BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 007543
(599 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LYT2|PP287_ARATH Pentatricopeptide repeat-containing protein At3g59040
OS=Arabidopsis thaliana GN=At3g59040 PE=2 SV=2
Length = 583
Score = 791 bits (2044), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/569 (69%), Positives = 464/569 (81%), Gaps = 10/569 (1%)
Query: 1 MPQTLFLKPFISPSSINFSQQNVPVSPLDANFKVHRRVGVICMGMLAPRKFMQKRRKVEV 60
M Q + KPF+S S N SQ+ + + ++ K+ R V+CMGMLAPRKF+QKRRK+EV
Sbjct: 1 MSQAVIFKPFVSVPSSNHSQRKLQNNIINVGVKIQNRFRVVCMGMLAPRKFLQKRRKMEV 60
Query: 61 FKDAADEAGKKNWRRLMNQIEEVGSAVAVLRSERTRG-QPLPKDLVLGTLVRLKQLKKWN 119
FKDAADE +K WR LM +IE GSAV VLR +T G Q LP+DLVLGTLVR KQLKKWN
Sbjct: 61 FKDAADETDQKRWRGLMLEIESTGSAVPVLRQYKTDGDQGLPRDLVLGTLVRFKQLKKWN 120
Query: 120 VVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTAL 179
+VSE+LEWLR Q+WW+F+E+DFLMLITAYGK G+FN AE+VLS ++K G P+V+S+TAL
Sbjct: 121 LVSEILEWLRYQNWWNFSEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTAL 180
Query: 180 MEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEK 239
ME+YGRGG+ NAEAIFRRMQSSGP PSA+TYQIILK FVE +KFKEAEEVF TLLDE+K
Sbjct: 181 MESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKK 240
Query: 240 SPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK 299
SPLKPDQKM+HMMIYMYKKAG YEKARK+F+ M +GV QSTVTYNSLMSFET+YKEVSK
Sbjct: 241 SPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSK 300
Query: 300 IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFA 359
IYDQMQR+ +QPDVVSYALLI AYG+ARREEEAL+VFEEMLDAGVRPTHKAYNILLDAFA
Sbjct: 301 IYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFA 360
Query: 360 ISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVI 419
ISGMV+QA+TVFK MRRDR PD+ SYTTMLSAYVNASDMEGAEKFF+R+K DGF PN++
Sbjct: 361 ISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIV 420
Query: 420 TYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEM 479
TYGTLIKGYAK N++EKMME+Y+KMR++GIK NQTI TTIMDA G+ K+F SA+ WYKEM
Sbjct: 421 TYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEM 480
Query: 480 ESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVDEEDDDDDD 539
ESCG PPDQKAKN+LLSLA T DE EA EL G N + + DDD
Sbjct: 481 ESCGVPPDQKAKNVLLSLASTQDELEEAKELTGIRNET---------ATIIARVYGSDDD 531
Query: 540 DEDDDDNIYHDGDGDGDGDDNEDDAEETI 568
+E +D D + +GDD++DDA ET+
Sbjct: 532 EEGVEDISSESSDDEDEGDDDDDDARETV 560
>sp|Q9LYZ9|PP362_ARATH Pentatricopeptide repeat-containing protein At5g02860
OS=Arabidopsis thaliana GN=At5g02860 PE=2 SV=1
Length = 819
Score = 181 bits (460), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 113/428 (26%), Positives = 207/428 (48%), Gaps = 27/428 (6%)
Query: 105 VLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEM----DFLMLITAYGKQGDFNKAEKV 160
+L L L KK+++ +W Q D+ M ++I+ GK+G + A +
Sbjct: 138 LLAFLKGLGFHKKFDLALRAFDWFMKQK--DYQSMLDNSVVAIIISMLGKEGRVSSAANM 195
Query: 161 LSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVE 220
+ + + G++ V S+T+L+ A+ GRY+ A +F++M+ G +P+ +TY +IL +F
Sbjct: 196 FNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVF-- 253
Query: 221 ANKFKEAEEVFMTLLDEEKS-PLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQ 279
K +L+++ KS + PD ++ +I K+ +++A ++F M G
Sbjct: 254 -GKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSY 312
Query: 280 STVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVF 336
VTYN+L+ KE K+ ++M G P +V+Y LI+AY + +EA+ +
Sbjct: 313 DKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELK 372
Query: 337 EEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNA 396
+M + G +P Y LL F +G V+ A ++F+ MR C P+IC++ + Y N
Sbjct: 373 NQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNR 432
Query: 397 SDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIF 456
K F + G P+++T+ TL+ + + ++ ++ +M+ G P + F
Sbjct: 433 GKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETF 492
Query: 457 TTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS--------------LAKTAD 502
T++ AY + F+ A+ Y+ M G PD N +L+ LA+ D
Sbjct: 493 NTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMED 552
Query: 503 ERNEANEL 510
R + NEL
Sbjct: 553 GRCKPNEL 560
Score = 169 bits (427), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 111/388 (28%), Positives = 200/388 (51%), Gaps = 18/388 (4%)
Query: 119 NVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLS-FMNKKGYAP----SV 173
+V+SE+ E + + +E+ L + G F+ A + FM +K Y SV
Sbjct: 118 SVLSELFEPFKDKPESTSSEL--LAFLKGLGFHKKFDLALRAFDWFMKQKDYQSMLDNSV 175
Query: 174 VSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMT 233
V+ ++ G+ GR +A +F +Q G +Y ++ F + +++EA VF
Sbjct: 176 VA--IIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKK 233
Query: 234 LLDEEKSPLKPDQKMFHMMIYMYKKAGG-YEKARKLFALMAERGVQQSTVTYNSLMSF-- 290
+ E+ KP +++++ ++ K G + K L M G+ TYN+L++
Sbjct: 234 M---EEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCK 290
Query: 291 -ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHK 349
+ ++E ++++++M+ AG D V+Y L++ YGK+ R +EA+ V EM+ G P+
Sbjct: 291 RGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIV 350
Query: 350 AYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRL 409
