaemolyticus}
Probab=40.94 E-value=62 Score=30.51 Aligned_cols=31 Identities=19% Similarity=0.275 Sum_probs=21.0
Q ss_pred cCCCEEEeCCCCCCCchhHHHHHHHHHHHcCCCEEEE
Q 007533 359 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGI 395 (599)
Q Consensus 359 ~~~DGIlVPGGfG~rg~eg~i~aik~are~~iP~LGI 395 (599)
.++||||+.+.... + ..++.+.+.++|+.-+
T Consensus 58 ~~vdgii~~~~~~~---~---~~~~~l~~~~iPvV~~ 88 (275)
T 3d8u_A 58 SRPAGVVLFGSEHS---Q---RTHQLLEASNTPVLEI 88 (275)
T ss_dssp SCCCCEEEESSCCC---H---HHHHHHHHHTCCEEEE
T ss_pred cCCCEEEEeCCCCC---H---HHHHHHHhCCCCEEEE
Confidence 68999999774322 1 3455666779998765
No 213
>3o1i_D Periplasmic protein TORT; ligand free, two component sensor, periplasmic binding prote signaling protein; HET: PE4; 2.80A {Vibrio parahaemolyticus} PDB: 3o1h_B* 3o1j_C
Probab=40.91 E-value=67 Score=30.71 Aligned_cols=87 Identities=16% Similarity=0.144 Sum_probs=44.2
Q ss_pred CceEEEEEeecCCCcchHH-HHHHHHHHcCCcceeeeEEEEecCCCCCCccccCCchhhhHHHHh--ccCCCEEEeCCCC
Q 007533 294 EPVRIAMVGKYTGLSDAYL-SILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKL--LKGADGILVPGGF 370 (599)
Q Consensus 294 ~~v~IaiVGkY~~l~DaY~-SIi~AL~haG~~~~v~v~i~wi~s~~le~~~~~~~p~~y~~a~~~--L~~~DGIlVPGGf 370 (599)
++.+||++- ....+.|. .+++.++.+..+....+.+ .++.... +++...+..+. -.++||||+.+..
T Consensus 4 ~~~~Igvi~--~~~~~~~~~~~~~g~~~~a~~~g~~~~~--~~~~~~~------~~~~~~~~~~~~~~~~vdgiii~~~~ 73 (304)
T 3o1i_D 4 SDEKICAIY--PHLKDSYWLSVNYGMVSEAEKQGVNLRV--LEAGGYP------NKSRQEQQLALCTQWGANAIILGTVD 73 (304)
T ss_dssp -CCEEEEEE--SCSCSHHHHHHHHHHHHHHHHHTCEEEE--EECSSTT------CHHHHHHHHHHHHHHTCSEEEECCSS
T ss_pred CCcEEEEEe--CCCCCcHHHHHHHHHHHHHHHcCCeEEE--EcCCCCC------CHHHHHHHHHHHHHcCCCEEEEeCCC
Confidence 457899983 34445544 5666666555444443333 3332210 11111111222 2589999998743
Q ss_pred CCCchhHHHHHHHHHHHcCCCEEEE
Q 007533 371 GNRGVQGKILAAKYAREHRIPYLGI 395 (599)
Q Consensus 371 G~rg~eg~i~aik~are~~iP~LGI 395 (599)
.. ... ..++.+. .++|+.-+
T Consensus 74 ~~-~~~---~~~~~~~-~~iPvV~~ 93 (304)
T 3o1i_D 74 PH-AYE---HNLKSWV-GNTPVFAT 93 (304)
T ss_dssp TT-SST---TTHHHHT-TTSCEEEC
T ss_pred hh-HHH---HHHHHHc-CCCCEEEe
Confidence 32 111 1245566 79998766
No 214
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=40.72 E-value=16 Score=35.56 Aligned_cols=32 Identities=28% Similarity=0.397 Sum_probs=24.2
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~ 39 (599)
|.|+||||- +|||+.+ .+.|..+|++|...=.
T Consensus 13 k~vlITGas-~GIG~~~-----a~~L~~~G~~V~~~~r 44 (311)
T 3o26_A 13 RCAVVTGGN-KGIGFEI-----CKQLSSNGIMVVLTCR 44 (311)
T ss_dssp CEEEESSCS-SHHHHHH-----HHHHHHTTCEEEEEES
T ss_pred cEEEEecCC-chHHHHH-----HHHHHHCCCEEEEEeC
Confidence 689999997 8888854 4556678998876533
No 215
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}
Probab=40.50 E-value=18 Score=35.29 Aligned_cols=33 Identities=39% Similarity=0.599 Sum_probs=25.2
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~d 40 (599)
|-|+||||- +|||+.+ .+.|..+|.+|...-.+
T Consensus 15 k~vlVTGas-~GIG~ai-----a~~l~~~G~~V~~~~r~ 47 (269)
T 3vtz_A 15 KVAIVTGGS-SGIGLAV-----VDALVRYGAKVVSVSLD 47 (269)
T ss_dssp CEEEESSTT-SHHHHHH-----HHHHHHTTCEEEEEESC
T ss_pred CEEEEeCCC-CHHHHHH-----HHHHHHCCCEEEEEeCC
Confidence 789999986 7888754 45677889999876443
No 216
>1jbw_A Folylpolyglutamate synthase; FPGS folate AMPPCP ternary complex, ligase; HET: KCX ACQ TMF; 1.85A {Lactobacillus casei} SCOP: c.59.1.2 c.72.2.2 PDB: 1fgs_A* 1jbv_A* 2gca_A 2gc5_A* 2gc6_A* 2gcb_A
Probab=40.49 E-value=25 Score=36.99 Aligned_cols=32 Identities=44% Similarity=0.657 Sum_probs=28.2
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~ 37 (599)
|.|-|||- =|||.|++=|..+|++.|++|...
T Consensus 40 ~vI~VtGT----nGKtTT~~~l~~iL~~~G~~vg~~ 71 (428)
T 1jbw_A 40 RYIHVTGT----NGKGSAANAIAHVLEASGLTVGLY 71 (428)
T ss_dssp CEEEEECS----SCHHHHHHHHHHHHHHTTCCEEEE
T ss_pred cEEEEECC----CChHHHHHHHHHHHHHCCCCEEEE
Confidence 57888884 699999999999999999998754
No 217
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Probab=40.37 E-value=17 Score=35.66 Aligned_cols=30 Identities=40% Similarity=0.619 Sum_probs=23.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~ 37 (599)
|.++||||- +|||+.+ .+.|..+|++|...
T Consensus 6 k~~lVTGas-~GIG~ai-----a~~la~~G~~V~~~ 35 (281)
T 3zv4_A 6 EVALITGGA-SGLGRAL-----VDRFVAEGARVAVL 35 (281)
T ss_dssp CEEEEETCS-SHHHHHH-----HHHHHHTTCEEEEE
T ss_pred CEEEEECCC-cHHHHHH-----HHHHHHCcCEEEEE
Confidence 789999986 7888754 46677889998874
No 218
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=40.06 E-value=20 Score=34.40 Aligned_cols=32 Identities=31% Similarity=0.528 Sum_probs=24.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~ 39 (599)
|.++||||- +|||+. +.+.|-.+|++|...-.
T Consensus 8 k~~lVTGas-~gIG~a-----ia~~l~~~G~~V~~~~r 39 (257)
T 3tpc_A 8 RVFIVTGAS-SGLGAA-----VTRMLAQEGATVLGLDL 39 (257)
T ss_dssp CEEEEESTT-SHHHHH-----HHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCC-CHHHHH-----HHHHHHHCCCEEEEEeC
Confidence 789999995 777765 45667788999987643
No 219
>3afo_A NADH kinase POS5; alpha/beta+BETA sandwich, ATP-binding, mitochondrion NADP, nucleotide-binding, transferase, transit peptide; HET: NAI; 2.00A {Saccharomyces cerevisiae}
Probab=39.73 E-value=13 Score=39.40 Aligned_cols=36 Identities=22% Similarity=0.417 Sum_probs=27.7
Q ss_pred ccCCCEEEeCCCCCCCchhHHHHHHHHHHHcCC-CEEEEehh
Q 007533 358 LKGADGILVPGGFGNRGVQGKILAAKYAREHRI-PYLGICLG 398 (599)
Q Consensus 358 L~~~DGIlVPGGfG~rg~eg~i~aik~are~~i-P~LGICLG 398 (599)
..++|.||+-||-|+ ++.+++.+...++ |+|||=+|
T Consensus 112 ~~~~DlVIvlGGDGT-----lL~aa~~~~~~~vpPiLGIN~G 148 (388)
T 3afo_A 112 VNRTDLLVTLGGDGT-----ILHGVSMFGNTQVPPVLAFALG 148 (388)
T ss_dssp HHHCSEEEEEESHHH-----HHHHHHTTTTSCCCCEEEEECS
T ss_pred ccCCCEEEEEeCcHH-----HHHHHHHhcccCCCeEEEEECC
Confidence 356899999998552 5667777766678 89999877
No 220
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=39.66 E-value=18 Score=35.04 Aligned_cols=32 Identities=34% Similarity=0.422 Sum_probs=24.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~ 39 (599)
|.++||||- +|||+.+ .+.|-.+|++|...-.
T Consensus 9 k~~lVTGas-~GIG~ai-----a~~l~~~G~~V~~~~r 40 (265)
T 3lf2_A 9 AVAVVTGGS-SGIGLAT-----VELLLEAGAAVAFCAR 40 (265)
T ss_dssp CEEEEETCS-SHHHHHH-----HHHHHHTTCEEEEEES
T ss_pred CEEEEeCCC-ChHHHHH-----HHHHHHCCCEEEEEeC
Confidence 689999985 7888754 4667778998876543
No 221
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=39.66 E-value=17 Score=35.36 Aligned_cols=32 Identities=38% Similarity=0.446 Sum_probs=24.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~ 39 (599)
|-++||||- +|||+.+ .+.|-.+|++|...-.
T Consensus 11 k~~lVTGas-~gIG~ai-----a~~l~~~G~~V~~~~r 42 (267)
T 3t4x_A 11 KTALVTGST-AGIGKAI-----ATSLVAEGANVLINGR 42 (267)
T ss_dssp CEEEETTCS-SHHHHHH-----HHHHHHTTCEEEEEES
T ss_pred CEEEEeCCC-cHHHHHH-----HHHHHHCCCEEEEEeC
Confidence 679999985 7888754 4667788999887543
No 222
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Probab=39.22 E-value=19 Score=35.23 Aligned_cols=31 Identities=29% Similarity=0.480 Sum_probs=24.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k 38 (599)
|.++||||- +|||+. +.+.|..+|++|...-
T Consensus 17 k~vlVTGas-~gIG~a-----ia~~l~~~G~~V~~~~ 47 (266)
T 3p19_A 17 KLVVITGAS-SGIGEA-----IARRFSEEGHPLLLLA 47 (266)
T ss_dssp CEEEEESTT-SHHHHH-----HHHHHHHTTCCEEEEE
T ss_pred CEEEEECCC-CHHHHH-----HHHHHHHCCCEEEEEE
Confidence 789999995 788875 4567778899988754
No 223
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=39.00 E-value=18 Score=34.84 Aligned_cols=30 Identities=43% Similarity=0.554 Sum_probs=23.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~ 37 (599)
|-++||||- +|||+. +.+.|..+|++|...
T Consensus 7 k~vlVTGas-~gIG~a-----~a~~l~~~G~~V~~~ 36 (247)
T 3rwb_A 7 KTALVTGAA-QGIGKA-----IAARLAADGATVIVS 36 (247)
T ss_dssp CEEEEETTT-SHHHHH-----HHHHHHHTTCEEEEE
T ss_pred CEEEEECCC-CHHHHH-----HHHHHHHCCCEEEEE
Confidence 789999985 778774 456777889998874
No 224
>4e5v_A Putative THUA-like protein; THUA-like proteins, trehalose utilisation, structural genomi center for structural genomics, JCSG; 1.75A {Parabacteroides merdae}
Probab=38.99 E-value=1e+02 Score=30.82 Aligned_cols=89 Identities=4% Similarity=-0.056 Sum_probs=51.5
Q ss_pred CceEEEEEeecCCCcchHH----HHHHHHHHcC-CcceeeeEEEEecCCCCCCccccCCchhhhHHHHhccCCCEEEeCC
Q 007533 294 EPVRIAMVGKYTGLSDAYL----SILKALLHAS-VDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPG 368 (599)
Q Consensus 294 ~~v~IaiVGkY~~l~DaY~----SIi~AL~haG-~~~~v~v~i~wi~s~~le~~~~~~~p~~y~~a~~~L~~~DGIlVPG 368 (599)
++.||.|++.-.. +| +. .+.+.|+..| +++.+. . +.... ++++.|. +.|+++|.||+.-
T Consensus 3 ~~~kvLiv~G~~~-H~-~~~~~~~l~~~l~~~g~f~V~~~----~-d~~~~------~d~~~f~---~~L~~~D~vV~~~ 66 (281)
T 4e5v_A 3 KPIKTLLITGQNN-HN-WQVSHVVLKQILENSGRFDVDFV----I-SPEQG------KDMSGFV---LDFSPYQLVVLDY 66 (281)
T ss_dssp CCEEEEEEESCCS-SC-HHHHHHHHHHHHHHTTSEEEEEE----E-CCCTT------SCCTTCC---CCCTTCSEEEECC
T ss_pred CceEEEEEcCCCC-CC-hHHHHHHHHHHHHhcCCEEEEEE----e-CCccc------cchhHHh---hhhhcCCEEEEeC
Confidence 4678998876443 34 33 4555666666 655442 1 11100 1111221 2589999999644
Q ss_pred CCCCCchhHHHHHHHHHHHcCCCEEEEehhH
Q 007533 369 GFGNRGVQGKILAAKYAREHRIPYLGICLGM 399 (599)
Q Consensus 369 GfG~rg~eg~i~aik~are~~iP~LGICLGm 399 (599)
-+..-.+...++++...+++.+++|+.-+.
T Consensus 67 -~~~~l~~~~~~~l~~yV~~Ggglv~~H~a~ 96 (281)
T 4e5v_A 67 -NGDSWPEETNRRFLEYVQNGGGVVIYHAAD 96 (281)
T ss_dssp -CSSCCCHHHHHHHHHHHHTTCEEEEEGGGG
T ss_pred -CCCcCCHHHHHHHHHHHHcCCCEEEEeccc
Confidence 233333455667777778899999998643
No 225
>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*
Probab=38.98 E-value=23 Score=34.05 Aligned_cols=31 Identities=29% Similarity=0.409 Sum_probs=23.9
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k 38 (599)
|-++||||- +|||+.+ .+.|..+|++|...-
T Consensus 1 k~vlVTGas-~gIG~ai-----a~~l~~~G~~V~~~~ 31 (248)
T 3asu_A 1 MIVLVTGAT-AGFGECI-----TRRFIQQGHKVIATG 31 (248)
T ss_dssp CEEEETTTT-STTHHHH-----HHHHHHTTCEEEEEE
T ss_pred CEEEEECCC-ChHHHHH-----HHHHHHCCCEEEEEe
Confidence 568999984 8999865 456777899988753
No 226
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=38.97 E-value=21 Score=35.21 Aligned_cols=32 Identities=34% Similarity=0.552 Sum_probs=24.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~ 39 (599)
|.++||||- +|||+. +.+.|..+|++|...-.
T Consensus 30 k~vlVTGas-~gIG~a-----ia~~la~~G~~V~~~~r 61 (277)
T 3gvc_A 30 KVAIVTGAG-AGIGLA-----VARRLADEGCHVLCADI 61 (277)
T ss_dssp CEEEETTTT-STHHHH-----HHHHHHHTTCEEEEEES
T ss_pred CEEEEECCC-cHHHHH-----HHHHHHHCCCEEEEEeC
Confidence 679999986 888875 44567778999887643
No 227
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=38.93 E-value=30 Score=32.43 Aligned_cols=34 Identities=32% Similarity=0.491 Sum_probs=24.6
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 007533 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (599)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~d 40 (599)
||-|+||||- ++||+-+ .+.|..+|++|..+-.+
T Consensus 1 Mk~vlVtGas-g~iG~~l-----~~~L~~~g~~V~~~~r~ 34 (255)
T 2dkn_A 1 MSVIAITGSA-SGIGAAL-----KELLARAGHTVIGIDRG 34 (255)
T ss_dssp -CEEEEETTT-SHHHHHH-----HHHHHHTTCEEEEEESS
T ss_pred CcEEEEeCCC-cHHHHHH-----HHHHHhCCCEEEEEeCC
Confidence 7889999985 6677655 45566789999887544
No 228
>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A
Probab=38.86 E-value=23 Score=33.62 Aligned_cols=33 Identities=39% Similarity=0.597 Sum_probs=25.0
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~d 40 (599)
|-++||||- +|||+. +.+.|..+|++|...-.+
T Consensus 3 k~vlVTGas-~giG~~-----~a~~l~~~G~~V~~~~r~ 35 (239)
T 2ekp_A 3 RKALVTGGS-RGIGRA-----IAEALVARGYRVAIASRN 35 (239)
T ss_dssp CEEEEETTT-SHHHHH-----HHHHHHHTTCEEEEEESS
T ss_pred CEEEEeCCC-cHHHHH-----HHHHHHHCCCEEEEEeCC
Confidence 789999985 777764 456677889999876544
No 229
>3sho_A Transcriptional regulator, RPIR family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.80A {Sphaerobacter thermophilus}
Probab=38.79 E-value=1.7e+02 Score=26.25 Aligned_cols=93 Identities=11% Similarity=0.051 Sum_probs=52.4
Q ss_pred HHHHHHHhhhcCCCCceEEEEEeecCCCcchHH---HHHHHHHHcCCcceeeeEEEEecCCCCCCccccCCchhhhHHHH
Q 007533 280 KEWTSRAEICDGLHEPVRIAMVGKYTGLSDAYL---SILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWK 356 (599)
Q Consensus 280 ~~W~~l~~~~~~~~~~v~IaiVGkY~~l~DaY~---SIi~AL~haG~~~~v~v~i~wi~s~~le~~~~~~~p~~y~~a~~ 356 (599)
..+.++++.+.+. -+|-++| .+. ++. .....|.+.|..+.. ++.. +..+.....
T Consensus 27 ~~l~~~~~~i~~a---~~I~i~G-~G~---S~~~a~~~~~~l~~~g~~~~~------~~~~----------~~~~~~~~~ 83 (187)
T 3sho_A 27 EAIEAAVEAICRA---DHVIVVG-MGF---SAAVAVFLGHGLNSLGIRTTV------LTEG----------GSTLTITLA 83 (187)
T ss_dssp HHHHHHHHHHHHC---SEEEEEC-CGG---GHHHHHHHHHHHHHTTCCEEE------ECCC----------THHHHHHHH
T ss_pred HHHHHHHHHHHhC---CEEEEEe-cCc---hHHHHHHHHHHHHhcCCCEEE------ecCC----------chhHHHHHh
Confidence 3466666666543 2899998 442 333 344456666665533 2211 111111122
Q ss_pred hccCCCEEEeCCCCCCCchhHHHHHHHHHHHcCCCEEEEeh
Q 007533 357 LLKGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGICL 397 (599)
Q Consensus 357 ~L~~~DGIlVPGGfG~rg~eg~i~aik~are~~iP~LGICL 397 (599)
.+..=|-+|+-.-.|. ....+.+++.|++++.|+++|+-
T Consensus 84 ~~~~~d~~i~iS~sG~--t~~~~~~~~~ak~~g~~vi~IT~ 122 (187)
T 3sho_A 84 NLRPTDLMIGVSVWRY--LRDTVAALAGAAERGVPTMALTD 122 (187)
T ss_dssp TCCTTEEEEEECCSSC--CHHHHHHHHHHHHTTCCEEEEES
T ss_pred cCCCCCEEEEEeCCCC--CHHHHHHHHHHHHCCCCEEEEeC
Confidence 3444455554333332 35578999999999999999984
No 230
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=38.65 E-value=21 Score=33.93 Aligned_cols=34 Identities=29% Similarity=0.328 Sum_probs=23.6
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHH-CCCeeEEeeec
Q 007533 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKA-CGLRVTCIKID 40 (599)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~~s~g~ll~~-~g~~v~~~k~d 40 (599)
+|-|+||||- +|||+.++ +.|-. +|++|..+=.+
T Consensus 4 ~k~vlITGas-ggIG~~~a-----~~L~~~~g~~V~~~~r~ 38 (276)
T 1wma_A 4 IHVALVTGGN-KGIGLAIV-----RDLCRLFSGDVVLTARD 38 (276)
T ss_dssp CCEEEESSCS-SHHHHHHH-----HHHHHHSSSEEEEEESS
T ss_pred CCEEEEeCCC-cHHHHHHH-----HHHHHhcCCeEEEEeCC
Confidence 4789999985 77777554 44555 89988776443
No 231
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=38.60 E-value=17 Score=35.08 Aligned_cols=32 Identities=31% Similarity=0.434 Sum_probs=23.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~ 39 (599)
|.++||||- +|||+. +.+.|..+|++|...=.
T Consensus 8 k~~lVTGas-~GIG~a-----ia~~l~~~G~~V~~~~r 39 (250)
T 3nyw_A 8 GLAIITGAS-QGIGAV-----IAAGLATDGYRVVLIAR 39 (250)
T ss_dssp CEEEEESTT-SHHHHH-----HHHHHHHHTCEEEEEES
T ss_pred CEEEEECCC-cHHHHH-----HHHHHHHCCCEEEEEEC
Confidence 689999996 788874 44566677998877543
No 232
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=38.31 E-value=19 Score=33.93 Aligned_cols=30 Identities=33% Similarity=0.467 Sum_probs=22.9
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~ 37 (599)
|-|+||||- +|||+.+ .+.|..+|++|..+
T Consensus 6 ~~vlItGas-ggiG~~~-----a~~l~~~G~~V~~~ 35 (247)
T 2hq1_A 6 KTAIVTGSS-RGLGKAI-----AWKLGNMGANIVLN 35 (247)
T ss_dssp CEEEESSCS-SHHHHHH-----HHHHHHTTCEEEEE
T ss_pred cEEEEECCC-chHHHHH-----HHHHHHCCCEEEEE
Confidence 679999986 7888754 45677789988765
No 233
>3lv8_A DTMP kinase, thymidylate kinase; structural genomics, in diseases, center for structural genomics of infectious DISE ATP-binding; HET: ADP TMP TYD; 1.80A {Vibrio cholerae o1 biovar eltor} PDB: 3n2i_A*
Probab=38.31 E-value=31 Score=33.75 Aligned_cols=35 Identities=23% Similarity=0.457 Sum_probs=30.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCe-eEEee
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLR-VTCIK 38 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~-v~~~k 38 (599)
++|++.|. +|-||+..+.-|...|+.+|++ |...+
T Consensus 28 ~~i~~eG~--~GsGKsT~~~~l~~~l~~~~~~~~~~~r 63 (236)
T 3lv8_A 28 KFIVIEGL--EGAGKSTAIQVVVETLQQNGIDHITRTR 63 (236)
T ss_dssp CEEEEEES--TTSCHHHHHHHHHHHHHHTTCCCEEEEE
T ss_pred eEEEEECC--CCCCHHHHHHHHHHHHHhcCCCeeeeec
Confidence 58999985 8999999999999999999999 55443
No 234
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=38.19 E-value=20 Score=34.85 Aligned_cols=33 Identities=39% Similarity=0.524 Sum_probs=25.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~d 40 (599)
|.++||||- +|||+. +.+.|-.+|++|.++-.+
T Consensus 11 k~vlVTGas-~gIG~~-----ia~~l~~~G~~V~~~~~~ 43 (287)
T 3pxx_A 11 KVVLVTGGA-RGQGRS-----HAVKLAEEGADIILFDIC 43 (287)
T ss_dssp CEEEEETTT-SHHHHH-----HHHHHHHTTCEEEEEECC
T ss_pred CEEEEeCCC-ChHHHH-----HHHHHHHCCCeEEEEccc
Confidence 789999986 777764 556677889999876443
No 235
>3hcw_A Maltose operon transcriptional repressor; RNA-binding, PSI-2, NYSGXRC, STRU genomics, protein structure initiative; 2.20A {Staphylococcus aureus subsp}
Probab=38.14 E-value=64 Score=31.13 Aligned_cols=31 Identities=13% Similarity=0.210 Sum_probs=20.8
Q ss_pred cCCCEEEeCCCCCCCchhHHHHHHHHHHHcCCCEEEE
Q 007533 359 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGI 395 (599)
Q Consensus 359 ~~~DGIlVPGGfG~rg~eg~i~aik~are~~iP~LGI 395 (599)
.++||||+.+..... ..++.+.+.++|+.-+
T Consensus 67 ~~vdGiI~~~~~~~~------~~~~~l~~~~iPvV~i 97 (295)
T 3hcw_A 67 RMVDAFILLYSKEND------PIKQMLIDESMPFIVI 97 (295)
T ss_dssp TCCSEEEESCCCTTC------HHHHHHHHTTCCEEEE
T ss_pred CCcCEEEEcCcccCh------HHHHHHHhCCCCEEEE
Confidence 689999998743221 3455666778897644
No 236
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A
Probab=38.01 E-value=23 Score=34.44 Aligned_cols=34 Identities=29% Similarity=0.472 Sum_probs=25.8
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~dp 41 (599)
|.|+||||- +|||+.+ .+.|.++|++|...-.++
T Consensus 9 k~vlVTGas-~gIG~~i-----a~~l~~~G~~V~~~~r~~ 42 (264)
T 2dtx_A 9 KVVIVTGAS-MGIGRAI-----AERFVDEGSKVIDLSIHD 42 (264)
T ss_dssp CEEEEESCS-SHHHHHH-----HHHHHHTTCEEEEEESSC
T ss_pred CEEEEeCCC-CHHHHHH-----HHHHHHCCCEEEEEecCc
Confidence 789999985 7888754 466778899998775443
No 237
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=37.98 E-value=22 Score=34.56 Aligned_cols=32 Identities=34% Similarity=0.503 Sum_probs=24.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~ 39 (599)
|.++||||- +|||+. +.+.|-.+|++|...-.
T Consensus 31 k~vlVTGas-~GIG~a-----ia~~l~~~G~~Vi~~~r 62 (281)
T 3ppi_A 31 ASAIVSGGA-GGLGEA-----TVRRLHADGLGVVIADL 62 (281)
T ss_dssp EEEEEETTT-SHHHHH-----HHHHHHHTTCEEEEEES
T ss_pred CEEEEECCC-ChHHHH-----HHHHHHHCCCEEEEEeC
Confidence 789999985 788775 44566778999887643
No 238
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=37.92 E-value=21 Score=35.11 Aligned_cols=31 Identities=29% Similarity=0.416 Sum_probs=23.9
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k 38 (599)
|.++||||- +|||+.+ .+.|-.+|++|...-
T Consensus 34 k~~lVTGas-~GIG~ai-----a~~la~~G~~V~~~~ 64 (275)
T 4imr_A 34 RTALVTGSS-RGIGAAI-----AEGLAGAGAHVILHG 64 (275)
T ss_dssp CEEEETTCS-SHHHHHH-----HHHHHHTTCEEEEEE
T ss_pred CEEEEECCC-CHHHHHH-----HHHHHHCCCEEEEEc
Confidence 789999986 8888754 456778899988653
No 239
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=37.75 E-value=19 Score=35.24 Aligned_cols=29 Identities=38% Similarity=0.681 Sum_probs=22.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEE
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTC 36 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~ 36 (599)
|.++||||- +|||+. +.+.|-.+|++|.+
T Consensus 29 k~vlVTGas-~gIG~a-----ia~~la~~G~~V~~ 57 (269)
T 4dmm_A 29 RIALVTGAS-RGIGRA-----IALELAAAGAKVAV 57 (269)
T ss_dssp CEEEETTCS-SHHHHH-----HHHHHHHTTCEEEE
T ss_pred CEEEEECCC-CHHHHH-----HHHHHHHCCCEEEE
Confidence 789999986 788875 45567778998865
No 240
>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2
Probab=37.66 E-value=23 Score=34.05 Aligned_cols=33 Identities=33% Similarity=0.519 Sum_probs=24.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~d 40 (599)
|-++||||- +|||+.+ .+.|..+|++|...-.+
T Consensus 7 k~vlVTGas-~gIG~~i-----a~~l~~~G~~V~~~~r~ 39 (256)
T 2d1y_A 7 KGVLVTGGA-RGIGRAI-----AQAFAREGALVALCDLR 39 (256)
T ss_dssp CEEEEETTT-SHHHHHH-----HHHHHHTTCEEEEEESS
T ss_pred CEEEEeCCC-CHHHHHH-----HHHHHHCCCEEEEEeCC
Confidence 789999985 7888754 45677789998876443
No 241
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=37.52 E-value=22 Score=34.57 Aligned_cols=32 Identities=34% Similarity=0.398 Sum_probs=24.0
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 007533 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (599)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k 38 (599)
+|-++||||- +|||+.+ .+.|..+|++|...-
T Consensus 5 ~k~vlVTGas-~gIG~~~-----a~~l~~~G~~V~~~~ 36 (281)
T 3m1a_A 5 AKVWLVTGAS-SGFGRAI-----AEAAVAAGDTVIGTA 36 (281)
T ss_dssp CCEEEETTTT-SHHHHHH-----HHHHHHTTCEEEEEE
T ss_pred CcEEEEECCC-ChHHHHH-----HHHHHHCCCEEEEEe
Confidence 3789999986 7777754 456777899987653
No 242
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=37.49 E-value=20 Score=34.02 Aligned_cols=31 Identities=32% Similarity=0.418 Sum_probs=23.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k 38 (599)
|.++||||- +|||+ .+.+.|-.+|++|...-
T Consensus 6 k~vlITGas-~gIG~-----~~a~~l~~~G~~v~~~~ 36 (247)
T 3lyl_A 6 KVALVTGAS-RGIGF-----EVAHALASKGATVVGTA 36 (247)
T ss_dssp CEEEESSCS-SHHHH-----HHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCC-ChHHH-----HHHHHHHHCCCEEEEEe
Confidence 789999985 77776 45566778899887653
No 243
>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}
Probab=37.45 E-value=24 Score=33.84 Aligned_cols=34 Identities=29% Similarity=0.375 Sum_probs=25.9
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~dp 41 (599)
|-++||||- +|||+.+ .+.|.++|++|...-.++
T Consensus 8 k~vlVTGas-~giG~~i-----a~~l~~~G~~V~~~~r~~ 41 (250)
T 2fwm_X 8 KNVWVTGAG-KGIGYAT-----ALAFVEAGAKVTGFDQAF 41 (250)
T ss_dssp CEEEEESTT-SHHHHHH-----HHHHHHTTCEEEEEESCC
T ss_pred CEEEEeCCC-cHHHHHH-----HHHHHHCCCEEEEEeCch
Confidence 679999986 7888754 456778899998875543
No 244
>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=37.37 E-value=20 Score=34.30 Aligned_cols=29 Identities=34% Similarity=0.636 Sum_probs=22.0
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEE
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTC 36 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~ 36 (599)
|.|+||||- +|||+.+ .+.|-.+|++|..
T Consensus 14 k~vlITGas-~giG~~i-----a~~l~~~G~~v~~ 42 (256)
T 3ezl_A 14 RIAYVTGGM-GGIGTSI-----CQRLHKDGFRVVA 42 (256)
T ss_dssp EEEEETTTT-SHHHHHH-----HHHHHHTTEEEEE
T ss_pred CEEEEECCC-ChHHHHH-----HHHHHHCCCEEEE
Confidence 789999995 7888754 4566778988754
No 245
>3nrs_A Dihydrofolate:folylpolyglutamate synthetase; structural genomics, center for structural genomics of infec diseases, csgid; HET: TLA MES; 1.80A {Yersinia pestis} PDB: 3n2a_A* 3pyz_A* 3qcz_A*
Probab=37.35 E-value=27 Score=37.01 Aligned_cols=32 Identities=41% Similarity=0.578 Sum_probs=28.0
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~ 37 (599)
|.|=|||- =|||-|++-|..+|++.||+|-..
T Consensus 53 ~vI~VtGT----NGKgSt~~~l~~iL~~~G~~vg~~ 84 (437)
T 3nrs_A 53 KIFTVAGT----NGKGTTCCTLEAILLAAGLRVGVY 84 (437)
T ss_dssp EEEEEECS----SSHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CEEEEECC----cChHHHHHHHHHHHHHCCCcEEEE
Confidence 67888885 699999999999999999999653
No 246
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=37.32 E-value=20 Score=34.83 Aligned_cols=30 Identities=40% Similarity=0.568 Sum_probs=22.3
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEE
Q 007533 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTC 36 (599)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~ 36 (599)
+|.|+||||- +|||+ ++.+.|-.+|++|.+
T Consensus 26 ~k~vlITGas-~gIG~-----a~a~~l~~~G~~V~~ 55 (272)
T 4e3z_A 26 TPVVLVTGGS-RGIGA-----AVCRLAARQGWRVGV 55 (272)
T ss_dssp SCEEEETTTT-SHHHH-----HHHHHHHHTTCEEEE
T ss_pred CCEEEEECCC-chHHH-----HHHHHHHHCCCEEEE
Confidence 3789999984 78876 455667778988754
No 247
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=37.30 E-value=22 Score=33.55 Aligned_cols=31 Identities=32% Similarity=0.473 Sum_probs=23.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k 38 (599)
|-++||||- +|||+.+ .+.|..+|++|...-
T Consensus 3 k~vlItGas-ggiG~~~-----a~~l~~~G~~V~~~~ 33 (250)
T 2cfc_A 3 RVAIVTGAS-SGNGLAI-----ATRFLARGDRVAALD 33 (250)
T ss_dssp CEEEEETTT-SHHHHHH-----HHHHHHTTCEEEEEE
T ss_pred CEEEEeCCC-chHHHHH-----HHHHHHCCCEEEEEe
Confidence 789999986 7887754 455667899887654
No 248
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=37.05 E-value=20 Score=34.14 Aligned_cols=31 Identities=39% Similarity=0.538 Sum_probs=23.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k 38 (599)
|.|+||||- +|||+. +.+.|..+|++|...-
T Consensus 15 k~vlVTGas-~gIG~~-----~a~~l~~~G~~V~~~~ 45 (249)
T 3f9i_A 15 KTSLITGAS-SGIGSA-----IARLLHKLGSKVIISG 45 (249)
T ss_dssp CEEEETTTT-SHHHHH-----HHHHHHHTTCEEEEEE
T ss_pred CEEEEECCC-ChHHHH-----HHHHHHHCCCEEEEEc
Confidence 789999994 777764 4567778899988753
No 249
>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}
Probab=36.98 E-value=24 Score=34.83 Aligned_cols=33 Identities=39% Similarity=0.678 Sum_probs=26.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~d 40 (599)
|-++||||- ||||+. +.+.|-..|.+|...-+|
T Consensus 12 K~alVTGas-~GIG~a-----ia~~la~~Ga~Vv~~~~~ 44 (242)
T 4b79_A 12 QQVLVTGGS-SGIGAA-----IAMQFAELGAEVVALGLD 44 (242)
T ss_dssp CEEEEETTT-SHHHHH-----HHHHHHHTTCEEEEEESS
T ss_pred CEEEEeCCC-CHHHHH-----HHHHHHHCCCEEEEEeCC
Confidence 779999995 888875 567888999999886544
No 250
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=36.83 E-value=22 Score=34.42 Aligned_cols=32 Identities=28% Similarity=0.301 Sum_probs=24.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~ 39 (599)
|.++||||- +|||+. +.+.|-.+|++|...-.
T Consensus 9 k~~lVTGas-~gIG~a-----~a~~l~~~G~~V~~~~r 40 (255)
T 4eso_A 9 KKAIVIGGT-HGMGLA-----TVRRLVEGGAEVLLTGR 40 (255)
T ss_dssp CEEEEETCS-SHHHHH-----HHHHHHHTTCEEEEEES
T ss_pred CEEEEECCC-CHHHHH-----HHHHHHHCCCEEEEEeC
Confidence 789999985 788874 55677788999887543
No 251
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=36.81 E-value=22 Score=34.71 Aligned_cols=32 Identities=25% Similarity=0.504 Sum_probs=24.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~ 39 (599)
|.++||||- ||||+.+ .+.|-.+|++|..+-.
T Consensus 12 k~~lVTGas-~GIG~a~-----a~~la~~G~~V~~~~r 43 (277)
T 3tsc_A 12 RVAFITGAA-RGQGRAH-----AVRMAAEGADIIAVDI 43 (277)
T ss_dssp CEEEEESTT-SHHHHHH-----HHHHHHTTCEEEEEEC
T ss_pred CEEEEECCc-cHHHHHH-----HHHHHHcCCEEEEEec
Confidence 789999986 7888754 4567788999887643
No 252
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=36.71 E-value=21 Score=34.70 Aligned_cols=32 Identities=38% Similarity=0.534 Sum_probs=24.0
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~ 39 (599)
|.++||||- +|||+.++ +.|..+|++|...-.
