Query 007536
Match_columns 599
No_of_seqs 518 out of 3890
Neff 8.4
Searched_HMMs 46136
Date Thu Mar 28 11:56:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007536.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/007536hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 TIGR02765 crypto_DASH cryptoch 100.0 1.1E-42 2.4E-47 374.9 24.8 252 46-362 2-270 (429)
2 COG0415 PhrB Deoxyribodipyrimi 100.0 7.9E-42 1.7E-46 357.1 21.9 246 45-362 2-257 (461)
3 TIGR03556 photolyase_8HDF deox 100.0 4.2E-41 9.1E-46 364.5 23.6 245 46-360 2-263 (471)
4 TIGR02766 crypt_chrom_pln cryp 100.0 3.2E-39 6.9E-44 351.7 21.6 243 48-357 1-255 (475)
5 TIGR00591 phr2 photolyase PhrI 100.0 7.7E-39 1.7E-43 347.1 23.8 248 45-358 23-279 (454)
6 PRK10674 deoxyribodipyrimidine 100.0 6.2E-39 1.3E-43 347.7 22.7 240 47-358 4-258 (472)
7 PF00875 DNA_photolyase: DNA p 100.0 1.5E-32 3.3E-37 257.5 15.0 155 47-205 1-164 (165)
8 KOG0133 Deoxyribodipyrimidine 99.9 4E-26 8.6E-31 241.2 13.9 244 45-354 5-269 (531)
9 PLN02824 hydrolase, alpha/beta 99.9 1.9E-21 4.2E-26 199.7 22.2 124 405-529 7-137 (294)
10 PRK03592 haloalkane dehalogena 99.9 1.3E-20 2.8E-25 193.6 18.3 124 404-529 5-128 (295)
11 KOG4178 Soluble epoxide hydrol 99.9 8.5E-21 1.8E-25 188.9 15.5 130 401-530 17-149 (322)
12 PRK00870 haloalkane dehalogena 99.8 2.7E-20 5.8E-25 192.0 17.2 124 405-528 18-149 (302)
13 TIGR02240 PHA_depoly_arom poly 99.8 2.5E-20 5.4E-25 189.7 15.6 122 408-530 4-127 (276)
14 PLN02679 hydrolase, alpha/beta 99.8 4.8E-19 1E-23 187.2 22.3 121 409-530 64-192 (360)
15 PLN02578 hydrolase 99.8 6.9E-19 1.5E-23 185.6 22.8 121 408-530 68-188 (354)
16 PRK03204 haloalkane dehalogena 99.8 8.5E-19 1.9E-23 179.4 16.7 122 406-529 14-136 (286)
17 TIGR03056 bchO_mg_che_rel puta 99.8 2.8E-18 6.1E-23 173.7 16.6 123 407-530 7-131 (278)
18 PLN03087 BODYGUARD 1 domain co 99.8 8.2E-18 1.8E-22 181.3 18.4 128 406-533 176-313 (481)
19 PLN03084 alpha/beta hydrolase 99.8 5.3E-18 1.1E-22 179.2 16.5 120 410-530 109-233 (383)
20 PLN02965 Probable pheophorbida 99.8 2.6E-18 5.6E-23 172.8 12.8 101 429-529 5-107 (255)
21 PRK10749 lysophospholipase L2; 99.8 9.8E-18 2.1E-22 175.2 17.2 123 408-530 33-167 (330)
22 PRK06489 hypothetical protein; 99.8 4.3E-18 9.3E-23 180.1 14.1 118 412-529 46-189 (360)
23 TIGR03343 biphenyl_bphD 2-hydr 99.8 1E-17 2.2E-22 170.5 15.8 114 415-529 19-136 (282)
24 PRK10349 carboxylesterase BioH 99.8 6.3E-18 1.4E-22 169.9 13.2 107 418-530 4-110 (256)
25 PRK08775 homoserine O-acetyltr 99.7 3.8E-18 8.2E-23 179.3 11.1 125 405-531 35-175 (343)
26 PLN02211 methyl indole-3-aceta 99.7 1.1E-17 2.5E-22 169.9 13.4 116 413-528 4-121 (273)
27 PLN02385 hydrolase; alpha/beta 99.7 1.7E-17 3.6E-22 174.8 14.5 121 410-530 66-198 (349)
28 PRK10673 acyl-CoA esterase; Pr 99.7 2.6E-17 5.6E-22 164.9 14.6 101 427-529 16-116 (255)
29 PRK11126 2-succinyl-6-hydroxy- 99.7 2.8E-17 6E-22 163.4 14.4 101 427-530 2-103 (242)
30 TIGR03611 RutD pyrimidine util 99.7 3.4E-17 7.4E-22 162.9 13.7 112 418-530 1-116 (257)
31 PHA02857 monoglyceride lipase; 99.7 1E-16 2.2E-21 163.0 15.3 121 410-530 5-133 (276)
32 TIGR02427 protocat_pcaD 3-oxoa 99.7 9.6E-17 2.1E-21 158.4 14.3 112 418-530 2-115 (251)
33 PLN02298 hydrolase, alpha/beta 99.7 9E-17 1.9E-21 167.9 14.8 122 409-530 36-170 (330)
34 TIGR01250 pro_imino_pep_2 prol 99.7 1.6E-16 3.6E-21 160.5 15.6 120 410-529 6-131 (288)
35 KOG4409 Predicted hydrolase/ac 99.7 6.5E-16 1.4E-20 154.4 19.0 126 406-532 65-198 (365)
36 PF12697 Abhydrolase_6: Alpha/ 99.7 1.1E-16 2.3E-21 155.3 12.4 100 430-530 1-102 (228)
37 TIGR01392 homoserO_Ac_trn homo 99.7 1.1E-16 2.3E-21 168.9 12.4 120 412-531 12-164 (351)
38 PRK07581 hypothetical protein; 99.7 5.3E-17 1.1E-21 170.3 9.8 119 412-530 22-160 (339)
39 TIGR01249 pro_imino_pep_1 prol 99.7 4.8E-16 1E-20 160.7 13.3 120 410-530 8-131 (306)
40 PRK00175 metX homoserine O-ace 99.7 3.6E-16 7.7E-21 166.4 12.4 121 411-531 28-184 (379)
41 COG2267 PldB Lysophospholipase 99.7 1.3E-15 2.8E-20 156.0 15.2 125 408-532 12-145 (298)
42 PLN02894 hydrolase, alpha/beta 99.6 3.2E-15 6.9E-20 160.1 17.5 106 426-532 104-214 (402)
43 PRK14875 acetoin dehydrogenase 99.6 2.3E-15 4.9E-20 159.6 15.5 120 410-530 113-233 (371)
44 TIGR03695 menH_SHCHC 2-succiny 99.6 1.6E-15 3.4E-20 149.3 13.3 103 427-530 1-106 (251)
45 TIGR03101 hydr2_PEP hydrolase, 99.6 5E-15 1.1E-19 148.5 16.0 103 427-529 25-134 (266)
46 TIGR01738 bioH putative pimelo 99.6 2E-15 4.4E-20 148.5 11.2 98 427-530 4-101 (245)
47 PRK05855 short chain dehydroge 99.6 1.3E-14 2.8E-19 163.1 15.5 119 408-527 5-129 (582)
48 PLN02652 hydrolase; alpha/beta 99.6 3E-14 6.4E-19 151.7 15.4 119 411-530 116-246 (395)
49 KOG1455 Lysophospholipase [Lip 99.5 5.6E-14 1.2E-18 138.2 13.8 126 410-535 32-170 (313)
50 PLN02980 2-oxoglutarate decarb 99.5 6.6E-14 1.4E-18 172.2 17.3 112 418-530 1360-1481(1655)
51 KOG1454 Predicted hydrolase/ac 99.5 4.4E-14 9.5E-19 146.3 12.4 107 426-532 57-169 (326)
52 PLN02511 hydrolase 99.5 2E-13 4.4E-18 145.6 13.2 104 426-529 99-210 (388)
53 KOG2984 Predicted hydrolase [G 99.5 7.5E-14 1.6E-18 128.4 7.1 189 406-598 21-221 (277)
54 TIGR03230 lipo_lipase lipoprot 99.5 5.3E-13 1.2E-17 141.6 14.5 108 423-530 37-155 (442)
55 KOG2564 Predicted acetyltransf 99.5 3.4E-13 7.3E-18 130.2 11.4 102 426-528 73-181 (343)
56 TIGR01607 PST-A Plasmodium sub 99.5 3.7E-13 8E-18 140.6 12.5 116 413-528 5-184 (332)
57 COG1647 Esterase/lipase [Gener 99.4 4E-13 8.7E-18 126.1 10.5 103 427-531 15-120 (243)
58 TIGR03100 hydr1_PEP hydrolase, 99.4 3.5E-12 7.5E-17 129.7 16.6 101 426-529 25-134 (274)
59 cd00707 Pancreat_lipase_like P 99.4 4.3E-13 9.2E-18 136.1 9.3 117 415-531 24-149 (275)
60 PRK05077 frsA fermentation/res 99.4 3.7E-12 8E-17 136.7 16.2 103 427-529 194-300 (414)
61 PRK13604 luxD acyl transferase 99.4 4.7E-12 1E-16 128.1 14.3 116 413-530 17-142 (307)
62 PRK11071 esterase YqiA; Provis 99.4 2.7E-12 5.8E-17 123.1 11.9 89 428-530 2-94 (190)
63 COG0596 MhpC Predicted hydrola 99.3 1.2E-11 2.5E-16 121.5 14.4 116 413-530 7-124 (282)
64 PRK10985 putative hydrolase; P 99.3 1.1E-11 2.5E-16 129.1 14.9 103 427-529 58-168 (324)
65 PRK06765 homoserine O-acetyltr 99.3 4.8E-12 1E-16 134.3 12.2 121 413-533 38-200 (389)
66 PRK10566 esterase; Provisional 99.3 1.9E-11 4.2E-16 122.1 14.9 109 418-526 15-139 (249)
67 PF06342 DUF1057: Alpha/beta h 99.3 9.4E-11 2E-15 114.9 16.5 112 418-531 23-139 (297)
68 PF12695 Abhydrolase_5: Alpha/ 99.3 3.4E-11 7.3E-16 109.5 11.8 92 429-527 1-93 (145)
69 TIGR03502 lipase_Pla1_cef extr 99.3 4.1E-11 8.8E-16 134.7 14.7 126 405-530 417-602 (792)
70 TIGR01836 PHA_synth_III_C poly 99.3 2E-11 4.4E-16 128.6 11.7 117 412-531 44-173 (350)
71 PLN00021 chlorophyllase 99.3 2.7E-11 5.9E-16 124.8 11.7 104 426-529 51-166 (313)
72 PLN02872 triacylglycerol lipas 99.3 1.2E-11 2.6E-16 131.4 9.2 123 408-531 47-199 (395)
73 KOG2382 Predicted alpha/beta h 99.2 3.8E-11 8.3E-16 120.3 11.0 104 426-530 51-160 (315)
74 TIGR01838 PHA_synth_I poly(R)- 99.2 9.5E-11 2.1E-15 128.1 11.6 105 427-531 188-304 (532)
75 PF00561 Abhydrolase_1: alpha/ 99.2 5.7E-11 1.2E-15 116.2 8.8 74 455-528 1-78 (230)
76 TIGR01840 esterase_phb esteras 99.1 3.9E-10 8.6E-15 110.1 13.0 104 426-529 12-130 (212)
77 TIGR02821 fghA_ester_D S-formy 99.1 9.9E-10 2.1E-14 111.8 15.2 118 413-530 22-174 (275)
78 TIGR00976 /NonD putative hydro 99.1 2.5E-10 5.5E-15 127.5 10.6 116 414-530 5-133 (550)
79 PF12146 Hydrolase_4: Putative 99.1 4.8E-10 1E-14 90.9 9.3 74 415-488 1-78 (79)
80 PF03441 FAD_binding_7: FAD bi 99.1 5.9E-11 1.3E-15 120.3 4.8 59 292-361 1-59 (277)
81 PRK07868 acyl-CoA synthetase; 99.1 7E-10 1.5E-14 132.2 13.1 102 426-530 66-178 (994)
82 PLN02442 S-formylglutathione h 99.0 3.1E-09 6.6E-14 108.6 13.7 104 427-530 47-179 (283)
83 COG2021 MET2 Homoserine acetyl 99.0 1.3E-09 2.9E-14 110.7 10.3 123 412-534 32-187 (368)
84 KOG2565 Predicted hydrolases o 99.0 2.6E-09 5.6E-14 107.3 10.4 117 412-528 130-263 (469)
85 PRK11460 putative hydrolase; P 98.9 8.1E-09 1.8E-13 102.3 12.2 103 426-528 15-137 (232)
86 PF00975 Thioesterase: Thioest 98.9 9E-09 1.9E-13 101.4 12.4 100 428-529 1-104 (229)
87 PF07819 PGAP1: PGAP1-like pro 98.9 1.4E-08 3.1E-13 99.8 12.6 105 426-533 3-127 (225)
88 KOG4391 Predicted alpha/beta h 98.9 3.4E-09 7.5E-14 99.0 7.0 122 409-530 58-185 (300)
89 KOG1552 Predicted alpha/beta h 98.9 2.1E-08 4.5E-13 97.4 12.2 100 427-528 60-162 (258)
90 KOG2931 Differentiation-relate 98.9 1.6E-07 3.5E-12 92.2 18.0 169 410-593 26-213 (326)
91 PF03096 Ndr: Ndr family; Int 98.8 1.9E-07 4.1E-12 93.0 15.8 120 410-530 3-135 (283)
92 PRK10162 acetyl esterase; Prov 98.8 1.1E-07 2.3E-12 99.0 14.5 104 427-530 81-196 (318)
93 PLN02733 phosphatidylcholine-s 98.7 7E-08 1.5E-12 103.5 11.5 96 437-533 104-205 (440)
94 PF10230 DUF2305: Uncharacteri 98.7 4.3E-07 9.3E-12 91.7 16.7 104 427-530 2-123 (266)
95 PF06500 DUF1100: Alpha/beta h 98.7 1E-07 2.2E-12 99.7 11.8 124 406-529 165-296 (411)
96 PF12740 Chlorophyllase2: Chlo 98.7 9E-08 2E-12 94.4 10.6 113 418-530 8-132 (259)
97 COG0429 Predicted hydrolase of 98.6 1.1E-06 2.5E-11 88.3 15.3 102 427-528 75-184 (345)
98 PRK10252 entF enterobactin syn 98.6 2.1E-07 4.5E-12 114.9 12.3 101 426-529 1067-1171(1296)
99 KOG1838 Alpha/beta hydrolase [ 98.6 1.7E-06 3.8E-11 90.0 16.8 102 426-527 124-233 (409)
100 COG3319 Thioesterase domains o 98.5 7.9E-07 1.7E-11 88.3 11.7 100 428-530 1-104 (257)
101 KOG4667 Predicted esterase [Li 98.5 6.9E-07 1.5E-11 83.9 10.4 103 426-529 32-139 (269)
102 PF01674 Lipase_2: Lipase (cla 98.5 1.3E-07 2.9E-12 91.8 5.8 100 428-528 2-122 (219)
103 PF06821 Ser_hydrolase: Serine 98.5 4.5E-07 9.7E-12 85.2 8.5 89 430-530 1-92 (171)
104 TIGR01839 PHA_synth_II poly(R) 98.5 7.8E-07 1.7E-11 96.7 11.4 103 427-532 215-331 (560)
105 COG3208 GrsT Predicted thioest 98.5 8.9E-07 1.9E-11 85.6 10.3 103 427-530 7-113 (244)
106 PF00151 Lipase: Lipase; Inte 98.4 1.5E-07 3.3E-12 97.6 4.3 107 426-532 70-190 (331)
107 PF07224 Chlorophyllase: Chlor 98.4 6.6E-07 1.4E-11 86.6 8.2 104 427-530 46-158 (307)
108 PF12715 Abhydrolase_7: Abhydr 98.4 1.9E-05 4.1E-10 81.6 19.1 100 427-527 115-258 (390)
109 COG1506 DAP2 Dipeptidyl aminop 98.4 1.8E-06 3.9E-11 97.8 12.7 119 408-528 368-506 (620)
110 PF02230 Abhydrolase_2: Phosph 98.4 8.2E-07 1.8E-11 86.9 8.6 105 426-530 13-141 (216)
111 PF10503 Esterase_phd: Esteras 98.4 2.9E-06 6.4E-11 82.6 11.9 104 427-530 16-133 (220)
112 KOG1553 Predicted alpha/beta h 98.3 4.5E-06 9.7E-11 83.4 11.6 100 427-529 243-345 (517)
113 PF05728 UPF0227: Uncharacteri 98.3 3.7E-06 8.1E-11 79.9 10.5 88 430-531 2-93 (187)
114 COG4757 Predicted alpha/beta h 98.3 2.3E-06 4.9E-11 81.4 8.7 116 413-530 13-139 (281)
115 PF01738 DLH: Dienelactone hyd 98.3 3.9E-06 8.6E-11 82.1 10.3 101 426-527 13-130 (218)
116 COG0412 Dienelactone hydrolase 98.3 1E-05 2.3E-10 80.1 12.7 102 428-530 28-147 (236)
117 PF02129 Peptidase_S15: X-Pro 98.2 3.2E-06 7E-11 85.8 8.6 117 414-531 1-138 (272)
118 COG2945 Predicted hydrolase of 98.2 1.3E-05 2.9E-10 74.3 11.6 103 427-530 28-138 (210)
119 COG0400 Predicted esterase [Ge 98.2 5.3E-06 1.1E-10 80.0 9.0 105 427-532 18-137 (207)
120 PF00326 Peptidase_S9: Prolyl 98.2 3E-06 6.4E-11 82.6 7.4 89 443-531 3-101 (213)
121 COG3571 Predicted hydrolase of 98.2 2E-05 4.3E-10 70.8 11.4 103 428-530 15-125 (213)
122 PF05990 DUF900: Alpha/beta hy 98.2 1E-05 2.2E-10 80.0 10.0 103 426-528 17-136 (233)
123 PF07859 Abhydrolase_3: alpha/ 98.2 3.8E-06 8.3E-11 81.6 6.8 98 430-530 1-111 (211)
124 PF02273 Acyl_transf_2: Acyl t 98.1 2.7E-05 5.8E-10 74.9 11.9 113 414-528 11-133 (294)
125 COG3509 LpqC Poly(3-hydroxybut 98.1 2.2E-05 4.7E-10 77.9 11.4 121 409-529 38-179 (312)
126 PF05448 AXE1: Acetyl xylan es 98.1 2.8E-05 6.2E-10 80.5 12.8 122 407-530 58-210 (320)
127 TIGR01849 PHB_depoly_PhaZ poly 98.1 2.6E-05 5.7E-10 82.5 12.4 102 428-531 103-210 (406)
128 smart00824 PKS_TE Thioesterase 98.1 3.1E-05 6.6E-10 74.3 12.1 95 432-529 2-102 (212)
129 COG1075 LipA Predicted acetylt 98.1 9.5E-06 2.1E-10 84.8 8.2 103 427-531 59-166 (336)
130 PF06028 DUF915: Alpha/beta hy 98.1 1E-05 2.2E-10 80.6 7.8 106 427-532 11-146 (255)
131 KOG2624 Triglyceride lipase-ch 98.1 1.2E-05 2.6E-10 84.8 8.6 124 408-531 51-201 (403)
132 PF03403 PAF-AH_p_II: Platelet 98.1 1.6E-05 3.4E-10 84.3 9.5 105 427-532 100-265 (379)
133 PF05057 DUF676: Putative seri 98.0 1.1E-05 2.4E-10 79.0 7.5 86 427-513 4-97 (217)
134 PRK10115 protease 2; Provision 98.0 6.5E-05 1.4E-09 86.0 13.0 120 411-530 422-560 (686)
135 COG3545 Predicted esterase of 97.9 7E-05 1.5E-09 68.8 9.8 92 428-530 3-95 (181)
136 COG3458 Acetyl esterase (deace 97.9 2.4E-05 5.3E-10 76.3 6.2 123 406-530 57-211 (321)
137 PTZ00472 serine carboxypeptida 97.8 0.00015 3.2E-09 79.1 12.7 121 408-529 49-216 (462)
138 PF05677 DUF818: Chlamydia CHL 97.8 0.00042 9.1E-09 70.4 14.3 103 410-515 116-236 (365)
139 PRK04940 hypothetical protein; 97.8 0.00015 3.2E-09 67.9 9.3 86 430-531 2-94 (180)
140 COG0657 Aes Esterase/lipase [L 97.7 0.00023 5E-09 73.7 11.7 102 427-531 79-193 (312)
141 PF06057 VirJ: Bacterial virul 97.7 9.9E-05 2.1E-09 69.3 7.7 97 429-530 4-108 (192)
142 KOG3847 Phospholipase A2 (plat 97.7 3.9E-05 8.5E-10 76.1 4.9 101 427-528 118-274 (399)
143 COG4099 Predicted peptidase [G 97.7 0.00017 3.6E-09 71.3 8.9 111 415-530 171-305 (387)
144 KOG4627 Kynurenine formamidase 97.7 9.1E-05 2E-09 69.4 6.6 99 427-528 67-171 (270)
145 COG4188 Predicted dienelactone 97.7 0.00011 2.5E-09 75.4 7.9 90 427-516 71-181 (365)
146 PRK05371 x-prolyl-dipeptidyl a 97.6 0.00024 5.3E-09 82.0 10.9 82 446-528 271-372 (767)
147 PF00756 Esterase: Putative es 97.6 0.00013 2.9E-09 72.8 7.7 102 427-528 24-149 (251)
148 PF08538 DUF1749: Protein of u 97.6 0.00058 1.3E-08 69.0 11.9 110 414-530 19-149 (303)
149 COG4782 Uncharacterized protei 97.5 0.0006 1.3E-08 69.7 9.9 103 426-528 115-233 (377)
150 COG4814 Uncharacterized protei 97.5 0.0006 1.3E-08 66.1 9.1 103 428-530 46-177 (288)
151 COG3243 PhaC Poly(3-hydroxyalk 97.5 0.0002 4.2E-09 74.5 6.1 104 427-530 107-218 (445)
152 COG3046 Uncharacterized protei 97.4 0.0087 1.9E-07 61.7 17.6 258 45-358 2-284 (505)
153 KOG3975 Uncharacterized conser 97.4 0.0032 7E-08 61.0 12.8 103 426-528 28-146 (301)
154 KOG3724 Negative regulator of 97.4 0.0013 2.8E-08 72.9 11.1 101 427-530 89-221 (973)
155 PRK10439 enterobactin/ferric e 97.3 0.0012 2.6E-08 70.9 10.8 103 427-529 209-323 (411)
156 KOG2112 Lysophospholipase [Lip 97.3 0.00054 1.2E-08 64.8 7.0 101 428-528 4-127 (206)
157 PF12048 DUF3530: Protein of u 97.3 0.0067 1.5E-07 62.6 15.2 104 427-530 87-230 (310)
158 PF05577 Peptidase_S28: Serine 97.2 0.0026 5.6E-08 69.2 12.3 123 403-532 11-151 (434)
159 PF02450 LCAT: Lecithin:choles 97.2 0.00086 1.9E-08 71.6 7.5 84 442-533 66-164 (389)
160 KOG1515 Arylacetamide deacetyl 97.1 0.0026 5.7E-08 65.9 10.4 102 427-531 90-209 (336)
161 PLN02606 palmitoyl-protein thi 97.1 0.0038 8.2E-08 63.1 11.1 101 427-530 26-133 (306)
162 COG3150 Predicted esterase [Ge 97.1 0.0015 3.3E-08 59.4 7.0 91 430-532 2-94 (191)
163 PF09752 DUF2048: Uncharacteri 97.1 0.0032 6.8E-08 64.8 10.0 103 426-528 91-209 (348)
164 KOG2281 Dipeptidyl aminopeptid 97.1 0.0029 6.3E-08 68.6 9.9 102 426-527 641-760 (867)
165 cd00312 Esterase_lipase Estera 97.1 0.0014 3E-08 72.5 8.0 103 426-530 94-214 (493)
166 KOG2100 Dipeptidyl aminopeptid 97.0 0.0059 1.3E-07 70.5 12.7 122 407-530 499-645 (755)
167 PF03959 FSH1: Serine hydrolas 97.0 0.0037 8.1E-08 60.9 9.3 103 427-530 4-146 (212)
168 COG2936 Predicted acyl esteras 96.9 0.0023 5.1E-08 69.8 7.7 120 411-530 25-160 (563)
169 PF00450 Peptidase_S10: Serine 96.8 0.015 3.2E-07 62.7 13.1 126 403-529 8-181 (415)
170 PLN02633 palmitoyl protein thi 96.8 0.011 2.5E-07 59.7 11.1 101 427-530 25-132 (314)
171 KOG2541 Palmitoyl protein thio 96.4 0.025 5.4E-07 55.6 10.2 97 428-529 24-128 (296)
172 COG2272 PnbA Carboxylesterase 96.3 0.0059 1.3E-07 65.1 5.8 104 427-530 94-218 (491)
173 COG0627 Predicted esterase [Ge 96.3 0.01 2.2E-07 61.1 7.1 38 495-532 153-190 (316)
174 cd00741 Lipase Lipase. Lipase 96.2 0.011 2.5E-07 54.2 6.6 39 492-530 26-68 (153)
175 PF00135 COesterase: Carboxyle 96.2 0.0078 1.7E-07 67.0 6.5 103 427-530 125-246 (535)
176 PF10340 DUF2424: Protein of u 96.1 0.044 9.4E-07 57.4 10.6 105 427-532 122-238 (374)
177 PF02089 Palm_thioest: Palmito 96.1 0.01 2.2E-07 59.5 5.7 103 427-530 5-117 (279)
178 PF11339 DUF3141: Protein of u 95.9 0.045 9.7E-07 58.8 9.7 77 446-528 93-174 (581)
179 KOG3101 Esterase D [General fu 95.9 0.0032 6.9E-08 59.4 1.1 106 427-532 44-179 (283)
180 PF06441 EHN: Epoxide hydrolas 95.7 0.077 1.7E-06 45.9 8.9 70 372-447 39-112 (112)
181 KOG2369 Lecithin:cholesterol a 95.6 0.013 2.8E-07 62.1 4.5 89 441-532 124-228 (473)
182 PLN02517 phosphatidylcholine-s 95.5 0.029 6.2E-07 61.5 6.8 89 442-532 157-266 (642)
183 KOG2183 Prolylcarboxypeptidase 95.4 0.077 1.7E-06 55.3 9.2 99 427-528 80-201 (492)
184 PF01764 Lipase_3: Lipase (cla 95.4 0.03 6.6E-07 50.2 5.7 36 479-514 49-84 (140)
185 PF03583 LIP: Secretory lipase 95.4 0.069 1.5E-06 54.7 8.8 83 445-528 17-112 (290)
186 KOG3967 Uncharacterized conser 95.3 0.12 2.7E-06 49.0 9.5 102 427-528 101-226 (297)
187 PF11187 DUF2974: Protein of u 95.3 0.042 9.1E-07 53.9 6.6 50 481-531 72-125 (224)
188 KOG3043 Predicted hydrolase re 95.0 0.072 1.6E-06 51.2 7.1 118 410-528 22-153 (242)
189 KOG4840 Predicted hydrolases o 95.0 0.084 1.8E-06 50.5 7.4 97 427-530 36-145 (299)
190 KOG2182 Hydrolytic enzymes of 94.6 0.19 4.1E-06 53.8 9.6 106 426-531 85-209 (514)
191 PF11144 DUF2920: Protein of u 94.4 0.28 6E-06 51.7 10.2 36 495-530 185-220 (403)
192 COG2819 Predicted hydrolase of 94.2 0.082 1.8E-06 52.5 5.5 37 494-530 137-173 (264)
193 cd00519 Lipase_3 Lipase (class 94.0 0.11 2.3E-06 51.2 5.9 27 488-514 122-148 (229)
194 PF08840 BAAT_C: BAAT / Acyl-C 93.9 0.14 2.9E-06 50.0 6.5 39 494-533 22-60 (213)
195 PF04244 DPRP: Deoxyribodipyri 93.9 0.52 1.1E-05 46.2 10.5 121 48-178 1-131 (224)
196 PF07082 DUF1350: Protein of u 93.7 0.42 9E-06 47.1 9.2 89 430-527 20-123 (250)
197 COG2382 Fes Enterochelin ester 93.4 0.33 7.1E-06 49.0 8.2 40 494-533 177-216 (299)
198 KOG4372 Predicted alpha/beta h 93.3 0.099 2.1E-06 54.6 4.6 84 427-511 80-167 (405)
199 PF06259 Abhydrolase_8: Alpha/ 93.3 0.23 5E-06 46.7 6.6 55 478-532 88-147 (177)
200 PLN02162 triacylglycerol lipas 93.1 0.22 4.7E-06 53.4 6.8 35 479-513 263-297 (475)
201 PF04301 DUF452: Protein of un 92.9 0.51 1.1E-05 45.7 8.5 83 427-533 11-94 (213)
202 COG3946 VirJ Type IV secretory 92.8 0.31 6.7E-06 50.9 7.1 84 428-516 261-348 (456)
203 PLN00413 triacylglycerol lipas 92.5 0.31 6.7E-06 52.4 7.0 50 479-528 269-326 (479)
204 COG4947 Uncharacterized protei 92.3 0.27 5.8E-06 45.2 5.3 111 416-528 15-135 (227)
205 PLN02209 serine carboxypeptida 92.3 1.6 3.4E-05 47.4 12.2 123 407-529 40-212 (437)
206 PF05576 Peptidase_S37: PS-10 92.2 0.61 1.3E-05 49.1 8.4 109 418-528 54-168 (448)
207 COG2939 Carboxypeptidase C (ca 91.9 0.6 1.3E-05 50.3 8.3 101 427-528 101-235 (498)
208 PLN03016 sinapoylglucose-malat 91.9 2.6 5.6E-05 45.7 13.4 123 406-528 37-209 (433)
209 PLN02454 triacylglycerol lipas 91.9 0.26 5.7E-06 52.2 5.6 32 483-514 215-248 (414)
210 PLN02571 triacylglycerol lipas 91.5 0.28 6.1E-06 52.1 5.2 36 479-514 209-246 (413)
211 PF01083 Cutinase: Cutinase; 90.9 0.44 9.6E-06 45.0 5.5 53 479-531 66-124 (179)
212 PLN02408 phospholipase A1 90.4 0.43 9.3E-06 50.0 5.3 35 480-514 184-220 (365)
213 PF04083 Abhydro_lipase: Parti 89.9 0.57 1.2E-05 36.0 4.3 36 408-443 15-59 (63)
214 PF11288 DUF3089: Protein of u 89.6 0.69 1.5E-05 44.5 5.6 68 447-515 39-116 (207)
215 PLN02934 triacylglycerol lipas 89.2 0.54 1.2E-05 51.0 5.1 35 479-513 306-340 (515)
216 KOG1282 Serine carboxypeptidas 89.0 2.1 4.5E-05 46.4 9.3 126 404-530 42-214 (454)
217 KOG2551 Phospholipase/carboxyh 88.9 3.6 7.7E-05 39.8 9.8 101 427-530 5-148 (230)
218 PLN02324 triacylglycerol lipas 88.6 0.7 1.5E-05 49.1 5.3 34 481-514 200-235 (415)
219 KOG1516 Carboxylesterase and r 88.3 0.77 1.7E-05 51.5 5.9 104 427-530 112-233 (545)
220 PLN02310 triacylglycerol lipas 88.3 1.2 2.5E-05 47.4 6.7 36 479-514 190-229 (405)
221 PLN02802 triacylglycerol lipas 87.6 0.8 1.7E-05 49.7 5.1 35 480-514 314-350 (509)
222 PLN02753 triacylglycerol lipas 86.8 0.94 2E-05 49.4 5.1 34 481-514 294-332 (531)
223 PF05705 DUF829: Eukaryotic pr 86.5 5.2 0.00011 39.5 10.0 102 429-533 1-116 (240)
224 PLN02719 triacylglycerol lipas 85.8 1.1 2.5E-05 48.6 5.1 34 481-514 280-318 (518)
225 KOG1202 Animal-type fatty acid 85.5 3.7 8.1E-05 48.5 9.0 94 426-529 2122-2219(2376)
226 PF05277 DUF726: Protein of un 85.2 1.9 4.1E-05 45.0 6.3 39 492-530 218-261 (345)
227 PLN02847 triacylglycerol lipas 85.2 1.3 2.9E-05 48.9 5.3 26 489-514 246-271 (633)
228 PLN03037 lipase class 3 family 85.0 1.3 2.8E-05 48.3 5.0 35 480-514 300-338 (525)
229 KOG3253 Predicted alpha/beta h 84.8 0.6 1.3E-05 51.0 2.4 94 427-528 176-285 (784)
230 PLN02761 lipase class 3 family 84.5 1.4 3.1E-05 48.0 5.1 34 480-513 274-313 (527)
231 KOG4569 Predicted lipase [Lipi 82.3 1.9 4.1E-05 45.1 4.9 37 478-514 155-191 (336)
232 KOG2237 Predicted serine prote 82.0 1.1 2.3E-05 49.6 2.9 102 427-528 470-583 (712)
233 COG1505 Serine proteases of th 80.1 1.6 3.5E-05 47.9 3.6 117 412-528 401-534 (648)
234 PRK12652 putative monovalent c 79.9 13 0.00028 39.2 10.0 102 60-161 19-144 (357)
235 TIGR00289 conserved hypothetic 78.5 12 0.00026 36.6 8.7 94 60-161 14-112 (222)
236 cd01989 STK_N The N-terminal d 76.7 35 0.00076 30.3 10.9 83 58-140 11-112 (146)
237 PRK09982 universal stress prot 76.6 23 0.00049 31.6 9.6 81 60-140 17-112 (142)
238 KOG2029 Uncharacterized conser 76.6 6.2 0.00014 43.5 6.6 40 494-533 526-576 (697)
239 PF08237 PE-PPE: PE-PPE domain 75.8 15 0.00032 36.1 8.6 75 454-528 2-88 (225)
240 COG1770 PtrB Protease II [Amin 75.6 9.7 0.00021 42.7 7.8 105 427-531 448-564 (682)
241 PF09949 DUF2183: Uncharacteri 74.7 35 0.00076 28.8 9.4 85 440-524 10-97 (100)
242 KOG1551 Uncharacterized conser 73.3 3.4 7.4E-05 40.9 3.3 102 427-528 113-229 (371)
243 PRK15456 universal stress prot 72.2 20 0.00043 31.9 8.1 81 60-140 18-114 (142)
244 COG4553 DepA Poly-beta-hydroxy 70.5 51 0.0011 33.4 10.7 101 427-529 103-209 (415)
245 TIGR00290 MJ0570_dom MJ0570-re 70.0 33 0.00071 33.6 9.4 92 60-161 14-112 (223)
246 cd01994 Alpha_ANH_like_IV This 69.8 27 0.00058 33.4 8.6 93 61-161 14-115 (194)
247 KOG4540 Putative lipase essent 68.8 9.5 0.00021 38.2 5.3 33 484-516 266-298 (425)
248 COG5153 CVT17 Putative lipase 68.8 9.5 0.00021 38.2 5.3 33 484-516 266-298 (425)
249 cd01987 USP_OKCHK USP domain i 68.1 48 0.001 28.4 9.4 78 59-141 12-95 (124)
250 cd01988 Na_H_Antiporter_C The 66.5 69 0.0015 27.5 10.2 82 60-141 13-104 (132)
251 COG1448 TyrB Aspartate/tyrosin 65.7 1.1E+02 0.0024 32.2 12.5 86 428-528 172-264 (396)
252 KOG1283 Serine carboxypeptidas 65.5 13 0.00028 38.0 5.6 99 427-527 31-164 (414)
253 PRK15005 universal stress prot 65.0 65 0.0014 28.4 9.9 80 61-140 19-116 (144)
254 cd00293 USP_Like Usp: Universa 64.4 66 0.0014 27.0 9.6 71 70-140 28-102 (130)
255 PLN02213 sinapoylglucose-malat 64.3 20 0.00042 37.2 7.1 75 455-529 2-96 (319)
256 KOG4388 Hormone-sensitive lipa 62.5 52 0.0011 36.5 9.7 100 428-530 397-509 (880)
257 PRK10116 universal stress prot 61.9 1.1E+02 0.0024 26.8 12.9 84 58-141 15-112 (142)
258 TIGR03712 acc_sec_asp2 accesso 58.8 33 0.00071 37.3 7.5 97 414-515 274-378 (511)
259 PF07519 Tannase: Tannase and 58.4 62 0.0014 35.6 10.0 81 447-529 53-150 (474)
260 cd01714 ETF_beta The electron 58.1 44 0.00095 32.1 7.8 73 446-526 68-146 (202)
261 PF08259 Periviscerokin: Periv 56.3 4.5 9.9E-05 19.5 0.3 7 2-8 4-10 (11)
262 COG2102 Predicted ATPases of P 54.5 71 0.0015 31.1 8.3 92 60-156 14-111 (223)
263 PF01902 ATP_bind_4: ATP-bindi 47.9 24 0.00052 34.4 4.2 91 61-161 15-112 (218)
264 TIGR02765 crypto_DASH cryptoch 47.3 9.7 0.00021 41.3 1.5 59 242-321 208-266 (429)
265 PRK12467 peptide synthase; Pro 46.7 95 0.0021 43.8 10.9 99 427-528 3692-3794(3956)
266 TIGR01490 HAD-SF-IB-hyp1 HAD-s 44.9 46 0.001 31.4 5.7 45 94-138 88-132 (202)
267 COG0415 PhrB Deoxyribodipyrimi 44.3 10 0.00022 41.2 0.9 81 243-356 198-278 (461)
268 PF00582 Usp: Universal stress 44.0 1.3E+02 0.0027 25.5 8.0 32 110-141 81-112 (140)
269 COG0560 SerB Phosphoserine pho 42.1 31 0.00068 33.4 4.0 44 96-139 80-123 (212)
270 PRK14010 potassium-transportin 41.6 1.1E+02 0.0024 35.3 8.7 60 96-160 444-503 (673)
271 PF00702 Hydrolase: haloacid d 41.2 51 0.0011 31.1 5.4 62 95-157 129-192 (215)
272 PRK13398 3-deoxy-7-phosphohept 39.9 3.3E+02 0.0071 27.4 11.0 93 426-525 133-231 (266)
273 PF10087 DUF2325: Uncharacteri 39.4 1.1E+02 0.0025 25.3 6.5 66 98-171 12-82 (97)
274 smart00827 PKS_AT Acyl transfe 38.5 35 0.00075 34.7 3.9 30 484-513 72-101 (298)
275 COG0589 UspA Universal stress 38.5 2.1E+02 0.0045 24.9 8.7 47 94-140 72-122 (154)
276 PRK01122 potassium-transportin 38.2 1.4E+02 0.0029 34.6 8.8 60 96-160 448-507 (679)
277 TIGR03679 arCOG00187 arCOG0018 37.9 2E+02 0.0044 27.9 8.9 92 61-161 12-113 (218)
278 PF13167 GTP-bdg_N: GTP-bindin 37.6 1.7E+02 0.0037 24.4 7.1 53 95-148 7-74 (95)
279 TIGR01488 HAD-SF-IB Haloacid D 37.3 35 0.00076 31.4 3.4 43 96-138 76-118 (177)
280 TIGR03131 malonate_mdcH malona 37.0 39 0.00084 34.4 4.0 30 484-513 66-95 (295)
281 COG1073 Hydrolases of the alph 36.8 35 0.00075 33.8 3.6 36 427-462 49-84 (299)
282 PF00698 Acyl_transf_1: Acyl t 36.2 24 0.00051 36.5 2.2 29 484-512 74-102 (318)
283 cd07225 Pat_PNPLA6_PNPLA7 Pata 35.5 46 0.001 34.3 4.2 62 442-515 3-64 (306)
284 PF03441 FAD_binding_7: FAD bi 34.9 26 0.00056 35.6 2.2 56 244-322 2-57 (277)
285 TIGR01361 DAHP_synth_Bsub phos 34.4 4E+02 0.0087 26.7 10.6 72 426-504 131-206 (260)
286 TIGR01491 HAD-SF-IB-PSPlk HAD- 34.3 63 0.0014 30.3 4.7 44 95-138 82-125 (201)
287 TIGR00128 fabD malonyl CoA-acy 33.7 44 0.00095 33.7 3.7 29 485-513 73-102 (290)
288 cd07198 Patatin Patatin-like p 33.6 56 0.0012 30.2 4.2 31 486-516 18-48 (172)
289 PRK10279 hypothetical protein; 33.3 49 0.0011 34.0 3.9 33 484-516 23-55 (300)
290 TIGR01497 kdpB K+-transporting 33.2 2.1E+02 0.0045 33.1 9.2 44 96-139 449-492 (675)
291 TIGR01544 HAD-SF-IE haloacid d 32.9 68 0.0015 32.5 4.8 37 96-132 124-160 (277)
292 KOG1615 Phosphoserine phosphat 32.7 56 0.0012 31.1 3.8 42 97-138 92-135 (227)
293 KOG2521 Uncharacterized conser 32.7 2.2E+02 0.0048 29.9 8.6 106 427-532 38-155 (350)
294 PF06792 UPF0261: Uncharacteri 32.6 6.6E+02 0.014 27.0 12.6 101 428-528 2-129 (403)
295 KOG2385 Uncharacterized conser 32.5 86 0.0019 34.3 5.6 42 491-532 444-490 (633)
296 cd07207 Pat_ExoU_VipD_like Exo 32.3 59 0.0013 30.6 4.2 30 487-516 20-49 (194)
297 PF12710 HAD: haloacid dehalog 31.5 87 0.0019 29.0 5.2 41 100-140 96-138 (192)
298 TIGR01088 aroQ 3-dehydroquinat 31.3 3.5E+02 0.0075 24.4 8.3 73 97-177 25-104 (141)
299 PRK10490 sensor protein KdpD; 31.1 3E+02 0.0064 33.1 10.6 69 70-143 279-348 (895)
300 TIGR03556 photolyase_8HDF deox 30.6 24 0.00053 38.7 1.3 86 243-356 206-291 (471)
301 cd07227 Pat_Fungal_NTE1 Fungal 30.3 65 0.0014 32.5 4.2 32 484-515 28-59 (269)
302 cd00466 DHQase_II Dehydroquina 30.2 4.1E+02 0.0088 24.0 8.6 75 96-178 24-105 (140)
303 COG1752 RssA Predicted esteras 29.8 64 0.0014 33.1 4.2 33 484-516 29-61 (306)
304 cd07210 Pat_hypo_W_succinogene 29.7 76 0.0016 30.9 4.5 30 487-516 21-50 (221)
305 TIGR00338 serB phosphoserine p 28.9 65 0.0014 30.9 3.9 44 95-138 87-130 (219)
306 PRK11175 universal stress prot 28.9 4.1E+02 0.0089 26.7 10.1 42 99-140 226-270 (305)
307 PRK13015 3-dehydroquinate dehy 28.4 4.5E+02 0.0098 23.9 8.9 72 97-176 27-105 (146)
308 PRK02399 hypothetical protein; 28.3 7.7E+02 0.017 26.5 13.0 101 428-528 4-131 (406)
309 PRK13397 3-deoxy-7-phosphohept 27.6 6E+02 0.013 25.4 10.3 90 426-525 121-219 (250)
310 PF13911 AhpC-TSA_2: AhpC/TSA 27.5 1.2E+02 0.0027 25.7 5.0 41 98-140 2-45 (115)
311 COG2217 ZntA Cation transport 26.7 86 0.0019 36.3 4.8 59 97-160 541-599 (713)
312 COG1225 Bcp Peroxiredoxin [Pos 26.6 4.4E+02 0.0095 24.3 8.5 66 70-140 30-96 (157)
313 TIGR01525 ATPase-IB_hvy heavy 26.1 1.1E+02 0.0024 34.3 5.6 46 94-139 385-431 (556)
314 PRK10517 magnesium-transportin 26.0 2.8E+02 0.006 33.4 9.0 39 95-133 552-590 (902)
315 PRK11613 folP dihydropteroate 26.0 3.6E+02 0.0078 27.4 8.6 56 443-506 165-223 (282)
316 TIGR00521 coaBC_dfp phosphopan 26.0 4.3E+02 0.0092 28.3 9.6 95 428-528 113-234 (390)
317 cd07209 Pat_hypo_Ecoli_Z1214_l 25.8 86 0.0019 30.3 4.1 31 486-516 18-48 (215)
318 COG3933 Transcriptional antite 25.7 3.4E+02 0.0075 29.4 8.6 76 427-513 109-184 (470)
319 TIGR02764 spore_ybaN_pdaB poly 25.7 62 0.0013 30.5 3.0 33 429-461 153-188 (191)
320 cd04823 ALAD_PBGS_aspartate_ri 25.6 4.1E+02 0.0089 27.4 8.8 67 52-118 1-76 (320)
321 cd00384 ALAD_PBGS Porphobilino 24.8 4E+02 0.0086 27.4 8.5 64 56-119 2-74 (314)
322 TIGR01512 ATPase-IB2_Cd heavy 24.5 1.2E+02 0.0027 33.8 5.5 47 94-140 363-410 (536)
323 cd07228 Pat_NTE_like_bacteria 24.5 95 0.0021 28.8 4.0 29 488-516 22-50 (175)
324 cd07211 Pat_PNPLA8 Patatin-lik 24.4 1.6E+02 0.0035 30.2 6.0 17 497-513 44-60 (308)
325 PF00578 AhpC-TSA: AhpC/TSA fa 24.3 2.2E+02 0.0048 24.0 6.1 65 70-139 25-90 (124)
326 PRK05579 bifunctional phosphop 24.0 4.4E+02 0.0095 28.3 9.3 96 427-528 116-237 (399)
327 COG2830 Uncharacterized protei 23.9 62 0.0013 29.8 2.4 82 428-533 12-94 (214)
328 cd01427 HAD_like Haloacid deha 23.8 1.2E+02 0.0026 25.6 4.4 40 93-132 24-63 (139)
329 PRK11175 universal stress prot 23.7 5.8E+02 0.012 25.6 10.0 85 57-141 14-117 (305)
330 PRK14719 bifunctional RNAse/5- 23.5 1.8E+02 0.0038 30.8 6.1 58 104-161 37-96 (360)
331 TIGR00591 phr2 photolyase PhrI 23.1 44 0.00095 36.5 1.6 56 240-303 221-276 (454)
332 PLN02954 phosphoserine phospha 23.0 1E+02 0.0022 29.6 4.1 44 94-137 85-130 (224)
333 COG0218 Predicted GTPase [Gene 22.6 96 0.0021 29.7 3.5 15 457-471 72-86 (200)
334 PF03610 EIIA-man: PTS system 22.5 4.8E+02 0.01 22.1 8.0 73 429-513 2-76 (116)
335 TIGR03333 salvage_mtnX 2-hydro 22.4 1.3E+02 0.0029 28.8 4.7 37 94-130 71-107 (214)
336 TIGR02816 pfaB_fam PfaB family 22.3 89 0.0019 34.9 3.7 32 484-515 254-286 (538)
337 COG1073 Hydrolases of the alph 22.0 7.4 0.00016 38.8 -4.5 101 427-527 88-197 (299)
338 PRK09484 3-deoxy-D-manno-octul 22.0 2.2E+02 0.0048 26.6 6.0 56 96-161 55-110 (183)
339 PRK13384 delta-aminolevulinic 21.8 1.9E+02 0.0041 29.7 5.6 68 52-119 8-84 (322)
340 COG0529 CysC Adenylylsulfate k 21.7 2.1E+02 0.0045 27.1 5.4 55 426-482 21-79 (197)
341 PRK10674 deoxyribodipyrimidine 21.5 44 0.00095 36.8 1.2 56 243-321 203-258 (472)
342 TIGR02884 spore_pdaA delta-lac 21.4 1.1E+02 0.0023 29.9 3.8 34 428-461 187-221 (224)
343 TIGR02873 spore_ylxY probable 21.4 1.1E+02 0.0024 30.8 4.0 34 428-461 231-264 (268)
344 PRK15122 magnesium-transportin 21.3 3.4E+02 0.0074 32.6 8.6 38 96-133 553-590 (903)
345 PF09994 DUF2235: Uncharacteri 21.3 4.5E+02 0.0099 26.5 8.5 22 493-514 91-112 (277)
346 PF08218 Citrate_ly_lig: Citra 21.1 3.3E+02 0.0071 25.7 6.5 103 64-170 20-143 (182)
347 PRK15118 universal stress glob 20.9 5.6E+02 0.012 22.2 12.6 41 100-140 69-112 (144)
348 TIGR02137 HSK-PSP phosphoserin 20.7 96 0.0021 29.8 3.2 44 94-138 69-112 (203)
349 cd07205 Pat_PNPLA6_PNPLA7_NTE1 20.5 1.5E+02 0.0032 27.4 4.4 28 488-515 22-49 (175)
350 PF05822 UMPH-1: Pyrimidine 5' 20.4 97 0.0021 30.8 3.2 38 94-131 91-128 (246)
351 COG1139 Uncharacterized conser 20.3 3.2E+02 0.007 29.4 7.0 62 96-161 65-128 (459)
352 cd06279 PBP1_LacI_like_3 Ligan 20.2 5.4E+02 0.012 25.3 8.8 71 92-172 17-87 (283)
353 cd07230 Pat_TGL4-5_like Triacy 20.0 90 0.0019 33.8 3.1 29 491-519 98-126 (421)
354 PF11111 CENP-M: Centromere pr 20.0 5.2E+02 0.011 24.3 7.6 79 74-157 68-153 (176)
No 1
>TIGR02765 crypto_DASH cryptochrome, DASH family. Photolyases and cryptochromes are related flavoproteins. Photolyases harness the energy of blue light to repair DNA damage by removing pyrimidine dimers. Cryptochromes do not repair DNA and are presumed to act instead in some other (possibly unknown) process such as entraining circadian rhythms. This model describes the cryptochrome DASH subfamily, one of at least five major subfamilies, which is found in plants, animals, marine bacteria, etc. Members of this family bind both folate and FAD. They may show weak photolyase activity in vitro but have not been shown to affect DNA repair in vivo. Rather, DASH family cryptochromes have been shown to bind RNA (Vibrio cholerae VC1814), or DNA, and seem likely to act in light-responsive regulatory processes.
Probab=100.00 E-value=1.1e-42 Score=374.90 Aligned_cols=252 Identities=31% Similarity=0.534 Sum_probs=199.2
Q ss_pred cEEEEEcCCCCCCCCHHHHHHHhC-CCeEEEEEeCCccccc--------CCHhHHHHHHHHHHHHHHHHHhcCCcEEEEE
Q 007536 46 SAVIWFKQDLRVDDHLGLVAASKY-QAVVPLYVFDHRILSR--------YSNEMLELVIFALEDLRKSLKEQGSDLMIRF 116 (599)
Q Consensus 46 ~~l~WfrrDLRl~DN~aL~~A~~~-~~v~~vfi~d~~~~~~--------~~~~r~~Fl~~sL~~L~~~L~~~g~~L~v~~ 116 (599)
.+|||||||||++||+||.+|++. .+|+||||+||.++.. .+++|++||+|||.+|+++|+++|++|+++.
T Consensus 2 ~~l~WfRrDLRl~DN~aL~~A~~~~~~vl~vfi~dp~~~~~~~~~~~~~~~~~r~~Fl~esL~~L~~~L~~~g~~L~v~~ 81 (429)
T TIGR02765 2 VVLYWFRNDLRVHDNPALYKASSSSDTLIPLYCFDPRQFKLTHFFGFPKTGPARGKFLLESLKDLRTSLRKLGSDLLVRS 81 (429)
T ss_pred eEEEEeCCCCccccHHHHHHHHhcCCeEEEEEEECchHhccccccccCCCCHHHHHHHHHHHHHHHHHHHHcCCCeEEEe
Confidence 579999999999999999999987 6899999999987652 5899999999999999999999999999999
Q ss_pred cCHHHHHHHHHHHhCCcEEEEccccChhHHHHHHHHHHHHHhcccCCCCceeEeeCcccccCCCC----CCCCcchhhHH
Q 007536 117 GRVENVIRELVEEVKATSVFAEEEVEYHLRQMMAIVDETLAKVSLVDGKPKICLWQTPFYDIKNL----NDLPVSHNEFR 192 (599)
Q Consensus 117 g~~~~~l~~l~~~~~~~~v~~~~~~~~~~~~~d~~v~~~l~~~gi~~~~~~~~~~~~~l~~~~~~----~~~p~~f~~f~ 192 (599)
|++.++|++|+++++|++||+|++|+++++++|++|++.|++.|| .++.+++++|++|+++ +++|++|++|+
T Consensus 82 G~~~~vl~~L~~~~~~~~V~~~~~~~~~~~~rd~~v~~~l~~~~i----~~~~~~~~~l~~p~~v~~~~~~~~~~ft~f~ 157 (429)
T TIGR02765 82 GKPEDVLPELIKELGVRTVFLHQEVGSEEKSVERLLQQALARLGI----HVEQHWGSTLYHEDDLPFDLEDLPDVFTQFR 157 (429)
T ss_pred CCHHHHHHHHHHHhCCCEEEEeccCCHHHHHHHHHHHHHHHhcCc----eEEEecCCEeECHHhcCCCCCCCCCCchHHH
Confidence 999999999999999999999999999999999999999998876 8999999999998875 67888999999
Q ss_pred hcccc---CCCCCCCC-CcCCCCCCCCCCCCCChhhhhhhhccCcchhhhhhhhhcccchhhHHHHHhhhcccccccCCC
Q 007536 193 KLQRP---LTSPILPP-TLAGAKLEADWGPLPTFDELKEFVNENPWKLEESWTLINNMSAETILTDKLSKLGKRSKRNLN 268 (599)
Q Consensus 193 k~~~~---~~~p~~~p-~l~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~g~~~a~~~l~~~~~~~~~~~~~~~~ 268 (599)
+++.. ...+++.| .++..+.......+|++++++.
T Consensus 158 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~l~~~~~----------------------------------------- 196 (429)
T TIGR02765 158 KQVEAKCSIRPPLPAPEKLPPLPSVDDPGWIPTLEDLGE----------------------------------------- 196 (429)
T ss_pred HHHHhhCCCCCCCCCcccCCCCcccccccCCCChhhcCC-----------------------------------------
Confidence 98543 22233333 1211110000001122111110
Q ss_pred CCCCCccccCCCccccCCCCccccChHHHHHHHHHHHHhhccCccchHHHHHHhhccccCCCCCCcccccccchhccccc
Q 007536 269 NQHSPRKRLDKSFFVTDKGNTVGGGTNAVLNALQAYLRYLEGTVRDDWQELQEKLRNAESRDGASFATLFGPALCLGIIS 348 (599)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~gGe~~A~~~L~~fl~~~~~~~~~~Y~~~rn~~r~~~~~~~~~~tS~LSpyL~~G~IS 348 (599)
+... ......++|||.+|+++|++|++ ...+..|++.||. .++.++||+|||||+|||||
T Consensus 197 ---------~~~~--~~~~~~~~gGe~~A~~~L~~Fl~---~~~l~~Y~~~R~~------~~~~~~tS~LSpyL~~G~iS 256 (429)
T TIGR02765 197 ---------ESSE--VDRGLPFVGGETAGLARLKEYFW---SKDLKSYKETRNG------MLGPDYSTKFSPWLALGCVS 256 (429)
T ss_pred ---------Cccc--ccccCCcCchHHHHHHHHHHHHh---hccHhhhhhccCc------ccCCCCcCccCHHHhCCccc
Confidence 0000 00011479999999999999984 2468999998764 35678999999999999999
Q ss_pred hhHHHHHHhhhhhh
Q 007536 349 RRGVHYEAIKFEKE 362 (599)
Q Consensus 349 ~R~v~~~v~~~~~~ 362 (599)
||+|++++.+++..
T Consensus 257 ~r~v~~~~~~~~~~ 270 (429)
T TIGR02765 257 PRQIYEELQRYETE 270 (429)
T ss_pred HHHHHHHHHHHHhh
Confidence 99999999876543
No 2
>COG0415 PhrB Deoxyribodipyrimidine photolyase [DNA replication, recombination, and repair]
Probab=100.00 E-value=7.9e-42 Score=357.12 Aligned_cols=246 Identities=26% Similarity=0.404 Sum_probs=204.5
Q ss_pred CcEEEEEcCCCCCCCCHHHHHHHhC-CC-eEEEEEeCCcccccCCHhHHHHHHHHHHHHHHHHHhcCCcEEEEEcCHHHH
Q 007536 45 GSAVIWFKQDLRVDDHLGLVAASKY-QA-VVPLYVFDHRILSRYSNEMLELVIFALEDLRKSLKEQGSDLMIRFGRVENV 122 (599)
Q Consensus 45 ~~~l~WfrrDLRl~DN~aL~~A~~~-~~-v~~vfi~d~~~~~~~~~~r~~Fl~~sL~~L~~~L~~~g~~L~v~~g~~~~~ 122 (599)
+++|||||||||++||+||.+|++. .+ +++|||+||.++...++++.+||.+||++|+++|+++|++|+|..|++.++
T Consensus 2 ~~~l~WfrrDLR~~DN~aL~~A~~~~~~~~~~vfi~~~~~~~~~~~~~~~Fl~~sL~~L~~~L~~~gi~L~v~~~~~~~~ 81 (461)
T COG0415 2 STVLVWFRRDLRLTDNAALAAACQSGQPVIIAVFILDPEQLGHASPRHAAFLLQSLQALQQSLAELGIPLLVREGDPEQV 81 (461)
T ss_pred CeEEEEeccccccCChHHHHHHHhcCCCceEEEEEechhhccccCHHHHHHHHHHHHHHHHHHHHcCCceEEEeCCHHHH
Confidence 5789999999999999999999988 44 568999999998877999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCcEEEEccccChhHHHHHHHHHHHHHhcccCCCCceeEeeCcccccCCC----CCCCCcchhhHHhccccC
Q 007536 123 IRELVEEVKATSVFAEEEVEYHLRQMMAIVDETLAKVSLVDGKPKICLWQTPFYDIKN----LNDLPVSHNEFRKLQRPL 198 (599)
Q Consensus 123 l~~l~~~~~~~~v~~~~~~~~~~~~~d~~v~~~l~~~gi~~~~~~~~~~~~~l~~~~~----~~~~p~~f~~f~k~~~~~ 198 (599)
++++++++++++||+|.+|+..++.+|.+++..|.+.|| .++++++++++.|.+ .+++|++||+|++++...
T Consensus 82 l~~~~~~~~~~~v~~n~~~~~~~~~rD~al~~~l~~~gi----~~~~~~d~~l~~p~~~~t~~~~~y~vfT~F~k~~~~~ 157 (461)
T COG0415 82 LPELAKQLAATTVFWNRDYEEWERQRDAALAQPLTEVGI----AVHSFWDALLHEPGEVRTGSGEPYKVFTPFYKAWRDR 157 (461)
T ss_pred HHHHHHHhCcceEEeeeeechhHHHHHHHHHHHHHhcCc----eEEEeccccccCHhhccCCCCCCccccchHHHHHHHh
Confidence 999999999999999999999999999999999999887 888899999999975 488999999999986543
Q ss_pred ---CCCCCCCC-cCCCCCCCCCCCCCChhhhhhhhccCcchhhhhhhhhcccchhhHHHHHhhhcccccccCCCCCCCCc
Q 007536 199 ---TSPILPPT-LAGAKLEADWGPLPTFDELKEFVNENPWKLEESWTLINNMSAETILTDKLSKLGKRSKRNLNNQHSPR 274 (599)
Q Consensus 199 ---~~p~~~p~-l~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~g~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~ 274 (599)
..|.+.|. +..+..... .+....+ | +
T Consensus 158 ~~~~~~~~~p~~~~~~~~~~~---~~~~~~~-------P-----------------------------------~----- 187 (461)
T COG0415 158 LRILRPVPAPDVLDALRDEEP---PPEEISL-------P-----------------------------------D----- 187 (461)
T ss_pred cccCCCCCCcchhcccccccc---CcccccC-------C-----------------------------------c-----
Confidence 34455552 221111000 0010000 0 0
Q ss_pred cccCCCccccCCCCccccChHHHHHHHHHHHHhhccCccchHHHHHHhhccccCCCCCCcccccccchhccccchhHHHH
Q 007536 275 KRLDKSFFVTDKGNTVGGGTNAVLNALQAYLRYLEGTVRDDWQELQEKLRNAESRDGASFATLFGPALCLGIISRRGVHY 354 (599)
Q Consensus 275 ~~~~~~~~~~~~~~~~~gGe~~A~~~L~~fl~~~~~~~~~~Y~~~rn~~r~~~~~~~~~~tS~LSpyL~~G~IS~R~v~~ 354 (599)
+.......|.|||.+|+++|++|++ .++..|++.|| +|+.++||+|||||+||+||||+||+
T Consensus 188 -------~~~~~~~~~~~Ge~aA~~~l~~F~~----~~l~~Y~~~Rd-------~p~~~~TS~LSpyL~~G~IS~r~v~~ 249 (461)
T COG0415 188 -------FSKFDVLLFTGGEKAALARLQDFLA----EGLDDYERTRD-------FPALDGTSRLSPYLAFGVISPREVYA 249 (461)
T ss_pred -------cccccccCCCchHHHHHHHHHHHHH----HHHHHHHHhcC-------CcccccccccCHHHHcCCcCHHHHHH
Confidence 0000112689999999999999996 77999999875 58999999999999999999999999
Q ss_pred HHhhhhhh
Q 007536 355 EAIKFEKE 362 (599)
Q Consensus 355 ~v~~~~~~ 362 (599)
++.+.++.
T Consensus 250 ~~~~~~~~ 257 (461)
T COG0415 250 ALLAAESD 257 (461)
T ss_pred HHHHhhhc
Confidence 99887765
No 3
>TIGR03556 photolyase_8HDF deoxyribodipyrimidine photo-lyase, 8-HDF type. This model describes a narrow clade of cyanobacterial deoxyribodipyrimidine photo-lyase. This group, in contrast to several closely related proteins, uses a chromophore that, in other lineages is modified further to become coenzyme F420. This chromophore is called 8-HDF in most articles on the DNA photolyase and FO in most literature on coenzyme F420.
Probab=100.00 E-value=4.2e-41 Score=364.53 Aligned_cols=245 Identities=24% Similarity=0.361 Sum_probs=197.4
Q ss_pred cEEEEEcCCCCCCCCHHHHHHHhC-CCeEEEEEeCCccccc--CCHhHHHHHHHHHHHHHHHHHhcCCcEEEEEcCHHHH
Q 007536 46 SAVIWFKQDLRVDDHLGLVAASKY-QAVVPLYVFDHRILSR--YSNEMLELVIFALEDLRKSLKEQGSDLMIRFGRVENV 122 (599)
Q Consensus 46 ~~l~WfrrDLRl~DN~aL~~A~~~-~~v~~vfi~d~~~~~~--~~~~r~~Fl~~sL~~L~~~L~~~g~~L~v~~g~~~~~ 122 (599)
.+|||||||||++||+||.+|++. .+|+||||+||.++.. .+.+|++||+|||.+|+++|+++|++|+++.|++.++
T Consensus 2 ~vl~WfRrDLRl~DN~AL~~A~~~~~~vl~vfi~dp~~~~~~~~~~~r~~Fl~esL~~L~~~L~~~G~~L~v~~G~p~~v 81 (471)
T TIGR03556 2 LILFWHRRDLRLSDNIGLAAARQQSAKVVGLFCLDPNILQADDMAPARVAYLIGCLQELQQRYQQAGSQLLILQGDPVQL 81 (471)
T ss_pred CEEEEeCCCCCcchHHHHHHHHhcCCCEEEEEEEchhhhccccCCHHHHHHHHHHHHHHHHHHHHCCCCeEEEECCHHHH
Confidence 489999999999999999999987 6899999999987652 4788999999999999999999999999999999999
Q ss_pred HHHHHHHhCCcEEEEccccChhHHHHHHHHHHHHHhcccCCCCceeEeeCcccccCCCC----CCCCcchhhHHhccccC
Q 007536 123 IRELVEEVKATSVFAEEEVEYHLRQMMAIVDETLAKVSLVDGKPKICLWQTPFYDIKNL----NDLPVSHNEFRKLQRPL 198 (599)
Q Consensus 123 l~~l~~~~~~~~v~~~~~~~~~~~~~d~~v~~~l~~~gi~~~~~~~~~~~~~l~~~~~~----~~~p~~f~~f~k~~~~~ 198 (599)
|++|+++++|++||+|.+|+++++++|++|++.|++.|| .+.++++++|++|.++ +++|++|++|++++...
T Consensus 82 l~~l~~~~~~~~V~~~~~~~~~~~~rd~~v~~~l~~~~i----~~~~~~~~~l~~p~~i~~~~~~~y~~ft~f~k~~~~~ 157 (471)
T TIGR03556 82 IPQLAQQLGAKAVYWNLDVEPYGRKRDRAVAAALKEAGI----AVVTLWDQLLHSPDEILTGSGNPYTVYTPFWKNWSSL 157 (471)
T ss_pred HHHHHHHcCCCEEEEecccCHHHHHHHHHHHHHHHHCCC----EEEEeCCcEEECccccccCCCCCCcchhHHHHHHHhc
Confidence 999999999999999999999999999999999998876 8999999999999875 56899999999985443
Q ss_pred C--CCCCCC-CcCCCCCCCC-------CCCCCChhhhhhhhccCcchhhhhhhhhcccchhhHHHHHhhhcccccccCCC
Q 007536 199 T--SPILPP-TLAGAKLEAD-------WGPLPTFDELKEFVNENPWKLEESWTLINNMSAETILTDKLSKLGKRSKRNLN 268 (599)
Q Consensus 199 ~--~p~~~p-~l~~~~~~~~-------~~~~p~~~~l~~~~~~~~~~~~~~~~~~g~~~a~~~l~~~~~~~~~~~~~~~~ 268 (599)
. .|++.| .++..+.... ...+|+.++++
T Consensus 158 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~------------------------------------------ 195 (471)
T TIGR03556 158 PKPTPVATPTELEGLTEAELEAAAPLGVIALPTAKDLG------------------------------------------ 195 (471)
T ss_pred cccCCCCCccccccCCccccccccccccccCCcccccc------------------------------------------
Confidence 2 234444 2221100000 00001100000
Q ss_pred CCCCCccccCCCccccCCCCccccChHHHHHHHHHHHHhhccCccchHHHHHHhhccccCCCCCCcccccccchhccccc
Q 007536 269 NQHSPRKRLDKSFFVTDKGNTVGGGTNAVLNALQAYLRYLEGTVRDDWQELQEKLRNAESRDGASFATLFGPALCLGIIS 348 (599)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~gGe~~A~~~L~~fl~~~~~~~~~~Y~~~rn~~r~~~~~~~~~~tS~LSpyL~~G~IS 348 (599)
.+.. ... .++|||++|+++|+.|++ +++..|++.|| .|+.++||+|||||+|||||
T Consensus 196 --------~~~~---~~~--~~~gGe~~A~~~L~~f~~----~~l~~Y~~~r~-------~p~~~~tS~LSpyL~~G~iS 251 (471)
T TIGR03556 196 --------FDWD---GDL--ILEPGETAAQARLEEFCD----RAIADYQEQRN-------FPALDGTSQLSPALKFGVIG 251 (471)
T ss_pred --------cccc---ccc--CCCCcHHHHHHHHHHHHH----HHHHHhhhccC-------CCCCCCCCCCChhhcCCccc
Confidence 0000 001 479999999999999995 68999999875 37889999999999999999
Q ss_pred hhHHHHHHhhhh
Q 007536 349 RRGVHYEAIKFE 360 (599)
Q Consensus 349 ~R~v~~~v~~~~ 360 (599)
+|+||+++++..
T Consensus 252 ~r~v~~~~~~~~ 263 (471)
T TIGR03556 252 IRTVWQATQEAH 263 (471)
T ss_pred HHHHHHHHHHHH
Confidence 999999997654
No 4
>TIGR02766 crypt_chrom_pln cryptochrome, plant family. At least five major families of cryptochomes and photolyases share FAD cofactor binding, sequence homology, and the ability to react to short wavelengths of visible light. Photolysases are responsible for light-dependent DNA repair by removal of two types of uv-induced DNA dimerizations. Cryptochromes have other functions, often regulatory and often largely unknown, which may include circadian clock entrainment and control of development. Members of this subfamily are known so far only in plants; they may show some photolyase activity in vitro but appear mostly to be regulatory proteins that respond to blue light.
Probab=100.00 E-value=3.2e-39 Score=351.74 Aligned_cols=243 Identities=18% Similarity=0.198 Sum_probs=190.1
Q ss_pred EEEEcCCCCCCCCHHHHHHHhCCCeEEEEEeCCccccc--CCHhHHHHHHHHHHHHHHHHHhcCCcEEEEE-cCHHHHHH
Q 007536 48 VIWFKQDLRVDDHLGLVAASKYQAVVPLYVFDHRILSR--YSNEMLELVIFALEDLRKSLKEQGSDLMIRF-GRVENVIR 124 (599)
Q Consensus 48 l~WfrrDLRl~DN~aL~~A~~~~~v~~vfi~d~~~~~~--~~~~r~~Fl~~sL~~L~~~L~~~g~~L~v~~-g~~~~~l~ 124 (599)
|+|||||||++||+||.+|++.++|+||||+||.++.. .+.++.+||++||.+|+++|+++|++|+++. |++.++|.
T Consensus 1 l~WFRrDLRl~DN~aL~~A~~~~~vlpvyi~dp~~~~~~~~~~~~~~fl~~sL~~L~~~L~~~G~~L~v~~~g~~~~~l~ 80 (475)
T TIGR02766 1 IVWFRRDLRVEDNPALAAAARAGPVIPVFVWAPEEEGQYYPGRVSRWWLKQSLAHLDQSLRSLGTCLVTIRSTDTVAALL 80 (475)
T ss_pred CEecCCCCCcchHHHHHHHHhCCCEEEEEEechHHhccccccHHHHHHHHHHHHHHHHHHHHcCCceEEEeCCCHHHHHH
Confidence 69999999999999999998767899999999987642 3667788999999999999999999999985 89999999
Q ss_pred HHHHHhCCcEEEEccccChhHHHHHHHHHHHHHhcccCCCCceeEeeCcccccCCCC----CCCCcchhhHHhccccCCC
Q 007536 125 ELVEEVKATSVFAEEEVEYHLRQMMAIVDETLAKVSLVDGKPKICLWQTPFYDIKNL----NDLPVSHNEFRKLQRPLTS 200 (599)
Q Consensus 125 ~l~~~~~~~~v~~~~~~~~~~~~~d~~v~~~l~~~gi~~~~~~~~~~~~~l~~~~~~----~~~p~~f~~f~k~~~~~~~ 200 (599)
+|+++++|+.||+|.+++++++++|++|++.|++.|| .++.+++++|++|+++ +++|++|++|++++.....
T Consensus 81 ~l~~~~~i~~v~~~~~~~~~~~~rd~~v~~~l~~~gi----~~~~~~~~~l~~p~~i~~~~~~~~~~ft~f~~~~~~~~~ 156 (475)
T TIGR02766 81 DCVRSTGATRLFFNHLYDPVSLVRDHRAKEVLTAQGI----SVQSFNADLLYEPWEVYDELGRPFTMFAAFWERCLSMPY 156 (475)
T ss_pred HHHHHcCCCEEEEecccCHHHHHHHHHHHHHHHHcCC----EEEEecCCEEEChhhhcccCCCCCCeecHHHHHHHhccC
Confidence 9999999999999999999999999999999998876 8999999999999864 5789999999998543221
Q ss_pred -C---CCCCC-cCCCCCCCCCCCCCChhhhhhhhccCcchhhhhhhhhcccchhhHHHHHhhhcccccccCCCCCCCCcc
Q 007536 201 -P---ILPPT-LAGAKLEADWGPLPTFDELKEFVNENPWKLEESWTLINNMSAETILTDKLSKLGKRSKRNLNNQHSPRK 275 (599)
Q Consensus 201 -p---~~~p~-l~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~g~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~ 275 (599)
+ .+.|. ++.. ....+..++++..... .+
T Consensus 157 ~~~~~~~~p~~~~~~-----~~~~~~~~~~~~~~~~-------~~----------------------------------- 189 (475)
T TIGR02766 157 DPESPLLPPKKIISG-----DVSKCSADDLGFEDDS-------EK----------------------------------- 189 (475)
T ss_pred CCCCCCCCccccCCC-----ccccCChhhcCCCCcc-------cc-----------------------------------
Confidence 1 22221 1100 0000011111100000 00
Q ss_pred ccCCCccccCCCCccccChHHHHHHHHHHHHhhccCccchHHHHHHhhccccCCCCCCcccccccchhccccchhHHHHH
Q 007536 276 RLDKSFFVTDKGNTVGGGTNAVLNALQAYLRYLEGTVRDDWQELQEKLRNAESRDGASFATLFGPALCLGIISRRGVHYE 355 (599)
Q Consensus 276 ~~~~~~~~~~~~~~~~gGe~~A~~~L~~fl~~~~~~~~~~Y~~~rn~~r~~~~~~~~~~tS~LSpyL~~G~IS~R~v~~~ 355 (599)
..+. .....|+|||++|+++|+.|++ +++..|++.|| .|+.++||+|||||+|||||||+||++
T Consensus 190 -~~~~----~~~~~~~gGe~~A~~~L~~Fl~----~~~~~Y~~~Rd-------~p~~~~tS~LSPyL~~G~ISpR~v~~~ 253 (475)
T TIGR02766 190 -GSNA----LLARAWSPGWSNADKALTEFIN----GPLLEYSKNRK-------KADSATTSLLSPYLHFGEVSVRKVFHL 253 (475)
T ss_pred -cccc----cccccCCCccHHHHHHHHHHHH----HHHHHHhhcCC-------CCCCCCCCCCCcccccCcccHHHHHHH
Confidence 0000 0012489999999999999985 67899999875 367799999999999999999999999
Q ss_pred Hh
Q 007536 356 AI 357 (599)
Q Consensus 356 v~ 357 (599)
++
T Consensus 254 ~~ 255 (475)
T TIGR02766 254 VR 255 (475)
T ss_pred HH
Confidence 96
No 5
>TIGR00591 phr2 photolyase PhrII. All proteins in this family for which functions are known are DNA-photolyases used for the direct repair of UV irradiation induced DNA damage. Some repair 6-4 photoproducts while others repair cyclobutane pyrimidine dimers. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=100.00 E-value=7.7e-39 Score=347.09 Aligned_cols=248 Identities=15% Similarity=0.142 Sum_probs=187.5
Q ss_pred CcEEEEEcCCCCCCCCHHHHHHHh-----CCCeEEEEEeCCcccccCCHhHHHHHHHHHHHHHHHHHhcCCcEEEEEcCH
Q 007536 45 GSAVIWFKQDLRVDDHLGLVAASK-----YQAVVPLYVFDHRILSRYSNEMLELVIFALEDLRKSLKEQGSDLMIRFGRV 119 (599)
Q Consensus 45 ~~~l~WfrrDLRl~DN~aL~~A~~-----~~~v~~vfi~d~~~~~~~~~~r~~Fl~~sL~~L~~~L~~~g~~L~v~~g~~ 119 (599)
+++|||||||||++||+||.+|++ ..+|+||||+||.++. .+.+|++||+|||.+|+++|+++|++|+|+.|++
T Consensus 23 ~~vL~WFRrDLRl~DN~aL~~A~~~a~~~~~~vl~vyi~dp~~~~-~~~~r~~Fl~esL~~L~~~L~~~g~~L~v~~g~~ 101 (454)
T TIGR00591 23 GVVVYWMSRDQRVQDNWALIAAQTLALKKKLPLHVCFCLVDFFLA-ATRRHYFFMLGGLDEVANECERLIIPFHLLDGPP 101 (454)
T ss_pred CeEEEEecCchhccCCHHHHHHHHHHHHcCCCEEEEEEeCCCccc-ccHHHHHHHHHHHHHHHHHHHHcCCceEEeecCh
Confidence 569999999999999999999975 2589999999998876 5889999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCcEEEEccccChhHHHHHHHHHHHHHhcccCCCCceeEeeCcccccCCCC--CCCCcchhhHHhcccc
Q 007536 120 ENVIRELVEEVKATSVFAEEEVEYHLRQMMAIVDETLAKVSLVDGKPKICLWQTPFYDIKNL--NDLPVSHNEFRKLQRP 197 (599)
Q Consensus 120 ~~~l~~l~~~~~~~~v~~~~~~~~~~~~~d~~v~~~l~~~gi~~~~~~~~~~~~~l~~~~~~--~~~p~~f~~f~k~~~~ 197 (599)
.++|++|+++++|++||+|.+++++++++|+.|++.|++ +| .++.+++++|++++.+ ..++++|++|.+....
T Consensus 102 ~~~l~~l~~~~~i~~V~~~~~~~~~~~~rd~~v~~~l~~-~i----~~~~~~~~~l~p~~~~~~~~~y~~ft~~~k~~~~ 176 (454)
T TIGR00591 102 KELLPYFVDLHAAAAVVTDFSPLRQPEQWDEAVGKLLPK-DV----PFQQVDAHNVVPCWAASKKLEYAARTIRGKIRKL 176 (454)
T ss_pred HHHHHHHHHHcCCCEEEEecccCcHHHHHHHHHHHHhcC-CC----cEEEECCceEeeCcccCCceeeeeecHHHHHHHh
Confidence 999999999999999999999999999999999999965 55 8999999999999654 3456677777665221
Q ss_pred CCCCCCC-CCcCCCCCCCCCCCCCChhhhhhhhccCcchhhhhhhhhcccchhhHHHHHhhhcccccccCCCCCCCCccc
Q 007536 198 LTSPILP-PTLAGAKLEADWGPLPTFDELKEFVNENPWKLEESWTLINNMSAETILTDKLSKLGKRSKRNLNNQHSPRKR 276 (599)
Q Consensus 198 ~~~p~~~-p~l~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~g~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 276 (599)
.+..+.. |.....+. .....+... .|.. .++. +.
T Consensus 177 ~~~~~~~~~~~~~~~~--~~~~~~~~~---------------~~~~--------~~~~-~~------------------- 211 (454)
T TIGR00591 177 LPEYLTEFPRVLKHPS--PLDLEAGPV---------------DWDA--------VRDS-LA------------------- 211 (454)
T ss_pred ChhhccccCCCccCCc--ccccccCcC---------------CHHH--------HHHh-cc-------------------
Confidence 1111110 10000000 000000000 0000 0000 00
Q ss_pred cCCCccccCCCCcc-ccChHHHHHHHHHHHHhhccCccchHHHHHHhhccccCCCCCCcccccccchhccccchhHHHHH
Q 007536 277 LDKSFFVTDKGNTV-GGGTNAVLNALQAYLRYLEGTVRDDWQELQEKLRNAESRDGASFATLFGPALCLGIISRRGVHYE 355 (599)
Q Consensus 277 ~~~~~~~~~~~~~~-~gGe~~A~~~L~~fl~~~~~~~~~~Y~~~rn~~r~~~~~~~~~~tS~LSpyL~~G~IS~R~v~~~ 355 (599)
...+ .....| +|||++|+++|+.|++ +++..|++.||. |+.++||+||||||||+||||+|+++
T Consensus 212 ~~~~----~~~~~~~~gGe~aA~~~L~~F~~----~~l~~Y~~~Rn~-------p~~~~tS~LSPyL~~G~IS~R~i~~~ 276 (454)
T TIGR00591 212 VERS----VEEVVWAKPGTTAGLIMLESFIE----KRLCFFRTRRND-------PNNDALSMLSPWLHFGQLSAQRAARA 276 (454)
T ss_pred CcCC----cCCcCCCCCcHHHHHHHHHHHHH----HHHHHHHHhcCC-------cccccccccchHHhcCcccHHHHHHH
Confidence 0000 001136 9999999999999985 789999999864 77899999999999999999999999
Q ss_pred Hhh
Q 007536 356 AIK 358 (599)
Q Consensus 356 v~~ 358 (599)
+.+
T Consensus 277 ~~~ 279 (454)
T TIGR00591 277 VER 279 (454)
T ss_pred HHH
Confidence 855
No 6
>PRK10674 deoxyribodipyrimidine photolyase; Provisional
Probab=100.00 E-value=6.2e-39 Score=347.72 Aligned_cols=240 Identities=15% Similarity=0.194 Sum_probs=188.6
Q ss_pred EEEEEcCCCCCCCCHHHHHHHhC-C-CeEEEEEeCCcccc--cCCHhHHHHHHHHHHHHHHHHHhcCCcEEEEEc----C
Q 007536 47 AVIWFKQDLRVDDHLGLVAASKY-Q-AVVPLYVFDHRILS--RYSNEMLELVIFALEDLRKSLKEQGSDLMIRFG----R 118 (599)
Q Consensus 47 ~l~WfrrDLRl~DN~aL~~A~~~-~-~v~~vfi~d~~~~~--~~~~~r~~Fl~~sL~~L~~~L~~~g~~L~v~~g----~ 118 (599)
+|||||||||++||+||.+|++. . +|+||||+||..+. ..+.+|++||+|||.+|+++|+++|++|+|+.| +
T Consensus 4 ~l~WfRrDLRl~DN~aL~~A~~~~~~~vlpvyv~dp~~~~~~~~~~~r~~Fl~esL~~L~~~L~~~g~~L~v~~g~~~g~ 83 (472)
T PRK10674 4 HLVWFRNDLRLHDNLALAAACRDPSARVLALFIATPAQWAAHDMAPRQAAFINAQLNALQIALAEKGIPLLFHEVDDFAA 83 (472)
T ss_pred eEEEECCCCCcchHHHHHHHHhCCCCCEEEEEEECchhhccCCCCHHHHHHHHHHHHHHHHHHHHcCCceEEEecCCcCC
Confidence 69999999999999999999987 3 79999999997654 258999999999999999999999999999975 7
Q ss_pred HHHHHHHHHHHhCCcEEEEccccChhHHHHHHHHHHHHHhcccCCCCceeEeeCcccccCCCC----CCCCcchhhHHhc
Q 007536 119 VENVIRELVEEVKATSVFAEEEVEYHLRQMMAIVDETLAKVSLVDGKPKICLWQTPFYDIKNL----NDLPVSHNEFRKL 194 (599)
Q Consensus 119 ~~~~l~~l~~~~~~~~v~~~~~~~~~~~~~d~~v~~~l~~~gi~~~~~~~~~~~~~l~~~~~~----~~~p~~f~~f~k~ 194 (599)
+.++|++|+++++|+.||+|++++++++++|++|++.|. +| .+..+++++|++|+.+ +++|++||+|+++
T Consensus 84 ~~~vl~~l~~~~~i~~v~~~~~~~~~~~~rd~~v~~~l~--~i----~~~~~~~~~l~~~~~i~~~~~~~y~~ft~f~~~ 157 (472)
T PRK10674 84 SVEWLKQFCQQHQVTHLFYNYQYEVNERQRDAAVERALR--NV----VCQGFDDSVLLPPGSVMTGNHEMYKVFTPFKNA 157 (472)
T ss_pred HHHHHHHHHHHcCCCEEEEecccCHHHHHHHHHHHHHcC--CC----EEEEecCceEeCccccccCCCCCCCcccHHHHH
Confidence 999999999999999999999999999999999999986 44 7788999999999864 6789999999998
Q ss_pred ccc-CCCCCCCCCcCCCCCCCCCCC--CCChhhhhhhhccCcchhhhhhhhhcccchhhHHHHHhhhcccccccCCCCCC
Q 007536 195 QRP-LTSPILPPTLAGAKLEADWGP--LPTFDELKEFVNENPWKLEESWTLINNMSAETILTDKLSKLGKRSKRNLNNQH 271 (599)
Q Consensus 195 ~~~-~~~p~~~p~l~~~~~~~~~~~--~p~~~~l~~~~~~~~~~~~~~~~~~g~~~a~~~l~~~~~~~~~~~~~~~~~~~ 271 (599)
+.. +..+.+.+ .+. +....... .+....++. .
T Consensus 158 ~~~~~~~~~p~~-~~~-p~~~~~~~~~~~~~~~~~~----------------------------------------~--- 192 (472)
T PRK10674 158 FLKRLREGDPEC-VPA-PKVRSSGAIEPLPPIPFNY----------------------------------------P--- 192 (472)
T ss_pred HHHhhcccCCcc-CCC-CccccccccCCCCcccccC----------------------------------------c---
Confidence 643 22222111 110 00000000 000000000 0
Q ss_pred CCccccCCCccccCCCCccccChHHHHHHHHHHHHhhccCccchHHHHHHhhccccCCCCCCcccccccchhccccchhH
Q 007536 272 SPRKRLDKSFFVTDKGNTVGGGTNAVLNALQAYLRYLEGTVRDDWQELQEKLRNAESRDGASFATLFGPALCLGIISRRG 351 (599)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~gGe~~A~~~L~~fl~~~~~~~~~~Y~~~rn~~r~~~~~~~~~~tS~LSpyL~~G~IS~R~ 351 (599)
.. . . ....|+|||++|+++|+.|++ +++..|++.|| .|+.++||+|||||+|||||+|+
T Consensus 193 -----~~-~---~-~~~~~~gGe~~A~~~L~~f~~----~~l~~Y~~~r~-------~p~~~~tS~LSPyL~~G~iS~r~ 251 (472)
T PRK10674 193 -----QQ-S---F-DTALFPVGEKAAIAQLRQFCQ----QGAGEYEQQRD-------FPAVDGTSRLSAYLATGVLSPRQ 251 (472)
T ss_pred -----cc-c---c-ccCCCCCCHHHHHHHHHHHHH----HHHHHhccccC-------CCCccCCCCcChhhccCcCCHHH
Confidence 00 0 0 001489999999999999985 67999999875 36788999999999999999999
Q ss_pred HHHHHhh
Q 007536 352 VHYEAIK 358 (599)
Q Consensus 352 v~~~v~~ 358 (599)
||+++++
T Consensus 252 v~~~~~~ 258 (472)
T PRK10674 252 CLHRLLA 258 (472)
T ss_pred HHHHHHH
Confidence 9999976
No 7
>PF00875 DNA_photolyase: DNA photolyase from Prosite.; InterPro: IPR006050 DNA photolyases are enzymes that bind to DNA containing pyrimidine dimers: on absorption of visible light, they catalyse dimer splitting into the constituent monomers, a process called photoreactivation []. This is a DNA repair mechanism, repairing mismatched pyrimidine dimers induced by exposure to ultra-violet light []. The precise mechanisms involved in substrate binding, conversion of light energy to the mechanical energy needed to rupture the cyclobutane ring, and subsequent release of the product are uncertain []. Analysis of DNA lyases has revealed the presence of an intrinsic chromophore, all monomers containing a reduced FAD moiety, and, in addition, either a reduced pterin or 8-hydroxy-5-diazaflavin as a second chromophore [, ]. Either chromophore may act as the primary photon acceptor, peak absorptions occurring in the blue region of the spectrum and in the UV-B region, at a wavelength around 290nm []. This domain binds a light harvesting cofactor.; GO: 0003913 DNA photolyase activity, 0006281 DNA repair; PDB: 3UMV_A 2J07_A 1IQU_A 2J09_A 2J08_A 1IQR_A 1DNP_A 3FY4_B 2VTB_A 2J4D_B ....
Probab=100.00 E-value=1.5e-32 Score=257.53 Aligned_cols=155 Identities=26% Similarity=0.399 Sum_probs=127.9
Q ss_pred EEEEEcCCCCCCCCHHHHHHHhC-CCeEEEEEeCCccccc--CCHhHHHHHHHHHHHHHHHHHhcCCcEEEEEcCHHHHH
Q 007536 47 AVIWFKQDLRVDDHLGLVAASKY-QAVVPLYVFDHRILSR--YSNEMLELVIFALEDLRKSLKEQGSDLMIRFGRVENVI 123 (599)
Q Consensus 47 ~l~WfrrDLRl~DN~aL~~A~~~-~~v~~vfi~d~~~~~~--~~~~r~~Fl~~sL~~L~~~L~~~g~~L~v~~g~~~~~l 123 (599)
+|||||||||++||+||++|++. .+|+||||+||..... .|.+|++||+|||.+|+++|+++|++|+++.|++.+++
T Consensus 1 ~l~Wfr~DLRl~DN~aL~~A~~~~~~v~~vfv~d~~~~~~~~~~~~r~~Fl~~sL~~L~~~L~~~g~~L~v~~g~~~~~l 80 (165)
T PF00875_consen 1 VLVWFRRDLRLHDNPALHAAAQNGDPVLPVFVFDPEEFHPYRIGPRRRRFLLESLADLQESLRKLGIPLLVLRGDPEEVL 80 (165)
T ss_dssp EEEEESS--SSTT-HHHHHHHHTTSEEEEEEEE-HHGGTTCSSCHHHHHHHHHHHHHHHHHHHHTTS-EEEEESSHHHHH
T ss_pred CEEEEcCCCchhhhHHHHHHHHcCCCeEEEEEecccccccccCcchHHHHHHHHHHHHHHHHHhcCcceEEEecchHHHH
Confidence 69999999999999999999988 8999999999995443 49999999999999999999999999999999999999
Q ss_pred HHHHHHhCCcEEEEccccChhHHHHHHHHHHHHHhcccCCCCceeEeeCcccccCCCC----CCCCcchhhHHhccccC-
Q 007536 124 RELVEEVKATSVFAEEEVEYHLRQMMAIVDETLAKVSLVDGKPKICLWQTPFYDIKNL----NDLPVSHNEFRKLQRPL- 198 (599)
Q Consensus 124 ~~l~~~~~~~~v~~~~~~~~~~~~~d~~v~~~l~~~gi~~~~~~~~~~~~~l~~~~~~----~~~p~~f~~f~k~~~~~- 198 (599)
++|+++++|++||+|++|+++++++|++|++.|.+.|| .++++++++|++|+++ +++|++||+|+|++.+.
T Consensus 81 ~~l~~~~~~~~V~~~~~~~~~~~~rd~~v~~~l~~~~i----~~~~~~~~~L~~~~~i~~~~~~~~~vFtpf~k~~~~~~ 156 (165)
T PF00875_consen 81 PELAKEYGATAVYFNEEYTPYERRRDERVRKALKKHGI----KVHTFDDHTLVPPDDIPKKDGEPYKVFTPFRKKWEKQL 156 (165)
T ss_dssp HHHHHHHTESEEEEE---SHHHHHHHHHHHHHHHHTTS----EEEEE--SSSS-HHHCHSTTSSSHSSHHHHHHHHHCHC
T ss_pred HHHHHhcCcCeeEeccccCHHHHHHHHHHHHHHHhcce----EEEEECCcEEEeccccccCCCCCcccHHHHHHHHHhcC
Confidence 99999999999999999999999999999999998876 9999999999999864 78999999999996552
Q ss_pred C-CCCCCC
Q 007536 199 T-SPILPP 205 (599)
Q Consensus 199 ~-~p~~~p 205 (599)
. +|+|+|
T Consensus 157 ~~~p~p~p 164 (165)
T PF00875_consen 157 LEEPLPAP 164 (165)
T ss_dssp SC------
T ss_pred CCCCCCCC
Confidence 2 456655
No 8
>KOG0133 consensus Deoxyribodipyrimidine photolyase/cryptochrome [Replication, recombination and repair; Signal transduction mechanisms]
Probab=99.93 E-value=4e-26 Score=241.23 Aligned_cols=244 Identities=22% Similarity=0.278 Sum_probs=183.8
Q ss_pred CcEEEEEcCCCCCCCCHHHHHHHhC-CCeEEEEEeCCccccc--CCHhHHHHHHHHHHHHHHHHHhcCCcEEEEEcCHHH
Q 007536 45 GSAVIWFKQDLRVDDHLGLVAASKY-QAVVPLYVFDHRILSR--YSNEMLELVIFALEDLRKSLKEQGSDLMIRFGRVEN 121 (599)
Q Consensus 45 ~~~l~WfrrDLRl~DN~aL~~A~~~-~~v~~vfi~d~~~~~~--~~~~r~~Fl~~sL~~L~~~L~~~g~~L~v~~g~~~~ 121 (599)
.++|+|||+|||++|||||.+|+.. +++.||||+||+.... .|..+++||.|+|.+|+++|+++|++|.+++|.|+.
T Consensus 5 ~~~v~wfr~~lR~~dnpal~~a~~~~~~~~~v~i~d~~~~~~~~~g~~~~~~l~qsL~~ld~sl~~l~~~L~v~~~~p~~ 84 (531)
T KOG0133|consen 5 SKSVHWFRKGLRLHDNPALLAAAAGKEPVRPVFILDPEEAGSSNVGRNRWRFLLQSLEDLDQSLRELNSRLFVFRGHPIA 84 (531)
T ss_pred cceEEecccCcccccChhhHHHhccCCCceeEEEeCHhHhhccccchhHHHHHHHHHHHHHHHHHHhCCceEEEeCCchH
Confidence 5789999999999999999877766 8999999999988653 378899999999999999999999999999999999
Q ss_pred HHHHHHHHhCCcEEEEccccChhHHHHHHHHHHHHHhcccCCCCceeEeeCcccccCCC-----CCCCCcchhhHHhccc
Q 007536 122 VIRELVEEVKATSVFAEEEVEYHLRQMMAIVDETLAKVSLVDGKPKICLWQTPFYDIKN-----LNDLPVSHNEFRKLQR 196 (599)
Q Consensus 122 ~l~~l~~~~~~~~v~~~~~~~~~~~~~d~~v~~~l~~~gi~~~~~~~~~~~~~l~~~~~-----~~~~p~~f~~f~k~~~ 196 (599)
+|..+.++.++..|.++..+.+..+.+|..++..+.+.|+ .+.+...++++.++. .+++|..|..|+....
