Query 007541
Match_columns 599
No_of_seqs 373 out of 3275
Neff 7.5
Searched_HMMs 46136
Date Thu Mar 28 12:01:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007541.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/007541hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0660 Mitogen-activated prot 100.0 1.4E-80 3E-85 628.0 25.5 342 17-406 16-357 (359)
2 KOG0659 Cdk activating kinase 100.0 1.7E-63 3.6E-68 484.1 20.2 289 23-365 2-291 (318)
3 KOG0593 Predicted protein kina 100.0 3E-63 6.5E-68 489.3 16.5 289 23-362 2-291 (396)
4 KOG0661 MAPK related serine/th 100.0 1.5E-62 3.4E-67 509.2 14.2 290 20-362 7-298 (538)
5 KOG0600 Cdc2-related protein k 100.0 1.5E-61 3.3E-66 505.0 19.4 288 22-361 116-406 (560)
6 KOG0663 Protein kinase PITSLRE 100.0 1.5E-61 3.2E-66 482.8 17.0 295 20-364 73-370 (419)
7 cd07859 STKc_TDY_MAPK_plant Ca 100.0 4.2E-58 9.1E-63 482.2 32.9 338 24-403 1-338 (338)
8 KOG0658 Glycogen synthase kina 100.0 6.3E-59 1.4E-63 471.4 20.3 285 24-364 25-315 (364)
9 KOG0615 Serine/threonine prote 100.0 6.2E-58 1.3E-62 467.9 15.9 265 20-362 169-444 (475)
10 KOG0665 Jun-N-terminal kinase 100.0 1.7E-56 3.6E-61 445.1 16.6 339 17-408 11-362 (369)
11 KOG0594 Protein kinase PCTAIRE 100.0 2.1E-56 4.5E-61 453.5 17.3 294 22-363 10-310 (323)
12 KOG0667 Dual-specificity tyros 100.0 2E-54 4.3E-59 466.4 23.5 313 20-364 183-511 (586)
13 KOG0575 Polo-like serine/threo 100.0 7.7E-54 1.7E-58 457.3 24.5 264 22-368 17-282 (592)
14 KOG0666 Cyclin C-dependent kin 100.0 2.6E-53 5.7E-58 419.8 14.5 301 22-363 23-345 (438)
15 KOG0662 Cyclin-dependent kinas 100.0 6.2E-53 1.4E-57 388.9 13.7 286 23-362 2-290 (292)
16 cd07858 STKc_TEY_MAPK_plant Ca 100.0 8.5E-51 1.8E-55 428.5 30.6 336 20-403 2-337 (337)
17 KOG0581 Mitogen-activated prot 100.0 7.2E-52 1.5E-56 420.8 19.9 261 23-363 79-343 (364)
18 KOG0664 Nemo-like MAPK-related 100.0 4.7E-53 1E-57 411.3 9.4 287 28-361 58-349 (449)
19 KOG0588 Serine/threonine prote 100.0 2.2E-51 4.8E-56 439.6 19.4 263 21-367 10-275 (786)
20 cd07878 STKc_p38beta_MAPK11 Ca 100.0 4.9E-50 1.1E-54 423.3 29.4 331 19-402 11-342 (343)
21 cd07875 STKc_JNK1 Catalytic do 100.0 2.4E-49 5.1E-54 421.9 33.2 329 20-400 21-362 (364)
22 KOG0598 Ribosomal protein S6 k 100.0 8.7E-51 1.9E-55 412.8 20.6 260 19-361 21-287 (357)
23 KOG0592 3-phosphoinositide-dep 100.0 5E-51 1.1E-55 429.3 19.0 261 22-362 72-345 (604)
24 cd07853 STKc_NLK Catalytic dom 100.0 2.1E-49 4.6E-54 423.6 31.3 329 24-400 1-351 (372)
25 cd07849 STKc_ERK1_2_like Catal 100.0 4.7E-49 1E-53 414.9 31.2 334 20-399 2-335 (336)
26 cd07876 STKc_JNK2 Catalytic do 100.0 8.7E-49 1.9E-53 416.7 32.1 326 20-397 18-356 (359)
27 KOG0583 Serine/threonine prote 100.0 1.1E-49 2.4E-54 423.8 24.8 258 20-360 14-280 (370)
28 cd07871 STKc_PCTAIRE3 Catalyti 100.0 2.8E-49 6E-54 407.5 27.0 287 19-358 1-288 (288)
29 KOG0033 Ca2+/calmodulin-depend 100.0 3.7E-52 8E-57 400.1 4.7 261 20-361 8-273 (355)
30 KOG0595 Serine/threonine-prote 100.0 1.3E-49 2.7E-54 407.5 20.4 261 20-361 7-274 (429)
31 cd07874 STKc_JNK3 Catalytic do 100.0 3.5E-48 7.6E-53 411.3 31.1 327 20-398 14-353 (355)
32 cd07869 STKc_PFTAIRE1 Catalyti 100.0 5E-48 1.1E-52 400.8 27.7 291 19-362 1-295 (303)
33 KOG0597 Serine-threonine prote 100.0 1.2E-49 2.6E-54 418.6 15.5 258 23-363 2-259 (808)
34 cd07855 STKc_ERK5 Catalytic do 100.0 4.4E-48 9.5E-53 407.1 27.2 330 20-395 2-332 (334)
35 cd07834 STKc_MAPK Catalytic do 100.0 5.9E-48 1.3E-52 404.5 27.0 330 24-397 1-330 (330)
36 cd07851 STKc_p38 Catalytic dom 100.0 2.3E-47 5E-52 403.5 30.2 332 19-403 11-343 (343)
37 cd07862 STKc_CDK6 Catalytic do 100.0 8.1E-48 1.8E-52 395.5 25.4 284 23-358 1-290 (290)
38 KOG0591 NIMA (never in mitosis 100.0 8.1E-50 1.7E-54 390.8 9.5 262 18-363 14-284 (375)
39 PTZ00036 glycogen synthase kin 100.0 3.6E-47 7.8E-52 415.8 30.3 288 21-364 64-360 (440)
40 cd07848 STKc_CDKL5 Catalytic d 100.0 1.8E-47 3.9E-52 392.4 25.4 286 23-358 1-287 (287)
41 cd07850 STKc_JNK Catalytic dom 100.0 7.3E-47 1.6E-51 401.1 30.6 326 20-397 13-352 (353)
42 KOG0605 NDR and related serine 100.0 9.2E-48 2E-52 405.1 22.0 265 21-362 139-452 (550)
43 cd07863 STKc_CDK4 Catalytic do 100.0 3.5E-47 7.7E-52 390.1 25.5 283 24-358 1-288 (288)
44 cd07872 STKc_PCTAIRE2 Catalyti 100.0 7.8E-47 1.7E-51 392.9 27.9 291 19-362 2-293 (309)
45 KOG0616 cAMP-dependent protein 100.0 8.7E-48 1.9E-52 379.2 18.0 253 23-361 44-303 (355)
46 KOG0585 Ca2+/calmodulin-depend 100.0 6E-48 1.3E-52 400.1 17.0 268 19-361 93-378 (576)
47 cd07877 STKc_p38alpha_MAPK14 C 100.0 6.5E-46 1.4E-50 392.9 32.8 332 19-403 13-345 (345)
48 KOG0669 Cyclin T-dependent kin 100.0 1.3E-49 2.8E-54 383.8 4.0 303 19-360 13-320 (376)
49 cd07880 STKc_p38gamma_MAPK12 C 100.0 5.4E-46 1.2E-50 393.2 32.1 332 19-403 11-343 (343)
50 PTZ00284 protein kinase; Provi 100.0 1.2E-46 2.6E-51 414.8 28.1 295 22-363 128-446 (467)
51 PHA03212 serine/threonine kina 100.0 2E-46 4.3E-51 403.9 26.2 282 23-364 92-385 (391)
52 cd07868 STKc_CDK8 Catalytic do 100.0 3.8E-46 8.3E-51 388.6 25.8 286 28-358 6-317 (317)
53 cd07857 STKc_MPK1 Catalytic do 100.0 2E-45 4.3E-50 386.6 30.1 327 24-397 1-331 (332)
54 cd07879 STKc_p38delta_MAPK13 C 100.0 2.4E-45 5.3E-50 387.9 30.8 330 19-402 11-341 (342)
55 KOG0198 MEKK and related serin 100.0 1.4E-46 3.1E-51 386.9 19.8 265 21-362 15-283 (313)
56 cd05612 STKc_PRKX_like Catalyt 100.0 4.3E-46 9.3E-51 384.5 23.4 253 23-361 1-260 (291)
57 KOG0671 LAMMER dual specificit 100.0 1.4E-47 3.1E-52 389.2 10.1 295 22-362 88-413 (415)
58 KOG0032 Ca2+/calmodulin-depend 100.0 1.8E-45 3.9E-50 391.8 26.5 263 19-362 31-300 (382)
59 KOG0599 Phosphorylase kinase g 100.0 2.1E-47 4.4E-52 372.1 10.2 263 23-363 17-291 (411)
60 KOG0582 Ste20-like serine/thre 100.0 1.3E-45 2.9E-50 380.6 23.2 275 20-363 23-301 (516)
61 KOG0578 p21-activated serine/t 100.0 2.5E-46 5.3E-51 397.0 18.3 257 20-359 270-527 (550)
62 PTZ00263 protein kinase A cata 100.0 1.3E-45 2.9E-50 388.0 23.6 254 22-361 17-277 (329)
63 cd05571 STKc_PKB Catalytic dom 100.0 1.1E-45 2.3E-50 387.6 22.4 250 29-361 1-257 (323)
64 cd07873 STKc_PCTAIRE1 Catalyti 100.0 3.7E-45 8E-50 378.7 26.1 291 19-362 2-293 (301)
65 cd07852 STKc_MAPK15 Catalytic 100.0 3.6E-45 7.9E-50 385.2 26.3 331 20-398 4-337 (337)
66 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 1.4E-44 3.1E-49 380.1 30.3 323 18-396 5-327 (328)
67 cd07861 STKc_CDK1_euk Catalyti 100.0 1.4E-44 3.1E-49 369.9 27.1 282 24-358 1-285 (285)
68 cd05628 STKc_NDR1 Catalytic do 100.0 7E-45 1.5E-49 387.6 25.7 262 23-361 1-299 (363)
69 cd05599 STKc_NDR_like Catalyti 100.0 3.8E-45 8.3E-50 389.1 23.6 262 23-361 1-302 (364)
70 KOG0604 MAP kinase-activated p 100.0 3.4E-46 7.3E-51 368.0 13.9 271 10-364 49-331 (400)
71 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 6.1E-45 1.3E-49 383.1 24.4 261 23-361 1-263 (333)
72 cd05625 STKc_LATS1 Catalytic d 100.0 5E-45 1.1E-49 391.2 24.2 262 23-361 1-311 (382)
73 KOG0611 Predicted serine/threo 100.0 3.4E-46 7.5E-51 379.3 14.2 256 20-359 50-307 (668)
74 cd05626 STKc_LATS2 Catalytic d 100.0 8.2E-45 1.8E-49 389.7 25.3 263 23-361 1-311 (381)
75 cd07839 STKc_CDK5 Catalytic do 100.0 8.3E-45 1.8E-49 371.8 24.0 282 24-358 1-284 (284)
76 cd05631 STKc_GRK4 Catalytic do 100.0 1.2E-44 2.5E-49 372.5 24.3 259 24-362 1-268 (285)
77 cd05629 STKc_NDR_like_fungal C 100.0 6.2E-45 1.3E-49 389.9 23.1 262 23-361 1-311 (377)
78 cd05573 STKc_ROCK_NDR_like Cat 100.0 7.3E-45 1.6E-49 384.2 22.5 262 23-361 1-291 (350)
79 KOG4717 Serine/threonine prote 100.0 1.2E-44 2.6E-49 376.7 23.4 260 20-363 15-278 (864)
80 PTZ00426 cAMP-dependent protei 100.0 9.4E-45 2E-49 383.8 22.8 255 21-361 28-290 (340)
81 cd07845 STKc_CDK10 Catalytic d 100.0 3.9E-44 8.5E-49 372.4 26.4 296 21-366 5-301 (309)
82 cd05598 STKc_LATS Catalytic do 100.0 9.3E-45 2E-49 388.2 22.0 262 23-361 1-307 (376)
83 cd05585 STKc_YPK1_like Catalyt 100.0 1.4E-44 3E-49 377.1 22.2 248 31-361 1-253 (312)
84 cd07867 STKc_CDC2L6 Catalytic 100.0 4E-44 8.8E-49 372.8 24.9 288 28-358 6-317 (317)
85 cd05593 STKc_PKB_gamma Catalyt 100.0 2.7E-44 5.9E-49 378.1 23.3 250 29-361 1-257 (328)
86 cd05595 STKc_PKB_beta Catalyti 100.0 3.8E-44 8.2E-49 376.0 23.5 250 29-361 1-257 (323)
87 cd07832 STKc_CCRK Catalytic do 100.0 1.4E-43 3E-48 362.4 26.2 285 24-359 1-286 (286)
88 KOG1290 Serine/threonine prote 100.0 4.4E-44 9.6E-49 372.2 22.6 300 22-364 77-559 (590)
89 cd07860 STKc_CDK2_3 Catalytic 100.0 2.2E-43 4.9E-48 361.1 26.9 282 24-358 1-284 (284)
90 cd05587 STKc_cPKC Catalytic do 100.0 8.5E-44 1.8E-48 373.2 24.2 255 24-361 1-263 (324)
91 cd05601 STKc_CRIK Catalytic do 100.0 3.8E-44 8.2E-49 376.4 21.2 262 23-361 1-269 (330)
92 cd05589 STKc_PKN Catalytic dom 100.0 9.1E-44 2E-48 373.0 24.0 253 25-361 1-263 (324)
93 cd05614 STKc_MSK2_N N-terminal 100.0 7.2E-44 1.6E-48 374.6 23.3 261 24-361 1-273 (332)
94 cd05590 STKc_nPKC_eta Catalyti 100.0 5.9E-44 1.3E-48 374.1 22.5 250 29-361 1-259 (320)
95 cd07841 STKc_CDK7 Catalytic do 100.0 2.8E-43 6.1E-48 363.2 27.0 288 24-365 1-292 (298)
96 cd05594 STKc_PKB_alpha Catalyt 100.0 4E-44 8.8E-49 375.8 20.8 250 29-361 1-258 (325)
97 cd05627 STKc_NDR2 Catalytic do 100.0 6E-44 1.3E-48 379.9 22.0 262 23-361 1-299 (360)
98 cd05596 STKc_ROCK Catalytic do 100.0 1.1E-43 2.4E-48 379.8 24.1 264 21-361 41-310 (370)
99 cd06649 PKc_MEK2 Catalytic dom 100.0 4.8E-43 1E-47 368.8 28.4 302 22-361 4-307 (331)
100 cd07844 STKc_PCTAIRE_like Cata 100.0 3.2E-43 6.9E-48 361.6 25.8 287 19-358 1-291 (291)
101 KOG0694 Serine/threonine prote 100.0 5E-44 1.1E-48 386.1 20.0 256 22-362 367-631 (694)
102 cd05621 STKc_ROCK2 Catalytic d 100.0 1.6E-43 3.4E-48 378.7 23.6 264 21-361 41-310 (370)
103 cd07837 STKc_CdkB_plant Cataly 100.0 5E-43 1.1E-47 360.5 26.4 288 23-359 1-295 (295)
104 cd05591 STKc_nPKC_epsilon Cata 100.0 1.3E-43 2.7E-48 371.4 22.2 250 29-361 1-260 (321)
105 cd07854 STKc_MAPK4_6 Catalytic 100.0 6.4E-43 1.4E-47 369.4 27.7 303 20-369 2-314 (342)
106 cd05616 STKc_cPKC_beta Catalyt 100.0 2.5E-43 5.3E-48 369.5 24.1 255 24-361 1-263 (323)
107 cd07847 STKc_CDKL1_4 Catalytic 100.0 4.8E-43 1E-47 358.4 25.2 282 23-358 1-286 (286)
108 cd07865 STKc_CDK9 Catalytic do 100.0 7.5E-43 1.6E-47 361.1 26.8 297 20-358 9-310 (310)
109 cd05584 STKc_p70S6K Catalytic 100.0 2.3E-43 5E-48 369.9 23.1 251 28-361 1-262 (323)
110 PHA03207 serine/threonine kina 100.0 3.2E-43 6.9E-48 379.0 24.5 282 22-361 91-381 (392)
111 cd05597 STKc_DMPK_like Catalyt 100.0 5.6E-43 1.2E-47 368.4 25.8 264 23-361 1-272 (331)
112 cd05620 STKc_nPKC_delta Cataly 100.0 2.4E-43 5.3E-48 368.8 22.8 250 29-361 1-254 (316)
113 cd07866 STKc_BUR1 Catalytic do 100.0 6.9E-43 1.5E-47 361.5 25.7 295 20-358 5-311 (311)
114 PF00069 Pkinase: Protein kina 100.0 1.8E-43 3.9E-48 355.8 20.6 258 25-358 1-260 (260)
115 cd05575 STKc_SGK Catalytic dom 100.0 2.3E-43 5.1E-48 369.7 22.3 250 29-361 1-257 (323)
116 KOG0580 Serine/threonine prote 100.0 2.5E-44 5.5E-49 345.7 13.5 259 18-361 17-279 (281)
117 cd05592 STKc_nPKC_theta_delta 100.0 3.9E-43 8.4E-48 367.2 23.0 250 29-361 1-254 (316)
118 PLN00009 cyclin-dependent kina 100.0 9E-43 1.9E-47 359.1 25.1 287 23-362 2-291 (294)
119 cd07835 STKc_CDK1_like Catalyt 100.0 1.5E-42 3.2E-47 354.9 26.3 281 25-358 1-283 (283)
120 PHA03209 serine/threonine kina 100.0 7.4E-43 1.6E-47 371.5 25.0 279 22-361 65-357 (357)
121 cd05588 STKc_aPKC Catalytic do 100.0 4.8E-43 1E-47 368.6 23.2 259 29-361 1-268 (329)
122 KOG0610 Putative serine/threon 100.0 1.5E-43 3.4E-48 362.8 18.8 263 22-362 76-399 (459)
123 cd05582 STKc_RSK_N N-terminal 100.0 1.3E-43 2.8E-48 370.6 18.8 251 28-361 1-260 (318)
124 cd05570 STKc_PKC Catalytic dom 100.0 5.7E-43 1.2E-47 366.2 22.7 250 29-361 1-258 (318)
125 cd05615 STKc_cPKC_alpha Cataly 100.0 1.1E-42 2.4E-47 364.9 24.9 255 24-361 1-263 (323)
126 cd07843 STKc_CDC2L1 Catalytic 100.0 7.5E-43 1.6E-47 359.5 23.1 287 22-358 4-293 (293)
127 cd07846 STKc_CDKL2_3 Catalytic 100.0 1.3E-42 2.8E-47 355.6 24.5 285 23-358 1-286 (286)
128 cd07836 STKc_Pho85 Catalytic d 100.0 1.2E-42 2.6E-47 355.4 24.0 281 24-358 1-284 (284)
129 cd07842 STKc_CDK8_like Catalyt 100.0 2.2E-42 4.8E-47 358.9 26.2 295 24-358 1-316 (316)
130 cd05623 STKc_MRCK_alpha Cataly 100.0 1.3E-42 2.7E-47 365.7 24.4 264 23-361 1-272 (332)
131 cd05622 STKc_ROCK1 Catalytic d 100.0 1.1E-42 2.4E-47 372.2 24.4 264 21-361 41-310 (371)
132 cd05618 STKc_aPKC_iota Catalyt 100.0 8.6E-43 1.9E-47 366.8 22.8 259 29-361 1-268 (329)
133 cd07831 STKc_MOK Catalytic dom 100.0 2E-42 4.4E-47 353.1 24.8 280 25-358 1-282 (282)
134 KOG0670 U4/U6-associated splic 100.0 3.8E-44 8.3E-49 373.9 12.0 310 22-360 431-751 (752)
135 PTZ00283 serine/threonine prot 100.0 1.6E-42 3.6E-47 384.2 25.8 267 20-361 29-303 (496)
136 cd05605 STKc_GRK4_like Catalyt 100.0 1.9E-42 4.2E-47 356.0 24.5 258 24-361 1-267 (285)
137 cd05619 STKc_nPKC_theta Cataly 100.0 1.2E-42 2.6E-47 363.7 23.3 251 29-362 1-255 (316)
138 cd05608 STKc_GRK1 Catalytic do 100.0 1.1E-42 2.3E-47 357.1 22.3 252 31-361 1-263 (280)
139 PHA03211 serine/threonine kina 100.0 1.4E-42 3E-47 380.4 24.7 282 21-360 167-460 (461)
140 PTZ00024 cyclin-dependent prot 100.0 1.7E-42 3.6E-47 364.5 24.2 295 19-364 4-322 (335)
141 cd07870 STKc_PFTAIRE2 Catalyti 100.0 9E-42 1.9E-46 351.1 29.0 287 19-358 1-291 (291)
142 cd05604 STKc_SGK3 Catalytic do 100.0 9.1E-43 2E-47 365.5 21.2 250 29-361 1-257 (325)
143 PLN00034 mitogen-activated pro 100.0 1.3E-42 2.9E-47 368.6 22.6 258 22-361 73-334 (353)
144 cd07833 STKc_CDKL Catalytic do 100.0 2E-42 4.3E-47 354.2 23.0 286 23-358 1-288 (288)
145 cd06650 PKc_MEK1 Catalytic dom 100.0 4.4E-42 9.5E-47 362.0 25.0 299 22-361 4-305 (333)
146 cd06625 STKc_MEKK3_like Cataly 100.0 6.4E-42 1.4E-46 345.8 25.1 258 23-358 2-263 (263)
147 cd05118 STKc_CMGC Catalytic do 100.0 4.5E-42 9.9E-47 350.3 24.2 282 25-358 1-283 (283)
148 KOG0668 Casein kinase II, alph 100.0 9.6E-44 2.1E-48 339.1 10.8 290 17-363 32-330 (338)
149 cd05586 STKc_Sck1_like Catalyt 100.0 6.6E-43 1.4E-47 367.2 18.3 250 31-361 1-259 (330)
150 cd05603 STKc_SGK2 Catalytic do 100.0 1.8E-42 3.9E-47 362.5 21.5 250 29-361 1-257 (321)
151 cd05602 STKc_SGK1 Catalytic do 100.0 2.3E-42 4.9E-47 362.6 22.2 250 29-361 1-257 (325)
152 cd05624 STKc_MRCK_beta Catalyt 100.0 3.9E-42 8.4E-47 362.0 24.0 264 23-361 1-272 (331)
153 KOG0589 Serine/threonine prote 100.0 4.1E-43 9E-48 370.3 15.6 260 21-361 2-264 (426)
154 KOG0201 Serine/threonine prote 100.0 5.6E-44 1.2E-48 368.5 8.7 258 20-360 10-268 (467)
155 cd05617 STKc_aPKC_zeta Catalyt 100.0 5.9E-42 1.3E-46 360.0 22.9 258 29-362 1-267 (327)
156 KOG0607 MAP kinase-interacting 100.0 1.1E-42 2.5E-47 345.3 16.1 279 25-364 79-370 (463)
157 cd05630 STKc_GRK6 Catalytic do 100.0 1.4E-41 2.9E-46 349.9 23.9 258 24-361 1-267 (285)
158 cd07829 STKc_CDK_like Catalyti 100.0 1.3E-41 2.8E-46 346.7 23.4 281 25-358 1-282 (282)
159 cd08223 STKc_Nek4 Catalytic do 100.0 4.6E-41 1E-45 338.4 26.8 254 24-358 1-257 (257)
160 cd07864 STKc_CDK12 Catalytic d 100.0 2E-41 4.3E-46 349.8 23.8 291 22-358 6-302 (302)
161 cd07840 STKc_CDK9_like Catalyt 100.0 2.2E-41 4.8E-46 345.5 23.6 285 25-358 1-287 (287)
162 PTZ00267 NIMA-related protein 100.0 2.8E-41 6.1E-46 373.1 26.2 258 22-361 66-329 (478)
163 PTZ00266 NIMA-related protein 100.0 2.8E-41 6.2E-46 389.0 27.0 263 20-361 10-301 (1021)
164 cd07838 STKc_CDK4_6_like Catal 100.0 4.9E-41 1.1E-45 343.4 25.2 282 25-358 1-287 (287)
165 cd08227 PK_STRAD_alpha Pseudok 100.0 2.6E-41 5.7E-46 354.6 23.0 298 27-362 2-314 (327)
166 cd07830 STKc_MAK_like Catalyti 100.0 5.1E-41 1.1E-45 343.2 24.4 280 25-358 1-283 (283)
167 cd05632 STKc_GRK5 Catalytic do 100.0 7.5E-41 1.6E-45 344.2 25.6 258 24-361 1-267 (285)
168 KOG0192 Tyrosine kinase specif 100.0 3.7E-41 8.1E-46 356.0 23.3 253 22-354 40-298 (362)
169 cd06615 PKc_MEK Catalytic doma 100.0 1.5E-40 3.2E-45 346.0 27.2 293 23-363 1-295 (308)
170 cd05607 STKc_GRK7 Catalytic do 100.0 3.3E-41 7.2E-46 345.4 21.6 253 31-362 1-261 (277)
171 cd05580 STKc_PKA Catalytic dom 100.0 1.1E-40 2.3E-45 343.5 25.5 254 23-362 1-261 (290)
172 cd06651 STKc_MEKK3 Catalytic d 100.0 1.1E-40 2.4E-45 338.6 24.7 260 23-359 2-265 (266)
173 cd05102 PTKc_VEGFR3 Catalytic 100.0 4.9E-41 1.1E-45 353.8 22.7 254 22-354 6-329 (338)
174 cd08529 STKc_FA2-like Catalyti 100.0 2.3E-40 4.9E-45 332.8 25.9 253 24-358 1-256 (256)
175 cd05574 STKc_phototropin_like 100.0 1.9E-40 4.1E-45 345.6 26.2 262 23-362 1-296 (316)
176 PHA03210 serine/threonine kina 100.0 3.6E-41 7.8E-46 374.2 22.0 287 22-361 147-460 (501)
177 KOG0586 Serine/threonine prote 100.0 9.9E-41 2.1E-45 357.2 24.2 262 20-364 53-315 (596)
178 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 1.2E-40 2.7E-45 341.5 23.8 261 23-363 1-270 (286)
179 cd06637 STKc_TNIK Catalytic do 100.0 8.9E-41 1.9E-45 339.5 22.3 261 21-358 4-272 (272)
180 cd06644 STKc_STK10_LOK Catalyt 100.0 2.8E-40 6E-45 340.5 26.2 264 19-362 8-276 (292)
181 KOG0690 Serine/threonine prote 100.0 3.7E-42 7.9E-47 342.0 11.4 256 23-361 168-430 (516)
182 cd06628 STKc_MAPKKK_Byr2_like 100.0 2.1E-40 4.6E-45 335.8 24.3 256 24-358 1-267 (267)
183 KOG0596 Dual specificity; seri 100.0 1.5E-41 3.3E-46 357.6 15.6 263 22-361 360-633 (677)
184 cd06631 STKc_YSK4 Catalytic do 100.0 3.6E-40 7.9E-45 334.0 24.9 257 24-358 1-265 (265)
185 cd06639 STKc_myosinIIIB Cataly 100.0 6.5E-40 1.4E-44 337.3 27.1 263 21-359 20-291 (291)
186 cd06654 STKc_PAK1 Catalytic do 100.0 4.2E-40 9.1E-45 340.7 25.8 260 19-361 16-276 (296)
187 cd06655 STKc_PAK2 Catalytic do 100.0 6.2E-40 1.3E-44 339.6 26.9 259 21-362 17-276 (296)
188 cd06645 STKc_MAP4K3 Catalytic 100.0 1E-40 2.2E-45 338.4 20.6 260 20-357 6-267 (267)
189 cd06630 STKc_MEKK1 Catalytic d 100.0 1.8E-40 3.8E-45 336.2 22.3 261 24-359 1-268 (268)
190 cd08217 STKc_Nek2 Catalytic do 100.0 5.9E-40 1.3E-44 330.3 25.7 255 24-358 1-265 (265)
191 cd08221 STKc_Nek9 Catalytic do 100.0 7.1E-40 1.5E-44 329.8 25.9 253 24-358 1-256 (256)
192 cd06656 STKc_PAK3 Catalytic do 100.0 3.1E-40 6.7E-45 341.8 23.9 261 19-362 15-276 (297)
193 KOG0577 Serine/threonine prote 100.0 2.3E-41 4.9E-46 357.0 15.5 263 15-360 18-283 (948)
194 cd06609 STKc_MST3_like Catalyt 100.0 2.2E-40 4.8E-45 337.5 22.3 256 23-361 1-257 (274)
195 cd06619 PKc_MKK5 Catalytic dom 100.0 3.5E-40 7.7E-45 337.7 23.9 258 23-361 1-259 (279)
196 cd06608 STKc_myosinIII_like Ca 100.0 5.2E-40 1.1E-44 332.9 24.8 262 21-358 4-275 (275)
197 cd05609 STKc_MAST Catalytic do 100.0 7.8E-40 1.7E-44 339.7 26.5 262 23-361 1-279 (305)
198 cd06613 STKc_MAP4K3_like Catal 100.0 5.6E-40 1.2E-44 331.1 24.7 258 22-357 2-262 (262)
199 cd06646 STKc_MAP4K5 Catalytic 100.0 1.6E-40 3.4E-45 337.0 20.7 260 20-357 6-267 (267)
200 cd06652 STKc_MEKK2 Catalytic d 100.0 9E-40 2E-44 331.4 26.0 260 23-359 2-265 (265)
201 cd08220 STKc_Nek8 Catalytic do 100.0 8.9E-40 1.9E-44 328.5 25.8 252 24-358 1-256 (256)
202 cd06617 PKc_MKK3_6 Catalytic d 100.0 5.5E-40 1.2E-44 335.6 24.5 258 23-361 1-267 (283)
203 cd08218 STKc_Nek1 Catalytic do 100.0 6.6E-40 1.4E-44 330.1 24.5 253 24-358 1-256 (256)
204 cd06610 STKc_OSR1_SPAK Catalyt 100.0 8.4E-40 1.8E-44 330.4 25.2 262 23-358 1-267 (267)
205 cd06611 STKc_SLK_like Catalyti 100.0 2.4E-40 5.3E-45 338.3 21.5 260 22-361 4-268 (280)
206 KOG0574 STE20-like serine/thre 100.0 4.5E-43 9.8E-48 345.3 1.2 255 23-361 33-289 (502)
207 cd06636 STKc_MAP4K4_6 Catalyti 100.0 4.3E-40 9.4E-45 336.8 23.3 263 19-358 12-282 (282)
208 cd05578 STKc_Yank1 Catalytic d 100.0 3.3E-40 7.1E-45 333.0 22.1 254 24-358 1-258 (258)
209 cd06638 STKc_myosinIIIA Cataly 100.0 1.3E-39 2.7E-44 333.8 25.5 267 16-358 10-286 (286)
210 cd06605 PKc_MAPKK Catalytic do 100.0 4.1E-40 8.9E-45 333.0 21.3 258 23-361 1-263 (265)
211 cd06626 STKc_MEKK4 Catalytic d 100.0 1.2E-39 2.7E-44 328.9 24.8 261 24-358 1-264 (264)
212 cd06643 STKc_SLK Catalytic dom 100.0 1E-39 2.2E-44 334.4 24.3 258 24-361 6-268 (282)
213 cd06629 STKc_MAPKKK_Bck1_like 100.0 1.9E-39 4.1E-44 330.0 25.6 262 24-358 2-272 (272)
214 cd06632 STKc_MEKK1_plant Catal 100.0 1.4E-39 3E-44 327.1 24.0 254 24-358 1-258 (258)
215 KOG4236 Serine/threonine prote 100.0 2.2E-41 4.7E-46 353.2 10.9 261 19-361 558-825 (888)
216 cd06658 STKc_PAK5 Catalytic do 100.0 5.7E-40 1.2E-44 339.2 21.1 262 20-364 19-281 (292)
217 cd06612 STKc_MST1_2 Catalytic 100.0 1.2E-39 2.6E-44 327.5 22.4 253 22-358 2-256 (256)
218 cd06623 PKc_MAPKK_plant_like C 100.0 3E-39 6.4E-44 325.8 25.2 259 23-361 1-262 (264)
219 cd06616 PKc_MKK4 Catalytic dom 100.0 1.1E-39 2.3E-44 334.9 21.8 262 23-361 4-273 (288)
220 cd05572 STKc_cGK_PKG Catalytic 100.0 1.8E-39 4E-44 328.3 22.9 249 31-361 1-258 (262)
221 cd08225 STKc_Nek5 Catalytic do 100.0 4.9E-39 1.1E-43 323.3 24.5 253 24-358 1-257 (257)
222 PHA02988 hypothetical protein; 100.0 3.2E-39 6.9E-44 332.5 23.6 246 29-354 26-274 (283)
223 cd06653 STKc_MEKK3_like_1 Cata 100.0 1E-38 2.2E-43 323.8 27.0 259 23-358 2-264 (264)
224 cd05581 STKc_PDK1 Catalytic do 100.0 3.2E-39 7E-44 328.4 23.4 256 23-358 1-280 (280)
225 cd05633 STKc_GRK3 Catalytic do 100.0 2.5E-39 5.4E-44 332.1 22.7 252 30-362 1-262 (279)
226 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 8.2E-39 1.8E-43 328.9 26.1 266 23-362 1-273 (287)
227 cd06648 STKc_PAK_II Catalytic 100.0 7.8E-39 1.7E-43 329.2 25.8 259 23-364 19-278 (285)
228 cd05096 PTKc_DDR1 Catalytic do 100.0 6.8E-39 1.5E-43 332.3 25.1 259 22-354 4-300 (304)
229 cd06659 STKc_PAK6 Catalytic do 100.0 2.6E-39 5.7E-44 335.1 21.9 261 20-363 18-279 (297)
230 cd05064 PTKc_EphR_A10 Catalyti 100.0 6.3E-39 1.4E-43 326.2 24.2 251 22-354 4-260 (266)
231 KOG0612 Rho-associated, coiled 100.0 8.9E-41 1.9E-45 374.8 11.3 264 22-362 74-345 (1317)
232 cd08215 STKc_Nek Catalytic dom 100.0 1.1E-38 2.3E-43 319.5 25.2 253 24-358 1-258 (258)
233 cd05577 STKc_GRK Catalytic dom 100.0 3.6E-39 7.8E-44 329.7 22.2 252 31-362 1-261 (277)
234 KOG4279 Serine/threonine prote 100.0 3.7E-40 8.1E-45 352.5 15.3 266 13-361 568-838 (1226)
235 cd06607 STKc_TAO Catalytic dom 100.0 6.2E-39 1.3E-43 333.3 23.9 262 16-360 8-272 (307)
236 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 3.2E-39 6.9E-44 331.3 21.3 267 22-361 4-272 (284)
237 cd08219 STKc_Nek3 Catalytic do 100.0 8E-39 1.7E-43 322.3 23.8 249 24-355 1-252 (255)
238 cd06647 STKc_PAK_I Catalytic d 100.0 7.1E-39 1.5E-43 331.0 23.8 260 21-363 17-277 (293)
239 cd08226 PK_STRAD_beta Pseudoki 100.0 2.6E-39 5.7E-44 339.6 20.8 303 29-363 4-316 (328)
240 cd05052 PTKc_Abl Catalytic dom 100.0 1.4E-38 3E-43 322.6 25.2 249 22-354 5-257 (263)
241 cd05048 PTKc_Ror Catalytic Dom 100.0 6.2E-39 1.4E-43 328.1 22.8 252 23-355 5-279 (283)
242 cd05610 STKc_MASTL Catalytic d 100.0 1E-38 2.3E-43 365.5 26.8 148 22-174 3-152 (669)
243 cd08216 PK_STRAD Pseudokinase 100.0 5.6E-39 1.2E-43 333.9 22.4 284 35-362 12-302 (314)
244 KOG0584 Serine/threonine prote 100.0 6.5E-40 1.4E-44 351.2 15.6 268 12-361 28-302 (632)
245 cd05606 STKc_beta_ARK Catalyti 100.0 9.4E-39 2E-43 327.4 23.6 251 30-361 1-261 (278)
246 cd06624 STKc_ASK Catalytic dom 100.0 1.8E-38 4E-43 322.3 25.5 251 28-358 13-268 (268)
247 cd06640 STKc_MST4 Catalytic do 100.0 5.5E-39 1.2E-43 328.3 21.6 257 22-362 3-260 (277)
248 cd05611 STKc_Rim15_like Cataly 100.0 8.8E-39 1.9E-43 323.0 22.5 250 29-361 2-257 (260)
249 cd06627 STKc_Cdc7_like Catalyt 100.0 2.5E-38 5.4E-43 316.8 25.6 253 24-358 1-254 (254)
250 cd06642 STKc_STK25-YSK1 Cataly 100.0 2.4E-39 5.1E-44 330.7 18.2 256 23-362 4-260 (277)
251 cd06606 STKc_MAPKKK Catalytic 100.0 1.8E-38 4E-43 317.4 24.0 259 24-358 1-260 (260)
252 cd05579 STKc_MAST_like Catalyt 100.0 1E-38 2.2E-43 321.4 22.2 253 31-361 1-263 (265)
253 cd05035 PTKc_Axl_like Catalyti 100.0 1.6E-38 3.4E-43 322.5 23.8 256 25-355 1-268 (273)
254 cd05613 STKc_MSK1_N N-terminal 100.0 1.7E-38 3.7E-43 326.6 24.3 263 24-362 1-275 (290)
255 cd08530 STKc_CNK2-like Catalyt 100.0 2.4E-38 5.2E-43 317.7 24.4 251 24-358 1-256 (256)
256 cd05106 PTKc_CSF-1R Catalytic 100.0 6.6E-39 1.4E-43 343.5 21.6 205 22-235 37-319 (374)
257 cd05062 PTKc_IGF-1R Catalytic 100.0 1.8E-38 3.9E-43 324.2 23.9 254 21-355 4-274 (277)
258 cd05061 PTKc_InsR Catalytic do 100.0 2.5E-38 5.4E-43 325.5 24.8 259 22-361 5-286 (288)
259 cd05049 PTKc_Trk Catalytic dom 100.0 1.3E-38 2.9E-43 324.9 22.5 252 22-354 4-276 (280)
260 KOG0579 Ste20-like serine/thre 100.0 2.3E-40 4.9E-45 351.0 9.6 267 16-362 25-296 (1187)
261 cd06633 STKc_TAO3 Catalytic do 100.0 1.8E-38 4E-43 331.2 23.7 265 14-361 12-279 (313)
262 cd06917 STKc_NAK1_like Catalyt 100.0 1.8E-38 4E-43 323.6 23.1 257 24-362 2-262 (277)
263 cd05075 PTKc_Axl Catalytic dom 100.0 2.4E-38 5.2E-43 321.6 23.7 256 25-355 1-267 (272)
264 cd05116 PTKc_Syk Catalytic dom 100.0 2.5E-38 5.5E-43 319.6 23.6 245 30-354 2-250 (257)
265 KOG1989 ARK protein kinase fam 100.0 5.3E-39 1.2E-43 356.7 20.3 257 22-355 36-307 (738)
266 PHA03390 pk1 serine/threonine- 100.0 1.3E-38 2.8E-43 324.7 21.5 247 23-360 14-267 (267)
267 cd05104 PTKc_Kit Catalytic dom 100.0 1.2E-38 2.6E-43 341.5 22.3 205 22-235 34-321 (375)
268 cd05054 PTKc_VEGFR Catalytic d 100.0 1.1E-38 2.3E-43 337.0 21.3 255 22-355 6-329 (337)
269 cd06641 STKc_MST3 Catalytic do 100.0 4.6E-38 1E-42 321.5 24.7 254 24-361 5-259 (277)
270 KOG2345 Serine/threonine prote 100.0 3.3E-39 7.2E-44 311.7 14.7 212 19-232 17-242 (302)
271 KOG1035 eIF-2alpha kinase GCN2 100.0 3.5E-39 7.6E-44 364.6 17.0 264 23-359 479-875 (1351)
272 cd05108 PTKc_EGFR Catalytic do 100.0 4.1E-38 8.9E-43 328.6 24.0 253 21-355 5-264 (316)
273 cd05122 PKc_STE Catalytic doma 100.0 9.3E-38 2E-42 311.0 25.4 251 24-357 1-253 (253)
274 cd05036 PTKc_ALK_LTK Catalytic 100.0 4.4E-38 9.6E-43 321.6 23.5 253 22-355 5-274 (277)
275 cd05072 PTKc_Lyn Catalytic dom 100.0 5.8E-38 1.3E-42 317.2 23.9 248 22-354 5-256 (261)
276 cd06635 STKc_TAO1 Catalytic do 100.0 5.6E-38 1.2E-42 328.0 24.5 258 20-360 22-282 (317)
277 cd06634 STKc_TAO2 Catalytic do 100.0 5.5E-38 1.2E-42 326.7 24.2 259 20-361 12-273 (308)
278 cd06614 STKc_PAK Catalytic dom 100.0 5.3E-38 1.1E-42 322.3 23.6 261 18-361 14-276 (286)
279 cd08228 STKc_Nek6 Catalytic do 100.0 5.8E-38 1.3E-42 317.9 23.5 202 23-234 2-209 (267)
280 cd05114 PTKc_Tec_Rlk Catalytic 100.0 7.9E-38 1.7E-42 315.5 24.4 247 23-354 4-253 (256)
281 cd00192 PTKc Catalytic domain 100.0 6.7E-38 1.5E-42 314.4 23.6 246 29-355 1-260 (262)
282 cd05084 PTKc_Fes Catalytic dom 100.0 6.1E-38 1.3E-42 315.4 23.3 245 29-354 1-248 (252)
283 cd05089 PTKc_Tie1 Catalytic do 100.0 6.3E-38 1.4E-42 324.2 23.9 249 23-355 2-271 (297)
284 cd05068 PTKc_Frk_like Catalyti 100.0 1.3E-37 2.7E-42 315.0 25.2 248 22-354 5-256 (261)
285 cd06657 STKc_PAK4 Catalytic do 100.0 4.7E-38 1E-42 325.1 22.5 257 23-362 20-277 (292)
286 KOG0986 G protein-coupled rece 100.0 2.1E-39 4.5E-44 334.6 12.0 261 22-362 184-453 (591)
287 cd05093 PTKc_TrkB Catalytic do 100.0 8.4E-38 1.8E-42 321.6 24.0 251 22-354 4-274 (288)
288 cd05071 PTKc_Src Catalytic dom 100.0 9.4E-38 2E-42 316.8 23.8 247 22-354 5-255 (262)
289 KOG0603 Ribosomal protein S6 k 100.0 7E-39 1.5E-43 344.6 15.7 243 22-358 321-566 (612)
290 cd05033 PTKc_EphR Catalytic do 100.0 1.5E-37 3.3E-42 315.3 24.7 253 22-355 3-261 (266)
291 cd05053 PTKc_FGFR Catalytic do 100.0 7.9E-38 1.7E-42 321.8 22.8 253 22-355 11-287 (293)
292 cd06618 PKc_MKK7 Catalytic dom 100.0 1.2E-37 2.6E-42 321.7 24.3 262 21-362 13-280 (296)
293 cd05088 PTKc_Tie2 Catalytic do 100.0 6.5E-38 1.4E-42 325.4 22.3 250 22-355 6-276 (303)
294 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 2.1E-37 4.4E-42 313.3 25.4 203 23-235 2-210 (267)
295 cd05090 PTKc_Ror1 Catalytic do 100.0 1.2E-37 2.5E-42 319.2 23.9 252 23-355 5-279 (283)
296 cd05060 PTKc_Syk_like Catalyti 100.0 1.4E-37 2.9E-42 314.0 23.8 245 29-354 1-250 (257)
297 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 9.5E-38 2.1E-42 315.7 22.4 247 22-354 5-255 (260)
298 cd05113 PTKc_Btk_Bmx Catalytic 100.0 1.6E-37 3.5E-42 314.0 23.9 249 22-355 3-254 (256)
299 cd05051 PTKc_DDR Catalytic dom 100.0 1.2E-37 2.5E-42 320.7 23.3 259 22-354 4-292 (296)
300 KOG0197 Tyrosine kinases [Sign 100.0 1.4E-38 3.1E-43 337.1 16.4 247 23-354 206-456 (468)
301 cd05059 PTKc_Tec_like Catalyti 100.0 1.1E-37 2.4E-42 314.8 22.2 248 23-355 4-254 (256)
302 cd05063 PTKc_EphR_A2 Catalytic 100.0 2.1E-37 4.6E-42 314.2 24.4 253 22-354 4-262 (268)
303 cd05066 PTKc_EphR_A Catalytic 100.0 1.9E-37 4.1E-42 315.0 24.0 253 22-354 3-261 (267)
304 cd05032 PTKc_InsR_like Catalyt 100.0 1.9E-37 4.2E-42 315.8 24.1 252 22-354 5-273 (277)
305 cd05109 PTKc_HER2 Catalytic do 100.0 2.7E-37 6E-42 315.8 25.2 253 20-354 4-263 (279)
306 cd05148 PTKc_Srm_Brk Catalytic 100.0 7.4E-38 1.6E-42 316.1 20.3 247 23-354 6-256 (261)
307 KOG0983 Mitogen-activated prot 100.0 1E-38 2.2E-43 311.5 13.4 257 26-362 95-356 (391)
308 cd08222 STKc_Nek11 Catalytic d 100.0 1.4E-37 3.1E-42 314.1 22.3 252 24-358 1-260 (260)
309 cd05034 PTKc_Src_like Catalyti 100.0 2.5E-37 5.3E-42 312.3 24.0 249 21-354 4-256 (261)
310 PRK13184 pknD serine/threonine 100.0 1.5E-37 3.2E-42 356.9 24.9 206 23-235 2-235 (932)
311 cd05091 PTKc_Ror2 Catalytic do 100.0 8.1E-38 1.8E-42 320.1 20.5 252 23-355 5-279 (283)
312 cd05123 STKc_AGC Catalytic dom 100.0 2E-37 4.4E-42 310.2 22.9 245 31-358 1-250 (250)
313 cd05105 PTKc_PDGFR_alpha Catal 100.0 1.7E-37 3.7E-42 335.3 23.5 205 22-235 36-344 (400)
314 cd05094 PTKc_TrkC Catalytic do 100.0 4.1E-37 8.8E-42 317.0 25.2 251 22-354 4-277 (291)
315 cd05067 PTKc_Lck_Blk Catalytic 100.0 3.3E-37 7.3E-42 311.7 24.0 247 22-354 5-255 (260)
316 cd08229 STKc_Nek7 Catalytic do 100.0 1.3E-37 2.9E-42 315.3 21.0 203 23-235 2-210 (267)
317 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 4.2E-37 9.1E-42 315.0 24.7 204 22-232 3-212 (284)
318 cd05583 STKc_MSK_N N-terminal 100.0 2.9E-37 6.4E-42 317.1 23.3 263 24-362 1-273 (288)
319 cd05082 PTKc_Csk Catalytic dom 100.0 3.9E-37 8.4E-42 310.5 23.7 243 22-354 5-251 (256)
320 cd05069 PTKc_Yes Catalytic dom 100.0 5.1E-37 1.1E-41 310.6 24.6 247 22-354 5-255 (260)
321 cd05098 PTKc_FGFR1 Catalytic d 100.0 3.1E-37 6.8E-42 320.5 23.6 253 22-355 17-295 (307)
322 cd05065 PTKc_EphR_B Catalytic 100.0 5.3E-37 1.1E-41 311.8 24.7 253 22-354 3-263 (269)
323 cd05039 PTKc_Csk_like Catalyti 100.0 5.4E-37 1.2E-41 309.2 24.2 243 22-354 5-251 (256)
324 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 3.6E-37 7.7E-42 315.7 22.9 204 23-233 3-212 (283)
325 PLN03225 Serine/threonine-prot 100.0 2.4E-37 5.1E-42 347.0 23.4 278 21-362 130-457 (566)
326 cd05040 PTKc_Ack_like Catalyti 100.0 5E-37 1.1E-41 309.3 22.9 246 29-354 1-253 (257)
327 cd05097 PTKc_DDR_like Catalyti 100.0 5.9E-37 1.3E-41 316.4 24.0 259 22-354 4-291 (295)
328 cd05101 PTKc_FGFR2 Catalytic d 100.0 6.7E-37 1.5E-41 317.3 24.5 254 21-355 13-292 (304)
329 cd05099 PTKc_FGFR4 Catalytic d 100.0 7.4E-37 1.6E-41 318.9 24.9 252 22-354 11-288 (314)
330 cd05055 PTKc_PDGFR Catalytic d 100.0 6.8E-37 1.5E-41 317.8 24.5 253 22-354 34-296 (302)
331 cd05092 PTKc_TrkA Catalytic do 100.0 6.1E-37 1.3E-41 313.9 23.0 251 22-354 4-276 (280)
332 cd05103 PTKc_VEGFR2 Catalytic 100.0 4.3E-37 9.2E-42 325.3 22.5 206 22-235 6-286 (343)
333 KOG4645 MAPKKK (MAP kinase kin 100.0 3.1E-39 6.7E-44 366.5 6.4 265 22-362 1234-1501(1509)
334 cd05111 PTK_HER3 Pseudokinase 100.0 1E-36 2.2E-41 312.3 24.3 205 22-236 6-217 (279)
335 cd05115 PTKc_Zap-70 Catalytic 100.0 9.9E-37 2.1E-41 308.7 23.7 244 30-354 2-250 (257)
336 cd05056 PTKc_FAK Catalytic dom 100.0 1.3E-36 2.8E-41 309.1 24.6 251 22-355 5-261 (270)
337 smart00219 TyrKc Tyrosine kina 100.0 1.2E-36 2.6E-41 305.4 24.1 248 25-354 1-256 (258)
338 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 4.5E-37 9.8E-42 315.3 21.4 271 22-355 3-279 (284)
339 cd05112 PTKc_Itk Catalytic dom 100.0 1.6E-36 3.4E-41 305.5 24.3 249 22-355 3-254 (256)
340 cd05045 PTKc_RET Catalytic dom 100.0 8.7E-37 1.9E-41 314.1 22.8 250 24-354 1-281 (290)
341 cd05100 PTKc_FGFR3 Catalytic d 100.0 1.2E-36 2.7E-41 320.1 24.3 252 23-355 12-289 (334)
342 cd05073 PTKc_Hck Catalytic dom 100.0 2.5E-36 5.4E-41 305.6 25.3 248 21-354 4-255 (260)
343 cd05043 PTK_Ryk Pseudokinase d 100.0 1.7E-36 3.7E-41 309.8 24.4 254 21-354 4-271 (280)
344 cd05050 PTKc_Musk Catalytic do 100.0 1.5E-36 3.2E-41 311.9 23.4 252 22-354 4-284 (288)
345 cd05057 PTKc_EGFR_like Catalyt 100.0 2.5E-36 5.4E-41 308.8 24.8 252 21-354 5-263 (279)
346 cd05047 PTKc_Tie Catalytic dom 100.0 1.4E-36 3E-41 309.4 22.6 242 29-354 1-263 (270)
347 PF07714 Pkinase_Tyr: Protein 100.0 9.6E-37 2.1E-41 309.5 21.1 248 26-354 2-257 (259)
348 cd05074 PTKc_Tyro3 Catalytic d 100.0 1.6E-36 3.5E-41 308.3 22.6 256 25-355 1-268 (273)
349 PHA02882 putative serine/threo 100.0 3.4E-36 7.4E-41 311.3 25.2 266 21-354 10-291 (294)
350 cd05041 PTKc_Fes_like Catalyti 100.0 2.2E-36 4.8E-41 303.5 22.8 244 29-354 1-247 (251)
351 cd05576 STKc_RPK118_like Catal 100.0 9.3E-37 2E-41 305.4 19.9 228 34-358 4-237 (237)
352 cd05095 PTKc_DDR2 Catalytic do 100.0 3.1E-36 6.7E-41 311.2 24.1 206 22-236 4-239 (296)
353 cd05085 PTKc_Fer Catalytic dom 100.0 4.5E-36 9.8E-41 301.1 24.4 243 29-354 1-246 (250)
354 cd05046 PTK_CCK4 Pseudokinase 100.0 4.2E-36 9.1E-41 305.9 24.2 252 23-355 5-272 (275)
355 cd05110 PTKc_HER4 Catalytic do 100.0 5.2E-36 1.1E-40 310.9 23.5 253 21-355 5-264 (303)
356 cd05042 PTKc_Aatyk Catalytic d 100.0 7.1E-36 1.5E-40 303.5 23.9 204 29-239 1-218 (269)
357 cd05083 PTKc_Chk Catalytic dom 100.0 6.1E-36 1.3E-40 301.4 22.9 240 23-354 6-249 (254)
358 cd05058 PTKc_Met_Ron Catalytic 100.0 7.2E-36 1.6E-40 301.7 22.9 248 29-355 1-255 (262)
359 cd05107 PTKc_PDGFR_beta Cataly 100.0 4.7E-36 1E-40 324.1 22.8 254 22-355 36-395 (401)
360 KOG0193 Serine/threonine prote 100.0 2.8E-37 6E-42 329.1 13.0 254 22-354 391-648 (678)
361 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 2E-36 4.4E-41 306.1 18.2 191 29-234 1-209 (258)
362 KOG0608 Warts/lats-like serine 100.0 6.6E-37 1.4E-41 325.3 15.0 263 23-362 629-935 (1034)
363 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 1.5E-35 3.3E-40 301.3 24.4 201 29-236 1-215 (269)
364 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 9E-36 1.9E-40 304.0 22.5 207 22-234 3-215 (284)
365 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 8.1E-36 1.8E-40 303.1 21.8 192 29-235 1-214 (262)
366 KOG0696 Serine/threonine prote 100.0 1E-36 2.3E-41 310.8 15.0 258 21-361 347-612 (683)
367 KOG0614 cGMP-dependent protein 100.0 1.3E-37 2.8E-42 324.4 7.7 259 22-362 419-684 (732)
368 KOG1167 Serine/threonine prote 100.0 1.3E-36 2.8E-41 313.1 14.6 301 21-361 34-387 (418)
369 cd08528 STKc_Nek10 Catalytic d 100.0 2.2E-35 4.7E-40 299.6 23.2 250 24-355 1-266 (269)
370 cd05044 PTKc_c-ros Catalytic d 100.0 1.1E-35 2.4E-40 301.5 20.7 245 29-354 1-265 (269)
371 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 1.5E-35 3.3E-40 298.2 21.2 190 29-234 1-210 (259)
372 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 1.6E-35 3.5E-40 303.0 21.0 191 30-235 2-226 (274)
373 cd05086 PTKc_Aatyk2 Catalytic 100.0 1.2E-34 2.5E-39 295.2 24.9 204 30-240 2-218 (268)
374 KOG1151 Tousled-like protein k 100.0 9.8E-37 2.1E-41 313.1 7.3 274 15-360 455-746 (775)
375 KOG0587 Traf2- and Nck-interac 100.0 3.9E-35 8.4E-40 323.2 20.4 265 20-360 16-287 (953)
376 KOG4721 Serine/threonine prote 100.0 4.4E-36 9.5E-41 316.1 12.3 185 28-234 129-314 (904)
377 KOG1006 Mitogen-activated prot 100.0 1.2E-36 2.6E-41 296.2 6.5 262 25-363 66-335 (361)
378 KOG1187 Serine/threonine prote 100.0 9.5E-35 2.1E-39 308.5 21.4 202 21-234 73-281 (361)
379 KOG1026 Nerve growth factor re 100.0 3.9E-35 8.4E-40 324.7 14.7 249 23-352 486-755 (774)
380 PLN03224 probable serine/threo 100.0 7.5E-34 1.6E-38 312.4 23.8 278 21-360 143-505 (507)
381 smart00220 S_TKc Serine/Threon 100.0 1.8E-33 3.9E-38 277.7 23.3 242 35-358 1-244 (244)
382 KOG0695 Serine/threonine prote 100.0 9.8E-35 2.1E-39 289.9 14.0 200 23-232 250-452 (593)
383 KOG0194 Protein tyrosine kinas 100.0 1.7E-34 3.7E-39 310.2 16.8 256 23-361 157-420 (474)
384 KOG4250 TANK binding protein k 100.0 1.9E-34 4.1E-39 312.6 13.1 209 19-233 9-226 (732)
385 KOG1027 Serine/threonine prote 100.0 9.9E-35 2.1E-39 318.7 10.9 247 28-360 514-772 (903)
386 KOG1095 Protein tyrosine kinas 100.0 2.7E-33 5.8E-38 320.1 20.6 252 22-354 691-956 (1025)
387 KOG4278 Protein tyrosine kinas 100.0 4.4E-32 9.5E-37 287.8 21.1 246 24-353 268-517 (1157)
388 KOG4257 Focal adhesion tyrosin 100.0 7.6E-33 1.6E-37 294.3 14.1 245 27-354 393-644 (974)
389 KOG0199 ACK and related non-re 100.0 6.9E-33 1.5E-37 297.8 12.8 253 22-355 109-368 (1039)
390 KOG0984 Mitogen-activated prot 100.0 1.8E-32 3.8E-37 258.7 10.4 211 24-244 47-266 (282)
391 KOG0196 Tyrosine kinase, EPH ( 100.0 1.3E-32 2.8E-37 299.3 10.9 261 15-355 621-887 (996)
392 KOG1094 Discoidin domain recep 100.0 3.6E-32 7.8E-37 287.8 13.5 262 22-360 537-803 (807)
393 KOG0576 Mitogen-activated prot 100.0 3.8E-33 8.2E-38 299.4 5.8 269 13-360 6-276 (829)
394 KOG1152 Signal transduction se 100.0 4.6E-32 9.9E-37 286.9 12.0 200 22-232 560-770 (772)
395 PLN00113 leucine-rich repeat r 100.0 4.2E-31 9.1E-36 315.6 20.5 187 23-233 690-880 (968)
396 KOG3653 Transforming growth fa 100.0 1.7E-30 3.6E-35 270.6 15.1 200 22-232 209-425 (534)
397 KOG1345 Serine/threonine kinas 100.0 1.3E-30 2.7E-35 254.8 8.0 262 19-359 20-291 (378)
398 cd00180 PKc Catalytic domain o 100.0 1.7E-28 3.6E-33 235.6 21.3 184 31-224 1-187 (215)
399 PLN00181 protein SPA1-RELATED; 100.0 2.6E-30 5.7E-35 302.3 10.5 210 77-362 27-272 (793)
400 smart00221 STYKc Protein kinas 100.0 1.9E-28 4.2E-33 240.1 20.7 212 25-245 1-216 (225)
401 KOG0200 Fibroblast/platelet-de 100.0 1.9E-28 4.2E-33 277.5 22.1 247 26-354 299-574 (609)
402 KOG2052 Activin A type IB rece 100.0 2.1E-28 4.6E-33 253.3 18.5 206 11-226 199-421 (513)
403 KOG1025 Epidermal growth facto 100.0 6.2E-28 1.3E-32 263.7 14.7 247 26-354 699-952 (1177)
404 KOG0590 Checkpoint kinase and 99.9 8.1E-29 1.8E-33 278.0 6.1 269 23-363 317-593 (601)
405 smart00750 KIND kinase non-cat 99.9 1.1E-26 2.4E-31 221.3 12.3 107 111-235 1-108 (176)
406 COG0515 SPS1 Serine/threonine 99.9 4.3E-25 9.4E-30 223.7 23.8 266 25-362 2-282 (384)
407 PRK09188 serine/threonine prot 99.9 4.3E-25 9.4E-30 233.8 15.0 181 20-215 15-210 (365)
408 KOG1024 Receptor-like protein 99.9 3E-23 6.4E-28 211.8 13.4 253 22-354 283-550 (563)
409 KOG1164 Casein kinase (serine/ 99.9 2.2E-22 4.7E-27 211.5 18.5 206 24-237 19-243 (322)
410 KOG1163 Casein kinase (serine/ 99.9 6E-23 1.3E-27 198.3 11.9 217 17-244 9-234 (341)
411 KOG1240 Protein kinase contain 99.9 1.4E-23 3.1E-28 236.2 8.3 201 24-232 24-240 (1431)
412 KOG0603 Ribosomal protein S6 k 99.9 5E-24 1.1E-28 230.2 3.4 240 30-363 1-251 (612)
413 KOG0606 Microtubule-associated 99.9 3.2E-23 6.9E-28 233.4 9.7 229 20-363 80-323 (1205)
414 PF14531 Kinase-like: Kinase-l 99.9 2.2E-22 4.9E-27 205.2 13.2 207 23-235 12-254 (288)
415 cd05147 RIO1_euk RIO kinase fa 99.9 2.3E-22 5E-27 195.5 9.9 140 28-176 2-167 (190)
416 PRK10359 lipopolysaccharide co 99.9 7E-22 1.5E-26 196.0 10.6 175 22-225 30-216 (232)
417 KOG1165 Casein kinase (serine/ 99.9 9.4E-21 2E-25 190.5 18.4 226 20-256 25-264 (449)
418 cd05145 RIO1_like RIO kinase f 99.9 2.7E-21 5.9E-26 187.9 12.8 141 27-176 1-167 (190)
419 KOG4158 BRPK/PTEN-induced prot 99.8 7.6E-21 1.7E-25 194.8 11.0 211 23-235 157-461 (598)
420 PRK10345 hypothetical protein; 99.8 1.2E-19 2.6E-24 178.7 13.4 136 28-173 7-156 (210)
421 PRK12274 serine/threonine prot 99.8 1.1E-19 2.4E-24 177.0 12.6 189 26-235 5-211 (218)
422 smart00090 RIO RIO-like kinase 99.8 2.5E-19 5.5E-24 180.1 9.9 148 20-175 25-197 (237)
423 KOG1033 eIF-2alpha kinase PEK/ 99.8 6.1E-20 1.3E-24 195.3 5.4 200 20-226 241-457 (516)
424 KOG1166 Mitotic checkpoint ser 99.8 3.6E-19 7.8E-24 204.6 10.9 193 22-228 697-900 (974)
425 KOG0590 Checkpoint kinase and 99.8 3.8E-20 8.1E-25 208.2 1.2 265 22-360 19-291 (601)
426 PRK14879 serine/threonine prot 99.8 3.2E-18 6.9E-23 168.1 12.1 135 29-175 2-143 (211)
427 cd05144 RIO2_C RIO kinase fami 99.7 1.6E-17 3.5E-22 162.2 9.5 139 24-176 16-175 (198)
428 KOG1023 Natriuretic peptide re 99.7 3.1E-17 6.7E-22 177.6 11.0 305 76-472 1-317 (484)
429 TIGR03724 arch_bud32 Kae1-asso 99.7 5.8E-17 1.3E-21 157.8 11.1 131 30-175 1-138 (199)
430 PRK09605 bifunctional UGMP fam 99.7 1.2E-16 2.7E-21 179.2 12.6 139 22-176 332-477 (535)
431 cd05119 RIO RIO kinase family, 99.7 9.2E-17 2E-21 154.7 9.4 136 28-176 2-164 (187)
432 KOG0195 Integrin-linked kinase 99.7 5.6E-17 1.2E-21 159.3 6.5 242 24-353 191-440 (448)
433 PRK01723 3-deoxy-D-manno-octul 99.6 2.8E-15 6.2E-20 151.0 12.9 139 29-175 37-191 (239)
434 KOG0601 Cyclin-dependent kinas 99.6 8E-16 1.7E-20 166.8 7.6 258 22-360 113-384 (524)
435 cd05120 APH_ChoK_like Aminogly 99.6 1.2E-14 2.7E-19 132.7 11.0 131 27-175 2-138 (155)
436 KOG0606 Microtubule-associated 99.5 3.7E-15 8.1E-20 168.9 4.5 264 22-362 803-1099(1205)
437 PRK04750 ubiB putative ubiquin 99.4 3.4E-13 7.5E-18 149.5 7.7 141 24-176 121-314 (537)
438 KOG1266 Protein kinase [Signal 99.4 1.1E-13 2.4E-18 139.8 2.0 188 38-228 81-279 (458)
439 KOG1243 Protein kinase [Genera 99.4 6E-12 1.3E-16 138.1 14.6 184 25-227 15-199 (690)
440 cd05146 RIO3_euk RIO kinase fa 99.3 3.9E-12 8.4E-17 123.8 10.1 139 28-176 2-174 (197)
441 TIGR01982 UbiB 2-polyprenylphe 99.3 8.1E-12 1.7E-16 136.6 12.0 140 29-176 123-307 (437)
442 cd05151 ChoK Choline Kinase (C 99.3 5.3E-12 1.1E-16 119.2 8.9 126 28-174 3-135 (170)
443 KOG0601 Cyclin-dependent kinas 99.3 7E-12 1.5E-16 136.4 8.2 198 22-231 264-466 (524)
444 KOG3741 Poly(A) ribonuclease s 99.1 1E-09 2.2E-14 117.4 15.6 169 35-228 288-473 (655)
445 cd05154 ACAD10_11_like Acyl-Co 99.0 1.1E-09 2.4E-14 107.6 11.3 142 29-175 4-206 (223)
446 KOG3087 Serine/threonine prote 99.0 1.7E-09 3.8E-14 102.2 11.3 142 27-175 11-165 (229)
447 COG3642 Mn2+-dependent serine/ 99.0 2.8E-09 6.1E-14 101.2 11.1 130 29-175 2-140 (204)
448 PRK15123 lipopolysaccharide co 98.9 8.8E-09 1.9E-13 105.4 12.9 135 38-174 37-193 (268)
449 PF06293 Kdo: Lipopolysacchari 98.9 9.7E-09 2.1E-13 101.2 12.1 139 36-175 17-170 (206)
450 PF01163 RIO1: RIO1 family; I 98.9 6.5E-09 1.4E-13 100.7 10.2 127 38-176 1-156 (188)
451 KOG2137 Protein kinase [Signal 98.9 8.3E-10 1.8E-14 122.0 4.0 153 137-360 110-270 (700)
452 COG0478 RIO-like serine/threon 98.7 6.4E-08 1.4E-12 97.1 9.5 137 24-175 92-251 (304)
453 PRK09902 hypothetical protein; 98.6 5.8E-07 1.2E-11 88.2 11.8 141 32-175 27-179 (216)
454 PF06176 WaaY: Lipopolysacchar 98.4 1.7E-06 3.6E-11 85.3 10.6 143 22-175 30-183 (229)
455 COG4248 Uncharacterized protei 98.3 5.1E-06 1.1E-10 87.6 12.9 194 27-234 15-225 (637)
456 COG1718 RIO1 Serine/threonine 98.3 3.4E-06 7.4E-11 84.1 10.3 137 28-176 53-216 (268)
457 KOG1035 eIF-2alpha kinase GCN2 98.2 5.8E-06 1.3E-10 96.5 10.4 155 70-229 230-390 (1351)
458 COG0661 AarF Predicted unusual 98.2 5.8E-06 1.3E-10 91.7 9.7 135 29-176 131-315 (517)
459 PF01636 APH: Phosphotransfera 98.2 1.6E-05 3.6E-10 78.2 11.9 139 28-174 2-196 (239)
460 TIGR02172 Fb_sc_TIGR02172 Fibr 98.2 1.9E-05 4.1E-10 79.0 12.0 130 29-174 7-181 (226)
461 PF13095 FTA2: Kinetochore Sim 98.1 1.8E-05 3.9E-10 77.1 9.4 133 22-173 36-206 (207)
462 KOG0576 Mitogen-activated prot 97.9 2.5E-06 5.3E-11 94.0 -0.5 187 21-231 240-430 (829)
463 cd05150 APH Aminoglycoside 3'- 97.8 0.00012 2.6E-09 73.7 10.8 132 31-174 6-192 (244)
464 PLN02876 acyl-CoA dehydrogenas 97.8 0.0002 4.3E-09 84.9 13.2 83 27-112 42-129 (822)
465 COG2112 Predicted Ser/Thr prot 97.7 0.00014 3E-09 69.1 7.8 135 20-175 19-155 (201)
466 cd05155 APH_ChoK_like_1 Unchar 97.6 0.00028 6E-09 70.8 10.2 31 144-174 163-193 (235)
467 KOG1093 Predicted protein kina 97.6 0.00028 6.1E-09 76.7 10.3 177 64-361 24-200 (725)
468 KOG1235 Predicted unusual prot 97.6 0.0005 1.1E-08 76.5 12.6 139 29-176 167-355 (538)
469 PF10707 YrbL-PhoP_reg: PhoP r 97.6 0.00065 1.4E-08 66.5 11.5 128 29-169 7-165 (199)
470 KOG1826 Ras GTPase activating 97.5 8.8E-05 1.9E-09 88.7 5.2 154 70-231 1277-1440(2724)
471 PF12260 PIP49_C: Protein-kina 97.3 0.00064 1.4E-08 66.0 7.0 97 71-176 8-112 (188)
472 cd05157 ETNK_euk Ethanolamine 97.2 0.0053 1.1E-07 61.2 13.5 72 28-111 3-76 (235)
473 PRK09550 mtnK methylthioribose 97.2 0.0058 1.3E-07 66.1 14.4 77 28-111 31-115 (401)
474 TIGR00938 thrB_alt homoserine 97.2 0.0015 3.3E-08 68.1 9.7 153 15-174 15-216 (307)
475 cd05153 HomoserineK_II Homoser 97.2 0.0011 2.4E-08 68.5 8.5 151 16-174 8-204 (296)
476 PRK05231 homoserine kinase; Pr 97.1 0.0033 7.2E-08 65.9 11.0 150 16-174 16-216 (319)
477 KOG2268 Serine/threonine prote 97.1 0.00031 6.6E-09 72.6 2.8 138 22-175 91-251 (465)
478 TIGR02721 ycfN_thiK thiamine k 97.0 0.0022 4.8E-08 65.0 8.5 130 31-174 4-174 (256)
479 cd05156 ChoK_euk Choline Kinas 97.0 0.0035 7.7E-08 65.1 10.2 30 145-174 179-212 (302)
480 PRK10593 hypothetical protein; 96.9 0.012 2.6E-07 61.3 12.7 80 24-111 15-97 (297)
481 KOG2270 Serine/threonine prote 96.7 0.0053 1.1E-07 64.7 8.4 139 26-174 147-312 (520)
482 COG3173 Predicted aminoglycosi 96.3 0.037 8E-07 58.1 11.6 148 23-176 25-229 (321)
483 TIGR02906 spore_CotS spore coa 96.3 0.025 5.5E-07 58.8 10.3 29 145-174 187-215 (313)
484 TIGR01767 MTRK 5-methylthiorib 96.3 0.043 9.4E-07 58.5 12.0 82 30-118 2-93 (370)
485 TIGR02904 spore_ysxE spore coa 96.0 0.052 1.1E-06 56.8 11.1 30 146-175 197-226 (309)
486 cd05152 MPH2' Macrolide 2'-Pho 96.0 0.085 1.9E-06 54.4 12.4 31 145-175 185-216 (276)
487 PRK12396 5-methylribose kinase 96.0 0.043 9.2E-07 59.2 10.3 92 20-119 27-127 (409)
488 PLN02421 phosphotransferase, a 96.0 0.055 1.2E-06 57.3 11.2 28 147-174 184-212 (330)
489 PLN02236 choline kinase 95.9 0.058 1.3E-06 57.5 10.8 139 23-174 37-230 (344)
490 PTZ00384 choline kinase; Provi 94.3 0.51 1.1E-05 51.1 12.3 29 145-174 227-255 (383)
491 PLN02756 S-methyl-5-thioribose 94.1 0.57 1.2E-05 50.9 12.2 76 27-111 36-119 (418)
492 PF07387 Seadorna_VP7: Seadorn 94.0 0.16 3.5E-06 50.4 7.0 100 49-173 86-190 (308)
493 PRK06148 hypothetical protein; 93.1 0.54 1.2E-05 57.2 11.2 31 145-175 203-236 (1013)
494 PF05445 Pox_ser-thr_kin: Poxv 93.1 0.19 4.1E-06 52.9 6.1 75 102-176 246-347 (434)
495 PHA03111 Ser/Thr kinase; Provi 93.1 0.19 4.2E-06 52.6 6.1 76 101-176 249-351 (444)
496 PTZ00296 choline kinase; Provi 92.6 1 2.2E-05 49.6 11.5 28 146-174 285-312 (442)
497 COG5072 ALK1 Serine/threonine 92.5 0.21 4.6E-06 52.9 5.7 73 98-175 297-370 (488)
498 COG0510 ycfN Thiamine kinase a 91.5 0.28 6.1E-06 50.4 5.1 49 127-175 133-183 (269)
499 PF03881 Fructosamin_kin: Fruc 90.8 1.6 3.5E-05 45.3 10.1 75 24-110 18-95 (288)
500 smart00587 CHK ZnF_C4 abd HLH 90.0 0.46 1E-05 46.2 5.0 32 143-174 118-154 (196)
No 1
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-80 Score=628.03 Aligned_cols=342 Identities=60% Similarity=0.995 Sum_probs=323.7
Q ss_pred cccCCCCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCc
Q 007541 17 TEYGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSR 96 (599)
Q Consensus 17 ~~~~~~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~ 96 (599)
+.+....+|..++.||+|+||+||+|.++.||+.||||+|.+.|.+...+++.+||+++|++++|+||+.+++++.+++.
T Consensus 16 ~~~~i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~ 95 (359)
T KOG0660|consen 16 ELFEIPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSR 95 (359)
T ss_pred eEEeccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccc
Confidence 45677888888999999999999999999999999999999999999999999999999999999999999999998888
Q ss_pred CCCccEEEEEecCCcCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccc
Q 007541 97 REFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVA 176 (599)
Q Consensus 97 ~~~~~iylV~E~~~g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~ 176 (599)
+.++++|+|+|+|+.||+++|+++..|++++++.++||||+||+|+||+||+||||||.|||+|.+|.+||||||+||..
T Consensus 96 ~~f~DvYiV~elMetDL~~iik~~~~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n~~c~lKI~DFGLAR~~ 175 (359)
T KOG0660|consen 96 DKFNDVYLVFELMETDLHQIIKSQQDLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNADCDLKICDFGLARYL 175 (359)
T ss_pred cccceeEEehhHHhhHHHHHHHcCccccHHHHHHHHHHHHHhcchhhcccccccccchhheeeccCCCEEeccccceeec
Confidence 89999999999999999999999988999999999999999999999999999999999999999999999999999998
Q ss_pred cCCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHH
Q 007541 177 FNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIA 256 (599)
Q Consensus 177 ~~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~ 256 (599)
... ....++|.|+.|+||||||++... ..|+.++||||+||||+|||+|+++|+|++..+|+.+|..++|+|+++.+.
T Consensus 176 ~~~-~~~~~mTeYVaTRWYRAPElll~~-~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~ 253 (359)
T KOG0660|consen 176 DKF-FEDGFMTEYVATRWYRAPELLLNS-SEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQ 253 (359)
T ss_pred ccc-CcccchhcceeeeeecCHHHHhcc-ccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHH
Confidence 665 556678999999999999999764 899999999999999999999999999999999999999999999999998
Q ss_pred HHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHH
Q 007541 257 RVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLE 336 (599)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~ 336 (599)
+ +.++.+++|+++++...+.+|+.+|+++++.|+|||+
T Consensus 254 ~------------------------------------------i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLle 291 (359)
T KOG0660|consen 254 K------------------------------------------IRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLE 291 (359)
T ss_pred H------------------------------------------hccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHH
Confidence 8 8889999999999999999999999999999999999
Q ss_pred HhcccCCCCCCCHHHHhcCccccCcccCCCCCCCCCCCcchhhHhhhcCCHHHHHHHHHHHHHhhChhhH
Q 007541 337 RMLAFEPKDRPTAEEALADPYFKGLAKVEREPSAQPVTKMEFEFERRRITKEDVRELIYREILEYHPQML 406 (599)
Q Consensus 337 ~mL~~DP~~RpTa~e~L~HP~f~~~~~~~~~p~~~~~~~~~~~~e~~~~~~e~~~~~i~~e~~~~~~~~~ 406 (599)
+||.+||.+|+||+|||+||||..++++++||++++.... ++.. .+.+++++++++|++.|+|+..
T Consensus 292 kmL~fdP~kRita~eAL~hPYl~~~hdp~dEP~~~~~~~~---~~~~-~~~~~~r~~i~~e~~~~~~~~~ 357 (359)
T KOG0660|consen 292 KMLVFDPKKRITAEEALAHPYLAPYHDPEDEPVCQPIFDS---FEHE-LTEEELRELIYKEILDFHPDVS 357 (359)
T ss_pred HHhccCccccCCHHHHhcChhhhhhcCCccCCCCCCCCcc---cccc-ccHHHHHHHHHHHHHhhCcccc
Confidence 9999999999999999999999999999999988876443 4455 8999999999999999998753
No 2
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=1.7e-63 Score=484.07 Aligned_cols=289 Identities=43% Similarity=0.710 Sum_probs=252.5
Q ss_pred CceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccE
Q 007541 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDI 102 (599)
Q Consensus 23 ~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~i 102 (599)
.||..+++||+|.||+||+|+|..||+.||||+|+.......-....+|||++|+.++|+||+.|+++|... ..+
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~-----~~l 76 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHK-----SNL 76 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCC-----Cce
Confidence 689999999999999999999999999999999986533333345678999999999999999999999443 479
Q ss_pred EEEEecCCcCHHHHHHhCC-CCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCCCC
Q 007541 103 YVVFELMESDLHQVIKAND-DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTP 181 (599)
Q Consensus 103 ylV~E~~~g~L~~~i~~~~-~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~~ 181 (599)
.||+|||+.||..+|+... .++..+++.|+.++++||+|||+++|+||||||.|+|++++|.+||+|||+|+.......
T Consensus 77 ~lVfEfm~tdLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~ 156 (318)
T KOG0659|consen 77 SLVFEFMPTDLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNR 156 (318)
T ss_pred EEEEEeccccHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEcCCCcEEeecccchhccCCCCc
Confidence 9999999999999998764 789999999999999999999999999999999999999999999999999998865443
Q ss_pred CcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHhhh
Q 007541 182 TAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVCLL 261 (599)
Q Consensus 182 ~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~~~ 261 (599)
. .+..+.|+||||||++.+. ..|+..+||||+|||++||+.|.|+|+|+++.+|+..|+..+|+|.++.|..++.+
T Consensus 157 ~---~~~~V~TRWYRAPELLfGs-r~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~l 232 (318)
T KOG0659|consen 157 I---QTHQVVTRWYRAPELLFGS-RQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSL 232 (318)
T ss_pred c---cccceeeeeccChHHhccc-hhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCcccccc
Confidence 3 3455999999999998775 78999999999999999999999999999999999999999999999987664332
Q ss_pred hhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHhccc
Q 007541 262 LNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAF 341 (599)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL~~ 341 (599)
.. |. .+......+...+|+.++..+.|||.+||.+
T Consensus 233 pd--------------------------------------------Y~-~~~~~P~~~~~~lf~aas~d~ldLl~~m~~y 267 (318)
T KOG0659|consen 233 PD--------------------------------------------YV-KIQQFPKPPLNNLFPAASSDALDLLSKMLTY 267 (318)
T ss_pred cc--------------------------------------------HH-HHhcCCCCccccccccccHHHHHHHHhhhcc
Confidence 22 11 1223344556668999999999999999999
Q ss_pred CCCCCCCHHHHhcCccccCcccCC
Q 007541 342 EPKDRPTAEEALADPYFKGLAKVE 365 (599)
Q Consensus 342 DP~~RpTa~e~L~HP~f~~~~~~~ 365 (599)
||.+|+|+.|+|+|+||+....+.
T Consensus 268 nP~~Rita~qaL~~~yf~~~P~pt 291 (318)
T KOG0659|consen 268 NPKKRITASQALKHPYFKSLPLPT 291 (318)
T ss_pred CchhcccHHHHhcchhhhcCCCCC
Confidence 999999999999999999865443
No 3
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=3e-63 Score=489.33 Aligned_cols=289 Identities=37% Similarity=0.688 Sum_probs=247.0
Q ss_pred CceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccE
Q 007541 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDI 102 (599)
Q Consensus 23 ~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~i 102 (599)
++|+.+.++|+|+||+|++|+++.||+.||||++.....+..-.+-.+|||++|++|+|+|+|.|+++| +-.+.+
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVF-----rrkrkl 76 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVF-----RRKRKL 76 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHH-----Hhccee
Confidence 579999999999999999999999999999999976555444456678999999999999999999999 445689
Q ss_pred EEEEecCCcCHHHHHHhC-CCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCCCC
Q 007541 103 YVVFELMESDLHQVIKAN-DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTP 181 (599)
Q Consensus 103 ylV~E~~~g~L~~~i~~~-~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~~ 181 (599)
|||||||+.++.+.+... .+++++.++.+++|++.|+.|||++++|||||||+||||+.+|.+||||||+||....
T Consensus 77 hLVFE~~dhTvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~--- 153 (396)
T KOG0593|consen 77 HLVFEYCDHTVLHELERYPNGVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILITQNGVVKLCDFGFARTLSA--- 153 (396)
T ss_pred EEEeeecchHHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEEecCCcEEeccchhhHhhcC---
Confidence 999999998887777765 4799999999999999999999999999999999999999999999999999998743
Q ss_pred CcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHhhh
Q 007541 182 TAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVCLL 261 (599)
Q Consensus 182 ~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~~~ 261 (599)
....+|+|+.|+||||||++.+- ..|+.++|||++||+++||++|.++|+|.++++|+..|.+.+|...+..+.-...
T Consensus 154 pgd~YTDYVATRWYRaPELLvGD-tqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~- 231 (396)
T KOG0593|consen 154 PGDNYTDYVATRWYRAPELLVGD-TQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSS- 231 (396)
T ss_pred CcchhhhhhhhhhccChhhhccc-CcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhcc-
Confidence 23457999999999999998663 7899999999999999999999999999999999999999999998876543100
Q ss_pred hhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHhccc
Q 007541 262 LNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAF 341 (599)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL~~ 341 (599)
++.+.|.. --....+.++...+++++..+.||+++||..
T Consensus 232 -N~~F~Gv~----------------------------------------lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~ 270 (396)
T KOG0593|consen 232 -NPFFHGVR----------------------------------------LPEPEHPEPLERKYPKISNVLLDLLKKCLKM 270 (396)
T ss_pred -CCceeeee----------------------------------------cCCCCCccchhhhcccchHHHHHHHHHHhcC
Confidence 00000000 0001224456677889999999999999999
Q ss_pred CCCCCCCHHHHhcCccccCcc
Q 007541 342 EPKDRPTAEEALADPYFKGLA 362 (599)
Q Consensus 342 DP~~RpTa~e~L~HP~f~~~~ 362 (599)
||.+|+|-+|+|.||||.++.
T Consensus 271 dP~~R~sc~qll~H~yFd~~~ 291 (396)
T KOG0593|consen 271 DPDDRLSCEQLLHHPYFDGFI 291 (396)
T ss_pred CccccccHHHHhcChHHHHHH
Confidence 999999999999999997664
No 4
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-62 Score=509.20 Aligned_cols=290 Identities=39% Similarity=0.670 Sum_probs=254.8
Q ss_pred CCCCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcC-CCCccccceeecCCCcCC
Q 007541 20 GEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLR-HPDIVEIKHILLPPSRRE 98 (599)
Q Consensus 20 ~~~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~-HpnIv~l~~v~~~~s~~~ 98 (599)
...+||.++++||.|+||.||+|..+.+|+.||||++++.+..-.+.-+ +||+..|++|+ |||||+|++++.+.
T Consensus 7 ~~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~n-LREvksL~kln~hpniikL~Evi~d~---- 81 (538)
T KOG0661|consen 7 IFMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMN-LREVKSLRKLNPHPNIIKLKEVIRDN---- 81 (538)
T ss_pred hHHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHH-HHHHHHHHhcCCCCcchhhHHHhhcc----
Confidence 4467999999999999999999999999999999999987766544443 59999999999 99999999999543
Q ss_pred CccEEEEEecCCcCHHHHHHhCC-CCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCcccccc
Q 007541 99 FKDIYVVFELMESDLHQVIKAND-DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAF 177 (599)
Q Consensus 99 ~~~iylV~E~~~g~L~~~i~~~~-~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~ 177 (599)
++++|+|||||+.+|+++++..+ .+++..++.|++||++||+|+|.+|++||||||+||||..+..|||+||||||...
T Consensus 82 ~~~L~fVfE~Md~NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~~~~~iKiaDFGLARev~ 161 (538)
T KOG0661|consen 82 DRILYFVFEFMDCNLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILISGNDVIKIADFGLAREVR 161 (538)
T ss_pred CceEeeeHHhhhhhHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEecccceeEecccccccccc
Confidence 23899999999999999998764 78999999999999999999999999999999999999999999999999999875
Q ss_pred CCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHH
Q 007541 178 NDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIAR 257 (599)
Q Consensus 178 ~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~ 257 (599)
+.. .+|.|+-||||||||+++.. ..|+.++|||++|||++|+.+-+++|+|.+..+|+.+|++++|+|..+.|..
T Consensus 162 Skp----PYTeYVSTRWYRAPEvLLrs-~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~e 236 (538)
T KOG0661|consen 162 SKP----PYTEYVSTRWYRAPEVLLRS-GYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPE 236 (538)
T ss_pred cCC----CcchhhhcccccchHHhhhc-cccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchh
Confidence 443 46899999999999998764 7899999999999999999999999999999999999999999999887654
Q ss_pred HhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHH
Q 007541 258 VCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLER 337 (599)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~ 337 (599)
... .++..--.++...+.++..+++++++++.+||.+
T Consensus 237 g~~-------------------------------------------La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ 273 (538)
T KOG0661|consen 237 GYN-------------------------------------------LASAMNFRFPQVKPSPLKDLLPNASSEAASLIER 273 (538)
T ss_pred HHH-------------------------------------------HHHHhccCCCcCCCCChHHhCcccCHHHHHHHHH
Confidence 111 1111112345566778889999999999999999
Q ss_pred hcccCCCCCCCHHHHhcCccccCcc
Q 007541 338 MLAFEPKDRPTAEEALADPYFKGLA 362 (599)
Q Consensus 338 mL~~DP~~RpTa~e~L~HP~f~~~~ 362 (599)
||.|||.+||||+|+|+||||+.-.
T Consensus 274 ll~WDP~kRpTA~~al~~pffq~~~ 298 (538)
T KOG0661|consen 274 LLAWDPDKRPTASQALQHPFFQVGR 298 (538)
T ss_pred HhcCCCccCccHHHHhcCccccccc
Confidence 9999999999999999999998643
No 5
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.5e-61 Score=505.00 Aligned_cols=288 Identities=37% Similarity=0.598 Sum_probs=249.7
Q ss_pred CCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCcc
Q 007541 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKD 101 (599)
Q Consensus 22 ~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~ 101 (599)
.+.|+.+++||+|+||.||+|++..||+.||+|+|...........-..|||.||+.|.||||++|.+++... ....
T Consensus 116 ~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~---~~~s 192 (560)
T KOG0600|consen 116 ADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSK---LSGS 192 (560)
T ss_pred hHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEec---CCce
Confidence 5789999999999999999999999999999999986655666677788999999999999999999999765 2358
Q ss_pred EEEEEecCCcCHHHHHHhCC-CCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCCC
Q 007541 102 IYVVFELMESDLHQVIKAND-DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT 180 (599)
Q Consensus 102 iylV~E~~~g~L~~~i~~~~-~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~ 180 (599)
+|||||||+.||..++...+ .+++.++++|++||+.||.|||++||+|||||..|||||.+|.+||+|||||+.+....
T Consensus 193 iYlVFeYMdhDL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~~ 272 (560)
T KOG0600|consen 193 IYLVFEYMDHDLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILIDNNGVLKIADFGLARFYTPSG 272 (560)
T ss_pred EEEEEecccchhhhhhcCCCcccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEEcCCCCEEeccccceeeccCCC
Confidence 99999999999999998754 79999999999999999999999999999999999999999999999999999765433
Q ss_pred CCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHhh
Q 007541 181 PTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVCL 260 (599)
Q Consensus 181 ~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~~ 260 (599)
. ..+|..+.|.||||||++++. ..|+.++|+||+||||+||++|+++|+|.+.++|+.+|++++|.|+++.|....+
T Consensus 273 ~--~~~T~rVvTLWYRpPELLLG~-t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~kL 349 (560)
T KOG0600|consen 273 S--APYTSRVVTLWYRPPELLLGA-TSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSKL 349 (560)
T ss_pred C--cccccceEEeeccChHHhcCC-cccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccccccC
Confidence 2 237899999999999998875 8999999999999999999999999999999999999999999999988763111
Q ss_pred hhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhccc--CCCCCCCCCCCCCCHHHHHHHHHh
Q 007541 261 LLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRK--KKPIPFSQKFPNANPLALRLLERM 338 (599)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~s~~a~dLL~~m 338 (599)
.... .+.. .-...+.+.|..+++.+++||..|
T Consensus 350 P~~~----------------------------------------------~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~l 383 (560)
T KOG0600|consen 350 PHAT----------------------------------------------IFKPQQPYKRRLRETFKDFPASALDLLEKL 383 (560)
T ss_pred Cccc----------------------------------------------ccCCCCcccchHHHHhccCCHHHHHHHHHH
Confidence 1000 0000 001224455678899999999999
Q ss_pred cccCCCCCCCHHHHhcCccccCc
Q 007541 339 LAFEPKDRPTAEEALADPYFKGL 361 (599)
Q Consensus 339 L~~DP~~RpTa~e~L~HP~f~~~ 361 (599)
|.+||.+|.||.++|+|+||..-
T Consensus 384 L~ldP~kR~tA~~aL~seyF~t~ 406 (560)
T KOG0600|consen 384 LSLDPDKRGTASSALQSEYFTTE 406 (560)
T ss_pred hccCccccccHHHHhcCcccccC
Confidence 99999999999999999999543
No 6
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=1.5e-61 Score=482.85 Aligned_cols=295 Identities=39% Similarity=0.631 Sum_probs=252.3
Q ss_pred CCCCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCC
Q 007541 20 GEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREF 99 (599)
Q Consensus 20 ~~~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~ 99 (599)
.--+.|+.+..|++|+||+||+|+|++|++.||+|+++...+...-.-.-+|||.+|.+++|||||.+.+|.... +.
T Consensus 73 rsv~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~---~~ 149 (419)
T KOG0663|consen 73 RSVEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGS---NM 149 (419)
T ss_pred ccHHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEecc---cc
Confidence 345789999999999999999999999999999999987655555555678999999999999999999999754 33
Q ss_pred ccEEEEEecCCcCHHHHHHhCC-CCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccC
Q 007541 100 KDIYVVFELMESDLHQVIKAND-DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFN 178 (599)
Q Consensus 100 ~~iylV~E~~~g~L~~~i~~~~-~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~ 178 (599)
+.+|||||||+.||..++..-+ ++...+++.++.|+|+||+|||.++|+||||||+|+|++..|.+||+|||+||.+++
T Consensus 150 d~iy~VMe~~EhDLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygs 229 (419)
T KOG0663|consen 150 DKIYIVMEYVEHDLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLSHKGILKIADFGLAREYGS 229 (419)
T ss_pred ceeeeeHHHHHhhHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheeeccCCcEEecccchhhhhcC
Confidence 5799999999999999998865 899999999999999999999999999999999999999999999999999998865
Q ss_pred CCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHH
Q 007541 179 DTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARV 258 (599)
Q Consensus 179 ~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~ 258 (599)
.. ..+|..+.|.||||||++++. ..|++++||||+|||++|||+++|+|+|++..+|+++|++++|+|+...
T Consensus 230 p~---k~~T~lVVTLWYRaPELLLG~-~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~i---- 301 (419)
T KOG0663|consen 230 PL---KPYTPLVVTLWYRAPELLLGA-KTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAI---- 301 (419)
T ss_pred Cc---ccCcceEEEeeecCHHHhcCC-cccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCcccc----
Confidence 43 346888999999999998875 7899999999999999999999999999999999999999999999864
Q ss_pred hhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCC--CCHHHHHHHH
Q 007541 259 CLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPN--ANPLALRLLE 336 (599)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~s~~a~dLL~ 336 (599)
|.|+.+.-.+.. -.+.......+...|+. .++.+.|||.
T Consensus 302 -------wpg~~~lp~~k~--------------------------------~~f~~~pyn~lr~kF~~~~lse~g~~Lln 342 (419)
T KOG0663|consen 302 -------WPGYSELPAVKK--------------------------------MTFSEHPYNNLRKKFGALSLSEQGFDLLN 342 (419)
T ss_pred -------CCCccccchhhc--------------------------------cccCCCCchhhhhhccccccchhHHHHHH
Confidence 666665432100 00111122223344444 4589999999
Q ss_pred HhcccCCCCCCCHHHHhcCccccCcccC
Q 007541 337 RMLAFEPKDRPTAEEALADPYFKGLAKV 364 (599)
Q Consensus 337 ~mL~~DP~~RpTa~e~L~HP~f~~~~~~ 364 (599)
++|.+||.+|+||+|+|+|+||.....+
T Consensus 343 ~llt~dP~kR~tA~~~L~h~~F~e~P~p 370 (419)
T KOG0663|consen 343 KLLTYDPGKRITAEDGLKHEYFRETPLP 370 (419)
T ss_pred HHhccCccccccHHHhhcccccccCCCC
Confidence 9999999999999999999999986543
No 7
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=4.2e-58 Score=482.21 Aligned_cols=338 Identities=94% Similarity=1.478 Sum_probs=302.7
Q ss_pred ceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEE
Q 007541 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIY 103 (599)
Q Consensus 24 rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~iy 103 (599)
||++.++||+|+||.||+|+++.+|+.||||++...........++.+|+.+|+.++||||+++++++......+..++|
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 80 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY 80 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence 69999999999999999999999999999999976555555667788999999999999999999998766555666899
Q ss_pred EEEecCCcCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCCCCCc
Q 007541 104 VVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTA 183 (599)
Q Consensus 104 lV~E~~~g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~~~~ 183 (599)
+|||||+++|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.........
T Consensus 81 lv~e~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~ 160 (338)
T cd07859 81 VVFELMESDLHQVIKANDDLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTA 160 (338)
T ss_pred EEEecCCCCHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEccCccccccccccCcc
Confidence 99999999999999988889999999999999999999999999999999999999999999999999998654433333
Q ss_pred ccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHhhhhh
Q 007541 184 IFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVCLLLN 263 (599)
Q Consensus 184 ~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~~~~~ 263 (599)
..+...++|++|+|||++.+....++.++|||||||++|+|++|++||.+.+...++..+.+.+|.++.+.+..
T Consensus 161 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~------ 234 (338)
T cd07859 161 IFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISR------ 234 (338)
T ss_pred ccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHH------
Confidence 34466789999999999865435789999999999999999999999999999999999999999999887766
Q ss_pred hhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHhcccCC
Q 007541 264 IIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEP 343 (599)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL~~DP 343 (599)
+.+.....++..+....+..+...++..++.+.+||.+||+.||
T Consensus 235 ------------------------------------i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P 278 (338)
T cd07859 235 ------------------------------------VRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDP 278 (338)
T ss_pred ------------------------------------hhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCc
Confidence 44555666777777777777788888899999999999999999
Q ss_pred CCCCCHHHHhcCccccCcccCCCCCCCCCCCcchhhHhhhcCCHHHHHHHHHHHHHhhCh
Q 007541 344 KDRPTAEEALADPYFKGLAKVEREPSAQPVTKMEFEFERRRITKEDVRELIYREILEYHP 403 (599)
Q Consensus 344 ~~RpTa~e~L~HP~f~~~~~~~~~p~~~~~~~~~~~~e~~~~~~e~~~~~i~~e~~~~~~ 403 (599)
.+|||++|+|+||||+++......+...+....++.++.+.++.+++++.+++++++|||
T Consensus 279 ~~Rpt~~e~l~hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (338)
T cd07859 279 KDRPTAEEALADPYFKGLAKVEREPSAQPITKLEFEFERRRLTKEDVRELIYREILEYHP 338 (338)
T ss_pred ccCCCHHHHhcCchhhhcCccccccccCccccccccHHHHhcCHHHHHHHHHHHHHhcCC
Confidence 999999999999999999888888888999999999999999999999999999999997
No 8
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=6.3e-59 Score=471.36 Aligned_cols=285 Identities=40% Similarity=0.683 Sum_probs=245.9
Q ss_pred ceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEE
Q 007541 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIY 103 (599)
Q Consensus 24 rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~iy 103 (599)
.|.-.+++|.|+||+||.|....+++.||||++-.... --.+|+.+|+.+.|||||+|+.+|......+.-++.
T Consensus 25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r------~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~ln 98 (364)
T KOG0658|consen 25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKR------YKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLN 98 (364)
T ss_pred EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCC------cCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHH
Confidence 58889999999999999999999999999999853211 112899999999999999999999765543345788
Q ss_pred EEEecCCcCHHHHHHh----CCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCC-CceeeeccCccccccC
Q 007541 104 VVFELMESDLHQVIKA----NDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANAD-CKLKICDFGLARVAFN 178 (599)
Q Consensus 104 lV~E~~~g~L~~~i~~----~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~-~~lKL~DFGlA~~~~~ 178 (599)
+|||||+.+|.++++. +..++.-+++-+.+||++||+|||+.||+||||||+|||||.+ |.+||||||+|+....
T Consensus 99 lVleymP~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~~ 178 (364)
T KOG0658|consen 99 LVLEYMPETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVDPDTGVLKICDFGSAKVLVK 178 (364)
T ss_pred HHHHhchHHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEcCCCCeEEeccCCcceeecc
Confidence 9999999999999984 5689999999999999999999999999999999999999987 9999999999998866
Q ss_pred CCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHH
Q 007541 179 DTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARV 258 (599)
Q Consensus 179 ~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~ 258 (599)
+.++ ..|..||.|||||++.+. ..|+.++||||+|||++||+.|+++|+|++..+|+.+|++++|+|+.+++..+
T Consensus 179 ~epn----iSYicSRyYRaPELifga-~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~m 253 (364)
T KOG0658|consen 179 GEPN----ISYICSRYYRAPELIFGA-TEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSM 253 (364)
T ss_pred CCCc----eeEEEeccccCHHHHcCc-cccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhc
Confidence 5554 678999999999999875 89999999999999999999999999999999999999999999999999873
Q ss_pred hhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCC-CCCCCCHHHHHHHHH
Q 007541 259 CLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQ-KFPNANPLALRLLER 337 (599)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~a~dLL~~ 337 (599)
+. .+.+ ...++.+..++.+ .+...++++.||+.+
T Consensus 254 n~-------~y~~--------------------------------------~~~p~ik~~~~~~~~~~~~~~d~~dll~~ 288 (364)
T KOG0658|consen 254 NP-------NYTE--------------------------------------FKFPQIKAHPWHKVFFKRLPPDALDLLSK 288 (364)
T ss_pred Cc-------cccc--------------------------------------ccCcccccccceeecccCCCHHHHHHHHH
Confidence 21 1111 1122233444444 456789999999999
Q ss_pred hcccCCCCCCCHHHHhcCccccCcccC
Q 007541 338 MLAFEPKDRPTAEEALADPYFKGLAKV 364 (599)
Q Consensus 338 mL~~DP~~RpTa~e~L~HP~f~~~~~~ 364 (599)
+|+++|.+|.|+.|+|.||||..+.++
T Consensus 289 ~L~Y~P~~R~~~~~~l~h~fFdelr~~ 315 (364)
T KOG0658|consen 289 LLQYSPSKRLSALEALAHPFFDELRDP 315 (364)
T ss_pred HhccChhhcCCHHHHhcchhhHHhhCc
Confidence 999999999999999999999998765
No 9
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=6.2e-58 Score=467.87 Aligned_cols=265 Identities=35% Similarity=0.590 Sum_probs=222.2
Q ss_pred CCCCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccCh-----hhHHHHHHHHHHHHhcCCCCccccceeecCC
Q 007541 20 GEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHV-----SDATRILREIKLLRLLRHPDIVEIKHILLPP 94 (599)
Q Consensus 20 ~~~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~-----~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~ 94 (599)
...+.|.+.+.||+|+||.|.+|.++.||+.||||+|++..... .....+.+|+++|+.|+|||||+++++|..+
T Consensus 169 s~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ 248 (475)
T KOG0615|consen 169 SFNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVP 248 (475)
T ss_pred hhcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecC
Confidence 35788999999999999999999999999999999998543222 1334578999999999999999999999544
Q ss_pred CcCCCccEEEEEecCC-cCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCC---Cceeeecc
Q 007541 95 SRREFKDIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANAD---CKLKICDF 170 (599)
Q Consensus 95 s~~~~~~iylV~E~~~-g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~---~~lKL~DF 170 (599)
...|||||||+ |+|++.+..++.+.++..+.+++||+.||+|||++||+||||||+|||++.+ +.+||+||
T Consensus 249 -----ds~YmVlE~v~GGeLfd~vv~nk~l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~e~~llKItDF 323 (475)
T KOG0615|consen 249 -----DSSYMVLEYVEGGELFDKVVANKYLREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDAEDCLLKITDF 323 (475)
T ss_pred -----CceEEEEEEecCccHHHHHHhccccccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccCCcceEEEeccc
Confidence 46799999999 6999999999999999999999999999999999999999999999999877 89999999
Q ss_pred CccccccCCCCCcccccccccCccccCccccccccCCCC-cchhhHhHHHHHHHHHhCCCCCCCCChhh-HHHHHHHhcC
Q 007541 171 GLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYT-PAIDIWSIGCIFAELLTGKPLFPGKNVVH-QLDIMTDLLG 248 (599)
Q Consensus 171 GlA~~~~~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys-~~~DIWSlG~Il~eLltG~~pF~g~~~~~-~l~~I~~~lG 248 (599)
|+|+..++ ..++.+.|||+.|.|||++.+....+. .++||||||||||.+|+|.+||.+....- ..++|.+
T Consensus 324 GlAK~~g~----~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~--- 396 (475)
T KOG0615|consen 324 GLAKVSGE----GSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILK--- 396 (475)
T ss_pred chhhcccc----ceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHHHhc---
Confidence 99998653 335678899999999999865333444 48999999999999999999998764322 2232221
Q ss_pred CCCHHHHHHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCC
Q 007541 249 TPSPEAIARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNAN 328 (599)
Q Consensus 249 ~p~~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 328 (599)
.+.......|..++
T Consensus 397 ------------------------------------------------------------------G~y~f~p~~w~~Is 410 (475)
T KOG0615|consen 397 ------------------------------------------------------------------GRYAFGPLQWDRIS 410 (475)
T ss_pred ------------------------------------------------------------------CcccccChhhhhhh
Confidence 11111223445688
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHhcCccccCcc
Q 007541 329 PLALRLLERMLAFEPKDRPTAEEALADPYFKGLA 362 (599)
Q Consensus 329 ~~a~dLL~~mL~~DP~~RpTa~e~L~HP~f~~~~ 362 (599)
.++++||.+||..||++|||++|||+||||+...
T Consensus 411 eea~dlI~~mL~VdP~~R~s~~eaL~hpW~~~~~ 444 (475)
T KOG0615|consen 411 EEALDLINWMLVVDPENRPSADEALNHPWFKDAP 444 (475)
T ss_pred HHHHHHHHHhhEeCcccCcCHHHHhcChhhhccc
Confidence 9999999999999999999999999999999653
No 10
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-56 Score=445.09 Aligned_cols=339 Identities=38% Similarity=0.683 Sum_probs=290.1
Q ss_pred cccCCCCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCC-C
Q 007541 17 TEYGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPP-S 95 (599)
Q Consensus 17 ~~~~~~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~-s 95 (599)
+.+.+..||.-++.+|.|.- .|..|.|..+++.||||++...+.+...+.+..||..+|..++|+||++++.+|.+. .
T Consensus 11 s~ftv~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~ 89 (369)
T KOG0665|consen 11 STFTVPKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKT 89 (369)
T ss_pred cceeeeeeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCcccc
Confidence 34567889999999999998 999999999999999999998888888899999999999999999999999999764 3
Q ss_pred cCCCccEEEEEecCCcCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCcccc
Q 007541 96 RREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARV 175 (599)
Q Consensus 96 ~~~~~~iylV~E~~~g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~ 175 (599)
..++..+|+|||||..+|.+++. ..+..+.++++++|+++|++|||+.||+||||||+||+++.+|.+||+|||+|+.
T Consensus 90 l~~~~e~y~v~e~m~~nl~~vi~--~elDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~~~~~lKi~dfg~ar~ 167 (369)
T KOG0665|consen 90 LEEFQEVYLVMELMDANLCQVIL--MELDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVNSDCTLKILDFGLART 167 (369)
T ss_pred HHHHHhHHHHHHhhhhHHHHHHH--HhcchHHHHHHHHHHHHHHHHHHhcceeecccCcccceecchhheeeccchhhcc
Confidence 36678999999999999999998 3588899999999999999999999999999999999999999999999999987
Q ss_pred ccCCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHH
Q 007541 176 AFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAI 255 (599)
Q Consensus 176 ~~~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i 255 (599)
...+ ..+++|+.|++|+|||++.+ ..|...+||||+|||++||++|+.+|+|++..+|..+|.+.+|+|.+.++
T Consensus 168 e~~~----~~mtpyVvtRyyrapevil~--~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~ 241 (369)
T KOG0665|consen 168 EDTD----FMMTPYVVTRYYRAPEVILG--MGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFM 241 (369)
T ss_pred cCcc----cccCchhheeeccCchheec--cCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHH
Confidence 5322 46799999999999999988 45999999999999999999999999999999999999999999999998
Q ss_pred HHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCC---------
Q 007541 256 ARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPN--------- 326 (599)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 326 (599)
+++. ..++.|+.++.+.....++..||+
T Consensus 242 ~qL~-------------------------------------------~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~ 278 (369)
T KOG0665|consen 242 KQLQ-------------------------------------------PTVRNYVENRPQYQAISFSELFPDSLFPVVLEG 278 (369)
T ss_pred HHhh-------------------------------------------HHHHHHhhcChHhhccchhhhCCcccccccccC
Confidence 8743 223344444443333444444433
Q ss_pred ---CCHHHHHHHHHhcccCCCCCCCHHHHhcCccccCcccCCCCCCCCCCCcchhhHhhhcCCHHHHHHHHHHHHHhhCh
Q 007541 327 ---ANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKVEREPSAQPVTKMEFEFERRRITKEDVRELIYREILEYHP 403 (599)
Q Consensus 327 ---~s~~a~dLL~~mL~~DP~~RpTa~e~L~HP~f~~~~~~~~~p~~~~~~~~~~~~e~~~~~~e~~~~~i~~e~~~~~~ 403 (599)
....|.||+.+||..||++|+|++++|.||||+-| -..+++..++....+..++.+..+.++|+++|++|+.+|.+
T Consensus 279 ~~~~~~~ardll~~MLvi~pe~Risv~daL~HPY~~vw-~~~~ev~ap~pe~~d~~~d~~~~t~~e~ke~If~ev~~f~~ 357 (369)
T KOG0665|consen 279 SKLDCSLARDLLSKMLVIDPEKRISVDDALRHPYIKVW-YDPDEVEAPPPEIYDKQLDEREHTIEEWKELIFKEVQRFEE 357 (369)
T ss_pred CccchHHHHHHHHHhhccChhhcccHHHHhcCCeeeee-cccccccCCCCchhhhhcccccCCHHHHHHHHHHHHHhhcc
Confidence 34689999999999999999999999999999944 34455555554445566777888999999999999999987
Q ss_pred hhHHh
Q 007541 404 QMLKE 408 (599)
Q Consensus 404 ~~~~~ 408 (599)
....+
T Consensus 358 ~~~~~ 362 (369)
T KOG0665|consen 358 FNKNN 362 (369)
T ss_pred cccch
Confidence 54333
No 11
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=2.1e-56 Score=453.45 Aligned_cols=294 Identities=38% Similarity=0.676 Sum_probs=247.5
Q ss_pred CCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCC-ccccceeecCCCc-CCC
Q 007541 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPD-IVEIKHILLPPSR-REF 99 (599)
Q Consensus 22 ~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~Hpn-Iv~l~~v~~~~s~-~~~ 99 (599)
...|+.+++||+|+||+||+|+++.+|+.||+|++........-.....||+.+|+.|+|+| |+.|++++..... +..
T Consensus 10 ~~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~ 89 (323)
T KOG0594|consen 10 MFDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGI 89 (323)
T ss_pred HHHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeeccccccc
Confidence 45677888999999999999999999999999999865554334455679999999999999 9999999976542 233
Q ss_pred ccEEEEEecCCcCHHHHHHhCC----CCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCcccc
Q 007541 100 KDIYVVFELMESDLHQVIKAND----DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARV 175 (599)
Q Consensus 100 ~~iylV~E~~~g~L~~~i~~~~----~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~ 175 (599)
..+||||||++.+|.+++...+ .++...++.+++||++||+|||++||+||||||+||||+++|.+||+|||+|+.
T Consensus 90 ~~l~lvfe~~d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~~~G~lKlaDFGlAra 169 (323)
T KOG0594|consen 90 GKLYLVFEFLDRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLISSSGVLKLADFGLARA 169 (323)
T ss_pred ceEEEEEEeecccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEECCCCcEeeeccchHHH
Confidence 4799999999999999998755 688899999999999999999999999999999999999999999999999996
Q ss_pred ccCCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHH
Q 007541 176 AFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAI 255 (599)
Q Consensus 176 ~~~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i 255 (599)
..-.. ..++.-++|.||||||++.+. ..|++.+||||+|||++||++++++|+|.++.+|+..|.+++|+|+.+.|
T Consensus 170 ~~ip~---~~yt~evvTlWYRaPEvLlGs-~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~W 245 (323)
T KOG0594|consen 170 FSIPM---RTYTPEVVTLWYRAPEVLLGS-TSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDW 245 (323)
T ss_pred hcCCc---ccccccEEEeeccCHHHhcCC-CcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCC
Confidence 53222 235778999999999998774 67999999999999999999999999999999999999999999999765
Q ss_pred HHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCC-CCCCCCCCCCCCHHHHHH
Q 007541 256 ARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKK-PIPFSQKFPNANPLALRL 334 (599)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~s~~a~dL 334 (599)
.....+... + ...+... +..+....++.++.+.||
T Consensus 246 p~v~~~~~~-----k---------------------------------------~~f~~~~~~~~l~~~~~~~~~~~~dl 281 (323)
T KOG0594|consen 246 PGVSSLPDY-----K---------------------------------------APFPKWPGPKDLSSILPKLDPDGIEL 281 (323)
T ss_pred CCccccccc-----c---------------------------------------ccCcCCCCccchHHhccccCccHHHH
Confidence 442211110 0 0111222 455666667778899999
Q ss_pred HHHhcccCCCCCCCHHHHhcCccccCccc
Q 007541 335 LERMLAFEPKDRPTAEEALADPYFKGLAK 363 (599)
Q Consensus 335 L~~mL~~DP~~RpTa~e~L~HP~f~~~~~ 363 (599)
+.+||++||.+|+||+.+|+||||..+..
T Consensus 282 l~~~L~y~p~~R~Sa~~al~h~yf~~~~~ 310 (323)
T KOG0594|consen 282 LSKLLQYDPAKRISAKGALTHPYFSELPE 310 (323)
T ss_pred HHHHhccCcccCcCHHHHhcChhhccccc
Confidence 99999999999999999999999998753
No 12
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=2e-54 Score=466.41 Aligned_cols=313 Identities=34% Similarity=0.590 Sum_probs=246.7
Q ss_pred CCCCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcC-C-----CCccccceeecC
Q 007541 20 GEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLR-H-----PDIVEIKHILLP 93 (599)
Q Consensus 20 ~~~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~-H-----pnIv~l~~v~~~ 93 (599)
.++.||+|+++||+|+||.|.+|.|..|++.||||+|++ +.....+...|+.+|..|+ | -|+|+++++|..
T Consensus 183 ~i~~rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN---~k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~f 259 (586)
T KOG0667|consen 183 HIAYRYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKN---KKRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYF 259 (586)
T ss_pred eeEEEEEEEEEecccccceeEEEEecCCCcEEEEEeecc---ChHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeecccc
Confidence 345699999999999999999999999999999999985 3445566778999999997 4 379999999965
Q ss_pred CCcCCCccEEEEEecCCcCHHHHHHhCC--CCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCC--Cceeeec
Q 007541 94 PSRREFKDIYVVFELMESDLHQVIKAND--DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANAD--CKLKICD 169 (599)
Q Consensus 94 ~s~~~~~~iylV~E~~~g~L~~~i~~~~--~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~--~~lKL~D 169 (599)
. +|+|||||+++.+|+++|+.+. +++...++.|+.||+.||.+||+.||||+||||||||+..- +.|||+|
T Consensus 260 r-----~HlciVfELL~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~~r~~vKVID 334 (586)
T KOG0667|consen 260 R-----NHLCIVFELLSTNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDPKRSRIKVID 334 (586)
T ss_pred c-----cceeeeehhhhhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccCCcCceeEEe
Confidence 4 5899999999999999999875 78999999999999999999999999999999999998764 5799999
Q ss_pred cCccccccCCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCC
Q 007541 170 FGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGT 249 (599)
Q Consensus 170 FGlA~~~~~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~ 249 (599)
||+|...... ...|+.++.|||||+|++ ..|+.++||||||||++||++|.|+|+|.+..+|+..|.+++|.
T Consensus 335 FGSSc~~~q~------vytYiQSRfYRAPEVILG--lpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~ 406 (586)
T KOG0667|consen 335 FGSSCFESQR------VYTYIQSRFYRAPEVILG--LPYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVLGL 406 (586)
T ss_pred cccccccCCc------ceeeeeccccccchhhcc--CCCCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHhCC
Confidence 9999764221 237899999999999998 79999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCC-----CCCCCC
Q 007541 250 PSPEAIARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPI-----PFSQKF 324 (599)
Q Consensus 250 p~~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~ 324 (599)
|++..++..+... .++.+. .++.... .+ -...........++++......... .+....
T Consensus 407 Pp~~mL~~~~~~~--------kff~~~--~~~~~~~-----~~-~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~ 470 (586)
T KOG0667|consen 407 PPPKMLDTAKKAH--------KFFTSL--KGFPRLC-----VE-TSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGL 470 (586)
T ss_pred CCHHHHHhccccc--------eehhcc--CCceeee-----ee-ecccccccchhhhhhhhhhcccccCCCCCcccchhc
Confidence 9999988743322 122111 0000000 00 0000001223344444443333222 233333
Q ss_pred C-CCCHHHHHHHHHhcccCCCCCCCHHHHhcCccccCcccC
Q 007541 325 P-NANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKV 364 (599)
Q Consensus 325 ~-~~s~~a~dLL~~mL~~DP~~RpTa~e~L~HP~f~~~~~~ 364 (599)
+ .....++|||++||.|||.+|+|+.|+|+||||.+....
T Consensus 471 ~~~~~~~F~dflk~~L~~dP~~R~tp~qal~Hpfl~~~~~~ 511 (586)
T KOG0667|consen 471 PKADDKLFIDFLKRCLEWDPAERITPAQALNHPFLTGTSLE 511 (586)
T ss_pred ccccHHHHHHHHHHHhccCchhcCCHHHHhcCccccccccc
Confidence 4 344577999999999999999999999999999976543
No 13
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=7.7e-54 Score=457.34 Aligned_cols=264 Identities=33% Similarity=0.555 Sum_probs=233.7
Q ss_pred CCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCc-ccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCc
Q 007541 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDI-FEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFK 100 (599)
Q Consensus 22 ~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~-~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~ 100 (599)
..+|...+.||+|+|+.||.+++..+|+.||+|+|.+. ..+....+++.+||.|.+.|+|||||+++++| ++.+
T Consensus 17 ~~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~F-----EDs~ 91 (592)
T KOG0575|consen 17 SKRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFF-----EDSN 91 (592)
T ss_pred cceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEe-----ecCC
Confidence 38899999999999999999999999999999999753 34556678899999999999999999999999 4556
Q ss_pred cEEEEEecCC-cCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCC
Q 007541 101 DIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFND 179 (599)
Q Consensus 101 ~iylV~E~~~-g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~ 179 (599)
++|||+|+|. ++|..+++..+.++|.++++|++||+.||.|||+++|+|||||..|||++++..|||+|||||.....+
T Consensus 92 nVYivLELC~~~sL~el~Krrk~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~ 171 (592)
T KOG0575|consen 92 NVYIVLELCHRGSLMELLKRRKPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYD 171 (592)
T ss_pred ceEEEEEecCCccHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheeecCcCcEEecccceeeeecCc
Confidence 8999999999 799999999899999999999999999999999999999999999999999999999999999887544
Q ss_pred CCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHh
Q 007541 180 TPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVC 259 (599)
Q Consensus 180 ~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~ 259 (599)
.. ...+.|||+.|.|||++.. .+.+..+||||+|||||.||.|+|||..++..+.+.+|...--.
T Consensus 172 ~E---rk~TlCGTPNYIAPEVl~k--~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~Ik~~~Y~---------- 236 (592)
T KOG0575|consen 172 GE---RKKTLCGTPNYIAPEVLNK--SGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKIKLNEYS---------- 236 (592)
T ss_pred cc---ccceecCCCcccChhHhcc--CCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHHHhcCcc----------
Confidence 22 2356799999999999987 78999999999999999999999999999888888777532111
Q ss_pred hhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHhc
Q 007541 260 LLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERML 339 (599)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL 339 (599)
....++..|.|||.+||
T Consensus 237 ---------------------------------------------------------------~P~~ls~~A~dLI~~lL 253 (592)
T KOG0575|consen 237 ---------------------------------------------------------------MPSHLSAEAKDLIRKLL 253 (592)
T ss_pred ---------------------------------------------------------------cccccCHHHHHHHHHHh
Confidence 11257889999999999
Q ss_pred ccCCCCCCCHHHHhcCccccCcccCCCCC
Q 007541 340 AFEPKDRPTAEEALADPYFKGLAKVEREP 368 (599)
Q Consensus 340 ~~DP~~RpTa~e~L~HP~f~~~~~~~~~p 368 (599)
+.||.+|||++++|.|+||+....+...|
T Consensus 254 ~~~P~~Rpsl~~vL~h~Ff~~g~~p~~lp 282 (592)
T KOG0575|consen 254 RPNPSERPSLDEVLDHPFFKSGFTPARLP 282 (592)
T ss_pred cCCcccCCCHHHHhcCHhhhCCCcCCCCC
Confidence 99999999999999999996655555444
No 14
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=2.6e-53 Score=419.81 Aligned_cols=301 Identities=37% Similarity=0.584 Sum_probs=237.3
Q ss_pred CCceEEEEEEeecCceEEEEEEECCCCc----EEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcC
Q 007541 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGE----KVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRR 97 (599)
Q Consensus 22 ~~rY~i~~~LG~G~~g~V~~a~d~~tg~----~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~ 97 (599)
-..|++++.||+|+||.||+|..+.++. .+|||+++.......-....-||+.+++.|+||||+.|..+|+..
T Consensus 23 l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~--- 99 (438)
T KOG0666|consen 23 LFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSH--- 99 (438)
T ss_pred HHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhcc---
Confidence 3568999999999999999997766643 689999975433323334556999999999999999999999753
Q ss_pred CCccEEEEEecCCcCHHHHHHhC-----CCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCC----Cceeee
Q 007541 98 EFKDIYVVFELMESDLHQVIKAN-----DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANAD----CKLKIC 168 (599)
Q Consensus 98 ~~~~iylV~E~~~g~L~~~i~~~-----~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~----~~lKL~ 168 (599)
...++|||||.+.||.++|+-+ ..++...++.|++||+.|+.|||++.|+||||||.||||..+ |.|||+
T Consensus 100 -d~~v~l~fdYAEhDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VKIa 178 (438)
T KOG0666|consen 100 -DKKVWLLFDYAEHDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPERGRVKIA 178 (438)
T ss_pred -CceEEEEehhhhhhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCCccCeeEee
Confidence 3589999999999999999743 358899999999999999999999999999999999999988 999999
Q ss_pred ccCccccccCCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCC---------hhhH
Q 007541 169 DFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKN---------VVHQ 239 (599)
Q Consensus 169 DFGlA~~~~~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~---------~~~~ 239 (599)
|||+||.+.+.-..-......+.|.||||||++++- ..|++++|||++|||++|||+-.|+|.|.. ..+|
T Consensus 179 DlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa-~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQ 257 (438)
T KOG0666|consen 179 DLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGA-RHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQ 257 (438)
T ss_pred cccHHHHhhccccccccCCceEEEEEecChHHhccc-ccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHH
Confidence 999999875543322234567899999999998774 789999999999999999999999998865 3589
Q ss_pred HHHHHHhcCCCCHHHHHHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCC
Q 007541 240 LDIMTDLLGTPSPEAIARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIP 319 (599)
Q Consensus 240 l~~I~~~lG~p~~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (599)
+++|++++|+|..+.|..+......... -..+..+ ...+-...+++.
T Consensus 258 l~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~-----------------------ls~f~~~-~~~n~sL~~~~~--------- 304 (438)
T KOG0666|consen 258 LDRIFEVLGTPTDKDWPDLKKMPEYQTL-----------------------LSDFRRH-YYDNVSLHKYYH--------- 304 (438)
T ss_pred HHHHHHHcCCCccccchhhhhCcchHHH-----------------------HHHhHHh-hcCcchHHHHHH---------
Confidence 9999999999999988765433321000 0000000 011111122222
Q ss_pred CCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccccCccc
Q 007541 320 FSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAK 363 (599)
Q Consensus 320 ~~~~~~~~s~~a~dLL~~mL~~DP~~RpTa~e~L~HP~f~~~~~ 363 (599)
....-++.+.+||.+||++||.+|+|++++|+|+||..-..
T Consensus 305 ---~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh~yF~~d~l 345 (438)
T KOG0666|consen 305 ---KHKVKDPSALDLLQKLLTYDPIKRITAEQALEHPYFTEDPL 345 (438)
T ss_pred ---HhcCCCchHHHHHHHHhccCchhhccHHHHhcccccccCCC
Confidence 22334566999999999999999999999999999986543
No 15
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=6.2e-53 Score=388.92 Aligned_cols=286 Identities=40% Similarity=0.657 Sum_probs=241.8
Q ss_pred CceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccE
Q 007541 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDI 102 (599)
Q Consensus 23 ~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~i 102 (599)
.+|.-.++||+|.||+|++|+++.|++.||+|.+........-....+|||-+|+.|+|.|||+++++.. ..+.+
T Consensus 2 ~~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlh-----sdkkl 76 (292)
T KOG0662|consen 2 QKYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLH-----SDKKL 76 (292)
T ss_pred cchHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhc-----cCcee
Confidence 3566788999999999999999999999999999765555555667889999999999999999999984 33579
Q ss_pred EEEEecCCcCHHHHHHh-CCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCCCC
Q 007541 103 YVVFELMESDLHQVIKA-NDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTP 181 (599)
Q Consensus 103 ylV~E~~~g~L~~~i~~-~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~~ 181 (599)
-+|||+|..+|..++.+ ++.+..+.++.++.|+++||.+||++++.||||||+|+||+.||.+||+|||+||..+- +
T Consensus 77 tlvfe~cdqdlkkyfdslng~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnllin~ngelkladfglarafgi--p 154 (292)
T KOG0662|consen 77 TLVFEFCDQDLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLINRNGELKLADFGLARAFGI--P 154 (292)
T ss_pred EEeHHHhhHHHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEeccCCcEEecccchhhhcCC--c
Confidence 99999999999999976 67899999999999999999999999999999999999999999999999999997542 2
Q ss_pred CcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHh-CCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHhh
Q 007541 182 TAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVCL 260 (599)
Q Consensus 182 ~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLlt-G~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~~ 260 (599)
. ..+..-+.|.||++|.++.+- ..|++.+||||.|||++|+.. |+++|+|.+..+|+.+|+..+|+|+.+.|..++.
T Consensus 155 v-rcysaevvtlwyrppdvlfga-kly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~ 232 (292)
T KOG0662|consen 155 V-RCYSAEVVTLWYRPPDVLFGA-KLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTK 232 (292)
T ss_pred e-EeeeceeeeeeccCcceeeee-ehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCcccc
Confidence 1 223456889999999998774 689999999999999999985 8999999999999999999999999987654322
Q ss_pred hhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhccc-CCCCCCCCCCCCCCHHHHHHHHHhc
Q 007541 261 LLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRK-KKPIPFSQKFPNANPLALRLLERML 339 (599)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~s~~a~dLL~~mL 339 (599)
+... +- .+. ..-..++++.|+.+...+|||+++|
T Consensus 233 lpdy-----k~----------------------------------------yp~ypattswsqivp~lns~grdllqkll 267 (292)
T KOG0662|consen 233 LPDY-----KP----------------------------------------YPIYPATTSWSQIVPKLNSTGRDLLQKLL 267 (292)
T ss_pred CCCC-----cc----------------------------------------cCCccccchHHHHhhhhcchhHHHHHHHh
Confidence 1110 00 000 0112345666788888999999999
Q ss_pred ccCCCCCCCHHHHhcCccccCcc
Q 007541 340 AFEPKDRPTAEEALADPYFKGLA 362 (599)
Q Consensus 340 ~~DP~~RpTa~e~L~HP~f~~~~ 362 (599)
.-+|..|++|+++|+||||.+..
T Consensus 268 ~cnp~qrisaeaalqhpyf~d~s 290 (292)
T KOG0662|consen 268 KCNPAQRISAEAALQHPYFSDFS 290 (292)
T ss_pred ccCcccccCHHHHhcCccccccC
Confidence 99999999999999999998753
No 16
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=8.5e-51 Score=428.51 Aligned_cols=336 Identities=57% Similarity=0.998 Sum_probs=287.9
Q ss_pred CCCCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCC
Q 007541 20 GEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREF 99 (599)
Q Consensus 20 ~~~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~ 99 (599)
..+++|.+.+.||+|+||+||+|++..+++.||||++...........++.+|+.+|+.++|+||+++++++.......+
T Consensus 2 ~~~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~ 81 (337)
T cd07858 2 EVDTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAF 81 (337)
T ss_pred ccccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheeccccccc
Confidence 46789999999999999999999999999999999997655444556677899999999999999999998876544555
Q ss_pred ccEEEEEecCCcCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCC
Q 007541 100 KDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFND 179 (599)
Q Consensus 100 ~~iylV~E~~~g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~ 179 (599)
.++|+|+||++++|.+++...+.+++..++.++.||+.||.|||++|++||||||+|||++.++.+||+|||+++.....
T Consensus 82 ~~~~lv~e~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~ 161 (337)
T cd07858 82 NDVYIVYELMDTDLHQIIRSSQTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSEK 161 (337)
T ss_pred CcEEEEEeCCCCCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECcCccccccCCC
Confidence 67999999999999999998888999999999999999999999999999999999999999999999999999865322
Q ss_pred CCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHh
Q 007541 180 TPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVC 259 (599)
Q Consensus 180 ~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~ 259 (599)
. .....+.++.+|+|||.+... ..++.++|||||||++++|++|++||.+.+....+..+...+|.+..+.+..
T Consensus 162 ~---~~~~~~~~~~~y~aPE~~~~~-~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~-- 235 (337)
T cd07858 162 G---DFMTEYVVTRWYRAPELLLNC-SEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGF-- 235 (337)
T ss_pred c---ccccccccccCccChHHHhcC-CCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhh--
Confidence 1 223456789999999987642 4588999999999999999999999999998999999999999988876643
Q ss_pred hhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHhc
Q 007541 260 LLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERML 339 (599)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL 339 (599)
+.+....+++..+.......+....+.+++.+.+||++||
T Consensus 236 ----------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l 275 (337)
T cd07858 236 ----------------------------------------IRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKML 275 (337)
T ss_pred ----------------------------------------cCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHh
Confidence 3344455566655555444555566788999999999999
Q ss_pred ccCCCCCCCHHHHhcCccccCcccCCCCCCCCCCCcchhhHhhhcCCHHHHHHHHHHHHHhhCh
Q 007541 340 AFEPKDRPTAEEALADPYFKGLAKVEREPSAQPVTKMEFEFERRRITKEDVRELIYREILEYHP 403 (599)
Q Consensus 340 ~~DP~~RpTa~e~L~HP~f~~~~~~~~~p~~~~~~~~~~~~e~~~~~~e~~~~~i~~e~~~~~~ 403 (599)
++||.+|||++|+|+||||..+..+..++..+ ..++++|+....++++++++++.|++.|||
T Consensus 276 ~~~P~~Rps~~ell~h~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (337)
T cd07858 276 VFDPSKRITVEEALAHPYLASLHDPSDEPVCQ--TPFSFDFEEDALTEEDIKELIYNEMLAYHP 337 (337)
T ss_pred cCChhhccCHHHHHcCcchhhhcCcccCccCC--CccchhhhhhhcCHHHHHHHHHHHHhhcCC
Confidence 99999999999999999999988777766654 356788888889999999999999999997
No 17
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=7.2e-52 Score=420.85 Aligned_cols=261 Identities=28% Similarity=0.494 Sum_probs=221.4
Q ss_pred CceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccE
Q 007541 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDI 102 (599)
Q Consensus 23 ~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~i 102 (599)
+..+.++.||+|..|+||+|+|+.|++.+|+|+|.. .......+.+.||+.+|+.++||+||+++++|.... ..+
T Consensus 79 ~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~-~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~----~~i 153 (364)
T KOG0581|consen 79 SDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILL-NIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNG----EEI 153 (364)
T ss_pred HHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecc-cCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCC----ceE
Confidence 367788999999999999999999999999999943 234455678999999999999999999999996543 159
Q ss_pred EEEEecCC-cCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhccc-CceEeecCCCCcEEeCCCCceeeeccCccccccCCC
Q 007541 103 YVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHT-ANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT 180 (599)
Q Consensus 103 ylV~E~~~-g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs-~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~ 180 (599)
+|+||||+ |+|.++++..++++|..+..++++|++||.|||. ++||||||||+|||||..|.|||||||.++...+.
T Consensus 154 sI~mEYMDgGSLd~~~k~~g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS- 232 (364)
T KOG0581|consen 154 SICMEYMDGGSLDDILKRVGRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNS- 232 (364)
T ss_pred EeehhhcCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeeccCCCEEeccccccHHhhhh-
Confidence 99999999 6999999998999999999999999999999995 99999999999999999999999999999877554
Q ss_pred CCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCC--ChhhHHHHHHHhcCCCCHHHHHHH
Q 007541 181 PTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGK--NVVHQLDIMTDLLGTPSPEAIARV 258 (599)
Q Consensus 181 ~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~--~~~~~l~~I~~~lG~p~~e~i~~~ 258 (599)
...+++||..|||||.+.+ ..|+.++||||||+.+.||.+|+.||+.. .....+.++..++..|++
T Consensus 233 ----~a~tfvGT~~YMsPERi~g--~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~ppP------ 300 (364)
T KOG0581|consen 233 ----IANTFVGTSAYMSPERISG--ESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVDEPPP------ 300 (364)
T ss_pred ----hcccccccccccChhhhcC--CcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhcCCCC------
Confidence 2356799999999999988 79999999999999999999999999774 222333333332222222
Q ss_pred hhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHh
Q 007541 259 CLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERM 338 (599)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~m 338 (599)
.+... .+|+++++||..|
T Consensus 301 ------------------------------------------------------------~lP~~--~fS~ef~~FV~~C 318 (364)
T KOG0581|consen 301 ------------------------------------------------------------RLPEG--EFSPEFRSFVSCC 318 (364)
T ss_pred ------------------------------------------------------------CCCcc--cCCHHHHHHHHHH
Confidence 11111 3789999999999
Q ss_pred cccCCCCCCCHHHHhcCccccCccc
Q 007541 339 LAFEPKDRPTAEEALADPYFKGLAK 363 (599)
Q Consensus 339 L~~DP~~RpTa~e~L~HP~f~~~~~ 363 (599)
|+.||.+|+|+.|+|+|||++....
T Consensus 319 L~Kdp~~R~s~~qLl~Hpfi~~~~~ 343 (364)
T KOG0581|consen 319 LRKDPSERPSAKQLLQHPFIKKFED 343 (364)
T ss_pred hcCCcccCCCHHHHhcCHHHhhccc
Confidence 9999999999999999999997643
No 18
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.7e-53 Score=411.31 Aligned_cols=287 Identities=44% Similarity=0.768 Sum_probs=249.9
Q ss_pred EEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEEEEEe
Q 007541 28 EEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVVFE 107 (599)
Q Consensus 28 ~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~iylV~E 107 (599)
-+.||.|+||+||.+.|.++|+.||+|++...+.+....++++||+++|-.++|.|++..+++..++...-+..+|+|+|
T Consensus 58 DRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~TE 137 (449)
T KOG0664|consen 58 DRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVLTE 137 (449)
T ss_pred CCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHHHH
Confidence 46799999999999999999999999999988888888899999999999999999999999998887677788999999
Q ss_pred cCCcCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCCCCCccccc
Q 007541 108 LMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWT 187 (599)
Q Consensus 108 ~~~g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~~~~~~~t 187 (599)
+|..||+.+|.+-..++.++++-|+|||++||+|||+.||.||||||.|+|||+||.+||||||+||....+ ....+|
T Consensus 138 LmQSDLHKIIVSPQ~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d--~~~hMT 215 (449)
T KOG0664|consen 138 LMQSDLHKIIVSPQALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLVNSNCILKICDFGLARTWDQR--DRLNMT 215 (449)
T ss_pred HHHhhhhheeccCCCCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEeccCceEEecccccccccchh--hhhhhH
Confidence 999999999999889999999999999999999999999999999999999999999999999999986433 234467
Q ss_pred ccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHhhhhhhhhc
Q 007541 188 DYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVCLLLNIIWC 267 (599)
Q Consensus 188 ~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~~~~~~~~~ 267 (599)
.-+.|.+|||||++.+. ..|+.++||||+||||+|||..+.+|...+.+.|++.|.+++|+|+.|.+...|....
T Consensus 216 qEVVTQYYRAPEiLMGa-RhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEGAk---- 290 (449)
T KOG0664|consen 216 HEVVTQYYRAPELLMGA-RRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEGAK---- 290 (449)
T ss_pred HHHHHHHhccHHHhhcc-hhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhhhH----
Confidence 77899999999998774 7899999999999999999999999999999999999999999999999988663222
Q ss_pred CCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCC-----CCCHHHHHHHHHhcccC
Q 007541 268 GYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFP-----NANPLALRLLERMLAFE 342 (599)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~s~~a~dLL~~mL~~D 342 (599)
..+-.-.. ++..+.-++. ...-++.+++.+||.+|
T Consensus 291 ---------------------------------------~H~LR~~~-k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d 330 (449)
T KOG0664|consen 291 ---------------------------------------NHVLRAGL-RAPDTQRLYKIASPDDKNHEAVDLLQKLLHFD 330 (449)
T ss_pred ---------------------------------------HHhhccCC-CCCCccceeeecCCcccchHHHHHHHHHhCCC
Confidence 11111111 1111221211 23457899999999999
Q ss_pred CCCCCCHHHHhcCccccCc
Q 007541 343 PKDRPTAEEALADPYFKGL 361 (599)
Q Consensus 343 P~~RpTa~e~L~HP~f~~~ 361 (599)
|.+|++.+++|.|+|....
T Consensus 331 ~dkris~~~A~~~~~~~e~ 349 (449)
T KOG0664|consen 331 PDKRISVEEALQHRYLEEG 349 (449)
T ss_pred CcccccHhhhccccccccc
Confidence 9999999999999999753
No 19
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.2e-51 Score=439.55 Aligned_cols=263 Identities=31% Similarity=0.510 Sum_probs=230.7
Q ss_pred CCCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCccc-ChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCC
Q 007541 21 EGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFE-HVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREF 99 (599)
Q Consensus 21 ~~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~-~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~ 99 (599)
.-+-|++++.||.|+.|.|.+|.|..||+.+|||+|.+... .......|.+||.+|+.+.||||++|+++| ++.
T Consensus 10 tiGpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVw-----e~~ 84 (786)
T KOG0588|consen 10 TIGPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVW-----ENK 84 (786)
T ss_pred cccceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeee-----ccC
Confidence 44679999999999999999999999999999999986533 334567899999999999999999999999 455
Q ss_pred ccEEEEEecCC-cCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccC
Q 007541 100 KDIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFN 178 (599)
Q Consensus 100 ~~iylV~E~~~-g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~ 178 (599)
.++|+|.||++ |.|++++...|++++.++.+||+||+.||.|||..+||||||||+|+|++..+.|||+|||.|....+
T Consensus 85 ~~lylvlEyv~gGELFdylv~kG~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~ 164 (786)
T KOG0588|consen 85 QHLYLVLEYVPGGELFDYLVRKGPLPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLLDVKNNIKIADFGMASLEVP 164 (786)
T ss_pred ceEEEEEEecCCchhHHHHHhhCCCCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhhhcccCEeeeccceeecccC
Confidence 68999999999 69999999999999999999999999999999999999999999999999999999999999976433
Q ss_pred CCCCcccccccccCccccCccccccccCCC-CcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHH
Q 007541 179 DTPTAIFWTDYVATRWYRAPELCGSFFSKY-TPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIAR 257 (599)
Q Consensus 179 ~~~~~~~~t~~~gt~~Y~APE~l~~~~~~y-s~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~ 257 (599)
...+.++||+++|.|||++.+ ..| +.++||||+|+|||.||+|+.||.++|....+.++..-.
T Consensus 165 ----gklLeTSCGSPHYA~PEIV~G--~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~LLlKV~~G~---------- 228 (786)
T KOG0588|consen 165 ----GKLLETSCGSPHYAAPEIVSG--RPYDGRPSDVWSCGVILFALLTGKLPFDDDNIRVLLLKVQRGV---------- 228 (786)
T ss_pred ----CccccccCCCcccCCchhhcC--CCCCCCccccchhHHHHHHHHhCCCCCCCccHHHHHHHHHcCc----------
Confidence 335678899999999999988 454 568999999999999999999999888777766664311
Q ss_pred HhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHH
Q 007541 258 VCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLER 337 (599)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~ 337 (599)
.+...+++++|+|||.+
T Consensus 229 ---------------------------------------------------------------f~MPs~Is~eaQdLLr~ 245 (786)
T KOG0588|consen 229 ---------------------------------------------------------------FEMPSNISSEAQDLLRR 245 (786)
T ss_pred ---------------------------------------------------------------ccCCCcCCHHHHHHHHH
Confidence 11224689999999999
Q ss_pred hcccCCCCCCCHHHHhcCccccCcccCCCC
Q 007541 338 MLAFEPKDRPTAEEALADPYFKGLAKVERE 367 (599)
Q Consensus 338 mL~~DP~~RpTa~e~L~HP~f~~~~~~~~~ 367 (599)
||.+||.+|+|.+|+++|||+.+.......
T Consensus 246 ml~VDp~~RiT~~eI~kHP~l~g~~~~~~~ 275 (786)
T KOG0588|consen 246 MLDVDPSTRITTEEILKHPFLSGYTSLPSS 275 (786)
T ss_pred HhccCccccccHHHHhhCchhhcCCCCChh
Confidence 999999999999999999999988665433
No 20
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=4.9e-50 Score=423.32 Aligned_cols=331 Identities=44% Similarity=0.829 Sum_probs=269.0
Q ss_pred cCCCCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCC-cC
Q 007541 19 YGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPS-RR 97 (599)
Q Consensus 19 ~~~~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s-~~ 97 (599)
+...++|++++.||+|+||+||+|.+..+++.||||++............+.+|+.+|+.++|+||+++++++.... ..
T Consensus 11 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 90 (343)
T cd07878 11 WEVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIE 90 (343)
T ss_pred hhhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhccccccc
Confidence 45678999999999999999999999999999999999765444445567889999999999999999999986432 23
Q ss_pred CCccEEEEEecCCcCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCcccccc
Q 007541 98 EFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAF 177 (599)
Q Consensus 98 ~~~~iylV~E~~~g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~ 177 (599)
....+|+|+++++++|.+++.. ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++...
T Consensus 91 ~~~~~~~~~~~~~~~l~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~ 169 (343)
T cd07878 91 NFNEVYLVTNLMGADLNNIVKC-QKLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLARQAD 169 (343)
T ss_pred ccCcEEEEeecCCCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEECCCCCEEEcCCccceecC
Confidence 3457899999999999988764 469999999999999999999999999999999999999999999999999998653
Q ss_pred CCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHH
Q 007541 178 NDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIAR 257 (599)
Q Consensus 178 ~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~ 257 (599)
.. .+.+++|++|+|||++.+. ..++.++|||||||++|+|++|+.||.+.+..+.+..+....|.+.++.+..
T Consensus 170 ~~------~~~~~~t~~y~aPE~~~~~-~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (343)
T cd07878 170 DE------MTGYVATRWYRAPEIMLNW-MHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLKK 242 (343)
T ss_pred CC------cCCccccccccCchHhcCC-ccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHh
Confidence 22 2456899999999998652 4688999999999999999999999999999999999999999998876655
Q ss_pred HhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHH
Q 007541 258 VCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLER 337 (599)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~ 337 (599)
+.....+.++..+.......+...+...++.+.+||.+
T Consensus 243 ------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 280 (343)
T cd07878 243 ------------------------------------------ISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEK 280 (343)
T ss_pred ------------------------------------------cchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHH
Confidence 33334445555554444444455556778899999999
Q ss_pred hcccCCCCCCCHHHHhcCccccCcccCCCCCCCCCCCcchhhHhhhcCCHHHHHHHHHHHHHhhC
Q 007541 338 MLAFEPKDRPTAEEALADPYFKGLAKVEREPSAQPVTKMEFEFERRRITKEDVRELIYREILEYH 402 (599)
Q Consensus 338 mL~~DP~~RpTa~e~L~HP~f~~~~~~~~~p~~~~~~~~~~~~e~~~~~~e~~~~~i~~e~~~~~ 402 (599)
||.+||.+|||+.|+|+||||..+..+..++...+. ....+....+.+++++..+.+...+.
T Consensus 281 mL~~dp~~R~s~~ell~hp~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (343)
T cd07878 281 MLVLDSDKRISASEALAHPYFSQYHDPEDEPEAEPY---DESPENKERTIEEWKELTYEEVSSFK 342 (343)
T ss_pred HcCCChhhCCCHHHHhcCcchhccCCCccccccCcc---ccchhhhhccHHHHHHHHHHHHHhcC
Confidence 999999999999999999999988766554433322 22223345566777777777665443
No 21
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=2.4e-49 Score=421.89 Aligned_cols=329 Identities=37% Similarity=0.672 Sum_probs=261.9
Q ss_pred CCCCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCC-cCC
Q 007541 20 GEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPS-RRE 98 (599)
Q Consensus 20 ~~~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s-~~~ 98 (599)
...++|++.+.||+|+||+||+|++..+++.||||++............+.+|+.+++.++||||+++++++.... ...
T Consensus 21 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~ 100 (364)
T cd07875 21 TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEE 100 (364)
T ss_pred chhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccccccc
Confidence 3468999999999999999999999999999999999865555566678889999999999999999999986543 234
Q ss_pred CccEEEEEecCCcCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccC
Q 007541 99 FKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFN 178 (599)
Q Consensus 99 ~~~iylV~E~~~g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~ 178 (599)
...+|+||||++++|.+.+.. .+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++....
T Consensus 101 ~~~~~lv~e~~~~~l~~~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~ 178 (364)
T cd07875 101 FQDVYIVMELMDANLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT 178 (364)
T ss_pred cCeEEEEEeCCCCCHHHHHHh--cCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEECCCCcEEEEeCCCccccCC
Confidence 457899999999999998864 488999999999999999999999999999999999999999999999999976432
Q ss_pred CCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHH
Q 007541 179 DTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARV 258 (599)
Q Consensus 179 ~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~ 258 (599)
.. ..+..++|..|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+..+.+..+...+|.|.++.+..+
T Consensus 179 ~~----~~~~~~~t~~y~aPE~~~~--~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (364)
T cd07875 179 SF----MMTPYVVTRYYRAPEVILG--MGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKL 252 (364)
T ss_pred CC----cccCCcccCCcCCHHHHhC--CCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhh
Confidence 21 2245688999999999977 67999999999999999999999999999999999999999999998776652
Q ss_pred hhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCC------------CCCCCC
Q 007541 259 CLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPF------------SQKFPN 326 (599)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~ 326 (599)
.... ..+....+......+ ......
T Consensus 253 ~~~~-------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (364)
T cd07875 253 QPTV-------------------------------------------RTYVENRPKYAGYSFEKLFPDVLFPADSEHNKL 289 (364)
T ss_pred hHHH-------------------------------------------HHHHhhCCCcCCCChHhhCcccccccccccccc
Confidence 2111 111111111111111 111123
Q ss_pred CCHHHHHHHHHhcccCCCCCCCHHHHhcCccccCcccCCCCCCCCCCCcchhhHhhhcCCHHHHHHHHHHHHHh
Q 007541 327 ANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKVEREPSAQPVTKMEFEFERRRITKEDVRELIYREILE 400 (599)
Q Consensus 327 ~s~~a~dLL~~mL~~DP~~RpTa~e~L~HP~f~~~~~~~~~p~~~~~~~~~~~~e~~~~~~e~~~~~i~~e~~~ 400 (599)
.+..+++||.+||++||.+|||++|+|+||||..+..+...+...+.. .+.+.+.+..+.+++++.++.|+++
T Consensus 290 ~~~~~~dll~~mL~~dP~~R~t~~e~L~hp~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (364)
T cd07875 290 KASQARDLLSKMLVIDASKRISVDEALQHPYINVWYDPSEAEAPPPKI-PDKQLDEREHTIEEWKELIYKEVMD 362 (364)
T ss_pred ccHHHHHHHHHhcCcCcccCCCHHHHhcCcccccccCcccCCCCCCCC-CCccchhhhccHHHHHHHHHHHHHc
Confidence 467899999999999999999999999999999877665443332211 1223444567788899988888754
No 22
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=8.7e-51 Score=412.82 Aligned_cols=260 Identities=29% Similarity=0.502 Sum_probs=227.0
Q ss_pred cCCCCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCccc-ChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcC
Q 007541 19 YGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFE-HVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRR 97 (599)
Q Consensus 19 ~~~~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~-~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~ 97 (599)
.-..+.|+++++||+|+||+||.++.+.|++.+|+|++++..- .....+.+..|..||..++||.||+++..|.+
T Consensus 21 ~~~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt---- 96 (357)
T KOG0598|consen 21 MVGPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQT---- 96 (357)
T ss_pred cCChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEeccc----
Confidence 3457899999999999999999999999999999999986432 33467788999999999999999999999954
Q ss_pred CCccEEEEEecCC-cCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccc
Q 007541 98 EFKDIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVA 176 (599)
Q Consensus 98 ~~~~iylV~E~~~-g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~ 176 (599)
..++|||+||+. |+|+-.|+..+.++|+.++.++..|+.||.|||++|||||||||+|||+|.+|+++|+|||||+..
T Consensus 97 -~~kLylVld~~~GGeLf~hL~~eg~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~ 175 (357)
T KOG0598|consen 97 -EEKLYLVLDYLNGGELFYHLQREGRFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILLDEQGHIKLTDFGLCKED 175 (357)
T ss_pred -CCeEEEEEeccCCccHHHHHHhcCCcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeeecCCCcEEEeccccchhc
Confidence 458999999999 599999999999999999999999999999999999999999999999999999999999999865
Q ss_pred cCCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHH
Q 007541 177 FNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIA 256 (599)
Q Consensus 177 ~~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~ 256 (599)
...... -.+.|||+.|||||++.+ ..|+.++|.||||+++|+||+|.+||.+.+.....+.|...-
T Consensus 176 ~~~~~~---t~tfcGT~eYmAPEil~~--~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I~~~k--------- 241 (357)
T KOG0598|consen 176 LKDGDA---TRTFCGTPEYMAPEILLG--KGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKILKGK--------- 241 (357)
T ss_pred ccCCCc---cccccCCccccChHHHhc--CCCCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHHHhcCc---------
Confidence 443222 134799999999999988 699999999999999999999999999998777666664211
Q ss_pred HHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCC-CCHHHHHHH
Q 007541 257 RVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPN-ANPLALRLL 335 (599)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~s~~a~dLL 335 (599)
. ...+. .+..++|||
T Consensus 242 ---------------------------------------------------------------~-~~~p~~ls~~ardll 257 (357)
T KOG0598|consen 242 ---------------------------------------------------------------L-PLPPGYLSEEARDLL 257 (357)
T ss_pred ---------------------------------------------------------------C-CCCCccCCHHHHHHH
Confidence 0 11233 788999999
Q ss_pred HHhcccCCCCCC----CHHHHhcCccccCc
Q 007541 336 ERMLAFEPKDRP----TAEEALADPYFKGL 361 (599)
Q Consensus 336 ~~mL~~DP~~Rp----Ta~e~L~HP~f~~~ 361 (599)
+++|+.||.+|. .++++-+||||.++
T Consensus 258 ~~LL~rdp~~RLg~~~d~~~ik~HpfF~~i 287 (357)
T KOG0598|consen 258 KKLLKRDPRQRLGGPGDAEEIKRHPFFKGI 287 (357)
T ss_pred HHHhccCHHHhcCCCCChHHhhcCcccccC
Confidence 999999999996 79999999999986
No 23
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=5e-51 Score=429.28 Aligned_cols=261 Identities=30% Similarity=0.526 Sum_probs=227.3
Q ss_pred CCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCccc-ChhhHHHHHHHHHHHHhc-CCCCccccceeecCCCcCCC
Q 007541 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFE-HVSDATRILREIKLLRLL-RHPDIVEIKHILLPPSRREF 99 (599)
Q Consensus 22 ~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~-~~~~~~~i~rEi~iL~~l-~HpnIv~l~~v~~~~s~~~~ 99 (599)
..+|.+++.||.|+|++|++|+++.+++.||||++.+.+. .......+.+|-.+|..| .||.|++|+..|.+.
T Consensus 72 ~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~----- 146 (604)
T KOG0592|consen 72 PNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDE----- 146 (604)
T ss_pred hhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecc-----
Confidence 4678889999999999999999999999999999976443 233445677899999999 699999999999554
Q ss_pred ccEEEEEecCC-cCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccC
Q 007541 100 KDIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFN 178 (599)
Q Consensus 100 ~~iylV~E~~~-g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~ 178 (599)
..+|+|+||++ |+|.++|+..+.+++..+++|..||+.||+|||++|||||||||+|||+|.||++||+|||.|+....
T Consensus 147 ~sLYFvLe~A~nGdll~~i~K~Gsfde~caR~YAAeIldAleylH~~GIIHRDlKPENILLd~dmhikITDFGsAK~l~~ 226 (604)
T KOG0592|consen 147 ESLYFVLEYAPNGDLLDLIKKYGSFDETCARFYAAEILDALEYLHSNGIIHRDLKPENILLDKDGHIKITDFGSAKILSP 226 (604)
T ss_pred cceEEEEEecCCCcHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeEcCCCcEEEeeccccccCCh
Confidence 47999999999 89999999999999999999999999999999999999999999999999999999999999987642
Q ss_pred CCCC--------cc--cccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcC
Q 007541 179 DTPT--------AI--FWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLG 248 (599)
Q Consensus 179 ~~~~--------~~--~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG 248 (599)
.... .. .....|||..|++||+|.. ...++.+|||+||||+|.|+.|.+||.+.+.-..+++|+++.-
T Consensus 227 ~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~--~~~~~~sDiWAlGCilyQmlaG~PPFra~NeyliFqkI~~l~y 304 (604)
T KOG0592|consen 227 SQKSQENPVDPNQASSRRSSFVGTAEYVSPELLND--SPAGPSSDLWALGCILYQMLAGQPPFRAANEYLIFQKIQALDY 304 (604)
T ss_pred hhccccCccCcccccCcccceeeeecccCHHHhcC--CCCCcccchHHHHHHHHHHhcCCCCCccccHHHHHHHHHHhcc
Confidence 2111 11 1145899999999999987 6788999999999999999999999999999888888876432
Q ss_pred CCCHHHHHHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCC
Q 007541 249 TPSPEAIARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNAN 328 (599)
Q Consensus 249 ~p~~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 328 (599)
.. -++++
T Consensus 305 ~f-------------------------------------------------------------------------p~~fp 311 (604)
T KOG0592|consen 305 EF-------------------------------------------------------------------------PEGFP 311 (604)
T ss_pred cC-------------------------------------------------------------------------CCCCC
Confidence 11 13567
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHhcCccccCcc
Q 007541 329 PLALRLLERMLAFEPKDRPTAEEALADPYFKGLA 362 (599)
Q Consensus 329 ~~a~dLL~~mL~~DP~~RpTa~e~L~HP~f~~~~ 362 (599)
+.+.|||+++|..||.+|+|++|+.+||||.++.
T Consensus 312 ~~a~dLv~KLLv~dp~~Rlt~~qIk~HpFF~~Vd 345 (604)
T KOG0592|consen 312 EDARDLIKKLLVRDPSDRLTSQQIKAHPFFEGVD 345 (604)
T ss_pred HHHHHHHHHHHccCccccccHHHHhhCcccccCC
Confidence 8999999999999999999999999999999863
No 24
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=2.1e-49 Score=423.63 Aligned_cols=329 Identities=43% Similarity=0.734 Sum_probs=261.7
Q ss_pred ceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEE
Q 007541 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIY 103 (599)
Q Consensus 24 rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~iy 103 (599)
.|++.+.||+|+||+||+|.+..+|+.||||++...........++.+|+.+|+.++|+||+++++++.......+.++|
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 80 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY 80 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence 47889999999999999999999999999999976555555667889999999999999999999999765444445899
Q ss_pred EEEecCCcCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCCCCCc
Q 007541 104 VVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTA 183 (599)
Q Consensus 104 lV~E~~~g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~~~~ 183 (599)
+||||+.++|.+++.....+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++...... .
T Consensus 81 lv~e~~~~~l~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~~--~ 158 (372)
T cd07853 81 VVTELMQSDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEEPDE--S 158 (372)
T ss_pred EEeeccccCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEECCCCCEEeccccceeecccCc--c
Confidence 99999999999999888889999999999999999999999999999999999999999999999999998653222 1
Q ss_pred ccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHhhhhh
Q 007541 184 IFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVCLLLN 263 (599)
Q Consensus 184 ~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~~~~~ 263 (599)
...+..++|++|+|||++.+. ..|+.++||||+|||+++|++|++||.+.+..+++..|.+.+|.++.+.+...+.
T Consensus 159 ~~~~~~~~~~~y~aPE~~~~~-~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~--- 234 (372)
T cd07853 159 KHMTQEVVTQYYRAPEILMGS-RHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACE--- 234 (372)
T ss_pred ccCCCCCcCCCcCCHHHHcCC-CCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhH---
Confidence 223456789999999988652 4588999999999999999999999999999999999999999999877655221
Q ss_pred hhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCC--CCCCCCCCCCHHHHHHHHHhccc
Q 007541 264 IIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPI--PFSQKFPNANPLALRLLERMLAF 341 (599)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~s~~a~dLL~~mL~~ 341 (599)
..+.++.......+. .........++.+.+||.+||++
T Consensus 235 ----------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~ 274 (372)
T cd07853 235 ----------------------------------------GARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVF 274 (372)
T ss_pred ----------------------------------------HHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCC
Confidence 111222111111110 01122345688999999999999
Q ss_pred CCCCCCCHHHHhcCccccCcccC--------------------CCCCCCCCCCcchhhHhhhcCCHHHHHHHHHHHHHh
Q 007541 342 EPKDRPTAEEALADPYFKGLAKV--------------------EREPSAQPVTKMEFEFERRRITKEDVRELIYREILE 400 (599)
Q Consensus 342 DP~~RpTa~e~L~HP~f~~~~~~--------------------~~~p~~~~~~~~~~~~e~~~~~~e~~~~~i~~e~~~ 400 (599)
||.+|||+.|+|+||||.+.... ..+|.. ...++++++....+..++++.++.++.+
T Consensus 275 dP~~R~t~~e~l~hp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (372)
T cd07853 275 DPDKRISAADALAHPYLDEGRLRYHTCMCKCCYTTSGGRVYTSDFEPSA--NPPFDDEYEKNLTSVRQVKEELHQFILE 351 (372)
T ss_pred ChhhCcCHHHHhcCHhhCCCcchhccccccccccccccccCCcccCCCC--CCCCCcccccccCCHHHHHHHHHHHHHH
Confidence 99999999999999999874210 111111 1233455566666778888888877654
No 25
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=4.7e-49 Score=414.85 Aligned_cols=334 Identities=51% Similarity=0.893 Sum_probs=275.3
Q ss_pred CCCCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCC
Q 007541 20 GEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREF 99 (599)
Q Consensus 20 ~~~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~ 99 (599)
..+++|++.+.||+|+||+||+|.+..+|+.||||+++.. .......++.+|+.+|+.++|+||+++++++........
T Consensus 2 ~~~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 80 (336)
T cd07849 2 DVGPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPF-EHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESF 80 (336)
T ss_pred ccccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEeccc-ccchhHHHHHHHHHHHHhCCCCCcCchhheeeccccccc
Confidence 4678999999999999999999999999999999998642 223345677899999999999999999999876655556
Q ss_pred ccEEEEEecCCcCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCC
Q 007541 100 KDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFND 179 (599)
Q Consensus 100 ~~iylV~E~~~g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~ 179 (599)
.++|+|+||++++|.+++.. ..+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||+++.....
T Consensus 81 ~~~~lv~e~~~~~l~~~~~~-~~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~ 159 (336)
T cd07849 81 NDVYIVQELMETDLYKLIKT-QHLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTNCDLKICDFGLARIADPE 159 (336)
T ss_pred ceEEEEehhcccCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEECcccceeecccc
Confidence 68999999999999988865 46999999999999999999999999999999999999999999999999999865433
Q ss_pred CCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHh
Q 007541 180 TPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVC 259 (599)
Q Consensus 180 ~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~ 259 (599)
..........++|..|+|||.+.+. ..++.++||||+||++++|++|++||.+.+...++..+.+.++.++.+.+..
T Consensus 160 ~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~-- 236 (336)
T cd07849 160 HDHTGFLTEYVATRWYRAPEIMLNS-KGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDLNC-- 236 (336)
T ss_pred ccccCCcCCcCcCCCccChHHhhCC-CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHH--
Confidence 2222233456789999999987542 5688999999999999999999999999999999999999999998887765
Q ss_pred hhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHhc
Q 007541 260 LLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERML 339 (599)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL 339 (599)
+.....+.++.........++....+..++.+.+||.+||
T Consensus 237 ----------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l 276 (336)
T cd07849 237 ----------------------------------------IISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKML 276 (336)
T ss_pred ----------------------------------------hhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHc
Confidence 2233344444545444455555556778899999999999
Q ss_pred ccCCCCCCCHHHHhcCccccCcccCCCCCCCCCCCcchhhHhhhcCCHHHHHHHHHHHHH
Q 007541 340 AFEPKDRPTAEEALADPYFKGLAKVEREPSAQPVTKMEFEFERRRITKEDVRELIYREIL 399 (599)
Q Consensus 340 ~~DP~~RpTa~e~L~HP~f~~~~~~~~~p~~~~~~~~~~~~e~~~~~~e~~~~~i~~e~~ 399 (599)
+.||.+|||+.|+|+||||..+.++..++..++...++++.. +.+.++..++.|+.||.
T Consensus 277 ~~dP~~Rpt~~e~l~hp~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 335 (336)
T cd07849 277 TFNPHKRITVEEALAHPYLEQYHDPSDEPVAEEPFPFDFELF-DDLPKEKLKELIFEEIM 335 (336)
T ss_pred CCChhhCcCHHHHhcCccccccCCCCCcccCCCCCChhhccc-cccCHHHHHHHHHHHhc
Confidence 999999999999999999999988766666654444444433 45568888999988874
No 26
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=8.7e-49 Score=416.75 Aligned_cols=326 Identities=38% Similarity=0.686 Sum_probs=253.7
Q ss_pred CCCCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCc-CC
Q 007541 20 GEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSR-RE 98 (599)
Q Consensus 20 ~~~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~-~~ 98 (599)
...++|++++.||+|+||+||+|.+..+|+.||||++...........++.+|+.+++.++||||+++++++..... ..
T Consensus 18 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 97 (359)
T cd07876 18 TVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEE 97 (359)
T ss_pred hhhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccc
Confidence 34689999999999999999999999999999999998655555566788899999999999999999999865432 34
Q ss_pred CccEEEEEecCCcCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccC
Q 007541 99 FKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFN 178 (599)
Q Consensus 99 ~~~iylV~E~~~g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~ 178 (599)
+..+|+||||++++|.+.+.. .+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++....
T Consensus 98 ~~~~~lv~e~~~~~l~~~~~~--~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~~~ 175 (359)
T cd07876 98 FQDVYLVMELMDANLCQVIHM--ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACT 175 (359)
T ss_pred cceeEEEEeCCCcCHHHHHhc--cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEecCCCcccccc
Confidence 457899999999999888754 489999999999999999999999999999999999999999999999999975432
Q ss_pred CCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHH
Q 007541 179 DTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARV 258 (599)
Q Consensus 179 ~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~ 258 (599)
. ...+...+|+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+..+++..+.+.+|.|..+.+...
T Consensus 176 ~----~~~~~~~~t~~y~aPE~~~~--~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (359)
T cd07876 176 N----FMMTPYVVTRYYRAPEVILG--MGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRL 249 (359)
T ss_pred C----ccCCCCcccCCCCCchhccC--CCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHH
Confidence 1 12245688999999999976 67999999999999999999999999999999999999999999988776552
Q ss_pred hhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCC------------CCCC
Q 007541 259 CLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQ------------KFPN 326 (599)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~ 326 (599)
.... ..+...........+.+ ....
T Consensus 250 ~~~~-------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (359)
T cd07876 250 QPTV-------------------------------------------RNYVENRPQYPGISFEELFPDWIFPSESERDKL 286 (359)
T ss_pred HHHH-------------------------------------------HHHHhhCCCCCCcchhhhccccccccccccccc
Confidence 2111 11111111111111111 1123
Q ss_pred CCHHHHHHHHHhcccCCCCCCCHHHHhcCccccCcccCCCCCCCCCCCcchhhHhhhcCCHHHHHHHHHHH
Q 007541 327 ANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKVEREPSAQPVTKMEFEFERRRITKEDVRELIYRE 397 (599)
Q Consensus 327 ~s~~a~dLL~~mL~~DP~~RpTa~e~L~HP~f~~~~~~~~~p~~~~~~~~~~~~e~~~~~~e~~~~~i~~e 397 (599)
.++.+.+||.+||++||++|||+.|+|+||||..+..+.......+.. ...+.+.+....+.+.+.+...
T Consensus 287 ~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 356 (359)
T cd07876 287 KTSQARDLLSKMLVIDPDKRISVDEALRHPYITVWYDPAEAEAPPPQI-YDAQLEEREHAIEEWKELIYKE 356 (359)
T ss_pred cchhHHHHHHHHhccCcccCCCHHHHhcCchhhhhcCcccccCCCccc-cccccccccccHHHHHHHHHHH
Confidence 467899999999999999999999999999999776554332222211 1112233444455556555544
No 27
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-49 Score=423.81 Aligned_cols=258 Identities=33% Similarity=0.534 Sum_probs=221.3
Q ss_pred CCCCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCccc--C-hhhHHHHHHHHHHHHhcC-CCCccccceeecCCC
Q 007541 20 GEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFE--H-VSDATRILREIKLLRLLR-HPDIVEIKHILLPPS 95 (599)
Q Consensus 20 ~~~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~--~-~~~~~~i~rEi~iL~~l~-HpnIv~l~~v~~~~s 95 (599)
...++|.+.+.||+|+||+|++|.+..+|+.||||++.+... . ......+.||+.+|+.++ ||||+++++++..+.
T Consensus 14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~ 93 (370)
T KOG0583|consen 14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPT 93 (370)
T ss_pred cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCC
Confidence 456799999999999999999999999999999998775311 1 134556779999999999 999999999996553
Q ss_pred cCCCccEEEEEecCCc-CHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCC-CceeeeccCcc
Q 007541 96 RREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANAD-CKLKICDFGLA 173 (599)
Q Consensus 96 ~~~~~~iylV~E~~~g-~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~-~~lKL~DFGlA 173 (599)
++|+||||+.| +|+++|...+++.|..++.+|+||+.||+|||++||+||||||+|||++.+ +.+||+|||++
T Consensus 94 -----~~~ivmEy~~gGdL~~~i~~~g~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld~~~~~~Kl~DFG~s 168 (370)
T KOG0583|consen 94 -----KIYIVMEYCSGGDLFDYIVNKGRLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILLDGNEGNLKLSDFGLS 168 (370)
T ss_pred -----eEEEEEEecCCccHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEecCCCCCEEEeccccc
Confidence 69999999994 999999998999999999999999999999999999999999999999999 99999999999
Q ss_pred ccccCCCCCcccccccccCccccCccccccccCC-CC-cchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCC
Q 007541 174 RVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSK-YT-PAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPS 251 (599)
Q Consensus 174 ~~~~~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~-ys-~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~ 251 (599)
.... .....+.+.|||+.|+|||++.+ .. |+ .++||||+|+|||.|++|+.||...+....+..|...
T Consensus 169 ~~~~---~~~~~l~t~cGsp~Y~aPEvl~~--~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~ki~~~----- 238 (370)
T KOG0583|consen 169 AISP---GEDGLLKTFCGSPAYAAPEVLSG--KGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRKIRKG----- 238 (370)
T ss_pred cccC---CCCCcccCCCCCcccCCHHHhCC--CCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHHHhcC-----
Confidence 8753 12234578899999999999987 34 64 7899999999999999999999987766655554321
Q ss_pred HHHHHHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCC-CHH
Q 007541 252 PEAIARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNA-NPL 330 (599)
Q Consensus 252 ~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-s~~ 330 (599)
...+. ..+ |+.
T Consensus 239 -----------------------------------------------------------------~~~~p---~~~~S~~ 250 (370)
T KOG0583|consen 239 -----------------------------------------------------------------EFKIP---SYLLSPE 250 (370)
T ss_pred -----------------------------------------------------------------CccCC---CCcCCHH
Confidence 11111 123 899
Q ss_pred HHHHHHHhcccCCCCCCCHHHHhcCccccC
Q 007541 331 ALRLLERMLAFEPKDRPTAEEALADPYFKG 360 (599)
Q Consensus 331 a~dLL~~mL~~DP~~RpTa~e~L~HP~f~~ 360 (599)
+++||++||..||.+|+|+.++++||||+.
T Consensus 251 ~~~Li~~mL~~~P~~R~t~~~i~~h~w~~~ 280 (370)
T KOG0583|consen 251 ARSLIEKMLVPDPSTRITLLEILEHPWFQK 280 (370)
T ss_pred HHHHHHHHcCCCcccCCCHHHHhhChhhcc
Confidence 999999999999999999999999999996
No 28
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=2.8e-49 Score=407.48 Aligned_cols=287 Identities=35% Similarity=0.643 Sum_probs=235.0
Q ss_pred cCCCCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCC
Q 007541 19 YGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRRE 98 (599)
Q Consensus 19 ~~~~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~ 98 (599)
|+.-++|+++++||.|+||+||+|++..+++.||+|+++.... ......+.+|+.+|+.++||||+++++++..
T Consensus 1 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~----- 74 (288)
T cd07871 1 FGKLETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHE-EGAPCTAIREVSLLKNLKHANIVTLHDIIHT----- 74 (288)
T ss_pred CCccccceEeeEEecCCCEEEEEEEECCCCCEEEEEEeccccc-CCcchhHHHHHHHHHhCCCCCEeeEEEEEcC-----
Confidence 4677889999999999999999999999999999999874322 2233467799999999999999999999843
Q ss_pred CccEEEEEecCCcCHHHHHHhCC-CCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCcccccc
Q 007541 99 FKDIYVVFELMESDLHQVIKAND-DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAF 177 (599)
Q Consensus 99 ~~~iylV~E~~~g~L~~~i~~~~-~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~ 177 (599)
...+|+||||++++|.+++...+ .+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++...
T Consensus 75 ~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~ 154 (288)
T cd07871 75 ERCLTLVFEYLDSDLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLINEKGELKLADFGLARAKS 154 (288)
T ss_pred CCeEEEEEeCCCcCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEECcCcceeecc
Confidence 34799999999999999987654 57999999999999999999999999999999999999999999999999997643
Q ss_pred CCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHH
Q 007541 178 NDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIAR 257 (599)
Q Consensus 178 ~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~ 257 (599)
.... ......++..|+|||++.+. ..++.++||||+||++|+|++|++||.+.+..+.+..+...+|.|+.+.+..
T Consensus 155 ~~~~---~~~~~~~~~~y~aPE~~~~~-~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (288)
T cd07871 155 VPTK---TYSNEVVTLWYRPPDVLLGS-TEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPG 230 (288)
T ss_pred CCCc---cccCceecccccChHHhcCC-cccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhc
Confidence 2221 12445789999999988652 5689999999999999999999999999999999999999999999887654
Q ss_pred HhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHH
Q 007541 258 VCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLER 337 (599)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~ 337 (599)
+... +....+. .+.....+.....+..++.++|||.+
T Consensus 231 ~~~~-----------------------------------------~~~~~~~--~~~~~~~~~~~~~~~~~~~~~dll~~ 267 (288)
T cd07871 231 ITSN-----------------------------------------EEFRSYL--FPQYRAQPLINHAPRLDTDGIDLLSS 267 (288)
T ss_pred cccc-----------------------------------------hhhhccc--cCccCCCchHHhCCCCCHHHHHHHHH
Confidence 2100 0000000 01111122223345678899999999
Q ss_pred hcccCCCCCCCHHHHhcCccc
Q 007541 338 MLAFEPKDRPTAEEALADPYF 358 (599)
Q Consensus 338 mL~~DP~~RpTa~e~L~HP~f 358 (599)
||++||.+|||++|+|+||||
T Consensus 268 mL~~dp~~R~t~~~~l~hp~f 288 (288)
T cd07871 268 LLLYETKSRISAEAALRHSYF 288 (288)
T ss_pred hcCcCcccCCCHHHHhcCCCC
Confidence 999999999999999999998
No 29
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=3.7e-52 Score=400.06 Aligned_cols=261 Identities=31% Similarity=0.511 Sum_probs=226.5
Q ss_pred CCCCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCC
Q 007541 20 GEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREF 99 (599)
Q Consensus 20 ~~~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~ 99 (599)
-..+.|++.++||+|.|++|+++.+..||+.+|+|+|+-..-...+.+.+.||+.|.+.|+||||++|.+.+ .+.
T Consensus 8 ~f~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti-----~~~ 82 (355)
T KOG0033|consen 8 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSI-----QEE 82 (355)
T ss_pred ccchhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhh-----ccc
Confidence 345789999999999999999999999999999999974433444778899999999999999999999988 344
Q ss_pred ccEEEEEecCCc-CHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCC---CceeeeccCcccc
Q 007541 100 KDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANAD---CKLKICDFGLARV 175 (599)
Q Consensus 100 ~~iylV~E~~~g-~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~---~~lKL~DFGlA~~ 175 (599)
...|||||+|.| +|..-|.+..-++|..+..+++|||++|.|||.+||||||+||+|+|+-+. .-+||||||+|..
T Consensus 83 ~~~ylvFe~m~G~dl~~eIV~R~~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~ 162 (355)
T KOG0033|consen 83 SFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIE 162 (355)
T ss_pred ceeEEEEecccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeeeccCCCceeecccceEEE
Confidence 579999999995 888888777778999999999999999999999999999999999998653 4599999999987
Q ss_pred ccCCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHH
Q 007541 176 AFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAI 255 (599)
Q Consensus 176 ~~~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i 255 (599)
.. ....+.+.+||+.|+|||++.. ..|+..+|||++|+|||.||.|++||-|.+....++.|+..-
T Consensus 163 l~----~g~~~~G~~GtP~fmaPEvvrk--dpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~-------- 228 (355)
T KOG0033|consen 163 VN----DGEAWHGFAGTPGYLSPEVLKK--DPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGA-------- 228 (355)
T ss_pred eC----CccccccccCCCcccCHHHhhc--CCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhccc--------
Confidence 64 3345678899999999999987 799999999999999999999999999988777777665311
Q ss_pred HHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCC-CCCCCCCCHHHHHH
Q 007541 256 ARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPF-SQKFPNANPLALRL 334 (599)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~a~dL 334 (599)
..+ ...|++++++|++|
T Consensus 229 --------------------------------------------------------------yd~~~~~w~~is~~Ak~L 246 (355)
T KOG0033|consen 229 --------------------------------------------------------------YDYPSPEWDTVTPEAKSL 246 (355)
T ss_pred --------------------------------------------------------------cCCCCcccCcCCHHHHHH
Confidence 111 22567899999999
Q ss_pred HHHhcccCCCCCCCHHHHhcCccccCc
Q 007541 335 LERMLAFEPKDRPTAEEALADPYFKGL 361 (599)
Q Consensus 335 L~~mL~~DP~~RpTa~e~L~HP~f~~~ 361 (599)
+++||..||.+|+|+.|+|+|||+.+-
T Consensus 247 vrrML~~dP~kRIta~EAL~HpWi~~r 273 (355)
T KOG0033|consen 247 IRRMLTVNPKKRITADEALKHPWICNR 273 (355)
T ss_pred HHHHhccChhhhccHHHHhCCchhcch
Confidence 999999999999999999999999864
No 30
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-49 Score=407.54 Aligned_cols=261 Identities=31% Similarity=0.466 Sum_probs=222.8
Q ss_pred CCCCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCC
Q 007541 20 GEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREF 99 (599)
Q Consensus 20 ~~~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~ 99 (599)
...++|.+.+.||+|+||+||+|+++.++..||||.|.+........+.+..||.+|+.++|||||+|++++..+
T Consensus 7 ~~~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~----- 81 (429)
T KOG0595|consen 7 RVVGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDD----- 81 (429)
T ss_pred cccccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecC-----
Confidence 346789999999999999999999999999999999987555566677788999999999999999999999544
Q ss_pred ccEEEEEecCC-cCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCC------CceeeeccCc
Q 007541 100 KDIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANAD------CKLKICDFGL 172 (599)
Q Consensus 100 ~~iylV~E~~~-g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~------~~lKL~DFGl 172 (599)
+.+|||||||+ |||.++|+..+.++|..++.|+.||+.||++||+++||||||||+|||++.+ -.+||+|||+
T Consensus 82 ~~i~lVMEyC~gGDLs~yi~~~~~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGf 161 (429)
T KOG0595|consen 82 DFIYLVMEYCNGGDLSDYIRRRGRLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGF 161 (429)
T ss_pred CeEEEEEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCCCceEEecccch
Confidence 48999999999 7999999999999999999999999999999999999999999999999875 4599999999
Q ss_pred cccccCCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCH
Q 007541 173 ARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSP 252 (599)
Q Consensus 173 A~~~~~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~ 252 (599)
||...+.. ...+.||++.|||||++.. .+|+-++|+||+|+|+|+|++|++||...+..+.+..|.+.-...
T Consensus 162 AR~L~~~~----~a~tlcGSplYMAPEV~~~--~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~~~~k~~~~~-- 233 (429)
T KOG0595|consen 162 ARFLQPGS----MAETLCGSPLYMAPEVIMS--QQYDAKADLWSIGTILYQCLTGKPPFDAETPKELLLYIKKGNEIV-- 233 (429)
T ss_pred hhhCCchh----HHHHhhCCccccCHHHHHh--ccccchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhcccccc--
Confidence 99875332 3456799999999999976 799999999999999999999999999887766554332211000
Q ss_pred HHHHHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHH
Q 007541 253 EAIARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLAL 332 (599)
Q Consensus 253 e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~ 332 (599)
.......+....
T Consensus 234 --------------------------------------------------------------------~~~~~~~s~~~~ 245 (429)
T KOG0595|consen 234 --------------------------------------------------------------------PVLPAELSNPLR 245 (429)
T ss_pred --------------------------------------------------------------------CchhhhccCchh
Confidence 000012344567
Q ss_pred HHHHHhcccCCCCCCCHHHHhcCccccCc
Q 007541 333 RLLERMLAFEPKDRPTAEEALADPYFKGL 361 (599)
Q Consensus 333 dLL~~mL~~DP~~RpTa~e~L~HP~f~~~ 361 (599)
+|+..+|+.||..|.+..+-+.|+++..-
T Consensus 246 ~Ll~~ll~~~~~~~~~~~~~~~~~~l~~~ 274 (429)
T KOG0595|consen 246 ELLISLLQRNPKDRISFEDFFDHPFLAAN 274 (429)
T ss_pred hhhhHHHhcCccccCchHHhhhhhhcccC
Confidence 99999999999999999999999998754
No 31
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=3.5e-48 Score=411.27 Aligned_cols=327 Identities=38% Similarity=0.678 Sum_probs=253.6
Q ss_pred CCCCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCc-CC
Q 007541 20 GEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSR-RE 98 (599)
Q Consensus 20 ~~~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~-~~ 98 (599)
...++|++++.||+|+||+||+|.+..+++.||||++...........++.+|+.+|+.++||||+++++++..... ..
T Consensus 14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 93 (355)
T cd07874 14 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEE 93 (355)
T ss_pred hhhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccc
Confidence 34689999999999999999999999999999999998765555666788899999999999999999999865432 34
Q ss_pred CccEEEEEecCCcCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccC
Q 007541 99 FKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFN 178 (599)
Q Consensus 99 ~~~iylV~E~~~g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~ 178 (599)
...+|+||||++++|.+.+.. .+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++....
T Consensus 94 ~~~~~lv~e~~~~~l~~~~~~--~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill~~~~~~kl~Dfg~~~~~~~ 171 (355)
T cd07874 94 FQDVYLVMELMDANLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT 171 (355)
T ss_pred cceeEEEhhhhcccHHHHHhh--cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEECCCCCEEEeeCcccccCCC
Confidence 457899999999999988864 488999999999999999999999999999999999999999999999999976432
Q ss_pred CCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHH
Q 007541 179 DTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARV 258 (599)
Q Consensus 179 ~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~ 258 (599)
.. .....++|+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+..+.+..+.+.+|.+.++.+..+
T Consensus 172 ~~----~~~~~~~t~~y~aPE~~~~--~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (355)
T cd07874 172 SF----MMTPYVVTRYYRAPEVILG--MGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL 245 (355)
T ss_pred cc----ccCCccccCCccCHHHHcC--CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhh
Confidence 21 2245688999999999876 67999999999999999999999999999999999999999999988876552
Q ss_pred hhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCC-----------CCC-CCCCCC
Q 007541 259 CLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKP-----------IPF-SQKFPN 326 (599)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~-~~~~~~ 326 (599)
.... ..++........ .+. ......
T Consensus 246 ~~~~-------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (355)
T cd07874 246 QPTV-------------------------------------------RNYVENRPKYAGLTFPKLFPDSLFPADSEHNKL 282 (355)
T ss_pred cHHH-------------------------------------------HHHHhcCCccccccchhhccccccccccccccc
Confidence 1111 111111111000 000 111123
Q ss_pred CCHHHHHHHHHhcccCCCCCCCHHHHhcCccccCcccCCCCCCCCCCCcchhhHhhhcCCHHHHHHHHHHHH
Q 007541 327 ANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKVEREPSAQPVTKMEFEFERRRITKEDVRELIYREI 398 (599)
Q Consensus 327 ~s~~a~dLL~~mL~~DP~~RpTa~e~L~HP~f~~~~~~~~~p~~~~~~~~~~~~e~~~~~~e~~~~~i~~e~ 398 (599)
.+..+.+||.+||++||.+|||+.|+|+||||..+.++.......+ ......-..+..+.+++.+.++.++
T Consensus 283 ~~~~~~~li~~mL~~dP~~Rps~~ell~hp~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (355)
T cd07874 283 KASQARDLLSKMLVIDPAKRISVDEALQHPYINVWYDPAEVEAPPP-QIYDKQLDEREHTIEEWKELIYKEV 353 (355)
T ss_pred cchHHHHHHHHHhcCCchhcCCHHHHhcCcchhcccChhhccCCCc-cccccchhhhhccHHHHHHHHHHHh
Confidence 4567899999999999999999999999999997765432211111 1111122233445666777766665
No 32
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=5e-48 Score=400.75 Aligned_cols=291 Identities=34% Similarity=0.602 Sum_probs=230.0
Q ss_pred cCCCCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCC
Q 007541 19 YGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRRE 98 (599)
Q Consensus 19 ~~~~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~ 98 (599)
||..++|++.+.||+|+||+||+|.++.+++.||||++..... ......+.+|+.+|+.++||||+++++++..
T Consensus 1 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~----- 74 (303)
T cd07869 1 FGKADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEE-EGTPFTAIREASLLKGLKHANIVLLHDIIHT----- 74 (303)
T ss_pred CCccccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccc-cccchhHHHHHHHHhhCCCCCcCeEEEEEec-----
Confidence 5888999999999999999999999999999999999874322 2233456789999999999999999999853
Q ss_pred CccEEEEEecCCcCHHHHHHhC-CCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCcccccc
Q 007541 99 FKDIYVVFELMESDLHQVIKAN-DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAF 177 (599)
Q Consensus 99 ~~~iylV~E~~~g~L~~~i~~~-~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~ 177 (599)
...+|+||||+.++|.+++..+ +.+++..++.++.||+.||+|||+.||+||||||+|||++.++.+||+|||+++...
T Consensus 75 ~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~ 154 (303)
T cd07869 75 KETLTLVFEYVHTDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISDTGELKLADFGLARAKS 154 (303)
T ss_pred CCeEEEEEECCCcCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECCCCcceecc
Confidence 3479999999999999988764 578999999999999999999999999999999999999999999999999997542
Q ss_pred CCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCC-ChhhHHHHHHHhcCCCCHHHHH
Q 007541 178 NDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGK-NVVHQLDIMTDLLGTPSPEAIA 256 (599)
Q Consensus 178 ~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~-~~~~~l~~I~~~lG~p~~e~i~ 256 (599)
... ......++|+.|+|||++.+. ..++.++||||+||++|+|++|..||.+. +..+++..+...+|.+....+.
T Consensus 155 ~~~---~~~~~~~~~~~y~aPE~~~~~-~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (303)
T cd07869 155 VPS---HTYSNEVVTLWYRPPDVLLGS-TEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWP 230 (303)
T ss_pred CCC---ccCCCCcccCCCCChHHHcCC-CCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhcc
Confidence 211 122446789999999987652 46889999999999999999999999885 4567788888888888776554
Q ss_pred HHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCC--CCCCHHHHHH
Q 007541 257 RVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKF--PNANPLALRL 334 (599)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~s~~a~dL 334 (599)
....... ..+.. +....+..+...+ ...++.+.+|
T Consensus 231 ~~~~~~~------------~~~~~-------------------------------~~~~~~~~~~~~~~~~~~~~~~~dl 267 (303)
T cd07869 231 GVHSLPH------------FKPER-------------------------------FTLYSPKNLRQAWNKLSYVNHAEDL 267 (303)
T ss_pred chhhccc------------ccccc-------------------------------ccccCCccHHHHhhccCCChHHHHH
Confidence 3211000 00000 0000000001111 1245789999
Q ss_pred HHHhcccCCCCCCCHHHHhcCccccCcc
Q 007541 335 LERMLAFEPKDRPTAEEALADPYFKGLA 362 (599)
Q Consensus 335 L~~mL~~DP~~RpTa~e~L~HP~f~~~~ 362 (599)
|.+||++||++|||++|+|+||||+++.
T Consensus 268 i~~mL~~dp~~R~s~~~~l~h~~f~~~~ 295 (303)
T cd07869 268 ASKLLQCFPKNRLSAQAALSHEYFSDLP 295 (303)
T ss_pred HHHHhccCchhccCHHHHhcCcccccCC
Confidence 9999999999999999999999998763
No 33
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=1.2e-49 Score=418.58 Aligned_cols=258 Identities=32% Similarity=0.565 Sum_probs=229.4
Q ss_pred CceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccE
Q 007541 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDI 102 (599)
Q Consensus 23 ~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~i 102 (599)
++|.+.+.||+|+||+||+|+.+.|.+.||||+|.+......+.+.+.+|++|++.|+|||||.+++.| +...++
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esf-----Et~~~~ 76 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESF-----ETSAHL 76 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhh-----cccceE
Confidence 579999999999999999999999999999999998777778888999999999999999999999999 455699
Q ss_pred EEEEecCCcCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCCCCC
Q 007541 103 YVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPT 182 (599)
Q Consensus 103 ylV~E~~~g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~~~ 182 (599)
++|+||+.|+|+.++..++.++|+.++.|.+||+.||.|||+.+|+|||+||.|||+...|.+|+||||+|+.... .
T Consensus 77 ~vVte~a~g~L~~il~~d~~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~---~ 153 (808)
T KOG0597|consen 77 WVVTEYAVGDLFTILEQDGKLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILLEKGGTLKLCDFGLARAMST---N 153 (808)
T ss_pred EEEehhhhhhHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeeecCCCceeechhhhhhhccc---C
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999997643 2
Q ss_pred cccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHhhhh
Q 007541 183 AIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVCLLL 262 (599)
Q Consensus 183 ~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~~~~ 262 (599)
....+..-||+.|||||++.+ ..|+..+|+||||||+|||..|+|||-..+.......|.+-
T Consensus 154 t~vltsikGtPlYmAPElv~e--~pyd~~sDlWslGcilYE~~~G~PPF~a~si~~Lv~~I~~d---------------- 215 (808)
T KOG0597|consen 154 TSVLTSIKGTPLYMAPELVEE--QPYDHTSDLWSLGCILYELYVGQPPFYARSITQLVKSILKD---------------- 215 (808)
T ss_pred ceeeeeccCcccccCHHHHcC--CCccchhhHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhcC----------------
Confidence 345677889999999999987 78999999999999999999999999876655544444321
Q ss_pred hhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHhcccC
Q 007541 263 NIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFE 342 (599)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL~~D 342 (599)
+..+ ...++..+++||+.+|..|
T Consensus 216 ------------------------------------------------------~v~~---p~~~S~~f~nfl~gLL~kd 238 (808)
T KOG0597|consen 216 ------------------------------------------------------PVKP---PSTASSSFVNFLQGLLIKD 238 (808)
T ss_pred ------------------------------------------------------CCCC---cccccHHHHHHHHHHhhcC
Confidence 1111 1257888999999999999
Q ss_pred CCCCCCHHHHhcCccccCccc
Q 007541 343 PKDRPTAEEALADPYFKGLAK 363 (599)
Q Consensus 343 P~~RpTa~e~L~HP~f~~~~~ 363 (599)
|.+|+|..++|.|||+++--.
T Consensus 239 P~~RltW~~Ll~HpF~k~~~~ 259 (808)
T KOG0597|consen 239 PAQRLTWTDLLGHPFWKGKIN 259 (808)
T ss_pred hhhcccHHHHhcChHHhhhhh
Confidence 999999999999999987433
No 34
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=4.4e-48 Score=407.14 Aligned_cols=330 Identities=52% Similarity=0.947 Sum_probs=277.3
Q ss_pred CCCCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCC
Q 007541 20 GEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREF 99 (599)
Q Consensus 20 ~~~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~ 99 (599)
..+++|++.+.||+|++|.||+|.++.+|+.||+|++............+.+|+.+|+.++||||+++++++.... ...
T Consensus 2 ~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~-~~~ 80 (334)
T cd07855 2 DVGSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPG-ADF 80 (334)
T ss_pred chhhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccC-CCC
Confidence 3468999999999999999999999999999999999865544455677889999999999999999999886543 345
Q ss_pred ccEEEEEecCCcCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCC
Q 007541 100 KDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFND 179 (599)
Q Consensus 100 ~~iylV~E~~~g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~ 179 (599)
..+|+||||+.++|.+++.....+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 81 ~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~ 160 (334)
T cd07855 81 KDVYVVMDLMESDLHHIIHSDQPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVNEDCELRIGDFGMARGLSSS 160 (334)
T ss_pred ceEEEEEehhhhhHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEecccccceeeccc
Confidence 68999999999999999988888999999999999999999999999999999999999999999999999999765332
Q ss_pred CCC-cccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHH
Q 007541 180 TPT-AIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARV 258 (599)
Q Consensus 180 ~~~-~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~ 258 (599)
... ....+..+++.+|+|||.+.+. ..++.++||||+||++++|++|++||.+.+...++..+...+|.|+.+.+..
T Consensus 161 ~~~~~~~~~~~~~~~~y~~PE~~~~~-~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~~- 238 (334)
T cd07855 161 PTEHKYFMTEYVATRWYRAPELLLSL-PEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLNR- 238 (334)
T ss_pred CcCCCcccccccccccccChHHhcCC-cccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhhhh-
Confidence 211 1122345789999999987553 4588999999999999999999999999999999999999999999887655
Q ss_pred hhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHh
Q 007541 259 CLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERM 338 (599)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~m 338 (599)
........++.........++...++..++.+.+||++|
T Consensus 239 -----------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~ 277 (334)
T cd07855 239 -----------------------------------------IGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQM 277 (334)
T ss_pred -----------------------------------------hchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHH
Confidence 333344455555555566666666778899999999999
Q ss_pred cccCCCCCCCHHHHhcCccccCcccCCCCCCCCCCCcchhhHhhhcCCHHHHHHHHH
Q 007541 339 LAFEPKDRPTAEEALADPYFKGLAKVEREPSAQPVTKMEFEFERRRITKEDVRELIY 395 (599)
Q Consensus 339 L~~DP~~RpTa~e~L~HP~f~~~~~~~~~p~~~~~~~~~~~~e~~~~~~e~~~~~i~ 395 (599)
|+.||.+|||++++|+||||.++..++.++.+. ...+++|+....+.|.+.+.|.
T Consensus 278 l~~~P~~Rpt~~~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 332 (334)
T cd07855 278 LQFDPEERITVEQALQHPFLAQYHDPDDEPTCP--PPFDFDFEAIELSREQLKEAIV 332 (334)
T ss_pred ccCChhhCcCHHHHHhChhhhhccCCcccccCC--CCCCCChhhhhcChhhHHHHhh
Confidence 999999999999999999999998887776643 3456777777788888776664
No 35
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00 E-value=5.9e-48 Score=404.47 Aligned_cols=330 Identities=58% Similarity=0.977 Sum_probs=280.2
Q ss_pred ceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEE
Q 007541 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIY 103 (599)
Q Consensus 24 rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~iy 103 (599)
||++.+.||.|++|.||+|.+..+|+.||||++............+.+|+.+++.++|+||+++.+++..........+|
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY 80 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence 69999999999999999999999999999999986554455567888999999999999999999998766444556899
Q ss_pred EEEecCCcCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCCCCCc
Q 007541 104 VVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTA 183 (599)
Q Consensus 104 lV~E~~~g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~~~~ 183 (599)
+||||++++|.+++.....+++..++.++.||+.||+|||+.||+||||||+|||++.++.++|+|||++..........
T Consensus 81 lv~e~~~~~l~~~l~~~~~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~~~~~~~ 160 (330)
T cd07834 81 IVTELMETDLHKVIKSPQPLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVNSNCDLKICDFGLARGVDPDEDEK 160 (330)
T ss_pred EEecchhhhHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccCceEeeccccccc
Confidence 99999999999999888889999999999999999999999999999999999999999999999999998764433211
Q ss_pred ccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHhhhhh
Q 007541 184 IFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVCLLLN 263 (599)
Q Consensus 184 ~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~~~~~ 263 (599)
.......++.+|+|||++.+. ..++.++||||+||++++|++|++||.+.+..+++..+...+|.++++.+..
T Consensus 161 ~~~~~~~~~~~y~aPE~~~~~-~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~------ 233 (330)
T cd07834 161 GFLTEYVVTRWYRAPELLLSS-SRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKF------ 233 (330)
T ss_pred ccccccccccCcCCceeeecc-cCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhhh------
Confidence 223456789999999998762 3789999999999999999999999999999999999999999998876553
Q ss_pred hhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHhcccCC
Q 007541 264 IIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEP 343 (599)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL~~DP 343 (599)
........++.........++....+..++.+.+||.+||++||
T Consensus 234 ------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P 277 (330)
T cd07834 234 ------------------------------------ITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDP 277 (330)
T ss_pred ------------------------------------ccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCCh
Confidence 23334455666666666667777778899999999999999999
Q ss_pred CCCCCHHHHhcCccccCcccCCCCCCCCCCCcchhhHhhhcCCHHHHHHHHHHH
Q 007541 344 KDRPTAEEALADPYFKGLAKVEREPSAQPVTKMEFEFERRRITKEDVRELIYRE 397 (599)
Q Consensus 344 ~~RpTa~e~L~HP~f~~~~~~~~~p~~~~~~~~~~~~e~~~~~~e~~~~~i~~e 397 (599)
.+|||++++|.||||+++..+..++..+...++ ..|+...+++++.+++|+.|
T Consensus 278 ~~Rpt~~~ll~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 330 (330)
T cd07834 278 KKRITADEALAHPYLAQLHDPEDEPVAKPPFDF-DFFDDDELTEEELKELIYEE 330 (330)
T ss_pred hhCCCHHHHHhCccHHhhcccccCCCCCCcccc-cccchhhcCHHHHhHHhhcC
Confidence 999999999999999999887776655544322 14667789999999988764
No 36
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=100.00 E-value=2.3e-47 Score=403.51 Aligned_cols=332 Identities=46% Similarity=0.858 Sum_probs=281.4
Q ss_pred cCCCCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCc-C
Q 007541 19 YGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSR-R 97 (599)
Q Consensus 19 ~~~~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~-~ 97 (599)
+...++|++.+.||+|++|.||+|++..+++.||||++............+.+|+.+++.+.|+||+++++++..... .
T Consensus 11 ~~~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 90 (343)
T cd07851 11 WEVPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLE 90 (343)
T ss_pred ecccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccc
Confidence 456789999999999999999999999999999999987544444455678899999999999999999998865432 3
Q ss_pred CCccEEEEEecCCcCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCcccccc
Q 007541 98 EFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAF 177 (599)
Q Consensus 98 ~~~~iylV~E~~~g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~ 177 (599)
...++|+|+||++++|.+++.. ..+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||++....
T Consensus 91 ~~~~~~lv~e~~~~~L~~~~~~-~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~~~~~~kL~dfg~~~~~~ 169 (343)
T cd07851 91 DFQDVYLVTHLMGADLNNIVKC-QKLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARHTD 169 (343)
T ss_pred ccccEEEEEecCCCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEcccccccccc
Confidence 4457999999999999999876 469999999999999999999999999999999999999999999999999997653
Q ss_pred CCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHH
Q 007541 178 NDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIAR 257 (599)
Q Consensus 178 ~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~ 257 (599)
.. ...+.++.+|+|||++... ..++.++||||+||++++|++|+.||.+.+....+..+.+.++.++++.+.+
T Consensus 170 ~~------~~~~~~~~~y~aPE~~~~~-~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 242 (343)
T cd07851 170 DE------MTGYVATRWYRAPEIMLNW-MHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQK 242 (343)
T ss_pred cc------ccCCcccccccCHHHHhCC-CCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhh
Confidence 22 2455788999999987542 4678999999999999999999999999998899999999999888876655
Q ss_pred HhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHH
Q 007541 258 VCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLER 337 (599)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~ 337 (599)
+.......++..+.......+...+...++.+.+||.+
T Consensus 243 ------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~ 280 (343)
T cd07851 243 ------------------------------------------ISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEK 280 (343)
T ss_pred ------------------------------------------ccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHH
Confidence 33444556666666665556666666789999999999
Q ss_pred hcccCCCCCCCHHHHhcCccccCcccCCCCCCCCCCCcchhhHhhhcCCHHHHHHHHHHHHHhhCh
Q 007541 338 MLAFEPKDRPTAEEALADPYFKGLAKVEREPSAQPVTKMEFEFERRRITKEDVRELIYREILEYHP 403 (599)
Q Consensus 338 mL~~DP~~RpTa~e~L~HP~f~~~~~~~~~p~~~~~~~~~~~~e~~~~~~e~~~~~i~~e~~~~~~ 403 (599)
||..||.+|||+.|+|+||||+.+...+.++..+ ....+|+...+..++++++++.|+.+|.|
T Consensus 281 ~l~~~P~~Rpt~~ell~h~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (343)
T cd07851 281 MLVLDPDKRITAAEALAHPYLAEYHDPEDEPVAP---PYDQSFESRDLTVDEWKELVYKEIMNFKP 343 (343)
T ss_pred hCCCChhhCCCHHHHhcCCCccccCCCccccccc---ccCcchhhhhcCHHHHHHHhHHHHHhccC
Confidence 9999999999999999999999988776665533 23567788899999999999999998865
No 37
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=8.1e-48 Score=395.54 Aligned_cols=284 Identities=35% Similarity=0.611 Sum_probs=231.7
Q ss_pred CceEEEEEEeecCceEEEEEEECC-CCcEEEEEEecCcccChhhHHHHHHHHHHHHhc---CCCCccccceeecCCCcCC
Q 007541 23 SRYKIEEVIGKGSYGVVCSAYDTR-TGEKVAIKKINDIFEHVSDATRILREIKLLRLL---RHPDIVEIKHILLPPSRRE 98 (599)
Q Consensus 23 ~rY~i~~~LG~G~~g~V~~a~d~~-tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l---~HpnIv~l~~v~~~~s~~~ 98 (599)
++|++++.||+|+||+||+|.+.. +|+.||||+++...........+.+|+.+++.+ .||||+++++++.......
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~ 80 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 80 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence 489999999999999999999865 478899999875443333344566788887766 5999999999986543344
Q ss_pred CccEEEEEecCCcCHHHHHHhC--CCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccc
Q 007541 99 FKDIYVVFELMESDLHQVIKAN--DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVA 176 (599)
Q Consensus 99 ~~~iylV~E~~~g~L~~~i~~~--~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~ 176 (599)
...+|+||||+.++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++..
T Consensus 81 ~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 160 (290)
T cd07862 81 ETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIY 160 (290)
T ss_pred CCcEEEEEccCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEcCCCCEEEccccceEec
Confidence 5679999999999999999764 35899999999999999999999999999999999999999999999999999765
Q ss_pred cCCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHH
Q 007541 177 FNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIA 256 (599)
Q Consensus 177 ~~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~ 256 (599)
.... ......+|..|+|||++.. ..++.++||||+||++|+|++|++||.+.+..+.+..|.+..|.+.++.+.
T Consensus 161 ~~~~----~~~~~~~~~~y~aPE~~~~--~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~ 234 (290)
T cd07862 161 SFQM----ALTSVVVTLWYRAPEVLLQ--SSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWP 234 (290)
T ss_pred cCCc----ccccccccccccChHHHhC--CCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhch
Confidence 3321 1234578999999999876 678999999999999999999999999999999999999999988876554
Q ss_pred HHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHH
Q 007541 257 RVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLE 336 (599)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~ 336 (599)
....... ..+......++....+.+++.+.+||.
T Consensus 235 ~~~~~~~----------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~li~ 268 (290)
T cd07862 235 RDVALPR----------------------------------------------QAFHSKSAQPIEKFVTDIDELGKDLLL 268 (290)
T ss_pred hhhcccc----------------------------------------------hhccCCCCCCHHHHccCCCHHHHHHHH
Confidence 3110000 001112233344455678899999999
Q ss_pred HhcccCCCCCCCHHHHhcCccc
Q 007541 337 RMLAFEPKDRPTAEEALADPYF 358 (599)
Q Consensus 337 ~mL~~DP~~RpTa~e~L~HP~f 358 (599)
+||++||++|||+.|+|+||||
T Consensus 269 ~~l~~~P~~R~s~~~~l~hp~f 290 (290)
T cd07862 269 KCLTFNPAKRISAYSALSHPYF 290 (290)
T ss_pred HHhccCchhcCCHHHHhcCCCC
Confidence 9999999999999999999998
No 38
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=8.1e-50 Score=390.78 Aligned_cols=262 Identities=30% Similarity=0.459 Sum_probs=220.7
Q ss_pred ccCCCCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcC
Q 007541 18 EYGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRR 97 (599)
Q Consensus 18 ~~~~~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~ 97 (599)
....-..|+|+++||+|+||.||++.+..+|..||.|+|.....+....+.+..||.+|++|+|||||++++.-+. +
T Consensus 14 ~~~~l~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~---~ 90 (375)
T KOG0591|consen 14 PQKTLADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFI---E 90 (375)
T ss_pred CcccHHHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhh---c
Confidence 3444567999999999999999999999999999999998554555566778899999999999999999884332 2
Q ss_pred CCccEEEEEecCC-cCHHHHHHh----CCCCCHHHHHHHHHHHHhhhhhccc--Cc--eEeecCCCCcEEeCCCCceeee
Q 007541 98 EFKDIYVVFELME-SDLHQVIKA----NDDLTPEHYQFFLYQLLRGLKYIHT--AN--VFHRDLKPKNILANADCKLKIC 168 (599)
Q Consensus 98 ~~~~iylV~E~~~-g~L~~~i~~----~~~lse~~i~~i~~QLl~aL~yLHs--~g--IvHrDLKP~NILv~~~~~lKL~ 168 (599)
+..-++||||||+ |||.+.|+. ...++|..+|.++.||++||.+||+ .+ |+||||||.||+++.+|.+||+
T Consensus 91 ~~evlnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLG 170 (375)
T KOG0591|consen 91 DNEVLNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLG 170 (375)
T ss_pred cchhhHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeec
Confidence 3345999999999 899999964 4579999999999999999999999 55 9999999999999999999999
Q ss_pred ccCccccccCCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcC
Q 007541 169 DFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLG 248 (599)
Q Consensus 169 DFGlA~~~~~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG 248 (599)
||||++...+.. .+-.+++|||+||+||++.. ..|+.++||||+||++|||+.-++||.|++..+...+|..---
T Consensus 171 DfGL~r~l~s~~---tfA~S~VGTPyYMSPE~i~~--~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L~~KI~qgd~ 245 (375)
T KOG0591|consen 171 DFGLGRFLSSKT---TFAHSLVGTPYYMSPERIHE--SGYNFKSDIWSLGCLLYEMCALQSPFYGDNLLSLCKKIEQGDY 245 (375)
T ss_pred cchhHhHhcchh---HHHHhhcCCCcccCHHHHhc--CCCCcchhHHHHHHHHHHHHhcCCCcccccHHHHHHHHHcCCC
Confidence 999999875433 34468999999999999988 7999999999999999999999999999987777776654221
Q ss_pred CCCHHHHHHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCC
Q 007541 249 TPSPEAIARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNAN 328 (599)
Q Consensus 249 ~p~~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 328 (599)
.|-+. ...|
T Consensus 246 ~~~p~-----------------------------------------------------------------------~~YS 254 (375)
T KOG0591|consen 246 PPLPD-----------------------------------------------------------------------EHYS 254 (375)
T ss_pred CCCcH-----------------------------------------------------------------------HHhh
Confidence 11110 1356
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHhcCccccCccc
Q 007541 329 PLALRLLERMLAFEPKDRPTAEEALADPYFKGLAK 363 (599)
Q Consensus 329 ~~a~dLL~~mL~~DP~~RpTa~e~L~HP~f~~~~~ 363 (599)
..+..||..|+..||..||+. +|++..+..