YN L+ A+A GM+D+A + M PD+ +YTT+LS + A +E A F +
Sbjct: 351 TYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEM 410
Query: 410 KQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDF 469
+ G PN+ T+ IK Y +MM+I+D++ V G+ P+ + T++ +G+N
Sbjct: 411 RNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQN-GM 469
Query: 470 DSAVVW-YKEMESCGFPPDQKAKNILLS 496
DS V +KEM+ GF P+++ N L+S
Sbjct: 470 DSEVSGVFKEMKRAGFVPERETFNTLIS 497
Score = 167 bits (423), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 107/393 (27%), Positives = 192/393 (48%), Gaps = 7/393 (1%)
Query: 122 SEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALME 181
++V E ++ + + ++++ + L+ YGK +A KVL+ M G++PS+V++ +L+
Sbjct: 299 AQVFEEMK-AAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLIS 357
Query: 182 AYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP 241
AY R G A + +M G +P TY +L F A K + A +F + +
Sbjct: 358 AYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEM---RNAG 414
Query: 242 LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS-FETNY--KEVS 298
KP+ F+ I MY G + + K+F + G+ VT+N+L++ F N EVS
Sbjct: 415 CKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVS 474
Query: 299 KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAF 358
++ +M+RAG P+ ++ LI+AY + E+A+ V+ MLDAGV P YN +L A
Sbjct: 475 GVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAAL 534
Query: 359 AISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNV 418
A GM +Q+ V M RC P+ +Y ++L AY N ++ + P
Sbjct: 535 ARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRA 594
Query: 419 ITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKE 478
+ TL+ +K + L + + +++ G P+ T +++ YG+ + A
Sbjct: 595 VLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDY 654
Query: 479 MESCGFPPDQKAKNILLSLAKTADERNEANELL 511
M+ GF P N L+ + + + ++ E+L
Sbjct: 655 MKERGFTPSMATYNSLMYMHSRSADFGKSEEIL 687
Score = 154 bits (388), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 100/397 (25%), Positives = 189/397 (47%), Gaps = 7/397 (1%)
Query: 118 WNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHT 177
WN ++ ++E ++ + + LIT + +A +V M G++ V++
Sbjct: 260 WNKITSLVEKMKSDGIAP-DAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYN 318
Query: 178 ALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE 237
AL++ YG+ R K A + M +G PS +TY ++ + EA E+ + ++
Sbjct: 319 ALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEK 378
Query: 238 EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---Y 294
KPD + ++ +++AG E A +F M G + + T+N+ + N +
Sbjct: 379 GT---KPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKF 435
Query: 295 KEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNIL 354
E+ KI+D++ GL PD+V++ L+ +G+ + E VF+EM AG P + +N L
Sbjct: 436 TEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTL 495
Query: 355 LDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGF 414
+ A++ G +QA TV++ M +PD+ +Y T+L+A E +EK ++
Sbjct: 496 ISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRC 555
Query: 415 VPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVV 474
PN +TY +L+ YA + M + +++ I+P + T++ K A
Sbjct: 556 KPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAER 615
Query: 475 WYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 511
+ E++ GF PD N ++S+ +AN +L
Sbjct: 616 AFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVL 652
Score = 145 bits (365), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 99/392 (25%), Positives = 184/392 (46%), Gaps = 7/392 (1%)
Query: 143 MLITAYGKQGD-FNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQS 201
+++ +GK G +NK ++ M G AP ++ L+ RG ++ A +F M++
Sbjct: 248 VILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKA 307
Query: 202 SGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGG 261
+G +TY +L ++ ++++ KEA +V ++ + P ++ +I Y + G
Sbjct: 308 AGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMV---LNGFSPSIVTYNSLISAYARDGM 364
Query: 262 YEKARKLFALMAERGVQQSTVTYNSLMS-FETNYKEVS--KIYDQMQRAGLQPDVVSYAL 318
++A +L MAE+G + TY +L+S FE K S I+++M+ AG +P++ ++
Sbjct: 365 LDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNA 424
Query: 319 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 378
I YG + E + +F+E+ G+ P +N LL F +GM + VFK M+R
Sbjct: 425 FIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAG 484
Query: 379 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 438
P+ ++ T++SAY E A +RR+ G P++ TY T++ A+ E+
Sbjct: 485 FVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSE 544
Query: 439 EIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLA 498
++ +M KPN+ + +++ AY K+ +E+ S P L+ +
Sbjct: 545 KVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVC 604
Query: 499 KTADERNEANELLGNFNHPNNEPGINGLSISV 530
D EA P I L+ V
Sbjct: 605 SKCDLLPEAERAFSELKERGFSPDITTLNSMV 636
Score = 142 bits (357), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 87/381 (22%), Positives = 170/381 (44%), Gaps = 41/381 (10%)
Query: 137 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 196
N F I YG +G F + K+ +N G +P +V+ L+ +G+ G +F
Sbjct: 418 NICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVF 477
Query: 197 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 256