T Consensus 22 k~~lVTGas-~gIG~~ia-----~~l~~~G~~V~~~~r 53 (267)
T 1vl8_A 22 RVALVTGGS-RGLGFGIA-----QGLAEAGCSVVVASR 53 (267)
T ss_dssp CEEEEETTT-SHHHHHHH-----HHHHHTTCEEEEEES
T ss_pred CEEEEECCC-CHHHHHHH-----HHHHHCCCEEEEEeC
Confidence 789999985 78887554 566778998877533
No 253
>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*
Probab=36.69 E-value=28 Score=40.40 Aligned_cols=36 Identities=17% Similarity=0.228 Sum_probs=32.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHC-----CCeeEEee
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKAC-----GLRVTCIK 38 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~-----g~~v~~~k 38 (599)
|-|||+ |.=|+.||=++++.|-++|+.+ |++|...|
T Consensus 35 ~~l~I~-gt~s~vGKT~vt~gL~r~l~~~~~~~~G~~V~~fK 75 (831)
T 4a0g_A 35 PTYLIW-SANTSLGKTLVSTGIAASFLLQQPSSSATKLLYLK 75 (831)
T ss_dssp CEEEEE-ESSSSSCHHHHHHHHHHHHHSCSSCCTTCEEEEEE
T ss_pred ccEEEE-ECCCCCCHHHHHHHHHHHHHhcccccCCceEEEEc
Confidence 556666 4679999999999999999999 99999999
No 254
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=36.61 E-value=21 Score=35.06 Aligned_cols=33 Identities=27% Similarity=0.488 Sum_probs=25.0
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~d 40 (599)
|.++||||- ||||+.+ .+.|-.+|++|...-.+
T Consensus 5 k~~lVTGas-~GIG~ai-----a~~la~~G~~V~~~~r~ 37 (264)
T 3tfo_A 5 KVILITGAS-GGIGEGI-----ARELGVAGAKILLGARR 37 (264)
T ss_dssp CEEEESSTT-SHHHHHH-----HHHHHHTTCEEEEEESS
T ss_pred CEEEEeCCc-cHHHHHH-----HHHHHHCCCEEEEEECC
Confidence 789999997 8888755 45677889988776443
No 255
>2pjk_A 178AA long hypothetical molybdenum cofactor biosynthesis protein B; 3D-structure, structural genomics, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii} PDB: 3iwt_A*
Probab=36.55 E-value=43 Score=31.33 Aligned_cols=47 Identities=21% Similarity=0.234 Sum_probs=32.0
Q ss_pred eEEcccchHHHHHHHHHHhcccCCCCCCCCcEEEEeeCcc-ccccccchHHHHHHHh
Q 007533 111 VQVVPHITDEIQDWIERVAMIPVDGKEGPVDVCVIELGGT-IGDIESMPFIEALGQF 166 (599)
Q Consensus 111 vqviphit~~i~~~i~~~~~~p~d~~~~~~dv~i~e~ggt-vgdies~pf~ea~rq~ 166 (599)
..+||.=-++|++.|++... ..++|++|+ .||| +|+--=.| ||++++
T Consensus 59 ~~iv~Dd~~~I~~al~~a~~------~~~~DlVit-tGG~s~g~~D~t~--eal~~~ 106 (178)
T 2pjk_A 59 YSLVPDDKIKILKAFTDALS------IDEVDVIIS-TGGTGYSPTDITV--ETIRKL 106 (178)
T ss_dssp EEEECSCHHHHHHHHHHHHT------CTTCCEEEE-ESCCSSSTTCCHH--HHHGGG
T ss_pred EEEeCCCHHHHHHHHHHHHh------cCCCCEEEE-CCCCCCCCCcchH--HHHHHH
Confidence 35889989999999999873 234898886 7876 55533333 555544
No 256
>1o5z_A Folylpolyglutamate synthase/dihydrofolate synthas; TM0166, structural genomics, JC protein structure initiative; 2.10A {Thermotoga maritima} SCOP: c.59.1.2 c.72.2.2
Probab=36.44 E-value=31 Score=36.68 Aligned_cols=32 Identities=31% Similarity=0.443 Sum_probs=28.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~ 37 (599)
|.|-|||- =|||.|++=|..+|++.|++|...
T Consensus 53 ~vI~VTGT----nGKtTT~~~l~~iL~~~G~~vg~~ 84 (442)
T 1o5z_A 53 KTIHIGGT----NGKGSVANMVSNILVSQGYRVGSY 84 (442)
T ss_dssp EEEEEECS----SSHHHHHHHHHHHHHHHTCCEEEE
T ss_pred CEEEEECC----cCHHHHHHHHHHHHHHCCCCEEEE
Confidence 67888884 699999999999999999998754
No 257
>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=36.42 E-value=26 Score=33.12 Aligned_cols=34 Identities=32% Similarity=0.448 Sum_probs=25.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~dp 41 (599)
|-++||||- +|||+. +.+.|.++|++|...-.++
T Consensus 4 k~vlITGas-~gIG~~-----~a~~l~~~G~~V~~~~r~~ 37 (236)
T 1ooe_A 4 GKVIVYGGK-GALGSA-----ILEFFKKNGYTVLNIDLSA 37 (236)
T ss_dssp EEEEEETTT-SHHHHH-----HHHHHHHTTEEEEEEESSC
T ss_pred CEEEEECCC-cHHHHH-----HHHHHHHCCCEEEEEecCc
Confidence 789999984 677764 5567778899998875543
No 258
>1vjn_A Zn-dependent hydrolase of metallo-beta-lactamase superfamily TM0207; metallo-hydrolase/oxidoreductase fold, structural genomics; 2.00A {Thermotoga maritima} SCOP: d.157.1.4
Probab=36.35 E-value=38 Score=32.33 Aligned_cols=71 Identities=18% Similarity=0.162 Sum_probs=49.5
Q ss_pred CCcEEEEeeCccccccccchHHHHHHHhhhHcCCCCEEEEeeeeeeeecCCCccccCCchhhhhhhhcCCCcccEEEEec
Q 007533 139 PVDVCVIELGGTIGDIESMPFIEALGQFSYRVGPGNFCLIHVSLVPVLNVVGEQKTKPTQHSVRGLRGQGLTPNILACRS 218 (599)
Q Consensus 139 ~~dv~i~e~ggtvgdies~pf~ea~rq~~~~~g~~n~~~ihv~~vp~~~~~~e~ktkptq~sv~~Lrs~Gi~pd~iv~R~ 218 (599)
++|++++|+||. +. +-.-|| .++..+++...++.+|.+-- ++. ....|.+.-.+++++.++.++-+.++.
T Consensus 138 ~~Dvlil~~g~~-~h---~~~~~a-~~~~~~~~~k~vi~~H~~~~-~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (220)
T 1vjn_A 138 EIDVLLVPVGGT-YT---IGPKEA-KEVADLLNAKVIIPMHYKTK-YLK----FNLLPVDDFLKLFDSYERVGNILELFE 207 (220)
T ss_dssp CCSEEEEECCSS-SS---CCHHHH-HHHHHHTTCSEEEEESCCCS-SCC----TTCCCTHHHHTTSSCCEECCSEEEESS
T ss_pred CCCEEEEcCCCc-Cc---CCHHHH-HHHHHhcCCCEEEEEecccc-ccc----CCchhHHHHHHHHHhcCCCccceEEec
Confidence 589999999875 21 233233 34445677889999999864 332 125688888889998888877777775
Q ss_pred C
Q 007533 219 T 219 (599)
Q Consensus 219 ~ 219 (599)
.
T Consensus 208 ~ 208 (220)
T 1vjn_A 208 K 208 (220)
T ss_dssp C
T ss_pred C
Confidence 5
No 259
>2fvy_A D-galactose-binding periplasmic protein; periplasmic binding protien, hinge, chemotaxis, transport,; HET: BGC; 0.92A {Escherichia coli} SCOP: c.93.1.1 PDB: 1glg_A* 2fw0_A* 2gbp_A* 2qw1_A* 2hph_A* 2ipn_A* 2ipm_A* 2ipl_A* 1gca_A* 1gcg_A 3ga5_A* 3gbp_A*
Probab=36.24 E-value=1.3e+02 Score=28.66 Aligned_cols=86 Identities=13% Similarity=0.094 Sum_probs=43.9
Q ss_pred ceEEEEEeecCCCcchHH-HHHHHHHHcCCccee-eeEEEEecCCCCCCccccCCchhhhHHHHh--ccCCCEEEeCCCC
Q 007533 295 PVRIAMVGKYTGLSDAYL-SILKALLHASVDLRK-KLVIDWIPACDLEDATEKENPDAYKAAWKL--LKGADGILVPGGF 370 (599)
Q Consensus 295 ~v~IaiVGkY~~l~DaY~-SIi~AL~haG~~~~v-~v~i~wi~s~~le~~~~~~~p~~y~~a~~~--L~~~DGIlVPGGf 370 (599)
+.+||++-. .+.+.|. .+++.++.+..+... .+ .+.++.. +++.-....+. -.++||||+.+..
T Consensus 2 s~~Igvi~~--~~~~~~~~~~~~gi~~~a~~~g~~~~--~~~~~~~--------~~~~~~~~~~~~~~~~vdgiii~~~~ 69 (309)
T 2fvy_A 2 DTRIGVTIY--KYDDNFMSVVRKAIEQDAKAAPDVQL--LMNDSQN--------DQSKQNDQIDVLLAKGVKALAINLVD 69 (309)
T ss_dssp CEEEEEEES--CTTSHHHHHHHHHHHHHHHTCTTEEE--EEEECTT--------CHHHHHHHHHHHHHTTCSEEEECCSS
T ss_pred CcEEEEEec--cCCcHHHHHHHHHHHHHHHhcCCeEE--EEecCCC--------CHHHHHHHHHHHHHcCCCEEEEeCCC
Confidence 357888842 3444443 566655555443332 22 2333321 11111112222 2689999997632
Q ss_pred CCCchhHHHHHHHHHHHcCCCEEEEe
Q 007533 371 GNRGVQGKILAAKYAREHRIPYLGIC 396 (599)
Q Consensus 371 G~rg~eg~i~aik~are~~iP~LGIC 396 (599)
. ......++.+.+.++|+.-+.
T Consensus 70 ~----~~~~~~~~~~~~~~iPvV~~~ 91 (309)
T 2fvy_A 70 P----AAAGTVIEKARGQNVPVVFFN 91 (309)
T ss_dssp G----GGHHHHHHHHHTTTCCEEEES
T ss_pred c----chhHHHHHHHHHCCCcEEEec
Confidence 2 112345667777899987664
No 260
>3kke_A LACI family transcriptional regulator; structural genomics, DNA-binding, transcription regulation, PSI-2; 2.20A {Mycobacterium smegmatis str}
Probab=36.14 E-value=94 Score=30.05 Aligned_cols=31 Identities=19% Similarity=0.162 Sum_probs=20.6
Q ss_pred cCCCEEEeCCCCCCCchhHHHHHHHHHHHcCCCEEEE
Q 007533 359 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGI 395 (599)
Q Consensus 359 ~~~DGIlVPGGfG~rg~eg~i~aik~are~~iP~LGI 395 (599)
.++||||+.+..... + ..++.+.+ ++|+.-+
T Consensus 70 ~~vdgiI~~~~~~~~--~---~~~~~l~~-~iPvV~i 100 (303)
T 3kke_A 70 GRVDGVLLQRREDFD--D---DMLAAVLE-GVPAVTI 100 (303)
T ss_dssp CSSSEEEECCCTTCC--H---HHHHHHHT-TSCEEEE
T ss_pred CCCcEEEEecCCCCc--H---HHHHHHhC-CCCEEEE
Confidence 689999998753322 1 14556666 8998655
No 261
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Probab=36.13 E-value=26 Score=33.59 Aligned_cols=33 Identities=21% Similarity=0.502 Sum_probs=24.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~d 40 (599)
|.++||||- +|||+.+ .+.|..+|++|...-.+
T Consensus 8 k~vlVTGas-~gIG~~i-----a~~l~~~G~~V~~~~r~ 40 (249)
T 2ew8_A 8 KLAVITGGA-NGIGRAI-----AERFAVEGADIAIADLV 40 (249)
T ss_dssp CEEEEETTT-SHHHHHH-----HHHHHHTTCEEEEEESS
T ss_pred CEEEEeCCC-cHHHHHH-----HHHHHHCCCEEEEEcCC
Confidence 689999984 7777754 45567789998876433
No 262
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=36.12 E-value=22 Score=34.21 Aligned_cols=31 Identities=39% Similarity=0.567 Sum_probs=23.8
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k 38 (599)
|.++||||- +|||+.+ .+.|-.+|++|...-
T Consensus 10 k~~lVTGas-~gIG~a~-----a~~l~~~G~~V~~~~ 40 (248)
T 3op4_A 10 KVALVTGAS-RGIGKAI-----AELLAERGAKVIGTA 40 (248)
T ss_dssp CEEEESSCS-SHHHHHH-----HHHHHHTTCEEEEEE
T ss_pred CEEEEeCCC-CHHHHHH-----HHHHHHCCCEEEEEe
Confidence 789999985 7888754 456778899987653
No 263
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=36.02 E-value=21 Score=34.42 Aligned_cols=31 Identities=29% Similarity=0.467 Sum_probs=23.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k 38 (599)
|.++||||- +|||+.++ +.|-.+|++|...=
T Consensus 30 k~vlITGas-~gIG~~la-----~~l~~~G~~V~~~~ 60 (262)
T 3rkr_A 30 QVAVVTGAS-RGIGAAIA-----RKLGSLGARVVLTA 60 (262)
T ss_dssp CEEEESSTT-SHHHHHHH-----HHHHHTTCEEEEEE
T ss_pred CEEEEECCC-ChHHHHHH-----HHHHHCCCEEEEEE
Confidence 789999985 88887654 56667899887653
No 264
>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*
Probab=36.02 E-value=22 Score=34.43 Aligned_cols=29 Identities=38% Similarity=0.622 Sum_probs=22.2
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEE
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTC 36 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~ 36 (599)
|.|+||||- +|||+. +.+.|-.+|++|..
T Consensus 27 k~vlVTGas-~gIG~~-----la~~l~~~G~~v~i 55 (267)
T 4iiu_A 27 RSVLVTGAS-KGIGRA-----IARQLAADGFNIGV 55 (267)
T ss_dssp CEEEETTTT-SHHHHH-----HHHHHHHTTCEEEE
T ss_pred CEEEEECCC-ChHHHH-----HHHHHHHCCCEEEE
Confidence 789999985 888874 55667778988754
No 265
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=35.96 E-value=22 Score=34.59 Aligned_cols=33 Identities=30% Similarity=0.501 Sum_probs=25.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~d 40 (599)
|.++||||- +|||+.+ .+.|-.+|++|...-.+
T Consensus 11 k~~lVTGas-~gIG~a~-----a~~l~~~G~~V~~~~r~ 43 (281)
T 3s55_A 11 KTALITGGA-RGMGRSH-----AVALAEAGADIAICDRC 43 (281)
T ss_dssp CEEEEETTT-SHHHHHH-----HHHHHHTTCEEEEEECC
T ss_pred CEEEEeCCC-chHHHHH-----HHHHHHCCCeEEEEeCC
Confidence 789999986 7888754 56677889998876544
No 266
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=35.85 E-value=23 Score=34.07 Aligned_cols=31 Identities=23% Similarity=0.410 Sum_probs=23.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k 38 (599)
|-++||||- +|||+.+ .+.|..+|++|...-
T Consensus 8 k~vlVTGas-~gIG~~i-----a~~l~~~G~~V~~~~ 38 (263)
T 3ai3_A 8 KVAVITGSS-SGIGLAI-----AEGFAKEGAHIVLVA 38 (263)
T ss_dssp CEEEEESCS-SHHHHHH-----HHHHHHTTCEEEEEE
T ss_pred CEEEEECCC-chHHHHH-----HHHHHHCCCEEEEEc
Confidence 679999985 7888754 455777899887653
No 267
>2h3h_A Sugar ABC transporter, periplasmic sugar-binding protein; glucose binding protein, periplasmic binding protein, GBP; HET: BGC; 1.70A {Thermotoga maritima} PDB: 2qvc_A* 3c6q_B*
Probab=35.84 E-value=1.3e+02 Score=29.09 Aligned_cols=34 Identities=26% Similarity=0.294 Sum_probs=22.5
Q ss_pred cCCCEEEeCCCCCCCchhHHHHHHHHHHHcCCCEEEEe
Q 007533 359 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGIC 396 (599)
Q Consensus 359 ~~~DGIlVPGGfG~rg~eg~i~aik~are~~iP~LGIC 396 (599)
.++||||+.+.... . ....++.+.+.++|+.-+.
T Consensus 56 ~~vdgiIi~~~~~~-~---~~~~~~~~~~~~iPvV~~~ 89 (313)
T 2h3h_A 56 EGVNGIAIAPSDPT-A---VIPTIKKALEMGIPVVTLD 89 (313)
T ss_dssp TTCSEEEECCSSTT-T---THHHHHHHHHTTCCEEEES
T ss_pred cCCCEEEEeCCChH-H---HHHHHHHHHHCCCeEEEeC
Confidence 68999999764321 1 1234566777899987653
No 268
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}
Probab=35.75 E-value=22 Score=34.22 Aligned_cols=32 Identities=34% Similarity=0.704 Sum_probs=23.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~ 39 (599)
|.++||||- +|||+.++ +.|..+|++|...-.
T Consensus 3 k~vlVTGas-~gIG~~ia-----~~l~~~G~~V~~~~r 34 (258)
T 3a28_C 3 KVAMVTGGA-QGIGRGIS-----EKLAADGFDIAVADL 34 (258)
T ss_dssp CEEEEETTT-SHHHHHHH-----HHHHHHTCEEEEEEC
T ss_pred CEEEEeCCC-cHHHHHHH-----HHHHHCCCEEEEEeC
Confidence 789999985 78887544 456667998876533
No 269
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=35.75 E-value=22 Score=34.44 Aligned_cols=29 Identities=34% Similarity=0.568 Sum_probs=22.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEE
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTC 36 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~ 36 (599)
|-++||||- +|||+.+ .+.|-.+|++|..
T Consensus 5 k~vlVTGas-~gIG~ai-----a~~l~~~G~~vv~ 33 (258)
T 3oid_A 5 KCALVTGSS-RGVGKAA-----AIRLAENGYNIVI 33 (258)
T ss_dssp CEEEESSCS-SHHHHHH-----HHHHHHTTCEEEE
T ss_pred CEEEEecCC-chHHHHH-----HHHHHHCCCEEEE
Confidence 789999985 7888754 4567788998865
No 270
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=35.65 E-value=26 Score=34.13 Aligned_cols=32 Identities=28% Similarity=0.509 Sum_probs=24.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~ 39 (599)
|.++||||- +|||+. +.+.|-.+|++|...-.
T Consensus 12 k~vlVTGas-~gIG~a-----ia~~l~~~G~~V~~~~r 43 (271)
T 3tzq_B 12 KVAIITGAC-GGIGLE-----TSRVLARAGARVVLADL 43 (271)
T ss_dssp CEEEEETTT-SHHHHH-----HHHHHHHTTCEEEEEEC
T ss_pred CEEEEECCC-cHHHHH-----HHHHHHHCCCEEEEEcC
Confidence 789999995 788775 44567788999887643
No 271
>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}
Probab=35.52 E-value=20 Score=34.42 Aligned_cols=30 Identities=37% Similarity=0.523 Sum_probs=23.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~ 37 (599)
|.++||||- ||||+. +.+.|-.+|++|...
T Consensus 10 k~vlVTGas-~gIG~a-----ia~~l~~~G~~V~~~ 39 (257)
T 3tl3_A 10 AVAVVTGGA-SGLGLA-----TTKRLLDAGAQVVVL 39 (257)
T ss_dssp CEEEEETTT-SHHHHH-----HHHHHHHHTCEEEEE
T ss_pred CEEEEeCCC-CHHHHH-----HHHHHHHCCCEEEEE
Confidence 679999986 788875 445677789988764
No 272
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=35.37 E-value=22 Score=33.94 Aligned_cols=30 Identities=33% Similarity=0.524 Sum_probs=22.9
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~ 37 (599)
|.++||||- +|||+.++ +.|..+|++|...
T Consensus 5 k~vlVTGas-~giG~~ia-----~~l~~~G~~V~~~ 34 (246)
T 2uvd_A 5 KVALVTGAS-RGIGRAIA-----IDLAKQGANVVVN 34 (246)
T ss_dssp CEEEETTCS-SHHHHHHH-----HHHHHTTCEEEEE
T ss_pred CEEEEECCC-cHHHHHHH-----HHHHHCCCEEEEE
Confidence 789999986 88887654 5566789887654
No 273
>4tmk_A Protein (thymidylate kinase); ATP:DTMP phosphotransferase, transferase; HET: T5A; 1.98A {Escherichia coli} SCOP: c.37.1.1 PDB: 5tmp_A*
Probab=35.29 E-value=38 Score=32.47 Aligned_cols=33 Identities=24% Similarity=0.459 Sum_probs=28.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCC-eeEE
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGL-RVTC 36 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~-~v~~ 36 (599)
++|.+.|. +|-||+..+..+-..|+.+|+ .|..
T Consensus 4 ~~i~~eG~--~gsGKsT~~~~l~~~l~~~~~~~v~~ 37 (213)
T 4tmk_A 4 KYIVIEGL--EGAGKTTARNVVVETLEQLGIRDMVF 37 (213)
T ss_dssp CEEEEEEC--TTSCHHHHHHHHHHHHHHTTCCCEEE
T ss_pred eEEEEECC--CCCCHHHHHHHHHHHHHHcCCCccee
Confidence 58999984 899999999999999999998 6543
No 274
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=35.21 E-value=24 Score=33.92 Aligned_cols=31 Identities=26% Similarity=0.507 Sum_probs=23.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k 38 (599)
|-++||||- +|||+.+ .+.|-.+|++|...=
T Consensus 13 k~vlVTGas-~gIG~ai-----a~~l~~~G~~V~~~~ 43 (252)
T 3f1l_A 13 RIILVTGAS-DGIGREA-----AMTYARYGATVILLG 43 (252)
T ss_dssp CEEEEESTT-SHHHHHH-----HHHHHHTTCEEEEEE
T ss_pred CEEEEeCCC-ChHHHHH-----HHHHHHCCCEEEEEe
Confidence 689999985 7888754 456777899987753
No 275
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=35.17 E-value=24 Score=33.22 Aligned_cols=33 Identities=39% Similarity=0.627 Sum_probs=23.9
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~d 40 (599)
|.|+||||- +|||+.++ +.|..+|++|...-.+
T Consensus 8 k~vlITGas-ggiG~~~a-----~~l~~~G~~V~~~~r~ 40 (244)
T 3d3w_A 8 RRVLVTGAG-KGIGRGTV-----QALHATGARVVAVSRT 40 (244)
T ss_dssp CEEEEESTT-SHHHHHHH-----HHHHHTTCEEEEEESC
T ss_pred cEEEEECCC-cHHHHHHH-----HHHHHCCCEEEEEeCC
Confidence 789999984 67776544 5677789998876433
No 276
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=35.16 E-value=24 Score=34.54 Aligned_cols=32 Identities=38% Similarity=0.459 Sum_probs=24.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~ 39 (599)
|.++||||- +|||+.+ .+.|..+|++|...-.
T Consensus 23 k~vlVTGas-~gIG~~i-----a~~l~~~G~~V~~~~r 54 (277)
T 2rhc_B 23 EVALVTGAT-SGIGLEI-----ARRLGKEGLRVFVCAR 54 (277)
T ss_dssp CEEEEETCS-SHHHHHH-----HHHHHHTTCEEEEEES
T ss_pred CEEEEECCC-CHHHHHH-----HHHHHHCCCEEEEEeC
Confidence 789999984 7888754 4567778998877643
No 277
>1g5t_A COB(I)alamin adenosyltransferase; P-loop protein, cobalamin biosynthesis, RECA fold; HET: ATP; 1.80A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1g5r_A* 1g64_A*
Probab=35.11 E-value=22 Score=34.23 Aligned_cols=29 Identities=31% Similarity=0.471 Sum_probs=24.6
Q ss_pred CcchHHHHHHHHHHHHH--CCCeeEEeeecc
Q 007533 13 GLGKGVTASSIGVLLKA--CGLRVTCIKIDP 41 (599)
Q Consensus 13 ~~gkgi~~~s~g~ll~~--~g~~v~~~k~dp 41 (599)
|=|||-|.|++|..|++ +|+||-++-+++
T Consensus 36 G~GkGKTTaA~GlalRA~g~G~rV~~vQF~K 66 (196)
T 1g5t_A 36 GNGKGKTTAAFGTAARAVGHGKNVGVVQFIK 66 (196)
T ss_dssp SSSSCHHHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CCCCCHHHHHHHHHHHHHHCCCeEEEEEeeC
Confidence 45899999999998886 689999997776
No 278
>4eyg_A Twin-arginine translocation pathway signal; PSI-biology, MCSG, midwest center for structural genomics, transporter; HET: VNL; 1.86A {Rhodopseudomonas palustris} PDB: 4ey3_A* 3t0n_A* 4eyk_A*
Probab=35.09 E-value=1.4e+02 Score=29.39 Aligned_cols=92 Identities=16% Similarity=0.131 Sum_probs=50.8
Q ss_pred CCceEEEEEeecCCCc-----chHHHHHHHHHHcCC-cceeeeEEEEecCCCCCCccccCCchhhhHHHH-hc--cCCCE
Q 007533 293 HEPVRIAMVGKYTGLS-----DAYLSILKALLHASV-DLRKKLVIDWIPACDLEDATEKENPDAYKAAWK-LL--KGADG 363 (599)
Q Consensus 293 ~~~v~IaiVGkY~~l~-----DaY~SIi~AL~haG~-~~~v~v~i~wi~s~~le~~~~~~~p~~y~~a~~-~L--~~~DG 363 (599)
.++++||++...+... +....+..+++..+. -...++++.+.++.. +|+.-..+.+ .+ +++|+
T Consensus 4 ~~~i~IG~~~p~sg~~~~~g~~~~~g~~~a~~~~~~~i~G~~i~l~~~D~~~--------~~~~~~~~~~~li~~~~v~~ 75 (368)
T 4eyg_A 4 EDTFKVGLIVPMTGGQASTGKQIDNAIKLYIKKHGDTVAGKKIEVILKDDAA--------IPDNTKRLAQELIVNDKVNV 75 (368)
T ss_dssp CCEEEEEEEECSSSTTHHHHHHHHHHHHHHHHHHCSEETTEEEEEEEEECTT--------CHHHHHHHHHHHHHTSCCSE
T ss_pred CCcEEEEEEeCCcCcchhccHHHHHHHHHHHHHcCCCCCCeEEEEEEeCCCC--------CHHHHHHHHHHHHhcCCcEE
Confidence 4579999997654321 112234455665554 234566777766542 2322222222 22 58999
Q ss_pred EEeCCCCCCCchhHHHHHHHHHHHcCCCEEEEeh
Q 007533 364 ILVPGGFGNRGVQGKILAAKYAREHRIPYLGICL 397 (599)
Q Consensus 364 IlVPGGfG~rg~eg~i~aik~are~~iP~LGICL 397 (599)
||-|-+ ......++..+.+.++|++..+.
T Consensus 76 iiG~~~-----s~~~~~~~~~~~~~~ip~i~~~~ 104 (368)
T 4eyg_A 76 IAGFGI-----TPAALAAAPLATQAKVPEIVMAA 104 (368)
T ss_dssp EEECSS-----HHHHHHHHHHHHHHTCCEEESSC
T ss_pred EECCCc-----cHHHHHHHHHHHhCCceEEeccC
Confidence 884432 12234456667788999988753
No 279
>2x7x_A Sensor protein; transferase, sensor histidine kinase; HET: FRU; 2.64A {Bacteroides thetaiotaomicron}
Probab=34.98 E-value=2e+02 Score=28.01 Aligned_cols=85 Identities=14% Similarity=0.173 Sum_probs=44.6
Q ss_pred CceEEEEEeecCCCcchHH-HHHHHHHHcCCcc-eeeeEEEEecCCCCCCccccCCchhhhHHHHhc--cCCCEEEeCCC
Q 007533 294 EPVRIAMVGKYTGLSDAYL-SILKALLHASVDL-RKKLVIDWIPACDLEDATEKENPDAYKAAWKLL--KGADGILVPGG 369 (599)
Q Consensus 294 ~~v~IaiVGkY~~l~DaY~-SIi~AL~haG~~~-~v~v~i~wi~s~~le~~~~~~~p~~y~~a~~~L--~~~DGIlVPGG 369 (599)
++.+||++-. . .+.|. .+++.++.+..+. ...+.+ .++.. +++......+.+ .++||||+.+.
T Consensus 5 ~~~~Igvi~~--~-~~~~~~~~~~gi~~~a~~~~g~~l~i--~~~~~--------~~~~~~~~i~~l~~~~vdgiIi~~~ 71 (325)
T 2x7x_A 5 PHFRIGVAQC--S-DDSWRHKMNDEILREAMFYNGVSVEI--RSAGD--------DNSKQAEDVHYFMDEGVDLLIISAN 71 (325)
T ss_dssp -CCEEEEEES--C-CSHHHHHHHHHHHHHHTTSSSCEEEE--EECTT--------CHHHHHHHHHHHHHTTCSEEEECCS
T ss_pred CCeEEEEEec--C-CCHHHHHHHHHHHHHHHHcCCcEEEE--eCCCC--------CHHHHHHHHHHHHHcCCCEEEEeCC
Confidence 4568998832 2 44544 5777776654444 443333 23221 111111122222 68999999763
Q ss_pred CCCCchhHHHHHHHHHHHcCCCEEEE
Q 007533 370 FGNRGVQGKILAAKYAREHRIPYLGI 395 (599)
Q Consensus 370 fG~rg~eg~i~aik~are~~iP~LGI 395 (599)
.. +.....++.+.+.++|+.-+
T Consensus 72 ~~----~~~~~~~~~~~~~~iPvV~~ 93 (325)
T 2x7x_A 72 EA----APMTPIVEEAYQKGIPVILV 93 (325)
T ss_dssp SH----HHHHHHHHHHHHTTCCEEEE
T ss_pred CH----HHHHHHHHHHHHCCCeEEEe
Confidence 21 12234566777788998755
No 280
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=34.96 E-value=22 Score=34.45 Aligned_cols=32 Identities=31% Similarity=0.654 Sum_probs=24.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~ 39 (599)
|.++||||- +|||+.+ .+.|-.+|++|...-.
T Consensus 11 k~vlVTGas-~gIG~ai-----a~~l~~~G~~V~~~~r 42 (262)
T 3pk0_A 11 RSVVVTGGT-KGIGRGI-----ATVFARAGANVAVAGR 42 (262)
T ss_dssp CEEEETTCS-SHHHHHH-----HHHHHHTTCEEEEEES
T ss_pred CEEEEECCC-cHHHHHH-----HHHHHHCCCEEEEEeC
Confidence 789999985 7888754 4567788998877643
No 281
>2p67_A LAO/AO transport system kinase; ARGK, structural GEN PSI-2, protein structure initiative, NEW YORK SGX research for structural genomics; 1.80A {Escherichia coli} SCOP: c.37.1.10
Probab=34.92 E-value=1.5e+02 Score=29.93 Aligned_cols=40 Identities=38% Similarity=0.532 Sum_probs=34.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccc
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYL 43 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~dpyl 43 (599)
+.|.++| -.|-||=.+...+..+++..|.+|..+-.||.-
T Consensus 57 ~~i~i~G--~~g~GKSTl~~~l~~~~~~~~~~v~v~~~d~~~ 96 (341)
T 2p67_A 57 LRLGVTG--TPGAGKSTFLEAFGMLLIREGLKVAVIAVDPSS 96 (341)
T ss_dssp EEEEEEE--CTTSCHHHHHHHHHHHHHHTTCCEEEEEECCC-
T ss_pred EEEEEEc--CCCCCHHHHHHHHHHHHHhcCCeEEEEeecCCc
Confidence 4567777 899999999999999999999999999988864
No 282
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=34.91 E-value=26 Score=33.60 Aligned_cols=32 Identities=41% Similarity=0.571 Sum_probs=24.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~ 39 (599)
|-++||||- +|||+. +.+.|-++|++|...-.
T Consensus 3 k~vlVTGas-~gIG~~-----ia~~l~~~G~~V~~~~r 34 (247)
T 3dii_A 3 RGVIVTGGG-HGIGKQ-----ICLDFLEAGDKVCFIDI 34 (247)
T ss_dssp CEEEEESTT-SHHHHH-----HHHHHHHTTCEEEEEES
T ss_pred CEEEEECCC-CHHHHH-----HHHHHHHCCCEEEEEeC
Confidence 789999986 777765 45667788999987643
No 283
>2o20_A Catabolite control protein A; CCPA, transcriptional regulator, helix-turn-helix, transcrip; 1.90A {Lactococcus lactis}
Probab=34.89 E-value=1.5e+02 Score=28.94 Aligned_cols=31 Identities=23% Similarity=0.298 Sum_probs=20.0
Q ss_pred cCCCEEEeCCCCCCCchhHHHHHHHHHHHcCCCEEEE
Q 007533 359 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGI 395 (599)
Q Consensus 359 ~~~DGIlVPGGfG~rg~eg~i~aik~are~~iP~LGI 395 (599)
.++||||+.+...+ . ..++.+.+.++|+.-+
T Consensus 118 ~~vdgiI~~~~~~~---~---~~~~~l~~~~iPvV~~ 148 (332)
T 2o20_A 118 KQVDGIVYMGSSLD---E---KIRTSLKNSRTPVVLV 148 (332)
T ss_dssp TTCSEEEECSSCCC---H---HHHHHHHHHCCCEEEE
T ss_pred CCCCEEEEeCCCCC---H---HHHHHHHhCCCCEEEE
Confidence 68999999874221 1 2344555678998755
No 284
>3p32_A Probable GTPase RV1496/MT1543; structural genomics, seattle structural genomics center for infectious disease, ssgcid, MEAB, MMAA; HET: GDP PGE; 1.90A {Mycobacterium tuberculosis} PDB: 3md0_A* 4gt1_A* 3nxs_A* 3tk1_A*
Probab=34.84 E-value=49 Score=33.86 Aligned_cols=41 Identities=32% Similarity=0.509 Sum_probs=32.9
Q ss_pred EEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccccC
Q 007533 3 YVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNT 45 (599)
Q Consensus 3 ~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~dpyln~ 45 (599)
.|.+||- .|.||=.++..++..|...|.+|..+-.||.-..
T Consensus 81 ~I~i~G~--~G~GKSTl~~~L~~~l~~~g~kV~vi~~Dp~~~~ 121 (355)
T 3p32_A 81 RVGITGV--PGVGKSTAIEALGMHLIERGHRVAVLAVDPSSTR 121 (355)
T ss_dssp EEEEECC--TTSSHHHHHHHHHHHHHTTTCCEEEEEEC-----
T ss_pred EEEEECC--CCCCHHHHHHHHHHHHHhCCCceEEEecCCCCCc
Confidence 5777774 9999999999999999999999999999987664
No 285
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=34.78 E-value=28 Score=34.98 Aligned_cols=32 Identities=34% Similarity=0.532 Sum_probs=24.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~ 39 (599)
|-|+||||- ||||+.+ .+.|-.+|++|...=.
T Consensus 9 k~vlVTGas-~gIG~~l-----a~~l~~~G~~Vv~~~r 40 (319)
T 3ioy_A 9 RTAFVTGGA-NGVGIGL-----VRQLLNQGCKVAIADI 40 (319)
T ss_dssp CEEEEETTT-STHHHHH-----HHHHHHTTCEEEEEES
T ss_pred CEEEEcCCc-hHHHHHH-----HHHHHHCCCEEEEEEC
Confidence 689999997 8888754 4566678999876543
No 286
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=34.74 E-value=25 Score=33.53 Aligned_cols=31 Identities=29% Similarity=0.375 Sum_probs=23.8
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k 38 (599)
|.++||||- +|||+ ++.+.|..+|++|...-
T Consensus 10 k~vlITGas-~giG~-----~~a~~l~~~G~~V~~~~ 40 (253)
T 3qiv_A 10 KVGIVTGSG-GGIGQ-----AYAEALAREGAAVVVAD 40 (253)
T ss_dssp CEEEEETTT-SHHHH-----HHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCC-ChHHH-----HHHHHHHHCCCEEEEEc
Confidence 789999984 77776 45566778899987753
No 287
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=34.64 E-value=24 Score=34.64 Aligned_cols=31 Identities=32% Similarity=0.535 Sum_probs=24.0
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k 38 (599)
|.++||||- +|||+. +.+.|-.+|++|...-
T Consensus 28 k~vlVTGas-~GIG~a-----ia~~l~~~G~~V~~~~ 58 (277)
T 4dqx_A 28 RVCIVTGGG-SGIGRA-----TAELFAKNGAYVVVAD 58 (277)
T ss_dssp CEEEEETTT-SHHHHH-----HHHHHHHTTCEEEEEE
T ss_pred CEEEEECCC-cHHHHH-----HHHHHHHCCCEEEEEe
Confidence 789999985 788875 4566778899988753
No 288
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=34.60 E-value=27 Score=34.49 Aligned_cols=32 Identities=31% Similarity=0.608 Sum_probs=23.9
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~ 39 (599)
|.++||||- +|||+. +.+.|-.+|++|...-.
T Consensus 48 k~vlVTGas-~GIG~a-----ia~~la~~G~~V~~~~r 79 (291)
T 3ijr_A 48 KNVLITGGD-SGIGRA-----VSIAFAKEGANIAIAYL 79 (291)
T ss_dssp CEEEEETTT-SHHHHH-----HHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCC-cHHHHH-----HHHHHHHCCCEEEEEeC
Confidence 789999985 777765 45567788999877533
No 289
>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=34.56 E-value=24 Score=33.70 Aligned_cols=33 Identities=21% Similarity=0.490 Sum_probs=24.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~d 40 (599)
|.++||||- +|||+.++ +.|..+|++|...-.+
T Consensus 7 k~vlVTGas-~gIG~~ia-----~~l~~~G~~V~~~~r~ 39 (246)
T 2ag5_A 7 KVIILTAAA-QGIGQAAA-----LAFAREGAKVIATDIN 39 (246)
T ss_dssp CEEEESSTT-SHHHHHHH-----HHHHHTTCEEEEEESC
T ss_pred CEEEEeCCC-cHHHHHHH-----HHHHHCCCEEEEEECC
Confidence 789999985 77776544 5677789998876443
No 290
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=34.49 E-value=25 Score=34.02 Aligned_cols=31 Identities=42% Similarity=0.703 Sum_probs=23.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k 38 (599)
|.++||||- +|||+.++ +.|..+|++|...-
T Consensus 14 k~vlVTGas-~gIG~~ia-----~~l~~~G~~V~~~~ 44 (267)
T 1iy8_A 14 RVVLITGGG-SGLGRATA-----VRLAAEGAKLSLVD 44 (267)
T ss_dssp CEEEEETTT-SHHHHHHH-----HHHHHTTCEEEEEE
T ss_pred CEEEEECCC-CHHHHHHH-----HHHHHCCCEEEEEe
Confidence 789999984 88888654 55667899887653
No 291
>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}
Probab=34.48 E-value=23 Score=33.63 Aligned_cols=29 Identities=34% Similarity=0.496 Sum_probs=22.0
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEE
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTC 36 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~ 36 (599)
|.++||||- ||||+.+ .+.|-.+|++|..