T Consensus 85 vl~~~~~~~~~~~l~~~~~~~p~~~vrD~~~~~~a~~l~i----~v~s~~s~~~~~~~~~i~~n~~k~pls~~~~~~~~~ 160 (531)
T KOG0133|consen 85 VLSRLLEQVGVQKLKFEYDMEPDGKVRDATIKSLATELGL----SVVSPVSHTLYLPDKIIEANGGKPPLSYKTFRGVCQ 160 (531)
T ss_pred HHhhhhhccceeEEEEEEeccCccccccHHHHHHHHHhhh----hhcccCchhhhcHHHHHHhcCCCCcccccccccccc
Confidence 9999999999999999999999999999999999999886 888888899999874 4888999999998754
Q ss_pred cCCCC-CCC-C----CcCCCCCC----CCCCCCCChhhhhhhhccCcchhhhhhhhhcccchhhHHHHHhhhcccccccC
Q 007536 197 PLTSP-ILP-P----TLAGAKLE----ADWGPLPTFDELKEFVNENPWKLEESWTLINNMSAETILTDKLSKLGKRSKRN 266 (599)
Q Consensus 197 ~~~~p-~~~-p----~l~~~~~~----~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~g~~~a~~~l~~~~~~~~~~~~~~ 266 (599)
.+..+ ++. + .++..+.. .....+|+++.+++..+
T Consensus 161 ~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~v~~~e~l~~~~~------------------------------------ 204 (531)
T KOG0133|consen 161 SMSAPKIPALVLSGLAVEKHPNFLANSKASAVVPTLELLRFIPS------------------------------------ 204 (531)
T ss_pred ccccccccccccccccCCCChhhhhhcccccccCCchhhccCcc------------------------------------
Confidence 44322 110 0 01110000 01122333333321100
Q ss_pred CCCCCCCccccCCCccccCCCCccccChHHHHHHHHHHHHhhccCccchHHHH-HHhhccccCCCC--CCcccccccchh
Q 007536 267 LNNQHSPRKRLDKSFFVTDKGNTVGGGTNAVLNALQAYLRYLEGTVRDDWQEL-QEKLRNAESRDG--ASFATLFGPALC 343 (599)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~gGe~~A~~~L~~fl~~~~~~~~~~Y~~~-rn~~r~~~~~~~--~~~tS~LSpyL~ 343 (599)
+ .. . ..|.||++.|+.+|+.||+ ..+-.|... |+. ..+. ...++.|||||+
T Consensus 205 --~-------~~------~--~~~~~g~s~al~~l~~~l~----~~~~~an~~~~~~-----~~~~~~~~s~~~Ls~yL~ 258 (531)
T KOG0133|consen 205 --N-------YG------E--VVWRGGESEALKRLDAHLK----VPLWVANLELRYS-----NANSRVKISTTVLSPYLK 258 (531)
T ss_pred --c-------cc------c--cccCCcccchhHHHHHHhh----HHHHHhhhhcccc-----ccchhcCCCcccccccee
Confidence 0 00 0 1379999999999999985 232222111 111 1223 467779999999
Q ss_pred ccccchhHHHH
Q 007536 344 LGIISRRGVHY 354 (599)
Q Consensus 344 ~G~IS~R~v~~ 354 (599)
|||+|.|.+|+
T Consensus 259 fg~~svr~~~~ 269 (531)
T KOG0133|consen 259 FGCLSVRYFYR 269 (531)
T ss_pred eccceeEeehh
Confidence 99999999996
No 9
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=99.88 E-value=1.9e-21 Score=199.66 Aligned_cols=124 Identities=48% Similarity=0.833 Sum_probs=114.2
Q ss_pred ceeEEEEEECCEEEEEEEcCCCCCeEEEECCCCCChHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCC-------CCCCH
Q 007536 405 VYSTRIWRWNGYQIQYTVAGKEGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPN-------IVYTE 477 (599)
Q Consensus 405 ~~~~~~~~~~g~~l~y~~~g~~~p~vlllHG~~~~~~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~-------~~~~~ 477 (599)
..+.++++++|.+++|...|+++++|||+||+++++..|..+++.|++. |+|+++|+||||.|+.+. ..|++
T Consensus 7 ~~~~~~~~~~~~~i~y~~~G~~~~~vlllHG~~~~~~~w~~~~~~L~~~-~~vi~~DlpG~G~S~~~~~~~~~~~~~~~~ 85 (294)
T PLN02824 7 QVETRTWRWKGYNIRYQRAGTSGPALVLVHGFGGNADHWRKNTPVLAKS-HRVYAIDLLGYGYSDKPNPRSAPPNSFYTF 85 (294)
T ss_pred CCCCceEEEcCeEEEEEEcCCCCCeEEEECCCCCChhHHHHHHHHHHhC-CeEEEEcCCCCCCCCCCccccccccccCCH
Confidence 3456799999999999999866799999999999999999999999986 899999999999998653 25899
Q ss_pred HHHHHHHHHHHHHhCCCCEEEEEeChHHHHHHHHHHhCCcccceEEEEcCCC
Q 007536 478 LMWSELLRDFTVEVVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAG 529 (599)
Q Consensus 478 ~~~~~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~~ 529 (599)
+++++++.+++++++.++++|+||||||.+++.+|.++|++|+++|++++..
T Consensus 86 ~~~a~~l~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lili~~~~ 137 (294)
T PLN02824 86 ETWGEQLNDFCSDVVGDPAFVICNSVGGVVGLQAAVDAPELVRGVMLINISL 137 (294)
T ss_pred HHHHHHHHHHHHHhcCCCeEEEEeCHHHHHHHHHHHhChhheeEEEEECCCc
Confidence 9999999999999999999999999999999999999999999999999864
No 10
>PRK03592 haloalkane dehalogenase; Provisional
Probab=99.85 E-value=1.3e-20 Score=193.63 Aligned_cols=124 Identities=25% Similarity=0.294 Sum_probs=115.1
Q ss_pred CceeEEEEEECCEEEEEEEcCCCCCeEEEECCCCCChHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCCCHHHHHHH
Q 007536 404 GVYSTRIWRWNGYQIQYTVAGKEGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNIVYTELMWSEL 483 (599)
Q Consensus 404 ~~~~~~~~~~~g~~l~y~~~g~~~p~vlllHG~~~~~~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~ 483 (599)
...+.++++++|.+++|...| ++++|||+||++++...|..+++.|++. ++|+++|+||||.|+.+...++.+.++++
T Consensus 5 ~~~~~~~~~~~g~~i~y~~~G-~g~~vvllHG~~~~~~~w~~~~~~L~~~-~~via~D~~G~G~S~~~~~~~~~~~~a~d 82 (295)
T PRK03592 5 PPGEMRRVEVLGSRMAYIETG-EGDPIVFLHGNPTSSYLWRNIIPHLAGL-GRCLAPDLIGMGASDKPDIDYTFADHARY 82 (295)
T ss_pred CCCcceEEEECCEEEEEEEeC-CCCEEEEECCCCCCHHHHHHHHHHHhhC-CEEEEEcCCCCCCCCCCCCCCCHHHHHHH
Confidence 345567889999999999998 5799999999999999999999999987 69999999999999987777899999999
Q ss_pred HHHHHHHhCCCCEEEEEeChHHHHHHHHHHhCCcccceEEEEcCCC
Q 007536 484 LRDFTVEVVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAG 529 (599)
Q Consensus 484 l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~~ 529 (599)
+.+++++++.++++++||||||.+|+.+|.++|++|+++|++++..
T Consensus 83 l~~ll~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~ 128 (295)
T PRK03592 83 LDAWFDALGLDDVVLVGHDWGSALGFDWAARHPDRVRGIAFMEAIV 128 (295)
T ss_pred HHHHHHHhCCCCeEEEEECHHHHHHHHHHHhChhheeEEEEECCCC
Confidence 9999999999999999999999999999999999999999999843
No 11
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=99.85 E-value=8.5e-21 Score=188.86 Aligned_cols=130 Identities=26% Similarity=0.369 Sum_probs=121.9
Q ss_pred CCCCceeEEEEEECCEEEEEEEcCCC-CCeEEEECCCCCChHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCC--CCCH
Q 007536 401 SNEGVYSTRIWRWNGYQIQYTVAGKE-GPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNI--VYTE 477 (599)
Q Consensus 401 ~~~~~~~~~~~~~~g~~l~y~~~g~~-~p~vlllHG~~~~~~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~--~~~~ 477 (599)
.....+++++++.+|++++|...|+. +|.|+++||++.++..|+.++..|+.+||+|+|+|+||+|.|+.|.. .|++
T Consensus 17 ~~~~~~~hk~~~~~gI~~h~~e~g~~~gP~illlHGfPe~wyswr~q~~~la~~~~rviA~DlrGyG~Sd~P~~~~~Yt~ 96 (322)
T KOG4178|consen 17 LNLSAISHKFVTYKGIRLHYVEGGPGDGPIVLLLHGFPESWYSWRHQIPGLASRGYRVIAPDLRGYGFSDAPPHISEYTI 96 (322)
T ss_pred cChhhcceeeEEEccEEEEEEeecCCCCCEEEEEccCCccchhhhhhhhhhhhcceEEEecCCCCCCCCCCCCCcceeeH
Confidence 45556788999999999999998865 89999999999999999999999999999999999999999998764 7999
Q ss_pred HHHHHHHHHHHHHhCCCCEEEEEeChHHHHHHHHHHhCCcccceEEEEcCCCC
Q 007536 478 LMWSELLRDFTVEVVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGN 530 (599)
Q Consensus 478 ~~~~~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~~~ 530 (599)
..++.++.++++.++.++++++||+||+++|+.+|..+|++|.++|+++.+..
T Consensus 97 ~~l~~di~~lld~Lg~~k~~lvgHDwGaivaw~la~~~Perv~~lv~~nv~~~ 149 (322)
T KOG4178|consen 97 DELVGDIVALLDHLGLKKAFLVGHDWGAIVAWRLALFYPERVDGLVTLNVPFP 149 (322)
T ss_pred HHHHHHHHHHHHHhccceeEEEeccchhHHHHHHHHhChhhcceEEEecCCCC
Confidence 99999999999999999999999999999999999999999999999998765
No 12
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.84 E-value=2.7e-20 Score=192.03 Aligned_cols=124 Identities=29% Similarity=0.441 Sum_probs=113.3
Q ss_pred ceeEEEEEECC-----EEEEEEEcCC-CCCeEEEECCCCCChHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCC--CCCC
Q 007536 405 VYSTRIWRWNG-----YQIQYTVAGK-EGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPN--IVYT 476 (599)
Q Consensus 405 ~~~~~~~~~~g-----~~l~y~~~g~-~~p~vlllHG~~~~~~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~--~~~~ 476 (599)
++..+++++++ .+|+|...|+ ++|+|||+||++++...|..+++.|.+.||+|+++|+||||.|+.+. ..++
T Consensus 18 ~~~~~~~~~~~~~~~~~~i~y~~~G~~~~~~lvliHG~~~~~~~w~~~~~~L~~~gy~vi~~Dl~G~G~S~~~~~~~~~~ 97 (302)
T PRK00870 18 PFAPHYVDVDDGDGGPLRMHYVDEGPADGPPVLLLHGEPSWSYLYRKMIPILAAAGHRVIAPDLIGFGRSDKPTRREDYT 97 (302)
T ss_pred CCCceeEeecCCCCceEEEEEEecCCCCCCEEEEECCCCCchhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCCCcccCC
Confidence 34567899999 8999999885 37899999999999999999999998778999999999999998654 3589
Q ss_pred HHHHHHHHHHHHHHhCCCCEEEEEeChHHHHHHHHHHhCCcccceEEEEcCC
Q 007536 477 ELMWSELLRDFTVEVVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSA 528 (599)
Q Consensus 477 ~~~~~~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~ 528 (599)
.+.+++++.+++++++.++++|+||||||.+|+.+|..+|++|.++|++++.
T Consensus 98 ~~~~a~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 149 (302)
T PRK00870 98 YARHVEWMRSWFEQLDLTDVTLVCQDWGGLIGLRLAAEHPDRFARLVVANTG 149 (302)
T ss_pred HHHHHHHHHHHHHHcCCCCEEEEEEChHHHHHHHHHHhChhheeEEEEeCCC
Confidence 9999999999999999999999999999999999999999999999999874
No 13
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=99.84 E-value=2.5e-20 Score=189.68 Aligned_cols=122 Identities=27% Similarity=0.287 Sum_probs=111.1
Q ss_pred EEEEEECCEEEEEEEc-CCC-CCeEEEECCCCCChHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCCCHHHHHHHHH
Q 007536 408 TRIWRWNGYQIQYTVA-GKE-GPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNIVYTELMWSELLR 485 (599)
Q Consensus 408 ~~~~~~~g~~l~y~~~-g~~-~p~vlllHG~~~~~~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~ 485 (599)
.++++++|.+++|... |++ +++|||+||++++...|..+++.|.+ +|+|+++|+||||.|+.+...++.+.+++++.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~plvllHG~~~~~~~w~~~~~~L~~-~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~~~ 82 (276)
T TIGR02240 4 FRTIDLDGQSIRTAVRPGKEGLTPLLIFNGIGANLELVFPFIEALDP-DLEVIAFDVPGVGGSSTPRHPYRFPGLAKLAA 82 (276)
T ss_pred EEEeccCCcEEEEEEecCCCCCCcEEEEeCCCcchHHHHHHHHHhcc-CceEEEECCCCCCCCCCCCCcCcHHHHHHHHH
Confidence 4678889999999774 333 58999999999999999999999987 59999999999999987766789999999999
Q ss_pred HHHHHhCCCCEEEEEeChHHHHHHHHHHhCCcccceEEEEcCCCC
Q 007536 486 DFTVEVVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGN 530 (599)
Q Consensus 486 ~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~~~ 530 (599)
++++.++.++++|+||||||.+++.+|.++|++|+++|+++++..
T Consensus 83 ~~i~~l~~~~~~LvG~S~GG~va~~~a~~~p~~v~~lvl~~~~~~ 127 (276)
T TIGR02240 83 RMLDYLDYGQVNAIGVSWGGALAQQFAHDYPERCKKLILAATAAG 127 (276)
T ss_pred HHHHHhCcCceEEEEECHHHHHHHHHHHHCHHHhhheEEeccCCc
Confidence 999999999999999999999999999999999999999998764
No 14
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=99.83 E-value=4.8e-19 Score=187.21 Aligned_cols=121 Identities=48% Similarity=0.839 Sum_probs=109.0
Q ss_pred EEEEECCE-EEEEEEcCCC-----CCeEEEECCCCCChHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCC-CCCCHHHHH
Q 007536 409 RIWRWNGY-QIQYTVAGKE-----GPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPN-IVYTELMWS 481 (599)
Q Consensus 409 ~~~~~~g~-~l~y~~~g~~-----~p~vlllHG~~~~~~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~-~~~~~~~~~ 481 (599)
+++.++|. +++|...|+. +|+|||+||++++...|.++++.|++ +|+|+++|+||||.|+.+. ..|+++.++
T Consensus 64 ~~~~~~g~~~i~Y~~~G~g~~~~~gp~lvllHG~~~~~~~w~~~~~~L~~-~~~via~Dl~G~G~S~~~~~~~~~~~~~a 142 (360)
T PLN02679 64 KKWKWKGEYSINYLVKGSPEVTSSGPPVLLVHGFGASIPHWRRNIGVLAK-NYTVYAIDLLGFGASDKPPGFSYTMETWA 142 (360)
T ss_pred ceEEECCceeEEEEEecCcccCCCCCeEEEECCCCCCHHHHHHHHHHHhc-CCEEEEECCCCCCCCCCCCCccccHHHHH
Confidence 46788887 9999998853 48999999999999999999999987 6999999999999998764 368999999
Q ss_pred HHHHHHHHHhCCCCEEEEEeChHHHHHHHHHHh-CCcccceEEEEcCCCC
Q 007536 482 ELLRDFTVEVVGEPVHLIGNSIGGYFVAIVACL-WPAVVKSVVLINSAGN 530 (599)
Q Consensus 482 ~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~-~p~~v~~lvli~~~~~ 530 (599)
+++.+++++++.++++||||||||.+++.++.. +|++|+++|++++++.
T Consensus 143 ~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~P~rV~~LVLi~~~~~ 192 (360)
T PLN02679 143 ELILDFLEEVVQKPTVLIGNSVGSLACVIAASESTRDLVRGLVLLNCAGG 192 (360)
T ss_pred HHHHHHHHHhcCCCeEEEEECHHHHHHHHHHHhcChhhcCEEEEECCccc
Confidence 999999999999999999999999999998874 7999999999998653
No 15
>PLN02578 hydrolase
Probab=99.82 E-value=6.9e-19 Score=185.65 Aligned_cols=121 Identities=45% Similarity=0.838 Sum_probs=112.5
Q ss_pred EEEEEECCEEEEEEEcCCCCCeEEEECCCCCChHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHH
Q 007536 408 TRIWRWNGYQIQYTVAGKEGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNIVYTELMWSELLRDF 487 (599)
Q Consensus 408 ~~~~~~~g~~l~y~~~g~~~p~vlllHG~~~~~~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~ 487 (599)
.++++++|.+++|...| ++|+|||+||++++...|..+++.|++ +|+|+++|+||||.|+.+...|+...+++++.++
T Consensus 68 ~~~~~~~~~~i~Y~~~g-~g~~vvliHG~~~~~~~w~~~~~~l~~-~~~v~~~D~~G~G~S~~~~~~~~~~~~a~~l~~~ 145 (354)
T PLN02578 68 YNFWTWRGHKIHYVVQG-EGLPIVLIHGFGASAFHWRYNIPELAK-KYKVYALDLLGFGWSDKALIEYDAMVWRDQVADF 145 (354)
T ss_pred ceEEEECCEEEEEEEcC-CCCeEEEECCCCCCHHHHHHHHHHHhc-CCEEEEECCCCCCCCCCcccccCHHHHHHHHHHH
Confidence 36788999999999988 578999999999999999999999987 5999999999999999887789999999999999
Q ss_pred HHHhCCCCEEEEEeChHHHHHHHHHHhCCcccceEEEEcCCCC
Q 007536 488 TVEVVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGN 530 (599)
Q Consensus 488 l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~~~ 530 (599)
++++..++++++||||||.+++.+|.++|++|+++|++++++.
T Consensus 146 i~~~~~~~~~lvG~S~Gg~ia~~~A~~~p~~v~~lvLv~~~~~ 188 (354)
T PLN02578 146 VKEVVKEPAVLVGNSLGGFTALSTAVGYPELVAGVALLNSAGQ 188 (354)
T ss_pred HHHhccCCeEEEEECHHHHHHHHHHHhChHhcceEEEECCCcc
Confidence 9999989999999999999999999999999999999998654
No 16
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.80 E-value=8.5e-19 Score=179.43 Aligned_cols=122 Identities=30% Similarity=0.367 Sum_probs=111.3
Q ss_pred eeEEEEEECCEEEEEEEcCCCCCeEEEECCCCCChHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCC-CCCHHHHHHHH
Q 007536 406 YSTRIWRWNGYQIQYTVAGKEGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNI-VYTELMWSELL 484 (599)
Q Consensus 406 ~~~~~~~~~g~~l~y~~~g~~~p~vlllHG~~~~~~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~-~~~~~~~~~~l 484 (599)
++.++++++|.+++|...| ++|+|||+||++.+...|..+++.|.+ +|+|+++|+||||.|+.+.. .++.+.+++++
T Consensus 14 ~~~~~~~~~~~~i~y~~~G-~~~~iv~lHG~~~~~~~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~ 91 (286)
T PRK03204 14 FESRWFDSSRGRIHYIDEG-TGPPILLCHGNPTWSFLYRDIIVALRD-RFRCVAPDYLGFGLSERPSGFGYQIDEHARVI 91 (286)
T ss_pred ccceEEEcCCcEEEEEECC-CCCEEEEECCCCccHHHHHHHHHHHhC-CcEEEEECCCCCCCCCCCCccccCHHHHHHHH
Confidence 5567899999999999988 579999999999999999999999987 59999999999999987643 68899999999
Q ss_pred HHHHHHhCCCCEEEEEeChHHHHHHHHHHhCCcccceEEEEcCCC
Q 007536 485 RDFTVEVVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAG 529 (599)
Q Consensus 485 ~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~~ 529 (599)
.+++++++.++++++||||||.+++.++..+|++|+++|++++..
T Consensus 92 ~~~~~~~~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~ 136 (286)
T PRK03204 92 GEFVDHLGLDRYLSMGQDWGGPISMAVAVERADRVRGVVLGNTWF 136 (286)
T ss_pred HHHHHHhCCCCEEEEEECccHHHHHHHHHhChhheeEEEEECccc
Confidence 999999999999999999999999999999999999999998754
No 17
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.78 E-value=2.8e-18 Score=173.67 Aligned_cols=123 Identities=28% Similarity=0.276 Sum_probs=112.2
Q ss_pred eEEEEEECCEEEEEEEcCCC-CCeEEEECCCCCChHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCC-CCCHHHHHHHH
Q 007536 407 STRIWRWNGYQIQYTVAGKE-GPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNI-VYTELMWSELL 484 (599)
Q Consensus 407 ~~~~~~~~g~~l~y~~~g~~-~p~vlllHG~~~~~~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~-~~~~~~~~~~l 484 (599)
..++++.+|.+++|...|++ +|+|||+||++++...|..+++.|++ +|+|+++|+||||.|+.+.. .++++.+++++
T Consensus 7 ~~~~~~~~~~~~~~~~~g~~~~~~vv~~hG~~~~~~~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l 85 (278)
T TIGR03056 7 CSRRVTVGPFHWHVQDMGPTAGPLLLLLHGTGASTHSWRDLMPPLAR-SFRVVAPDLPGHGFTRAPFRFRFTLPSMAEDL 85 (278)
T ss_pred ccceeeECCEEEEEEecCCCCCCeEEEEcCCCCCHHHHHHHHHHHhh-CcEEEeecCCCCCCCCCccccCCCHHHHHHHH
Confidence 34678899999999998864 78999999999999999999999987 59999999999999987655 68999999999
Q ss_pred HHHHHHhCCCCEEEEEeChHHHHHHHHHHhCCcccceEEEEcCCCC
Q 007536 485 RDFTVEVVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGN 530 (599)
Q Consensus 485 ~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~~~ 530 (599)
.+++++++.++++|+||||||.+++.+|..+|++++++|++++...
T Consensus 86 ~~~i~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~ 131 (278)
T TIGR03056 86 SALCAAEGLSPDGVIGHSAGAAIALRLALDGPVTPRMVVGINAALM 131 (278)
T ss_pred HHHHHHcCCCCceEEEECccHHHHHHHHHhCCcccceEEEEcCccc
Confidence 9999999889999999999999999999999999999999988543
No 18
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=99.77 E-value=8.2e-18 Score=181.35 Aligned_cols=128 Identities=23% Similarity=0.379 Sum_probs=110.0
Q ss_pred eeEEEEEECCEEEEEEEcCCC----CCeEEEECCCCCChHHHHH-HHHHHH---hCCCEEEEEcCCCCCCCCCCC-CCCC
Q 007536 406 YSTRIWRWNGYQIQYTVAGKE----GPAILLVHGFGAFLEHYRD-NIYDIA---DGGNRVWAITLLGFGRSEKPN-IVYT 476 (599)
Q Consensus 406 ~~~~~~~~~g~~l~y~~~g~~----~p~vlllHG~~~~~~~w~~-~~~~l~---~~g~~vi~~D~~G~G~S~~~~-~~~~ 476 (599)
+.+.+.+.+|.+++|...|+. +|+|||+||++++...|.. +++.|. +.+|+|+++|+||||.|+.+. ..|+
T Consensus 176 ~~~~~~~~~~~~l~~~~~gp~~~~~k~~VVLlHG~~~s~~~W~~~~~~~L~~~~~~~yrVia~Dl~G~G~S~~p~~~~yt 255 (481)
T PLN03087 176 FCTSWLSSSNESLFVHVQQPKDNKAKEDVLFIHGFISSSAFWTETLFPNFSDAAKSTYRLFAVDLLGFGRSPKPADSLYT 255 (481)
T ss_pred eeeeeEeeCCeEEEEEEecCCCCCCCCeEEEECCCCccHHHHHHHHHHHHHHHhhCCCEEEEECCCCCCCCcCCCCCcCC
Confidence 445678889999999998863 4799999999999999985 456665 357999999999999998763 4589
Q ss_pred HHHHHHHHH-HHHHHhCCCCEEEEEeChHHHHHHHHHHhCCcccceEEEEcCCCCCCC
Q 007536 477 ELMWSELLR-DFTVEVVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIP 533 (599)
Q Consensus 477 ~~~~~~~l~-~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~~~~~~ 533 (599)
++.+++++. .+++.++.++++++||||||.+++.+|.++|++|+++|+++++....+
T Consensus 256 l~~~a~~l~~~ll~~lg~~k~~LVGhSmGG~iAl~~A~~~Pe~V~~LVLi~~~~~~~~ 313 (481)
T PLN03087 256 LREHLEMIERSVLERYKVKSFHIVAHSLGCILALALAVKHPGAVKSLTLLAPPYYPVP 313 (481)
T ss_pred HHHHHHHHHHHHHHHcCCCCEEEEEECHHHHHHHHHHHhChHhccEEEEECCCccccc
Confidence 999999994 889999999999999999999999999999999999999998755443
No 19
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=99.77 E-value=5.3e-18 Score=179.24 Aligned_cols=120 Identities=24% Similarity=0.308 Sum_probs=110.0
Q ss_pred EEEECCEEEEEEEcCCC-CCeEEEECCCCCChHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCC----CCCHHHHHHHH
Q 007536 410 IWRWNGYQIQYTVAGKE-GPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNI----VYTELMWSELL 484 (599)
Q Consensus 410 ~~~~~g~~l~y~~~g~~-~p~vlllHG~~~~~~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~----~~~~~~~~~~l 484 (599)
.++.+|.+++|...|+. +|+||||||++++...|+.+++.|++ +|+|+++|+||||.|+.+.. .|+++.+++++
T Consensus 109 ~~~~~~~~~~y~~~G~~~~~~ivllHG~~~~~~~w~~~~~~L~~-~~~Via~DlpG~G~S~~p~~~~~~~ys~~~~a~~l 187 (383)
T PLN03084 109 QASSDLFRWFCVESGSNNNPPVLLIHGFPSQAYSYRKVLPVLSK-NYHAIAFDWLGFGFSDKPQPGYGFNYTLDEYVSSL 187 (383)
T ss_pred EEcCCceEEEEEecCCCCCCeEEEECCCCCCHHHHHHHHHHHhc-CCEEEEECCCCCCCCCCCcccccccCCHHHHHHHH
Confidence 34678999999999864 78999999999999999999999986 69999999999999987643 58999999999
Q ss_pred HHHHHHhCCCCEEEEEeChHHHHHHHHHHhCCcccceEEEEcCCCC
Q 007536 485 RDFTVEVVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGN 530 (599)
Q Consensus 485 ~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~~~ 530 (599)
.+++++++.++++|+|||+||.+++.+|..+|++|+++|+++++..
T Consensus 188 ~~~i~~l~~~~~~LvG~s~GG~ia~~~a~~~P~~v~~lILi~~~~~ 233 (383)
T PLN03084 188 ESLIDELKSDKVSLVVQGYFSPPVVKYASAHPDKIKKLILLNPPLT 233 (383)
T ss_pred HHHHHHhCCCCceEEEECHHHHHHHHHHHhChHhhcEEEEECCCCc
Confidence 9999999999999999999999999999999999999999998643
No 20
>PLN02965 Probable pheophorbidase
Probab=99.77 E-value=2.6e-18 Score=172.76 Aligned_cols=101 Identities=20% Similarity=0.215 Sum_probs=93.1
Q ss_pred eEEEECCCCCChHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCC-CCCHHHHHHHHHHHHHHhCC-CCEEEEEeChHHH
Q 007536 429 AILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNI-VYTELMWSELLRDFTVEVVG-EPVHLIGNSIGGY 506 (599)
Q Consensus 429 ~vlllHG~~~~~~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~-~~~~~~~~~~l~~~l~~l~~-~~~~lvGhS~Gg~ 506 (599)
+|||+||++.+...|..+++.|.+.||+|+++|+||||.|+.+.. .++.+.+++++.+++++++. ++++|+||||||.
T Consensus 5 ~vvllHG~~~~~~~w~~~~~~L~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~~lvGhSmGG~ 84 (255)
T PLN02965 5 HFVFVHGASHGAWCWYKLATLLDAAGFKSTCVDLTGAGISLTDSNTVSSSDQYNRPLFALLSDLPPDHKVILVGHSIGGG 84 (255)
T ss_pred EEEEECCCCCCcCcHHHHHHHHhhCCceEEEecCCcCCCCCCCccccCCHHHHHHHHHHHHHhcCCCCCEEEEecCcchH
Confidence 599999999999999999999977789999999999999986543 68899999999999999987 5999999999999
Q ss_pred HHHHHHHhCCcccceEEEEcCCC
Q 007536 507 FVAIVACLWPAVVKSVVLINSAG 529 (599)
Q Consensus 507 ia~~~a~~~p~~v~~lvli~~~~ 529 (599)
+++.+|.++|++|+++|++++..
T Consensus 85 ia~~~a~~~p~~v~~lvl~~~~~ 107 (255)
T PLN02965 85 SVTEALCKFTDKISMAIYVAAAM 107 (255)
T ss_pred HHHHHHHhCchheeEEEEEcccc
Confidence 99999999999999999999863
No 21
>PRK10749 lysophospholipase L2; Provisional
Probab=99.76 E-value=9.8e-18 Score=175.17 Aligned_cols=123 Identities=17% Similarity=0.149 Sum_probs=107.3
Q ss_pred EEEEEECCEEEEEEEcCC--CCCeEEEECCCCCChHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCC------CCCHHH
Q 007536 408 TRIWRWNGYQIQYTVAGK--EGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNI------VYTELM 479 (599)
Q Consensus 408 ~~~~~~~g~~l~y~~~g~--~~p~vlllHG~~~~~~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~------~~~~~~ 479 (599)
..++..+|.+++|..+++ .+++|||+||++++...|..++..|++.||+|+++|+||||.|+.+.. .++.+.
T Consensus 33 ~~~~~~~g~~l~~~~~~~~~~~~~vll~HG~~~~~~~y~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~ 112 (330)
T PRK10749 33 AEFTGVDDIPIRFVRFRAPHHDRVVVICPGRIESYVKYAELAYDLFHLGYDVLIIDHRGQGRSGRLLDDPHRGHVERFND 112 (330)
T ss_pred eEEEcCCCCEEEEEEccCCCCCcEEEEECCccchHHHHHHHHHHHHHCCCeEEEEcCCCCCCCCCCCCCCCcCccccHHH
Confidence 456778999999999874 367899999999999999999999988899999999999999975421 257889
Q ss_pred HHHHHHHHHHHh----CCCCEEEEEeChHHHHHHHHHHhCCcccceEEEEcCCCC
Q 007536 480 WSELLRDFTVEV----VGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGN 530 (599)
Q Consensus 480 ~~~~l~~~l~~l----~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~~~ 530 (599)
+++++.++++.+ ...+++++||||||.+++.+|..+|++|+++|+++|...
T Consensus 113 ~~~d~~~~~~~~~~~~~~~~~~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~p~~~ 167 (330)
T PRK10749 113 YVDDLAAFWQQEIQPGPYRKRYALAHSMGGAILTLFLQRHPGVFDAIALCAPMFG 167 (330)
T ss_pred HHHHHHHHHHHHHhcCCCCCeEEEEEcHHHHHHHHHHHhCCCCcceEEEECchhc
Confidence 999999998876 557999999999999999999999999999999998643
No 22
>PRK06489 hypothetical protein; Provisional
Probab=99.76 E-value=4.3e-18 Score=180.06 Aligned_cols=118 Identities=18% Similarity=0.252 Sum_probs=99.6
Q ss_pred EECCEEEEEEEcCCC--------CCeEEEECCCCCChHHHH--HHHHHH-------HhCCCEEEEEcCCCCCCCCCCCC-
Q 007536 412 RWNGYQIQYTVAGKE--------GPAILLVHGFGAFLEHYR--DNIYDI-------ADGGNRVWAITLLGFGRSEKPNI- 473 (599)
Q Consensus 412 ~~~g~~l~y~~~g~~--------~p~vlllHG~~~~~~~w~--~~~~~l-------~~~g~~vi~~D~~G~G~S~~~~~- 473 (599)
+.+|.+++|...|+. +|+|||+||++++...|. .+.+.| ...+|+||++|+||||.|+.+..
T Consensus 46 ~~~g~~i~y~~~G~~~~~~~~~~gpplvllHG~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~Via~Dl~GhG~S~~p~~~ 125 (360)
T PRK06489 46 TLPELRLHYTTLGTPHRNADGEIDNAVLVLHGTGGSGKSFLSPTFAGELFGPGQPLDASKYFIILPDGIGHGKSSKPSDG 125 (360)
T ss_pred CcCCceEEEEecCCCCcccccCCCCeEEEeCCCCCchhhhccchhHHHhcCCCCcccccCCEEEEeCCCCCCCCCCCCcC
Confidence 468899999999853 689999999999988886 455554 13469999999999999986543
Q ss_pred ------CCCHHHHHHHHHHHH-HHhCCCCEE-EEEeChHHHHHHHHHHhCCcccceEEEEcCCC
Q 007536 474 ------VYTELMWSELLRDFT-VEVVGEPVH-LIGNSIGGYFVAIVACLWPAVVKSVVLINSAG 529 (599)
Q Consensus 474 ------~~~~~~~~~~l~~~l-~~l~~~~~~-lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~~ 529 (599)
.|+++++++++.+++ +++++++++ |+||||||.+|+.+|.++|++|+++|++++.+
T Consensus 126 ~~~~~~~~~~~~~a~~~~~~l~~~lgi~~~~~lvG~SmGG~vAl~~A~~~P~~V~~LVLi~s~~ 189 (360)
T PRK06489 126 LRAAFPRYDYDDMVEAQYRLVTEGLGVKHLRLILGTSMGGMHAWMWGEKYPDFMDALMPMASQP 189 (360)
T ss_pred CCCCCCcccHHHHHHHHHHHHHHhcCCCceeEEEEECHHHHHHHHHHHhCchhhheeeeeccCc
Confidence 478899998887754 778888885 89999999999999999999999999999864
No 23
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.76 E-value=1e-17 Score=170.50 Aligned_cols=114 Identities=27% Similarity=0.444 Sum_probs=96.4
Q ss_pred CEEEEEEEcCCCCCeEEEECCCCCChHHHHH---HHHHHHhCCCEEEEEcCCCCCCCCCCCCC-CCHHHHHHHHHHHHHH
Q 007536 415 GYQIQYTVAGKEGPAILLVHGFGAFLEHYRD---NIYDIADGGNRVWAITLLGFGRSEKPNIV-YTELMWSELLRDFTVE 490 (599)
Q Consensus 415 g~~l~y~~~g~~~p~vlllHG~~~~~~~w~~---~~~~l~~~g~~vi~~D~~G~G~S~~~~~~-~~~~~~~~~l~~~l~~ 490 (599)
|..++|...| ++|+|||+||++++...|.. .+..+.+.||+|+++|+||||.|+.+... .....+++++.++++.
T Consensus 19 ~~~~~y~~~g-~~~~ivllHG~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~ 97 (282)
T TIGR03343 19 NFRIHYNEAG-NGEAVIMLHGGGPGAGGWSNYYRNIGPFVDAGYRVILKDSPGFNKSDAVVMDEQRGLVNARAVKGLMDA 97 (282)
T ss_pred ceeEEEEecC-CCCeEEEECCCCCchhhHHHHHHHHHHHHhCCCEEEEECCCCCCCCCCCcCcccccchhHHHHHHHHHH
Confidence 6779999888 57899999999988877764 35567667899999999999999865321 1222468889999999
Q ss_pred hCCCCEEEEEeChHHHHHHHHHHhCCcccceEEEEcCCC
Q 007536 491 VVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAG 529 (599)
Q Consensus 491 l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~~ 529 (599)
++.++++++||||||.+++.+|.++|++|+++|++++.+
T Consensus 98 l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 136 (282)
T TIGR03343 98 LDIEKAHLVGNSMGGATALNFALEYPDRIGKLILMGPGG 136 (282)
T ss_pred cCCCCeeEEEECchHHHHHHHHHhChHhhceEEEECCCC
Confidence 999999999999999999999999999999999999864
No 24
>PRK10349 carboxylesterase BioH; Provisional
Probab=99.75 E-value=6.3e-18 Score=169.86 Aligned_cols=107 Identities=22% Similarity=0.325 Sum_probs=92.1
Q ss_pred EEEEEcCCCCCeEEEECCCCCChHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCEE
Q 007536 418 IQYTVAGKEGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNIVYTELMWSELLRDFTVEVVGEPVH 497 (599)
Q Consensus 418 l~y~~~g~~~p~vlllHG~~~~~~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~ 497 (599)
++|...|.+.|+||||||+++++..|..+++.|.++ |+|+++|+||||.|+.+. .++.+++++++. ++..++++
T Consensus 4 ~~y~~~G~g~~~ivllHG~~~~~~~w~~~~~~L~~~-~~vi~~Dl~G~G~S~~~~-~~~~~~~~~~l~----~~~~~~~~ 77 (256)
T PRK10349 4 IWWQTKGQGNVHLVLLHGWGLNAEVWRCIDEELSSH-FTLHLVDLPGFGRSRGFG-ALSLADMAEAVL----QQAPDKAI 77 (256)
T ss_pred cchhhcCCCCCeEEEECCCCCChhHHHHHHHHHhcC-CEEEEecCCCCCCCCCCC-CCCHHHHHHHHH----hcCCCCeE
Confidence 678888854457999999999999999999999875 999999999999998654 567777666554 35678999
Q ss_pred EEEeChHHHHHHHHHHhCCcccceEEEEcCCCC
Q 007536 498 LIGNSIGGYFVAIVACLWPAVVKSVVLINSAGN 530 (599)
Q Consensus 498 lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~~~ 530 (599)
+|||||||.+|+.+|..+|++|+++|++++++.
T Consensus 78 lvGhS~Gg~ia~~~a~~~p~~v~~lili~~~~~ 110 (256)
T PRK10349 78 WLGWSLGGLVASQIALTHPERVQALVTVASSPC 110 (256)
T ss_pred EEEECHHHHHHHHHHHhChHhhheEEEecCccc
Confidence 999999999999999999999999999998643
No 25
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.75 E-value=3.8e-18 Score=179.28 Aligned_cols=125 Identities=16% Similarity=0.187 Sum_probs=103.9
Q ss_pred ceeEEEEEECCEEEEEEEcCCCCCeEEEECCCCCChH------------HHHHHHH---HHHhCCCEEEEEcCCCCCCCC
Q 007536 405 VYSTRIWRWNGYQIQYTVAGKEGPAILLVHGFGAFLE------------HYRDNIY---DIADGGNRVWAITLLGFGRSE 469 (599)
Q Consensus 405 ~~~~~~~~~~g~~l~y~~~g~~~p~vlllHG~~~~~~------------~w~~~~~---~l~~~g~~vi~~D~~G~G~S~ 469 (599)
.+..++.+.+|.+|+|...|+.++++|||||++++.. .|..+++ .|...+|+||++|+||||.|.
T Consensus 35 ~~~~~~~~~~~~~l~y~~~G~~~~p~vll~g~~~~~~~~~~~~~~~~~~~w~~~v~~~~~L~~~~~~Vi~~Dl~G~g~s~ 114 (343)
T PRK08775 35 PLSMRHAGLEDLRLRYELIGPAGAPVVFVAGGISAHRHVAATATFPEKGWWEGLVGSGRALDPARFRLLAFDFIGADGSL 114 (343)
T ss_pred ceeecCCCCCCceEEEEEeccCCCCEEEEecCCCcccccccccCCCCCCcchhccCCCCccCccccEEEEEeCCCCCCCC
Confidence 4556667779999999999965666777777666654 6888886 574336999999999999884
Q ss_pred CCCCCCCHHHHHHHHHHHHHHhCCCC-EEEEEeChHHHHHHHHHHhCCcccceEEEEcCCCCC
Q 007536 470 KPNIVYTELMWSELLRDFTVEVVGEP-VHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNV 531 (599)
Q Consensus 470 ~~~~~~~~~~~~~~l~~~l~~l~~~~-~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~~~~ 531 (599)
...++..++++++.++++++++++ ++||||||||++|+.+|.++|++|+++|++++....
T Consensus 115 --~~~~~~~~~a~dl~~ll~~l~l~~~~~lvG~SmGG~vA~~~A~~~P~~V~~LvLi~s~~~~ 175 (343)
T PRK08775 115 --DVPIDTADQADAIALLLDALGIARLHAFVGYSYGALVGLQFASRHPARVRTLVVVSGAHRA 175 (343)
T ss_pred --CCCCCHHHHHHHHHHHHHHcCCCcceEEEEECHHHHHHHHHHHHChHhhheEEEECccccC
Confidence 335788999999999999999976 479999999999999999999999999999987543
No 26
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.74 E-value=1.1e-17 Score=169.87 Aligned_cols=116 Identities=22% Similarity=0.268 Sum_probs=103.3
Q ss_pred ECCEEEEEEEcCCCCCeEEEECCCCCChHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCC-CCCCHHHHHHHHHHHHHHh
Q 007536 413 WNGYQIQYTVAGKEGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPN-IVYTELMWSELLRDFTVEV 491 (599)
Q Consensus 413 ~~g~~l~y~~~g~~~p~vlllHG~~~~~~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~-~~~~~~~~~~~l~~~l~~l 491 (599)
-+|.+++|...+..+|+|||+||++.+...|..++..|.+.||+|+++|+||||.|.... ..++++++++++.++++.+
T Consensus 4 ~~~~~~~~~~~~~~~p~vvliHG~~~~~~~w~~~~~~L~~~g~~vi~~dl~g~G~s~~~~~~~~~~~~~~~~l~~~i~~l 83 (273)
T PLN02211 4 ENGEEVTDMKPNRQPPHFVLIHGISGGSWCWYKIRCLMENSGYKVTCIDLKSAGIDQSDADSVTTFDEYNKPLIDFLSSL 83 (273)
T ss_pred ccccccccccccCCCCeEEEECCCCCCcCcHHHHHHHHHhCCCEEEEecccCCCCCCCCcccCCCHHHHHHHHHHHHHhc
Confidence 378888888865568999999999999999999999998889999999999999985433 3479999999999999988
Q ss_pred C-CCCEEEEEeChHHHHHHHHHHhCCcccceEEEEcCC
Q 007536 492 V-GEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSA 528 (599)
Q Consensus 492 ~-~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~ 528 (599)
. .++++||||||||.+++.++..+|++|+++|++++.
T Consensus 84 ~~~~~v~lvGhS~GG~v~~~~a~~~p~~v~~lv~~~~~ 121 (273)
T PLN02211 84 PENEKVILVGHSAGGLSVTQAIHRFPKKICLAVYVAAT 121 (273)
T ss_pred CCCCCEEEEEECchHHHHHHHHHhChhheeEEEEeccc
Confidence 5 589999999999999999999999999999999875
No 27
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.74 E-value=1.7e-17 Score=174.82 Aligned_cols=121 Identities=22% Similarity=0.255 Sum_probs=103.3
Q ss_pred EEEECCEEEEEEEcCCC----CCeEEEECCCCCChH-HHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCC-CCCHHHHHHH
Q 007536 410 IWRWNGYQIQYTVAGKE----GPAILLVHGFGAFLE-HYRDNIYDIADGGNRVWAITLLGFGRSEKPNI-VYTELMWSEL 483 (599)
Q Consensus 410 ~~~~~g~~l~y~~~g~~----~p~vlllHG~~~~~~-~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~-~~~~~~~~~~ 483 (599)
.++.+|.+|+|..+++. .++|||+||++++.. .|..+++.|++.||+|+++|+||||.|+.+.. ..+.+.++++
T Consensus 66 ~~~~~g~~l~~~~~~p~~~~~~~~iv~lHG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~d 145 (349)
T PLN02385 66 EVNSRGVEIFSKSWLPENSRPKAAVCFCHGYGDTCTFFFEGIARKIASSGYGVFAMDYPGFGLSEGLHGYIPSFDDLVDD 145 (349)
T ss_pred EEcCCCCEEEEEEEecCCCCCCeEEEEECCCCCccchHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCCCcCCHHHHHHH
Confidence 45568999999887752 467999999998865 46889999998899999999999999987543 3588899999
Q ss_pred HHHHHHHhCC------CCEEEEEeChHHHHHHHHHHhCCcccceEEEEcCCCC
Q 007536 484 LRDFTVEVVG------EPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGN 530 (599)
Q Consensus 484 l~~~l~~l~~------~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~~~ 530 (599)
+.++++.+.. .+++|+||||||++++.++.++|++|.++|++++...
T Consensus 146 v~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~~v~glVLi~p~~~ 198 (349)
T PLN02385 146 VIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQPNAWDGAILVAPMCK 198 (349)
T ss_pred HHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhCcchhhheeEeccccc
Confidence 9999887754 3799999999999999999999999999999998654
No 28
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.74 E-value=2.6e-17 Score=164.85 Aligned_cols=101 Identities=24% Similarity=0.292 Sum_probs=94.1
Q ss_pred CCeEEEECCCCCChHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCEEEEEeChHHH
Q 007536 427 GPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNIVYTELMWSELLRDFTVEVVGEPVHLIGNSIGGY 506 (599)
Q Consensus 427 ~p~vlllHG~~~~~~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~lvGhS~Gg~ 506 (599)
+|+|||+||++++...|..++..|++ +|+|+++|+||||.|..+. .++.+++++++.++++.++.++++|+||||||.
T Consensus 16 ~~~iv~lhG~~~~~~~~~~~~~~l~~-~~~vi~~D~~G~G~s~~~~-~~~~~~~~~d~~~~l~~l~~~~~~lvGhS~Gg~ 93 (255)
T PRK10673 16 NSPIVLVHGLFGSLDNLGVLARDLVN-DHDIIQVDMRNHGLSPRDP-VMNYPAMAQDLLDTLDALQIEKATFIGHSMGGK 93 (255)
T ss_pred CCCEEEECCCCCchhHHHHHHHHHhh-CCeEEEECCCCCCCCCCCC-CCCHHHHHHHHHHHHHHcCCCceEEEEECHHHH
Confidence 68999999999999999999999987 5999999999999998654 589999999999999999999999999999999
Q ss_pred HHHHHHHhCCcccceEEEEcCCC
Q 007536 507 FVAIVACLWPAVVKSVVLINSAG 529 (599)
Q Consensus 507 ia~~~a~~~p~~v~~lvli~~~~ 529 (599)
+++.+|..+|++|+++|++++++
T Consensus 94 va~~~a~~~~~~v~~lvli~~~~ 116 (255)
T PRK10673 94 AVMALTALAPDRIDKLVAIDIAP 116 (255)
T ss_pred HHHHHHHhCHhhcceEEEEecCC
Confidence 99999999999999999998753
No 29
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.73 E-value=2.8e-17 Score=163.38 Aligned_cols=101 Identities=21% Similarity=0.158 Sum_probs=91.7
Q ss_pred CCeEEEECCCCCChHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCEEEEEeChHHH
Q 007536 427 GPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNIVYTELMWSELLRDFTVEVVGEPVHLIGNSIGGY 506 (599)
Q Consensus 427 ~p~vlllHG~~~~~~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~lvGhS~Gg~ 506 (599)
+|+|||+||++++...|..+++.| + +|+|+++|+||||.|+.+. ..+.+.+++++.+++++++.++++++||||||.
T Consensus 2 ~p~vvllHG~~~~~~~w~~~~~~l-~-~~~vi~~D~~G~G~S~~~~-~~~~~~~~~~l~~~l~~~~~~~~~lvG~S~Gg~ 78 (242)
T PRK11126 2 LPWLVFLHGLLGSGQDWQPVGEAL-P-DYPRLYIDLPGHGGSAAIS-VDGFADVSRLLSQTLQSYNILPYWLVGYSLGGR 78 (242)
T ss_pred CCEEEEECCCCCChHHHHHHHHHc-C-CCCEEEecCCCCCCCCCcc-ccCHHHHHHHHHHHHHHcCCCCeEEEEECHHHH
Confidence 588999999999999999999988 4 5999999999999998765 358899999999999999999999999999999
Q ss_pred HHHHHHHhCCcc-cceEEEEcCCCC
Q 007536 507 FVAIVACLWPAV-VKSVVLINSAGN 530 (599)
Q Consensus 507 ia~~~a~~~p~~-v~~lvli~~~~~ 530 (599)
+|+.+|.++|+. |+++|++++.+.
T Consensus 79 va~~~a~~~~~~~v~~lvl~~~~~~ 103 (242)
T PRK11126 79 IAMYYACQGLAGGLCGLIVEGGNPG 103 (242)
T ss_pred HHHHHHHhCCcccccEEEEeCCCCC
Confidence 999999999765 999999987643
No 30
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.73 E-value=3.4e-17 Score=162.94 Aligned_cols=112 Identities=21% Similarity=0.315 Sum_probs=99.9
Q ss_pred EEEEEcCC---CCCeEEEECCCCCChHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCC-CCCCHHHHHHHHHHHHHHhCC
Q 007536 418 IQYTVAGK---EGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPN-IVYTELMWSELLRDFTVEVVG 493 (599)
Q Consensus 418 l~y~~~g~---~~p~vlllHG~~~~~~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~-~~~~~~~~~~~l~~~l~~l~~ 493 (599)
|+|...|+ ++|+|||+||+++++..|..+++.|.+ +|+|+++|+||||.|+.+. ..++.+++++++.++++.++.
T Consensus 1 ~~~~~~~~~~~~~~~iv~lhG~~~~~~~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~i~~~~~ 79 (257)
T TIGR03611 1 MHYELHGPPDADAPVVVLSSGLGGSGSYWAPQLDVLTQ-RFHVVTYDHRGTGRSPGELPPGYSIAHMADDVLQLLDALNI 79 (257)
T ss_pred CEEEEecCCCCCCCEEEEEcCCCcchhHHHHHHHHHHh-ccEEEEEcCCCCCCCCCCCcccCCHHHHHHHHHHHHHHhCC
Confidence 46666674 478999999999999999999988876 6999999999999998643 468999999999999999999
Q ss_pred CCEEEEEeChHHHHHHHHHHhCCcccceEEEEcCCCC
Q 007536 494 EPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGN 530 (599)
Q Consensus 494 ~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~~~ 530 (599)
++++++||||||.+|+.++..+|++|+++|++++...
T Consensus 80 ~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~ 116 (257)
T TIGR03611 80 ERFHFVGHALGGLIGLQLALRYPERLLSLVLINAWSR 116 (257)
T ss_pred CcEEEEEechhHHHHHHHHHHChHHhHHheeecCCCC
Confidence 9999999999999999999999999999999997544
No 31
>PHA02857 monoglyceride lipase; Provisional
Probab=99.71 E-value=1e-16 Score=162.97 Aligned_cols=121 Identities=20% Similarity=0.315 Sum_probs=96.5
Q ss_pred EEEECCEEEEEEEcCCC---CCeEEEECCCCCChHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCC-CCCHHHHHHHHH
Q 007536 410 IWRWNGYQIQYTVAGKE---GPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNI-VYTELMWSELLR 485 (599)
Q Consensus 410 ~~~~~g~~l~y~~~g~~---~p~vlllHG~~~~~~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~-~~~~~~~~~~l~ 485 (599)
++.-||.+|+|..+-+. .+.|+++||++++...|..+++.|++.||+|+++|+||||.|+.... ..+...+.+++.
T Consensus 5 ~~~~~g~~l~~~~~~~~~~~~~~v~llHG~~~~~~~~~~~~~~l~~~g~~via~D~~G~G~S~~~~~~~~~~~~~~~d~~ 84 (276)
T PHA02857 5 MFNLDNDYIYCKYWKPITYPKALVFISHGAGEHSGRYEELAENISSLGILVFSHDHIGHGRSNGEKMMIDDFGVYVRDVV 84 (276)
T ss_pred eecCCCCEEEEEeccCCCCCCEEEEEeCCCccccchHHHHHHHHHhCCCEEEEccCCCCCCCCCccCCcCCHHHHHHHHH
Confidence 45558999999876542 44566779999999999999999998899999999999999975432 224445555555
Q ss_pred HHHHHh----CCCCEEEEEeChHHHHHHHHHHhCCcccceEEEEcCCCC
Q 007536 486 DFTVEV----VGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGN 530 (599)
Q Consensus 486 ~~l~~l----~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~~~ 530 (599)
+.+..+ ...+++|+||||||.+|+.+|..+|++|+++|++++...
T Consensus 85 ~~l~~~~~~~~~~~~~lvG~S~GG~ia~~~a~~~p~~i~~lil~~p~~~ 133 (276)
T PHA02857 85 QHVVTIKSTYPGVPVFLLGHSMGATISILAAYKNPNLFTAMILMSPLVN 133 (276)
T ss_pred HHHHHHHhhCCCCCEEEEEcCchHHHHHHHHHhCccccceEEEeccccc
Confidence 555443 346899999999999999999999999999999998643
No 32
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.71 E-value=9.6e-17 Score=158.39 Aligned_cols=112 Identities=21% Similarity=0.320 Sum_probs=101.0
Q ss_pred EEEEEcCCC--CCeEEEECCCCCChHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCC
Q 007536 418 IQYTVAGKE--GPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNIVYTELMWSELLRDFTVEVVGEP 495 (599)
Q Consensus 418 l~y~~~g~~--~p~vlllHG~~~~~~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~ 495 (599)
++|...|+. +|+|||+||++++...|..+++.|.. ||+|+++|+||||.|+.+...++.+++++++.++++.++.++
T Consensus 2 ~~~~~~g~~~~~~~li~~hg~~~~~~~~~~~~~~l~~-~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~~~~~~ 80 (251)
T TIGR02427 2 LHYRLDGAADGAPVLVFINSLGTDLRMWDPVLPALTP-DFRVLRYDKRGHGLSDAPEGPYSIEDLADDVLALLDHLGIER 80 (251)
T ss_pred ceEEeecCCCCCCeEEEEcCcccchhhHHHHHHHhhc-ccEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCc
Confidence 567777753 67899999999999999999999875 799999999999999877667899999999999999999899
Q ss_pred EEEEEeChHHHHHHHHHHhCCcccceEEEEcCCCC
Q 007536 496 VHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGN 530 (599)
Q Consensus 496 ~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~~~ 530 (599)
++++||||||.+++.+|..+|++|+++|+++++..
T Consensus 81 v~liG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~ 115 (251)
T TIGR02427 81 AVFCGLSLGGLIAQGLAARRPDRVRALVLSNTAAK 115 (251)
T ss_pred eEEEEeCchHHHHHHHHHHCHHHhHHHhhccCccc
Confidence 99999999999999999999999999999987643
No 33
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.71 E-value=9e-17 Score=167.91 Aligned_cols=122 Identities=23% Similarity=0.236 Sum_probs=100.3
Q ss_pred EEEEECCEEEEEEEcCCC-----CCeEEEECCCCCCh-HHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCC-CCCHHHHH
Q 007536 409 RIWRWNGYQIQYTVAGKE-----GPAILLVHGFGAFL-EHYRDNIYDIADGGNRVWAITLLGFGRSEKPNI-VYTELMWS 481 (599)
Q Consensus 409 ~~~~~~g~~l~y~~~g~~-----~p~vlllHG~~~~~-~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~-~~~~~~~~ 481 (599)
.+...||.+|+|..+++. .++|||+||++.+. ..|..++..|+++||+|+++|+||||.|+.... ..+.+.++
T Consensus 36 ~~~~~dg~~l~~~~~~~~~~~~~~~~VvllHG~~~~~~~~~~~~~~~L~~~Gy~V~~~D~rGhG~S~~~~~~~~~~~~~~ 115 (330)
T PLN02298 36 FFTSPRGLSLFTRSWLPSSSSPPRALIFMVHGYGNDISWTFQSTAIFLAQMGFACFALDLEGHGRSEGLRAYVPNVDLVV 115 (330)
T ss_pred eEEcCCCCEEEEEEEecCCCCCCceEEEEEcCCCCCcceehhHHHHHHHhCCCEEEEecCCCCCCCCCccccCCCHHHHH
Confidence 345569999999876532 34699999998664 356677888988899999999999999975433 35788889
Q ss_pred HHHHHHHHHhCC------CCEEEEEeChHHHHHHHHHHhCCcccceEEEEcCCCC
Q 007536 482 ELLRDFTVEVVG------EPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGN 530 (599)
Q Consensus 482 ~~l~~~l~~l~~------~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~~~ 530 (599)
+|+.++++.+.. .+++|+||||||.+++.++.++|++|+++|++++...
T Consensus 116 ~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~ 170 (330)
T PLN02298 116 EDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPEGFDGAVLVAPMCK 170 (330)
T ss_pred HHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCcccceeEEEeccccc
Confidence 999999987743 4799999999999999999999999999999998643
No 34
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.70 E-value=1.6e-16 Score=160.47 Aligned_cols=120 Identities=21% Similarity=0.262 Sum_probs=101.5
Q ss_pred EEEECCEEEEEEEcCCC--CCeEEEECCCCCChH-HHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCC---CCCHHHHHHH
Q 007536 410 IWRWNGYQIQYTVAGKE--GPAILLVHGFGAFLE-HYRDNIYDIADGGNRVWAITLLGFGRSEKPNI---VYTELMWSEL 483 (599)
Q Consensus 410 ~~~~~g~~l~y~~~g~~--~p~vlllHG~~~~~~-~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~---~~~~~~~~~~ 483 (599)
+++++|..+.|...++. +++|||+||++++.. .|..+...+.+.||+|+++|+||||.|..+.. .++++.++++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~vl~~hG~~g~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~~ 85 (288)
T TIGR01250 6 IITVDGGYHLFTKTGGEGEKIKLLLLHGGPGMSHEYLENLRELLKEEGREVIMYDQLGCGYSDQPDDSDELWTIDYFVDE 85 (288)
T ss_pred eecCCCCeEEEEeccCCCCCCeEEEEcCCCCccHHHHHHHHHHHHhcCCEEEEEcCCCCCCCCCCCcccccccHHHHHHH
Confidence 57788888999877643 689999999866654 45555555655589999999999999986532 3789999999
Q ss_pred HHHHHHHhCCCCEEEEEeChHHHHHHHHHHhCCcccceEEEEcCCC
Q 007536 484 LRDFTVEVVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAG 529 (599)
Q Consensus 484 l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~~ 529 (599)
+.++++.++.++++++||||||.+++.+|..+|++|+++|++++..
T Consensus 86 ~~~~~~~~~~~~~~liG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 131 (288)
T TIGR01250 86 LEEVREKLGLDKFYLLGHSWGGMLAQEYALKYGQHLKGLIISSMLD 131 (288)
T ss_pred HHHHHHHcCCCcEEEEEeehHHHHHHHHHHhCccccceeeEecccc
Confidence 9999999998999999999999999999999999999999998754
No 35
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.70 E-value=6.5e-16 Score=154.41 Aligned_cols=126 Identities=33% Similarity=0.522 Sum_probs=103.2
Q ss_pred eeEEEEEE-CCEEEEEEEcC---CCCCeEEEECCCCCChHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCC----CH
Q 007536 406 YSTRIWRW-NGYQIQYTVAG---KEGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNIVY----TE 477 (599)
Q Consensus 406 ~~~~~~~~-~g~~l~y~~~g---~~~p~vlllHG~~~~~~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~----~~ 477 (599)
...+++.+ ++..+...... ..++++|||||+|++...|-...+.|++ .++|+++|++|+|.|+.|.... ..
T Consensus 65 ~~~~~v~i~~~~~iw~~~~~~~~~~~~plVliHGyGAg~g~f~~Nf~~La~-~~~vyaiDllG~G~SSRP~F~~d~~~~e 143 (365)
T KOG4409|consen 65 YSKKYVRIPNGIEIWTITVSNESANKTPLVLIHGYGAGLGLFFRNFDDLAK-IRNVYAIDLLGFGRSSRPKFSIDPTTAE 143 (365)
T ss_pred cceeeeecCCCceeEEEeecccccCCCcEEEEeccchhHHHHHHhhhhhhh-cCceEEecccCCCCCCCCCCCCCcccch
Confidence 33444444 34444444332 2378999999999999999999999998 5999999999999999876422 34
Q ss_pred HHHHHHHHHHHHHhCCCCEEEEEeChHHHHHHHHHHhCCcccceEEEEcCCCCCC
Q 007536 478 LMWSELLRDFTVEVVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVI 532 (599)
Q Consensus 478 ~~~~~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~~~~~ 532 (599)
..+.+-+++.....++++.+|+|||+||++|..+|.+||++|+.|||++|.+.+.
T Consensus 144 ~~fvesiE~WR~~~~L~KmilvGHSfGGYLaa~YAlKyPerV~kLiLvsP~Gf~~ 198 (365)
T KOG4409|consen 144 KEFVESIEQWRKKMGLEKMILVGHSFGGYLAAKYALKYPERVEKLILVSPWGFPE 198 (365)
T ss_pred HHHHHHHHHHHHHcCCcceeEeeccchHHHHHHHHHhChHhhceEEEeccccccc
Confidence 4678888888888999999999999999999999999999999999999988765
No 36
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.70 E-value=1.1e-16 Score=155.27 Aligned_cols=100 Identities=31% Similarity=0.473 Sum_probs=92.4
Q ss_pred EEEECCCCCChHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCC--CCCCHHHHHHHHHHHHHHhCCCCEEEEEeChHHHH
Q 007536 430 ILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPN--IVYTELMWSELLRDFTVEVVGEPVHLIGNSIGGYF 507 (599)
Q Consensus 430 vlllHG~~~~~~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~--~~~~~~~~~~~l~~~l~~l~~~~~~lvGhS~Gg~i 507 (599)
|||+||++++...|..+++.|+ +||+|+++|+||||.|+.+. ..++.+++++++.+++++++.++++++|||+||.+
T Consensus 1 vv~~hG~~~~~~~~~~~~~~l~-~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvG~S~Gg~~ 79 (228)
T PF12697_consen 1 VVFLHGFGGSSESWDPLAEALA-RGYRVIAFDLPGHGRSDPPPDYSPYSIEDYAEDLAELLDALGIKKVILVGHSMGGMI 79 (228)
T ss_dssp EEEE-STTTTGGGGHHHHHHHH-TTSEEEEEECTTSTTSSSHSSGSGGSHHHHHHHHHHHHHHTTTSSEEEEEETHHHHH
T ss_pred eEEECCCCCCHHHHHHHHHHHh-CCCEEEEEecCCccccccccccCCcchhhhhhhhhhccccccccccccccccccccc
Confidence 7999999999999999999996 68999999999999998765 36789999999999999999999999999999999
Q ss_pred HHHHHHhCCcccceEEEEcCCCC
Q 007536 508 VAIVACLWPAVVKSVVLINSAGN 530 (599)
Q Consensus 508 a~~~a~~~p~~v~~lvli~~~~~ 530 (599)
++.++..+|++|+++|++++...
T Consensus 80 a~~~a~~~p~~v~~~vl~~~~~~ 102 (228)
T PF12697_consen 80 ALRLAARYPDRVKGLVLLSPPPP 102 (228)
T ss_dssp HHHHHHHSGGGEEEEEEESESSS
T ss_pred ccccccccccccccceeeccccc
Confidence 99999999999999999999753
No 37
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.69 E-value=1.1e-16 Score=168.88 Aligned_cols=120 Identities=18% Similarity=0.227 Sum_probs=100.5
Q ss_pred EECCEEEEEEEcCC----CCCeEEEECCCCCChH-----------HHHHHHH---HHHhCCCEEEEEcCCC--CCCCCCC
Q 007536 412 RWNGYQIQYTVAGK----EGPAILLVHGFGAFLE-----------HYRDNIY---DIADGGNRVWAITLLG--FGRSEKP 471 (599)
Q Consensus 412 ~~~g~~l~y~~~g~----~~p~vlllHG~~~~~~-----------~w~~~~~---~l~~~g~~vi~~D~~G--~G~S~~~ 471 (599)
+++|.+|+|..+|+ .+++|||+||++++.+ .|..++. .|...+|+||++|+|| ||.|...
T Consensus 12 ~~~~~~~~y~~~g~~~~~~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~~~g~s~~~ 91 (351)
T TIGR01392 12 VLSDVRVAYETYGTLNAERSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDTDRYFVVCSNVLGGCYGSTGPS 91 (351)
T ss_pred ccCCceEEEEeccccCCCCCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCCCceEEEEecCCCCCCCCCCCC
Confidence 45889999999984 2579999999999774 3777652 5545679999999999 5665421
Q ss_pred ----C--------CCCCHHHHHHHHHHHHHHhCCCC-EEEEEeChHHHHHHHHHHhCCcccceEEEEcCCCCC
Q 007536 472 ----N--------IVYTELMWSELLRDFTVEVVGEP-VHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNV 531 (599)
Q Consensus 472 ----~--------~~~~~~~~~~~l~~~l~~l~~~~-~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~~~~ 531 (599)
. ..++++++++++.+++++++.++ ++|+||||||++++.+|.++|++|+++|++++....
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 164 (351)
T TIGR01392 92 SINPGGRPYGSDFPLITIRDDVKAQKLLLDHLGIEQIAAVVGGSMGGMQALEWAIDYPERVRAIVVLATSARH 164 (351)
T ss_pred CCCCCCCcCCCCCCCCcHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEccCCcC
Confidence 1 14789999999999999999998 999999999999999999999999999999997653
No 38
>PRK07581 hypothetical protein; Validated
Probab=99.69 E-value=5.3e-17 Score=170.33 Aligned_cols=119 Identities=17% Similarity=0.159 Sum_probs=92.6
Q ss_pred EECCEEEEEEEcCC---CC-CeEEEECCCCCChHHHHHHH---HHHHhCCCEEEEEcCCCCCCCCCCCC---CCCHHH--
Q 007536 412 RWNGYQIQYTVAGK---EG-PAILLVHGFGAFLEHYRDNI---YDIADGGNRVWAITLLGFGRSEKPNI---VYTELM-- 479 (599)
Q Consensus 412 ~~~g~~l~y~~~g~---~~-p~vlllHG~~~~~~~w~~~~---~~l~~~g~~vi~~D~~G~G~S~~~~~---~~~~~~-- 479 (599)
+++|.+|+|...|+ .+ |+||++||++++...|..++ +.|...+|+||++|+||||.|+.+.. .|+.+.
T Consensus 22 ~~~~~~l~y~~~G~~~~~~~~~vll~~~~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~ 101 (339)
T PRK07581 22 TLPDARLAYKTYGTLNAAKDNAILYPTWYSGTHQDNEWLIGPGRALDPEKYFIIIPNMFGNGLSSSPSNTPAPFNAARFP 101 (339)
T ss_pred CcCCceEEEEecCccCCCCCCEEEEeCCCCCCcccchhhccCCCccCcCceEEEEecCCCCCCCCCCCCCCCCCCCCCCC
Confidence 45889999999885 23 55777777777776776544 36655579999999999999986532 344332
Q ss_pred ---HHHHHHH----HHHHhCCCC-EEEEEeChHHHHHHHHHHhCCcccceEEEEcCCCC
Q 007536 480 ---WSELLRD----FTVEVVGEP-VHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGN 530 (599)
Q Consensus 480 ---~~~~l~~----~l~~l~~~~-~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~~~ 530 (599)
+++++.+ +++++++++ ++||||||||++|+.+|.+||++|+++|++++...
T Consensus 102 ~~~~~~~~~~~~~~l~~~lgi~~~~~lvG~S~GG~va~~~a~~~P~~V~~Lvli~~~~~ 160 (339)
T PRK07581 102 HVTIYDNVRAQHRLLTEKFGIERLALVVGWSMGAQQTYHWAVRYPDMVERAAPIAGTAK 160 (339)
T ss_pred ceeHHHHHHHHHHHHHHHhCCCceEEEEEeCHHHHHHHHHHHHCHHHHhhheeeecCCC
Confidence 4555554 667899999 58999999999999999999999999999998654
No 39
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.66 E-value=4.8e-16 Score=160.68 Aligned_cols=120 Identities=17% Similarity=0.099 Sum_probs=99.5
Q ss_pred EEEE-CCEEEEEEEcCCC-CCeEEEECCCCCChHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCC--CCCHHHHHHHHH
Q 007536 410 IWRW-NGYQIQYTVAGKE-GPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNI--VYTELMWSELLR 485 (599)
Q Consensus 410 ~~~~-~g~~l~y~~~g~~-~p~vlllHG~~~~~~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~--~~~~~~~~~~l~ 485 (599)
++.. +|.+|+|...|+. +++|||+||++++...+ .+...+...+|+|+++|+||||.|+.+.. .++..++++++.
T Consensus 8 ~~~~~~~~~l~y~~~g~~~~~~lvllHG~~~~~~~~-~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~ 86 (306)
T TIGR01249 8 YLNVSDNHQLYYEQSGNPDGKPVVFLHGGPGSGTDP-GCRRFFDPETYRIVLFDQRGCGKSTPHACLEENTTWDLVADIE 86 (306)
T ss_pred eEEcCCCcEEEEEECcCCCCCEEEEECCCCCCCCCH-HHHhccCccCCEEEEECCCCCCCCCCCCCcccCCHHHHHHHHH
Confidence 4444 5789999998853 78999999988775543 34444544579999999999999986542 467888999999
Q ss_pred HHHHHhCCCCEEEEEeChHHHHHHHHHHhCCcccceEEEEcCCCC
Q 007536 486 DFTVEVVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGN 530 (599)
Q Consensus 486 ~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~~~ 530 (599)
.+++.++.++++++||||||.+++.++.++|++|+++|++++...
T Consensus 87 ~l~~~l~~~~~~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~~ 131 (306)
T TIGR01249 87 KLREKLGIKNWLVFGGSWGSTLALAYAQTHPEVVTGLVLRGIFLL 131 (306)
T ss_pred HHHHHcCCCCEEEEEECHHHHHHHHHHHHChHhhhhheeeccccC
Confidence 999999989999999999999999999999999999999987643
No 40
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.66 E-value=3.6e-16 Score=166.44 Aligned_cols=121 Identities=20% Similarity=0.217 Sum_probs=99.6
Q ss_pred EEECCEEEEEEEcCC----CCCeEEEECCCCCChHH-------------HHHHHH---HHHhCCCEEEEEcCCCC-CCCC
Q 007536 411 WRWNGYQIQYTVAGK----EGPAILLVHGFGAFLEH-------------YRDNIY---DIADGGNRVWAITLLGF-GRSE 469 (599)
Q Consensus 411 ~~~~g~~l~y~~~g~----~~p~vlllHG~~~~~~~-------------w~~~~~---~l~~~g~~vi~~D~~G~-G~S~ 469 (599)
.+++|.+|+|...|. .+|+|||+||++++... |..++. .|...+|+||++|++|+ |.|+
T Consensus 28 ~~~~~~~~~y~~~G~~~~~~~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~Dl~G~~~~s~ 107 (379)
T PRK00175 28 AVLPPVELAYETYGTLNADRSNAVLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGKPIDTDRYFVICSNVLGGCKGST 107 (379)
T ss_pred CCcCCceEEEEeccccCCCCCCEEEEeCCcCCchhhcccccccCCCCcchhhccCCCCccCccceEEEeccCCCCCCCCC
Confidence 346888999999884 26899999999999875 666652 34234799999999983 5453
Q ss_pred CCC--------------CCCCHHHHHHHHHHHHHHhCCCC-EEEEEeChHHHHHHHHHHhCCcccceEEEEcCCCCC
Q 007536 470 KPN--------------IVYTELMWSELLRDFTVEVVGEP-VHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNV 531 (599)
Q Consensus 470 ~~~--------------~~~~~~~~~~~l~~~l~~l~~~~-~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~~~~ 531 (599)
.+. ..|+++++++++.+++++++.++ ++|+||||||.+++.+|.++|++|+++|++++.+..
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 184 (379)
T PRK00175 108 GPSSINPDTGKPYGSDFPVITIRDWVRAQARLLDALGITRLAAVVGGSMGGMQALEWAIDYPDRVRSALVIASSARL 184 (379)
T ss_pred CCCCCCCCCCCcccCCCCcCCHHHHHHHHHHHHHHhCCCCceEEEEECHHHHHHHHHHHhChHhhhEEEEECCCccc
Confidence 321 15799999999999999999998 599999999999999999999999999999987653
No 41
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.66 E-value=1.3e-15 Score=155.99 Aligned_cols=125 Identities=26% Similarity=0.388 Sum_probs=107.4
Q ss_pred EEEEEECCEEEEEEEcCCC-C--CeEEEECCCCCChHHHHHHHHHHHhCCCEEEEEcCCCCCCCC-CCCCC-CCHHHHHH
Q 007536 408 TRIWRWNGYQIQYTVAGKE-G--PAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSE-KPNIV-YTELMWSE 482 (599)
Q Consensus 408 ~~~~~~~g~~l~y~~~g~~-~--p~vlllHG~~~~~~~w~~~~~~l~~~g~~vi~~D~~G~G~S~-~~~~~-~~~~~~~~ 482 (599)
..+...||..++|..+-.. . .+||++||++.+...|..++..|..+||.|+++|+||||.|. +..+. -+..++.+
T Consensus 12 ~~~~~~d~~~~~~~~~~~~~~~~g~Vvl~HG~~Eh~~ry~~la~~l~~~G~~V~~~D~RGhG~S~r~~rg~~~~f~~~~~ 91 (298)
T COG2267 12 GYFTGADGTRLRYRTWAAPEPPKGVVVLVHGLGEHSGRYEELADDLAARGFDVYALDLRGHGRSPRGQRGHVDSFADYVD 91 (298)
T ss_pred ceeecCCCceEEEEeecCCCCCCcEEEEecCchHHHHHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCcCCchhHHHHHH
Confidence 3567789999999987654 2 579999999999999999999999999999999999999997 44332 24778888
Q ss_pred HHHHHHHHhC----CCCEEEEEeChHHHHHHHHHHhCCcccceEEEEcCCCCCC
Q 007536 483 LLRDFTVEVV----GEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVI 532 (599)
Q Consensus 483 ~l~~~l~~l~----~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~~~~~ 532 (599)
++.++++... ..+++|+||||||.|++.++.+++..|.++|+.+|.....
T Consensus 92 dl~~~~~~~~~~~~~~p~~l~gHSmGg~Ia~~~~~~~~~~i~~~vLssP~~~l~ 145 (298)
T COG2267 92 DLDAFVETIAEPDPGLPVFLLGHSMGGLIALLYLARYPPRIDGLVLSSPALGLG 145 (298)
T ss_pred HHHHHHHHHhccCCCCCeEEEEeCcHHHHHHHHHHhCCccccEEEEECccccCC
Confidence 8888888765 3789999999999999999999999999999999975544
No 42
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.65 E-value=3.2e-15 Score=160.06 Aligned_cols=106 Identities=28% Similarity=0.482 Sum_probs=90.1
Q ss_pred CCCeEEEECCCCCChHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCCC-H----HHHHHHHHHHHHHhCCCCEEEEE
Q 007536 426 EGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNIVYT-E----LMWSELLRDFTVEVVGEPVHLIG 500 (599)
Q Consensus 426 ~~p~vlllHG~~~~~~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~-~----~~~~~~l~~~l~~l~~~~~~lvG 500 (599)
++|+|||+||++++...|...+..|++ +|+|+++|+||||.|+.+...++ . +.+++++.++++.++.++++|+|
T Consensus 104 ~~p~vvllHG~~~~~~~~~~~~~~L~~-~~~vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~~~~lvG 182 (402)
T PLN02894 104 DAPTLVMVHGYGASQGFFFRNFDALAS-RFRVIAIDQLGWGGSSRPDFTCKSTEETEAWFIDSFEEWRKAKNLSNFILLG 182 (402)
T ss_pred CCCEEEEECCCCcchhHHHHHHHHHHh-CCEEEEECCCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHcCCCCeEEEE
Confidence 478999999999999999999999987 49999999999999987643222 1 23456677888888889999999
Q ss_pred eChHHHHHHHHHHhCCcccceEEEEcCCCCCC
Q 007536 501 NSIGGYFVAIVACLWPAVVKSVVLINSAGNVI 532 (599)
Q Consensus 501 hS~Gg~ia~~~a~~~p~~v~~lvli~~~~~~~ 532 (599)
|||||.+|+.+|.++|++|+++|++++.+...
T Consensus 183 hS~GG~la~~~a~~~p~~v~~lvl~~p~~~~~ 214 (402)
T PLN02894 183 HSFGGYVAAKYALKHPEHVQHLILVGPAGFSS 214 (402)
T ss_pred ECHHHHHHHHHHHhCchhhcEEEEECCccccC
Confidence 99999999999999999999999999876543
No 43
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.64 E-value=2.3e-15 Score=159.61 Aligned_cols=120 Identities=31% Similarity=0.393 Sum_probs=107.5
Q ss_pred EEEECCEEEEEEEcCC-CCCeEEEECCCCCChHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 007536 410 IWRWNGYQIQYTVAGK-EGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNIVYTELMWSELLRDFT 488 (599)
Q Consensus 410 ~~~~~g~~l~y~~~g~-~~p~vlllHG~~~~~~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l 488 (599)
.+.+++..++|...|+ ++++|||+||++++...|..++..|... |+|+++|+||||.|.......+...+++++.+++
T Consensus 113 ~~~~~~~~i~~~~~g~~~~~~vl~~HG~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~ 191 (371)
T PRK14875 113 KARIGGRTVRYLRLGEGDGTPVVLIHGFGGDLNNWLFNHAALAAG-RPVIALDLPGHGASSKAVGAGSLDELAAAVLAFL 191 (371)
T ss_pred cceEcCcEEEEecccCCCCCeEEEECCCCCccchHHHHHHHHhcC-CEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHH
Confidence 4556788899988875 3789999999999999999999999874 9999999999999976555778999999999999
Q ss_pred HHhCCCCEEEEEeChHHHHHHHHHHhCCcccceEEEEcCCCC
Q 007536 489 VEVVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGN 530 (599)
Q Consensus 489 ~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~~~ 530 (599)
+.++..+++|+||||||.+++.+|..+|++|.++|++++.+.
T Consensus 192 ~~~~~~~~~lvG~S~Gg~~a~~~a~~~~~~v~~lv~~~~~~~ 233 (371)
T PRK14875 192 DALGIERAHLVGHSMGGAVALRLAARAPQRVASLTLIAPAGL 233 (371)
T ss_pred HhcCCccEEEEeechHHHHHHHHHHhCchheeEEEEECcCCc
Confidence 999989999999999999999999999999999999988643
No 44
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.64 E-value=1.6e-15 Score=149.28 Aligned_cols=103 Identities=25% Similarity=0.342 Sum_probs=91.7
Q ss_pred CCeEEEECCCCCChHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCC--CCCHHHHHHH-HHHHHHHhCCCCEEEEEeCh
Q 007536 427 GPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNI--VYTELMWSEL-LRDFTVEVVGEPVHLIGNSI 503 (599)
Q Consensus 427 ~p~vlllHG~~~~~~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~--~~~~~~~~~~-l~~~l~~l~~~~~~lvGhS~ 503 (599)
+|+|||+||++++...|..+++.|+ .||+|+++|+||||.|+.+.. .++.++++++ +..+++.++.++++++||||
T Consensus 1 ~~~vv~~hG~~~~~~~~~~~~~~L~-~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~ 79 (251)
T TIGR03695 1 KPVLVFLHGFLGSGADWQALIELLG-PHFRCLAIDLPGHGSSQSPDEIERYDFEEAAQDILATLLDQLGIEPFFLVGYSM 79 (251)
T ss_pred CCEEEEEcCCCCchhhHHHHHHHhc-ccCeEEEEcCCCCCCCCCCCccChhhHHHHHHHHHHHHHHHcCCCeEEEEEecc
Confidence 4789999999999999999999998 589999999999999976542 5677788887 77778888888999999999
Q ss_pred HHHHHHHHHHhCCcccceEEEEcCCCC
Q 007536 504 GGYFVAIVACLWPAVVKSVVLINSAGN 530 (599)
Q Consensus 504 Gg~ia~~~a~~~p~~v~~lvli~~~~~ 530 (599)
||.+++.+|.++|+.|+++|++++...
T Consensus 80 Gg~ia~~~a~~~~~~v~~lil~~~~~~ 106 (251)
T TIGR03695 80 GGRIALYYALQYPERVQGLILESGSPG 106 (251)
T ss_pred HHHHHHHHHHhCchheeeeEEecCCCC
Confidence 999999999999999999999998643
No 45
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.63 E-value=5e-15 Score=148.49 Aligned_cols=103 Identities=21% Similarity=0.183 Sum_probs=86.9
Q ss_pred CCeEEEECCCCCC----hHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHH---HHhCCCCEEEE
Q 007536 427 GPAILLVHGFGAF----LEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNIVYTELMWSELLRDFT---VEVVGEPVHLI 499 (599)
Q Consensus 427 ~p~vlllHG~~~~----~~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l---~~l~~~~~~lv 499 (599)
.++|||+||+++. ...|..+++.|+++||+|+++|+||||.|+......+...+.+|+.+++ ++.+..+++|+
T Consensus 25 ~~~VlllHG~g~~~~~~~~~~~~la~~La~~Gy~Vl~~Dl~G~G~S~g~~~~~~~~~~~~Dv~~ai~~L~~~~~~~v~Lv 104 (266)
T TIGR03101 25 RGVVIYLPPFAEEMNKSRRMVALQARAFAAGGFGVLQIDLYGCGDSAGDFAAARWDVWKEDVAAAYRWLIEQGHPPVTLW 104 (266)
T ss_pred ceEEEEECCCcccccchhHHHHHHHHHHHHCCCEEEEECCCCCCCCCCccccCCHHHHHHHHHHHHHHHHhcCCCCEEEE
Confidence 4679999999864 3567888999998999999999999999976555567777888777654 44456899999
Q ss_pred EeChHHHHHHHHHHhCCcccceEEEEcCCC
Q 007536 500 GNSIGGYFVAIVACLWPAVVKSVVLINSAG 529 (599)
Q Consensus 500 GhS~Gg~ia~~~a~~~p~~v~~lvli~~~~ 529 (599)
||||||.+++.+|.++|+++.++|+++|..
T Consensus 105 G~SmGG~vAl~~A~~~p~~v~~lVL~~P~~ 134 (266)
T TIGR03101 105 GLRLGALLALDAANPLAAKCNRLVLWQPVV 134 (266)
T ss_pred EECHHHHHHHHHHHhCccccceEEEecccc
Confidence 999999999999999999999999999853
No 46
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.62 E-value=2e-15 Score=148.51 Aligned_cols=98 Identities=22% Similarity=0.309 Sum_probs=84.8
Q ss_pred CCeEEEECCCCCChHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCEEEEEeChHHH
Q 007536 427 GPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNIVYTELMWSELLRDFTVEVVGEPVHLIGNSIGGY 506 (599)
Q Consensus 427 ~p~vlllHG~~~~~~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~lvGhS~Gg~ 506 (599)
.|+|||+||++++...|..+++.|.+ +|+|+++|+||||.|+... .++.+++++++.+.+ .++++++||||||.
T Consensus 4 ~~~iv~~HG~~~~~~~~~~~~~~l~~-~~~vi~~d~~G~G~s~~~~-~~~~~~~~~~~~~~~----~~~~~lvG~S~Gg~ 77 (245)
T TIGR01738 4 NVHLVLIHGWGMNAEVFRCLDEELSA-HFTLHLVDLPGHGRSRGFG-PLSLADAAEAIAAQA----PDPAIWLGWSLGGL 77 (245)
T ss_pred CceEEEEcCCCCchhhHHHHHHhhcc-CeEEEEecCCcCccCCCCC-CcCHHHHHHHHHHhC----CCCeEEEEEcHHHH
Confidence 48999999999999999999999986 5999999999999997543 467777776665443 37999999999999
Q ss_pred HHHHHHHhCCcccceEEEEcCCCC
Q 007536 507 FVAIVACLWPAVVKSVVLINSAGN 530 (599)
Q Consensus 507 ia~~~a~~~p~~v~~lvli~~~~~ 530 (599)
+++.+|.++|++|+++|++++...
T Consensus 78 ~a~~~a~~~p~~v~~~il~~~~~~ 101 (245)
T TIGR01738 78 VALHIAATHPDRVRALVTVASSPC 101 (245)
T ss_pred HHHHHHHHCHHhhheeeEecCCcc
Confidence 999999999999999999988654
No 47
>PRK05855 short chain dehydrogenase; Validated
Probab=99.59 E-value=1.3e-14 Score=163.14 Aligned_cols=119 Identities=22% Similarity=0.239 Sum_probs=101.0
Q ss_pred EEEEEECCEEEEEEEcCCC-CCeEEEECCCCCChHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCC--CCCCHHHHHHHH
Q 007536 408 TRIWRWNGYQIQYTVAGKE-GPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPN--IVYTELMWSELL 484 (599)
Q Consensus 408 ~~~~~~~g~~l~y~~~g~~-~p~vlllHG~~~~~~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~--~~~~~~~~~~~l 484 (599)
..++..+|.+|+|...|+. +|+|||+||++++...|.++++.|.+ ||+|+++|+||||.|+.+. ..++.+.+++++
T Consensus 5 ~~~~~~~g~~l~~~~~g~~~~~~ivllHG~~~~~~~w~~~~~~L~~-~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~a~dl 83 (582)
T PRK05855 5 RTVVSSDGVRLAVYEWGDPDRPTVVLVHGYPDNHEVWDGVAPLLAD-RFRVVAYDVRGAGRSSAPKRTAAYTLARLADDF 83 (582)
T ss_pred EEEEeeCCEEEEEEEcCCCCCCeEEEEcCCCchHHHHHHHHHHhhc-ceEEEEecCCCCCCCCCCCcccccCHHHHHHHH
Confidence 4567789999999998864 78999999999999999999999954 7999999999999998643 368899999999
Q ss_pred HHHHHHhCCCC-EEEEEeChHHHHHHHHHHh--CCcccceEEEEcC
Q 007536 485 RDFTVEVVGEP-VHLIGNSIGGYFVAIVACL--WPAVVKSVVLINS 527 (599)
Q Consensus 485 ~~~l~~l~~~~-~~lvGhS~Gg~ia~~~a~~--~p~~v~~lvli~~ 527 (599)
.++++.++..+ ++|+||||||.+++.++.. +++++..++.+++
T Consensus 84 ~~~i~~l~~~~~~~lvGhS~Gg~~a~~~a~~~~~~~~v~~~~~~~~ 129 (582)
T PRK05855 84 AAVIDAVSPDRPVHLLAHDWGSIQGWEAVTRPRAAGRIASFTSVSG 129 (582)
T ss_pred HHHHHHhCCCCcEEEEecChHHHHHHHHHhCccchhhhhhheeccC
Confidence 99999998755 9999999999999888776 3455666665554
No 48
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.57 E-value=3e-14 Score=151.67 Aligned_cols=119 Identities=20% Similarity=0.273 Sum_probs=97.6
Q ss_pred EEECCEEEEEEEcCCC----CCeEEEECCCCCChHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCC-CCCHHHHHHHHH
Q 007536 411 WRWNGYQIQYTVAGKE----GPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNI-VYTELMWSELLR 485 (599)
Q Consensus 411 ~~~~g~~l~y~~~g~~----~p~vlllHG~~~~~~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~-~~~~~~~~~~l~ 485 (599)
..-++..++|..+.+. .++|||+||++++...|..+++.|+++||+|+++|+||||.|+.... ..+.+.+.+++.
T Consensus 116 ~~~~~~~l~~~~~~p~~~~~~~~Vl~lHG~~~~~~~~~~~a~~L~~~Gy~V~~~D~rGhG~S~~~~~~~~~~~~~~~Dl~ 195 (395)
T PLN02652 116 YGARRNALFCRSWAPAAGEMRGILIIIHGLNEHSGRYLHFAKQLTSCGFGVYAMDWIGHGGSDGLHGYVPSLDYVVEDTE 195 (395)
T ss_pred ECCCCCEEEEEEecCCCCCCceEEEEECCchHHHHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCcCHHHHHHHHH
Confidence 3446678888876542 46899999999999999999999998899999999999999987543 346777888888
Q ss_pred HHHHHhCC----CCEEEEEeChHHHHHHHHHHhCCc---ccceEEEEcCCCC
Q 007536 486 DFTVEVVG----EPVHLIGNSIGGYFVAIVACLWPA---VVKSVVLINSAGN 530 (599)
Q Consensus 486 ~~l~~l~~----~~~~lvGhS~Gg~ia~~~a~~~p~---~v~~lvli~~~~~ 530 (599)
++++.+.. .+++|+||||||.+++.++. +|+ +|+++|+.+|...
T Consensus 196 ~~l~~l~~~~~~~~i~lvGhSmGG~ial~~a~-~p~~~~~v~glVL~sP~l~ 246 (395)
T PLN02652 196 AFLEKIRSENPGVPCFLFGHSTGGAVVLKAAS-YPSIEDKLEGIVLTSPALR 246 (395)
T ss_pred HHHHHHHHhCCCCCEEEEEECHHHHHHHHHHh-ccCcccccceEEEECcccc
Confidence 88887653 47999999999999987764 664 8999999988643
No 49
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.55 E-value=5.6e-14 Score=138.21 Aligned_cols=126 Identities=21% Similarity=0.273 Sum_probs=104.2
Q ss_pred EEEECCEEEEEEEcCCC-----CCeEEEECCCCCCh-HHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCC-CCCHHHHHH
Q 007536 410 IWRWNGYQIQYTVAGKE-----GPAILLVHGFGAFL-EHYRDNIYDIADGGNRVWAITLLGFGRSEKPNI-VYTELMWSE 482 (599)
Q Consensus 410 ~~~~~g~~l~y~~~g~~-----~p~vlllHG~~~~~-~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~-~~~~~~~~~ 482 (599)
+.+.+|..+++..+-+. .-.|+++||++... ..+..++..|+..||.|+++|++|||.|++... ..+.+..++
T Consensus 32 ~~n~rG~~lft~~W~p~~~~~pr~lv~~~HG~g~~~s~~~~~~a~~l~~~g~~v~a~D~~GhG~SdGl~~yi~~~d~~v~ 111 (313)
T KOG1455|consen 32 FTNPRGAKLFTQSWLPLSGTEPRGLVFLCHGYGEHSSWRYQSTAKRLAKSGFAVYAIDYEGHGRSDGLHAYVPSFDLVVD 111 (313)
T ss_pred EEcCCCCEeEEEecccCCCCCCceEEEEEcCCcccchhhHHHHHHHHHhCCCeEEEeeccCCCcCCCCcccCCcHHHHHH
Confidence 44567889999887652 22588999998875 778889999999999999999999999997543 346778888
Q ss_pred HHHHHHHHhC------CCCEEEEEeChHHHHHHHHHHhCCcccceEEEEcCCCCCCCcc
Q 007536 483 LLRDFTVEVV------GEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIPEY 535 (599)
Q Consensus 483 ~l~~~l~~l~------~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~~~~~~~~ 535 (599)
|+..+.+... ..+.+|.||||||+|++.++.++|+...|+|+++|.....+..
T Consensus 112 D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~~w~G~ilvaPmc~i~~~~ 170 (313)
T KOG1455|consen 112 DVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDPNFWDGAILVAPMCKISEDT 170 (313)
T ss_pred HHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhCCcccccceeeecccccCCcc
Confidence 8888877532 3589999999999999999999999999999999987665543
No 50
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.54 E-value=6.6e-14 Score=172.22 Aligned_cols=112 Identities=24% Similarity=0.369 Sum_probs=99.0
Q ss_pred EEEEEcCC--CCCeEEEECCCCCChHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCC--------CCCCHHHHHHHHHHH
Q 007536 418 IQYTVAGK--EGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPN--------IVYTELMWSELLRDF 487 (599)
Q Consensus 418 l~y~~~g~--~~p~vlllHG~~~~~~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~--------~~~~~~~~~~~l~~~ 487 (599)
++|...|. .+++|||+||++++...|..++..|.+ +|+|+++|+||||.|+.+. ..++++.+++++.++
T Consensus 1360 i~~~~~G~~~~~~~vVllHG~~~s~~~w~~~~~~L~~-~~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~si~~~a~~l~~l 1438 (1655)
T PLN02980 1360 IKVHEVGQNAEGSVVLFLHGFLGTGEDWIPIMKAISG-SARCISIDLPGHGGSKIQNHAKETQTEPTLSVELVADLLYKL 1438 (1655)
T ss_pred EEEEecCCCCCCCeEEEECCCCCCHHHHHHHHHHHhC-CCEEEEEcCCCCCCCCCccccccccccccCCHHHHHHHHHHH
Confidence 55666664 368999999999999999999999987 4999999999999997532 257899999999999
Q ss_pred HHHhCCCCEEEEEeChHHHHHHHHHHhCCcccceEEEEcCCCC
Q 007536 488 TVEVVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGN 530 (599)
Q Consensus 488 l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~~~ 530 (599)
+++++.++++|+||||||.+++.++.++|++|+++|++++.+.
T Consensus 1439 l~~l~~~~v~LvGhSmGG~iAl~~A~~~P~~V~~lVlis~~p~ 1481 (1655)
T PLN02980 1439 IEHITPGKVTLVGYSMGARIALYMALRFSDKIEGAVIISGSPG 1481 (1655)
T ss_pred HHHhCCCCEEEEEECHHHHHHHHHHHhChHhhCEEEEECCCCc
Confidence 9999999999999999999999999999999999999987543
No 51
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.53 E-value=4.4e-14 Score=146.30 Aligned_cols=107 Identities=38% Similarity=0.567 Sum_probs=94.0
Q ss_pred CCCeEEEECCCCCChHHHHHHHHHHHhC-CCEEEEEcCCCCCCCC-CCCC-CCCHHHHHHHHHHHHHHhCCCCEEEEEeC
Q 007536 426 EGPAILLVHGFGAFLEHYRDNIYDIADG-GNRVWAITLLGFGRSE-KPNI-VYTELMWSELLRDFTVEVVGEPVHLIGNS 502 (599)
Q Consensus 426 ~~p~vlllHG~~~~~~~w~~~~~~l~~~-g~~vi~~D~~G~G~S~-~~~~-~~~~~~~~~~l~~~l~~l~~~~~~lvGhS 502 (599)
++++||++|||+++...|+.++..|.++ |+.|+++|++|+|+|+ .+.+ .|+...+.+.+..++.+....+++++|||
T Consensus 57 ~~~pvlllHGF~~~~~~w~~~~~~L~~~~~~~v~aiDl~G~g~~s~~~~~~~y~~~~~v~~i~~~~~~~~~~~~~lvghS 136 (326)
T KOG1454|consen 57 DKPPVLLLHGFGASSFSWRRVVPLLSKAKGLRVLAIDLPGHGYSSPLPRGPLYTLRELVELIRRFVKEVFVEPVSLVGHS 136 (326)
T ss_pred CCCcEEEeccccCCcccHhhhccccccccceEEEEEecCCCCcCCCCCCCCceehhHHHHHHHHHHHhhcCcceEEEEeC
Confidence 4789999999999999999999999876 5999999999999554 3333 58999999999999999999999999999
Q ss_pred hHHHHHHHHHHhCCcccceEE---EEcCCCCCC
Q 007536 503 IGGYFVAIVACLWPAVVKSVV---LINSAGNVI 532 (599)
Q Consensus 503 ~Gg~ia~~~a~~~p~~v~~lv---li~~~~~~~ 532 (599)
|||.+|+.+|+.+|+.|+++| +++++....