T Consensus 255 ~~l~~li~~ci~vd~~~RP~t-----~~~v~di~~ 284 (375)
T KOG0591|consen 255 TDLRELINMCIAVDPEQRPDT-----VPYVQDIQS 284 (375)
T ss_pred hHHHHHHHHHccCCcccCCCc-----chHHHHHHH
Confidence 778999999999999999997 777776543
No 39
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=3.6e-47 Score=415.80 Aligned_cols=288 Identities=35% Similarity=0.611 Sum_probs=230.7
Q ss_pred CCCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCc---C
Q 007541 21 EGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSR---R 97 (599)
Q Consensus 21 ~~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~---~ 97 (599)
...+|+++++||+|+||+||+|.+..+++.||||++... .....+|+.+|+.++||||+++++++..... .
T Consensus 64 ~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~------~~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~ 137 (440)
T PTZ00036 64 PNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQD------PQYKNRELLIMKNLNHINIIFLKDYYYTECFKKNE 137 (440)
T ss_pred cCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecC------cchHHHHHHHHHhcCCCCCcceeeeEeecccccCC
Confidence 457899999999999999999999999999999988532 1223479999999999999999998865422 2
Q ss_pred CCccEEEEEecCCcCHHHHHHh----CCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCC-ceeeeccCc
Q 007541 98 EFKDIYVVFELMESDLHQVIKA----NDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADC-KLKICDFGL 172 (599)
Q Consensus 98 ~~~~iylV~E~~~g~L~~~i~~----~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~-~lKL~DFGl 172 (599)
....+|+||||++++|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||+
T Consensus 138 ~~~~l~lvmE~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~~~~~~vkL~DFGl 217 (440)
T PTZ00036 138 KNIFLNVVMEFIPQTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDPNTHTLKLCDFGS 217 (440)
T ss_pred CceEEEEEEecCCccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEcCCCCceeeecccc
Confidence 2235789999999998887753 45799999999999999999999999999999999999999765 699999999
Q ss_pred cccccCCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCH
Q 007541 173 ARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSP 252 (599)
Q Consensus 173 A~~~~~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~ 252 (599)
|+....... ...+++|++|+|||++.+. ..|+.++||||||||+|+|++|.+||.+.+..+++..|...+|.|..
T Consensus 218 a~~~~~~~~----~~~~~~t~~y~aPE~~~~~-~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~ 292 (440)
T PTZ00036 218 AKNLLAGQR----SVSYICSRFYRAPELMLGA-TNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTE 292 (440)
T ss_pred chhccCCCC----cccCCCCcCccCHHHhcCC-CCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCH
Confidence 986543221 2356889999999987652 57899999999999999999999999999999999999999999998
Q ss_pred HHHHHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCC-CCCHHH
Q 007541 253 EAIARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFP-NANPLA 331 (599)
Q Consensus 253 e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~s~~a 331 (599)
+.+..+.. .|.... +....+..+...++ ..++++
T Consensus 293 ~~~~~~~~----~~~~~~-----------------------------------------~~~~~~~~l~~~~p~~~~~~~ 327 (440)
T PTZ00036 293 DQLKEMNP----NYADIK-----------------------------------------FPDVKPKDLKKVFPKGTPDDA 327 (440)
T ss_pred HHHHHhch----hhhccc-----------------------------------------CCccCchhHHHHhccCCCHHH
Confidence 77654110 000000 00001111111222 467899
Q ss_pred HHHHHHhcccCCCCCCCHHHHhcCccccCcccC
Q 007541 332 LRLLERMLAFEPKDRPTAEEALADPYFKGLAKV 364 (599)
Q Consensus 332 ~dLL~~mL~~DP~~RpTa~e~L~HP~f~~~~~~ 364 (599)
++||.+||++||.+|+|+.|+|+||||..+...
T Consensus 328 ~~li~~~L~~dP~~R~ta~e~l~hp~f~~~~~~ 360 (440)
T PTZ00036 328 INFISQFLKYEPLKRLNPIEALADPFFDDLRDP 360 (440)
T ss_pred HHHHHHHCCCChhHCcCHHHHhCChhHHhhhcc
Confidence 999999999999999999999999999987553
No 40
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=1.8e-47 Score=392.42 Aligned_cols=286 Identities=34% Similarity=0.636 Sum_probs=228.1
Q ss_pred CceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccE
Q 007541 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDI 102 (599)
Q Consensus 23 ~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~i 102 (599)
++|++.+.||+|+||+||+|+++.+++.||||++............+.+|+.+++.++|+||+++++++. +...+
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~~~~ 75 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFR-----RRGKL 75 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEe-----cCCEE
Confidence 4799999999999999999999999999999999754444444567889999999999999999999984 33579
Q ss_pred EEEEecCCcCHHHHHHh-CCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCCCC
Q 007541 103 YVVFELMESDLHQVIKA-NDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTP 181 (599)
Q Consensus 103 ylV~E~~~g~L~~~i~~-~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~~ 181 (599)
|+||||+++++.+.+.. ...+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||+++.......
T Consensus 76 ~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~ 155 (287)
T cd07848 76 YLVFEYVEKNMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSN 155 (287)
T ss_pred EEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccCccccccccc
Confidence 99999999776665544 45799999999999999999999999999999999999999999999999999986532221
Q ss_pred CcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHhhh
Q 007541 182 TAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVCLL 261 (599)
Q Consensus 182 ~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~~~ 261 (599)
.......+|+.|+|||++.+ ..++.++||||+||++|+|++|++||++.+..+.+..+....|..+.+.+.....
T Consensus 156 --~~~~~~~~~~~y~aPE~~~~--~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 230 (287)
T cd07848 156 --ANYTEYVATRWYRSPELLLG--APYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYS- 230 (287)
T ss_pred --ccccccccccccCCcHHHcC--CCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhc-
Confidence 11234678999999999876 5789999999999999999999999999998888888988888888766543110
Q ss_pred hhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHhccc
Q 007541 262 LNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAF 341 (599)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL~~ 341 (599)
...+.... .. ................++.+.+||++||++
T Consensus 231 -~~~~~~~~--~~-------------------------------------~~~~~~~~~~~~~~~~s~~~~dll~~~L~~ 270 (287)
T cd07848 231 -NPRFHGLR--FP-------------------------------------AVNHPQSLERRYLGILSGVLLDLMKNLLKL 270 (287)
T ss_pred -cchhcccc--cC-------------------------------------cccCcccHHHhhhcccCHHHHHHHHHHccC
Confidence 00000000 00 000000000111234678899999999999
Q ss_pred CCCCCCCHHHHhcCccc
Q 007541 342 EPKDRPTAEEALADPYF 358 (599)
Q Consensus 342 DP~~RpTa~e~L~HP~f 358 (599)
||++|||++|+|+||||
T Consensus 271 ~P~~R~s~~~~l~hp~f 287 (287)
T cd07848 271 NPTDRYLTEQCLNHPAF 287 (287)
T ss_pred CcccCCCHHHHhcCCCC
Confidence 99999999999999998
No 41
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=7.3e-47 Score=401.07 Aligned_cols=326 Identities=39% Similarity=0.697 Sum_probs=260.0
Q ss_pred CCCCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCc-CC
Q 007541 20 GEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSR-RE 98 (599)
Q Consensus 20 ~~~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~-~~ 98 (599)
...++|++++.||+|+||+||+|.+..+|+.||||++............+.+|+.+++.++|+||+++++++..... .+
T Consensus 13 ~~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 92 (353)
T cd07850 13 TVLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEE 92 (353)
T ss_pred hhhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccc
Confidence 45789999999999999999999999999999999987655555556678899999999999999999999865432 34
Q ss_pred CccEEEEEecCCcCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccC
Q 007541 99 FKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFN 178 (599)
Q Consensus 99 ~~~iylV~E~~~g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~ 178 (599)
..++|+||||+.++|.+.+... +++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++....
T Consensus 93 ~~~~~lv~e~~~~~l~~~~~~~--l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~ 170 (353)
T cd07850 93 FQDVYLVMELMDANLCQVIQMD--LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT 170 (353)
T ss_pred cCcEEEEEeccCCCHHHHHhhc--CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCccceeCCC
Confidence 4578999999999999988754 89999999999999999999999999999999999999999999999999986533
Q ss_pred CCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHH
Q 007541 179 DTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARV 258 (599)
Q Consensus 179 ~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~ 258 (599)
.. ......++..|+|||.+.+ ..++.++|||||||++++|++|+.||.+.+...++..+.+.+|.|+.+.+..+
T Consensus 171 ~~----~~~~~~~~~~y~aPE~~~~--~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (353)
T cd07850 171 SF----MMTPYVVTRYYRAPEVILG--MGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRL 244 (353)
T ss_pred CC----CCCCCcccccccCHHHHhC--CCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHh
Confidence 21 1234568899999999876 67899999999999999999999999999999999999999999988766552
Q ss_pred hhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCC-------------CC
Q 007541 259 CLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQK-------------FP 325 (599)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~ 325 (599)
..... .+..........++.+. ..
T Consensus 245 ~~~~~-------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (353)
T cd07850 245 QPTVR-------------------------------------------NYVENRPKYAGYSFEELFPDVLFPPDSESHNK 281 (353)
T ss_pred hhhhh-------------------------------------------HHhhcCCCCCCcchhhhCcccccCcccccccc
Confidence 21111 11111111111111111 12
Q ss_pred CCCHHHHHHHHHhcccCCCCCCCHHHHhcCccccCcccCCCCCCCCCCCcchhhHhhhcCCHHHHHHHHHHH
Q 007541 326 NANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKVEREPSAQPVTKMEFEFERRRITKEDVRELIYRE 397 (599)
Q Consensus 326 ~~s~~a~dLL~~mL~~DP~~RpTa~e~L~HP~f~~~~~~~~~p~~~~~~~~~~~~e~~~~~~e~~~~~i~~e 397 (599)
..++.+.+||.+||++||++|||+.|+|+||||+.|....+.....+ ...+.+.+.+..+.++|++.++.|
T Consensus 282 ~~~~~~~~li~~~L~~dP~~R~t~~eiL~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 352 (353)
T cd07850 282 LKASQARDLLSKMLVIDPEKRISVDDALQHPYINVWYDPSEVEAPPP-APYDHSIDEREHTVEEWKELIYKE 352 (353)
T ss_pred cchhHHHHHHHHHcCCChhhCcCHHHHhcChhHhhccCCccCCCCCC-CccccccccccccHHHHHHHHHhh
Confidence 34667899999999999999999999999999998876544333222 223444566778888888888776
No 42
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=9.2e-48 Score=405.06 Aligned_cols=265 Identities=27% Similarity=0.448 Sum_probs=223.7
Q ss_pred CCCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCccc-ChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCC
Q 007541 21 EGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFE-HVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREF 99 (599)
Q Consensus 21 ~~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~-~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~ 99 (599)
..+.|+++.+||+|+||.||+|+.+.||+.+|+|++++... .....+.+..|-.+|....+|+||+|+-.|.+.
T Consensus 139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~----- 213 (550)
T KOG0605|consen 139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDK----- 213 (550)
T ss_pred CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCC-----
Confidence 45889999999999999999999999999999999986433 334567788999999999999999999999544
Q ss_pred ccEEEEEecCC-cCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccC
Q 007541 100 KDIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFN 178 (599)
Q Consensus 100 ~~iylV~E~~~-g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~ 178 (599)
.++||||||++ ||+..+|...+.|+++.+++++.+++.||..||..|+|||||||+|+|||.+|++||+|||||.....
T Consensus 214 ~~LYLiMEylPGGD~mTLL~~~~~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~ 293 (550)
T KOG0605|consen 214 EYLYLIMEYLPGGDMMTLLMRKDTLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDK 293 (550)
T ss_pred CeeEEEEEecCCccHHHHHHhcCcCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheeecCCCCEeeccccccchhhh
Confidence 58999999999 69999999999999999999999999999999999999999999999999999999999999853211
Q ss_pred C-------------------C----C-----Cc----------------ccccccccCccccCccccccccCCCCcchhh
Q 007541 179 D-------------------T----P-----TA----------------IFWTDYVATRWYRAPELCGSFFSKYTPAIDI 214 (599)
Q Consensus 179 ~-------------------~----~-----~~----------------~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DI 214 (599)
. . + .. ..-...+|||.|+|||++.+ .+|+..+|.
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~--kgY~~~cDw 371 (550)
T KOG0605|consen 294 KHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLG--KGYGKECDW 371 (550)
T ss_pred hhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhc--CCCCccccH
Confidence 0 0 0 00 00124689999999999988 789999999
Q ss_pred HhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHH
Q 007541 215 WSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVL 294 (599)
Q Consensus 215 WSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (599)
||||||+||||.|.|||.+.+..+...+|..-- .
T Consensus 372 WSLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr---------~------------------------------------- 405 (550)
T KOG0605|consen 372 WSLGCIMYEMLVGYPPFCSETPQETYRKIVNWR---------E------------------------------------- 405 (550)
T ss_pred HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHh---------h-------------------------------------
Confidence 999999999999999999999888887776310 0
Q ss_pred HHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCC---CHHHHhcCccccCcc
Q 007541 295 ILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRP---TAEEALADPYFKGLA 362 (599)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL~~DP~~Rp---Ta~e~L~HP~f~~~~ 362 (599)
.+... .-...+++|+|||.+||. ||.+|+ .++||-.||||+++.
T Consensus 406 ----------------~l~fP-------~~~~~s~eA~DLI~rll~-d~~~RLG~~G~~EIK~HPfF~~v~ 452 (550)
T KOG0605|consen 406 ----------------TLKFP-------EEVDLSDEAKDLITRLLC-DPENRLGSKGAEEIKKHPFFKGVD 452 (550)
T ss_pred ----------------hccCC-------CcCcccHHHHHHHHHHhc-CHHHhcCcccHHHHhcCCccccCC
Confidence 00000 012356899999999999 999997 499999999999873
No 43
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=3.5e-47 Score=390.07 Aligned_cols=283 Identities=35% Similarity=0.598 Sum_probs=230.1
Q ss_pred ceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhc---CCCCccccceeecCCCcCCCc
Q 007541 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLL---RHPDIVEIKHILLPPSRREFK 100 (599)
Q Consensus 24 rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l---~HpnIv~l~~v~~~~s~~~~~ 100 (599)
+|++++.||+|+||+||+|+++.+|+.||||.++...........+.+|+.+++.+ +||||+++++++.........
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~ 80 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET 80 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence 69999999999999999999999999999999875433333334456777777665 699999999998765444556
Q ss_pred cEEEEEecCCcCHHHHHHhC--CCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccC
Q 007541 101 DIYVVFELMESDLHQVIKAN--DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFN 178 (599)
Q Consensus 101 ~iylV~E~~~g~L~~~i~~~--~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~ 178 (599)
.+++||||+.++|.+++... ..+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||+++....
T Consensus 81 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~kl~dfg~~~~~~~ 160 (288)
T cd07863 81 KVTLVFEHVDQDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGQVKLADFGLARIYSC 160 (288)
T ss_pred eEEEEEcccccCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccCccccccC
Confidence 79999999999999998764 3589999999999999999999999999999999999999999999999999986532
Q ss_pred CCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHH
Q 007541 179 DTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARV 258 (599)
Q Consensus 179 ~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~ 258 (599)
.. ..+...+|..|+|||++.+ ..++.++||||+||++|+|++|+++|.+.+..+.+.++...+|.+....+...
T Consensus 161 ~~----~~~~~~~~~~y~aPE~~~~--~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (288)
T cd07863 161 QM----ALTPVVVTLWYRAPEVLLQ--STYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRD 234 (288)
T ss_pred cc----cCCCccccccccCchHhhC--CCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCccc
Confidence 21 1234578999999999876 67899999999999999999999999999988899999988888766543320
Q ss_pred hhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHh
Q 007541 259 CLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERM 338 (599)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~m 338 (599)
.... ........+..+....+..+..+.+||.+|
T Consensus 235 ~~~~----------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~li~~~ 268 (288)
T cd07863 235 VTLP----------------------------------------------RGAFSPRGPRPVQSVVPEIEESGAQLLLEM 268 (288)
T ss_pred cccc----------------------------------------------ccccCCCCCCchHHhCcCcCHHHHHHHHHH
Confidence 0000 000111222334445567888999999999
Q ss_pred cccCCCCCCCHHHHhcCccc
Q 007541 339 LAFEPKDRPTAEEALADPYF 358 (599)
Q Consensus 339 L~~DP~~RpTa~e~L~HP~f 358 (599)
|++||.+|||+.|+|.||||
T Consensus 269 L~~dP~~R~t~~~~l~hp~f 288 (288)
T cd07863 269 LTFNPHKRISAFRALQHPFF 288 (288)
T ss_pred hccCcccCCCHHHHhcCCCC
Confidence 99999999999999999998
No 44
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=7.8e-47 Score=392.91 Aligned_cols=291 Identities=36% Similarity=0.657 Sum_probs=238.2
Q ss_pred cCCCCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCC
Q 007541 19 YGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRRE 98 (599)
Q Consensus 19 ~~~~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~ 98 (599)
|+..++|.+++.||+|+||.||+|+++.+++.||||+++.... ......+.+|+.+++.++|+||+++++++..
T Consensus 2 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~----- 75 (309)
T cd07872 2 FGKMETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHE-EGAPCTAIREVSLLKDLKHANIVTLHDIVHT----- 75 (309)
T ss_pred CCCCCceEEEEEecccCCEEEEEEEecCCCCeEEEEEeecccc-CCcchhHHHHHHHHHhCCCCCcceEEEEEee-----
Confidence 5677899999999999999999999999999999999874322 2233456789999999999999999999843
Q ss_pred CccEEEEEecCCcCHHHHHHhC-CCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCcccccc
Q 007541 99 FKDIYVVFELMESDLHQVIKAN-DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAF 177 (599)
Q Consensus 99 ~~~iylV~E~~~g~L~~~i~~~-~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~ 177 (599)
...+|+||||++++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++...
T Consensus 76 ~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~ 155 (309)
T cd07872 76 DKSLTLVFEYLDKDLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKS 155 (309)
T ss_pred CCeEEEEEeCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECccccceecC
Confidence 3479999999999999988765 358999999999999999999999999999999999999999999999999997643
Q ss_pred CCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHH
Q 007541 178 NDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIAR 257 (599)
Q Consensus 178 ~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~ 257 (599)
.... ......+|..|+|||++.+. ..++.++||||+||++++|++|++||.+.+..+.+..+...+|.+..+.+..
T Consensus 156 ~~~~---~~~~~~~~~~y~aPE~~~~~-~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (309)
T cd07872 156 VPTK---TYSNEVVTLWYRPPDVLLGS-SEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPG 231 (309)
T ss_pred CCcc---ccccccccccccCCHHHhCC-CCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhh
Confidence 2211 12345678999999987652 5688999999999999999999999999999999999999999998876654
Q ss_pred HhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHH
Q 007541 258 VCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLER 337 (599)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~ 337 (599)
+. ....... .......+..+....+..++.+++||.+
T Consensus 232 ~~------------------------------------------~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~ 268 (309)
T cd07872 232 IS------------------------------------------SNDEFKN-YNFPKYKPQPLINHAPRLDTEGIELLTK 268 (309)
T ss_pred hc------------------------------------------chhhhhh-hhcCccCCCchhhhccCCCHHHHHHHHH
Confidence 11 0000000 0111222233334456788999999999
Q ss_pred hcccCCCCCCCHHHHhcCccccCcc
Q 007541 338 MLAFEPKDRPTAEEALADPYFKGLA 362 (599)
Q Consensus 338 mL~~DP~~RpTa~e~L~HP~f~~~~ 362 (599)
||++||.+|||++|+|+||||+.+.
T Consensus 269 ~L~~dp~~R~t~~e~l~h~~~~~~~ 293 (309)
T cd07872 269 FLQYESKKRISAEEAMKHAYFRSLG 293 (309)
T ss_pred hccCChhhCCCHHHHhcChhhhhcc
Confidence 9999999999999999999999875
No 45
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=8.7e-48 Score=379.24 Aligned_cols=253 Identities=25% Similarity=0.464 Sum_probs=224.1
Q ss_pred CceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCc-ccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCcc
Q 007541 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDI-FEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKD 101 (599)
Q Consensus 23 ~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~-~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~ 101 (599)
++|++++.||.|+||.|.+++++.+|..+|+|++++. .-.....+...+|..+|+.+.||.+++|...+. +.+.
T Consensus 44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~-----d~~~ 118 (355)
T KOG0616|consen 44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFK-----DNSN 118 (355)
T ss_pred hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeec-----cCCe
Confidence 6789999999999999999999999999999999752 223445677889999999999999999999884 4468
Q ss_pred EEEEEecCC-cCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCCC
Q 007541 102 IYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT 180 (599)
Q Consensus 102 iylV~E~~~-g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~ 180 (599)
+||||||++ |.|+.++++.+++++.++++++.||+.||+|||+++|++|||||+|||+|.+|.+||+|||.|+.....+
T Consensus 119 lymvmeyv~GGElFS~Lrk~~rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~rT 198 (355)
T KOG0616|consen 119 LYMVMEYVPGGELFSYLRKSGRFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLLDQNGHIKITDFGFAKRVSGRT 198 (355)
T ss_pred EEEEEeccCCccHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeeeccCCcEEEEeccceEEecCcE
Confidence 999999999 6999999999999999999999999999999999999999999999999999999999999998865432
Q ss_pred CCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHhh
Q 007541 181 PTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVCL 260 (599)
Q Consensus 181 ~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~~ 260 (599)
-+.|||+.|+|||++.+ ..|+.++|-||||+++|||+.|.+||.+.+....+++|...--
T Consensus 199 ------~TlCGTPeYLAPEii~s--k~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY~KI~~~~v------------ 258 (355)
T KOG0616|consen 199 ------WTLCGTPEYLAPEIIQS--KGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIYEKILEGKV------------ 258 (355)
T ss_pred ------EEecCCccccChHHhhc--CCCCcchhHHHHHHHHHHHHcCCCCCcCCChHHHHHHHHhCcc------------
Confidence 35699999999999988 7999999999999999999999999999998887777753110
Q ss_pred hhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHhcc
Q 007541 261 LLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLA 340 (599)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL~ 340 (599)
. ....++++++|||+++|+
T Consensus 259 ----------------------------------------------------------~---fP~~fs~~~kdLl~~LL~ 277 (355)
T KOG0616|consen 259 ----------------------------------------------------------K---FPSYFSSDAKDLLKKLLQ 277 (355)
T ss_pred ----------------------------------------------------------c---CCcccCHHHHHHHHHHHh
Confidence 0 113478899999999999
Q ss_pred cCCCCCC-----CHHHHhcCccccCc
Q 007541 341 FEPKDRP-----TAEEALADPYFKGL 361 (599)
Q Consensus 341 ~DP~~Rp-----Ta~e~L~HP~f~~~ 361 (599)
.|-.+|. ...++..||||+++
T Consensus 278 vD~t~R~gnlknG~~dIk~H~wF~~v 303 (355)
T KOG0616|consen 278 VDLTKRFGNLKNGVEDIKNHPWFKGV 303 (355)
T ss_pred hhhHhhhcCcCCCccccccCcccccc
Confidence 9999993 57899999999975
No 46
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=6e-48 Score=400.08 Aligned_cols=268 Identities=28% Similarity=0.459 Sum_probs=220.0
Q ss_pred cCCCCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcc------------cChhhHHHHHHHHHHHHhcCCCCccc
Q 007541 19 YGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIF------------EHVSDATRILREIKLLRLLRHPDIVE 86 (599)
Q Consensus 19 ~~~~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~------------~~~~~~~~i~rEi~iL~~l~HpnIv~ 86 (599)
.-.-++|++++.||+|.||+|.+|++..+++.||||++.+.. ......+++.+||.+|++|.|||||+
T Consensus 93 ~k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~ 172 (576)
T KOG0585|consen 93 RKQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVK 172 (576)
T ss_pred ceehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeE
Confidence 344589999999999999999999999999999999996421 11223468999999999999999999
Q ss_pred cceeecCCCcCCCccEEEEEecCC-cCHHHHHHhCCC-CCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCc
Q 007541 87 IKHILLPPSRREFKDIYVVFELME-SDLHQVIKANDD-LTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCK 164 (599)
Q Consensus 87 l~~v~~~~s~~~~~~iylV~E~~~-g~L~~~i~~~~~-lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~ 164 (599)
|+++.-++ ...++|||+|||. |.+... -.... +++.+++.|++.++.||.|||.+|||||||||.|+|++++|.
T Consensus 173 LiEvLDDP---~s~~~YlVley~s~G~v~w~-p~d~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNLLl~~~g~ 248 (576)
T KOG0585|consen 173 LIEVLDDP---ESDKLYLVLEYCSKGEVKWC-PPDKPELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSNLLLSSDGT 248 (576)
T ss_pred EEEeecCc---ccCceEEEEEeccCCccccC-CCCcccccHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEEcCCCc
Confidence 99998554 4568999999999 554433 33334 999999999999999999999999999999999999999999
Q ss_pred eeeeccCccccccCC--CCCcccccccccCccccCccccccc--cCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHH
Q 007541 165 LKICDFGLARVAFND--TPTAIFWTDYVATRWYRAPELCGSF--FSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQL 240 (599)
Q Consensus 165 lKL~DFGlA~~~~~~--~~~~~~~t~~~gt~~Y~APE~l~~~--~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l 240 (599)
+||+|||.+.....+ ......+...+||+.|+|||+|... ....+.+.||||+||+||.|+.|+.||-+....+..
T Consensus 249 VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~~l~ 328 (576)
T KOG0585|consen 249 VKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFELELF 328 (576)
T ss_pred EEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHHHHH
Confidence 999999999765222 1122234557999999999998551 134567899999999999999999999999888888
Q ss_pred HHHHHhcCCCCHHHHHHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCC
Q 007541 241 DIMTDLLGTPSPEAIARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPF 320 (599)
Q Consensus 241 ~~I~~~lG~p~~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (599)
.+|++. +..|
T Consensus 329 ~KIvn~----------------------------------------------------------------------pL~f 338 (576)
T KOG0585|consen 329 DKIVND----------------------------------------------------------------------PLEF 338 (576)
T ss_pred HHHhcC----------------------------------------------------------------------cccC
Confidence 877631 1111
Q ss_pred CCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccccCc
Q 007541 321 SQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGL 361 (599)
Q Consensus 321 ~~~~~~~s~~a~dLL~~mL~~DP~~RpTa~e~L~HP~f~~~ 361 (599)
...+.+.+.++|||.+||+.||.+|+++.++..|||...-
T Consensus 339 -P~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt~~ 378 (576)
T KOG0585|consen 339 -PENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVTRD 378 (576)
T ss_pred -CCcccccHHHHHHHHHHhhcChhheeehhhheecceeccC
Confidence 1224578899999999999999999999999999999764
No 47
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=100.00 E-value=6.5e-46 Score=392.92 Aligned_cols=332 Identities=43% Similarity=0.839 Sum_probs=275.6
Q ss_pred cCCCCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCc-C
Q 007541 19 YGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSR-R 97 (599)
Q Consensus 19 ~~~~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~-~ 97 (599)
+...++|++.+.||+|+||.||+|.+..+|+.||+|++............+.+|+.+++.++|+||+++++++..... .
T Consensus 13 ~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~~~~ 92 (345)
T cd07877 13 WEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLE 92 (345)
T ss_pred hhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeeccccc
Confidence 456799999999999999999999999999999999997644444455678899999999999999999998864321 2
Q ss_pred CCccEEEEEecCCcCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCcccccc
Q 007541 98 EFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAF 177 (599)
Q Consensus 98 ~~~~iylV~E~~~g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~ 177 (599)
....+|+|+++++++|.+++... .+++..++.++.||++||+|||++||+||||||+||+++.++.+||+|||+++...
T Consensus 93 ~~~~~~lv~~~~~~~L~~~~~~~-~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~dfg~~~~~~ 171 (345)
T cd07877 93 EFNDVYLVTHLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD 171 (345)
T ss_pred ccccEEEEehhcccCHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEcCCCCEEEeccccccccc
Confidence 34568999999999998888654 69999999999999999999999999999999999999999999999999997542
Q ss_pred CCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHH
Q 007541 178 NDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIAR 257 (599)
Q Consensus 178 ~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~ 257 (599)
.. ...+.++.+|+|||++.+. ..++.++||||+||++++|++|++||.+.+....+..+....+.+.++.+..
T Consensus 172 ~~------~~~~~~~~~y~aPE~~~~~-~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (345)
T cd07877 172 DE------MTGYVATRWYRAPEIMLNW-MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 244 (345)
T ss_pred cc------ccccccCCCccCHHHHhCc-cCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHhh
Confidence 21 2345789999999987552 4688999999999999999999999999888888889998888888876554
Q ss_pred HhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHH
Q 007541 258 VCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLER 337 (599)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~ 337 (599)
+.....+.++..+.......+...+...++.+.+||.+
T Consensus 245 ------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 282 (345)
T cd07877 245 ------------------------------------------ISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEK 282 (345)
T ss_pred ------------------------------------------cccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHH
Confidence 22333445555555555555555555678999999999
Q ss_pred hcccCCCCCCCHHHHhcCccccCcccCCCCCCCCCCCcchhhHhhhcCCHHHHHHHHHHHHHhhCh
Q 007541 338 MLAFEPKDRPTAEEALADPYFKGLAKVEREPSAQPVTKMEFEFERRRITKEDVRELIYREILEYHP 403 (599)
Q Consensus 338 mL~~DP~~RpTa~e~L~HP~f~~~~~~~~~p~~~~~~~~~~~~e~~~~~~e~~~~~i~~e~~~~~~ 403 (599)
||+.||.+|+|+.++|+||||+++..++.++.... ++..+..+.+..+++....|+|+..|-|
T Consensus 283 ~L~~dp~~R~t~~e~l~h~~f~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (345)
T cd07877 283 MLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADP---YDQSFESRDLLIDEWKSLTYDEVISFVP 345 (345)
T ss_pred HcCCChhhcCCHHHHhcChhhhhcCCCCccccCCC---ccCcchhcccCHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999999988877775543 4566666778889999999999987754
No 48
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.3e-49 Score=383.79 Aligned_cols=303 Identities=33% Similarity=0.551 Sum_probs=243.7
Q ss_pred cCCCCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCC---
Q 007541 19 YGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPS--- 95 (599)
Q Consensus 19 ~~~~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s--- 95 (599)
....+.|+-+.+||+|.||.||+|+.+.+|+.||+|++--..+........+||+.+|..|+|+|++.+++++....
T Consensus 13 ~~~~~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~ 92 (376)
T KOG0669|consen 13 CDEVSKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPT 92 (376)
T ss_pred eecchHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCc
Confidence 45678999999999999999999999999999999987544444445566789999999999999999999986432
Q ss_pred cCCCccEEEEEecCCcCHHHHHHhC-CCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccc
Q 007541 96 RREFKDIYVVFELMESDLHQVIKAN-DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLAR 174 (599)
Q Consensus 96 ~~~~~~iylV~E~~~g~L~~~i~~~-~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~ 174 (599)
......+||||.+|+.||..++... -+++..+++.++.+|+.||.|+|+..|+|||+|+.|+||+.+|.+||+|||+||
T Consensus 93 ~r~r~t~ylVf~~cehDLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLIt~dgilklADFGlar 172 (376)
T KOG0669|consen 93 NRDRATFYLVFDFCEHDLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLITKDGILKLADFGLAR 172 (376)
T ss_pred ccccceeeeeHHHhhhhHHHHhcCccccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEEcCCceEEeecccccc
Confidence 2344579999999999999999765 489999999999999999999999999999999999999999999999999998
Q ss_pred cccCC-CCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHH
Q 007541 175 VAFND-TPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPE 253 (599)
Q Consensus 175 ~~~~~-~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e 253 (599)
..... ......++..+.|.||++||++++. ..|++++|||..|||++||++|.++|.|.+...++..|..++|..+++
T Consensus 173 ~fs~~~n~~kprytnrvvTLwYrppEllLG~-r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tke 251 (376)
T KOG0669|consen 173 AFSTSKNVVKPRYTNRVVTLWYRPPELLLGD-REYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKE 251 (376)
T ss_pred ceecccccCCCCcccceeeeecCCHHHhhcc-cccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCcc
Confidence 75432 2223346888999999999998774 789999999999999999999999999999999999999999999988
Q ss_pred HHHHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHH
Q 007541 254 AIARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALR 333 (599)
Q Consensus 254 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~d 333 (599)
.|.. .+...- ...+... +..... .+.+++..+ ++ .-++.+.|
T Consensus 252 vWP~-----------~d~lpL----------------~~sie~e-Pl~~~~-~rkv~n~~k----p~-----~kd~~a~d 293 (376)
T KOG0669|consen 252 VWPN-----------VDNLPL----------------YQSIELE-PLPKGQ-KRKVKNRLK----PY-----VKDDEALD 293 (376)
T ss_pred cCCC-----------cccchH----------------HHhccCC-CCCcch-hhhhhhhcc----cc-----cCChhHHH
Confidence 7544 222110 0000000 000001 111111111 00 12678999
Q ss_pred HHHHhcccCCCCCCCHHHHhcCccccC
Q 007541 334 LLERMLAFEPKDRPTAEEALADPYFKG 360 (599)
Q Consensus 334 LL~~mL~~DP~~RpTa~e~L~HP~f~~ 360 (599)
||++||.+||.+|+++.++|+|.||..
T Consensus 294 Lle~ll~~DP~kR~~ad~alnh~~F~k 320 (376)
T KOG0669|consen 294 LLEKLLKLDPTKRIDADQALNHDFFWK 320 (376)
T ss_pred HHHHHhccCcccCcchHhhhchhhhhc
Confidence 999999999999999999999999974
No 49
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=100.00 E-value=5.4e-46 Score=393.24 Aligned_cols=332 Identities=43% Similarity=0.786 Sum_probs=274.7
Q ss_pred cCCCCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCc-C
Q 007541 19 YGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSR-R 97 (599)
Q Consensus 19 ~~~~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~-~ 97 (599)
+...++|++++.||+|+||+||+|.+..+|+.||||++............+.+|+.+|+.++|+||+++++++..... .
T Consensus 11 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 90 (343)
T cd07880 11 WEVPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLD 90 (343)
T ss_pred hccccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCcccc
Confidence 557899999999999999999999999999999999987544333345678899999999999999999999865432 2
Q ss_pred CCccEEEEEecCCcCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCcccccc
Q 007541 98 EFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAF 177 (599)
Q Consensus 98 ~~~~iylV~E~~~g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~ 177 (599)
....+|+||||++++|.+++.. ..+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||++....
T Consensus 91 ~~~~~~lv~e~~~~~l~~~~~~-~~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~~~~~~kl~dfg~~~~~~ 169 (343)
T cd07880 91 RFHDFYLVMPFMGTDLGKLMKH-EKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQTD 169 (343)
T ss_pred ccceEEEEEecCCCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccccccc
Confidence 2346799999998899988875 469999999999999999999999999999999999999999999999999997643
Q ss_pred CCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHH
Q 007541 178 NDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIAR 257 (599)
Q Consensus 178 ~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~ 257 (599)
.. .....++++|+|||.+.+. ..++.++|+||+||++++|++|++||.+.+....+..+.+..+.++.+....
T Consensus 170 ~~------~~~~~~~~~y~aPE~~~~~-~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (343)
T cd07880 170 SE------MTGYVVTRWYRAPEVILNW-MHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQK 242 (343)
T ss_pred cC------ccccccCCcccCHHHHhCC-CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHh
Confidence 21 1344678999999988652 4588999999999999999999999999988888888888888877765544
Q ss_pred HhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHH
Q 007541 258 VCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLER 337 (599)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~ 337 (599)
+.......++..++...+..+....++.++.+.+||.+
T Consensus 243 ------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 280 (343)
T cd07880 243 ------------------------------------------LQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEK 280 (343)
T ss_pred ------------------------------------------hcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHH
Confidence 22333445555555554445555567889999999999
Q ss_pred hcccCCCCCCCHHHHhcCccccCcccCCCCCCCCCCCcchhhHhhhcCCHHHHHHHHHHHHHhhCh
Q 007541 338 MLAFEPKDRPTAEEALADPYFKGLAKVEREPSAQPVTKMEFEFERRRITKEDVRELIYREILEYHP 403 (599)
Q Consensus 338 mL~~DP~~RpTa~e~L~HP~f~~~~~~~~~p~~~~~~~~~~~~e~~~~~~e~~~~~i~~e~~~~~~ 403 (599)
||..||.+|||+.++|+||||+.+...+.++...+ +..+++....+-|+++.+.+-||+.|+|
T Consensus 281 ~l~~dP~~R~t~~~~l~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (343)
T cd07880 281 MLVLDAESRITAAEALAHPYFEEFHDPEDETEAPP---YDDSFDEVDQSLEEWKRLTFTEILSFQP 343 (343)
T ss_pred HcCCChhhCCCHHHHhcCccHhhhcCcccccCCCC---ccccHHhhccchHHHHHHHHHHHHhcCC
Confidence 99999999999999999999999877666554443 4455677788899999999999998875
No 50
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=1.2e-46 Score=414.78 Aligned_cols=295 Identities=25% Similarity=0.428 Sum_probs=223.5
Q ss_pred CCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCC------CccccceeecCCC
Q 007541 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHP------DIVEIKHILLPPS 95 (599)
Q Consensus 22 ~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~Hp------nIv~l~~v~~~~s 95 (599)
.++|+++++||+|+||+||+|.+..+++.||||+++... .....+.+|+.+++.++|. ++++++++|...
T Consensus 128 ~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~- 203 (467)
T PTZ00284 128 TQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP---KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNE- 203 (467)
T ss_pred CCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch---hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcC-
Confidence 579999999999999999999999999999999996421 2233455688887777654 478888887432
Q ss_pred cCCCccEEEEEecCCcCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhccc-CceEeecCCCCcEEeCCCC-----------
Q 007541 96 RREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHT-ANVFHRDLKPKNILANADC----------- 163 (599)
Q Consensus 96 ~~~~~~iylV~E~~~g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs-~gIvHrDLKP~NILv~~~~----------- 163 (599)
..++|+|||+++++|.+++...+.+++..++.|+.||+.||.|||+ .|||||||||+|||++.++
T Consensus 204 ---~~~~~iv~~~~g~~l~~~l~~~~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~ 280 (467)
T PTZ00284 204 ---TGHMCIVMPKYGPCLLDWIMKHGPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVTNRAL 280 (467)
T ss_pred ---CceEEEEEeccCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCccccccccccc
Confidence 3479999999999999999888889999999999999999999998 5999999999999998765
Q ss_pred -----ceeeeccCccccccCCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhh
Q 007541 164 -----KLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVH 238 (599)
Q Consensus 164 -----~lKL~DFGlA~~~~~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~ 238 (599)
.+||+|||++..... ..+..+||++|+|||++.+ ..|+.++||||||||+|||++|++||.+.+..+
T Consensus 281 ~~~~~~vkl~DfG~~~~~~~------~~~~~~gt~~Y~APE~~~~--~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~ 352 (467)
T PTZ00284 281 PPDPCRVRICDLGGCCDERH------SRTAIVSTRHYRSPEVVLG--LGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLE 352 (467)
T ss_pred CCCCceEEECCCCccccCcc------ccccccCCccccCcHHhhc--CCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH
Confidence 499999998854211 1245689999999999977 689999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCHHHHHHHhhhh-hhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCC
Q 007541 239 QLDIMTDLLGTPSPEAIARVCLLL-NIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKP 317 (599)
Q Consensus 239 ~l~~I~~~lG~p~~e~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (599)
++..|.+.+|.++.++...+.... ..++....... + .... ..+..+...
T Consensus 353 ~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~----~---------------------~~~~---~~~~~~~~~-- 402 (467)
T PTZ00284 353 HLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLR----P---------------------CTDP---KHLARIARA-- 402 (467)
T ss_pred HHHHHHHHcCCCCHHHHhhccchhHHHHhhhccccc----c---------------------cCCH---HHHHhhhcc--
Confidence 999999999998876543210000 00000000000 0 0000 000000000
Q ss_pred CCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccccCccc
Q 007541 318 IPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAK 363 (599)
Q Consensus 318 ~~~~~~~~~~s~~a~dLL~~mL~~DP~~RpTa~e~L~HP~f~~~~~ 363 (599)
..+... ..++.+.|||.+||++||.+|||++|+|+||||..+..
T Consensus 403 ~~~~~~--~~~~~~~dli~~mL~~dP~~R~ta~e~L~Hp~~~~~~~ 446 (467)
T PTZ00284 403 RPVREV--IRDDLLCDLIYGLLHYDRQKRLNARQMTTHPYVLKYYP 446 (467)
T ss_pred cchhhh--hchHHHHHHHHHhCCcChhhCCCHHHHhcCccccccCC
Confidence 000000 12567899999999999999999999999999998654
No 51
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2e-46 Score=403.93 Aligned_cols=282 Identities=26% Similarity=0.371 Sum_probs=221.7
Q ss_pred CceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccE
Q 007541 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDI 102 (599)
Q Consensus 23 ~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~i 102 (599)
.+|++++.||+|+||.||+|++..+++.||||+.. ...+.+|+.+|+.|+||||++++++|.. ....
T Consensus 92 ~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~--------~~~~~~E~~il~~l~HpnIv~~~~~~~~-----~~~~ 158 (391)
T PHA03212 92 AGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ--------RGGTATEAHILRAINHPSIIQLKGTFTY-----NKFT 158 (391)
T ss_pred CCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh--------hhhhHHHHHHHHhCCCCCCCCEeEEEEE-----CCee
Confidence 68999999999999999999999999999999753 2346789999999999999999999843 3478
Q ss_pred EEEEecCCcCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCCCCC
Q 007541 103 YVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPT 182 (599)
Q Consensus 103 ylV~E~~~g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~~~ 182 (599)
|+|+|++.++|..++.....+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+|+.......
T Consensus 159 ~lv~e~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~- 237 (391)
T PHA03212 159 CLILPRYKTDLYCYLAAKRNIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFINHPGDVCLGDFGAACFPVDINA- 237 (391)
T ss_pred EEEEecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEEcCCCCEEEEeCCcccccccccc-
Confidence 9999999999999998888899999999999999999999999999999999999999999999999999975322111
Q ss_pred cccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCC-------ChhhHHHHHHHhcCCCCHHHH
Q 007541 183 AIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGK-------NVVHQLDIMTDLLGTPSPEAI 255 (599)
Q Consensus 183 ~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~-------~~~~~l~~I~~~lG~p~~e~i 255 (599)
......+||+.|+|||++.+ ..|+.++||||||||+|+|++|+.+|.+. +...++..|...+|.++.+..
T Consensus 238 -~~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~ 314 (391)
T PHA03212 238 -NKYYGWAGTIATNAPELLAR--DPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFP 314 (391)
T ss_pred -cccccccCccCCCChhhhcC--CCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcC
Confidence 12235689999999999976 67999999999999999999999766433 235677888888887665321
Q ss_pred HHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHH-HHHhcccC--CC--CCCCCCCCCCCHH
Q 007541 256 ARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARR-YLSSMRKK--KP--IPFSQKFPNANPL 330 (599)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~--~~~~~~~~~~s~~ 330 (599)
... ...... +....... .+ .+........+..
T Consensus 315 ~~~-------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (391)
T PHA03212 315 IDA-------------------------------------------QANLDEIYIGLAKKSSRKPGSRPLWTNLYELPID 351 (391)
T ss_pred cch-------------------------------------------hHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhh
Confidence 000 000000 00000000 00 0001111235667
Q ss_pred HHHHHHHhcccCCCCCCCHHHHhcCccccCcccC
Q 007541 331 ALRLLERMLAFEPKDRPTAEEALADPYFKGLAKV 364 (599)
Q Consensus 331 a~dLL~~mL~~DP~~RpTa~e~L~HP~f~~~~~~ 364 (599)
+.+||.+||++||.+||||+|+|+||||+.+..+
T Consensus 352 l~~Li~~mL~~dP~~Rpta~elL~hp~f~~~~~~ 385 (391)
T PHA03212 352 LEYLICKMLAFDAHHRPSAEALLDFAAFQDIPDP 385 (391)
T ss_pred HHHHHHHHhcCChhhCCCHHHHhcChhhccCCCC
Confidence 8999999999999999999999999999987544
No 52
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=3.8e-46 Score=388.58 Aligned_cols=286 Identities=33% Similarity=0.563 Sum_probs=217.3
Q ss_pred EEEEeecCceEEEEEEEC--CCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEEEE
Q 007541 28 EEVIGKGSYGVVCSAYDT--RTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVV 105 (599)
Q Consensus 28 ~~~LG~G~~g~V~~a~d~--~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~iylV 105 (599)
.++||+|+||+||+|+++ .+++.||||.+.... ....+.+|+.+|+.++||||+++++++... ....+|+|
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~---~~~~~~lv 78 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG----ISMSACREIALLRELKHPNVISLQKVFLSH---ADRKVWLL 78 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC----CcHHHHHHHHHHHhcCCCCCcceeeeEecC---CCcEEEEE
Confidence 357999999999999976 467899999986421 223467899999999999999999998643 23579999
Q ss_pred EecCCcCHHHHHHhC---------CCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEe----CCCCceeeeccCc
Q 007541 106 FELMESDLHQVIKAN---------DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILA----NADCKLKICDFGL 172 (599)
Q Consensus 106 ~E~~~g~L~~~i~~~---------~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv----~~~~~lKL~DFGl 172 (599)
|||++++|.+++... ..+++..++.++.||+.||.|||+.||+||||||+|||+ +.++.+||+|||+
T Consensus 79 ~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~ 158 (317)
T cd07868 79 FDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGF 158 (317)
T ss_pred EeccCCCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCc
Confidence 999999999988642 258999999999999999999999999999999999999 4568899999999
Q ss_pred cccccCCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCCh---------hhHHHHH
Q 007541 173 ARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNV---------VHQLDIM 243 (599)
Q Consensus 173 A~~~~~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~---------~~~l~~I 243 (599)
|+...............++|++|+|||++.+. ..|+.++||||+||++++|++|++||.+.+. ..++..+
T Consensus 159 a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~-~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~ 237 (317)
T cd07868 159 ARLFNSPLKPLADLDPVVVTFWYRAPELLLGA-RHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRI 237 (317)
T ss_pred eeccCCCCccccccCCccccccccCCHHHcCC-CCcCchhhHHHHHHHHHHHHhCCCCccCCcccccccccccHHHHHHH
Confidence 98754332222223456889999999988652 4689999999999999999999999976542 4678899
Q ss_pred HHhcCCCCHHHHHHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccC--CCCCCC
Q 007541 244 TDLLGTPSPEAIARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKK--KPIPFS 321 (599)
Q Consensus 244 ~~~lG~p~~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 321 (599)
...+|.|....+..+........ ....+....... ....+.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~-------------------------------------~~~~~~~~~~~~~~~~~~~~ 280 (317)
T cd07868 238 FNVMGFPADKDWEDIKKMPEHST-------------------------------------LMKDFRRNTYTNCSLIKYME 280 (317)
T ss_pred HHhcCCCChHHhHHHhhccchhh-------------------------------------hhhhhhccccCcccccchHH
Confidence 99999998887766322111000 000000000000 000011
Q ss_pred CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 007541 322 QKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYF 358 (599)
Q Consensus 322 ~~~~~~s~~a~dLL~~mL~~DP~~RpTa~e~L~HP~f 358 (599)
......+..++|||.+||++||.+|||++|+|+||||
T Consensus 281 ~~~~~~~~~~~dli~~mL~~dP~~R~t~~e~l~hp~f 317 (317)
T cd07868 281 KHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYF 317 (317)
T ss_pred hcCCCCChHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 1112346779999999999999999999999999998
No 53
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=100.00 E-value=2e-45 Score=386.64 Aligned_cols=327 Identities=50% Similarity=0.849 Sum_probs=263.7
Q ss_pred ceEEEEEEeecCceEEEEEEECCC--CcEEEEEEecCcccChhhHHHHHHHHHHHHhcC-CCCccccceeecCCCcCCCc
Q 007541 24 RYKIEEVIGKGSYGVVCSAYDTRT--GEKVAIKKINDIFEHVSDATRILREIKLLRLLR-HPDIVEIKHILLPPSRREFK 100 (599)
Q Consensus 24 rY~i~~~LG~G~~g~V~~a~d~~t--g~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~-HpnIv~l~~v~~~~s~~~~~ 100 (599)
+|++.+.||+|+||.||++.+..+ +..||||++............+.+|+.+++.++ ||||+++++...... ....
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~-~~~~ 79 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFP-GNFN 79 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeecc-ccCC
Confidence 589999999999999999999988 999999998765444444567789999999995 999999998754322 2345
Q ss_pred cEEEEEecCCcCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCCC
Q 007541 101 DIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT 180 (599)
Q Consensus 101 ~iylV~E~~~g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~ 180 (599)
.+|+++||++++|.+++.....+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||+++......
T Consensus 80 ~~~~~~e~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili~~~~~~kl~Dfg~a~~~~~~~ 159 (332)
T cd07857 80 ELYLYEELMEADLHQIIRSGQPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNADCELKICDFGLARGFSENP 159 (332)
T ss_pred cEEEEEecccCCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEEcCCCCEEeCcCCCceeccccc
Confidence 78999999999999999888889999999999999999999999999999999999999999999999999998653222
Q ss_pred CC-cccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHh
Q 007541 181 PT-AIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVC 259 (599)
Q Consensus 181 ~~-~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~ 259 (599)
.. .......++|..|+|||++.+. ..++.++||||+||++++|++|++||.+.+..+.+..+...+|.++.+.+..+
T Consensus 160 ~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~- 237 (332)
T cd07857 160 GENAGFMTEYVATRWYRAPEIMLSF-QSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETLSRI- 237 (332)
T ss_pred ccccccccCcccCccccCcHHHhCC-CCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHHHHhh-
Confidence 11 1122346789999999987542 56889999999999999999999999999999999999999999988766552
Q ss_pred hhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHhc
Q 007541 260 LLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERML 339 (599)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL 339 (599)
.......++..+.......+....+..+..+.+||.+||
T Consensus 238 -----------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l 276 (332)
T cd07857 238 -----------------------------------------GSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLL 276 (332)
T ss_pred -----------------------------------------hhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHc
Confidence 222233344444444455556666778899999999999
Q ss_pred ccCCCCCCCHHHHhcCccccCcccCCCCCCCCCCCcchhhHhhhcCCHHHHHHHHHHH
Q 007541 340 AFEPKDRPTAEEALADPYFKGLAKVEREPSAQPVTKMEFEFERRRITKEDVRELIYRE 397 (599)
Q Consensus 340 ~~DP~~RpTa~e~L~HP~f~~~~~~~~~p~~~~~~~~~~~~e~~~~~~e~~~~~i~~e 397 (599)
++||.+|||+.|+|.||||+.+.++...+.|.......| + ..-+-++++..|.+|
T Consensus 277 ~~~P~~R~t~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~ 331 (332)
T cd07857 277 AFDPTKRISVEEALEHPYLAIWHDPDDEPVCQKPFDFSF--E-SEDSMEELRDMIIEE 331 (332)
T ss_pred cCCcccCCCHHHHhcChhhhhhcCccccccccccccCCc--c-ccccHHHHHHHHhhc
Confidence 999999999999999999999988777776654333333 2 234566777776554
No 54
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00 E-value=2.4e-45 Score=387.91 Aligned_cols=330 Identities=41% Similarity=0.764 Sum_probs=263.1
Q ss_pred cCCCCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCC-cC
Q 007541 19 YGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPS-RR 97 (599)
Q Consensus 19 ~~~~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s-~~ 97 (599)
+...++|.+.+.||+|+||.||+|++..+|+.||||++............+.+|+.+++.++|+||+++++++.... ..
T Consensus 11 ~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 90 (342)
T cd07879 11 WELPERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGD 90 (342)
T ss_pred hccccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCC
Confidence 45568999999999999999999999999999999999764433334456789999999999999999999986542 12
Q ss_pred CCccEEEEEecCCcCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCcccccc
Q 007541 98 EFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAF 177 (599)
Q Consensus 98 ~~~~iylV~E~~~g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~ 177 (599)
....+|+|+||+..+|.+++. ..+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||+++...
T Consensus 91 ~~~~~~lv~e~~~~~l~~~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~~~~~~kL~dfg~~~~~~ 168 (342)
T cd07879 91 EFQDFYLVMPYMQTDLQKIMG--HPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVNEDCELKILDFGLARHAD 168 (342)
T ss_pred CCceEEEEecccccCHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCCCCcCCC
Confidence 345689999999988887653 368999999999999999999999999999999999999999999999999997542
Q ss_pred CCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHH
Q 007541 178 NDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIAR 257 (599)
Q Consensus 178 ~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~ 257 (599)
.. ...+.++.+|+|||.+.+. ..++.++||||+||++++|++|+.||.+.+....+..+....|.+.++.+..
T Consensus 169 ~~------~~~~~~~~~y~aPE~~~~~-~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (342)
T cd07879 169 AE------MTGYVVTRWYRAPEVILNW-MHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQK 241 (342)
T ss_pred CC------CCCceeeecccChhhhcCc-cccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHH
Confidence 21 2345788999999988652 4588999999999999999999999999998888999999999888876655
Q ss_pred HhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHH
Q 007541 258 VCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLER 337 (599)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~ 337 (599)
+. ......++..+.......+...++..++.+.+||.+
T Consensus 242 ~~------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 279 (342)
T cd07879 242 LE------------------------------------------DKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEK 279 (342)
T ss_pred hc------------------------------------------ccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHH
Confidence 21 111223333333333344455567788999999999
Q ss_pred hcccCCCCCCCHHHHhcCccccCcccCCCCCCCCCCCcchhhHhhhcCCHHHHHHHHHHHHHhhC
Q 007541 338 MLAFEPKDRPTAEEALADPYFKGLAKVEREPSAQPVTKMEFEFERRRITKEDVRELIYREILEYH 402 (599)
Q Consensus 338 mL~~DP~~RpTa~e~L~HP~f~~~~~~~~~p~~~~~~~~~~~~e~~~~~~e~~~~~i~~e~~~~~ 402 (599)
||+.||.+|||++|+|.||||.++...+.++...+ +...-+......+++...||.|+..+.
T Consensus 280 ~l~~dP~~R~~~~e~l~h~~f~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (342)
T cd07879 280 MLELDVDKRLTATEALEHPYFDSFRDADEETEQQP---YDDSLENEKLSVDEWKKHIYKEVKSFS 341 (342)
T ss_pred HcCCChhhCcCHHHHhcCcchhhcccccccCCCCc---ccchhhhhhCCHHHHHHHhhhhhhccC
Confidence 99999999999999999999999876554443222 333344556667888888888865554
No 55
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-46 Score=386.94 Aligned_cols=265 Identities=29% Similarity=0.458 Sum_probs=214.0
Q ss_pred CCCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCc
Q 007541 21 EGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFK 100 (599)
Q Consensus 21 ~~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~ 100 (599)
...+|...+.||+|+||.||++.++++|+.+|||.+... +....+.+.+|+.+|+.|+|||||++++...... + .
T Consensus 15 ~~~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~--~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~--~-~ 89 (313)
T KOG0198|consen 15 EISNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELE--DSPTSESLEREIRILSRLNHPNIVQYYGSSSSRE--N-D 89 (313)
T ss_pred ccchhhhhccccCccceEEEEEEecCCCcceeeeeeecc--cchhHHHHHHHHHHHHhCCCCCEEeeCCcccccc--C-e
Confidence 356789999999999999999999999999999998753 2222666889999999999999999998743221 1 4
Q ss_pred cEEEEEecCC-cCHHHHHHhCC-CCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCC-CCceeeeccCcccccc
Q 007541 101 DIYVVFELME-SDLHQVIKAND-DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANA-DCKLKICDFGLARVAF 177 (599)
Q Consensus 101 ~iylV~E~~~-g~L~~~i~~~~-~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~-~~~lKL~DFGlA~~~~ 177 (599)
.+++.|||+. |+|.++++..+ .+++..++.+.+||++||+|||++||+||||||+|||++. ++.+||+|||++....
T Consensus 90 ~~~i~mEy~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~ 169 (313)
T KOG0198|consen 90 EYNIFMEYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLDPSNGDVKLADFGLAKKLE 169 (313)
T ss_pred eeEeeeeccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEeCCCCeEEeccCccccccc
Confidence 6899999999 69999999887 7999999999999999999999999999999999999999 7999999999998765
Q ss_pred CCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCC-ChhhHHHHHHHhcCCCCHHHHH
Q 007541 178 NDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGK-NVVHQLDIMTDLLGTPSPEAIA 256 (599)
Q Consensus 178 ~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~-~~~~~l~~I~~~lG~p~~e~i~ 256 (599)
.............||+.|||||++.. ...-.+++|||||||++.||+||++||.+. .....+..|.
T Consensus 170 ~~~~~~~~~~~~~Gtp~~maPEvi~~-g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~~~~~ig------------ 236 (313)
T KOG0198|consen 170 SKGTKSDSELSVQGTPNYMAPEVIRN-GEVARRESDIWSLGCTVVEMLTGKPPWSEFFEEAEALLLIG------------ 236 (313)
T ss_pred cccccccccccccCCccccCchhhcC-CCcCCccchhhhcCCEEEeccCCCCcchhhcchHHHHHHHh------------
Confidence 31111122345789999999999974 123345999999999999999999999763 2111111110
Q ss_pred HHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHH
Q 007541 257 RVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLE 336 (599)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~ 336 (599)
.. . ....+...+++++++||.
T Consensus 237 --------------------------------------------------------~~-~--~~P~ip~~ls~~a~~Fl~ 257 (313)
T KOG0198|consen 237 --------------------------------------------------------RE-D--SLPEIPDSLSDEAKDFLR 257 (313)
T ss_pred --------------------------------------------------------cc-C--CCCCCCcccCHHHHHHHH
Confidence 00 0 111334558999999999
Q ss_pred HhcccCCCCCCCHHHHhcCccccCcc
Q 007541 337 RMLAFEPKDRPTAEEALADPYFKGLA 362 (599)
Q Consensus 337 ~mL~~DP~~RpTa~e~L~HP~f~~~~ 362 (599)
+||..||.+||||+++|+|||.+...
T Consensus 258 ~C~~~~p~~Rpta~eLL~hpf~~~~~ 283 (313)
T KOG0198|consen 258 KCFKRDPEKRPTAEELLEHPFLKQNS 283 (313)
T ss_pred HHhhcCcccCcCHHHHhhChhhhccc
Confidence 99999999999999999999998643
No 56
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=4.3e-46 Score=384.54 Aligned_cols=253 Identities=22% Similarity=0.380 Sum_probs=213.9
Q ss_pred CceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCccc-ChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCcc
Q 007541 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFE-HVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKD 101 (599)
Q Consensus 23 ~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~-~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~ 101 (599)
++|++++.||+|+||+||+|.++.+|+.||||++..... .......+.+|+.+|+.++||||+++++++. +...
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~-----~~~~ 75 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEH-----DQRF 75 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhc-----cCCe
Confidence 479999999999999999999999999999999864321 2234556889999999999999999998874 3357
Q ss_pred EEEEEecCC-cCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCCC
Q 007541 102 IYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT 180 (599)
Q Consensus 102 iylV~E~~~-g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~ 180 (599)
+|+||||+. ++|.+++...+.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++......
T Consensus 76 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~~ 155 (291)
T cd05612 76 LYMLMEYVPGGELFSYLRNSGRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDRT 155 (291)
T ss_pred EEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEEecCcchhccCCc
Confidence 999999998 6999999988889999999999999999999999999999999999999999999999999997653221
Q ss_pred CCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHhh
Q 007541 181 PTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVCL 260 (599)
Q Consensus 181 ~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~~ 260 (599)
...+||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+.......+...
T Consensus 156 ------~~~~gt~~y~aPE~~~~--~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~i~~~-------------- 213 (291)
T cd05612 156 ------WTLCGTPEYLAPEVIQS--KGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKILAG-------------- 213 (291)
T ss_pred ------ccccCChhhcCHHHHcC--CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC--------------
Confidence 23478999999999877 67899999999999999999999999887654443333210
Q ss_pred hhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHhcc
Q 007541 261 LLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLA 340 (599)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL~ 340 (599)
.. ......++.+++||++||+
T Consensus 214 --------------------------------------------------------~~---~~~~~~~~~~~~li~~~l~ 234 (291)
T cd05612 214 --------------------------------------------------------KL---EFPRHLDLYAKDLIKKLLV 234 (291)
T ss_pred --------------------------------------------------------Cc---CCCccCCHHHHHHHHHHcC
Confidence 00 0112357889999999999
Q ss_pred cCCCCCCC-----HHHHhcCccccCc
Q 007541 341 FEPKDRPT-----AEEALADPYFKGL 361 (599)
Q Consensus 341 ~DP~~RpT-----a~e~L~HP~f~~~ 361 (599)
.||.+|++ ++|+|+||||+.+
T Consensus 235 ~dp~~R~~~~~~~~~~~l~h~~~~~~ 260 (291)
T cd05612 235 VDRTRRLGNMKNGADDVKNHRWFKSV 260 (291)
T ss_pred CCHHHccCCccCCHHHHhcCccccCC
Confidence 99999995 9999999999865
No 57
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-47 Score=389.19 Aligned_cols=295 Identities=31% Similarity=0.541 Sum_probs=226.3
Q ss_pred CCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCC--CC----ccccceeecCCC
Q 007541 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRH--PD----IVEIKHILLPPS 95 (599)
Q Consensus 22 ~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~H--pn----Iv~l~~v~~~~s 95 (599)
.+||.|+..+|+|+||.|..+.|..++..||||+|+.. ... .+..+-||.+|+++.+ |+ +|.+.++|
T Consensus 88 ~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V-~kY--reAa~iEi~vLqki~~~DP~g~~rcv~m~~wF---- 160 (415)
T KOG0671|consen 88 TNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNV-DKY--REAALIEIEVLQKINESDPNGKFRCVQMRDWF---- 160 (415)
T ss_pred ccceehhhhhcCCcccceEEEeecCCCceehHHHHHHH-HHH--hhHHHHHHHHHHHHHhcCCCCceEEEeeehhh----
Confidence 79999999999999999999999999999999999742 222 2334469999999953 22 55666666
Q ss_pred cCCCccEEEEEecCCcCHHHHHHhCC--CCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCC------------
Q 007541 96 RREFKDIYVVFELMESDLHQVIKAND--DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANA------------ 161 (599)
Q Consensus 96 ~~~~~~iylV~E~~~g~L~~~i~~~~--~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~------------ 161 (599)
+-.+++|||||.|+.++++++++++ .++..+++.+.+||++++++||+.+++|.||||+|||+.+
T Consensus 161 -dyrghiCivfellG~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~~~~~~~~k~~ 239 (415)
T KOG0671|consen 161 -DYRGHICIVFELLGLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSEYFKTYNPKKK 239 (415)
T ss_pred -hccCceEEEEeccChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEeccceEEEeccCCc
Confidence 4557999999999999999999876 6889999999999999999999999999999999999642
Q ss_pred --------CCceeeeccCccccccCCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCC
Q 007541 162 --------DCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPG 233 (599)
Q Consensus 162 --------~~~lKL~DFGlA~~~~~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g 233 (599)
+..|||+|||.|+..... .+..+.|++|||||++++ -.|+.++||||+||||+||.+|..+|++
T Consensus 240 ~~~~r~~ks~~I~vIDFGsAtf~~e~------hs~iVsTRHYRAPEViLg--LGwS~pCDvWSiGCIL~ElytG~~LFqt 311 (415)
T KOG0671|consen 240 VCFIRPLKSTAIKVIDFGSATFDHEH------HSTIVSTRHYRAPEVILG--LGWSQPCDVWSIGCILVELYTGETLFQT 311 (415)
T ss_pred cceeccCCCcceEEEecCCcceeccC------cceeeeccccCCchheec--cCcCCccCceeeeeEEEEeeccceeccc
Confidence 345999999999764322 255689999999999998 6899999999999999999999999999
Q ss_pred CChhhHHHHHHHhcCCCCHHHHHHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcc
Q 007541 234 KNVVHQLDIMTDLLGTPSPEAIARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMR 313 (599)
Q Consensus 234 ~~~~~~l~~I~~~lG~p~~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (599)
.++.+++..|..++|..|...+.+......+ ..+ -++|- +.....-.+++...
T Consensus 312 Hen~EHLaMMerIlGp~P~~mi~r~~~~Kyf-~~~---rldw~----------------------e~~~~~~~k~v~~~- 364 (415)
T KOG0671|consen 312 HENLEHLAMMERILGPIPSRMIKKTRKEKYF-RRG---RLDWP----------------------EVSSKGKSKYVFEP- 364 (415)
T ss_pred CCcHHHHHHHHHhhCCCcHHHhhhhhhHhhh-hcc---cccCc----------------------cccccccchhhhcC-
Confidence 9999999999999997777766653211111 001 11110 00000001111111
Q ss_pred cCCCCCCCCCCCC---CCHHHHHHHHHhcccCCCCCCCHHHHhcCccccCcc
Q 007541 314 KKKPIPFSQKFPN---ANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLA 362 (599)
Q Consensus 314 ~~~~~~~~~~~~~---~s~~a~dLL~~mL~~DP~~RpTa~e~L~HP~f~~~~ 362 (599)
+.++...... .-..+.|||++||.+||.+|+|+.|||.||||+.+.
T Consensus 365 ---ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl~EAL~HpFF~~~~ 413 (415)
T KOG0671|consen 365 ---CKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRITLREALSHPFFARLT 413 (415)
T ss_pred ---CccHHHHhccCcHHHhHHHHHHHHHHccCccccccHHHHhcCHHhhcCC
Confidence 1111111112 223578999999999999999999999999999764
No 58
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-45 Score=391.81 Aligned_cols=263 Identities=31% Similarity=0.519 Sum_probs=226.8
Q ss_pred cCCCCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccC-hhhHHHHHHHHHHHHhcC-CCCccccceeecCCCc
Q 007541 19 YGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEH-VSDATRILREIKLLRLLR-HPDIVEIKHILLPPSR 96 (599)
Q Consensus 19 ~~~~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~-~~~~~~i~rEi~iL~~l~-HpnIv~l~~v~~~~s~ 96 (599)
......|++.+.||+|.||+||+|+++.||+.+|+|+|.+.... ..+...+.+|+.+|+++. |||||.++++|.+.
T Consensus 31 ~~~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~-- 108 (382)
T KOG0032|consen 31 EDIKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDP-- 108 (382)
T ss_pred ccccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcC--
Confidence 35567999999999999999999999999999999999764332 234567889999999999 99999999999544
Q ss_pred CCCccEEEEEecCC-cCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCC----CceeeeccC
Q 007541 97 REFKDIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANAD----CKLKICDFG 171 (599)
Q Consensus 97 ~~~~~iylV~E~~~-g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~----~~lKL~DFG 171 (599)
..+|+|||++. |+|++.|... .+++..+..++.||+.+++|||+.||+||||||+|+|+... +.+|++|||
T Consensus 109 ---~~~~lvmEL~~GGeLfd~i~~~-~~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFG 184 (382)
T KOG0032|consen 109 ---DSVYLVMELCEGGELFDRIVKK-HYSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDEGSGRIKLIDFG 184 (382)
T ss_pred ---CeEEEEEEecCCchHHHHHHHc-cCCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccCCCCcEEEeeCC
Confidence 48999999999 6999999876 49999999999999999999999999999999999998653 579999999
Q ss_pred ccccccCCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCC
Q 007541 172 LARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPS 251 (599)
Q Consensus 172 lA~~~~~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~ 251 (599)
+|..... .......+||+.|+|||++.. ..|+..+||||+|||+|.||+|.+||.+.+.......|...
T Consensus 185 la~~~~~----~~~~~~~~Gtp~y~APEvl~~--~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~~----- 253 (382)
T KOG0032|consen 185 LAKFIKP----GERLHTIVGTPEYVAPEVLGG--RPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILRG----- 253 (382)
T ss_pred CceEccC----CceEeeecCCccccCchhhcC--CCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHcC-----
Confidence 9987644 234577899999999999987 68999999999999999999999999998866555444321
Q ss_pred HHHHHHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHH
Q 007541 252 PEAIARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLA 331 (599)
Q Consensus 252 ~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a 331 (599)
........|+.++..|
T Consensus 254 ----------------------------------------------------------------~~~f~~~~w~~is~~a 269 (382)
T KOG0032|consen 254 ----------------------------------------------------------------DFDFTSEPWDDISESA 269 (382)
T ss_pred ----------------------------------------------------------------CCCCCCCCccccCHHH
Confidence 1122335577889999
Q ss_pred HHHHHHhcccCCCCCCCHHHHhcCccccCcc
Q 007541 332 LRLLERMLAFEPKDRPTAEEALADPYFKGLA 362 (599)
Q Consensus 332 ~dLL~~mL~~DP~~RpTa~e~L~HP~f~~~~ 362 (599)
++||.+||..||.+|+||.++|+|||+++..
T Consensus 270 kd~i~~ll~~dp~~R~ta~~~L~HpWi~~~~ 300 (382)
T KOG0032|consen 270 KDFIRKLLEFDPRKRLTAAQALQHPWIKSIG 300 (382)
T ss_pred HHHHHHhcccCcccCCCHHHHhcCccccCCc
Confidence 9999999999999999999999999998763
No 59
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.1e-47 Score=372.09 Aligned_cols=263 Identities=29% Similarity=0.495 Sum_probs=218.9
Q ss_pred CceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccC-----h-hhHHHHHHHHHHHHhcC-CCCccccceeecCCC
Q 007541 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEH-----V-SDATRILREIKLLRLLR-HPDIVEIKHILLPPS 95 (599)
Q Consensus 23 ~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~-----~-~~~~~i~rEi~iL~~l~-HpnIv~l~~v~~~~s 95 (599)
++|.-.+.||.|..++|.+|.++.||+.+|+|+|...... . .-.+...+|+.||+++. ||+|++|.++|.+++
T Consensus 17 ~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~s 96 (411)
T KOG0599|consen 17 AKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESDA 96 (411)
T ss_pred hhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCcc
Confidence 4677789999999999999999999999999999632211 1 11234568999999996 999999999996554
Q ss_pred cCCCccEEEEEecCC-cCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccc
Q 007541 96 RREFKDIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLAR 174 (599)
Q Consensus 96 ~~~~~~iylV~E~~~-g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~ 174 (599)
.+++|||+|. |.|++++.+.-.++|...+.|++||+.|+.|||.++||||||||+|||+++|.++||+|||.|.
T Consensus 97 -----F~FlVFdl~prGELFDyLts~VtlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILlddn~~i~isDFGFa~ 171 (411)
T KOG0599|consen 97 -----FVFLVFDLMPRGELFDYLTSKVTLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILLDDNMNIKISDFGFAC 171 (411)
T ss_pred -----hhhhhhhhcccchHHHHhhhheeecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheeeccccceEEeccceee
Confidence 6899999999 8999999988899999999999999999999999999999999999999999999999999998
Q ss_pred cccCCCCCcccccccccCccccCccccccc----cCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCC
Q 007541 175 VAFNDTPTAIFWTDYVATRWYRAPELCGSF----FSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTP 250 (599)
Q Consensus 175 ~~~~~~~~~~~~t~~~gt~~Y~APE~l~~~----~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p 250 (599)
....+ ..++..|||+.|.|||.+... ..+|+..+|+|++|+|+|.||.|.+||-.....-.+..|..
T Consensus 172 ~l~~G----ekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~Ime----- 242 (411)
T KOG0599|consen 172 QLEPG----EKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMIME----- 242 (411)
T ss_pred ccCCc----hhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHh-----
Confidence 76433 346788999999999987532 25699999999999999999999999954433333333321
Q ss_pred CHHHHHHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHH
Q 007541 251 SPEAIARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPL 330 (599)
Q Consensus 251 ~~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 330 (599)
.+...-+..|.+++..
T Consensus 243 ----------------------------------------------------------------GkyqF~speWadis~~ 258 (411)
T KOG0599|consen 243 ----------------------------------------------------------------GKYQFRSPEWADISAT 258 (411)
T ss_pred ----------------------------------------------------------------cccccCCcchhhcccc
Confidence 1111223446678889
Q ss_pred HHHHHHHhcccCCCCCCCHHHHhcCccccCccc
Q 007541 331 ALRLLERMLAFEPKDRPTAEEALADPYFKGLAK 363 (599)
Q Consensus 331 a~dLL~~mL~~DP~~RpTa~e~L~HP~f~~~~~ 363 (599)
++|||.+||+.||.+|+|++|+|+||||..+..
T Consensus 259 ~KdLIsrlLqVdp~~Ritake~LaHpff~q~~~ 291 (411)
T KOG0599|consen 259 VKDLISRLLQVDPTKRITAKEALAHPFFIQIAQ 291 (411)
T ss_pred HHHHHHHHHeeCchhcccHHHHhcChHHHHHHH
Confidence 999999999999999999999999999977654
No 60
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-45 Score=380.64 Aligned_cols=275 Identities=28% Similarity=0.428 Sum_probs=225.2
Q ss_pred CCCCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCC
Q 007541 20 GEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREF 99 (599)
Q Consensus 20 ~~~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~ 99 (599)
...+.|++.++||.|..++||+|+...+++.||||++.....+. +...+.+|+..|+.++||||++++..|...
T Consensus 23 ~n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~-~ld~l~kE~~~msl~~HPNIv~~~~sFvv~----- 96 (516)
T KOG0582|consen 23 LNAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNN-DLDALRKEVQTMSLIDHPNIVTYHCSFVVD----- 96 (516)
T ss_pred CCccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhh-hHHHHHHHHHHhhhcCCCCcceEEEEEEec-----
Confidence 34689999999999999999999999999999999998654443 378899999999999999999999999654
Q ss_pred ccEEEEEecCC-cCHHHHHHhC--CCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccc
Q 007541 100 KDIYVVFELME-SDLHQVIKAN--DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVA 176 (599)
Q Consensus 100 ~~iylV~E~~~-g~L~~~i~~~--~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~ 176 (599)
..+|+||.+|. |+++++++.. .+++|..|..|++++|+||.|||.+|-||||||+.||||+.+|.|||+|||.+...
T Consensus 97 ~~LWvVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l 176 (516)
T KOG0582|consen 97 SELWVVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNGHIHRDVKAGNILIDSDGTVKLADFGVSASL 176 (516)
T ss_pred ceeEEeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEEcCCCcEEEcCceeeeee
Confidence 47999999999 7999999874 47999999999999999999999999999999999999999999999999998766
Q ss_pred cCCCCCc-ccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHH
Q 007541 177 FNDTPTA-IFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAI 255 (599)
Q Consensus 177 ~~~~~~~-~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i 255 (599)
....... ..+...+||++|||||++...-.+|+.++||||||++..||.+|..||..--.... ++.++-|.|+.-..
T Consensus 177 ~~~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkv--Ll~tLqn~pp~~~t 254 (516)
T KOG0582|consen 177 FDSGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKV--LLLTLQNDPPTLLT 254 (516)
T ss_pred cccCceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHH--HHHHhcCCCCCccc
Confidence 5433222 22267799999999999654447899999999999999999999999976544332 23444455542111
Q ss_pred HHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHH
Q 007541 256 ARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLL 335 (599)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL 335 (599)
.. ...+ .....+..++.+|
T Consensus 255 ~~------------------------------------------~~~d-------------------~~k~~~ksf~e~i 273 (516)
T KOG0582|consen 255 SG------------------------------------------LDKD-------------------EDKKFSKSFREMI 273 (516)
T ss_pred cc------------------------------------------CChH-------------------HhhhhcHHHHHHH
Confidence 00 0000 0012345789999
Q ss_pred HHhcccCCCCCCCHHHHhcCccccCccc
Q 007541 336 ERMLAFEPKDRPTAEEALADPYFKGLAK 363 (599)
Q Consensus 336 ~~mL~~DP~~RpTa~e~L~HP~f~~~~~ 363 (599)
..||+.||.+||||+++|+|+||+....
T Consensus 274 ~~CL~kDP~kRptAskLlkh~FFk~~k~ 301 (516)
T KOG0582|consen 274 ALCLVKDPSKRPTASKLLKHAFFKKAKS 301 (516)
T ss_pred HHHhhcCcccCCCHHHHhccHHHhhccc
Confidence 9999999999999999999999997643
No 61
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-46 Score=396.99 Aligned_cols=257 Identities=30% Similarity=0.529 Sum_probs=223.1
Q ss_pred CCCCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCC
Q 007541 20 GEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREF 99 (599)
Q Consensus 20 ~~~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~ 99 (599)
.-..+|....+||+|+.|.||.|+...+++.||||.+... .....+.+++|+.+|+..+|+|||++++.|+-.
T Consensus 270 dP~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~--~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~----- 342 (550)
T KOG0578|consen 270 DPRSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLR--KQPKKELLLNEILVMRDLHHPNIVNFLDSYLVG----- 342 (550)
T ss_pred ChhhhhcchhhhccccccceeeeeeccCCceEEEEEEEec--cCCchhhhHHHHHHHHhccchHHHHHHHHhccc-----
Confidence 4457899999999999999999999999999999999753 334456788999999999999999999998644
Q ss_pred ccEEEEEecCC-cCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccC
Q 007541 100 KDIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFN 178 (599)
Q Consensus 100 ~~iylV~E~~~-g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~ 178 (599)
..+++|||||+ |+|.+++... .++|.++..|++.+++||+|||.+||+|||||.+|||+..+|.+||+|||++..+..
T Consensus 343 deLWVVMEym~ggsLTDvVt~~-~~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~ 421 (550)
T KOG0578|consen 343 DELWVVMEYMEGGSLTDVVTKT-RMTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISE 421 (550)
T ss_pred ceeEEEEeecCCCchhhhhhcc-cccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEeccCCcEEEeeeeeeecccc
Confidence 57999999999 5888887665 599999999999999999999999999999999999999999999999999987654
Q ss_pred CCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHH
Q 007541 179 DTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARV 258 (599)
Q Consensus 179 ~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~ 258 (599)
... .-...+||++|||||++.. ..|++++||||||+++.||+-|.+||-..+....+.+|.. -|+|..
T Consensus 422 ~~~---KR~TmVGTPYWMAPEVvtr--k~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLIa~-ng~P~l------ 489 (550)
T KOG0578|consen 422 EQS---KRSTMVGTPYWMAPEVVTR--KPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIAT-NGTPKL------ 489 (550)
T ss_pred ccC---ccccccCCCCccchhhhhh--cccCccccchhhhhHHHHHhcCCCCccCCChHHHHHHHhh-cCCCCc------
Confidence 433 2356799999999999977 7899999999999999999999999988777776666653 233221
Q ss_pred hhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHh
Q 007541 259 CLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERM 338 (599)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~m 338 (599)
+....+|+.++|||.+|
T Consensus 490 ---------------------------------------------------------------k~~~klS~~~kdFL~~c 506 (550)
T KOG0578|consen 490 ---------------------------------------------------------------KNPEKLSPELKDFLDRC 506 (550)
T ss_pred ---------------------------------------------------------------CCccccCHHHHHHHHHH
Confidence 12246899999999999
Q ss_pred cccCCCCCCCHHHHhcCcccc
Q 007541 339 LAFEPKDRPTAEEALADPYFK 359 (599)
Q Consensus 339 L~~DP~~RpTa~e~L~HP~f~ 359 (599)
|+.|+.+|+||.|+|+||||+
T Consensus 507 L~~dv~~RasA~eLL~HpFl~ 527 (550)
T KOG0578|consen 507 LVVDVEQRASAKELLEHPFLK 527 (550)
T ss_pred hhcchhcCCCHHHHhcChhhh
Confidence 999999999999999999995
No 62
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=1.3e-45 Score=387.99 Aligned_cols=254 Identities=25% Similarity=0.416 Sum_probs=214.7
Q ss_pred CCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcc-cChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCc
Q 007541 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIF-EHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFK 100 (599)
Q Consensus 22 ~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~-~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~ 100 (599)
-+.|++.+.||+|+||.||+|+++.+|+.||||++.... ........+.+|+.+|+.++||||+++++++.. ..
T Consensus 17 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-----~~ 91 (329)
T PTZ00263 17 LSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQD-----EN 91 (329)
T ss_pred chheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEc-----CC
Confidence 478999999999999999999999999999999986432 222345678899999999999999999999844 35
Q ss_pred cEEEEEecCC-cCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCC
Q 007541 101 DIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFND 179 (599)
Q Consensus 101 ~iylV~E~~~-g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~ 179 (599)
.+|+||||+. ++|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 92 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~ 171 (329)
T PTZ00263 92 RVYFLLEFVVGGELFTHLRKAGRFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDR 171 (329)
T ss_pred EEEEEEcCCCCChHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEECCCCCEEEeeccCceEcCCC
Confidence 7999999998 599999998888999999999999999999999999999999999999999999999999999865322
Q ss_pred CCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHh
Q 007541 180 TPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVC 259 (599)
Q Consensus 180 ~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~ 259 (599)
. ...+||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+....+..|.. +
T Consensus 172 ~------~~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~--~----------- 230 (329)
T PTZ00263 172 T------FTLCGTPEYLAPEVIQS--KGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILA--G----------- 230 (329)
T ss_pred c------ceecCChhhcCHHHHcC--CCCCCcceeechHHHHHHHHcCCCCCCCCCHHHHHHHHhc--C-----------
Confidence 1 23578999999999877 6789999999999999999999999987665443333221 0
Q ss_pred hhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHhc
Q 007541 260 LLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERML 339 (599)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL 339 (599)
... ....+++.+.+||.+||
T Consensus 231 ---------------------------------------------------------~~~---~p~~~~~~~~~li~~~L 250 (329)
T PTZ00263 231 ---------------------------------------------------------RLK---FPNWFDGRARDLVKGLL 250 (329)
T ss_pred ---------------------------------------------------------CcC---CCCCCCHHHHHHHHHHh
Confidence 000 11236778999999999
Q ss_pred ccCCCCCCC-----HHHHhcCccccCc
Q 007541 340 AFEPKDRPT-----AEEALADPYFKGL 361 (599)
Q Consensus 340 ~~DP~~RpT-----a~e~L~HP~f~~~ 361 (599)
+.||.+|++ ++++|+||||.+.
T Consensus 251 ~~dP~~R~~~~~~~~~~ll~hp~f~~~ 277 (329)
T PTZ00263 251 QTDHTKRLGTLKGGVADVKNHPYFHGA 277 (329)
T ss_pred hcCHHHcCCCCCCCHHHHhcCCccCCC
Confidence 999999997 7999999999863
No 63
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=1.1e-45 Score=387.56 Aligned_cols=250 Identities=25% Similarity=0.447 Sum_probs=209.3
Q ss_pred EEEeecCceEEEEEEECCCCcEEEEEEecCccc-ChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEEEEEe
Q 007541 29 EVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFE-HVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVVFE 107 (599)
Q Consensus 29 ~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~-~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~iylV~E 107 (599)
+.||+|+||+||+|.++.+|+.||||+++.... ......++.+|+.+|+.++||||+++++++.. ...+|+|||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~-----~~~~~lv~e 75 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQT-----HDRLCFVME 75 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEc-----CCEEEEEEe
Confidence 469999999999999999999999999975322 22345677899999999999999999999843 357999999
Q ss_pred cCC-cCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCCCCCcccc
Q 007541 108 LME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFW 186 (599)
Q Consensus 108 ~~~-g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~~~~~~~ 186 (599)
|+. ++|.+++..++.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++...... ...
T Consensus 76 ~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~---~~~ 152 (323)
T cd05571 76 YANGGELFFHLSRERVFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDG---ATM 152 (323)
T ss_pred CCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEeeCCCCcccccCC---Ccc
Confidence 998 5899999888889999999999999999999999999999999999999999999999999997532211 112
Q ss_pred cccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHhhhhhhhh
Q 007541 187 TDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVCLLLNIIW 266 (599)
Q Consensus 187 t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~~~~~~~~ 266 (599)
...+||+.|+|||++.+ ..|+.++||||+||++|+|++|+.||.+.+....+..+...
T Consensus 153 ~~~~gt~~y~aPE~~~~--~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~-------------------- 210 (323)
T cd05571 153 KTFCGTPEYLAPEVLED--NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILME-------------------- 210 (323)
T ss_pred cceecCccccChhhhcC--CCCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHHHcC--------------------
Confidence 34679999999999876 67999999999999999999999999876654433322110
Q ss_pred cCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCC
Q 007541 267 CGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDR 346 (599)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL~~DP~~R 346 (599)
.. .....+++.+.+||++||+.||++|
T Consensus 211 --------------------------------------------------~~---~~p~~~~~~~~~li~~~L~~dP~~R 237 (323)
T cd05571 211 --------------------------------------------------EI---RFPRTLSPEAKSLLAGLLKKDPKQR 237 (323)
T ss_pred --------------------------------------------------CC---CCCCCCCHHHHHHHHHHccCCHHHc
Confidence 00 0113468889999999999999999
Q ss_pred C-----CHHHHhcCccccCc
Q 007541 347 P-----TAEEALADPYFKGL 361 (599)
Q Consensus 347 p-----Ta~e~L~HP~f~~~ 361 (599)
| ++.++|+||||.++
T Consensus 238 ~~~~~~~~~~ll~h~~f~~~ 257 (323)
T cd05571 238 LGGGPEDAKEIMEHRFFASI 257 (323)
T ss_pred CCCCCCCHHHHHcCCCcCCC
Confidence 9 89999999999875
No 64
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=3.7e-45 Score=378.66 Aligned_cols=291 Identities=36% Similarity=0.632 Sum_probs=233.6
Q ss_pred cCCCCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCC
Q 007541 19 YGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRRE 98 (599)
Q Consensus 19 ~~~~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~ 98 (599)
++.-++|++++.||.|+||.||+|.++.+++.||+|.+...... .....+.+|+.+++.++|+||+++++++..
T Consensus 2 ~~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~----- 75 (301)
T cd07873 2 FGKLETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEE-GAPCTAIREVSLLKDLKHANIVTLHDIIHT----- 75 (301)
T ss_pred CccccceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEeccccc-CchhHHHHHHHHHHhcCCCCcceEEEEEec-----
Confidence 46678999999999999999999999999999999998643222 233456789999999999999999999853
Q ss_pred CccEEEEEecCCcCHHHHHHhC-CCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCcccccc
Q 007541 99 FKDIYVVFELMESDLHQVIKAN-DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAF 177 (599)
Q Consensus 99 ~~~iylV~E~~~g~L~~~i~~~-~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~ 177 (599)
...+|+||||+.++|.+++... ..+++..++.++.||+.||.|||+.||+|+||||+|||++.++.+||+|||++....
T Consensus 76 ~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~ 155 (301)
T cd07873 76 EKSLTLVFEYLDKDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKS 155 (301)
T ss_pred CCeEEEEEeccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEECCCCcEEECcCcchhccC
Confidence 3479999999999999988764 468999999999999999999999999999999999999999999999999997543
Q ss_pred CCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHH
Q 007541 178 NDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIAR 257 (599)
Q Consensus 178 ~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~ 257 (599)
.... ......++..|+|||++.+. ..++.++|||||||++++|++|++||.+.+..+++..+...++.+....|..
T Consensus 156 ~~~~---~~~~~~~~~~y~~PE~~~~~-~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (301)
T cd07873 156 IPTK---TYSNEVVTLWYRPPDILLGS-TDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPG 231 (301)
T ss_pred CCCC---cccccceeecccCcHHHhCC-CCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchh
Confidence 2211 12344678899999987652 4688899999999999999999999999999999999999999888765543
Q ss_pred HhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHH
Q 007541 258 VCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLER 337 (599)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~ 337 (599)
+.. ...|.. ...............+..++.+.+||.+
T Consensus 232 ~~~--~~~~~~-----------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~li~~ 268 (301)
T cd07873 232 ILS--NEEFKS-----------------------------------------YNYPKYRADCLHNHAPRLDSDGAELLSK 268 (301)
T ss_pred hhc--cccccc-----------------------------------------cccCccccccHHhhcCCCCHHHHHHHHH
Confidence 100 000000 0000000111112234678899999999
Q ss_pred hcccCCCCCCCHHHHhcCccccCcc
Q 007541 338 MLAFEPKDRPTAEEALADPYFKGLA 362 (599)
Q Consensus 338 mL~~DP~~RpTa~e~L~HP~f~~~~ 362 (599)
||++||.+|||++|+|+||||+.+.
T Consensus 269 ml~~dp~~R~t~~eil~h~~f~~~~ 293 (301)
T cd07873 269 LLQFEGRKRISAEEAMKHPYFHCLG 293 (301)
T ss_pred HhcCCcccCcCHHHHhcCccccccc
Confidence 9999999999999999999998764
No 65
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=3.6e-45 Score=385.24 Aligned_cols=331 Identities=44% Similarity=0.764 Sum_probs=265.8
Q ss_pred CCCCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhc-CCCCccccceeecCCCcCC
Q 007541 20 GEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLL-RHPDIVEIKHILLPPSRRE 98 (599)
Q Consensus 20 ~~~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l-~HpnIv~l~~v~~~~s~~~ 98 (599)
...++|++.+.||+|+||.||+|.+..+|+.||||++...+........+.+|+.+++.+ +|+||+++++++... +
T Consensus 4 ~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~---~ 80 (337)
T cd07852 4 HILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAE---N 80 (337)
T ss_pred hhhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccC---C
Confidence 356789999999999999999999999999999999876555555566778999999999 999999999988432 2
Q ss_pred CccEEEEEecCCcCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccC
Q 007541 99 FKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFN 178 (599)
Q Consensus 99 ~~~iylV~E~~~g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~ 178 (599)
...+|+||||+.++|.+++... .+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++....
T Consensus 81 ~~~~~lv~e~~~~~L~~~~~~~-~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~ 159 (337)
T cd07852 81 DKDIYLVFEYMETDLHAVIRAN-ILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLNSDCRVKLADFGLARSLSE 159 (337)
T ss_pred CceEEEEecccccCHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccchhcccc
Confidence 3468999999999999999876 789999999999999999999999999999999999999999999999999986543
Q ss_pred CCCC--cccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHH
Q 007541 179 DTPT--AIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIA 256 (599)
Q Consensus 179 ~~~~--~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~ 256 (599)
.... ......++++.+|+|||++.+. ..++.++||||+||++++|++|++||.+.+..+.+..+....|.++.+.+.
T Consensus 160 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (337)
T cd07852 160 LEENPENPVLTDYVATRWYRAPEILLGS-TRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIE 238 (337)
T ss_pred ccccccCcchhcccccccccCceeeecc-ccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHH
Confidence 2211 1123456789999999987542 567889999999999999999999999999999999999999988887766
Q ss_pred HHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHH
Q 007541 257 RVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLE 336 (599)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~ 336 (599)
.+ ........+..+.......+....+..+..+.+||.
T Consensus 239 ~~------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 276 (337)
T cd07852 239 SI------------------------------------------KSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLK 276 (337)
T ss_pred HH------------------------------------------HhhhHHHhhhhcccccccchhhhccCCCHHHHHHHH
Confidence 52 112223333444444445555666778999999999
Q ss_pred HhcccCCCCCCCHHHHhcCccccCcccCCCCCCCCCCCcchhhHhhhcCCHHHHHHHHHHHH
Q 007541 337 RMLAFEPKDRPTAEEALADPYFKGLAKVEREPSAQPVTKMEFEFERRRITKEDVRELIYREI 398 (599)
Q Consensus 337 ~mL~~DP~~RpTa~e~L~HP~f~~~~~~~~~p~~~~~~~~~~~~e~~~~~~e~~~~~i~~e~ 398 (599)
+||+.||.+|||+.++|+||||+.+....+++.........+. ..++++..+.|..+|+||
T Consensus 277 ~~l~~~P~~Rps~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 337 (337)
T cd07852 277 KLLVFNPNKRLTAEEALEHPYVAQFHNPSDEPVLPYPITIPLD-DNVKLSVAEYRNKLYEEI 337 (337)
T ss_pred HhccCCcccccCHHHHhhChhhhhhccCCCCCCCCCCccCCcc-ccceeeHHHHHhhhhhcC
Confidence 9999999999999999999999998777666544322222222 234556667777777663
No 66
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=100.00 E-value=1.4e-44 Score=380.15 Aligned_cols=323 Identities=48% Similarity=0.863 Sum_probs=267.8
Q ss_pred ccCCCCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcC
Q 007541 18 EYGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRR 97 (599)
Q Consensus 18 ~~~~~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~ 97 (599)
.+..+++|++++.||.|+||.||+|.+..+++.||||++............+.+|+.+++.++||||+++.+++...
T Consensus 5 ~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~--- 81 (328)
T cd07856 5 VFEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISP--- 81 (328)
T ss_pred eeccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecC---
Confidence 46788999999999999999999999999999999999875444444556778999999999999999999998543
Q ss_pred CCccEEEEEecCCcCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCcccccc
Q 007541 98 EFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAF 177 (599)
Q Consensus 98 ~~~~iylV~E~~~g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~ 177 (599)
...+|+|+||++++|.+++... .+++..++.++.||+.||.|||+.||+||||+|+|||++.++.+||+|||+++...
T Consensus 82 -~~~~~lv~e~~~~~L~~~~~~~-~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~ 159 (328)
T cd07856 82 -LEDIYFVTELLGTDLHRLLTSR-PLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILINENCDLKICDFGLARIQD 159 (328)
T ss_pred -CCcEEEEeehhccCHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeECCCCCEEeCccccccccC
Confidence 2468999999999999888754 68999999999999999999999999999999999999999999999999997532
Q ss_pred CCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHH
Q 007541 178 NDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIAR 257 (599)
Q Consensus 178 ~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~ 257 (599)
. ....+.++..|+|||.+.+. ..++.++||||+||++++|++|+++|.+.+.......+.+.+|.++.+.+..
T Consensus 160 ~------~~~~~~~~~~y~aPE~~~~~-~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (328)
T cd07856 160 P------QMTGYVSTRYYRAPEIMLTW-QKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINT 232 (328)
T ss_pred C------CcCCCcccccccCceeeecc-CCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHh
Confidence 2 12345678899999987542 4688999999999999999999999999998888899999999998877654
Q ss_pred HhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHH
Q 007541 258 VCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLER 337 (599)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~ 337 (599)
+......+++..+....+.+....++..++.+.+||++
T Consensus 233 ------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 270 (328)
T cd07856 233 ------------------------------------------ICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEK 270 (328)
T ss_pred ------------------------------------------ccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHH
Confidence 22222334445555555566666677889999999999
Q ss_pred hcccCCCCCCCHHHHhcCccccCcccCCCCCCCCCCCcchhhHhhhcCCHHHHHHHHHH
Q 007541 338 MLAFEPKDRPTAEEALADPYFKGLAKVEREPSAQPVTKMEFEFERRRITKEDVRELIYR 396 (599)
Q Consensus 338 mL~~DP~~RpTa~e~L~HP~f~~~~~~~~~p~~~~~~~~~~~~e~~~~~~e~~~~~i~~ 396 (599)
||+.||++|||++++|.||||..+..+..++.+. .++++.+....+..+.|+-+.|.
T Consensus 271 ~l~~~P~~R~t~~ell~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 327 (328)
T cd07856 271 MLVFDPQKRISAAEALAHPYLAPYHDPTDEPVAE--EKFDWSFNDADLPVDTWKVMMYS 327 (328)
T ss_pred HcCCChhhCCCHHHHhcCCccccccCCccccCch--hhcCCchhcccCCHHHHHHHhcC
Confidence 9999999999999999999999887766655533 36677777777888887766553
No 67
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=1.4e-44 Score=369.89 Aligned_cols=282 Identities=38% Similarity=0.638 Sum_probs=227.4
Q ss_pred ceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEE
Q 007541 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIY 103 (599)
Q Consensus 24 rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~iy 103 (599)
.|++++.||+|++|.||+|.++.++..||||++............+.+|+.+++.++||||+++++++.. ...+|
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~~ 75 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQ-----ESRLY 75 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEee-----CCeEE
Confidence 4899999999999999999999999999999987543333344667899999999999999999999854 34799
Q ss_pred EEEecCCcCHHHHHHhC---CCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCCC
Q 007541 104 VVFELMESDLHQVIKAN---DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT 180 (599)
Q Consensus 104 lV~E~~~g~L~~~i~~~---~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~ 180 (599)
+||||+.++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......
T Consensus 76 ~v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~ 155 (285)
T cd07861 76 LIFEFLSMDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPV 155 (285)
T ss_pred EEEecCCCCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEcCCCcEEECcccceeecCCCc
Confidence 99999999999988653 468999999999999999999999999999999999999999999999999997543221
Q ss_pred CCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHhh
Q 007541 181 PTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVCL 260 (599)
Q Consensus 181 ~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~~ 260 (599)
.......++..|+|||++.+. ..++.++|||||||++++|++|++||.+.+..+.+..+...+|.+....+.....
T Consensus 156 ---~~~~~~~~~~~y~aPE~~~~~-~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (285)
T cd07861 156 ---RVYTHEVVTLWYRAPEVLLGS-PRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTS 231 (285)
T ss_pred ---ccccCCcccccccChHHhcCC-CCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchh
Confidence 112344678899999987552 4678899999999999999999999999988888888888888776655433110
Q ss_pred hhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHhcc
Q 007541 261 LLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLA 340 (599)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL~ 340 (599)
..++...........+.......++++.+||.+||+
T Consensus 232 --------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~ 267 (285)
T cd07861 232 --------------------------------------------LPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLI 267 (285)
T ss_pred --------------------------------------------hHHHHhhccccCcchhHHhcCCCCHHHHHHHHHHhc
Confidence 001111111111111222334578999999999999
Q ss_pred cCCCCCCCHHHHhcCccc
Q 007541 341 FEPKDRPTAEEALADPYF 358 (599)
Q Consensus 341 ~DP~~RpTa~e~L~HP~f 358 (599)
.||.+|||+.++|+||||
T Consensus 268 ~dP~~Rpt~~~ll~~~~~ 285 (285)
T cd07861 268 YDPAKRISAKKALNHPYF 285 (285)
T ss_pred CChhhCCCHHHHhcCCCC
Confidence 999999999999999998
No 68
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=7e-45 Score=387.64 Aligned_cols=262 Identities=25% Similarity=0.380 Sum_probs=212.9
Q ss_pred CceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCccc-ChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCcc
Q 007541 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFE-HVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKD 101 (599)
Q Consensus 23 ~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~-~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~ 101 (599)
++|++++.||+|+||+||+|.++.+++.||||++..... .......+.+|+.+|+.++|+||+++++.+.+ ...
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~-----~~~ 75 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQD-----KLN 75 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEec-----CCe
Confidence 479999999999999999999999999999999975322 22334567889999999999999999999843 357
Q ss_pred EEEEEecCC-cCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCCC
Q 007541 102 IYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT 180 (599)
Q Consensus 102 iylV~E~~~-g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~ 180 (599)
+||||||+. ++|.+++...+.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++......
T Consensus 76 ~~lv~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~ 155 (363)
T cd05628 76 LYLIMEFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAH 155 (363)
T ss_pred EEEEEcCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCCEEEeeccCcccccccc
Confidence 999999998 5999999988899999999999999999999999999999999999999999999999999997542211
Q ss_pred CC--------------------------------cccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCC
Q 007541 181 PT--------------------------------AIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGK 228 (599)
Q Consensus 181 ~~--------------------------------~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~ 228 (599)
.. .......+||+.|+|||++.+ ..++.++|||||||++|+|++|+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~--~~~~~~~DvwSlGvil~ell~G~ 233 (363)
T cd05628 156 RTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQ--TGYNKLCDWWSLGVIMYEMLIGY 233 (363)
T ss_pred cccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcC--CCCCCchhhhhhHHHHHHHHhCC
Confidence 00 001124589999999999876 67999999999999999999999
Q ss_pred CCCCCCChhhHHHHHHHhcCCCCHHHHHHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHH
Q 007541 229 PLFPGKNVVHQLDIMTDLLGTPSPEAIARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRY 308 (599)
Q Consensus 229 ~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (599)
.||.+.+..+.+..|.....
T Consensus 234 ~Pf~~~~~~~~~~~i~~~~~------------------------------------------------------------ 253 (363)
T cd05628 234 PPFCSETPQETYKKVMNWKE------------------------------------------------------------ 253 (363)
T ss_pred CCCCCCCHHHHHHHHHcCcC------------------------------------------------------------
Confidence 99988776555444432100
Q ss_pred HHhcccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCC---CCCHHHHhcCccccCc
Q 007541 309 LSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKD---RPTAEEALADPYFKGL 361 (599)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL~~DP~~---RpTa~e~L~HP~f~~~ 361 (599)
...+.. ...+++.+++||.+|+. +|.+ ||+++|+|+||||+++
T Consensus 254 --------~~~~p~-~~~~s~~~~~li~~l~~-~~~~r~~r~~~~ei~~hp~f~~~ 299 (363)
T cd05628 254 --------TLIFPP-EVPISEKAKDLILRFCC-EWEHRIGAPGVEEIKTNPFFEGV 299 (363)
T ss_pred --------cccCCC-cCCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhCCCCCCCC
Confidence 000111 12467899999999886 5554 5899999999999875
No 69
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=3.8e-45 Score=389.11 Aligned_cols=262 Identities=26% Similarity=0.425 Sum_probs=214.2
Q ss_pred CceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcc-cChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCcc
Q 007541 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIF-EHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKD 101 (599)
Q Consensus 23 ~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~-~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~ 101 (599)
++|++++.||+|+||+||+|++..+|+.||||++.... ........+.+|+.+|+.++||||+++++++.. ...
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~-----~~~ 75 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQD-----ENY 75 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEc-----CCe
Confidence 47999999999999999999999999999999997432 122344567889999999999999999999854 357
Q ss_pred EEEEEecCC-cCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCCC
Q 007541 102 IYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT 180 (599)
Q Consensus 102 iylV~E~~~-g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~ 180 (599)
+||||||+. ++|.+++...+.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++.......
T Consensus 76 ~~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 155 (364)
T cd05599 76 LYLIMEYLPGGDMMTLLMKKDTFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSH 155 (364)
T ss_pred EEEEECCCCCcHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEeecccceeccccc
Confidence 999999998 6999999888889999999999999999999999999999999999999999999999999987542211
Q ss_pred CCc-----------------------------------ccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHH
Q 007541 181 PTA-----------------------------------IFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELL 225 (599)
Q Consensus 181 ~~~-----------------------------------~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLl 225 (599)
... ......+||+.|+|||++.. ..++.++||||||||+|+|+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwSlG~il~el~ 233 (364)
T cd05599 156 RTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQ--TGYNKECDWWSLGVIMYEML 233 (364)
T ss_pred cccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcC--CCCCCeeeeecchhHHHHhh
Confidence 000 00113479999999999876 67999999999999999999
Q ss_pred hCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHH
Q 007541 226 TGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKA 305 (599)
Q Consensus 226 tG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (599)
+|.+||.+.+....+..+.+..
T Consensus 234 ~G~~Pf~~~~~~~~~~~i~~~~---------------------------------------------------------- 255 (364)
T cd05599 234 VGYPPFCSDNPQETYRKIINWK---------------------------------------------------------- 255 (364)
T ss_pred cCCCCCCCCCHHHHHHHHHcCC----------------------------------------------------------
Confidence 9999998877554433332100
Q ss_pred HHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCC---HHHHhcCccccCc
Q 007541 306 RRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPT---AEEALADPYFKGL 361 (599)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL~~DP~~RpT---a~e~L~HP~f~~~ 361 (599)
....+. ....+++.+.+||.+||. ||.+|++ ++|+|+||||++.
T Consensus 256 ----------~~~~~~-~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h~~~~~~ 302 (364)
T cd05599 256 ----------ETLQFP-DEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSHPFFKGV 302 (364)
T ss_pred ----------CccCCC-CCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcCCCcCCC
Confidence 000000 012468899999999997 9999998 9999999999875
No 70
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00 E-value=3.4e-46 Score=367.98 Aligned_cols=271 Identities=31% Similarity=0.472 Sum_probs=222.7
Q ss_pred CCCcccccccCCCCceEEE-EEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhc-CCCCcccc
Q 007541 10 SADVDFFTEYGEGSRYKIE-EVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLL-RHPDIVEI 87 (599)
Q Consensus 10 ~~~~~~~~~~~~~~rY~i~-~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l-~HpnIv~l 87 (599)
..+++| .++.+.+.|.|- ++||-|-.|.|..|.++.||+++|+|++.. ..+..||+.+-... .|||||.+
T Consensus 49 ~~~m~~-k~~~itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~D-------s~KARrEVeLHw~~s~h~~iV~I 120 (400)
T KOG0604|consen 49 ESDMDF-KEYSITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLD-------SPKARREVELHWMASGHPHIVSI 120 (400)
T ss_pred hhhcch-hcccchhhheehhhhhccccCCceEEEEeccchhhhHHHHHhc-------CHHHHhHhhhhhhhcCCCceEEe
Confidence 456777 788999999885 789999999999999999999999998753 33455899884444 59999999
Q ss_pred ceeecCCCcCCCccEEEEEecCC-cCHHHHHHhCCC--CCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCC---
Q 007541 88 KHILLPPSRREFKDIYVVFELME-SDLHQVIKANDD--LTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANA--- 161 (599)
Q Consensus 88 ~~v~~~~s~~~~~~iylV~E~~~-g~L~~~i~~~~~--lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~--- 161 (599)
+++|... ..+...+.+|||.|+ |+|+..|+..+. ++|.++..|++||..||.|||+.+|.||||||+|+|...
T Consensus 121 idVyeNs-~~~rkcLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t~~ 199 (400)
T KOG0604|consen 121 IDVYENS-YQGRKCLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTTSP 199 (400)
T ss_pred ehhhhhh-ccCceeeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhheeeecCCC
Confidence 9999643 356678999999999 599999998775 999999999999999999999999999999999999875
Q ss_pred CCceeeeccCccccccCCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhh---
Q 007541 162 DCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVH--- 238 (599)
Q Consensus 162 ~~~lKL~DFGlA~~~~~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~--- 238 (599)
|+.+||+|||+|+.... ...+.+.|.|++|.|||+++. .+|+..+|+||+|||+|.||||.+||.......
T Consensus 200 na~lKLtDfGFAK~t~~----~~~L~TPc~TPyYvaPevlg~--eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aisp 273 (400)
T KOG0604|consen 200 NAPLKLTDFGFAKETQE----PGDLMTPCFTPYYVAPEVLGP--EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISP 273 (400)
T ss_pred CcceEecccccccccCC----CccccCCcccccccCHHHhCc--hhcCCCCCccchhHHHHHhhcCCCcccccCCccCCh
Confidence 57799999999986432 223456799999999999988 789999999999999999999999997654321
Q ss_pred -HHHHHHHhcCCCCHHHHHHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCC
Q 007541 239 -QLDIMTDLLGTPSPEAIARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKP 317 (599)
Q Consensus 239 -~l~~I~~~lG~p~~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (599)
.-.+|..---.
T Consensus 274 gMk~rI~~gqy~-------------------------------------------------------------------- 285 (400)
T KOG0604|consen 274 GMKRRIRTGQYE-------------------------------------------------------------------- 285 (400)
T ss_pred hHHhHhhccCcc--------------------------------------------------------------------
Confidence 11111111111
Q ss_pred CCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccccCcccC
Q 007541 318 IPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKV 364 (599)
Q Consensus 318 ~~~~~~~~~~s~~a~dLL~~mL~~DP~~RpTa~e~L~HP~f~~~~~~ 364 (599)
.-..-|..+|++++|||++||..+|.+|+|++|+++|||+.+....
T Consensus 286 -FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~hpwi~~~~~v 331 (400)
T KOG0604|consen 286 -FPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDHPWINQYEAV 331 (400)
T ss_pred -CCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcCchhcccccC
Confidence 1122344578899999999999999999999999999999986544
No 71
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=6.1e-45 Score=383.12 Aligned_cols=261 Identities=25% Similarity=0.472 Sum_probs=218.0
Q ss_pred CceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCccc-ChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCcc
Q 007541 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFE-HVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKD 101 (599)
Q Consensus 23 ~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~-~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~ 101 (599)
++|++++.||+|+||.||+|++..+++.||||+++.... .......+.+|+.+|+.++||||+++++++. +...
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~-----~~~~ 75 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQ-----DDEY 75 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEE-----cCCE
Confidence 479999999999999999999999999999999975322 2234556889999999999999999999984 3457
Q ss_pred EEEEEecCC-cCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCCC
Q 007541 102 IYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT 180 (599)
Q Consensus 102 iylV~E~~~-g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~ 180 (599)
+||||||++ ++|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++....
T Consensus 76 ~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~-- 153 (333)
T cd05600 76 LYLAMEYVPGGDFRTLLNNLGVLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLIDASGHIKLTDFGLSKGIVT-- 153 (333)
T ss_pred EEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEEEeCcCCccccc--
Confidence 999999998 69999999888899999999999999999999999999999999999999999999999999976533
Q ss_pred CCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHhh
Q 007541 181 PTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVCL 260 (599)
Q Consensus 181 ~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~~ 260 (599)
.....+||+.|+|||++.+ ..++.++||||||||+|+|++|+.||.+.+..+.+..+......
T Consensus 154 ----~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~----------- 216 (333)
T cd05600 154 ----YANSVVGSPDYMAPEVLRG--KGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKET----------- 216 (333)
T ss_pred ----ccCCcccCccccChhHhcC--CCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhcccc-----------
Confidence 1245679999999999877 58999999999999999999999999887765544433211000
Q ss_pred hhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHhcc
Q 007541 261 LLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLA 340 (599)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL~ 340 (599)
+. .+ ........+++.+.+||.+||.
T Consensus 217 ---------------------------------------------------~~--~~-~~~~~~~~~s~~~~~li~~~l~ 242 (333)
T cd05600 217 ---------------------------------------------------LQ--RP-VYDDPRFNLSDEAWDLITKLIN 242 (333)
T ss_pred ---------------------------------------------------cc--CC-CCCccccccCHHHHHHHHHHhh
Confidence 00 00 0011113568899999999999
Q ss_pred cCCCCCCCHHHHhcCccccCc
Q 007541 341 FEPKDRPTAEEALADPYFKGL 361 (599)
Q Consensus 341 ~DP~~RpTa~e~L~HP~f~~~ 361 (599)
.+|.+|+|++|+++||||.++
T Consensus 243 ~~~~rr~s~~~ll~h~~~~~~ 263 (333)
T cd05600 243 DPSRRFGSLEDIKNHPFFKEV 263 (333)
T ss_pred ChhhhcCCHHHHHhCcccCCC
Confidence 999999999999999999975
No 72
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=5e-45 Score=391.25 Aligned_cols=262 Identities=24% Similarity=0.376 Sum_probs=212.7
Q ss_pred CceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCccc-ChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCcc
Q 007541 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFE-HVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKD 101 (599)
Q Consensus 23 ~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~-~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~ 101 (599)
++|+++++||+|+||+||+|+++.+++.||||++..... .......+.+|+.+|+.++|+||+++++++.. ...
T Consensus 1 ~~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~-----~~~ 75 (382)
T cd05625 1 SMFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQD-----KDN 75 (382)
T ss_pred CCcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEe-----CCE
Confidence 469999999999999999999999999999999874321 22345678899999999999999999999953 357
Q ss_pred EEEEEecCC-cCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCCC
Q 007541 102 IYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT 180 (599)
Q Consensus 102 iylV~E~~~-g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~ 180 (599)
+|+|||||. |+|.+++...+.+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||+|+......
T Consensus 76 ~~lv~E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~ 155 (382)
T cd05625 76 LYFVMDYIPGGDMMSLLIRMGIFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTH 155 (382)
T ss_pred EEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEeECCCCccccccc
Confidence 999999998 5999999888889999999999999999999999999999999999999999999999999975321000
Q ss_pred C--------------------------------------------CcccccccccCccccCccccccccCCCCcchhhHh
Q 007541 181 P--------------------------------------------TAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWS 216 (599)
Q Consensus 181 ~--------------------------------------------~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWS 216 (599)
. ........+||+.|+|||++.+ ..|+.++||||
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~~~~~~DiwS 233 (382)
T cd05625 156 DSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLR--TGYTQLCDWWS 233 (382)
T ss_pred cccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcC--CCCCCeeeEEe
Confidence 0 0000123579999999999976 68999999999
Q ss_pred HHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHH
Q 007541 217 IGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLIL 296 (599)
Q Consensus 217 lG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (599)
||||+|+|++|++||.+.+.......+.....
T Consensus 234 lGvil~elltG~~Pf~~~~~~~~~~~i~~~~~------------------------------------------------ 265 (382)
T cd05625 234 VGVILYEMLVGQPPFLAQTPLETQMKVINWQT------------------------------------------------ 265 (382)
T ss_pred chHHHHHHHhCCCCCCCCCHHHHHHHHHccCC------------------------------------------------
Confidence 99999999999999988765443333321000
Q ss_pred hhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCC---HHHHhcCccccCc
Q 007541 297 HCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPT---AEEALADPYFKGL 361 (599)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL~~DP~~RpT---a~e~L~HP~f~~~ 361 (599)
...+ ......++.+.+||.+|+. ||.+|++ ++|+++||||+++
T Consensus 266 --------------------~~~~-p~~~~~s~~~~~li~~l~~-~p~~R~~~~~~~ei~~hp~f~~~ 311 (382)
T cd05625 266 --------------------SLHI-PPQAKLSPEASDLIIKLCR-GPEDRLGKNGADEIKAHPFFKTI 311 (382)
T ss_pred --------------------CcCC-CCcccCCHHHHHHHHHHcc-CHhHcCCCCCHHHHhcCCCcCCc
Confidence 0000 0123578899999999875 9999997 9999999999875
No 73
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=3.4e-46 Score=379.29 Aligned_cols=256 Identities=29% Similarity=0.518 Sum_probs=223.3
Q ss_pred CCCCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCc-ccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCC
Q 007541 20 GEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDI-FEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRRE 98 (599)
Q Consensus 20 ~~~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~-~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~ 98 (599)
...-||++.+.||+|+||.|.+|++..+|+.||||.|++. .....+.-+|.|||.||..|+||||+.++++| ++
T Consensus 50 nlkHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVF-----EN 124 (668)
T KOG0611|consen 50 NLKHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVF-----EN 124 (668)
T ss_pred chhhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhh-----cC
Confidence 3456899999999999999999999999999999999753 34556778899999999999999999999999 44
Q ss_pred CccEEEEEecCC-cCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCcccccc
Q 007541 99 FKDIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAF 177 (599)
Q Consensus 99 ~~~iylV~E~~~-g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~ 177 (599)
...+.|||||.. |+|+++|...+.|++.+++.||+||+.|+.|||.++++|||||.+|||+|.||++||+||||+..+.
T Consensus 125 kdKIvivMEYaS~GeLYDYiSer~~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILLD~N~NiKIADFGLSNly~ 204 (668)
T KOG0611|consen 125 KDKIVIVMEYASGGELYDYISERGSLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILLDQNNNIKIADFGLSNLYA 204 (668)
T ss_pred CceEEEEEEecCCccHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhccceecccchhheeecCCCCeeeeccchhhhhc
Confidence 557999999998 7999999999999999999999999999999999999999999999999999999999999998764
Q ss_pred CCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHH
Q 007541 178 NDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIAR 257 (599)
Q Consensus 178 ~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~ 257 (599)
. ..+++++||++.|.+||++.+. ..-++.+|.||||++||.|+.|..||.|.+....+.+|..-.
T Consensus 205 ~----~kfLqTFCGSPLYASPEIvNG~-PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~lvrQIs~Ga---------- 269 (668)
T KOG0611|consen 205 D----KKFLQTFCGSPLYASPEIVNGT-PYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRLVRQISRGA---------- 269 (668)
T ss_pred c----ccHHHHhcCCcccCCccccCCC-CCCCCccchhhHHHHHHHHhhcccccCCchHHHHHHHhhccc----------
Confidence 3 3467889999999999999883 233678999999999999999999999988766555543210
Q ss_pred HhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHH
Q 007541 258 VCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLER 337 (599)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~ 337 (599)
..-|..+..|.-||+.
T Consensus 270 ----------------------------------------------------------------YrEP~~PSdA~gLIRw 285 (668)
T KOG0611|consen 270 ----------------------------------------------------------------YREPETPSDASGLIRW 285 (668)
T ss_pred ----------------------------------------------------------------ccCCCCCchHHHHHHH
Confidence 0113455678999999
Q ss_pred hcccCCCCCCCHHHHhcCcccc
Q 007541 338 MLAFEPKDRPTAEEALADPYFK 359 (599)
Q Consensus 338 mL~~DP~~RpTa~e~L~HP~f~ 359 (599)
||..||.+|.|++++-.|=|+.
T Consensus 286 mLmVNP~RRATieDiAsHWWvN 307 (668)
T KOG0611|consen 286 MLMVNPERRATIEDIASHWWVN 307 (668)
T ss_pred HHhcCcccchhHHHHhhhheee
Confidence 9999999999999999997765
No 74
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=8.2e-45 Score=389.74 Aligned_cols=263 Identities=23% Similarity=0.353 Sum_probs=211.8
Q ss_pred CceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcc-cChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCcc
Q 007541 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIF-EHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKD 101 (599)
Q Consensus 23 ~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~-~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~ 101 (599)
+.|++++.||+|+||+||+|+++.+++.||||++.... ........+.+|+.+|+.++|+||+++++++.. ...
T Consensus 1 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~-----~~~ 75 (381)
T cd05626 1 SMFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQD-----KDN 75 (381)
T ss_pred CCceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEec-----CCE
Confidence 36899999999999999999999999999999996532 233445678899999999999999999999953 357
Q ss_pred EEEEEecCC-cCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCCC
Q 007541 102 IYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT 180 (599)
Q Consensus 102 iylV~E~~~-g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~ 180 (599)
+|+||||+. ++|.+++...+.+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||+++......
T Consensus 76 ~~lv~E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~ 155 (381)
T cd05626 76 LYFVMDYIPGGDMMSLLIRMEVFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTH 155 (381)
T ss_pred EEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEECCCCCEEEeeCcCCccccccc
Confidence 999999998 6999999988889999999999999999999999999999999999999999999999999975321000
Q ss_pred C--------------------------------------------CcccccccccCccccCccccccccCCCCcchhhHh
Q 007541 181 P--------------------------------------------TAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWS 216 (599)
Q Consensus 181 ~--------------------------------------------~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWS 216 (599)
. ........+||+.|+|||++.+ ..|+.++||||
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~~~~~~DiwS 233 (381)
T cd05626 156 NSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLR--KGYTQLCDWWS 233 (381)
T ss_pred ccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcC--CCCCCccceee
Confidence 0 0000124579999999999876 67899999999
Q ss_pred HHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHH
Q 007541 217 IGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLIL 296 (599)
Q Consensus 217 lG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (599)
||||+|+|++|+.||.+.+..+....+....+.
T Consensus 234 lG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~----------------------------------------------- 266 (381)
T cd05626 234 VGVILFEMLVGQPPFLAPTPTETQLKVINWENT----------------------------------------------- 266 (381)
T ss_pred hhhHHHHHHhCCCCCcCCCHHHHHHHHHccccc-----------------------------------------------
Confidence 999999999999999877654433333210000
Q ss_pred hhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHhcccC--CCCCCCHHHHhcCccccCc
Q 007541 297 HCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFE--PKDRPTAEEALADPYFKGL 361 (599)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL~~D--P~~RpTa~e~L~HP~f~~~ 361 (599)
..+ .....+++++.+||.+||..+ |..|+|++|+|+||||+++
T Consensus 267 ---------------------~~~-~~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~hp~f~~~ 311 (381)
T cd05626 267 ---------------------LHI-PPQVKLSPEAVDLITKLCCSAEERLGRNGADDIKAHPFFSEV 311 (381)
T ss_pred ---------------------cCC-CCCCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCcccCCC
Confidence 000 011246889999999977554 4459999999999999865
No 75
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=8.3e-45 Score=371.76 Aligned_cols=282 Identities=38% Similarity=0.615 Sum_probs=227.0
Q ss_pred ceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEE
Q 007541 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIY 103 (599)
Q Consensus 24 rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~iy 103 (599)
+|++.+.||+|+||.||+|++..+|+.||+|++............+.+|+.+++.++|+||+++++++.+ ...+|
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~-----~~~~~ 75 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHS-----DKKLT 75 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhcc-----CCceE
Confidence 6999999999999999999999999999999987533333333567789999999999999999999843 34799
Q ss_pred EEEecCCcCHHHHHHh-CCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCCCCC
Q 007541 104 VVFELMESDLHQVIKA-NDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPT 182 (599)
Q Consensus 104 lV~E~~~g~L~~~i~~-~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~~~ 182 (599)
+|+||++++|.+++.. .+.+++..++.++.||++||.|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 76 lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~- 154 (284)
T cd07839 76 LVFEYCDQDLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVR- 154 (284)
T ss_pred EEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEcCCCcEEECccchhhccCCCCC-
Confidence 9999999999998875 45799999999999999999999999999999999999999999999999999976432211
Q ss_pred cccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCC-CCCCChhhHHHHHHHhcCCCCHHHHHHHhhh
Q 007541 183 AIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPL-FPGKNVVHQLDIMTDLLGTPSPEAIARVCLL 261 (599)
Q Consensus 183 ~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~p-F~g~~~~~~l~~I~~~lG~p~~e~i~~~~~~ 261 (599)
......++..|+|||++.+. ..++.++||||+||++++|++|..| |.+.+...++..+.+.++.+....+......
T Consensus 155 --~~~~~~~~~~y~aPE~~~~~-~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (284)
T cd07839 155 --CYSAEVVTLWYRPPDVLFGA-KLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKL 231 (284)
T ss_pred --CcCCCccccCCcChHHHhCC-cccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhc
Confidence 12345678999999987652 4578999999999999999998755 6777888889999998988877665442111
Q ss_pred hhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHhccc
Q 007541 262 LNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAF 341 (599)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL~~ 341 (599)
... .. .........+.+..+..++.+.+||.+||+.
T Consensus 232 ~~~-----~~---------------------------------------~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~ 267 (284)
T cd07839 232 PDY-----KP---------------------------------------YPMYPATTSLVNVVPKLNSTGRDLLQNLLVC 267 (284)
T ss_pred ccc-----cc---------------------------------------cCCCCCcchhhhhcccCCHHHHHHHHHHhcC
Confidence 100 00 0000001112234466889999999999999
Q ss_pred CCCCCCCHHHHhcCccc
Q 007541 342 EPKDRPTAEEALADPYF 358 (599)
Q Consensus 342 DP~~RpTa~e~L~HP~f 358 (599)
||.+|||++|+|.||||
T Consensus 268 ~P~~R~t~~~il~h~~f 284 (284)
T cd07839 268 NPVQRISAEEALQHPYF 284 (284)
T ss_pred ChhhcCCHHHHhcCCCC
Confidence 99999999999999998
No 76
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=1.2e-44 Score=372.51 Aligned_cols=259 Identities=24% Similarity=0.362 Sum_probs=210.8
Q ss_pred ceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCccc-ChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccE
Q 007541 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFE-HVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDI 102 (599)
Q Consensus 24 rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~-~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~i 102 (599)
.|++.+.||+|+||.||+|.+..+|+.||+|++..... .......+.+|+.+|+.++|+||+++.+++.. ...+
T Consensus 1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~-----~~~~ 75 (285)
T cd05631 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYET-----KDAL 75 (285)
T ss_pred CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEcc-----CCeE
Confidence 38899999999999999999999999999999864322 22233467799999999999999999999843 3479
Q ss_pred EEEEecCC-cCHHHHHHhC--CCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCC
Q 007541 103 YVVFELME-SDLHQVIKAN--DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFND 179 (599)
Q Consensus 103 ylV~E~~~-g~L~~~i~~~--~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~ 179 (599)
|+||||+. ++|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 76 ~lv~e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~ 155 (285)
T cd05631 76 CLVLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILLDDRGHIRISDLGLAVQIPEG 155 (285)
T ss_pred EEEEEecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCC
Confidence 99999998 6898877543 36899999999999999999999999999999999999999999999999999764322
Q ss_pred CCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHh
Q 007541 180 TPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVC 259 (599)
Q Consensus 180 ~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~ 259 (599)
. .....+||..|+|||++.+ ..|+.++||||+||++|+|++|+.||.+.+.......+...+.
T Consensus 156 ~----~~~~~~g~~~y~aPE~~~~--~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~----------- 218 (285)
T cd05631 156 E----TVRGRVGTVGYMAPEVINN--EKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVK----------- 218 (285)
T ss_pred C----eecCCCCCCCccCHhhhcC--CCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhh-----------
Confidence 1 1234578999999999976 6899999999999999999999999987654322211111000
Q ss_pred hhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHhc
Q 007541 260 LLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERML 339 (599)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL 339 (599)
. .........++.+.+||++||
T Consensus 219 ------------------------------------------------------~----~~~~~~~~~s~~~~~li~~~l 240 (285)
T cd05631 219 ------------------------------------------------------E----DQEEYSEKFSEDAKSICRMLL 240 (285)
T ss_pred ------------------------------------------------------c----ccccCCccCCHHHHHHHHHHh
Confidence 0 001122357889999999999
Q ss_pred ccCCCCCCC-----HHHHhcCccccCcc
Q 007541 340 AFEPKDRPT-----AEEALADPYFKGLA 362 (599)
Q Consensus 340 ~~DP~~RpT-----a~e~L~HP~f~~~~ 362 (599)
+.||.+|+| ++++++||||.++.
T Consensus 241 ~~~P~~R~~~~~~~~~~~~~h~~~~~~~ 268 (285)
T cd05631 241 TKNPKERLGCRGNGAAGVKQHPIFKNIN 268 (285)
T ss_pred hcCHHHhcCCCCCCHHHHhcCHhhcCCC
Confidence 999999997 99999999998763
No 77
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=6.2e-45 Score=389.88 Aligned_cols=262 Identities=24% Similarity=0.394 Sum_probs=212.1
Q ss_pred CceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcc-cChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCcc
Q 007541 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIF-EHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKD 101 (599)
Q Consensus 23 ~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~-~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~ 101 (599)
++|.+++.||+|+||+||+|.++.+|+.||||++.... ........+.+|+.+|+.++||||+++++++.. ..+
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~-----~~~ 75 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQD-----AQY 75 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEc-----CCe
Confidence 47999999999999999999999999999999986422 122345678899999999999999999999843 357
Q ss_pred EEEEEecCC-cCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCCC
Q 007541 102 IYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT 180 (599)
Q Consensus 102 iylV~E~~~-g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~ 180 (599)
+||||||+. ++|.+++...+.+++..++.++.||+.||+|||+.||+||||||+|||++.++.+||+|||+|+......
T Consensus 76 ~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~ 155 (377)
T cd05629 76 LYLIMEFLPGGDLMTMLIKYDTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQH 155 (377)
T ss_pred eEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEEeeccccccccccc
Confidence 999999997 6999999888889999999999999999999999999999999999999999999999999996321100
Q ss_pred CC------------c--------------------------------ccccccccCccccCccccccccCCCCcchhhHh
Q 007541 181 PT------------A--------------------------------IFWTDYVATRWYRAPELCGSFFSKYTPAIDIWS 216 (599)
Q Consensus 181 ~~------------~--------------------------------~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWS 216 (599)
.. . ......+||+.|+|||++.+ ..|+.++||||
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwS 233 (377)
T cd05629 156 DSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQ--QGYGQECDWWS 233 (377)
T ss_pred ccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHcc--CCCCCceeeEe
Confidence 00 0 00013579999999999876 67999999999
Q ss_pred HHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHH
Q 007541 217 IGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLIL 296 (599)
Q Consensus 217 lG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (599)
||||+|+|++|.+||.+.+..+.+..|.....
T Consensus 234 lGvil~elltG~~Pf~~~~~~~~~~~i~~~~~------------------------------------------------ 265 (377)
T cd05629 234 LGAIMFECLIGWPPFCSENSHETYRKIINWRE------------------------------------------------ 265 (377)
T ss_pred cchhhhhhhcCCCCCCCCCHHHHHHHHHccCC------------------------------------------------
Confidence 99999999999999988776554444331000
Q ss_pred hhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCC---CCHHHHhcCccccCc
Q 007541 297 HCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDR---PTAEEALADPYFKGL 361 (599)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL~~DP~~R---pTa~e~L~HP~f~~~ 361 (599)
...+. .....+..+.+||.+||. +|.+| +|+.|+|+||||++.
T Consensus 266 --------------------~~~~p-~~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~hp~~~~~ 311 (377)
T cd05629 266 --------------------TLYFP-DDIHLSVEAEDLIRRLIT-NAENRLGRGGAHEIKSHPFFRGV 311 (377)
T ss_pred --------------------ccCCC-CCCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhcCCCcCCC
Confidence 00000 112467889999999998 77776 599999999999864
No 78
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=7.3e-45 Score=384.18 Aligned_cols=262 Identities=29% Similarity=0.474 Sum_probs=216.5
Q ss_pred CceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCccc-ChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCcc
Q 007541 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFE-HVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKD 101 (599)
Q Consensus 23 ~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~-~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~ 101 (599)
++|++++.||+|+||+||+|++..+|+.||||+++.... .......+.+|+.+|+.++|+||+++++++. +..+
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~-----~~~~ 75 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQ-----DEEH 75 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhhee-----cCCe
Confidence 479999999999999999999999999999999975322 2234566789999999999999999999884 3457
Q ss_pred EEEEEecCC-cCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCCC
Q 007541 102 IYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT 180 (599)
Q Consensus 102 iylV~E~~~-g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~ 180 (599)
+|+||||+. ++|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......
T Consensus 76 ~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~ 155 (350)
T cd05573 76 LYLVMEYMPGGDLMNLLIRKDVFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAK 155 (350)
T ss_pred EEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEeecCCCCccCcccC
Confidence 999999998 6999999888889999999999999999999999999999999999999999999999999997654322
Q ss_pred C--------------------------CcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCC
Q 007541 181 P--------------------------TAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGK 234 (599)
Q Consensus 181 ~--------------------------~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~ 234 (599)
. ........+||+.|+|||++.+ ..++.++||||||||+|+|++|+.||.+.
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwSlG~il~ell~g~~Pf~~~ 233 (350)
T cd05573 156 DREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRG--TPYGLECDWWSLGVILYEMLYGFPPFYSD 233 (350)
T ss_pred cccccccccccccccccccccccccccccccccccccCccccCHHHHcC--CCCCCceeeEecchhhhhhccCCCCCCCC
Confidence 0 0011234679999999999977 68999999999999999999999999887
Q ss_pred ChhhHHHHHHHhcCCCCHHHHHHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhccc
Q 007541 235 NVVHQLDIMTDLLGTPSPEAIARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRK 314 (599)
Q Consensus 235 ~~~~~l~~I~~~lG~p~~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (599)
+.......|......
T Consensus 234 ~~~~~~~~i~~~~~~----------------------------------------------------------------- 248 (350)
T cd05573 234 TLQETYNKIINWKES----------------------------------------------------------------- 248 (350)
T ss_pred CHHHHHHHHhccCCc-----------------------------------------------------------------
Confidence 754444333221000
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCC-HHHHhcCccccCc
Q 007541 315 KKPIPFSQKFPNANPLALRLLERMLAFEPKDRPT-AEEALADPYFKGL 361 (599)
Q Consensus 315 ~~~~~~~~~~~~~s~~a~dLL~~mL~~DP~~RpT-a~e~L~HP~f~~~ 361 (599)
... .....+++.+.+||.+||. ||.+|++ ++|+|+||||+++
T Consensus 249 -~~~---p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~hp~~~~~ 291 (350)
T cd05573 249 -LRF---PPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSHPFFKGI 291 (350)
T ss_pred -ccC---CCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcCCCcCCC
Confidence 000 0112368899999999998 9999999 9999999999875
No 79
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-44 Score=376.73 Aligned_cols=260 Identities=28% Similarity=0.483 Sum_probs=226.7
Q ss_pred CCCCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCC
Q 007541 20 GEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREF 99 (599)
Q Consensus 20 ~~~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~ 99 (599)
-+++-|.+.+.||+|.|.+|.+|+|.-||+.||||+|.+..........++.|++.|+.++|||||+|++++- ..
T Consensus 15 kIAGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViD-----TQ 89 (864)
T KOG4717|consen 15 KIAGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVID-----TQ 89 (864)
T ss_pred ceeeeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhc-----cc
Confidence 4578899999999999999999999999999999999876555555667889999999999999999999983 34
Q ss_pred ccEEEEEecCC-cCHHHHHHhC-CCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEe-CCCCceeeeccCccccc
Q 007541 100 KDIYVVFELME-SDLHQVIKAN-DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILA-NADCKLKICDFGLARVA 176 (599)
Q Consensus 100 ~~iylV~E~~~-g~L~~~i~~~-~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv-~~~~~lKL~DFGlA~~~ 176 (599)
..+|||+|+-+ |+|+++|-.+ .++.|+.++.||+||+.|+.|||...+|||||||+|+.+ ..-|-|||+|||++..+
T Consensus 90 TKlyLiLELGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf 169 (864)
T KOG4717|consen 90 TKLYLILELGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKF 169 (864)
T ss_pred ceEEEEEEecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEeeecCceEeeeccccccC
Confidence 57999999998 5999999765 489999999999999999999999999999999999864 55699999999999766
Q ss_pred cCCCCCcccccccccCccccCccccccccCCC-CcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHH
Q 007541 177 FNDTPTAIFWTDYVATRWYRAPELCGSFFSKY-TPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAI 255 (599)
Q Consensus 177 ~~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~y-s~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i 255 (599)
..+ ..++..||+..|-|||++++ ..| -+++||||||+|||-|+||++||...++.+.+.+|++.--+
T Consensus 170 ~PG----~kL~TsCGSLAYSAPEILLG--DsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLTmImDCKYt------ 237 (864)
T KOG4717|consen 170 QPG----KKLTTSCGSLAYSAPEILLG--DSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLTMIMDCKYT------ 237 (864)
T ss_pred CCc----chhhcccchhhccCchhhhc--CccCCcchhhhHHHHHHHHHHhCCCccccccchhhhhhhhccccc------
Confidence 443 34578899999999999987 555 46899999999999999999999999998888888652111
Q ss_pred HHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHH
Q 007541 256 ARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLL 335 (599)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL 335 (599)
....++.+++|||
T Consensus 238 -------------------------------------------------------------------vPshvS~eCrdLI 250 (864)
T KOG4717|consen 238 -------------------------------------------------------------------VPSHVSKECRDLI 250 (864)
T ss_pred -------------------------------------------------------------------CchhhhHHHHHHH
Confidence 1124678899999
Q ss_pred HHhcccCCCCCCCHHHHhcCccccCccc
Q 007541 336 ERMLAFEPKDRPTAEEALADPYFKGLAK 363 (599)
Q Consensus 336 ~~mL~~DP~~RpTa~e~L~HP~f~~~~~ 363 (599)
..||.-||++|.|.+|+..|+|++.+..
T Consensus 251 ~sMLvRdPkkRAslEeI~s~~Wlq~~D~ 278 (864)
T KOG4717|consen 251 QSMLVRDPKKRASLEEIVSTSWLQAGDR 278 (864)
T ss_pred HHHHhcCchhhccHHHHhccccccCCCC
Confidence 9999999999999999999999998754
No 80
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=9.4e-45 Score=383.75 Aligned_cols=255 Identities=23% Similarity=0.362 Sum_probs=214.2
Q ss_pred CCCceEEEEEEeecCceEEEEEEECCCC-cEEEEEEecCcc-cChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCC
Q 007541 21 EGSRYKIEEVIGKGSYGVVCSAYDTRTG-EKVAIKKINDIF-EHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRRE 98 (599)
Q Consensus 21 ~~~rY~i~~~LG~G~~g~V~~a~d~~tg-~~vAIK~i~~~~-~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~ 98 (599)
.-++|++.+.||+|+||.||+|.++.++ ..||+|++.... ........+.+|+.+|+.++||||+++++++..
T Consensus 28 ~~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~----- 102 (340)
T PTZ00426 28 KYEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKD----- 102 (340)
T ss_pred ChhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEe-----
Confidence 3568999999999999999999977665 789999986432 123345678899999999999999999999843
Q ss_pred CccEEEEEecCC-cCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCcccccc
Q 007541 99 FKDIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAF 177 (599)
Q Consensus 99 ~~~iylV~E~~~-g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~ 177 (599)
...+|+||||+. ++|.+++..++.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++...
T Consensus 103 ~~~~~lv~Ey~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~ 182 (340)
T PTZ00426 103 ESYLYLVLEFVIGGEFFTFLRRNKRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLDKDGFIKMTDFGFAKVVD 182 (340)
T ss_pred CCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEecCCCCeecC
Confidence 347999999997 6999999988899999999999999999999999999999999999999999999999999997653
Q ss_pred CCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHH
Q 007541 178 NDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIAR 257 (599)
Q Consensus 178 ~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~ 257 (599)
.. ....+||+.|+|||++.+ ..++.++||||+|||+|+|++|++||.+.+.......|....
T Consensus 183 ~~------~~~~~gt~~y~aPE~~~~--~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~---------- 244 (340)
T PTZ00426 183 TR------TYTLCGTPEYIAPEILLN--VGHGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQKILEGI---------- 244 (340)
T ss_pred CC------cceecCChhhcCHHHHhC--CCCCccccccchhhHHHHHhcCCCCCCCCCHHHHHHHHhcCC----------
Confidence 21 134579999999999876 678999999999999999999999998876544433332100
Q ss_pred HhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHH
Q 007541 258 VCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLER 337 (599)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~ 337 (599)
. ...+..++.+.+||++
T Consensus 245 ------------------------------------------------------------~---~~p~~~~~~~~~li~~ 261 (340)
T PTZ00426 245 ------------------------------------------------------------I---YFPKFLDNNCKHLMKK 261 (340)
T ss_pred ------------------------------------------------------------C---CCCCCCCHHHHHHHHH
Confidence 0 0113467889999999
Q ss_pred hcccCCCCCC-----CHHHHhcCccccCc
Q 007541 338 MLAFEPKDRP-----TAEEALADPYFKGL 361 (599)
Q Consensus 338 mL~~DP~~Rp-----Ta~e~L~HP~f~~~ 361 (599)
||+.||.+|+ |++++++||||+++
T Consensus 262 ~l~~dp~~R~~~~~~~~~~~~~hp~f~~~ 290 (340)
T PTZ00426 262 LLSHDLTKRYGNLKKGAQNVKEHPWFGNI 290 (340)
T ss_pred HcccCHHHcCCCCCCCHHHHHcCCCcCCC
Confidence 9999999996 89999999999875
No 81
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=3.9e-44 Score=372.39 Aligned_cols=296 Identities=41% Similarity=0.632 Sum_probs=235.8
Q ss_pred CCCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCc
Q 007541 21 EGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFK 100 (599)
Q Consensus 21 ~~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~ 100 (599)
..++|++.+.||.|+||+||+|.++.+|+.||+|+++...........+.+|+.+|+.++|+||+++++++... ...
T Consensus 5 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~---~~~ 81 (309)
T cd07845 5 SVTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGK---HLD 81 (309)
T ss_pred cccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecC---CCC
Confidence 45789999999999999999999999999999999875433333334566899999999999999999998543 224
Q ss_pred cEEEEEecCCcCHHHHHHhC-CCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCC
Q 007541 101 DIYVVFELMESDLHQVIKAN-DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFND 179 (599)
Q Consensus 101 ~iylV~E~~~g~L~~~i~~~-~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~ 179 (599)
.+|+||||++++|.+++... ..+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||++......
T Consensus 82 ~~~lv~e~~~~~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~ 161 (309)
T cd07845 82 SIFLVMEYCEQDLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLTDKGCLKIADFGLARTYGLP 161 (309)
T ss_pred eEEEEEecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccceeeecCCc
Confidence 68999999999999988763 57899999999999999999999999999999999999999999999999999865432
Q ss_pred CCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHh
Q 007541 180 TPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVC 259 (599)
Q Consensus 180 ~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~ 259 (599)
.. ..+...++..|+|||++.+. ..++.++||||+||++|+|++|+++|.+.+..+++..+...+|.+....+....
T Consensus 162 ~~---~~~~~~~~~~y~aPE~~~~~-~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (309)
T cd07845 162 AK---PMTPKVVTLWYRAPELLLGC-TTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFS 237 (309)
T ss_pred cC---CCCcccccccccChhhhcCC-CCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhhh
Confidence 21 12344568899999988652 568899999999999999999999999999999999999999988776544311
Q ss_pred hhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHhc
Q 007541 260 LLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERML 339 (599)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL 339 (599)
..... +. + .+.......+...+...++.+.+||.+||
T Consensus 238 ~~~~~------~~-----------------------------------~--~~~~~~~~~~~~~~~~~~~~~~~li~~ml 274 (309)
T cd07845 238 DLPLV------GK-----------------------------------F--TLPKQPYNNLKHKFPWLSEAGLRLLNFLL 274 (309)
T ss_pred ccccc------cc-----------------------------------c--cccCCCCCchHHhccccCHHHHHHHHHHh
Confidence 10000 00 0 00000001112223456888999999999
Q ss_pred ccCCCCCCCHHHHhcCccccCcccCCC
Q 007541 340 AFEPKDRPTAEEALADPYFKGLAKVER 366 (599)
Q Consensus 340 ~~DP~~RpTa~e~L~HP~f~~~~~~~~ 366 (599)
++||++|||++|+|+||||++...+.+
T Consensus 275 ~~dp~~R~t~~~il~h~~f~~~~~~~~ 301 (309)
T cd07845 275 MYDPKKRATAEEALESSYFKEKPLPCE 301 (309)
T ss_pred cCChhhCcCHHHHhcChhhccCCCCCC
Confidence 999999999999999999998766544
No 82
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=9.3e-45 Score=388.20 Aligned_cols=262 Identities=24% Similarity=0.370 Sum_probs=212.2
Q ss_pred CceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcc-cChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCcc
Q 007541 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIF-EHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKD 101 (599)
Q Consensus 23 ~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~-~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~ 101 (599)
++|++++.||+|+||+||+|++..+++.||||++.... ........+.+|+.+|+.++|+||+++++.+.. ...
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~-----~~~ 75 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQD-----KDN 75 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEc-----CCE
Confidence 47999999999999999999999999999999986422 122334567899999999999999999999843 357
Q ss_pred EEEEEecCC-cCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCCC
Q 007541 102 IYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT 180 (599)
Q Consensus 102 iylV~E~~~-g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~ 180 (599)
+|+||||+. ++|.+++...+.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+|.......
T Consensus 76 ~~lv~E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~ 155 (376)
T cd05598 76 LYFVMDYIPGGDMMSLLIRLGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTH 155 (376)
T ss_pred EEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEECCCCCEEEEeCCCCccccccc
Confidence 999999998 6999999988889999999999999999999999999999999999999999999999999985321000
Q ss_pred C----------------------------------------CcccccccccCccccCccccccccCCCCcchhhHhHHHH
Q 007541 181 P----------------------------------------TAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCI 220 (599)
Q Consensus 181 ~----------------------------------------~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~I 220 (599)
. ........+||+.|+|||++.+ ..++.++||||||||
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwSlGvi 233 (376)
T cd05598 156 DSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLR--TGYTQLCDWWSVGVI 233 (376)
T ss_pred cccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcC--CCCCcceeeeeccce
Confidence 0 0000123579999999999976 678999999999999
Q ss_pred HHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhc
Q 007541 221 FAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQV 300 (599)
Q Consensus 221 l~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (599)
+|+|++|+.||.+.+..+....+.....
T Consensus 234 lyell~G~~Pf~~~~~~~~~~~i~~~~~---------------------------------------------------- 261 (376)
T cd05598 234 LYEMLVGQPPFLADTPAETQLKVINWET---------------------------------------------------- 261 (376)
T ss_pred eeehhhCCCCCCCCCHHHHHHHHhccCc----------------------------------------------------
Confidence 9999999999988765443333221000
Q ss_pred ccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCC---CHHHHhcCccccCc
Q 007541 301 RNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRP---TAEEALADPYFKGL 361 (599)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL~~DP~~Rp---Ta~e~L~HP~f~~~ 361 (599)
...+ .....+++.+.+||.+|+. ||.+|+ |+.|+|+||||+++
T Consensus 262 ----------------~~~~-~~~~~~s~~~~~li~~l~~-~p~~R~~~~t~~ell~h~~~~~~ 307 (376)
T cd05598 262 ----------------TLHI-PSQAKLSREASDLILRLCC-GAEDRLGKNGADEIKAHPFFKGI 307 (376)
T ss_pred ----------------cccC-CCCCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhCCCCcCCC
Confidence 0000 1123578899999999874 999999 99999999999875
No 83
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=1.4e-44 Score=377.14 Aligned_cols=248 Identities=31% Similarity=0.487 Sum_probs=207.4
Q ss_pred EeecCceEEEEEEECCCCcEEEEEEecCcc-cChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEEEEEecC
Q 007541 31 IGKGSYGVVCSAYDTRTGEKVAIKKINDIF-EHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVVFELM 109 (599)
Q Consensus 31 LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~-~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~iylV~E~~ 109 (599)
||+|+||+||+|.+..+++.||||++.... ........+.+|+.+|+.++||||+++++++.. ...+|+||||+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-----~~~~~lv~e~~ 75 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQS-----PEKLYLVLAFI 75 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEec-----CCeEEEEEcCC
Confidence 699999999999999999999999986432 223345677899999999999999999998843 35799999999
Q ss_pred C-cCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCCCCCcccccc
Q 007541 110 E-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTD 188 (599)
Q Consensus 110 ~-g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~~~~~~~t~ 188 (599)
. ++|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++....... ....
T Consensus 76 ~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~---~~~~ 152 (312)
T cd05585 76 NGGELFHHLQREGRFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDD---KTNT 152 (312)
T ss_pred CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEECCCCcEEEEECcccccCccCCC---cccc
Confidence 8 69999998888899999999999999999999999999999999999999999999999999975422221 1245
Q ss_pred cccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHhhhhhhhhcC
Q 007541 189 YVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVCLLLNIIWCG 268 (599)
Q Consensus 189 ~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~~~~~~~~~~ 268 (599)
.+||+.|+|||++.+ ..++.++||||+||++|+|++|+.||.+.+....+..+..
T Consensus 153 ~~gt~~y~aPE~~~~--~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~----------------------- 207 (312)
T cd05585 153 FCGTPEYLAPELLLG--HGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKILQ----------------------- 207 (312)
T ss_pred ccCCcccCCHHHHcC--CCCCCccceechhHHHHHHHhCCCCcCCCCHHHHHHHHHc-----------------------
Confidence 679999999999877 6799999999999999999999999987665433322211
Q ss_pred CCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCC-
Q 007541 269 YDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRP- 347 (599)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL~~DP~~Rp- 347 (599)
.+. ......++.+.+||.+||..||.+||
T Consensus 208 -----------------------------------------------~~~---~~~~~~~~~~~~li~~~L~~dp~~R~~ 237 (312)
T cd05585 208 -----------------------------------------------EPL---RFPDGFDRDAKDLLIGLLSRDPTRRLG 237 (312)
T ss_pred -----------------------------------------------CCC---CCCCcCCHHHHHHHHHHcCCCHHHcCC
Confidence 000 11235678899999999999999997
Q ss_pred --CHHHHhcCccccCc
Q 007541 348 --TAEEALADPYFKGL 361 (599)
Q Consensus 348 --Ta~e~L~HP~f~~~ 361 (599)
++.|+|.||||...
T Consensus 238 ~~~~~e~l~hp~~~~~ 253 (312)
T cd05585 238 YNGAQEIKNHPFFSQL 253 (312)
T ss_pred CCCHHHHHcCCCcCCC
Confidence 58999999999864
No 84
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=4e-44 Score=372.77 Aligned_cols=288 Identities=33% Similarity=0.570 Sum_probs=215.1
Q ss_pred EEEEeecCceEEEEEEECC--CCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEEEE
Q 007541 28 EEVIGKGSYGVVCSAYDTR--TGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVV 105 (599)
Q Consensus 28 ~~~LG~G~~g~V~~a~d~~--tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~iylV 105 (599)
..+||+|+||+||+|.++. ++..||+|.+... .....+.+|+.+|+.++||||+++++++... ....+|+|
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~---~~~~~~lv 78 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGT----GISMSACREIALLRELKHPNVIALQKVFLSH---SDRKVWLL 78 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCC----CCcHHHHHHHHHHHhCCCCCeeeEEEEEecc---CCCeEEEE
Confidence 3679999999999999654 6689999998642 1223567899999999999999999998643 23478999
Q ss_pred EecCCcCHHHHHHhC---------CCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEe----CCCCceeeeccCc
Q 007541 106 FELMESDLHQVIKAN---------DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILA----NADCKLKICDFGL 172 (599)
Q Consensus 106 ~E~~~g~L~~~i~~~---------~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv----~~~~~lKL~DFGl 172 (599)
|||++++|.+++... ..+++..++.++.||+.||.|||+.||+||||||+|||+ +.++.+||+|||+
T Consensus 79 ~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~ 158 (317)
T cd07867 79 FDYAEHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGF 158 (317)
T ss_pred EeeeCCcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCCcEEEeeccc
Confidence 999999999988532 247899999999999999999999999999999999999 5668899999999
Q ss_pred cccccCCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCCh---------hhHHHHH
Q 007541 173 ARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNV---------VHQLDIM 243 (599)
Q Consensus 173 A~~~~~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~---------~~~l~~I 243 (599)
++...............++|..|+|||++.+. ..++.++||||+||++++|++|++||.+... ..++..+
T Consensus 159 a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~-~~~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~ 237 (317)
T cd07867 159 ARLFNSPLKPLADLDPVVVTFWYRAPELLLGA-RHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRI 237 (317)
T ss_pred eeccCCCcccccccCcceecccccCcHHhcCC-CccCcHHHHHhHHHHHHHHHhCCCCcccccccccccccccHHHHHHH
Confidence 98764332222223456789999999988652 4688999999999999999999999976542 4677888
Q ss_pred HHhcCCCCHHHHHHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCC
Q 007541 244 TDLLGTPSPEAIARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQK 323 (599)
Q Consensus 244 ~~~lG~p~~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (599)
...+|.+..+.|..+...... .... .... .....+..... .+...
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~--~~~~---------------------~~~~-~~~~~~~~~~~-----------~~~~~ 282 (317)
T cd07867 238 FSVMGFPADKDWEDIRKMPEY--PTLQ---------------------KDFR-RTTYANSSLIK-----------YMEKH 282 (317)
T ss_pred HHhcCCCChhhhhhhhhcccc--hhhh---------------------hhhc-ccccCCchhhh-----------hhhcc
Confidence 889998888776552211100 0000 0000 00000000000 01111
Q ss_pred CCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 007541 324 FPNANPLALRLLERMLAFEPKDRPTAEEALADPYF 358 (599)
Q Consensus 324 ~~~~s~~a~dLL~~mL~~DP~~RpTa~e~L~HP~f 358 (599)
....+..+.+||.+||+.||.+|||++|+|+||||
T Consensus 283 ~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~hp~f 317 (317)
T cd07867 283 KVKPDSKVFLLLQKLLTMDPTKRITSEQALQDPYF 317 (317)
T ss_pred cCCCChHHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence 12346779999999999999999999999999998
No 85
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=2.7e-44 Score=378.05 Aligned_cols=250 Identities=24% Similarity=0.448 Sum_probs=208.3
Q ss_pred EEEeecCceEEEEEEECCCCcEEEEEEecCccc-ChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEEEEEe
Q 007541 29 EVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFE-HVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVVFE 107 (599)
Q Consensus 29 ~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~-~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~iylV~E 107 (599)
++||+|+||.||+|.+..+|+.||||++..... .......+.+|+.+|+.++||||+++++++.. ...+|+|||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-----~~~~~lv~E 75 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQT-----KDRLCFVME 75 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEc-----CCEEEEEEe
Confidence 469999999999999999999999999975322 23345678899999999999999999998843 357999999
Q ss_pred cCC-cCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCCCCCcccc
Q 007541 108 LME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFW 186 (599)
Q Consensus 108 ~~~-g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~~~~~~~ 186 (599)
|+. ++|...+...+.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++....... ..
T Consensus 76 y~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~~---~~ 152 (328)
T cd05593 76 YVNGGELFFHLSRERVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAA---TM 152 (328)
T ss_pred CCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEECCCCcEEEecCcCCccCCCccc---cc
Confidence 998 58999998888899999999999999999999999999999999999999999999999999875322111 12
Q ss_pred cccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHhhhhhhhh
Q 007541 187 TDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVCLLLNIIW 266 (599)
Q Consensus 187 t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~~~~~~~~ 266 (599)
...+||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+.......+..
T Consensus 153 ~~~~gt~~y~aPE~~~~--~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~~~--------------------- 209 (328)
T cd05593 153 KTFCGTPEYLAPEVLED--NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILM--------------------- 209 (328)
T ss_pred ccccCCcCccChhhhcC--CCCCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHhcc---------------------
Confidence 34679999999999876 6789999999999999999999999987664433222210
Q ss_pred cCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCC
Q 007541 267 CGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDR 346 (599)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL~~DP~~R 346 (599)
... ......++.+.+||++||+.||.+|
T Consensus 210 -------------------------------------------------~~~---~~p~~~~~~~~~li~~~L~~dP~~R 237 (328)
T cd05593 210 -------------------------------------------------EDI---KFPRTLSADAKSLLSGLLIKDPNKR 237 (328)
T ss_pred -------------------------------------------------CCc---cCCCCCCHHHHHHHHHHcCCCHHHc
Confidence 000 1113467889999999999999999
Q ss_pred C-----CHHHHhcCccccCc
Q 007541 347 P-----TAEEALADPYFKGL 361 (599)
Q Consensus 347 p-----Ta~e~L~HP~f~~~ 361 (599)
+ ++.|+|+||||.+.
T Consensus 238 ~~~~~~~~~~il~h~~~~~~ 257 (328)
T cd05593 238 LGGGPDDAKEIMRHSFFTGV 257 (328)
T ss_pred CCCCCCCHHHHhcCCCcCCC
Confidence 7 89999999999864
No 86
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=3.8e-44 Score=376.00 Aligned_cols=250 Identities=25% Similarity=0.447 Sum_probs=208.4
Q ss_pred EEEeecCceEEEEEEECCCCcEEEEEEecCccc-ChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEEEEEe
Q 007541 29 EVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFE-HVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVVFE 107 (599)
Q Consensus 29 ~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~-~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~iylV~E 107 (599)
+.||+|+||.||+|.++.+|+.||+|++..... .......+.+|+.+|+.++||||+++++++.. ...+|+|||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~-----~~~~~lv~E 75 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQT-----HDRLCFVME 75 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEec-----CCEEEEEEe
Confidence 469999999999999999999999999975322 22345567789999999999999999999843 347999999
Q ss_pred cCC-cCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCCCCCcccc
Q 007541 108 LME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFW 186 (599)
Q Consensus 108 ~~~-g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~~~~~~~ 186 (599)
|++ ++|..++...+.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++....... ..
T Consensus 76 ~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~---~~ 152 (323)
T cd05595 76 YANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA---TM 152 (323)
T ss_pred CCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEcCCCCEEecccHHhccccCCCC---cc
Confidence 998 68999998888899999999999999999999999999999999999999999999999999875322111 12
Q ss_pred cccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHhhhhhhhh
Q 007541 187 TDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVCLLLNIIW 266 (599)
Q Consensus 187 t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~~~~~~~~ 266 (599)
...+||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+.......+...
T Consensus 153 ~~~~gt~~y~aPE~~~~--~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~-------------------- 210 (323)
T cd05595 153 KTFCGTPEYLAPEVLED--NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILME-------------------- 210 (323)
T ss_pred ccccCCcCcCCcccccC--CCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHhcC--------------------
Confidence 34679999999999876 67899999999999999999999999876654433322110
Q ss_pred cCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCC
Q 007541 267 CGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDR 346 (599)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL~~DP~~R 346 (599)
.. .....+++.+.+||.+||+.||.+|
T Consensus 211 --------------------------------------------------~~---~~p~~~~~~~~~li~~~L~~dP~~R 237 (323)
T cd05595 211 --------------------------------------------------EI---RFPRTLSPEAKSLLAGLLKKDPKQR 237 (323)
T ss_pred --------------------------------------------------CC---CCCCCCCHHHHHHHHHHccCCHHHh
Confidence 00 0113467889999999999999999
Q ss_pred C-----CHHHHhcCccccCc
Q 007541 347 P-----TAEEALADPYFKGL 361 (599)
Q Consensus 347 p-----Ta~e~L~HP~f~~~ 361 (599)
+ ++.++|+||||.+.
T Consensus 238 ~~~~~~~~~~~l~h~~~~~~ 257 (323)
T cd05595 238 LGGGPSDAKEVMEHRFFLSI 257 (323)
T ss_pred CCCCCCCHHHHHcCCCcCCC
Confidence 8 99999999999874
No 87
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=1.4e-43 Score=362.42 Aligned_cols=285 Identities=43% Similarity=0.736 Sum_probs=233.3
Q ss_pred ceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEE
Q 007541 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIY 103 (599)
Q Consensus 24 rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~iy 103 (599)
+|++.+.||.|++|.||+|.+..+|+.||+|++............+.+|+.+++.++|+||+++++++.. ...+|
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-----~~~~~ 75 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPH-----GSGFV 75 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEec-----CCeeE
Confidence 6999999999999999999999999999999987544333445678899999999999999999999854 35799
Q ss_pred EEEecCCcCHHHHHHh-CCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCCCCC
Q 007541 104 VVFELMESDLHQVIKA-NDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPT 182 (599)
Q Consensus 104 lV~E~~~g~L~~~i~~-~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~~~ 182 (599)
+|+||++++|.+++.. ...+++..++.++.||+.||.|||+.||+|+||||+||+++.++.++|+|||++........
T Consensus 76 ~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~- 154 (286)
T cd07832 76 LVMEYMPSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLISADGVLKIADFGLARLFSEEEP- 154 (286)
T ss_pred EEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEEcCCCcEEEeeeeecccccCCCC-
Confidence 9999998899999865 35789999999999999999999999999999999999999999999999999986543321
Q ss_pred cccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHhhhh
Q 007541 183 AIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVCLLL 262 (599)
Q Consensus 183 ~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~~~~ 262 (599)
.......++.+|+|||.+.+. ..++.++||||+||++++|++|.++|.+.+....+..+...++.+....+...+...
T Consensus 155 -~~~~~~~~~~~y~aPE~~~~~-~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (286)
T cd07832 155 -RLYSHQVATRWYRAPELLYGA-RKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLP 232 (286)
T ss_pred -CccccccCcccccCceeeecc-ccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcc
Confidence 112345789999999988652 457899999999999999999999999999999999999999988876654421100
Q ss_pred hhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHhcccC
Q 007541 263 NIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFE 342 (599)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL~~D 342 (599)
. |.. ..........+...+++.+..+.+||.+||..|
T Consensus 233 ~--~~~-----------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~ 269 (286)
T cd07832 233 D--YNK-----------------------------------------ITFPESKPIPLEEIFPDASPEALDLLKGLLVYD 269 (286)
T ss_pred h--hhc-----------------------------------------ccCCCCCcchHHHhCCCccHHHHHHHHHHhccC
Confidence 0 000 001111222233445677889999999999999
Q ss_pred CCCCCCHHHHhcCcccc
Q 007541 343 PKDRPTAEEALADPYFK 359 (599)
Q Consensus 343 P~~RpTa~e~L~HP~f~ 359 (599)
|.+|||++++|+||||.
T Consensus 270 p~~R~~~~~~l~h~~~~ 286 (286)
T cd07832 270 PSKRLSAAEALRHPYFT 286 (286)
T ss_pred hhhCCCHHHHhhCcCcC
Confidence 99999999999999984
No 88
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.4e-44 Score=372.15 Aligned_cols=300 Identities=29% Similarity=0.442 Sum_probs=230.1
Q ss_pred CCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcC-----C---CCccccceeecC
Q 007541 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLR-----H---PDIVEIKHILLP 93 (599)
Q Consensus 22 ~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~-----H---pnIv~l~~v~~~ 93 (599)
++||.++++||+|.|++||+|.|+.+.+.||+|+++. .+ ...+..+.||.+|+.++ | ..||+|++.|..
T Consensus 77 ~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKS-Aq--hYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~Fkh 153 (590)
T KOG1290|consen 77 GGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKS-AQ--HYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKH 153 (590)
T ss_pred CceEEEEEeccccccceeEEEeeccCCeEEEEEEEeh-hh--HHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeecccee
Confidence 4899999999999999999999999999999999873 22 23345678999999985 2 359999999976
Q ss_pred CCcCCCccEEEEEecCCcCHHHHHHhC--CCCCHHHHHHHHHHHHhhhhhcccC-ceEeecCCCCcEEeCCC--------
Q 007541 94 PSRREFKDIYVVFELMESDLHQVIKAN--DDLTPEHYQFFLYQLLRGLKYIHTA-NVFHRDLKPKNILANAD-------- 162 (599)
Q Consensus 94 ~s~~~~~~iylV~E~~~g~L~~~i~~~--~~lse~~i~~i~~QLl~aL~yLHs~-gIvHrDLKP~NILv~~~-------- 162 (599)
.+ .++.|+|||||+++.+|..+|+.. .+++...++.|++|||.||.|||.. ||||.||||+|||+..+
T Consensus 154 sG-pNG~HVCMVfEvLGdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPENvLl~~~e~~~~~~~ 232 (590)
T KOG1290|consen 154 SG-PNGQHVCMVFEVLGDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRECGIIHTDLKPENVLLCSTEIDPAKDA 232 (590)
T ss_pred cC-CCCcEEEEEehhhhhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhcCccccCCCcceeeeeccccchhhhh
Confidence 65 678899999999999999999865 4899999999999999999999986 89999999999996200
Q ss_pred --------------------------------------------------------------------------------
Q 007541 163 -------------------------------------------------------------------------------- 162 (599)
Q Consensus 163 -------------------------------------------------------------------------------- 162 (599)
T Consensus 233 ~~a~e~~~~~p~~s~s~~~t~~d~~~~~~~~~~s~~~~k~~~kk~~r~~~~~~~~l~~~~~~~~~~~~~s~n~~~~~n~~ 312 (590)
T KOG1290|consen 233 REAGEATTSLPKMSPSAVSTRPDALQRMAAEPMSKSKFKKMKKKLKRQAKKLEASLAGLEGIEEEPNQESYNNEPRINGN 312 (590)
T ss_pred hhhccccccCCCCCcccccccccccchhhccccchhhHHHHHHHHhhhhhhhhhhhcccccccccccccccccccCCCcc
Confidence
Q ss_pred ------------------------------------------------------------------------------Cc
Q 007541 163 ------------------------------------------------------------------------------CK 164 (599)
Q Consensus 163 ------------------------------------------------------------------------------~~ 164 (599)
.+
T Consensus 313 ~~~v~~~~~~~~~~~~~~~~n~~~k~~e~~~~~~~sl~~~~~~~~~t~~~~~~~s~~s~~~~~~n~~v~p~~~~~~~di~ 392 (590)
T KOG1290|consen 313 ESTVERSTLEEDSNENGNRENLPIKSPENFRGNNTSLPESQLRDSATPSDGSLSSPSSPGTIASNPLVNPDIPLPECDIR 392 (590)
T ss_pred ccchhhcccccccccccCCccccccCccccccccccccchhcccccccccccccCcCCccccccccccCCCCCCCcccee
Confidence 02
Q ss_pred eeeeccCccccccCCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCC------hhh
Q 007541 165 LKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKN------VVH 238 (599)
Q Consensus 165 lKL~DFGlA~~~~~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~------~~~ 238 (599)
+||+|||-|.-. ...+|.-+.|+.|||||++.+ ..|++.+||||++|++|||+||..||...+ +.+
T Consensus 393 vKIaDlGNACW~------~khFT~DIQTRQYRapEVllG--sgY~~~ADiWS~AC~~FELaTGDyLFePhsG~~Y~rDED 464 (590)
T KOG1290|consen 393 VKIADLGNACWV------HKHFTEDIQTRQYRAPEVLLG--SGYSTSADIWSTACMAFELATGDYLFEPHSGENYSRDED 464 (590)
T ss_pred EEEeeccchhhh------hhhhchhhhhhhccCcceeec--CCCCCchhHHHHHHHHHHhhcCceeecCCCCCCCCccHH
Confidence 566666655432 223466789999999999988 799999999999999999999999996443 678
Q ss_pred HHHHHHHhcCCCCHHHHHHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCC
Q 007541 239 QLDIMTDLLGTPSPEAIARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPI 318 (599)
Q Consensus 239 ~l~~I~~~lG~p~~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (599)
++.+|+++||..|...+.... ...+++++-+.-......-+--+.+++..++.+..+.+
T Consensus 465 HiA~i~ELLG~iPr~ia~~Gk--------~SRdFFnr~G~LrhI~~LK~WpL~~VL~eKY~~s~e~A------------- 523 (590)
T KOG1290|consen 465 HIALIMELLGKIPRKIALGGK--------YSRDFFNRRGELRHIRRLKPWPLYEVLIEKYEWSEEDA------------- 523 (590)
T ss_pred HHHHHHHHHhhccHHHHhcCc--------chHhhhccccceecccccCCCcHHHHHHHHhCCCHHHH-------------
Confidence 999999999999987665411 11112222211111111111112333333333333332
Q ss_pred CCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccccCcccC
Q 007541 319 PFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKV 364 (599)
Q Consensus 319 ~~~~~~~~~s~~a~dLL~~mL~~DP~~RpTa~e~L~HP~f~~~~~~ 364 (599)
.++.|||.-||+++|.+|+||.++|+|||+..+..+
T Consensus 524 ----------~~fsdFL~PmLef~PeKR~tA~~cl~hPwLn~~~~~ 559 (590)
T KOG1290|consen 524 ----------QQFSDFLSPMLEFDPEKRPTAAQCLKHPWLNPVAGP 559 (590)
T ss_pred ----------HHHHHHHHHHHhcCccccccHHHHhcCccccCCCCC
Confidence 346899999999999999999999999999987765
No 89
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=2.2e-43 Score=361.14 Aligned_cols=282 Identities=39% Similarity=0.643 Sum_probs=227.8
Q ss_pred ceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEE
Q 007541 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIY 103 (599)
Q Consensus 24 rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~iy 103 (599)
.|++++.||.|++|.||+|.++.+|+.||||++............+.+|+.+++.++||||+++++++. +...+|
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-----~~~~~~ 75 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH-----TENKLY 75 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcc-----cCCcEE
Confidence 489999999999999999999999999999998754333334457889999999999999999999984 335799
Q ss_pred EEEecCCcCHHHHHHh--CCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCCCC
Q 007541 104 VVFELMESDLHQVIKA--NDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTP 181 (599)
Q Consensus 104 lV~E~~~g~L~~~i~~--~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~~ 181 (599)
+||||+.++|..++.. ...+++..++.++.||+.||+|||+.|++|+||+|+||+++.++.+||+|||+++.......
T Consensus 76 ~v~e~~~~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~ 155 (284)
T cd07860 76 LVFEFLHQDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR 155 (284)
T ss_pred EEeeccccCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEeeccchhhcccCcc
Confidence 9999999999998865 34689999999999999999999999999999999999999999999999999976532211
Q ss_pred CcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHhhh
Q 007541 182 TAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVCLL 261 (599)
Q Consensus 182 ~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~~~ 261 (599)
......++.+|+|||++.+. ..++.++|||||||++++|++|+.||.+.+..+.+..+.+.+|.+....+.....
T Consensus 156 ---~~~~~~~~~~y~aPE~~~~~-~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 230 (284)
T cd07860 156 ---TYTHEVVTLWYRAPEILLGC-KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS- 230 (284)
T ss_pred ---ccccccccccccCCeEEecC-CCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhH-
Confidence 12334678899999987652 3468899999999999999999999999998888889999888887654432110
Q ss_pred hhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHhccc
Q 007541 262 LNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAF 341 (599)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL~~ 341 (599)
...+...+.......+....+.+++.+++||.+||+.
T Consensus 231 -------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~ 267 (284)
T cd07860 231 -------------------------------------------LPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHY 267 (284)
T ss_pred -------------------------------------------HHHHHhhcccccccCHHHHcccCCHHHHHHHHHhcCC
Confidence 0111111111112222333456788899999999999
Q ss_pred CCCCCCCHHHHhcCccc
Q 007541 342 EPKDRPTAEEALADPYF 358 (599)
Q Consensus 342 DP~~RpTa~e~L~HP~f 358 (599)
||.+|||++|+|.||||
T Consensus 268 ~P~~Rpt~~~~l~~~~f 284 (284)
T cd07860 268 DPNKRISAKAALAHPFF 284 (284)
T ss_pred CcccCCCHHHHhcCCCC
Confidence 99999999999999998
No 90
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=8.5e-44 Score=373.18 Aligned_cols=255 Identities=24% Similarity=0.411 Sum_probs=211.5
Q ss_pred ceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCccc-ChhhHHHHHHHHHHHHhcCCC-CccccceeecCCCcCCCcc
Q 007541 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFE-HVSDATRILREIKLLRLLRHP-DIVEIKHILLPPSRREFKD 101 (599)
Q Consensus 24 rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~-~~~~~~~i~rEi~iL~~l~Hp-nIv~l~~v~~~~s~~~~~~ 101 (599)
.|++++.||+|+||.||+|.+..+++.||||++..... .......+.+|+.++..+.|+ +|+.+++++.. ...
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~-----~~~ 75 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQT-----MDR 75 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEc-----CCE
Confidence 48999999999999999999999999999999975322 223456778899999999765 58888888743 347
Q ss_pred EEEEEecCC-cCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCCC
Q 007541 102 IYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT 180 (599)
Q Consensus 102 iylV~E~~~-g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~ 180 (599)
+|+||||+. ++|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++......
T Consensus 76 ~~lv~E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~ 155 (324)
T cd05587 76 LYFVMEYVNGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGG 155 (324)
T ss_pred EEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEcCCCCEEEeecCcceecCCCC
Confidence 999999998 6999999888889999999999999999999999999999999999999999999999999987532211
Q ss_pred CCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHhh
Q 007541 181 PTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVCL 260 (599)
Q Consensus 181 ~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~~ 260 (599)
. .....+||+.|+|||++.+ ..++.++||||+||++|+|++|+.||.+.+..+.+..|....
T Consensus 156 ~---~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~------------- 217 (324)
T cd05587 156 K---TTRTFCGTPDYIAPEIIAY--QPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIMEHN------------- 217 (324)
T ss_pred C---ceeeecCCccccChhhhcC--CCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcCC-------------
Confidence 1 1234579999999999876 678999999999999999999999998876555443332100
Q ss_pred hhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHhcc
Q 007541 261 LLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLA 340 (599)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL~ 340 (599)
. ......++.+.+||.+||.
T Consensus 218 ---------------------------------------------------------~---~~~~~~~~~~~~li~~~l~ 237 (324)
T cd05587 218 ---------------------------------------------------------V---SYPKSLSKEAVSICKGLLT 237 (324)
T ss_pred ---------------------------------------------------------C---CCCCCCCHHHHHHHHHHhh
Confidence 0 0112467889999999999
Q ss_pred cCCCCCCCH-----HHHhcCccccCc
Q 007541 341 FEPKDRPTA-----EEALADPYFKGL 361 (599)
Q Consensus 341 ~DP~~RpTa-----~e~L~HP~f~~~ 361 (599)
.||.+|++. +++++||||+..
T Consensus 238 ~~P~~R~~~~~~~~~~~~~hp~~~~~ 263 (324)
T cd05587 238 KHPAKRLGCGPTGERDIREHAFFRRI 263 (324)
T ss_pred cCHHHcCCCCCCCHHHHhcCCCcCCC
Confidence 999999986 899999999864
No 91
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=3.8e-44 Score=376.41 Aligned_cols=262 Identities=23% Similarity=0.396 Sum_probs=214.1
Q ss_pred CceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCccc-ChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCcc
Q 007541 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFE-HVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKD 101 (599)
Q Consensus 23 ~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~-~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~ 101 (599)
++|++.+.||+|+||+||+|.++.+|+.||||+++.... .......+.+|+.+++.++|+||+++++++.. ...
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~-----~~~ 75 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQD-----KDN 75 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEec-----CCe
Confidence 479999999999999999999999999999999975432 22344567789999999999999999998843 357
Q ss_pred EEEEEecCC-cCHHHHHHhC-CCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCC
Q 007541 102 IYVVFELME-SDLHQVIKAN-DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFND 179 (599)
Q Consensus 102 iylV~E~~~-g~L~~~i~~~-~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~ 179 (599)
+|+||||++ ++|.+++... +.+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||++......
T Consensus 76 ~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~ 155 (330)
T cd05601 76 LYLVMEYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLIDRTGHIKLADFGSAARLTAN 155 (330)
T ss_pred EEEEECCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEECCCCCEEeccCCCCeECCCC
Confidence 999999997 6999999876 67999999999999999999999999999999999999999999999999999865432
Q ss_pred CCCcccccccccCccccCccccccc----cCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHH
Q 007541 180 TPTAIFWTDYVATRWYRAPELCGSF----FSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAI 255 (599)
Q Consensus 180 ~~~~~~~t~~~gt~~Y~APE~l~~~----~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i 255 (599)
... .....++|+.|+|||++... ...++.++||||||||+|+|++|+.||.+.+....+..|....
T Consensus 156 ~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~-------- 225 (330)
T cd05601 156 KMV--NSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNFQ-------- 225 (330)
T ss_pred Cce--eeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHHHHHHHcCC--------
Confidence 211 12335789999999998531 1467899999999999999999999998776554443332110
Q ss_pred HHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHH
Q 007541 256 ARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLL 335 (599)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL 335 (599)
....+ ...+..++.+.+||
T Consensus 226 ------------------------------------------------------------~~~~~-~~~~~~~~~~~~li 244 (330)
T cd05601 226 ------------------------------------------------------------RFLKF-PEDPKVSSDFLDLI 244 (330)
T ss_pred ------------------------------------------------------------CccCC-CCCCCCCHHHHHHH
Confidence 00000 11235788999999
Q ss_pred HHhcccCCCCCCCHHHHhcCccccCc
Q 007541 336 ERMLAFEPKDRPTAEEALADPYFKGL 361 (599)
Q Consensus 336 ~~mL~~DP~~RpTa~e~L~HP~f~~~ 361 (599)
.+||+ ||.+|||++++++||||+.+
T Consensus 245 ~~ll~-~p~~R~t~~~l~~h~~~~~~ 269 (330)
T cd05601 245 QSLLC-GQKERLGYEGLCCHPFFSKI 269 (330)
T ss_pred HHHcc-ChhhCCCHHHHhCCCCcCCC
Confidence 99998 99999999999999999864
No 92
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=9.1e-44 Score=372.96 Aligned_cols=253 Identities=26% Similarity=0.435 Sum_probs=207.8
Q ss_pred eEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcc-cChhhHHHHHHHHHHH---HhcCCCCccccceeecCCCcCCCc
Q 007541 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIF-EHVSDATRILREIKLL---RLLRHPDIVEIKHILLPPSRREFK 100 (599)
Q Consensus 25 Y~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~-~~~~~~~~i~rEi~iL---~~l~HpnIv~l~~v~~~~s~~~~~ 100 (599)
|++++.||+|+||.||+|.+..+|+.||||+++... ......+.+.+|+.++ +.++||||+++++++.. ..
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~-----~~ 75 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQT-----ED 75 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEc-----CC
Confidence 789999999999999999999999999999997532 1223445677777765 45679999999999843 35
Q ss_pred cEEEEEecCC-cCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCC
Q 007541 101 DIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFND 179 (599)
Q Consensus 101 ~iylV~E~~~-g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~ 179 (599)
.+|+||||+. ++|...+.. +.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 76 ~~~lv~E~~~~~~L~~~~~~-~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~ 154 (324)
T cd05589 76 HVCFVMEYAAGGDLMMHIHT-DVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGF 154 (324)
T ss_pred EEEEEEcCCCCCcHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCcEEeCcccCCccCCCC
Confidence 7999999999 588887765 46999999999999999999999999999999999999999999999999998753221
Q ss_pred CCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHh
Q 007541 180 TPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVC 259 (599)
Q Consensus 180 ~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~ 259 (599)
.. .....+|++.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+..+.+..+....
T Consensus 155 ~~---~~~~~~g~~~y~aPE~~~~--~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~------------ 217 (324)
T cd05589 155 GD---RTSTFCGTPEFLAPEVLTE--TSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVNDE------------ 217 (324)
T ss_pred CC---cccccccCccccCHhHhcC--CCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC------------
Confidence 11 1235679999999999876 678999999999999999999999998876554443332100
Q ss_pred hhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHhc
Q 007541 260 LLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERML 339 (599)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL 339 (599)
. .....+++.+.+||.+||
T Consensus 218 ---------------------------------------------------------~----~~p~~~~~~~~~li~~~L 236 (324)
T cd05589 218 ---------------------------------------------------------V----RYPRFLSREAISIMRRLL 236 (324)
T ss_pred ---------------------------------------------------------C----CCCCCCCHHHHHHHHHHh
Confidence 0 011346788999999999
Q ss_pred ccCCCCCC-----CHHHHhcCccccCc
Q 007541 340 AFEPKDRP-----TAEEALADPYFKGL 361 (599)
Q Consensus 340 ~~DP~~Rp-----Ta~e~L~HP~f~~~ 361 (599)
+.||.+|| ++.++++||||+++
T Consensus 237 ~~dP~~R~~~~~~~~~~l~~~~~f~~~ 263 (324)
T cd05589 237 RRNPERRLGSGEKDAEDVKKQPFFRDI 263 (324)
T ss_pred hcCHhHcCCCCCCCHHHHhhCCCcCCC
Confidence 99999999 79999999999875
No 93
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=7.2e-44 Score=374.59 Aligned_cols=261 Identities=24% Similarity=0.401 Sum_probs=208.5
Q ss_pred ceEEEEEEeecCceEEEEEEEC---CCCcEEEEEEecCcc--cChhhHHHHHHHHHHHHhcC-CCCccccceeecCCCcC
Q 007541 24 RYKIEEVIGKGSYGVVCSAYDT---RTGEKVAIKKINDIF--EHVSDATRILREIKLLRLLR-HPDIVEIKHILLPPSRR 97 (599)
Q Consensus 24 rY~i~~~LG~G~~g~V~~a~d~---~tg~~vAIK~i~~~~--~~~~~~~~i~rEi~iL~~l~-HpnIv~l~~v~~~~s~~ 97 (599)
.|++++.||+|+||+||+|++. .+++.||+|++.+.. ........+.+|+.+|+.++ |+||+++++++..
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~---- 76 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQT---- 76 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEec----
Confidence 4899999999999999999864 578999999986422 12234456788999999995 9999999998843
Q ss_pred CCccEEEEEecCC-cCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccc
Q 007541 98 EFKDIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVA 176 (599)
Q Consensus 98 ~~~~iylV~E~~~-g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~ 176 (599)
...+|+||||+. ++|.+++.....+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++..
T Consensus 77 -~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~ 155 (332)
T cd05614 77 -EAKLHLILDYVSGGEMFTHLYQRDNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLDSEGHVVLTDFGLSKEF 155 (332)
T ss_pred -CCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEECCCCCEEEeeCcCCccc
Confidence 357999999999 599999988888999999999999999999999999999999999999999999999999999764
Q ss_pred cCCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHH
Q 007541 177 FNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIA 256 (599)
Q Consensus 177 ~~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~ 256 (599)
...... .....+||..|+|||++.+. ..++.++||||||||+|+|++|+.||...........+..
T Consensus 156 ~~~~~~--~~~~~~gt~~y~aPE~~~~~-~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~----------- 221 (332)
T cd05614 156 LSEEKE--RTYSFCGTIEYMAPEIIRGK-GGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSR----------- 221 (332)
T ss_pred cccCCC--ccccccCCccccCHHHhcCC-CCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHH-----------
Confidence 332221 12346799999999998652 4578899999999999999999999975432111111100
Q ss_pred HHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHH
Q 007541 257 RVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLE 336 (599)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~ 336 (599)
. +.... ......+++.+.+||.
T Consensus 222 --------------------------------------------------~----~~~~~----~~~~~~~~~~~~~li~ 243 (332)
T cd05614 222 --------------------------------------------------R----ILKCD----PPFPSFIGPEAQDLLH 243 (332)
T ss_pred --------------------------------------------------H----HhcCC----CCCCCCCCHHHHHHHH
Confidence 0 00000 0112347889999999
Q ss_pred HhcccCCCCCC-----CHHHHhcCccccCc
Q 007541 337 RMLAFEPKDRP-----TAEEALADPYFKGL 361 (599)
Q Consensus 337 ~mL~~DP~~Rp-----Ta~e~L~HP~f~~~ 361 (599)
+||+.||++|+ +++++|+||||++.
T Consensus 244 ~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~ 273 (332)
T cd05614 244 KLLRKDPKKRLGAGPQGASEIKEHPFFKGL 273 (332)
T ss_pred HHcCCCHHHcCCCCCCCHHHHHcCCCcCCC
Confidence 99999999999 89999999999864
No 94
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=5.9e-44 Score=374.07 Aligned_cols=250 Identities=24% Similarity=0.413 Sum_probs=208.0
Q ss_pred EEEeecCceEEEEEEECCCCcEEEEEEecCcc-cChhhHHHHHHHHHHHHhc-CCCCccccceeecCCCcCCCccEEEEE
Q 007541 29 EVIGKGSYGVVCSAYDTRTGEKVAIKKINDIF-EHVSDATRILREIKLLRLL-RHPDIVEIKHILLPPSRREFKDIYVVF 106 (599)
Q Consensus 29 ~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~-~~~~~~~~i~rEi~iL~~l-~HpnIv~l~~v~~~~s~~~~~~iylV~ 106 (599)
+.||+|+||+||+|.++.+++.||||++.+.. ........+.+|+.++..+ +||||+++++++.. ...+|+||
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~-----~~~~~iv~ 75 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQT-----PDRLFFVM 75 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEc-----CCEEEEEE
Confidence 46999999999999999999999999987532 1223455677899988876 69999999999843 34799999
Q ss_pred ecCC-cCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCCCCCccc
Q 007541 107 ELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIF 185 (599)
Q Consensus 107 E~~~-g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~~~~~~ 185 (599)
||+. ++|.+++.....+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++....... .
T Consensus 76 Ey~~~g~L~~~i~~~~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~---~ 152 (320)
T cd05590 76 EFVNGGDLMFHIQKSRRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGK---T 152 (320)
T ss_pred cCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCC---c
Confidence 9998 59999998888899999999999999999999999999999999999999999999999999875322111 1
Q ss_pred ccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHhhhhhhh
Q 007541 186 WTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVCLLLNII 265 (599)
Q Consensus 186 ~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~~~~~~~ 265 (599)
....+||+.|+|||++.+ ..++.++||||+||++|+|++|+.||.+.+....+..|....
T Consensus 153 ~~~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~------------------ 212 (320)
T cd05590 153 TSTFCGTPDYIAPEILQE--MLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDE------------------ 212 (320)
T ss_pred ccccccCccccCHHHHcC--CCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCC------------------
Confidence 234578999999999876 678999999999999999999999998877655444332100
Q ss_pred hcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCC
Q 007541 266 WCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKD 345 (599)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL~~DP~~ 345 (599)
. ......++.+.+||++||+.||.+
T Consensus 213 ----------------------------------------------------~---~~~~~~~~~~~~li~~~L~~dP~~ 237 (320)
T cd05590 213 ----------------------------------------------------V---VYPTWLSQDAVDILKAFMTKNPTM 237 (320)
T ss_pred ----------------------------------------------------C---CCCCCCCHHHHHHHHHHcccCHHH
Confidence 0 011246788999999999999999
Q ss_pred CCCH------HHHhcCccccCc
Q 007541 346 RPTA------EEALADPYFKGL 361 (599)
Q Consensus 346 RpTa------~e~L~HP~f~~~ 361 (599)
|+++ +++++||||.++
T Consensus 238 R~~~~~~~~~~~~~~h~~f~~~ 259 (320)
T cd05590 238 RLGSLTLGGEEAILRHPFFKEL 259 (320)
T ss_pred CCCCCCCCCHHHHHcCCCcCCC
Confidence 9998 999999999875
No 95
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=2.8e-43 Score=363.23 Aligned_cols=288 Identities=42% Similarity=0.673 Sum_probs=234.0
Q ss_pred ceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccC---hhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCc
Q 007541 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEH---VSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFK 100 (599)
Q Consensus 24 rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~---~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~ 100 (599)
+|++.+.||.|++|.||+|.+..+|+.||||++...... ......+.+|+.+++.++|+||+++++++.. ..
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-----~~ 75 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGH-----KS 75 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeec-----CC
Confidence 689999999999999999999999999999999754322 2233456789999999999999999999854 35
Q ss_pred cEEEEEecCCcCHHHHHHhCC-CCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCC
Q 007541 101 DIYVVFELMESDLHQVIKAND-DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFND 179 (599)
Q Consensus 101 ~iylV~E~~~g~L~~~i~~~~-~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~ 179 (599)
.+|+||||+.++|.+++.... .+++..+..++.||++||.|||++||+|+||||+|||++.++.+||+|||+++.....
T Consensus 76 ~~~lv~e~~~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~ 155 (298)
T cd07841 76 NINLVFEFMETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIASDGVLKLADFGLARSFGSP 155 (298)
T ss_pred EEEEEEcccCCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEEcCCCCEEEccceeeeeccCC
Confidence 799999999889999998776 7999999999999999999999999999999999999999999999999999875432
Q ss_pred CCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHh
Q 007541 180 TPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVC 259 (599)
Q Consensus 180 ~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~ 259 (599)
.. ......++..|+|||.+.+. ..++.++||||+||++++|++|.++|.+.+..+.+..+...++.+....+....
T Consensus 156 ~~---~~~~~~~~~~y~aPE~~~~~-~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (298)
T cd07841 156 NR---KMTHQVVTRWYRAPELLFGA-RHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVT 231 (298)
T ss_pred Cc---cccccccceeeeCHHHHhCC-CCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhcc
Confidence 21 12334568899999987542 467899999999999999999999999998888888888888887766544311
Q ss_pred hhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHhc
Q 007541 260 LLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERML 339 (599)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL 339 (599)
.... + .........+....+...+..+.+||.+||
T Consensus 232 ~~~~--------------------------------------------~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l 266 (298)
T cd07841 232 SLPD--------------------------------------------Y-VEFKPFPPTPLKQIFPAASDDALDLLQRLL 266 (298)
T ss_pred cccc--------------------------------------------c-ccccccCCcchhhhcccccHHHHHHHHHHh
Confidence 0000 0 000111222333445667889999999999
Q ss_pred ccCCCCCCCHHHHhcCccccCcccCC
Q 007541 340 AFEPKDRPTAEEALADPYFKGLAKVE 365 (599)
Q Consensus 340 ~~DP~~RpTa~e~L~HP~f~~~~~~~ 365 (599)
++||++|||+.|+|+||||++...+.
T Consensus 267 ~~~P~~R~s~~e~l~~~~~~~~~~~~ 292 (298)
T cd07841 267 TLNPNKRITARQALEHPYFSNDPAPT 292 (298)
T ss_pred cCCcccCcCHHHHhhCccccCCCCCC
Confidence 99999999999999999999876543
No 96
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=4e-44 Score=375.79 Aligned_cols=250 Identities=26% Similarity=0.456 Sum_probs=207.6
Q ss_pred EEEeecCceEEEEEEECCCCcEEEEEEecCccc-ChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEEEEEe
Q 007541 29 EVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFE-HVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVVFE 107 (599)
Q Consensus 29 ~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~-~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~iylV~E 107 (599)
+.||+|+||+||+|.+..+|+.||+|++..... .......+.+|+.+++.++||||+++.+++.. ...+|+|||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~-----~~~~~lv~E 75 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQT-----HDRLCFVME 75 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEc-----CCEEEEEEe
Confidence 469999999999999999999999999975322 22345567789999999999999999998843 357999999
Q ss_pred cCC-cCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhccc-CceEeecCCCCcEEeCCCCceeeeccCccccccCCCCCccc
Q 007541 108 LME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHT-ANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIF 185 (599)
Q Consensus 108 ~~~-g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs-~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~~~~~~ 185 (599)
|++ ++|..++...+.+++..++.++.||+.||.|||+ .||+||||||+|||++.++.+||+|||+++....... .
T Consensus 76 ~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~---~ 152 (325)
T cd05594 76 YANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA---T 152 (325)
T ss_pred CCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEECCCCCEEEecCCCCeecCCCCc---c
Confidence 998 5899999888889999999999999999999997 7999999999999999999999999999875322211 1
Q ss_pred ccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHhhhhhhh
Q 007541 186 WTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVCLLLNII 265 (599)
Q Consensus 186 ~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~~~~~~~ 265 (599)
....+||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+.......+...
T Consensus 153 ~~~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~~~------------------- 211 (325)
T cd05594 153 MKTFCGTPEYLAPEVLED--NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILME------------------- 211 (325)
T ss_pred cccccCCcccCCHHHHcc--CCCCCccccccccceeeeeccCCCCCCCCCHHHHHHHHhcC-------------------
Confidence 234579999999999876 67899999999999999999999999876654433322100
Q ss_pred hcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCC
Q 007541 266 WCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKD 345 (599)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL~~DP~~ 345 (599)
.. ......++.+.+||++||+.||++
T Consensus 212 ---------------------------------------------------~~---~~p~~~~~~~~~li~~~L~~dP~~ 237 (325)
T cd05594 212 ---------------------------------------------------EI---RFPRTLSPEAKSLLSGLLKKDPKQ 237 (325)
T ss_pred ---------------------------------------------------CC---CCCCCCCHHHHHHHHHHhhcCHHH
Confidence 00 011246788999999999999999
Q ss_pred CC-----CHHHHhcCccccCc
Q 007541 346 RP-----TAEEALADPYFKGL 361 (599)
Q Consensus 346 Rp-----Ta~e~L~HP~f~~~ 361 (599)
|+ ++.++|+||||.+.
T Consensus 238 R~~~~~~~~~~il~h~~~~~~ 258 (325)
T cd05594 238 RLGGGPDDAKEIMQHKFFAGI 258 (325)
T ss_pred hCCCCCCCHHHHhcCCCcCCC
Confidence 97 99999999999875
No 97
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=6e-44 Score=379.90 Aligned_cols=262 Identities=25% Similarity=0.395 Sum_probs=213.5
Q ss_pred CceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcc-cChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCcc
Q 007541 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIF-EHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKD 101 (599)
Q Consensus 23 ~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~-~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~ 101 (599)
+.|++++.||+|+||+||+|.++.+++.||||++.... ........+.+|+.+|..++|+||+++++.+. +..+
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~-----~~~~ 75 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQ-----DKRN 75 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEE-----cCCE
Confidence 47999999999999999999999999999999996432 12234567788999999999999999999984 3457
Q ss_pred EEEEEecCC-cCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCCC
Q 007541 102 IYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT 180 (599)
Q Consensus 102 iylV~E~~~-g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~ 180 (599)
+|+||||+. ++|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++......
T Consensus 76 ~~lv~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~ 155 (360)
T cd05627 76 LYLIMEFLPGGDMMTLLMKKDTLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAH 155 (360)
T ss_pred EEEEEeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEeeccCCccccccc
Confidence 999999998 5999999888889999999999999999999999999999999999999999999999999987542211
Q ss_pred CC--------------------------------cccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCC
Q 007541 181 PT--------------------------------AIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGK 228 (599)
Q Consensus 181 ~~--------------------------------~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~ 228 (599)
.. .......+||+.|+|||++.+ ..|+.++|||||||++|+|++|+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~--~~~~~~~DiwSlGvilyel~tG~ 233 (360)
T cd05627 156 RTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQ--TGYNKLCDWWSLGVIMYEMLIGY 233 (360)
T ss_pred ccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcC--CCCCCcceeccccceeeecccCC
Confidence 00 000124579999999999877 68999999999999999999999
Q ss_pred CCCCCCChhhHHHHHHHhcCCCCHHHHHHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHH
Q 007541 229 PLFPGKNVVHQLDIMTDLLGTPSPEAIARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRY 308 (599)
Q Consensus 229 ~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (599)
+||.+.+....+..|....
T Consensus 234 ~Pf~~~~~~~~~~~i~~~~------------------------------------------------------------- 252 (360)
T cd05627 234 PPFCSETPQETYRKVMNWK------------------------------------------------------------- 252 (360)
T ss_pred CCCCCCCHHHHHHHHHcCC-------------------------------------------------------------
Confidence 9998877655444332100
Q ss_pred HHhcccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCC---CHHHHhcCccccCc
Q 007541 309 LSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRP---TAEEALADPYFKGL 361 (599)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL~~DP~~Rp---Ta~e~L~HP~f~~~ 361 (599)
....+.. ....++.+++||.+|+. ||.+|+ +++|+++||||+++
T Consensus 253 -------~~~~~p~-~~~~s~~~~~li~~l~~-~p~~R~~~~~~~ei~~hp~f~~~ 299 (360)
T cd05627 253 -------ETLVFPP-EVPISEKAKDLILRFCT-DSENRIGSNGVEEIKSHPFFEGV 299 (360)
T ss_pred -------CceecCC-CCCCCHHHHHHHHHhcc-ChhhcCCCCCHHHHhcCCCCCCC
Confidence 0000110 12367899999999875 999998 58999999999985
No 98
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=1.1e-43 Score=379.78 Aligned_cols=264 Identities=24% Similarity=0.352 Sum_probs=214.6
Q ss_pred CCCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcc-cChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCC
Q 007541 21 EGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIF-EHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREF 99 (599)
Q Consensus 21 ~~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~-~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~ 99 (599)
..++|++++.||+|+||+||+|.++.+++.||||++.... ........+.+|+.+|+.++||||+++++++.. .
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~-----~ 115 (370)
T cd05596 41 KAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQD-----D 115 (370)
T ss_pred CHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEec-----C
Confidence 3578999999999999999999999999999999996422 222334557789999999999999999998843 3
Q ss_pred ccEEEEEecCC-cCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccC
Q 007541 100 KDIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFN 178 (599)
Q Consensus 100 ~~iylV~E~~~-g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~ 178 (599)
..+|+||||+. ++|.+++... .+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||+++....
T Consensus 116 ~~~~lv~Ey~~gg~L~~~l~~~-~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~ 194 (370)
T cd05596 116 KYLYMVMEYMPGGDLVNLMSNY-DIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDA 194 (370)
T ss_pred CEEEEEEcCCCCCcHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEcCCCCEEEEeccceeeccC
Confidence 57999999998 6899988654 689999999999999999999999999999999999999999999999999976532
Q ss_pred CCCCcccccccccCccccCccccccc--cCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHH
Q 007541 179 DTPTAIFWTDYVATRWYRAPELCGSF--FSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIA 256 (599)
Q Consensus 179 ~~~~~~~~t~~~gt~~Y~APE~l~~~--~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~ 256 (599)
... ......+||+.|+|||++... ...++.++|||||||++|+|++|++||.+.+....+..|.....
T Consensus 195 ~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~-------- 264 (370)
T cd05596 195 NGM--VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMDHKN-------- 264 (370)
T ss_pred CCc--ccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCC--------
Confidence 211 112345799999999988542 12488999999999999999999999998776554444332100
Q ss_pred HHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHH
Q 007541 257 RVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLE 336 (599)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~ 336 (599)
...+ ......+..+.+||.
T Consensus 265 ------------------------------------------------------------~~~~-~~~~~~s~~~~~li~ 283 (370)
T cd05596 265 ------------------------------------------------------------SLTF-PDDIEISKQAKDLIC 283 (370)
T ss_pred ------------------------------------------------------------cCCC-CCcCCCCHHHHHHHH
Confidence 0001 112346889999999
Q ss_pred HhcccCCCC--CCCHHHHhcCccccCc
Q 007541 337 RMLAFEPKD--RPTAEEALADPYFKGL 361 (599)
Q Consensus 337 ~mL~~DP~~--RpTa~e~L~HP~f~~~ 361 (599)
+||+.+|.+ |+|++|+|+||||++.
T Consensus 284 ~~L~~~p~r~~R~s~~ell~h~~~~~~ 310 (370)
T cd05596 284 AFLTDREVRLGRNGVDEIKSHPFFKND 310 (370)
T ss_pred HHccChhhccCCCCHHHHhcCcccCCC
Confidence 999999998 9999999999999863
No 99
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=4.8e-43 Score=368.77 Aligned_cols=302 Identities=24% Similarity=0.345 Sum_probs=219.3
Q ss_pred CCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCcc
Q 007541 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKD 101 (599)
Q Consensus 22 ~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~ 101 (599)
.++|++++.||+|+||.||+|++..+|..||+|++.... ......++.+|+.+|+.++||||+++++++... ..
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-----~~ 77 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEI-KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSD-----GE 77 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeeccc-CHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEEC-----CE
Confidence 578999999999999999999999999999999987532 223446788999999999999999999998543 47
Q ss_pred EEEEEecCC-cCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccC-ceEeecCCCCcEEeCCCCceeeeccCccccccCC
Q 007541 102 IYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTA-NVFHRDLKPKNILANADCKLKICDFGLARVAFND 179 (599)
Q Consensus 102 iylV~E~~~-g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~-gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~ 179 (599)
+|+||||++ ++|.+++.....+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 78 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 157 (331)
T cd06649 78 ISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS 157 (331)
T ss_pred EEEEeecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCCCcEEEccCccccccccc
Confidence 999999999 59999998888899999999999999999999986 6999999999999999999999999999765322
Q ss_pred CCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHh
Q 007541 180 TPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVC 259 (599)
Q Consensus 180 ~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~ 259 (599)
. ....++|..|+|||++.+ ..++.++|||||||++|+|++|+.||...+..+.. ..++.+..+.
T Consensus 158 ~-----~~~~~g~~~y~aPE~~~~--~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~----~~~~~~~~~~----- 221 (331)
T cd06649 158 M-----ANSFVGTRSYMSPERLQG--THYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELE----AIFGRPVVDG----- 221 (331)
T ss_pred c-----cccCCCCcCcCCHhHhcC--CCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHH----HHhccccccc-----
Confidence 1 234578999999999876 67999999999999999999999999876654322 2223221100
Q ss_pred hhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHhc
Q 007541 260 LLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERML 339 (599)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL 339 (599)
..+......+......... .... ..........+....+......... ....++++++||.+||
T Consensus 222 ---------~~~~~~~~~~~~~~~~~~~--~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~L 285 (331)
T cd06649 222 ---------EEGEPHSISPRPRPPGRPV--SGHG---MDSRPAMAIFELLDYIVNEPPPKLP--NGVFTPDFQEFVNKCL 285 (331)
T ss_pred ---------ccCCccccCcccccccccc--cccc---cccccchhHHHHHHHHHhCCCcCCC--CccccHHHHHHHHHHc
Confidence 0000000000000000000 0000 0000000111111111111111111 1246789999999999
Q ss_pred ccCCCCCCCHHHHhcCccccCc
Q 007541 340 AFEPKDRPTAEEALADPYFKGL 361 (599)
Q Consensus 340 ~~DP~~RpTa~e~L~HP~f~~~ 361 (599)
++||++|||++|+|+||||+..
T Consensus 286 ~~~P~~Rpt~~ell~h~~~~~~ 307 (331)
T cd06649 286 IKNPAERADLKMLMNHTFIKRS 307 (331)
T ss_pred cCCcccCCCHHHHhcChHHhhc
Confidence 9999999999999999999864
No 100
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=3.2e-43 Score=361.61 Aligned_cols=287 Identities=37% Similarity=0.646 Sum_probs=227.4
Q ss_pred cCCCCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCC
Q 007541 19 YGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRRE 98 (599)
Q Consensus 19 ~~~~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~ 98 (599)
||.-++|++.+.||+|++|+||+|.++.+++.||||.+...... .....+.+|+.+|+.++|+||+++++++..
T Consensus 1 ~~~~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~----- 74 (291)
T cd07844 1 FGKLETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEE-GAPFTAIREASLLKDLKHANIVTLHDIIHT----- 74 (291)
T ss_pred CCCccceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEeccccc-CCchhHHHHHHHHhhCCCcceeeEEEEEec-----
Confidence 57789999999999999999999999999999999998653222 122346689999999999999999999843
Q ss_pred CccEEEEEecCCcCHHHHHHhC-CCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCcccccc
Q 007541 99 FKDIYVVFELMESDLHQVIKAN-DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAF 177 (599)
Q Consensus 99 ~~~iylV~E~~~g~L~~~i~~~-~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~ 177 (599)
..+.|+||||+.++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++...
T Consensus 75 ~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~ 154 (291)
T cd07844 75 KKTLTLVFEYLDTDLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLISERGELKLADFGLARAKS 154 (291)
T ss_pred CCeEEEEEecCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEEcCCCCEEECccccccccC
Confidence 3589999999999999988764 468999999999999999999999999999999999999999999999999997542
Q ss_pred CCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCC-hhhHHHHHHHhcCCCCHHHHH
Q 007541 178 NDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKN-VVHQLDIMTDLLGTPSPEAIA 256 (599)
Q Consensus 178 ~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~-~~~~l~~I~~~lG~p~~e~i~ 256 (599)
.... ......++..|+|||++.+. ..++.++||||+||++++|++|+.+|.+.. ..+++..+.+.++.+.++.+.