T Consensus 8 k~vlITGas-~gIG~~~-----a~~l~~~G~~v~~ 36 (255)
T 3icc_A 8 KVALVTGAS-RGIGRAI-----AKRLANDGALVAI 36 (255)
T ss_dssp CEEEETTCS-SHHHHHH-----HHHHHHTTCEEEE
T ss_pred CEEEEECCC-ChHHHHH-----HHHHHHCCCeEEE
Confidence 789999996 7888754 4556678888765
No 292
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*
Probab=34.48 E-value=23 Score=34.32 Aligned_cols=30 Identities=30% Similarity=0.541 Sum_probs=22.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~ 37 (599)
|.++||||- +|||+.++ +.|..+|++|...
T Consensus 12 k~~lVTGas-~gIG~~ia-----~~l~~~G~~V~~~ 41 (276)
T 1mxh_A 12 PAAVITGGA-RRIGHSIA-----VRLHQQGFRVVVH 41 (276)
T ss_dssp CEEEETTCS-SHHHHHHH-----HHHHHTTCEEEEE
T ss_pred CEEEEeCCC-cHHHHHHH-----HHHHHCCCEEEEE
Confidence 679999986 78887654 4566789888764
No 293
>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}
Probab=34.46 E-value=31 Score=33.82 Aligned_cols=33 Identities=18% Similarity=0.344 Sum_probs=25.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~d 40 (599)
|.++||||- +|||+.++ +.|..+|++|...-.+
T Consensus 22 k~vlVTGas-~gIG~aia-----~~La~~G~~V~~~~r~ 54 (272)
T 2nwq_A 22 STLFITGAT-SGFGEACA-----RRFAEAGWSLVLTGRR 54 (272)
T ss_dssp CEEEESSTT-TSSHHHHH-----HHHHHTTCEEEEEESC
T ss_pred cEEEEeCCC-CHHHHHHH-----HHHHHCCCEEEEEECC
Confidence 679999984 89998654 5567789998876443
No 294
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Probab=34.44 E-value=22 Score=35.04 Aligned_cols=31 Identities=32% Similarity=0.353 Sum_probs=24.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k 38 (599)
|.++||||- +|||+.+ .+.|..+|++|.+.=
T Consensus 10 k~~lVTGas-~GIG~ai-----a~~la~~G~~V~~~~ 40 (291)
T 1e7w_A 10 PVALVTGAA-KRLGRSI-----AEGLHAEGYAVCLHY 40 (291)
T ss_dssp CEEEETTCS-SHHHHHH-----HHHHHHTTCEEEEEE
T ss_pred CEEEEECCC-chHHHHH-----HHHHHHCCCeEEEEc
Confidence 789999985 8888854 456777899987753
No 295
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=34.42 E-value=24 Score=34.91 Aligned_cols=34 Identities=24% Similarity=0.428 Sum_probs=25.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~dp 41 (599)
|.++||||- ||||+. +.+.|-.+|.+|..+-.++
T Consensus 29 k~~lVTGas-~GIG~a-----ia~~la~~G~~V~~~~~~~ 62 (299)
T 3t7c_A 29 KVAFITGAA-RGQGRS-----HAITLAREGADIIAIDVCK 62 (299)
T ss_dssp CEEEEESTT-SHHHHH-----HHHHHHHTTCEEEEEECCS
T ss_pred CEEEEECCC-CHHHHH-----HHHHHHHCCCEEEEEeccc
Confidence 789999985 788874 4566778899998765443
No 296
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=34.40 E-value=25 Score=34.38 Aligned_cols=33 Identities=30% Similarity=0.447 Sum_probs=25.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~d 40 (599)
|.++||||- ||||+. +.+.|-.+|++|...-.+
T Consensus 12 k~~lVTGas-~gIG~a-----ia~~la~~G~~V~~~~~~ 44 (286)
T 3uve_A 12 KVAFVTGAA-RGQGRS-----HAVRLAQEGADIIAVDIC 44 (286)
T ss_dssp CEEEEESTT-SHHHHH-----HHHHHHHTTCEEEEEECC
T ss_pred CEEEEeCCC-chHHHH-----HHHHHHHCCCeEEEEecc
Confidence 789999996 777764 556777889999876544
No 297
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=34.36 E-value=27 Score=34.24 Aligned_cols=30 Identities=30% Similarity=0.570 Sum_probs=23.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~ 37 (599)
|-++||||- +|||+. +.+.|..+|++|...
T Consensus 33 k~~lVTGas-~GIG~a-----ia~~la~~G~~V~~~ 62 (276)
T 3r1i_A 33 KRALITGAS-TGIGKK-----VALAYAEAGAQVAVA 62 (276)
T ss_dssp CEEEEESTT-SHHHHH-----HHHHHHHTTCEEEEE
T ss_pred CEEEEeCCC-CHHHHH-----HHHHHHHCCCEEEEE
Confidence 789999996 788875 446677889998765
No 298
>3grf_A Ornithine carbamoyltransferase; ornithine transcarbamoylase, arginine degradation pathway, giardia lamblia, drug target; 2.00A {Giardia intestinalis}
Probab=34.34 E-value=1.6e+02 Score=30.41 Aligned_cols=105 Identities=12% Similarity=0.170 Sum_probs=62.4
Q ss_pred ccCCchhhhhhhhcCCCcccEEEEecCCCCChhhhhccccCCCCCCCCeeeeCCCCCccchhHHHHHHHHHHHHHcC-CC
Q 007533 193 KTKPTQHSVRGLRGQGLTPNILACRSTVALDDNVKGKLSQFCHVPEQNIITLYDVPNIWHIPLLLRKAHEAIFKVLN-LQ 271 (599)
Q Consensus 193 ktkptq~sv~~Lrs~Gi~pd~iv~R~~~~l~~~~~~Kislfc~v~~~~Vi~~~dv~tiy~vPl~L~g~~~~i~~~l~-l~ 271 (599)
|--+...+++-|.+. .|+|++|... ...-+.+|-++.|| ||+.-| + .+|=...|--++ .|.++++ +.
T Consensus 86 kgEsl~DTarvls~~---~D~iviR~~~---~~~~~~lA~~~~vP---VINag~-~-~~HPtQaLaDl~-Ti~e~~g~~~ 153 (328)
T 3grf_A 86 GKETVQDTAEVFSRM---VDICTARLAT---KEMMREMAQHASVP---CINALD-D-FGHPLQMVCDFM-TIKEKFTAAG 153 (328)
T ss_dssp ---CHHHHHHHHTTT---CSEEEEECSS---HHHHHHHHHHCSSC---EEESSC-S-SCCHHHHHHHHH-HHHHHHHHTT
T ss_pred CCCCHHHHHHHHHhh---CCEEEEecCC---hhHHHHHHHhCCCC---EEeCCC-C-CCCcHHHHHHHH-HHHHHhCCcc
Confidence 444677777877655 7999999874 45666777777776 888877 3 555444332111 1122222 00
Q ss_pred CCCCchhhHHHHHHHhhhcCCCCceEEEEEeecCCCcchHHHHHHHHHHcCCccee
Q 007533 272 GTTKEPLLKEWTSRAEICDGLHEPVRIAMVGKYTGLSDAYLSILKALLHASVDLRK 327 (599)
Q Consensus 272 ~~~~~~~l~~W~~l~~~~~~~~~~v~IaiVGkY~~l~DaY~SIi~AL~haG~~~~v 327 (599)
.. .+..+.++||+||+-. ...-.|.+.++...|+++.+
T Consensus 154 ---------------~~-~~~l~gl~va~vGD~~--~~va~Sl~~~~~~~G~~v~~ 191 (328)
T 3grf_A 154 ---------------EF-SNGFKGIKFAYCGDSM--NNVTYDLMRGCALLGMECHV 191 (328)
T ss_dssp ---------------CC-TTTGGGCCEEEESCCS--SHHHHHHHHHHHHHTCEEEE
T ss_pred ---------------cc-ccccCCcEEEEeCCCC--cchHHHHHHHHHHcCCEEEE
Confidence 00 0012457999999742 23566888888888876644
No 299
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=34.33 E-value=22 Score=34.54 Aligned_cols=29 Identities=34% Similarity=0.678 Sum_probs=22.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEE
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTC 36 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~ 36 (599)
|.++||||- +|||+.+ .+.|-.+|++|..
T Consensus 26 k~vlITGas-~gIG~~~-----a~~l~~~G~~v~~ 54 (269)
T 3gk3_A 26 RVAFVTGGM-GGLGAAI-----SRRLHDAGMAVAV 54 (269)
T ss_dssp CEEEETTTT-SHHHHHH-----HHHHHTTTCEEEE
T ss_pred CEEEEECCC-chHHHHH-----HHHHHHCCCEEEE
Confidence 789999986 8888755 4567778988755
No 300
>2i6u_A Otcase, ornithine carbamoyltransferase; X-RAY crystallography, ornithine carbamyoltransferase, carbamoyl phosphate, L- norvaline; 2.20A {Mycobacterium tuberculosis} PDB: 2p2g_A
Probab=34.31 E-value=3.3e+02 Score=27.67 Aligned_cols=130 Identities=14% Similarity=0.182 Sum_probs=76.6
Q ss_pred hHHHHHHHhhhHcCCCCEEEEeeeeeeeecCCCccccCCchhhhhhhhcCCCcccEEEEecCCCCChhhhhccccCCCCC
Q 007533 158 PFIEALGQFSYRVGPGNFCLIHVSLVPVLNVVGEQKTKPTQHSVRGLRGQGLTPNILACRSTVALDDNVKGKLSQFCHVP 237 (599)
Q Consensus 158 pf~ea~rq~~~~~g~~n~~~ihv~~vp~~~~~~e~ktkptq~sv~~Lrs~Gi~pd~iv~R~~~~l~~~~~~Kislfc~v~ 237 (599)
-|--|++|| | .++.++-. +.+.=.|--+...+++-|.+. .|+|++|... ...-+.+|-++.+|
T Consensus 56 SFe~A~~~L----G-g~~i~l~~------~~ss~~kgEsl~DTarvls~~---~D~iviR~~~---~~~~~~lA~~~~vP 118 (307)
T 2i6u_A 56 SFELGIAQL----G-GHAVVVDS------GSTQLGRDETLQDTAKVLSRY---VDAIVWRTFG---QERLDAMASVATVP 118 (307)
T ss_dssp HHHHHHHHT----T-CEEEEEEG------GGSGGGGTCCHHHHHHHHHHH---EEEEEEECSS---HHHHHHHHHHCSSC
T ss_pred HHHHHHHHc----C-CeEEEECC------ccccCCCCCCHHHHHHHHHHh---CCEEEEecCC---hhHHHHHHhhCCCC
Confidence 466677776 4 33444321 122223555778888888776 5999999864 56666677777664
Q ss_pred CCCeeeeCCCCCccchhHHHHHHHHHHHHHcCCCCCCCchhhHHHHHHHhhhcCCCCceEEEEEeecCCCcchHHHHHHH
Q 007533 238 EQNIITLYDVPNIWHIPLLLRKAHEAIFKVLNLQGTTKEPLLKEWTSRAEICDGLHEPVRIAMVGKYTGLSDAYLSILKA 317 (599)
Q Consensus 238 ~~~Vi~~~dv~tiy~vPl~L~g~~~~i~~~l~l~~~~~~~~l~~W~~l~~~~~~~~~~v~IaiVGkY~~l~DaY~SIi~A 317 (599)
||+.- +..+|=...|--++. |.+++ . .-+.++|++||+. ....=.|.+.+
T Consensus 119 ---VINa~--~~~~HPtQaLaDl~T-i~e~~---------------------g-~l~gl~va~vGD~--~~rva~Sl~~~ 168 (307)
T 2i6u_A 119 ---VINAL--SDEFHPCQVLADLQT-IAERK---------------------G-ALRGLRLSYFGDG--ANNMAHSLLLG 168 (307)
T ss_dssp ---EEESC--CSSCCHHHHHHHHHH-HHHHH---------------------S-CCTTCEEEEESCT--TSHHHHHHHHH
T ss_pred ---EEcCC--CCCcCccHHHHHHHH-HHHHh---------------------C-CcCCeEEEEECCC--CcCcHHHHHHH
Confidence 77754 355544333311110 11111 1 1246899999984 12356788999
Q ss_pred HHHcCCcceeeeEEEEecCCCCC
Q 007533 318 LLHASVDLRKKLVIDWIPACDLE 340 (599)
Q Consensus 318 L~haG~~~~v~v~i~wi~s~~le 340 (599)
+...|+++.+ +.++.+.
T Consensus 169 ~~~~g~~v~~------~~P~~~~ 185 (307)
T 2i6u_A 169 GVTAGIHVTV------AAPEGFL 185 (307)
T ss_dssp HHHTTCEEEE------ECCTTSC
T ss_pred HHHCCCEEEE------ECCcccc
Confidence 9888887654 4555554
No 301
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=34.28 E-value=24 Score=35.01 Aligned_cols=31 Identities=29% Similarity=0.472 Sum_probs=23.8
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k 38 (599)
|.++||||- ||||+.+ .+.|-.+|++|...-
T Consensus 32 k~vlVTGas-~gIG~~l-----a~~l~~~G~~V~~~~ 62 (301)
T 3tjr_A 32 RAAVVTGGA-SGIGLAT-----ATEFARRGARLVLSD 62 (301)
T ss_dssp CEEEEETTT-SHHHHHH-----HHHHHHTTCEEEEEE
T ss_pred CEEEEeCCC-CHHHHHH-----HHHHHHCCCEEEEEE
Confidence 689999997 8888754 556777899887653
No 302
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}
Probab=34.18 E-value=28 Score=33.72 Aligned_cols=33 Identities=27% Similarity=0.440 Sum_probs=24.9
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~d 40 (599)
|-++||||- +|||+.+ .+.|..+|++|...-.+
T Consensus 29 k~vlVTGas-~gIG~ai-----a~~l~~~G~~V~~~~r~ 61 (260)
T 3un1_A 29 KVVVITGAS-QGIGAGL-----VRAYRDRNYRVVATSRS 61 (260)
T ss_dssp CEEEESSCS-SHHHHHH-----HHHHHHTTCEEEEEESS
T ss_pred CEEEEeCCC-CHHHHHH-----HHHHHHCCCEEEEEeCC
Confidence 789999986 7787644 45677889999887543
No 303
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=34.16 E-value=33 Score=31.75 Aligned_cols=34 Identities=21% Similarity=0.290 Sum_probs=25.0
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 007533 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (599)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~dp 41 (599)
|| |+||||- ++||+ .+-..|.++|++|..+-.+|
T Consensus 1 M~-ilItGat-G~iG~-----~l~~~L~~~g~~V~~~~R~~ 34 (219)
T 3dqp_A 1 MK-IFIVGST-GRVGK-----SLLKSLSTTDYQIYAGARKV 34 (219)
T ss_dssp CE-EEEESTT-SHHHH-----HHHHHHTTSSCEEEEEESSG
T ss_pred Ce-EEEECCC-CHHHH-----HHHHHHHHCCCEEEEEECCc
Confidence 66 8999975 55555 55566778899999887665
No 304
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=34.15 E-value=26 Score=33.75 Aligned_cols=33 Identities=33% Similarity=0.416 Sum_probs=24.0
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~d 40 (599)
|-++|||| -+|||+.+ .+.|..+|++|...-.+
T Consensus 10 k~vlVTGa-s~giG~~i-----a~~l~~~G~~V~~~~r~ 42 (260)
T 2ae2_A 10 CTALVTGG-SRGIGYGI-----VEELASLGASVYTCSRN 42 (260)
T ss_dssp CEEEEESC-SSHHHHHH-----HHHHHHTTCEEEEEESC
T ss_pred CEEEEECC-CcHHHHHH-----HHHHHHCCCEEEEEeCC
Confidence 78999998 47788754 45566789988776433
No 305
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=34.15 E-value=30 Score=33.04 Aligned_cols=31 Identities=23% Similarity=0.306 Sum_probs=23.9
Q ss_pred EEEEEeCCc-cCCcchHHHHHHHHHHHHHCCCeeEEe
Q 007533 2 KYVLVTGGV-VSGLGKGVTASSIGVLLKACGLRVTCI 37 (599)
Q Consensus 2 k~i~vtggv-~s~~gkgi~~~s~g~ll~~~g~~v~~~ 37 (599)
|.|+||||- -+|||+.++ +.|-.+|++|...
T Consensus 15 k~vlITGa~~~~giG~~ia-----~~l~~~G~~V~~~ 46 (271)
T 3ek2_A 15 KRILLTGLLSNRSIAYGIA-----KACKREGAELAFT 46 (271)
T ss_dssp CEEEECCCCSTTSHHHHHH-----HHHHHTTCEEEEE
T ss_pred CEEEEeCCCCCCcHHHHHH-----HHHHHcCCCEEEE
Confidence 789999995 379998654 5667789988765
No 306
>1jx6_A LUXP protein; protein-ligand complex, signaling protein; HET: AI2; 1.50A {Vibrio harveyi} SCOP: c.93.1.1 PDB: 1zhh_A* 2hj9_A*
Probab=34.08 E-value=1.6e+02 Score=28.83 Aligned_cols=90 Identities=9% Similarity=0.064 Sum_probs=42.6
Q ss_pred CCceEEEEEeecCC-CcchH-HHHHHHHHHcCCcceeeeEEEEecCCCCCCccccCCchhhhHHHHhc--cCCCEEEeCC
Q 007533 293 HEPVRIAMVGKYTG-LSDAY-LSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLL--KGADGILVPG 368 (599)
Q Consensus 293 ~~~v~IaiVGkY~~-l~DaY-~SIi~AL~haG~~~~v~v~i~wi~s~~le~~~~~~~p~~y~~a~~~L--~~~DGIlVPG 368 (599)
.++.+||++=. . +.+.| ..+++.++.+..+....+.+.+.++.. + .+++.-....+.+ .++||||+++
T Consensus 41 ~~~~~Igvi~~--~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~-~-----~~~~~~~~~i~~l~~~~vdgiIi~~ 112 (342)
T 1jx6_A 41 QRPIKISVVYP--GQQVSDYWVRNIASFEKRLYKLNINYQLNQVFTRP-N-----ADIKQQSLSLMEALKSKSDYLIFTL 112 (342)
T ss_dssp SSCEEEEEEEC--CCSSCCHHHHHHHHHHHHHHHTTCCEEEEEEECCT-T-----CCHHHHHHHHHHHHHTTCSEEEECC
T ss_pred CCceEEEEEec--CCcccHHHHHHHHHHHHHHHHcCCeEEEEecCCCC-c-----cCHHHHHHHHHHHHhcCCCEEEEeC
Confidence 45678998832 2 33343 455555554433333333333333320 0 0111111122222 5799999954
Q ss_pred CCCCCchhHHHHHHHHHHHcCCCEEEE
Q 007533 369 GFGNRGVQGKILAAKYAREHRIPYLGI 395 (599)
Q Consensus 369 GfG~rg~eg~i~aik~are~~iP~LGI 395 (599)
.. . ... ..++.+.+.++|+.-+
T Consensus 113 ~~-~-~~~---~~~~~~~~~~ip~V~~ 134 (342)
T 1jx6_A 113 DT-T-RHR---KFVEHVLDSTNTKLIL 134 (342)
T ss_dssp SS-S-TTH---HHHHHHHHHCSCEEEE
T ss_pred Ch-H-hHH---HHHHHHHHcCCCEEEE
Confidence 22 1 111 3355566778997644
No 307
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=34.05 E-value=25 Score=34.07 Aligned_cols=32 Identities=28% Similarity=0.507 Sum_probs=24.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~ 39 (599)
|.++||||- +|||+.+ .+.|-.+|++|..+-.
T Consensus 14 k~vlVTGas-~gIG~~i-----a~~l~~~G~~V~~~~r 45 (278)
T 3sx2_A 14 KVAFITGAA-RGQGRAH-----AVRLAADGADIIAVDL 45 (278)
T ss_dssp CEEEEESTT-SHHHHHH-----HHHHHHTTCEEEEEEC
T ss_pred CEEEEECCC-ChHHHHH-----HHHHHHCCCeEEEEec
Confidence 789999985 7888754 4567788999987643
No 308
>3rht_A (gatase1)-like protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.83A {Planctomyces limnophilus}
Probab=33.88 E-value=1.3e+02 Score=29.82 Aligned_cols=81 Identities=15% Similarity=0.037 Sum_probs=50.3
Q ss_pred eEEEEEeecCCCcchHHHHHHHHHHcCCcceeeeEEEEecCCCCCCccccCCchhhhHHHHhccCCCEEEeCCCCCCCch
Q 007533 296 VRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRGV 375 (599)
Q Consensus 296 v~IaiVGkY~~l~DaY~SIi~AL~haG~~~~v~v~i~wi~s~~le~~~~~~~p~~y~~a~~~L~~~DGIlVPGGfG~rg~ 375 (599)
.+|.+|+.- ...+.-..+.++|+..|+++.. ++..++.. ++ +.|.++|.||++.-....-.
T Consensus 5 ~~vLiV~g~-~~~~~a~~l~~aL~~~g~~V~~------i~~~~~~~-----~~-------~~L~~yDvIIl~d~~~~~l~ 65 (259)
T 3rht_A 5 TRVLYCGDT-SLETAAGYLAGLMTSWQWEFDY------IPSHVGLD-----VG-------ELLAKQDLVILSDYPAERMT 65 (259)
T ss_dssp -CEEEEESS-CTTTTHHHHHHHHHHTTCCCEE------ECTTSCBC-----SS-------HHHHTCSEEEEESCCGGGBC
T ss_pred ceEEEECCC-CchhHHHHHHHHHHhCCceEEE------eccccccc-----Ch-------hHHhcCCEEEEcCCccccCC
Confidence 468888621 1233456788999999998765 56555521 11 57899999999852221122
Q ss_pred hHHHHHHHHHHHcCCCEEEE
Q 007533 376 QGKILAAKYAREHRIPYLGI 395 (599)
Q Consensus 376 eg~i~aik~are~~iP~LGI 395 (599)
+....+++...+++-=++.+
T Consensus 66 ~~~~~~L~~yV~~GGgLi~~ 85 (259)
T 3rht_A 66 AQAIDQLVTMVKAGCGLVML 85 (259)
T ss_dssp HHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHHhCCeEEEe
Confidence 45566677666677555555
No 309
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=33.87 E-value=29 Score=33.02 Aligned_cols=32 Identities=28% Similarity=0.440 Sum_probs=23.8
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~ 39 (599)
|.|+||||- +|||+.+ .+.|..+|++|..+-.
T Consensus 13 k~vlVTGas-ggiG~~~-----a~~l~~~G~~V~~~~r 44 (265)
T 2o23_A 13 LVAVITGGA-SGLGLAT-----AERLVGQGASAVLLDL 44 (265)
T ss_dssp CEEEEETTT-SHHHHHH-----HHHHHHTTCEEEEEEC
T ss_pred CEEEEECCC-ChHHHHH-----HHHHHHCCCEEEEEeC
Confidence 789999994 7777754 4566778999887643
No 310
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=33.87 E-value=25 Score=34.36 Aligned_cols=30 Identities=33% Similarity=0.481 Sum_probs=22.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~ 37 (599)
|.++||||- +|||+.+ .+.|-.+|++|...
T Consensus 32 k~~lVTGas-~GIG~ai-----a~~la~~G~~V~~~ 61 (271)
T 3v2g_A 32 KTAFVTGGS-RGIGAAI-----AKRLALEGAAVALT 61 (271)
T ss_dssp CEEEEETTT-SHHHHHH-----HHHHHHTTCEEEEE
T ss_pred CEEEEeCCC-cHHHHHH-----HHHHHHCCCEEEEE
Confidence 789999985 7888754 45677789988654
No 311
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=33.84 E-value=20 Score=34.84 Aligned_cols=30 Identities=17% Similarity=0.321 Sum_probs=22.9
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~ 37 (599)
|.++||||- ||||+.+ .+.|-.+|.+|...
T Consensus 12 k~vlVTGas-~GIG~ai-----a~~la~~G~~V~~~ 41 (262)
T 3ksu_A 12 KVIVIAGGI-KNLGALT-----AKTFALESVNLVLH 41 (262)
T ss_dssp CEEEEETCS-SHHHHHH-----HHHHTTSSCEEEEE
T ss_pred CEEEEECCC-chHHHHH-----HHHHHHCCCEEEEE
Confidence 789999986 8888754 46677788887654
No 312
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=33.83 E-value=22 Score=34.61 Aligned_cols=33 Identities=24% Similarity=0.242 Sum_probs=24.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~d 40 (599)
|-++||||- +|||+. +.+.|..+|++|...-.+
T Consensus 28 k~vlVTGas-~gIG~a-----ia~~l~~~G~~V~~~~r~ 60 (260)
T 3gem_A 28 APILITGAS-QRVGLH-----CALRLLEHGHRVIISYRT 60 (260)
T ss_dssp CCEEESSTT-SHHHHH-----HHHHHHHTTCCEEEEESS
T ss_pred CEEEEECCC-CHHHHH-----HHHHHHHCCCEEEEEeCC
Confidence 679999985 777774 445677789998876443
No 313
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=33.73 E-value=26 Score=33.14 Aligned_cols=31 Identities=35% Similarity=0.433 Sum_probs=23.2
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k 38 (599)
|.++||||- +|||+. +.+.|..+|++|..+=
T Consensus 12 k~vlITGas-ggiG~~-----la~~l~~~G~~V~~~~ 42 (254)
T 2wsb_A 12 ACAAVTGAG-SGIGLE-----ICRAFAASGARLILID 42 (254)
T ss_dssp CEEEEETTT-SHHHHH-----HHHHHHHTTCEEEEEE
T ss_pred CEEEEECCC-cHHHHH-----HHHHHHHCCCEEEEEe
Confidence 689999985 777764 4556777899888763
No 314
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=33.72 E-value=24 Score=34.57 Aligned_cols=30 Identities=27% Similarity=0.464 Sum_probs=23.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~ 37 (599)
|.++||||- +|||+.++ +.|-.+|.+|...
T Consensus 29 k~~lVTGas-~GIG~aia-----~~la~~G~~V~~~ 58 (270)
T 3ftp_A 29 QVAIVTGAS-RGIGRAIA-----LELARRGAMVIGT 58 (270)
T ss_dssp CEEEETTCS-SHHHHHHH-----HHHHHTTCEEEEE
T ss_pred CEEEEECCC-CHHHHHHH-----HHHHHCCCEEEEE
Confidence 789999985 78887554 5677889988765
No 315
>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2
Probab=33.63 E-value=27 Score=33.23 Aligned_cols=30 Identities=37% Similarity=0.579 Sum_probs=22.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~ 37 (599)
|-|+||||- +|||+.+ .+.|..+|++|..+
T Consensus 15 k~vlITGas-ggiG~~~-----a~~l~~~G~~V~~~ 44 (265)
T 1h5q_A 15 KTIIVTGGN-RGIGLAF-----TRAVAAAGANVAVI 44 (265)
T ss_dssp EEEEEETTT-SHHHHHH-----HHHHHHTTEEEEEE
T ss_pred CEEEEECCC-chHHHHH-----HHHHHHCCCeEEEE
Confidence 789999984 7777654 45566789887765
No 316
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=33.54 E-value=26 Score=34.35 Aligned_cols=33 Identities=33% Similarity=0.361 Sum_probs=24.8
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~d 40 (599)
|-++||||- +|||+.+ .+.|..+|++|...-.+
T Consensus 17 k~vlVTGas-~gIG~~~-----a~~L~~~G~~V~~~~r~ 49 (291)
T 3rd5_A 17 RTVVITGAN-SGLGAVT-----ARELARRGATVIMAVRD 49 (291)
T ss_dssp CEEEEECCS-SHHHHHH-----HHHHHHTTCEEEEEESC
T ss_pred CEEEEeCCC-ChHHHHH-----HHHHHHCCCEEEEEECC
Confidence 679999997 7888654 45677889998876443
No 317
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=33.45 E-value=25 Score=33.83 Aligned_cols=31 Identities=29% Similarity=0.520 Sum_probs=23.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k 38 (599)
|.++||||- +|||+.+ .+.|..+|++|...-
T Consensus 6 k~vlVTGas-~gIG~~i-----a~~l~~~G~~V~~~~ 36 (260)
T 2qq5_A 6 QVCVVTGAS-RGIGRGI-----ALQLCKAGATVYITG 36 (260)
T ss_dssp CEEEESSTT-SHHHHHH-----HHHHHHTTCEEEEEE
T ss_pred CEEEEeCCC-chHHHHH-----HHHHHHCCCEEEEEe
Confidence 789999985 7788754 456777899887653
No 318
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=33.31 E-value=24 Score=34.18 Aligned_cols=32 Identities=31% Similarity=0.537 Sum_probs=24.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~ 39 (599)
|.++||||- +|||+.++ +.|..+|++|...=.
T Consensus 7 k~vlVTGas-~gIG~~ia-----~~l~~~G~~V~~~~r 38 (278)
T 1spx_A 7 KVAIITGSS-NGIGRATA-----VLFAREGAKVTITGR 38 (278)
T ss_dssp CEEEETTTT-SHHHHHHH-----HHHHHTTCEEEEEES
T ss_pred CEEEEeCCC-chHHHHHH-----HHHHHCCCEEEEEeC
Confidence 789999986 78887554 556778999887643
No 319
>2hsg_A Glucose-resistance amylase regulator; CCPA, transcriptional regulator, transcription regulator; 2.50A {Bacillus megaterium} SCOP: a.35.1.5 c.93.1.1 PDB: 1rzr_G 2jcg_A 1zvv_A 3oqo_A* 3oqm_A* 3oqn_A*
Probab=33.28 E-value=76 Score=31.18 Aligned_cols=31 Identities=19% Similarity=0.257 Sum_probs=20.4
Q ss_pred cCCCEEEeCCCCCCCchhHHHHHHHHHHHcCCCEEEE
Q 007533 359 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGI 395 (599)
Q Consensus 359 ~~~DGIlVPGGfG~rg~eg~i~aik~are~~iP~LGI 395 (599)
.++||||+.+...+ . ..++.+.+.++|+.-+
T Consensus 115 ~~vdgiI~~~~~~~---~---~~~~~l~~~~iPvV~~ 145 (332)
T 2hsg_A 115 KQVDGIIFMSGNVT---E---EHVEELKKSPVPVVLA 145 (332)
T ss_dssp CSSCCEEECCSSCC---H---HHHHHHTTSSSCEEEE
T ss_pred CCCcEEEEecCCCC---H---HHHHHHHhCCCCEEEE
Confidence 57999999874322 1 3455566678897755
No 320
>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2
Probab=33.27 E-value=27 Score=33.52 Aligned_cols=34 Identities=32% Similarity=0.391 Sum_probs=25.8
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~dp 41 (599)
|-|+||||- +|||+.+ .+.|..+|++|...-.++
T Consensus 20 k~vlVTGas-~gIG~~~-----a~~l~~~G~~V~~~~r~~ 53 (249)
T 1o5i_A 20 KGVLVLAAS-RGIGRAV-----ADVLSQEGAEVTICARNE 53 (249)
T ss_dssp CEEEEESCS-SHHHHHH-----HHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCC-CHHHHHH-----HHHHHHCCCEEEEEcCCH
Confidence 679999995 7888754 455677899998875554
No 321
>2iks_A DNA-binding transcriptional dual regulator; escherichia coli structural genomics, PSI-2, protein structure initiative; 1.85A {Escherichia coli}
Probab=33.11 E-value=1.1e+02 Score=29.24 Aligned_cols=85 Identities=18% Similarity=0.188 Sum_probs=41.3
Q ss_pred CceEEEEEeecCCCcchHH-HHHHHHHHcCCcceeeeEEEEecCCCCCCccccCCchhhhHHHHhc--cCCCEEEeCCCC
Q 007533 294 EPVRIAMVGKYTGLSDAYL-SILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLL--KGADGILVPGGF 370 (599)
Q Consensus 294 ~~v~IaiVGkY~~l~DaY~-SIi~AL~haG~~~~v~v~i~wi~s~~le~~~~~~~p~~y~~a~~~L--~~~DGIlVPGGf 370 (599)
++.+||++-. ...+.|. .+++.++.+..+....+.+. ++.. +++.-....+.+ .++||||+.+..
T Consensus 19 ~~~~Ig~i~~--~~~~~~~~~~~~gi~~~~~~~g~~~~~~--~~~~--------~~~~~~~~~~~l~~~~vdgii~~~~~ 86 (293)
T 2iks_A 19 RTRSIGLVIP--DLENTSYTRIANYLERQARQRGYQLLIA--CSED--------QPDNEMRCIEHLLQRQVDAIIVSTSL 86 (293)
T ss_dssp CCCEEEEEES--CSCSHHHHHHHHHHHHHHHHTTCEEEEE--ECTT--------CHHHHHHHHHHHHHTTCSEEEECCSS
T ss_pred CCcEEEEEeC--CCcCcHHHHHHHHHHHHHHHCCCEEEEE--cCCC--------CHHHHHHHHHHHHHcCCCEEEEeCCC
Confidence 4568998843 3344443 55555554433333333322 2211 111111122222 589999998743
Q ss_pred CCCchhHHHHHHHHHHHcCCCEEEE
Q 007533 371 GNRGVQGKILAAKYAREHRIPYLGI 395 (599)
Q Consensus 371 G~rg~eg~i~aik~are~~iP~LGI 395 (599)
... . ..++.+.+.++|+.-+
T Consensus 87 ~~~--~---~~~~~~~~~~iPvV~~ 106 (293)
T 2iks_A 87 PPE--H---PFYQRWANDPFPIVAL 106 (293)
T ss_dssp CTT--C---HHHHTTTTSSSCEEEE
T ss_pred CCc--H---HHHHHHHhCCCCEEEE
Confidence 221 1 2344555678887654
No 322
>2plr_A DTMP kinase, probable thymidylate kinase; TMP-binding, ATP-binding, structural GEN NPPSFA; HET: 1PE PGE EPE PG4; 1.60A {Sulfolobus tokodaii}
Probab=33.10 E-value=41 Score=30.56 Aligned_cols=30 Identities=20% Similarity=0.207 Sum_probs=25.0
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCee
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRV 34 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v 34 (599)
+.|+++|. +|-||+..|..|...|...| +|
T Consensus 5 ~~I~i~G~--~GsGKsT~~~~L~~~l~~~g-~~ 34 (213)
T 2plr_A 5 VLIAFEGI--DGSGKSSQATLLKDWIELKR-DV 34 (213)
T ss_dssp EEEEEECC--TTSSHHHHHHHHHHHHTTTS-CE
T ss_pred eEEEEEcC--CCCCHHHHHHHHHHHHhhcC-CE
Confidence 58999996 88999999999988887666 44
No 323
>1e6c_A Shikimate kinase; phosphoryl transfer, ADP, shikimate pathway, P-loop protein, transferase; 1.8A {Erwinia chrysanthemi} SCOP: c.37.1.2 PDB: 1shk_A 2shk_A*
Probab=33.10 E-value=26 Score=31.05 Aligned_cols=25 Identities=16% Similarity=0.328 Sum_probs=19.3
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHH
Q 007533 1 MKYVLVTGGVVSGLGKGVTASSIGVLL 27 (599)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~~s~g~ll 27 (599)
|+.|+++| .+|-||..+|.-+...|
T Consensus 2 ~~~I~l~G--~~GsGKsT~a~~La~~l 26 (173)
T 1e6c_A 2 TEPIFMVG--ARGCGMTTVGRELARAL 26 (173)
T ss_dssp CCCEEEES--CTTSSHHHHHHHHHHHH
T ss_pred CceEEEEC--CCCCCHHHHHHHHHHHh
Confidence 57899999 58999987776666544
No 324
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=32.95 E-value=24 Score=34.69 Aligned_cols=31 Identities=39% Similarity=0.636 Sum_probs=23.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k 38 (599)
|-++||||- +|||+.+ .+.|-.+|++|...-
T Consensus 34 k~~lVTGas-~GIG~ai-----a~~la~~G~~V~~~~ 64 (281)
T 4dry_A 34 RIALVTGGG-TGVGRGI-----AQALSAEGYSVVITG 64 (281)
T ss_dssp CEEEETTTT-SHHHHHH-----HHHHHHTTCEEEEEE
T ss_pred CEEEEeCCC-CHHHHHH-----HHHHHHCCCEEEEEE
Confidence 679999985 7888755 455667899887753
No 325
>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G
Probab=32.94 E-value=26 Score=33.00 Aligned_cols=29 Identities=38% Similarity=0.599 Sum_probs=21.9
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEE
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTC 36 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~ 36 (599)
|.|+||||- +|||+. +.+.|..+|++|..
T Consensus 2 k~vlVTGas-ggiG~~-----la~~l~~~G~~v~~ 30 (244)
T 1edo_A 2 PVVVVTGAS-RGIGKA-----IALSLGKAGCKVLV 30 (244)
T ss_dssp CEEEETTCS-SHHHHH-----HHHHHHHTTCEEEE
T ss_pred CEEEEeCCC-chHHHH-----HHHHHHHCCCEEEE
Confidence 679999985 777774 44567778998865
No 326
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=32.93 E-value=33 Score=32.99 Aligned_cols=33 Identities=27% Similarity=0.237 Sum_probs=25.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~ 39 (599)
|.++||||-=||||+. +.+.|-.+|++|..+-.