T Consensus 137 ~Gg~va~~~Aa~~P~~V~~lv~~~~~~~~~~~~ 169 (326)
T KOG1454|consen 137 LGGIVALKAAAYYPETVDSLVLLDLLGPPVYST 169 (326)
T ss_pred cHHHHHHHHHHhCcccccceeeecccccccccC
Confidence 999999999999999999999 555554443
No 52
>PLN02511 hydrolase
Probab=99.49 E-value=2e-13 Score=145.56 Aligned_cols=104 Identities=17% Similarity=0.189 Sum_probs=81.4
Q ss_pred CCCeEEEECCCCCChH-HH-HHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC----CCEEEE
Q 007536 426 EGPAILLVHGFGAFLE-HY-RDNIYDIADGGNRVWAITLLGFGRSEKPNIVYTELMWSELLRDFTVEVVG----EPVHLI 499 (599)
Q Consensus 426 ~~p~vlllHG~~~~~~-~w-~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~----~~~~lv 499 (599)
.+|+||++||+++++. .| ..++..+.+.||+|+++|+||||.|......+....+.+|+.++++.+.. .+++++
T Consensus 99 ~~p~vvllHG~~g~s~~~y~~~~~~~~~~~g~~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~~~lv 178 (388)
T PLN02511 99 DAPVLILLPGLTGGSDDSYVRHMLLRARSKGWRVVVFNSRGCADSPVTTPQFYSASFTGDLRQVVDHVAGRYPSANLYAA 178 (388)
T ss_pred CCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEecCCCCCCCCCCcCEEcCCchHHHHHHHHHHHHHCCCCCEEEE
Confidence 4788999999977653 34 56777777789999999999999997543322234556677777766654 689999
Q ss_pred EeChHHHHHHHHHHhCCcc--cceEEEEcCCC
Q 007536 500 GNSIGGYFVAIVACLWPAV--VKSVVLINSAG 529 (599)
Q Consensus 500 GhS~Gg~ia~~~a~~~p~~--v~~lvli~~~~ 529 (599)
||||||.+++.++.++|++ |.++++++++.
T Consensus 179 G~SlGg~i~~~yl~~~~~~~~v~~~v~is~p~ 210 (388)
T PLN02511 179 GWSLGANILVNYLGEEGENCPLSGAVSLCNPF 210 (388)
T ss_pred EechhHHHHHHHHHhcCCCCCceEEEEECCCc
Confidence 9999999999999999987 88999887653
No 53
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=99.47 E-value=7.5e-14 Score=128.36 Aligned_cols=189 Identities=20% Similarity=0.185 Sum_probs=130.7
Q ss_pred eeEEEEEECCEEEEEEEcCCCCCeEEEECCCCC-ChHHHHHHHHHHHhC-CCEEEEEcCCCCCCCCCCCCCCCHHHHH--
Q 007536 406 YSTRIWRWNGYQIQYTVAGKEGPAILLVHGFGA-FLEHYRDNIYDIADG-GNRVWAITLLGFGRSEKPNIVYTELMWS-- 481 (599)
Q Consensus 406 ~~~~~~~~~g~~l~y~~~g~~~p~vlllHG~~~-~~~~w~~~~~~l~~~-g~~vi~~D~~G~G~S~~~~~~~~~~~~~-- 481 (599)
++.+.+.++|.+|.|...|.....||+++|.-+ .+..|.+++..|-+. .++++++|.||+|.|.+|...+..+.+.
T Consensus 21 ~te~kv~vng~ql~y~~~G~G~~~iLlipGalGs~~tDf~pql~~l~k~l~~TivawDPpGYG~SrPP~Rkf~~~ff~~D 100 (277)
T KOG2984|consen 21 YTESKVHVNGTQLGYCKYGHGPNYILLIPGALGSYKTDFPPQLLSLFKPLQVTIVAWDPPGYGTSRPPERKFEVQFFMKD 100 (277)
T ss_pred hhhheeeecCceeeeeecCCCCceeEecccccccccccCCHHHHhcCCCCceEEEEECCCCCCCCCCCcccchHHHHHHh
Confidence 344578899999999999965668999999755 567899988887654 3999999999999999887766666554
Q ss_pred -HHHHHHHHHhCCCCEEEEEeChHHHHHHHHHHhCCcccceEEEEcCCCCCCCcchhhhhhhhhhhcChhhHHHHHHHHH
Q 007536 482 -ELLRDFTVEVVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIPEYSFLQFSNERQASGPIRLGAQLLLFY 560 (599)
Q Consensus 482 -~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 560 (599)
++..++++++..+++.|+|+|-||..|+..|+++++.|.++|+.+++..............+....|..+...+....+
T Consensus 101 a~~avdLM~aLk~~~fsvlGWSdGgiTalivAak~~e~v~rmiiwga~ayvn~~~~ma~kgiRdv~kWs~r~R~P~e~~Y 180 (277)
T KOG2984|consen 101 AEYAVDLMEALKLEPFSVLGWSDGGITALIVAAKGKEKVNRMIIWGAAAYVNHLGAMAFKGIRDVNKWSARGRQPYEDHY 180 (277)
T ss_pred HHHHHHHHHHhCCCCeeEeeecCCCeEEEEeeccChhhhhhheeecccceecchhHHHHhchHHHhhhhhhhcchHHHhc
Confidence 4555678889999999999999999999999999999999999998766443222211112222333333333222221
Q ss_pred H----HHHHHH---HHHhhCCCCCcccCHHHHHHHHHhhcCcccc
Q 007536 561 L----RLNISN---FVKQCYPTRRERADDWLISEMLRAVSSSIFI 598 (599)
Q Consensus 561 ~----~~~~~~---~l~~~~~~~~~~~~~~l~~~~~~~~~~~~fi 598 (599)
- +..... .+.+++. .-+...++.....+.+|+||
T Consensus 181 g~e~f~~~wa~wvD~v~qf~~----~~dG~fCr~~lp~vkcPtli 221 (277)
T KOG2984|consen 181 GPETFRTQWAAWVDVVDQFHS----FCDGRFCRLVLPQVKCPTLI 221 (277)
T ss_pred CHHHHHHHHHHHHHHHHHHhh----cCCCchHhhhcccccCCeeE
Confidence 1 111111 2233333 22344577777777888876
No 54
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=99.47 E-value=5.3e-13 Score=141.64 Aligned_cols=108 Identities=18% Similarity=0.239 Sum_probs=85.5
Q ss_pred cCCCCCeEEEECCCCCCh--HHHHH-HHHHHHh--CCCEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh------
Q 007536 423 AGKEGPAILLVHGFGAFL--EHYRD-NIYDIAD--GGNRVWAITLLGFGRSEKPNIVYTELMWSELLRDFTVEV------ 491 (599)
Q Consensus 423 ~g~~~p~vlllHG~~~~~--~~w~~-~~~~l~~--~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l------ 491 (599)
+.+.+|++|+|||++++. ..|.. +++.|.. .+|+||++|++|+|.|..+........+++++.++++.+
T Consensus 37 Fn~~~ptvIlIHG~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~y~~a~~~t~~vg~~la~lI~~L~~~~gl 116 (442)
T TIGR03230 37 FNHETKTFIVIHGWTVTGMFESWVPKLVAALYEREPSANVIVVDWLSRAQQHYPTSAAYTKLVGKDVAKFVNWMQEEFNY 116 (442)
T ss_pred cCCCCCeEEEECCCCcCCcchhhHHHHHHHHHhccCCCEEEEEECCCcCCCCCccccccHHHHHHHHHHHHHHHHHhhCC
Confidence 444589999999998653 56765 5555542 259999999999999876644334466677777777754
Q ss_pred CCCCEEEEEeChHHHHHHHHHHhCCcccceEEEEcCCCC
Q 007536 492 VGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGN 530 (599)
Q Consensus 492 ~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~~~ 530 (599)
..++++||||||||.+|..++..+|++|.++++++|+++
T Consensus 117 ~l~~VhLIGHSLGAhIAg~ag~~~p~rV~rItgLDPAgP 155 (442)
T TIGR03230 117 PWDNVHLLGYSLGAHVAGIAGSLTKHKVNRITGLDPAGP 155 (442)
T ss_pred CCCcEEEEEECHHHHHHHHHHHhCCcceeEEEEEcCCCC
Confidence 358999999999999999999999999999999999865
No 55
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=99.46 E-value=3.4e-13 Score=130.24 Aligned_cols=102 Identities=25% Similarity=0.372 Sum_probs=88.0
Q ss_pred CCCeEEEECCCCCChHHHHHHHHHHHhC-CCEEEEEcCCCCCCCCCCC-CCCCHHHHHHHHHHHHHHhCC---CCEEEEE
Q 007536 426 EGPAILLVHGFGAFLEHYRDNIYDIADG-GNRVWAITLLGFGRSEKPN-IVYTELMWSELLRDFTVEVVG---EPVHLIG 500 (599)
Q Consensus 426 ~~p~vlllHG~~~~~~~w~~~~~~l~~~-g~~vi~~D~~G~G~S~~~~-~~~~~~~~~~~l~~~l~~l~~---~~~~lvG 500 (599)
.+|.++++||+|.+.-.|..++..|... ..+|+++|+||||.|...+ ...+.+.++.|+.+++..+-. .+++|||
T Consensus 73 ~gpil~l~HG~G~S~LSfA~~a~el~s~~~~r~~a~DlRgHGeTk~~~e~dlS~eT~~KD~~~~i~~~fge~~~~iilVG 152 (343)
T KOG2564|consen 73 EGPILLLLHGGGSSALSFAIFASELKSKIRCRCLALDLRGHGETKVENEDDLSLETMSKDFGAVIKELFGELPPQIILVG 152 (343)
T ss_pred CccEEEEeecCcccchhHHHHHHHHHhhcceeEEEeeccccCccccCChhhcCHHHHHHHHHHHHHHHhccCCCceEEEe
Confidence 4899999999999999999999988754 5889999999999997533 468999999999999998864 6799999
Q ss_pred eChHHHHHHHHHHh--CCcccceEEEEcCC
Q 007536 501 NSIGGYFVAIVACL--WPAVVKSVVLINSA 528 (599)
Q Consensus 501 hS~Gg~ia~~~a~~--~p~~v~~lvli~~~ 528 (599)
|||||.||.+.|.. -|. +.|+++|+-.
T Consensus 153 HSmGGaIav~~a~~k~lps-l~Gl~viDVV 181 (343)
T KOG2564|consen 153 HSMGGAIAVHTAASKTLPS-LAGLVVIDVV 181 (343)
T ss_pred ccccchhhhhhhhhhhchh-hhceEEEEEe
Confidence 99999999888764 465 9999999874
No 56
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.46 E-value=3.7e-13 Score=140.62 Aligned_cols=116 Identities=18% Similarity=0.213 Sum_probs=91.0
Q ss_pred ECCEEEEEEEcCCC--CCeEEEECCCCCChH-HH-------------------------HHHHHHHHhCCCEEEEEcCCC
Q 007536 413 WNGYQIQYTVAGKE--GPAILLVHGFGAFLE-HY-------------------------RDNIYDIADGGNRVWAITLLG 464 (599)
Q Consensus 413 ~~g~~l~y~~~g~~--~p~vlllHG~~~~~~-~w-------------------------~~~~~~l~~~g~~vi~~D~~G 464 (599)
.||..|++..+.++ +.+||++||++++.. .+ ..+++.|.++||+|+++|+||
T Consensus 5 ~~g~~l~~~~~~~~~~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~~G~~V~~~D~rG 84 (332)
T TIGR01607 5 KDGLLLKTYSWIVKNAIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNKNGYSVYGLDLQG 84 (332)
T ss_pred CCCCeEEEeeeeccCCeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHHCCCcEEEecccc
Confidence 47888888776543 457999999999875 21 357899999999999999999
Q ss_pred CCCCCCCCC--C--CCHHHHHHHHHHHHHHhC------------------------CCCEEEEEeChHHHHHHHHHHhCC
Q 007536 465 FGRSEKPNI--V--YTELMWSELLRDFTVEVV------------------------GEPVHLIGNSIGGYFVAIVACLWP 516 (599)
Q Consensus 465 ~G~S~~~~~--~--~~~~~~~~~l~~~l~~l~------------------------~~~~~lvGhS~Gg~ia~~~a~~~p 516 (599)
||.|+.... . .+.+++++|+.++++... ..|++|+||||||.+++.++..++
T Consensus 85 HG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~~~~~~~~~ 164 (332)
T TIGR01607 85 HGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIALRLLELLG 164 (332)
T ss_pred cCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHHHHHHHHhc
Confidence 999985321 1 367778888888877531 357999999999999999987654
Q ss_pred c--------ccceEEEEcCC
Q 007536 517 A--------VVKSVVLINSA 528 (599)
Q Consensus 517 ~--------~v~~lvli~~~ 528 (599)
+ .++|+|++++.
T Consensus 165 ~~~~~~~~~~i~g~i~~s~~ 184 (332)
T TIGR01607 165 KSNENNDKLNIKGCISLSGM 184 (332)
T ss_pred cccccccccccceEEEeccc
Confidence 2 58999988876
No 57
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.45 E-value=4e-13 Score=126.05 Aligned_cols=103 Identities=26% Similarity=0.331 Sum_probs=90.3
Q ss_pred CCeEEEECCCCCChHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh---CCCCEEEEEeCh
Q 007536 427 GPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNIVYTELMWSELLRDFTVEV---VGEPVHLIGNSI 503 (599)
Q Consensus 427 ~p~vlllHG~~~~~~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l---~~~~~~lvGhS~ 503 (599)
+.+||||||+.|+....+.+.+.|.++||+|.+|.+||||.....--..+..+|-+++.+..+.+ +-+.|.++|.||
T Consensus 15 ~~AVLllHGFTGt~~Dvr~Lgr~L~e~GyTv~aP~ypGHG~~~e~fl~t~~~DW~~~v~d~Y~~L~~~gy~eI~v~GlSm 94 (243)
T COG1647 15 NRAVLLLHGFTGTPRDVRMLGRYLNENGYTVYAPRYPGHGTLPEDFLKTTPRDWWEDVEDGYRDLKEAGYDEIAVVGLSM 94 (243)
T ss_pred CEEEEEEeccCCCcHHHHHHHHHHHHCCceEecCCCCCCCCCHHHHhcCCHHHHHHHHHHHHHHHHHcCCCeEEEEeecc
Confidence 47899999999999999999999999999999999999998753334668889988888776655 458999999999
Q ss_pred HHHHHHHHHHhCCcccceEEEEcCCCCC
Q 007536 504 GGYFVAIVACLWPAVVKSVVLINSAGNV 531 (599)
Q Consensus 504 Gg~ia~~~a~~~p~~v~~lvli~~~~~~ 531 (599)
||.+++.+|..+| ++++|.++++...
T Consensus 95 GGv~alkla~~~p--~K~iv~m~a~~~~ 120 (243)
T COG1647 95 GGVFALKLAYHYP--PKKIVPMCAPVNV 120 (243)
T ss_pred hhHHHHHHHhhCC--ccceeeecCCccc
Confidence 9999999999998 9999999997553
No 58
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.43 E-value=3.5e-12 Score=129.75 Aligned_cols=101 Identities=17% Similarity=0.036 Sum_probs=81.2
Q ss_pred CCCeEEEECCCCC----ChHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh-----CCCCE
Q 007536 426 EGPAILLVHGFGA----FLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNIVYTELMWSELLRDFTVEV-----VGEPV 496 (599)
Q Consensus 426 ~~p~vlllHG~~~----~~~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l-----~~~~~ 496 (599)
++++||++||+++ +...|..+++.|+++||+|+++|++|||.|.... .+.+.+.+++.++++.+ +.+++
T Consensus 25 ~~~~vv~i~gg~~~~~g~~~~~~~la~~l~~~G~~v~~~Dl~G~G~S~~~~--~~~~~~~~d~~~~~~~l~~~~~g~~~i 102 (274)
T TIGR03100 25 HTTGVLIVVGGPQYRVGSHRQFVLLARRLAEAGFPVLRFDYRGMGDSEGEN--LGFEGIDADIAAAIDAFREAAPHLRRI 102 (274)
T ss_pred CCCeEEEEeCCccccCCchhHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCC--CCHHHHHHHHHHHHHHHHhhCCCCCcE
Confidence 3568888888753 4455777899999999999999999999997542 46667777777777765 44779
Q ss_pred EEEEeChHHHHHHHHHHhCCcccceEEEEcCCC
Q 007536 497 HLIGNSIGGYFVAIVACLWPAVVKSVVLINSAG 529 (599)
Q Consensus 497 ~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~~ 529 (599)
+++||||||.+++.+|.. +++|+++|++++..
T Consensus 103 ~l~G~S~Gg~~a~~~a~~-~~~v~~lil~~p~~ 134 (274)
T TIGR03100 103 VAWGLCDAASAALLYAPA-DLRVAGLVLLNPWV 134 (274)
T ss_pred EEEEECHHHHHHHHHhhh-CCCccEEEEECCcc
Confidence 999999999999998765 46899999999863
No 59
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=99.42 E-value=4.3e-13 Score=136.11 Aligned_cols=117 Identities=17% Similarity=0.197 Sum_probs=87.4
Q ss_pred CEEEEEEEcCCCCCeEEEECCCCCCh-HHHHHH-HHHHH-hCCCEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh
Q 007536 415 GYQIQYTVAGKEGPAILLVHGFGAFL-EHYRDN-IYDIA-DGGNRVWAITLLGFGRSEKPNIVYTELMWSELLRDFTVEV 491 (599)
Q Consensus 415 g~~l~y~~~g~~~p~vlllHG~~~~~-~~w~~~-~~~l~-~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l 491 (599)
+..+.+....+.+|++|+|||++++. ..|... ...+. ..+++|+++|++|++.+..+....+...+++++.++++.+
T Consensus 24 ~~~~~~~~f~~~~p~vilIHG~~~~~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~y~~a~~~~~~v~~~la~~l~~L 103 (275)
T cd00707 24 PSSLKNSNFNPSRPTRFIIHGWTSSGEESWISDLRKAYLSRGDYNVIVVDWGRGANPNYPQAVNNTRVVGAELAKFLDFL 103 (275)
T ss_pred hhhhhhcCCCCCCCcEEEEcCCCCCCCCcHHHHHHHHHHhcCCCEEEEEECccccccChHHHHHhHHHHHHHHHHHHHHH
Confidence 45566666676789999999999887 677654 44444 4579999999999854433222334445555566655543
Q ss_pred ------CCCCEEEEEeChHHHHHHHHHHhCCcccceEEEEcCCCCC
Q 007536 492 ------VGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNV 531 (599)
Q Consensus 492 ------~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~~~~ 531 (599)
..++++||||||||.+|..++..+|++|.++++++|++..
T Consensus 104 ~~~~g~~~~~i~lIGhSlGa~vAg~~a~~~~~~v~~iv~LDPa~p~ 149 (275)
T cd00707 104 VDNTGLSLENVHLIGHSLGAHVAGFAGKRLNGKLGRITGLDPAGPL 149 (275)
T ss_pred HHhcCCChHHEEEEEecHHHHHHHHHHHHhcCccceeEEecCCccc
Confidence 3478999999999999999999999999999999997543
No 60
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.41 E-value=3.7e-12 Score=136.69 Aligned_cols=103 Identities=19% Similarity=0.202 Sum_probs=80.2
Q ss_pred CCeEEEECCCCCCh-HHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh---CCCCEEEEEeC
Q 007536 427 GPAILLVHGFGAFL-EHYRDNIYDIADGGNRVWAITLLGFGRSEKPNIVYTELMWSELLRDFTVEV---VGEPVHLIGNS 502 (599)
Q Consensus 427 ~p~vlllHG~~~~~-~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l---~~~~~~lvGhS 502 (599)
.|+||++||+++.. ..|..+++.|+++||+|+++|+||+|.|.......+.......+.+++... ..+++.++|||
T Consensus 194 ~P~Vli~gG~~~~~~~~~~~~~~~La~~Gy~vl~~D~pG~G~s~~~~~~~d~~~~~~avld~l~~~~~vd~~ri~l~G~S 273 (414)
T PRK05077 194 FPTVLVCGGLDSLQTDYYRLFRDYLAPRGIAMLTIDMPSVGFSSKWKLTQDSSLLHQAVLNALPNVPWVDHTRVAAFGFR 273 (414)
T ss_pred ccEEEEeCCcccchhhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCCccccHHHHHHHHHHHHHhCcccCcccEEEEEEC
Confidence 45666666666553 578888999999999999999999999965322233444445555555554 44789999999
Q ss_pred hHHHHHHHHHHhCCcccceEEEEcCCC
Q 007536 503 IGGYFVAIVACLWPAVVKSVVLINSAG 529 (599)
Q Consensus 503 ~Gg~ia~~~a~~~p~~v~~lvli~~~~ 529 (599)
|||.+|+.+|..+|++|+++|++++..
T Consensus 274 ~GG~~Al~~A~~~p~ri~a~V~~~~~~ 300 (414)
T PRK05077 274 FGANVAVRLAYLEPPRLKAVACLGPVV 300 (414)
T ss_pred hHHHHHHHHHHhCCcCceEEEEECCcc
Confidence 999999999999999999999998864
No 61
>PRK13604 luxD acyl transferase; Provisional
Probab=99.39 E-value=4.7e-12 Score=128.07 Aligned_cols=116 Identities=17% Similarity=0.085 Sum_probs=86.2
Q ss_pred ECCEEEEEEEcCC------CCCeEEEECCCCCChHHHHHHHHHHHhCCCEEEEEcCCCC-CCCCCCCCCCCHHHHHHHHH
Q 007536 413 WNGYQIQYTVAGK------EGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGF-GRSEKPNIVYTELMWSELLR 485 (599)
Q Consensus 413 ~~g~~l~y~~~g~------~~p~vlllHG~~~~~~~w~~~~~~l~~~g~~vi~~D~~G~-G~S~~~~~~~~~~~~~~~l~ 485 (599)
-+|..|.-...-+ +.++||++||++++...+..+++.|+++||.|+.+|.+|+ |.|++.....+......|+.
T Consensus 17 ~dG~~L~Gwl~~P~~~~~~~~~~vIi~HGf~~~~~~~~~~A~~La~~G~~vLrfD~rg~~GeS~G~~~~~t~s~g~~Dl~ 96 (307)
T PRK13604 17 ENGQSIRVWETLPKENSPKKNNTILIASGFARRMDHFAGLAEYLSSNGFHVIRYDSLHHVGLSSGTIDEFTMSIGKNSLL 96 (307)
T ss_pred CCCCEEEEEEEcCcccCCCCCCEEEEeCCCCCChHHHHHHHHHHHHCCCEEEEecCCCCCCCCCCccccCcccccHHHHH
Confidence 3677776554333 1368999999999988899999999999999999999987 99976443333333345554
Q ss_pred HHH---HHhCCCCEEEEEeChHHHHHHHHHHhCCcccceEEEEcCCCC
Q 007536 486 DFT---VEVVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGN 530 (599)
Q Consensus 486 ~~l---~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~~~ 530 (599)
.++ .....+++.|+||||||.+|+..|... .++++|+.+|...
T Consensus 97 aaid~lk~~~~~~I~LiG~SmGgava~~~A~~~--~v~~lI~~sp~~~ 142 (307)
T PRK13604 97 TVVDWLNTRGINNLGLIAASLSARIAYEVINEI--DLSFLITAVGVVN 142 (307)
T ss_pred HHHHHHHhcCCCceEEEEECHHHHHHHHHhcCC--CCCEEEEcCCccc
Confidence 444 344557899999999999997776643 3999999888654
No 62
>PRK11071 esterase YqiA; Provisional
Probab=99.38 E-value=2.7e-12 Score=123.07 Aligned_cols=89 Identities=24% Similarity=0.371 Sum_probs=75.6
Q ss_pred CeEEEECCCCCChHHHHH--HHHHHHhC--CCEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCEEEEEeCh
Q 007536 428 PAILLVHGFGAFLEHYRD--NIYDIADG--GNRVWAITLLGFGRSEKPNIVYTELMWSELLRDFTVEVVGEPVHLIGNSI 503 (599)
Q Consensus 428 p~vlllHG~~~~~~~w~~--~~~~l~~~--g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~lvGhS~ 503 (599)
|+|||+||++++...|.. +.+.+.+. +|+|+++|+|||| +.+++++.+++++++.++++++||||
T Consensus 2 p~illlHGf~ss~~~~~~~~~~~~l~~~~~~~~v~~~dl~g~~-----------~~~~~~l~~l~~~~~~~~~~lvG~S~ 70 (190)
T PRK11071 2 STLLYLHGFNSSPRSAKATLLKNWLAQHHPDIEMIVPQLPPYP-----------ADAAELLESLVLEHGGDPLGLVGSSL 70 (190)
T ss_pred CeEEEECCCCCCcchHHHHHHHHHHHHhCCCCeEEeCCCCCCH-----------HHHHHHHHHHHHHcCCCCeEEEEECH
Confidence 689999999999999984 34556542 6999999999985 35788899999999889999999999
Q ss_pred HHHHHHHHHHhCCcccceEEEEcCCCC
Q 007536 504 GGYFVAIVACLWPAVVKSVVLINSAGN 530 (599)
Q Consensus 504 Gg~ia~~~a~~~p~~v~~lvli~~~~~ 530 (599)
||.+++.+|.++|. ++|+++++..
T Consensus 71 Gg~~a~~~a~~~~~---~~vl~~~~~~ 94 (190)
T PRK11071 71 GGYYATWLSQCFML---PAVVVNPAVR 94 (190)
T ss_pred HHHHHHHHHHHcCC---CEEEECCCCC
Confidence 99999999999983 4688988644
No 63
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.35 E-value=1.2e-11 Score=121.51 Aligned_cols=116 Identities=31% Similarity=0.436 Sum_probs=94.8
Q ss_pred ECCEEEEEEEcCCCCCeEEEECCCCCChHHHHHHHHHHHhC--CCEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 007536 413 WNGYQIQYTVAGKEGPAILLVHGFGAFLEHYRDNIYDIADG--GNRVWAITLLGFGRSEKPNIVYTELMWSELLRDFTVE 490 (599)
Q Consensus 413 ~~g~~l~y~~~g~~~p~vlllHG~~~~~~~w~~~~~~l~~~--g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~ 490 (599)
..+..+.|...+..+|+|+++||++++...|......+... .|+++++|+||||.|. .. .+....+++++..+++.
T Consensus 7 ~~~~~~~~~~~~~~~~~i~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~g~s~-~~-~~~~~~~~~~~~~~~~~ 84 (282)
T COG0596 7 ADGVRLAYREAGGGGPPLVLLHGFPGSSSVWRPVFKVLPALAARYRVIAPDLRGHGRSD-PA-GYSLSAYADDLAALLDA 84 (282)
T ss_pred CCCeEEEEeecCCCCCeEEEeCCCCCchhhhHHHHHHhhccccceEEEEecccCCCCCC-cc-cccHHHHHHHHHHHHHH
Confidence 35566777776644679999999999999998843444332 1899999999999997 22 34455558899999999
Q ss_pred hCCCCEEEEEeChHHHHHHHHHHhCCcccceEEEEcCCCC
Q 007536 491 VVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGN 530 (599)
Q Consensus 491 l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~~~ 530 (599)
++..+++++||||||.+++.++.++|++++++|++++...
T Consensus 85 ~~~~~~~l~G~S~Gg~~~~~~~~~~p~~~~~~v~~~~~~~ 124 (282)
T COG0596 85 LGLEKVVLVGHSMGGAVALALALRHPDRVRGLVLIGPAPP 124 (282)
T ss_pred hCCCceEEEEecccHHHHHHHHHhcchhhheeeEecCCCC
Confidence 9988899999999999999999999999999999998754
No 64
>PRK10985 putative hydrolase; Provisional
Probab=99.35 E-value=1.1e-11 Score=129.10 Aligned_cols=103 Identities=17% Similarity=0.173 Sum_probs=77.2
Q ss_pred CCeEEEECCCCCChH--HHHHHHHHHHhCCCEEEEEcCCCCCCCCCCC-CCC---CHHHHHHHHHHHHHHhCCCCEEEEE
Q 007536 427 GPAILLVHGFGAFLE--HYRDNIYDIADGGNRVWAITLLGFGRSEKPN-IVY---TELMWSELLRDFTVEVVGEPVHLIG 500 (599)
Q Consensus 427 ~p~vlllHG~~~~~~--~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~-~~~---~~~~~~~~l~~~l~~l~~~~~~lvG 500 (599)
+|+||++||++++.. .+..++..|.++||+|+++|+||||.+.... ..+ ..++....+..+.+.++..+++++|
T Consensus 58 ~p~vll~HG~~g~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~~~~vG 137 (324)
T PRK10985 58 KPRLVLFHGLEGSFNSPYAHGLLEAAQKRGWLGVVMHFRGCSGEPNRLHRIYHSGETEDARFFLRWLQREFGHVPTAAVG 137 (324)
T ss_pred CCEEEEeCCCCCCCcCHHHHHHHHHHHHCCCEEEEEeCCCCCCCccCCcceECCCchHHHHHHHHHHHHhCCCCCEEEEE
Confidence 678999999987643 3566889999999999999999999775321 112 2334443444444445667899999
Q ss_pred eChHHHHHHHHHHhCCcc--cceEEEEcCCC
Q 007536 501 NSIGGYFVAIVACLWPAV--VKSVVLINSAG 529 (599)
Q Consensus 501 hS~Gg~ia~~~a~~~p~~--v~~lvli~~~~ 529 (599)
|||||.+++.+++.+++. +.++|+++++.
T Consensus 138 ~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p~ 168 (324)
T PRK10985 138 YSLGGNMLACLLAKEGDDLPLDAAVIVSAPL 168 (324)
T ss_pred ecchHHHHHHHHHhhCCCCCccEEEEEcCCC
Confidence 999999988888887654 89999999864
No 65
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.35 E-value=4.8e-12 Score=134.34 Aligned_cols=121 Identities=20% Similarity=0.196 Sum_probs=96.6
Q ss_pred ECCEEEEEEEcCCC----CCeEEEECCCCCChHH-------------HHHHHH---HHHhCCCEEEEEcCCCCCCCCCC-
Q 007536 413 WNGYQIQYTVAGKE----GPAILLVHGFGAFLEH-------------YRDNIY---DIADGGNRVWAITLLGFGRSEKP- 471 (599)
Q Consensus 413 ~~g~~l~y~~~g~~----~p~vlllHG~~~~~~~-------------w~~~~~---~l~~~g~~vi~~D~~G~G~S~~~- 471 (599)
+.+.+|+|+.+|.- .++||++|++.++++. |..++- .|-...|.||++|..|-|.|..|
T Consensus 38 l~~~~~~Y~t~G~ln~~~~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG~g~~lDt~~yfvi~~n~lG~~~~~~p~ 117 (389)
T PRK06765 38 IPDVQMGYETYGTLNRAKSNVILITHYFSATSHAAGKYTADDEESGYWDGLIGPGKAIDTNKYFVISTDTLCNVQVKDPN 117 (389)
T ss_pred cCCceEEEEeccccCCCCCCEEEEeCCCCCchhhcccccccCCCcccHHhccCCCCCcCCCceEEEEecccCCCcCCCCC
Confidence 46788999999952 4789999999886532 555543 23333599999999998763211
Q ss_pred --------------------CCCCCHHHHHHHHHHHHHHhCCCCEE-EEEeChHHHHHHHHHHhCCcccceEEEEcCCCC
Q 007536 472 --------------------NIVYTELMWSELLRDFTVEVVGEPVH-LIGNSIGGYFVAIVACLWPAVVKSVVLINSAGN 530 (599)
Q Consensus 472 --------------------~~~~~~~~~~~~l~~~l~~l~~~~~~-lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~~~ 530 (599)
...+++.++++++.++++++++++++ ++||||||++++.+|.+||++|+++|++++...
T Consensus 118 ~g~tgp~s~~p~tg~~~~~~fP~~t~~d~~~~~~~ll~~lgi~~~~~vvG~SmGG~ial~~a~~~P~~v~~lv~ia~~~~ 197 (389)
T PRK06765 118 VITTGPASINPKTGKPYGMDFPVVTILDFVRVQKELIKSLGIARLHAVMGPSMGGMQAQEWAVHYPHMVERMIGVIGNPQ 197 (389)
T ss_pred CCCCCCCCCCcCCCCccCCCCCcCcHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEecCCC
Confidence 11378999999999999999999986 999999999999999999999999999998765
Q ss_pred CCC
Q 007536 531 VIP 533 (599)
Q Consensus 531 ~~~ 533 (599)
..+
T Consensus 198 ~~~ 200 (389)
T PRK06765 198 NDA 200 (389)
T ss_pred CCh
Confidence 443
No 66
>PRK10566 esterase; Provisional
Probab=99.33 E-value=1.9e-11 Score=122.11 Aligned_cols=109 Identities=17% Similarity=0.140 Sum_probs=76.1
Q ss_pred EEEEEcCC---CCCeEEEECCCCCChHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCCCHH-------HHHHHHHHH
Q 007536 418 IQYTVAGK---EGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNIVYTEL-------MWSELLRDF 487 (599)
Q Consensus 418 l~y~~~g~---~~p~vlllHG~~~~~~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~-------~~~~~l~~~ 487 (599)
++|...+. ..|+||++||++++...|..++..|+++||+|+++|+||||.+.......... ...+++.++
T Consensus 15 ~~~~p~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (249)
T PRK10566 15 LHAFPAGQRDTPLPTVFFYHGFTSSKLVYSYFAVALAQAGFRVIMPDAPMHGARFSGDEARRLNHFWQILLQNMQEFPTL 94 (249)
T ss_pred EEEcCCCCCCCCCCEEEEeCCCCcccchHHHHHHHHHhCCCEEEEecCCcccccCCCccccchhhHHHHHHHHHHHHHHH
Confidence 44544332 25799999999999989999999999999999999999999864322111111 112233333
Q ss_pred HHH---h---CCCCEEEEEeChHHHHHHHHHHhCCcccceEEEEc
Q 007536 488 TVE---V---VGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLIN 526 (599)
Q Consensus 488 l~~---l---~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~ 526 (599)
++. . ..++++++||||||.+++.++..+|+...++++++
T Consensus 95 ~~~l~~~~~~~~~~i~v~G~S~Gg~~al~~~~~~~~~~~~~~~~~ 139 (249)
T PRK10566 95 RAAIREEGWLLDDRLAVGGASMGGMTALGIMARHPWVKCVASLMG 139 (249)
T ss_pred HHHHHhcCCcCccceeEEeecccHHHHHHHHHhCCCeeEEEEeeC
Confidence 332 2 23689999999999999999999886444444444
No 67
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=99.29 E-value=9.4e-11 Score=114.85 Aligned_cols=112 Identities=21% Similarity=0.232 Sum_probs=98.3
Q ss_pred EEEEEcCCCC---CeEEEECCCCCChHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCC-CCCCHHHHHHHHHHHHHHhCC
Q 007536 418 IQYTVAGKEG---PAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPN-IVYTELMWSELLRDFTVEVVG 493 (599)
Q Consensus 418 l~y~~~g~~~---p~vlllHG~~~~~~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~-~~~~~~~~~~~l~~~l~~l~~ 493 (599)
--|.+..+.+ .+||=+||.+||..+|+.+.+.|.+.|.|+|.+++||+|.++++. ..|+-......+.++++.+++
T Consensus 23 a~y~D~~~~gs~~gTVv~~hGsPGSH~DFkYi~~~l~~~~iR~I~iN~PGf~~t~~~~~~~~~n~er~~~~~~ll~~l~i 102 (297)
T PF06342_consen 23 AVYEDSLPSGSPLGTVVAFHGSPGSHNDFKYIRPPLDEAGIRFIGINYPGFGFTPGYPDQQYTNEERQNFVNALLDELGI 102 (297)
T ss_pred EEEEecCCCCCCceeEEEecCCCCCccchhhhhhHHHHcCeEEEEeCCCCCCCCCCCcccccChHHHHHHHHHHHHHcCC
Confidence 3466655442 379999999999999999999999999999999999999998755 478888899999999999998
Q ss_pred -CCEEEEEeChHHHHHHHHHHhCCcccceEEEEcCCCCC
Q 007536 494 -EPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNV 531 (599)
Q Consensus 494 -~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~~~~ 531 (599)
++++++|||.|+-.|+.+|..+| +.|+++++|++..
T Consensus 103 ~~~~i~~gHSrGcenal~la~~~~--~~g~~lin~~G~r 139 (297)
T PF06342_consen 103 KGKLIFLGHSRGCENALQLAVTHP--LHGLVLINPPGLR 139 (297)
T ss_pred CCceEEEEeccchHHHHHHHhcCc--cceEEEecCCccc
Confidence 67999999999999999999996 6799999998763
No 68
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.27 E-value=3.4e-11 Score=109.47 Aligned_cols=92 Identities=29% Similarity=0.429 Sum_probs=75.0
Q ss_pred eEEEECCCCCChHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHH-HhCCCCEEEEEeChHHHH
Q 007536 429 AILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNIVYTELMWSELLRDFTV-EVVGEPVHLIGNSIGGYF 507 (599)
Q Consensus 429 ~vlllHG~~~~~~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~-~l~~~~~~lvGhS~Gg~i 507 (599)
+||++||++++...|..+++.|+++||.|+.+|+||+|.+.... ...+.+..+.. ....++++++|||+||.+
T Consensus 1 ~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~ 74 (145)
T PF12695_consen 1 VVVLLHGWGGSRRDYQPLAEALAEQGYAVVAFDYPGHGDSDGAD------AVERVLADIRAGYPDPDRIILIGHSMGGAI 74 (145)
T ss_dssp EEEEECTTTTTTHHHHHHHHHHHHTTEEEEEESCTTSTTSHHSH------HHHHHHHHHHHHHCTCCEEEEEEETHHHHH
T ss_pred CEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEecCCCCccchhH------HHHHHHHHHHhhcCCCCcEEEEEEccCcHH
Confidence 58999999999999999999999999999999999999873221 22222222212 135589999999999999
Q ss_pred HHHHHHhCCcccceEEEEcC
Q 007536 508 VAIVACLWPAVVKSVVLINS 527 (599)
Q Consensus 508 a~~~a~~~p~~v~~lvli~~ 527 (599)
++.++.++ .+|+++|++++
T Consensus 75 a~~~~~~~-~~v~~~v~~~~ 93 (145)
T PF12695_consen 75 AANLAARN-PRVKAVVLLSP 93 (145)
T ss_dssp HHHHHHHS-TTESEEEEESE
T ss_pred HHHHhhhc-cceeEEEEecC
Confidence 99999998 68999999998
No 69
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=99.27 E-value=4.1e-11 Score=134.75 Aligned_cols=126 Identities=21% Similarity=0.157 Sum_probs=96.2
Q ss_pred ceeEEEEEECCEEEEEEEcCCC----------CCeEEEECCCCCChHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCC---
Q 007536 405 VYSTRIWRWNGYQIQYTVAGKE----------GPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKP--- 471 (599)
Q Consensus 405 ~~~~~~~~~~g~~l~y~~~g~~----------~p~vlllHG~~~~~~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~--- 471 (599)
..+.++...++.+|.|...|.. .|+|||+||++++...|..+++.|+++||+|+++|+||||.|...
T Consensus 417 ~vp~~~~~p~~~~i~~~~~~~g~~~~~~p~~g~P~VVllHG~~g~~~~~~~lA~~La~~Gy~VIaiDlpGHG~S~~~~~~ 496 (792)
T TIGR03502 417 NVPVLLTTPNGPVIAAFRAGTGLETFAAPTDGWPVVIYQHGITGAKENALAFAGTLAAAGVATIAIDHPLHGARSFDANA 496 (792)
T ss_pred ccceEEEecCcchhhhhhcccccccccCCCCCCcEEEEeCCCCCCHHHHHHHHHHHHhCCcEEEEeCCCCCCcccccccc
Confidence 3556778888988888765432 248999999999999999999999988999999999999999432
Q ss_pred -------CC--CC-----------CHHHHHHHHHHHHHHhC----------------CCCEEEEEeChHHHHHHHHHHhC
Q 007536 472 -------NI--VY-----------TELMWSELLRDFTVEVV----------------GEPVHLIGNSIGGYFVAIVACLW 515 (599)
Q Consensus 472 -------~~--~~-----------~~~~~~~~l~~~l~~l~----------------~~~~~lvGhS~Gg~ia~~~a~~~ 515 (599)
.. .| ++.+.+.|+..+...+. ..+++++||||||.++..++...
T Consensus 497 ~~~~a~~~~~~~y~Nl~~l~~aRDn~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~a 576 (792)
T TIGR03502 497 SGVNATNANVLAYMNLASLLVARDNLRQSILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAYA 576 (792)
T ss_pred ccccccccCccceeccccccccccCHHHHHHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHhc
Confidence 11 12 56777778877776665 35899999999999999998753
Q ss_pred Cc-----------ccceEEEEcCCCC
Q 007536 516 PA-----------VVKSVVLINSAGN 530 (599)
Q Consensus 516 p~-----------~v~~lvli~~~~~ 530 (599)
.. .+.+..+..|.+.
T Consensus 577 n~~~~~~~~~~l~~~~~a~l~~pgGg 602 (792)
T TIGR03502 577 NTPLGSPTADALYAVNAASLQNPGGG 602 (792)
T ss_pred CccccCCccccccccceeeeecCCcc
Confidence 22 3456666666544
No 70
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.27 E-value=2e-11 Score=128.61 Aligned_cols=117 Identities=16% Similarity=0.157 Sum_probs=87.8
Q ss_pred EECCEEEEEEEcC---CCCCeEEEECCCCCChHHH-----HHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCCCHHHHH--
Q 007536 412 RWNGYQIQYTVAG---KEGPAILLVHGFGAFLEHY-----RDNIYDIADGGNRVWAITLLGFGRSEKPNIVYTELMWS-- 481 (599)
Q Consensus 412 ~~~g~~l~y~~~g---~~~p~vlllHG~~~~~~~w-----~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~-- 481 (599)
+.++..++..... ..++|||++||+..+...+ +.+++.|+++||+|+++|++|+|.|+.. ++.+++.
T Consensus 44 ~~~~~~l~~~~~~~~~~~~~pvl~v~~~~~~~~~~d~~~~~~~~~~L~~~G~~V~~~D~~g~g~s~~~---~~~~d~~~~ 120 (350)
T TIGR01836 44 REDKVVLYRYTPVKDNTHKTPLLIVYALVNRPYMLDLQEDRSLVRGLLERGQDVYLIDWGYPDRADRY---LTLDDYING 120 (350)
T ss_pred EcCcEEEEEecCCCCcCCCCcEEEeccccccceeccCCCCchHHHHHHHCCCeEEEEeCCCCCHHHhc---CCHHHHHHH
Confidence 3445555443321 1256899999986655544 6899999999999999999999987643 3545443
Q ss_pred ---HHHHHHHHHhCCCCEEEEEeChHHHHHHHHHHhCCcccceEEEEcCCCCC
Q 007536 482 ---ELLRDFTVEVVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNV 531 (599)
Q Consensus 482 ---~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~~~~ 531 (599)
+.+..+++..+.++++++||||||.+++.+++.+|++|+++|+++++...
T Consensus 121 ~~~~~v~~l~~~~~~~~i~lvGhS~GG~i~~~~~~~~~~~v~~lv~~~~p~~~ 173 (350)
T TIGR01836 121 YIDKCVDYICRTSKLDQISLLGICQGGTFSLCYAALYPDKIKNLVTMVTPVDF 173 (350)
T ss_pred HHHHHHHHHHHHhCCCcccEEEECHHHHHHHHHHHhCchheeeEEEecccccc
Confidence 33444555566789999999999999999999999999999999987543
No 71
>PLN00021 chlorophyllase
Probab=99.26 E-value=2.7e-11 Score=124.82 Aligned_cols=104 Identities=18% Similarity=0.172 Sum_probs=77.0
Q ss_pred CCCeEEEECCCCCChHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHH-------hCCCCEEE
Q 007536 426 EGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNIVYTELMWSELLRDFTVE-------VVGEPVHL 498 (599)
Q Consensus 426 ~~p~vlllHG~~~~~~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~-------l~~~~~~l 498 (599)
..|+|||+||++.+...|..+++.|+++||.|+++|++|++.+.......+...+.+++.+.++. .+.++++|
T Consensus 51 ~~PvVv~lHG~~~~~~~y~~l~~~Las~G~~VvapD~~g~~~~~~~~~i~d~~~~~~~l~~~l~~~l~~~~~~d~~~v~l 130 (313)
T PLN00021 51 TYPVLLFLHGYLLYNSFYSQLLQHIASHGFIVVAPQLYTLAGPDGTDEIKDAAAVINWLSSGLAAVLPEGVRPDLSKLAL 130 (313)
T ss_pred CCCEEEEECCCCCCcccHHHHHHHHHhCCCEEEEecCCCcCCCCchhhHHHHHHHHHHHHhhhhhhcccccccChhheEE
Confidence 46899999999999999999999999999999999999975432211111122223333332222 22368999
Q ss_pred EEeChHHHHHHHHHHhCCc-----ccceEEEEcCCC
Q 007536 499 IGNSIGGYFVAIVACLWPA-----VVKSVVLINSAG 529 (599)
Q Consensus 499 vGhS~Gg~ia~~~a~~~p~-----~v~~lvli~~~~ 529 (599)
+||||||.+|+.+|..+++ +++++|++++..
T Consensus 131 ~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv~ 166 (313)
T PLN00021 131 AGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPVD 166 (313)
T ss_pred EEECcchHHHHHHHhhccccccccceeeEEeecccc
Confidence 9999999999999999874 689999999853
No 72
>PLN02872 triacylglycerol lipase
Probab=99.26 E-value=1.2e-11 Score=131.37 Aligned_cols=123 Identities=20% Similarity=0.248 Sum_probs=93.3
Q ss_pred EEEEEECCEEEEEEEcC--------CCCCeEEEECCCCCChHHHH------HHHHHHHhCCCEEEEEcCCCCCCCCC---
Q 007536 408 TRIWRWNGYQIQYTVAG--------KEGPAILLVHGFGAFLEHYR------DNIYDIADGGNRVWAITLLGFGRSEK--- 470 (599)
Q Consensus 408 ~~~~~~~g~~l~y~~~g--------~~~p~vlllHG~~~~~~~w~------~~~~~l~~~g~~vi~~D~~G~G~S~~--- 470 (599)
+.+.+-||..|...... ..+|+|||+||+++++..|. .++..|+++||+|+++|+||+|.|.+
T Consensus 47 h~v~T~DGy~L~l~ri~~~~~~~~~~~~~~Vll~HGl~~ss~~w~~~~~~~sla~~La~~GydV~l~n~RG~~~s~gh~~ 126 (395)
T PLN02872 47 HTIQTKDGYLLALQRVSSRNPRLGSQRGPPVLLQHGLFMAGDAWFLNSPEQSLGFILADHGFDVWVGNVRGTRWSYGHVT 126 (395)
T ss_pred EEEECCCCcEEEEEEcCCCCCCCCCCCCCeEEEeCcccccccceeecCcccchHHHHHhCCCCcccccccccccccCCCC
Confidence 34456689888876632 12579999999999988884 34556888899999999999987632
Q ss_pred ----CCC--CCCHHHHH-HHHHHHHHHh---CCCCEEEEEeChHHHHHHHHHHhCCc---ccceEEEEcCCCCC
Q 007536 471 ----PNI--VYTELMWS-ELLRDFTVEV---VGEPVHLIGNSIGGYFVAIVACLWPA---VVKSVVLINSAGNV 531 (599)
Q Consensus 471 ----~~~--~~~~~~~~-~~l~~~l~~l---~~~~~~lvGhS~Gg~ia~~~a~~~p~---~v~~lvli~~~~~~ 531 (599)
+.. .++.+.++ .|+.++++.+ ..+++++|||||||.+++.++ .+|+ +|+.+++++|....
T Consensus 127 ~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~~~~~v~~VGhS~Gg~~~~~~~-~~p~~~~~v~~~~~l~P~~~~ 199 (395)
T PLN02872 127 LSEKDKEFWDWSWQELALYDLAEMIHYVYSITNSKIFIVGHSQGTIMSLAAL-TQPNVVEMVEAAALLCPISYL 199 (395)
T ss_pred CCccchhccCCcHHHHHHHHHHHHHHHHHhccCCceEEEEECHHHHHHHHHh-hChHHHHHHHHHHHhcchhhh
Confidence 111 35677777 6888888876 347999999999999998544 6776 68999999987553
No 73
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.24 E-value=3.8e-11 Score=120.25 Aligned_cols=104 Identities=22% Similarity=0.346 Sum_probs=92.8
Q ss_pred CCCeEEEECCCCCChHHHHHHHHHHHhC-CCEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC----CCCEEEEE
Q 007536 426 EGPAILLVHGFGAFLEHYRDNIYDIADG-GNRVWAITLLGFGRSEKPNIVYTELMWSELLRDFTVEVV----GEPVHLIG 500 (599)
Q Consensus 426 ~~p~vlllHG~~~~~~~w~~~~~~l~~~-g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~----~~~~~lvG 500 (599)
..|+++++||+.++..+|+.+...|+.. +..|+++|.|-||.|.... .++...+++++..|++..+ ..+++|+|
T Consensus 51 ~~Pp~i~lHGl~GS~~Nw~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~~-~h~~~~ma~dv~~Fi~~v~~~~~~~~~~l~G 129 (315)
T KOG2382|consen 51 RAPPAIILHGLLGSKENWRSVAKNLSRKLGRDVYAVDVRNHGSSPKIT-VHNYEAMAEDVKLFIDGVGGSTRLDPVVLLG 129 (315)
T ss_pred CCCceEEecccccCCCCHHHHHHHhcccccCceEEEecccCCCCcccc-ccCHHHHHHHHHHHHHHcccccccCCceecc
Confidence 4799999999999999999999999865 7899999999999997644 5678999999999999885 47899999
Q ss_pred eChHH-HHHHHHHHhCCcccceEEEEcCCCC
Q 007536 501 NSIGG-YFVAIVACLWPAVVKSVVLINSAGN 530 (599)
Q Consensus 501 hS~Gg-~ia~~~a~~~p~~v~~lvli~~~~~ 530 (599)
||||| .+++..+..+|+.+..+|+++.++.
T Consensus 130 HsmGG~~~~m~~t~~~p~~~~rliv~D~sP~ 160 (315)
T KOG2382|consen 130 HSMGGVKVAMAETLKKPDLIERLIVEDISPG 160 (315)
T ss_pred cCcchHHHHHHHHHhcCcccceeEEEecCCc
Confidence 99999 7788888899999999999998764
No 74
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.18 E-value=9.5e-11 Score=128.07 Aligned_cols=105 Identities=15% Similarity=0.115 Sum_probs=86.6
Q ss_pred CCeEEEECCCCCChHHHH-----HHHHHHHhCCCEEEEEcCCCCCCCCCCC--CCCCHHHHHHHHHHHHHHhCCCCEEEE
Q 007536 427 GPAILLVHGFGAFLEHYR-----DNIYDIADGGNRVWAITLLGFGRSEKPN--IVYTELMWSELLRDFTVEVVGEPVHLI 499 (599)
Q Consensus 427 ~p~vlllHG~~~~~~~w~-----~~~~~l~~~g~~vi~~D~~G~G~S~~~~--~~~~~~~~~~~l~~~l~~l~~~~~~lv 499 (599)
++|||++||+......|+ .+++.|.++||+|+++|++|+|.|.... ..|..+.+.+.+..+++..+.++++++
T Consensus 188 ~~PlLiVp~~i~k~yilDL~p~~Slv~~L~~qGf~V~~iDwrgpg~s~~~~~~ddY~~~~i~~al~~v~~~~g~~kv~lv 267 (532)
T TIGR01838 188 KTPLLIVPPWINKYYILDLRPQNSLVRWLVEQGHTVFVISWRNPDASQADKTFDDYIRDGVIAALEVVEAITGEKQVNCV 267 (532)
T ss_pred CCcEEEECcccccceeeecccchHHHHHHHHCCcEEEEEECCCCCcccccCChhhhHHHHHHHHHHHHHHhcCCCCeEEE
Confidence 689999999988888885 7899999999999999999999886532 355556677778888877888999999
Q ss_pred EeChHHHHHH----HHHHhC-CcccceEEEEcCCCCC
Q 007536 500 GNSIGGYFVA----IVACLW-PAVVKSVVLINSAGNV 531 (599)
Q Consensus 500 GhS~Gg~ia~----~~a~~~-p~~v~~lvli~~~~~~ 531 (599)
||||||.++. .+++.+ +++|++++++++....
T Consensus 268 G~cmGGtl~a~ala~~aa~~~~~rv~slvll~t~~Df 304 (532)
T TIGR01838 268 GYCIGGTLLSTALAYLAARGDDKRIKSATFFTTLLDF 304 (532)
T ss_pred EECcCcHHHHHHHHHHHHhCCCCccceEEEEecCcCC
Confidence 9999999852 245555 7899999999987543
No 75
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.18 E-value=5.7e-11 Score=116.16 Aligned_cols=74 Identities=28% Similarity=0.341 Sum_probs=69.0
Q ss_pred CEEEEEcCCCCCCCCC----CCCCCCHHHHHHHHHHHHHHhCCCCEEEEEeChHHHHHHHHHHhCCcccceEEEEcCC
Q 007536 455 NRVWAITLLGFGRSEK----PNIVYTELMWSELLRDFTVEVVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSA 528 (599)
Q Consensus 455 ~~vi~~D~~G~G~S~~----~~~~~~~~~~~~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~ 528 (599)
|+|+++|+||+|.|++ ....++..++++++..+++.++.++++++||||||.+++.+|+.+|++|+++|++++.
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vG~S~Gg~~~~~~a~~~p~~v~~lvl~~~~ 78 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPDFPDYTTDDLAADLEALREALGIKKINLVGHSMGGMLALEYAAQYPERVKKLVLISPP 78 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSGSCTHCHHHHHHHHHHHHHHHTTSSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESES
T ss_pred CEEEEEeCCCCCCCCCCccCCcccccHHHHHHHHHHHHHHhCCCCeEEEEECCChHHHHHHHHHCchhhcCcEEEeee
Confidence 6899999999999994 2347899999999999999999999999999999999999999999999999999985
No 76
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.15 E-value=3.9e-10 Score=110.11 Aligned_cols=104 Identities=17% Similarity=0.128 Sum_probs=75.3
Q ss_pred CCCeEEEECCCCCChHHHH---HHHHHHHhCCCEEEEEcCCCCCCCCCCC----------CCCCHHHHHHHHHHHHHHhC
Q 007536 426 EGPAILLVHGFGAFLEHYR---DNIYDIADGGNRVWAITLLGFGRSEKPN----------IVYTELMWSELLRDFTVEVV 492 (599)
Q Consensus 426 ~~p~vlllHG~~~~~~~w~---~~~~~l~~~g~~vi~~D~~G~G~S~~~~----------~~~~~~~~~~~l~~~l~~l~ 492 (599)
..|.||++||++++...+. .+...+.+.||.|+++|.+|+|.+.... ......++.+.+..+.....
T Consensus 12 ~~P~vv~lHG~~~~~~~~~~~~~~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 91 (212)
T TIGR01840 12 PRALVLALHGCGQTASAYVIDWGWKAAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVESLHQLIDAVKANYS 91 (212)
T ss_pred CCCEEEEeCCCCCCHHHHhhhcChHHHHHhCCeEEEecCCcCccccCCCCCCCCccccCCCCccHHHHHHHHHHHHHhcC
Confidence 4689999999999877765 2444555569999999999987543210 01122333334444444433
Q ss_pred C--CCEEEEEeChHHHHHHHHHHhCCcccceEEEEcCCC
Q 007536 493 G--EPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAG 529 (599)
Q Consensus 493 ~--~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~~ 529 (599)
+ ++++|+||||||.+++.++..+|+.+.+++.+++..
T Consensus 92 id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~g~~ 130 (212)
T TIGR01840 92 IDPNRVYVTGLSAGGGMTAVLGCTYPDVFAGGASNAGLP 130 (212)
T ss_pred cChhheEEEEECHHHHHHHHHHHhCchhheEEEeecCCc
Confidence 3 589999999999999999999999999999998764
No 77
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.13 E-value=9.9e-10 Score=111.78 Aligned_cols=118 Identities=19% Similarity=0.192 Sum_probs=82.8
Q ss_pred ECCEEEEEEEcCC------CCCeEEEECCCCCChHHHHHH--HHHHH-hCCCEEEEEcC--CCCCCCCCC----------
Q 007536 413 WNGYQIQYTVAGK------EGPAILLVHGFGAFLEHYRDN--IYDIA-DGGNRVWAITL--LGFGRSEKP---------- 471 (599)
Q Consensus 413 ~~g~~l~y~~~g~------~~p~vlllHG~~~~~~~w~~~--~~~l~-~~g~~vi~~D~--~G~G~S~~~---------- 471 (599)
..+..+.|..+.| +.|+|+|+||++++...|... +..++ +.|+.|+++|. +|+|.+...
T Consensus 22 ~~~~~~~~~v~~P~~~~~~~~P~vvllHG~~~~~~~~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~~~~~~w~~g~~~~ 101 (275)
T TIGR02821 22 TCGVPMTFGVFLPPQAAAGPVPVLWYLSGLTCTHENFMIKAGAQRFAAEHGLALVAPDTSPRGTGIAGEDDAWDFGKGAG 101 (275)
T ss_pred ccCCceEEEEEcCCCccCCCCCEEEEccCCCCCccHHHhhhHHHHHHhhcCcEEEEeCCCCCcCCCCCCcccccccCCcc
Confidence 3455555554432 257899999999998888542 34454 45899999998 555533210
Q ss_pred ----------CCCCCHH-HHHHHHHHHHHH---hCCCCEEEEEeChHHHHHHHHHHhCCcccceEEEEcCCCC
Q 007536 472 ----------NIVYTEL-MWSELLRDFTVE---VVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGN 530 (599)
Q Consensus 472 ----------~~~~~~~-~~~~~l~~~l~~---l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~~~ 530 (599)
...+... ...+++..++++ +..++++++||||||.+|+.++.++|+.+++++++++...
T Consensus 102 ~~~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~ 174 (275)
T TIGR02821 102 FYVDATEEPWSQHYRMYSYIVQELPALVAAQFPLDGERQGITGHSMGGHGALVIALKNPDRFKSVSAFAPIVA 174 (275)
T ss_pred ccccCCcCcccccchHHHHHHHHHHHHHHhhCCCCCCceEEEEEChhHHHHHHHHHhCcccceEEEEECCccC
Confidence 0012222 335666677766 2346899999999999999999999999999999988644
No 78
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.11 E-value=2.5e-10 Score=127.46 Aligned_cols=116 Identities=16% Similarity=0.072 Sum_probs=88.7
Q ss_pred CCEEEEEEEcCC----CCCeEEEECCCCCChH---HH-HHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCCCHHHHHHHHH
Q 007536 414 NGYQIQYTVAGK----EGPAILLVHGFGAFLE---HY-RDNIYDIADGGNRVWAITLLGFGRSEKPNIVYTELMWSELLR 485 (599)
Q Consensus 414 ~g~~l~y~~~g~----~~p~vlllHG~~~~~~---~w-~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~ 485 (599)
||.+|++..+.+ ..|+||++||++.+.. .+ ......|+++||.|+++|+||+|.|++....++ ...++|+.
T Consensus 5 DG~~L~~~~~~P~~~~~~P~Il~~~gyg~~~~~~~~~~~~~~~~l~~~Gy~vv~~D~RG~g~S~g~~~~~~-~~~~~D~~ 83 (550)
T TIGR00976 5 DGTRLAIDVYRPAGGGPVPVILSRTPYGKDAGLRWGLDKTEPAWFVAQGYAVVIQDTRGRGASEGEFDLLG-SDEAADGY 83 (550)
T ss_pred CCCEEEEEEEecCCCCCCCEEEEecCCCCchhhccccccccHHHHHhCCcEEEEEeccccccCCCceEecC-cccchHHH
Confidence 777887554422 3578999999987653 22 234567888899999999999999987544333 34566667
Q ss_pred HHHHHhC-----CCCEEEEEeChHHHHHHHHHHhCCcccceEEEEcCCCC
Q 007536 486 DFTVEVV-----GEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGN 530 (599)
Q Consensus 486 ~~l~~l~-----~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~~~ 530 (599)
++++.+. ..++.++|||+||.+++.+|..+|++++++|..++...
T Consensus 84 ~~i~~l~~q~~~~~~v~~~G~S~GG~~a~~~a~~~~~~l~aiv~~~~~~d 133 (550)
T TIGR00976 84 DLVDWIAKQPWCDGNVGMLGVSYLAVTQLLAAVLQPPALRAIAPQEGVWD 133 (550)
T ss_pred HHHHHHHhCCCCCCcEEEEEeChHHHHHHHHhccCCCceeEEeecCcccc
Confidence 7766552 25899999999999999999999999999999887643
No 79
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=99.10 E-value=4.8e-10 Score=90.93 Aligned_cols=74 Identities=27% Similarity=0.359 Sum_probs=62.5
Q ss_pred CEEEEEEEcCCC---CCeEEEECCCCCChHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCC-CCCHHHHHHHHHHHH
Q 007536 415 GYQIQYTVAGKE---GPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNI-VYTELMWSELLRDFT 488 (599)
Q Consensus 415 g~~l~y~~~g~~---~p~vlllHG~~~~~~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~-~~~~~~~~~~l~~~l 488 (599)
|.+|+|+.+.++ +.+|+++||++.++..|..+++.|+++||.|+++|++|||.|++... .-+.+++.+|+..++
T Consensus 1 G~~L~~~~w~p~~~~k~~v~i~HG~~eh~~ry~~~a~~L~~~G~~V~~~D~rGhG~S~g~rg~~~~~~~~v~D~~~~~ 78 (79)
T PF12146_consen 1 GTKLFYRRWKPENPPKAVVVIVHGFGEHSGRYAHLAEFLAEQGYAVFAYDHRGHGRSEGKRGHIDSFDDYVDDLHQFI 78 (79)
T ss_pred CcEEEEEEecCCCCCCEEEEEeCCcHHHHHHHHHHHHHHHhCCCEEEEECCCcCCCCCCcccccCCHHHHHHHHHHHh
Confidence 567888887765 34789999999999999999999999999999999999999986544 346778888888776
No 80
>PF03441 FAD_binding_7: FAD binding domain of DNA photolyase from Prosite.; InterPro: IPR005101 This entry represents a multi-helical domain composed of two all-alpha subdomains that is found as the C-terminal domain in cryptochrome proteins, as well as at the N-terminal of DNA photolyase where it acts as a FAD-binding domain (the N-terminal of DNA photolyase binds a light-harvesting cofactor). Photolyases and cryptochromes are related flavoproteins that bind FAD. Photolyases harness the energy of blue light to repair DNA damage by removing pyrimidine dimers. Cryptochromes (CRY1 and CRY2) are blue light photoreceptors that mediate blue light-induced gene expression [, ]. DNA photolyases are DNA repair enzymes that repair mismatched pyrimidine dimers induced by exposure to ultra-violet light. They bind to UV-damaged DNA containing pyrimidine dimers and, upon absorbing a near-UV photon (300 to 500 nm), they catalyse dimer splitting, breaking the cyclobutane ring joining the two pyrimidines of the dimer so as to split them into the constituent monomers; this process is called photoreactivation. DNA photolyases require two choromophore-cofactors for their activity. All monomers contain a reduced FAD moiety, and, in addition, either a reduced pterin or 8-hydroxy-5-diazaflavin as a second chromophore. Either chromophore may act as the primary photon acceptor, peak absorptions occurring in the blue region of the spectrum and in the UV-B region, at a wavelength around 290nm [, ].; GO: 0003913 DNA photolyase activity, 0006281 DNA repair; PDB: 3UMV_A 3ZXS_A 1DNP_A 2XRZ_B 2XRY_A 2VTB_A 2J4D_B 2IJG_X 3TVS_A 2E0I_D ....
Probab=99.10 E-value=5.9e-11 Score=120.33 Aligned_cols=59 Identities=27% Similarity=0.407 Sum_probs=50.0
Q ss_pred cChHHHHHHHHHHHHhhccCccchHHHHHHhhccccCCCCCCcccccccchhccccchhHHHHHHhhhhh
Q 007536 292 GGTNAVLNALQAYLRYLEGTVRDDWQELQEKLRNAESRDGASFATLFGPALCLGIISRRGVHYEAIKFEK 361 (599)
Q Consensus 292 gGe~~A~~~L~~fl~~~~~~~~~~Y~~~rn~~r~~~~~~~~~~tS~LSpyL~~G~IS~R~v~~~v~~~~~ 361 (599)
|||++|+++|+.|++ .++..|.+.||. |+.++||+|||||+|||||||+|++++.+...
T Consensus 1 GGe~~A~~~L~~Fl~----~~l~~Y~~~r~~-------p~~~~~S~LSpyL~~G~lS~r~v~~~~~~~~~ 59 (277)
T PF03441_consen 1 GGETAALKRLEEFLK----ERLADYGEQRDD-------PAADGTSRLSPYLNFGCLSPREVYRAVKKAQE 59 (277)
T ss_dssp SSHHHHHHHHHHHHH----HCGGGHHHHTT--------TTSTTS---HHHHHTTSS-HHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHH----HHHHhhchhccC-------CCcCCcCcccHHHhCCCcCHHHHHHHHHHHhh
Confidence 899999999999996 899999998763 68899999999999999999999999988776
No 81
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.07 E-value=7e-10 Score=132.17 Aligned_cols=102 Identities=25% Similarity=0.337 Sum_probs=80.4
Q ss_pred CCCeEEEECCCCCChHHHHHH-----HHHHHhCCCEEEEEcCCCCCCCCCCCC--CCCHHHHHHHHHHHHHH---hCCCC
Q 007536 426 EGPAILLVHGFGAFLEHYRDN-----IYDIADGGNRVWAITLLGFGRSEKPNI--VYTELMWSELLRDFTVE---VVGEP 495 (599)
Q Consensus 426 ~~p~vlllHG~~~~~~~w~~~-----~~~l~~~g~~vi~~D~~G~G~S~~~~~--~~~~~~~~~~l~~~l~~---l~~~~ 495 (599)
.++||||+||++.+...|+.+ ++.|.++||+|+++| +|.|+.+.. .+++.+....+.+.++. ...++
T Consensus 66 ~~~plllvhg~~~~~~~~d~~~~~s~v~~L~~~g~~v~~~d---~G~~~~~~~~~~~~l~~~i~~l~~~l~~v~~~~~~~ 142 (994)
T PRK07868 66 VGPPVLMVHPMMMSADMWDVTRDDGAVGILHRAGLDPWVID---FGSPDKVEGGMERNLADHVVALSEAIDTVKDVTGRD 142 (994)
T ss_pred CCCcEEEECCCCCCccceecCCcccHHHHHHHCCCEEEEEc---CCCCChhHcCccCCHHHHHHHHHHHHHHHHHhhCCc
Confidence 368999999999999999865 889999899999999 577765433 24555555555555543 34578
Q ss_pred EEEEEeChHHHHHHHHHHhC-CcccceEEEEcCCCC
Q 007536 496 VHLIGNSIGGYFVAIVACLW-PAVVKSVVLINSAGN 530 (599)
Q Consensus 496 ~~lvGhS~Gg~ia~~~a~~~-p~~v~~lvli~~~~~ 530 (599)
++++||||||.+++.+++.+ +++|+++|+++++..
T Consensus 143 v~lvG~s~GG~~a~~~aa~~~~~~v~~lvl~~~~~d 178 (994)
T PRK07868 143 VHLVGYSQGGMFCYQAAAYRRSKDIASIVTFGSPVD 178 (994)
T ss_pred eEEEEEChhHHHHHHHHHhcCCCccceEEEEecccc
Confidence 99999999999999998755 568999999888743
No 82
>PLN02442 S-formylglutathione hydrolase
Probab=99.02 E-value=3.1e-09 Score=108.60 Aligned_cols=104 Identities=19% Similarity=0.158 Sum_probs=75.5
Q ss_pred CCeEEEECCCCCChHHHHHH---HHHHHhCCCEEEEEcCCCCCC-----CCC-------------CC------C--CCCH
Q 007536 427 GPAILLVHGFGAFLEHYRDN---IYDIADGGNRVWAITLLGFGR-----SEK-------------PN------I--VYTE 477 (599)
Q Consensus 427 ~p~vlllHG~~~~~~~w~~~---~~~l~~~g~~vi~~D~~G~G~-----S~~-------------~~------~--~~~~ 477 (599)
-|+|+|+||++++...|... ...+...|+.|+.+|..++|. +.. .. . .+-.
T Consensus 47 ~Pvv~~lHG~~~~~~~~~~~~~~~~~~~~~g~~Vv~pd~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (283)
T PLN02442 47 VPVLYWLSGLTCTDENFIQKSGAQRAAAARGIALVAPDTSPRGLNVEGEADSWDFGVGAGFYLNATQEKWKNWRMYDYVV 126 (283)
T ss_pred CCEEEEecCCCcChHHHHHhhhHHHHHhhcCeEEEecCCCCCCCCCCCCccccccCCCcceeeccccCCCcccchhhhHH
Confidence 58899999999988777543 355666799999999987761 100 00 0 1112
Q ss_pred HHHHHHHHHHHHHhCCCCEEEEEeChHHHHHHHHHHhCCcccceEEEEcCCCC
Q 007536 478 LMWSELLRDFTVEVVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGN 530 (599)
Q Consensus 478 ~~~~~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~~~ 530 (599)
+.+...+...++.++.++++|+||||||..|+.++.++|+++++++++++...
T Consensus 127 ~~l~~~i~~~~~~~~~~~~~i~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~ 179 (283)
T PLN02442 127 KELPKLLSDNFDQLDTSRASIFGHSMGGHGALTIYLKNPDKYKSVSAFAPIAN 179 (283)
T ss_pred HHHHHHHHHHHHhcCCCceEEEEEChhHHHHHHHHHhCchhEEEEEEECCccC
Confidence 33344444444455668899999999999999999999999999999998643
No 83
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=99.01 E-value=1.3e-09 Score=110.75 Aligned_cols=123 Identities=20% Similarity=0.189 Sum_probs=95.4
Q ss_pred EECCEEEEEEEcCCC----CCeEEEECCCCCChHH-----------HHHHHH---HHHhCCCEEEEEcCCCCC-CCCCCC
Q 007536 412 RWNGYQIQYTVAGKE----GPAILLVHGFGAFLEH-----------YRDNIY---DIADGGNRVWAITLLGFG-RSEKPN 472 (599)
Q Consensus 412 ~~~g~~l~y~~~g~~----~p~vlllHG~~~~~~~-----------w~~~~~---~l~~~g~~vi~~D~~G~G-~S~~~~ 472 (599)
.+++..|.|+.+|.- ..+||++||+.++.+. |+.++. .+-...|-||+.|..|.+ .|++|.
T Consensus 32 ~l~~~~vay~T~Gtln~~~~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~NvlG~c~GStgP~ 111 (368)
T COG2021 32 VLSDARVAYETYGTLNAEKDNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNVLGGCKGSTGPS 111 (368)
T ss_pred cccCcEEEEEecccccccCCceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEEecCCCCCCCCCCCC
Confidence 346788999999852 4689999999886543 333321 232235999999999886 444332
Q ss_pred -------------CCCCHHHHHHHHHHHHHHhCCCCEE-EEEeChHHHHHHHHHHhCCcccceEEEEcCCCCCCCc
Q 007536 473 -------------IVYTELMWSELLRDFTVEVVGEPVH-LIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIPE 534 (599)
Q Consensus 473 -------------~~~~~~~~~~~l~~~l~~l~~~~~~-lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~~~~~~~ 534 (599)
..+++.+++..-..++++++++++. +||-||||+.|++++..||++|+++|.|+++....+.
T Consensus 112 s~~p~g~~yg~~FP~~ti~D~V~aq~~ll~~LGI~~l~avvGgSmGGMqaleWa~~yPd~V~~~i~ia~~~r~s~~ 187 (368)
T COG2021 112 SINPGGKPYGSDFPVITIRDMVRAQRLLLDALGIKKLAAVVGGSMGGMQALEWAIRYPDRVRRAIPIATAARLSAQ 187 (368)
T ss_pred CcCCCCCccccCCCcccHHHHHHHHHHHHHhcCcceEeeeeccChHHHHHHHHHHhChHHHhhhheecccccCCHH
Confidence 2367888888888889999999976 9999999999999999999999999999998765543
No 84
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.97 E-value=2.6e-09 Score=107.30 Aligned_cols=117 Identities=20% Similarity=0.297 Sum_probs=100.7
Q ss_pred EECCEEEEEEEcCCC-------CCeEEEECCCCCChHHHHHHHHHHHhC---------CCEEEEEcCCCCCCCCCCC-CC
Q 007536 412 RWNGYQIQYTVAGKE-------GPAILLVHGFGAFLEHYRDNIYDIADG---------GNRVWAITLLGFGRSEKPN-IV 474 (599)
Q Consensus 412 ~~~g~~l~y~~~g~~-------~p~vlllHG~~~~~~~w~~~~~~l~~~---------g~~vi~~D~~G~G~S~~~~-~~ 474 (599)
++.|.+||+.+..+. --|+|++|||+|+-..+..+++.|.+. -|.||++.+||+|.|+.+. ..
T Consensus 130 eIeGL~iHFlhvk~p~~k~~k~v~PlLl~HGwPGsv~EFykfIPlLT~p~~hg~~~d~~FEVI~PSlPGygwSd~~sk~G 209 (469)
T KOG2565|consen 130 EIEGLKIHFLHVKPPQKKKKKKVKPLLLLHGWPGSVREFYKFIPLLTDPKRHGNESDYAFEVIAPSLPGYGWSDAPSKTG 209 (469)
T ss_pred hhcceeEEEEEecCCccccCCcccceEEecCCCchHHHHHhhhhhhcCccccCCccceeEEEeccCCCCcccCcCCccCC
Confidence 457888888765432 248999999999999999999988764 2799999999999999865 37
Q ss_pred CCHHHHHHHHHHHHHHhCCCCEEEEEeChHHHHHHHHHHhCCcccceEEEEcCC
Q 007536 475 YTELMWSELLRDFTVEVVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSA 528 (599)
Q Consensus 475 ~~~~~~~~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~ 528 (599)
++....|..+..++-.++.+++.|-|-.||+.|+..+|..+|++|.|+-+-.+.
T Consensus 210 Fn~~a~ArvmrkLMlRLg~nkffiqGgDwGSiI~snlasLyPenV~GlHlnm~~ 263 (469)
T KOG2565|consen 210 FNAAATARVMRKLMLRLGYNKFFIQGGDWGSIIGSNLASLYPENVLGLHLNMCF 263 (469)
T ss_pred ccHHHHHHHHHHHHHHhCcceeEeecCchHHHHHHHHHhhcchhhhHhhhcccc
Confidence 788888999999999999999999999999999999999999999998776554
No 85
>PRK11460 putative hydrolase; Provisional
Probab=98.93 E-value=8.1e-09 Score=102.29 Aligned_cols=103 Identities=15% Similarity=0.056 Sum_probs=70.0
Q ss_pred CCCeEEEECCCCCChHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCC-----------CCCCCH---HHHHHHHHH----H
Q 007536 426 EGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKP-----------NIVYTE---LMWSELLRD----F 487 (599)
Q Consensus 426 ~~p~vlllHG~~~~~~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~-----------~~~~~~---~~~~~~l~~----~ 487 (599)
..|.|||+||+|++...|..+++.|...++.+..++.+|...+... ...... ....+.+.+ +
T Consensus 15 ~~~~vIlLHG~G~~~~~~~~l~~~l~~~~~~~~~i~~~g~~~~~~~~g~~W~~~~~~~~~~~~~~~~~~~~~l~~~i~~~ 94 (232)
T PRK11460 15 AQQLLLLFHGVGDNPVAMGEIGSWFAPAFPDALVVSVGGPEPSGNGAGRQWFSVQGITEDNRQARVAAIMPTFIETVRYW 94 (232)
T ss_pred CCcEEEEEeCCCCChHHHHHHHHHHHHHCCCCEEECCCCCCCcCCCCCcccccCCCCCccchHHHHHHHHHHHHHHHHHH
Confidence 3678999999999999999999999876555555555554322110 001111 121222222 2
Q ss_pred HHHhCC--CCEEEEEeChHHHHHHHHHHhCCcccceEEEEcCC
Q 007536 488 TVEVVG--EPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSA 528 (599)
Q Consensus 488 l~~l~~--~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~ 528 (599)
.+..+. ++++|+|||+||.+++.++..+|+.+.++|.+++.
T Consensus 95 ~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~sg~ 137 (232)
T PRK11460 95 QQQSGVGASATALIGFSQGAIMALEAVKAEPGLAGRVIAFSGR 137 (232)
T ss_pred HHhcCCChhhEEEEEECHHHHHHHHHHHhCCCcceEEEEeccc
Confidence 333333 57999999999999999999999888888888764
No 86
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=98.93 E-value=9e-09 Score=101.43 Aligned_cols=100 Identities=21% Similarity=0.158 Sum_probs=82.3
Q ss_pred CeEEEECCCCCChHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCC-CEEEEEeChHHH
Q 007536 428 PAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNIVYTELMWSELLRDFTVEVVGE-PVHLIGNSIGGY 506 (599)
Q Consensus 428 p~vlllHG~~~~~~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~-~~~lvGhS~Gg~ 506 (599)
++|+|+||.+++...|.++++.|...++.|++++.+|.+... ....+++.+++...+.|.....+ +++|+|||+||.
T Consensus 1 ~~lf~~p~~gG~~~~y~~la~~l~~~~~~v~~i~~~~~~~~~--~~~~si~~la~~y~~~I~~~~~~gp~~L~G~S~Gg~ 78 (229)
T PF00975_consen 1 RPLFCFPPAGGSASSYRPLARALPDDVIGVYGIEYPGRGDDE--PPPDSIEELASRYAEAIRARQPEGPYVLAGWSFGGI 78 (229)
T ss_dssp -EEEEESSTTCSGGGGHHHHHHHTTTEEEEEEECSTTSCTTS--HEESSHHHHHHHHHHHHHHHTSSSSEEEEEETHHHH
T ss_pred CeEEEEcCCccCHHHHHHHHHhCCCCeEEEEEEecCCCCCCC--CCCCCHHHHHHHHHHHhhhhCCCCCeeehccCccHH
Confidence 479999999999999999999997634999999999998332 23468888888877777766554 999999999999
Q ss_pred HHHHHHHh---CCcccceEEEEcCCC
Q 007536 507 FVAIVACL---WPAVVKSVVLINSAG 529 (599)
Q Consensus 507 ia~~~a~~---~p~~v~~lvli~~~~ 529 (599)
+|+++|.+ ....|..|+++++..
T Consensus 79 lA~E~A~~Le~~G~~v~~l~liD~~~ 104 (229)
T PF00975_consen 79 LAFEMARQLEEAGEEVSRLILIDSPP 104 (229)
T ss_dssp HHHHHHHHHHHTT-SESEEEEESCSS
T ss_pred HHHHHHHHHHHhhhccCceEEecCCC
Confidence 99999875 345699999999753
No 87
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=98.90 E-value=1.4e-08 Score=99.78 Aligned_cols=105 Identities=16% Similarity=0.179 Sum_probs=73.7
Q ss_pred CCCeEEEECCCCCChHHHHHHHHHHHh--------CCCEEEEEcCCCCCCCCCCCCCCCHHH----HHHHHHHHHHHh--
Q 007536 426 EGPAILLVHGFGAFLEHYRDNIYDIAD--------GGNRVWAITLLGFGRSEKPNIVYTELM----WSELLRDFTVEV-- 491 (599)
Q Consensus 426 ~~p~vlllHG~~~~~~~w~~~~~~l~~--------~g~~vi~~D~~G~G~S~~~~~~~~~~~----~~~~l~~~l~~l-- 491 (599)
.+.+||||||.+++...|+.+...+.+ ..++++++|+......-. ...+.. ..+.+..+++.+
T Consensus 3 ~g~pVlFIhG~~Gs~~q~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~~~---g~~l~~q~~~~~~~i~~i~~~~~~ 79 (225)
T PF07819_consen 3 SGIPVLFIHGNAGSYKQVRSLASELQRKALLNDNSSHFDFFTVDFNEELSAFH---GRTLQRQAEFLAEAIKYILELYKS 79 (225)
T ss_pred CCCEEEEECcCCCCHhHHHHHHHHHhhhhhhccCccceeEEEeccCccccccc---cccHHHHHHHHHHHHHHHHHhhhh
Confidence 378999999999999888887766521 148899999876532211 122333 344455555544
Q ss_pred ---CCCCEEEEEeChHHHHHHHHHHhCC---cccceEEEEcCCCCCCC
Q 007536 492 ---VGEPVHLIGNSIGGYFVAIVACLWP---AVVKSVVLINSAGNVIP 533 (599)
Q Consensus 492 ---~~~~~~lvGhS~Gg~ia~~~a~~~p---~~v~~lvli~~~~~~~~ 533 (599)
..++++||||||||.+|..++...+ +.|+.+|.++++....|
T Consensus 80 ~~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tPh~g~~ 127 (225)
T PF07819_consen 80 NRPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTPHRGSP 127 (225)
T ss_pred ccCCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCCCCCcc
Confidence 3478999999999999988776543 47999999999765443
No 88
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=98.88 E-value=3.4e-09 Score=98.99 Aligned_cols=122 Identities=16% Similarity=0.162 Sum_probs=90.0
Q ss_pred EEEEECCEEEEEEEcCC--CCCeEEEECCCCCChHHHHHHHHHHH-hCCCEEEEEcCCCCCCCCCCCCCCCHHHHHHHHH
Q 007536 409 RIWRWNGYQIQYTVAGK--EGPAILLVHGFGAFLEHYRDNIYDIA-DGGNRVWAITLLGFGRSEKPNIVYTELMWSELLR 485 (599)
Q Consensus 409 ~~~~~~g~~l~y~~~g~--~~p~vlllHG~~~~~~~w~~~~~~l~-~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~ 485 (599)
...+-|.++++-...-. ..|+++++||..++..+.-+++..+- .-+.+|+.+++||+|.|++.+..-.+..-++.+.
T Consensus 58 ~l~T~D~vtL~a~~~~~E~S~pTlLyfh~NAGNmGhr~~i~~~fy~~l~mnv~ivsYRGYG~S~GspsE~GL~lDs~avl 137 (300)
T KOG4391|consen 58 ELRTRDKVTLDAYLMLSESSRPTLLYFHANAGNMGHRLPIARVFYVNLKMNVLIVSYRGYGKSEGSPSEEGLKLDSEAVL 137 (300)
T ss_pred EEEcCcceeEeeeeecccCCCceEEEEccCCCcccchhhHHHHHHHHcCceEEEEEeeccccCCCCccccceeccHHHHH
Confidence 34455777776543322 48999999999999888777776654 4479999999999999998654333332233333
Q ss_pred HHHHH---hCCCCEEEEEeChHHHHHHHHHHhCCcccceEEEEcCCCC
Q 007536 486 DFTVE---VVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGN 530 (599)
Q Consensus 486 ~~l~~---l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~~~ 530 (599)
+.+.. +...++++.|.|+||++|+.+|++..+++.++|+-++...
T Consensus 138 dyl~t~~~~dktkivlfGrSlGGAvai~lask~~~ri~~~ivENTF~S 185 (300)
T KOG4391|consen 138 DYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSDRISAIIVENTFLS 185 (300)
T ss_pred HHHhcCccCCcceEEEEecccCCeeEEEeeccchhheeeeeeechhcc
Confidence 33322 2336899999999999999999999999999999998643
No 89
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.87 E-value=2.1e-08 Score=97.37 Aligned_cols=100 Identities=22% Similarity=0.220 Sum_probs=75.2
Q ss_pred CCeEEEECCCCCChHHHHHHHHHHHh-CCCEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC--CCCEEEEEeCh
Q 007536 427 GPAILLVHGFGAFLEHYRDNIYDIAD-GGNRVWAITLLGFGRSEKPNIVYTELMWSELLRDFTVEVV--GEPVHLIGNSI 503 (599)
Q Consensus 427 ~p~vlllHG~~~~~~~w~~~~~~l~~-~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~--~~~~~lvGhS~ 503 (599)
.+++|+.||...+......+.-.|.. -+++++.+|++|+|.|.+.+.....-.-.+.+-+.+.+-. .++++|+|+||
T Consensus 60 ~~~lly~hGNa~Dlgq~~~~~~~l~~~ln~nv~~~DYSGyG~S~G~psE~n~y~Di~avye~Lr~~~g~~~~Iil~G~Si 139 (258)
T KOG1552|consen 60 HPTLLYSHGNAADLGQMVELFKELSIFLNCNVVSYDYSGYGRSSGKPSERNLYADIKAVYEWLRNRYGSPERIILYGQSI 139 (258)
T ss_pred ceEEEEcCCcccchHHHHHHHHHHhhcccceEEEEecccccccCCCcccccchhhHHHHHHHHHhhcCCCceEEEEEecC
Confidence 48899999997765544444445544 2699999999999999886654433333333334444433 48899999999
Q ss_pred HHHHHHHHHHhCCcccceEEEEcCC
Q 007536 504 GGYFVAIVACLWPAVVKSVVLINSA 528 (599)
Q Consensus 504 Gg~ia~~~a~~~p~~v~~lvli~~~ 528 (599)
|...++.+|+++| ++++||.+|.
T Consensus 140 Gt~~tv~Lasr~~--~~alVL~SPf 162 (258)
T KOG1552|consen 140 GTVPTVDLASRYP--LAAVVLHSPF 162 (258)
T ss_pred CchhhhhHhhcCC--cceEEEeccc
Confidence 9999999999998 9999999985
No 90
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=98.86 E-value=1.6e-07 Score=92.15 Aligned_cols=169 Identities=15% Similarity=0.090 Sum_probs=119.9
Q ss_pred EEEECCEEEEEEEcCCC---CCeEEEECCCCCChHH-HHHH-----HHHHHhCCCEEEEEcCCCCCCC--CCCCC--CCC
Q 007536 410 IWRWNGYQIQYTVAGKE---GPAILLVHGFGAFLEH-YRDN-----IYDIADGGNRVWAITLLGFGRS--EKPNI--VYT 476 (599)
Q Consensus 410 ~~~~~g~~l~y~~~g~~---~p~vlllHG~~~~~~~-w~~~-----~~~l~~~g~~vi~~D~~G~G~S--~~~~~--~~~ 476 (599)
-|+..-..++....|+. +|++|=.|.+|.+... |..+ +..+..+ |-++-+|.|||-.- .-|.+ ..+
T Consensus 26 ~V~T~~G~v~V~V~Gd~~~~kpaiiTyhDlglN~~scFq~ff~~p~m~ei~~~-fcv~HV~~PGqe~gAp~~p~~y~yPs 104 (326)
T KOG2931|consen 26 DVETAHGVVHVTVYGDPKGNKPAIITYHDLGLNHKSCFQGFFNFPDMAEILEH-FCVYHVDAPGQEDGAPSFPEGYPYPS 104 (326)
T ss_pred eeccccccEEEEEecCCCCCCceEEEecccccchHhHhHHhhcCHhHHHHHhh-eEEEecCCCccccCCccCCCCCCCCC
Confidence 33333345777777753 6788888999988765 6654 5667776 99999999999543 22333 458
Q ss_pred HHHHHHHHHHHHHHhCCCCEEEEEeChHHHHHHHHHHhCCcccceEEEEcCCCCCCCcchhhhhhhhhhhcChhhHHHHH
Q 007536 477 ELMWSELLRDFTVEVVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIPEYSFLQFSNERQASGPIRLGAQL 556 (599)
Q Consensus 477 ~~~~~~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 556 (599)
++++++++..+++.++.+.++-+|--.|+.|...+|..||++|.|||||++.+... .|+.|....+
T Consensus 105 md~LAd~l~~VL~~f~lk~vIg~GvGAGAyIL~rFAl~hp~rV~GLvLIn~~~~a~--------------gwiew~~~K~ 170 (326)
T KOG2931|consen 105 MDDLADMLPEVLDHFGLKSVIGMGVGAGAYILARFALNHPERVLGLVLINCDPCAK--------------GWIEWAYNKV 170 (326)
T ss_pred HHHHHHHHHHHHHhcCcceEEEecccccHHHHHHHHhcChhheeEEEEEecCCCCc--------------hHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999864422 1222222222
Q ss_pred HHH------HHHHHHHHHHHhhCCCCCcccCHHHHHHHHHhhc
Q 007536 557 LLF------YLRLNISNFVKQCYPTRRERADDWLISEMLRAVS 593 (599)
Q Consensus 557 ~~~------~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~ 593 (599)
... ......+-++...|+.....-..+++++|.+.+.
T Consensus 171 ~s~~l~~~Gmt~~~~d~ll~H~Fg~e~~~~~~diVq~Yr~~l~ 213 (326)
T KOG2931|consen 171 SSNLLYYYGMTQGVKDYLLAHHFGKEELGNNSDIVQEYRQHLG 213 (326)
T ss_pred HHHHHHhhchhhhHHHHHHHHHhccccccccHHHHHHHHHHHH
Confidence 211 1122344455566765555667788888877553
No 91
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=98.78 E-value=1.9e-07 Score=92.99 Aligned_cols=120 Identities=20% Similarity=0.175 Sum_probs=85.3
Q ss_pred EEEECCEEEEEEEcCCC---CCeEEEECCCCCChHH-HHHH-----HHHHHhCCCEEEEEcCCCCCCCC--CCCC--CCC
Q 007536 410 IWRWNGYQIQYTVAGKE---GPAILLVHGFGAFLEH-YRDN-----IYDIADGGNRVWAITLLGFGRSE--KPNI--VYT 476 (599)
Q Consensus 410 ~~~~~g~~l~y~~~g~~---~p~vlllHG~~~~~~~-w~~~-----~~~l~~~g~~vi~~D~~G~G~S~--~~~~--~~~ 476 (599)
.++..-..|++...|+. +|++|-.|-.|.+... |..+ ...+.++ |.++=+|.||+..-. -|.+ ..+
T Consensus 3 ~v~t~~G~v~V~v~G~~~~~kp~ilT~HDvGlNh~scF~~ff~~~~m~~i~~~-f~i~Hi~aPGqe~ga~~~p~~y~yPs 81 (283)
T PF03096_consen 3 DVETPYGSVHVTVQGDPKGNKPAILTYHDVGLNHKSCFQGFFNFEDMQEILQN-FCIYHIDAPGQEEGAATLPEGYQYPS 81 (283)
T ss_dssp EEEETTEEEEEEEESS--TTS-EEEEE--TT--HHHHCHHHHCSHHHHHHHTT-SEEEEEE-TTTSTT-----TT-----
T ss_pred eeccCceEEEEEEEecCCCCCceEEEeccccccchHHHHHHhcchhHHHHhhc-eEEEEEeCCCCCCCcccccccccccC
Confidence 34455567777777753 6889999999988766 7665 5566665 999999999996533 2333 458
Q ss_pred HHHHHHHHHHHHHHhCCCCEEEEEeChHHHHHHHHHHhCCcccceEEEEcCCCC
Q 007536 477 ELMWSELLRDFTVEVVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGN 530 (599)
Q Consensus 477 ~~~~~~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~~~ 530 (599)
++++++++.++++.++++.++-+|--.||.|...+|..||++|.|+|||++.+.
T Consensus 82 md~LAe~l~~Vl~~f~lk~vIg~GvGAGAnIL~rfAl~~p~~V~GLiLvn~~~~ 135 (283)
T PF03096_consen 82 MDQLAEMLPEVLDHFGLKSVIGFGVGAGANILARFALKHPERVLGLILVNPTCT 135 (283)
T ss_dssp HHHHHCTHHHHHHHHT---EEEEEETHHHHHHHHHHHHSGGGEEEEEEES---S
T ss_pred HHHHHHHHHHHHHhCCccEEEEEeeccchhhhhhccccCccceeEEEEEecCCC
Confidence 999999999999999999999999999999999999999999999999999654
No 92
>PRK10162 acetyl esterase; Provisional
Probab=98.77 E-value=1.1e-07 Score=98.97 Aligned_cols=104 Identities=15% Similarity=0.117 Sum_probs=74.6
Q ss_pred CCeEEEECCCC---CChHHHHHHHHHHHh-CCCEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC--CCEEEEE
Q 007536 427 GPAILLVHGFG---AFLEHYRDNIYDIAD-GGNRVWAITLLGFGRSEKPNIVYTELMWSELLRDFTVEVVG--EPVHLIG 500 (599)
Q Consensus 427 ~p~vlllHG~~---~~~~~w~~~~~~l~~-~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~--~~~~lvG 500 (599)
.|.||++||++ ++...|..++..|+. .|+.|+.+|+|.......+....+.....+++.+..+.+++ ++++|+|
T Consensus 81 ~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~Vv~vdYrlape~~~p~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G 160 (318)
T PRK10162 81 QATLFYLHGGGFILGNLDTHDRIMRLLASYSGCTVIGIDYTLSPEARFPQAIEEIVAVCCYFHQHAEDYGINMSRIGFAG 160 (318)
T ss_pred CCEEEEEeCCcccCCCchhhhHHHHHHHHHcCCEEEEecCCCCCCCCCCCcHHHHHHHHHHHHHhHHHhCCChhHEEEEE
Confidence 67899999976 566778888888887 48999999999665433222111222233344444455654 5899999
Q ss_pred eChHHHHHHHHHHhC------CcccceEEEEcCCCC
Q 007536 501 NSIGGYFVAIVACLW------PAVVKSVVLINSAGN 530 (599)
Q Consensus 501 hS~Gg~ia~~~a~~~------p~~v~~lvli~~~~~ 530 (599)
+|+||.+|+.++... +.++.++|++.+...
T Consensus 161 ~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~ 196 (318)
T PRK10162 161 DSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLYG 196 (318)
T ss_pred ECHHHHHHHHHHHHHHhcCCCccChhheEEECCccC
Confidence 999999999988752 357999999988644
No 93
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=98.72 E-value=7e-08 Score=103.47 Aligned_cols=96 Identities=24% Similarity=0.235 Sum_probs=74.7
Q ss_pred CCChHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCC--CCCHHHHHHHHHHHHHHhCCCCEEEEEeChHHHHHHHHHHh
Q 007536 437 GAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNI--VYTELMWSELLRDFTVEVVGEPVHLIGNSIGGYFVAIVACL 514 (599)
Q Consensus 437 ~~~~~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~--~~~~~~~~~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~ 514 (599)
......|..+++.|.+.||.+ ..|++|+|++..... ....+.+.+.+.++.+..+..+++||||||||.+++.++..