T Consensus 155 ~~~~---~~~~~~~~~~~~aPE~~~~~-~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (291)
T cd07844 155 VPSK---TYSNEVVTLWYRPPDVLLGS-TEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWP 230 (291)
T ss_pred CCCc---cccccccccccCCcHHhhcC-cccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhh
Confidence 2111 11233567889999987542 457889999999999999999999998776 677888888999998887665
Q ss_pred HHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCC--HHHHHH
Q 007541 257 RVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNAN--PLALRL 334 (599)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s--~~a~dL 334 (599)
.........-. ......+..+....+..+ ..+.+|
T Consensus 231 ~~~~~~~~~~~-------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~l 267 (291)
T cd07844 231 GVSSNPEFKPY-------------------------------------------SFPFYPPRPLINHAPRLDRIPHGEEL 267 (291)
T ss_pred hhhhccccccc-------------------------------------------cccccCChhHHHhCcCCCCchhHHHH
Confidence 53211110000 000000111112223334 778999
Q ss_pred HHHhcccCCCCCCCHHHHhcCccc
Q 007541 335 LERMLAFEPKDRPTAEEALADPYF 358 (599)
Q Consensus 335 L~~mL~~DP~~RpTa~e~L~HP~f 358 (599)
|.+||++||.+|||+.|+|+||||
T Consensus 268 i~~~L~~~p~~Rps~~e~l~~~~f 291 (291)
T cd07844 268 ALKFLQYEPKKRISAAEAMKHPYF 291 (291)
T ss_pred HHHHhccCcccccCHHHHhcCCCC
Confidence 999999999999999999999998
No 101
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5e-44 Score=386.05 Aligned_cols=256 Identities=25% Similarity=0.464 Sum_probs=219.7
Q ss_pred CCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcc-cChhhHHHHHHHHHHHHhcC-CCCccccceeecCCCcCCC
Q 007541 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIF-EHVSDATRILREIKLLRLLR-HPDIVEIKHILLPPSRREF 99 (599)
Q Consensus 22 ~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~-~~~~~~~~i~rEi~iL~~l~-HpnIv~l~~v~~~~s~~~~ 99 (599)
-+.|.++++||+|+||+|++|..+.+++.+|||++++.. ....+.+....|-.|+...+ ||.++.|+..|.+.
T Consensus 367 l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~----- 441 (694)
T KOG0694|consen 367 LDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTK----- 441 (694)
T ss_pred ccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccC-----
Confidence 368999999999999999999999999999999998643 34455677889999988886 99999999999544
Q ss_pred ccEEEEEecCCc-CHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccC
Q 007541 100 KDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFN 178 (599)
Q Consensus 100 ~~iylV~E~~~g-~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~ 178 (599)
.++|+||||+.| |+..+ ...+.+++..++.|...|+.||+|||++|||+||||.+|||+|.+|.+||+|||+++..-.
T Consensus 442 ~~l~fvmey~~Ggdm~~~-~~~~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m~ 520 (694)
T KOG0694|consen 442 EHLFFVMEYVAGGDLMHH-IHTDVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLLDTEGHVKIADFGLCKEGMG 520 (694)
T ss_pred CeEEEEEEecCCCcEEEE-EecccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEEcccCcEEecccccccccCC
Confidence 589999999995 74443 4446899999999999999999999999999999999999999999999999999986432
Q ss_pred CCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHH
Q 007541 179 DTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARV 258 (599)
Q Consensus 179 ~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~ 258 (599)
... .-++.|||+.|+|||++.+ ..|+.++|-|||||+|||||.|.+||+|++..+..+.|...-
T Consensus 521 ~g~---~TsTfCGTpey~aPEil~e--~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~~d~----------- 584 (694)
T KOG0694|consen 521 QGD---RTSTFCGTPEFLAPEVLTE--QSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIVNDE----------- 584 (694)
T ss_pred CCC---ccccccCChhhcChhhhcc--CcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHhcCC-----------
Confidence 221 2256899999999999988 799999999999999999999999999999988887775311
Q ss_pred hhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCC-CCCCHHHHHHHHH
Q 007541 259 CLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKF-PNANPLALRLLER 337 (599)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~a~dLL~~ 337 (599)
..+ -.++.+++++|++
T Consensus 585 ---------------------------------------------------------------~~yP~~ls~ea~~il~~ 601 (694)
T KOG0694|consen 585 ---------------------------------------------------------------VRYPRFLSKEAIAIMRR 601 (694)
T ss_pred ---------------------------------------------------------------CCCCCcccHHHHHHHHH
Confidence 011 2468899999999
Q ss_pred hcccCCCCCCC-----HHHHhcCccccCcc
Q 007541 338 MLAFEPKDRPT-----AEEALADPYFKGLA 362 (599)
Q Consensus 338 mL~~DP~~RpT-----a~e~L~HP~f~~~~ 362 (599)
||..||++|.. ++++..||||+.+.
T Consensus 602 ll~k~p~kRLG~~e~d~~~i~~hpFFr~i~ 631 (694)
T KOG0694|consen 602 LLRKNPEKRLGSGERDAEDIKKHPFFRSID 631 (694)
T ss_pred HhccCcccccCCCCCCchhhhhCCccccCC
Confidence 99999999975 68999999999863
No 102
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=1.6e-43 Score=378.70 Aligned_cols=264 Identities=25% Similarity=0.367 Sum_probs=213.0
Q ss_pred CCCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcc-cChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCC
Q 007541 21 EGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIF-EHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREF 99 (599)
Q Consensus 21 ~~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~-~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~ 99 (599)
..++|++++.||+|+||.||+|.++.+++.||+|++.+.. ........+.+|+.+++.++||||+++++++.. .
T Consensus 41 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~-----~ 115 (370)
T cd05621 41 KAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQD-----D 115 (370)
T ss_pred CHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEc-----C
Confidence 3578999999999999999999999999999999986422 222344567799999999999999999999843 3
Q ss_pred ccEEEEEecCC-cCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccC
Q 007541 100 KDIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFN 178 (599)
Q Consensus 100 ~~iylV~E~~~-g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~ 178 (599)
..+|+||||+. ++|.+++... .+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+|.....
T Consensus 116 ~~~~lv~Ey~~gg~L~~~l~~~-~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~ 194 (370)
T cd05621 116 KYLYMVMEYMPGGDLVNLMSNY-DVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDE 194 (370)
T ss_pred CEEEEEEcCCCCCcHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEEecccceeccc
Confidence 57999999998 6999998765 689999999999999999999999999999999999999999999999999986532
Q ss_pred CCCCcccccccccCccccCcccccccc--CCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHH
Q 007541 179 DTPTAIFWTDYVATRWYRAPELCGSFF--SKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIA 256 (599)
Q Consensus 179 ~~~~~~~~t~~~gt~~Y~APE~l~~~~--~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~ 256 (599)
... ......+||+.|+|||++.... ..++.++||||+||++|+|++|+.||.+.+....+..|.+....
T Consensus 195 ~~~--~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~~~~i~~~~~~------- 265 (370)
T cd05621 195 TGM--VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNS------- 265 (370)
T ss_pred CCc--eecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHHHHHHHhCCcc-------
Confidence 211 1123567999999999986521 23789999999999999999999999887765554444321110
Q ss_pred HHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHH
Q 007541 257 RVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLE 336 (599)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~ 336 (599)
..+. ....++..+++||.
T Consensus 266 -------------------------------------------------------------~~~p-~~~~~s~~~~~li~ 283 (370)
T cd05621 266 -------------------------------------------------------------LNFP-EDVEISKHAKNLIC 283 (370)
T ss_pred -------------------------------------------------------------cCCC-CcccCCHHHHHHHH
Confidence 0000 01246788999999
Q ss_pred HhcccCCCC--CCCHHHHhcCccccCc
Q 007541 337 RMLAFEPKD--RPTAEEALADPYFKGL 361 (599)
Q Consensus 337 ~mL~~DP~~--RpTa~e~L~HP~f~~~ 361 (599)
+||+.++.+ |+|++|+|+||||+..
T Consensus 284 ~~L~~~~~r~~R~~~~e~l~hp~~~~~ 310 (370)
T cd05621 284 AFLTDREVRLGRNGVEEIKQHPFFKND 310 (370)
T ss_pred HHccCchhccCCCCHHHHhcCcccCCC
Confidence 999865544 8999999999999863
No 103
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=5e-43 Score=360.52 Aligned_cols=288 Identities=38% Similarity=0.644 Sum_probs=228.6
Q ss_pred CceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcC-CCCccccceeecCCCcCCCcc
Q 007541 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLR-HPDIVEIKHILLPPSRREFKD 101 (599)
Q Consensus 23 ~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~-HpnIv~l~~v~~~~s~~~~~~ 101 (599)
++|++.+.||+|+||.||+|.+..+|+.||||++............+.+|+.+++.+. |+||+++++++..........
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~ 80 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS 80 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence 4799999999999999999999999999999998754433334456788999999996 699999999986554333445
Q ss_pred EEEEEecCCcCHHHHHHhC-----CCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCC-CCceeeeccCcccc
Q 007541 102 IYVVFELMESDLHQVIKAN-----DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANA-DCKLKICDFGLARV 175 (599)
Q Consensus 102 iylV~E~~~g~L~~~i~~~-----~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~-~~~lKL~DFGlA~~ 175 (599)
+|+||||++++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++. ++.+||+|||+++.
T Consensus 81 ~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~~~~~~~kl~dfg~~~~ 160 (295)
T cd07837 81 LYLVFEYLDSDLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDKQKGLLKIADLGLGRA 160 (295)
T ss_pred EEEEeeccCcCHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEecCCCeEEEeeccccee
Confidence 8999999999999988653 35799999999999999999999999999999999999999 89999999999975
Q ss_pred ccCCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHH
Q 007541 176 AFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAI 255 (599)
Q Consensus 176 ~~~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i 255 (599)
...... ..+...++++|+|||.+.+. ..++.++||||+||++|+|++|.+||.+.+....+..+...++.++.+.+
T Consensus 161 ~~~~~~---~~~~~~~~~~~~aPE~~~~~-~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (295)
T cd07837 161 FSIPVK---SYTHEIVTLWYRAPEVLLGS-THYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVW 236 (295)
T ss_pred cCCCcc---ccCCcccccCCCChHHhhCC-CCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCChhhC
Confidence 432211 12334678899999987542 46789999999999999999999999999988888888888887776543
Q ss_pred HHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHH
Q 007541 256 ARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLL 335 (599)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL 335 (599)
...... ..+. ......+..+....+..++.+.+||
T Consensus 237 ~~~~~~--------------------------------------------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i 271 (295)
T cd07837 237 PGVSKL--------------------------------------------RDWH-EFPQWKPQDLSRAVPDLSPEGLDLL 271 (295)
T ss_pred cchhhc--------------------------------------------cchh-hcCcccchhHHHhccccCHHHHHHH
Confidence 220000 0000 0011111122233456788999999
Q ss_pred HHhcccCCCCCCCHHHHhcCcccc
Q 007541 336 ERMLAFEPKDRPTAEEALADPYFK 359 (599)
Q Consensus 336 ~~mL~~DP~~RpTa~e~L~HP~f~ 359 (599)
.+||..||.+|||+.|+|.||||+
T Consensus 272 ~~~l~~~P~~R~~~~eil~~~~~~ 295 (295)
T cd07837 272 QKMLRYDPAKRISAKAALTHPYFD 295 (295)
T ss_pred HHHccCChhhcCCHHHHhcCCCcC
Confidence 999999999999999999999985
No 104
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=1.3e-43 Score=371.39 Aligned_cols=250 Identities=25% Similarity=0.414 Sum_probs=208.4
Q ss_pred EEEeecCceEEEEEEECCCCcEEEEEEecCccc-ChhhHHHHHHHHHHHHhc-CCCCccccceeecCCCcCCCccEEEEE
Q 007541 29 EVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFE-HVSDATRILREIKLLRLL-RHPDIVEIKHILLPPSRREFKDIYVVF 106 (599)
Q Consensus 29 ~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~-~~~~~~~i~rEi~iL~~l-~HpnIv~l~~v~~~~s~~~~~~iylV~ 106 (599)
++||+|+||.||+|.++.+++.||||+++.... .......+..|+.++..+ +||||+++++++.. ...+|+||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~-----~~~~~lv~ 75 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQT-----KDRLFFVM 75 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEc-----CCeEEEEE
Confidence 469999999999999999999999999875321 223445677899998866 69999999999954 34799999
Q ss_pred ecCC-cCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCCCCCccc
Q 007541 107 ELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIF 185 (599)
Q Consensus 107 E~~~-g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~~~~~~ 185 (599)
||++ ++|...+...+.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++....... .
T Consensus 76 E~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~---~ 152 (321)
T cd05591 76 EYVNGGDLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGV---T 152 (321)
T ss_pred eCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeecccceecccCCc---c
Confidence 9998 59999998888899999999999999999999999999999999999999999999999999975432221 1
Q ss_pred ccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHhhhhhhh
Q 007541 186 WTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVCLLLNII 265 (599)
Q Consensus 186 ~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~~~~~~~ 265 (599)
....+||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+....+..|....
T Consensus 153 ~~~~~gt~~y~aPE~~~~--~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i~~~~------------------ 212 (321)
T cd05591 153 TTTFCGTPDYIAPEILQE--LEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILHDD------------------ 212 (321)
T ss_pred ccccccCccccCHHHHcC--CCCCCccceechhHHHHHHhcCCCCCCCCCHHHHHHHHHcCC------------------
Confidence 245678999999999876 678999999999999999999999999877655544432100
Q ss_pred hcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCC
Q 007541 266 WCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKD 345 (599)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL~~DP~~ 345 (599)
. ......++.+.+||.+||+.||++
T Consensus 213 ----------------------------------------------------~---~~p~~~~~~~~~ll~~~L~~dp~~ 237 (321)
T cd05591 213 ----------------------------------------------------V---LYPVWLSKEAVSILKAFMTKNPNK 237 (321)
T ss_pred ----------------------------------------------------C---CCCCCCCHHHHHHHHHHhccCHHH
Confidence 0 001235788999999999999999
Q ss_pred CC-------CHHHHhcCccccCc
Q 007541 346 RP-------TAEEALADPYFKGL 361 (599)
Q Consensus 346 Rp-------Ta~e~L~HP~f~~~ 361 (599)
|+ +++++++||||.++
T Consensus 238 R~~~~~~~~~~~~~~~hp~~~~~ 260 (321)
T cd05591 238 RLGCVASQGGEDAIKQHPFFKEI 260 (321)
T ss_pred cCCCCCCCCCHHHHhcCCccCCC
Confidence 99 99999999999764
No 105
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=100.00 E-value=6.4e-43 Score=369.42 Aligned_cols=303 Identities=42% Similarity=0.673 Sum_probs=231.9
Q ss_pred CCCCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCc---
Q 007541 20 GEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSR--- 96 (599)
Q Consensus 20 ~~~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~--- 96 (599)
..+++|.+.+.||.|+||.||+|.++.+|+.||+|++.... ......+.+|+.+|+.++||||+++++++.....
T Consensus 2 ~~~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~--~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 79 (342)
T cd07854 2 DLGSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTD--PQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLT 79 (342)
T ss_pred CcCcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCC--CchHHHHHHHHHHHHhcCCCcchhhHhhhcccccccc
Confidence 45789999999999999999999999999999999986432 2345667899999999999999999988765321
Q ss_pred ------CCCccEEEEEecCCcCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCC-CCceeeec
Q 007541 97 ------REFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANA-DCKLKICD 169 (599)
Q Consensus 97 ------~~~~~iylV~E~~~g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~-~~~lKL~D 169 (599)
.+...+|+||||++++|.+++.. +.+++..++.++.||+.||.|||+.||+||||||+|||++. ++.+||+|
T Consensus 80 ~~~~~~~~~~~~~lv~e~~~~~L~~~~~~-~~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~~~~~~~kl~d 158 (342)
T cd07854 80 EDVGSLTELNSVYIVQEYMETDLANVLEQ-GPLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINTEDLVLKIGD 158 (342)
T ss_pred cccccccccceEEEEeecccccHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCceEEECC
Confidence 12246899999999999988865 46999999999999999999999999999999999999975 56789999
Q ss_pred cCccccccCCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCC
Q 007541 170 FGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGT 249 (599)
Q Consensus 170 FGlA~~~~~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~ 249 (599)
||+++................++.+|+|||.+... ..++.++|||||||++++|++|+.||.+.+.......+.+....
T Consensus 159 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~ 237 (342)
T cd07854 159 FGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSP-NNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPV 237 (342)
T ss_pred cccceecCCccccccccccccccccccCHHHHhCc-cccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCC
Confidence 99997653222211122334678899999987542 56888999999999999999999999988877777766665554
Q ss_pred CCHHHHHHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCH
Q 007541 250 PSPEAIARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANP 329 (599)
Q Consensus 250 p~~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 329 (599)
+..+..... .+.. ...+.........++....+..+.
T Consensus 238 ~~~~~~~~~------------------------------------------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 274 (342)
T cd07854 238 VREEDRNEL------------------------------------------LNVI-PSFVRNDGGEPRRPLRDLLPGVNP 274 (342)
T ss_pred CChHHhhhh------------------------------------------hhhh-hhhhhhcccccCCCHHHHccCCCH
Confidence 444322220 0000 000000011112223334456888
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHhcCccccCcccCCCCCC
Q 007541 330 LALRLLERMLAFEPKDRPTAEEALADPYFKGLAKVEREPS 369 (599)
Q Consensus 330 ~a~dLL~~mL~~DP~~RpTa~e~L~HP~f~~~~~~~~~p~ 369 (599)
.+.+||.+||+.||.+|||+.|+|.||||+.+..+..+|.
T Consensus 275 ~~~~li~~~L~~dP~~R~t~~ell~h~~~~~~~~~~~~~~ 314 (342)
T cd07854 275 EALDFLEQILTFNPMDRLTAEEALMHPYMSCYSCPFDEPV 314 (342)
T ss_pred HHHHHHHHHhCCCchhccCHHHHhCCCccccccCCccccC
Confidence 9999999999999999999999999999998765544443
No 106
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=2.5e-43 Score=369.55 Aligned_cols=255 Identities=23% Similarity=0.403 Sum_probs=212.1
Q ss_pred ceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCccc-ChhhHHHHHHHHHHHHhcC-CCCccccceeecCCCcCCCcc
Q 007541 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFE-HVSDATRILREIKLLRLLR-HPDIVEIKHILLPPSRREFKD 101 (599)
Q Consensus 24 rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~-~~~~~~~i~rEi~iL~~l~-HpnIv~l~~v~~~~s~~~~~~ 101 (599)
.|.+++.||+|+||.||+|+++.+++.||||++++... .......+..|..++..+. |++|+++++++.. ...
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~-----~~~ 75 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQT-----MDR 75 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEec-----CCE
Confidence 48899999999999999999999999999999975322 2233455678888888774 8999999998843 357
Q ss_pred EEEEEecCC-cCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCCC
Q 007541 102 IYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT 180 (599)
Q Consensus 102 iylV~E~~~-g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~ 180 (599)
+|+||||+. ++|.+.+...+.+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++......
T Consensus 76 ~~lv~E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~ 155 (323)
T cd05616 76 LYFVMEYVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDG 155 (323)
T ss_pred EEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEECCCCcEEEccCCCceecCCCC
Confidence 999999998 6999999888889999999999999999999999999999999999999999999999999997542211
Q ss_pred CCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHhh
Q 007541 181 PTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVCL 260 (599)
Q Consensus 181 ~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~~ 260 (599)
......+||+.|+|||++.+ ..++.++||||+||++|+|++|+.||.+.+....+..|....
T Consensus 156 ---~~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~~i~~~~------------- 217 (323)
T cd05616 156 ---VTTKTFCGTPDYIAPEIIAY--QPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHN------------- 217 (323)
T ss_pred ---CccccCCCChhhcCHHHhcC--CCCCCccchhchhHHHHHHHhCCCCCCCCCHHHHHHHHHhCC-------------
Confidence 11235678999999999976 679999999999999999999999998877655544433210
Q ss_pred hhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHhcc
Q 007541 261 LLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLA 340 (599)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL~ 340 (599)
.. .....++.+.+||.+||+
T Consensus 218 ---------------------------------------------------------~~---~p~~~s~~~~~li~~~l~ 237 (323)
T cd05616 218 ---------------------------------------------------------VA---YPKSMSKEAVAICKGLMT 237 (323)
T ss_pred ---------------------------------------------------------CC---CCCcCCHHHHHHHHHHcc
Confidence 00 112467889999999999
Q ss_pred cCCCCCCC-----HHHHhcCccccCc
Q 007541 341 FEPKDRPT-----AEEALADPYFKGL 361 (599)
Q Consensus 341 ~DP~~RpT-----a~e~L~HP~f~~~ 361 (599)
.||.+|++ ..++++||||+.+
T Consensus 238 ~~p~~R~~~~~~~~~~i~~h~~~~~~ 263 (323)
T cd05616 238 KHPGKRLGCGPEGERDIKEHAFFRYI 263 (323)
T ss_pred cCHHhcCCCCCCCHHHHhcCCCcCCC
Confidence 99999998 5899999999864
No 107
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=4.8e-43 Score=358.42 Aligned_cols=282 Identities=37% Similarity=0.685 Sum_probs=221.2
Q ss_pred CceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccE
Q 007541 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDI 102 (599)
Q Consensus 23 ~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~i 102 (599)
++|++.+.||+|++|.||+|.++.+|+.||+|++............+.+|+.+++.++|+||+++++++.. ...+
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-----~~~~ 75 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRR-----KRKL 75 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEee-----CCEE
Confidence 58999999999999999999999999999999986433222333457799999999999999999999843 3479
Q ss_pred EEEEecCCc-CHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCCCC
Q 007541 103 YVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTP 181 (599)
Q Consensus 103 ylV~E~~~g-~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~~ 181 (599)
|+||||+++ .|..++.....+++..++.++.||+.||.|||+.||+||||||+||+++.++.+||+|||++........
T Consensus 76 ~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~ 155 (286)
T cd07847 76 HLVFEYCDHTVLNELEKNPRGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILITKQGQIKLCDFGFARILTGPGD 155 (286)
T ss_pred EEEEeccCccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEEcCCCcEEECccccceecCCCcc
Confidence 999999996 5555555666799999999999999999999999999999999999999999999999999987543221
Q ss_pred CcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHhhh
Q 007541 182 TAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVCLL 261 (599)
Q Consensus 182 ~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~~~ 261 (599)
......++.+|+|||.+.+. ..++.++||||+||++++|++|++||.+.+..+.+..+...++...+.....
T Consensus 156 ---~~~~~~~~~~~~aPE~~~~~-~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 227 (286)
T cd07847 156 ---DYTDYVATRWYRAPELLVGD-TQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQI---- 227 (286)
T ss_pred ---cccCcccccccCCHHHHhCC-CCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhh----
Confidence 12345678999999987552 4688999999999999999999999999888887777776666544321111
Q ss_pred hhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccC---CCCCCCCCCCCCCHHHHHHHHHh
Q 007541 262 LNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKK---KPIPFSQKFPNANPLALRLLERM 338 (599)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~s~~a~dLL~~m 338 (599)
|. . ..+...+... ...++...++..+..+.+||.+|
T Consensus 228 ----~~-~------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~ 266 (286)
T cd07847 228 ----FS-T------------------------------------NQFFKGLSIPEPETREPLESKFPNISSPALSFLKGC 266 (286)
T ss_pred ----cc-c------------------------------------ccccccccCCCcccccCHHHHhccCCHHHHHHHHHH
Confidence 00 0 0000000000 01111223456788999999999
Q ss_pred cccCCCCCCCHHHHhcCccc
Q 007541 339 LAFEPKDRPTAEEALADPYF 358 (599)
Q Consensus 339 L~~DP~~RpTa~e~L~HP~f 358 (599)
|+.||++|||+.|+|.||||
T Consensus 267 l~~~p~~Rp~~~eil~~~~f 286 (286)
T cd07847 267 LQMDPTERLSCEELLEHPYF 286 (286)
T ss_pred hcCCccccCCHHHHhcCCCC
Confidence 99999999999999999998
No 108
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=7.5e-43 Score=361.10 Aligned_cols=297 Identities=34% Similarity=0.550 Sum_probs=227.3
Q ss_pred CCCCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCc---
Q 007541 20 GEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSR--- 96 (599)
Q Consensus 20 ~~~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~--- 96 (599)
..-++|++++.||+|+||.||+|.+..+++.||||++............+.+|+.+++.++||||+++++++.....
T Consensus 9 ~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 88 (310)
T cd07865 9 DEVSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYN 88 (310)
T ss_pred chhhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEeccccccc
Confidence 44568999999999999999999999999999999986543333334456789999999999999999999865431
Q ss_pred CCCccEEEEEecCCcCHHHHHHhCC-CCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCcccc
Q 007541 97 REFKDIYVVFELMESDLHQVIKAND-DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARV 175 (599)
Q Consensus 97 ~~~~~iylV~E~~~g~L~~~i~~~~-~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~ 175 (599)
.....+|+||||+.++|.+++.... .+++..++.++.||+.||.|||++||+|+||||+|||++.++.+||+|||++..
T Consensus 89 ~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~ 168 (310)
T cd07865 89 RYKGSFYLVFEFCEHDLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILITKDGILKLADFGLARA 168 (310)
T ss_pred CCCceEEEEEcCCCcCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECCCCcEEECcCCCccc
Confidence 2335689999999999998887653 789999999999999999999999999999999999999999999999999976
Q ss_pred ccCCCCC-cccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHH
Q 007541 176 AFNDTPT-AIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEA 254 (599)
Q Consensus 176 ~~~~~~~-~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~ 254 (599)
....... ........++..|+|||++.+. ..++.++||||+||++|+|++|+++|.+.+...++..+..+.|..+++.
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (310)
T cd07865 169 FSLSKNSKPNRYTNRVVTLWYRPPELLLGE-RDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITPEV 247 (310)
T ss_pred ccCCcccCCCCccCcccCccccCcHHhcCC-cccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhh
Confidence 5332211 1112345678899999987552 4578899999999999999999999999998888888888888777654
Q ss_pred HHHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHH
Q 007541 255 IARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRL 334 (599)
Q Consensus 255 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dL 334 (599)
+........ | +. .. ............ + .....++.+.+|
T Consensus 248 ~~~~~~~~~--~---~~----------------------~~----~~~~~~~~~~~~--------l--~~~~~~~~~~dl 286 (310)
T cd07865 248 WPGVDKLEL--F---KK----------------------ME----LPQGQKRKVKER--------L--KPYVKDPHALDL 286 (310)
T ss_pred cccccchhh--h---hh----------------------cc----CCCccchhhHHh--------c--ccccCCHHHHHH
Confidence 332100000 0 00 00 000000000000 0 001246778999
Q ss_pred HHHhcccCCCCCCCHHHHhcCccc
Q 007541 335 LERMLAFEPKDRPTAEEALADPYF 358 (599)
Q Consensus 335 L~~mL~~DP~~RpTa~e~L~HP~f 358 (599)
|.+||..||.+|||++|+|+||||
T Consensus 287 i~~~l~~~P~~R~t~~e~l~h~~f 310 (310)
T cd07865 287 IDKLLVLDPAKRIDADTALNHDFF 310 (310)
T ss_pred HHHHhcCChhhccCHHHHhcCCCC
Confidence 999999999999999999999998
No 109
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=2.3e-43 Score=369.92 Aligned_cols=251 Identities=27% Similarity=0.470 Sum_probs=207.2
Q ss_pred EEEEeecCceEEEEEEEC---CCCcEEEEEEecCcc--cChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccE
Q 007541 28 EEVIGKGSYGVVCSAYDT---RTGEKVAIKKINDIF--EHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDI 102 (599)
Q Consensus 28 ~~~LG~G~~g~V~~a~d~---~tg~~vAIK~i~~~~--~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~i 102 (599)
++.||+|+||.||+|++. .+++.||||+++... ........+.+|+.+|+.++||||+++++++.. ...+
T Consensus 1 ~~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~-----~~~~ 75 (323)
T cd05584 1 LKVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQT-----GGKL 75 (323)
T ss_pred CceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEec-----CCeE
Confidence 367999999999999864 578999999987532 122334567789999999999999999999844 3479
Q ss_pred EEEEecCC-cCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCCCC
Q 007541 103 YVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTP 181 (599)
Q Consensus 103 ylV~E~~~-g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~~ 181 (599)
|+||||+. ++|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 76 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 155 (323)
T cd05584 76 YLILEYLSGGELFMHLEREGIFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGT 155 (323)
T ss_pred EEEEeCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEeeCcCCeecccCCC
Confidence 99999999 59999998888899999999999999999999999999999999999999999999999999875322211
Q ss_pred CcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHhhh
Q 007541 182 TAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVCLL 261 (599)
Q Consensus 182 ~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~~~ 261 (599)
.....+||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+....+..+...
T Consensus 156 ---~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~~~~~~~--------------- 215 (323)
T cd05584 156 ---VTHTFCGTIEYMAPEILMR--SGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKILKG--------------- 215 (323)
T ss_pred ---cccccCCCccccChhhccC--CCCCCcceecccHHHHHHHhcCCCCCCCCCHHHHHHHHHcC---------------
Confidence 1234579999999999876 57889999999999999999999999877654433332210
Q ss_pred hhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHhccc
Q 007541 262 LNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAF 341 (599)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL~~ 341 (599)
. ....+..++.+.+||.+||+.
T Consensus 216 -------------------------------------------------------~---~~~~~~~~~~~~~li~~~l~~ 237 (323)
T cd05584 216 -------------------------------------------------------K---LNLPPYLTPEARDLLKKLLKR 237 (323)
T ss_pred -------------------------------------------------------C---CCCCCCCCHHHHHHHHHHccc
Confidence 0 011234678899999999999
Q ss_pred CCCCCC-----CHHHHhcCccccCc
Q 007541 342 EPKDRP-----TAEEALADPYFKGL 361 (599)
Q Consensus 342 DP~~Rp-----Ta~e~L~HP~f~~~ 361 (599)
||.+|+ +++++++||||...
T Consensus 238 ~p~~R~~~~~~~~~~l~~h~~~~~~ 262 (323)
T cd05584 238 NPSSRLGAGPGDAAEVQSHPFFRHV 262 (323)
T ss_pred CHhHcCCCCCCCHHHHhcCCCcCCC
Confidence 999999 89999999999864
No 110
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=3.2e-43 Score=379.04 Aligned_cols=282 Identities=23% Similarity=0.294 Sum_probs=218.2
Q ss_pred CCceEEEEEEeecCceEEEEEEEC--CCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCC
Q 007541 22 GSRYKIEEVIGKGSYGVVCSAYDT--RTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREF 99 (599)
Q Consensus 22 ~~rY~i~~~LG~G~~g~V~~a~d~--~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~ 99 (599)
..+|++++.||+|+||.||+|... .++..||+|.+... ....+|+.+|+.++||||+++++++.. .
T Consensus 91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-------~~~~~E~~il~~l~h~~iv~~~~~~~~-----~ 158 (392)
T PHA03207 91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-------KTPGREIDILKTISHRAIINLIHAYRW-----K 158 (392)
T ss_pred cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-------ccHHHHHHHHHhcCCCCccceeeeEee-----C
Confidence 457999999999999999999754 45788999987532 224589999999999999999999843 3
Q ss_pred ccEEEEEecCCcCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCC
Q 007541 100 KDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFND 179 (599)
Q Consensus 100 ~~iylV~E~~~g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~ 179 (599)
..+|+|||++.++|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 159 ~~~~lv~e~~~~~l~~~l~~~~~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~ 238 (392)
T PHA03207 159 STVCMVMPKYKCDLFTYVDRSGPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFLDEPENAVLGDFGAACKLDAH 238 (392)
T ss_pred CEEEEEehhcCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEccCccccccCcc
Confidence 57999999999999999977788999999999999999999999999999999999999999999999999999765432
Q ss_pred CCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCC---hhhHHHHHHHhcCCCCHHHHH
Q 007541 180 TPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKN---VVHQLDIMTDLLGTPSPEAIA 256 (599)
Q Consensus 180 ~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~---~~~~l~~I~~~lG~p~~e~i~ 256 (599)
... ......+||+.|+|||++.. ..|+.++|||||||++|+|++|+.||.+.. ...++..|.+.++..+.+...
T Consensus 239 ~~~-~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~ 315 (392)
T PHA03207 239 PDT-PQCYGWSGTLETNSPELLAL--DPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQ 315 (392)
T ss_pred ccc-ccccccccccCccCHhHhcC--CCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCC
Confidence 211 12234679999999999876 679999999999999999999999997764 355666777666654432110
Q ss_pred HHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcc--cCCCCCCCCCC--CCCCHHHH
Q 007541 257 RVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMR--KKKPIPFSQKF--PNANPLAL 332 (599)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~--~~~s~~a~ 332 (599)
. ........+.... ...+..+...+ ...+..+.
T Consensus 316 ~-------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (392)
T PHA03207 316 N-------------------------------------------GSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVE 352 (392)
T ss_pred c-------------------------------------------cchhHHHHHHhhcccccCCccccchhhccCcchhHH
Confidence 0 0000000011110 01111111111 23567899
Q ss_pred HHHHHhcccCCCCCCCHHHHhcCccccCc
Q 007541 333 RLLERMLAFEPKDRPTAEEALADPYFKGL 361 (599)
Q Consensus 333 dLL~~mL~~DP~~RpTa~e~L~HP~f~~~ 361 (599)
+||++||.+||.+|||+.|+|.||||...
T Consensus 353 ~li~~ml~~dp~~Rpsa~e~l~~p~f~~~ 381 (392)
T PHA03207 353 YLIAKMLTFDQEFRPSAQDILSLPLFTKE 381 (392)
T ss_pred HHHHHHhccChhhCCCHHHHhhCchhhcc
Confidence 99999999999999999999999999753
No 111
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=5.6e-43 Score=368.39 Aligned_cols=264 Identities=22% Similarity=0.398 Sum_probs=211.8
Q ss_pred CceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcc-cChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCcc
Q 007541 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIF-EHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKD 101 (599)
Q Consensus 23 ~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~-~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~ 101 (599)
++|++++.||+|+||+||+|.++.+++.||||++.+.. ........+.+|+.+++.++|+||+++++++.. ..+
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-----~~~ 75 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQD-----ENN 75 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEec-----CCe
Confidence 47999999999999999999999999999999986421 122334567789999999999999999999843 357
Q ss_pred EEEEEecCC-cCHHHHHHh-CCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCC
Q 007541 102 IYVVFELME-SDLHQVIKA-NDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFND 179 (599)
Q Consensus 102 iylV~E~~~-g~L~~~i~~-~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~ 179 (599)
+|+||||+. ++|.+++.. ...+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++......
T Consensus 76 ~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 155 (331)
T cd05597 76 LYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLAD 155 (331)
T ss_pred EEEEEecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEECCCCCEEEEECCceeecCCC
Confidence 999999997 699999976 457999999999999999999999999999999999999999999999999999765332
Q ss_pred CCCcccccccccCccccCccccccc---cCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHH
Q 007541 180 TPTAIFWTDYVATRWYRAPELCGSF---FSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIA 256 (599)
Q Consensus 180 ~~~~~~~t~~~gt~~Y~APE~l~~~---~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~ 256 (599)
... .....+||+.|+|||++... ...++.++||||+||++|+|++|+.||.+.+..+.+..|....
T Consensus 156 ~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~i~~~~--------- 224 (331)
T cd05597 156 GTV--QSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHK--------- 224 (331)
T ss_pred CCc--cccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHHHHHcCC---------
Confidence 211 11234689999999998531 1457889999999999999999999998876555444332110
Q ss_pred HHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHH
Q 007541 257 RVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLE 336 (599)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~ 336 (599)
....+....+..++.+.+||+
T Consensus 225 -----------------------------------------------------------~~~~~~~~~~~~~~~~~~li~ 245 (331)
T cd05597 225 -----------------------------------------------------------EHFQFPPDVTDVSEEAKDLIR 245 (331)
T ss_pred -----------------------------------------------------------CcccCCCccCCCCHHHHHHHH
Confidence 011122223457889999999
Q ss_pred HhcccCCCC--CCCHHHHhcCccccCc
Q 007541 337 RMLAFEPKD--RPTAEEALADPYFKGL 361 (599)
Q Consensus 337 ~mL~~DP~~--RpTa~e~L~HP~f~~~ 361 (599)
+||..++++ |++++++|+||||.++
T Consensus 246 ~ll~~~~~r~~r~~~~~~l~hp~~~~~ 272 (331)
T cd05597 246 RLICSPETRLGRNGLQDFKDHPFFEGI 272 (331)
T ss_pred HHccCcccccCCCCHHHHhcCCCCCCC
Confidence 999765554 7899999999999864
No 112
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=2.4e-43 Score=368.75 Aligned_cols=250 Identities=24% Similarity=0.404 Sum_probs=205.3
Q ss_pred EEEeecCceEEEEEEECCCCcEEEEEEecCccc-ChhhHHHHHHHHHHHHhc-CCCCccccceeecCCCcCCCccEEEEE
Q 007541 29 EVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFE-HVSDATRILREIKLLRLL-RHPDIVEIKHILLPPSRREFKDIYVVF 106 (599)
Q Consensus 29 ~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~-~~~~~~~i~rEi~iL~~l-~HpnIv~l~~v~~~~s~~~~~~iylV~ 106 (599)
++||+|+||.||+|.++.+|+.||||+++.... .......+..|..++..+ +||||+++++++.. ..++|+||
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~-----~~~~~lv~ 75 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQT-----KEHLFFVM 75 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEe-----CCEEEEEE
Confidence 469999999999999999999999999975322 122345567788888755 79999999999843 35899999
Q ss_pred ecCC-cCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCCCCCccc
Q 007541 107 ELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIF 185 (599)
Q Consensus 107 E~~~-g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~~~~~~ 185 (599)
||+. ++|.+++...+.+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++...... ..
T Consensus 76 E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~---~~ 152 (316)
T cd05620 76 EFLNGGDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGD---NR 152 (316)
T ss_pred CCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEeCccCCCeecccCC---Cc
Confidence 9998 5999999888889999999999999999999999999999999999999999999999999987432111 12
Q ss_pred ccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHhhhhhhh
Q 007541 186 WTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVCLLLNII 265 (599)
Q Consensus 186 ~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~~~~~~~ 265 (599)
....+||..|+|||++.+ ..++.++||||+||++|+|++|+.||.+.+....+..+...
T Consensus 153 ~~~~~gt~~y~aPE~~~~--~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~~~~------------------- 211 (316)
T cd05620 153 ASTFCGTPDYIAPEILQG--LKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRVD------------------- 211 (316)
T ss_pred eeccCCCcCccCHHHHcC--CCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhC-------------------
Confidence 245679999999999976 67999999999999999999999999877654433322110
Q ss_pred hcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCC
Q 007541 266 WCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKD 345 (599)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL~~DP~~ 345 (599)
. .......+..+.+||++||+.||.+
T Consensus 212 --------------------------------------------------~----~~~~~~~~~~~~~li~~~l~~dP~~ 237 (316)
T cd05620 212 --------------------------------------------------T----PHYPRWITKESKDILEKLFERDPTR 237 (316)
T ss_pred --------------------------------------------------C----CCCCCCCCHHHHHHHHHHccCCHHH
Confidence 0 0011236788999999999999999
Q ss_pred CCCH-HHHhcCccccCc
Q 007541 346 RPTA-EEALADPYFKGL 361 (599)
Q Consensus 346 RpTa-~e~L~HP~f~~~ 361 (599)
|+++ +++++||||+..
T Consensus 238 R~~~~~~~~~h~~f~~~ 254 (316)
T cd05620 238 RLGVVGNIRGHPFFKTI 254 (316)
T ss_pred cCCChHHHHcCCCcCCC
Confidence 9998 588999999875
No 113
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=100.00 E-value=6.9e-43 Score=361.54 Aligned_cols=295 Identities=36% Similarity=0.639 Sum_probs=232.0
Q ss_pred CCCCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCc---
Q 007541 20 GEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSR--- 96 (599)
Q Consensus 20 ~~~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~--- 96 (599)
..-++|++.+.||+|+||.||+|.++.+++.||||++............+.+|+.+|+.++|+||+++++++.....
T Consensus 5 ~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 84 (311)
T cd07866 5 SKLRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSK 84 (311)
T ss_pred cccccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccc
Confidence 44689999999999999999999999999999999986533332233456789999999999999999998765432
Q ss_pred CCCccEEEEEecCCcCHHHHHHhC-CCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCcccc
Q 007541 97 REFKDIYVVFELMESDLHQVIKAN-DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARV 175 (599)
Q Consensus 97 ~~~~~iylV~E~~~g~L~~~i~~~-~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~ 175 (599)
.....+|+|+||+.++|.+.+... ..+++..++.++.||++||.|||++||+|+||||+|||++.++.+||+|||+++.
T Consensus 85 ~~~~~~~lv~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~ 164 (311)
T cd07866 85 RKRGSVYMVTPYMDHDLSGLLENPSVKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILIDNQGILKIADFGLARP 164 (311)
T ss_pred ccCceEEEEEecCCcCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECcCccchh
Confidence 234578999999999998888653 4799999999999999999999999999999999999999999999999999986
Q ss_pred ccCCCCC--------cccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhc
Q 007541 176 AFNDTPT--------AIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLL 247 (599)
Q Consensus 176 ~~~~~~~--------~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~l 247 (599)
....... ....+...+++.|+|||++.+. ..++.++||||+|||+++|++|+++|.+.+....+..+....
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~ 243 (311)
T cd07866 165 YDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGE-RRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFKLC 243 (311)
T ss_pred ccCCCcccccCCcccccccccceeccCcCChHHhhCC-CccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHh
Confidence 5332211 1122445678999999987542 468899999999999999999999999999999999999988
Q ss_pred CCCCHHHHHHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCC
Q 007541 248 GTPSPEAIARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNA 327 (599)
Q Consensus 248 G~p~~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (599)
+.+.+..+.. |........ .......+......+...
T Consensus 244 ~~~~~~~~~~--------~~~~~~~~~-----------------------------------~~~~~~~~~~~~~~~~~~ 280 (311)
T cd07866 244 GTPTEETWPG--------WRSLPGCEG-----------------------------------VHSFTNYPRTLEERFGKL 280 (311)
T ss_pred CCCChhhchh--------hhhcccccc-----------------------------------cccCCCCCccHHHHcccC
Confidence 8887765433 100000000 000001111122234456
Q ss_pred CHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 007541 328 NPLALRLLERMLAFEPKDRPTAEEALADPYF 358 (599)
Q Consensus 328 s~~a~dLL~~mL~~DP~~RpTa~e~L~HP~f 358 (599)
++.+.+||.+||..||.+|||+.|+|.||||
T Consensus 281 ~~~~~~~i~~~l~~~p~~R~t~~ell~~~~f 311 (311)
T cd07866 281 GPEGLDLLSKLLSLDPYKRLTASDALEHPYF 311 (311)
T ss_pred ChhHHHHHHHHcccCcccCcCHHHHhcCCCC
Confidence 6789999999999999999999999999998
No 114
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=1.8e-43 Score=355.80 Aligned_cols=258 Identities=35% Similarity=0.606 Sum_probs=213.1
Q ss_pred eEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEEE
Q 007541 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYV 104 (599)
Q Consensus 25 Y~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~iyl 104 (599)
|++++.||+|+||+||+|.+..+++.||+|++..............+|+.+++.++|+||+++++++.. ...+|+
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~-----~~~~~~ 75 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQD-----DNYLYI 75 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEE-----SSEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhccccccccccccccccccc-----cccccc
Confidence 899999999999999999999999999999998654433344445679999999999999999999954 457999
Q ss_pred EEecCCc-CHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCCCCCc
Q 007541 105 VFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTA 183 (599)
Q Consensus 105 V~E~~~g-~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~~~~ 183 (599)
|||++.+ +|.+++...+.+++..+..++.||++||.+||++||+|+||||+|||++.++.++|+|||++...... .
T Consensus 76 v~~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~---~ 152 (260)
T PF00069_consen 76 VMEYCPGGSLQDYLQKNKPLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILLDENGEVKLIDFGSSVKLSEN---N 152 (260)
T ss_dssp EEEEETTEBHHHHHHHHSSBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEESTTSEEEESSGTTTEESTST---T
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc---c
Confidence 9999997 99999997778999999999999999999999999999999999999999999999999999754111 1
Q ss_pred ccccccccCccccCccccc-cccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHhhhh
Q 007541 184 IFWTDYVATRWYRAPELCG-SFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVCLLL 262 (599)
Q Consensus 184 ~~~t~~~gt~~Y~APE~l~-~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~~~~ 262 (599)
.......++..|+|||++. + ..++.++|||||||++++|++|..||...+..+....+.+.+.......
T Consensus 153 ~~~~~~~~~~~y~aPE~~~~~--~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~-------- 222 (260)
T PF00069_consen 153 ENFNPFVGTPEYMAPEVLQQG--KKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRPLPSS-------- 222 (260)
T ss_dssp SEBSSSSSSGGGSCHHHHTTT--SSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHHH--------
T ss_pred ccccccccccccccccccccc--ccccccccccccccccccccccccccccccchhhhhhhhhccccccccc--------
Confidence 2235668899999999987 4 6889999999999999999999999988755555544443322111100
Q ss_pred hhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHhcccC
Q 007541 263 NIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFE 342 (599)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL~~D 342 (599)
.. ........+.+||++||+.|
T Consensus 223 -------------------------------------------------~~---------~~~~~~~~l~~li~~~l~~~ 244 (260)
T PF00069_consen 223 -------------------------------------------------SQ---------QSREKSEELRDLIKKMLSKD 244 (260)
T ss_dssp -------------------------------------------------TT---------SHTTSHHHHHHHHHHHSSSS
T ss_pred -------------------------------------------------cc---------ccchhHHHHHHHHHHHccCC
Confidence 00 00011267899999999999
Q ss_pred CCCCCCHHHHhcCccc
Q 007541 343 PKDRPTAEEALADPYF 358 (599)
Q Consensus 343 P~~RpTa~e~L~HP~f 358 (599)
|++|||+.++|+||||
T Consensus 245 p~~R~~~~~l~~~~~~ 260 (260)
T PF00069_consen 245 PEQRPSAEELLKHPWF 260 (260)
T ss_dssp GGGSTTHHHHHTSGGG
T ss_pred hhHCcCHHHHhcCCCC
Confidence 9999999999999998
No 115
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=2.3e-43 Score=369.70 Aligned_cols=250 Identities=27% Similarity=0.468 Sum_probs=205.7
Q ss_pred EEEeecCceEEEEEEECCCCcEEEEEEecCccc-ChhhHHHHHHHHH-HHHhcCCCCccccceeecCCCcCCCccEEEEE
Q 007541 29 EVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFE-HVSDATRILREIK-LLRLLRHPDIVEIKHILLPPSRREFKDIYVVF 106 (599)
Q Consensus 29 ~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~-~~~~~~~i~rEi~-iL~~l~HpnIv~l~~v~~~~s~~~~~~iylV~ 106 (599)
+.||+|+||+||+|.++.+|+.||||++..... .......+.+|.. +++.++||||+++++++.. ...+|+||
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~-----~~~~~lv~ 75 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQT-----ADKLYFVL 75 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEe-----CCEEEEEE
Confidence 469999999999999999999999999864321 2233455666666 4678999999999999843 35799999
Q ss_pred ecCC-cCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCCCCCccc
Q 007541 107 ELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIF 185 (599)
Q Consensus 107 E~~~-g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~~~~~~ 185 (599)
||+. ++|..++..++.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++....... .
T Consensus 76 e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~---~ 152 (323)
T cd05575 76 DYVNGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSK---T 152 (323)
T ss_pred cCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeccCCCcccccCCC---c
Confidence 9999 59999998888899999999999999999999999999999999999999999999999999875322111 1
Q ss_pred ccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHhhhhhhh
Q 007541 186 WTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVCLLLNII 265 (599)
Q Consensus 186 ~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~~~~~~~ 265 (599)
....+||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+..+....+..
T Consensus 153 ~~~~~gt~~y~aPE~~~~--~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~-------------------- 210 (323)
T cd05575 153 TSTFCGTPEYLAPEVLRK--QPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILN-------------------- 210 (323)
T ss_pred cccccCChhhcChhhhcC--CCCCccccccccchhhhhhhcCCCCCCCCCHHHHHHHHHc--------------------
Confidence 234578999999999876 6789999999999999999999999988765443333221
Q ss_pred hcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCC
Q 007541 266 WCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKD 345 (599)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL~~DP~~ 345 (599)
.. ....+..++.+.+||++||+.||.+
T Consensus 211 --------------------------------------------------~~---~~~~~~~~~~~~~li~~~l~~~p~~ 237 (323)
T cd05575 211 --------------------------------------------------KP---LRLKPNISVSARHLLEGLLQKDRTK 237 (323)
T ss_pred --------------------------------------------------CC---CCCCCCCCHHHHHHHHHHhhcCHHh
Confidence 00 0122456888999999999999999
Q ss_pred CCCH----HHHhcCccccCc
Q 007541 346 RPTA----EEALADPYFKGL 361 (599)
Q Consensus 346 RpTa----~e~L~HP~f~~~ 361 (599)
|+++ .|+|+||||..+
T Consensus 238 R~~~~~~~~~il~~~~~~~~ 257 (323)
T cd05575 238 RLGAKDDFLEIKNHVFFSSI 257 (323)
T ss_pred CCCCCCCHHHHHcCCCcCCC
Confidence 9997 699999999764
No 116
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.5e-44 Score=345.72 Aligned_cols=259 Identities=25% Similarity=0.370 Sum_probs=223.9
Q ss_pred ccCCCCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCccc-ChhhHHHHHHHHHHHHhcCCCCccccceeecCCCc
Q 007541 18 EYGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFE-HVSDATRILREIKLLRLLRHPDIVEIKHILLPPSR 96 (599)
Q Consensus 18 ~~~~~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~-~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~ 96 (599)
....-++|++.+.||+|.||.||+|+.++++-.||+|++.+... .......+.||+.|-..|+||||++++++|.+.
T Consensus 17 ~~~~l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~-- 94 (281)
T KOG0580|consen 17 KTWTLDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDS-- 94 (281)
T ss_pred cccchhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheecc--
Confidence 34566889999999999999999999999999999999875432 223345678999999999999999999999554
Q ss_pred CCCccEEEEEecCC-cCHHHHHH--hCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCcc
Q 007541 97 REFKDIYVVFELME-SDLHQVIK--ANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLA 173 (599)
Q Consensus 97 ~~~~~iylV~E~~~-g~L~~~i~--~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA 173 (599)
..+||++||.. |+|+..+. ....+++.....+++|++.||.|||.++|+||||||+|+|+..++.+||+|||.+
T Consensus 95 ---~riyLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg~~~~lkiAdfGws 171 (281)
T KOG0580|consen 95 ---KRIYLILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLLGSAGELKIADFGWS 171 (281)
T ss_pred ---ceeEEEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhccCCCCCeeccCCCce
Confidence 47999999999 79999998 4568999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHH
Q 007541 174 RVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPE 253 (599)
Q Consensus 174 ~~~~~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e 253 (599)
....+. .-...|||..|.+||...+ ..++..+|+|++|++.||+|.|.+||...+..+.+.+|.+.--..
T Consensus 172 V~~p~~-----kR~tlcgt~dyl~pEmv~~--~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI~k~~~~~--- 241 (281)
T KOG0580|consen 172 VHAPSN-----KRKTLCGTLDYLPPEMVEG--RGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKRIRKVDLKF--- 241 (281)
T ss_pred eecCCC-----CceeeecccccCCHhhcCC--CCccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHHHHccccC---
Confidence 764211 1245699999999999987 789999999999999999999999999888777776665421110
Q ss_pred HHHHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHH
Q 007541 254 AIARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALR 333 (599)
Q Consensus 254 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~d 333 (599)
-..++..|.|
T Consensus 242 ----------------------------------------------------------------------p~~is~~a~d 251 (281)
T KOG0580|consen 242 ----------------------------------------------------------------------PSTISGGAAD 251 (281)
T ss_pred ----------------------------------------------------------------------CcccChhHHH
Confidence 1457889999
Q ss_pred HHHHhcccCCCCCCCHHHHhcCccccCc
Q 007541 334 LLERMLAFEPKDRPTAEEALADPYFKGL 361 (599)
Q Consensus 334 LL~~mL~~DP~~RpTa~e~L~HP~f~~~ 361 (599)
||.+||..+|.+|.+..|++.|||+...
T Consensus 252 lI~~ll~~~p~~r~~l~~v~~hpwI~a~ 279 (281)
T KOG0580|consen 252 LISRLLVKNPIERLALTEVMDHPWIVAN 279 (281)
T ss_pred HHHHHhccCccccccHHHHhhhHHHHhc
Confidence 9999999999999999999999998753
No 117
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=3.9e-43 Score=367.25 Aligned_cols=250 Identities=26% Similarity=0.453 Sum_probs=204.9
Q ss_pred EEEeecCceEEEEEEECCCCcEEEEEEecCccc-ChhhHHHHHHHHHHHHhc-CCCCccccceeecCCCcCCCccEEEEE
Q 007541 29 EVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFE-HVSDATRILREIKLLRLL-RHPDIVEIKHILLPPSRREFKDIYVVF 106 (599)
Q Consensus 29 ~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~-~~~~~~~i~rEi~iL~~l-~HpnIv~l~~v~~~~s~~~~~~iylV~ 106 (599)
++||+|+||+||+|.+..+++.||||+++.... .......+..|..++..+ +||||+++++++.. ...+|+||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~-----~~~~~lv~ 75 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQT-----KEHLFFVM 75 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEc-----CCEEEEEE
Confidence 469999999999999999999999999975322 223345566777777654 79999999999843 34799999
Q ss_pred ecCC-cCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCCCCCccc
Q 007541 107 ELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIF 185 (599)
Q Consensus 107 E~~~-g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~~~~~~ 185 (599)
||++ ++|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++...... ..
T Consensus 76 e~~~gg~L~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~---~~ 152 (316)
T cd05592 76 EYLNGGDLMFHIQSSGRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGE---GK 152 (316)
T ss_pred cCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCC---Cc
Confidence 9998 6999999888889999999999999999999999999999999999999999999999999997543222 12
Q ss_pred ccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHhhhhhhh
Q 007541 186 WTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVCLLLNII 265 (599)
Q Consensus 186 ~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~~~~~~~ 265 (599)
....+||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+....+..+...
T Consensus 153 ~~~~~gt~~y~aPE~~~~--~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~------------------- 211 (316)
T cd05592 153 ASTFCGTPDYIAPEILKG--QKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILND------------------- 211 (316)
T ss_pred cccccCCccccCHHHHcC--CCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcC-------------------
Confidence 245579999999999876 67899999999999999999999999987755443333210
Q ss_pred hcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCC
Q 007541 266 WCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKD 345 (599)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL~~DP~~ 345 (599)
.+ ......+..+.+||.+||+.||.+
T Consensus 212 --------------------------------------------------~~----~~~~~~~~~~~~ll~~~l~~~P~~ 237 (316)
T cd05592 212 --------------------------------------------------RP----HFPRWISKEAKDCLSKLFERDPTK 237 (316)
T ss_pred --------------------------------------------------CC----CCCCCCCHHHHHHHHHHccCCHHH
Confidence 00 011236778999999999999999
Q ss_pred CCCH-HHHhcCccccCc
Q 007541 346 RPTA-EEALADPYFKGL 361 (599)
Q Consensus 346 RpTa-~e~L~HP~f~~~ 361 (599)
|+++ .++++||||...
T Consensus 238 R~~~~~~l~~h~~~~~~ 254 (316)
T cd05592 238 RLGVDGDIRQHPFFRGI 254 (316)
T ss_pred cCCChHHHHcCcccCCC
Confidence 9986 588899999864
No 118
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=9e-43 Score=359.09 Aligned_cols=287 Identities=39% Similarity=0.671 Sum_probs=228.9
Q ss_pred CceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccE
Q 007541 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDI 102 (599)
Q Consensus 23 ~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~i 102 (599)
++|++.+.||.|++|+||+|.++.+|+.||||++............+.+|+.+++.++|+||+++++++.. ...+
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~ 76 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHS-----EKRL 76 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEec-----CCeE
Confidence 57999999999999999999999999999999986543333334567789999999999999999999843 3579
Q ss_pred EEEEecCCcCHHHHHHhCC--CCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCC-CCceeeeccCccccccCC
Q 007541 103 YVVFELMESDLHQVIKAND--DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANA-DCKLKICDFGLARVAFND 179 (599)
Q Consensus 103 ylV~E~~~g~L~~~i~~~~--~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~-~~~lKL~DFGlA~~~~~~ 179 (599)
|+||||++++|.+.+.... .+++..++.++.||+.||+|||++||+|+||+|+|||++. ++.+||+|||++......
T Consensus 77 ~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~ 156 (294)
T PLN00009 77 YLVFEYLDLDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIP 156 (294)
T ss_pred EEEEecccccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEECCCCEEEEcccccccccCCC
Confidence 9999999999999887654 3578899999999999999999999999999999999985 567999999999765332
Q ss_pred CCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHh
Q 007541 180 TPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVC 259 (599)
Q Consensus 180 ~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~ 259 (599)
.. ..+...++..|+|||.+.+. ..++.++||||+||++++|++|++||.+.+..+.+.++...++.+....|...
T Consensus 157 ~~---~~~~~~~~~~y~~PE~~~~~-~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~- 231 (294)
T PLN00009 157 VR---TFTHEVVTLWYRAPEILLGS-RHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGV- 231 (294)
T ss_pred cc---ccccCceeecccCHHHHhCC-CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhcccc-
Confidence 11 12345678999999987552 45789999999999999999999999998888888888888888876544320
Q ss_pred hhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHhc
Q 007541 260 LLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERML 339 (599)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL 339 (599)
.. ...+................+..++.+.+||.+||
T Consensus 232 ----------~~---------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l 268 (294)
T PLN00009 232 ----------TS---------------------------------LPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKML 268 (294)
T ss_pred ----------cc---------------------------------chhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHc
Confidence 00 00010111111111222234567889999999999
Q ss_pred ccCCCCCCCHHHHhcCccccCcc
Q 007541 340 AFEPKDRPTAEEALADPYFKGLA 362 (599)
Q Consensus 340 ~~DP~~RpTa~e~L~HP~f~~~~ 362 (599)
+.||++|||+.++|+||||.++.
T Consensus 269 ~~~P~~Rps~~~~l~~~~~~~~~ 291 (294)
T PLN00009 269 RLDPSKRITARAALEHEYFKDLG 291 (294)
T ss_pred cCChhhCcCHHHHhcCchHhHHh
Confidence 99999999999999999999764
No 119
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=1.5e-42 Score=354.89 Aligned_cols=281 Identities=41% Similarity=0.691 Sum_probs=229.5
Q ss_pred eEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEEE
Q 007541 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYV 104 (599)
Q Consensus 25 Y~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~iyl 104 (599)
|++.+.||.|++|.||+|.++.+|..||||++............+.+|+.+++.++|+|++++++++.. ....|+
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~-----~~~~~i 75 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHS-----ENKLYL 75 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheecc-----CCeEEE
Confidence 678999999999999999999999999999987543333334567789999999999999999999853 357999
Q ss_pred EEecCCcCHHHHHHhCC--CCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCCCCC
Q 007541 105 VFELMESDLHQVIKAND--DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPT 182 (599)
Q Consensus 105 V~E~~~g~L~~~i~~~~--~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~~~ 182 (599)
||||++++|.+++.... .+++..+..++.||++||.|||+.|++||||+|+|||++.++.++|+|||+++.......
T Consensus 76 v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~- 154 (283)
T cd07835 76 VFEFLDLDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVR- 154 (283)
T ss_pred EEeccCcCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCcEEEeecccccccCCCcc-
Confidence 99999999999998765 789999999999999999999999999999999999999999999999999975432211
Q ss_pred cccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHhhhh
Q 007541 183 AIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVCLLL 262 (599)
Q Consensus 183 ~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~~~~ 262 (599)
......++..|+|||++.+. ..++.++||||+||++++|++|++||.+.+....+..+.+.+++|..+.+.......
T Consensus 155 --~~~~~~~~~~~~aPE~~~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (283)
T cd07835 155 --TYTHEVVTLWYRAPEILLGS-RQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLP 231 (283)
T ss_pred --ccCccccccCCCCCceeecC-cccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhch
Confidence 12334568899999987552 457889999999999999999999999999888888888888888876654421111
Q ss_pred hhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHhcccC
Q 007541 263 NIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFE 342 (599)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL~~D 342 (599)
++................+..+..+.+||.+||+.|
T Consensus 232 --------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~ 267 (283)
T cd07835 232 --------------------------------------------DYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYD 267 (283)
T ss_pred --------------------------------------------hhhhhcccccccchhhhcCCCCHHHHHHHHHHhcCC
Confidence 111111122222233345678889999999999999
Q ss_pred CCCCCCHHHHhcCccc
Q 007541 343 PKDRPTAEEALADPYF 358 (599)
Q Consensus 343 P~~RpTa~e~L~HP~f 358 (599)
|.+|||++|+|+||||
T Consensus 268 P~~Rpt~~~il~~~~~ 283 (283)
T cd07835 268 PAKRISAKAALQHPYF 283 (283)
T ss_pred hhhCcCHHHHhcCCCC
Confidence 9999999999999998
No 120
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=7.4e-43 Score=371.47 Aligned_cols=279 Identities=25% Similarity=0.341 Sum_probs=208.9
Q ss_pred CCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCcc
Q 007541 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKD 101 (599)
Q Consensus 22 ~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~ 101 (599)
...|++++.||+|+||.||+|.+..+++.||+|+.... ....|+.+|+.++|+||+++++++... ..
T Consensus 65 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~--------~~~~E~~~l~~l~h~~iv~~~~~~~~~-----~~ 131 (357)
T PHA03209 65 SLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG--------TTLIEAMLLQNVNHPSVIRMKDTLVSG-----AI 131 (357)
T ss_pred hcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc--------ccHHHHHHHHhCCCCCCcChhheEEeC-----Ce
Confidence 45799999999999999999999999999999975421 234799999999999999999998543 46
Q ss_pred EEEEEecCCcCHHHHHHhC-CCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCCC
Q 007541 102 IYVVFELMESDLHQVIKAN-DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT 180 (599)
Q Consensus 102 iylV~E~~~g~L~~~i~~~-~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~ 180 (599)
.|+|||++.++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++......
T Consensus 132 ~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 211 (357)
T PHA03209 132 TCMVLPHYSSDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVAP 211 (357)
T ss_pred eEEEEEccCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEecCccccccccCc
Confidence 8999999999999988754 579999999999999999999999999999999999999999999999999997532211
Q ss_pred CCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhC-CCCCCCCCh---------hhHHHHHHHhcCCC
Q 007541 181 PTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTG-KPLFPGKNV---------VHQLDIMTDLLGTP 250 (599)
Q Consensus 181 ~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG-~~pF~g~~~---------~~~l~~I~~~lG~p 250 (599)
......||..|+|||++.+ ..|+.++|||||||++|+|+++ .++|.+... ..++..+...+|..
T Consensus 212 ----~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 285 (357)
T PHA03209 212 ----AFLGLAGTVETNAPEVLAR--DKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVH 285 (357)
T ss_pred ----ccccccccccccCCeecCC--CCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccC
Confidence 1234578999999999977 6799999999999999999985 455544221 23344444444433
Q ss_pred CHHHHHHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhccc-CCCCCCCC--CCCCC
Q 007541 251 SPEAIARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRK-KKPIPFSQ--KFPNA 327 (599)
Q Consensus 251 ~~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~ 327 (599)
+.+.... ........++..... +.+..... ...+.
T Consensus 286 ~~~~~~~------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (357)
T PHA03209 286 PEEFPRD------------------------------------------PGSRLVRGFIEYASLERQPYTRYPCFQRVNL 323 (357)
T ss_pred hhhcCCC------------------------------------------CccHHHHHHHhhcccCCCcccccHHHhccCC
Confidence 3221000 000011111110000 00000000 01245
Q ss_pred CHHHHHHHHHhcccCCCCCCCHHHHhcCccccCc
Q 007541 328 NPLALRLLERMLAFEPKDRPTAEEALADPYFKGL 361 (599)
Q Consensus 328 s~~a~dLL~~mL~~DP~~RpTa~e~L~HP~f~~~ 361 (599)
+..+.+||.+||++||.+||||.|+|+||||+.+
T Consensus 324 ~~~~~~li~~mL~~dP~~Rpta~e~l~hp~f~~~ 357 (357)
T PHA03209 324 PIDGEFLVHKMLTFDAAMRPSAEEILNYPMFAQL 357 (357)
T ss_pred CchHHHHHHHHHcCCcccCcCHHHHhcCchhccC
Confidence 6778999999999999999999999999999863
No 121
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=4.8e-43 Score=368.59 Aligned_cols=259 Identities=23% Similarity=0.406 Sum_probs=204.6
Q ss_pred EEEeecCceEEEEEEECCCCcEEEEEEecCccc-ChhhHHHHHHHHHHHHhc-CCCCccccceeecCCCcCCCccEEEEE
Q 007541 29 EVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFE-HVSDATRILREIKLLRLL-RHPDIVEIKHILLPPSRREFKDIYVVF 106 (599)
Q Consensus 29 ~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~-~~~~~~~i~rEi~iL~~l-~HpnIv~l~~v~~~~s~~~~~~iylV~ 106 (599)
++||+|+||.||+|.+..+++.||||+++.... .......+.+|+.+++.+ +||||+++++++... ..+|+||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~-----~~~~lv~ 75 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTE-----SRLFFVI 75 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcC-----CEEEEEE
Confidence 469999999999999999999999999975432 223445678999999888 699999999998443 4799999
Q ss_pred ecCC-cCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCCCCCccc
Q 007541 107 ELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIF 185 (599)
Q Consensus 107 E~~~-g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~~~~~~ 185 (599)
||++ ++|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++....... .
T Consensus 76 e~~~~g~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~---~ 152 (329)
T cd05588 76 EFVSGGDLMFHMQRQRKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGD---T 152 (329)
T ss_pred eCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEECcCccccccccCCC---c
Confidence 9998 59999998888899999999999999999999999999999999999999999999999999975322111 1
Q ss_pred ccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHhhhhhhh
Q 007541 186 WTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVCLLLNII 265 (599)
Q Consensus 186 ~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~~~~~~~ 265 (599)
....+||..|+|||++.+ ..++.++||||+||++|+|++|+.||......+ .+....
T Consensus 153 ~~~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~----------~~~~~~----------- 209 (329)
T cd05588 153 TSTFCGTPNYIAPEILRG--EDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSD----------NPDQNT----------- 209 (329)
T ss_pred cccccCCccccCHHHHcC--CCCCCccceechHHHHHHHHHCCCCcccccccc----------cccccc-----------
Confidence 234689999999999876 678999999999999999999999996422110 000000
Q ss_pred hcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCC
Q 007541 266 WCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKD 345 (599)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL~~DP~~ 345 (599)
..... +.+.. .... ....+++.+.+||.+||+.||.+
T Consensus 210 ------------------------------------~~~~~---~~~~~-~~~~---~p~~~~~~~~~li~~~L~~dP~~ 246 (329)
T cd05588 210 ------------------------------------EDYLF---QVILE-KQIR---IPRSLSVKASSVLKGFLNKDPKE 246 (329)
T ss_pred ------------------------------------hHHHH---HHHHc-CCCC---CCCCCCHHHHHHHHHHhccCHHH
Confidence 00000 00000 1111 12346788999999999999999
Q ss_pred CCC------HHHHhcCccccCc
Q 007541 346 RPT------AEEALADPYFKGL 361 (599)
Q Consensus 346 RpT------a~e~L~HP~f~~~ 361 (599)
|+| ++|+++||||..+
T Consensus 247 R~~~~~~~~~~~i~~hp~~~~~ 268 (329)
T cd05588 247 RLGCHPQTGFRDIKSHPFFRNI 268 (329)
T ss_pred cCCCCCCCCHHHHhcCCCCCCC
Confidence 987 7999999999764
No 122
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.5e-43 Score=362.84 Aligned_cols=263 Identities=27% Similarity=0.415 Sum_probs=222.2
Q ss_pred CCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCccc-ChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCc
Q 007541 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFE-HVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFK 100 (599)
Q Consensus 22 ~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~-~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~ 100 (599)
-+.|++++.||.|.-|+||+|..+.++..+|+|++.+... ......|+..|-.||..+.||.+..|+..|. ...
T Consensus 76 l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fe-----t~~ 150 (459)
T KOG0610|consen 76 LRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFE-----TDK 150 (459)
T ss_pred HHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheee-----ccc
Confidence 4678899999999999999999999999999999986443 2445678889999999999999999999994 446
Q ss_pred cEEEEEecCC-cCHHHHHHhC--CCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCcccccc
Q 007541 101 DIYVVFELME-SDLHQVIKAN--DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAF 177 (599)
Q Consensus 101 ~iylV~E~~~-g~L~~~i~~~--~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~ 177 (599)
.+|+|||||. |+|+.+++.. +.+++..+++|+..|+.||+|||-.|||.|||||+||||.++|+|.|+||.|+....
T Consensus 151 ~~cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPENILvredGHIMLsDFDLS~~~~ 230 (459)
T KOG0610|consen 151 YSCLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPENILVREDGHIMLSDFDLSLRCP 230 (459)
T ss_pred eeEEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcceeEEecCCcEEeeeccccccCC
Confidence 8999999999 6999998764 479999999999999999999999999999999999999999999999999975321
Q ss_pred C---------------------------------C-C-------------------CCcccccccccCccccCccccccc
Q 007541 178 N---------------------------------D-T-------------------PTAIFWTDYVATRWYRAPELCGSF 204 (599)
Q Consensus 178 ~---------------------------------~-~-------------------~~~~~~t~~~gt~~Y~APE~l~~~ 204 (599)
- . . +........|||-.|.|||+|.+
T Consensus 231 ~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G- 309 (459)
T KOG0610|consen 231 VSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRG- 309 (459)
T ss_pred CCCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeec-
Confidence 0 0 0 00112235789999999999988
Q ss_pred cCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHhhhhhhhhcCCCCCcccCCCccchhh
Q 007541 205 FSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVCLLLNIIWCGYDGFMCSVAPSCFLVF 284 (599)
Q Consensus 205 ~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (599)
...+.++|.|+||+++||||.|..||.|.+..+.+..|. +.+
T Consensus 310 -~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv---~~~---------------------------------- 351 (459)
T KOG0610|consen 310 -EGHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIV---GQP---------------------------------- 351 (459)
T ss_pred -CCCCchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHh---cCC----------------------------------
Confidence 688999999999999999999999999999877766554 211
Q ss_pred hhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCC----HHHHhcCccccC
Q 007541 285 AIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPT----AEEALADPYFKG 360 (599)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL~~DP~~RpT----a~e~L~HP~f~~ 360 (599)
..|.. .+.++..|+|||+++|..||.+|+. |+||-+||||++
T Consensus 352 ---------------------------------l~Fp~-~~~vs~~akDLIr~LLvKdP~kRlg~~rGA~eIK~HpFF~g 397 (459)
T KOG0610|consen 352 ---------------------------------LKFPE-EPEVSSAAKDLIRKLLVKDPSKRLGSKRGAAEIKRHPFFEG 397 (459)
T ss_pred ---------------------------------CcCCC-CCcchhHHHHHHHHHhccChhhhhccccchHHhhcCccccC
Confidence 11111 1356788999999999999999998 999999999999
Q ss_pred cc
Q 007541 361 LA 362 (599)
Q Consensus 361 ~~ 362 (599)
+.
T Consensus 398 Vn 399 (459)
T KOG0610|consen 398 VN 399 (459)
T ss_pred CC
Confidence 74
No 123
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=1.3e-43 Score=370.60 Aligned_cols=251 Identities=27% Similarity=0.449 Sum_probs=208.5
Q ss_pred EEEEeecCceEEEEEEE---CCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEEE
Q 007541 28 EEVIGKGSYGVVCSAYD---TRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYV 104 (599)
Q Consensus 28 ~~~LG~G~~g~V~~a~d---~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~iyl 104 (599)
++.||+|+||.||++++ ..+|+.||+|++...........++.+|+.+|+.++||||+++++++.. ...+|+
T Consensus 1 l~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-----~~~~~l 75 (318)
T cd05582 1 LKVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQT-----EGKLYL 75 (318)
T ss_pred CceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEc-----CCEEEE
Confidence 36799999999999986 4578999999997543333345567789999999999999999999843 357999
Q ss_pred EEecCC-cCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCCCCCc
Q 007541 105 VFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTA 183 (599)
Q Consensus 105 V~E~~~-g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~~~~ 183 (599)
||||+. ++|.+++.....+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||+++.......
T Consensus 76 v~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~-- 153 (318)
T cd05582 76 ILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEK-- 153 (318)
T ss_pred EEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEECCCCcEEEeeccCCcccCCCCC--
Confidence 999998 69999998888899999999999999999999999999999999999999999999999999976433211
Q ss_pred ccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHhhhhh
Q 007541 184 IFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVCLLLN 263 (599)
Q Consensus 184 ~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~~~~~ 263 (599)
.....+||..|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+....+..+....
T Consensus 154 -~~~~~~g~~~y~aPE~~~~--~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i~~~~---------------- 214 (318)
T cd05582 154 -KAYSFCGTVEYMAPEVVNR--RGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILKAK---------------- 214 (318)
T ss_pred -ceecccCChhhcCHHHHcC--CCCCCccceeccceEeeeeccCCCCCCCCCHHHHHHHHHcCC----------------
Confidence 1234578999999999876 678899999999999999999999998876554443332100
Q ss_pred hhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHhcccCC
Q 007541 264 IIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEP 343 (599)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL~~DP 343 (599)
. ......++.+.+||++||+.||
T Consensus 215 ------------------------------------------------------~---~~p~~~~~~~~~li~~~l~~~P 237 (318)
T cd05582 215 ------------------------------------------------------L---GMPQFLSPEAQSLLRALFKRNP 237 (318)
T ss_pred ------------------------------------------------------C---CCCCCCCHHHHHHHHHHhhcCH
Confidence 0 1112467889999999999999
Q ss_pred CCCCC-----HHHHhcCccccCc
Q 007541 344 KDRPT-----AEEALADPYFKGL 361 (599)
Q Consensus 344 ~~RpT-----a~e~L~HP~f~~~ 361 (599)
.+||| +++++.||||..+
T Consensus 238 ~~R~~a~~~~~~~~~~~~~~~~~ 260 (318)
T cd05582 238 ANRLGAGPDGVEEIKRHPFFSTI 260 (318)
T ss_pred hHcCCCCCCCHHHHhCCCCcCCC
Confidence 99999 7889999999864
No 124
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=5.7e-43 Score=366.16 Aligned_cols=250 Identities=24% Similarity=0.441 Sum_probs=207.1
Q ss_pred EEEeecCceEEEEEEECCCCcEEEEEEecCcc-cChhhHHHHHHHHHHHHhc-CCCCccccceeecCCCcCCCccEEEEE
Q 007541 29 EVIGKGSYGVVCSAYDTRTGEKVAIKKINDIF-EHVSDATRILREIKLLRLL-RHPDIVEIKHILLPPSRREFKDIYVVF 106 (599)
Q Consensus 29 ~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~-~~~~~~~~i~rEi~iL~~l-~HpnIv~l~~v~~~~s~~~~~~iylV~ 106 (599)
+.||+|+||+||+|.++.+++.||||++++.. ........+.+|+.+++.+ +||||+++++++.. ...+|+||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~-----~~~~~lv~ 75 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQT-----KDRLFFVM 75 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEc-----CCEEEEEE
Confidence 46999999999999999999999999997532 1223455677899999888 69999999999843 34799999
Q ss_pred ecCC-cCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCCCCCccc
Q 007541 107 ELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIF 185 (599)
Q Consensus 107 E~~~-g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~~~~~~ 185 (599)
||+. ++|.+.+...+.+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||+++....... .
T Consensus 76 e~~~~~~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~---~ 152 (318)
T cd05570 76 EYVNGGDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGV---T 152 (318)
T ss_pred cCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEECCCCcEEecccCCCeecCcCCC---c
Confidence 9998 69999998888899999999999999999999999999999999999999999999999999875322111 1
Q ss_pred ccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHhhhhhhh
Q 007541 186 WTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVCLLLNII 265 (599)
Q Consensus 186 ~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~~~~~~~ 265 (599)
....++|..|+|||++.+ ..++.++||||+||++|+|++|+.||.+.+.......+...
T Consensus 153 ~~~~~g~~~y~aPE~~~~--~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~i~~~------------------- 211 (318)
T cd05570 153 TSTFCGTPDYIAPEILSY--QPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILED------------------- 211 (318)
T ss_pred ccceecCccccCHHHhcC--CCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHHHHcC-------------------
Confidence 234578999999999876 67899999999999999999999999877654433322110
Q ss_pred hcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCC
Q 007541 266 WCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKD 345 (599)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL~~DP~~ 345 (599)
.. ......++.+.+||++||+.||.+
T Consensus 212 ---------------------------------------------------~~---~~~~~~~~~~~~li~~~l~~dP~~ 237 (318)
T cd05570 212 ---------------------------------------------------EV---RYPRWLSKEAKSILKSFLTKNPEK 237 (318)
T ss_pred ---------------------------------------------------CC---CCCCcCCHHHHHHHHHHccCCHHH
Confidence 00 011246788999999999999999
Q ss_pred CCCH-----HHHhcCccccCc
Q 007541 346 RPTA-----EEALADPYFKGL 361 (599)
Q Consensus 346 RpTa-----~e~L~HP~f~~~ 361 (599)
|||+ .++++||||+..
T Consensus 238 R~s~~~~~~~~ll~~~~~~~~ 258 (318)
T cd05570 238 RLGCLPTGEQDIKGHPFFREI 258 (318)
T ss_pred cCCCCCCCHHHHhcCCCcCCC
Confidence 9999 999999999874
No 125
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=1.1e-42 Score=364.86 Aligned_cols=255 Identities=23% Similarity=0.400 Sum_probs=210.4
Q ss_pred ceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCccc-ChhhHHHHHHHHHHHHhcC-CCCccccceeecCCCcCCCcc
Q 007541 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFE-HVSDATRILREIKLLRLLR-HPDIVEIKHILLPPSRREFKD 101 (599)
Q Consensus 24 rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~-~~~~~~~i~rEi~iL~~l~-HpnIv~l~~v~~~~s~~~~~~ 101 (599)
+|++.+.||+|+||+||+|.++.+|+.||||++.+... .......+..|+.+++.+. |++|+++++++.. ...
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~-----~~~ 75 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQT-----VDR 75 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEec-----CCE
Confidence 47889999999999999999999999999999975322 2234456778999998886 5778888888743 347
Q ss_pred EEEEEecCC-cCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCCC
Q 007541 102 IYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT 180 (599)
Q Consensus 102 iylV~E~~~-g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~ 180 (599)
+|+||||++ ++|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++......
T Consensus 76 ~~lv~Ey~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~ 155 (323)
T cd05615 76 LYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDG 155 (323)
T ss_pred EEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeccccccccCCCC
Confidence 999999998 6999999888889999999999999999999999999999999999999999999999999997542221
Q ss_pred CCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHhh
Q 007541 181 PTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVCL 260 (599)
Q Consensus 181 ~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~~ 260 (599)
. .....+||+.|+|||++.+ ..++.++||||+||++++|++|++||.+.+....+..|...-
T Consensus 156 ~---~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~------------- 217 (323)
T cd05615 156 V---TTRTFCGTPDYIAPEIIAY--QPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHN------------- 217 (323)
T ss_pred c---cccCccCCccccCHHHHcC--CCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC-------------
Confidence 1 1234578999999999876 678999999999999999999999998876554443332100
Q ss_pred hhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHhcc
Q 007541 261 LLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLA 340 (599)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL~ 340 (599)
. ......+..+.+|+.+||+
T Consensus 218 ---------------------------------------------------------~---~~p~~~~~~~~~li~~~l~ 237 (323)
T cd05615 218 ---------------------------------------------------------V---SYPKSLSKEAVSICKGLMT 237 (323)
T ss_pred ---------------------------------------------------------C---CCCccCCHHHHHHHHHHcc
Confidence 0 0112467889999999999
Q ss_pred cCCCCCCC-----HHHHhcCccccCc
Q 007541 341 FEPKDRPT-----AEEALADPYFKGL 361 (599)
Q Consensus 341 ~DP~~RpT-----a~e~L~HP~f~~~ 361 (599)
.||.+|++ .+++++||||+.+
T Consensus 238 ~~p~~R~~~~~~~~~~i~~h~~f~~~ 263 (323)
T cd05615 238 KHPSKRLGCGPEGERDIREHAFFRRI 263 (323)
T ss_pred cCHhhCCCCCCCCHHHHhcCcccCCC
Confidence 99999997 5899999999875
No 126
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=7.5e-43 Score=359.48 Aligned_cols=287 Identities=40% Similarity=0.654 Sum_probs=231.3
Q ss_pred CCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCcc
Q 007541 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKD 101 (599)
Q Consensus 22 ~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~ 101 (599)
.+.|++.+.||.|+||.||+|.+..+++.||||.++...........+.+|+.+|+.++||||+++++++... +...
T Consensus 4 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~---~~~~ 80 (293)
T cd07843 4 VDEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGS---NLDK 80 (293)
T ss_pred hhhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEec---CCCc
Confidence 3579999999999999999999999999999999975433333344667899999999999999999988543 2258
Q ss_pred EEEEEecCCcCHHHHHHhCC-CCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCCC
Q 007541 102 IYVVFELMESDLHQVIKAND-DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT 180 (599)
Q Consensus 102 iylV~E~~~g~L~~~i~~~~-~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~ 180 (599)
+|+|+||+.++|.+++.... .+++..++.++.||+.||+|||+.||+|+||||+|||++.++.+||+|||+++......
T Consensus 81 ~~lv~e~~~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~ 160 (293)
T cd07843 81 IYMVMEYVEHDLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLNNRGILKICDFGLAREYGSPL 160 (293)
T ss_pred EEEEehhcCcCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCcEEEeecCceeeccCCc
Confidence 99999999999999987654 58999999999999999999999999999999999999999999999999998654321
Q ss_pred CCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHhh
Q 007541 181 PTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVCL 260 (599)
Q Consensus 181 ~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~~ 260 (599)
. ......++..|+|||.+.+. ..++.++||||+||++++|++|+++|.+.+..+.+.++...++.|..+.+.....
T Consensus 161 ~---~~~~~~~~~~~~aPE~~~~~-~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (293)
T cd07843 161 K---PYTQLVVTLWYRAPELLLGA-KEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSE 236 (293)
T ss_pred c---ccccccccccccCchhhcCC-ccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhc
Confidence 1 12345678899999988652 3468899999999999999999999999999999999999999988877654211
Q ss_pred hhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCC--CCHHHHHHHHHh
Q 007541 261 LLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPN--ANPLALRLLERM 338 (599)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~s~~a~dLL~~m 338 (599)
+.... . ..........+.+.++. +++.+.+||++|
T Consensus 237 ~~~~~------------------------------------~-------~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~ 273 (293)
T cd07843 237 LPGAK------------------------------------K-------KTFTKYPYNQLRKKFPALSLSDNGFDLLNRL 273 (293)
T ss_pred cchhc------------------------------------c-------cccccccchhhhccccccCCChHHHHHHHHH
Confidence 10000 0 00000111122233444 488899999999
Q ss_pred cccCCCCCCCHHHHhcCccc
Q 007541 339 LAFEPKDRPTAEEALADPYF 358 (599)
Q Consensus 339 L~~DP~~RpTa~e~L~HP~f 358 (599)
|+.||++|||+.|+|+||||
T Consensus 274 l~~~p~~R~t~~ell~~~~f 293 (293)
T cd07843 274 LTYDPAKRISAEDALKHPYF 293 (293)
T ss_pred hccCccccCCHHHHhcCCCC
Confidence 99999999999999999998
No 127
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=1.3e-42 Score=355.58 Aligned_cols=285 Identities=36% Similarity=0.657 Sum_probs=223.1
Q ss_pred CceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccE
Q 007541 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDI 102 (599)
Q Consensus 23 ~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~i 102 (599)
++|++.+.||+|+||.||+|.+..+++.||+|++............+.+|+.+|+.++||||+++++++. ....+
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~ 75 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFR-----RKKRL 75 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcc-----cCCeE
Confidence 4799999999999999999999999999999998654333334456779999999999999999999984 33579
Q ss_pred EEEEecCCc-CHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCCCC
Q 007541 103 YVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTP 181 (599)
Q Consensus 103 ylV~E~~~g-~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~~ 181 (599)
|+||||+++ .|..++.....+++..++.++.||+.||.|||+.||+|+||+|+||+++.++.+||+|||++.......
T Consensus 76 ~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~- 154 (286)
T cd07846 76 YLVFEFVDHTVLDDLEKYPNGLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG- 154 (286)
T ss_pred EEEEecCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCcEEEEeeeeeeeccCCc-
Confidence 999999996 566666555679999999999999999999999999999999999999999999999999997653322
Q ss_pred CcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHhhh
Q 007541 182 TAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVCLL 261 (599)
Q Consensus 182 ~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~~~ 261 (599)
...+.+.++.+|+|||++.+. ..++.++||||+||++++|++|+++|.+.+..+.+..+....+...........
T Consensus 155 --~~~~~~~~~~~y~aPE~~~~~-~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 229 (286)
T cd07846 155 --EVYTDYVATRWYRAPELLVGD-TKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQ-- 229 (286)
T ss_pred --cccCcccceeeccCcHHhccc-cccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhc--
Confidence 123456789999999988652 457889999999999999999999999888888777777766654432111100
Q ss_pred hhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHhccc
Q 007541 262 LNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAF 341 (599)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL~~ 341 (599)
.................+....++.++..+.+||.+||+.
T Consensus 230 ----------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~ 269 (286)
T cd07846 230 ----------------------------------------KNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRI 269 (286)
T ss_pred ----------------------------------------cchHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcC
Confidence 0000000000000001112223467789999999999999
Q ss_pred CCCCCCCHHHHhcCccc
Q 007541 342 EPKDRPTAEEALADPYF 358 (599)
Q Consensus 342 DP~~RpTa~e~L~HP~f 358 (599)
||.+|||+.++|+||||
T Consensus 270 ~P~~Rp~~~~il~~~~~ 286 (286)
T cd07846 270 DPDDRPSSSQLLHHEFF 286 (286)
T ss_pred CcccchhHHHHhcCCCC
Confidence 99999999999999998
No 128
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=1.2e-42 Score=355.40 Aligned_cols=281 Identities=37% Similarity=0.679 Sum_probs=227.7
Q ss_pred ceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEE
Q 007541 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIY 103 (599)
Q Consensus 24 rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~iy 103 (599)
+|++++.||.|++|.||+|.+..+|+.||||+++.... ......+.+|+.+++.++|+||+++++.+.. ...+|
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-----~~~~~ 74 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAE-EGTPSTAIREISLMKELKHENIVRLHDVIHT-----ENKLM 74 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEeccccc-ccchHHHHHHHHHHHhhcCCCEeeeeeeEee-----CCcEE
Confidence 58999999999999999999999999999999875322 2234567789999999999999999999854 34789
Q ss_pred EEEecCCcCHHHHHHhCC---CCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCCC
Q 007541 104 VVFELMESDLHQVIKAND---DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT 180 (599)
Q Consensus 104 lV~E~~~g~L~~~i~~~~---~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~ 180 (599)
+||||++++|.+++...+ .+++..+..++.||+.||.|||+.||+||||||+||+++.++.+||+|||+++......
T Consensus 75 lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~ 154 (284)
T cd07836 75 LVFEYMDKDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLINKRGELKLADFGLARAFGIPV 154 (284)
T ss_pred EEEecCCccHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCc
Confidence 999999999999887643 58999999999999999999999999999999999999999999999999997543221
Q ss_pred CCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHhh
Q 007541 181 PTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVCL 260 (599)
Q Consensus 181 ~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~~ 260 (599)
. ......++.+|++||.+.+. ..++.++||||+||++++|++|+++|.+.+..+++..+.+..+.|..+.+..+..
T Consensus 155 ~---~~~~~~~~~~y~~PE~~~~~-~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (284)
T cd07836 155 N---TFSNEVVTLWYRAPDVLLGS-RTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQ 230 (284)
T ss_pred c---ccccccccccccChHHhcCC-CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhc
Confidence 1 12344678899999987542 4678899999999999999999999999999999999999988888876655221
Q ss_pred hhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHhcc
Q 007541 261 LLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLA 340 (599)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL~ 340 (599)
.... ................+..++.+.++|.+||+
T Consensus 231 ~~~~--------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~ 266 (284)
T cd07836 231 LPEY--------------------------------------------KPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQ 266 (284)
T ss_pred Cchh--------------------------------------------cccccCCChHHHHHHhhhcCcHHHHHHHHHhc
Confidence 1000 00000011111122234567889999999999
Q ss_pred cCCCCCCCHHHHhcCccc
Q 007541 341 FEPKDRPTAEEALADPYF 358 (599)
Q Consensus 341 ~DP~~RpTa~e~L~HP~f 358 (599)
.||.+|||+.|+|+||||
T Consensus 267 ~~p~~R~~~~~~l~~~~f 284 (284)
T cd07836 267 LNPELRISAHDALQHPWF 284 (284)
T ss_pred CCcccCCCHHHHhcCCCC
Confidence 999999999999999998
No 129
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=2.2e-42 Score=358.90 Aligned_cols=295 Identities=37% Similarity=0.602 Sum_probs=222.7
Q ss_pred ceEEEEEEeecCceEEEEEEECC--CCcEEEEEEecCcc-cChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCc
Q 007541 24 RYKIEEVIGKGSYGVVCSAYDTR--TGEKVAIKKINDIF-EHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFK 100 (599)
Q Consensus 24 rY~i~~~LG~G~~g~V~~a~d~~--tg~~vAIK~i~~~~-~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~ 100 (599)
+|++.+.||+|++|.||+|.+.. +++.||||.+.... ........+.+|+.+++.++||||+++++++... +..
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~---~~~ 77 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEH---ADK 77 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCC---CCc
Confidence 69999999999999999999988 89999999987532 1122345677899999999999999999999643 235
Q ss_pred cEEEEEecCCcCHHHHHHhC-----CCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCC----CCceeeeccC
Q 007541 101 DIYVVFELMESDLHQVIKAN-----DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANA----DCKLKICDFG 171 (599)
Q Consensus 101 ~iylV~E~~~g~L~~~i~~~-----~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~----~~~lKL~DFG 171 (599)
.+|+||||++++|.+++... ..+++..++.++.||+.||.|||+.||+||||||+|||++. ++.+||+|||
T Consensus 78 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg 157 (316)
T cd07842 78 SVYLLFDYAEHDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLG 157 (316)
T ss_pred eEEEEEeCCCcCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCCCccceEEECCCc
Confidence 79999999999998887532 26899999999999999999999999999999999999999 8999999999
Q ss_pred ccccccCCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChh---------hHHHH
Q 007541 172 LARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVV---------HQLDI 242 (599)
Q Consensus 172 lA~~~~~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~---------~~l~~ 242 (599)
+++...............+++.+|+|||++.+. ..++.++|||||||++++|++|++||.+.... ..+..
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (316)
T cd07842 158 LARLFNAPLKPLADLDPVVVTIWYRAPELLLGA-RHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLER 236 (316)
T ss_pred cccccCCCcccccccCCccccccccCHHHHhCC-CCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHH
Confidence 998654322211122345789999999987552 46889999999999999999999999876532 46677
Q ss_pred HHHhcCCCCHHHHHHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCC
Q 007541 243 MTDLLGTPSPEAIARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQ 322 (599)
Q Consensus 243 I~~~lG~p~~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (599)
+...++.+.+..+............ ...... ....+...... ..
T Consensus 237 ~~~~l~~~~~~~~~~~~~~~~~~~~-----~~~~~~-------------------~~~~~~~~~~~------------~~ 280 (316)
T cd07842 237 IFEVLGTPTEKDWPDIKKMPEYDTL-----MKDFKT-------------------KTYPSNSLAKW------------ME 280 (316)
T ss_pred HHHHhCCCchhHHHHHhhcccchhh-----hhhccC-------------------CCCCCccHHHH------------HH
Confidence 7777887777655442221110000 000000 00000000000 01
Q ss_pred CCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 007541 323 KFPNANPLALRLLERMLAFEPKDRPTAEEALADPYF 358 (599)
Q Consensus 323 ~~~~~s~~a~dLL~~mL~~DP~~RpTa~e~L~HP~f 358 (599)
.....+..+.+||.+||++||++|||+.|+++||||
T Consensus 281 ~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~~~f 316 (316)
T cd07842 281 KHKKPDSQGFDLLRKLLEYDPTKRITAEEALEHPYF 316 (316)
T ss_pred hccCCCHHHHHHHHHHhcCCcccCcCHHHHhcCCCC
Confidence 112567889999999999999999999999999998
No 130
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=1.3e-42 Score=365.71 Aligned_cols=264 Identities=22% Similarity=0.395 Sum_probs=212.4
Q ss_pred CceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcc-cChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCcc
Q 007541 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIF-EHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKD 101 (599)
Q Consensus 23 ~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~-~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~ 101 (599)
++|+++++||+|+||+||+++++.+++.||+|++.+.. ........+.+|+.++..++|++|+++++++.. ..+
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-----~~~ 75 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQD-----ENN 75 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEec-----CCE
Confidence 47999999999999999999999999999999986421 122233457789999999999999999999843 357
Q ss_pred EEEEEecCC-cCHHHHHHh-CCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCC
Q 007541 102 IYVVFELME-SDLHQVIKA-NDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFND 179 (599)
Q Consensus 102 iylV~E~~~-g~L~~~i~~-~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~ 179 (599)
+|+||||+. |+|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 76 ~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~ 155 (332)
T cd05623 76 LYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMED 155 (332)
T ss_pred EEEEEeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEeecchheecccC
Confidence 999999998 699999976 457999999999999999999999999999999999999999999999999999754322
Q ss_pred CCCcccccccccCccccCccccccc---cCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHH
Q 007541 180 TPTAIFWTDYVATRWYRAPELCGSF---FSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIA 256 (599)
Q Consensus 180 ~~~~~~~t~~~gt~~Y~APE~l~~~---~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~ 256 (599)
.. ......+||+.|+|||++... ...++.++|||||||++|+|++|+.||.+.+..+.+..|....
T Consensus 156 ~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~--------- 224 (332)
T cd05623 156 GT--VQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHK--------- 224 (332)
T ss_pred Cc--ceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHHHhCCC---------
Confidence 21 112345799999999988521 1468899999999999999999999998877655444432110
Q ss_pred HHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHH
Q 007541 257 RVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLE 336 (599)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~ 336 (599)
....+......+++.+.+||+
T Consensus 225 -----------------------------------------------------------~~~~~p~~~~~~s~~~~~li~ 245 (332)
T cd05623 225 -----------------------------------------------------------ERFQFPAQVTDVSEDAKDLIR 245 (332)
T ss_pred -----------------------------------------------------------ccccCCCccccCCHHHHHHHH
Confidence 011122223457899999999
Q ss_pred HhcccCCCC--CCCHHHHhcCccccCc
Q 007541 337 RMLAFEPKD--RPTAEEALADPYFKGL 361 (599)
Q Consensus 337 ~mL~~DP~~--RpTa~e~L~HP~f~~~ 361 (599)
+||..++.+ |+|++|+++||||.++
T Consensus 246 ~ll~~~~~r~~r~~~~~~~~h~~f~~~ 272 (332)
T cd05623 246 RLICSREHRLGQNGIEDFKQHPFFTGI 272 (332)
T ss_pred HHccChhhhcCCCCHHHHhCCCCcCCC
Confidence 999765554 6899999999999875
No 131
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=1.1e-42 Score=372.20 Aligned_cols=264 Identities=24% Similarity=0.355 Sum_probs=212.4
Q ss_pred CCCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcc-cChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCC
Q 007541 21 EGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIF-EHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREF 99 (599)
Q Consensus 21 ~~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~-~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~ 99 (599)
..++|++.+.||+|+||.||+|+++.+++.||+|++.... ........+.+|+.+++.++||||+++++++.. .
T Consensus 41 ~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~-----~ 115 (371)
T cd05622 41 KAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD-----D 115 (371)
T ss_pred chhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEc-----C
Confidence 3589999999999999999999999999999999986422 222334567789999999999999999999843 3
Q ss_pred ccEEEEEecCC-cCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccC
Q 007541 100 KDIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFN 178 (599)
Q Consensus 100 ~~iylV~E~~~-g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~ 178 (599)
..+|+||||++ ++|.+++... .+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++....
T Consensus 116 ~~~~lv~Ey~~gg~L~~~~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll~~~~~ikL~DfG~a~~~~~ 194 (371)
T cd05622 116 RYLYMVMEYMPGGDLVNLMSNY-DVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNK 194 (371)
T ss_pred CEEEEEEcCCCCCcHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEECCCCCEEEEeCCceeEcCc
Confidence 57999999998 6899988765 589999999999999999999999999999999999999999999999999986532
Q ss_pred CCCCcccccccccCccccCcccccccc--CCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHH
Q 007541 179 DTPTAIFWTDYVATRWYRAPELCGSFF--SKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIA 256 (599)
Q Consensus 179 ~~~~~~~~t~~~gt~~Y~APE~l~~~~--~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~ 256 (599)
... ......+||+.|+|||++.... ..++.++|||||||++|+|++|+.||.+.+....+..|.....
T Consensus 195 ~~~--~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~-------- 264 (371)
T cd05622 195 EGM--VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKN-------- 264 (371)
T ss_pred CCc--ccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCC--------
Confidence 211 1123567999999999986421 2388999999999999999999999998776554444332110
Q ss_pred HHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHH
Q 007541 257 RVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLE 336 (599)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~ 336 (599)
...+. ....++..+.+||.
T Consensus 265 ------------------------------------------------------------~~~~~-~~~~~s~~~~~li~ 283 (371)
T cd05622 265 ------------------------------------------------------------SLTFP-DDNDISKEAKNLIC 283 (371)
T ss_pred ------------------------------------------------------------cccCC-CcCCCCHHHHHHHH
Confidence 00111 12457889999999
Q ss_pred HhcccCCCC--CCCHHHHhcCccccCc
Q 007541 337 RMLAFEPKD--RPTAEEALADPYFKGL 361 (599)
Q Consensus 337 ~mL~~DP~~--RpTa~e~L~HP~f~~~ 361 (599)
+||..++.+ |++++|+++||||++.
T Consensus 284 ~~L~~~~~r~~r~~~~ei~~h~~~~~~ 310 (371)
T cd05622 284 AFLTDREVRLGRNGVEEIKRHLFFKND 310 (371)
T ss_pred HHcCChhhhcCCCCHHHHhcCcccCCC
Confidence 999844433 7899999999999863
No 132
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=8.6e-43 Score=366.81 Aligned_cols=259 Identities=23% Similarity=0.416 Sum_probs=203.9
Q ss_pred EEEeecCceEEEEEEECCCCcEEEEEEecCccc-ChhhHHHHHHHHHHHHhc-CCCCccccceeecCCCcCCCccEEEEE
Q 007541 29 EVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFE-HVSDATRILREIKLLRLL-RHPDIVEIKHILLPPSRREFKDIYVVF 106 (599)
Q Consensus 29 ~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~-~~~~~~~i~rEi~iL~~l-~HpnIv~l~~v~~~~s~~~~~~iylV~ 106 (599)
+.||+|+||+||+|.++.+++.||+|++++... .......+.+|+.++..+ +||||+++++++.. ...+|+||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~-----~~~~~lv~ 75 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQT-----ESRLFFVI 75 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEe-----CCEEEEEE
Confidence 469999999999999999999999999976432 233455677899988776 79999999999854 34799999
Q ss_pred ecCC-cCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCCCCCccc
Q 007541 107 ELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIF 185 (599)
Q Consensus 107 E~~~-g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~~~~~~ 185 (599)
||+. ++|...+...+.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++....... .
T Consensus 76 E~~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~---~ 152 (329)
T cd05618 76 EYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD---T 152 (329)
T ss_pred eCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCCEEEeeCCccccccCCCC---c
Confidence 9999 68999988888899999999999999999999999999999999999999999999999999975322111 1
Q ss_pred ccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHhhhhhhh
Q 007541 186 WTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVCLLLNII 265 (599)
Q Consensus 186 ~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~~~~~~~ 265 (599)
....+||..|+|||++.+ ..++.++|||||||++|+|++|+.||....... .+..
T Consensus 153 ~~~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~----------~~~~------------- 207 (329)
T cd05618 153 TSTFCGTPNYIAPEILRG--EDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSD----------NPDQ------------- 207 (329)
T ss_pred cccccCCccccCHHHHcC--CCCCCccceecccHHHHHHhhCCCCCccCCCcC----------Cccc-------------
Confidence 234678999999999876 678999999999999999999999995321100 0000
Q ss_pred hcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCC
Q 007541 266 WCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKD 345 (599)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL~~DP~~ 345 (599)
....++......... ......+..+.+||++||+.||++
T Consensus 208 --------------------------------------~~~~~~~~~i~~~~~---~~p~~~~~~~~~ll~~~L~~dP~~ 246 (329)
T cd05618 208 --------------------------------------NTEDYLFQVILEKQI---RIPRSLSVKAASVLKSFLNKDPKE 246 (329)
T ss_pred --------------------------------------ccHHHHHHHHhcCCC---CCCCCCCHHHHHHHHHHhcCCHHH
Confidence 000000000000011 122356888999999999999999
Q ss_pred CCC------HHHHhcCccccCc
Q 007541 346 RPT------AEEALADPYFKGL 361 (599)
Q Consensus 346 RpT------a~e~L~HP~f~~~ 361 (599)
|+| ++++++||||+++
T Consensus 247 R~~~~~~~~~~~i~~hp~f~~~ 268 (329)
T cd05618 247 RLGCHPQTGFADIQGHPFFRNV 268 (329)
T ss_pred cCCCCCCCCHHHHhcCCCCCCC
Confidence 998 5899999999864
No 133
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=2e-42 Score=353.06 Aligned_cols=280 Identities=39% Similarity=0.714 Sum_probs=223.1
Q ss_pred eEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcC-CCCccccceeecCCCcCCCccEE
Q 007541 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLR-HPDIVEIKHILLPPSRREFKDIY 103 (599)
Q Consensus 25 Y~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~-HpnIv~l~~v~~~~s~~~~~~iy 103 (599)
|++++.||+|+||.||+|.+..+++.||+|+++....... .....+|+.+++.+. |+||+++++++.+. ....+|
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~-~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~---~~~~~~ 76 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLE-QVNNLREIQALRRLSPHPNILRLIEVLFDR---KTGRLA 76 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCch-hhhHHHHHHHHhhcCCCCCccceEEEEecC---CCCcEE
Confidence 7889999999999999999999999999999875433322 234458999998886 99999999998643 224789
Q ss_pred EEEecCCcCHHHHHHhC-CCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCCCCC
Q 007541 104 VVFELMESDLHQVIKAN-DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPT 182 (599)
Q Consensus 104 lV~E~~~g~L~~~i~~~-~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~~~ 182 (599)
+||||++++|.+.+... ..+++..+..++.||+.||.|||+.||+||||||+||+++. +.+||+|||+++.......
T Consensus 77 lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~~- 154 (282)
T cd07831 77 LVFELMDMNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIKD-DILKLADFGSCRGIYSKPP- 154 (282)
T ss_pred EEEecCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEcC-CCeEEEecccccccccCCC-
Confidence 99999999999988764 57899999999999999999999999999999999999999 9999999999986543222
Q ss_pred cccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHhhhh
Q 007541 183 AIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVCLLL 262 (599)
Q Consensus 183 ~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~~~~ 262 (599)
...+.++.+|+|||.+... ..++.++||||+||++++|++|.+||++.+..+.+..+.+.+|.+..+.........
T Consensus 155 ---~~~~~~~~~y~aPE~~~~~-~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (282)
T cd07831 155 ---YTEYISTRWYRAPECLLTD-GYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSR 230 (282)
T ss_pred ---cCCCCCCcccCChhHhhcC-CCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhcccc
Confidence 2345688999999976442 457889999999999999999999999999999999999999988876532210000
Q ss_pred hhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHhcccC
Q 007541 263 NIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFE 342 (599)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL~~D 342 (599)
. ..+ .........+....+..+..+.+||.+||.+|
T Consensus 231 ~------------------------------------------~~~--~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~ 266 (282)
T cd07831 231 H------------------------------------------MNY--NFPSKKGTGLRKLLPNASAEGLDLLKKLLAYD 266 (282)
T ss_pred c------------------------------------------ccc--cCcccccccHHHHcccccHHHHHHHHHHhccC
Confidence 0 000 00000111112223456889999999999999
Q ss_pred CCCCCCHHHHhcCccc
Q 007541 343 PKDRPTAEEALADPYF 358 (599)
Q Consensus 343 P~~RpTa~e~L~HP~f 358 (599)
|.+|||++++|+||||
T Consensus 267 P~~R~~~~~~l~~~~~ 282 (282)
T cd07831 267 PDERITAKQALRHPYF 282 (282)
T ss_pred cccccCHHHHhhCCCC
Confidence 9999999999999998
No 134
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=100.00 E-value=3.8e-44 Score=373.90 Aligned_cols=310 Identities=30% Similarity=0.459 Sum_probs=235.2
Q ss_pred CCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCC------CCccccceeecCCC
Q 007541 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRH------PDIVEIKHILLPPS 95 (599)
Q Consensus 22 ~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~H------pnIv~l~~v~~~~s 95 (599)
.+||.|....|+|-||+|..|.|...|..||||+|.+ +..-...=++|+.||++|+. -++++|+..|.
T Consensus 431 D~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRn---NE~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~--- 504 (752)
T KOG0670|consen 431 DSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRN---NEVMHKTGLKELEILKKLNDADPEDKFHCLRLFRHFK--- 504 (752)
T ss_pred cceeEEEeccccceeeeeeeccccCCCCeeEEEEeec---chHHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhh---
Confidence 5899999999999999999999999999999999974 22223344689999999963 36888888884
Q ss_pred cCCCccEEEEEecCCcCHHHHHHhCC---CCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCC-CceeeeccC
Q 007541 96 RREFKDIYVVFELMESDLHQVIKAND---DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANAD-CKLKICDFG 171 (599)
Q Consensus 96 ~~~~~~iylV~E~~~g~L~~~i~~~~---~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~-~~lKL~DFG 171 (599)
..+|+|||||-+.-+|.++++..| +|....++.|.+||+-||+.|...||+|.||||+|||||+. ..+||||||
T Consensus 505 --hknHLClVFE~LslNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVNE~k~iLKLCDfG 582 (752)
T KOG0670|consen 505 --HKNHLCLVFEPLSLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVNESKNILKLCDFG 582 (752)
T ss_pred --hcceeEEEehhhhchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceEeccCcceeeeccCc
Confidence 346999999999999999999755 78999999999999999999999999999999999999986 568999999
Q ss_pred ccccccCCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCC
Q 007541 172 LARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPS 251 (599)
Q Consensus 172 lA~~~~~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~ 251 (599)
.|..+... ..|.|..++.|+|||+|++ ..|+..+|+||+||+||||.||+.+|+|..+.+.|...+++-|..+
T Consensus 583 SA~~~~en-----eitPYLVSRFYRaPEIiLG--~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KGk~p 655 (752)
T KOG0670|consen 583 SASFASEN-----EITPYLVSRFYRAPEIILG--LPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKGKFP 655 (752)
T ss_pred cccccccc-----cccHHHHHHhccCcceeec--CcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhcCCCc
Confidence 99765432 2478999999999999998 6899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHH-HHHHHHhcccCCCCCCCCCCCCCCHH
Q 007541 252 PEAIARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEK-ARRYLSSMRKKKPIPFSQKFPNANPL 330 (599)
Q Consensus 252 ~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~s~~ 330 (599)
-..+.+... .-.+++..++.+.....++.. ++-... +.+-+ .+++...+......+ .--+..-..
T Consensus 656 ~KmlRKgqF----~dqHFD~d~nf~~~e~D~vT~-----r~~~~v---m~~vkPtkdl~s~l~~~q~~~--deq~~~~~~ 721 (752)
T KOG0670|consen 656 NKMLRKGQF----KDQHFDQDLNFLYIEVDKVTE-----REKRTV---MVNVKPTKDLGSELIAVQRLP--DEQPKIVQQ 721 (752)
T ss_pred HHHhhhcch----hhhhcccccceEEEecccccc-----ceeEEE---ecccCcchhHHHHHhccCCCC--chhHHHHHH
Confidence 888776221 112223222221111000000 000000 00000 122222221111100 001112346
Q ss_pred HHHHHHHhcccCCCCCCCHHHHhcCccccC
Q 007541 331 ALRLLERMLAFEPKDRPTAEEALADPYFKG 360 (599)
Q Consensus 331 a~dLL~~mL~~DP~~RpTa~e~L~HP~f~~ 360 (599)
+.+||.+||..||.+|+|..+||.||||++
T Consensus 722 ~rdLLdkml~LdP~KRit~nqAL~HpFi~~ 751 (752)
T KOG0670|consen 722 LRDLLDKMLILDPEKRITVNQALKHPFITE 751 (752)
T ss_pred HHHHHHHHhccChhhcCCHHHHhcCCcccC
Confidence 899999999999999999999999999974
No 135
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=1.6e-42 Score=384.22 Aligned_cols=267 Identities=25% Similarity=0.369 Sum_probs=219.5
Q ss_pred CCCCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCc---
Q 007541 20 GEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSR--- 96 (599)
Q Consensus 20 ~~~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~--- 96 (599)
...++|++.+.||+|+||+||+|.+..+|+.||||++...........++.+|+.+|..++|+||+++++.+.....
T Consensus 29 ~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~ 108 (496)
T PTZ00283 29 EQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNP 108 (496)
T ss_pred ccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCc
Confidence 34689999999999999999999999999999999997654445556778899999999999999999887753321
Q ss_pred CCCccEEEEEecCC-cCHHHHHHhC----CCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccC
Q 007541 97 REFKDIYVVFELME-SDLHQVIKAN----DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFG 171 (599)
Q Consensus 97 ~~~~~iylV~E~~~-g~L~~~i~~~----~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFG 171 (599)
.....+++||||+. |+|.+++... ..+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||
T Consensus 109 ~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl~~~~~vkL~DFG 188 (496)
T PTZ00283 109 ENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLCSNGLVKLGDFG 188 (496)
T ss_pred ccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEeCCCCEEEEecc
Confidence 12235789999999 6999988653 468999999999999999999999999999999999999999999999999
Q ss_pred ccccccCCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCC
Q 007541 172 LARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPS 251 (599)
Q Consensus 172 lA~~~~~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~ 251 (599)
+++........ ......+||+.|+|||++.+ ..|+.++|||||||++|+|++|+.||.+.+..+.+..+...
T Consensus 189 ls~~~~~~~~~-~~~~~~~Gt~~Y~aPE~~~~--~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~~~~~~~~----- 260 (496)
T PTZ00283 189 FSKMYAATVSD-DVGRTFCGTPYYVAPEIWRR--KPYSKKADMFSLGVLLYELLTLKRPFDGENMEEVMHKTLAG----- 260 (496)
T ss_pred cCeeccccccc-cccccccCCcceeCHHHhCC--CCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcC-----
Confidence 99865332111 11234679999999999976 67999999999999999999999999887654433332110
Q ss_pred HHHHHHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHH
Q 007541 252 PEAIARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLA 331 (599)
Q Consensus 252 ~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a 331 (599)
......+..++.+
T Consensus 261 -------------------------------------------------------------------~~~~~~~~~~~~l 273 (496)
T PTZ00283 261 -------------------------------------------------------------------RYDPLPPSISPEM 273 (496)
T ss_pred -------------------------------------------------------------------CCCCCCCCCCHHH
Confidence 0011224578899
Q ss_pred HHHHHHhcccCCCCCCCHHHHhcCccccCc
Q 007541 332 LRLLERMLAFEPKDRPTAEEALADPYFKGL 361 (599)
Q Consensus 332 ~dLL~~mL~~DP~~RpTa~e~L~HP~f~~~ 361 (599)
.+||.+||+.||.+|||+.++|+|||++.+
T Consensus 274 ~~li~~~L~~dP~~RPs~~ell~~p~~~~~ 303 (496)
T PTZ00283 274 QEIVTALLSSDPKRRPSSSKLLNMPICKLF 303 (496)
T ss_pred HHHHHHHcccChhhCcCHHHHHhCHHHHHh
Confidence 999999999999999999999999999864
No 136
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=1.9e-42 Score=356.04 Aligned_cols=258 Identities=26% Similarity=0.391 Sum_probs=209.7
Q ss_pred ceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCccc-ChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccE
Q 007541 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFE-HVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDI 102 (599)
Q Consensus 24 rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~-~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~i 102 (599)
.|++.++||+|+||+||++.+..+++.||||++..... .......+.+|+.+|+.++|+||+.+++++.. ...+
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-----~~~~ 75 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYET-----KDAL 75 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecC-----CCeE
Confidence 48999999999999999999999999999999864322 22233456789999999999999999999843 3479
Q ss_pred EEEEecCC-cCHHHHHHhC--CCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCC
Q 007541 103 YVVFELME-SDLHQVIKAN--DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFND 179 (599)
Q Consensus 103 ylV~E~~~-g~L~~~i~~~--~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~ 179 (599)
|+||||+. ++|.+++... ..+++..+..++.||+.||.|||+.||+||||||+|||++.++.++|+|||+++.....
T Consensus 76 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~ 155 (285)
T cd05605 76 CLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILLDDYGHIRISDLGLAVEIPEG 155 (285)
T ss_pred EEEEeccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEECCCCCEEEeeCCCceecCCC
Confidence 99999998 6898887643 46899999999999999999999999999999999999999999999999999765322
Q ss_pred CCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHh
Q 007541 180 TPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVC 259 (599)
Q Consensus 180 ~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~ 259 (599)
.. ....+++..|+|||++.+ ..++.++||||+||++|+|++|+.||.+.+.......+...+
T Consensus 156 ~~----~~~~~~~~~y~aPE~~~~--~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~------------ 217 (285)
T cd05605 156 ET----IRGRVGTVGYMAPEVVKN--ERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRV------------ 217 (285)
T ss_pred Cc----cccccCCCCccCcHHhcC--CCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHHHh------------
Confidence 11 133478999999999876 678999999999999999999999998765433222221100
Q ss_pred hhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHhc
Q 007541 260 LLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERML 339 (599)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL 339 (599)
.. .. ......+++.+.+||.+||
T Consensus 218 -----------------------------------------------------~~-~~---~~~~~~~~~~~~~li~~~l 240 (285)
T cd05605 218 -----------------------------------------------------KE-DQ---EEYSEKFSEAARSICRQLL 240 (285)
T ss_pred -----------------------------------------------------hh-cc---cccCcccCHHHHHHHHHHc
Confidence 00 00 0112346788999999999
Q ss_pred ccCCCCCC-----CHHHHhcCccccCc
Q 007541 340 AFEPKDRP-----TAEEALADPYFKGL 361 (599)
Q Consensus 340 ~~DP~~Rp-----Ta~e~L~HP~f~~~ 361 (599)
..||.+|| +++++++||||...
T Consensus 241 ~~~P~~R~~~~~~~~~~l~~~~~~~~~ 267 (285)
T cd05605 241 TKDPGFRLGCRGEGAEEVKAHPFFRTA 267 (285)
T ss_pred cCCHHHhcCCCCCCHHHHhcCcCccCC
Confidence 99999999 99999999999863
No 137
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=1.2e-42 Score=363.68 Aligned_cols=251 Identities=25% Similarity=0.417 Sum_probs=205.3
Q ss_pred EEEeecCceEEEEEEECCCCcEEEEEEecCccc-ChhhHHHHHHHHHHHHhc-CCCCccccceeecCCCcCCCccEEEEE
Q 007541 29 EVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFE-HVSDATRILREIKLLRLL-RHPDIVEIKHILLPPSRREFKDIYVVF 106 (599)
Q Consensus 29 ~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~-~~~~~~~i~rEi~iL~~l-~HpnIv~l~~v~~~~s~~~~~~iylV~ 106 (599)
+.||+|+||+||+|++..+++.||||+++.... ..........|..++..+ +||||+++++++.. ...+|+||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~-----~~~~~lv~ 75 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQT-----KENLFFVM 75 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEe-----CCEEEEEE
Confidence 469999999999999999999999999975322 123345566788888764 89999999999844 34799999
Q ss_pred ecCC-cCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCCCCCccc
Q 007541 107 ELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIF 185 (599)
Q Consensus 107 E~~~-g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~~~~~~ 185 (599)
||+. ++|.+++.....+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++....... .
T Consensus 76 ey~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~---~ 152 (316)
T cd05619 76 EYLNGGDLMFHIQSCHKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDA---K 152 (316)
T ss_pred eCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEccCCcceECCCCCC---c
Confidence 9998 69999998877899999999999999999999999999999999999999999999999999875322111 1
Q ss_pred ccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHhhhhhhh
Q 007541 186 WTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVCLLLNII 265 (599)
Q Consensus 186 ~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~~~~~~~ 265 (599)
....+||..|+|||++.+ ..++.++||||+||++|+|++|+.||.+.+..+.+..+...
T Consensus 153 ~~~~~gt~~y~aPE~~~~--~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~i~~~------------------- 211 (316)
T cd05619 153 TCTFCGTPDYIAPEILLG--QKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIRMD------------------- 211 (316)
T ss_pred eeeecCCccccCHHHHcC--CCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC-------------------
Confidence 234578999999999876 67899999999999999999999999877654433322100
Q ss_pred hcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCC
Q 007541 266 WCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKD 345 (599)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL~~DP~~ 345 (599)
.+ ......+..+.+||.+||+.||.+
T Consensus 212 --------------------------------------------------~~----~~~~~~~~~~~~li~~~l~~~P~~ 237 (316)
T cd05619 212 --------------------------------------------------NP----CYPRWLTREAKDILVKLFVREPER 237 (316)
T ss_pred --------------------------------------------------CC----CCCccCCHHHHHHHHHHhccCHhh
Confidence 00 011236778999999999999999
Q ss_pred CCCHH-HHhcCccccCcc
Q 007541 346 RPTAE-EALADPYFKGLA 362 (599)
Q Consensus 346 RpTa~-e~L~HP~f~~~~ 362 (599)
|+++. ++++||||+.+.
T Consensus 238 R~~~~~~l~~h~~~~~~~ 255 (316)
T cd05619 238 RLGVKGDIRQHPFFREID 255 (316)
T ss_pred cCCChHHHHcCcccCCCC
Confidence 99996 899999998753
No 138
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=1.1e-42 Score=357.08 Aligned_cols=252 Identities=24% Similarity=0.382 Sum_probs=202.6
Q ss_pred EeecCceEEEEEEECCCCcEEEEEEecCccc-ChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEEEEEecC
Q 007541 31 IGKGSYGVVCSAYDTRTGEKVAIKKINDIFE-HVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVVFELM 109 (599)
Q Consensus 31 LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~-~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~iylV~E~~ 109 (599)
||+|+||+||+|.++.+|+.||+|++..... .......+..|+.+|+.++|+||+++.+++.. ...+|+||||+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~-----~~~~~lv~e~~ 75 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQT-----KTDLCLVMTIM 75 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcC-----CCeEEEEEeCC
Confidence 6999999999999999999999999864322 22234567789999999999999999998843 34799999999
Q ss_pred C-cCHHHHHHh----CCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCCCCCcc
Q 007541 110 E-SDLHQVIKA----NDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAI 184 (599)
Q Consensus 110 ~-g~L~~~i~~----~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~~~~~ 184 (599)
+ ++|.+.+.. +..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++.........
T Consensus 76 ~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~-- 153 (280)
T cd05608 76 NGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSK-- 153 (280)
T ss_pred CCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCccceecCCCCcc--
Confidence 8 588877742 346999999999999999999999999999999999999999999999999999765332211
Q ss_pred cccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHhhhhhh
Q 007541 185 FWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVCLLLNI 264 (599)
Q Consensus 185 ~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~~~~~~ 264 (599)
.....+|+.|+|||++.+ ..++.++||||+||++|+|++|+.||.+.+.......+..
T Consensus 154 -~~~~~g~~~y~aPE~~~~--~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~------------------- 211 (280)
T cd05608 154 -TKGYAGTPGFMAPELLQG--EEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQ------------------- 211 (280)
T ss_pred -ccccCCCcCccCHHHhcC--CCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHH-------------------
Confidence 234578999999999977 6789999999999999999999999976543211111100
Q ss_pred hhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHhcccCCC
Q 007541 265 IWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPK 344 (599)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL~~DP~ 344 (599)
.... .+. ......++.+.+|+.+||+.||.
T Consensus 212 ----------------------------------------------~~~~-~~~---~~~~~~~~~~~~li~~~l~~~P~ 241 (280)
T cd05608 212 ----------------------------------------------RILN-DSV---TYPDKFSPASKSFCEALLAKDPE 241 (280)
T ss_pred ----------------------------------------------hhcc-cCC---CCcccCCHHHHHHHHHHhcCCHH
Confidence 0000 000 11235788899999999999999
Q ss_pred CCC-----CHHHHhcCccccCc
Q 007541 345 DRP-----TAEEALADPYFKGL 361 (599)
Q Consensus 345 ~Rp-----Ta~e~L~HP~f~~~ 361 (599)
+|+ |++++|+||||+++
T Consensus 242 ~R~~~~~~~~~~~l~h~~~~~~ 263 (280)
T cd05608 242 KRLGFRDGNCDGLRTHPLFRDL 263 (280)
T ss_pred HhcCCCCCCHHHHhcChhhhcC
Confidence 999 89999999999875
No 139
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.4e-42 Score=380.41 Aligned_cols=282 Identities=26% Similarity=0.329 Sum_probs=210.5
Q ss_pred CCCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCc
Q 007541 21 EGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFK 100 (599)
Q Consensus 21 ~~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~ 100 (599)
.+..|.+.+.||+|+||.||+|.+..+++.||||... ...+.+|+.+|+.|+|+||+++++++... .
T Consensus 167 ~~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~--------~~~~~~E~~iL~~L~HpnIv~l~~~~~~~-----~ 233 (461)
T PHA03211 167 AGLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW--------YASSVHEARLLRRLSHPAVLALLDVRVVG-----G 233 (461)
T ss_pred ccCCeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc--------ccCHHHHHHHHHHCCCCCCCcEEEEEEEC-----C
Confidence 4568999999999999999999999999999999642 12346899999999999999999988433 4
Q ss_pred cEEEEEecCCcCHHHHHHhC-CCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCC
Q 007541 101 DIYVVFELMESDLHQVIKAN-DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFND 179 (599)
Q Consensus 101 ~iylV~E~~~g~L~~~i~~~-~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~ 179 (599)
..|+|||++.++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 234 ~~~lv~e~~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~ 313 (461)
T PHA03211 234 LTCLVLPKYRSDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVNGPEDICLGDFGAACFARGS 313 (461)
T ss_pred EEEEEEEccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEECCCCCEEEcccCCceecccc
Confidence 68999999999999998764 46999999999999999999999999999999999999999999999999999865332
Q ss_pred CCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCC-CCCCCCh------hhHHHHHHHhcCCCCH
Q 007541 180 TPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKP-LFPGKNV------VHQLDIMTDLLGTPSP 252 (599)
Q Consensus 180 ~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~-pF~g~~~------~~~l~~I~~~lG~p~~ 252 (599)
... ......+||..|+|||++.+ ..++.++||||||||||||++|.. +|..... ..++..|+...+....
T Consensus 314 ~~~-~~~~~~~GT~~Y~APE~~~~--~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~ 390 (461)
T PHA03211 314 WST-PFHYGIAGTVDTNAPEVLAG--DPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVD 390 (461)
T ss_pred ccc-ccccccCCCcCCcCHHHHcC--CCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccc
Confidence 211 11234579999999999977 679999999999999999999874 5543321 2334444433322111
Q ss_pred HHHHHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhc----ccCCCCCCCCCCCCCC
Q 007541 253 EAIARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSM----RKKKPIPFSQKFPNAN 328 (599)
Q Consensus 253 e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~s 328 (599)
+.-. . ........+.... ......+....+...+
T Consensus 391 ~~~~------------------~------------------------~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 428 (461)
T PHA03211 391 EFPQ------------------H------------------------AGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLD 428 (461)
T ss_pred cCCC------------------C------------------------cchHHHHHHHhhhhcccCCccCCcchhhhcccc
Confidence 1000 0 0000000111100 0001111112223567
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHhcCccccC
Q 007541 329 PLALRLLERMLAFEPKDRPTAEEALADPYFKG 360 (599)
Q Consensus 329 ~~a~dLL~~mL~~DP~~RpTa~e~L~HP~f~~ 360 (599)
+.+.+||.+||++||.+|||+.|+|+||||+.
T Consensus 429 ~~~~dli~~mL~~DP~~RPsa~elL~hp~f~~ 460 (461)
T PHA03211 429 LDVEYLVCRALTFDGARRPSAAELLRLPLFQS 460 (461)
T ss_pred chHHHHHHHHcccChhhCcCHHHHhhCcccCC
Confidence 78999999999999999999999999999974
No 140
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=100.00 E-value=1.7e-42 Score=364.45 Aligned_cols=295 Identities=40% Similarity=0.603 Sum_probs=234.3
Q ss_pred cCCCCceEE-EEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhh------------HHHHHHHHHHHHhcCCCCcc
Q 007541 19 YGEGSRYKI-EEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSD------------ATRILREIKLLRLLRHPDIV 85 (599)
Q Consensus 19 ~~~~~rY~i-~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~------------~~~i~rEi~iL~~l~HpnIv 85 (599)
+...+||.. .+.||.|+||+||+|.+..+++.||||+++........ ...+.+|+.+|+.++|+||+
T Consensus 4 ~~~~~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv 83 (335)
T PTZ00024 4 FSISERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIM 83 (335)
T ss_pred cccccchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCccee
Confidence 467889975 57799999999999999999999999998643221100 12467899999999999999
Q ss_pred ccceeecCCCcCCCccEEEEEecCCcCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCce
Q 007541 86 EIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKL 165 (599)
Q Consensus 86 ~l~~v~~~~s~~~~~~iylV~E~~~g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~l 165 (599)
++++++.. ...+|+||||+.++|.+++.....+++..+..++.||+.||.|||+.||+|+||||+|||++.++.+
T Consensus 84 ~~~~~~~~-----~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill~~~~~~ 158 (335)
T PTZ00024 84 GLVDVYVE-----GDFINLVMDIMASDLKKVVDRKIRLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFINSKGIC 158 (335)
T ss_pred eeeEEEec-----CCcEEEEEeccccCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeEECCCCCE
Confidence 99999843 3479999999999999999888889999999999999999999999999999999999999999999
Q ss_pred eeeccCccccccCCC-----------CCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCC
Q 007541 166 KICDFGLARVAFNDT-----------PTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGK 234 (599)
Q Consensus 166 KL~DFGlA~~~~~~~-----------~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~ 234 (599)
||+|||+++...... ..........++..|+|||.+.+. ..++.++|||||||++++|++|++||.+.
T Consensus 159 kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~ 237 (335)
T PTZ00024 159 KIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGA-EKYHFAVDMWSVGCIFAELLTGKPLFPGE 237 (335)
T ss_pred EECCccceeecccccccccccccccccccccccccccccCCCCChhcccC-CCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 999999997654111 011112334578899999988652 45789999999999999999999999999
Q ss_pred ChhhHHHHHHHhcCCCCHHHHHHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhccc
Q 007541 235 NVVHQLDIMTDLLGTPSPEAIARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRK 314 (599)
Q Consensus 235 ~~~~~l~~I~~~lG~p~~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (599)
+..+++..+...++.+....+........ + .....
T Consensus 238 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~--------------------------------------------~-~~~~~ 272 (335)
T PTZ00024 238 NEIDQLGRIFELLGTPNEDNWPQAKKLPL--------------------------------------------Y-TEFTP 272 (335)
T ss_pred CHHHHHHHHHHHhCCCchhhCcchhhccc--------------------------------------------c-cccCc
Confidence 99999999999999887754432100000 0 00001
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccccCcccC
Q 007541 315 KKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKV 364 (599)
Q Consensus 315 ~~~~~~~~~~~~~s~~a~dLL~~mL~~DP~~RpTa~e~L~HP~f~~~~~~ 364 (599)
..+..+...++..+..+.+||.+||+.||.+|||++|+|.||||++....
T Consensus 273 ~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~~~~~~~~~~ 322 (335)
T PTZ00024 273 RKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKHEYFKSDPLP 322 (335)
T ss_pred CCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhcCcccCCCCCC
Confidence 11222233345678889999999999999999999999999999977543
No 141
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=9e-42 Score=351.12 Aligned_cols=287 Identities=37% Similarity=0.625 Sum_probs=222.5
Q ss_pred cCCCCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCC
Q 007541 19 YGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRRE 98 (599)
Q Consensus 19 ~~~~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~ 98 (599)
+|..++|++++.||+|+||.||+|.++.+|+.||||.+..... ......+.+|+.+|+.++|+||+++++++..
T Consensus 1 ~~~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~----- 74 (291)
T cd07870 1 FGAATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTE-EGVPFTAIREASLLKGLKHANIVLLHDIIHT----- 74 (291)
T ss_pred CCccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCc-CCCcHHHHHHHHHHHhcCCCCEeEEEEEEec-----
Confidence 4677899999999999999999999999999999999864322 2223456789999999999999999999843
Q ss_pred CccEEEEEecCCcCHHHHHHhC-CCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCcccccc
Q 007541 99 FKDIYVVFELMESDLHQVIKAN-DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAF 177 (599)
Q Consensus 99 ~~~iylV~E~~~g~L~~~i~~~-~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~ 177 (599)
....|+||||+.++|.+.+... ..+++..++.++.||+.||.|||+.||+|+||||+|||++.++.+||+|||+++...
T Consensus 75 ~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~ 154 (291)
T cd07870 75 KETLTFVFEYMHTDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLISYLGELKLADFGLARAKS 154 (291)
T ss_pred CCeEEEEEecccCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEcCCCcEEEeccccccccC
Confidence 3478999999999988877653 468899999999999999999999999999999999999999999999999997643
Q ss_pred CCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCC-hhhHHHHHHHhcCCCCHHHHH
Q 007541 178 NDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKN-VVHQLDIMTDLLGTPSPEAIA 256 (599)
Q Consensus 178 ~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~-~~~~l~~I~~~lG~p~~e~i~ 256 (599)
.... ......++..|+|||.+.+. ..++.++|||||||++++|++|..||.+.+ ..+++..+...+|.|..+.+.
T Consensus 155 ~~~~---~~~~~~~~~~y~aPE~~~~~-~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (291)
T cd07870 155 IPSQ---TYSSEVVTLWYRPPDVLLGA-TDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWP 230 (291)
T ss_pred CCCC---CCCCccccccccCCceeecC-CCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhh
Confidence 2211 12334678899999988542 457889999999999999999999997654 456777777888887776544
Q ss_pred HHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCC--CCCHHHHHH
Q 007541 257 RVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFP--NANPLALRL 334 (599)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~s~~a~dL 334 (599)
......... . .+ .....+..+...+. ..++.+.+|
T Consensus 231 ~~~~~~~~~-----~-----------------------------------~~---~~~~~~~~~~~~~~~~~~~~~~~~l 267 (291)
T cd07870 231 GVSKLPNYK-----P-----------------------------------EW---FLPCKPQQLRVVWKRLSRPPKAEDL 267 (291)
T ss_pred hhhhccccc-----c-----------------------------------hh---ccccCCcchhhhccccCCChHHHHH
Confidence 421111000 0 00 00000111111111 135778999
Q ss_pred HHHhcccCCCCCCCHHHHhcCccc
Q 007541 335 LERMLAFEPKDRPTAEEALADPYF 358 (599)
Q Consensus 335 L~~mL~~DP~~RpTa~e~L~HP~f 358 (599)
|.+||..||.+|||+.|+|.||||
T Consensus 268 l~~~l~~dp~~R~t~~~~l~h~~~ 291 (291)
T cd07870 268 ASQMLMMFPKDRISAQDALLHPYF 291 (291)
T ss_pred HHHHhCcCcccCcCHHHHhcCCCC
Confidence 999999999999999999999998
No 142
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=9.1e-43 Score=365.53 Aligned_cols=250 Identities=28% Similarity=0.487 Sum_probs=204.9
Q ss_pred EEEeecCceEEEEEEECCCCcEEEEEEecCccc-ChhhHHHHHHHHHH-HHhcCCCCccccceeecCCCcCCCccEEEEE
Q 007541 29 EVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFE-HVSDATRILREIKL-LRLLRHPDIVEIKHILLPPSRREFKDIYVVF 106 (599)
Q Consensus 29 ~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~-~~~~~~~i~rEi~i-L~~l~HpnIv~l~~v~~~~s~~~~~~iylV~ 106 (599)
+.||+|+||+||+|.++.+|+.||||++..... .......+.+|..+ ++.++||||+++++++.. ...+|+||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~-----~~~~~lv~ 75 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQT-----TEKLYFVL 75 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEec-----CCEEEEEE
Confidence 469999999999999999999999999865322 22334556667654 678899999999998843 35799999
Q ss_pred ecCC-cCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCCCCCccc
Q 007541 107 ELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIF 185 (599)
Q Consensus 107 E~~~-g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~~~~~~ 185 (599)
||+. ++|...+...+.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++....... .
T Consensus 76 e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~~---~ 152 (325)
T cd05604 76 DFVNGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSD---T 152 (325)
T ss_pred cCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEeecCCcccCCCCCC---C
Confidence 9998 58999998888899999999999999999999999999999999999999999999999999875322211 1
Q ss_pred ccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHhhhhhhh
Q 007541 186 WTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVCLLLNII 265 (599)
Q Consensus 186 ~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~~~~~~~ 265 (599)
....+||..|+|||++.+ ..++.++|||||||++|+|++|++||.+.+..+.+..+..
T Consensus 153 ~~~~~gt~~y~aPE~~~~--~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~~~-------------------- 210 (325)
T cd05604 153 TTTFCGTPEYLAPEVIRK--QPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILH-------------------- 210 (325)
T ss_pred cccccCChhhCCHHHHcC--CCCCCcCccccccceehhhhcCCCCCCCCCHHHHHHHHHc--------------------
Confidence 245679999999999876 6789999999999999999999999987765443332211
Q ss_pred hcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCC
Q 007541 266 WCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKD 345 (599)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL~~DP~~ 345 (599)
.. ....+..+..+.+||.+||..||.+
T Consensus 211 --------------------------------------------------~~---~~~~~~~~~~~~~ll~~ll~~~p~~ 237 (325)
T cd05604 211 --------------------------------------------------KP---LVLRPGASLTAWSILEELLEKDRQR 237 (325)
T ss_pred --------------------------------------------------CC---ccCCCCCCHHHHHHHHHHhccCHHh
Confidence 00 0112457788999999999999999
Q ss_pred CCCH----HHHhcCccccCc
Q 007541 346 RPTA----EEALADPYFKGL 361 (599)
Q Consensus 346 RpTa----~e~L~HP~f~~~ 361 (599)
||++ .++++||||.+.
T Consensus 238 R~~~~~~~~~i~~h~~f~~~ 257 (325)
T cd05604 238 RLGAKEDFLEIQEHPFFESL 257 (325)
T ss_pred cCCCCCCHHHHhcCCCcCCC
Confidence 9976 699999999864
No 143
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=1.3e-42 Score=368.58 Aligned_cols=258 Identities=26% Similarity=0.333 Sum_probs=202.8
Q ss_pred CCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCcc
Q 007541 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKD 101 (599)
Q Consensus 22 ~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~ 101 (599)
-+.|++++.||+|+||.||+|.+..+|+.||||++.... .......+.+|+.+|+.++|+||+++++++. ....
T Consensus 73 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~~~ 146 (353)
T PLN00034 73 LSELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNH-EDTVRRQICREIEILRDVNHPNVVKCHDMFD-----HNGE 146 (353)
T ss_pred HHHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCC-cHHHHHHHHHHHHHHHhCCCCCcceeeeEec-----cCCe
Confidence 367889999999999999999999999999999986432 2233467889999999999999999999984 3457
Q ss_pred EEEEEecCCc-CHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCCC
Q 007541 102 IYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT 180 (599)
Q Consensus 102 iylV~E~~~g-~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~ 180 (599)
+|+||||+.+ +|.+. ..+++..+..+++||+.||.|||++||+||||||+|||++.++.+||+|||+++......
T Consensus 147 ~~lv~e~~~~~~L~~~----~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~ 222 (353)
T PLN00034 147 IQVLLEFMDGGSLEGT----HIADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTM 222 (353)
T ss_pred EEEEEecCCCCccccc----ccCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEcccccceeccccc
Confidence 9999999994 66542 346788889999999999999999999999999999999999999999999998653221
Q ss_pred CCcccccccccCccccCccccccc---cCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHH
Q 007541 181 PTAIFWTDYVATRWYRAPELCGSF---FSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIAR 257 (599)
Q Consensus 181 ~~~~~~t~~~gt~~Y~APE~l~~~---~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~ 257 (599)
. .....+||..|+|||++... ...++.++||||||||+|+|++|+.||......+....+..
T Consensus 223 ~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~------------ 287 (353)
T PLN00034 223 D---PCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCA------------ 287 (353)
T ss_pred c---cccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHH------------
Confidence 1 12345799999999987431 12345689999999999999999999974332111111100
Q ss_pred HhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHH
Q 007541 258 VCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLER 337 (599)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~ 337 (599)
..... ........++.+.+||.+
T Consensus 288 ------------------------------------------------------~~~~~---~~~~~~~~~~~l~~li~~ 310 (353)
T PLN00034 288 ------------------------------------------------------ICMSQ---PPEAPATASREFRHFISC 310 (353)
T ss_pred ------------------------------------------------------HhccC---CCCCCCccCHHHHHHHHH
Confidence 00000 011223567889999999
Q ss_pred hcccCCCCCCCHHHHhcCccccCc
Q 007541 338 MLAFEPKDRPTAEEALADPYFKGL 361 (599)
Q Consensus 338 mL~~DP~~RpTa~e~L~HP~f~~~ 361 (599)
||+.||++|||+.|+|+||||.+-
T Consensus 311 ~l~~~P~~Rpt~~ell~hp~~~~~ 334 (353)
T PLN00034 311 CLQREPAKRWSAMQLLQHPFILRA 334 (353)
T ss_pred HccCChhhCcCHHHHhcCcccccC
Confidence 999999999999999999999875
No 144
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=2e-42 Score=354.18 Aligned_cols=286 Identities=39% Similarity=0.697 Sum_probs=226.2
Q ss_pred CceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccE
Q 007541 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDI 102 (599)
Q Consensus 23 ~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~i 102 (599)
++|++.+.||+|++|.||+|.+..+++.||||+++...........+.+|+.+|+.++|+||+++++++.. ...+
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-----~~~~ 75 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRR-----KGRL 75 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEE-----CCEE
Confidence 47999999999999999999999999999999987544344445678899999999999999999999854 3479
Q ss_pred EEEEecCCcCHHHH-HHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCCCC
Q 007541 103 YVVFELMESDLHQV-IKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTP 181 (599)
Q Consensus 103 ylV~E~~~g~L~~~-i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~~ 181 (599)
|+||||+++++.+. +.....+++..++.++.||+.||.|||+.||+|+||+|+||+++.++.+||+|||++........
T Consensus 76 ~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~ 155 (288)
T cd07833 76 YLVFEYVERTLLELLEASPGGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVSESGVLKLCDFGFARALRARPA 155 (288)
T ss_pred EEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEEeeecccccCCCcc
Confidence 99999999765554 44456799999999999999999999999999999999999999999999999999987544332
Q ss_pred CcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHhhh
Q 007541 182 TAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVCLL 261 (599)
Q Consensus 182 ~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~~~ 261 (599)
.....++++.+|+|||++.+. ..++.++||||+||++++|++|+++|.+.+..+.+..+...+|..++.......
T Consensus 156 --~~~~~~~~~~~~~~PE~~~~~-~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 230 (288)
T cd07833 156 --SPLTDYVATRWYRAPELLVGD-TNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFS-- 230 (288)
T ss_pred --ccccCcccccCCcCCchhcCC-CCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcc--
Confidence 122456789999999998762 378899999999999999999999999998888888888888877765433200
Q ss_pred hhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCC-CCHHHHHHHHHhcc
Q 007541 262 LNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPN-ANPLALRLLERMLA 340 (599)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~s~~a~dLL~~mL~ 340 (599)
....+. ..+. ........+...++. .++.+.+||++||.
T Consensus 231 ~~~~~~-~~~~---------------------------------------~~~~~~~~~~~~~~~~~~~~~~~li~~~l~ 270 (288)
T cd07833 231 SNPRFA-GVAF---------------------------------------PEPSQPESLERRYPGKVSSPALDFLKACLR 270 (288)
T ss_pred cCcccc-cccc---------------------------------------CCCCCcHHHHHhcCCccchHHHHHHHHHhc
Confidence 000000 0000 000000011112223 47889999999999
Q ss_pred cCCCCCCCHHHHhcCccc
Q 007541 341 FEPKDRPTAEEALADPYF 358 (599)
Q Consensus 341 ~DP~~RpTa~e~L~HP~f 358 (599)
.||++|||++++++||||
T Consensus 271 ~~p~~Rps~~~il~~~~f 288 (288)
T cd07833 271 MDPKERLTCDELLQHPYF 288 (288)
T ss_pred cCchhcccHHHHhcCCCC
Confidence 999999999999999998
No 145
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=4.4e-42 Score=362.02 Aligned_cols=299 Identities=22% Similarity=0.339 Sum_probs=216.9
Q ss_pred CCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCcc
Q 007541 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKD 101 (599)
Q Consensus 22 ~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~ 101 (599)
.++|++.+.||+|+||.||+|.+..++..||+|++.... .......+.+|+.+|+.++|+||+++++++... ..
T Consensus 4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-----~~ 77 (333)
T cd06650 4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEI-KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSD-----GE 77 (333)
T ss_pred hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeeccc-CHHHHHHHHHHHHHHHHCCCCcccceeEEEEEC-----CE
Confidence 478999999999999999999999999999999887532 223446788999999999999999999999543 47
Q ss_pred EEEEEecCC-cCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccC-ceEeecCCCCcEEeCCCCceeeeccCccccccCC
Q 007541 102 IYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTA-NVFHRDLKPKNILANADCKLKICDFGLARVAFND 179 (599)
Q Consensus 102 iylV~E~~~-g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~-gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~ 179 (599)
+|+||||+. ++|.+++...+.+++..++.++.||+.||.|||+. +|+||||||+|||++.++.+||+|||++......
T Consensus 78 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~ 157 (333)
T cd06650 78 ISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS 157 (333)
T ss_pred EEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcCCCCEEEeeCCcchhhhhh
Confidence 999999998 59999999888899999999999999999999975 7999999999999999999999999999754322
Q ss_pred CCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHH-hcCCCCHHHHHHH
Q 007541 180 TPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTD-LLGTPSPEAIARV 258 (599)
Q Consensus 180 ~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~-~lG~p~~e~i~~~ 258 (599)
. .....++..|+|||++.+ ..++.++||||+||++|+|++|+.||......+....+.. ..|.+.......
T Consensus 158 ~-----~~~~~~~~~y~aPE~~~~--~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 229 (333)
T cd06650 158 M-----ANSFVGTRSYMSPERLQG--THYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETSP- 229 (333)
T ss_pred c-----cccCCCCccccCHHHhcC--CCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCccccccCc-
Confidence 1 134578999999999876 6789999999999999999999999987654332211110 111111100000
Q ss_pred hhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHh
Q 007541 259 CLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERM 338 (599)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~m 338 (599)
.+...........+.. ............+.......+. ....+.++.+||.+|
T Consensus 230 ------~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~ 282 (333)
T cd06650 230 ------RPRPPGRPLSSYGPDS-------------------RPPMAIFELLDYIVNEPPPKLP--SGVFGAEFQDFVNKC 282 (333)
T ss_pred ------ccCCccchhhhhcccc-------------------cccccHHHHHHHHhcCCCccCC--CCCcCHHHHHHHHHh
Confidence 0000000000000000 0000001111111111111111 123578899999999
Q ss_pred cccCCCCCCCHHHHhcCccccCc
Q 007541 339 LAFEPKDRPTAEEALADPYFKGL 361 (599)
Q Consensus 339 L~~DP~~RpTa~e~L~HP~f~~~ 361 (599)
|++||.+|||++|+|.||||+..
T Consensus 283 L~~~P~~Rpt~~ell~h~~~~~~ 305 (333)
T cd06650 283 LIKNPAERADLKQLMVHAFIKRS 305 (333)
T ss_pred ccCCcccCcCHHHHhhCHHHhcC
Confidence 99999999999999999999854
No 146
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=6.4e-42 Score=345.78 Aligned_cols=258 Identities=26% Similarity=0.432 Sum_probs=210.6
Q ss_pred CceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccC---hhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCC
Q 007541 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEH---VSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREF 99 (599)
Q Consensus 23 ~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~---~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~ 99 (599)
+.|++.+.||+|++|.||.|.+..+++.||+|.+...... ......+.+|+.+++.++||||+++++++.. .
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-----~ 76 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRD-----D 76 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEcc-----C
Confidence 5699999999999999999999999999999998643222 1234567899999999999999999999843 3
Q ss_pred ccEEEEEecCC-cCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccC
Q 007541 100 KDIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFN 178 (599)
Q Consensus 100 ~~iylV~E~~~-g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~ 178 (599)
..+|+|+||+. ++|.+++...+.+++..++.+++||+.||.|||+.||+||||+|+||+++.++.++|+|||+++....
T Consensus 77 ~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~ 156 (263)
T cd06625 77 ETLSIFMEYMPGGSVKDQLKAYGALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQT 156 (263)
T ss_pred CeEEEEEEECCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccceeccc
Confidence 48999999998 58999998888899999999999999999999999999999999999999999999999999976533
Q ss_pred CCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHH
Q 007541 179 DTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARV 258 (599)
Q Consensus 179 ~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~ 258 (599)
............++..|+|||++.+ ..++.++||||+||++++|++|+.||...+.......+...
T Consensus 157 ~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~------------ 222 (263)
T cd06625 157 ICSSGTGMKSVTGTPYWMSPEVISG--EGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQ------------ 222 (263)
T ss_pred cccccccccCCCcCccccCcceecc--CCCCchhhhHHHHHHHHHHHhCCCCccccchHHHHHHHhcc------------
Confidence 2211111134567889999999977 56889999999999999999999999765433222111100
Q ss_pred hhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHh
Q 007541 259 CLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERM 338 (599)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~m 338 (599)
. .........+..+.+||.+|
T Consensus 223 --------------------------------------------------------~---~~~~~~~~~~~~~~~li~~~ 243 (263)
T cd06625 223 --------------------------------------------------------P---TNPQLPSHVSPDARNFLRRT 243 (263)
T ss_pred --------------------------------------------------------C---CCCCCCccCCHHHHHHHHHH
Confidence 0 00112234678899999999
Q ss_pred cccCCCCCCCHHHHhcCccc
Q 007541 339 LAFEPKDRPTAEEALADPYF 358 (599)
Q Consensus 339 L~~DP~~RpTa~e~L~HP~f 358 (599)
|..||.+|||+.|+|+||||
T Consensus 244 l~~~p~~Rpt~~~ll~~~~~ 263 (263)
T cd06625 244 FVENAKKRPSAEELLRHFFV 263 (263)
T ss_pred hhcCcccCCCHHHHhhCCCC
Confidence 99999999999999999998
No 147
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00 E-value=4.5e-42 Score=350.28 Aligned_cols=282 Identities=48% Similarity=0.794 Sum_probs=233.5
Q ss_pred eEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEEE
Q 007541 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYV 104 (599)
Q Consensus 25 Y~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~iyl 104 (599)
|++.+.||.|++|.||+|.+..+|+.+|+|.+............+.+|+.+|+.++|+||+++++++... ..+|+
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-----~~~~~ 75 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHK-----GDLYL 75 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccC-----CCEEE
Confidence 6788999999999999999999999999999876544434556788999999999999999999998543 57999
Q ss_pred EEecCCcCHHHHHHhC-CCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCCCCCc
Q 007541 105 VFELMESDLHQVIKAN-DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTA 183 (599)
Q Consensus 105 V~E~~~g~L~~~i~~~-~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~~~~ 183 (599)
|+||++++|.+++... ..+++..+..++.||+.||.|||+.||+|+||||+|||++.++.+||+|||.+.......
T Consensus 76 v~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~--- 152 (283)
T cd05118 76 VFEFMDTDLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLINTEGVLKLADFGLARSFGSPV--- 152 (283)
T ss_pred EEeccCCCHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCc---
Confidence 9999999999988764 579999999999999999999999999999999999999999999999999997764332
Q ss_pred ccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHhhhhh
Q 007541 184 IFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVCLLLN 263 (599)
Q Consensus 184 ~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~~~~~ 263 (599)
.......++.+|+|||.+.+. ..++.++||||+||++|+|++|+.+|++.+..+++..+...++.+.++.+.......
T Consensus 153 ~~~~~~~~~~~~~~PE~~~~~-~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 230 (283)
T cd05118 153 RPYTHYVVTRWYRAPELLLGD-KGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLA- 230 (283)
T ss_pred ccccCccCcccccCcHHHhcC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhh-
Confidence 122345788899999998662 478999999999999999999999999999999999999999988776654421100
Q ss_pred hhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHhcccCC
Q 007541 264 IIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEP 343 (599)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL~~DP 343 (599)
....-..............+..+..+.+||.+||+.||
T Consensus 231 ------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P 268 (283)
T cd05118 231 ------------------------------------------RNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDP 268 (283)
T ss_pred ------------------------------------------hhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCc
Confidence 01111112222233334456678999999999999999
Q ss_pred CCCCCHHHHhcCccc
Q 007541 344 KDRPTAEEALADPYF 358 (599)
Q Consensus 344 ~~RpTa~e~L~HP~f 358 (599)
.+||++.++|.||||
T Consensus 269 ~~Rp~~~~ll~~~~~ 283 (283)
T cd05118 269 HKRITAEQALAHPYF 283 (283)
T ss_pred ccCcCHHHHhhCCCC
Confidence 999999999999997
No 148
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=100.00 E-value=9.6e-44 Score=339.09 Aligned_cols=290 Identities=30% Similarity=0.599 Sum_probs=232.6
Q ss_pred cccCCCCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcC-CCCccccceeecCCC
Q 007541 17 TEYGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLR-HPDIVEIKHILLPPS 95 (599)
Q Consensus 17 ~~~~~~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~-HpnIv~l~~v~~~~s 95 (599)
..||..+.|++++++|+|.|+.||.|++..+.++++||+++. -..+.|.|||.||+.|+ ||||++|+++..++.
T Consensus 32 i~wg~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKP-----VkkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~ 106 (338)
T KOG0668|consen 32 IDWGNQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKP-----VKKKKIKREIKILQNLRGGPNIIKLLDIVKDPE 106 (338)
T ss_pred eeccccchHHHHHHHcCccHhhHhcccccCCCceEEEeeech-----HHHHHHHHHHHHHHhccCCCCeeehhhhhcCcc
Confidence 468999999999999999999999999999999999999874 45567899999999998 999999999997753
Q ss_pred cCCCccEEEEEecCCc-CHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCC-CceeeeccCcc
Q 007541 96 RREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANAD-CKLKICDFGLA 173 (599)
Q Consensus 96 ~~~~~~iylV~E~~~g-~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~-~~lKL~DFGlA 173 (599)
.+...|||||++. |..++. ..|+.-.++.++++||.||.||||+||.|||+||.|++||.. -.++|+|+|||
T Consensus 107 ---SktpaLiFE~v~n~Dfk~ly---~tl~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmIdh~~rkLrlIDWGLA 180 (338)
T KOG0668|consen 107 ---SKTPSLIFEYVNNTDFKQLY---PTLTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMIDHELRKLRLIDWGLA 180 (338)
T ss_pred ---ccCchhHhhhhccccHHHHh---hhhchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeeechhhceeeeeecchH
Confidence 3467899999995 666654 358889999999999999999999999999999999999975 56999999999
Q ss_pred ccccCCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCC-CCCCCCChhhHHHHHHHhcCCCCH
Q 007541 174 RVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGK-PLFPGKNVVHQLDIMTDLLGTPSP 252 (599)
Q Consensus 174 ~~~~~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~-~pF~g~~~~~~l~~I~~~lG~p~~ 252 (599)
.....+. .+.-.+.+++|--||++-.. ..|+..-|||||||+|+.|+..+ |.|.|.++.+|+.+|.+++|+...
T Consensus 181 EFYHp~~----eYnVRVASRyfKGPELLVdy-~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el 255 (338)
T KOG0668|consen 181 EFYHPGK----EYNVRVASRYFKGPELLVDY-QMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDEL 255 (338)
T ss_pred hhcCCCc----eeeeeeehhhcCCchheeec-hhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHH
Confidence 8764332 23456899999999999774 78999999999999999999876 667899999999999999997533
Q ss_pred HHHHHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCC-----CCC
Q 007541 253 EAIARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKF-----PNA 327 (599)
Q Consensus 253 e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~ 327 (599)
...-. .|.- .-+ .++-..+......++.... .-.
T Consensus 256 ~~Yl~----------KY~i----------------------------~Ld---p~~~~i~~~~~rk~w~~Fi~~~n~hl~ 294 (338)
T KOG0668|consen 256 YAYLN----------KYQI----------------------------DLD---PQFEDILGRHSRKPWSRFINSENQHLV 294 (338)
T ss_pred HHHHH----------HHcc----------------------------CCC---hhHhhHhhccccccHHHhCCccccccC
Confidence 21111 0000 000 1111112222222332222 225
Q ss_pred CHHHHHHHHHhcccCCCCCCCHHHHhcCccccCccc
Q 007541 328 NPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAK 363 (599)
Q Consensus 328 s~~a~dLL~~mL~~DP~~RpTa~e~L~HP~f~~~~~ 363 (599)
+++|+|||.++|.+|-.+|+||.|++.||||..+.+
T Consensus 295 ~peaiDlldklLrYDHqeRlTakEam~HpyF~~~~~ 330 (338)
T KOG0668|consen 295 SPEAIDLLDKLLRYDHQERLTAKEAMAHPYFAPVRE 330 (338)
T ss_pred ChHHHHHHHHHHhhccccccchHHHhcCchHHHHHH
Confidence 799999999999999999999999999999987643
No 149
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=6.6e-43 Score=367.17 Aligned_cols=250 Identities=24% Similarity=0.412 Sum_probs=201.9
Q ss_pred EeecCceEEEEEEECCCCcEEEEEEecCcc-cChhhHHHHHHHHHHHHhc---CCCCccccceeecCCCcCCCccEEEEE
Q 007541 31 IGKGSYGVVCSAYDTRTGEKVAIKKINDIF-EHVSDATRILREIKLLRLL---RHPDIVEIKHILLPPSRREFKDIYVVF 106 (599)
Q Consensus 31 LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~-~~~~~~~~i~rEi~iL~~l---~HpnIv~l~~v~~~~s~~~~~~iylV~ 106 (599)
||+|+||+||+|+++.+|+.||||++.... ..........+|..++..+ .||||+++++++.. ..++|+||
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~-----~~~~~lv~ 75 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQT-----DSDLYLVT 75 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEec-----CCeEEEEE
Confidence 799999999999999999999999986422 1222334556777777655 69999999999843 35799999
Q ss_pred ecCC-cCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCCCCCccc
Q 007541 107 ELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIF 185 (599)
Q Consensus 107 E~~~-g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~~~~~~ 185 (599)
||+. ++|.+++...+.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++....... .
T Consensus 76 e~~~~g~L~~~l~~~~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~---~ 152 (330)
T cd05586 76 DYMSGGELFWHLQKEGRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDATGHIALCDFGLSKANLTDNK---T 152 (330)
T ss_pred cCCCCChHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCCC---C
Confidence 9998 69999998888899999999999999999999999999999999999999999999999999975422211 1
Q ss_pred ccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHhhhhhhh
Q 007541 186 WTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVCLLLNII 265 (599)
Q Consensus 186 ~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~~~~~~~ 265 (599)
....+||..|+|||++.+. ..++.++|||||||++|+|++|+.||.+.+....+..|...
T Consensus 153 ~~~~~gt~~y~aPE~~~~~-~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i~~~------------------- 212 (330)
T cd05586 153 TNTFCGTTEYLAPEVLLDE-KGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAFG------------------- 212 (330)
T ss_pred ccCccCCccccCHHHHcCC-CCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHHHHcC-------------------
Confidence 2456799999999988652 45889999999999999999999999876654433322110
Q ss_pred hcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCC
Q 007541 266 WCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKD 345 (599)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL~~DP~~ 345 (599)
...+. ....++.+.+||++||+.||.+
T Consensus 213 ---------------------------------------------------~~~~~--~~~~~~~~~~li~~~L~~~P~~ 239 (330)
T cd05586 213 ---------------------------------------------------KVRFP--KNVLSDEGRQFVKGLLNRNPQH 239 (330)
T ss_pred ---------------------------------------------------CCCCC--CccCCHHHHHHHHHHcCCCHHH
Confidence 00000 1236788999999999999999
Q ss_pred CC----CHHHHhcCccccCc
Q 007541 346 RP----TAEEALADPYFKGL 361 (599)
Q Consensus 346 Rp----Ta~e~L~HP~f~~~ 361 (599)
|| +++++|+||||...
T Consensus 240 R~~~~~~~~~ll~h~~~~~~ 259 (330)
T cd05586 240 RLGAHRDAVELKEHPFFADI 259 (330)
T ss_pred CCCCCCCHHHHhcCccccCC
Confidence 98 79999999999864
No 150
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=1.8e-42 Score=362.49 Aligned_cols=250 Identities=26% Similarity=0.443 Sum_probs=203.5
Q ss_pred EEEeecCceEEEEEEECCCCcEEEEEEecCccc-ChhhHHHHHHHHH-HHHhcCCCCccccceeecCCCcCCCccEEEEE
Q 007541 29 EVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFE-HVSDATRILREIK-LLRLLRHPDIVEIKHILLPPSRREFKDIYVVF 106 (599)
Q Consensus 29 ~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~-~~~~~~~i~rEi~-iL~~l~HpnIv~l~~v~~~~s~~~~~~iylV~ 106 (599)
++||+|+||+||+|++..+|+.||||++.+... .......+.+|+. +++.++||||+++++++.. ...+|+||
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~-----~~~~~lv~ 75 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQT-----AEKLYFVL 75 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEc-----CCEEEEEE
Confidence 469999999999999999999999999864321 2223345666665 5788999999999998843 34799999
Q ss_pred ecCC-cCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCCCCCccc
Q 007541 107 ELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIF 185 (599)
Q Consensus 107 E~~~-g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~~~~~~ 185 (599)
||++ ++|...+.....+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++....... .
T Consensus 76 e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~---~ 152 (321)
T cd05603 76 DYVNGGELFFHLQRERCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEE---T 152 (321)
T ss_pred cCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEccCCCCccCCCCCC---c
Confidence 9998 58999888878899999999999999999999999999999999999999999999999999875322111 1
Q ss_pred ccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHhhhhhhh
Q 007541 186 WTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVCLLLNII 265 (599)
Q Consensus 186 ~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~~~~~~~ 265 (599)
....+||+.|+|||++.+ ..++.++|||||||++|+|++|++||.+.+.......+..
T Consensus 153 ~~~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~-------------------- 210 (321)
T cd05603 153 TSTFCGTPEYLAPEVLRK--EPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILH-------------------- 210 (321)
T ss_pred cccccCCcccCCHHHhcC--CCCCCcCcccccchhhhhhhcCCCCCCCCCHHHHHHHHhc--------------------
Confidence 234678999999999876 6789999999999999999999999988765443332211
Q ss_pred hcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCC
Q 007541 266 WCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKD 345 (599)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL~~DP~~ 345 (599)
.+. ...+..+..+.+||.+||+.||.+
T Consensus 211 --------------------------------------------------~~~---~~~~~~~~~~~~li~~~l~~~p~~ 237 (321)
T cd05603 211 --------------------------------------------------KPL---QLPGGKTVAACDLLVGLLHKDQRR 237 (321)
T ss_pred --------------------------------------------------CCC---CCCCCCCHHHHHHHHHHccCCHhh
Confidence 000 112356778999999999999999
Q ss_pred CCCH----HHHhcCccccCc
Q 007541 346 RPTA----EEALADPYFKGL 361 (599)
Q Consensus 346 RpTa----~e~L~HP~f~~~ 361 (599)
|+++ .|+++|+||..+
T Consensus 238 R~~~~~~~~~~~~~~~~~~~ 257 (321)
T cd05603 238 RLGAKADFLEIKNHVFFSPI 257 (321)
T ss_pred cCCCCCCHHHHhCCCCcCCC
Confidence 9875 599999999754
No 151
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=2.3e-42 Score=362.56 Aligned_cols=250 Identities=27% Similarity=0.460 Sum_probs=204.4
Q ss_pred EEEeecCceEEEEEEECCCCcEEEEEEecCccc-ChhhHHHHHHHHH-HHHhcCCCCccccceeecCCCcCCCccEEEEE
Q 007541 29 EVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFE-HVSDATRILREIK-LLRLLRHPDIVEIKHILLPPSRREFKDIYVVF 106 (599)
Q Consensus 29 ~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~-~~~~~~~i~rEi~-iL~~l~HpnIv~l~~v~~~~s~~~~~~iylV~ 106 (599)
+.||+|+||+||+|++..+++.||+|++..... .......+.+|.. +++.++|+||+++++++.. ...+|+||
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~-----~~~~~lv~ 75 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQT-----ADKLYFVL 75 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEc-----CCeEEEEE
Confidence 469999999999999999999999999874321 1222344555555 4678899999999999843 35799999
Q ss_pred ecCC-cCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCCCCCccc
Q 007541 107 ELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIF 185 (599)
Q Consensus 107 E~~~-g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~~~~~~ 185 (599)
||+. ++|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++....... .
T Consensus 76 e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~---~ 152 (325)
T cd05602 76 DYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNG---T 152 (325)
T ss_pred eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEEccCCCCcccccCCC---C
Confidence 9999 59999998888899999999999999999999999999999999999999999999999999975322211 1
Q ss_pred ccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHhhhhhhh
Q 007541 186 WTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVCLLLNII 265 (599)
Q Consensus 186 ~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~~~~~~~ 265 (599)
....+||+.|+|||++.+ ..++.++|||||||++|+|++|++||.+.+....+..+..
T Consensus 153 ~~~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~-------------------- 210 (325)
T cd05602 153 TSTFCGTPEYLAPEVLHK--QPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILN-------------------- 210 (325)
T ss_pred cccccCCccccCHHHHcC--CCCCCccccccccHHHHHHhcCCCCCCCCCHHHHHHHHHh--------------------
Confidence 245679999999999876 6789999999999999999999999988765544333221
Q ss_pred hcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCC
Q 007541 266 WCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKD 345 (599)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL~~DP~~ 345 (599)
.+ ....+..++.+.+||++||+.||.+
T Consensus 211 --------------------------------------------------~~---~~~~~~~~~~~~~li~~~l~~~p~~ 237 (325)
T cd05602 211 --------------------------------------------------KP---LQLKPNITNSARHLLEGLLQKDRTK 237 (325)
T ss_pred --------------------------------------------------CC---cCCCCCCCHHHHHHHHHHcccCHHH
Confidence 00 0122467889999999999999999
Q ss_pred CCCHH----HHhcCccccCc
Q 007541 346 RPTAE----EALADPYFKGL 361 (599)
Q Consensus 346 RpTa~----e~L~HP~f~~~ 361 (599)
|+++. ++++|+||..+
T Consensus 238 R~~~~~~~~~i~~~~~~~~~ 257 (325)
T cd05602 238 RLGAKDDFMEIKNHIFFSPI 257 (325)
T ss_pred CCCCCCCHHHHhcCcccCCC
Confidence 99876 89999999754
No 152
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=3.9e-42 Score=362.00 Aligned_cols=264 Identities=22% Similarity=0.372 Sum_probs=212.1
Q ss_pred CceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcc-cChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCcc
Q 007541 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIF-EHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKD 101 (599)
Q Consensus 23 ~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~-~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~ 101 (599)
++|++++.||+|+||.||++.++.+++.||||++.+.. ........+.+|+.+++.++|+||+++++++.. ...
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~-----~~~ 75 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQD-----ENY 75 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEc-----CCE
Confidence 57999999999999999999999999999999986421 122234457789999999999999999999843 357
Q ss_pred EEEEEecCC-cCHHHHHHh-CCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCC
Q 007541 102 IYVVFELME-SDLHQVIKA-NDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFND 179 (599)
Q Consensus 102 iylV~E~~~-g~L~~~i~~-~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~ 179 (599)
+|+||||+. |+|.+++.. ...+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 76 ~~lv~Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~ 155 (331)
T cd05624 76 LYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQD 155 (331)
T ss_pred EEEEEeCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEEcCCCCEEEEeccceeeccCC
Confidence 999999998 699999987 467999999999999999999999999999999999999999999999999999765332
Q ss_pred CCCcccccccccCccccCcccccccc---CCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHH
Q 007541 180 TPTAIFWTDYVATRWYRAPELCGSFF---SKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIA 256 (599)
Q Consensus 180 ~~~~~~~t~~~gt~~Y~APE~l~~~~---~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~ 256 (599)
... .....+||+.|+|||++.+.. ..++.++||||+||++|+|++|+.||.+.+..+.+..|....
T Consensus 156 ~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~--------- 224 (331)
T cd05624 156 GTV--QSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHE--------- 224 (331)
T ss_pred Cce--eeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHHHHHHHcCC---------
Confidence 211 112357899999999875421 357889999999999999999999998776554443332110
Q ss_pred HHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHH
Q 007541 257 RVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLE 336 (599)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~ 336 (599)
...++......+++.+.+||.
T Consensus 225 -----------------------------------------------------------~~~~~p~~~~~~~~~~~~li~ 245 (331)
T cd05624 225 -----------------------------------------------------------ERFQFPSHITDVSEEAKDLIQ 245 (331)
T ss_pred -----------------------------------------------------------CcccCCCccccCCHHHHHHHH
Confidence 111222333457889999999
Q ss_pred HhcccCCCC--CCCHHHHhcCccccCc
Q 007541 337 RMLAFEPKD--RPTAEEALADPYFKGL 361 (599)
Q Consensus 337 ~mL~~DP~~--RpTa~e~L~HP~f~~~ 361 (599)
+||..++.+ |++++++++||||++.
T Consensus 246 ~ll~~~~~~~~~~~~~~~~~h~~f~~~ 272 (331)
T cd05624 246 RLICSRERRLGQNGIEDFKKHAFFEGI 272 (331)
T ss_pred HHccCchhhcCCCCHHHHhcCCCcCCC
Confidence 999976655 5799999999999864
No 153
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=4.1e-43 Score=370.30 Aligned_cols=260 Identities=30% Similarity=0.461 Sum_probs=227.7
Q ss_pred CCCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCc
Q 007541 21 EGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFK 100 (599)
Q Consensus 21 ~~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~ 100 (599)
..++|.++++||+|+||.+++++++..++.||+|+|...............|+.++++++|||||.+++.|...+ .
T Consensus 2 ~m~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~----~ 77 (426)
T KOG0589|consen 2 EMDNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDG----Q 77 (426)
T ss_pred ccchhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCC----c
Confidence 457899999999999999999999999999999999865545555557789999999999999999999995433 3
Q ss_pred cEEEEEecCC-cCHHHHHHhCC--CCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCcccccc
Q 007541 101 DIYVVFELME-SDLHQVIKAND--DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAF 177 (599)
Q Consensus 101 ~iylV~E~~~-g~L~~~i~~~~--~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~ 177 (599)
.+||||+||+ |+|.+.|+... .++|+.+..++-||+.||.|||+++|+|||||+.|||++.++.|||+|||+|+...
T Consensus 78 ~l~Ivm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~ 157 (426)
T KOG0589|consen 78 LLCIVMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFLTKDKKVKLGDFGLAKILN 157 (426)
T ss_pred eEEEEEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhccccCceeecchhhhhhcC
Confidence 5999999999 59999997643 68999999999999999999999999999999999999999999999999999875
Q ss_pred CCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHH
Q 007541 178 NDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIAR 257 (599)
Q Consensus 178 ~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~ 257 (599)
+.. .+...++||+.|+.||++.+ ..|+.++|||||||++|||++-++.|.+.+......+|......|-+
T Consensus 158 ~~~---~~a~tvvGTp~YmcPEil~d--~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki~~~~~~Plp----- 227 (426)
T KOG0589|consen 158 PED---SLASTVVGTPYYMCPEILSD--IPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSELILKINRGLYSPLP----- 227 (426)
T ss_pred Cch---hhhheecCCCcccCHHHhCC--CCCCccCcchhhcchHHHHHhcccccCccchHHHHHHHhhccCCCCC-----
Confidence 543 13357899999999999988 79999999999999999999999999999988888877765543322
Q ss_pred HhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHH
Q 007541 258 VCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLER 337 (599)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~ 337 (599)
...+.++..||+.
T Consensus 228 -------------------------------------------------------------------~~ys~el~~lv~~ 240 (426)
T KOG0589|consen 228 -------------------------------------------------------------------SMYSSELRSLVKS 240 (426)
T ss_pred -------------------------------------------------------------------ccccHHHHHHHHH
Confidence 3467789999999
Q ss_pred hcccCCCCCCCHHHHhcCccccCc
Q 007541 338 MLAFEPKDRPTAEEALADPYFKGL 361 (599)
Q Consensus 338 mL~~DP~~RpTa~e~L~HP~f~~~ 361 (599)
||..+|..||+|.++|.+|.+...
T Consensus 241 ~l~~~P~~RPsa~~LL~~P~l~~~ 264 (426)
T KOG0589|consen 241 MLRKNPEHRPSALELLRRPHLLRY 264 (426)
T ss_pred HhhcCCccCCCHHHHhhChhhhhH
Confidence 999999999999999999887643
No 154
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.6e-44 Score=368.55 Aligned_cols=258 Identities=29% Similarity=0.453 Sum_probs=221.1
Q ss_pred CCCCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCC
Q 007541 20 GEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREF 99 (599)
Q Consensus 20 ~~~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~ 99 (599)
.....|..++.||+|+||.||+|+|..|++.||||++.... .....+.+.+|+.+|..++++||.++++.|+..+
T Consensus 10 ~~~~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~-~~deIediqqei~~Ls~~~~~~it~yygsyl~g~---- 84 (467)
T KOG0201|consen 10 DPELLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEE-AEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGT---- 84 (467)
T ss_pred CcccccccchhccccccceeeeeeeccccceEEEEEechhh-cchhhHHHHHHHHHHHhcCcchHHhhhhheeecc----
Confidence 44567888899999999999999999999999999997532 3345677889999999999999999999997654
Q ss_pred ccEEEEEecCC-cCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccC
Q 007541 100 KDIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFN 178 (599)
Q Consensus 100 ~~iylV~E~~~-g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~ 178 (599)
.++++||||. |++.++++..+.+.+.++..++++++.||.|||+.+.+|||||+.|||+..+|.+||+|||.+....+
T Consensus 85 -~LwiiMey~~gGsv~~lL~~~~~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~ 163 (467)
T KOG0201|consen 85 -KLWIIMEYCGGGSVLDLLKSGNILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLSESGDVKLADFGVAGQLTN 163 (467)
T ss_pred -cHHHHHHHhcCcchhhhhccCCCCccceeeeehHHHHHHhhhhhhcceecccccccceeEeccCcEEEEecceeeeeec
Confidence 6999999999 69999999988789999999999999999999999999999999999999999999999999987644
Q ss_pred CCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHH
Q 007541 179 DTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARV 258 (599)
Q Consensus 179 ~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~ 258 (599)
.... -.+.+||+.|||||++.. ..|+.++||||||++.+||++|.|||........+..
T Consensus 164 ~~~r---r~tfvGTPfwMAPEVI~~--~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlfl---------------- 222 (467)
T KOG0201|consen 164 TVKR---RKTFVGTPFWMAPEVIKQ--SGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLFL---------------- 222 (467)
T ss_pred hhhc---cccccccccccchhhhcc--ccccchhhhhhhhHHHHHHhcCCCCCcccCcceEEEe----------------
Confidence 3322 257799999999999986 7999999999999999999999999976554222111
Q ss_pred hhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHh
Q 007541 259 CLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERM 338 (599)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~m 338 (599)
+++..|..+. ..+++.+++|+..|
T Consensus 223 -----------------------------------------------------Ipk~~PP~L~---~~~S~~~kEFV~~C 246 (467)
T KOG0201|consen 223 -----------------------------------------------------IPKSAPPRLD---GDFSPPFKEFVEAC 246 (467)
T ss_pred -----------------------------------------------------ccCCCCCccc---cccCHHHHHHHHHH
Confidence 1222222222 36889999999999
Q ss_pred cccCCCCCCCHHHHhcCccccC
Q 007541 339 LAFEPKDRPTAEEALADPYFKG 360 (599)
Q Consensus 339 L~~DP~~RpTa~e~L~HP~f~~ 360 (599)
|+.||+.||||.++|.|+|++.
T Consensus 247 L~k~P~~RpsA~~LLKh~FIk~ 268 (467)
T KOG0201|consen 247 LDKNPEFRPSAKELLKHKFIKR 268 (467)
T ss_pred hhcCcccCcCHHHHhhhHHHHh
Confidence 9999999999999999999986
No 155
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=5.9e-42 Score=360.00 Aligned_cols=258 Identities=22% Similarity=0.391 Sum_probs=204.8
Q ss_pred EEEeecCceEEEEEEECCCCcEEEEEEecCccc-ChhhHHHHHHHHHHHHhc-CCCCccccceeecCCCcCCCccEEEEE
Q 007541 29 EVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFE-HVSDATRILREIKLLRLL-RHPDIVEIKHILLPPSRREFKDIYVVF 106 (599)
Q Consensus 29 ~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~-~~~~~~~i~rEi~iL~~l-~HpnIv~l~~v~~~~s~~~~~~iylV~ 106 (599)
+.||+|+||.||+|.+..+++.||+|+++.... .......+.+|+.++..+ +||||+.+++++.. ...+|+||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~-----~~~~~lv~ 75 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQT-----TSRLFLVI 75 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEe-----CCEEEEEE
Confidence 469999999999999999999999999975432 223455678999999888 59999999999843 34799999
Q ss_pred ecCC-cCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCCCCCccc
Q 007541 107 ELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIF 185 (599)
Q Consensus 107 E~~~-g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~~~~~~ 185 (599)
||+. ++|.+++...+.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++....... .
T Consensus 76 e~~~~~~L~~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~---~ 152 (327)
T cd05617 76 EYVNGGDLMFHMQRQRKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGD---T 152 (327)
T ss_pred eCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEeCCCCEEEeccccceeccCCCC---c
Confidence 9998 69999998888899999999999999999999999999999999999999999999999999975322111 1
Q ss_pred ccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHhhhhhhh
Q 007541 186 WTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVCLLLNII 265 (599)
Q Consensus 186 ~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~~~~~~~ 265 (599)
....+||+.|+|||++.+ ..++.++|||||||++|+|++|+.||......... ...+.
T Consensus 153 ~~~~~gt~~y~aPE~~~~--~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~---------~~~~~----------- 210 (327)
T cd05617 153 TSTFCGTPNYIAPEILRG--EEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDM---------NTEDY----------- 210 (327)
T ss_pred eecccCCcccCCHHHHCC--CCCCchheeehhHHHHHHHHhCCCCCCccCCCccc---------ccHHH-----------
Confidence 234679999999999876 68899999999999999999999999643211000 00000
Q ss_pred hcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCC
Q 007541 266 WCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKD 345 (599)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL~~DP~~ 345 (599)
....+. ..+.. .....+..+.+||.+||..||.+
T Consensus 211 ------------------------------------------~~~~~~-~~~~~---~p~~~~~~~~~li~~~L~~dP~~ 244 (327)
T cd05617 211 ------------------------------------------LFQVIL-EKPIR---IPRFLSVKASHVLKGFLNKDPKE 244 (327)
T ss_pred ------------------------------------------HHHHHH-hCCCC---CCCCCCHHHHHHHHHHhccCHHH
Confidence 000000 01111 12346788999999999999999
Q ss_pred CCC------HHHHhcCccccCcc
Q 007541 346 RPT------AEEALADPYFKGLA 362 (599)
Q Consensus 346 RpT------a~e~L~HP~f~~~~ 362 (599)
|++ ++++++||||.++.
T Consensus 245 R~~~~~~~~~~~i~~h~~f~~~~ 267 (327)
T cd05617 245 RLGCQPQTGFSDIKSHTFFRSID 267 (327)
T ss_pred cCCCCCCCCHHHHHcCCCCCCCC
Confidence 998 57999999998753
No 156
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-42 Score=345.26 Aligned_cols=279 Identities=25% Similarity=0.429 Sum_probs=221.4
Q ss_pred eEE-EEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcC-CCCccccceeecCCCcCCCccE
Q 007541 25 YKI-EEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLR-HPDIVEIKHILLPPSRREFKDI 102 (599)
Q Consensus 25 Y~i-~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~-HpnIv~l~~v~~~~s~~~~~~i 102 (599)
|++ .+.||+|+|+.|--|....||..||||+|.+. ......+++||++++.+++ |+||+.|+++|. +...+
T Consensus 79 YkLt~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq--~gHsR~RvfREVe~f~~Cqgh~nilqLiefFE-----dd~~F 151 (463)
T KOG0607|consen 79 YKLTSELLGEGAYASVQTCVSIQTGKEYAVKIIDKQ--PGHSRSRVFREVETFYQCQGHKNILQLIEFFE-----DDTRF 151 (463)
T ss_pred HHhHHHHhcCccceeeeeeeeeccchhhhhhhhhcC--CchHHHHHHHHHHHHHHhcCCccHHHHHHHhc-----ccceE
Confidence 444 37899999999999999999999999999875 2335678999999999997 999999999994 44579
Q ss_pred EEEEecCC-cCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCC---CceeeeccCccccccC
Q 007541 103 YVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANAD---CKLKICDFGLARVAFN 178 (599)
Q Consensus 103 ylV~E~~~-g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~---~~lKL~DFGlA~~~~~ 178 (599)
|||||-|. |.|.+.|.....++|.++..++..|..||+|||.+||.||||||+|||.... +-+|||||.|+.....
T Consensus 152 YLVfEKm~GGplLshI~~~~~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~ 231 (463)
T KOG0607|consen 152 YLVFEKMRGGPLLSHIQKRKHFNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKL 231 (463)
T ss_pred EEEEecccCchHHHHHHHhhhccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCCCcCceeeecccccccccc
Confidence 99999999 5999999999999999999999999999999999999999999999998765 4589999998754322
Q ss_pred CCC----CcccccccccCccccCccccc---cccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCC
Q 007541 179 DTP----TAIFWTDYVATRWYRAPELCG---SFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPS 251 (599)
Q Consensus 179 ~~~----~~~~~t~~~gt~~Y~APE~l~---~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~ 251 (599)
..+ ....+.+.+|+..|||||+.. +....|+..+|.||||+|+|.||+|.+||.|.-..+
T Consensus 232 ~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~d------------- 298 (463)
T KOG0607|consen 232 NNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGAD------------- 298 (463)
T ss_pred CCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCc-------------
Confidence 211 112245678999999999753 223579999999999999999999999998754221
Q ss_pred HHHHHHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHH
Q 007541 252 PEAIARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLA 331 (599)
Q Consensus 252 ~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a 331 (599)
|||+.- +- =..-...+.+.+..........-|..+|.++
T Consensus 299 ---------------CGWdrG----------e~----------------Cr~CQ~~LFesIQEGkYeFPdkdWahIS~ea 337 (463)
T KOG0607|consen 299 ---------------CGWDRG----------EV----------------CRVCQNKLFESIQEGKYEFPDKDWAHISSEA 337 (463)
T ss_pred ---------------CCccCC----------Cc----------------cHHHHHHHHHHHhccCCcCChhhhHHhhHHH
Confidence 111110 00 0001123344444444444445577899999
Q ss_pred HHHHHHhcccCCCCCCCHHHHhcCccccCcccC
Q 007541 332 LRLLERMLAFEPKDRPTAEEALADPYFKGLAKV 364 (599)
Q Consensus 332 ~dLL~~mL~~DP~~RpTa~e~L~HP~f~~~~~~ 364 (599)
+|||..+|..|+..|.+|.++|+|||++.....
T Consensus 338 kdlisnLlvrda~~rlsa~~vlnhPw~~~~~~e 370 (463)
T KOG0607|consen 338 KDLISNLLVRDAKQRLSAAQVLNHPWVQRCAPE 370 (463)
T ss_pred HHHHHHHHhccHHhhhhhhhccCCccccccchh
Confidence 999999999999999999999999999987654
No 157
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=1.4e-41 Score=349.93 Aligned_cols=258 Identities=26% Similarity=0.416 Sum_probs=207.4
Q ss_pred ceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCccc-ChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccE
Q 007541 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFE-HVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDI 102 (599)
Q Consensus 24 rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~-~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~i 102 (599)
.|++.++||+|+||.||+|.+..+++.||+|++..... .......+.+|+.+|+.++|++|+.+++.+.. ...+
T Consensus 1 ~f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~-----~~~~ 75 (285)
T cd05630 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYET-----KDAL 75 (285)
T ss_pred CceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEec-----CCEE
Confidence 48889999999999999999999999999999864322 22233567789999999999999999998843 3479
Q ss_pred EEEEecCC-cCHHHHHHhC--CCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCC
Q 007541 103 YVVFELME-SDLHQVIKAN--DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFND 179 (599)
Q Consensus 103 ylV~E~~~-g~L~~~i~~~--~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~ 179 (599)
|+||||+. ++|.+++... ..+++..+..++.||+.||.|||+.||+||||||+|||++.++.++|+|||++......
T Consensus 76 ~lv~e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~ 155 (285)
T cd05630 76 CLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEG 155 (285)
T ss_pred EEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeccceeecCCC
Confidence 99999998 6899888653 35899999999999999999999999999999999999999999999999999764322
Q ss_pred CCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHh
Q 007541 180 TPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVC 259 (599)
Q Consensus 180 ~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~ 259 (599)
.. .....|+..|+|||++.+ ..++.++||||+||++|+|++|+.||.+.........+.
T Consensus 156 ~~----~~~~~g~~~y~aPE~~~~--~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~--------------- 214 (285)
T cd05630 156 QT----IKGRVGTVGYMAPEVVKN--ERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVE--------------- 214 (285)
T ss_pred cc----ccCCCCCccccChHHHcC--CCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHH---------------
Confidence 11 133478999999999876 678999999999999999999999997643211100000
Q ss_pred hhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHhc
Q 007541 260 LLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERML 339 (599)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL 339 (599)
..+..... ......++.+.+||.+||
T Consensus 215 -----------------------------------------------~~~~~~~~-------~~~~~~~~~~~~li~~~l 240 (285)
T cd05630 215 -----------------------------------------------RLVKEVQE-------EYSEKFSPDARSLCKMLL 240 (285)
T ss_pred -----------------------------------------------hhhhhhhh-------hcCccCCHHHHHHHHHHh
Confidence 00000000 112346788999999999
Q ss_pred ccCCCCCCC-----HHHHhcCccccCc
Q 007541 340 AFEPKDRPT-----AEEALADPYFKGL 361 (599)
Q Consensus 340 ~~DP~~RpT-----a~e~L~HP~f~~~ 361 (599)
++||.+|+| ++|+++||||+++
T Consensus 241 ~~~p~~R~s~~~~~~~~~~~h~~~~~~ 267 (285)
T cd05630 241 CKDPKERLGCQGGGAREVKEHPLFKQI 267 (285)
T ss_pred hcCHHHccCCCCCchHHHHcChhhhcc
Confidence 999999999 9999999999864
No 158
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=100.00 E-value=1.3e-41 Score=346.75 Aligned_cols=281 Identities=43% Similarity=0.739 Sum_probs=231.7
Q ss_pred eEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEEE
Q 007541 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYV 104 (599)
Q Consensus 25 Y~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~iyl 104 (599)
|++.+.||+|++|.||+|.+..+++.||+|++............+.+|+.+++.++|+||+++++++... ..+|+
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-----~~~~~ 75 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTE-----RKLYL 75 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcC-----CceEE
Confidence 6788999999999999999999999999999976543334456677899999999999999999998543 57999
Q ss_pred EEecCCcCHHHHHHhC-CCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCCCCCc
Q 007541 105 VFELMESDLHQVIKAN-DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTA 183 (599)
Q Consensus 105 V~E~~~g~L~~~i~~~-~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~~~~ 183 (599)
||||++++|.+++... ..+++..+..++.||+.||.|||+.||+||||+|+||+++.++.+||+|||+++.......
T Consensus 76 v~e~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~-- 153 (282)
T cd07829 76 VFEYCDMDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILINRDGVLKLADFGLARAFGIPLR-- 153 (282)
T ss_pred EecCcCcCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEEcCCCCEEEecCCcccccCCCcc--
Confidence 9999999999999876 5799999999999999999999999999999999999999999999999999976533221
Q ss_pred ccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHhhhhh
Q 007541 184 IFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVCLLLN 263 (599)
Q Consensus 184 ~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~~~~~ 263 (599)
.......+.+|+|||.+... ..++.++||||+||++++|++|+++|.+.+..+.+..+...++.+....+.......
T Consensus 154 -~~~~~~~~~~~~aPE~~~~~-~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 230 (282)
T cd07829 154 -TYTHEVVTLWYRAPEILLGS-KHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLP- 230 (282)
T ss_pred -ccCccccCcCcCChHHhcCC-cCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhcccc-
Confidence 12334567889999988652 478899999999999999999999999999999999999999998887665421110
Q ss_pred hhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHhcccCC
Q 007541 264 IIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEP 343 (599)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL~~DP 343 (599)
.+-..+...........++..+..+.+||++||..||
T Consensus 231 -------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P 267 (282)
T cd07829 231 -------------------------------------------DYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNP 267 (282)
T ss_pred -------------------------------------------cccccccccCccchHHhcccccHHHHHHHHHhhccCc
Confidence 0000011111222234456678899999999999999
Q ss_pred CCCCCHHHHhcCccc
Q 007541 344 KDRPTAEEALADPYF 358 (599)
Q Consensus 344 ~~RpTa~e~L~HP~f 358 (599)
.+||++++++.||||
T Consensus 268 ~~Rp~~~~~l~~p~~ 282 (282)
T cd07829 268 AKRISAKEALKHPYF 282 (282)
T ss_pred ccCCCHHHHhhCcCC
Confidence 999999999999998
No 159
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=4.6e-41 Score=338.36 Aligned_cols=254 Identities=29% Similarity=0.475 Sum_probs=209.9
Q ss_pred ceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEE
Q 007541 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIY 103 (599)
Q Consensus 24 rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~iy 103 (599)
.|++++.||+|++|.||++.++.+++.||+|++............+.+|+.+++.++|+|++++.+.+.. ....+|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~----~~~~~~ 76 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEG----EDGLLY 76 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecC----CCCEEE
Confidence 5999999999999999999999999999999997544444455678899999999999999999887742 223689
Q ss_pred EEEecCC-cCHHHHHHhC--CCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCCC
Q 007541 104 VVFELME-SDLHQVIKAN--DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT 180 (599)
Q Consensus 104 lV~E~~~-g~L~~~i~~~--~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~ 180 (599)
+||||+. ++|.+++... ..+++..++.++.||+.||.+||+.||+|+||||+|||++.++.++|+|||++....+..
T Consensus 77 lv~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~ 156 (257)
T cd08223 77 IVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQC 156 (257)
T ss_pred EEecccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEEecCCcEEEecccceEEecccC
Confidence 9999998 5899998763 358999999999999999999999999999999999999999999999999998653322
Q ss_pred CCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHhh
Q 007541 181 PTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVCL 260 (599)
Q Consensus 181 ~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~~ 260 (599)
. ......++..|+|||++.+ ..++.++|+||+||++++|++|+.||.+.+.......+.. |
T Consensus 157 ~---~~~~~~~~~~y~aPE~~~~--~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~--~------------ 217 (257)
T cd08223 157 D---MASTLIGTPYYMSPELFSN--KPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIE--G------------ 217 (257)
T ss_pred C---ccccccCCcCccChhHhcC--CCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHh--c------------
Confidence 1 2234568889999999876 6788999999999999999999999987654333222211 0
Q ss_pred hhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHhcc
Q 007541 261 LLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLA 340 (599)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL~ 340 (599)
.+.......++.+.+||.+||+
T Consensus 218 ----------------------------------------------------------~~~~~~~~~~~~~~~li~~~l~ 239 (257)
T cd08223 218 ----------------------------------------------------------KLPPMPKDYSPELGELIATMLS 239 (257)
T ss_pred ----------------------------------------------------------CCCCCccccCHHHHHHHHHHhc
Confidence 0001123467889999999999
Q ss_pred cCCCCCCCHHHHhcCccc
Q 007541 341 FEPKDRPTAEEALADPYF 358 (599)
Q Consensus 341 ~DP~~RpTa~e~L~HP~f 358 (599)
.||.+|||+.++|+||||
T Consensus 240 ~~p~~Rp~~~~~l~~~~~ 257 (257)
T cd08223 240 KRPEKRPSVKSILRQPYI 257 (257)
T ss_pred cCcccCCCHHHHhcCCCC
Confidence 999999999999999997
No 160
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=2e-41 Score=349.82 Aligned_cols=291 Identities=38% Similarity=0.632 Sum_probs=228.5
Q ss_pred CCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCC-----c
Q 007541 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPS-----R 96 (599)
Q Consensus 22 ~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s-----~ 96 (599)
.++|++.+.||+|++|.||+|.++.+|+.||||+++...........+.+|+.+++.++||||+++++++.... .
T Consensus 6 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~~ 85 (302)
T cd07864 6 VDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALDFK 85 (302)
T ss_pred hhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhhcc
Confidence 57899999999999999999999999999999998754333333456678999999999999999999986542 1
Q ss_pred CCCccEEEEEecCCcCHHHHHHhC-CCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCcccc
Q 007541 97 REFKDIYVVFELMESDLHQVIKAN-DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARV 175 (599)
Q Consensus 97 ~~~~~iylV~E~~~g~L~~~i~~~-~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~ 175 (599)
.+...+|+|+||++++|.+++... ..+++..+..++.||+.||.|||+.||+|+||||+||+++.++.+||+|||++..
T Consensus 86 ~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~ 165 (302)
T cd07864 86 KDKGAFYLVFEYMDHDLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLNNKGQIKLADFGLARL 165 (302)
T ss_pred ccCCcEEEEEcccCccHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCcEEeCccccccc
Confidence 123479999999999998888764 4689999999999999999999999999999999999999999999999999986
Q ss_pred ccCCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHH
Q 007541 176 AFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAI 255 (599)
Q Consensus 176 ~~~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i 255 (599)
....... ......++..|+|||.+.+. ..++.++||||+||++++|++|+++|...+..+.+..+....|.+.+..+
T Consensus 166 ~~~~~~~--~~~~~~~~~~y~~PE~~~~~-~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (302)
T cd07864 166 YNSEESR--PYTNKVITLWYRPPELLLGE-ERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCGSPCPAVW 242 (302)
T ss_pred ccCCccc--ccccceeccCccChHHhcCC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhc
Confidence 5433211 12233567789999987542 45788999999999999999999999999988999999988888877544
Q ss_pred HHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHH
Q 007541 256 ARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLL 335 (599)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL 335 (599)
........ |...+. . ..........+..++..+.+||
T Consensus 243 ~~~~~~~~--~~~~~~----------------------------------------~-~~~~~~~~~~~~~~~~~~~~li 279 (302)
T cd07864 243 PDVIKLPY--FNTMKP----------------------------------------K-KQYRRRLREEFSFIPTPALDLL 279 (302)
T ss_pred cccccccc--cccccc----------------------------------------c-cccccchhhhcCCCCHHHHHHH
Confidence 32110000 000000 0 0000111123345678899999
Q ss_pred HHhcccCCCCCCCHHHHhcCccc
Q 007541 336 ERMLAFEPKDRPTAEEALADPYF 358 (599)
Q Consensus 336 ~~mL~~DP~~RpTa~e~L~HP~f 358 (599)
.+||+.||.+|||+.++|.||||
T Consensus 280 ~~~l~~~P~~Rp~~~~il~~~~~ 302 (302)
T cd07864 280 DHMLTLDPSKRCTAEEALNSPWL 302 (302)
T ss_pred HHHccCChhhCCCHHHHhcCCCC
Confidence 99999999999999999999997
No 161
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=2.2e-41 Score=345.54 Aligned_cols=285 Identities=39% Similarity=0.667 Sum_probs=227.4
Q ss_pred eEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEEE
Q 007541 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYV 104 (599)
Q Consensus 25 Y~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~iyl 104 (599)
|++++.||.|+||.||+|.+..+|+.||+|++............+.+|+.+++.++|+|++++++++.... ...+|+
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~---~~~~~l 77 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKG---KGSIYM 77 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCC---CCcEEE
Confidence 78999999999999999999999999999999865433344566789999999999999999999985431 257999
Q ss_pred EEecCCcCHHHHHHhC-CCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCCCCCc
Q 007541 105 VFELMESDLHQVIKAN-DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTA 183 (599)
Q Consensus 105 V~E~~~g~L~~~i~~~-~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~~~~ 183 (599)
|+||++++|.+++... ..+++..++.++.||+.||+|||+.|++|+||||+|||++.++.+||+|||++........
T Consensus 78 v~e~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~-- 155 (287)
T cd07840 78 VFEYMDHDLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILINNDGVLKLADFGLARPYTKRNS-- 155 (287)
T ss_pred EeccccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEcCCCCEEEccccceeeccCCCc--
Confidence 9999999999998765 5799999999999999999999999999999999999999999999999999987643321
Q ss_pred ccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHhhhhh
Q 007541 184 IFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVCLLLN 263 (599)
Q Consensus 184 ~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~~~~~ 263 (599)
...+...++.+|+|||.+.+. ..++.++||||+||++++|++|+.||.+.+....+..+.+..+.+....+........
T Consensus 156 ~~~~~~~~~~~y~~PE~~~~~-~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (287)
T cd07840 156 ADYTNRVITLWYRPPELLLGA-TRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPW 234 (287)
T ss_pred ccccccccccccCCceeeEcc-ccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccccchh
Confidence 112344678899999977542 4688999999999999999999999999998888999998888887765433110000
Q ss_pred hhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCC-CCHHHHHHHHHhcccC
Q 007541 264 IIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPN-ANPLALRLLERMLAFE 342 (599)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~s~~a~dLL~~mL~~D 342 (599)
+.... . .. ..+..+...+.. .++.+.++|.+||++|
T Consensus 235 --~~~~~-----------------------------~-~~-----------~~~~~~~~~~~~~~~~~~~~~i~~~l~~~ 271 (287)
T cd07840 235 --FENLK-----------------------------P-KK-----------PYKRRLREFFKHLIDPSALDLLDKLLTLD 271 (287)
T ss_pred --hhhcc-----------------------------c-cc-----------cchhHHHHHhcccCCHHHHHHHHHHcCCC
Confidence 00000 0 00 000001112223 3788999999999999
Q ss_pred CCCCCCHHHHhcCccc
Q 007541 343 PKDRPTAEEALADPYF 358 (599)
Q Consensus 343 P~~RpTa~e~L~HP~f 358 (599)
|.+|||++++|+||||
T Consensus 272 P~~Rp~~~~~l~~~~~ 287 (287)
T cd07840 272 PKKRISADQALQHEYF 287 (287)
T ss_pred hhhCcCHHHHhhCcCC
Confidence 9999999999999998
No 162
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=2.8e-41 Score=373.13 Aligned_cols=258 Identities=24% Similarity=0.323 Sum_probs=211.8
Q ss_pred CCceEEEEEEeecCceEEEEEEECCC-CcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCc
Q 007541 22 GSRYKIEEVIGKGSYGVVCSAYDTRT-GEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFK 100 (599)
Q Consensus 22 ~~rY~i~~~LG~G~~g~V~~a~d~~t-g~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~ 100 (599)
...|.+.+.||+|++|.||+|.+..+ ++.||+|++... .......+.+|+.+|+.++||||+++++++.. ..
T Consensus 66 ~~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~--~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~-----~~ 138 (478)
T PTZ00267 66 EHMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLN--DERQAAYARSELHCLAACDHFGIVKHFDDFKS-----DD 138 (478)
T ss_pred ceeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccC--CHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEE-----CC
Confidence 34599999999999999999999888 788999987532 23344567789999999999999999999843 35
Q ss_pred cEEEEEecCC-cCHHHHHHh----CCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCcccc
Q 007541 101 DIYVVFELME-SDLHQVIKA----NDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARV 175 (599)
Q Consensus 101 ~iylV~E~~~-g~L~~~i~~----~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~ 175 (599)
++||||||+. ++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.
T Consensus 139 ~~~lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~~~~~kL~DFgla~~ 218 (478)
T PTZ00267 139 KLLLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQ 218 (478)
T ss_pred EEEEEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEECCCCcEEEEeCcCcee
Confidence 7999999998 699887754 34689999999999999999999999999999999999999999999999999986
Q ss_pred ccCCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHH
Q 007541 176 AFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAI 255 (599)
Q Consensus 176 ~~~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i 255 (599)
...... .......+||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+..+.+..+.. |.
T Consensus 219 ~~~~~~-~~~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~~~~~~~~--~~------ 287 (478)
T PTZ00267 219 YSDSVS-LDVASSFCGTPYYLAPELWER--KRYSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQVLY--GK------ 287 (478)
T ss_pred cCCccc-cccccccCCCccccCHhHhCC--CCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh--CC------
Confidence 533221 112345679999999999877 6799999999999999999999999987665444333321 00
Q ss_pred HHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHH
Q 007541 256 ARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLL 335 (599)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL 335 (599)
. ......+++.+.+||
T Consensus 288 -------------------------------------------------------------~---~~~~~~~s~~~~~li 303 (478)
T PTZ00267 288 -------------------------------------------------------------Y---DPFPCPVSSGMKALL 303 (478)
T ss_pred -------------------------------------------------------------C---CCCCccCCHHHHHHH
Confidence 0 001124678899999
Q ss_pred HHhcccCCCCCCCHHHHhcCccccCc
Q 007541 336 ERMLAFEPKDRPTAEEALADPYFKGL 361 (599)
Q Consensus 336 ~~mL~~DP~~RpTa~e~L~HP~f~~~ 361 (599)
.+||..||++|||++++|.|+|++.+
T Consensus 304 ~~~L~~dP~~Rps~~~~l~~~~~~~~ 329 (478)
T PTZ00267 304 DPLLSKNPALRPTTQQLLHTEFLKYV 329 (478)
T ss_pred HHHhccChhhCcCHHHHHhCHHHHHH
Confidence 99999999999999999999999754
No 163
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=2.8e-41 Score=388.96 Aligned_cols=263 Identities=27% Similarity=0.410 Sum_probs=213.0
Q ss_pred CCCCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCC
Q 007541 20 GEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREF 99 (599)
Q Consensus 20 ~~~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~ 99 (599)
...++|++++.||+|+||+||+|.++.++..||+|++............+.+|+.+|+.|+||||++++++|... ..
T Consensus 10 ~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de---~~ 86 (1021)
T PTZ00266 10 SRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNK---AN 86 (1021)
T ss_pred cccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEec---CC
Confidence 445799999999999999999999999999999999976544445567788999999999999999999998643 23
Q ss_pred ccEEEEEecCC-cCHHHHHHh----CCCCCHHHHHHHHHHHHhhhhhcccC-------ceEeecCCCCcEEeCC------
Q 007541 100 KDIYVVFELME-SDLHQVIKA----NDDLTPEHYQFFLYQLLRGLKYIHTA-------NVFHRDLKPKNILANA------ 161 (599)
Q Consensus 100 ~~iylV~E~~~-g~L~~~i~~----~~~lse~~i~~i~~QLl~aL~yLHs~-------gIvHrDLKP~NILv~~------ 161 (599)
..+||||||+. ++|.++|.. .+.+++..++.|+.||+.||.|||+. +||||||||+||||+.
T Consensus 87 ~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg 166 (1021)
T PTZ00266 87 QKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIG 166 (1021)
T ss_pred CEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccc
Confidence 47999999999 699998865 35799999999999999999999985 4999999999999964
Q ss_pred -----------CCceeeeccCccccccCCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCC
Q 007541 162 -----------DCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPL 230 (599)
Q Consensus 162 -----------~~~lKL~DFGlA~~~~~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~p 230 (599)
.+.+||+|||+++...... .....++|+.|+|||++.+....++.++||||||||||+|++|+.|
T Consensus 167 ~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s----~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~P 242 (1021)
T PTZ00266 167 KITAQANNLNGRPIAKIGDFGLSKNIGIES----MAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTP 242 (1021)
T ss_pred cccccccccCCCCceEEccCCccccccccc----cccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCC
Confidence 2448999999997653221 1234579999999999865335688999999999999999999999
Q ss_pred CCCCChhhHHHHHHHhcCCCCHHHHHHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHH
Q 007541 231 FPGKNVVHQLDIMTDLLGTPSPEAIARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLS 310 (599)
Q Consensus 231 F~g~~~~~~l~~I~~~lG~p~~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (599)
|...+...++..+..
T Consensus 243 F~~~~~~~qli~~lk----------------------------------------------------------------- 257 (1021)
T PTZ00266 243 FHKANNFSQLISELK----------------------------------------------------------------- 257 (1021)
T ss_pred CCcCCcHHHHHHHHh-----------------------------------------------------------------
Confidence 976554332221110
Q ss_pred hcccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccccCc
Q 007541 311 SMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGL 361 (599)
Q Consensus 311 ~~~~~~~~~~~~~~~~~s~~a~dLL~~mL~~DP~~RpTa~e~L~HP~f~~~ 361 (599)
..... .....+..+.+||.+||.+||.+|||+.|+|.||||+.+
T Consensus 258 ---~~p~l----pi~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h~~ik~i 301 (1021)
T PTZ00266 258 ---RGPDL----PIKGKSKELNILIKNLLNLSAKERPSALQCLGYQIIKNV 301 (1021)
T ss_pred ---cCCCC----CcCCCCHHHHHHHHHHhcCChhHCcCHHHHhccHHHhhc
Confidence 00000 113457889999999999999999999999999999754
No 164
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=4.9e-41 Score=343.38 Aligned_cols=282 Identities=40% Similarity=0.649 Sum_probs=224.0
Q ss_pred eEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhc---CCCCccccceeecCCCcCCCcc
Q 007541 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLL---RHPDIVEIKHILLPPSRREFKD 101 (599)
Q Consensus 25 Y~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l---~HpnIv~l~~v~~~~s~~~~~~ 101 (599)
|++.+.||+|++|.||+|.++.+++.||||++............+.+|+.+++++ +|+||+++++++..........
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 7899999999999999999999999999999975433333344566788887776 5999999999997654333446
Q ss_pred EEEEEecCCcCHHHHHHhCC--CCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCC
Q 007541 102 IYVVFELMESDLHQVIKAND--DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFND 179 (599)
Q Consensus 102 iylV~E~~~g~L~~~i~~~~--~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~ 179 (599)
+|+||||+.++|.+++.... .+++..++.++.||+.||.|||+.||+|+||+|+|||++.++.+||+|||++......