+ M+ +G P T+ ++ + F++A V+ +LD + + PD ++ ++
Sbjct: 478 KEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLD---AGVTPDLSTYNTVLAAL 534
Query: 257 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS------------------ 298
+ G +E++ K+ A M + + + +TY SL+ N KE+
Sbjct: 535 ARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRA 594
Query: 299 --------------------KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEE 338
+ + +++ G PD+ + +++ YG+ + +A V +
Sbjct: 595 VLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDY 654
Query: 339 MLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASD 398
M + G P+ YN L+ + S ++ + + + PDI SY T++ AY +
Sbjct: 655 MKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTR 714
Query: 399 MEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTT 458
M A + F ++ G VP+VITY T I YA + E+ + + M +G +PNQ + +
Sbjct: 715 MRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNS 774
Query: 459 IMDAYGKNKDFDSAVVWYKEM 479
I+D Y K D A ++ +++
Sbjct: 775 IVDGYCKLNRKDEAKLFVEDL 795
>sp|Q8RWS8|PP199_ARATH Pentatricopeptide repeat-containing protein At2g41720
OS=Arabidopsis thaliana GN=EMB2654 PE=2 SV=1
Length = 822
Score = 171 bits (433), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 105/412 (25%), Positives = 188/412 (45%), Gaps = 18/412 (4%)
Query: 129 RIQSW-WDFNEMDFLM-------------LITAYGKQGDFNKAEKVLSFMNKKGYAPSVV 174
R W W N MD ++ LI A G G++ +A +V M G P +V
Sbjct: 190 RAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLV 249
Query: 175 SHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTL 234
+H ++ AY G +Y A + F M+ + RP T+ II+ + + +A ++F ++
Sbjct: 250 THNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSM 309
Query: 235 LDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFE 291
E+++ +PD F ++++Y G E R +F M G++ + V+YN+LM +
Sbjct: 310 -REKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVH 368
Query: 292 TNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAY 351
+ +++ G+ PDVVSY L+N+YG++R+ +A VF M +P Y
Sbjct: 369 GMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTY 428
Query: 352 NILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQ 411
N L+DA+ +G + +A +F+ M +D P++ S T+L+A + + +
Sbjct: 429 NALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQS 488
Query: 412 DGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDS 471
G N Y + I Y LEK + +Y MR +K + FT ++ + +
Sbjct: 489 RGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPE 548
Query: 472 AVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGI 523
A+ + KEME P ++ + +L + EA + EP +
Sbjct: 549 AISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDV 600
Score = 133 bits (334), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 88/341 (25%), Positives = 164/341 (48%), Gaps = 8/341 (2%)
Query: 137 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 196
N + + L+ AY G A VL + + G P VVS+T L+ +YGR + A+ +F
Sbjct: 354 NIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVF 413
Query: 197 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 256
M+ +P+ +TY ++ + EA E+F + E+ +KP+ ++
Sbjct: 414 LMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQM---EQDGIKPNVVSVCTLLAAC 470
Query: 257 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDV 313
++ + + RG+ +T YNS + N E+ K +Y M++ ++ D
Sbjct: 471 SRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADS 530
Query: 314 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 373
V++ +LI+ + + EA++ +EM D + T + Y+ +L A++ G V +A ++F
Sbjct: 531 VTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQ 590
Query: 374 MRRDRCSPDICSYTTMLSAYVNASDMEG-AEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 432
M+ C PD+ +YT+ML AY NAS+ G A + F ++ +G P+ I L++ + K
Sbjct: 591 MKMAGCEPDVIAYTSMLHAY-NASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGG 649
Query: 433 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAV 473
+ + D MR I +F I A +++ A+
Sbjct: 650 QPSNVFVLMDLMREKEIPFTGAVFFEIFSACNTLQEWKRAI 690
Score = 124 bits (311), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/360 (22%), Positives = 180/360 (50%), Gaps = 8/360 (2%)
Query: 141 FLMLITAYGKQGDFNKAEKVLSFMNKKG--YAPSVVSHTALMEAYGRGGRYKNAEAIFRR 198
F ++I K G ++A + + M +K P VV+ T++M Y G +N A+F
Sbjct: 286 FNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEA 345
Query: 199 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 258
M + G +P+ ++Y ++ + A V L D +++ + PD + ++ Y +
Sbjct: 346 MVAEGLKPNIVSYNALMGAYAVHGMSGTALSV---LGDIKQNGIIPDVVSYTCLLNSYGR 402
Query: 259 AGGYEKARKLFALMAERGVQQSTVTYNSLM-SFETN--YKEVSKIYDQMQRAGLQPDVVS 315
+ KA+++F +M + + + VTYN+L+ ++ +N E +I+ QM++ G++P+VVS
Sbjct: 403 SRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVS 462
Query: 316 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 375
L+ A +++++ V G+ AYN + ++ + +++A +++ MR
Sbjct: 463 VCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMR 522
Query: 376 RDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLE 435
+ + D ++T ++S S A + + ++ Y +++ Y+K +
Sbjct: 523 KKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVT 582
Query: 436 KMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 495