T Consensus 23 k~vlITGasg~GIG~~-----~a~~l~~~G~~V~~~~r 55 (266)
T 3o38_A 23 KVVLVTAAAGTGIGST-----TARRALLEGADVVISDY 55 (266)
T ss_dssp CEEEESSCSSSSHHHH-----HHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCCCchHHH-----HHHHHHHCCCEEEEecC
Confidence 7899999976789985 45567778998887644
No 327
>1vlv_A Otcase, ornithine carbamoyltransferase; TM1097, structural genomics, protein structure initiative, PSI, joint center for structu genomics; 2.25A {Thermotoga maritima} SCOP: c.78.1.1 c.78.1.1
Probab=32.90 E-value=2.5e+02 Score=28.85 Aligned_cols=123 Identities=15% Similarity=0.191 Sum_probs=72.7
Q ss_pred hHHHHHHHhhhHcCCCCEEEEeeeeeeeecCCCccccCCchhhhhhhhcCCCcccEEEEecCCCCChhhhhccccCCCCC
Q 007533 158 PFIEALGQFSYRVGPGNFCLIHVSLVPVLNVVGEQKTKPTQHSVRGLRGQGLTPNILACRSTVALDDNVKGKLSQFCHVP 237 (599)
Q Consensus 158 pf~ea~rq~~~~~g~~n~~~ihv~~vp~~~~~~e~ktkptq~sv~~Lrs~Gi~pd~iv~R~~~~l~~~~~~Kislfc~v~ 237 (599)
-|--|++|| | .++.++-. +.+.=.|--+...+++-|.+. .|+|++|... ...-+.+|-++.+|
T Consensus 75 SFE~A~~~L----G-g~~i~l~~------~~ss~~kgEsl~DTarvLs~~---~D~iviR~~~---~~~~~~lA~~~~vP 137 (325)
T 1vlv_A 75 AFETAFAEE----G-GHPIFLSP------NDIHLGAKESLEDTARVLGRM---VDAIMFRGYK---QETVEKLAEYSGVP 137 (325)
T ss_dssp HHHHHHHHT----T-CEEEEECT------TTCCTTTSSCHHHHHHHHHTT---CSEEEEESSC---HHHHHHHHHHHCSC
T ss_pred HHHHHHHHc----C-CeEEEECC------ccccCCCCcCHHHHHHHHHHh---CCEEEEECCC---hHHHHHHHHhCCCC
Confidence 466677765 4 33443321 122223555788888888777 5999999864 55566677666665
Q ss_pred CCCeeeeCCCCCccchhHHHHHHHHHHHHHcCCCCCCCchhhHHHHHHHhhhcCCCCceEEEEEeecCCCcchHHHHHHH
Q 007533 238 EQNIITLYDVPNIWHIPLLLRKAHEAIFKVLNLQGTTKEPLLKEWTSRAEICDGLHEPVRIAMVGKYTGLSDAYLSILKA 317 (599)
Q Consensus 238 ~~~Vi~~~dv~tiy~vPl~L~g~~~~i~~~l~l~~~~~~~~l~~W~~l~~~~~~~~~~v~IaiVGkY~~l~DaY~SIi~A 317 (599)
||+.-| ..+|=...|- +.+ .-|+ ... .-+.++|++||+- ....=.|.+.+
T Consensus 138 ---VINa~~--~~~HPtQaLa---Dl~---------------Ti~e----~~g-~l~gl~va~vGD~--~~rva~Sl~~~ 187 (325)
T 1vlv_A 138 ---VYNGLT--DEFHPTQALA---DLM---------------TIEE----NFG-RLKGVKVVFMGDT--RNNVATSLMIA 187 (325)
T ss_dssp ---EEESCC--SSCCHHHHHH---HHH---------------HHHH----HHS-CSTTCEEEEESCT--TSHHHHHHHHH
T ss_pred ---EEeCCC--CCCCcHHHHH---HHH---------------HHHH----HhC-CcCCcEEEEECCC--CcCcHHHHHHH
Confidence 777654 3554433331 111 0111 111 1246899999983 22356788999
Q ss_pred HHHcCCccee
Q 007533 318 LLHASVDLRK 327 (599)
Q Consensus 318 L~haG~~~~v 327 (599)
|...|+++.+
T Consensus 188 ~~~~G~~v~~ 197 (325)
T 1vlv_A 188 CAKMGMNFVA 197 (325)
T ss_dssp HHHTTCEEEE
T ss_pred HHHCCCEEEE
Confidence 9888887654
No 328
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=32.87 E-value=25 Score=33.90 Aligned_cols=31 Identities=42% Similarity=0.686 Sum_probs=23.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k 38 (599)
|.++||||- +|||+. +.+.|..+|.+|...-
T Consensus 7 k~vlVTGas-~gIG~a-----ia~~l~~~G~~V~~~~ 37 (257)
T 3imf_A 7 KVVIITGGS-SGMGKG-----MATRFAKEGARVVITG 37 (257)
T ss_dssp CEEEETTTT-SHHHHH-----HHHHHHHTTCEEEEEE
T ss_pred CEEEEECCC-CHHHHH-----HHHHHHHCCCEEEEEe
Confidence 789999985 777765 4566778899987753
No 329
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=32.78 E-value=27 Score=33.53 Aligned_cols=32 Identities=28% Similarity=0.557 Sum_probs=23.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~ 39 (599)
|.++||||- +|||+.+ .+.|..+|++|...-.
T Consensus 13 k~vlVTGas-~gIG~~i-----a~~l~~~G~~V~~~~r 44 (263)
T 3ak4_A 13 RKAIVTGGS-KGIGAAI-----ARALDKAGATVAIADL 44 (263)
T ss_dssp CEEEEETTT-SHHHHHH-----HHHHHHTTCEEEEEES
T ss_pred CEEEEeCCC-ChHHHHH-----HHHHHHCCCEEEEEeC
Confidence 679999985 7777754 4567778999887543
No 330
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...
Probab=32.72 E-value=24 Score=34.52 Aligned_cols=32 Identities=28% Similarity=0.417 Sum_probs=23.8
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~ 39 (599)
|.++||||- +|||+.++ +.|-.+|++|.+.-.
T Consensus 24 k~~lVTGas-~gIG~aia-----~~L~~~G~~V~~~~r 55 (288)
T 2x9g_A 24 PAAVVTGAA-KRIGRAIA-----VKLHQTGYRVVIHYH 55 (288)
T ss_dssp CEEEETTCS-SHHHHHHH-----HHHHHHTCEEEEEES
T ss_pred CEEEEeCCC-CHHHHHHH-----HHHHHCCCeEEEEeC
Confidence 679999986 88888654 456667998876543
No 331
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=32.69 E-value=28 Score=33.28 Aligned_cols=32 Identities=34% Similarity=0.574 Sum_probs=24.2
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~ 39 (599)
|.++||||- +|||+.++ +.|..+|++|...-.
T Consensus 6 k~vlVTGas-~giG~~ia-----~~l~~~G~~V~~~~r 37 (245)
T 1uls_A 6 KAVLITGAA-HGIGRATL-----ELFAKEGARLVACDI 37 (245)
T ss_dssp CEEEEESTT-SHHHHHHH-----HHHHHTTCEEEEEES
T ss_pred CEEEEECCC-CHHHHHHH-----HHHHHCCCEEEEEeC
Confidence 789999984 78887654 556778999887643
No 332
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=32.63 E-value=28 Score=34.34 Aligned_cols=31 Identities=32% Similarity=0.536 Sum_probs=23.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k 38 (599)
|.++||||- +|||+.+ .+.|..+|++|...-
T Consensus 29 k~~lVTGas-~GIG~ai-----a~~la~~G~~V~~~~ 59 (283)
T 3v8b_A 29 PVALITGAG-SGIGRAT-----ALALAADGVTVGALG 59 (283)
T ss_dssp CEEEEESCS-SHHHHHH-----HHHHHHTTCEEEEEE
T ss_pred CEEEEECCC-CHHHHHH-----HHHHHHCCCEEEEEe
Confidence 679999985 7777654 466777899887653
No 333
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=32.56 E-value=28 Score=33.40 Aligned_cols=31 Identities=35% Similarity=0.520 Sum_probs=23.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k 38 (599)
|.++||||- +|||+.+ .+.|..+|++|...-
T Consensus 3 k~vlVTGas-~gIG~~i-----a~~l~~~G~~V~~~~ 33 (256)
T 1geg_A 3 KVALVTGAG-QGIGKAI-----ALRLVKDGFAVAIAD 33 (256)
T ss_dssp CEEEEETTT-SHHHHHH-----HHHHHHTTCEEEEEE
T ss_pred CEEEEECCC-ChHHHHH-----HHHHHHCCCEEEEEe
Confidence 789999985 7788754 456777899887653
No 334
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=32.56 E-value=28 Score=33.51 Aligned_cols=32 Identities=28% Similarity=0.439 Sum_probs=24.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~ 39 (599)
|-++||||- +|||+. +.+.|..+|++|...-.
T Consensus 9 k~vlVTGas-~gIG~~-----ia~~l~~~G~~V~~~~r 40 (259)
T 4e6p_A 9 KSALITGSA-RGIGRA-----FAEAYVREGATVAIADI 40 (259)
T ss_dssp CEEEEETCS-SHHHHH-----HHHHHHHTTCEEEEEES
T ss_pred CEEEEECCC-cHHHHH-----HHHHHHHCCCEEEEEeC
Confidence 779999985 778775 44667788999887643
No 335
>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*
Probab=32.44 E-value=31 Score=34.07 Aligned_cols=30 Identities=33% Similarity=0.481 Sum_probs=23.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~ 37 (599)
|-++||||- ||||+.+ ...|-..|.+|...
T Consensus 8 KvalVTGas-~GIG~ai-----a~~la~~Ga~Vv~~ 37 (258)
T 4gkb_A 8 KVVIVTGGA-SGIGGAI-----SMRLAEERAIPVVF 37 (258)
T ss_dssp CEEEEETTT-SHHHHHH-----HHHHHHTTCEEEEE
T ss_pred CEEEEeCCC-CHHHHHH-----HHHHHHcCCEEEEE
Confidence 789999985 8999865 46677888887664
No 336
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=32.42 E-value=28 Score=33.35 Aligned_cols=30 Identities=37% Similarity=0.588 Sum_probs=22.9
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~ 37 (599)
|-++||||- +|||+.+ .+.|..+|++|...
T Consensus 5 k~vlVTGas-~giG~~i-----a~~l~~~G~~V~~~ 34 (255)
T 2q2v_A 5 KTALVTGST-SGIGLGI-----AQVLARAGANIVLN 34 (255)
T ss_dssp CEEEESSCS-SHHHHHH-----HHHHHHTTCEEEEE
T ss_pred CEEEEeCCC-cHHHHHH-----HHHHHHCCCEEEEE
Confidence 789999985 7787754 45677789988764
No 337
>3brs_A Periplasmic binding protein/LACI transcriptional; structural genomics, protein structure initiative; 2.00A {Clostridium phytofermentans}
Probab=32.42 E-value=78 Score=30.07 Aligned_cols=33 Identities=24% Similarity=0.164 Sum_probs=21.0
Q ss_pred cCCCEEEeCCCCCCCchhHHHHHHHHHHHcCCCEEEE
Q 007533 359 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGI 395 (599)
Q Consensus 359 ~~~DGIlVPGGfG~rg~eg~i~aik~are~~iP~LGI 395 (599)
.++||||+.+...+ .. ...++.+.+.++|+.-+
T Consensus 64 ~~vdgii~~~~~~~-~~---~~~~~~~~~~~iPvV~~ 96 (289)
T 3brs_A 64 RKPDVILLAAADYE-KT---YDAAKEIKDAGIKLIVI 96 (289)
T ss_dssp TCCSEEEECCSCTT-TT---HHHHTTTGGGTCEEEEE
T ss_pred hCCCEEEEeCCChH-Hh---HHHHHHHHHCCCcEEEE
Confidence 68999999874332 11 23455566678887655
No 338
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=32.37 E-value=43 Score=32.55 Aligned_cols=33 Identities=30% Similarity=0.427 Sum_probs=24.8
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 007533 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (599)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~d 40 (599)
|| |+||||- |-+.+.+-..|..+|++|..+-.+
T Consensus 1 m~-vlVtGat------G~iG~~l~~~L~~~g~~V~~~~r~ 33 (312)
T 3ko8_A 1 MR-IVVTGGA------GFIGSHLVDKLVELGYEVVVVDNL 33 (312)
T ss_dssp CE-EEEETTT------SHHHHHHHHHHHHTTCEEEEECCC
T ss_pred CE-EEEECCC------ChHHHHHHHHHHhCCCEEEEEeCC
Confidence 45 8999974 556667777888899999887443
No 339
>3v9p_A DTMP kinase, thymidylate kinase; ssgcid, STRU genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia thailandensis}
Probab=32.36 E-value=36 Score=33.06 Aligned_cols=35 Identities=23% Similarity=0.358 Sum_probs=27.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHC----CCeeEEee
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKAC----GLRVTCIK 38 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~----g~~v~~~k 38 (599)
++|++.| ++|-||+..+.-|...|+.+ |++|...+
T Consensus 26 ~~I~~eG--~~GsGKsT~~~~l~~~l~~~~~~~g~~v~~~r 64 (227)
T 3v9p_A 26 KFITFEG--IDGAGKTTHLQWFCDRLQERLGPAGRHVVVTR 64 (227)
T ss_dssp CEEEEEC--CC---CHHHHHHHHHHHHHHHGGGTCCEEEEE
T ss_pred eEEEEEC--CCCCCHHHHHHHHHHHHHhhccccceeeeeec
Confidence 5889998 58999999999999999999 99986543
No 340
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=32.30 E-value=28 Score=34.10 Aligned_cols=30 Identities=27% Similarity=0.416 Sum_probs=22.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~ 37 (599)
|-++||||- +|||+.+ .+.|-.+|.+|...
T Consensus 32 k~~lVTGas-~GIG~ai-----a~~la~~G~~V~~~ 61 (273)
T 3uf0_A 32 RTAVVTGAG-SGIGRAI-----AHGYARAGAHVLAW 61 (273)
T ss_dssp CEEEEETTT-SHHHHHH-----HHHHHHTTCEEEEE
T ss_pred CEEEEeCCC-cHHHHHH-----HHHHHHCCCEEEEE
Confidence 679999995 7888754 45677789987654
No 341
>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=32.27 E-value=28 Score=32.56 Aligned_cols=33 Identities=27% Similarity=0.294 Sum_probs=24.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCC--CeeEEeeec
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACG--LRVTCIKID 40 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g--~~v~~~k~d 40 (599)
|.|+||||- +|||+.+ .+.|..+| ++|..+-.+
T Consensus 4 k~vlItGas-ggiG~~l-----a~~l~~~g~~~~V~~~~r~ 38 (250)
T 1yo6_A 4 GSVVVTGAN-RGIGLGL-----VQQLVKDKNIRHIIATARD 38 (250)
T ss_dssp SEEEESSCS-SHHHHHH-----HHHHHTCTTCCEEEEEESS
T ss_pred CEEEEecCC-chHHHHH-----HHHHHhcCCCcEEEEEecC
Confidence 689999984 7787754 45566788 888776544
No 342
>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2
Probab=32.27 E-value=28 Score=33.90 Aligned_cols=33 Identities=39% Similarity=0.568 Sum_probs=24.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~d 40 (599)
|.++||||- +|||+.+ .+.|..+|++|...-.+
T Consensus 10 k~vlVTGas-~gIG~~i-----a~~l~~~G~~V~~~~r~ 42 (270)
T 1yde_A 10 KVVVVTGGG-RGIGAGI-----VRAFVNSGARVVICDKD 42 (270)
T ss_dssp CEEEEETCS-SHHHHHH-----HHHHHHTTCEEEEEESC
T ss_pred CEEEEECCC-cHHHHHH-----HHHHHHCCCEEEEEeCC
Confidence 689999985 7777754 45677789998876433
No 343
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=32.18 E-value=28 Score=34.46 Aligned_cols=32 Identities=28% Similarity=0.465 Sum_probs=24.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~ 39 (599)
|-++||||- ||||+.++ +.|-..|.+|...-.
T Consensus 8 KvalVTGas-~GIG~aiA-----~~la~~Ga~Vv~~~~ 39 (254)
T 4fn4_A 8 KVVIVTGAG-SGIGRAIA-----KKFALNDSIVVAVEL 39 (254)
T ss_dssp CEEEEETTT-SHHHHHHH-----HHHHHTTCEEEEEES
T ss_pred CEEEEeCCC-CHHHHHHH-----HHHHHcCCEEEEEEC
Confidence 789999974 78888654 567788998876544
No 344
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=32.07 E-value=28 Score=33.93 Aligned_cols=33 Identities=42% Similarity=0.614 Sum_probs=24.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~d 40 (599)
|-++||||- +|||+. +.+.|-.+|++|...-.+
T Consensus 12 k~vlVTGas-~gIG~a-----ia~~l~~~G~~V~~~~r~ 44 (281)
T 3svt_A 12 RTYLVTGGG-SGIGKG-----VAAGLVAAGASVMIVGRN 44 (281)
T ss_dssp CEEEEETTT-SHHHHH-----HHHHHHHTTCEEEEEESC
T ss_pred CEEEEeCCC-cHHHHH-----HHHHHHHCCCEEEEEeCC
Confidence 679999984 788875 446677889988776433
No 345
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=32.01 E-value=29 Score=33.39 Aligned_cols=31 Identities=35% Similarity=0.470 Sum_probs=23.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k 38 (599)
|-++||||- +|||+.+ .+.|..+|++|...=
T Consensus 8 k~vlVTGas-~gIG~~i-----a~~l~~~G~~V~~~~ 38 (260)
T 2z1n_A 8 KLAVVTAGS-SGLGFAS-----ALELARNGARLLLFS 38 (260)
T ss_dssp CEEEEETTT-SHHHHHH-----HHHHHHTTCEEEEEE
T ss_pred CEEEEECCC-chHHHHH-----HHHHHHCCCEEEEEe
Confidence 689999985 7787654 455677899887653
No 346
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=32.00 E-value=28 Score=33.27 Aligned_cols=29 Identities=34% Similarity=0.594 Sum_probs=22.2
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEE
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTC 36 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~ 36 (599)
|-++||||- +|||+.+ .+.|-.+|.+|..
T Consensus 5 k~~lVTGas-~gIG~~i-----a~~l~~~G~~V~~ 33 (246)
T 3osu_A 5 KSALVTGAS-RGIGRSI-----ALQLAEEGYNVAV 33 (246)
T ss_dssp CEEEETTCS-SHHHHHH-----HHHHHHTTCEEEE
T ss_pred CEEEEECCC-ChHHHHH-----HHHHHHCCCEEEE
Confidence 789999985 7888754 4567778988765
No 347
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=32.00 E-value=30 Score=34.00 Aligned_cols=29 Identities=31% Similarity=0.513 Sum_probs=22.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEE
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTC 36 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~ 36 (599)
|-++||||- +|||+. +.+.|-.+|++|..
T Consensus 26 k~~lVTGas-~GIG~~-----ia~~la~~G~~V~~ 54 (281)
T 3v2h_A 26 KTAVITGST-SGIGLA-----IARTLAKAGANIVL 54 (281)
T ss_dssp CEEEEETCS-SHHHHH-----HHHHHHHTTCEEEE
T ss_pred CEEEEeCCC-cHHHHH-----HHHHHHHCCCEEEE
Confidence 789999985 777774 45667788998875
No 348
>3d6n_B Aspartate carbamoyltransferase; reactor, chamber, pores, internal cavity, hydrolase, metal-B pyrimidine biosynthesis, hydrolase-transferase; HET: FLC; 2.30A {Aquifex aeolicus}
Probab=31.91 E-value=1.8e+02 Score=29.49 Aligned_cols=159 Identities=14% Similarity=0.071 Sum_probs=83.1
Q ss_pred hHHHHHHHhhhHcCCCCEEEEeeeeeeeecCCCccccCCchhhhhhhhcCCCcccEEEEecCCCCChhhhhc-cccCCCC
Q 007533 158 PFIEALGQFSYRVGPGNFCLIHVSLVPVLNVVGEQKTKPTQHSVRGLRGQGLTPNILACRSTVALDDNVKGK-LSQFCHV 236 (599)
Q Consensus 158 pf~ea~rq~~~~~g~~n~~~ihv~~vp~~~~~~e~ktkptq~sv~~Lrs~Gi~pd~iv~R~~~~l~~~~~~K-islfc~v 236 (599)
-|--|++|| | .++.++- .+.+.=.|--+....++-|.+.+ +|+|++|....=. -+. +|-++.+
T Consensus 51 SFe~A~~~L----G-g~~i~l~------~~~ss~~kgEsl~DTarvls~~~--~D~iviR~~~~~~---~~~~la~~~~v 114 (291)
T 3d6n_B 51 SFEKAAREL----G-IETYLVS------GSESSTVKGESFFDTLKTFEGLG--FDYVVFRVPFVFF---PYKEIVKSLNL 114 (291)
T ss_dssp HHHHHHHHT----T-CEEEEEE------TTTTSCCTTCCHHHHHHHHHHTT--CSEEEEEESSCCC---SCHHHHHTCSS
T ss_pred HHHHHHHHh----C-CeEEEEC------CccCcccCCCcHHHHHHHHHHhc--CCEEEEEcCChHH---HHHHHHHhCCC
Confidence 466677665 4 2344332 12223335557888888887765 5999999875322 333 4555555
Q ss_pred CCCCeeeeCCCCCccchhHHHHHHHHHHHHHcCCCCCCCchhhHHHHHHHhhhcCCCCceEEEEEeecCCCcchHHHHHH
Q 007533 237 PEQNIITLYDVPNIWHIPLLLRKAHEAIFKVLNLQGTTKEPLLKEWTSRAEICDGLHEPVRIAMVGKYTGLSDAYLSILK 316 (599)
Q Consensus 237 ~~~~Vi~~~dv~tiy~vPl~L~g~~~~i~~~l~l~~~~~~~~l~~W~~l~~~~~~~~~~v~IaiVGkY~~l~DaY~SIi~ 316 (599)
| ||+.-|-+. +|=...| .+.. .-|+ ... .-+.++|++||+-.. ...-.|.+.
T Consensus 115 P---VINAG~g~~-~HPtQaL---aDl~---------------Ti~e----~~g-~l~gl~va~vGDl~~-~rva~Sl~~ 166 (291)
T 3d6n_B 115 R---LVNAGDGTH-QHPSQGL---IDFF---------------TIKE----HFG-EVKDLRVLYVGDIKH-SRVFRSGAP 166 (291)
T ss_dssp E---EEEEEETTT-BCHHHHH---HHHH---------------HHHH----HHS-CCTTCEEEEESCCTT-CHHHHHHHH
T ss_pred C---EEeCccCCC-cCcHHHH---HHHH---------------HHHH----HhC-CcCCcEEEEECCCCC-CchHHHHHH
Confidence 4 666433332 2332222 1111 0011 111 224689999998221 225679999
Q ss_pred HHHHcCCcceeeeEEEEecCCCCCCccccC-CchhhhHHHHhccCCCEEEe
Q 007533 317 ALLHASVDLRKKLVIDWIPACDLEDATEKE-NPDAYKAAWKLLKGADGILV 366 (599)
Q Consensus 317 AL~haG~~~~v~v~i~wi~s~~le~~~~~~-~p~~y~~a~~~L~~~DGIlV 366 (599)
++...|+++.+ +.++.+.+...++ .-..++...+.++++|-|..
T Consensus 167 ~~~~~g~~v~~------~~P~~~~p~~~~~~g~~~~~d~~eav~~aDvvy~ 211 (291)
T 3d6n_B 167 LLNMFGAKIGV------CGPKTLIPRDVEVFKVDVFDDVDKGIDWADVVIW 211 (291)
T ss_dssp HHHHTTCEEEE------ESCGGGSCTTGGGGCEEEESSHHHHHHHCSEEEE
T ss_pred HHHHCCCEEEE------ECCchhCCchHHHCCCEEEcCHHHHhCCCCEEEE
Confidence 99999987655 3333333221100 01112334456778887776
No 349
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=31.77 E-value=23 Score=34.92 Aligned_cols=31 Identities=32% Similarity=0.568 Sum_probs=23.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k 38 (599)
|.++||||- ||||+. +.+.|-.+|++|.+.-
T Consensus 9 k~vlVTGas-~GIG~a-----ia~~la~~G~~V~~~~ 39 (280)
T 3tox_A 9 KIAIVTGAS-SGIGRA-----AALLFAREGAKVVVTA 39 (280)
T ss_dssp CEEEESSTT-SHHHHH-----HHHHHHHTTCEEEECC
T ss_pred CEEEEECCC-cHHHHH-----HHHHHHHCCCEEEEEE
Confidence 679999985 788875 4456777899887653
No 350
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=31.72 E-value=30 Score=34.02 Aligned_cols=33 Identities=24% Similarity=0.461 Sum_probs=24.8
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~d 40 (599)
|.++||||- ||||+.+ .+.|-.+|++|...=.+
T Consensus 10 k~vlVTGas-~GIG~ai-----a~~l~~~G~~V~~~~r~ 42 (285)
T 3sc4_A 10 KTMFISGGS-RGIGLAI-----AKRVAADGANVALVAKS 42 (285)
T ss_dssp CEEEEESCS-SHHHHHH-----HHHHHTTTCEEEEEESC
T ss_pred CEEEEECCC-CHHHHHH-----HHHHHHCCCEEEEEECC
Confidence 789999986 8888754 56677889988776443
No 351
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=31.70 E-value=30 Score=34.25 Aligned_cols=30 Identities=43% Similarity=0.725 Sum_probs=24.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~ 37 (599)
|-++||||- ||||+.+ .+.|-..|.+|.+.
T Consensus 10 KvalVTGas-~GIG~ai-----A~~la~~Ga~Vvi~ 39 (247)
T 4hp8_A 10 RKALVTGAN-TGLGQAI-----AVGLAAAGAEVVCA 39 (247)
T ss_dssp CEEEETTTT-SHHHHHH-----HHHHHHTTCEEEEE
T ss_pred CEEEEeCcC-CHHHHHH-----HHHHHHcCCEEEEE
Confidence 679999985 8999865 47788999999764
No 352
>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}
Probab=31.56 E-value=35 Score=33.94 Aligned_cols=32 Identities=34% Similarity=0.451 Sum_probs=25.6
Q ss_pred EEEEEeCCc-cCCcchHHHHHHHHHHHHHCCCeeEEee
Q 007533 2 KYVLVTGGV-VSGLGKGVTASSIGVLLKACGLRVTCIK 38 (599)
Q Consensus 2 k~i~vtggv-~s~~gkgi~~~s~g~ll~~~g~~v~~~k 38 (599)
|.++||||- -+|||+.++ +.|-.+|++|.+.-
T Consensus 10 k~~lVTGa~~s~GIG~aia-----~~la~~G~~Vv~~~ 42 (319)
T 2ptg_A 10 KTAFVAGVADSNGYGWAIC-----KLLRAAGARVLVGT 42 (319)
T ss_dssp CEEEEECCCCTTSHHHHHH-----HHHHHTTCEEEEEE
T ss_pred CEEEEeCCCCCCcHHHHHH-----HHHHHCCCEEEEEe
Confidence 689999995 899998654 55777899988764
No 353
>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*
Probab=31.52 E-value=28 Score=34.43 Aligned_cols=31 Identities=29% Similarity=0.382 Sum_probs=24.9
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k 38 (599)
|-++||||- ||||+. +.+.|-..|.+|...-
T Consensus 12 K~alVTGas-~GIG~a-----ia~~la~~Ga~V~~~~ 42 (261)
T 4h15_A 12 KRALITAGT-KGAGAA-----TVSLFLELGAQVLTTA 42 (261)
T ss_dssp CEEEESCCS-SHHHHH-----HHHHHHHTTCEEEEEE
T ss_pred CEEEEeccC-cHHHHH-----HHHHHHHcCCEEEEEE
Confidence 789999984 888875 4567889999997653
No 354
>2r8r_A Sensor protein; KDPD, PFAM02702, MCSG, structural genomics, protein structure initiative, midwest center for structural genomics, kinase; 2.30A {Pseudomonas syringae PV}
Probab=31.49 E-value=39 Score=33.27 Aligned_cols=32 Identities=19% Similarity=0.191 Sum_probs=29.9
Q ss_pred cCCcchHHHHHHHHHHHHHCCCeeEEeeeccc
Q 007533 11 VSGLGKGVTASSIGVLLKACGLRVTCIKIDPY 42 (599)
Q Consensus 11 ~s~~gkgi~~~s~g~ll~~~g~~v~~~k~dpy 42 (599)
-.|.||=.+|..+|..|..+|++|-.+-+||-
T Consensus 14 kgGvGKTt~a~~la~~l~~~G~~V~v~d~D~q 45 (228)
T 2r8r_A 14 APGVGKTYAMLQAAHAQLRQGVRVMAGVVETH 45 (228)
T ss_dssp STTSSHHHHHHHHHHHHHHTTCCEEEEECCCT
T ss_pred CCCCcHHHHHHHHHHHHHHCCCCEEEEEeCCC
Confidence 47999999999999999999999999999985
No 355
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=31.44 E-value=30 Score=33.44 Aligned_cols=30 Identities=17% Similarity=0.354 Sum_probs=22.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~ 37 (599)
|-++||||- ||||+. +.+.|-.+|++|...
T Consensus 9 k~vlVTGas-~GIG~a-----ia~~la~~G~~V~~~ 38 (259)
T 3edm_A 9 RTIVVAGAG-RDIGRA-----CAIRFAQEGANVVLT 38 (259)
T ss_dssp CEEEEETTT-SHHHHH-----HHHHHHHTTCEEEEE
T ss_pred CEEEEECCC-chHHHH-----HHHHHHHCCCEEEEE
Confidence 689999985 778775 445677789987654
No 356
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=31.43 E-value=27 Score=33.83 Aligned_cols=30 Identities=40% Similarity=0.561 Sum_probs=22.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~ 37 (599)
|.|+||||- +|||+. +.+.|-.+|++|..+
T Consensus 30 k~vlITGas-~gIG~~-----la~~l~~~G~~V~~~ 59 (271)
T 4iin_A 30 KNVLITGAS-KGIGAE-----IAKTLASMGLKVWIN 59 (271)
T ss_dssp CEEEETTCS-SHHHHH-----HHHHHHHTTCEEEEE
T ss_pred CEEEEECCC-cHHHHH-----HHHHHHHCCCEEEEE
Confidence 679999985 777764 445666789887764
No 357
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=31.42 E-value=28 Score=33.80 Aligned_cols=29 Identities=41% Similarity=0.568 Sum_probs=22.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEE
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTC 36 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~ 36 (599)
|-++||||- +|||+.+ .+.|..+|++|..
T Consensus 19 k~~lVTGas-~gIG~ai-----a~~l~~~G~~V~~ 47 (270)
T 3is3_A 19 KVALVTGSG-RGIGAAV-----AVHLGRLGAKVVV 47 (270)
T ss_dssp CEEEESCTT-SHHHHHH-----HHHHHHTTCEEEE
T ss_pred CEEEEECCC-chHHHHH-----HHHHHHCCCEEEE
Confidence 789999985 7888754 4667788988865
No 358
>3h75_A Periplasmic sugar-binding domain protein; protein structure initiative II (PSI II), sugar binding PROT alpha/beta fold; 1.60A {Pseudomonas fluorescens pf-5}
Probab=31.36 E-value=48 Score=32.90 Aligned_cols=85 Identities=16% Similarity=0.134 Sum_probs=45.6
Q ss_pred ceEEEEEeecCCCcc-hH-HHHHHHHHHcCCcceeeeEEEEecCCCCCCccccCCchhhhH-HHHhc---cCCCEEEeCC
Q 007533 295 PVRIAMVGKYTGLSD-AY-LSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKA-AWKLL---KGADGILVPG 368 (599)
Q Consensus 295 ~v~IaiVGkY~~l~D-aY-~SIi~AL~haG~~~~v~v~i~wi~s~~le~~~~~~~p~~y~~-a~~~L---~~~DGIlVPG 368 (599)
..+|+++- ....+ .| ..+.+.++.+..+....+.+. ++.. +++.-.+ +...+ .++||||+.+
T Consensus 3 ~~~Ig~i~--p~~~~~~f~~~~~~g~~~~a~~~g~~~~~~--~~~~--------~~~~~~~~i~~~i~~~~~vDgiIi~~ 70 (350)
T 3h75_A 3 LTSVVFLN--PGNSTETFWVSYSQFMQAAARDLGLDLRIL--YAER--------DPQNTLQQARELFQGRDKPDYLMLVN 70 (350)
T ss_dssp CCEEEEEE--CSCTTCHHHHHHHHHHHHHHHHHTCEEEEE--ECTT--------CHHHHHHHHHHHHHSSSCCSEEEEEC
T ss_pred CCEEEEEC--CCCCCChHHHHHHHHHHHHHHHcCCeEEEE--ECCC--------CHHHHHHHHHHHHhcCCCCCEEEEeC
Confidence 35789883 33333 44 456666666554444443333 3221 1111111 22233 3899999975
Q ss_pred CCCCCchhHHHHHHHHHHHcCCCEEEEe
Q 007533 369 GFGNRGVQGKILAAKYAREHRIPYLGIC 396 (599)
Q Consensus 369 GfG~rg~eg~i~aik~are~~iP~LGIC 396 (599)
. .. .....++.+.+.++|+.-+.
T Consensus 71 -~-~~---~~~~~~~~~~~~giPvV~~~ 93 (350)
T 3h75_A 71 -E-QY---VAPQILRLSQGSGIKLFIVN 93 (350)
T ss_dssp -C-SS---HHHHHHHHHTTSCCEEEEEE
T ss_pred -c-hh---hHHHHHHHHHhCCCcEEEEc
Confidence 1 11 23356677788899987664
No 359
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=31.29 E-value=23 Score=35.10 Aligned_cols=30 Identities=43% Similarity=0.459 Sum_probs=24.0
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~ 37 (599)
|-++||||- ||||+. +.+.|-..|.+|.+.
T Consensus 10 KvalVTGas-~GIG~a-----ia~~la~~Ga~Vvi~ 39 (255)
T 4g81_D 10 KTALVTGSA-RGLGFA-----YAEGLAAAGARVILN 39 (255)
T ss_dssp CEEEETTCS-SHHHHH-----HHHHHHHTTCEEEEC
T ss_pred CEEEEeCCC-cHHHHH-----HHHHHHHCCCEEEEE
Confidence 789999986 888876 457788899988764
No 360
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=31.23 E-value=30 Score=34.45 Aligned_cols=33 Identities=33% Similarity=0.669 Sum_probs=24.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~d 40 (599)
|-++||||- +|||+.+ .+.|..+|++|...-.+
T Consensus 42 k~vlVTGas-~GIG~ai-----a~~la~~G~~V~~~~r~ 74 (293)
T 3rih_A 42 RSVLVTGGT-KGIGRGI-----ATVFARAGANVAVAARS 74 (293)
T ss_dssp CEEEETTTT-SHHHHHH-----HHHHHHTTCEEEEEESS
T ss_pred CEEEEeCCC-cHHHHHH-----HHHHHHCCCEEEEEECC
Confidence 679999995 7888754 45677889988876443
No 361
>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=31.16 E-value=32 Score=32.07 Aligned_cols=34 Identities=44% Similarity=0.734 Sum_probs=25.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~dp 41 (599)
|-|+||||- +|||+.+ .+.|..+|++|..+-.++
T Consensus 3 k~vlVtGas-ggiG~~l-----a~~l~~~G~~V~~~~r~~ 36 (242)
T 1uay_A 3 RSALVTGGA-SGLGRAA-----ALALKARGYRVVVLDLRR 36 (242)
T ss_dssp CEEEEETTT-SHHHHHH-----HHHHHHHTCEEEEEESSC
T ss_pred CEEEEeCCC-ChHHHHH-----HHHHHHCCCEEEEEccCc
Confidence 679999985 7777654 455667899998875443
No 362
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=31.14 E-value=27 Score=35.00 Aligned_cols=30 Identities=33% Similarity=0.533 Sum_probs=23.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~ 37 (599)
|.++||||- +|||+.+ .+.|-.+|.+|.+.
T Consensus 28 k~vlVTGas-~GIG~ai-----a~~la~~G~~Vv~~ 57 (322)
T 3qlj_A 28 RVVIVTGAG-GGIGRAH-----ALAFAAEGARVVVN 57 (322)
T ss_dssp CEEEETTTT-SHHHHHH-----HHHHHHTTCEEEEE
T ss_pred CEEEEECCC-cHHHHHH-----HHHHHHCCCEEEEE
Confidence 789999986 8888754 45566789988775
No 363
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=31.04 E-value=29 Score=33.90 Aligned_cols=32 Identities=31% Similarity=0.468 Sum_probs=23.8
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~ 39 (599)
|.|+||||- +|||+-++ ..|.++|++|...-.
T Consensus 29 k~vlITGas-ggIG~~la-----~~l~~~G~~V~~~~r 60 (286)
T 1xu9_A 29 KKVIVTGAS-KGIGREMA-----YHLAKMGAHVVVTAR 60 (286)
T ss_dssp CEEEESSCS-SHHHHHHH-----HHHHHTTCEEEEEES
T ss_pred CEEEEeCCC-cHHHHHHH-----HHHHHCCCEEEEEEC
Confidence 679999985 78887554 556678998887643
No 364
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=31.01 E-value=37 Score=32.82 Aligned_cols=31 Identities=19% Similarity=0.221 Sum_probs=23.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k 38 (599)
|.++||||- +|||+.+ .+.|-.+|++|...-
T Consensus 12 k~vlVTGas-~gIG~ai-----a~~l~~~G~~V~~~~ 42 (264)
T 3ucx_A 12 KVVVISGVG-PALGTTL-----ARRCAEQGADLVLAA 42 (264)
T ss_dssp CEEEEESCC-TTHHHHH-----HHHHHHTTCEEEEEE
T ss_pred cEEEEECCC-cHHHHHH-----HHHHHHCcCEEEEEe
Confidence 789999994 7888755 455777899987653
No 365
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2
Probab=30.90 E-value=39 Score=33.28 Aligned_cols=31 Identities=26% Similarity=0.500 Sum_probs=22.0
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 007533 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (599)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~ 37 (599)
||-|+||||- |-+.+.+-..|.++|++|..+
T Consensus 1 M~~vlVTGat------G~iG~~l~~~L~~~g~~V~~~ 31 (347)
T 1orr_A 1 MAKLLITGGC------GFLGSNLASFALSQGIDLIVF 31 (347)
T ss_dssp -CEEEEETTT------SHHHHHHHHHHHHTTCEEEEE
T ss_pred CcEEEEeCCC------chhHHHHHHHHHhCCCEEEEE
Confidence 6779999973 444556666677789988865
No 366
>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}
Probab=30.87 E-value=37 Score=32.84 Aligned_cols=33 Identities=33% Similarity=0.466 Sum_probs=25.0
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~d 40 (599)
|-|+||||- +|||+. +.+.|.++|++|...-.+
T Consensus 22 k~vlVTGas-~gIG~a-----ia~~l~~~G~~V~~~~r~ 54 (253)
T 2nm0_A 22 RSVLVTGGN-RGIGLA-----IARAFADAGDKVAITYRS 54 (253)
T ss_dssp CEEEEETTT-SHHHHH-----HHHHHHHTTCEEEEEESS
T ss_pred CEEEEeCCC-CHHHHH-----HHHHHHHCCCEEEEEeCC
Confidence 779999984 788875 446677889999876544
No 367
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=30.81 E-value=31 Score=33.81 Aligned_cols=31 Identities=35% Similarity=0.407 Sum_probs=23.2
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k 38 (599)
|-++||||- +|||+.+ .+.|-.+|++|...-
T Consensus 25 k~~lVTGas-~GIG~ai-----a~~la~~G~~V~~~~ 55 (279)
T 3sju_A 25 QTAFVTGVS-SGIGLAV-----ARTLAARGIAVYGCA 55 (279)
T ss_dssp CEEEEESTT-SHHHHHH-----HHHHHHTTCEEEEEE
T ss_pred CEEEEeCCC-CHHHHHH-----HHHHHHCCCEEEEEe
Confidence 789999985 7888754 455667899887654
No 368
>2vos_A Folylpolyglutamate synthase protein FOLC; ligase, peptidoglycan synthesis, cell division; HET: ADP; 2.0A {Mycobacterium tuberculosis} PDB: 2vor_A*
Probab=30.70 E-value=44 Score=36.05 Aligned_cols=31 Identities=23% Similarity=0.231 Sum_probs=27.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEE
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTC 36 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~ 36 (599)
|.|-|||- =|||-|++=|..+|++.|++|-.