T Consensus 104 ~~~~~~~~~li~~L~~~GY~~-~~dL~g~gYDwR~~~~~~~~~~~Lk~lIe~~~~~~g~~kV~LVGHSMGGlva~~fl~~ 182 (440)
T PLN02733 104 LDEVYYFHDMIEQLIKWGYKE-GKTLFGFGYDFRQSNRLPETMDGLKKKLETVYKASGGKKVNIISHSMGGLLVKCFMSL 182 (440)
T ss_pred cchHHHHHHHHHHHHHcCCcc-CCCcccCCCCccccccHHHHHHHHHHHHHHHHHHcCCCCEEEEEECHhHHHHHHHHHH
Confidence 355688999999999998855 899999999876532 12244555566666666677899999999999999999998
Q ss_pred CCcc----cceEEEEcCCCCCCC
Q 007536 515 WPAV----VKSVVLINSAGNVIP 533 (599)
Q Consensus 515 ~p~~----v~~lvli~~~~~~~~ 533 (599)
+|+. |+++|+++++....+
T Consensus 183 ~p~~~~k~I~~~I~la~P~~Gs~ 205 (440)
T PLN02733 183 HSDVFEKYVNSWIAIAAPFQGAP 205 (440)
T ss_pred CCHhHHhHhccEEEECCCCCCCc
Confidence 8864 799999988755443
No 94
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=98.72 E-value=4.3e-07 Score=91.74 Aligned_cols=104 Identities=24% Similarity=0.322 Sum_probs=87.6
Q ss_pred CCeEEEECCCCCChHHHHHHHHHHHhC---CCEEEEEcCCCCCCCCCC------CCCCCHHHHHHHHHHHHHHhC-----
Q 007536 427 GPAILLVHGFGAFLEHYRDNIYDIADG---GNRVWAITLLGFGRSEKP------NIVYTELMWSELLRDFTVEVV----- 492 (599)
Q Consensus 427 ~p~vlllHG~~~~~~~w~~~~~~l~~~---g~~vi~~D~~G~G~S~~~------~~~~~~~~~~~~l~~~l~~l~----- 492 (599)
...+|||+|.+|-...|.+++..|.+. .+.|+++.+.||-.++.. ...|+++++.+...+++++..
T Consensus 2 ~~li~~IPGNPGlv~fY~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~~~~~~~sL~~QI~hk~~~i~~~~~~~~~ 81 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVEFYEEFLSALYEKLNPQFEILGISHAGHSTSPSNSKFSPNGRLFSLQDQIEHKIDFIKELIPQKNK 81 (266)
T ss_pred cEEEEEECCCCChHHHHHHHHHHHHHhCCCCCeeEEecCCCCcCCcccccccCCCCccCHHHHHHHHHHHHHHHhhhhcC
Confidence 356899999999999999999888743 699999999999877654 247899988887777776543
Q ss_pred -CCCEEEEEeChHHHHHHHHHHhCC---cccceEEEEcCCCC
Q 007536 493 -GEPVHLIGNSIGGYFVAIVACLWP---AVVKSVVLINSAGN 530 (599)
Q Consensus 493 -~~~~~lvGhS~Gg~ia~~~a~~~p---~~v~~lvli~~~~~ 530 (599)
..+++|+|||+|++|++++..+.+ .+|.+++++-|+..
T Consensus 82 ~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi~ 123 (266)
T PF10230_consen 82 PNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTIE 123 (266)
T ss_pred CCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCccc
Confidence 357999999999999999999999 78999999998744
No 95
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=98.70 E-value=1e-07 Score=99.71 Aligned_cols=124 Identities=21% Similarity=0.250 Sum_probs=75.8
Q ss_pred eeEEEEEECCEEEEEE-Ec--CCC-CCeEEEECCCCCChHH-HHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCCCHHHH
Q 007536 406 YSTRIWRWNGYQIQYT-VA--GKE-GPAILLVHGFGAFLEH-YRDNIYDIADGGNRVWAITLLGFGRSEKPNIVYTELMW 480 (599)
Q Consensus 406 ~~~~~~~~~g~~l~y~-~~--g~~-~p~vlllHG~~~~~~~-w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~ 480 (599)
++.-.+...|..|... +. +.+ .|+||++-|+-+.... |..+.+.|+.+|+.++++|+||.|.|..-....+.+.+
T Consensus 165 i~~v~iP~eg~~I~g~LhlP~~~~p~P~VIv~gGlDs~qeD~~~l~~~~l~~rGiA~LtvDmPG~G~s~~~~l~~D~~~l 244 (411)
T PF06500_consen 165 IEEVEIPFEGKTIPGYLHLPSGEKPYPTVIVCGGLDSLQEDLYRLFRDYLAPRGIAMLTVDMPGQGESPKWPLTQDSSRL 244 (411)
T ss_dssp EEEEEEEETTCEEEEEEEESSSSS-EEEEEEE--TTS-GGGGHHHHHCCCHHCT-EEEEE--TTSGGGTTT-S-S-CCHH
T ss_pred cEEEEEeeCCcEEEEEEEcCCCCCCCCEEEEeCCcchhHHHHHHHHHHHHHhCCCEEEEEccCCCcccccCCCCcCHHHH
Confidence 4444455566655432 22 212 2455565666555555 44555678889999999999999998642211222334
Q ss_pred HHHHHHHHHHhC---CCCEEEEEeChHHHHHHHHHHhCCcccceEEEEcCCC
Q 007536 481 SELLRDFTVEVV---GEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAG 529 (599)
Q Consensus 481 ~~~l~~~l~~l~---~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~~ 529 (599)
...|.+.+.... ..+|.++|.|+||.+|..+|..++++++++|.++++.
T Consensus 245 ~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~~RlkavV~~Ga~v 296 (411)
T PF06500_consen 245 HQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALEDPRLKAVVALGAPV 296 (411)
T ss_dssp HHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHTTTT-SEEEEES---
T ss_pred HHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhcccceeeEeeeCchH
Confidence 445555555544 2689999999999999999999999999999999864
No 96
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=98.70 E-value=9e-08 Score=94.44 Aligned_cols=113 Identities=19% Similarity=0.215 Sum_probs=79.6
Q ss_pred EEEEEcCCCCCeEEEECCCCCChHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh------
Q 007536 418 IQYTVAGKEGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNIVYTELMWSELLRDFTVEV------ 491 (599)
Q Consensus 418 l~y~~~g~~~p~vlllHG~~~~~~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l------ 491 (599)
|.|......=|.|||+||+......|..+++.++.+||-|+++|+...+...............+++.+-+...
T Consensus 8 v~~P~~~g~yPVv~f~~G~~~~~s~Ys~ll~hvAShGyIVV~~d~~~~~~~~~~~~~~~~~~vi~Wl~~~L~~~l~~~v~ 87 (259)
T PF12740_consen 8 VYYPSSAGTYPVVLFLHGFLLINSWYSQLLEHVASHGYIVVAPDLYSIGGPDDTDEVASAAEVIDWLAKGLESKLPLGVK 87 (259)
T ss_pred EEecCCCCCcCEEEEeCCcCCCHHHHHHHHHHHHhCceEEEEecccccCCCCcchhHHHHHHHHHHHHhcchhhcccccc
Confidence 44433332358899999999888888999999999999999999776544221111112223333333322211
Q ss_pred -CCCCEEEEEeChHHHHHHHHHHhC-----CcccceEEEEcCCCC
Q 007536 492 -VGEPVHLIGNSIGGYFVAIVACLW-----PAVVKSVVLINSAGN 530 (599)
Q Consensus 492 -~~~~~~lvGhS~Gg~ia~~~a~~~-----p~~v~~lvli~~~~~ 530 (599)
...++.|.|||-||-+|+.++..+ +.+++++|+++|.-.
T Consensus 88 ~D~s~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPVdG 132 (259)
T PF12740_consen 88 PDFSKLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPVDG 132 (259)
T ss_pred ccccceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEeccccc
Confidence 236899999999999999999987 568999999999753
No 97
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=98.60 E-value=1.1e-06 Score=88.28 Aligned_cols=102 Identities=18% Similarity=0.154 Sum_probs=69.1
Q ss_pred CCeEEEECCCCCChH--HHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHH----hCCCCEEEEE
Q 007536 427 GPAILLVHGFGAFLE--HYRDNIYDIADGGNRVWAITLLGFGRSEKPNIVYTELMWSELLRDFTVE----VVGEPVHLIG 500 (599)
Q Consensus 427 ~p~vlllHG~~~~~~--~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~----l~~~~~~lvG 500 (599)
.|.||++||+.|+++ .-+.+++.+.++||.|++++.||||.+.-......-..+.+|+..+++. ....++..+|
T Consensus 75 ~P~vVl~HGL~G~s~s~y~r~L~~~~~~rg~~~Vv~~~Rgcs~~~n~~p~~yh~G~t~D~~~~l~~l~~~~~~r~~~avG 154 (345)
T COG0429 75 KPLVVLFHGLEGSSNSPYARGLMRALSRRGWLVVVFHFRGCSGEANTSPRLYHSGETEDIRFFLDWLKARFPPRPLYAVG 154 (345)
T ss_pred CceEEEEeccCCCCcCHHHHHHHHHHHhcCCeEEEEecccccCCcccCcceecccchhHHHHHHHHHHHhCCCCceEEEE
Confidence 689999999966543 3456788999999999999999999886422111112233445544443 3458999999
Q ss_pred eChHHHHHHHHHHhCCc--ccceEEEEcCC
Q 007536 501 NSIGGYFVAIVACLWPA--VVKSVVLINSA 528 (599)
Q Consensus 501 hS~Gg~ia~~~a~~~p~--~v~~lvli~~~ 528 (599)
.|+||.+...+..+..+ .+.+.+.++.+
T Consensus 155 ~SLGgnmLa~ylgeeg~d~~~~aa~~vs~P 184 (345)
T COG0429 155 FSLGGNMLANYLGEEGDDLPLDAAVAVSAP 184 (345)
T ss_pred ecccHHHHHHHHHhhccCcccceeeeeeCH
Confidence 99999555555554432 35666666553
No 98
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=98.60 E-value=2.1e-07 Score=114.87 Aligned_cols=101 Identities=17% Similarity=0.134 Sum_probs=87.9
Q ss_pred CCCeEEEECCCCCChHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC-CCEEEEEeChH
Q 007536 426 EGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNIVYTELMWSELLRDFTVEVVG-EPVHLIGNSIG 504 (599)
Q Consensus 426 ~~p~vlllHG~~~~~~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~-~~~~lvGhS~G 504 (599)
.+++++|+||++++...|..+++.|.. +++|+++|++|+|.+. ...++++.+++++.+.++.+.. .+++++|||||
T Consensus 1067 ~~~~l~~lh~~~g~~~~~~~l~~~l~~-~~~v~~~~~~g~~~~~--~~~~~l~~la~~~~~~i~~~~~~~p~~l~G~S~G 1143 (1296)
T PRK10252 1067 DGPTLFCFHPASGFAWQFSVLSRYLDP-QWSIYGIQSPRPDGPM--QTATSLDEVCEAHLATLLEQQPHGPYHLLGYSLG 1143 (1296)
T ss_pred CCCCeEEecCCCCchHHHHHHHHhcCC-CCcEEEEECCCCCCCC--CCCCCHHHHHHHHHHHHHhhCCCCCEEEEEechh
Confidence 368899999999999999999999976 5999999999999663 3357999999999998887654 58999999999
Q ss_pred HHHHHHHHHh---CCcccceEEEEcCCC
Q 007536 505 GYFVAIVACL---WPAVVKSVVLINSAG 529 (599)
Q Consensus 505 g~ia~~~a~~---~p~~v~~lvli~~~~ 529 (599)
|.+|..+|.+ +++++..++++++..
T Consensus 1144 g~vA~e~A~~l~~~~~~v~~l~l~~~~~ 1171 (1296)
T PRK10252 1144 GTLAQGIAARLRARGEEVAFLGLLDTWP 1171 (1296)
T ss_pred hHHHHHHHHHHHHcCCceeEEEEecCCC
Confidence 9999999985 578999999998743
No 99
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=98.59 E-value=1.7e-06 Score=90.00 Aligned_cols=102 Identities=16% Similarity=0.198 Sum_probs=71.3
Q ss_pred CCCeEEEECCCCCChH--HHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCC-CC---CHHHHHHHHHHHHHHhCCCCEEEE
Q 007536 426 EGPAILLVHGFGAFLE--HYRDNIYDIADGGNRVWAITLLGFGRSEKPNI-VY---TELMWSELLRDFTVEVVGEPVHLI 499 (599)
Q Consensus 426 ~~p~vlllHG~~~~~~--~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~-~~---~~~~~~~~l~~~l~~l~~~~~~lv 499 (599)
..|.||++||+.++++ .-+.++..+.+.||+|++++.||+|.|.-... -| ..+++...+..+-......++..+
T Consensus 124 ~~P~vvilpGltg~S~~~YVr~lv~~a~~~G~r~VVfN~RG~~g~~LtTpr~f~ag~t~Dl~~~v~~i~~~~P~a~l~av 203 (409)
T KOG1838|consen 124 TDPIVVILPGLTGGSHESYVRHLVHEAQRKGYRVVVFNHRGLGGSKLTTPRLFTAGWTEDLREVVNHIKKRYPQAPLFAV 203 (409)
T ss_pred CCcEEEEecCCCCCChhHHHHHHHHHHHhCCcEEEEECCCCCCCCccCCCceeecCCHHHHHHHHHHHHHhCCCCceEEE
Confidence 3689999999976654 34567777788899999999999999875332 12 233444444443344455789999
Q ss_pred EeChHHHHHHHHHHhCCcc--cceEEEEcC
Q 007536 500 GNSIGGYFVAIVACLWPAV--VKSVVLINS 527 (599)
Q Consensus 500 GhS~Gg~ia~~~a~~~p~~--v~~lvli~~ 527 (599)
|.||||.+...+..+..++ +.+.+.++.
T Consensus 204 G~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~ 233 (409)
T KOG1838|consen 204 GFSMGGNILTNYLGEEGDNTPLIAAVAVCN 233 (409)
T ss_pred EecchHHHHHHHhhhccCCCCceeEEEEec
Confidence 9999999999998875432 444444444
No 100
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.52 E-value=7.9e-07 Score=88.33 Aligned_cols=100 Identities=19% Similarity=0.168 Sum_probs=83.9
Q ss_pred CeEEEECCCCCChHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC-CCCEEEEEeChHHH
Q 007536 428 PAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNIVYTELMWSELLRDFTVEVV-GEPVHLIGNSIGGY 506 (599)
Q Consensus 428 p~vlllHG~~~~~~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~-~~~~~lvGhS~Gg~ 506 (599)
|+|.++|+.+|....|.++...|... ..|+.++.||+|.-. ...-+++++++...+.|.+.. ..+++|+|+|+||.
T Consensus 1 ~pLF~fhp~~G~~~~~~~L~~~l~~~-~~v~~l~a~g~~~~~--~~~~~l~~~a~~yv~~Ir~~QP~GPy~L~G~S~GG~ 77 (257)
T COG3319 1 PPLFCFHPAGGSVLAYAPLAAALGPL-LPVYGLQAPGYGAGE--QPFASLDDMAAAYVAAIRRVQPEGPYVLLGWSLGGA 77 (257)
T ss_pred CCEEEEcCCCCcHHHHHHHHHHhccC-ceeeccccCcccccc--cccCCHHHHHHHHHHHHHHhCCCCCEEEEeeccccH
Confidence 68999999999999999999999886 999999999998632 234578888777666666654 47999999999999
Q ss_pred HHHHHHHh---CCcccceEEEEcCCCC
Q 007536 507 FVAIVACL---WPAVVKSVVLINSAGN 530 (599)
Q Consensus 507 ia~~~a~~---~p~~v~~lvli~~~~~ 530 (599)
+|+.+|.+ ..+.|..|+++++...
T Consensus 78 vA~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 78 VAFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred HHHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 99999876 4467999999999765
No 101
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=98.51 E-value=6.9e-07 Score=83.89 Aligned_cols=103 Identities=17% Similarity=0.199 Sum_probs=80.4
Q ss_pred CCCeEEEECCCCCChH--HHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCC-C--EEEEE
Q 007536 426 EGPAILLVHGFGAFLE--HYRDNIYDIADGGNRVWAITLLGFGRSEKPNIVYTELMWSELLRDFTVEVVGE-P--VHLIG 500 (599)
Q Consensus 426 ~~p~vlllHG~~~~~~--~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~-~--~~lvG 500 (599)
+...||++||+-.+.. ....++..|.+.|+.++.+|.+|.|.|.+.-..-.....++|+..++..+... + -+++|
T Consensus 32 s~e~vvlcHGfrS~Kn~~~~~~vA~~~e~~gis~fRfDF~GnGeS~gsf~~Gn~~~eadDL~sV~q~~s~~nr~v~vi~g 111 (269)
T KOG4667|consen 32 STEIVVLCHGFRSHKNAIIMKNVAKALEKEGISAFRFDFSGNGESEGSFYYGNYNTEADDLHSVIQYFSNSNRVVPVILG 111 (269)
T ss_pred CceEEEEeeccccccchHHHHHHHHHHHhcCceEEEEEecCCCCcCCccccCcccchHHHHHHHHHHhccCceEEEEEEe
Confidence 4678999999987654 34567888999999999999999999986432112223458999988887652 2 57899
Q ss_pred eChHHHHHHHHHHhCCcccceEEEEcCCC
Q 007536 501 NSIGGYFVAIVACLWPAVVKSVVLINSAG 529 (599)
Q Consensus 501 hS~Gg~ia~~~a~~~p~~v~~lvli~~~~ 529 (599)
||-||.+++.+|.++++ ++-+|.+++..
T Consensus 112 HSkGg~Vvl~ya~K~~d-~~~viNcsGRy 139 (269)
T KOG4667|consen 112 HSKGGDVVLLYASKYHD-IRNVINCSGRY 139 (269)
T ss_pred ecCccHHHHHHHHhhcC-chheEEccccc
Confidence 99999999999999987 78888777653
No 102
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=98.51 E-value=1.3e-07 Score=91.78 Aligned_cols=100 Identities=18% Similarity=0.166 Sum_probs=59.9
Q ss_pred CeEEEECCCCC-ChHHHHHHHHHHHhCCCE---EEEEcCCCCCCCCCCCC-C---CCHHHHHHHHHHHHHHhCCCCEEEE
Q 007536 428 PAILLVHGFGA-FLEHYRDNIYDIADGGNR---VWAITLLGFGRSEKPNI-V---YTELMWSELLRDFTVEVVGEPVHLI 499 (599)
Q Consensus 428 p~vlllHG~~~-~~~~w~~~~~~l~~~g~~---vi~~D~~G~G~S~~~~~-~---~~~~~~~~~l~~~l~~l~~~~~~lv 499 (599)
.||||+||.++ ....|..+++.|.++||. ++++++-....+..... . -+..++++.|.+++..-+. +|.||
T Consensus 2 ~PVVlVHG~~~~~~~~w~~~~~~l~~~GY~~~~vya~tyg~~~~~~~~~~~~~~~~~~~~l~~fI~~Vl~~TGa-kVDIV 80 (219)
T PF01674_consen 2 RPVVLVHGTGGNAYSNWSTLAPYLKAAGYCDSEVYALTYGSGNGSPSVQNAHMSCESAKQLRAFIDAVLAYTGA-KVDIV 80 (219)
T ss_dssp --EEEE--TTTTTCGGCCHHHHHHHHTT--CCCEEEE--S-CCHHTHHHHHHB-HHHHHHHHHHHHHHHHHHT---EEEE
T ss_pred CCEEEECCCCcchhhCHHHHHHHHHHcCCCcceeEeccCCCCCCCCcccccccchhhHHHHHHHHHHHHHhhCC-EEEEE
Confidence 58999999998 567899999999999999 79998854433221110 0 0123455566666666677 99999
Q ss_pred EeChHHHHHHHHHHhC-------------CcccceEEEEcCC
Q 007536 500 GNSIGGYFVAIVACLW-------------PAVVKSVVLINSA 528 (599)
Q Consensus 500 GhS~Gg~ia~~~a~~~-------------p~~v~~lvli~~~ 528 (599)
||||||.++..+.... +..|...|.++++
T Consensus 81 gHS~G~~iaR~yi~~~~~~d~~~~lg~~~~~~v~t~v~lag~ 122 (219)
T PF01674_consen 81 GHSMGGTIARYYIKGGGGADKVVNLGPPLTSKVGTFVGLAGA 122 (219)
T ss_dssp EETCHHHHHHHHHHHCTGGGTEEE----GGG-EEEEEEES--
T ss_pred EcCCcCHHHHHHHHHcCCCCcccCcccccccccccccccccc
Confidence 9999999998876543 2345666666643
No 103
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=98.48 E-value=4.5e-07 Score=85.16 Aligned_cols=89 Identities=19% Similarity=0.255 Sum_probs=62.6
Q ss_pred EEEECCCCCCh-HHHHHHHHH-HHhCCCEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCEEEEEeChHHHH
Q 007536 430 ILLVHGFGAFL-EHYRDNIYD-IADGGNRVWAITLLGFGRSEKPNIVYTELMWSELLRDFTVEVVGEPVHLIGNSIGGYF 507 (599)
Q Consensus 430 vlllHG~~~~~-~~w~~~~~~-l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~lvGhS~Gg~i 507 (599)
|+++||++++. .+|.+..+. |... ++|-.+|+ + ..+.+.|...+.+.+... .++++|||||+|+..
T Consensus 1 v~IvhG~~~s~~~HW~~wl~~~l~~~-~~V~~~~~------~----~P~~~~W~~~l~~~i~~~-~~~~ilVaHSLGc~~ 68 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQPWLERQLENS-VRVEQPDW------D----NPDLDEWVQALDQAIDAI-DEPTILVAHSLGCLT 68 (171)
T ss_dssp EEEE--TTSSTTTSTHHHHHHHHTTS-EEEEEC--------T----S--HHHHHHHHHHCCHC--TTTEEEEEETHHHHH
T ss_pred CEEeCCCCCCCccHHHHHHHHhCCCC-eEEecccc------C----CCCHHHHHHHHHHHHhhc-CCCeEEEEeCHHHHH
Confidence 68999998874 578887554 5444 77777666 1 236777887777766654 367999999999999
Q ss_pred HHHHH-HhCCcccceEEEEcCCCC
Q 007536 508 VAIVA-CLWPAVVKSVVLINSAGN 530 (599)
Q Consensus 508 a~~~a-~~~p~~v~~lvli~~~~~ 530 (599)
++.++ .....+|.|++|++++-.
T Consensus 69 ~l~~l~~~~~~~v~g~lLVAp~~~ 92 (171)
T PF06821_consen 69 ALRWLAEQSQKKVAGALLVAPFDP 92 (171)
T ss_dssp HHHHHHHTCCSSEEEEEEES--SC
T ss_pred HHHHHhhcccccccEEEEEcCCCc
Confidence 99999 778889999999999743
No 104
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=98.48 E-value=7.8e-07 Score=96.71 Aligned_cols=103 Identities=15% Similarity=0.133 Sum_probs=83.1
Q ss_pred CCeEEEECCCCCChHHH-----HHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh----CCCCEE
Q 007536 427 GPAILLVHGFGAFLEHY-----RDNIYDIADGGNRVWAITLLGFGRSEKPNIVYTELMWSELLRDFTVEV----VGEPVH 497 (599)
Q Consensus 427 ~p~vlllHG~~~~~~~w-----~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l----~~~~~~ 497 (599)
+.|||+++.+-...+.| +.+++.|.++||+|+++|+++-+.++ ...+++++.+.+.+.++.+ +.++++
T Consensus 215 ~~PLLIVPp~INK~YIlDL~P~~SlVr~lv~qG~~VflIsW~nP~~~~---r~~~ldDYv~~i~~Ald~V~~~tG~~~vn 291 (560)
T TIGR01839 215 ARPLLVVPPQINKFYIFDLSPEKSFVQYCLKNQLQVFIISWRNPDKAH---REWGLSTYVDALKEAVDAVRAITGSRDLN 291 (560)
T ss_pred CCcEEEechhhhhhheeecCCcchHHHHHHHcCCeEEEEeCCCCChhh---cCCCHHHHHHHHHHHHHHHHHhcCCCCee
Confidence 67999999998777777 47899999999999999999877654 2456677666666655544 458899
Q ss_pred EEEeChHHHHHHH----HHHhCCc-ccceEEEEcCCCCCC
Q 007536 498 LIGNSIGGYFVAI----VACLWPA-VVKSVVLINSAGNVI 532 (599)
Q Consensus 498 lvGhS~Gg~ia~~----~a~~~p~-~v~~lvli~~~~~~~ 532 (599)
++|+||||.+++. +++.+++ +|++++++.+.....
T Consensus 292 l~GyC~GGtl~a~~~a~~aA~~~~~~V~sltllatplDf~ 331 (560)
T TIGR01839 292 LLGACAGGLTCAALVGHLQALGQLRKVNSLTYLVSLLDST 331 (560)
T ss_pred EEEECcchHHHHHHHHHHHhcCCCCceeeEEeeecccccC
Confidence 9999999999997 7888886 799999998865533
No 105
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.47 E-value=8.9e-07 Score=85.60 Aligned_cols=103 Identities=14% Similarity=0.139 Sum_probs=82.9
Q ss_pred CCeEEEECCCCCChHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHH-HhCCCCEEEEEeChHH
Q 007536 427 GPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNIVYTELMWSELLRDFTV-EVVGEPVHLIGNSIGG 505 (599)
Q Consensus 427 ~p~vlllHG~~~~~~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~-~l~~~~~~lvGhS~Gg 505 (599)
++.++++|=.|+++..|+.+...|.. .+.++++.+||+|.--..+...+++.+++.+...+. -....++.++||||||
T Consensus 7 ~~~L~cfP~AGGsa~~fr~W~~~lp~-~iel~avqlPGR~~r~~ep~~~di~~Lad~la~el~~~~~d~P~alfGHSmGa 85 (244)
T COG3208 7 RLRLFCFPHAGGSASLFRSWSRRLPA-DIELLAVQLPGRGDRFGEPLLTDIESLADELANELLPPLLDAPFALFGHSMGA 85 (244)
T ss_pred CceEEEecCCCCCHHHHHHHHhhCCc-hhheeeecCCCcccccCCcccccHHHHHHHHHHHhccccCCCCeeecccchhH
Confidence 56799999999999999999998877 499999999999976555556788889988888776 3555799999999999
Q ss_pred HHHHHHHHhCC---cccceEEEEcCCCC
Q 007536 506 YFVAIVACLWP---AVVKSVVLINSAGN 530 (599)
Q Consensus 506 ~ia~~~a~~~p---~~v~~lvli~~~~~ 530 (599)
++|.++|.+.. ....++.+.+....
T Consensus 86 ~lAfEvArrl~~~g~~p~~lfisg~~aP 113 (244)
T COG3208 86 MLAFEVARRLERAGLPPRALFISGCRAP 113 (244)
T ss_pred HHHHHHHHHHHHcCCCcceEEEecCCCC
Confidence 99999998632 23666777666543
No 106
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=98.43 E-value=1.5e-07 Score=97.64 Aligned_cols=107 Identities=20% Similarity=0.312 Sum_probs=64.6
Q ss_pred CCCeEEEECCCCCCh--HHHH-HHHHHHHh---CCCEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh----C--C
Q 007536 426 EGPAILLVHGFGAFL--EHYR-DNIYDIAD---GGNRVWAITLLGFGRSEKPNIVYTELMWSELLRDFTVEV----V--G 493 (599)
Q Consensus 426 ~~p~vlllHG~~~~~--~~w~-~~~~~l~~---~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l----~--~ 493 (599)
..|++|++|||.++. ..|- .+...+.. .+++||++|+...-...............+.|..+|..+ + .
T Consensus 70 ~~pt~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~a~~~Y~~a~~n~~~vg~~la~~l~~L~~~~g~~~ 149 (331)
T PF00151_consen 70 SKPTVIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRGASNNYPQAVANTRLVGRQLAKFLSFLINNFGVPP 149 (331)
T ss_dssp TSEEEEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHHHSS-HHHHHHHHHHHHHHHHHHHHHHHHHH---G
T ss_pred CCCeEEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEEEcchhhccccccchhhhHHHHHHHHHHHHHHHHhhcCCCh
Confidence 478999999998877 3554 44555544 379999999963322110000111223344444444433 2 3
Q ss_pred CCEEEEEeChHHHHHHHHHHhCCc--ccceEEEEcCCCCCC
Q 007536 494 EPVHLIGNSIGGYFVAIVACLWPA--VVKSVVLINSAGNVI 532 (599)
Q Consensus 494 ~~~~lvGhS~Gg~ia~~~a~~~p~--~v~~lvli~~~~~~~ 532 (599)
++++|||||+||.||..++..... +|.+++.++|++...
T Consensus 150 ~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAgP~F 190 (331)
T PF00151_consen 150 ENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAGPLF 190 (331)
T ss_dssp GGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B-TTT
T ss_pred hHEEEEeeccchhhhhhhhhhccCcceeeEEEecCcccccc
Confidence 789999999999999988887776 899999999987643
No 107
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=98.43 E-value=6.6e-07 Score=86.64 Aligned_cols=104 Identities=21% Similarity=0.228 Sum_probs=75.6
Q ss_pred CCeEEEECCCCCChHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC-------CCCEEEE
Q 007536 427 GPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNIVYTELMWSELLRDFTVEVV-------GEPVHLI 499 (599)
Q Consensus 427 ~p~vlllHG~~~~~~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~-------~~~~~lv 499 (599)
=|.|+|+||+......|..++..++.+||-|+++++-..-.-+.....-+....++++..-+..+. +.++.++
T Consensus 46 yPVilF~HG~~l~ns~Ys~lL~HIASHGfIVVAPQl~~~~~p~~~~Ei~~aa~V~~WL~~gL~~~Lp~~V~~nl~klal~ 125 (307)
T PF07224_consen 46 YPVILFLHGFNLYNSFYSQLLAHIASHGFIVVAPQLYTLFPPDGQDEIKSAASVINWLPEGLQHVLPENVEANLSKLALS 125 (307)
T ss_pred ccEEEEeechhhhhHHHHHHHHHHhhcCeEEEechhhcccCCCchHHHHHHHHHHHHHHhhhhhhCCCCcccccceEEEe
Confidence 578999999999999999999999999999999999753211111111122233444444444332 3789999
Q ss_pred EeChHHHHHHHHHHhCC--cccceEEEEcCCCC
Q 007536 500 GNSIGGYFVAIVACLWP--AVVKSVVLINSAGN 530 (599)
Q Consensus 500 GhS~Gg~ia~~~a~~~p--~~v~~lvli~~~~~ 530 (599)
|||.||-.|..+|..+. -.+.+||.++|...
T Consensus 126 GHSrGGktAFAlALg~a~~lkfsaLIGiDPV~G 158 (307)
T PF07224_consen 126 GHSRGGKTAFALALGYATSLKFSALIGIDPVAG 158 (307)
T ss_pred ecCCccHHHHHHHhcccccCchhheecccccCC
Confidence 99999999999999873 35899999998644
No 108
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=98.42 E-value=1.9e-05 Score=81.61 Aligned_cols=100 Identities=27% Similarity=0.251 Sum_probs=59.7
Q ss_pred CCeEEEECCCCCChHH--------------H----HHHHHHHHhCCCEEEEEcCCCCCCCCCCCC-----CCCHHHHHH-
Q 007536 427 GPAILLVHGFGAFLEH--------------Y----RDNIYDIADGGNRVWAITLLGFGRSEKPNI-----VYTELMWSE- 482 (599)
Q Consensus 427 ~p~vlllHG~~~~~~~--------------w----~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~-----~~~~~~~~~- 482 (599)
-|+||++||-++..+. | ..+...|+++||-|+++|.+|+|....... .++...++.
T Consensus 115 ~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LAk~GYVvla~D~~g~GER~~~e~~~~~~~~~~~~la~~ 194 (390)
T PF12715_consen 115 FPAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLAKRGYVVLAPDALGFGERGDMEGAAQGSNYDCQALARN 194 (390)
T ss_dssp EEEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHHHTTTSEEEEE--TTSGGG-SSCCCTTTTS--HHHHHHH
T ss_pred CCEEEEeCCCCCCcccccCCcccccccchhhccccccHHHHHHhCCCEEEEEccccccccccccccccccchhHHHHHHH
Confidence 4689999998776533 1 135778999999999999999998754221 222222222
Q ss_pred --------------HHHHHHHHhC------CCCEEEEEeChHHHHHHHHHHhCCcccceEEEEcC
Q 007536 483 --------------LLRDFTVEVV------GEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINS 527 (599)
Q Consensus 483 --------------~l~~~l~~l~------~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~ 527 (599)
+....++.+. .++|.++|+||||..++.+|+.. ++|++.|..+-
T Consensus 195 ~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~a~~LaALD-dRIka~v~~~~ 258 (390)
T PF12715_consen 195 LLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMGGYRAWWLAALD-DRIKATVANGY 258 (390)
T ss_dssp HHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGHHHHHHHHHH--TT--EEEEES-
T ss_pred HHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecccHHHHHHHHHcc-hhhHhHhhhhh
Confidence 1112233332 26899999999999999999987 57988877654
No 109
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=98.41 E-value=1.8e-06 Score=97.83 Aligned_cols=119 Identities=19% Similarity=0.151 Sum_probs=86.2
Q ss_pred EEEEEECCEEEEEEEcCCC--C-----CeEEEECCCCCChHH--HHHHHHHHHhCCCEEEEEcCCCCCC---C--CC---
Q 007536 408 TRIWRWNGYQIQYTVAGKE--G-----PAILLVHGFGAFLEH--YRDNIYDIADGGNRVWAITLLGFGR---S--EK--- 470 (599)
Q Consensus 408 ~~~~~~~g~~l~y~~~g~~--~-----p~vlllHG~~~~~~~--w~~~~~~l~~~g~~vi~~D~~G~G~---S--~~--- 470 (599)
+.+-..||.+|+.....+. . |.||++||.+..... |....+.|+..||.|+.++.||.+. . +.
T Consensus 368 ~~~~~~dG~~i~~~l~~P~~~~~~k~yP~i~~~hGGP~~~~~~~~~~~~q~~~~~G~~V~~~n~RGS~GyG~~F~~~~~~ 447 (620)
T COG1506 368 VTYKSNDGETIHGWLYKPPGFDPRKKYPLIVYIHGGPSAQVGYSFNPEIQVLASAGYAVLAPNYRGSTGYGREFADAIRG 447 (620)
T ss_pred EEEEcCCCCEEEEEEecCCCCCCCCCCCEEEEeCCCCccccccccchhhHHHhcCCeEEEEeCCCCCCccHHHHHHhhhh
Confidence 3455568888887765442 1 789999999765443 6677889999999999999996643 2 11
Q ss_pred CCCCCCHHHHHHHHHHHHHHhCC---CCEEEEEeChHHHHHHHHHHhCCcccceEEEEcCC
Q 007536 471 PNIVYTELMWSELLRDFTVEVVG---EPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSA 528 (599)
Q Consensus 471 ~~~~~~~~~~~~~l~~~l~~l~~---~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~ 528 (599)
..+....+++.+.+. ++.+.+. +++.|.|||.||.+++..+...| .+++.|.+.+.
T Consensus 448 ~~g~~~~~D~~~~~~-~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~~-~f~a~~~~~~~ 506 (620)
T COG1506 448 DWGGVDLEDLIAAVD-ALVKLPLVDPERIGITGGSYGGYMTLLAATKTP-RFKAAVAVAGG 506 (620)
T ss_pred ccCCccHHHHHHHHH-HHHhCCCcChHHeEEeccChHHHHHHHHHhcCc-hhheEEeccCc
Confidence 112345666666666 5555543 58999999999999999999888 67777776664
No 110
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=98.41 E-value=8.2e-07 Score=86.92 Aligned_cols=105 Identities=18% Similarity=0.109 Sum_probs=63.7
Q ss_pred CCCeEEEECCCCCChHHHHHHHH-HHHhCCCEEEEEcCCC------CCC---CCCC------CCCCC---HHHHHHHHHH
Q 007536 426 EGPAILLVHGFGAFLEHYRDNIY-DIADGGNRVWAITLLG------FGR---SEKP------NIVYT---ELMWSELLRD 486 (599)
Q Consensus 426 ~~p~vlllHG~~~~~~~w~~~~~-~l~~~g~~vi~~D~~G------~G~---S~~~------~~~~~---~~~~~~~l~~ 486 (599)
..+.|||+||+|++...|..... .+...+.+++.+.-|- .|. +..+ ....+ +...++.+.+
T Consensus 13 ~~~lvi~LHG~G~~~~~~~~~~~~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i~~s~~~l~~ 92 (216)
T PF02230_consen 13 AKPLVILLHGYGDSEDLFALLAELNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGIEESAERLDE 92 (216)
T ss_dssp -SEEEEEE--TTS-HHHHHHHHHHHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHHHHHHHHHHH
T ss_pred CceEEEEECCCCCCcchhHHHHhhcccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHHHHHHHHHHH
Confidence 47889999999999977766655 2223357788776542 233 2211 11112 2233445555
Q ss_pred HHHHh---C--CCCEEEEEeChHHHHHHHHHHhCCcccceEEEEcCCCC
Q 007536 487 FTVEV---V--GEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGN 530 (599)
Q Consensus 487 ~l~~l---~--~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~~~ 530 (599)
+++.. + .++++|+|+|.||++|+.++.++|+.+.++|++++...
T Consensus 93 li~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~~ 141 (216)
T PF02230_consen 93 LIDEEVAYGIDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYLP 141 (216)
T ss_dssp HHHHHHHTT--GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---T
T ss_pred HHHHHHHcCCChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeecccc
Confidence 55532 2 26899999999999999999999999999999998643
No 111
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=98.39 E-value=2.9e-06 Score=82.60 Aligned_cols=104 Identities=18% Similarity=0.236 Sum_probs=72.5
Q ss_pred CCeEEEECCCCCChHHHHHH--HHHHHh-CCCEEEEEcCCCCCCCC---------CCCCCCCHHHHHHHHHHHHHHhCC-
Q 007536 427 GPAILLVHGFGAFLEHYRDN--IYDIAD-GGNRVWAITLLGFGRSE---------KPNIVYTELMWSELLRDFTVEVVG- 493 (599)
Q Consensus 427 ~p~vlllHG~~~~~~~w~~~--~~~l~~-~g~~vi~~D~~G~G~S~---------~~~~~~~~~~~~~~l~~~l~~l~~- 493 (599)
.|.||++||.+++...+... ...+++ +||-|+.|+........ .....-....++..+.++.....+
T Consensus 16 ~PLVv~LHG~~~~a~~~~~~s~~~~lAd~~GfivvyP~~~~~~~~~~cw~w~~~~~~~g~~d~~~i~~lv~~v~~~~~iD 95 (220)
T PF10503_consen 16 VPLVVVLHGCGQSAEDFAAGSGWNALADREGFIVVYPEQSRRANPQGCWNWFSDDQQRGGGDVAFIAALVDYVAARYNID 95 (220)
T ss_pred CCEEEEeCCCCCCHHHHHhhcCHHHHhhcCCeEEEcccccccCCCCCcccccccccccCccchhhHHHHHHhHhhhcccC
Confidence 47899999999998876543 345554 48999999864221110 001111233444555555555555
Q ss_pred -CCEEEEEeChHHHHHHHHHHhCCcccceEEEEcCCCC
Q 007536 494 -EPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGN 530 (599)
Q Consensus 494 -~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~~~ 530 (599)
.+|++.|+|.||+++..++..||+.+.++.++++...
T Consensus 96 ~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG~~~ 133 (220)
T PF10503_consen 96 PSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSGVPY 133 (220)
T ss_pred CCceeeEEECHHHHHHHHHHHhCCccceEEEeeccccc
Confidence 6899999999999999999999999999998887643
No 112
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=98.33 E-value=4.5e-06 Score=83.41 Aligned_cols=100 Identities=27% Similarity=0.262 Sum_probs=71.8
Q ss_pred CCeEEEECCCCCChHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHH-HHHhCC--CCEEEEEeCh
Q 007536 427 GPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNIVYTELMWSELLRDF-TVEVVG--EPVHLIGNSI 503 (599)
Q Consensus 427 ~p~vlllHG~~~~~~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~-l~~l~~--~~~~lvGhS~ 503 (599)
...|++.-|..+--+. .++..-++.||.|+.+++|||+.|++.+.+......++.+.++ +..++. +.++|.|+|.
T Consensus 243 q~LvIC~EGNAGFYEv--G~m~tP~~lgYsvLGwNhPGFagSTG~P~p~n~~nA~DaVvQfAI~~Lgf~~edIilygWSI 320 (517)
T KOG1553|consen 243 QDLVICFEGNAGFYEV--GVMNTPAQLGYSVLGWNHPGFAGSTGLPYPVNTLNAADAVVQFAIQVLGFRQEDIILYGWSI 320 (517)
T ss_pred ceEEEEecCCccceEe--eeecChHHhCceeeccCCCCccccCCCCCcccchHHHHHHHHHHHHHcCCCccceEEEEeec
Confidence 4467788887654321 1222223458999999999999998765444444445555554 455554 7899999999
Q ss_pred HHHHHHHHHHhCCcccceEEEEcCCC
Q 007536 504 GGYFVAIVACLWPAVVKSVVLINSAG 529 (599)
Q Consensus 504 Gg~ia~~~a~~~p~~v~~lvli~~~~ 529 (599)
||..+..+|..||+ |+++|+-++.-
T Consensus 321 GGF~~~waAs~YPd-VkavvLDAtFD 345 (517)
T KOG1553|consen 321 GGFPVAWAASNYPD-VKAVVLDATFD 345 (517)
T ss_pred CCchHHHHhhcCCC-ceEEEeecchh
Confidence 99999999999997 99999887753
No 113
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=98.32 E-value=3.7e-06 Score=79.92 Aligned_cols=88 Identities=27% Similarity=0.316 Sum_probs=66.2
Q ss_pred EEEECCCCCChHHHHH--HHHHHHhCC--CEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCEEEEEeChHH
Q 007536 430 ILLVHGFGAFLEHYRD--NIYDIADGG--NRVWAITLLGFGRSEKPNIVYTELMWSELLRDFTVEVVGEPVHLIGNSIGG 505 (599)
Q Consensus 430 vlllHG~~~~~~~w~~--~~~~l~~~g--~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~lvGhS~Gg 505 (599)
||+|||+.++....+. +.+.+.+.+ ..++++|++ .......+.+.+++++...+.+.|||.||||
T Consensus 2 ilYlHGF~Ssp~S~Ka~~l~~~~~~~~~~~~~~~p~l~-----------~~p~~a~~~l~~~i~~~~~~~~~liGSSlGG 70 (187)
T PF05728_consen 2 ILYLHGFNSSPQSFKAQALKQYFAEHGPDIQYPCPDLP-----------PFPEEAIAQLEQLIEELKPENVVLIGSSLGG 70 (187)
T ss_pred eEEecCCCCCCCCHHHHHHHHHHHHhCCCceEECCCCC-----------cCHHHHHHHHHHHHHhCCCCCeEEEEEChHH
Confidence 7899999988766543 345566543 566777665 2345566777888888877779999999999
Q ss_pred HHHHHHHHhCCcccceEEEEcCCCCC
Q 007536 506 YFVAIVACLWPAVVKSVVLINSAGNV 531 (599)
Q Consensus 506 ~ia~~~a~~~p~~v~~lvli~~~~~~ 531 (599)
..|..+|.+++ +.+ |+|+|+..+
T Consensus 71 ~~A~~La~~~~--~~a-vLiNPav~p 93 (187)
T PF05728_consen 71 FYATYLAERYG--LPA-VLINPAVRP 93 (187)
T ss_pred HHHHHHHHHhC--CCE-EEEcCCCCH
Confidence 99999999886 444 999997553
No 114
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.32 E-value=2.3e-06 Score=81.43 Aligned_cols=116 Identities=18% Similarity=0.286 Sum_probs=79.0
Q ss_pred ECCEEEEEEEcCCC--CC-eEEEECCCCCChHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCC---CCCHHHHHH-HHH
Q 007536 413 WNGYQIQYTVAGKE--GP-AILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNI---VYTELMWSE-LLR 485 (599)
Q Consensus 413 ~~g~~l~y~~~g~~--~p-~vlllHG~~~~~~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~---~~~~~~~~~-~l~ 485 (599)
.||+.+.-..+... .+ -++.-.+.+.-...+++++..++++||.|+.+|+||.|.|..+.. .+...+|+. |+.
T Consensus 13 ~DG~~l~~~~~pA~~~~~g~~~va~a~Gv~~~fYRrfA~~a~~~Gf~Vlt~dyRG~g~S~p~~~~~~~~~~~DwA~~D~~ 92 (281)
T COG4757 13 PDGYSLPGQRFPADGKASGRLVVAGATGVGQYFYRRFAAAAAKAGFEVLTFDYRGIGQSRPASLSGSQWRYLDWARLDFP 92 (281)
T ss_pred CCCccCccccccCCCCCCCcEEecccCCcchhHhHHHHHHhhccCceEEEEecccccCCCccccccCccchhhhhhcchH
Confidence 36766655544432 23 345555566777888999999999999999999999999986443 356666643 444
Q ss_pred HHHHH----hCCCCEEEEEeChHHHHHHHHHHhCCcccceEEEEcCCCC
Q 007536 486 DFTVE----VVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGN 530 (599)
Q Consensus 486 ~~l~~----l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~~~ 530 (599)
+.++. +...+...|||||||.+. .++.+++ +..+....++...
T Consensus 93 aal~~~~~~~~~~P~y~vgHS~GGqa~-gL~~~~~-k~~a~~vfG~gag 139 (281)
T COG4757 93 AALAALKKALPGHPLYFVGHSFGGQAL-GLLGQHP-KYAAFAVFGSGAG 139 (281)
T ss_pred HHHHHHHhhCCCCceEEeeccccceee-cccccCc-ccceeeEeccccc
Confidence 44443 345789999999999876 4555666 5555555555443
No 115
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=98.29 E-value=3.9e-06 Score=82.14 Aligned_cols=101 Identities=18% Similarity=0.172 Sum_probs=69.4
Q ss_pred CCCeEEEECCCCCChHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCC---CC--C------CHHHHHHHHHHHHHHhC--
Q 007536 426 EGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPN---IV--Y------TELMWSELLRDFTVEVV-- 492 (599)
Q Consensus 426 ~~p~vlllHG~~~~~~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~---~~--~------~~~~~~~~l~~~l~~l~-- 492 (599)
+.|.||++|++.+-....+.+++.|+++||.|+++|+-+-....... .. + ..+...+++.+.++.+.
T Consensus 13 ~~~~Vvv~~d~~G~~~~~~~~ad~lA~~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~~~ 92 (218)
T PF01738_consen 13 PRPAVVVIHDIFGLNPNIRDLADRLAEEGYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPRPEQVAADLQAAVDYLRAQ 92 (218)
T ss_dssp SEEEEEEE-BTTBS-HHHHHHHHHHHHTT-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHSHHHHHHHHHHHHHHHHCT
T ss_pred CCCEEEEEcCCCCCchHHHHHHHHHHhcCCCEEecccccCCCCCccchhhHHHHHHHHHhhhHHHHHHHHHHHHHHHHhc
Confidence 36789999999887777788999999999999999986544311111 00 0 12334455555555442
Q ss_pred ----CCCEEEEEeChHHHHHHHHHHhCCcccceEEEEcC
Q 007536 493 ----GEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINS 527 (599)
Q Consensus 493 ----~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~ 527 (599)
.+++.++|+|+||.+++.+|... ..++++|..-+
T Consensus 93 ~~~~~~kig~vGfc~GG~~a~~~a~~~-~~~~a~v~~yg 130 (218)
T PF01738_consen 93 PEVDPGKIGVVGFCWGGKLALLLAARD-PRVDAAVSFYG 130 (218)
T ss_dssp TTCEEEEEEEEEETHHHHHHHHHHCCT-TTSSEEEEES-
T ss_pred cccCCCcEEEEEEecchHHhhhhhhhc-cccceEEEEcC
Confidence 25899999999999999998877 57999999887
No 116
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.26 E-value=1e-05 Score=80.11 Aligned_cols=102 Identities=20% Similarity=0.192 Sum_probs=78.1
Q ss_pred CeEEEECCCCCChHHHHHHHHHHHhCCCEEEEEcCCCC-CCCCCCC-C----------CCCHHHHHHHHHHHHHHhC---
Q 007536 428 PAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGF-GRSEKPN-I----------VYTELMWSELLRDFTVEVV--- 492 (599)
Q Consensus 428 p~vlllHG~~~~~~~w~~~~~~l~~~g~~vi~~D~~G~-G~S~~~~-~----------~~~~~~~~~~l~~~l~~l~--- 492 (599)
|.||++|++.+-....+.+++.|+..||.|+++|+-+. |.+.... . ..+......++.+.++.+.
T Consensus 28 P~VIv~hei~Gl~~~i~~~a~rlA~~Gy~v~~Pdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~~~~L~~~~ 107 (236)
T COG0412 28 PGVIVLHEIFGLNPHIRDVARRLAKAGYVVLAPDLYGRQGDPTDIEDEPAELETGLVERVDPAEVLADIDAALDYLARQP 107 (236)
T ss_pred CEEEEEecccCCchHHHHHHHHHHhCCcEEEechhhccCCCCCcccccHHHHhhhhhccCCHHHHHHHHHHHHHHHHhCC
Confidence 78999999999888999999999999999999999763 3332111 0 0122445556666666553
Q ss_pred ---CCCEEEEEeChHHHHHHHHHHhCCcccceEEEEcCCCC
Q 007536 493 ---GEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGN 530 (599)
Q Consensus 493 ---~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~~~ 530 (599)
.+++.++|+||||.+++.++...| .|++.|..-+...
T Consensus 108 ~~~~~~ig~~GfC~GG~~a~~~a~~~~-~v~a~v~fyg~~~ 147 (236)
T COG0412 108 QVDPKRIGVVGFCMGGGLALLAATRAP-EVKAAVAFYGGLI 147 (236)
T ss_pred CCCCceEEEEEEcccHHHHHHhhcccC-CccEEEEecCCCC
Confidence 367999999999999999999887 7999988887644
No 117
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=98.24 E-value=3.2e-06 Score=85.84 Aligned_cols=117 Identities=20% Similarity=0.091 Sum_probs=75.3
Q ss_pred CCEEEEEEEcCC------CCCeEEEECCCCCCh-HHHHHH---------HHHHHhCCCEEEEEcCCCCCCCCCCCCCCCH
Q 007536 414 NGYQIQYTVAGK------EGPAILLVHGFGAFL-EHYRDN---------IYDIADGGNRVWAITLLGFGRSEKPNIVYTE 477 (599)
Q Consensus 414 ~g~~l~y~~~g~------~~p~vlllHG~~~~~-~~w~~~---------~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~ 477 (599)
||++|+...+-| .-|+||..|+++.+. ...... ...++++||.|+..|.||+|.|++.......
T Consensus 1 DGv~L~adv~~P~~~~~~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~RG~g~S~G~~~~~~~ 80 (272)
T PF02129_consen 1 DGVRLAADVYRPGADGGGPFPVILTRTPYGKGDQTASDLAGANPGPPSARRPFAERGYAVVVQDVRGTGGSEGEFDPMSP 80 (272)
T ss_dssp TS-EEEEEEEEE--TTSSSEEEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-TTSTTS-S-B-TTSH
T ss_pred CCCEEEEEEEecCCCCCCcccEEEEccCcCCCCCcccchhhhhcccchhHHHHHhCCCEEEEECCcccccCCCccccCCh
Confidence 566666543322 146788889998653 222221 1138889999999999999999875533232
Q ss_pred HHHHHHHHHHHHHh---CC--CCEEEEEeChHHHHHHHHHHhCCcccceEEEEcCCCCC
Q 007536 478 LMWSELLRDFTVEV---VG--EPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNV 531 (599)
Q Consensus 478 ~~~~~~l~~~l~~l---~~--~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~~~~ 531 (599)
.-.+|..++|+-+ .. .+|-++|.|.+|..++.+|+..|..+++++...+....
T Consensus 81 -~e~~D~~d~I~W~~~Qpws~G~VGm~G~SY~G~~q~~~A~~~~p~LkAi~p~~~~~d~ 138 (272)
T PF02129_consen 81 -NEAQDGYDTIEWIAAQPWSNGKVGMYGISYGGFTQWAAAARRPPHLKAIVPQSGWSDL 138 (272)
T ss_dssp -HHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTTT-TTEEEEEEESE-SBT
T ss_pred -hHHHHHHHHHHHHHhCCCCCCeEEeeccCHHHHHHHHHHhcCCCCceEEEecccCCcc
Confidence 2344444554433 22 58999999999999999999888899999998875443
No 118
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=98.23 E-value=1.3e-05 Score=74.33 Aligned_cols=103 Identities=19% Similarity=0.151 Sum_probs=68.8
Q ss_pred CCeEEEECCC-----CCChHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCC-CCCHHHHHHHHHHHHHHhCC-CC-EEE
Q 007536 427 GPAILLVHGF-----GAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNI-VYTELMWSELLRDFTVEVVG-EP-VHL 498 (599)
Q Consensus 427 ~p~vlllHG~-----~~~~~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~-~~~~~~~~~~l~~~l~~l~~-~~-~~l 498 (599)
.|..|++|-. ..+...-..++..|.+.||.++.+|+||.|.|.+... .....+-+....+.+.+... .+ ..|
T Consensus 28 ~~iAli~HPHPl~gGtm~nkvv~~la~~l~~~G~atlRfNfRgVG~S~G~fD~GiGE~~Da~aaldW~~~~hp~s~~~~l 107 (210)
T COG2945 28 APIALICHPHPLFGGTMNNKVVQTLARALVKRGFATLRFNFRGVGRSQGEFDNGIGELEDAAAALDWLQARHPDSASCWL 107 (210)
T ss_pred CceEEecCCCccccCccCCHHHHHHHHHHHhCCceEEeecccccccccCcccCCcchHHHHHHHHHHHHhhCCCchhhhh
Confidence 5667888753 3333455677888999999999999999999987542 22211122223334444433 23 468
Q ss_pred EEeChHHHHHHHHHHhCCcccceEEEEcCCCC
Q 007536 499 IGNSIGGYFVAIVACLWPAVVKSVVLINSAGN 530 (599)
Q Consensus 499 vGhS~Gg~ia~~~a~~~p~~v~~lvli~~~~~ 530 (599)
.|+|+|+.|++.+|.+.|+ +...+.+.+...
T Consensus 108 ~GfSFGa~Ia~~la~r~~e-~~~~is~~p~~~ 138 (210)
T COG2945 108 AGFSFGAYIAMQLAMRRPE-ILVFISILPPIN 138 (210)
T ss_pred cccchHHHHHHHHHHhccc-ccceeeccCCCC
Confidence 9999999999999999876 555555555433
No 119
>COG0400 Predicted esterase [General function prediction only]
Probab=98.21 E-value=5.3e-06 Score=79.99 Aligned_cols=105 Identities=16% Similarity=0.132 Sum_probs=73.7
Q ss_pred CCeEEEECCCCCChHHHHHHHHHHHhCCCEEEEEcCC--CCCC----CCCCCCCCCH-------HHHHHHHHHHHHHhCC
Q 007536 427 GPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLL--GFGR----SEKPNIVYTE-------LMWSELLRDFTVEVVG 493 (599)
Q Consensus 427 ~p~vlllHG~~~~~~~w~~~~~~l~~~g~~vi~~D~~--G~G~----S~~~~~~~~~-------~~~~~~l~~~l~~l~~ 493 (599)
.|.||++||+|++...+-+....+..+ ++++.+--+ -.|. +......++. ..+++.+.....+.++
T Consensus 18 ~~~iilLHG~Ggde~~~~~~~~~~~P~-~~~is~rG~v~~~g~~~~f~~~~~~~~d~edl~~~~~~~~~~l~~~~~~~gi 96 (207)
T COG0400 18 APLLILLHGLGGDELDLVPLPELILPN-ATLVSPRGPVAENGGPRFFRRYDEGSFDQEDLDLETEKLAEFLEELAEEYGI 96 (207)
T ss_pred CcEEEEEecCCCChhhhhhhhhhcCCC-CeEEcCCCCccccCcccceeecCCCccchhhHHHHHHHHHHHHHHHHHHhCC
Confidence 567999999999999888866666654 666655221 0010 1111123332 3344555555566666
Q ss_pred --CCEEEEEeChHHHHHHHHHHhCCcccceEEEEcCCCCCC
Q 007536 494 --EPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVI 532 (599)
Q Consensus 494 --~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~~~~~ 532 (599)
++++++|+|-||.+++.+..++|+.++++|++++.....
T Consensus 97 ~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g~~~~~ 137 (207)
T COG0400 97 DSSRIILIGFSQGANIALSLGLTLPGLFAGAILFSGMLPLE 137 (207)
T ss_pred ChhheEEEecChHHHHHHHHHHhCchhhccchhcCCcCCCC
Confidence 789999999999999999999999999999999975544
No 120
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=98.21 E-value=3e-06 Score=82.65 Aligned_cols=89 Identities=18% Similarity=0.187 Sum_probs=60.0
Q ss_pred HHHHHHHHHhCCCEEEEEcCCCCCCCCC-----CCCCC---CHHHHHHHHHHHHHHhC--CCCEEEEEeChHHHHHHHHH
Q 007536 443 YRDNIYDIADGGNRVWAITLLGFGRSEK-----PNIVY---TELMWSELLRDFTVEVV--GEPVHLIGNSIGGYFVAIVA 512 (599)
Q Consensus 443 w~~~~~~l~~~g~~vi~~D~~G~G~S~~-----~~~~~---~~~~~~~~l~~~l~~l~--~~~~~lvGhS~Gg~ia~~~a 512 (599)
|......|+++||.|+.+|+||.+.... ..... ..++..+.+..+++... .+++.|+|||+||.+++.++
T Consensus 3 f~~~~~~la~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~ 82 (213)
T PF00326_consen 3 FNWNAQLLASQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLAA 82 (213)
T ss_dssp -SHHHHHHHTTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHHH
T ss_pred eeHHHHHHHhCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccchhh
Confidence 3455778889999999999999874321 11111 23333333333333322 27899999999999999999
Q ss_pred HhCCcccceEEEEcCCCCC
Q 007536 513 CLWPAVVKSVVLINSAGNV 531 (599)
Q Consensus 513 ~~~p~~v~~lvli~~~~~~ 531 (599)
.++|++++++|..++....
T Consensus 83 ~~~~~~f~a~v~~~g~~d~ 101 (213)
T PF00326_consen 83 TQHPDRFKAAVAGAGVSDL 101 (213)
T ss_dssp HHTCCGSSEEEEESE-SST
T ss_pred cccceeeeeeeccceecch
Confidence 9999999999999986543
No 121
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=98.19 E-value=2e-05 Score=70.76 Aligned_cols=103 Identities=19% Similarity=0.195 Sum_probs=76.7
Q ss_pred CeEEEECCCCCCh--HHHHHHHHHHHhCCCEEEEEcCCCCCCC-----CCCCC-CCCHHHHHHHHHHHHHHhCCCCEEEE
Q 007536 428 PAILLVHGFGAFL--EHYRDNIYDIADGGNRVWAITLLGFGRS-----EKPNI-VYTELMWSELLRDFTVEVVGEPVHLI 499 (599)
Q Consensus 428 p~vlllHG~~~~~--~~w~~~~~~l~~~g~~vi~~D~~G~G~S-----~~~~~-~~~~~~~~~~l~~~l~~l~~~~~~lv 499 (599)
-+||+-||.|++. .....++..|+.+|+.|..+++|-+-.- .+|+. .--...+...+.++...+...+.++-
T Consensus 15 ~tilLaHGAGasmdSt~m~~~a~~la~~G~~vaRfefpYma~Rrtg~rkPp~~~~t~~~~~~~~~aql~~~l~~gpLi~G 94 (213)
T COG3571 15 VTILLAHGAGASMDSTSMTAVAAALARRGWLVARFEFPYMAARRTGRRKPPPGSGTLNPEYIVAIAQLRAGLAEGPLIIG 94 (213)
T ss_pred EEEEEecCCCCCCCCHHHHHHHHHHHhCceeEEEeecchhhhccccCCCCcCccccCCHHHHHHHHHHHhcccCCceeec
Confidence 3688889998764 4677889999999999999999754221 12222 22234456666677777777899999
Q ss_pred EeChHHHHHHHHHHhCCcccceEEEEcCCCC
Q 007536 500 GNSIGGYFVAIVACLWPAVVKSVVLINSAGN 530 (599)
Q Consensus 500 GhS~Gg~ia~~~a~~~p~~v~~lvli~~~~~ 530 (599)
||||||-++-+.+..-...|.++++++-+..
T Consensus 95 GkSmGGR~aSmvade~~A~i~~L~clgYPfh 125 (213)
T COG3571 95 GKSMGGRVASMVADELQAPIDGLVCLGYPFH 125 (213)
T ss_pred cccccchHHHHHHHhhcCCcceEEEecCccC
Confidence 9999999999998876566999999987643
No 122
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=98.16 E-value=1e-05 Score=79.98 Aligned_cols=103 Identities=16% Similarity=0.123 Sum_probs=65.9
Q ss_pred CCCeEEEECCCCCChHHHHHHHHHHHh-CC--CEEEEEcCCCCCCCCC-CCCCCCHHHHHHHHHHHHHH----hCCCCEE
Q 007536 426 EGPAILLVHGFGAFLEHYRDNIYDIAD-GG--NRVWAITLLGFGRSEK-PNIVYTELMWSELLRDFTVE----VVGEPVH 497 (599)
Q Consensus 426 ~~p~vlllHG~~~~~~~w~~~~~~l~~-~g--~~vi~~D~~G~G~S~~-~~~~~~~~~~~~~l~~~l~~----l~~~~~~ 497 (599)
.+..+||+||+..+...--.-+..+.. .+ ..++.+.+|+.|.-.. .....+...-...+.+++.. .+..+++
T Consensus 17 ~~~vlvfVHGyn~~f~~a~~r~aql~~~~~~~~~~i~FsWPS~g~~~~Y~~d~~~a~~s~~~l~~~L~~L~~~~~~~~I~ 96 (233)
T PF05990_consen 17 DKEVLVFVHGYNNSFEDALRRAAQLAHDLGFPGVVILFSWPSDGSLLGYFYDRESARFSGPALARFLRDLARAPGIKRIH 96 (233)
T ss_pred CCeEEEEEeCCCCCHHHHHHHHHHHHHHhCCCceEEEEEcCCCCChhhhhhhhhhHHHHHHHHHHHHHHHHhccCCceEE
Confidence 477899999999986654332222322 22 3899999998875321 11111222233344444444 3568999
Q ss_pred EEEeChHHHHHHHHHHh----CC-----cccceEEEEcCC
Q 007536 498 LIGNSIGGYFVAIVACL----WP-----AVVKSVVLINSA 528 (599)
Q Consensus 498 lvGhS~Gg~ia~~~a~~----~p-----~~v~~lvli~~~ 528 (599)
|++||||+.+.+.+... .+ .++..+|+++|.
T Consensus 97 ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApD 136 (233)
T PF05990_consen 97 ILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPD 136 (233)
T ss_pred EEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCC
Confidence 99999999999887543 22 368899999875
No 123
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=98.15 E-value=3.8e-06 Score=81.56 Aligned_cols=98 Identities=20% Similarity=0.111 Sum_probs=60.8
Q ss_pred EEEECCCCC---ChHHHHHHHHHHHh-CCCEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHH-----hCCCCEEEEE
Q 007536 430 ILLVHGFGA---FLEHYRDNIYDIAD-GGNRVWAITLLGFGRSEKPNIVYTELMWSELLRDFTVE-----VVGEPVHLIG 500 (599)
Q Consensus 430 vlllHG~~~---~~~~w~~~~~~l~~-~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~-----l~~~~~~lvG 500 (599)
||++||++- +......++..++. .|+.|+.+|+|=..... .+-.+++..+.+.-+++. ...++++|+|
T Consensus 1 v~~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~~~~Yrl~p~~~---~p~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G 77 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESHWPFAARLAAERGFVVVSIDYRLAPEAP---FPAALEDVKAAYRWLLKNADKLGIDPERIVLIG 77 (211)
T ss_dssp EEEE--STTTSCGTTTHHHHHHHHHHHHTSEEEEEE---TTTSS---TTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEEE
T ss_pred CEEECCcccccCChHHHHHHHHHHHhhccEEEEEeecccccccc---ccccccccccceeeeccccccccccccceEEee
Confidence 799999863 33334455666664 79999999999432211 111233444444444443 2237899999
Q ss_pred eChHHHHHHHHHHhCCc----ccceEEEEcCCCC
Q 007536 501 NSIGGYFVAIVACLWPA----VVKSVVLINSAGN 530 (599)
Q Consensus 501 hS~Gg~ia~~~a~~~p~----~v~~lvli~~~~~ 530 (599)
+|.||.+|+.++....+ .++++++++|...
T Consensus 78 ~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~d 111 (211)
T PF07859_consen 78 DSAGGHLALSLALRARDRGLPKPKGIILISPWTD 111 (211)
T ss_dssp ETHHHHHHHHHHHHHHHTTTCHESEEEEESCHSS
T ss_pred cccccchhhhhhhhhhhhcccchhhhhccccccc
Confidence 99999999999875433 4899999999543
No 124
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=98.14 E-value=2.7e-05 Score=74.93 Aligned_cols=113 Identities=18% Similarity=0.110 Sum_probs=70.4
Q ss_pred CCEEEEEEEcCCC------CCeEEEECCCCCChHHHHHHHHHHHhCCCEEEEEcCCCC-CCCCCCCCCCCHHHHHHHHHH
Q 007536 414 NGYQIQYTVAGKE------GPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGF-GRSEKPNIVYTELMWSELLRD 486 (599)
Q Consensus 414 ~g~~l~y~~~g~~------~p~vlllHG~~~~~~~w~~~~~~l~~~g~~vi~~D~~G~-G~S~~~~~~~~~~~~~~~l~~ 486 (599)
+|..|+..+..|+ .++||+.+|++.....+..++.+|+..||+|+.+|.--| |.|++.-..+++....+++..
T Consensus 11 ~~~~I~vwet~P~~~~~~~~~tiliA~Gf~rrmdh~agLA~YL~~NGFhViRyDsl~HvGlSsG~I~eftms~g~~sL~~ 90 (294)
T PF02273_consen 11 DGRQIRVWETRPKNNEPKRNNTILIAPGFARRMDHFAGLAEYLSANGFHVIRYDSLNHVGLSSGDINEFTMSIGKASLLT 90 (294)
T ss_dssp TTEEEEEEEE---TTS---S-EEEEE-TT-GGGGGGHHHHHHHHTTT--EEEE---B-------------HHHHHHHHHH
T ss_pred CCCEEEEeccCCCCCCcccCCeEEEecchhHHHHHHHHHHHHHhhCCeEEEeccccccccCCCCChhhcchHHhHHHHHH
Confidence 6788887765542 478999999999999999999999999999999999876 999887778888888777776
Q ss_pred HHHH---hCCCCEEEEEeChHHHHHHHHHHhCCcccceEEEEcCC
Q 007536 487 FTVE---VVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSA 528 (599)
Q Consensus 487 ~l~~---l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~ 528 (599)
+++. .+..++-||..|+.|-||+..|++- .+.-+|+.-+.
T Consensus 91 V~dwl~~~g~~~~GLIAaSLSaRIAy~Va~~i--~lsfLitaVGV 133 (294)
T PF02273_consen 91 VIDWLATRGIRRIGLIAASLSARIAYEVAADI--NLSFLITAVGV 133 (294)
T ss_dssp HHHHHHHTT---EEEEEETTHHHHHHHHTTTS----SEEEEES--
T ss_pred HHHHHHhcCCCcchhhhhhhhHHHHHHHhhcc--CcceEEEEeee
Confidence 6554 4678899999999999999998853 46767666543
No 125
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.13 E-value=2.2e-05 Score=77.88 Aligned_cols=121 Identities=21% Similarity=0.209 Sum_probs=86.2
Q ss_pred EEEEECCEEEEEEEcCC-----CCCeEEEECCCCCChHHHHHHH--HHHHh-CCCEEEEEcCC-------CCCCCCCCC-
Q 007536 409 RIWRWNGYQIQYTVAGK-----EGPAILLVHGFGAFLEHYRDNI--YDIAD-GGNRVWAITLL-------GFGRSEKPN- 472 (599)
Q Consensus 409 ~~~~~~g~~l~y~~~g~-----~~p~vlllHG~~~~~~~w~~~~--~~l~~-~g~~vi~~D~~-------G~G~S~~~~- 472 (599)
..+..+|....|..+-+ ..|.||++||.+++..-..... +.|++ .||-|+.+|-- |.|.+..+.
T Consensus 38 ~s~~~~g~~r~y~l~vP~g~~~~apLvv~LHG~~~sgag~~~~sg~d~lAd~~gFlV~yPdg~~~~wn~~~~~~~~~p~~ 117 (312)
T COG3509 38 ASFDVNGLKRSYRLYVPPGLPSGAPLVVVLHGSGGSGAGQLHGTGWDALADREGFLVAYPDGYDRAWNANGCGNWFGPAD 117 (312)
T ss_pred cccccCCCccceEEEcCCCCCCCCCEEEEEecCCCChHHhhcccchhhhhcccCcEEECcCccccccCCCcccccCCccc
Confidence 34566777777665433 1467899999999887766553 55655 48999999632 233332222
Q ss_pred ---CCCCHHHHHHHHHHHHHHhCCC--CEEEEEeChHHHHHHHHHHhCCcccceEEEEcCCC
Q 007536 473 ---IVYTELMWSELLRDFTVEVVGE--PVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAG 529 (599)
Q Consensus 473 ---~~~~~~~~~~~l~~~l~~l~~~--~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~~ 529 (599)
..-+...+.+.+..++.+.+++ +|++.|.|-||.++..++..+|+.+.++..+++..
T Consensus 118 ~~~g~ddVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VAg~~ 179 (312)
T COG3509 118 RRRGVDDVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPVAGLL 179 (312)
T ss_pred ccCCccHHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcccccceeeeeccc
Confidence 1223445666666777777775 89999999999999999999999999999998864
No 126
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=98.12 E-value=2.8e-05 Score=80.47 Aligned_cols=122 Identities=20% Similarity=0.124 Sum_probs=72.8
Q ss_pred eEEEEEECCEEEEEEEcCC-----CCCeEEEECCCCCChHHHHHHHHHHHhCCCEEEEEcCCCCCC-CCCC---------
Q 007536 407 STRIWRWNGYQIQYTVAGK-----EGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGR-SEKP--------- 471 (599)
Q Consensus 407 ~~~~~~~~g~~l~y~~~g~-----~~p~vlllHG~~~~~~~w~~~~~~l~~~g~~vi~~D~~G~G~-S~~~--------- 471 (599)
.+.+-..+|..|+-...-| +-|.||.+||.++....|...+. ++..||.|+.+|.+|+|. |...
T Consensus 58 ~v~f~s~~g~~V~g~l~~P~~~~~~~Pavv~~hGyg~~~~~~~~~~~-~a~~G~~vl~~d~rGqg~~~~d~~~~~~~~~~ 136 (320)
T PF05448_consen 58 DVSFESFDGSRVYGWLYRPKNAKGKLPAVVQFHGYGGRSGDPFDLLP-WAAAGYAVLAMDVRGQGGRSPDYRGSSGGTLK 136 (320)
T ss_dssp EEEEEEGGGEEEEEEEEEES-SSSSEEEEEEE--TT--GGGHHHHHH-HHHTT-EEEEE--TTTSSSS-B-SSBSSS-SS
T ss_pred EEEEEccCCCEEEEEEEecCCCCCCcCEEEEecCCCCCCCCcccccc-cccCCeEEEEecCCCCCCCCCCccccCCCCCc
Confidence 3455556787776433211 24689999999999877766554 566799999999999993 3110
Q ss_pred ----------CCCCCHHHHHHHHHHHHH---Hh---CCCCEEEEEeChHHHHHHHHHHhCCcccceEEEEcCCCC
Q 007536 472 ----------NIVYTELMWSELLRDFTV---EV---VGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGN 530 (599)
Q Consensus 472 ----------~~~~~~~~~~~~l~~~l~---~l---~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~~~ 530 (599)
...+-...+..+....++ .+ ..+++.+.|.|+||.+++.+|+..| +|++++..-|...
T Consensus 137 g~~~~g~~~~~e~~yyr~~~~D~~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd~-rv~~~~~~vP~l~ 210 (320)
T PF05448_consen 137 GHITRGIDDNPEDYYYRRVYLDAVRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALDP-RVKAAAADVPFLC 210 (320)
T ss_dssp SSTTTTTTS-TTT-HHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSS-T-SEEEEESESSS
T ss_pred cHHhcCccCchHHHHHHHHHHHHHHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhCc-cccEEEecCCCcc
Confidence 001111122222222233 22 2368999999999999999999886 6999999987543
No 127
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=98.11 E-value=2.6e-05 Score=82.50 Aligned_cols=102 Identities=16% Similarity=0.193 Sum_probs=84.6
Q ss_pred CeEEEECCCCCChHHH-HHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCEEEEEeChHHH
Q 007536 428 PAILLVHGFGAFLEHY-RDNIYDIADGGNRVWAITLLGFGRSEKPNIVYTELMWSELLRDFTVEVVGEPVHLIGNSIGGY 506 (599)
Q Consensus 428 p~vlllHG~~~~~~~w-~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~lvGhS~Gg~ 506 (599)
|+||++.-+.+..... +.+++.|.. |+.|+..|+.--+..+.....++++++.+.+.++++.++.+ ++++|.|+||.
T Consensus 103 ~pvLiV~Pl~g~~~~L~RS~V~~Ll~-g~dVYl~DW~~p~~vp~~~~~f~ldDYi~~l~~~i~~~G~~-v~l~GvCqgG~ 180 (406)
T TIGR01849 103 PAVLIVAPMSGHYATLLRSTVEALLP-DHDVYITDWVNARMVPLSAGKFDLEDYIDYLIEFIRFLGPD-IHVIAVCQPAV 180 (406)
T ss_pred CcEEEEcCCchHHHHHHHHHHHHHhC-CCcEEEEeCCCCCCCchhcCCCCHHHHHHHHHHHHHHhCCC-CcEEEEchhhH
Confidence 7999999998765543 578999998 99999999987776544456789999999999999888766 99999999999
Q ss_pred HHHHHHHhC-----CcccceEEEEcCCCCC
Q 007536 507 FVAIVACLW-----PAVVKSVVLINSAGNV 531 (599)
Q Consensus 507 ia~~~a~~~-----p~~v~~lvli~~~~~~ 531 (599)
.++.+++.+ |++++++++++++...
T Consensus 181 ~~laa~Al~a~~~~p~~~~sltlm~~PID~ 210 (406)
T TIGR01849 181 PVLAAVALMAENEPPAQPRSMTLMGGPIDA 210 (406)
T ss_pred HHHHHHHHHHhcCCCCCcceEEEEecCccC
Confidence 977766654 6779999999987553
No 128
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=98.11 E-value=3.1e-05 Score=74.33 Aligned_cols=95 Identities=22% Similarity=0.226 Sum_probs=71.9
Q ss_pred EECCCC--CChHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHH-hCCCCEEEEEeChHHHHH
Q 007536 432 LVHGFG--AFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNIVYTELMWSELLRDFTVE-VVGEPVHLIGNSIGGYFV 508 (599)
Q Consensus 432 llHG~~--~~~~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~-l~~~~~~lvGhS~Gg~ia 508 (599)
++|+.+ ++...|..+...|.. ++.|+++|++|+|.+.... .+.+.+++.+.+.+.. ....+++++||||||.++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~l~~-~~~v~~~~~~g~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~l~g~s~Gg~~a 78 (212)
T smart00824 2 CFPSTAAPSGPHEYARLAAALRG-RRDVSALPLPGFGPGEPLP--ASADALVEAQAEAVLRAAGGRPFVLVGHSSGGLLA 78 (212)
T ss_pred ccCCCCCCCcHHHHHHHHHhcCC-CccEEEecCCCCCCCCCCC--CCHHHHHHHHHHHHHHhcCCCCeEEEEECHHHHHH
Confidence 455544 677889999999976 4999999999998765432 3566666655444433 345789999999999999
Q ss_pred HHHHHh---CCcccceEEEEcCCC
Q 007536 509 AIVACL---WPAVVKSVVLINSAG 529 (599)
Q Consensus 509 ~~~a~~---~p~~v~~lvli~~~~ 529 (599)
..++.. .++.+.+++++++..
T Consensus 79 ~~~a~~l~~~~~~~~~l~~~~~~~ 102 (212)
T smart00824 79 HAVAARLEARGIPPAAVVLLDTYP 102 (212)
T ss_pred HHHHHHHHhCCCCCcEEEEEccCC
Confidence 988875 456799999998754
No 129
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=98.07 E-value=9.5e-06 Score=84.78 Aligned_cols=103 Identities=23% Similarity=0.243 Sum_probs=81.7
Q ss_pred CCeEEEECCCCCChHHHHHHHHHHHhCCCE---EEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCEEEEEeCh
Q 007536 427 GPAILLVHGFGAFLEHYRDNIYDIADGGNR---VWAITLLGFGRSEKPNIVYTELMWSELLRDFTVEVVGEPVHLIGNSI 503 (599)
Q Consensus 427 ~p~vlllHG~~~~~~~w~~~~~~l~~~g~~---vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~lvGhS~ 503 (599)
.-++|++||++.+...|..+...+...|+. ++++++++- .... ......+.+...+.+++...+.+++.|+||||
T Consensus 59 ~~pivlVhG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~-~~~~~~~ql~~~V~~~l~~~ga~~v~LigHS~ 136 (336)
T COG1075 59 KEPIVLVHGLGGGYGNFLPLDYRLAILGWLTNGVYAFELSGG-DGTY-SLAVRGEQLFAYVDEVLAKTGAKKVNLIGHSM 136 (336)
T ss_pred CceEEEEccCcCCcchhhhhhhhhcchHHHhccccccccccc-CCCc-cccccHHHHHHHHHHHHhhcCCCceEEEeecc
Confidence 458999999988888888887777777777 888888866 2211 12335566667777777777789999999999
Q ss_pred HHHHHHHHHHhCC--cccceEEEEcCCCCC
Q 007536 504 GGYFVAIVACLWP--AVVKSVVLINSAGNV 531 (599)
Q Consensus 504 Gg~ia~~~a~~~p--~~v~~lvli~~~~~~ 531 (599)
||.++..++...+ .+|+.++.++++...
T Consensus 137 GG~~~ry~~~~~~~~~~V~~~~tl~tp~~G 166 (336)
T COG1075 137 GGLDSRYYLGVLGGANRVASVVTLGTPHHG 166 (336)
T ss_pred cchhhHHHHhhcCccceEEEEEEeccCCCC
Confidence 9999999999888 899999999997543
No 130
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=98.06 E-value=1e-05 Score=80.64 Aligned_cols=106 Identities=19% Similarity=0.271 Sum_probs=70.2
Q ss_pred CCeEEEECCCCCChHHHHHHHHHHH-hCC--CEE--EEEcCCCC----CCCC---C-C-------CCC-CCHHHHHHHHH
Q 007536 427 GPAILLVHGFGAFLEHYRDNIYDIA-DGG--NRV--WAITLLGF----GRSE---K-P-------NIV-YTELMWSELLR 485 (599)
Q Consensus 427 ~p~vlllHG~~~~~~~w~~~~~~l~-~~g--~~v--i~~D~~G~----G~S~---~-~-------~~~-~~~~~~~~~l~ 485 (599)
..|.|||||++++...+..++..+. +.| -.+ +-++--|. |.=. . | ... .+....+.++.
T Consensus 11 ~tPTifihG~~gt~~s~~~mi~~~~~~~~~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~~~qa~wl~ 90 (255)
T PF06028_consen 11 TTPTIFIHGYGGTANSFNHMINRLENKQGVAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFEDNRNANYKKQAKWLK 90 (255)
T ss_dssp -EEEEEE--TTGGCCCCHHHHHHHHHCSTS-S-EEEEEEETTSEEEEES---TT-SS-EEEEEESSTT-CHHHHHHHHHH
T ss_pred CCcEEEECCCCCChhHHHHHHHHHHhhcCCCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEecCCCcCCHHHHHHHHH
Confidence 5689999999999999999999997 554 233 33333333 2111 1 1 111 35667788888
Q ss_pred HHHHHh----CCCCEEEEEeChHHHHHHHHHHhCCc-----ccceEEEEcCCCCCC
Q 007536 486 DFTVEV----VGEPVHLIGNSIGGYFVAIVACLWPA-----VVKSVVLINSAGNVI 532 (599)
Q Consensus 486 ~~l~~l----~~~~~~lvGhS~Gg~ia~~~a~~~p~-----~v~~lvli~~~~~~~ 532 (599)
.+|..| +.+++.+|||||||.+++.++..+.. .+.++|.|+++....
T Consensus 91 ~vl~~L~~~Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfng~ 146 (255)
T PF06028_consen 91 KVLKYLKKKYHFKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFNGI 146 (255)
T ss_dssp HHHHHHHHCC--SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TTTT
T ss_pred HHHHHHHHhcCCCEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccCcc
Confidence 887766 46899999999999999999887532 589999999975433
No 131
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=98.05 E-value=1.2e-05 Score=84.83 Aligned_cols=124 Identities=23% Similarity=0.280 Sum_probs=91.6
Q ss_pred EEEEEECCEEEEEEEc--C-CCCCeEEEECCCCCChHHHHH------HHHHHHhCCCEEEEEcCCCCCCCCC-----CC-
Q 007536 408 TRIWRWNGYQIQYTVA--G-KEGPAILLVHGFGAFLEHYRD------NIYDIADGGNRVWAITLLGFGRSEK-----PN- 472 (599)
Q Consensus 408 ~~~~~~~g~~l~y~~~--g-~~~p~vlllHG~~~~~~~w~~------~~~~l~~~g~~vi~~D~~G~G~S~~-----~~- 472 (599)
+...+.||+-+..... + ..+|+|+|.||+.+++..|-. ++=.|+++||.|..-+.||-.+|.. +.
T Consensus 51 h~V~T~DgYiL~lhRIp~~~~~rp~Vll~HGLl~sS~~Wv~n~p~~sLaf~LadaGYDVWLgN~RGn~ySr~h~~l~~~~ 130 (403)
T KOG2624|consen 51 HEVTTEDGYILTLHRIPRGKKKRPVVLLQHGLLASSSSWVLNGPEQSLAFLLADAGYDVWLGNNRGNTYSRKHKKLSPSS 130 (403)
T ss_pred EEEEccCCeEEEEeeecCCCCCCCcEEEeeccccccccceecCccccHHHHHHHcCCceeeecCcCcccchhhcccCCcC
Confidence 4456678876655432 2 347999999999999999964 3446788999999999999888853 11
Q ss_pred C----CCCHHH-----HHHHHHHHHHHhCCCCEEEEEeChHHHHHHHHHHhCCc---ccceEEEEcCCCCC
Q 007536 473 I----VYTELM-----WSELLRDFTVEVVGEPVHLIGNSIGGYFVAIVACLWPA---VVKSVVLINSAGNV 531 (599)
Q Consensus 473 ~----~~~~~~-----~~~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~---~v~~lvli~~~~~~ 531 (599)
. .++..+ +.+.+..+++.-+.++++.||||.|+.+.+.+++..|+ +|+.+++++|++..
T Consensus 131 ~~~FW~FS~~Em~~yDLPA~IdyIL~~T~~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~aLAP~~~~ 201 (403)
T KOG2624|consen 131 DKEFWDFSWHEMGTYDLPAMIDYILEKTGQEKLHYVGHSQGTTTFFVMLSERPEYNKKIKSFIALAPAAFP 201 (403)
T ss_pred CcceeecchhhhhhcCHHHHHHHHHHhccccceEEEEEEccchhheehhcccchhhhhhheeeeecchhhh
Confidence 1 223332 33344455555567899999999999999999998875 79999999998743
No 132
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=98.05 E-value=1.6e-05 Score=84.35 Aligned_cols=105 Identities=16% Similarity=0.082 Sum_probs=60.2
Q ss_pred CCeEEEECCCCCChHHHHHHHHHHHhCCCEEEEEcCCCCCCC------CC-----C-------C------CCC----CHH
Q 007536 427 GPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRS------EK-----P-------N------IVY----TEL 478 (599)
Q Consensus 427 ~p~vlllHG~~~~~~~w~~~~~~l~~~g~~vi~~D~~G~G~S------~~-----~-------~------~~~----~~~ 478 (599)
-|.|||-||++++...+..++..|+.+||-|+++|++..-.+ +. . . ... ..+
T Consensus 100 ~PvvIFSHGlgg~R~~yS~~~~eLAS~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (379)
T PF03403_consen 100 FPVVIFSHGLGGSRTSYSAICGELASHGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDFDPEEEFE 179 (379)
T ss_dssp EEEEEEE--TT--TTTTHHHHHHHHHTT-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE-----GGGHHH
T ss_pred CCEEEEeCCCCcchhhHHHHHHHHHhCCeEEEEeccCCCceeEEEeccCCCccccccccccccccceeccccccchhHHH
Confidence 588999999999999999999999999999999999954211 00 0 0 000 000
Q ss_pred -------HHHHHHHHHHHHh--------------------------CCCCEEEEEeChHHHHHHHHHHhCCcccceEEEE
Q 007536 479 -------MWSELLRDFTVEV--------------------------VGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLI 525 (599)
Q Consensus 479 -------~~~~~l~~~l~~l--------------------------~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli 525 (599)
.-+.++..+++.+ ..+++.++|||+||+.++..+... .+++..|++
T Consensus 180 ~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d-~r~~~~I~L 258 (379)
T PF03403_consen 180 LRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQD-TRFKAGILL 258 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH--TT--EEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhc-cCcceEEEe
Confidence 0111222222211 125799999999999999888776 679999999
Q ss_pred cCCCCCC
Q 007536 526 NSAGNVI 532 (599)
Q Consensus 526 ~~~~~~~ 532 (599)
|+...+.
T Consensus 259 D~W~~Pl 265 (379)
T PF03403_consen 259 DPWMFPL 265 (379)
T ss_dssp S---TTS
T ss_pred CCcccCC
Confidence 9976544
No 133
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=98.04 E-value=1.1e-05 Score=79.00 Aligned_cols=86 Identities=16% Similarity=0.166 Sum_probs=49.3
Q ss_pred CCeEEEECCCCCChHHHHHHHHHHHhC--CCEEEEEcCCCCCCCCCCCCCCCHHHHH----HHHHHHHHHhCC--CCEEE
Q 007536 427 GPAILLVHGFGAFLEHYRDNIYDIADG--GNRVWAITLLGFGRSEKPNIVYTELMWS----ELLRDFTVEVVG--EPVHL 498 (599)
Q Consensus 427 ~p~vlllHG~~~~~~~w~~~~~~l~~~--g~~vi~~D~~G~G~S~~~~~~~~~~~~~----~~l~~~l~~l~~--~~~~l 498 (599)
...|||+||+.++...|..+...+... ++.-..+...++..... ....+++..+ +.|.+.+..... .++++
T Consensus 4 ~hLvV~vHGL~G~~~d~~~~~~~l~~~~~~~~~~~i~~~~~~~n~~-~T~~gI~~~g~rL~~eI~~~~~~~~~~~~~Isf 82 (217)
T PF05057_consen 4 VHLVVFVHGLWGNPADMRYLKNHLEKIPEDLPNARIVVLGYSNNEF-KTFDGIDVCGERLAEEILEHIKDYESKIRKISF 82 (217)
T ss_pred CEEEEEeCCCCCCHHHHHHHHHHHHHhhhhcchhhhhhhccccccc-ccchhhHHHHHHHHHHHHHhccccccccccceE
Confidence 346999999999999998776666551 12111222222211111 1112334333 344444433333 48999
Q ss_pred EEeChHHHHHHHHHH
Q 007536 499 IGNSIGGYFVAIVAC 513 (599)
Q Consensus 499 vGhS~Gg~ia~~~a~ 513 (599)
|||||||.++-.+..
T Consensus 83 IgHSLGGli~r~al~ 97 (217)
T PF05057_consen 83 IGHSLGGLIARYALG 97 (217)
T ss_pred EEecccHHHHHHHHH
Confidence 999999999966544
No 134
>PRK10115 protease 2; Provisional
Probab=97.96 E-value=6.5e-05 Score=85.96 Aligned_cols=120 Identities=13% Similarity=0.055 Sum_probs=88.1
Q ss_pred EEECCEEEEEE-Ec------CCCCCeEEEECCCCCChH--HHHHHHHHHHhCCCEEEEEcCCCCCCCCC--------CCC
Q 007536 411 WRWNGYQIQYT-VA------GKEGPAILLVHGFGAFLE--HYRDNIYDIADGGNRVWAITLLGFGRSEK--------PNI 473 (599)
Q Consensus 411 ~~~~g~~l~y~-~~------g~~~p~vlllHG~~~~~~--~w~~~~~~l~~~g~~vi~~D~~G~G~S~~--------~~~ 473 (599)
...||.+|.+. .. ..+.|.||++||..+... .|......|+++||.|+.++.||-|.=.. ...
T Consensus 422 ~s~DG~~Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~~~~p~f~~~~~~l~~rG~~v~~~n~RGs~g~G~~w~~~g~~~~k 501 (686)
T PRK10115 422 TARDGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDADFSFSRLSLLDRGFVYAIVHVRGGGELGQQWYEDGKFLKK 501 (686)
T ss_pred ECCCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCccHHHHHHHHCCcEEEEEEcCCCCccCHHHHHhhhhhcC
Confidence 34688887752 21 112588999999876653 46666778888999999999998654321 112
Q ss_pred CCCHHHHHHHHHHHHHHhC--CCCEEEEEeChHHHHHHHHHHhCCcccceEEEEcCCCC
Q 007536 474 VYTELMWSELLRDFTVEVV--GEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGN 530 (599)
Q Consensus 474 ~~~~~~~~~~l~~~l~~l~--~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~~~ 530 (599)
..+.+++.+.+..+++.-- .+++.+.|.|.||.++..++.++|++++++|+..+...
T Consensus 502 ~~~~~D~~a~~~~Lv~~g~~d~~rl~i~G~S~GG~l~~~~~~~~Pdlf~A~v~~vp~~D 560 (686)
T PRK10115 502 KNTFNDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGVAINQRPELFHGVIAQVPFVD 560 (686)
T ss_pred CCcHHHHHHHHHHHHHcCCCChHHeEEEEECHHHHHHHHHHhcChhheeEEEecCCchh
Confidence 3466677766666664421 26899999999999999999999999999999888644
No 135
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=97.92 E-value=7e-05 Score=68.79 Aligned_cols=92 Identities=18% Similarity=0.165 Sum_probs=65.9
Q ss_pred CeEEEECCCCCCh-HHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCEEEEEeChHHH
Q 007536 428 PAILLVHGFGAFL-EHYRDNIYDIADGGNRVWAITLLGFGRSEKPNIVYTELMWSELLRDFTVEVVGEPVHLIGNSIGGY 506 (599)
Q Consensus 428 p~vlllHG~~~~~-~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~lvGhS~Gg~ 506 (599)
+.+|++||+.+|. .+|+...+.-.. .+-.+++. + ......++|.+.+.+.+... .++++||+||+|+.
T Consensus 3 ~~~lIVpG~~~Sg~~HWq~~we~~l~---~a~rveq~-----~--w~~P~~~dWi~~l~~~v~a~-~~~~vlVAHSLGc~ 71 (181)
T COG3545 3 TDVLIVPGYGGSGPNHWQSRWESALP---NARRVEQD-----D--WEAPVLDDWIARLEKEVNAA-EGPVVLVAHSLGCA 71 (181)
T ss_pred ceEEEecCCCCCChhHHHHHHHhhCc---cchhcccC-----C--CCCCCHHHHHHHHHHHHhcc-CCCeEEEEecccHH
Confidence 5689999998775 578765443221 12223222 1 12346778888777777665 46699999999999
Q ss_pred HHHHHHHhCCcccceEEEEcCCCC
Q 007536 507 FVAIVACLWPAVVKSVVLINSAGN 530 (599)
Q Consensus 507 ia~~~a~~~p~~v~~lvli~~~~~ 530 (599)
.++.++......|+|+++++++-.
T Consensus 72 ~v~h~~~~~~~~V~GalLVAppd~ 95 (181)
T COG3545 72 TVAHWAEHIQRQVAGALLVAPPDV 95 (181)
T ss_pred HHHHHHHhhhhccceEEEecCCCc
Confidence 999999987778999999999743
No 136
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.86 E-value=2.4e-05 Score=76.27 Aligned_cols=123 Identities=24% Similarity=0.234 Sum_probs=82.7
Q ss_pred eeEEEEEECCEEEEEEEc----C-CCCCeEEEECCCCCChHHHHHHHHHHHhCCCEEEEEcCCCCCCCCC----CC-C--
Q 007536 406 YSTRIWRWNGYQIQYTVA----G-KEGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEK----PN-I-- 473 (599)
Q Consensus 406 ~~~~~~~~~g~~l~y~~~----g-~~~p~vlllHG~~~~~~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~----~~-~-- 473 (599)
+.+.+-..+|.+|.-+.. + ..-|.||-.||+++....|.++...-+ .||.|+.+|.||.|.|.. +. +
T Consensus 57 ydvTf~g~~g~rI~gwlvlP~~~~~~~P~vV~fhGY~g~~g~~~~~l~wa~-~Gyavf~MdvRGQg~~~~dt~~~p~~~s 135 (321)
T COG3458 57 YDVTFTGYGGARIKGWLVLPRHEKGKLPAVVQFHGYGGRGGEWHDMLHWAV-AGYAVFVMDVRGQGSSSQDTADPPGGPS 135 (321)
T ss_pred EEEEEeccCCceEEEEEEeecccCCccceEEEEeeccCCCCCccccccccc-cceeEEEEecccCCCccccCCCCCCCCc
Confidence 344455567777765432 2 135889999999999888877665544 489999999999998832 11 0
Q ss_pred --------------CCCHHHHHHHHHHHHH------HhCCCCEEEEEeChHHHHHHHHHHhCCcccceEEEEcCCCC
Q 007536 474 --------------VYTELMWSELLRDFTV------EVVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGN 530 (599)
Q Consensus 474 --------------~~~~~~~~~~l~~~l~------~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~~~ 530 (599)
.|-....-.|+...++ .+.-+++.+.|.|.||.+++.+++..| +|++++.+=|...