T Consensus 81 ~~l~~e~~~~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili~~~~~~~l~dfg~~~~~~~~ 160 (287)
T cd07838 81 LTLVFEHVDQDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVTSDGQVKIADFGLARIYSFE 160 (287)
T ss_pred eEEEehhcccCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEEccCCCEEEeccCcceeccCC
Confidence 99999999999999887643 5899999999999999999999999999999999999999999999999999775332
Q ss_pred CCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHh
Q 007541 180 TPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVC 259 (599)
Q Consensus 180 ~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~ 259 (599)
.. .....++..|+|||++.+ ..++.++||||+||++++|++|+++|.+.+..+.+..+.+..+.+....+...
T Consensus 161 ~~----~~~~~~~~~~~~PE~~~~--~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 233 (287)
T cd07838 161 MA----LTSVVVTLWYRAPEVLLQ--SSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRN- 233 (287)
T ss_pred cc----cccccccccccChHHhcc--CCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcCCC-
Confidence 21 233467889999999876 57889999999999999999999999999988888888877766544322110
Q ss_pred hhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHhc
Q 007541 260 LLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERML 339 (599)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL 339 (599)
.. .............+....+..++.+.+||.+||
T Consensus 234 ----------~~-----------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l 268 (287)
T cd07838 234 ----------VS-----------------------------------LPRSSFPSYTPRSFKSFVPEICEEGLDLLKKML 268 (287)
T ss_pred ----------cc-----------------------------------cchhhcccccccchhhhhhhhhHHHHHHHHHHh
Confidence 00 000001111122233344566788999999999
Q ss_pred ccCCCCCCCHHHHhcCccc
Q 007541 340 AFEPKDRPTAEEALADPYF 358 (599)
Q Consensus 340 ~~DP~~RpTa~e~L~HP~f 358 (599)
+.||.+|||++|+|.||||
T Consensus 269 ~~dp~~Rp~~~~il~~~~~ 287 (287)
T cd07838 269 TFNPHKRISAFEALQHPYF 287 (287)
T ss_pred ccCCccCCCHHHHhcCcCC
Confidence 9999999999999999998
No 165
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=2.6e-41 Score=354.59 Aligned_cols=298 Identities=22% Similarity=0.286 Sum_probs=209.0
Q ss_pred EEEEEeec--CceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEEE
Q 007541 27 IEEVIGKG--SYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYV 104 (599)
Q Consensus 27 i~~~LG~G--~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~iyl 104 (599)
++++||+| ++++||++.++.+|+.||||++............+.+|+.+++.++||||+++++++... ..+|+
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~-----~~~~l 76 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIAD-----NELWV 76 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEEC-----CEEEE
Confidence 56789999 778999999999999999999976544444456677899999999999999999998543 47899
Q ss_pred EEecCC-cCHHHHHHhC--CCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCCCC
Q 007541 105 VFELME-SDLHQVIKAN--DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTP 181 (599)
Q Consensus 105 V~E~~~-g~L~~~i~~~--~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~~ 181 (599)
||||++ ++|.+++..+ ..+++..++.++.||+.||+|||++||+||||||+|||++.++.++++||+.+........
T Consensus 77 v~e~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~ 156 (327)
T cd08227 77 VTSFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQ 156 (327)
T ss_pred EEeccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEEecCCcEEEcccchhhccccccc
Confidence 999999 6899998753 4689999999999999999999999999999999999999999999999987654321111
Q ss_pred Cc----ccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHH
Q 007541 182 TA----IFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIAR 257 (599)
Q Consensus 182 ~~----~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~ 257 (599)
.. .......++..|+|||++.+....|+.++||||+||++++|++|+.||.+........... .+..+. .+..
T Consensus 157 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~--~~~~~~-~~~~ 233 (327)
T cd08227 157 RLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKL--NGTVPC-LLDT 233 (327)
T ss_pred cccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHh--cCCccc-cccc
Confidence 00 0112235677899999986532468999999999999999999999998765433222221 111110 0000
Q ss_pred Hhhhh-----hhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhc-ccCCCCCCCCCCCCCCHHH
Q 007541 258 VCLLL-----NIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSM-RKKKPIPFSQKFPNANPLA 331 (599)
Q Consensus 258 ~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~s~~a 331 (599)
..... .....+.+..+. .. ...... ...............++.+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~---------------------------~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (327)
T cd08227 234 TTIPAEELTMKPSRSGANSGLG---------------------------ES---TTVSTPRPSNGESSSHPYNRTFSPHF 283 (327)
T ss_pred cchhhhhcccCCcccCCcCCCC---------------------------cc---cccCCcCccccCCcccccccccCHHH
Confidence 00000 000000000000 00 000000 0000011111223467899
Q ss_pred HHHHHHhcccCCCCCCCHHHHhcCccccCcc
Q 007541 332 LRLLERMLAFEPKDRPTAEEALADPYFKGLA 362 (599)
Q Consensus 332 ~dLL~~mL~~DP~~RpTa~e~L~HP~f~~~~ 362 (599)
.+||.+||++||++|||++|+|+||||+.+.
T Consensus 284 ~~li~~~l~~dP~~Rpt~~ell~~p~f~~~~ 314 (327)
T cd08227 284 HHFVEQCLQRNPDARPSASTLLNHSFFKQIK 314 (327)
T ss_pred HHHHHHHHhhCchhcCCHHHHhcChhhhhcc
Confidence 9999999999999999999999999998753
No 166
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=100.00 E-value=5.1e-41 Score=343.24 Aligned_cols=280 Identities=42% Similarity=0.718 Sum_probs=227.4
Q ss_pred eEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcC-CCCccccceeecCCCcCCCccEE
Q 007541 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLR-HPDIVEIKHILLPPSRREFKDIY 103 (599)
Q Consensus 25 Y~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~-HpnIv~l~~v~~~~s~~~~~~iy 103 (599)
|++.+.||+|++|+||+|.+..+++.||||++...... .......+|+..++.++ |+||+++++++.. ....|
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~-----~~~~~ 74 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYS-WEECMNLREVKSLRKLNEHPNIVKLKEVFRE-----NDELY 74 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccc-hhHHHHHHHHHHHHhccCCCCchhHHHHhhc-----CCcEE
Confidence 78899999999999999999999999999998754332 22334568999999999 9999999999854 35799
Q ss_pred EEEecCCcCHHHHHHhCC--CCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCCCC
Q 007541 104 VVFELMESDLHQVIKAND--DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTP 181 (599)
Q Consensus 104 lV~E~~~g~L~~~i~~~~--~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~~ 181 (599)
+||||++++|.+++.... .+++..+..++.||+.+|.|||++||+|+||+|+||+++.++.++|+|||++.......
T Consensus 75 lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~- 153 (283)
T cd07830 75 FVFEYMEGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRP- 153 (283)
T ss_pred EEEecCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCCEEEeecccceeccCCC-
Confidence 999999999999998764 78999999999999999999999999999999999999999999999999997653322
Q ss_pred CcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHhhh
Q 007541 182 TAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVCLL 261 (599)
Q Consensus 182 ~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~~~ 261 (599)
..+...++..|+|||++... ..++.++|+||+||++++|++|+++|++.+..+.+..+...+|.+..+.+......
T Consensus 154 ---~~~~~~~~~~~~aPE~~~~~-~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (283)
T cd07830 154 ---PYTDYVSTRWYRAPEILLRS-TSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKL 229 (283)
T ss_pred ---CcCCCCCcccccCceeeecC-cCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhh
Confidence 12446788999999987542 56889999999999999999999999999999999999999998887655431100
Q ss_pred hhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHhccc
Q 007541 262 LNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAF 341 (599)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL~~ 341 (599)
.... -..+...........++..+..+.+||++||+.
T Consensus 230 ~~~~-------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~ 266 (283)
T cd07830 230 ASKL-------------------------------------------GFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRW 266 (283)
T ss_pred hccc-------------------------------------------cccccccccccHHHHcccCCHHHHHHHHHhccc
Confidence 0000 000011111122233445578899999999999
Q ss_pred CCCCCCCHHHHhcCccc
Q 007541 342 EPKDRPTAEEALADPYF 358 (599)
Q Consensus 342 DP~~RpTa~e~L~HP~f 358 (599)
||.+|||++|++.||||
T Consensus 267 ~p~~Rpt~~ei~~~~~~ 283 (283)
T cd07830 267 DPKKRPTASQALQHPYF 283 (283)
T ss_pred CcccCCCHHHHhhCCCC
Confidence 99999999999999998
No 167
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=7.5e-41 Score=344.19 Aligned_cols=258 Identities=25% Similarity=0.399 Sum_probs=209.6
Q ss_pred ceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCccc-ChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccE
Q 007541 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFE-HVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDI 102 (599)
Q Consensus 24 rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~-~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~i 102 (599)
.|++.+.||+|+||+||+|.+..+++.||+|++..... .......+.+|+.+|+.++|+||+.+.+.+.. ...+
T Consensus 1 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~-----~~~~ 75 (285)
T cd05632 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYET-----KDAL 75 (285)
T ss_pred CceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEec-----CCEE
Confidence 48889999999999999999999999999999864322 22234457789999999999999999988843 3479
Q ss_pred EEEEecCC-cCHHHHHHhC--CCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCC
Q 007541 103 YVVFELME-SDLHQVIKAN--DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFND 179 (599)
Q Consensus 103 ylV~E~~~-g~L~~~i~~~--~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~ 179 (599)
|+||||+. ++|.+++... ..+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||++......
T Consensus 76 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~ 155 (285)
T cd05632 76 CLVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILLDDYGHIRISDLGLAVKIPEG 155 (285)
T ss_pred EEEEEeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEECCCCCEEEecCCcceecCCC
Confidence 99999999 5888887643 36999999999999999999999999999999999999999999999999999764322
Q ss_pred CCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHh
Q 007541 180 TPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVC 259 (599)
Q Consensus 180 ~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~ 259 (599)
. ......++..|+|||++.+ ..++.++|+||+||++++|++|..||.+.........+.....
T Consensus 156 ~----~~~~~~g~~~~~aPE~~~~--~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~----------- 218 (285)
T cd05632 156 E----SIRGRVGTVGYMAPEVLNN--QRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVL----------- 218 (285)
T ss_pred C----cccCCCCCcCccChHHhcC--CCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhh-----------
Confidence 1 1234578999999999876 6789999999999999999999999987654333222211000
Q ss_pred hhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHhc
Q 007541 260 LLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERML 339 (599)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL 339 (599)
.. . .......++.+.+|+.+||
T Consensus 219 ------------------------------------------------------~~-~---~~~~~~~~~~~~~li~~~l 240 (285)
T cd05632 219 ------------------------------------------------------ET-E---EVYSAKFSEEAKSICKMLL 240 (285)
T ss_pred ------------------------------------------------------cc-c---cccCccCCHHHHHHHHHHc
Confidence 00 0 0112346778999999999
Q ss_pred ccCCCCCCC-----HHHHhcCccccCc
Q 007541 340 AFEPKDRPT-----AEEALADPYFKGL 361 (599)
Q Consensus 340 ~~DP~~RpT-----a~e~L~HP~f~~~ 361 (599)
+.||++||| +.+++.|+||+..
T Consensus 241 ~~~P~~R~~~~~~~~~~l~~~~~~~~~ 267 (285)
T cd05632 241 TKDPKQRLGCQEEGAGEVKRHPFFRNM 267 (285)
T ss_pred cCCHhHcCCCcccChHHHHcChhhhcC
Confidence 999999999 8999999999876
No 168
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=3.7e-41 Score=355.96 Aligned_cols=253 Identities=31% Similarity=0.411 Sum_probs=206.5
Q ss_pred CCceEEEEEEeecCceEEEEEEECCCCcE-EEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCc
Q 007541 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGEK-VAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFK 100 (599)
Q Consensus 22 ~~rY~i~~~LG~G~~g~V~~a~d~~tg~~-vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~ 100 (599)
.....+.+.||+|+||+||++... |.. ||||++............+.+|+.+|..++|||||++++++..+..
T Consensus 40 ~~~l~~~~~iG~G~~g~V~~~~~~--g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~---- 113 (362)
T KOG0192|consen 40 PDELPIEEVLGSGSFGTVYKGKWR--GTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPG---- 113 (362)
T ss_pred hHHhhhhhhcccCCceeEEEEEeC--CceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC----
Confidence 455566777999999999999754 666 9999998644444446789999999999999999999999965421
Q ss_pred cEEEEEecCC-cCHHHHHHh--CCCCCHHHHHHHHHHHHhhhhhcccCc-eEeecCCCCcEEeCCCC-ceeeeccCcccc
Q 007541 101 DIYVVFELME-SDLHQVIKA--NDDLTPEHYQFFLYQLLRGLKYIHTAN-VFHRDLKPKNILANADC-KLKICDFGLARV 175 (599)
Q Consensus 101 ~iylV~E~~~-g~L~~~i~~--~~~lse~~i~~i~~QLl~aL~yLHs~g-IvHrDLKP~NILv~~~~-~lKL~DFGlA~~ 175 (599)
.++||||||. |+|.+++.. ...++...+..++.||++|+.|||+++ ||||||||+|||++.++ ++||||||+++.
T Consensus 114 ~~~iVtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~ 193 (362)
T KOG0192|consen 114 SLCIVTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVDLKGKTLKIADFGLSRE 193 (362)
T ss_pred ceEEEEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEcCCCCEEEECCCcccee
Confidence 6899999999 799999987 578999999999999999999999999 99999999999999998 999999999987
Q ss_pred ccCCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHH
Q 007541 176 AFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAI 255 (599)
Q Consensus 176 ~~~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i 255 (599)
..... ...+...||..|||||++......|+.++||||+|++++||+||+.||.+.........+....-
T Consensus 194 ~~~~~---~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~~v~~~~~------- 263 (362)
T KOG0192|consen 194 KVISK---TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQVASAVVVGGL------- 263 (362)
T ss_pred ecccc---ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCC-------
Confidence 54321 22345789999999999984126899999999999999999999999998776332222211000
Q ss_pred HHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHH
Q 007541 256 ARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLL 335 (599)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL 335 (599)
...+ ....++.+..||
T Consensus 264 -------------------------------------------------------------Rp~~---p~~~~~~l~~l~ 279 (362)
T KOG0192|consen 264 -------------------------------------------------------------RPPI---PKECPPHLSSLM 279 (362)
T ss_pred -------------------------------------------------------------CCCC---CccCCHHHHHHH
Confidence 0011 112677899999
Q ss_pred HHhcccCCCCCCCHHHHhc
Q 007541 336 ERMLAFEPKDRPTAEEALA 354 (599)
Q Consensus 336 ~~mL~~DP~~RpTa~e~L~ 354 (599)
++|+..||.+||+..+++.
T Consensus 280 ~~CW~~dp~~RP~f~ei~~ 298 (362)
T KOG0192|consen 280 ERCWLVDPSRRPSFLEIVS 298 (362)
T ss_pred HHhCCCCCCcCCCHHHHHH
Confidence 9999999999999999876
No 169
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=1.5e-40 Score=346.02 Aligned_cols=293 Identities=26% Similarity=0.368 Sum_probs=215.2
Q ss_pred CceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccE
Q 007541 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDI 102 (599)
Q Consensus 23 ~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~i 102 (599)
++|++.+.||+|+||.||++.+..++..||+|.+.... .......+.+|+.+|+.++||||+++++++.. ..++
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-----~~~~ 74 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEI-KPAIRNQIIRELKVLHECNSPYIVGFYGAFYS-----DGEI 74 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEecccc-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEee-----CCEE
Confidence 46999999999999999999999999999999986432 22344568899999999999999999999854 3579
Q ss_pred EEEEecCC-cCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhccc-CceEeecCCCCcEEeCCCCceeeeccCccccccCCC
Q 007541 103 YVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHT-ANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT 180 (599)
Q Consensus 103 ylV~E~~~-g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs-~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~ 180 (599)
|+||||++ ++|.+++...+.+++..+..++.||+.||.|||+ .+|+|+||||+|||++.++.+||+|||++.......
T Consensus 75 ~lv~ey~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~ 154 (308)
T cd06615 75 SICMEHMDGGSLDQVLKKAGRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM 154 (308)
T ss_pred EEEeeccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEecCCcEEEccCCCcccccccc
Confidence 99999998 5999999888889999999999999999999997 599999999999999999999999999987543221
Q ss_pred CCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHhh
Q 007541 181 PTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVCL 260 (599)
Q Consensus 181 ~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~~ 260 (599)
....+++..|+|||.+.+ ..++.++||||+||++++|++|+.||.+.+..... .+. +........
T Consensus 155 -----~~~~~~~~~~~aPE~~~~--~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~-~~~---~~~~~~~~~---- 219 (308)
T cd06615 155 -----ANSFVGTRSYMSPERLQG--THYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELE-AMF---GRPVSEGEA---- 219 (308)
T ss_pred -----cccCCCCcCccChhHhcC--CCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHH-Hhh---cCccccccc----
Confidence 134578999999999866 56889999999999999999999999876533222 111 111000000
Q ss_pred hhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHhcc
Q 007541 261 LLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLA 340 (599)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL~ 340 (599)
.... .......... .......+....+....+... .....+..+.+||.+||.
T Consensus 220 ------~~~~------~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~l~ 272 (308)
T cd06615 220 ------KESH------RPVSGHPPDS-------------PRPMAIFELLDYIVNEPPPKL--PSGAFSDEFQDFVDKCLK 272 (308)
T ss_pred ------cCCc------ccccCCCCCc-------------cchhhHHHHHHHHhcCCCccC--cCcccCHHHHHHHHHHcc
Confidence 0000 0000000000 000000011111111111110 112367889999999999
Q ss_pred cCCCCCCCHHHHhcCccccCccc
Q 007541 341 FEPKDRPTAEEALADPYFKGLAK 363 (599)
Q Consensus 341 ~DP~~RpTa~e~L~HP~f~~~~~ 363 (599)
.||++|||+.|+|+||||.++..
T Consensus 273 ~~P~~Rpt~~~ll~~~~~~~~~~ 295 (308)
T cd06615 273 KNPKERADLKELTKHPFIKRAEL 295 (308)
T ss_pred CChhhCcCHHHHhcChhhhhccc
Confidence 99999999999999999987643
No 170
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=3.3e-41 Score=345.42 Aligned_cols=253 Identities=25% Similarity=0.387 Sum_probs=200.2
Q ss_pred EeecCceEEEEEEECCCCcEEEEEEecCcccC-hhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEEEEEecC
Q 007541 31 IGKGSYGVVCSAYDTRTGEKVAIKKINDIFEH-VSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVVFELM 109 (599)
Q Consensus 31 LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~-~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~iylV~E~~ 109 (599)
||+|+||.||++.++.+|+.||+|++...... ......+..|+.+|+.++||||+++.+++.. ..++|+||||+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~-----~~~~~lv~e~~ 75 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFES-----KTHLCLVMSLM 75 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEec-----CCeEEEEEecC
Confidence 69999999999999999999999998643222 1223345679999999999999999999843 35799999999
Q ss_pred C-cCHHHHHHhCC--CCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCCCCCcccc
Q 007541 110 E-SDLHQVIKAND--DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFW 186 (599)
Q Consensus 110 ~-g~L~~~i~~~~--~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~~~~~~~ 186 (599)
. ++|.+++...+ .+++..+..++.||+.||+|||+.||+||||||+|||++.++.+||+|||++....... ..
T Consensus 76 ~g~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~----~~ 151 (277)
T cd05607 76 NGGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGK----TI 151 (277)
T ss_pred CCCCHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEEcCCCCEEEeeceeeeecCCCc----ee
Confidence 8 58988886543 58899999999999999999999999999999999999999999999999997653322 12
Q ss_pred cccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHhhhhhhhh
Q 007541 187 TDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVCLLLNIIW 266 (599)
Q Consensus 187 t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~~~~~~~~ 266 (599)
....++..|+|||++.+ ..++.++||||+||++|+|++|+.||.+.........+.
T Consensus 152 ~~~~~~~~y~aPE~~~~--~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~---------------------- 207 (277)
T cd05607 152 TQRAGTNGYMAPEILKE--EPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELK---------------------- 207 (277)
T ss_pred eccCCCCCccCHHHHcc--CCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHH----------------------
Confidence 34578899999999876 569999999999999999999999997643211100000
Q ss_pred cCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCC
Q 007541 267 CGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDR 346 (599)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL~~DP~~R 346 (599)
+..+ . . ........+++.+.+||.+||+.||.+|
T Consensus 208 ---------------------------------------~~~~----~-~--~~~~~~~~~~~~~~~li~~~L~~~P~~R 241 (277)
T cd05607 208 ---------------------------------------RRTL----E-D--EVKFEHQNFTEESKDICRLFLAKKPEDR 241 (277)
T ss_pred ---------------------------------------HHhh----c-c--ccccccccCCHHHHHHHHHHhccCHhhC
Confidence 0000 0 0 0001123578889999999999999999
Q ss_pred CCH----HHHhcCccccCcc
Q 007541 347 PTA----EEALADPYFKGLA 362 (599)
Q Consensus 347 pTa----~e~L~HP~f~~~~ 362 (599)
||+ ++++.||||+++.
T Consensus 242 ~~~~~~~~~~~~h~~f~~~~ 261 (277)
T cd05607 242 LGSREKNDDPRKHEFFKTIN 261 (277)
T ss_pred CCCccchhhhhcChhhcCCC
Confidence 999 7788999998753
No 171
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=1.1e-40 Score=343.49 Aligned_cols=254 Identities=25% Similarity=0.461 Sum_probs=213.5
Q ss_pred CceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcc-cChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCcc
Q 007541 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIF-EHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKD 101 (599)
Q Consensus 23 ~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~-~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~ 101 (599)
++|++.+.||+|++|.||+|.+..+++.||+|++.... ........+.+|+.+|+.++||||+++++++.. ...
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~ 75 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQD-----DSN 75 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEc-----CCe
Confidence 47999999999999999999999999999999986432 223345678899999999999999999999843 357
Q ss_pred EEEEEecCC-cCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCCC
Q 007541 102 IYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT 180 (599)
Q Consensus 102 iylV~E~~~-g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~ 180 (599)
+|+||||+. ++|.+++...+.+++..++.++.||+.||.|||++||+|+||+|.|||++.++.+||+|||++......
T Consensus 76 ~~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~- 154 (290)
T cd05580 76 LYLVMEYVPGGELFSHLRKSGRFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR- 154 (290)
T ss_pred EEEEEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEeeCCCccccCCC-
Confidence 999999995 799999998888999999999999999999999999999999999999999999999999999875433
Q ss_pred CCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHhh
Q 007541 181 PTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVCL 260 (599)
Q Consensus 181 ~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~~ 260 (599)
.....++..|+|||.+.+ ..++.++|||||||++++|++|+.||.+.+.......+.. +
T Consensus 155 -----~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~--~------------ 213 (290)
T cd05580 155 -----TYTLCGTPEYLAPEIILS--KGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKILE--G------------ 213 (290)
T ss_pred -----CCCCCCCccccChhhhcC--CCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc--C------------
Confidence 123468899999998866 5688999999999999999999999987664332222210 0
Q ss_pred hhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHhcc
Q 007541 261 LLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLA 340 (599)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL~ 340 (599)
... .....++.+.+||.+||.
T Consensus 214 --------------------------------------------------------~~~---~~~~~~~~l~~li~~~l~ 234 (290)
T cd05580 214 --------------------------------------------------------KVR---FPSFFSPDAKDLIRNLLQ 234 (290)
T ss_pred --------------------------------------------------------Ccc---CCccCCHHHHHHHHHHcc
Confidence 000 112357889999999999
Q ss_pred cCCCCCC-----CHHHHhcCccccCcc
Q 007541 341 FEPKDRP-----TAEEALADPYFKGLA 362 (599)
Q Consensus 341 ~DP~~Rp-----Ta~e~L~HP~f~~~~ 362 (599)
.||.+|+ +++|+++||||+.+.
T Consensus 235 ~~p~~R~~~~~~~~~~l~~~~~~~~~~ 261 (290)
T cd05580 235 VDLTKRLGNLKNGVNDIKNHPWFAGID 261 (290)
T ss_pred CCHHHccCcccCCHHHHHcCcccccCC
Confidence 9999999 999999999998753
No 172
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=1.1e-40 Score=338.62 Aligned_cols=260 Identities=27% Similarity=0.436 Sum_probs=206.8
Q ss_pred CceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccC---hhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCC
Q 007541 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEH---VSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREF 99 (599)
Q Consensus 23 ~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~---~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~ 99 (599)
..|++.+.||+|+||.||+|.+..++..||+|++...... ......+.+|+.+++.++||||+++++++... ..
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~---~~ 78 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDR---AE 78 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcC---CC
Confidence 4689999999999999999999999999999998643221 22345688999999999999999999988542 22
Q ss_pred ccEEEEEecCC-cCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccC
Q 007541 100 KDIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFN 178 (599)
Q Consensus 100 ~~iylV~E~~~-g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~ 178 (599)
..+|+|+||+. ++|.+++...+.+++..++.++.||+.||+|||++||+||||||+||+++.++.+||+|||+++....
T Consensus 79 ~~~~l~~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~ 158 (266)
T cd06651 79 KTLTIFMEYMPGGSVKDQLKAYGALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQT 158 (266)
T ss_pred CEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCCCcccccc
Confidence 47899999998 58999998877899999999999999999999999999999999999999999999999999976432
Q ss_pred CCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHH
Q 007541 179 DTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARV 258 (599)
Q Consensus 179 ~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~ 258 (599)
............++..|+|||.+.+ ..++.++||||+||++++|++|+.||........+..+. ..+
T Consensus 159 ~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~~~~~~---~~~-------- 225 (266)
T cd06651 159 ICMSGTGIRSVTGTPYWMSPEVISG--EGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFKIA---TQP-------- 225 (266)
T ss_pred ccccCCccccCCccccccCHHHhCC--CCCCchhhhHHHHHHHHHHHHCCCCccccchHHHHHHHh---cCC--------
Confidence 2111111223457889999999876 678999999999999999999999997543222111110 000
Q ss_pred hhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHh
Q 007541 259 CLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERM 338 (599)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~m 338 (599)
. ........++.+.+|| +|
T Consensus 226 ---------------------------------------------------------~---~~~~~~~~~~~~~~li-~~ 244 (266)
T cd06651 226 ---------------------------------------------------------T---NPQLPSHISEHARDFL-GC 244 (266)
T ss_pred ---------------------------------------------------------C---CCCCchhcCHHHHHHH-HH
Confidence 0 0011123567788898 67
Q ss_pred cccCCCCCCCHHHHhcCcccc
Q 007541 339 LAFEPKDRPTAEEALADPYFK 359 (599)
Q Consensus 339 L~~DP~~RpTa~e~L~HP~f~ 359 (599)
|..||++|||++|+|+||||+
T Consensus 245 ~~~~p~~Rp~~~eil~hp~~~ 265 (266)
T cd06651 245 IFVEARHRPSAEELLRHPFAQ 265 (266)
T ss_pred hcCChhhCcCHHHHhcCcccc
Confidence 778999999999999999996
No 173
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=4.9e-41 Score=353.78 Aligned_cols=254 Identities=26% Similarity=0.455 Sum_probs=198.8
Q ss_pred CCceEEEEEEeecCceEEEEEEE-----CCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhc-CCCCccccceeecCCC
Q 007541 22 GSRYKIEEVIGKGSYGVVCSAYD-----TRTGEKVAIKKINDIFEHVSDATRILREIKLLRLL-RHPDIVEIKHILLPPS 95 (599)
Q Consensus 22 ~~rY~i~~~LG~G~~g~V~~a~d-----~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l-~HpnIv~l~~v~~~~s 95 (599)
.++|++.++||+|+||.||+|.+ ..+++.||||++.... .......+.+|+.+|+.+ +||||+++++++...
T Consensus 6 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~- 83 (338)
T cd05102 6 RDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGA-TASEHKALMSELKILIHIGNHLNVVNLLGACTKP- 83 (338)
T ss_pred hhHceeeeEeccCCcceEEEEEEeccCCcccchhhheecccccc-chHHHHHHHHHHHHHHHhccCcceeeEEeEecCC-
Confidence 47899999999999999999975 2446789999987432 223456788999999999 799999999988533
Q ss_pred cCCCccEEEEEecCC-cCHHHHHHhC------------------------------------------------------
Q 007541 96 RREFKDIYVVFELME-SDLHQVIKAN------------------------------------------------------ 120 (599)
Q Consensus 96 ~~~~~~iylV~E~~~-g~L~~~i~~~------------------------------------------------------ 120 (599)
...+|+||||++ |+|.+++...
T Consensus 84 ---~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (338)
T cd05102 84 ---NGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPP 160 (338)
T ss_pred ---CCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccc
Confidence 246899999999 6999998753
Q ss_pred --------CCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCCCCCcccccccccC
Q 007541 121 --------DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVAT 192 (599)
Q Consensus 121 --------~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~~~~~~~t~~~gt 192 (599)
..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++....... ........++
T Consensus 161 ~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~-~~~~~~~~~~ 239 (338)
T cd05102 161 QETDDLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPD-YVRKGSARLP 239 (338)
T ss_pred hhccccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcCCCcEEEeecccccccccCcc-hhcccCCCCC
Confidence 2377888999999999999999999999999999999999999999999999986532211 1111233456
Q ss_pred ccccCccccccccCCCCcchhhHhHHHHHHHHHh-CCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHhhhhhhhhcCCCC
Q 007541 193 RWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVCLLLNIIWCGYDG 271 (599)
Q Consensus 193 ~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLlt-G~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~~~~~~~~~~~~~ 271 (599)
..|+|||++.+ ..++.++|||||||++|||++ |..||.+......+.....
T Consensus 240 ~~y~aPE~~~~--~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~-------------------------- 291 (338)
T cd05102 240 LKWMAPESIFD--KVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLK-------------------------- 291 (338)
T ss_pred ccccCcHHhhc--CCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHh--------------------------
Confidence 78999999876 678999999999999999997 9999987543221111100
Q ss_pred CcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHH
Q 007541 272 FMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEE 351 (599)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL~~DP~~RpTa~e 351 (599)
.... .......++.+.+||.+||+.||.+|||+.|
T Consensus 292 ------------------------------------------~~~~---~~~~~~~~~~l~~li~~cl~~dp~~RPs~~e 326 (338)
T cd05102 292 ------------------------------------------DGTR---MRAPENATPEIYRIMLACWQGDPKERPTFSA 326 (338)
T ss_pred ------------------------------------------cCCC---CCCCCCCCHHHHHHHHHHccCChhhCcCHHH
Confidence 0000 0011346788999999999999999999999
Q ss_pred Hhc
Q 007541 352 ALA 354 (599)
Q Consensus 352 ~L~ 354 (599)
+++
T Consensus 327 l~~ 329 (338)
T cd05102 327 LVE 329 (338)
T ss_pred HHH
Confidence 986
No 174
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=2.3e-40 Score=332.79 Aligned_cols=253 Identities=27% Similarity=0.435 Sum_probs=210.8
Q ss_pred ceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEE
Q 007541 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIY 103 (599)
Q Consensus 24 rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~iy 103 (599)
.|.+.+.||+|++|.||+|.+..+++.|++|.+............+.+|+.+++.++||||+++++.+... ..+|
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~~ 75 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDK-----GKLN 75 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccC-----CEEE
Confidence 48899999999999999999999999999999875444445667788999999999999999999998543 4799
Q ss_pred EEEecCC-cCHHHHHHhC--CCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCCC
Q 007541 104 VVFELME-SDLHQVIKAN--DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT 180 (599)
Q Consensus 104 lV~E~~~-g~L~~~i~~~--~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~ 180 (599)
+||||+. ++|.+++... ..+++..+..++.||+.||.|||+.||+|+||||+||+++.++.+||+|||+++......
T Consensus 76 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~ 155 (256)
T cd08529 76 IVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNT 155 (256)
T ss_pred EEEEeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEeCCCCEEEcccccceeccCcc
Confidence 9999997 5999999774 578999999999999999999999999999999999999999999999999998654322
Q ss_pred CCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHhh
Q 007541 181 PTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVCL 260 (599)
Q Consensus 181 ~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~~ 260 (599)
. ......++.+|+|||++.. ..++.++|||||||++++|++|+.||...+.......+...
T Consensus 156 ~---~~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~-------------- 216 (256)
T cd08529 156 N---FANTIVGTPYYLSPELCED--KPYNEKSDVWALGVVLYECCTGKHPFDANNQGALILKIIRG-------------- 216 (256)
T ss_pred c---hhhccccCccccCHHHhcC--CCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcC--------------
Confidence 1 1234568899999999876 57889999999999999999999999876644333222110
Q ss_pred hhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHhcc
Q 007541 261 LLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLA 340 (599)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL~ 340 (599)
.+.......+..+.++|.+||+
T Consensus 217 ----------------------------------------------------------~~~~~~~~~~~~~~~~i~~~l~ 238 (256)
T cd08529 217 ----------------------------------------------------------VFPPVSQMYSQQLAQLIDQCLT 238 (256)
T ss_pred ----------------------------------------------------------CCCCCccccCHHHHHHHHHHcc
Confidence 0011112456789999999999
Q ss_pred cCCCCCCCHHHHhcCccc
Q 007541 341 FEPKDRPTAEEALADPYF 358 (599)
Q Consensus 341 ~DP~~RpTa~e~L~HP~f 358 (599)
.||++||++.++|+|||+
T Consensus 239 ~~p~~Rp~~~~ll~~~~~ 256 (256)
T cd08529 239 KDYRQRPDTFQLLRNPSL 256 (256)
T ss_pred CCcccCcCHHHHhhCCCC
Confidence 999999999999999995
No 175
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=1.9e-40 Score=345.56 Aligned_cols=262 Identities=25% Similarity=0.431 Sum_probs=213.8
Q ss_pred CceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccC-hhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCcc
Q 007541 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEH-VSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKD 101 (599)
Q Consensus 23 ~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~-~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~ 101 (599)
++|++.+.||+|++|+||+|.+..+++.||||.+...... ......+.+|+.+|+.++|+||+++++.+. +...
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~ 75 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQ-----TETY 75 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeee-----cCCE
Confidence 4799999999999999999999999999999999754322 235567889999999999999999999984 3457
Q ss_pred EEEEEecCC-cCHHHHHHhC--CCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccC
Q 007541 102 IYVVFELME-SDLHQVIKAN--DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFN 178 (599)
Q Consensus 102 iylV~E~~~-g~L~~~i~~~--~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~ 178 (599)
+|+||||+. ++|.+++... ..+++..++.++.||+.||.|||+.||+|+||||+|||++.++.++|+|||++.....
T Consensus 76 ~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~ 155 (316)
T cd05574 76 LCLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLHESGHIMLSDFDLSKQSDV 155 (316)
T ss_pred EEEEEEecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEEcCCCCEEEeecchhhcccc
Confidence 999999998 5999998754 4789999999999999999999999999999999999999999999999999875432
Q ss_pred CCCCc--------------------------ccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCC
Q 007541 179 DTPTA--------------------------IFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFP 232 (599)
Q Consensus 179 ~~~~~--------------------------~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~ 232 (599)
..... ......+||..|+|||++.+ ..++.++|||||||++|+|++|+.||.
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~--~~~~~~~Di~slG~ll~~l~~g~~pf~ 233 (316)
T cd05574 156 EPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISG--DGHGSAVDWWTLGILLYEMLYGTTPFK 233 (316)
T ss_pred cccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcC--CCCCchHHHHHHHHHHHHHhhCCCCCC
Confidence 21100 01123478899999999876 578899999999999999999999998
Q ss_pred CCChhhHHHHHHHhcCCCCHHHHHHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhc
Q 007541 233 GKNVVHQLDIMTDLLGTPSPEAIARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSM 312 (599)
Q Consensus 233 g~~~~~~l~~I~~~lG~p~~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (599)
+.+....+..+...
T Consensus 234 ~~~~~~~~~~~~~~------------------------------------------------------------------ 247 (316)
T cd05574 234 GSNRDETFSNILKK------------------------------------------------------------------ 247 (316)
T ss_pred CCchHHHHHHHhcC------------------------------------------------------------------
Confidence 77654433322210
Q ss_pred ccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCC----HHHHhcCccccCcc
Q 007541 313 RKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPT----AEEALADPYFKGLA 362 (599)
Q Consensus 313 ~~~~~~~~~~~~~~~s~~a~dLL~~mL~~DP~~RpT----a~e~L~HP~f~~~~ 362 (599)
...+. .....++.+.+||++||..||++||| ++|+|+||||++..
T Consensus 248 ----~~~~~-~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~~~~~~~~ 296 (316)
T cd05574 248 ----EVTFP-GSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQHPFFRGVN 296 (316)
T ss_pred ----CccCC-CccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcCchhhcCC
Confidence 00000 11226788999999999999999999 99999999999854
No 176
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=3.6e-41 Score=374.17 Aligned_cols=287 Identities=24% Similarity=0.298 Sum_probs=206.0
Q ss_pred CCceEEEEEEeecCceEEEEEEECCCC-cEEEEEEe--------------cC-cccChhhHHHHHHHHHHHHhcCCCCcc
Q 007541 22 GSRYKIEEVIGKGSYGVVCSAYDTRTG-EKVAIKKI--------------ND-IFEHVSDATRILREIKLLRLLRHPDIV 85 (599)
Q Consensus 22 ~~rY~i~~~LG~G~~g~V~~a~d~~tg-~~vAIK~i--------------~~-~~~~~~~~~~i~rEi~iL~~l~HpnIv 85 (599)
.++|++++.||+|+||+||+|..+... ..+++|.+ .+ ..........+.+|+.+|+.++|+||+
T Consensus 147 ~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnIv 226 (501)
T PHA03210 147 LAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENIL 226 (501)
T ss_pred hhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCcC
Confidence 368999999999999999999765432 22222211 11 111222345678999999999999999
Q ss_pred ccceeecCCCcCCCccEEEEEecCCcCHHHHHHhCC-----CCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeC
Q 007541 86 EIKHILLPPSRREFKDIYVVFELMESDLHQVIKAND-----DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILAN 160 (599)
Q Consensus 86 ~l~~v~~~~s~~~~~~iylV~E~~~g~L~~~i~~~~-----~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~ 160 (599)
++++++.. ....|+|+|++.++|..++.... ......++.++.||+.||.|||++||+||||||+|||++
T Consensus 227 ~l~~~~~~-----~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLKP~NILl~ 301 (501)
T PHA03210 227 KIEEILRS-----EANTYMITQKYDFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIFLN 301 (501)
T ss_pred cEeEEEEE-----CCeeEEEEeccccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEC
Confidence 99999843 34689999999999998876432 344677889999999999999999999999999999999
Q ss_pred CCCceeeeccCccccccCCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCC-CC--CChh
Q 007541 161 ADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLF-PG--KNVV 237 (599)
Q Consensus 161 ~~~~lKL~DFGlA~~~~~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF-~g--~~~~ 237 (599)
.++.+||+|||+++....... ......+||..|+|||++.+ ..|+.++|||||||++|||++|..++ .+ .+..
T Consensus 302 ~~~~vkL~DFGla~~~~~~~~--~~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~ 377 (501)
T PHA03210 302 CDGKIVLGDFGTAMPFEKERE--AFDYGWVGTVATNSPEILAG--DGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPG 377 (501)
T ss_pred CCCCEEEEeCCCceecCcccc--cccccccCCcCCCCchhhcC--CCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHH
Confidence 999999999999986543221 11234679999999999977 67999999999999999999987543 32 2345
Q ss_pred hHHHHHHHhcCCCCHHHHHHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhccc-CC
Q 007541 238 HQLDIMTDLLGTPSPEAIARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRK-KK 316 (599)
Q Consensus 238 ~~l~~I~~~lG~p~~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 316 (599)
.++.++...++.+..+.....+ ...+++..... ..
T Consensus 378 ~~~~~~~~~~~~~~~~~p~~~~--------------------------------------------~~~~~i~~~~~~~~ 413 (501)
T PHA03210 378 KQLLKIIDSLSVCDEEFPDPPC--------------------------------------------KLFDYIDSAEIDHA 413 (501)
T ss_pred HHHHHHHHhcccChhhcCCcHH--------------------------------------------HHHHHhhhhhcccC
Confidence 6666666666544332111000 01111111000 00
Q ss_pred CCCCCCCC--CCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccccCc
Q 007541 317 PIPFSQKF--PNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGL 361 (599)
Q Consensus 317 ~~~~~~~~--~~~s~~a~dLL~~mL~~DP~~RpTa~e~L~HP~f~~~ 361 (599)
+..+...+ ...+..+.+||.+||++||.+|||+.|+|+||||...
T Consensus 414 ~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~hp~f~~~ 460 (501)
T PHA03210 414 GHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLALPLFSAE 460 (501)
T ss_pred ccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhChhhhcC
Confidence 00111111 1356678999999999999999999999999999764
No 177
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=9.9e-41 Score=357.16 Aligned_cols=262 Identities=27% Similarity=0.459 Sum_probs=226.1
Q ss_pred CCCCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCC
Q 007541 20 GEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREF 99 (599)
Q Consensus 20 ~~~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~ 99 (599)
-..+-|.+.+.||+|.|++|.+|++..|+..||||+|.+...+......+.||+++|+.|+|||||+++.++...
T Consensus 53 ~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~----- 127 (596)
T KOG0586|consen 53 NSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETE----- 127 (596)
T ss_pred ccccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeec-----
Confidence 345679999999999999999999999999999999998888888878899999999999999999999999544
Q ss_pred ccEEEEEecCC-cCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccC
Q 007541 100 KDIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFN 178 (599)
Q Consensus 100 ~~iylV~E~~~-g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~ 178 (599)
..+|+||||+. |++++++.+++++.+..++.++.|++.|++|||+++|||||||.+|||++.+..+||+|||++..+..
T Consensus 128 ~~lylV~eya~~ge~~~yl~~~gr~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~ 207 (596)
T KOG0586|consen 128 ATLYLVMEYASGGELFDYLVKHGRMKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILLDENMNIKIADFGFSTFFDY 207 (596)
T ss_pred ceeEEEEEeccCchhHHHHHhcccchhhhhhhhhHHHHHHHHHHhhcceeccccchhhcccccccceeeeccccceeecc
Confidence 47999999988 79999999999999999999999999999999999999999999999999999999999999987643
Q ss_pred CCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHH
Q 007541 179 DTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARV 258 (599)
Q Consensus 179 ~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~ 258 (599)
. ..+.+.||++.|.|||+..+. ..-++.+|+||+|+++|.|+.|..||.|.+....-...
T Consensus 208 ~----~~lqt~cgsppyAaPEl~~g~-~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rv--------------- 267 (596)
T KOG0586|consen 208 G----LMLQTFCGSPPYAAPELFNGK-KYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPRV--------------- 267 (596)
T ss_pred c----ccccccCCCCCccChHhhcCc-ccCCcceehhhhhhhheeeeecccccCCcccccccchh---------------
Confidence 2 245678999999999999884 45578999999999999999999999997743321110
Q ss_pred hhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHh
Q 007541 259 CLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERM 338 (599)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~m 338 (599)
+..+..++ --++.++.+||++|
T Consensus 268 -----------------------------------------------------l~gk~rIp-----~~ms~dce~lLrk~ 289 (596)
T KOG0586|consen 268 -----------------------------------------------------LRGKYRIP-----FYMSCDCEDLLRKF 289 (596)
T ss_pred -----------------------------------------------------eeeeeccc-----ceeechhHHHHHHh
Confidence 00011111 12566789999999
Q ss_pred cccCCCCCCCHHHHhcCccccCcccC
Q 007541 339 LAFEPKDRPTAEEALADPYFKGLAKV 364 (599)
Q Consensus 339 L~~DP~~RpTa~e~L~HP~f~~~~~~ 364 (599)
|..+|.+|++.+++..|.|...+...
T Consensus 290 lvl~Pskr~~~dqim~~~W~n~~~~~ 315 (596)
T KOG0586|consen 290 LVLNPSKRGPCDQIMKDRWRNDLLEA 315 (596)
T ss_pred hccCccccCCHHHhhhhcccchhhhh
Confidence 99999999999999999999876543
No 178
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1.2e-40 Score=341.49 Aligned_cols=261 Identities=24% Similarity=0.428 Sum_probs=209.8
Q ss_pred CceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccE
Q 007541 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDI 102 (599)
Q Consensus 23 ~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~i 102 (599)
++|++++.||+|+||+||+|.+..+|+.||+|.+.... .......+.+|+.+|+.++|+||+++++.+.. ...+
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-----~~~~ 74 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLEL-DESKFNQIIMELDILHKAVSPYIVDFYGAFFI-----EGAV 74 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeeccc-CHHHHHHHHHHHHHHHhcCCCcHHhhhhheec-----CCeE
Confidence 47899999999999999999999999999999986432 22334678899999999999999999998854 3579
Q ss_pred EEEEecCCc-CHHHHHHhC---CCCCHHHHHHHHHHHHhhhhhccc-CceEeecCCCCcEEeCCCCceeeeccCcccccc
Q 007541 103 YVVFELMES-DLHQVIKAN---DDLTPEHYQFFLYQLLRGLKYIHT-ANVFHRDLKPKNILANADCKLKICDFGLARVAF 177 (599)
Q Consensus 103 ylV~E~~~g-~L~~~i~~~---~~lse~~i~~i~~QLl~aL~yLHs-~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~ 177 (599)
|+||||+.+ +|.+++... ..+++..++.++.||+.||.|||+ .||+|+||||+|||++.++.+||+|||++....
T Consensus 75 ~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~ 154 (286)
T cd06622 75 YMCMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLV 154 (286)
T ss_pred EEEEeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECCCCCEEEeecCCccccc
Confidence 999999995 898888763 378999999999999999999996 599999999999999999999999999997543
Q ss_pred CCCCCcccccccccCccccCccccccc----cCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHH
Q 007541 178 NDTPTAIFWTDYVATRWYRAPELCGSF----FSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPE 253 (599)
Q Consensus 178 ~~~~~~~~~t~~~gt~~Y~APE~l~~~----~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e 253 (599)
... .....++..|+|||.+.+. ...++.++||||+||++++|++|+.||...........+.....
T Consensus 155 ~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~----- 224 (286)
T cd06622 155 ASL-----AKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAIVD----- 224 (286)
T ss_pred CCc-----cccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHHHHHHhh-----
Confidence 221 1234678889999987542 12468899999999999999999999976543222222111110
Q ss_pred HHHHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHH
Q 007541 254 AIARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALR 333 (599)
Q Consensus 254 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~d 333 (599)
. ......+.+++.+.+
T Consensus 225 -------------------------------------------------------------~---~~~~~~~~~~~~~~~ 240 (286)
T cd06622 225 -------------------------------------------------------------G---DPPTLPSGYSDDAQD 240 (286)
T ss_pred -------------------------------------------------------------c---CCCCCCcccCHHHHH
Confidence 0 011223457888999
Q ss_pred HHHHhcccCCCCCCCHHHHhcCccccCccc
Q 007541 334 LLERMLAFEPKDRPTAEEALADPYFKGLAK 363 (599)
Q Consensus 334 LL~~mL~~DP~~RpTa~e~L~HP~f~~~~~ 363 (599)
||.+||..||.+||+++++++||||.....
T Consensus 241 li~~~l~~~p~~Rp~~~~l~~~~~~~~~~~ 270 (286)
T cd06622 241 FVAKCLNKIPNRRPTYAQLLEHPWLVKYKN 270 (286)
T ss_pred HHHHHcccCcccCCCHHHHhcChhhhhccC
Confidence 999999999999999999999999987654
No 179
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=8.9e-41 Score=339.45 Aligned_cols=261 Identities=23% Similarity=0.408 Sum_probs=207.7
Q ss_pred CCCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhc-CCCCccccceeecCCCcC-C
Q 007541 21 EGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLL-RHPDIVEIKHILLPPSRR-E 98 (599)
Q Consensus 21 ~~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l-~HpnIv~l~~v~~~~s~~-~ 98 (599)
..++|++.+.||+|+||.||+|.+..+++.||+|++.... .....+.+|+.+++.+ +|+||+++++++...... .
T Consensus 4 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~---~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~ 80 (272)
T cd06637 4 PAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG---DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGM 80 (272)
T ss_pred hhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC---ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCC
Confidence 4578999999999999999999999999999999986432 2345677899999998 699999999998654322 2
Q ss_pred CccEEEEEecCC-cCHHHHHHhC--CCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCcccc
Q 007541 99 FKDIYVVFELME-SDLHQVIKAN--DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARV 175 (599)
Q Consensus 99 ~~~iylV~E~~~-g~L~~~i~~~--~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~ 175 (599)
...+|+||||+. ++|.+++... ..+++..++.++.||+.||+|||++||+|+||||+||+++.++.+||+|||+++.
T Consensus 81 ~~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili~~~~~~~l~Dfg~~~~ 160 (272)
T cd06637 81 DDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQ 160 (272)
T ss_pred CcEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEECCCCCEEEccCCCcee
Confidence 346899999998 5999998864 3689999999999999999999999999999999999999999999999999976
Q ss_pred ccCCCCCcccccccccCccccCccccccc---cCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCH
Q 007541 176 AFNDTPTAIFWTDYVATRWYRAPELCGSF---FSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSP 252 (599)
Q Consensus 176 ~~~~~~~~~~~t~~~gt~~Y~APE~l~~~---~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~ 252 (599)
...... ......++..|+|||++.+. ...|+.++||||+||++++|++|..||...........+..
T Consensus 161 ~~~~~~---~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~~~~------- 230 (272)
T cd06637 161 LDRTVG---RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPR------- 230 (272)
T ss_pred cccccc---cCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhc-------
Confidence 432211 12345788999999987531 14588899999999999999999999965432221111000
Q ss_pred HHHHHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHH
Q 007541 253 EAIARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLAL 332 (599)
Q Consensus 253 e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~ 332 (599)
... ........+..+.
T Consensus 231 --------------------------------------------------------------~~~--~~~~~~~~~~~~~ 246 (272)
T cd06637 231 --------------------------------------------------------------NPA--PRLKSKKWSKKFQ 246 (272)
T ss_pred --------------------------------------------------------------CCC--CCCCCCCcCHHHH
Confidence 000 0001124677899
Q ss_pred HHHHHhcccCCCCCCCHHHHhcCccc
Q 007541 333 RLLERMLAFEPKDRPTAEEALADPYF 358 (599)
Q Consensus 333 dLL~~mL~~DP~~RpTa~e~L~HP~f 358 (599)
+||.+||..||.+|||+.|+|.||||
T Consensus 247 ~li~~~l~~~p~~Rpt~~~il~~~~~ 272 (272)
T cd06637 247 SFIESCLVKNHSQRPTTEQLMKHPFI 272 (272)
T ss_pred HHHHHHcCCChhhCCCHHHHhhCCCC
Confidence 99999999999999999999999998
No 180
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=2.8e-40 Score=340.49 Aligned_cols=264 Identities=23% Similarity=0.389 Sum_probs=211.6
Q ss_pred cCCCCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCC
Q 007541 19 YGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRRE 98 (599)
Q Consensus 19 ~~~~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~ 98 (599)
+..++.|++++.||+|+||.||+|.+..+++.||+|.+... .......+.+|+.+++.++|+||+++++++...
T Consensus 8 ~~~~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~---- 81 (292)
T cd06644 8 LDPNEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETK--SEEELEDYMVEIEILATCNHPYIVKLLGAFYWD---- 81 (292)
T ss_pred cCcchhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccC--CHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeC----
Confidence 35668999999999999999999999999999999998642 334456788999999999999999999998543
Q ss_pred CccEEEEEecCCc-CHHHHHHh-CCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccc
Q 007541 99 FKDIYVVFELMES-DLHQVIKA-NDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVA 176 (599)
Q Consensus 99 ~~~iylV~E~~~g-~L~~~i~~-~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~ 176 (599)
..+|+||||+++ +|..++.. ...+++..+..++.||+.+|.|||+.||+||||||+|||++.++.+||+|||++...
T Consensus 82 -~~~~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~ 160 (292)
T cd06644 82 -GKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLTLDGDIKLADFGVSAKN 160 (292)
T ss_pred -CeEEEEEecCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEEcCCCCEEEccCccceec
Confidence 479999999995 77777654 457899999999999999999999999999999999999999999999999998754
Q ss_pred cCCCCCcccccccccCccccCccccccc---cCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHH
Q 007541 177 FNDTPTAIFWTDYVATRWYRAPELCGSF---FSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPE 253 (599)
Q Consensus 177 ~~~~~~~~~~t~~~gt~~Y~APE~l~~~---~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e 253 (599)
..... ......++..|+|||++... ...++.++|||||||++|+|++|.+||...+....+..+.. ..
T Consensus 161 ~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~---~~--- 231 (292)
T cd06644 161 VKTLQ---RRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAK---SE--- 231 (292)
T ss_pred ccccc---ccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHHHHHHhc---CC---
Confidence 22111 12345678899999987421 14578899999999999999999999976553322222110 00
Q ss_pred HHHHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHH
Q 007541 254 AIARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALR 333 (599)
Q Consensus 254 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~d 333 (599)
.+........+..+.+
T Consensus 232 ----------------------------------------------------------------~~~~~~~~~~~~~~~~ 247 (292)
T cd06644 232 ----------------------------------------------------------------PPTLSQPSKWSMEFRD 247 (292)
T ss_pred ----------------------------------------------------------------CccCCCCcccCHHHHH
Confidence 0000112345678999
Q ss_pred HHHHhcccCCCCCCCHHHHhcCccccCcc
Q 007541 334 LLERMLAFEPKDRPTAEEALADPYFKGLA 362 (599)
Q Consensus 334 LL~~mL~~DP~~RpTa~e~L~HP~f~~~~ 362 (599)
||.+||..||.+||+++|+|+||||..+.
T Consensus 248 li~~~l~~~p~~Rp~~~~il~~~~~~~~~ 276 (292)
T cd06644 248 FLKTALDKHPETRPSAAQLLEHPFVSSVT 276 (292)
T ss_pred HHHHHhcCCcccCcCHHHHhcCccccccc
Confidence 99999999999999999999999998764
No 181
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.7e-42 Score=342.03 Aligned_cols=256 Identities=25% Similarity=0.421 Sum_probs=220.6
Q ss_pred CceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCccc-ChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCcc
Q 007541 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFE-HVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKD 101 (599)
Q Consensus 23 ~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~-~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~ 101 (599)
+.|..+++||+|.||.|.+|+.+.||+.+|||++++..- ........+.|-++|+..+||.+..|+-.|.. ...
T Consensus 168 ~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt-----~dr 242 (516)
T KOG0690|consen 168 EDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQT-----QDR 242 (516)
T ss_pred chhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhcc-----Cce
Confidence 567889999999999999999999999999999986443 33445677889999999999999999988843 357
Q ss_pred EEEEEecCC-cCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCCC
Q 007541 102 IYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT 180 (599)
Q Consensus 102 iylV~E~~~-g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~ 180 (599)
+|+||||+. |.|+-.+.....++++.++++...|+.||.|||+++||.||||.+|+|+|.||++||+||||++..-.
T Consensus 243 lCFVMeyanGGeLf~HLsrer~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I~-- 320 (516)
T KOG0690|consen 243 LCFVMEYANGGELFFHLSRERVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLLDKDGHIKITDFGLCKEEIK-- 320 (516)
T ss_pred EEEEEEEccCceEeeehhhhhcccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhheeccCCceEeeecccchhccc--
Confidence 999999999 58988888888899999999999999999999999999999999999999999999999999975322
Q ss_pred CCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHhh
Q 007541 181 PTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVCL 260 (599)
Q Consensus 181 ~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~~ 260 (599)
........|||+.|.|||++.. ..|+.++|.|.+|+++|||+||+.||..++....+..|...-
T Consensus 321 -~g~t~kTFCGTPEYLAPEVleD--nDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLIl~ed------------- 384 (516)
T KOG0690|consen 321 -YGDTTKTFCGTPEYLAPEVLED--NDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELILMED------------- 384 (516)
T ss_pred -ccceeccccCChhhcCchhhcc--ccccceeehhhhhHHHHHHHhccCcccccchhHHHHHHHhhh-------------
Confidence 2222457899999999999988 789999999999999999999999999988777666664200
Q ss_pred hhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHhcc
Q 007541 261 LLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLA 340 (599)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL~ 340 (599)
+ .....++++|+.||..+|.
T Consensus 385 ---------------------------------------~---------------------kFPr~ls~eAktLLsGLL~ 404 (516)
T KOG0690|consen 385 ---------------------------------------L---------------------KFPRTLSPEAKTLLSGLLK 404 (516)
T ss_pred ---------------------------------------c---------------------cCCccCCHHHHHHHHHHhh
Confidence 0 0112478999999999999
Q ss_pred cCCCCCCC-----HHHHhcCccccCc
Q 007541 341 FEPKDRPT-----AEEALADPYFKGL 361 (599)
Q Consensus 341 ~DP~~RpT-----a~e~L~HP~f~~~ 361 (599)
.||++|.. |.|+.+|+||.++
T Consensus 405 kdP~kRLGgGpdDakEi~~h~FF~~v 430 (516)
T KOG0690|consen 405 KDPKKRLGGGPDDAKEIMRHRFFASV 430 (516)
T ss_pred cChHhhcCCCchhHHHHHhhhhhccC
Confidence 99999974 8999999999976
No 182
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=2.1e-40 Score=335.80 Aligned_cols=256 Identities=27% Similarity=0.483 Sum_probs=208.3
Q ss_pred ceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccCh-------hhHHHHHHHHHHHHhcCCCCccccceeecCCCc
Q 007541 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHV-------SDATRILREIKLLRLLRHPDIVEIKHILLPPSR 96 (599)
Q Consensus 24 rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~-------~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~ 96 (599)
+|.+...||+|++|.||+|.+..+++.||+|.+....... .....+.+|+.+++.++||||+++++++..
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--- 77 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLD--- 77 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEe---
Confidence 5888999999999999999999999999999886432221 123567899999999999999999998843
Q ss_pred CCCccEEEEEecCC-cCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCcccc
Q 007541 97 REFKDIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARV 175 (599)
Q Consensus 97 ~~~~~iylV~E~~~-g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~ 175 (599)
....++||||+. ++|.+++...+.+++..++.++.||+.||.|||+.|++||||+|+|||++.++.+||+|||+++.
T Consensus 78 --~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~~~~~~~~l~dfg~~~~ 155 (267)
T cd06628 78 --ADHLNIFLEYVPGGSVAALLNNYGAFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVDNKGGIKISDFGISKK 155 (267)
T ss_pred --CCccEEEEEecCCCCHHHHHHhccCccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEEcCCCCEEecccCCCcc
Confidence 347899999998 59999998888899999999999999999999999999999999999999999999999999987
Q ss_pred ccCCCCCc---ccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCH
Q 007541 176 AFNDTPTA---IFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSP 252 (599)
Q Consensus 176 ~~~~~~~~---~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~ 252 (599)
........ .......++..|+|||.+.+ ..++.++|+||+||++++|++|+.||.+.+....+..+...
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~--~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~------ 227 (267)
T cd06628 156 LEANSLSTKTNGARPSLQGSVFWMAPEVVKQ--TSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAIFKIGEN------ 227 (267)
T ss_pred cccccccCCccccccccCCCcCccChhHhcc--CCCCchhhhHHHHHHHHHHhhCCCCCCCccHHHHHHHHhcc------
Confidence 64221111 11123467889999999876 57889999999999999999999999875433222111100
Q ss_pred HHHHHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHH
Q 007541 253 EAIARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLAL 332 (599)
Q Consensus 253 e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~ 332 (599)
.........+..+.
T Consensus 228 ------------------------------------------------------------------~~~~~~~~~~~~~~ 241 (267)
T cd06628 228 ------------------------------------------------------------------ASPEIPSNISSEAI 241 (267)
T ss_pred ------------------------------------------------------------------CCCcCCcccCHHHH
Confidence 00111234678899
Q ss_pred HHHHHhcccCCCCCCCHHHHhcCccc
Q 007541 333 RLLERMLAFEPKDRPTAEEALADPYF 358 (599)
Q Consensus 333 dLL~~mL~~DP~~RpTa~e~L~HP~f 358 (599)
+||++||+.||.+|||+.|+|+||||
T Consensus 242 ~li~~~l~~~p~~Rp~~~~il~~~~~ 267 (267)
T cd06628 242 DFLEKTFEIDHNKRPTAAELLKHPFL 267 (267)
T ss_pred HHHHHHccCCchhCcCHHHHhhCCCC
Confidence 99999999999999999999999998
No 183
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.5e-41 Score=357.62 Aligned_cols=263 Identities=28% Similarity=0.432 Sum_probs=207.4
Q ss_pred CCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcC-CCCccccceeecCCCcCCCc
Q 007541 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLR-HPDIVEIKHILLPPSRREFK 100 (599)
Q Consensus 22 ~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~-HpnIv~l~~v~~~~s~~~~~ 100 (599)
+..|+++++||+|+.+.||++... ....||+|++.........+..+..||.+|.+|+ |.+||+|+++=+.+ +
T Consensus 360 g~~Yeilk~iG~GGSSkV~kV~~s-~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d-----~ 433 (677)
T KOG0596|consen 360 GREYEILKQIGSGGSSKVFKVLNS-DKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTD-----G 433 (677)
T ss_pred cchhhHHHhhcCCCcceeeeeecC-CCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccC-----c
Confidence 578999999999999999999753 3466788877765556677888999999999997 99999999987553 4
Q ss_pred cEEEEEecCCcCHHHHHHhCCCC-CHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCC
Q 007541 101 DIYVVFELMESDLHQVIKANDDL-TPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFND 179 (599)
Q Consensus 101 ~iylV~E~~~g~L~~~i~~~~~l-se~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~ 179 (599)
.+||||||-+.||..+|+..... ..-.++.|.+|+|.|++++|.+||||.||||.|+|+- .|.+||+|||.|.....+
T Consensus 434 ~lYmvmE~Gd~DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLlV-kG~LKLIDFGIA~aI~~D 512 (677)
T KOG0596|consen 434 YLYMVMECGDIDLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLLV-KGRLKLIDFGIANAIQPD 512 (677)
T ss_pred eEEEEeecccccHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEEE-eeeEEeeeechhcccCcc
Confidence 79999999999999999887543 3358999999999999999999999999999999875 789999999999987655
Q ss_pred CCCcccccccccCccccCccccccccC---------CCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCC
Q 007541 180 TPTAIFWTDYVATRWYRAPELCGSFFS---------KYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTP 250 (599)
Q Consensus 180 ~~~~~~~t~~~gt~~Y~APE~l~~~~~---------~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p 250 (599)
+. .+.-...+||..||+||.+..... +.+.++||||||||||+|+.|++||..- ..++.++..+..
T Consensus 513 TT-sI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~--~n~~aKl~aI~~-- 587 (677)
T KOG0596|consen 513 TT-SIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQI--INQIAKLHAITD-- 587 (677)
T ss_pred cc-ceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHH--HHHHHHHHhhcC--
Confidence 43 344556799999999998754211 2677999999999999999999999531 112222211110
Q ss_pred CHHHHHHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHH
Q 007541 251 SPEAIARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPL 330 (599)
Q Consensus 251 ~~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 330 (599)
....+.|.++-++ .+
T Consensus 588 ---------------------------------------------------------------P~~~Iefp~~~~~--~~ 602 (677)
T KOG0596|consen 588 ---------------------------------------------------------------PNHEIEFPDIPEN--DE 602 (677)
T ss_pred ---------------------------------------------------------------CCccccccCCCCc--hH
Confidence 0111222222111 23
Q ss_pred HHHHHHHhcccCCCCCCCHHHHhcCccccCc
Q 007541 331 ALRLLERMLAFEPKDRPTAEEALADPYFKGL 361 (599)
Q Consensus 331 a~dLL~~mL~~DP~~RpTa~e~L~HP~f~~~ 361 (599)
++++++.||.+||++|||+.++|+|||++..
T Consensus 603 li~~mK~CL~rdPkkR~si~eLLqhpFl~~~ 633 (677)
T KOG0596|consen 603 LIDVMKCCLARDPKKRWSIPELLQHPFLQIQ 633 (677)
T ss_pred HHHHHHHHHhcCcccCCCcHHHhcCcccccc
Confidence 9999999999999999999999999999864
No 184
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=3.6e-40 Score=334.01 Aligned_cols=257 Identities=25% Similarity=0.424 Sum_probs=207.5
Q ss_pred ceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccC----hhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCC
Q 007541 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEH----VSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREF 99 (599)
Q Consensus 24 rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~----~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~ 99 (599)
+|++.+.||+|+||.||+|.+ .+|+.+|||.+...... ......+.+|+.+|+.++|+||+++++++.. .
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-----~ 74 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLT-NQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLD-----D 74 (265)
T ss_pred CccccceEeccCCeEEEEEEE-cCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeec-----C
Confidence 588999999999999999986 58899999998643211 2234568899999999999999999999843 3
Q ss_pred ccEEEEEecCC-cCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccC
Q 007541 100 KDIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFN 178 (599)
Q Consensus 100 ~~iylV~E~~~-g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~ 178 (599)
..+|+|+||+. ++|.+++...+.+++..++.++.||+.||.|||+.||+|+||+|+||+++.++.+||+|||++.....
T Consensus 75 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~ 154 (265)
T cd06631 75 NTISIFMEFVPGGSISSILNRFGPLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAW 154 (265)
T ss_pred CeEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEECCCCeEEeccchhhHhhhh
Confidence 58999999998 59999998878899999999999999999999999999999999999999999999999999976421
Q ss_pred CC---CCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHH
Q 007541 179 DT---PTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAI 255 (599)
Q Consensus 179 ~~---~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i 255 (599)
.. ..........++..|+|||.+.+ ..++.++|+|||||++++|++|..||...+.......+....+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~pe~~~~--~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~------- 225 (265)
T cd06631 155 VGLHGTHSNMLKSMHGTPYWMAPEVINE--SGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIGAHRG------- 225 (265)
T ss_pred ccccccccccccccCCCccccChhhhcC--CCCcchhhHHHHHHHHHHHHhCCCccccCChHHHHHHhhhccC-------
Confidence 11 11112234568899999999876 6788999999999999999999999976543322211111000
Q ss_pred HHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHH
Q 007541 256 ARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLL 335 (599)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL 335 (599)
.........+..+.+||
T Consensus 226 ---------------------------------------------------------------~~~~~~~~~~~~~~~~i 242 (265)
T cd06631 226 ---------------------------------------------------------------LMPRLPDSFSAAAIDFV 242 (265)
T ss_pred ---------------------------------------------------------------CCCCCCCCCCHHHHHHH
Confidence 01112234678899999
Q ss_pred HHhcccCCCCCCCHHHHhcCccc
Q 007541 336 ERMLAFEPKDRPTAEEALADPYF 358 (599)
Q Consensus 336 ~~mL~~DP~~RpTa~e~L~HP~f 358 (599)
.+||..||.+|||+.|+|+||||
T Consensus 243 ~~~l~~~p~~Rp~~~~~l~~~~~ 265 (265)
T cd06631 243 TSCLTRDQHERPSALQLLRHDFL 265 (265)
T ss_pred HHHhcCCcccCCCHHHHhcCCCC
Confidence 99999999999999999999997
No 185
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=6.5e-40 Score=337.28 Aligned_cols=263 Identities=25% Similarity=0.413 Sum_probs=208.9
Q ss_pred CCCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhc-CCCCccccceeecCCCcCCC
Q 007541 21 EGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLL-RHPDIVEIKHILLPPSRREF 99 (599)
Q Consensus 21 ~~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l-~HpnIv~l~~v~~~~s~~~~ 99 (599)
..++|.+.+.||+|+||.||+|.+..+++.||+|++... ......+.+|+.+++.+ +|||++++++++........
T Consensus 20 ~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~---~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~ 96 (291)
T cd06639 20 PTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPI---SDVDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLVG 96 (291)
T ss_pred CCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEeccc---ccHHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccCC
Confidence 468899999999999999999999999999999998642 12345677899999988 79999999999875433344
Q ss_pred ccEEEEEecCC-cCHHHHHHh----CCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccc
Q 007541 100 KDIYVVFELME-SDLHQVIKA----NDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLAR 174 (599)
Q Consensus 100 ~~iylV~E~~~-g~L~~~i~~----~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~ 174 (599)
..+|+||||++ ++|.+++.. ...+++..++.++.||+.||.|||+.||+||||||+||+++.++.+||+|||++.
T Consensus 97 ~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili~~~~~~kl~dfg~~~ 176 (291)
T cd06639 97 GQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLTTEGGVKLVDFGVSA 176 (291)
T ss_pred CeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEeecccch
Confidence 57999999998 589888753 3578999999999999999999999999999999999999999999999999997
Q ss_pred cccCCCCCcccccccccCccccCcccccccc---CCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCC
Q 007541 175 VAFNDTPTAIFWTDYVATRWYRAPELCGSFF---SKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPS 251 (599)
Q Consensus 175 ~~~~~~~~~~~~t~~~gt~~Y~APE~l~~~~---~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~ 251 (599)
........ .....++..|+|||.+.... ..++.++||||+|||+++|++|++||...+....+..+.. .
T Consensus 177 ~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~~~~~~---~-- 248 (291)
T cd06639 177 QLTSTRLR---RNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFKIPR---N-- 248 (291)
T ss_pred hccccccc---ccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHHHHHHhc---C--
Confidence 65322211 12346888999999875421 2368899999999999999999999976554333222211 0
Q ss_pred HHHHHHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHH
Q 007541 252 PEAIARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLA 331 (599)
Q Consensus 252 ~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a 331 (599)
....+ ......+..+
T Consensus 249 ----------------------------------------------------------------~~~~~-~~~~~~~~~l 263 (291)
T cd06639 249 ----------------------------------------------------------------PPPTL-LHPEKWCRSF 263 (291)
T ss_pred ----------------------------------------------------------------CCCCC-CcccccCHHH
Confidence 00000 0012345678
Q ss_pred HHHHHHhcccCCCCCCCHHHHhcCcccc
Q 007541 332 LRLLERMLAFEPKDRPTAEEALADPYFK 359 (599)
Q Consensus 332 ~dLL~~mL~~DP~~RpTa~e~L~HP~f~ 359 (599)
.+||.+||+.||.+|||+.|+|+||||+
T Consensus 264 ~~li~~~l~~~p~~Rps~~~il~~~~~~ 291 (291)
T cd06639 264 NHFISQCLIKDFEARPSVTHLLEHPFIK 291 (291)
T ss_pred HHHHHHHhhcChhhCcCHHHHhcCcccC
Confidence 9999999999999999999999999995
No 186
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=4.2e-40 Score=340.67 Aligned_cols=260 Identities=28% Similarity=0.467 Sum_probs=212.1
Q ss_pred cCCCCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCC
Q 007541 19 YGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRRE 98 (599)
Q Consensus 19 ~~~~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~ 98 (599)
.+...+|++++.||+|++|.||+|++..+++.||+|++.... ......+.+|+.+++.+.|+||+++++.+..
T Consensus 16 ~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~--~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~----- 88 (296)
T cd06654 16 GDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQ--QPKKELIINEILVMRENKNPNIVNYLDSYLV----- 88 (296)
T ss_pred CCcccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCC--cchHHHHHHHHHHHHhCCCCCEeeEEEEEEe-----
Confidence 455689999999999999999999999999999999986532 2345678899999999999999999999854
Q ss_pred CccEEEEEecCC-cCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCcccccc
Q 007541 99 FKDIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAF 177 (599)
Q Consensus 99 ~~~iylV~E~~~-g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~ 177 (599)
...+|+||||+. ++|.+++... .+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||++....
T Consensus 89 ~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~ 167 (296)
T cd06654 89 GDELWVVMEYLAGGSLTDVVTET-CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQIT 167 (296)
T ss_pred CCEEEEeecccCCCCHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEECccccchhcc
Confidence 347999999998 5899988654 68999999999999999999999999999999999999999999999999987643
Q ss_pred CCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHH
Q 007541 178 NDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIAR 257 (599)
Q Consensus 178 ~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~ 257 (599)
.... ......++..|+|||.+.+ ..++.++||||+||++|+|++|+.||.+.+....+..+.. .+.
T Consensus 168 ~~~~---~~~~~~~~~~y~aPE~~~~--~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~~~~-~~~-------- 233 (296)
T cd06654 168 PEQS---KRSTMVGTPYWMAPEVVTR--KAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIAT-NGT-------- 233 (296)
T ss_pred cccc---ccCcccCCccccCHHHHcC--CCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHHHHhc-CCC--------
Confidence 2211 1233468889999999876 6788999999999999999999999977654322211110 000
Q ss_pred HhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHH
Q 007541 258 VCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLER 337 (599)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~ 337 (599)
+.......+++.+.+||.+
T Consensus 234 -------------------------------------------------------------~~~~~~~~~~~~l~~li~~ 252 (296)
T cd06654 234 -------------------------------------------------------------PELQNPEKLSAIFRDFLNR 252 (296)
T ss_pred -------------------------------------------------------------CCCCCccccCHHHHHHHHH
Confidence 0001123466789999999
Q ss_pred hcccCCCCCCCHHHHhcCccccCc
Q 007541 338 MLAFEPKDRPTAEEALADPYFKGL 361 (599)
Q Consensus 338 mL~~DP~~RpTa~e~L~HP~f~~~ 361 (599)
||..||.+|||+.|+|+||||...
T Consensus 253 ~l~~~p~~Rpt~~eil~~~~~~~~ 276 (296)
T cd06654 253 CLDMDVEKRGSAKELLQHQFLKIA 276 (296)
T ss_pred HCcCCcccCcCHHHHhhChhhhcc
Confidence 999999999999999999999854
No 187
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=6.2e-40 Score=339.60 Aligned_cols=259 Identities=29% Similarity=0.511 Sum_probs=213.1
Q ss_pred CCCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCc
Q 007541 21 EGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFK 100 (599)
Q Consensus 21 ~~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~ 100 (599)
...+|++.+.||.|++|+||+|++..+|+.||||.+... .......+.+|+.+++.++|+||+++++.+.. ..
T Consensus 17 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-----~~ 89 (296)
T cd06655 17 PKKKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQ--KQPKKELIINEILVMKELKNPNIVNFLDSFLV-----GD 89 (296)
T ss_pred CcceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecc--cCchHHHHHHHHHHHHhcCCCceeeeeeeEec-----Cc
Confidence 457899999999999999999999999999999998642 22345678899999999999999999999843 34
Q ss_pred cEEEEEecCC-cCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCC
Q 007541 101 DIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFND 179 (599)
Q Consensus 101 ~iylV~E~~~-g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~ 179 (599)
.+|+|+||+. ++|..++... .+++..+..++.||+.||.|||+.||+|+||||+||+++.++.+||+|||++......
T Consensus 90 ~~~lv~e~~~~~~L~~~~~~~-~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~ 168 (296)
T cd06655 90 ELFVVMEYLAGGSLTDVVTET-CMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPE 168 (296)
T ss_pred eEEEEEEecCCCcHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccchhcccc
Confidence 7999999998 5888888654 6999999999999999999999999999999999999999999999999998764322
Q ss_pred CCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHh
Q 007541 180 TPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVC 259 (599)
Q Consensus 180 ~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~ 259 (599)
... .....++..|+|||.+.+ ..++.++|+|||||++|+|++|+.||.+.+....+..+... +
T Consensus 169 ~~~---~~~~~~~~~y~aPE~~~~--~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~~~~-~----------- 231 (296)
T cd06655 169 QSK---RSTMVGTPYWMAPEVVTR--KAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATN-G----------- 231 (296)
T ss_pred ccc---CCCcCCCccccCcchhcC--CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc-C-----------
Confidence 211 123468889999999876 57889999999999999999999999877654433222110 0
Q ss_pred hhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHhc
Q 007541 260 LLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERML 339 (599)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL 339 (599)
.+........++.+.+||.+||
T Consensus 232 ----------------------------------------------------------~~~~~~~~~~~~~~~~li~~~l 253 (296)
T cd06655 232 ----------------------------------------------------------TPELQNPEKLSPIFRDFLNRCL 253 (296)
T ss_pred ----------------------------------------------------------CcccCCcccCCHHHHHHHHHHh
Confidence 0001112346788999999999
Q ss_pred ccCCCCCCCHHHHhcCccccCcc
Q 007541 340 AFEPKDRPTAEEALADPYFKGLA 362 (599)
Q Consensus 340 ~~DP~~RpTa~e~L~HP~f~~~~ 362 (599)
..||.+|||+.+++.||||+...
T Consensus 254 ~~dp~~Rpt~~~il~~~~~~~~~ 276 (296)
T cd06655 254 EMDVEKRGSAKELLQHPFLKLAK 276 (296)
T ss_pred hcChhhCCCHHHHhhChHhhhcc
Confidence 99999999999999999998654
No 188
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=1e-40 Score=338.42 Aligned_cols=260 Identities=25% Similarity=0.406 Sum_probs=208.0
Q ss_pred CCCCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCC
Q 007541 20 GEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREF 99 (599)
Q Consensus 20 ~~~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~ 99 (599)
...++|++.+.||+|+||.||+|.+..+++.||+|+++.. .......+.+|+.+++.++||||+++++.+.. .
T Consensus 6 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~--~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~-----~ 78 (267)
T cd06645 6 NPQEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLE--PGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLR-----R 78 (267)
T ss_pred CcHHHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecC--chhHHHHHHHHHHHHHhCCCCCeeeEEEEEEe-----C
Confidence 4456899999999999999999999999999999998643 22334567789999999999999999999843 3
Q ss_pred ccEEEEEecCC-cCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccC
Q 007541 100 KDIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFN 178 (599)
Q Consensus 100 ~~iylV~E~~~-g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~ 178 (599)
..+|+||||++ ++|.+++...+.+++..++.++.||+.||.|||+.||+|+||||+|||++.++.+||+|||++.....
T Consensus 79 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd06645 79 DKLWICMEFCGGGSLQDIYHVTGPLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLTDNGHVKLADFGVSAQITA 158 (267)
T ss_pred CEEEEEEeccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECcceeeeEccC
Confidence 57899999998 59999998888999999999999999999999999999999999999999999999999999876532
Q ss_pred CCCCcccccccccCccccCcccccc-ccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHH
Q 007541 179 DTPTAIFWTDYVATRWYRAPELCGS-FFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIAR 257 (599)
Q Consensus 179 ~~~~~~~~t~~~gt~~Y~APE~l~~-~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~ 257 (599)
... ......++..|+|||++.. ....++.++|+||+||++|+|++|..||........+..+..
T Consensus 159 ~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~~~------------ 223 (267)
T cd06645 159 TIA---KRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTK------------ 223 (267)
T ss_pred ccc---ccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhhhc------------
Confidence 211 1234578999999998742 114588999999999999999999999865432221111100
Q ss_pred HhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHH
Q 007541 258 VCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLER 337 (599)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~ 337 (599)
....+..+ .....++..+.+||.+
T Consensus 224 -------------------------------------------------------~~~~~~~~-~~~~~~~~~~~~li~~ 247 (267)
T cd06645 224 -------------------------------------------------------SNFQPPKL-KDKMKWSNSFHHFVKM 247 (267)
T ss_pred -------------------------------------------------------cCCCCCcc-cccCCCCHHHHHHHHH
Confidence 00000000 0112356789999999
Q ss_pred hcccCCCCCCCHHHHhcCcc
Q 007541 338 MLAFEPKDRPTAEEALADPY 357 (599)
Q Consensus 338 mL~~DP~~RpTa~e~L~HP~ 357 (599)
||..||.+|||++++|+|||
T Consensus 248 ~l~~~P~~R~~~~~ll~~~~ 267 (267)
T cd06645 248 ALTKNPKKRPTAEKLLQHPF 267 (267)
T ss_pred HccCCchhCcCHHHHhcCCC
Confidence 99999999999999999998
No 189
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=1.8e-40 Score=336.19 Aligned_cols=261 Identities=25% Similarity=0.451 Sum_probs=208.6
Q ss_pred ceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccCh----hhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCC
Q 007541 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHV----SDATRILREIKLLRLLRHPDIVEIKHILLPPSRREF 99 (599)
Q Consensus 24 rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~----~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~ 99 (599)
+|+..+.||+|+||.||++.+..+++.||+|++....... .....+.+|+.+|+.++|+||+++++++. +.
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-----~~ 75 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATC-----ED 75 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceec-----cC
Confidence 4888999999999999999999999999999987432211 13467889999999999999999999984 33
Q ss_pred ccEEEEEecCC-cCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCC-ceeeeccCcccccc
Q 007541 100 KDIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADC-KLKICDFGLARVAF 177 (599)
Q Consensus 100 ~~iylV~E~~~-g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~-~lKL~DFGlA~~~~ 177 (599)
.++++||||+. ++|.+++...+.+++..+..++.||+.||.|||++|++|+||||+||+++.++ .+||+|||++....
T Consensus 76 ~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~ 155 (268)
T cd06630 76 SHFNLFVEWMAGGSVSHLLSKYGAFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDSTGQRLRIADFGAAARLA 155 (268)
T ss_pred CeEEEEEeccCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEcccccccccc
Confidence 57999999999 58999998878899999999999999999999999999999999999998876 59999999997654
Q ss_pred CCCCCc-ccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHH
Q 007541 178 NDTPTA-IFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIA 256 (599)
Q Consensus 178 ~~~~~~-~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~ 256 (599)
...... .......++..|+|||++.+ ..++.++|+||+||++++|++|..||...+.......+.+..
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~PE~~~~--~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~--------- 224 (268)
T cd06630 156 AKGTGAGEFQGQLLGTIAFMAPEVLRG--EQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIA--------- 224 (268)
T ss_pred cccccCCccccccccccceeCHhHhcc--CCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHHHh---------
Confidence 321111 11123467889999999866 578899999999999999999999997544322222111100
Q ss_pred HHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHH
Q 007541 257 RVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLE 336 (599)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~ 336 (599)
. ...........++.+.++|.
T Consensus 225 ---------------------------------------------------------~--~~~~~~~~~~~~~~~~~~i~ 245 (268)
T cd06630 225 ---------------------------------------------------------S--ATTAPSIPEHLSPGLRDVTL 245 (268)
T ss_pred ---------------------------------------------------------c--cCCCCCCchhhCHHHHHHHH
Confidence 0 00001112346788999999
Q ss_pred HhcccCCCCCCCHHHHhcCcccc
Q 007541 337 RMLAFEPKDRPTAEEALADPYFK 359 (599)
Q Consensus 337 ~mL~~DP~~RpTa~e~L~HP~f~ 359 (599)
+||..||.+|||+.|+|+||||+
T Consensus 246 ~~l~~~p~~R~~~~~ll~~~~~~ 268 (268)
T cd06630 246 RCLELQPEDRPPSRELLKHPVFR 268 (268)
T ss_pred HHcCCCcccCcCHHHHhcCcccC
Confidence 99999999999999999999985
No 190
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=5.9e-40 Score=330.34 Aligned_cols=255 Identities=32% Similarity=0.523 Sum_probs=211.5
Q ss_pred ceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEE
Q 007541 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIY 103 (599)
Q Consensus 24 rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~iy 103 (599)
+|++++.||.|+||.||+|.+..+++.||+|.+...........++.+|+.+|+.++|+||+++++.+... ....+|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~---~~~~~~ 77 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDR---SNQTLY 77 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecC---CCCEEE
Confidence 58999999999999999999999999999999875444455567788999999999999999999987543 234689
Q ss_pred EEEecCC-cCHHHHHHh----CCCCCHHHHHHHHHHHHhhhhhcc-----cCceEeecCCCCcEEeCCCCceeeeccCcc
Q 007541 104 VVFELME-SDLHQVIKA----NDDLTPEHYQFFLYQLLRGLKYIH-----TANVFHRDLKPKNILANADCKLKICDFGLA 173 (599)
Q Consensus 104 lV~E~~~-g~L~~~i~~----~~~lse~~i~~i~~QLl~aL~yLH-----s~gIvHrDLKP~NILv~~~~~lKL~DFGlA 173 (599)
+||||++ ++|.+++.. ...+++..++.++.||+.||.||| +.+|+|+||||+|||++.++.+||+|||++
T Consensus 78 ~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~ 157 (265)
T cd08217 78 IVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLA 157 (265)
T ss_pred EEehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEeccccc
Confidence 9999998 589998875 357899999999999999999999 999999999999999999999999999999
Q ss_pred ccccCCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHH
Q 007541 174 RVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPE 253 (599)
Q Consensus 174 ~~~~~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e 253 (599)
........ ......++..|+|||.+.. ..++.++|+|||||++++|++|+.||.+.+.......+..
T Consensus 158 ~~~~~~~~---~~~~~~~~~~~~~pE~~~~--~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~-------- 224 (265)
T cd08217 158 KILGHDSS---FAKTYVGTPYYMSPEQLNH--MSYDEKSDIWSLGCLIYELCALSPPFTARNQLQLASKIKE-------- 224 (265)
T ss_pred ccccCCcc---cccccccCCCccChhhhcC--CCCCchhHHHHHHHHHHHHHHCCCcccCcCHHHHHHHHhc--------
Confidence 87543221 1234578999999999876 5688999999999999999999999987653322222110
Q ss_pred HHHHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHH
Q 007541 254 AIARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALR 333 (599)
Q Consensus 254 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~d 333 (599)
. .+.......+..+.+
T Consensus 225 -------------------------------------------------------------~---~~~~~~~~~~~~~~~ 240 (265)
T cd08217 225 -------------------------------------------------------------G---KFRRIPYRYSSELNE 240 (265)
T ss_pred -------------------------------------------------------------C---CCCCCccccCHHHHH
Confidence 0 011122346788999
Q ss_pred HHHHhcccCCCCCCCHHHHhcCccc
Q 007541 334 LLERMLAFEPKDRPTAEEALADPYF 358 (599)
Q Consensus 334 LL~~mL~~DP~~RpTa~e~L~HP~f 358 (599)
||.+||..||.+|||+.++|+|||+
T Consensus 241 l~~~~l~~~p~~Rp~~~~il~~~~~ 265 (265)
T cd08217 241 VIKSMLNVDPDKRPSTEELLQLPLI 265 (265)
T ss_pred HHHHHccCCcccCCCHHHHhhCCCC
Confidence 9999999999999999999999996
No 191
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=7.1e-40 Score=329.84 Aligned_cols=253 Identities=28% Similarity=0.495 Sum_probs=212.6
Q ss_pred ceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEE
Q 007541 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIY 103 (599)
Q Consensus 24 rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~iy 103 (599)
+|+++++||.|+||.||.+.+..+++.|++|++............+.+|+.+|+.++|+||+++++++.. ...++
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-----~~~~~ 75 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMD-----DNTLL 75 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEec-----CCeEE
Confidence 6999999999999999999999999999999987544444556678899999999999999999999954 35799
Q ss_pred EEEecCC-cCHHHHHHhC--CCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCCC
Q 007541 104 VVFELME-SDLHQVIKAN--DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT 180 (599)
Q Consensus 104 lV~E~~~-g~L~~~i~~~--~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~ 180 (599)
+||||+. ++|.+++... ..+++..+..++.||+.+|.|||+.|++|+||+|+||+++.++.+||+|||++.......
T Consensus 76 ~~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~ 155 (256)
T cd08221 76 IEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEY 155 (256)
T ss_pred EEEEecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEEeCCCCEEECcCcceEEccccc
Confidence 9999998 5999999775 468999999999999999999999999999999999999999999999999998653322
Q ss_pred CCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHhh
Q 007541 181 PTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVCL 260 (599)
Q Consensus 181 ~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~~ 260 (599)
. ......++..|+|||.+.+ ..++.++|+||+||++++|++|..+|.+.+..+....+.. |.
T Consensus 156 ~---~~~~~~~~~~y~ape~~~~--~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~--~~----------- 217 (256)
T cd08221 156 S---MAETVVGTPYYMSPELCQG--VKYNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIVQ--GN----------- 217 (256)
T ss_pred c---cccccCCCccccCHhhcCC--CCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHc--CC-----------
Confidence 1 2234578999999999876 5688999999999999999999999987655443333221 10
Q ss_pred hhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHhcc
Q 007541 261 LLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLA 340 (599)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL~ 340 (599)
+.......+..+.+||.+||.
T Consensus 218 -----------------------------------------------------------~~~~~~~~~~~~~~~i~~~l~ 238 (256)
T cd08221 218 -----------------------------------------------------------YTPVVSVYSSELISLVHSLLQ 238 (256)
T ss_pred -----------------------------------------------------------CCCCccccCHHHHHHHHHHcc
Confidence 011114567889999999999
Q ss_pred cCCCCCCCHHHHhcCccc
Q 007541 341 FEPKDRPTAEEALADPYF 358 (599)
Q Consensus 341 ~DP~~RpTa~e~L~HP~f 358 (599)
.||.+|||+.|+|+|||+
T Consensus 239 ~~p~~R~s~~~ll~~~~l 256 (256)
T cd08221 239 QDPEKRPTADEVLDQPLL 256 (256)
T ss_pred cCcccCCCHHHHhhCcCC
Confidence 999999999999999996
No 192
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=3.1e-40 Score=341.83 Aligned_cols=261 Identities=29% Similarity=0.468 Sum_probs=212.6
Q ss_pred cCCCCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCC
Q 007541 19 YGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRRE 98 (599)
Q Consensus 19 ~~~~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~ 98 (599)
-+...+|++++.||+|+||+||+|.+..+++.||||.+.... ......+.+|+.+++.++|+||+++++.+..
T Consensus 15 ~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~----- 87 (297)
T cd06656 15 GDPKKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQ--QPKKELIINEILVMRENKNPNIVNYLDSYLV----- 87 (297)
T ss_pred CChhhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCc--cchHHHHHHHHHHHHhCCCCCEeeEEEEEec-----
Confidence 355689999999999999999999999999999999986432 2344667899999999999999999999853
Q ss_pred CccEEEEEecCC-cCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCcccccc
Q 007541 99 FKDIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAF 177 (599)
Q Consensus 99 ~~~iylV~E~~~-g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~ 177 (599)
...+|+||||++ ++|.+++... .+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||++....
T Consensus 88 ~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~ 166 (297)
T cd06656 88 GDELWVVMEYLAGGSLTDVVTET-CMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQIT 166 (297)
T ss_pred CCEEEEeecccCCCCHHHHHHhC-CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEECcCccceEcc
Confidence 347999999998 5899988654 58999999999999999999999999999999999999999999999999987643
Q ss_pred CCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHH
Q 007541 178 NDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIAR 257 (599)
Q Consensus 178 ~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~ 257 (599)
.... ......++..|+|||.+.+ ..++.++|+||+||++|+|++|+.||.+.+....+..+.. .+.+
T Consensus 167 ~~~~---~~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~~~-~~~~------- 233 (297)
T cd06656 167 PEQS---KRSTMVGTPYWMAPEVVTR--KAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIAT-NGTP------- 233 (297)
T ss_pred CCcc---CcCcccCCccccCHHHHcC--CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeeecc-CCCC-------
Confidence 2221 1234568889999999876 6788999999999999999999999976553222111100 0000
Q ss_pred HhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHH
Q 007541 258 VCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLER 337 (599)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~ 337 (599)
........++.+.+||.+
T Consensus 234 --------------------------------------------------------------~~~~~~~~~~~~~~li~~ 251 (297)
T cd06656 234 --------------------------------------------------------------ELQNPERLSAVFRDFLNR 251 (297)
T ss_pred --------------------------------------------------------------CCCCccccCHHHHHHHHH
Confidence 001112456788999999
Q ss_pred hcccCCCCCCCHHHHhcCccccCcc
Q 007541 338 MLAFEPKDRPTAEEALADPYFKGLA 362 (599)
Q Consensus 338 mL~~DP~~RpTa~e~L~HP~f~~~~ 362 (599)
||..||.+|||++++|+||||+...
T Consensus 252 ~l~~~p~~Rps~~~il~~~~~~~~~ 276 (297)
T cd06656 252 CLEMDVDRRGSAKELLQHPFLKLAK 276 (297)
T ss_pred HccCChhhCcCHHHHhcCchhcccc
Confidence 9999999999999999999998654
No 193
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-41 Score=357.04 Aligned_cols=263 Identities=28% Similarity=0.422 Sum_probs=219.9
Q ss_pred cccccCCCCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcc-cChhhHHHHHHHHHHHHhcCCCCccccceeecC
Q 007541 15 FFTEYGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIF-EHVSDATRILREIKLLRLLRHPDIVEIKHILLP 93 (599)
Q Consensus 15 ~~~~~~~~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~-~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~ 93 (599)
.|..-+.-..|.=++.||.|+||-||.|+|..+.+.||||+++... ........|+.|+.+|++|+|||++.+.++|+.
T Consensus 18 LF~k~DPEklf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLr 97 (948)
T KOG0577|consen 18 LFFKDDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLR 97 (948)
T ss_pred HHccCCHHHHHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeec
Confidence 3433355567888899999999999999999999999999998543 334456789999999999999999999999976
Q ss_pred CCcCCCccEEEEEecCCcCHHHHHHhC-CCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCc
Q 007541 94 PSRREFKDIYVVFELMESDLHQVIKAN-DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGL 172 (599)
Q Consensus 94 ~s~~~~~~iylV~E~~~g~L~~~i~~~-~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGl 172 (599)
.. ..|||||||-|+-.+++.-+ .++.+.+|..|+.+.|.||.|||+.+.||||||.-|||+.+.|.|||+|||+
T Consensus 98 e~-----TaWLVMEYClGSAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLse~g~VKLaDFGS 172 (948)
T KOG0577|consen 98 EH-----TAWLVMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLSEPGLVKLADFGS 172 (948)
T ss_pred cc-----hHHHHHHHHhccHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEecCCCeeeeccccc
Confidence 53 57999999998766666533 4799999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCCCcccccccccCccccCccccccc-cCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCC
Q 007541 173 ARVAFNDTPTAIFWTDYVATRWYRAPELCGSF-FSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPS 251 (599)
Q Consensus 173 A~~~~~~~~~~~~~t~~~gt~~Y~APE~l~~~-~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~ 251 (599)
|..... -..++||++|||||+|+.. ...|+-++||||||++..||.-.+||+-..+-...+..|...-.
T Consensus 173 Asi~~P-------AnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALYHIAQNes--- 242 (948)
T KOG0577|consen 173 ASIMAP-------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNES--- 242 (948)
T ss_pred hhhcCc-------hhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHHHHHHhcCC---
Confidence 976532 1457999999999998542 25699999999999999999999999877776666665542110
Q ss_pred HHHHHHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHH
Q 007541 252 PEAIARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLA 331 (599)
Q Consensus 252 ~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a 331 (599)
| .+. -+.+|..+
T Consensus 243 -----------------------------------------------------------------P-tLq--s~eWS~~F 254 (948)
T KOG0577|consen 243 -----------------------------------------------------------------P-TLQ--SNEWSDYF 254 (948)
T ss_pred -----------------------------------------------------------------C-CCC--CchhHHHH
Confidence 0 011 24567789
Q ss_pred HHHHHHhcccCCCCCCCHHHHhcCccccC
Q 007541 332 LRLLERMLAFEPKDRPTAEEALADPYFKG 360 (599)
Q Consensus 332 ~dLL~~mL~~DP~~RpTa~e~L~HP~f~~ 360 (599)
+.|+..||+.-|.+|||.+++|.|+|+..
T Consensus 255 ~~Fvd~CLqKipqeRptse~ll~H~fv~R 283 (948)
T KOG0577|consen 255 RNFVDSCLQKIPQERPTSEELLKHRFVLR 283 (948)
T ss_pred HHHHHHHHhhCcccCCcHHHHhhcchhcc
Confidence 99999999999999999999999999864
No 194
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=2.2e-40 Score=337.55 Aligned_cols=256 Identities=29% Similarity=0.449 Sum_probs=210.9
Q ss_pred CceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccE
Q 007541 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDI 102 (599)
Q Consensus 23 ~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~i 102 (599)
++|++.+.||.|++|.||+|.+..+++.||+|++.... .......+.+|+.+++.++|+||+++.+.+... ..+
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~ 74 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEE-AEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKG-----SKL 74 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccc-cchHHHHHHHHHHHHHHcCCCCeeeeeEEEEEC-----CeE
Confidence 57999999999999999999999999999999986432 223445678999999999999999999988533 579
Q ss_pred EEEEecCC-cCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCCCC
Q 007541 103 YVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTP 181 (599)
Q Consensus 103 ylV~E~~~-g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~~ 181 (599)
|+|+||+. ++|.+++... .+++..++.++.||+.||.|||+.||+|+||+|+||+++.++.++|+|||+++.......
T Consensus 75 ~~v~e~~~~~~L~~~~~~~-~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~ 153 (274)
T cd06609 75 WIIMEYCGGGSCLDLLKPG-KLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTMS 153 (274)
T ss_pred EEEEEeeCCCcHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEcccccceeeccccc
Confidence 99999998 5899998876 799999999999999999999999999999999999999999999999999987643321
Q ss_pred CcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHhhh
Q 007541 182 TAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVCLL 261 (599)
Q Consensus 182 ~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~~~ 261 (599)
......++..|+|||.+.+ ..++.++||||+||++|+|++|++||.+.+....+..+...
T Consensus 154 ---~~~~~~~~~~y~~PE~~~~--~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~--------------- 213 (274)
T cd06609 154 ---KRNTFVGTPFWMAPEVIKQ--SGYDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIPKN--------------- 213 (274)
T ss_pred ---ccccccCCccccChhhhcc--CCCCchhhHHHHHHHHHHHHhCCCCcccCchHHHHHHhhhc---------------
Confidence 1234568889999999877 56999999999999999999999999765533222211110
Q ss_pred hhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHhccc
Q 007541 262 LNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAF 341 (599)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL~~ 341 (599)
.+..+. ...+++.+.++|.+||..
T Consensus 214 ------------------------------------------------------~~~~~~--~~~~~~~~~~~l~~~l~~ 237 (274)
T cd06609 214 ------------------------------------------------------NPPSLE--GNKFSKPFKDFVSLCLNK 237 (274)
T ss_pred ------------------------------------------------------CCCCCc--ccccCHHHHHHHHHHhhC
Confidence 000000 012677899999999999
Q ss_pred CCCCCCCHHHHhcCccccCc
Q 007541 342 EPKDRPTAEEALADPYFKGL 361 (599)
Q Consensus 342 DP~~RpTa~e~L~HP~f~~~ 361 (599)
||++|||++++|+||||...
T Consensus 238 ~p~~Rpt~~~il~~~~~~~~ 257 (274)
T cd06609 238 DPKERPSAKELLKHKFIKKA 257 (274)
T ss_pred ChhhCcCHHHHhhChhhcCC
Confidence 99999999999999999864
No 195
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=3.5e-40 Score=337.71 Aligned_cols=258 Identities=25% Similarity=0.437 Sum_probs=203.8
Q ss_pred CceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccE
Q 007541 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDI 102 (599)
Q Consensus 23 ~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~i 102 (599)
++|+++++||+|+||+||+|++..+++.||||++.... .......+.+|+.+|+.++||||+++++.+... ...
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-----~~~ 74 (279)
T cd06619 1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDI-TVELQKQIMSELEILYKCDSPYIIGFYGAFFVE-----NRI 74 (279)
T ss_pred CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCC-ChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEEC-----CEE
Confidence 46889999999999999999999999999999986432 223445688999999999999999999998543 468
Q ss_pred EEEEecCCc-CHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCCCC
Q 007541 103 YVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTP 181 (599)
Q Consensus 103 ylV~E~~~g-~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~~ 181 (599)
++||||+++ +|..+ ..+++..+..++.||+.||.|||+.||+|+||||+|||++.++.+||+|||++.......
T Consensus 75 ~lv~e~~~~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~~- 149 (279)
T cd06619 75 SICTEFMDGGSLDVY----RKIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSI- 149 (279)
T ss_pred EEEEecCCCCChHHh----hcCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEECCCCCEEEeeCCcceeccccc-
Confidence 999999995 55433 357899999999999999999999999999999999999999999999999997653221
Q ss_pred CcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHhhh
Q 007541 182 TAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVCLL 261 (599)
Q Consensus 182 ~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~~~ 261 (599)
....++|..|+|||.+.+ ..++.++|+||+||++|+|++|+.||........ .+....+
T Consensus 150 ----~~~~~~~~~y~aPE~~~~--~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~---------~~~~~~~------ 208 (279)
T cd06619 150 ----AKTYVGTNAYMAPERISG--EQYGIHSDVWSLGISFMELALGRFPYPQIQKNQG---------SLMPLQL------ 208 (279)
T ss_pred ----ccCCCCChhhcCceeecC--CCCCCcchHHHHHHHHHHHHhCCCCchhhccccc---------ccchHHH------
Confidence 234578999999999876 6789999999999999999999999965321110 0000000
Q ss_pred hhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHhccc
Q 007541 262 LNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAF 341 (599)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL~~ 341 (599)
........+.. ......++.+.+||.+||+.
T Consensus 209 -----------------------------------------------~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~ 239 (279)
T cd06619 209 -----------------------------------------------LQCIVDEDPPV--LPVGQFSEKFVHFITQCMRK 239 (279)
T ss_pred -----------------------------------------------HHHHhccCCCC--CCCCcCCHHHHHHHHHHhhC
Confidence 00000000000 01234678899999999999
Q ss_pred CCCCCCCHHHHhcCccccCc
Q 007541 342 EPKDRPTAEEALADPYFKGL 361 (599)
Q Consensus 342 DP~~RpTa~e~L~HP~f~~~ 361 (599)
||.+||+++|+|.||||...
T Consensus 240 ~P~~Rp~~~eil~~~~~~~~ 259 (279)
T cd06619 240 QPKERPAPENLMDHPFIVQY 259 (279)
T ss_pred ChhhCCCHHHHhcCcccccc
Confidence 99999999999999999865
No 196
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=5.2e-40 Score=332.95 Aligned_cols=262 Identities=28% Similarity=0.462 Sum_probs=209.6
Q ss_pred CCCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhc-CCCCccccceeecCCCc-CC
Q 007541 21 EGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLL-RHPDIVEIKHILLPPSR-RE 98 (599)
Q Consensus 21 ~~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l-~HpnIv~l~~v~~~~s~-~~ 98 (599)
..++|++.+.||.|++|.||+|.++.+++.|++|++.... .....+.+|+.+++.+ .|+||+++++++..... ..
T Consensus 4 ~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~ 80 (275)
T cd06608 4 PTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIE---DEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGN 80 (275)
T ss_pred chhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCc---hhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCc
Confidence 4689999999999999999999999999999999986432 2345678999999998 69999999999976543 34
Q ss_pred CccEEEEEecCC-cCHHHHHHh----CCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCcc
Q 007541 99 FKDIYVVFELME-SDLHQVIKA----NDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLA 173 (599)
Q Consensus 99 ~~~iylV~E~~~-g~L~~~i~~----~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA 173 (599)
...+|+||||++ ++|.+++.. +..+++..++.++.||+.||.|||+.||+|+||+|+||+++.++.+||+|||++
T Consensus 81 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~~~~~~~~l~d~~~~ 160 (275)
T cd06608 81 DDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLTKNAEVKLVDFGVS 160 (275)
T ss_pred ceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEccCCeEEECCCccc
Confidence 567999999999 488888764 357999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCcccccccccCccccCccccccc---cCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCC
Q 007541 174 RVAFNDTPTAIFWTDYVATRWYRAPELCGSF---FSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTP 250 (599)
Q Consensus 174 ~~~~~~~~~~~~~t~~~gt~~Y~APE~l~~~---~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p 250 (599)
........ ......++..|+|||++... ...++.++||||||||+++|++|++||.+.+....+..+... +
T Consensus 161 ~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~---~ 234 (275)
T cd06608 161 AQLDSTLG---RRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRALFKIPRN---P 234 (275)
T ss_pred eecccchh---hhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHHHHHhhcc---C
Confidence 76532221 12345688999999987431 135788999999999999999999999765433322222110 0
Q ss_pred CHHHHHHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHH
Q 007541 251 SPEAIARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPL 330 (599)
Q Consensus 251 ~~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 330 (599)
...+ ......+..
T Consensus 235 ------------------------------------------------------------------~~~~-~~~~~~~~~ 247 (275)
T cd06608 235 ------------------------------------------------------------------PPTL-KSPENWSKK 247 (275)
T ss_pred ------------------------------------------------------------------CCCC-CchhhcCHH
Confidence 0000 001135678
Q ss_pred HHHHHHHhcccCCCCCCCHHHHhcCccc
Q 007541 331 ALRLLERMLAFEPKDRPTAEEALADPYF 358 (599)
Q Consensus 331 a~dLL~~mL~~DP~~RpTa~e~L~HP~f 358 (599)
+.+||.+||..||.+|||+.|+++|||+
T Consensus 248 ~~~li~~~l~~dp~~Rpt~~~ll~~~~~ 275 (275)
T cd06608 248 FNDFISECLIKNYEQRPFMEELLEHPFI 275 (275)
T ss_pred HHHHHHHHhhcChhhCcCHHHHhcCCCC
Confidence 9999999999999999999999999996
No 197
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=7.8e-40 Score=339.72 Aligned_cols=262 Identities=25% Similarity=0.390 Sum_probs=211.2
Q ss_pred CceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCccc-ChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCcc
Q 007541 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFE-HVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKD 101 (599)
Q Consensus 23 ~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~-~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~ 101 (599)
+.|++++.||+|+||.||+|.+..+++.||||.+..... .......+.+|+.+++.++||||+++++.+. ....
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~-----~~~~ 75 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFE-----TKRH 75 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEe-----cCCE
Confidence 469999999999999999999999999999999875322 2234567789999999999999999999884 3357
Q ss_pred EEEEEecCC-cCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCCC
Q 007541 102 IYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT 180 (599)
Q Consensus 102 iylV~E~~~-g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~ 180 (599)
+|+||||++ ++|.+++...+.+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||+++......
T Consensus 76 ~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~ 155 (305)
T cd05609 76 LCMVMEYVEGGDCATLLKNIGALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSL 155 (305)
T ss_pred EEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEECCCCCEEEeeCCCccccCcCc
Confidence 999999998 5999999888889999999999999999999999999999999999999999999999999987421110
Q ss_pred CC------------cccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcC
Q 007541 181 PT------------AIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLG 248 (599)
Q Consensus 181 ~~------------~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG 248 (599)
.. ........++..|+|||.+.. ..++.++|||||||++++|++|..||.+.+..+.+..+....
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~~~~~~~~- 232 (305)
T cd05609 156 TTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILR--QGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDD- 232 (305)
T ss_pred cccccccccccchhhccccCCccCccccCchhccC--CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcc-
Confidence 00 000112457888999999876 578999999999999999999999998765443332221100
Q ss_pred CCCHHHHHHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCC
Q 007541 249 TPSPEAIARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNAN 328 (599)
Q Consensus 249 ~p~~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 328 (599)
..........+
T Consensus 233 ---------------------------------------------------------------------~~~~~~~~~~~ 243 (305)
T cd05609 233 ---------------------------------------------------------------------IEWPEGDEALP 243 (305)
T ss_pred ---------------------------------------------------------------------cCCCCccccCC
Confidence 00001112467
Q ss_pred HHHHHHHHHhcccCCCCCCC---HHHHhcCccccCc
Q 007541 329 PLALRLLERMLAFEPKDRPT---AEEALADPYFKGL 361 (599)
Q Consensus 329 ~~a~dLL~~mL~~DP~~RpT---a~e~L~HP~f~~~ 361 (599)
+.+.+||.+||+.||.+||| +.++|+||||...
T Consensus 244 ~~~~~li~~~l~~~P~~R~~~~~~~~ll~~~~~~~~ 279 (305)
T cd05609 244 ADAQDLISRLLRQNPLERLGTGGAFEVKQHRFFLGL 279 (305)
T ss_pred HHHHHHHHHHhccChhhccCccCHHHHHhCccccCC
Confidence 88999999999999999998 8999999999764
No 198
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=5.6e-40 Score=331.08 Aligned_cols=258 Identities=29% Similarity=0.446 Sum_probs=208.7
Q ss_pred CCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCcc
Q 007541 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKD 101 (599)
Q Consensus 22 ~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~ 101 (599)
.++|++.+.||.|+||.||+|.+..+++.+|+|++.... ......+.+|+.+++.++||||+++++.+.. ...
T Consensus 2 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-----~~~ 74 (262)
T cd06613 2 QEDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEP--GDDFEIIQQEISMLKECRHPNIVAYFGSYLR-----RDK 74 (262)
T ss_pred ccceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCc--hhhHHHHHHHHHHHHhCCCCChhceEEEEEe-----CCE
Confidence 368999999999999999999999999999999987432 2255678899999999999999999998843 357
Q ss_pred EEEEEecCC-cCHHHHHHhC-CCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCC
Q 007541 102 IYVVFELME-SDLHQVIKAN-DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFND 179 (599)
Q Consensus 102 iylV~E~~~-g~L~~~i~~~-~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~ 179 (599)
+|+||||++ ++|.+++... ..+++..++.++.||+.||.|||+.||+|+||||+||+++.++.+||+|||++......
T Consensus 75 ~~l~~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~ 154 (262)
T cd06613 75 LWIVMEYCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLTEDGDVKLADFGVSAQLTAT 154 (262)
T ss_pred EEEEEeCCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEECCCCCEEECccccchhhhhh
Confidence 999999999 4899988776 68999999999999999999999999999999999999999999999999999765432
Q ss_pred CCCcccccccccCccccCccccccc-cCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHH
Q 007541 180 TPTAIFWTDYVATRWYRAPELCGSF-FSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARV 258 (599)
Q Consensus 180 ~~~~~~~t~~~gt~~Y~APE~l~~~-~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~ 258 (599)
.. ......++..|+|||++... ...++.++||||+||++++|++|++||.+.+.......+...--.
T Consensus 155 ~~---~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~--------- 222 (262)
T cd06613 155 IA---KRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLISKSNFP--------- 222 (262)
T ss_pred hh---ccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCC---------
Confidence 11 12345788899999998651 126888999999999999999999999876544332222110000
Q ss_pred hhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHh
Q 007541 259 CLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERM 338 (599)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~m 338 (599)
+ .........+..+.+||++|
T Consensus 223 ----------------------------------------------------------~-~~~~~~~~~~~~~~~li~~~ 243 (262)
T cd06613 223 ----------------------------------------------------------P-PKLKDKEKWSPVFHDFIKKC 243 (262)
T ss_pred ----------------------------------------------------------C-ccccchhhhhHHHHHHHHHH
Confidence 0 00001123456789999999
Q ss_pred cccCCCCCCCHHHHhcCcc
Q 007541 339 LAFEPKDRPTAEEALADPY 357 (599)
Q Consensus 339 L~~DP~~RpTa~e~L~HP~ 357 (599)
|..||..|||+.++|.|+|
T Consensus 244 l~~~p~~Rpt~~~il~~~~ 262 (262)
T cd06613 244 LTKDPKKRPTATKLLQHPF 262 (262)
T ss_pred cCCChhhCCCHHHHhcCCC
Confidence 9999999999999999998
No 199
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=1.6e-40 Score=337.04 Aligned_cols=260 Identities=25% Similarity=0.397 Sum_probs=207.2
Q ss_pred CCCCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCC
Q 007541 20 GEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREF 99 (599)
Q Consensus 20 ~~~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~ 99 (599)
+..++|++.+.||+|+||.||+|.++.+++.||+|++... .......+.+|+.+++.++||||+++++.+...
T Consensus 6 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~--~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~----- 78 (267)
T cd06646 6 NPQHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLE--PGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSR----- 78 (267)
T ss_pred CchhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecC--ccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeC-----
Confidence 4567899999999999999999999999999999998643 223345677999999999999999999998533
Q ss_pred ccEEEEEecCC-cCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccC
Q 007541 100 KDIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFN 178 (599)
Q Consensus 100 ~~iylV~E~~~-g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~ 178 (599)
..+|+||||++ ++|.+++...+.+++..+..++.||+.||+|||+.||+||||||+|||++.++.+||+|||++.....
T Consensus 79 ~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd06646 79 EKLWICMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLTDNGDVKLADFGVAAKITA 158 (267)
T ss_pred CEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEECcCccceeecc
Confidence 47899999999 58999998878899999999999999999999999999999999999999999999999999986532
Q ss_pred CCCCcccccccccCccccCcccccc-ccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHH
Q 007541 179 DTPTAIFWTDYVATRWYRAPELCGS-FFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIAR 257 (599)
Q Consensus 179 ~~~~~~~~t~~~gt~~Y~APE~l~~-~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~ 257 (599)
... ......++..|+|||.+.. ....++.++|+||+||++++|++|+.||...+.......+...
T Consensus 159 ~~~---~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~~~~~----------- 224 (267)
T cd06646 159 TIA---KRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKS----------- 224 (267)
T ss_pred ccc---ccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhheeeecC-----------
Confidence 211 1134568889999998742 1245788999999999999999999998644322111100000
Q ss_pred HhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHH
Q 007541 258 VCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLER 337 (599)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~ 337 (599)
...+ +........+..+.+||++
T Consensus 225 --------------------------------------------------------~~~~-~~~~~~~~~~~~~~~li~~ 247 (267)
T cd06646 225 --------------------------------------------------------NFQP-PKLKDKTKWSSTFHNFVKI 247 (267)
T ss_pred --------------------------------------------------------CCCC-CCCccccccCHHHHHHHHH
Confidence 0000 0001112467889999999
Q ss_pred hcccCCCCCCCHHHHhcCcc
Q 007541 338 MLAFEPKDRPTAEEALADPY 357 (599)
Q Consensus 338 mL~~DP~~RpTa~e~L~HP~ 357 (599)
||+.||.+|||++++|+|+|
T Consensus 248 ~l~~~P~~Rp~~~~il~~l~ 267 (267)
T cd06646 248 SLTKNPKKRPTAERLLTHLF 267 (267)
T ss_pred HhhCChhhCcCHHHHhcCCC
Confidence 99999999999999999987
No 200
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=9e-40 Score=331.39 Aligned_cols=260 Identities=26% Similarity=0.453 Sum_probs=207.5
Q ss_pred CceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCccc---ChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCC
Q 007541 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFE---HVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREF 99 (599)
Q Consensus 23 ~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~---~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~ 99 (599)
..|++.+.||+|+||.||+|.+..+|+.||||++..... .......+.+|+.+++.++|+||+++++++.... .
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~---~ 78 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPM---E 78 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCC---C
Confidence 579999999999999999999999999999998853221 1233567889999999999999999999874321 2
Q ss_pred ccEEEEEecCC-cCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccC
Q 007541 100 KDIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFN 178 (599)
Q Consensus 100 ~~iylV~E~~~-g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~ 178 (599)
..+|+||||++ ++|.+++...+.+++..+..++.||+.||.|||+.||+|+||||+|||++.++.+||+|||+++....
T Consensus 79 ~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~ 158 (265)
T cd06652 79 RTLSIFMEHMPGGSIKDQLKSYGALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRDSVGNVKLGDFGASKRLQT 158 (265)
T ss_pred ceEEEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEecCCCCEEECcCcccccccc
Confidence 46899999998 59999998877899999999999999999999999999999999999999999999999999976432
Q ss_pred CCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHH
Q 007541 179 DTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARV 258 (599)
Q Consensus 179 ~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~ 258 (599)
............++..|+|||.+.+ ..++.++|+|||||++|+|++|+.||.+......+..+. ..+
T Consensus 159 ~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~---~~~-------- 225 (265)
T cd06652 159 ICLSGTGMKSVTGTPYWMSPEVISG--EGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAAIFKIA---TQP-------- 225 (265)
T ss_pred ccccccccccCCCCccccChhhhcC--CCCCcchhHHHHHHHHHHHhhCCCCCCccchHHHHHHHh---cCC--------
Confidence 1111111233468889999999876 578999999999999999999999997543322221111 000
Q ss_pred hhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHh
Q 007541 259 CLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERM 338 (599)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~m 338 (599)
. ........+..+.++|.+|
T Consensus 226 ----------------------------------------------------------~--~~~~~~~~~~~~~~~i~~~ 245 (265)
T cd06652 226 ----------------------------------------------------------T--NPVLPPHVSDHCRDFLKRI 245 (265)
T ss_pred ----------------------------------------------------------C--CCCCchhhCHHHHHHHHHH
Confidence 0 0011124567889999999
Q ss_pred cccCCCCCCCHHHHhcCcccc
Q 007541 339 LAFEPKDRPTAEEALADPYFK 359 (599)
Q Consensus 339 L~~DP~~RpTa~e~L~HP~f~ 359 (599)
|. +|++|||++|+|+|||+.
T Consensus 246 l~-~p~~Rp~~~~il~~~~~~ 265 (265)
T cd06652 246 FV-EAKLRPSADELLRHTFVH 265 (265)
T ss_pred hc-ChhhCCCHHHHhcCcccC
Confidence 94 999999999999999984
No 201
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=8.9e-40 Score=328.46 Aligned_cols=252 Identities=29% Similarity=0.472 Sum_probs=208.5
Q ss_pred ceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEE
Q 007541 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIY 103 (599)
Q Consensus 24 rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~iy 103 (599)
+|++.+.||+|+||.||+|.+..+++.||||.+............+.+|+.+|+.++||||+++++.+.. ...++
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-----~~~~~ 75 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLE-----DKALM 75 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEec-----CCEEE
Confidence 6999999999999999999999999999999987544444456778899999999999999999998843 34799
Q ss_pred EEEecCC-cCHHHHHHhC--CCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCC-CceeeeccCccccccCC
Q 007541 104 VVFELME-SDLHQVIKAN--DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANAD-CKLKICDFGLARVAFND 179 (599)
Q Consensus 104 lV~E~~~-g~L~~~i~~~--~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~-~~lKL~DFGlA~~~~~~ 179 (599)
+||||++ ++|.+++... ..+++..+..++.|++.+|+|||++||+|+||||+||+++.+ +.+||+|||++......
T Consensus 76 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~ 155 (256)
T cd08220 76 IVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLDKHKMVVKIGDFGISKILSSK 155 (256)
T ss_pred EEEecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEccCCCceecCCC
Confidence 9999998 5999999764 358999999999999999999999999999999999999865 45899999999875432
Q ss_pred CCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHh
Q 007541 180 TPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVC 259 (599)
Q Consensus 180 ~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~ 259 (599)
... ....++..|+|||.+.+ ..++.++||||+||++++|++|+.+|.+.+.......+...
T Consensus 156 ~~~----~~~~~~~~y~aPE~~~~--~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~------------- 216 (256)
T cd08220 156 SKA----YTVVGTPCYISPELCEG--KPYNQKSDIWALGCVLYELASLKRAFEAANLPALVLKIMSG------------- 216 (256)
T ss_pred ccc----cccccCCcccCchhccC--CCCCcccchHHHHHHHHHHHhCCCCcccCchHHHHHHHHhc-------------
Confidence 211 23467889999999876 57889999999999999999999999876544332222110
Q ss_pred hhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHhc
Q 007541 260 LLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERML 339 (599)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL 339 (599)
.........++.+.+||.+||
T Consensus 217 -----------------------------------------------------------~~~~~~~~~~~~l~~li~~~l 237 (256)
T cd08220 217 -----------------------------------------------------------TFAPISDRYSPDLRQLILSML 237 (256)
T ss_pred -----------------------------------------------------------CCCCCCCCcCHHHHHHHHHHc
Confidence 001112246778999999999
Q ss_pred ccCCCCCCCHHHHhcCccc
Q 007541 340 AFEPKDRPTAEEALADPYF 358 (599)
Q Consensus 340 ~~DP~~RpTa~e~L~HP~f 358 (599)
..||.+|||+.|+|+||||
T Consensus 238 ~~~p~~Rpt~~~ll~~p~~ 256 (256)
T cd08220 238 NLDPSKRPQLSQIMAQPIC 256 (256)
T ss_pred cCChhhCCCHHHHhhCCCC
Confidence 9999999999999999997
No 202
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=5.5e-40 Score=335.61 Aligned_cols=258 Identities=25% Similarity=0.442 Sum_probs=203.2
Q ss_pred CceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHH-HHhcCCCCccccceeecCCCcCCCcc
Q 007541 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKL-LRLLRHPDIVEIKHILLPPSRREFKD 101 (599)
Q Consensus 23 ~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~i-L~~l~HpnIv~l~~v~~~~s~~~~~~ 101 (599)
++|++++.||+|+||.||+|.++.+|+.||||+++...... ....+..|+.+ ++.+.||||+++++.+.. ...
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~-----~~~ 74 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQ-EQKRLLMDLDISMRSVDCPYTVTFYGALFR-----EGD 74 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcH-HHHHHHHHHHHHHHHcCCCCeeeeeEEEec-----CCc
Confidence 47999999999999999999999999999999987543322 33456667775 677789999999999853 347
Q ss_pred EEEEEecCCcCHHHHHHh----CCCCCHHHHHHHHHHHHhhhhhcccC-ceEeecCCCCcEEeCCCCceeeeccCccccc
Q 007541 102 IYVVFELMESDLHQVIKA----NDDLTPEHYQFFLYQLLRGLKYIHTA-NVFHRDLKPKNILANADCKLKICDFGLARVA 176 (599)
Q Consensus 102 iylV~E~~~g~L~~~i~~----~~~lse~~i~~i~~QLl~aL~yLHs~-gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~ 176 (599)
+|+||||++++|.+++.. ...+++..++.++.||+.||.|||++ +++||||||+|||++.++.+||+|||+++..
T Consensus 75 ~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~ 154 (283)
T cd06617 75 VWICMEVMDTSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLINRNGQVKLCDFGISGYL 154 (283)
T ss_pred EEEEhhhhcccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeeccccccc
Confidence 999999999999888764 24689999999999999999999997 9999999999999999999999999999765
Q ss_pred cCCCCCcccccccccCccccCccccccc--cCCCCcchhhHhHHHHHHHHHhCCCCCCCCC-hhhHHHHHHHhcCCCCHH
Q 007541 177 FNDTPTAIFWTDYVATRWYRAPELCGSF--FSKYTPAIDIWSIGCIFAELLTGKPLFPGKN-VVHQLDIMTDLLGTPSPE 253 (599)
Q Consensus 177 ~~~~~~~~~~t~~~gt~~Y~APE~l~~~--~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~-~~~~l~~I~~~lG~p~~e 253 (599)
..... .+...++..|+|||.+.+. ...++.++|+||+||++++|++|+.||.... ..+.+..+..
T Consensus 155 ~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~-------- 222 (283)
T cd06617 155 VDSVA----KTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVVE-------- 222 (283)
T ss_pred ccccc----cccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHHHHHh--------
Confidence 32211 1234678899999987541 1357889999999999999999999986422 1111111100
Q ss_pred HHHHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHH
Q 007541 254 AIARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALR 333 (599)
Q Consensus 254 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~d 333 (599)
.. ...+ ....++..+.+
T Consensus 223 ---------------------------------------------------------~~----~~~~--~~~~~~~~l~~ 239 (283)
T cd06617 223 ---------------------------------------------------------EP----SPQL--PAEKFSPEFQD 239 (283)
T ss_pred ---------------------------------------------------------cC----CCCC--CccccCHHHHH
Confidence 00 0000 01235788999
Q ss_pred HHHHhcccCCCCCCCHHHHhcCccccCc
Q 007541 334 LLERMLAFEPKDRPTAEEALADPYFKGL 361 (599)
Q Consensus 334 LL~~mL~~DP~~RpTa~e~L~HP~f~~~ 361 (599)
||.+||..||.+|||+.++|+||||...
T Consensus 240 li~~~l~~~p~~Rp~~~~il~~~~~~~~ 267 (283)
T cd06617 240 FVNKCLKKNYKERPNYPELLQHPFFELH 267 (283)
T ss_pred HHHHHccCChhhCcCHHHHhcCchhhhc
Confidence 9999999999999999999999999864
No 203
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=6.6e-40 Score=330.09 Aligned_cols=253 Identities=26% Similarity=0.472 Sum_probs=208.9
Q ss_pred ceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEE
Q 007541 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIY 103 (599)
Q Consensus 24 rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~iy 103 (599)
+|++.+.||+|+||.||++.+..+|+.||||.+............+.+|+.+++.++|+||+++.+++. +..+.|
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~~~ 75 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFE-----ENGNLY 75 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeec-----CCCeEE
Confidence 699999999999999999999999999999998753333445567889999999999999999999984 335799
Q ss_pred EEEecCC-cCHHHHHHhCC--CCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCCC
Q 007541 104 VVFELME-SDLHQVIKAND--DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT 180 (599)
Q Consensus 104 lV~E~~~-g~L~~~i~~~~--~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~ 180 (599)
+||||+. ++|.+.+.... .+++..+..++.||+.||.|||++|++|+||+|+|||++.++.++|+|||++.......
T Consensus 76 lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~ 155 (256)
T cd08218 76 IVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTV 155 (256)
T ss_pred EEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEEeeccceeecCcch
Confidence 9999998 59999987643 57899999999999999999999999999999999999999999999999997653322
Q ss_pred CCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHhh
Q 007541 181 PTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVCL 260 (599)
Q Consensus 181 ~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~~ 260 (599)
.. .....++..|+|||++.+ ..++.++|+||+||++++|++|+.||...+..+....+.. |.
T Consensus 156 ~~---~~~~~~~~~~~~pe~~~~--~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~--~~----------- 217 (256)
T cd08218 156 EL---ARTCIGTPYYLSPEICEN--RPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKIIR--GS----------- 217 (256)
T ss_pred hh---hhhccCCccccCHHHhCC--CCCCCccchhHHHHHHHHHHcCCCCccCCCHHHHHHHHhc--CC-----------
Confidence 11 123457888999999876 5788899999999999999999999976554443322211 00
Q ss_pred hhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHhcc
Q 007541 261 LLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLA 340 (599)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL~ 340 (599)
........+..+.+||.+||+
T Consensus 218 -----------------------------------------------------------~~~~~~~~~~~~~~li~~~l~ 238 (256)
T cd08218 218 -----------------------------------------------------------YPPVSSHYSYDLRNLVSQLFK 238 (256)
T ss_pred -----------------------------------------------------------CCCCcccCCHHHHHHHHHHhh
Confidence 001113467789999999999
Q ss_pred cCCCCCCCHHHHhcCccc
Q 007541 341 FEPKDRPTAEEALADPYF 358 (599)
Q Consensus 341 ~DP~~RpTa~e~L~HP~f 358 (599)
.||.+||++.|+|+||||
T Consensus 239 ~~p~~Rp~~~~vl~~~~~ 256 (256)
T cd08218 239 RNPRDRPSVNSILEKNFI 256 (256)
T ss_pred CChhhCcCHHHHhhCcCC
Confidence 999999999999999998
No 204
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=8.4e-40 Score=330.37 Aligned_cols=262 Identities=26% Similarity=0.424 Sum_probs=210.8
Q ss_pred CceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccE
Q 007541 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDI 102 (599)
Q Consensus 23 ~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~i 102 (599)
++|++.+.||.|+||+||+|.+..++..||+|++....... ....+.+|+.+|+.++|+||+++++.+.. ...+
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-----~~~~ 74 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQT-SVDELRKEVQAMSQCNHPNVVKYYTSFVV-----GDEL 74 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcch-HHHHHHHHHHHHHhcCCCCEEEEEEEEee-----CCEE
Confidence 47999999999999999999999999999999986433322 56778899999999999999999998843 3578
Q ss_pred EEEEecCC-cCHHHHHHhC---CCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccC
Q 007541 103 YVVFELME-SDLHQVIKAN---DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFN 178 (599)
Q Consensus 103 ylV~E~~~-g~L~~~i~~~---~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~ 178 (599)
|+|+|++. ++|.+++... ..+++..++.++.||+.||.|||+.||+|+||||+||+++.++.+||+|||++.....
T Consensus 75 ~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~ 154 (267)
T cd06610 75 WLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLGEDGSVKIADFGVSASLAD 154 (267)
T ss_pred EEEEeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEcccchHHHhcc
Confidence 99999998 5899999764 4589999999999999999999999999999999999999999999999999977643
Q ss_pred CCCCc-ccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHH
Q 007541 179 DTPTA-IFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIAR 257 (599)
Q Consensus 179 ~~~~~-~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~ 257 (599)
..... ......+++..|+|||.+... ..++.++|+||+||++++|++|+.||...+....+..+... .+
T Consensus 155 ~~~~~~~~~~~~~~~~~y~~Pe~~~~~-~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~---~~------ 224 (267)
T cd06610 155 GGDRTRKVRKTFVGTPCWMAPEVMEQV-HGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQN---DP------ 224 (267)
T ss_pred CccccccccccccCChhhcChHHHccc-cCcCcccchHhHhHHHHHHHhCCCCccccChhhhHHHHhcC---CC------
Confidence 32211 112334688999999988662 36889999999999999999999999765543322221110 00
Q ss_pred HhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHH
Q 007541 258 VCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLER 337 (599)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~ 337 (599)
........+...++.+.+||.+
T Consensus 225 ----------------------------------------------------------~~~~~~~~~~~~~~~~~~li~~ 246 (267)
T cd06610 225 ----------------------------------------------------------PSLETGADYKKYSKSFRKMISL 246 (267)
T ss_pred ----------------------------------------------------------CCcCCccccccccHHHHHHHHH
Confidence 0000011124567889999999
Q ss_pred hcccCCCCCCCHHHHhcCccc
Q 007541 338 MLAFEPKDRPTAEEALADPYF 358 (599)
Q Consensus 338 mL~~DP~~RpTa~e~L~HP~f 358 (599)
||..||.+|||++|+|+||||
T Consensus 247 ~l~~~p~~Rp~~~~ll~~p~~ 267 (267)
T cd06610 247 CLQKDPSKRPTAEELLKHKFF 267 (267)
T ss_pred HcCCChhhCcCHHHHhhCCCC
Confidence 999999999999999999998
No 205
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=2.4e-40 Score=338.30 Aligned_cols=260 Identities=26% Similarity=0.425 Sum_probs=210.7
Q ss_pred CCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCcc
Q 007541 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKD 101 (599)
Q Consensus 22 ~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~ 101 (599)
.++|++++.||.|+||+||++.+..++..||+|.+... .......+.+|+.+++.++|+||+++++.+... ..
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~ 76 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIE--SEEELEDFMVEIDILSECKHPNIVGLYEAYFYE-----NK 76 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeC--CHHHHHHHHHHHHHHHhCCCCceeEEEEEEecC-----Ce
Confidence 46799999999999999999999999999999998642 334556788999999999999999999998543 47
Q ss_pred EEEEEecCCc-CHHHHHHhC-CCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCC
Q 007541 102 IYVVFELMES-DLHQVIKAN-DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFND 179 (599)
Q Consensus 102 iylV~E~~~g-~L~~~i~~~-~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~ 179 (599)
+|+||||+++ +|.+++... ..+++..++.++.||+.||.|||++||+|+||||+||+++.++.++|+|||++......
T Consensus 77 ~~lv~e~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~ 156 (280)
T cd06611 77 LWILIEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLTLDGDVKLADFGVSAKNKST 156 (280)
T ss_pred EEEEeeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEECCCCCEEEccCccchhhccc
Confidence 8999999994 899888764 46999999999999999999999999999999999999999999999999998764322
Q ss_pred CCCcccccccccCccccCccccccc---cCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHH
Q 007541 180 TPTAIFWTDYVATRWYRAPELCGSF---FSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIA 256 (599)
Q Consensus 180 ~~~~~~~t~~~gt~~Y~APE~l~~~---~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~ 256 (599)
... .....++..|+|||++... ...++.++||||+||++|+|++|++||.+.+....+..+.. +
T Consensus 157 ~~~---~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~~~~~~~--~-------- 223 (280)
T cd06611 157 LQK---RDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVLLKILK--S-------- 223 (280)
T ss_pred ccc---cceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHHHHHHhc--C--------
Confidence 211 1334688899999987421 13477899999999999999999999987654332222211 0
Q ss_pred HHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHH
Q 007541 257 RVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLE 336 (599)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~ 336 (599)
.. +........+..+.+||.
T Consensus 224 -----------------------------------------------------------~~-~~~~~~~~~~~~~~~li~ 243 (280)
T cd06611 224 -----------------------------------------------------------EP-PTLDQPSKWSSSFNDFLK 243 (280)
T ss_pred -----------------------------------------------------------CC-CCcCCcccCCHHHHHHHH
Confidence 00 000111246778999999
Q ss_pred HhcccCCCCCCCHHHHhcCccccCc
Q 007541 337 RMLAFEPKDRPTAEEALADPYFKGL 361 (599)
Q Consensus 337 ~mL~~DP~~RpTa~e~L~HP~f~~~ 361 (599)
+||+.||.+|||++++|+||||...
T Consensus 244 ~~l~~~p~~Rps~~~il~~~~~~~~ 268 (280)
T cd06611 244 SCLVKDPDDRPTAAELLKHPFVSDQ 268 (280)
T ss_pred HHhccChhhCcCHHHHhcChhhccc
Confidence 9999999999999999999999865
No 206
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=4.5e-43 Score=345.31 Aligned_cols=255 Identities=25% Similarity=0.431 Sum_probs=215.8
Q ss_pred CceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccE
Q 007541 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDI 102 (599)
Q Consensus 23 ~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~i 102 (599)
.-|.|+++||+|+||.||+|+|+.+|..||||++.- .++.+.|..||.||+++..|+||++++.|+-. .++
T Consensus 33 EVFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV----~sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~-----sDL 103 (502)
T KOG0574|consen 33 EVFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPV----DTDLQEIIKEISIMQQCKSKYVVKYYGSYFKH-----SDL 103 (502)
T ss_pred HHHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCc----cchHHHHHHHHHHHHHcCCchhhhhhhhhccC-----Cce
Confidence 457889999999999999999999999999999863 46788999999999999999999999998544 489
Q ss_pred EEEEecCC-cCHHHHHHhC-CCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCCC
Q 007541 103 YVVFELME-SDLHQVIKAN-DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT 180 (599)
Q Consensus 103 ylV~E~~~-g~L~~~i~~~-~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~ 180 (599)
++|||||+ |++.++++.. ..|+++++..+++..|.||+|||...-+|||||.-|||+|.+|..||+|||.|.......
T Consensus 104 WIVMEYCGAGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTM 183 (502)
T KOG0574|consen 104 WIVMEYCGAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTM 183 (502)
T ss_pred EeehhhcCCCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEcccchhhhhhccccchhhhhH
Confidence 99999999 8999999864 589999999999999999999999999999999999999999999999999997653322
Q ss_pred CCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHhh
Q 007541 181 PTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVCL 260 (599)
Q Consensus 181 ~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~~ 260 (599)
. ...+.+||+.|||||++.. -.|+..+||||||++..||.-|++||.+-.....+ +-+--.|++
T Consensus 184 A---KRNTVIGTPFWMAPEVI~E--IGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAI---FMIPT~PPP-------- 247 (502)
T KOG0574|consen 184 A---KRNTVIGTPFWMAPEVIEE--IGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAI---FMIPTKPPP-------- 247 (502)
T ss_pred H---hhCccccCcccccHHHHHH--hccchhhhHhhhcchhhhhhcCCCCccccccccee---EeccCCCCC--------
Confidence 1 1246789999999999987 68999999999999999999999999764432221 111111211
Q ss_pred hhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHhcc
Q 007541 261 LLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLA 340 (599)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL~ 340 (599)
-.......|.++.||+++||.
T Consensus 248 -----------------------------------------------------------TF~KPE~WS~~F~DFi~~CLi 268 (502)
T KOG0574|consen 248 -----------------------------------------------------------TFKKPEEWSSEFNDFIRSCLI 268 (502)
T ss_pred -----------------------------------------------------------CCCChHhhhhHHHHHHHHHhc
Confidence 111223467789999999999
Q ss_pred cCCCCCCCHHHHhcCccccCc
Q 007541 341 FEPKDRPTAEEALADPYFKGL 361 (599)
Q Consensus 341 ~DP~~RpTa~e~L~HP~f~~~ 361 (599)
.+|++|-||.++++|||+++-
T Consensus 269 K~PE~R~TA~~L~~H~FiknA 289 (502)
T KOG0574|consen 269 KKPEERKTALRLCEHTFIKNA 289 (502)
T ss_pred CCHHHHHHHHHHhhhhhhcCC
Confidence 999999999999999999864
No 207
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=4.3e-40 Score=336.78 Aligned_cols=263 Identities=24% Similarity=0.412 Sum_probs=208.8
Q ss_pred cCCCCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhc-CCCCccccceeecCCCc-
Q 007541 19 YGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLL-RHPDIVEIKHILLPPSR- 96 (599)
Q Consensus 19 ~~~~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l-~HpnIv~l~~v~~~~s~- 96 (599)
....++|++.+.||.|+||.||+|.+..+++.||+|++... ......+..|+.+++.+ +|+||+++++++.....
T Consensus 12 ~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~---~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~ 88 (282)
T cd06636 12 RDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVT---EDEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPP 88 (282)
T ss_pred cChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecC---hHHHHHHHHHHHHHHHhcCCCcEEEEeeehhccccc
Confidence 45568999999999999999999999999999999998542 22345677899999888 69999999999864321
Q ss_pred CCCccEEEEEecCC-cCHHHHHHhC--CCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCcc
Q 007541 97 REFKDIYVVFELME-SDLHQVIKAN--DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLA 173 (599)
Q Consensus 97 ~~~~~iylV~E~~~-g~L~~~i~~~--~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA 173 (599)
.....+|+||||+. ++|.+++... ..+++..++.++.||+.||.|||+.||+|+||||+||+++.++.++|+|||++
T Consensus 89 ~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili~~~~~~~l~dfg~~ 168 (282)
T cd06636 89 GHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTENAEVKLVDFGVS 168 (282)
T ss_pred CCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCcch
Confidence 23457999999998 5999988763 35889999999999999999999999999999999999999999999999998
Q ss_pred ccccCCCCCcccccccccCccccCccccccc---cCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCC
Q 007541 174 RVAFNDTPTAIFWTDYVATRWYRAPELCGSF---FSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTP 250 (599)
Q Consensus 174 ~~~~~~~~~~~~~t~~~gt~~Y~APE~l~~~---~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p 250 (599)
........ .....+++..|+|||++... ...++.++|||||||++++|++|..||........+..+..
T Consensus 169 ~~~~~~~~---~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~~~~~----- 240 (282)
T cd06636 169 AQLDRTVG---RRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALFLIPR----- 240 (282)
T ss_pred hhhhcccc---CCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhhhHhh-----
Confidence 75432111 12345788999999987521 14688899999999999999999999975443222111100
Q ss_pred CHHHHHHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHH
Q 007541 251 SPEAIARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPL 330 (599)
Q Consensus 251 ~~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 330 (599)
...........+..
T Consensus 241 ------------------------------------------------------------------~~~~~~~~~~~~~~ 254 (282)
T cd06636 241 ------------------------------------------------------------------NPPPKLKSKKWSKK 254 (282)
T ss_pred ------------------------------------------------------------------CCCCCCcccccCHH
Confidence 00000111346788
Q ss_pred HHHHHHHhcccCCCCCCCHHHHhcCccc
Q 007541 331 ALRLLERMLAFEPKDRPTAEEALADPYF 358 (599)
Q Consensus 331 a~dLL~~mL~~DP~~RpTa~e~L~HP~f 358 (599)
+.+||.+||+.||.+|||+.|+|+||||
T Consensus 255 ~~~li~~cl~~~p~~Rp~~~ell~~~~~ 282 (282)
T cd06636 255 FIDFIEGCLVKNYLSRPSTEQLLKHPFI 282 (282)
T ss_pred HHHHHHHHhCCChhhCcCHHHHhcCCCC
Confidence 9999999999999999999999999997
No 208
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=3.3e-40 Score=332.99 Aligned_cols=254 Identities=27% Similarity=0.465 Sum_probs=209.6
Q ss_pred ceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCccc-ChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccE
Q 007541 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFE-HVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDI 102 (599)
Q Consensus 24 rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~-~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~i 102 (599)
+|++.+.||.|+||.||+|.+..+++.||+|++..... .......+.+|+.+++.++||||+++++.+. +..++
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~ 75 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQ-----DEENM 75 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhc-----CCCeE
Confidence 58999999999999999999999999999999975332 2234577889999999999999999999883 44579
Q ss_pred EEEEecCC-cCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCCCC
Q 007541 103 YVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTP 181 (599)
Q Consensus 103 ylV~E~~~-g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~~ 181 (599)
|+|+||+. ++|.+++.....+++..+..++.||++||.|||++||+|+||+|+||+++.++.++|+|||++.......
T Consensus 76 ~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~- 154 (258)
T cd05578 76 YLVVDLLLGGDLRYHLSQKVKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDT- 154 (258)
T ss_pred EEEEeCCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEcCCCCEEEeecccccccCCCc-
Confidence 99999998 5999999887789999999999999999999999999999999999999999999999999998654322
Q ss_pred CcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHhhh
Q 007541 182 TAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVCLL 261 (599)
Q Consensus 182 ~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~~~ 261 (599)
......++..|+|||++.. ..++.++|+||+||++++|++|..||...+.... ..+..
T Consensus 155 ---~~~~~~~~~~y~~PE~~~~--~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~-~~~~~---------------- 212 (258)
T cd05578 155 ---LTTSTSGTPGYMAPEVLCR--QGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIR-DQIRA---------------- 212 (258)
T ss_pred ---cccccCCChhhcCHHHHcc--cCCCCcccchhhHHHHHHHHhCCCCCCCCCccHH-HHHHH----------------
Confidence 1234467888999999876 5689999999999999999999999987653110 00000
Q ss_pred hhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHhccc
Q 007541 262 LNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAF 341 (599)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL~~ 341 (599)
.... .........+..+.+||.+||..
T Consensus 213 -------------------------------------------------~~~~----~~~~~~~~~~~~~~~~i~~~l~~ 239 (258)
T cd05578 213 -------------------------------------------------KQET----ADVLYPATWSTEAIDAINKLLER 239 (258)
T ss_pred -------------------------------------------------Hhcc----ccccCcccCcHHHHHHHHHHccC
Confidence 0000 00111234568899999999999
Q ss_pred CCCCCCCH--HHHhcCccc
Q 007541 342 EPKDRPTA--EEALADPYF 358 (599)
Q Consensus 342 DP~~RpTa--~e~L~HP~f 358 (599)
||.+|+++ .|+++||||
T Consensus 240 ~p~~R~~~~~~~l~~~~~~ 258 (258)
T cd05578 240 DPQKRLGDNLKDLKNHPYF 258 (258)
T ss_pred ChhHcCCccHHHHhcCCCC
Confidence 99999999 999999998
No 209
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=1.3e-39 Score=333.76 Aligned_cols=267 Identities=24% Similarity=0.417 Sum_probs=209.7
Q ss_pred ccccC-CCCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhc-CCCCccccceeecC
Q 007541 16 FTEYG-EGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLL-RHPDIVEIKHILLP 93 (599)
Q Consensus 16 ~~~~~-~~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l-~HpnIv~l~~v~~~ 93 (599)
++.+. ..++|++++.||+|+||+||+|.+..+++.||+|++.... .....+.+|+.+++.+ +|+||+++++++..
T Consensus 10 ~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~---~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 86 (286)
T cd06638 10 FDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH---DIDEEIEAEYNILKALSDHPNVVKFYGMYYK 86 (286)
T ss_pred eecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc---chHHHHHHHHHHHHHHhcCCCeeeeeeeeee
Confidence 45554 5789999999999999999999999999999999876421 2234567899999999 69999999998865
Q ss_pred CCcCCCccEEEEEecCC-cCHHHHHHh----CCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeee
Q 007541 94 PSRREFKDIYVVFELME-SDLHQVIKA----NDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKIC 168 (599)
Q Consensus 94 ~s~~~~~~iylV~E~~~-g~L~~~i~~----~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~ 168 (599)
....+...+|+||||++ ++|.+++.. ...+++..++.++.||+.||.|||+.+|+||||||+||+++.++.+||+
T Consensus 87 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~kl~ 166 (286)
T cd06638 87 KDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLTTEGGVKLV 166 (286)
T ss_pred cccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEECCCCCEEEc
Confidence 44345567999999998 589888753 3468999999999999999999999999999999999999999999999
Q ss_pred ccCccccccCCCCCcccccccccCccccCccccccc---cCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHH
Q 007541 169 DFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSF---FSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTD 245 (599)
Q Consensus 169 DFGlA~~~~~~~~~~~~~t~~~gt~~Y~APE~l~~~---~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~ 245 (599)
|||+++....... ......++..|+|||++... ...++.++||||+||++++|++|+.||.+.+....+..+..
T Consensus 167 dfg~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~~~~~~ 243 (286)
T cd06638 167 DFGVSAQLTSTRL---RRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRALFKIPR 243 (286)
T ss_pred cCCceeecccCCC---ccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHHhhccc
Confidence 9999976532211 12334688999999987531 14588999999999999999999999976543222111100
Q ss_pred hcCCCCHHHHHHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCC
Q 007541 246 LLGTPSPEAIARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFP 325 (599)
Q Consensus 246 ~lG~p~~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (599)
...... ....
T Consensus 244 ---------------------------------------------------------------------~~~~~~-~~~~ 253 (286)
T cd06638 244 ---------------------------------------------------------------------NPPPTL-HQPE 253 (286)
T ss_pred ---------------------------------------------------------------------cCCCcc-cCCC
Confidence 000000 0011
Q ss_pred CCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 007541 326 NANPLALRLLERMLAFEPKDRPTAEEALADPYF 358 (599)
Q Consensus 326 ~~s~~a~dLL~~mL~~DP~~RpTa~e~L~HP~f 358 (599)
..+..+.+||.+||+.||.+|||+.|+|+|+||
T Consensus 254 ~~~~~~~~li~~~l~~~p~~Rps~~ell~~~~~ 286 (286)
T cd06638 254 LWSNEFNDFIRKCLTKDYEKRPTVSDLLQHVFI 286 (286)
T ss_pred CcCHHHHHHHHHHccCCcccCCCHHHHhhcccC
Confidence 246679999999999999999999999999997
No 210
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=4.1e-40 Score=332.96 Aligned_cols=258 Identities=28% Similarity=0.477 Sum_probs=209.5
Q ss_pred CceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccE
Q 007541 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDI 102 (599)
Q Consensus 23 ~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~i 102 (599)
++|++.+.||.|+||.||+|.++.+++.||+|.+..... ......+.+|+.+++.++||||+++++++... ..+
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-----~~~ 74 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEIN-EAIQKQILRELDILHKCNSPYIVGFYGAFYNN-----GDI 74 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccC-hHHHHHHHHHHHHHHHCCCCchhhhheeeecC-----CEE
Confidence 468889999999999999999999999999999875432 24456788999999999999999999998543 579
Q ss_pred EEEEecCC-cCHHHHHHhC-CCCCHHHHHHHHHHHHhhhhhccc-CceEeecCCCCcEEeCCCCceeeeccCccccccCC
Q 007541 103 YVVFELME-SDLHQVIKAN-DDLTPEHYQFFLYQLLRGLKYIHT-ANVFHRDLKPKNILANADCKLKICDFGLARVAFND 179 (599)
Q Consensus 103 ylV~E~~~-g~L~~~i~~~-~~lse~~i~~i~~QLl~aL~yLHs-~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~ 179 (599)
|+|+||+. ++|.+++... ..+++..+..++.||+.||.|||+ .|++|+||||+||+++.++.+||+|||.+......
T Consensus 75 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~ 154 (265)
T cd06605 75 SICMEYMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNS 154 (265)
T ss_pred EEEEEecCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEECCCCCEEEeecccchhhHHH
Confidence 99999999 6999999876 689999999999999999999999 99999999999999999999999999998765322
Q ss_pred CCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCCh--hhHHHHHHHhcCCCCHHHHHH
Q 007541 180 TPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNV--VHQLDIMTDLLGTPSPEAIAR 257 (599)
Q Consensus 180 ~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~--~~~l~~I~~~lG~p~~e~i~~ 257 (599)
.. ....++..|+|||.+.+ ..++.++||||+||++++|++|+.||...+. ......+..
T Consensus 155 ~~-----~~~~~~~~y~~PE~~~~--~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~------------ 215 (265)
T cd06605 155 LA-----KTFVGTSSYMAPERIQG--NDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQY------------ 215 (265)
T ss_pred Hh-----hcccCChhccCHHHHcC--CCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHH------------
Confidence 11 11567888999999877 6889999999999999999999999965431 000111100
Q ss_pred HhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHH
Q 007541 258 VCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLER 337 (599)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~ 337 (599)
+.......+. ....++.+.+||.+
T Consensus 216 ------------------------------------------------------~~~~~~~~~~--~~~~~~~~~~li~~ 239 (265)
T cd06605 216 ------------------------------------------------------IVNEPPPRLP--SGKFSPDFQDFVNL 239 (265)
T ss_pred ------------------------------------------------------HhcCCCCCCC--hhhcCHHHHHHHHH
Confidence 0000000000 01167889999999
Q ss_pred hcccCCCCCCCHHHHhcCccccCc
Q 007541 338 MLAFEPKDRPTAEEALADPYFKGL 361 (599)
Q Consensus 338 mL~~DP~~RpTa~e~L~HP~f~~~ 361 (599)
||..||++|||+.|+|.||||+.+
T Consensus 240 ~l~~~p~~Rpt~~~ll~~~~~~~~ 263 (265)
T cd06605 240 CLIKDPRERPSYKELLEHPFIKKY 263 (265)
T ss_pred HcCCCchhCcCHHHHhhCchhhcc
Confidence 999999999999999999999875
No 211
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=1.2e-39 Score=328.93 Aligned_cols=261 Identities=31% Similarity=0.473 Sum_probs=210.6
Q ss_pred ceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEE
Q 007541 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIY 103 (599)
Q Consensus 24 rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~iy 103 (599)
||++.+.||+|+||.||+|.+..+++.||+|+++...........+.+|+.+++.++|+||+++++++.. ...++
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~-----~~~~~ 75 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVH-----REKVY 75 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEec-----CCEEE
Confidence 7999999999999999999999999999999997654444466788999999999999999999998743 34799
Q ss_pred EEEecCC-cCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCCCCC
Q 007541 104 VVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPT 182 (599)
Q Consensus 104 lV~E~~~-g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~~~ 182 (599)
+|+||+. ++|.+++.....+++..++.++.||+.||.|||+.||+|+||+|+||+++.++.+||+|||++.........
T Consensus 76 lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~ 155 (264)
T cd06626 76 IFMEYCSGGTLEELLEHGRILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTT 155 (264)
T ss_pred EEEecCCCCcHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEcccccccccCCCCCc
Confidence 9999998 699999988777999999999999999999999999999999999999999999999999999875433222
Q ss_pred ccc-ccccccCccccCcccccccc-CCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHhh
Q 007541 183 AIF-WTDYVATRWYRAPELCGSFF-SKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVCL 260 (599)
Q Consensus 183 ~~~-~t~~~gt~~Y~APE~l~~~~-~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~~ 260 (599)
... .....++..|+|||++.+.. ..++.++||||+||++++|++|+.||.+.+........... +
T Consensus 156 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~~~~~-~------------ 222 (264)
T cd06626 156 MGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFHVGA-G------------ 222 (264)
T ss_pred ccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHHHHHhc-C------------
Confidence 111 22356788999999987621 23788999999999999999999999754321111100000 0
Q ss_pred hhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHhcc
Q 007541 261 LLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLA 340 (599)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL~ 340 (599)
..+........++.+.+||.+||+
T Consensus 223 --------------------------------------------------------~~~~~~~~~~~~~~~~~li~~~l~ 246 (264)
T cd06626 223 --------------------------------------------------------HKPPIPDSLQLSPEGKDFLDRCLE 246 (264)
T ss_pred --------------------------------------------------------CCCCCCcccccCHHHHHHHHHHcc
Confidence 000011122357889999999999
Q ss_pred cCCCCCCCHHHHhcCccc
Q 007541 341 FEPKDRPTAEEALADPYF 358 (599)
Q Consensus 341 ~DP~~RpTa~e~L~HP~f 358 (599)
.||.+|||+.|++.|||+
T Consensus 247 ~~p~~R~~~~~i~~~~~~ 264 (264)
T cd06626 247 SDPKKRPTASELLQHPFV 264 (264)
T ss_pred CCcccCCCHHHHhcCCCC
Confidence 999999999999999996
No 212
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=1e-39 Score=334.37 Aligned_cols=258 Identities=23% Similarity=0.356 Sum_probs=207.2
Q ss_pred ceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEE
Q 007541 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIY 103 (599)
Q Consensus 24 rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~iy 103 (599)
-|++.+.||+|+||.||+|.+..++..+|+|.+... .......+.+|+.+++.++|+||+++++++... ...|
T Consensus 6 ~~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~-----~~~~ 78 (282)
T cd06643 6 FWEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTK--SEEELEDYMVEIDILASCDHPNIVKLLDAFYYE-----NNLW 78 (282)
T ss_pred HHHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCC--CHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeC-----CEEE
Confidence 378899999999999999999999999999998642 234456788999999999999999999998543 4789
Q ss_pred EEEecCC-cCHHHHHHh-CCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCCCC
Q 007541 104 VVFELME-SDLHQVIKA-NDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTP 181 (599)
Q Consensus 104 lV~E~~~-g~L~~~i~~-~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~~ 181 (599)
+|+||+. ++|..++.. ...+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||++........
T Consensus 79 ~v~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~ 158 (282)
T cd06643 79 ILIEFCAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQ 158 (282)
T ss_pred EEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEccCCCEEEcccccccccccccc
Confidence 9999998 578777754 45799999999999999999999999999999999999999999999999999976432211
Q ss_pred CcccccccccCccccCcccccc---ccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHH
Q 007541 182 TAIFWTDYVATRWYRAPELCGS---FFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARV 258 (599)
Q Consensus 182 ~~~~~t~~~gt~~Y~APE~l~~---~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~ 258 (599)
......++..|+|||++.. ....++.++||||+||++++|++|++||...+.......+....
T Consensus 159 ---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~----------- 224 (282)
T cd06643 159 ---RRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSE----------- 224 (282)
T ss_pred ---ccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHHHHHHhhcC-----------
Confidence 1234568889999998742 11457889999999999999999999998765433322221100
Q ss_pred hhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHh
Q 007541 259 CLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERM 338 (599)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~m 338 (599)
+... .....++..+.+||.+|
T Consensus 225 ----------------------------------------------------------~~~~-~~~~~~~~~~~~li~~~ 245 (282)
T cd06643 225 ----------------------------------------------------------PPTL-AQPSRWSSEFKDFLKKC 245 (282)
T ss_pred ----------------------------------------------------------CCCC-CCccccCHHHHHHHHHH
Confidence 0000 01123567899999999
Q ss_pred cccCCCCCCCHHHHhcCccccCc
Q 007541 339 LAFEPKDRPTAEEALADPYFKGL 361 (599)
Q Consensus 339 L~~DP~~RpTa~e~L~HP~f~~~ 361 (599)
|..||.+|||++++|+||||...
T Consensus 246 l~~~p~~Rp~~~~il~~~~~~~~ 268 (282)
T cd06643 246 LEKNVDARWTTTQLLQHPFVTVN 268 (282)
T ss_pred ccCChhhCcCHHHHhcCCCEecc
Confidence 99999999999999999999854
No 213
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=1.9e-39 Score=330.03 Aligned_cols=262 Identities=27% Similarity=0.483 Sum_probs=207.7
Q ss_pred ceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccCh--------hhHHHHHHHHHHHHhcCCCCccccceeecCCC
Q 007541 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHV--------SDATRILREIKLLRLLRHPDIVEIKHILLPPS 95 (599)
Q Consensus 24 rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~--------~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s 95 (599)
+|.+.+.||.|++|.||+|.+..+|+.||||.+....... ...+.+.+|+.+++.++|+||+++++++..
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-- 79 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETT-- 79 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEecc--
Confidence 6899999999999999999999999999999885321111 113457789999999999999999998843
Q ss_pred cCCCccEEEEEecCC-cCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccc
Q 007541 96 RREFKDIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLAR 174 (599)
Q Consensus 96 ~~~~~~iylV~E~~~-g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~ 174 (599)
...+++||||+. ++|.+++...+.+++..++.++.||+.||.|||++|++||||+|+||+++.++.+||+|||+++
T Consensus 80 ---~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~~~~~~~~l~d~~~~~ 156 (272)
T cd06629 80 ---EEYLSIFLEYVPGGSIGSCLRTYGRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVDADGICKISDFGISK 156 (272)
T ss_pred ---CCceEEEEecCCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEEcCCCeEEEeeccccc
Confidence 357999999998 6999999888889999999999999999999999999999999999999999999999999997
Q ss_pred cccCCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHH
Q 007541 175 VAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEA 254 (599)
Q Consensus 175 ~~~~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~ 254 (599)
....... ........++..|+|||.+......++.++|+|||||++++|++|..||...+....+..+..
T Consensus 157 ~~~~~~~-~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~--------- 226 (272)
T cd06629 157 KSDDIYD-NDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGN--------- 226 (272)
T ss_pred ccccccc-ccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHHHHhhc---------
Confidence 6432211 111234567889999999865323488999999999999999999999965443221111100
Q ss_pred HHHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHH
Q 007541 255 IARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRL 334 (599)
Q Consensus 255 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dL 334 (599)
............+.++..+.+|
T Consensus 227 ----------------------------------------------------------~~~~~~~~~~~~~~~~~~~~~l 248 (272)
T cd06629 227 ----------------------------------------------------------KRSAPPIPPDVSMNLSPVALDF 248 (272)
T ss_pred ----------------------------------------------------------cccCCcCCccccccCCHHHHHH
Confidence 0000001112234568899999
Q ss_pred HHHhcccCCCCCCCHHHHhcCccc
Q 007541 335 LERMLAFEPKDRPTAEEALADPYF 358 (599)
Q Consensus 335 L~~mL~~DP~~RpTa~e~L~HP~f 358 (599)
|.+||..||.+|||++|+|+||||
T Consensus 249 i~~~l~~~p~~Rps~~~il~~~~~ 272 (272)
T cd06629 249 LNACFTINPDNRPTARELLQHPFI 272 (272)
T ss_pred HHHHhcCChhhCCCHHHHhhCCCC
Confidence 999999999999999999999997
No 214
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=1.4e-39 Score=327.09 Aligned_cols=254 Identities=28% Similarity=0.485 Sum_probs=208.2
Q ss_pred ceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccC---hhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCc
Q 007541 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEH---VSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFK 100 (599)
Q Consensus 24 rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~---~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~ 100 (599)
||+..+.||+|++|+||+|.+..+++.||||.+...... ......+.+|+.+++.++|+||+++++++.. ..
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-----~~ 75 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTERE-----ED 75 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEec-----CC
Confidence 688899999999999999999999999999998643211 2245678899999999999999999998843 35
Q ss_pred cEEEEEecCC-cCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCC
Q 007541 101 DIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFND 179 (599)
Q Consensus 101 ~iylV~E~~~-g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~ 179 (599)
.+|+|+||++ ++|.+++...+.+++..+..++.||+.||+|||+.||+|+||+|+||+++.++.+||+|||++......
T Consensus 76 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~ 155 (258)
T cd06632 76 NLYIFLELVPGGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVDTNGVVKLADFGMAKQVVEF 155 (258)
T ss_pred eEEEEEEecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccceecccc
Confidence 7999999998 599999988878999999999999999999999999999999999999999999999999999765332
Q ss_pred CCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHh
Q 007541 180 TPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVC 259 (599)
Q Consensus 180 ~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~ 259 (599)
. ......++..|+|||.+... ..++.++|+||+||++++|++|+.||...........+...
T Consensus 156 ~----~~~~~~~~~~y~~pe~~~~~-~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~------------- 217 (258)
T cd06632 156 S----FAKSFKGSPYWMAPEVIAQQ-GGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFKIGRS------------- 217 (258)
T ss_pred c----cccccCCCcceeCHHHhcCC-CCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHHHHHHHhc-------------
Confidence 2 12345688999999988652 23889999999999999999999999765432221111100
Q ss_pred hhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHhc
Q 007541 260 LLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERML 339 (599)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL 339 (599)
.......+..++.+.+||.+||
T Consensus 218 ----------------------------------------------------------~~~~~~~~~~~~~~~~li~~~l 239 (258)
T cd06632 218 ----------------------------------------------------------KELPPIPDHLSDEAKDFILKCL 239 (258)
T ss_pred ----------------------------------------------------------ccCCCcCCCcCHHHHHHHHHHh
Confidence 0011122356788999999999
Q ss_pred ccCCCCCCCHHHHhcCccc
Q 007541 340 AFEPKDRPTAEEALADPYF 358 (599)
Q Consensus 340 ~~DP~~RpTa~e~L~HP~f 358 (599)
+.||.+|||+.++|.||||
T Consensus 240 ~~~p~~Rp~~~~~l~~~~~ 258 (258)
T cd06632 240 QRDPSLRPTAAELLEHPFV 258 (258)
T ss_pred hcCcccCcCHHHHhcCCCC
Confidence 9999999999999999996
No 215
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-41 Score=353.17 Aligned_cols=261 Identities=28% Similarity=0.540 Sum_probs=217.7
Q ss_pred cCCCCceEEE--EEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCc
Q 007541 19 YGEGSRYKIE--EVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSR 96 (599)
Q Consensus 19 ~~~~~rY~i~--~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~ 96 (599)
..+..-|+|. ++||+|-||+||-|.++++|+.||||+|.+..-.......+.+|+.||+.+.||.||.|.-.|.++
T Consensus 558 vd~stvYQif~devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~-- 635 (888)
T KOG4236|consen 558 VDISTVYQIFADEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETP-- 635 (888)
T ss_pred hhHHHHHHhhhHhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCC--
Confidence 3445567764 899999999999999999999999999976433334456777999999999999999999888554
Q ss_pred CCCccEEEEEecCCcCHHHHHHh--CCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCC---CceeeeccC
Q 007541 97 REFKDIYVVFELMESDLHQVIKA--NDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANAD---CKLKICDFG 171 (599)
Q Consensus 97 ~~~~~iylV~E~~~g~L~~~i~~--~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~---~~lKL~DFG 171 (599)
..+++|||-+.||+.+.|.+ .++|++...++++-|||.||+|||-+||+|+||||+|||+.+. -++||||||
T Consensus 636 ---ervFVVMEKl~GDMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFG 712 (888)
T KOG4236|consen 636 ---ERVFVVMEKLHGDMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFG 712 (888)
T ss_pred ---ceEEEEehhhcchHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCCCCCceeecccc
Confidence 46999999999999988865 4689999999999999999999999999999999999999875 459999999
Q ss_pred ccccccCCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCC
Q 007541 172 LARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPS 251 (599)
Q Consensus 172 lA~~~~~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~ 251 (599)
.||.+.+.. +....+||+.|.|||++.. ..|+..-||||+|+|+|.-|.|.-||..+.+.+ ++|.+....-
T Consensus 713 fARiIgEks----FRrsVVGTPAYLaPEVLrn--kGyNrSLDMWSVGVIiYVsLSGTFPFNEdEdIn--dQIQNAaFMy- 783 (888)
T KOG4236|consen 713 FARIIGEKS----FRRSVVGTPAYLAPEVLRN--KGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDIN--DQIQNAAFMY- 783 (888)
T ss_pred ceeecchhh----hhhhhcCCccccCHHHHhh--ccccccccceeeeEEEEEEecccccCCCccchh--HHhhcccccc-
Confidence 999975433 3467899999999999987 789999999999999999999999986544322 2222211111
Q ss_pred HHHHHHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHH
Q 007541 252 PEAIARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLA 331 (599)
Q Consensus 252 ~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a 331 (599)
. ...|..+++.|
T Consensus 784 ----------------------------------------------------------------P----p~PW~eis~~A 795 (888)
T KOG4236|consen 784 ----------------------------------------------------------------P----PNPWSEISPEA 795 (888)
T ss_pred ----------------------------------------------------------------C----CCchhhcCHHH
Confidence 1 12345678999
Q ss_pred HHHHHHhcccCCCCCCCHHHHhcCccccCc
Q 007541 332 LRLLERMLAFEPKDRPTAEEALADPYFKGL 361 (599)
Q Consensus 332 ~dLL~~mL~~DP~~RpTa~e~L~HP~f~~~ 361 (599)
+|||..+|+..=.+|.|++..|.|||+++.
T Consensus 796 idlIn~LLqVkm~kRysvdk~lsh~Wlq~y 825 (888)
T KOG4236|consen 796 IDLINNLLQVKMRKRYSVDKSLSHPWLQDY 825 (888)
T ss_pred HHHHHHHHHHHHHHhcchHhhccchhhhcc
Confidence 999999999999999999999999999975
No 216
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=5.7e-40 Score=339.22 Aligned_cols=262 Identities=27% Similarity=0.486 Sum_probs=211.9
Q ss_pred CCCCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCC
Q 007541 20 GEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREF 99 (599)
Q Consensus 20 ~~~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~ 99 (599)
+..+.|.....||+|+||.||++.+..++..||||++... .......+.+|+.+++.++|+||+++++.+.. .
T Consensus 19 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~-----~ 91 (292)
T cd06658 19 DPREYLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLR--KQQRRELLFNEVVIMRDYHHENVVDMYNSYLV-----G 91 (292)
T ss_pred chHHHHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecc--hHHHHHHHHHHHHHHHhCCCCcHHHHHHheec-----C
Confidence 3446777788899999999999999999999999998642 23345668899999999999999999998843 3
Q ss_pred ccEEEEEecCCc-CHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccC
Q 007541 100 KDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFN 178 (599)
Q Consensus 100 ~~iylV~E~~~g-~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~ 178 (599)
...|+||||+++ +|.+++.. +.+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++.....
T Consensus 92 ~~~~lv~e~~~~~~L~~~~~~-~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~ 170 (292)
T cd06658 92 DELWVVMEFLEGGALTDIVTH-TRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSK 170 (292)
T ss_pred CeEEEEEeCCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEccCcchhhccc
Confidence 578999999985 78887754 4699999999999999999999999999999999999999999999999999975432
Q ss_pred CCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHH
Q 007541 179 DTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARV 258 (599)
Q Consensus 179 ~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~ 258 (599)
... ......++..|+|||.+.+ ..++.++||||+||++++|++|+.||.+.+....+..+...+..
T Consensus 171 ~~~---~~~~~~~~~~y~aPE~~~~--~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~--------- 236 (292)
T cd06658 171 EVP---KRKSLVGTPYWMAPEVISR--LPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDNLPP--------- 236 (292)
T ss_pred ccc---cCceeecCccccCHHHHcc--CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCC---------
Confidence 221 1234578999999999876 67889999999999999999999999876544333222111000
Q ss_pred hhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHh
Q 007541 259 CLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERM 338 (599)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~m 338 (599)
........+..+.+||.+|
T Consensus 237 -------------------------------------------------------------~~~~~~~~~~~~~~li~~~ 255 (292)
T cd06658 237 -------------------------------------------------------------RVKDSHKVSSVLRGFLDLM 255 (292)
T ss_pred -------------------------------------------------------------ccccccccCHHHHHHHHHH
Confidence 0001124577899999999
Q ss_pred cccCCCCCCCHHHHhcCccccCcccC
Q 007541 339 LAFEPKDRPTAEEALADPYFKGLAKV 364 (599)
Q Consensus 339 L~~DP~~RpTa~e~L~HP~f~~~~~~ 364 (599)
|..||.+|||++|+|+||||.....+
T Consensus 256 l~~~P~~Rpt~~~il~~~~~~~~~~~ 281 (292)
T cd06658 256 LVREPSQRATAQELLQHPFLKLAGPP 281 (292)
T ss_pred ccCChhHCcCHHHHhhChhhhccCCc
Confidence 99999999999999999999976543
No 217
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=1.2e-39 Score=327.51 Aligned_cols=253 Identities=30% Similarity=0.523 Sum_probs=207.7
Q ss_pred CCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCcc
Q 007541 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKD 101 (599)
Q Consensus 22 ~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~ 101 (599)
.++|++.+.||+|+||.||+|.+..++..||+|.+... .....+.+|+.+++.++|+||+++++.+... ..
T Consensus 2 ~~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~----~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~-----~~ 72 (256)
T cd06612 2 EEVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVE----EDLQEIIKEISILKQCDSPYIVKYYGSYFKN-----TD 72 (256)
T ss_pred cccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecH----HHHHHHHHHHHHHHhCCCCcEeeeeeeeecC-----Cc
Confidence 36899999999999999999999999999999998642 2266788999999999999999999998543 57
Q ss_pred EEEEEecCC-cCHHHHHHh-CCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCC
Q 007541 102 IYVVFELME-SDLHQVIKA-NDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFND 179 (599)
Q Consensus 102 iylV~E~~~-g~L~~~i~~-~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~ 179 (599)
+|+|+||+. ++|.+++.. ...+++..++.++.||+.||.|||+.||+|+||+|+||+++.++.+||+|||++......
T Consensus 73 ~~l~~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~ 152 (256)
T cd06612 73 LWIVMEYCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDT 152 (256)
T ss_pred EEEEEecCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEECCCCcEEEcccccchhcccC
Confidence 999999999 589999875 457899999999999999999999999999999999999999999999999999865432
Q ss_pred CCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHh
Q 007541 180 TPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVC 259 (599)
Q Consensus 180 ~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~ 259 (599)
... .....++..|+|||++.+ ..++.++||||+|||+++|++|+.||...+.......+..
T Consensus 153 ~~~---~~~~~~~~~y~~PE~~~~--~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~~~-------------- 213 (256)
T cd06612 153 MAK---RNTVIGTPFWMAPEVIQE--IGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIPN-------------- 213 (256)
T ss_pred ccc---cccccCCccccCHHHHhc--CCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhhcc--------------
Confidence 211 123457888999999876 5789999999999999999999999976543322111100
Q ss_pred hhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHhc
Q 007541 260 LLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERML 339 (599)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL 339 (599)
. ...........+..+.+||.+||
T Consensus 214 -------------------------------------------------------~-~~~~~~~~~~~~~~~~~~i~~~l 237 (256)
T cd06612 214 -------------------------------------------------------K-PPPTLSDPEKWSPEFNDFVKKCL 237 (256)
T ss_pred -------------------------------------------------------C-CCCCCCchhhcCHHHHHHHHHHH
Confidence 0 00000111245678999999999
Q ss_pred ccCCCCCCCHHHHhcCccc
Q 007541 340 AFEPKDRPTAEEALADPYF 358 (599)
Q Consensus 340 ~~DP~~RpTa~e~L~HP~f 358 (599)
+.||.+|||+.|+|+||||
T Consensus 238 ~~~P~~Rps~~~il~~~~~ 256 (256)
T cd06612 238 VKDPEERPSAIQLLQHPFI 256 (256)
T ss_pred hcChhhCcCHHHHhcCCCC
Confidence 9999999999999999997
No 218
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=3e-39 Score=325.82 Aligned_cols=259 Identities=31% Similarity=0.474 Sum_probs=213.1
Q ss_pred CceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccE
Q 007541 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDI 102 (599)
Q Consensus 23 ~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~i 102 (599)
+.|++.+.||.|++|.||+|.+..+++.||||++...... .....+.+|+..++.++|+||+++++++... ..+
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-----~~~ 74 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDE-EFRKQLLRELKTLRSCESPYVVKCYGAFYKE-----GEI 74 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcch-HHHHHHHHHHHHHHhcCCCCeeeEEEEEccC-----CeE
Confidence 4689999999999999999999999999999998753322 4456788999999999999999999998543 579
Q ss_pred EEEEecCC-cCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhccc-CceEeecCCCCcEEeCCCCceeeeccCccccccCCC
Q 007541 103 YVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHT-ANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT 180 (599)
Q Consensus 103 ylV~E~~~-g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs-~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~ 180 (599)
|+||||++ ++|.+++.....+++..+..++.||++||.|||+ .|++|+||+|+||+++.++.++|+|||++.......
T Consensus 75 ~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~ 154 (264)
T cd06623 75 SIVLEYMDGGSLADLLKKVGKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLINSKGEVKIADFGISKVLENTL 154 (264)
T ss_pred EEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEECCCCCEEEccCccceecccCC
Confidence 99999999 6999999887889999999999999999999999 999999999999999999999999999998654322
Q ss_pred CCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHhh
Q 007541 181 PTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVCL 260 (599)
Q Consensus 181 ~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~~ 260 (599)
.. .....++..|+|||.+.. ..++.++|+|||||++|+|++|+.||...+.....+.+..
T Consensus 155 ~~---~~~~~~~~~y~~pE~~~~--~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~--------------- 214 (264)
T cd06623 155 DQ---CNTFVGTVTYMSPERIQG--ESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQA--------------- 214 (264)
T ss_pred Cc---ccceeecccccCHhhhCC--CCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHH---------------
Confidence 21 124567889999999876 5788999999999999999999999976542111111110
Q ss_pred hhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCC-CCHHHHHHHHHhc
Q 007541 261 LLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPN-ANPLALRLLERML 339 (599)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~s~~a~dLL~~mL 339 (599)
+..... ...... .+..+.+||.+||
T Consensus 215 ---------------------------------------------------~~~~~~---~~~~~~~~~~~l~~li~~~l 240 (264)
T cd06623 215 ---------------------------------------------------ICDGPP---PSLPAEEFSPEFRDFISACL 240 (264)
T ss_pred ---------------------------------------------------HhcCCC---CCCCcccCCHHHHHHHHHHc
Confidence 000000 111123 6788999999999
Q ss_pred ccCCCCCCCHHHHhcCccccCc
Q 007541 340 AFEPKDRPTAEEALADPYFKGL 361 (599)
Q Consensus 340 ~~DP~~RpTa~e~L~HP~f~~~ 361 (599)
..+|++|||+.|+|+||||+..
T Consensus 241 ~~~p~~R~~~~~ll~~~~~~~~ 262 (264)
T cd06623 241 QKDPKKRPSAAELLQHPFIKKA 262 (264)
T ss_pred cCChhhCCCHHHHHhCHHHHhc
Confidence 9999999999999999999865
No 219
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=1.1e-39 Score=334.91 Aligned_cols=262 Identities=26% Similarity=0.436 Sum_probs=204.4
Q ss_pred CceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcC-CCCccccceeecCCCcCCCcc
Q 007541 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLR-HPDIVEIKHILLPPSRREFKD 101 (599)
Q Consensus 23 ~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~-HpnIv~l~~v~~~~s~~~~~~ 101 (599)
+.|+..+.||+|+||.||++.+..+++.||||++...... .....+.+|+.++..+. |+||+++++++..+ ..
T Consensus 4 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~-----~~ 77 (288)
T cd06616 4 EDLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDE-KEQKRLLMDLDVVMRSSDCPYIVKFYGALFRE-----GD 77 (288)
T ss_pred HHhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccCh-HHHHHHHHHHHHHHHhcCCCCEeeeeeEEecC-----Cc
Confidence 3566778999999999999999999999999998743222 34567889999999996 99999999988543 46
Q ss_pred EEEEEecCCcCHHHHHH-----hCCCCCHHHHHHHHHHHHhhhhhcccC-ceEeecCCCCcEEeCCCCceeeeccCcccc
Q 007541 102 IYVVFELMESDLHQVIK-----ANDDLTPEHYQFFLYQLLRGLKYIHTA-NVFHRDLKPKNILANADCKLKICDFGLARV 175 (599)
Q Consensus 102 iylV~E~~~g~L~~~i~-----~~~~lse~~i~~i~~QLl~aL~yLHs~-gIvHrDLKP~NILv~~~~~lKL~DFGlA~~ 175 (599)
.++||||+..+|.++.. ....+++..+..++.|++.||+|||+. ||+||||||+|||++.++.+||+|||+++.
T Consensus 78 ~~~~~e~~~~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~ 157 (288)
T cd06616 78 CWICMELMDISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLDRNGNIKLCDFGISGQ 157 (288)
T ss_pred EEEEEecccCCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEccCCcEEEeecchhHH
Confidence 89999999976655432 235799999999999999999999975 999999999999999999999999999976
Q ss_pred ccCCCCCcccccccccCccccCcccccccc-CCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHH
Q 007541 176 AFNDTPTAIFWTDYVATRWYRAPELCGSFF-SKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEA 254 (599)
Q Consensus 176 ~~~~~~~~~~~t~~~gt~~Y~APE~l~~~~-~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~ 254 (599)
...... .....++..|+|||++.... ..++.++||||+||++++|++|+.||...+. ....+......
T Consensus 158 ~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~--~~~~~~~~~~~----- 226 (288)
T cd06616 158 LVDSIA----KTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNS--VFDQLTQVVKG----- 226 (288)
T ss_pred hccCCc----cccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcch--HHHHHhhhcCC-----
Confidence 533221 12336788899999986521 2688999999999999999999999975431 11111111100
Q ss_pred HHHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHH
Q 007541 255 IARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRL 334 (599)
Q Consensus 255 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dL 334 (599)
..+.........++..+.+|
T Consensus 227 ------------------------------------------------------------~~~~~~~~~~~~~~~~l~~l 246 (288)
T cd06616 227 ------------------------------------------------------------DPPILSNSEEREFSPSFVNF 246 (288)
T ss_pred ------------------------------------------------------------CCCcCCCcCCCccCHHHHHH
Confidence 00000111123478889999
Q ss_pred HHHhcccCCCCCCCHHHHhcCccccCc
Q 007541 335 LERMLAFEPKDRPTAEEALADPYFKGL 361 (599)
Q Consensus 335 L~~mL~~DP~~RpTa~e~L~HP~f~~~ 361 (599)
|.+||+.||.+|||++++++||||+..
T Consensus 247 i~~~l~~~p~~Rpt~~~i~~~~~~~~~ 273 (288)
T cd06616 247 INLCLIKDESKRPKYKELLEHPFIKDY 273 (288)
T ss_pred HHHHccCChhhCcCHHHHhcChhhhch
Confidence 999999999999999999999999864
No 220
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=1.8e-39 Score=328.27 Aligned_cols=249 Identities=23% Similarity=0.393 Sum_probs=204.9
Q ss_pred EeecCceEEEEEEECCCCcEEEEEEecCccc-ChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEEEEEecC
Q 007541 31 IGKGSYGVVCSAYDTRTGEKVAIKKINDIFE-HVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVVFELM 109 (599)
Q Consensus 31 LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~-~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~iylV~E~~ 109 (599)
||.|++|.||+|.+..+++.||+|++..... .......+.+|+.+++.++||||+++++.+.. ...+|+|+||+
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~~lv~e~~ 75 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKD-----KKYIYMLMEYC 75 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEc-----CCccEEEEecC
Confidence 6899999999999999999999999975332 22345678899999999999999999998843 35799999999
Q ss_pred C-cCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCCCCCcccccc
Q 007541 110 E-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTD 188 (599)
Q Consensus 110 ~-g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~~~~~~~t~ 188 (599)
+ ++|.+++.....+++..+..++.||+.||+|||++|++|+||||+||+++.++.+||+|||++....... ....
T Consensus 76 ~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~----~~~~ 151 (262)
T cd05572 76 LGGELWTILRDRGLFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ----KTWT 151 (262)
T ss_pred CCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEcCCCCEEEeeCCcccccCccc----cccc
Confidence 8 6999999888789999999999999999999999999999999999999999999999999998764332 1133
Q ss_pred cccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCC--hhhHHHHHHHhcCCCCHHHHHHHhhhhhhhh
Q 007541 189 YVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKN--VVHQLDIMTDLLGTPSPEAIARVCLLLNIIW 266 (599)
Q Consensus 189 ~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~--~~~~l~~I~~~lG~p~~e~i~~~~~~~~~~~ 266 (599)
..++..|++||.+.. ..++.++|+||+||++|+|++|..||.... ....+..+...
T Consensus 152 ~~~~~~~~~PE~~~~--~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-------------------- 209 (262)
T cd05572 152 FCGTPEYVAPEIILN--KGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILKG-------------------- 209 (262)
T ss_pred ccCCcCccChhHhcC--CCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHHhcc--------------------
Confidence 468889999999866 578899999999999999999999997655 22211111100
Q ss_pred cCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCC
Q 007541 267 CGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDR 346 (599)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL~~DP~~R 346 (599)
..... .....++.+.+||.+||..||.+|
T Consensus 210 ------------------------------------------------~~~~~---~~~~~~~~~~~~i~~~l~~~p~~R 238 (262)
T cd05572 210 ------------------------------------------------NGKLE---FPNYIDKAAKDLIKQLLRRNPEER 238 (262)
T ss_pred ------------------------------------------------CCCCC---CCcccCHHHHHHHHHHccCChhhC
Confidence 00000 112246789999999999999999
Q ss_pred CC-----HHHHhcCccccCc
Q 007541 347 PT-----AEEALADPYFKGL 361 (599)
Q Consensus 347 pT-----a~e~L~HP~f~~~ 361 (599)
+| ++|+++||||+++
T Consensus 239 ~~~~~~~~~~l~~~~~~~~~ 258 (262)
T cd05572 239 LGNLKGGIKDIKKHKWFNGF 258 (262)
T ss_pred cCCcccCHHHHhcChhhhCC
Confidence 99 9999999999976
No 221
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=4.9e-39 Score=323.29 Aligned_cols=253 Identities=29% Similarity=0.491 Sum_probs=207.2
Q ss_pred ceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEE
Q 007541 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIY 103 (599)
Q Consensus 24 rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~iy 103 (599)
+|.+.+.||+|+||.||++.++.+|..||+|.+............+.+|+.+++.++|+||+++++.+.. ...+|
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~-----~~~~~ 75 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQE-----NGRLF 75 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheecc-----CCeEE
Confidence 6899999999999999999999999999999986533333345567899999999999999999998843 35799
Q ss_pred EEEecCC-cCHHHHHHhCC--CCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCc-eeeeccCccccccCC
Q 007541 104 VVFELME-SDLHQVIKAND--DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCK-LKICDFGLARVAFND 179 (599)
Q Consensus 104 lV~E~~~-g~L~~~i~~~~--~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~-lKL~DFGlA~~~~~~ 179 (599)
+|+||+. ++|.+++.... .+++..+..++.||+.||.|||+.+|+|+||||+||+++.++. +||+|||.+......
T Consensus 76 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~ 155 (257)
T cd08225 76 IVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDS 155 (257)
T ss_pred EEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEcCCCCeEEecccccchhccCC
Confidence 9999998 59999987643 5799999999999999999999999999999999999998864 699999999765432
Q ss_pred CCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHh
Q 007541 180 TPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVC 259 (599)
Q Consensus 180 ~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~ 259 (599)
... .....++..|+|||.+.. ..++.++|+||+||++++|++|..||.+.+.......+..
T Consensus 156 ~~~---~~~~~~~~~~~ape~~~~--~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~-------------- 216 (257)
T cd08225 156 MEL---AYTCVGTPYYLSPEICQN--RPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVLKICQ-------------- 216 (257)
T ss_pred ccc---ccccCCCccccCHHHHcC--CCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhc--------------
Confidence 211 123468889999998876 5688999999999999999999999976553332221110
Q ss_pred hhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHhc
Q 007541 260 LLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERML 339 (599)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL 339 (599)
..+....+..+..+.++|.+||
T Consensus 217 ----------------------------------------------------------~~~~~~~~~~~~~~~~~i~~~l 238 (257)
T cd08225 217 ----------------------------------------------------------GYFAPISPNFSRDLRSLISQLF 238 (257)
T ss_pred ----------------------------------------------------------ccCCCCCCCCCHHHHHHHHHHh
Confidence 0011222456778999999999
Q ss_pred ccCCCCCCCHHHHhcCccc
Q 007541 340 AFEPKDRPTAEEALADPYF 358 (599)
Q Consensus 340 ~~DP~~RpTa~e~L~HP~f 358 (599)
..||++|||+.|+|.||||
T Consensus 239 ~~~p~~Rpt~~~ll~~~~~ 257 (257)
T cd08225 239 KVSPRDRPSITSILKRPFL 257 (257)
T ss_pred ccChhhCcCHHHHhhCCCC
Confidence 9999999999999999997
No 222
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=3.2e-39 Score=332.47 Aligned_cols=246 Identities=19% Similarity=0.242 Sum_probs=200.0
Q ss_pred EEEeecCceEEEEEEECCCCcEEEEEEecCcccChhh-HHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEEEEEe
Q 007541 29 EVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSD-ATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVVFE 107 (599)
Q Consensus 29 ~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~-~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~iylV~E 107 (599)
..||+|++|.||+|.. +|+.||||+++........ .+.+.+|+.+|+.++||||+++++++.... .+...+|+|||
T Consensus 26 ~~i~~g~~~~v~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~-~~~~~~~lv~E 102 (283)
T PHA02988 26 VLIKENDQNSIYKGIF--NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIV-DDLPRLSLILE 102 (283)
T ss_pred eEEeeCCceEEEEEEE--CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecc-cCCCceEEEEE
Confidence 5699999999999976 6899999999764332222 366779999999999999999999986411 22347899999
Q ss_pred cCC-cCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhccc-CceEeecCCCCcEEeCCCCceeeeccCccccccCCCCCccc
Q 007541 108 LME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHT-ANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIF 185 (599)
Q Consensus 108 ~~~-g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs-~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~~~~~~ 185 (599)
|+. |+|.+++...+.+++.....++.|++.||.|||+ .+++||||||+|||++.++.+||+|||+++......
T Consensus 103 y~~~g~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~~----- 177 (283)
T PHA02988 103 YCTRGYLREVLDKEKDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTENYKLKIICHGLEKILSSPP----- 177 (283)
T ss_pred eCCCCcHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEECCCCcEEEcccchHhhhcccc-----
Confidence 999 5899999988889999999999999999999998 499999999999999999999999999998653221
Q ss_pred ccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHhhhhhhh
Q 007541 186 WTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVCLLLNII 265 (599)
Q Consensus 186 ~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~~~~~~~ 265 (599)
...+++..|+|||++.+....++.++|||||||++|||++|+.||.+.+..+.+..+.....
T Consensus 178 -~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~~~i~~~~~----------------- 239 (283)
T PHA02988 178 -FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIYDLIINKNN----------------- 239 (283)
T ss_pred -ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCC-----------------
Confidence 23467889999999865435799999999999999999999999987665444333321100
Q ss_pred hcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCC
Q 007541 266 WCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKD 345 (599)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL~~DP~~ 345 (599)
... .....++.+.+||.+||+.||.+
T Consensus 240 ---------------------------------------------------~~~---~~~~~~~~l~~li~~cl~~dp~~ 265 (283)
T PHA02988 240 ---------------------------------------------------SLK---LPLDCPLEIKCIVEACTSHDSIK 265 (283)
T ss_pred ---------------------------------------------------CCC---CCCcCcHHHHHHHHHHhcCCccc
Confidence 000 11246788999999999999999
Q ss_pred CCCHHHHhc
Q 007541 346 RPTAEEALA 354 (599)
Q Consensus 346 RpTa~e~L~ 354 (599)
|||++|+|+
T Consensus 266 Rps~~ell~ 274 (283)
T PHA02988 266 RPNIKEILY 274 (283)
T ss_pred CcCHHHHHH
Confidence 999999986
No 223
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=1e-38 Score=323.81 Aligned_cols=259 Identities=27% Similarity=0.457 Sum_probs=208.8
Q ss_pred CceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcc---cChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCC
Q 007541 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIF---EHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREF 99 (599)
Q Consensus 23 ~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~---~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~ 99 (599)
..|.+.+.||+|++|.||+|.+..+++.||+|.+.... ........+.+|+.+++.++|+||+++++.+.+. +.
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~---~~ 78 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDP---EE 78 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcC---CC
Confidence 57999999999999999999999999999999875321 1223456788999999999999999999988543 22
Q ss_pred ccEEEEEecCC-cCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccC
Q 007541 100 KDIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFN 178 (599)
Q Consensus 100 ~~iylV~E~~~-g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~ 178 (599)
..+++|+||+. ++|.+++...+.+++..++.++.||+.||.|||+.||+|+||||+||+++.++.++|+|||+++....
T Consensus 79 ~~~~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~ 158 (264)
T cd06653 79 KKLSIFVEYMPGGSIKDQLKAYGALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRIQT 158 (264)
T ss_pred CEEEEEEEeCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECcccccccccc
Confidence 46899999998 58999998877899999999999999999999999999999999999999999999999999986533
Q ss_pred CCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHH
Q 007541 179 DTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARV 258 (599)
Q Consensus 179 ~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~ 258 (599)
........+...++..|+|||.+.+ ..++.++|+|||||++++|++|++||.+......+..+ ...+.
T Consensus 159 ~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~---~~~~~------- 226 (264)
T cd06653 159 ICMSGTGIKSVTGTPYWMSPEVISG--EGYGRKADVWSVACTVVEMLTEKPPWAEYEAMAAIFKI---ATQPT------- 226 (264)
T ss_pred ccccCccccccCCcccccCHhhhcC--CCCCccccHHHHHHHHHHHHhCCCCCCccCHHHHHHHH---HcCCC-------
Confidence 2111112234568899999999876 57889999999999999999999999765432221111 11100
Q ss_pred hhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHh
Q 007541 259 CLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERM 338 (599)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~m 338 (599)
.......+++.+.++|.+|
T Consensus 227 -------------------------------------------------------------~~~~p~~~~~~~~~~i~~~ 245 (264)
T cd06653 227 -------------------------------------------------------------KPMLPDGVSDACRDFLKQI 245 (264)
T ss_pred -------------------------------------------------------------CCCCCcccCHHHHHHHHHH
Confidence 0112235778899999999
Q ss_pred cccCCCCCCCHHHHhcCccc
Q 007541 339 LAFEPKDRPTAEEALADPYF 358 (599)
Q Consensus 339 L~~DP~~RpTa~e~L~HP~f 358 (599)
|+ +|..|||+.++|.|||.
T Consensus 246 l~-~~~~r~~~~~~~~~~~~ 264 (264)
T cd06653 246 FV-EEKRRPTAEFLLRHPFV 264 (264)
T ss_pred hc-CcccCccHHHHhcCCCC
Confidence 99 57999999999999984
No 224
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=100.00 E-value=3.2e-39 Score=328.36 Aligned_cols=256 Identities=31% Similarity=0.543 Sum_probs=211.0
Q ss_pred CceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCccc-ChhhHHHHHHHHHHHHhcC-CCCccccceeecCCCcCCCc
Q 007541 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFE-HVSDATRILREIKLLRLLR-HPDIVEIKHILLPPSRREFK 100 (599)
Q Consensus 23 ~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~-~~~~~~~i~rEi~iL~~l~-HpnIv~l~~v~~~~s~~~~~ 100 (599)
++|++.+.||+|+||.||+|.+..+|+.||||++..... .......+.+|+.+++.++ |+||+++++++.. ..
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~-----~~ 75 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQD-----EE 75 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcC-----Cc
Confidence 479999999999999999999999999999999875322 2333467789999999998 9999999998843 34
Q ss_pred cEEEEEecCC-cCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCC
Q 007541 101 DIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFND 179 (599)
Q Consensus 101 ~iylV~E~~~-g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~ 179 (599)
.+|+|||++. ++|.+++...+.+++..++.++.||+.||.|||+.|++|+||+|+||+++.++.++|+|||++......
T Consensus 76 ~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~ 155 (280)
T cd05581 76 NLYFVLEYAPNGELLQYIRKYGSLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPN 155 (280)
T ss_pred eEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEecCCccccccCCc
Confidence 7999999995 799999998888999999999999999999999999999999999999999999999999999865432
Q ss_pred CCC-----------------cccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHH
Q 007541 180 TPT-----------------AIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDI 242 (599)
Q Consensus 180 ~~~-----------------~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~ 242 (599)
... ........++..|+|||.+.. ..++.++|||||||++++|++|+.||...+....+..
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~--~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~ 233 (280)
T cd05581 156 SSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNE--KPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYLTFQK 233 (280)
T ss_pred cccccCCCCCccccccccccccccccccCCccccCHHHhCC--CCCChhhhHHHHHHHHHHHHhCCCCCCCccHHHHHHH
Confidence 211 011223467889999998876 5688899999999999999999999987653332222
Q ss_pred HHHhcCCCCHHHHHHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCC
Q 007541 243 MTDLLGTPSPEAIARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQ 322 (599)
Q Consensus 243 I~~~lG~p~~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (599)
+... . ..
T Consensus 234 ~~~~----------------------------------------------------------------------~---~~ 240 (280)
T cd05581 234 ILKL----------------------------------------------------------------------E---YS 240 (280)
T ss_pred HHhc----------------------------------------------------------------------C---CC
Confidence 2100 0 01
Q ss_pred CCCCCCHHHHHHHHHhcccCCCCCCCH----HHHhcCccc
Q 007541 323 KFPNANPLALRLLERMLAFEPKDRPTA----EEALADPYF 358 (599)
Q Consensus 323 ~~~~~s~~a~dLL~~mL~~DP~~RpTa----~e~L~HP~f 358 (599)
.....++.+.+||.+||+.||.+|||+ +|+|+||||
T Consensus 241 ~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~~~~ 280 (280)
T cd05581 241 FPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAHPFF 280 (280)
T ss_pred CCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcCCCC
Confidence 113457889999999999999999999 999999998
No 225
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=2.5e-39 Score=332.07 Aligned_cols=252 Identities=27% Similarity=0.401 Sum_probs=197.1
Q ss_pred EEeecCceEEEEEEECCCCcEEEEEEecCcccChh-hHHHHHHHHHHHHh---cCCCCccccceeecCCCcCCCccEEEE
Q 007541 30 VIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVS-DATRILREIKLLRL---LRHPDIVEIKHILLPPSRREFKDIYVV 105 (599)
Q Consensus 30 ~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~-~~~~i~rEi~iL~~---l~HpnIv~l~~v~~~~s~~~~~~iylV 105 (599)
+||+|+||.||++.+..+++.||||.+........ ......+|..+++. ..|+||+.+++.+.. .+.+|+|
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-----~~~~~lv 75 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHT-----PDKLCFI 75 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEec-----CCeEEEE
Confidence 48999999999999999999999999865432222 22334455544444 469999999998843 3478999
Q ss_pred EecCC-cCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCCCCCcc
Q 007541 106 FELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAI 184 (599)
Q Consensus 106 ~E~~~-g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~~~~~ 184 (599)
|||+. ++|.+++..++.+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||++.......
T Consensus 76 ~e~~~~~~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~---- 151 (279)
T cd05633 76 LDLMNGGDLHYHLSQHGVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK---- 151 (279)
T ss_pred EecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEECCCCCEEEccCCcceeccccC----
Confidence 99999 6999999888889999999999999999999999999999999999999999999999999997543221
Q ss_pred cccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHhhhhhh
Q 007541 185 FWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVCLLLNI 264 (599)
Q Consensus 185 ~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~~~~~~ 264 (599)
.....++..|+|||.+... ..++.++||||+||++++|++|..||.+....... .+..
T Consensus 152 -~~~~~~~~~y~aPE~~~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~-------------~~~~------- 209 (279)
T cd05633 152 -PHASVGTHGYMAPEVLQKG-TAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH-------------EIDR------- 209 (279)
T ss_pred -ccCcCCCcCccCHHHhcCC-CCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHH-------------HHHH-------
Confidence 1234789999999987531 56889999999999999999999999764321110 0000
Q ss_pred hhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHhcccCCC
Q 007541 265 IWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPK 344 (599)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL~~DP~ 344 (599)
...... ....+..++.+.+||.+||..||.
T Consensus 210 -----------------------------------------------~~~~~~---~~~~~~~~~~~~~li~~~l~~~p~ 239 (279)
T cd05633 210 -----------------------------------------------MTLTVN---VELPDSFSPELKSLLEGLLQRDVS 239 (279)
T ss_pred -----------------------------------------------HhhcCC---cCCccccCHHHHHHHHHHhcCCHH
Confidence 000000 012245678899999999999999
Q ss_pred CCC-----CHHHHhcCccccCcc
Q 007541 345 DRP-----TAEEALADPYFKGLA 362 (599)
Q Consensus 345 ~Rp-----Ta~e~L~HP~f~~~~ 362 (599)
+|+ |++|+++||||+++.
T Consensus 240 ~R~~~~~~~~~~~~~h~~~~~~~ 262 (279)
T cd05633 240 KRLGCLGRGAQEVKEHVFFKGID 262 (279)
T ss_pred HhcCCCCCCHHHHHhCccccCCC
Confidence 999 699999999999853
No 226
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=8.2e-39 Score=328.93 Aligned_cols=266 Identities=24% Similarity=0.397 Sum_probs=207.0
Q ss_pred CceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccE
Q 007541 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDI 102 (599)
Q Consensus 23 ~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~i 102 (599)
++|++.+.||.|++|.||+|.+..+++.||+|.+.... ......++.+|+.+|+.++||||+++++++... ....+
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~---~~~~~ 76 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDP-NPDLQKQILRELEINKSCKSPYIVKYYGAFLDE---SSSSI 76 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCC-chHHHHHHHHHHHHHHhCCCCCeeeeeeEEEcc---CCCeE
Confidence 47999999999999999999999999999999987432 223456788999999999999999999988543 23468
Q ss_pred EEEEecCC-cCHHHHHHh----CCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCcccccc
Q 007541 103 YVVFELME-SDLHQVIKA----NDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAF 177 (599)
Q Consensus 103 ylV~E~~~-g~L~~~i~~----~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~ 177 (599)
|+||||++ ++|.+++.. ...+++..+..++.||+.||.|||+.|++|+||+|+||+++.++.++|+|||++....
T Consensus 77 ~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~ 156 (287)
T cd06621 77 GIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLTRKGQVKLCDFGVSGELV 156 (287)
T ss_pred EEEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecCCeEEEeecccccccc
Confidence 99999998 588887643 3468999999999999999999999999999999999999999999999999987543
Q ss_pred CCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCCh--hhHHHHHHHhcCCCCHHHH
Q 007541 178 NDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNV--VHQLDIMTDLLGTPSPEAI 255 (599)
Q Consensus 178 ~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~--~~~l~~I~~~lG~p~~e~i 255 (599)
.... ....++..|+|||.+.+ ..++.++||||||||+|+|++|..||..... ....+...
T Consensus 157 ~~~~-----~~~~~~~~y~~pE~~~~--~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~----------- 218 (287)
T cd06621 157 NSLA-----GTFTGTSFYMAPERIQG--KPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLS----------- 218 (287)
T ss_pred cccc-----ccccCCccccCHHHhcC--CCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHH-----------
Confidence 2221 23457888999999876 6789999999999999999999999976532 00000000
Q ss_pred HHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHH
Q 007541 256 ARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLL 335 (599)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL 335 (599)
++..............-...++.+.+||
T Consensus 219 ----------------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~li 246 (287)
T cd06621 219 ----------------------------------------------------YIVNMPNPELKDEPGNGIKWSEEFKDFI 246 (287)
T ss_pred ----------------------------------------------------HHhcCCchhhccCCCCCCchHHHHHHHH
Confidence 0000000000000000012457789999
Q ss_pred HHhcccCCCCCCCHHHHhcCccccCcc
Q 007541 336 ERMLAFEPKDRPTAEEALADPYFKGLA 362 (599)
Q Consensus 336 ~~mL~~DP~~RpTa~e~L~HP~f~~~~ 362 (599)
.+||..||.+|||+.|++.||||+...
T Consensus 247 ~~~l~~~p~~Rpt~~eil~~~~~~~~~ 273 (287)
T cd06621 247 KQCLEKDPTRRPTPWDMLEHPWIKAQM 273 (287)
T ss_pred HHHcCCCcccCCCHHHHHhCccccccc
Confidence 999999999999999999999997553
No 227
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=7.8e-39 Score=329.21 Aligned_cols=259 Identities=29% Similarity=0.537 Sum_probs=211.2
Q ss_pred CceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccE
Q 007541 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDI 102 (599)
Q Consensus 23 ~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~i 102 (599)
..|...+.||.|++|.||++.+..+++.||||++... .......+.+|+.+++.++|+||+++++.+... ...
T Consensus 19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~--~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~-----~~~ 91 (285)
T cd06648 19 SYLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLR--KQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVG-----DEL 91 (285)
T ss_pred HhhhcceEeccCCCeEEEEEEECCCCCEEEEEEEecc--chhHHHHHHHHHHHHHHcCCCChheEEEEEEcC-----CeE
Confidence 4566678999999999999999999999999998632 223445678999999999999999999988533 478
Q ss_pred EEEEecCC-cCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCCCC
Q 007541 103 YVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTP 181 (599)
Q Consensus 103 ylV~E~~~-g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~~ 181 (599)
|+|+||+. ++|.+++.. +.+++..+..++.||+.||.|||++||+||||+|+||+++.++.++|+|||.+........
T Consensus 92 ~~v~e~~~~~~L~~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~ 170 (285)
T cd06648 92 WVVMEFLEGGALTDIVTH-TRMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVP 170 (285)
T ss_pred EEEEeccCCCCHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEEcCCCcEEEcccccchhhccCCc
Confidence 99999998 599998877 5799999999999999999999999999999999999999999999999998875533222
Q ss_pred CcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHhhh
Q 007541 182 TAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVCLL 261 (599)
Q Consensus 182 ~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~~~ 261 (599)
. .....++..|+|||.+.+ ..++.++||||+||++++|++|+.||.+.+....+..+...
T Consensus 171 ~---~~~~~~~~~y~aPE~~~~--~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~~~~~--------------- 230 (285)
T cd06648 171 R---RKSLVGTPYWMAPEVISR--LPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIRDN--------------- 230 (285)
T ss_pred c---cccccCCccccCHHHhcC--CCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHhc---------------
Confidence 1 123568899999999876 56889999999999999999999999776544333322211
Q ss_pred hhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHhccc
Q 007541 262 LNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAF 341 (599)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL~~ 341 (599)
.+ +........+..+.+||.+||+.
T Consensus 231 ------------------------------------------------------~~-~~~~~~~~~~~~l~~li~~~l~~ 255 (285)
T cd06648 231 ------------------------------------------------------LP-PKLKNLHKVSPRLRSFLDRMLVR 255 (285)
T ss_pred ------------------------------------------------------CC-CCCcccccCCHHHHHHHHHHccc
Confidence 00 00001123677899999999999
Q ss_pred CCCCCCCHHHHhcCccccCcccC
Q 007541 342 EPKDRPTAEEALADPYFKGLAKV 364 (599)
Q Consensus 342 DP~~RpTa~e~L~HP~f~~~~~~ 364 (599)
||++|||+.++|+||||+....+
T Consensus 256 ~p~~Rpt~~~il~~~~~~~~~~~ 278 (285)
T cd06648 256 DPAQRATAAELLNHPFLAKAGPP 278 (285)
T ss_pred ChhhCcCHHHHccCcccccCCCc
Confidence 99999999999999999986543
No 228
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=6.8e-39 Score=332.29 Aligned_cols=259 Identities=21% Similarity=0.328 Sum_probs=197.9
Q ss_pred CCceEEEEEEeecCceEEEEEEECC----------------CCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCcc
Q 007541 22 GSRYKIEEVIGKGSYGVVCSAYDTR----------------TGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIV 85 (599)
Q Consensus 22 ~~rY~i~~~LG~G~~g~V~~a~d~~----------------tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv 85 (599)
.++|++.++||+|+||+||+|.+.. ++..||||++.... .......+.+|+.+|+.++||||+
T Consensus 4 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv 82 (304)
T cd05096 4 RGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDA-NKNARNDFLKEVKILSRLKDPNII 82 (304)
T ss_pred hhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCC-CHHHHHHHHHHHHHHhhcCCCCee
Confidence 4689999999999999999998532 34579999987532 223445788999999999999999
Q ss_pred ccceeecCCCcCCCccEEEEEecCC-cCHHHHHHhCC-------------------CCCHHHHHHHHHHHHhhhhhcccC
Q 007541 86 EIKHILLPPSRREFKDIYVVFELME-SDLHQVIKAND-------------------DLTPEHYQFFLYQLLRGLKYIHTA 145 (599)
Q Consensus 86 ~l~~v~~~~s~~~~~~iylV~E~~~-g~L~~~i~~~~-------------------~lse~~i~~i~~QLl~aL~yLHs~ 145 (599)
++++++... ..+|+||||+. ++|.+++.... .+++..+..++.||+.||.|||+.