+ I+++M++ G +P+ +T+++ AY ++ + A + EME+ G PD A + L+
Sbjct: 583 EAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALM 642
Score = 102 bits (255), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 88/396 (22%), Positives = 156/396 (39%), Gaps = 76/396 (19%)
Query: 139 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 198
+ + L+ +YG+ KA++V M K+ P+VV++ AL++AYG G A IFR+
Sbjct: 391 VSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQ 450
Query: 199 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 258
M+ G +P+ ++ + L ++ K+ V L + + + ++ I Y
Sbjct: 451 MEQDGIKPNVVS---VCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYIN 507
Query: 259 AGGYEKARKLFALMAERGVQQSTVTYNSLMSFET-------------------------- 292
A EKA L+ M ++ V+ +VT+ L+S
Sbjct: 508 AAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEV 567
Query: 293 ------------NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEML 340
E I++QM+ AG +PDV++Y +++AY + + +A +F EM
Sbjct: 568 YSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEME 627
Query: 341 DAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRR--------------DRC------- 379
G+ P A + L+ AF G + MR C
Sbjct: 628 ANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFSACNTLQEWK 687
Query: 380 --------------SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLI 425
S I ML + + +E K F ++ G N+ TY L+
Sbjct: 688 RAIDLIQMMDPYLPSLSIGLTNQMLHLFGKSGKVEAMMKLFYKIIASGVGINLKTYAILL 747
Query: 426 KGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMD 461
+ V N K +E+ + M GI+P+ ++ I+
Sbjct: 748 EHLLAVGNWRKYIEVLEWMSGAGIQPSNQMYRDIIS 783
Score = 98.6 bits (244), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/318 (22%), Positives = 138/318 (43%), Gaps = 43/318 (13%)
Query: 211 YQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFA 270
Y ++++L N +A +F + +K KPD + + +I + +AG + A L
Sbjct: 146 YNMMIRLHARHNWVDQARGLFFEM---QKWSCKPDAETYDALINAHGRAGQWRWAMNLMD 202
Query: 271 LMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKAR 327
M + S TYN+L++ N++E ++ +M G+ PD+V++ ++++AY R
Sbjct: 203 DMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGR 262
Query: 328 REEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR--CSPDICS 385
+ +AL+ FE M A VRP +NI++ + G QA +F MR R C PD
Sbjct: 263 QYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPD--- 319
Query: 386 YTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMR 445
V+T+ +++ Y+ +E +++ M
Sbjct: 320 --------------------------------VVTFTSIMHLYSVKGEIENCRAVFEAMV 347
Query: 446 VNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERN 505
G+KPN + +M AY + +A+ +++ G PD + LL+ + +
Sbjct: 348 AEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPG 407
Query: 506 EANELLGNFNHPNNEPGI 523
+A E+ +P +
Sbjct: 408 KAKEVFLMMRKERRKPNV 425
Score = 94.7 bits (234), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 129/284 (45%), Gaps = 6/284 (2%)
Query: 246 QKMFHMMIYMYKKAGGYEKARKLFALM-AERGVQQSTVTYNSLMSFETNYKEVSK---IY 301
+K F ++I + G E +F M ++ YN ++ + V + ++
Sbjct: 107 RKNFPVLIRELSRRGCIELCVNVFKWMKIQKNYCARNDIYNMMIRLHARHNWVDQARGLF 166
Query: 302 DQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAIS 361
+MQ+ +PD +Y LINA+G+A + A+ + ++ML A + P+ YN L++A S
Sbjct: 167 FEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSS 226
Query: 362 GMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITY 421
G +A V K M + PD+ ++ +LSAY + A +F +K P+ T+
Sbjct: 227 GNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTF 286
Query: 422 GTLIKGYAKVNNLEKMMEIYDKMRVNG--IKPNQTIFTTIMDAYGKNKDFDSAVVWYKEM 479
+I +K+ + +++++ MR +P+ FT+IM Y + ++ ++ M
Sbjct: 287 NIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAM 346
Query: 480 ESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGI 523
+ G P+ + N L+ A +LG+ P +
Sbjct: 347 VAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDV 390
Score = 62.4 bits (150), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 95/218 (43%), Gaps = 47/218 (21%)
Query: 144 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 203
++ AY KQG +AE + + M G P V+++T+++ AY ++ A +F M+++G
Sbjct: 571 VLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANG 630
Query: 204 PRPSALTYQIILKLFVEANKFKEAEEVF--MTLLDEEKSPL------------------K 243
P ++ +++ F NK + VF M L+ E++ P K
Sbjct: 631 IEPDSIACSALMRAF---NKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFSACNTLQEWK 687
Query: 244 PDQKMFHMM---------------IYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM 288
+ MM ++++ K+G E KLF + GV + TY L+
Sbjct: 688 RAIDLIQMMDPYLPSLSIGLTNQMLHLFGKSGKVEAMMKLFYKIIASGVGINLKTYAILL 747
Query: 289 SFET---NYKEVSKIYDQMQRAGLQP------DVVSYA 317
N+++ ++ + M AG+QP D++S+
Sbjct: 748 EHLLAVGNWRKYIEVLEWMSGAGIQPSNQMYRDIISFG 785
>sp|Q9SIC9|PP178_ARATH Pentatricopeptide repeat-containing protein At2g31400,
chloroplastic OS=Arabidopsis thaliana GN=At2g31400 PE=2
SV=1
Length = 918
Score = 170 bits (430), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 101/357 (28%), Positives = 187/357 (52%), Gaps = 9/357 (2%)
Query: 144 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 203
+I+ G+ G A+++ GY +V + +AL+ AYGR G ++ A ++F M+ G
Sbjct: 239 MISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYG 298