T Consensus 136 ~pG~mtrGilD~kd~yyyr~v~~D~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal~~-rik~~~~~~Pfl~ 211 (321)
T COG3458 136 DPGFMTRGILDRKDTYYYRGVFLDAVRAVEILASLDEVDEERIGVTGGSQGGGLALAAAALDP-RIKAVVADYPFLS 211 (321)
T ss_pred CCceeEeecccCCCceEEeeehHHHHHHHHHHhccCccchhheEEeccccCchhhhhhhhcCh-hhhcccccccccc
Confidence 0111111222222222 223478999999999999999988876 7999888877543
No 137
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=97.84 E-value=0.00015 Score=79.09 Aligned_cols=121 Identities=17% Similarity=0.138 Sum_probs=82.8
Q ss_pred EEEEEEC----CEEEEEEEcCC-----CCCeEEEECCCCCChHHHHHHHH-----------H-------HHhCCCEEEEE
Q 007536 408 TRIWRWN----GYQIQYTVAGK-----EGPAILLVHGFGAFLEHYRDNIY-----------D-------IADGGNRVWAI 460 (599)
Q Consensus 408 ~~~~~~~----g~~l~y~~~g~-----~~p~vlllHG~~~~~~~w~~~~~-----------~-------l~~~g~~vi~~ 460 (599)
.-+++++ +..++|.-... +.|.||+++|.+|.+..+-.+.+ . ..+ ..+++.+
T Consensus 49 sGy~~v~~~~~~~~lFyw~~~s~~~~~~~Pl~lwlnGGPG~ss~~G~f~E~GP~~i~~~~~~~~~n~~sW~~-~~~~l~i 127 (462)
T PTZ00472 49 SGYFDIPGNQTDKHYFYWAFGPRNGNPEAPVLLWMTGGPGCSSMFALLAENGPCLMNETTGDIYNNTYSWNN-EAYVIYV 127 (462)
T ss_pred eEEEEeCCCCCCceEEEEEEEcCCCCCCCCEEEEECCCCcHHHHHhhhccCCCeEEeCCCCceeECCccccc-ccCeEEE
Confidence 3567774 36677765432 26899999999988876533211 1 222 2689999
Q ss_pred cCC-CCCCCCCCCC--CCCHHHHHHHHHHHHHHh-------CCCCEEEEEeChHHHHHHHHHHhC----------Ccccc
Q 007536 461 TLL-GFGRSEKPNI--VYTELMWSELLRDFTVEV-------VGEPVHLIGNSIGGYFVAIVACLW----------PAVVK 520 (599)
Q Consensus 461 D~~-G~G~S~~~~~--~~~~~~~~~~l~~~l~~l-------~~~~~~lvGhS~Gg~ia~~~a~~~----------p~~v~ 520 (599)
|.| |+|.|..... ..+.+..++++.+++... ...+++|+|||+||.++..+|..- +-.++
T Consensus 128 DqP~G~G~S~~~~~~~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inLk 207 (462)
T PTZ00472 128 DQPAGVGFSYADKADYDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYINLA 207 (462)
T ss_pred eCCCCcCcccCCCCCCCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccCCceeeeE
Confidence 986 8888864322 345567788888877643 347999999999999998887651 12478
Q ss_pred eEEEEcCCC
Q 007536 521 SVVLINSAG 529 (599)
Q Consensus 521 ~lvli~~~~ 529 (599)
|+++-++..
T Consensus 208 Gi~IGNg~~ 216 (462)
T PTZ00472 208 GLAVGNGLT 216 (462)
T ss_pred EEEEecccc
Confidence 998888753
No 138
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=97.82 E-value=0.00042 Score=70.38 Aligned_cols=103 Identities=22% Similarity=0.212 Sum_probs=69.7
Q ss_pred EEEECCEEEEEEEcC----CCCCeEEEECCCCCChHHH------HHHHHHHH-hCCCEEEEEcCCCCCCCCCCCCCCCHH
Q 007536 410 IWRWNGYQIQYTVAG----KEGPAILLVHGFGAFLEHY------RDNIYDIA-DGGNRVWAITLLGFGRSEKPNIVYTEL 478 (599)
Q Consensus 410 ~~~~~g~~l~y~~~g----~~~p~vlllHG~~~~~~~w------~~~~~~l~-~~g~~vi~~D~~G~G~S~~~~~~~~~~ 478 (599)
.+..|++.|...... .+...||+.-|.++.-+.. ...+..++ ..|-+|+.+++||.|.|.+.. +.+
T Consensus 116 ~Iq~D~~~IDt~~I~~~~a~~~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~~~aNvl~fNYpGVg~S~G~~---s~~ 192 (365)
T PF05677_consen 116 PIQYDGVKIDTMAIHQPEAKPQRWILVSNGNGECYENRAMLDYKDDWIQRFAKELGANVLVFNYPGVGSSTGPP---SRK 192 (365)
T ss_pred EEeeCCEEEEEEEeeCCCCCCCcEEEEEcCChHHhhhhhhhccccHHHHHHHHHcCCcEEEECCCccccCCCCC---CHH
Confidence 455577666543322 1356799999988766551 12222332 347899999999999998765 456
Q ss_pred HHHHHHHHHHHHhC-----C--CCEEEEEeChHHHHHHHHHHhC
Q 007536 479 MWSELLRDFTVEVV-----G--EPVHLIGNSIGGYFVAIVACLW 515 (599)
Q Consensus 479 ~~~~~l~~~l~~l~-----~--~~~~lvGhS~Gg~ia~~~a~~~ 515 (599)
+++.+-.+.++.+. . +.+++-|||+||.++..++..+
T Consensus 193 dLv~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~ 236 (365)
T PF05677_consen 193 DLVKDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKKE 236 (365)
T ss_pred HHHHHHHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHHhc
Confidence 67666666655542 2 6799999999999998866654
No 139
>PRK04940 hypothetical protein; Provisional
Probab=97.76 E-value=0.00015 Score=67.88 Aligned_cols=86 Identities=19% Similarity=0.196 Sum_probs=53.1
Q ss_pred EEEECCCCCChHH--HHHH-HHHHHhCCCEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC----CCCEEEEEeC
Q 007536 430 ILLVHGFGAFLEH--YRDN-IYDIADGGNRVWAITLLGFGRSEKPNIVYTELMWSELLRDFTVEVV----GEPVHLIGNS 502 (599)
Q Consensus 430 vlllHG~~~~~~~--w~~~-~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~----~~~~~lvGhS 502 (599)
||++|||..|... .+.. ...+ .-+.+++ +++ ........+.+.+.+..+. .+++.|||.|
T Consensus 2 IlYlHGF~SS~~S~~~Ka~~l~~~-~p~~~~~--~l~----------~~~P~~a~~~l~~~i~~~~~~~~~~~~~liGSS 68 (180)
T PRK04940 2 IIYLHGFDSTSPGNHEKVLQLQFI-DPDVRLI--SYS----------TLHPKHDMQHLLKEVDKMLQLSDDERPLICGVG 68 (180)
T ss_pred EEEeCCCCCCCCccHHHHHhheee-CCCCeEE--ECC----------CCCHHHHHHHHHHHHHHhhhccCCCCcEEEEeC
Confidence 7899999888765 4321 1122 1123333 221 1223333344555554321 1579999999
Q ss_pred hHHHHHHHHHHhCCcccceEEEEcCCCCC
Q 007536 503 IGGYFVAIVACLWPAVVKSVVLINSAGNV 531 (599)
Q Consensus 503 ~Gg~ia~~~a~~~p~~v~~lvli~~~~~~ 531 (599)
+||+.|..+|.++. + ..|+|+|+..+
T Consensus 69 LGGyyA~~La~~~g--~-~aVLiNPAv~P 94 (180)
T PRK04940 69 LGGYWAERIGFLCG--I-RQVIFNPNLFP 94 (180)
T ss_pred hHHHHHHHHHHHHC--C-CEEEECCCCCh
Confidence 99999999999985 3 67899998654
No 140
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=97.74 E-value=0.00023 Score=73.73 Aligned_cols=102 Identities=19% Similarity=0.086 Sum_probs=68.2
Q ss_pred CCeEEEECCCC---CChHHH-HHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHH---HHhCC--CCEE
Q 007536 427 GPAILLVHGFG---AFLEHY-RDNIYDIADGGNRVWAITLLGFGRSEKPNIVYTELMWSELLRDFT---VEVVG--EPVH 497 (599)
Q Consensus 427 ~p~vlllHG~~---~~~~~w-~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l---~~l~~--~~~~ 497 (599)
.|+||++||.+ ++.... ..+...+...|+.|+.+|+|-.-+-.. +..+++..+.+.-+. .+++. ++++
T Consensus 79 ~p~vly~HGGg~~~g~~~~~~~~~~~~~~~~g~~vv~vdYrlaPe~~~---p~~~~d~~~a~~~l~~~~~~~g~dp~~i~ 155 (312)
T COG0657 79 APVVLYLHGGGWVLGSLRTHDALVARLAAAAGAVVVSVDYRLAPEHPF---PAALEDAYAAYRWLRANAAELGIDPSRIA 155 (312)
T ss_pred CcEEEEEeCCeeeecChhhhHHHHHHHHHHcCCEEEecCCCCCCCCCC---CchHHHHHHHHHHHHhhhHhhCCCccceE
Confidence 68999999985 333444 445555666799999999994433322 234444333333333 33443 7899
Q ss_pred EEEeChHHHHHHHHHHhCCc----ccceEEEEcCCCCC
Q 007536 498 LIGNSIGGYFVAIVACLWPA----VVKSVVLINSAGNV 531 (599)
Q Consensus 498 lvGhS~Gg~ia~~~a~~~p~----~v~~lvli~~~~~~ 531 (599)
++|+|.||.+++.++..-.+ ...+.+++.+....
T Consensus 156 v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~d~ 193 (312)
T COG0657 156 VAGDSAGGHLALALALAARDRGLPLPAAQVLISPLLDL 193 (312)
T ss_pred EEecCcccHHHHHHHHHHHhcCCCCceEEEEEecccCC
Confidence 99999999999998876443 47888899886443
No 141
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=97.73 E-value=9.9e-05 Score=69.29 Aligned_cols=97 Identities=23% Similarity=0.225 Sum_probs=73.7
Q ss_pred eEEEECCCCCChHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHH----HHhCCCCEEEEEeChH
Q 007536 429 AILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNIVYTELMWSELLRDFT----VEVVGEPVHLIGNSIG 504 (599)
Q Consensus 429 ~vlllHG~~~~~~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l----~~l~~~~~~lvGhS~G 504 (599)
.+||+.|=|+-...=+.+++.|+++|+.|+.+|-+-+=.+.+ +.+..+.++..++ .+.+.++++|||.|+|
T Consensus 4 ~~v~~SGDgGw~~~d~~~a~~l~~~G~~VvGvdsl~Yfw~~r-----tP~~~a~Dl~~~i~~y~~~w~~~~vvLiGYSFG 78 (192)
T PF06057_consen 4 LAVFFSGDGGWRDLDKQIAEALAKQGVPVVGVDSLRYFWSER-----TPEQTAADLARIIRHYRARWGRKRVVLIGYSFG 78 (192)
T ss_pred EEEEEeCCCCchhhhHHHHHHHHHCCCeEEEechHHHHhhhC-----CHHHHHHHHHHHHHHHHHHhCCceEEEEeecCC
Confidence 467888876655555678999999999999999876555533 4455566655555 4557789999999999
Q ss_pred HHHHHHHHHhCC----cccceEEEEcCCCC
Q 007536 505 GYFVAIVACLWP----AVVKSVVLINSAGN 530 (599)
Q Consensus 505 g~ia~~~a~~~p----~~v~~lvli~~~~~ 530 (599)
+-+.-....+-| ++|..++|+++...
T Consensus 79 ADvlP~~~nrLp~~~r~~v~~v~Ll~p~~~ 108 (192)
T PF06057_consen 79 ADVLPFIYNRLPAALRARVAQVVLLSPSTT 108 (192)
T ss_pred chhHHHHHhhCCHHHHhheeEEEEeccCCc
Confidence 988887777766 47999999998743
No 142
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=97.71 E-value=3.9e-05 Score=76.12 Aligned_cols=101 Identities=16% Similarity=0.143 Sum_probs=70.1
Q ss_pred CCeEEEECCCCCChHHHHHHHHHHHhCCCEEEEEcCCCCCCCCC------C-CCCC-------------------CHHHH
Q 007536 427 GPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEK------P-NIVY-------------------TELMW 480 (599)
Q Consensus 427 ~p~vlllHG~~~~~~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~------~-~~~~-------------------~~~~~ 480 (599)
=|.|||-||++++...|..+.-.|+.+||-|.++.+|.+..+.. + ...+ .-+++
T Consensus 118 ~PvvvFSHGLggsRt~YSa~c~~LAShG~VVaavEHRD~SA~~Ty~~~~~~~n~~lveq~~~ir~v~~~ekef~irNeqv 197 (399)
T KOG3847|consen 118 YPVVVFSHGLGGSRTLYSAYCTSLASHGFVVAAVEHRDRSACWTYVLKEKHENEPLVEQWIKIRLVEANEKEFHIRNEQV 197 (399)
T ss_pred ccEEEEecccccchhhHHHHhhhHhhCceEEEEeecccCcceeEEEecccccCCcccccceEeeeeccCceeEEeeCHHH
Confidence 48899999999999999999999999999999999987655421 0 0000 00111
Q ss_pred ----HHH--HHHHHHHhC------------------------CCCEEEEEeChHHHHHHHHHHhCCcccceEEEEcCC
Q 007536 481 ----SEL--LRDFTVEVV------------------------GEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSA 528 (599)
Q Consensus 481 ----~~~--l~~~l~~l~------------------------~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~ 528 (599)
.+. ...++.+++ -.++.++|||+||+.++...+.+- .++..|++++-
T Consensus 198 ~~R~~Ec~~aL~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~s~~aViGHSFGgAT~i~~ss~~t-~FrcaI~lD~W 274 (399)
T KOG3847|consen 198 GQRAQECQKALKILEQINDGGTPDNVLPGNNSDLEQLKGNLDTSQAAVIGHSFGGATSIASSSSHT-DFRCAIALDAW 274 (399)
T ss_pred HHHHHHHHHHHHHHHHhhcCCCchhcccCccccHHHHhcchhhhhhhheeccccchhhhhhhcccc-ceeeeeeeeee
Confidence 111 111222221 146899999999999988777654 58888888874
No 143
>COG4099 Predicted peptidase [General function prediction only]
Probab=97.69 E-value=0.00017 Score=71.30 Aligned_cols=111 Identities=20% Similarity=0.216 Sum_probs=67.9
Q ss_pred CEEEEEEEcCCC-------C-CeEEEECCCCCChHHHHHHHHHHHhCCCEEEEEcCCCCC-------------CCCCCCC
Q 007536 415 GYQIQYTVAGKE-------G-PAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFG-------------RSEKPNI 473 (599)
Q Consensus 415 g~~l~y~~~g~~-------~-p~vlllHG~~~~~~~w~~~~~~l~~~g~~vi~~D~~G~G-------------~S~~~~~ 473 (599)
|.+|-|+-+-++ - |.|||+||.|..+..=.. .+.. |.-.|+++.|-.+ .++...
T Consensus 171 gneLkYrly~Pkdy~pdkky~PLvlfLHgagq~g~dn~~---~l~s-g~gaiawa~pedqcfVlAPQy~~if~d~e~~t- 245 (387)
T COG4099 171 GNELKYRLYTPKDYAPDKKYYPLVLFLHGAGQGGSDNDK---VLSS-GIGAIAWAGPEDQCFVLAPQYNPIFADSEEKT- 245 (387)
T ss_pred CceeeEEEecccccCCCCccccEEEEEecCCCCCchhhh---hhhc-CccceeeecccCceEEEccccccccccccccc-
Confidence 556777654431 2 789999999876653222 1221 2333344433333 222211
Q ss_pred CCCHHHHHHHHHHHH-HHhCC--CCEEEEEeChHHHHHHHHHHhCCcccceEEEEcCCCC
Q 007536 474 VYTELMWSELLRDFT-VEVVG--EPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGN 530 (599)
Q Consensus 474 ~~~~~~~~~~l~~~l-~~l~~--~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~~~ 530 (599)
........+.+.+.+ ++.++ .++.++|.|+||+.++.++.++|+.+.+.++|++.+.
T Consensus 246 ~~~l~~~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfPdfFAaa~~iaG~~d 305 (387)
T COG4099 246 LLYLIEKIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPDFFAAAVPIAGGGD 305 (387)
T ss_pred chhHHHHHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCchhhheeeeecCCCc
Confidence 111222333444333 33344 6899999999999999999999999999999998765
No 144
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=97.68 E-value=9.1e-05 Score=69.35 Aligned_cols=99 Identities=12% Similarity=0.103 Sum_probs=64.6
Q ss_pred CCeEEEECCC---CCChHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCC-CCCHHHHHHHHHHHHHHhCC-CCEEEEEe
Q 007536 427 GPAILLVHGF---GAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNI-VYTELMWSELLRDFTVEVVG-EPVHLIGN 501 (599)
Q Consensus 427 ~p~vlllHG~---~~~~~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~-~~~~~~~~~~l~~~l~~l~~-~~~~lvGh 501 (599)
.+..|||||. .++..+=-.++..+.+.||+|..+ |+|.+..... .-++.+...-+.-+++.... +.+.+-||
T Consensus 67 ~klfIfIHGGYW~~g~rk~clsiv~~a~~~gY~vasv---gY~l~~q~htL~qt~~~~~~gv~filk~~~n~k~l~~gGH 143 (270)
T KOG4627|consen 67 AKLFIFIHGGYWQEGDRKMCLSIVGPAVRRGYRVASV---GYNLCPQVHTLEQTMTQFTHGVNFILKYTENTKVLTFGGH 143 (270)
T ss_pred ccEEEEEecchhhcCchhcccchhhhhhhcCeEEEEe---ccCcCcccccHHHHHHHHHHHHHHHHHhcccceeEEEccc
Confidence 6889999996 233333334566667789999999 7777754321 11222233333333333333 56788889
Q ss_pred ChHHHHHHHHHHh-CCcccceEEEEcCC
Q 007536 502 SIGGYFVAIVACL-WPAVVKSVVLINSA 528 (599)
Q Consensus 502 S~Gg~ia~~~a~~-~p~~v~~lvli~~~ 528 (599)
|.|+.+|+.+..+ +..+|.|+++.++.
T Consensus 144 SaGAHLa~qav~R~r~prI~gl~l~~Gv 171 (270)
T KOG4627|consen 144 SAGAHLAAQAVMRQRSPRIWGLILLCGV 171 (270)
T ss_pred chHHHHHHHHHHHhcCchHHHHHHHhhH
Confidence 9999999988765 44589999998875
No 145
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=97.68 E-value=0.00011 Score=75.41 Aligned_cols=90 Identities=22% Similarity=0.265 Sum_probs=62.7
Q ss_pred CCeEEEECCCCCChHHHHHHHHHHHhCCCEEEEEcCCCC--CCCCCCCC---CCCHHHH---HHHHHHHHH---Hh----
Q 007536 427 GPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGF--GRSEKPNI---VYTELMW---SELLRDFTV---EV---- 491 (599)
Q Consensus 427 ~p~vlllHG~~~~~~~w~~~~~~l~~~g~~vi~~D~~G~--G~S~~~~~---~~~~~~~---~~~l~~~l~---~l---- 491 (599)
-|.|||-||.|.+...+..+++.++..||-|.++|+||- |....... .|....| ..++..+|+ ++
T Consensus 71 ~PlvvlshG~Gs~~~~f~~~A~~lAs~Gf~Va~~~hpgs~~~~~~~~~~~~~~~~p~~~~erp~dis~lLd~L~~~~~sP 150 (365)
T COG4188 71 LPLVVLSHGSGSYVTGFAWLAEHLASYGFVVAAPDHPGSNAGGAPAAYAGPGSYAPAEWWERPLDISALLDALLQLTASP 150 (365)
T ss_pred CCeEEecCCCCCCccchhhhHHHHhhCceEEEeccCCCcccccCChhhcCCcccchhhhhcccccHHHHHHHHHHhhcCc
Confidence 578889999999999999999999999999999999984 33332111 1221111 112222222 11
Q ss_pred ------CCCCEEEEEeChHHHHHHHHHHhCC
Q 007536 492 ------VGEPVHLIGNSIGGYFVAIVACLWP 516 (599)
Q Consensus 492 ------~~~~~~lvGhS~Gg~ia~~~a~~~p 516 (599)
...+|.++|||+||..++.++..+.
T Consensus 151 ~l~~~ld~~~Vgv~GhS~GG~T~m~laGA~~ 181 (365)
T COG4188 151 ALAGRLDPQRVGVLGHSFGGYTAMELAGAEL 181 (365)
T ss_pred ccccccCccceEEEecccccHHHHHhccccc
Confidence 2368999999999999999876544
No 146
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=97.64 E-value=0.00024 Score=81.98 Aligned_cols=82 Identities=13% Similarity=-0.039 Sum_probs=64.4
Q ss_pred HHHHHHhCCCEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC--------------------CCCEEEEEeChHH
Q 007536 446 NIYDIADGGNRVWAITLLGFGRSEKPNIVYTELMWSELLRDFTVEVV--------------------GEPVHLIGNSIGG 505 (599)
Q Consensus 446 ~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~--------------------~~~~~lvGhS~Gg 505 (599)
+.+.++.+||.|+..|.||+|.|++....+... -.++..++|+-+. ..+|.++|.|+||
T Consensus 271 ~~~~~~~rGYaVV~~D~RGtg~SeG~~~~~~~~-E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~G 349 (767)
T PRK05371 271 LNDYFLPRGFAVVYVSGIGTRGSDGCPTTGDYQ-EIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSYLG 349 (767)
T ss_pred HHHHHHhCCeEEEEEcCCCCCCCCCcCccCCHH-HHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcHHH
Confidence 457788899999999999999998754333333 2344444555443 3699999999999
Q ss_pred HHHHHHHHhCCcccceEEEEcCC
Q 007536 506 YFVAIVACLWPAVVKSVVLINSA 528 (599)
Q Consensus 506 ~ia~~~a~~~p~~v~~lvli~~~ 528 (599)
.+++.+|...|..++++|.+++.
T Consensus 350 ~~~~~aAa~~pp~LkAIVp~a~i 372 (767)
T PRK05371 350 TLPNAVATTGVEGLETIIPEAAI 372 (767)
T ss_pred HHHHHHHhhCCCcceEEEeeCCC
Confidence 99999999999899999998775
No 147
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=97.63 E-value=0.00013 Score=72.81 Aligned_cols=102 Identities=17% Similarity=0.188 Sum_probs=61.5
Q ss_pred CCeEEEECCCCCChHHH--HHHHHHHHhCC----CEEEEEcCCCCCCCC--C---------CCCCCCH----HHHHHHHH
Q 007536 427 GPAILLVHGFGAFLEHY--RDNIYDIADGG----NRVWAITLLGFGRSE--K---------PNIVYTE----LMWSELLR 485 (599)
Q Consensus 427 ~p~vlllHG~~~~~~~w--~~~~~~l~~~g----~~vi~~D~~G~G~S~--~---------~~~~~~~----~~~~~~l~ 485 (599)
-|+|+++||.......+ ...+..+...| .-+|+++..+.+... . ....-.. ..+.+.|.
T Consensus 24 ~PvlylldG~~~~~~~~~~~~~~~~~~~~~~~~~~iiV~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~el~ 103 (251)
T PF00756_consen 24 YPVLYLLDGQSGWFRNGNAQEALDRLIAEGKIPPMIIVVIPNGDNSRFYTSWYLPAGSSRRADDSGGGDAYETFLTEELI 103 (251)
T ss_dssp EEEEEEESHTTHHHHHHHHHHHHHHHHHHHTSEEEEEEEEESSSTSSTTSBTTSSBCTTCBCTSTTTHHHHHHHHHTHHH
T ss_pred CEEEEEccCCccccccchHHHHHHHHHHhCCCCceEEEEEecccccccccccccccccccccccCCCCcccceehhccch
Confidence 46788999982222222 22344444432 445666665554110 0 0111111 23344455
Q ss_pred HHHHHhC-C--CCEEEEEeChHHHHHHHHHHhCCcccceEEEEcCC
Q 007536 486 DFTVEVV-G--EPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSA 528 (599)
Q Consensus 486 ~~l~~l~-~--~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~ 528 (599)
.+|++.- . .+..|+|+||||..|+.++.+||+.+.+++.+++.
T Consensus 104 p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~ 149 (251)
T PF00756_consen 104 PYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDLFGAVIAFSGA 149 (251)
T ss_dssp HHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTTESEEEEESEE
T ss_pred hHHHHhcccccceeEEeccCCCcHHHHHHHHhCccccccccccCcc
Confidence 5555432 2 33899999999999999999999999999999975
No 148
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=97.62 E-value=0.00058 Score=69.04 Aligned_cols=110 Identities=18% Similarity=0.177 Sum_probs=66.5
Q ss_pred CCEEEEEEEcCC-CCCeEEEECCCCCCh---HHHHHHHHHHHhCCCEEEEEcCC----CCCCCCCCCCCCCHHHHHHHHH
Q 007536 414 NGYQIQYTVAGK-EGPAILLVHGFGAFL---EHYRDNIYDIADGGNRVWAITLL----GFGRSEKPNIVYTELMWSELLR 485 (599)
Q Consensus 414 ~g~~l~y~~~g~-~~p~vlllHG~~~~~---~~w~~~~~~l~~~g~~vi~~D~~----G~G~S~~~~~~~~~~~~~~~l~ 485 (599)
+-..+.|...+. ....||||-|++..- .....+++.|...||.|+-+-+. |+|.+ +++.-+++|.
T Consensus 19 ~~~afe~~~~~~~~~~~llfIGGLtDGl~tvpY~~~La~aL~~~~wsl~q~~LsSSy~G~G~~-------SL~~D~~eI~ 91 (303)
T PF08538_consen 19 KLVAFEFTSSSSSAPNALLFIGGLTDGLLTVPYLPDLAEALEETGWSLFQVQLSSSYSGWGTS-------SLDRDVEEIA 91 (303)
T ss_dssp TTEEEEEEEE-TTSSSEEEEE--TT--TT-STCHHHHHHHHT-TT-EEEEE--GGGBTTS-S---------HHHHHHHHH
T ss_pred CCeEEEecCCCCCCCcEEEEECCCCCCCCCCchHHHHHHHhccCCeEEEEEEecCccCCcCcc-------hhhhHHHHHH
Confidence 344445544443 245899999997653 34567788887678999999765 66644 4555566666
Q ss_pred HHHHHh--------CCCCEEEEEeChHHHHHHHHHHhCC-----cccceEEEEcCCCC
Q 007536 486 DFTVEV--------VGEPVHLIGNSIGGYFVAIVACLWP-----AVVKSVVLINSAGN 530 (599)
Q Consensus 486 ~~l~~l--------~~~~~~lvGhS~Gg~ia~~~a~~~p-----~~v~~lvli~~~~~ 530 (599)
++++.+ +.++|+|+|||-|+.-+++++.... ..|.|+||-+|...
T Consensus 92 ~~v~ylr~~~~g~~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSD 149 (303)
T PF08538_consen 92 QLVEYLRSEKGGHFGREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSD 149 (303)
T ss_dssp HHHHHHHHHS------S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---
T ss_pred HHHHHHHHhhccccCCccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCC
Confidence 555433 2468999999999999999988642 57999999999644
No 149
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.48 E-value=0.0006 Score=69.71 Aligned_cols=103 Identities=18% Similarity=0.282 Sum_probs=69.6
Q ss_pred CCCeEEEECCCCCChH-HHHHHHHHHHhC--CCEEEEEcCCCCCCC-----CCCCCCCCHHHHHHHHHHHHHHhCCCCEE
Q 007536 426 EGPAILLVHGFGAFLE-HYRDNIYDIADG--GNRVWAITLLGFGRS-----EKPNIVYTELMWSELLRDFTVEVVGEPVH 497 (599)
Q Consensus 426 ~~p~vlllHG~~~~~~-~w~~~~~~l~~~--g~~vi~~D~~G~G~S-----~~~~~~~~~~~~~~~l~~~l~~l~~~~~~ 497 (599)
.+..+||+||+..+-. .-...++..... ....+.+.+|--|.- ++....|+-..++..+..+......++++
T Consensus 115 ~k~vlvFvHGfNntf~dav~R~aqI~~d~g~~~~pVvFSWPS~g~l~~Yn~DreS~~~Sr~aLe~~lr~La~~~~~~~I~ 194 (377)
T COG4782 115 AKTVLVFVHGFNNTFEDAVYRTAQIVHDSGNDGVPVVFSWPSRGSLLGYNYDRESTNYSRPALERLLRYLATDKPVKRIY 194 (377)
T ss_pred CCeEEEEEcccCCchhHHHHHHHHHHhhcCCCcceEEEEcCCCCeeeecccchhhhhhhHHHHHHHHHHHHhCCCCceEE
Confidence 3678999999987643 223334433333 367889999966642 22333555556666666655555678999
Q ss_pred EEEeChHHHHHHHHHHh--------CCcccceEEEEcCC
Q 007536 498 LIGNSIGGYFVAIVACL--------WPAVVKSVVLINSA 528 (599)
Q Consensus 498 lvGhS~Gg~ia~~~a~~--------~p~~v~~lvli~~~ 528 (599)
|++||||..++++...+ .+.+++-+|+-+|-
T Consensus 195 ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPD 233 (377)
T COG4782 195 LLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPD 233 (377)
T ss_pred EEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCC
Confidence 99999999999887553 23468888888775
No 150
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=97.46 E-value=0.0006 Score=66.12 Aligned_cols=103 Identities=16% Similarity=0.189 Sum_probs=73.8
Q ss_pred CeEEEECCCCCChHHHHHHHHHHHhCC-----CEEEEEcCCCC----CCCCC----C-------CCCCCHHHHHHHHHHH
Q 007536 428 PAILLVHGFGAFLEHYRDNIYDIADGG-----NRVWAITLLGF----GRSEK----P-------NIVYTELMWSELLRDF 487 (599)
Q Consensus 428 p~vlllHG~~~~~~~w~~~~~~l~~~g-----~~vi~~D~~G~----G~S~~----~-------~~~~~~~~~~~~l~~~ 487 (599)
-|.|||||.+++.......+..|...+ --++.+|--|- |.=++ | ....+..++..++..+
T Consensus 46 iPTIfIhGsgG~asS~~~Mv~ql~~~~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~s~wlk~~ 125 (288)
T COG4814 46 IPTIFIHGSGGTASSLNGMVNQLLPDYKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQSKWLKKA 125 (288)
T ss_pred cceEEEecCCCChhHHHHHHHHhhhcccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEecCcCchhhHHHHHHHH
Confidence 478999999999999999998887752 23555665551 11011 1 1233555667777777
Q ss_pred HHHh----CCCCEEEEEeChHHHHHHHHHHhCCc-----ccceEEEEcCCCC
Q 007536 488 TVEV----VGEPVHLIGNSIGGYFVAIVACLWPA-----VVKSVVLINSAGN 530 (599)
Q Consensus 488 l~~l----~~~~~~lvGhS~Gg~ia~~~a~~~p~-----~v~~lvli~~~~~ 530 (599)
+..| ++..+.+|||||||.-...++..+.. .+..+|.++++..
T Consensus 126 msyL~~~Y~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpfN 177 (288)
T COG4814 126 MSYLQKHYNIPKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPFN 177 (288)
T ss_pred HHHHHHhcCCceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEeccccc
Confidence 7655 56899999999999999999887532 4899999998754
No 151
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=97.45 E-value=0.0002 Score=74.54 Aligned_cols=104 Identities=20% Similarity=0.183 Sum_probs=80.8
Q ss_pred CCeEEEECCCCCChHHHH-----HHHHHHHhCCCEEEEEcCCCCCCCCCCC--CCCCHHHHHHHHHHHHHHhCCCCEEEE
Q 007536 427 GPAILLVHGFGAFLEHYR-----DNIYDIADGGNRVWAITLLGFGRSEKPN--IVYTELMWSELLRDFTVEVVGEPVHLI 499 (599)
Q Consensus 427 ~p~vlllHG~~~~~~~w~-----~~~~~l~~~g~~vi~~D~~G~G~S~~~~--~~~~~~~~~~~l~~~l~~l~~~~~~lv 499 (599)
++|+|++|-+-..-..|+ .++..|.++|+.|..+|+++=..+.... ..|-.+.+.+.+..+.+..+.+++.++
T Consensus 107 ~~PlLiVpP~iNk~yi~Dl~~~~s~V~~l~~~g~~vfvIsw~nPd~~~~~~~~edYi~e~l~~aid~v~~itg~~~Inli 186 (445)
T COG3243 107 KRPLLIVPPWINKFYILDLSPEKSLVRWLLEQGLDVFVISWRNPDASLAAKNLEDYILEGLSEAIDTVKDITGQKDINLI 186 (445)
T ss_pred CCceEeeccccCceeEEeCCCCccHHHHHHHcCCceEEEeccCchHhhhhccHHHHHHHHHHHHHHHHHHHhCcccccee
Confidence 679999999987777664 5788999999999999998766554321 133334445556666666677999999
Q ss_pred EeChHHHHHHHHHHhCCcc-cceEEEEcCCCC
Q 007536 500 GNSIGGYFVAIVACLWPAV-VKSVVLINSAGN 530 (599)
Q Consensus 500 GhS~Gg~ia~~~a~~~p~~-v~~lvli~~~~~ 530 (599)
|+|+||.++..+++.++.+ |++++++.+...
T Consensus 187 GyCvGGtl~~~ala~~~~k~I~S~T~lts~~D 218 (445)
T COG3243 187 GYCVGGTLLAAALALMAAKRIKSLTLLTSPVD 218 (445)
T ss_pred eEecchHHHHHHHHhhhhcccccceeeecchh
Confidence 9999999999999998887 999999887643
No 152
>COG3046 Uncharacterized protein related to deoxyribodipyrimidine photolyase [General function prediction only]
Probab=97.45 E-value=0.0087 Score=61.75 Aligned_cols=258 Identities=16% Similarity=0.130 Sum_probs=138.7
Q ss_pred CcEEEEEcCCCCCCCCHHHHHHHhCCCeEEEEEeCCcccc---cCCHhHHHHHHHHHHHHHHHHHhcCCcEEEEEcCH--
Q 007536 45 GSAVIWFKQDLRVDDHLGLVAASKYQAVVPLYVFDHRILS---RYSNEMLELVIFALEDLRKSLKEQGSDLMIRFGRV-- 119 (599)
Q Consensus 45 ~~~l~WfrrDLRl~DN~aL~~A~~~~~v~~vfi~d~~~~~---~~~~~r~~Fl~~sL~~L~~~L~~~g~~L~v~~g~~-- 119 (599)
+++++|.=.|.=.++++||.. ......++.| +..... ++-..+.-++..+++.+.+.|+..|.......-++
T Consensus 2 ~~~~~lvLgdQL~~~~~al~~--d~~~~~vllv-E~~~~a~~~r~HkqKl~lv~aAMR~Fad~LraeG~~V~Y~~~~~~~ 78 (505)
T COG3046 2 MSSVVLVLGDQLSEDHSALGD--DRSQDGVLLV-ESAAEARYRRHHKQKLVLVFAAMRHFADELRAEGLKVRYERADDNS 78 (505)
T ss_pred CceEEEEeccccccccchhcc--CcccCcEEEe-hhHhHhhhhhcchhhhHHHHHHHHHHHHHHhhCCceeEEEEcCCcc
Confidence 467899999999999988876 2222323333 222211 23456677899999999999999999876665443
Q ss_pred -HHHHHHHHHHhCCcEEEEccccChhHHHHHHHHHHHHHhcccCCCCceeEeeCc-ccccCCCC-----CCCCcchhhHH
Q 007536 120 -ENVIRELVEEVKATSVFAEEEVEYHLRQMMAIVDETLAKVSLVDGKPKICLWQT-PFYDIKNL-----NDLPVSHNEFR 192 (599)
Q Consensus 120 -~~~l~~l~~~~~~~~v~~~~~~~~~~~~~d~~v~~~l~~~gi~~~~~~~~~~~~-~l~~~~~~-----~~~p~~f~~f~ 192 (599)
...|...++.+..+.|+..+.-......+-+.+.. ..|| ++.++.+. -|....++ +..+.....|+
T Consensus 79 ~~~~l~~~l~~~~~d~~~~~~p~~~~l~~~m~~L~~---~~g~----~i~~~~~~~Fl~s~a~f~~w~~~~k~~lme~FY 151 (505)
T COG3046 79 FGGELRRALEAYPGDRVQVQEPGDHRLEARMKSLSM---ALGI----EITEVENPHFLCSRAEFDAWAGDRKPLLMESFY 151 (505)
T ss_pred cchHHHHHHHhcCCCeEEEecCcchhHHHHHHhhhh---hcCc----eeEEecCcceecCHHHhhhhhccCcchhhHHHH
Confidence 45677788889999998877654444444333332 3343 66666654 34444332 33333344444
Q ss_pred hc----cc-cCC--CCCCCC-Cc-----CCCCCCCCCCCCCChhhhhhhhccCcchhhhhhhhhcccchhhHHHHHhhhc
Q 007536 193 KL----QR-PLT--SPILPP-TL-----AGAKLEADWGPLPTFDELKEFVNENPWKLEESWTLINNMSAETILTDKLSKL 259 (599)
Q Consensus 193 k~----~~-~~~--~p~~~p-~l-----~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~g~~~a~~~l~~~~~~~ 259 (599)
+. .. -+. .|..-- .. ..++.++. .|.+ +++..+ +-....++.++++
T Consensus 152 r~mRkr~g~LM~~dqP~GGrWnFDaeNR~~~~pdL~---~P~p--l~fppd----------------~~vq~v~e~Ve~~ 210 (505)
T COG3046 152 RRMRKRTGILMEDDQPEGGRWNFDAENRKKLPPDLL---PPKP--LKFPPD----------------EIVQEVKERVERL 210 (505)
T ss_pred HHHHHhhceeccCCCCCCCcCCcCcccccCCCCcCC---CCCC--CCCCCc----------------chhHHHHHHHHhh
Confidence 43 11 011 110000 00 00000000 0110 111000 0001122222211
Q ss_pred ccccccCCCCCCCCccccCCCccccCCCCccccChHHHHHHHHHHHHhhccCccchHHHHHHhhccccCCCCCCcccccc
Q 007536 260 GKRSKRNLNNQHSPRKRLDKSFFVTDKGNTVGGGTNAVLNALQAYLRYLEGTVRDDWQELQEKLRNAESRDGASFATLFG 339 (599)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gGe~~A~~~L~~fl~~~~~~~~~~Y~~~rn~~r~~~~~~~~~~tS~LS 339 (599)
+..... ...+-.|+--.+.|+..|++|+. -+...-..|++-=. .| ...-..|.||
T Consensus 211 -----f~~~~G-------------~~e~F~wpvtr~~A~~~L~~Fi~-~~L~nFG~yQDam~--~d----~~~L~HSllS 265 (505)
T COG3046 211 -----FPDNFG-------------QVEGFGWPVTRTQALRALKHFIA-DRLPNFGSYQDAMS--AD----DPHLWHSLLS 265 (505)
T ss_pred -----CCCCCC-------------ccccCCCCCCHHHHHHHHHHHHH-HhhhcCCcHHHHHh--cC----CchhHHHHHH
Confidence 111110 00011488889999999999995 22234445554211 11 2235789999
Q ss_pred cchhccccchhHHHHHHhh
Q 007536 340 PALCLGIISRRGVHYEAIK 358 (599)
Q Consensus 340 pyL~~G~IS~R~v~~~v~~ 358 (599)
+||..|.|+|.+|..++.+
T Consensus 266 ~alNigLL~PleVi~Aa~~ 284 (505)
T COG3046 266 FALNIGLLTPLEVIRAALK 284 (505)
T ss_pred HHhhccCCCHHHHHHHHHH
Confidence 9999999999999988854
No 153
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.38 E-value=0.0032 Score=60.98 Aligned_cols=103 Identities=21% Similarity=0.296 Sum_probs=78.2
Q ss_pred CCCeEEEECCCCCChHHHHHHHHHHHhC---CCEEEEEcCCCCCCCC---C------CCCCCCHHHHHHHHHHHHHHhC-
Q 007536 426 EGPAILLVHGFGAFLEHYRDNIYDIADG---GNRVWAITLLGFGRSE---K------PNIVYTELMWSELLRDFTVEVV- 492 (599)
Q Consensus 426 ~~p~vlllHG~~~~~~~w~~~~~~l~~~---g~~vi~~D~~G~G~S~---~------~~~~~~~~~~~~~l~~~l~~l~- 492 (599)
+++.++++.|.+|....|.+++..|... ...++.+...||-.-. . ....++++++.+.-.++++...
T Consensus 28 ~~~li~~IpGNPG~~gFY~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~s~~~~eifsL~~QV~HKlaFik~~~P 107 (301)
T KOG3975|consen 28 DKPLIVWIPGNPGLLGFYTEFARHLHLNLIDRLPVWTISHAGHALMPASLREDHSHTNEEIFSLQDQVDHKLAFIKEYVP 107 (301)
T ss_pred CceEEEEecCCCCchhHHHHHHHHHHHhcccccceeEEeccccccCCcccccccccccccccchhhHHHHHHHHHHHhCC
Confidence 4678999999999999999998887653 1558888888886543 1 1135778888887778887764
Q ss_pred -CCCEEEEEeChHHHHHHHHHHhC-C-cccceEEEEcCC
Q 007536 493 -GEPVHLIGNSIGGYFVAIVACLW-P-AVVKSVVLINSA 528 (599)
Q Consensus 493 -~~~~~lvGhS~Gg~ia~~~a~~~-p-~~v~~lvli~~~ 528 (599)
..+++++|||.|+++.+.+.... + -.|.+++++=|+
T Consensus 108 k~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LFPT 146 (301)
T KOG3975|consen 108 KDRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLFPT 146 (301)
T ss_pred CCCEEEEEecchhHHHHHHHhhhcccccceEEEEEecch
Confidence 36899999999999999987742 2 258888888765
No 154
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.35 E-value=0.0013 Score=72.91 Aligned_cols=101 Identities=18% Similarity=0.170 Sum_probs=62.6
Q ss_pred CCeEEEECCCCCChHHHHHHHHHHHh----------------CCCEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 007536 427 GPAILLVHGFGAFLEHYRDNIYDIAD----------------GGNRVWAITLLGFGRSEKPNIVYTELMWSELLRDFTVE 490 (599)
Q Consensus 427 ~p~vlllHG~~~~~~~w~~~~~~l~~----------------~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~ 490 (599)
|-|||||+|..|+...-+.++..... ..|+..++|.-+-= . .-.+.++.++++.+.+.+..
T Consensus 89 GIPVLFIPGNAGSyKQvRSiAS~a~n~y~~~~~e~t~~~d~~~~~DFFaVDFnEe~--t-Am~G~~l~dQtEYV~dAIk~ 165 (973)
T KOG3724|consen 89 GIPVLFIPGNAGSYKQVRSIASVAQNAYQGGPFEKTEDRDNPFSFDFFAVDFNEEF--T-AMHGHILLDQTEYVNDAIKY 165 (973)
T ss_pred CceEEEecCCCCchHHHHHHHHHHhhhhcCCchhhhhcccCccccceEEEcccchh--h-hhccHhHHHHHHHHHHHHHH
Confidence 67999999999998777766555442 12556666654210 0 00123566666666665543
Q ss_pred h----CC---------CCEEEEEeChHHHHHHHHHHh---CCcccceEEEEcCCCC
Q 007536 491 V----VG---------EPVHLIGNSIGGYFVAIVACL---WPAVVKSVVLINSAGN 530 (599)
Q Consensus 491 l----~~---------~~~~lvGhS~Gg~ia~~~a~~---~p~~v~~lvli~~~~~ 530 (599)
. .. ..++||||||||.+|..++.. .++.|.-++..+++..
T Consensus 166 ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tlkn~~~~sVntIITlssPH~ 221 (973)
T KOG3724|consen 166 ILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTLKNEVQGSVNTIITLSSPHA 221 (973)
T ss_pred HHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhhhhhccchhhhhhhhcCccc
Confidence 2 11 249999999999999665542 2345666777777544
No 155
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=97.35 E-value=0.0012 Score=70.92 Aligned_cols=103 Identities=17% Similarity=0.129 Sum_probs=62.2
Q ss_pred CCeEEEECCCCCChH-HHHHHHHHHHhCC----CEEEEEcCCCC-CCCC-CCCCCCCHHHHHHHHHHHHHHh-C----CC
Q 007536 427 GPAILLVHGFGAFLE-HYRDNIYDIADGG----NRVWAITLLGF-GRSE-KPNIVYTELMWSELLRDFTVEV-V----GE 494 (599)
Q Consensus 427 ~p~vlllHG~~~~~~-~w~~~~~~l~~~g----~~vi~~D~~G~-G~S~-~~~~~~~~~~~~~~l~~~l~~l-~----~~ 494 (599)
-|.|+|+||..-... .-..+++.|.+.| .-++.+|..+. .++. .+....-...+.++|.-++++. . .+
T Consensus 209 ~PvlyllDG~~w~~~~~~~~~ld~li~~g~i~P~ivV~id~~~~~~R~~el~~~~~f~~~l~~eLlP~I~~~y~~~~d~~ 288 (411)
T PRK10439 209 RPLAILLDGQFWAESMPVWPALDSLTHRGQLPPAVYLLIDAIDTTHRSQELPCNADFWLAVQQELLPQVRAIAPFSDDAD 288 (411)
T ss_pred CCEEEEEECHHhhhcCCHHHHHHHHHHcCCCCceEEEEECCCCcccccccCCchHHHHHHHHHHHHHHHHHhCCCCCCcc
Confidence 578889999532111 1123455666555 34677775321 1111 1110101222334444445443 1 25
Q ss_pred CEEEEEeChHHHHHHHHHHhCCcccceEEEEcCCC
Q 007536 495 PVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAG 529 (599)
Q Consensus 495 ~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~~ 529 (599)
+.+|+|+||||..|+.++.++|+.+.+++.+++..
T Consensus 289 ~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs~ 323 (411)
T PRK10439 289 RTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGSF 323 (411)
T ss_pred ceEEEEEChHHHHHHHHHHhCcccccEEEEeccce
Confidence 68999999999999999999999999999999863
No 156
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=97.33 E-value=0.00054 Score=64.84 Aligned_cols=101 Identities=12% Similarity=0.103 Sum_probs=72.0
Q ss_pred CeEEEECCCCCChHHHHHHHHHHHhCCCEEEEEcCCCCCCC--------C----------CCCCCCCHHHHHHHHHHHHH
Q 007536 428 PAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRS--------E----------KPNIVYTELMWSELLRDFTV 489 (599)
Q Consensus 428 p~vlllHG~~~~~~~w~~~~~~l~~~g~~vi~~D~~G~G~S--------~----------~~~~~~~~~~~~~~l~~~l~ 489 (599)
.+||++||.+.+...|..+++.|.-.+..-|+|.-|-.-.+ . .+...-.....++.+..+++
T Consensus 4 atIi~LHglGDsg~~~~~~~~~l~l~NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~~~~~~d~~~~~~aa~~i~~Li~ 83 (206)
T KOG2112|consen 4 ATIIFLHGLGDSGSGWAQFLKQLPLPNIKWICPTAPSRPVTLNGGAFMNAWFDIMELSSDAPEDEEGLHRAADNIANLID 83 (206)
T ss_pred EEEEEEecCCCCCccHHHHHHcCCCCCeeEEcCCCCCCcccccCCCcccceecceeeCcccchhhhHHHHHHHHHHHHHH
Confidence 47999999999999998888887656677788754421111 0 01112234445566666665
Q ss_pred Hh---C--CCCEEEEEeChHHHHHHHHHHhCCcccceEEEEcCC
Q 007536 490 EV---V--GEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSA 528 (599)
Q Consensus 490 ~l---~--~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~ 528 (599)
+. + ..++.+-|.||||++++..+..+|..+.+++...+.
T Consensus 84 ~e~~~Gi~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~~~s~~ 127 (206)
T KOG2112|consen 84 NEPANGIPSNRIGIGGFSQGGALALYSALTYPKALGGIFALSGF 127 (206)
T ss_pred HHHHcCCCccceeEcccCchHHHHHHHHhccccccceeeccccc
Confidence 43 2 267999999999999999999999888888877764
No 157
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=97.29 E-value=0.0067 Score=62.64 Aligned_cols=104 Identities=20% Similarity=0.187 Sum_probs=69.0
Q ss_pred CCeEEEECCCCCChH---HHHHHHHHHHhCCCEEEEEcCCC--CCCCC----------C----CCCCC------------
Q 007536 427 GPAILLVHGFGAFLE---HYRDNIYDIADGGNRVWAITLLG--FGRSE----------K----PNIVY------------ 475 (599)
Q Consensus 427 ~p~vlllHG~~~~~~---~w~~~~~~l~~~g~~vi~~D~~G--~G~S~----------~----~~~~~------------ 475 (599)
.-.||+|||.+.+.. .-.++-..|.+.||+++.+.+|. ...+. . .....
T Consensus 87 ~G~vIilp~~g~~~d~p~~i~~LR~~L~~~GW~Tlsit~P~~~~~~~p~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~ 166 (310)
T PF12048_consen 87 QGAVIILPDWGEHPDWPGLIAPLRRELPDHGWATLSITLPDPAPPASPNRATEAEEVPSAGDQQLSQPSDEPSPASAQEA 166 (310)
T ss_pred ceEEEEecCCCCCCCcHhHHHHHHHHhhhcCceEEEecCCCcccccCCccCCCCCCCCCCCCCCcCCCCCCCccccccHh
Confidence 458999999988753 34556677888999999999987 11000 0 00000
Q ss_pred -C----HHHHHHHHHH---HHHHhCCCCEEEEEeChHHHHHHHHHHhCCc-ccceEEEEcCCCC
Q 007536 476 -T----ELMWSELLRD---FTVEVVGEPVHLIGNSIGGYFVAIVACLWPA-VVKSVVLINSAGN 530 (599)
Q Consensus 476 -~----~~~~~~~l~~---~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~-~v~~lvli~~~~~ 530 (599)
. ...+...+.+ ++...+..+++||||+.|+..++.+....+. .+.++|+|++-..
T Consensus 167 ~~~~~~~~~~~ari~Aa~~~~~~~~~~~ivlIg~G~gA~~~~~~la~~~~~~~daLV~I~a~~p 230 (310)
T PF12048_consen 167 EAREAYEERLFARIEAAIAFAQQQGGKNIVLIGHGTGAGWAARYLAEKPPPMPDALVLINAYWP 230 (310)
T ss_pred HHhHHHHHHHHHHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHhcCCCcccCeEEEEeCCCC
Confidence 0 1122222333 3334455669999999999999999998764 5999999998543
No 158
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=97.24 E-value=0.0026 Score=69.17 Aligned_cols=123 Identities=22% Similarity=0.296 Sum_probs=73.4
Q ss_pred CCceeEEEEEECCEEEEEEEcCCCCCeEEEECCCCCChH-HH--HHHHHHHHhC-CCEEEEEcCCCCCCCCCCC------
Q 007536 403 EGVYSTRIWRWNGYQIQYTVAGKEGPAILLVHGFGAFLE-HY--RDNIYDIADG-GNRVWAITLLGFGRSEKPN------ 472 (599)
Q Consensus 403 ~~~~~~~~~~~~g~~l~y~~~g~~~p~vlllHG~~~~~~-~w--~~~~~~l~~~-g~~vi~~D~~G~G~S~~~~------ 472 (599)
.+.+..|++..+.. +.+++|.+|++ |.-++.. .| ..++..|+++ |--++++.+|-+|.|.+..
T Consensus 11 ~~tf~qRY~~n~~~------~~~~gpifl~~-ggE~~~~~~~~~~~~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~s~~n 83 (434)
T PF05577_consen 11 NGTFSQRYWVNDQY------YKPGGPIFLYI-GGEGPIEPFWINNGFMWELAKEFGALVVALEHRYYGKSQPFGDLSTEN 83 (434)
T ss_dssp T-EEEEEEEEE-TT--------TTSEEEEEE---SS-HHHHHHH-HHHHHHHHHHTEEEEEE--TTSTTB-TTGGGGGST
T ss_pred CCeEEEEEEEEhhh------cCCCCCEEEEE-CCCCccchhhhcCChHHHHHHHcCCcEEEeehhhhcCCCCccccchhh
Confidence 44555565554432 12235655666 4444432 22 2244455543 6789999999999997422
Q ss_pred -CCCCHHHHHHHHHHHHHHhC-------CCCEEEEEeChHHHHHHHHHHhCCcccceEEEEcCCCCCC
Q 007536 473 -IVYTELMWSELLRDFTVEVV-------GEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVI 532 (599)
Q Consensus 473 -~~~~~~~~~~~l~~~l~~l~-------~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~~~~~ 532 (599)
.-.+.++..+|+..++..+. ..|++++|-|.||++|..+-.+||+.|.|.+.-+++....
T Consensus 84 L~yLt~~QALaD~a~F~~~~~~~~~~~~~~pwI~~GgSY~G~Laaw~r~kyP~~~~ga~ASSapv~a~ 151 (434)
T PF05577_consen 84 LRYLTSEQALADLAYFIRYVKKKYNTAPNSPWIVFGGSYGGALAAWFRLKYPHLFDGAWASSAPVQAK 151 (434)
T ss_dssp TTC-SHHHHHHHHHHHHHHHHHHTTTGCC--EEEEEETHHHHHHHHHHHH-TTT-SEEEEET--CCHC
T ss_pred HHhcCHHHHHHHHHHHHHHHHHhhcCCCCCCEEEECCcchhHHHHHHHhhCCCeeEEEEeccceeeee
Confidence 24577777888888876543 2589999999999999999999999999999988875543
No 159
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=97.18 E-value=0.00086 Score=71.65 Aligned_cols=84 Identities=21% Similarity=0.256 Sum_probs=57.8
Q ss_pred HHHHHHHHHHhCCCEE----E-E-EcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh---CCCCEEEEEeChHHHHHHHHH
Q 007536 442 HYRDNIYDIADGGNRV----W-A-ITLLGFGRSEKPNIVYTELMWSELLRDFTVEV---VGEPVHLIGNSIGGYFVAIVA 512 (599)
Q Consensus 442 ~w~~~~~~l~~~g~~v----i-~-~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l---~~~~~~lvGhS~Gg~ia~~~a 512 (599)
.|..+++.|.+.||.. . + +|+| .| +. ..+.....+...++.. ..++++||||||||.++..+.
T Consensus 66 ~~~~li~~L~~~GY~~~~~l~~~pYDWR---~~--~~---~~~~~~~~lk~~ie~~~~~~~~kv~li~HSmGgl~~~~fl 137 (389)
T PF02450_consen 66 YFAKLIENLEKLGYDRGKDLFAAPYDWR---LS--PA---ERDEYFTKLKQLIEEAYKKNGKKVVLIAHSMGGLVARYFL 137 (389)
T ss_pred hHHHHHHHHHhcCcccCCEEEEEeechh---hc--hh---hHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCchHHHHHH
Confidence 8999999999877632 2 2 5666 11 11 2233444444444432 368999999999999999988
Q ss_pred HhCCc------ccceEEEEcCCCCCCC
Q 007536 513 CLWPA------VVKSVVLINSAGNVIP 533 (599)
Q Consensus 513 ~~~p~------~v~~lvli~~~~~~~~ 533 (599)
...+. .|+++|.++++....+
T Consensus 138 ~~~~~~~W~~~~i~~~i~i~~p~~Gs~ 164 (389)
T PF02450_consen 138 QWMPQEEWKDKYIKRFISIGTPFGGSP 164 (389)
T ss_pred HhccchhhHHhhhhEEEEeCCCCCCCh
Confidence 87643 5999999999755443
No 160
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=97.15 E-value=0.0026 Score=65.91 Aligned_cols=102 Identities=19% Similarity=0.069 Sum_probs=71.0
Q ss_pred CCeEEEECCCCC-----ChHHHHHHHHHHHh-CCCEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHH----h--CCC
Q 007536 427 GPAILLVHGFGA-----FLEHYRDNIYDIAD-GGNRVWAITLLGFGRSEKPNIVYTELMWSELLRDFTVE----V--VGE 494 (599)
Q Consensus 427 ~p~vlllHG~~~-----~~~~w~~~~~~l~~-~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~----l--~~~ 494 (599)
.|.||++||+|- .+..+..+...++. .+.-|+.+|+| .....+.+...++..+.+.-+.+. . +.+
T Consensus 90 ~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYR---LAPEh~~Pa~y~D~~~Al~w~~~~~~~~~~~D~~ 166 (336)
T KOG1515|consen 90 LPVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYR---LAPEHPFPAAYDDGWAALKWVLKNSWLKLGADPS 166 (336)
T ss_pred ceEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCcc---cCCCCCCCccchHHHHHHHHHHHhHHHHhCCCcc
Confidence 578999999862 35567777777754 47899999998 333222233445555555544443 2 237
Q ss_pred CEEEEEeChHHHHHHHHHHhC------CcccceEEEEcCCCCC
Q 007536 495 PVHLIGNSIGGYFVAIVACLW------PAVVKSVVLINSAGNV 531 (599)
Q Consensus 495 ~~~lvGhS~Gg~ia~~~a~~~------p~~v~~lvli~~~~~~ 531 (599)
+++|+|-|.||.+|..+|.+. +-+++|.|++-|....
T Consensus 167 rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~~ 209 (336)
T KOG1515|consen 167 RVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQG 209 (336)
T ss_pred cEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccCC
Confidence 899999999999999887652 3579999999997543
No 161
>PLN02606 palmitoyl-protein thioesterase
Probab=97.14 E-value=0.0038 Score=63.10 Aligned_cols=101 Identities=13% Similarity=0.131 Sum_probs=63.3
Q ss_pred CCeEEEECCCC--CChHHHHHHHHHHHhC-CCEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC--CCCEEEEEe
Q 007536 427 GPAILLVHGFG--AFLEHYRDNIYDIADG-GNRVWAITLLGFGRSEKPNIVYTELMWSELLRDFTVEVV--GEPVHLIGN 501 (599)
Q Consensus 427 ~p~vlllHG~~--~~~~~w~~~~~~l~~~-g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~--~~~~~lvGh 501 (599)
..|||+.||+| .+...+..+.+.+.+. |+-+..+- .|-|.. ..--..+..+++.+.+-+.... .+-+++||+
T Consensus 26 ~~PvViwHGlgD~~~~~~~~~~~~~i~~~~~~pg~~v~-ig~~~~--~s~~~~~~~Qv~~vce~l~~~~~L~~G~naIGf 102 (306)
T PLN02606 26 SVPFVLFHGFGGECSNGKVSNLTQFLINHSGYPGTCVE-IGNGVQ--DSLFMPLRQQASIACEKIKQMKELSEGYNIVAE 102 (306)
T ss_pred CCCEEEECCCCcccCCchHHHHHHHHHhCCCCCeEEEE-ECCCcc--cccccCHHHHHHHHHHHHhcchhhcCceEEEEE
Confidence 56899999999 4455677777777522 55444443 232221 1111233333333333332211 146999999
Q ss_pred ChHHHHHHHHHHhCCc--ccceEEEEcCCCC
Q 007536 502 SIGGYFVAIVACLWPA--VVKSVVLINSAGN 530 (599)
Q Consensus 502 S~Gg~ia~~~a~~~p~--~v~~lvli~~~~~ 530 (599)
|.||.++-.++.+.|+ .|+.+|.++++..
T Consensus 103 SQGglflRa~ierc~~~p~V~nlISlggph~ 133 (306)
T PLN02606 103 SQGNLVARGLIEFCDNAPPVINYVSLGGPHA 133 (306)
T ss_pred cchhHHHHHHHHHCCCCCCcceEEEecCCcC
Confidence 9999999999999887 5999999998643
No 162
>COG3150 Predicted esterase [General function prediction only]
Probab=97.10 E-value=0.0015 Score=59.44 Aligned_cols=91 Identities=21% Similarity=0.268 Sum_probs=66.6
Q ss_pred EEEECCCCCChHHHHHHH--HHHHhCCCEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCEEEEEeChHHHH
Q 007536 430 ILLVHGFGAFLEHYRDNI--YDIADGGNRVWAITLLGFGRSEKPNIVYTELMWSELLRDFTVEVVGEPVHLIGNSIGGYF 507 (599)
Q Consensus 430 vlllHG~~~~~~~w~~~~--~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~lvGhS~Gg~i 507 (599)
||+||||..|....+.+. +.+ ..|.|-.+.|.. .....+...++.+..++.+.+.+...|||-|+||+.
T Consensus 2 ilYlHGFnSSP~shka~l~~q~~--------~~~~~~i~y~~p-~l~h~p~~a~~ele~~i~~~~~~~p~ivGssLGGY~ 72 (191)
T COG3150 2 ILYLHGFNSSPGSHKAVLLLQFI--------DEDVRDIEYSTP-HLPHDPQQALKELEKAVQELGDESPLIVGSSLGGYY 72 (191)
T ss_pred eEEEecCCCCcccHHHHHHHHHH--------hccccceeeecC-CCCCCHHHHHHHHHHHHHHcCCCCceEEeecchHHH
Confidence 799999988877766532 223 234444455543 224577888889999999998888999999999999
Q ss_pred HHHHHHhCCcccceEEEEcCCCCCC
Q 007536 508 VAIVACLWPAVVKSVVLINSAGNVI 532 (599)
Q Consensus 508 a~~~a~~~p~~v~~lvli~~~~~~~ 532 (599)
|-.++.++. ++ .|+++|+..+.
T Consensus 73 At~l~~~~G--ir-av~~NPav~P~ 94 (191)
T COG3150 73 ATWLGFLCG--IR-AVVFNPAVRPY 94 (191)
T ss_pred HHHHHHHhC--Ch-hhhcCCCcCch
Confidence 999998874 44 45678876544
No 163
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=97.07 E-value=0.0032 Score=64.79 Aligned_cols=103 Identities=19% Similarity=0.189 Sum_probs=73.9
Q ss_pred CCCeEEEECCCCCChHHHHH-H-HHHHHhCCCEEEEEcCCCCCCCCCCCC----CCCHHHH----------HHHHHHHHH
Q 007536 426 EGPAILLVHGFGAFLEHYRD-N-IYDIADGGNRVWAITLLGFGRSEKPNI----VYTELMW----------SELLRDFTV 489 (599)
Q Consensus 426 ~~p~vlllHG~~~~~~~w~~-~-~~~l~~~g~~vi~~D~~G~G~S~~~~~----~~~~~~~----------~~~l~~~l~ 489 (599)
.+|.+|.++|-|.+....+. + +..|.++|+..+.+..|-||.-.+... -.+..++ +..+...++
T Consensus 91 ~rp~~IhLagTGDh~f~rR~~l~a~pLl~~gi~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl~~~g~~~i~E~~~Ll~Wl~ 170 (348)
T PF09752_consen 91 YRPVCIHLAGTGDHGFWRRRRLMARPLLKEGIASLILENPYYGQRKPKDQRRSSLRNVSDLFVMGRATILESRALLHWLE 170 (348)
T ss_pred CCceEEEecCCCccchhhhhhhhhhHHHHcCcceEEEecccccccChhHhhcccccchhHHHHHHhHHHHHHHHHHHHHH
Confidence 47889999999886554432 3 678888899999999999997543221 1111111 112233344
Q ss_pred HhCCCCEEEEEeChHHHHHHHHHHhCCcccceEEEEcCC
Q 007536 490 EVVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSA 528 (599)
Q Consensus 490 ~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~ 528 (599)
+.+..++.|.|.||||.+|...|+.+|..|..+-++++.
T Consensus 171 ~~G~~~~g~~G~SmGG~~A~laa~~~p~pv~~vp~ls~~ 209 (348)
T PF09752_consen 171 REGYGPLGLTGISMGGHMAALAASNWPRPVALVPCLSWS 209 (348)
T ss_pred hcCCCceEEEEechhHhhHHhhhhcCCCceeEEEeeccc
Confidence 556789999999999999999999999988877777764
No 164
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=97.06 E-value=0.0029 Score=68.61 Aligned_cols=102 Identities=18% Similarity=0.100 Sum_probs=74.0
Q ss_pred CCCeEEEECCCCCCh---HHH--HHH--HHHHHhCCCEEEEEcCCCCCCCCC--------CCCCCCHHHHHHHHHHHHHH
Q 007536 426 EGPAILLVHGFGAFL---EHY--RDN--IYDIADGGNRVWAITLLGFGRSEK--------PNIVYTELMWSELLRDFTVE 490 (599)
Q Consensus 426 ~~p~vlllHG~~~~~---~~w--~~~--~~~l~~~g~~vi~~D~~G~G~S~~--------~~~~~~~~~~~~~l~~~l~~ 490 (599)
+-|+|+++=|.++-. ..| ... ...|+..||-|+.+|-||.-.-.. .-+...++++++-+.-+.++
T Consensus 641 kYptvl~VYGGP~VQlVnnsfkgi~ylR~~~LaslGy~Vv~IDnRGS~hRGlkFE~~ik~kmGqVE~eDQVeglq~Laeq 720 (867)
T KOG2281|consen 641 KYPTVLNVYGGPGVQLVNNSFKGIQYLRFCRLASLGYVVVFIDNRGSAHRGLKFESHIKKKMGQVEVEDQVEGLQMLAEQ 720 (867)
T ss_pred CCceEEEEcCCCceEEeeccccceehhhhhhhhhcceEEEEEcCCCccccchhhHHHHhhccCeeeehhhHHHHHHHHHh
Confidence 357899999987632 223 222 346788899999999998754431 11344677788877777776
Q ss_pred hCC---CCEEEEEeChHHHHHHHHHHhCCcccceEEEEcC
Q 007536 491 VVG---EPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINS 527 (599)
Q Consensus 491 l~~---~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~ 527 (599)
.+. ++|.|-|+|.||.++++...+||+-++..|.=+|
T Consensus 721 ~gfidmdrV~vhGWSYGGYLSlm~L~~~P~IfrvAIAGap 760 (867)
T KOG2281|consen 721 TGFIDMDRVGVHGWSYGGYLSLMGLAQYPNIFRVAIAGAP 760 (867)
T ss_pred cCcccchheeEeccccccHHHHHHhhcCcceeeEEeccCc
Confidence 643 8999999999999999999999986665554433
No 165
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=97.05 E-value=0.0014 Score=72.46 Aligned_cols=103 Identities=18% Similarity=0.158 Sum_probs=66.3
Q ss_pred CCCeEEEECCCCC---ChHHHHHHHHHHHhC-C-CEEEEEcCC----CCCCCCCC--CCCCCHHHH---HHHHHHHHHHh
Q 007536 426 EGPAILLVHGFGA---FLEHYRDNIYDIADG-G-NRVWAITLL----GFGRSEKP--NIVYTELMW---SELLRDFTVEV 491 (599)
Q Consensus 426 ~~p~vlllHG~~~---~~~~w~~~~~~l~~~-g-~~vi~~D~~----G~G~S~~~--~~~~~~~~~---~~~l~~~l~~l 491 (599)
..|+||+|||.+- +...+ ....|+.. + +.|+.+++| |+..+... ...+.+.++ .+++.+-++..
T Consensus 94 ~~pv~v~ihGG~~~~g~~~~~--~~~~~~~~~~~~~vv~~~yRlg~~g~~~~~~~~~~~n~g~~D~~~al~wv~~~i~~f 171 (493)
T cd00312 94 SLPVMVWIHGGGFMFGSGSLY--PGDGLAREGDNVIVVSINYRLGVLGFLSTGDIELPGNYGLKDQRLALKWVQDNIAAF 171 (493)
T ss_pred CCCEEEEEcCCccccCCCCCC--ChHHHHhcCCCEEEEEecccccccccccCCCCCCCcchhHHHHHHHHHHHHHHHHHh
Confidence 4689999999642 22222 22344433 3 899999998 44433221 122333333 44555666666
Q ss_pred CC--CCEEEEEeChHHHHHHHHHHh--CCcccceEEEEcCCCC
Q 007536 492 VG--EPVHLIGNSIGGYFVAIVACL--WPAVVKSVVLINSAGN 530 (599)
Q Consensus 492 ~~--~~~~lvGhS~Gg~ia~~~a~~--~p~~v~~lvli~~~~~ 530 (599)
++ ++|.|+|+|.||..+..++.. .+..++++|++++...
T Consensus 172 ggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~~ 214 (493)
T cd00312 172 GGDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSAL 214 (493)
T ss_pred CCCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCCcc
Confidence 65 579999999999999887765 2456899999987643
No 166
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=97.01 E-value=0.0059 Score=70.49 Aligned_cols=122 Identities=15% Similarity=0.032 Sum_probs=87.1
Q ss_pred eEEEEEECCEEEEEEEcCCC-------CCeEEEECCCCCChH-------HHHHHHHHHHhCCCEEEEEcCCCCCCCCCC-
Q 007536 407 STRIWRWNGYQIQYTVAGKE-------GPAILLVHGFGAFLE-------HYRDNIYDIADGGNRVWAITLLGFGRSEKP- 471 (599)
Q Consensus 407 ~~~~~~~~g~~l~y~~~g~~-------~p~vlllHG~~~~~~-------~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~- 471 (599)
....+..+|+..++...-|. -|.||.+||.+++.. .|..+ .....|+.|+.+|.||.|.....
T Consensus 499 ~~~~i~~~~~~~~~~~~lP~~~~~~~kyPllv~~yGGP~sq~v~~~~~~~~~~~--~~s~~g~~v~~vd~RGs~~~G~~~ 576 (755)
T KOG2100|consen 499 EFGKIEIDGITANAILILPPNFDPSKKYPLLVVVYGGPGSQSVTSKFSVDWNEV--VVSSRGFAVLQVDGRGSGGYGWDF 576 (755)
T ss_pred eeEEEEeccEEEEEEEecCCCCCCCCCCCEEEEecCCCCcceeeeeEEecHHHH--hhccCCeEEEEEcCCCcCCcchhH
Confidence 33456669999888764431 366788899987332 24333 34566999999999998876432
Q ss_pred -------CCCCCHHHHHHHHHHHHHHhCC--CCEEEEEeChHHHHHHHHHHhCCcccceE-EEEcCCCC
Q 007536 472 -------NIVYTELMWSELLRDFTVEVVG--EPVHLIGNSIGGYFVAIVACLWPAVVKSV-VLINSAGN 530 (599)
Q Consensus 472 -------~~~~~~~~~~~~l~~~l~~l~~--~~~~lvGhS~Gg~ia~~~a~~~p~~v~~l-vli~~~~~ 530 (599)
-+....+++...+..+++..-+ +++.|.|+|.||.+++.++...|+.+-+. |.++|...
T Consensus 577 ~~~~~~~lG~~ev~D~~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~~~~~~fkcgvavaPVtd 645 (755)
T KOG2100|consen 577 RSALPRNLGDVEVKDQIEAVKKVLKLPFIDRSRVAIWGWSYGGYLTLKLLESDPGDVFKCGVAVAPVTD 645 (755)
T ss_pred HHHhhhhcCCcchHHHHHHHHHHHhcccccHHHeEEeccChHHHHHHHHhhhCcCceEEEEEEecceee
Confidence 1345667777777777765544 67999999999999999999998665555 88988644
No 167
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=96.98 E-value=0.0037 Score=60.91 Aligned_cols=103 Identities=21% Similarity=0.157 Sum_probs=53.8
Q ss_pred CCeEEEECCCCCChHHHHHHHHH----HHhCCCEEEEEcCCC-----CCCCC------------CC------C-----CC
Q 007536 427 GPAILLVHGFGAFLEHYRDNIYD----IADGGNRVWAITLLG-----FGRSE------------KP------N-----IV 474 (599)
Q Consensus 427 ~p~vlllHG~~~~~~~w~~~~~~----l~~~g~~vi~~D~~G-----~G~S~------------~~------~-----~~ 474 (599)
++-||+|||++++...++..... |.+.++..+.+|-|- -|... .+ . ..
T Consensus 4 k~riLcLHG~~~na~if~~q~~~l~~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~ 83 (212)
T PF03959_consen 4 KPRILCLHGYGQNAEIFRQQTSALRKALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDDDHEY 83 (212)
T ss_dssp --EEEEE--TT--HHHHHHHTHHHHHHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S-SGGG
T ss_pred CceEEEeCCCCcCHHHHHHHHHHHHHHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCCcccc
Confidence 67899999999999999876544 444268999988752 11110 00 0 01
Q ss_pred CCHHHHHHHHHHHHHHhCCCCEEEEEeChHHHHHHHHHHhC--------CcccceEEEEcCCCC
Q 007536 475 YTELMWSELLRDFTVEVVGEPVHLIGNSIGGYFVAIVACLW--------PAVVKSVVLINSAGN 530 (599)
Q Consensus 475 ~~~~~~~~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~--------p~~v~~lvli~~~~~ 530 (599)
..++...+.|.+++++.+. =.-|+|+|.||.+|..++... ...++-+|++++...
T Consensus 84 ~~~~~sl~~l~~~i~~~GP-fdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p 146 (212)
T PF03959_consen 84 EGLDESLDYLRDYIEENGP-FDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPP 146 (212)
T ss_dssp ---HHHHHHHHHHHHHH----SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES----
T ss_pred cCHHHHHHHHHHHHHhcCC-eEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCC
Confidence 2344555566666666442 356999999999999888642 124788999988644
No 168
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=96.91 E-value=0.0023 Score=69.82 Aligned_cols=120 Identities=15% Similarity=0.031 Sum_probs=80.9
Q ss_pred EEECCEEEEEEEcCCC----CCeEEEECCCCCChH---HH--HHHHH---HHHhCCCEEEEEcCCCCCCCCCCCCCCCH-
Q 007536 411 WRWNGYQIQYTVAGKE----GPAILLVHGFGAFLE---HY--RDNIY---DIADGGNRVWAITLLGFGRSEKPNIVYTE- 477 (599)
Q Consensus 411 ~~~~g~~l~y~~~g~~----~p~vlllHG~~~~~~---~w--~~~~~---~l~~~g~~vi~~D~~G~G~S~~~~~~~~~- 477 (599)
..-||++|+...+-+. .|+++..+-++-... .+ ....+ .++.+||.|+..|.||.|.|++.-..+..
T Consensus 25 ~MRDGvrL~~dIy~Pa~~g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~aa~GYavV~qDvRG~~~SeG~~~~~~~~ 104 (563)
T COG2936 25 PMRDGVRLAADIYRPAGAGPLPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFAAQGYAVVNQDVRGRGGSEGVFDPESSR 104 (563)
T ss_pred EecCCeEEEEEEEccCCCCCCceeEEeeccccccccccCcchhhcccccceeecCceEEEEecccccccCCcccceeccc
Confidence 3349999987765443 467777772221111 11 11233 57788999999999999999875432222
Q ss_pred -HHHHHHHHHHHHHh--CCCCEEEEEeChHHHHHHHHHHhCCcccceEEEEcCCCC
Q 007536 478 -LMWSELLRDFTVEV--VGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGN 530 (599)
Q Consensus 478 -~~~~~~l~~~l~~l--~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~~~ 530 (599)
..-..|+.+.+.+. ...+|..+|.|++|...+.+|+..|..+++++...+...
T Consensus 105 E~~Dg~D~I~Wia~QpWsNG~Vgm~G~SY~g~tq~~~Aa~~pPaLkai~p~~~~~D 160 (563)
T COG2936 105 EAEDGYDTIEWLAKQPWSNGNVGMLGLSYLGFTQLAAAALQPPALKAIAPTEGLVD 160 (563)
T ss_pred cccchhHHHHHHHhCCccCCeeeeecccHHHHHHHHHHhcCCchheeecccccccc
Confidence 11122444444443 347899999999999999999999888999988887644
No 169
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=96.80 E-value=0.015 Score=62.67 Aligned_cols=126 Identities=18% Similarity=0.113 Sum_probs=82.4
Q ss_pred CCceeEEEEEEC---CEEEEEEEcCC-----CCCeEEEECCCCCChHHHHHHHH-------------------HHHhCCC
Q 007536 403 EGVYSTRIWRWN---GYQIQYTVAGK-----EGPAILLVHGFGAFLEHYRDNIY-------------------DIADGGN 455 (599)
Q Consensus 403 ~~~~~~~~~~~~---g~~l~y~~~g~-----~~p~vlllHG~~~~~~~w~~~~~-------------------~l~~~g~ 455 (599)
......-+++++ +..|+|.-... +.|.||++.|.+|.+..|-.+.+ ...+ -.
T Consensus 8 ~~~~~sGyl~~~~~~~~~lfyw~~~s~~~~~~~Pl~~wlnGGPG~SS~~g~f~e~GP~~~~~~~~~~l~~n~~sW~~-~a 86 (415)
T PF00450_consen 8 PFKQYSGYLPVNDNENAHLFYWFFESRNDPEDDPLILWLNGGPGCSSMWGLFGENGPFRINPDGPYTLEDNPYSWNK-FA 86 (415)
T ss_dssp SSEEEEEEEEECTTTTEEEEEEEEE-SSGGCSS-EEEEEE-TTTB-THHHHHCTTSSEEEETTSTSEEEE-TT-GGG-TS
T ss_pred CceEEEEEEecCCCCCcEEEEEEEEeCCCCCCccEEEEecCCceeccccccccccCceEEeeccccccccccccccc-cc
Confidence 334445677777 67888865432 26889999999999888754422 1222 37
Q ss_pred EEEEEcCC-CCCCCCCCCC---CCCHHHHHHHHHHHHHHh-------CCCCEEEEEeChHHHHHHHHHHh----C-----
Q 007536 456 RVWAITLL-GFGRSEKPNI---VYTELMWSELLRDFTVEV-------VGEPVHLIGNSIGGYFVAIVACL----W----- 515 (599)
Q Consensus 456 ~vi~~D~~-G~G~S~~~~~---~~~~~~~~~~l~~~l~~l-------~~~~~~lvGhS~Gg~ia~~~a~~----~----- 515 (599)
+++.+|.| |.|.|..... ..+.+..++++.++|... ...+++|.|-|.||..+-.+|.. .
T Consensus 87 n~l~iD~PvGtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~ 166 (415)
T PF00450_consen 87 NLLFIDQPVGTGFSYGNDPSDYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQ 166 (415)
T ss_dssp EEEEE--STTSTT-EESSGGGGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--S
T ss_pred ceEEEeecCceEEeeccccccccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhccccccc
Confidence 89999966 9999965443 346777788777777654 33589999999999987776653 2
Q ss_pred -CcccceEEEEcCCC
Q 007536 516 -PAVVKSVVLINSAG 529 (599)
Q Consensus 516 -p~~v~~lvli~~~~ 529 (599)
+-.++|+++.++..
T Consensus 167 ~~inLkGi~IGng~~ 181 (415)
T PF00450_consen 167 PKINLKGIAIGNGWI 181 (415)
T ss_dssp TTSEEEEEEEESE-S
T ss_pred cccccccceecCccc
Confidence 34588999988753
No 170
>PLN02633 palmitoyl protein thioesterase family protein
Probab=96.79 E-value=0.011 Score=59.74 Aligned_cols=101 Identities=10% Similarity=0.167 Sum_probs=62.2
Q ss_pred CCeEEEECCCCCChH--HHHHHHHHHHh-CCCEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC--CCCEEEEEe
Q 007536 427 GPAILLVHGFGAFLE--HYRDNIYDIAD-GGNRVWAITLLGFGRSEKPNIVYTELMWSELLRDFTVEVV--GEPVHLIGN 501 (599)
Q Consensus 427 ~p~vlllHG~~~~~~--~w~~~~~~l~~-~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~--~~~~~lvGh 501 (599)
..|+|+.||+|.+.. ....+.+.+.. .|..+.++.. |.+....--..+..+++.+.+-+.... .+-+++||+
T Consensus 25 ~~P~ViwHG~GD~c~~~g~~~~~~l~~~~~g~~~~~i~i---g~~~~~s~~~~~~~Qve~vce~l~~~~~l~~G~naIGf 101 (314)
T PLN02633 25 SVPFIMLHGIGTQCSDATNANFTQLLTNLSGSPGFCLEI---GNGVGDSWLMPLTQQAEIACEKVKQMKELSQGYNIVGR 101 (314)
T ss_pred CCCeEEecCCCcccCCchHHHHHHHHHhCCCCceEEEEE---CCCccccceeCHHHHHHHHHHHHhhchhhhCcEEEEEE
Confidence 568999999998754 33344444433 2555555532 333221112233333333333333211 146999999
Q ss_pred ChHHHHHHHHHHhCCc--ccceEEEEcCCCC
Q 007536 502 SIGGYFVAIVACLWPA--VVKSVVLINSAGN 530 (599)
Q Consensus 502 S~Gg~ia~~~a~~~p~--~v~~lvli~~~~~ 530 (599)
|.||.++-.++.+.|+ .|+.+|.++++..
T Consensus 102 SQGGlflRa~ierc~~~p~V~nlISlggph~ 132 (314)
T PLN02633 102 SQGNLVARGLIEFCDGGPPVYNYISLAGPHA 132 (314)
T ss_pred ccchHHHHHHHHHCCCCCCcceEEEecCCCC
Confidence 9999999999999887 5999999998643
No 171
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=96.42 E-value=0.025 Score=55.63 Aligned_cols=97 Identities=14% Similarity=0.235 Sum_probs=65.9
Q ss_pred CeEEEECCCCCChHH--HHHHHHHHHhC-CCEEEEEcCCCCC--CCCCCCCCCCHHHHHHHHHHHHHHhC--CCCEEEEE
Q 007536 428 PAILLVHGFGAFLEH--YRDNIYDIADG-GNRVWAITLLGFG--RSEKPNIVYTELMWSELLRDFTVEVV--GEPVHLIG 500 (599)
Q Consensus 428 p~vlllHG~~~~~~~--w~~~~~~l~~~-g~~vi~~D~~G~G--~S~~~~~~~~~~~~~~~l~~~l~~l~--~~~~~lvG 500 (599)
-|+|++||++.+... ...+.+.+.+. |..|++.|. |-| .|. -..+.++++.+.+.+.... .+-++++|
T Consensus 24 ~P~ii~HGigd~c~~~~~~~~~q~l~~~~g~~v~~lei-g~g~~~s~----l~pl~~Qv~~~ce~v~~m~~lsqGynivg 98 (296)
T KOG2541|consen 24 VPVIVWHGIGDSCSSLSMANLTQLLEELPGSPVYCLEI-GDGIKDSS----LMPLWEQVDVACEKVKQMPELSQGYNIVG 98 (296)
T ss_pred CCEEEEeccCcccccchHHHHHHHHHhCCCCeeEEEEe-cCCcchhh----hccHHHHHHHHHHHHhcchhccCceEEEE
Confidence 689999999987765 66666666554 788888875 333 221 1233444444444433222 25699999
Q ss_pred eChHHHHHHHHHHhCCc-ccceEEEEcCCC
Q 007536 501 NSIGGYFVAIVACLWPA-VVKSVVLINSAG 529 (599)
Q Consensus 501 hS~Gg~ia~~~a~~~p~-~v~~lvli~~~~ 529 (599)
.|.||.++-.++..-++ .|..+|.++++.
T Consensus 99 ~SQGglv~Raliq~cd~ppV~n~ISL~gPh 128 (296)
T KOG2541|consen 99 YSQGGLVARALIQFCDNPPVKNFISLGGPH 128 (296)
T ss_pred EccccHHHHHHHHhCCCCCcceeEeccCCc
Confidence 99999999988887543 599999998863
No 172
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=96.32 E-value=0.0059 Score=65.14 Aligned_cols=104 Identities=18% Similarity=0.172 Sum_probs=68.5
Q ss_pred CCeEEEECCCC---CChHHHHHHHHHHHhCC-CEEEEEcCC-C-CCCCC--------CCCCCCCHHH---HHHHHHHHHH
Q 007536 427 GPAILLVHGFG---AFLEHYRDNIYDIADGG-NRVWAITLL-G-FGRSE--------KPNIVYTELM---WSELLRDFTV 489 (599)
Q Consensus 427 ~p~vlllHG~~---~~~~~w~~~~~~l~~~g-~~vi~~D~~-G-~G~S~--------~~~~~~~~~~---~~~~l~~~l~ 489 (599)
.|++|+|||.+ ++...-..--..|+++| +-|+.+++| | +|.=+ .......+.+ ..+++.+-|+
T Consensus 94 ~PVmV~IHGG~y~~Gs~s~~~ydgs~La~~g~vVvVSvNYRLG~lGfL~~~~~~~~~~~~~n~Gl~DqilALkWV~~NIe 173 (491)
T COG2272 94 LPVMVYIHGGGYIMGSGSEPLYDGSALAARGDVVVVSVNYRLGALGFLDLSSLDTEDAFASNLGLLDQILALKWVRDNIE 173 (491)
T ss_pred CcEEEEEeccccccCCCcccccChHHHHhcCCEEEEEeCcccccceeeehhhccccccccccccHHHHHHHHHHHHHHHH
Confidence 58999999973 33333222245777777 888888887 1 22211 1111223333 3557778888
Q ss_pred HhCC--CCEEEEEeChHHHHHHHHHHh--CCcccceEEEEcCCCC
Q 007536 490 EVVG--EPVHLIGNSIGGYFVAIVACL--WPAVVKSVVLINSAGN 530 (599)
Q Consensus 490 ~l~~--~~~~lvGhS~Gg~ia~~~a~~--~p~~v~~lvli~~~~~ 530 (599)
+.+. +.|.|+|+|.||+.++.+.+- ....+.++|+.++...
T Consensus 174 ~FGGDp~NVTl~GeSAGa~si~~Lla~P~AkGLF~rAi~~Sg~~~ 218 (491)
T COG2272 174 AFGGDPQNVTLFGESAGAASILTLLAVPSAKGLFHRAIALSGAAS 218 (491)
T ss_pred HhCCCccceEEeeccchHHHHHHhhcCccchHHHHHHHHhCCCCC
Confidence 9987 469999999999998877653 2246888888888754
No 173
>COG0627 Predicted esterase [General function prediction only]
Probab=96.25 E-value=0.01 Score=61.11 Aligned_cols=38 Identities=24% Similarity=0.218 Sum_probs=33.8
Q ss_pred CEEEEEeChHHHHHHHHHHhCCcccceEEEEcCCCCCC
Q 007536 495 PVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVI 532 (599)
Q Consensus 495 ~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~~~~~ 532 (599)
.-.|+||||||.=|+.+|++||+++..+...++...+.
T Consensus 153 ~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~~~~s 190 (316)
T COG0627 153 GRAIAGHSMGGYGALKLALKHPDRFKSASSFSGILSPS 190 (316)
T ss_pred CceeEEEeccchhhhhhhhhCcchhceecccccccccc
Confidence 78899999999999999999999999999888865443
No 174
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.21 E-value=0.011 Score=54.15 Aligned_cols=39 Identities=15% Similarity=0.227 Sum_probs=31.9
Q ss_pred CCCCEEEEEeChHHHHHHHHHHhCCc----ccceEEEEcCCCC
Q 007536 492 VGEPVHLIGNSIGGYFVAIVACLWPA----VVKSVVLINSAGN 530 (599)
Q Consensus 492 ~~~~~~lvGhS~Gg~ia~~~a~~~p~----~v~~lvli~~~~~ 530 (599)
...+++++|||+||.+|..++..... .+..++..+++..
T Consensus 26 p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p~~ 68 (153)
T cd00741 26 PDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPPRV 68 (153)
T ss_pred CCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCCcc
Confidence 56889999999999999998887654 5777888887644
No 175
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=96.20 E-value=0.0078 Score=66.99 Aligned_cols=103 Identities=21% Similarity=0.189 Sum_probs=62.3
Q ss_pred CCeEEEECCCC---CCh--HHHHHHHHHHHhCCCEEEEEcCC----CCCCCCCCC---CCCCHHHH---HHHHHHHHHHh
Q 007536 427 GPAILLVHGFG---AFL--EHYRDNIYDIADGGNRVWAITLL----GFGRSEKPN---IVYTELMW---SELLRDFTVEV 491 (599)
Q Consensus 427 ~p~vlllHG~~---~~~--~~w~~~~~~l~~~g~~vi~~D~~----G~G~S~~~~---~~~~~~~~---~~~l~~~l~~l 491 (599)
-|++|+|||.+ ++. ..+ .-...++..+.-||.+.+| ||-.+.... +.+.+.++ .++|.+-|...
T Consensus 125 lPV~v~ihGG~f~~G~~~~~~~-~~~~~~~~~~vivVt~nYRlg~~Gfl~~~~~~~~~gN~Gl~Dq~~AL~WV~~nI~~F 203 (535)
T PF00135_consen 125 LPVMVWIHGGGFMFGSGSFPPY-DGASLAASKDVIVVTINYRLGAFGFLSLGDLDAPSGNYGLLDQRLALKWVQDNIAAF 203 (535)
T ss_dssp EEEEEEE--STTTSSCTTSGGG-HTHHHHHHHTSEEEEE----HHHHH-BSSSTTSHBSTHHHHHHHHHHHHHHHHGGGG
T ss_pred cceEEEeecccccCCCcccccc-cccccccCCCEEEEEecccccccccccccccccCchhhhhhhhHHHHHHHHhhhhhc
Confidence 48899999974 233 223 2233445568999999998 543332211 34444443 44666667777
Q ss_pred CC--CCEEEEEeChHHHHHHHHHHhC--CcccceEEEEcCCCC
Q 007536 492 VG--EPVHLIGNSIGGYFVAIVACLW--PAVVKSVVLINSAGN 530 (599)
Q Consensus 492 ~~--~~~~lvGhS~Gg~ia~~~a~~~--p~~v~~lvli~~~~~ 530 (599)
++ ++|.|.|||.||..+..+...- ...++++|+.++...
T Consensus 204 GGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SGs~~ 246 (535)
T PF00135_consen 204 GGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSGSAL 246 (535)
T ss_dssp TEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES--TT
T ss_pred ccCCcceeeeeecccccccceeeeccccccccccccccccccc
Confidence 76 5799999999999988776652 257999999998543
No 176
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=96.07 E-value=0.044 Score=57.39 Aligned_cols=105 Identities=19% Similarity=0.223 Sum_probs=66.5
Q ss_pred CCeEEEECCCCCChHHHHHH------HHHHHhCCCEEEEEcCCCCCCCC-CCCCCCCHHHHHHHHHHHHHHhCCCCEEEE
Q 007536 427 GPAILLVHGFGAFLEHYRDN------IYDIADGGNRVWAITLLGFGRSE-KPNIVYTELMWSELLRDFTVEVVGEPVHLI 499 (599)
Q Consensus 427 ~p~vlllHG~~~~~~~w~~~------~~~l~~~g~~vi~~D~~G~G~S~-~~~~~~~~~~~~~~l~~~l~~l~~~~~~lv 499 (599)
.|.||++||+|--......+ +..+.+ ...++++|+.-...-+ ...-+..+.+..+....+++..+.+.++|+
T Consensus 122 DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l~-~~SILvLDYsLt~~~~~~~~yPtQL~qlv~~Y~~Lv~~~G~~nI~Lm 200 (374)
T PF10340_consen 122 DPVLIYLHGGGYFLGTTPSQIEFLLNIYKLLP-EVSILVLDYSLTSSDEHGHKYPTQLRQLVATYDYLVESEGNKNIILM 200 (374)
T ss_pred CcEEEEEcCCeeEecCCHHHHHHHHHHHHHcC-CCeEEEEeccccccccCCCcCchHHHHHHHHHHHHHhccCCCeEEEE
Confidence 58899999986433222211 222223 4689999987443000 111233455556666666766777899999
Q ss_pred EeChHHHHHHHHHHh--CCc---ccceEEEEcCCCCCC
Q 007536 500 GNSIGGYFVAIVACL--WPA---VVKSVVLINSAGNVI 532 (599)
Q Consensus 500 GhS~Gg~ia~~~a~~--~p~---~v~~lvli~~~~~~~ 532 (599)
|-|.||.+++.+... +++ .-+++|+|+|-..+.
T Consensus 201 GDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l~ 238 (374)
T PF10340_consen 201 GDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNLV 238 (374)
T ss_pred ecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCCc
Confidence 999999999987653 211 247999999965544
No 177
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=96.06 E-value=0.01 Score=59.53 Aligned_cols=103 Identities=17% Similarity=0.103 Sum_probs=51.9
Q ss_pred CCeEEEECCCCCCh---HHHHHHHHHHHh--CCCEEEEEcCCCCCCC-CCCCC-CCCHHHHHHHHHHHHHHhC--CCCEE
Q 007536 427 GPAILLVHGFGAFL---EHYRDNIYDIAD--GGNRVWAITLLGFGRS-EKPNI-VYTELMWSELLRDFTVEVV--GEPVH 497 (599)
Q Consensus 427 ~p~vlllHG~~~~~---~~w~~~~~~l~~--~g~~vi~~D~~G~G~S-~~~~~-~~~~~~~~~~l~~~l~~l~--~~~~~ 497 (599)
..|||+.||+|.+. ..+..+.+.+.+ -|--|..++.- -|.+ +.... --.+..+.+.+.+.+.... .+-++
T Consensus 5 ~~PvViwHGmGD~~~~~~~m~~i~~~i~~~~PG~yV~si~ig-~~~~~D~~~s~f~~v~~Qv~~vc~~l~~~p~L~~G~~ 83 (279)
T PF02089_consen 5 PLPVVIWHGMGDSCCNPSSMGSIKELIEEQHPGTYVHSIEIG-NDPSEDVENSFFGNVNDQVEQVCEQLANDPELANGFN 83 (279)
T ss_dssp S--EEEE--TT--S--TTTHHHHHHHHHHHSTT--EEE--SS-SSHHHHHHHHHHSHHHHHHHHHHHHHHH-GGGTT-EE
T ss_pred CCcEEEEEcCccccCChhHHHHHHHHHHHhCCCceEEEEEEC-CCcchhhhhhHHHHHHHHHHHHHHHHhhChhhhccee
Confidence 45899999999753 234444333322 26667777652 2211 10000 1123334444444444322 15699
Q ss_pred EEEeChHHHHHHHHHHhCCc-ccceEEEEcCCCC
Q 007536 498 LIGNSIGGYFVAIVACLWPA-VVKSVVLINSAGN 530 (599)
Q Consensus 498 lvGhS~Gg~ia~~~a~~~p~-~v~~lvli~~~~~ 530 (599)
+||+|.||.++-.++.+.|+ .|+.+|.++++..