T Consensus 65 ~vI~VtGT----NGKtST~~~l~~iL~~~G~~vG~ 95 (487)
T 2vos_A 65 PSIHIAGT----NGKTSVARMVDALVTALHRRTGR 95 (487)
T ss_dssp CEEEEECS----SSHHHHHHHHHHHHHHTTCCEEE
T ss_pred eEEEEeCC----CCcHHHHHHHHHHHHHcCCCeEE
Confidence 57888885 59999999999999999999853
No 369
>3bil_A Probable LACI-family transcriptional regulator; structural genomics, unknown function, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum atcc 13032}
Probab=30.69 E-value=76 Score=31.66 Aligned_cols=31 Identities=16% Similarity=0.227 Sum_probs=19.7
Q ss_pred cCCCEEEeCCCCCCCchhHHHHHHHHHHHcCCCEEEE
Q 007533 359 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGI 395 (599)
Q Consensus 359 ~~~DGIlVPGGfG~rg~eg~i~aik~are~~iP~LGI 395 (599)
.++||||+.+...+ . ..++.+.+.++|+.-+
T Consensus 121 ~~vdgiI~~~~~~~---~---~~~~~l~~~~iPvV~i 151 (348)
T 3bil_A 121 HGVDGIICVPNEEC---A---NQLEDLQKQGMPVVLV 151 (348)
T ss_dssp TTCSCEEECCCGGG---H---HHHHHHHHC-CCEEEE
T ss_pred CCCCEEEEeCCCCC---h---HHHHHHHhCCCCEEEE
Confidence 58999999874221 1 3455666778997655
No 370
>3brq_A HTH-type transcriptional regulator ASCG; transcriptional repressor structure escherichia coli, struct genomics, PSI-2; HET: FRU; 2.00A {Escherichia coli}
Probab=30.67 E-value=1.3e+02 Score=28.52 Aligned_cols=31 Identities=16% Similarity=0.156 Sum_probs=20.9
Q ss_pred cCCCEEEeCCCCCCCchhHHHHHHHHHHH-cCCCEEEE
Q 007533 359 KGADGILVPGGFGNRGVQGKILAAKYARE-HRIPYLGI 395 (599)
Q Consensus 359 ~~~DGIlVPGGfG~rg~eg~i~aik~are-~~iP~LGI 395 (599)
.++||||+.+...+ . ..++.+.+ .++|+.-+
T Consensus 76 ~~vdgii~~~~~~~---~---~~~~~l~~~~~iPvV~~ 107 (296)
T 3brq_A 76 LRCDAIMIYPRFLS---V---DEIDDIIDAHSQPIMVL 107 (296)
T ss_dssp TTCSEEEEECSSSC---H---HHHHHHHHTCSSCEEEE
T ss_pred cCCCEEEEecCCCC---h---HHHHHHHhcCCCCEEEE
Confidence 58999999764321 1 33456667 79998765
No 371
>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}
Probab=30.63 E-value=27 Score=34.02 Aligned_cols=31 Identities=39% Similarity=0.614 Sum_probs=23.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k 38 (599)
|-++||||- +|||+. +.+.|..+|++|...-
T Consensus 29 k~vlVTGas-~gIG~a-----ia~~la~~G~~V~~~~ 59 (266)
T 3uxy_A 29 KVALVTGAA-GGIGGA-----VVTALRAAGARVAVAD 59 (266)
T ss_dssp CEEEESSTT-SHHHHH-----HHHHHHHTTCEEEECS
T ss_pred CEEEEeCCC-cHHHHH-----HHHHHHHCCCEEEEEe
Confidence 679999985 777764 4566778899998753
No 372
>2w37_A Ornithine carbamoyltransferase, catabolic; transcarbamylase, metal binding-site, hexamer, cytoplasm, arginine metabolism; 2.10A {Lactobacillus hilgardii}
Probab=30.61 E-value=2.9e+02 Score=28.93 Aligned_cols=100 Identities=14% Similarity=0.148 Sum_probs=63.4
Q ss_pred cccCCchhhhhhhhcCCCcccEEEEecCCCCChhhhhccccCCCCCCCCeeeeCCCCCccchhHHHHHHHHHHHHHcCCC
Q 007533 192 QKTKPTQHSVRGLRGQGLTPNILACRSTVALDDNVKGKLSQFCHVPEQNIITLYDVPNIWHIPLLLRKAHEAIFKVLNLQ 271 (599)
Q Consensus 192 ~ktkptq~sv~~Lrs~Gi~pd~iv~R~~~~l~~~~~~Kislfc~v~~~~Vi~~~dv~tiy~vPl~L~g~~~~i~~~l~l~ 271 (599)
.|--+...+++-|.+. .|+|++|.. ....-+.+|-++.|| ||+.-+ ..+|=...|--++. |.++++
T Consensus 107 ~kgEsl~DTarvLs~~---~D~IviR~~---~~~~~~~lA~~s~vP---VINa~~--~~~HPtQaLaDl~T-i~E~~g-- 172 (359)
T 2w37_A 107 GKKESTSDTAKVLGSM---FDGIEFRGF---KQSDAEILARDSGVP---VWNGLT--DEWHPTQMLADFMT-VKENFG-- 172 (359)
T ss_dssp TTSSCHHHHHHHHHHH---CSEEEEESS---CHHHHHHHHHHSSSC---EEEEEC--SSCCHHHHHHHHHH-HHHHHS--
T ss_pred CCCcCHHHHHHHHHHh---cCEEEEecC---ChHHHHHHHHhCCCC---EEcCCC--CCCCccHHHHHHHH-HHHHhC--
Confidence 3545778888888776 599999986 466677777777775 777654 55554433311110 111111
Q ss_pred CCCCchhhHHHHHHHhhhcCCCCceEEEEEeecCCCcchHHHHHHHHHHcCCccee
Q 007533 272 GTTKEPLLKEWTSRAEICDGLHEPVRIAMVGKYTGLSDAYLSILKALLHASVDLRK 327 (599)
Q Consensus 272 ~~~~~~~l~~W~~l~~~~~~~~~~v~IaiVGkY~~l~DaY~SIi~AL~haG~~~~v 327 (599)
.-+.++|++||+- ....=.|.+.++...|+++.+
T Consensus 173 --------------------~l~gl~va~vGD~--~~rva~Sl~~~~~~lG~~v~~ 206 (359)
T 2w37_A 173 --------------------KLQGLTLTFMGDG--RNNVANSLLVTGAILGVNIHI 206 (359)
T ss_dssp --------------------CCTTCEEEEESCT--TSHHHHHHHHHHHHHTCEEEE
T ss_pred --------------------CcCCeEEEEECCC--ccchHHHHHHHHHHcCCEEEE
Confidence 1246899999984 123556888888888877654
No 373
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=30.58 E-value=49 Score=30.54 Aligned_cols=35 Identities=23% Similarity=0.339 Sum_probs=27.8
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 007533 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (599)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~dp 41 (599)
||-|+||||- |-+.+.+-..|.++|++|..+-.+|
T Consensus 4 m~~ilItGat------G~iG~~l~~~L~~~g~~V~~~~r~~ 38 (227)
T 3dhn_A 4 VKKIVLIGAS------GFVGSALLNEALNRGFEVTAVVRHP 38 (227)
T ss_dssp CCEEEEETCC------HHHHHHHHHHHHTTTCEEEEECSCG
T ss_pred CCEEEEEcCC------chHHHHHHHHHHHCCCEEEEEEcCc
Confidence 4669999975 7777788888989999998876553
No 374
>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A
Probab=30.50 E-value=33 Score=32.81 Aligned_cols=33 Identities=36% Similarity=0.517 Sum_probs=24.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~d 40 (599)
|-|+||||- +|||+.+ .+.|..+|++|...-.+
T Consensus 16 k~vlVTGas-~gIG~~i-----a~~l~~~G~~V~~~~r~ 48 (247)
T 1uzm_A 16 RSVLVTGGN-RGIGLAI-----AQRLAADGHKVAVTHRG 48 (247)
T ss_dssp CEEEETTTT-SHHHHHH-----HHHHHHTTCEEEEEESS
T ss_pred CEEEEeCCC-CHHHHHH-----HHHHHHCCCEEEEEeCC
Confidence 679999985 7787754 45677789999876443
No 375
>3c3k_A Alanine racemase; structural genomics, protein structure initiative, NEW YORK research center for structural genomics, nysgxrc; 1.99A {Actinobacillus succinogenes}
Probab=30.44 E-value=1.2e+02 Score=29.03 Aligned_cols=31 Identities=13% Similarity=0.230 Sum_probs=19.7
Q ss_pred cCCCEEEeCCCCCCCchhHHHHHHHHHHHcCCCEEEEe
Q 007533 359 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGIC 396 (599)
Q Consensus 359 ~~~DGIlVPGGfG~rg~eg~i~aik~are~~iP~LGIC 396 (599)
.++||||+.+...+ . ..++.+. .++|+.-+.
T Consensus 63 ~~vdgiI~~~~~~~---~---~~~~~l~-~~iPvV~~~ 93 (285)
T 3c3k_A 63 KMVDGVITMDALSE---L---PELQNII-GAFPWVQCA 93 (285)
T ss_dssp TCCSEEEECCCGGG---H---HHHHHHH-TTSSEEEES
T ss_pred CCCCEEEEeCCCCC---h---HHHHHHh-cCCCEEEEc
Confidence 57999999764211 1 2344555 789987653
No 376
>2rjo_A Twin-arginine translocation pathway signal protei; PSI-2, NYSGXRC, twin arginine translocation pathway signal P structural genomics; HET: GAL; 2.05A {Burkholderia phytofirmans}
Probab=30.32 E-value=1.3e+02 Score=29.41 Aligned_cols=33 Identities=9% Similarity=-0.146 Sum_probs=21.8
Q ss_pred cC--CCEEEeCCCCCCCchhHHHHHHHHHHHcCCCEEEE
Q 007533 359 KG--ADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGI 395 (599)
Q Consensus 359 ~~--~DGIlVPGGfG~rg~eg~i~aik~are~~iP~LGI 395 (599)
.+ +||||+.+... ......++.+.+.++|+.-+
T Consensus 60 ~~~~vdgiIi~~~~~----~~~~~~~~~~~~~~iPvV~~ 94 (332)
T 2rjo_A 60 KTGGNLVLNVDPNDS----ADARVIVEACSKAGAYVTTI 94 (332)
T ss_dssp HTTTCEEEEECCSSH----HHHHHHHHHHHHHTCEEEEE
T ss_pred CCCCCCEEEEeCCCH----HHHHHHHHHHHHCCCeEEEE
Confidence 46 99999976321 22234567777789998765
No 377
>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*
Probab=30.28 E-value=35 Score=32.54 Aligned_cols=31 Identities=19% Similarity=0.324 Sum_probs=22.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCe-eEEee
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLR-VTCIK 38 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~-v~~~k 38 (599)
|-++|||| -+|||+.+ .+.|..+|++ |...-
T Consensus 6 k~vlVtGa-s~gIG~~~-----a~~l~~~G~~~v~~~~ 37 (254)
T 1sby_A 6 KNVIFVAA-LGGIGLDT-----SRELVKRNLKNFVILD 37 (254)
T ss_dssp CEEEEETT-TSHHHHHH-----HHHHHHTCCSEEEEEE
T ss_pred cEEEEECC-CChHHHHH-----HHHHHHCCCcEEEEEe
Confidence 67999998 48888754 4556678986 66553
No 378
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Probab=30.22 E-value=31 Score=33.11 Aligned_cols=30 Identities=37% Similarity=0.551 Sum_probs=22.9
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~ 37 (599)
|-++||||- +|||+.+ .+.|..+|++|...
T Consensus 5 k~vlVTGas-~gIG~~i-----a~~l~~~G~~V~~~ 34 (260)
T 1x1t_A 5 KVAVVTGST-SGIGLGI-----ATALAAQGADIVLN 34 (260)
T ss_dssp CEEEETTCS-SHHHHHH-----HHHHHHTTCEEEEE
T ss_pred CEEEEeCCC-cHHHHHH-----HHHHHHcCCEEEEE
Confidence 789999984 7788754 45677789988765
No 379
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=30.18 E-value=32 Score=33.40 Aligned_cols=32 Identities=34% Similarity=0.421 Sum_probs=23.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~ 39 (599)
|.++|||| -+|||+.+ ...|..+|++|...-.
T Consensus 22 k~vlVTGa-s~gIG~ai-----a~~l~~~G~~V~~~~r 53 (273)
T 1ae1_A 22 TTALVTGG-SKGIGYAI-----VEELAGLGARVYTCSR 53 (273)
T ss_dssp CEEEEESC-SSHHHHHH-----HHHHHHTTCEEEEEES
T ss_pred CEEEEECC-cchHHHHH-----HHHHHHCCCEEEEEeC
Confidence 67999998 47888754 4556778998876533
No 380
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=30.05 E-value=31 Score=33.07 Aligned_cols=32 Identities=28% Similarity=0.343 Sum_probs=23.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~ 39 (599)
|.++||||- +|||+.+ .+.|..+|++|...-.
T Consensus 15 k~vlVTGas-~gIG~~i-----a~~l~~~G~~V~~~~r 46 (260)
T 2zat_A 15 KVALVTAST-DGIGLAI-----ARRLAQDGAHVVVSSR 46 (260)
T ss_dssp CEEEESSCS-SHHHHHH-----HHHHHHTTCEEEEEES
T ss_pred CEEEEECCC-cHHHHHH-----HHHHHHCCCEEEEEeC
Confidence 689999984 7777754 4567778998877533
No 381
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=30.01 E-value=29 Score=34.41 Aligned_cols=32 Identities=31% Similarity=0.540 Sum_probs=24.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~ 39 (599)
|.++|||| -+|||+.++ +.|..+|++|...-.
T Consensus 27 k~vlVTGa-s~gIG~aia-----~~L~~~G~~V~~~~r 58 (297)
T 1xhl_A 27 KSVIITGS-SNGIGRSAA-----VIFAKEGAQVTITGR 58 (297)
T ss_dssp CEEEETTC-SSHHHHHHH-----HHHHHTTCEEEEEES
T ss_pred CEEEEeCC-CcHHHHHHH-----HHHHHCCCEEEEEeC
Confidence 67999998 478887654 567778999887643
No 382
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=29.92 E-value=32 Score=33.31 Aligned_cols=32 Identities=22% Similarity=0.310 Sum_probs=23.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~ 39 (599)
|-|+||||- +|||+. +.+.|..+|++|...-.
T Consensus 32 k~vlITGas-ggIG~~-----la~~L~~~G~~V~~~~r 63 (272)
T 1yb1_A 32 EIVLITGAG-HGIGRL-----TAYEFAKLKSKLVLWDI 63 (272)
T ss_dssp CEEEEETTT-SHHHHH-----HHHHHHHTTCEEEEEES
T ss_pred CEEEEECCC-chHHHH-----HHHHHHHCCCEEEEEEc
Confidence 679999985 677764 45667778998877543
No 383
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=29.82 E-value=45 Score=32.25 Aligned_cols=33 Identities=18% Similarity=0.252 Sum_probs=25.4
Q ss_pred EEEEEeCCc-cCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 007533 2 KYVLVTGGV-VSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (599)
Q Consensus 2 k~i~vtggv-~s~~gkgi~~~s~g~ll~~~g~~v~~~k~ 39 (599)
|-++||||- -+|||+.++ +.|..+|++|...=.
T Consensus 8 k~vlVTGa~~s~gIG~aia-----~~l~~~G~~V~~~~r 41 (269)
T 2h7i_A 8 KRILVSGIITDSSIAFHIA-----RVAQEQGAQLVLTGF 41 (269)
T ss_dssp CEEEECCCSSTTSHHHHHH-----HHHHHTTCEEEEEEC
T ss_pred CEEEEECCCCCCchHHHHH-----HHHHHCCCEEEEEec
Confidence 689999994 799998654 567778998876533
No 384
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=29.75 E-value=31 Score=34.59 Aligned_cols=31 Identities=29% Similarity=0.462 Sum_probs=23.8
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k 38 (599)
|.++||||- +|||+. +.+.|-.+|.+|..+-
T Consensus 47 k~~lVTGas-~GIG~a-----ia~~la~~G~~Vv~~~ 77 (317)
T 3oec_A 47 KVAFITGAA-RGQGRT-----HAVRLAQDGADIVAID 77 (317)
T ss_dssp CEEEESSCS-SHHHHH-----HHHHHHHTTCEEEEEE
T ss_pred CEEEEeCCC-cHHHHH-----HHHHHHHCCCeEEEEe
Confidence 689999985 777775 4456778899988763
No 385
>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2
Probab=29.69 E-value=33 Score=32.80 Aligned_cols=34 Identities=26% Similarity=0.280 Sum_probs=24.4
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCC---CeeEEeeec
Q 007533 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACG---LRVTCIKID 40 (599)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~~s~g~ll~~~g---~~v~~~k~d 40 (599)
+|.|+||||- +|||+.+ .+.|..+| ++|..+-.+
T Consensus 21 ~k~vlITGas-ggIG~~l-----a~~L~~~G~~~~~V~~~~r~ 57 (267)
T 1sny_A 21 MNSILITGCN-RGLGLGL-----VKALLNLPQPPQHLFTTCRN 57 (267)
T ss_dssp CSEEEESCCS-SHHHHHH-----HHHHHTSSSCCSEEEEEESC
T ss_pred CCEEEEECCC-CcHHHHH-----HHHHHhcCCCCcEEEEEecC
Confidence 4789999984 7888654 45667778 888776443
No 386
>2pez_A Bifunctional 3'-phosphoadenosine 5'- phosphosulfate synthetase 1 (PAPS synthetase...; NMP-kinase fold, protein in complex with nucleic acid; HET: GGZ DAT; 1.40A {Homo sapiens} PDB: 2pey_A* 2ax4_A*
Probab=29.61 E-value=68 Score=28.69 Aligned_cols=34 Identities=26% Similarity=0.316 Sum_probs=26.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~ 37 (599)
++|++||. +|-||=.++..+...|+..|+.+..+
T Consensus 6 ~~i~l~G~--~GsGKST~~~~L~~~l~~~g~~~i~~ 39 (179)
T 2pez_A 6 CTVWLTGL--SGAGKTTVSMALEEYLVCHGIPCYTL 39 (179)
T ss_dssp EEEEEECC--TTSSHHHHHHHHHHHHHHTTCCEEEE
T ss_pred cEEEEECC--CCCCHHHHHHHHHHHHhhCCCcEEEE
Confidence 57899986 88999888888888777778765433
No 387
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=29.56 E-value=32 Score=33.03 Aligned_cols=31 Identities=39% Similarity=0.548 Sum_probs=23.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k 38 (599)
|-++||||- +|||+.+ .+.|.++|++|...-
T Consensus 6 k~vlVTGas-~gIG~~i-----a~~l~~~G~~V~~~~ 36 (254)
T 1hdc_A 6 KTVIITGGA-RGLGAEA-----ARQAVAAGARVVLAD 36 (254)
T ss_dssp SEEEEETTT-SHHHHHH-----HHHHHHTTCEEEEEE
T ss_pred CEEEEECCC-cHHHHHH-----HHHHHHCCCEEEEEe
Confidence 679999984 7777754 456777899988753
No 388
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=29.46 E-value=26 Score=34.30 Aligned_cols=30 Identities=33% Similarity=0.511 Sum_probs=23.0
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~ 37 (599)
|.++||||- +|||+. +.+.|..+|.+|...
T Consensus 27 k~~lVTGas-~gIG~a-----ia~~la~~G~~V~~~ 56 (271)
T 4ibo_A 27 RTALVTGSS-RGLGRA-----MAEGLAVAGARILIN 56 (271)
T ss_dssp CEEEETTCS-SHHHHH-----HHHHHHHTTCEEEEC
T ss_pred CEEEEeCCC-cHHHHH-----HHHHHHHCCCEEEEE
Confidence 789999985 778775 456677889988764
No 389
>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*
Probab=29.42 E-value=28 Score=35.13 Aligned_cols=30 Identities=33% Similarity=0.476 Sum_probs=23.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~ 37 (599)
|.++||||- +|||+.++ +.|..+|.+|.+.
T Consensus 10 k~~lVTGas-~GIG~~~a-----~~La~~Ga~Vv~~ 39 (319)
T 1gz6_A 10 RVVLVTGAG-GGLGRAYA-----LAFAERGALVVVN 39 (319)
T ss_dssp CEEEETTTT-SHHHHHHH-----HHHHHTTCEEEEE
T ss_pred CEEEEeCCC-cHHHHHHH-----HHHHHCCCEEEEE
Confidence 789999986 88888654 5677789988764
No 390
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=29.41 E-value=34 Score=32.99 Aligned_cols=32 Identities=25% Similarity=0.395 Sum_probs=24.0
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~ 39 (599)
|.++||||- +|||+.+ .+.|..+|++|...-.
T Consensus 8 k~vlVTGas-~gIG~~i-----a~~l~~~G~~V~~~~r 39 (262)
T 1zem_A 8 KVCLVTGAG-GNIGLAT-----ALRLAEEGTAIALLDM 39 (262)
T ss_dssp CEEEEETTT-SHHHHHH-----HHHHHHTTCEEEEEES
T ss_pred CEEEEeCCC-cHHHHHH-----HHHHHHCCCEEEEEeC
Confidence 789999984 7888754 4667788999877643
No 391
>3e3m_A Transcriptional regulator, LACI family; structural genomics, DNA-binding, plasmid, transcription regulation, PSI-2; 1.60A {Silicibacter pomeroyi}
Probab=29.17 E-value=1.5e+02 Score=29.31 Aligned_cols=31 Identities=10% Similarity=0.216 Sum_probs=21.6
Q ss_pred cCCCEEEeCCCCCCCchhHHHHHHHHHHHcCCCEEEE
Q 007533 359 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGI 395 (599)
Q Consensus 359 ~~~DGIlVPGGfG~rg~eg~i~aik~are~~iP~LGI 395 (599)
.++||||+.+.... + ..++.+.+.++|+.-+
T Consensus 125 ~~vdGiI~~~~~~~---~---~~~~~l~~~~iPvV~i 155 (355)
T 3e3m_A 125 RRPEAMVLSYDGHT---E---QTIRLLQRASIPIVEI 155 (355)
T ss_dssp TCCSEEEEECSCCC---H---HHHHHHHHCCSCEEEE
T ss_pred CCCCEEEEeCCCCC---H---HHHHHHHhCCCCEEEE
Confidence 58999999764322 1 3456677789998765
No 392
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=29.08 E-value=46 Score=32.44 Aligned_cols=34 Identities=18% Similarity=0.330 Sum_probs=25.8
Q ss_pred EEEEEeCCcc-CCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 007533 2 KYVLVTGGVV-SGLGKGVTASSIGVLLKACGLRVTCIKID 40 (599)
Q Consensus 2 k~i~vtggv~-s~~gkgi~~~s~g~ll~~~g~~v~~~k~d 40 (599)
|.++||||-- +|||+.+ .+.|-.+|++|...=.+
T Consensus 27 k~vlVTGasg~~GIG~~i-----a~~l~~~G~~V~~~~r~ 61 (280)
T 3nrc_A 27 KKILITGLLSNKSIAYGI-----AKAMHREGAELAFTYVG 61 (280)
T ss_dssp CEEEECCCCSTTCHHHHH-----HHHHHHTTCEEEEEECT
T ss_pred CEEEEECCCCCCCHHHHH-----HHHHHHcCCEEEEeeCc
Confidence 7899999854 7899865 45667789998876443
No 393
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=29.06 E-value=34 Score=33.86 Aligned_cols=31 Identities=26% Similarity=0.392 Sum_probs=23.2
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k 38 (599)
|.|+||||- +|||+.++ +.|..+|++|...-
T Consensus 35 k~vlVTGas-~gIG~aia-----~~L~~~G~~V~~~~ 65 (291)
T 3cxt_A 35 KIALVTGAS-YGIGFAIA-----SAYAKAGATIVFND 65 (291)
T ss_dssp CEEEEETCS-SHHHHHHH-----HHHHHTTCEEEEEE
T ss_pred CEEEEeCCC-cHHHHHHH-----HHHHHCCCEEEEEe
Confidence 679999985 78887654 45667899887653
No 394
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=28.92 E-value=35 Score=33.24 Aligned_cols=32 Identities=28% Similarity=0.470 Sum_probs=24.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~ 39 (599)
|.++||||- +|||+. +.+.|-.+|++|...-.
T Consensus 16 k~~lVTGas-~gIG~a-----~a~~la~~G~~V~~~~r 47 (280)
T 3pgx_A 16 RVAFITGAA-RGQGRS-----HAVRLAAEGADIIACDI 47 (280)
T ss_dssp CEEEEESTT-SHHHHH-----HHHHHHHTTCEEEEEEC
T ss_pred CEEEEECCC-cHHHHH-----HHHHHHHCCCEEEEEec
Confidence 789999985 777764 55667788999887644
No 395
>3pzy_A MOG; ssgcid, seattle structural genomics center for infectious DI biosynthetic protein; 1.80A {Mycobacterium avium subsp} PDB: 3oi9_A 2g4r_A
Probab=28.91 E-value=51 Score=30.40 Aligned_cols=45 Identities=24% Similarity=0.326 Sum_probs=32.8
Q ss_pred eEEcccchHHHHHHHHHHhcccCCCCCCCCcEEEEeeCcc-ccccccchHHHHHHHh
Q 007533 111 VQVVPHITDEIQDWIERVAMIPVDGKEGPVDVCVIELGGT-IGDIESMPFIEALGQF 166 (599)
Q Consensus 111 vqviphit~~i~~~i~~~~~~p~d~~~~~~dv~i~e~ggt-vgdies~pf~ea~rq~ 166 (599)
..+||-= ++|++.|++... .+.|++|+ .||| +|+--=.| ||++++
T Consensus 46 ~~iv~Dd-~~i~~al~~a~~-------~~~DlVit-tGG~s~g~~D~t~--eal~~~ 91 (164)
T 3pzy_A 46 PEVVADG-SPVGEALRKAID-------DDVDVILT-SGGTGIAPTDSTP--DQTVAV 91 (164)
T ss_dssp CEEECSS-HHHHHHHHHHHH-------TTCSEEEE-ESCCSSSTTCCHH--HHHHTT
T ss_pred EEEeCCH-HHHHHHHHHHHh-------CCCCEEEE-CCCCCCCCCccHH--HHHHHH
Confidence 4688888 899999988752 35898876 7777 66644445 787776
No 396
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=28.90 E-value=31 Score=33.70 Aligned_cols=29 Identities=31% Similarity=0.536 Sum_probs=21.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEE
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTC 36 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~ 36 (599)
|.++||||- ||||+.+ .+.|-.+|++|.+
T Consensus 28 k~~lVTGas-~GIG~ai-----a~~la~~G~~Vv~ 56 (267)
T 3u5t_A 28 KVAIVTGAS-RGIGAAI-----AARLASDGFTVVI 56 (267)
T ss_dssp CEEEEESCS-SHHHHHH-----HHHHHHHTCEEEE
T ss_pred CEEEEeCCC-CHHHHHH-----HHHHHHCCCEEEE
Confidence 689999985 7787754 4556677988865
No 397
>2v54_A DTMP kinase, thymidylate kinase; nucleotide biosynthesis, ATP-binding, nucleotide-binding, poxvirus, transferase; HET: TYD POP; 2.4A {Vaccinia virus copenhagen} PDB: 2w0s_A*
Probab=28.88 E-value=32 Score=31.35 Aligned_cols=31 Identities=13% Similarity=0.098 Sum_probs=22.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEE
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTC 36 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~ 36 (599)
++|+++|+ +|-||...+.-|...| .|++|..
T Consensus 5 ~~I~l~G~--~GsGKsT~~~~L~~~l--~g~~~~~ 35 (204)
T 2v54_A 5 ALIVFEGL--DKSGKTTQCMNIMESI--PANTIKY 35 (204)
T ss_dssp CEEEEECC--TTSSHHHHHHHHHHTS--CGGGEEE
T ss_pred cEEEEEcC--CCCCHHHHHHHHHHHH--CCCceEE
Confidence 58999997 7889987777665544 2676544
No 398
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=28.83 E-value=32 Score=32.84 Aligned_cols=30 Identities=33% Similarity=0.529 Sum_probs=22.0
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~ 37 (599)
|.|+||||- +|||+-++ +.|..+|++|..+
T Consensus 22 k~vlItGas-ggiG~~la-----~~l~~~G~~v~~~ 51 (274)
T 1ja9_A 22 KVALTTGAG-RGIGRGIA-----IELGRRGASVVVN 51 (274)
T ss_dssp CEEEETTTT-SHHHHHHH-----HHHHHTTCEEEEE
T ss_pred CEEEEeCCC-chHHHHHH-----HHHHHCCCEEEEE
Confidence 679999984 77776554 5577789887754
No 399
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=28.78 E-value=35 Score=33.77 Aligned_cols=30 Identities=33% Similarity=0.512 Sum_probs=22.8
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~ 37 (599)
|.++||||- +|||+.+ .+.|-.+|++|.+.
T Consensus 50 k~vlVTGas-~GIG~ai-----a~~la~~G~~V~~~ 79 (294)
T 3r3s_A 50 RKALVTGGD-SGIGRAA-----AIAYAREGADVAIN 79 (294)
T ss_dssp CEEEEETTT-SHHHHHH-----HHHHHHTTCEEEEE
T ss_pred CEEEEeCCC-cHHHHHH-----HHHHHHCCCEEEEE
Confidence 789999984 7888754 45677889988763
No 400
>1uf9_A TT1252 protein; P-loop, nucleotide binding domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: ATP; 2.80A {Thermus thermophilus} SCOP: c.37.1.1
Probab=28.78 E-value=42 Score=30.37 Aligned_cols=27 Identities=30% Similarity=0.503 Sum_probs=18.5
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCe
Q 007533 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLR 33 (599)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~ 33 (599)
++.|++||+ +|-||. +++++|..+|+.
T Consensus 8 ~~~I~i~G~--~GsGKS----T~~~~La~~g~~ 34 (203)
T 1uf9_A 8 PIIIGITGN--IGSGKS----TVAALLRSWGYP 34 (203)
T ss_dssp CEEEEEEEC--TTSCHH----HHHHHHHHTTCC
T ss_pred ceEEEEECC--CCCCHH----HHHHHHHHCCCE
Confidence 357899998 677885 455666666653
No 401
>3ld9_A DTMP kinase, thymidylate kinase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 2.15A {Ehrlichia chaffeensis}
Probab=28.73 E-value=58 Score=31.57 Aligned_cols=38 Identities=18% Similarity=0.373 Sum_probs=31.8
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHH-CCCeeEEeeecc
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKA-CGLRVTCIKIDP 41 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~-~g~~v~~~k~dp 41 (599)
++|+++|. +|-||...+..+...|.. +|++|...--.|
T Consensus 22 ~~i~~~G~--~g~GKst~~~~l~~~l~~~~g~~v~~~treP 60 (223)
T 3ld9_A 22 MFITFEGI--DGSGKTTQSHLLAEYLSEIYGVNNVVLTREP 60 (223)
T ss_dssp EEEEEECS--TTSSHHHHHHHHHHHHHHHHCGGGEEEEESS
T ss_pred eEEEEECC--CCCCHHHHHHHHHHHHhhccCceeeEeeeCC
Confidence 68999985 899999999999999999 999887633334
No 402
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=28.67 E-value=35 Score=32.92 Aligned_cols=32 Identities=34% Similarity=0.448 Sum_probs=23.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~ 39 (599)
|.++||||- +|||+.+ .+.|..+|++|...-.
T Consensus 8 k~vlVTGas-~gIG~~i-----a~~l~~~G~~V~~~~r 39 (260)
T 1nff_A 8 KVALVSGGA-RGMGASH-----VRAMVAEGAKVVFGDI 39 (260)
T ss_dssp CEEEEETTT-SHHHHHH-----HHHHHHTTCEEEEEES
T ss_pred CEEEEeCCC-CHHHHHH-----HHHHHHCCCEEEEEeC
Confidence 679999984 6777654 4567778999887533
No 403
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=28.67 E-value=35 Score=33.46 Aligned_cols=30 Identities=33% Similarity=0.616 Sum_probs=22.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~ 37 (599)
|.++||||- +|||+.+ .+.|-.+|++|...
T Consensus 30 k~~lVTGas-~GIG~ai-----a~~la~~G~~V~~~ 59 (280)
T 4da9_A 30 PVAIVTGGR-RGIGLGI-----ARALAASGFDIAIT 59 (280)
T ss_dssp CEEEEETTT-SHHHHHH-----HHHHHHTTCEEEEE
T ss_pred CEEEEecCC-CHHHHHH-----HHHHHHCCCeEEEE
Confidence 679999984 7777754 45666789887654
No 404
>3lkv_A Uncharacterized conserved domain protein; ATPase binding cassette, PSI, MCSG, structural genomics, Pro structure initiative; HET: PHE; 2.20A {Vibrio cholerae}
Probab=28.65 E-value=97 Score=30.51 Aligned_cols=38 Identities=16% Similarity=0.090 Sum_probs=23.9
Q ss_pred HhccCCCEEEeCCCCCCCchh-HHHHHHHHHHHcCCCEEEEe
Q 007533 356 KLLKGADGILVPGGFGNRGVQ-GKILAAKYAREHRIPYLGIC 396 (599)
Q Consensus 356 ~~L~~~DGIlVPGGfG~rg~e-g~i~aik~are~~iP~LGIC 396 (599)
....+.|+|+++.. .... ..-.....+++.++|++|.-
T Consensus 189 ~l~~~~d~i~~~~d---~~~~~~~~~i~~~~~~~~iPv~~~~ 227 (302)
T 3lkv_A 189 AIAEKSDVIYALID---NTVASAIEGMIVAANQAKTPVFGAA 227 (302)
T ss_dssp HHHTTCSEEEECSC---HHHHHTHHHHHHHHHHTTCCEEESS
T ss_pred hccCCeeEEEEeCC---cchhhHHHHHHHHHhhcCCceeecc
Confidence 34578999998762 2222 22233455677899999854
No 405
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=28.55 E-value=35 Score=34.11 Aligned_cols=31 Identities=32% Similarity=0.416 Sum_probs=24.9
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k 38 (599)
|-++|||| -||||+.+ .+.|-..|.+|.+.=
T Consensus 30 KvalVTGa-s~GIG~ai-----A~~la~~Ga~V~i~~ 60 (273)
T 4fgs_A 30 KIAVITGA-TSGIGLAA-----AKRFVAEGARVFITG 60 (273)
T ss_dssp CEEEEESC-SSHHHHHH-----HHHHHHTTCEEEEEE
T ss_pred CEEEEeCc-CCHHHHHH-----HHHHHHCCCEEEEEE
Confidence 67999998 58999864 567889999987753
No 406
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=28.51 E-value=32 Score=33.58 Aligned_cols=30 Identities=27% Similarity=0.453 Sum_probs=22.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~ 37 (599)
|.++||||- +|||+.++ +.|-.+|++|...
T Consensus 28 k~~lVTGas-~GIG~aia-----~~l~~~G~~V~~~ 57 (277)
T 4fc7_A 28 KVAFITGGG-SGIGFRIA-----EIFMRHGCHTVIA 57 (277)
T ss_dssp CEEEEETTT-SHHHHHHH-----HHHHTTTCEEEEE
T ss_pred CEEEEeCCC-chHHHHHH-----HHHHHCCCEEEEE
Confidence 789999995 77887554 5566789888765
No 407
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=28.48 E-value=33 Score=33.60 Aligned_cols=30 Identities=37% Similarity=0.525 Sum_probs=22.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~ 37 (599)
|.++||||- +|||+.+ .+.|..+|++|...
T Consensus 30 k~vlVTGas-~gIG~ai-----a~~L~~~G~~V~~~ 59 (276)
T 2b4q_A 30 RIALVTGGS-RGIGQMI-----AQGLLEAGARVFIC 59 (276)
T ss_dssp CEEEEETTT-SHHHHHH-----HHHHHHTTCEEEEE
T ss_pred CEEEEeCCC-ChHHHHH-----HHHHHHCCCEEEEE
Confidence 789999984 7788754 45667789988765
No 408
>1odf_A YGR205W, hypothetical 33.3 kDa protein in ADE3-Ser2 intergenic region; yeast protein, ATP binding protein; 2.25A {Saccharomyces cerevisiae} SCOP: c.37.1.6
Probab=28.44 E-value=44 Score=33.56 Aligned_cols=41 Identities=22% Similarity=0.239 Sum_probs=31.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCC--CeeEEe-eeccccc
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACG--LRVTCI-KIDPYLN 44 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g--~~v~~~-k~dpyln 44 (599)
..|.|+|+ ||-||=.++..|..+|...| .++..+ -.|+|+-
T Consensus 32 ~ii~I~G~--sGsGKSTla~~L~~~l~~~g~~~~~~~iv~~D~f~~ 75 (290)
T 1odf_A 32 LFIFFSGP--QGSGKSFTSIQIYNHLMEKYGGEKSIGYASIDDFYL 75 (290)
T ss_dssp EEEEEECC--TTSSHHHHHHHHHHHHHHHHGGGSCEEEEEGGGGBC
T ss_pred eEEEEECC--CCCCHHHHHHHHHHHhhhcCCCCceEEEeccccccC
Confidence 46788886 67789999999999998866 555555 7777653
No 409
>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*
Probab=28.39 E-value=40 Score=33.55 Aligned_cols=33 Identities=24% Similarity=0.302 Sum_probs=26.2
Q ss_pred EEEEEeCCc-cCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 007533 2 KYVLVTGGV-VSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (599)
Q Consensus 2 k~i~vtggv-~s~~gkgi~~~s~g~ll~~~g~~v~~~k~ 39 (599)
|.++||||- -||||+.+ .+.|..+|++|...-.