Query: 204 PRPSALTYQIILKLFVEAN-KFKEAEEVFMTLLDE-EKSPLKPDQKMFHMMIYMYKKAGG 261
RP+ +TY ++ + +FK+ + F DE +++ ++PD+ F+ ++ + + G
Sbjct: 299 LRPNLVTYNAVIDACGKGGMEFKQVAKFF----DEMQRNGVQPDRITFNSLLAVCSRGGL 354
Query: 262 YEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYAL 318
+E AR LF M R ++Q +YN+L+ ++ +I QM + P+VVSY+
Sbjct: 355 WEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYST 414
Query: 319 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 378
+I+ + KA R +EAL +F EM G+ +YN LL + G ++A + + M
Sbjct: 415 VIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVG 474
Query: 379 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 438
D+ +Y +L Y + +K F +K++ +PN++TY TLI GY+K ++ M
Sbjct: 475 IKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAM 534
Query: 439 EIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 495
EI+ + + G++ + +++ ++DA KN SAV EM G P+ N ++
Sbjct: 535 EIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSII 591
Score = 112 bits (279), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 126/253 (49%), Gaps = 4/253 (1%)
Query: 247 KMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQ 303
K+ MI + G A+++F G + +++L+S ++E +++
Sbjct: 234 KLASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNS 293
Query: 304 MQRAGLQPDVVSYALLINAYGKARREEEALA-VFEEMLDAGVRPTHKAYNILLDAFAISG 362
M+ GL+P++V+Y +I+A GK E + +A F+EM GV+P +N LL + G
Sbjct: 294 MKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGG 353
Query: 363 MVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYG 422
+ + AR +F M R D+ SY T+L A M+ A + ++ +PNV++Y
Sbjct: 354 LWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYS 413
Query: 423 TLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESC 482
T+I G+AK ++ + ++ +MR GI ++ + T++ Y K + A+ +EM S
Sbjct: 414 TVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASV 473
Query: 483 GFPPDQKAKNILL 495
G D N LL
Sbjct: 474 GIKKDVVTYNALL 486
Score = 91.3 bits (225), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/345 (24%), Positives = 150/345 (43%), Gaps = 53/345 (15%)
Query: 137 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 196
N + + +I + K G F++A + M G A VS+ L+ Y + GR + A I
Sbjct: 408 NVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDIL 467
Query: 197 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 256
R M S G + +TY +L + + K+ E ++VF + E + P+ + +I Y
Sbjct: 468 REMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREH---VLPNLLTYSTLIDGY 524
Query: 257 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSY 316
K G Y++A ++F + + AGL+ DVV Y
Sbjct: 525 SKGGLYKEAMEIF--------------------------------REFKSAGLRADVVLY 552
Query: 317 ALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRR 376
+ LI+A K A+++ +EM G+ P YN ++DAF S +D++
Sbjct: 553 SALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRS--------A 604
Query: 377 DRCSPDICSYTTMLSAYVNASDMEGAE--KFFRRLKQDGFVPNVITYGTLIKGYAKVNNL 434
D + +++ SA ++ EG + F +L + N T +G + L
Sbjct: 605 DYSNGGSLPFSS--SALSALTETEGNRVIQLFGQLTTES---NNRTTKDCEEG---MQEL 656
Query: 435 EKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEM 479
++E++ KM IKPN F+ I++A + F+ A + +E+
Sbjct: 657 SCILEVFRKMHQLEIKPNVVTFSAILNACSRCNSFEDASMLLEEL 701
>sp|Q8L844|PP413_ARATH Pentatricopeptide repeat-containing protein At5g42310,
mitochondrial OS=Arabidopsis thaliana GN=At5g42310 PE=2
SV=1
Length = 709
Score = 169 bits (428), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 108/425 (25%), Positives = 208/425 (48%), Gaps = 14/425 (3%)
Query: 78 NQIEEVGSAVAVLRSERTRGQPLPKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFN 137
N IE+ + +A +R + + + LV+ +L R ++ ++ E R D
Sbjct: 211 NDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIER-----DKL 265
Query: 138 EMDFLM---LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEA 194
E+D + +I + K GD +KA ++L G + + +++ A GR AEA
Sbjct: 266 ELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEA 325
Query: 195 IFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIY 254
+F ++ SG +P Y +LK +V+ K+AE + + EK + PD+ + ++I
Sbjct: 326 LFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEM---EKRGVSPDEHTYSLLID 382
Query: 255 MYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQP 311
Y AG +E AR + M VQ ++ ++ L++ +++ ++ +M+ G++P
Sbjct: 383 AYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKP 442
Query: 312 DVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVF 371
D Y ++I+ +GK + A+ F+ ML G+ P +N L+D G A +F
Sbjct: 443 DRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMF 502
Query: 372 KCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKV 431
+ M R C P +Y M+++Y + + ++ ++K G +PNV+T+ TL+ Y K
Sbjct: 503 EAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKS 562
Query: 432 NNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAK 491
+E ++M+ G+KP+ T++ +++AY + + AV ++ M S G P A
Sbjct: 563 GRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLAL 622
Query: 492 NILLS 496
N L++
Sbjct: 623 NSLIN 627
Score = 152 bits (384), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 90/356 (25%), Positives = 175/356 (49%), Gaps = 6/356 (1%)
Query: 144 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 203