T Consensus 84 ~IGfSQGgl~lRa~vq~c~~~~V~nlISlggph~ 117 (279)
T PF02089_consen 84 AIGFSQGGLFLRAYVQRCNDPPVHNLISLGGPHM 117 (279)
T ss_dssp EEEETCHHHHHHHHHHH-TSS-EEEEEEES--TT
T ss_pred eeeeccccHHHHHHHHHCCCCCceeEEEecCccc
Confidence 99999999999999999874 6999999998643
No 178
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=95.88 E-value=0.045 Score=58.79 Aligned_cols=77 Identities=25% Similarity=0.319 Sum_probs=57.8
Q ss_pred HHHHHHhCCCEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC-----CCCEEEEEeChHHHHHHHHHHhCCcccc
Q 007536 446 NIYDIADGGNRVWAITLLGFGRSEKPNIVYTELMWSELLRDFTVEVV-----GEPVHLIGNSIGGYFVAIVACLWPAVVK 520 (599)
Q Consensus 446 ~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~-----~~~~~lvGhS~Gg~ia~~~a~~~p~~v~ 520 (599)
+-..|. .|+.|+.+... ..|....++.+......+|++.+. ..+++|||.+.||..++.+|+.+|+.+.
T Consensus 93 vG~AL~-~GHPvYFV~F~-----p~P~pgQTl~DV~~ae~~Fv~~V~~~hp~~~kp~liGnCQgGWa~~mlAA~~Pd~~g 166 (581)
T PF11339_consen 93 VGVALR-AGHPVYFVGFF-----PEPEPGQTLEDVMRAEAAFVEEVAERHPDAPKPNLIGNCQGGWAAMMLAALRPDLVG 166 (581)
T ss_pred HHHHHH-cCCCeEEEEec-----CCCCCCCcHHHHHHHHHHHHHHHHHhCCCCCCceEEeccHHHHHHHHHHhcCcCccC
Confidence 334454 58999988654 223345588887777777766543 2489999999999999999999999988
Q ss_pred eEEEEcCC
Q 007536 521 SVVLINSA 528 (599)
Q Consensus 521 ~lvli~~~ 528 (599)
-+|+-+++
T Consensus 167 plvlaGaP 174 (581)
T PF11339_consen 167 PLVLAGAP 174 (581)
T ss_pred ceeecCCC
Confidence 88887765
No 179
>KOG3101 consensus Esterase D [General function prediction only]
Probab=95.86 E-value=0.0032 Score=59.42 Aligned_cols=106 Identities=20% Similarity=0.194 Sum_probs=68.6
Q ss_pred CCeEEEECCCCCChHHHHH---HHHHHHhCCCEEEEEcCCCCCC-----CCC---C--CC---CCCHHHHHH------H-
Q 007536 427 GPAILLVHGFGAFLEHYRD---NIYDIADGGNRVWAITLLGFGR-----SEK---P--NI---VYTELMWSE------L- 483 (599)
Q Consensus 427 ~p~vlllHG~~~~~~~w~~---~~~~l~~~g~~vi~~D~~G~G~-----S~~---~--~~---~~~~~~~~~------~- 483 (599)
-|++.++.|+..+.+.+.. +-....++|+.|+++|-.-.|. ++. . .+ ..+.+-|+. .
T Consensus 44 ~P~lf~LSGLTCT~~Nfi~Ksg~qq~As~hgl~vV~PDTSPRG~~v~g~~eswDFG~GAGFYvnAt~epw~~~yrMYdYv 123 (283)
T KOG3101|consen 44 CPVLFYLSGLTCTHENFIEKSGFQQQASKHGLAVVAPDTSPRGVEVAGDDESWDFGQGAGFYVNATQEPWAKHYRMYDYV 123 (283)
T ss_pred CceEEEecCCcccchhhHhhhhHHHhHhhcCeEEECCCCCCCccccCCCcccccccCCceeEEecccchHhhhhhHHHHH
Confidence 4788899999988776642 3344556799999999753332 210 0 00 112222222 1
Q ss_pred HHHHHHHhC-------CCCEEEEEeChHHHHHHHHHHhCCcccceEEEEcCCCCCC
Q 007536 484 LRDFTVEVV-------GEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVI 532 (599)
Q Consensus 484 l~~~l~~l~-------~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~~~~~ 532 (599)
+.++.+.+. ..++.|.||||||.=|+..+.+.|.+.+++-..+|...+.
T Consensus 124 ~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFAPI~NP~ 179 (283)
T KOG3101|consen 124 VKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSAFAPICNPI 179 (283)
T ss_pred HHHHHHHhccccccccchhcceeccccCCCceEEEEEcCcccccceeccccccCcc
Confidence 222222222 2468999999999999999999999999888888765544
No 180
>PF06441 EHN: Epoxide hydrolase N terminus; InterPro: IPR010497 This entry represents the N-terminal region of the eukaryotic epoxide hydrolase protein. Epoxide hydrolases (3.3.2.3 from EC) comprise a group of functionally related enzymes that catalyse the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarisation of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites, which arise during the biotransformation of foreign compounds []. This domain is often found in conjunction with IPR000073 from INTERPRO.; GO: 0004301 epoxide hydrolase activity, 0009636 response to toxin, 0016020 membrane; PDB: 3G0I_B 3G02_A 1QO7_A.
Probab=95.71 E-value=0.077 Score=45.95 Aligned_cols=70 Identities=16% Similarity=0.234 Sum_probs=39.5
Q ss_pred cccHHHHHHHHhhhh-hHHHHHHHhhhcccCCCCceeEEEEEECCEEEEEEEcCCC---CCeEEEECCCCCChHHHHHHH
Q 007536 372 GYSAATIAAAADAVC-SMEWYWLMSLRSLRSNEGVYSTRIWRWNGYQIQYTVAGKE---GPAILLVHGFGAFLEHYRDNI 447 (599)
Q Consensus 372 ~~s~~~va~a~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~y~~~g~~---~p~vlllHG~~~~~~~w~~~~ 447 (599)
|....++....+-+. ..+|....... + .++.-..+++|..||+.+..+. ..||||+||+++|-..|.+++
T Consensus 39 G~~~~~l~~L~~yW~~~fDWr~~E~~l----N--~~phf~t~I~g~~iHFih~rs~~~~aiPLll~HGWPgSf~Ef~~vI 112 (112)
T PF06441_consen 39 GTPLDWLKELVDYWRNEFDWRKHEARL----N--SFPHFKTEIDGLDIHFIHVRSKRPNAIPLLLLHGWPGSFLEFLKVI 112 (112)
T ss_dssp SS-HHHHHHHHHHHHHT--HHHHHHHH----T--TS-EEEEEETTEEEEEEEE--S-TT-EEEEEE--SS--GGGGHHHH
T ss_pred CCCHHHHHHHHHHHhhcCChHHHHHHH----H--cCCCeeEEEeeEEEEEEEeeCCCCCCeEEEEECCCCccHHhHHhhC
Confidence 345555555555443 55666554443 1 3555677889999999876433 568999999999988877653
No 181
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=95.62 E-value=0.013 Score=62.14 Aligned_cols=89 Identities=18% Similarity=0.034 Sum_probs=60.7
Q ss_pred HHHHHHHHHHHhCCCE------EEEEcCCCCCCCCCCC--CCCCHHHHHHHHHHHHHHhCCCCEEEEEeChHHHHHHHHH
Q 007536 441 EHYRDNIYDIADGGNR------VWAITLLGFGRSEKPN--IVYTELMWSELLRDFTVEVVGEPVHLIGNSIGGYFVAIVA 512 (599)
Q Consensus 441 ~~w~~~~~~l~~~g~~------vi~~D~~G~G~S~~~~--~~~~~~~~~~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a 512 (599)
..|..+++.|+.-||. -..+|+| .|-... .+..+..+...++.....-+.++++||+|||||.+.+.+.
T Consensus 124 ~~w~~~i~~lv~~GYe~~~~l~ga~YDwR---ls~~~~e~rd~yl~kLK~~iE~~~~~~G~kkVvlisHSMG~l~~lyFl 200 (473)
T KOG2369|consen 124 WYWHELIENLVGIGYERGKTLFGAPYDWR---LSYHNSEERDQYLSKLKKKIETMYKLNGGKKVVLISHSMGGLYVLYFL 200 (473)
T ss_pred HHHHHHHHHHHhhCcccCceeeccccchh---hccCChhHHHHHHHHHHHHHHHHHHHcCCCceEEEecCCccHHHHHHH
Confidence 5899999999988876 3445666 221111 1223445555555555555569999999999999999999
Q ss_pred HhCCc--------ccceEEEEcCCCCCC
Q 007536 513 CLWPA--------VVKSVVLINSAGNVI 532 (599)
Q Consensus 513 ~~~p~--------~v~~lvli~~~~~~~ 532 (599)
..+++ .|+++|-++++-...
T Consensus 201 ~w~~~~~~~W~~k~I~sfvnig~p~lG~ 228 (473)
T KOG2369|consen 201 KWVEAEGPAWCDKYIKSFVNIGAPWLGS 228 (473)
T ss_pred hcccccchhHHHHHHHHHHccCchhcCC
Confidence 88876 367777777654433
No 182
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=95.51 E-value=0.029 Score=61.53 Aligned_cols=89 Identities=13% Similarity=0.028 Sum_probs=57.1
Q ss_pred HHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCC--CCCHHHHHHHHHHHHH----HhCCCCEEEEEeChHHHHHHHHHHhC
Q 007536 442 HYRDNIYDIADGGNRVWAITLLGFGRSEKPNI--VYTELMWSELLRDFTV----EVVGEPVHLIGNSIGGYFVAIVACLW 515 (599)
Q Consensus 442 ~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~--~~~~~~~~~~l~~~l~----~l~~~~~~lvGhS~Gg~ia~~~a~~~ 515 (599)
.|..+++.|+..||. --|+.|..+-..-.. ....+.+-..+..+++ .-+.++++||||||||.+++.+...-
T Consensus 157 vw~kLIe~L~~iGY~--~~nL~gAPYDWRls~~~le~rd~YF~rLK~lIE~ay~~nggkKVVLV~HSMGglv~lyFL~wv 234 (642)
T PLN02517 157 VWAVLIANLARIGYE--EKNMYMAAYDWRLSFQNTEVRDQTLSRLKSNIELMVATNGGKKVVVVPHSMGVLYFLHFMKWV 234 (642)
T ss_pred eHHHHHHHHHHcCCC--CCceeecccccccCccchhhhhHHHHHHHHHHHHHHHHcCCCeEEEEEeCCchHHHHHHHHhc
Confidence 689999999999986 456665554332110 1111233333444444 22358999999999999999876531
Q ss_pred -----------C----cccceEEEEcCCCCCC
Q 007536 516 -----------P----AVVKSVVLINSAGNVI 532 (599)
Q Consensus 516 -----------p----~~v~~lvli~~~~~~~ 532 (599)
+ ..|+++|.|+++....
T Consensus 235 ~~~~~~gG~gG~~W~dKyI~s~I~Iagp~lGs 266 (642)
T PLN02517 235 EAPAPMGGGGGPGWCAKHIKAVMNIGGPFLGV 266 (642)
T ss_pred cccccccCCcchHHHHHHHHHheecccccCCc
Confidence 1 2489999999874433
No 183
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=95.43 E-value=0.077 Score=55.31 Aligned_cols=99 Identities=16% Similarity=0.138 Sum_probs=70.2
Q ss_pred CCeEEEECCCCCChHHHH-------HHHHHHHhCCCEEEEEcCCCCCCCCCCC----------CCCCHHHHHHHHHHHHH
Q 007536 427 GPAILLVHGFGAFLEHYR-------DNIYDIADGGNRVWAITLLGFGRSEKPN----------IVYTELMWSELLRDFTV 489 (599)
Q Consensus 427 ~p~vlllHG~~~~~~~w~-------~~~~~l~~~g~~vi~~D~~G~G~S~~~~----------~~~~~~~~~~~l~~~l~ 489 (599)
+.||+|--|.-++-+.+. .+++.+ +--+|...+|-+|+|-+-. +-.+.++..+|...++.
T Consensus 80 ~gPIffYtGNEGdie~Fa~ntGFm~D~Ap~~---~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~ 156 (492)
T KOG2183|consen 80 EGPIFFYTGNEGDIEWFANNTGFMWDLAPEL---KALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLT 156 (492)
T ss_pred CCceEEEeCCcccHHHHHhccchHHhhhHhh---CceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHHH
Confidence 367888888877765544 334444 4558999999999996421 12344444445555555
Q ss_pred HhC------CCCEEEEEeChHHHHHHHHHHhCCcccceEEEEcCC
Q 007536 490 EVV------GEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSA 528 (599)
Q Consensus 490 ~l~------~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~ 528 (599)
.+. ..+|+.+|-|.||++|..+=.+||+.|.|...-+++
T Consensus 157 ~lK~~~~a~~~pvIafGGSYGGMLaAWfRlKYPHiv~GAlAaSAP 201 (492)
T KOG2183|consen 157 FLKRDLSAEASPVIAFGGSYGGMLAAWFRLKYPHIVLGALAASAP 201 (492)
T ss_pred HHhhccccccCcEEEecCchhhHHHHHHHhcChhhhhhhhhccCc
Confidence 443 268999999999999999999999999888776665
No 184
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=95.41 E-value=0.03 Score=50.22 Aligned_cols=36 Identities=17% Similarity=0.319 Sum_probs=27.2
Q ss_pred HHHHHHHHHHHHhCCCCEEEEEeChHHHHHHHHHHh
Q 007536 479 MWSELLRDFTVEVVGEPVHLIGNSIGGYFVAIVACL 514 (599)
Q Consensus 479 ~~~~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~ 514 (599)
...+.+..+++.....++++.|||+||.+|..++..
T Consensus 49 ~~~~~l~~~~~~~~~~~i~itGHSLGGalA~l~a~~ 84 (140)
T PF01764_consen 49 QILDALKELVEKYPDYSIVITGHSLGGALASLAAAD 84 (140)
T ss_dssp HHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcccCccchhhccchHHHHHHHHHHh
Confidence 344555555555555789999999999999988875
No 185
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=95.37 E-value=0.069 Score=54.69 Aligned_cols=83 Identities=19% Similarity=0.065 Sum_probs=48.8
Q ss_pred HHHHHHHhCCCEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHH---HHhCC---CCEEEEEeChHHHHHHHHHHh----
Q 007536 445 DNIYDIADGGNRVWAITLLGFGRSEKPNIVYTELMWSELLRDFT---VEVVG---EPVHLIGNSIGGYFVAIVACL---- 514 (599)
Q Consensus 445 ~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l---~~l~~---~~~~lvGhS~Gg~ia~~~a~~---- 514 (599)
.++..+.++||.|+++|+.|.|.. .......-....+.+.+.. ...+. .++.++|||-||.-++..|..
T Consensus 17 ~~l~~~L~~GyaVv~pDY~Glg~~-y~~~~~~a~avLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~Aa~~AA~l~~~Y 95 (290)
T PF03583_consen 17 PFLAAWLARGYAVVAPDYEGLGTP-YLNGRSEAYAVLDAVRAARNLPPKLGLSPSSRVALWGYSQGGQAALWAAELAPSY 95 (290)
T ss_pred HHHHHHHHCCCEEEecCCCCCCCc-ccCcHhHHHHHHHHHHHHHhcccccCCCCCCCEEEEeeCccHHHHHHHHHHhHHh
Confidence 346666778999999999999972 1111111111222222222 22222 579999999999988766543
Q ss_pred CCcc---cceEEEEcCC
Q 007536 515 WPAV---VKSVVLINSA 528 (599)
Q Consensus 515 ~p~~---v~~lvli~~~ 528 (599)
-||. +.|.++.+++
T Consensus 96 ApeL~~~l~Gaa~gg~~ 112 (290)
T PF03583_consen 96 APELNRDLVGAAAGGPP 112 (290)
T ss_pred CcccccceeEEeccCCc
Confidence 2443 5566655543
No 186
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=95.35 E-value=0.12 Score=49.02 Aligned_cols=102 Identities=20% Similarity=0.310 Sum_probs=64.2
Q ss_pred CCeEEEECCCCCC-hHHHH---------------HHHHHHHhCCCEEEEEcCCC---CCCCCCCCCCC--CHHHHHH-HH
Q 007536 427 GPAILLVHGFGAF-LEHYR---------------DNIYDIADGGNRVWAITLLG---FGRSEKPNIVY--TELMWSE-LL 484 (599)
Q Consensus 427 ~p~vlllHG~~~~-~~~w~---------------~~~~~l~~~g~~vi~~D~~G---~G~S~~~~~~~--~~~~~~~-~l 484 (599)
...+|||||-|-- ...|. ++++...+.||.|+..+.-- +-.+...+..| +....+. ..
T Consensus 101 ~kLlVLIHGSGvVrAGQWARrLIIN~~Ld~GTQiPyi~rAv~~Gygviv~N~N~~~kfye~k~np~kyirt~veh~~yvw 180 (297)
T KOG3967|consen 101 QKLLVLIHGSGVVRAGQWARRLIINEDLDSGTQIPYIKRAVAEGYGVIVLNPNRERKFYEKKRNPQKYIRTPVEHAKYVW 180 (297)
T ss_pred cceEEEEecCceEecchHhhhhhhccccccCCcChHHHHHHHcCCcEEEeCCchhhhhhhcccCcchhccchHHHHHHHH
Confidence 4578999998743 23443 33555556799999987541 21121111111 2222222 22
Q ss_pred HHHHHHhCCCCEEEEEeChHHHHHHHHHHhCC--cccceEEEEcCC
Q 007536 485 RDFTVEVVGEPVHLIGNSIGGYFVAIVACLWP--AVVKSVVLINSA 528 (599)
Q Consensus 485 ~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p--~~v~~lvli~~~ 528 (599)
..++.-...+.++++.||.||...+.+..+.| ++|.++.+.+++
T Consensus 181 ~~~v~pa~~~sv~vvahsyGG~~t~~l~~~f~~d~~v~aialTDs~ 226 (297)
T KOG3967|consen 181 KNIVLPAKAESVFVVAHSYGGSLTLDLVERFPDDESVFAIALTDSA 226 (297)
T ss_pred HHHhcccCcceEEEEEeccCChhHHHHHHhcCCccceEEEEeeccc
Confidence 33344445578999999999999999999988 468888888876
No 187
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=95.27 E-value=0.042 Score=53.89 Aligned_cols=50 Identities=16% Similarity=0.210 Sum_probs=38.3
Q ss_pred HHHHHHHHHHhCCCCEEEEEeChHHHHHHHHHHhC----CcccceEEEEcCCCCC
Q 007536 481 SELLRDFTVEVVGEPVHLIGNSIGGYFVAIVACLW----PAVVKSVVLINSAGNV 531 (599)
Q Consensus 481 ~~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~----p~~v~~lvli~~~~~~ 531 (599)
.+.+..+++... +++.+.|||.||.+|..+|... .++|.+++..++++..
T Consensus 72 ~~yl~~~~~~~~-~~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgPGf~ 125 (224)
T PF11187_consen 72 LAYLKKIAKKYP-GKIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGPGFS 125 (224)
T ss_pred HHHHHHHHHhCC-CCEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCCCCC
Confidence 444555555544 4599999999999999988873 3589999999998754
No 188
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=95.04 E-value=0.072 Score=51.21 Aligned_cols=118 Identities=11% Similarity=0.063 Sum_probs=71.1
Q ss_pred EEEECCEEEEEEEcCCCCCeEEEECCC-CCChHHHHHHHHHHHhCCCEEEEEcCC-CCCCCCC-CC-------CCCCHHH
Q 007536 410 IWRWNGYQIQYTVAGKEGPAILLVHGF-GAFLEHYRDNIYDIADGGNRVWAITLL-GFGRSEK-PN-------IVYTELM 479 (599)
Q Consensus 410 ~~~~~g~~l~y~~~g~~~p~vlllHG~-~~~~~~w~~~~~~l~~~g~~vi~~D~~-G~G~S~~-~~-------~~~~~~~ 479 (599)
..+++|..-+..-....+..||++--. |-+-..-+..+..++.+||.|+.||+- |--.|.. .. ...+.+.
T Consensus 22 ~~~v~gldaYv~gs~~~~~~li~i~DvfG~~~~n~r~~Adk~A~~Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~~~~~~~~ 101 (242)
T KOG3043|consen 22 EEEVGGLDAYVVGSTSSKKVLIVIQDVFGFQFPNTREGADKVALNGYTVLVPDFFRGDPWSPSLQKSERPEWMKGHSPPK 101 (242)
T ss_pred eEeecCeeEEEecCCCCCeEEEEEEeeeccccHHHHHHHHHHhcCCcEEEcchhhcCCCCCCCCChhhhHHHHhcCCccc
Confidence 345556543332221123356666654 444445778899999999999999985 4111211 00 0112222
Q ss_pred HHHHHHHHHHHh---C-CCCEEEEEeChHHHHHHHHHHhCCcccceEEEEcCC
Q 007536 480 WSELLRDFTVEV---V-GEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSA 528 (599)
Q Consensus 480 ~~~~l~~~l~~l---~-~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~ 528 (599)
.-.++..+++.+ + ..++-++|.+|||.++..+....| .+.+.+..-|.
T Consensus 102 ~~~~i~~v~k~lk~~g~~kkIGv~GfCwGak~vv~~~~~~~-~f~a~v~~hps 153 (242)
T KOG3043|consen 102 IWKDITAVVKWLKNHGDSKKIGVVGFCWGAKVVVTLSAKDP-EFDAGVSFHPS 153 (242)
T ss_pred chhHHHHHHHHHHHcCCcceeeEEEEeecceEEEEeeccch-hheeeeEecCC
Confidence 223444444433 3 468999999999999999988887 67777777665
No 189
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=95.01 E-value=0.084 Score=50.49 Aligned_cols=97 Identities=14% Similarity=0.112 Sum_probs=72.4
Q ss_pred CCeEEEECCCCCCh---HHHHHHHHHHHhCCCEEEEEcCC----CCCCCCCCCCCCCHHHHHHHHHHHHHHhCC----CC
Q 007536 427 GPAILLVHGFGAFL---EHYRDNIYDIADGGNRVWAITLL----GFGRSEKPNIVYTELMWSELLRDFTVEVVG----EP 495 (599)
Q Consensus 427 ~p~vlllHG~~~~~---~~w~~~~~~l~~~g~~vi~~D~~----G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~----~~ 495 (599)
...||||-|++..- ..-..+..+|-+.+|..+-+-++ |+|. .++++-++++..++++++. ..
T Consensus 36 ~~~vvfiGGLgdgLl~~~y~~~L~~~lde~~wslVq~q~~Ssy~G~Gt-------~slk~D~edl~~l~~Hi~~~~fSt~ 108 (299)
T KOG4840|consen 36 SVKVVFIGGLGDGLLICLYTTMLNRYLDENSWSLVQPQLRSSYNGYGT-------FSLKDDVEDLKCLLEHIQLCGFSTD 108 (299)
T ss_pred EEEEEEEcccCCCccccccHHHHHHHHhhccceeeeeecccccccccc-------ccccccHHHHHHHHHHhhccCcccc
Confidence 56789999887643 33456778888889999998776 4443 3556667788888887654 58
Q ss_pred EEEEEeChHHHHHHHHHH--hCCcccceEEEEcCCCC
Q 007536 496 VHLIGNSIGGYFVAIVAC--LWPAVVKSVVLINSAGN 530 (599)
Q Consensus 496 ~~lvGhS~Gg~ia~~~a~--~~p~~v~~lvli~~~~~ 530 (599)
++|+|||-|+.=.+.+.. ..|..|++.|+.+|...
T Consensus 109 vVL~GhSTGcQdi~yYlTnt~~~r~iraaIlqApVSD 145 (299)
T KOG4840|consen 109 VVLVGHSTGCQDIMYYLTNTTKDRKIRAAILQAPVSD 145 (299)
T ss_pred eEEEecCccchHHHHHHHhccchHHHHHHHHhCccch
Confidence 999999999998888773 24667888888888644
No 190
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=94.61 E-value=0.19 Score=53.79 Aligned_cols=106 Identities=17% Similarity=0.157 Sum_probs=77.5
Q ss_pred CCCeEEEECCCCCChHHHH-----HHHHHHHhCCCEEEEEcCCCCCCCCCCCC-------CCCHHHHHHHHHHHHHHhCC
Q 007536 426 EGPAILLVHGFGAFLEHYR-----DNIYDIADGGNRVWAITLLGFGRSEKPNI-------VYTELMWSELLRDFTVEVVG 493 (599)
Q Consensus 426 ~~p~vlllHG~~~~~~~w~-----~~~~~l~~~g~~vi~~D~~G~G~S~~~~~-------~~~~~~~~~~l~~~l~~l~~ 493 (599)
++|.-|+|-|=|.-...|- .+.....+.|-.|+-+.+|=+|.|.+... ..+..+...|+..+|+++..
T Consensus 85 ~gPiFLmIGGEgp~~~~wv~~~~~~~~~~AkkfgA~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QALaDla~fI~~~n~ 164 (514)
T KOG2182|consen 85 GGPIFLMIGGEGPESDKWVGNENLTWLQWAKKFGATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQALADLAEFIKAMNA 164 (514)
T ss_pred CCceEEEEcCCCCCCCCccccCcchHHHHHHHhCCeeEEeeeeccccCCCCCCCcccchhhhhHHHHHHHHHHHHHHHHh
Confidence 4777888877554443342 22333344578899999999999854221 23556677788888887753
Q ss_pred -------CCEEEEEeChHHHHHHHHHHhCCcccceEEEEcCCCCC
Q 007536 494 -------EPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNV 531 (599)
Q Consensus 494 -------~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~~~~ 531 (599)
.+.+.+|-|.-|.++..+=..||+.|.|.|.-+++...
T Consensus 165 k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel~~GsvASSapv~A 209 (514)
T KOG2182|consen 165 KFNFSDDSKWITFGGSYSGSLSAWFREKYPELTVGSVASSAPVLA 209 (514)
T ss_pred hcCCCCCCCeEEECCCchhHHHHHHHHhCchhheeecccccceeE
Confidence 28999999999999999999999999999888876543
No 191
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=94.41 E-value=0.28 Score=51.73 Aligned_cols=36 Identities=31% Similarity=0.409 Sum_probs=31.2
Q ss_pred CEEEEEeChHHHHHHHHHHhCCcccceEEEEcCCCC
Q 007536 495 PVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGN 530 (599)
Q Consensus 495 ~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~~~ 530 (599)
|++++|+|.||.+|...|.-.|..+.+++=-++...
T Consensus 185 p~I~~G~s~G~yla~l~~k~aP~~~~~~iDns~~~~ 220 (403)
T PF11144_consen 185 PKIYIGSSHGGYLAHLCAKIAPWLFDGVIDNSSYAL 220 (403)
T ss_pred cEEEEecCcHHHHHHHHHhhCccceeEEEecCcccc
Confidence 899999999999999999999999999876665443
No 192
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=94.19 E-value=0.082 Score=52.48 Aligned_cols=37 Identities=30% Similarity=0.444 Sum_probs=34.4
Q ss_pred CCEEEEEeChHHHHHHHHHHhCCcccceEEEEcCCCC
Q 007536 494 EPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGN 530 (599)
Q Consensus 494 ~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~~~ 530 (599)
++-.|+|||+||.+++.....+|+.+...++++|+-.
T Consensus 137 ~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SPSlW 173 (264)
T COG2819 137 ERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISPSLW 173 (264)
T ss_pred ccceeeeecchhHHHHHHHhcCcchhceeeeecchhh
Confidence 6799999999999999999999999999999999744
No 193
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=93.96 E-value=0.11 Score=51.25 Aligned_cols=27 Identities=19% Similarity=0.288 Sum_probs=21.5
Q ss_pred HHHhCCCCEEEEEeChHHHHHHHHHHh
Q 007536 488 TVEVVGEPVHLIGNSIGGYFVAIVACL 514 (599)
Q Consensus 488 l~~l~~~~~~lvGhS~Gg~ia~~~a~~ 514 (599)
+++....++++.||||||.+|..++..
T Consensus 122 ~~~~p~~~i~vtGHSLGGaiA~l~a~~ 148 (229)
T cd00519 122 LKQYPDYKIIVTGHSLGGALASLLALD 148 (229)
T ss_pred HhhCCCceEEEEccCHHHHHHHHHHHH
Confidence 333345789999999999999988775
No 194
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=93.93 E-value=0.14 Score=50.01 Aligned_cols=39 Identities=26% Similarity=0.455 Sum_probs=32.5
Q ss_pred CCEEEEEeChHHHHHHHHHHhCCcccceEEEEcCCCCCCC
Q 007536 494 EPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIP 533 (599)
Q Consensus 494 ~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~~~~~~ 533 (599)
+++.|+|.|.||-+|+.+|+.+| .|+++|.++++.....
T Consensus 22 ~~Igi~G~SkGaelALllAs~~~-~i~avVa~~ps~~~~~ 60 (213)
T PF08840_consen 22 DKIGIIGISKGAELALLLASRFP-QISAVVAISPSSVVFQ 60 (213)
T ss_dssp SSEEEEEETHHHHHHHHHHHHSS-SEEEEEEES--SB--S
T ss_pred CCEEEEEECHHHHHHHHHHhcCC-CccEEEEeCCceeEec
Confidence 68999999999999999999999 7999999999866543
No 195
>PF04244 DPRP: Deoxyribodipyrimidine photo-lyase-related protein; InterPro: IPR007357 This family appears to be related to DNA photolyases.; PDB: 3ZXS_A.
Probab=93.90 E-value=0.52 Score=46.18 Aligned_cols=121 Identities=12% Similarity=0.108 Sum_probs=63.6
Q ss_pred EEEEcCCCCCCCCHHHHHHHhCCCeEEEEEeCCc-ccc--cCCHhHHHHHHHHHHHHHHHHHhcCCcEEEEEcC------
Q 007536 48 VIWFKQDLRVDDHLGLVAASKYQAVVPLYVFDHR-ILS--RYSNEMLELVIFALEDLRKSLKEQGSDLMIRFGR------ 118 (599)
Q Consensus 48 l~WfrrDLRl~DN~aL~~A~~~~~v~~vfi~d~~-~~~--~~~~~r~~Fl~~sL~~L~~~L~~~g~~L~v~~g~------ 118 (599)
|.|.=-|.=..++++|.. . . .-..|+..+.. ... .+...+..+++.+++.+.++|++.|..+..+.-+
T Consensus 1 L~lIlgdQL~~~~~~l~~-~-~-~~~~v~mvE~~~~~~~~~~HkqKl~l~~saMRhfa~~L~~~G~~V~Y~~~~~~~~~~ 77 (224)
T PF04244_consen 1 LRLILGDQLFEDHPALRD-D-P-ADDRVLMVEVPEEFTYVPHHKQKLVLFFSAMRHFADELRAKGFRVHYIELDDPENTQ 77 (224)
T ss_dssp EEE--TT---TT-HHHHT---T-TT-EEEEE--HHHHHSS---HHHHHHHHHHHHHHHHHHHHTT--EEEE-TT-TT--S
T ss_pred CeEeccCCCCCccccccc-C-C-CCCEEEEEEchHHhCcCcccHHHHHHHHHHHHHHHHHHHhCCCEEEEEeCCCccccc
Confidence 445556666677777766 2 2 12233333332 222 2466789999999999999999999998887633
Q ss_pred -HHHHHHHHHHHhCCcEEEEccccChhHHHHHHHHHHHHHhcccCCCCceeEeeCcccccC
Q 007536 119 -VENVIRELVEEVKATSVFAEEEVEYHLRQMMAIVDETLAKVSLVDGKPKICLWQTPFYDI 178 (599)
Q Consensus 119 -~~~~l~~l~~~~~~~~v~~~~~~~~~~~~~d~~v~~~l~~~gi~~~~~~~~~~~~~l~~~ 178 (599)
-.+.|.+++++++++.|.+.+. .+.+..+.+.+.+++.|| ++..+.+..++..
T Consensus 78 s~~~~L~~~~~~~~~~~~~~~~P---~d~~l~~~l~~~~~~~~i----~~~~~~~~~Fl~s 131 (224)
T PF04244_consen 78 SFEDALARALKQHGIDRLHVMEP---GDYRLEQRLESLAQQLGI----PLEVLEDPHFLTS 131 (224)
T ss_dssp SHHHHHHHHHHHH----EEEE-----S-HHHHHHHHH----SSS-----EEEE--TTSSS-
T ss_pred cHHHHHHHHHHHcCCCEEEEECC---CCHHHHHHHHhhhcccCC----ceEEeCCCCccCC
Confidence 3678888999999999977554 555666677777777775 7777776655544
No 196
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=93.67 E-value=0.42 Score=47.07 Aligned_cols=89 Identities=24% Similarity=0.270 Sum_probs=56.4
Q ss_pred EEEECCC--CCCh-HHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCCCHHHHHH--------HHHHHHHHhCC----C
Q 007536 430 ILLVHGF--GAFL-EHYRDNIYDIADGGNRVWAITLLGFGRSEKPNIVYTELMWSE--------LLRDFTVEVVG----E 494 (599)
Q Consensus 430 vlllHG~--~~~~-~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~--------~l~~~l~~l~~----~ 494 (599)
|-|+-|. |... -.|+.+.+.|+++||.|++.-+. . .++-...|. .+..+.+..+. -
T Consensus 20 ihFiGGaf~ga~P~itYr~lLe~La~~Gy~ViAtPy~-~--------tfDH~~~A~~~~~~f~~~~~~L~~~~~~~~~~l 90 (250)
T PF07082_consen 20 IHFIGGAFVGAAPQITYRYLLERLADRGYAVIATPYV-V--------TFDHQAIAREVWERFERCLRALQKRGGLDPAYL 90 (250)
T ss_pred EEEcCcceeccCcHHHHHHHHHHHHhCCcEEEEEecC-C--------CCcHHHHHHHHHHHHHHHHHHHHHhcCCCcccC
Confidence 4455553 3333 36788999999999999998553 0 122222222 22222222111 3
Q ss_pred CEEEEEeChHHHHHHHHHHhCCcccceEEEEcC
Q 007536 495 PVHLIGNSIGGYFVAIVACLWPAVVKSVVLINS 527 (599)
Q Consensus 495 ~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~ 527 (599)
+++=||||||+-+-+.+...++..-++-|+|+-
T Consensus 91 P~~~vGHSlGcklhlLi~s~~~~~r~gniliSF 123 (250)
T PF07082_consen 91 PVYGVGHSLGCKLHLLIGSLFDVERAGNILISF 123 (250)
T ss_pred CeeeeecccchHHHHHHhhhccCcccceEEEec
Confidence 678899999999998888777655677888875
No 197
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=93.43 E-value=0.33 Score=49.00 Aligned_cols=40 Identities=20% Similarity=0.204 Sum_probs=35.0
Q ss_pred CCEEEEEeChHHHHHHHHHHhCCcccceEEEEcCCCCCCC
Q 007536 494 EPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVIP 533 (599)
Q Consensus 494 ~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~~~~~~ 533 (599)
+.-+|.|.|+||.+++..+..||+++..++..++.....+
T Consensus 177 ~~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps~~~~~ 216 (299)
T COG2382 177 DGRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSGSFWWTP 216 (299)
T ss_pred CCcEEeccccccHHHHHHHhcCchhhceeeccCCccccCc
Confidence 4567999999999999999999999999999998755443
No 198
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=93.33 E-value=0.099 Score=54.63 Aligned_cols=84 Identities=15% Similarity=0.190 Sum_probs=51.6
Q ss_pred CCeEEEECCCCC-ChHHHHHHHHHHHhCCCEEEEEcCCCCC-CCC--CCCCCCCHHHHHHHHHHHHHHhCCCCEEEEEeC
Q 007536 427 GPAILLVHGFGA-FLEHYRDNIYDIADGGNRVWAITLLGFG-RSE--KPNIVYTELMWSELLRDFTVEVVGEPVHLIGNS 502 (599)
Q Consensus 427 ~p~vlllHG~~~-~~~~w~~~~~~l~~~g~~vi~~D~~G~G-~S~--~~~~~~~~~~~~~~l~~~l~~l~~~~~~lvGhS 502 (599)
+-.||++||+-+ +...|...+...... +.=..+..+|+- ... .....+--...++++.+.+....++++..+|||
T Consensus 80 ~HLvVlthGi~~~~~~~~~~~~~~~~kk-~p~~~iv~~g~~~~~~~T~~Gv~~lG~Rla~~~~e~~~~~si~kISfvghS 158 (405)
T KOG4372|consen 80 KHLVVLTHGLHGADMEYWKEKIEQMTKK-MPDKLIVVRGKMNNMCQTFDGVDVLGERLAEEVKETLYDYSIEKISFVGHS 158 (405)
T ss_pred ceEEEeccccccccHHHHHHHHHhhhcC-CCcceEeeeccccchhhccccceeeecccHHHHhhhhhccccceeeeeeee
Confidence 346899999877 778888888777764 221133333332 221 111111122345556666666667899999999
Q ss_pred hHHHHHHHH
Q 007536 503 IGGYFVAIV 511 (599)
Q Consensus 503 ~Gg~ia~~~ 511 (599)
+||.++..+
T Consensus 159 LGGLvar~A 167 (405)
T KOG4372|consen 159 LGGLVARYA 167 (405)
T ss_pred cCCeeeeEE
Confidence 999988543
No 199
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=93.31 E-value=0.23 Score=46.70 Aligned_cols=55 Identities=24% Similarity=0.233 Sum_probs=42.3
Q ss_pred HHHHHHHHHHHHHhC-----CCCEEEEEeChHHHHHHHHHHhCCcccceEEEEcCCCCCC
Q 007536 478 LMWSELLRDFTVEVV-----GEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNVI 532 (599)
Q Consensus 478 ~~~~~~l~~~l~~l~-----~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~~~~~ 532 (599)
+.-+..|..|++.+. ..++.++|||+|+.++-.++...+..+..+|++++++...
T Consensus 88 ~~ga~~L~~f~~gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~~GSPG~g~ 147 (177)
T PF06259_consen 88 RAGAPRLARFLDGLRATHGPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVLVGSPGMGV 147 (177)
T ss_pred HHHHHHHHHHHHHhhhhcCCCCCEEEEEecchhHHHHHHhhhCCCCcccEEEECCCCCCC
Confidence 344566777766553 2479999999999999888777677899999999876543
No 200
>PLN02162 triacylglycerol lipase
Probab=93.14 E-value=0.22 Score=53.41 Aligned_cols=35 Identities=26% Similarity=0.348 Sum_probs=26.9
Q ss_pred HHHHHHHHHHHHhCCCCEEEEEeChHHHHHHHHHH
Q 007536 479 MWSELLRDFTVEVVGEPVHLIGNSIGGYFVAIVAC 513 (599)
Q Consensus 479 ~~~~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~ 513 (599)
.+.+.+.+++.+....++++.|||+||++|..+|.
T Consensus 263 ~I~~~L~~lL~k~p~~kliVTGHSLGGALAtLaAa 297 (475)
T PLN02162 263 TIRQMLRDKLARNKNLKYILTGHSLGGALAALFPA 297 (475)
T ss_pred HHHHHHHHHHHhCCCceEEEEecChHHHHHHHHHH
Confidence 44555666666666678999999999999988765
No 201
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=92.90 E-value=0.51 Score=45.70 Aligned_cols=83 Identities=16% Similarity=0.057 Sum_probs=55.8
Q ss_pred CCeEEEECCCCCChHHHHHHHHHHHhCCCE-EEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCEEEEEeChHH
Q 007536 427 GPAILLVHGFGAFLEHYRDNIYDIADGGNR-VWAITLLGFGRSEKPNIVYTELMWSELLRDFTVEVVGEPVHLIGNSIGG 505 (599)
Q Consensus 427 ~p~vlllHG~~~~~~~w~~~~~~l~~~g~~-vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~lvGhS~Gg 505 (599)
...|||..|+|++...+.++.. ..++. ++++|++..-. +. + + -..+.+.|||+|||-
T Consensus 11 ~~LilfF~GWg~d~~~f~hL~~---~~~~D~l~~yDYr~l~~--------d~-----~----~--~~y~~i~lvAWSmGV 68 (213)
T PF04301_consen 11 KELILFFAGWGMDPSPFSHLIL---PENYDVLICYDYRDLDF--------DF-----D----L--SGYREIYLVAWSMGV 68 (213)
T ss_pred CeEEEEEecCCCChHHhhhccC---CCCccEEEEecCccccc--------cc-----c----c--ccCceEEEEEEeHHH
Confidence 4678999999999888766531 12343 45667763221 10 1 1 124789999999999
Q ss_pred HHHHHHHHhCCcccceEEEEcCCCCCCC
Q 007536 506 YFVAIVACLWPAVVKSVVLINSAGNVIP 533 (599)
Q Consensus 506 ~ia~~~a~~~p~~v~~lvli~~~~~~~~ 533 (599)
.+|..+.... .++..|.|++++.+..
T Consensus 69 w~A~~~l~~~--~~~~aiAINGT~~Pid 94 (213)
T PF04301_consen 69 WAANRVLQGI--PFKRAIAINGTPYPID 94 (213)
T ss_pred HHHHHHhccC--CcceeEEEECCCCCcC
Confidence 9998876554 3778888888766543
No 202
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=92.78 E-value=0.31 Score=50.87 Aligned_cols=84 Identities=19% Similarity=0.148 Sum_probs=61.0
Q ss_pred CeEEEECCCCCChHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHH----hCCCCEEEEEeCh
Q 007536 428 PAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNIVYTELMWSELLRDFTVE----VVGEPVHLIGNSI 503 (599)
Q Consensus 428 p~vlllHG~~~~~~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~----l~~~~~~lvGhS~ 503 (599)
..-||+.|=|+-...=+.+.+.|+++|+.|+.+|-.-|=.|. .+.+..++|+..+++. .+..++.|+|.|+
T Consensus 261 ~~av~~SGDGGWr~lDk~v~~~l~~~gvpVvGvdsLRYfW~~-----rtPe~~a~Dl~r~i~~y~~~w~~~~~~liGySf 335 (456)
T COG3946 261 TVAVFYSGDGGWRDLDKEVAEALQKQGVPVVGVDSLRYFWSE-----RTPEQIAADLSRLIRFYARRWGAKRVLLIGYSF 335 (456)
T ss_pred eEEEEEecCCchhhhhHHHHHHHHHCCCceeeeehhhhhhcc-----CCHHHHHHHHHHHHHHHHHhhCcceEEEEeecc
Confidence 345777777665555567789999999999999976555554 3556677777777654 5668999999999
Q ss_pred HHHHHHHHHHhCC
Q 007536 504 GGYFVAIVACLWP 516 (599)
Q Consensus 504 Gg~ia~~~a~~~p 516 (599)
|+-+.-....+-|
T Consensus 336 GADvlP~~~n~L~ 348 (456)
T COG3946 336 GADVLPFAYNRLP 348 (456)
T ss_pred cchhhHHHHHhCC
Confidence 9987655444433
No 203
>PLN00413 triacylglycerol lipase
Probab=92.55 E-value=0.31 Score=52.41 Aligned_cols=50 Identities=14% Similarity=0.187 Sum_probs=35.5
Q ss_pred HHHHHHHHHHHHhCCCCEEEEEeChHHHHHHHHHHh---C-----CcccceEEEEcCC
Q 007536 479 MWSELLRDFTVEVVGEPVHLIGNSIGGYFVAIVACL---W-----PAVVKSVVLINSA 528 (599)
Q Consensus 479 ~~~~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~---~-----p~~v~~lvli~~~ 528 (599)
.+.+.+.++++.....++++.|||+||++|..+|.. + ..++.++...+.+
T Consensus 269 ~i~~~Lk~ll~~~p~~kliVTGHSLGGALAtLaA~~L~~~~~~~~~~ri~~VYTFG~P 326 (479)
T PLN00413 269 TILRHLKEIFDQNPTSKFILSGHSLGGALAILFTAVLIMHDEEEMLERLEGVYTFGQP 326 (479)
T ss_pred HHHHHHHHHHHHCCCCeEEEEecCHHHHHHHHHHHHHHhccchhhccccceEEEeCCC
Confidence 455667777777777789999999999999988752 1 2244556666553
No 204
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=92.31 E-value=0.27 Score=45.21 Aligned_cols=111 Identities=16% Similarity=0.271 Sum_probs=69.3
Q ss_pred EEEEEEEcCCCCCeEEEECCCCCChHHHHHH--HHHHH---hCC-CEEEEEcCCCCCCCCC----CCCCCCHHHHHHHHH
Q 007536 416 YQIQYTVAGKEGPAILLVHGFGAFLEHYRDN--IYDIA---DGG-NRVWAITLLGFGRSEK----PNIVYTELMWSELLR 485 (599)
Q Consensus 416 ~~l~y~~~g~~~p~vlllHG~~~~~~~w~~~--~~~l~---~~g-~~vi~~D~~G~G~S~~----~~~~~~~~~~~~~l~ 485 (599)
..+.+...|-.+-+||+.+--++.-..+..+ +..|+ +.| ...++++ |-..-+. ....-..+.....-.
T Consensus 15 RdMel~ryGHaG~pVvvFpts~Grf~eyed~G~v~ala~fie~G~vQlft~~--gldsESf~a~h~~~adr~~rH~Ayer 92 (227)
T COG4947 15 RDMELNRYGHAGIPVVVFPTSGGRFNEYEDFGMVDALASFIEEGLVQLFTLS--GLDSESFLATHKNAADRAERHRAYER 92 (227)
T ss_pred chhhhhhccCCCCcEEEEecCCCcchhhhhcccHHHHHHHHhcCcEEEEEec--ccchHhHhhhcCCHHHHHHHHHHHHH
Confidence 4456666776677888888777776666543 44443 334 3444443 3322111 111112223333333
Q ss_pred HHHHHhCCCCEEEEEeChHHHHHHHHHHhCCcccceEEEEcCC
Q 007536 486 DFTVEVVGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSA 528 (599)
Q Consensus 486 ~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~ 528 (599)
-++++......++-|-||||..|..+..++|+...++|.+++.
T Consensus 93 Yv~eEalpgs~~~sgcsmGayhA~nfvfrhP~lftkvialSGv 135 (227)
T COG4947 93 YVIEEALPGSTIVSGCSMGAYHAANFVFRHPHLFTKVIALSGV 135 (227)
T ss_pred HHHHhhcCCCccccccchhhhhhhhhheeChhHhhhheeecce
Confidence 4455555567788999999999999999999999999999885
No 205
>PLN02209 serine carboxypeptidase
Probab=92.25 E-value=1.6 Score=47.41 Aligned_cols=123 Identities=16% Similarity=0.128 Sum_probs=75.2
Q ss_pred eEEEEEEC---CEEEEEEEcCC-----CCCeEEEECCCCCChHHHHHHHH----------------HHHh------CCCE
Q 007536 407 STRIWRWN---GYQIQYTVAGK-----EGPAILLVHGFGAFLEHYRDNIY----------------DIAD------GGNR 456 (599)
Q Consensus 407 ~~~~~~~~---g~~l~y~~~g~-----~~p~vlllHG~~~~~~~w~~~~~----------------~l~~------~g~~ 456 (599)
..-+++++ +..++|.-... +.|.|+++-|.+|.+..+-.+.+ .+.. +-.+
T Consensus 40 ~sGy~~v~~~~~~~lf~~f~es~~~~~~~Pl~lWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~an 119 (437)
T PLN02209 40 ETGYIGIGEEENVQFFYYFIKSDKNPQEDPLIIWLNGGPGCSCLSGLFFENGPLALKNKVYNGSVPSLVSTTYSWTKTAN 119 (437)
T ss_pred EEEEEEecCCCCeEEEEEEEecCCCCCCCCEEEEECCCCcHHHhhhHHHhcCCceeccCCCCCCcccceeCCCchhhcCc
Confidence 34567775 45677654321 26889999999888876643221 1111 1268
Q ss_pred EEEEcCC-CCCCCCCCC--CCCCHHHHHHHHHHHHHHh-------CCCCEEEEEeChHHHHHHHHHHh----C------C
Q 007536 457 VWAITLL-GFGRSEKPN--IVYTELMWSELLRDFTVEV-------VGEPVHLIGNSIGGYFVAIVACL----W------P 516 (599)
Q Consensus 457 vi~~D~~-G~G~S~~~~--~~~~~~~~~~~l~~~l~~l-------~~~~~~lvGhS~Gg~ia~~~a~~----~------p 516 (599)
++-+|.| |.|.|.... ...+.+..++++.+++... ...+++|.|.|.||..+-.+|.. . +
T Consensus 120 llfiDqPvGtGfSy~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~~~ 199 (437)
T PLN02209 120 IIFLDQPVGSGFSYSKTPIERTSDTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISKGNYICCNPP 199 (437)
T ss_pred EEEecCCCCCCccCCCCCCCccCCHHHHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHhhcccccCCc
Confidence 9999965 888885322 1122223345555554432 23689999999999877666643 1 1
Q ss_pred cccceEEEEcCCC
Q 007536 517 AVVKSVVLINSAG 529 (599)
Q Consensus 517 ~~v~~lvli~~~~ 529 (599)
-.++|+++.++..
T Consensus 200 inl~Gi~igng~t 212 (437)
T PLN02209 200 INLQGYVLGNPIT 212 (437)
T ss_pred eeeeeEEecCccc
Confidence 2578988888753
No 206
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=92.19 E-value=0.61 Score=49.06 Aligned_cols=109 Identities=15% Similarity=0.123 Sum_probs=82.3
Q ss_pred EEEEEcCCCCCeEEEECCCCCChHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCC---CCCHHHHHHHHHHHHHHhC--
Q 007536 418 IQYTVAGKEGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNI---VYTELMWSELLRDFTVEVV-- 492 (599)
Q Consensus 418 l~y~~~g~~~p~vlllHG~~~~~~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~---~~~~~~~~~~l~~~l~~l~-- 492 (599)
|...+.+-+.|+|+..-|++.+..-.+.-...|.+ -+-+.+.+|-||.|.+.+. ..++.+.+.|.+.++..+.
T Consensus 54 vtLlHk~~drPtV~~T~GY~~~~~p~r~Ept~Lld--~NQl~vEhRfF~~SrP~p~DW~~Lti~QAA~D~Hri~~A~K~i 131 (448)
T PF05576_consen 54 VTLLHKDFDRPTVLYTEGYNVSTSPRRSEPTQLLD--GNQLSVEHRFFGPSRPEPADWSYLTIWQAASDQHRIVQAFKPI 131 (448)
T ss_pred EEEEEcCCCCCeEEEecCcccccCccccchhHhhc--cceEEEEEeeccCCCCCCCCcccccHhHhhHHHHHHHHHHHhh
Confidence 44444455689999999998765433332333433 5688999999999986543 4678888888888877664
Q ss_pred -CCCEEEEEeChHHHHHHHHHHhCCcccceEEEEcCC
Q 007536 493 -GEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSA 528 (599)
Q Consensus 493 -~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~ 528 (599)
.++.+--|-|-||+.++.+=..||+-|.+.|.--++
T Consensus 132 Y~~kWISTG~SKGGmTa~y~rrFyP~DVD~tVaYVAP 168 (448)
T PF05576_consen 132 YPGKWISTGGSKGGMTAVYYRRFYPDDVDGTVAYVAP 168 (448)
T ss_pred ccCCceecCcCCCceeEEEEeeeCCCCCCeeeeeecc
Confidence 378999999999999999888899999998876554
No 207
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=91.95 E-value=0.6 Score=50.33 Aligned_cols=101 Identities=18% Similarity=0.057 Sum_probs=65.6
Q ss_pred CCeEEEECCCCCChHHHHHHHHH-------------------HHhCCCEEEEEcCC-CCCCCCC--CCCCCCHHHHHHHH
Q 007536 427 GPAILLVHGFGAFLEHYRDNIYD-------------------IADGGNRVWAITLL-GFGRSEK--PNIVYTELMWSELL 484 (599)
Q Consensus 427 ~p~vlllHG~~~~~~~w~~~~~~-------------------l~~~g~~vi~~D~~-G~G~S~~--~~~~~~~~~~~~~l 484 (599)
.|.++++.|++|.+..|-.+.+. +.. .-.+|-+|+| |.|.|.. ....-+.....+|+
T Consensus 101 rPvi~wlNGGPGcSS~~g~l~elGP~rI~~~~~P~~~~NP~SW~~-~adLvFiDqPvGTGfS~a~~~e~~~d~~~~~~D~ 179 (498)
T COG2939 101 RPVIFWLNGGPGCSSVTGLLGELGPKRIQSGTSPSYPDNPGSWLD-FADLVFIDQPVGTGFSRALGDEKKKDFEGAGKDV 179 (498)
T ss_pred CceEEEecCCCChHhhhhhhhhcCCeeeeCCCCCCCCCCcccccc-CCceEEEecCcccCcccccccccccchhccchhH
Confidence 68899999999999888655321 111 1468899955 8998874 22233333444444
Q ss_pred HHHHH-------HhCC--CCEEEEEeChHHHHHHHHHHhCCc---ccceEEEEcCC
Q 007536 485 RDFTV-------EVVG--EPVHLIGNSIGGYFVAIVACLWPA---VVKSVVLINSA 528 (599)
Q Consensus 485 ~~~l~-------~l~~--~~~~lvGhS~Gg~ia~~~a~~~p~---~v~~lvli~~~ 528 (599)
..+++ +... .+.+|+|-|.||.-+..+|..--+ ..+++|++++.
T Consensus 180 ~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~~~~~~nlssv 235 (498)
T COG2939 180 YSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDNIALNGNVNLSSV 235 (498)
T ss_pred HHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhccccCCceEeeee
Confidence 43332 2322 589999999999988888765333 46777776664
No 208
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=91.95 E-value=2.6 Score=45.74 Aligned_cols=123 Identities=15% Similarity=0.105 Sum_probs=73.9
Q ss_pred eeEEEEEEC---CEEEEEEEcCC-----CCCeEEEECCCCCChHHHHHHH---H-------------HHHh------CCC
Q 007536 406 YSTRIWRWN---GYQIQYTVAGK-----EGPAILLVHGFGAFLEHYRDNI---Y-------------DIAD------GGN 455 (599)
Q Consensus 406 ~~~~~~~~~---g~~l~y~~~g~-----~~p~vlllHG~~~~~~~w~~~~---~-------------~l~~------~g~ 455 (599)
...-+++++ +..++|.-... +.|.||++-|.+|.+..+-.+. + .+.. +-.
T Consensus 37 ~~sGy~~v~~~~~~~lfy~f~es~~~~~~~P~~lWlnGGPG~SS~~g~~~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~a 116 (433)
T PLN03016 37 LETGYIGIGEDENVQFFYYFIKSENNPKEDPLLIWLNGGPGCSCLGGIIFENGPVGLKFEVFNGSAPSLFSTTYSWTKMA 116 (433)
T ss_pred EEEEEEEecCCCCeEEEEEEEecCCCcccCCEEEEEcCCCcHHHHHHHHHhcCCceeeccccCCCCCceeeCCCchhhcC
Confidence 334577775 46677754322 2688999999988776432211 1 1111 126
Q ss_pred EEEEEcCC-CCCCCCCCCC-CCC-HHHHHHHHHHHHHH----h---CCCCEEEEEeChHHHHHHHHHHh----C------
Q 007536 456 RVWAITLL-GFGRSEKPNI-VYT-ELMWSELLRDFTVE----V---VGEPVHLIGNSIGGYFVAIVACL----W------ 515 (599)
Q Consensus 456 ~vi~~D~~-G~G~S~~~~~-~~~-~~~~~~~l~~~l~~----l---~~~~~~lvGhS~Gg~ia~~~a~~----~------ 515 (599)
+++.+|.| |.|.|..... .++ -...++++..++.. . ...+++|+|.|.||..+-.+|.. .
T Consensus 117 nllfiDqPvGtGfSy~~~~~~~~~d~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i~~~n~~~~~~ 196 (433)
T PLN03016 117 NIIFLDQPVGSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEP 196 (433)
T ss_pred cEEEecCCCCCCccCCCCCCCccCCHHHHHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHHHhhcccccCC
Confidence 89999965 9999864321 111 11222344444433 2 34789999999999877776653 1
Q ss_pred CcccceEEEEcCC
Q 007536 516 PAVVKSVVLINSA 528 (599)
Q Consensus 516 p~~v~~lvli~~~ 528 (599)
+-.++|+++-++.
T Consensus 197 ~inLkGi~iGNg~ 209 (433)
T PLN03016 197 PINLQGYMLGNPV 209 (433)
T ss_pred cccceeeEecCCC
Confidence 2257898888874
No 209
>PLN02454 triacylglycerol lipase
Probab=91.90 E-value=0.26 Score=52.24 Aligned_cols=32 Identities=19% Similarity=0.327 Sum_probs=23.0
Q ss_pred HHHHHHHHhCCCC--EEEEEeChHHHHHHHHHHh
Q 007536 483 LLRDFTVEVVGEP--VHLIGNSIGGYFVAIVACL 514 (599)
Q Consensus 483 ~l~~~l~~l~~~~--~~lvGhS~Gg~ia~~~a~~ 514 (599)
.|..+++.....+ +++.||||||++|..+|..
T Consensus 215 ~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~d 248 (414)
T PLN02454 215 KIKELLERYKDEKLSIVLTGHSLGASLATLAAFD 248 (414)
T ss_pred HHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHH
Confidence 3444444444444 9999999999999988854
No 210
>PLN02571 triacylglycerol lipase
Probab=91.46 E-value=0.28 Score=52.07 Aligned_cols=36 Identities=14% Similarity=0.182 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHHhCCC--CEEEEEeChHHHHHHHHHHh
Q 007536 479 MWSELLRDFTVEVVGE--PVHLIGNSIGGYFVAIVACL 514 (599)
Q Consensus 479 ~~~~~l~~~l~~l~~~--~~~lvGhS~Gg~ia~~~a~~ 514 (599)
++.+.|..+++....+ ++++.||||||++|...|..
T Consensus 209 qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 209 QVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHH
Confidence 3445556666555443 68999999999999988764
No 211
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=90.89 E-value=0.44 Score=45.03 Aligned_cols=53 Identities=17% Similarity=0.192 Sum_probs=39.1
Q ss_pred HHHHHHHHHHHHhCCCCEEEEEeChHHHHHHHHHHh------CCcccceEEEEcCCCCC
Q 007536 479 MWSELLRDFTVEVVGEPVHLIGNSIGGYFVAIVACL------WPAVVKSVVLINSAGNV 531 (599)
Q Consensus 479 ~~~~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~------~p~~v~~lvli~~~~~~ 531 (599)
.+.+.+.+....-...+++|+|+|.|+.++..++.. ..++|.++|+++-+...
T Consensus 66 ~~~~~i~~~~~~CP~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~~I~avvlfGdP~~~ 124 (179)
T PF01083_consen 66 NLVRLIEEYAARCPNTKIVLAGYSQGAMVVGDALSGDGLPPDVADRIAAVVLFGDPRRG 124 (179)
T ss_dssp HHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHTTSSHHHHHHEEEEEEES-TTTB
T ss_pred HHHHHHHHHHHhCCCCCEEEEecccccHHHHHHHHhccCChhhhhhEEEEEEecCCccc
Confidence 344455555555556789999999999999998877 23689999999887553
No 212
>PLN02408 phospholipase A1
Probab=90.37 E-value=0.43 Score=49.98 Aligned_cols=35 Identities=17% Similarity=0.228 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHhCCC--CEEEEEeChHHHHHHHHHHh
Q 007536 480 WSELLRDFTVEVVGE--PVHLIGNSIGGYFVAIVACL 514 (599)
Q Consensus 480 ~~~~l~~~l~~l~~~--~~~lvGhS~Gg~ia~~~a~~ 514 (599)
+.+.|..+++....+ ++++.|||+||++|..+|..
T Consensus 184 Vl~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~d 220 (365)
T PLN02408 184 VREEIARLLQSYGDEPLSLTITGHSLGAALATLTAYD 220 (365)
T ss_pred HHHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHH
Confidence 344555556555543 59999999999999988765
No 213
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=89.86 E-value=0.57 Score=35.99 Aligned_cols=36 Identities=25% Similarity=0.458 Sum_probs=20.5
Q ss_pred EEEEEECCEEEEEEEc--CC-------CCCeEEEECCCCCChHHH
Q 007536 408 TRIWRWNGYQIQYTVA--GK-------EGPAILLVHGFGAFLEHY 443 (599)
Q Consensus 408 ~~~~~~~g~~l~y~~~--g~-------~~p~vlllHG~~~~~~~w 443 (599)
....+-||+-|..... +. .+|+|+|.||+.+++..|
T Consensus 15 h~V~T~DGYiL~l~RIp~~~~~~~~~~~k~pVll~HGL~~ss~~w 59 (63)
T PF04083_consen 15 HEVTTEDGYILTLHRIPPGKNSSNQNKKKPPVLLQHGLLQSSDDW 59 (63)
T ss_dssp EEEE-TTSEEEEEEEE-SBTTCTTTTTT--EEEEE--TT--GGGG
T ss_pred EEEEeCCCcEEEEEEccCCCCCcccCCCCCcEEEECCcccChHHH
Confidence 4456678887776542 11 268999999999999988
No 214
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=89.60 E-value=0.69 Score=44.53 Aligned_cols=68 Identities=10% Similarity=-0.057 Sum_probs=44.3
Q ss_pred HHHHHhCCCEEEEEcCCCCCCCCC-----CC----CCCCHHHHHHHHHHHHHHhCC-CCEEEEEeChHHHHHHHHHHhC
Q 007536 447 IYDIADGGNRVWAITLLGFGRSEK-----PN----IVYTELMWSELLRDFTVEVVG-EPVHLIGNSIGGYFVAIVACLW 515 (599)
Q Consensus 447 ~~~l~~~g~~vi~~D~~G~G~S~~-----~~----~~~~~~~~~~~l~~~l~~l~~-~~~~lvGhS~Gg~ia~~~a~~~ 515 (599)
+..+... .+|++|=+|-...... .. ......+..+....+|+..+. .+++|+|||.|+.+...+..++
T Consensus 39 as~F~~~-~~vfAP~YRQatl~~~~~~~~~~~~~a~~~ay~DV~~AF~~yL~~~n~GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 39 ASAFNGV-CNVFAPRYRQATLYAFLDTDREDAEKAFDLAYSDVRAAFDYYLANYNNGRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred hhhhhcC-CccccChhhcchhhhhhccCcchhHHHHHhhHHHHHHHHHHHHHhcCCCCCEEEEEeChHHHHHHHHHHHH
Confidence 3344443 7888887773322111 11 123344556666677777755 6899999999999999998764
No 215
>PLN02934 triacylglycerol lipase
Probab=89.19 E-value=0.54 Score=50.96 Aligned_cols=35 Identities=17% Similarity=0.264 Sum_probs=28.1
Q ss_pred HHHHHHHHHHHHhCCCCEEEEEeChHHHHHHHHHH
Q 007536 479 MWSELLRDFTVEVVGEPVHLIGNSIGGYFVAIVAC 513 (599)
Q Consensus 479 ~~~~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~ 513 (599)
.....+.+++++....++++.|||+||++|..+|.
T Consensus 306 ~v~~~lk~ll~~~p~~kIvVTGHSLGGALAtLaA~ 340 (515)
T PLN02934 306 AVRSKLKSLLKEHKNAKFVVTGHSLGGALAILFPT 340 (515)
T ss_pred HHHHHHHHHHHHCCCCeEEEeccccHHHHHHHHHH
Confidence 35556667777766679999999999999998874
No 216
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=88.96 E-value=2.1 Score=46.42 Aligned_cols=126 Identities=15% Similarity=0.027 Sum_probs=79.2
Q ss_pred CceeEEEEEEC---CEEEEEEEcCC----C-CCeEEEECCCCCChHHHHHHHHHHH------------h------CCCEE
Q 007536 404 GVYSTRIWRWN---GYQIQYTVAGK----E-GPAILLVHGFGAFLEHYRDNIYDIA------------D------GGNRV 457 (599)
Q Consensus 404 ~~~~~~~~~~~---g~~l~y~~~g~----~-~p~vlllHG~~~~~~~w~~~~~~l~------------~------~g~~v 457 (599)
.....-+++++ +..++|.-... + .|.||+|.|++|.+..- ....++. . .--++
T Consensus 42 f~~ysGYv~v~~~~~~~LFYwf~eS~~~P~~dPlvLWLnGGPGCSSl~-G~~~E~GPf~v~~~G~tL~~N~ySWnk~aNi 120 (454)
T KOG1282|consen 42 FKQYSGYVTVNESEGRQLFYWFFESENNPETDPLVLWLNGGPGCSSLG-GLFEENGPFRVKYNGKTLYLNPYSWNKEANI 120 (454)
T ss_pred cccccceEECCCCCCceEEEEEEEccCCCCCCCEEEEeCCCCCccchh-hhhhhcCCeEEcCCCCcceeCCccccccccE
Confidence 34444688887 78899864322 2 68899999998766443 2222111 0 11478
Q ss_pred EEEcCC-CCCCCCCCCC---CCCHHHHHHHHHHHHHHh-------CCCCEEEEEeChHHHHHHHHHHh----C------C
Q 007536 458 WAITLL-GFGRSEKPNI---VYTELMWSELLRDFTVEV-------VGEPVHLIGNSIGGYFVAIVACL----W------P 516 (599)
Q Consensus 458 i~~D~~-G~G~S~~~~~---~~~~~~~~~~l~~~l~~l-------~~~~~~lvGhS~Gg~ia~~~a~~----~------p 516 (599)
+-+|.| |.|.|-.... ..+.+..++++..+|... ...+++|.|-|.+|...-++|.. . +
T Consensus 121 LfLd~PvGvGFSYs~~~~~~~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I~~~N~~~~~~~ 200 (454)
T KOG1282|consen 121 LFLDQPVGVGFSYSNTSSDYKTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQEILKGNKKCCKPN 200 (454)
T ss_pred EEEecCCcCCccccCCCCcCcCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHHHHhccccccCCc
Confidence 899998 7777753221 224445556655555432 34789999999999877777653 1 1
Q ss_pred cccceEEEEcCCCC
Q 007536 517 AVVKSVVLINSAGN 530 (599)
Q Consensus 517 ~~v~~lvli~~~~~ 530 (599)
-.++|+++-++...
T Consensus 201 iNLkG~~IGNg~td 214 (454)
T KOG1282|consen 201 INLKGYAIGNGLTD 214 (454)
T ss_pred ccceEEEecCcccC
Confidence 35788887777533
No 217
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=88.90 E-value=3.6 Score=39.81 Aligned_cols=101 Identities=20% Similarity=0.132 Sum_probs=61.0
Q ss_pred CCeEEEECCCCCChHHHHHH----HHHHHhCCCEEEEEcCCC----CCCCCC---------CC----------------C
Q 007536 427 GPAILLVHGFGAFLEHYRDN----IYDIADGGNRVWAITLLG----FGRSEK---------PN----------------I 473 (599)
Q Consensus 427 ~p~vlllHG~~~~~~~w~~~----~~~l~~~g~~vi~~D~~G----~G~S~~---------~~----------------~ 473 (599)
++-||||||+-.+...+..- -..|.+. +..+.+|-|- -+.++. +. .
T Consensus 5 k~rvLcLHGfrQsg~~F~~Ktg~~rK~l~k~-~el~f~~aPh~~~~~~~~~~~~~~~~~a~~~~~~~~~~Wf~~n~~~~~ 83 (230)
T KOG2551|consen 5 KLRVLCLHGFRQSGKVFSEKTGSLRKLLKKL-AELVFPDAPHELPKADLPDSEREKKFDAPPDVEQNRYGWFSNNEASFT 83 (230)
T ss_pred CceEEEecchhhccHHHHHHhhhHHHHHHhh-heEEecCCCccCCcccCCcccccccccCCcccccchhhhhcccccccc
Confidence 57799999999998877643 3344444 7777777762 111110 10 0
Q ss_pred -CCCHHHHHHHHHHHHHHhCCCCEEEEEeChHHHHHHHHHHh---------CCcccceEEEEcCCCC
Q 007536 474 -VYTELMWSELLRDFTVEVVGEPVHLIGNSIGGYFVAIVACL---------WPAVVKSVVLINSAGN 530 (599)
Q Consensus 474 -~~~~~~~~~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~---------~p~~v~~lvli~~~~~ 530 (599)
....+...+.|.+.+.+.+- =--|+|+|.|+.++..++.. +| .++=+|++++...
T Consensus 84 ~~~~~eesl~yl~~~i~enGP-FDGllGFSQGA~laa~l~~~~~~~~~~~~~P-~~kF~v~~SGf~~ 148 (230)
T KOG2551|consen 84 EYFGFEESLEYLEDYIKENGP-FDGLLGFSQGAALAALLAGLGQKGLPYVKQP-PFKFAVFISGFKF 148 (230)
T ss_pred cccChHHHHHHHHHHHHHhCC-CccccccchhHHHHHHhhcccccCCcccCCC-CeEEEEEEecCCC
Confidence 11223334455555555441 13588999999999988872 12 3577888887644
No 218
>PLN02324 triacylglycerol lipase
Probab=88.55 E-value=0.7 Score=49.09 Aligned_cols=34 Identities=18% Similarity=0.247 Sum_probs=24.8
Q ss_pred HHHHHHHHHHhCCC--CEEEEEeChHHHHHHHHHHh
Q 007536 481 SELLRDFTVEVVGE--PVHLIGNSIGGYFVAIVACL 514 (599)
Q Consensus 481 ~~~l~~~l~~l~~~--~~~lvGhS~Gg~ia~~~a~~ 514 (599)
.+.|..+++....+ ++++.|||+||++|...|..
T Consensus 200 l~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~d 235 (415)
T PLN02324 200 QGELKRLLELYKNEEISITFTGHSLGAVMSVLSAAD 235 (415)
T ss_pred HHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHHH
Confidence 34455556555442 69999999999999988764
No 219
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=88.35 E-value=0.77 Score=51.46 Aligned_cols=104 Identities=16% Similarity=0.142 Sum_probs=62.2
Q ss_pred CCeEEEECCCCC---ChHHHHHH--HHHHHhCCCEEEEEcCC----CCCCCC--CCCCCCCHHHH---HHHHHHHHHHhC
Q 007536 427 GPAILLVHGFGA---FLEHYRDN--IYDIADGGNRVWAITLL----GFGRSE--KPNIVYTELMW---SELLRDFTVEVV 492 (599)
Q Consensus 427 ~p~vlllHG~~~---~~~~w~~~--~~~l~~~g~~vi~~D~~----G~G~S~--~~~~~~~~~~~---~~~l~~~l~~l~ 492 (599)
-|++|++||.+- +...+... ...+...+.-|+.+.+| |+.... ..++.+.+.++ .+++.+-|...+
T Consensus 112 ~pV~V~iHGG~~~~gs~~~~~~~~~~~~~~~~~VVvVt~~YRLG~lGF~st~d~~~~gN~gl~Dq~~AL~wv~~~I~~FG 191 (545)
T KOG1516|consen 112 LPVMVYIHGGGFQFGSASSFEIISPAYVLLLKDVVVVTINYRLGPLGFLSTGDSAAPGNLGLFDQLLALRWVKDNIPSFG 191 (545)
T ss_pred CCEEEEEeCCceeeccccchhhcCchhccccCCEEEEEecccceeceeeecCCCCCCCcccHHHHHHHHHHHHHHHHhcC
Confidence 588999999853 32223222 22233334666777766 432221 12345555444 345666677777
Q ss_pred C--CCEEEEEeChHHHHHHHHHHh--CCcccceEEEEcCCCC
Q 007536 493 G--EPVHLIGNSIGGYFVAIVACL--WPAVVKSVVLINSAGN 530 (599)
Q Consensus 493 ~--~~~~lvGhS~Gg~ia~~~a~~--~p~~v~~lvli~~~~~ 530 (599)
+ ++|.|+|||.||..+..+... ....+.++|.+++...
T Consensus 192 Gdp~~vTl~G~saGa~~v~~l~~Sp~s~~LF~~aI~~SG~~~ 233 (545)
T KOG1516|consen 192 GDPKNVTLFGHSAGAASVSLLTLSPHSRGLFHKAISMSGNAL 233 (545)
T ss_pred CCCCeEEEEeechhHHHHHHHhcCHhhHHHHHHHHhhccccc
Confidence 6 579999999999998766542 1245777777777543
No 220
>PLN02310 triacylglycerol lipase
Probab=88.29 E-value=1.2 Score=47.43 Aligned_cols=36 Identities=14% Similarity=0.147 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHHhC----CCCEEEEEeChHHHHHHHHHHh
Q 007536 479 MWSELLRDFTVEVV----GEPVHLIGNSIGGYFVAIVACL 514 (599)
Q Consensus 479 ~~~~~l~~~l~~l~----~~~~~lvGhS~Gg~ia~~~a~~ 514 (599)
++.+.|..+++... ..++++.|||+||++|..+|..
T Consensus 190 qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~d 229 (405)
T PLN02310 190 QVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYE 229 (405)
T ss_pred HHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHH
Confidence 34445556565543 1369999999999999887753
No 221
>PLN02802 triacylglycerol lipase
Probab=87.62 E-value=0.8 Score=49.68 Aligned_cols=35 Identities=23% Similarity=0.313 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHhCCC--CEEEEEeChHHHHHHHHHHh
Q 007536 480 WSELLRDFTVEVVGE--PVHLIGNSIGGYFVAIVACL 514 (599)
Q Consensus 480 ~~~~l~~~l~~l~~~--~~~lvGhS~Gg~ia~~~a~~ 514 (599)
+.+.|..+++....+ ++++.|||+||++|..+|..
T Consensus 314 Vl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~d 350 (509)
T PLN02802 314 VVGEVRRLMEKYKGEELSITVTGHSLGAALALLVADE 350 (509)
T ss_pred HHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHH
Confidence 344455555555442 68999999999999987764
No 222
>PLN02753 triacylglycerol lipase
Probab=86.85 E-value=0.94 Score=49.36 Aligned_cols=34 Identities=18% Similarity=0.238 Sum_probs=24.6
Q ss_pred HHHHHHHHHHhCC-----CCEEEEEeChHHHHHHHHHHh
Q 007536 481 SELLRDFTVEVVG-----EPVHLIGNSIGGYFVAIVACL 514 (599)
Q Consensus 481 ~~~l~~~l~~l~~-----~~~~lvGhS~Gg~ia~~~a~~ 514 (599)
...|..+++.... -++++.|||+||++|...|..
T Consensus 294 l~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~D 332 (531)
T PLN02753 294 LTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAYD 332 (531)
T ss_pred HHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHHH
Confidence 3445555555432 479999999999999988753
No 223
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=86.46 E-value=5.2 Score=39.45 Aligned_cols=102 Identities=13% Similarity=0.040 Sum_probs=63.1
Q ss_pred eEEEECCCCCC-hHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCC---CEEEEEeChH
Q 007536 429 AILLVHGFGAF-LEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNIVYTELMWSELLRDFTVEVVGE---PVHLIGNSIG 504 (599)
Q Consensus 429 ~vlllHG~~~~-~~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~---~~~lvGhS~G 504 (599)
|+|+|=||.+. .......++...+.|++++.+-.+-....... -.....++.+.+.+...... ++++-.+|+|
T Consensus 1 plvvl~gW~gA~~~hl~KY~~~Y~~~g~~il~~~~~~~~~~~~~---~~~~~~~~~l~~~l~~~~~~~~~~il~H~FSnG 77 (240)
T PF05705_consen 1 PLVVLLGWMGAKPKHLAKYSDLYQDPGFDILLVTSPPADFFWPS---KRLAPAADKLLELLSDSQSASPPPILFHSFSNG 77 (240)
T ss_pred CEEEEEeCCCCCHHHHHHHHHHHHhcCCeEEEEeCCHHHHeeec---cchHHHHHHHHHHhhhhccCCCCCEEEEEEECc
Confidence 46777788654 45666677777678999999966533222111 23344445455555444332 8999999998
Q ss_pred HHHHHHHHHh---------CC-cccceEEEEcCCCCCCC
Q 007536 505 GYFVAIVACL---------WP-AVVKSVVLINSAGNVIP 533 (599)
Q Consensus 505 g~ia~~~a~~---------~p-~~v~~lvli~~~~~~~~ 533 (599)
|...+..... .+ .+++|+|+=++++....
T Consensus 78 G~~~~~~l~~~~~~~~~~~~~~~~i~g~I~DS~P~~~~~ 116 (240)
T PF05705_consen 78 GSFLYSQLLEAYQSRKKFGKLLPRIKGIIFDSCPGIPTY 116 (240)
T ss_pred hHHHHHHHHHHHHhcccccccccccceeEEeCCCCcccc
Confidence 8777665431 11 24889887777655443
No 224
>PLN02719 triacylglycerol lipase
Probab=85.85 E-value=1.1 Score=48.60 Aligned_cols=34 Identities=15% Similarity=0.224 Sum_probs=24.0
Q ss_pred HHHHHHHHHHhCC-----CCEEEEEeChHHHHHHHHHHh
Q 007536 481 SELLRDFTVEVVG-----EPVHLIGNSIGGYFVAIVACL 514 (599)
Q Consensus 481 ~~~l~~~l~~l~~-----~~~~lvGhS~Gg~ia~~~a~~ 514 (599)
...|..+++.... .++++.|||+||++|..+|..
T Consensus 280 l~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~D 318 (518)
T PLN02719 280 LTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYD 318 (518)
T ss_pred HHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHH
Confidence 3444455554432 379999999999999988753
No 225
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=85.50 E-value=3.7 Score=48.54 Aligned_cols=94 Identities=15% Similarity=0.189 Sum_probs=64.4
Q ss_pred CCCeEEEECCCCCChHHHHHHHHHHHhCCCEEEEEcCCCCCCCC-CCCCCCCHHHHHHHHHHHHHHhCC-CCEEEEEeCh
Q 007536 426 EGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSE-KPNIVYTELMWSELLRDFTVEVVG-EPVHLIGNSI 503 (599)
Q Consensus 426 ~~p~vlllHG~~~~~~~w~~~~~~l~~~g~~vi~~D~~G~G~S~-~~~~~~~~~~~~~~l~~~l~~l~~-~~~~lvGhS~ 503 (599)
++|++.|+|.+-+.......++..| ..|.+|.-. ..-..-+++..+.....-+..+.. .|..++|.|+
T Consensus 2122 e~~~~Ffv~pIEG~tt~l~~la~rl----------e~PaYglQ~T~~vP~dSies~A~~yirqirkvQP~GPYrl~GYSy 2191 (2376)
T KOG1202|consen 2122 EEPPLFFVHPIEGFTTALESLASRL----------EIPAYGLQCTEAVPLDSIESLAAYYIRQIRKVQPEGPYRLAGYSY 2191 (2376)
T ss_pred cCCceEEEeccccchHHHHHHHhhc----------CCcchhhhccccCCcchHHHHHHHHHHHHHhcCCCCCeeeeccch
Confidence 5899999999988776665555443 234444322 222234677777765555665543 7999999999
Q ss_pred HHHHHHHHHHhC--CcccceEEEEcCCC
Q 007536 504 GGYFVAIVACLW--PAVVKSVVLINSAG 529 (599)
Q Consensus 504 Gg~ia~~~a~~~--p~~v~~lvli~~~~ 529 (599)
|+.++..+|..- .+....+|++++++
T Consensus 2192 G~~l~f~ma~~Lqe~~~~~~lillDGsp 2219 (2376)
T KOG1202|consen 2192 GACLAFEMASQLQEQQSPAPLILLDGSP 2219 (2376)
T ss_pred hHHHHHHHHHHHHhhcCCCcEEEecCch
Confidence 999999998753 34466799999863
No 226
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=85.25 E-value=1.9 Score=44.98 Aligned_cols=39 Identities=26% Similarity=0.384 Sum_probs=30.0
Q ss_pred CCCCEEEEEeChHHHHHHHHHHhCCc-----ccceEEEEcCCCC
Q 007536 492 VGEPVHLIGNSIGGYFVAIVACLWPA-----VVKSVVLINSAGN 530 (599)
Q Consensus 492 ~~~~~~lvGhS~Gg~ia~~~a~~~p~-----~v~~lvli~~~~~ 530 (599)
+..|+.|||||+|+-+.......-.+ .|..+++++++..
T Consensus 218 G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv~ 261 (345)
T PF05277_consen 218 GERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPVP 261 (345)
T ss_pred CCCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCCC
Confidence 45689999999999998876554332 4899999987644
No 227
>PLN02847 triacylglycerol lipase
Probab=85.23 E-value=1.3 Score=48.87 Aligned_cols=26 Identities=23% Similarity=0.422 Sum_probs=20.7
Q ss_pred HHhCCCCEEEEEeChHHHHHHHHHHh
Q 007536 489 VEVVGEPVHLIGNSIGGYFVAIVACL 514 (599)
Q Consensus 489 ~~l~~~~~~lvGhS~Gg~ia~~~a~~ 514 (599)
.....-+++++|||+||.+|..++..
T Consensus 246 ~~~PdYkLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 246 DEYPDFKIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred HHCCCCeEEEeccChHHHHHHHHHHH
Confidence 33444589999999999999888764
No 228
>PLN03037 lipase class 3 family protein; Provisional
Probab=85.02 E-value=1.3 Score=48.28 Aligned_cols=35 Identities=17% Similarity=0.211 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHhCC----CCEEEEEeChHHHHHHHHHHh
Q 007536 480 WSELLRDFTVEVVG----EPVHLIGNSIGGYFVAIVACL 514 (599)
Q Consensus 480 ~~~~l~~~l~~l~~----~~~~lvGhS~Gg~ia~~~a~~ 514 (599)
..+.|..+++.... .+++|.|||+||++|...|..
T Consensus 300 Vl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~D 338 (525)
T PLN03037 300 VMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYE 338 (525)
T ss_pred HHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHH
Confidence 34455666655431 369999999999999888754
No 229
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=84.77 E-value=0.6 Score=51.04 Aligned_cols=94 Identities=18% Similarity=0.125 Sum_probs=58.8
Q ss_pred CCeEEEECCCC----CChH--HHHHHHHHHHhCCCEEEEEcCC-CCCCCCCCCCCCCHHHHHHHHHHHHH--------Hh
Q 007536 427 GPAILLVHGFG----AFLE--HYRDNIYDIADGGNRVWAITLL-GFGRSEKPNIVYTELMWSELLRDFTV--------EV 491 (599)
Q Consensus 427 ~p~vlllHG~~----~~~~--~w~~~~~~l~~~g~~vi~~D~~-G~G~S~~~~~~~~~~~~~~~l~~~l~--------~l 491 (599)
.|.++++||.+ ++.. .|+....-..+ -..|.++|++ +.| ..++...++.+..+.. ++
T Consensus 176 spl~i~aps~p~ap~tSd~~~~wqs~lsl~ge-vvev~tfdl~n~ig-------G~nI~h~ae~~vSf~r~kvlei~gef 247 (784)
T KOG3253|consen 176 SPLAIKAPSTPLAPKTSDRMWSWQSRLSLKGE-VVEVPTFDLNNPIG-------GANIKHAAEYSVSFDRYKVLEITGEF 247 (784)
T ss_pred CceEEeccCCCCCCccchHHHhHHHHHhhhce-eeeeccccccCCCC-------CcchHHHHHHHHHHhhhhhhhhhccC
Confidence 57789999987 1222 23333333333 2667777876 222 1344444554444433 23
Q ss_pred CCCCEEEEEeChHHHHHHHHHHhCC-cccceEEEEcCC
Q 007536 492 VGEPVHLIGNSIGGYFVAIVACLWP-AVVKSVVLINSA 528 (599)
Q Consensus 492 ~~~~~~lvGhS~Gg~ia~~~a~~~p-~~v~~lvli~~~ 528 (599)
...+++|+|.|||+.++.+.+.... ..|+++|+|+-+
T Consensus 248 pha~IiLvGrsmGAlVachVSpsnsdv~V~~vVCigyp 285 (784)
T KOG3253|consen 248 PHAPIILVGRSMGALVACHVSPSNSDVEVDAVVCIGYP 285 (784)
T ss_pred CCCceEEEecccCceeeEEeccccCCceEEEEEEeccc
Confidence 3478999999999988888776543 349999999865
No 230
>PLN02761 lipase class 3 family protein
Probab=84.54 E-value=1.4 Score=47.96 Aligned_cols=34 Identities=15% Similarity=0.207 Sum_probs=24.1
Q ss_pred HHHHHHHHHHHhC----C--CCEEEEEeChHHHHHHHHHH
Q 007536 480 WSELLRDFTVEVV----G--EPVHLIGNSIGGYFVAIVAC 513 (599)
Q Consensus 480 ~~~~l~~~l~~l~----~--~~~~lvGhS~Gg~ia~~~a~ 513 (599)
+...|..+++... . -++++.|||+||++|...|.
T Consensus 274 Vl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~ 313 (527)
T PLN02761 274 VLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAY 313 (527)
T ss_pred HHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHH
Confidence 3444555555542 1 36999999999999998775
No 231
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=82.33 E-value=1.9 Score=45.13 Aligned_cols=37 Identities=19% Similarity=0.200 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHHHhCCCCEEEEEeChHHHHHHHHHHh
Q 007536 478 LMWSELLRDFTVEVVGEPVHLIGNSIGGYFVAIVACL 514 (599)
Q Consensus 478 ~~~~~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~ 514 (599)
..+.+.+..++.....-.+.+-|||+||++|..+|..
T Consensus 155 ~~~~~~~~~L~~~~~~~~i~vTGHSLGgAlA~laa~~ 191 (336)
T KOG4569|consen 155 SGLDAELRRLIELYPNYSIWVTGHSLGGALASLAALD 191 (336)
T ss_pred HHHHHHHHHHHHhcCCcEEEEecCChHHHHHHHHHHH
Confidence 4566777777877777789999999999999887764
No 232
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=81.99 E-value=1.1 Score=49.63 Aligned_cols=102 Identities=16% Similarity=0.103 Sum_probs=67.6
Q ss_pred CCeEEEECCCCC-Ch-HHHHHHHHHHHhCCCEEEEEcCCCCCCCC---CCCC-----CCCHHHHHHHHHHHHHHhC--CC
Q 007536 427 GPAILLVHGFGA-FL-EHYRDNIYDIADGGNRVWAITLLGFGRSE---KPNI-----VYTELMWSELLRDFTVEVV--GE 494 (599)
Q Consensus 427 ~p~vlllHG~~~-~~-~~w~~~~~~l~~~g~~vi~~D~~G~G~S~---~~~~-----~~~~~~~~~~l~~~l~~l~--~~ 494 (599)
.|.+|..+|.-+ +. -.|..---.|.+.|+-....|.||=|.=. ...+ ..+++++......+++.-- ..
T Consensus 470 ~P~LLygYGay~isl~p~f~~srl~lld~G~Vla~a~VRGGGe~G~~WHk~G~lakKqN~f~Dfia~AeyLve~gyt~~~ 549 (712)
T KOG2237|consen 470 KPLLLYGYGAYGISLDPSFRASRLSLLDRGWVLAYANVRGGGEYGEQWHKDGRLAKKQNSFDDFIACAEYLVENGYTQPS 549 (712)
T ss_pred CceEEEEecccceeeccccccceeEEEecceEEEEEeeccCcccccchhhccchhhhcccHHHHHHHHHHHHHcCCCCcc
Confidence 566666666422 22 24544444456678888888999876533 2222 2355566555555554321 26
Q ss_pred CEEEEEeChHHHHHHHHHHhCCcccceEEEEcCC
Q 007536 495 PVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSA 528 (599)
Q Consensus 495 ~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~ 528 (599)
+..+.|.|.||.++..+..++|+.+.++|+--|.
T Consensus 550 kL~i~G~SaGGlLvga~iN~rPdLF~avia~Vpf 583 (712)
T KOG2237|consen 550 KLAIEGGSAGGLLVGACINQRPDLFGAVIAKVPF 583 (712)
T ss_pred ceeEecccCccchhHHHhccCchHhhhhhhcCcc
Confidence 7999999999999999999999999988875553
No 233
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=80.14 E-value=1.6 Score=47.94 Aligned_cols=117 Identities=17% Similarity=0.162 Sum_probs=75.3
Q ss_pred EECCEEEEEEEcCC----C-CCeEEEECCCCCCh--HHHHHHHHHHHhCCCEEEEEcCCCCCCCCCC--------CCCCC
Q 007536 412 RWNGYQIQYTVAGK----E-GPAILLVHGFGAFL--EHYRDNIYDIADGGNRVWAITLLGFGRSEKP--------NIVYT 476 (599)
Q Consensus 412 ~~~g~~l~y~~~g~----~-~p~vlllHG~~~~~--~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~--------~~~~~ 476 (599)
.-||.+|.|...+. + .|++|+-=|...-+ -.|........++|...+..+.||=|.=... ...-.
T Consensus 401 SkDGT~IPYFiv~K~~~~d~~pTll~aYGGF~vsltP~fs~~~~~WLerGg~~v~ANIRGGGEfGp~WH~Aa~k~nrq~v 480 (648)
T COG1505 401 SKDGTRIPYFIVRKGAKKDENPTLLYAYGGFNISLTPRFSGSRKLWLERGGVFVLANIRGGGEFGPEWHQAGMKENKQNV 480 (648)
T ss_pred cCCCccccEEEEecCCcCCCCceEEEeccccccccCCccchhhHHHHhcCCeEEEEecccCCccCHHHHHHHhhhcchhh
Confidence 45899999987641 1 45554443332211 2344555555677898999999998864321 11223
Q ss_pred HHHHHHHHHHHHHHhCC--CCEEEEEeChHHHHHHHHHHhCCcccceEEEEcCC
Q 007536 477 ELMWSELLRDFTVEVVG--EPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSA 528 (599)
Q Consensus 477 ~~~~~~~l~~~l~~l~~--~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~ 528 (599)
.+++...+.+++++--. +++-+-|-|-||.+.-.+..++|+.+.++|+--|.
T Consensus 481 fdDf~AVaedLi~rgitspe~lgi~GgSNGGLLvg~alTQrPelfgA~v~evPl 534 (648)
T COG1505 481 FDDFIAVAEDLIKRGITSPEKLGIQGGSNGGLLVGAALTQRPELFGAAVCEVPL 534 (648)
T ss_pred hHHHHHHHHHHHHhCCCCHHHhhhccCCCCceEEEeeeccChhhhCceeeccch
Confidence 44555555555443221 57899999999999988888999988887765553
No 234
>PRK12652 putative monovalent cation/H+ antiporter subunit E; Reviewed
Probab=79.93 E-value=13 Score=39.25 Aligned_cols=102 Identities=16% Similarity=0.117 Sum_probs=61.4
Q ss_pred CHHHHHHHhC-------CCeEEEEEeCCcccccCCHhHHHHHHHHHHHHHHHHHh------cCCcEEEEE----------
Q 007536 60 HLGLVAASKY-------QAVVPLYVFDHRILSRYSNEMLELVIFALEDLRKSLKE------QGSDLMIRF---------- 116 (599)
Q Consensus 60 N~aL~~A~~~-------~~v~~vfi~d~~~~~~~~~~r~~Fl~~sL~~L~~~L~~------~g~~L~v~~---------- 116 (599)
+.|+.+|++. ..|..+++.++.........-..---+-+.+.++.+++ .|+......
T Consensus 19 ~~Al~~AielA~~~g~~AeL~lL~Vv~~~~~~~~~~~~~~~~eelle~~~~~~~~~l~~~~~gV~ve~~vv~~~~~~~~~ 98 (357)
T PRK12652 19 RQTVAYAVESAEEAAETPTVHLVAAASGRAVDPEGQDELAAAEELLERVEVWATEDLGDDASSVTIETALLGTDEYLFGP 98 (357)
T ss_pred HHHHHHHHHHHHhcCCCCEEEEEEEecCcccccchhHHHHHHHHHHHHHHHHHHHhhhcccCCCceEEEEEeccccccCC
Confidence 3466666532 36888999886432211110001111234444444443 477644433
Q ss_pred cCHHHHHHHHHHHhCCcEEEEccccChhHH-HHHHHHHHHHHhccc
Q 007536 117 GRVENVIRELVEEVKATSVFAEEEVEYHLR-QMMAIVDETLAKVSL 161 (599)
Q Consensus 117 g~~~~~l~~l~~~~~~~~v~~~~~~~~~~~-~~d~~v~~~l~~~gi 161 (599)
|+|.+.+.+.+++.+++.|+.+-+|.|... ..-+-+...|.+.|+
T Consensus 99 G~pae~Iv~~Aee~~aDLIVm~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (357)
T PRK12652 99 GDYAEVLIAYAEEHGIDRVVLDPEYNPGGTAPMLQPLERELARAGI 144 (357)
T ss_pred CCHHHHHHHHHHHcCCCEEEECCCCCCCCCCcccchHHHHHHhcCC
Confidence 899999999999999999999999987654 233345555666554
No 235
>TIGR00289 conserved hypothetical protein TIGR00289. Homologous proteins related to MJ0570 of Methanococcus jannaschii include both the apparent orthologs found by this model above the trusted cutoff, the much longer protein YLR143W from Saccharomyces cerevisiae, and second homologous proteins from Archaeoglobus fulgidus and Pyrococcus horikoshii that appear to represent a second orthologous group.
Probab=78.47 E-value=12 Score=36.63 Aligned_cols=94 Identities=13% Similarity=0.027 Sum_probs=60.4
Q ss_pred CHHHHHHHhCCCeEEEEEeCCcccccCCHhHHHHHHHHHHHHHHHHHhcCCcEEEEE--cC---HHHHHHHHHHHhCCcE
Q 007536 60 HLGLVAASKYQAVVPLYVFDHRILSRYSNEMLELVIFALEDLRKSLKEQGSDLMIRF--GR---VENVIRELVEEVKATS 134 (599)
Q Consensus 60 N~aL~~A~~~~~v~~vfi~d~~~~~~~~~~r~~Fl~~sL~~L~~~L~~~g~~L~v~~--g~---~~~~l~~l~~~~~~~~ 134 (599)
+-||+.|.+...+..++..-+.... +..|-...+..++.+.+.+|+||+... |. ..+.+.+..++.++++
T Consensus 14 ~lAl~~~~~~~~V~~L~~~~~~~~~-----s~~~h~~~~~~~~~qA~algiPl~~~~~~~~~e~~~~~l~~~l~~~gv~~ 88 (222)
T TIGR00289 14 ILALYKALEEHEVISLVGVFSENEE-----SYMFHSPNLHLTDLVAEAVGIPLIKLYTSGEEEKEVEDLAGQLGELDVEA 88 (222)
T ss_pred HHHHHHHHHcCeeEEEEEEcCCCCC-----ccccccCCHHHHHHHHHHcCCCeEEEEcCCchhHHHHHHHHHHHHcCCCE
Confidence 3467777655556677766654321 222333466777888899999998765 32 3334444456668999
Q ss_pred EEEccccChhHHHHHHHHHHHHHhccc
Q 007536 135 VFAEEEVEYHLRQMMAIVDETLAKVSL 161 (599)
Q Consensus 135 v~~~~~~~~~~~~~d~~v~~~l~~~gi 161 (599)
|++-.-...+.+.+.+++ |.+.|+
T Consensus 89 vv~GdI~s~~qr~~~e~v---c~~~gl 112 (222)
T TIGR00289 89 LCIGAIESNYQKSRIDKV---CRELGL 112 (222)
T ss_pred EEECccccHHHHHHHHHH---HHHcCC
Confidence 999888877777765555 554554
No 236
>cd01989 STK_N The N-terminal domain of Eukaryotic Serine Threonine kinases. The Serine Threonine kinases are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. The N-terminal domain is homologous to the USP family which has a ATP binding fold. The N-terminal domain is predicted to be involved in ATP binding.