T Consensus 83 ~~~~~~~~~-----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~ 157 (304)
T cd05096 83 RLLGVCVDE-----DPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSL 157 (304)
T ss_pred EEEEEEecC-----CceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHC
Confidence 999998543 46899999998 69999886532 357788999999999999999999
Q ss_pred ceEeecCCCCcEEeCCCCceeeeccCccccccCCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHH
Q 007541 146 NVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELL 225 (599)
Q Consensus 146 gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLl 225 (599)
||+||||||+|||++.++.+||+|||+++........ .......++..|+|||++.. ..++.++|||||||++++|+
T Consensus 158 ~ivH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~--~~~~~~~Dv~slG~~l~el~ 234 (304)
T cd05096 158 NFVHRDLATRNCLVGENLTIKIADFGMSRNLYAGDYY-RIQGRAVLPIRWMAWECILM--GKFTTASDVWAFGVTLWEIL 234 (304)
T ss_pred CccccCcchhheEEcCCccEEECCCccceecccCcee-EecCcCCCCccccCHHHHhc--CCCCchhhhHHHHHHHHHHH
Confidence 9999999999999999999999999999765332211 11123455788999999876 57899999999999999998
Q ss_pred h--CCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccH
Q 007541 226 T--GKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNE 303 (599)
Q Consensus 226 t--G~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (599)
+ |..||.+.+..+.+..+...+
T Consensus 235 ~~~~~~p~~~~~~~~~~~~~~~~~-------------------------------------------------------- 258 (304)
T cd05096 235 MLCKEQPYGELTDEQVIENAGEFF-------------------------------------------------------- 258 (304)
T ss_pred HccCCCCCCcCCHHHHHHHHHHHh--------------------------------------------------------
Confidence 7 556777655443332221110
Q ss_pred HHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 007541 304 KARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALA 354 (599)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL~~DP~~RpTa~e~L~ 354 (599)
. ...........+..+..+.+||.+||+.||.+|||++|+.+
T Consensus 259 ------~---~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~ 300 (304)
T cd05096 259 ------R---DQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHA 300 (304)
T ss_pred ------h---hccccccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHH
Confidence 0 00000001112356788999999999999999999999943
No 229
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=2.6e-39 Score=335.06 Aligned_cols=261 Identities=28% Similarity=0.518 Sum_probs=211.1
Q ss_pred CCCCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCC
Q 007541 20 GEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREF 99 (599)
Q Consensus 20 ~~~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~ 99 (599)
+...-|.....||+|+||.||+|.+..+++.||||++... .......+.+|+.+++.+.||||+++++.+.. .
T Consensus 18 ~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~--~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~-----~ 90 (297)
T cd06659 18 DPRSLLENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLR--KQQRRELLFNEVVIMRDYQHQNVVEMYKSYLV-----G 90 (297)
T ss_pred cchhhHHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEec--ccchHHHHHHHHHHHHhCCCCchhhhhhheee-----C
Confidence 4445556667899999999999999999999999998642 22334567899999999999999999998843 3
Q ss_pred ccEEEEEecCC-cCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccC
Q 007541 100 KDIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFN 178 (599)
Q Consensus 100 ~~iylV~E~~~-g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~ 178 (599)
..+|+|+||++ ++|.+++.. ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.....
T Consensus 91 ~~~~iv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~ 169 (297)
T cd06659 91 EELWVLMEFLQGGALTDIVSQ-TRLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISK 169 (297)
T ss_pred CeEEEEEecCCCCCHHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEEccCCcEEEeechhHhhccc
Confidence 47999999999 588887755 4689999999999999999999999999999999999999999999999999975432
Q ss_pred CCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHH
Q 007541 179 DTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARV 258 (599)
Q Consensus 179 ~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~ 258 (599)
... .....+++..|+|||++.+ ..++.++||||+||++++|++|+.||...+....+..+.. .
T Consensus 170 ~~~---~~~~~~~~~~y~aPE~~~~--~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~---~--------- 232 (297)
T cd06659 170 DVP---KRKSLVGTPYWMAPEVISR--TPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRD---S--------- 232 (297)
T ss_pred ccc---cccceecCccccCHHHHcc--CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc---c---------
Confidence 221 1234578999999999876 5789999999999999999999999987665443332211 0
Q ss_pred hhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHh
Q 007541 259 CLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERM 338 (599)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~m 338 (599)
...........++.+.+||.+|
T Consensus 233 ----------------------------------------------------------~~~~~~~~~~~~~~l~~~i~~~ 254 (297)
T cd06659 233 ----------------------------------------------------------PPPKLKNAHKISPVLRDFLERM 254 (297)
T ss_pred ----------------------------------------------------------CCCCccccCCCCHHHHHHHHHH
Confidence 0001112235677899999999
Q ss_pred cccCCCCCCCHHHHhcCccccCccc
Q 007541 339 LAFEPKDRPTAEEALADPYFKGLAK 363 (599)
Q Consensus 339 L~~DP~~RpTa~e~L~HP~f~~~~~ 363 (599)
|+.||.+|||++++++||||.....
T Consensus 255 l~~~P~~Rps~~~ll~~~~~~~~~~ 279 (297)
T cd06659 255 LTREPQERATAQELLDHPFLLQTGL 279 (297)
T ss_pred hcCCcccCcCHHHHhhChhhccCCC
Confidence 9999999999999999999987653
No 230
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=6.3e-39 Score=326.18 Aligned_cols=251 Identities=20% Similarity=0.303 Sum_probs=200.3
Q ss_pred CCceEEEEEEeecCceEEEEEEEC---CCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCC
Q 007541 22 GSRYKIEEVIGKGSYGVVCSAYDT---RTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRRE 98 (599)
Q Consensus 22 ~~rY~i~~~LG~G~~g~V~~a~d~---~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~ 98 (599)
.++|++.+.||+|+||.||+|.++ ..+..||+|+++.... ......+.+|+.+|+.++||||+++++++..
T Consensus 4 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~----- 77 (266)
T cd05064 4 NKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCS-DKQRRGFLAEALTLGQFDHSNIVRLEGVITR----- 77 (266)
T ss_pred hHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCC-HHHHHHHHHHHHHHhcCCCCCcCeEEEEEec-----
Confidence 568999999999999999999865 4567899999875322 2334568899999999999999999999853
Q ss_pred CccEEEEEecCC-cCHHHHHHhC-CCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccc
Q 007541 99 FKDIYVVFELME-SDLHQVIKAN-DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVA 176 (599)
Q Consensus 99 ~~~iylV~E~~~-g~L~~~i~~~-~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~ 176 (599)
...+|+||||++ ++|.+++... +.+++..+..++.||+.||.|||++|++||||||+|||++.++.+||+|||.+...
T Consensus 78 ~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili~~~~~~~l~dfg~~~~~ 157 (266)
T cd05064 78 GNTMMIVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLVNSDLVCKISGFRRLQED 157 (266)
T ss_pred CCCcEEEEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEEcCCCcEEECCCcccccc
Confidence 347999999999 5899888764 47899999999999999999999999999999999999999999999999987653
Q ss_pred cCCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHh-CCCCCCCCChhhHHHHHHHhcCCCCHHHH
Q 007541 177 FNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLLGTPSPEAI 255 (599)
Q Consensus 177 ~~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLlt-G~~pF~g~~~~~~l~~I~~~lG~p~~e~i 255 (599)
...... ......++..|+|||++.+ ..++.++||||+||++++|++ |..||.+.+..+.+..+.+..
T Consensus 158 ~~~~~~--~~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~-------- 225 (266)
T cd05064 158 KSEAIY--TTMSGKSPVLWAAPEAIQY--HHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDVIKAVEDGF-------- 225 (266)
T ss_pred cccchh--cccCCCCceeecCHHHHhh--CCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCC--------
Confidence 221110 0012234568999999876 688999999999999999775 999998766544333332110
Q ss_pred HHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHH
Q 007541 256 ARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLL 335 (599)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL 335 (599)
.. ......+..+.+|+
T Consensus 226 -------------------------------------------------------------~~---~~~~~~~~~~~~li 241 (266)
T cd05064 226 -------------------------------------------------------------RL---PAPRNCPNLLHQLM 241 (266)
T ss_pred -------------------------------------------------------------CC---CCCCCCCHHHHHHH
Confidence 00 11234677899999
Q ss_pred HHhcccCCCCCCCHHHHhc
Q 007541 336 ERMLAFEPKDRPTAEEALA 354 (599)
Q Consensus 336 ~~mL~~DP~~RpTa~e~L~ 354 (599)
.+||+.||.+|||++++++
T Consensus 242 ~~c~~~~p~~RP~~~~i~~ 260 (266)
T cd05064 242 LDCWQKERGERPRFSQIHS 260 (266)
T ss_pred HHHcCCCchhCCCHHHHHH
Confidence 9999999999999999975
No 231
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.9e-41 Score=374.79 Aligned_cols=264 Identities=23% Similarity=0.394 Sum_probs=223.6
Q ss_pred CCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcc-cChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCc
Q 007541 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIF-EHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFK 100 (599)
Q Consensus 22 ~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~-~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~ 100 (599)
.++|.|+++||+|+||.|.+++++.|++.||+|++++.. ....+..-|..|-.+|..-+.+-|+.|+-.| .+..
T Consensus 74 ~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAF-----QD~~ 148 (1317)
T KOG0612|consen 74 AEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAF-----QDER 148 (1317)
T ss_pred HHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHh-----cCcc
Confidence 578999999999999999999999999999999997521 2233445677888899888899999999999 4456
Q ss_pred cEEEEEecCC-cCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCC
Q 007541 101 DIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFND 179 (599)
Q Consensus 101 ~iylV~E~~~-g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~ 179 (599)
++|||||||. |||..++...++++++-+++|+..|+-||.-||+.|+|||||||+|||+|..|+|||+|||.+-....+
T Consensus 149 ~LYlVMdY~pGGDlltLlSk~~~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld~~GHikLADFGsClkm~~d 228 (1317)
T KOG0612|consen 149 YLYLVMDYMPGGDLLTLLSKFDRLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLDKSGHIKLADFGSCLKMDAD 228 (1317)
T ss_pred ceEEEEecccCchHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEecccCcEeeccchhHHhcCCC
Confidence 8999999999 699999999889999999999999999999999999999999999999999999999999999766432
Q ss_pred CCCcccccccccCccccCccccccc---cCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHH
Q 007541 180 TPTAIFWTDYVATRWYRAPELCGSF---FSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIA 256 (599)
Q Consensus 180 ~~~~~~~t~~~gt~~Y~APE~l~~~---~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~ 256 (599)
. .......+|||.|.+||++... ...|+..+|.||+||++||||.|..||..++.++.+-+|.+.-
T Consensus 229 G--~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~KIm~hk--------- 297 (1317)
T KOG0612|consen 229 G--TVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYGKIMNHK--------- 297 (1317)
T ss_pred C--cEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHHHhchh---------
Confidence 2 2234567999999999997432 2569999999999999999999999999999888888876420
Q ss_pred HHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHH
Q 007541 257 RVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLE 336 (599)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~ 336 (599)
....|. -...+|+.++|||+
T Consensus 298 -----------------------------------------------------------~~l~FP-~~~~VSeeakdLI~ 317 (1317)
T KOG0612|consen 298 -----------------------------------------------------------ESLSFP-DETDVSEEAKDLIE 317 (1317)
T ss_pred -----------------------------------------------------------hhcCCC-cccccCHHHHHHHH
Confidence 011111 11248999999999
Q ss_pred HhcccCCCCCCC---HHHHhcCccccCcc
Q 007541 337 RMLAFEPKDRPT---AEEALADPYFKGLA 362 (599)
Q Consensus 337 ~mL~~DP~~RpT---a~e~L~HP~f~~~~ 362 (599)
++|. +|..|.. ++|+-.||||.++.
T Consensus 318 ~ll~-~~e~RLgrngiedik~HpFF~g~~ 345 (1317)
T KOG0612|consen 318 ALLC-DREVRLGRNGIEDIKNHPFFEGID 345 (1317)
T ss_pred HHhc-ChhhhcccccHHHHHhCccccCCC
Confidence 9997 7999998 99999999999874
No 232
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=1.1e-38 Score=319.49 Aligned_cols=253 Identities=29% Similarity=0.520 Sum_probs=211.5
Q ss_pred ceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEE
Q 007541 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIY 103 (599)
Q Consensus 24 rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~iy 103 (599)
+|.+.+.||.|+||.||++.+..++..||+|++............+.+|+.+++.++|+|++++.+.+... ..++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~-----~~~~ 75 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEK-----GKLC 75 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecC-----CEEE
Confidence 68999999999999999999999999999999976544445667788999999999999999999998543 5799
Q ss_pred EEEecCC-cCHHHHHHhC----CCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccC
Q 007541 104 VVFELME-SDLHQVIKAN----DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFN 178 (599)
Q Consensus 104 lV~E~~~-g~L~~~i~~~----~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~ 178 (599)
+|+|+++ ++|.+++... ..+++..+..++.||+.||.|||+.|++|+||+|+||+++.++.++|+|||++.....
T Consensus 76 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~ 155 (258)
T cd08215 76 IVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSS 155 (258)
T ss_pred EEEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEEcCCCcEEECCccceeeccc
Confidence 9999998 4899998763 6799999999999999999999999999999999999999999999999999986543
Q ss_pred CCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHH
Q 007541 179 DTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARV 258 (599)
Q Consensus 179 ~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~ 258 (599)
... ......++..|+|||.+.. ..++.++|+||+|+++++|++|+.||...+.......+..
T Consensus 156 ~~~---~~~~~~~~~~y~~pe~~~~--~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~------------- 217 (258)
T cd08215 156 TVD---LAKTVVGTPYYLSPELCQN--KPYNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKILK------------- 217 (258)
T ss_pred Ccc---eecceeeeecccChhHhcc--CCCCccccHHHHHHHHHHHHcCCCCCCCCcHHHHHHHHhc-------------
Confidence 321 1234578889999998876 5688999999999999999999999976653322221110
Q ss_pred hhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHh
Q 007541 259 CLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERM 338 (599)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~m 338 (599)
.. ........+..+.++|.+|
T Consensus 218 --------------------------------------------------------~~---~~~~~~~~~~~~~~~i~~~ 238 (258)
T cd08215 218 --------------------------------------------------------GQ---YPPIPSQYSSELRNLVSSL 238 (258)
T ss_pred --------------------------------------------------------CC---CCCCCCCCCHHHHHHHHHH
Confidence 00 1111124677899999999
Q ss_pred cccCCCCCCCHHHHhcCccc
Q 007541 339 LAFEPKDRPTAEEALADPYF 358 (599)
Q Consensus 339 L~~DP~~RpTa~e~L~HP~f 358 (599)
|..||.+|||+.|+|+||||
T Consensus 239 l~~~p~~Rp~~~~ll~~~~~ 258 (258)
T cd08215 239 LQKDPEERPSIAQILQSPFI 258 (258)
T ss_pred cCCChhhCcCHHHHhcCCCC
Confidence 99999999999999999997
No 233
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=3.6e-39 Score=329.66 Aligned_cols=252 Identities=26% Similarity=0.393 Sum_probs=202.6
Q ss_pred EeecCceEEEEEEECCCCcEEEEEEecCcccC-hhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEEEEEecC
Q 007541 31 IGKGSYGVVCSAYDTRTGEKVAIKKINDIFEH-VSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVVFELM 109 (599)
Q Consensus 31 LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~-~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~iylV~E~~ 109 (599)
||+|+||+||+|.+..+|+.||+|++...... ......+.+|+.+|+.++||||+++++++.. ...+|+||||+
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-----~~~~~lv~e~~ 75 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFET-----KDDLCLVMTLM 75 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEec-----CCeEEEEEecC
Confidence 68999999999999999999999998643222 2234566789999999999999999999843 35799999999
Q ss_pred C-cCHHHHHHhCC--CCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCCCCCcccc
Q 007541 110 E-SDLHQVIKAND--DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFW 186 (599)
Q Consensus 110 ~-g~L~~~i~~~~--~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~~~~~~~ 186 (599)
+ ++|.+++.... .+++..+..++.||+.||.|||+.||+||||+|+|||++.++.+||+|||+++...... ..
T Consensus 76 ~~~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~----~~ 151 (277)
T cd05577 76 NGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLDDHGNVRISDLGLAVELKGGK----KI 151 (277)
T ss_pred CCCcHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEccCcchhhhccCC----cc
Confidence 9 59999997765 79999999999999999999999999999999999999999999999999997653321 12
Q ss_pred cccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHhhhhhhhh
Q 007541 187 TDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVCLLLNIIW 266 (599)
Q Consensus 187 t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~~~~~~~~ 266 (599)
....++..|+|||.+.+ ..++.++||||+||++++|++|+.||.+.........+..
T Consensus 152 ~~~~~~~~y~~PE~~~~--~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~--------------------- 208 (277)
T cd05577 152 KGRAGTPGYMAPEVLQG--EVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKR--------------------- 208 (277)
T ss_pred ccccCCCCcCCHHHhcC--CCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHh---------------------
Confidence 33467888999999876 5689999999999999999999999976543111111100
Q ss_pred cCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCC
Q 007541 267 CGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDR 346 (599)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL~~DP~~R 346 (599)
.....+ .......++.+.+||++||+.||.+|
T Consensus 209 ---------------------------------------------~~~~~~---~~~~~~~~~~~~~li~~~l~~~p~~R 240 (277)
T cd05577 209 ---------------------------------------------RTLEMA---VEYPDKFSPEAKDLCEALLQKDPEKR 240 (277)
T ss_pred ---------------------------------------------cccccc---ccCCccCCHHHHHHHHHHccCChhHc
Confidence 000000 11223468899999999999999999
Q ss_pred C-----CHHHHhcCccccCcc
Q 007541 347 P-----TAEEALADPYFKGLA 362 (599)
Q Consensus 347 p-----Ta~e~L~HP~f~~~~ 362 (599)
| ++.++|+||||..+.
T Consensus 241 ~~~~~~~~~~ll~h~~~~~~~ 261 (277)
T cd05577 241 LGCRGGSADEVREHPLFKDLN 261 (277)
T ss_pred cCCCcccHHHHHhChhhhcCC
Confidence 9 999999999998653
No 234
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.7e-40 Score=352.50 Aligned_cols=266 Identities=32% Similarity=0.515 Sum_probs=212.5
Q ss_pred cccccccCCCCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeec
Q 007541 13 VDFFTEYGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILL 92 (599)
Q Consensus 13 ~~~~~~~~~~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~ 92 (599)
++|=-+|.+.++= -+||+|+||+||.|+|+.|....|||.|... .....+.+..||.+-++|+|.|||++++.+
T Consensus 568 iefeYeyde~~er---vVLGKGTYG~VYA~RD~~tqvrIaIKEIpek--dsr~~QPLhEEIaLH~~LrHkNIVrYLGs~- 641 (1226)
T KOG4279|consen 568 IEFEYEYDESNER---VVLGKGTYGTVYAARDMDTQVRIAIKEIPEK--DSREVQPLHEEIALHSTLRHKNIVRYLGSV- 641 (1226)
T ss_pred eEEEeeecCCCce---EEeecCceeEEEeeccccceeEEEeeecccc--cchhhccHHHHHHHHHHHhhHhHHHHhhcc-
Confidence 3443445554443 3589999999999999999999999998642 334556788999999999999999999997
Q ss_pred CCCcCCCccEEEEEecCC-cCHHHHHHh-CCCC--CHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCC-CCceee
Q 007541 93 PPSRREFKDIYVVFELME-SDLHQVIKA-NDDL--TPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANA-DCKLKI 167 (599)
Q Consensus 93 ~~s~~~~~~iylV~E~~~-g~L~~~i~~-~~~l--se~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~-~~~lKL 167 (599)
.+.+++-|.||-++ |+|..++++ .|++ .|..+.++.+||++||+|||.+.|||||||-+|+|||. .|.+||
T Consensus 642 ----senGf~kIFMEqVPGGSLSsLLrskWGPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvNTySGvlKI 717 (1226)
T KOG4279|consen 642 ----SENGFFKIFMEQVPGGSLSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVNTYSGVLKI 717 (1226)
T ss_pred ----CCCCeEEEEeecCCCCcHHHHHHhccCCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEeeccceEEe
Confidence 34457889999998 699999986 4777 89999999999999999999999999999999999986 699999
Q ss_pred eccCccccccCCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhc
Q 007541 168 CDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLL 247 (599)
Q Consensus 168 ~DFGlA~~~~~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~l 247 (599)
+|||-++....-++-. .+..||..|||||+|.....+|+.++|||||||++.||.||+|||-.-
T Consensus 718 SDFGTsKRLAginP~T---ETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~El------------- 781 (1226)
T KOG4279|consen 718 SDFGTSKRLAGINPCT---ETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVEL------------- 781 (1226)
T ss_pred cccccchhhccCCccc---cccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeec-------------
Confidence 9999998765444433 345689999999999665588999999999999999999999999642
Q ss_pred CCCCHHHHHHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCC
Q 007541 248 GTPSPEAIARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNA 327 (599)
Q Consensus 248 G~p~~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (599)
|.|.... +--.|-+.- ..+...+
T Consensus 782 gspqAAM-----------------------------------------------------FkVGmyKvH----P~iPeel 804 (1226)
T KOG4279|consen 782 GSPQAAM-----------------------------------------------------FKVGMYKVH----PPIPEEL 804 (1226)
T ss_pred CChhHhh-----------------------------------------------------hhhcceecC----CCCcHHH
Confidence 2221110 000000100 0111236
Q ss_pred CHHHHHHHHHhcccCCCCCCCHHHHhcCccccCc
Q 007541 328 NPLALRLLERMLAFEPKDRPTAEEALADPYFKGL 361 (599)
Q Consensus 328 s~~a~dLL~~mL~~DP~~RpTa~e~L~HP~f~~~ 361 (599)
+.+|+.||.+|+.+||.+||+|.++|++||++.-
T Consensus 805 saeak~FilrcFepd~~~R~sA~~LL~DpFlq~~ 838 (1226)
T KOG4279|consen 805 SAEAKNFILRCFEPDPCDRPSAKDLLQDPFLQHN 838 (1226)
T ss_pred HHHHHHHHHHHcCCCcccCccHHHhccCcccccC
Confidence 7789999999999999999999999999999866
No 235
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=6.2e-39 Score=333.28 Aligned_cols=262 Identities=27% Similarity=0.419 Sum_probs=211.9
Q ss_pred ccccCCCCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCccc-ChhhHHHHHHHHHHHHhcCCCCccccceeecCC
Q 007541 16 FTEYGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFE-HVSDATRILREIKLLRLLRHPDIVEIKHILLPP 94 (599)
Q Consensus 16 ~~~~~~~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~-~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~ 94 (599)
+.......+|++.+.||+|+||+||+|.+..+|+.||+|++..... .......+.+|+.+++.++||||+++.+++...
T Consensus 8 ~~~~~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~ 87 (307)
T cd06607 8 FSKDDPEKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLRE 87 (307)
T ss_pred hcCCCcchhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeC
Confidence 3344556789999999999999999999999999999999864322 233446788999999999999999999998543
Q ss_pred CcCCCccEEEEEecCCcCHHHHHHh-CCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCcc
Q 007541 95 SRREFKDIYVVFELMESDLHQVIKA-NDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLA 173 (599)
Q Consensus 95 s~~~~~~iylV~E~~~g~L~~~i~~-~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA 173 (599)
...|+||||+.++|.+++.. ...+++..+..++.||+.||.|||+.||+||||+|+||+++.++.+||+|||++
T Consensus 88 -----~~~~lv~e~~~g~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~~~~~~kL~dfg~~ 162 (307)
T cd06607 88 -----HTAWLVMEYCLGSASDILEVHKKPLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILLTEPGTVKLADFGSA 162 (307)
T ss_pred -----CeEEEEHHhhCCCHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEECCCCCEEEeecCcc
Confidence 46899999999999888764 357999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCcccccccccCccccCccccccc-cCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCH
Q 007541 174 RVAFNDTPTAIFWTDYVATRWYRAPELCGSF-FSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSP 252 (599)
Q Consensus 174 ~~~~~~~~~~~~~t~~~gt~~Y~APE~l~~~-~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~ 252 (599)
...... ....++..|+|||++.+. ...++.++||||+||++++|++|++||.+.+....+..+...
T Consensus 163 ~~~~~~-------~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~~~~~------ 229 (307)
T cd06607 163 SLVSPA-------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN------ 229 (307)
T ss_pred eecCCC-------CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHHHHhcC------
Confidence 754221 234678889999987431 246888999999999999999999999776544332222100
Q ss_pred HHHHHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHH
Q 007541 253 EAIARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLAL 332 (599)
Q Consensus 253 e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~ 332 (599)
....+ .....+..+.
T Consensus 230 ---------------------------------------------------------------~~~~~--~~~~~~~~~~ 244 (307)
T cd06607 230 ---------------------------------------------------------------DSPTL--SSNDWSDYFR 244 (307)
T ss_pred ---------------------------------------------------------------CCCCC--CchhhCHHHH
Confidence 00000 0112466789
Q ss_pred HHHHHhcccCCCCCCCHHHHhcCccccC
Q 007541 333 RLLERMLAFEPKDRPTAEEALADPYFKG 360 (599)
Q Consensus 333 dLL~~mL~~DP~~RpTa~e~L~HP~f~~ 360 (599)
+||.+||..||.+|||+.+++.||||..
T Consensus 245 ~li~~~l~~~p~~Rp~~~~il~~~~~~~ 272 (307)
T cd06607 245 NFVDSCLQKIPQDRPSSEELLKHRFVLR 272 (307)
T ss_pred HHHHHHhcCChhhCcCHHHHhcChhhcc
Confidence 9999999999999999999999999985
No 236
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=3.2e-39 Score=331.27 Aligned_cols=267 Identities=27% Similarity=0.406 Sum_probs=210.5
Q ss_pred CCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCcc
Q 007541 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKD 101 (599)
Q Consensus 22 ~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~ 101 (599)
.++|++++.||+|+||+||+|.+..+|+.||+|++.... .......+.+|+.+++.++||||+++++.+... ..
T Consensus 4 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-----~~ 77 (284)
T cd06620 4 NEDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGA-KSSVRKQILRELQIMHECRSPYIVSFYGAFLNE-----NN 77 (284)
T ss_pred HHHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecC-cchHHHHHHHHHHHHHHcCCCCcceEeeeEecC-----CE
Confidence 467999999999999999999999999999999886432 233456788999999999999999999998543 47
Q ss_pred EEEEEecCC-cCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhccc-CceEeecCCCCcEEeCCCCceeeeccCccccccCC
Q 007541 102 IYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHT-ANVFHRDLKPKNILANADCKLKICDFGLARVAFND 179 (599)
Q Consensus 102 iylV~E~~~-g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs-~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~ 179 (599)
+|+||||++ ++|.+++...+.+++..++.++.||+.+|.|||+ .||+||||||+||+++.++.++|+|||++......
T Consensus 78 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~ 157 (284)
T cd06620 78 ICMCMEFMDCGSLDRIYKKGGPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINS 157 (284)
T ss_pred EEEEEecCCCCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEECCCCcEEEccCCcccchhhh
Confidence 999999999 5899999887889999999999999999999997 59999999999999999999999999998654222
Q ss_pred CCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHh
Q 007541 180 TPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVC 259 (599)
Q Consensus 180 ~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~ 259 (599)
.. ...+++..|+|||.+.+ ..++.++||||+||++++|++|+.||.......... ...
T Consensus 158 ~~-----~~~~~~~~~~aPE~~~~--~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~--------~~~------- 215 (284)
T cd06620 158 IA-----DTFVGTSTYMSPERIQG--GKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQ--------DDP------- 215 (284)
T ss_pred cc-----CccccCcccCCHHHHcc--CCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhh--------hhh-------
Confidence 11 23478999999999876 578899999999999999999999998654321100 000
Q ss_pred hhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHhc
Q 007541 260 LLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERML 339 (599)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL 339 (599)
......+..+.......+. ....+..+.+||.+||
T Consensus 216 -------------------------------------------~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l 250 (284)
T cd06620 216 -------------------------------------------MGILDLLQQIVQEPPPRLP--SSDFPEDLRDFVDACL 250 (284)
T ss_pred -------------------------------------------hHHHHHHHHHhhccCCCCC--chhcCHHHHHHHHHHh
Confidence 0000111111111111110 0125678999999999
Q ss_pred ccCCCCCCCHHHHhcCccccCc
Q 007541 340 AFEPKDRPTAEEALADPYFKGL 361 (599)
Q Consensus 340 ~~DP~~RpTa~e~L~HP~f~~~ 361 (599)
+.||.+|||+.|+++|+||..-
T Consensus 251 ~~dp~~Rpt~~e~~~~~~~~~~ 272 (284)
T cd06620 251 LKDPTERPTPQQLCAMPPFIQA 272 (284)
T ss_pred cCCcccCcCHHHHhcCcccccc
Confidence 9999999999999999999754
No 237
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=8e-39 Score=322.30 Aligned_cols=249 Identities=29% Similarity=0.464 Sum_probs=204.6
Q ss_pred ceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEE
Q 007541 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIY 103 (599)
Q Consensus 24 rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~iy 103 (599)
+|++.+.||.|+||.||++.++.+++.||+|.++... .....+.+.+|+.+++.++|+||+++++.+. +...+|
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~ 74 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPK-SSSAVEDSRKEAVLLAKMKHPNIVAFKESFE-----ADGHLY 74 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCc-chHHHHHHHHHHHHHHhCCCCCcceEEEEEE-----ECCEEE
Confidence 5899999999999999999999999999999986432 2334567889999999999999999999984 335899
Q ss_pred EEEecCC-cCHHHHHHhC--CCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCCC
Q 007541 104 VVFELME-SDLHQVIKAN--DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT 180 (599)
Q Consensus 104 lV~E~~~-g~L~~~i~~~--~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~ 180 (599)
+||||+. ++|.+++... ..+++..+..++.||+.||.|||++||+|+||||+|||++.++.++|+|||+++......
T Consensus 75 lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~ 154 (255)
T cd08219 75 IVMEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPG 154 (255)
T ss_pred EEEeeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEECCCCcEEEcccCcceeecccc
Confidence 9999998 5899988653 358999999999999999999999999999999999999999999999999997653222
Q ss_pred CCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHhh
Q 007541 181 PTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVCL 260 (599)
Q Consensus 181 ~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~~ 260 (599)
. ......++..|+|||++.+ ..++.++|+||+||++++|++|..||...+....+..+.. +
T Consensus 155 ~---~~~~~~~~~~~~aPE~~~~--~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~--~------------ 215 (255)
T cd08219 155 A---YACTYVGTPYYVPPEIWEN--MPYNNKSDIWSLGCILYELCTLKHPFQANSWKNLILKVCQ--G------------ 215 (255)
T ss_pred c---ccccccCCccccCHHHHcc--CCcCchhhhhhhchhheehhhccCCCCCCCHHHHHHHHhc--C------------
Confidence 1 1234578899999999876 5789999999999999999999999987654333222211 0
Q ss_pred hhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHhcc
Q 007541 261 LLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLA 340 (599)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL~ 340 (599)
. ........+..+.+||.+||+
T Consensus 216 -------------------------------------------------------~---~~~~~~~~~~~~~~li~~~l~ 237 (255)
T cd08219 216 -------------------------------------------------------S---YKPLPSHYSYELRSLIKQMFK 237 (255)
T ss_pred -------------------------------------------------------C---CCCCCcccCHHHHHHHHHHHh
Confidence 0 001112456789999999999
Q ss_pred cCCCCCCCHHHHhcC
Q 007541 341 FEPKDRPTAEEALAD 355 (599)
Q Consensus 341 ~DP~~RpTa~e~L~H 355 (599)
.||.+|||+.++|+-
T Consensus 238 ~~P~~Rp~~~~il~~ 252 (255)
T cd08219 238 RNPRSRPSATTILSR 252 (255)
T ss_pred CCcccCCCHHHHhhc
Confidence 999999999999863
No 238
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=7.1e-39 Score=331.02 Aligned_cols=260 Identities=29% Similarity=0.487 Sum_probs=211.3
Q ss_pred CCCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCc
Q 007541 21 EGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFK 100 (599)
Q Consensus 21 ~~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~ 100 (599)
..++|++.+.||+|+||+||++.+..+++.||+|.+... .....+.+.+|+.+++.++||||+++++.+.. ..
T Consensus 17 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~--~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~-----~~ 89 (293)
T cd06647 17 PKKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQ--QQPKKELIINEILVMRENKHPNIVNYLDSYLV-----GD 89 (293)
T ss_pred chhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccc--cchHHHHHHHHHHHHhhcCCCCeeehhheeee-----CC
Confidence 358999999999999999999999999999999998642 22345678899999999999999999999854 34
Q ss_pred cEEEEEecCC-cCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCC
Q 007541 101 DIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFND 179 (599)
Q Consensus 101 ~iylV~E~~~-g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~ 179 (599)
..|+|+||+. ++|.+++... .+++..+..++.||+.||.|||++|++|+||||+||+++.++.+||+|||++......
T Consensus 90 ~~~lv~e~~~~~~L~~~~~~~-~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~ 168 (293)
T cd06647 90 ELWVVMEYLAGGSLTDVVTET-CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE 168 (293)
T ss_pred cEEEEEecCCCCcHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEEcCCCCEEEccCcceeccccc
Confidence 7899999998 5999988764 5889999999999999999999999999999999999999999999999998754322
Q ss_pred CCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHh
Q 007541 180 TPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVC 259 (599)
Q Consensus 180 ~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~ 259 (599)
.. ......++..|+|||.+.. ..++.++|+||+||++++|++|+.||...+...++..+.. .+
T Consensus 169 ~~---~~~~~~~~~~y~~PE~~~~--~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~-~~----------- 231 (293)
T cd06647 169 QS---KRSTMVGTPYWMAPEVVTR--KAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIAT-NG----------- 231 (293)
T ss_pred cc---ccccccCChhhcCchhhcc--CCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheeehhc-CC-----------
Confidence 11 1234468889999999866 5788999999999999999999999987654332211100 00
Q ss_pred hhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHhc
Q 007541 260 LLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERML 339 (599)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL 339 (599)
.+.......++..+.+||.+||
T Consensus 232 ----------------------------------------------------------~~~~~~~~~~~~~l~~li~~~l 253 (293)
T cd06647 232 ----------------------------------------------------------TPELQNPEKLSAIFRDFLNRCL 253 (293)
T ss_pred ----------------------------------------------------------CCCCCCccccCHHHHHHHHHHc
Confidence 0000111235677999999999
Q ss_pred ccCCCCCCCHHHHhcCccccCccc
Q 007541 340 AFEPKDRPTAEEALADPYFKGLAK 363 (599)
Q Consensus 340 ~~DP~~RpTa~e~L~HP~f~~~~~ 363 (599)
..||.+||++.++|.||||+....
T Consensus 254 ~~~p~~Rp~~~~il~h~~~~~~~~ 277 (293)
T cd06647 254 EMDVEKRGSAKELLQHPFLKIAKP 277 (293)
T ss_pred cCChhhCcCHHHHhcCHHHhcCcc
Confidence 999999999999999999987643
No 239
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=2.6e-39 Score=339.58 Aligned_cols=303 Identities=19% Similarity=0.217 Sum_probs=205.6
Q ss_pred EEEeec--CceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEEEEE
Q 007541 29 EVIGKG--SYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVVF 106 (599)
Q Consensus 29 ~~LG~G--~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~iylV~ 106 (599)
..||.| +||+||+|.+..+|+.||||++..........+.+.+|+.+++.++||||+++++++.. ...+|+||
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~-----~~~~~~v~ 78 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTT-----GSWLWVIS 78 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEec-----CCceEEEE
Confidence 456666 99999999999999999999987544444455778899999999999999999999954 34789999
Q ss_pred ecCC-cCHHHHHHhC--CCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCCCC-C
Q 007541 107 ELME-SDLHQVIKAN--DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTP-T 182 (599)
Q Consensus 107 E~~~-g~L~~~i~~~--~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~~-~ 182 (599)
||+. ++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+|++||+.+........ .
T Consensus 79 e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~ 158 (328)
T cd08226 79 PFMAYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKA 158 (328)
T ss_pred ecccCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCccc
Confidence 9999 5999988764 3589999999999999999999999999999999999999999999999986643321111 1
Q ss_pred ccc---ccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHh
Q 007541 183 AIF---WTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVC 259 (599)
Q Consensus 183 ~~~---~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~ 259 (599)
... .....++..|+|||++.+....++.++||||+||++++|++|++||.+......+..+.......+.+....
T Consensus 159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 236 (328)
T cd08226 159 KVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTF-- 236 (328)
T ss_pred cccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCcccccc--
Confidence 000 011234567999999865334588999999999999999999999988765444333322111111000000
Q ss_pred hhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHH-HHHhcccCCCCCCCCCCCCCCHHHHHHHHHh
Q 007541 260 LLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARR-YLSSMRKKKPIPFSQKFPNANPLALRLLERM 338 (599)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~m 338 (599)
......+..-. ..+.. .+....... ....+.. ...-.......++.+.+||.+|
T Consensus 237 ~~~~~~~~~~~-----------------~~~~~------~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~ 291 (328)
T cd08226 237 PCEESRMKNSQ-----------------SGVDS------GIGESVVAAGMTQTMTS--ERLRTPSSKTFSPAFQNLVELC 291 (328)
T ss_pred chhhhhhccch-----------------hhhhc------ccccchhcccccccccc--ccccchhhhhhhHHHHHHHHHH
Confidence 00000000000 00000 000000000 0000000 0000011123567899999999
Q ss_pred cccCCCCCCCHHHHhcCccccCccc
Q 007541 339 LAFEPKDRPTAEEALADPYFKGLAK 363 (599)
Q Consensus 339 L~~DP~~RpTa~e~L~HP~f~~~~~ 363 (599)
|++||.+|||+.|+|+||||.....
T Consensus 292 l~~dP~~Rpta~e~l~~~~~~~~~~ 316 (328)
T cd08226 292 LQQDPEKRPSASSLLSHAFFKQVKE 316 (328)
T ss_pred ccCCcccCCCHHHHhhCHHHHHHHH
Confidence 9999999999999999999987654
No 240
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=1.4e-38 Score=322.60 Aligned_cols=249 Identities=22% Similarity=0.437 Sum_probs=202.6
Q ss_pred CCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCcc
Q 007541 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKD 101 (599)
Q Consensus 22 ~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~ 101 (599)
...|.+.+.||+|+||+||+|.+..+++.||+|++... ......+.+|+.+|+.++|+||+++++++.. ...
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~ 76 (263)
T cd05052 5 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED---TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR-----EPP 76 (263)
T ss_pred hHHeEEeeecCCcccceEEEEEEecCCceEEEEEecCC---chHHHHHHHHHHHHHhCCCCChhheEEEEcC-----CCC
Confidence 35699999999999999999999999999999998642 2345678899999999999999999999843 347
Q ss_pred EEEEEecCC-cCHHHHHHhC--CCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccC
Q 007541 102 IYVVFELME-SDLHQVIKAN--DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFN 178 (599)
Q Consensus 102 iylV~E~~~-g~L~~~i~~~--~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~ 178 (599)
+|+||||+. ++|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++...+
T Consensus 77 ~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~ 156 (263)
T cd05052 77 FYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG 156 (263)
T ss_pred cEEEEEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCcEEeCCCcccccccc
Confidence 899999998 6999998764 3589999999999999999999999999999999999999999999999999986543
Q ss_pred CCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHh-CCCCCCCCChhhHHHHHHHhcCCCCHHHHHH
Q 007541 179 DTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLLGTPSPEAIAR 257 (599)
Q Consensus 179 ~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLlt-G~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~ 257 (599)
..... ......+..|+|||.+.+ ..++.++|||||||++++|++ |..||++.+..+....+....
T Consensus 157 ~~~~~--~~~~~~~~~y~aPE~~~~--~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~---------- 222 (263)
T cd05052 157 DTYTA--HAGAKFPIKWTAPESLAY--NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKGY---------- 222 (263)
T ss_pred ceeec--cCCCCCccccCCHHHhcc--CCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCC----------
Confidence 22111 112234567999998876 678899999999999999998 999998876544332221100
Q ss_pred HhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHH
Q 007541 258 VCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLER 337 (599)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~ 337 (599)
.. ......++.+.+||.+
T Consensus 223 -----------------------------------------------------------~~---~~~~~~~~~~~~li~~ 240 (263)
T cd05052 223 -----------------------------------------------------------RM---ERPEGCPPKVYELMRA 240 (263)
T ss_pred -----------------------------------------------------------CC---CCCCCCCHHHHHHHHH
Confidence 00 1113467889999999
Q ss_pred hcccCCCCCCCHHHHhc
Q 007541 338 MLAFEPKDRPTAEEALA 354 (599)
Q Consensus 338 mL~~DP~~RpTa~e~L~ 354 (599)
||+.||++|||+.++++
T Consensus 241 cl~~~p~~Rp~~~~l~~ 257 (263)
T cd05052 241 CWQWNPSDRPSFAEIHQ 257 (263)
T ss_pred HccCCcccCCCHHHHHH
Confidence 99999999999999976
No 241
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=6.2e-39 Score=328.10 Aligned_cols=252 Identities=23% Similarity=0.364 Sum_probs=203.2
Q ss_pred CceEEEEEEeecCceEEEEEEECCCC-----cEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcC
Q 007541 23 SRYKIEEVIGKGSYGVVCSAYDTRTG-----EKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRR 97 (599)
Q Consensus 23 ~rY~i~~~LG~G~~g~V~~a~d~~tg-----~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~ 97 (599)
++|++++.||+|+||.||+|.+...+ ..||+|.+.... .......+.+|+.+|+.++||||+++++++...
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~-~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~--- 80 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENA-EPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKE--- 80 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCC-CHHHHHHHHHHHHHHHhcCCcccceEEEEEcCC---
Confidence 47899999999999999999987665 789999986432 223345688999999999999999999998433
Q ss_pred CCccEEEEEecCC-cCHHHHHHhC----------------CCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeC
Q 007541 98 EFKDIYVVFELME-SDLHQVIKAN----------------DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILAN 160 (599)
Q Consensus 98 ~~~~iylV~E~~~-g~L~~~i~~~----------------~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~ 160 (599)
..+|+||||+. ++|.+++... ..+++..+..++.||+.||.|||++||+|+||||+|||++
T Consensus 81 --~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~~ 158 (283)
T cd05048 81 --QPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLVG 158 (283)
T ss_pred --CceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccceEEEc
Confidence 46899999998 6999999764 4578899999999999999999999999999999999999
Q ss_pred CCCceeeeccCccccccCCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHh-CCCCCCCCChhhH
Q 007541 161 ADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQ 239 (599)
Q Consensus 161 ~~~~lKL~DFGlA~~~~~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLlt-G~~pF~g~~~~~~ 239 (599)
.++.+||+|||+++....... ........++..|+|||.+.. ..++.++|||||||++|+|++ |..||.+.+..+.
T Consensus 159 ~~~~~~L~dfg~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~--~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~~ 235 (283)
T cd05048 159 EGLTVKISDFGLSRDIYSADY-YRVQSKSLLPVRWMPPEAILY--GKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQEV 235 (283)
T ss_pred CCCcEEECCCcceeecccccc-ccccCCCcccccccCHHHhcc--CcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHHH
Confidence 999999999999976432211 111234466888999998876 578999999999999999998 9999987665443
Q ss_pred HHHHHHhcCCCCHHHHHHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCC
Q 007541 240 LDIMTDLLGTPSPEAIARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIP 319 (599)
Q Consensus 240 l~~I~~~lG~p~~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (599)
...|.. ...
T Consensus 236 ~~~i~~---------------------------------------------------------------------~~~-- 244 (283)
T cd05048 236 IEMIRS---------------------------------------------------------------------RQL-- 244 (283)
T ss_pred HHHHHc---------------------------------------------------------------------CCc--
Confidence 322221 000
Q ss_pred CCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 007541 320 FSQKFPNANPLALRLLERMLAFEPKDRPTAEEALAD 355 (599)
Q Consensus 320 ~~~~~~~~s~~a~dLL~~mL~~DP~~RpTa~e~L~H 355 (599)
.......++.+.+|+.+||+.||.+|||+.|++++
T Consensus 245 -~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~ 279 (283)
T cd05048 245 -LPCPEDCPARVYALMIECWNEIPARRPRFKDIHTR 279 (283)
T ss_pred -CCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 01123567889999999999999999999999875
No 242
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=100.00 E-value=1e-38 Score=365.54 Aligned_cols=148 Identities=24% Similarity=0.409 Sum_probs=133.1
Q ss_pred CCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcc-cChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCc
Q 007541 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIF-EHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFK 100 (599)
Q Consensus 22 ~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~-~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~ 100 (599)
-++|.+++.||+|+||+||+|++..+++.||||+++... ........+.+|+.+++.++|+||++++.++. ...
T Consensus 3 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~-----~~~ 77 (669)
T cd05610 3 IEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQ-----SAN 77 (669)
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEE-----ECC
Confidence 368999999999999999999999999999999997432 23334567889999999999999999998884 335
Q ss_pred cEEEEEecCC-cCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccc
Q 007541 101 DIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLAR 174 (599)
Q Consensus 101 ~iylV~E~~~-g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~ 174 (599)
++||||||+. ++|.+++...+.+++..++.|+.||+.||.|||++||+||||||+|||++.++.+||+|||+++
T Consensus 78 ~~~lVmEy~~g~~L~~li~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFGls~ 152 (669)
T cd05610 78 NVYLVMEYLIGGDVKSLLHIYGYFDEEMAVKYISEVALALDYLHRHGIIHRDLKPDNMLISNEGHIKLTDFGLSK 152 (669)
T ss_pred EEEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence 7999999997 6999999888889999999999999999999999999999999999999999999999999986
No 243
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=5.6e-39 Score=333.92 Aligned_cols=284 Identities=23% Similarity=0.294 Sum_probs=202.0
Q ss_pred CceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEEEEEecCC-cCH
Q 007541 35 SYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVVFELME-SDL 113 (599)
Q Consensus 35 ~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~iylV~E~~~-g~L 113 (599)
++|.||.++++.+++.||||+++..........++.+|+.+|+.++|+||+++++++... ..+|++|||+. ++|
T Consensus 12 ~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~-----~~~~~~~e~~~~~~l 86 (314)
T cd08216 12 DLMIVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVD-----SELYVVSPLMAYGSC 86 (314)
T ss_pred CCceEEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecC-----CeEEEEEeccCCCCH
Confidence 557778888888999999999976434445667899999999999999999999998543 46899999999 689
Q ss_pred HHHHHhC--CCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCCCCC----ccccc
Q 007541 114 HQVIKAN--DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPT----AIFWT 187 (599)
Q Consensus 114 ~~~i~~~--~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~~~----~~~~t 187 (599)
.+++... ..+++..++.+++||+.||+|||++||+||||||+|||++.++.+||+|||.+......... .....
T Consensus 87 ~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~ 166 (314)
T cd08216 87 EDLLKTHFPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVHDFPK 166 (314)
T ss_pred HHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEecCCceEEecCccceeeccccccccccccccc
Confidence 9998753 46899999999999999999999999999999999999999999999999998754322111 11112
Q ss_pred ccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHhhhhhhhhc
Q 007541 188 DYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVCLLLNIIWC 267 (599)
Q Consensus 188 ~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~~~~~~~~~ 267 (599)
...++..|+|||++......|+.++||||+||++++|++|+.||........+. ....|..... +.. ..+.
T Consensus 167 ~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~--~~~~~~~~~~-~~~------~~~~ 237 (314)
T cd08216 167 SSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLL--EKVRGTVPCL-LDK------STYP 237 (314)
T ss_pred cccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHH--HHHhccCccc-ccc------Cchh
Confidence 345778899999986533468899999999999999999999998765433221 1122221110 000 0000
Q ss_pred CCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCC
Q 007541 268 GYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRP 347 (599)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL~~DP~~Rp 347 (599)
............ ..... .....-......++..+.+||.+||.+||.+||
T Consensus 238 ~~~~~~~~~~~~--------------------~~~~~----------~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp 287 (314)
T cd08216 238 LYEDSMSQSRSS--------------------NEHPN----------NRDSVDHPYTRTFSEHFHQFVELCLQRDPESRP 287 (314)
T ss_pred hhcCCcCccccc--------------------ccccc----------hhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCc
Confidence 000000000000 00000 000000001123457789999999999999999
Q ss_pred CHHHHhcCccccCcc
Q 007541 348 TAEEALADPYFKGLA 362 (599)
Q Consensus 348 Ta~e~L~HP~f~~~~ 362 (599)
|++|+|+||||+.+.
T Consensus 288 t~~~ll~~p~~~~~~ 302 (314)
T cd08216 288 SASQLLNHSFFKQCK 302 (314)
T ss_pred CHHHHhcCchHhhhc
Confidence 999999999999775
No 244
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=6.5e-40 Score=351.21 Aligned_cols=268 Identities=28% Similarity=0.479 Sum_probs=223.1
Q ss_pred CcccccccCCCCce-EEEEEEeecCceEEEEEEECCCCcEEEEEEec--CcccChhhHHHHHHHHHHHHhcCCCCccccc
Q 007541 12 DVDFFTEYGEGSRY-KIEEVIGKGSYGVVCSAYDTRTGEKVAIKKIN--DIFEHVSDATRILREIKLLRLLRHPDIVEIK 88 (599)
Q Consensus 12 ~~~~~~~~~~~~rY-~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~--~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~ 88 (599)
+-..+.+-...+|| +...+||+|+|-+||+|.|..+|..||.--++ .........+++..|+.+|+.|+|+||++++
T Consensus 28 ~~~~~ve~~p~gRy~k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy 107 (632)
T KOG0584|consen 28 DESEFVEKDPTGRYLKFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFY 107 (632)
T ss_pred ccccccccCCCCceeehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeee
Confidence 34455566677888 45688999999999999999999999986554 3444556678999999999999999999999
Q ss_pred eeecCCCcCCCccEEEEEecCC-cCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCc--eEeecCCCCcEEeCCC-Cc
Q 007541 89 HILLPPSRREFKDIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTAN--VFHRDLKPKNILANAD-CK 164 (599)
Q Consensus 89 ~v~~~~s~~~~~~iylV~E~~~-g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~g--IvHrDLKP~NILv~~~-~~ 164 (599)
+.|.+... ..+.+|+|+|. |+|.++++..++++...++.|++|||+||.|||++. |||||||-+||+|+.+ |.
T Consensus 108 ~SW~d~~n---~~in~iTEL~TSGtLr~Y~kk~~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~G~ 184 (632)
T KOG0584|consen 108 DSWVDTDN---KTINFITELFTSGTLREYRKKHRRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNLGE 184 (632)
T ss_pred eheecCCC---ceeeeeeecccCCcHHHHHHHhccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCcCc
Confidence 99976542 67999999999 899999999999999999999999999999999997 9999999999999986 99
Q ss_pred eeeeccCccccccCCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHH
Q 007541 165 LKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMT 244 (599)
Q Consensus 165 lKL~DFGlA~~~~~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~ 244 (599)
|||+|+|||....... ....+|||.|||||++. ..|+..+||||||+++.||+|+..||.......|+.+-.
T Consensus 185 VKIGDLGLAtl~r~s~-----aksvIGTPEFMAPEmYE---E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV 256 (632)
T KOG0584|consen 185 VKIGDLGLATLLRKSH-----AKSVIGTPEFMAPEMYE---ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKV 256 (632)
T ss_pred eeecchhHHHHhhccc-----cceeccCccccChHHHh---hhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHH
Confidence 9999999998764332 24569999999999986 489999999999999999999999998766554443321
Q ss_pred HhcCCCCHHHHHHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCC
Q 007541 245 DLLGTPSPEAIARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKF 324 (599)
Q Consensus 245 ~~lG~p~~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (599)
...-.|. .|+.
T Consensus 257 --~SGiKP~-----------------------------------------------------------------sl~k-- 267 (632)
T KOG0584|consen 257 --TSGIKPA-----------------------------------------------------------------ALSK-- 267 (632)
T ss_pred --HcCCCHH-----------------------------------------------------------------Hhhc--
Confidence 1111111 1111
Q ss_pred CCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccccCc
Q 007541 325 PNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGL 361 (599)
Q Consensus 325 ~~~s~~a~dLL~~mL~~DP~~RpTa~e~L~HP~f~~~ 361 (599)
--++++++||++||.. ..+|+|+.|+|.||||+.-
T Consensus 268 -V~dPevr~fIekCl~~-~~~R~sa~eLL~d~Ff~~d 302 (632)
T KOG0584|consen 268 -VKDPEVREFIEKCLAT-KSERLSAKELLKDPFFDED 302 (632)
T ss_pred -cCCHHHHHHHHHHhcC-chhccCHHHHhhChhhccc
Confidence 2368899999999999 9999999999999999863
No 245
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=100.00 E-value=9.4e-39 Score=327.44 Aligned_cols=251 Identities=27% Similarity=0.391 Sum_probs=196.0
Q ss_pred EEeecCceEEEEEEECCCCcEEEEEEecCcccC-hhhHHHHHHHH---HHHHhcCCCCccccceeecCCCcCCCccEEEE
Q 007541 30 VIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEH-VSDATRILREI---KLLRLLRHPDIVEIKHILLPPSRREFKDIYVV 105 (599)
Q Consensus 30 ~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~-~~~~~~i~rEi---~iL~~l~HpnIv~l~~v~~~~s~~~~~~iylV 105 (599)
+||+|+||.||+|.+..+++.||||++...... .........|. .+++...||+|+.+++++.. ...+|+|
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-----~~~~~~v 75 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHT-----PDKLSFI 75 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeec-----CCEEEEE
Confidence 489999999999999999999999998653222 12222233343 34455679999999998843 3479999
Q ss_pred EecCC-cCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCCCCCcc
Q 007541 106 FELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAI 184 (599)
Q Consensus 106 ~E~~~-g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~~~~~ 184 (599)
|||+. ++|.+++...+.+++..++.++.||+.||.|||+.+|+||||||+|||++.++.+||+|||++.......
T Consensus 76 ~e~~~g~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~---- 151 (278)
T cd05606 76 LDLMNGGDLHYHLSQHGVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK---- 151 (278)
T ss_pred EecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEECCCCCEEEccCcCccccCccC----
Confidence 99998 5899999888889999999999999999999999999999999999999999999999999987543221
Q ss_pred cccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHhhhhhh
Q 007541 185 FWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVCLLLNI 264 (599)
Q Consensus 185 ~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~~~~~~ 264 (599)
....+++..|+|||++... ..++.++||||+||++++|++|+.||.+..........
T Consensus 152 -~~~~~~~~~y~aPE~~~~~-~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~--------------------- 208 (278)
T cd05606 152 -PHASVGTHGYMAPEVLQKG-VAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEID--------------------- 208 (278)
T ss_pred -CcCcCCCcCCcCcHHhcCC-CCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHH---------------------
Confidence 1234789999999998642 46889999999999999999999999765321110000
Q ss_pred hhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHhcccCCC
Q 007541 265 IWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPK 344 (599)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL~~DP~ 344 (599)
... ..... ......+..+.+||.+||..||.
T Consensus 209 ------------------------------------------~~~----~~~~~---~~~~~~s~~~~~li~~~l~~~p~ 239 (278)
T cd05606 209 ------------------------------------------RMT----LTMAV---ELPDSFSPELRSLLEGLLQRDVN 239 (278)
T ss_pred ------------------------------------------HHh----hccCC---CCCCcCCHHHHHHHHHHhhcCHH
Confidence 000 00000 11124578899999999999999
Q ss_pred CCC-----CHHHHhcCccccCc
Q 007541 345 DRP-----TAEEALADPYFKGL 361 (599)
Q Consensus 345 ~Rp-----Ta~e~L~HP~f~~~ 361 (599)
+|+ ++.++++||||++.
T Consensus 240 ~R~~~~~~~~~~ll~~~~~~~~ 261 (278)
T cd05606 240 RRLGCLGRGAQEVKEHPFFRSL 261 (278)
T ss_pred hccCCCCCCHHHHHhCccccCC
Confidence 999 99999999999875
No 246
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=1.8e-38 Score=322.32 Aligned_cols=251 Identities=29% Similarity=0.449 Sum_probs=198.8
Q ss_pred EEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEEEEEe
Q 007541 28 EEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVVFE 107 (599)
Q Consensus 28 ~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~iylV~E 107 (599)
...||+|+||+||+|.+..++..||+|.+... .......+.+|+.+++.++|+||+++++++.. ...+|+|+|
T Consensus 13 ~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-----~~~~~lv~e 85 (268)
T cd06624 13 RVVLGKGTYGIVYAARDLSTQVRIAIKEIPER--DSRYVQPLHEEIALHSYLKHRNIVQYLGSDSE-----NGFFKIFME 85 (268)
T ss_pred eEEEecCCceEEEEeEecCCCcEEEEEEecCC--CHHHHHHHHHHHHHHHhcCCCCeeeeeeeecc-----CCEEEEEEe
Confidence 35799999999999999999999999988643 23355678899999999999999999999843 357999999
Q ss_pred cCC-cCHHHHHHhC-CCC--CHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCC-CCceeeeccCccccccCCCCC
Q 007541 108 LME-SDLHQVIKAN-DDL--TPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANA-DCKLKICDFGLARVAFNDTPT 182 (599)
Q Consensus 108 ~~~-g~L~~~i~~~-~~l--se~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~-~~~lKL~DFGlA~~~~~~~~~ 182 (599)
|+. ++|.+++... ..+ ++..+..++.||+.||.|||++||+||||||+||+++. ++.+||+|||++.........
T Consensus 86 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~~~ 165 (268)
T cd06624 86 QVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGINPC 165 (268)
T ss_pred cCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCeEEEecchhheecccCCCc
Confidence 998 5999998764 445 88899999999999999999999999999999999986 678999999999765332221
Q ss_pred cccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHhhhh
Q 007541 183 AIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVCLLL 262 (599)
Q Consensus 183 ~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~~~~ 262 (599)
.....++..|+|||++......++.++||||+||++++|++|+.||.............
T Consensus 166 ---~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~~------------------ 224 (268)
T cd06624 166 ---TETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKV------------------ 224 (268)
T ss_pred ---cccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhhh------------------
Confidence 22345788999999986532458899999999999999999999996532111000000
Q ss_pred hhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHhcccC
Q 007541 263 NIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFE 342 (599)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL~~D 342 (599)
.... .........++.+.+||.+||+.|
T Consensus 225 ------------------------------------------------~~~~----~~~~~~~~~~~~~~~li~~~l~~~ 252 (268)
T cd06624 225 ------------------------------------------------GMFK----IHPEIPESLSAEAKNFILRCFEPD 252 (268)
T ss_pred ------------------------------------------------hhhc----cCCCCCcccCHHHHHHHHHHcCCC
Confidence 0000 000112346788999999999999
Q ss_pred CCCCCCHHHHhcCccc
Q 007541 343 PKDRPTAEEALADPYF 358 (599)
Q Consensus 343 P~~RpTa~e~L~HP~f 358 (599)
|.+|||+.|++.||||
T Consensus 253 p~~Rpt~~~ll~~~~~ 268 (268)
T cd06624 253 PDKRASAHDLLQDPFL 268 (268)
T ss_pred chhCCCHHHHHhCCCC
Confidence 9999999999999997
No 247
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=5.5e-39 Score=328.33 Aligned_cols=257 Identities=26% Similarity=0.390 Sum_probs=209.7
Q ss_pred CCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCcc
Q 007541 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKD 101 (599)
Q Consensus 22 ~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~ 101 (599)
...|++++.||.|+||.||+|.+..++..||||++.... .......+.+|+.+++.+.|+||+++++++.. ...
T Consensus 3 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~ 76 (277)
T cd06640 3 EELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEE-AEDEIEDIQQEITVLSQCDSPYVTKYYGSYLK-----GTK 76 (277)
T ss_pred HHhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccc-cHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEE-----CCE
Confidence 356888999999999999999999999999999986432 23445678899999999999999999999843 357
Q ss_pred EEEEEecCC-cCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCCC
Q 007541 102 IYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT 180 (599)
Q Consensus 102 iylV~E~~~-g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~ 180 (599)
+|+||||++ ++|.+++.. +.+++..+..++.||+.||.|||+.+++|+||+|+||+++.++.++|+|||++.......
T Consensus 77 ~~lv~e~~~~~~L~~~i~~-~~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~ 155 (277)
T cd06640 77 LWIIMEYLGGGSALDLLRA-GPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ 155 (277)
T ss_pred EEEEEecCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEEcCCCCEEEcccccceeccCCc
Confidence 999999998 589998875 469999999999999999999999999999999999999999999999999997653322
Q ss_pred CCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHhh
Q 007541 181 PTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVCL 260 (599)
Q Consensus 181 ~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~~ 260 (599)
. ......++..|+|||++.+ ..++.++|+|||||++++|++|..||.+.+.......+..
T Consensus 156 ~---~~~~~~~~~~y~apE~~~~--~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~--------------- 215 (277)
T cd06640 156 I---KRNTFVGTPFWMAPEVIQQ--SAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPK--------------- 215 (277)
T ss_pred c---ccccccCcccccCHhHhcc--CCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhhhhhc---------------
Confidence 1 1133467889999999876 5788999999999999999999999976553322211100
Q ss_pred hhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHhcc
Q 007541 261 LLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLA 340 (599)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL~ 340 (599)
.. ........+..+.+||.+||+
T Consensus 216 ------------------------------------------------------~~---~~~~~~~~~~~~~~li~~~l~ 238 (277)
T cd06640 216 ------------------------------------------------------NN---PPTLTGEFSKPFKEFIDACLN 238 (277)
T ss_pred ------------------------------------------------------CC---CCCCchhhhHHHHHHHHHHcc
Confidence 00 011123356778999999999
Q ss_pred cCCCCCCCHHHHhcCccccCcc
Q 007541 341 FEPKDRPTAEEALADPYFKGLA 362 (599)
Q Consensus 341 ~DP~~RpTa~e~L~HP~f~~~~ 362 (599)
.||++|||+.++|+||||....
T Consensus 239 ~~p~~Rp~~~~il~~~~~~~~~ 260 (277)
T cd06640 239 KDPSFRPTAKELLKHKFIVKNA 260 (277)
T ss_pred cCcccCcCHHHHHhChHhhhcc
Confidence 9999999999999999997543
No 248
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00 E-value=8.8e-39 Score=322.95 Aligned_cols=250 Identities=26% Similarity=0.412 Sum_probs=199.5
Q ss_pred EEEeecCceEEEEEEECCCCcEEEEEEecCcccC-hhhHHHHHHHHHHH-HhcCCCCccccceeecCCCcCCCccEEEEE
Q 007541 29 EVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEH-VSDATRILREIKLL-RLLRHPDIVEIKHILLPPSRREFKDIYVVF 106 (599)
Q Consensus 29 ~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~-~~~~~~i~rEi~iL-~~l~HpnIv~l~~v~~~~s~~~~~~iylV~ 106 (599)
+.||.|+||.||+|.+..+|+.||||.+...... ......+..|..++ ..+.|+||+++++++. ....+|+|+
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~-----~~~~~~lv~ 76 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQ-----SKDYLYLVM 76 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEE-----cCCeEEEEE
Confidence 5699999999999999999999999998643221 12233445565554 4457999999999984 335799999
Q ss_pred ecCC-cCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCCCCCccc
Q 007541 107 ELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIF 185 (599)
Q Consensus 107 E~~~-g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~~~~~~ 185 (599)
||+. ++|.+++...+.+++..+..++.||+.||.|||+.||+|+||+|+|||++.++.+||+|||+++....
T Consensus 77 e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~------- 149 (260)
T cd05611 77 EYLNGGDCASLIKTLGGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE------- 149 (260)
T ss_pred eccCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEeecccceeccc-------
Confidence 9998 59999998888899999999999999999999999999999999999999999999999999875432
Q ss_pred ccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHhhhhhhh
Q 007541 186 WTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVCLLLNII 265 (599)
Q Consensus 186 ~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~~~~~~~ 265 (599)
.....++..|+|||.+.+ ..++.++||||+|||+++|++|..||.+.+.......+...
T Consensus 150 ~~~~~~~~~y~~pe~~~~--~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~------------------- 208 (260)
T cd05611 150 NKKFVGTPDYLAPETILG--VGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSR------------------- 208 (260)
T ss_pred cccCCCCcCccChhhhcC--CCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhc-------------------
Confidence 123467889999999876 45889999999999999999999999876543332222110
Q ss_pred hcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCC
Q 007541 266 WCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKD 345 (599)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL~~DP~~ 345 (599)
...........+++.+.+||.+||+.||.+
T Consensus 209 --------------------------------------------------~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~ 238 (260)
T cd05611 209 --------------------------------------------------RINWPEEVKEFCSPEAVDLINRLLCMDPAK 238 (260)
T ss_pred --------------------------------------------------ccCCCCcccccCCHHHHHHHHHHccCCHHH
Confidence 000001122356888999999999999999
Q ss_pred CCC---HHHHhcCccccCc
Q 007541 346 RPT---AEEALADPYFKGL 361 (599)
Q Consensus 346 RpT---a~e~L~HP~f~~~ 361 (599)
||| ++|+|.||||+.+
T Consensus 239 R~~~~~~~~~l~~~~~~~~ 257 (260)
T cd05611 239 RLGANGYQEIKSHPFFKSI 257 (260)
T ss_pred ccCCCcHHHHHcChHhhcC
Confidence 995 5899999999865
No 249
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=2.5e-38 Score=316.84 Aligned_cols=253 Identities=32% Similarity=0.537 Sum_probs=211.6
Q ss_pred ceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEE
Q 007541 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIY 103 (599)
Q Consensus 24 rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~iy 103 (599)
+|++.+.||+|++|.||+|.+..+++.||+|.+............+.+|+.+++.++|+|++++++++.. ...+|
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-----~~~~~ 75 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIET-----SDSLY 75 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEe-----CCEEE
Confidence 6899999999999999999999999999999997654443556788999999999999999999999843 35799
Q ss_pred EEEecCC-cCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCCCCC
Q 007541 104 VVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPT 182 (599)
Q Consensus 104 lV~E~~~-g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~~~ 182 (599)
+|||+++ ++|.+++...+.+++..++.++.||+.||.|||+.||+||||||+||+++.++.+||+|||++.........
T Consensus 76 ~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~ 155 (254)
T cd06627 76 IILEYAENGSLRQIIKKFGPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKD 155 (254)
T ss_pred EEEecCCCCcHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEECCCCCEEEeccccceecCCCccc
Confidence 9999998 499999988888999999999999999999999999999999999999999999999999999876443321
Q ss_pred cccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHhhhh
Q 007541 183 AIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVCLLL 262 (599)
Q Consensus 183 ~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~~~~ 262 (599)
.....++..|+|||.+.+ ..++.++||||+|+++++|++|+.||...+.......+.
T Consensus 156 ---~~~~~~~~~y~~pe~~~~--~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~~~------------------ 212 (254)
T cd06627 156 ---DASVVGTPYWMAPEVIEM--SGASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFRIV------------------ 212 (254)
T ss_pred ---ccccccchhhcCHhhhcC--CCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHh------------------
Confidence 233467889999999876 458899999999999999999999997544322211110
Q ss_pred hhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHhcccC
Q 007541 263 NIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFE 342 (599)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL~~D 342 (599)
.. .........++.+.+||.+||..|
T Consensus 213 ---------------------------------------------------~~---~~~~~~~~~~~~~~~~i~~~l~~~ 238 (254)
T cd06627 213 ---------------------------------------------------QD---DHPPLPEGISPELKDFLMQCFQKD 238 (254)
T ss_pred ---------------------------------------------------cc---CCCCCCCCCCHHHHHHHHHHHhCC
Confidence 00 011122356788999999999999
Q ss_pred CCCCCCHHHHhcCccc
Q 007541 343 PKDRPTAEEALADPYF 358 (599)
Q Consensus 343 P~~RpTa~e~L~HP~f 358 (599)
|++|||+.++|.||||
T Consensus 239 p~~R~~~~~~l~~~~~ 254 (254)
T cd06627 239 PNLRPTAKQLLKHPWI 254 (254)
T ss_pred hhhCcCHHHHhcCCCC
Confidence 9999999999999998
No 250
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=2.4e-39 Score=330.74 Aligned_cols=256 Identities=28% Similarity=0.397 Sum_probs=207.3
Q ss_pred CceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccE
Q 007541 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDI 102 (599)
Q Consensus 23 ~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~i 102 (599)
+.|++++.||+|+||.||+|.+..+++.||+|.+..... ......+.+|+.+++.++|+||+++++.+.. ...+
T Consensus 4 ~~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~ 77 (277)
T cd06642 4 ELFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEA-EDEIEDIQQEITVLSQCDSPYITRYYGSYLK-----GTKL 77 (277)
T ss_pred HHHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccc-hHHHHHHHHHHHHHHcCCCCccHhhhccccc-----CCce
Confidence 467788899999999999999999999999999864322 2345678899999999999999999999853 3479
Q ss_pred EEEEecCC-cCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCCCC
Q 007541 103 YVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTP 181 (599)
Q Consensus 103 ylV~E~~~-g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~~ 181 (599)
|+||||++ ++|.+++.. +.+++..++.++.||+.||.|||++||+|+||+|+||+++.++.+||+|||++........
T Consensus 78 ~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~ 156 (277)
T cd06642 78 WIIMEYLGGGSALDLLKP-GPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI 156 (277)
T ss_pred EEEEEccCCCcHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEEeCCCCEEEccccccccccCcch
Confidence 99999999 589888865 4689999999999999999999999999999999999999999999999999976532211
Q ss_pred CcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHhhh
Q 007541 182 TAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVCLL 261 (599)
Q Consensus 182 ~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~~~ 261 (599)
......++..|+|||.+.+ ..++.++|+||+||++++|++|+.||...........+.
T Consensus 157 ---~~~~~~~~~~y~aPE~~~~--~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~----------------- 214 (277)
T cd06642 157 ---KRNTFVGTPFWMAPEVIKQ--SAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIP----------------- 214 (277)
T ss_pred ---hhhcccCcccccCHHHhCc--CCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHHhhhh-----------------
Confidence 1123467889999999876 578899999999999999999999986543222111100
Q ss_pred hhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHhccc
Q 007541 262 LNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAF 341 (599)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL~~ 341 (599)
... ........+..+.+||.+||+.
T Consensus 215 ----------------------------------------------------~~~---~~~~~~~~~~~~~~li~~~l~~ 239 (277)
T cd06642 215 ----------------------------------------------------KNS---PPTLEGQYSKPFKEFVEACLNK 239 (277)
T ss_pred ----------------------------------------------------cCC---CCCCCcccCHHHHHHHHHHccC
Confidence 000 0011124567899999999999
Q ss_pred CCCCCCCHHHHhcCccccCcc
Q 007541 342 EPKDRPTAEEALADPYFKGLA 362 (599)
Q Consensus 342 DP~~RpTa~e~L~HP~f~~~~ 362 (599)
||.+|||+.++|+||||..+.
T Consensus 240 ~p~~Rp~~~~il~~~~~~~~~ 260 (277)
T cd06642 240 DPRFRPTAKELLKHKFITRYT 260 (277)
T ss_pred CcccCcCHHHHHHhHHHHHHh
Confidence 999999999999999998653
No 251
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=1.8e-38 Score=317.36 Aligned_cols=259 Identities=29% Similarity=0.448 Sum_probs=212.5
Q ss_pred ceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEE
Q 007541 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIY 103 (599)
Q Consensus 24 rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~iy 103 (599)
+|.+.+.||+|++|.||+|.+..+++.|++|++............+.+|+.+++.++|+||+++++.+.... ...+|
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~---~~~~~ 77 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEE---KNTLN 77 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCC---CCeEE
Confidence 588999999999999999999999999999998764443455678889999999999999999999985432 25799
Q ss_pred EEEecCC-cCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCCCCC
Q 007541 104 VVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPT 182 (599)
Q Consensus 104 lV~E~~~-g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~~~ 182 (599)
+|+||+. ++|.+++.....+++..+..++.|++.||.|||+.|++|+||+|+||+++.++.+||+|||.+.........
T Consensus 78 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~ 157 (260)
T cd06606 78 IFLEYVSGGSLSSLLKKFGKLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETG 157 (260)
T ss_pred EEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEcccccEEeccccccc
Confidence 9999996 699999988778999999999999999999999999999999999999999999999999999876543321
Q ss_pred cccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHhhhh
Q 007541 183 AIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVCLLL 262 (599)
Q Consensus 183 ~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~~~~ 262 (599)
.......++..|+|||.+.. ..++.++|||||||++++|++|..||...+. ....+....
T Consensus 158 -~~~~~~~~~~~y~~pE~~~~--~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~--~~~~~~~~~--------------- 217 (260)
T cd06606 158 -EGTGSVRGTPYWMAPEVIRG--EEYGRAADIWSLGCTVIEMATGKPPWSELGN--PMAALYKIG--------------- 217 (260)
T ss_pred -ccccCCCCCccccCHhhhcC--CCCCchhhHHHHHHHHHHHHhCCCCCCCCCc--hHHHHHhcc---------------
Confidence 01133467888999999876 5688999999999999999999999977651 111111100
Q ss_pred hhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHhcccC
Q 007541 263 NIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFE 342 (599)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL~~D 342 (599)
. ...........+..+.+||.+||..|
T Consensus 218 ---------------------------------------------------~--~~~~~~~~~~~~~~l~~~i~~~l~~~ 244 (260)
T cd06606 218 ---------------------------------------------------S--SGEPPEIPEHLSEEAKDFLRKCLRRD 244 (260)
T ss_pred ---------------------------------------------------c--cCCCcCCCcccCHHHHHHHHHhCcCC
Confidence 0 00111222345788999999999999
Q ss_pred CCCCCCHHHHhcCccc
Q 007541 343 PKDRPTAEEALADPYF 358 (599)
Q Consensus 343 P~~RpTa~e~L~HP~f 358 (599)
|.+|||+.|+|.||||
T Consensus 245 p~~Rp~~~~ll~~~~~ 260 (260)
T cd06606 245 PKKRPTADELLQHPFL 260 (260)
T ss_pred hhhCCCHHHHhhCCCC
Confidence 9999999999999997
No 252
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=1e-38 Score=321.39 Aligned_cols=253 Identities=30% Similarity=0.517 Sum_probs=205.4
Q ss_pred EeecCceEEEEEEECCCCcEEEEEEecCccc-ChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEEEEEecC
Q 007541 31 IGKGSYGVVCSAYDTRTGEKVAIKKINDIFE-HVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVVFELM 109 (599)
Q Consensus 31 LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~-~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~iylV~E~~ 109 (599)
||.|+||.||+|.+..+|+.||+|++..... .......+.+|+.+++.++|+||+++++.+. ....+|+|+||+
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~-----~~~~~~lv~e~~ 75 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQ-----GKKNLYLVMEYL 75 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHhee-----cCcEEEEEEecC
Confidence 6899999999999999999999999864322 2244567889999999999999999998874 345799999999
Q ss_pred C-cCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCCCCC-----c
Q 007541 110 E-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPT-----A 183 (599)
Q Consensus 110 ~-g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~~~-----~ 183 (599)
. ++|.+++...+.+++..+..++.||+.||.|||+.||+|+||+|+|||++.++.+||+|||++......... .
T Consensus 76 ~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~ 155 (265)
T cd05579 76 PGGDLASLLENVGSLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDE 155 (265)
T ss_pred CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEcCCCCEEEEecccchhcccCccccccccc
Confidence 8 599999988778999999999999999999999999999999999999999999999999999765432110 1
Q ss_pred ccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHhhhhh
Q 007541 184 IFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVCLLLN 263 (599)
Q Consensus 184 ~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~~~~~ 263 (599)
.......++..|+|||.+.. ..++.++|+|||||++++|++|..||...........+.. +.
T Consensus 156 ~~~~~~~~~~~~~~Pe~~~~--~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~--~~-------------- 217 (265)
T cd05579 156 KEDKRIVGTPDYIAPEVILG--QGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILN--GK-------------- 217 (265)
T ss_pred ccccCcccCccccCHHHhcC--CCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc--CC--------------
Confidence 11234567889999999876 5688999999999999999999999987654433322211 00
Q ss_pred hhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHhcccCC
Q 007541 264 IIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEP 343 (599)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL~~DP 343 (599)
..+.. ....++.+.+||.+||+.||
T Consensus 218 ------------------------------------------------------~~~~~-~~~~~~~~~~~i~~~l~~~p 242 (265)
T cd05579 218 ------------------------------------------------------IEWPE-DVEVSDEAIDLISKLLVPDP 242 (265)
T ss_pred ------------------------------------------------------cCCCc-cccCCHHHHHHHHHHhcCCH
Confidence 00000 01247889999999999999
Q ss_pred CCCCCH---HHHhcCccccCc
Q 007541 344 KDRPTA---EEALADPYFKGL 361 (599)
Q Consensus 344 ~~RpTa---~e~L~HP~f~~~ 361 (599)
.+|||+ .++|+||||+++
T Consensus 243 ~~Rpt~~~~~~~l~~~~~~~~ 263 (265)
T cd05579 243 EKRLGAKSIEEIKNHPFFKGI 263 (265)
T ss_pred hhcCCCccHHHHhcCccccCC
Confidence 999999 999999999865
No 253
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=1.6e-38 Score=322.47 Aligned_cols=256 Identities=21% Similarity=0.358 Sum_probs=201.9
Q ss_pred eEEEEEEeecCceEEEEEEECC---CCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCc-CCCc
Q 007541 25 YKIEEVIGKGSYGVVCSAYDTR---TGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSR-REFK 100 (599)
Q Consensus 25 Y~i~~~LG~G~~g~V~~a~d~~---tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~-~~~~ 100 (599)
|++++.||+|+||+||+|.+.. ++..||||+++...........+.+|+.+|+.++|+||+++++++..... ....
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence 6788999999999999998765 34889999987544444456678899999999999999999998865432 3344
Q ss_pred cEEEEEecCC-cCHHHHHHhC------CCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCcc
Q 007541 101 DIYVVFELME-SDLHQVIKAN------DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLA 173 (599)
Q Consensus 101 ~iylV~E~~~-g~L~~~i~~~------~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA 173 (599)
..++||||+. ++|..++... ..+++..+..++.||+.||.|||+.||+||||||+|||+++++.+||+|||++
T Consensus 81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~ 160 (273)
T cd05035 81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLREDMTVCVADFGLS 160 (273)
T ss_pred ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEECCCCeEEECCccce
Confidence 6899999999 6998888542 36899999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHh-CCCCCCCCChhhHHHHHHHhcCCCCH
Q 007541 174 RVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLLGTPSP 252 (599)
Q Consensus 174 ~~~~~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLlt-G~~pF~g~~~~~~l~~I~~~lG~p~~ 252 (599)
+........ ........+..|+|||.+.. ..++.++||||+||+++||++ |.+||.+.+..+.++.+..
T Consensus 161 ~~~~~~~~~-~~~~~~~~~~~~~~pe~~~~--~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~~~~~~~~------- 230 (273)
T cd05035 161 KKIYSGDYY-RQGRIAKMPVKWIAIESLAD--RVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDYLRH------- 230 (273)
T ss_pred eeccccccc-cccccccCCccccCHhhccc--CCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc-------
Confidence 865432211 01112234567999999866 678999999999999999999 8899987654333222211
Q ss_pred HHHHHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHH
Q 007541 253 EAIARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLAL 332 (599)
Q Consensus 253 e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~ 332 (599)
... .......++.+.
T Consensus 231 --------------------------------------------------------------~~~---~~~~~~~~~~~~ 245 (273)
T cd05035 231 --------------------------------------------------------------GNR---LKQPEDCLDELY 245 (273)
T ss_pred --------------------------------------------------------------CCC---CCCCcCCCHHHH
Confidence 000 011235678899
Q ss_pred HHHHHhcccCCCCCCCHHHHhcC
Q 007541 333 RLLERMLAFEPKDRPTAEEALAD 355 (599)
Q Consensus 333 dLL~~mL~~DP~~RpTa~e~L~H 355 (599)
+||.+||+.||++|||+.|++.+
T Consensus 246 ~li~~~l~~~p~~Rp~~~e~~~~ 268 (273)
T cd05035 246 DLMYSCWRADPKDRPTFTKLREV 268 (273)
T ss_pred HHHHHHcCCChhhCcCHHHHHHH
Confidence 99999999999999999999874
No 254
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=1.7e-38 Score=326.57 Aligned_cols=263 Identities=21% Similarity=0.383 Sum_probs=208.1
Q ss_pred ceEEEEEEeecCceEEEEEEEC---CCCcEEEEEEecCcc--cChhhHHHHHHHHHHHHhc-CCCCccccceeecCCCcC
Q 007541 24 RYKIEEVIGKGSYGVVCSAYDT---RTGEKVAIKKINDIF--EHVSDATRILREIKLLRLL-RHPDIVEIKHILLPPSRR 97 (599)
Q Consensus 24 rY~i~~~LG~G~~g~V~~a~d~---~tg~~vAIK~i~~~~--~~~~~~~~i~rEi~iL~~l-~HpnIv~l~~v~~~~s~~ 97 (599)
.|++.+.||.|+||.||+|.+. .+|+.||+|++.... ......+++.+|+.+|+.+ +|+||+.+++++..
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~---- 76 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQT---- 76 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeec----
Confidence 4899999999999999999875 478999999986422 1223446678899999999 49999999988843
Q ss_pred CCccEEEEEecCC-cCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccc
Q 007541 98 EFKDIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVA 176 (599)
Q Consensus 98 ~~~~iylV~E~~~-g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~ 176 (599)
...+|+||||+. ++|.+++.....+++..+..++.||+.||.|||+.|++||||||+|||++.++.+||+|||+++..
T Consensus 77 -~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~ 155 (290)
T cd05613 77 -DTKLHLILDYINGGELFTHLSQRERFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEF 155 (290)
T ss_pred -CCeEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEECCCCCEEEeeCccceec
Confidence 347899999999 599999988888999999999999999999999999999999999999999999999999999765
Q ss_pred cCCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHH
Q 007541 177 FNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIA 256 (599)
Q Consensus 177 ~~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~ 256 (599)
...... ......++..|+|||.+......++.++||||+||++++|++|..||...+.......+.+
T Consensus 156 ~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~----------- 222 (290)
T cd05613 156 HEDEVE--RAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISR----------- 222 (290)
T ss_pred cccccc--ccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHH-----------
Confidence 322111 1234568899999999865324578899999999999999999999965432211111110
Q ss_pred HHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHH
Q 007541 257 RVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLE 336 (599)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~ 336 (599)
.+.... .+ ....+++.+.+||+
T Consensus 223 ------------------------------------------------------~~~~~~-~~---~~~~~~~~~~~ll~ 244 (290)
T cd05613 223 ------------------------------------------------------RILKSE-PP---YPQEMSALAKDIIQ 244 (290)
T ss_pred ------------------------------------------------------HhhccC-CC---CCccCCHHHHHHHH
Confidence 000000 00 11346788999999
Q ss_pred HhcccCCCCCC-----CHHHHhcCccccCcc
Q 007541 337 RMLAFEPKDRP-----TAEEALADPYFKGLA 362 (599)
Q Consensus 337 ~mL~~DP~~Rp-----Ta~e~L~HP~f~~~~ 362 (599)
+||+.||.+|+ +++++++||||+.+.
T Consensus 245 ~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~ 275 (290)
T cd05613 245 RLLMKDPKKRLGCGPSDADEIKKHPFFQKIN 275 (290)
T ss_pred HHhcCCHHHhcCCCCCCHHHHHcCcccccCC
Confidence 99999999997 899999999998763
No 255
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=2.4e-38 Score=317.73 Aligned_cols=251 Identities=28% Similarity=0.450 Sum_probs=209.2
Q ss_pred ceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEE
Q 007541 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIY 103 (599)
Q Consensus 24 rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~iy 103 (599)
+|++.+.||.|+||.||++.+..+++.||+|++............+.+|+.+++.++|+||+++.+++... ...|
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-----~~~~ 75 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDG-----NKLC 75 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccC-----CEEE
Confidence 58999999999999999999999999999999976444445566778999999999999999999998543 5799
Q ss_pred EEEecCC-cCHHHHHHh----CCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccC
Q 007541 104 VVFELME-SDLHQVIKA----NDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFN 178 (599)
Q Consensus 104 lV~E~~~-g~L~~~i~~----~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~ 178 (599)
+||||++ ++|.+++.. ...+++..+..++.||+.||.|||+.|++|+||+|+||+++.++.+||+|||++.....
T Consensus 76 ~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~ 155 (256)
T cd08530 76 IVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLVANDLVKIGDLGISKVLKK 155 (256)
T ss_pred EEehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEecCCcEEEeeccchhhhcc
Confidence 9999998 589998866 35689999999999999999999999999999999999999999999999999987644
Q ss_pred CCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHH
Q 007541 179 DTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARV 258 (599)
Q Consensus 179 ~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~ 258 (599)
.. .....++..|+|||.+.+ ..++.++|+||+||++++|++|+.||.+.+.......+..
T Consensus 156 ~~-----~~~~~~~~~~~~Pe~~~~--~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~------------- 215 (256)
T cd08530 156 NM-----AKTQIGTPHYMAPEVWKG--RPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKVQR------------- 215 (256)
T ss_pred CC-----cccccCCccccCHHHHCC--CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc-------------
Confidence 31 123467889999999876 6788999999999999999999999987654332221110
Q ss_pred hhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHh
Q 007541 259 CLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERM 338 (599)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~m 338 (599)
. .+.......+..+.++|.+|
T Consensus 216 --------------------------------------------------------~---~~~~~~~~~~~~~~~li~~~ 236 (256)
T cd08530 216 --------------------------------------------------------G---KYPPIPPIYSQDLQNFIRSM 236 (256)
T ss_pred --------------------------------------------------------C---CCCCCchhhCHHHHHHHHHH
Confidence 0 00111124567899999999
Q ss_pred cccCCCCCCCHHHHhcCccc
Q 007541 339 LAFEPKDRPTAEEALADPYF 358 (599)
Q Consensus 339 L~~DP~~RpTa~e~L~HP~f 358 (599)
|..||.+|||+.|+|+||++
T Consensus 237 l~~~p~~Rp~~~~~l~~p~~ 256 (256)
T cd08530 237 LQVKPKLRPNCDKILASPAV 256 (256)
T ss_pred cCCCcccCCCHHHHhcCCCC
Confidence 99999999999999999974
No 256
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=6.6e-39 Score=343.48 Aligned_cols=205 Identities=27% Similarity=0.441 Sum_probs=168.5
Q ss_pred CCceEEEEEEeecCceEEEEEEECCCC-----cEEEEEEecCcccChhhHHHHHHHHHHHHhc-CCCCccccceeecCCC
Q 007541 22 GSRYKIEEVIGKGSYGVVCSAYDTRTG-----EKVAIKKINDIFEHVSDATRILREIKLLRLL-RHPDIVEIKHILLPPS 95 (599)
Q Consensus 22 ~~rY~i~~~LG~G~~g~V~~a~d~~tg-----~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l-~HpnIv~l~~v~~~~s 95 (599)
.++|++++.||+|+||+||+|++..+| ..||||+++... .......+.+|+.+|+.+ +|+||+++++.+..
T Consensus 37 ~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~-- 113 (374)
T cd05106 37 RDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASA-HTDEREALMSELKILSHLGQHKNIVNLLGACTH-- 113 (374)
T ss_pred HHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCC-CHHHHHHHHHHHHHHHhhccCCceeeEeeEecC--
Confidence 468999999999999999999975544 579999997532 223456788999999999 79999999999843
Q ss_pred cCCCccEEEEEecCC-cCHHHHHHhC------------------------------------------------------
Q 007541 96 RREFKDIYVVFELME-SDLHQVIKAN------------------------------------------------------ 120 (599)
Q Consensus 96 ~~~~~~iylV~E~~~-g~L~~~i~~~------------------------------------------------------ 120 (599)
...+|+||||+. |+|.+++...
T Consensus 114 ---~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (374)
T cd05106 114 ---GGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSS 190 (374)
T ss_pred ---CCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccc
Confidence 347999999999 6999988542
Q ss_pred ----------------CCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCCCCCcc
Q 007541 121 ----------------DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAI 184 (599)
Q Consensus 121 ----------------~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~~~~~ 184 (599)
..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++........ .
T Consensus 191 ~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~-~ 269 (374)
T cd05106 191 SSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNY-V 269 (374)
T ss_pred ccccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEeCCCeEEEeeceeeeeccCCcce-e
Confidence 13678899999999999999999999999999999999999999999999999765332211 1
Q ss_pred cccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHh-CCCCCCCCC
Q 007541 185 FWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKN 235 (599)
Q Consensus 185 ~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLlt-G~~pF~g~~ 235 (599)
......++..|+|||++.. ..++.++||||+||++|+|++ |+.||....
T Consensus 270 ~~~~~~~~~~y~aPE~~~~--~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~ 319 (374)
T cd05106 270 VKGNARLPVKWMAPESIFD--CVYTVQSDVWSYGILLWEIFSLGKSPYPGIL 319 (374)
T ss_pred eccCCCCccceeCHHHhcC--CCCCccccHHHHHHHHHHHHhCCCCCCcccc
Confidence 1122335567999999876 679999999999999999997 999997654
No 257
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=1.8e-38 Score=324.23 Aligned_cols=254 Identities=20% Similarity=0.367 Sum_probs=199.7
Q ss_pred CCCceEEEEEEeecCceEEEEEEECC-----CCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCC
Q 007541 21 EGSRYKIEEVIGKGSYGVVCSAYDTR-----TGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPS 95 (599)
Q Consensus 21 ~~~rY~i~~~LG~G~~g~V~~a~d~~-----tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s 95 (599)
..++|++.+.||+|+||+||+|.++. ++..||||++... ........+.+|+.+++.++|+||+++++++.
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~-~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~--- 79 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEA-ASMRERIEFLNEASVMKEFNCHHVVRLLGVVS--- 79 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEecccc-CCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEc---
Confidence 45789999999999999999998753 4578999998642 22234556889999999999999999999984
Q ss_pred cCCCccEEEEEecCC-cCHHHHHHhCC----------CCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCc
Q 007541 96 RREFKDIYVVFELME-SDLHQVIKAND----------DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCK 164 (599)
Q Consensus 96 ~~~~~~iylV~E~~~-g~L~~~i~~~~----------~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~ 164 (599)
+...+|+||||+. ++|.+++.... .++...+..++.||+.||.|||+.|++||||||+|||++.++.
T Consensus 80 --~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~~~~~ 157 (277)
T cd05062 80 --QGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFT 157 (277)
T ss_pred --CCCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEEcCCCC
Confidence 3347899999998 69999987532 3567888999999999999999999999999999999999999
Q ss_pred eeeeccCccccccCCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHh-CCCCCCCCChhhHHHHH
Q 007541 165 LKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIM 243 (599)
Q Consensus 165 lKL~DFGlA~~~~~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLlt-G~~pF~g~~~~~~l~~I 243 (599)
+||+|||+++......... ......++..|+|||++.+ ..++.++|||||||++|+|++ |..||.+.+....+..+
T Consensus 158 ~~l~dfg~~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~~~~~~ 234 (277)
T cd05062 158 VKIGDFGMTRDIYETDYYR-KGGKGLLPVRWMSPESLKD--GVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRFV 234 (277)
T ss_pred EEECCCCCccccCCcceee-cCCCCccCHhhcChhHhhc--CCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Confidence 9999999997643322111 1112345778999999876 578999999999999999998 78899876544333222
Q ss_pred HHhcCCCCHHHHHHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCC
Q 007541 244 TDLLGTPSPEAIARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQK 323 (599)
Q Consensus 244 ~~~lG~p~~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (599)
... . +...
T Consensus 235 ~~~---------------------------------------------------------------------~---~~~~ 242 (277)
T cd05062 235 MEG---------------------------------------------------------------------G---LLDK 242 (277)
T ss_pred HcC---------------------------------------------------------------------C---cCCC
Confidence 110 0 0011
Q ss_pred CCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 007541 324 FPNANPLALRLLERMLAFEPKDRPTAEEALAD 355 (599)
Q Consensus 324 ~~~~s~~a~dLL~~mL~~DP~~RpTa~e~L~H 355 (599)
....++.+.+||.+||+.||.+|||+.|++++
T Consensus 243 ~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 274 (277)
T cd05062 243 PDNCPDMLFELMRMCWQYNPKMRPSFLEIISS 274 (277)
T ss_pred CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 12456789999999999999999999999874
No 258
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=2.5e-38 Score=325.54 Aligned_cols=259 Identities=22% Similarity=0.369 Sum_probs=202.9
Q ss_pred CCceEEEEEEeecCceEEEEEEECC-----CCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCc
Q 007541 22 GSRYKIEEVIGKGSYGVVCSAYDTR-----TGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSR 96 (599)
Q Consensus 22 ~~rY~i~~~LG~G~~g~V~~a~d~~-----tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~ 96 (599)
.++|++.+.||+|+||.||+|.++. .+..||+|.+.... .......+.+|+.+++.++|+||+++++++...
T Consensus 5 ~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-- 81 (288)
T cd05061 5 REKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESA-SLRERIEFLNEASVMKGFTCHHVVRLLGVVSKG-- 81 (288)
T ss_pred HHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcC-CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCC--
Confidence 5799999999999999999997653 35589999886432 223345678999999999999999999998433
Q ss_pred CCCccEEEEEecCC-cCHHHHHHhC----------CCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCce
Q 007541 97 REFKDIYVVFELME-SDLHQVIKAN----------DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKL 165 (599)
Q Consensus 97 ~~~~~iylV~E~~~-g~L~~~i~~~----------~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~l 165 (599)
...|+||||+. ++|.+++... ..++...+..++.||+.||.|||++||+||||||+|||++.++.+
T Consensus 82 ---~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili~~~~~~ 158 (288)
T cd05061 82 ---QPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTV 158 (288)
T ss_pred ---CCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEEcCCCcE
Confidence 46899999998 6999999753 234567889999999999999999999999999999999999999
Q ss_pred eeeccCccccccCCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHh-CCCCCCCCChhhHHHHHH
Q 007541 166 KICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMT 244 (599)
Q Consensus 166 KL~DFGlA~~~~~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLlt-G~~pF~g~~~~~~l~~I~ 244 (599)
||+|||+++......... ......++..|+|||.+.+ ..++.++||||+||++++|++ |..||.+.+..+.+..+.
T Consensus 159 ~L~Dfg~~~~~~~~~~~~-~~~~~~~~~~y~~pE~~~~--~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~~~~~~~ 235 (288)
T cd05061 159 KIGDFGMTRDIYETDYYR-KGGKGLLPVRWMAPESLKD--GVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVM 235 (288)
T ss_pred EECcCCcccccccccccc-ccCCCcccccccCHHHhcc--CCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Confidence 999999998653322111 1122245677999999876 578999999999999999998 788997765443322221
Q ss_pred HhcCCCCHHHHHHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCC
Q 007541 245 DLLGTPSPEAIARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKF 324 (599)
Q Consensus 245 ~~lG~p~~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (599)
+. . .....
T Consensus 236 ~~---------------------------------------------------------------------~---~~~~~ 243 (288)
T cd05061 236 DG---------------------------------------------------------------------G---YLDQP 243 (288)
T ss_pred cC---------------------------------------------------------------------C---CCCCC
Confidence 10 0 00011
Q ss_pred CCCCHHHHHHHHHhcccCCCCCCCHHHHhc------CccccCc
Q 007541 325 PNANPLALRLLERMLAFEPKDRPTAEEALA------DPYFKGL 361 (599)
Q Consensus 325 ~~~s~~a~dLL~~mL~~DP~~RpTa~e~L~------HP~f~~~ 361 (599)
...++.+.+||.+||+.||++|||+.++++ ||||.++
T Consensus 244 ~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~~~~~~ 286 (288)
T cd05061 244 DNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFPEV 286 (288)
T ss_pred CCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhcCCCCCCC
Confidence 234678999999999999999999999987 9999875
No 259
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=1.3e-38 Score=324.88 Aligned_cols=252 Identities=23% Similarity=0.348 Sum_probs=202.3
Q ss_pred CCceEEEEEEeecCceEEEEEEECC-----CCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCc
Q 007541 22 GSRYKIEEVIGKGSYGVVCSAYDTR-----TGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSR 96 (599)
Q Consensus 22 ~~rY~i~~~LG~G~~g~V~~a~d~~-----tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~ 96 (599)
.++|.+.+.||+|+||.||+|.+.. +++.||||+++.... ......+.+|+.+|+.++|+||+++++++...
T Consensus 4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-- 80 (280)
T cd05049 4 RDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETAS-NDARKDFEREAELLTNFQHENIVKFYGVCTEG-- 80 (280)
T ss_pred hHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCC-HHHHHHHHHHHHHHHhcCCCCchheeeEEecC--
Confidence 4679999999999999999998754 468899999875322 22346788999999999999999999998543
Q ss_pred CCCccEEEEEecCC-cCHHHHHHhCC--------------CCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCC
Q 007541 97 REFKDIYVVFELME-SDLHQVIKAND--------------DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANA 161 (599)
Q Consensus 97 ~~~~~iylV~E~~~-g~L~~~i~~~~--------------~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~ 161 (599)
..+|+||||+. ++|.+++..++ .+++..+..++.||+.||.|||++||+||||||+|||++.
T Consensus 81 ---~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili~~ 157 (280)
T cd05049 81 ---DPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLVGY 157 (280)
T ss_pred ---CCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeeccccccceEEEcC
Confidence 57999999998 69999997643 4788999999999999999999999999999999999999
Q ss_pred CCceeeeccCccccccCCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHh-CCCCCCCCChhhHH
Q 007541 162 DCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQL 240 (599)
Q Consensus 162 ~~~lKL~DFGlA~~~~~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLlt-G~~pF~g~~~~~~l 240 (599)
++.+||+|||+++........ .......++..|+|||++.+ ..++.++|||||||++++|++ |..||.+.+....+
T Consensus 158 ~~~~kl~d~g~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~~~ 234 (280)
T cd05049 158 DLVVKIGDFGMSRDVYTTDYY-RVGGHTMLPIRWMPPESIMY--RKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEEVI 234 (280)
T ss_pred CCeEEECCcccceecccCcce-ecCCCCcccceecChhhhcc--CCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHH
Confidence 999999999999754322111 11223456788999999876 678999999999999999998 99999776654433
Q ss_pred HHHHHhcCCCCHHHHHHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCC
Q 007541 241 DIMTDLLGTPSPEAIARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPF 320 (599)
Q Consensus 241 ~~I~~~lG~p~~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (599)
..+... . .
T Consensus 235 ~~~~~~---------------------------------------------------------------------~---~ 242 (280)
T cd05049 235 ECITQG---------------------------------------------------------------------R---L 242 (280)
T ss_pred HHHHcC---------------------------------------------------------------------C---c
Confidence 322210 0 0
Q ss_pred CCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 007541 321 SQKFPNANPLALRLLERMLAFEPKDRPTAEEALA 354 (599)
Q Consensus 321 ~~~~~~~s~~a~dLL~~mL~~DP~~RpTa~e~L~ 354 (599)
.......+..+.+||.+||+.||.+|||+.|+++
T Consensus 243 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~ 276 (280)
T cd05049 243 LQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHE 276 (280)
T ss_pred CCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 0111246778999999999999999999999986
No 260
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-40 Score=351.00 Aligned_cols=267 Identities=24% Similarity=0.407 Sum_probs=217.4
Q ss_pred ccccCCCCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCC
Q 007541 16 FTEYGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPS 95 (599)
Q Consensus 16 ~~~~~~~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s 95 (599)
+..+...+.|.|+..||.|+||.||+|..+.++-..|.|+|.- ......+.++-||.||..+.||+||+|++.|+..
T Consensus 25 ~rdlnP~d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIet--kseEELEDylVEIeILa~CdHP~ivkLl~ayy~e- 101 (1187)
T KOG0579|consen 25 YRDLNPRDHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIET--KSEEELEDYLVEIEILAECDHPVIVKLLSAYYFE- 101 (1187)
T ss_pred hccCCHHHHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcc--cchhHHhhhhhhhhhhhcCCChHHHHHHHHHhcc-
Confidence 3344556778899999999999999999999999999998853 2345667788999999999999999999999644
Q ss_pred cCCCccEEEEEecCCc-CHHHHHHh-CCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCcc
Q 007541 96 RREFKDIYVVFELMES-DLHQVIKA-NDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLA 173 (599)
Q Consensus 96 ~~~~~~iylV~E~~~g-~L~~~i~~-~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA 173 (599)
+.++|+.|+|+| -...++.. ...|++.+++.+++|++.||.|||+++|||||||.-|||++-+|.++|+|||.+
T Consensus 102 ----nkLwiliEFC~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~TldGdirLADFGVS 177 (1187)
T KOG0579|consen 102 ----NKLWILIEFCGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLTLDGDIRLADFGVS 177 (1187)
T ss_pred ----CceEEEEeecCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEEecCcEeeeccccc
Confidence 479999999996 45555544 457999999999999999999999999999999999999999999999999998
Q ss_pred ccccCCCCCcccccccccCccccCccccccc---cCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCC
Q 007541 174 RVAFNDTPTAIFWTDYVATRWYRAPELCGSF---FSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTP 250 (599)
Q Consensus 174 ~~~~~~~~~~~~~t~~~gt~~Y~APE~l~~~---~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p 250 (599)
..... +...-..++||++|||||+.... -..|++++||||||++|.||..+.||-..-+....+-+|.+. .
T Consensus 178 AKn~~---t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVllKiaKS---e 251 (1187)
T KOG0579|consen 178 AKNKS---TRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKS---E 251 (1187)
T ss_pred ccchh---HHhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHHHHHhhc---C
Confidence 64321 11122467999999999986432 146999999999999999999999998877766655555431 1
Q ss_pred CHHHHHHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHH
Q 007541 251 SPEAIARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPL 330 (599)
Q Consensus 251 ~~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 330 (599)
++ .+. ....++..
T Consensus 252 PP------------------------------------------------------------------TLl-qPS~Ws~~ 264 (1187)
T KOG0579|consen 252 PP------------------------------------------------------------------TLL-QPSHWSRS 264 (1187)
T ss_pred CC------------------------------------------------------------------ccc-CcchhhhH
Confidence 11 111 11346677
Q ss_pred HHHHHHHhcccCCCCCCCHHHHhcCccccCcc
Q 007541 331 ALRLLERMLAFEPKDRPTAEEALADPYFKGLA 362 (599)
Q Consensus 331 a~dLL~~mL~~DP~~RpTa~e~L~HP~f~~~~ 362 (599)
+.|||++||..||..||++.++|+||||++..
T Consensus 265 F~DfLk~cL~Knp~~Rp~aaqll~Hpfv~~~~ 296 (1187)
T KOG0579|consen 265 FSDFLKRCLVKNPRNRPPAAQLLKHPFVQNAP 296 (1187)
T ss_pred HHHHHHHHHhcCCccCCCHHHHhhCcccccCC
Confidence 99999999999999999999999999999753
No 261
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=100.00 E-value=1.8e-38 Score=331.19 Aligned_cols=265 Identities=26% Similarity=0.393 Sum_probs=213.4
Q ss_pred ccccccCCCCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCccc-ChhhHHHHHHHHHHHHhcCCCCccccceeec
Q 007541 14 DFFTEYGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFE-HVSDATRILREIKLLRLLRHPDIVEIKHILL 92 (599)
Q Consensus 14 ~~~~~~~~~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~-~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~ 92 (599)
.++......+.|...+.||+|+||+||+|.+..+|+.||||++..... .......+.+|+.+++.++|+|++++++++.
T Consensus 12 ~~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~ 91 (313)
T cd06633 12 DLFYKDDPEEIFVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYL 91 (313)
T ss_pred HHhccCCHHHHhhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEE
Confidence 344445556778889999999999999999999999999999864322 2234457889999999999999999999985
Q ss_pred CCCcCCCccEEEEEecCCcCHHHHHHh-CCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccC
Q 007541 93 PPSRREFKDIYVVFELMESDLHQVIKA-NDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFG 171 (599)
Q Consensus 93 ~~s~~~~~~iylV~E~~~g~L~~~i~~-~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFG 171 (599)
. ....|+||||+.++|.+++.. ...+++..+..++.||+.+|.|||++||+|+||||+||+++.++.+||+|||
T Consensus 92 ~-----~~~~~lv~e~~~~~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili~~~~~~kL~dfg 166 (313)
T cd06633 92 K-----EHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFG 166 (313)
T ss_pred e-----CCEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEECCCCCEEEeecC
Confidence 4 347899999999999888865 3478999999999999999999999999999999999999999999999999
Q ss_pred ccccccCCCCCcccccccccCccccCccccccc-cCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCC
Q 007541 172 LARVAFNDTPTAIFWTDYVATRWYRAPELCGSF-FSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTP 250 (599)
Q Consensus 172 lA~~~~~~~~~~~~~t~~~gt~~Y~APE~l~~~-~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p 250 (599)
++..... .....++..|+|||++... ...++.++||||+||++++|++|.+||.+.+....+..+....
T Consensus 167 ~~~~~~~-------~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~--- 236 (313)
T cd06633 167 SASKSSP-------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQND--- 236 (313)
T ss_pred CCcccCC-------CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcC---
Confidence 9864211 1245688899999987421 1458889999999999999999999997766444333221100
Q ss_pred CHHHHHHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHH
Q 007541 251 SPEAIARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPL 330 (599)
Q Consensus 251 ~~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 330 (599)
.+ .......+..
T Consensus 237 -----------------------------------------------------------------~~---~~~~~~~~~~ 248 (313)
T cd06633 237 -----------------------------------------------------------------SP---TLQSNEWTDS 248 (313)
T ss_pred -----------------------------------------------------------------CC---CCCccccCHH
Confidence 00 0011345677
Q ss_pred HHHHHHHhcccCCCCCCCHHHHhcCccccCc
Q 007541 331 ALRLLERMLAFEPKDRPTAEEALADPYFKGL 361 (599)
Q Consensus 331 a~dLL~~mL~~DP~~RpTa~e~L~HP~f~~~ 361 (599)
+.+||.+||+.||.+|||+.++|.||||...
T Consensus 249 l~~li~~~l~~~P~~Rp~~~~~l~~~~~~~~ 279 (313)
T cd06633 249 FRGFVDYCLQKIPQERPASAELLRHDFVRRD 279 (313)
T ss_pred HHHHHHHHccCChhhCcCHHHHhcCcccCCC
Confidence 8999999999999999999999999999853
No 262
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=1.8e-38 Score=323.64 Aligned_cols=257 Identities=31% Similarity=0.500 Sum_probs=207.6
Q ss_pred ceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcC---CCCccccceeecCCCcCCCc
Q 007541 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLR---HPDIVEIKHILLPPSRREFK 100 (599)
Q Consensus 24 rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~---HpnIv~l~~v~~~~s~~~~~ 100 (599)
.|++++.||+|+||.||+|.+..+++.||||.+..... ......+.+|+.+++.++ |||++++++++.. ..
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~-----~~ 75 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTP-DDDVSDIQREVALLSQLRQSQPPNITKYYGSYLK-----GP 75 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCC-chhHHHHHHHHHHHHHhccCCCCCeeeEeeeeee-----CC
Confidence 58889999999999999999999999999999864322 234557789999999997 9999999998843 34
Q ss_pred cEEEEEecCC-cCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCC
Q 007541 101 DIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFND 179 (599)
Q Consensus 101 ~iylV~E~~~-g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~ 179 (599)
..|+||||+. ++|.+++... .+++..+..++.||+.||.|||+.||+|+||+|+||+++.++.++|+|||++......
T Consensus 76 ~~~lv~e~~~~~~L~~~~~~~-~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~ 154 (277)
T cd06917 76 RLWIIMEYAEGGSVRTLMKAG-PIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQN 154 (277)
T ss_pred EEEEEEecCCCCcHHHHHHcc-CCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEEcCCCCEEEccCCceeecCCC
Confidence 7899999998 5899888664 7999999999999999999999999999999999999999999999999999876433
Q ss_pred CCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHh
Q 007541 180 TPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVC 259 (599)
Q Consensus 180 ~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~ 259 (599)
.. ......++..|+|||.+... ..++.++|+||+||++++|++|..||.+.+.......+.
T Consensus 155 ~~---~~~~~~~~~~y~aPE~~~~~-~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~--------------- 215 (277)
T cd06917 155 SS---KRSTFVGTPYWMAPEVITEG-KYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMMLIP--------------- 215 (277)
T ss_pred cc---ccccccCCcceeCHHHhccC-CccccchhHHHHHHHHHHHHhCCCCCCCCChhhhhhccc---------------
Confidence 21 12345788899999987542 457889999999999999999999997654322111100
Q ss_pred hhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHhc
Q 007541 260 LLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERML 339 (599)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL 339 (599)
...+..+. ....+..+.+||.+||
T Consensus 216 ------------------------------------------------------~~~~~~~~--~~~~~~~~~~~i~~~l 239 (277)
T cd06917 216 ------------------------------------------------------KSKPPRLE--DNGYSKLLREFVAACL 239 (277)
T ss_pred ------------------------------------------------------cCCCCCCC--cccCCHHHHHHHHHHc
Confidence 00000000 0125678999999999
Q ss_pred ccCCCCCCCHHHHhcCccccCcc
Q 007541 340 AFEPKDRPTAEEALADPYFKGLA 362 (599)
Q Consensus 340 ~~DP~~RpTa~e~L~HP~f~~~~ 362 (599)
+.||.+|||+.|++.||||+...
T Consensus 240 ~~~p~~R~~~~~il~~~~~~~~~ 262 (277)
T cd06917 240 DEEPKERLSAEELLKSKWIKAHS 262 (277)
T ss_pred CCCcccCcCHHHHhhChHhhccc
Confidence 99999999999999999998654
No 263
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=2.4e-38 Score=321.58 Aligned_cols=256 Identities=22% Similarity=0.385 Sum_probs=201.1
Q ss_pred eEEEEEEeecCceEEEEEEECCCCc--EEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCc-CCCcc
Q 007541 25 YKIEEVIGKGSYGVVCSAYDTRTGE--KVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSR-REFKD 101 (599)
Q Consensus 25 Y~i~~~LG~G~~g~V~~a~d~~tg~--~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~-~~~~~ 101 (599)
|.+.++||+|+||+||+|.+..++. .||+|.++...........+.+|+.+|+.++|+||+++++++..... .....
T Consensus 1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 80 (272)
T cd05075 1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPS 80 (272)
T ss_pred CccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCC
Confidence 3567899999999999999887775 69999987654455566788899999999999999999998754321 22346
Q ss_pred EEEEEecCC-cCHHHHHHhC------CCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccc
Q 007541 102 IYVVFELME-SDLHQVIKAN------DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLAR 174 (599)
Q Consensus 102 iylV~E~~~-g~L~~~i~~~------~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~ 174 (599)
.++||||+. ++|.+++... ..+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++
T Consensus 81 ~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~ 160 (272)
T cd05075 81 PVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLNENMNVCVADFGLSK 160 (272)
T ss_pred cEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEEcCCCCEEECCCCccc
Confidence 899999998 6999887431 347899999999999999999999999999999999999999999999999998
Q ss_pred cccCCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHh-CCCCCCCCChhhHHHHHHHhcCCCCHH
Q 007541 175 VAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLLGTPSPE 253 (599)
Q Consensus 175 ~~~~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLlt-G~~pF~g~~~~~~l~~I~~~lG~p~~e 253 (599)
......... ......++..|+|||.+.. ..++.++||||+||++++|++ |+.||.+.........+.+
T Consensus 161 ~~~~~~~~~-~~~~~~~~~~~~~pe~~~~--~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~-------- 229 (272)
T cd05075 161 KIYNGDYYR-QGRIAKMPVKWIAIESLAD--RVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYLRQ-------- 229 (272)
T ss_pred ccCccccee-cCCcccCCcccCCHHHccC--CCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHc--------
Confidence 653322110 0122245678999999876 678999999999999999999 8999987554332222110
Q ss_pred HHHHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHH
Q 007541 254 AIARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALR 333 (599)
Q Consensus 254 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~d 333 (599)
.... ...+..+..+.+
T Consensus 230 -------------------------------------------------------------~~~~---~~~~~~~~~~~~ 245 (272)
T cd05075 230 -------------------------------------------------------------GNRL---KQPPDCLDGLYS 245 (272)
T ss_pred -------------------------------------------------------------CCCC---CCCCCCCHHHHH
Confidence 0000 112346678999
Q ss_pred HHHHhcccCCCCCCCHHHHhcC
Q 007541 334 LLERMLAFEPKDRPTAEEALAD 355 (599)
Q Consensus 334 LL~~mL~~DP~~RpTa~e~L~H 355 (599)
||.+||+.||.+|||+.+++++
T Consensus 246 li~~~l~~~p~~Rps~~~l~~~ 267 (272)
T cd05075 246 LMSSCWLLNPKDRPSFETLRCE 267 (272)
T ss_pred HHHHHcCCCcccCcCHHHHHHH
Confidence 9999999999999999999864
No 264
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=2.5e-38 Score=319.60 Aligned_cols=245 Identities=23% Similarity=0.341 Sum_probs=196.8
Q ss_pred EEeecCceEEEEEEE--CCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEEEEEe
Q 007541 30 VIGKGSYGVVCSAYD--TRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVVFE 107 (599)
Q Consensus 30 ~LG~G~~g~V~~a~d--~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~iylV~E 107 (599)
.||+|+||.||+|.+ ..++..||+|+++...........+.+|+.+|+.+.|+||+++++++.. ...++|||
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~------~~~~lv~e 75 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICEA------ESWMLVME 75 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEcC------CCcEEEEe
Confidence 589999999999964 5678999999987554444456678899999999999999999998732 35799999
Q ss_pred cCC-cCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCCCCCcccc
Q 007541 108 LME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFW 186 (599)
Q Consensus 108 ~~~-g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~~~~~~~ 186 (599)
|+. ++|.+++.....+++..+..++.||+.||+|||++||+||||||.|||++.++.+||+|||+++............
T Consensus 76 ~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 155 (257)
T cd05116 76 LAELGPLNKFLQKNKHVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAK 155 (257)
T ss_pred cCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEcCCCeEEECCCccccccCCCCCeeeec
Confidence 999 6899999887789999999999999999999999999999999999999999999999999998654322211111
Q ss_pred cccccCccccCccccccccCCCCcchhhHhHHHHHHHHHh-CCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHhhhhhhh
Q 007541 187 TDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVCLLLNII 265 (599)
Q Consensus 187 t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLlt-G~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~~~~~~~ 265 (599)
....++..|+|||.+.. ..++.++|||||||++|||++ |..||.+.+..+....+...
T Consensus 156 ~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~i~~~------------------- 214 (257)
T cd05116 156 THGKWPVKWYAPECMNY--YKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIESG------------------- 214 (257)
T ss_pred CCCCCCccccCHhHhcc--CCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCC-------------------
Confidence 22234578999998865 578899999999999999998 99999876544433322210
Q ss_pred hcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCC
Q 007541 266 WCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKD 345 (599)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL~~DP~~ 345 (599)
... ......++.+.+||.+||+.||.+
T Consensus 215 --------------------------------------------------~~~---~~~~~~~~~l~~li~~~~~~~p~~ 241 (257)
T cd05116 215 --------------------------------------------------ERM---ECPQRCPPEMYDLMKLCWTYGVDE 241 (257)
T ss_pred --------------------------------------------------CCC---CCCCCCCHHHHHHHHHHhccCchh
Confidence 000 112346788999999999999999
Q ss_pred CCCHHHHhc
Q 007541 346 RPTAEEALA 354 (599)
Q Consensus 346 RpTa~e~L~ 354 (599)
|||++++..
T Consensus 242 Rp~~~~i~~ 250 (257)
T cd05116 242 RPGFAVVEL 250 (257)
T ss_pred CcCHHHHHH
Confidence 999999865
No 265
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=5.3e-39 Score=356.74 Aligned_cols=257 Identities=26% Similarity=0.440 Sum_probs=204.8
Q ss_pred CCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcC-CCCccccce-eecCCCcCC-
Q 007541 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLR-HPDIVEIKH-ILLPPSRRE- 98 (599)
Q Consensus 22 ~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~-HpnIv~l~~-v~~~~s~~~- 98 (599)
.-+++|.++|.+|||+.||+|.+...|..||+|++-.. +......+.+||.+|+.|+ |+|||.+++ ........+
T Consensus 36 ~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~--de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~ 113 (738)
T KOG1989|consen 36 SHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVN--DEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNG 113 (738)
T ss_pred CEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecC--CHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCc
Confidence 46789999999999999999999999999999998643 5566778899999999998 999999999 333332233
Q ss_pred CccEEEEEecCC-cCHHHHHHhC--CCCCHHHHHHHHHHHHhhhhhcccCc--eEeecCCCCcEEeCCCCceeeeccCcc
Q 007541 99 FKDIYVVFELME-SDLHQVIKAN--DDLTPEHYQFFLYQLLRGLKYIHTAN--VFHRDLKPKNILANADCKLKICDFGLA 173 (599)
Q Consensus 99 ~~~iylV~E~~~-g~L~~~i~~~--~~lse~~i~~i~~QLl~aL~yLHs~g--IvHrDLKP~NILv~~~~~lKL~DFGlA 173 (599)
.-.+.|+||||. |.|.+++... .+|+|.++..||+|+++||.+||... |||||||-|||||+.+|..||||||.|
T Consensus 114 ~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~g~~KLCDFGSa 193 (738)
T KOG1989|consen 114 VWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSADGNYKLCDFGSA 193 (738)
T ss_pred eeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCCCCEEeCccccc
Confidence 357889999999 6999999743 46999999999999999999999998 999999999999999999999999999
Q ss_pred ccccCCCCC-cc--c---ccccccCccccCccccccc-cCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHh
Q 007541 174 RVAFNDTPT-AI--F---WTDYVATRWYRAPELCGSF-FSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDL 246 (599)
Q Consensus 174 ~~~~~~~~~-~~--~---~t~~~gt~~Y~APE~l~~~-~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~ 246 (599)
.-..-.... .. . ......|+.|||||.|.-. ....+.++|||+|||+||-||....||.+......+
T Consensus 194 tt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~laIl------ 267 (738)
T KOG1989|consen 194 TTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKLAIL------ 267 (738)
T ss_pred ccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcceeEE------
Confidence 643221111 00 0 0123578999999987321 146789999999999999999999999765321100
Q ss_pred cCCCCHHHHHHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCC
Q 007541 247 LGTPSPEAIARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPN 326 (599)
Q Consensus 247 lG~p~~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (599)
+.. ..| ..+++
T Consensus 268 -------------------------------------------------------ng~-------------Y~~-P~~p~ 278 (738)
T KOG1989|consen 268 -------------------------------------------------------NGN-------------YSF-PPFPN 278 (738)
T ss_pred -------------------------------------------------------ecc-------------ccC-CCCcc
Confidence 000 001 12367
Q ss_pred CCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 007541 327 ANPLALRLLERMLAFEPKDRPTAEEALAD 355 (599)
Q Consensus 327 ~s~~a~dLL~~mL~~DP~~RpTa~e~L~H 355 (599)
.+..+.+||+.||+.||.+||++-|++.+
T Consensus 279 ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~ 307 (738)
T KOG1989|consen 279 YSDRLKDLIRTMLQPNPDERPNIYQVLEE 307 (738)
T ss_pred HHHHHHHHHHHHhccCcccCCCHHHHHHH
Confidence 88899999999999999999999999875
No 266
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=1.3e-38 Score=324.70 Aligned_cols=247 Identities=22% Similarity=0.350 Sum_probs=196.2
Q ss_pred CceEEEEEE--eecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhc-CCCCccccceeecCCCcCCC
Q 007541 23 SRYKIEEVI--GKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLL-RHPDIVEIKHILLPPSRREF 99 (599)
Q Consensus 23 ~rY~i~~~L--G~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l-~HpnIv~l~~v~~~~s~~~~ 99 (599)
+.|++.+.+ |+|+||.||++.++.++..+|+|.+....... .|+.+...+ +|+||+++++.+...
T Consensus 14 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~-------~e~~~~~~~~~h~~iv~~~~~~~~~----- 81 (267)
T PHA03390 14 KNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA-------IEPMVHQLMKDNPNFIKLYYSVTTL----- 81 (267)
T ss_pred HhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch-------hhHHHHHHhhcCCCEEEEEEEEecC-----
Confidence 466666666 99999999999999999999999986432111 133333323 699999999999543
Q ss_pred ccEEEEEecCC-cCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCC-ceeeeccCcccccc
Q 007541 100 KDIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADC-KLKICDFGLARVAF 177 (599)
Q Consensus 100 ~~iylV~E~~~-g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~-~lKL~DFGlA~~~~ 177 (599)
..+|+||||+. ++|.+++..+..+++..++.++.||++||.|||+.||+||||||+||+++.++ .++|+|||+++...
T Consensus 82 ~~~~iv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~ 161 (267)
T PHA03390 82 KGHVLIMDYIKDGDLFDLLKKEGKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDRAKDRIYLCDYGLCKIIG 161 (267)
T ss_pred CeeEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeCCCCeEEEecCccceecC
Confidence 47999999998 69999998887899999999999999999999999999999999999999998 99999999997653
Q ss_pred CCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhH-HHHHHHhcCCCCHHHHH
Q 007541 178 NDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQ-LDIMTDLLGTPSPEAIA 256 (599)
Q Consensus 178 ~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~-l~~I~~~lG~p~~e~i~ 256 (599)
.. ....++..|+|||++.+ ..++.++||||+||++++|++|+.||........ ...+.
T Consensus 162 ~~-------~~~~~~~~y~aPE~~~~--~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~------------ 220 (267)
T PHA03390 162 TP-------SCYDGTLDYFSPEKIKG--HNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLL------------ 220 (267)
T ss_pred CC-------ccCCCCCcccChhhhcC--CCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHH------------
Confidence 21 23467889999999976 6789999999999999999999999975432210 00000
Q ss_pred HHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHH
Q 007541 257 RVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLE 336 (599)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~ 336 (599)
... . ......+..++.+.+||.
T Consensus 221 -----------------------------------------------------~~~--~---~~~~~~~~~~~~~~~li~ 242 (267)
T PHA03390 221 -----------------------------------------------------KRQ--Q---KKLPFIKNVSKNANDFVQ 242 (267)
T ss_pred -----------------------------------------------------Hhh--c---ccCCcccccCHHHHHHHH
Confidence 000 0 001122357899999999
Q ss_pred HhcccCCCCCCC-HHHHhcCccccC
Q 007541 337 RMLAFEPKDRPT-AEEALADPYFKG 360 (599)
Q Consensus 337 ~mL~~DP~~RpT-a~e~L~HP~f~~ 360 (599)
+||+.||.+|++ ++|+|+||||..
T Consensus 243 ~~l~~~p~~R~~~~~~~l~h~~~~~ 267 (267)
T PHA03390 243 SMLKYNINYRLTNYNEIIKHPFLKI 267 (267)
T ss_pred HHhccChhhCCchHHHHhcCCcccC
Confidence 999999999996 599999999963
No 267
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=1.2e-38 Score=341.46 Aligned_cols=205 Identities=29% Similarity=0.467 Sum_probs=168.5
Q ss_pred CCceEEEEEEeecCceEEEEEEE-----CCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhc-CCCCccccceeecCCC
Q 007541 22 GSRYKIEEVIGKGSYGVVCSAYD-----TRTGEKVAIKKINDIFEHVSDATRILREIKLLRLL-RHPDIVEIKHILLPPS 95 (599)
Q Consensus 22 ~~rY~i~~~LG~G~~g~V~~a~d-----~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l-~HpnIv~l~~v~~~~s 95 (599)
.++|++.+.||+|+||+||+|.+ ..++..||||+++... .......+.+|+.+|+.+ +||||+++++++...
T Consensus 34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~- 111 (375)
T cd05104 34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSA-HLTEREALMSELKVLSYLGNHINIVNLLGACTVG- 111 (375)
T ss_pred hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCc-CcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccC-
Confidence 45899999999999999999974 4567789999986432 233456788999999999 799999999998443
Q ss_pred cCCCccEEEEEecCC-cCHHHHHHhCC-----------------------------------------------------
Q 007541 96 RREFKDIYVVFELME-SDLHQVIKAND----------------------------------------------------- 121 (599)
Q Consensus 96 ~~~~~~iylV~E~~~-g~L~~~i~~~~----------------------------------------------------- 121 (599)
...|+|||||. |+|.+++....
T Consensus 112 ----~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 187 (375)
T cd05104 112 ----GPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRR 187 (375)
T ss_pred ----CcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCccccccccccccc
Confidence 46899999999 69999886431
Q ss_pred ----------------------CCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCC
Q 007541 122 ----------------------DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFND 179 (599)
Q Consensus 122 ----------------------~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~ 179 (599)
.+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~ 267 (375)
T cd05104 188 SVRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIRND 267 (375)
T ss_pred ccccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEECCCcEEEecCccceeccCc
Confidence 3678889999999999999999999999999999999999999999999999765332
Q ss_pred CCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHh-CCCCCCCCC
Q 007541 180 TPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKN 235 (599)
Q Consensus 180 ~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLlt-G~~pF~g~~ 235 (599)
... .......++..|+|||++.+ ..++.++|||||||++++|++ |..||.+..
T Consensus 268 ~~~-~~~~~~~~~~~y~aPE~~~~--~~~~~~sDi~slG~~l~ellt~g~~p~~~~~ 321 (375)
T cd05104 268 SNY-VVKGNARLPVKWMAPESIFN--CVYTFESDVWSYGILLWEIFSLGSSPYPGMP 321 (375)
T ss_pred ccc-cccCCCCCCcceeChhHhcC--CCCCCCCCHHHHHHHHHHHHhcCCCCCCCCC
Confidence 211 11122345667999999876 678999999999999999998 889997654
No 268
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=1.1e-38 Score=337.00 Aligned_cols=255 Identities=25% Similarity=0.431 Sum_probs=199.8
Q ss_pred CCceEEEEEEeecCceEEEEEEECC-----CCcEEEEEEecCcccChhhHHHHHHHHHHHHhc-CCCCccccceeecCCC
Q 007541 22 GSRYKIEEVIGKGSYGVVCSAYDTR-----TGEKVAIKKINDIFEHVSDATRILREIKLLRLL-RHPDIVEIKHILLPPS 95 (599)
Q Consensus 22 ~~rY~i~~~LG~G~~g~V~~a~d~~-----tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l-~HpnIv~l~~v~~~~s 95 (599)
.++|++++.||+|+||.||+|++.. +++.||+|++.... .......+.+|+.+++.+ +|+||+++++++...
T Consensus 6 ~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~- 83 (337)
T cd05054 6 RDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGA-TASEYKALMTELKILIHIGHHLNVVNLLGACTKP- 83 (337)
T ss_pred HHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCC-CHHHHHHHHHHHHHHHhhccCcchhheeeeEecC-
Confidence 4689999999999999999997543 45789999987432 223445678999999999 799999999988533
Q ss_pred cCCCccEEEEEecCC-cCHHHHHHhC------------------------------------------------------
Q 007541 96 RREFKDIYVVFELME-SDLHQVIKAN------------------------------------------------------ 120 (599)
Q Consensus 96 ~~~~~~iylV~E~~~-g~L~~~i~~~------------------------------------------------------ 120 (599)
...+|+||||+. ++|.+++...
T Consensus 84 ---~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (337)
T cd05054 84 ---GGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDE 160 (337)
T ss_pred ---CCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccch
Confidence 247899999999 5899888542
Q ss_pred -------CCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCCCCCcccccccccCc
Q 007541 121 -------DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATR 193 (599)
Q Consensus 121 -------~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~~~~~~~t~~~gt~ 193 (599)
..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++....... ........++.
T Consensus 161 ~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~-~~~~~~~~~~~ 239 (337)
T cd05054 161 EGDELYKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPD-YVRKGDARLPL 239 (337)
T ss_pred hhhHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeCCCcEEEeccccchhcccCcc-hhhccCCCCCc
Confidence 2578899999999999999999999999999999999999999999999999986533221 11123345677
Q ss_pred cccCccccccccCCCCcchhhHhHHHHHHHHHh-CCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHhhhhhhhhcCCCCC
Q 007541 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVCLLLNIIWCGYDGF 272 (599)
Q Consensus 194 ~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLlt-G~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~~~~~~~~~~~~~~ 272 (599)
.|+|||++.+ ..++.++||||+||++++|++ |..||.+....+.+.....
T Consensus 240 ~y~aPE~~~~--~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~--------------------------- 290 (337)
T cd05054 240 KWMAPESIFD--KVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLK--------------------------- 290 (337)
T ss_pred cccCcHHhcC--CCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHh---------------------------
Confidence 8999999877 689999999999999999997 9999976432221111100
Q ss_pred cccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHH
Q 007541 273 MCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEA 352 (599)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL~~DP~~RpTa~e~ 352 (599)
..... ......++.+.+++.+||+.+|.+|||++|+
T Consensus 291 -----------------------------------------~~~~~---~~~~~~~~~~~~l~~~cl~~~p~~RPs~~el 326 (337)
T cd05054 291 -----------------------------------------EGTRM---RAPEYATPEIYSIMLDCWHNNPEDRPTFSEL 326 (337)
T ss_pred -----------------------------------------ccCCC---CCCccCCHHHHHHHHHHccCChhhCcCHHHH
Confidence 00000 0012456789999999999999999999999
Q ss_pred hcC
Q 007541 353 LAD 355 (599)
Q Consensus 353 L~H 355 (599)
++|
T Consensus 327 l~~ 329 (337)
T cd05054 327 VEI 329 (337)
T ss_pred HHH
Confidence 986
No 269
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=4.6e-38 Score=321.46 Aligned_cols=254 Identities=27% Similarity=0.410 Sum_probs=207.0
Q ss_pred ceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEE
Q 007541 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIY 103 (599)
Q Consensus 24 rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~iy 103 (599)
-|++++.||+|+||.||+|.+..+++.||||++.... .......+.+|+.+++.++|+||+++++.+. +...+|
T Consensus 5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-----~~~~~~ 78 (277)
T cd06641 5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEE-AEDEIEDIQQEITVLSQCDSPYVTKYYGSYL-----KDTKLW 78 (277)
T ss_pred hhhhheeEeecCCeEEEEEEECCCCcEEEEEEecccc-chHHHHHHHHHHHHHHhcCCCCEeEEEEEEE-----eCCeEE
Confidence 4778899999999999999999999999999876422 2234467889999999999999999999984 335799
Q ss_pred EEEecCC-cCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCCCCC
Q 007541 104 VVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPT 182 (599)
Q Consensus 104 lV~E~~~-g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~~~ 182 (599)
+||||++ ++|.+++.. ..+++..+..++.||+.+|.|||+.|++|+||||+||+++.++.++|+|||++........
T Consensus 79 lv~e~~~~~~l~~~i~~-~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~- 156 (277)
T cd06641 79 IIMEYLGGGSALDLLEP-GPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI- 156 (277)
T ss_pred EEEEeCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEECCCCCEEEeecccceecccchh-
Confidence 9999999 588888865 4689999999999999999999999999999999999999999999999999876532211
Q ss_pred cccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHhhhh
Q 007541 183 AIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVCLLL 262 (599)
Q Consensus 183 ~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~~~~ 262 (599)
......++.+|+|||.+.. ..++.++|+||+||++++|++|..||...+.......+..
T Consensus 157 --~~~~~~~~~~y~~PE~~~~--~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~----------------- 215 (277)
T cd06641 157 --KRNTFVGTPFWMAPEVIKQ--SAYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFLIPK----------------- 215 (277)
T ss_pred --hhccccCCccccChhhhcc--CCCCchhhHHHHHHHHHHHHcCCCCCCccchHHHHHHHhc-----------------
Confidence 1233467889999999876 5788899999999999999999999976443222221100
Q ss_pred hhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHhcccC
Q 007541 263 NIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFE 342 (599)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL~~D 342 (599)
.. ........+..+.++|.+||+.|
T Consensus 216 ----------------------------------------------------~~---~~~~~~~~~~~~~~~i~~~l~~~ 240 (277)
T cd06641 216 ----------------------------------------------------NN---PPTLEGNYSKPLKEFVEACLNKE 240 (277)
T ss_pred ----------------------------------------------------CC---CCCCCcccCHHHHHHHHHHccCC
Confidence 00 00112346788999999999999
Q ss_pred CCCCCCHHHHhcCccccCc
Q 007541 343 PKDRPTAEEALADPYFKGL 361 (599)
Q Consensus 343 P~~RpTa~e~L~HP~f~~~ 361 (599)
|.+||++.++|+||||...
T Consensus 241 p~~Rp~~~~~l~~~~~~~~ 259 (277)
T cd06641 241 PSFRPTAKELLKHKFIVRF 259 (277)
T ss_pred hhhCcCHHHHHhCHHHhhh
Confidence 9999999999999999864
No 270
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=3.3e-39 Score=311.66 Aligned_cols=212 Identities=26% Similarity=0.412 Sum_probs=178.7
Q ss_pred cCCCCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCC
Q 007541 19 YGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRRE 98 (599)
Q Consensus 19 ~~~~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~ 98 (599)
.-.++||.|.+.||.|+|+-|+++.+..+++.||+|+|.... ..+.+.+++|+..-++++||||+++++.......+.
T Consensus 17 ~In~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~--~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~ 94 (302)
T KOG2345|consen 17 IINNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHS--QEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDG 94 (302)
T ss_pred EEcCceEEEeeeecCCCceeeeeecccCcccchhhheeeccc--hHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccC
Confidence 345799999999999999999999999999999999997543 466788899999999999999999999887655455
Q ss_pred CccEEEEEecCC-cCHHHHHHh----CCCCCHHHHHHHHHHHHhhhhhcccCc--eEeecCCCCcEEeCCCCceeeeccC
Q 007541 99 FKDIYVVFELME-SDLHQVIKA----NDDLTPEHYQFFLYQLLRGLKYIHTAN--VFHRDLKPKNILANADCKLKICDFG 171 (599)
Q Consensus 99 ~~~iylV~E~~~-g~L~~~i~~----~~~lse~~i~~i~~QLl~aL~yLHs~g--IvHrDLKP~NILv~~~~~lKL~DFG 171 (599)
....|||++|.. |+|.+.|.. ...++|.++..|+.+|++||++||+.. ..||||||.|||+.+.+..+|.|||
T Consensus 95 ~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~~~~~vl~D~G 174 (302)
T KOG2345|consen 95 KHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSDSGLPVLMDLG 174 (302)
T ss_pred ceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecCCCceEEEecc
Confidence 667999999998 889998864 237999999999999999999999999 9999999999999999999999999
Q ss_pred ccccccCCCCCc------ccccccccCccccCcccccc-ccCCCCcchhhHhHHHHHHHHHhCCCCCC
Q 007541 172 LARVAFNDTPTA------IFWTDYVATRWYRAPELCGS-FFSKYTPAIDIWSIGCIFAELLTGKPLFP 232 (599)
Q Consensus 172 lA~~~~~~~~~~------~~~t~~~gt~~Y~APE~l~~-~~~~ys~~~DIWSlG~Il~eLltG~~pF~ 232 (599)
+++...-..... -.+..-..|..|||||++.- .....+.++|||||||+||.|+.|..||.
T Consensus 175 S~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe 242 (302)
T KOG2345|consen 175 SATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFE 242 (302)
T ss_pred CccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcch
Confidence 997542111110 01233457889999998743 12457889999999999999999999994
No 271
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=3.5e-39 Score=364.61 Aligned_cols=264 Identities=32% Similarity=0.480 Sum_probs=200.5
Q ss_pred CceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCC-------
Q 007541 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPS------- 95 (599)
Q Consensus 23 ~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s------- 95 (599)
..|+.+++||+|+||.||+++++-.|+.||||+|.... ......+++||+.+|.+|+|||||+++..|....
T Consensus 479 ~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~-s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~~e 557 (1351)
T KOG1035|consen 479 NDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKA-SDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTVLE 557 (1351)
T ss_pred hhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCch-HHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCcccccc
Confidence 34677899999999999999999999999999998655 4556678999999999999999999866551000
Q ss_pred ----------------------------------------------c--------------------CC-----------
Q 007541 96 ----------------------------------------------R--------------------RE----------- 98 (599)
Q Consensus 96 ----------------------------------------------~--------------------~~----------- 98 (599)
. ++
T Consensus 558 i~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~~e 637 (1351)
T KOG1035|consen 558 IVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSDSE 637 (1351)
T ss_pred ccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccccC
Confidence 0 00
Q ss_pred ----------------------C--------ccEEEEEecCCcCH-HHHHHhCCCC-CHHHHHHHHHHHHhhhhhcccCc
Q 007541 99 ----------------------F--------KDIYVVFELMESDL-HQVIKANDDL-TPEHYQFFLYQLLRGLKYIHTAN 146 (599)
Q Consensus 99 ----------------------~--------~~iylV~E~~~g~L-~~~i~~~~~l-se~~i~~i~~QLl~aL~yLHs~g 146 (599)
. ..+||-||||+.+| .++|..+... ..+.++++|+||++||.|+|++|
T Consensus 638 ~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYIH~~g 717 (1351)
T KOG1035|consen 638 GSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYIHDQG 717 (1351)
T ss_pred CccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHhCc
Confidence 0 24899999999655 4555554332 47889999999999999999999
Q ss_pred eEeecCCCCcEEeCCCCceeeeccCcccccc--------------CC-CCCcccccccccCccccCcccccccc-CCCCc
Q 007541 147 VFHRDLKPKNILANADCKLKICDFGLARVAF--------------ND-TPTAIFWTDYVATRWYRAPELCGSFF-SKYTP 210 (599)
Q Consensus 147 IvHrDLKP~NILv~~~~~lKL~DFGlA~~~~--------------~~-~~~~~~~t~~~gt~~Y~APE~l~~~~-~~ys~ 210 (599)
||||||||.||++++++.|||+|||+|.... +. .......|..+||..|+|||++.+.. ..|+.
T Consensus 718 iIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~~Yn~ 797 (1351)
T KOG1035|consen 718 IIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSNKYNS 797 (1351)
T ss_pred eeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccccccccc
Confidence 9999999999999999999999999998621 00 01112457889999999999997742 26999
Q ss_pred chhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhh
Q 007541 211 AIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFF 290 (599)
Q Consensus 211 ~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (599)
++||||||+|||||+. ||...- +..
T Consensus 798 KiDmYSLGIVlFEM~y---PF~TsM--ERa-------------------------------------------------- 822 (1351)
T KOG1035|consen 798 KIDMYSLGIVLFEMLY---PFGTSM--ERA-------------------------------------------------- 822 (1351)
T ss_pred hhhhHHHHHHHHHHhc---cCCchH--HHH--------------------------------------------------
Confidence 9999999999999983 364321 111
Q ss_pred HHHHHHhhhcccHHHHHHHHhcccCCCCCC-CCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccc
Q 007541 291 TEVLILHCQVRNEKARRYLSSMRKKKPIPF-SQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFK 359 (599)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~a~dLL~~mL~~DP~~RpTa~e~L~HP~f~ 359 (599)
..+.++++ ...+. ...+-+.-+....+|+.||+.||.+||||.|+|++.||-
T Consensus 823 ----------------~iL~~LR~-g~iP~~~~f~~~~~~~e~slI~~Ll~hdP~kRPtA~eLL~s~llp 875 (1351)
T KOG1035|consen 823 ----------------SILTNLRK-GSIPEPADFFDPEHPEEASLIRWLLSHDPSKRPTATELLNSELLP 875 (1351)
T ss_pred ----------------HHHHhccc-CCCCCCcccccccchHHHHHHHHHhcCCCccCCCHHHHhhccCCC
Confidence 11222221 11111 222333445678999999999999999999999999986
No 272
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=4.1e-38 Score=328.63 Aligned_cols=253 Identities=23% Similarity=0.369 Sum_probs=200.9
Q ss_pred CCCceEEEEEEeecCceEEEEEEECCCCcE----EEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCc
Q 007541 21 EGSRYKIEEVIGKGSYGVVCSAYDTRTGEK----VAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSR 96 (599)
Q Consensus 21 ~~~rY~i~~~LG~G~~g~V~~a~d~~tg~~----vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~ 96 (599)
...+|++.+.||+|+||+||+|.+..+++. ||||+++.. .......++.+|+.+++.++||||+++++++...
T Consensus 5 ~~~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-- 81 (316)
T cd05108 5 KETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA-TSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-- 81 (316)
T ss_pred chhhceeeeeeecCCCceEEEEEEecCCCccceeEEEEecccc-CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC--
Confidence 356799999999999999999998776654 899998642 2233456788999999999999999999998542
Q ss_pred CCCccEEEEEecCC-cCHHHHHHhCC-CCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccc
Q 007541 97 REFKDIYVVFELME-SDLHQVIKAND-DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLAR 174 (599)
Q Consensus 97 ~~~~~iylV~E~~~-g~L~~~i~~~~-~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~ 174 (599)
..++|+||+. |+|.+++..+. .+++..+..++.||+.||+|||+.||+||||||+|||++.++.+||+|||+++
T Consensus 82 ----~~~~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill~~~~~~kl~DfG~a~ 157 (316)
T cd05108 82 ----TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLVKTPQHVKITDFGLAK 157 (316)
T ss_pred ----CceeeeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEecCCCcEEEccccccc
Confidence 4689999998 79999998753 68899999999999999999999999999999999999999999999999998
Q ss_pred cccCCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHh-CCCCCCCCChhhHHHHHHHhcCCCCHH
Q 007541 175 VAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLLGTPSPE 253 (599)
Q Consensus 175 ~~~~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLlt-G~~pF~g~~~~~~l~~I~~~lG~p~~e 253 (599)
........ .......++..|+|||.+.. ..++.++|||||||++|+|++ |..||.+....+....+..
T Consensus 158 ~~~~~~~~-~~~~~~~~~~~y~apE~~~~--~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~~~~~~~~-------- 226 (316)
T cd05108 158 LLGADEKE-YHAEGGKVPIKWMALESILH--RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEK-------- 226 (316)
T ss_pred cccCCCcc-eeccCCccceeecChHHhcc--CCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhC--------
Confidence 75432221 11122344667999999876 678999999999999999997 9999977543322111100
Q ss_pred HHHHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHH
Q 007541 254 AIARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALR 333 (599)
Q Consensus 254 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~d 333 (599)
.... ...+..+..+.+
T Consensus 227 -------------------------------------------------------------~~~~---~~~~~~~~~~~~ 242 (316)
T cd05108 227 -------------------------------------------------------------GERL---PQPPICTIDVYM 242 (316)
T ss_pred -------------------------------------------------------------CCCC---CCCCCCCHHHHH
Confidence 0000 011345677899
Q ss_pred HHHHhcccCCCCCCCHHHHhcC
Q 007541 334 LLERMLAFEPKDRPTAEEALAD 355 (599)
Q Consensus 334 LL~~mL~~DP~~RpTa~e~L~H 355 (599)
++.+||..||.+|||+.+++.+
T Consensus 243 li~~cl~~~p~~Rps~~~l~~~ 264 (316)
T cd05108 243 IMVKCWMIDADSRPKFRELIIE 264 (316)
T ss_pred HHHHHccCChhhCcCHHHHHHH
Confidence 9999999999999999999986
No 273
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=9.3e-38 Score=310.97 Aligned_cols=251 Identities=32% Similarity=0.545 Sum_probs=207.3
Q ss_pred ceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEE
Q 007541 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIY 103 (599)
Q Consensus 24 rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~iy 103 (599)
.|.+.+.||+|++|.||++.+..+++.|++|++..... .....+.+|+.+++.++|+||+++.+++... ...|
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-----~~~~ 73 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESK--EKKEKIINEIQILKKCKHPNIVKYYGSYLKK-----DELW 73 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccch--hHHHHHHHHHHHHHhCCCCCEeEEEEEEecC-----CeEE
Confidence 48899999999999999999999999999999875332 3556788999999999999999999998543 4789
Q ss_pred EEEecCC-cCHHHHHHhC-CCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCCCC
Q 007541 104 VVFELME-SDLHQVIKAN-DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTP 181 (599)
Q Consensus 104 lV~E~~~-g~L~~~i~~~-~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~~ 181 (599)
+|+||++ ++|.+++... ..+++..+..++.||+.+|++||++|++|+||+|+||+++.++.++|+|||.+........
T Consensus 74 l~~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~ 153 (253)
T cd05122 74 IVMEFCSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA 153 (253)
T ss_pred EEEecCCCCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEEccCCeEEEeecccccccccccc
Confidence 9999999 6999999876 5799999999999999999999999999999999999999999999999999977643321
Q ss_pred CcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHhhh
Q 007541 182 TAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVCLL 261 (599)
Q Consensus 182 ~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~~~ 261 (599)
.....++..|+|||.+.+ ..++.++||||+||++++|++|+.||...+....+..+.. ..
T Consensus 154 ----~~~~~~~~~~~~PE~~~~--~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~-~~------------- 213 (253)
T cd05122 154 ----RNTMVGTPYWMAPEVING--KPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIAT-NG------------- 213 (253)
T ss_pred ----ccceecCCcccCHHHHcC--CCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHh-cC-------------
Confidence 234567888999999876 4688999999999999999999999976653332222211 00
Q ss_pred hhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHhccc
Q 007541 262 LNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAF 341 (599)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL~~ 341 (599)
...+ ......+..+.+||.+||+.
T Consensus 214 -------------------------------------------------------~~~~-~~~~~~~~~~~~~i~~~l~~ 237 (253)
T cd05122 214 -------------------------------------------------------PPGL-RNPEKWSDEFKDFLKKCLQK 237 (253)
T ss_pred -------------------------------------------------------CCCc-CcccccCHHHHHHHHHHccC
Confidence 0000 00011367899999999999
Q ss_pred CCCCCCCHHHHhcCcc
Q 007541 342 EPKDRPTAEEALADPY 357 (599)
Q Consensus 342 DP~~RpTa~e~L~HP~ 357 (599)
||++|||+.|+|+|||
T Consensus 238 ~p~~R~t~~~~l~~~~ 253 (253)
T cd05122 238 NPEKRPTAEQLLKHPF 253 (253)
T ss_pred ChhhCCCHHHHhcCCC
Confidence 9999999999999999
No 274
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=4.4e-38 Score=321.60 Aligned_cols=253 Identities=22% Similarity=0.379 Sum_probs=200.3
Q ss_pred CCceEEEEEEeecCceEEEEEEECC-----CCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCc
Q 007541 22 GSRYKIEEVIGKGSYGVVCSAYDTR-----TGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSR 96 (599)
Q Consensus 22 ~~rY~i~~~LG~G~~g~V~~a~d~~-----tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~ 96 (599)
.+.|++.+.||+|++|.||+|.+.. ++..||+|.+.... .......+.+|+.+++.++|+||+++++++...
T Consensus 5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-- 81 (277)
T cd05036 5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESC-SEQDESDFLMEALIMSKFNHQNIVRLIGVSFER-- 81 (277)
T ss_pred HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCC-CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccC--
Confidence 4679999999999999999999987 78899999876422 223345688999999999999999999988543
Q ss_pred CCCccEEEEEecCC-cCHHHHHHhCC-------CCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCC---ce
Q 007541 97 REFKDIYVVFELME-SDLHQVIKAND-------DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADC---KL 165 (599)
Q Consensus 97 ~~~~~iylV~E~~~-g~L~~~i~~~~-------~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~---~l 165 (599)
...|+||||+. ++|.+++.... .+++..+..++.||+.||.|||++|++||||||+|||++.++ .+
T Consensus 82 ---~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~~~~~~ 158 (277)
T cd05036 82 ---LPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVA 158 (277)
T ss_pred ---CCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchheEEEeccCCCcce
Confidence 46799999997 69999997653 488999999999999999999999999999999999998765 59
Q ss_pred eeeccCccccccCCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHh-CCCCCCCCChhhHHHHHH
Q 007541 166 KICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMT 244 (599)
Q Consensus 166 KL~DFGlA~~~~~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLlt-G~~pF~g~~~~~~l~~I~ 244 (599)
||+|||+++......... .......+..|+|||++.+ ..++.++|||||||++++|++ |+.||.+.+..+....+.
T Consensus 159 kl~dfg~~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~--~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~~~~~~~ 235 (277)
T cd05036 159 KIADFGMARDIYRASYYR-KGGRAMLPIKWMPPEAFLD--GIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEVMEFVT 235 (277)
T ss_pred EeccCccccccCCcccee-cCCCCCccHhhCCHHHHhc--CCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH
Confidence 999999998653221110 0112233567999999876 679999999999999999997 999998766544332221
Q ss_pred HhcCCCCHHHHHHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCC
Q 007541 245 DLLGTPSPEAIARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKF 324 (599)
Q Consensus 245 ~~lG~p~~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (599)
.. ... ...
T Consensus 236 ~~---------------------------------------------------------------------~~~---~~~ 243 (277)
T cd05036 236 GG---------------------------------------------------------------------GRL---DPP 243 (277)
T ss_pred cC---------------------------------------------------------------------CcC---CCC
Confidence 10 000 011
Q ss_pred CCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 007541 325 PNANPLALRLLERMLAFEPKDRPTAEEALAD 355 (599)
Q Consensus 325 ~~~s~~a~dLL~~mL~~DP~~RpTa~e~L~H 355 (599)
...+..+.+||.+||+.||++|||+.++|+|
T Consensus 244 ~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~ 274 (277)
T cd05036 244 KGCPGPVYRIMTDCWQHTPEDRPNFATILER 274 (277)
T ss_pred CCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 3457789999999999999999999999986
No 275
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=5.8e-38 Score=317.16 Aligned_cols=248 Identities=25% Similarity=0.401 Sum_probs=200.0
Q ss_pred CCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCcc
Q 007541 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKD 101 (599)
Q Consensus 22 ~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~ 101 (599)
.++|+++++||+|++|.||+|.+. ++..||+|.+... ....+.+.+|+.+++.++|+||+++++++.. ...
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~-~~~~v~iK~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~ 75 (261)
T cd05072 5 RESIKLVKKLGAGQFGEVWMGYYN-NSTKVAVKTLKPG---TMSVQAFLEEANLMKTLQHDKLVRLYAVVTK-----EEP 75 (261)
T ss_pred hHHeEEeeecCCcCCceEEEEEec-CCceEEEEEccCC---chhHHHHHHHHHHHHhCCCCCeeeEEEEEcC-----CCC
Confidence 468999999999999999999864 5677999987642 2245678899999999999999999998843 346
Q ss_pred EEEEEecCC-cCHHHHHHhC--CCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccC
Q 007541 102 IYVVFELME-SDLHQVIKAN--DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFN 178 (599)
Q Consensus 102 iylV~E~~~-g~L~~~i~~~--~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~ 178 (599)
.|+||||+. ++|.+++... ..+++..+..++.||+.||+|||+.|++||||||+|||++.++.+||+|||+++....
T Consensus 76 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~ 155 (261)
T cd05072 76 IYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIED 155 (261)
T ss_pred cEEEEecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEecCCCcEEECCCccceecCC
Confidence 899999997 6999998753 4688999999999999999999999999999999999999999999999999987543
Q ss_pred CCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHh-CCCCCCCCChhhHHHHHHHhcCCCCHHHHHH
Q 007541 179 DTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLLGTPSPEAIAR 257 (599)
Q Consensus 179 ~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLlt-G~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~ 257 (599)
.... ......++..|+|||.+.. ..++.++|||||||++|+|++ |+.||.+.........+....
T Consensus 156 ~~~~--~~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~---------- 221 (261)
T cd05072 156 NEYT--AREGAKFPIKWTAPEAINF--GSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQRGY---------- 221 (261)
T ss_pred Ccee--ccCCCccceecCCHHHhcc--CCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHHHHHHcCC----------
Confidence 2211 1123345678999999876 578899999999999999998 999998765443332221100
Q ss_pred HhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHH
Q 007541 258 VCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLER 337 (599)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~ 337 (599)
.. ......+..+.+|+.+
T Consensus 222 -----------------------------------------------------------~~---~~~~~~~~~~~~li~~ 239 (261)
T cd05072 222 -----------------------------------------------------------RM---PRMENCPDELYDIMKT 239 (261)
T ss_pred -----------------------------------------------------------CC---CCCCCCCHHHHHHHHH
Confidence 00 1123467789999999
Q ss_pred hcccCCCCCCCHHHHhc
Q 007541 338 MLAFEPKDRPTAEEALA 354 (599)
Q Consensus 338 mL~~DP~~RpTa~e~L~ 354 (599)
||..||++|||++++++
T Consensus 240 ~l~~~p~~Rp~~~~i~~ 256 (261)
T cd05072 240 CWKEKAEERPTFDYLQS 256 (261)
T ss_pred HccCCcccCcCHHHHHH
Confidence 99999999999999875
No 276
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=5.6e-38 Score=327.98 Aligned_cols=258 Identities=28% Similarity=0.422 Sum_probs=209.2
Q ss_pred CCCCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCccc-ChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCC
Q 007541 20 GEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFE-HVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRRE 98 (599)
Q Consensus 20 ~~~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~-~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~ 98 (599)
.....|...+.||+|+||.||+|.+..++..||||++..... .......+.+|+.+|+.++|+|++++++++...
T Consensus 22 ~~~~~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~---- 97 (317)
T cd06635 22 DPEKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLRE---- 97 (317)
T ss_pred CchhhhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeC----
Confidence 344558999999999999999999999999999999864322 223446788999999999999999999998543
Q ss_pred CccEEEEEecCCcCHHHHHHh-CCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCcccccc
Q 007541 99 FKDIYVVFELMESDLHQVIKA-NDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAF 177 (599)
Q Consensus 99 ~~~iylV~E~~~g~L~~~i~~-~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~ 177 (599)
...|+||||+.++|.+++.. ...+++..+..++.||+.||.|||+.||+||||+|+||+++.++.+||+|||++....
T Consensus 98 -~~~~lv~e~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~ 176 (317)
T cd06635 98 -HTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASIAS 176 (317)
T ss_pred -CeEEEEEeCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEECCCCCEEEecCCCccccC
Confidence 46899999999999888765 4568999999999999999999999999999999999999999999999999986542
Q ss_pred CCCCCcccccccccCccccCcccccc-ccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHH
Q 007541 178 NDTPTAIFWTDYVATRWYRAPELCGS-FFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIA 256 (599)
Q Consensus 178 ~~~~~~~~~t~~~gt~~Y~APE~l~~-~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~ 256 (599)
.. ....++..|+|||.+.. ....++.++||||+||++++|++|++||.+.+....+..+.....
T Consensus 177 ~~-------~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~-------- 241 (317)
T cd06635 177 PA-------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNES-------- 241 (317)
T ss_pred Cc-------ccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhccC--------
Confidence 21 23467889999998742 124688999999999999999999999876554333332221100
Q ss_pred HHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHH
Q 007541 257 RVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLE 336 (599)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~ 336 (599)
+ .......++.+.+||.
T Consensus 242 ------------------------------------------------------------~---~~~~~~~~~~l~~li~ 258 (317)
T cd06635 242 ------------------------------------------------------------P---TLQSNEWSDYFRNFVD 258 (317)
T ss_pred ------------------------------------------------------------C---CCCCccccHHHHHHHH
Confidence 0 0011235678999999
Q ss_pred HhcccCCCCCCCHHHHhcCccccC
Q 007541 337 RMLAFEPKDRPTAEEALADPYFKG 360 (599)
Q Consensus 337 ~mL~~DP~~RpTa~e~L~HP~f~~ 360 (599)
+||+.||.+|||+.++++|+|+..
T Consensus 259 ~~l~~~p~~Rpt~~~il~~~~~~~ 282 (317)
T cd06635 259 SCLQKIPQDRPTSEELLKHMFVLR 282 (317)
T ss_pred HHccCCcccCcCHHHHHhChhhhc
Confidence 999999999999999999999954
No 277
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=100.00 E-value=5.5e-38 Score=326.71 Aligned_cols=259 Identities=27% Similarity=0.411 Sum_probs=208.6
Q ss_pred CCCCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcc-cChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCC
Q 007541 20 GEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIF-EHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRRE 98 (599)
Q Consensus 20 ~~~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~-~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~ 98 (599)
....+|++.+.||+|+||.||+|+++.+++.||||.+.... .......++.+|+.+++.++|+|++++.+++...
T Consensus 12 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~---- 87 (308)
T cd06634 12 DPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLRE---- 87 (308)
T ss_pred CcHHHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcC----
Confidence 34567888999999999999999999999999999986432 2223446788999999999999999999998543
Q ss_pred CccEEEEEecCCcCHHHHHHh-CCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCcccccc
Q 007541 99 FKDIYVVFELMESDLHQVIKA-NDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAF 177 (599)
Q Consensus 99 ~~~iylV~E~~~g~L~~~i~~-~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~ 177 (599)
...|+||||+.++|.+++.. ...+++..+..++.||+.||.|||+.|++||||||+|||++.++.+||+|||++....
T Consensus 88 -~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~ 166 (308)
T cd06634 88 -HTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMA 166 (308)
T ss_pred -CeeEEEEEccCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEECCCCcEEECCcccceeec
Confidence 46899999999999888764 4468999999999999999999999999999999999999999999999999987643
Q ss_pred CCCCCcccccccccCccccCccccccc-cCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHH
Q 007541 178 NDTPTAIFWTDYVATRWYRAPELCGSF-FSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIA 256 (599)
Q Consensus 178 ~~~~~~~~~t~~~gt~~Y~APE~l~~~-~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~ 256 (599)
.. ....++..|+|||.+.+. ...++.++|||||||++++|++|..||.+.+..+.+..+...
T Consensus 167 ~~-------~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~---------- 229 (308)
T cd06634 167 PA-------NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN---------- 229 (308)
T ss_pred Cc-------ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHHHHHhhc----------
Confidence 21 234678899999987431 145788999999999999999999998665433222211100
Q ss_pred HHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHH
Q 007541 257 RVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLE 336 (599)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~ 336 (599)
..+ .......+..+.+||+
T Consensus 230 ----------------------------------------------------------~~~---~~~~~~~~~~~~~li~ 248 (308)
T cd06634 230 ----------------------------------------------------------ESP---ALQSGHWSEYFRNFVD 248 (308)
T ss_pred ----------------------------------------------------------CCC---CcCcccccHHHHHHHH
Confidence 000 0011246678999999
Q ss_pred HhcccCCCCCCCHHHHhcCccccCc
Q 007541 337 RMLAFEPKDRPTAEEALADPYFKGL 361 (599)
Q Consensus 337 ~mL~~DP~~RpTa~e~L~HP~f~~~ 361 (599)
+||..+|.+|||++++++|||+...
T Consensus 249 ~cl~~~P~~Rp~~~~ll~~~~~~~~ 273 (308)
T cd06634 249 SCLQKIPQDRPTSEVLLKHRFVLRE 273 (308)
T ss_pred HHhhCCcccCCCHHHHhhCcccccc
Confidence 9999999999999999999999874
No 278
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=5.3e-38 Score=322.29 Aligned_cols=261 Identities=32% Similarity=0.523 Sum_probs=214.5
Q ss_pred ccCCCCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcC
Q 007541 18 EYGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRR 97 (599)
Q Consensus 18 ~~~~~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~ 97 (599)
.-+..+.|++...||+|++|.||+|.+..++..||+|++..... ....+.+|+.+|+.++|+||+++++.+...
T Consensus 14 ~~~~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--- 87 (286)
T cd06614 14 EGDPRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ---NKELIINEILIMKDCKHPNIVDYYDSYLVG--- 87 (286)
T ss_pred CCCccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch---hHHHHHHHHHHHHHCCCCCeeEEEEEEEEC---
Confidence 34667889999999999999999999999999999999874322 456778999999999999999999998543
Q ss_pred CCccEEEEEecCC-cCHHHHHHhCC-CCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCcccc
Q 007541 98 EFKDIYVVFELME-SDLHQVIKAND-DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARV 175 (599)
Q Consensus 98 ~~~~iylV~E~~~-g~L~~~i~~~~-~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~ 175 (599)
..+|+|+||++ ++|.+++.... .+++..+..++.||+.||.|||+.||+|+||+|+||+++.++.+||+|||++..
T Consensus 88 --~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~ 165 (286)
T cd06614 88 --DELWVVMEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLSKDGSVKLADFGFAAQ 165 (286)
T ss_pred --CEEEEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEEcCCCCEEECccchhhh
Confidence 47999999999 69999998876 899999999999999999999999999999999999999999999999999865
Q ss_pred ccCCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHH
Q 007541 176 AFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAI 255 (599)
Q Consensus 176 ~~~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i 255 (599)
...... ......++..|+|||++.+ ..++.++|+||||||+|+|++|+.||.+.+.......+...
T Consensus 166 ~~~~~~---~~~~~~~~~~y~~PE~~~~--~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~~~~~--------- 231 (286)
T cd06614 166 LTKEKS---KRNSVVGTPYWMAPEVIKR--KDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLITTK--------- 231 (286)
T ss_pred hccchh---hhccccCCcccCCHhHhcC--CCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc---------
Confidence 432211 1123357788999999876 57899999999999999999999999766544322222110
Q ss_pred HHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHH
Q 007541 256 ARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLL 335 (599)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL 335 (599)
.. ........++..+.+||
T Consensus 232 ------------------------------------------------------------~~-~~~~~~~~~~~~l~~li 250 (286)
T cd06614 232 ------------------------------------------------------------GI-PPLKNPEKWSPEFKDFL 250 (286)
T ss_pred ------------------------------------------------------------CC-CCCcchhhCCHHHHHHH
Confidence 00 00011123577899999
Q ss_pred HHhcccCCCCCCCHHHHhcCccccCc
Q 007541 336 ERMLAFEPKDRPTAEEALADPYFKGL 361 (599)
Q Consensus 336 ~~mL~~DP~~RpTa~e~L~HP~f~~~ 361 (599)
.+||+.||.+|||+.++|+|+||+..
T Consensus 251 ~~~l~~~p~~Rpt~~~il~~~~~~~~ 276 (286)
T cd06614 251 NKCLVKDPEKRPSAEELLQHPFLKKA 276 (286)
T ss_pred HHHhccChhhCcCHHHHhhChHhhcc
Confidence 99999999999999999999999974
No 279
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=5.8e-38 Score=317.91 Aligned_cols=202 Identities=29% Similarity=0.489 Sum_probs=172.0
Q ss_pred CceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcc-cChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCcc
Q 007541 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIF-EHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKD 101 (599)
Q Consensus 23 ~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~-~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~ 101 (599)
++|++.+.||+|+||.||+|+++.+++.||||+++... ........+.+|+.+|+.++||||+++++++... ..
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~ 76 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIED-----NE 76 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEEC-----Ce
Confidence 58999999999999999999999999999999886422 2334455678999999999999999999988533 47
Q ss_pred EEEEEecCC-cCHHHHHHh----CCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccc
Q 007541 102 IYVVFELME-SDLHQVIKA----NDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVA 176 (599)
Q Consensus 102 iylV~E~~~-g~L~~~i~~----~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~ 176 (599)
+|+|+||++ ++|.+++.. ...+++..+..++.||+.||.|||++||+|+||||+|||++.++.++|+|||++...
T Consensus 77 ~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~ 156 (267)
T cd08228 77 LNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFF 156 (267)
T ss_pred EEEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEEcCCCCEEECccccceec
Confidence 899999999 589888753 345899999999999999999999999999999999999999999999999999765
Q ss_pred cCCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCC
Q 007541 177 FNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGK 234 (599)
Q Consensus 177 ~~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~ 234 (599)
..... ......++..|+|||.+.+ ..++.++||||+||++++|++|+.||...
T Consensus 157 ~~~~~---~~~~~~~~~~~~aPE~~~~--~~~~~~~Di~slG~~l~el~~g~~p~~~~ 209 (267)
T cd08228 157 SSKTT---AAHSLVGTPYYMSPERIHE--NGYNFKSDIWSLGCLLYEMAALQSPFYGD 209 (267)
T ss_pred cchhH---HHhcCCCCccccChhhhcc--CCCCchhhHHHHHHHHHHHhcCCCCCccc
Confidence 32221 1223468889999999876 57889999999999999999999998654
No 280
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=7.9e-38 Score=315.53 Aligned_cols=247 Identities=26% Similarity=0.393 Sum_probs=198.7
Q ss_pred CceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccE
Q 007541 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDI 102 (599)
Q Consensus 23 ~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~i 102 (599)
++|++.+.||+|+||.||++..+ .+..+|+|.+... ......+.+|+.+|+.++||||+++++++.. ...+
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~-~~~~~a~K~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~ 74 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWR-AQIKVAIKAINEG---AMSEEDFIEEAKVMMKLSHPKLVQLYGVCTQ-----QKPL 74 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEec-cCceEEEEecccC---CccHHHHHHHHHHHHHCCCCCceeEEEEEcc-----CCCE
Confidence 57899999999999999999875 4568999987632 2234567889999999999999999999843 3478
Q ss_pred EEEEecCC-cCHHHHHHhC-CCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCCC
Q 007541 103 YVVFELME-SDLHQVIKAN-DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT 180 (599)
Q Consensus 103 ylV~E~~~-g~L~~~i~~~-~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~ 180 (599)
|+||||+. ++|.+++... +.+++..+..++.||+.||.|||++||+||||||+||+++.++.+||+|||+++......
T Consensus 75 ~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~ 154 (256)
T cd05114 75 YIVTEFMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDE 154 (256)
T ss_pred EEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEEcCCCeEEECCCCCccccCCCc
Confidence 99999998 6999998754 468999999999999999999999999999999999999999999999999997643222
Q ss_pred CCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHh-CCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHh
Q 007541 181 PTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVC 259 (599)
Q Consensus 181 ~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLlt-G~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~ 259 (599)
.. ......++..|+|||.+.. ..++.++||||+||++++|++ |+.||.+.+..+.+..+....
T Consensus 155 ~~--~~~~~~~~~~y~aPE~~~~--~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~i~~~~------------ 218 (256)
T cd05114 155 YT--SSSGAKFPVKWSPPEVFNF--SKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRGF------------ 218 (256)
T ss_pred ee--ccCCCCCchhhCChhhccc--CccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCC------------
Confidence 11 1122345567999999876 678999999999999999999 899998776555444432210
Q ss_pred hhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHhc
Q 007541 260 LLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERML 339 (599)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL 339 (599)
.... ....+..+.+||.+||
T Consensus 219 ---------------------------------------------------------~~~~---~~~~~~~~~~li~~c~ 238 (256)
T cd05114 219 ---------------------------------------------------------RLYR---PKLASMTVYEVMYSCW 238 (256)
T ss_pred ---------------------------------------------------------CCCC---CCCCCHHHHHHHHHHc
Confidence 0000 0124567899999999
Q ss_pred ccCCCCCCCHHHHhc
Q 007541 340 AFEPKDRPTAEEALA 354 (599)
Q Consensus 340 ~~DP~~RpTa~e~L~ 354 (599)
+.||.+|||++++++
T Consensus 239 ~~~p~~Rps~~~l~~ 253 (256)
T cd05114 239 HEKPEGRPTFAELLR 253 (256)
T ss_pred cCCcccCcCHHHHHH
Confidence 999999999999985
No 281
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=6.7e-38 Score=314.45 Aligned_cols=246 Identities=26% Similarity=0.432 Sum_probs=201.9
Q ss_pred EEEeecCceEEEEEEECCC---CcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEEEE
Q 007541 29 EVIGKGSYGVVCSAYDTRT---GEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVV 105 (599)
Q Consensus 29 ~~LG~G~~g~V~~a~d~~t---g~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~iylV 105 (599)
+.||+|+||.||+|.+... +..||+|++....... ....+.+|+.+++.++|+||+++++++.. ...+++|
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-----~~~~~lv 74 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEE-ERKDFLKEARVMKKLGHPNVVRLLGVCTE-----EEPLYLV 74 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchh-HHHHHHHHHHHHhhcCCCChheeeeeecC-----CCceEEE
Confidence 4699999999999999876 8999999997643332 46778899999999999999999999854 3579999
Q ss_pred EecCC-cCHHHHHHhC---------CCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCcccc
Q 007541 106 FELME-SDLHQVIKAN---------DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARV 175 (599)
Q Consensus 106 ~E~~~-g~L~~~i~~~---------~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~ 175 (599)
|||+. ++|.+++... ..+++..++.++.||+.||+|||++||+|+||||+|||++.++.+||+|||.++.
T Consensus 75 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili~~~~~~~l~dfg~~~~ 154 (262)
T cd00192 75 LEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVGEDLVVKISDFGLSRD 154 (262)
T ss_pred EEeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEECCCCcEEEcccccccc
Confidence 99996 7999999875 6899999999999999999999999999999999999999999999999999987
Q ss_pred ccCCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHh-CCCCCCCCChhhHHHHHHHhcCCCCHHH
Q 007541 176 AFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLLGTPSPEA 254 (599)
Q Consensus 176 ~~~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLlt-G~~pF~g~~~~~~l~~I~~~lG~p~~e~ 254 (599)
...... ........++..|+|||.+.. ..++.++|||||||++++|++ |..||.+.+..+....+.+
T Consensus 155 ~~~~~~-~~~~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~--------- 222 (262)
T cd00192 155 VYDDDY-YRKKTGGKLPIRWMAPESLKD--GIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRK--------- 222 (262)
T ss_pred cccccc-cccccCCCcCccccCHHHhcc--CCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHc---------
Confidence 643221 111234467888999998876 578999999999999999999 6999987654443332221
Q ss_pred HHHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHH
Q 007541 255 IARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRL 334 (599)
Q Consensus 255 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dL 334 (599)
... .......++.+.++
T Consensus 223 ------------------------------------------------------------~~~---~~~~~~~~~~~~~l 239 (262)
T cd00192 223 ------------------------------------------------------------GYR---LPKPEYCPDELYEL 239 (262)
T ss_pred ------------------------------------------------------------CCC---CCCCccCChHHHHH
Confidence 000 01123457889999
Q ss_pred HHHhcccCCCCCCCHHHHhcC
Q 007541 335 LERMLAFEPKDRPTAEEALAD 355 (599)
Q Consensus 335 L~~mL~~DP~~RpTa~e~L~H 355 (599)
|.+||..||.+|||++|++++
T Consensus 240 i~~~l~~~p~~Rps~~~l~~~ 260 (262)
T cd00192 240 MLSCWQLDPEDRPTFSELVER 260 (262)
T ss_pred HHHHccCCcccCcCHHHHHHh
Confidence 999999999999999999975
No 282
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=6.1e-38 Score=315.35 Aligned_cols=245 Identities=23% Similarity=0.402 Sum_probs=192.9
Q ss_pred EEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEEEEEec
Q 007541 29 EVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVVFEL 108 (599)
Q Consensus 29 ~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~iylV~E~ 108 (599)
+.||+|+||.||+|.++.+++.||+|.+.... .......+.+|+.+|+.++||||+++++++.. ...+|+||||
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~~lv~e~ 74 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETL-PPDLKAKFLQEARILKQYSHPNIVRLIGVCTQ-----KQPIYIVMEL 74 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccC-CHHHHHHHHHHHHHHHhCCCCCcceEEEEEcC-----CCCeEEEEee
Confidence 36999999999999999999999999886432 22344678899999999999999999999843 3478999999
Q ss_pred CC-cCHHHHHHhCC-CCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCCCCCcccc
Q 007541 109 ME-SDLHQVIKAND-DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFW 186 (599)
Q Consensus 109 ~~-g~L~~~i~~~~-~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~~~~~~~ 186 (599)
+. ++|.+++...+ .+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++...+..... ..
T Consensus 75 ~~~~~L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~-~~ 153 (252)
T cd05084 75 VQGGDFLTFLRTEGPRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYAS-TG 153 (252)
T ss_pred ccCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEEcCCCcEEECccccCcccccccccc-cC
Confidence 98 59999987644 68999999999999999999999999999999999999999999999999997543221110 01
Q ss_pred cccccCccccCccccccccCCCCcchhhHhHHHHHHHHHh-CCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHhhhhhhh
Q 007541 187 TDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVCLLLNII 265 (599)
Q Consensus 187 t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLlt-G~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~~~~~~~ 265 (599)
.....+..|+|||.+.+ ..++.++|||||||++|+|++ |.+||...+.......+..
T Consensus 154 ~~~~~~~~y~aPE~~~~--~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~~~~-------------------- 211 (252)
T cd05084 154 GMKQIPVKWTAPEALNY--GRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIEQ-------------------- 211 (252)
T ss_pred CCCCCceeecCchhhcC--CCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHHHHc--------------------
Confidence 11123456999999876 578999999999999999997 8888865443221111110
Q ss_pred hcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCC
Q 007541 266 WCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKD 345 (599)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL~~DP~~ 345 (599)
..+.. .....+..+.+|+.+||+.||.+
T Consensus 212 -------------------------------------------------~~~~~---~~~~~~~~~~~li~~~l~~~p~~ 239 (252)
T cd05084 212 -------------------------------------------------GVRLP---CPELCPDAVYRLMERCWEYDPGQ 239 (252)
T ss_pred -------------------------------------------------CCCCC---CcccCCHHHHHHHHHHcCCChhh
Confidence 00011 11235778999999999999999
Q ss_pred CCCHHHHhc
Q 007541 346 RPTAEEALA 354 (599)
Q Consensus 346 RpTa~e~L~ 354 (599)
|||+.++++
T Consensus 240 Rps~~~~~~ 248 (252)
T cd05084 240 RPSFSTVHQ 248 (252)
T ss_pred CcCHHHHHH
Confidence 999999975
No 283
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=6.3e-38 Score=324.19 Aligned_cols=249 Identities=24% Similarity=0.380 Sum_probs=197.9
Q ss_pred CceEEEEEEeecCceEEEEEEECCCCc--EEEEEEecCcccChhhHHHHHHHHHHHHhc-CCCCccccceeecCCCcCCC
Q 007541 23 SRYKIEEVIGKGSYGVVCSAYDTRTGE--KVAIKKINDIFEHVSDATRILREIKLLRLL-RHPDIVEIKHILLPPSRREF 99 (599)
Q Consensus 23 ~rY~i~~~LG~G~~g~V~~a~d~~tg~--~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l-~HpnIv~l~~v~~~~s~~~~ 99 (599)
++|++.++||+|+||.||+|.++.++. .+++|.++. .........+.+|+.++.++ +||||+++++++.. .
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~-~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~-----~ 75 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKE-FASENDHRDFAGELEVLCKLGHHPNIINLLGACEN-----R 75 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccc-cCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEcc-----C
Confidence 579999999999999999999988775 478888763 22334456788999999999 69999999998843 3
Q ss_pred ccEEEEEecCC-cCHHHHHHhCC----------------CCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCC
Q 007541 100 KDIYVVFELME-SDLHQVIKAND----------------DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANAD 162 (599)
Q Consensus 100 ~~iylV~E~~~-g~L~~~i~~~~----------------~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~ 162 (599)
..+|+|+||+. ++|.+++.... .+++..++.++.||+.||+|||++||+||||||+|||++.+
T Consensus 76 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill~~~ 155 (297)
T cd05089 76 GYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLVGEN 155 (297)
T ss_pred CcceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcceEEECCC
Confidence 46899999998 69999997532 47889999999999999999999999999999999999999
Q ss_pred CceeeeccCccccccCCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHh-CCCCCCCCChhhHHH
Q 007541 163 CKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLD 241 (599)
Q Consensus 163 ~~lKL~DFGlA~~~~~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLlt-G~~pF~g~~~~~~l~ 241 (599)
+.+||+|||++........ ......+..|+|||.+.+ ..++.++|||||||++++|++ |..||.+.+..+...
T Consensus 156 ~~~kl~dfg~~~~~~~~~~----~~~~~~~~~y~aPE~~~~--~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~~~ 229 (297)
T cd05089 156 LASKIADFGLSRGEEVYVK----KTMGRLPVRWMAIESLNY--SVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELYE 229 (297)
T ss_pred CeEEECCcCCCccccceec----cCCCCcCccccCchhhcc--CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Confidence 9999999999864321111 111223456999999876 678999999999999999997 999998766544332
Q ss_pred HHHHhcCCCCHHHHHHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCC
Q 007541 242 IMTDLLGTPSPEAIARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFS 321 (599)
Q Consensus 242 ~I~~~lG~p~~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (599)
.+.... . .
T Consensus 230 ~~~~~~---------------------------------------------------------------------~---~ 237 (297)
T cd05089 230 KLPQGY---------------------------------------------------------------------R---M 237 (297)
T ss_pred HHhcCC---------------------------------------------------------------------C---C
Confidence 221100 0 0
Q ss_pred CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 007541 322 QKFPNANPLALRLLERMLAFEPKDRPTAEEALAD 355 (599)
Q Consensus 322 ~~~~~~s~~a~dLL~~mL~~DP~~RpTa~e~L~H 355 (599)
.....+++.+.+||.+||+.||.+|||++++++.
T Consensus 238 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~ 271 (297)
T cd05089 238 EKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQ 271 (297)
T ss_pred CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 1113467889999999999999999999999864
No 284
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=1.3e-37 Score=314.95 Aligned_cols=248 Identities=25% Similarity=0.394 Sum_probs=199.5
Q ss_pred CCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCcc
Q 007541 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKD 101 (599)
Q Consensus 22 ~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~ 101 (599)
.++|++.+.||+|++|.||+|.+. +++.||||.++... .....+.+|+.+++.++|+||+++++++.. ...
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~-~~~~v~iK~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~ 75 (261)
T cd05068 5 RTSIQLLRKLGAGQFGEVWEGLWN-NTTPVAVKTLKPGT---MDPKDFLAEAQIMKKLRHPKLIQLYAVCTL-----EEP 75 (261)
T ss_pred hhheeeEEEecccCCccEEEEEec-CCeEEEEEeeCCCc---ccHHHHHHHHHHHHHCCCCCccceeEEEec-----CCC
Confidence 467999999999999999999875 45789999986432 234567899999999999999999998743 347
Q ss_pred EEEEEecCC-cCHHHHHHhCC--CCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccC
Q 007541 102 IYVVFELME-SDLHQVIKAND--DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFN 178 (599)
Q Consensus 102 iylV~E~~~-g~L~~~i~~~~--~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~ 178 (599)
+|+||||+. ++|.+++.... .+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++....
T Consensus 76 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~ 155 (261)
T cd05068 76 IYIVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVGENNICKVADFGLARVIKE 155 (261)
T ss_pred eeeeeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEEcCCCCEEECCcceEEEccC
Confidence 899999995 79999997654 689999999999999999999999999999999999999999999999999987642
Q ss_pred CCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHh-CCCCCCCCChhhHHHHHHHhcCCCCHHHHHH
Q 007541 179 DTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLLGTPSPEAIAR 257 (599)
Q Consensus 179 ~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLlt-G~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~ 257 (599)
..... ......+..|+|||.+.+ ..++.++|||||||++++|++ |+.||.+.+....+..+....
T Consensus 156 ~~~~~--~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~---------- 221 (261)
T cd05068 156 DIYEA--REGAKFPIKWTAPEAALY--NRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQVDQGY---------- 221 (261)
T ss_pred Ccccc--cCCCcCceeccCcccccc--CCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCC----------
Confidence 21111 112223457999999876 678999999999999999999 999998766544333322100
Q ss_pred HhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHH
Q 007541 258 VCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLER 337 (599)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~ 337 (599)
.. ......+..+.+|+.+
T Consensus 222 -----------------------------------------------------------~~---~~~~~~~~~~~~li~~ 239 (261)
T cd05068 222 -----------------------------------------------------------RM---PCPPGCPKELYDIMLD 239 (261)
T ss_pred -----------------------------------------------------------CC---CCCCcCCHHHHHHHHH
Confidence 00 0112456789999999
Q ss_pred hcccCCCCCCCHHHHhc
Q 007541 338 MLAFEPKDRPTAEEALA 354 (599)
Q Consensus 338 mL~~DP~~RpTa~e~L~ 354 (599)
||+.||.+||++.++++
T Consensus 240 ~l~~~P~~Rp~~~~l~~ 256 (261)
T cd05068 240 CWKEDPDDRPTFETLQW 256 (261)
T ss_pred HhhcCcccCCCHHHHHH
Confidence 99999999999999975
No 285
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=4.7e-38 Score=325.11 Aligned_cols=257 Identities=28% Similarity=0.521 Sum_probs=208.1
Q ss_pred CceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccE
Q 007541 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDI 102 (599)
Q Consensus 23 ~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~i 102 (599)
..|.-..+||+|+||.||++.+..+|+.||||++... .......+.+|+.+++.++|+||+++++.+.. ..+.
T Consensus 20 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-----~~~~ 92 (292)
T cd06657 20 TYLDNFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLR--KQQRRELLFNEVVIMRDYQHENVVEMYNSYLV-----GDEL 92 (292)
T ss_pred HHhhhHHHcCCCCCeEEEEEEEcCCCeEEEEEEeccc--chhHHHHHHHHHHHHHhcCCcchhheeeEEEe-----CCEE
Confidence 3444457899999999999999999999999998532 22345668899999999999999999999843 3579
Q ss_pred EEEEecCCc-CHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCCCC
Q 007541 103 YVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTP 181 (599)
Q Consensus 103 ylV~E~~~g-~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~~ 181 (599)
|+||||+++ +|.+++.. +.+++..++.++.||+.||+|||+.||+|+||+|+||+++.++.++|+|||++........
T Consensus 93 ~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~ 171 (292)
T cd06657 93 WVVMEFLEGGALTDIVTH-TRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP 171 (292)
T ss_pred EEEEecCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEcccccceecccccc
Confidence 999999985 78887654 4689999999999999999999999999999999999999999999999999875533221
Q ss_pred CcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHhhh
Q 007541 182 TAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVCLL 261 (599)
Q Consensus 182 ~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~~~ 261 (599)
. .....++..|+|||.+.. ..++.++|+||+||++++|++|..||.+.+....+..+...+
T Consensus 172 ~---~~~~~~~~~y~~pE~~~~--~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~~~~~~-------------- 232 (292)
T cd06657 172 R---RKSLVGTPYWMAPELISR--LPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNL-------------- 232 (292)
T ss_pred c---ccccccCccccCHHHhcC--CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhC--------------
Confidence 1 234568899999998876 578899999999999999999999998766544332221100
Q ss_pred hhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHhccc
Q 007541 262 LNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAF 341 (599)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL~~ 341 (599)
+..+ ......++.+.+||.+||+.
T Consensus 233 -------------------------------------------------------~~~~-~~~~~~~~~l~~li~~~l~~ 256 (292)
T cd06657 233 -------------------------------------------------------PPKL-KNLHKVSPSLKGFLDRLLVR 256 (292)
T ss_pred -------------------------------------------------------Cccc-CCcccCCHHHHHHHHHHHhC
Confidence 0001 11234677899999999999
Q ss_pred CCCCCCCHHHHhcCccccCcc
Q 007541 342 EPKDRPTAEEALADPYFKGLA 362 (599)
Q Consensus 342 DP~~RpTa~e~L~HP~f~~~~ 362 (599)
||.+|||+.++|+||||....
T Consensus 257 ~P~~R~~~~~ll~~~~~~~~~ 277 (292)
T cd06657 257 DPAQRATAAELLKHPFLAKAG 277 (292)
T ss_pred CcccCcCHHHHhcChHHhccC
Confidence 999999999999999999775
No 286
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-39 Score=334.60 Aligned_cols=261 Identities=28% Similarity=0.438 Sum_probs=215.3
Q ss_pred CCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCccc-ChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCc
Q 007541 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFE-HVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFK 100 (599)
Q Consensus 22 ~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~-~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~ 100 (599)
-+.|.+-++||+|+||.||-|+.+.||+.+|.|++.+... ........++|-.+|.+++.+.||.|--.|.++ .
T Consensus 184 ~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTk-----d 258 (591)
T KOG0986|consen 184 KNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETK-----D 258 (591)
T ss_pred ccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCC-----C
Confidence 4678888999999999999999999999999999864322 223344567899999999999999999888544 5
Q ss_pred cEEEEEecCC-cCHHHHHHhCC--CCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCcccccc
Q 007541 101 DIYVVFELME-SDLHQVIKAND--DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAF 177 (599)
Q Consensus 101 ~iylV~E~~~-g~L~~~i~~~~--~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~ 177 (599)
.+|+|+..|+ |||+-.|...+ .+++..+.++..+|+.||.+||+.+||.|||||+|||+|+.|+++|+|+|||.-..
T Consensus 259 ~LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILLDd~GhvRISDLGLAvei~ 338 (591)
T KOG0986|consen 259 ALCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILLDDHGHVRISDLGLAVEIP 338 (591)
T ss_pred ceEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheeeccCCCeEeeccceEEecC
Confidence 7999999999 69998887765 89999999999999999999999999999999999999999999999999998654
Q ss_pred CCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHH
Q 007541 178 NDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIAR 257 (599)
Q Consensus 178 ~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~ 257 (599)
... ..+..+||..|||||++.. ..|+...|-|||||++|||+.|+.||.......-
T Consensus 339 ~g~----~~~~rvGT~GYMAPEvl~n--e~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk------------------ 394 (591)
T KOG0986|consen 339 EGK----PIRGRVGTVGYMAPEVLQN--EVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVK------------------ 394 (591)
T ss_pred CCC----ccccccCcccccCHHHHcC--CcccCCccHHHHHhHHHHHHcccCchhhhhhhhh------------------
Confidence 433 3456799999999999987 5799999999999999999999999975432111
Q ss_pred HhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHH
Q 007541 258 VCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLER 337 (599)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~ 337 (599)
.+.+.+ +....+..++ ..+|+++++|.+.
T Consensus 395 --------------------------------------------~eEvdr----r~~~~~~ey~---~kFS~eakslc~~ 423 (591)
T KOG0986|consen 395 --------------------------------------------REEVDR----RTLEDPEEYS---DKFSEEAKSLCEG 423 (591)
T ss_pred --------------------------------------------HHHHHH----HHhcchhhcc---cccCHHHHHHHHH
Confidence 111111 1111122222 4579999999999
Q ss_pred hcccCCCCCC-----CHHHHhcCccccCcc
Q 007541 338 MLAFEPKDRP-----TAEEALADPYFKGLA 362 (599)
Q Consensus 338 mL~~DP~~Rp-----Ta~e~L~HP~f~~~~ 362 (599)
+|+.||.+|. .++++-+||||+++.
T Consensus 424 LL~Kdp~~RLGcrg~ga~evk~HpfFk~ln 453 (591)
T KOG0986|consen 424 LLTKDPEKRLGCRGEGAQEVKEHPFFKDLN 453 (591)
T ss_pred HHccCHHHhccCCCcCcchhhhCcccccCC
Confidence 9999999997 588999999999863
No 287
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=8.4e-38 Score=321.59 Aligned_cols=251 Identities=24% Similarity=0.344 Sum_probs=200.7
Q ss_pred CCceEEEEEEeecCceEEEEEEEC-----CCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCc
Q 007541 22 GSRYKIEEVIGKGSYGVVCSAYDT-----RTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSR 96 (599)
Q Consensus 22 ~~rY~i~~~LG~G~~g~V~~a~d~-----~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~ 96 (599)
...|.+.+.||+|+||+||++.+. .++..||+|.+... .......+.+|+.+|+.++|+||+++++++..
T Consensus 4 ~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--- 78 (288)
T cd05093 4 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA--SDNARKDFHREAELLTNLQHEHIVKFYGVCVE--- 78 (288)
T ss_pred hHHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCc--CHHHHHHHHHHHHHHHhCCCCCcceEEEEEec---
Confidence 467999999999999999999863 34567999988642 22345578899999999999999999999853
Q ss_pred CCCccEEEEEecCC-cCHHHHHHhCC-------------CCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCC
Q 007541 97 REFKDIYVVFELME-SDLHQVIKAND-------------DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANAD 162 (599)
Q Consensus 97 ~~~~~iylV~E~~~-g~L~~~i~~~~-------------~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~ 162 (599)
...+|+||||+. ++|.+++...+ .+++..+..++.||+.||+|||++||+||||||+|||++.+
T Consensus 79 --~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~~~ 156 (288)
T cd05093 79 --GDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGEN 156 (288)
T ss_pred --CCccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccC
Confidence 347899999998 69999997543 48999999999999999999999999999999999999999
Q ss_pred CceeeeccCccccccCCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHh-CCCCCCCCChhhHHH
Q 007541 163 CKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLD 241 (599)
Q Consensus 163 ~~lKL~DFGlA~~~~~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLlt-G~~pF~g~~~~~~l~ 241 (599)
+.+||+|||+++....... ........++..|+|||.+.+ ..++.++|||||||++++|++ |.+||.+.+..+.+.
T Consensus 157 ~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~--~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~~~~ 233 (288)
T cd05093 157 LLVKIGDFGMSRDVYSTDY-YRVGGHTMLPIRWMPPESIMY--RKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIE 233 (288)
T ss_pred CcEEeccCCccccccCCce-eecCCCCCccccccCHHHhcc--CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHH
Confidence 9999999999976532211 111223445778999999876 678999999999999999998 999997766444333
Q ss_pred HHHHhcCCCCHHHHHHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCC
Q 007541 242 IMTDLLGTPSPEAIARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFS 321 (599)
Q Consensus 242 ~I~~~lG~p~~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (599)
.+... .. .
T Consensus 234 ~i~~~---------------------------------------------------------------------~~---~ 241 (288)
T cd05093 234 CITQG---------------------------------------------------------------------RV---L 241 (288)
T ss_pred HHHcC---------------------------------------------------------------------Cc---C
Confidence 32210 00 0
Q ss_pred CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 007541 322 QKFPNANPLALRLLERMLAFEPKDRPTAEEALA 354 (599)
Q Consensus 322 ~~~~~~s~~a~dLL~~mL~~DP~~RpTa~e~L~ 354 (599)
......++.+.+||.+||+.||.+|||+.|++.
T Consensus 242 ~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~ 274 (288)
T cd05093 242 QRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHS 274 (288)
T ss_pred CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 111245678999999999999999999999965
No 288
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=9.4e-38 Score=316.85 Aligned_cols=247 Identities=28% Similarity=0.411 Sum_probs=197.9
Q ss_pred CCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCcc
Q 007541 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKD 101 (599)
Q Consensus 22 ~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~ 101 (599)
.++|++.++||+|+||+||+|.+..++ .||||+++... .....+.+|+.+++.++|+||+++++.+.. ..
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~-~valK~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~------~~ 74 (262)
T cd05071 5 RESLRLEVKLGQGCFGEVWMGTWNGTT-RVAIKTLKPGT---MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE------EP 74 (262)
T ss_pred hHHeeEeeecCCCCCCcEEEEEecCCc-eEEEEecccCc---cCHHHHHHHHHHHHhCCCCCcceEEEEECC------CC
Confidence 478999999999999999999887664 59999987422 223567899999999999999999887632 35
Q ss_pred EEEEEecCC-cCHHHHHHhC--CCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccC
Q 007541 102 IYVVFELME-SDLHQVIKAN--DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFN 178 (599)
Q Consensus 102 iylV~E~~~-g~L~~~i~~~--~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~ 178 (599)
.|+||||+. ++|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++....
T Consensus 75 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~ 154 (262)
T cd05071 75 IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIED 154 (262)
T ss_pred cEEEEEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEEcCCCcEEeccCCceeeccc
Confidence 799999999 5999999763 3589999999999999999999999999999999999999999999999999976532
Q ss_pred CCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHh-CCCCCCCCChhhHHHHHHHhcCCCCHHHHHH
Q 007541 179 DTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLLGTPSPEAIAR 257 (599)
Q Consensus 179 ~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLlt-G~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~ 257 (599)
..... .....++..|+|||.+.. ..++.++|||||||++|+|++ |.+||.+......+..+....
T Consensus 155 ~~~~~--~~~~~~~~~y~~PE~~~~--~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~---------- 220 (262)
T cd05071 155 NEYTA--RQGAKFPIKWTAPEAALY--GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY---------- 220 (262)
T ss_pred ccccc--ccCCcccceecCHhHhcc--CCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHhcCC----------
Confidence 22111 123346678999998866 678999999999999999999 888998765443332221100
Q ss_pred HhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHH
Q 007541 258 VCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLER 337 (599)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~ 337 (599)
..+ .....+..+.+||.+
T Consensus 221 -----------------------------------------------------------~~~---~~~~~~~~l~~li~~ 238 (262)
T cd05071 221 -----------------------------------------------------------RMP---CPPECPESLHDLMCQ 238 (262)
T ss_pred -----------------------------------------------------------CCC---CccccCHHHHHHHHH
Confidence 000 113467789999999
Q ss_pred hcccCCCCCCCHHHHhc
Q 007541 338 MLAFEPKDRPTAEEALA 354 (599)
Q Consensus 338 mL~~DP~~RpTa~e~L~ 354 (599)
||+.||.+|||+.++++
T Consensus 239 ~l~~~p~~Rp~~~~~~~ 255 (262)
T cd05071 239 CWRKEPEERPTFEYLQA 255 (262)
T ss_pred HccCCcccCCCHHHHHH
Confidence 99999999999999876
No 289
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7e-39 Score=344.61 Aligned_cols=243 Identities=30% Similarity=0.483 Sum_probs=200.4
Q ss_pred CCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhc-CCCCccccceeecCCCcCCCc
Q 007541 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLL-RHPDIVEIKHILLPPSRREFK 100 (599)
Q Consensus 22 ~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l-~HpnIv~l~~v~~~~s~~~~~ 100 (599)
.+.|.+...+|.|+|++|..+.+..+++..++|+|.+... ...+|+.++... +||||+++++++ .+..
T Consensus 321 ~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~~------~~~~e~~~~~~~~~h~niv~~~~v~-----~~~~ 389 (612)
T KOG0603|consen 321 TESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRAD------DNQDEIPISLLVRDHPNIVKSHDVY-----EDGK 389 (612)
T ss_pred chhhccccccCCCCccceeeeeccccccchhheecccccc------ccccccchhhhhcCCCcceeeccee-----cCCc
Confidence 5778899999999999999999999999999999976411 123677665555 699999999999 4556
Q ss_pred cEEEEEecCCc-CHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEe-CCCCceeeeccCccccccC
Q 007541 101 DIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILA-NADCKLKICDFGLARVAFN 178 (599)
Q Consensus 101 ~iylV~E~~~g-~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv-~~~~~lKL~DFGlA~~~~~ 178 (599)
++|+|||++.| .|.+.|....... ..+..|++||+.||.|||++|||||||||+|||+ +..++|+|||||.++....
T Consensus 390 ~~~~v~e~l~g~ell~ri~~~~~~~-~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~ 468 (612)
T KOG0603|consen 390 EIYLVMELLDGGELLRRIRSKPEFC-SEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELER 468 (612)
T ss_pred eeeeeehhccccHHHHHHHhcchhH-HHHHHHHHHHHHHHHHHHhcCeeecCCChhheeecCCCCcEEEEEechhhhCch
Confidence 89999999995 6777776665444 7888999999999999999999999999999999 6889999999999986543
Q ss_pred CCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHH
Q 007541 179 DTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARV 258 (599)
Q Consensus 179 ~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~ 258 (599)
+ +-..+-|..|.|||++.. ..|+.++||||||++||+||+|+.||...... ..|...++.+
T Consensus 469 ~------~~tp~~t~~y~APEvl~~--~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~---~ei~~~i~~~-------- 529 (612)
T KOG0603|consen 469 S------CDTPALTLQYVAPEVLAI--QEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG---IEIHTRIQMP-------- 529 (612)
T ss_pred h------hcccchhhcccChhhhcc--CCCCcchhhHHHHHHHHHHHhCCCccccCCch---HHHHHhhcCC--------
Confidence 3 223467889999999986 79999999999999999999999999754332 1122111211
Q ss_pred hhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHh
Q 007541 259 CLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERM 338 (599)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~m 338 (599)
+++ ..+|+.|+|||++|
T Consensus 530 ------------------------------------------------------------~~s---~~vS~~AKdLl~~L 546 (612)
T KOG0603|consen 530 ------------------------------------------------------------KFS---ECVSDEAKDLLQQL 546 (612)
T ss_pred ------------------------------------------------------------ccc---cccCHHHHHHHHHh
Confidence 111 36789999999999
Q ss_pred cccCCCCCCCHHHHhcCccc
Q 007541 339 LAFEPKDRPTAEEALADPYF 358 (599)
Q Consensus 339 L~~DP~~RpTa~e~L~HP~f 358 (599)
|++||.+|+++.+++.||||
T Consensus 547 L~~dP~~Rl~~~~i~~h~w~ 566 (612)
T KOG0603|consen 547 LQVDPALRLGADEIGAHPWF 566 (612)
T ss_pred ccCChhhCcChhhhccCcch
Confidence 99999999999999999999
No 290
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=1.5e-37 Score=315.28 Aligned_cols=253 Identities=25% Similarity=0.387 Sum_probs=201.3
Q ss_pred CCceEEEEEEeecCceEEEEEEECCC---CcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCC
Q 007541 22 GSRYKIEEVIGKGSYGVVCSAYDTRT---GEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRRE 98 (599)
Q Consensus 22 ~~rY~i~~~LG~G~~g~V~~a~d~~t---g~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~ 98 (599)
.++|++.+.||+|+||+||+|.++.+ ...||||+++... .......+.+|+.+|+.++|+||+++++.+..
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~----- 76 (266)
T cd05033 3 PSYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGS-SDKQRLDFLTEASIMGQFDHPNIIRLEGVVTK----- 76 (266)
T ss_pred hHHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCC-ChHHHHHHHHHHHHHHhCCCCCcceEeEEEec-----
Confidence 46799999999999999999998755 4589999886533 22344567899999999999999999998843
Q ss_pred CccEEEEEecCC-cCHHHHHHhC-CCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccc
Q 007541 99 FKDIYVVFELME-SDLHQVIKAN-DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVA 176 (599)
Q Consensus 99 ~~~iylV~E~~~-g~L~~~i~~~-~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~ 176 (599)
...+|+||||+. ++|.+++... +.+++..+..++.||+.||.|||++||+|+||||+|||++.++.+||+|||+++..
T Consensus 77 ~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~ 156 (266)
T cd05033 77 SRPVMIITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRRL 156 (266)
T ss_pred CCceEEEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCCEEECccchhhcc
Confidence 346899999998 5999998764 47899999999999999999999999999999999999999999999999999876
Q ss_pred cCCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHh-CCCCCCCCChhhHHHHHHHhcCCCCHHHH
Q 007541 177 FNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLLGTPSPEAI 255 (599)
Q Consensus 177 ~~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLlt-G~~pF~g~~~~~~l~~I~~~lG~p~~e~i 255 (599)
....... ......++..|+|||.+.. ..++.++|||||||++++|++ |..||......+....+....
T Consensus 157 ~~~~~~~-~~~~~~~~~~y~~Pe~~~~--~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~-------- 225 (266)
T cd05033 157 EDSEATY-TTKGGKIPIRWTAPEAIAY--RKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAVEDGY-------- 225 (266)
T ss_pred cccccce-eccCCCCCccccChhhhcc--CCCccccchHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHcCC--------
Confidence 4211111 1112234678999999876 678999999999999999998 999986655433322221100
Q ss_pred HHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHH
Q 007541 256 ARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLL 335 (599)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL 335 (599)
..+ .....++.+.+|+
T Consensus 226 -------------------------------------------------------------~~~---~~~~~~~~l~~li 241 (266)
T cd05033 226 -------------------------------------------------------------RLP---PPMDCPSALYQLM 241 (266)
T ss_pred -------------------------------------------------------------CCC---CCCCCCHHHHHHH
Confidence 000 1124577899999
Q ss_pred HHhcccCCCCCCCHHHHhcC
Q 007541 336 ERMLAFEPKDRPTAEEALAD 355 (599)
Q Consensus 336 ~~mL~~DP~~RpTa~e~L~H 355 (599)
.+||+.||.+|||+.|++++
T Consensus 242 ~~cl~~~p~~Rp~~~ei~~~ 261 (266)
T cd05033 242 LDCWQKDRNERPTFSQIVST 261 (266)
T ss_pred HHHcCCCcccCcCHHHHHHH
Confidence 99999999999999999875
No 291
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=7.9e-38 Score=321.84 Aligned_cols=253 Identities=26% Similarity=0.440 Sum_probs=200.7
Q ss_pred CCceEEEEEEeecCceEEEEEEECCCC-----cEEEEEEecCcccChhhHHHHHHHHHHHHhc-CCCCccccceeecCCC
Q 007541 22 GSRYKIEEVIGKGSYGVVCSAYDTRTG-----EKVAIKKINDIFEHVSDATRILREIKLLRLL-RHPDIVEIKHILLPPS 95 (599)
Q Consensus 22 ~~rY~i~~~LG~G~~g~V~~a~d~~tg-----~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l-~HpnIv~l~~v~~~~s 95 (599)
.++|++.+.||+|+||.||++.++..+ ..||+|.+..... ......+.+|+.+++.+ +|+||+++++++..
T Consensus 11 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~-- 87 (293)
T cd05053 11 RDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDAT-EKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQ-- 87 (293)
T ss_pred HhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCC-HHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcC--
Confidence 478999999999999999999987543 7899999875322 23446688999999999 79999999999843
Q ss_pred cCCCccEEEEEecCC-cCHHHHHHh----------------CCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEE
Q 007541 96 RREFKDIYVVFELME-SDLHQVIKA----------------NDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNIL 158 (599)
Q Consensus 96 ~~~~~~iylV~E~~~-g~L~~~i~~----------------~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NIL 158 (599)
...+|+||||+. ++|.+++.. ...+++..+..++.||+.||.|||+.||+||||||+|||
T Consensus 88 ---~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~Nil 164 (293)
T cd05053 88 ---EGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAARNVL 164 (293)
T ss_pred ---CCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCccccccceeeEE
Confidence 346899999998 699999864 236889999999999999999999999999999999999
Q ss_pred eCCCCceeeeccCccccccCCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHh-CCCCCCCCChh
Q 007541 159 ANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVV 237 (599)
Q Consensus 159 v~~~~~lKL~DFGlA~~~~~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLlt-G~~pF~g~~~~ 237 (599)
++.++.+||+|||+++......... ......++..|+|||++.+ ..++.++||||+|||+|+|++ |..||.+....