T Consensus 10 k~~lVTGa~~s~GIG~ai-----a~~la~~G~~Vv~~~r 43 (315)
T 2o2s_A 10 QTAFVAGVADSHGYGWAI-----AKHLASAGARVALGTW 43 (315)
T ss_dssp CEEEEECCSSSSSHHHHH-----HHHHHTTTCEEEEEEC
T ss_pred CEEEEeCCCCCCChHHHH-----HHHHHHCCCEEEEEec
Confidence 789999995 89999865 4567778999987643
No 410
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=28.37 E-value=28 Score=34.08 Aligned_cols=31 Identities=35% Similarity=0.595 Sum_probs=23.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k 38 (599)
|.|+||||- +|||+.++ +.|..+|++|...-
T Consensus 45 k~vlITGas-ggIG~~la-----~~L~~~G~~V~~~~ 75 (285)
T 2c07_A 45 KVALVTGAG-RGIGREIA-----KMLAKSVSHVICIS 75 (285)
T ss_dssp CEEEEESTT-SHHHHHHH-----HHHTTTSSEEEEEE
T ss_pred CEEEEECCC-cHHHHHHH-----HHHHHcCCEEEEEc
Confidence 679999986 78887654 45667899887643
No 411
>2qh8_A Uncharacterized protein; conserved domain protein, structural genomics, PSI-2, MCSG, BIG_563.1, protein structure initiative; HET: HIS; 2.20A {Vibrio cholerae o1 biovar eltor str} PDB: 3lkv_A*
Probab=28.24 E-value=1.1e+02 Score=29.80 Aligned_cols=82 Identities=16% Similarity=0.067 Sum_probs=44.8
Q ss_pred EEEEEeecCCC--cchHHHHHHHHHHcCCcceeeeEEEEecCCCCCCccccCCchhhhHHHHhccCCCEEEeCCCCCCCc
Q 007533 297 RIAMVGKYTGL--SDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRG 374 (599)
Q Consensus 297 ~IaiVGkY~~l--~DaY~SIi~AL~haG~~~~v~v~i~wi~s~~le~~~~~~~p~~y~~a~~~L~~~DGIlVPGGfG~rg 374 (599)
|||+++.-... .+-+..+.++|+..|+++ ...|+.+. + +.+..+.+.+..+|+|++++. .-
T Consensus 142 ~I~~i~~~~~~~~~~r~~g~~~al~~~gi~~----~~~~~~~~--~--------~~~~~~~~l~~~~dai~~~~D---~~ 204 (302)
T 2qh8_A 142 SIGVVYNPGEANAVSLMELLKLSAAKHGIKL----VEATALKS--A--------DVQSATQAIAEKSDVIYALID---NT 204 (302)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHHHTTCEE----EEEECSSG--G--------GHHHHHHHHGGGCSEEEECSC---HH
T ss_pred EEEEEecCCCcchHHHHHHHHHHHHHcCCEE----EEEecCCh--H--------HHHHHHHHHhccCCEEEECCc---Hh
Confidence 79999532211 112345677788877654 33444321 1 123334445678999999752 21
Q ss_pred hhHHHHH-HHHHHHcCCCEEEE
Q 007533 375 VQGKILA-AKYAREHRIPYLGI 395 (599)
Q Consensus 375 ~eg~i~a-ik~are~~iP~LGI 395 (599)
.-+.+.+ .+.+++.++|++|.
T Consensus 205 a~g~~~~l~~~~~~~~i~vig~ 226 (302)
T 2qh8_A 205 VASAIEGMIVAANQAKTPVFGA 226 (302)
T ss_dssp HHTTHHHHHHHHHHTTCCEEES
T ss_pred HHHHHHHHHHHHHHcCCCEEEC
Confidence 1232333 34455678999985
No 412
>1uj2_A Uridine-cytidine kinase 2; alpha/beta mononucleotide-binding HOLD, transferase; HET: C5P ADP; 1.80A {Homo sapiens} SCOP: c.37.1.6 PDB: 1uei_A* 1uej_A* 1udw_A 1ufq_A* 1xrj_A*
Probab=28.18 E-value=47 Score=31.88 Aligned_cols=24 Identities=33% Similarity=0.439 Sum_probs=17.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHH
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLL 27 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll 27 (599)
..|.|||+ +|-||..+|.-|...|
T Consensus 23 ~iI~I~G~--~GSGKST~a~~L~~~l 46 (252)
T 1uj2_A 23 FLIGVSGG--TASGKSSVCAKIVQLL 46 (252)
T ss_dssp EEEEEECS--TTSSHHHHHHHHHHHT
T ss_pred EEEEEECC--CCCCHHHHHHHHHHHh
Confidence 56899997 5778987776655544
No 413
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=28.14 E-value=35 Score=33.29 Aligned_cols=31 Identities=29% Similarity=0.421 Sum_probs=23.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k 38 (599)
|-++||||- +|||+.+ .+.|-.+|++|...-
T Consensus 28 k~vlVTGas-~gIG~ai-----a~~la~~G~~V~~~~ 58 (266)
T 3grp_A 28 RKALVTGAT-GGIGEAI-----ARCFHAQGAIVGLHG 58 (266)
T ss_dssp CEEEESSTT-SHHHHHH-----HHHHHHTTCEEEEEE
T ss_pred CEEEEeCCC-cHHHHHH-----HHHHHHCCCEEEEEe
Confidence 789999985 7888754 466778899887653
No 414
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=28.10 E-value=35 Score=32.48 Aligned_cols=30 Identities=30% Similarity=0.494 Sum_probs=22.2
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~ 37 (599)
|.|+||||- +|||+.+ .+.|..+|++|...
T Consensus 8 k~vlITGas-ggiG~~~-----a~~l~~~G~~V~~~ 37 (261)
T 1gee_A 8 KVVVITGSS-TGLGKSM-----AIRFATEKAKVVVN 37 (261)
T ss_dssp CEEEETTCS-SHHHHHH-----HHHHHHTTCEEEEE
T ss_pred CEEEEeCCC-ChHHHHH-----HHHHHHCCCEEEEE
Confidence 689999985 7777654 45666789887764
No 415
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=28.07 E-value=36 Score=33.29 Aligned_cols=31 Identities=32% Similarity=0.493 Sum_probs=23.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k 38 (599)
|.|+||||- +|||+.+ .+.|..+|++|..+=
T Consensus 19 k~vlVTGas-ggIG~~l-----a~~l~~~G~~V~~~~ 49 (303)
T 1yxm_A 19 QVAIVTGGA-TGIGKAI-----VKELLELGSNVVIAS 49 (303)
T ss_dssp CEEEEETTT-SHHHHHH-----HHHHHHTTCEEEEEE
T ss_pred CEEEEECCC-cHHHHHH-----HHHHHHCCCEEEEEe
Confidence 679999984 7777754 455677899887653
No 416
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=28.00 E-value=38 Score=32.36 Aligned_cols=32 Identities=28% Similarity=0.465 Sum_probs=24.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~ 39 (599)
|.++||||- +|||+ ++.+.|-.+|++|.+.=.
T Consensus 10 k~vlITGas-~gIG~-----~~a~~l~~~G~~V~~~~r 41 (261)
T 3n74_A 10 KVALITGAG-SGFGE-----GMAKRFAKGGAKVVIVDR 41 (261)
T ss_dssp CEEEEETTT-SHHHH-----HHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCC-chHHH-----HHHHHHHHCCCEEEEEcC
Confidence 789999996 77776 445667788999887643
No 417
>3tpf_A Otcase, ornithine carbamoyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, rossman fold; 2.70A {Campylobacter jejuni subsp}
Probab=27.98 E-value=2.1e+02 Score=29.26 Aligned_cols=98 Identities=12% Similarity=0.253 Sum_probs=63.5
Q ss_pred cccCCchhhhhhhhcCCCcccEEEEecCCCCChhhhhccccCCCCCCCCeeeeCCCCCccchhHHHHHHHHHHHHHcCCC
Q 007533 192 QKTKPTQHSVRGLRGQGLTPNILACRSTVALDDNVKGKLSQFCHVPEQNIITLYDVPNIWHIPLLLRKAHEAIFKVLNLQ 271 (599)
Q Consensus 192 ~ktkptq~sv~~Lrs~Gi~pd~iv~R~~~~l~~~~~~Kislfc~v~~~~Vi~~~dv~tiy~vPl~L~g~~~~i~~~l~l~ 271 (599)
.|--+..-+++-|.+. .|+|++|... ...-+.+|-++.|| ||+.-| + .+|=...|--++ -|.++++
T Consensus 76 ~kgEsl~DTarvls~~---~D~iviR~~~---~~~~~~lA~~~~vP---VINag~-~-~~HPtQaLaDl~-Ti~e~~g-- 141 (307)
T 3tpf_A 76 SRGEPVKDTARVIGAM---VDFVMMRVNK---HETLLEFARYSKAP---VINALS-E-LYHPTQVLGDLF-TIKEWNK-- 141 (307)
T ss_dssp TTSSCHHHHHHHHHHH---SSEEEEECSC---HHHHHHHHHHCSSC---EEEEEC-S-SCCHHHHHHHHH-HHHHTTC--
T ss_pred CCCCCHHHHHHHHHHh---CCEEEEecCC---hHHHHHHHHhCCCC---EEeCCC-C-CcCcHHHHHHHH-HHHHHhC--
Confidence 3555777788888776 7999999874 45666777777776 998877 4 555443331111 1112111
Q ss_pred CCCCchhhHHHHHHHhhhcCCCC-ceEEEEEeecCCCcchHHHHHHHHHHcCCcce
Q 007533 272 GTTKEPLLKEWTSRAEICDGLHE-PVRIAMVGKYTGLSDAYLSILKALLHASVDLR 326 (599)
Q Consensus 272 ~~~~~~~l~~W~~l~~~~~~~~~-~v~IaiVGkY~~l~DaY~SIi~AL~haG~~~~ 326 (599)
.-+ .++|++||++. ..-.|.+.++...|+++.
T Consensus 142 --------------------~l~~gl~va~vGD~~---~va~Sl~~~~~~~G~~v~ 174 (307)
T 3tpf_A 142 --------------------MQNGIAKVAFIGDSN---NMCNSWLITAAILGFEIS 174 (307)
T ss_dssp --------------------CGGGCCEEEEESCSS---HHHHHHHHHHHHHTCEEE
T ss_pred --------------------CCCCCCEEEEEcCCC---ccHHHHHHHHHHcCCEEE
Confidence 113 57999999853 356688888888887653
No 418
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=27.95 E-value=34 Score=33.19 Aligned_cols=32 Identities=28% Similarity=0.459 Sum_probs=24.2
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~ 39 (599)
|-++||||- +|||+.+ .+.|-.+|++|...-.
T Consensus 21 k~vlVTGas-~gIG~ai-----a~~l~~~G~~V~~~~r 52 (266)
T 4egf_A 21 KRALITGAT-KGIGADI-----ARAFAAAGARLVLSGR 52 (266)
T ss_dssp CEEEETTTT-SHHHHHH-----HHHHHHTTCEEEEEES
T ss_pred CEEEEeCCC-cHHHHHH-----HHHHHHCCCEEEEEeC
Confidence 679999985 7888754 4567788998877644
No 419
>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}
Probab=27.91 E-value=40 Score=32.50 Aligned_cols=31 Identities=29% Similarity=0.327 Sum_probs=23.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k 38 (599)
|.|+|||| -+|||+.++ +.|..+|++|..+-
T Consensus 35 k~vlITGa-sggIG~~la-----~~L~~~G~~V~~~~ 65 (279)
T 3ctm_A 35 KVASVTGS-SGGIGWAVA-----EAYAQAGADVAIWY 65 (279)
T ss_dssp CEEEETTT-TSSHHHHHH-----HHHHHHTCEEEEEE
T ss_pred CEEEEECC-CcHHHHHHH-----HHHHHCCCEEEEEe
Confidence 67999998 578888654 45666799887753
No 420
>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2
Probab=27.90 E-value=33 Score=34.65 Aligned_cols=31 Identities=32% Similarity=0.353 Sum_probs=24.0
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k 38 (599)
|.++||||- +|||+.+ .+.|..+|++|.+.=
T Consensus 47 k~~lVTGas-~GIG~ai-----a~~La~~G~~Vv~~~ 77 (328)
T 2qhx_A 47 PVALVTGAA-KRLGRSI-----AEGLHAEGYAVCLHY 77 (328)
T ss_dssp CEEEETTCS-SHHHHHH-----HHHHHHTTCEEEEEE
T ss_pred CEEEEECCC-CHHHHHH-----HHHHHHCCCEEEEEc
Confidence 689999986 7888754 456778899988753
No 421
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2
Probab=27.85 E-value=32 Score=33.00 Aligned_cols=30 Identities=47% Similarity=0.567 Sum_probs=22.8
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~ 37 (599)
|.++||||- +|||+.+ .+.|..+|++|...
T Consensus 7 k~vlVTGas-~giG~~i-----a~~l~~~G~~V~~~ 36 (253)
T 1hxh_A 7 KVALVTGGA-SGVGLEV-----VKLLLGEGAKVAFS 36 (253)
T ss_dssp CEEEETTTT-SHHHHHH-----HHHHHHTTCEEEEE
T ss_pred CEEEEeCCC-cHHHHHH-----HHHHHHCCCEEEEE
Confidence 679999984 7777754 45677789998765
No 422
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=27.83 E-value=38 Score=33.01 Aligned_cols=30 Identities=33% Similarity=0.473 Sum_probs=22.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~ 37 (599)
|-++||||- +|||+.++ +.|..+|++|...
T Consensus 30 k~vlVTGas-~gIG~~ia-----~~l~~~G~~V~~~ 59 (283)
T 1g0o_A 30 KVALVTGAG-RGIGREMA-----MELGRRGCKVIVN 59 (283)
T ss_dssp CEEEETTTT-SHHHHHHH-----HHHHHTTCEEEEE
T ss_pred CEEEEeCCC-cHHHHHHH-----HHHHHCCCEEEEE
Confidence 679999984 78887554 5567789988764
No 423
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=27.65 E-value=35 Score=32.17 Aligned_cols=32 Identities=28% Similarity=0.433 Sum_probs=23.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~ 39 (599)
|.|+||||- +|||+. +.+.|..+|++|...=.
T Consensus 7 k~vlVtGas-ggiG~~-----~a~~l~~~G~~V~~~~r 38 (251)
T 1zk4_A 7 KVAIITGGT-LGIGLA-----IATKFVEEGAKVMITGR 38 (251)
T ss_dssp CEEEETTTT-SHHHHH-----HHHHHHHTTCEEEEEES
T ss_pred cEEEEeCCC-ChHHHH-----HHHHHHHCCCEEEEEeC
Confidence 689999983 677664 55567778998887643
No 424
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=27.62 E-value=35 Score=32.65 Aligned_cols=33 Identities=30% Similarity=0.460 Sum_probs=23.8
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~d 40 (599)
|-|+|||| -+|||+.+ .+.|..+|++|...-.+
T Consensus 15 k~vlITGa-sggiG~~l-----a~~l~~~G~~V~~~~r~ 47 (266)
T 1xq1_A 15 KTVLVTGG-TKGIGHAI-----VEEFAGFGAVIHTCARN 47 (266)
T ss_dssp CEEEETTT-TSHHHHHH-----HHHHHHTTCEEEEEESC
T ss_pred CEEEEECC-CCHHHHHH-----HHHHHHCCCEEEEEeCC
Confidence 67999998 57777654 45566789988776433
No 425
>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}
Probab=27.57 E-value=41 Score=33.97 Aligned_cols=30 Identities=37% Similarity=0.560 Sum_probs=22.8
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~ 37 (599)
|.++||||- ||||+ ++.+.|-.+|++|...
T Consensus 6 k~vlVTGas-~GIG~-----aia~~L~~~G~~V~~~ 35 (324)
T 3u9l_A 6 KIILITGAS-SGFGR-----LTAEALAGAGHRVYAS 35 (324)
T ss_dssp CEEEESSCS-SHHHH-----HHHHHHHHTTCEEEEE
T ss_pred CEEEEECCC-cHHHH-----HHHHHHHHCCCEEEEe
Confidence 689999985 77776 4556677889988654
No 426
>2h0a_A TTHA0807, transcriptional regulator; repressor, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=27.40 E-value=69 Score=30.20 Aligned_cols=32 Identities=9% Similarity=-0.077 Sum_probs=18.7
Q ss_pred cCCCEEEeCCCCCCCchhHHHHHHHHHHHcCCCEEEEe
Q 007533 359 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGIC 396 (599)
Q Consensus 359 ~~~DGIlVPGGfG~rg~eg~i~aik~are~~iP~LGIC 396 (599)
.++||||+.+...+. ..++.+++.++|+.-+.
T Consensus 54 ~~vdgiI~~~~~~~~------~~~~~~~~~~iPvV~~~ 85 (276)
T 2h0a_A 54 YLTDGLILASYDLTE------RFEEGRLPTERPVVLVD 85 (276)
T ss_dssp CCCSEEEEESCCCC------------CCSCSSCEEEES
T ss_pred CCCCEEEEecCCCCH------HHHHHHhhcCCCEEEEe
Confidence 579999997743321 23455666789987653
No 427
>3dbi_A Sugar-binding transcriptional regulator, LACI FAM; structural genomics, sugar-binding transcriptional regulator structure initiative, PSI-2; HET: MSE; 2.45A {Escherichia coli K12}
Probab=27.38 E-value=2e+02 Score=28.12 Aligned_cols=88 Identities=15% Similarity=0.141 Sum_probs=42.6
Q ss_pred CceEEEEEeecCCCcchH-HHHHHHHHHcCCcceeeeEEEEecCCCCCCccccCCchhhhHHHHhc--cCCCEEEeCCCC
Q 007533 294 EPVRIAMVGKYTGLSDAY-LSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLL--KGADGILVPGGF 370 (599)
Q Consensus 294 ~~v~IaiVGkY~~l~DaY-~SIi~AL~haG~~~~v~v~i~wi~s~~le~~~~~~~p~~y~~a~~~L--~~~DGIlVPGGf 370 (599)
++.+||++=....+.+.| ..+++.++.+..+....+.+.+ +.. +++.-....+.+ .++||||+.+..
T Consensus 60 ~~~~Igvi~~~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~--~~~--------~~~~~~~~~~~l~~~~vdgiIi~~~~ 129 (338)
T 3dbi_A 60 STQTLGLVVTNTLYHGIYFSELLFHAARMAEEKGRQLLLAD--GKH--------SAEEERQAIQYLLDLRCDAIMIYPRF 129 (338)
T ss_dssp CCSEEEEEECTTTTSTTHHHHHHHHHHHHHHHTTCEEEEEE--CTT--------SHHHHHHHHHHHHHTTCSEEEECCSS
T ss_pred CCCEEEEEecCCcccChhHHHHHHHHHHHHHHCCCEEEEEe--CCC--------ChHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 456899884321134444 3455555544443333333333 221 111111111222 589999998743
Q ss_pred CCCchhHHHHHHHHHHHcCCCEEEEe
Q 007533 371 GNRGVQGKILAAKYAREHRIPYLGIC 396 (599)
Q Consensus 371 G~rg~eg~i~aik~are~~iP~LGIC 396 (599)
.+ . -...+.+.+.++|+.-+.
T Consensus 130 ~~--~---~~~~~~~~~~~iPvV~~~ 150 (338)
T 3dbi_A 130 LS--V---DEIDDIIDAHSQPIMVLN 150 (338)
T ss_dssp SC--H---HHHHHHHHHCSSCEEEES
T ss_pred CC--h---HHHHHHHHcCCCCEEEEc
Confidence 32 1 123455566788976553
No 428
>2vk2_A YTFQ, ABC transporter periplasmic-binding protein YTFQ; transport protein, galactofuranose; HET: GZL; 1.20A {Escherichia coli}
Probab=27.32 E-value=2.1e+02 Score=27.45 Aligned_cols=33 Identities=24% Similarity=0.406 Sum_probs=21.1
Q ss_pred cCCCEEEeCCCCCCCchhHHHHHHHHHHHcCCCEEEE
Q 007533 359 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGI 395 (599)
Q Consensus 359 ~~~DGIlVPGGfG~rg~eg~i~aik~are~~iP~LGI 395 (599)
.++||||+.+.... ... ..++.+.+.++|+.-+
T Consensus 57 ~~vdgiIi~~~~~~-~~~---~~~~~~~~~~iPvV~~ 89 (306)
T 2vk2_A 57 QGVDAIFIAPVVAT-GWE---PVLKEAKDAEIPVFLL 89 (306)
T ss_dssp HTCSEEEECCSSSS-SCH---HHHHHHHHTTCCEEEE
T ss_pred cCCCEEEEeCCChh-hHH---HHHHHHHHCCCCEEEe
Confidence 58999999874322 112 2455566778998654
No 429
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=27.22 E-value=33 Score=32.42 Aligned_cols=31 Identities=26% Similarity=0.537 Sum_probs=22.9
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k 38 (599)
|-|+||||- +|||+.+ .+.|..+|++|..+-
T Consensus 12 ~~vlVtGas-ggiG~~l-----a~~l~~~G~~V~~~~ 42 (255)
T 1fmc_A 12 KCAIITGAG-AGIGKEI-----AITFATAGASVVVSD 42 (255)
T ss_dssp CEEEETTTT-SHHHHHH-----HHHHHTTTCEEEEEE
T ss_pred CEEEEECCc-cHHHHHH-----HHHHHHCCCEEEEEc
Confidence 679999984 7777754 455667899887754
No 430
>4eaq_A DTMP kinase, thymidylate kinase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, MTBI, transferase; HET: ATM; 1.85A {Staphylococcus aureus subsp} PDB: 4dwj_A* 4f4i_A
Probab=27.13 E-value=51 Score=31.56 Aligned_cols=31 Identities=19% Similarity=0.266 Sum_probs=26.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeE
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVT 35 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~ 35 (599)
++|+++|. +|-||+..+.-|...|.. |+.|.
T Consensus 27 ~~i~i~G~--~GsGKsT~~~~l~~~l~~-~~~~~ 57 (229)
T 4eaq_A 27 AFITFEGP--EGSGKTTVINEVYHRLVK-DYDVI 57 (229)
T ss_dssp EEEEEECC--TTSCHHHHHHHHHHHHTT-TSCEE
T ss_pred eEEEEEcC--CCCCHHHHHHHHHHHHhc-CCCce
Confidence 68999995 799999999999999877 76654
No 431
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=27.06 E-value=49 Score=32.04 Aligned_cols=33 Identities=15% Similarity=0.141 Sum_probs=25.0
Q ss_pred EEEEEeCCcc-CCcchHHHHHHHHHHHHHCCCeeEEeee
Q 007533 2 KYVLVTGGVV-SGLGKGVTASSIGVLLKACGLRVTCIKI 39 (599)
Q Consensus 2 k~i~vtggv~-s~~gkgi~~~s~g~ll~~~g~~v~~~k~ 39 (599)
|-++||||-- +|||+.+ .+.|..+|++|...-.
T Consensus 7 k~vlVTGas~~~gIG~~~-----a~~l~~~G~~V~~~~r 40 (275)
T 2pd4_A 7 KKGLIVGVANNKSIAYGI-----AQSCFNQGATLAFTYL 40 (275)
T ss_dssp CEEEEECCCSTTSHHHHH-----HHHHHTTTCEEEEEES
T ss_pred CEEEEECCCCCCcHHHHH-----HHHHHHCCCEEEEEeC
Confidence 7899999963 8999865 4567778998877533
No 432
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=26.91 E-value=58 Score=31.89 Aligned_cols=32 Identities=31% Similarity=0.440 Sum_probs=23.6
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 007533 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (599)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k 38 (599)
||-|+||||- |-+.+.+-..|..+|++|..+-
T Consensus 1 M~~ilVtGat------G~iG~~l~~~L~~~g~~V~~~~ 32 (330)
T 2c20_A 1 MNSILICGGA------GYIGSHAVKKLVDEGLSVVVVD 32 (330)
T ss_dssp -CEEEEETTT------SHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEECCC------cHHHHHHHHHHHhCCCEEEEEe
Confidence 6779999973 5556667777888899998763
No 433
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=26.91 E-value=40 Score=32.31 Aligned_cols=31 Identities=29% Similarity=0.565 Sum_probs=23.0
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k 38 (599)
|.|+|||| -+|||+-+ .+.|.++|++|...-
T Consensus 17 k~vlITGa-sggiG~~~-----a~~l~~~G~~V~~~~ 47 (278)
T 2bgk_A 17 KVAIITGG-AGGIGETT-----AKLFVRYGAKVVIAD 47 (278)
T ss_dssp CEEEEEST-TSHHHHHH-----HHHHHHTTCEEEEEE
T ss_pred CEEEEECC-CCHHHHHH-----HHHHHHCCCEEEEEc
Confidence 68999998 47777754 455667899888753
No 434
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=26.90 E-value=40 Score=32.72 Aligned_cols=31 Identities=32% Similarity=0.559 Sum_probs=23.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k 38 (599)
|-++||||- +|||+.++ +.|..+|++|...-
T Consensus 7 k~vlITGas-~gIG~aia-----~~l~~~G~~V~~~~ 37 (263)
T 2a4k_A 7 KTILVTGAA-SGIGRAAL-----DLFAREGASLVAVD 37 (263)
T ss_dssp CEEEEESTT-SHHHHHHH-----HHHHHTTCEEEEEE
T ss_pred CEEEEECCC-CHHHHHHH-----HHHHHCCCEEEEEe
Confidence 689999984 78887654 55677899987753
No 435
>1m7g_A Adenylylsulfate kinase; APS kinase, transferase, sulfate Met nucleotide 2 kinase; HET: AV2 ADX ADP; 1.43A {Penicillium chrysogenum} SCOP: c.37.1.4 PDB: 1d6j_A* 1m7h_A* 3cr7_A*
Probab=26.71 E-value=48 Score=30.79 Aligned_cols=37 Identities=22% Similarity=0.138 Sum_probs=29.8
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHH-HCCCeeEEeeec
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLK-ACGLRVTCIKID 40 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~-~~g~~v~~~k~d 40 (599)
++|+++|. +|-||-..+..|...|. ..|+++..+.-|
T Consensus 26 ~~i~~~G~--~GsGKsT~~~~l~~~l~~~~g~~~~~~~~d 63 (211)
T 1m7g_A 26 LTIWLTGL--SASGKSTLAVELEHQLVRDRRVHAYRLDGD 63 (211)
T ss_dssp EEEEEECS--TTSSHHHHHHHHHHHHHHHHCCCEEEECHH
T ss_pred CEEEEECC--CCCCHHHHHHHHHHHhccccCCcEEEECCh
Confidence 57889985 89999999999999998 888876555433
No 436
>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*
Probab=26.51 E-value=53 Score=31.98 Aligned_cols=30 Identities=50% Similarity=0.633 Sum_probs=21.8
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 007533 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (599)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~ 37 (599)
|| |+||||- |-+.+.+...|.++|++|..+
T Consensus 1 m~-vlVTGat------G~iG~~l~~~L~~~G~~V~~~ 30 (311)
T 2p5y_A 1 MR-VLVTGGA------GFIGSHIVEDLLARGLEVAVL 30 (311)
T ss_dssp CE-EEEETTT------SHHHHHHHHHHHTTTCEEEEE
T ss_pred CE-EEEEeCC------cHHHHHHHHHHHHCCCEEEEE
Confidence 55 8999974 445556667777889998765
No 437
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=26.47 E-value=37 Score=33.02 Aligned_cols=32 Identities=31% Similarity=0.522 Sum_probs=23.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~ 39 (599)
|-++||||- +|||+.+ .+.|..+|++|...=.
T Consensus 7 k~vlVTGas-~gIG~~i-----a~~l~~~G~~V~~~~r 38 (280)
T 1xkq_A 7 KTVIITGSS-NGIGRTT-----AILFAQEGANVTITGR 38 (280)
T ss_dssp CEEEETTCS-SHHHHHH-----HHHHHHTTCEEEEEES
T ss_pred CEEEEECCC-ChHHHHH-----HHHHHHCCCEEEEEeC
Confidence 789999984 7788765 4556678998876533
No 438
>3k9c_A Transcriptional regulator, LACI family protein; PSI-II, 11026W, structural genomics, PR structure initiative; 2.14A {Rhodococcus jostii}
Probab=26.25 E-value=66 Score=30.94 Aligned_cols=81 Identities=14% Similarity=0.183 Sum_probs=40.5
Q ss_pred CceEEEEEeecCCCcchHH-HHHHHHHHcCCcceeeeEEEEecCCCCCCccccCCchhhhHHHHhc--cCCCEEEeCCCC
Q 007533 294 EPVRIAMVGKYTGLSDAYL-SILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLL--KGADGILVPGGF 370 (599)
Q Consensus 294 ~~v~IaiVGkY~~l~DaY~-SIi~AL~haG~~~~v~v~i~wi~s~~le~~~~~~~p~~y~~a~~~L--~~~DGIlVPGGf 370 (599)
++.+||++= ...+.|. .+++.++.+..+....+.+.+.+.+.-+ .+..+.+ .++||||+.+..
T Consensus 11 ~~~~Igvi~---~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~-----------~~~~~~l~~~~vdgiIi~~~~ 76 (289)
T 3k9c_A 11 SSRLLGVVF---ELQQPFHGDLVEQIYAAATRRGYDVMLSAVAPSRAE-----------KVAVQALMRERCEAAILLGTR 76 (289)
T ss_dssp --CEEEEEE---ETTCHHHHHHHHHHHHHHHHTTCEEEEEEEBTTBCH-----------HHHHHHHTTTTEEEEEEETCC
T ss_pred CCCEEEEEE---ecCCchHHHHHHHHHHHHHHCCCEEEEEeCCCCHHH-----------HHHHHHHHhCCCCEEEEECCC
Confidence 456799884 3444544 5665555554444444444443322100 0111222 579999998743
Q ss_pred CCCchhHHHHHHHHHHHcCCCEEEE
Q 007533 371 GNRGVQGKILAAKYAREHRIPYLGI 395 (599)
Q Consensus 371 G~rg~eg~i~aik~are~~iP~LGI 395 (599)
.+. ..++.+.+ ++|+.-+
T Consensus 77 ~~~------~~~~~~~~-~iPvV~i 94 (289)
T 3k9c_A 77 FDT------DELGALAD-RVPALVV 94 (289)
T ss_dssp CCH------HHHHHHHT-TSCEEEE
T ss_pred CCH------HHHHHHHc-CCCEEEE
Confidence 321 33444444 8887655
No 439
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=26.24 E-value=54 Score=31.94 Aligned_cols=32 Identities=19% Similarity=0.262 Sum_probs=24.4
Q ss_pred EEEEEeCCcc-CCcchHHHHHHHHHHHHHCCCeeEEee
Q 007533 2 KYVLVTGGVV-SGLGKGVTASSIGVLLKACGLRVTCIK 38 (599)
Q Consensus 2 k~i~vtggv~-s~~gkgi~~~s~g~ll~~~g~~v~~~k 38 (599)
|-++||||-- +|||+.++ +.|..+|++|...-
T Consensus 22 k~vlVTGas~~~gIG~~ia-----~~l~~~G~~V~~~~ 54 (285)
T 2p91_A 22 KRALITGVANERSIAYGIA-----KSFHREGAQLAFTY 54 (285)
T ss_dssp CEEEECCCSSTTSHHHHHH-----HHHHHTTCEEEEEE
T ss_pred CEEEEECCCCCCcHHHHHH-----HHHHHcCCEEEEEe
Confidence 6799999964 79998654 55667899887653
No 440
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=26.21 E-value=1.4e+02 Score=29.76 Aligned_cols=68 Identities=16% Similarity=0.115 Sum_probs=33.6
Q ss_pred ceEEEEEeecCCCcchHHHHHHHHHHcCCcceeeeEEEEecCCCCCCccccC--CchhhhHHHHhcc--CCCEEEeCCC
Q 007533 295 PVRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKE--NPDAYKAAWKLLK--GADGILVPGG 369 (599)
Q Consensus 295 ~v~IaiVGkY~~l~DaY~SIi~AL~haG~~~~v~v~i~wi~s~~le~~~~~~--~p~~y~~a~~~L~--~~DGIlVPGG 369 (599)
++|||||| .+.. .-..+.++|.+.++++.. .|-...+.-..-.++ .+..|....+.+. ++|.|+++--
T Consensus 4 ~~rvgiiG-~G~~--~~~~~~~~l~~~~~~lva----v~d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~~D~V~i~tp 75 (336)
T 2p2s_A 4 KIRFAAIG-LAHN--HIYDMCQQLIDAGAELAG----VFESDSDNRAKFTSLFPSVPFAASAEQLITDASIDLIACAVI 75 (336)
T ss_dssp CCEEEEEC-CSST--HHHHHHHHHHHTTCEEEE----EECSCTTSCHHHHHHSTTCCBCSCHHHHHTCTTCCEEEECSC
T ss_pred ccEEEEEC-CChH--HHHHhhhhhcCCCcEEEE----EeCCCHHHHHHHHHhcCCCcccCCHHHHhhCCCCCEEEEeCC
Confidence 58999998 5532 222466777666554322 122111110000000 1223444445554 6899999763
No 441
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=26.14 E-value=35 Score=32.84 Aligned_cols=31 Identities=23% Similarity=0.474 Sum_probs=22.9
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k 38 (599)
|-++||||- +|||+.+ .+.|-.+|++|...-
T Consensus 13 k~vlVTGas-~gIG~~i-----a~~l~~~G~~V~~~~ 43 (256)
T 3gaf_A 13 AVAIVTGAA-AGIGRAI-----AGTFAKAGASVVVTD 43 (256)
T ss_dssp CEEEECSCS-SHHHHHH-----HHHHHHHTCEEEEEE
T ss_pred CEEEEECCC-CHHHHHH-----HHHHHHCCCEEEEEe
Confidence 679999985 7787754 455667799887653
No 442
>1e8c_A UDP-N-acetylmuramoylalanyl-D-glutamate--2,6- diaminopimelate ligase; peptidoglycan biosynthesis; HET: KCX UAG API; 2.00A {Escherichia coli} SCOP: c.98.1.1 c.59.1.1 c.72.2.1
Probab=26.12 E-value=70 Score=34.37 Aligned_cols=33 Identities=24% Similarity=0.206 Sum_probs=28.9
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k 38 (599)
|.|-||| +=||+.|++=|..+|++.|++|-.+.
T Consensus 109 ~vI~VTG----TnGKTTT~~ml~~iL~~~g~~~~~~g 141 (498)
T 1e8c_A 109 RLVGVTG----TNGKTTTTQLLAQWSQLLGEISAVMG 141 (498)
T ss_dssp EEEEEES----SSCHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred eEEEEeC----CcChHHHHHHHHHHHHhCCCCEEEEC
Confidence 6788888 56999999999999999999987654
No 443
>2if2_A Dephospho-COA kinase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; 3.00A {Aquifex aeolicus}
Probab=26.01 E-value=40 Score=30.82 Aligned_cols=23 Identities=35% Similarity=0.414 Sum_probs=17.1
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHH
Q 007533 1 MKYVLVTGGVVSGLGKGVTASSIGV 25 (599)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~~s~g~ 25 (599)
|+.|.|||+ +|-||..++..|..
T Consensus 1 m~~i~i~G~--~GsGKSTl~~~L~~ 23 (204)
T 2if2_A 1 MKRIGLTGN--IGCGKSTVAQMFRE 23 (204)
T ss_dssp CCEEEEEEC--TTSSHHHHHHHHHH
T ss_pred CeEEEEECC--CCcCHHHHHHHHHH
Confidence 778999998 78899765555443
No 444
>1y63_A LMAJ004144AAA protein; structural genomics, protein structure initiative, PSI, SGPP structural genomics of pathogenic protozoa consortium; HET: ADP; 1.70A {Leishmania major} SCOP: c.37.1.1
Probab=25.95 E-value=42 Score=30.55 Aligned_cols=22 Identities=36% Similarity=0.505 Sum_probs=15.9
Q ss_pred EEEEEeCCccCCcchHHHHHHHHH
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGV 25 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ 25 (599)
+.|++||+ +|-||..++.-+..
T Consensus 11 ~~I~l~G~--~GsGKSTv~~~La~ 32 (184)
T 1y63_A 11 INILITGT--PGTGKTSMAEMIAA 32 (184)
T ss_dssp CEEEEECS--TTSSHHHHHHHHHH
T ss_pred CEEEEECC--CCCCHHHHHHHHHH
Confidence 57999997 78899765554443
No 445
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=25.94 E-value=57 Score=31.34 Aligned_cols=33 Identities=21% Similarity=0.268 Sum_probs=24.9
Q ss_pred EEEEEeCCcc-CCcchHHHHHHHHHHHHHCCCeeEEeee
Q 007533 2 KYVLVTGGVV-SGLGKGVTASSIGVLLKACGLRVTCIKI 39 (599)
Q Consensus 2 k~i~vtggv~-s~~gkgi~~~s~g~ll~~~g~~v~~~k~ 39 (599)
|-++||||-- +|||+.+ .+.|..+|++|...-.