Probab=76.73 E-value=35 Score=30.27 Aligned_cols=83 Identities=17% Similarity=0.013 Sum_probs=50.5
Q ss_pred CCCHHHHHHHhC-----CCeEEEEEeCCcccccC--C-----H----hHHHHHHHHHHHHHHHHHhcCCc--EEEEEc-C
Q 007536 58 DDHLGLVAASKY-----QAVVPLYVFDHRILSRY--S-----N----EMLELVIFALEDLRKSLKEQGSD--LMIRFG-R 118 (599)
Q Consensus 58 ~DN~aL~~A~~~-----~~v~~vfi~d~~~~~~~--~-----~----~r~~Fl~~sL~~L~~~L~~~g~~--L~v~~g-~ 118 (599)
.-..||.+|++. .++..+++.++...... + . ....-..+-|.+..+.+++.|+. ..+..| +
T Consensus 11 ~s~~al~~a~~~a~~~~~~l~ll~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~~ 90 (146)
T cd01989 11 KSKNALKWALDNLATKGQTIVLVHVHPPITSIPSSSGKLEVASAYKQEEDKEAKELLLPYRCFCSRKGVQCEDVVLEDDD 90 (146)
T ss_pred ccHHHHHHHHHhccCCCCcEEEEEeccCcccCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEEEEEEeCCc
Confidence 344677777643 57889999876432111 0 0 00112223344444555555654 455565 8
Q ss_pred HHHHHHHHHHHhCCcEEEEccc
Q 007536 119 VENVIRELVEEVKATSVFAEEE 140 (599)
Q Consensus 119 ~~~~l~~l~~~~~~~~v~~~~~ 140 (599)
+.+.|.+.+++.+++.|+.-..
T Consensus 91 ~~~~I~~~a~~~~~dlIV~Gs~ 112 (146)
T cd01989 91 VAKAIVEYVADHGITKLVMGAS 112 (146)
T ss_pred HHHHHHHHHHHcCCCEEEEecc
Confidence 9999999999999998877654
No 237
>PRK09982 universal stress protein UspD; Provisional
Probab=76.58 E-value=23 Score=31.65 Aligned_cols=81 Identities=14% Similarity=0.122 Sum_probs=50.8
Q ss_pred CHHHHHHHhC-----CCeEEEEEeCCcccc--c-C--C-Hh----HHHHHHHHHHHHHHHHHhcCCcEEEEEcCHHHHHH
Q 007536 60 HLGLVAASKY-----QAVVPLYVFDHRILS--R-Y--S-NE----MLELVIFALEDLRKSLKEQGSDLMIRFGRVENVIR 124 (599)
Q Consensus 60 N~aL~~A~~~-----~~v~~vfi~d~~~~~--~-~--~-~~----r~~Fl~~sL~~L~~~L~~~g~~L~v~~g~~~~~l~ 124 (599)
..||.+|++. ..+..+++.++.... . . . .. ......+.|.++.+++...++...+..|+|.+.+.
T Consensus 17 ~~al~~A~~lA~~~~a~l~llhV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~v~~G~p~~~I~ 96 (142)
T PRK09982 17 ALLVNKALELARHNDAHLTLIHIDDGLSELYPGIYFPATEDILQLLKNKSDNKLYKLTKNIQWPKTKLRIERGEMPETLL 96 (142)
T ss_pred HHHHHHHHHHHHHhCCeEEEEEEccCcchhchhhhccchHHHHHHHHHHHHHHHHHHHHhcCCCcceEEEEecCHHHHHH
Confidence 4677777632 578889998753210 0 0 0 01 11122223444444444445677888999999999
Q ss_pred HHHHHhCCcEEEEccc
Q 007536 125 ELVEEVKATSVFAEEE 140 (599)
Q Consensus 125 ~l~~~~~~~~v~~~~~ 140 (599)
+.+++.+++-|+.-..
T Consensus 97 ~~A~~~~aDLIVmG~~ 112 (142)
T PRK09982 97 EIMQKEQCDLLVCGHH 112 (142)
T ss_pred HHHHHcCCCEEEEeCC
Confidence 9999999998888754
No 238
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=76.56 E-value=6.2 Score=43.47 Aligned_cols=40 Identities=18% Similarity=0.348 Sum_probs=29.9
Q ss_pred CCEEEEEeChHHHHHHHHHHh-----CCc------ccceEEEEcCCCCCCC
Q 007536 494 EPVHLIGNSIGGYFVAIVACL-----WPA------VVKSVVLINSAGNVIP 533 (599)
Q Consensus 494 ~~~~lvGhS~Gg~ia~~~a~~-----~p~------~v~~lvli~~~~~~~~ 533 (599)
.+++.|||||||.++-.+... .|+ ..+|+|+++.+....+
T Consensus 526 RPivwI~HSmGGLl~K~lLlda~~S~kP~ms~l~kNtrGiiFls~PHrGS~ 576 (697)
T KOG2029|consen 526 RPIVWIGHSMGGLLAKKLLLDAYCSSKPDMSNLNKNTRGIIFLSVPHRGSR 576 (697)
T ss_pred CceEEEecccchHHHHHHHHHHhhcCCchhhhhhccCCceEEEecCCCCCc
Confidence 689999999999988766543 343 4788999998755443
No 239
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=75.83 E-value=15 Score=36.14 Aligned_cols=75 Identities=23% Similarity=0.144 Sum_probs=43.8
Q ss_pred CCEEEEEcCCCC-CC-C--CCCCCCCCHHHHHHHHHHHHHHh--CCCCEEEEEeChHHHHHHHHHHhC-----Cc-ccce
Q 007536 454 GNRVWAITLLGF-GR-S--EKPNIVYTELMWSELLRDFTVEV--VGEPVHLIGNSIGGYFVAIVACLW-----PA-VVKS 521 (599)
Q Consensus 454 g~~vi~~D~~G~-G~-S--~~~~~~~~~~~~~~~l~~~l~~l--~~~~~~lvGhS~Gg~ia~~~a~~~-----p~-~v~~ 521 (599)
|+.+..+++|.. += + .......+...=++.+.+.+... ..++++++|+|+|+.++...+.+. +. ..-.
T Consensus 2 ~~~~~~V~YPa~f~P~~g~~~~t~~~Sv~~G~~~L~~ai~~~~~~~~~vvV~GySQGA~Va~~~~~~l~~~~~~~~~~l~ 81 (225)
T PF08237_consen 2 GYNVVAVDYPASFWPVTGIGSPTYDESVAEGVANLDAAIRAAIAAGGPVVVFGYSQGAVVASNVLRRLAADGDPPPDDLS 81 (225)
T ss_pred CcceEEecCCchhcCcCCCCCCccchHHHHHHHHHHHHHHhhccCCCCEEEEEECHHHHHHHHHHHHHHhcCCCCcCceE
Confidence 577788888851 10 0 00111223444445555555542 347899999999999998876642 11 2345
Q ss_pred EEEEcCC
Q 007536 522 VVLINSA 528 (599)
Q Consensus 522 lvli~~~ 528 (599)
+|+++-+
T Consensus 82 fVl~gnP 88 (225)
T PF08237_consen 82 FVLIGNP 88 (225)
T ss_pred EEEecCC
Confidence 6777665
No 240
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=75.57 E-value=9.7 Score=42.65 Aligned_cols=105 Identities=19% Similarity=0.190 Sum_probs=70.4
Q ss_pred CCeEEEECCCCCC-h-HHHHHHHHHHHhCCCEEEEEcCCCCCCCCCC--------CCCCCHHHHHHHHHHHHHHhCC--C
Q 007536 427 GPAILLVHGFGAF-L-EHYRDNIYDIADGGNRVWAITLLGFGRSEKP--------NIVYTELMWSELLRDFTVEVVG--E 494 (599)
Q Consensus 427 ~p~vlllHG~~~~-~-~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~--------~~~~~~~~~~~~l~~~l~~l~~--~ 494 (599)
.|.+|..=|.-+. . -.|....=.|.++|+-....--||=|.-... ...-++.++.+....+++.--. +
T Consensus 448 ~p~lLygYGaYG~s~~p~Fs~~~lSLlDRGfiyAIAHVRGGgelG~~WYe~GK~l~K~NTf~DFIa~a~~Lv~~g~~~~~ 527 (682)
T COG1770 448 APLLLYGYGAYGISMDPSFSIARLSLLDRGFVYAIAHVRGGGELGRAWYEDGKLLNKKNTFTDFIAAARHLVKEGYTSPD 527 (682)
T ss_pred CcEEEEEeccccccCCcCcccceeeeecCceEEEEEEeecccccChHHHHhhhhhhccccHHHHHHHHHHHHHcCcCCcc
Confidence 5666666664332 2 2344444457788874444455776654321 1244677777777776654333 5
Q ss_pred CEEEEEeChHHHHHHHHHHhCCcccceEEEEcCCCCC
Q 007536 495 PVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSAGNV 531 (599)
Q Consensus 495 ~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~~~~ 531 (599)
.++++|-|.||++....+...|+.++++|+--|...+
T Consensus 528 ~i~a~GGSAGGmLmGav~N~~P~lf~~iiA~VPFVDv 564 (682)
T COG1770 528 RIVAIGGSAGGMLMGAVANMAPDLFAGIIAQVPFVDV 564 (682)
T ss_pred ceEEeccCchhHHHHHHHhhChhhhhheeecCCccch
Confidence 7999999999999999999999999999988776543
No 241
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=74.68 E-value=35 Score=28.83 Aligned_cols=85 Identities=14% Similarity=0.049 Sum_probs=55.7
Q ss_pred hHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCCCH-HHHHHHHHHHHHHhCCCCEEEEEeChHH--HHHHHHHHhCC
Q 007536 440 LEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNIVYTE-LMWSELLRDFTVEVVGEPVHLIGNSIGG--YFVAIVACLWP 516 (599)
Q Consensus 440 ~~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~-~~~~~~l~~~l~~l~~~~~~lvGhS~Gg--~ia~~~a~~~p 516 (599)
+..|..+.+.+..+|+-.-.+.++..|.+......... +.=...+..+++.....++++||-|--. -+-..+|.++|
T Consensus 10 wnly~~l~~Fl~~~~~P~G~~~Lr~~~~~~~~~~~~~~~~~K~~~i~~i~~~fP~~kfiLIGDsgq~DpeiY~~ia~~~P 89 (100)
T PF09949_consen 10 WNLYPFLRDFLRRNGFPAGPLLLRDYGPSLSGLFKSGAEEHKRDNIERILRDFPERKFILIGDSGQHDPEIYAEIARRFP 89 (100)
T ss_pred HHHHHHHHHHHHhcCCCCCceEcccCCccccccccCCchhHHHHHHHHHHHHCCCCcEEEEeeCCCcCHHHHHHHHHHCC
Confidence 45566667777777787777788877655321111111 1224567788888888999999976433 23445788999
Q ss_pred cccceEEE
Q 007536 517 AVVKSVVL 524 (599)
Q Consensus 517 ~~v~~lvl 524 (599)
++|.++.+
T Consensus 90 ~~i~ai~I 97 (100)
T PF09949_consen 90 GRILAIYI 97 (100)
T ss_pred CCEEEEEE
Confidence 99998765
No 242
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=73.32 E-value=3.4 Score=40.87 Aligned_cols=102 Identities=16% Similarity=0.082 Sum_probs=63.2
Q ss_pred CCeEEEECCCCCChHHHH-HHHHHHHhCCCEEEEEcCCCCCCCCCCCC-CCCHHHH-------HHHHHHHHH------Hh
Q 007536 427 GPAILLVHGFGAFLEHYR-DNIYDIADGGNRVWAITLLGFGRSEKPNI-VYTELMW-------SELLRDFTV------EV 491 (599)
Q Consensus 427 ~p~vlllHG~~~~~~~w~-~~~~~l~~~g~~vi~~D~~G~G~S~~~~~-~~~~~~~-------~~~l~~~l~------~l 491 (599)
++.-|.+-|-|.+...-+ -+...+.++|...+.+.-|-+|+...+.. ...++.. ++.|+++.. +.
T Consensus 113 ~~KOG~~a~tgdh~y~rr~~L~~p~~k~~i~tmvle~pfYgqr~p~~q~~~~Le~vtDlf~mG~A~I~E~~~lf~Ws~~~ 192 (371)
T KOG1551|consen 113 ADLCLSWALTGDHVYTRRLVLSKPINKREIATMVLEKPFYGQRVPEEQIIHMLEYVTDLFKMGRATIQEFVKLFTWSSAD 192 (371)
T ss_pred CCeeEEEeecCCceeEeeeeecCchhhhcchheeeecccccccCCHHHHHHHHHHHHHHHHhhHHHHHHHHHhccccccc
Confidence 444555555555544333 23556667788999999999998654321 1111111 122233322 23
Q ss_pred CCCCEEEEEeChHHHHHHHHHHhCCcccceEEEEcCC
Q 007536 492 VGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSA 528 (599)
Q Consensus 492 ~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~ 528 (599)
+..++.|+|-||||.+|....+.++..|.-+=++++.
T Consensus 193 g~g~~~~~g~Smgg~~a~~vgS~~q~Pva~~p~l~~~ 229 (371)
T KOG1551|consen 193 GLGNLNLVGRSMGGDIANQVGSLHQKPVATAPCLNSS 229 (371)
T ss_pred CcccceeeeeecccHHHHhhcccCCCCcccccccccc
Confidence 4579999999999999999999888777666666553
No 243
>PRK15456 universal stress protein UspG; Provisional
Probab=72.18 E-value=20 Score=31.86 Aligned_cols=81 Identities=19% Similarity=0.174 Sum_probs=48.6
Q ss_pred CHHHHHHHhC----CCeEEEEEeCCcccccC----C------HhHHHHHHHHHHHHHHHHHhcCC--cEEEEEcCHHHHH
Q 007536 60 HLGLVAASKY----QAVVPLYVFDHRILSRY----S------NEMLELVIFALEDLRKSLKEQGS--DLMIRFGRVENVI 123 (599)
Q Consensus 60 N~aL~~A~~~----~~v~~vfi~d~~~~~~~----~------~~r~~Fl~~sL~~L~~~L~~~g~--~L~v~~g~~~~~l 123 (599)
..||.+|++. ..+..++++++...... . .....-..+.|.++.+.+...+. ..++..|++.+.+
T Consensus 18 ~~al~~A~~la~~~~~l~llhv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~~v~~G~~~~~I 97 (142)
T PRK15456 18 DKAVRHAEFLAQDDGVIHLLHVLPGSASLSLHRFAADVRRFEEHLQHEAEERLQTMVSHFTIDPSRIKQHVRFGSVRDEV 97 (142)
T ss_pred HHHHHHHHHHHhcCCeEEEEEEecCcccccccccccchhhHHHHHHHHHHHHHHHHHHHhCCCCcceEEEEcCCChHHHH
Confidence 3566666532 56788888876421100 0 01111222334445544433333 5677789999999
Q ss_pred HHHHHHhCCcEEEEccc
Q 007536 124 RELVEEVKATSVFAEEE 140 (599)
Q Consensus 124 ~~l~~~~~~~~v~~~~~ 140 (599)
.+.+++.+++-|+.-..
T Consensus 98 ~~~a~~~~~DLIVmG~~ 114 (142)
T PRK15456 98 NELAEELGADVVVIGSR 114 (142)
T ss_pred HHHHhhcCCCEEEEcCC
Confidence 99999999998887554
No 244
>COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism]
Probab=70.46 E-value=51 Score=33.43 Aligned_cols=101 Identities=10% Similarity=0.056 Sum_probs=73.3
Q ss_pred CCeEEEECCCCCCh-HHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCEEEEEeChH-
Q 007536 427 GPAILLVHGFGAFL-EHYRDNIYDIADGGNRVWAITLLGFGRSEKPNIVYTELMWSELLRDFTVEVVGEPVHLIGNSIG- 504 (599)
Q Consensus 427 ~p~vlllHG~~~~~-~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~lvGhS~G- 504 (599)
.|.||++--+.++. ...+..++.|... ..|+.-|+-.--.-.-..+.+++++..+.+.+++..++.+ +++++.+.-
T Consensus 103 dPkvLivapmsGH~aTLLR~TV~alLp~-~~vyitDW~dAr~Vp~~~G~FdldDYIdyvie~~~~~Gp~-~hv~aVCQP~ 180 (415)
T COG4553 103 DPKVLIVAPMSGHYATLLRGTVEALLPY-HDVYITDWVDARMVPLEAGHFDLDDYIDYVIEMINFLGPD-AHVMAVCQPT 180 (415)
T ss_pred CCeEEEEecccccHHHHHHHHHHHhccc-cceeEeeccccceeecccCCccHHHHHHHHHHHHHHhCCC-CcEEEEecCC
Confidence 35677777776664 4567788888875 8899999875444333456789999999999999888754 666666544
Q ss_pred ----HHHHHHHHHhCCcccceEEEEcCCC
Q 007536 505 ----GYFVAIVACLWPAVVKSVVLINSAG 529 (599)
Q Consensus 505 ----g~ia~~~a~~~p~~v~~lvli~~~~ 529 (599)
++++++.+...|..-..+++++++.
T Consensus 181 vPvLAAisLM~~~~~p~~PssMtlmGgPI 209 (415)
T COG4553 181 VPVLAAISLMEEDGDPNVPSSMTLMGGPI 209 (415)
T ss_pred chHHHHHHHHHhcCCCCCCceeeeecCcc
Confidence 4455555666788889999998863
No 245
>TIGR00290 MJ0570_dom MJ0570-related uncharacterized domain. Proteins with this uncharacterized domain include two apparent ortholog families in the Archaea, one of which is universal among the first four completed archaeal genomes, and YLR143W, a much longer protein from Saccharomyces cerevisiae. The domain comprises the full length of the archaeal proteins and the first third of the yeast protein.
Probab=69.99 E-value=33 Score=33.62 Aligned_cols=92 Identities=13% Similarity=0.073 Sum_probs=58.2
Q ss_pred CHHHHHHHhCCCeEEEEEeCCcccccCCHhHHHHHHH--HHHHHHHHHHhcCCcEEEEE-----cCHHHHHHHHHHHhCC
Q 007536 60 HLGLVAASKYQAVVPLYVFDHRILSRYSNEMLELVIF--ALEDLRKSLKEQGSDLMIRF-----GRVENVIRELVEEVKA 132 (599)
Q Consensus 60 N~aL~~A~~~~~v~~vfi~d~~~~~~~~~~r~~Fl~~--sL~~L~~~L~~~g~~L~v~~-----g~~~~~l~~l~~~~~~ 132 (599)
+-||+.|.+...++++...-|... .+ ++++ .+.-++.+-+.+|++|+... ++..+.+.++.++.++
T Consensus 14 ~~al~~a~~~~~v~~L~t~~~~~~-----~s--~~~H~~~~~~~~~qA~algipl~~~~~~~~~e~~~e~l~~~l~~~gv 86 (223)
T TIGR00290 14 CLALYHALKEHEVISLVNIMPENE-----ES--YMFHGVNAHLTDLQAESIGIPLIKLYTEGTEEDEVEELKGILHTLDV 86 (223)
T ss_pred HHHHHHHHHhCeeEEEEEEecCCC-----Cc--ccccccCHHHHHHHHHHcCCCeEEeecCCCccHHHHHHHHHHHHcCC
Confidence 457888876544555555444321 12 2333 45556667788899997743 2355566666677799
Q ss_pred cEEEEccccChhHHHHHHHHHHHHHhccc
Q 007536 133 TSVFAEEEVEYHLRQMMAIVDETLAKVSL 161 (599)
Q Consensus 133 ~~v~~~~~~~~~~~~~d~~v~~~l~~~gi 161 (599)
++|++-.-...+.+.+.+++ |.+.|+
T Consensus 87 ~~vv~GdI~s~~qr~~~e~v---~~~lgl 112 (223)
T TIGR00290 87 EAVVFGAIYSEYQKTRIERV---CRELGL 112 (223)
T ss_pred CEEEECCcccHHHHHHHHHH---HHhcCC
Confidence 99999888877777776555 444454
No 246
>cd01994 Alpha_ANH_like_IV This is a subfamily of Adenine nucleotide alpha hydrolases superfamily.Adeninosine nucleotide alpha hydrolases superfamily includes N type ATP PPases and ATP sulphurylases. It forms a apha/beta/apha fold which binds to Adenosine group. This subfamily of proteins is predicted to bind ATP. This domainhas a strongly conserved motif SGGKD at the N terminus.
Probab=69.77 E-value=27 Score=33.42 Aligned_cols=93 Identities=18% Similarity=0.113 Sum_probs=55.1
Q ss_pred HHHHHHHhC-CCeEEEEEeCCcccccCCHhHHHHHHHHHHHHHHHHHhcCCcEEEEE--c---CHHHHHHHHHHHh---C
Q 007536 61 LGLVAASKY-QAVVPLYVFDHRILSRYSNEMLELVIFALEDLRKSLKEQGSDLMIRF--G---RVENVIRELVEEV---K 131 (599)
Q Consensus 61 ~aL~~A~~~-~~v~~vfi~d~~~~~~~~~~r~~Fl~~sL~~L~~~L~~~g~~L~v~~--g---~~~~~l~~l~~~~---~ 131 (599)
-+|+.|.+. ..++++++..+.... +..|-...+..+++..+.+|+++++.. + +..+.+.+.+++. +
T Consensus 14 ~al~~a~~~G~~v~~l~~~~~~~~~-----~~~~h~~~~e~~~~~A~~lgipl~~i~~~~~~e~~~~~l~~~l~~~~~~g 88 (194)
T cd01994 14 YALYRALEEGHEVVALLNLTPEEGS-----SMMYHTVNHELLELQAEAMGIPLIRIEISGEEEDEVEDLKELLRKLKEEG 88 (194)
T ss_pred HHHHHHHHcCCEEEEEEEEecCCCC-----cccccccCHHHHHHHHHHcCCcEEEEeCCCCchHHHHHHHHHHHHHHHcC
Confidence 356666665 467888877553221 111222356677788889999998875 2 2223333333332 5
Q ss_pred CcEEEEccccChhHHHHHHHHHHHHHhccc
Q 007536 132 ATSVFAEEEVEYHLRQMMAIVDETLAKVSL 161 (599)
Q Consensus 132 ~~~v~~~~~~~~~~~~~d~~v~~~l~~~gi 161 (599)
++.|+.-.-..-+.+.|.+++ |.+.|+
T Consensus 89 ~~~vv~G~i~sd~~~~~~e~~---~~~~gl 115 (194)
T cd01994 89 VDAVVFGAILSEYQRTRVERV---CERLGL 115 (194)
T ss_pred CCEEEECccccHHHHHHHHHH---HHHcCC
Confidence 888888877777777665555 444454
No 247
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=68.84 E-value=9.5 Score=38.20 Aligned_cols=33 Identities=18% Similarity=0.302 Sum_probs=24.7
Q ss_pred HHHHHHHhCCCCEEEEEeChHHHHHHHHHHhCC
Q 007536 484 LRDFTVEVVGEPVHLIGNSIGGYFVAIVACLWP 516 (599)
Q Consensus 484 l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p 516 (599)
+..+.+.....++.|-|||+||++|..+..++.
T Consensus 266 ~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~fg 298 (425)
T KOG4540|consen 266 LGAVRRIYPDARIWLTGHSLGGAIASLLGIRFG 298 (425)
T ss_pred HHHHHHhCCCceEEEeccccchHHHHHhccccC
Confidence 333344445578999999999999988877763
No 248
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=68.84 E-value=9.5 Score=38.20 Aligned_cols=33 Identities=18% Similarity=0.302 Sum_probs=24.7
Q ss_pred HHHHHHHhCCCCEEEEEeChHHHHHHHHHHhCC
Q 007536 484 LRDFTVEVVGEPVHLIGNSIGGYFVAIVACLWP 516 (599)
Q Consensus 484 l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p 516 (599)
+..+.+.....++.|-|||+||++|..+..++.
T Consensus 266 ~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~fg 298 (425)
T COG5153 266 LGAVRRIYPDARIWLTGHSLGGAIASLLGIRFG 298 (425)
T ss_pred HHHHHHhCCCceEEEeccccchHHHHHhccccC
Confidence 333344445578999999999999988877763
No 249
>cd01987 USP_OKCHK USP domain is located between the N-terminal sensor domain and C-terminal catalytic domain of this Osmosensitive K+ channel histidine kinase family. The family of KdpD sensor kinase proteins regulates the kdpFABC operon responsible for potassium transport. The USP domain is homologous to the universal stress protein Usp Usp is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents. Usp enhances the rate of cell survival during prolonged exposure to such conditions, and may provide a general "stress endurance" activity.
Probab=68.05 E-value=48 Score=28.40 Aligned_cols=78 Identities=17% Similarity=0.143 Sum_probs=50.7
Q ss_pred CCHHHHHHHhC-----CCeEEEEEeCCcccccCCHhHHHHHHHHHHHHHHHHHhcCCcEEEE-EcCHHHHHHHHHHHhCC
Q 007536 59 DHLGLVAASKY-----QAVVPLYVFDHRILSRYSNEMLELVIFALEDLRKSLKEQGSDLMIR-FGRVENVIRELVEEVKA 132 (599)
Q Consensus 59 DN~aL~~A~~~-----~~v~~vfi~d~~~~~~~~~~r~~Fl~~sL~~L~~~L~~~g~~L~v~-~g~~~~~l~~l~~~~~~ 132 (599)
...+|..|+.. .++..+++.++.... ...... +-|..+.+.+++.++...+. .|++.+.+.+.++++++
T Consensus 12 s~~al~~a~~la~~~~~~l~ll~v~~~~~~~-~~~~~~----~~l~~~~~~~~~~~~~~~~~~~~~~~~~I~~~~~~~~~ 86 (124)
T cd01987 12 AERLIRRAARLADRLKAPWYVVYVETPRLNR-LSEAER----RRLAEALRLAEELGAEVVTLPGDDVAEAIVEFAREHNV 86 (124)
T ss_pred hHHHHHHHHHHHHHhCCCEEEEEEecCcccc-CCHHHH----HHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHHcCC
Confidence 34566666532 578899998865321 112222 33455555666677776554 45788999999999999
Q ss_pred cEEEEcccc
Q 007536 133 TSVFAEEEV 141 (599)
Q Consensus 133 ~~v~~~~~~ 141 (599)
+.|+.-..-
T Consensus 87 dllviG~~~ 95 (124)
T cd01987 87 TQIVVGKSR 95 (124)
T ss_pred CEEEeCCCC
Confidence 988776553
No 250
>cd01988 Na_H_Antiporter_C The C-terminal domain of a subfamily of Na+ /H+ antiporter existed in bacteria and archea . Na+/H+ exchange proteins eject protons from cells, effectively eliminating excess acid from actively metabolising cells. Na+ /H+ exchange activity is also crucial for the regulation of cell volume, and for the reabsorption of NaCl across renal, intestinal, and other epithelia. These antiports exchange Na+ for H+ in an electroneutral manner, and this activity is carried out by a family of Na+ /H+ exchangers, or NHEs, which are known to be present in both prokaryotic and eukaryotic cells. These exchangers are highly-regulated (glyco)phosphoproteins, which, based on their primary structure, appear to contain 10-12 membrane-spanning regions (M) at the N-terminus and a large cytoplasmic region at the C-terminus. The transmembrane regions M3-M12 share identity wit h other members of the family. The M6 and M7 regions are highly conserved. Thus, this is thought to be the regio
Probab=66.45 E-value=69 Score=27.47 Aligned_cols=82 Identities=13% Similarity=-0.006 Sum_probs=53.9
Q ss_pred CHHHHHHHh----C-CCeEEEEEeCCcccccC--CHhHHHHHHHHHHHHHHHHHhcCCcEEEE---EcCHHHHHHHHHHH
Q 007536 60 HLGLVAASK----Y-QAVVPLYVFDHRILSRY--SNEMLELVIFALEDLRKSLKEQGSDLMIR---FGRVENVIRELVEE 129 (599)
Q Consensus 60 N~aL~~A~~----~-~~v~~vfi~d~~~~~~~--~~~r~~Fl~~sL~~L~~~L~~~g~~L~v~---~g~~~~~l~~l~~~ 129 (599)
..+|.+|.. . .++..++++++...... ......-..+.+..+.+.+++.|++.... .|++.+.+.+++++
T Consensus 13 ~~~l~~a~~la~~~~~~v~ll~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~I~~~a~~ 92 (132)
T cd01988 13 RDLLELAAALARAQNGEIIPLNVIEVPNHSSPSQLEVNVQRARKLLRQAERIAASLGVPVHTIIRIDHDIASGILRTAKE 92 (132)
T ss_pred HHHHHHHHHHhhcCCCeEEEEEEEecCCCCCcchhHHHHHHHHHHHHHHHHHhhhcCCceEEEEEecCCHHHHHHHHHHh
Confidence 346666653 2 57889999886432110 11222334466677777777888875433 47899999999999
Q ss_pred hCCcEEEEcccc
Q 007536 130 VKATSVFAEEEV 141 (599)
Q Consensus 130 ~~~~~v~~~~~~ 141 (599)
++++.|++-..-
T Consensus 93 ~~~dlIV~G~~~ 104 (132)
T cd01988 93 RQADLIIMGWHG 104 (132)
T ss_pred cCCCEEEEecCC
Confidence 999988876654
No 251
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=65.71 E-value=1.1e+02 Score=32.24 Aligned_cols=86 Identities=19% Similarity=0.170 Sum_probs=57.7
Q ss_pred CeEEEECCCCC-------ChHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCEEEEE
Q 007536 428 PAILLVHGFGA-------FLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNIVYTELMWSELLRDFTVEVVGEPVHLIG 500 (599)
Q Consensus 428 p~vlllHG~~~-------~~~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~lvG 500 (599)
..||++||... +.+.|..+++.+.++|+ +-.+|.--.|.-++ ++.-+..+..++... +-.+|.
T Consensus 172 ~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~l-ip~~D~AYQGF~~G------leeDa~~lR~~a~~~---~~~lva 241 (396)
T COG1448 172 GSVVLLHGCCHNPTGIDPTEEQWQELADLIKERGL-IPFFDIAYQGFADG------LEEDAYALRLFAEVG---PELLVA 241 (396)
T ss_pred CCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCC-eeeeehhhhhhccc------hHHHHHHHHHHHHhC---CcEEEE
Confidence 45999998743 45789999999998754 55667664443332 333444455554432 337888
Q ss_pred eChHHHHHHHHHHhCCcccceEEEEcCC
Q 007536 501 NSIGGYFVAIVACLWPAVVKSVVLINSA 528 (599)
Q Consensus 501 hS~Gg~ia~~~a~~~p~~v~~lvli~~~ 528 (599)
.|..-..+ .|.+||.++.+++..
T Consensus 242 ~S~SKnfg-----LYgERVGa~~vva~~ 264 (396)
T COG1448 242 SSFSKNFG-----LYGERVGALSVVAED 264 (396)
T ss_pred ehhhhhhh-----hhhhccceeEEEeCC
Confidence 88876555 577999999999763
No 252
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=65.51 E-value=13 Score=37.96 Aligned_cols=99 Identities=18% Similarity=0.106 Sum_probs=65.5
Q ss_pred CCeEEEECCCCCChH----HHHHHH-----------HHHHhCCCEEEEEcCC-CCCCCCCCCC-CC--CHHHHHHHHHHH
Q 007536 427 GPAILLVHGFGAFLE----HYRDNI-----------YDIADGGNRVWAITLL-GFGRSEKPNI-VY--TELMWSELLRDF 487 (599)
Q Consensus 427 ~p~vlllHG~~~~~~----~w~~~~-----------~~l~~~g~~vi~~D~~-G~G~S~~~~~-~~--~~~~~~~~l~~~ 487 (599)
.|..+.+.|.++.+. .|+.+- ..|.. -.++.+|-| |.|.|-.... .| +..+.+.|+.++
T Consensus 31 ~pl~lwlqGgpGaSstG~GNFeE~GPl~~~~~~r~~TWlk~--adllfvDnPVGaGfSyVdg~~~Y~~~~~qia~Dl~~l 108 (414)
T KOG1283|consen 31 RPLALWLQGGPGASSTGFGNFEELGPLDLDGSPRDWTWLKD--ADLLFVDNPVGAGFSYVDGSSAYTTNNKQIALDLVEL 108 (414)
T ss_pred CCeeEEecCCCCCCCcCccchhhcCCcccCCCcCCchhhhh--ccEEEecCCCcCceeeecCcccccccHHHHHHHHHHH
Confidence 677899999866442 243321 12322 568888888 8888854322 23 466778888888
Q ss_pred HHHhC-------CCCEEEEEeChHHHHHHHHHHhCC---------cccceEEEEcC
Q 007536 488 TVEVV-------GEPVHLIGNSIGGYFVAIVACLWP---------AVVKSVVLINS 527 (599)
Q Consensus 488 l~~l~-------~~~~~lvGhS~Gg~ia~~~a~~~p---------~~v~~lvli~~ 527 (599)
++.+- ..|++|+.-|.||-+|..++...- ....+++|=++
T Consensus 109 lk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk~G~i~~nf~~VaLGDS 164 (414)
T KOG1283|consen 109 LKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIKRGEIKLNFIGVALGDS 164 (414)
T ss_pred HHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHhcCceeecceeEEccCc
Confidence 77542 368999999999999998876422 23566666554
No 253
>PRK15005 universal stress protein F; Provisional
Probab=64.98 E-value=65 Score=28.36 Aligned_cols=80 Identities=16% Similarity=0.095 Sum_probs=48.2
Q ss_pred HHHHHHHh----C-CCeEEEEEeCCccc-c--cC-----CHhH---HHHHHHHHHHHHHHHHhcC--CcEEEEEcCHHHH
Q 007536 61 LGLVAASK----Y-QAVVPLYVFDHRIL-S--RY-----SNEM---LELVIFALEDLRKSLKEQG--SDLMIRFGRVENV 122 (599)
Q Consensus 61 ~aL~~A~~----~-~~v~~vfi~d~~~~-~--~~-----~~~r---~~Fl~~sL~~L~~~L~~~g--~~L~v~~g~~~~~ 122 (599)
.||.+|++ . .++..++++++... . .. .... ..-..+.|.++.+++...+ +..++..|+|.+.
T Consensus 19 ~a~~~a~~la~~~~~~l~ll~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~v~~G~p~~~ 98 (144)
T PRK15005 19 RVISHVEAEAKIDDAEVHFLTVIPSLPYYASLGLAYSAELPAMDDLKAEAKSQLEEIIKKFKLPTDRVHVHVEEGSPKDR 98 (144)
T ss_pred HHHHHHHHHHhccCCeEEEEEEEccCcccccccccccccchHHHHHHHHHHHHHHHHHHHhCCCCCceEEEEeCCCHHHH
Confidence 46666653 2 57888888875311 0 00 0111 1112234444444444334 3577889999999
Q ss_pred HHHHHHHhCCcEEEEccc
Q 007536 123 IRELVEEVKATSVFAEEE 140 (599)
Q Consensus 123 l~~l~~~~~~~~v~~~~~ 140 (599)
+.+.+++.+++-|+.-..
T Consensus 99 I~~~a~~~~~DLIV~Gs~ 116 (144)
T PRK15005 99 ILELAKKIPADMIIIASH 116 (144)
T ss_pred HHHHHHHcCCCEEEEeCC
Confidence 999999999998887654
No 254
>cd00293 USP_Like Usp: Universal stress protein family. The universal stress protein Usp is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents. Usp enhances the rate of cell survival during prolonged exposure to such conditions, and may provide a general "stress endurance" activity. The crystal structure of Haemophilus influenzae Usp reveals an alpha/beta fold similar to that of the Methanococcus jannaschii MJ0577 protein, which binds ATP, athough Usp lacks ATP-binding activity.
Probab=64.44 E-value=66 Score=27.02 Aligned_cols=71 Identities=27% Similarity=0.255 Sum_probs=47.9
Q ss_pred CCeEEEEEeCCccccc--CCHhHHHHHHHHHHHHHHHHHhcCCcE--EEEEcCHHHHHHHHHHHhCCcEEEEccc
Q 007536 70 QAVVPLYVFDHRILSR--YSNEMLELVIFALEDLRKSLKEQGSDL--MIRFGRVENVIRELVEEVKATSVFAEEE 140 (599)
Q Consensus 70 ~~v~~vfi~d~~~~~~--~~~~r~~Fl~~sL~~L~~~L~~~g~~L--~v~~g~~~~~l~~l~~~~~~~~v~~~~~ 140 (599)
.++.++++.++..... .......-..+.|.++...+...|+++ .+..|++.+.+.+.+++.+++.|+....
T Consensus 28 ~~i~~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~dlvvig~~ 102 (130)
T cd00293 28 AELVLLHVVDPPPSSAAELAELLEEEARALLEALREALAEAGVKVETVVLEGDPAEAILEAAEELGADLIVMGSR 102 (130)
T ss_pred CEEEEEEEecCCCCcchhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHcCCCEEEEcCC
Confidence 5788999987643210 011222334466677776666677775 4557888899999999999998887654
No 255
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=64.33 E-value=20 Score=37.23 Aligned_cols=75 Identities=16% Similarity=0.172 Sum_probs=47.7
Q ss_pred CEEEEEcCC-CCCCCCCCCC-CC-CHHHHHHHHHHHHHH----h---CCCCEEEEEeChHHHHHHHHHHh----C-----
Q 007536 455 NRVWAITLL-GFGRSEKPNI-VY-TELMWSELLRDFTVE----V---VGEPVHLIGNSIGGYFVAIVACL----W----- 515 (599)
Q Consensus 455 ~~vi~~D~~-G~G~S~~~~~-~~-~~~~~~~~l~~~l~~----l---~~~~~~lvGhS~Gg~ia~~~a~~----~----- 515 (599)
.+++-+|.| |.|.|-.... .+ +-+..++++..+|.. . ...+++|.|-|.||..+-.+|.. .
T Consensus 2 aNvLfiDqPvGvGfSy~~~~~~~~~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n~~~~~ 81 (319)
T PLN02213 2 ANIIFLDQPVGSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCE 81 (319)
T ss_pred ccEEEecCCCCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhcccccC
Confidence 368999999 8888854321 22 212223444444433 2 34789999999999987777663 1
Q ss_pred -CcccceEEEEcCCC
Q 007536 516 -PAVVKSVVLINSAG 529 (599)
Q Consensus 516 -p~~v~~lvli~~~~ 529 (599)
+-.++|+++-++..
T Consensus 82 ~~inLkGi~IGNg~t 96 (319)
T PLN02213 82 PPINLQGYMLGNPVT 96 (319)
T ss_pred CceeeeEEEeCCCCC
Confidence 12577888887643
No 256
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=62.48 E-value=52 Score=36.48 Aligned_cols=100 Identities=17% Similarity=0.076 Sum_probs=53.3
Q ss_pred CeEEEECCCCC---ChHHHHHHHHHHHh-CCCEEEEEcCCCCCCCCCCCCCCCHHHH---HHHHHHHHHHhC--CCCEEE
Q 007536 428 PAILLVHGFGA---FLEHYRDNIYDIAD-GGNRVWAITLLGFGRSEKPNIVYTELMW---SELLRDFTVEVV--GEPVHL 498 (599)
Q Consensus 428 p~vlllHG~~~---~~~~w~~~~~~l~~-~g~~vi~~D~~G~G~S~~~~~~~~~~~~---~~~l~~~l~~l~--~~~~~l 498 (599)
..|+-+||.|- ++..-....+..+. -|+.|+.+|+.=--....| ..++.. --++..-...++ .++|++
T Consensus 397 sli~HcHGGGfVAqsSkSHE~YLr~Wa~aL~cPiiSVdYSLAPEaPFP---RaleEv~fAYcW~inn~allG~TgEriv~ 473 (880)
T KOG4388|consen 397 SLIVHCHGGGFVAQSSKSHEPYLRSWAQALGCPIISVDYSLAPEAPFP---RALEEVFFAYCWAINNCALLGSTGERIVL 473 (880)
T ss_pred eEEEEecCCceeeeccccccHHHHHHHHHhCCCeEEeeeccCCCCCCC---cHHHHHHHHHHHHhcCHHHhCcccceEEE
Confidence 35778899863 33333333333222 2788999997522222111 122211 112222223333 389999
Q ss_pred EEeChHHHHHHHHHHh---CCcc-cceEEEEcCCCC
Q 007536 499 IGNSIGGYFVAIVACL---WPAV-VKSVVLINSAGN 530 (599)
Q Consensus 499 vGhS~Gg~ia~~~a~~---~p~~-v~~lvli~~~~~ 530 (599)
+|-|.||.+.+..|.+ +.-| -.|+++.-++..
T Consensus 474 aGDSAGgNL~~~VaLr~i~~gvRvPDGl~laY~ptl 509 (880)
T KOG4388|consen 474 AGDSAGGNLCFTVALRAIAYGVRVPDGLMLAYPPTL 509 (880)
T ss_pred eccCCCcceeehhHHHHHHhCCCCCCceEEecChhh
Confidence 9999999877666543 2222 367777766543
No 257
>PRK10116 universal stress protein UspC; Provisional
Probab=61.86 E-value=1.1e+02 Score=26.77 Aligned_cols=84 Identities=11% Similarity=0.092 Sum_probs=49.9
Q ss_pred CCCHHHHHHHhC-----CCeEEEEEeCCcccc-cCC-----HhHHHHHHHHHHHHHHHHHhcCCc---EEEEEcCHHHHH
Q 007536 58 DDHLGLVAASKY-----QAVVPLYVFDHRILS-RYS-----NEMLELVIFALEDLRKSLKEQGSD---LMIRFGRVENVI 123 (599)
Q Consensus 58 ~DN~aL~~A~~~-----~~v~~vfi~d~~~~~-~~~-----~~r~~Fl~~sL~~L~~~L~~~g~~---L~v~~g~~~~~l 123 (599)
+.+.+|..|+.. .++..++++++.... ... ..+....-+....|++...+.|++ .++..|++.+.+
T Consensus 15 ~s~~al~~A~~lA~~~~a~l~ll~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~~~~~I 94 (142)
T PRK10116 15 ESQQLLAKAVSIARPVNGKISLITLASDPEMYNQFAAPMLEDLRSVMQEETQSFLDKLIQDADYPIEKTFIAYGELSEHI 94 (142)
T ss_pred chHHHHHHHHHHHHHhCCEEEEEEEccCcccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEecCCHHHHH
Confidence 446888888632 477788887653211 011 111111112222333333455653 466689999999
Q ss_pred HHHHHHhCCcEEEEcccc
Q 007536 124 RELVEEVKATSVFAEEEV 141 (599)
Q Consensus 124 ~~l~~~~~~~~v~~~~~~ 141 (599)
.+.+++.+++-|+....-
T Consensus 95 ~~~a~~~~~DLiV~g~~~ 112 (142)
T PRK10116 95 LEVCRKHHFDLVICGNHN 112 (142)
T ss_pred HHHHHHhCCCEEEEcCCc
Confidence 999999999998886554
No 258
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=58.79 E-value=33 Score=37.31 Aligned_cols=97 Identities=14% Similarity=0.068 Sum_probs=61.6
Q ss_pred CCEE-EEEEEcCCCCC-eEEEECCCCCChHHHH--HHHHHHHhCCCE-EEEEcCCCCCCCCCCCC-CCCHHHHHHHHHHH
Q 007536 414 NGYQ-IQYTVAGKEGP-AILLVHGFGAFLEHYR--DNIYDIADGGNR-VWAITLLGFGRSEKPNI-VYTELMWSELLRDF 487 (599)
Q Consensus 414 ~g~~-l~y~~~g~~~p-~vlllHG~~~~~~~w~--~~~~~l~~~g~~-vi~~D~~G~G~S~~~~~-~~~~~~~~~~l~~~ 487 (599)
.+.. ++|...|+-+| ..|...|+-. .+-+. ..+..| |.. .+.=|.|=-|.+-.-.. .| -+...+.|.+.
T Consensus 274 ~reEi~yYFnPGD~KPPL~VYFSGyR~-aEGFEgy~MMk~L---g~PfLL~~DpRleGGaFYlGs~ey-E~~I~~~I~~~ 348 (511)
T TIGR03712 274 KRQEFIYYFNPGDFKPPLNVYFSGYRP-AEGFEGYFMMKRL---GAPFLLIGDPRLEGGAFYLGSDEY-EQGIINVIQEK 348 (511)
T ss_pred CCCeeEEecCCcCCCCCeEEeeccCcc-cCcchhHHHHHhc---CCCeEEeeccccccceeeeCcHHH-HHHHHHHHHHH
Confidence 3444 45566665455 5689999844 22222 234444 333 44447776666543222 22 34566777788
Q ss_pred HHHhCC--CCEEEEEeChHHHHHHHHHHhC
Q 007536 488 TVEVVG--EPVHLIGNSIGGYFVAIVACLW 515 (599)
Q Consensus 488 l~~l~~--~~~~lvGhS~Gg~ia~~~a~~~ 515 (599)
|+.|+. +.++|-|-|||..-|+.+++..
T Consensus 349 L~~LgF~~~qLILSGlSMGTfgAlYYga~l 378 (511)
T TIGR03712 349 LDYLGFDHDQLILSGLSMGTFGALYYGAKL 378 (511)
T ss_pred HHHhCCCHHHeeeccccccchhhhhhcccC
Confidence 888887 5699999999999999998874
No 259
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=58.45 E-value=62 Score=35.59 Aligned_cols=81 Identities=12% Similarity=0.042 Sum_probs=53.8
Q ss_pred HHHHHhCCCEEEEEcCCCCCCCCC---CCCCCCHHHH-----------HHHHHHHHHHhC---CCCEEEEEeChHHHHHH
Q 007536 447 IYDIADGGNRVWAITLLGFGRSEK---PNIVYTELMW-----------SELLRDFTVEVV---GEPVHLIGNSIGGYFVA 509 (599)
Q Consensus 447 ~~~l~~~g~~vi~~D~~G~G~S~~---~~~~~~~~~~-----------~~~l~~~l~~l~---~~~~~lvGhS~Gg~ia~ 509 (599)
...+ .+||.++.=|- ||..+.. .....+.+.+ +..-.++++..- .+.-...|.|-||--++
T Consensus 53 ~~~~-~~G~A~~~TD~-Gh~~~~~~~~~~~~~n~~~~~dfa~ra~h~~~~~aK~l~~~~Yg~~p~~sY~~GcS~GGRqgl 130 (474)
T PF07519_consen 53 ATAL-ARGYATASTDS-GHQGSAGSDDASFGNNPEALLDFAYRALHETTVVAKALIEAFYGKAPKYSYFSGCSTGGRQGL 130 (474)
T ss_pred chhh-hcCeEEEEecC-CCCCCcccccccccCCHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCceEEEEeCCCcchHH
Confidence 3344 45999999886 5654432 1112233322 222233344332 25688999999999999
Q ss_pred HHHHhCCcccceEEEEcCCC
Q 007536 510 IVACLWPAVVKSVVLINSAG 529 (599)
Q Consensus 510 ~~a~~~p~~v~~lvli~~~~ 529 (599)
..|.+||+...|+|.-+|+.
T Consensus 131 ~~AQryP~dfDGIlAgaPA~ 150 (474)
T PF07519_consen 131 MAAQRYPEDFDGILAGAPAI 150 (474)
T ss_pred HHHHhChhhcCeEEeCCchH
Confidence 99999999999999988864
No 260
>cd01714 ETF_beta The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.
Probab=58.06 E-value=44 Score=32.12 Aligned_cols=73 Identities=16% Similarity=0.116 Sum_probs=52.4
Q ss_pred HHHHHHhCCC-EEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCEEEEEeCh----HHHHHHHHHHhCC-ccc
Q 007536 446 NIYDIADGGN-RVWAITLLGFGRSEKPNIVYTELMWSELLRDFTVEVVGEPVHLIGNSI----GGYFVAIVACLWP-AVV 519 (599)
Q Consensus 446 ~~~~l~~~g~-~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~lvGhS~----Gg~ia~~~a~~~p-~~v 519 (599)
..+.+...|. +|+..|.++.. .|+.+.+++.+.+++++.+ -.++|+|||. |..++..+|.+-. ..+
T Consensus 68 ~~~~l~~~G~d~V~~~~~~~~~-------~~~~e~~a~al~~~i~~~~-p~lVL~~~t~~~~~grdlaprlAarLga~lv 139 (202)
T cd01714 68 ALREALAMGADRAILVSDRAFA-------GADTLATAKALAAAIKKIG-VDLILTGKQSIDGDTGQVGPLLAELLGWPQI 139 (202)
T ss_pred HHHHHHHcCCCEEEEEeccccc-------CCChHHHHHHHHHHHHHhC-CCEEEEcCCcccCCcCcHHHHHHHHhCCCcc
Confidence 3444555565 78888766443 4677888999999888766 6799999998 8888888887632 356
Q ss_pred ceEEEEc
Q 007536 520 KSVVLIN 526 (599)
Q Consensus 520 ~~lvli~ 526 (599)
..++-+.
T Consensus 140 sdv~~l~ 146 (202)
T cd01714 140 TYVSKIE 146 (202)
T ss_pred ceEEEEE
Confidence 6666654
No 261
>PF08259 Periviscerokin: Periviscerokinin family; InterPro: IPR013231 Perviscerokinin neuropeptides are found in the abdominal perisympathetic organs of insects. They mediate visceral muscle contractile activity (myotropic activity). CAPA, which are in the periviscerokinin and pyrokinin peptide families, has potential medical importance. This is due to its myotropic effects on, for example, heart muscles and due to its occurrence in the Ixodoidea (ticks), which are important vectors in the transmission of many animal diseases []. These peptides also have a strong diuretic or anti-diuretic effect, suggesting they have significant medical implications [].
Probab=56.26 E-value=4.5 Score=19.48 Aligned_cols=7 Identities=71% Similarity=1.341 Sum_probs=5.9
Q ss_pred ccccccc
Q 007536 2 ALISFPR 8 (599)
Q Consensus 2 ~~~~~~~ 8 (599)
.||+|||
T Consensus 4 GlI~fpR 10 (11)
T PF08259_consen 4 GLIPFPR 10 (11)
T ss_pred cccccCC
Confidence 5899998
No 262
>COG2102 Predicted ATPases of PP-loop superfamily [General function prediction only]
Probab=54.52 E-value=71 Score=31.07 Aligned_cols=92 Identities=17% Similarity=0.084 Sum_probs=61.5
Q ss_pred CHHHHHHHhC-CCeEEEEEeCCcccccCCHhHHHHHHHHHHHHHHHHHhcCCcEEEEE--c---CHHHHHHHHHHHhCCc
Q 007536 60 HLGLVAASKY-QAVVPLYVFDHRILSRYSNEMLELVIFALEDLRKSLKEQGSDLMIRF--G---RVENVIRELVEEVKAT 133 (599)
Q Consensus 60 N~aL~~A~~~-~~v~~vfi~d~~~~~~~~~~r~~Fl~~sL~~L~~~L~~~g~~L~v~~--g---~~~~~l~~l~~~~~~~ 133 (599)
|-||+.|.+. -.|..+.++-|.... .+-|-.-.+.-...+-+..|++++... | +-.+.+.++.+.++++
T Consensus 14 ~~Al~~a~~~G~eV~~Ll~~~p~~~d-----S~m~H~~n~~~~~~~Ae~~gi~l~~~~~~g~~e~eve~L~~~l~~l~~d 88 (223)
T COG2102 14 FYALYLALEEGHEVVYLLTVKPENGD-----SYMFHTPNLELAELQAEAMGIPLVTFDTSGEEEREVEELKEALRRLKVD 88 (223)
T ss_pred HHHHHHHHHcCCeeEEEEEEecCCCC-----eeeeeccchHHHHHHHHhcCCceEEEecCccchhhHHHHHHHHHhCccc
Confidence 6789999977 577777777765331 111222334444444567799987764 3 2455666777888999
Q ss_pred EEEEccccChhHHHHHHHHHHHH
Q 007536 134 SVFAEEEVEYHLRQMMAIVDETL 156 (599)
Q Consensus 134 ~v~~~~~~~~~~~~~d~~v~~~l 156 (599)
.|++-.-+..+.+.|-+++.+.+
T Consensus 89 ~iv~GaI~s~yqk~rve~lc~~l 111 (223)
T COG2102 89 GIVAGAIASEYQKERVERLCEEL 111 (223)
T ss_pred EEEEchhhhHHHHHHHHHHHHHh
Confidence 99999988888888766665543
No 263
>PF01902 ATP_bind_4: ATP-binding region; InterPro: IPR002761 This domain is about 200 amino acids long with a strongly conserved motif SGGKD at the N-terminal. The structure of Q8U2K6 from SWISSPROT from Pyrococcus furiosus has been resolved to 2.7A and is suggested to be a putative N-type pytophosphatase. In some members of the family e.g. Q12429 from SWISSPROT, this domain is associated with IPR006175 from INTERPRO, another domain of unknown function. Proteins with this uncharacterised domain include two apparent ortholog families in the archaea, one of which is universal among the first four completed archaeal genomes. The domain comprises the full length of the archaeal proteins and the first third of fungal proteins.; PDB: 3RK0_A 3RK1_A 3RJZ_A 2D13_D.
Probab=47.94 E-value=24 Score=34.41 Aligned_cols=91 Identities=18% Similarity=0.138 Sum_probs=48.4
Q ss_pred HHHHHHHhCCCeEEEEEeCCcccccCCHhHHHHHHHH--HHHHHHHHHhcCCcEEEEE-----cCHHHHHHHHHHHhCCc
Q 007536 61 LGLVAASKYQAVVPLYVFDHRILSRYSNEMLELVIFA--LEDLRKSLKEQGSDLMIRF-----GRVENVIRELVEEVKAT 133 (599)
Q Consensus 61 ~aL~~A~~~~~v~~vfi~d~~~~~~~~~~r~~Fl~~s--L~~L~~~L~~~g~~L~v~~-----g~~~~~l~~l~~~~~~~ 133 (599)
-||+.|.+..+|..+..+-|.... + +++++ +.-++.+-+.+|+||+... .+..+.+.+..++.+++
T Consensus 15 lAl~~a~~~~~v~~L~t~~~~~~~-----s--~~~H~~~~~~~~~qA~algipl~~~~~~g~~~~~~~~l~~~l~~~~v~ 87 (218)
T PF01902_consen 15 LALYRALRQHEVVCLLTMVPEEED-----S--YMFHGVNIELIEAQAEALGIPLIEIPTSGDEEDYVEDLKEALKELKVE 87 (218)
T ss_dssp HHHHHHHHT-EEEEEEEEEESTTT--------SSS-STTGTCHHHHHHHHT--EEEEEE---CCCHHHHHHHHHCTC--S
T ss_pred HHHHHHHHhCCccEEEEeccCCCC-----c--ccccccCHHHHHHHHHHCCCCEEEEEccCccchhhHHHHHHHHHcCCC
Confidence 478888876455555544443211 1 22222 3345555577899998764 34455666777788999
Q ss_pred EEEEccccChhHHHHHHHHHHHHHhccc
Q 007536 134 SVFAEEEVEYHLRQMMAIVDETLAKVSL 161 (599)
Q Consensus 134 ~v~~~~~~~~~~~~~d~~v~~~l~~~gi 161 (599)
+|++-.-...+.+.+.+++ |.+.|+
T Consensus 88 ~vv~GdI~~~~~r~~~e~v---c~~lGl 112 (218)
T PF01902_consen 88 AVVFGDIDSEYQRNWVERV---CERLGL 112 (218)
T ss_dssp EEE--TTS-HHHHHHHHHH---HHHCT-
T ss_pred EEEECcCCcHHHHHHHHHH---HHHcCC
Confidence 9988887766666665555 555554
No 264
>TIGR02765 crypto_DASH cryptochrome, DASH family. Photolyases and cryptochromes are related flavoproteins. Photolyases harness the energy of blue light to repair DNA damage by removing pyrimidine dimers. Cryptochromes do not repair DNA and are presumed to act instead in some other (possibly unknown) process such as entraining circadian rhythms. This model describes the cryptochrome DASH subfamily, one of at least five major subfamilies, which is found in plants, animals, marine bacteria, etc. Members of this family bind both folate and FAD. They may show weak photolyase activity in vitro but have not been shown to affect DNA repair in vivo. Rather, DASH family cryptochromes have been shown to bind RNA (Vibrio cholerae VC1814), or DNA, and seem likely to act in light-responsive regulatory processes.
Probab=47.27 E-value=9.7 Score=41.27 Aligned_cols=59 Identities=14% Similarity=0.064 Sum_probs=39.5
Q ss_pred hhcccchhhHHHHHhhhcccccccCCCCCCCCccccCCCccccCCCCccccChHHHHHHHHHHHHhhccCccchHHHHHH
Q 007536 242 LINNMSAETILTDKLSKLGKRSKRNLNNQHSPRKRLDKSFFVTDKGNTVGGGTNAVLNALQAYLRYLEGTVRDDWQELQE 321 (599)
Q Consensus 242 ~~g~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gGe~~A~~~L~~fl~~~~~~~~~~Y~~~rn 321 (599)
.+|+.+|+++|++|++.+.+..|...++.+.. ..|+ .+|+.||++|+.+...-|.+.+.
T Consensus 208 ~gGe~~A~~~L~~Fl~~~~l~~Y~~~R~~~~~-----------------~~~t----S~LSpyL~~G~iS~r~v~~~~~~ 266 (429)
T TIGR02765 208 VGGETAGLARLKEYFWSKDLKSYKETRNGMLG-----------------PDYS----TKFSPWLALGCVSPRQIYEELQR 266 (429)
T ss_pred CchHHHHHHHHHHHHhhccHhhhhhccCcccC-----------------CCCc----CccCHHHhCCcccHHHHHHHHHH
Confidence 45899999999999976566666555543211 1122 26888888888877777777654
No 265
>PRK12467 peptide synthase; Provisional
Probab=46.65 E-value=95 Score=43.80 Aligned_cols=99 Identities=17% Similarity=0.079 Sum_probs=68.3
Q ss_pred CCeEEEECCCCCChHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC-CCCEEEEEeChHH
Q 007536 427 GPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNIVYTELMWSELLRDFTVEVV-GEPVHLIGNSIGG 505 (599)
Q Consensus 427 ~p~vlllHG~~~~~~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~-~~~~~lvGhS~Gg 505 (599)
.+.|++.|...++...+..+...+.. +..++.+..++.-.-.. ...+++.++....+.+.... ..+..+.|+|+||
T Consensus 3692 ~~~l~~~h~~~r~~~~~~~l~~~l~~-~~~~~~l~~~~~~~d~~--~~~~~~~~~~~y~~~~~~~~~~~p~~l~g~s~g~ 3768 (3956)
T PRK12467 3692 FPALFCRHEGLGTVFDYEPLAVILEG-DRHVLGLTCRHLLDDGW--QDTSLQAMAVQYADYILWQQAKGPYGLLGWSLGG 3768 (3956)
T ss_pred ccceeeechhhcchhhhHHHHHHhCC-CCcEEEEeccccccccC--CccchHHHHHHHHHHHHHhccCCCeeeeeeecch
Confidence 35699999998887777777777755 47889888776643222 12345555555555555443 4689999999999
Q ss_pred HHHHHHHHh---CCcccceEEEEcCC
Q 007536 506 YFVAIVACL---WPAVVKSVVLINSA 528 (599)
Q Consensus 506 ~ia~~~a~~---~p~~v~~lvli~~~ 528 (599)
.++..++.. ..+.+.-+.+++..
T Consensus 3769 ~~a~~~~~~l~~~g~~~~~~~~~~~~ 3794 (3956)
T PRK12467 3769 TLARLVAELLEREGESEAFLGLFDNT 3794 (3956)
T ss_pred HHHHHHHHHHHHcCCceeEEEEEecc
Confidence 999887764 44566666666543
No 266
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=44.85 E-value=46 Score=31.41 Aligned_cols=45 Identities=11% Similarity=0.183 Sum_probs=38.7
Q ss_pred HHHHHHHHHHHHHhcCCcEEEEEcCHHHHHHHHHHHhCCcEEEEc
Q 007536 94 VIFALEDLRKSLKEQGSDLMIRFGRVENVIRELVEEVKATSVFAE 138 (599)
Q Consensus 94 l~~sL~~L~~~L~~~g~~L~v~~g~~~~~l~~l~~~~~~~~v~~~ 138 (599)
+..++.++-+.|++.|.++.|..+.+...+..+++.++++.++.+
T Consensus 88 ~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~~~~ 132 (202)
T TIGR01490 88 LYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNAIGT 132 (202)
T ss_pred ccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcceEec
Confidence 456777777888999999999999999999999999999887765
No 267
>COG0415 PhrB Deoxyribodipyrimidine photolyase [DNA replication, recombination, and repair]
Probab=44.26 E-value=10 Score=41.21 Aligned_cols=81 Identities=17% Similarity=0.073 Sum_probs=54.4
Q ss_pred hcccchhhHHHHHhhhcccccccCCCCCCCCccccCCCccccCCCCccccChHHHHHHHHHHHHhhccCccchHHHHHHh
Q 007536 243 INNMSAETILTDKLSKLGKRSKRNLNNQHSPRKRLDKSFFVTDKGNTVGGGTNAVLNALQAYLRYLEGTVRDDWQELQEK 322 (599)
Q Consensus 243 ~g~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gGe~~A~~~L~~fl~~~~~~~~~~Y~~~rn~ 322 (599)
+|+++|+.+|.+|++.. +.+|...+|.+. ..|+ .+|+.||.+|+.+...-|.+++..
T Consensus 198 ~Ge~aA~~~l~~F~~~~-l~~Y~~~Rd~p~------------------~~~T----S~LSpyL~~G~IS~r~v~~~~~~~ 254 (461)
T COG0415 198 GGEKAALARLQDFLAEG-LDDYERTRDFPA------------------LDGT----SRLSPYLAFGVISPREVYAALLAA 254 (461)
T ss_pred chHHHHHHHHHHHHHHH-HHHHHHhcCCcc------------------cccc----cccCHHHHcCCcCHHHHHHHHHHh
Confidence 48899999999999855 777777776532 2233 378899998888888888888754
Q ss_pred hccccCCCCCCcccccccchhccccchhHHHHHH
Q 007536 323 LRNAESRDGASFATLFGPALCLGIISRRGVHYEA 356 (599)
Q Consensus 323 ~r~~~~~~~~~~tS~LSpyL~~G~IS~R~v~~~v 356 (599)
. .. . .-|..-=...|.-|+.|+-+
T Consensus 255 ~------~~--~--~~~~~~~~~eL~WREFy~h~ 278 (461)
T COG0415 255 E------SD--A--REGTAALINELIWREFYQHL 278 (461)
T ss_pred h------hc--c--cchHHHHHHHHHHHHHHHHH
Confidence 2 11 1 22222234466667776665
No 268
>PF00582 Usp: Universal stress protein family; InterPro: IPR006016 The universal stress protein UspA P28242 from SWISSPROT [] is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents. UspA enhances the rate of cell survival during prolonged exposure to such conditions, and may provide a general "stress endurance" activity. The crystal structure of Haemophilus influenzae UspA [] reveals an alpha/beta fold similar to that of the Methanocaldococcus jannaschii (Methanococcus jannaschii) MJ0577 protein, which binds ATP [], though UspA lacks ATP-binding activity.; GO: 0006950 response to stress; PDB: 3DLO_C 3QTB_A 2PFS_A 3TNJ_A 1JMV_D 3FH0_B 3FDX_B 3AB7_A 3AB8_A 2GM3_F ....
Probab=44.03 E-value=1.3e+02 Score=25.52 Aligned_cols=32 Identities=25% Similarity=0.319 Sum_probs=27.0
Q ss_pred CcEEEEEcCHHHHHHHHHHHhCCcEEEEcccc
Q 007536 110 SDLMIRFGRVENVIRELVEEVKATSVFAEEEV 141 (599)
Q Consensus 110 ~~L~v~~g~~~~~l~~l~~~~~~~~v~~~~~~ 141 (599)
....+..|++.+.+.+++++.+++.|+....-
T Consensus 81 ~~~~~~~~~~~~~i~~~~~~~~~dliv~G~~~ 112 (140)
T PF00582_consen 81 IEVVIESGDVADAIIEFAEEHNADLIVMGSRG 112 (140)
T ss_dssp EEEEEEESSHHHHHHHHHHHTTCSEEEEESSS
T ss_pred eEEEEEeeccchhhhhccccccceeEEEeccC
Confidence 34666789999999999999999998887665
No 269
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=42.07 E-value=31 Score=33.43 Aligned_cols=44 Identities=25% Similarity=0.339 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHhcCCcEEEEEcCHHHHHHHHHHHhCCcEEEEcc
Q 007536 96 FALEDLRKSLKEQGSDLMIRFGRVENVIRELVEEVKATSVFAEE 139 (599)
Q Consensus 96 ~sL~~L~~~L~~~g~~L~v~~g~~~~~l~~l~~~~~~~~v~~~~ 139 (599)
.+..+|-+.|++.|....|+.|.+...+..+++.++++.++.|.
T Consensus 80 ~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~ 123 (212)
T COG0560 80 PGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANE 123 (212)
T ss_pred ccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeE
Confidence 34888999999999999999999999999999999999766654
No 270
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=41.59 E-value=1.1e+02 Score=35.28 Aligned_cols=60 Identities=17% Similarity=0.081 Sum_probs=46.1
Q ss_pred HHHHHHHHHHHhcCCcEEEEEcCHHHHHHHHHHHhCCcEEEEccccChhHHHHHHHHHHHHHhcc
Q 007536 96 FALEDLRKSLKEQGSDLMIRFGRVENVIRELVEEVKATSVFAEEEVEYHLRQMMAIVDETLAKVS 160 (599)
Q Consensus 96 ~sL~~L~~~L~~~g~~L~v~~g~~~~~l~~l~~~~~~~~v~~~~~~~~~~~~~d~~v~~~l~~~g 160 (599)
+...+.-++|++.|++.+++.||.......++++.+++.|+.+. .|..+. ++.+.++++|
T Consensus 444 ~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI~~v~A~~--~PedK~---~iV~~lQ~~G 503 (673)
T PRK14010 444 DGLVERFRELREMGIETVMCTGDNELTAATIAKEAGVDRFVAEC--KPEDKI---NVIREEQAKG 503 (673)
T ss_pred HHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCceEEcCC--CHHHHH---HHHHHHHhCC
Confidence 45666667788999999999999999999999999999888654 344443 3455566655
No 271
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=41.22 E-value=51 Score=31.14 Aligned_cols=62 Identities=18% Similarity=0.176 Sum_probs=43.7
Q ss_pred HHHHHHHHHHHHhcCCcEEEEEcCHHHHHHHHHHHhCCcE--EEEccccChhHHHHHHHHHHHHH
Q 007536 95 IFALEDLRKSLKEQGSDLMIRFGRVENVIRELVEEVKATS--VFAEEEVEYHLRQMMAIVDETLA 157 (599)
Q Consensus 95 ~~sL~~L~~~L~~~g~~L~v~~g~~~~~l~~l~~~~~~~~--v~~~~~~~~~~~~~d~~v~~~l~ 157 (599)
...+.++-++|++.|+++.++.|+.......++++.++.. |+......|..+ .-.++.+.|+
T Consensus 129 ~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~~~v~a~~~~kP~~k-~~~~~i~~l~ 192 (215)
T PF00702_consen 129 RPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFDSIVFARVIGKPEPK-IFLRIIKELQ 192 (215)
T ss_dssp HTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCSEEEEESHETTTHHH-HHHHHHHHHT
T ss_pred hhhhhhhhhhhhccCcceeeeeccccccccccccccccccccccccccccccch-hHHHHHHHHh
Confidence 3557777788899999999999999999999999999954 444432123333 2234445555
No 272
>PRK13398 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=39.91 E-value=3.3e+02 Score=27.43 Aligned_cols=93 Identities=17% Similarity=0.128 Sum_probs=56.7
Q ss_pred CCCeEEEECCCCCChHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCEEE-EEeChH
Q 007536 426 EGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNIVYTELMWSELLRDFTVEVVGEPVHL-IGNSIG 504 (599)
Q Consensus 426 ~~p~vlllHG~~~~~~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~l-vGhS~G 504 (599)
.+.||++=-|..++...|...++.+...|-.=+.+=.+|. +..+ .|....+--.....+++...-++.+ ..||.|
T Consensus 133 ~gkPV~lk~G~~~s~~e~~~A~e~i~~~Gn~~i~L~~rG~--~t~~--~Y~~~~vdl~~i~~lk~~~~~pV~~D~sHs~G 208 (266)
T PRK13398 133 TKKPILLKRGMSATLEEWLYAAEYIMSEGNENVVLCERGI--RTFE--TYTRNTLDLAAVAVIKELSHLPIIVDPSHATG 208 (266)
T ss_pred CCCcEEEeCCCCCCHHHHHHHHHHHHhcCCCeEEEEECCC--CCCC--CCCHHHHHHHHHHHHHhccCCCEEEeCCCccc
Confidence 4788999999999999999999999877764445555664 1111 2333322222233344443457777 799998
Q ss_pred -----HHHHHHHHHhCCcccceEEEE
Q 007536 505 -----GYFVAIVACLWPAVVKSVVLI 525 (599)
Q Consensus 505 -----g~ia~~~a~~~p~~v~~lvli 525 (599)
..++....+. .+.|+++-
T Consensus 209 ~~~~v~~~~~aAva~---Ga~Gl~iE 231 (266)
T PRK13398 209 RRELVIPMAKAAIAA---GADGLMIE 231 (266)
T ss_pred chhhHHHHHHHHHHc---CCCEEEEe
Confidence 4444333332 25666654
No 273
>PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=39.39 E-value=1.1e+02 Score=25.28 Aligned_cols=66 Identities=18% Similarity=0.185 Sum_probs=43.9
Q ss_pred HHHHHHHHHhcCCcEEEE---EcCHHH--HHHHHHHHhCCcEEEEccccChhHHHHHHHHHHHHHhcccCCCCceeEee
Q 007536 98 LEDLRKSLKEQGSDLMIR---FGRVEN--VIRELVEEVKATSVFAEEEVEYHLRQMMAIVDETLAKVSLVDGKPKICLW 171 (599)
Q Consensus 98 L~~L~~~L~~~g~~L~v~---~g~~~~--~l~~l~~~~~~~~v~~~~~~~~~~~~~d~~v~~~l~~~gi~~~~~~~~~~ 171 (599)
...+++.+++.|..+.+. .|.... .|++.++ +++.|++-.++-.....+ .+++.+++.++ ++....
T Consensus 12 ~~~~~~~~~~~G~~~~~hg~~~~~~~~~~~l~~~i~--~aD~VIv~t~~vsH~~~~--~vk~~akk~~i----p~~~~~ 82 (97)
T PF10087_consen 12 ERRYKRILEKYGGKLIHHGRDGGDEKKASRLPSKIK--KADLVIVFTDYVSHNAMW--KVKKAAKKYGI----PIIYSR 82 (97)
T ss_pred HHHHHHHHHHcCCEEEEEecCCCCccchhHHHHhcC--CCCEEEEEeCCcChHHHH--HHHHHHHHcCC----cEEEEC
Confidence 456778888999999998 333322 2555555 378888777776665553 56777777765 666654
No 274
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=38.50 E-value=35 Score=34.68 Aligned_cols=30 Identities=27% Similarity=0.235 Sum_probs=23.7
Q ss_pred HHHHHHHhCCCCEEEEEeChHHHHHHHHHH
Q 007536 484 LRDFTVEVVGEPVHLIGNSIGGYFVAIVAC 513 (599)
Q Consensus 484 l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~ 513 (599)
+.+++.+.++.+-.++|||+|-..|+.++.
T Consensus 72 ~~~~l~~~Gi~p~~~~GhSlGE~aA~~~ag 101 (298)
T smart00827 72 LARLWRSWGVRPDAVVGHSLGEIAAAYVAG 101 (298)
T ss_pred HHHHHHHcCCcccEEEecCHHHHHHHHHhC
Confidence 335567788899999999999988876653
No 275
>COG0589 UspA Universal stress protein UspA and related nucleotide-binding proteins [Signal transduction mechanisms]
Probab=38.48 E-value=2.1e+02 Score=24.88 Aligned_cols=47 Identities=19% Similarity=0.136 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHHHhcCCc---EEEEEcCH-HHHHHHHHHHhCCcEEEEccc
Q 007536 94 VIFALEDLRKSLKEQGSD---LMIRFGRV-ENVIRELVEEVKATSVFAEEE 140 (599)
Q Consensus 94 l~~sL~~L~~~L~~~g~~---L~v~~g~~-~~~l~~l~~~~~~~~v~~~~~ 140 (599)
..+.+..+++.+.+.|+. ..+..|++ .+.+...+.+.+++.|+.-..
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~a~~~~adliV~G~~ 122 (154)
T COG0589 72 AEELLAEAKALAEAAGVPVVETEVVEGSPSAEEILELAEEEDADLIVVGSR 122 (154)
T ss_pred HHHHHHHHHHHHHHcCCCeeEEEEecCCCcHHHHHHHHHHhCCCEEEECCC
Confidence 357778888888888865 56778999 689999999999998887665
No 276
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=38.16 E-value=1.4e+02 Score=34.59 Aligned_cols=60 Identities=10% Similarity=0.050 Sum_probs=46.0
Q ss_pred HHHHHHHHHHHhcCCcEEEEEcCHHHHHHHHHHHhCCcEEEEccccChhHHHHHHHHHHHHHhcc
Q 007536 96 FALEDLRKSLKEQGSDLMIRFGRVENVIRELVEEVKATSVFAEEEVEYHLRQMMAIVDETLAKVS 160 (599)
Q Consensus 96 ~sL~~L~~~L~~~g~~L~v~~g~~~~~l~~l~~~~~~~~v~~~~~~~~~~~~~d~~v~~~l~~~g 160 (599)
+...+.=++|++.|++.+++.||.......++++.+++.|+.+.. |..+. ++.+.+++.|
T Consensus 448 ~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~elGId~v~A~~~--PedK~---~iV~~lQ~~G 507 (679)
T PRK01122 448 PGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDDFLAEAT--PEDKL---ALIRQEQAEG 507 (679)
T ss_pred hhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcEEEccCC--HHHHH---HHHHHHHHcC
Confidence 456666677899999999999999999999999999999876654 44443 3445566655
No 277
>TIGR03679 arCOG00187 arCOG00187 universal archaeal metal-binding-domain/4Fe-4S-binding-domain containing ABC transporter, ATP-binding protein. This model has the same scope as an archaeal COG (arCOG00187) and is found in all completely sequenced archaea and does not recognize any known non-archaeal genes.
Probab=37.85 E-value=2e+02 Score=27.90 Aligned_cols=92 Identities=13% Similarity=0.014 Sum_probs=49.7
Q ss_pred HHHHHHHhC-CCeEEEEEeCCcccccCCHhHHHHHHHHHHHHHHHHHhcCCcEEEEEcC-----HHHHH----HHHHHHh
Q 007536 61 LGLVAASKY-QAVVPLYVFDHRILSRYSNEMLELVIFALEDLRKSLKEQGSDLMIRFGR-----VENVI----RELVEEV 130 (599)
Q Consensus 61 ~aL~~A~~~-~~v~~vfi~d~~~~~~~~~~r~~Fl~~sL~~L~~~L~~~g~~L~v~~g~-----~~~~l----~~l~~~~ 130 (599)
-+|+.|.+. ..+++++.+.+.... ++.|-...+..+++..+.+|+++++..-+ ..+.+ .++.++
T Consensus 12 ~al~~a~~~G~~v~~l~~~~~~~~~-----~~~~~~~~~~~~~~~A~~lgip~~~i~~~~~~~~~~~~l~~~l~~~~~~- 85 (218)
T TIGR03679 12 YALYKALEEGHEVRCLITVVPENEE-----SYMFHTPNIELTRLQAEALGIPLVKIETSGEKEKEVEDLKGALKELKRE- 85 (218)
T ss_pred HHHHHHHHcCCEEEEEEEeccCCCC-----ccccCCCCHHHHHHHHHHhCCCEEEEECCCCChHHHHHHHHHHHHHHHc-
Confidence 356666665 356566665553211 11011124556677778889999887633 22223 333333
Q ss_pred CCcEEEEccccChhHHHHHHHHHHHHHhccc
Q 007536 131 KATSVFAEEEVEYHLRQMMAIVDETLAKVSL 161 (599)
Q Consensus 131 ~~~~v~~~~~~~~~~~~~d~~v~~~l~~~gi 161 (599)
+++.|+.-.-...+.+.+.+ +.|...|+
T Consensus 86 g~~~vv~G~i~sd~~~~~~e---~v~~~~gl 113 (218)
T TIGR03679 86 GVEGIVTGAIASRYQKSRIE---RICEELGL 113 (218)
T ss_pred CCCEEEECCcccHhHHHHHH---HHHHhCCC
Confidence 88888887666655444444 44554443
No 278
>PF13167 GTP-bdg_N: GTP-binding GTPase N-terminal
Probab=37.56 E-value=1.7e+02 Score=24.45 Aligned_cols=53 Identities=25% Similarity=0.318 Sum_probs=38.5
Q ss_pred HHHHHHHHHHHHhcCCcEEE---------------EEcCHHHHHHHHHHHhCCcEEEEccccChhHHHH
Q 007536 95 IFALEDLRKSLKEQGSDLMI---------------RFGRVENVIRELVEEVKATSVFAEEEVEYHLRQM 148 (599)
Q Consensus 95 ~~sL~~L~~~L~~~g~~L~v---------------~~g~~~~~l~~l~~~~~~~~v~~~~~~~~~~~~~ 148 (599)
-++|.+|..-++..|+..+- -.|. .+.+.++++..+++.|+++.+..|...+.
T Consensus 7 ~~~l~El~~L~~t~g~~vv~~~~q~~~~~~p~~~iG~GK-~eei~~~~~~~~~d~vvfd~~Lsp~Q~rN 74 (95)
T PF13167_consen 7 EESLEELEELAETAGYEVVGTVVQKRRKPDPKTYIGSGK-VEEIKELIEELDADLVVFDNELSPSQQRN 74 (95)
T ss_pred HHHHHHHHHHHHHCCCeEEEEEEecCCCCCcceeechhH-HHHHHHHHhhcCCCEEEECCCCCHHHHHH
Confidence 47788888888888874332 1233 45677889999999999999987766554
No 279
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=37.30 E-value=35 Score=31.36 Aligned_cols=43 Identities=28% Similarity=0.370 Sum_probs=32.9
Q ss_pred HHHHHHHHHHHhcCCcEEEEEcCHHHHHHHHHHHhCCcEEEEc
Q 007536 96 FALEDLRKSLKEQGSDLMIRFGRVENVIRELVEEVKATSVFAE 138 (599)
Q Consensus 96 ~sL~~L~~~L~~~g~~L~v~~g~~~~~l~~l~~~~~~~~v~~~ 138 (599)
.++.++-+.|++.|.++.|..+.....+..+++.+++..++.+
T Consensus 76 ~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~~~~~ 118 (177)
T TIGR01488 76 PGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDDVFAN 118 (177)
T ss_pred cCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCchheee
Confidence 5667777778888888888888887778888888777766554
No 280
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=37.00 E-value=39 Score=34.39 Aligned_cols=30 Identities=27% Similarity=0.396 Sum_probs=23.6
Q ss_pred HHHHHHHhCCCCEEEEEeChHHHHHHHHHH
Q 007536 484 LRDFTVEVVGEPVHLIGNSIGGYFVAIVAC 513 (599)
Q Consensus 484 l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~ 513 (599)
+.+++.+.++.+..++|||+|-..|+.++.
T Consensus 66 l~~~l~~~g~~P~~v~GhS~GE~aAa~~aG 95 (295)
T TIGR03131 66 AWRALLALLPRPSAVAGYSVGEYAAAVVAG 95 (295)
T ss_pred HHHHHHhcCCCCcEEeecCHHHHHHHHHhC
Confidence 445566778899999999999988876653
No 281
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=36.83 E-value=35 Score=33.83 Aligned_cols=36 Identities=33% Similarity=0.430 Sum_probs=27.8
Q ss_pred CCeEEEECCCCCChHHHHHHHHHHHhCCCEEEEEcC
Q 007536 427 GPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITL 462 (599)
Q Consensus 427 ~p~vlllHG~~~~~~~w~~~~~~l~~~g~~vi~~D~ 462 (599)
-|.+++.||++.....-......++..++.++..+.
T Consensus 49 ~p~v~~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 84 (299)
T COG1073 49 LPAVVFLHGFGSSKEQSLGYAVLLAEKGYRVLAGDA 84 (299)
T ss_pred CceEEeccCccccccCcchHHHHhhhceeEEeeecc
Confidence 567999999988876654467777777888888775
No 282
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=36.25 E-value=24 Score=36.51 Aligned_cols=29 Identities=28% Similarity=0.359 Sum_probs=23.1
Q ss_pred HHHHHHHhCCCCEEEEEeChHHHHHHHHH
Q 007536 484 LRDFTVEVVGEPVHLIGNSIGGYFVAIVA 512 (599)
Q Consensus 484 l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a 512 (599)
+.+++...++.+-.++|||+|=..|+.++
T Consensus 74 l~~~l~~~Gi~P~~v~GhSlGE~aA~~aa 102 (318)
T PF00698_consen 74 LARLLRSWGIKPDAVIGHSLGEYAALVAA 102 (318)
T ss_dssp HHHHHHHTTHCESEEEESTTHHHHHHHHT
T ss_pred hhhhhcccccccceeeccchhhHHHHHHC
Confidence 44566778889999999999988887554
No 283
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=35.52 E-value=46 Score=34.28 Aligned_cols=62 Identities=15% Similarity=-0.024 Sum_probs=39.4
Q ss_pred HHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCEEEEEeChHHHHHHHHHHhC
Q 007536 442 HYRDNIYDIADGGNRVWAITLLGFGRSEKPNIVYTELMWSELLRDFTVEVVGEPVHLIGNSIGGYFVAIVACLW 515 (599)
Q Consensus 442 ~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~ 515 (599)
.|..+++.|... -..++++ |=|. . .....-+.+.+++.++..-.++|-|+|+.++..+|+.+
T Consensus 3 d~~rl~r~l~~~-~~gLvL~--GGG~----R-----G~ahiGvL~aLee~gi~~d~v~GtSaGAi~ga~ya~g~ 64 (306)
T cd07225 3 DFSRLARVLTGN-SIALVLG--GGGA----R-----GCAHIGVIKALEEAGIPVDMVGGTSIGAFIGALYAEER 64 (306)
T ss_pred hHHHHHHHhcCC-CEEEEEC--ChHH----H-----HHHHHHHHHHHHHcCCCCCEEEEECHHHHHHHHHHcCC
Confidence 567777888765 2333332 3221 0 11222344556677888889999999999999998864
No 284
>PF03441 FAD_binding_7: FAD binding domain of DNA photolyase from Prosite.; InterPro: IPR005101 This entry represents a multi-helical domain composed of two all-alpha subdomains that is found as the C-terminal domain in cryptochrome proteins, as well as at the N-terminal of DNA photolyase where it acts as a FAD-binding domain (the N-terminal of DNA photolyase binds a light-harvesting cofactor). Photolyases and cryptochromes are related flavoproteins that bind FAD. Photolyases harness the energy of blue light to repair DNA damage by removing pyrimidine dimers. Cryptochromes (CRY1 and CRY2) are blue light photoreceptors that mediate blue light-induced gene expression [, ]. DNA photolyases are DNA repair enzymes that repair mismatched pyrimidine dimers induced by exposure to ultra-violet light. They bind to UV-damaged DNA containing pyrimidine dimers and, upon absorbing a near-UV photon (300 to 500 nm), they catalyse dimer splitting, breaking the cyclobutane ring joining the two pyrimidines of the dimer so as to split them into the constituent monomers; this process is called photoreactivation. DNA photolyases require two choromophore-cofactors for their activity. All monomers contain a reduced FAD moiety, and, in addition, either a reduced pterin or 8-hydroxy-5-diazaflavin as a second chromophore. Either chromophore may act as the primary photon acceptor, peak absorptions occurring in the blue region of the spectrum and in the UV-B region, at a wavelength around 290nm [, ].; GO: 0003913 DNA photolyase activity, 0006281 DNA repair; PDB: 3UMV_A 3ZXS_A 1DNP_A 2XRZ_B 2XRY_A 2VTB_A 2J4D_B 2IJG_X 3TVS_A 2E0I_D ....
Probab=34.90 E-value=26 Score=35.58 Aligned_cols=56 Identities=16% Similarity=0.198 Sum_probs=37.0
Q ss_pred cccchhhHHHHHhhhcccccccCCCCCCCCccccCCCccccCCCCccccChHHHHHHHHHHHHhhccCccchHHHHHHh
Q 007536 244 NNMSAETILTDKLSKLGKRSKRNLNNQHSPRKRLDKSFFVTDKGNTVGGGTNAVLNALQAYLRYLEGTVRDDWQELQEK 322 (599)
Q Consensus 244 g~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gGe~~A~~~L~~fl~~~~~~~~~~Y~~~rn~ 322 (599)
|+++|+.+|++|++ +.+..|...++.+ ...|. .+|+.||.+|+.+...-|.+..+.
T Consensus 2 Ge~~A~~~L~~Fl~-~~l~~Y~~~r~~p------------------~~~~~----S~LSpyL~~G~lS~r~v~~~~~~~ 57 (277)
T PF03441_consen 2 GETAALKRLEEFLK-ERLADYGEQRDDP------------------AADGT----SRLSPYLNFGCLSPREVYRAVKKA 57 (277)
T ss_dssp SHHHHHHHHHHHHH-HCGGGHHHHTT-T------------------TSTTS-------HHHHHTTSS-HHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHH-HHHHhhchhccCC------------------CcCCc----CcccHHHhCCCcCHHHHHHHHHHH
Confidence 78899999999997 4445555555432 01122 489999999999988888887765
No 285
>TIGR01361 DAHP_synth_Bsub phospho-2-dehydro-3-deoxyheptonate aldolase. The member of this family from Synechocystis PCC 6803, CcmA, was shown to be essential for carboxysome formation. However, no other candidate for this enzyme is present in that species, chorismate biosynthesis does occur, other species having this protein lack carboxysomes but appear to make chorismate, and a requirement of CcmA for carboxysome formation does not prohibit a role in chorismate biosynthesis.
Probab=34.41 E-value=4e+02 Score=26.68 Aligned_cols=72 Identities=17% Similarity=0.150 Sum_probs=45.9
Q ss_pred CCCeEEEECCCCCChHHHHHHHHHHHhCCCEEEEEcCCCCCCCCC-CC--CCCCHHHHHHHHHHHHHHhCCCCEEE-EEe
Q 007536 426 EGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEK-PN--IVYTELMWSELLRDFTVEVVGEPVHL-IGN 501 (599)
Q Consensus 426 ~~p~vlllHG~~~~~~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~-~~--~~~~~~~~~~~l~~~l~~l~~~~~~l-vGh 501 (599)
.+.||++--|..++...|...++.+...|..=+++=.+| -|.. +. ...++..+. .+++.-.-++.+ .+|
T Consensus 131 ~gkPVilk~G~~~t~~e~~~Ave~i~~~Gn~~i~l~~rG--~s~y~~~~~~~~dl~~i~-----~lk~~~~~pV~~ds~H 203 (260)
T TIGR01361 131 QGKPVLLKRGMGNTIEEWLYAAEYILSSGNGNVILCERG--IRTFEKATRNTLDLSAVP-----VLKKETHLPIIVDPSH 203 (260)
T ss_pred CCCcEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEECC--CCCCCCCCcCCcCHHHHH-----HHHHhhCCCEEEcCCC
Confidence 477999999999999999999999988776433343333 3333 21 123332222 233332357888 799
Q ss_pred ChH
Q 007536 502 SIG 504 (599)
Q Consensus 502 S~G 504 (599)
|.|
T Consensus 204 s~G 206 (260)
T TIGR01361 204 AAG 206 (260)
T ss_pred CCC
Confidence 988
No 286
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=34.28 E-value=63 Score=30.31 Aligned_cols=44 Identities=23% Similarity=0.304 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHHhcCCcEEEEEcCHHHHHHHHHHHhCCcEEEEc
Q 007536 95 IFALEDLRKSLKEQGSDLMIRFGRVENVIRELVEEVKATSVFAE 138 (599)
Q Consensus 95 ~~sL~~L~~~L~~~g~~L~v~~g~~~~~l~~l~~~~~~~~v~~~ 138 (599)
+.++.++-+.|++.|+++.|..+.....+..+++.+++..++.+
T Consensus 82 ~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~~~~ 125 (201)
T TIGR01491 82 RDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYVYSN 125 (201)
T ss_pred CccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeEEEE
Confidence 34666777777777888888888777777777777777665543
No 287
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=33.74 E-value=44 Score=33.72 Aligned_cols=29 Identities=24% Similarity=0.142 Sum_probs=22.5
Q ss_pred HHHHHHhC-CCCEEEEEeChHHHHHHHHHH
Q 007536 485 RDFTVEVV-GEPVHLIGNSIGGYFVAIVAC 513 (599)
Q Consensus 485 ~~~l~~l~-~~~~~lvGhS~Gg~ia~~~a~ 513 (599)
.+.+.+.+ +.+..++|||+|=..|+.++.
T Consensus 73 ~~~l~~~g~i~p~~v~GhS~GE~aAa~~aG 102 (290)
T TIGR00128 73 YLKLKEQGGLKPDFAAGHSLGEYSALVAAG 102 (290)
T ss_pred HHHHHHcCCCCCCEEeecCHHHHHHHHHhC
Confidence 34456666 889999999999988876653
No 288
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=33.61 E-value=56 Score=30.24 Aligned_cols=31 Identities=19% Similarity=0.013 Sum_probs=25.0
Q ss_pred HHHHHhCCCCEEEEEeChHHHHHHHHHHhCC
Q 007536 486 DFTVEVVGEPVHLIGNSIGGYFVAIVACLWP 516 (599)
Q Consensus 486 ~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p 516 (599)
+.+.+.+...-.++|-|+|+.++..++...+
T Consensus 18 ~aL~e~gi~~d~v~GtSaGAi~aa~~a~g~~ 48 (172)
T cd07198 18 KALRERGPLIDIIAGTSAGAIVAALLASGRD 48 (172)
T ss_pred HHHHHcCCCCCEEEEECHHHHHHHHHHcCCC
Confidence 3445567778899999999999999998654
No 289
>PRK10279 hypothetical protein; Provisional
Probab=33.35 E-value=49 Score=34.01 Aligned_cols=33 Identities=27% Similarity=0.116 Sum_probs=26.7
Q ss_pred HHHHHHHhCCCCEEEEEeChHHHHHHHHHHhCC
Q 007536 484 LRDFTVEVVGEPVHLIGNSIGGYFVAIVACLWP 516 (599)
Q Consensus 484 l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p 516 (599)
+.+.+++.++..-.++|-|+|+.++..+|+...
T Consensus 23 VL~aL~E~gi~~d~i~GtS~GAlvga~yA~g~~ 55 (300)
T PRK10279 23 VINALKKVGIEIDIVAGCSIGSLVGAAYACDRL 55 (300)
T ss_pred HHHHHHHcCCCcCEEEEEcHHHHHHHHHHcCCh
Confidence 334566678888899999999999999997654
No 290
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=33.20 E-value=2.1e+02 Score=33.07 Aligned_cols=44 Identities=14% Similarity=0.161 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHhcCCcEEEEEcCHHHHHHHHHHHhCCcEEEEcc
Q 007536 96 FALEDLRKSLKEQGSDLMIRFGRVENVIRELVEEVKATSVFAEE 139 (599)
Q Consensus 96 ~sL~~L~~~L~~~g~~L~v~~g~~~~~l~~l~~~~~~~~v~~~~ 139 (599)
....+.=++|++.|+...++.||.......++++.+++.++.+.
T Consensus 449 p~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lGI~~v~a~~ 492 (675)
T TIGR01497 449 GGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGVDDFIAEA 492 (675)
T ss_pred hHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCEEEcCC
Confidence 55666777788999999999999999999999999999988753
No 291
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=32.90 E-value=68 Score=32.55 Aligned_cols=37 Identities=16% Similarity=0.267 Sum_probs=28.4
Q ss_pred HHHHHHHHHHHhcCCcEEEEEcCHHHHHHHHHHHhCC
Q 007536 96 FALEDLRKSLKEQGSDLMIRFGRVENVIRELVEEVKA 132 (599)
Q Consensus 96 ~sL~~L~~~L~~~g~~L~v~~g~~~~~l~~l~~~~~~ 132 (599)
.+..+|=+.|+++|+++.|..|.....+..+.++.++
T Consensus 124 pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl 160 (277)
T TIGR01544 124 DGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGV 160 (277)
T ss_pred cCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCC
Confidence 4667777888888888888888777777777776655
No 292
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=32.69 E-value=56 Score=31.13 Aligned_cols=42 Identities=17% Similarity=0.429 Sum_probs=32.2
Q ss_pred HHHHHHHHHHhcCCcEEEEEcCHHHHHHHHHHHhCCcE--EEEc
Q 007536 97 ALEDLRKSLKEQGSDLMIRFGRVENVIRELVEEVKATS--VFAE 138 (599)
Q Consensus 97 sL~~L~~~L~~~g~~L~v~~g~~~~~l~~l~~~~~~~~--v~~~ 138 (599)
++++|-..|+++|..++++.|.....+.-++.++++.. +|.|
T Consensus 92 Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN 135 (227)
T KOG1615|consen 92 GIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYAN 135 (227)
T ss_pred CHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhh
Confidence 67778888888888888888888777777777777765 5544
No 293
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=32.69 E-value=2.2e+02 Score=29.92 Aligned_cols=106 Identities=12% Similarity=0.043 Sum_probs=66.9
Q ss_pred CCeEEEECCCCCChHHH-HHHHHHHHhCCCEEEEEcCCCCCCCCCCC-CCCCHHHHHHHHHHHHHHhC--CCCEEEEEeC
Q 007536 427 GPAILLVHGFGAFLEHY-RDNIYDIADGGNRVWAITLLGFGRSEKPN-IVYTELMWSELLRDFTVEVV--GEPVHLIGNS 502 (599)
Q Consensus 427 ~p~vlllHG~~~~~~~w-~~~~~~l~~~g~~vi~~D~~G~G~S~~~~-~~~~~~~~~~~l~~~l~~l~--~~~~~lvGhS 502 (599)
..+||++=||.+..+-| ........+.||.++-+-.|-+-..-... ...+.......+..++.... ..++++--+|
T Consensus 38 ~k~Iv~~~gWag~~~r~l~ky~~~Yq~~g~~~~~~tap~~~~~~~~s~~~~sl~~~~~~l~~L~~~~~~~~~pi~fh~FS 117 (350)
T KOG2521|consen 38 EKPIVVLLGWAGAIDRNLMKYSKIYQDKGYIVVRITAPCPSVFLSASRRILSLSLASTRLSELLSDYNSDPCPIIFHVFS 117 (350)
T ss_pred cccEEEEeeeccccchhHHHHHHHHhcCCceEEEecCcccccccccccccchhhHHHHHHHHHhhhccCCcCceEEEEec
Confidence 43666666776665544 45566667779999999888664432221 23344455566667776666 3578888999
Q ss_pred hHHHHHHHHH---H-hC-C---cccceEEEEcCCCCCC
Q 007536 503 IGGYFVAIVA---C-LW-P---AVVKSVVLINSAGNVI 532 (599)
Q Consensus 503 ~Gg~ia~~~a---~-~~-p---~~v~~lvli~~~~~~~ 532 (599)
|||...+..- . ++ | +.+.+++..+.+....