L+ Y K G AE ++S M K+G +P +++ L++AY GR+++A + + M++
Sbjct: 345 LLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGD 404
Query: 204 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 263
+P++ + +L F + E ++ F L + + +KPD++ ++++I + K +
Sbjct: 405 VQPNSFVFSRLLAGFRDRG---EWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLD 461
Query: 264 KARKLFALMAERGVQQSTVTYNSLMSFETNYKE---VSKIYDQMQRAGLQPDVVSYALLI 320
A F M G++ VT+N+L+ + ++++ M+R G P +Y ++I
Sbjct: 462 HAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMI 521
Query: 321 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 380
N+YG R ++ + +M G+ P + L+D + SG + A + M+
Sbjct: 522 NSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLK 581
Query: 381 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 440
P Y +++AY E A FR + DG P+++ +LI + + + +
Sbjct: 582 PSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAV 641
Query: 441 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 496
M+ NG+KP+ +TT+M A + F V Y+EM G PD+KA+++L S
Sbjct: 642 LQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKPDRKARSMLRS 697
Score = 124 bits (311), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 103/447 (23%), Positives = 186/447 (41%), Gaps = 81/447 (18%)
Query: 124 VLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAY 183
V+ WL+ + E+ + +LI A G+ +A F+ + + +++ AL+ A
Sbjct: 153 VVSWLQKHNLCFSYELLYSILIHALGRSEKLYEA-----FLLSQKQTLTPLTYNALIGAC 207
Query: 184 GRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE-EKSPL 242
R + A + +M+ G + + Y ++++ +NK + + L E E+ L
Sbjct: 208 ARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSV--MLLRLYKEIERDKL 265
Query: 243 KPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS------------- 289
+ D ++ + +I + K+G KA +L + G+ T T S++S
Sbjct: 266 ELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEA 325
Query: 290 -FE----TNYKEVSKIYD--------------------QMQRAGLQPDVVSYALLINAYG 324
FE + K ++ Y+ +M++ G+ PD +Y+LLI+AY
Sbjct: 326 LFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYV 385
Query: 325 KARREEEA-----------------------------------LAVFEEMLDAGVRPTHK 349
A R E A V +EM GV+P +
Sbjct: 386 NAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQ 445
Query: 350 AYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRL 409
YN+++D F +D A T F M + PD ++ T++ + AE+ F +
Sbjct: 446 FYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAM 505
Query: 410 KQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDF 469
++ G +P TY +I Y + M + KM+ GI PN TT++D YGK+ F
Sbjct: 506 ERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRF 565
Query: 470 DSAVVWYKEMESCGFPPDQKAKNILLS 496
+ A+ +EM+S G P N L++
Sbjct: 566 NDAIECLEEMKSVGLKPSSTMYNALIN 592
Score = 90.1 bits (222), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 121/254 (47%), Gaps = 8/254 (3%)
Query: 143 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 202
++I +GK + A M +G P V+ L++ + + GR+ AE +F M+
Sbjct: 449 VVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERR 508
Query: 203 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP-LKPDQKMFHMMIYMYKKAGG 261
G P A TY I++ + + ++ + + LL + KS + P+ ++ +Y K+G
Sbjct: 509 GCLPCATTYNIMINSYGDQERWDDMKR----LLGKMKSQGILPNVVTHTTLVDVYGKSGR 564
Query: 262 YEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYAL 318
+ A + M G++ S+ YN+L++ ++ + M GL+P +++
Sbjct: 565 FNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNS 624
Query: 319 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 378
LINA+G+ RR+ EA AV + M + GV+P Y L+ A + V++ M
Sbjct: 625 LINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSG 684
Query: 379 CSPDICSYTTMLSA 392
C PD + + + SA
Sbjct: 685 CKPDRKARSMLRSA 698
Score = 60.8 bits (146), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 78/189 (41%), Gaps = 41/189 (21%)
Query: 137 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 196
N + L+ YGK G FN A + L M G PS + AL+ AY + G + A F
Sbjct: 548 NVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAF 607
Query: 197 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 256
R M S G +PS L ++ F E + D + F ++ Y
Sbjct: 608 RVMTSDGLKPSLLALNSLINAFGEDRR---------------------DAEAFAVLQY-- 644
Query: 257 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFET---NYKEVSKIYDQMQRAGLQPDV 313
M E GV+ VTY +LM +++V +Y++M +G +PD
Sbjct: 645 ---------------MKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKPDR 689
Query: 314 VSYALLINA 322
+ ++L +A
Sbjct: 690 KARSMLRSA 698
>sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710
OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1
Length = 747
Score = 167 bits (422), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 116/457 (25%), Positives = 218/457 (47%), Gaps = 14/457 (3%)
Query: 71 KNWRRLMNQIEEVGSAVAVLRSERTRGQPLPKDLVLGTLVRLKQLKKW--NVVSEVLEWL 128
K++ RL + I++ S V + ++ L + VL +R K+ + NV E+LE
Sbjct: 142 KSYSRL-SLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQ 200
Query: 129 RIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGR 188
+ + +N +LI + G+ + A + M KG P+VV++ L++ Y + +
Sbjct: 201 VSPNVFTYN-----ILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRK 255
Query: 189 YKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKM 248