T Consensus 10 k~vlVTGas~~~gIG~~i-----a~~l~~~G~~V~~~~r 43 (265)
T 1qsg_A 10 KRILVTGVASKLSIAYGI-----AQAMHREGAELAFTYQ 43 (265)
T ss_dssp CEEEECCCCSTTSHHHHH-----HHHHHHTTCEEEEEES
T ss_pred CEEEEECCCCCCCHHHHH-----HHHHHHCCCEEEEEcC
Confidence 6799999964 7999865 4567778999876533
No 446
>1vi6_A 30S ribosomal protein S2P; structural genomics, ribosome; 1.95A {Archaeoglobus fulgidus} SCOP: c.23.15.1 PDB: 1vi5_A
Probab=25.89 E-value=3e+02 Score=26.60 Aligned_cols=78 Identities=19% Similarity=0.216 Sum_probs=49.6
Q ss_pred ceEEEEEeecCCCcchHHHHHHHHHHcCCcceeeeEEEEecCCCCCCccccCCchhhhHHHHhccCCCEEEeCCCCCCCc
Q 007533 295 PVRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRG 374 (599)
Q Consensus 295 ~v~IaiVGkY~~l~DaY~SIi~AL~haG~~~~v~v~i~wi~s~~le~~~~~~~p~~y~~a~~~L~~~DGIlVPGGfG~rg 374 (599)
.-+|.+||-- .-+-..|.++-+.+|+.. +.=+|+.- .|+.-.. +.+..+|.|+|.. + .
T Consensus 68 ~~~iLfVgTk---~~~~~~V~~~A~~~g~~~---v~~rwlgG-~LTN~~~-----------~~f~~PdlliV~D-p---~ 125 (208)
T 1vi6_A 68 PSKILLVAAR---QYAHKPVQMFSKVVGSDY---IVGRFIPG-TLTNPML-----------SEYREPEVVFVND-P---A 125 (208)
T ss_dssp GGGEEEEECS---GGGHHHHHHHHHHHCCEE---EESSCCTT-TTTCTTS-----------TTCCCCSEEEESC-T---T
T ss_pred CCEEEEEeCC---HHHHHHHHHHHHHhCCee---ecCEECCC-cccChhh-----------HhhCCCCEEEEEC-C---C
Confidence 4479999721 224556777777777654 23467653 2322111 2345789999885 1 1
Q ss_pred hhHHHHHHHHHHHcCCCEEEEe
Q 007533 375 VQGKILAAKYAREHRIPYLGIC 396 (599)
Q Consensus 375 ~eg~i~aik~are~~iP~LGIC 396 (599)
....++++|..-++|+.|+|
T Consensus 126 --~e~~ai~EA~~l~IPvIalv 145 (208)
T 1vi6_A 126 --IDKQAVSEATAVGIPVVALC 145 (208)
T ss_dssp --TTHHHHHHHHHTTCCEEEEE
T ss_pred --cchhHHHHHHHhCCCEEEEe
Confidence 23468899999999999998
No 447
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=25.89 E-value=38 Score=33.12 Aligned_cols=32 Identities=38% Similarity=0.522 Sum_probs=24.0
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~ 39 (599)
|.++||||- +|||+.+ .+.|-.+|++|...-.
T Consensus 29 k~~lVTGas-~GIG~ai-----a~~la~~G~~V~~~~r 60 (272)
T 4dyv_A 29 KIAIVTGAG-SGVGRAV-----AVALAGAGYGVALAGR 60 (272)
T ss_dssp CEEEETTTT-SHHHHHH-----HHHHHHTTCEEEEEES
T ss_pred CEEEEeCCC-cHHHHHH-----HHHHHHCCCEEEEEEC
Confidence 679999985 7787754 4567788999887643
No 448
>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*
Probab=25.85 E-value=53 Score=32.16 Aligned_cols=35 Identities=26% Similarity=0.291 Sum_probs=26.2
Q ss_pred EEEEEeCCc-cCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 007533 2 KYVLVTGGV-VSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (599)
Q Consensus 2 k~i~vtggv-~s~~gkgi~~~s~g~ll~~~g~~v~~~k~dp 41 (599)
|.++||||- -||||+.++ +.|..+|++|.+.-.+|
T Consensus 9 k~~lVTGas~~~GIG~aia-----~~la~~G~~V~~~~r~~ 44 (297)
T 1d7o_A 9 KRAFIAGIADDNGYGWAVA-----KSLAAAGAEILVGTWVP 44 (297)
T ss_dssp CEEEEECCSSSSSHHHHHH-----HHHHHTTCEEEEEEEHH
T ss_pred CEEEEECCCCCCChHHHHH-----HHHHHCCCeEEEeeccc
Confidence 679999996 489998654 55777899998764443
No 449
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=25.66 E-value=1.1e+02 Score=26.55 Aligned_cols=75 Identities=15% Similarity=0.186 Sum_probs=42.1
Q ss_pred CceEEEEEeecCCCcchHHHHHHHHHHcCCcceeeeEEEEecCCCCCCccccCCchhhhHHHHhc--cCCCEEEeCCCCC
Q 007533 294 EPVRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLL--KGADGILVPGGFG 371 (599)
Q Consensus 294 ~~v~IaiVGkY~~l~DaY~SIi~AL~haG~~~~v~v~i~wi~s~~le~~~~~~~p~~y~~a~~~L--~~~DGIlVPGGfG 371 (599)
+++||.+|+|-.. .-..+.+.|+..|+++.. .+.+- .+|.+.+ ..+|-|++==.
T Consensus 7 r~~rILiVdD~~~---~~~~l~~~L~~~G~~v~~-------~a~~g------------~eAl~~~~~~~~DlvllDi~-- 62 (123)
T 2lpm_A 7 RRLRVLVVEDESM---IAMLIEDTLCELGHEVAA-------TASRM------------QEALDIARKGQFDIAIIDVN-- 62 (123)
T ss_dssp CCCCEEEESSSTT---TSHHHHHHHHHHCCCCCB-------CSCCH------------HHHHHHHHHCCSSEEEECSS--
T ss_pred CCCEEEEEeCCHH---HHHHHHHHHHHCCCEEEE-------EECCH------------HHHHHHHHhCCCCEEEEecC--
Confidence 4689999986543 345667778888987621 11111 1233333 47898876211
Q ss_pred CCchhHHHHHHHHHHHcCCCEE
Q 007533 372 NRGVQGKILAAKYAREHRIPYL 393 (599)
Q Consensus 372 ~rg~eg~i~aik~are~~iP~L 393 (599)
-|+..| +.+++..|+.++|++
T Consensus 63 mP~~~G-~el~~~lr~~~ipvI 83 (123)
T 2lpm_A 63 LDGEPS-YPVADILAERNVPFI 83 (123)
T ss_dssp SSSCCS-HHHHHHHHHTCCSSC
T ss_pred CCCCCH-HHHHHHHHcCCCCEE
Confidence 111222 245667777788853
No 450
>1di6_A MOGA, molybdenum cofactor biosynthetic enzyme; MOCO, MOCO biosynthesis, gephyrin function; 1.45A {Escherichia coli} SCOP: c.57.1.1 PDB: 1di7_A
Probab=25.56 E-value=91 Score=29.64 Aligned_cols=32 Identities=19% Similarity=0.213 Sum_probs=19.6
Q ss_pred CCCEEEeCCCCCCCchhHHHHHHHHHHHcCCC
Q 007533 360 GADGILVPGGFGNRGVQGKILAAKYAREHRIP 391 (599)
Q Consensus 360 ~~DGIlVPGGfG~rg~eg~i~aik~are~~iP 391 (599)
++|-||.+||-|-...+-..++++.+.+..+|
T Consensus 66 ~~DlVitTGGtg~g~~D~T~ea~~~~~~~~l~ 97 (195)
T 1di6_A 66 SCHLVLTTGGTGPARRDVTPDATLAVADREMP 97 (195)
T ss_dssp CCSEEEEESCCSSSTTCCHHHHHHHTCSEECH
T ss_pred CCCEEEECCCCCCCCCccHHHHHHHHhcccCc
Confidence 69999999985543333344555555444455
No 451
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=25.56 E-value=55 Score=30.78 Aligned_cols=35 Identities=23% Similarity=0.290 Sum_probs=25.3
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCC-CeeEEeeecc
Q 007533 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACG-LRVTCIKIDP 41 (599)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~~s~g~ll~~~g-~~v~~~k~dp 41 (599)
||-|+||||- ++||+ .|-+.|..+| ++|..+-.+|
T Consensus 23 mk~vlVtGat-G~iG~-----~l~~~L~~~G~~~V~~~~R~~ 58 (236)
T 3qvo_A 23 MKNVLILGAG-GQIAR-----HVINQLADKQTIKQTLFARQP 58 (236)
T ss_dssp CEEEEEETTT-SHHHH-----HHHHHHTTCTTEEEEEEESSG
T ss_pred ccEEEEEeCC-cHHHH-----HHHHHHHhCCCceEEEEEcCh
Confidence 6889999974 44554 5556777889 8888876554
No 452
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=25.53 E-value=54 Score=33.55 Aligned_cols=89 Identities=17% Similarity=0.123 Sum_probs=47.1
Q ss_pred ceEEEEEeecCCCcchHHHHHHHHHHcCCcceeeeEEEEecCCCCCCcc--cc--CCchhhhHHHHhcc--CCCEEEeCC
Q 007533 295 PVRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDAT--EK--ENPDAYKAAWKLLK--GADGILVPG 368 (599)
Q Consensus 295 ~v~IaiVGkY~~l~DaY~SIi~AL~haG~~~~v~v~i~wi~s~~le~~~--~~--~~p~~y~~a~~~L~--~~DGIlVPG 368 (599)
++|||||| .+.. .-..+..+|.+.++++.. +-..+.+... .+ ..+..|....+.|. ++|.|+|+-
T Consensus 26 ~irvgiiG-~G~~--~~~~~~~~~~~~~~~lva------v~d~~~~~a~~~a~~~~~~~~~~~~~~ll~~~~vD~V~I~t 96 (361)
T 3u3x_A 26 ELRFAAVG-LNHN--HIYGQVNCLLRAGARLAG------FHEKDDALAAEFSAVYADARRIATAEEILEDENIGLIVSAA 96 (361)
T ss_dssp CCEEEEEC-CCST--THHHHHHHHHHTTCEEEE------EECSCHHHHHHHHHHSSSCCEESCHHHHHTCTTCCEEEECC
T ss_pred CcEEEEEC-cCHH--HHHHHHHHhhcCCcEEEE------EEcCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEEeC
Confidence 58999999 5533 223456777766655432 2221111100 00 01233444555565 489999987
Q ss_pred CC-------------CC---------CchhHHHHHHHHHHHcCCCE
Q 007533 369 GF-------------GN---------RGVQGKILAAKYAREHRIPY 392 (599)
Q Consensus 369 Gf-------------G~---------rg~eg~i~aik~are~~iP~ 392 (599)
-. |. ...+...++++.|+++++++
T Consensus 97 p~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~l 142 (361)
T 3u3x_A 97 VSSERAELAIRAMQHGKDVLVDKPGMTSFDQLAKLRRVQAETGRIF 142 (361)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEESCSCSSHHHHHHHHHHHHTTCCCE
T ss_pred ChHHHHHHHHHHHHCCCeEEEeCCCCCCHHHHHHHHHHHHHcCCEE
Confidence 42 21 12244556677777777764
No 453
>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*
Probab=25.35 E-value=43 Score=32.05 Aligned_cols=31 Identities=19% Similarity=0.306 Sum_probs=22.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHH---CCCeeEEee
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKA---CGLRVTCIK 38 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~---~g~~v~~~k 38 (599)
|.++||||- +|||+.+ .+.|.. +|++|...=
T Consensus 7 k~~lVTGas-~gIG~~i-----a~~l~~~~~~G~~V~~~~ 40 (259)
T 1oaa_A 7 AVCVLTGAS-RGFGRAL-----APQLARLLSPGSVMLVSA 40 (259)
T ss_dssp EEEEESSCS-SHHHHHH-----HHHHHTTBCTTCEEEEEE
T ss_pred cEEEEeCCC-ChHHHHH-----HHHHHHhhcCCCeEEEEe
Confidence 789999985 7888755 344555 799887653
No 454
>1dbq_A Purine repressor; transcription regulation, DNA-binding regulatory protein; 2.20A {Escherichia coli} SCOP: c.93.1.1 PDB: 1jhz_A
Probab=25.28 E-value=2e+02 Score=27.07 Aligned_cols=84 Identities=20% Similarity=0.265 Sum_probs=38.5
Q ss_pred CceEEEEEeecCCCcchHH-HHHHHHHHcCCcceeeeEEEEecCCCCCCccccCCchhhhHHHHhc--cCCCEEEeCCCC
Q 007533 294 EPVRIAMVGKYTGLSDAYL-SILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLL--KGADGILVPGGF 370 (599)
Q Consensus 294 ~~v~IaiVGkY~~l~DaY~-SIi~AL~haG~~~~v~v~i~wi~s~~le~~~~~~~p~~y~~a~~~L--~~~DGIlVPGGf 370 (599)
++.+||++-. ...+.|. .+++.++.+..+....+.+ .++.. +++...+..+.+ .++||||+.+..
T Consensus 6 ~~~~Ig~i~~--~~~~~~~~~~~~gi~~~~~~~g~~~~~--~~~~~--------~~~~~~~~~~~l~~~~vdgii~~~~~ 73 (289)
T 1dbq_A 6 HTKSIGLLAT--SSEAAYFAEIIEAVEKNCFQKGYTLIL--GNAWN--------NLEKQRAYLSMMAQKRVDGLLVMCSE 73 (289)
T ss_dssp --CEEEEEES--CTTSHHHHHHHHHHHHHHHHHTCEEEE--EECTT--------CHHHHHHHHHHHHHTTCSEEEEECSC
T ss_pred CCCEEEEEeC--CCCChHHHHHHHHHHHHHHHcCCeEEE--EcCCC--------ChHHHHHHHHHHHhCCCCEEEEEecc
Confidence 4568998843 3334443 4555555443333333222 23221 111111222222 589999997643
Q ss_pred CCCchhHHHHHHHHHHH-cCCCEEEE
Q 007533 371 GNRGVQGKILAAKYARE-HRIPYLGI 395 (599)
Q Consensus 371 G~rg~eg~i~aik~are-~~iP~LGI 395 (599)
.. +.. ++.+.+ .++|+.-+
T Consensus 74 ~~---~~~---~~~l~~~~~iPvV~~ 93 (289)
T 1dbq_A 74 YP---EPL---LAMLEEYRHIPMVVM 93 (289)
T ss_dssp CC---HHH---HHHHHHTTTSCEEEE
T ss_pred CC---HHH---HHHHHhccCCCEEEE
Confidence 22 122 223333 58887655
No 455
>1a7j_A Phosphoribulokinase; transferase, calvin cycle; 2.50A {Rhodobacter sphaeroides} SCOP: c.37.1.6
Probab=25.06 E-value=43 Score=33.49 Aligned_cols=41 Identities=22% Similarity=0.425 Sum_probs=31.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccccc
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLN 44 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~dpyln 44 (599)
+.|.|||| ||-||..+|..+...|...|+++..+-.|-|-.
T Consensus 6 ~iIgItG~--sGSGKSTva~~L~~~lg~~~~~~~vI~~D~~~r 46 (290)
T 1a7j_A 6 PIISVTGS--SGAGTSTVKHTFDQIFRREGVKAVSIEGDAFHR 46 (290)
T ss_dssp CEEEEESC--C---CCTHHHHHHHHHHHHTCCEEEEEGGGGBS
T ss_pred eEEEEECC--CCCCHHHHHHHHHHHHhhcCCCeeEeecchhhc
Confidence 36889996 788999999999998888888888888877653
No 456
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=25.03 E-value=44 Score=32.54 Aligned_cols=30 Identities=40% Similarity=0.682 Sum_probs=22.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~ 37 (599)
|-|+||||- +|||+.+ .+.|..+|++|..+
T Consensus 27 k~vlITGas-ggiG~~l-----a~~L~~~G~~V~~~ 56 (302)
T 1w6u_A 27 KVAFITGGG-TGLGKGM-----TTLLSSLGAQCVIA 56 (302)
T ss_dssp CEEEEETTT-SHHHHHH-----HHHHHHTTCEEEEE
T ss_pred CEEEEECCC-chHHHHH-----HHHHHHCCCEEEEE
Confidence 679999985 7777654 45677789998876
No 457
>4h08_A Putative hydrolase; GDSL-like lipase/acylhydrolase family protein, structural GE joint center for structural genomics, JCSG; HET: GOL; 1.80A {Bacteroides thetaiotaomicron}
Probab=24.87 E-value=60 Score=29.37 Aligned_cols=47 Identities=17% Similarity=0.203 Sum_probs=26.8
Q ss_pred CCCCcEEEEeeCcccccccc--chHHHHHHHhhhHc---CCCCEEEEeeeeeeee
Q 007533 137 EGPVDVCVIELGGTIGDIES--MPFIEALGQFSYRV---GPGNFCLIHVSLVPVL 186 (599)
Q Consensus 137 ~~~~dv~i~e~ggtvgdies--~pf~ea~rq~~~~~---g~~n~~~ihv~~vp~~ 186 (599)
..+||+++|.+|.- |+-. .-|.+.+++|-.++ ++ +...|-++..|..
T Consensus 72 ~~~pd~Vvi~~G~N--D~~~~~~~~~~~l~~ii~~l~~~~p-~~~ii~~~~~P~~ 123 (200)
T 4h08_A 72 NTKFDVIHFNNGLH--GFDYTEEEYDKSFPKLIKIIRKYAP-KAKLIWANTTPVR 123 (200)
T ss_dssp HSCCSEEEECCCSS--CTTSCHHHHHHHHHHHHHHHHHHCT-TCEEEEECCCCCE
T ss_pred cCCCCeEEEEeeeC--CCCCCHHHHHHHHHHHHHHHhhhCC-CccEEEeccCCCc
Confidence 35799999999964 5432 22555566554332 32 3444555555544
No 458
>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*
Probab=24.76 E-value=38 Score=32.66 Aligned_cols=35 Identities=29% Similarity=0.386 Sum_probs=26.5
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 007533 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (599)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~dp 41 (599)
||-|+||||- ++||+- +...|..+|++|...-.++
T Consensus 3 ~k~vlVTGas-g~IG~~-----la~~L~~~G~~V~~~~r~~ 37 (267)
T 3rft_A 3 MKRLLVTGAA-GQLGRV-----MRERLAPMAEILRLADLSP 37 (267)
T ss_dssp EEEEEEESTT-SHHHHH-----HHHHTGGGEEEEEEEESSC
T ss_pred CCEEEEECCC-CHHHHH-----HHHHHHhcCCEEEEEecCC
Confidence 4789999985 666664 5566778899998877665
No 459
>2grj_A Dephospho-COA kinase; TM1387, EC 2.7.1.24, dephosphocoenzyme kinase, structural genomics, joint center for structural GE JCSG; HET: ADP COD; 2.60A {Thermotoga maritima}
Probab=24.66 E-value=54 Score=30.74 Aligned_cols=26 Identities=38% Similarity=0.491 Sum_probs=17.2
Q ss_pred EEEEeCCccCCcchHHHHHHHHHHHHHC-CCee
Q 007533 3 YVLVTGGVVSGLGKGVTASSIGVLLKAC-GLRV 34 (599)
Q Consensus 3 ~i~vtggv~s~~gkgi~~~s~g~ll~~~-g~~v 34 (599)
.|.+||| +|=||-. +++.|+.+ |+.|
T Consensus 14 iIgltG~--~GSGKST----va~~L~~~lg~~v 40 (192)
T 2grj_A 14 VIGVTGK--IGTGKST----VCEILKNKYGAHV 40 (192)
T ss_dssp EEEEECS--TTSSHHH----HHHHHHHHHCCEE
T ss_pred EEEEECC--CCCCHHH----HHHHHHHhcCCEE
Confidence 5889999 5667854 45555555 7544
No 460
>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*
Probab=24.53 E-value=57 Score=31.33 Aligned_cols=32 Identities=31% Similarity=0.323 Sum_probs=24.0
Q ss_pred EEEEEeCCcc-CCcchHHHHHHHHHHHHHCCCeeEEee
Q 007533 2 KYVLVTGGVV-SGLGKGVTASSIGVLLKACGLRVTCIK 38 (599)
Q Consensus 2 k~i~vtggv~-s~~gkgi~~~s~g~ll~~~g~~v~~~k 38 (599)
|-++||||-- +|||+.++ +.|..+|++|...=
T Consensus 9 k~vlVTGas~~~gIG~~ia-----~~l~~~G~~V~~~~ 41 (261)
T 2wyu_A 9 KKALVMGVTNQRSLGFAIA-----AKLKEAGAEVALSY 41 (261)
T ss_dssp CEEEEESCCSSSSHHHHHH-----HHHHHHTCEEEEEE
T ss_pred CEEEEECCCCCCcHHHHHH-----HHHHHCCCEEEEEc
Confidence 6799999964 79998654 45666799887653
No 461
>2f6r_A COA synthase, bifunctional coenzyme A synthase; 18044849, bifunctional coenzyme A synthase (COA synthase), S genomics; HET: ACO UNL; 1.70A {Mus musculus}
Probab=24.53 E-value=47 Score=32.83 Aligned_cols=34 Identities=32% Similarity=0.383 Sum_probs=22.4
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccc
Q 007533 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPY 42 (599)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~dpy 42 (599)
++.|.|||+ +|-||..+|.-+ +..|+.| +-.|.+
T Consensus 75 ~~iI~I~G~--~GSGKSTva~~L----a~lg~~~--id~D~~ 108 (281)
T 2f6r_A 75 LYVLGLTGI--SGSGKSSVAQRL----KNLGAYI--IDSDHL 108 (281)
T ss_dssp CEEEEEEEC--TTSCHHHHHHHH----HHHTCEE--EEHHHH
T ss_pred CEEEEEECC--CCCCHHHHHHHH----HHCCCcE--EehhHH
Confidence 467999997 677897665554 4457643 555654
No 462
>3lkv_A Uncharacterized conserved domain protein; ATPase binding cassette, PSI, MCSG, structural genomics, Pro structure initiative; HET: PHE; 2.20A {Vibrio cholerae}
Probab=24.50 E-value=1.4e+02 Score=29.39 Aligned_cols=67 Identities=15% Similarity=0.163 Sum_probs=42.3
Q ss_pred CCceEEEEEeecCCCc---chHHHHHHHHHHcCCcceeeeEEEEecCCCCCCccccCCchhhhHHHHhc--cCCCEEEeC
Q 007533 293 HEPVRIAMVGKYTGLS---DAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLL--KGADGILVP 367 (599)
Q Consensus 293 ~~~v~IaiVGkY~~l~---DaY~SIi~AL~haG~~~~v~v~i~wi~s~~le~~~~~~~p~~y~~a~~~L--~~~DGIlVP 367 (599)
.+++||||+ .+.++. +++..+.++|+..|......+++.+-++. .|+.+-....+.+ +++|.|+..
T Consensus 6 ~~~~~igi~-q~~~hp~ld~~~~G~~~~L~~~G~~~g~nv~~~~~~a~--------gd~~~~~~~~~~l~~~~~DlIiai 76 (302)
T 3lkv_A 6 AKTAKVAVS-QIVEHPALDATRQGLLDGLKAKGYEEGKNLEFDYKTAQ--------GNPAIAVQIARQFVGENPDVLVGI 76 (302)
T ss_dssp -CCEEEEEE-ESCCCHHHHHHHHHHHHHHHHTTCCBTTTEEEEEEECT--------TCHHHHHHHHHHHHTTCCSEEEEE
T ss_pred cCCceEEEE-EeecChhHHHHHHHHHHHHHhhCcccCCcEEEEEEeCC--------CCHHHHHHHHHHHHhcCCcEEEEc
Confidence 367899999 687753 34567889999999877666666666554 2232222222332 578988754
Q ss_pred C
Q 007533 368 G 368 (599)
Q Consensus 368 G 368 (599)
|
T Consensus 77 ~ 77 (302)
T 3lkv_A 77 A 77 (302)
T ss_dssp S
T ss_pred C
Confidence 3
No 463
>2ioy_A Periplasmic sugar-binding protein; ribose binding protein, thermophilic proteins; HET: RIP; 1.90A {Thermoanaerobacter tengcongensis}
Probab=24.31 E-value=3e+02 Score=25.93 Aligned_cols=33 Identities=27% Similarity=0.298 Sum_probs=20.9
Q ss_pred cCCCEEEeCCCCCCCchhHHHHHHHHHHHcCCCEEEE
Q 007533 359 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGI 395 (599)
Q Consensus 359 ~~~DGIlVPGGfG~rg~eg~i~aik~are~~iP~LGI 395 (599)
.++||||+.+... ... ...++.+.+.++|+.-+
T Consensus 56 ~~vdgiIi~~~~~-~~~---~~~~~~~~~~~iPvV~~ 88 (283)
T 2ioy_A 56 QKVDVLLINPVDS-DAV---VTAIKEANSKNIPVITI 88 (283)
T ss_dssp TTCSEEEECCSST-TTT---HHHHHHHHHTTCCEEEE
T ss_pred cCCCEEEEeCCch-hhh---HHHHHHHHHCCCeEEEe
Confidence 5799999975321 111 23456677788998654
No 464
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=24.29 E-value=46 Score=34.07 Aligned_cols=32 Identities=22% Similarity=0.360 Sum_probs=24.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~ 39 (599)
|.++||||- +|||+.+ .+.|-.+|++|.+.=.
T Consensus 46 k~vlVTGas-~GIG~ai-----a~~La~~Ga~Vvl~~r 77 (346)
T 3kvo_A 46 CTVFITGAS-RGIGKAI-----ALKAAKDGANIVIAAK 77 (346)
T ss_dssp CEEEEETTT-SHHHHHH-----HHHHHTTTCEEEEEES
T ss_pred CEEEEeCCC-hHHHHHH-----HHHHHHCCCEEEEEEC
Confidence 789999996 7888754 4667788998877643
No 465
>3p94_A GDSL-like lipase; serine hydrolase, catalytic triad, flavodo structural genomics, joint center for structural genomics; HET: MSE PG4; 1.93A {Parabacteroides distasonis}
Probab=24.23 E-value=47 Score=29.77 Aligned_cols=59 Identities=17% Similarity=0.140 Sum_probs=33.7
Q ss_pred HHHHHHHHHHhcccCCCCCCCCcEEEEeeCccccccc-------cchHHHHHHHhhhHcCCCCEEEEeeeeeee
Q 007533 119 DEIQDWIERVAMIPVDGKEGPVDVCVIELGGTIGDIE-------SMPFIEALGQFSYRVGPGNFCLIHVSLVPV 185 (599)
Q Consensus 119 ~~i~~~i~~~~~~p~d~~~~~~dv~i~e~ggtvgdie-------s~pf~ea~rq~~~~~g~~n~~~ihv~~vp~ 185 (599)
..+.+++.+... ..+||+++|.+|. .|+- -.-|.+.+++|-..+...+.-.|-++..|.
T Consensus 60 ~~~~~~~~~~~~------~~~pd~vvi~~G~--ND~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~vil~~~~p~ 125 (204)
T 3p94_A 60 SEMLVRFRQDVI------NLKPKAVVILAGI--NDIAHNNGVIALENVFGNLVSMAELAKANHIKVIFCSVLPA 125 (204)
T ss_dssp HHHHHHHHHHTG------GGCEEEEEEECCH--HHHTTTTSCCCHHHHHHHHHHHHHHHHHTTCEEEEECCCCC
T ss_pred HHHHHHHHHHHH------hCCCCEEEEEeec--CccccccCCCCHHHHHHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 445555554321 3469999999985 3442 234666666665555434555555555553
No 466
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=24.19 E-value=70 Score=29.51 Aligned_cols=34 Identities=15% Similarity=0.273 Sum_probs=23.8
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHH-HCCCeeEEeeec
Q 007533 1 MKYVLVTGGVVSGLGKGVTASSIGVLLK-ACGLRVTCIKID 40 (599)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~~s~g~ll~-~~g~~v~~~k~d 40 (599)
||-|+||||- ++||+.++ +.|. ..|++|..+-.+
T Consensus 5 mk~vlVtGas-g~iG~~~~-----~~l~~~~g~~V~~~~r~ 39 (221)
T 3r6d_A 5 YXYITILGAA-GQIAQXLT-----ATLLTYTDMHITLYGRQ 39 (221)
T ss_dssp CSEEEEESTT-SHHHHHHH-----HHHHHHCCCEEEEEESS
T ss_pred EEEEEEEeCC-cHHHHHHH-----HHHHhcCCceEEEEecC
Confidence 5779999974 55665444 4444 899999887655
No 467
>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...
Probab=24.05 E-value=40 Score=34.03 Aligned_cols=30 Identities=30% Similarity=0.338 Sum_probs=22.8
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~ 37 (599)
|.|+||||- ||||+.++ +.|-.+|.+|..+
T Consensus 3 k~vlVTGas-~GIG~ala-----~~L~~~G~~v~~v 32 (327)
T 1jtv_A 3 TVVLITGCS-SGIGLHLA-----VRLASDPSQSFKV 32 (327)
T ss_dssp EEEEESCCS-SHHHHHHH-----HHHHTCTTCCEEE
T ss_pred CEEEEECCC-CHHHHHHH-----HHHHHCCCceEEE
Confidence 789999985 78887654 5677788877654
No 468
>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}
Probab=24.02 E-value=70 Score=28.97 Aligned_cols=33 Identities=27% Similarity=0.316 Sum_probs=23.6
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 007533 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (599)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~dp 41 (599)
|| |+||||- ++||+.++ +.|. +|++|..+-.++
T Consensus 4 M~-vlVtGas-g~iG~~~~-----~~l~-~g~~V~~~~r~~ 36 (202)
T 3d7l_A 4 MK-ILLIGAS-GTLGSAVK-----ERLE-KKAEVITAGRHS 36 (202)
T ss_dssp CE-EEEETTT-SHHHHHHH-----HHHT-TTSEEEEEESSS
T ss_pred cE-EEEEcCC-cHHHHHHH-----HHHH-CCCeEEEEecCc
Confidence 56 8999984 67776554 4455 799999875554
No 469
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=24.02 E-value=65 Score=31.00 Aligned_cols=34 Identities=18% Similarity=0.089 Sum_probs=23.1
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHC-CCeeEEeeecc
Q 007533 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKAC-GLRVTCIKIDP 41 (599)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~~s~g~ll~~~-g~~v~~~k~dp 41 (599)
|| |+||||- .+||+-+ -..|..+ |++|..+--+|
T Consensus 1 M~-ilVtGat-G~iG~~l-----~~~L~~~~g~~V~~~~R~~ 35 (289)
T 3e48_A 1 MN-IMLTGAT-GHLGTHI-----TNQAIANHIDHFHIGVRNV 35 (289)
T ss_dssp CC-EEEETTT-SHHHHHH-----HHHHHHTTCTTEEEEESSG
T ss_pred CE-EEEEcCC-chHHHHH-----HHHHhhCCCCcEEEEECCH
Confidence 55 8999975 4455544 4446666 99999886655
No 470
>2a6a_A Hypothetical protein TM0874; glycoprotein endopeptidase, structural genomics, JOI for structural genomics, JCSG; 2.50A {Thermotoga maritima} SCOP: c.55.1.9 c.55.1.9
Probab=24.00 E-value=51 Score=31.95 Aligned_cols=45 Identities=20% Similarity=0.197 Sum_probs=30.4
Q ss_pred ccCCCEEEeCCCCCCC-ch-hHHHHHHHHHHHcCCCEEEEehhHHHHH
Q 007533 358 LKGADGILVPGGFGNR-GV-QGKILAAKYAREHRIPYLGICLGMQVAV 403 (599)
Q Consensus 358 L~~~DGIlVPGGfG~r-g~-eg~i~aik~are~~iP~LGICLGmQll~ 403 (599)
+.+.|+|.++-|||.- |+ -|+..+--.|...++|++||+- ++.++
T Consensus 64 ~~dld~Iav~~GPGsfTGlRiG~~~Ak~La~~~~iPl~gVs~-l~a~a 110 (218)
T 2a6a_A 64 VKDLDVVGVGIGPGGLTGLRVGIATVVGLVSPYDIPVAPLNS-FEMTA 110 (218)
T ss_dssp GGGCSEEEEECCSSCHHHHHHHHHHHHHHHGGGTCCEEEECH-HHHHH
T ss_pred HHHCCEEEEEcCCCchHhHHHHHHHHHHHHHHcCCCEEEeCc-HHHHH
Confidence 4578999999999984 33 2333333335567999999995 55543
No 471
>4ag6_A VIRB4 ATPase, type IV secretory pathway VIRB4 components-like P; hydrolase, type IV secretion, conjugation; 2.35A {Thermoanaerobacter pseudethanolicus} PDB: 4ag5_A
Probab=23.93 E-value=75 Score=32.62 Aligned_cols=35 Identities=31% Similarity=0.308 Sum_probs=29.0
Q ss_pred EEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 007533 3 YVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (599)
Q Consensus 3 ~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~dp 41 (599)
.++|+| -||-||-.++..+-..+...|.+|.+ +||
T Consensus 37 ~~~i~G--~~G~GKs~~~~~~~~~~~~~~~~~~~--~D~ 71 (392)
T 4ag6_A 37 NWTILA--KPGAGKSFTAKMLLLREYMQGSRVII--IDP 71 (392)
T ss_dssp CEEEEC--CTTSSHHHHHHHHHHHHHTTTCCEEE--EES
T ss_pred ceEEEc--CCCCCHHHHHHHHHHHHHHCCCEEEE--EeC
Confidence 357777 58999999999998888889988877 476
No 472
>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A
Probab=23.87 E-value=75 Score=31.22 Aligned_cols=34 Identities=38% Similarity=0.427 Sum_probs=25.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~dp 41 (599)
|-|+||||- |-+.+.|-..|.++|++|...-.||
T Consensus 10 ~~vlVTGat------GfIG~~l~~~Ll~~G~~V~~~~r~~ 43 (338)
T 2rh8_A 10 KTACVVGGT------GFVASLLVKLLLQKGYAVNTTVRDP 43 (338)
T ss_dssp CEEEEECTT------SHHHHHHHHHHHHTTCEEEEEESCT
T ss_pred CEEEEECCc------hHHHHHHHHHHHHCCCEEEEEEcCc
Confidence 569999973 5666777777888999998754443
No 473
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=23.82 E-value=61 Score=30.98 Aligned_cols=31 Identities=19% Similarity=0.338 Sum_probs=23.4
Q ss_pred EEEEEeCCcc-CCcchHHHHHHHHHHHHHCCCeeEEe
Q 007533 2 KYVLVTGGVV-SGLGKGVTASSIGVLLKACGLRVTCI 37 (599)
Q Consensus 2 k~i~vtggv~-s~~gkgi~~~s~g~ll~~~g~~v~~~ 37 (599)
|.++||||-= ||||+.+ .+.|..+|++|.+.
T Consensus 8 k~vlVTGasg~~GIG~~i-----a~~l~~~G~~V~~~ 39 (266)
T 3oig_A 8 RNIVVMGVANKRSIAWGI-----ARSLHEAGARLIFT 39 (266)
T ss_dssp CEEEEECCCSTTSHHHHH-----HHHHHHTTCEEEEE
T ss_pred CEEEEEcCCCCCcHHHHH-----HHHHHHCCCEEEEe
Confidence 6899999864 7888854 46677789887654
No 474
>2qt1_A Nicotinamide riboside kinase 1; non-protein kinase, NAD+, NRK1, nicotinic acid riboside kinase activity, NAD biosynthesis; HET: NNR; 1.32A {Homo sapiens} PDB: 2qsy_A* 2qsz_A* 2qt0_A* 2p0e_A* 2qg6_A* 2ql6_A*
Probab=23.77 E-value=39 Score=31.10 Aligned_cols=37 Identities=19% Similarity=0.278 Sum_probs=26.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccccc
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLN 44 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~dpyln 44 (599)
+.|.|+|+ ||-||..++..|...+. .+..+-.|+|+-
T Consensus 22 ~~i~i~G~--~GsGKSTl~~~L~~~~~----~~~~i~~D~~~~ 58 (207)
T 2qt1_A 22 FIIGISGV--TNSGKTTLAKNLQKHLP----NCSVISQDDFFK 58 (207)
T ss_dssp EEEEEEES--TTSSHHHHHHHHHTTST----TEEEEEGGGGBC
T ss_pred eEEEEECC--CCCCHHHHHHHHHHhcC----CcEEEeCCcccc
Confidence 57889997 57889887776665432 467777888764
No 475
>2r47_A Uncharacterized protein MTH_862; unknown function, structural genomics, APC5901, PSI-2; 1.88A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=23.77 E-value=17 Score=33.93 Aligned_cols=104 Identities=16% Similarity=0.174 Sum_probs=58.6
Q ss_pred hhHHHHHHHhhhcCCCCceEEEEEeecCCCcchHHHHHHHHHHcCCcceeeeEEEEecCCCCCCcc-ccCCchhhhHHHH
Q 007533 278 LLKEWTSRAEICDGLHEPVRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDAT-EKENPDAYKAAWK 356 (599)
Q Consensus 278 ~l~~W~~l~~~~~~~~~~v~IaiVGkY~~l~DaY~SIi~AL~haG~~~~v~v~i~wi~s~~le~~~-~~~~p~~y~~a~~ 356 (599)
.|..++++++. .-+|+.+|-=+ .=...++.+.- .++. -+..+|+..++++.. .+-.+.-|.- .