T Consensus 118 ~ng~~~~~si~~~~~~~~~~~~~~~~~~~fdS~p~~~~ 155 (350)
T KOG2521|consen 118 GNGVRLMYSISLQLIKHEPKAAQLSGGIIFDSAPARSS 155 (350)
T ss_pred CCceeehHHHHHHHhhcCchhHhhcCCceEeccccccc
Confidence 9998776543 1 22 3 3567788877765533
No 294
>PF06792 UPF0261: Uncharacterised protein family (UPF0261); InterPro: IPR008322 The proteins in this entry are functionally uncharacterised.
Probab=32.55 E-value=6.6e+02 Score=27.00 Aligned_cols=101 Identities=16% Similarity=0.058 Sum_probs=65.7
Q ss_pred CeEEEECCCCCChHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCC----------C-------------CCCHHHHHHHH
Q 007536 428 PAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPN----------I-------------VYTELMWSELL 484 (599)
Q Consensus 428 p~vlllHG~~~~~~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~----------~-------------~~~~~~~~~~l 484 (599)
|.|+++--+-.-...+..+.+.+.+.|..|+.+|.-=.|.+..+. . ...++.+++.+
T Consensus 2 ~tI~iigT~DTK~~E~~yl~~~i~~~G~~v~~iDvg~~~~~~~~~di~~~eVa~~~g~~~~~~~~~~dRg~ai~~M~~ga 81 (403)
T PF06792_consen 2 KTIAIIGTLDTKGEELLYLRDQIEAQGVEVLLIDVGTLGEPSFPPDISREEVARAAGDSIEAVRSSGDRGEAIEAMARGA 81 (403)
T ss_pred CEEEEEEccCCCHHHHHHHHHHHHHCCCcEEEEEcCCCCCCCCCCCcCHHHHHHhcCCChHHhhccCCHHHHHHHHHHHH
Confidence 345555444444567777778888889999999986655543221 0 01123344444
Q ss_pred HHHHHHhC----CCCEEEEEeChHHHHHHHHHHhCCcccceEEEEcCC
Q 007536 485 RDFTVEVV----GEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSA 528 (599)
Q Consensus 485 ~~~l~~l~----~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~ 528 (599)
..++..+. ++-++-+|-|.|..++.......|--+-++++.--+
T Consensus 82 ~~~v~~l~~~g~i~Gvi~~GGs~GT~lat~aMr~LPiG~PKlmVST~A 129 (403)
T PF06792_consen 82 ARFVSDLYDEGKIDGVIGIGGSGGTALATAAMRALPIGFPKLMVSTMA 129 (403)
T ss_pred HHHHHHHHhcCCccEEEEecCCccHHHHHHHHHhCCCCCCeEEEEccC
Confidence 45555443 356888999999999999988888777777654433
No 295
>KOG2385 consensus Uncharacterized conserved protein [Function unknown]
Probab=32.54 E-value=86 Score=34.34 Aligned_cols=42 Identities=19% Similarity=0.240 Sum_probs=31.6
Q ss_pred hCCCCEEEEEeChHHHHHHHHHHh-----CCcccceEEEEcCCCCCC
Q 007536 491 VVGEPVHLIGNSIGGYFVAIVACL-----WPAVVKSVVLINSAGNVI 532 (599)
Q Consensus 491 l~~~~~~lvGhS~Gg~ia~~~a~~-----~p~~v~~lvli~~~~~~~ 532 (599)
++..|+.|||+|+|+-+....... .-+.|..+++++++....
T Consensus 444 qG~RPVTLVGFSLGARvIf~CL~~Lakkke~~iIEnViL~GaPv~~k 490 (633)
T KOG2385|consen 444 QGNRPVTLVGFSLGARVIFECLLELAKKKEVGIIENVILFGAPVPTK 490 (633)
T ss_pred cCCCceeEeeeccchHHHHHHHHHHhhcccccceeeeeeccCCccCC
Confidence 456899999999999998755442 224689999999875544
No 296
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=32.25 E-value=59 Score=30.57 Aligned_cols=30 Identities=20% Similarity=0.088 Sum_probs=23.8
Q ss_pred HHHHhCCCCEEEEEeChHHHHHHHHHHhCC
Q 007536 487 FTVEVVGEPVHLIGNSIGGYFVAIVACLWP 516 (599)
Q Consensus 487 ~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p 516 (599)
.+++.+...-.++|-|.||.+|..++..+.
T Consensus 20 ~L~e~~~~~d~i~GtSaGai~aa~~a~g~~ 49 (194)
T cd07207 20 ALEEAGILKKRVAGTSAGAITAALLALGYS 49 (194)
T ss_pred HHHHcCCCcceEEEECHHHHHHHHHHcCCC
Confidence 344556677889999999999999987543
No 297
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=31.55 E-value=87 Score=29.00 Aligned_cols=41 Identities=24% Similarity=0.447 Sum_probs=36.4
Q ss_pred HHHHHHHhcCCcEEEEEcCHHHHHHHHHHHhCCcE--EEEccc
Q 007536 100 DLRKSLKEQGSDLMIRFGRVENVIRELVEEVKATS--VFAEEE 140 (599)
Q Consensus 100 ~L~~~L~~~g~~L~v~~g~~~~~l~~l~~~~~~~~--v~~~~~ 140 (599)
++-+.|++.|++++|+.|.+...+..+++.+++.. |++++.
T Consensus 96 e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~v~~~~~ 138 (192)
T PF12710_consen 96 ELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDNVIGNEL 138 (192)
T ss_dssp HHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGGEEEEEE
T ss_pred HHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEEEEEee
Confidence 67777888899999999999999999999999987 777776
No 298
>TIGR01088 aroQ 3-dehydroquinate dehydratase, type II. This model specifies the type II enzyme. The type I enzyme, often found as part of a multifunctional protein, is described by TIGR01093.
Probab=31.33 E-value=3.5e+02 Score=24.44 Aligned_cols=73 Identities=14% Similarity=0.187 Sum_probs=45.2
Q ss_pred HHHHHHHHHH----hcCCcEEEEEcCHHHHHHHHHHHh--CCcEEEEcc-ccChhHHHHHHHHHHHHHhcccCCCCceeE
Q 007536 97 ALEDLRKSLK----EQGSDLMIRFGRVENVIRELVEEV--KATSVFAEE-EVEYHLRQMMAIVDETLAKVSLVDGKPKIC 169 (599)
Q Consensus 97 sL~~L~~~L~----~~g~~L~v~~g~~~~~l~~l~~~~--~~~~v~~~~-~~~~~~~~~d~~v~~~l~~~gi~~~~~~~~ 169 (599)
+|.++++.|+ ++|+.+.+++.+.+..+...+++. +++.|+.|- .|+.... ++..++...+ +|++.
T Consensus 25 tl~di~~~~~~~a~~~g~~v~~~QSN~EGelId~i~~a~~~~dgiIINpga~THtSi----Al~DAl~~~~----~P~vE 96 (141)
T TIGR01088 25 TLEEIVEIIETFAAQLNVELEFFQSNSEGQLIDKIHEAEGQYDGIIINPGALTHTSV----ALRDALAAVS----LPVVE 96 (141)
T ss_pred CHHHHHHHHHHHHHHcCCEEEEEeeCcHHHHHHHHHhccccCCEEEEcChHHhhhHH----HHHHHHHcCC----CCEEE
Confidence 4555555444 458999999988887777766664 356777774 3333333 3445555444 48888
Q ss_pred eeCccccc
Q 007536 170 LWQTPFYD 177 (599)
Q Consensus 170 ~~~~~l~~ 177 (599)
++-+-++.
T Consensus 97 VHiSNi~a 104 (141)
T TIGR01088 97 VHLSNVHA 104 (141)
T ss_pred EEcCCccc
Confidence 87554443
No 299
>PRK10490 sensor protein KdpD; Provisional
Probab=31.13 E-value=3e+02 Score=33.06 Aligned_cols=69 Identities=14% Similarity=0.159 Sum_probs=48.7
Q ss_pred CCeEEEEEeCCcccccCCHhHHHHHHHHHHHHHHHHHhcCCcEEEEEc-CHHHHHHHHHHHhCCcEEEEccccCh
Q 007536 70 QAVVPLYVFDHRILSRYSNEMLELVIFALEDLRKSLKEQGSDLMIRFG-RVENVIRELVEEVKATSVFAEEEVEY 143 (599)
Q Consensus 70 ~~v~~vfi~d~~~~~~~~~~r~~Fl~~sL~~L~~~L~~~g~~L~v~~g-~~~~~l~~l~~~~~~~~v~~~~~~~~ 143 (599)
.++++||+-++..-. .+.....-+.+.++ | .+++|...+.+.| +..+.+.+++++.+++.|+.-+.-..
T Consensus 279 a~~~~l~V~~~~~~~-~~~~~~~~l~~~~~-l---A~~lGa~~~~~~~~dva~~i~~~A~~~~vt~IViG~s~~~ 348 (895)
T PRK10490 279 SVWHAVYVETPRLHR-LPEKKRRAILSALR-L---AQELGAETATLSDPAEEKAVLRYAREHNLGKIIIGRRASR 348 (895)
T ss_pred CCEEEEEEecCCcCc-CCHHHHHHHHHHHH-H---HHHcCCEEEEEeCCCHHHHHHHHHHHhCCCEEEECCCCCC
Confidence 589999998764322 23333333444442 3 3456999888877 68899999999999999998887654
No 300
>TIGR03556 photolyase_8HDF deoxyribodipyrimidine photo-lyase, 8-HDF type. This model describes a narrow clade of cyanobacterial deoxyribodipyrimidine photo-lyase. This group, in contrast to several closely related proteins, uses a chromophore that, in other lineages is modified further to become coenzyme F420. This chromophore is called 8-HDF in most articles on the DNA photolyase and FO in most literature on coenzyme F420.
Probab=30.59 E-value=24 Score=38.74 Aligned_cols=86 Identities=17% Similarity=0.132 Sum_probs=48.1
Q ss_pred hcccchhhHHHHHhhhcccccccCCCCCCCCccccCCCccccCCCCccccChHHHHHHHHHHHHhhccCccchHHHHHHh
Q 007536 243 INNMSAETILTDKLSKLGKRSKRNLNNQHSPRKRLDKSFFVTDKGNTVGGGTNAVLNALQAYLRYLEGTVRDDWQELQEK 322 (599)
Q Consensus 243 ~g~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gGe~~A~~~L~~fl~~~~~~~~~~Y~~~rn~ 322 (599)
+|+++|++.|++|++. .+.+|...++.+. ..|. .+|+.||++|+.+...-|.+.++.
T Consensus 206 gGe~~A~~~L~~f~~~-~l~~Y~~~r~~p~------------------~~~t----S~LSpyL~~G~iS~r~v~~~~~~~ 262 (471)
T TIGR03556 206 PGETAAQARLEEFCDR-AIADYQEQRNFPA------------------LDGT----SQLSPALKFGVIGIRTVWQATQEA 262 (471)
T ss_pred CcHHHHHHHHHHHHHH-HHHHhhhccCCCC------------------CCCC----CCCChhhcCCcccHHHHHHHHHHH
Confidence 4889999999999974 4556655555321 1111 267777777777766666666543
Q ss_pred hccccCCCCCCcccccccchhccccchhHHHHHH
Q 007536 323 LRNAESRDGASFATLFGPALCLGIISRRGVHYEA 356 (599)
Q Consensus 323 ~r~~~~~~~~~~tS~LSpyL~~G~IS~R~v~~~v 356 (599)
..+ ..+......+..| +..|.-|+.|+.+
T Consensus 263 ~~~---~~~~~~~~~~~~f--~~eL~WRef~~~~ 291 (471)
T TIGR03556 263 HEN---SRSEEARNSIRTW--QQELAWREFYQHA 291 (471)
T ss_pred Hhh---cccccccccHHHH--HHHHHHHHHHHHH
Confidence 111 0111112222234 3467677776654
No 301
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=30.28 E-value=65 Score=32.55 Aligned_cols=32 Identities=19% Similarity=0.019 Sum_probs=25.9
Q ss_pred HHHHHHHhCCCCEEEEEeChHHHHHHHHHHhC
Q 007536 484 LRDFTVEVVGEPVHLIGNSIGGYFVAIVACLW 515 (599)
Q Consensus 484 l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~ 515 (599)
+.+.+++.++..-.++|-|+|+.++..+|..+
T Consensus 28 VL~aLeE~gi~~d~v~GtSaGAiiga~ya~g~ 59 (269)
T cd07227 28 ILQALEEAGIPIDAIGGTSIGSFVGGLYAREA 59 (269)
T ss_pred HHHHHHHcCCCccEEEEECHHHHHHHHHHcCC
Confidence 33445677888888999999999999998764
No 302
>cd00466 DHQase_II Dehydroquinase (DHQase), type II. Dehydroquinase (or 3-dehydroquinate dehydratase) catalyzes the reversible dehydration of 3-dehydroquinate to form 3-dehydroshikimate. This reaction is part of two metabolic pathways: the biosynthetic shikimate pathway and the catabolic quinate pathway. There are two types of DHQases, which are distinct from each other in amino acid sequence and three-dimensional structure. Type I enzymes usually catalyze the biosynthetic reaction using a syn elimination mechanism. In contrast, type II enzymes, found in the quinate pathway of fungi and in the shikimate pathway of many bacteria, are dodecameric enzymes that employ an anti elimination reaction mechanism.
Probab=30.16 E-value=4.1e+02 Score=23.97 Aligned_cols=75 Identities=19% Similarity=0.192 Sum_probs=45.4
Q ss_pred HHHHHHHHHHH----hcCCcEEEEEcCHHHHHHHHHHHh--CCcEEEEccc-cChhHHHHHHHHHHHHHhcccCCCCcee
Q 007536 96 FALEDLRKSLK----EQGSDLMIRFGRVENVIRELVEEV--KATSVFAEEE-VEYHLRQMMAIVDETLAKVSLVDGKPKI 168 (599)
Q Consensus 96 ~sL~~L~~~L~----~~g~~L~v~~g~~~~~l~~l~~~~--~~~~v~~~~~-~~~~~~~~d~~v~~~l~~~gi~~~~~~~ 168 (599)
++|.++.+.|+ ++|+.+.+++.+.+..+...+++. +++.|+.|-. |+.... ++..++...+ +|++
T Consensus 24 ~tl~~i~~~l~~~a~~~g~~v~~~QSN~Egelid~I~~a~~~~dgiIINpga~THtSv----Ai~DAl~~~~----~P~V 95 (140)
T cd00466 24 TTLADIEALLRELAAELGVEVEFFQSNHEGELIDWIHEARDGADGIIINPGAYTHTSI----ALRDALAAVS----IPVI 95 (140)
T ss_pred CCHHHHHHHHHHHHHHcCCEEEEEeeCcHHHHHHHHHHhhccCcEEEEcchHHHHHHH----HHHHHHHcCC----CCEE
Confidence 34444444444 458999999988877776666653 4677777743 333332 4455555444 4888
Q ss_pred EeeCcccccC
Q 007536 169 CLWQTPFYDI 178 (599)
Q Consensus 169 ~~~~~~l~~~ 178 (599)
.++-+-++..
T Consensus 96 EVHiSNi~aR 105 (140)
T cd00466 96 EVHISNIHAR 105 (140)
T ss_pred EEecCCcccc
Confidence 8875555433
No 303
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=29.76 E-value=64 Score=33.14 Aligned_cols=33 Identities=18% Similarity=0.008 Sum_probs=27.1
Q ss_pred HHHHHHHhCCCCEEEEEeChHHHHHHHHHHhCC
Q 007536 484 LRDFTVEVVGEPVHLIGNSIGGYFVAIVACLWP 516 (599)
Q Consensus 484 l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p 516 (599)
+.+.|++.++..-.|.|-|||+.++..+|..+.
T Consensus 29 Vl~aL~e~gi~~~~iaGtS~GAiva~l~A~g~~ 61 (306)
T COG1752 29 VLKALEEAGIPIDVIAGTSAGAIVAALYAAGMD 61 (306)
T ss_pred HHHHHHHcCCCccEEEecCHHHHHHHHHHcCCC
Confidence 445567778889999999999999999988543
No 304
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=29.69 E-value=76 Score=30.93 Aligned_cols=30 Identities=23% Similarity=0.209 Sum_probs=23.5
Q ss_pred HHHHhCCCCEEEEEeChHHHHHHHHHHhCC
Q 007536 487 FTVEVVGEPVHLIGNSIGGYFVAIVACLWP 516 (599)
Q Consensus 487 ~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p 516 (599)
.+.+.+...-.++|-|+|+.+|..+|..++
T Consensus 21 aL~e~gi~~~~i~GtSaGAi~aa~~a~g~~ 50 (221)
T cd07210 21 ALLEMGLEPSAISGTSAGALVGGLFASGIS 50 (221)
T ss_pred HHHHcCCCceEEEEeCHHHHHHHHHHcCCC
Confidence 344556677789999999999999987543
No 305
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=28.94 E-value=65 Score=30.88 Aligned_cols=44 Identities=23% Similarity=0.341 Sum_probs=29.4
Q ss_pred HHHHHHHHHHHHhcCCcEEEEEcCHHHHHHHHHHHhCCcEEEEc
Q 007536 95 IFALEDLRKSLKEQGSDLMIRFGRVENVIRELVEEVKATSVFAE 138 (599)
Q Consensus 95 ~~sL~~L~~~L~~~g~~L~v~~g~~~~~l~~l~~~~~~~~v~~~ 138 (599)
.+++.++=+.|++.|.++.+..+.....+..+++.+++..++.+
T Consensus 87 ~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~~~~ 130 (219)
T TIGR00338 87 TEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAFAN 130 (219)
T ss_pred CCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEee
Confidence 34566666777777777777777766666667777776665543
No 306
>PRK11175 universal stress protein UspE; Provisional
Probab=28.93 E-value=4.1e+02 Score=26.69 Aligned_cols=42 Identities=24% Similarity=0.253 Sum_probs=31.4
Q ss_pred HHHHHHHHhcCCc---EEEEEcCHHHHHHHHHHHhCCcEEEEccc
Q 007536 99 EDLRKSLKEQGSD---LMIRFGRVENVIRELVEEVKATSVFAEEE 140 (599)
Q Consensus 99 ~~L~~~L~~~g~~---L~v~~g~~~~~l~~l~~~~~~~~v~~~~~ 140 (599)
..+++-+++.|++ .++..|++.+.+.+.+++.+++-|++...
T Consensus 226 ~~l~~~~~~~~~~~~~~~v~~G~~~~~I~~~a~~~~~DLIVmG~~ 270 (305)
T PRK11175 226 LAMKALRQKFGIDEEQTHVEEGLPEEVIPDLAEHLDAELVILGTV 270 (305)
T ss_pred HHHHHHHHHhCCChhheeeccCCHHHHHHHHHHHhCCCEEEECCC
Confidence 3444444555654 56778999999999999999999887654
No 307
>PRK13015 3-dehydroquinate dehydratase; Reviewed
Probab=28.44 E-value=4.5e+02 Score=23.86 Aligned_cols=72 Identities=14% Similarity=0.183 Sum_probs=43.6
Q ss_pred HHHHHHHHH----HhcCCcEEEEEcCHHHHHHHHHHHh--CCcEEEEccc-cChhHHHHHHHHHHHHHhcccCCCCceeE
Q 007536 97 ALEDLRKSL----KEQGSDLMIRFGRVENVIRELVEEV--KATSVFAEEE-VEYHLRQMMAIVDETLAKVSLVDGKPKIC 169 (599)
Q Consensus 97 sL~~L~~~L----~~~g~~L~v~~g~~~~~l~~l~~~~--~~~~v~~~~~-~~~~~~~~d~~v~~~l~~~gi~~~~~~~~ 169 (599)
+|.++++.| +++|+.+.+++.+.+-.+...+++. +++.|+.|-. |+.+.. .++.+++..+ +|++.
T Consensus 27 tl~~i~~~~~~~a~~~g~~~~~~QSN~EGelId~i~~a~~~~dgiIINpga~THtSi----Al~DAl~~~~----~P~VE 98 (146)
T PRK13015 27 TLADVEALCRAAAEALGLEVEFRQSNHEGELIDWIHEARGDVAGIVINPGAYTHTSV----AIRDALAALE----LPVIE 98 (146)
T ss_pred CHHHHHHHHHHHHHHcCCEEEEEeeCcHHHHHHHHHHhhhcCCEEEEcchHHhhhHH----HHHHHHHcCC----CCEEE
Confidence 444444444 4458999999988877776666553 4677777743 333333 3444455444 48888
Q ss_pred eeCcccc
Q 007536 170 LWQTPFY 176 (599)
Q Consensus 170 ~~~~~l~ 176 (599)
++-+.++
T Consensus 99 VHiSNi~ 105 (146)
T PRK13015 99 VHISNVH 105 (146)
T ss_pred EEcCCcc
Confidence 8754444
No 308
>PRK02399 hypothetical protein; Provisional
Probab=28.27 E-value=7.7e+02 Score=26.48 Aligned_cols=101 Identities=17% Similarity=0.049 Sum_probs=62.0
Q ss_pred CeEEEECCCCCChHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCC-----------------------CCCCHHHHHHHH
Q 007536 428 PAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPN-----------------------IVYTELMWSELL 484 (599)
Q Consensus 428 p~vlllHG~~~~~~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~-----------------------~~~~~~~~~~~l 484 (599)
+.|+++--+-.-......+.+.+.++|..|+.+|.-..|....+. ....++.+++..
T Consensus 4 ~~I~iigT~DTK~~E~~yl~~~i~~~g~~v~~iDv~~~~~p~~~~dis~~~Va~~~g~~~~~~~~~~dRg~ai~~M~~ga 83 (406)
T PRK02399 4 KRIYIAGTLDTKGEELAYVKDLIEAAGLEVVTVDVSGLGEPPFEPDISAEEVAEAAGDGIEAVFCGGDRGSAMAAMAEGA 83 (406)
T ss_pred CEEEEEeccCCcHHHHHHHHHHHHHCCCceEEEecCCCCCCCCCCCCCHHHHHHHcCCCHHHhhcCccHHHHHHHHHHHH
Confidence 444444333334556666667777779999999985444221110 001123344444
Q ss_pred HHHHHHh----CCCCEEEEEeChHHHHHHHHHHhCCcccceEEEEcCC
Q 007536 485 RDFTVEV----VGEPVHLIGNSIGGYFVAIVACLWPAVVKSVVLINSA 528 (599)
Q Consensus 485 ~~~l~~l----~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~ 528 (599)
..++..+ .++-++-+|-|+|..++......-|--+-++++.--+
T Consensus 84 ~~~v~~L~~~g~i~gviglGGs~GT~lat~aMr~LPiG~PKlmVSTmA 131 (406)
T PRK02399 84 AAFVRELYERGDVAGVIGLGGSGGTALATPAMRALPIGVPKLMVSTMA 131 (406)
T ss_pred HHHHHHHHhcCCccEEEEecCcchHHHHHHHHHhCCCCCCeEEEEccc
Confidence 4555443 2456889999999999999988888777776654433
No 309
>PRK13397 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=27.61 E-value=6e+02 Score=25.36 Aligned_cols=90 Identities=14% Similarity=0.168 Sum_probs=54.5
Q ss_pred CCCeEEEECCCCCChHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCC---CCCHHHHHHHHHHHHHHhCCCCEEE-EEe
Q 007536 426 EGPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNI---VYTELMWSELLRDFTVEVVGEPVHL-IGN 501 (599)
Q Consensus 426 ~~p~vlllHG~~~~~~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~---~~~~~~~~~~l~~~l~~l~~~~~~l-vGh 501 (599)
.+.||++=-|...+.+.|...++.+...|..=+++=.||. |..+.. ..++..+ ..+.+.-.-+|++ ..|
T Consensus 121 tgkPVilk~G~~~t~~e~~~A~e~i~~~Gn~~i~L~eRg~--~~Y~~~~~n~~dl~ai-----~~lk~~~~lPVivd~SH 193 (250)
T PRK13397 121 IDKPILFKRGLMATIEEYLGALSYLQDTGKSNIILCERGV--RGYDVETRNMLDIMAV-----PIIQQKTDLPIIVDVSH 193 (250)
T ss_pred cCCeEEEeCCCCCCHHHHHHHHHHHHHcCCCeEEEEcccc--CCCCCccccccCHHHH-----HHHHHHhCCCeEECCCC
Confidence 4688999999999999999999999988875556656665 443322 2222221 1233322345555 568
Q ss_pred ChHH-----HHHHHHHHhCCcccceEEEE
Q 007536 502 SIGG-----YFVAIVACLWPAVVKSVVLI 525 (599)
Q Consensus 502 S~Gg-----~ia~~~a~~~p~~v~~lvli 525 (599)
|.|- .++..+.+. ...|+++-
T Consensus 194 s~G~r~~v~~~a~AAvA~---GAdGl~IE 219 (250)
T PRK13397 194 STGRRDLLLPAAKIAKAV---GANGIMME 219 (250)
T ss_pred CCcccchHHHHHHHHHHh---CCCEEEEE
Confidence 8774 444444333 25666654
No 310
>PF13911 AhpC-TSA_2: AhpC/TSA antioxidant enzyme
Probab=27.51 E-value=1.2e+02 Score=25.71 Aligned_cols=41 Identities=22% Similarity=0.353 Sum_probs=29.9
Q ss_pred HHHHHHHHHhcCCcEEEEE-cCHHHHHHHHHHHh--CCcEEEEccc
Q 007536 98 LEDLRKSLKEQGSDLMIRF-GRVENVIRELVEEV--KATSVFAEEE 140 (599)
Q Consensus 98 L~~L~~~L~~~g~~L~v~~-g~~~~~l~~l~~~~--~~~~v~~~~~ 140 (599)
|.....+|++.|+.|+++- |++.. +.++++.. ... ||++.+
T Consensus 2 L~~~~~~l~~~gv~lv~I~~g~~~~-~~~f~~~~~~p~~-ly~D~~ 45 (115)
T PF13911_consen 2 LSRRKPELEAAGVKLVVIGCGSPEG-IEKFCELTGFPFP-LYVDPE 45 (115)
T ss_pred hhHhHHHHHHcCCeEEEEEcCCHHH-HHHHHhccCCCCc-EEEeCc
Confidence 5677888999999988875 55544 88888664 444 777765
No 311
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=26.70 E-value=86 Score=36.32 Aligned_cols=59 Identities=15% Similarity=0.124 Sum_probs=43.8
Q ss_pred HHHHHHHHHHhcCCcEEEEEcCHHHHHHHHHHHhCCcEEEEccccChhHHHHHHHHHHHHHhcc
Q 007536 97 ALEDLRKSLKEQGSDLMIRFGRVENVIRELVEEVKATSVFAEEEVEYHLRQMMAIVDETLAKVS 160 (599)
Q Consensus 97 sL~~L~~~L~~~g~~L~v~~g~~~~~l~~l~~~~~~~~v~~~~~~~~~~~~~d~~v~~~l~~~g 160 (599)
.-.+.-++|+++|+..+++.||.......++++.+++.|+.+--+ .++. ++.+.|++.|
T Consensus 541 ~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~lGId~v~AellP--edK~---~~V~~l~~~g 599 (713)
T COG2217 541 DAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGIDEVRAELLP--EDKA---EIVRELQAEG 599 (713)
T ss_pred hHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcChHhheccCCc--HHHH---HHHHHHHhcC
Confidence 344455667889999999999999999999999999999887654 4332 2344455543
No 312
>COG1225 Bcp Peroxiredoxin [Posttranslational modification, protein turnover, chaperones]
Probab=26.62 E-value=4.4e+02 Score=24.27 Aligned_cols=66 Identities=14% Similarity=0.197 Sum_probs=47.8
Q ss_pred CCeEEEEEeCCcccccCCHhHHHHHHHHHHHHHHHHHhcCCcEEEEEcCHHHHHHHHHHHhCCc-EEEEccc
Q 007536 70 QAVVPLYVFDHRILSRYSNEMLELVIFALEDLRKSLKEQGSDLMIRFGRVENVIRELVEEVKAT-SVFAEEE 140 (599)
Q Consensus 70 ~~v~~vfi~d~~~~~~~~~~r~~Fl~~sL~~L~~~L~~~g~~L~v~~g~~~~~l~~l~~~~~~~-~v~~~~~ 140 (599)
++-++||++. ........... ...+++..+++++|...+=+.-++.+...+++++++.+ .+..+.+
T Consensus 30 Gk~VVLyFYP-k~~TpgCT~Ea----~~Frd~~~ef~~~~a~V~GIS~Ds~~~~~~F~~k~~L~f~LLSD~~ 96 (157)
T COG1225 30 GKPVVLYFYP-KDFTPGCTTEA----CDFRDLLEEFEKLGAVVLGISPDSPKSHKKFAEKHGLTFPLLSDED 96 (157)
T ss_pred CCcEEEEECC-CCCCCcchHHH----HHHHHHHHHHHhCCCEEEEEeCCCHHHHHHHHHHhCCCceeeECCc
Confidence 5667777774 33332333333 56677788888999999989999999999999999988 4445544
No 313
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=26.14 E-value=1.1e+02 Score=34.34 Aligned_cols=46 Identities=20% Similarity=0.212 Sum_probs=41.0
Q ss_pred HHHHHHHHHHHHHhcC-CcEEEEEcCHHHHHHHHHHHhCCcEEEEcc
Q 007536 94 VIFALEDLRKSLKEQG-SDLMIRFGRVENVIRELVEEVKATSVFAEE 139 (599)
Q Consensus 94 l~~sL~~L~~~L~~~g-~~L~v~~g~~~~~l~~l~~~~~~~~v~~~~ 139 (599)
+..++.++-+.|++.| +++.+..|++......++++.+++.++.+.
T Consensus 385 ~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~~~f~~~ 431 (556)
T TIGR01525 385 LRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGIDEVHAEL 431 (556)
T ss_pred chHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCCeeeccC
Confidence 5578888888899999 999999999999999999999999888753
No 314
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=26.04 E-value=2.8e+02 Score=33.37 Aligned_cols=39 Identities=26% Similarity=0.194 Sum_probs=34.7
Q ss_pred HHHHHHHHHHHHhcCCcEEEEEcCHHHHHHHHHHHhCCc
Q 007536 95 IFALEDLRKSLKEQGSDLMIRFGRVENVIRELVEEVKAT 133 (599)
Q Consensus 95 ~~sL~~L~~~L~~~g~~L~v~~g~~~~~l~~l~~~~~~~ 133 (599)
.+...+.-++|++.|++..++.||.......++++.++.
T Consensus 552 R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~ 590 (902)
T PRK10517 552 KETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLD 590 (902)
T ss_pred hhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC
Confidence 466777778889999999999999999999999999986
No 315
>PRK11613 folP dihydropteroate synthase; Provisional
Probab=25.99 E-value=3.6e+02 Score=27.43 Aligned_cols=56 Identities=20% Similarity=0.144 Sum_probs=29.1
Q ss_pred HHHHHHHHHhCCCE--EEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh-CCCCEEEEEeChHHH
Q 007536 443 YRDNIYDIADGGNR--VWAITLLGFGRSEKPNIVYTELMWSELLRDFTVEV-VGEPVHLIGNSIGGY 506 (599)
Q Consensus 443 w~~~~~~l~~~g~~--vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l-~~~~~~lvGhS~Gg~ 506 (599)
+...++.+.+.|.. -|.+|. |+|.+.. .++-.+.+.. ++.+ ..+..+++|+|==.+
T Consensus 165 l~~~i~~a~~~GI~~~~IilDP-GiGF~k~------~~~n~~ll~~-l~~l~~lg~Pilvg~SRKsf 223 (282)
T PRK11613 165 FIEQIARCEAAGIAKEKLLLDP-GFGFGKN------LSHNYQLLAR-LAEFHHFNLPLLVGMSRKSM 223 (282)
T ss_pred HHHHHHHHHHcCCChhhEEEeC-CCCcCCC------HHHHHHHHHH-HHHHHhCCCCEEEEecccHH
Confidence 34445666677875 777886 6765431 1211112221 2222 235677999984333
No 316
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=25.97 E-value=4.3e+02 Score=28.29 Aligned_cols=95 Identities=16% Similarity=0.122 Sum_probs=54.1
Q ss_pred CeEEEECCCCCC---hHHHHHHHHHHHhCCCEEEEEcCCCC---CCCCCCCCCCCHHHHHHHHHHHHHH---hCCCCEEE
Q 007536 428 PAILLVHGFGAF---LEHYRDNIYDIADGGNRVWAITLLGF---GRSEKPNIVYTELMWSELLRDFTVE---VVGEPVHL 498 (599)
Q Consensus 428 p~vlllHG~~~~---~~~w~~~~~~l~~~g~~vi~~D~~G~---G~S~~~~~~~~~~~~~~~l~~~l~~---l~~~~~~l 498 (599)
.+||+++-+... .......+..|.+.|+.|+-+.. |+ |.... ....+.++..+.+...+.. +...++.+
T Consensus 113 ~plviaPamn~~m~~~p~~~~Nl~~L~~~G~~vv~P~~-g~~ac~~~g~-g~~~~~~~i~~~v~~~~~~~~~~~~~~vli 190 (390)
T TIGR00521 113 APIILAPAMNENMYNNPAVQENIKRLKDDGYIFIEPDS-GLLACGDEGK-GRLAEPETIVKAAEREFSPKEDLEGKRVLI 190 (390)
T ss_pred CCEEEEeCCChhhcCCHHHHHHHHHHHHCCcEEECCCC-cccccccccC-CCCCCHHHHHHHHHHHHhhccccCCceEEE
Confidence 456666654332 22445667888888887766543 32 33221 1234666776766666543 44456666
Q ss_pred EEe------------------ChHHHHHHHHHHhCCcccceEEEEcCC
Q 007536 499 IGN------------------SIGGYFVAIVACLWPAVVKSVVLINSA 528 (599)
Q Consensus 499 vGh------------------S~Gg~ia~~~a~~~p~~v~~lvli~~~ 528 (599)
.|- .||..+|..++.+- ..++++...
T Consensus 191 t~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~G----a~V~~~~g~ 234 (390)
T TIGR00521 191 TAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRG----ADVTLITGP 234 (390)
T ss_pred ecCCccCCCCceeeecCCCcchHHHHHHHHHHHCC----CEEEEeCCC
Confidence 665 36677776666543 445666643
No 317
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=25.81 E-value=86 Score=30.33 Aligned_cols=31 Identities=32% Similarity=0.217 Sum_probs=25.1
Q ss_pred HHHHHhCCCCEEEEEeChHHHHHHHHHHhCC
Q 007536 486 DFTVEVVGEPVHLIGNSIGGYFVAIVACLWP 516 (599)
Q Consensus 486 ~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p 516 (599)
+.+.+.+...-.++|.|+|+.+|..+|...+
T Consensus 18 ~aL~e~g~~~d~i~GtS~GAl~aa~~a~~~~ 48 (215)
T cd07209 18 KALAEAGIEPDIISGTSIGAINGALIAGGDP 48 (215)
T ss_pred HHHHHcCCCCCEEEEECHHHHHHHHHHcCCc
Confidence 3355567777789999999999999998765
No 318
>COG3933 Transcriptional antiterminator [Transcription]
Probab=25.74 E-value=3.4e+02 Score=29.36 Aligned_cols=76 Identities=13% Similarity=0.058 Sum_probs=55.2
Q ss_pred CCeEEEECCCCCChHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCEEEEEeChHHH
Q 007536 427 GPAILLVHGFGAFLEHYRDNIYDIADGGNRVWAITLLGFGRSEKPNIVYTELMWSELLRDFTVEVVGEPVHLIGNSIGGY 506 (599)
Q Consensus 427 ~p~vlllHG~~~~~~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~lvGhS~Gg~ 506 (599)
-..||+.||...-+. ...++..|... --+.++|+| -..++.+..+.+.+.+++....+=.++=-+||..
T Consensus 109 v~vIiiAHG~sTASS-maevanrLL~~-~~~~aiDMP---------Ldvsp~~vle~l~e~~k~~~~~~GlllLVDMGSL 177 (470)
T COG3933 109 VKVIIIAHGYSTASS-MAEVANRLLGE-EIFIAIDMP---------LDVSPSDVLEKLKEYLKERDYRSGLLLLVDMGSL 177 (470)
T ss_pred eeEEEEecCcchHHH-HHHHHHHHhhc-cceeeecCC---------CcCCHHHHHHHHHHHHHhcCccCceEEEEecchH
Confidence 356888999865544 45677777775 458899998 2356778888888888888777745555789998
Q ss_pred HHHHHHH
Q 007536 507 FVAIVAC 513 (599)
Q Consensus 507 ia~~~a~ 513 (599)
..+.=..
T Consensus 178 ~~f~~~i 184 (470)
T COG3933 178 TSFGSII 184 (470)
T ss_pred HHHHHHH
Confidence 8765443
No 319
>TIGR02764 spore_ybaN_pdaB polysaccharide deacetylase family sporulation protein PdaB. This model describes the YbaN protein family, also called PdaB and SpoVIE, of Gram-positive bacteria. Although ybaN null mutants have only a mild sporulation defect, ybaN/ytrI double mutants show drastically reducted sporulation efficiencies. This synthetic defect suggests the role of this sigmaE-controlled gene in sporulation had been masked by functional redundancy. Members of this family are homologous to a characterized polysaccharide deacetylase; the exact function this protein family is unknown.
Probab=25.71 E-value=62 Score=30.52 Aligned_cols=33 Identities=18% Similarity=0.275 Sum_probs=25.3
Q ss_pred eEEEECC---CCCChHHHHHHHHHHHhCCCEEEEEc
Q 007536 429 AILLVHG---FGAFLEHYRDNIYDIADGGNRVWAIT 461 (599)
Q Consensus 429 ~vlllHG---~~~~~~~w~~~~~~l~~~g~~vi~~D 461 (599)
.||++|. ...+......+++.|.++||+++.++
T Consensus 153 ~Iil~Hd~~~~~~t~~~l~~~i~~l~~~Gy~~vtl~ 188 (191)
T TIGR02764 153 DIILLHASDSAKQTVKALPTIIKKLKEKGYEFVTIS 188 (191)
T ss_pred CEEEEeCCCCcHhHHHHHHHHHHHHHHCCCEEEEHH
Confidence 4899993 23345667788999999999998874
No 320
>cd04823 ALAD_PBGS_aspartate_rich Porphobilinogen synthase (PBGS), which is also called delta-aminolevulinic acid dehydratase (ALAD), catalyzes the condensation of two 5-aminolevulinic acid (ALA) molecules to form the pyrrole porphobilinogen (PBG), which is the second step in the biosynthesis of tetrapyrroles, such as heme, vitamin B12 and chlorophyll. This reaction involves the formation of a Schiff base link between the substrate and the enzyme. PBGSs are metalloenzymes, some of which have a second, allosteric metal binding site, beside the metal ion binding site in their active site. Although PBGS is a family of homologous enzymes, its metal ion utilization at catalytic site varies between zinc and magnesium and/or potassium. PBGS can be classified into two groups based on differences in their active site metal binding site. All of PBGS_aspartate_rich contain an aspartate rich metal binding site with the general sequence DXALDX(Y/F)X3G(H/Q)DG. They also contain an allosteric magnesiu
Probab=25.58 E-value=4.1e+02 Score=27.41 Aligned_cols=67 Identities=15% Similarity=0.107 Sum_probs=48.3
Q ss_pred cCCCCCCCCHHHHHHHhC------CCeEEEEEeCCcccc-c--CCHhHHHHHHHHHHHHHHHHHhcCCcEEEEEcC
Q 007536 52 KQDLRVDDHLGLVAASKY------QAVVPLYVFDHRILS-R--YSNEMLELVIFALEDLRKSLKEQGSDLMIRFGR 118 (599)
Q Consensus 52 rrDLRl~DN~aL~~A~~~------~~v~~vfi~d~~~~~-~--~~~~r~~Fl~~sL~~L~~~L~~~g~~L~v~~g~ 118 (599)
||-.|+.-|+++-.-.++ +-++|+||.+..... . .-+...+|=.+.|.+.-+++.++|++=+++.|-
T Consensus 1 ~R~RRlR~~~~~R~lv~Et~l~~~dlI~PlFv~e~~~~~~~I~smPg~~r~s~d~l~~~v~~~~~~Gi~~v~lFgv 76 (320)
T cd04823 1 TRPRRNRRTDALRRLVRETTLSPDDLILPLFVHEGENQREPIPSMPGVFRLSIDELLKEAEEAVDLGIPAVALFPV 76 (320)
T ss_pred CCCcccCCCHHHHHHHhcCCCCHHHceeeEEEecCCCCccccCCCCCceeeCHHHHHHHHHHHHHcCCCEEEEecC
Confidence 456788889999888654 358899999864322 1 123344455688888889999999999998886
No 321
>cd00384 ALAD_PBGS Porphobilinogen synthase (PBGS), which is also called delta-aminolevulinic acid dehydratase (ALAD), catalyzes the condensation of two 5-aminolevulinic acid (ALA) molecules to form the pyrrole porphobilinogen (PBG), which is the second step in the biosynthesis of tetrapyrroles, such as heme, vitamin B12 and chlorophyll. This reaction involves the formation of a Schiff base link between the substrate and the enzyme. PBGSs are metalloenzymes, some of which have a second, allosteric metal binding site, beside the metal ion binding site in their active site. Although PBGS is a family of homologous enzymes, its metal ion utilization at catalytic site varies between zinc and magnesium and/or potassium. PBGS can be classified into two groups based on differences in their active site metal binding site. They either contain a cysteine-rich zinc binding site (consensus DXCXCX(Y/F)X3G(H/Q)CG) or an aspartate-rich magnesium binding site (consensus DXALDX(Y/F)X3G(H/Q)DG). The cyste
Probab=24.79 E-value=4e+02 Score=27.44 Aligned_cols=64 Identities=19% Similarity=0.217 Sum_probs=45.9
Q ss_pred CCCCCHHHHHHHhC------CCeEEEEEeCCcccc-c--CCHhHHHHHHHHHHHHHHHHHhcCCcEEEEEcCH
Q 007536 56 RVDDHLGLVAASKY------QAVVPLYVFDHRILS-R--YSNEMLELVIFALEDLRKSLKEQGSDLMIRFGRV 119 (599)
Q Consensus 56 Rl~DN~aL~~A~~~------~~v~~vfi~d~~~~~-~--~~~~r~~Fl~~sL~~L~~~L~~~g~~L~v~~g~~ 119 (599)
|+.-|+++-.-.++ +-++|+||.+..... . .-+...+|=.+.|.+.-+++.++|++-+++.|-+
T Consensus 2 RlR~~~~~R~lv~Et~L~~~dLI~PlFV~eg~~~~~~I~sMPG~~r~s~d~l~~~~~~~~~~Gi~~v~LFgv~ 74 (314)
T cd00384 2 RLRRSPALRDLVRETRLSPDDLIYPLFVVEGIDEKEEISSMPGVYRLSVDSLVEEAEELADLGIRAVILFGIP 74 (314)
T ss_pred CCCCChHHHHHHHcCCCCHHHceeeEEEecCCCCccccCCCCCceeeCHHHHHHHHHHHHHCCCCEEEEECCC
Confidence 67778888777643 358899999864321 1 1233444556888888899999999999998875
No 322
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=24.52 E-value=1.2e+02 Score=33.83 Aligned_cols=47 Identities=19% Similarity=0.139 Sum_probs=41.1
Q ss_pred HHHHHHHHHHHHHhcCC-cEEEEEcCHHHHHHHHHHHhCCcEEEEccc
Q 007536 94 VIFALEDLRKSLKEQGS-DLMIRFGRVENVIRELVEEVKATSVFAEEE 140 (599)
Q Consensus 94 l~~sL~~L~~~L~~~g~-~L~v~~g~~~~~l~~l~~~~~~~~v~~~~~ 140 (599)
+.+++.++-++|++.|+ ++.+..|++......++++.+++.++.+..
T Consensus 363 l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~~~f~~~~ 410 (536)
T TIGR01512 363 PRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGIDEVHAELL 410 (536)
T ss_pred chHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCChhhhhccC
Confidence 55788888888999999 999999999999999999999998876543
No 323
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=24.51 E-value=95 Score=28.81 Aligned_cols=29 Identities=28% Similarity=0.068 Sum_probs=23.5
Q ss_pred HHHhCCCCEEEEEeChHHHHHHHHHHhCC
Q 007536 488 TVEVVGEPVHLIGNSIGGYFVAIVACLWP 516 (599)
Q Consensus 488 l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p 516 (599)
+.+.+...-.++|-|.|+.+|..++..++
T Consensus 22 L~e~g~~~d~i~GtSaGAi~aa~~a~g~~ 50 (175)
T cd07228 22 LEEEGIEIDIIAGSSIGALVGALYAAGHL 50 (175)
T ss_pred HHHCCCCeeEEEEeCHHHHHHHHHHcCCC
Confidence 44556677889999999999999988654
No 324
>cd07211 Pat_PNPLA8 Patatin-like phospholipase domain containing protein 8. PNPLA8 is a Ca-independent myocardial phospholipase which maintains mitochondrial integrity. PNPLA8 is also known as iPLA2-gamma. In humans, it is predominantly expressed in heart tissue. iPLA2-gamma can catalyze both phospholipase A1 and A2 reactions (PLA1 and PLA2 respectively). This family includes PNPLA8 (iPLA2-gamma) from Homo sapiens and iPLA2-2 from Mus musculus.
Probab=24.43 E-value=1.6e+02 Score=30.18 Aligned_cols=17 Identities=18% Similarity=0.301 Sum_probs=15.2
Q ss_pred EEEEeChHHHHHHHHHH
Q 007536 497 HLIGNSIGGYFVAIVAC 513 (599)
Q Consensus 497 ~lvGhS~Gg~ia~~~a~ 513 (599)
.++|-|.||.+|+.++.
T Consensus 44 li~GTStGgiiA~~la~ 60 (308)
T cd07211 44 YICGVSTGAILAFLLGL 60 (308)
T ss_pred EEEecChhHHHHHHHhc
Confidence 48899999999999876
No 325
>PF00578 AhpC-TSA: AhpC/TSA family; InterPro: IPR000866 Peroxiredoxins (Prxs) are a ubiquitous family of antioxidant enzymes that also control cytokine-induced peroxide levels which mediate signal transduction in mammalian cells. Prxs can be regulated by changes to phosphorylation, redox and possibly oligomerisation states. Prxs are divided into three classes: typical 2-Cys Prxs; atypical 2-Cys Prxs; and 1-Cys Prxs. All Prxs share the same basic catalytic mechanism, in which an active-site cysteine (the peroxidatic cysteine) is oxidised to a sulphenic acid by the peroxide substrate. The recycling of the sulphenic acid back to a thiol is what distinguishes the three enzyme classes. Using crystal structures, a detailed catalytic cycle has been derived for typical 2-Cys Prxs, including a model for the redox-regulated oligomeric state proposed to control enzyme activity []. Alkyl hydroperoxide reductase (AhpC) is responsible for directly reducing organic hyperoxides in its reduced dithiol form. Thiol specific antioxidant (TSA) is a physiologically important antioxidant which constitutes an enzymatic defence against sulphur-containing radicals. This family contains AhpC and TSA, as well as related proteins.; GO: 0016209 antioxidant activity, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1QMV_A 1PRX_B 3HJP_C 3HA9_A 2V41_G 2V32_C 2V2G_C 3LWA_A 3IA1_B 1ZYE_G ....
Probab=24.35 E-value=2.2e+02 Score=24.00 Aligned_cols=65 Identities=17% Similarity=0.230 Sum_probs=45.9
Q ss_pred CCeEEEEEeCCcccccCCHhHHHHHHHHHHHHHHHHHhcCCcEEEEEcCHHHHHHHHHHHhCCc-EEEEcc
Q 007536 70 QAVVPLYVFDHRILSRYSNEMLELVIFALEDLRKSLKEQGSDLMIRFGRVENVIRELVEEVKAT-SVFAEE 139 (599)
Q Consensus 70 ~~v~~vfi~d~~~~~~~~~~r~~Fl~~sL~~L~~~L~~~g~~L~v~~g~~~~~l~~l~~~~~~~-~v~~~~ 139 (599)
+..+.++++... ..+.... .+..|.++.+++++.|+.++.+.-++.+.+.++.++++.. .++++.
T Consensus 25 gk~~vl~f~~~~----~c~~c~~-~l~~l~~~~~~~~~~~~~vi~is~d~~~~~~~~~~~~~~~~~~~~D~ 90 (124)
T PF00578_consen 25 GKPVVLFFWPTA----WCPFCQA-ELPELNELYKKYKDKGVQVIGISTDDPEEIKQFLEEYGLPFPVLSDP 90 (124)
T ss_dssp TSEEEEEEESTT----TSHHHHH-HHHHHHHHHHHHHTTTEEEEEEESSSHHHHHHHHHHHTCSSEEEEET
T ss_pred CCcEEEEEeCcc----Ccccccc-chhHHHHHhhhhccceEEeeecccccccchhhhhhhhccccccccCc
Confidence 344555555431 2334443 3366899999999999999999989988999999998866 555653
No 326
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=24.02 E-value=4.4e+02 Score=28.28 Aligned_cols=96 Identities=13% Similarity=0.113 Sum_probs=53.0
Q ss_pred CCeEEEECCCCCCh---HHHHHHHHHHHhCCCEEEEEcCCCC---CCCCCCCCCCCHHHHHHHHHHHHHH--hCCCCEEE
Q 007536 427 GPAILLVHGFGAFL---EHYRDNIYDIADGGNRVWAITLLGF---GRSEKPNIVYTELMWSELLRDFTVE--VVGEPVHL 498 (599)
Q Consensus 427 ~p~vlllHG~~~~~---~~w~~~~~~l~~~g~~vi~~D~~G~---G~S~~~~~~~~~~~~~~~l~~~l~~--l~~~~~~l 498 (599)
+.|||+++.+.... ......+..|.+.|+.|+-++ +|+ |.... ....+.+.....+...+.. +...++.+
T Consensus 116 ~~pvvi~Pamn~~m~~~p~~~~Nl~~L~~~G~~ii~P~-~g~la~~~~g~-gr~~~~~~I~~~~~~~~~~~~l~gk~vlI 193 (399)
T PRK05579 116 TAPVLVAPAMNTQMWENPATQRNLATLRSRGVEIIGPA-SGRLACGDVGP-GRMAEPEEIVAAAERALSPKDLAGKRVLI 193 (399)
T ss_pred CCCEEEEeCCChhHcCCHHHHHHHHHHHHCCCEEECCC-CccccCCCcCC-CCCCCHHHHHHHHHHHhhhcccCCCEEEE
Confidence 35667776553221 224566788888899887554 444 33222 1234566666666665532 34456666
Q ss_pred EEe---------------C---hHHHHHHHHHHhCCcccceEEEEcCC
Q 007536 499 IGN---------------S---IGGYFVAIVACLWPAVVKSVVLINSA 528 (599)
Q Consensus 499 vGh---------------S---~Gg~ia~~~a~~~p~~v~~lvli~~~ 528 (599)
.|- | ||..+|..++.+- ..+++++..
T Consensus 194 TgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~G----a~V~~v~~~ 237 (399)
T PRK05579 194 TAGPTREPIDPVRYITNRSSGKMGYALARAAARRG----ADVTLVSGP 237 (399)
T ss_pred eCCCccccccceeeeccCCcchHHHHHHHHHHHCC----CEEEEeCCC
Confidence 665 3 4555665555432 346666643
No 327
>COG2830 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=23.86 E-value=62 Score=29.84 Aligned_cols=82 Identities=16% Similarity=0.112 Sum_probs=54.8
Q ss_pred CeEEEECCCCCChHHHHHHHHHHHhCCC-EEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCEEEEEeChHHH
Q 007536 428 PAILLVHGFGAFLEHYRDNIYDIADGGN-RVWAITLLGFGRSEKPNIVYTELMWSELLRDFTVEVVGEPVHLIGNSIGGY 506 (599)
Q Consensus 428 p~vlllHG~~~~~~~w~~~~~~l~~~g~-~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~lvGhS~Gg~ 506 (599)
..||..-|+|........++- ..++ -++++|+..... .++.. + -+.+.||++|||-.
T Consensus 12 ~LIvyFaGwgtpps~v~HLil---peN~dl~lcYDY~dl~l------dfDfs-------A------y~hirlvAwSMGVw 69 (214)
T COG2830 12 HLIVYFAGWGTPPSAVNHLIL---PENHDLLLCYDYQDLNL------DFDFS-------A------YRHIRLVAWSMGVW 69 (214)
T ss_pred EEEEEEecCCCCHHHHhhccC---CCCCcEEEEeehhhcCc------ccchh-------h------hhhhhhhhhhHHHH
Confidence 478888999998877665432 2234 466778764332 11111 1 14567899999999
Q ss_pred HHHHHHHhCCcccceEEEEcCCCCCCC
Q 007536 507 FVAIVACLWPAVVKSVVLINSAGNVIP 533 (599)
Q Consensus 507 ia~~~a~~~p~~v~~lvli~~~~~~~~ 533 (599)
+|-.+.... +.++.+.|++++.+..
T Consensus 70 vAeR~lqg~--~lksatAiNGTgLpcD 94 (214)
T COG2830 70 VAERVLQGI--RLKSATAINGTGLPCD 94 (214)
T ss_pred HHHHHHhhc--cccceeeecCCCCCcc
Confidence 998887665 4788899998876554
No 328
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=23.85 E-value=1.2e+02 Score=25.56 Aligned_cols=40 Identities=25% Similarity=0.331 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHHHHhcCCcEEEEEcCHHHHHHHHHHHhCC
Q 007536 93 LVIFALEDLRKSLKEQGSDLMIRFGRVENVIRELVEEVKA 132 (599)
Q Consensus 93 Fl~~sL~~L~~~L~~~g~~L~v~~g~~~~~l~~l~~~~~~ 132 (599)
-+.+++.++-++|++.|..+.+..+.....+..+++..++
T Consensus 24 ~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~ 63 (139)
T cd01427 24 ELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGL 63 (139)
T ss_pred CcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCC
Confidence 4557777777888888999999999988888888888766
No 329
>PRK11175 universal stress protein UspE; Provisional
Probab=23.72 E-value=5.8e+02 Score=25.61 Aligned_cols=85 Identities=12% Similarity=0.019 Sum_probs=49.7
Q ss_pred CCCCHHHHHHHh----C-CCeEEEEEeCCcccc---cC--CHh---HHHHH---HHHHHHHHHHHHhcCCcEE--EE-Ec
Q 007536 57 VDDHLGLVAASK----Y-QAVVPLYVFDHRILS---RY--SNE---MLELV---IFALEDLRKSLKEQGSDLM--IR-FG 117 (599)
Q Consensus 57 l~DN~aL~~A~~----~-~~v~~vfi~d~~~~~---~~--~~~---r~~Fl---~~sL~~L~~~L~~~g~~L~--v~-~g 117 (599)
-.+..||.+|+. . ..+..++++++.... .. ... +.... .+.|.+..+.++..|++.. +. .|
T Consensus 14 ~~~~~al~~a~~lA~~~~a~l~ll~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~g 93 (305)
T PRK11175 14 QDDQPALRRAVYLAQRNGGKITAFLPIYDFSYEMTTLLSPDEREAMRQGVISQRTAWIREQAKPYLDAGIPIEIKVVWHN 93 (305)
T ss_pred ccccHHHHHHHHHHHhcCCCEEEEEeccCchhhhhcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCceEEEEecCC
Confidence 356788888863 2 467777766432111 00 110 11111 2234444445555676643 33 58
Q ss_pred CHHHHHHHHHHHhCCcEEEEcccc
Q 007536 118 RVENVIRELVEEVKATSVFAEEEV 141 (599)
Q Consensus 118 ~~~~~l~~l~~~~~~~~v~~~~~~ 141 (599)
++.+.+.+.+++.+++-|+....-
T Consensus 94 ~~~~~i~~~a~~~~~DLiV~G~~~ 117 (305)
T PRK11175 94 RPFEAIIQEVIAGGHDLVVKMTHQ 117 (305)
T ss_pred CcHHHHHHHHHhcCCCEEEEeCCC
Confidence 999999999999999998887653
No 330
>PRK14719 bifunctional RNAse/5-amino-6-(5-phosphoribosylamino)uracil reductase; Provisional
Probab=23.55 E-value=1.8e+02 Score=30.80 Aligned_cols=58 Identities=12% Similarity=0.029 Sum_probs=35.3
Q ss_pred HHHhcCC--cEEEEEcCHHHHHHHHHHHhCCcEEEEccccChhHHHHHHHHHHHHHhccc
Q 007536 104 SLKEQGS--DLMIRFGRVENVIRELVEEVKATSVFAEEEVEYHLRQMMAIVDETLAKVSL 161 (599)
Q Consensus 104 ~L~~~g~--~L~v~~g~~~~~l~~l~~~~~~~~v~~~~~~~~~~~~~d~~v~~~l~~~gi 161 (599)
+|+++|+ ..+.+.+.|.....+.+-+.++..|+.-.++.+..+..-.++.+.|++.||
T Consensus 37 ~l~~lgi~g~~i~~s~~p~~~cad~ii~~gi~rVVi~~D~d~~G~~~~~~~~~~L~~aGi 96 (360)
T PRK14719 37 SLKNLKINANFITVSNTPVFQIADDLIAENISEVILLTDFDRAGRVYAKNIMEEFQSRGI 96 (360)
T ss_pred HHHHcCCCCcEEEEeCCchHHHHHHHHHcCCCEEEEEECCCCCCCccchHHHHHHHHCCC
Confidence 5667777 355556666554444444457776665556666544444466777887776
No 331
>TIGR00591 phr2 photolyase PhrII. All proteins in this family for which functions are known are DNA-photolyases used for the direct repair of UV irradiation induced DNA damage. Some repair 6-4 photoproducts while others repair cyclobutane pyrimidine dimers. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=23.06 E-value=44 Score=36.52 Aligned_cols=56 Identities=14% Similarity=0.033 Sum_probs=34.1
Q ss_pred hhhhcccchhhHHHHHhhhcccccccCCCCCCCCccccCCCccccCCCCccccChHHHHHHHHH
Q 007536 240 WTLINNMSAETILTDKLSKLGKRSKRNLNNQHSPRKRLDKSFFVTDKGNTVGGGTNAVLNALQA 303 (599)
Q Consensus 240 ~~~~g~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gGe~~A~~~L~~ 303 (599)
|.++|+++|+++|++|++. .+.+|...++.+.. ..++.+|+++..|+..+++.+..
T Consensus 221 ~~~gGe~aA~~~L~~F~~~-~l~~Y~~~Rn~p~~-------~~tS~LSPyL~~G~IS~R~i~~~ 276 (454)
T TIGR00591 221 WAKPGTTAGLIMLESFIEK-RLCFFRTRRNDPNN-------DALSMLSPWLHFGQLSAQRAARA 276 (454)
T ss_pred CCCCcHHHHHHHHHHHHHH-HHHHHHHhcCCccc-------ccccccchHHhcCcccHHHHHHH
Confidence 5466999999999999974 56677777765311 12344444444444444444433
No 332
>PLN02954 phosphoserine phosphatase
Probab=23.00 E-value=1e+02 Score=29.58 Aligned_cols=44 Identities=20% Similarity=0.391 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHHHhcCCcEEEEEcCHHHHHHHHHHHhCCc--EEEE
Q 007536 94 VIFALEDLRKSLKEQGSDLMIRFGRVENVIRELVEEVKAT--SVFA 137 (599)
Q Consensus 94 l~~sL~~L~~~L~~~g~~L~v~~g~~~~~l~~l~~~~~~~--~v~~ 137 (599)
++.++.++-+.|++.|+++.|..+.....+..+++.+++. .++.
T Consensus 85 l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~ 130 (224)
T PLN02954 85 LSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFA 130 (224)
T ss_pred CCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEE
Confidence 4467777888888888888888888888788888887775 3543
No 333
>COG0218 Predicted GTPase [General function prediction only]
Probab=22.62 E-value=96 Score=29.74 Aligned_cols=15 Identities=27% Similarity=0.634 Sum_probs=8.8
Q ss_pred EEEEcCCCCCCCCCC
Q 007536 457 VWAITLLGFGRSEKP 471 (599)
Q Consensus 457 vi~~D~~G~G~S~~~ 471 (599)
...+|+||||+...+
T Consensus 72 ~~lVDlPGYGyAkv~ 86 (200)
T COG0218 72 LRLVDLPGYGYAKVP 86 (200)
T ss_pred EEEEeCCCcccccCC
Confidence 455666666665443
No 334
>PF03610 EIIA-man: PTS system fructose IIA component; InterPro: IPR004701 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS) [, ] is a major carbohydrate transport system in bacteria. The PTS catalyses the phosphorylation of incoming sugar substrates and coupled with translocation across the cell membrane, makes the PTS a link between the uptake and metabolism of sugars. The general mechanism of the PTS is the following: a phosphoryl group from phosphoenolpyruvate (PEP) is transferred via a signal transduction pathway, to enzyme I (EI) which in turn transfers it to a phosphoryl carrier, the histidine protein (HPr). Phospho-HPr then transfers the phosphoryl group to a sugar-specific permease, a membrane-bound complex known as enzyme 2 (EII), which transports the sugar to the cell. EII consists of at least three structurally distinct domains IIA, IIB and IIC []. These can either be fused together in a single polypeptide chain or exist as two or three interactive chains, formerly called enzymes II (EII) and III (EIII). The first domain (IIA or EIIA) carries the first permease-specific phosphorylation site, a histidine which is phosphorylated by phospho-HPr. The second domain (IIB or EIIB) is phosphorylated by phospho-IIA on a cysteinyl or histidyl residue, depending on the sugar transported. Finally, the phosphoryl group is transferred from the IIB domain to the sugar substrate concomitantly with the sugar uptake processed by the IIC domain. This third domain (IIC or EIIC) forms the translocation channel and the specific substrate-binding site. An additional transmembrane domain IID, homologous to IIC, can be found in some PTSs, e.g. for mannose [, , , ]. The Man family is unique in several respects among PTS permease families. It is the only PTS family in which members possess a IID protein. It is the only PTS family in which the IIB constituent is phosphorylated on a histidyl rather than a cysteyl residue. Its permease members exhibit broad specificity for a range of sugars, rather than being specific for just one or a few sugars. The mannose permease of Escherichia coli, for example, can transport and phosphorylate glucose, mannose, fructose, glucosamine, N-acetylglucosamine, and other sugars. Other members of this can transport sorbose, fructose and N-acetylglucosamine. This family is specific for IIA and IIB components.; GO: 0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system, 0016021 integral to membrane; PDB: 3GDW_B 2JZN_A 1VSQ_A 2JZO_B 1VRC_A 1PDO_A 3GX1_A 3B48_B 3BED_B 3IPR_C ....
Probab=22.54 E-value=4.8e+02 Score=22.13 Aligned_cols=73 Identities=19% Similarity=0.154 Sum_probs=46.4
Q ss_pred eEEEECCCCCChHHHHHHHHHHHhC-CCEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC-CCEEEEEeChHHH
Q 007536 429 AILLVHGFGAFLEHYRDNIYDIADG-GNRVWAITLLGFGRSEKPNIVYTELMWSELLRDFTVEVVG-EPVHLIGNSIGGY 506 (599)
Q Consensus 429 ~vlllHG~~~~~~~w~~~~~~l~~~-g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~-~~~~lvGhS~Gg~ 506 (599)
.||.-|| .-.......++.+... ...+.++++.- .-+.+.+.+.+.+.++.... +.++++. +++|.
T Consensus 2 iii~sHG--~~A~g~~~~~~~i~G~~~~~i~~~~~~~---------~~~~~~~~~~l~~~i~~~~~~~~vlil~-Dl~gg 69 (116)
T PF03610_consen 2 IIIASHG--SLAEGLLESAEMILGEDQDNIEAVDLYP---------DESIEDFEEKLEEAIEELDEGDGVLILT-DLGGG 69 (116)
T ss_dssp EEEEEET--THHHHHHHHHHHHHTSTCSSEEEEEETT---------TSCHHHHHHHHHHHHHHCCTTSEEEEEE-SSTTS
T ss_pred EEEEECc--HHHHHHHHHHHHHcCCCcccEEEEECcC---------CCCHHHHHHHHHHHHHhccCCCcEEEEe-eCCCC
Confidence 3677799 5555666777777765 34677776541 23677888889999988764 5565555 44444
Q ss_pred HHHHHHH
Q 007536 507 FVAIVAC 513 (599)
Q Consensus 507 ia~~~a~ 513 (599)
.....+.
T Consensus 70 sp~n~a~ 76 (116)
T PF03610_consen 70 SPFNEAA 76 (116)
T ss_dssp HHHHHHH
T ss_pred ccchHHH
Confidence 4444443
No 335
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=22.42 E-value=1.3e+02 Score=28.77 Aligned_cols=37 Identities=14% Similarity=0.279 Sum_probs=23.8
Q ss_pred HHHHHHHHHHHHHhcCCcEEEEEcCHHHHHHHHHHHh
Q 007536 94 VIFALEDLRKSLKEQGSDLMIRFGRVENVIRELVEEV 130 (599)
Q Consensus 94 l~~sL~~L~~~L~~~g~~L~v~~g~~~~~l~~l~~~~ 130 (599)
+..++.++-+.|++.|+++.|..+.....+..+++.+
T Consensus 71 l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~ 107 (214)
T TIGR03333 71 IREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGI 107 (214)
T ss_pred ccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhh
Confidence 4456666666667777777777776666666555554
No 336
>TIGR02816 pfaB_fam PfaB family protein. The protein PfaB is part of four gene locus, similar to polyketide biosynthesis systems, responsible for omega-3 polyunsaturated fatty acid biosynthesis in several high pressure and/or cold-adapted bacteria. The fairly permissive trusted cutoff set for this model allows detection of homologs encoded near homologs to other proteins of the locus: PfaA, PfaC, and/or PfaD. The likely role in every case is either polyunsaturated fatty acid or polyketide biosynthesis.
Probab=22.32 E-value=89 Score=34.94 Aligned_cols=32 Identities=22% Similarity=0.255 Sum_probs=24.4
Q ss_pred HHHHH-HHhCCCCEEEEEeChHHHHHHHHHHhC
Q 007536 484 LRDFT-VEVVGEPVHLIGNSIGGYFVAIVACLW 515 (599)
Q Consensus 484 l~~~l-~~l~~~~~~lvGhS~Gg~ia~~~a~~~ 515 (599)
+.+++ +.+++.+-.++|||+|=+.|+..|.-.
T Consensus 254 La~ll~~~~GI~Pdav~GHSlGE~aAa~aAGvl 286 (538)
T TIGR02816 254 LTQLLCDEFAIKPDFALGYSKGEASMWASLGVW 286 (538)
T ss_pred HHHHHHHhcCCCCCEEeecCHHHHHHHHHhCCC
Confidence 33445 478889999999999988887776543
No 337
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=22.05 E-value=7.4 Score=38.78 Aligned_cols=101 Identities=14% Similarity=0.030 Sum_probs=58.9
Q ss_pred CCeEEEECCCCCChHHHHHH-HHHHHhCCCEEEEEcCCCCCCCCCCCCC----CCHHHHHHHHHHHHHHhCCCCEEEEEe
Q 007536 427 GPAILLVHGFGAFLEHYRDN-IYDIADGGNRVWAITLLGFGRSEKPNIV----YTELMWSELLRDFTVEVVGEPVHLIGN 501 (599)
Q Consensus 427 ~p~vlllHG~~~~~~~w~~~-~~~l~~~g~~vi~~D~~G~G~S~~~~~~----~~~~~~~~~l~~~l~~l~~~~~~lvGh 501 (599)
+..++..||...+......+ ...+...++.++..|+++++.|..+... .+.......+..........+++++|.
T Consensus 88 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 167 (299)
T COG1073 88 GESGGDPRGLADSEGYAEDFSAAVLLLLSEGVLDKDYRLLGASLGPRILAGLSLGGPSAGALLAWGPTRLDASRIVVWGE 167 (299)
T ss_pred cccccccccccCccccccccchhheeeeccccccHHHHHHhhhcCcceEEEEEeeccchHHHhhcchhHHHhhcccceee
Confidence 56678888876555433333 3444445688999999999998644321 111112222222211233468999999
Q ss_pred ChHHHHHHHHHHh----CCcccceEEEEcC
Q 007536 502 SIGGYFVAIVACL----WPAVVKSVVLINS 527 (599)
Q Consensus 502 S~Gg~ia~~~a~~----~p~~v~~lvli~~ 527 (599)
|+||..++..... .++.+..++.-++
T Consensus 168 s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (299)
T COG1073 168 SLGGALALLLLGANPELARELIDYLITPGG 197 (299)
T ss_pred ccCceeeccccccchHHHHhhhhhhccCCC
Confidence 9999999886654 2344444444443
No 338
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=21.97 E-value=2.2e+02 Score=26.61 Aligned_cols=56 Identities=14% Similarity=0.334 Sum_probs=39.3
Q ss_pred HHHHHHHHHHHhcCCcEEEEEcCHHHHHHHHHHHhCCcEEEEccccChhHHHHHHHHHHHHHhccc
Q 007536 96 FALEDLRKSLKEQGSDLMIRFGRVENVIRELVEEVKATSVFAEEEVEYHLRQMMAIVDETLAKVSL 161 (599)
Q Consensus 96 ~sL~~L~~~L~~~g~~L~v~~g~~~~~l~~l~~~~~~~~v~~~~~~~~~~~~~d~~v~~~l~~~gi 161 (599)
.++..| ++.|+++.|..|.+...+..+++++++..++...+. -...+.+.+++.|+
T Consensus 55 ~~i~~L----~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~~f~g~~~------k~~~l~~~~~~~gl 110 (183)
T PRK09484 55 YGIRCL----LTSGIEVAIITGRKSKLVEDRMTTLGITHLYQGQSN------KLIAFSDLLEKLAI 110 (183)
T ss_pred HHHHHH----HHCCCEEEEEeCCCcHHHHHHHHHcCCceeecCCCc------HHHHHHHHHHHhCC
Confidence 355555 457999999999999999999999999877753221 12455666665543
No 339
>PRK13384 delta-aminolevulinic acid dehydratase; Provisional
Probab=21.76 E-value=1.9e+02 Score=29.74 Aligned_cols=68 Identities=16% Similarity=0.179 Sum_probs=49.6
Q ss_pred cCCCCCCCCHHHHHHHhC------CCeEEEEEeCCcccc-cC--CHhHHHHHHHHHHHHHHHHHhcCCcEEEEEcCH
Q 007536 52 KQDLRVDDHLGLVAASKY------QAVVPLYVFDHRILS-RY--SNEMLELVIFALEDLRKSLKEQGSDLMIRFGRV 119 (599)
Q Consensus 52 rrDLRl~DN~aL~~A~~~------~~v~~vfi~d~~~~~-~~--~~~r~~Fl~~sL~~L~~~L~~~g~~L~v~~g~~ 119 (599)
+|--|+.-|+++-..+++ +-++|+||.+..... .. -+-..+|=.+.|.+.-+++.++|++-+++.|-+
T Consensus 8 ~R~RRlR~~~~~R~lv~Et~l~~~dLI~PlFV~eg~~~~~~I~smPg~~r~sid~l~~~~~~~~~~Gi~~v~lFgv~ 84 (322)
T PRK13384 8 RRLRRLRRSEAMRDLVRETEVSLSDLIYPIFIEEHITDAVPISTLPGISRLPESALADEIERLYALGIRYVMPFGIS 84 (322)
T ss_pred cCCCcCCCCHHHHHHHhcCCCCHHHceeeEEEecCCCCceecCCCCCcceECHHHHHHHHHHHHHcCCCEEEEeCCC
Confidence 577788889888887654 358899999864321 11 133444556888888889999999999998875
No 340
>COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism]
Probab=21.67 E-value=2.1e+02 Score=27.10 Aligned_cols=55 Identities=11% Similarity=0.070 Sum_probs=36.0
Q ss_pred CCCeEEEECCCCCChHH--HHHHHHHHHhCCCEEEEEcCC--CCCCCCCCCCCCCHHHHHH
Q 007536 426 EGPAILLVHGFGAFLEH--YRDNIYDIADGGNRVWAITLL--GFGRSEKPNIVYTELMWSE 482 (599)
Q Consensus 426 ~~p~vlllHG~~~~~~~--w~~~~~~l~~~g~~vi~~D~~--G~G~S~~~~~~~~~~~~~~ 482 (599)
.++.||++-|+.++... =..+.+.|.+.|++++.+|-- -||.+.. -.++.++-.+
T Consensus 21 ~~~~viW~TGLSGsGKSTiA~ale~~L~~~G~~~y~LDGDnvR~gL~~d--LgFs~edR~e 79 (197)
T COG0529 21 QKGAVIWFTGLSGSGKSTIANALEEKLFAKGYHVYLLDGDNVRHGLNRD--LGFSREDRIE 79 (197)
T ss_pred CCCeEEEeecCCCCCHHHHHHHHHHHHHHcCCeEEEecChhHhhcccCC--CCCChHHHHH
Confidence 36789999999888654 234567788889999999842 2454422 2344444433
No 341
>PRK10674 deoxyribodipyrimidine photolyase; Provisional
Probab=21.54 E-value=44 Score=36.77 Aligned_cols=56 Identities=20% Similarity=0.143 Sum_probs=37.0
Q ss_pred hcccchhhHHHHHhhhcccccccCCCCCCCCccccCCCccccCCCCccccChHHHHHHHHHHHHhhccCccchHHHHHH
Q 007536 243 INNMSAETILTDKLSKLGKRSKRNLNNQHSPRKRLDKSFFVTDKGNTVGGGTNAVLNALQAYLRYLEGTVRDDWQELQE 321 (599)
Q Consensus 243 ~g~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gGe~~A~~~L~~fl~~~~~~~~~~Y~~~rn 321 (599)
+|+++|+++|++|++. .+.+|...++.+. ..|. .+|+.||++|+.+...-|.+.++
T Consensus 203 gGe~~A~~~L~~f~~~-~l~~Y~~~r~~p~------------------~~~t----S~LSPyL~~G~iS~r~v~~~~~~ 258 (472)
T PRK10674 203 VGEKAAIAQLRQFCQQ-GAGEYEQQRDFPA------------------VDGT----SRLSAYLATGVLSPRQCLHRLLA 258 (472)
T ss_pred CCHHHHHHHHHHHHHH-HHHHhccccCCCC------------------ccCC----CCcChhhccCcCCHHHHHHHHHH
Confidence 4889999999999974 3555555554321 1111 36777777777777777777654
No 342
>TIGR02884 spore_pdaA delta-lactam-biosynthetic de-N-acetylase. Muramic delta-lactam is an unusual constituent of peptidoglycan, found only in bacterial spores in the peptidoglycan wall, or spore cortex. The proteins in this family are PdaA (yfjS), a member of a larger family of polysaccharide deacetylases, and are specificially involved in delta-lactam biosynthesis. PdaA acts immediately after CwlD, an N-acetylmuramoyl-L-alanine amidase and performs a de-N-acetylation. PdaA may also perform the following transpeptidation for lactam ring formation, as heterologous expression in E. coli of CwlD and PdaA together is sufficient for delta-lactam production.
Probab=21.40 E-value=1.1e+02 Score=29.90 Aligned_cols=34 Identities=26% Similarity=0.314 Sum_probs=27.6
Q ss_pred CeEEEECCC-CCChHHHHHHHHHHHhCCCEEEEEc
Q 007536 428 PAILLVHGF-GAFLEHYRDNIYDIADGGNRVWAIT 461 (599)
Q Consensus 428 p~vlllHG~-~~~~~~w~~~~~~l~~~g~~vi~~D 461 (599)
..||++|.. ..+......+++.|.++||+++.++
T Consensus 187 g~IiLlHd~~~~t~~aL~~ii~~lk~~Gy~fvtl~ 221 (224)
T TIGR02884 187 GAILLLHAVSKDNAEALDKIIKDLKEQGYTFKSLD 221 (224)
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEhH
Confidence 468999975 4556778889999999999998875
No 343
>TIGR02873 spore_ylxY probable sporulation protein, polysaccharide deacetylase family. Members of this protein family are most closely related to TIGR02764, a subset of polysaccharide deacetylase family proteins found in a species if and only if the species forms endospores like those of Bacillus subtilis or Clostridium tetani. This family is likewise restricted to spore-formers, but is not universal among them in having sequences with full-length matches to the model.
Probab=21.37 E-value=1.1e+02 Score=30.82 Aligned_cols=34 Identities=26% Similarity=0.306 Sum_probs=28.6
Q ss_pred CeEEEECCCCCChHHHHHHHHHHHhCCCEEEEEc
Q 007536 428 PAILLVHGFGAFLEHYRDNIYDIADGGNRVWAIT 461 (599)
Q Consensus 428 p~vlllHG~~~~~~~w~~~~~~l~~~g~~vi~~D 461 (599)
..||++|-...+......+++.|.++||+++.++
T Consensus 231 G~IILmHd~~~T~~aL~~iI~~Lk~kGy~fvtl~ 264 (268)
T TIGR02873 231 GAMVLMHPTASSTEGLEEMITIIKEKGYKIGTIT 264 (268)
T ss_pred CcEEEEcCCccHHHHHHHHHHHHHHCCCEEEeHH
Confidence 3588999877777788889999999999998874
No 344
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=21.28 E-value=3.4e+02 Score=32.62 Aligned_cols=38 Identities=18% Similarity=0.176 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHhcCCcEEEEEcCHHHHHHHHHHHhCCc
Q 007536 96 FALEDLRKSLKEQGSDLMIRFGRVENVIRELVEEVKAT 133 (599)
Q Consensus 96 ~sL~~L~~~L~~~g~~L~v~~g~~~~~l~~l~~~~~~~ 133 (599)
+...+.-++|++.|++.+++.||.......++++.++.
T Consensus 553 ~~a~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~lGI~ 590 (903)
T PRK15122 553 ESAAPAIAALRENGVAVKVLTGDNPIVTAKICREVGLE 590 (903)
T ss_pred HHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCC
Confidence 56677777889999999999999999999999999986
No 345
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=21.26 E-value=4.5e+02 Score=26.47 Aligned_cols=22 Identities=32% Similarity=0.493 Sum_probs=19.3
Q ss_pred CCCEEEEEeChHHHHHHHHHHh
Q 007536 493 GEPVHLIGNSIGGYFVAIVACL 514 (599)
Q Consensus 493 ~~~~~lvGhS~Gg~ia~~~a~~ 514 (599)
.+++.++|+|=|+..|-.+|..
T Consensus 91 gd~I~lfGFSRGA~~AR~~a~~ 112 (277)
T PF09994_consen 91 GDRIYLFGFSRGAYTARAFANM 112 (277)
T ss_pred cceEEEEecCccHHHHHHHHHH
Confidence 3789999999999999888864
No 346
>PF08218 Citrate_ly_lig: Citrate lyase ligase C-terminal domain; InterPro: IPR013166 [Citrate (pro-3S)-lyase] ligase (6.2.1.22 from EC), also known as citrate lyase ligase, is responsible for acetylation of the prosthetic group (2-(5''-phosphoribosyl)-3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase. It converts the inactive thiol form of the enzyme to the active form. In Clostridium sphenoides, citrate lyase ligase actively degrades citrate. In Clostridium sporosphaeroides and Lactococcus lactis, however, the enzyme is under stringent regulatory control. The enzyme's activity in anaerobic bacteria is modulated by phosphorylation and dephosphorylation []. The proteins in this entry represent the C-terminal domain of citrate lyase ligase.; GO: 0008771 [citrate (pro-3S)-lyase] ligase activity
Probab=21.15 E-value=3.3e+02 Score=25.67 Aligned_cols=103 Identities=17% Similarity=0.126 Sum_probs=63.4
Q ss_pred HHHHhCCCeEEEEEeCCcccccCCHhHHHHHHHHHHHHHHHHHhcCCcEEEEE---------c-CH---------HHHHH
Q 007536 64 VAASKYQAVVPLYVFDHRILSRYSNEMLELVIFALEDLRKSLKEQGSDLMIRF---------G-RV---------ENVIR 124 (599)
Q Consensus 64 ~~A~~~~~v~~vfi~d~~~~~~~~~~r~~Fl~~sL~~L~~~L~~~g~~L~v~~---------g-~~---------~~~l~ 124 (599)
..|++....+-||++..+...-.-.-|...+.+|..+|.+=----|++.+|-. . +. ...+.
T Consensus 20 E~Aa~~~d~l~vFVV~eD~S~Fpf~~R~~LVk~G~~~L~NV~V~~~g~YiIS~aTFPsYFlK~~~~~~~~~~~lD~~iF~ 99 (182)
T PF08218_consen 20 EQAAKECDWLHVFVVSEDRSLFPFADRYELVKEGTADLPNVTVHPGGDYIISSATFPSYFLKDEDDVIKAQAELDATIFK 99 (182)
T ss_pred HHHHHhCCEEEEEEEccccCcCCHHHHHHHHHHHhCcCCCEEEEcCCCeeeecccChhhhccchhHHHHHHHHHHHHHHH
Confidence 45666667888898887643212345788899999888553333355555431 1 11 11334
Q ss_pred H-HHHHhCCcEEEEccccC-hhHHHHHHHHHHHHHhcccCCCCceeEe
Q 007536 125 E-LVEEVKATSVFAEEEVE-YHLRQMMAIVDETLAKVSLVDGKPKICL 170 (599)
Q Consensus 125 ~-l~~~~~~~~v~~~~~~~-~~~~~~d~~v~~~l~~~gi~~~~~~~~~ 170 (599)
+ ++..++|+.-|.-.|+- +--+..-+.+++.|...|| .++..
T Consensus 100 ~~IAp~L~It~RfVG~EP~~~vT~~YN~~M~~~Lp~~gi----~v~ei 143 (182)
T PF08218_consen 100 KYIAPALGITKRFVGEEPFSPVTRIYNEAMKEILPPYGI----EVVEI 143 (182)
T ss_pred HHhhHhcCcccceeCCCCCCHHHHHHHHHHHHhccccCC----EEEEE
Confidence 4 66778999777776665 4444555677788887775 55554
No 347
>PRK15118 universal stress global response regulator UspA; Provisional
Probab=20.86 E-value=5.6e+02 Score=22.25 Aligned_cols=41 Identities=12% Similarity=0.206 Sum_probs=30.2
Q ss_pred HHHHHHHhcCCcE---EEEEcCHHHHHHHHHHHhCCcEEEEccc
Q 007536 100 DLRKSLKEQGSDL---MIRFGRVENVIRELVEEVKATSVFAEEE 140 (599)
Q Consensus 100 ~L~~~L~~~g~~L---~v~~g~~~~~l~~l~~~~~~~~v~~~~~ 140 (599)
.|++.+++.|+.. ++..|+|.+.+.+.+++.+++.|+....
T Consensus 69 ~l~~~~~~~~~~~~~~~~~~G~p~~~I~~~a~~~~~DLIV~Gs~ 112 (144)
T PRK15118 69 ALTELSTNAGYPITETLSGSGDLGQVLVDAIKKYDMDLVVCGHH 112 (144)
T ss_pred HHHHHHHhCCCCceEEEEEecCHHHHHHHHHHHhCCCEEEEeCc
Confidence 3444345566653 4457999999999999999998888655
No 348
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=20.70 E-value=96 Score=29.75 Aligned_cols=44 Identities=9% Similarity=0.128 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHHHhcCCcEEEEEcCHHHHHHHHHHHhCCcEEEEc
Q 007536 94 VIFALEDLRKSLKEQGSDLMIRFGRVENVIRELVEEVKATSVFAE 138 (599)
Q Consensus 94 l~~sL~~L~~~L~~~g~~L~v~~g~~~~~l~~l~~~~~~~~v~~~ 138 (599)
+..+..++-+.|++. +++.|..|.....+..++++++++.+++|
T Consensus 69 l~pga~ell~~lk~~-~~~~IVS~~~~~~~~~il~~lgi~~~~an 112 (203)
T TIGR02137 69 PLEGAVEFVDWLRER-FQVVILSDTFYEFSQPLMRQLGFPTLLCH 112 (203)
T ss_pred CCccHHHHHHHHHhC-CeEEEEeCChHHHHHHHHHHcCCchhhce
Confidence 345667777888876 48999999988888889999999887775
No 349
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=20.46 E-value=1.5e+02 Score=27.43 Aligned_cols=28 Identities=21% Similarity=0.037 Sum_probs=22.3
Q ss_pred HHHhCCCCEEEEEeChHHHHHHHHHHhC
Q 007536 488 TVEVVGEPVHLIGNSIGGYFVAIVACLW 515 (599)
Q Consensus 488 l~~l~~~~~~lvGhS~Gg~ia~~~a~~~ 515 (599)
+.+.+...-.++|-|.|+.+|..++...
T Consensus 22 L~~~~~~~d~i~GtSaGal~a~~~a~g~ 49 (175)
T cd07205 22 LEEAGIPIDIVSGTSAGAIVGALYAAGY 49 (175)
T ss_pred HHHcCCCeeEEEEECHHHHHHHHHHcCC
Confidence 4455666778999999999999998754
No 350
>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice. The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.
Probab=20.40 E-value=97 Score=30.78 Aligned_cols=38 Identities=21% Similarity=0.303 Sum_probs=27.8
Q ss_pred HHHHHHHHHHHHHhcCCcEEEEEcCHHHHHHHHHHHhC
Q 007536 94 VIFALEDLRKSLKEQGSDLMIRFGRVENVIRELVEEVK 131 (599)
Q Consensus 94 l~~sL~~L~~~L~~~g~~L~v~~g~~~~~l~~l~~~~~ 131 (599)
|.++..+|=+.|.+.++|++|+.+.--+++.++.++.+
T Consensus 91 LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q~~ 128 (246)
T PF05822_consen 91 LRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQAG 128 (246)
T ss_dssp B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHHTT
T ss_pred hhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHHcC
Confidence 44677788888999999999998877778888777653
No 351
>COG1139 Uncharacterized conserved protein containing a ferredoxin-like domain [Energy production and conversion]
Probab=20.27 E-value=3.2e+02 Score=29.45 Aligned_cols=62 Identities=16% Similarity=0.242 Sum_probs=48.1
Q ss_pred HHHHHHHHHHHhcCCcEEEEEc--CHHHHHHHHHHHhCCcEEEEccccChhHHHHHHHHHHHHHhccc
Q 007536 96 FALEDLRKSLKEQGSDLMIRFG--RVENVIRELVEEVKATSVFAEEEVEYHLRQMMAIVDETLAKVSL 161 (599)
Q Consensus 96 ~sL~~L~~~L~~~g~~L~v~~g--~~~~~l~~l~~~~~~~~v~~~~~~~~~~~~~d~~v~~~l~~~gi 161 (599)
+=|..+.+++.++|+..++-.. +..+.+.+++.+.+.+.|+-.+....+|... .+.|++.|+
T Consensus 65 ~~l~~~~~~v~~~Gg~vy~A~~aedA~~ii~~iv~~k~~k~vVKsKSmvseEIgl----n~~Le~~G~ 128 (459)
T COG1139 65 EYLEQLEENVTRNGGHVYFAKDAEDAREIIGEIVGEKNGKKVVKSKSMVSEEIGL----NHYLEEKGI 128 (459)
T ss_pred HHHHHHHHHHHHcCCEEEEeCCHHHHHHHHHHHHhhccCcEEEEecchhHHHhhh----HHHHHHcCC
Confidence 4455677888899999998763 4557888899999999999999987777665 556666665
No 352
>cd06279 PBP1_LacI_like_3 Ligand-binding domain of uncharacterized DNA-binding regulatory proteins that are members of the LacI-GalR family of bacterial transcription repressors. This group includes the ligand-binding domain of uncharacterized DNA-binding regulatory proteins that are members of the LacI-GalR family of bacterial transcription repressors. The LacI-GalR family repressors are composed of two functional domains: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal ligand-binding domain, which is homologous to the sugar-binding domain of ABC-type transport systems that contain the type I periplasmic binding protein-like fold. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcription repressor undergoes a conformational change upon ligand binding which in turn changes the DNA binding affinity of the repressor.
Probab=20.17 E-value=5.4e+02 Score=25.34 Aligned_cols=71 Identities=15% Similarity=0.119 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHHHHHhcCCcEEEEEcCHHHHHHHHHHHhCCcEEEEccccChhHHHHHHHHHHHHHhcccCCCCceeEee
Q 007536 92 ELVIFALEDLRKSLKEQGSDLMIRFGRVENVIRELVEEVKATSVFAEEEVEYHLRQMMAIVDETLAKVSLVDGKPKICLW 171 (599)
Q Consensus 92 ~Fl~~sL~~L~~~L~~~g~~L~v~~g~~~~~l~~l~~~~~~~~v~~~~~~~~~~~~~d~~v~~~l~~~gi~~~~~~~~~~ 171 (599)
.|+.+-+..+++.+++.|..+.+...+......+.....+++.++..-.... +. ..+.+.+.|+ +++.++
T Consensus 17 ~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~dgiii~~~~~~-----~~-~~~~~~~~~i----pvV~~~ 86 (283)
T cd06279 17 PVASQFLAGVAEVLDAAGVNLLLLPASSEDSDSALVVSALVDGFIVYGVPRD-----DP-LVAALLRRGL----PVVVVD 86 (283)
T ss_pred ccHHHHHHHHHHHHHHCCCEEEEecCccHHHHHHHHHhcCCCEEEEeCCCCC-----hH-HHHHHHHcCC----CEEEEe
Confidence 3666777778899999999998887654333334455678888877543211 11 2333455554 777775
Q ss_pred C
Q 007536 172 Q 172 (599)
Q Consensus 172 ~ 172 (599)
.
T Consensus 87 ~ 87 (283)
T cd06279 87 Q 87 (283)
T ss_pred c
Confidence 3
No 353
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=20.03 E-value=90 Score=33.78 Aligned_cols=29 Identities=21% Similarity=0.161 Sum_probs=22.2
Q ss_pred hCCCCEEEEEeChHHHHHHHHHHhCCccc
Q 007536 491 VVGEPVHLIGNSIGGYFVAIVACLWPAVV 519 (599)
Q Consensus 491 l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v 519 (599)
.++.+-+++|-|.|+.+|..++...++.+
T Consensus 98 ~gl~p~vIsGTSaGAivAal~as~~~eel 126 (421)
T cd07230 98 ANLLPRIISGSSAGSIVAAILCTHTDEEI 126 (421)
T ss_pred cCCCCCEEEEECHHHHHHHHHHcCCHHHH
Confidence 34444479999999999999998666553
No 354
>PF11111 CENP-M: Centromere protein M (CENP-M); InterPro: IPR020987 The prime candidate for specifying centromere identity is the array of nucleosomes assembles associated with CENP-A []. CENP-A recruits a nucleosome associated complex (CENP-A-NAC complex) comprised of CENP-M which this entry represents, along with two other proteins []. Assembly of the CENP-A NAC at centromeres is partly dependent on CENP-M. The CENP-A NAC is essential, as disruption of the complex causes errors of chromosome alignment and segregation that preclude cell survival [].
Probab=20.03 E-value=5.2e+02 Score=24.28 Aligned_cols=79 Identities=18% Similarity=0.116 Sum_probs=49.3
Q ss_pred EEEEeCCcccccCCHhHHHHHHHHHHHHHHHHHhcCCcEEEEE-------cCHHHHHHHHHHHhCCcEEEEccccChhHH
Q 007536 74 PLYVFDHRILSRYSNEMLELVIFALEDLRKSLKEQGSDLMIRF-------GRVENVIRELVEEVKATSVFAEEEVEYHLR 146 (599)
Q Consensus 74 ~vfi~d~~~~~~~~~~r~~Fl~~sL~~L~~~L~~~g~~L~v~~-------g~~~~~l~~l~~~~~~~~v~~~~~~~~~~~ 146 (599)
.+|++|. .+.......-.||..++..+---.+=|+... +-..+.+.+|+.+|+..-++++.+.+..-.
T Consensus 68 IVFvinl-----~sk~SL~~ve~SL~~vd~~fflGKVCfl~t~a~~~~~~sv~~~~V~kla~~y~~plL~~~le~~~~~~ 142 (176)
T PF11111_consen 68 IVFVINL-----HSKYSLQSVEASLSHVDPSFFLGKVCFLATNAGRESHCSVHPNEVRKLAATYNSPLLFADLENEEGRT 142 (176)
T ss_pred EEEEEec-----CCcccHHHHHHHHhhCChhhhccceEEEEcCCCcccccccCHHHHHHHHHHhCCCEEEeecccchHHH
Confidence 6788875 2444455555666666555543222233322 334567889999999999999999876555
Q ss_pred HHHHHHHHHHH
Q 007536 147 QMMAIVDETLA 157 (599)
Q Consensus 147 ~~d~~v~~~l~ 157 (599)
..-+++.+.++
T Consensus 143 ~lAqRLL~~lq 153 (176)
T PF11111_consen 143 SLAQRLLRMLQ 153 (176)
T ss_pred HHHHHHHHHHH
Confidence 55555655554
Done!