+ + R M G P+ ++Y +++ + KE V L + + D+
Sbjct: 256 IDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKE---VSFVLTEMNRRGYSLDEVT 312
Query: 249 FHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQ 305
++ +I Y K G + +A + A M G+ S +TY SL M N + DQM+
Sbjct: 313 YNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMR 372
Query: 306 RAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVD 365
GL P+ +Y L++ + + EA V EM D G P+ YN L++ ++G ++
Sbjct: 373 VRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKME 432
Query: 366 QARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLI 425
A V + M+ SPD+ SY+T+LS + + D++ A + R + + G P+ ITY +LI
Sbjct: 433 DAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLI 492
Query: 426 KGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFP 485
+G+ + ++ ++Y++M G+ P++ +T +++AY D + A+ + EM G
Sbjct: 493 QGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVL 552
Query: 486 PDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPG 522
PD ++L++ EA LL + + P
Sbjct: 553 PDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPS 589
Score = 142 bits (358), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 109/453 (24%), Positives = 216/453 (47%), Gaps = 31/453 (6%)
Query: 79 QIEEVGSAVAVLRSERTRG-QP--LPKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWD 135
++ ++ +LRS +G +P + ++V+ L R ++K+ VS VL + + +
Sbjct: 252 KLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKE---VSFVLTEMN-RRGYS 307
Query: 136 FNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAI 195
+E+ + LI Y K+G+F++A + + M + G PSV+++T+L+ + + G A
Sbjct: 308 LDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEF 367
Query: 196 FRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYM 255
+M+ G P+ TY ++ F + EA V + D + P ++ +I
Sbjct: 368 LDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMND---NGFSPSVVTYNALING 424
Query: 256 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS-FETNYK--EVSKIYDQMQRAGLQPD 312
+ G E A + M E+G+ V+Y++++S F +Y E ++ +M G++PD
Sbjct: 425 HCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPD 484
Query: 313 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 372
++Y+ LI + + RR +EA ++EEML G+ P Y L++A+ + G +++A +
Sbjct: 485 TITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHN 544
Query: 373 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLI------- 425
M PD+ +Y+ +++ S A++ +L + VP+ +TY TLI
Sbjct: 545 EMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIE 604
Query: 426 --------KGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYK 477
KG+ + + ++++ M KP+ T + ++ + + D A YK
Sbjct: 605 FKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYK 664
Query: 478 EMESCGFPPDQKAKNILLSLAKTADERNEANEL 510
EM GF +++L K + + NEL
Sbjct: 665 EMVKSGFLLHTVT---VIALVKALHKEGKVNEL 694
Score = 126 bits (317), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 90/372 (24%), Positives = 175/372 (47%), Gaps = 26/372 (6%)
Query: 89 VLRSERTRGQPLPKDLVLGTLVR-LKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITA 147
V+ +E R P + +L+ + + N E L+ +R++ NE + L+
Sbjct: 331 VMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCP-NERTYTTLVDG 389
Query: 148 YGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPS 207
+ ++G N+A +VL MN G++PSVV++ AL+ + G+ ++A A+ M+ G P
Sbjct: 390 FSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPD 449
Query: 208 ALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARK 267
++Y +L F + EA V ++++ +KPD + +I + + ++A
Sbjct: 450 VVSYSTVLSGFCRSYDVDEALRVKREMVEK---GIKPDTITYSSLIQGFCEQRRTKEACD 506
Query: 268 LFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYG 324
L+ M G+ TY +L+ E + ++ +++++M G+ PDVV+Y++LIN
Sbjct: 507 LYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLN 566
Query: 325 KARREEEALAVFEEMLDAGVRPTHKAYNILLD---------------AFAISGMVDQART 369
K R EA + ++ P+ Y+ L++ F + GM+ +A
Sbjct: 567 KQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQ 626
Query: 370 VFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGY- 428
VF+ M PD +Y M+ + A D+ A ++ + + GF+ + +T L+K
Sbjct: 627 VFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALH 686
Query: 429 --AKVNNLEKMM 438
KVN L ++
Sbjct: 687 KEGKVNELNSVI 698
Score = 123 bits (309), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 87/348 (25%), Positives = 152/348 (43%), Gaps = 42/348 (12%)
Query: 179 LMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANK-FKEAEEVFMTLLDE 237
++++Y R A +I Q+ G P L+Y +L + + + AE VF +L+
Sbjct: 140 VVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLES 199
Query: 238 EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL---------- 287
+ S P+ ++++I + AG + A LF M +G + VTYN+L
Sbjct: 200 QVS---PNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKI 256
Query: 288 ----------------------------MSFETNYKEVSKIYDQMQRAGLQPDVVSYALL 319
+ E KEVS + +M R G D V+Y L
Sbjct: 257 DDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTL 316
Query: 320 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 379
I Y K +AL + EML G+ P+ Y L+ + +G +++A MR
Sbjct: 317 IKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGL 376
Query: 380 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 439