T Consensus 165 ~~~~~~~kL~Dfg~~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~ 241 (293)
T cd05053 165 VTEDHVMKIADFGLARDIHHIDYYR-KTTNGRLPVKWMAPEALFD--RVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVE 241 (293)
T ss_pred EcCCCeEEeCcccccccccccccee-ccCCCCCCccccCHHHhcc--CCcCcccceeehhhHHHHHhcCCCCCCCCCCHH
Confidence 9999999999999998654322111 1122234567999998876 678999999999999999997 99999876644
Q ss_pred hHHHHHHHhcCCCCHHHHHHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCC
Q 007541 238 HQLDIMTDLLGTPSPEAIARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKP 317 (599)
Q Consensus 238 ~~l~~I~~~lG~p~~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (599)
+....+... ..
T Consensus 242 ~~~~~~~~~---------------------------------------------------------------------~~ 252 (293)
T cd05053 242 ELFKLLKEG---------------------------------------------------------------------YR 252 (293)
T ss_pred HHHHHHHcC---------------------------------------------------------------------Cc
Confidence 333222100 00
Q ss_pred CCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 007541 318 IPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALAD 355 (599)
Q Consensus 318 ~~~~~~~~~~s~~a~dLL~~mL~~DP~~RpTa~e~L~H 355 (599)
.......+..+.+||.+||..||++|||+.|+|++
T Consensus 253 ---~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~ 287 (293)
T cd05053 253 ---MEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVED 287 (293)
T ss_pred ---CCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence 01112457789999999999999999999999975
No 292
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00 E-value=1.2e-37 Score=321.66 Aligned_cols=262 Identities=24% Similarity=0.393 Sum_probs=205.5
Q ss_pred CCCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcC-CCCccccceeecCCCcCCC
Q 007541 21 EGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLR-HPDIVEIKHILLPPSRREF 99 (599)
Q Consensus 21 ~~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~-HpnIv~l~~v~~~~s~~~~ 99 (599)
..+.|++.+.||+|++|.||+|.+..+++.||||.++.... ......+.+|+.++..+. |+||+++++++.. .
T Consensus 13 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~-~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~-----~ 86 (296)
T cd06618 13 DLNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGN-KEENKRILMDLDVVLKSHDCPYIVKCYGYFIT-----D 86 (296)
T ss_pred CcchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCC-hHHHHHHHHHHHHHHhccCCCchHhhheeeec-----C
Confidence 34779999999999999999999999999999999875322 223456777888776665 9999999999844 3
Q ss_pred ccEEEEEecCCcCHHHHHHh-CCCCCHHHHHHHHHHHHhhhhhccc-CceEeecCCCCcEEeCCCCceeeeccCcccccc
Q 007541 100 KDIYVVFELMESDLHQVIKA-NDDLTPEHYQFFLYQLLRGLKYIHT-ANVFHRDLKPKNILANADCKLKICDFGLARVAF 177 (599)
Q Consensus 100 ~~iylV~E~~~g~L~~~i~~-~~~lse~~i~~i~~QLl~aL~yLHs-~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~ 177 (599)
..+|+||||+.++|.+++.. ...+++..+..++.||+.||.|||+ .||+||||+|+|||++.++.+||+|||++....
T Consensus 87 ~~~~~v~e~~~~~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~ 166 (296)
T cd06618 87 SDVFICMELMSTCLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDASGNVKLCDFGISGRLV 166 (296)
T ss_pred CeEEEEeeccCcCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEcCCCCEEECccccchhcc
Confidence 47999999999988888765 4578999999999999999999997 599999999999999999999999999997653
Q ss_pred CCCCCcccccccccCccccCcccccccc--CCCCcchhhHhHHHHHHHHHhCCCCCCCCCh-hhHHHHHHHhcCCCCHHH
Q 007541 178 NDTPTAIFWTDYVATRWYRAPELCGSFF--SKYTPAIDIWSIGCIFAELLTGKPLFPGKNV-VHQLDIMTDLLGTPSPEA 254 (599)
Q Consensus 178 ~~~~~~~~~t~~~gt~~Y~APE~l~~~~--~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~-~~~l~~I~~~lG~p~~e~ 254 (599)
.... .....++..|+|||.+.+.. ..++.++|||||||++++|++|+.||..... .+.+..+..
T Consensus 167 ~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~--------- 233 (296)
T cd06618 167 DSKA----KTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTKILQ--------- 233 (296)
T ss_pred CCCc----ccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHHHHHHhc---------
Confidence 2221 12335778899999986521 3478899999999999999999999965322 111111110
Q ss_pred HHHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHH
Q 007541 255 IARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRL 334 (599)
Q Consensus 255 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dL 334 (599)
.. ...+ ......+..+.+|
T Consensus 234 -----------------------------------------------------------~~-~~~~-~~~~~~~~~l~~l 252 (296)
T cd06618 234 -----------------------------------------------------------EE-PPSL-PPNEGFSPDFCSF 252 (296)
T ss_pred -----------------------------------------------------------CC-CCCC-CCCCCCCHHHHHH
Confidence 00 0000 0011357789999
Q ss_pred HHHhcccCCCCCCCHHHHhcCccccCcc
Q 007541 335 LERMLAFEPKDRPTAEEALADPYFKGLA 362 (599)
Q Consensus 335 L~~mL~~DP~~RpTa~e~L~HP~f~~~~ 362 (599)
|.+||..||.+|||++++++||||..+.
T Consensus 253 i~~~l~~~p~~Rp~~~~il~~~~~~~~~ 280 (296)
T cd06618 253 VDLCLTKDHRKRPKYRELLQHPFIRRYE 280 (296)
T ss_pred HHHHccCChhhCCCHHHHhcChhhhccc
Confidence 9999999999999999999999998654
No 293
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=6.5e-38 Score=325.39 Aligned_cols=250 Identities=24% Similarity=0.386 Sum_probs=196.5
Q ss_pred CCceEEEEEEeecCceEEEEEEECCCCcE--EEEEEecCcccChhhHHHHHHHHHHHHhc-CCCCccccceeecCCCcCC
Q 007541 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGEK--VAIKKINDIFEHVSDATRILREIKLLRLL-RHPDIVEIKHILLPPSRRE 98 (599)
Q Consensus 22 ~~rY~i~~~LG~G~~g~V~~a~d~~tg~~--vAIK~i~~~~~~~~~~~~i~rEi~iL~~l-~HpnIv~l~~v~~~~s~~~ 98 (599)
-+.|++.+.||+|+||+||+|.++.++.. +|+|.++.. ........+.+|+.++..+ +|+||+++++++..
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~-~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~----- 79 (303)
T cd05088 6 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY-ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEH----- 79 (303)
T ss_pred hhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEeccc-CCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECC-----
Confidence 35899999999999999999999888764 577776532 2233456788999999999 79999999999843
Q ss_pred CccEEEEEecCC-cCHHHHHHhCC----------------CCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCC
Q 007541 99 FKDIYVVFELME-SDLHQVIKAND----------------DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANA 161 (599)
Q Consensus 99 ~~~iylV~E~~~-g~L~~~i~~~~----------------~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~ 161 (599)
...+|+||||+. ++|.+++...+ .+++..++.++.||+.||+|||++||+||||||+|||++.
T Consensus 80 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili~~ 159 (303)
T cd05088 80 RGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGE 159 (303)
T ss_pred CCCceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEecC
Confidence 347999999998 69999997542 5789999999999999999999999999999999999999
Q ss_pred CCceeeeccCccccccCCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHh-CCCCCCCCChhhHH
Q 007541 162 DCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQL 240 (599)
Q Consensus 162 ~~~lKL~DFGlA~~~~~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLlt-G~~pF~g~~~~~~l 240 (599)
++.+||+|||+++....... ......+..|+|||.+.. ..++.++|||||||++++|++ |..||.+.+..+..
T Consensus 160 ~~~~kl~dfg~~~~~~~~~~----~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~ 233 (303)
T cd05088 160 NYVAKIADFGLSRGQEVYVK----KTMGRLPVRWMAIESLNY--SVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELY 233 (303)
T ss_pred CCcEEeCccccCcccchhhh----cccCCCcccccCHHHHhc--cCCcccccchhhhhHHHHHHhcCCCCcccCChHHHH
Confidence 99999999999864211110 011223567999998866 568899999999999999998 99999766543322
Q ss_pred HHHHHhcCCCCHHHHHHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCC
Q 007541 241 DIMTDLLGTPSPEAIARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPF 320 (599)
Q Consensus 241 ~~I~~~lG~p~~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (599)
..+.. ....
T Consensus 234 ~~~~~---------------------------------------------------------------------~~~~-- 242 (303)
T cd05088 234 EKLPQ---------------------------------------------------------------------GYRL-- 242 (303)
T ss_pred HHHhc---------------------------------------------------------------------CCcC--
Confidence 21110 0000
Q ss_pred CCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 007541 321 SQKFPNANPLALRLLERMLAFEPKDRPTAEEALAD 355 (599)
Q Consensus 321 ~~~~~~~s~~a~dLL~~mL~~DP~~RpTa~e~L~H 355 (599)
......++.+.+||.+||+.||.+|||++++|++
T Consensus 243 -~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 276 (303)
T cd05088 243 -EKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS 276 (303)
T ss_pred -CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 0112356789999999999999999999999986
No 294
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=2.1e-37 Score=313.25 Aligned_cols=203 Identities=31% Similarity=0.520 Sum_probs=173.5
Q ss_pred CceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcc-cChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCcc
Q 007541 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIF-EHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKD 101 (599)
Q Consensus 23 ~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~-~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~ 101 (599)
++|++.+.||+|+||.||+|.+..+|+.||+|.++... .......++.+|+.+++.++|+||+++++.+... ..
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~-----~~ 76 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIEN-----NE 76 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecC-----Ce
Confidence 58999999999999999999999999999999886422 2233456788999999999999999999998543 47
Q ss_pred EEEEEecCC-cCHHHHHHh----CCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccc
Q 007541 102 IYVVFELME-SDLHQVIKA----NDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVA 176 (599)
Q Consensus 102 iylV~E~~~-g~L~~~i~~----~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~ 176 (599)
.++||||+. ++|.+++.. ...+++..+..++.||+.||.|||+.||+||||||+||+++.++.++|+|||+++..
T Consensus 77 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~ 156 (267)
T cd08224 77 LNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFITATGVVKLGDLGLGRFF 156 (267)
T ss_pred EEEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEECCCCcEEEeccceeeec
Confidence 899999999 599998864 235899999999999999999999999999999999999999999999999998765
Q ss_pred cCCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCC
Q 007541 177 FNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKN 235 (599)
Q Consensus 177 ~~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~ 235 (599)
...... .....++..|+|||.+.+ ..++.++||||+||++++|++|+.||.+..
T Consensus 157 ~~~~~~---~~~~~~~~~y~apE~~~~--~~~~~~~Di~slG~il~~l~~g~~p~~~~~ 210 (267)
T cd08224 157 SSKTTA---AHSLVGTPYYMSPERIHE--NGYNFKSDIWSLGCLLYEMAALQSPFYGDK 210 (267)
T ss_pred cCCCcc---cceecCCccccCHHHhcc--CCCCchhcHHHHHHHHHHHHHCCCCcccCC
Confidence 332211 133467889999998876 678999999999999999999999986543
No 295
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=1.2e-37 Score=319.23 Aligned_cols=252 Identities=21% Similarity=0.373 Sum_probs=200.3
Q ss_pred CceEEEEEEeecCceEEEEEEEC----CCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCC
Q 007541 23 SRYKIEEVIGKGSYGVVCSAYDT----RTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRRE 98 (599)
Q Consensus 23 ~rY~i~~~LG~G~~g~V~~a~d~----~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~ 98 (599)
+.|++.+.||+|+||+||+|.+. .++..||+|.+.... .......+.+|+.+++.++||||+++++++...
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~---- 79 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDIN-NPQQWGEFQQEASLMAELHHPNIVCLLGVVTQE---- 79 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCC-CHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecC----
Confidence 57899999999999999999853 456889999987432 233446788999999999999999999998433
Q ss_pred CccEEEEEecCC-cCHHHHHHhC-----------------CCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeC
Q 007541 99 FKDIYVVFELME-SDLHQVIKAN-----------------DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILAN 160 (599)
Q Consensus 99 ~~~iylV~E~~~-g~L~~~i~~~-----------------~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~ 160 (599)
...|+||||+. ++|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||++
T Consensus 80 -~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili~ 158 (283)
T cd05090 80 -QPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILIG 158 (283)
T ss_pred -CceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhccccceEEEc
Confidence 46899999998 6999988532 2478889999999999999999999999999999999999
Q ss_pred CCCceeeeccCccccccCCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHh-CCCCCCCCChhhH
Q 007541 161 ADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQ 239 (599)
Q Consensus 161 ~~~~lKL~DFGlA~~~~~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLlt-G~~pF~g~~~~~~ 239 (599)
.++.+||+|||+++........ .......++..|+|||.+.+ ..++.++|+|||||++++|++ |.+||.+.+..+.
T Consensus 159 ~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~--~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~~ 235 (283)
T cd05090 159 EQLHVKISDLGLSREIYSADYY-RVQPKSLLPIRWMPPEAIMY--GKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEV 235 (283)
T ss_pred CCCcEEeccccccccccCCcce-ecccCCCccceecChHHhcc--CCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHH
Confidence 9999999999999865332211 11223345677999999876 578999999999999999998 9999987654333
Q ss_pred HHHHHHhcCCCCHHHHHHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCC
Q 007541 240 LDIMTDLLGTPSPEAIARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIP 319 (599)
Q Consensus 240 l~~I~~~lG~p~~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (599)
...+.. ...
T Consensus 236 ~~~~~~---------------------------------------------------------------------~~~-- 244 (283)
T cd05090 236 IEMVRK---------------------------------------------------------------------RQL-- 244 (283)
T ss_pred HHHHHc---------------------------------------------------------------------CCc--
Confidence 332211 000
Q ss_pred CCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 007541 320 FSQKFPNANPLALRLLERMLAFEPKDRPTAEEALAD 355 (599)
Q Consensus 320 ~~~~~~~~s~~a~dLL~~mL~~DP~~RpTa~e~L~H 355 (599)
.......++.+.+||.+||+.||.+||++.+++++
T Consensus 245 -~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~ 279 (283)
T cd05090 245 -LPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTR 279 (283)
T ss_pred -CCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence 01123467889999999999999999999999875
No 296
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=1.4e-37 Score=314.00 Aligned_cols=245 Identities=21% Similarity=0.322 Sum_probs=195.0
Q ss_pred EEEeecCceEEEEEEECCCC---cEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEEEE
Q 007541 29 EVIGKGSYGVVCSAYDTRTG---EKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVV 105 (599)
Q Consensus 29 ~~LG~G~~g~V~~a~d~~tg---~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~iylV 105 (599)
++||+|+||.||+|....++ ..||+|.+...... .....+.+|+.+|+.+.|+||+++++++.. ..+++|
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~------~~~~~v 73 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIA-AGKKEFLREASVMAQLDHPCIVRLIGVCKG------EPLMLV 73 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccch-HHHHHHHHHHHHHHhcCCCCeeeEEEEEcC------CceEEE
Confidence 46999999999999876655 78999998754332 345678899999999999999999998732 357999
Q ss_pred EecCC-cCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCCCCCcc
Q 007541 106 FELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAI 184 (599)
Q Consensus 106 ~E~~~-g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~~~~~ 184 (599)
|||+. ++|.+++..+..+++..+..++.||+.||.|||+.||+|+||||+|||++.++.+||+|||+++..........
T Consensus 74 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~ 153 (257)
T cd05060 74 MELAPLGPLLKYLKKRREIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYR 153 (257)
T ss_pred EEeCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEEcCCCcEEeccccccceeecCCcccc
Confidence 99998 69999998887899999999999999999999999999999999999999999999999999986543222111
Q ss_pred cccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHh-CCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHhhhhh
Q 007541 185 FWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVCLLLN 263 (599)
Q Consensus 185 ~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLlt-G~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~~~~~ 263 (599)
......++..|+|||.+.+ ..++.++|||||||++++|++ |.+||...+..+....+..
T Consensus 154 ~~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~~~~------------------ 213 (257)
T cd05060 154 ATTAGRWPLKWYAPECINY--GKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLES------------------ 213 (257)
T ss_pred cccCccccccccCHHHhcC--CCCCccchHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHc------------------
Confidence 0111123457999998876 678999999999999999997 9999976554332222110
Q ss_pred hhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHhcccCC
Q 007541 264 IIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEP 343 (599)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL~~DP 343 (599)
. .. .......+..+.+||.+||..||
T Consensus 214 ------------------------------------------------~---~~---~~~~~~~~~~l~~li~~cl~~~p 239 (257)
T cd05060 214 ------------------------------------------------G---ER---LPRPEECPQEIYSIMLSCWKYRP 239 (257)
T ss_pred ------------------------------------------------C---Cc---CCCCCCCCHHHHHHHHHHhcCCh
Confidence 0 00 01123467789999999999999
Q ss_pred CCCCCHHHHhc
Q 007541 344 KDRPTAEEALA 354 (599)
Q Consensus 344 ~~RpTa~e~L~ 354 (599)
++|||+.++++
T Consensus 240 ~~Rp~~~~l~~ 250 (257)
T cd05060 240 EDRPTFSELES 250 (257)
T ss_pred hhCcCHHHHHH
Confidence 99999999976
No 297
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=9.5e-38 Score=315.69 Aligned_cols=247 Identities=27% Similarity=0.387 Sum_probs=198.4
Q ss_pred CCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCcc
Q 007541 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKD 101 (599)
Q Consensus 22 ~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~ 101 (599)
.++|++++.||+|+||.||+|.+. ++..||+|++..... ....+.+|+.+|+.++|+||+++++++.. ..
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~-~~~~~~~k~~~~~~~---~~~~~~~E~~~l~~l~~~~i~~~~~~~~~------~~ 74 (260)
T cd05070 5 RESLQLIKKLGNGQFGEVWMGTWN-GNTKVAVKTLKPGTM---SPESFLEEAQIMKKLRHDKLVQLYAVVSE------EP 74 (260)
T ss_pred hHHhhhhheeccccCceEEEEEec-CCceeEEEEecCCCC---CHHHHHHHHHHHHhcCCCceEEEEeEECC------CC
Confidence 468999999999999999999865 566799999875322 23568899999999999999999988732 35
Q ss_pred EEEEEecCC-cCHHHHHHhC--CCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccC
Q 007541 102 IYVVFELME-SDLHQVIKAN--DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFN 178 (599)
Q Consensus 102 iylV~E~~~-g~L~~~i~~~--~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~ 178 (599)
+|+||||+. ++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.....
T Consensus 75 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~ 154 (260)
T cd05070 75 IYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGDGLVCKIADFGLARLIED 154 (260)
T ss_pred cEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEeCCceEEeCCceeeeeccC
Confidence 799999998 5999999763 3589999999999999999999999999999999999999999999999999976532
Q ss_pred CCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHh-CCCCCCCCChhhHHHHHHHhcCCCCHHHHHH
Q 007541 179 DTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLLGTPSPEAIAR 257 (599)
Q Consensus 179 ~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLlt-G~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~ 257 (599)
..... .....++..|+|||.+.. ..++.++|||||||++++|++ |.+||.+.+..+.+..+....
T Consensus 155 ~~~~~--~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~---------- 220 (260)
T cd05070 155 NEYTA--RQGAKFPIKWTAPEAALY--GRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGY---------- 220 (260)
T ss_pred ccccc--ccCCCCCccccChHHHhc--CCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCC----------
Confidence 21111 122345667999998866 678899999999999999999 899998766544443332100
Q ss_pred HhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHH
Q 007541 258 VCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLER 337 (599)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~ 337 (599)
.. ......+..+.+||.+
T Consensus 221 -----------------------------------------------------------~~---~~~~~~~~~~~~li~~ 238 (260)
T cd05070 221 -----------------------------------------------------------RM---PCPQDCPISLHELMLQ 238 (260)
T ss_pred -----------------------------------------------------------CC---CCCCcCCHHHHHHHHH
Confidence 00 1113457789999999
Q ss_pred hcccCCCCCCCHHHHhc
Q 007541 338 MLAFEPKDRPTAEEALA 354 (599)
Q Consensus 338 mL~~DP~~RpTa~e~L~ 354 (599)
||..||.+|||+.++++
T Consensus 239 ~l~~~p~~Rpt~~~l~~ 255 (260)
T cd05070 239 CWKKDPEERPTFEYLQS 255 (260)
T ss_pred HcccCcccCcCHHHHHH
Confidence 99999999999999874
No 298
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=1.6e-37 Score=314.04 Aligned_cols=249 Identities=22% Similarity=0.348 Sum_probs=198.4
Q ss_pred CCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCcc
Q 007541 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKD 101 (599)
Q Consensus 22 ~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~ 101 (599)
.++|++++.||+|+||+||+|.+.. +..||||.+.... .....+.+|+.+++.++||||+++++++... ..
T Consensus 3 ~~~~~~~~~lg~G~~~~vy~~~~~~-~~~~aik~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~ 73 (256)
T cd05113 3 PKDLTFLKELGTGQFGVVKYGKWRG-QYDVAIKMIKEGS---MSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQ-----RP 73 (256)
T ss_pred hHHeEEeeEecCcccceEEEEEecC-CCcEEEEEcCCCc---ccHHHHHHHHHHHhcCCCCCeeeEEEEEccC-----CC
Confidence 3579999999999999999997653 4569999886422 2235678999999999999999999998433 46
Q ss_pred EEEEEecCC-cCHHHHHHhC-CCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCC
Q 007541 102 IYVVFELME-SDLHQVIKAN-DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFND 179 (599)
Q Consensus 102 iylV~E~~~-g~L~~~i~~~-~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~ 179 (599)
+|+||||+. ++|.+++... ..+++..+..++.||+.||.|||+.||+|+||||+|||++.++.+||+|||+++.....
T Consensus 74 ~~lv~e~~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~ 153 (256)
T cd05113 74 IYIVTEYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDD 153 (256)
T ss_pred cEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCCEEECCCccceecCCC
Confidence 899999998 6899999764 36899999999999999999999999999999999999999999999999999765332
Q ss_pred CCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHh-CCCCCCCCChhhHHHHHHHhcCCCCHHHHHHH
Q 007541 180 TPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLLGTPSPEAIARV 258 (599)
Q Consensus 180 ~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLlt-G~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~ 258 (599)
.... .....++..|+|||.+.+ ..++.++|||||||++|+|++ |..||...+..+....+....
T Consensus 154 ~~~~--~~~~~~~~~y~~pe~~~~--~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~----------- 218 (256)
T cd05113 154 EYTS--SVGSKFPVRWSPPEVLLY--SKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKVSQGL----------- 218 (256)
T ss_pred ceee--cCCCccChhhCCHHHHhc--CcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHhcCC-----------
Confidence 2111 112345678999999876 578999999999999999998 999997655433333222100
Q ss_pred hhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHh
Q 007541 259 CLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERM 338 (599)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~m 338 (599)
... .....+..+.+|+.+|
T Consensus 219 ----------------------------------------------------------~~~---~~~~~~~~~~~li~~c 237 (256)
T cd05113 219 ----------------------------------------------------------RLY---RPHLASEKVYAIMYSC 237 (256)
T ss_pred ----------------------------------------------------------CCC---CCCCCCHHHHHHHHHH
Confidence 000 1123567899999999
Q ss_pred cccCCCCCCCHHHHhcC
Q 007541 339 LAFEPKDRPTAEEALAD 355 (599)
Q Consensus 339 L~~DP~~RpTa~e~L~H 355 (599)
|..||.+|||+.++|.+
T Consensus 238 l~~~p~~Rp~~~~ll~~ 254 (256)
T cd05113 238 WHEKAEERPTFQQLLSS 254 (256)
T ss_pred cCCCcccCCCHHHHHHh
Confidence 99999999999999864
No 299
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=1.2e-37 Score=320.74 Aligned_cols=259 Identities=22% Similarity=0.317 Sum_probs=201.8
Q ss_pred CCceEEEEEEeecCceEEEEEEECCCC----------------cEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCcc
Q 007541 22 GSRYKIEEVIGKGSYGVVCSAYDTRTG----------------EKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIV 85 (599)
Q Consensus 22 ~~rY~i~~~LG~G~~g~V~~a~d~~tg----------------~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv 85 (599)
.++|++++.||+|+||.||+|.+..++ ..||+|++..... ......+.+|+.+|+.++|+||+
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~ 82 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDAS-DNAREDFLKEVKILSRLSDPNIA 82 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccC-HHHHHHHHHHHHHHHhcCCCCEe
Confidence 468999999999999999999877654 5689999874322 24456788999999999999999
Q ss_pred ccceeecCCCcCCCccEEEEEecCC-cCHHHHHHhCC-----------CCCHHHHHHHHHHHHhhhhhcccCceEeecCC
Q 007541 86 EIKHILLPPSRREFKDIYVVFELME-SDLHQVIKAND-----------DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLK 153 (599)
Q Consensus 86 ~l~~v~~~~s~~~~~~iylV~E~~~-g~L~~~i~~~~-----------~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLK 153 (599)
++++++... ..+++|||++. ++|.+++.... .+++..++.++.||+.||.|||++||+|||||
T Consensus 83 ~~~~~~~~~-----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlk 157 (296)
T cd05051 83 RLLGVCTVD-----PPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLA 157 (296)
T ss_pred EEEEEEecC-----CCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCccccccc
Confidence 999998433 57899999998 69999997755 68999999999999999999999999999999
Q ss_pred CCcEEeCCCCceeeeccCccccccCCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHh--CCCCC
Q 007541 154 PKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT--GKPLF 231 (599)
Q Consensus 154 P~NILv~~~~~lKL~DFGlA~~~~~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLlt--G~~pF 231 (599)
|+|||++.++.++|+|||+++........ .......++..|+|||.+.. ..++.++|||||||++|+|++ |..||
T Consensus 158 p~Nili~~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~--~~~~~~~Dv~slG~~l~el~~~~~~~p~ 234 (296)
T cd05051 158 TRNCLVGKNYTIKIADFGMSRNLYSSDYY-RVQGRAPLPIRWMAWESVLL--GKFTTKSDVWAFGVTLWEILTLCREQPY 234 (296)
T ss_pred hhceeecCCCceEEccccceeecccCcce-eecCcCCCCceecCHHHhhc--CCCCccchhhhhHHHHHHHHhcCCCCCC
Confidence 99999999999999999999764322111 11233456778999999876 578999999999999999998 66777
Q ss_pred CCCChhhHHHHHHHhcCCCCHHHHHHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHh
Q 007541 232 PGKNVVHQLDIMTDLLGTPSPEAIARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSS 311 (599)
Q Consensus 232 ~g~~~~~~l~~I~~~lG~p~~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (599)
...+....+..+.....
T Consensus 235 ~~~~~~~~~~~~~~~~~--------------------------------------------------------------- 251 (296)
T cd05051 235 EHLTDQQVIENAGHFFR--------------------------------------------------------------- 251 (296)
T ss_pred CCcChHHHHHHHHhccc---------------------------------------------------------------
Confidence 66554333322221100
Q ss_pred cccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 007541 312 MRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALA 354 (599)
Q Consensus 312 ~~~~~~~~~~~~~~~~s~~a~dLL~~mL~~DP~~RpTa~e~L~ 354 (599)
...........+..+..+.+||.+||+.||.+|||+.|+++
T Consensus 252 --~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~ 292 (296)
T cd05051 252 --DDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHL 292 (296)
T ss_pred --cccccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHH
Confidence 00000001112346688999999999999999999999965
No 300
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-38 Score=337.08 Aligned_cols=247 Identities=29% Similarity=0.446 Sum_probs=204.2
Q ss_pred CceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccE
Q 007541 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDI 102 (599)
Q Consensus 23 ~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~i 102 (599)
..+.+++.||+|-||.||.|... ....||+|.++.. ....+.+++|+.+|+.|+|+|||++++++... .-+
T Consensus 206 ~~l~l~~~LG~G~FG~V~~g~~~-~~~~vavk~ik~~---~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~-----~pi 276 (468)
T KOG0197|consen 206 EELKLIRELGSGQFGEVWLGKWN-GSTKVAVKTIKEG---SMSPEAFLREAQIMKKLRHEKLVKLYGVCTKQ-----EPI 276 (468)
T ss_pred HHHHHHHHhcCCccceEEEEEEc-CCCcccceEEecc---ccChhHHHHHHHHHHhCcccCeEEEEEEEecC-----Cce
Confidence 34566799999999999999764 2348999999753 33456677999999999999999999999432 259
Q ss_pred EEEEecCC-cCHHHHHHh--CCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCC
Q 007541 103 YVVFELME-SDLHQVIKA--NDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFND 179 (599)
Q Consensus 103 ylV~E~~~-g~L~~~i~~--~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~ 179 (599)
|||||||. |+|.++++. ...+.......|+.||++|++||+++++|||||-..||||++++.+||+|||||+...++
T Consensus 277 yIVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~ 356 (468)
T KOG0197|consen 277 YIVTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVDEDLVVKISDFGLARLIGDD 356 (468)
T ss_pred EEEEEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheeeccCceEEEcccccccccCCC
Confidence 99999999 899999997 457899999999999999999999999999999999999999999999999999954433
Q ss_pred CCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHh-CCCCCCCCChhhHHHHHHHhcCCCCHHHHHHH
Q 007541 180 TPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLLGTPSPEAIARV 258 (599)
Q Consensus 180 ~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLlt-G~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~ 258 (599)
... ...+.--+.-|.|||.+.. .+++.++||||+|++|+||+| |+.||++.+..+.++.+.+-.-.|-|
T Consensus 357 ~Y~--~~~~~kfPIkWtAPEa~~~--~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~~~le~GyRlp~P------ 426 (468)
T KOG0197|consen 357 EYT--ASEGGKFPIKWTAPEALNY--GKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEVLELLERGYRLPRP------ 426 (468)
T ss_pred cee--ecCCCCCCceecCHHHHhh--CCcccccceeehhhhHHHHhccCCCCCCCCCHHHHHHHHhccCcCCCC------
Confidence 221 1122233456999999876 789999999999999999998 99999999988877776542222211
Q ss_pred hhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHh
Q 007541 259 CLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERM 338 (599)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~m 338 (599)
+.+++.+.+++..|
T Consensus 427 ------------------------------------------------------------------~~CP~~vY~lM~~C 440 (468)
T KOG0197|consen 427 ------------------------------------------------------------------EGCPDEVYELMKSC 440 (468)
T ss_pred ------------------------------------------------------------------CCCCHHHHHHHHHH
Confidence 35788899999999
Q ss_pred cccCCCCCCCHHHHhc
Q 007541 339 LAFEPKDRPTAEEALA 354 (599)
Q Consensus 339 L~~DP~~RpTa~e~L~ 354 (599)
+..+|++|||.+.+..
T Consensus 441 W~~~P~~RPtF~~L~~ 456 (468)
T KOG0197|consen 441 WHEDPEDRPTFETLRE 456 (468)
T ss_pred hhCCcccCCCHHHHHH
Confidence 9999999999996653
No 301
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=1.1e-37 Score=314.77 Aligned_cols=248 Identities=23% Similarity=0.358 Sum_probs=197.6
Q ss_pred CceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccE
Q 007541 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDI 102 (599)
Q Consensus 23 ~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~i 102 (599)
.+|++.+.||+|+||.||+|.++ ++..+|+|++.... .....+.+|+.+++.++|+||+++++++.. ...+
T Consensus 4 ~~~~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~---~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-----~~~~ 74 (256)
T cd05059 4 SELTFLKELGSGQFGVVHLGKWR-GKIDVAIKMIREGA---MSEDDFIEEAKVMMKLSHPNLVQLYGVCTK-----QRPI 74 (256)
T ss_pred HHcchhhhhccCCCceEEEeEec-CCccEEEEEeccCC---CCHHHHHHHHHHHHhCCCCCEEEEEEEEcC-----CCce
Confidence 46889999999999999999875 56789999986422 223467789999999999999999998843 3468
Q ss_pred EEEEecCC-cCHHHHHHhC-CCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCCC
Q 007541 103 YVVFELME-SDLHQVIKAN-DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT 180 (599)
Q Consensus 103 ylV~E~~~-g~L~~~i~~~-~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~ 180 (599)
|+||||++ ++|.+++..+ ..+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++...+..
T Consensus 75 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~ 154 (256)
T cd05059 75 FIVTEYMANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQ 154 (256)
T ss_pred EEEEecCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEECCCCcEEECCcccceeccccc
Confidence 99999997 5899999764 468999999999999999999999999999999999999999999999999997653321
Q ss_pred CCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHh-CCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHh
Q 007541 181 PTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVC 259 (599)
Q Consensus 181 ~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLlt-G~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~ 259 (599)
... .....++..|+|||.+.+ ..++.++||||+||++|+|++ |+.||.+.+..+....+....
T Consensus 155 ~~~--~~~~~~~~~y~~Pe~~~~--~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~------------ 218 (256)
T cd05059 155 YTS--SQGTKFPVKWAPPEVFDY--SRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVSAGY------------ 218 (256)
T ss_pred ccc--cCCCCCCccccCHHHhcc--CCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHcCC------------
Confidence 111 111223457999999876 678999999999999999998 899997665443322221100
Q ss_pred hhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHhc
Q 007541 260 LLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERML 339 (599)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL 339 (599)
.. ......++.+.+|+.+||
T Consensus 219 ---------------------------------------------------------~~---~~~~~~~~~~~~li~~cl 238 (256)
T cd05059 219 ---------------------------------------------------------RL---YRPKLAPTEVYTIMYSCW 238 (256)
T ss_pred ---------------------------------------------------------cC---CCCCCCCHHHHHHHHHHh
Confidence 00 111246788999999999
Q ss_pred ccCCCCCCCHHHHhcC
Q 007541 340 AFEPKDRPTAEEALAD 355 (599)
Q Consensus 340 ~~DP~~RpTa~e~L~H 355 (599)
..+|++|||+.|+|+.
T Consensus 239 ~~~p~~Rpt~~~~l~~ 254 (256)
T cd05059 239 HEKPEDRPAFKKLLSQ 254 (256)
T ss_pred cCChhhCcCHHHHHHH
Confidence 9999999999999864
No 302
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=2.1e-37 Score=314.23 Aligned_cols=253 Identities=24% Similarity=0.397 Sum_probs=201.2
Q ss_pred CCceEEEEEEeecCceEEEEEEECCCCc---EEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCC
Q 007541 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGE---KVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRRE 98 (599)
Q Consensus 22 ~~rY~i~~~LG~G~~g~V~~a~d~~tg~---~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~ 98 (599)
.+.|+..+.||+|+||.||+|.++.++. .||+|++.... .......+.+|+.+++.++|+||+++.+++..
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~----- 77 (268)
T cd05063 4 PSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGY-TEKQRQDFLSEASIMGQFSHHNIIRLEGVVTK----- 77 (268)
T ss_pred hHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccC-CHHHHHHHHHHHHHHhcCCCCCeeEEEEEEcc-----
Confidence 4588999999999999999999887665 79999986432 22345678899999999999999999999843
Q ss_pred CccEEEEEecCC-cCHHHHHHhC-CCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccc
Q 007541 99 FKDIYVVFELME-SDLHQVIKAN-DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVA 176 (599)
Q Consensus 99 ~~~iylV~E~~~-g~L~~~i~~~-~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~ 176 (599)
...+|+||||++ ++|.+++... +.+++..+..++.|++.||.|||+.||+|+||||+|||++.++.+||+|||++...
T Consensus 78 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~ 157 (268)
T cd05063 78 FKPAMIITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILVNSNLECKVSDFGLSRVL 157 (268)
T ss_pred CCCcEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEEcCCCcEEECCCccceec
Confidence 347899999999 5899998764 57899999999999999999999999999999999999999999999999999765
Q ss_pred cCCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHh-CCCCCCCCChhhHHHHHHHhcCCCCHHHH
Q 007541 177 FNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLLGTPSPEAI 255 (599)
Q Consensus 177 ~~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLlt-G~~pF~g~~~~~~l~~I~~~lG~p~~e~i 255 (599)
...............+..|+|||++.. ..++.++||||+||++|+|++ |+.||...+..+....|.....
T Consensus 158 ~~~~~~~~~~~~~~~~~~y~~PE~~~~--~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~~~~~i~~~~~------- 228 (268)
T cd05063 158 EDDPEGTYTTSGGKIPIRWTAPEAIAY--RKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHEVMKAINDGFR------- 228 (268)
T ss_pred ccccccceeccCCCcCceecCHHHhhc--CCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhcCCC-------
Confidence 432221111111223456999998876 578999999999999999997 9999977655443333321100
Q ss_pred HHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHH
Q 007541 256 ARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLL 335 (599)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL 335 (599)
.+ .....+..+.+|+
T Consensus 229 --------------------------------------------------------------~~---~~~~~~~~~~~li 243 (268)
T cd05063 229 --------------------------------------------------------------LP---APMDCPSAVYQLM 243 (268)
T ss_pred --------------------------------------------------------------CC---CCCCCCHHHHHHH
Confidence 00 0123567889999
Q ss_pred HHhcccCCCCCCCHHHHhc
Q 007541 336 ERMLAFEPKDRPTAEEALA 354 (599)
Q Consensus 336 ~~mL~~DP~~RpTa~e~L~ 354 (599)
.+||+.||.+||++.++++
T Consensus 244 ~~c~~~~p~~Rp~~~~i~~ 262 (268)
T cd05063 244 LQCWQQDRARRPRFVDIVN 262 (268)
T ss_pred HHHcCCCcccCcCHHHHHH
Confidence 9999999999999999986
No 303
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=1.9e-37 Score=314.98 Aligned_cols=253 Identities=26% Similarity=0.421 Sum_probs=201.0
Q ss_pred CCceEEEEEEeecCceEEEEEEECCCCc---EEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCC
Q 007541 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGE---KVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRRE 98 (599)
Q Consensus 22 ~~rY~i~~~LG~G~~g~V~~a~d~~tg~---~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~ 98 (599)
.++|++.+.||+|+||.||+|.++.++. .||+|.++.... ......+.+|+.+|+.++||||+++++++..
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~----- 76 (267)
T cd05066 3 ASCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYT-EKQRRDFLSEASIMGQFDHPNIIHLEGVVTK----- 76 (267)
T ss_pred HHHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCC-HHHHHHHHHHHHHHHhCCCCCcceEEEEEec-----
Confidence 4689999999999999999999876554 799998865322 2345678899999999999999999999843
Q ss_pred CccEEEEEecCC-cCHHHHHHhC-CCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccc
Q 007541 99 FKDIYVVFELME-SDLHQVIKAN-DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVA 176 (599)
Q Consensus 99 ~~~iylV~E~~~-g~L~~~i~~~-~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~ 176 (599)
...+|+||||++ ++|.+++... +.+++..+..++.||+.||.|||+.|++||||||+|||++.++.+||+|||+++..
T Consensus 77 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~ 156 (267)
T cd05066 77 SKPVMIVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVNSNLVCKVSDFGLSRVL 156 (267)
T ss_pred CCccEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEECCCCeEEeCCCCccccc
Confidence 347899999998 5899999765 46899999999999999999999999999999999999999999999999999875
Q ss_pred cCCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHh-CCCCCCCCChhhHHHHHHHhcCCCCHHHH
Q 007541 177 FNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLLGTPSPEAI 255 (599)
Q Consensus 177 ~~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLlt-G~~pF~g~~~~~~l~~I~~~lG~p~~e~i 255 (599)
..............++..|+|||.+.+ ..++.++|+||+||++++|++ |..||.+.+..+....+.+..
T Consensus 157 ~~~~~~~~~~~~~~~~~~y~~pe~~~~--~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~-------- 226 (267)
T cd05066 157 EDDPEAAYTTRGGKIPIRWTAPEAIAY--RKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIKAIEEGY-------- 226 (267)
T ss_pred ccccceeeecCCCccceeecCHhHhcc--CccCchhhhHHHHHHHHHHhcCCCCCcccCCHHHHHHHHhCCC--------
Confidence 432211111112223567999999876 578999999999999999886 999997665443333222110
Q ss_pred HHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHH
Q 007541 256 ARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLL 335 (599)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL 335 (599)
..+ .....++.+.+|+
T Consensus 227 -------------------------------------------------------------~~~---~~~~~~~~~~~li 242 (267)
T cd05066 227 -------------------------------------------------------------RLP---APMDCPAALHQLM 242 (267)
T ss_pred -------------------------------------------------------------cCC---CCCCCCHHHHHHH
Confidence 000 1124577899999
Q ss_pred HHhcccCCCCCCCHHHHhc
Q 007541 336 ERMLAFEPKDRPTAEEALA 354 (599)
Q Consensus 336 ~~mL~~DP~~RpTa~e~L~ 354 (599)
.+||+.+|.+|||+.++++
T Consensus 243 ~~~l~~~p~~Rp~~~~i~~ 261 (267)
T cd05066 243 LDCWQKDRNERPKFEQIVS 261 (267)
T ss_pred HHHcccCchhCCCHHHHHH
Confidence 9999999999999999975
No 304
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=1.9e-37 Score=315.76 Aligned_cols=252 Identities=23% Similarity=0.372 Sum_probs=200.6
Q ss_pred CCceEEEEEEeecCceEEEEEEECCCC-----cEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCc
Q 007541 22 GSRYKIEEVIGKGSYGVVCSAYDTRTG-----EKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSR 96 (599)
Q Consensus 22 ~~rY~i~~~LG~G~~g~V~~a~d~~tg-----~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~ 96 (599)
.++|++.+.||+|+||.||+|.++..+ ..||+|.+.... .......+.+|+.+|+.++|+||+++++++...
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~-~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-- 81 (277)
T cd05032 5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENA-SMRERIEFLNEASVMKEFNCHHVVRLLGVVSTG-- 81 (277)
T ss_pred hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCcc-CHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCC--
Confidence 468999999999999999999987544 889999986432 223445678999999999999999999998543
Q ss_pred CCCccEEEEEecCC-cCHHHHHHhCC----------CCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCce
Q 007541 97 REFKDIYVVFELME-SDLHQVIKAND----------DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKL 165 (599)
Q Consensus 97 ~~~~~iylV~E~~~-g~L~~~i~~~~----------~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~l 165 (599)
...|+||||+. ++|.+++.... .+++..+..++.||+.||.|||++||+||||||+|||++.++.+
T Consensus 82 ---~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill~~~~~~ 158 (277)
T cd05032 82 ---QPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVAEDLTV 158 (277)
T ss_pred ---CCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccChheEEEcCCCCE
Confidence 57899999998 69999986532 36788999999999999999999999999999999999999999
Q ss_pred eeeccCccccccCCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHh-CCCCCCCCChhhHHHHHH
Q 007541 166 KICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMT 244 (599)
Q Consensus 166 KL~DFGlA~~~~~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLlt-G~~pF~g~~~~~~l~~I~ 244 (599)
||+|||+++........ .......++..|+|||.+.. ..++.++|||||||++++|++ |..||.+.+.......+.
T Consensus 159 kl~dfg~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~ 235 (277)
T cd05032 159 KIGDFGMTRDIYETDYY-RKGGKGLLPVRWMAPESLKD--GVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLKFVI 235 (277)
T ss_pred EECCcccchhhccCccc-ccCCCCCccccccCHHHHhc--CCCCcccchHHHHHHHHHhhccCCCCCccCCHHHHHHHHh
Confidence 99999999765332211 11123356778999998865 578999999999999999998 999998766443322221
Q ss_pred HhcCCCCHHHHHHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCC
Q 007541 245 DLLGTPSPEAIARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKF 324 (599)
Q Consensus 245 ~~lG~p~~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (599)
. .... ...
T Consensus 236 ~---------------------------------------------------------------------~~~~---~~~ 243 (277)
T cd05032 236 D---------------------------------------------------------------------GGHL---DLP 243 (277)
T ss_pred c---------------------------------------------------------------------CCCC---CCC
Confidence 0 0000 111
Q ss_pred CCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 007541 325 PNANPLALRLLERMLAFEPKDRPTAEEALA 354 (599)
Q Consensus 325 ~~~s~~a~dLL~~mL~~DP~~RpTa~e~L~ 354 (599)
...+..+.+||.+||+.||++|||+.++++
T Consensus 244 ~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~ 273 (277)
T cd05032 244 ENCPDKLLELMRMCWQYNPKMRPTFLEIVS 273 (277)
T ss_pred CCCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 234778999999999999999999999986
No 305
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=2.7e-37 Score=315.83 Aligned_cols=253 Identities=23% Similarity=0.341 Sum_probs=200.4
Q ss_pred CCCCceEEEEEEeecCceEEEEEEECCCCc----EEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCC
Q 007541 20 GEGSRYKIEEVIGKGSYGVVCSAYDTRTGE----KVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPS 95 (599)
Q Consensus 20 ~~~~rY~i~~~LG~G~~g~V~~a~d~~tg~----~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s 95 (599)
-..++|+++++||+|+||+||+|.+..+|+ .||+|+++... .......+.+|+.+++.+.|+||+++++++...
T Consensus 4 l~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~- 81 (279)
T cd05109 4 LKETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENT-SPKANKEILDEAYVMAGVGSPYVCRLLGICLTS- 81 (279)
T ss_pred cchhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCC-CHHHHHHHHHHHHHHHhcCCCCCceEEEEEcCC-
Confidence 346789999999999999999999877776 48999886432 223456788999999999999999999988532
Q ss_pred cCCCccEEEEEecCC-cCHHHHHHhC-CCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCcc
Q 007541 96 RREFKDIYVVFELME-SDLHQVIKAN-DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLA 173 (599)
Q Consensus 96 ~~~~~~iylV~E~~~-g~L~~~i~~~-~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA 173 (599)
..++++||+. |+|.+++..+ +.+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++
T Consensus 82 -----~~~l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~~~~~~~kL~dfG~~ 156 (279)
T cd05109 82 -----TVQLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLVKSPNHVKITDFGLA 156 (279)
T ss_pred -----CcEEEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCCCcEEECCCCce
Confidence 4689999998 7999999774 46899999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHh-CCCCCCCCChhhHHHHHHHhcCCCCH
Q 007541 174 RVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLLGTPSP 252 (599)
Q Consensus 174 ~~~~~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLlt-G~~pF~g~~~~~~l~~I~~~lG~p~~ 252 (599)
+........ .......++..|+|||.+.+ ..++.++|||||||++|||++ |..||.+.........+..
T Consensus 157 ~~~~~~~~~-~~~~~~~~~~~y~~PE~~~~--~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~------- 226 (279)
T cd05109 157 RLLDIDETE-YHADGGKVPIKWMALESILH--RRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEK------- 226 (279)
T ss_pred eecccccce-eecCCCccchhhCCHHHhcc--CCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHC-------
Confidence 865322211 11122344677999999876 678999999999999999998 8999876443222111110
Q ss_pred HHHHHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHH
Q 007541 253 EAIARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLAL 332 (599)
Q Consensus 253 e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~ 332 (599)
.... ......+..+.
T Consensus 227 --------------------------------------------------------------~~~~---~~~~~~~~~~~ 241 (279)
T cd05109 227 --------------------------------------------------------------GERL---PQPPICTIDVY 241 (279)
T ss_pred --------------------------------------------------------------CCcC---CCCccCCHHHH
Confidence 0000 11234677899
Q ss_pred HHHHHhcccCCCCCCCHHHHhc
Q 007541 333 RLLERMLAFEPKDRPTAEEALA 354 (599)
Q Consensus 333 dLL~~mL~~DP~~RpTa~e~L~ 354 (599)
+||.+||..||++|||+.+++.
T Consensus 242 ~li~~~l~~dp~~Rp~~~~l~~ 263 (279)
T cd05109 242 MIMVKCWMIDSECRPRFRELVD 263 (279)
T ss_pred HHHHHHcCCChhhCcCHHHHHH
Confidence 9999999999999999999985
No 306
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=7.4e-38 Score=316.07 Aligned_cols=247 Identities=26% Similarity=0.412 Sum_probs=201.6
Q ss_pred CceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccE
Q 007541 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDI 102 (599)
Q Consensus 23 ~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~i 102 (599)
..|+++++||.|+||.||+|.+.. +..+|+|++... .......+.+|+.+|+.++|+||+++++++.. ...+
T Consensus 6 ~~y~~~~~ig~g~~~~vy~~~~~~-~~~~~~k~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-----~~~~ 77 (261)
T cd05148 6 EEFTLERKLGSGYFGEVWEGLWKN-RVRVAIKILKSD--DLLKQQDFQKEVQALKRLRHKHLISLFAVCSV-----GEPV 77 (261)
T ss_pred HHHHHhhhhccCCCccEEEeEecC-CCcEEEEecccc--chhhHHHHHHHHHHHhcCCCcchhheeeeEec-----CCCe
Confidence 568999999999999999999987 899999998753 22245567899999999999999999998843 3468
Q ss_pred EEEEecCC-cCHHHHHHhC--CCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCC
Q 007541 103 YVVFELME-SDLHQVIKAN--DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFND 179 (599)
Q Consensus 103 ylV~E~~~-g~L~~~i~~~--~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~ 179 (599)
|+||||++ ++|.+++... ..+++..+..++.||+.||.|||++||+|+||||+|||++.++.+||+|||++......
T Consensus 78 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~ 157 (261)
T cd05148 78 YIITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVGEDLVCKVADFGLARLIKED 157 (261)
T ss_pred EEEEeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEEcCCceEEEccccchhhcCCc
Confidence 99999998 5999999763 46899999999999999999999999999999999999999999999999999765322
Q ss_pred CCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHh-CCCCCCCCChhhHHHHHHHhcCCCCHHHHHHH
Q 007541 180 TPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLLGTPSPEAIARV 258 (599)
Q Consensus 180 ~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLlt-G~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~ 258 (599)
... .....++..|+|||.+.. ..++.++|||||||++++|++ |+.||.+.+..+.+..+....
T Consensus 158 ~~~---~~~~~~~~~~~~PE~~~~--~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~----------- 221 (261)
T cd05148 158 VYL---SSDKKIPYKWTAPEAASH--GTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQITAGY----------- 221 (261)
T ss_pred ccc---ccCCCCceEecCHHHHcc--CCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHhCC-----------
Confidence 111 123345677999999876 678899999999999999998 899998776544433332110
Q ss_pred hhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHh
Q 007541 259 CLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERM 338 (599)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~m 338 (599)
.. ......++.+.++|.+|
T Consensus 222 ----------------------------------------------------------~~---~~~~~~~~~~~~~i~~~ 240 (261)
T cd05148 222 ----------------------------------------------------------RM---PCPAKCPQEIYKIMLEC 240 (261)
T ss_pred ----------------------------------------------------------cC---CCCCCCCHHHHHHHHHH
Confidence 00 01134678899999999
Q ss_pred cccCCCCCCCHHHHhc
Q 007541 339 LAFEPKDRPTAEEALA 354 (599)
Q Consensus 339 L~~DP~~RpTa~e~L~ 354 (599)
|+.||.+|||+.++++
T Consensus 241 l~~~p~~Rpt~~~l~~ 256 (261)
T cd05148 241 WAAEPEDRPSFKALRE 256 (261)
T ss_pred cCCCchhCcCHHHHHH
Confidence 9999999999999976
No 307
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00 E-value=1e-38 Score=311.55 Aligned_cols=257 Identities=24% Similarity=0.400 Sum_probs=212.0
Q ss_pred EEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcC-CCCccccceeecCCCcCCCccEEE
Q 007541 26 KIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLR-HPDIVEIKHILLPPSRREFKDIYV 104 (599)
Q Consensus 26 ~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~-HpnIv~l~~v~~~~s~~~~~~iyl 104 (599)
+++..||+|+.|+||+++.+.+|...|||.+.+. .+..+..||++.+.++.... .|+||+.+++|.... ++++
T Consensus 95 ~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt-~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~-----dV~I 168 (391)
T KOG0983|consen 95 ENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRT-GNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNT-----DVFI 168 (391)
T ss_pred hhHHhhcCCCccceEEEEEcccceEEEEEeeccc-CCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCc-----hHHH
Confidence 4578899999999999999999999999999764 34566789999999977665 899999999997654 6889
Q ss_pred EEecCCcCHHHHHHh-CCCCCHHHHHHHHHHHHhhhhhcccC-ceEeecCCCCcEEeCCCCceeeeccCccccccCCCCC
Q 007541 105 VFELMESDLHQVIKA-NDDLTPEHYQFFLYQLLRGLKYIHTA-NVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPT 182 (599)
Q Consensus 105 V~E~~~g~L~~~i~~-~~~lse~~i~~i~~QLl~aL~yLHs~-gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~~~ 182 (599)
.||+|..-+..+++. .+.++|..+-.+...++.||.||..+ ||+|||+||+|||+|+.|.+||||||.+...-...
T Consensus 169 cMelMs~C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSk-- 246 (391)
T KOG0983|consen 169 CMELMSTCAEKLLKRIKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSK-- 246 (391)
T ss_pred HHHHHHHHHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEccCCCEEeecccccceeeccc--
Confidence 999999766665553 35799999999999999999999865 89999999999999999999999999997653322
Q ss_pred cccccccccCccccCccccccc-cCCCCcchhhHhHHHHHHHHHhCCCCCCCCC-hhhHHHHHHHhcCCCCHHHHHHHhh
Q 007541 183 AIFWTDYVATRWYRAPELCGSF-FSKYTPAIDIWSIGCIFAELLTGKPLFPGKN-VVHQLDIMTDLLGTPSPEAIARVCL 260 (599)
Q Consensus 183 ~~~~t~~~gt~~Y~APE~l~~~-~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~-~~~~l~~I~~~lG~p~~e~i~~~~~ 260 (599)
..+...|-+.|||||.+.-. ..+|+..+||||||+.++||.||..||.+.+ +.+.+.+|.+..
T Consensus 247 --AhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln~e------------- 311 (391)
T KOG0983|consen 247 --AHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLNEE------------- 311 (391)
T ss_pred --ccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHhcC-------------
Confidence 23556788999999988542 4689999999999999999999999999865 445555544311
Q ss_pred hhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHhcc
Q 007541 261 LLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLA 340 (599)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL~ 340 (599)
| +....-..+|+.+++|+..||+
T Consensus 312 --------------------------------------------------------P-P~L~~~~gFSp~F~~fv~~CL~ 334 (391)
T KOG0983|consen 312 --------------------------------------------------------P-PLLPGHMGFSPDFQSFVKDCLT 334 (391)
T ss_pred --------------------------------------------------------C-CCCCcccCcCHHHHHHHHHHhh
Confidence 1 1111123478999999999999
Q ss_pred cCCCCCCCHHHHhcCccccCcc
Q 007541 341 FEPKDRPTAEEALADPYFKGLA 362 (599)
Q Consensus 341 ~DP~~RpTa~e~L~HP~f~~~~ 362 (599)
.|+.+||.-.++|+|||+....
T Consensus 335 kd~r~RP~Y~~Ll~h~Fi~~ye 356 (391)
T KOG0983|consen 335 KDHRKRPKYNKLLEHPFIKRYE 356 (391)
T ss_pred cCcccCcchHHHhcCcceeecc
Confidence 9999999999999999998653
No 308
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=100.00 E-value=1.4e-37 Score=314.06 Aligned_cols=252 Identities=29% Similarity=0.511 Sum_probs=201.5
Q ss_pred ceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCccc---ChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCc
Q 007541 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFE---HVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFK 100 (599)
Q Consensus 24 rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~---~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~ 100 (599)
||.+.+.||+|+||+||++.+..++..+++|+++.... .......+.+|+.+++.++||||+++++.+... .
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~ 75 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLER-----D 75 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcC-----C
Confidence 79999999999999999999998888888877754221 223445677899999999999999999988543 4
Q ss_pred cEEEEEecCC-cCHHHHHHh----CCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCcccc
Q 007541 101 DIYVVFELME-SDLHQVIKA----NDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARV 175 (599)
Q Consensus 101 ~iylV~E~~~-g~L~~~i~~----~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~ 175 (599)
..|+||||+. ++|.+++.. ...+++..++.++.||+.||.|||+.|++|+||||+||+++. +.+||+|||++..
T Consensus 76 ~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~~-~~~~l~d~g~~~~ 154 (260)
T cd08222 76 AFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLKN-NLLKIGDFGVSRL 154 (260)
T ss_pred ceEEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEeec-CCEeecccCceee
Confidence 6899999998 588887753 357999999999999999999999999999999999999975 5699999999976
Q ss_pred ccCCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHH
Q 007541 176 AFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAI 255 (599)
Q Consensus 176 ~~~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i 255 (599)
...... ......++..|+|||.+.. ..++.++|+||+||++++|++|..+|.+.+.......+.. +
T Consensus 155 ~~~~~~---~~~~~~~~~~~~~pe~~~~--~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~~~~~~~~--~------- 220 (260)
T cd08222 155 LMGSCD---LATTFTGTPYYMSPEALKH--QGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRIVE--G------- 220 (260)
T ss_pred cCCCcc---cccCCCCCcCccCHHHHcc--CCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHc--C-------
Confidence 533221 1223457888999998865 5788899999999999999999999976554332222110 0
Q ss_pred HHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHH
Q 007541 256 ARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLL 335 (599)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL 335 (599)
.........+..+.+||
T Consensus 221 ---------------------------------------------------------------~~~~~~~~~~~~~~~li 237 (260)
T cd08222 221 ---------------------------------------------------------------PTPSLPETYSRQLNSIM 237 (260)
T ss_pred ---------------------------------------------------------------CCCCCcchhcHHHHHHH
Confidence 00011134567899999
Q ss_pred HHhcccCCCCCCCHHHHhcCccc
Q 007541 336 ERMLAFEPKDRPTAEEALADPYF 358 (599)
Q Consensus 336 ~~mL~~DP~~RpTa~e~L~HP~f 358 (599)
.+||..||.+||++.|+|+||||
T Consensus 238 ~~~l~~~p~~Rp~~~~il~~~~~ 260 (260)
T cd08222 238 QSMLNKDPSLRPSAAEILRNPFI 260 (260)
T ss_pred HHHhcCChhhCcCHHHHhhCCCC
Confidence 99999999999999999999997
No 309
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=2.5e-37 Score=312.26 Aligned_cols=249 Identities=27% Similarity=0.418 Sum_probs=200.9
Q ss_pred CCCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCc
Q 007541 21 EGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFK 100 (599)
Q Consensus 21 ~~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~ 100 (599)
..++|++.+.||+|+||+||+|.+. .+..||||.+.... .....+.+|+.+++.++|+||+++++++.. ..
T Consensus 4 ~~~~~~i~~~ig~g~~~~v~~~~~~-~~~~~~vK~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~ 74 (261)
T cd05034 4 PRESLKLERKLGAGQFGEVWMGTWN-GTTKVAVKTLKPGT---MSPEAFLQEAQIMKKLRHDKLVQLYAVCSE-----EE 74 (261)
T ss_pred chhheeeeeeeccCcceEEEEEEEc-CCceEEEEEecCCc---cCHHHHHHHHHHHhhCCCCCEeeeeeeeec-----CC
Confidence 3578999999999999999999975 45789999987422 234568899999999999999999998843 34
Q ss_pred cEEEEEecCC-cCHHHHHHhCC--CCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCcccccc
Q 007541 101 DIYVVFELME-SDLHQVIKAND--DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAF 177 (599)
Q Consensus 101 ~iylV~E~~~-g~L~~~i~~~~--~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~ 177 (599)
.+|+||||+. ++|.+++.... .+++..+..++.||+.||.|||++||+|+||||+||+++.++.+||+|||+++...
T Consensus 75 ~~~~v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~ 154 (261)
T cd05034 75 PIYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVGENLVCKIADFGLARLIE 154 (261)
T ss_pred ceEEEEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEEcCCCCEEECccccceecc
Confidence 6899999998 59999997653 68999999999999999999999999999999999999999999999999997654
Q ss_pred CCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHh-CCCCCCCCChhhHHHHHHHhcCCCCHHHHH
Q 007541 178 NDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLLGTPSPEAIA 256 (599)
Q Consensus 178 ~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLlt-G~~pF~g~~~~~~l~~I~~~lG~p~~e~i~ 256 (599)
...... ......+..|+|||.+.+ ..++.++||||+||++++|++ |+.||.+.+....+..+......
T Consensus 155 ~~~~~~--~~~~~~~~~y~~PE~~~~--~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~------- 223 (261)
T cd05034 155 DDEYTA--REGAKFPIKWTAPEAANY--GRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQVERGYRM------- 223 (261)
T ss_pred chhhhh--hhccCCCccccCHHHhcc--CCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC-------
Confidence 321110 112234567999999876 678899999999999999998 99999877655544433221100
Q ss_pred HHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHH
Q 007541 257 RVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLE 336 (599)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~ 336 (599)
......+..+.+++.
T Consensus 224 -----------------------------------------------------------------~~~~~~~~~~~~~i~ 238 (261)
T cd05034 224 -----------------------------------------------------------------PRPPNCPEELYDLML 238 (261)
T ss_pred -----------------------------------------------------------------CCCCCCCHHHHHHHH
Confidence 011234678999999
Q ss_pred HhcccCCCCCCCHHHHhc
Q 007541 337 RMLAFEPKDRPTAEEALA 354 (599)
Q Consensus 337 ~mL~~DP~~RpTa~e~L~ 354 (599)
+||+.||.+|||++++++
T Consensus 239 ~~l~~~p~~Rp~~~~l~~ 256 (261)
T cd05034 239 QCWDKDPEERPTFEYLQS 256 (261)
T ss_pred HHcccCcccCCCHHHHHH
Confidence 999999999999999875
No 310
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=1.5e-37 Score=356.94 Aligned_cols=206 Identities=30% Similarity=0.407 Sum_probs=172.5
Q ss_pred CceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCccc-ChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCcc
Q 007541 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFE-HVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKD 101 (599)
Q Consensus 23 ~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~-~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~ 101 (599)
++|+++++||+|+||.||+|++..+|+.||||++..... ......++.+|+.+++.++||||+++++++.. ...
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d-----~~~ 76 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSD-----GDP 76 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEee-----CCE
Confidence 689999999999999999999999999999999975332 22335678899999999999999999999843 357
Q ss_pred EEEEEecCC-cCHHHHHHhC-----------CCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeec
Q 007541 102 IYVVFELME-SDLHQVIKAN-----------DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICD 169 (599)
Q Consensus 102 iylV~E~~~-g~L~~~i~~~-----------~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~D 169 (599)
+|+||||++ ++|.+++... ..++...+..++.||+.||.|||++||+||||||+|||++.++.+||+|
T Consensus 77 lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILLd~dg~vKLiD 156 (932)
T PRK13184 77 VYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILLGLFGEVVILD 156 (932)
T ss_pred EEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEEcCCCCEEEEe
Confidence 999999998 5999988641 2345667889999999999999999999999999999999999999999
Q ss_pred cCccccccCCCC---------------CcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCC
Q 007541 170 FGLARVAFNDTP---------------TAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGK 234 (599)
Q Consensus 170 FGlA~~~~~~~~---------------~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~ 234 (599)
||+++....... ........+||+.|+|||++.+ ..++.++||||+|||+++|++|+.||.+.
T Consensus 157 FGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g--~~~S~kSDIWSLGVILyELLTG~~PF~~~ 234 (932)
T PRK13184 157 WGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLG--VPASESTDIYALGVILYQMLTLSFPYRRK 234 (932)
T ss_pred cCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcC--CCCCcHhHHHHHHHHHHHHHHCCCCCCCc
Confidence 999986521110 0001123579999999999876 67899999999999999999999999764
Q ss_pred C
Q 007541 235 N 235 (599)
Q Consensus 235 ~ 235 (599)
.
T Consensus 235 ~ 235 (932)
T PRK13184 235 K 235 (932)
T ss_pred c
Confidence 4
No 311
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=8.1e-38 Score=320.13 Aligned_cols=252 Identities=21% Similarity=0.342 Sum_probs=200.1
Q ss_pred CceEEEEEEeecCceEEEEEEECCC-----CcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcC
Q 007541 23 SRYKIEEVIGKGSYGVVCSAYDTRT-----GEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRR 97 (599)
Q Consensus 23 ~rY~i~~~LG~G~~g~V~~a~d~~t-----g~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~ 97 (599)
.+|++++.||+|+||+||+|.+..+ +..||||+++.... ......+.+|+.++..++||||+++++++...
T Consensus 5 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~--- 80 (283)
T cd05091 5 STVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAE-GPLREEFKHEAMMRSRLQHPNIVCLLGVVTKE--- 80 (283)
T ss_pred HHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCC-HHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCC---
Confidence 4688899999999999999987654 57899999874322 22345678999999999999999999998543
Q ss_pred CCccEEEEEecCC-cCHHHHHHhC----------------CCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeC
Q 007541 98 EFKDIYVVFELME-SDLHQVIKAN----------------DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILAN 160 (599)
Q Consensus 98 ~~~~iylV~E~~~-g~L~~~i~~~----------------~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~ 160 (599)
..+++++||+. ++|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||++
T Consensus 81 --~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~~ 158 (283)
T cd05091 81 --QPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLVF 158 (283)
T ss_pred --CceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchhheEec
Confidence 46899999998 5899988532 2478888999999999999999999999999999999999
Q ss_pred CCCceeeeccCccccccCCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHh-CCCCCCCCChhhH
Q 007541 161 ADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQ 239 (599)
Q Consensus 161 ~~~~lKL~DFGlA~~~~~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLlt-G~~pF~g~~~~~~ 239 (599)
.++.+||+|||+++........ .......++..|+|||.+.. ..++.++|||||||+++||++ |..+|.+.+..+.
T Consensus 159 ~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~--~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~ 235 (283)
T cd05091 159 DKLNVKISDLGLFREVYAADYY-KLMGNSLLPIRWMSPEAIMY--GKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDV 235 (283)
T ss_pred CCCceEecccccccccccchhe-eeccCccCCccccCHHHHhc--CCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHHHH
Confidence 9999999999998865322211 11233456778999999865 578999999999999999998 8889987665444
Q ss_pred HHHHHHhcCCCCHHHHHHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCC
Q 007541 240 LDIMTDLLGTPSPEAIARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIP 319 (599)
Q Consensus 240 l~~I~~~lG~p~~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (599)
+..+.+.. .
T Consensus 236 ~~~i~~~~---------------------------------------------------------------------~-- 244 (283)
T cd05091 236 IEMIRNRQ---------------------------------------------------------------------V-- 244 (283)
T ss_pred HHHHHcCC---------------------------------------------------------------------c--
Confidence 33332110 0
Q ss_pred CCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 007541 320 FSQKFPNANPLALRLLERMLAFEPKDRPTAEEALAD 355 (599)
Q Consensus 320 ~~~~~~~~s~~a~dLL~~mL~~DP~~RpTa~e~L~H 355 (599)
.......+..+.+|+.+||+.||.+|||+.+++..
T Consensus 245 -~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~ 279 (283)
T cd05091 245 -LPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSR 279 (283)
T ss_pred -CCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHH
Confidence 01113467789999999999999999999999874
No 312
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=100.00 E-value=2e-37 Score=310.24 Aligned_cols=245 Identities=29% Similarity=0.493 Sum_probs=202.9
Q ss_pred EeecCceEEEEEEECCCCcEEEEEEecCccc-ChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEEEEEecC
Q 007541 31 IGKGSYGVVCSAYDTRTGEKVAIKKINDIFE-HVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVVFELM 109 (599)
Q Consensus 31 LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~-~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~iylV~E~~ 109 (599)
||.|+||.||++.+..+++.||+|.+..... .......+.+|+.+++.++|+||+++++.+. +...+|+||||+
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~~v~e~~ 75 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQ-----TEEKLYLVLEYA 75 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHee-----cCCeeEEEEecC
Confidence 6899999999999999999999999875322 2234567889999999999999999998884 345799999999
Q ss_pred C-cCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCCCCCcccccc
Q 007541 110 E-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTD 188 (599)
Q Consensus 110 ~-g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~~~~~~~t~ 188 (599)
. ++|.+++.....+++..+..++.||+.||.|||+.|++|+||+|+||+++.++.++|+|||++........ ....
T Consensus 76 ~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~---~~~~ 152 (250)
T cd05123 76 PGGELFSHLSKEGRFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEGS---RTNT 152 (250)
T ss_pred CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEcCCCcEEEeecCcceecccCCC---cccC
Confidence 5 79999999887899999999999999999999999999999999999999999999999999987543321 1234
Q ss_pred cccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHhhhhhhhhcC
Q 007541 189 YVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVCLLLNIIWCG 268 (599)
Q Consensus 189 ~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~~~~~~~~~~ 268 (599)
..++..|+|||.+.+ ..++.++|+|||||++++|++|..||...+.......+..
T Consensus 153 ~~~~~~~~~Pe~~~~--~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~----------------------- 207 (250)
T cd05123 153 FCGTPEYLAPEVLLG--KGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKILK----------------------- 207 (250)
T ss_pred CcCCccccChHHhCC--CCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhc-----------------------
Confidence 567888999999876 5688899999999999999999999976654322222211
Q ss_pred CCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCC
Q 007541 269 YDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPT 348 (599)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL~~DP~~RpT 348 (599)
... ......+..+.+||++||..||.+|||
T Consensus 208 -----------------------------------------------~~~---~~~~~~~~~l~~~i~~~l~~~p~~R~~ 237 (250)
T cd05123 208 -----------------------------------------------DPL---RFPEFLSPEARDLISGLLQKDPTKRLG 237 (250)
T ss_pred -----------------------------------------------CCC---CCCCCCCHHHHHHHHHHhcCCHhhCCC
Confidence 000 011224678999999999999999999
Q ss_pred H---HHHhcCccc
Q 007541 349 A---EEALADPYF 358 (599)
Q Consensus 349 a---~e~L~HP~f 358 (599)
+ +++++||||
T Consensus 238 ~~~~~~l~~~~~f 250 (250)
T cd05123 238 SGGAEEIKAHPFF 250 (250)
T ss_pred cccHHHHHhCCCC
Confidence 9 999999998
No 313
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=1.7e-37 Score=335.31 Aligned_cols=205 Identities=28% Similarity=0.456 Sum_probs=168.6
Q ss_pred CCceEEEEEEeecCceEEEEEEECCC-----CcEEEEEEecCcccChhhHHHHHHHHHHHHhcC-CCCccccceeecCCC
Q 007541 22 GSRYKIEEVIGKGSYGVVCSAYDTRT-----GEKVAIKKINDIFEHVSDATRILREIKLLRLLR-HPDIVEIKHILLPPS 95 (599)
Q Consensus 22 ~~rY~i~~~LG~G~~g~V~~a~d~~t-----g~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~-HpnIv~l~~v~~~~s 95 (599)
.++|+++++||+|+||+||+|.+... +..||||++.... .....+.+.+|+.+|+.+. ||||+++++++..
T Consensus 36 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~-- 112 (400)
T cd05105 36 RDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTA-RSSEKQALMSELKIMTHLGPHLNIVNLLGACTK-- 112 (400)
T ss_pred ccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCC-ChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEcc--
Confidence 57899999999999999999987543 3579999996532 2334567889999999996 9999999999843
Q ss_pred cCCCccEEEEEecCC-cCHHHHHHhC------------------------------------------------------
Q 007541 96 RREFKDIYVVFELME-SDLHQVIKAN------------------------------------------------------ 120 (599)
Q Consensus 96 ~~~~~~iylV~E~~~-g~L~~~i~~~------------------------------------------------------ 120 (599)
...+|||||||. |+|.+++..+
T Consensus 113 ---~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (400)
T cd05105 113 ---SGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYV 189 (400)
T ss_pred ---CCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccc
Confidence 347999999998 6999887542
Q ss_pred ------------------------------------------CCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEE
Q 007541 121 ------------------------------------------DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNIL 158 (599)
Q Consensus 121 ------------------------------------------~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NIL 158 (599)
..+++..+..++.||+.||+|||+.||+||||||+|||
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~Nil 269 (400)
T cd05105 190 PMLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKNCVHRDLAARNVL 269 (400)
T ss_pred hhhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHhEE
Confidence 23778888999999999999999999999999999999
Q ss_pred eCCCCceeeeccCccccccCCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHh-CCCCCCCCC
Q 007541 159 ANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKN 235 (599)
Q Consensus 159 v~~~~~lKL~DFGlA~~~~~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLlt-G~~pF~g~~ 235 (599)
++.++.+||+|||+++........ .......++..|+|||.+.+ ..++.++|||||||++++|++ |..||.+..
T Consensus 270 l~~~~~~kL~DfGla~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~--~~~~~~~DiwSlGvil~ellt~g~~P~~~~~ 344 (400)
T cd05105 270 LAQGKIVKICDFGLARDIMHDSNY-VSKGSTFLPVKWMAPESIFD--NLYTTLSDVWSYGILLWEIFSLGGTPYPGMI 344 (400)
T ss_pred EeCCCEEEEEeCCcceeccccccc-cccCCcCCCcceEChhhhcC--CCCCchhhHHHHHHHHHHHHHCCCCCCcccc
Confidence 999999999999999865332211 11123456778999999876 678999999999999999997 889987643
No 314
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=4.1e-37 Score=316.97 Aligned_cols=251 Identities=24% Similarity=0.341 Sum_probs=199.6
Q ss_pred CCceEEEEEEeecCceEEEEEEEC-----CCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCc
Q 007541 22 GSRYKIEEVIGKGSYGVVCSAYDT-----RTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSR 96 (599)
Q Consensus 22 ~~rY~i~~~LG~G~~g~V~~a~d~-----~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~ 96 (599)
..+|.+.+.||+|+||.||+|.+. .++..+++|.+... .......+.+|+.+++.++|+||+++++++..
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--- 78 (291)
T cd05094 4 RRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDP--TLAARKDFQREAELLTNLQHEHIVKFYGVCGD--- 78 (291)
T ss_pred hHHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCc--cHHHHHHHHHHHHHHhcCCCCCcceEEEEEcc---
Confidence 457999999999999999999854 34567999988642 22334567899999999999999999999843
Q ss_pred CCCccEEEEEecCC-cCHHHHHHhCC----------------CCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEe
Q 007541 97 REFKDIYVVFELME-SDLHQVIKAND----------------DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILA 159 (599)
Q Consensus 97 ~~~~~iylV~E~~~-g~L~~~i~~~~----------------~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv 159 (599)
....++||||+. ++|.+++..++ .+++..+..++.||+.||.|||++||+||||||+|||+
T Consensus 79 --~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~ 156 (291)
T cd05094 79 --GDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLV 156 (291)
T ss_pred --CCceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEE
Confidence 346899999998 69999997542 37899999999999999999999999999999999999
Q ss_pred CCCCceeeeccCccccccCCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHh-CCCCCCCCChhh
Q 007541 160 NADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVH 238 (599)
Q Consensus 160 ~~~~~lKL~DFGlA~~~~~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLlt-G~~pF~g~~~~~ 238 (599)
+.++.+||+|||++........ ........++..|+|||.+.+ ..++.++|||||||++++|++ |+.||...+..+
T Consensus 157 ~~~~~~~l~dfg~a~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~ 233 (291)
T cd05094 157 GANLLVKIGDFGMSRDVYSTDY-YRVGGHTMLPIRWMPPESIMY--RKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTE 233 (291)
T ss_pred ccCCcEEECCCCcccccCCCce-eecCCCCCcceeecChHHhcc--CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH
Confidence 9999999999999976433211 111234456788999999876 678999999999999999998 999987665433
Q ss_pred HHHHHHHhcCCCCHHHHHHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCC
Q 007541 239 QLDIMTDLLGTPSPEAIARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPI 318 (599)
Q Consensus 239 ~l~~I~~~lG~p~~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (599)
.+..+.. .
T Consensus 234 ~~~~~~~---------------------------------------------------------------------~--- 241 (291)
T cd05094 234 VIECITQ---------------------------------------------------------------------G--- 241 (291)
T ss_pred HHHHHhC---------------------------------------------------------------------C---
Confidence 3222110 0
Q ss_pred CCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 007541 319 PFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALA 354 (599)
Q Consensus 319 ~~~~~~~~~s~~a~dLL~~mL~~DP~~RpTa~e~L~ 354 (599)
.........+..+.+|+.+||+.||.+|||+.++++
T Consensus 242 ~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~ 277 (291)
T cd05094 242 RVLERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYK 277 (291)
T ss_pred CCCCCCccCCHHHHHHHHHHcccChhhCcCHHHHHH
Confidence 000111235678999999999999999999999976
No 315
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=3.3e-37 Score=311.68 Aligned_cols=247 Identities=27% Similarity=0.406 Sum_probs=199.3
Q ss_pred CCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCcc
Q 007541 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKD 101 (599)
Q Consensus 22 ~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~ 101 (599)
.++|+++++||+|+||.||+|.+. +++.||+|.+.... .....+.+|+.+|+.++|+||+++++++.. ..
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~~-~~~~~a~K~~~~~~---~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~------~~ 74 (260)
T cd05067 5 RETLKLVKKLGAGQFGEVWMGYYN-GHTKVAIKSLKQGS---MSPEAFLAEANLMKQLQHPRLVRLYAVVTQ------EP 74 (260)
T ss_pred hHHceeeeeeccCccceEEeeecC-CCceEEEEEecCCC---CcHHHHHHHHHHHHhcCCcCeeeEEEEEcc------CC
Confidence 578999999999999999999864 56889999987422 234578899999999999999999988632 35
Q ss_pred EEEEEecCC-cCHHHHHHhC--CCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccC
Q 007541 102 IYVVFELME-SDLHQVIKAN--DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFN 178 (599)
Q Consensus 102 iylV~E~~~-g~L~~~i~~~--~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~ 178 (599)
+|+||||+. ++|.+++... ..+++..+..++.||+.||+|||+.|++||||||+||+++.++.++|+|||++.....
T Consensus 75 ~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~ 154 (260)
T cd05067 75 IYIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILVSETLCCKIADFGLARLIED 154 (260)
T ss_pred cEEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEEcCCCCEEEccCcceeecCC
Confidence 899999998 6999998753 3689999999999999999999999999999999999999999999999999976532
Q ss_pred CCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHh-CCCCCCCCChhhHHHHHHHhcCCCCHHHHHH
Q 007541 179 DTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLLGTPSPEAIAR 257 (599)
Q Consensus 179 ~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLlt-G~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~ 257 (599)
.... ......++..|+|||.+.. ..++.++||||+||++++|++ |++||.+.+..+....+.....
T Consensus 155 ~~~~--~~~~~~~~~~y~~pe~~~~--~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~--------- 221 (260)
T cd05067 155 NEYT--AREGAKFPIKWTAPEAINY--GTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNLERGYR--------- 221 (260)
T ss_pred CCcc--cccCCcccccccCHHHhcc--CCcCcccchHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHcCCC---------
Confidence 2111 1123345678999999876 578899999999999999999 9999987765443333221100
Q ss_pred HhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHH
Q 007541 258 VCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLER 337 (599)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~ 337 (599)
. ......+..+.+||.+
T Consensus 222 ------------------------------------------------------------~---~~~~~~~~~~~~li~~ 238 (260)
T cd05067 222 ------------------------------------------------------------M---PRPDNCPEELYELMRL 238 (260)
T ss_pred ------------------------------------------------------------C---CCCCCCCHHHHHHHHH
Confidence 0 1112456789999999
Q ss_pred hcccCCCCCCCHHHHhc
Q 007541 338 MLAFEPKDRPTAEEALA 354 (599)
Q Consensus 338 mL~~DP~~RpTa~e~L~ 354 (599)
||..||++|||++++++
T Consensus 239 ~l~~~p~~Rp~~~~l~~ 255 (260)
T cd05067 239 CWKEKPEERPTFEYLRS 255 (260)
T ss_pred HccCChhhCCCHHHHHH
Confidence 99999999999999976
No 316
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=1.3e-37 Score=315.30 Aligned_cols=203 Identities=29% Similarity=0.500 Sum_probs=173.2
Q ss_pred CceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcc-cChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCcc
Q 007541 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIF-EHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKD 101 (599)
Q Consensus 23 ~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~-~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~ 101 (599)
++|++.+.||+|++|.||+|++..+++.||||++.... ........+.+|+.+++.++|+||+++++.+.. ...
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-----~~~ 76 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIE-----DNE 76 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEe-----CCe
Confidence 47899999999999999999999999999999886432 233344678899999999999999999999853 347
Q ss_pred EEEEEecCC-cCHHHHHHh----CCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccc
Q 007541 102 IYVVFELME-SDLHQVIKA----NDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVA 176 (599)
Q Consensus 102 iylV~E~~~-g~L~~~i~~----~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~ 176 (599)
+|+||||+. ++|.+++.. ...+++..++.++.||+.||.|||++||+|+||||+||+++.++.++|+|||++...
T Consensus 77 ~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~ 156 (267)
T cd08229 77 LNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFF 156 (267)
T ss_pred EEEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEECcchhhhcc
Confidence 899999999 589988863 346899999999999999999999999999999999999999999999999998765
Q ss_pred cCCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCC
Q 007541 177 FNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKN 235 (599)
Q Consensus 177 ~~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~ 235 (599)
...... .....++..|+|||.+.+ ..++.++|+||+||++++|++|..||.+..
T Consensus 157 ~~~~~~---~~~~~~~~~~~ape~~~~--~~~~~~~Dv~slG~il~~l~~g~~p~~~~~ 210 (267)
T cd08229 157 SSKTTA---AHSLVGTPYYMSPERIHE--NGYNFKSDIWSLGCLLYEMAALQSPFYGDK 210 (267)
T ss_pred ccCCcc---cccccCCcCccCHHHhcC--CCccchhhHHHHHHHHHHHHhCCCCccccc
Confidence 332211 234568889999999876 578899999999999999999999997543
No 317
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=4.2e-37 Score=315.02 Aligned_cols=204 Identities=28% Similarity=0.461 Sum_probs=168.1
Q ss_pred CCceEEEEEEeecCceEEEEEE----ECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcC
Q 007541 22 GSRYKIEEVIGKGSYGVVCSAY----DTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRR 97 (599)
Q Consensus 22 ~~rY~i~~~LG~G~~g~V~~a~----d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~ 97 (599)
..+|++++.||+|+||+||+|. +..+++.||||++... .......+.+|+.+|+.++||||+++++++...
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~--- 77 (284)
T cd05081 3 ERHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHS--TAEHLRDFEREIEILKSLQHDNIVKYKGVCYSA--- 77 (284)
T ss_pred cccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccC--CHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccC---
Confidence 3589999999999999999997 4567899999998642 334456788999999999999999999987543
Q ss_pred CCccEEEEEecCC-cCHHHHHHhC-CCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCcccc
Q 007541 98 EFKDIYVVFELME-SDLHQVIKAN-DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARV 175 (599)
Q Consensus 98 ~~~~iylV~E~~~-g~L~~~i~~~-~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~ 175 (599)
+...+|+||||+. ++|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.
T Consensus 78 ~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~ 157 (284)
T cd05081 78 GRRNLRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILVESENRVKIGDFGLTKV 157 (284)
T ss_pred CCCceEEEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEECCCCeEEECCCccccc
Confidence 2246899999997 6999999764 4689999999999999999999999999999999999999999999999999986
Q ss_pred ccCCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCC
Q 007541 176 AFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFP 232 (599)
Q Consensus 176 ~~~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~ 232 (599)
...............++..|+|||.+.+ ..++.++||||+||++++|++|..++.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~~l~el~~~~~~~~ 212 (284)
T cd05081 158 LPQDKEYYKVREPGESPIFWYAPESLTE--SKFSVASDVWSFGVVLYELFTYSDKSC 212 (284)
T ss_pred ccCCCcceeecCCCCCceEeeCHHHhcc--CCcChHHHHHHHHHHHHHHhhcCCcCC
Confidence 5332211111112234456999999876 678999999999999999999877654
No 318
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=100.00 E-value=2.9e-37 Score=317.07 Aligned_cols=263 Identities=22% Similarity=0.378 Sum_probs=204.9
Q ss_pred ceEEEEEEeecCceEEEEEEEC---CCCcEEEEEEecCccc--ChhhHHHHHHHHHHHHhcC-CCCccccceeecCCCcC
Q 007541 24 RYKIEEVIGKGSYGVVCSAYDT---RTGEKVAIKKINDIFE--HVSDATRILREIKLLRLLR-HPDIVEIKHILLPPSRR 97 (599)
Q Consensus 24 rY~i~~~LG~G~~g~V~~a~d~---~tg~~vAIK~i~~~~~--~~~~~~~i~rEi~iL~~l~-HpnIv~l~~v~~~~s~~ 97 (599)
.|++.+.||+|+||.||+|.+. .+++.||||.++.... ......++.+|+.++..++ |+||+++.+++..
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~---- 76 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQT---- 76 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeec----
Confidence 4899999999999999999864 4678999999864321 2233456789999999994 9999999998843
Q ss_pred CCccEEEEEecCC-cCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccc
Q 007541 98 EFKDIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVA 176 (599)
Q Consensus 98 ~~~~iylV~E~~~-g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~ 176 (599)
...+|+||||+. ++|.+.+.....+++..++.++.||+++|.|||+.|++||||||+||+++.++.++|+|||+++..
T Consensus 77 -~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~ 155 (288)
T cd05583 77 -DTKLHLILDYVNGGELFTHLYQREHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLDSEGHVVLTDFGLSKEF 155 (288)
T ss_pred -CCEEEEEEecCCCCcHHHHHhhcCCcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEEECcccccc
Confidence 347899999998 599999987778999999999999999999999999999999999999999999999999998765
Q ss_pred cCCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHH
Q 007541 177 FNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIA 256 (599)
Q Consensus 177 ~~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~ 256 (599)
...... ......++..|+|||.+.+.....+.++||||+||++++|++|..||...........+..
T Consensus 156 ~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~----------- 222 (288)
T cd05583 156 LAEEEE--RAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISR----------- 222 (288)
T ss_pred cccccc--ccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHH-----------
Confidence 332211 1123467889999998865323478899999999999999999999964332111111100
Q ss_pred HHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHH
Q 007541 257 RVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLE 336 (599)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~ 336 (599)
.... .. ......+++.+.+||.
T Consensus 223 --------------------------------------------------~~~~----~~----~~~~~~~~~~l~~li~ 244 (288)
T cd05583 223 --------------------------------------------------RILK----SK----PPFPKTMSAEARDFIQ 244 (288)
T ss_pred --------------------------------------------------HHHc----cC----CCCCcccCHHHHHHHH
Confidence 0000 00 0111336778999999
Q ss_pred HhcccCCCCCCC---HHHHhcCccccCcc
Q 007541 337 RMLAFEPKDRPT---AEEALADPYFKGLA 362 (599)
Q Consensus 337 ~mL~~DP~~RpT---a~e~L~HP~f~~~~ 362 (599)
+||+.||++||| +.++|+||||+.+.
T Consensus 245 ~~l~~~p~~R~t~~~~~~~l~~~~~~~~~ 273 (288)
T cd05583 245 KLLEKDPKKRLGANGADEIKNHPFFQGID 273 (288)
T ss_pred HHhcCCHhhccCcchHHHHhcCcccccCC
Confidence 999999999998 57789999999864
No 319
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=3.9e-37 Score=310.50 Aligned_cols=243 Identities=23% Similarity=0.401 Sum_probs=196.6
Q ss_pred CCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCcc
Q 007541 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKD 101 (599)
Q Consensus 22 ~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~ 101 (599)
..+|++.+.||+|+||.||++.. .|..||+|.++.. .....+.+|+.+++.++|+|++++++++.. +...
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~--~~~~~~~k~~~~~----~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~----~~~~ 74 (256)
T cd05082 5 MKELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKND----ATAQAFLAEASVMTQLRHSNLVQLLGVIVE----EKGG 74 (256)
T ss_pred HHhCeeeeeecccCCCeEEEEEE--cCCcEEEEEeCCC----chHHHHHHHHHHHHhCCCCCeeeEEEEEEc----CCCc
Confidence 35799999999999999999965 4889999988632 234567899999999999999999987643 2246
Q ss_pred EEEEEecCC-cCHHHHHHhCC--CCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccC
Q 007541 102 IYVVFELME-SDLHQVIKAND--DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFN 178 (599)
Q Consensus 102 iylV~E~~~-g~L~~~i~~~~--~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~ 178 (599)
+|+||||++ ++|.+++.... .+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++....
T Consensus 75 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~ 154 (256)
T cd05082 75 LYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASS 154 (256)
T ss_pred eEEEEECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEEcCCCcEEecCCccceeccc
Confidence 899999998 59999998654 478999999999999999999999999999999999999999999999999975432
Q ss_pred CCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHh-CCCCCCCCChhhHHHHHHHhcCCCCHHHHHH
Q 007541 179 DTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLLGTPSPEAIAR 257 (599)
Q Consensus 179 ~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLlt-G~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~ 257 (599)
.. .....+..|+|||++.. ..++.++||||+||++|+|++ |+.||...+..+....+..
T Consensus 155 ~~------~~~~~~~~y~aPE~~~~--~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~------------ 214 (256)
T cd05082 155 TQ------DTGKLPVKWTAPEALRE--KKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEK------------ 214 (256)
T ss_pred cC------CCCccceeecCHHHHcc--CCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhc------------
Confidence 21 12244567999999876 678899999999999999997 9999976554332222110
Q ss_pred HhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHH
Q 007541 258 VCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLER 337 (599)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~ 337 (599)
... ....+..++.+.+||.+
T Consensus 215 ---------------------------------------------------------~~~---~~~~~~~~~~~~~li~~ 234 (256)
T cd05082 215 ---------------------------------------------------------GYK---MDAPDGCPPVVYDVMKQ 234 (256)
T ss_pred ---------------------------------------------------------CCC---CCCCCCCCHHHHHHHHH
Confidence 000 01123567889999999
Q ss_pred hcccCCCCCCCHHHHhc
Q 007541 338 MLAFEPKDRPTAEEALA 354 (599)
Q Consensus 338 mL~~DP~~RpTa~e~L~ 354 (599)
||+.||++|||+.++++
T Consensus 235 ~l~~~p~~Rpt~~~l~~ 251 (256)
T cd05082 235 CWHLDAATRPSFLQLRE 251 (256)
T ss_pred HhcCChhhCcCHHHHHH
Confidence 99999999999999976
No 320
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=5.1e-37 Score=310.62 Aligned_cols=247 Identities=27% Similarity=0.385 Sum_probs=197.4
Q ss_pred CCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCcc
Q 007541 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKD 101 (599)
Q Consensus 22 ~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~ 101 (599)
.++|++.+.||+|++|.||+|.+..++ .||+|++.... .....+.+|+.+++.++|+|++++++++.. ..
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~~~~-~~~lK~~~~~~---~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~------~~ 74 (260)
T cd05069 5 RESLRLDVKLGQGCFGEVWMGTWNGTT-KVAIKTLKPGT---MMPEAFLQEAQIMKKLRHDKLVPLYAVVSE------EP 74 (260)
T ss_pred hHHeeeeeeecCcCCCeEEEEEEcCCc-eEEEEEcccCC---ccHHHHHHHHHHHHhCCCCCeeeEEEEEcC------CC
Confidence 478999999999999999999876654 59999876422 234567899999999999999999988732 24
Q ss_pred EEEEEecCC-cCHHHHHHhCC--CCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccC
Q 007541 102 IYVVFELME-SDLHQVIKAND--DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFN 178 (599)
Q Consensus 102 iylV~E~~~-g~L~~~i~~~~--~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~ 178 (599)
.|+||||+. ++|.+++.... .+++..+..++.||+.||.|||+.||+|+||||+|||++.++.+||+|||+++....
T Consensus 75 ~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~ 154 (260)
T cd05069 75 IYIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVGDNLVCKIADFGLARLIED 154 (260)
T ss_pred cEEEEEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCeEEECCCccceEccC
Confidence 799999998 59999997643 478999999999999999999999999999999999999999999999999976532
Q ss_pred CCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHh-CCCCCCCCChhhHHHHHHHhcCCCCHHHHHH
Q 007541 179 DTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLLGTPSPEAIAR 257 (599)
Q Consensus 179 ~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLlt-G~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~ 257 (599)
.... ......++..|+|||.+.+ ..++.++|||||||++|+|++ |+.||.+....+....+....
T Consensus 155 ~~~~--~~~~~~~~~~y~~Pe~~~~--~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~---------- 220 (260)
T cd05069 155 NEYT--ARQGAKFPIKWTAPEAALY--GRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVERGY---------- 220 (260)
T ss_pred Cccc--ccCCCccchhhCCHHHhcc--CCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC----------
Confidence 2211 1122345677999998876 578899999999999999999 899998765444333222100
Q ss_pred HhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHH
Q 007541 258 VCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLER 337 (599)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~ 337 (599)
.. ......+..+.+|+++
T Consensus 221 -----------------------------------------------------------~~---~~~~~~~~~~~~li~~ 238 (260)
T cd05069 221 -----------------------------------------------------------RM---PCPQGCPESLHELMKL 238 (260)
T ss_pred -----------------------------------------------------------CC---CCCcccCHHHHHHHHH
Confidence 00 1113457789999999
Q ss_pred hcccCCCCCCCHHHHhc
Q 007541 338 MLAFEPKDRPTAEEALA 354 (599)
Q Consensus 338 mL~~DP~~RpTa~e~L~ 354 (599)
||..||.+|||++++++
T Consensus 239 ~l~~~p~~Rp~~~~i~~ 255 (260)
T cd05069 239 CWKKDPDERPTFEYIQS 255 (260)
T ss_pred HccCCcccCcCHHHHHH
Confidence 99999999999999975
No 321
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=3.1e-37 Score=320.48 Aligned_cols=253 Identities=25% Similarity=0.411 Sum_probs=198.6
Q ss_pred CCceEEEEEEeecCceEEEEEEECC-------CCcEEEEEEecCcccChhhHHHHHHHHHHHHhc-CCCCccccceeecC
Q 007541 22 GSRYKIEEVIGKGSYGVVCSAYDTR-------TGEKVAIKKINDIFEHVSDATRILREIKLLRLL-RHPDIVEIKHILLP 93 (599)
Q Consensus 22 ~~rY~i~~~LG~G~~g~V~~a~d~~-------tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l-~HpnIv~l~~v~~~ 93 (599)
.++|.+.+.||+|+||.||+|.+.. ++..||+|.++... .......+.+|+.+++.+ +|+||+++++++..
T Consensus 17 ~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 95 (307)
T cd05098 17 RDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDA-TEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ 95 (307)
T ss_pred hHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCC-ChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEec
Confidence 4789999999999999999998753 23579999987432 233456788999999999 69999999999843
Q ss_pred CCcCCCccEEEEEecCC-cCHHHHHHhCC----------------CCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCc
Q 007541 94 PSRREFKDIYVVFELME-SDLHQVIKAND----------------DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKN 156 (599)
Q Consensus 94 ~s~~~~~~iylV~E~~~-g~L~~~i~~~~----------------~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~N 156 (599)
...+|+||||+. ++|.+++.... .++...+..++.||+.||+|||++|++||||||+|
T Consensus 96 -----~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~N 170 (307)
T cd05098 96 -----DGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAARN 170 (307)
T ss_pred -----CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCcccccccHHh
Confidence 347899999998 69999997642 47889999999999999999999999999999999
Q ss_pred EEeCCCCceeeeccCccccccCCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHh-CCCCCCCCC
Q 007541 157 ILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKN 235 (599)
Q Consensus 157 ILv~~~~~lKL~DFGlA~~~~~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLlt-G~~pF~g~~ 235 (599)
||++.++.+||+|||+++......... ......++..|+|||.+.+ ..++.++|||||||++|+|++ |..||.+..
T Consensus 171 ill~~~~~~kL~dfg~a~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~--~~~~~~~DvwslG~~l~el~~~g~~p~~~~~ 247 (307)
T cd05098 171 VLVTEDNVMKIADFGLARDIHHIDYYK-KTTNGRLPVKWMAPEALFD--RIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP 247 (307)
T ss_pred eEEcCCCcEEECCCcccccccccchhh-ccccCCCccceeChHHhcc--CCCCcHHHHHHHHHHHHHHHcCCCCCCCcCC
Confidence 999999999999999997643211110 0112234567999998876 578999999999999999998 889997655
Q ss_pred hhhHHHHHHHhcCCCCHHHHHHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccC
Q 007541 236 VVHQLDIMTDLLGTPSPEAIARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKK 315 (599)
Q Consensus 236 ~~~~l~~I~~~lG~p~~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (599)
..+....+.. .
T Consensus 248 ~~~~~~~~~~---------------------------------------------------------------------~ 258 (307)
T cd05098 248 VEELFKLLKE---------------------------------------------------------------------G 258 (307)
T ss_pred HHHHHHHHHc---------------------------------------------------------------------C
Confidence 4332221110 0
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 007541 316 KPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALAD 355 (599)
Q Consensus 316 ~~~~~~~~~~~~s~~a~dLL~~mL~~DP~~RpTa~e~L~H 355 (599)
.. .......+..+.+||.+||..||.+|||+.+++++
T Consensus 259 ~~---~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~ 295 (307)
T cd05098 259 HR---MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED 295 (307)
T ss_pred CC---CCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence 00 01123467889999999999999999999999874
No 322
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=5.3e-37 Score=311.79 Aligned_cols=253 Identities=26% Similarity=0.422 Sum_probs=200.7
Q ss_pred CCceEEEEEEeecCceEEEEEEECCCCc---EEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCC
Q 007541 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGE---KVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRRE 98 (599)
Q Consensus 22 ~~rY~i~~~LG~G~~g~V~~a~d~~tg~---~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~ 98 (599)
.+.|++.+.||+|+||.||+|.++.+++ .||||+++... .......+.+|+.+++.++||||+++++++..
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~----- 76 (269)
T cd05065 3 VSCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGY-TEKQRRDFLSEASIMGQFDHPNIIHLEGVVTK----- 76 (269)
T ss_pred hHHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCC-CHHHHHHHHHHHHHHHhCCCcCcceEEEEECC-----
Confidence 3569999999999999999999987765 59999987532 23345678899999999999999999999843
Q ss_pred CccEEEEEecCC-cCHHHHHHhC-CCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccc
Q 007541 99 FKDIYVVFELME-SDLHQVIKAN-DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVA 176 (599)
Q Consensus 99 ~~~iylV~E~~~-g~L~~~i~~~-~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~ 176 (599)
...+++||||++ ++|.+++... +.+++..+..++.|++.||.|||++|++|+||||+|||++.++.+||+|||+++..
T Consensus 77 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~ 156 (269)
T cd05065 77 SRPVMIITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRFL 156 (269)
T ss_pred CCceEEEEecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEEcCCCcEEECCCcccccc
Confidence 346899999998 5899988764 56899999999999999999999999999999999999999999999999999765
Q ss_pred cCCCCCcccccc--cccCccccCccccccccCCCCcchhhHhHHHHHHHHHh-CCCCCCCCChhhHHHHHHHhcCCCCHH
Q 007541 177 FNDTPTAIFWTD--YVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLLGTPSPE 253 (599)
Q Consensus 177 ~~~~~~~~~~t~--~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLlt-G~~pF~g~~~~~~l~~I~~~lG~p~~e 253 (599)
............ ...+..|+|||.+.. ..++.++||||+||+++||++ |..||.+.+..+....+....
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~--~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~~~~i~~~~------ 228 (269)
T cd05065 157 EDDTSDPTYTSSLGGKIPIRWTAPEAIAY--RKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAIEQDY------ 228 (269)
T ss_pred ccCccccccccccCCCcceeecCHhHhcc--CcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCC------
Confidence 432221111111 112457999999876 678999999999999999886 999997765444333322110
Q ss_pred HHHHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHH
Q 007541 254 AIARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALR 333 (599)
Q Consensus 254 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~d 333 (599)
..+ .....+..+.+
T Consensus 229 ---------------------------------------------------------------~~~---~~~~~~~~~~~ 242 (269)
T cd05065 229 ---------------------------------------------------------------RLP---PPMDCPTALHQ 242 (269)
T ss_pred ---------------------------------------------------------------cCC---CcccCCHHHHH
Confidence 000 11345678999
Q ss_pred HHHHhcccCCCCCCCHHHHhc
Q 007541 334 LLERMLAFEPKDRPTAEEALA 354 (599)
Q Consensus 334 LL~~mL~~DP~~RpTa~e~L~ 354 (599)
|+.+||..||.+||++++++.
T Consensus 243 li~~~l~~~p~~Rp~~~~i~~ 263 (269)
T cd05065 243 LMLDCWQKDRNARPKFGQIVS 263 (269)
T ss_pred HHHHHcCCChhhCcCHHHHHH
Confidence 999999999999999999986
No 323
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=5.4e-37 Score=309.16 Aligned_cols=243 Identities=26% Similarity=0.434 Sum_probs=198.9
Q ss_pred CCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCcc
Q 007541 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKD 101 (599)
Q Consensus 22 ~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~ 101 (599)
.+.|++.+.||.|+||.||+|.+. |+.||||++..... ...++.+|+.+++.++|+||+++++++.. ...
T Consensus 5 ~~~~~~~~~ig~g~~g~v~~~~~~--~~~v~iK~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-----~~~ 74 (256)
T cd05039 5 SKELKLGATIGKGEFGDVMLGDYR--GQKVAVKCLKDDST---AAQAFLAEASVMTTLRHPNLVQLLGVVLQ-----GNP 74 (256)
T ss_pred hhhccceeeeecCCCceEEEEEec--CcEEEEEEeccchh---HHHHHHHHHHHHHhcCCcceeeeEEEEcC-----CCC
Confidence 568999999999999999999764 88999999975322 46678899999999999999999999854 347
Q ss_pred EEEEEecCC-cCHHHHHHhCC--CCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccC
Q 007541 102 IYVVFELME-SDLHQVIKAND--DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFN 178 (599)
Q Consensus 102 iylV~E~~~-g~L~~~i~~~~--~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~ 178 (599)
.|+||||+. ++|.+++.... .+++..++.++.||+.||.|||++||+|+||||+|||++.++.+||+|||+++....
T Consensus 75 ~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~ 154 (256)
T cd05039 75 LYIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQ 154 (256)
T ss_pred eEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEEeCCCCEEEccccccccccc
Confidence 899999999 69999998765 689999999999999999999999999999999999999999999999999986522
Q ss_pred CCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHh-CCCCCCCCChhhHHHHHHHhcCCCCHHHHHH
Q 007541 179 DTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLLGTPSPEAIAR 257 (599)
Q Consensus 179 ~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLlt-G~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~ 257 (599)
.. .....+..|+|||.+.. ..++.++|||||||++++|++ |..||......+....+..
T Consensus 155 ~~------~~~~~~~~~~ape~~~~--~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~------------ 214 (256)
T cd05039 155 GQ------DSGKLPVKWTAPEALRE--KKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHVEK------------ 214 (256)
T ss_pred cc------ccCCCcccccCchhhcC--CcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhc------------
Confidence 11 12234567999998865 578899999999999999997 9999976543332211110
Q ss_pred HhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHH
Q 007541 258 VCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLER 337 (599)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~ 337 (599)
... .......++.+.+||.+
T Consensus 215 ---------------------------------------------------------~~~---~~~~~~~~~~~~~li~~ 234 (256)
T cd05039 215 ---------------------------------------------------------GYR---MEAPEGCPPEVYKVMKD 234 (256)
T ss_pred ---------------------------------------------------------CCC---CCCccCCCHHHHHHHHH
Confidence 000 01112457889999999
Q ss_pred hcccCCCCCCCHHHHhc
Q 007541 338 MLAFEPKDRPTAEEALA 354 (599)
Q Consensus 338 mL~~DP~~RpTa~e~L~ 354 (599)
||..||.+|||+.|+++
T Consensus 235 ~l~~~p~~Rp~~~~l~~ 251 (256)
T cd05039 235 CWELDPAKRPTFKQLRE 251 (256)
T ss_pred HhccChhhCcCHHHHHH
Confidence 99999999999999986
No 324
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=3.6e-37 Score=315.65 Aligned_cols=204 Identities=28% Similarity=0.421 Sum_probs=167.4
Q ss_pred Cce-EEEEEEeecCceEEEEEE----ECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcC
Q 007541 23 SRY-KIEEVIGKGSYGVVCSAY----DTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRR 97 (599)
Q Consensus 23 ~rY-~i~~~LG~G~~g~V~~a~----d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~ 97 (599)
+|| ++++.||+|+||+||++. ...++..||+|.+.... .......+.+|+.+|+.++||||+++++++...
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~--- 78 (283)
T cd05080 3 KRYLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKREC-GQQNTSGWKKEINILKTLYHENIVKYKGCCSEQ--- 78 (283)
T ss_pred hhhceeceecccCCCcEEEEeeEccccCCCCceEEEEEecccc-ChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC---
Confidence 566 999999999999998764 34578899999986432 223456678999999999999999999987432
Q ss_pred CCccEEEEEecCC-cCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccc
Q 007541 98 EFKDIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVA 176 (599)
Q Consensus 98 ~~~~iylV~E~~~-g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~ 176 (599)
+...+|+||||+. ++|.+++... .+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++..
T Consensus 79 ~~~~~~lv~e~~~~~~l~~~~~~~-~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~ 157 (283)
T cd05080 79 GGKGLQLIMEYVPLGSLRDYLPKH-KLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAV 157 (283)
T ss_pred CCceEEEEecCCCCCCHHHHHHHc-CCCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEEcCCCcEEEeeccccccc
Confidence 2346899999999 5899988765 5999999999999999999999999999999999999999999999999999865
Q ss_pred cCCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCC
Q 007541 177 FNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPG 233 (599)
Q Consensus 177 ~~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g 233 (599)
..............++..|+|||.+.. ..++.++|||||||++++|++|..||..
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~PE~~~~--~~~~~~~Di~slG~~l~el~tg~~p~~~ 212 (283)
T cd05080 158 PEGHEYYRVREDGDSPVFWYAVECLKE--NKFSYASDVWSFGVTLYELLTHCDSKQS 212 (283)
T ss_pred CCcchhhccCCCCCCCceeeCHhHhcc--cCCCcccccHHHHHHHHHHHhCCCCCCC
Confidence 432211111122345667999998876 5788999999999999999999988754
No 325
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=100.00 E-value=2.4e-37 Score=346.98 Aligned_cols=278 Identities=20% Similarity=0.258 Sum_probs=189.0
Q ss_pred CCCceEEEEEEeecCceEEEEEEECCC----CcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCc
Q 007541 21 EGSRYKIEEVIGKGSYGVVCSAYDTRT----GEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSR 96 (599)
Q Consensus 21 ~~~rY~i~~~LG~G~~g~V~~a~d~~t----g~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~ 96 (599)
..++|++.+.||+|+||+||+|.+..+ +..||||++.... ..+....| .++...+.++..+...+.....
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~----~~e~~~~e--~l~~~~~~~~~~~~~~~~~~~~ 203 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYG----AVEIWMNE--RVRRACPNSCADFVYGFLEPVS 203 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccc----hhHHHHHH--HHHhhchhhHHHHHHhhhcccc
Confidence 457899999999999999999999999 9999999986421 11111111 1222233444444443332221
Q ss_pred -CCCccEEEEEecCC-cCHHHHHHhCCC--------------------CCHHHHHHHHHHHHhhhhhcccCceEeecCCC
Q 007541 97 -REFKDIYVVFELME-SDLHQVIKANDD--------------------LTPEHYQFFLYQLLRGLKYIHTANVFHRDLKP 154 (599)
Q Consensus 97 -~~~~~iylV~E~~~-g~L~~~i~~~~~--------------------lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP 154 (599)
.....++||+||++ ++|.+++..... ..+..++.++.||+.||.|||++||+||||||
T Consensus 204 ~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRDLKP 283 (566)
T PLN03225 204 SKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRDVKP 283 (566)
T ss_pred cccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCcCCH
Confidence 44567999999999 589998875421 12345778999999999999999999999999
Q ss_pred CcEEeCC-CCceeeeccCccccccCCCCCcccccccccCccccCcccccccc--------------------CCCCcchh
Q 007541 155 KNILANA-DCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFF--------------------SKYTPAID 213 (599)
Q Consensus 155 ~NILv~~-~~~lKL~DFGlA~~~~~~~~~~~~~t~~~gt~~Y~APE~l~~~~--------------------~~ys~~~D 213 (599)
+|||++. ++.+||+|||+|+....... .....+++|+.|+|||.+.... ..++.++|
T Consensus 284 ~NILl~~~~~~~KL~DFGlA~~l~~~~~--~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~D 361 (566)
T PLN03225 284 QNIIFSEGSGSFKIIDLGAAADLRVGIN--YIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFD 361 (566)
T ss_pred HHEEEeCCCCcEEEEeCCCccccccccc--cCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcc
Confidence 9999986 58999999999975432211 1224568899999999653210 12445679
Q ss_pred hHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHH
Q 007541 214 IWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEV 293 (599)
Q Consensus 214 IWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (599)
|||+|||||||+++. |+..+...++..+....+.....+...
T Consensus 362 VwSlGviL~el~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~~~------------------------------------ 403 (566)
T PLN03225 362 IYSAGLIFLQMAFPN--LRSDSNLIQFNRQLKRNDYDLVAWRKL------------------------------------ 403 (566)
T ss_pred cHHHHHHHHHHHhCc--CCCchHHHHHHHHHHhcCCcHHHHHHh------------------------------------
Confidence 999999999999865 444555555555544444322211100
Q ss_pred HHHhhhcccHHHHHHHHhcccCCCCC---CCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccccCcc
Q 007541 294 LILHCQVRNEKARRYLSSMRKKKPIP---FSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLA 362 (599)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~s~~a~dLL~~mL~~DP~~RpTa~e~L~HP~f~~~~ 362 (599)
+ ....... ..+.+...+..+.|||.+||++||.+|||+.|+|+||||++..
T Consensus 404 ---------------~---~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP~kR~ta~e~L~Hpff~~~~ 457 (566)
T PLN03225 404 ---------------V---EPRASPDLRRGFEVLDLDGGAGWELLKSMMRFKGRQRISAKAALAHPYFDREG 457 (566)
T ss_pred ---------------h---ccccchhhhhhhhhccccchHHHHHHHHHccCCcccCCCHHHHhCCcCcCCCC
Confidence 0 0000000 0111223455678999999999999999999999999998754
No 326
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=5e-37 Score=309.32 Aligned_cols=246 Identities=23% Similarity=0.359 Sum_probs=197.3
Q ss_pred EEEeecCceEEEEEEECC-CCc--EEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEEEE
Q 007541 29 EVIGKGSYGVVCSAYDTR-TGE--KVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVV 105 (599)
Q Consensus 29 ~~LG~G~~g~V~~a~d~~-tg~--~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~iylV 105 (599)
++||+|++|+||+|.+.. +++ .||||.+...... .....+.+|+.+|+.++|+||+++++++.. ..+++|
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~------~~~~~v 73 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLS-DIMDDFLKEAAIMHSLDHENLIRLYGVVLT------HPLMMV 73 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccH-HHHHHHHHHHHHHhhcCCCCccceeEEEcC------CeEEEE
Confidence 468999999999999866 333 6999998764333 456788899999999999999999999854 478999
Q ss_pred EecCC-cCHHHHHHhCC--CCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCCCCC
Q 007541 106 FELME-SDLHQVIKAND--DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPT 182 (599)
Q Consensus 106 ~E~~~-g~L~~~i~~~~--~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~~~ 182 (599)
+||+. ++|.+++.... .+++..++.++.||+.||.|||++|++|+||||+|||++.++.+||+|||+++........
T Consensus 74 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~ 153 (257)
T cd05040 74 TELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDH 153 (257)
T ss_pred EEecCCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEEecCCEEEeccccccccccccccc
Confidence 99997 69999998764 6899999999999999999999999999999999999999999999999999876432221
Q ss_pred cccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHh-CCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHhhh
Q 007541 183 AIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVCLL 261 (599)
Q Consensus 183 ~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLlt-G~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~~~ 261 (599)
........++..|+|||.+.+ ..++.++|||||||++++|++ |+.||.+.+..+.+..+....
T Consensus 154 ~~~~~~~~~~~~y~~pE~~~~--~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~-------------- 217 (257)
T cd05040 154 YVMEEHLKVPFAWCAPESLRT--RTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKIDKEG-------------- 217 (257)
T ss_pred eecccCCCCCceecCHHHhcc--cCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcC--------------
Confidence 111123456778999999876 678999999999999999998 999997766544333322100
Q ss_pred hhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHhccc
Q 007541 262 LNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAF 341 (599)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL~~ 341 (599)
... ......+..+.+|+.+||+.
T Consensus 218 ------------------------------------------------------~~~---~~~~~~~~~~~~li~~~l~~ 240 (257)
T cd05040 218 ------------------------------------------------------ERL---ERPEACPQDIYNVMLQCWAH 240 (257)
T ss_pred ------------------------------------------------------CcC---CCCccCCHHHHHHHHHHCCC
Confidence 000 01123567899999999999
Q ss_pred CCCCCCCHHHHhc
Q 007541 342 EPKDRPTAEEALA 354 (599)
Q Consensus 342 DP~~RpTa~e~L~ 354 (599)
+|++|||+.|+++
T Consensus 241 ~p~~Rps~~~~~~ 253 (257)
T cd05040 241 NPADRPTFAALRE 253 (257)
T ss_pred CcccCCCHHHHHH
Confidence 9999999999986
No 327
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=5.9e-37 Score=316.37 Aligned_cols=259 Identities=22% Similarity=0.367 Sum_probs=198.1
Q ss_pred CCceEEEEEEeecCceEEEEEEECCCC--------------cEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCcccc
Q 007541 22 GSRYKIEEVIGKGSYGVVCSAYDTRTG--------------EKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEI 87 (599)
Q Consensus 22 ~~rY~i~~~LG~G~~g~V~~a~d~~tg--------------~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l 87 (599)
.++|++.+.||+|+||.||+|++..++ ..||+|+++... .......+.+|+.+|+.++|+||+++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~ei~~l~~l~h~~i~~~ 82 (295)
T cd05097 4 RQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADV-TKTARNDFLKEIKIMSRLKNPNIIRL 82 (295)
T ss_pred hHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCC-CHHHHHHHHHHHHHHHhCCCCCcCeE
Confidence 368999999999999999999876432 359999987432 22344568899999999999999999
Q ss_pred ceeecCCCcCCCccEEEEEecCC-cCHHHHHHhCC------------CCCHHHHHHHHHHHHhhhhhcccCceEeecCCC
Q 007541 88 KHILLPPSRREFKDIYVVFELME-SDLHQVIKAND------------DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKP 154 (599)
Q Consensus 88 ~~v~~~~s~~~~~~iylV~E~~~-g~L~~~i~~~~------------~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP 154 (599)
++++... ..+|+||||+. ++|.+++.... .+++..+..++.||+.||.|||+.|++||||||
T Consensus 83 ~~~~~~~-----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp 157 (295)
T cd05097 83 LGVCVSD-----DPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLAT 157 (295)
T ss_pred EEEEcCC-----CccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccccCh
Confidence 9998433 47899999998 59999886532 367888999999999999999999999999999
Q ss_pred CcEEeCCCCceeeeccCccccccCCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHh--CCCCCC
Q 007541 155 KNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT--GKPLFP 232 (599)
Q Consensus 155 ~NILv~~~~~lKL~DFGlA~~~~~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLlt--G~~pF~ 232 (599)
+|||++.++.+||+|||+++........ .......++..|+|||.+.. ..++.++|||||||++++|++ |..||.
T Consensus 158 ~Nill~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~--~~~~~~~DvwSlG~~l~el~~~~~~~p~~ 234 (295)
T cd05097 158 RNCLVGNHYTIKIADFGMSRNLYSGDYY-RIQGRAVLPIRWMAWESILL--GKFTTASDVWAFGVTLWEMFTLCKEQPYS 234 (295)
T ss_pred hhEEEcCCCcEEecccccccccccCcce-eccCcCcCceeecChhhhcc--CCcCchhhHHHHHHHHHHHHHcCCCCCCc
Confidence 9999999999999999999764322111 11123345678999998876 578999999999999999988 567777
Q ss_pred CCChhhHHHHHHHhcCCCCHHHHHHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhc
Q 007541 233 GKNVVHQLDIMTDLLGTPSPEAIARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSM 312 (599)
Q Consensus 233 g~~~~~~l~~I~~~lG~p~~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (599)
..+....+..+.... ...
T Consensus 235 ~~~~~~~~~~~~~~~--------------------------------------------------------------~~~ 252 (295)
T cd05097 235 LLSDEQVIENTGEFF--------------------------------------------------------------RNQ 252 (295)
T ss_pred ccChHHHHHHHHHhh--------------------------------------------------------------hhc
Confidence 655443332221100 000
Q ss_pred ccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 007541 313 RKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALA 354 (599)
Q Consensus 313 ~~~~~~~~~~~~~~~s~~a~dLL~~mL~~DP~~RpTa~e~L~ 354 (599)
.........+..++.+.+||.+||+.||.+|||++++++
T Consensus 253 ---~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~ 291 (295)
T cd05097 253 ---GRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHH 291 (295)
T ss_pred ---cccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 000011122346788999999999999999999999975
No 328
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=6.7e-37 Score=317.33 Aligned_cols=254 Identities=24% Similarity=0.410 Sum_probs=200.7
Q ss_pred CCCceEEEEEEeecCceEEEEEEEC-------CCCcEEEEEEecCcccChhhHHHHHHHHHHHHhc-CCCCccccceeec
Q 007541 21 EGSRYKIEEVIGKGSYGVVCSAYDT-------RTGEKVAIKKINDIFEHVSDATRILREIKLLRLL-RHPDIVEIKHILL 92 (599)
Q Consensus 21 ~~~rY~i~~~LG~G~~g~V~~a~d~-------~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l-~HpnIv~l~~v~~ 92 (599)
..++|.+.+.||+|+||.||+|++. ..+..||+|++.... .......+.+|+.+++.+ +||||+++++++.
T Consensus 13 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~ 91 (304)
T cd05101 13 SRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDA-TEKDLSDLVSEMEMMKMIGKHKNIINLLGACT 91 (304)
T ss_pred cHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeeccccc-chHHHHHHHHHHHHHHhhccCCCchheeEEEe
Confidence 3678999999999999999999753 234579999886432 234456788999999999 7999999999984
Q ss_pred CCCcCCCccEEEEEecCC-cCHHHHHHhC----------------CCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCC
Q 007541 93 PPSRREFKDIYVVFELME-SDLHQVIKAN----------------DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPK 155 (599)
Q Consensus 93 ~~s~~~~~~iylV~E~~~-g~L~~~i~~~----------------~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~ 155 (599)
. ...+|+||||+. ++|.+++... ..++...+..++.||+.||.|||++||+||||||+
T Consensus 92 ~-----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp~ 166 (304)
T cd05101 92 Q-----DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAAR 166 (304)
T ss_pred c-----CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecccccc
Confidence 3 347899999998 6999999753 24677889999999999999999999999999999
Q ss_pred cEEeCCCCceeeeccCccccccCCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHh-CCCCCCCC
Q 007541 156 NILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGK 234 (599)
Q Consensus 156 NILv~~~~~lKL~DFGlA~~~~~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLlt-G~~pF~g~ 234 (599)
|||++.++.+||+|||+++......... ......++..|+|||++.+ ..++.++|||||||++++|++ |..+|.+.
T Consensus 167 Nili~~~~~~kl~D~g~~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~~l~el~~~g~~p~~~~ 243 (304)
T cd05101 167 NVLVTENNVMKIADFGLARDVNNIDYYK-KTTNGRLPVKWMAPEALFD--RVYTHQSDVWSFGVLMWEIFTLGGSPYPGI 243 (304)
T ss_pred eEEEcCCCcEEECCCccceecccccccc-cccCCCCCceeeCchhhcc--CCCCchhhHHHHHHHHHHHHcCCCCCcccC
Confidence 9999999999999999998653322111 1122345678999999876 678999999999999999998 88889876
Q ss_pred ChhhHHHHHHHhcCCCCHHHHHHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhccc
Q 007541 235 NVVHQLDIMTDLLGTPSPEAIARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRK 314 (599)
Q Consensus 235 ~~~~~l~~I~~~lG~p~~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (599)
+..+....+...
T Consensus 244 ~~~~~~~~~~~~-------------------------------------------------------------------- 255 (304)
T cd05101 244 PVEELFKLLKEG-------------------------------------------------------------------- 255 (304)
T ss_pred CHHHHHHHHHcC--------------------------------------------------------------------
Confidence 544433322110
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 007541 315 KKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALAD 355 (599)
Q Consensus 315 ~~~~~~~~~~~~~s~~a~dLL~~mL~~DP~~RpTa~e~L~H 355 (599)
.. .......+..+.+||.+||..+|.+|||+.|+|+.
T Consensus 256 -~~---~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~ 292 (304)
T cd05101 256 -HR---MDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVED 292 (304)
T ss_pred -Cc---CCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHH
Confidence 00 01113467889999999999999999999999874
No 329
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=7.4e-37 Score=318.87 Aligned_cols=252 Identities=25% Similarity=0.422 Sum_probs=198.5
Q ss_pred CCceEEEEEEeecCceEEEEEEECC-------CCcEEEEEEecCcccChhhHHHHHHHHHHHHhc-CCCCccccceeecC
Q 007541 22 GSRYKIEEVIGKGSYGVVCSAYDTR-------TGEKVAIKKINDIFEHVSDATRILREIKLLRLL-RHPDIVEIKHILLP 93 (599)
Q Consensus 22 ~~rY~i~~~LG~G~~g~V~~a~d~~-------tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l-~HpnIv~l~~v~~~ 93 (599)
.++|.+.+.||+|+||.||+|.+.. ....||+|.++... .......+.+|+.+++.+ +||||+++++++..
T Consensus 11 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~ 89 (314)
T cd05099 11 RDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNA-TDKDLADLISEMELMKLIGKHKNIINLLGVCTQ 89 (314)
T ss_pred HHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCC-ChHHHHHHHHHHHHHHhccCCCCeeeEEEEEcc
Confidence 3689999999999999999998643 34579999887432 233456788999999999 59999999999843
Q ss_pred CCcCCCccEEEEEecCC-cCHHHHHHhC----------------CCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCc
Q 007541 94 PSRREFKDIYVVFELME-SDLHQVIKAN----------------DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKN 156 (599)
Q Consensus 94 ~s~~~~~~iylV~E~~~-g~L~~~i~~~----------------~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~N 156 (599)
...+|+||||+. ++|.+++... ..++...+..++.||+.||.|||++||+||||||+|
T Consensus 90 -----~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~N 164 (314)
T cd05099 90 -----EGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARN 164 (314)
T ss_pred -----CCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeecccccee
Confidence 346899999998 6999999753 247888999999999999999999999999999999
Q ss_pred EEeCCCCceeeeccCccccccCCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHh-CCCCCCCCC
Q 007541 157 ILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKN 235 (599)
Q Consensus 157 ILv~~~~~lKL~DFGlA~~~~~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLlt-G~~pF~g~~ 235 (599)
||++.++.+||+|||+++......... ......++..|+|||.+.+ ..++.++|||||||++|+|++ |..||.+.+
T Consensus 165 ill~~~~~~kL~Dfg~~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~--~~~~~~~DiwslG~~l~el~~~g~~p~~~~~ 241 (314)
T cd05099 165 VLVTEDNVMKIADFGLARGVHDIDYYK-KTSNGRLPVKWMAPEALFD--RVYTHQSDVWSFGILMWEIFTLGGSPYPGIP 241 (314)
T ss_pred EEEcCCCcEEEcccccccccccccccc-ccccCCCCccccCHHHHcc--CCcCccchhhHHHHHHHHHHhCCCCCCCCCC
Confidence 999999999999999998653221111 0111233457999999876 678999999999999999999 889998765
Q ss_pred hhhHHHHHHHhcCCCCHHHHHHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccC
Q 007541 236 VVHQLDIMTDLLGTPSPEAIARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKK 315 (599)
Q Consensus 236 ~~~~l~~I~~~lG~p~~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (599)
..+.+..+.. .
T Consensus 242 ~~~~~~~~~~---------------------------------------------------------------------~ 252 (314)
T cd05099 242 VEELFKLLRE---------------------------------------------------------------------G 252 (314)
T ss_pred HHHHHHHHHc---------------------------------------------------------------------C
Confidence 4443332211 0
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 007541 316 KPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALA 354 (599)
Q Consensus 316 ~~~~~~~~~~~~s~~a~dLL~~mL~~DP~~RpTa~e~L~ 354 (599)
.. .......+..+.+||.+||..||++|||+.|+++
T Consensus 253 ~~---~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~ 288 (314)
T cd05099 253 HR---MDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVE 288 (314)
T ss_pred CC---CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 00 0112346778999999999999999999999986
No 330
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=6.8e-37 Score=317.77 Aligned_cols=253 Identities=26% Similarity=0.409 Sum_probs=199.7
Q ss_pred CCceEEEEEEeecCceEEEEEEE-----CCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhc-CCCCccccceeecCCC
Q 007541 22 GSRYKIEEVIGKGSYGVVCSAYD-----TRTGEKVAIKKINDIFEHVSDATRILREIKLLRLL-RHPDIVEIKHILLPPS 95 (599)
Q Consensus 22 ~~rY~i~~~LG~G~~g~V~~a~d-----~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l-~HpnIv~l~~v~~~~s 95 (599)
.++|.+.+.||+|+||.||+|.+ ..++..||||+++... .......+.+|+.+++.+ +|+||+++++.+...
T Consensus 34 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~- 111 (302)
T cd05055 34 RNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTA-HSSEREALMSELKIMSHLGNHENIVNLLGACTIG- 111 (302)
T ss_pred HHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccC-ChHHHHHHHHHHHHHHhccCCCCcceEEEEEecC-
Confidence 46899999999999999999976 3356689999987532 233456788999999999 799999999988433
Q ss_pred cCCCccEEEEEecCC-cCHHHHHHhCC--CCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCc
Q 007541 96 RREFKDIYVVFELME-SDLHQVIKAND--DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGL 172 (599)
Q Consensus 96 ~~~~~~iylV~E~~~-g~L~~~i~~~~--~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGl 172 (599)
..+|+||||+. ++|.+++.... .+++..+..++.||+.||.|||++||+|+||||+|||++.++.+||+|||+
T Consensus 112 ----~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~dfg~ 187 (302)
T cd05055 112 ----GPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLLTHGKIVKICDFGL 187 (302)
T ss_pred ----CceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEEcCCCeEEECCCcc
Confidence 46899999998 69999997643 389999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHh-CCCCCCCCChhhHHHHHHHhcCCCC
Q 007541 173 ARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLLGTPS 251 (599)
Q Consensus 173 A~~~~~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLlt-G~~pF~g~~~~~~l~~I~~~lG~p~ 251 (599)
++........ .......++..|+|||.+.. ..++.++||||+||++++|++ |..||.+......+..+..
T Consensus 188 ~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~--~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~~~~~------ 258 (302)
T cd05055 188 ARDIMNDSNY-VVKGNARLPVKWMAPESIFN--CVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKLIK------ 258 (302)
T ss_pred cccccCCCce-eecCCCCcccccCCHhhhcc--CCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHHHHHH------
Confidence 9765332211 11123345778999998876 578999999999999999998 9999976543222111110
Q ss_pred HHHHHHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHH
Q 007541 252 PEAIARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLA 331 (599)
Q Consensus 252 ~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a 331 (599)
..... ......++.+
T Consensus 259 --------------------------------------------------------------~~~~~---~~~~~~~~~~ 273 (302)
T cd05055 259 --------------------------------------------------------------EGYRM---AQPEHAPAEI 273 (302)
T ss_pred --------------------------------------------------------------cCCcC---CCCCCCCHHH
Confidence 00000 0112457889
Q ss_pred HHHHHHhcccCCCCCCCHHHHhc
Q 007541 332 LRLLERMLAFEPKDRPTAEEALA 354 (599)
Q Consensus 332 ~dLL~~mL~~DP~~RpTa~e~L~ 354 (599)
.+|+.+||..||++|||+.|+++
T Consensus 274 ~~li~~cl~~~p~~Rpt~~ell~ 296 (302)
T cd05055 274 YDIMKTCWDADPLKRPTFKQIVQ 296 (302)
T ss_pred HHHHHHHcCCCchhCcCHHHHHH
Confidence 99999999999999999999986
No 331
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=6.1e-37 Score=313.94 Aligned_cols=251 Identities=23% Similarity=0.361 Sum_probs=198.7
Q ss_pred CCceEEEEEEeecCceEEEEEEEC-----CCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCc
Q 007541 22 GSRYKIEEVIGKGSYGVVCSAYDT-----RTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSR 96 (599)
Q Consensus 22 ~~rY~i~~~LG~G~~g~V~~a~d~-----~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~ 96 (599)
..+|++.++||+|+||.||++... .++..+|+|.+... .......+.+|+.+++.++|+||+++++++...
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-- 79 (280)
T cd05092 4 RRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA--SESARQDFQREAELLTVLQHQHIVRFYGVCTEG-- 79 (280)
T ss_pred hHhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcC--CHHHHHHHHHHHHHHhcCCCCCCceEEEEEecC--
Confidence 467899999999999999999743 35678999988642 233456788999999999999999999988443
Q ss_pred CCCccEEEEEecCC-cCHHHHHHhCC---------------CCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeC
Q 007541 97 REFKDIYVVFELME-SDLHQVIKAND---------------DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILAN 160 (599)
Q Consensus 97 ~~~~~iylV~E~~~-g~L~~~i~~~~---------------~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~ 160 (599)
...|+||||+. ++|.+++...+ .+++..+..++.||+.||+|||++||+||||||+|||++
T Consensus 80 ---~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~~ 156 (280)
T cd05092 80 ---RPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCLVG 156 (280)
T ss_pred ---CceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhEEEc
Confidence 46899999998 69999987643 478999999999999999999999999999999999999
Q ss_pred CCCceeeeccCccccccCCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHh-CCCCCCCCChhhH
Q 007541 161 ADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQ 239 (599)
Q Consensus 161 ~~~~lKL~DFGlA~~~~~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLlt-G~~pF~g~~~~~~ 239 (599)
.++.+||+|||+++....... ........++..|+|||.+.+ ..++.++|||||||++++|++ |.+||......+.
T Consensus 157 ~~~~~kL~dfg~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~ 233 (280)
T cd05092 157 QGLVVKIGDFGMSRDIYSTDY-YRVGGRTMLPIRWMPPESILY--RKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEA 233 (280)
T ss_pred CCCCEEECCCCceeEcCCCce-eecCCCccccccccCHHHhcc--CCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHH
Confidence 999999999999975432211 111123345678999998876 578999999999999999998 9999976554433
Q ss_pred HHHHHHhcCCCCHHHHHHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCC
Q 007541 240 LDIMTDLLGTPSPEAIARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIP 319 (599)
Q Consensus 240 l~~I~~~lG~p~~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (599)
+..+... ...
T Consensus 234 ~~~~~~~---------------------------------------------------------------------~~~- 243 (280)
T cd05092 234 IECITQG---------------------------------------------------------------------REL- 243 (280)
T ss_pred HHHHHcC---------------------------------------------------------------------ccC-
Confidence 2222110 000
Q ss_pred CCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 007541 320 FSQKFPNANPLALRLLERMLAFEPKDRPTAEEALA 354 (599)
Q Consensus 320 ~~~~~~~~s~~a~dLL~~mL~~DP~~RpTa~e~L~ 354 (599)
......++.+.+||.+||+.||.+|||++|+++
T Consensus 244 --~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~ 276 (280)
T cd05092 244 --ERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHS 276 (280)
T ss_pred --CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 111246778999999999999999999999975
No 332
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=4.3e-37 Score=325.27 Aligned_cols=206 Identities=28% Similarity=0.492 Sum_probs=167.5
Q ss_pred CCceEEEEEEeecCceEEEEEEE-----CCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhc-CCCCccccceeecCCC
Q 007541 22 GSRYKIEEVIGKGSYGVVCSAYD-----TRTGEKVAIKKINDIFEHVSDATRILREIKLLRLL-RHPDIVEIKHILLPPS 95 (599)
Q Consensus 22 ~~rY~i~~~LG~G~~g~V~~a~d-----~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l-~HpnIv~l~~v~~~~s 95 (599)
.++|++.+.||+|+||+||+|.+ ..+++.||||+++... .......+.+|+.+|..+ +|+||+++++++...
T Consensus 6 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~- 83 (343)
T cd05103 6 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA-THSEHRALMSELKILIHIGHHLNVVNLLGACTKP- 83 (343)
T ss_pred hhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCC-ChHHHHHHHHHHHHHHhccCCccHhhhcceeecC-
Confidence 46899999999999999999985 3567899999986432 223445788999999999 589999999987433
Q ss_pred cCCCccEEEEEecCC-cCHHHHHHhCC-----------------------------------------------------
Q 007541 96 RREFKDIYVVFELME-SDLHQVIKAND----------------------------------------------------- 121 (599)
Q Consensus 96 ~~~~~~iylV~E~~~-g~L~~~i~~~~----------------------------------------------------- 121 (599)
...+|+||||++ ++|.+++....
T Consensus 84 ---~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (343)
T cd05103 84 ---GGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSD 160 (343)
T ss_pred ---CCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCcccc
Confidence 246899999999 69999886431
Q ss_pred --------------CCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCCCCCccccc
Q 007541 122 --------------DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWT 187 (599)
Q Consensus 122 --------------~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~~~~~~~t 187 (599)
.++...+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++....... .....
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~-~~~~~ 239 (343)
T cd05103 161 VEEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPD-YVRKG 239 (343)
T ss_pred chhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEcCCCcEEEEecccccccccCcc-hhhcC
Confidence 357778889999999999999999999999999999999999999999999976432211 11112
Q ss_pred ccccCccccCccccccccCCCCcchhhHhHHHHHHHHHh-CCCCCCCCC
Q 007541 188 DYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKN 235 (599)
Q Consensus 188 ~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLlt-G~~pF~g~~ 235 (599)
...++..|+|||.+.+ ..++.++|||||||++++|++ |..||.+..
T Consensus 240 ~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~~l~el~~~g~~p~~~~~ 286 (343)
T cd05103 240 DARLPLKWMAPETIFD--RVYTIQSDVWSFGVLLWEIFSLGASPYPGVK 286 (343)
T ss_pred CCCCCcceECcHHhcC--CCCCchhhHHHHHHHHHHHHHCCCCCCCCcc
Confidence 2345667999999876 678999999999999999996 999997643
No 333
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.1e-39 Score=366.47 Aligned_cols=265 Identities=29% Similarity=0.390 Sum_probs=216.9
Q ss_pred CCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCcc
Q 007541 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKD 101 (599)
Q Consensus 22 ~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~ 101 (599)
.-|++-...||.|.||.||.|.+..||+..|+|-|+-..........+.+|..+|..|+|||+|+.++|=.+. ..
T Consensus 1234 ~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHR-----ek 1308 (1509)
T KOG4645|consen 1234 TFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHR-----EK 1308 (1509)
T ss_pred eeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecH-----HH
Confidence 4577888999999999999999999999999998874433444556788999999999999999999986543 35
Q ss_pred EEEEEecCC-cCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCCC
Q 007541 102 IYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT 180 (599)
Q Consensus 102 iylV~E~~~-g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~ 180 (599)
+||.||||+ |+|.+++...+..+|...+.|..|++.||.|||+.|||||||||.|||++.+|.+|++|||.|....+..
T Consensus 1309 v~IFMEyC~~GsLa~ll~~gri~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~ 1388 (1509)
T KOG4645|consen 1309 VYIFMEYCEGGSLASLLEHGRIEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNA 1388 (1509)
T ss_pred HHHHHHHhccCcHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceeeecCCcEEeecccceeEecCch
Confidence 899999999 6999999887778899999999999999999999999999999999999999999999999999876553
Q ss_pred -CCcccccccccCccccCcccccccc-CCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHH
Q 007541 181 -PTAIFWTDYVATRWYRAPELCGSFF-SKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARV 258 (599)
Q Consensus 181 -~~~~~~t~~~gt~~Y~APE~l~~~~-~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~ 258 (599)
.-...+.+++||+-|||||++.+.. .+-..+.|||||||++.||+||+-||..-+..=+ .|..
T Consensus 1389 ~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~a--IMy~------------- 1453 (1509)
T KOG4645|consen 1389 QTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWA--IMYH------------- 1453 (1509)
T ss_pred hcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhH--HHhH-------------
Confidence 2223356789999999999986632 4466799999999999999999999865432211 1111
Q ss_pred hhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHh
Q 007541 259 CLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERM 338 (599)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~m 338 (599)
-.+..+.+. ...++++..|||++|
T Consensus 1454 ---------------------------------------------------V~~gh~Pq~-----P~~ls~~g~dFle~C 1477 (1509)
T KOG4645|consen 1454 ---------------------------------------------------VAAGHKPQI-----PERLSSEGRDFLEHC 1477 (1509)
T ss_pred ---------------------------------------------------HhccCCCCC-----chhhhHhHHHHHHHH
Confidence 111111111 123789999999999
Q ss_pred cccCCCCCCCHHHHhcCccccCcc
Q 007541 339 LAFEPKDRPTAEEALADPYFKGLA 362 (599)
Q Consensus 339 L~~DP~~RpTa~e~L~HP~f~~~~ 362 (599)
|.-||++|+++.|+|+|-|-+.-.
T Consensus 1478 l~~dP~~Rw~~~qlle~~f~~~~~ 1501 (1509)
T KOG4645|consen 1478 LEQDPKMRWTASQLLEHAFGKSCT 1501 (1509)
T ss_pred HhcCchhhhHHHHHHHhhcccccc
Confidence 999999999999999998876543
No 334
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=1e-36 Score=312.29 Aligned_cols=205 Identities=25% Similarity=0.415 Sum_probs=169.2
Q ss_pred CCceEEEEEEeecCceEEEEEEECCCCc----EEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcC
Q 007541 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGE----KVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRR 97 (599)
Q Consensus 22 ~~rY~i~~~LG~G~~g~V~~a~d~~tg~----~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~ 97 (599)
.++|++++.||+|+||+||+|.+..+++ .|++|++... ........+..|+.+++.+.||||+++++++..
T Consensus 6 ~~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~---- 80 (279)
T cd05111 6 ETELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDR-SGRQTFQEITDHMLAMGSLDHAYIVRLLGICPG---- 80 (279)
T ss_pred HhhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccc-cchHHHHHHHHHHHHHhcCCCCCcceEEEEECC----
Confidence 4689999999999999999999988776 4777776432 122334567788889999999999999998732
Q ss_pred CCccEEEEEecCC-cCHHHHHHhC-CCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCcccc
Q 007541 98 EFKDIYVVFELME-SDLHQVIKAN-DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARV 175 (599)
Q Consensus 98 ~~~~iylV~E~~~-g~L~~~i~~~-~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~ 175 (599)
...++|+||+. ++|.+++... +.+++..+..++.||+.||.|||++|++||||||+|||++.++.+||+|||+++.
T Consensus 81 --~~~~~i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~ 158 (279)
T cd05111 81 --ASLQLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLKSDSIVQIADFGVADL 158 (279)
T ss_pred --CccEEEEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEEcCCcccee
Confidence 24789999998 7999999764 5789999999999999999999999999999999999999999999999999986
Q ss_pred ccCCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHh-CCCCCCCCCh
Q 007541 176 AFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNV 236 (599)
Q Consensus 176 ~~~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLlt-G~~pF~g~~~ 236 (599)
...... ....+...++..|+|||.+.+ ..++.++|||||||++|||++ |..||.+...
T Consensus 159 ~~~~~~-~~~~~~~~~~~~y~~pE~~~~--~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~ 217 (279)
T cd05111 159 LYPDDK-KYFYSEHKTPIKWMALESILF--GRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRP 217 (279)
T ss_pred ccCCCc-ccccCCCCCcccccCHHHhcc--CCcCchhhHHHHHHHHHHHHcCCCCCCCCCCH
Confidence 533221 111233456778999999876 578999999999999999998 9999987654
No 335
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=9.9e-37 Score=308.68 Aligned_cols=244 Identities=22% Similarity=0.339 Sum_probs=191.5
Q ss_pred EEeecCceEEEEEEEC--CCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEEEEEe
Q 007541 30 VIGKGSYGVVCSAYDT--RTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVVFE 107 (599)
Q Consensus 30 ~LG~G~~g~V~~a~d~--~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~iylV~E 107 (599)
.||+|+||.||+|.+. .++..||+|++.... .......+.+|+.+|+.++|+||+++++++.. ..+|+|||
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~-~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~------~~~~lv~e 74 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNEN-EKSVRDEMMREAEIMHQLDNPYIVRMIGVCEA------EALMLVME 74 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEccccc-ChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcC------CCeEEEEE
Confidence 3899999999999765 445679999886532 23344668899999999999999999998732 35899999
Q ss_pred cCC-cCHHHHHHh-CCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCCCCCccc
Q 007541 108 LME-SDLHQVIKA-NDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIF 185 (599)
Q Consensus 108 ~~~-g~L~~~i~~-~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~~~~~~ 185 (599)
|++ ++|.+++.. ...+++..+..++.||+.||.|||++|++||||||+|||++.++.+||+|||+++...........
T Consensus 75 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~ 154 (257)
T cd05115 75 MASGGPLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKA 154 (257)
T ss_pred eCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEEcCCCcEEeccCCccccccCCccceec
Confidence 998 699999875 457899999999999999999999999999999999999999999999999999764332221111
Q ss_pred ccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHh-CCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHhhhhhh
Q 007541 186 WTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVCLLLNI 264 (599)
Q Consensus 186 ~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLlt-G~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~~~~~~ 264 (599)
.+...++..|+|||.+.. ..++.++|||||||++|+|++ |..||.+....+....+..
T Consensus 155 ~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~------------------- 213 (257)
T cd05115 155 RSAGKWPLKWYAPECINF--RKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSFIEQ------------------- 213 (257)
T ss_pred cCCCCCCcccCCHHHHcc--CCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHC-------------------
Confidence 112233567999998865 578899999999999999996 9999977654333222211
Q ss_pred hhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHhcccCCC
Q 007541 265 IWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPK 344 (599)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL~~DP~ 344 (599)
.... ...+..++.+.+||.+||..||+
T Consensus 214 --------------------------------------------------~~~~---~~~~~~~~~l~~li~~c~~~~~~ 240 (257)
T cd05115 214 --------------------------------------------------GKRL---DCPAECPPEMYALMKDCWIYKWE 240 (257)
T ss_pred --------------------------------------------------CCCC---CCCCCCCHHHHHHHHHHcCCChh
Confidence 0000 11234678899999999999999
Q ss_pred CCCCHHHHhc
Q 007541 345 DRPTAEEALA 354 (599)
Q Consensus 345 ~RpTa~e~L~ 354 (599)
+||++.++++
T Consensus 241 ~Rp~~~~i~~ 250 (257)
T cd05115 241 DRPNFAKVEE 250 (257)
T ss_pred hCcCHHHHHH
Confidence 9999999875
No 336
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=1.3e-36 Score=309.11 Aligned_cols=251 Identities=24% Similarity=0.407 Sum_probs=200.7
Q ss_pred CCceEEEEEEeecCceEEEEEEECCC---CcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCC
Q 007541 22 GSRYKIEEVIGKGSYGVVCSAYDTRT---GEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRRE 98 (599)
Q Consensus 22 ~~rY~i~~~LG~G~~g~V~~a~d~~t---g~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~ 98 (599)
.++|.+.+.||+|+||.||+|.+..+ ...||||.+.... .....+.+.+|+.+++.+.|+||+++++++..
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~----- 78 (270)
T cd05056 5 REDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCT-SPSVREKFLQEAYIMRQFDHPHIVKLIGVITE----- 78 (270)
T ss_pred hhhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcC-CHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-----
Confidence 35699999999999999999987654 3569999876432 23445678899999999999999999998843
Q ss_pred CccEEEEEecCC-cCHHHHHHhCC-CCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccc
Q 007541 99 FKDIYVVFELME-SDLHQVIKAND-DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVA 176 (599)
Q Consensus 99 ~~~iylV~E~~~-g~L~~~i~~~~-~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~ 176 (599)
...|+||||+. ++|.+++.... .+++..+..++.||+.||+|||+.|++|+||||+|||++.++.+||+|||+++..
T Consensus 79 -~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~ 157 (270)
T cd05056 79 -NPVWIVMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLVSSPDCVKLGDFGLSRYL 157 (270)
T ss_pred -CCcEEEEEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEEecCCCeEEccCceeeec
Confidence 24689999998 69999998754 5899999999999999999999999999999999999999999999999999765
Q ss_pred cCCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHh-CCCCCCCCChhhHHHHHHHhcCCCCHHHH
Q 007541 177 FNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLLGTPSPEAI 255 (599)
Q Consensus 177 ~~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLlt-G~~pF~g~~~~~~l~~I~~~lG~p~~e~i 255 (599)
...... ..+...++..|+|||.+.. ..++.++|||||||++++|++ |..||.+.+..+.+..+...
T Consensus 158 ~~~~~~--~~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~--------- 224 (270)
T cd05056 158 EDESYY--KASKGKLPIKWMAPESINF--RRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRIENG--------- 224 (270)
T ss_pred ccccce--ecCCCCccccccChhhhcc--CCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcC---------
Confidence 332111 1122334567999998866 578999999999999999996 99999877654433322110
Q ss_pred HHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHH
Q 007541 256 ARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLL 335 (599)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL 335 (599)
... ...+..++.+.+||
T Consensus 225 ------------------------------------------------------------~~~---~~~~~~~~~~~~li 241 (270)
T cd05056 225 ------------------------------------------------------------ERL---PMPPNCPPTLYSLM 241 (270)
T ss_pred ------------------------------------------------------------CcC---CCCCCCCHHHHHHH
Confidence 000 11245678899999
Q ss_pred HHhcccCCCCCCCHHHHhcC
Q 007541 336 ERMLAFEPKDRPTAEEALAD 355 (599)
Q Consensus 336 ~~mL~~DP~~RpTa~e~L~H 355 (599)
.+||..||.+|||+.+++..
T Consensus 242 ~~~l~~~P~~Rpt~~~~~~~ 261 (270)
T cd05056 242 TKCWAYDPSKRPRFTELKAQ 261 (270)
T ss_pred HHHcCCChhhCcCHHHHHHH
Confidence 99999999999999999864
No 337
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=1.2e-36 Score=305.41 Aligned_cols=248 Identities=28% Similarity=0.479 Sum_probs=200.4
Q ss_pred eEEEEEEeecCceEEEEEEECCCC----cEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCc
Q 007541 25 YKIEEVIGKGSYGVVCSAYDTRTG----EKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFK 100 (599)
Q Consensus 25 Y~i~~~LG~G~~g~V~~a~d~~tg----~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~ 100 (599)
+++.+.||.|+||.||+|.+..++ ..||+|++..... ......+..|+.+|+.++|+||+++++++... .
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-----~ 74 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDAD-EQQIEEFLREARIMRKLDHPNIVKLLGVCTEE-----E 74 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCC-hHHHHHHHHHHHHHHhcCCCchheEEEEEcCC-----C
Confidence 357889999999999999998876 8999999864322 22566788999999999999999999998543 4
Q ss_pred cEEEEEecCC-cCHHHHHHhCCC--CCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCcccccc
Q 007541 101 DIYVVFELME-SDLHQVIKANDD--LTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAF 177 (599)
Q Consensus 101 ~iylV~E~~~-g~L~~~i~~~~~--lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~ 177 (599)
..|+||||+. ++|.+++..... +++..+..++.||+.||.|||+.|++|+||||+||+++.++.++|+|||+++...
T Consensus 75 ~~~~i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~ 154 (258)
T smart00219 75 PLMIVMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVGENLVVKISDFGLSRDLY 154 (258)
T ss_pred eeEEEEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEEccCCeEEEcccCCceecc
Confidence 7999999998 599999976554 9999999999999999999999999999999999999999999999999998654
Q ss_pred CCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHh-CCCCCCCCChhhHHHHHHHhcCCCCHHHHH
Q 007541 178 NDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLLGTPSPEAIA 256 (599)
Q Consensus 178 ~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLlt-G~~pF~g~~~~~~l~~I~~~lG~p~~e~i~ 256 (599)
...... .....++..|+|||.+.. ..++.++||||+||++++|++ |++||.+.+....+..+...
T Consensus 155 ~~~~~~--~~~~~~~~~y~~Pe~~~~--~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~---------- 220 (258)
T smart00219 155 DDDYYK--KKGGKLPIRWMAPESLKD--GKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEEVLEYLKKG---------- 220 (258)
T ss_pred cccccc--cccCCCcccccChHHhcc--CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcC----------
Confidence 331111 111236778999998865 678999999999999999998 88998775544433322110
Q ss_pred HHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHH
Q 007541 257 RVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLE 336 (599)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~ 336 (599)
... ......+..+.+++.
T Consensus 221 -----------------------------------------------------------~~~---~~~~~~~~~~~~~i~ 238 (258)
T smart00219 221 -----------------------------------------------------------YRL---PKPENCPPEIYKLML 238 (258)
T ss_pred -----------------------------------------------------------CCC---CCCCcCCHHHHHHHH
Confidence 000 111236788999999
Q ss_pred HhcccCCCCCCCHHHHhc
Q 007541 337 RMLAFEPKDRPTAEEALA 354 (599)
Q Consensus 337 ~mL~~DP~~RpTa~e~L~ 354 (599)
+||..||.+|||+.|+++
T Consensus 239 ~~l~~~p~~Rpt~~~ll~ 256 (258)
T smart00219 239 QCWAEDPEDRPTFSELVE 256 (258)
T ss_pred HHCcCChhhCcCHHHHHh
Confidence 999999999999999986
No 338
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=4.5e-37 Score=315.28 Aligned_cols=271 Identities=24% Similarity=0.377 Sum_probs=202.2
Q ss_pred CCceEEEEEEeecCceEEEEEEE----CCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcC
Q 007541 22 GSRYKIEEVIGKGSYGVVCSAYD----TRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRR 97 (599)
Q Consensus 22 ~~rY~i~~~LG~G~~g~V~~a~d----~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~ 97 (599)
..-|++++.||+|+||.||+|.. ..++..||+|.++... .......+.+|+.+|+.++|+||+++.+++...
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--- 78 (284)
T cd05079 3 KRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES-GGNHIADLKKEIEILRNLYHENIVKYKGICTED--- 78 (284)
T ss_pred hhhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccc-cHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecC---
Confidence 34578999999999999999974 5678999999986432 233456788999999999999999999988543
Q ss_pred CCccEEEEEecCC-cCHHHHHHhCC-CCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCcccc
Q 007541 98 EFKDIYVVFELME-SDLHQVIKAND-DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARV 175 (599)
Q Consensus 98 ~~~~iylV~E~~~-g~L~~~i~~~~-~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~ 175 (599)
+...+|+||||+. ++|.+++.... .+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.
T Consensus 79 ~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~ 158 (284)
T cd05079 79 GGNGIKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKA 158 (284)
T ss_pred CCCceEEEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEEcCCCCEEECCCccccc
Confidence 2246899999997 69999987653 689999999999999999999999999999999999999999999999999986
Q ss_pred ccCCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHH
Q 007541 176 AFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAI 255 (599)
Q Consensus 176 ~~~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i 255 (599)
...............++..|+|||.+.+ ..++.++|||||||++++|++++.++.... ....+..|....+.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~y~apE~~~~--~~~~~~~Di~slG~il~ellt~~~~~~~~~-----~~~~~~~~~~~~~~- 230 (284)
T cd05079 159 IETDKEYYTVKDDLDSPVFWYAPECLIQ--SKFYIASDVWSFGVTLYELLTYCDSESSPM-----TLFLKMIGPTHGQM- 230 (284)
T ss_pred cccCccceeecCCCCCCccccCHHHhcc--CCCCccccchhhhhhhhhhhcCCCCCcccc-----chhhhhcccccccc-
Confidence 5432221111233456778999998876 578899999999999999999876543211 11111111111100
Q ss_pred HHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHH
Q 007541 256 ARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLL 335 (599)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL 335 (599)
. ....+..+...... ......+..+.+||
T Consensus 231 ---------------------------------------------~---~~~~~~~~~~~~~~---~~~~~~~~~~~~li 259 (284)
T cd05079 231 ---------------------------------------------T---VTRLVRVLEEGKRL---PRPPNCPEEVYQLM 259 (284)
T ss_pred ---------------------------------------------c---HHHHHHHHHcCccC---CCCCCCCHHHHHHH
Confidence 0 00111111111111 12345788999999
Q ss_pred HHhcccCCCCCCCHHHHhcC
Q 007541 336 ERMLAFEPKDRPTAEEALAD 355 (599)
Q Consensus 336 ~~mL~~DP~~RpTa~e~L~H 355 (599)
.+||+.||.+|||+.++|++
T Consensus 260 ~~~l~~~p~~Rpt~~~il~~ 279 (284)
T cd05079 260 RKCWEFQPSKRTTFQNLIEG 279 (284)
T ss_pred HHHccCCcccCcCHHHHHHH
Confidence 99999999999999999874
No 339
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=1.6e-36 Score=305.51 Aligned_cols=249 Identities=26% Similarity=0.423 Sum_probs=198.5
Q ss_pred CCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCcc
Q 007541 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKD 101 (599)
Q Consensus 22 ~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~ 101 (599)
..+|++.+.||+|+||.||+|.+. ++..+|+|++.... .....+.+|+.+++.++||||+++++++.. ...
T Consensus 3 ~~~~~~~~~ig~g~~g~v~~~~~~-~~~~~~~k~~~~~~---~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-----~~~ 73 (256)
T cd05112 3 PSELTLVQEIGSGQFGLVWLGYWL-EKRKVAIKTIREGA---MSEEDFIEEAQVMMKLSHPKLVQLYGVCTE-----RSP 73 (256)
T ss_pred hhHeEEEeeecCcccceEEEEEEe-CCCeEEEEECCCCC---CCHHHHHHHHHHHHhCCCCCeeeEEEEEcc-----CCc
Confidence 458999999999999999999875 46789999886432 223467789999999999999999999843 347
Q ss_pred EEEEEecCC-cCHHHHHHhC-CCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCC
Q 007541 102 IYVVFELME-SDLHQVIKAN-DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFND 179 (599)
Q Consensus 102 iylV~E~~~-g~L~~~i~~~-~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~ 179 (599)
+|+||||+. ++|.+++... +.++++.++.++.||+.+|.|||+.|++|+||||+||+++.++.+||+|||+++.....
T Consensus 74 ~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~ 153 (256)
T cd05112 74 ICLVFEFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDD 153 (256)
T ss_pred eEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEEcCCCeEEECCCcceeecccC
Confidence 899999998 5899988764 46899999999999999999999999999999999999999999999999999765332
Q ss_pred CCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHh-CCCCCCCCChhhHHHHHHHhcCCCCHHHHHHH
Q 007541 180 TPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLLGTPSPEAIARV 258 (599)
Q Consensus 180 ~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLlt-G~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~ 258 (599)
.... .....++..|+|||.+.+ ..++.++||||+||++|+|++ |..||...+....+..+.+.
T Consensus 154 ~~~~--~~~~~~~~~~~aPe~~~~--~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~------------ 217 (256)
T cd05112 154 QYTS--STGTKFPVKWSSPEVFSF--SKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETINAG------------ 217 (256)
T ss_pred cccc--cCCCccchhhcCHhHhcc--CCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHhCC------------
Confidence 1111 122335668999998876 578899999999999999998 99999766544333222110
Q ss_pred hhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHh
Q 007541 259 CLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERM 338 (599)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~m 338 (599)
.... .....+..+.+|+.+|
T Consensus 218 ---------------------------------------------------------~~~~---~~~~~~~~~~~l~~~~ 237 (256)
T cd05112 218 ---------------------------------------------------------FRLY---KPRLASQSVYELMQHC 237 (256)
T ss_pred ---------------------------------------------------------CCCC---CCCCCCHHHHHHHHHH
Confidence 0000 0012467899999999
Q ss_pred cccCCCCCCCHHHHhcC
Q 007541 339 LAFEPKDRPTAEEALAD 355 (599)
Q Consensus 339 L~~DP~~RpTa~e~L~H 355 (599)
|..||++|||+.|+|++
T Consensus 238 l~~~p~~Rp~~~~~l~~ 254 (256)
T cd05112 238 WKERPEDRPSFSLLLHQ 254 (256)
T ss_pred cccChhhCCCHHHHHHh
Confidence 99999999999999864
No 340
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=8.7e-37 Score=314.12 Aligned_cols=250 Identities=24% Similarity=0.395 Sum_probs=195.8
Q ss_pred ceEEEEEEeecCceEEEEEEECC-----CCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCC
Q 007541 24 RYKIEEVIGKGSYGVVCSAYDTR-----TGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRRE 98 (599)
Q Consensus 24 rY~i~~~LG~G~~g~V~~a~d~~-----tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~ 98 (599)
+|++.+.||+|+||+||+|.+.. ....+|+|.+.... .......+.+|+.+|+.++||||+++++.+..
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~----- 74 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENA-SSSELRDLLSEFNLLKQVNHPHVIKLYGACSQ----- 74 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCC-CHHHHHHHHHHHHHHhhCCCCCEeeEEEEEec-----
Confidence 58899999999999999998754 23578998886432 22345678899999999999999999998843
Q ss_pred CccEEEEEecCC-cCHHHHHHhC------------------------CCCCHHHHHHHHHHHHhhhhhcccCceEeecCC
Q 007541 99 FKDIYVVFELME-SDLHQVIKAN------------------------DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLK 153 (599)
Q Consensus 99 ~~~iylV~E~~~-g~L~~~i~~~------------------------~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLK 153 (599)
....|+|+||+. ++|.+++... ..+++..+..++.||+.||.|||++||+|||||
T Consensus 75 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dik 154 (290)
T cd05045 75 DGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLA 154 (290)
T ss_pred CCCcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeehhhhh
Confidence 346899999999 6899988642 247788999999999999999999999999999
Q ss_pred CCcEEeCCCCceeeeccCccccccCCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHh-CCCCCC
Q 007541 154 PKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFP 232 (599)
Q Consensus 154 P~NILv~~~~~lKL~DFGlA~~~~~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLlt-G~~pF~ 232 (599)
|+|||++.++.+||+|||+++......... ......++..|+|||.+.+ ..++.++|||||||++++|++ |..||.
T Consensus 155 p~nill~~~~~~kl~dfg~~~~~~~~~~~~-~~~~~~~~~~y~apE~~~~--~~~~~~~Di~slG~~l~el~t~g~~p~~ 231 (290)
T cd05045 155 ARNVLVAEGRKMKISDFGLSRDVYEEDSYV-KRSKGRIPVKWMAIESLFD--HIYTTQSDVWSFGVLLWEIVTLGGNPYP 231 (290)
T ss_pred hheEEEcCCCcEEeccccccccccCccchh-cccCCCCCccccCHHHHcc--CCcchHhHHHHHHHHHHHHHhcCCCCCC
Confidence 999999999999999999997653222110 1122245678999998866 678999999999999999998 999998
Q ss_pred CCChhhHHHHHHHhcCCCCHHHHHHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhc
Q 007541 233 GKNVVHQLDIMTDLLGTPSPEAIARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSM 312 (599)
Q Consensus 233 g~~~~~~l~~I~~~lG~p~~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (599)
+.......+.+....
T Consensus 232 ~~~~~~~~~~~~~~~----------------------------------------------------------------- 246 (290)
T cd05045 232 GIAPERLFNLLKTGY----------------------------------------------------------------- 246 (290)
T ss_pred CCCHHHHHHHHhCCC-----------------------------------------------------------------
Confidence 765433222111000
Q ss_pred ccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 007541 313 RKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALA 354 (599)
Q Consensus 313 ~~~~~~~~~~~~~~~s~~a~dLL~~mL~~DP~~RpTa~e~L~ 354 (599)
.. ......+..+.+||.+||+.||.+|||+.|+++
T Consensus 247 ----~~---~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~ 281 (290)
T cd05045 247 ----RM---ERPENCSEEMYNLMLTCWKQEPDKRPTFADISK 281 (290)
T ss_pred ----CC---CCCCCCCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence 00 011245678999999999999999999999986
No 341
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.2e-36 Score=320.13 Aligned_cols=252 Identities=26% Similarity=0.419 Sum_probs=198.5
Q ss_pred CceEEEEEEeecCceEEEEEEECCC-------CcEEEEEEecCcccChhhHHHHHHHHHHHHhc-CCCCccccceeecCC
Q 007541 23 SRYKIEEVIGKGSYGVVCSAYDTRT-------GEKVAIKKINDIFEHVSDATRILREIKLLRLL-RHPDIVEIKHILLPP 94 (599)
Q Consensus 23 ~rY~i~~~LG~G~~g~V~~a~d~~t-------g~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l-~HpnIv~l~~v~~~~ 94 (599)
.+|++++.||+|+||.||+|++... +..||+|.++.. ........+.+|+.+++.+ +|+||+++++++..
T Consensus 12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~- 89 (334)
T cd05100 12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDD-ATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ- 89 (334)
T ss_pred hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccc-cCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEcc-
Confidence 5799999999999999999987542 236999987642 2233456788999999999 79999999999843
Q ss_pred CcCCCccEEEEEecCC-cCHHHHHHhCC----------------CCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcE
Q 007541 95 SRREFKDIYVVFELME-SDLHQVIKAND----------------DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNI 157 (599)
Q Consensus 95 s~~~~~~iylV~E~~~-g~L~~~i~~~~----------------~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NI 157 (599)
...+|+|+||+. ++|.+++.... .++...+..++.||+.||.|||++||+||||||+||
T Consensus 90 ----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Ni 165 (334)
T cd05100 90 ----DGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAARNV 165 (334)
T ss_pred ----CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceE
Confidence 346899999998 69999987532 367788899999999999999999999999999999
Q ss_pred EeCCCCceeeeccCccccccCCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHh-CCCCCCCCCh
Q 007541 158 LANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNV 236 (599)
Q Consensus 158 Lv~~~~~lKL~DFGlA~~~~~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLlt-G~~pF~g~~~ 236 (599)
|++.++.+||+|||+++......... ......++..|+|||++.+ ..++.++|||||||++++|++ |..+|.+.+.
T Consensus 166 ll~~~~~~kL~Dfg~~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~el~~~g~~p~~~~~~ 242 (334)
T cd05100 166 LVTEDNVMKIADFGLARDVHNIDYYK-KTTNGRLPVKWMAPEALFD--RVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPV 242 (334)
T ss_pred EEcCCCcEEECCcccceecccccccc-cccCCCcCceEcCHHHhcc--CCcCchhhhHHHHHHHHHHHhcCCCCCCCCCH
Confidence 99999999999999997653321111 1122234567999999876 678999999999999999998 8899987665
Q ss_pred hhHHHHHHHhcCCCCHHHHHHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCC
Q 007541 237 VHQLDIMTDLLGTPSPEAIARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKK 316 (599)
Q Consensus 237 ~~~l~~I~~~lG~p~~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (599)
.+....+... .
T Consensus 243 ~~~~~~~~~~---------------------------------------------------------------------~ 253 (334)
T cd05100 243 EELFKLLKEG---------------------------------------------------------------------H 253 (334)
T ss_pred HHHHHHHHcC---------------------------------------------------------------------C
Confidence 4433222110 0
Q ss_pred CCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 007541 317 PIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALAD 355 (599)
Q Consensus 317 ~~~~~~~~~~~s~~a~dLL~~mL~~DP~~RpTa~e~L~H 355 (599)
. .......+..+.+||.+||+.+|.+|||+.|+|++
T Consensus 254 ~---~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~ 289 (334)
T cd05100 254 R---MDKPANCTHELYMIMRECWHAVPSQRPTFKQLVED 289 (334)
T ss_pred C---CCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence 0 01123456789999999999999999999999986
No 342
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=2.5e-36 Score=305.59 Aligned_cols=248 Identities=26% Similarity=0.402 Sum_probs=198.5
Q ss_pred CCCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCc
Q 007541 21 EGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFK 100 (599)
Q Consensus 21 ~~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~ 100 (599)
..++|++.+.||+|+||.||++.+. .+..||+|.+... ......+.+|+.+|+.++|+||+++.+++.. .
T Consensus 4 ~~~~~~~~~~lg~g~~~~vy~~~~~-~~~~~~iK~~~~~---~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~------~ 73 (260)
T cd05073 4 PRESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPG---SMSVEAFLAEANVMKTLQHDKLVKLHAVVTK------E 73 (260)
T ss_pred cccceeEEeEecCccceEEEEEEec-CCccEEEEecCCC---hhHHHHHHHHHHHHHhcCCCCcceEEEEEcC------C
Confidence 3579999999999999999999754 4567999988642 2234678899999999999999999988843 3
Q ss_pred cEEEEEecCC-cCHHHHHHhC--CCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCcccccc
Q 007541 101 DIYVVFELME-SDLHQVIKAN--DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAF 177 (599)
Q Consensus 101 ~iylV~E~~~-g~L~~~i~~~--~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~ 177 (599)
..|+||||++ ++|.+++... ..++...+..++.||+.||.|||+.|++|+||||+||+++.++.+||+|||++....
T Consensus 74 ~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~ 153 (260)
T cd05073 74 PIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIE 153 (260)
T ss_pred CeEEEEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCCcceeecc
Confidence 6899999998 6999999763 357888999999999999999999999999999999999999999999999997653
Q ss_pred CCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHh-CCCCCCCCChhhHHHHHHHhcCCCCHHHHH
Q 007541 178 NDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLLGTPSPEAIA 256 (599)
Q Consensus 178 ~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLlt-G~~pF~g~~~~~~l~~I~~~lG~p~~e~i~ 256 (599)
..... ......++..|+|||++.. ..++.++|||||||++++|++ |+.||.+.+..+....+....
T Consensus 154 ~~~~~--~~~~~~~~~~y~~PE~~~~--~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~--------- 220 (260)
T cd05073 154 DNEYT--AREGAKFPIKWTAPEAINF--GSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGY--------- 220 (260)
T ss_pred CCCcc--cccCCcccccccCHhHhcc--CCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCCC---------
Confidence 22111 1122345677999999876 578899999999999999998 999998766443332221100
Q ss_pred HHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHH
Q 007541 257 RVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLE 336 (599)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~ 336 (599)
. .......+..+.+++.
T Consensus 221 ------------------------------------------------------------~---~~~~~~~~~~~~~~i~ 237 (260)
T cd05073 221 ------------------------------------------------------------R---MPRPENCPEELYNIMM 237 (260)
T ss_pred ------------------------------------------------------------C---CCCcccCCHHHHHHHH
Confidence 0 0112346778999999
Q ss_pred HhcccCCCCCCCHHHHhc
Q 007541 337 RMLAFEPKDRPTAEEALA 354 (599)
Q Consensus 337 ~mL~~DP~~RpTa~e~L~ 354 (599)
+||+.||++||++.++++
T Consensus 238 ~~l~~~p~~Rp~~~~l~~ 255 (260)
T cd05073 238 RCWKNRPEERPTFEYIQS 255 (260)
T ss_pred HHcccCcccCcCHHHHHH
Confidence 999999999999998864
No 343
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=1.7e-36 Score=309.84 Aligned_cols=254 Identities=21% Similarity=0.355 Sum_probs=201.3
Q ss_pred CCCceEEEEEEeecCceEEEEEEECC----CCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCc
Q 007541 21 EGSRYKIEEVIGKGSYGVVCSAYDTR----TGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSR 96 (599)
Q Consensus 21 ~~~rY~i~~~LG~G~~g~V~~a~d~~----tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~ 96 (599)
..++|++.++||+|+||+||+|.+.. ++..|++|++... ........+.+|+.+|+.++|+||+++++++...
T Consensus 4 ~~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~-~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~-- 80 (280)
T cd05043 4 SRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDH-ASEIQVTLLLQESCLLYGLSHQNILPILHVCIED-- 80 (280)
T ss_pred chhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCC-CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecC--
Confidence 35789999999999999999999876 3688999988642 2334566788999999999999999999987543
Q ss_pred CCCccEEEEEecCC-cCHHHHHHhC--------CCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceee
Q 007541 97 REFKDIYVVFELME-SDLHQVIKAN--------DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKI 167 (599)
Q Consensus 97 ~~~~~iylV~E~~~-g~L~~~i~~~--------~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL 167 (599)
....++++||+. ++|.+++... ..+++..+..++.||+.||.|||++|++||||||+|||++.++.+||
T Consensus 81 --~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~~~~~~~kl 158 (280)
T cd05043 81 --GEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVIDEELQVKI 158 (280)
T ss_pred --CCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEEcCCCcEEE
Confidence 246799999998 6999998653 35889999999999999999999999999999999999999999999
Q ss_pred eccCccccccCCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHh-CCCCCCCCChhhHHHHHHHh
Q 007541 168 CDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDL 246 (599)
Q Consensus 168 ~DFGlA~~~~~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLlt-G~~pF~g~~~~~~l~~I~~~ 246 (599)
+|||+++......... ......++..|+|||.+.. ..++.++|||||||++++|++ |+.||.+.+..+....+..
T Consensus 159 ~d~g~~~~~~~~~~~~-~~~~~~~~~~y~apE~~~~--~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~- 234 (280)
T cd05043 159 TDNALSRDLFPMDYHC-LGDNENRPVKWMALESLVN--KEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFEMAAYLKD- 234 (280)
T ss_pred CCCCCcccccCCceEE-eCCCCCcchhccCHHHHhc--CCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHHHHHHHHc-
Confidence 9999998653322110 1122345677999999876 578999999999999999998 9999976554332211110
Q ss_pred cCCCCHHHHHHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCC
Q 007541 247 LGTPSPEAIARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPN 326 (599)
Q Consensus 247 lG~p~~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (599)
.... .....
T Consensus 235 --------------------------------------------------------------------~~~~---~~~~~ 243 (280)
T cd05043 235 --------------------------------------------------------------------GYRL---AQPIN 243 (280)
T ss_pred --------------------------------------------------------------------CCCC---CCCCc
Confidence 0000 01123
Q ss_pred CCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 007541 327 ANPLALRLLERMLAFEPKDRPTAEEALA 354 (599)
Q Consensus 327 ~s~~a~dLL~~mL~~DP~~RpTa~e~L~ 354 (599)
.++.+.+++.+||..||++|||+.|+++
T Consensus 244 ~~~~~~~li~~~l~~~p~~Rps~~~~~~ 271 (280)
T cd05043 244 CPDELFAVMACCWALDPEERPSFSQLVQ 271 (280)
T ss_pred CCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 5678999999999999999999999986
No 344
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=1.5e-36 Score=311.88 Aligned_cols=252 Identities=22% Similarity=0.320 Sum_probs=198.0
Q ss_pred CCceEEEEEEeecCceEEEEEEECC-----CCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCc
Q 007541 22 GSRYKIEEVIGKGSYGVVCSAYDTR-----TGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSR 96 (599)
Q Consensus 22 ~~rY~i~~~LG~G~~g~V~~a~d~~-----tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~ 96 (599)
.++|++.+.||+|+||.||+|.+.. ++..||||++.... .......+.+|+.+++.++||||+++++++..
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~--- 79 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA-SADMQADFQREAALMAEFDHPNIVKLLGVCAV--- 79 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCc-CHHHHHHHHHHHHHHHhcCCCchheEEEEEcC---
Confidence 4679999999999999999998753 67899999986432 22334568899999999999999999998843
Q ss_pred CCCccEEEEEecCC-cCHHHHHHhCC----------------------CCCHHHHHHHHHHHHhhhhhcccCceEeecCC
Q 007541 97 REFKDIYVVFELME-SDLHQVIKAND----------------------DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLK 153 (599)
Q Consensus 97 ~~~~~iylV~E~~~-g~L~~~i~~~~----------------------~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLK 153 (599)
...+|+||||+. ++|.+++.... .+++..+..++.||+.||.|||++|++|||||
T Consensus 80 --~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~ 157 (288)
T cd05050 80 --GKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLA 157 (288)
T ss_pred --CCccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCeeccccc
Confidence 346899999999 69999997431 36788899999999999999999999999999
Q ss_pred CCcEEeCCCCceeeeccCccccccCCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHh-CCCCCC
Q 007541 154 PKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFP 232 (599)
Q Consensus 154 P~NILv~~~~~lKL~DFGlA~~~~~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLlt-G~~pF~ 232 (599)
|+|||++.++.+||+|||+++......... .......+..|+|||.+.+ ..++.++|||||||++|+|++ |..||.
T Consensus 158 p~nil~~~~~~~~l~dfg~~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~--~~~~~~~Dv~slG~il~el~~~~~~p~~ 234 (288)
T cd05050 158 TRNCLVGENMVVKIADFGLSRNIYSADYYK-ASENDAIPIRWMPPESIFY--NRYTTESDVWAYGVVLWEIFSYGMQPYY 234 (288)
T ss_pred HhheEecCCCceEECccccceecccCcccc-ccCCCccChhhcCHHHHhc--CCCCchhHHHHHHHHHHHHHhCCCCCCC
Confidence 999999999999999999987543221110 1122344667999998876 678999999999999999997 888887
Q ss_pred CCChhhHHHHHHHhcCCCCHHHHHHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhc
Q 007541 233 GKNVVHQLDIMTDLLGTPSPEAIARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSM 312 (599)
Q Consensus 233 g~~~~~~l~~I~~~lG~p~~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (599)
+.+..+.+..+.+
T Consensus 235 ~~~~~~~~~~~~~------------------------------------------------------------------- 247 (288)
T cd05050 235 GMAHEEVIYYVRD------------------------------------------------------------------- 247 (288)
T ss_pred CCCHHHHHHHHhc-------------------------------------------------------------------
Confidence 6554332222210
Q ss_pred ccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 007541 313 RKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALA 354 (599)
Q Consensus 313 ~~~~~~~~~~~~~~~s~~a~dLL~~mL~~DP~~RpTa~e~L~ 354 (599)
... .......+..+.+||.+||+.||.+|||+.|+++
T Consensus 248 --~~~---~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~ 284 (288)
T cd05050 248 --GNV---LSCPDNCPLELYNLMRLCWSKLPSDRPSFASINR 284 (288)
T ss_pred --CCC---CCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence 000 0111245778999999999999999999999875
No 345
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=2.5e-36 Score=308.76 Aligned_cols=252 Identities=24% Similarity=0.372 Sum_probs=201.1
Q ss_pred CCCceEEEEEEeecCceEEEEEEECCCCc----EEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCc
Q 007541 21 EGSRYKIEEVIGKGSYGVVCSAYDTRTGE----KVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSR 96 (599)
Q Consensus 21 ~~~rY~i~~~LG~G~~g~V~~a~d~~tg~----~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~ 96 (599)
...+|++++.||+|+||+||+|.++.+|+ .||+|.+.... .......+.+|+.+|+.++|+||+++++++..
T Consensus 5 ~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--- 80 (279)
T cd05057 5 KETELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREET-SPKANKEILDEAYVMASVDHPHVVRLLGICLS--- 80 (279)
T ss_pred CHHHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCC-CHHHHHHHHHHHHHHHhCCCCCcceEEEEEec---
Confidence 45789999999999999999999877765 58999876432 23345678899999999999999999999854
Q ss_pred CCCccEEEEEecCC-cCHHHHHHhC-CCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccc
Q 007541 97 REFKDIYVVFELME-SDLHQVIKAN-DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLAR 174 (599)
Q Consensus 97 ~~~~~iylV~E~~~-g~L~~~i~~~-~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~ 174 (599)
..+++||||+. ++|.+++..+ ..+++..+..++.||+.||+|||+.||+||||||+|||++.++.+||+|||+++
T Consensus 81 ---~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~~~~~~~kL~dfg~~~ 157 (279)
T cd05057 81 ---SQVQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLVKTPQHVKITDFGLAK 157 (279)
T ss_pred ---CceEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEEcCCCeEEECCCcccc
Confidence 36899999998 6999998874 468999999999999999999999999999999999999999999999999998
Q ss_pred cccCCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHh-CCCCCCCCChhhHHHHHHHhcCCCCHH
Q 007541 175 VAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLLGTPSPE 253 (599)
Q Consensus 175 ~~~~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLlt-G~~pF~g~~~~~~l~~I~~~lG~p~~e 253 (599)
........ .......++..|+|||.+.. ..++.++|+||+||++++|++ |+.||.+....+....+..
T Consensus 158 ~~~~~~~~-~~~~~~~~~~~y~~PE~~~~--~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~-------- 226 (279)
T cd05057 158 LLDVDEKE-YHAEGGKVPIKWMALESILH--RIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEIPDLLEK-------- 226 (279)
T ss_pred cccCcccc-eecCCCcccccccCHHHhhc--CCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhC--------
Confidence 65422211 11111223567999998865 578899999999999999998 9999987654333222211
Q ss_pred HHHHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHH
Q 007541 254 AIARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALR 333 (599)
Q Consensus 254 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~d 333 (599)
.... ......+..+.+
T Consensus 227 -------------------------------------------------------------~~~~---~~~~~~~~~~~~ 242 (279)
T cd05057 227 -------------------------------------------------------------GERL---PQPPICTIDVYM 242 (279)
T ss_pred -------------------------------------------------------------CCCC---CCCCCCCHHHHH
Confidence 0000 011235677899
Q ss_pred HHHHhcccCCCCCCCHHHHhc
Q 007541 334 LLERMLAFEPKDRPTAEEALA 354 (599)
Q Consensus 334 LL~~mL~~DP~~RpTa~e~L~ 354 (599)
+|.+||..||.+|||+.++++
T Consensus 243 ~~~~~l~~~p~~Rp~~~~l~~ 263 (279)
T cd05057 243 VLVKCWMIDAESRPTFKELIN 263 (279)
T ss_pred HHHHHcCCChhhCCCHHHHHH
Confidence 999999999999999999976
No 346
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=1.4e-36 Score=309.37 Aligned_cols=242 Identities=25% Similarity=0.396 Sum_probs=189.9
Q ss_pred EEEeecCceEEEEEEECCCCc--EEEEEEecCcccChhhHHHHHHHHHHHHhc-CCCCccccceeecCCCcCCCccEEEE
Q 007541 29 EVIGKGSYGVVCSAYDTRTGE--KVAIKKINDIFEHVSDATRILREIKLLRLL-RHPDIVEIKHILLPPSRREFKDIYVV 105 (599)
Q Consensus 29 ~~LG~G~~g~V~~a~d~~tg~--~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l-~HpnIv~l~~v~~~~s~~~~~~iylV 105 (599)
+.||+|+||.||+|.++.++. .+|+|.++.. ........+.+|+.++..+ +||||+++++++... ..+|+|
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~-----~~~~lv 74 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY-ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHR-----GYLYLA 74 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEcccc-CCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecC-----CCceEE
Confidence 368999999999999988876 4688887632 2223456788999999999 799999999998433 468999
Q ss_pred EecCC-cCHHHHHHhCC----------------CCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeee
Q 007541 106 FELME-SDLHQVIKAND----------------DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKIC 168 (599)
Q Consensus 106 ~E~~~-g~L~~~i~~~~----------------~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~ 168 (599)
|||+. ++|.+++..+. .+++..+..++.||+.||+|||+.|++||||||+|||++.++.+||+
T Consensus 75 ~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili~~~~~~kl~ 154 (270)
T cd05047 75 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIA 154 (270)
T ss_pred EEeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEEcCCCeEEEC
Confidence 99998 69999997542 47889999999999999999999999999999999999999999999
Q ss_pred ccCccccccCCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHh-CCCCCCCCChhhHHHHHHHhc
Q 007541 169 DFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLL 247 (599)
Q Consensus 169 DFGlA~~~~~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLlt-G~~pF~g~~~~~~l~~I~~~l 247 (599)
|||+++....... ......+..|+|||++.. ..++.++|||||||++++|++ |..||.+.+..+....+..
T Consensus 155 dfgl~~~~~~~~~----~~~~~~~~~y~apE~~~~--~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~-- 226 (270)
T cd05047 155 DFGLSRGQEVYVK----KTMGRLPVRWMAIESLNY--SVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQ-- 226 (270)
T ss_pred CCCCccccchhhh----ccCCCCccccCChHHHcc--CCCCchhhHHHHHHHHHHHHcCCCCCccccCHHHHHHHHhC--
Confidence 9999864221110 111233567999999876 678999999999999999997 9999977554332222110
Q ss_pred CCCCHHHHHHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCC
Q 007541 248 GTPSPEAIARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNA 327 (599)
Q Consensus 248 G~p~~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (599)
.... ......
T Consensus 227 -------------------------------------------------------------------~~~~---~~~~~~ 236 (270)
T cd05047 227 -------------------------------------------------------------------GYRL---EKPLNC 236 (270)
T ss_pred -------------------------------------------------------------------CCCC---CCCCcC
Confidence 0000 111245
Q ss_pred CHHHHHHHHHhcccCCCCCCCHHHHhc
Q 007541 328 NPLALRLLERMLAFEPKDRPTAEEALA 354 (599)
Q Consensus 328 s~~a~dLL~~mL~~DP~~RpTa~e~L~ 354 (599)
+..+.+|+.+||..||.+|||+.|+|+
T Consensus 237 ~~~~~~li~~~l~~~p~~Rps~~~il~ 263 (270)
T cd05047 237 DDEVYDLMRQCWREKPYERPSFAQILV 263 (270)
T ss_pred CHHHHHHHHHHcccChhhCCCHHHHHH
Confidence 678999999999999999999999986
No 347
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=9.6e-37 Score=309.54 Aligned_cols=248 Identities=27% Similarity=0.435 Sum_probs=194.2
Q ss_pred EEEEEEeecCceEEEEEEEC----CCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCcc
Q 007541 26 KIEEVIGKGSYGVVCSAYDT----RTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKD 101 (599)
Q Consensus 26 ~i~~~LG~G~~g~V~~a~d~----~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~ 101 (599)
.+.+.||.|+||.||+|... ..+..|+||.++. .........+.+|+.+|+.++||||+++++++... ..
T Consensus 2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~-~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~-----~~ 75 (259)
T PF07714_consen 2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKP-SSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIEN-----EP 75 (259)
T ss_dssp EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEEST-TSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESS-----SS
T ss_pred EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEecc-ccccccceeeeeccccccccccccccccccccccc-----cc
Confidence 57889999999999999987 4567899999964 23334577899999999999999999999999632 35
Q ss_pred EEEEEecCC-cCHHHHHHhC--CCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccC
Q 007541 102 IYVVFELME-SDLHQVIKAN--DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFN 178 (599)
Q Consensus 102 iylV~E~~~-g~L~~~i~~~--~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~ 178 (599)
+++|+||+. |+|.+++... ..+++..+..++.||+.||.|||+++|+|+||+++|||++.++.+||+|||++.....
T Consensus 76 ~~lv~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~ 155 (259)
T PF07714_consen 76 LFLVMEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISE 155 (259)
T ss_dssp EEEEEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEETTTEEEEESTTTGEETTT
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 999999998 7999999987 6899999999999999999999999999999999999999999999999999987622
Q ss_pred CCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHh-CCCCCCCCChhhHHHHHHHhcCCCCHHHHHH
Q 007541 179 DTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLLGTPSPEAIAR 257 (599)
Q Consensus 179 ~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLlt-G~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~ 257 (599)
... ............|+|||.+.. ..++.++||||||++++||++ |+.||.+.+..+....+.+..
T Consensus 156 ~~~-~~~~~~~~~~~~~~aPE~~~~--~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~~~~~~~~~---------- 222 (259)
T PF07714_consen 156 KSK-YKNDSSQQLPLRYLAPEVLKD--GEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEEIIEKLKQGQ---------- 222 (259)
T ss_dssp SSS-EEESTTSESGGGGS-HHHHHH--SEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHHHHHHHTTE----------
T ss_pred ccc-ccccccccccccccccccccc--ccccccccccccccccccccccccccccccccccccccccccc----------
Confidence 211 111233456778999999876 568999999999999999999 788887765544333332100
Q ss_pred HhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHH
Q 007541 258 VCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLER 337 (599)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~ 337 (599)
.. ......+..+.+||.+
T Consensus 223 -----------------------------------------------------------~~---~~~~~~~~~~~~li~~ 240 (259)
T PF07714_consen 223 -----------------------------------------------------------RL---PIPDNCPKDIYSLIQQ 240 (259)
T ss_dssp -----------------------------------------------------------ET---TSBTTSBHHHHHHHHH
T ss_pred -----------------------------------------------------------cc---eeccchhHHHHHHHHH
Confidence 00 1113467789999999
Q ss_pred hcccCCCCCCCHHHHhc
Q 007541 338 MLAFEPKDRPTAEEALA 354 (599)
Q Consensus 338 mL~~DP~~RpTa~e~L~ 354 (599)
||..||.+|||+.++++
T Consensus 241 C~~~~p~~RPs~~~i~~ 257 (259)
T PF07714_consen 241 CWSHDPEKRPSFQEILQ 257 (259)
T ss_dssp HT-SSGGGS--HHHHHH
T ss_pred HcCCChhhCcCHHHHHh
Confidence 99999999999999974
No 348
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=1.6e-36 Score=308.29 Aligned_cols=256 Identities=22% Similarity=0.367 Sum_probs=199.4
Q ss_pred eEEEEEEeecCceEEEEEEEC---CCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCC-Cc
Q 007541 25 YKIEEVIGKGSYGVVCSAYDT---RTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRRE-FK 100 (599)
Q Consensus 25 Y~i~~~LG~G~~g~V~~a~d~---~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~-~~ 100 (599)
|.+.++||+|+||.||+|.++ .++..||||++..........+.+.+|+.+|+.++||||+++++++....... ..
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 80 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP 80 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence 678899999999999999865 36789999999765555556677889999999999999999999886543222 22
Q ss_pred cEEEEEecCC-cCHHHHHHhC------CCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCcc
Q 007541 101 DIYVVFELME-SDLHQVIKAN------DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLA 173 (599)
Q Consensus 101 ~iylV~E~~~-g~L~~~i~~~------~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA 173 (599)
..++++||+. ++|.+++... ..++...+..++.||+.||+|||+.||+||||||+|||++.++.+||+|||++
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili~~~~~~kl~dfg~~ 160 (273)
T cd05074 81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLNENMTVCVADFGLS 160 (273)
T ss_pred ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEEcCCCCEEECccccc
Confidence 4578999998 6898887532 14788999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHh-CCCCCCCCChhhHHHHHHHhcCCCCH
Q 007541 174 RVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLLGTPSP 252 (599)
Q Consensus 174 ~~~~~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLlt-G~~pF~g~~~~~~l~~I~~~lG~p~~ 252 (599)
+........ .......++..|++||.+.. ..++.++|||||||++|+|++ |+++|.+.+..+....+...
T Consensus 161 ~~~~~~~~~-~~~~~~~~~~~~~~pe~~~~--~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~------ 231 (273)
T cd05074 161 KKIYSGDYY-RQGCASKLPVKWLALESLAD--NVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYNYLIKG------ 231 (273)
T ss_pred ccccCCcce-ecCCCccCchhhcCHhHHhc--CccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHcC------
Confidence 865322111 01122345567999998876 578899999999999999999 88999776543322221100
Q ss_pred HHHHHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHH
Q 007541 253 EAIARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLAL 332 (599)
Q Consensus 253 e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~ 332 (599)
... ...+..++.+.
T Consensus 232 ---------------------------------------------------------------~~~---~~~~~~~~~~~ 245 (273)
T cd05074 232 ---------------------------------------------------------------NRL---KQPPDCLEDVY 245 (273)
T ss_pred ---------------------------------------------------------------CcC---CCCCCCCHHHH
Confidence 000 01134667899
Q ss_pred HHHHHhcccCCCCCCCHHHHhcC
Q 007541 333 RLLERMLAFEPKDRPTAEEALAD 355 (599)
Q Consensus 333 dLL~~mL~~DP~~RpTa~e~L~H 355 (599)
+|+.+||+.+|.+|||+.|++.+
T Consensus 246 ~l~~~~l~~~p~~Rps~~~~~~~ 268 (273)
T cd05074 246 ELMCQCWSPEPKCRPSFQHLRDQ 268 (273)
T ss_pred HHHHHHcCCChhhCcCHHHHHHH
Confidence 99999999999999999999864
No 349
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=3.4e-36 Score=311.31 Aligned_cols=266 Identities=18% Similarity=0.205 Sum_probs=194.2
Q ss_pred CCCceEEEEEEeecCceEEEEEEECCC---CcEEEEEEecCcccChhhH---------HHHHHHHHHHHhcCCCCccccc
Q 007541 21 EGSRYKIEEVIGKGSYGVVCSAYDTRT---GEKVAIKKINDIFEHVSDA---------TRILREIKLLRLLRHPDIVEIK 88 (599)
Q Consensus 21 ~~~rY~i~~~LG~G~~g~V~~a~d~~t---g~~vAIK~i~~~~~~~~~~---------~~i~rEi~iL~~l~HpnIv~l~ 88 (599)
.+++|++.++||+|+||+||+|.+..+ +..+|+|+........... .....++..++.+.|+||++++
T Consensus 10 ~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~ 89 (294)
T PHA02882 10 TGKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYY 89 (294)
T ss_pred CCCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEE
Confidence 357999999999999999999998887 6777877643211111000 1122334445667899999999
Q ss_pred eeecCCCcCCCccEEEEEecCCcCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeee
Q 007541 89 HILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKIC 168 (599)
Q Consensus 89 ~v~~~~s~~~~~~iylV~E~~~g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~ 168 (599)
++...... .....++++|++..++.+.+......++..++.++.||+.||.|||+.+|+||||||+|||++.++.+||+
T Consensus 90 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill~~~~~~~l~ 168 (294)
T PHA02882 90 GCGSFKRC-RMYYRFILLEKLVENTKEIFKRIKCKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMVDGNNRGYII 168 (294)
T ss_pred EeeeEecC-CceEEEEEEehhccCHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCcEEEE
Confidence 87643321 11245788998888888888766567889999999999999999999999999999999999999999999
Q ss_pred ccCccccccCCCCCc----ccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHH
Q 007541 169 DFGLARVAFNDTPTA----IFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMT 244 (599)
Q Consensus 169 DFGlA~~~~~~~~~~----~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~ 244 (599)
|||+|+......... .......||+.|+|||++.+ ..++.++||||+||++++|++|..||.+.+....+....
T Consensus 169 DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~--~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~~~ 246 (294)
T PHA02882 169 DYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNG--ACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIHAA 246 (294)
T ss_pred EcCCceeeccCCcccccccccccccCCCccccCHHHhCC--CCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHHHh
Confidence 999998653221110 11123469999999999876 679999999999999999999999998764222111110
Q ss_pred HhcCCCCHHHHHHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCC
Q 007541 245 DLLGTPSPEAIARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKF 324 (599)
Q Consensus 245 ~~lG~p~~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (599)
+ .+++..+.... ...
T Consensus 247 ~------------------------------------------------------------~~~~~~~~~~~-----~~~ 261 (294)
T PHA02882 247 K------------------------------------------------------------CDFIKRLHEGK-----IKI 261 (294)
T ss_pred H------------------------------------------------------------HHHHHHhhhhh-----hcc
Confidence 0 01111111110 012
Q ss_pred CCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 007541 325 PNANPLALRLLERMLAFEPKDRPTAEEALA 354 (599)
Q Consensus 325 ~~~s~~a~dLL~~mL~~DP~~RpTa~e~L~ 354 (599)
++.++.+.++++.|+..||.+||+.+++++
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~ 291 (294)
T PHA02882 262 KNANKFIYDFIECVTKLSYEEKPDYDALIK 291 (294)
T ss_pred CCCCHHHHHHHHHHHhCCCCCCCCHHHHHH
Confidence 345788999999999999999999999975
No 350
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=2.2e-36 Score=303.49 Aligned_cols=244 Identities=26% Similarity=0.422 Sum_probs=193.2
Q ss_pred EEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEEEEEec
Q 007541 29 EVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVVFEL 108 (599)
Q Consensus 29 ~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~iylV~E~ 108 (599)
++||.|+||.||+|.+.. ++.||+|++...... .....+.+|+.+++.++|+||+++++++.. ....|+||||
T Consensus 1 ~~lg~g~~g~v~~~~~~~-~~~v~~K~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-----~~~~~~v~e~ 73 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKG-NTEVAVKTCRSTLPP-DLKRKFLQEAEILKQYDHPNIVKLIGVCVQ-----KQPIYIVMEL 73 (251)
T ss_pred CccccCCCceEEEEEEeC-CCcEEEEeccccCCH-HHHHHHHHHHHHHHhCCCCCeEEEEEEEec-----CCCeEEEEEc
Confidence 469999999999999988 999999998753332 345678899999999999999999998843 3478999999
Q ss_pred CC-cCHHHHHHhC-CCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCCCCCcccc
Q 007541 109 ME-SDLHQVIKAN-DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFW 186 (599)
Q Consensus 109 ~~-g~L~~~i~~~-~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~~~~~~~ 186 (599)
+. ++|.+++... ..+++..+..++.|++.+|.|||++|++||||||+|||++.++.+||+|||+++.......... .
T Consensus 74 ~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~-~ 152 (251)
T cd05041 74 VPGGSLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVS-D 152 (251)
T ss_pred CCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEEcCCCcEEEeeccccccccCCcceec-c
Confidence 97 6899998664 4689999999999999999999999999999999999999999999999999976432111100 0
Q ss_pred cccccCccccCccccccccCCCCcchhhHhHHHHHHHHHh-CCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHhhhhhhh
Q 007541 187 TDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVCLLLNII 265 (599)
Q Consensus 187 t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLlt-G~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~~~~~~~ 265 (599)
.....+..|+|||.+.+ ..++.++|||||||++++|++ |..||.+.........+....
T Consensus 153 ~~~~~~~~y~~PE~~~~--~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~~~~~------------------ 212 (251)
T cd05041 153 GLKQIPIKWTAPEALNY--GRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIESGY------------------ 212 (251)
T ss_pred ccCcceeccCChHhhcc--CCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHHHhcCC------------------
Confidence 11233556999998866 578999999999999999998 888887765433222211100
Q ss_pred hcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCC
Q 007541 266 WCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKD 345 (599)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL~~DP~~ 345 (599)
... .....+..+.+||.+||..+|.+
T Consensus 213 ---------------------------------------------------~~~---~~~~~~~~~~~li~~~l~~~p~~ 238 (251)
T cd05041 213 ---------------------------------------------------RMP---APQLCPEEIYRLMLQCWAYDPEN 238 (251)
T ss_pred ---------------------------------------------------CCC---CCccCCHHHHHHHHHHhccChhh
Confidence 000 11235678999999999999999
Q ss_pred CCCHHHHhc
Q 007541 346 RPTAEEALA 354 (599)
Q Consensus 346 RpTa~e~L~ 354 (599)
|||+.|+|+
T Consensus 239 Rp~~~ell~ 247 (251)
T cd05041 239 RPSFSEIYN 247 (251)
T ss_pred CcCHHHHHH
Confidence 999999986
No 351
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=100.00 E-value=9.3e-37 Score=305.36 Aligned_cols=228 Identities=25% Similarity=0.350 Sum_probs=184.5
Q ss_pred cCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEEEEEecCC-cC
Q 007541 34 GSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVVFELME-SD 112 (599)
Q Consensus 34 G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~iylV~E~~~-g~ 112 (599)
|.+|.||+|+++.+++.||+|++.... ...+|...+....||||+++++++.. ...+|+||||+. ++
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-------~~~~~~~~~~~~~~~~i~~~~~~~~~-----~~~~~lv~e~~~~~~ 71 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS-------EYSRERLTIIPHCVPNMVCLHKYIVS-----EDSVFLVLQHAEGGK 71 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh-------hhhhHHHHHHhcCCCceeehhhheec-----CCeEEEEEecCCCCC
Confidence 889999999999999999999986531 12245555555679999999998843 357999999999 59
Q ss_pred HHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCCCCCcccccccccC
Q 007541 113 LHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVAT 192 (599)
Q Consensus 113 L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~~~~~~~t~~~gt 192 (599)
|.+++.....+++..+..++.||+.||.|||+.||+||||||+||+++.++.++|+|||++....... ....++
T Consensus 72 L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~------~~~~~~ 145 (237)
T cd05576 72 LWSHISKFLNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSC------DGEAVE 145 (237)
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEecccchhcccccc------ccCCcC
Confidence 99999887789999999999999999999999999999999999999999999999999886543221 233567
Q ss_pred ccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHhhhhhhhhcCCCCC
Q 007541 193 RWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVCLLLNIIWCGYDGF 272 (599)
Q Consensus 193 ~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~~~~~~~~~~~~~~ 272 (599)
..|+|||.+.. ..++.++|+||+||++|+|++|+.+|....... .
T Consensus 146 ~~y~aPE~~~~--~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~-----------------~---------------- 190 (237)
T cd05576 146 NMYCAPEVGGI--SEETEACDWWSLGAILFELLTGKTLVECHPSGI-----------------N---------------- 190 (237)
T ss_pred ccccCCcccCC--CCCCchhhHHHHHHHHHHHHHCcchhhcCchhc-----------------c----------------
Confidence 78999999866 578899999999999999999998774321000 0
Q ss_pred cccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCH---
Q 007541 273 MCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTA--- 349 (599)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL~~DP~~RpTa--- 349 (599)
..... ...+.+++.+.+||.+||+.||++|+|+
T Consensus 191 -----------------------------------------~~~~~---~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~ 226 (237)
T cd05576 191 -----------------------------------------THTTL---NIPEWVSEEARSLLQQLLQFNPTERLGAGVA 226 (237)
T ss_pred -----------------------------------------ccccc---CCcccCCHHHHHHHHHHccCCHHHhcCCCcc
Confidence 00000 0113467889999999999999999996
Q ss_pred --HHHhcCccc
Q 007541 350 --EEALADPYF 358 (599)
Q Consensus 350 --~e~L~HP~f 358 (599)
+|+++||||
T Consensus 227 ~~~~~~~h~~~ 237 (237)
T cd05576 227 GVEDIKSHPFF 237 (237)
T ss_pred chHHHHcCCCC
Confidence 999999998
No 352
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=3.1e-36 Score=311.16 Aligned_cols=206 Identities=25% Similarity=0.419 Sum_probs=166.4
Q ss_pred CCceEEEEEEeecCceEEEEEEECC----------------CCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCcc
Q 007541 22 GSRYKIEEVIGKGSYGVVCSAYDTR----------------TGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIV 85 (599)
Q Consensus 22 ~~rY~i~~~LG~G~~g~V~~a~d~~----------------tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv 85 (599)
.++|++.+.||+|+||+||+|.+.. ++..||+|++.... .......+.+|+.+|+.++|+||+
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~-~~~~~~~~~~E~~~l~~l~~~~i~ 82 (296)
T cd05095 4 RKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDA-NKNARNDFLKEIKIMSRLKDPNII 82 (296)
T ss_pred hhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccC-CHHHHHHHHHHHHHHHhCCCCCcc
Confidence 3679999999999999999986543 34579999986432 233446788999999999999999
Q ss_pred ccceeecCCCcCCCccEEEEEecCC-cCHHHHHHhCC-----------CCCHHHHHHHHHHHHhhhhhcccCceEeecCC
Q 007541 86 EIKHILLPPSRREFKDIYVVFELME-SDLHQVIKAND-----------DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLK 153 (599)
Q Consensus 86 ~l~~v~~~~s~~~~~~iylV~E~~~-g~L~~~i~~~~-----------~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLK 153 (599)
++++++... ..+|+||||+. ++|.+++.... .+++..+..++.||+.||+|||+.||+|||||
T Consensus 83 ~~~~~~~~~-----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlk 157 (296)
T cd05095 83 RLLAVCITS-----DPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLA 157 (296)
T ss_pred eEEEEEecC-----CccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeecccCC
Confidence 999998443 46899999998 69999987642 36677899999999999999999999999999
Q ss_pred CCcEEeCCCCceeeeccCccccccCCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHh--CCCCC
Q 007541 154 PKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT--GKPLF 231 (599)
Q Consensus 154 P~NILv~~~~~lKL~DFGlA~~~~~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLlt--G~~pF 231 (599)
|+|||++.++.+||+|||+++........ .......++..|+|||.+.. ..++.++|||||||++|+|++ |..||
T Consensus 158 p~Nili~~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~~~~~pe~~~~--~~~~~~~DiwSlG~~l~el~~~~~~~p~ 234 (296)
T cd05095 158 TRNCLVGKNYTIKIADFGMSRNLYSGDYY-RIQGRAVLPIRWMSWESILL--GKFTTASDVWAFGVTLWEILTLCKEQPY 234 (296)
T ss_pred hheEEEcCCCCEEeccCcccccccCCcce-eccCcCcCccccCCHHHHhc--CCccchhhhhHHHHHHHHHHHhCCCCCc
Confidence 99999999999999999999765332211 11122344678999998765 578999999999999999998 66788
Q ss_pred CCCCh
Q 007541 232 PGKNV 236 (599)
Q Consensus 232 ~g~~~ 236 (599)
...+.
T Consensus 235 ~~~~~ 239 (296)
T cd05095 235 SQLSD 239 (296)
T ss_pred cccCh
Confidence 65543
No 353
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=4.5e-36 Score=301.08 Aligned_cols=243 Identities=24% Similarity=0.416 Sum_probs=192.3
Q ss_pred EEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEEEEEec
Q 007541 29 EVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVVFEL 108 (599)
Q Consensus 29 ~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~iylV~E~ 108 (599)
++||+|+||.||+|.+ .++..||+|+++.... ......+.+|+.+++.++||||+++++++.. ....|+||||
T Consensus 1 ~~ig~g~~g~vy~~~~-~~~~~~a~K~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~~lv~e~ 73 (250)
T cd05085 1 ELLGKGNFGEVFKGTL-KDKTPVAVKTCKEDLP-QELKIKFLSEARILKQYDHPNIVKLIGVCTQ-----RQPIYIVMEL 73 (250)
T ss_pred CccCCCCCceEEEEEe-cCCcEEEEEecCCcCC-HHHHHHHHHHHHHHHhCCCCCcCeEEEEEec-----CCccEEEEEC
Confidence 3689999999999985 4688999999875432 2234468899999999999999999999843 3468999999
Q ss_pred CC-cCHHHHHHhC-CCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCCCCCcccc
Q 007541 109 ME-SDLHQVIKAN-DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFW 186 (599)
Q Consensus 109 ~~-g~L~~~i~~~-~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~~~~~~~ 186 (599)
+. ++|.+++... ..+++..+..++.||+.+|.|||++|++||||||+||+++.++.+||+|||+++......... .