T Consensus 15 ~L~~Fk~~v~~------~~kIvf~Gs~G----vCtPFaeL~~Y-aiR~---~~~~FiP~~d~e~a~~l~~~~~G~~~--~ 78 (157)
T 2r47_A 15 HLGVFREAVKD------AERIGFAGVPG----VCTPFAQLFAY-AVRD---KDNIFIPNTDFSKARKLEVTEYGVEL--G 78 (157)
T ss_dssp HHHHHHHHTTT------CSEEEEEECTT----TTHHHHHHHHH-HTTT---SEEEEEETTCGGGCEEEEEETTEEEE--E
T ss_pred HHHHHHHHhcC------CCeEEEECCCe----eecCHHhhhee-eeeC---CceEEcCCCChhHceEEEEecCceEe--c
Confidence 45556655433 34799988433 22344443322 3333 267788877776421 1101111110 0
Q ss_pred hc--cCCCEEEeCCCCCCCc----hhHHHHHHHHHHHcCCCEEEEeh
Q 007533 357 LL--KGADGILVPGGFGNRG----VQGKILAAKYAREHRIPYLGICL 397 (599)
Q Consensus 357 ~L--~~~DGIlVPGGfG~rg----~eg~i~aik~are~~iP~LGICL 397 (599)
.+ .++|.|+|-||-.-|. .+..-..++...+++..+.|||+
T Consensus 79 ~~~~~~~D~vVllGGLAMPk~~v~~e~v~~li~ki~~~~~kiiGvCF 125 (157)
T 2r47_A 79 EISPGNVDVLVLLGGLSMPGIGSDIEDVKKLVEDALEEGGELMGLCY 125 (157)
T ss_dssp EECCCCEEEEEEEGGGGSTTTSCCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cccCCCCCEEEEeccccCCCCCCCHHHHHHHHHHhhcCCCCEEEEEh
Confidence 11 5899999999955543 35666677776666677999996
No 476
>2qgz_A Helicase loader, putative primosome component; structural genomics, PSI-2, protein structure initiative; 2.40A {Streptococcus pyogenes serotype M3}
Probab=23.68 E-value=54 Score=32.94 Aligned_cols=61 Identities=21% Similarity=0.357 Sum_probs=42.9
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHH-HCCCeeEEeeeccccc-----CCCCC----CCccccceEEEccCC
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLK-ACGLRVTCIKIDPYLN-----TDAGT----MSPFEHGEVFVLDDG 64 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~-~~g~~v~~~k~dpyln-----~d~gt----msp~~hgevfv~~dg 64 (599)
+-++++|. +|.||=-+|.+|+..+. ..|++|..+-..-+++ .+.|. +.-+..-.|.++||=
T Consensus 153 ~~lll~G~--~GtGKT~La~aia~~~~~~~g~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~lLiiDdi 223 (308)
T 2qgz_A 153 KGLYLYGD--MGIGKSYLLAAMAHELSEKKGVSTTLLHFPSFAIDVKNAISNGSVKEEIDAVKNVPVLILDDI 223 (308)
T ss_dssp CEEEEECS--TTSSHHHHHHHHHHHHHHHSCCCEEEEEHHHHHHHHHCCCC----CCTTHHHHTSSEEEEETC
T ss_pred ceEEEECC--CCCCHHHHHHHHHHHHHHhcCCcEEEEEHHHHHHHHHHHhccchHHHHHHHhcCCCEEEEcCC
Confidence 35788997 79999999999999999 9999998776654433 22332 223344567888874
No 477
>3d3q_A TRNA delta(2)-isopentenylpyrophosphate transferase; alpha-beta protein, structural genomics, PSI-2; 2.70A {Staphylococcus epidermidis atcc 12228}
Probab=23.66 E-value=84 Score=32.60 Aligned_cols=44 Identities=18% Similarity=0.196 Sum_probs=32.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccc---ccCCCCCCCc
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPY---LNTDAGTMSP 52 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~dpy---ln~d~gtmsp 52 (599)
+.|+|+|+ ||-||-.+|..|...| | +.+|-.|-| -..|-||-.|
T Consensus 8 ~lI~I~Gp--tgSGKTtla~~La~~l---~--~~iis~Ds~qvYr~~~i~Takp 54 (340)
T 3d3q_A 8 FLIVIVGP--TASGKTELSIEVAKKF---N--GEIISGDSMQVYQGMDIGTAKV 54 (340)
T ss_dssp EEEEEECS--TTSSHHHHHHHHHHHT---T--EEEEECCSSTTBTTCCTTTTCC
T ss_pred ceEEEECC--CcCcHHHHHHHHHHHc---C--CceeccccccccccccccccCC
Confidence 37889997 7778988887776654 3 678888884 6677777554
No 478
>2vfb_A Arylamine N-acetyltransferase; NAT, acetyl COA, mycobacteria, actyltransferase; 2.00A {Mycobacterium marinum} PDB: 2vfc_A* 3ltw_A*
Probab=23.50 E-value=88 Score=31.35 Aligned_cols=53 Identities=23% Similarity=0.226 Sum_probs=40.1
Q ss_pred HHHHHHHHCCCeeEEeeecccccCCCCCC-CccccceEEEccCCcc----ccCCCCcc
Q 007533 22 SIGVLLKACGLRVTCIKIDPYLNTDAGTM-SPFEHGEVFVLDDGGE----VDLDLGNY 74 (599)
Q Consensus 22 s~g~ll~~~g~~v~~~k~dpyln~d~gtm-sp~~hgevfv~~dg~e----~dldlg~y 74 (599)
-.+.+|++.||+|+.+.---|.+-+++.- .|..|==..|+-||.. +|.=+|.+
T Consensus 76 Lf~~~L~~LGF~V~~~~arV~~~~~~~~~~~~~~H~~l~V~idg~~~~ylvDVGFG~~ 133 (280)
T 2vfb_A 76 LIGYVLAELGYRVRRLAGRVVWLAPPDAPTPAQTHTVLAVTFPGCQGPYLVDVGFGGM 133 (280)
T ss_dssp HHHHHHHHHTCEEEEEEEEECTTCCTTSCCCCSCEEEEEEECTTCSSCEEECSCSGGG
T ss_pred HHHHHHHHCCCeEEEEEEEEEeCCCCCCCCCCCCcEEEEEEECCeEEEEEEecCCCcc
Confidence 46789999999999987555655555433 5899999999999854 46666653
No 479
>1xx6_A Thymidine kinase; NESG, northeast structural genomics consortium, protein STRU initiative, PSI, structural genomics, DNA synthesis; HET: ADP; 2.00A {Clostridium acetobutylicum} SCOP: c.37.1.24 g.39.1.14
Probab=23.39 E-value=79 Score=29.69 Aligned_cols=33 Identities=15% Similarity=0.217 Sum_probs=25.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHH--CCCeeEEee
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKA--CGLRVTCIK 38 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~--~g~~v~~~k 38 (599)
|.+|+||- -|+|-|.+.++++... +|.+|-++|
T Consensus 9 ~i~v~~G~----mgsGKTT~ll~~a~r~~~~g~kV~v~k 43 (191)
T 1xx6_A 9 WVEVIVGP----MYSGKSEELIRRIRRAKIAKQKIQVFK 43 (191)
T ss_dssp EEEEEECS----TTSSHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred EEEEEECC----CCCcHHHHHHHHHHHHHHCCCEEEEEE
Confidence 56777774 3666688888887665 899999998
No 480
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=23.24 E-value=3.2e+02 Score=27.09 Aligned_cols=69 Identities=19% Similarity=0.171 Sum_probs=32.9
Q ss_pred CceEEEEEeecCCCcchHHHHHHHHHHcCCcceeeeEEEEecCCC-CCCcccc-CCchhhhHHHHhcc--CCCEEEeCCC
Q 007533 294 EPVRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACD-LEDATEK-ENPDAYKAAWKLLK--GADGILVPGG 369 (599)
Q Consensus 294 ~~v~IaiVGkY~~l~DaY~SIi~AL~haG~~~~v~v~i~wi~s~~-le~~~~~-~~p~~y~~a~~~L~--~~DGIlVPGG 369 (599)
+.+|||||| .+... ..++++|...+- ..+.-.|-.+.+ .+.-... ..+..|....+.+. ++|.|+++--
T Consensus 4 ~~~rigiiG-~G~ig---~~~~~~l~~~~~---~~~~av~d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~~D~V~i~tp 76 (329)
T 3evn_A 4 SKVRYGVVS-TAKVA---PRFIEGVRLAGN---GEVVAVSSRTLESAQAFANKYHLPKAYDKLEDMLADESIDVIYVATI 76 (329)
T ss_dssp -CEEEEEEB-CCTTH---HHHHHHHHHHCS---EEEEEEECSCSSTTCC---CCCCSCEESCHHHHHTCTTCCEEEECSC
T ss_pred CceEEEEEe-chHHH---HHHHHHHHhCCC---cEEEEEEcCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEECCC
Confidence 358999998 66442 245667665431 111112221111 1110000 11224555556665 7999998653
No 481
>2khz_A C-MYC-responsive protein RCL; flexible loop, nucleus, phosphoprotein, nuclear protein; NMR {Rattus norvegicus} PDB: 2klh_A*
Probab=23.21 E-value=1.7e+02 Score=26.81 Aligned_cols=95 Identities=19% Similarity=0.153 Sum_probs=54.8
Q ss_pred CceEEEEEeecCCC-cch--HHHHHHHHHHcCCcceeeeEEEEecCCCCCCcccc--CCc-hhhhHHHHhccCCCEEEeC
Q 007533 294 EPVRIAMVGKYTGL-SDA--YLSILKALLHASVDLRKKLVIDWIPACDLEDATEK--ENP-DAYKAAWKLLKGADGILVP 367 (599)
Q Consensus 294 ~~v~IaiVGkY~~l-~Da--Y~SIi~AL~haG~~~~v~v~i~wi~s~~le~~~~~--~~p-~~y~~a~~~L~~~DGIlVP 367 (599)
..+||=+-|.+... ++. +..+.+.|+..| .+.. ..|... .++....+ .+. .-|..-.+.+.++|.||.=
T Consensus 10 ~~~kVYLAGp~~~~~~~~~~~~~i~~~l~~~G-~V~~---~~~~~p-~~~~~g~~~~~~~~~i~~~d~~~i~~aD~vva~ 84 (165)
T 2khz_A 10 APCSVYFCGSIRGGREDQALYARIVSRLRRYG-KVLT---EHVADA-ELEPLGEEAAGGDQFIHEQDLNWLQQADVVVAE 84 (165)
T ss_dssp CCCEEEEECCCSSCSHHHHHHHHHHHHHHHHS-EESG---GGTTTT-SSSCCSTTSTTCHHHHHHHHHHHHHHCSEEEEE
T ss_pred CCeEEEEECCCCCcHHHHHHHHHHHHHHHhcC-Cccc---ccccCc-hhhccccccccCHHHHHHHHHHHHHhCCEEEEE
Confidence 35689998877643 233 668888999888 5421 112221 11110000 011 1133323458899999875
Q ss_pred CCCCCCchhHHHHHHHHHHHcCCCEEEEe
Q 007533 368 GGFGNRGVQGKILAAKYAREHRIPYLGIC 396 (599)
Q Consensus 368 GGfG~rg~eg~i~aik~are~~iP~LGIC 396 (599)
.+ ....|..--+-||...++|+++.+
T Consensus 85 ~~---~~d~Gt~~EiGyA~algKPVi~l~ 110 (165)
T 2khz_A 85 VT---QPSLGVGYELGRAVALGKPILCLF 110 (165)
T ss_dssp CS---SCCHHHHHHHHHHHHTCSSEEEEE
T ss_pred CC---CCCCCHHHHHHHHHHCCCEEEEEE
Confidence 44 334555556778889999999886
No 482
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=23.21 E-value=80 Score=30.94 Aligned_cols=33 Identities=18% Similarity=0.239 Sum_probs=24.1
Q ss_pred EEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 007533 3 YVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (599)
Q Consensus 3 ~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~dp 41 (599)
-|+||||- |-+.+.+-..|..+|++|..+-.+|
T Consensus 15 ~ilVtGat------G~iG~~l~~~L~~~g~~V~~~~r~~ 47 (342)
T 2x4g_A 15 KYAVLGAT------GLLGHHAARAIRAAGHDLVLIHRPS 47 (342)
T ss_dssp EEEEESTT------SHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred EEEEECCC------cHHHHHHHHHHHHCCCEEEEEecCh
Confidence 38999973 5555666777778899998875543
No 483
>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*
Probab=23.09 E-value=70 Score=31.53 Aligned_cols=34 Identities=32% Similarity=0.344 Sum_probs=24.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~dp 41 (599)
|-|+||||- |-+.+.+-..|.++|++|...-.||
T Consensus 6 ~~vlVTGat------GfIG~~l~~~L~~~G~~V~~~~r~~ 39 (337)
T 2c29_D 6 ETVCVTGAS------GFIGSWLVMRLLERGYTVRATVRDP 39 (337)
T ss_dssp CEEEETTTT------SHHHHHHHHHHHHTTCEEEEEESCT
T ss_pred CEEEEECCc------hHHHHHHHHHHHHCCCEEEEEECCc
Confidence 679999974 5555667777778999998654443
No 484
>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}
Probab=23.00 E-value=78 Score=30.80 Aligned_cols=35 Identities=17% Similarity=0.145 Sum_probs=25.1
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 007533 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (599)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~dp 41 (599)
+|-|+||||- |-+.+.+-..|.++|++|..+-.+|
T Consensus 12 ~~~vlVTGat------G~iG~~l~~~L~~~G~~V~~~~r~~ 46 (321)
T 2pk3_A 12 SMRALITGVA------GFVGKYLANHLTEQNVEVFGTSRNN 46 (321)
T ss_dssp -CEEEEETTT------SHHHHHHHHHHHHTTCEEEEEESCT
T ss_pred cceEEEECCC------ChHHHHHHHHHHHCCCEEEEEecCC
Confidence 4679999984 4555666677788899998875543
No 485
>1yrb_A ATP(GTP)binding protein; GTPase, P-loop, rossman fold, GDP, HYDR; HET: GDP; 1.75A {Pyrococcus abyssi} SCOP: c.37.1.10 PDB: 1yr6_A* 1yr8_A* 1yr9_A* 1yra_A* 1yr7_A* 2oxr_A*
Probab=22.90 E-value=95 Score=29.33 Aligned_cols=38 Identities=24% Similarity=0.443 Sum_probs=32.1
Q ss_pred EEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccccc
Q 007533 4 VLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLN 44 (599)
Q Consensus 4 i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~dpyln 44 (599)
++++| -.|.||=.++..++..|. .|++|.++-.||-.+
T Consensus 17 ~~~~G--kgGvGKTTl~~~La~~l~-~g~~v~vvd~D~~~~ 54 (262)
T 1yrb_A 17 VVFVG--TAGSGKTTLTGEFGRYLE-DNYKVAYVNLDTGVK 54 (262)
T ss_dssp EEEEC--STTSSHHHHHHHHHHHHT-TTSCEEEEECCSSCS
T ss_pred EEEeC--CCCCCHHHHHHHHHHHHH-CCCeEEEEeCCCCcc
Confidence 44444 478999999999999999 999999999999654
No 486
>3h5o_A Transcriptional regulator GNTR; transcription regulator, GNTR,chromobacterium violaceum, PSI, SGX, DNA-binding; 2.30A {Chromobacterium violaceum}
Probab=22.85 E-value=2.5e+02 Score=27.48 Aligned_cols=31 Identities=19% Similarity=0.349 Sum_probs=20.8
Q ss_pred cCCCEEEeCCCCCCCchhHHHHHHHHHHHcCCCEEEE
Q 007533 359 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGI 395 (599)
Q Consensus 359 ~~~DGIlVPGGfG~rg~eg~i~aik~are~~iP~LGI 395 (599)
.++||||+.+..... ..++.+.+.++|+.-+
T Consensus 117 ~~vdGiIi~~~~~~~------~~~~~l~~~~iPvV~~ 147 (339)
T 3h5o_A 117 HRPDGVLITGLSHAE------PFERILSQHALPVVYM 147 (339)
T ss_dssp TCCSEEEEECSCCCT------THHHHHHHTTCCEEEE
T ss_pred CCCCEEEEeCCCCCH------HHHHHHhcCCCCEEEE
Confidence 589999998743222 2345566778998755
No 487
>3hs3_A Ribose operon repressor; PSI-II, NYSGXRC, periplasmic binding protein, structural genomics, protein structure initiative; 1.60A {Lactobacillus acidophilus}
Probab=22.47 E-value=47 Score=31.78 Aligned_cols=26 Identities=15% Similarity=0.148 Sum_probs=16.5
Q ss_pred cCCCEEEeCCCCCCCchhHHHHHHHHHHHcCCCEEEE
Q 007533 359 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGI 395 (599)
Q Consensus 359 ~~~DGIlVPGGfG~rg~eg~i~aik~are~~iP~LGI 395 (599)
.++||||+.+ +. ++.+.+.++|+.-+
T Consensus 66 ~~vdgiIi~~----~~-------~~~~~~~~iPvV~~ 91 (277)
T 3hs3_A 66 NNVDGIITSA----FT-------IPPNFHLNTPLVMY 91 (277)
T ss_dssp TTCSEEEEEC----CC-------CCTTCCCSSCEEEE
T ss_pred CCCCEEEEcc----hH-------HHHHHhCCCCEEEE
Confidence 5899999987 11 22344567786544
No 488
>1jjv_A Dephospho-COA kinase; P-loop nucleotide-binding fold, structure 2 function project, S2F, structural genomics, transferase; HET: ATP; 2.00A {Haemophilus influenzae} SCOP: c.37.1.1
Probab=22.34 E-value=67 Score=29.40 Aligned_cols=27 Identities=33% Similarity=0.421 Sum_probs=18.3
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCe
Q 007533 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLR 33 (599)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~ 33 (599)
|+.|.+||+ +|-||..+ +++|...|+.
T Consensus 2 ~~~i~l~G~--~GsGKST~----~~~La~lg~~ 28 (206)
T 1jjv_A 2 TYIVGLTGG--IGSGKTTI----ANLFTDLGVP 28 (206)
T ss_dssp CEEEEEECS--TTSCHHHH----HHHHHTTTCC
T ss_pred CcEEEEECC--CCCCHHHH----HHHHHHCCCc
Confidence 367899998 67889654 5555545654
No 489
>2ze6_A Isopentenyl transferase; crown GALL tumor, cytokinin biosynthesis; HET: DST AMP; 2.10A {Agrobacterium tumefaciens} PDB: 2ze5_A* 2ze7_A* 2ze8_A
Probab=22.27 E-value=1.1e+02 Score=29.43 Aligned_cols=45 Identities=24% Similarity=0.273 Sum_probs=30.6
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecc---cccCCCCCCCc
Q 007533 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDP---YLNTDAGTMSP 52 (599)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k~dp---yln~d~gtmsp 52 (599)
|+.|+|+|. +|-||-.+|..|..-| |+. .+-.|- |-+.|-||..|
T Consensus 1 M~li~I~G~--~GSGKSTla~~La~~~---~~~--~i~~D~~~~~~~~~~~t~~~ 48 (253)
T 2ze6_A 1 MLLHLIYGP--TCSGKTDMAIQIAQET---GWP--VVALDRVQCCPQIATGSGRP 48 (253)
T ss_dssp CEEEEEECC--TTSSHHHHHHHHHHHH---CCC--EEECCSGGGCGGGTTTTTCC
T ss_pred CeEEEEECC--CCcCHHHHHHHHHhcC---CCe--EEeccHHhccCCCccccCCC
Confidence 788999995 8999988888776544 443 334443 44556677666
No 490
>3lkb_A Probable branched-chain amino acid ABC transporter, amino acid binding protein; branched amino acid, PSI-II, NYSGXRC, structural genomics; 2.40A {Thermus thermophilus}
Probab=22.25 E-value=2e+02 Score=28.61 Aligned_cols=91 Identities=11% Similarity=0.014 Sum_probs=47.9
Q ss_pred CCceEEEEEeecCCCcchH-HHHH----HHHHH---cCCcceeeeEEEEecCCCCCCccccCCchhhhHHHHh-c--cCC
Q 007533 293 HEPVRIAMVGKYTGLSDAY-LSIL----KALLH---ASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKL-L--KGA 361 (599)
Q Consensus 293 ~~~v~IaiVGkY~~l~DaY-~SIi----~AL~h---aG~~~~v~v~i~wi~s~~le~~~~~~~p~~y~~a~~~-L--~~~ 361 (599)
.++++||++...+.-...+ ..+. -|++. .|--...++++.+.++.. +|+.-..+.+. + .++
T Consensus 5 ~~~i~IG~~~p~sG~~a~~g~~~~~g~~~a~~~iN~~ggi~G~~i~l~~~D~~~--------~~~~~~~~~~~li~~~~V 76 (392)
T 3lkb_A 5 QQQVTLFWSGAITGPTSDAGAPYGAAVEDYCKWANERKLVPGVVFNCVVRDDQY--------NNANTQRFFEEAVDRFKI 76 (392)
T ss_dssp CEEEEEEEEECSSSTTHHHHHHHHHHHHHHHHHHHHHTSSTTEEEEEEEEECTT--------CHHHHHHHHHHHHHTTCC
T ss_pred CCceEEEEEecccCchhhcChhHHHHHHHHHHHHHhcCCcCCeEeEEEEecCCC--------CHHHHHHHHHHHHhhcCc
Confidence 3579999997654322111 1233 33333 221124567777766542 23322222222 2 379
Q ss_pred CEEEeCCCCCCCchhHHHHHHHHHHHcCCCEEEEeh
Q 007533 362 DGILVPGGFGNRGVQGKILAAKYAREHRIPYLGICL 397 (599)
Q Consensus 362 DGIlVPGGfG~rg~eg~i~aik~are~~iP~LGICL 397 (599)
|+||. ++ ......++..+.+.++|++..+.
T Consensus 77 ~~iig---~~---s~~~~~~~~~~~~~~iP~i~~~~ 106 (392)
T 3lkb_A 77 PVFLS---YA---TGANLQLKPLIQELRIPTIPASM 106 (392)
T ss_dssp SCEEE---CC---HHHHHHHHHHHHHHTCCEEESCC
T ss_pred EEEEe---CC---cHHHHHHHHHHHhCCceEEeccc
Confidence 99984 22 22234556677788999998553
No 491
>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A
Probab=22.23 E-value=58 Score=31.13 Aligned_cols=31 Identities=29% Similarity=0.290 Sum_probs=23.3
Q ss_pred EEEEEeCCcc-CCcchHHHHHHHHHHHHHCCCeeEEe
Q 007533 2 KYVLVTGGVV-SGLGKGVTASSIGVLLKACGLRVTCI 37 (599)
Q Consensus 2 k~i~vtggv~-s~~gkgi~~~s~g~ll~~~g~~v~~~ 37 (599)
|.++||||-= +|||+. +.+.|-.+|.+|..+
T Consensus 21 k~vlITGas~~~giG~~-----~a~~l~~~G~~v~~~ 52 (267)
T 3gdg_A 21 KVVVVTGASGPKGMGIE-----AARGCAEMGAAVAIT 52 (267)
T ss_dssp CEEEETTCCSSSSHHHH-----HHHHHHHTSCEEEEC
T ss_pred CEEEEECCCCCCChHHH-----HHHHHHHCCCeEEEE
Confidence 7899999954 788874 456677789887664
No 492
>1duv_G Octase-1, ornithine transcarbamoylase; enzyme-inhibitor complex, transferase; HET: PSQ; 1.70A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1akm_A* 2otc_A*
Probab=21.94 E-value=3.9e+02 Score=27.48 Aligned_cols=125 Identities=16% Similarity=0.142 Sum_probs=71.6
Q ss_pred hHHHHHHHhhhHcCCCCEEEEeeeeeeeecCCCccccCCchhhhhhhhcCCCcccEEEEecCCCCChhhhhccccCCCCC
Q 007533 158 PFIEALGQFSYRVGPGNFCLIHVSLVPVLNVVGEQKTKPTQHSVRGLRGQGLTPNILACRSTVALDDNVKGKLSQFCHVP 237 (599)
Q Consensus 158 pf~ea~rq~~~~~g~~n~~~ihv~~vp~~~~~~e~ktkptq~sv~~Lrs~Gi~pd~iv~R~~~~l~~~~~~Kislfc~v~ 237 (599)
-|--|++|| | .++.++-. +.+.=.|--+...+++-|.+. .|+|++|... ...-+.+|-++.||
T Consensus 61 SFE~A~~~L----G-g~~i~l~~------~~ss~~kgEsl~DTarvLs~~---~D~IviR~~~---~~~~~~lA~~~~vP 123 (333)
T 1duv_G 61 SFEVAAYDQ----G-ARVTYLGP------SGSQIGHKESIKDTARVLGRM---YDGIQYRGYG---QEIVETLAEYASVP 123 (333)
T ss_dssp HHHHHHHHT----T-CEEEEECS------SSSCBTTTBCHHHHHHHHTTT---CSEEEEECSC---HHHHHHHHHHHSSC
T ss_pred HHHHHHHHc----C-CeEEEECC------ccccCcCCCcHHHHHHHHHHh---CCEEEEEcCC---chHHHHHHHhCCCC
Confidence 466677765 4 33443321 122223444777788888666 5999999864 55666677777665
Q ss_pred CCCeeeeCCCCCccchhHHHHHHHHHHHHHcCCCCCCCchhhHHHHHHHhhhcCCCCceEEEEEeecCCCcchHHHHHHH
Q 007533 238 EQNIITLYDVPNIWHIPLLLRKAHEAIFKVLNLQGTTKEPLLKEWTSRAEICDGLHEPVRIAMVGKYTGLSDAYLSILKA 317 (599)
Q Consensus 238 ~~~Vi~~~dv~tiy~vPl~L~g~~~~i~~~l~l~~~~~~~~l~~W~~l~~~~~~~~~~v~IaiVGkY~~l~DaY~SIi~A 317 (599)
||+.-+ ..+|=...|--++ -|.++ + ....-+.++|++||+- ....=.|.+.+
T Consensus 124 ---VINa~~--~~~HPtQ~LaDl~-Ti~e~-----------------~---~g~~l~gl~ia~vGD~--~~~va~Sl~~~ 175 (333)
T 1duv_G 124 ---VWNGLT--NEFHPTQLLADLL-TMQEH-----------------L---PGKAFNEMTLVYAGDA--RNNMGNSMLEA 175 (333)
T ss_dssp ---EEESCC--SSCCHHHHHHHHH-HHHHH-----------------S---TTCCGGGCEEEEESCT--TSHHHHHHHHH
T ss_pred ---eEcCCC--CCCCchHHHHHHH-HHHHH-----------------h---cCCCCCCcEEEEECCC--ccchHHHHHHH
Confidence 777543 5555443331111 01111 0 1101245899999984 12355688888
Q ss_pred HHHcCCccee
Q 007533 318 LLHASVDLRK 327 (599)
Q Consensus 318 L~haG~~~~v 327 (599)
+...|+++.+
T Consensus 176 ~~~~G~~v~~ 185 (333)
T 1duv_G 176 AALTGLDLRL 185 (333)
T ss_dssp HHHHCCEEEE
T ss_pred HHHcCCEEEE
Confidence 8888887654
No 493
>1w5r_A Arylamine N-acetyltransferase; acyltransferase; 1.45A {Mycobacterium smegmatis} SCOP: d.3.1.5 PDB: 1w6f_A* 1gx3_A
Probab=21.91 E-value=91 Score=31.17 Aligned_cols=52 Identities=19% Similarity=0.261 Sum_probs=39.3
Q ss_pred HHHHHHHHCCCeeEEeeecccccCCCCCC-CccccceEEEccCCcc----ccCCCCc
Q 007533 22 SIGVLLKACGLRVTCIKIDPYLNTDAGTM-SPFEHGEVFVLDDGGE----VDLDLGN 73 (599)
Q Consensus 22 s~g~ll~~~g~~v~~~k~dpyln~d~gtm-sp~~hgevfv~~dg~e----~dldlg~ 73 (599)
-.+.+|++.||+|+.+.-=-|.+-+++.- .|..|==..|+-||.. +|.=+|.
T Consensus 79 Lf~~~L~~LGF~V~~~~arV~~~~~~~~~~~~~~H~~l~V~idg~~~~ylvDVGFG~ 135 (278)
T 1w5r_A 79 LLGYVLEELGFEVERLSGRVVWMRADDAPLPAQTHNVLSVAVPGADGRYLVDVGFGG 135 (278)
T ss_dssp HHHHHHHHHTCEEEEEEEEECTTCCTTCCCCCEEEEEEEEECSSCSCCEEECSCSCT
T ss_pred HHHHHHHHcCCeEEEEEEEEeeCCCCCCCCCCCccEEEEEEECCeEEEEEEecCCCc
Confidence 46789999999999987655655554432 5899999999999854 4666665
No 494
>2wtz_A UDP-N-acetylmuramoyl-L-alanyl-D-glutamate- -2,6-diaminopimelate ligase; nucleotide-binding, peptidoglycan synthesis, MURE, C shape; HET: KCX UAG; 3.00A {Mycobacterium tuberculosis} PDB: 2xja_A*
Probab=21.88 E-value=88 Score=34.03 Aligned_cols=33 Identities=27% Similarity=0.253 Sum_probs=28.9
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 007533 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (599)
Q Consensus 2 k~i~vtggv~s~~gkgi~~~s~g~ll~~~g~~v~~~k 38 (599)
|.|-||| +=||+.|++=|..+|++.|++|-.+.
T Consensus 147 ~vI~VTG----TnGKTTT~~ml~~iL~~~G~~~g~~g 179 (535)
T 2wtz_A 147 TVIGITG----TSGKTTTTYLVEAGLRAAGRVAGLIG 179 (535)
T ss_dssp EEEEEES----SSCHHHHHHHHHHHHHHTTCCEEEES
T ss_pred eEEEeeC----CCChHHHHHHHHHHHHHCCCCEEEEC
Confidence 6788888 56999999999999999999987653
No 495
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=21.87 E-value=3e+02 Score=27.57 Aligned_cols=63 Identities=13% Similarity=0.125 Sum_probs=32.7
Q ss_pred CceEEEEEeecCCCcchHHHHHHHHHHc-CCcceeeeEEEEecCCCCCCccccCCchhhhHHHHhc---cCCCEEEeCCC
Q 007533 294 EPVRIAMVGKYTGLSDAYLSILKALLHA-SVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLL---KGADGILVPGG 369 (599)
Q Consensus 294 ~~v~IaiVGkY~~l~DaY~SIi~AL~ha-G~~~~v~v~i~wi~s~~le~~~~~~~p~~y~~a~~~L---~~~DGIlVPGG 369 (599)
+++|||||| .+.. +....+++|... ++ ++..+-+.+.+... ...|....+.| .++|.|+++-.
T Consensus 24 ~~~rvgiiG-~G~i--g~~~~~~~l~~~~~~------~lvav~d~~~~~~g----~~~~~~~~~ll~~~~~vD~V~i~tp 90 (330)
T 4ew6_A 24 SPINLAIVG-VGKI--VRDQHLPSIAKNANF------KLVATASRHGTVEG----VNSYTTIEAMLDAEPSIDAVSLCMP 90 (330)
T ss_dssp CCEEEEEEC-CSHH--HHHTHHHHHHHCTTE------EEEEEECSSCCCTT----SEEESSHHHHHHHCTTCCEEEECSC
T ss_pred CCceEEEEe-cCHH--HHHHHHHHHHhCCCe------EEEEEEeCChhhcC----CCccCCHHHHHhCCCCCCEEEEeCC
Confidence 468999998 5522 111356777664 22 22333332222211 11344444444 46999999874
No 496
>4evq_A Putative ABC transporter subunit, substrate-bindi component; structural genomics, PSI-biology, midwest center for structu genomics; HET: MSE PHB; 1.40A {Rhodopseudomonas palustris} PDB: 4evr_A
Probab=21.80 E-value=3.6e+02 Score=26.33 Aligned_cols=90 Identities=14% Similarity=0.055 Sum_probs=47.4
Q ss_pred CceEEEEEeecCCCcch-HHHHH----HHHHHcC-CcceeeeEEEEecCCCCCCccccCCchhhhHHHHhc---cCCCEE
Q 007533 294 EPVRIAMVGKYTGLSDA-YLSIL----KALLHAS-VDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLL---KGADGI 364 (599)
Q Consensus 294 ~~v~IaiVGkY~~l~Da-Y~SIi----~AL~haG-~~~~v~v~i~wi~s~~le~~~~~~~p~~y~~a~~~L---~~~DGI 364 (599)
++++||++...+..... ...+. .+++..+ .-...++++.+.++.. +|+.-..+.+.| +++|+|
T Consensus 15 ~~i~IG~~~p~sg~~~~~~~~~~~g~~~a~~~~ng~~~g~~~~l~~~d~~~--------~~~~~~~~~~~l~~~~~v~~i 86 (375)
T 4evq_A 15 GALKVGLLLPYSGTYAPLGEAITRGLELYVQSQGGKLGGRSISFVKVDDES--------APPKATELTTKLIQSEKADVL 86 (375)
T ss_dssp CCEEEEEEECSSSTTHHHHHHHHHHHHHHHHHTTTEETTEEEEEEEEECTT--------CHHHHHHHHHCCCCCSCCSEE
T ss_pred CCeEEEEEeCCCCcchhcCHHHHHHHHHHHHHhCCCcCCEEEEEEEecCCC--------CHHHHHHHHHHHHhcCCceEE
Confidence 57999999654322112 22344 4444443 1113445666666532 232222222333 378999
Q ss_pred EeCCCCCCCchhHHHHHHHHHHHcCCCEEEEe
Q 007533 365 LVPGGFGNRGVQGKILAAKYAREHRIPYLGIC 396 (599)
Q Consensus 365 lVPGGfG~rg~eg~i~aik~are~~iP~LGIC 396 (599)
|.|.+. .....+...+.+.++|++..+
T Consensus 87 ig~~~s-----~~~~~~~~~~~~~~iP~v~~~ 113 (375)
T 4evq_A 87 IGTVHS-----GVAMAMVKIAREDGIPTIVPN 113 (375)
T ss_dssp EECSSH-----HHHHHHHHHHHHHCCCEEESS
T ss_pred EcCCcc-----HHHHHHHHHHHHcCceEEecC
Confidence 976532 123345566777899998765
No 497
>3trf_A Shikimate kinase, SK; amino acid biosynthesis, transferase; 2.60A {Coxiella burnetii}
Probab=21.78 E-value=66 Score=28.77 Aligned_cols=25 Identities=24% Similarity=0.360 Sum_probs=19.7
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHH
Q 007533 1 MKYVLVTGGVVSGLGKGVTASSIGVLL 27 (599)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~~s~g~ll 27 (599)
++.|+++|. ||-||..+|.-|...|
T Consensus 5 ~~~i~l~G~--~GsGKst~a~~La~~l 29 (185)
T 3trf_A 5 LTNIYLIGL--MGAGKTSVGSQLAKLT 29 (185)
T ss_dssp CCEEEEECS--TTSSHHHHHHHHHHHH
T ss_pred CCEEEEECC--CCCCHHHHHHHHHHHh
Confidence 357899997 9999988877776654
No 498
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=21.77 E-value=61 Score=31.88 Aligned_cols=39 Identities=26% Similarity=0.270 Sum_probs=26.2
Q ss_pred EEEEEeCCcc----------CCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 007533 2 KYVLVTGGVV----------SGLGKGVTASSIGVLLKACGLRVTCIKID 40 (599)
Q Consensus 2 k~i~vtggv~----------s~~gkgi~~~s~g~ll~~~g~~v~~~k~d 40 (599)
|-|+||||=- |--=-|-...+|...|..+|++|+.+--.
T Consensus 4 k~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~ 52 (232)
T 2gk4_A 4 MKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTK 52 (232)
T ss_dssp CEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 5689999942 11112334456678888999999988544
No 499
>3h5t_A Transcriptional regulator, LACI family; DNA-dependent, protein structure initiative II(PSI II), NYSGXRC, 11232D), structural genomics; 2.53A {Corynebacterium glutamicum}
Probab=21.72 E-value=2.8e+02 Score=27.45 Aligned_cols=85 Identities=14% Similarity=0.084 Sum_probs=44.6
Q ss_pred CceEEEEEeecCC---CcchH-HHHHHHHHHcCCcceeeeEEEEecCCCCCCccccCCchhhhHHHHh--ccCCCEEEeC
Q 007533 294 EPVRIAMVGKYTG---LSDAY-LSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKL--LKGADGILVP 367 (599)
Q Consensus 294 ~~v~IaiVGkY~~---l~DaY-~SIi~AL~haG~~~~v~v~i~wi~s~~le~~~~~~~p~~y~~a~~~--L~~~DGIlVP 367 (599)
++.+||++=.... +.+.| ..+++.++.+.. ...+.+.+.+.++-+. . ....+. -.++||||+.
T Consensus 67 ~s~~Igvi~~~~~~~~~~~~~~~~~~~gi~~~a~--g~~~~~~~~~~~~~~~------~---~~~~~~l~~~~vdGiIi~ 135 (366)
T 3h5t_A 67 RAGAIGVLLTEDLTYAFEDMASVDFLAGVAQAAG--DTQLTLIPASPASSVD------H---VSAQQLVNNAAVDGVVIY 135 (366)
T ss_dssp -CCEEEEEESSCTTHHHHSHHHHHHHHHHHHHSS--SCEEEEEECCCCTTCC------H---HHHHHHHHTCCCSCEEEE
T ss_pred CCCEEEEEecCCccccccCHHHHHHHHHHHHHHh--hCCEEEEEcCCCccHH------H---HHHHHHHHhCCCCEEEEe
Confidence 3467998832210 23343 368888887755 4445555554322110 0 111222 2589999998
Q ss_pred CCCCCCchhHHHHHHHHHHHcCCCEEEE
Q 007533 368 GGFGNRGVQGKILAAKYAREHRIPYLGI 395 (599)
Q Consensus 368 GGfG~rg~eg~i~aik~are~~iP~LGI 395 (599)
+..... ..++.+.+.++|+.-+
T Consensus 136 ~~~~~~------~~~~~l~~~~iPvV~i 157 (366)
T 3h5t_A 136 SVAKGD------PHIDAIRARGLPAVIA 157 (366)
T ss_dssp SCCTTC------HHHHHHHHHTCCEEEE
T ss_pred cCCCCh------HHHHHHHHCCCCEEEE
Confidence 642211 2345566678887644
No 500
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=21.52 E-value=97 Score=25.05 Aligned_cols=34 Identities=29% Similarity=0.362 Sum_probs=23.4
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCC-CeeEEeeecc
Q 007533 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACG-LRVTCIKIDP 41 (599)
Q Consensus 1 ~k~i~vtggv~s~~gkgi~~~s~g~ll~~~g-~~v~~~k~dp 41 (599)
+|-|+|+|+ .++|. ++...|..+| ++|...-.+|
T Consensus 5 ~~~v~I~G~--G~iG~-----~~~~~l~~~g~~~v~~~~r~~ 39 (118)
T 3ic5_A 5 RWNICVVGA--GKIGQ-----MIAALLKTSSNYSVTVADHDL 39 (118)
T ss_dssp CEEEEEECC--SHHHH-----HHHHHHHHCSSEEEEEEESCH
T ss_pred cCeEEEECC--CHHHH-----HHHHHHHhCCCceEEEEeCCH
Confidence 356888886 55554 5566778889 8888765543
Done!