T Consensus 74 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~--~ 151 (250)
T cd05085 74 VPGGDFLSFLRKKKDELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSS--S 151 (250)
T ss_pred CCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEEcCCCeEEECCCccceecccccccc--C
Confidence 98 6999988754 468999999999999999999999999999999999999999999999999997543221111 1
Q ss_pred cccccCccccCccccccccCCCCcchhhHhHHHHHHHHHh-CCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHhhhhhhh
Q 007541 187 TDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVCLLLNII 265 (599)
Q Consensus 187 t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLlt-G~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~~~~~~~ 265 (599)
....++..|+|||++.. ..++.++||||+||++++|++ |..||.+.+.......+..
T Consensus 152 ~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~~~~-------------------- 209 (250)
T cd05085 152 GLKQIPIKWTAPEALNY--GRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVEK-------------------- 209 (250)
T ss_pred CCCCCcccccCHHHhcc--CCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHc--------------------
Confidence 12234567999999876 578899999999999999998 9999987654332222110
Q ss_pred hcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCC
Q 007541 266 WCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKD 345 (599)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL~~DP~~ 345 (599)
... .......+..+.+|+.+||..||++
T Consensus 210 -------------------------------------------------~~~---~~~~~~~~~~~~~li~~~l~~~p~~ 237 (250)
T cd05085 210 -------------------------------------------------GYR---MSCPQKCPDDVYKVMQRCWDYKPEN 237 (250)
T ss_pred -------------------------------------------------CCC---CCCCCCCCHHHHHHHHHHcccCccc
Confidence 000 0112346788999999999999999
Q ss_pred CCCHHHHhc
Q 007541 346 RPTAEEALA 354 (599)
Q Consensus 346 RpTa~e~L~ 354 (599)
|||+.|+++
T Consensus 238 Rp~~~~l~~ 246 (250)
T cd05085 238 RPKFSELQK 246 (250)
T ss_pred CCCHHHHHH
Confidence 999999976
No 354
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=4.2e-36 Score=305.91 Aligned_cols=252 Identities=22% Similarity=0.368 Sum_probs=199.3
Q ss_pred CceEEEEEEeecCceEEEEEEECCC-----CcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcC
Q 007541 23 SRYKIEEVIGKGSYGVVCSAYDTRT-----GEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRR 97 (599)
Q Consensus 23 ~rY~i~~~LG~G~~g~V~~a~d~~t-----g~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~ 97 (599)
++|++++.||+|+||.||+|+.+.+ .+.||+|.+... ........+.+|+.+|+.++|+||+++++++..
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~---- 79 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKT-KDENLQSEFRRELDMFRKLSHKNVVRLLGLCRE---- 79 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCc-cchHHHHHHHHHHHHHHhcCCcceeeeEEEECC----
Confidence 6799999999999999999997643 467999987542 222235678899999999999999999998843
Q ss_pred CCccEEEEEecCC-cCHHHHHHhCC---------CCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceee
Q 007541 98 EFKDIYVVFELME-SDLHQVIKAND---------DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKI 167 (599)
Q Consensus 98 ~~~~iylV~E~~~-g~L~~~i~~~~---------~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL 167 (599)
....|+||||++ ++|.+++.... .+++..+..++.||+.||+|||+.||+||||||+|||++.++.++|
T Consensus 80 -~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l 158 (275)
T cd05046 80 -AEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLVSSQREVKV 158 (275)
T ss_pred -CCcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEEeCCCcEEE
Confidence 346899999998 69999998765 6899999999999999999999999999999999999999999999
Q ss_pred eccCccccccCCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHh-CCCCCCCCChhhHHHHHHHh
Q 007541 168 CDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDL 246 (599)
Q Consensus 168 ~DFGlA~~~~~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLlt-G~~pF~g~~~~~~l~~I~~~ 246 (599)
+|||++........ .......++..|+|||.+.+ ..++.++|||||||++++|++ |..||.+......+..+..
T Consensus 159 ~~~~~~~~~~~~~~--~~~~~~~~~~~y~~PE~~~~--~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~~~~~~~~- 233 (275)
T cd05046 159 SLLSLSKDVYNSEY--YKLRNALIPLRWLAPEAVQE--DDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNRLQA- 233 (275)
T ss_pred cccccccccCcccc--cccCCceeEEeecChhhhcc--CCCCchhhHHHHHHHHHHHHhCCCCCccccchHHHHHHHHc-
Confidence 99999875432211 12233456778999998866 567899999999999999998 7888865443222221110
Q ss_pred cCCCCHHHHHHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCC
Q 007541 247 LGTPSPEAIARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPN 326 (599)
Q Consensus 247 lG~p~~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (599)
....+ .....
T Consensus 234 ---------------------------------------------------------------------~~~~~-~~~~~ 243 (275)
T cd05046 234 ---------------------------------------------------------------------GKLEL-PVPEG 243 (275)
T ss_pred ---------------------------------------------------------------------CCcCC-CCCCC
Confidence 00000 01134
Q ss_pred CCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 007541 327 ANPLALRLLERMLAFEPKDRPTAEEALAD 355 (599)
Q Consensus 327 ~s~~a~dLL~~mL~~DP~~RpTa~e~L~H 355 (599)
.+..+.++|.+||+.||.+|||+.|+|.+
T Consensus 244 ~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~ 272 (275)
T cd05046 244 CPSRLYKLMTRCWAVNPKDRPSFSELVSA 272 (275)
T ss_pred CCHHHHHHHHHHcCCCcccCCCHHHHHHH
Confidence 67789999999999999999999999874
No 355
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=5.2e-36 Score=310.92 Aligned_cols=253 Identities=25% Similarity=0.385 Sum_probs=199.3
Q ss_pred CCCceEEEEEEeecCceEEEEEEECCCCc----EEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCc
Q 007541 21 EGSRYKIEEVIGKGSYGVVCSAYDTRTGE----KVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSR 96 (599)
Q Consensus 21 ~~~rY~i~~~LG~G~~g~V~~a~d~~tg~----~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~ 96 (599)
..++|++.+.||+|+||.||+|.+..+|+ .||+|.+.... .......+.+|+.+++.++||||+++++++...
T Consensus 5 ~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-- 81 (303)
T cd05110 5 KETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETT-GPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-- 81 (303)
T ss_pred chhhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccC-CHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC--
Confidence 34678999999999999999999988876 57888876422 223334678999999999999999999988532
Q ss_pred CCCccEEEEEecCC-cCHHHHHHhCC-CCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccc
Q 007541 97 REFKDIYVVFELME-SDLHQVIKAND-DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLAR 174 (599)
Q Consensus 97 ~~~~~iylV~E~~~-g~L~~~i~~~~-~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~ 174 (599)
..++|+||+. |+|.+++.... .+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++
T Consensus 82 ----~~~~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill~~~~~~kL~Dfg~~~ 157 (303)
T cd05110 82 ----TIQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLAR 157 (303)
T ss_pred ----CceeeehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeeecCCCceEEccccccc
Confidence 3579999999 78999987754 68999999999999999999999999999999999999999999999999998
Q ss_pred cccCCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHh-CCCCCCCCChhhHHHHHHHhcCCCCHH
Q 007541 175 VAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLLGTPSPE 253 (599)
Q Consensus 175 ~~~~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLlt-G~~pF~g~~~~~~l~~I~~~lG~p~~e 253 (599)
........ .......++..|+|||.+.+ ..++.++|||||||++++|++ |..||.+....+....+..
T Consensus 158 ~~~~~~~~-~~~~~~~~~~~y~~PE~~~~--~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~~~~~~~-------- 226 (303)
T cd05110 158 LLEGDEKE-YNADGGKMPIKWMALECIHY--RKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEK-------- 226 (303)
T ss_pred cccCcccc-cccCCCccccccCCHHHhcc--CCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHC--------
Confidence 65332211 11223456778999999876 678999999999999999997 8899976543222111110
Q ss_pred HHHHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHH
Q 007541 254 AIARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALR 333 (599)
Q Consensus 254 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~d 333 (599)
....+ ..+..+..+.+
T Consensus 227 -------------------------------------------------------------~~~~~---~~~~~~~~~~~ 242 (303)
T cd05110 227 -------------------------------------------------------------GERLP---QPPICTIDVYM 242 (303)
T ss_pred -------------------------------------------------------------CCCCC---CCCCCCHHHHH
Confidence 00000 11335677899
Q ss_pred HHHHhcccCCCCCCCHHHHhcC
Q 007541 334 LLERMLAFEPKDRPTAEEALAD 355 (599)
Q Consensus 334 LL~~mL~~DP~~RpTa~e~L~H 355 (599)
+|.+||..||.+|||+.++++.
T Consensus 243 li~~c~~~~p~~Rp~~~~l~~~ 264 (303)
T cd05110 243 VMVKCWMIDADSRPKFKELAAE 264 (303)
T ss_pred HHHHHcCCChhhCcCHHHHHHH
Confidence 9999999999999999999874
No 356
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=7.1e-36 Score=303.49 Aligned_cols=204 Identities=24% Similarity=0.349 Sum_probs=159.0
Q ss_pred EEEeecCceEEEEEEECC--CCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEEEEE
Q 007541 29 EVIGKGSYGVVCSAYDTR--TGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVVF 106 (599)
Q Consensus 29 ~~LG~G~~g~V~~a~d~~--tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~iylV~ 106 (599)
+.||+|+||+||+|.... ....+|+|.+.... .......+.+|+.+++.++|+||+++++.+... ..+|+||
T Consensus 1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~-----~~~~lv~ 74 (269)
T cd05042 1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASA-TPDEQLLFLQEVQPYRELNHPNVLQCLGQCIES-----IPYLLVL 74 (269)
T ss_pred CcCCccCCceEEEEEEecCCCCeEEEEeecCccC-ChHHHHHHHHHHHHHHhCCCCCcceEEEEECCC-----CceEEEE
Confidence 358999999999996433 44678888775422 223345678999999999999999999988533 4689999
Q ss_pred ecCC-cCHHHHHHhCC-----CCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCCC
Q 007541 107 ELME-SDLHQVIKAND-----DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT 180 (599)
Q Consensus 107 E~~~-g~L~~~i~~~~-----~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~ 180 (599)
||+. ++|.+++.... ..++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++......
T Consensus 75 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~ 154 (269)
T cd05042 75 EFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPED 154 (269)
T ss_pred EeCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEecCCCcEEEeccccccccccch
Confidence 9998 69999997643 24678889999999999999999999999999999999999999999999986532211
Q ss_pred CCcccccccccCccccCccccccc-----cCCCCcchhhHhHHHHHHHHHh-CCCCCCCCChhhH
Q 007541 181 PTAIFWTDYVATRWYRAPELCGSF-----FSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQ 239 (599)
Q Consensus 181 ~~~~~~t~~~gt~~Y~APE~l~~~-----~~~ys~~~DIWSlG~Il~eLlt-G~~pF~g~~~~~~ 239 (599)
... ......++..|+|||++... ...++.++|||||||++|+|++ |..||......+.
T Consensus 155 ~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~ 218 (269)
T cd05042 155 YYI-TKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQV 218 (269)
T ss_pred hee-ccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHH
Confidence 100 01223456779999986421 1357889999999999999999 7888877654443
No 357
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=6.1e-36 Score=301.41 Aligned_cols=240 Identities=26% Similarity=0.456 Sum_probs=194.9
Q ss_pred CceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccE
Q 007541 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDI 102 (599)
Q Consensus 23 ~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~i 102 (599)
++|++.+.||+|+||.||++. .+++.||+|+++.. .....+.+|+.+++.++||||+++++++... ..
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~--~~~~~~~iK~~~~~----~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~------~~ 73 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGE--YTGQKVAVKNIKCD----VTAQAFLEETAVMTKLHHKNLVRLLGVILHN------GL 73 (254)
T ss_pred HHceeeeeeccCCCCceEecc--cCCCceEEEeecCc----chHHHHHHHHHHHHhCCCCCcCeEEEEEcCC------Cc
Confidence 679999999999999999985 57889999998642 2345678999999999999999999988432 47
Q ss_pred EEEEecCC-cCHHHHHHhCC--CCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCC
Q 007541 103 YVVFELME-SDLHQVIKAND--DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFND 179 (599)
Q Consensus 103 ylV~E~~~-g~L~~~i~~~~--~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~ 179 (599)
|+||||+. ++|.+++.... .+++..+..++.||+.||.|||++|++||||||+|||++.++.+||+|||++......
T Consensus 74 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~ 153 (254)
T cd05083 74 YIVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMG 153 (254)
T ss_pred EEEEECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCcEEECCCccceecccc
Confidence 99999998 69999997653 5789999999999999999999999999999999999999999999999999754221
Q ss_pred CCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHh-CCCCCCCCChhhHHHHHHHhcCCCCHHHHHHH
Q 007541 180 TPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLLGTPSPEAIARV 258 (599)
Q Consensus 180 ~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLlt-G~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~ 258 (599)
. .....+..|+|||.+.. ..++.++|||||||++++|++ |++||.+.+..+....+..
T Consensus 154 ~------~~~~~~~~y~~pe~~~~--~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~------------- 212 (254)
T cd05083 154 V------DNSKLPVKWTAPEALKH--KKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKECVEK------------- 212 (254)
T ss_pred C------CCCCCCceecCHHHhcc--CCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhC-------------
Confidence 1 12234567999998866 578899999999999999997 9999987654332222110
Q ss_pred hhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHh
Q 007541 259 CLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERM 338 (599)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~m 338 (599)
.... ......++.+.+||.+|
T Consensus 213 --------------------------------------------------------~~~~---~~~~~~~~~~~~li~~~ 233 (254)
T cd05083 213 --------------------------------------------------------GYRM---EPPEGCPADVYVLMTSC 233 (254)
T ss_pred --------------------------------------------------------CCCC---CCCCcCCHHHHHHHHHH
Confidence 0000 01134678899999999
Q ss_pred cccCCCCCCCHHHHhc
Q 007541 339 LAFEPKDRPTAEEALA 354 (599)
Q Consensus 339 L~~DP~~RpTa~e~L~ 354 (599)
|+.+|.+|||++++++
T Consensus 234 l~~~p~~Rp~~~~l~~ 249 (254)
T cd05083 234 WETEPKKRPSFHKLRE 249 (254)
T ss_pred cCCChhhCcCHHHHHH
Confidence 9999999999999976
No 358
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=7.2e-36 Score=301.71 Aligned_cols=248 Identities=25% Similarity=0.392 Sum_probs=189.2
Q ss_pred EEEeecCceEEEEEEECC---CCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEEEE
Q 007541 29 EVIGKGSYGVVCSAYDTR---TGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVV 105 (599)
Q Consensus 29 ~~LG~G~~g~V~~a~d~~---tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~iylV 105 (599)
+.||+|+||.||+|.+.. .+..||||++... ........+.+|+.+++.++||||+++++++... ....|+|
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~-~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~----~~~~~lv 75 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRI-TDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPS----EGSPLVV 75 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCcc-CCHHHHHHHHHHHHHHccCCCCCcceEEEEeecC----CCCcEEE
Confidence 368999999999998754 3467999988532 2233456788999999999999999999977432 2357899
Q ss_pred EecCC-cCHHHHHHhC-CCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCCCCC-
Q 007541 106 FELME-SDLHQVIKAN-DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPT- 182 (599)
Q Consensus 106 ~E~~~-g~L~~~i~~~-~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~~~- 182 (599)
|||+. ++|.+++... ..+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||+++........
T Consensus 76 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~ 155 (262)
T cd05058 76 LPYMKHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYS 155 (262)
T ss_pred EecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCccccccccCCccee
Confidence 99998 6999999764 35678888899999999999999999999999999999999999999999999754321110
Q ss_pred cccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHh-CCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHhhh
Q 007541 183 AIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVCLL 261 (599)
Q Consensus 183 ~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLlt-G~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~~~ 261 (599)
........++..|+|||.+.. ..++.++|||||||++++|++ |.++|...+..+....+..
T Consensus 156 ~~~~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~---------------- 217 (262)
T cd05058 156 VHNHTGAKLPVKWMALESLQT--QKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDITVYLLQ---------------- 217 (262)
T ss_pred ecccccCcCCccccChhHhcc--CccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhc----------------
Confidence 011123345678999998876 678999999999999999999 5677776543322211100
Q ss_pred hhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHhccc
Q 007541 262 LNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAF 341 (599)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL~~ 341 (599)
...... ....++.+.+|+.+||..
T Consensus 218 -----------------------------------------------------~~~~~~---~~~~~~~~~~li~~cl~~ 241 (262)
T cd05058 218 -----------------------------------------------------GRRLLQ---PEYCPDPLYEVMLSCWHP 241 (262)
T ss_pred -----------------------------------------------------CCCCCC---CCcCCHHHHHHHHHHcCC
Confidence 000000 113467899999999999
Q ss_pred CCCCCCCHHHHhcC
Q 007541 342 EPKDRPTAEEALAD 355 (599)
Q Consensus 342 DP~~RpTa~e~L~H 355 (599)
||++|||+.|+|..
T Consensus 242 ~p~~Rp~~~~il~~ 255 (262)
T cd05058 242 KPEMRPTFSELVSR 255 (262)
T ss_pred ChhhCCCHHHHHHH
Confidence 99999999999863
No 359
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=4.7e-36 Score=324.14 Aligned_cols=254 Identities=25% Similarity=0.374 Sum_probs=198.6
Q ss_pred CCceEEEEEEeecCceEEEEEEEC-----CCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcC-CCCccccceeecCCC
Q 007541 22 GSRYKIEEVIGKGSYGVVCSAYDT-----RTGEKVAIKKINDIFEHVSDATRILREIKLLRLLR-HPDIVEIKHILLPPS 95 (599)
Q Consensus 22 ~~rY~i~~~LG~G~~g~V~~a~d~-----~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~-HpnIv~l~~v~~~~s 95 (599)
.++|.+.+.||+|+||.||+|++. .+++.||||+++... .......+.+|+.+|..+. ||||+++++++...
T Consensus 36 ~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~- 113 (401)
T cd05107 36 RDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTA-RSSEKQALMSELKIMSHLGPHLNIVNLLGACTKG- 113 (401)
T ss_pred HHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCC-ChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccC-
Confidence 467899999999999999999854 456789999997532 2233457889999999997 99999999998543
Q ss_pred cCCCccEEEEEecCC-cCHHHHHHhCC-----------------------------------------------------
Q 007541 96 RREFKDIYVVFELME-SDLHQVIKAND----------------------------------------------------- 121 (599)
Q Consensus 96 ~~~~~~iylV~E~~~-g~L~~~i~~~~----------------------------------------------------- 121 (599)
..+|+||||+. |+|.+++..++
T Consensus 114 ----~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (401)
T cd05107 114 ----GPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADY 189 (401)
T ss_pred ----CCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCc
Confidence 47999999999 69999986532
Q ss_pred ---------------------------------------------CCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCc
Q 007541 122 ---------------------------------------------DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKN 156 (599)
Q Consensus 122 ---------------------------------------------~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~N 156 (599)
.++...+..|+.||+.||.|||+.||+||||||+|
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrdlkp~N 269 (401)
T cd05107 190 VPMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKNCVHRDLAARN 269 (401)
T ss_pred cchhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCcCcccCCcce
Confidence 25667788899999999999999999999999999
Q ss_pred EEeCCCCceeeeccCccccccCCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHh-CCCCCCCCC
Q 007541 157 ILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKN 235 (599)
Q Consensus 157 ILv~~~~~lKL~DFGlA~~~~~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLlt-G~~pF~g~~ 235 (599)
||++.++.+||+|||+++........ .......++..|+|||.+.. ..++.++||||+||+++||++ |..||....
T Consensus 270 iLl~~~~~~kL~DfGla~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~--~~~~~~~DvwslGvil~e~l~~g~~P~~~~~ 346 (401)
T cd05107 270 VLICEGKLVKICDFGLARDIMRDSNY-ISKGSTFLPLKWMAPESIFN--NLYTTLSDVWSFGILLWEIFTLGGTPYPELP 346 (401)
T ss_pred EEEeCCCEEEEEecCcceeccccccc-ccCCCcCCCCceeChHHhcC--CCCCcHhHHHHHHHHHHHHHHcCCCCCCCCC
Confidence 99999999999999999864322111 11123456788999999876 578999999999999999998 888987654
Q ss_pred hhhHHHHHHHhcCCCCHHHHHHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccC
Q 007541 236 VVHQLDIMTDLLGTPSPEAIARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKK 315 (599)
Q Consensus 236 ~~~~l~~I~~~lG~p~~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (599)
..+.+..... ..
T Consensus 347 ~~~~~~~~~~--------------------------------------------------------------------~~ 358 (401)
T cd05107 347 MNEQFYNAIK--------------------------------------------------------------------RG 358 (401)
T ss_pred chHHHHHHHH--------------------------------------------------------------------cC
Confidence 3322211110 00
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 007541 316 KPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALAD 355 (599)
Q Consensus 316 ~~~~~~~~~~~~s~~a~dLL~~mL~~DP~~RpTa~e~L~H 355 (599)
... ......+..+.+||.+||..||.+||++.|+|..
T Consensus 359 ~~~---~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~ 395 (401)
T cd05107 359 YRM---AKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHL 395 (401)
T ss_pred CCC---CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 000 1123467889999999999999999999999864
No 360
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-37 Score=329.06 Aligned_cols=254 Identities=24% Similarity=0.315 Sum_probs=203.1
Q ss_pred CCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCcc
Q 007541 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKD 101 (599)
Q Consensus 22 ~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~ 101 (599)
.+...+...||+|+||+||+|++. -.||||+++-..-....++.|.+|+.+|++-+|.||+-+.+++..+.
T Consensus 391 ~~ev~l~~rIGsGsFGtV~Rg~wh---GdVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~------ 461 (678)
T KOG0193|consen 391 PEEVLLGERIGSGSFGTVYRGRWH---GDVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPP------ 461 (678)
T ss_pred HHHhhccceeccccccceeecccc---cceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCc------
Confidence 466788999999999999999763 45999999877667778899999999999999999999999997653
Q ss_pred EEEEEecCCc-CHHHHHHhC-CCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCC
Q 007541 102 IYVVFELMES-DLHQVIKAN-DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFND 179 (599)
Q Consensus 102 iylV~E~~~g-~L~~~i~~~-~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~ 179 (599)
+.||+.+|+| +|+.+|.-. .++.......|++||++|+.|||.++|||||||..||++.++++|||+||||+..-.--
T Consensus 462 ~AIiTqwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~~w 541 (678)
T KOG0193|consen 462 LAIITQWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFLHEDLKVKIGDFGLATVKTRW 541 (678)
T ss_pred eeeeehhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEEccCCcEEEecccceeeeeee
Confidence 4999999997 899988643 47888999999999999999999999999999999999999999999999999653211
Q ss_pred CCCcccccccccCccccCcccccc-ccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHH-HHHHHhcCCCCHHHHHH
Q 007541 180 TPTAIFWTDYVATRWYRAPELCGS-FFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQL-DIMTDLLGTPSPEAIAR 257 (599)
Q Consensus 180 ~~~~~~~t~~~gt~~Y~APE~l~~-~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l-~~I~~~lG~p~~e~i~~ 257 (599)
.....+....+...|+|||++.. ....|++.+||||+||++|||++|..||...+ .+|+ ..+-.-.+
T Consensus 542 -~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~-~dqIifmVGrG~l--------- 610 (678)
T KOG0193|consen 542 -SGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQN-RDQIIFMVGRGYL--------- 610 (678)
T ss_pred -ccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCC-hhheEEEeccccc---------
Confidence 11111233457778999999843 12569999999999999999999999998433 3332 11111000
Q ss_pred HhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHH
Q 007541 258 VCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLER 337 (599)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~ 337 (599)
.........+...++++|+..
T Consensus 611 -----------------------------------------------------------~pd~s~~~s~~pk~mk~Ll~~ 631 (678)
T KOG0193|consen 611 -----------------------------------------------------------MPDLSKIRSNCPKAMKRLLSD 631 (678)
T ss_pred -----------------------------------------------------------CccchhhhccCHHHHHHHHHH
Confidence 111223334566789999999
Q ss_pred hcccCCCCCCCHHHHhc
Q 007541 338 MLAFEPKDRPTAEEALA 354 (599)
Q Consensus 338 mL~~DP~~RpTa~e~L~ 354 (599)
|+.+++++||+..++|.
T Consensus 632 C~~~~~~eRP~F~~il~ 648 (678)
T KOG0193|consen 632 CWKFDREERPLFPQLLS 648 (678)
T ss_pred HHhcCcccCccHHHHHH
Confidence 99999999999999987
No 361
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=2e-36 Score=306.15 Aligned_cols=191 Identities=18% Similarity=0.275 Sum_probs=156.7
Q ss_pred EEEeecCceEEEEEEECCCCcE-------EEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCcc
Q 007541 29 EVIGKGSYGVVCSAYDTRTGEK-------VAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKD 101 (599)
Q Consensus 29 ~~LG~G~~g~V~~a~d~~tg~~-------vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~ 101 (599)
+.||+|+||+||+|.+..++.. ||+|.+... .......+.+|+.+|+.+.||||+++++++... ..
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~-----~~ 73 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKS--HRNYSESFFEAASMMSQLSHKHLVLNYGVCVCG-----DE 73 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcch--hHHHHHHHHHHHHHHHhCCCCChhheeeEEEeC-----CC
Confidence 3699999999999998765544 888887532 223445778899999999999999999998543 46
Q ss_pred EEEEEecCC-cCHHHHHHhCC-CCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCc--------eeeeccC
Q 007541 102 IYVVFELME-SDLHQVIKAND-DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCK--------LKICDFG 171 (599)
Q Consensus 102 iylV~E~~~-g~L~~~i~~~~-~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~--------lKL~DFG 171 (599)
.++||||+. ++|.+++..++ .+++..+..++.||+.||+|||++||+||||||+|||++.++. +|++|||
T Consensus 74 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g 153 (258)
T cd05078 74 SIMVQEYVKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPG 153 (258)
T ss_pred cEEEEecCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccccCCCceEEecccc
Confidence 899999998 58999997654 5899999999999999999999999999999999999987765 6999999
Q ss_pred ccccccCCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCC-CCCCCC
Q 007541 172 LARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGK-PLFPGK 234 (599)
Q Consensus 172 lA~~~~~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~-~pF~g~ 234 (599)
++...... ....++..|+|||++.+. ..++.++||||+||++|+|++|. ++|...
T Consensus 154 ~~~~~~~~-------~~~~~~~~y~aPE~~~~~-~~~~~~~DiwslG~~l~~l~~g~~~~~~~~ 209 (258)
T cd05078 154 ISITVLPK-------EILLERIPWVPPECIENP-QNLSLAADKWSFGTTLWEIFSGGDKPLSAL 209 (258)
T ss_pred cccccCCc-------hhccccCCccCchhccCC-CCCCchhhHHHHHHHHHHHHcCCCCChhhc
Confidence 98654321 234678889999988652 45789999999999999999984 665543
No 362
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=6.6e-37 Score=325.31 Aligned_cols=263 Identities=25% Similarity=0.419 Sum_probs=212.9
Q ss_pred CceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCc-ccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCcc
Q 007541 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDI-FEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKD 101 (599)
Q Consensus 23 ~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~-~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~ 101 (599)
.-|..++.||-|+||.|++++...|...||+|.+.+. .........+..|-.||..-..+-||+|+-.|.+ ...
T Consensus 629 SmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQD-----kdn 703 (1034)
T KOG0608|consen 629 SMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQD-----KDN 703 (1034)
T ss_pred cceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEecc-----CCc
Confidence 4578899999999999999999999999999988642 3344556678889999999999999999998844 458
Q ss_pred EEEEEecCC-cCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccC--
Q 007541 102 IYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFN-- 178 (599)
Q Consensus 102 iylV~E~~~-g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~-- 178 (599)
+|+||||+. ||+-.+|..-+.+.|+.+++++..|.+||++.|..|+|||||||+|||||.+|+|||+||||+.-+..
T Consensus 704 LYFVMdYIPGGDmMSLLIrmgIFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTH 783 (1034)
T KOG0608|consen 704 LYFVMDYIPGGDMMSLLIRMGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTH 783 (1034)
T ss_pred eEEEEeccCCccHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhccceecccCccceEEccCCceeeeeccccccceecc
Confidence 999999999 69999999989999999999999999999999999999999999999999999999999999864311
Q ss_pred -------CCC------------------------------CcccccccccCccccCccccccccCCCCcchhhHhHHHHH
Q 007541 179 -------DTP------------------------------TAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIF 221 (599)
Q Consensus 179 -------~~~------------------------------~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il 221 (599)
+.. ..+.-...+||+.|+|||+|.. ..|+..+|.||.||||
T Consensus 784 dskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r--~g~~q~cdwws~gvil 861 (1034)
T KOG0608|consen 784 DSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLAR--TGYTQLCDWWSVGVIL 861 (1034)
T ss_pred ccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcc--cCccccchhhHhhHHH
Confidence 000 0000124689999999999987 7899999999999999
Q ss_pred HHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcc
Q 007541 222 AELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVR 301 (599)
Q Consensus 222 ~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (599)
|||+.|++||......+...+|++ |
T Consensus 862 ~em~~g~~pf~~~tp~~tq~kv~n--------------------w----------------------------------- 886 (1034)
T KOG0608|consen 862 YEMLVGQPPFLADTPGETQYKVIN--------------------W----------------------------------- 886 (1034)
T ss_pred HHHhhCCCCccCCCCCcceeeeee--------------------h-----------------------------------
Confidence 999999999987654332222211 1
Q ss_pred cHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCC---HHHHhcCccccCcc
Q 007541 302 NEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPT---AEEALADPYFKGLA 362 (599)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL~~DP~~RpT---a~e~L~HP~f~~~~ 362 (599)
+.++. -....++++++.+||.++.. +++.|+. ++|+-.||||+++.
T Consensus 887 ----~~~l~----------~~~~~~ls~e~~~li~kLc~-sad~RLGkng~d~vKaHpfFkgID 935 (1034)
T KOG0608|consen 887 ----RNFLH----------IPYQGNLSKEALDLIQKLCC-SADSRLGKNGADQVKAHPFFKGID 935 (1034)
T ss_pred ----hhccc----------cccccccCHHHHHHHHHHhc-ChhhhhcccchhhhhcCccccccc
Confidence 11110 01235689999999998654 7888874 78899999999874
No 363
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=1.5e-35 Score=301.32 Aligned_cols=201 Identities=23% Similarity=0.343 Sum_probs=159.8
Q ss_pred EEEeecCceEEEEEEEC--CCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEEEEE
Q 007541 29 EVIGKGSYGVVCSAYDT--RTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVVF 106 (599)
Q Consensus 29 ~~LG~G~~g~V~~a~d~--~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~iylV~ 106 (599)
+.||+|+||+||+|.+. .++..+|+|++..... ......+.+|+.+++.++||||+++++.+... ..+|+||
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-----~~~~lv~ 74 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSAS-VQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEV-----TPYLLVM 74 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCC-hHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCC-----CCcEEEE
Confidence 36899999999999754 4567899999865332 23345688999999999999999999988433 4689999
Q ss_pred ecCC-cCHHHHHHhCC-----CCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCCC
Q 007541 107 ELME-SDLHQVIKAND-----DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT 180 (599)
Q Consensus 107 E~~~-g~L~~~i~~~~-----~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~ 180 (599)
||+. ++|.+++.... .+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||+++......
T Consensus 75 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~ 154 (269)
T cd05087 75 EFCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKED 154 (269)
T ss_pred ECCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEECCccccccccCcc
Confidence 9999 69999987532 35677888999999999999999999999999999999999999999999997543221
Q ss_pred CCcccccccccCccccCcccccccc-----CCCCcchhhHhHHHHHHHHHh-CCCCCCCCCh
Q 007541 181 PTAIFWTDYVATRWYRAPELCGSFF-----SKYTPAIDIWSIGCIFAELLT-GKPLFPGKNV 236 (599)
Q Consensus 181 ~~~~~~t~~~gt~~Y~APE~l~~~~-----~~ys~~~DIWSlG~Il~eLlt-G~~pF~g~~~ 236 (599)
. ........++..|+|||++.... ..++.++||||+||++++|++ |+.||.....
T Consensus 155 ~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~ 215 (269)
T cd05087 155 Y-YVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSD 215 (269)
T ss_pred e-eecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCCh
Confidence 1 11112345678899999885421 236789999999999999996 9999976543
No 364
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=9e-36 Score=304.00 Aligned_cols=207 Identities=29% Similarity=0.446 Sum_probs=171.0
Q ss_pred CCceEEEEEEeecCceEEEEEEEC----CCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcC
Q 007541 22 GSRYKIEEVIGKGSYGVVCSAYDT----RTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRR 97 (599)
Q Consensus 22 ~~rY~i~~~LG~G~~g~V~~a~d~----~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~ 97 (599)
...|++.+.||+|+||.||+|... .+++.||||+++..... .....+.+|+.+++.++|+||+++++++...
T Consensus 3 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~--- 78 (284)
T cd05038 3 KRHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEE-QHRSDFEREIEILRTLDHENIVKYKGVCEKP--- 78 (284)
T ss_pred hhhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccch-HHHHHHHHHHHHHHhCCCCChheEEeeeecC---
Confidence 357888999999999999999854 35889999998754332 3456788999999999999999999987543
Q ss_pred CCccEEEEEecCC-cCHHHHHHhCC-CCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCcccc
Q 007541 98 EFKDIYVVFELME-SDLHQVIKAND-DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARV 175 (599)
Q Consensus 98 ~~~~iylV~E~~~-g~L~~~i~~~~-~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~ 175 (599)
.....|+||||+. ++|.+++.... .+++..+..++.||+.||+|||++||+|+||||+|||++.++.+||+|||++..
T Consensus 79 ~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~ 158 (284)
T cd05038 79 GGRSLRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILVESEDLVKISDFGLAKV 158 (284)
T ss_pred CCCceEEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEcccccccc
Confidence 2357899999998 69999997754 699999999999999999999999999999999999999999999999999987
Q ss_pred ccCCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCC
Q 007541 176 AFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGK 234 (599)
Q Consensus 176 ~~~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~ 234 (599)
...............++..|+|||.+.. ..++.++|||||||++++|++|+.+|...
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~Pe~~~~--~~~~~~~Di~slG~~l~el~tg~~p~~~~ 215 (284)
T cd05038 159 LPEDKDYYYVKEPGESPIFWYAPECLRT--SKFSSASDVWSFGVTLYELFTYGDPSQSP 215 (284)
T ss_pred cccCCcceeccCCCCCcccccCcHHHcc--CCCCcccchHHHhhhhheeeccCCCcccc
Confidence 6422211111122345567999998876 57889999999999999999999887543
No 365
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=8.1e-36 Score=303.05 Aligned_cols=192 Identities=22% Similarity=0.297 Sum_probs=155.4
Q ss_pred EEEeecCceEEEEEEECC------------CCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCc
Q 007541 29 EVIGKGSYGVVCSAYDTR------------TGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSR 96 (599)
Q Consensus 29 ~~LG~G~~g~V~~a~d~~------------tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~ 96 (599)
+.||+|+||.||+|.... ....||+|.+... .......+.+|+.+++.++||||+++++++...
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~--~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~-- 76 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPS--HRDISLAFFETASMMRQVSHKHIVLLYGVCVRD-- 76 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChh--hhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecC--
Confidence 368999999999997432 2346899987642 223345678899999999999999999998543
Q ss_pred CCCccEEEEEecCC-cCHHHHHHh-CCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCc-------eee
Q 007541 97 REFKDIYVVFELME-SDLHQVIKA-NDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCK-------LKI 167 (599)
Q Consensus 97 ~~~~~iylV~E~~~-g~L~~~i~~-~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~-------lKL 167 (599)
...++||||++ ++|..++.. ...+++..+..++.||+.||+|||++||+||||||+|||++.++. +|+
T Consensus 77 ---~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l 153 (262)
T cd05077 77 ---VENIMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDGECGPFIKL 153 (262)
T ss_pred ---CCCEEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCccCCCCceeEe
Confidence 35799999999 577777765 356899999999999999999999999999999999999987664 899
Q ss_pred eccCccccccCCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHH-hCCCCCCCCC
Q 007541 168 CDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELL-TGKPLFPGKN 235 (599)
Q Consensus 168 ~DFGlA~~~~~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLl-tG~~pF~g~~ 235 (599)
+|||++...... ....++..|+|||.+... ..++.++||||+||++|+|+ +|..||.+..
T Consensus 154 ~d~g~~~~~~~~-------~~~~~~~~y~aPE~~~~~-~~~~~~~DiwslG~~l~el~~~~~~p~~~~~ 214 (262)
T cd05077 154 SDPGIPITVLSR-------QECVERIPWIAPECVEDS-KNLSIAADKWSFGTTLWEICYNGEIPLKDKT 214 (262)
T ss_pred CCCCCCccccCc-------ccccccccccChhhhcCC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCcc
Confidence 999998654221 234677889999988632 57889999999999999998 5888887644
No 366
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1e-36 Score=310.81 Aligned_cols=258 Identities=24% Similarity=0.404 Sum_probs=217.7
Q ss_pred CCCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCccc-ChhhHHHHHHHHHHHHhcC-CCCccccceeecCCCcCC
Q 007541 21 EGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFE-HVSDATRILREIKLLRLLR-HPDIVEIKHILLPPSRRE 98 (599)
Q Consensus 21 ~~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~-~~~~~~~i~rEi~iL~~l~-HpnIv~l~~v~~~~s~~~ 98 (599)
....|..+.+||+|+||.|.+|..+.|.+.+|||++++..- ...+.+-...|-++|.... -|.++.|+.+|. .
T Consensus 347 ~~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQ-----T 421 (683)
T KOG0696|consen 347 KATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQ-----T 421 (683)
T ss_pred eecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhh-----h
Confidence 35678899999999999999999999999999999986332 2234445557888887764 678999998884 4
Q ss_pred CccEEEEEecCC-cCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCcccccc
Q 007541 99 FKDIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAF 177 (599)
Q Consensus 99 ~~~iylV~E~~~-g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~ 177 (599)
...+|+||||+. |+|--.|++-+++.|.++.+++..|+-||-+||++||+.||||.+|||++.+|++||+|||+++..-
T Consensus 422 mDRLyFVMEyvnGGDLMyhiQQ~GkFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni 501 (683)
T KOG0696|consen 422 MDRLYFVMEYVNGGDLMYHIQQVGKFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENI 501 (683)
T ss_pred hhheeeEEEEecCchhhhHHHHhcccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEeccCCceEeeecccccccc
Confidence 457999999999 6999999999999999999999999999999999999999999999999999999999999997532
Q ss_pred CCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHH
Q 007541 178 NDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIAR 257 (599)
Q Consensus 178 ~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~ 257 (599)
.+.. .-.+.|||+.|+|||++.- ..|+.++|.||+|++|||||.|.+||.|.+..+.++.|.+---
T Consensus 502 ~~~~---TTkTFCGTPdYiAPEIi~Y--qPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI~ehnv--------- 567 (683)
T KOG0696|consen 502 FDGV---TTKTFCGTPDYIAPEIIAY--QPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAIMEHNV--------- 567 (683)
T ss_pred cCCc---ceeeecCCCcccccceEEe--cccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHccC---------
Confidence 2221 1246799999999999976 7899999999999999999999999999998888777753111
Q ss_pred HhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHH
Q 007541 258 VCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLER 337 (599)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~ 337 (599)
.....+|.+|.++.+.
T Consensus 568 ----------------------------------------------------------------syPKslSkEAv~ickg 583 (683)
T KOG0696|consen 568 ----------------------------------------------------------------SYPKSLSKEAVAICKG 583 (683)
T ss_pred ----------------------------------------------------------------cCcccccHHHHHHHHH
Confidence 0113478899999999
Q ss_pred hcccCCCCCCC-----HHHHhcCccccCc
Q 007541 338 MLAFEPKDRPT-----AEEALADPYFKGL 361 (599)
Q Consensus 338 mL~~DP~~RpT-----a~e~L~HP~f~~~ 361 (599)
+|...|.+|.. -.++-+||||+.+
T Consensus 584 ~ltK~P~kRLGcg~~ge~di~~H~FFR~i 612 (683)
T KOG0696|consen 584 LLTKHPGKRLGCGPEGERDIREHPFFRRI 612 (683)
T ss_pred HhhcCCccccCCCCccccchhhCcchhhc
Confidence 99999999975 4689999999975
No 367
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-37 Score=324.43 Aligned_cols=259 Identities=22% Similarity=0.378 Sum_probs=224.4
Q ss_pred CCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcc-cChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCc
Q 007541 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIF-EHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFK 100 (599)
Q Consensus 22 ~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~-~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~ 100 (599)
-...+++..||-|+||.|=++........+|+|++++.. -.....+.+..|-+||..++.|.||+|+..| ++..
T Consensus 419 l~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTf-----rd~k 493 (732)
T KOG0614|consen 419 LSDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTF-----RDSK 493 (732)
T ss_pred hhhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHh-----ccch
Confidence 356778899999999999999876666679999997533 3344567889999999999999999999998 6667
Q ss_pred cEEEEEecCC-cCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCC
Q 007541 101 DIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFND 179 (599)
Q Consensus 101 ~iylV~E~~~-g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~ 179 (599)
++||+||-|- |+|+.+++..+.+.+..+++++..+++|+.|||++|||.|||||+|+|++.+|-+||.|||+|+...++
T Consensus 494 yvYmLmEaClGGElWTiLrdRg~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g 573 (732)
T KOG0614|consen 494 YVYMLMEACLGGELWTILRDRGSFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSG 573 (732)
T ss_pred hhhhhHHhhcCchhhhhhhhcCCcccchhhhhHHHHHHHHHHHHhcCceeccCChhheeeccCCceEEeehhhHHHhccC
Confidence 9999999977 699999999999999999999999999999999999999999999999999999999999999988665
Q ss_pred CCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHh
Q 007541 180 TPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVC 259 (599)
Q Consensus 180 ~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~ 259 (599)
..+ -+.|||+.|.|||+++. ...+.++|.||||+++||||+|.+||.+.+....++.|.+-+...
T Consensus 574 ~KT----wTFcGTpEYVAPEIILn--KGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkGid~i--------- 638 (732)
T KOG0614|consen 574 RKT----WTFCGTPEYVAPEIILN--KGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKGIDKI--------- 638 (732)
T ss_pred Cce----eeecCCcccccchhhhc--cCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhhhhhh---------
Confidence 443 35699999999999987 688999999999999999999999999999988888886532100
Q ss_pred hhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHhc
Q 007541 260 LLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERML 339 (599)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL 339 (599)
.....++..+.+||+++.
T Consensus 639 --------------------------------------------------------------~~Pr~I~k~a~~Lik~LC 656 (732)
T KOG0614|consen 639 --------------------------------------------------------------EFPRRITKTATDLIKKLC 656 (732)
T ss_pred --------------------------------------------------------------hcccccchhHHHHHHHHH
Confidence 001235667999999999
Q ss_pred ccCCCCCCC-----HHHHhcCccccCcc
Q 007541 340 AFEPKDRPT-----AEEALADPYFKGLA 362 (599)
Q Consensus 340 ~~DP~~RpT-----a~e~L~HP~f~~~~ 362 (599)
..+|.+|.. +.|+-.|-||.++.
T Consensus 657 r~~P~ERLG~~~~gI~DIkkH~Wf~gfd 684 (732)
T KOG0614|consen 657 RDNPTERLGYQKGGINDIKKHRWFEGFD 684 (732)
T ss_pred hcCcHhhhccccCChHHHHhhhhhhcCC
Confidence 999999986 99999999999863
No 368
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=100.00 E-value=1.3e-36 Score=313.11 Aligned_cols=301 Identities=28% Similarity=0.441 Sum_probs=224.4
Q ss_pred CCCceEEEEEEeecCceEEEEEEECC---CCcEEEEEEecCcccChhhHHHHHHHHHHHHhcC-CCCccccceeecCCCc
Q 007541 21 EGSRYKIEEVIGKGSYGVVCSAYDTR---TGEKVAIKKINDIFEHVSDATRILREIKLLRLLR-HPDIVEIKHILLPPSR 96 (599)
Q Consensus 21 ~~~rY~i~~~LG~G~~g~V~~a~d~~---tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~-HpnIv~l~~v~~~~s~ 96 (599)
..+.|.++++||.|+|++||+|.+.. .++.||+|.|.. .+...++.+|+.+|..+. +.||+++.+++
T Consensus 34 ~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~----ts~p~ri~~El~~L~~~gG~~ni~~~~~~~----- 104 (418)
T KOG1167|consen 34 ISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYR----TSSPSRILNELEMLYRLGGSDNIIKLNGCF----- 104 (418)
T ss_pred hhhhhhhhccccccchhhhhhhhHhhhccccceEeeeeccc----ccCchHHHHHHHHHHHhccchhhhcchhhh-----
Confidence 46789999999999999999999988 789999999864 355678999999999996 99999999998
Q ss_pred CCCccEEEEEecCCc-CHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCC-CceeeeccCccc
Q 007541 97 REFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANAD-CKLKICDFGLAR 174 (599)
Q Consensus 97 ~~~~~iylV~E~~~g-~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~-~~lKL~DFGlA~ 174 (599)
+....+++|+||++. +..++.. .++...++.+++.++.||+++|.+|||||||||.|+|.+.. ++-.|+|||||.
T Consensus 105 rnnd~v~ivlp~~~H~~f~~l~~---~l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~ 181 (418)
T KOG1167|consen 105 RNNDQVAIVLPYFEHDRFRDLYR---SLSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSNFLYNRRTQRGVLVDFGLAQ 181 (418)
T ss_pred ccCCeeEEEecccCccCHHHHHh---cCCHHHHHHHHHHHHHHhhhhhccCccccCCCccccccccccCCceEEechhHH
Confidence 566789999999996 5555554 37789999999999999999999999999999999999864 778999999997
Q ss_pred cccCC--------------C-----------------CC----------cccccccccCccccCccccccccCCCCcchh
Q 007541 175 VAFND--------------T-----------------PT----------AIFWTDYVATRWYRAPELCGSFFSKYTPAID 213 (599)
Q Consensus 175 ~~~~~--------------~-----------------~~----------~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~D 213 (599)
..... . +. ....-...||+.|||||++..+ ...++++|
T Consensus 182 ~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~-~~QttaiD 260 (418)
T KOG1167|consen 182 RYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRC-PRQTTAID 260 (418)
T ss_pred HHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhc-cCcCCccc
Confidence 21000 0 00 0011246799999999999875 68899999
Q ss_pred hHhHHHHHHHHHhCCCC-CCCCChhhHHHHHHHhcCCCCHHHHHHHhhhhhh--hhcCCCCCcccCCCccchhhhhhhhh
Q 007541 214 IWSIGCIFAELLTGKPL-FPGKNVVHQLDIMTDLLGTPSPEAIARVCLLLNI--IWCGYDGFMCSVAPSCFLVFAIFFFF 290 (599)
Q Consensus 214 IWSlG~Il~eLltG~~p-F~g~~~~~~l~~I~~~lG~p~~e~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (599)
|||.|+|+..+++++.| |...++.+.+.+|..++|.-... ++..+... .|..-. + +..
T Consensus 261 iws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mr---k~A~l~g~~~l~~ksn--~--------------~~~ 321 (418)
T KOG1167|consen 261 IWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMR---KCAALPGRILLWQKSN--I--------------PTI 321 (418)
T ss_pred eeeccceeehhhccccccccCccccchHHHHHHHhChHHHH---HHhhcCCceeeecccc--c--------------ccc
Confidence 99999999999999855 56778899999999999865443 33333333 333200 0 000
Q ss_pred HHHHHHhhhcccHHHHHH-HHhcccCCC--CCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccccCc
Q 007541 291 TEVLILHCQVRNEKARRY-LSSMRKKKP--IPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGL 361 (599)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~s~~a~dLL~~mL~~DP~~RpTa~e~L~HP~f~~~ 361 (599)
.+....+ +.. +..+.+... ..........+..+.|||.+||..||.+|+||+|+|.||||...
T Consensus 322 ~e~~~~f--------~s~~~~~~~~~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkHpFF~~~ 387 (418)
T KOG1167|consen 322 PELRVNF--------ETLHIESIYKSRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKHPFFDEA 387 (418)
T ss_pred HHHHhch--------hccChhhcccccccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcCcCCcch
Confidence 0110000 000 111111111 11111223356689999999999999999999999999999954
No 369
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=2.2e-35 Score=299.65 Aligned_cols=250 Identities=27% Similarity=0.464 Sum_probs=198.5
Q ss_pred ceEEEEEEeecCceEEEEEEECC-CCcEEEEEEecCcc--------cChhhHHHHHHHHHHHHh-cCCCCccccceeecC
Q 007541 24 RYKIEEVIGKGSYGVVCSAYDTR-TGEKVAIKKINDIF--------EHVSDATRILREIKLLRL-LRHPDIVEIKHILLP 93 (599)
Q Consensus 24 rY~i~~~LG~G~~g~V~~a~d~~-tg~~vAIK~i~~~~--------~~~~~~~~i~rEi~iL~~-l~HpnIv~l~~v~~~ 93 (599)
.|++.+.||+|+||.||+|.+.. +++.+|+|.+.... ........+.+|+.+++. ++|+||+++++++..
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 38889999999999999999988 78999999886321 122334567789998765 789999999999843
Q ss_pred CCcCCCccEEEEEecCC-cCHHHHHHh----CCCCCHHHHHHHHHHHHhhhhhccc-CceEeecCCCCcEEeCCCCceee
Q 007541 94 PSRREFKDIYVVFELME-SDLHQVIKA----NDDLTPEHYQFFLYQLLRGLKYIHT-ANVFHRDLKPKNILANADCKLKI 167 (599)
Q Consensus 94 ~s~~~~~~iylV~E~~~-g~L~~~i~~----~~~lse~~i~~i~~QLl~aL~yLHs-~gIvHrDLKP~NILv~~~~~lKL 167 (599)
..++|+||||+. ++|.+++.. ...+++..++.++.||+.||.|||+ .||+|+||||+|||++.++.+||
T Consensus 81 -----~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~~~~~~~l 155 (269)
T cd08528 81 -----NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLGEDDKVTI 155 (269)
T ss_pred -----CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEECCCCcEEE
Confidence 357999999998 488887743 3468999999999999999999996 78999999999999999999999
Q ss_pred eccCccccccCCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhc
Q 007541 168 CDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLL 247 (599)
Q Consensus 168 ~DFGlA~~~~~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~l 247 (599)
+|||++....... ......++..|+|||.+.+ ..++.++|+|||||++++|++|++||...+.......+....
T Consensus 156 ~dfg~~~~~~~~~----~~~~~~~~~~~~~Pe~~~~--~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~ 229 (269)
T cd08528 156 TDFGLAKQKQPES----KLTSVVGTILYSCPEIVKN--EPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSLATKIVEAV 229 (269)
T ss_pred ecccceeeccccc----ccccccCcccCcChhhhcC--CCCchHHHHHHHHHHHHHHHhCCCcccccCHHHHHHHHhhcc
Confidence 9999998653322 2345578889999999876 568999999999999999999999997655433322221100
Q ss_pred CCCCHHHHHHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCC
Q 007541 248 GTPSPEAIARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNA 327 (599)
Q Consensus 248 G~p~~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (599)
.. +.. ....
T Consensus 230 ~~---------------------------------------------------------------------~~~--~~~~ 238 (269)
T cd08528 230 YE---------------------------------------------------------------------PLP--EGMY 238 (269)
T ss_pred CC---------------------------------------------------------------------cCC--cccC
Confidence 00 000 1235
Q ss_pred CHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 007541 328 NPLALRLLERMLAFEPKDRPTAEEALAD 355 (599)
Q Consensus 328 s~~a~dLL~~mL~~DP~~RpTa~e~L~H 355 (599)
++.+.+||.+||+.||.+|||+.|+.++
T Consensus 239 ~~~l~~li~~cl~~~p~~Rp~~~e~~~~ 266 (269)
T cd08528 239 SEDVTDVITSCLTPDAEARPDIIQVSAM 266 (269)
T ss_pred CHHHHHHHHHHCCCCCccCCCHHHHHHH
Confidence 6789999999999999999999999764
No 370
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=1.1e-35 Score=301.55 Aligned_cols=245 Identities=27% Similarity=0.399 Sum_probs=191.9
Q ss_pred EEEeecCceEEEEEEECCCC------cEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccE
Q 007541 29 EVIGKGSYGVVCSAYDTRTG------EKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDI 102 (599)
Q Consensus 29 ~~LG~G~~g~V~~a~d~~tg------~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~i 102 (599)
+.||+|+||.||+|.++... +.||||.+.... .......+.+|+.+|+.++||||+++++++... ...
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~ 74 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGA-TDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLN-----EPQ 74 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhccc-chhhHHHHHHHHHHHHhcCCCCeeeEeeeecCC-----CCe
Confidence 36899999999999886544 789999886432 123455788999999999999999999998543 368
Q ss_pred EEEEecCC-cCHHHHHHhC-------CCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCC-----ceeeec
Q 007541 103 YVVFELME-SDLHQVIKAN-------DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADC-----KLKICD 169 (599)
Q Consensus 103 ylV~E~~~-g~L~~~i~~~-------~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~-----~lKL~D 169 (599)
|+||||+. ++|.+++... ..+++..+..++.||+.||+|||+++++|+||||+|||++.++ .+||+|
T Consensus 75 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~~~~~l~d 154 (269)
T cd05044 75 YIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGD 154 (269)
T ss_pred EEEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCCCCCcceEECC
Confidence 99999998 6999998642 3478899999999999999999999999999999999999887 899999
Q ss_pred cCccccccCCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHh-CCCCCCCCChhhHHHHHHHhcC
Q 007541 170 FGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLLG 248 (599)
Q Consensus 170 FGlA~~~~~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLlt-G~~pF~g~~~~~~l~~I~~~lG 248 (599)
||+++......... ......++..|+|||++.. ..++.++|||||||++|+|++ |+.||...+..+....+...
T Consensus 155 fg~~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~--~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~-- 229 (269)
T cd05044 155 FGLARDIYKSDYYR-KEGEGLLPVRWMAPESLLD--GKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEVLQHVTAG-- 229 (269)
T ss_pred cccccccccccccc-cCcccCCCccccCHHHHcc--CCcccchhHHHHHHHHHHHHHcCCCCCcccCHHHHHHHHhcC--
Confidence 99997653322111 1122345678999999876 578999999999999999998 99999876544333222100
Q ss_pred CCCHHHHHHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCC
Q 007541 249 TPSPEAIARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNAN 328 (599)
Q Consensus 249 ~p~~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 328 (599)
.. .......+
T Consensus 230 -------------------------------------------------------------------~~---~~~~~~~~ 239 (269)
T cd05044 230 -------------------------------------------------------------------GR---LQKPENCP 239 (269)
T ss_pred -------------------------------------------------------------------Cc---cCCcccch
Confidence 00 01113456
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHhc
Q 007541 329 PLALRLLERMLAFEPKDRPTAEEALA 354 (599)
Q Consensus 329 ~~a~dLL~~mL~~DP~~RpTa~e~L~ 354 (599)
..+.+||.+||..+|.+|||+.++++
T Consensus 240 ~~~~~li~~~l~~~p~~Rp~~~~i~~ 265 (269)
T cd05044 240 DKIYQLMTNCWAQDPSERPTFDRIQE 265 (269)
T ss_pred HHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 78999999999999999999999875
No 371
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=1.5e-35 Score=298.20 Aligned_cols=190 Identities=19% Similarity=0.274 Sum_probs=158.5
Q ss_pred EEEeecCceEEEEEEECCCC----------cEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCC
Q 007541 29 EVIGKGSYGVVCSAYDTRTG----------EKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRRE 98 (599)
Q Consensus 29 ~~LG~G~~g~V~~a~d~~tg----------~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~ 98 (599)
+.||+|+||.||+|.+..++ ..|++|.+.... .....+.+|+.+|+.++|+||+++++++..
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~----- 72 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDH---RDSLAFFETASLMSQLSHKHLVKLYGVCVR----- 72 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccch---hhHHHHHHHHHHHHcCCCcchhheeeEEec-----
Confidence 46899999999999998877 458888765321 125678899999999999999999998854
Q ss_pred CccEEEEEecCC-cCHHHHHHhCC-CCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCC-------ceeeec
Q 007541 99 FKDIYVVFELME-SDLHQVIKAND-DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADC-------KLKICD 169 (599)
Q Consensus 99 ~~~iylV~E~~~-g~L~~~i~~~~-~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~-------~lKL~D 169 (599)
...|+||||+. ++|.+++.... .+++..+..++.||+.||+|||++||+||||||+|||++.++ .+||+|
T Consensus 73 -~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~D 151 (259)
T cd05037 73 -DENIMVEEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSD 151 (259)
T ss_pred -CCcEEEEEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCccccCCceeEEeCC
Confidence 24699999999 69999998765 789999999999999999999999999999999999999887 799999
Q ss_pred cCccccccCCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHh-CCCCCCCC
Q 007541 170 FGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGK 234 (599)
Q Consensus 170 FGlA~~~~~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLlt-G~~pF~g~ 234 (599)
||++...... ....++..|+|||++.+....++.++||||+||++++|++ |..+|...
T Consensus 152 fg~a~~~~~~-------~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~ 210 (259)
T cd05037 152 PGIPITVLSR-------EERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTL 210 (259)
T ss_pred CCcccccccc-------cccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccC
Confidence 9999765321 1235667799999987622378899999999999999999 46667554
No 372
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=1.6e-35 Score=303.03 Aligned_cols=191 Identities=19% Similarity=0.259 Sum_probs=154.5
Q ss_pred EEeecCceEEEEEEECCC------------------------CcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCcc
Q 007541 30 VIGKGSYGVVCSAYDTRT------------------------GEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIV 85 (599)
Q Consensus 30 ~LG~G~~g~V~~a~d~~t------------------------g~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv 85 (599)
.||+|+||.||+|....+ ...||+|++... .......+.+|+.+++.++||||+
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~--~~~~~~~~~~~~~~~~~l~h~niv 79 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPS--HRDIALAFFETASLMSQVSHIHLA 79 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChH--HHHHHHHHHHHHHHHhcCCCCCee
Confidence 599999999999974322 245899988642 223345678899999999999999
Q ss_pred ccceeecCCCcCCCccEEEEEecCC-cCHHHHHHh-CCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCC
Q 007541 86 EIKHILLPPSRREFKDIYVVFELME-SDLHQVIKA-NDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADC 163 (599)
Q Consensus 86 ~l~~v~~~~s~~~~~~iylV~E~~~-g~L~~~i~~-~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~ 163 (599)
++++++... ...|+||||++ ++|..++.. .+.+++..+..++.||++||+|||++||+||||||+|||++.++
T Consensus 80 ~~~~~~~~~-----~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~~ 154 (274)
T cd05076 80 FVHGVCVRG-----SENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLARLG 154 (274)
T ss_pred eEEEEEEeC-----CceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEeccC
Confidence 999998543 46899999999 588888865 45789999999999999999999999999999999999997653
Q ss_pred -------ceeeeccCccccccCCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHH-hCCCCCCCCC
Q 007541 164 -------KLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELL-TGKPLFPGKN 235 (599)
Q Consensus 164 -------~lKL~DFGlA~~~~~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLl-tG~~pF~g~~ 235 (599)
.+||+|||++...... ....++..|+|||.+... ..++.++|||||||++|+|+ +|+.||.+..
T Consensus 155 ~~~~~~~~~kl~d~g~~~~~~~~-------~~~~~~~~~~aPe~~~~~-~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~ 226 (274)
T cd05076 155 LAEGTSPFIKLSDPGVSFTALSR-------EERVERIPWIAPECVPGG-NSLSTAADKWSFGTTLLEICFDGEVPLKERT 226 (274)
T ss_pred cccCccceeeecCCccccccccc-------cccccCCcccCchhhcCC-CCCCcHHHHHHHHHHHHHHHhCCCCCccccC
Confidence 3899999998643221 123567789999988542 56899999999999999985 6899987654
No 373
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=1.2e-34 Score=295.17 Aligned_cols=204 Identities=22% Similarity=0.342 Sum_probs=158.3
Q ss_pred EEeecCceEEEEEEECCC--CcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEEEEEe
Q 007541 30 VIGKGSYGVVCSAYDTRT--GEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVVFE 107 (599)
Q Consensus 30 ~LG~G~~g~V~~a~d~~t--g~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~iylV~E 107 (599)
.||+|+||+||++..... ...+++|.+.... .......+.+|+.+++.++||||+++++.+... ..+|+|||
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~-----~~~~lv~e 75 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANA-SSKEQNEFLQQGDPYRILQHPNILQCLGQCVEA-----IPYLLVFE 75 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCC-ChHHHHHHHHHHHHHhccCCcchhheEEEecCC-----CccEEEEe
Confidence 599999999999975433 3456777765322 223456788999999999999999999998543 46899999
Q ss_pred cCC-cCHHHHHHhC----CCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCCCCC
Q 007541 108 LME-SDLHQVIKAN----DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPT 182 (599)
Q Consensus 108 ~~~-g~L~~~i~~~----~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~~~ 182 (599)
|+. ++|.+++... ..+++..++.++.||+.||+|||+.+|+||||||+|||++.++.+||+|||++........
T Consensus 76 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~- 154 (268)
T cd05086 76 YCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDY- 154 (268)
T ss_pred cCCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEEcCCccEEecccccccccCcchh-
Confidence 999 6999999754 2466778899999999999999999999999999999999999999999999864321111
Q ss_pred cccccccccCccccCccccccc-----cCCCCcchhhHhHHHHHHHHHh-CCCCCCCCChhhHH
Q 007541 183 AIFWTDYVATRWYRAPELCGSF-----FSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQL 240 (599)
Q Consensus 183 ~~~~t~~~gt~~Y~APE~l~~~-----~~~ys~~~DIWSlG~Il~eLlt-G~~pF~g~~~~~~l 240 (599)
.......+++..|+|||++... ...++.++||||+||++++|++ |.+||...+..+.+
T Consensus 155 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~ 218 (268)
T cd05086 155 IETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVL 218 (268)
T ss_pred hhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHH
Confidence 0111245678899999987531 1246789999999999999997 57788765544433
No 374
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.8e-37 Score=313.10 Aligned_cols=274 Identities=27% Similarity=0.425 Sum_probs=214.6
Q ss_pred cccccCCCCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCccc-----ChhhHHHHHHHHHHHHhcCCCCccccce
Q 007541 15 FFTEYGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFE-----HVSDATRILREIKLLRLLRHPDIVEIKH 89 (599)
Q Consensus 15 ~~~~~~~~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~-----~~~~~~~i~rEi~iL~~l~HpnIv~l~~ 89 (599)
|-+.-..++||.++.+||+|+|+.||+|.|....+.||+|+-..... .....+..-||..|-+.|.||.||++++
T Consensus 455 FkDHptLn~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYD 534 (775)
T KOG1151|consen 455 FKDHPTLNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYD 534 (775)
T ss_pred hccCcchHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeee
Confidence 44455678999999999999999999999999999999997532111 1222345679999999999999999999
Q ss_pred eecCCCcCCCccEEEEEecCCc-CHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCc--eEeecCCCCcEEeCC---CC
Q 007541 90 ILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTAN--VFHRDLKPKNILANA---DC 163 (599)
Q Consensus 90 v~~~~s~~~~~~iylV~E~~~g-~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~g--IvHrDLKP~NILv~~---~~ 163 (599)
+|..+. ..+|-|+|||+| ||.=+++.+.-+++.+++.|+.||+.||.||.... |||-||||.|||+.. -|
T Consensus 535 yfslDt----dsFCTVLEYceGNDLDFYLKQhklmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacG 610 (775)
T KOG1151|consen 535 YFSLDT----DSFCTVLEYCEGNDLDFYLKQHKLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACG 610 (775)
T ss_pred eeeecc----ccceeeeeecCCCchhHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccc
Confidence 996543 368999999997 78889999999999999999999999999999875 999999999998753 37
Q ss_pred ceeeeccCccccccCCCCC---ccccc-ccccCccccCcccc--ccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChh
Q 007541 164 KLKICDFGLARVAFNDTPT---AIFWT-DYVATRWYRAPELC--GSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVV 237 (599)
Q Consensus 164 ~lKL~DFGlA~~~~~~~~~---~~~~t-~~~gt~~Y~APE~l--~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~ 237 (599)
.+||+||||++....+... ...+| ...||.||++||.+ +....+.+.++||||+|||||.+|.|+.||......
T Consensus 611 eIKITDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQ 690 (775)
T KOG1151|consen 611 EIKITDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQ 690 (775)
T ss_pred eeEeeecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhH
Confidence 8999999999987554332 22223 45799999999964 333367889999999999999999999999754321
Q ss_pred -hHHHHHHHhcCCCCHHHHHHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCC
Q 007541 238 -HQLDIMTDLLGTPSPEAIARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKK 316 (599)
Q Consensus 238 -~~l~~I~~~lG~p~~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (599)
+.++. .. +.+..
T Consensus 691 QdILqe---------------------------------------------------------------NT----IlkAt 703 (775)
T KOG1151|consen 691 QDILQE---------------------------------------------------------------NT----ILKAT 703 (775)
T ss_pred HHHHhh---------------------------------------------------------------hc----hhcce
Confidence 11110 00 00000
Q ss_pred CCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccccC
Q 007541 317 PIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKG 360 (599)
Q Consensus 317 ~~~~~~~~~~~s~~a~dLL~~mL~~DP~~RpTa~e~L~HP~f~~ 360 (599)
.+.|. .-|-++++|++||++||++--++|+.+.++-.||||.-
T Consensus 704 EVqFP-~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~dpyllP 746 (775)
T KOG1151|consen 704 EVQFP-PKPVVSSEAKAFIRRCLAYRKEDRIDVQQLACDPYLLP 746 (775)
T ss_pred eccCC-CCCccCHHHHHHHHHHHHhhhhhhhhHHHHccCccccc
Confidence 11111 12458899999999999999999999999999999963
No 375
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.9e-35 Score=323.21 Aligned_cols=265 Identities=24% Similarity=0.436 Sum_probs=218.2
Q ss_pred CCCCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcC-CCCccccceeecCCCcCC
Q 007541 20 GEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLR-HPDIVEIKHILLPPSRRE 98 (599)
Q Consensus 20 ~~~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~-HpnIv~l~~v~~~~s~~~ 98 (599)
...+.|+|.++||.|.||.||++.++++|+.+|||+..... ...+.+..|.++|+.+. |||++.++++|.-.....
T Consensus 16 dp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~---d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~ 92 (953)
T KOG0587|consen 16 DPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTE---DEEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGN 92 (953)
T ss_pred CCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCc---cccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCC
Confidence 45788999999999999999999999999999999986533 23345668999998885 999999999997655566
Q ss_pred CccEEEEEecCC-cCHHHHHHh--CCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCcccc
Q 007541 99 FKDIYVVFELME-SDLHQVIKA--NDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARV 175 (599)
Q Consensus 99 ~~~iylV~E~~~-g~L~~~i~~--~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~ 175 (599)
.+.++||||||+ |+.-++++. ..++.|+.+.+|++.++.||.|||.+.++|||||-.|||++.++.|||+|||++..
T Consensus 93 ~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLLT~e~~VKLvDFGvSaQ 172 (953)
T KOG0587|consen 93 GDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLLTENAEVKLVDFGVSAQ 172 (953)
T ss_pred CCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEEeccCcEEEeeeeeeee
Confidence 679999999999 688888865 45799999999999999999999999999999999999999999999999999976
Q ss_pred ccCCCCCcccccccccCccccCccccccc---cCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCH
Q 007541 176 AFNDTPTAIFWTDYVATRWYRAPELCGSF---FSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSP 252 (599)
Q Consensus 176 ~~~~~~~~~~~t~~~gt~~Y~APE~l~~~---~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~ 252 (599)
... +...-.+.+||+.|||||+|... ...|+..+|+||||++..||.-|.||+-+......+.+| --.|++
T Consensus 173 lds---T~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmraLF~I---pRNPPP 246 (953)
T KOG0587|consen 173 LDS---TVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRALFLI---PRNPPP 246 (953)
T ss_pred eec---ccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhhhccC---CCCCCc
Confidence 532 22223567999999999998542 135778899999999999999999999776554433332 122222
Q ss_pred HHHHHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHH
Q 007541 253 EAIARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLAL 332 (599)
Q Consensus 253 e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~ 332 (599)
. .......+..+.
T Consensus 247 k-------------------------------------------------------------------Lkrp~kWs~~Fn 259 (953)
T KOG0587|consen 247 K-------------------------------------------------------------------LKRPKKWSKKFN 259 (953)
T ss_pred c-------------------------------------------------------------------ccchhhHHHHHH
Confidence 1 112234667899
Q ss_pred HHHHHhcccCCCCCCCHHHHhcCccccC
Q 007541 333 RLLERMLAFEPKDRPTAEEALADPYFKG 360 (599)
Q Consensus 333 dLL~~mL~~DP~~RpTa~e~L~HP~f~~ 360 (599)
|||..||..|-.+||+..++|.|||++.
T Consensus 260 dFIs~cL~Kd~e~RP~~~~ll~hpFi~e 287 (953)
T KOG0587|consen 260 DFISTCLVKDYEQRPSTEELLKHPFITE 287 (953)
T ss_pred HHHHHHHhhccccCcchhhhccCCcccc
Confidence 9999999999999999999999999983
No 376
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=4.4e-36 Score=316.12 Aligned_cols=185 Identities=31% Similarity=0.502 Sum_probs=163.0
Q ss_pred EEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEEEEEe
Q 007541 28 EEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVVFE 107 (599)
Q Consensus 28 ~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~iylV~E 107 (599)
++-||+|+.|-||+++. .++.||||+++.. + ..+|+-|++|+|+||+.+++|+... ..+|||||
T Consensus 129 LeWlGSGaQGAVF~Grl--~netVAVKKV~el-------k--ETdIKHLRkLkH~NII~FkGVCtqs-----PcyCIiME 192 (904)
T KOG4721|consen 129 LEWLGSGAQGAVFLGRL--HNETVAVKKVREL-------K--ETDIKHLRKLKHPNIITFKGVCTQS-----PCYCIIME 192 (904)
T ss_pred hhhhccCcccceeeeec--cCceehhHHHhhh-------h--hhhHHHHHhccCcceeeEeeeecCC-----ceeEEeee
Confidence 56799999999999964 5889999998531 1 2578889999999999999999433 47999999
Q ss_pred cCC-cCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCCCCCcccc
Q 007541 108 LME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFW 186 (599)
Q Consensus 108 ~~~-g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~~~~~~~ 186 (599)
||. |-|..++++...++......+..+|+.|+.|||.+.|||||||.-||||..+..|||+|||-++..... .+ .
T Consensus 193 fCa~GqL~~VLka~~~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~-ST---k 268 (904)
T KOG4721|consen 193 FCAQGQLYEVLKAGRPITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILISYDDVVKISDFGTSKELSDK-ST---K 268 (904)
T ss_pred ccccccHHHHHhccCccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEeeccceEEeccccchHhhhhh-hh---h
Confidence 999 899999999999999999999999999999999999999999999999999999999999999865322 11 1
Q ss_pred cccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCC
Q 007541 187 TDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGK 234 (599)
Q Consensus 187 t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~ 234 (599)
-.++||..|||||+|.. ...+.++||||+||+|+|||||..||.+-
T Consensus 269 MSFaGTVaWMAPEvIrn--ePcsEKVDIwSfGVVLWEmLT~EiPYkdV 314 (904)
T KOG4721|consen 269 MSFAGTVAWMAPEVIRN--EPCSEKVDIWSFGVVLWEMLTGEIPYKDV 314 (904)
T ss_pred hhhhhhHhhhCHHHhhc--CCcccccceehhHHHHHHHHhcCCCcccc
Confidence 35689999999999987 78999999999999999999999999753
No 377
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-36 Score=296.18 Aligned_cols=262 Identities=24% Similarity=0.398 Sum_probs=209.4
Q ss_pred eEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHH-HHhcCCCCccccceeecCCCcCCCccEE
Q 007541 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKL-LRLLRHPDIVEIKHILLPPSRREFKDIY 103 (599)
Q Consensus 25 Y~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~i-L~~l~HpnIv~l~~v~~~~s~~~~~~iy 103 (599)
.+-+..||.|+||+|++..++.+|+..|||.|..... ..+..+++.|+.. |+.-+.||||+++++.+.+ ++.+
T Consensus 66 Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~-~keq~rll~e~d~~mks~~cp~IVkfyGa~F~E-----GdcW 139 (361)
T KOG1006|consen 66 LQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNI-EKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSE-----GDCW 139 (361)
T ss_pred HHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccc-hHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcC-----Ccee
Confidence 3446789999999999999999999999999975333 3456788899986 5666799999999998543 4789
Q ss_pred EEEecCCcCHHHHHH-----hCCCCCHHHHHHHHHHHHhhhhhcccC-ceEeecCCCCcEEeCCCCceeeeccCcccccc
Q 007541 104 VVFELMESDLHQVIK-----ANDDLTPEHYQFFLYQLLRGLKYIHTA-NVFHRDLKPKNILANADCKLKICDFGLARVAF 177 (599)
Q Consensus 104 lV~E~~~g~L~~~i~-----~~~~lse~~i~~i~~QLl~aL~yLHs~-gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~ 177 (599)
|.||+|+.+|..+.+ ....++|..+-.|.-..+.||.||... .|||||+||+|||++..|.+||||||.+....
T Consensus 140 iCMELMd~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv 219 (361)
T KOG1006|consen 140 ICMELMDISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDRHGDVKLCDFGICGQLV 219 (361)
T ss_pred eeHHHHhhhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEecCCCEeeecccchHhHH
Confidence 999999976655443 345799999999999999999999865 89999999999999999999999999997653
Q ss_pred CCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCCh-hhHHHHHHHhcCCCCHHHHH
Q 007541 178 NDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNV-VHQLDIMTDLLGTPSPEAIA 256 (599)
Q Consensus 178 ~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~-~~~l~~I~~~lG~p~~e~i~ 256 (599)
+.. ..+.-.|-+.|+|||-+......|+.++|+||||++|+|+.||+-|+.+.+. .+|+..+. .|.|+.
T Consensus 220 ~Si----AkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~Vv--~gdpp~---- 289 (361)
T KOG1006|consen 220 DSI----AKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQVV--IGDPPI---- 289 (361)
T ss_pred HHH----HhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHHHHHHHHHH--cCCCCe----
Confidence 322 2344578899999999976545699999999999999999999999987653 34443332 233321
Q ss_pred HHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHH
Q 007541 257 RVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLE 336 (599)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~ 336 (599)
..+....-+.+..++.||.
T Consensus 290 -------------------------------------------------------------l~~~~~~~~~s~~~~~fin 308 (361)
T KOG1006|consen 290 -------------------------------------------------------------LLFDKECVHYSFSMVRFIN 308 (361)
T ss_pred -------------------------------------------------------------ecCcccccccCHHHHHHHH
Confidence 0111112346788999999
Q ss_pred HhcccCCCCCCCHHHHhcCccccCccc
Q 007541 337 RMLAFEPKDRPTAEEALADPYFKGLAK 363 (599)
Q Consensus 337 ~mL~~DP~~RpTa~e~L~HP~f~~~~~ 363 (599)
-||..|-.+||...+++.+||++....
T Consensus 309 tCl~Kd~~~Rpky~~Lk~~~fyr~y~~ 335 (361)
T KOG1006|consen 309 TCLIKDRSDRPKYDDLKKFPFYRMYAV 335 (361)
T ss_pred HHhhcccccCcchhhhhcCchhhhhhh
Confidence 999999999999999999999987654
No 378
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.5e-35 Score=308.53 Aligned_cols=202 Identities=28% Similarity=0.466 Sum_probs=169.2
Q ss_pred CCCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCc
Q 007541 21 EGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFK 100 (599)
Q Consensus 21 ~~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~ 100 (599)
..+.|.-..+||+|+||.||+|.-.. |..||||++....... ...+.+|+.+|..++|||+|+|+++|.....
T Consensus 73 AT~~Fs~~~~ig~Ggfg~VYkG~l~~-~~~vAVK~~~~~~~~~--~~eF~~Ei~~ls~l~H~Nlv~LlGyC~e~~~---- 145 (361)
T KOG1187|consen 73 ATNNFSESNLIGEGGFGTVYKGVLSD-GTVVAVKRLSSNSGQG--EREFLNEVEILSRLRHPNLVKLLGYCLEGGE---- 145 (361)
T ss_pred HHhCCchhcceecCCCeEEEEEEECC-CCEEEEEEecCCCCcc--hhHHHHHHHHHhcCCCcCcccEEEEEecCCc----
Confidence 34677777899999999999998654 4899999887533221 4459999999999999999999999954321
Q ss_pred cEEEEEecCC-cCHHHHHHhCC--CCCHHHHHHHHHHHHhhhhhcccCc---eEeecCCCCcEEeCCCCceeeeccCccc
Q 007541 101 DIYVVFELME-SDLHQVIKAND--DLTPEHYQFFLYQLLRGLKYIHTAN---VFHRDLKPKNILANADCKLKICDFGLAR 174 (599)
Q Consensus 101 ~iylV~E~~~-g~L~~~i~~~~--~lse~~i~~i~~QLl~aL~yLHs~g---IvHrDLKP~NILv~~~~~lKL~DFGlA~ 174 (599)
+.+||+|||. |+|.+.+.... .+++.....|+.++++||+|||... ||||||||.|||+|++...||+|||+|+
T Consensus 146 ~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsDFGLa~ 225 (361)
T KOG1187|consen 146 HRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSDFGLAK 225 (361)
T ss_pred eEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccCccCcc
Confidence 5899999999 89999998654 7999999999999999999999965 9999999999999999999999999996
Q ss_pred cccCCCCCccccccc-ccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCC
Q 007541 175 VAFNDTPTAIFWTDY-VATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGK 234 (599)
Q Consensus 175 ~~~~~~~~~~~~t~~-~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~ 234 (599)
..... . ...... .||..|+|||.+.. ...+.++||||+|++|.||++|+.+....
T Consensus 226 ~~~~~-~--~~~~~~~~gt~gY~~PEy~~~--g~lt~KsDVySFGVvllElitgr~~~d~~ 281 (361)
T KOG1187|consen 226 LGPEG-D--TSVSTTVMGTFGYLAPEYAST--GKLTEKSDVYSFGVVLLELITGRKAVDQS 281 (361)
T ss_pred cCCcc-c--cceeeecCCCCccCChhhhcc--CCcCcccccccchHHHHHHHhCCcccCCC
Confidence 54321 1 111222 79999999999876 57899999999999999999999877643
No 379
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=3.9e-35 Score=324.71 Aligned_cols=249 Identities=27% Similarity=0.430 Sum_probs=204.8
Q ss_pred CceEEEEEEeecCceEEEEEEECC-----CCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcC
Q 007541 23 SRYKIEEVIGKGSYGVVCSAYDTR-----TGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRR 97 (599)
Q Consensus 23 ~rY~i~~~LG~G~~g~V~~a~d~~-----tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~ 97 (599)
..-+..+.||+|.||+||+|+-.. ....||||.++.... ......|.||+.+|..|+|||||+|++++ .
T Consensus 486 ~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~-~~~~~dF~REaeLla~l~H~nIVrLlGVC-----~ 559 (774)
T KOG1026|consen 486 SDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAE-NQARQDFRREAELLAELQHPNIVRLLGVC-----R 559 (774)
T ss_pred hheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhccccc-HHHHHHHHHHHHHHHhccCCCeEEEEEEE-----c
Confidence 455678999999999999997532 346799999985322 23456799999999999999999999999 4
Q ss_pred CCccEEEEEecCC-cCHHHHHHhCC----------C----CCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCC
Q 007541 98 EFKDIYVVFELME-SDLHQVIKAND----------D----LTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANAD 162 (599)
Q Consensus 98 ~~~~iylV~E~~~-g~L~~~i~~~~----------~----lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~ 162 (599)
+.+-+|||||||. |||+++++.+. . |+..+...|+.||+.|+.||-++.+|||||-..|+||.++
T Consensus 560 ~~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLVge~ 639 (774)
T KOG1026|consen 560 EGDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRNCLVGEN 639 (774)
T ss_pred cCCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhhceeccc
Confidence 4557999999999 89999997532 2 7888999999999999999999999999999999999999
Q ss_pred CceeeeccCccccccCCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHh-CCCCCCCCChhhHHH
Q 007541 163 CKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLD 241 (599)
Q Consensus 163 ~~lKL~DFGlA~~~~~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLlt-G~~pF~g~~~~~~l~ 241 (599)
..|||+|||++|-.-+...- .......-+..|||||.|.- .+|++++||||+||+|+|+++ |+.||.|-++.+.++
T Consensus 640 l~VKIsDfGLsRdiYssDYY-k~~~~t~lPIRWMppEsIly--~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~EVIe 716 (774)
T KOG1026|consen 640 LVVKISDFGLSRDIYSSDYY-KVRGNTLLPIRWMPPESILY--GKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEVIE 716 (774)
T ss_pred eEEEecccccchhhhhhhhh-cccCCceeeeecCCHHHhhc--CcccchhhhhhhhhhhhhhhccccCcccccchHHHHH
Confidence 99999999999865332211 01112345678999999876 799999999999999999998 999999988888777
Q ss_pred HHHHhcCCCCHHHHHHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCC
Q 007541 242 IMTDLLGTPSPEAIARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFS 321 (599)
Q Consensus 242 ~I~~~lG~p~~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (599)
.|.+-- ..
T Consensus 717 ~i~~g~------------------------------------------------------------------------lL 724 (774)
T KOG1026|consen 717 CIRAGQ------------------------------------------------------------------------LL 724 (774)
T ss_pred HHHcCC------------------------------------------------------------------------cc
Confidence 665310 01
Q ss_pred CCCCCCCHHHHHHHHHhcccCCCCCCCHHHH
Q 007541 322 QKFPNANPLALRLLERMLAFEPKDRPTAEEA 352 (599)
Q Consensus 322 ~~~~~~s~~a~dLL~~mL~~DP~~RpTa~e~ 352 (599)
+...+.+..+.+|+..|++-+|++|||+.||
T Consensus 725 ~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI 755 (774)
T KOG1026|consen 725 SCPENCPTEVYSLMLECWNENPKRRPSFKEI 755 (774)
T ss_pred cCCCCCCHHHHHHHHHHhhcCcccCCCHHHH
Confidence 1224678899999999999999999999997
No 380
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=100.00 E-value=7.5e-34 Score=312.37 Aligned_cols=278 Identities=18% Similarity=0.275 Sum_probs=187.8
Q ss_pred CCCceEEEEEEeecCceEEEEEEEC----------------CCCcEEEEEEecCcccCh------------hhHHHHHHH
Q 007541 21 EGSRYKIEEVIGKGSYGVVCSAYDT----------------RTGEKVAIKKINDIFEHV------------SDATRILRE 72 (599)
Q Consensus 21 ~~~rY~i~~~LG~G~~g~V~~a~d~----------------~tg~~vAIK~i~~~~~~~------------~~~~~i~rE 72 (599)
..++|++.++||+|+||+||+|.+. ..++.||||++....... ...+....|
T Consensus 143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE 222 (507)
T PLN03224 143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE 222 (507)
T ss_pred cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence 3679999999999999999999752 345689999986421110 011223357
Q ss_pred HHHHHhcCCCCc-----cccceeecCCC---cCCCccEEEEEecCC-cCHHHHHHhC-----------------------
Q 007541 73 IKLLRLLRHPDI-----VEIKHILLPPS---RREFKDIYVVFELME-SDLHQVIKAN----------------------- 120 (599)
Q Consensus 73 i~iL~~l~HpnI-----v~l~~v~~~~s---~~~~~~iylV~E~~~-g~L~~~i~~~----------------------- 120 (599)
+.++..++|.++ +++++++.... ..+....+|||||++ ++|.+++...
T Consensus 223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~ 302 (507)
T PLN03224 223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP 302 (507)
T ss_pred HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence 777777766554 66666664321 122346899999999 6898887632
Q ss_pred -CCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCCCCCcccccccccCccccCcc
Q 007541 121 -DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPE 199 (599)
Q Consensus 121 -~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~~~~~~~t~~~gt~~Y~APE 199 (599)
..+++..++.++.||+.+|.|||+.+|+||||||+|||++.++.+||+|||+++......... .....+|+.|+|||
T Consensus 303 ~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~--~~~g~~tp~Y~aPE 380 (507)
T PLN03224 303 QDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFN--PLYGMLDPRYSPPE 380 (507)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEECCCCcEEEEeCcCccccccCCccC--ccccCCCcceeChh
Confidence 123567789999999999999999999999999999999999999999999997543221111 11223478999999
Q ss_pred ccccccC------------------CCC--cchhhHhHHHHHHHHHhCCC-CCCCCChhhHHHHHHHhcCCCCHHHHHHH
Q 007541 200 LCGSFFS------------------KYT--PAIDIWSIGCIFAELLTGKP-LFPGKNVVHQLDIMTDLLGTPSPEAIARV 258 (599)
Q Consensus 200 ~l~~~~~------------------~ys--~~~DIWSlG~Il~eLltG~~-pF~g~~~~~~l~~I~~~lG~p~~e~i~~~ 258 (599)
++..... .|+ ..+||||+|||+++|++|.. +|.+....... + . .
T Consensus 381 ~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~--~-~-----------~- 445 (507)
T PLN03224 381 ELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTE--L-R-----------Q- 445 (507)
T ss_pred hhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhH--H-h-----------h-
Confidence 8753100 122 24799999999999999874 66432211100 0 0 0
Q ss_pred hhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHh
Q 007541 259 CLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERM 338 (599)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~m 338 (599)
. ......+ ... ......+. .+...++.++|||.+|
T Consensus 446 -----------------------------------------~-~~~~~~~-r~~-~~~~~~~~-~~d~~s~~~~dLi~~L 480 (507)
T PLN03224 446 -----------------------------------------Y-DNDLNRW-RMY-KGQKYDFS-LLDRNKEAGWDLACKL 480 (507)
T ss_pred -----------------------------------------c-cchHHHH-Hhh-cccCCCcc-cccccChHHHHHHHHH
Confidence 0 0000000 000 11112222 3566789999999999
Q ss_pred cccCC---CCCCCHHHHhcCccccC
Q 007541 339 LAFEP---KDRPTAEEALADPYFKG 360 (599)
Q Consensus 339 L~~DP---~~RpTa~e~L~HP~f~~ 360 (599)
|..+| .+|+|++|+|+||||..
T Consensus 481 L~~~~~~~~~RlSa~eaL~Hp~f~~ 505 (507)
T PLN03224 481 ITKRDQANRGRLSVGQALSHRFFLP 505 (507)
T ss_pred hccCCCCcccCCCHHHHhCCCCcCC
Confidence 99876 68999999999999963
No 381
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=100.00 E-value=1.8e-33 Score=277.70 Aligned_cols=242 Identities=39% Similarity=0.655 Sum_probs=196.7
Q ss_pred CceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEEEEEecCCc-CH
Q 007541 35 SYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVVFELMES-DL 113 (599)
Q Consensus 35 ~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~iylV~E~~~g-~L 113 (599)
+||.||+|.+..+|+.||+|++........ ...+.+|+..++.++|+||+++++.+... ...++|+|++++ +|
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~-~~~~~~e~~~~~~l~~~~i~~~~~~~~~~-----~~~~l~~e~~~~~~L 74 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKK-RERILREISILKKLKHPNIVRLYDVFEDE-----DKLYLVMEYCDGGDL 74 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccH-HHHHHHHHHHHHhCCCCcHHHHHhheeeC-----CEEEEEEeCCCCCCH
Confidence 589999999999999999999875332211 56788999999999999999999998543 478999999996 99
Q ss_pred HHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCCCCCcccccccccCc
Q 007541 114 HQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATR 193 (599)
Q Consensus 114 ~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~~~~~~~t~~~gt~ 193 (599)
..++.....++...+..++.+|+.+|.+||+.||+|+||+|.||+++.++.++|+|||.+....... ......++.
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~----~~~~~~~~~ 150 (244)
T smart00220 75 FDLLKKRGRLSEDEARFYARQILSALEYLHSNGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG----LLTTFVGTP 150 (244)
T ss_pred HHHHHhccCCCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEECCCCcEEEccccceeeecccc----ccccccCCc
Confidence 9999877669999999999999999999999999999999999999999999999999998764332 123456788
Q ss_pred cccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCC-ChhhHHHHHHHhcCCCCHHHHHHHhhhhhhhhcCCCCC
Q 007541 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGK-NVVHQLDIMTDLLGTPSPEAIARVCLLLNIIWCGYDGF 272 (599)
Q Consensus 194 ~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~-~~~~~l~~I~~~lG~p~~e~i~~~~~~~~~~~~~~~~~ 272 (599)
.|++||.+.. ..++.++||||+|+++++|++|..+|... +....+..+..
T Consensus 151 ~~~~pE~~~~--~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~~--------------------------- 201 (244)
T smart00220 151 EYMAPEVLLG--KGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIGK--------------------------- 201 (244)
T ss_pred CCCCHHHHcc--CCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhc---------------------------
Confidence 9999998875 57888999999999999999999999763 22221111110
Q ss_pred cccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHH
Q 007541 273 MCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEA 352 (599)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL~~DP~~RpTa~e~ 352 (599)
............+..+.+++.+||..||++||++.++
T Consensus 202 -------------------------------------------~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~ 238 (244)
T smart00220 202 -------------------------------------------PKPPFPPPEWKISPEAKDLIRKLLVKDPEKRLTAEEA 238 (244)
T ss_pred -------------------------------------------cCCCCccccccCCHHHHHHHHHHccCCchhccCHHHH
Confidence 0000111111166789999999999999999999999
Q ss_pred hcCccc
Q 007541 353 LADPYF 358 (599)
Q Consensus 353 L~HP~f 358 (599)
++||||
T Consensus 239 ~~~~~~ 244 (244)
T smart00220 239 LQHPFF 244 (244)
T ss_pred hhCCCC
Confidence 999997
No 382
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.8e-35 Score=289.86 Aligned_cols=200 Identities=24% Similarity=0.466 Sum_probs=175.9
Q ss_pred CceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcc-cChhhHHHHHHHHHHHHhc-CCCCccccceeecCCCcCCCc
Q 007541 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIF-EHVSDATRILREIKLLRLL-RHPDIVEIKHILLPPSRREFK 100 (599)
Q Consensus 23 ~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~-~~~~~~~~i~rEi~iL~~l-~HpnIv~l~~v~~~~s~~~~~ 100 (599)
+.|.++++||+|+|.+|.++++++|.+.+|+|++++.. ....+..-+..|-.+...- +||.+|.|+.+|.+.+
T Consensus 250 ~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtes----- 324 (593)
T KOG0695|consen 250 QDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTES----- 324 (593)
T ss_pred ccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccc-----
Confidence 78999999999999999999999999999999998643 3344555566777777665 5999999999996665
Q ss_pred cEEEEEecCC-cCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCC
Q 007541 101 DIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFND 179 (599)
Q Consensus 101 ~iylV~E~~~-g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~ 179 (599)
.+++|.||++ |+|.=.++...+|++++++++...|+-||.|||++|||.||||.+|+|++..|.+||+|+|.++.....
T Consensus 325 rlffvieyv~ggdlmfhmqrqrklpeeharfys~ei~lal~flh~rgiiyrdlkldnvlldaeghikltdygmcke~l~~ 404 (593)
T KOG0695|consen 325 RLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLGP 404 (593)
T ss_pred eEEEEEEEecCcceeeehhhhhcCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEEccCCceeecccchhhcCCCC
Confidence 6999999999 588877888889999999999999999999999999999999999999999999999999999754332
Q ss_pred CCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCC
Q 007541 180 TPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFP 232 (599)
Q Consensus 180 ~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~ 232 (599)
... ..+.|||+.|.|||++.+ ..|+..+|.|+||++++||+.|+.||.
T Consensus 405 gd~---tstfcgtpnyiapeilrg--eeygfsvdwwalgvlmfemmagrspfd 452 (593)
T KOG0695|consen 405 GDT---TSTFCGTPNYIAPEILRG--EEYGFSVDWWALGVLMFEMMAGRSPFD 452 (593)
T ss_pred Ccc---cccccCCCcccchhhhcc--cccCceehHHHHHHHHHHHHcCCCCcc
Confidence 222 256899999999999988 799999999999999999999999995
No 383
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-34 Score=310.18 Aligned_cols=256 Identities=23% Similarity=0.374 Sum_probs=205.4
Q ss_pred CceEEEEEEeecCceEEEEEEECCCCc---E-EEEEEecC-cccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcC
Q 007541 23 SRYKIEEVIGKGSYGVVCSAYDTRTGE---K-VAIKKIND-IFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRR 97 (599)
Q Consensus 23 ~rY~i~~~LG~G~~g~V~~a~d~~tg~---~-vAIK~i~~-~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~ 97 (599)
++-.+.++||+|+||.||+|.-+..+. . ||||..+. ..........+.+|.++|+.++|||||+++++.....
T Consensus 157 ~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~-- 234 (474)
T KOG0194|consen 157 SDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEE-- 234 (474)
T ss_pred cCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCC--
Confidence 344556899999999999998776533 3 89998874 2345566778999999999999999999999986553
Q ss_pred CCccEEEEEecCC-cCHHHHHHhCC-CCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCcccc
Q 007541 98 EFKDIYVVFELME-SDLHQVIKAND-DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARV 175 (599)
Q Consensus 98 ~~~~iylV~E~~~-g~L~~~i~~~~-~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~ 175 (599)
-+|||||+|. |+|.++++.++ .++..+...++++.++||+|||+++++||||-..|+|+..++.+||+|||+++.
T Consensus 235 ---Pl~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~~~~~~vKISDFGLs~~ 311 (474)
T KOG0194|consen 235 ---PLMLVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLYSKKGVVKISDFGLSRA 311 (474)
T ss_pred ---ccEEEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHheecCCCeEEeCccccccC
Confidence 5999999999 59999999987 499999999999999999999999999999999999999999999999999975
Q ss_pred ccCCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHh-CCCCCCCCChhhHHHHHHHhcCCCCHHH
Q 007541 176 AFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLLGTPSPEA 254 (599)
Q Consensus 176 ~~~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLlt-G~~pF~g~~~~~~l~~I~~~lG~p~~e~ 254 (599)
...-. .. ....-.+..|+|||.+.. ..|++++||||+||+++|+++ |..||+|....+....|....-
T Consensus 312 ~~~~~-~~--~~~~klPirWLAPEtl~~--~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~kI~~~~~------ 380 (474)
T KOG0194|consen 312 GSQYV-MK--KFLKKLPIRWLAPETLNT--GIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKAKIVKNGY------ 380 (474)
T ss_pred Cccee-ec--cccccCcceecChhhhcc--CccccccchhheeeeEEeeeccCCCCCCCCCHHHHHHHHHhcCc------
Confidence 42100 00 011235678999999987 589999999999999999998 8889999887766555522100
Q ss_pred HHHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHH
Q 007541 255 IARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRL 334 (599)
Q Consensus 255 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dL 334 (599)
+.++ ....+.....+
T Consensus 381 --------------------------------------------------------------r~~~---~~~~p~~~~~~ 395 (474)
T KOG0194|consen 381 --------------------------------------------------------------RMPI---PSKTPKELAKV 395 (474)
T ss_pred --------------------------------------------------------------cCCC---CCCCHHHHHHH
Confidence 0000 11355678889
Q ss_pred HHHhcccCCCCCCCHHHHhcCccccCc
Q 007541 335 LERMLAFEPKDRPTAEEALADPYFKGL 361 (599)
Q Consensus 335 L~~mL~~DP~~RpTa~e~L~HP~f~~~ 361 (599)
+.+|+..||++|+|+.++.+ ++..+
T Consensus 396 ~~~c~~~~p~~R~tm~~i~~--~l~~~ 420 (474)
T KOG0194|consen 396 MKQCWKKDPEDRPTMSTIKK--KLEAL 420 (474)
T ss_pred HHHhccCChhhccCHHHHHH--HHHHH
Confidence 99999999999999999975 45444
No 384
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-34 Score=312.64 Aligned_cols=209 Identities=32% Similarity=0.489 Sum_probs=176.9
Q ss_pred cCCCCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCC-cC
Q 007541 19 YGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPS-RR 97 (599)
Q Consensus 19 ~~~~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s-~~ 97 (599)
-+++.-+..-+.||+|+||.||+++++.||+.||||.++... .....++.-+|+.+|++|+|+|||++.++=.+.. .-
T Consensus 9 ~~~~y~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~-~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~ 87 (732)
T KOG4250|consen 9 SGENYLWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKES-SLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGL 87 (732)
T ss_pred cCCCcceeehhhhcCCccceeeeecccccccchhHHhhhhhc-ccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCc
Confidence 367778888999999999999999999999999999987643 3455677789999999999999999988753322 01
Q ss_pred CCccEEEEEecCC-cCHHHHHHh---CCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeC--CCCc--eeeec
Q 007541 98 EFKDIYVVFELME-SDLHQVIKA---NDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILAN--ADCK--LKICD 169 (599)
Q Consensus 98 ~~~~iylV~E~~~-g~L~~~i~~---~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~--~~~~--lKL~D 169 (599)
....-.+|||||. |+|..++.+ ..+|++.++..++..+..||.|||.+||+||||||.||++- .+|+ -||||
T Consensus 88 ~~~~~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKLtD 167 (732)
T KOG4250|consen 88 VTRLPVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQSIYKLTD 167 (732)
T ss_pred ccccceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCCCceEEeeec
Confidence 1245689999999 699999974 34899999999999999999999999999999999999864 3444 69999
Q ss_pred cCccccccCCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCC
Q 007541 170 FGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPG 233 (599)
Q Consensus 170 FGlA~~~~~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g 233 (599)
||.|+....+. .++..+||+.|.+||+... ...|+..+|.||+||++|++.||..||-.
T Consensus 168 fG~Arel~d~s----~~~S~vGT~~YLhPel~E~-q~~y~~tVDLWS~GvtlY~caTG~lPF~p 226 (732)
T KOG4250|consen 168 FGAARELDDNS----LFTSLVGTEEYLHPELYER-QKKYTATVDLWSFGVTLYECATGELPFIP 226 (732)
T ss_pred ccccccCCCCC----eeeeecCchhhcChHHHhh-ccCcCceeehhhhhhHHHHHhccCCCCCc
Confidence 99999765433 4678899999999999874 26789999999999999999999999853
No 385
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=100.00 E-value=9.9e-35 Score=318.72 Aligned_cols=247 Identities=32% Similarity=0.476 Sum_probs=191.3
Q ss_pred EEEEeecCce-EEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcC-CCCccccceeecCCCcCCCccEEEE
Q 007541 28 EEVIGKGSYG-VVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLR-HPDIVEIKHILLPPSRREFKDIYVV 105 (599)
Q Consensus 28 ~~~LG~G~~g-~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~-HpnIv~l~~v~~~~s~~~~~~iylV 105 (599)
.+++|.|+.| +||+|.- .|+.||||.+-. .....+.|||.+|+... |||||+.++.= .+.+.+||.
T Consensus 514 ~eilG~Gs~Gt~Vf~G~y--e~R~VAVKrll~-----e~~~~A~rEi~lL~eSD~H~NviRyyc~E-----~d~qF~YIa 581 (903)
T KOG1027|consen 514 KEILGYGSNGTVVFRGVY--EGREVAVKRLLE-----EFFDFAQREIQLLQESDEHPNVIRYYCSE-----QDRQFLYIA 581 (903)
T ss_pred HHHcccCCCCcEEEEEee--CCceehHHHHhh-----HhHHHHHHHHHHHHhccCCCceEEEEeec-----cCCceEEEE
Confidence 3678999887 5788854 588999998753 34557789999999985 99999987654 445689999
Q ss_pred EecCCcCHHHHHHhCC-C---CCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCC---C--CceeeeccCccccc
Q 007541 106 FELMESDLHQVIKAND-D---LTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANA---D--CKLKICDFGLARVA 176 (599)
Q Consensus 106 ~E~~~g~L~~~i~~~~-~---lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~---~--~~lKL~DFGlA~~~ 176 (599)
.|+|..+|.++++... . ......+.++.|++.||+|||+.+||||||||+||||.. + ..++|+|||+++..
T Consensus 582 lELC~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl 661 (903)
T KOG1027|consen 582 LELCACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKL 661 (903)
T ss_pred ehHhhhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcccccccCCCceEEEEccCCCcceeEEeccccccccc
Confidence 9999999999998741 1 112456788999999999999999999999999999986 3 45899999999988
Q ss_pred cCCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhC-CCCCCCCChhhHHHHHHHhcCCCCHHHH
Q 007541 177 FNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTG-KPLFPGKNVVHQLDIMTDLLGTPSPEAI 255 (599)
Q Consensus 177 ~~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG-~~pF~g~~~~~~l~~I~~~lG~p~~e~i 255 (599)
..+...-....+..||-.|+|||++.. ..-+.++||+|+|||+|..++| ..||...- ..+.+.+. |
T Consensus 662 ~~~~sS~~r~s~~sGt~GW~APE~L~~--~~~~~avDiFslGCvfyYvltgG~HpFGd~~-~R~~NIl~---~------- 728 (903)
T KOG1027|consen 662 AGGKSSFSRLSGGSGTSGWQAPEQLRE--DRKTQAVDIFSLGCVFYYVLTGGSHPFGDSL-ERQANILT---G------- 728 (903)
T ss_pred CCCcchhhcccCCCCcccccCHHHHhc--cccCcccchhhcCceEEEEecCCccCCCchH-Hhhhhhhc---C-------
Confidence 666555444567789999999999976 4556799999999999999986 78885432 11111110 0
Q ss_pred HHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHH
Q 007541 256 ARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLL 335 (599)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL 335 (599)
...+..+-+..+.+|.|||
T Consensus 729 -------------------------------------------------------------~~~L~~L~~~~d~eA~dLI 747 (903)
T KOG1027|consen 729 -------------------------------------------------------------NYTLVHLEPLPDCEAKDLI 747 (903)
T ss_pred -------------------------------------------------------------ccceeeeccCchHHHHHHH
Confidence 0111122223333899999
Q ss_pred HHhcccCCCCCCCHHHHhcCccccC
Q 007541 336 ERMLAFEPKDRPTAEEALADPYFKG 360 (599)
Q Consensus 336 ~~mL~~DP~~RpTa~e~L~HP~f~~ 360 (599)
.+||.+||..||||.++|.||+|=.
T Consensus 748 ~~ml~~dP~~RPsa~~VL~HPlFW~ 772 (903)
T KOG1027|consen 748 SRMLNPDPQLRPSATDVLNHPLFWD 772 (903)
T ss_pred HHhcCCCcccCCCHHHHhCCCccCC
Confidence 9999999999999999999999954
No 386
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-33 Score=320.09 Aligned_cols=252 Identities=22% Similarity=0.399 Sum_probs=204.9
Q ss_pred CCceEEEEEEeecCceEEEEEEECCCCc-----EEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCc
Q 007541 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGE-----KVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSR 96 (599)
Q Consensus 22 ~~rY~i~~~LG~G~~g~V~~a~d~~tg~-----~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~ 96 (599)
...-++.+.||+|.||.||.|.-..... .||||.+++. ........+++|..+|+.++|||||++++++.+.
T Consensus 691 ~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~-~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~-- 767 (1025)
T KOG1095|consen 691 RKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRL-SSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDS-- 767 (1025)
T ss_pred hhheEeeeeeccccccceEEEEEecCCCCccceEEEEEecccc-CCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCC--
Confidence 4566788999999999999998655433 4999998753 3445677899999999999999999999999764
Q ss_pred CCCccEEEEEecCC-cCHHHHHHhC-------CCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeee
Q 007541 97 REFKDIYVVFELME-SDLHQVIKAN-------DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKIC 168 (599)
Q Consensus 97 ~~~~~iylV~E~~~-g~L~~~i~~~-------~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~ 168 (599)
...+|++|||+ |||..+|++. ..++..+...|+.||++|++||+++++|||||-..|+|++....+||+
T Consensus 768 ---~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~~~r~VKIa 844 (1025)
T KOG1095|consen 768 ---GPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLLDERRVVKIA 844 (1025)
T ss_pred ---CCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheeecccCcEEEc
Confidence 36799999999 6999999875 268899999999999999999999999999999999999999999999
Q ss_pred ccCccccccCCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHh-CCCCCCCCChhhHHHHHHHhc
Q 007541 169 DFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLL 247 (599)
Q Consensus 169 DFGlA~~~~~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLlt-G~~pF~g~~~~~~l~~I~~~l 247 (599)
|||+|+-......-.. .....-...|||||.+.. ..++.++|||||||++||+++ |..||++.++.+.+....+--
T Consensus 845 DFGlArDiy~~~yyr~-~~~a~lPvkWm~PEsl~d--~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~~~~~gg 921 (1025)
T KOG1095|consen 845 DFGLARDIYDKDYYRK-HGEAMLPVKWMPPESLKD--GIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLLDVLEGG 921 (1025)
T ss_pred ccchhHhhhhchheec-cCccccceecCCHHHHhh--cccccccchhhhHHHHHHHHhCCCCCCCCcchHHHHHHHHhCC
Confidence 9999994322211110 011133457999999987 689999999999999999998 899999988776554332110
Q ss_pred CCCCHHHHHHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCC
Q 007541 248 GTPSPEAIARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNA 327 (599)
Q Consensus 248 G~p~~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (599)
. ....+.+
T Consensus 922 -R-----------------------------------------------------------------------L~~P~~C 929 (1025)
T KOG1095|consen 922 -R-----------------------------------------------------------------------LDPPSYC 929 (1025)
T ss_pred -c-----------------------------------------------------------------------cCCCCCC
Confidence 0 0112456
Q ss_pred CHHHHHHHHHhcccCCCCCCCHHHHhc
Q 007541 328 NPLALRLLERMLAFEPKDRPTAEEALA 354 (599)
Q Consensus 328 s~~a~dLL~~mL~~DP~~RpTa~e~L~ 354 (599)
+..+.+||..|++.||++||++..+++
T Consensus 930 P~~ly~lM~~CW~~~pe~RP~F~~i~~ 956 (1025)
T KOG1095|consen 930 PEKLYQLMLQCWKHDPEDRPSFRTIVE 956 (1025)
T ss_pred ChHHHHHHHHHccCChhhCccHHHHHh
Confidence 777899999999999999999999997
No 387
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.4e-32 Score=287.79 Aligned_cols=246 Identities=22% Similarity=0.430 Sum_probs=205.4
Q ss_pred ceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEE
Q 007541 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIY 103 (599)
Q Consensus 24 rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~iy 103 (599)
......+||-|-||.||.+++++..-.||||.++. .....+.|+.|..+|+.++|||+|+|+++|... .-+|
T Consensus 268 dItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKE---DtMeveEFLkEAAvMKeikHpNLVqLLGVCT~E-----pPFY 339 (1157)
T KOG4278|consen 268 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE---DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHE-----PPFY 339 (1157)
T ss_pred heeeeeccCCCcccceeeeeeeccceeeehhhhhh---cchhHHHHHHHHHHHHhhcCccHHHHhhhhccC-----CCeE
Confidence 34567899999999999999999999999999873 455678999999999999999999999999544 3589
Q ss_pred EEEecCC-cCHHHHHHhCC--CCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCCC
Q 007541 104 VVFELME-SDLHQVIKAND--DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT 180 (599)
Q Consensus 104 lV~E~~~-g~L~~~i~~~~--~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~ 180 (599)
||+|||. |+|.++++.-+ .++--...++.-||..|+.||..+++|||||-..|.||.++..+||+||||+|....++
T Consensus 340 IiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLVgEnhiVKvADFGLsRlMtgDT 419 (1157)
T KOG4278|consen 340 IITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHIVKVADFGLSRLMTGDT 419 (1157)
T ss_pred EEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhccccccceEEeeccchhhhhcCCc
Confidence 9999999 89999998643 46677788889999999999999999999999999999999999999999999876655
Q ss_pred CCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHh-CCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHh
Q 007541 181 PTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVC 259 (599)
Q Consensus 181 ~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLlt-G~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~ 259 (599)
.+. +-..--..-|.|||-+.- ..++.++|||+||++|||+.| |..||+|-+....+.++.+-...
T Consensus 420 YTA--HAGAKFPIKWTAPEsLAy--NtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSqVY~LLEkgyRM---------- 485 (1157)
T KOG4278|consen 420 YTA--HAGAKFPIKWTAPESLAY--NTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYGLLEKGYRM---------- 485 (1157)
T ss_pred eec--ccCccCcccccCcccccc--cccccchhhHHHHHHHHHHHhcCCCCCCCccHHHHHHHHhccccc----------
Confidence 432 233344567999998865 689999999999999999998 89999998765554444321100
Q ss_pred hhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHhc
Q 007541 260 LLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERML 339 (599)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL 339 (599)
+....+++.+.+|++.|+
T Consensus 486 --------------------------------------------------------------~~PeGCPpkVYeLMraCW 503 (1157)
T KOG4278|consen 486 --------------------------------------------------------------DGPEGCPPKVYELMRACW 503 (1157)
T ss_pred --------------------------------------------------------------cCCCCCCHHHHHHHHHHh
Confidence 111357788999999999
Q ss_pred ccCCCCCCCHHHHh
Q 007541 340 AFEPKDRPTAEEAL 353 (599)
Q Consensus 340 ~~DP~~RpTa~e~L 353 (599)
+|+|.+||+..|+-
T Consensus 504 ~WsPsDRPsFaeiH 517 (1157)
T KOG4278|consen 504 NWSPSDRPSFAEIH 517 (1157)
T ss_pred cCCcccCccHHHHH
Confidence 99999999999983
No 388
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=7.6e-33 Score=294.29 Aligned_cols=245 Identities=26% Similarity=0.460 Sum_probs=197.6
Q ss_pred EEEEEeecCceEEEEEEECCC--C--cEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccE
Q 007541 27 IEEVIGKGSYGVVCSAYDTRT--G--EKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDI 102 (599)
Q Consensus 27 i~~~LG~G~~g~V~~a~d~~t--g--~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~i 102 (599)
+.+.||.|-||.||+|.-..- | --||||..+.. ....+.+.|+.|..+|+.+.||||++|++++... -+
T Consensus 393 l~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d-~t~d~tekflqEa~iMrnfdHphIikLIGv~~e~------P~ 465 (974)
T KOG4257|consen 393 LKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTD-CTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVEQ------PM 465 (974)
T ss_pred HHHhhcCCcccceeeeEecccccCcceeeeeehhccC-CChhhHHHHHHHHHHHHhCCCcchhheeeeeecc------ce
Confidence 357899999999999985433 3 34899988753 3344578899999999999999999999999543 58
Q ss_pred EEEEecCC-cCHHHHHHhCC-CCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCCC
Q 007541 103 YVVFELME-SDLHQVIKAND-DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT 180 (599)
Q Consensus 103 ylV~E~~~-g~L~~~i~~~~-~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~ 180 (599)
+||||++. |.|..+++.+. .|+......|++||..||.|||+.+.|||||-..||||.+..-+||+||||+|....+.
T Consensus 466 WivmEL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed~~ 545 (974)
T KOG4257|consen 466 WIVMELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILVSSPQCVKLADFGLSRYLEDDA 545 (974)
T ss_pred eEEEecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheeecCcceeeecccchhhhccccc
Confidence 99999999 89999998764 78999999999999999999999999999999999999999999999999999875433
Q ss_pred CCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHh-CCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHh
Q 007541 181 PTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVC 259 (599)
Q Consensus 181 ~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLlt-G~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~ 259 (599)
.-. -+...-+.-|||||.+.- ..++.++|+|.||++++|+|. |..||.|-.+.+.+-.|.+
T Consensus 546 yYk--aS~~kLPIKWmaPESINf--RrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~~iEn-------------- 607 (974)
T KOG4257|consen 546 YYK--ASRGKLPIKWMAPESINF--RRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIGHIEN-------------- 607 (974)
T ss_pred hhh--ccccccceeecCccccch--hcccchhhHHHHHHHHHHHHHhcCCccccccccceEEEecC--------------
Confidence 210 111123456999999865 789999999999999999885 9999988655443322211
Q ss_pred hhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHhc
Q 007541 260 LLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERML 339 (599)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL 339 (599)
.... ...+++++.+..|+.+|+
T Consensus 608 -------------------------------------------------------GeRl---P~P~nCPp~LYslmskcW 629 (974)
T KOG4257|consen 608 -------------------------------------------------------GERL---PCPPNCPPALYSLMSKCW 629 (974)
T ss_pred -------------------------------------------------------CCCC---CCCCCCChHHHHHHHHHh
Confidence 1111 123678899999999999
Q ss_pred ccCCCCCCCHHHHhc
Q 007541 340 AFEPKDRPTAEEALA 354 (599)
Q Consensus 340 ~~DP~~RpTa~e~L~ 354 (599)
.+||.+||+..|+.+
T Consensus 630 ayeP~kRPrftei~~ 644 (974)
T KOG4257|consen 630 AYEPSKRPRFTEIKA 644 (974)
T ss_pred ccCcccCCcHHHHHH
Confidence 999999999888754
No 389
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.98 E-value=6.9e-33 Score=297.80 Aligned_cols=253 Identities=25% Similarity=0.379 Sum_probs=207.6
Q ss_pred CCceEEEEEEeecCceEEEEEEECCC-C--cEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCC
Q 007541 22 GSRYKIEEVIGKGSYGVVCSAYDTRT-G--EKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRRE 98 (599)
Q Consensus 22 ~~rY~i~~~LG~G~~g~V~~a~d~~t-g--~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~ 98 (599)
.++..+.++||+|+||+||.|.++.- | -.||||++....... ....|++|+.+|..|+|+|+++|++++.+.
T Consensus 109 ee~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~-~mddflrEas~M~~L~H~hliRLyGvVl~q---- 183 (1039)
T KOG0199|consen 109 EEQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNA-IMDDFLREASHMLKLQHPHLIRLYGVVLDQ---- 183 (1039)
T ss_pred HHHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccch-hHHHHHHHHHHHHhccCcceeEEeeeeccc----
Confidence 45667788999999999999987654 3 359999997654443 567899999999999999999999999753
Q ss_pred CccEEEEEecCC-cCHHHHHHh--CCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCcccc
Q 007541 99 FKDIYVVFELME-SDLHQVIKA--NDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARV 175 (599)
Q Consensus 99 ~~~iylV~E~~~-g~L~~~i~~--~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~ 175 (599)
-+.||||++. |+|++.+.+ ...|-......|+.||+.|+.||.++++|||||-..|||+-..-.||||||||.|.
T Consensus 184 --p~mMV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNlllasprtVKI~DFGLmRa 261 (1039)
T KOG0199|consen 184 --PAMMVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLLASPRTVKICDFGLMRA 261 (1039)
T ss_pred --hhhHHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhheecccceeeeecccceec
Confidence 4789999999 799999986 24677888999999999999999999999999999999999999999999999998
Q ss_pred ccCCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHh-CCCCCCCCChhhHHHHHHHhcCCCCHHH
Q 007541 176 AFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLLGTPSPEA 254 (599)
Q Consensus 176 ~~~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLlt-G~~pF~g~~~~~~l~~I~~~lG~p~~e~ 254 (599)
......-..+-...-....|+|||.|.. .+++-++|+|++||++|||++ |..||.|.+....|++|-+---
T Consensus 262 Lg~ned~Yvm~p~rkvPfAWCaPEsLrh--~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~qIL~~iD~~er------ 333 (1039)
T KOG0199|consen 262 LGENEDMYVMAPQRKVPFAWCAPESLRH--RKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQILKNIDAGER------ 333 (1039)
T ss_pred cCCCCcceEecCCCcCcccccCHhHhcc--ccccccchhhhhhhhHHhhhccCCCCCCCCCHHHHHHhcccccc------
Confidence 7654433322223345567999999976 789999999999999999998 7899999988777666531000
Q ss_pred HHHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHH
Q 007541 255 IARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRL 334 (599)
Q Consensus 255 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dL 334 (599)
...-+.+++...++
T Consensus 334 ------------------------------------------------------------------LpRPk~csedIY~i 347 (1039)
T KOG0199|consen 334 ------------------------------------------------------------------LPRPKYCSEDIYQI 347 (1039)
T ss_pred ------------------------------------------------------------------CCCCCCChHHHHHH
Confidence 01113567889999
Q ss_pred HHHhcccCCCCCCCHHHHhcC
Q 007541 335 LERMLAFEPKDRPTAEEALAD 355 (599)
Q Consensus 335 L~~mL~~DP~~RpTa~e~L~H 355 (599)
+.+|+..+|.+|||+..+.+.
T Consensus 348 mk~cWah~paDRptFsair~~ 368 (1039)
T KOG0199|consen 348 MKNCWAHNPADRPTFSAIRED 368 (1039)
T ss_pred HHHhccCCccccccHHHHHHh
Confidence 999999999999999888644
No 390
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.97 E-value=1.8e-32 Score=258.69 Aligned_cols=211 Identities=26% Similarity=0.461 Sum_probs=173.6
Q ss_pred ceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHH-HhcCCCCccccceeecCCCcCCCccE
Q 007541 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLL-RLLRHPDIVEIKHILLPPSRREFKDI 102 (599)
Q Consensus 24 rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL-~~l~HpnIv~l~~v~~~~s~~~~~~i 102 (599)
....+..||+|+||+|-+.++..+|...|+|.|..... ....++.++|+.+. +....|.+|.+++.+.. ..++
T Consensus 47 ~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn-~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~r-----egdv 120 (282)
T KOG0984|consen 47 DLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVN-SQEQKRLLMDLDIIMRTVDCPFTVHFYGALFR-----EGDV 120 (282)
T ss_pred hhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcC-hHHHHHHHHhhhhhccCCCCCeEEEeehhhhc-----cccE
Confidence 33446789999999999999999999999999975444 34556788999984 55569999999998844 3589
Q ss_pred EEEEecCCcCHHHH----HHhCCCCCHHHHHHHHHHHHhhhhhcccC-ceEeecCCCCcEEeCCCCceeeeccCcccccc
Q 007541 103 YVVFELMESDLHQV----IKANDDLTPEHYQFFLYQLLRGLKYIHTA-NVFHRDLKPKNILANADCKLKICDFGLARVAF 177 (599)
Q Consensus 103 ylV~E~~~g~L~~~----i~~~~~lse~~i~~i~~QLl~aL~yLHs~-gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~ 177 (599)
++.||.|..+|..+ ++.++.++|..+-.|+..++.||.|||++ .|+|||+||.|||+|.+|++|+||||.+....
T Consensus 121 wIcME~M~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~ 200 (282)
T KOG0984|consen 121 WICMELMDTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINYDGQVKICDFGISGYLV 200 (282)
T ss_pred EEeHHHhhhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEccCCcEEEcccccceeeh
Confidence 99999999887654 45677899999999999999999999987 89999999999999999999999999998764
Q ss_pred CCCCCcccccccccCccccCcccccc--ccCCCCcchhhHhHHHHHHHHHhCCCCCCCC-ChhhHHHHHH
Q 007541 178 NDTPTAIFWTDYVATRWYRAPELCGS--FFSKYTPAIDIWSIGCIFAELLTGKPLFPGK-NVVHQLDIMT 244 (599)
Q Consensus 178 ~~~~~~~~~t~~~gt~~Y~APE~l~~--~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~-~~~~~l~~I~ 244 (599)
+.... +-..|-..|+|||.+.. ....|+.++||||||+.++||.+++.||+.. +...|+..+.
T Consensus 201 dSiAk----t~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~tpF~qLkqvV 266 (282)
T KOG0984|consen 201 DSIAK----TMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGTPFQQLKQVV 266 (282)
T ss_pred hhhHH----HHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCCHHHHHHHHh
Confidence 43322 22356677999998743 2247999999999999999999999999754 4566666554
No 391
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=99.97 E-value=1.3e-32 Score=299.34 Aligned_cols=261 Identities=26% Similarity=0.416 Sum_probs=218.9
Q ss_pred cccccCCCCceEEEEEEeecCceEEEEEEECCCCc---EEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceee
Q 007541 15 FFTEYGEGSRYKIEEVIGKGSYGVVCSAYDTRTGE---KVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHIL 91 (599)
Q Consensus 15 ~~~~~~~~~rY~i~~~LG~G~~g~V~~a~d~~tg~---~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~ 91 (599)
.|+.--..+.-.|.++||.|.||.||+++.+..|+ .||||.++..+. ......|+.|..||=++.||||++|.++.
T Consensus 621 eFakEId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~Gyt-ekqrrdFL~EAsIMGQFdHPNIIrLEGVV 699 (996)
T KOG0196|consen 621 EFAKEIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYT-EKQRRDFLSEASIMGQFDHPNIIRLEGVV 699 (996)
T ss_pred HhhhhcChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCcc-HHHHhhhhhhhhhcccCCCCcEEEEEEEE
Confidence 34444556778899999999999999999887764 599999986433 34566799999999999999999999998
Q ss_pred cCCCcCCCccEEEEEecCC-cCHHHHHHhC-CCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeec
Q 007541 92 LPPSRREFKDIYVVFELME-SDLHQVIKAN-DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICD 169 (599)
Q Consensus 92 ~~~s~~~~~~iylV~E~~~-g~L~~~i~~~-~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~D 169 (599)
.. .+-+.||+|||+ |.|..+++.+ +.++.-++--+++.|+.|++||-..|.|||||-..|||||.|-..|++|
T Consensus 700 Tk-----s~PvMIiTEyMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILVNsnLvCKVsD 774 (996)
T KOG0196|consen 700 TK-----SKPVMIITEYMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILVNSNLVCKVSD 774 (996)
T ss_pred ec-----CceeEEEhhhhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheeeccceEEEecc
Confidence 43 346899999999 8999999876 4788889999999999999999999999999999999999999999999
Q ss_pred cCccccccCCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHh-CCCCCCCCChhhHHHHHHHhcC
Q 007541 170 FGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLLG 248 (599)
Q Consensus 170 FGlA~~~~~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLlt-G~~pF~g~~~~~~l~~I~~~lG 248 (599)
|||+|...++.+....-..--.+..|.|||.|.- .+++.++|+||+|++|+|.+. |.-||=..++.+.+..|.+-..
T Consensus 775 FGLSRvledd~~~~ytt~GGKIPiRWTAPEAIa~--RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQdVIkaIe~gyR 852 (996)
T KOG0196|consen 775 FGLSRVLEDDPEAAYTTLGGKIPIRWTAPEAIAY--RKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEQGYR 852 (996)
T ss_pred ccceeecccCCCccccccCCccceeecChhHhhh--cccCchhhccccceEEEEecccCCCcccccchHHHHHHHHhccC
Confidence 9999988665533211112223567999999976 799999999999999999875 8888888888888887776665
Q ss_pred CCCHHHHHHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCC
Q 007541 249 TPSPEAIARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNAN 328 (599)
Q Consensus 249 ~p~~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 328 (599)
-|++ .+.+
T Consensus 853 LPpP------------------------------------------------------------------------mDCP 860 (996)
T KOG0196|consen 853 LPPP------------------------------------------------------------------------MDCP 860 (996)
T ss_pred CCCC------------------------------------------------------------------------CCCc
Confidence 5554 3567
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHhcC
Q 007541 329 PLALRLLERMLAFEPKDRPTAEEALAD 355 (599)
Q Consensus 329 ~~a~dLL~~mL~~DP~~RpTa~e~L~H 355 (599)
..+..|+..|++.|-..||+..|++.+
T Consensus 861 ~aL~qLMldCWqkdR~~RP~F~qiV~~ 887 (996)
T KOG0196|consen 861 AALYQLMLDCWQKDRNRRPKFAQIVST 887 (996)
T ss_pred HHHHHHHHHHHHHHhhcCCCHHHHHHH
Confidence 788999999999999999999999884
No 392
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=99.97 E-value=3.6e-32 Score=287.85 Aligned_cols=262 Identities=24% Similarity=0.357 Sum_probs=203.4
Q ss_pred CCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCcc
Q 007541 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKD 101 (599)
Q Consensus 22 ~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~ 101 (599)
.++..++++||+|-||.|.+|.- ..+.+||+|+++..... .....+.+||++|.+|+||||++|++++..+. -
T Consensus 537 Rs~L~~~ekiGeGqFGEVhLCev-eg~lkVAVK~Lr~~a~~-~~r~~F~kEIkiLsqLkhPNIveLvGVC~~De-----P 609 (807)
T KOG1094|consen 537 RSRLRFKEKIGEGQFGEVHLCEV-EGPLKVAVKILRPDATK-NARNDFLKEIKILSRLKHPNIVELLGVCVQDD-----P 609 (807)
T ss_pred hhheehhhhhcCcccceeEEEEe-cCceEEEEeecCcccch-hHHHHHHHHHHHHhccCCCCeeEEEeeeecCC-----c
Confidence 36678899999999999999974 34799999999754332 23467899999999999999999999997553 5
Q ss_pred EEEEEecCC-cCHHHHHHhCC--CCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccC
Q 007541 102 IYVVFELME-SDLHQVIKAND--DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFN 178 (599)
Q Consensus 102 iylV~E~~~-g~L~~~i~~~~--~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~ 178 (599)
+|||+|||+ |+|.+++.++. .+.-.....|+.||..|++||.+.++|||||.+.|+|++.++++||+|||.+|-.-.
T Consensus 610 icmI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lys 689 (807)
T KOG1094|consen 610 LCMITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLVDGEFTIKIADFGMSRNLYS 689 (807)
T ss_pred hHHHHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhchhhccccccceeecCcccEEecCccccccccc
Confidence 899999999 89999999873 334455666999999999999999999999999999999999999999999986543
Q ss_pred CCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHH--hCCCCCCCCChhhHHHHHHHhcCCCCHHHHH
Q 007541 179 DTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELL--TGKPLFPGKNVVHQLDIMTDLLGTPSPEAIA 256 (599)
Q Consensus 179 ~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLl--tG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~ 256 (599)
+..- ......+-+..|||+|.|.. .+++.++|+|++|+++||++ |...||....+....+....++..+...
T Consensus 690 g~yy-~vqgr~vlpiRwmawEsill--gkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~~~~~~~~~~~--- 763 (807)
T KOG1094|consen 690 GDYY-RVQGRAVLPIRWMAWESILL--GKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENAGEFFRDQGRQ--- 763 (807)
T ss_pred CCce-eeecceeeeeeehhHHHHHh--ccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhhhhhcCCCCcc---
Confidence 3221 11234466788999998765 68999999999999999976 4678887665554444333333222111
Q ss_pred HHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHH
Q 007541 257 RVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLE 336 (599)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~ 336 (599)
......+-++..+.+||.
T Consensus 764 --------------------------------------------------------------~~l~~P~~cp~~lyelml 781 (807)
T KOG1094|consen 764 --------------------------------------------------------------VVLSRPPACPQGLYELML 781 (807)
T ss_pred --------------------------------------------------------------eeccCCCcCcHHHHHHHH
Confidence 111112345677889999
Q ss_pred HhcccCCCCCCCHHHHhcCccccC
Q 007541 337 RMLAFEPKDRPTAEEALADPYFKG 360 (599)
Q Consensus 337 ~mL~~DP~~RpTa~e~L~HP~f~~ 360 (599)
+|+..|-++|||.+++- -+|++
T Consensus 782 ~Cw~~es~~RPsFe~lh--~~lq~ 803 (807)
T KOG1094|consen 782 RCWRRESEQRPSFEQLH--LFLQE 803 (807)
T ss_pred HHhchhhhcCCCHHHHH--HHHHH
Confidence 99999999999999984 34543
No 393
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.97 E-value=3.8e-33 Score=299.37 Aligned_cols=269 Identities=27% Similarity=0.420 Sum_probs=219.0
Q ss_pred cccccccCCCCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeec
Q 007541 13 VDFFTEYGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILL 92 (599)
Q Consensus 13 ~~~~~~~~~~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~ 92 (599)
-|.+-+ .-.++|+++.++|+|+||.||+|+|+.+++..|+|+++.. ...+..-+..||.+++.++||||+.+++-|.
T Consensus 6 ~disrr-nP~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLe--p~dd~~~iqqei~~~~dc~h~nivay~gsyl 82 (829)
T KOG0576|consen 6 SDISRR-NPQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLE--PGDDFSGIQQEIGMLRDCRHPNIVAYFGSYL 82 (829)
T ss_pred chhhhc-CCccchhheeeecCCcccchhhhcccccCchhhheeeecc--CCccccccccceeeeecCCCcChHHHHhhhh
Confidence 344444 6678999999999999999999999999999999999853 3345566779999999999999999999986
Q ss_pred CCCcCCCccEEEEEecCC-cCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccC
Q 007541 93 PPSRREFKDIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFG 171 (599)
Q Consensus 93 ~~s~~~~~~iylV~E~~~-g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFG 171 (599)
.. ..++++||||+ |+|.++-.-.+.+++.++.++++..++||+|||+.|=+|||||-.|||+++.|.+|++|||
T Consensus 83 r~-----dklwicMEycgggslQdiy~~TgplselqiayvcRetl~gl~ylhs~gk~hRdiKGanilltd~gDvklaDfg 157 (829)
T KOG0576|consen 83 RR-----DKLWICMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLTDEGDVKLADFG 157 (829)
T ss_pred hh-----cCcEEEEEecCCCcccceeeecccchhHHHHHHHhhhhccchhhhcCCcccccccccceeecccCceeecccC
Confidence 43 36899999999 5888887778899999999999999999999999999999999999999999999999999
Q ss_pred ccccccCCCCCcccccccccCccccCcccc-ccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCC
Q 007541 172 LARVAFNDTPTAIFWTDYVATRWYRAPELC-GSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTP 250 (599)
Q Consensus 172 lA~~~~~~~~~~~~~t~~~gt~~Y~APE~l-~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p 250 (599)
.+..+..... ...+.+||++|||||+- ......|...+|||++|+...||---++|.-.......+..|.+..-.|
T Consensus 158 vsaqitati~---KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~LmTkS~~qp 234 (829)
T KOG0576|consen 158 VSAQITATIA---KRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFLMTKSGFQP 234 (829)
T ss_pred chhhhhhhhh---hhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHHHhhccCCCC
Confidence 9876533222 23567999999999974 2222579999999999999999987776655554444444444433322
Q ss_pred CHHHHHHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHH
Q 007541 251 SPEAIARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPL 330 (599)
Q Consensus 251 ~~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 330 (599)
+. + +--...++.
T Consensus 235 p~-------------------------------------------------------------------l-kDk~kws~~ 246 (829)
T KOG0576|consen 235 PT-------------------------------------------------------------------L-KDKTKWSEF 246 (829)
T ss_pred Cc-------------------------------------------------------------------c-cCCccchHH
Confidence 21 0 001235677
Q ss_pred HHHHHHHhcccCCCCCCCHHHHhcCccccC
Q 007541 331 ALRLLERMLAFEPKDRPTAEEALADPYFKG 360 (599)
Q Consensus 331 a~dLL~~mL~~DP~~RpTa~e~L~HP~f~~ 360 (599)
+-+|++.+|..+|++|||++-+|.|||...
T Consensus 247 fh~fvK~altknpKkRptaeklL~h~fvs~ 276 (829)
T KOG0576|consen 247 FHNFVKGALTKNPKKRPTAEKLLQHPFVSQ 276 (829)
T ss_pred HHHHHHHHhcCCCccCCChhhheeceeecc
Confidence 899999999999999999999999999974
No 394
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.97 E-value=4.6e-32 Score=286.91 Aligned_cols=200 Identities=25% Similarity=0.396 Sum_probs=173.0
Q ss_pred CCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhh------HHHHHHHHHHHHhcC---CCCccccceeec
Q 007541 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSD------ATRILREIKLLRLLR---HPDIVEIKHILL 92 (599)
Q Consensus 22 ~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~------~~~i~rEi~iL~~l~---HpnIv~l~~v~~ 92 (599)
-..|..++.+|.|+||.|++|+++.....|+||.|.+..--... .-.+--||.||..|+ |+||++++++|
T Consensus 560 ~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfF- 638 (772)
T KOG1152|consen 560 FSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFF- 638 (772)
T ss_pred cccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhhee-
Confidence 45699999999999999999999999999999999753221111 223556999999997 99999999999
Q ss_pred CCCcCCCccEEEEEecCC-c-CHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeecc
Q 007541 93 PPSRREFKDIYVVFELME-S-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDF 170 (599)
Q Consensus 93 ~~s~~~~~~iylV~E~~~-g-~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DF 170 (599)
++...+||+||.-+ | ||+++|.-...++|.+++.|++||..|+++||+.||||||||-+|+.++.+|-+||+||
T Consensus 639 ----Eddd~yyl~te~hg~gIDLFd~IE~kp~m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenvivd~~g~~klidf 714 (772)
T KOG1152|consen 639 ----EDDDYYYLETEVHGEGIDLFDFIEFKPRMDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIVDSNGFVKLIDF 714 (772)
T ss_pred ----ecCCeeEEEecCCCCCcchhhhhhccCccchHHHHHHHHHHHhccccccccCceecccccccEEEecCCeEEEeec
Confidence 45568999999887 4 99999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccccCCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCC
Q 007541 171 GLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFP 232 (599)
Q Consensus 171 GlA~~~~~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~ 232 (599)
|.|....++. +...+||..|.|||++++. ...+..-|||+||++||.++....||.
T Consensus 715 gsaa~~ksgp-----fd~f~gtv~~aapevl~g~-~y~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 715 GSAAYTKSGP-----FDVFVGTVDYAAPEVLGGE-KYLGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred cchhhhcCCC-----cceeeeeccccchhhhCCC-ccCCCcchhhhhhheeeEEEeccCCCc
Confidence 9998765443 3456899999999999983 344677899999999999998887774
No 395
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.97 E-value=4.2e-31 Score=315.60 Aligned_cols=187 Identities=27% Similarity=0.432 Sum_probs=157.4
Q ss_pred CceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccE
Q 007541 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDI 102 (599)
Q Consensus 23 ~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~i 102 (599)
..|...++||+|+||.||+|.++.+|..||||++..... ....|+.+|+.++|||||++++++... ...
T Consensus 690 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~------~~~~~~~~l~~l~HpnIv~~~~~~~~~-----~~~ 758 (968)
T PLN00113 690 SSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNS------IPSSEIADMGKLQHPNIVKLIGLCRSE-----KGA 758 (968)
T ss_pred hhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCcc------ccHHHHHHHhhCCCCCcceEEEEEEcC-----CCC
Confidence 346667899999999999999999999999999864221 112568899999999999999999543 468
Q ss_pred EEEEecCC-cCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcc---cCceEeecCCCCcEEeCCCCceeeeccCccccccC
Q 007541 103 YVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIH---TANVFHRDLKPKNILANADCKLKICDFGLARVAFN 178 (599)
Q Consensus 103 ylV~E~~~-g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLH---s~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~ 178 (599)
|+|||||+ ++|.++++ .+++..+..++.||++||+||| +.+|+||||||+|||++.++..+++ ||.+.....
T Consensus 759 ~lv~Ey~~~g~L~~~l~---~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~ 834 (968)
T PLN00113 759 YLIHEYIEGKNLSEVLR---NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCT 834 (968)
T ss_pred EEEEeCCCCCcHHHHHh---cCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-ecccccccc
Confidence 99999998 69999996 3889999999999999999999 6799999999999999998888776 666543321
Q ss_pred CCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCC
Q 007541 179 DTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPG 233 (599)
Q Consensus 179 ~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g 233 (599)
. +...+|..|+|||++.+ ..|+.++||||+||++|||++|+.||..
T Consensus 835 ~-------~~~~~t~~y~aPE~~~~--~~~~~~sDv~S~Gvvl~el~tg~~p~~~ 880 (968)
T PLN00113 835 D-------TKCFISSAYVAPETRET--KDITEKSDIYGFGLILIELLTGKSPADA 880 (968)
T ss_pred C-------CCccccccccCcccccC--CCCCcccchhhHHHHHHHHHhCCCCCCc
Confidence 1 23367899999999876 6799999999999999999999999853
No 396
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=99.97 E-value=1.7e-30 Score=270.59 Aligned_cols=200 Identities=26% Similarity=0.354 Sum_probs=164.0
Q ss_pred CCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHh--cCCCCccccceeecCCCcCCC
Q 007541 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRL--LRHPDIVEIKHILLPPSRREF 99 (599)
Q Consensus 22 ~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~--l~HpnIv~l~~v~~~~s~~~~ 99 (599)
..-.+++++||+|.||.||+|. -+++.||||++.. .+.+.+..|-+|.+. ++|+||++++..=...+. ..
T Consensus 209 l~pl~l~eli~~Grfg~V~Kaq--L~~~~VAVKifp~-----~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~-~~ 280 (534)
T KOG3653|consen 209 LDPLQLLELIGRGRFGCVWKAQ--LDNRLVAVKIFPE-----QEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTA-DR 280 (534)
T ss_pred CCchhhHHHhhcCccceeehhh--ccCceeEEEecCH-----HHHHHHHhHHHHHhccCccchhHHHhhchhccCCc-cc
Confidence 4567788999999999999995 4679999999863 344556667666554 479999999887544332 24
Q ss_pred ccEEEEEecCC-cCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccC---------ceEeecCCCCcEEeCCCCceeeec
Q 007541 100 KDIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTA---------NVFHRDLKPKNILANADCKLKICD 169 (599)
Q Consensus 100 ~~iylV~E~~~-g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~---------gIvHrDLKP~NILv~~~~~lKL~D 169 (599)
..++||++|-+ |+|.++++.+ .+++....+++..|.+||+|||+- .|+|||||.+||||..|+..-|+|
T Consensus 281 ~eywLVt~fh~kGsL~dyL~~n-tisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaD 359 (534)
T KOG3653|consen 281 MEYWLVTEFHPKGSLCDYLKAN-TISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIAD 359 (534)
T ss_pred cceeEEeeeccCCcHHHHHHhc-cccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeec
Confidence 57999999998 8999999987 699999999999999999999964 499999999999999999999999
Q ss_pred cCccccccCCCCCcccccccccCccccCccccccccCCCC-----cchhhHhHHHHHHHHHhCCCCCC
Q 007541 170 FGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYT-----PAIDIWSIGCIFAELLTGKPLFP 232 (599)
Q Consensus 170 FGlA~~~~~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys-----~~~DIWSlG~Il~eLltG~~pF~ 232 (599)
||||.....+.+.... ...+||+.|||||++.+- .++. .++||||+|.||+||++....+.
T Consensus 360 FGLAl~~~p~~~~~d~-~~qVGT~RYMAPEvLEga-inl~d~~Afkr~DvYamgLVLWEi~SRC~~~~ 425 (534)
T KOG3653|consen 360 FGLALRLEPGKPQGDT-HGQVGTRRYMAPEVLEGA-INLQDRDAFKRIDVYAMGLVLWEIASRCTDAD 425 (534)
T ss_pred cceeEEecCCCCCcch-hhhhhhhhhcCHHHHhhh-cccccHHHHHHHHHHHHHHHHHHHHhhccccc
Confidence 9999988755544332 347999999999999662 3333 36899999999999999876654
No 397
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.96 E-value=1.3e-30 Score=254.84 Aligned_cols=262 Identities=26% Similarity=0.405 Sum_probs=200.6
Q ss_pred cCCCCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcC-CCCccccceeecCCCcC
Q 007541 19 YGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLR-HPDIVEIKHILLPPSRR 97 (599)
Q Consensus 19 ~~~~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~-HpnIv~l~~v~~~~s~~ 97 (599)
....+.|.|.+.||+|.||.+-+|+|+.+...+|+|.+.+.. .....+.||...--.|. |.||+.-+++....+
T Consensus 20 v~l~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~---tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~-- 94 (378)
T KOG1345|consen 20 VDLEDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQ---TTQADFVREFHYSFFLSPHQHIIDTYEVAFQTS-- 94 (378)
T ss_pred cchhhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcch---hhHHHHHHHhccceeeccchhhhHHHHHHhhcC--
Confidence 455688999999999999999999999999999999987643 45667889999866675 999999998875433
Q ss_pred CCccEEEEEecCC-cCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCC--CCceeeeccCccc
Q 007541 98 EFKDIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANA--DCKLKICDFGLAR 174 (599)
Q Consensus 98 ~~~~iylV~E~~~-g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~--~~~lKL~DFGlA~ 174 (599)
+.+.+++||++ |+|..-+..+ ++.|...+.++.||+.||.|+|++++||||||.+||||-. ..++||||||+++
T Consensus 95 --d~YvF~qE~aP~gdL~snv~~~-GigE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~~df~rvKlcDFG~t~ 171 (378)
T KOG1345|consen 95 --DAYVFVQEFAPRGDLRSNVEAA-GIGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFDADFYRVKLCDFGLTR 171 (378)
T ss_pred --ceEEEeeccCccchhhhhcCcc-cccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEecCCccEEEeeeccccc
Confidence 46789999999 8999988775 5999999999999999999999999999999999999753 3579999999997
Q ss_pred cccCCCCCcccccccccCccccCccccccc---cCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCC
Q 007541 175 VAFNDTPTAIFWTDYVATRWYRAPELCGSF---FSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPS 251 (599)
Q Consensus 175 ~~~~~~~~~~~~t~~~gt~~Y~APE~l~~~---~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~ 251 (599)
..+.... ..--+..|.+||++... .-...+..|||.+|+|+|.+|||++||......+
T Consensus 172 k~g~tV~------~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d------------- 232 (378)
T KOG1345|consen 172 KVGTTVK------YLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMD------------- 232 (378)
T ss_pred ccCceeh------hhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccC-------------
Confidence 6532211 11224458999986432 1235678999999999999999999997433221
Q ss_pred HHHHHHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHH
Q 007541 252 PEAIARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLA 331 (599)
Q Consensus 252 ~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a 331 (599)
....+++.-... +.......|..+++.+
T Consensus 233 ---------------------------------------------------~~Y~~~~~w~~r-k~~~~P~~F~~fs~~a 260 (378)
T KOG1345|consen 233 ---------------------------------------------------KPYWEWEQWLKR-KNPALPKKFNPFSEKA 260 (378)
T ss_pred ---------------------------------------------------chHHHHHHHhcc-cCccCchhhcccCHHH
Confidence 111222221111 1224455677889999
Q ss_pred HHHHHHhcccCCCCC---CCHHHHhcCcccc
Q 007541 332 LRLLERMLAFEPKDR---PTAEEALADPYFK 359 (599)
Q Consensus 332 ~dLL~~mL~~DP~~R---pTa~e~L~HP~f~ 359 (599)
..+.++-|..+|++| .++......-|..
T Consensus 261 ~r~Fkk~lt~~~~drcki~~~kk~rk~~w~E 291 (378)
T KOG1345|consen 261 LRLFKKSLTPRFKDRCKIWTAKKMRKCLWKE 291 (378)
T ss_pred HHHHHHhcCCcccccchhHHHHHHHHHHHHH
Confidence 999999999999999 5555555555544
No 398
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.96 E-value=1.7e-28 Score=235.57 Aligned_cols=184 Identities=38% Similarity=0.653 Sum_probs=157.1
Q ss_pred EeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEEEEEecCC
Q 007541 31 IGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVVFELME 110 (599)
Q Consensus 31 LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~iylV~E~~~ 110 (599)
||+|++|.||++.+..+++.+++|++....... ....+.+|+.+++.++|++|+++++++... ...++|+|++.
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~-~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~-----~~~~~~~e~~~ 74 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSS-LLEELLREIEILKKLNHPNIVKLYGVFEDE-----NHLYLVMEYCE 74 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchh-HHHHHHHHHHHHHhcCCCCeeeEeeeeecC-----CeEEEEEecCC
Confidence 689999999999998889999999987532221 356788999999999999999999998543 47899999999
Q ss_pred -cCHHHHHHhC-CCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCC-CCceeeeccCccccccCCCCCccccc
Q 007541 111 -SDLHQVIKAN-DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANA-DCKLKICDFGLARVAFNDTPTAIFWT 187 (599)
Q Consensus 111 -g~L~~~i~~~-~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~-~~~lKL~DFGlA~~~~~~~~~~~~~t 187 (599)
++|.+++... ..++...+..++.+++++|++||+.|++|+||+|.||+++. ++.++|+|||.+........ ...
T Consensus 75 ~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~---~~~ 151 (215)
T cd00180 75 GGSLKDLLKENEGKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS---LLK 151 (215)
T ss_pred CCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc---hhh
Confidence 6999999876 47899999999999999999999999999999999999999 89999999999986543221 123
Q ss_pred ccccCccccCccccccccCCCCcchhhHhHHHHHHHH
Q 007541 188 DYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEL 224 (599)
Q Consensus 188 ~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eL 224 (599)
...+...|.+||.+... ..++.+.|+|++|+++++|
T Consensus 152 ~~~~~~~~~~pe~~~~~-~~~~~~~D~~~lg~~~~~l 187 (215)
T cd00180 152 TIVGTPAYMAPEVLLGK-GYYSEKSDIWSLGVILYEL 187 (215)
T ss_pred cccCCCCccChhHhccc-CCCCchhhhHHHHHHHHHH
Confidence 34677889999998662 3788899999999999999
No 399
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.96 E-value=2.6e-30 Score=302.32 Aligned_cols=210 Identities=16% Similarity=0.205 Sum_probs=151.3
Q ss_pred HhcCC-CCccccceeecCCCc--CCCccEEEEEecCCcCHHHHHHhC-CCCCHHHHHHHHHHHHhhhhhcccCceEeecC
Q 007541 77 RLLRH-PDIVEIKHILLPPSR--REFKDIYVVFELMESDLHQVIKAN-DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDL 152 (599)
Q Consensus 77 ~~l~H-pnIv~l~~v~~~~s~--~~~~~iylV~E~~~g~L~~~i~~~-~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDL 152 (599)
+.++| .||+++++.|..... .....++++||+++++|+++|... ..+++.+++.|++||++||.|||++||+||||
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~gIvHrDl 106 (793)
T PLN00181 27 KSLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECEDVSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQGIVVHNV 106 (793)
T ss_pred chhhHHHHHHHhhcccCCccccccccchhhhhhccCCccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhCCeeeccC
Confidence 34455 588888888733221 122468889999999999999753 46999999999999999999999999999999
Q ss_pred CCCcEEeCC-------------------CCceeeeccCccccccCCC-------------CCcccccccccCccccCccc
Q 007541 153 KPKNILANA-------------------DCKLKICDFGLARVAFNDT-------------PTAIFWTDYVATRWYRAPEL 200 (599)
Q Consensus 153 KP~NILv~~-------------------~~~lKL~DFGlA~~~~~~~-------------~~~~~~t~~~gt~~Y~APE~ 200 (599)
||+||||+. ++.+||+|||+++...... +........++|++|+|||+
T Consensus 107 KP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~ 186 (793)
T PLN00181 107 RPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSPEE 186 (793)
T ss_pred CchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceEChhh
Confidence 999999954 4556777777776421100 00001123578999999999
Q ss_pred cccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHhhhhhhhhcCCCCCcccCCCcc
Q 007541 201 CGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVCLLLNIIWCGYDGFMCSVAPSC 280 (599)
Q Consensus 201 l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (599)
+.+ ..|+.++||||||||||||++|.++|..... .+..+....
T Consensus 187 ~~~--~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~--~~~~~~~~~--------------------------------- 229 (793)
T PLN00181 187 DNG--SSSNCASDVYRLGVLLFELFCPVSSREEKSR--TMSSLRHRV--------------------------------- 229 (793)
T ss_pred hcc--CCCCchhhhhhHHHHHHHHhhCCCchhhHHH--HHHHHHHhh---------------------------------
Confidence 877 6799999999999999999999887653211 111000000
Q ss_pred chhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccccC
Q 007541 281 FLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKG 360 (599)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL~~DP~~RpTa~e~L~HP~f~~ 360 (599)
+ + .......+.+.+++.+||..||.+|||+.|+|+||||..
T Consensus 230 -------------------------------~----~----~~~~~~~~~~~~~~~~~L~~~P~~Rps~~eil~h~~~~~ 270 (793)
T PLN00181 230 -------------------------------L----P----PQILLNWPKEASFCLWLLHPEPSCRPSMSELLQSEFINE 270 (793)
T ss_pred -------------------------------c----C----hhhhhcCHHHHHHHHHhCCCChhhCcChHHHhhchhhhh
Confidence 0 0 000112345678999999999999999999999999987
Q ss_pred cc
Q 007541 361 LA 362 (599)
Q Consensus 361 ~~ 362 (599)
..
T Consensus 271 ~~ 272 (793)
T PLN00181 271 PR 272 (793)
T ss_pred hh
Confidence 53
No 400
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.96 E-value=1.9e-28 Score=240.08 Aligned_cols=212 Identities=36% Similarity=0.627 Sum_probs=177.8
Q ss_pred eEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEEE
Q 007541 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYV 104 (599)
Q Consensus 25 Y~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~iyl 104 (599)
|.+.+.||.|++|.||++.+..+++.+|||.+...... .....+.+|+..++.++|+|++++++.+... ...++
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~-----~~~~~ 74 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTE-KQREEFLREIRILKKLKHPNIVKLYGVFEDP-----EPLYL 74 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccch-HHHHHHHHHHHHHHhCCCCChhhheeeeecC-----CceEE
Confidence 67889999999999999999999999999998753222 2466788999999999999999999988433 47899
Q ss_pred EEecCCc-CHHHHHHhCCC-CCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCCCCC
Q 007541 105 VFELMES-DLHQVIKANDD-LTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPT 182 (599)
Q Consensus 105 V~E~~~g-~L~~~i~~~~~-lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~~~ 182 (599)
|+|++.+ +|.+++..... +++..+..++.|++.+|.+||+.+++|+||+|.||+++.++.++|+|||++.........
T Consensus 75 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~ 154 (225)
T smart00221 75 VMEYCEGGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSLGIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLAA 154 (225)
T ss_pred EEeccCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeeCceeeEecCcccc
Confidence 9999996 99999988766 899999999999999999999999999999999999999999999999999876443211
Q ss_pred cccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCC-CC-hhhHHHHHHH
Q 007541 183 AIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPG-KN-VVHQLDIMTD 245 (599)
Q Consensus 183 ~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g-~~-~~~~l~~I~~ 245 (599)
......++..|++||.+.. ...++.++|+|+|||++++|++|+.||.+ .+ .....+.|..
T Consensus 155 --~~~~~~~~~~~~~pe~~~~-~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~ 216 (225)
T smart00221 155 --LLKTVKGTPFYLAPEVLLG-GKGYGEAVDIWSLGVILYELLWGPEPFSGEGEFTSLLSDVWSF 216 (225)
T ss_pred --cccceeccCCcCCHhHhcC-CCCCCchhhHHHHHHHHHHHHHCCCCccccchhHHHHHHHHhc
Confidence 1234567888999998832 26788899999999999999999999987 33 3355555543
No 401
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.96 E-value=1.9e-28 Score=277.48 Aligned_cols=247 Identities=27% Similarity=0.452 Sum_probs=195.9
Q ss_pred EEEEEEeecCceEEEEEEECC-------CCcEEEEEEecCcccChhhHHHHHHHHHHHHhcC-CCCccccceeecCCCcC
Q 007541 26 KIEEVIGKGSYGVVCSAYDTR-------TGEKVAIKKINDIFEHVSDATRILREIKLLRLLR-HPDIVEIKHILLPPSRR 97 (599)
Q Consensus 26 ~i~~~LG~G~~g~V~~a~d~~-------tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~-HpnIv~l~~v~~~~s~~ 97 (599)
.+.+.||+|.||.|++|.-.. ....||||.++..... .+...+..|+.+|+.+. |+||+.+++++..
T Consensus 299 ~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~-~~~~~~~~El~~m~~~g~H~niv~llG~~t~---- 373 (609)
T KOG0200|consen 299 KLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASS-SEKKDLMSELNVLKELGKHPNIVNLLGACTQ---- 373 (609)
T ss_pred cccceeecccccceEeEEEeecccccccceEEEEEEecccccCc-HHHHHHHHHHHHHHHhcCCcchhhheeeecc----
Confidence 566799999999999997331 1457999998865444 66778899999999995 9999999999954
Q ss_pred CCccEEEEEecCC-cCHHHHHHhCC----------------CCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeC
Q 007541 98 EFKDIYVVFELME-SDLHQVIKAND----------------DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILAN 160 (599)
Q Consensus 98 ~~~~iylV~E~~~-g~L~~~i~~~~----------------~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~ 160 (599)
...+++|+||+. |+|..+++.++ .++..+...|.+||+.|++||++..+|||||-..|||+.
T Consensus 374 -~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAaRNVLi~ 452 (609)
T KOG0200|consen 374 -DGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVPCVHRDLAARNVLIT 452 (609)
T ss_pred -CCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCCccchhhhhhhEEec
Confidence 457999999999 89999998765 388899999999999999999999999999999999999
Q ss_pred CCCceeeeccCccccccCCCCCcccccccc--cCccccCccccccccCCCCcchhhHhHHHHHHHHHh-CCCCCCCCC-h
Q 007541 161 ADCKLKICDFGLARVAFNDTPTAIFWTDYV--ATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKN-V 236 (599)
Q Consensus 161 ~~~~lKL~DFGlA~~~~~~~~~~~~~t~~~--gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLlt-G~~pF~g~~-~ 236 (599)
.+..+||+|||+|+.......-.. .... -...|||||.+.. ..|+.++||||+|++|||+++ |..||+|-. .
T Consensus 453 ~~~~~kIaDFGlar~~~~~~~y~~--~~~~~~LP~kWmApEsl~~--~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~ 528 (609)
T KOG0200|consen 453 KNKVIKIADFGLARDHYNKDYYRT--KSSAGTLPVKWMAPESLFD--RVFTSKSDVWSFGILLWEIFTLGGTPYPGIPPT 528 (609)
T ss_pred CCCEEEEccccceeccCCCCceEe--cCCCCccceeecCHHHhcc--CcccccchhhHHHHHHHHHhhCCCCCCCCCCcH
Confidence 999999999999986433221110 1112 2445999999987 689999999999999999997 889998733 2
Q ss_pred hhHHHHHHHhcCCCCHHHHHHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCC
Q 007541 237 VHQLDIMTDLLGTPSPEAIARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKK 316 (599)
Q Consensus 237 ~~~l~~I~~~lG~p~~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (599)
.+.++.+.+ - .
T Consensus 529 ~~l~~~l~~------------------------------------------------------------------G---~ 539 (609)
T KOG0200|consen 529 EELLEFLKE------------------------------------------------------------------G---N 539 (609)
T ss_pred HHHHHHHhc------------------------------------------------------------------C---C
Confidence 222211110 0 0
Q ss_pred CCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 007541 317 PIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALA 354 (599)
Q Consensus 317 ~~~~~~~~~~~s~~a~dLL~~mL~~DP~~RpTa~e~L~ 354 (599)
. .......+++..++++.|+..+|++||+..++.+
T Consensus 540 r---~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~ 574 (609)
T KOG0200|consen 540 R---MEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVE 574 (609)
T ss_pred C---CCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHH
Confidence 0 0111346788999999999999999999999976
No 402
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=2.1e-28 Score=253.26 Aligned_cols=206 Identities=27% Similarity=0.404 Sum_probs=167.1
Q ss_pred CCcccccccCCCCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHH--HHhcCCCCccccc
Q 007541 11 ADVDFFTEYGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKL--LRLLRHPDIVEIK 88 (599)
Q Consensus 11 ~~~~~~~~~~~~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~i--L~~l~HpnIv~l~ 88 (599)
..+.++..-.++.+.++++.||+|.||.||+|. ..|+.||||++.. .+.....||.+| -..|+|+||+.++
T Consensus 199 SGlplLVQRTiarqI~L~e~IGkGRyGEVwrG~--wrGe~VAVKiF~s-----rdE~SWfrEtEIYqTvmLRHENILgFI 271 (513)
T KOG2052|consen 199 SGLPLLVQRTIARQIVLQEIIGKGRFGEVWRGR--WRGEDVAVKIFSS-----RDERSWFRETEIYQTVMLRHENILGFI 271 (513)
T ss_pred CCchhHhHHhhhheeEEEEEecCccccceeecc--ccCCceEEEEecc-----cchhhhhhHHHHHHHHHhccchhhhhh
Confidence 345677777889999999999999999999995 5699999999863 223334456555 4566999999998
Q ss_pred eeecCCCcCCCccEEEEEecCC-cCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccC--------ceEeecCCCCcEEe
Q 007541 89 HILLPPSRREFKDIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTA--------NVFHRDLKPKNILA 159 (599)
Q Consensus 89 ~v~~~~s~~~~~~iylV~E~~~-g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~--------gIvHrDLKP~NILv 159 (599)
..-.... ..-..++||++|-+ |+|++++..+ .++-+....++..++.||+|||.. .|.|||||..||||
T Consensus 272 aaD~~~~-gs~TQLwLvTdYHe~GSL~DyL~r~-tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILV 349 (513)
T KOG2052|consen 272 AADNKDN-GSWTQLWLVTDYHEHGSLYDYLNRN-TVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILV 349 (513)
T ss_pred hccccCC-CceEEEEEeeecccCCcHHHHHhhc-cCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEE
Confidence 7754332 34468999999999 8999999884 799999999999999999999954 39999999999999
Q ss_pred CCCCceeeeccCccccccCCCC-CcccccccccCccccCcccccccc-----CCCCcchhhHhHHHHHHHHHh
Q 007541 160 NADCKLKICDFGLARVAFNDTP-TAIFWTDYVATRWYRAPELCGSFF-----SKYTPAIDIWSIGCIFAELLT 226 (599)
Q Consensus 160 ~~~~~lKL~DFGlA~~~~~~~~-~~~~~t~~~gt~~Y~APE~l~~~~-----~~ys~~~DIWSlG~Il~eLlt 226 (599)
..||..-|+|+|||....+++. ..+..+..+||-.|||||+|...- ..| ..+||||+|.|++|++.
T Consensus 350 Kkn~~C~IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesy-k~ADIYafgLVlWEiar 421 (513)
T KOG2052|consen 350 KKNGTCCIADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESY-KRADIYAFGLVLWEIAR 421 (513)
T ss_pred ccCCcEEEeeceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhh-hHHHHHHHHHHHHHHHH
Confidence 9999999999999987765532 234456789999999999985410 111 35899999999999985
No 403
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=99.95 E-value=6.2e-28 Score=263.71 Aligned_cols=247 Identities=25% Similarity=0.409 Sum_probs=198.0
Q ss_pred EEEEEEeecCceEEEEEEECCCCc----EEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCcc
Q 007541 26 KIEEVIGKGSYGVVCSAYDTRTGE----KVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKD 101 (599)
Q Consensus 26 ~i~~~LG~G~~g~V~~a~d~~tg~----~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~ 101 (599)
+..++||+|+||+||++...-.|+ +||||++.. +...+....++.|..+|..|.|||+++|++++....
T Consensus 699 kk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~-~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~------ 771 (1177)
T KOG1025|consen 699 KKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIE-FTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST------ 771 (1177)
T ss_pred hhhceeccccceeEEeeeEecCCceecceeEEEEeec-cCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch------
Confidence 335899999999999999876664 588887753 344455678899999999999999999999996543
Q ss_pred EEEEEecCC-cCHHHHHHhC-CCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCC
Q 007541 102 IYVVFELME-SDLHQVIKAN-DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFND 179 (599)
Q Consensus 102 iylV~E~~~-g~L~~~i~~~-~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~ 179 (599)
+-||++||+ |.|.++++.+ +.+.......|++||++|++|||.++++||||-..|+||.+-..+||.|||+|+....+
T Consensus 772 ~qlvtq~mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d 851 (1177)
T KOG1025|consen 772 LQLVTQLMPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPD 851 (1177)
T ss_pred HHHHHHhcccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheeecCCCeEEEEecchhhccCcc
Confidence 789999999 7999999876 47889999999999999999999999999999999999999999999999999987554
Q ss_pred CCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHh-CCCCCCCCChhhHHHHHHHhcCCCCHHHHHHH
Q 007541 180 TPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLLGTPSPEAIARV 258 (599)
Q Consensus 180 ~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLlt-G~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~ 258 (599)
..... ...-...+-|+|=|.+.. ..|+.++||||+||++|||+| |..|+.|....+.-+.+.+ +
T Consensus 852 ~~ey~-~~~gK~pikwmale~i~~--~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~dlle~----g-------- 916 (1177)
T KOG1025|consen 852 EKEYS-APGGKVPIKWMALESIRI--RKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPDLLEK----G-------- 916 (1177)
T ss_pred ccccc-ccccccCcHHHHHHHhhc--cCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhhHHHhc----c--------
Confidence 43221 112233456888887765 689999999999999999998 8899988765443222211 0
Q ss_pred hhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHh
Q 007541 259 CLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERM 338 (599)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~m 338 (599)
.+ ....+..+-++.-++-+|
T Consensus 917 -------------------------------------------------------eR-----LsqPpiCtiDVy~~mvkC 936 (1177)
T KOG1025|consen 917 -------------------------------------------------------ER-----LSQPPICTIDVYMVMVKC 936 (1177)
T ss_pred -------------------------------------------------------cc-----CCCCCCccHHHHHHHHHH
Confidence 00 112245677889999999
Q ss_pred cccCCCCCCCHHHHhc
Q 007541 339 LAFEPKDRPTAEEALA 354 (599)
Q Consensus 339 L~~DP~~RpTa~e~L~ 354 (599)
|..|+..||+++++.+
T Consensus 937 wmid~~~rp~fkel~~ 952 (1177)
T KOG1025|consen 937 WMIDADSRPTFKELAE 952 (1177)
T ss_pred hccCcccCccHHHHHH
Confidence 9999999999999876
No 404
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.95 E-value=8.1e-29 Score=277.98 Aligned_cols=269 Identities=28% Similarity=0.375 Sum_probs=202.3
Q ss_pred Cce-EEEEEEeecCceEEEEEEECCCCcEEEEEEecC---cccChhh-HHHHHHHHHHHHhcCCCCccccceeecCCCcC
Q 007541 23 SRY-KIEEVIGKGSYGVVCSAYDTRTGEKVAIKKIND---IFEHVSD-ATRILREIKLLRLLRHPDIVEIKHILLPPSRR 97 (599)
Q Consensus 23 ~rY-~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~---~~~~~~~-~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~ 97 (599)
..| .-..++|.|++|.|+.+....-.+.++.|.+.. ....... ...+..|+-+-..+.|+|++..+.++...
T Consensus 317 ~~y~~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~--- 393 (601)
T KOG0590|consen 317 EKYGKPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEI--- 393 (601)
T ss_pred cccCCccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhc---
Confidence 345 446789999999999998887777777776541 1111111 22266677777888999998888777433
Q ss_pred CCccEEEEEecCCcCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCcccccc
Q 007541 98 EFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAF 177 (599)
Q Consensus 98 ~~~~iylV~E~~~g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~ 177 (599)
..++-+||||++||+.++...+.++..++..++.||+.||+|||+.||.||||||+|+|+..+|.+||+|||.+....
T Consensus 394 --~~~~~~mE~~~~Dlf~~~~~~~~~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~~~~g~lki~Dfg~~~vf~ 471 (601)
T KOG0590|consen 394 --DGILQSMEYCPYDLFSLVMSNGKLTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLLVTENGILKIIDFGAASVFR 471 (601)
T ss_pred --ccchhhhhcccHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhcCceeccCccccEEEecCCceEEeecCcceeec
Confidence 233444999999999999998889999999999999999999999999999999999999999999999999998764
Q ss_pred CCCCC-cccccccccCccccCccccccccCCCCc-chhhHhHHHHHHHHHhCCCCCCCCChhhHHH-HHHHhcCCCCHHH
Q 007541 178 NDTPT-AIFWTDYVATRWYRAPELCGSFFSKYTP-AIDIWSIGCIFAELLTGKPLFPGKNVVHQLD-IMTDLLGTPSPEA 254 (599)
Q Consensus 178 ~~~~~-~~~~t~~~gt~~Y~APE~l~~~~~~ys~-~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~-~I~~~lG~p~~e~ 254 (599)
..... .....+.+|+..|+|||++.+ ..|++ .+||||+|+|+..|.+|+.||.-....++.. .+
T Consensus 472 ~~~e~~~~~~~g~~gS~pY~apE~~~~--~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~----------- 538 (601)
T KOG0590|consen 472 YPWEKNIHESSGIVGSDPYLAPEVLTG--KEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTN----------- 538 (601)
T ss_pred cCcchhhhhhcCcccCCcCcCcccccc--cccCcchhhhhhccceEEEEecCCCccccccccccchhhh-----------
Confidence 43322 234567899999999999977 56766 5799999999999999999986543322110 00
Q ss_pred HHHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHH
Q 007541 255 IARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRL 334 (599)
Q Consensus 255 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dL 334 (599)
.+..+ .........++..++...+.+
T Consensus 539 -------------~~~~~-----------------------------------------~~~~~~~~~~~~~lp~~~~~~ 564 (601)
T KOG0590|consen 539 -------------NYSDQ-----------------------------------------RNIFEGPNRLLSLLPRETRII 564 (601)
T ss_pred -------------ccccc-----------------------------------------cccccChHHHHHhchhhHHHH
Confidence 00000 000111112223455678899
Q ss_pred HHHhcccCCCCCCCHHHHhcCccccCccc
Q 007541 335 LERMLAFEPKDRPTAEEALADPYFKGLAK 363 (599)
Q Consensus 335 L~~mL~~DP~~RpTa~e~L~HP~f~~~~~ 363 (599)
|.+||++||.+|+|+++||+.+||+.+..
T Consensus 565 ~~~~l~~~P~~R~ti~~i~~d~W~~~i~~ 593 (601)
T KOG0590|consen 565 IYRMLQLDPTKRITIEQILNDEWIRSIEC 593 (601)
T ss_pred HHHHccCChhheecHHHHhhChHhhhcce
Confidence 99999999999999999999999998754
No 405
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.94 E-value=1.1e-26 Score=221.25 Aligned_cols=107 Identities=25% Similarity=0.330 Sum_probs=94.5
Q ss_pred cCHHHHHHhC-CCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCCCCCccccccc
Q 007541 111 SDLHQVIKAN-DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDY 189 (599)
Q Consensus 111 g~L~~~i~~~-~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~~~~~~~t~~ 189 (599)
|+|.+++... ..+++..++.++.||+.||.|||+.+ ||+|||++.++.+|+ ||+++..... ..
T Consensus 1 GsL~~~l~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~~~~~~~~~--fG~~~~~~~~--------~~ 64 (176)
T smart00750 1 VSLADILEVRGRPLNEEEIWAVCLQCLRALRELHRQA------KSGNILLTWDGLLKL--DGSVAFKTPE--------QS 64 (176)
T ss_pred CcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeEcCccceee--ccceEeeccc--------cC
Confidence 6899999874 46999999999999999999999999 999999999999999 9999765321 22
Q ss_pred ccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCC
Q 007541 190 VATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKN 235 (599)
Q Consensus 190 ~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~ 235 (599)
.+|+.|+|||++.+ ..|+.++||||+|||+|+|++|+.||....
T Consensus 65 ~g~~~y~aPE~~~~--~~~~~~~DiwSlG~il~elltg~~p~~~~~ 108 (176)
T smart00750 65 RVDPYFMAPEVIQG--QSYTEKADIYSLGITLYEALDYELPYNEER 108 (176)
T ss_pred CCcccccChHHhcC--CCCcchhhHHHHHHHHHHHHhCCCCccccc
Confidence 68899999999977 679999999999999999999999997654
No 406
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.94 E-value=4.3e-25 Score=223.65 Aligned_cols=266 Identities=34% Similarity=0.522 Sum_probs=206.0
Q ss_pred eEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChh-hHHHHHHHHHHHHhcCCC-CccccceeecCCCcCCCccE
Q 007541 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVS-DATRILREIKLLRLLRHP-DIVEIKHILLPPSRREFKDI 102 (599)
Q Consensus 25 Y~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~-~~~~i~rEi~iL~~l~Hp-nIv~l~~v~~~~s~~~~~~i 102 (599)
|.+.+.||.|+||.||++.+. ..+++|.+........ ....+.+|+.++..+.|+ +|+++.+.+... ...
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~-----~~~ 73 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDE-----GSL 73 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec---cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecC-----CEE
Confidence 889999999999999999987 8899999986555543 567889999999999988 799999999333 248
Q ss_pred EEEEecCC-cCHHHHHHhCC---CCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCC-ceeeeccCcccccc
Q 007541 103 YVVFELME-SDLHQVIKAND---DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADC-KLKICDFGLARVAF 177 (599)
Q Consensus 103 ylV~E~~~-g~L~~~i~~~~---~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~-~lKL~DFGlA~~~~ 177 (599)
++|++++. ++|.+++.... .+++..+..++.|++.++.|+|+.|++||||||+|||++..+ .++++|||+++...
T Consensus 74 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~ 153 (384)
T COG0515 74 YLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLP 153 (384)
T ss_pred EEEEecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeecCCCCeEEEeccCcceecC
Confidence 99999999 58887777764 799999999999999999999999999999999999999998 79999999998543
Q ss_pred CCCCCc---ccccccccCccccCcccccccc-CCCCcchhhHhHHHHHHHHHhCCCCCCCCCh---hhHHHHHHHhcCCC
Q 007541 178 NDTPTA---IFWTDYVATRWYRAPELCGSFF-SKYTPAIDIWSIGCIFAELLTGKPLFPGKNV---VHQLDIMTDLLGTP 250 (599)
Q Consensus 178 ~~~~~~---~~~t~~~gt~~Y~APE~l~~~~-~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~---~~~l~~I~~~lG~p 250 (599)
...... ......++|.+|+|||.+.+.. ..++..+|+||+|++++++++|..||..... ......+....+.+
T Consensus 154 ~~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 233 (384)
T COG0515 154 DPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTP 233 (384)
T ss_pred CCCccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCc
Confidence 332211 1346779999999999987621 3688899999999999999999999877653 22222221111111
Q ss_pred CHHHHHHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCC-CCCCH
Q 007541 251 SPEAIARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKF-PNANP 329 (599)
Q Consensus 251 ~~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~ 329 (599)
. ......... .....
T Consensus 234 ~----------------------------------------------------------------~~~~~~~~~~~~~~~ 249 (384)
T COG0515 234 S----------------------------------------------------------------LASPLSPSNPELISK 249 (384)
T ss_pred c----------------------------------------------------------------cccccCccccchhhH
Confidence 0 000000000 12235
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHhcCccccCcc
Q 007541 330 LALRLLERMLAFEPKDRPTAEEALADPYFKGLA 362 (599)
Q Consensus 330 ~a~dLL~~mL~~DP~~RpTa~e~L~HP~f~~~~ 362 (599)
.+.+++.+++..+|..|.+..+...++|.....
T Consensus 250 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~ 282 (384)
T COG0515 250 AASDLLKKLLAKDPKNRLSSSSDLSHDLLAHLK 282 (384)
T ss_pred HHHHHHHHHHhcCchhcCCHHHHhhchHhhCcc
Confidence 688999999999999999999999997776543
No 407
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.92 E-value=4.3e-25 Score=233.78 Aligned_cols=181 Identities=20% Similarity=0.228 Sum_probs=135.5
Q ss_pred CCCCceEEEEEEeecCceEEEEEEECC-CCcEEEEEEecCccc---ChhhHHHHHHHHHHHHhcCCCCccccceeecCCC
Q 007541 20 GEGSRYKIEEVIGKGSYGVVCSAYDTR-TGEKVAIKKINDIFE---HVSDATRILREIKLLRLLRHPDIVEIKHILLPPS 95 (599)
Q Consensus 20 ~~~~rY~i~~~LG~G~~g~V~~a~d~~-tg~~vAIK~i~~~~~---~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s 95 (599)
-..++|.+.+.||+|+||+||+|+++. +++.||||++..... .......+.+|+.+|+.++|+|++..+..+
T Consensus 15 ~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~---- 90 (365)
T PRK09188 15 ALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT---- 90 (365)
T ss_pred cccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc----
Confidence 346889999999999999999999887 688889998753211 222356688999999999999998533221
Q ss_pred cCCCccEEEEEecCCc-CHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecC-CCCcEEeCCCCceeeeccCcc
Q 007541 96 RREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDL-KPKNILANADCKLKICDFGLA 173 (599)
Q Consensus 96 ~~~~~~iylV~E~~~g-~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDL-KP~NILv~~~~~lKL~DFGlA 173 (599)
...||||||++| +|. .+... . ...++.|++++|.|||++||+|||| ||+|||++.++.+||+|||+|
T Consensus 91 ----~~~~LVmE~~~G~~L~-~~~~~---~---~~~~~~~i~~aL~~lH~~gIiHrDL~KP~NILv~~~~~ikLiDFGlA 159 (365)
T PRK09188 91 ----GKDGLVRGWTEGVPLH-LARPH---G---DPAWFRSAHRALRDLHRAGITHNDLAKPQNWLMGPDGEAAVIDFQLA 159 (365)
T ss_pred ----CCcEEEEEccCCCCHH-HhCcc---c---hHHHHHHHHHHHHHHHHCCCeeCCCCCcceEEEcCCCCEEEEECccc
Confidence 247999999996 675 22211 1 1568899999999999999999999 999999999999999999999
Q ss_pred ccccCCCCCcc-----cccccccCccccCccccccccC----CCCcchhhH
Q 007541 174 RVAFNDTPTAI-----FWTDYVATRWYRAPELCGSFFS----KYTPAIDIW 215 (599)
Q Consensus 174 ~~~~~~~~~~~-----~~t~~~gt~~Y~APE~l~~~~~----~ys~~~DIW 215 (599)
+.......... ..+..+++..|+|||.+..... ..+...|-|
T Consensus 160 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~~dgW 210 (365)
T PRK09188 160 SVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTPRERKILARKSLPSRIW 210 (365)
T ss_pred eecccCcchhhhhhhhhhhhhhccCccCCcccCChhhhccccccccccCcE
Confidence 87643322111 1245678888999998754212 233446766
No 408
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.89 E-value=3e-23 Score=211.80 Aligned_cols=253 Identities=18% Similarity=0.314 Sum_probs=196.0
Q ss_pred CCceEEEEEEeecCceEEEEEEECCC-----CcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCc
Q 007541 22 GSRYKIEEVIGKGSYGVVCSAYDTRT-----GEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSR 96 (599)
Q Consensus 22 ~~rY~i~~~LG~G~~g~V~~a~d~~t-----g~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~ 96 (599)
..|+++..++.+|.||.||.|+.+.. .+.|-+|.++.. ....+...++.|-.+|..+.|||+..+.++...
T Consensus 283 r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~-AS~iQv~~~L~es~lly~~sH~nll~V~~V~ie--- 358 (563)
T KOG1024|consen 283 RCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQH-ASQIQVNLLLQESMLLYGASHPNLLSVLGVSIE--- 358 (563)
T ss_pred hhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhc-ccHHHHHHHHHHHHHHhcCcCCCccceeEEEee---
Confidence 46788899999999999999976543 244667766532 223345678899999999999999999999854
Q ss_pred CCCccEEEEEecCC-cCHHHHHHh------C--CCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceee
Q 007541 97 REFKDIYVVFELME-SDLHQVIKA------N--DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKI 167 (599)
Q Consensus 97 ~~~~~iylV~E~~~-g~L~~~i~~------~--~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL 167 (599)
+...-++++.+++ |+|..++.. + ..++..+.-.+..||..|+.|||+.||||.||-..|.+|++.-++||
T Consensus 359 -~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiAaRNCvIdd~LqVkl 437 (563)
T KOG1024|consen 359 -DYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAARNCVIDDQLQVKL 437 (563)
T ss_pred -ccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhhhhcceehhheeEEe
Confidence 3345678899999 899999972 1 24666777788999999999999999999999999999999999999
Q ss_pred eccCccccccCCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHh-CCCCCCCCChhhHHHHHHHh
Q 007541 168 CDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDL 246 (599)
Q Consensus 168 ~DFGlA~~~~~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLlt-G~~pF~g~~~~~~l~~I~~~ 246 (599)
+|=.++|-.+.......-. .--.+.-||+||.+.. ..|+.++|+||||++|+||+| |+.|+-.-+..+....+.+-
T Consensus 438 tDsaLSRDLFP~DYhcLGD-nEnRPvkWMslEal~n--~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm~~ylkdG 514 (563)
T KOG1024|consen 438 TDSALSRDLFPGDYHCLGD-NENRPVKWMSLEALQN--SHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEMEHYLKDG 514 (563)
T ss_pred ccchhccccCcccccccCC-CCCCcccccCHHHHhh--hhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHHHHHHhcc
Confidence 9999999876544322110 1123456999999987 789999999999999999997 88888766655443332210
Q ss_pred cCCCCHHHHHHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCC
Q 007541 247 LGTPSPEAIARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPN 326 (599)
Q Consensus 247 lG~p~~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (599)
.-+.+ .-+
T Consensus 515 -----------------------------------------------------------------------yRlaQ-P~N 522 (563)
T KOG1024|consen 515 -----------------------------------------------------------------------YRLAQ-PFN 522 (563)
T ss_pred -----------------------------------------------------------------------ceecC-CCC
Confidence 00111 125
Q ss_pred CCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 007541 327 ANPLALRLLERMLAFEPKDRPTAEEALA 354 (599)
Q Consensus 327 ~s~~a~dLL~~mL~~DP~~RpTa~e~L~ 354 (599)
.++++..++.=|+..+|++||+.+|+..
T Consensus 523 CPDeLf~vMacCWallpeeRPsf~Qlv~ 550 (563)
T KOG1024|consen 523 CPDELFTVMACCWALLPEERPSFSQLVI 550 (563)
T ss_pred CcHHHHHHHHHHHhcCcccCCCHHHHHH
Confidence 7888999999999999999999999864
No 409
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.89 E-value=2.2e-22 Score=211.55 Aligned_cols=206 Identities=22% Similarity=0.277 Sum_probs=164.9
Q ss_pred ceEEEEEEeecCceEEEEEEECCCC-cEEEEEEecCcccChhhHHHHHHHHHHHHhcCC----CCccccceeecCCCcCC
Q 007541 24 RYKIEEVIGKGSYGVVCSAYDTRTG-EKVAIKKINDIFEHVSDATRILREIKLLRLLRH----PDIVEIKHILLPPSRRE 98 (599)
Q Consensus 24 rY~i~~~LG~G~~g~V~~a~d~~tg-~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~H----pnIv~l~~v~~~~s~~~ 98 (599)
+|.+.+.||+|+||.||.+.+..++ ..+|+|.......... ..+..|+.+|..+.. .++..+++... ..
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~--~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~----~~ 92 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKP--SVLKIEIQVLKKLEKKNGPSHFPKLLDHGR----ST 92 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCC--ccchhHHHHHHHHhhhcCCCCCCEEEEecc----CC
Confidence 9999999999999999999998875 6788887654322211 156678999888873 57777777763 23
Q ss_pred CccEEEEEecCCcCHHHHHHhC--CCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCC-----CceeeeccC
Q 007541 99 FKDIYVVFELMESDLHQVIKAN--DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANAD-----CKLKICDFG 171 (599)
Q Consensus 99 ~~~iylV~E~~~g~L~~~i~~~--~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~-----~~lKL~DFG 171 (599)
...-||||++++.+|.++.... +.++...+..++.|++.+|++||+.|++||||||.|+++... ..+.|.|||
T Consensus 93 ~~~~~iVM~l~G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfG 172 (322)
T KOG1164|consen 93 EDFNFIVMSLLGPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFG 172 (322)
T ss_pred CceeEEEEeccCccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcCcccCCcCHHHeeecCCCCcccceEEEEecC
Confidence 3467999999999999988654 489999999999999999999999999999999999999865 469999999
Q ss_pred ccc--cccCCCCC---ccc--ccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChh
Q 007541 172 LAR--VAFNDTPT---AIF--WTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVV 237 (599)
Q Consensus 172 lA~--~~~~~~~~---~~~--~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~ 237 (599)
+|+ ........ ... .....||..|.++....+ ...+...|+||++.++.+|+.|..||.+....
T Consensus 173 lar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~--~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~ 243 (322)
T KOG1164|consen 173 LARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLG--IEQGRRDDLESLFYMLLELLKGSLPWEALEMT 243 (322)
T ss_pred CCccccccCCCCcccccCCCCccCCCCccccccHHHhCC--CccCCchhhhhHHHHHHHHhcCCCCCcccccc
Confidence 998 43222111 010 123569999999998877 67889999999999999999999999776543
No 410
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.89 E-value=6e-23 Score=198.26 Aligned_cols=217 Identities=25% Similarity=0.344 Sum_probs=169.6
Q ss_pred cccCCCCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCC-CCccccceeecCCC
Q 007541 17 TEYGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRH-PDIVEIKHILLPPS 95 (599)
Q Consensus 17 ~~~~~~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~H-pnIv~l~~v~~~~s 95 (599)
.++-++++|.++++||+|+||.+|.|....+|+.||||+-+....+. .+..|..+.+.|++ ..|..+..+.
T Consensus 9 ~~~iv~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~hp----qL~yEskvY~iL~~g~GiP~i~~y~---- 80 (341)
T KOG1163|consen 9 EELIVGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAKHP----QLLYESKVYRILQGGVGIPHIRHYG---- 80 (341)
T ss_pred hhheeccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCCCc----chhHHHHHHHHhccCCCCchhhhhc----
Confidence 44677899999999999999999999999999999999865433322 35578999998885 5566555554
Q ss_pred cCCCccEEEEEecCCcCHHHHHH-hCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCC--C-CceeeeccC
Q 007541 96 RREFKDIYVVFELMESDLHQVIK-ANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANA--D-CKLKICDFG 171 (599)
Q Consensus 96 ~~~~~~iylV~E~~~g~L~~~i~-~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~--~-~~lKL~DFG 171 (599)
.+..+-.|||++++.+|.+++. .+..++...+.-++-|++.-|+|+|.++.+||||||+|+|..- . .++-|+|||
T Consensus 81 -~e~~ynvlVMdLLGPsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFG 159 (341)
T KOG1163|consen 81 -TEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDNFLMGLGRHCNKLYLIDFG 159 (341)
T ss_pred -cccccceeeeeccCccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHHhhccccccCCccceeeccccccceEEEEecc
Confidence 3345678999999988888775 3457899999999999999999999999999999999999653 3 459999999
Q ss_pred ccccccCCCCC-c---ccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHH
Q 007541 172 LARVAFNDTPT-A---IFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMT 244 (599)
Q Consensus 172 lA~~~~~~~~~-~---~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~ 244 (599)
||+........ . ...+...||..|.+=-...+ ...+...|+-|+|.+|..+.-|..||.|-......++..
T Consensus 160 LaKky~d~~t~~HIpyre~r~ltGTaRYASinAh~g--~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~QKyE 234 (341)
T KOG1163|consen 160 LAKKYRDIRTRQHIPYREDRNLTGTARYASINAHLG--IEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQKYE 234 (341)
T ss_pred chhhhccccccccCccccCCccceeeeehhhhhhhh--hhhhhhhhhhhhcceeeeeecCCCcccccchhhHHHHHH
Confidence 99876432211 1 11235678889988766554 456788999999999999999999999875544443333
No 411
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.89 E-value=1.4e-23 Score=236.19 Aligned_cols=201 Identities=28% Similarity=0.413 Sum_probs=154.1
Q ss_pred ceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCccc--ChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCcc
Q 007541 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFE--HVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKD 101 (599)
Q Consensus 24 rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~--~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~ 101 (599)
.|...+.||++.|=+|++|.|.. ..|+||++-+... .-....+-++|++ ...++|||++.+..+.. ..+.
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~e--G~vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~-----t~kA 95 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDRE--GLVVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLV-----TDKA 95 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCC--ceEEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHH-----hhHH
Confidence 78999999999999999997643 3499998854321 1122334446666 66678999999877753 3346
Q ss_pred EEEEEecCCcCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccc--cCC
Q 007541 102 IYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVA--FND 179 (599)
Q Consensus 102 iylV~E~~~g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~--~~~ 179 (599)
-|||-+|...+|++.+...+-+..-+.+.|+.||+.||+-||..||+|||||.+||||++=+=+.|+||..-+.. ..+
T Consensus 96 AylvRqyvkhnLyDRlSTRPFL~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeD 175 (1431)
T KOG1240|consen 96 AYLVRQYVKHNLYDRLSTRPFLVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSENILITSWNWLYLTDFASFKPTYLPED 175 (1431)
T ss_pred HHHHHHHHhhhhhhhhccchHHHHHHHHHHHHHHHHHHHHHHHcCccccccccceEEEeeechhhhhcccccCCccCCCC
Confidence 799999999999999999988999999999999999999999999999999999999998878999999876532 122
Q ss_pred CCCc--ccccccccCccccCccccccc---------cCCCCcchhhHhHHHHHHHHHh-CCCCCC
Q 007541 180 TPTA--IFWTDYVATRWYRAPELCGSF---------FSKYTPAIDIWSIGCIFAELLT-GKPLFP 232 (599)
Q Consensus 180 ~~~~--~~~t~~~gt~~Y~APE~l~~~---------~~~ys~~~DIWSlG~Il~eLlt-G~~pF~ 232 (599)
++.. .++.+...-.+|.|||-+... ....+++.||||+||+++||++ |+|||.
T Consensus 176 NPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~ 240 (1431)
T KOG1240|consen 176 NPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFT 240 (1431)
T ss_pred CcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCccc
Confidence 2221 122222233469999965321 0126788999999999999998 799995
No 412
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.88 E-value=5e-24 Score=230.16 Aligned_cols=240 Identities=26% Similarity=0.420 Sum_probs=195.2
Q ss_pred EEeecCceEEEEEEE---CCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcC-CCCccccceeecCCCcCCCccEEEE
Q 007541 30 VIGKGSYGVVCSAYD---TRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLR-HPDIVEIKHILLPPSRREFKDIYVV 105 (599)
Q Consensus 30 ~LG~G~~g~V~~a~d---~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~-HpnIv~l~~v~~~~s~~~~~~iylV 105 (599)
++|.|+||.|++++- ...|..+|+|+.++.........+...|-.++..++ ||.++++...+..+ ..+|++
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~-----~kl~l~ 75 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTD-----GKLYLI 75 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccc-----cchhHh
Confidence 478999999998753 345788999998764433333334456788888887 99999999998554 479999
Q ss_pred EecCCc-CHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCCCCCcc
Q 007541 106 FELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAI 184 (599)
Q Consensus 106 ~E~~~g-~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~~~~~ 184 (599)
+++..| +|+..+.....+.+...+.+...++-+++++|+.+|+|||+|++||+++.+|.+|+.|||+++..-...
T Consensus 76 ld~~rgg~lft~l~~~~~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~---- 151 (612)
T KOG0603|consen 76 LDFLRGGDLFTRLSKEVMFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEK---- 151 (612)
T ss_pred hhhcccchhhhccccCCchHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceeecccCccccCCchhhhHhHhhh----
Confidence 999995 999998888889999999999999999999999999999999999999999999999999998653322
Q ss_pred cccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHH-hcCCCCHHHHHHHhhhhh
Q 007541 185 FWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTD-LLGTPSPEAIARVCLLLN 263 (599)
Q Consensus 185 ~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~-~lG~p~~e~i~~~~~~~~ 263 (599)
-.|||..|||||++.+ ...++|.||+|+++++|++|..+|.+ +....|.+ .++.|
T Consensus 152 ---~~cgt~eymApEI~~g----h~~a~D~ws~gvl~felltg~~pf~~----~~~~~Il~~~~~~p------------- 207 (612)
T KOG0603|consen 152 ---IACGTYEYRAPEIING----HLSAADWWSFGVLAFELLTGTLPFGG----DTMKRILKAELEMP------------- 207 (612)
T ss_pred ---hcccchhhhhhHhhhc----cCCcccchhhhhhHHHHhhCCCCCch----HHHHHHhhhccCCc-------------
Confidence 2289999999999863 56899999999999999999999987 33333332 11111
Q ss_pred hhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHhcccCC
Q 007541 264 IIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEP 343 (599)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL~~DP 343 (599)
...+..+.+++..|+..+|
T Consensus 208 -------------------------------------------------------------~~l~~~a~~~~~~l~~r~p 226 (612)
T KOG0603|consen 208 -------------------------------------------------------------RELSAEARSLFRQLFKRNP 226 (612)
T ss_pred -------------------------------------------------------------hhhhHHHHHHHHHHHhhCH
Confidence 1345679999999999999
Q ss_pred CCCCC-----HHHHhcCccccCccc
Q 007541 344 KDRPT-----AEEALADPYFKGLAK 363 (599)
Q Consensus 344 ~~RpT-----a~e~L~HP~f~~~~~ 363 (599)
..|.- +.|+++|+||+.+..
T Consensus 227 ~nrLg~~~~~~~eik~h~f~~~i~~ 251 (612)
T KOG0603|consen 227 ENRLGAGPDGVDEIKQHEFFQSIDW 251 (612)
T ss_pred HHHhccCcchhHHHhccchheeeeH
Confidence 99975 589999999998644
No 413
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.88 E-value=3.2e-23 Score=233.43 Aligned_cols=229 Identities=28% Similarity=0.410 Sum_probs=172.8
Q ss_pred CCCCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCC
Q 007541 20 GEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREF 99 (599)
Q Consensus 20 ~~~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~ 99 (599)
.....|..++.|..|+||-||+.+|+.+.+.+|+ +|++. ..++|- +|.....|
T Consensus 80 p~e~df~~IklisngAygavylvrh~~trqrfa~-kiNkq-------~lilRn--ilt~a~np----------------- 132 (1205)
T KOG0606|consen 80 PSESDFNTIKLISNGAYGAVYLVRHKETRQRFAM-KINKQ-------NLILRN--ILTFAGNP----------------- 132 (1205)
T ss_pred CCccccceeEeeccCCCCceeeeeccccccchhh-ccccc-------chhhhc--cccccCCc-----------------
Confidence 3457789999999999999999999999999999 44421 111111 11111122
Q ss_pred ccEEEEEecCCcCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCC
Q 007541 100 KDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFND 179 (599)
Q Consensus 100 ~~iylV~E~~~g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~ 179 (599)
+.| ||-..+++.-+.++.+. +.+++|||+-||+|||+||+|+||..-|++|++|||+++.....
T Consensus 133 ---fvv-----gDc~tllk~~g~lPvdm--------vla~Eylh~ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms 196 (1205)
T KOG0606|consen 133 ---FVV-----GDCATLLKNIGPLPVDM--------VLAVEYLHSYGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMS 196 (1205)
T ss_pred ---cee-----chhhhhcccCCCCcchh--------hHHhHhhccCCeecCCCCCCcceeeecccccccchhhhhhhhhh
Confidence 222 55556666656666544 77899999999999999999999999999999999999864322
Q ss_pred CCCc------------ccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhc
Q 007541 180 TPTA------------IFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLL 247 (599)
Q Consensus 180 ~~~~------------~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~l 247 (599)
..+. ..-...|||+.|+|||++.. ..|+..+|.|++|+|+||.|-|..||.|+...+.+..++...
T Consensus 197 ~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilr--qgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd~ 274 (1205)
T KOG0606|consen 197 LATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILR--QGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDD 274 (1205)
T ss_pred ccchhhhcchHHHHHHhhhccccCCccccChhhhhh--hccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhhh
Confidence 2111 11134689999999999987 789999999999999999999999999998877665554322
Q ss_pred CCCCHHHHHHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCC
Q 007541 248 GTPSPEAIARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNA 327 (599)
Q Consensus 248 G~p~~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (599)
.. +.+.-...
T Consensus 275 i~----------------------------------------------------------------------wpE~dea~ 284 (1205)
T KOG0606|consen 275 IE----------------------------------------------------------------------WPEEDEAL 284 (1205)
T ss_pred cc----------------------------------------------------------------------ccccCcCC
Confidence 11 11112346
Q ss_pred CHHHHHHHHHhcccCCCCCC---CHHHHhcCccccCccc
Q 007541 328 NPLALRLLERMLAFEPKDRP---TAEEALADPYFKGLAK 363 (599)
Q Consensus 328 s~~a~dLL~~mL~~DP~~Rp---Ta~e~L~HP~f~~~~~ 363 (599)
.+++.+||.++|+.+|..|. .+-++.+|+||+.+..
T Consensus 285 p~Ea~dli~~LL~qnp~~Rlgt~ga~evk~h~ff~~LDw 323 (1205)
T KOG0606|consen 285 PPEAQDLIEQLLRQNPLCRLGTGGALEVKQHGFFQLLDW 323 (1205)
T ss_pred CHHHHHHHHHHHHhChHhhcccchhhhhhhccceeeccc
Confidence 78899999999999999994 6888999999998743
No 414
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.88 E-value=2.2e-22 Score=205.17 Aligned_cols=207 Identities=21% Similarity=0.279 Sum_probs=133.6
Q ss_pred CceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCccc-ChhhHHHHHHHHHHHHhcCC----------CCccccceee
Q 007541 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFE-HVSDATRILREIKLLRLLRH----------PDIVEIKHIL 91 (599)
Q Consensus 23 ~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~-~~~~~~~i~rEi~iL~~l~H----------pnIv~l~~v~ 91 (599)
..+...+.||.|++++||.+.|..||+.+|+|++..... .....+.+.+|.-....+.+ -.++..+++.
T Consensus 12 r~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~ 91 (288)
T PF14531_consen 12 RTLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLL 91 (288)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEE
T ss_pred eEEEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEE
Confidence 356778999999999999999999999999998853322 22234555555544333222 1233333333
Q ss_pred cCCCc-------C--CCc---cEEEEEecCCcCHHHHHHh---CCCC--C-HHHH-HHHHHHHHhhhhhcccCceEeecC
Q 007541 92 LPPSR-------R--EFK---DIYVVFELMESDLHQVIKA---NDDL--T-PEHY-QFFLYQLLRGLKYIHTANVFHRDL 152 (599)
Q Consensus 92 ~~~s~-------~--~~~---~iylV~E~~~g~L~~~i~~---~~~l--s-e~~i-~~i~~QLl~aL~yLHs~gIvHrDL 152 (599)
..... . +.- ..+++|+-+.+||.+++.. .... . ...+ ..+..|+++.+++||+.||+|+||
T Consensus 92 ~i~~~~~~~~~~~~~~~~~v~n~~~l~P~~~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~GlVHgdi 171 (288)
T PF14531_consen 92 RIPGKPPFFERGPGQSIYWVLNRFLLMPRAQGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYGLVHGDI 171 (288)
T ss_dssp EETTS-SEEEECETTEEEEEESEEEEEE--SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEEEST-
T ss_pred EEcCCCcceecCCCCccceeehhhhccchhhhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcceEeccc
Confidence 21110 0 111 3478999999999888653 2212 1 2233 345589999999999999999999
Q ss_pred CCCcEEeCCCCceeeeccCccccccCCCCCcccccccccCccccCccccccc------cCCCCcchhhHhHHHHHHHHHh
Q 007541 153 KPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSF------FSKYTPAIDIWSIGCIFAELLT 226 (599)
Q Consensus 153 KP~NILv~~~~~lKL~DFGlA~~~~~~~~~~~~~t~~~gt~~Y~APE~l~~~------~~~ys~~~DIWSlG~Il~eLlt 226 (599)
||+|+|++.+|.++|+||+.....+... .....+..|.+||+.... ...++.+.|.|+||+++|.|+|
T Consensus 172 ~~~nfll~~~G~v~Lg~F~~~~r~g~~~------~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC 245 (288)
T PF14531_consen 172 KPENFLLDQDGGVFLGDFSSLVRAGTRY------RCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWC 245 (288)
T ss_dssp SGGGEEE-TTS-EEE--GGGEEETTEEE------EGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHH
T ss_pred ceeeEEEcCCCCEEEcChHHHeecCcee------eccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHH
Confidence 9999999999999999999887643211 113455779999976331 1357889999999999999999
Q ss_pred CCCCCCCCC
Q 007541 227 GKPLFPGKN 235 (599)
Q Consensus 227 G~~pF~g~~ 235 (599)
|..||....
T Consensus 246 ~~lPf~~~~ 254 (288)
T PF14531_consen 246 GRLPFGLSS 254 (288)
T ss_dssp SS-STCCCG
T ss_pred ccCCCCCCC
Confidence 999997653
No 415
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.87 E-value=2.3e-22 Score=195.51 Aligned_cols=140 Identities=24% Similarity=0.256 Sum_probs=109.6
Q ss_pred EEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhh------------------------HHHHHHHHHHHHhcCCCC
Q 007541 28 EEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSD------------------------ATRILREIKLLRLLRHPD 83 (599)
Q Consensus 28 ~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~------------------------~~~i~rEi~iL~~l~Hpn 83 (599)
.+.||+|++|.||+|.+. +|+.||||+++........ .....+|+.+|..+.+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 80 (190)
T cd05147 2 NGCISTGKEANVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAG 80 (190)
T ss_pred CCccccccceEEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 467999999999999987 8999999999753211111 112345999999998887
Q ss_pred ccccceeecCCCcCCCccEEEEEecCCc-CHHHHHHhCCCCCHHHHHHHHHHHHhhhhhc-ccCceEeecCCCCcEEeCC
Q 007541 84 IVEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYI-HTANVFHRDLKPKNILANA 161 (599)
Q Consensus 84 Iv~l~~v~~~~s~~~~~~iylV~E~~~g-~L~~~i~~~~~lse~~i~~i~~QLl~aL~yL-Hs~gIvHrDLKP~NILv~~ 161 (599)
+.....+.. ...+|||||++| +|...+.....+++..+..++.||+.+|.+| |+.||+||||||+|||++
T Consensus 81 v~~p~~~~~-------~~~~iVmE~i~g~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~l~H~~giiHrDlkP~NIli~- 152 (190)
T cd05147 81 IPCPEPILL-------KSHVLVMEFIGDDGWAAPRLKDAPLSESKARELYLQVIQIMRILYQDCRLVHADLSEYNLLYH- 152 (190)
T ss_pred CCCCcEEEe-------cCCEEEEEEeCCCCCcchhhhcCCCCHHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEE-
Confidence 754333221 123899999996 5555544556799999999999999999999 799999999999999998
Q ss_pred CCceeeeccCccccc
Q 007541 162 DCKLKICDFGLARVA 176 (599)
Q Consensus 162 ~~~lKL~DFGlA~~~ 176 (599)
++.++|+|||+|...
T Consensus 153 ~~~v~LiDFG~a~~~ 167 (190)
T cd05147 153 DGKLYIIDVSQSVEH 167 (190)
T ss_pred CCcEEEEEccccccC
Confidence 578999999999754
No 416
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.86 E-value=7e-22 Score=195.97 Aligned_cols=175 Identities=13% Similarity=0.125 Sum_probs=134.3
Q ss_pred CCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhh-HHH------HHHHHHHHHhcCCCCccccceeecCC
Q 007541 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSD-ATR------ILREIKLLRLLRHPDIVEIKHILLPP 94 (599)
Q Consensus 22 ~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~-~~~------i~rEi~iL~~l~HpnIv~l~~v~~~~ 94 (599)
.++|.++++||.|+||.||++.+ ++..+|||.+......... ..+ +.+|+..+..+.|++|..+.+++...
T Consensus 30 ~~~y~~~~~l~~~~f~~v~l~~~--~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~ 107 (232)
T PRK10359 30 SYNIKTIKVFRNIDDTKVSLIDT--DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLA 107 (232)
T ss_pred hCceEEEEEecCCCceEEEEEec--CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeec
Confidence 78999999999999999999754 4778999999754433222 223 56899999999999999999887643
Q ss_pred CcC---CCccEEEEEecCCc-CHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeecc
Q 007541 95 SRR---EFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDF 170 (599)
Q Consensus 95 s~~---~~~~iylV~E~~~g-~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DF 170 (599)
... -....+|||||++| +|.++. .+++ ..+.+|+.+|..||..|++||||||.||+++.+| ++|+||
T Consensus 108 ~~~~~~~~~~~~lvmEyi~G~tL~~~~----~~~~----~~~~~i~~~l~~lH~~gi~H~Dikp~Nili~~~g-i~liDf 178 (232)
T PRK10359 108 ERKTLRYAHTYIMLIEYIEGVELNDMP----EISE----DVKAKIKASIESLHQHGMVSGDPHKGNFIVSKNG-LRIIDL 178 (232)
T ss_pred ccccccccCCeEEEEEEECCccHHHhh----hccH----HHHHHHHHHHHHHHHcCCccCCCChHHEEEeCCC-EEEEEC
Confidence 211 12468999999997 787763 2333 2466999999999999999999999999999999 999999
Q ss_pred CccccccCCCCCcccccccccCccccCcc-ccccccCCCCcchhhHhHHHHHHHHH
Q 007541 171 GLARVAFNDTPTAIFWTDYVATRWYRAPE-LCGSFFSKYTPAIDIWSIGCIFAELL 225 (599)
Q Consensus 171 GlA~~~~~~~~~~~~~t~~~gt~~Y~APE-~l~~~~~~ys~~~DIWSlG~Il~eLl 225 (599)
|.......... -+ +... ..|+.++||||||+++..+.
T Consensus 179 g~~~~~~e~~a----------------~d~~vle--r~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 179 SGKRCTAQRKA----------------KDRIDLE--RHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred CCcccccchhh----------------HHHHHHH--hHhcccccccceeEeehHHH
Confidence 98865421111 11 2222 45778999999999998765
No 417
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.86 E-value=9.4e-21 Score=190.46 Aligned_cols=226 Identities=21% Similarity=0.317 Sum_probs=176.9
Q ss_pred CCCCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcC-CCCccccceeecCCCcCC
Q 007541 20 GEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLR-HPDIVEIKHILLPPSRRE 98 (599)
Q Consensus 20 ~~~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~-HpnIv~l~~v~~~~s~~~ 98 (599)
-++-.|.|.++||+|+||+++.+.+.-+++.||||.=... +.+-.+.-|....+.|. .++|...+-+- .+
T Consensus 25 ~VG~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrk----S~APQLrdEYr~YKlL~g~~GIP~vYYFG-----qe 95 (449)
T KOG1165|consen 25 MVGPHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRK----SEAPQLRDEYRTYKLLGGTEGIPQVYYFG-----QE 95 (449)
T ss_pred EecccceeccccccCcceeeecccccccCceEEEEecccc----CCcchHHHHHHHHHHHcCCCCCCceeeec-----cc
Confidence 3567899999999999999999999999999999975432 33445556888888876 56776654322 34
Q ss_pred CccEEEEEecCCcCHHHHHHh-CCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCC-----CceeeeccCc
Q 007541 99 FKDIYVVFELMESDLHQVIKA-NDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANAD-----CKLKICDFGL 172 (599)
Q Consensus 99 ~~~iylV~E~~~g~L~~~i~~-~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~-----~~lKL~DFGl 172 (599)
+.+-.||+|+++.+|.+++.- ..+++...+.-++.|++.-++|+|++.+|.|||||+|+||..- ..|-|+|||+
T Consensus 96 G~~NiLVidLLGPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGm 175 (449)
T KOG1165|consen 96 GKYNILVIDLLGPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGM 175 (449)
T ss_pred cchhhhhhhhhCcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHhcceeecccCccceeecCCCCCCCceEEEEeccc
Confidence 456689999999988888863 4589999999999999999999999999999999999999754 4489999999
Q ss_pred cccccCCCCC-cc---cccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCC---ChhhHHHHHHH
Q 007541 173 ARVAFNDTPT-AI---FWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGK---NVVHQLDIMTD 245 (599)
Q Consensus 173 A~~~~~~~~~-~~---~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~---~~~~~l~~I~~ 245 (599)
|+.+...... .+ ......||..||+=...++ ...+...|+=|||-+|...|-|..||.|- +..+.+++|-+
T Consensus 176 AK~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlG--rEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK~kYeKIGe 253 (449)
T KOG1165|consen 176 AKEYRDPKTKQHIPYREHKSLSGTARYMSINTHLG--REQSRRDDLEALGHVFMYFLRGSLPWQGLKADTNKEKYEKIGE 253 (449)
T ss_pred hhhhcCccccccCccccccccccceeeeEeecccc--chhhhhhhHHHhhhhhhhhccCCCccccccCcchHHHHHHhcc
Confidence 9876432221 11 1245679999999877666 67888999999999999999999999885 45566666655
Q ss_pred hcCCCCHHHHH
Q 007541 246 LLGTPSPEAIA 256 (599)
Q Consensus 246 ~lG~p~~e~i~ 256 (599)
.--..+.+.++
T Consensus 254 ~Kr~T~i~~Lc 264 (449)
T KOG1165|consen 254 TKRSTPIEVLC 264 (449)
T ss_pred ccccCCHHHHH
Confidence 44444444443
No 418
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.86 E-value=2.7e-21 Score=187.86 Aligned_cols=141 Identities=23% Similarity=0.222 Sum_probs=111.8
Q ss_pred EEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChh-------------------h-----HHHHHHHHHHHHhcCCC
Q 007541 27 IEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVS-------------------D-----ATRILREIKLLRLLRHP 82 (599)
Q Consensus 27 i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~-------------------~-----~~~i~rEi~iL~~l~Hp 82 (599)
+.+.||+|++|.||+|.+. +|+.||||++........ . .....+|+..+..+.|+
T Consensus 1 ~~~~ig~G~~~~Vy~a~~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~ 79 (190)
T cd05145 1 INGCISTGKEANVYHARTG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEA 79 (190)
T ss_pred CCceeecCCCcEEEEEEcC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhC
Confidence 3578999999999999987 999999999875321100 0 12345799999999999
Q ss_pred CccccceeecCCCcCCCccEEEEEecCCcC-HHHHHHhCCCCCHHHHHHHHHHHHhhhhhccc-CceEeecCCCCcEEeC
Q 007541 83 DIVEIKHILLPPSRREFKDIYVVFELMESD-LHQVIKANDDLTPEHYQFFLYQLLRGLKYIHT-ANVFHRDLKPKNILAN 160 (599)
Q Consensus 83 nIv~l~~v~~~~s~~~~~~iylV~E~~~g~-L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs-~gIvHrDLKP~NILv~ 160 (599)
++.....+... ..||||||++|. +.........+++..+..++.||+.+|.+||+ .||+||||||+|||++
T Consensus 80 ~i~~p~~~~~~-------~~~lVmE~~~g~~~~~~~l~~~~~~~~~~~~i~~~l~~~l~~lH~~~givHrDlkP~NIll~ 152 (190)
T cd05145 80 GVPVPEPILLK-------KNVLVMEFIGDDGSPAPRLKDVPLEEEEAEELYEQVVEQMRRLYQEAGLVHGDLSEYNILYH 152 (190)
T ss_pred CCCCceEEEec-------CCEEEEEEecCCCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCChhhEEEE
Confidence 88655544321 238999999963 44333344578899999999999999999999 9999999999999999
Q ss_pred CCCceeeeccCccccc
Q 007541 161 ADCKLKICDFGLARVA 176 (599)
Q Consensus 161 ~~~~lKL~DFGlA~~~ 176 (599)
++.++|+|||+|...
T Consensus 153 -~~~~~liDFG~a~~~ 167 (190)
T cd05145 153 -DGKPYIIDVSQAVEL 167 (190)
T ss_pred -CCCEEEEEcccceec
Confidence 899999999999764
No 419
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.84 E-value=7.6e-21 Score=194.77 Aligned_cols=211 Identities=30% Similarity=0.398 Sum_probs=148.1
Q ss_pred CceEEEEEEeecCceEEEEEEECCCC-----------------------------------cEEEEEEecCcccChhhHH
Q 007541 23 SRYKIEEVIGKGSYGVVCSAYDTRTG-----------------------------------EKVAIKKINDIFEHVSDAT 67 (599)
Q Consensus 23 ~rY~i~~~LG~G~~g~V~~a~d~~tg-----------------------------------~~vAIK~i~~~~~~~~~~~ 67 (599)
+.|+|.+.||+|....||.|+-...| -+.|||.+-+ +++.+...
T Consensus 157 ddyeiG~~igkGC~AaVY~A~~~~dg~~le~~~~t~~~pgf~p~ts~p~e~~q~~~p~~~aFPLAiKmMfN-~~~~s~~~ 235 (598)
T KOG4158|consen 157 DDYEIGEFIGKGCNAAVYSARLANDGSDLESSGNTHYGPGFNPVTSIPAEIPQVSKPAQKAFPLAIKMMFN-FEHDSGDA 235 (598)
T ss_pred hhhcccchhhccchhhhhhhhcCCCcccccccCCCCcCCCcCCCcCCcccCCcccCccccccchHHHHhcc-cccCCchH
Confidence 67999999999999999999754311 1356665532 23333333
Q ss_pred HHHH----HHH------HH--------H-------hc-CCCCccccceeecCCC----------------------cCCC
Q 007541 68 RILR----EIK------LL--------R-------LL-RHPDIVEIKHILLPPS----------------------RREF 99 (599)
Q Consensus 68 ~i~r----Ei~------iL--------~-------~l-~HpnIv~l~~v~~~~s----------------------~~~~ 99 (599)
.|++ |+. .+ + +| +|||||++...|.+.- ....
T Consensus 236 ~iL~sM~~ElvPa~~~a~~~e~~~~t~R~l~nqtvhLa~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~ 315 (598)
T KOG4158|consen 236 HILKSMGNELVPAPNAAKLLEGQMGTFRPLPNQTVHLAKHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEP 315 (598)
T ss_pred HHHHHhhhhccCcchhhhhcccccceeeeCCCCCcccCCCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCC
Confidence 3332 211 11 1 22 5999999988884321 1334
Q ss_pred ccEEEEEecCCcCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeC--CCC--ceeeeccCcccc
Q 007541 100 KDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILAN--ADC--KLKICDFGLARV 175 (599)
Q Consensus 100 ~~iylV~E~~~g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~--~~~--~lKL~DFGlA~~ 175 (599)
..+|+||..+..+|++++-.+ ..+....+-++.|+++|+.|||.+||.|||||.+|||+. +|+ .+.|+|||.+-.
T Consensus 316 ~tlylvMkrY~~tLr~yl~~~-~~s~r~~~~~laQlLEav~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLA 394 (598)
T KOG4158|consen 316 KTLYLVMKRYRQTLREYLWTR-HRSYRTGRVILAQLLEAVTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLA 394 (598)
T ss_pred ceEEEehhcchhhHHHHHhcC-CCchHHHHHHHHHHHHHHHHHHHccchhhcccccceEEEecCCCCcEEEEcccceeee
Confidence 579999999999999999776 578888899999999999999999999999999999974 333 389999998854
Q ss_pred ccCCCCC---cccccccccCccccCccccccccCC----CCcchhhHhHHHHHHHHHhCCCCCCCCC
Q 007541 176 AFNDTPT---AIFWTDYVATRWYRAPELCGSFFSK----YTPAIDIWSIGCIFAELLTGKPLFPGKN 235 (599)
Q Consensus 176 ~~~~~~~---~~~~t~~~gt~~Y~APE~l~~~~~~----ys~~~DIWSlG~Il~eLltG~~pF~g~~ 235 (599)
..+..-. .....+.-|.-..||||+....... --.++|.|++|-+.||+++...||.+..
T Consensus 395 d~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rG 461 (598)
T KOG4158|consen 395 DDNHGLQLPYESDEVDLGGNAKLMAPEIATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRG 461 (598)
T ss_pred ccccccccccccccccCCCcceecchhhhhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccc
Confidence 3221111 1112234567778999986432111 1136899999999999999999997643
No 420
>PRK10345 hypothetical protein; Provisional
Probab=99.81 E-value=1.2e-19 Score=178.73 Aligned_cols=136 Identities=20% Similarity=0.235 Sum_probs=107.1
Q ss_pred EEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhc-----CCCCccccceeecCCCcCCCccE
Q 007541 28 EEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLL-----RHPDIVEIKHILLPPSRREFKDI 102 (599)
Q Consensus 28 ~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l-----~HpnIv~l~~v~~~~s~~~~~~i 102 (599)
.+.||+|+||.||. +..++.. +||++.... ......+.+|+.+++.+ .||||+++++++.+.. +...+
T Consensus 7 ~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~--~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~--g~g~v 79 (210)
T PRK10345 7 QSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRG--DGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDC--GTGYV 79 (210)
T ss_pred cceecCCCceEEEE--CCCCcCe-EEEEEeccc--cchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCC--CCeEE
Confidence 46899999999995 7777777 699886421 22456788999999999 5799999999996642 12344
Q ss_pred E-EEEecCC---cCHHHHHHhCCCCCHHHHHHHHHHHHhhh-hhcccCceEeecCCCCcEEeCCC----CceeeeccCcc
Q 007541 103 Y-VVFELME---SDLHQVIKANDDLTPEHYQFFLYQLLRGL-KYIHTANVFHRDLKPKNILANAD----CKLKICDFGLA 173 (599)
Q Consensus 103 y-lV~E~~~---g~L~~~i~~~~~lse~~i~~i~~QLl~aL-~yLHs~gIvHrDLKP~NILv~~~----~~lKL~DFGlA 173 (599)
+ +|+||++ ++|.++++.. .+++. ..++.|++.++ +|||+++|+||||||+|||++.+ +.++|+||+.+
T Consensus 80 ~~~I~e~~G~~~~tL~~~l~~~-~~~e~--~~~~~~~L~~l~~yLh~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg~G~ 156 (210)
T PRK10345 80 YDVIADFDGKPSITLTEFAEQC-RYEED--VAQLRQLLKKLKRYLLDNRIVTMELKPQNILCQRISESEVIPVVCDNIGE 156 (210)
T ss_pred EEEEecCCCCcchhHHHHHHcc-cccHh--HHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEeccCCCCCcEEEEECCCC
Confidence 4 7899955 5999999764 56666 35688888887 99999999999999999999753 47999995544
No 421
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.81 E-value=1.1e-19 Score=177.02 Aligned_cols=189 Identities=17% Similarity=0.076 Sum_probs=137.1
Q ss_pred EEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccCh--hhHHHHHHHHHHHHhcC-CCCccccceeecCCCcCCCccE
Q 007541 26 KIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHV--SDATRILREIKLLRLLR-HPDIVEIKHILLPPSRREFKDI 102 (599)
Q Consensus 26 ~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~--~~~~~i~rEi~iL~~l~-HpnIv~l~~v~~~~s~~~~~~i 102 (599)
.+...|++|+||+|+.+.. .+.+++.+.+....... .....+.+|+.+|+.|. |++|.+++++. ..
T Consensus 5 ~~~~~l~~~~f~~v~~~~~--~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~~---------~~ 73 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRG--GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHWD---------GR 73 (218)
T ss_pred ccceeecCCCcceEEEeec--CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEEc---------CE
Confidence 3567899999999998754 78889888776433211 12335789999999996 58899888752 46
Q ss_pred EEEEecCCc-CHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecC-CCCcEEeCCCCceeeeccCccccccCCC
Q 007541 103 YVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDL-KPKNILANADCKLKICDFGLARVAFNDT 180 (599)
Q Consensus 103 ylV~E~~~g-~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDL-KP~NILv~~~~~lKL~DFGlA~~~~~~~ 180 (599)
|+||||+.| +|.+.+.. . ...++.|++.+|++||++||+|||| ||+|||++.+|.++|+|||+|.......
T Consensus 74 ~lvmeyI~G~~L~~~~~~------~-~~~~~~qi~~~L~~lH~~GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~ 146 (218)
T PRK12274 74 HLDRSYLAGAAMYQRPPR------G-DLAYFRAARRLLQQLHRCGVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRA 146 (218)
T ss_pred EEEEeeecCccHHhhhhh------h-hHHHHHHHHHHHHHHHHCcCccCCCCCcceEEEcCCCCEEEEECCCceecCCcc
Confidence 999999997 66554321 1 1357889999999999999999999 7999999999999999999998543222
Q ss_pred CC----c--------ccccccccCccccCccccccccCCCC-cchhhHhHHHHHHHHHhCCCCCCCCC
Q 007541 181 PT----A--------IFWTDYVATRWYRAPELCGSFFSKYT-PAIDIWSIGCIFAELLTGKPLFPGKN 235 (599)
Q Consensus 181 ~~----~--------~~~t~~~gt~~Y~APE~l~~~~~~ys-~~~DIWSlG~Il~eLltG~~pF~g~~ 235 (599)
.. . ..+ ...++.|++|+...-. ...+ ...+..+.|+-+|.++||+.++-+++
T Consensus 147 ~~~r~L~~rDl~~llk~~--~~y~~~~l~~~~~~~l-~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~~ 211 (218)
T PRK12274 147 RWMRLLAREDLRHLLKHK--RMYCPAALTPVERRVL-KRTSWIRELWFATGKPVYRFVTRRVLHWEDN 211 (218)
T ss_pred hHHHHHHHHHHHHHHHHH--HhcCCCCCCHHHHhhh-ccchhHHHHHHHhcchHHHHHhccCCccccC
Confidence 10 0 001 1245677888753221 1223 45677889999999999998875543
No 422
>smart00090 RIO RIO-like kinase.
Probab=99.79 E-value=2.5e-19 Score=180.09 Aligned_cols=148 Identities=19% Similarity=0.147 Sum_probs=114.7
Q ss_pred CCCCceEEEEEEeecCceEEEEEE-ECCCCcEEEEEEecCcccChh----------------------hHHHHHHHHHHH
Q 007541 20 GEGSRYKIEEVIGKGSYGVVCSAY-DTRTGEKVAIKKINDIFEHVS----------------------DATRILREIKLL 76 (599)
Q Consensus 20 ~~~~rY~i~~~LG~G~~g~V~~a~-d~~tg~~vAIK~i~~~~~~~~----------------------~~~~i~rEi~iL 76 (599)
-.+.-|.+.+.||+|++|.||+|. +..+|+.||||++........ ....+.+|+.++
T Consensus 25 ~~~~~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L 104 (237)
T smart00090 25 NRGILSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNL 104 (237)
T ss_pred hcCchHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHH
Confidence 345568999999999999999999 778999999999874321000 112356899999
Q ss_pred HhcCCCCccccceeecCCCcCCCccEEEEEecCCc-CHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCc-eEeecCCC
Q 007541 77 RLLRHPDIVEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTAN-VFHRDLKP 154 (599)
Q Consensus 77 ~~l~HpnIv~l~~v~~~~s~~~~~~iylV~E~~~g-~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~g-IvHrDLKP 154 (599)
+.+.+. .+.+..++.. ...||||||++| +|.........+....+..++.||+.+|.+||+.| |+||||||
T Consensus 105 ~~L~~~-~i~~p~~~~~------~~~~lV~E~~~g~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~g~iiH~Dikp 177 (237)
T smart00090 105 QRLYEA-GVPVPKPIAW------RRNVLVMEFIGGDGLPAPRLKDVEPEEEEEFELYDDILEEMRKLYKEGELVHGDLSE 177 (237)
T ss_pred HHHHhc-CCCCCeeeEe------cCceEEEEEecCCcccccccccCCcchHHHHHHHHHHHHHHHHHHhcCCEEeCCCCh
Confidence 999753 3333333321 124899999997 56555444456777778899999999999999999 99999999
Q ss_pred CcEEeCCCCceeeeccCcccc
Q 007541 155 KNILANADCKLKICDFGLARV 175 (599)
Q Consensus 155 ~NILv~~~~~lKL~DFGlA~~ 175 (599)
+|||++ ++.++|+|||.|..
T Consensus 178 ~NIli~-~~~i~LiDFg~a~~ 197 (237)
T smart00090 178 YNILVH-DGKVVIIDVSQSVE 197 (237)
T ss_pred hhEEEE-CCCEEEEEChhhhc
Confidence 999999 88999999999864
No 423
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.79 E-value=6.1e-20 Score=195.29 Aligned_cols=200 Identities=25% Similarity=0.351 Sum_probs=141.1
Q ss_pred CCCCceEEEEEEeecCceEEEEEEECCC---CcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccce-------
Q 007541 20 GEGSRYKIEEVIGKGSYGVVCSAYDTRT---GEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKH------- 89 (599)
Q Consensus 20 ~~~~rY~i~~~LG~G~~g~V~~a~d~~t---g~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~------- 89 (599)
.....+.+.+.++..+++.+....-... .+.++-|.... .+........+++..+....|-+..-+.+
T Consensus 241 ~~~~s~~~~k~~~~~~~~~~~~~q~~~~~s~~E~~~s~~~~~--d~~~~~~~~~r~~~~l~~~~~~~~s~~~d~~~s~~~ 318 (516)
T KOG1033|consen 241 EESGSSSISKSSERVSSGIVFEKQGKNNSSLREWLKSKRADV--DSLCACKYTFRQLGVLVDSSHSNRSILEDLRPSLFE 318 (516)
T ss_pred cccccccccccccccccCCchhhhhcccchhhhhccchhhhc--cchhhhhhhhhhhhheeccccCCcccccCCCCchhh
Confidence 3445566666677777776665543333 33333332221 12123445667777776666544433333
Q ss_pred eecCCCcCCCccEEEEEecCC-cCHHHHHHhCC---CCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCce
Q 007541 90 ILLPPSRREFKDIYVVFELME-SDLHQVIKAND---DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKL 165 (599)
Q Consensus 90 v~~~~s~~~~~~iylV~E~~~-g~L~~~i~~~~---~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~l 165 (599)
.+.........++||.|++|. .+|.++|.... ..+...++.++.|+..+++| +|.+|||+||.||+...++.+
T Consensus 319 ~~~~~~v~~~~~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~~ihrdlkp~nif~~~d~q~ 395 (516)
T KOG1033|consen 319 SSKRNKVGKKVYLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KGLIHRDLKPSNIFFSDDDQL 395 (516)
T ss_pred hccccccccccchhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---ccchhhhccccccccccchhh
Confidence 111111111236899999999 69999997543 46778899999999999999 999999999999999999999
Q ss_pred eeeccCccccccCCC---CCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHh
Q 007541 166 KICDFGLARVAFNDT---PTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT 226 (599)
Q Consensus 166 KL~DFGlA~~~~~~~---~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLlt 226 (599)
||.|||+........ +....++.-+||.||++||.|.+ ..|+.++||||||+|||||+.
T Consensus 396 kIgDFgl~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g--~~y~~kvdIyaLGlil~EL~~ 457 (516)
T KOG1033|consen 396 KIGDFGLVTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRG--QQYSEKVDIYALGLILAELLI 457 (516)
T ss_pred hhhhhhheeecccCCcccchhhhhhhcccccccCCHHHHhh--hhhhhhcchhhHHHHHHHHHH
Confidence 999999987654332 11223567799999999999988 789999999999999999986
No 424
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.78 E-value=3.6e-19 Score=204.62 Aligned_cols=193 Identities=25% Similarity=0.342 Sum_probs=151.6
Q ss_pred CCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcC---CCCccccceeecCCCcCC
Q 007541 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLR---HPDIVEIKHILLPPSRRE 98 (599)
Q Consensus 22 ~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~---HpnIv~l~~v~~~~s~~~ 98 (599)
+.+|.|.+.||+|+||.||.|.+.. |+.||||+=+.... ..++-=..++.+|+ -+.|+.+..++.-.
T Consensus 697 ~~~~~I~~e~G~g~y~~vy~a~~~~-~~~~alK~e~P~~~-----WEfYI~~q~~~RLk~~~~~~~~~~~~a~~~~---- 766 (974)
T KOG1166|consen 697 GEKFCISKEIGEGSYGSVYVATHSN-GKLVALKVEKPPNP-----WEFYICLQVMERLKPQMLPSIMHISSAHVFQ---- 766 (974)
T ss_pred ceeEEEEeeeccccceEEEEeecCC-CcEEEEEeecCCCc-----eeeeehHHHHHhhchhhhcchHHHHHHHccC----
Confidence 6799999999999999999999877 99999998654222 22222223333333 24455554444322
Q ss_pred CccEEEEEecCC-cCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCC-------CCceeeecc
Q 007541 99 FKDIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANA-------DCKLKICDF 170 (599)
Q Consensus 99 ~~~iylV~E~~~-g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~-------~~~lKL~DF 170 (599)
+.-+||+||.+ |+|.+++..++.+++..+..|.+|+++.|++||..+|||+||||+|+|+.. +--|+|+||
T Consensus 767 -~~S~lv~ey~~~Gtlld~~N~~~~m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDf 845 (974)
T KOG1166|consen 767 -NASVLVSEYSPYGTLLDLINTNKVMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDNFLLRREICADSDSKGLYLIDF 845 (974)
T ss_pred -CcceeeeeccccccHHHhhccCCCCCchhhhHHHHHHHHHHHHHHhcceecccCCcceeEeecccCCCCcccceEEEec
Confidence 13489999999 899999998889999999999999999999999999999999999999753 234999999
Q ss_pred CccccccCCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCC
Q 007541 171 GLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGK 228 (599)
Q Consensus 171 GlA~~~~~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~ 228 (599)
|.|.-..- -+....++..++|-.+-.+|...+ ..|++.+|.|.|+-+++.||.|+
T Consensus 846 G~siDm~l-fp~~~~F~~~~~td~f~C~EM~~g--rpWtYq~DyfGlAa~~h~mLFG~ 900 (974)
T KOG1166|consen 846 GRSIDMKL-FPDGTKFKAVWHTDLFDCIEMREG--RPWTYQIDYFGLAATVHVMLFGK 900 (974)
T ss_pred ccceeeeE-cCCCcEEeeeeccccchhHHHhcC--CCCchhhhhHHHHHHHHHHHHHH
Confidence 99864321 122234566788889999999988 79999999999999999999997
No 425
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.77 E-value=3.8e-20 Score=208.19 Aligned_cols=265 Identities=26% Similarity=0.359 Sum_probs=207.2
Q ss_pred CCceEEEEEEeecCceEEEEEEECC-CCcEEEEEEecCcccChhhHHHHHHHHHHHHhcC-CCCccccceeecCCCcCCC
Q 007541 22 GSRYKIEEVIGKGSYGVVCSAYDTR-TGEKVAIKKINDIFEHVSDATRILREIKLLRLLR-HPDIVEIKHILLPPSRREF 99 (599)
Q Consensus 22 ~~rY~i~~~LG~G~~g~V~~a~d~~-tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~-HpnIv~l~~v~~~~s~~~~ 99 (599)
...|.+.+.||+|+|+.|-++.... +...+|.|.+...........++..|..+-+.+. |.|++.+++.... .
T Consensus 19 ~~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~-----~ 93 (601)
T KOG0590|consen 19 NSQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSS-----P 93 (601)
T ss_pred cccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCC-----C
Confidence 6678999999999999999987643 4566888887754434445566777888888887 9999999988743 3
Q ss_pred ccEEEEEecCC-cCHHHHH-HhCC-CCCHHHHHHHHHHHHhhhhhcc-cCceEeecCCCCcEEeCCCC-ceeeeccCccc
Q 007541 100 KDIYVVFELME-SDLHQVI-KAND-DLTPEHYQFFLYQLLRGLKYIH-TANVFHRDLKPKNILANADC-KLKICDFGLAR 174 (599)
Q Consensus 100 ~~iylV~E~~~-g~L~~~i-~~~~-~lse~~i~~i~~QLl~aL~yLH-s~gIvHrDLKP~NILv~~~~-~lKL~DFGlA~ 174 (599)
...+++++|.. ++++..+ .... ..+...+..++.|+..+|.|+| ..++.||||||+|.+++..+ .+|+.|||+|.
T Consensus 94 ~~~~~~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l~~s~~~l~~~df~~At 173 (601)
T KOG0590|consen 94 RSYLLSLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLLDESGSALKIADFGLAT 173 (601)
T ss_pred cccccccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCcccccccCCCCCccchhccCCCcccCCCchhhc
Confidence 46889999977 5899888 5554 6888999999999999999999 99999999999999999999 99999999998
Q ss_pred cccCCCCCccccccccc-CccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHH
Q 007541 175 VAFNDTPTAIFWTDYVA-TRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPE 253 (599)
Q Consensus 175 ~~~~~~~~~~~~t~~~g-t~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e 253 (599)
...............+| ++.|.|||...+. ....+..|+||+|+++..+++|..++......+.
T Consensus 174 ~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~-~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~-------------- 238 (601)
T KOG0590|consen 174 AYRNKNGAERSLKDRCGSSPPYGAPEHLSGK-AYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDG-------------- 238 (601)
T ss_pred cccccCCcceeeecccCCCCCCCCcccccch-hhcCCCcccccccccccccccCCCCccccccccc--------------
Confidence 77652222333456788 9999999998662 3557889999999999999999988864432210
Q ss_pred HHHHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHH
Q 007541 254 AIARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALR 333 (599)
Q Consensus 254 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~d 333 (599)
+|..-+ ......-...+...+..+.+
T Consensus 239 -----------------------------------------------------~~~~~~-~~~~~~~~~~~~~~~~~~~~ 264 (601)
T KOG0590|consen 239 -----------------------------------------------------RYSSWK-SNKGRFTQLPWNSISDQAHD 264 (601)
T ss_pred -----------------------------------------------------cceeec-ccccccccCccccCChhhhh
Confidence 000000 00001112234567888999
Q ss_pred HHHHhcccCCCCCCCHHHHhcCccccC
Q 007541 334 LLERMLAFEPKDRPTAEEALADPYFKG 360 (599)
Q Consensus 334 LL~~mL~~DP~~RpTa~e~L~HP~f~~ 360 (599)
++.++|..+|..|.+.+++-.+||+..
T Consensus 265 ~l~k~l~~~~~~r~s~~~~~~d~~~~~ 291 (601)
T KOG0590|consen 265 LLHKILKENPSNRLSIEELKLDNWLSS 291 (601)
T ss_pred cccccccCCchhccccccccccccccc
Confidence 999999999999999999999999988
No 426
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.76 E-value=3.2e-18 Score=168.14 Aligned_cols=135 Identities=22% Similarity=0.285 Sum_probs=110.3
Q ss_pred EEEeecCceEEEEEEECCCCcEEEEEEecCcccCh------hhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccE
Q 007541 29 EVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHV------SDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDI 102 (599)
Q Consensus 29 ~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~------~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~i 102 (599)
+.||+|++|.||+|.+ .|..|+||+........ ....++.+|+.++..+.|++|.....++... ...
T Consensus 2 ~~l~~G~~~~vy~~~~--~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~-----~~~ 74 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF--LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDP-----ENF 74 (211)
T ss_pred cccccCceEEEEEEee--CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeC-----CCC
Confidence 5799999999999976 78889999865322111 1234677899999999999987776665332 357
Q ss_pred EEEEecCCc-CHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCcccc
Q 007541 103 YVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARV 175 (599)
Q Consensus 103 ylV~E~~~g-~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~ 175 (599)
++||||++| +|.+++..... ....++.+|+.+|.+||+.|++|+|++|.|||++ ++.++|+|||+++.
T Consensus 75 ~lv~e~~~G~~L~~~~~~~~~----~~~~i~~~i~~~l~~lH~~~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 75 IIVMEYIEGEPLKDLINSNGM----EELELSREIGRLVGKLHSAGIIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred EEEEEEeCCcCHHHHHHhccH----HHHHHHHHHHHHHHHHHhCCcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 899999985 89988865432 7888999999999999999999999999999999 88999999999875
No 427
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.72 E-value=1.6e-17 Score=162.21 Aligned_cols=139 Identities=22% Similarity=0.205 Sum_probs=105.6
Q ss_pred ceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccCh--------------------hhHHHHHHHHHHHHhcCCCC
Q 007541 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHV--------------------SDATRILREIKLLRLLRHPD 83 (599)
Q Consensus 24 rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~--------------------~~~~~i~rEi~iL~~l~Hpn 83 (599)
.|.+.+.||+|++|.||+|.+. +|+.||||++....... .......+|+.++..+.|.+
T Consensus 16 ~~~~~~~i~~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 94 (198)
T cd05144 16 VESLGNQIGVGKESDVYLALDP-DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEG 94 (198)
T ss_pred hhhcCCccccCcceEEEEEEcC-CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcC
Confidence 4888999999999999999874 89999999875321100 01123567999999888775
Q ss_pred ccccceeecCCCcCCCccEEEEEecCCc-CHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCC
Q 007541 84 IVEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANAD 162 (599)
Q Consensus 84 Iv~l~~v~~~~s~~~~~~iylV~E~~~g-~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~ 162 (599)
+. +...+. ....++||||++| +|..+.. ......++.+|+.++.++|+.||+||||||.|||++.+
T Consensus 95 i~-v~~~~~------~~~~~lv~e~~~g~~L~~~~~------~~~~~~~~~~i~~~l~~lh~~gi~H~Dl~p~Nill~~~ 161 (198)
T cd05144 95 FP-VPKPID------WNRHAVVMEYIDGVELYRVRV------LEDPEEVLDEILEEIVKAYKHGIIHGDLSEFNILVDDD 161 (198)
T ss_pred CC-CCceee------cCCceEEEEEeCCcchhhccc------cccHHHHHHHHHHHHHHHHHCCCCcCCCCcccEEEcCC
Confidence 31 222221 1235899999996 6655432 14567789999999999999999999999999999999
Q ss_pred CceeeeccCccccc
Q 007541 163 CKLKICDFGLARVA 176 (599)
Q Consensus 163 ~~lKL~DFGlA~~~ 176 (599)
+.++|+|||.+...
T Consensus 162 ~~~~liDfg~~~~~ 175 (198)
T cd05144 162 EKIYIIDWPQMVST 175 (198)
T ss_pred CcEEEEECCccccC
Confidence 99999999999654
No 428
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.71 E-value=3.1e-17 Score=177.57 Aligned_cols=305 Identities=23% Similarity=0.278 Sum_probs=193.8
Q ss_pred HHhcCCCCccccceeecCCCcCCCccEEEEEecCC-cCHHHHHHhC-CCCCHHHHHHHHHHHHhhhhhcccCce-EeecC
Q 007541 76 LRLLRHPDIVEIKHILLPPSRREFKDIYVVFELME-SDLHQVIKAN-DDLTPEHYQFFLYQLLRGLKYIHTANV-FHRDL 152 (599)
Q Consensus 76 L~~l~HpnIv~l~~v~~~~s~~~~~~iylV~E~~~-g~L~~~i~~~-~~lse~~i~~i~~QLl~aL~yLHs~gI-vHrDL 152 (599)
|+.+.|.|+.+++++..+. ..+++|.+||. |+|.+.+... -.++..-.-.+++.|+.||.|||+.-| +|+.|
T Consensus 1 l~~l~h~n~~~f~g~~~~~-----~~~~~i~~~c~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l 75 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDG-----PEMIVIWEYCSRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLHNSPIGYHGAL 75 (484)
T ss_pred CcccchhhhhhheeeEecC-----CceEEEEeeecCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHhcCcceeeeee
Confidence 4678899999999999765 47999999999 8999999874 477888888999999999999999876 99999
Q ss_pred CCCcEEeCCCCceeeeccCccccccCCCCCcccccccccCccccCccccccc--cC---CCCcchhhHhHHHHHHHHHhC
Q 007541 153 KPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSF--FS---KYTPAIDIWSIGCIFAELLTG 227 (599)
Q Consensus 153 KP~NILv~~~~~lKL~DFGlA~~~~~~~~~~~~~t~~~gt~~Y~APE~l~~~--~~---~ys~~~DIWSlG~Il~eLltG 227 (599)
+..|.+++....+||+|||+...... ...............|.|||++... .. ..+.+.||||+|+|++|+++.
T Consensus 76 ~s~nClvd~~w~lklt~~Gl~~~~~~-~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r 154 (484)
T KOG1023|consen 76 KSSNCLVDSRWVLKLTDFGLNSLLEE-TAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFR 154 (484)
T ss_pred ccccceeeeeEEEEechhhhcccccc-cccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhc
Confidence 99999999999999999999977532 1111111222244569999998652 11 146679999999999999999
Q ss_pred CCCCCCCChhh----HHHHHHHhcCCCCHHHHHHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccH
Q 007541 228 KPLFPGKNVVH----QLDIMTDLLGTPSPEAIARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNE 303 (599)
Q Consensus 228 ~~pF~g~~~~~----~l~~I~~~lG~p~~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (599)
..||....... .+..+.+ .|.
T Consensus 155 ~~~~~~~~~~~~~~eii~~~~~-~~~------------------------------------------------------ 179 (484)
T KOG1023|consen 155 SGPFDLRNLVEDPDEIILRVKK-GGS------------------------------------------------------ 179 (484)
T ss_pred cCccccccccCChHHHHHHHHh-cCC------------------------------------------------------
Confidence 99997643211 1111111 000
Q ss_pred HHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccccCcccCCCCCCCCCCCcchhhHhhh
Q 007541 304 KARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKVEREPSAQPVTKMEFEFERR 383 (599)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL~~DP~~RpTa~e~L~HP~f~~~~~~~~~p~~~~~~~~~~~~e~~ 383 (599)
....+.-.......+....++.+|+.-+|.+||+++++-.. +..+..... ... .-++..+..-
T Consensus 180 -----------~~~rP~i~~~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~--~~~~~~~~~--~~~--nl~D~m~~~l 242 (484)
T KOG1023|consen 180 -----------NPFRPSIELLNELPPELLLLVARCWEEIPEKRPSIEQIRSK--LLTINKGGS--SKG--NLMDSLFRML 242 (484)
T ss_pred -----------CCcCcchhhhhhcchHHHHHHHHhcccChhhCccHHHHHhh--hhhhccccc--ccc--hhHHHHHHHH
Confidence 00011001111344578999999999999999999988542 111111000 000 0111111111
Q ss_pred cCCHHHHHHHHHHHHHhhChhhHHhhhcCCCCCCCCCCchhhHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCCcccccCC
Q 007541 384 RITKEDVRELIYREILEYHPQMLKEFLEGSEPTGFMYPSAVDHFKKQFAYLEEHYGKGTTVAPPERQHASLPRPCVLYSD 463 (599)
Q Consensus 384 ~~~~e~~~~~i~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (599)
....+..++++ .+...++..+.........-++|..|. +....|..+.|..-.++.+-.+.||.++
T Consensus 243 e~Y~~nLe~~v----~eRt~~l~~e~~k~d~LL~~mLP~~VA----------~~lk~G~~v~pe~~~~vti~fsDiv~fT 308 (484)
T KOG1023|consen 243 ESYADNLEKLV----DERTAELEEEKKKTDTLLGQMLPKSVA----------ESLKLGKTVDPESFDSVTIYFSDIVGFT 308 (484)
T ss_pred HHHHhhhHHHH----HHHHHHHHHHHHHHHHHHHHhcCHHHh----------hHhhcCCcCCccccCceeeeeHHHHHHH
Confidence 11111111111 111111111111111112224554444 6778899999999999999999988887
Q ss_pred CCCCCcccc
Q 007541 464 KTVQNSAAV 472 (599)
Q Consensus 464 ~~~~~~~~~ 472 (599)
+...++.|.
T Consensus 309 ~l~~~~~P~ 317 (484)
T KOG1023|consen 309 VLSSNSTPI 317 (484)
T ss_pred HHHhcCCCc
Confidence 776666554
No 429
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.70 E-value=5.8e-17 Score=157.83 Aligned_cols=131 Identities=28% Similarity=0.390 Sum_probs=102.6
Q ss_pred EEeecCceEEEEEEECCCCcEEEEEEecCc-ccCh-----hhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEE
Q 007541 30 VIGKGSYGVVCSAYDTRTGEKVAIKKINDI-FEHV-----SDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIY 103 (599)
Q Consensus 30 ~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~-~~~~-----~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~iy 103 (599)
.||+|++|+||++. .+|..|++|+.... .... ....++.+|+.+++.++|+++....-++... ...+
T Consensus 1 ~ig~G~~~~vy~~~--~~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~-----~~~~ 73 (199)
T TIGR03724 1 LIAKGAEAIIYLGD--FLGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDP-----DNKT 73 (199)
T ss_pred CCCCCceEEEEEee--cCCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEC-----CCCE
Confidence 48999999999997 46789999986432 1211 1235677899999999987755444333222 2468
Q ss_pred EEEecCCc-CHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCcccc
Q 007541 104 VVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARV 175 (599)
Q Consensus 104 lV~E~~~g-~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~ 175 (599)
+||||++| +|.+++..... .++.||+.+|.+||+.|++|+|++|.|||++ ++.++|+|||+++.
T Consensus 74 lv~e~~~g~~l~~~~~~~~~-------~~~~~i~~~l~~lH~~gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~ 138 (199)
T TIGR03724 74 IVMEYIEGKPLKDVIEEGND-------ELLREIGRLVGKLHKAGIVHGDLTTSNIIVR-DDKLYLIDFGLGKY 138 (199)
T ss_pred EEEEEECCccHHHHHhhcHH-------HHHHHHHHHHHHHHHCCeecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence 99999985 88887755321 7899999999999999999999999999999 89999999999865
No 430
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.68 E-value=1.2e-16 Score=179.19 Aligned_cols=139 Identities=23% Similarity=0.321 Sum_probs=108.6
Q ss_pred CCceEEEEEEeecCceEEEEEEECCCCcEEEEEEe-cCcccC-----hhhHHHHHHHHHHHHhcCCCCccccceeecCCC
Q 007541 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKI-NDIFEH-----VSDATRILREIKLLRLLRHPDIVEIKHILLPPS 95 (599)
Q Consensus 22 ~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i-~~~~~~-----~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s 95 (599)
...|...+.||+|+||+||++... +..+++|+. .+.... .....++.+|+.+|+.++|++++....+....
T Consensus 332 ~~~~~~~~~iG~G~~g~Vy~~~~~--~~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~- 408 (535)
T PRK09605 332 KRRKIPDHLIGKGAEADIKKGEYL--GRDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDP- 408 (535)
T ss_pred ccccCccceeccCCcEEEEEEeec--CccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeC-
Confidence 445567899999999999999764 344555543 221111 12245688999999999999998876655332
Q ss_pred cCCCccEEEEEecCCc-CHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccc
Q 007541 96 RREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLAR 174 (599)
Q Consensus 96 ~~~~~~iylV~E~~~g-~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~ 174 (599)
...++||||+++ +|.+++. ....++.||+++|.+||+.||+||||||+|||+ .++.++|+|||+++
T Consensus 409 ----~~~~lv~E~~~g~~L~~~l~--------~~~~~~~~i~~~L~~lH~~giiHrDlkp~NILl-~~~~~~liDFGla~ 475 (535)
T PRK09605 409 ----EEKTIVMEYIGGKDLKDVLE--------GNPELVRKVGEIVAKLHKAGIVHGDLTTSNFIV-RDDRLYLIDFGLGK 475 (535)
T ss_pred ----CCCEEEEEecCCCcHHHHHH--------HHHHHHHHHHHHHHHHHhCCCccCCCChHHEEE-ECCcEEEEeCcccc
Confidence 246899999985 8988875 357789999999999999999999999999999 67899999999997
Q ss_pred cc
Q 007541 175 VA 176 (599)
Q Consensus 175 ~~ 176 (599)
..
T Consensus 476 ~~ 477 (535)
T PRK09605 476 YS 477 (535)
T ss_pred cC
Confidence 64
No 431
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.68 E-value=9.2e-17 Score=154.71 Aligned_cols=136 Identities=25% Similarity=0.261 Sum_probs=96.5
Q ss_pred EEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHH----------------------HHHHHHHHHhcCCCC--
Q 007541 28 EEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATR----------------------ILREIKLLRLLRHPD-- 83 (599)
Q Consensus 28 ~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~----------------------i~rEi~iL~~l~Hpn-- 83 (599)
.+.||+|+||+||+|.+. +|+.||||++............ ...|...+..+.+..
T Consensus 2 ~~~lg~G~~g~Vy~a~~~-~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~ 80 (187)
T cd05119 2 GGPIGTGKEADVYLALDG-DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVP 80 (187)
T ss_pred CcccccccceeEEEEECC-CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCC
Confidence 467999999999999986 8999999998643221111111 134555565554332
Q ss_pred ccccceeecCCCcCCCccEEEEEecCCc-CHH-HHHHhCCCCCHHHHHHHHHHHHhhhhhccc-CceEeecCCCCcEEeC
Q 007541 84 IVEIKHILLPPSRREFKDIYVVFELMES-DLH-QVIKANDDLTPEHYQFFLYQLLRGLKYIHT-ANVFHRDLKPKNILAN 160 (599)
Q Consensus 84 Iv~l~~v~~~~s~~~~~~iylV~E~~~g-~L~-~~i~~~~~lse~~i~~i~~QLl~aL~yLHs-~gIvHrDLKP~NILv~ 160 (599)
+.+.+.+ ...++||||+++ .+. ..+.... .. ..++.++.+++.++.++|+ .||+||||||+|||++
T Consensus 81 ~~~~~~~---------~~~~lv~e~~~g~~~~~~~l~~~~-~~-~~~~~~~~~~~~~l~~lh~~~~ivH~Dl~p~Nili~ 149 (187)
T cd05119 81 VPKPIDL---------NRHVLVMEFIGGDGIPAPRLKDVR-LL-EDPEELYDQILELMRKLYREAGLVHGDLSEYNILVD 149 (187)
T ss_pred CCceEec---------CCCEEEEEEeCCCCccChhhhhhh-hc-ccHHHHHHHHHHHHHHHhhccCcCcCCCChhhEEEE
Confidence 2333222 135899999997 221 1122111 11 6788999999999999999 9999999999999999
Q ss_pred CCCceeeeccCccccc
Q 007541 161 ADCKLKICDFGLARVA 176 (599)
Q Consensus 161 ~~~~lKL~DFGlA~~~ 176 (599)
++.++|+|||.+...
T Consensus 150 -~~~~~liDfg~a~~~ 164 (187)
T cd05119 150 -DGKVYIIDVPQAVEI 164 (187)
T ss_pred -CCcEEEEECcccccc
Confidence 999999999999654
No 432
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.67 E-value=5.6e-17 Score=159.33 Aligned_cols=242 Identities=17% Similarity=0.229 Sum_probs=178.2
Q ss_pred ceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEE
Q 007541 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIY 103 (599)
Q Consensus 24 rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~iy 103 (599)
...++-+|.....|..|+++. .|..+++|+++-......-.+.+..|.-.|+-+.||||+.+++.+..+ .++.
T Consensus 191 ~lnl~tkl~e~hsgelwrgrw--qgndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsp-----pnlv 263 (448)
T KOG0195|consen 191 SLNLITKLAESHSGELWRGRW--QGNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSP-----PNLV 263 (448)
T ss_pred hhhhhhhhccCCCcccccccc--cCcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCC-----CCce
Confidence 344567788899999999964 577888888764333333334566788889999999999999998544 4789
Q ss_pred EEEecCC-cCHHHHHHhCC--CCCHHHHHHHHHHHHhhhhhcccCc--eEeecCCCCcEEeCCCCceeee--ccCccccc
Q 007541 104 VVFELME-SDLHQVIKAND--DLTPEHYQFFLYQLLRGLKYIHTAN--VFHRDLKPKNILANADCKLKIC--DFGLARVA 176 (599)
Q Consensus 104 lV~E~~~-g~L~~~i~~~~--~lse~~i~~i~~QLl~aL~yLHs~g--IvHrDLKP~NILv~~~~~lKL~--DFGlA~~~ 176 (599)
++..||+ |+|+.++.... ..+..++-.|...|++|++|||+.. |.---|....++||++...+|. |--++..
T Consensus 264 ~isq~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmidedltarismad~kfsfq- 342 (448)
T KOG0195|consen 264 IISQYMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLTARISMADTKFSFQ- 342 (448)
T ss_pred EeeeeccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecchhhhheecccceeeee-
Confidence 9999999 89999998654 3567788899999999999999985 4444688899999998665543 3222211
Q ss_pred cCCCCCcccccccccCccccCcccccccc-CCCCcchhhHhHHHHHHHHHhCCCCCCCCChhhHHHHHHHhcCCCCHHHH
Q 007541 177 FNDTPTAIFWTDYVATRWYRAPELCGSFF-SKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAI 255 (599)
Q Consensus 177 ~~~~~~~~~~t~~~gt~~Y~APE~l~~~~-~~ys~~~DIWSlG~Il~eLltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i 255 (599)
.....-++.|++||.+.... ..--.++||||++++++||.|...||...+..+.-.+|.
T Consensus 343 ---------e~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmkia----------- 402 (448)
T KOG0195|consen 343 ---------EVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKIA----------- 402 (448)
T ss_pred ---------ccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhhh-----------
Confidence 12335577899999885521 122347899999999999999999998766544222221
Q ss_pred HHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHH
Q 007541 256 ARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLL 335 (599)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL 335 (599)
++.++ ..+.|.+++....|+
T Consensus 403 -----------------------------------------------------leglr-------v~ippgis~hm~klm 422 (448)
T KOG0195|consen 403 -----------------------------------------------------LEGLR-------VHIPPGISRHMNKLM 422 (448)
T ss_pred -----------------------------------------------------hcccc-------ccCCCCccHHHHHHH
Confidence 01111 123467889999999
Q ss_pred HHhcccCCCCCCCHHHHh
Q 007541 336 ERMLAFEPKDRPTAEEAL 353 (599)
Q Consensus 336 ~~mL~~DP~~RpTa~e~L 353 (599)
.-|+.-||.+||..+.++
T Consensus 423 ~icmnedpgkrpkfdmiv 440 (448)
T KOG0195|consen 423 NICMNEDPGKRPKFDMIV 440 (448)
T ss_pred HHHhcCCCCcCCCcceeh
Confidence 999999999999987664
No 433
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.62 E-value=2.8e-15 Score=150.97 Aligned_cols=139 Identities=22% Similarity=0.278 Sum_probs=103.7
Q ss_pred EEEe-ecCceEEEEEEECCCCcEEEEEEecCcc------c-----ChhhHHHHHHHHHHHHhcCCCCc--cccceeecCC
Q 007541 29 EVIG-KGSYGVVCSAYDTRTGEKVAIKKINDIF------E-----HVSDATRILREIKLLRLLRHPDI--VEIKHILLPP 94 (599)
Q Consensus 29 ~~LG-~G~~g~V~~a~d~~tg~~vAIK~i~~~~------~-----~~~~~~~i~rEi~iL~~l~HpnI--v~l~~v~~~~ 94 (599)
..|| .|+.|+||.+.. .+..+|||.+.... . ......++.+|+.++..|+|++| .+.+.+....
T Consensus 37 ~~lg~~~g~gtv~~v~~--~~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~ 114 (239)
T PRK01723 37 RVVGSAKGRGTTWFVQT--PGVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR 114 (239)
T ss_pred ceeecCCCCccEEEEEe--CCceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence 4576 788888888865 37889999875310 0 11234578899999999998775 5566554322
Q ss_pred CcCCCccEEEEEecCCc--CHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCc
Q 007541 95 SRREFKDIYVVFELMES--DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGL 172 (599)
Q Consensus 95 s~~~~~~iylV~E~~~g--~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGl 172 (599)
.. .....++|||+++| +|.+++.. ..+++.. +.||+.+|.+||++||+||||||.|||++.++.++|+|||.
T Consensus 115 ~~-~~~~~~lV~e~l~G~~~L~~~l~~-~~l~~~~----~~~i~~~l~~lH~~GI~HrDlkp~NILv~~~~~v~LIDfg~ 188 (239)
T PRK01723 115 HG-LFYRADILIERIEGARDLVALLQE-APLSEEQ----WQAIGQLIARFHDAGVYHADLNAHNILLDPDGKFWLIDFDR 188 (239)
T ss_pred cC-cceeeeEEEEecCCCCCHHHHHhc-CCCCHHH----HHHHHHHHHHHHHCCCCCCCCCchhEEEcCCCCEEEEECCC
Confidence 11 11123599999995 88888765 3566543 67899999999999999999999999999999999999998
Q ss_pred ccc
Q 007541 173 ARV 175 (599)
Q Consensus 173 A~~ 175 (599)
++.
T Consensus 189 ~~~ 191 (239)
T PRK01723 189 GEL 191 (239)
T ss_pred ccc
Confidence 864
No 434
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.61 E-value=8e-16 Score=166.82 Aligned_cols=258 Identities=25% Similarity=0.260 Sum_probs=199.0
Q ss_pred CCceEEEEEEee--cCceEEEEEEE--CCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcC-CCCccccceeecCCCc
Q 007541 22 GSRYKIEEVIGK--GSYGVVCSAYD--TRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLR-HPDIVEIKHILLPPSR 96 (599)
Q Consensus 22 ~~rY~i~~~LG~--G~~g~V~~a~d--~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~-HpnIv~l~~v~~~~s~ 96 (599)
..++.+.+.+|. |.+|.||.+.. ..++..+|+|+-+..........+-++|+.--+.+. |+|.++....+
T Consensus 113 ~~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~----- 187 (524)
T KOG0601|consen 113 DQRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAW----- 187 (524)
T ss_pred hhhcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCccc-----
Confidence 356778899999 99999999998 889999999986554444444445567888777775 99999977766
Q ss_pred CCCccEEEEEecCCcCHHHHHHhCCC-CCHHHHHHHHHHHHh----hhhhcccCceEeecCCCCcEEeCCC-Cceeeecc
Q 007541 97 REFKDIYVVFELMESDLHQVIKANDD-LTPEHYQFFLYQLLR----GLKYIHTANVFHRDLKPKNILANAD-CKLKICDF 170 (599)
Q Consensus 97 ~~~~~iylV~E~~~g~L~~~i~~~~~-lse~~i~~i~~QLl~----aL~yLHs~gIvHrDLKP~NILv~~~-~~lKL~DF 170 (599)
.+.+.+|+-+|+++.+|..+...... +++..++.++.+... ||.++|+.+|+|-|+||.||+...+ +..+++||
T Consensus 188 e~~~~lfiqtE~~~~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~~~~~~~kp~~i~~~~~~~s~~~~df 267 (524)
T KOG0601|consen 188 EGSGILFIQTELCGESLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTALSHLHSNNIVHDDLKPANIFTTSDWTSCKLTDF 267 (524)
T ss_pred ccCCcceeeeccccchhHHhhhcccccCCchhhhhHHhhhhhcccccccccCCCcccccccchhheecccccceeecCCc
Confidence 44568999999999999998887654 889999999999999 9999999999999999999999999 88999999
Q ss_pred CccccccCCCCCcccc--cccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCCCCC-ChhhHHHHHHHhc
Q 007541 171 GLARVAFNDTPTAIFW--TDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGK-NVVHQLDIMTDLL 247 (599)
Q Consensus 171 GlA~~~~~~~~~~~~~--t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF~g~-~~~~~l~~I~~~l 247 (599)
|+.............. ....+..-|++||++.+ .++...||+++|.++.+..+|..++... +.
T Consensus 268 ~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~---l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~----------- 333 (524)
T KOG0601|consen 268 GLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNG---LATFASDIFSLGEVILEAILGSHLPSVGKNS----------- 333 (524)
T ss_pred ceeEEccCCccccceeeeecCCCCceEeChhhhcc---ccchHhhhcchhhhhHhhHhhcccccCCCCC-----------
Confidence 9998775544222111 22246667999999876 6889999999999999999987665432 10
Q ss_pred CCCCHHHHHHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCC
Q 007541 248 GTPSPEAIARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNA 327 (599)
Q Consensus 248 G~p~~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (599)
.|...... .--.+.+...
T Consensus 334 -----------------~W~~~r~~---------------------------------------------~ip~e~~~~~ 351 (524)
T KOG0601|consen 334 -----------------SWSQLRQG---------------------------------------------YIPLEFCEGG 351 (524)
T ss_pred -----------------Cccccccc---------------------------------------------cCchhhhcCc
Confidence 01111100 0001122334
Q ss_pred CHHHHHHHHHhcccCCCCCCCHHHHhcCccccC
Q 007541 328 NPLALRLLERMLAFEPKDRPTAEEALADPYFKG 360 (599)
Q Consensus 328 s~~a~dLL~~mL~~DP~~RpTa~e~L~HP~f~~ 360 (599)
+......+..|++.||..|++++.+++|+++..
T Consensus 352 s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s 384 (524)
T KOG0601|consen 352 SSSLRSVTSQMLDEDPRLRLTAQILTALNVIHS 384 (524)
T ss_pred chhhhhHHHHhcCcchhhhhHHHHHhccccccc
Confidence 455566999999999999999999999999974
No 435
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.57 E-value=1.2e-14 Score=132.72 Aligned_cols=131 Identities=23% Similarity=0.199 Sum_probs=106.2
Q ss_pred EEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCC--CCccccceeecCCCcCCCccEEE
Q 007541 27 IEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRH--PDIVEIKHILLPPSRREFKDIYV 104 (599)
Q Consensus 27 i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~H--pnIv~l~~v~~~~s~~~~~~iyl 104 (599)
+++.||.|.++.||++.+.. ..++||.+..... ...+.+|+.+++.++| .++.+++..+.. ....|+
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~--~~~~iK~~~~~~~----~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~-----~~~~~~ 70 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKD--EDYVLKINPSREK----GADREREVAILQLLARKGLPVPKVLASGES-----DGWSYL 70 (155)
T ss_pred cceecccccccceEEEEecC--CeEEEEecCCCCc----hhHHHHHHHHHHHHHHcCCCCCeEEEEcCC-----CCccEE
Confidence 46789999999999998744 7899998864322 4567789999999976 478888776632 246899
Q ss_pred EEecCCc-CHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccC---ceEeecCCCCcEEeCCCCceeeeccCcccc
Q 007541 105 VFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTA---NVFHRDLKPKNILANADCKLKICDFGLARV 175 (599)
Q Consensus 105 V~E~~~g-~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~---gIvHrDLKP~NILv~~~~~lKL~DFGlA~~ 175 (599)
||||+.+ .+..+ +......++.+++++|++||.. +++|+||+|.|||++.++.++++|||+++.
T Consensus 71 v~e~~~g~~~~~~-------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~ 138 (155)
T cd05120 71 LMEWIEGETLDEV-------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY 138 (155)
T ss_pred EEEecCCeecccC-------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence 9999986 34433 5566677899999999999985 799999999999999989999999999864
No 436
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.53 E-value=3.7e-15 Score=168.93 Aligned_cols=264 Identities=23% Similarity=0.282 Sum_probs=198.5
Q ss_pred CCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCccc-ChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCc
Q 007541 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFE-HVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFK 100 (599)
Q Consensus 22 ~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~-~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~ 100 (599)
.+.+.+.+-+.+|+++.++.+.-..+|...++|+...... ...+.+.+.++-.++....+|-+++..--+ .-..
T Consensus 803 ~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~-----~~rs 877 (1205)
T KOG0606|consen 803 PDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSF-----PCRS 877 (1205)
T ss_pred CccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCC-----CCCC
Confidence 4567778889999999999998888888888886653221 122344555666666556667777654332 1223
Q ss_pred cEEEEEecCC-cCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccccCC
Q 007541 101 DIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFND 179 (599)
Q Consensus 101 ~iylV~E~~~-g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~ 179 (599)
-.+||++|++ ++|...+...+..+.+-++.++..+..++++||+..+.|+|++|.|+|+..+|..++.|||......-.
T Consensus 878 P~~L~~~~~~~~~~~Skl~~~~~~saepaRs~i~~~vqs~e~L~s~~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~~ 957 (1205)
T KOG0606|consen 878 PLPLVGHYLNGGDLPSKLHNSGCLSAEPARSPILERVQSLESLHSSLRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGLI 957 (1205)
T ss_pred CcchhhHHhccCCchhhhhcCCCcccccccchhHHHHhhhhccccchhhcccccccchhhcccCCcccCccccccccccc
Confidence 5899999998 599999988888999999999999999999999999999999999999999999999999844322110
Q ss_pred CC--------------------------C--cccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCC
Q 007541 180 TP--------------------------T--AIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLF 231 (599)
Q Consensus 180 ~~--------------------------~--~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF 231 (599)
.+ . ...-...++|+.|.+||++.+ ..-..++|.|++|+++++.++|.++|
T Consensus 958 ~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg--~~hgs~ad~~~~g~~l~e~l~g~pp~ 1035 (1205)
T KOG0606|consen 958 PPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLG--RRHGSAADWWSSGVCLFEVLTGIPPF 1035 (1205)
T ss_pred cCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCccccc--ccCCCcchhhhhhhhhhhhhcCCCCC
Confidence 00 0 011123578999999999887 57788999999999999999999999
Q ss_pred CCCChhhHHHHHHHhcCCCCHHHHHHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccHHHHHHHHh
Q 007541 232 PGKNVVHQLDIMTDLLGTPSPEAIARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNEKARRYLSS 311 (599)
Q Consensus 232 ~g~~~~~~l~~I~~~lG~p~~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (599)
.........+.|..
T Consensus 1036 na~tpq~~f~ni~~------------------------------------------------------------------ 1049 (1205)
T KOG0606|consen 1036 NAETPQQIFENILN------------------------------------------------------------------ 1049 (1205)
T ss_pred CCcchhhhhhcccc------------------------------------------------------------------
Confidence 87654433322211
Q ss_pred cccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHH---HHhcCccccCcc
Q 007541 312 MRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAE---EALADPYFKGLA 362 (599)
Q Consensus 312 ~~~~~~~~~~~~~~~~s~~a~dLL~~mL~~DP~~RpTa~---e~L~HP~f~~~~ 362 (599)
...++.......+..+.+++.++|..+|.+|..+. +.-.|+||+...
T Consensus 1050 ----~~~~~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~~~~e~k~~~~~~~~~ 1099 (1205)
T KOG0606|consen 1050 ----RDIPWPEGPEEGSYEAQDLINRLLTEEPTQRLGAKGAAEVKGHPFFQDVD 1099 (1205)
T ss_pred ----CCCCCCCCccccChhhhhhhhhhhccCchhccCcccccccccCCccCCCC
Confidence 11223333345678899999999999999999988 899999999764
No 437
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.40 E-value=3.4e-13 Score=149.50 Aligned_cols=141 Identities=23% Similarity=0.341 Sum_probs=97.8
Q ss_pred ceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccCh--------------------------------hhHHHHHH
Q 007541 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHV--------------------------------SDATRILR 71 (599)
Q Consensus 24 rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~--------------------------------~~~~~i~r 71 (599)
.|+. +.||+|++|.||+|+.+.+|+.||||++....... .....+.+
T Consensus 121 ~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~~ 199 (537)
T PRK04750 121 DFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLHD 199 (537)
T ss_pred hcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHH
Confidence 3554 78999999999999998889999999996431100 11123344
Q ss_pred HHHHHHhc------C----CCCccccceeecCCCcCCCccEEEEEecCCc-CHHHH--HHhCC----CCCHHHHHHHHHH
Q 007541 72 EIKLLRLL------R----HPDIVEIKHILLPPSRREFKDIYVVFELMES-DLHQV--IKAND----DLTPEHYQFFLYQ 134 (599)
Q Consensus 72 Ei~iL~~l------~----HpnIv~l~~v~~~~s~~~~~~iylV~E~~~g-~L~~~--i~~~~----~lse~~i~~i~~Q 134 (599)
|+.+++.. + +.+.+.+-.+|.+- ...-+|||||+.| .|.++ +...+ .+.+..+..++.|
T Consensus 200 ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~----st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Q 275 (537)
T PRK04750 200 ELDLMREAANASQLRRNFEDSDMLYVPEVYWDY----CSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQ 275 (537)
T ss_pred hhCHHHHHHHHHHHHHHccCCCCeecceeeccc----CCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHH
Confidence 44444433 1 23333333444221 2345799999996 77664 33433 3667777888888
Q ss_pred HHhhhhhcccCceEeecCCCCcEEeCCCC----ceeeeccCccccc
Q 007541 135 LLRGLKYIHTANVFHRDLKPKNILANADC----KLKICDFGLARVA 176 (599)
Q Consensus 135 Ll~aL~yLHs~gIvHrDLKP~NILv~~~~----~lKL~DFGlA~~~ 176 (599)
|++ .|++|+|+||.||+++.+| +++++|||++...
T Consensus 276 if~-------~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l 314 (537)
T PRK04750 276 VFR-------DGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSL 314 (537)
T ss_pred HHh-------CCeeeCCCChHHeEEecCCCCCCeEEEEecceEEEC
Confidence 874 8999999999999999988 9999999998654
No 438
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.38 E-value=1.1e-13 Score=139.78 Aligned_cols=188 Identities=21% Similarity=0.245 Sum_probs=129.1
Q ss_pred EEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHH--HHHHhcCCCCccccceeecCCCcCCCccEEEEEecCC-cCHH
Q 007541 38 VVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREI--KLLRLLRHPDIVEIKHILLPPSRREFKDIYVVFELME-SDLH 114 (599)
Q Consensus 38 ~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi--~iL~~l~HpnIv~l~~v~~~~s~~~~~~iylV~E~~~-g~L~ 114 (599)
.||++.|+..|..|+.-.+.....+.-..+.-.++. .-|-++-|.|||+++.+|.+.-..+...+.++.|||. |+|.
T Consensus 81 ~v~lamd~e~g~evvwneVq~~~rK~~~~qeek~~~vFdnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~ 160 (458)
T KOG1266|consen 81 DVYLAMDTEEGVEVVWNEVQFSERKNPKEQEEKRRAVFDNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLK 160 (458)
T ss_pred HHHHHhhhccCchhhHHHHHHHHhcChhhCHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHH
Confidence 467777777777776655432111111111111222 2244556999999999987665556678999999999 7999
Q ss_pred HHHHh----CCCCCHHHHHHHHHHHHhhhhhcccCc--eEeecCCCCcEEeCCCCceeeeccCccccc--cCCCCCcccc
Q 007541 115 QVIKA----NDDLTPEHYQFFLYQLLRGLKYIHTAN--VFHRDLKPKNILANADCKLKICDFGLARVA--FNDTPTAIFW 186 (599)
Q Consensus 115 ~~i~~----~~~lse~~i~~i~~QLl~aL~yLHs~g--IvHrDLKP~NILv~~~~~lKL~DFGlA~~~--~~~~~~~~~~ 186 (599)
++++. ...+.....++|+-||+.||.|||+.. |+|+++..+.|++..+|-+||+--.-.... .+...... -
T Consensus 161 ~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~PpiihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~E-k 239 (458)
T KOG1266|consen 161 QFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDPPIIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAE-K 239 (458)
T ss_pred HHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCCccccCCcchhheeecCCceEEecccCccccchhhhhhhHhh-h
Confidence 98875 236889999999999999999999986 999999999999999999988642211110 00000000 0
Q ss_pred cccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCC
Q 007541 187 TDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGK 228 (599)
Q Consensus 187 t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~ 228 (599)
....+-++|.+||.=.. .+.+.++|||++|+...+|..|.
T Consensus 240 ~~~~~~~g~~a~~sg~~--tn~~~a~dIy~fgmcAlemailE 279 (458)
T KOG1266|consen 240 SVNTSLPGFSAPESGTT--TNTTGASDIYKFGMCALEMAILE 279 (458)
T ss_pred hccccCCccccCCcCcc--cccccchhhhhhhHHHHHHHHhe
Confidence 01124567899996443 56778999999999999998876
No 439
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.37 E-value=6e-12 Score=138.13 Aligned_cols=184 Identities=23% Similarity=0.336 Sum_probs=137.2
Q ss_pred eEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEEE
Q 007541 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYV 104 (599)
Q Consensus 25 Y~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~iyl 104 (599)
|.| ...+-++.+..-.|..+.++.+|.|.+.+.... .....+.+-+..|+.++||||+++++.+. ...++||
T Consensus 15 Y~l-e~~~~~~~a~~~~~t~k~~~~~vsVF~~~~~~~--~~~~~~~~A~k~lKtlRHP~Il~yL~t~e-----~~~~~yl 86 (690)
T KOG1243|consen 15 YDL-EETAFSSEALWPDGTRKADGGPVSVFVYKRSNG--EVTELAKRAVKRLKTLRHPNILSYLDTTE-----EEGTLYL 86 (690)
T ss_pred ccc-ccccCCCcccccccceeccCCceEEEEEeCCCc--hhhHHHHHHHHHhhhccCchhhhhhhhhc-----ccCceEE
Confidence 455 445555555433466678899999998875433 34556778899999999999999999884 4458999
Q ss_pred EEecCCcCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcc-cCceEeecCCCCcEEeCCCCceeeeccCccccccCCCCCc
Q 007541 105 VFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIH-TANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTA 183 (599)
Q Consensus 105 V~E~~~g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLH-s~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~~~~ 183 (599)
|+|-+.. |..+++. ++...+..-++||+.||.||| ..+++|++|.-+-++|+..|..||++|.++........
T Consensus 87 vTErV~P-l~~~lk~---l~~~~v~~Gl~qIl~AL~FL~~d~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~-- 160 (690)
T KOG1243|consen 87 VTERVRP-LETVLKE---LGKEEVCLGLFQILAALSFLNDDCNLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNA-- 160 (690)
T ss_pred Eeecccc-HHHHHHH---hHHHHHHHHHHHHHHHHHHHhccCCeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCc--
Confidence 9997763 4445544 337788889999999999997 67899999999999999999999999999876533221
Q ss_pred ccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhC
Q 007541 184 IFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTG 227 (599)
Q Consensus 184 ~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG 227 (599)
....+.---.|..|+.+.. .. -.+|.|-|||++++++.|
T Consensus 161 -~~~~~~~~~s~~~P~~~~~--s~--~s~D~~~Lg~li~el~ng 199 (690)
T KOG1243|consen 161 -PAKSLYLIESFDDPEEIDP--SE--WSIDSWGLGCLIEELFNG 199 (690)
T ss_pred -ccccchhhhcccChhhcCc--cc--cchhhhhHHHHHHHHhCc
Confidence 0111222234778887654 22 467999999999999999
No 440
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.34 E-value=3.9e-12 Score=123.76 Aligned_cols=139 Identities=22% Similarity=0.264 Sum_probs=100.3
Q ss_pred EEEEeecCceEEEEEEECC------CCcEEEEEEecCc----------------cc----ChhhHHHHH----HHHHHHH
Q 007541 28 EEVIGKGSYGVVCSAYDTR------TGEKVAIKKINDI----------------FE----HVSDATRIL----REIKLLR 77 (599)
Q Consensus 28 ~~~LG~G~~g~V~~a~d~~------tg~~vAIK~i~~~----------------~~----~~~~~~~i~----rEi~iL~ 77 (599)
...||.|--+.||.|.... .+..+|||+.+-. +. +.+....+. +|...|+
T Consensus 2 ~g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~ 81 (197)
T cd05146 2 NGCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLK 81 (197)
T ss_pred CCccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHH
Confidence 3569999999999998654 3579999987421 10 011122233 7999999
Q ss_pred hcCC--CCccccceeecCCCcCCCccEEEEEecCCcC-HHHHHHhCCCCCHHHHHHHHHHHHhhhhhc-ccCceEeecCC
Q 007541 78 LLRH--PDIVEIKHILLPPSRREFKDIYVVFELMESD-LHQVIKANDDLTPEHYQFFLYQLLRGLKYI-HTANVFHRDLK 153 (599)
Q Consensus 78 ~l~H--pnIv~l~~v~~~~s~~~~~~iylV~E~~~g~-L~~~i~~~~~lse~~i~~i~~QLl~aL~yL-Hs~gIvHrDLK 153 (599)
++.. -++.+++.+. .-+|||||++++ +..-......+++..+..++.|++.+|..| |..||||+||+
T Consensus 82 rl~~~Gv~vP~pi~~~---------~~~lvME~Ig~~~~~~~~Lkd~~~~~~~~~~i~~~i~~~l~~l~H~~glVHGDLs 152 (197)
T cd05146 82 RMQKAGIPCPEVVVLK---------KHVLVMSFIGDDQVPAPKLKDAKLNDEEMKNAYYQVLSMMKQLYKECNLVHADLS 152 (197)
T ss_pred HHHHcCCCCCeEEEec---------CCEEEEEEcCCCCccchhhhccccCHHHHHHHHHHHHHHHHHHHHhCCeecCCCC
Confidence 8863 4555555442 347999999963 322112223466677888899999999998 89999999999
Q ss_pred CCcEEeCCCCceeeeccCccccc
Q 007541 154 PKNILANADCKLKICDFGLARVA 176 (599)
Q Consensus 154 P~NILv~~~~~lKL~DFGlA~~~ 176 (599)
+.|||+. ++.+.|+|||.|...
T Consensus 153 ~~NIL~~-~~~v~iIDF~qav~~ 174 (197)
T cd05146 153 EYNMLWH-DGKVWFIDVSQSVEP 174 (197)
T ss_pred HHHEEEE-CCcEEEEECCCceeC
Confidence 9999997 578999999988654
No 441
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.32 E-value=8.1e-12 Score=136.59 Aligned_cols=140 Identities=21% Similarity=0.261 Sum_probs=92.5
Q ss_pred EEEeecCceEEEEEEECCCCcEEEEEEecCcccChhh--------------------------------HH------HHH
Q 007541 29 EVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSD--------------------------------AT------RIL 70 (599)
Q Consensus 29 ~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~--------------------------------~~------~i~ 70 (599)
+.||+|++|.||+|+. .+|+.||||+........-. .. .+.
T Consensus 123 ~plasaSigQVh~A~l-~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~ 201 (437)
T TIGR01982 123 KPLAAASIAQVHRARL-VDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLR 201 (437)
T ss_pred cceeeeehhheEEEEe-cCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHH
Confidence 5699999999999986 47999999998642111000 00 122
Q ss_pred HHHHHHHhc----CCCCccccceeecCCCcCCCccEEEEEecCCc-CHHHHHHhC-CCCCHHHHHHHHHHHHh-hhhhcc
Q 007541 71 REIKLLRLL----RHPDIVEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKAN-DDLTPEHYQFFLYQLLR-GLKYIH 143 (599)
Q Consensus 71 rEi~iL~~l----~HpnIv~l~~v~~~~s~~~~~~iylV~E~~~g-~L~~~i~~~-~~lse~~i~~i~~QLl~-aL~yLH 143 (599)
+|...+..+ +|.+-+.+-.++..-+ ..-+|||||++| +|.++.... .... ...+..+++. .+..+|
T Consensus 202 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~----~~~vLvmE~i~G~~L~~~~~~~~~~~~---~~~ia~~~~~~~l~ql~ 274 (437)
T TIGR01982 202 REAANASELGENFKNDPGVYVPEVYWDRT----SERVLTMEWIDGIPLSDIAALDEAGLD---RKALAENLARSFLNQVL 274 (437)
T ss_pred HHHHHHHHHHHhcCCCCCEEeCCEehhhc----CCceEEEEeECCcccccHHHHHhcCCC---HHHHHHHHHHHHHHHHH
Confidence 344433333 2333344444443221 245899999996 777665432 1222 2345555555 467889
Q ss_pred cCceEeecCCCCcEEeCCCCceeeeccCccccc
Q 007541 144 TANVFHRDLKPKNILANADCKLKICDFGLARVA 176 (599)
Q Consensus 144 s~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~ 176 (599)
..|++|+|++|.||+++.+|.++|+|||++...
T Consensus 275 ~~g~~H~D~hPgNilv~~~g~i~liDfG~~~~l 307 (437)
T TIGR01982 275 RDGFFHADLHPGNIFVLKDGKIIALDFGIVGRL 307 (437)
T ss_pred hCCceeCCCCcccEEECCCCcEEEEeCCCeeEC
Confidence 999999999999999999999999999998654
No 442
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.31 E-value=5.3e-12 Score=119.25 Aligned_cols=126 Identities=19% Similarity=0.154 Sum_probs=92.3
Q ss_pred EEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCcc-ccceeecCCCcCCCccEEEEE
Q 007541 28 EEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIV-EIKHILLPPSRREFKDIYVVF 106 (599)
Q Consensus 28 ~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv-~l~~v~~~~s~~~~~~iylV~ 106 (599)
++.|+.|.++.||++... ++.|+||....... ......+|+.+++.+.+.+++ +++... . ..-++||
T Consensus 3 ~~~l~~G~~~~vy~~~~~--~~~~~lK~~~~~~~---~~~~~~~E~~~l~~l~~~~~~P~~~~~~--~-----~~~~lv~ 70 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVA--NKKYVVRIPGNGTE---LLINRENEAENSKLAAEAGIGPKLYYFD--P-----ETGVLIT 70 (170)
T ss_pred eeecCCcccCceEEEEEC--CeEEEEEeCCCCcc---cccCHHHHHHHHHHHHHhCCCCceEEEe--C-----CCCeEEE
Confidence 467899999999999754 78899998754321 122346899999988755544 343332 1 1237999
Q ss_pred ecCCc-CHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCce-----EeecCCCCcEEeCCCCceeeeccCccc
Q 007541 107 ELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANV-----FHRDLKPKNILANADCKLKICDFGLAR 174 (599)
Q Consensus 107 E~~~g-~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gI-----vHrDLKP~NILv~~~~~lKL~DFGlA~ 174 (599)
|+++| ++.+. ......++.+++++|..||+.++ +|+|++|.||+++ ++.++|+|||.+.
T Consensus 71 e~i~G~~l~~~--------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~ 135 (170)
T cd05151 71 EFIEGSELLTE--------DFSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAG 135 (170)
T ss_pred EecCCCccccc--------cccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEeccccc
Confidence 99997 44332 01124467899999999999985 9999999999999 6789999999885
No 443
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.27 E-value=7e-12 Score=136.37 Aligned_cols=198 Identities=21% Similarity=0.201 Sum_probs=148.8
Q ss_pred CCceEEEEEEeecCceEEEEEEEC-CCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcC-CCCccccceeecCCCcCCC
Q 007541 22 GSRYKIEEVIGKGSYGVVCSAYDT-RTGEKVAIKKINDIFEHVSDATRILREIKLLRLLR-HPDIVEIKHILLPPSRREF 99 (599)
Q Consensus 22 ~~rY~i~~~LG~G~~g~V~~a~d~-~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~-HpnIv~l~~v~~~~s~~~~ 99 (599)
..+|..+..||.|.|+.|+...-. .++..|++|-+.+......+...-+.|+.+...+. |.++++....| ...
T Consensus 264 ~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W-----~~~ 338 (524)
T KOG0601|consen 264 LTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSW-----SQL 338 (524)
T ss_pred cCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCc-----ccc
Confidence 356788999999999999987644 67889999988765554444455567888877775 89999887776 344
Q ss_pred ccEEEEEecCCc-CHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCC-CceeeeccCcccccc
Q 007541 100 KDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANAD-CKLKICDFGLARVAF 177 (599)
Q Consensus 100 ~~iylV~E~~~g-~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~-~~lKL~DFGlA~~~~ 177 (599)
.+.|+-.|||++ ++...+.....+.+...+.+..|++.++.++|+..++|+|+||+||++..+ +..++.|||.+....
T Consensus 339 r~~~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s~~~~~~d~~psni~i~~~~~~~~~~~~~~~t~~~ 418 (524)
T KOG0601|consen 339 RQGYIPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIHSKLFVHLDVKPSNILISNDGFFSKLGDFGCWTRLA 418 (524)
T ss_pred ccccCchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhccccccchhhhcccccccceeeccchhhhhccccccccccc
Confidence 567899999984 444444333468899999999999999999999999999999999999886 778999999886321
Q ss_pred CCCCCcccccccccCcccc-CccccccccCCCCcchhhHhHHHHHHHHHhCCCCC
Q 007541 178 NDTPTAIFWTDYVATRWYR-APELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLF 231 (599)
Q Consensus 178 ~~~~~~~~~t~~~gt~~Y~-APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF 231 (599)
- ........-++. ..|++... ..+..+.|++|||.-+.+.++|.++-
T Consensus 419 ~------~~~~~~~~~r~~p~~~~~~e~-~~~~~~~~~~sl~~~~~e~~~~~~ls 466 (524)
T KOG0601|consen 419 F------SSGVFHHIDRLYPIAEILLED-YPHLSKADIFSLGLSVDEAITGSPLS 466 (524)
T ss_pred e------ecccccccccccccchhhccc-cccccccccccccccccccccCcccC
Confidence 1 111122233344 35554432 57788999999999999999998654
No 444
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=99.12 E-value=1e-09 Score=117.43 Aligned_cols=169 Identities=20% Similarity=0.258 Sum_probs=130.6
Q ss_pred CceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEEEEEecCCc--C
Q 007541 35 SYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVVFELMES--D 112 (599)
Q Consensus 35 ~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~iylV~E~~~g--~ 112 (599)
-..+.|+|....+|..|++|.+.-. .. ......-.-+..++++.|.|||.+.++|.... .+...+++|++|.++ +
T Consensus 288 ~~~Ttyk~~s~~DG~~YvLkRlhg~-r~-~~~nk~t~lve~wkkl~h~NvV~frevf~t~t-F~D~SlvlvYDYyP~s~T 364 (655)
T KOG3741|consen 288 FSITTYKATSNVDGNAYVLKRLHGD-RD-QSTNKDTSLVEAWKKLCHTNVVPFREVFLTYT-FGDLSLVLVYDYYPSSPT 364 (655)
T ss_pred ccceeEeeeeccCCceeeeeeeccc-cc-cCcccchHHHHHHHHhccCceeehhhhhhhhc-cCcceEEEEEecCCCCch
Confidence 4568899999999999999998321 11 11111223477889999999999999997443 455679999999994 7
Q ss_pred HHHHHHh---------------CCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCcccccc
Q 007541 113 LHQVIKA---------------NDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAF 177 (599)
Q Consensus 113 L~~~i~~---------------~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~ 177 (599)
|.++.-. +.+.+|+.+|.|+.||..||.++|+.|+..+-|.|.+||++.+.+++|..-|......
T Consensus 365 L~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssGLAck~L~~~kIlv~G~~RIriS~C~i~Dvl~ 444 (655)
T KOG3741|consen 365 LYDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSGLACKTLDLKKILVTGKMRIRISGCGIMDVLQ 444 (655)
T ss_pred HHHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcCceeecccHhHeEeeCcceEEEecccceeeec
Confidence 8876532 2357899999999999999999999999999999999999999899998888776654
Q ss_pred CCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCC
Q 007541 178 NDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGK 228 (599)
Q Consensus 178 ~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~ 228 (599)
++.. |.+.+ -.+-|.=.||.+++.|.||.
T Consensus 445 ~d~~-----------------~~le~-----~Qq~D~~~lG~ll~aLAt~~ 473 (655)
T KOG3741|consen 445 EDPT-----------------EPLES-----QQQNDLRDLGLLLLALATGT 473 (655)
T ss_pred CCCC-----------------cchhH-----HhhhhHHHHHHHHHHHhhcc
Confidence 3320 11211 24579999999999999996
No 445
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.05 E-value=1.1e-09 Score=107.62 Aligned_cols=142 Identities=18% Similarity=0.269 Sum_probs=97.9
Q ss_pred EEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCC--CccccceeecCCCcCCCccEEEEE
Q 007541 29 EVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHP--DIVEIKHILLPPSRREFKDIYVVF 106 (599)
Q Consensus 29 ~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~Hp--nIv~l~~v~~~~s~~~~~~iylV~ 106 (599)
+.|+.|.++.||++.... |+.+++|+....... .....+.+|..+++.+++. ++.+++.+.... ......|+||
T Consensus 4 ~~l~~G~~n~~~~v~~~~-g~~~ilK~~~~~~~~-~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~--~~~~~~~~v~ 79 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGG-GRRLVLRRPPPGALL-PSAHDVAREYRVLRALAGTGVPVPKVLALCEDP--SVLGTPFYVM 79 (223)
T ss_pred eecCCCccceEEEEEecC-CcceEEEeCCCcccC-cccccHHHHHHHHHHhhCCCCCCCCEEEECCCC--CccCCceEEE
Confidence 568999999999997643 689999987543221 1344677999999999753 355565554221 1123568999
Q ss_pred ecCCc-CHHHHHHhCCCCCHHHHHHHHHHHHhhhhhccc-----------------------------------------
Q 007541 107 ELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHT----------------------------------------- 144 (599)
Q Consensus 107 E~~~g-~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs----------------------------------------- 144 (599)
|+++| +|.+.+.. ..+++.....++.+++++|..||+
T Consensus 80 e~i~G~~l~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (223)
T cd05154 80 ERVDGRVLRDRLLR-PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAME 158 (223)
T ss_pred EEeCCEecCCCCCC-CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHH
Confidence 99996 44443321 235555555666666666666653
Q ss_pred ---------------CceEeecCCCCcEEeCC--CCceeeeccCcccc
Q 007541 145 ---------------ANVFHRDLKPKNILANA--DCKLKICDFGLARV 175 (599)
Q Consensus 145 ---------------~gIvHrDLKP~NILv~~--~~~lKL~DFGlA~~ 175 (599)
..++|+|+.|.|||++. ++.+.|+||+.+..
T Consensus 159 ~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 159 RLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred HHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 35799999999999998 66789999998864
No 446
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.03 E-value=1.7e-09 Score=102.21 Aligned_cols=142 Identities=23% Similarity=0.294 Sum_probs=105.5
Q ss_pred EEEEEeecCceEEEEEEECCCCcEEEEEEe-cCcccChh-----hHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCc
Q 007541 27 IEEVIGKGSYGVVCSAYDTRTGEKVAIKKI-NDIFEHVS-----DATRILREIKLLRLLRHPDIVEIKHILLPPSRREFK 100 (599)
Q Consensus 27 i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i-~~~~~~~~-----~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~ 100 (599)
.+..|-+|+-+.|+++. ..|+..+||.= .+.+.+.. ...|..+|.++|.++.--.|.-..=++.+..
T Consensus 11 ~l~likQGAEArv~~~~--~~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~----- 83 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGS--FSGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTY----- 83 (229)
T ss_pred cceeeeccceeeEeeec--cCCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecC-----
Confidence 57889999999999995 56889888853 33333332 3457788999998886444443333343321
Q ss_pred cEEEEEecCCc--CHHHHHHhCC--CCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCc---eeeeccCcc
Q 007541 101 DIYVVFELMES--DLHQVIKAND--DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCK---LKICDFGLA 173 (599)
Q Consensus 101 ~iylV~E~~~g--~L~~~i~~~~--~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~---lKL~DFGlA 173 (599)
.-+|+||+++| ++.+++.... .........++.+|-+.|.-||.++|||+||..+||++.+++. +-|+|||++
T Consensus 84 ~~~i~ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~ndiiHGDLTTSNill~~~~~~~~~~lIdfgls 163 (229)
T KOG3087|consen 84 GGQIYMEFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDNDIIHGDLTTSNILLRSDGNQITPILIDFGLS 163 (229)
T ss_pred CCeEEEEeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhCCeecccccccceEEecCCCcCceEEEeecch
Confidence 23689999998 8999887643 2333344789999999999999999999999999999887654 489999999
Q ss_pred cc
Q 007541 174 RV 175 (599)
Q Consensus 174 ~~ 175 (599)
..
T Consensus 164 ~~ 165 (229)
T KOG3087|consen 164 SV 165 (229)
T ss_pred hc
Confidence 65
No 447
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.00 E-value=2.8e-09 Score=101.20 Aligned_cols=130 Identities=22% Similarity=0.313 Sum_probs=93.4
Q ss_pred EEEeecCceEEEEEEECCCCcEEEEEE-ecCcccChhh-----HHHHHHHHHHHHhcCCC--CccccceeecCCCcCCCc
Q 007541 29 EVIGKGSYGVVCSAYDTRTGEKVAIKK-INDIFEHVSD-----ATRILREIKLLRLLRHP--DIVEIKHILLPPSRREFK 100 (599)
Q Consensus 29 ~~LG~G~~g~V~~a~d~~tg~~vAIK~-i~~~~~~~~~-----~~~i~rEi~iL~~l~Hp--nIv~l~~v~~~~s~~~~~ 100 (599)
..|++|+-+.++.+.. -|..+++|. +++.+.+..- ..+..+|..+|..+.-- ++..++++...
T Consensus 2 ~~i~~GAEa~i~~~~~--~g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~------- 72 (204)
T COG3642 2 DLIKQGAEAIIYLTDF--LGLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPD------- 72 (204)
T ss_pred chhhCCcceeEEeeec--cCcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCC-------
Confidence 3578899999998854 355577774 3344444332 34567899999888633 34444444321
Q ss_pred cEEEEEecCCc-CHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCcccc
Q 007541 101 DIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARV 175 (599)
Q Consensus 101 ~iylV~E~~~g-~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~ 175 (599)
.-.|||||++| .|.+++... .-.+++.|-.-+.-||.+||+|+||.++||++..++ +-++||||+..
T Consensus 73 ~~~I~me~I~G~~lkd~l~~~-------~~~~~r~vG~~vg~lH~~givHGDLTtsNiIl~~~~-i~~IDfGLg~~ 140 (204)
T COG3642 73 NGLIVMEYIEGELLKDALEEA-------RPDLLREVGRLVGKLHKAGIVHGDLTTSNIILSGGR-IYFIDFGLGEF 140 (204)
T ss_pred CCEEEEEEeCChhHHHHHHhc-------chHHHHHHHHHHHHHHhcCeecCCCccceEEEeCCc-EEEEECCcccc
Confidence 34699999998 566677665 145667777788889999999999999999998664 99999999974
No 448
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.93 E-value=8.8e-09 Score=105.42 Aligned_cols=135 Identities=15% Similarity=0.100 Sum_probs=93.5
Q ss_pred EEEEEEECCCCcEEEEEEecCcccCh---------hhHHHHHHHHHHHHhcCCCCcc--ccceeecCCCcCCCccEEEEE
Q 007541 38 VVCSAYDTRTGEKVAIKKINDIFEHV---------SDATRILREIKLLRLLRHPDIV--EIKHILLPPSRREFKDIYVVF 106 (599)
Q Consensus 38 ~V~~a~d~~tg~~vAIK~i~~~~~~~---------~~~~~i~rEi~iL~~l~HpnIv--~l~~v~~~~s~~~~~~iylV~ 106 (599)
.|.+. ...|+.|.||......... .-...+.+|...+..|..-+|. .++.+...........-+||+
T Consensus 37 rvvr~--~~~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~s~LVt 114 (268)
T PRK15123 37 RTLRF--ELAGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRTSFIIT 114 (268)
T ss_pred eEEEE--EECCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccceeEEEE
Confidence 34454 3457789999664211100 0011367899988888543433 333333222111134568999
Q ss_pred ecCCc--CHHHHHHh--CCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCC-------CCceeeeccCccc
Q 007541 107 ELMES--DLHQVIKA--NDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANA-------DCKLKICDFGLAR 174 (599)
Q Consensus 107 E~~~g--~L~~~i~~--~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~-------~~~lKL~DFGlA~ 174 (599)
|++++ +|.+++.. ....+......++.+|...+.-||.+||+|+||++.|||++. +..+.|+||+.++
T Consensus 115 e~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~~ 193 (268)
T PRK15123 115 EDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAAGINHRDCYICHFLLHLPFPGREEDLKLSVIDLHRAQ 193 (268)
T ss_pred eeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCcCccCCCChhhEEEeccccCCCCCceEEEEECCccc
Confidence 99996 79988864 235667788899999999999999999999999999999975 4679999999885
No 449
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.92 E-value=9.7e-09 Score=101.16 Aligned_cols=139 Identities=22% Similarity=0.260 Sum_probs=98.3
Q ss_pred ceEEEEEEEC---CCCcEEEEEEecCcc-----cChhhHHHHHHHHHHHHhcCCCC--ccccceeecCCCcCCCccEEEE
Q 007541 36 YGVVCSAYDT---RTGEKVAIKKINDIF-----EHVSDATRILREIKLLRLLRHPD--IVEIKHILLPPSRREFKDIYVV 105 (599)
Q Consensus 36 ~g~V~~a~d~---~tg~~vAIK~i~~~~-----~~~~~~~~i~rEi~iL~~l~Hpn--Iv~l~~v~~~~s~~~~~~iylV 105 (599)
-+.+|.+... ..++.+-+|...... .......+..+|...+..|..-. +.+.+.+...... ....-+||
T Consensus 17 R~~~~~~~~~~~~~~~~~y~~k~~~~~~~~~~~~~~~~~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~-~~~~s~li 95 (206)
T PF06293_consen 17 RRGGWFGVQRVVDLVGRRYYRKRLWNKLRRDRLRFPLRRSRAKREWRNLQRLREAGIPTPEPVAYGERRKG-GGYRSYLI 95 (206)
T ss_pred CceEEEEEEccccccceEEEECCeechhccchhhhcccchHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCC-CceeEEEE
Confidence 3444555443 235566666532211 11123456788999888775433 3444444433221 12456899
Q ss_pred EecCCc--CHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCC---ceeeeccCcccc
Q 007541 106 FELMES--DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADC---KLKICDFGLARV 175 (599)
Q Consensus 106 ~E~~~g--~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~---~lKL~DFGlA~~ 175 (599)
+|++++ +|.+++.....++......++.++...+.-||.+||+|+|+++.|||++.++ .+.|+||+.++.
T Consensus 96 te~l~~~~~L~~~~~~~~~~~~~~~~~ll~~l~~~i~~lH~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~ 170 (206)
T PF06293_consen 96 TEALPGAQDLRDLLQQWEQLDPSQRRELLRALARLIAKLHDAGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRF 170 (206)
T ss_pred EEeCCCcccHHHHHHhhcccchhhHHHHHHHHHHHHHHHHHCcCCCCCCCcccEEEeCCCCceeEEEEcchhcee
Confidence 999996 7999998755577888899999999999999999999999999999999987 899999998864
No 450
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.90 E-value=6.5e-09 Score=100.74 Aligned_cols=127 Identities=28% Similarity=0.309 Sum_probs=82.4
Q ss_pred EEEEEEECCCCcEEEEEEecCc----------------cc------C--hhhHHHHHHHHHHHHhcCCC--Cccccceee
Q 007541 38 VVCSAYDTRTGEKVAIKKINDI----------------FE------H--VSDATRILREIKLLRLLRHP--DIVEIKHIL 91 (599)
Q Consensus 38 ~V~~a~d~~tg~~vAIK~i~~~----------------~~------~--~~~~~~i~rEi~iL~~l~Hp--nIv~l~~v~ 91 (599)
.||.|.. ..|..+|||+.... +. . ........+|...|..+..- ++.+++.+.
T Consensus 1 ~Vy~~~~-~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~ 79 (188)
T PF01163_consen 1 DVYHAID-PDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN 79 (188)
T ss_dssp EEEEEEE-CTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE
T ss_pred CEEEEEC-CCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe
Confidence 3888876 56779999987421 00 0 01123567899999999855 455655443
Q ss_pred cCCCcCCCccEEEEEecCC--cCHHHHHHhCCCCCHHHHHHHHHHHHhhhhh-cccCceEeecCCCCcEEeCCCCceeee
Q 007541 92 LPPSRREFKDIYVVFELME--SDLHQVIKANDDLTPEHYQFFLYQLLRGLKY-IHTANVFHRDLKPKNILANADCKLKIC 168 (599)
Q Consensus 92 ~~~s~~~~~~iylV~E~~~--g~L~~~i~~~~~lse~~i~~i~~QLl~aL~y-LHs~gIvHrDLKP~NILv~~~~~lKL~ 168 (599)
.-+|||||++ |.....+... .++.+....++.+++..+.. +|..||+|+||.+.|||++.+ .+.|+
T Consensus 80 ---------~~~ivME~I~~~G~~~~~l~~~-~~~~~~~~~~~~~il~~~~~~~~~~givHGDLs~~NIlv~~~-~~~iI 148 (188)
T PF01163_consen 80 ---------RNVIVMEYIGEDGVPLPRLKDV-DLSPEEPKELLEEILEEIIKMLHKAGIVHGDLSEYNILVDDG-KVYII 148 (188)
T ss_dssp ---------TTEEEEE--EETTEEGGCHHHC-GGGGSTHHHHHHHHHHHHHHHHHCTTEEESS-STTSEEEETT-CEEE-
T ss_pred ---------CCEEEEEecCCCccchhhHHhc-cccchhHHHHHHHHHHHHHHHHHhcCceecCCChhhEEeecc-eEEEE
Confidence 1279999999 6322333322 13356677888888885555 689999999999999999977 99999
Q ss_pred ccCccccc
Q 007541 169 DFGLARVA 176 (599)
Q Consensus 169 DFGlA~~~ 176 (599)
|||.|...
T Consensus 149 Df~qav~~ 156 (188)
T PF01163_consen 149 DFGQAVDS 156 (188)
T ss_dssp -GTTEEET
T ss_pred ecCcceec
Confidence 99998654
No 451
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.90 E-value=8.3e-10 Score=121.97 Aligned_cols=153 Identities=23% Similarity=0.336 Sum_probs=112.0
Q ss_pred hhhhhcccC-ceEeecCCCCcEEeCCCCceeeeccCccccccCCCCCc-cccc-----ccccCccccCccccccccCCCC
Q 007541 137 RGLKYIHTA-NVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTA-IFWT-----DYVATRWYRAPELCGSFFSKYT 209 (599)
Q Consensus 137 ~aL~yLHs~-gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~~~~-~~~t-----~~~gt~~Y~APE~l~~~~~~ys 209 (599)
.|+.|+|.. ++||+.|.|++|.++.++.+||+.|+.+....+...-. ..++ -..-...|.|||++.. ...+
T Consensus 110 dgl~flh~sAk~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~--~~~~ 187 (700)
T KOG2137|consen 110 DGLAFLHRSAKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLG--TTNT 187 (700)
T ss_pred chhhhhccCcceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhcc--cccc
Confidence 899999964 89999999999999999999999999987654322100 0011 1123456999999987 6788
Q ss_pred cchhhHhHHHHHHHHH-hCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHhhhhhhhhcCCCCCcccCCCccchhhhhhh
Q 007541 210 PAIDIWSIGCIFAELL-TGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFF 288 (599)
Q Consensus 210 ~~~DIWSlG~Il~eLl-tG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (599)
.++|++|+||++|.+. .|+.+|.+.+.......-...++
T Consensus 188 ~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~~~~~~~~---------------------------------------- 227 (700)
T KOG2137|consen 188 PASDVFSLGVLIYTIYNGGKSIIAANGGLLSYSFSRNLLN---------------------------------------- 227 (700)
T ss_pred ccccceeeeeEEEEEecCCcchhhccCCcchhhhhhcccc----------------------------------------
Confidence 9999999999999998 67887766543221111000000
Q ss_pred hhHHHHHHhhhcccHHHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccccC
Q 007541 289 FFTEVLILHCQVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKG 360 (599)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL~~DP~~RpTa~e~L~HP~f~~ 360 (599)
......-.++++++++=|.++|..|+..||++.+++..|||.+
T Consensus 228 -----------------------------~~~~~~s~~~p~el~~~l~k~l~~~~~~rp~~~~l~~~~ff~D 270 (700)
T KOG2137|consen 228 -----------------------------AGAFGYSNNLPSELRESLKKLLNGDSAVRPTLDLLLSIPFFSD 270 (700)
T ss_pred -----------------------------cccccccccCcHHHHHHHHHHhcCCcccCcchhhhhcccccCC
Confidence 0001111567889999999999999999999999999999985
No 452
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.69 E-value=6.4e-08 Score=97.11 Aligned_cols=137 Identities=26% Similarity=0.259 Sum_probs=101.2
Q ss_pred ceEEEEEEeecCceEEEEEEECCCCcEEEEEEecC------------cc----cCh----hhHHHHHHHHHHHHhcCCC-
Q 007541 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKIND------------IF----EHV----SDATRILREIKLLRLLRHP- 82 (599)
Q Consensus 24 rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~------------~~----~~~----~~~~~i~rEi~iL~~l~Hp- 82 (599)
-+.+...||-|--|.||.|.+. .|.++|||+=.. .. .+. .......+|..+|..|...
T Consensus 92 ve~iG~~IGvGKEsdVY~~~~~-~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G 170 (304)
T COG0478 92 VEAIGTKIGVGKESDVYVAIDP-KGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEG 170 (304)
T ss_pred HHhhccccccCccceEEEEECC-CCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcC
Confidence 4566789999999999999875 789999995321 00 111 1123457899999988643
Q ss_pred -CccccceeecCCCcCCCccEEEEEecCCc-CHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeC
Q 007541 83 -DIVEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILAN 160 (599)
Q Consensus 83 -nIv~l~~v~~~~s~~~~~~iylV~E~~~g-~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~ 160 (599)
.|.+.+++ +.-++|||+++| .|..+ +++.+.+..++..|++-+..+-..||||+|+.+-|||++
T Consensus 171 ~~VP~P~~~---------nRHaVvMe~ieG~eL~~~-----r~~~en~~~il~~il~~~~~~~~~GiVHGDlSefNIlV~ 236 (304)
T COG0478 171 VKVPKPIAW---------NRHAVVMEYIEGVELYRL-----RLDVENPDEILDKILEEVRKAYRRGIVHGDLSEFNILVT 236 (304)
T ss_pred CCCCCcccc---------ccceeeeehcccceeecc-----cCcccCHHHHHHHHHHHHHHHHHcCccccCCchheEEEe
Confidence 55554443 245799999998 44432 234566677778888888777799999999999999999
Q ss_pred CCCceeeeccCcccc
Q 007541 161 ADCKLKICDFGLARV 175 (599)
Q Consensus 161 ~~~~lKL~DFGlA~~ 175 (599)
.||.+.++||--+..
T Consensus 237 ~dg~~~vIDwPQ~v~ 251 (304)
T COG0478 237 EDGDIVVIDWPQAVP 251 (304)
T ss_pred cCCCEEEEeCccccc
Confidence 999999999987743
No 453
>PRK09902 hypothetical protein; Provisional
Probab=98.56 E-value=5.8e-07 Score=88.15 Aligned_cols=141 Identities=16% Similarity=0.151 Sum_probs=100.2
Q ss_pred eecCceEEEEEEECCCCcEEEEEEecC----cccChhhHHHHHHHHHHHHhcCCCC--ccccceeecCCCcCCCccEEEE
Q 007541 32 GKGSYGVVCSAYDTRTGEKVAIKKIND----IFEHVSDATRILREIKLLRLLRHPD--IVEIKHILLPPSRREFKDIYVV 105 (599)
Q Consensus 32 G~G~~g~V~~a~d~~tg~~vAIK~i~~----~~~~~~~~~~i~rEi~iL~~l~Hpn--Iv~l~~v~~~~s~~~~~~iylV 105 (599)
|+|+-|-|+.... .|+.+=+|.-.. ..........+.+|+..|+.|..-+ +.++. ++..........-+||
T Consensus 27 ~rgG~SgV~r~~~--~g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~rA~LV 103 (216)
T PRK09902 27 RRNGMSGVQCVER--NGKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEWRALLV 103 (216)
T ss_pred CCCCcceEEEEEe--CCcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCceEEEEE
Confidence 4577777887643 344677886541 1111223456889999999886433 33333 1111111123356899
Q ss_pred EecCCc--CHHHHHHhC--CCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCc--eeeeccCcccc
Q 007541 106 FELMES--DLHQVIKAN--DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCK--LKICDFGLARV 175 (599)
Q Consensus 106 ~E~~~g--~L~~~i~~~--~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~--lKL~DFGlA~~ 175 (599)
+|-+++ +|.+++... ...++.....++.+|...|.-||..|+.|+|+-+.|||++.++. ++++||.-++.
T Consensus 104 Te~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r~ 179 (216)
T PRK09902 104 TEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSVNRQHGCCYVRHIYVKTEGKAEAGFLDLEKSRR 179 (216)
T ss_pred EEeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHCCCcCCCCCHhheeecCCCCeeEEEEEhhccch
Confidence 998884 899988664 34577888899999999999999999999999999999987777 99999997764
No 454
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=98.41 E-value=1.7e-06 Score=85.31 Aligned_cols=143 Identities=18% Similarity=0.251 Sum_probs=89.8
Q ss_pred CCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhh-HH------HHHHHHHHHHhcCCCCccccce---ee
Q 007541 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSD-AT------RILREIKLLRLLRHPDIVEIKH---IL 91 (599)
Q Consensus 22 ~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~-~~------~i~rEi~iL~~l~HpnIv~l~~---v~ 91 (599)
.+.|.+.+++-......|.+. ...|+.+++|........... .. ...+++..+..++...+..+.+ +.
T Consensus 30 ~~~~~~~kv~k~~~r~~ValI--ei~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl~~ 107 (229)
T PF06176_consen 30 DNNYKIIKVFKNTKRNYVALI--EIDGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYLAA 107 (229)
T ss_pred hCCceEEEeecCCCccEEEEE--EECCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCccccccceeee
Confidence 678999999988777766665 456899999987542211110 01 1223444444443333333222 22
Q ss_pred cCCCcCCCccEEEEEecCCc-CHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeecc
Q 007541 92 LPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDF 170 (599)
Q Consensus 92 ~~~s~~~~~~iylV~E~~~g-~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DF 170 (599)
.-...+-....+|||||++| .|.++.. ++++ +...|..++.-||+.|++|+|..|.|+++..+ .++++||
T Consensus 108 ekk~~~~~~~~~ll~EYIeG~~l~d~~~----i~e~----~~~ki~~~ikqlH~~G~~HGD~hpgNFlv~~~-~i~iID~ 178 (229)
T PF06176_consen 108 EKKIFRYTSSYVLLMEYIEGVELNDIED----IDED----LAEKIVEAIKQLHKHGFYHGDPHPGNFLVSNN-GIRIIDT 178 (229)
T ss_pred eeeeccceeEEEEEEEEecCeecccchh----cCHH----HHHHHHHHHHHHHHcCCccCCCCcCcEEEECC-cEEEEEC
Confidence 21221222345689999998 5655431 3332 34557778999999999999999999999855 5999999
Q ss_pred Ccccc
Q 007541 171 GLARV 175 (599)
Q Consensus 171 GlA~~ 175 (599)
+..+.
T Consensus 179 ~~k~~ 183 (229)
T PF06176_consen 179 QGKRM 183 (229)
T ss_pred ccccc
Confidence 86653
No 455
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=98.34 E-value=5.1e-06 Score=87.63 Aligned_cols=194 Identities=15% Similarity=0.160 Sum_probs=128.4
Q ss_pred EEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhc-CCCCccccceeecCC----CcCCCcc
Q 007541 27 IEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLL-RHPDIVEIKHILLPP----SRREFKD 101 (599)
Q Consensus 27 i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l-~HpnIv~l~~v~~~~----s~~~~~~ 101 (599)
..+.||+|+-+.+|-.-. -...+.|+....--.. .. .-+..|... .||.+-. .+.++. +.+....
T Consensus 15 ~gr~LgqGgea~ly~l~e---~~d~VAKIYh~Pppa~-~a----qk~a~la~~p~~p~~~~--rvaWPqa~L~G~~~~~~ 84 (637)
T COG4248 15 PGRPLGQGGEADLYTLGE---VRDQVAKIYHAPPPAA-QA----QKVAELAATPDAPLLNY--RVAWPQATLHGGRRGKV 84 (637)
T ss_pred CCccccCCccceeeecch---hhchhheeecCCCchH-HH----HHHHHhccCCCCcchhh--hhcccHHHhhCCCccce
Confidence 457799999999886522 2234557665422111 11 112223332 3654433 111110 1133334
Q ss_pred EEEEEecCCc--CHHHHHHh------CCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCcc
Q 007541 102 IYVVFELMES--DLHQVIKA------NDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLA 173 (599)
Q Consensus 102 iylV~E~~~g--~L~~~i~~------~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA 173 (599)
+-++|+.+.| .++.+... .....++-+.++.+.|..+.+.||..|.+-+|+.++|+||.+++.+.|.|=..-
T Consensus 85 iGflmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~Gh~vGDVn~~~~lVsd~~~V~LVdsDsf 164 (637)
T COG4248 85 IGFLMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEHGHVVGDVNQNSFLVSDDSKVVLVDSDSF 164 (637)
T ss_pred eEEecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhcCCcccccCccceeeecCceEEEEcccce
Confidence 8899999886 45555532 224567888889999999999999999999999999999999999999985543
Q ss_pred ccccCCCCCcccccccccCccccCccccc-cccC--CCCcchhhHhHHHHHHHHHhC-CCCCCCC
Q 007541 174 RVAFNDTPTAIFWTDYVATRWYRAPELCG-SFFS--KYTPAIDIWSIGCIFAELLTG-KPLFPGK 234 (599)
Q Consensus 174 ~~~~~~~~~~~~~t~~~gt~~Y~APE~l~-~~~~--~ys~~~DIWSlG~Il~eLltG-~~pF~g~ 234 (599)
.... ..+.+...+|...|.+||+-. ..+. .-+...|.|.||+++|+||.| +.||.|-
T Consensus 165 qi~~----ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI 225 (637)
T COG4248 165 QINA----NGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGI 225 (637)
T ss_pred eecc----CCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcc
Confidence 3322 223345568999999999743 1112 235578999999999999987 8999874
No 456
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=98.31 E-value=3.4e-06 Score=84.08 Aligned_cols=137 Identities=20% Similarity=0.174 Sum_probs=92.3
Q ss_pred EEEEeecCceEEEEEEECCCCcEEEEEEecCcccChh-----------------hHHH-----HHHHHHHHHhcC--CCC
Q 007541 28 EEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVS-----------------DATR-----ILREIKLLRLLR--HPD 83 (599)
Q Consensus 28 ~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~-----------------~~~~-----i~rEi~iL~~l~--Hpn 83 (599)
...|+.|--+.||+|.. ..+..||+|+++.....-. +... ..+|..-|+++. +-.
T Consensus 53 ~g~istGKEA~Vy~a~~-~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL~R~~eAGVr 131 (268)
T COG1718 53 VGCISTGKEANVYLAET-GDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLKRAYEAGVR 131 (268)
T ss_pred EeeecCCcceEEEeecc-CCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 34666777789999964 5689999999853111000 1111 234666666664 333
Q ss_pred ccccceeecCCCcCCCccEEEEEecCCcCH--HHHHHhCCCCCHHHHHHHHHHHHhhhhhccc-CceEeecCCCCcEEeC
Q 007541 84 IVEIKHILLPPSRREFKDIYVVFELMESDL--HQVIKANDDLTPEHYQFFLYQLLRGLKYIHT-ANVFHRDLKPKNILAN 160 (599)
Q Consensus 84 Iv~l~~v~~~~s~~~~~~iylV~E~~~g~L--~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs-~gIvHrDLKP~NILv~ 160 (599)
+.+-+.+. +-.||||+++.+- .-.++. -.+..+++..+..++++.+.-|-. +|+||+||+.-|||+.
T Consensus 132 vP~Pi~~~---------~nVLvMEfIg~~g~pAP~LkD-v~~e~~e~~~~~~~~v~~~~~l~~~a~LVHgDLSEyNiL~~ 201 (268)
T COG1718 132 VPEPIAFR---------NNVLVMEFIGDDGLPAPRLKD-VPLELEEAEGLYEDVVEYMRRLYKEAGLVHGDLSEYNILVH 201 (268)
T ss_pred CCCceeec---------CCeEEEEeccCCCCCCCCccc-CCcCchhHHHHHHHHHHHHHHHHHhcCcccccchhhheEEE
Confidence 44444433 3479999999541 111111 134445788889999999998877 9999999999999999
Q ss_pred CCCceeeeccCccccc
Q 007541 161 ADCKLKICDFGLARVA 176 (599)
Q Consensus 161 ~~~~lKL~DFGlA~~~ 176 (599)
++.+.|+|||-|...
T Consensus 202 -~~~p~iID~~QaV~~ 216 (268)
T COG1718 202 -DGEPYIIDVSQAVTI 216 (268)
T ss_pred -CCeEEEEECcccccc
Confidence 889999999988654
No 457
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=98.20 E-value=5.8e-06 Score=96.55 Aligned_cols=155 Identities=18% Similarity=0.234 Sum_probs=109.8
Q ss_pred HHHHHHHHhcCCCCccccceeecCCCcCCCccEEEEEecCCc-CHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceE
Q 007541 70 LREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVF 148 (599)
Q Consensus 70 ~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~iylV~E~~~g-~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIv 148 (599)
.-|+..+..+.|+|++.++.+-...-..+ -.+.+..+++.. ++.+.+..-+.++.+..+.+..++++||.|+|+....
T Consensus 230 E~e~~~l~k~~~~n~~~~~~~~le~~~~g-~~~~v~~~~~s~~~~~~~~q~v~~i~~~~~r~~~~~~~~GL~~~h~~~l~ 308 (1351)
T KOG1035|consen 230 EIELESLSKIAHDNLGGYFVYGLERLFRG-IVLDVLQEICSKVELRSLLQSVGSIPLETLRILHQKLLEGLAYLHSLSLE 308 (1351)
T ss_pred HHHHHHHHhhccccccceeEEeehhhcch-HHHHHHHhhcCccchHHHHhhccccCHHHHHHHHHHHhhhHHHHHHhccc
Confidence 34666688889999999988765432211 133445577774 8999998888999999999999999999999999777
Q ss_pred eecCCCC---cEEeCCCCceeee--ccCccccccCCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHH
Q 007541 149 HRDLKPK---NILANADCKLKIC--DFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAE 223 (599)
Q Consensus 149 HrDLKP~---NILv~~~~~lKL~--DFGlA~~~~~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~e 223 (599)
|.-|.-. +-.++.++.+.++ ||+.+........ ......+.-+.++|.............|+|.+|..+..
T Consensus 309 ~v~L~~s~~~~~~~~~e~~~~~sl~~~~ss~~l~d~~~----~~~~~~~~~~~~~e~~~~~~~~~~r~~dL~~lgll~~~ 384 (1351)
T KOG1035|consen 309 HVVLSASSSKESTVDGEGVVAISLSDFDSSKPLPDNEK----SFSDLLAEIRNADEDLKENTAKKSRLTDLWCLGLLLLQ 384 (1351)
T ss_pred eeEEecccccccccCccceeecchhhhcccccCCCccc----chhhcCccccccccccccccchhhhhhHHHHHHHHHhh
Confidence 7666555 4455667777777 8888865432221 12234455677888775522233344799999999999
Q ss_pred HHhCCC
Q 007541 224 LLTGKP 229 (599)
Q Consensus 224 LltG~~ 229 (599)
+..|..
T Consensus 385 ~~~~~~ 390 (1351)
T KOG1035|consen 385 LSQGED 390 (1351)
T ss_pred hhhcCc
Confidence 988763
No 458
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=98.18 E-value=5.8e-06 Score=91.74 Aligned_cols=135 Identities=24% Similarity=0.331 Sum_probs=87.3
Q ss_pred EEEeecCceEEEEEEECCCCcEEEEEEecCcccChhh--------------------------------HHH------HH
Q 007541 29 EVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSD--------------------------------ATR------IL 70 (599)
Q Consensus 29 ~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~--------------------------------~~~------i~ 70 (599)
..|+.+|-|.||+|+-+ +|+.||||+........-. .++ +.
T Consensus 131 ~PiAsASIaQVH~A~L~-sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~ 209 (517)
T COG0661 131 EPIASASIAQVHRAVLK-SGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYR 209 (517)
T ss_pred CchhhhhHhhheeEEec-CCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHH
Confidence 67999999999999864 5999999988531111000 011 12
Q ss_pred HHHHHHHhc----CCCCccccceeecCCCcCCCccEEEEEecCCc-CHHHH--HHhCCCCC-----HHHHHHHHHHHHhh
Q 007541 71 REIKLLRLL----RHPDIVEIKHILLPPSRREFKDIYVVFELMES-DLHQV--IKANDDLT-----PEHYQFFLYQLLRG 138 (599)
Q Consensus 71 rEi~iL~~l----~HpnIv~l~~v~~~~s~~~~~~iylV~E~~~g-~L~~~--i~~~~~ls-----e~~i~~i~~QLl~a 138 (599)
+|..-+.++ +...-+++-.+|+.-+ +.-.|+|||++| .+.++ +++. +++ +.-++.++.|+++
T Consensus 210 ~EA~n~~~~~~nf~~~~~v~VP~V~we~t----~~~VLtmE~i~Gi~i~d~~~l~~~-g~d~k~ia~~~~~~f~~q~~~- 283 (517)
T COG0661 210 REAANAERFRENFKDDPDVYVPKVYWEYT----TRRVLTMEWIDGIKISDIAALKSA-GIDRKELAELLVRAFLRQLLR- 283 (517)
T ss_pred HHHHHHHHHHHHcCCCCCeEeceeehhcc----CCcEEEEEeeCCEecccHHHHHhc-CCCHHHHHHHHHHHHHHHHHh-
Confidence 233333333 2223334444553322 234799999998 55555 4443 344 4445555555554
Q ss_pred hhhcccCceEeecCCCCcEEeCCCCceeeeccCccccc
Q 007541 139 LKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVA 176 (599)
Q Consensus 139 L~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~ 176 (599)
.|++|.|..|-||+++.+|++-+.|||.....
T Consensus 284 ------dgffHaDpHpGNi~v~~~g~i~~lDfGi~g~l 315 (517)
T COG0661 284 ------DGFFHADPHPGNILVRSDGRIVLLDFGIVGRL 315 (517)
T ss_pred ------cCccccCCCccceEEecCCcEEEEcCcceecC
Confidence 69999999999999999999999999988654
No 459
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=98.17 E-value=1.6e-05 Score=78.16 Aligned_cols=139 Identities=20% Similarity=0.213 Sum_probs=79.7
Q ss_pred EEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCC--ccccceeecCCCcCCCccEEEE
Q 007541 28 EEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPD--IVEIKHILLPPSRREFKDIYVV 105 (599)
Q Consensus 28 ~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~Hpn--Iv~l~~v~~~~s~~~~~~iylV 105 (599)
++.|+.|..+.||+..... ..+++|+.... .....+.+|..+++.|.... +.+++...... ......+++
T Consensus 2 i~~l~~G~~n~~~~v~~~~--~~~vlK~~~~~----~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~--~~~~~~~~~ 73 (239)
T PF01636_consen 2 IRPLSGGFSNRVYRVTTDD--GRYVLKFYRPP----DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSD--EFNGFPYLL 73 (239)
T ss_dssp EEEEEESSSSEEEEEEETT--SEEEEEEESSH----HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEET--EETSEEEEE
T ss_pred CccCCCCCeeeEEEEEECC--cEEEEEEeCCC----CCHHHHHHHHHHHHHHHhcCCCCceEEeecccc--cccccceEE
Confidence 5789999999999997654 58999986532 34567789999999886433 34554432111 222347999
Q ss_pred EecCCc-CHHH----------------HHH---hC----CCCCHHH------HHHH---------------HHHHHh-hh
Q 007541 106 FELMES-DLHQ----------------VIK---AN----DDLTPEH------YQFF---------------LYQLLR-GL 139 (599)
Q Consensus 106 ~E~~~g-~L~~----------------~i~---~~----~~lse~~------i~~i---------------~~QLl~-aL 139 (599)
|++++| .+.. .+. .. ..+.... ...+ ...+.. .+
T Consensus 74 ~~~i~g~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (239)
T PF01636_consen 74 MEYIPGRPLDDELSPEQRPELLRQLGRALAQLHQVPPPFSPFADWPEWRLEFLRQLESWTARLRASELFDDLEELEERLL 153 (239)
T ss_dssp EEEESSEEHHHTSTHHHHHHHHHHHHHHHHHHHHSHTTCCCHTHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
T ss_pred EEEeccccccccccccccccccccchhhhhhcccccccccccccccccccccccccccccccccchhhhhhhHHHHHHHH
Confidence 999997 4444 111 11 0111000 0000 001111 22
Q ss_pred hhc-------ccCceEeecCCCCcEEeC-CCCceeeeccCccc
Q 007541 140 KYI-------HTANVFHRDLKPKNILAN-ADCKLKICDFGLAR 174 (599)
Q Consensus 140 ~yL-------Hs~gIvHrDLKP~NILv~-~~~~lKL~DFGlA~ 174 (599)
..+ ....++|+|+.|.|||++ .++.+-|+||+.+.
T Consensus 154 ~~~~~~~~~~~~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~ 196 (239)
T PF01636_consen 154 QELEALLPKPLPPVLIHGDLHPGNILVDPSDGRIGIIDFEDAG 196 (239)
T ss_dssp HHHHHHHHCCSCEEEE-SS-SGGGEEEESSTTEEEE--GTT-E
T ss_pred HHHHhhhccCCCcEEEEeccccccceeeeccceeEEEecccce
Confidence 222 245699999999999999 66777899999774
No 460
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=98.15 E-value=1.9e-05 Score=78.98 Aligned_cols=130 Identities=17% Similarity=0.191 Sum_probs=78.7
Q ss_pred EEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCC--ccccceeecCCCcCCCccEEEEE
Q 007541 29 EVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPD--IVEIKHILLPPSRREFKDIYVVF 106 (599)
Q Consensus 29 ~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~Hpn--Iv~l~~v~~~~s~~~~~~iylV~ 106 (599)
..||+|..+.||+. .|..+++|..... .....+.+|..+|+.+..-. +.+.+++... .....+||
T Consensus 7 ~~i~~G~t~~~y~~----~~~~~VlR~~~~~----~~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~-----~~~~glv~ 73 (226)
T TIGR02172 7 TQTGEGGNGESYTH----KTGKWMLKLYNPG----FDKETIKREFDASRKVFSLGIPTPHPFDLVED-----GGRLGLIY 73 (226)
T ss_pred eeecCCCCcceeEe----cCCCEEEEeCCCC----CCHHHHHHHHHHHHHHHHcCCCCCceEEEEec-----CCeeeeee
Confidence 56899999999984 2556788876532 23345689999999886433 3455555422 23467899
Q ss_pred ecCCcC--HH--------------HHH-------HhC--CCCCHH------------------HHHHHHHHHHhhhhhcc
Q 007541 107 ELMESD--LH--------------QVI-------KAN--DDLTPE------------------HYQFFLYQLLRGLKYIH 143 (599)
Q Consensus 107 E~~~g~--L~--------------~~i-------~~~--~~lse~------------------~i~~i~~QLl~aL~yLH 143 (599)
|+++|. +. ..+ ..- ...... .++..+...+..+. -
T Consensus 74 e~i~G~~~~~~~~~~~~~~~~~l~~~la~~l~~lH~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~--~ 151 (226)
T TIGR02172 74 ELIVGKRSFSRIISDNPSRLEEIAKIFAEMAKKLHSTKCDTSTFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKEVP--D 151 (226)
T ss_pred eecCCccchhhhhcCCHHHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhCC--C
Confidence 999983 11 111 110 011110 11111111111111 1
Q ss_pred cCceEeecCCCCcEEeCCCCceeeeccCccc
Q 007541 144 TANVFHRDLKPKNILANADCKLKICDFGLAR 174 (599)
Q Consensus 144 s~gIvHrDLKP~NILv~~~~~lKL~DFGlA~ 174 (599)
...++|+|+.|.||+++.++ +.|+||+.+.
T Consensus 152 ~~~~~HgD~~~~Nii~~~~~-~~iIDwe~a~ 181 (226)
T TIGR02172 152 TSTCLHGDFQIGNLITSGKG-TYWIDLGDFG 181 (226)
T ss_pred CCceEecCCCCCcEEEcCCC-cEEEechhcC
Confidence 22479999999999999888 9999999874
No 461
>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2
Probab=98.07 E-value=1.8e-05 Score=77.12 Aligned_cols=133 Identities=26% Similarity=0.329 Sum_probs=92.5
Q ss_pred CCceEEEEEEeecCc-eEEEEEEECCCCcEEEEEEecC---c--------cc-Ch-------hhHHHHHHHHHHHH---h
Q 007541 22 GSRYKIEEVIGKGSY-GVVCSAYDTRTGEKVAIKKIND---I--------FE-HV-------SDATRILREIKLLR---L 78 (599)
Q Consensus 22 ~~rY~i~~~LG~G~~-g~V~~a~d~~tg~~vAIK~i~~---~--------~~-~~-------~~~~~i~rEi~iL~---~ 78 (599)
+..++.++.||.|.- |.||++. ..|+.||||++.. . +. .. .....+..|.+..- .
T Consensus 36 ~~~I~flefLg~g~~~~~V~kv~--I~g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke 113 (207)
T PF13095_consen 36 GDDIEFLEFLGHGSHDGYVFKVE--IDGRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKE 113 (207)
T ss_pred CCcEeeeeecCCCCceeEEEEEE--ECCeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHh
Confidence 389999999999999 9999995 5688999999421 0 00 00 11235667777644 4
Q ss_pred cCCCCc--cccceeecCCC-------------cCCCccEEEEEecCCcCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcc
Q 007541 79 LRHPDI--VEIKHILLPPS-------------RREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIH 143 (599)
Q Consensus 79 l~HpnI--v~l~~v~~~~s-------------~~~~~~iylV~E~~~g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLH 143 (599)
+.+.++ |++++++.-.. ........||.||+...- .++..+ +.+|++-|..+|
T Consensus 114 ~~~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~--------~~~~~~----~~~~~~dl~~~~ 181 (207)
T PF13095_consen 114 AGREGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP--------PLQIRD----IPQMLRDLKILH 181 (207)
T ss_pred ccccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc--------ccchhH----HHHHHHHHHHHH
Confidence 456677 88888874321 011223568888777533 233333 567788888999
Q ss_pred cCceEeecCCCCcEEeCCCCceeeeccCcc
Q 007541 144 TANVFHRDLKPKNILANADCKLKICDFGLA 173 (599)
Q Consensus 144 s~gIvHrDLKP~NILv~~~~~lKL~DFGlA 173 (599)
..||+-+|+++.|.. .-||+|||.+
T Consensus 182 k~gI~~~Dv~~~ny~-----~G~lvDfs~~ 206 (207)
T PF13095_consen 182 KLGIVPRDVKPRNYR-----GGKLVDFSSS 206 (207)
T ss_pred HCCeeeccCcccccc-----CCEEEecccC
Confidence 999999999999975 3589999975
No 462
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=97.87 E-value=2.5e-06 Score=94.05 Aligned_cols=187 Identities=16% Similarity=0.122 Sum_probs=134.6
Q ss_pred CCCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCC-ccccceeecCCCcCCC
Q 007541 21 EGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPD-IVEIKHILLPPSRREF 99 (599)
Q Consensus 21 ~~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~Hpn-Iv~l~~v~~~~s~~~~ 99 (599)
....|...+.+++|+++.+++.+...+...+ .+++... ..+.-++.+|.+++||| .+..++ +.+.+
T Consensus 240 k~kws~~fh~fvK~altknpKkRptaeklL~-h~fvs~~-------l~~rl~~eLLdK~n~P~~~v~~~~-----d~~~E 306 (829)
T KOG0576|consen 240 KTKWSEFFHNFVKGALTKNPKKRPTAEKLLQ-HPFVSQT-------LSRRLAIELLDKVNNPNPVVRYLE-----DYDGE 306 (829)
T ss_pred CccchHHHHHHHHHHhcCCCccCCChhhhee-ceeeccc-------hhhHHHHHHHHHccCCCCcccccc-----cCCcc
Confidence 3455667778889999999999988877766 7777532 22335788999999999 443332 33555
Q ss_pred ccEEEEEecCCcC--HHHHH-HhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCCCCceeeeccCccccc
Q 007541 100 KDIYVVFELMESD--LHQVI-KANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVA 176 (599)
Q Consensus 100 ~~iylV~E~~~g~--L~~~i-~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~ 176 (599)
....++++++.+. -...+ .+.-.+.+-+...+++--+++|+++|+.-=+|+| |||..+ +..|..||+.....
T Consensus 307 ~~~~i~~~i~s~~rs~~~~~~~se~~~~~~~~~~~~r~et~~l~~l~~~~~~~~d----~~l~s~-~~~~~~~~~v~~~L 381 (829)
T KOG0576|consen 307 DYLWIPMRICSTGRSSALEMTVSEIALEQYQFAYPLRKETRPLAELHSSYKVHRD----NILGSE-EEVKLLDFAVPPQL 381 (829)
T ss_pred cccchhhhhhcCCccccccCChhhHhhhhhhhhhhhhhhcccccccccccccCcc----cccccc-cccccccccCCccc
Confidence 6789999999853 11111 1111344455666777778999999998778998 777654 78999999988765
Q ss_pred cCCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHHHHhCCCCC
Q 007541 177 FNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLF 231 (599)
Q Consensus 177 ~~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~eLltG~~pF 231 (599)
.... .-+...+++.++|||+... ..+....|.|++|.--.+|--|-+|-
T Consensus 382 ~~~~----~~~t~~~~~~~~~pev~~~--~~~~~~p~~~~~~~~~~~~ap~~pPr 430 (829)
T KOG0576|consen 382 TRTM----KPRTAIGTPEPLAPEVIQE--NTIDGCPDSGSLAVSAIQMAPGLPPR 430 (829)
T ss_pred Cccc----ccccCCCCCCCCCchhhcc--cccccCCCccCCCcchhhcCCCCCCC
Confidence 3322 1245688999999999877 68889999999998777777776654
No 463
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=97.82 E-value=0.00012 Score=73.67 Aligned_cols=132 Identities=14% Similarity=0.076 Sum_probs=76.2
Q ss_pred EeecCc-eEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcC-CCCccccceeecCCCcCCCccEEEEEec
Q 007541 31 IGKGSY-GVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLR-HPDIVEIKHILLPPSRREFKDIYVVFEL 108 (599)
Q Consensus 31 LG~G~~-g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~-HpnIv~l~~v~~~~s~~~~~~iylV~E~ 108 (599)
|..|.+ ..||+... .+..+.||+..... ...+.+|+.+++.+. +--+.+++...... ..-++|||+
T Consensus 6 ~~~g~~~~~v~~~~~--~~~~~~vk~~~~~~-----~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~-----~~~~lv~e~ 73 (244)
T cd05150 6 VTEGQSGATVYRLDG--KNPGLYLKIAPSGP-----TYELEREAERLRWLAGKLPVPEVIDYGSDD-----GRAWLLTSA 73 (244)
T ss_pred cCCCCCcCeEEEEcC--CCCcEEEEecCCCc-----ccchHHHHHHHHHHHhcCCCCeEEEEEecC-----CccEEEEEe
Confidence 444544 78898854 34678888765321 334668999998885 43344555554221 346899999
Q ss_pred CCc-CHHHH----------------HH---hCC----CCCH---HHHHHH----------------------HHHHHhhh
Q 007541 109 MES-DLHQV----------------IK---AND----DLTP---EHYQFF----------------------LYQLLRGL 139 (599)
Q Consensus 109 ~~g-~L~~~----------------i~---~~~----~lse---~~i~~i----------------------~~QLl~aL 139 (599)
++| .|.+. +. .-. .+.. ...... ..+++..|
T Consensus 74 i~G~~l~~~~~~~~~~~~~~~l~~~l~~lH~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 153 (244)
T cd05150 74 VPGVPAAALWEELEPERLVDALAEALRRLHALPVADCPFDRRLDRRLAEARARVENGLVDEDDFDDERRGWSAEELYAEL 153 (244)
T ss_pred eCCccHhHhhcccCHHHHHHHHHHHHHHHhcCCcccCCcchhHHHHHHHHHHHHhcCCcChhhCcHhhcCCCHHHHHHHH
Confidence 987 33322 11 000 1110 000000 11112211
Q ss_pred hh----cccCceEeecCCCCcEEeCCCCceeeeccCccc
Q 007541 140 KY----IHTANVFHRDLKPKNILANADCKLKICDFGLAR 174 (599)
Q Consensus 140 ~y----LHs~gIvHrDLKP~NILv~~~~~lKL~DFGlA~ 174 (599)
.. .....++|+|+.|.|||++.++.+.|+||+.|.
T Consensus 154 ~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~iIDwe~a~ 192 (244)
T cd05150 154 EATRPAEEDLVVTHGDACLPNIIVDPGKFSGFIDLGRLG 192 (244)
T ss_pred HhhCCCcCceEEECCCCCCccEEEeCCcEEEEEEccccc
Confidence 11 123459999999999999998778999999774
No 464
>PLN02876 acyl-CoA dehydrogenase
Probab=97.77 E-value=0.0002 Score=84.95 Aligned_cols=83 Identities=17% Similarity=0.214 Sum_probs=55.2
Q ss_pred EEEEEeecCceEEEEEEECCCC--cEEEEEEecCcccChhhHHHHHHHHHHHHhcC-CCCc--cccceeecCCCcCCCcc
Q 007541 27 IEEVIGKGSYGVVCSAYDTRTG--EKVAIKKINDIFEHVSDATRILREIKLLRLLR-HPDI--VEIKHILLPPSRREFKD 101 (599)
Q Consensus 27 i~~~LG~G~~g~V~~a~d~~tg--~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~-HpnI--v~l~~v~~~~s~~~~~~ 101 (599)
-++.|+.|.+..+|+......+ ..+++|+...... ......+.+|..+|+.|. |.+| .+++.++.+. .....
T Consensus 42 ~v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~-~~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~--~v~G~ 118 (822)
T PLN02876 42 KVSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKL-LQSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDA--SVIGT 118 (822)
T ss_pred eEEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCcc-CccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCC--CcCCC
Confidence 3677899999999998654432 4678887643211 123446779999999996 6664 5555555332 12235
Q ss_pred EEEEEecCCcC
Q 007541 102 IYVVFELMESD 112 (599)
Q Consensus 102 iylV~E~~~g~ 112 (599)
.|+||||++|.
T Consensus 119 ~flVME~v~G~ 129 (822)
T PLN02876 119 AFYIMEYLEGR 129 (822)
T ss_pred ceEEEEecCCc
Confidence 78999999974
No 465
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=97.67 E-value=0.00014 Score=69.13 Aligned_cols=135 Identities=20% Similarity=0.258 Sum_probs=89.7
Q ss_pred CCCCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCC
Q 007541 20 GEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREF 99 (599)
Q Consensus 20 ~~~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~ 99 (599)
.....-.+.+.|++|.+|+||++.. .|..+|+|+=. ..+....+..|.++|..++-.++..=+-.+
T Consensus 19 ~~~~~~~v~~~L~KG~~s~Vyl~~~--~~~~~a~Kvrr----~ds~r~~l~kEakiLeil~g~~~~p~vy~y-------- 84 (201)
T COG2112 19 EGKYELRVEKELAKGTTSVVYLGEW--RGGEVALKVRR----RDSPRRNLEKEAKILEILAGEGVTPEVYFY-------- 84 (201)
T ss_pred ccchhhhhhhhhhcccccEEEEeec--cCceEEEEEec----CCcchhhHHHHHHHHHHhhhcCCCceEEEe--------
Confidence 3334446678999999999999965 57799999753 233445677899999988866555432222
Q ss_pred ccEEEEEecCCc-CHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCC-CCcEEeCCCCceeeeccCcccc
Q 007541 100 KDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLK-PKNILANADCKLKICDFGLARV 175 (599)
Q Consensus 100 ~~iylV~E~~~g-~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLK-P~NILv~~~~~lKL~DFGlA~~ 175 (599)
...++.|||+.| .|...-... +..+ +..+++.---|-..||-|..|. |..+++-.++.+.|+||..|..
T Consensus 85 g~~~i~me~i~G~~L~~~~~~~---~rk~----l~~vlE~a~~LD~~GI~H~El~~~~k~vlv~~~~~~iIDFd~At~ 155 (201)
T COG2112 85 GEDFIRMEYIDGRPLGKLEIGG---DRKH----LLRVLEKAYKLDRLGIEHGELSRPWKNVLVNDRDVYIIDFDSATF 155 (201)
T ss_pred chhhhhhhhhcCcchhhhhhcc---cHHH----HHHHHHHHHHHHHhccchhhhcCCceeEEecCCcEEEEEccchhh
Confidence 123466999998 666654321 2233 3345555445677799999886 4444444455999999999974
No 466
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members. The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista
Probab=97.64 E-value=0.00028 Score=70.76 Aligned_cols=31 Identities=32% Similarity=0.468 Sum_probs=26.2
Q ss_pred cCceEeecCCCCcEEeCCCCceeeeccCccc
Q 007541 144 TANVFHRDLKPKNILANADCKLKICDFGLAR 174 (599)
Q Consensus 144 s~gIvHrDLKP~NILv~~~~~lKL~DFGlA~ 174 (599)
..+++|+|+.|.|||++.++..-|+||+.+.
T Consensus 163 ~~~l~HGD~~~~Nvlv~~~~i~giIDw~~a~ 193 (235)
T cd05155 163 PPVWFHGDLAPGNLLVQDGRLSAVIDFGCLG 193 (235)
T ss_pred CceEEeCCCCCCcEEEECCCEEEEEeCcccC
Confidence 4469999999999999876656799999874
No 467
>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]
Probab=97.63 E-value=0.00028 Score=76.71 Aligned_cols=177 Identities=26% Similarity=0.356 Sum_probs=117.5
Q ss_pred hhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEEEEEecCCcCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcc
Q 007541 64 SDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIH 143 (599)
Q Consensus 64 ~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~iylV~E~~~g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLH 143 (599)
.....++--..+++.+.|+|....+++-.... ....+|+|+++.+|.+++..+. +-... ++
T Consensus 24 ~~s~~ilgr~~~lktl~~~~l~~yl~~~r~~~----~r~IVV~e~~~~Sled~~~~~~-l~~~s-------~~------- 84 (725)
T KOG1093|consen 24 PNSIQILGRFQYLKSLQHDNLCQYLDFSRGKH----ERVIVVMEHYTMSLEDILKTGN-LKDES-------LL------- 84 (725)
T ss_pred CcHHHHhhhhHHHHhhcCccceeeEeeecCcc----ceEEEEehhhccchHHHHHhcc-cchhh-------hc-------
Confidence 34556777888999999999999888764332 2388999999999999988764 21111 11
Q ss_pred cCceEeecCCCCcEEeCCCCceeeeccCccccccCCCCCcccccccccCccccCccccccccCCCCcchhhHhHHHHHHH
Q 007541 144 TANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAE 223 (599)
Q Consensus 144 s~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~Il~e 223 (599)
.+|+.|- | .++++| -++ +.+ |- ...+++||||+|.|+.+
T Consensus 85 ~~~~~~~-----~-------~~~~td-~~~-------------t~~--------~~-------~~~pKsdVwsl~~i~~e 123 (725)
T KOG1093|consen 85 AHGVLHL-----N-------IIYITD-HFL-------------TKY--------PS-------PIGPKSDVWSLGFIILE 123 (725)
T ss_pred cccccee-----h-------hhhccc-ccc-------------ccC--------CC-------CCCcchhhhhHHHHHHH
Confidence 2222221 2 233444 000 100 11 11259999999999999
Q ss_pred HHhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHHhhhhhhhhcCCCCCcccCCCccchhhhhhhhhHHHHHHhhhcccH
Q 007541 224 LLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVCLLLNIIWCGYDGFMCSVAPSCFLVFAIFFFFTEVLILHCQVRNE 303 (599)
Q Consensus 224 LltG~~pF~g~~~~~~l~~I~~~lG~p~~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (599)
+..|..++......+++..|.+..-.+.....-. | +
T Consensus 124 l~L~~~l~~~~~~s~~l~~i~k~~~~d~~~~~~a-~-------------------------------------------e 159 (725)
T KOG1093|consen 124 LYLGISLEAELTESEYLEILLKYYTDDQELLSTA-M-------------------------------------------E 159 (725)
T ss_pred HHHhhHHHHHHHHHHHHHHHHHhccCchhHHHHH-H-------------------------------------------H
Confidence 9999999998888888887776554333221111 0 0
Q ss_pred HHHHHHHhcccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccccCc
Q 007541 304 KARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGL 361 (599)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~s~~a~dLL~~mL~~DP~~RpTa~e~L~HP~f~~~ 361 (599)
. .+ .-.++...++++.+|+-..|..||...++..|+-|...
T Consensus 160 ~--~~---------------~~~~d~~~~~~~~~c~~~~~~ir~l~~~~~k~~i~~ev 200 (725)
T KOG1093|consen 160 H--LI---------------QLLADKKRLPLLKKCLWLEPIIRPLPMELSKRCSFTEV 200 (725)
T ss_pred H--HH---------------HHhhhHhHHHHhccCCccccccccchhHHhcCccHHHH
Confidence 0 00 01234557899999999999999999999999999865
No 468
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=97.63 E-value=0.0005 Score=76.47 Aligned_cols=139 Identities=24% Similarity=0.307 Sum_probs=85.3
Q ss_pred EEEeecCceEEEEEEECCCCcEEEEEEecCcccChh-----------------------------hHHHHHHHHHHHH--
Q 007541 29 EVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVS-----------------------------DATRILREIKLLR-- 77 (599)
Q Consensus 29 ~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~-----------------------------~~~~i~rEi~iL~-- 77 (599)
+.||.-+.|.|++|+-+. |+.||||+=+....... -.+.+..|+..++
T Consensus 167 ~piaaASlaQVhrA~L~~-G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~EA 245 (538)
T KOG1235|consen 167 EPIAAASLAQVHRARLKN-GEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTKEA 245 (538)
T ss_pred chhhhcchhheEEEEecC-CCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHHHH
Confidence 679999999999999765 99999997643211110 0112223333322
Q ss_pred --------hcCCCC---ccccceeecCCCcCCCccEEEEEecCCc----CHHHHHHhCCCCCHHHHHHHHHHHHhhhhhc
Q 007541 78 --------LLRHPD---IVEIKHILLPPSRREFKDIYVVFELMES----DLHQVIKANDDLTPEHYQFFLYQLLRGLKYI 142 (599)
Q Consensus 78 --------~l~Hpn---Iv~l~~v~~~~s~~~~~~iylV~E~~~g----~L~~~i~~~~~lse~~i~~i~~QLl~aL~yL 142 (599)
.+.|-+ -|.+-.||++-+ ..-.|+||||+| || +.|.+.+ ++...+..-+.+...- -|
T Consensus 246 ~Nae~~~~~f~~~~~~~~V~VP~Vy~~~s----t~RVLtME~~~G~~i~Dl-~~i~~~g-i~~~~i~~~l~~~~~~--qI 317 (538)
T KOG1235|consen 246 KNAERFRENFKDFSLLTYVLVPKVYWDLS----TKRVLTMEYVDGIKINDL-DAIDKRG-ISPHDILNKLVEAYLE--QI 317 (538)
T ss_pred HhHHHHHHHHHhcccccceeCCeehhhcC----cceEEEEEecCCccCCCH-HHHHHcC-CCHHHHHHHHHHHHHH--HH
Confidence 223334 222444444332 245899999997 45 5566654 5544333322222211 12
Q ss_pred ccCceEeecCCCCcEEeCC----CCceeeeccCccccc
Q 007541 143 HTANVFHRDLKPKNILANA----DCKLKICDFGLARVA 176 (599)
Q Consensus 143 Hs~gIvHrDLKP~NILv~~----~~~lKL~DFGlA~~~ 176 (599)
=..|++|+|=.|-|||++. ++.+.+-|||+....
T Consensus 318 f~~GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~i 355 (538)
T KOG1235|consen 318 FKTGFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVI 355 (538)
T ss_pred HhcCCccCCCCCCcEEEecCCCCCccEEEEcccccccc
Confidence 2368999999999999994 678999999998754
No 469
>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP. PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].
Probab=97.59 E-value=0.00065 Score=66.53 Aligned_cols=128 Identities=20% Similarity=0.261 Sum_probs=89.0
Q ss_pred EEEeecCceEEEEEEECCCCcEEEEEEecCcc--------------cChhhHHHHHHHHHHHHhcC------CCCccccc
Q 007541 29 EVIGKGSYGVVCSAYDTRTGEKVAIKKINDIF--------------EHVSDATRILREIKLLRLLR------HPDIVEIK 88 (599)
Q Consensus 29 ~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~--------------~~~~~~~~i~rEi~iL~~l~------HpnIv~l~ 88 (599)
..||+|+.-.||.- .......||++.... ..........+|+.....+. +.+|.+++
T Consensus 7 ~~i~~G~~R~cy~H---P~dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~~ 83 (199)
T PF10707_consen 7 DLIAQGGERDCYQH---PDDPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRFY 83 (199)
T ss_pred cccccCCCceEEEC---CCCCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccEe
Confidence 46899999888854 345556799887533 11122455667777766665 77899999
Q ss_pred eeecCCCcCCCccEEEEEecCC---c----CHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEEeCC
Q 007541 89 HILLPPSRREFKDIYVVFELME---S----DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANA 161 (599)
Q Consensus 89 ~v~~~~s~~~~~~iylV~E~~~---g----~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NILv~~ 161 (599)
++..+. ..+-+|+|.+. | +|.++++.. .+++ .+. ..|-+-.+||-..+|+.+||+|.||++..
T Consensus 84 G~veT~-----~G~Glv~e~I~d~dG~~s~TL~~~l~~~-~~~~-~~~---~~L~~f~~~l~~~~Iv~~dl~~~NIv~~~ 153 (199)
T PF10707_consen 84 GFVETN-----LGLGLVVELIRDADGNISPTLEDYLKEG-GLTE-ELR---QALDEFKRYLLDHHIVIRDLNPHNIVVQR 153 (199)
T ss_pred EEEecC-----CceEEEEEEEECCCCCcCccHHHHHHcC-CccH-HHH---HHHHHHHHHHHHcCCeecCCCcccEEEEe
Confidence 998544 45788888865 2 688888654 4666 333 33444556778889999999999999865
Q ss_pred CC----ceeeec
Q 007541 162 DC----KLKICD 169 (599)
Q Consensus 162 ~~----~lKL~D 169 (599)
+. .+.|+|
T Consensus 154 ~~~~~~~lvlID 165 (199)
T PF10707_consen 154 RDSGEFRLVLID 165 (199)
T ss_pred cCCCceEEEEEe
Confidence 42 577887
No 470
>KOG1826 consensus Ras GTPase activating protein RasGAP/neurofibromin [Defense mechanisms]
Probab=97.52 E-value=8.8e-05 Score=88.68 Aligned_cols=154 Identities=18% Similarity=0.146 Sum_probs=114.8
Q ss_pred HHHHHHHHhcCCCCccccceeecCCCcCCCccEEEEEecCC-cCHHHHHHhC----CCCCHHHHHHHHHHHHhhhhhccc
Q 007541 70 LREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVVFELME-SDLHQVIKAN----DDLTPEHYQFFLYQLLRGLKYIHT 144 (599)
Q Consensus 70 ~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~iylV~E~~~-g~L~~~i~~~----~~lse~~i~~i~~QLl~aL~yLHs 144 (599)
+.|...++...|+++.....-..+ .+....|.+++|+. |+++.+|-+. ..+.+.-+-....+.+.+..-+|+
T Consensus 1277 l~e~de~~~~~h~~~~~~p~rI~p---s~s~ee~~r~~~~~~g~~f~iIikg~ee~~~ld~~~v~~~~kvsvl~~~~~ls 1353 (2724)
T KOG1826|consen 1277 LSERDELREAKHYLTEVDPLRIPP---SESTEEYIRSLYVEFGKLFSIIIKGLEESPDLDRSPVHLRHKVSVLNRNVILS 1353 (2724)
T ss_pred hhhhhhhhhhhceeeecccccCCC---CCChHHHHHHHHHHHhHHHHHHHhccccCCcchhchHHHHHHHHHhccchhhh
Confidence 345555566789888776554432 23346789999998 7999988653 244455555555555777888776
Q ss_pred Cc-----eEeecCCCCcEEeCCCCceeeeccCccccccCCCCCcccccccccCccccCccccccccCCCCcchhhHhHHH
Q 007541 145 AN-----VFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGC 219 (599)
Q Consensus 145 ~g-----IvHrDLKP~NILv~~~~~lKL~DFGlA~~~~~~~~~~~~~t~~~gt~~Y~APE~l~~~~~~ys~~~DIWSlG~ 219 (599)
.. .+|++||+-|-+|..+..+|++++|+.+.. .+...+....++++.|++|++... -+++.++|||..||
T Consensus 1354 ~tnlg~T~v~~~Lkf~lpmIVtny~v~~gk~gLdKIk---np~~sf~Gl~l~sp~~v~qli~N~--ik~t~rsdilr~s~ 1428 (2724)
T KOG1826|consen 1354 LTNLGNTNVSKSLKFTLPMIVTNYNVKLGKGGLDKIK---NPVLSFFGLELCSPIYVLQLIKNE--IKFTKRSDILRRSL 1428 (2724)
T ss_pred cccCCccchhhhhhhhccceecCCccccccccccccc---CchHhhhhhhhCCHHHHHHHHHHH--HhhhhHHHHHHHHH
Confidence 52 799999999999999999999999999842 222233455678889999998766 57778899999999
Q ss_pred HHHHHHhCCCCC
Q 007541 220 IFAELLTGKPLF 231 (599)
Q Consensus 220 Il~eLltG~~pF 231 (599)
-+|++..|..+|
T Consensus 1429 ~ly~rs~~n~~f 1440 (2724)
T KOG1826|consen 1429 SLYLRSDGNAYF 1440 (2724)
T ss_pred HHHHHhcccHHH
Confidence 999999887766
No 471
>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C). Proteins in this uncharacterised family are described as transmembrane proteins.
Probab=97.26 E-value=0.00064 Score=66.02 Aligned_cols=97 Identities=23% Similarity=0.215 Sum_probs=77.4
Q ss_pred HHHHHHHhcCC-CCccccceeecCCCcCCCccEEEEEecCC-cCHHHH---HHhCCCCCHHHHHHHHHHHHhhhhhccc-
Q 007541 71 REIKLLRLLRH-PDIVEIKHILLPPSRREFKDIYVVFELME-SDLHQV---IKANDDLTPEHYQFFLYQLLRGLKYIHT- 144 (599)
Q Consensus 71 rEi~iL~~l~H-pnIv~l~~v~~~~s~~~~~~iylV~E~~~-g~L~~~---i~~~~~lse~~i~~i~~QLl~aL~yLHs- 144 (599)
.|.-+|+.+.+ +++.++++.+ .-++|.||.+ +.+... +......++.....|+.+|++.+.+|+.
T Consensus 8 ~E~lll~~l~~~~~~pk~lG~C---------G~~~v~E~~~~~~~~~~~~~l~~~~~~~w~~R~~iA~~lL~~l~~l~~~ 78 (188)
T PF12260_consen 8 NEPLLLQLLQGSEPFPKLLGSC---------GRFYVVEYVGAGSLYGIYRPLSQFLQSPWEQRAKIALQLLELLEELDHG 78 (188)
T ss_pred cHHHHHHHcCCCCCCCCeeeEC---------CCEEEEEeecCccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC
Confidence 58888999985 6999999998 2356889988 455421 1111246788999999999999999987
Q ss_pred --CceEeecCCCCcEEeCCCCceeeeccCccccc
Q 007541 145 --ANVFHRDLKPKNILANADCKLKICDFGLARVA 176 (599)
Q Consensus 145 --~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~ 176 (599)
..+.-.|++|+|+-++++|++|++|.......
T Consensus 79 ~~~~~~lcDv~~~nfgv~~~~~lk~iDld~v~~~ 112 (188)
T PF12260_consen 79 PLGFFYLCDVSPDNFGVNDDGRLKLIDLDDVFVE 112 (188)
T ss_pred CCCcEEEeecchHHeEEeCCCcEEEEechhcchh
Confidence 45888999999999999999999999877543
No 472
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=97.23 E-value=0.0053 Score=61.16 Aligned_cols=72 Identities=11% Similarity=0.196 Sum_probs=44.7
Q ss_pred EEEEeecCceEEEEEEECC-CCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCc-cccceeecCCCcCCCccEEEE
Q 007541 28 EEVIGKGSYGVVCSAYDTR-TGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDI-VEIKHILLPPSRREFKDIYVV 105 (599)
Q Consensus 28 ~~~LG~G~~g~V~~a~d~~-tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnI-v~l~~v~~~~s~~~~~~iylV 105 (599)
++.|..|-...||++.... .++.|++|+....... .....+|+.+++.+...++ .+++... . + .+|
T Consensus 3 i~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~~~---~~d~~~E~~~~~~l~~~gl~P~v~~~~--~---~----~~l 70 (235)
T cd05157 3 FKRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKTEL---IIDRERELRIHKLLSKHGLAPKLYATF--Q---N----GLI 70 (235)
T ss_pred EEEcCCcccceEEEEEcCCCCCCeEEEEEccCCccc---eecHHHHHHHHHHHHhCCCCCeEEEEe--C---C----cEE
Confidence 4667888889999986433 3578999976532111 1122478999998864333 3333322 1 1 379
Q ss_pred EecCCc
Q 007541 106 FELMES 111 (599)
Q Consensus 106 ~E~~~g 111 (599)
|||++|
T Consensus 71 ~e~i~G 76 (235)
T cd05157 71 YEFIPG 76 (235)
T ss_pred EEeeCC
Confidence 999886
No 473
>PRK09550 mtnK methylthioribose kinase; Reviewed
Probab=97.22 E-value=0.0058 Score=66.14 Aligned_cols=77 Identities=21% Similarity=0.207 Sum_probs=52.4
Q ss_pred EEEEeecCceEEEEEEECCCCcEEEEEEecCcc----c-ChhhHHHHHHHHHHHHhcC-C--CCccccceeecCCCcCCC
Q 007541 28 EEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIF----E-HVSDATRILREIKLLRLLR-H--PDIVEIKHILLPPSRREF 99 (599)
Q Consensus 28 ~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~----~-~~~~~~~i~rEi~iL~~l~-H--pnIv~l~~v~~~~s~~~~ 99 (599)
.+.||.|....||++.+...++.|+||.-.... . ......+...|...|+.+. + ..+.+++.+- .
T Consensus 31 ~~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~D--~----- 103 (401)
T PRK09550 31 AREIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHYD--E----- 103 (401)
T ss_pred eeEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEEC--C-----
Confidence 467999999999999986544689999743110 1 1234567788999888864 2 3455665542 1
Q ss_pred ccEEEEEecCCc
Q 007541 100 KDIYVVFELMES 111 (599)
Q Consensus 100 ~~iylV~E~~~g 111 (599)
..-++|||++++
T Consensus 104 ~~~~lVME~L~~ 115 (401)
T PRK09550 104 ELAVTVMEDLSD 115 (401)
T ss_pred CCCEEEEecCCC
Confidence 235799999984
No 474
>TIGR00938 thrB_alt homoserine kinase, Neisseria type. Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.
Probab=97.21 E-value=0.0015 Score=68.13 Aligned_cols=153 Identities=16% Similarity=0.121 Sum_probs=85.3
Q ss_pred cccccCCCCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCC--ccccceeec
Q 007541 15 FFTEYGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPD--IVEIKHILL 92 (599)
Q Consensus 15 ~~~~~~~~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~Hpn--Iv~l~~v~~ 92 (599)
++..|+. +....++.|+.|....+|++.. . +..+++|+.... .....+..|+.++..|.... +.+++....
T Consensus 15 ~l~~y~~-~~~~~i~~~~~G~~n~~y~v~t-~-~~~~vLK~~~~~----~~~~~i~~e~~~l~~L~~~g~pvp~~i~t~~ 87 (307)
T TIGR00938 15 FLDGYDL-GELLSLKGIAEGVENSNYLLTT-D-VGRYILTLYEKR----VKAEELPFFLALTTHLAARGLPVPKPVKSRD 87 (307)
T ss_pred HHHhcCC-CCceeccccCCccccceEEEEe-C-CCcEEEEEecCC----CCHHHHHHHHHHHHHHHHCCCCCCccccCCC
Confidence 4445555 3455577788888889998753 3 446778876431 12345567888888885333 333322110
Q ss_pred CC-CcCCCccEEEEEecCCcC-H-----H------HHH---Hh-CCCC--------CHHH-----HH----------HHH
Q 007541 93 PP-SRREFKDIYVVFELMESD-L-----H------QVI---KA-NDDL--------TPEH-----YQ----------FFL 132 (599)
Q Consensus 93 ~~-s~~~~~~iylV~E~~~g~-L-----~------~~i---~~-~~~l--------se~~-----i~----------~i~ 132 (599)
.. .....+..++||+|++|. + . ..+ +. ...+ .... .+ ...
T Consensus 88 g~~~~~~~g~~~~l~e~i~G~~~~~~~~~~~~~~G~~LA~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~ 167 (307)
T TIGR00938 88 GRQLSTLAGKPACLVEFLQGLSVGRPTAMHCRPVGEVLAWMHLAGAHFPENRKNSLRLEAWHILAEKCFEAAPQLEAHMG 167 (307)
T ss_pred CCeehhcCCeEEEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCCCCCChHHHHHHHHhhhhcccccCHHHH
Confidence 00 001134578999998861 1 1 111 10 0111 0000 00 001
Q ss_pred HHHHhhhhhcc-------cCceEeecCCCCcEEeCCCCceeeeccCccc
Q 007541 133 YQLLRGLKYIH-------TANVFHRDLKPKNILANADCKLKICDFGLAR 174 (599)
Q Consensus 133 ~QLl~aL~yLH-------s~gIvHrDLKP~NILv~~~~~lKL~DFGlA~ 174 (599)
..+...++++. ..++||+|+.+.||+++.++.+.|+||+.+.
T Consensus 168 ~~l~~~~~~l~~~~~~~~~~~l~HgD~~~~Nvl~~~~~~~~vIDfd~~~ 216 (307)
T TIGR00938 168 AELDKELDYLDKFWPRDLPRGVIHADLFPDNVLFDGDSVKGVIDFYFAC 216 (307)
T ss_pred HHHHHHHHHHHhhhhhcCCCccCCCCCCcCcEEEECCceEEEeeccccc
Confidence 11222344442 3689999999999999998877999999774
No 475
>cd05153 HomoserineK_II Homoserine Kinase, type II. Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.
Probab=97.20 E-value=0.0011 Score=68.55 Aligned_cols=151 Identities=17% Similarity=0.095 Sum_probs=84.1
Q ss_pred ccccCCCCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCC--ccccceeecC
Q 007541 16 FTEYGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPD--IVEIKHILLP 93 (599)
Q Consensus 16 ~~~~~~~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~Hpn--Iv~l~~v~~~ 93 (599)
+..|+.+ +..-++.|..|....+|+... .+..+++|+... .....+..|+.++..|.+.+ +.+++.....
T Consensus 8 l~~y~~~-~~~~i~~i~~G~~n~~y~v~~--~~~~~vLr~~~~-----~~~~~~~~e~~~l~~L~~~g~~vp~~i~~~~g 79 (296)
T cd05153 8 LADYDLG-ELLSFEGISAGIENTNYFVTT--DSGRYVLTLFEK-----VSAEELPFFLALLDHLAERGLPVPRPIADRDG 79 (296)
T ss_pred HHHcCCC-chhheecccCccccceEEEEe--CCCcEEEEEcCC-----CChHhccHHHHHHHHHHHCCCCCCccccCCCC
Confidence 3445542 233356788888889998753 345788998753 23445678999988886433 3343321100
Q ss_pred C-CcCCCccEEEEEecCCcC-H--------HHH---H---Hh-CCCCC------------HHHHH--------HHHHHHH
Q 007541 94 P-SRREFKDIYVVFELMESD-L--------HQV---I---KA-NDDLT------------PEHYQ--------FFLYQLL 136 (599)
Q Consensus 94 ~-s~~~~~~iylV~E~~~g~-L--------~~~---i---~~-~~~ls------------e~~i~--------~i~~QLl 136 (599)
. .....+..++|+++++|. + .++ + +. ...+. ..... .....+.
T Consensus 80 ~~~~~~~~~~~~l~~~i~G~~~~~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 159 (296)
T cd05153 80 EYLSELAGKPAALVEFLAGEHLTRPTAAHCRQIGEALARLHLAAQSFPGERNNLRGLAWIRELGKDLLPLLSAEDRALLA 159 (296)
T ss_pred cEeeeeCCceEEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHhccCCccCCCcCCcHHHHHHHHHhccccCHHHHHHHH
Confidence 0 001123568999999862 1 111 1 00 00000 00000 0011122
Q ss_pred hhhhhccc-------CceEeecCCCCcEEeCCCCceeeeccCccc
Q 007541 137 RGLKYIHT-------ANVFHRDLKPKNILANADCKLKICDFGLAR 174 (599)
Q Consensus 137 ~aL~yLHs-------~gIvHrDLKP~NILv~~~~~lKL~DFGlA~ 174 (599)
.++.++.. .++||+|+.|.|||++.++.+.|+||+.+.
T Consensus 160 ~~~~~l~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~iIDfe~a~ 204 (296)
T cd05153 160 DELARQDAFDPSDLPRGVIHADLFRDNVLFDGDELSGVIDFYFAC 204 (296)
T ss_pred HHHHHHHhhhhhcCCCcCCccCcCcccEEEeCCceEEEeehhhhc
Confidence 23333332 479999999999999998778999999874
No 476
>PRK05231 homoserine kinase; Provisional
Probab=97.10 E-value=0.0033 Score=65.85 Aligned_cols=150 Identities=16% Similarity=0.128 Sum_probs=78.9
Q ss_pred ccccCCCCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCC
Q 007541 16 FTEYGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPS 95 (599)
Q Consensus 16 ~~~~~~~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s 95 (599)
+..|+.+ .-.-.+.|+.|....+|.... . +..+++|++.. .....+..|+.+++.|...++. +-.++....
T Consensus 16 l~~y~~~-~~~~~~~l~~G~~n~~y~v~t-~-~g~~vLK~~~~-----~~~~~l~~~~~~l~~L~~~glp-vP~~i~~~~ 86 (319)
T PRK05231 16 LAPYDLG-ELLSLKGIAEGIENSNFFLTT-T-QGEYVLTLFER-----LTAEDLPFFLGLMQHLAARGVP-VPAPVARRD 86 (319)
T ss_pred HHhcCCc-hhhccchhccccccceEEEEe-C-CCcEEEEEecc-----CChHHhHHHHHHHHHHHHCCCC-CCcceeCCC
Confidence 3445543 233346677788889998853 2 33688998641 1233445677777777533321 111221111
Q ss_pred c----CCCccEEEEEecCCcC---------H---HHHHH----hCCCC--------C--H--HHH-----------HHHH
Q 007541 96 R----REFKDIYVVFELMESD---------L---HQVIK----ANDDL--------T--P--EHY-----------QFFL 132 (599)
Q Consensus 96 ~----~~~~~iylV~E~~~g~---------L---~~~i~----~~~~l--------s--e--~~i-----------~~i~ 132 (599)
. ...+..++|+++++|. . -+.+. ....+ . . ... ...+
T Consensus 87 G~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~G~~LA~lH~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 166 (319)
T PRK05231 87 GAALGELAGKPAAIVTFLEGKWPRAPTAAHCAEVGEMLARMHLAGRDFPLERPNLRGLAWWRELAPRLLPFLADEQAALL 166 (319)
T ss_pred CCEeeeeCCEEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHhhhhcCCccCCCCCChHHHHHHHHHHhhccChhHHHHH
Confidence 0 1123578999999873 1 11111 00001 0 0 000 1111
Q ss_pred HHHH-hhhhhcc-------cCceEeecCCCCcEEeCCCCceeeeccCccc
Q 007541 133 YQLL-RGLKYIH-------TANVFHRDLKPKNILANADCKLKICDFGLAR 174 (599)
Q Consensus 133 ~QLl-~aL~yLH-------s~gIvHrDLKP~NILv~~~~~lKL~DFGlA~ 174 (599)
.+.+ ..+..+. ..++||+|+.|.|||++.+...-|+||+.+.
T Consensus 167 ~~~~~~~~~~~~~~~~~~lp~~liHgD~~~~Nil~~~~~~~~iIDf~~~~ 216 (319)
T PRK05231 167 EAELAAQLAFLASAAWPALPRGVIHADLFRDNVLFEGDRLSGFIDFYFAC 216 (319)
T ss_pred HHHHHHHHHhhhccccccCCcccCCCCCCCCcEEEECCceEEEEeccccc
Confidence 1111 1112222 3489999999999999966556899999874
No 477
>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]
Probab=97.09 E-value=0.00031 Score=72.64 Aligned_cols=138 Identities=20% Similarity=0.241 Sum_probs=96.9
Q ss_pred CCceEEEEEEeecCceEEEEEEECCCCcEEEEEEecC---ccc------------Ch-----hhHHHHHHHHHHHHhcC-
Q 007541 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKIND---IFE------------HV-----SDATRILREIKLLRLLR- 80 (599)
Q Consensus 22 ~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~---~~~------------~~-----~~~~~i~rEi~iL~~l~- 80 (599)
+.-|.++..||-|.-+-||.+-+ ..|+..++|+=.. .|. +. -......+|...|+.|.
T Consensus 91 ~~v~svGnqIGVGKESDIY~v~d-~~G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRlaa~kEfafmkaL~e 169 (465)
T KOG2268|consen 91 GSVESVGNQIGVGKESDIYVVAD-EEGNPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLAATKEFAFMKALYE 169 (465)
T ss_pred chhhhhccccccccccceEEEec-CCCCchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHHHHHHHHHHHHHHH
Confidence 44677889999999999999976 4578888884211 000 00 01123457888888885
Q ss_pred CC-CccccceeecCCCcCCCccEEEEEecCCc-CHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccCceEeecCCCCcEE
Q 007541 81 HP-DIVEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNIL 158 (599)
Q Consensus 81 Hp-nIv~l~~v~~~~s~~~~~~iylV~E~~~g-~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~gIvHrDLKP~NIL 158 (599)
|- -|.+.+++ ..-|+|||++.| .|.++-+- ..+..+...|+.-+.-|..+|+||+|..-=||+
T Consensus 170 ~gfpVPkpiD~---------~RH~Vvmelv~g~Pl~~v~~v------~d~~~ly~~lm~~Iv~la~~GlIHgDFNEFNim 234 (465)
T KOG2268|consen 170 RGFPVPKPIDH---------NRHCVVMELVDGYPLRQVRHV------EDPPTLYDDLMGLIVRLANHGLIHGDFNEFNIM 234 (465)
T ss_pred cCCCCCCcccc---------cceeeHHHhhcccceeeeeec------CChHHHHHHHHHHHHHHHHcCceecccchheeE
Confidence 32 23333332 356899999996 66665321 233456667777788899999999999999999
Q ss_pred eCCCCceeeeccCcccc
Q 007541 159 ANADCKLKICDFGLARV 175 (599)
Q Consensus 159 v~~~~~lKL~DFGlA~~ 175 (599)
+.+++.++++||--...
T Consensus 235 v~dd~~i~vIDFPQmvS 251 (465)
T KOG2268|consen 235 VKDDDKIVVIDFPQMVS 251 (465)
T ss_pred EecCCCEEEeechHhhc
Confidence 99999999999986643
No 478
>TIGR02721 ycfN_thiK thiamine kinase. Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.
Probab=97.03 E-value=0.0022 Score=65.02 Aligned_cols=130 Identities=13% Similarity=0.227 Sum_probs=73.2
Q ss_pred EeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCcc-ccceeecCCCcCCCccEEEEEecC
Q 007541 31 IGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIV-EIKHILLPPSRREFKDIYVVFELM 109 (599)
Q Consensus 31 LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv-~l~~v~~~~s~~~~~~iylV~E~~ 109 (599)
+..|-...+|+.. .+++.+++|......... . ....+|..+|+.+..-.++ +++... . -++|+||+
T Consensus 4 ~~~G~tn~~y~~~--~~~~~~vlR~~~~~~~~~-~-~~r~~E~~~l~~l~~~g~~P~~i~~~--~-------~~~v~e~i 70 (256)
T TIGR02721 4 LSGGLTNRSWRIE--HPGISFVWRPQSPVCKAL-G-VDRQREYQILQALSALGLAPKPILVN--E-------HWLLVEWL 70 (256)
T ss_pred CCCcCcCCeEEEE--eCCccEEEeeCCcccccc-c-CcHHHHHHHHHHHHhcCCCCceEEEe--C-------CEEEEEec
Confidence 4568888899885 457788898754321111 0 1235799999988643332 222221 1 16899999
Q ss_pred Cc-CHH--------------HHHH---hCC----CCC-HHHHHHHHHHH------------Hhhhhhcc-----cCceEe
Q 007541 110 ES-DLH--------------QVIK---AND----DLT-PEHYQFFLYQL------------LRGLKYIH-----TANVFH 149 (599)
Q Consensus 110 ~g-~L~--------------~~i~---~~~----~ls-e~~i~~i~~QL------------l~aL~yLH-----s~gIvH 149 (599)
+| .+. +.+. .-. .++ ...+..+..++ +..+.... ...++|
T Consensus 71 ~G~~~~~~~~~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~H 150 (256)
T TIGR02721 71 EGEVITLDQFVALDLLLELAALLHQLHSQPRFGYPLSLKARIAHYWLQIDPARRTPEWLRLYKQFRSAPEPAPLPLAPLH 150 (256)
T ss_pred cCcccccccccCchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhcccccCChHHHHHHHHHHhccCCCCCCCeeec
Confidence 86 221 1111 111 111 11222222222 11111110 125899
Q ss_pred ecCCCCcEEeCCCCceeeeccCccc
Q 007541 150 RDLKPKNILANADCKLKICDFGLAR 174 (599)
Q Consensus 150 rDLKP~NILv~~~~~lKL~DFGlA~ 174 (599)
+|+.|.|||++.++ +.|+||+.|.
T Consensus 151 ~Dl~~~Nil~~~~~-~~lIDwE~a~ 174 (256)
T TIGR02721 151 MDVHAYNLVVTPQG-LKLIDWEYAS 174 (256)
T ss_pred CCCCcCcEEEeCCC-CEEEeccccC
Confidence 99999999999877 8899999885
No 479
>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes. The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer
Probab=97.02 E-value=0.0035 Score=65.08 Aligned_cols=30 Identities=37% Similarity=0.403 Sum_probs=26.7
Q ss_pred CceEeecCCCCcEEeCCC----CceeeeccCccc
Q 007541 145 ANVFHRDLKPKNILANAD----CKLKICDFGLAR 174 (599)
Q Consensus 145 ~gIvHrDLKP~NILv~~~----~~lKL~DFGlA~ 174 (599)
.+++|+|+.+.|||++.+ +.+.|+||..|.
T Consensus 179 ~~lcH~Dl~~~Nil~~~~~~~~~~i~lIDwEya~ 212 (302)
T cd05156 179 VVFCHNDLQEGNILLLNPSSETKKLVLIDFEYAS 212 (302)
T ss_pred ceEEecCCCcCeEEecCCCCCCCcEEEEeeCCCC
Confidence 368999999999999985 889999999874
No 480
>PRK10593 hypothetical protein; Provisional
Probab=96.88 E-value=0.012 Score=61.32 Aligned_cols=80 Identities=13% Similarity=0.127 Sum_probs=52.7
Q ss_pred ceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCC---CCccccceeecCCCcCCCc
Q 007541 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRH---PDIVEIKHILLPPSRREFK 100 (599)
Q Consensus 24 rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~H---pnIv~l~~v~~~~s~~~~~ 100 (599)
+-.-.+.||.|..+.||...+. +..+.+|..+. ......+.+|...|+.|.. -.+.++++++... ...+
T Consensus 15 ~~~~~~~i~~G~~~~vy~~~~~--~~~~~~k~~~~----~~~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~--~~~g 86 (297)
T PRK10593 15 KLSRVECISEQPYAALWALYDS--QGNPMPLMARS----FSTPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHE--QSPG 86 (297)
T ss_pred hhheeeecCCccceeEEEEEcC--CCCEEEEEecc----cccchHHHHHHHHHHHHccCCCCCcCcEEEEeccC--CcCC
Confidence 3444678999999999998532 33567776432 1123467789999998863 3466666665432 1223
Q ss_pred cEEEEEecCCc
Q 007541 101 DIYVVFELMES 111 (599)
Q Consensus 101 ~iylV~E~~~g 111 (599)
.-+||||+++|
T Consensus 87 ~~~LVmE~i~G 97 (297)
T PRK10593 87 PDVLLLERLRG 97 (297)
T ss_pred CeEEEEeccCC
Confidence 57999999885
No 481
>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]
Probab=96.74 E-value=0.0053 Score=64.73 Aligned_cols=139 Identities=25% Similarity=0.333 Sum_probs=93.8
Q ss_pred EEEEEEeecCceEEEEEEECCCCcEEEEEEecCc----------------ccC----hhh--HHH--HHHHHHHHHhcCC
Q 007541 26 KIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDI----------------FEH----VSD--ATR--ILREIKLLRLLRH 81 (599)
Q Consensus 26 ~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~----------------~~~----~~~--~~~--i~rEi~iL~~l~H 81 (599)
.|-..|..|--+.||.|.. ..|..+|||+++-+ |.+ ..- .-+ ...|++-|++|+.
T Consensus 147 ~inGCiSTGKEANVYHat~-~dG~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RNLkRl~~ 225 (520)
T KOG2270|consen 147 EINGCISTGKEANVYHATE-EDGSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRNLKRLNN 225 (520)
T ss_pred ecccccccCccceeEeeec-CCCceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHHHHHHHh
Confidence 4456677888999999874 56788999988521 111 111 111 2357777777766
Q ss_pred CCccccceeecCCCcCCCccEEEEEecCCcC--HHHHHHhCCCCCHHHHHHHHHHHHhhhhhc-ccCceEeecCCCCcEE
Q 007541 82 PDIVEIKHILLPPSRREFKDIYVVFELMESD--LHQVIKANDDLTPEHYQFFLYQLLRGLKYI-HTANVFHRDLKPKNIL 158 (599)
Q Consensus 82 pnIv~l~~v~~~~s~~~~~~iylV~E~~~g~--L~~~i~~~~~lse~~i~~i~~QLl~aL~yL-Hs~gIvHrDLKP~NIL 158 (599)
..|....-+++- .-.|||++++.+ -.-.|+. -.++...+..+-.|++..+.-| |.+++||.||.=-|+|
T Consensus 226 aGIP~PePIlLk-------~hVLVM~FlGrdgw~aPkLKd-~~ls~~ka~~~Y~~~v~~MR~lY~~c~LVHADLSEfN~L 297 (520)
T KOG2270|consen 226 AGIPCPEPILLK-------NHVLVMEFLGRDGWAAPKLKD-ASLSTSKARELYQQCVRIMRRLYQKCRLVHADLSEFNLL 297 (520)
T ss_pred cCCCCCCceeee-------cceEeeeeccCCCCcCccccc-ccCChHHHHHHHHHHHHHHHHHHHHhceeccchhhhhhe
Confidence 555443333322 236999999942 2222222 2577788888888888877776 5568999999999999
Q ss_pred eCCCCceeeeccCccc
Q 007541 159 ANADCKLKICDFGLAR 174 (599)
Q Consensus 159 v~~~~~lKL~DFGlA~ 174 (599)
+. +|.|.|+|-+-+.
T Consensus 298 yh-dG~lyiIDVSQSV 312 (520)
T KOG2270|consen 298 YH-DGKLYIIDVSQSV 312 (520)
T ss_pred EE-CCEEEEEEccccc
Confidence 85 7899999988774
No 482
>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]
Probab=96.31 E-value=0.037 Score=58.08 Aligned_cols=148 Identities=18% Similarity=0.195 Sum_probs=84.6
Q ss_pred CceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCC--CccccceeecCCCcCCCc
Q 007541 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHP--DIVEIKHILLPPSRREFK 100 (599)
Q Consensus 23 ~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~Hp--nIv~l~~v~~~~s~~~~~ 100 (599)
..-.+++.+..|-.-.+|...+. ++.+++. ...............+|..+|+.+.-- -+-..++++.+.. -.
T Consensus 25 ~~~~~v~~~~~G~sn~t~~~~~~--~~~~vlR-~P~~~~~~~~~~~~~re~~~i~~l~~~~vP~p~~~~~~~~~~---~g 98 (321)
T COG3173 25 AGLLIVEEISGGWSNDTFRLGDT--GQKYVLR-KPPRGDPVESAHDEKREYRVIAALLDVDVPVPRAFGLCGEGY---LG 98 (321)
T ss_pred CCCceeeeccCCcccceEEEecC--CceEEEe-cCCccccchhhhHHHhHHHHHHHhcCCCCCCcccccccccCC---CC
Confidence 34455666655655566666544 8888888 332223344566677898888877532 2223333332221 24
Q ss_pred cEEEEEecCCc-------------------CHHHHHHh-------C-------CCCCHHHHHHHHHHH------------
Q 007541 101 DIYVVFELMES-------------------DLHQVIKA-------N-------DDLTPEHYQFFLYQL------------ 135 (599)
Q Consensus 101 ~iylV~E~~~g-------------------~L~~~i~~-------~-------~~lse~~i~~i~~QL------------ 135 (599)
..|.||++++| +|-++|.. . +.....++..+..+.
T Consensus 99 ~pf~v~~~veGe~~~~~~~~~~~~~~~~~~~l~~~La~LH~ida~~~~~~g~~~~~~~rql~~~~~~~~~~~~~~~~~~p 178 (321)
T COG3173 99 TPFYVMEWVEGEVVWSALPPESLGRQFALDALADFLAELHSIDAAGLPDPGKPNAYRGRQLARWDDEYRRAKKELGGRIP 178 (321)
T ss_pred CceEEEEEecceeccCcCCcccchHHHHHHHHHHHHHHHhCCCCcCCCCCCccCccccchhhHHHHHHHHHHHhccCCCc
Confidence 67899999987 12222211 0 001111222222222
Q ss_pred --Hhhhhhcc--------cCceEeecCCCCcEEeCCCCceeeeccCccccc
Q 007541 136 --LRGLKYIH--------TANVFHRDLKPKNILANADCKLKICDFGLARVA 176 (599)
Q Consensus 136 --l~aL~yLH--------s~gIvHrDLKP~NILv~~~~~lKL~DFGlA~~~ 176 (599)
..-..+|+ ...++|+|+.+.||+++.++.+-|.||+++...
T Consensus 179 ~~~~~~~Wl~~~~p~~~~~~~lvHGD~~~gNlii~~~~~~gVlDwe~~~lG 229 (321)
T COG3173 179 LADRLIKWLEANRPPWAGPPVLVHGDYRPGNLIIDPGRPTGVLDWELATLG 229 (321)
T ss_pred hHHHHHHHHHhcCCCcCCCceeeeCCcccCCEEEeCCCeeEEEeccccccC
Confidence 11222332 335999999999999999999999999999653
No 483
>TIGR02906 spore_CotS spore coat protein, CotS family. Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.
Probab=96.27 E-value=0.025 Score=58.75 Aligned_cols=29 Identities=24% Similarity=0.377 Sum_probs=25.6
Q ss_pred CceEeecCCCCcEEeCCCCceeeeccCccc
Q 007541 145 ANVFHRDLKPKNILANADCKLKICDFGLAR 174 (599)
Q Consensus 145 ~gIvHrDLKP~NILv~~~~~lKL~DFGlA~ 174 (599)
.+++|+|+.+.|||++. +.+.|+||+.+.
T Consensus 187 ~~liHgD~~~~Nil~~~-~~i~lIDfd~~~ 215 (313)
T TIGR02906 187 RGFCHQDYAYHNILLKD-NEVYVIDFDYCT 215 (313)
T ss_pred CceEcCCCCcccEEEeC-CcEEEEECcccc
Confidence 57999999999999987 678999999764
No 484
>TIGR01767 MTRK 5-methylthioribose kinase. This enzyme is involved in the methionine salvage pathway in certain bacteria.
Probab=96.27 E-value=0.043 Score=58.47 Aligned_cols=82 Identities=17% Similarity=0.114 Sum_probs=52.9
Q ss_pred EEeecCceEEEEEEECCCCcEEEEEEecC-----cccChhhHHHHHHHHHHHHhcC--CCC-ccccceeecCCCcCCCcc
Q 007541 30 VIGKGSYGVVCSAYDTRTGEKVAIKKIND-----IFEHVSDATRILREIKLLRLLR--HPD-IVEIKHILLPPSRREFKD 101 (599)
Q Consensus 30 ~LG~G~~g~V~~a~d~~tg~~vAIK~i~~-----~~~~~~~~~~i~rEi~iL~~l~--Hpn-Iv~l~~v~~~~s~~~~~~ 101 (599)
.||.|....||++.+...++.|+||.-.. .........|...|...|+... -|. +.+++.+- + ..
T Consensus 2 EigdGnlN~VfrV~~~~g~~svIVKQAlp~vRv~g~~wpl~~~R~~~E~~~L~~~~~~~P~~vP~vy~~D--~-----e~ 74 (370)
T TIGR01767 2 EVGDGNLNLVFHVYDQEGDRAAIVKQALPYVRVVGESWPLTLDRARIESSALIRQGEHVPHLVPRIFHFD--T-----EM 74 (370)
T ss_pred cCCCCceEEEEEEEcCCCCeeEEEEEcCHHHhhcCCCCCCCccHHHHHHHHHHHhhccCccccCeEEEEc--c-----cc
Confidence 47999999999999864447899996431 1123455677888999988764 343 44443332 1 23
Q ss_pred EEEEEecCCc--CHHHHHH
Q 007541 102 IYVVFELMES--DLHQVIK 118 (599)
Q Consensus 102 iylV~E~~~g--~L~~~i~ 118 (599)
-.+|||+++. .|.+.+.
T Consensus 75 ~~~vMEdL~~~~ilR~~Li 93 (370)
T TIGR01767 75 AVTVMEDLSHHKIARKGLI 93 (370)
T ss_pred ceehHhhCccchHHHHHHH
Confidence 4689999973 4545443
No 485
>TIGR02904 spore_ysxE spore coat protein YsxE. Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.
Probab=96.01 E-value=0.052 Score=56.77 Aligned_cols=30 Identities=17% Similarity=0.135 Sum_probs=27.7
Q ss_pred ceEeecCCCCcEEeCCCCceeeeccCcccc
Q 007541 146 NVFHRDLKPKNILANADCKLKICDFGLARV 175 (599)
Q Consensus 146 gIvHrDLKP~NILv~~~~~lKL~DFGlA~~ 175 (599)
++||+|+.+.|+|++.++.+.|+||..+..
T Consensus 197 ~lcHgD~~~~Nvl~~~~~~~~iIDfd~~~~ 226 (309)
T TIGR02904 197 VLVHGKLSLSHFLYDETRGGYFINFEKASF 226 (309)
T ss_pred eeeCCCCcHHhEEEcCCCCEEEEEhhhccc
Confidence 799999999999999999999999998853
No 486
>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported
Probab=95.99 E-value=0.085 Score=54.39 Aligned_cols=31 Identities=32% Similarity=0.558 Sum_probs=26.0
Q ss_pred CceEeecCCCCcEEeCCCCc-eeeeccCcccc
Q 007541 145 ANVFHRDLKPKNILANADCK-LKICDFGLARV 175 (599)
Q Consensus 145 ~gIvHrDLKP~NILv~~~~~-lKL~DFGlA~~ 175 (599)
..++|+|+.|.|||++.++. .-|+||+.+..
T Consensus 185 ~~lvHGD~~~~Nilv~~~~~~~gviDWe~a~i 216 (276)
T cd05152 185 TVLVHGDLHPGHILIDEDARVTGLIDWTEAKV 216 (276)
T ss_pred CeeEeCCCCCCcEEEeCCCCEEEEECcHhccc
Confidence 45999999999999997565 56999998853
No 487
>PRK12396 5-methylribose kinase; Reviewed
Probab=95.97 E-value=0.043 Score=59.23 Aligned_cols=92 Identities=18% Similarity=0.169 Sum_probs=59.4
Q ss_pred CCCCceEEEEEEeecCceEEEEEEECCCCcEEEEEEec----CcccChhhHHHHHHHHHHHHhcC--CCC-ccccceeec
Q 007541 20 GEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKIN----DIFEHVSDATRILREIKLLRLLR--HPD-IVEIKHILL 92 (599)
Q Consensus 20 ~~~~rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~----~~~~~~~~~~~i~rEi~iL~~l~--Hpn-Iv~l~~v~~ 92 (599)
...+.+. .+.||.|.-..||++.+...++.|+||.-. ......-...|...|..+|+.+. -|. +.+++.+-
T Consensus 27 ~~~~~~~-~~eigdGnlN~VfrV~~~~~~~svIVKQAlp~vRv~~swpL~~~R~~~E~~aL~~~~~~~P~~VP~vy~~D- 104 (409)
T PRK12396 27 EHAKGLQ-CKEIGDGNLNYVFRVWDEQKNISVIVKQAGDTARISDEFKLSTNRIRIESDVLQLEEELAPGLVPKVYLFD- 104 (409)
T ss_pred CCcccce-eeEcCCCceEEEEEEeeCCCCceEEEEeccHhhccCCCCCCChHHHHHHHHHHHHHHhhCCCcCCeEEEEC-
Confidence 3334444 677999999999999885446789999542 11233456778888999998774 353 44444332
Q ss_pred CCCcCCCccEEEEEecCCc--CHHHHHHh
Q 007541 93 PPSRREFKDIYVVFELMES--DLHQVIKA 119 (599)
Q Consensus 93 ~~s~~~~~~iylV~E~~~g--~L~~~i~~ 119 (599)
...-.+|||+++. .|.+.+.+
T Consensus 105 ------~e~~~~vMEdL~~~~ilR~~Li~ 127 (409)
T PRK12396 105 ------SVMNCCVMEDLSDHTILRTALIN 127 (409)
T ss_pred ------cHHhhHHHHhCcccHHHHHHHHc
Confidence 1234689999863 45555543
No 488
>PLN02421 phosphotransferase, alcohol group as acceptor/kinase
Probab=95.97 E-value=0.055 Score=57.25 Aligned_cols=28 Identities=32% Similarity=0.464 Sum_probs=25.0
Q ss_pred eEeecCCCCcEEeCC-CCceeeeccCccc
Q 007541 147 VFHRDLKPKNILANA-DCKLKICDFGLAR 174 (599)
Q Consensus 147 IvHrDLKP~NILv~~-~~~lKL~DFGlA~ 174 (599)
++|.||.+.|||++. ++.++++||..|.
T Consensus 184 ~CHnDl~~~NiL~~~~~~~l~lID~EYag 212 (330)
T PLN02421 184 FAHNDLLSGNLMLNEDEGKLYFIDFEYGS 212 (330)
T ss_pred EEECCCCcccEEEeCCCCcEEEEcccccC
Confidence 799999999999975 5789999999874
No 489
>PLN02236 choline kinase
Probab=95.87 E-value=0.058 Score=57.47 Aligned_cols=139 Identities=16% Similarity=0.119 Sum_probs=78.0
Q ss_pred CceEEEEEEeecCceEEEEEEECC----CCcEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCcc-ccceeecCCCcC
Q 007541 23 SRYKIEEVIGKGSYGVVCSAYDTR----TGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIV-EIKHILLPPSRR 97 (599)
Q Consensus 23 ~rY~i~~~LG~G~~g~V~~a~d~~----tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv-~l~~v~~~~s~~ 97 (599)
+...+ ..|..|-.-.+|++.... +++.|++|+...... ....+ .+|..+++.+..-++. ++++.+.
T Consensus 37 ~~~~i-~~l~gGlTN~~y~v~~~~~~~~~~~~~v~Ri~g~~t~--~~idR-~~E~~~~~~l~~~gl~P~~~~~~~----- 107 (344)
T PLN02236 37 EALQV-IPLKGAMTNEVFQIKWPTKEGNLGRKVLVRIYGEGVE--LFFDR-DDEIRTFECMSRHGQGPRLLGRFP----- 107 (344)
T ss_pred CcEEE-EEcCCcccceeEEEEeCCCCCCCCCeEEEEEccCCCC--eeech-HHHHHHHHHHHHcCCCCceEEEEC-----
Confidence 34444 455558888999986422 347899998764321 11222 4788998888643333 4444441
Q ss_pred CCccEEEEEecCCc-CHH-----------HHH---H---hCC----C-C-CHHHHHHHHHHHH-----------------
Q 007541 98 EFKDIYVVFELMES-DLH-----------QVI---K---AND----D-L-TPEHYQFFLYQLL----------------- 136 (599)
Q Consensus 98 ~~~~iylV~E~~~g-~L~-----------~~i---~---~~~----~-l-se~~i~~i~~QLl----------------- 136 (599)
+ ..|.+|+++ +|. ++. . +-. . . -.+.+..++.++.
T Consensus 108 ~----g~v~efi~g~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~l~ 183 (344)
T PLN02236 108 N----GRVEEFIHARTLSAADLRDPEISALIAAKLREFHSLDMPGPKNVLLWDRLRNWLKEAKNLCSPEEAKEFRLDSLE 183 (344)
T ss_pred C----ceEEEeeCCCCCCHHHcCChHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhhcCcchhhhcCHHHHH
Confidence 1 147888875 221 111 1 100 0 1 1223333332221
Q ss_pred ---hh----hhh-cccCceEeecCCCCcEEeCC-CCceeeeccCccc
Q 007541 137 ---RG----LKY-IHTANVFHRDLKPKNILANA-DCKLKICDFGLAR 174 (599)
Q Consensus 137 ---~a----L~y-LHs~gIvHrDLKP~NILv~~-~~~lKL~DFGlA~ 174 (599)
.. +.. .+...++|+||++.|||++. ++.+.|+||..|.
T Consensus 184 ~~~~~L~~~~~~~~~~~~~cH~Dl~~~Nil~~~~~~~~~lID~Eya~ 230 (344)
T PLN02236 184 DEINLLEKELSGDDQEIGFCHNDLQYGNIMIDEETRAITIIDYEYAS 230 (344)
T ss_pred HHHHHHHHHhcccCCCceEEeCCCCcCcEEEeCCCCcEEEEeehhcc
Confidence 11 111 23346999999999999986 4789999999874
No 490
>PTZ00384 choline kinase; Provisional
Probab=94.25 E-value=0.51 Score=51.07 Aligned_cols=29 Identities=31% Similarity=0.287 Sum_probs=24.3
Q ss_pred CceEeecCCCCcEEeCCCCceeeeccCccc
Q 007541 145 ANVFHRDLKPKNILANADCKLKICDFGLAR 174 (599)
Q Consensus 145 ~gIvHrDLKP~NILv~~~~~lKL~DFGlA~ 174 (599)
...+|.||-+.|||.+. ..+.++||..|.
T Consensus 227 ~VfCHNDL~~gNIL~~~-~~l~lID~EYA~ 255 (383)
T PTZ00384 227 VLFCHNDLFFTNILDFN-QGIYFIDFDFAG 255 (383)
T ss_pred eeeeeccCCcccEEecC-CCEEEEEecccc
Confidence 46899999999999764 469999998773
No 491
>PLN02756 S-methyl-5-thioribose kinase
Probab=94.11 E-value=0.57 Score=50.94 Aligned_cols=76 Identities=16% Similarity=0.137 Sum_probs=50.5
Q ss_pred EEEEEeecCceEEEEEEECCCCcEEEEEEecCccc-----ChhhHHHHHHHHHHHHhcC---CCCccccceeecCCCcCC
Q 007541 27 IEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFE-----HVSDATRILREIKLLRLLR---HPDIVEIKHILLPPSRRE 98 (599)
Q Consensus 27 i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~-----~~~~~~~i~rEi~iL~~l~---HpnIv~l~~v~~~~s~~~ 98 (599)
..+.||.|....||+..+. +..|+||.-..... ......|...|...|+.+. ...+.+++.+..+
T Consensus 36 ~~~eiggGn~N~VyrV~~~--~~svVVKqa~p~~r~vga~wpl~~~R~~~Ea~aL~~~~~~~p~~VPkVy~~ded----- 108 (418)
T PLN02756 36 KIKEVGDGNLNFVYIVVSS--SGSFVIKQALPYIRCIGESWPMTKERAYFEATALREHGRLCPDHVPEVYHFDRT----- 108 (418)
T ss_pred eEEEcCCCceeeEEEEEcC--CccEEEEeCCccccCCCccccCCccHHHHHHHHHHHhhhcCCCCCCeEEEECCC-----
Confidence 4678899999999998763 45689997541111 1124566677888887764 2356666666532
Q ss_pred CccEEEEEecCCc
Q 007541 99 FKDIYVVFELMES 111 (599)
Q Consensus 99 ~~~iylV~E~~~g 111 (599)
.-++|||++++
T Consensus 109 --~~vlvME~L~~ 119 (418)
T PLN02756 109 --MALIGMRYLEP 119 (418)
T ss_pred --CCEEEEeecCC
Confidence 24788999975
No 492
>PF07387 Seadorna_VP7: Seadornavirus VP7; InterPro: IPR009973 This family consists of several Seadornavirus specific VP7 proteins of around 305 residues in length. The function of this family is unknown.
Probab=93.99 E-value=0.16 Score=50.41 Aligned_cols=100 Identities=18% Similarity=0.242 Sum_probs=63.5
Q ss_pred cEEEEEEecCcccChhhHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEEEEEecCCc--C-HHHHHHhCCCCCH
Q 007541 49 EKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVVFELMES--D-LHQVIKANDDLTP 125 (599)
Q Consensus 49 ~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~v~~~~s~~~~~~iylV~E~~~g--~-L~~~i~~~~~lse 125 (599)
....+|++....... ...-+..+..++.++. .|++|+. .+.-.+-++.|+|-. . ...++.
T Consensus 86 G~L~lKKi~slp~~~-~~~~y~nky~v~Armh--GilrL~N-------Dn~~~yGvIlE~Cy~~~i~~~N~i~------- 148 (308)
T PF07387_consen 86 GPLFLKKIRSLPCCI-NDALYFNKYRVFARMH--GILRLKN-------DNNYKYGVILERCYKIKINFSNFIT------- 148 (308)
T ss_pred chhhhhhccCCCccc-chhhhhhhhhHHHHhh--heeEeec-------CCCceeEEEEeeccCcccchhHHHH-------
Confidence 344566665322221 2233467788877654 4777652 233467788998863 1 111211
Q ss_pred HHHHHHHHHHHhhhhhcccC--ceEeecCCCCcEEeCCCCceeeeccCcc
Q 007541 126 EHYQFFLYQLLRGLKYIHTA--NVFHRDLKPKNILANADCKLKICDFGLA 173 (599)
Q Consensus 126 ~~i~~i~~QLl~aL~yLHs~--gIvHrDLKP~NILv~~~~~lKL~DFGlA 173 (599)
.=+..|.-.|+. +.+|+|-.|+||+.|..|.+||.|-+.-
T Consensus 149 --------agi~~L~~fH~~~~~~lHGD~np~NiM~D~~G~lKlVDP~~L 190 (308)
T PF07387_consen 149 --------AGIKDLMDFHSENQHCLHGDCNPDNIMCDKFGYLKLVDPVCL 190 (308)
T ss_pred --------HhHHHHHHhhccCCCeecCCCChhheeecCCCCEEecChhhh
Confidence 114567778853 6999999999999999999999997743
No 493
>PRK06148 hypothetical protein; Provisional
Probab=93.12 E-value=0.54 Score=57.25 Aligned_cols=31 Identities=42% Similarity=0.574 Sum_probs=26.4
Q ss_pred CceEeecCCCCcEEeCCCC--cee-eeccCcccc
Q 007541 145 ANVFHRDLKPKNILANADC--KLK-ICDFGLARV 175 (599)
Q Consensus 145 ~gIvHrDLKP~NILv~~~~--~lK-L~DFGlA~~ 175 (599)
.++||.|+.+.|||++.++ ++. |+|||.+..
T Consensus 203 ~~vIHgDln~~NiLv~~~~~~~isGiIDFgDa~~ 236 (1013)
T PRK06148 203 AQVIHNDANDYNILVDADDGERISGLIDFGDAVH 236 (1013)
T ss_pred cceECCCCCcccEEEcCCCCcceEEEEECccccc
Confidence 4799999999999999875 554 999998853
No 494
>PF05445 Pox_ser-thr_kin: Poxvirus serine/threonine protein kinase; InterPro: IPR008790 This family of proteins contain poxvirus serine/threonine protein kinases, which are essential for phosphorylation of virion proteins during virion assembly. ; GO: 0004672 protein kinase activity, 0005524 ATP binding
Probab=93.08 E-value=0.19 Score=52.86 Aligned_cols=75 Identities=24% Similarity=0.323 Sum_probs=47.1
Q ss_pred EEEEEecCCcC---HHHHHH-hCC-CCCHHHHHHHHHHHHhhhhh---cc-cCceEeecCCCCcEEeCCC----------
Q 007541 102 IYVVFELMESD---LHQVIK-AND-DLTPEHYQFFLYQLLRGLKY---IH-TANVFHRDLKPKNILANAD---------- 162 (599)
Q Consensus 102 iylV~E~~~g~---L~~~i~-~~~-~lse~~i~~i~~QLl~aL~y---LH-s~gIvHrDLKP~NILv~~~---------- 162 (599)
-.+||+++.++ +..... ..| ..-.+-++.++.||+--.-- |- -.+.+|-||||+|||+-+.
T Consensus 246 nIIIfPLA~~Sadkv~~~~~~e~GF~s~~~YvkfifLQiaLLyikIYelp~c~nF~H~DLKPdNILiFds~~~i~I~~~~ 325 (434)
T PF05445_consen 246 NIIIFPLARCSADKVTESNAAELGFKSNVEYVKFIFLQIALLYIKIYELPCCTNFLHVDLKPDNILIFDSKEPIRIKFGN 325 (434)
T ss_pred cEEEEehhhcchhhcCHHHHHhcCchhHHHHHHHHHHHHHHHHeeeecCCCcceeeecccCcCcEEEecCCCceEEEECC
Confidence 35899987753 222111 222 22245678888887654321 22 3479999999999997432
Q ss_pred --------CceeeeccCccccc
Q 007541 163 --------CKLKICDFGLARVA 176 (599)
Q Consensus 163 --------~~lKL~DFGlA~~~ 176 (599)
-..+|.||.+|+..
T Consensus 326 ~~~vF~Epi~~~LnDFDfSqv~ 347 (434)
T PF05445_consen 326 RNYVFKEPIRCCLNDFDFSQVA 347 (434)
T ss_pred eEEEecccceeeecccCHHHhc
Confidence 23678889888765
No 495
>PHA03111 Ser/Thr kinase; Provisional
Probab=93.05 E-value=0.19 Score=52.56 Aligned_cols=76 Identities=26% Similarity=0.311 Sum_probs=47.6
Q ss_pred cEEEEEecCCcC---HHH-HHHhCCCCC-HHHHHHHHHHHHhhhhhc---c-cCceEeecCCCCcEEeCCC---------
Q 007541 101 DIYVVFELMESD---LHQ-VIKANDDLT-PEHYQFFLYQLLRGLKYI---H-TANVFHRDLKPKNILANAD--------- 162 (599)
Q Consensus 101 ~iylV~E~~~g~---L~~-~i~~~~~ls-e~~i~~i~~QLl~aL~yL---H-s~gIvHrDLKP~NILv~~~--------- 162 (599)
.-.+||+++.++ +.. -+...|-.+ .+-++.++.||+--.-.+ - -.+.+|-||||+||||-+.
T Consensus 249 GnIIIfPLArcSadkv~~~~~~e~GF~s~~~YikfifLQiaLLyikIYelp~c~nF~H~DLKPdNILiFds~~~i~I~~~ 328 (444)
T PHA03111 249 GNIIIFPLARCSADKVTEENAAELGFKSLVEYIKFIFLQIALLYIKIYELPCCDNFLHVDLKPDNILIFDSDEPISITLK 328 (444)
T ss_pred CcEEEEehhhcccccCCHHHHHHcCCccHHHHHHHHHHHHHHHHHhhhcCCCcceeeeccCCCCcEEEecCCCcEEEEEC
Confidence 345888887642 222 222233223 456788889987654222 2 3479999999999997543
Q ss_pred ---------CceeeeccCccccc
Q 007541 163 ---------CKLKICDFGLARVA 176 (599)
Q Consensus 163 ---------~~lKL~DFGlA~~~ 176 (599)
-+.+|.||.+|+..
T Consensus 329 ~~~~vF~Epi~~~LnDFDfSqv~ 351 (444)
T PHA03111 329 DATYVFNEPIKACLNDFDFSQVA 351 (444)
T ss_pred CeEEEeccchhhhhcccCHHHHc
Confidence 23667788877764
No 496
>PTZ00296 choline kinase; Provisional
Probab=92.56 E-value=1 Score=49.64 Aligned_cols=28 Identities=32% Similarity=0.665 Sum_probs=23.9
Q ss_pred ceEeecCCCCcEEeCCCCceeeeccCccc
Q 007541 146 NVFHRDLKPKNILANADCKLKICDFGLAR 174 (599)
Q Consensus 146 gIvHrDLKP~NILv~~~~~lKL~DFGlA~ 174 (599)
.++|.|+-+.|||.+.++ ++|+||..|.
T Consensus 285 VfCHNDl~~~NiL~~~~~-l~LIDfEYAg 312 (442)
T PTZ00296 285 VFCHNDLQENNIINTNKC-LRLIDFEYSG 312 (442)
T ss_pred eEEeCCCCccceeecCCC-EEEEeecccc
Confidence 589999999999986554 9999998773
No 497
>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]
Probab=92.54 E-value=0.21 Score=52.94 Aligned_cols=73 Identities=25% Similarity=0.366 Sum_probs=57.0
Q ss_pred CCccEEEEEecCCcCHHHHHHhCCCCCHHHHHHHHHHHHhhhhhcccC-ceEeecCCCCcEEeCCCCceeeeccCcccc
Q 007541 98 EFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTA-NVFHRDLKPKNILANADCKLKICDFGLARV 175 (599)
Q Consensus 98 ~~~~iylV~E~~~g~L~~~i~~~~~lse~~i~~i~~QLl~aL~yLHs~-gIvHrDLKP~NILv~~~~~lKL~DFGlA~~ 175 (599)
+..+.|++|++-++.|.-. +. ...+++..|+.+-+..+.-+..+ ..-||||.-.||||+ +|.|-|+||-++|.
T Consensus 297 e~~y~yl~~kdhgt~is~i-k~---~~~~e~lsff~s~~sil~~lekkf~fehrnlt~~niLId-~GnvtLIDfklsRl 370 (488)
T COG5072 297 ETLYLYLHFKDHGTPISII-KA---DRSEEELSFFWSCISILDILEKKFPFEHRNLTLDNILID-EGNVTLIDFKLSRL 370 (488)
T ss_pred CceEEEEEEecCCceeeee-ec---ccHHHHHHHHHHHHHHHhhhhhcCCcccccccccceeee-cCceEEEEeeeeec
Confidence 3457889999888766532 21 23567777888877777766655 589999999999999 99999999999985
No 498
>COG0510 ycfN Thiamine kinase and related kinases [Coenzyme transport and metabolism]
Probab=91.46 E-value=0.28 Score=50.43 Aligned_cols=49 Identities=27% Similarity=0.311 Sum_probs=39.5
Q ss_pred HHHHHHHHHHhhhhhcccC--ceEeecCCCCcEEeCCCCceeeeccCcccc
Q 007541 127 HYQFFLYQLLRGLKYIHTA--NVFHRDLKPKNILANADCKLKICDFGLARV 175 (599)
Q Consensus 127 ~i~~i~~QLl~aL~yLHs~--gIvHrDLKP~NILv~~~~~lKL~DFGlA~~ 175 (599)
.++..+..+-.++.-++.. -+||.|+.|+|+|.++.+.++|+||.-|..
T Consensus 133 ~~~~~~~~l~~~l~~~~~~~~v~cH~Dl~~~N~l~t~~~~l~LIDWEyAg~ 183 (269)
T COG0510 133 LLRKKLKELRRALEEVPKDDLVPCHNDLNPGNLLLTDKGGLFLIDWEYAGL 183 (269)
T ss_pred HHHHHHHHHHHHhhhcCCCceeeecCCCCccceEEcCCCcEEEEecccCCC
Confidence 4444566666777777766 589999999999999999999999998853
No 499
>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []. Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.
Probab=90.83 E-value=1.6 Score=45.33 Aligned_cols=75 Identities=15% Similarity=0.139 Sum_probs=42.5
Q ss_pred ceEEEEEEeecCceEEEEEEECCCCcEEEEEEecCcccChhhHHHHHHHHHHHHhcC--C-CCccccceeecCCCcCCCc
Q 007541 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLR--H-PDIVEIKHILLPPSRREFK 100 (599)
Q Consensus 24 rY~i~~~LG~G~~g~V~~a~d~~tg~~vAIK~i~~~~~~~~~~~~i~rEi~iL~~l~--H-pnIv~l~~v~~~~s~~~~~ 100 (599)
.-+-.+.|+-|.-..+|+.. .+++.+.||+-.. .....+..|..-|+.|. . -.+.+++.+.... .
T Consensus 18 ~i~~~~~v~GG~i~~a~~~~--~~~~~~FvK~~~~-----~~~~~f~~Ea~gL~~L~~~~~~~vP~vi~~G~~~-----~ 85 (288)
T PF03881_consen 18 KITSIEPVSGGDINEAYRLD--TDGGSYFVKVNSE-----SGRDMFEGEAEGLKALAEANPIRVPKVIAWGEYD-----D 85 (288)
T ss_dssp ---EEEEE--SSSSEEEEEE--TTS-EEEEEEEEG-----GGCCHHHHHHHHHHHHCHTTTSBS--EEEEEE-S-----S
T ss_pred ceeeeEecCCCChhheEEEE--CCCccEEEEecCh-----hhHHHHHHHHHHHHHHHhcCCCCCCeEEEEEeec-----C
Confidence 34556788889999999875 7788899997542 22335567888888884 2 2344555554322 1
Q ss_pred cEEEEEecCC
Q 007541 101 DIYVVFELME 110 (599)
Q Consensus 101 ~iylV~E~~~ 110 (599)
.-|||+|+++
T Consensus 86 ~~fLlle~l~ 95 (288)
T PF03881_consen 86 DAFLLLEFLE 95 (288)
T ss_dssp CCEEEEE---
T ss_pred CceEEEEeec
Confidence 2389999987
No 500
>smart00587 CHK ZnF_C4 abd HLH domain containing kinases domain. subfamily of choline kinases
Probab=90.02 E-value=0.46 Score=46.21 Aligned_cols=32 Identities=28% Similarity=0.357 Sum_probs=26.8
Q ss_pred ccCceEeecCCCCcEEeCCCC-----ceeeeccCccc
Q 007541 143 HTANVFHRDLKPKNILANADC-----KLKICDFGLAR 174 (599)
Q Consensus 143 Hs~gIvHrDLKP~NILv~~~~-----~lKL~DFGlA~ 174 (599)
+...++|||+.+.||+++.++ .+.|+||..++
T Consensus 118 ~~~vl~HgD~~~~N~~~~~~~~~~~~~~~liDfq~~~ 154 (196)
T smart00587 118 EFNVLNHGDLWANNIMFKYDDEGKPEDVALIDFQLSH 154 (196)
T ss_pred CceEEeeCCCCccceeeccCCCCCccceEEEecccCC
Confidence 345799999999999998654 58999999885
Done!