P+ +YTT++ + M A + R + +GF P+V+TY LI G+ +E +
Sbjct: 377 CPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIA 436
Query: 440 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 487
+ + M+ G+ P+ ++T++ + ++ D D A+ +EM G PD
Sbjct: 437 VLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPD 484
Score = 99.8 bits (247), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 117/273 (42%), Gaps = 43/273 (15%)
Query: 305 QRAGLQPDVVSYALLINAYGKARREEE-ALAVFEEMLDAGVRPTHKAYNILLDAFAISGM 363
Q G P V+SY +++A +++R A VF+EML++ V P YNIL+ F +G
Sbjct: 161 QAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGN 220
Query: 364 VDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVI---- 419
+D A T+F M C P++ +Y T++ Y ++ K R + G PN+I
Sbjct: 221 IDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNV 280
Query: 420 -------------------------------TYGTLIKGYAKVNNLEKMMEIYDKMRVNG 448
TY TLIKGY K N + + ++ +M +G
Sbjct: 281 VINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHG 340
Query: 449 IKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEAN 508
+ P+ +T+++ + K + + A+ + +M G P+++ L+ NEA
Sbjct: 341 LTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAY 400
Query: 509 ELLGNFNHPNNEPG-------INGLSISVDEED 534
+L N P ING ++ ED
Sbjct: 401 RVLREMNDNGFSPSVVTYNALINGHCVTGKMED 433
>sp|Q9CAN5|PPR98_ARATH Pentatricopeptide repeat-containing protein At1g63080,
mitochondrial OS=Arabidopsis thaliana GN=At1g63080 PE=2
SV=1
Length = 614
Score = 166 bits (421), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 107/441 (24%), Positives = 206/441 (46%), Gaps = 37/441 (8%)
Query: 90 LRSERTRGQPLPKDLVLGTLVR-LKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAY 148
L E + +P P + L+ + ++KK+++V E + I N + ++I
Sbjct: 52 LFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGV-SHNLYTYNIMINCL 110
Query: 149 GKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSA 208
++ + A +L M K GY PS+V+ +L+ + G R A A+ +M G +P
Sbjct: 111 CRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDT 170
Query: 209 LTYQIILKLFVEANKFKEA-------------------------------EEVFMTLLDE 237
+T+ ++ + NK EA ++ + LL++
Sbjct: 171 VTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNK 230
Query: 238 -EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNY-- 294
EK ++ D ++ +I K + A LF M +G++ TY+SL+S NY
Sbjct: 231 MEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGR 290
Query: 295 -KEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNI 353
+ S++ M + P+VV++ LI+A+ K + EA +F+EM+ + P YN
Sbjct: 291 WSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNS 350
Query: 354 LLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDG 413
L++ F + +D+A+ +F M C PD+ +Y T+++ + A + + FR + + G
Sbjct: 351 LINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRG 410
Query: 414 FVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAV 473
V N +TY TLI G+ + ++ + ++ +M +G+ PN + T++D KN + A+
Sbjct: 411 LVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAM 470
Query: 474 VWYKEMESCGFPPDQKAKNIL 494
V ++ ++ PD NI+
Sbjct: 471 VVFEYLQKSKMEPDIYTYNIM 491
Score = 149 bits (377), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 103/403 (25%), Positives = 194/403 (48%), Gaps = 26/403 (6%)
Query: 88 AVLRSERTRGQPLPKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITA 147
AV+ RG+P DL L L +++K + ++V+ + + I +
Sbjct: 210 AVINGLCKRGEP---DLALNLL---NKMEKGKIEADVVIYSTV--------------IDS 249
Query: 148 YGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPS 207
K + A + + M+ KG P V ++++L+ GR+ +A + M P+
Sbjct: 250 LCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPN 309
Query: 208 ALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARK 267
+T+ ++ F + K EAE++F ++ + + P+ ++ +I + ++A++
Sbjct: 310 VVTFNSLIDAFAKEGKLIEAEKLFDEMI---QRSIDPNIVTYNSLINGFCMHDRLDEAQQ 366
Query: 268 LFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYALLINAYG 324
+F LM + VTYN+L++ K+V +++ M R GL + V+Y LI+ +
Sbjct: 367 IFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFF 426
Query: 325 KARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDIC 384
+A + A VF++M+ GV P YN LLD +G +++A VF+ +++ + PDI
Sbjct: 427 QASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIY 486
Query: 385 SYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKM 444
+Y M A +E F L G P+VI Y T+I G+ K E+ ++ KM
Sbjct: 487 TYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKM 546
Query: 445 RVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 487
+ +G P+ + T++ A+ ++ D ++ KEM SC F D
Sbjct: 547 KEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGD 589
Score = 104 bits (260), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/398 (22%), Positives = 164/398 (41%), Gaps = 76/398 (19%)
Query: 171 PSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEV 230
PS+V + L+ A + ++ + +M+ G + TY I++ ++ A +
Sbjct: 63 PSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAI 122
Query: 231 FMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS- 289
++ K P + ++ + +A L M E G Q TVT+ +L+
Sbjct: 123 LGKMM---KLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHG 179
Query: 290 -FETN-YKEVSKIYDQMQRAGLQPDVVSYALLIN-------------------------- 321
F+ N E + ++M G QPD+V+Y +IN
Sbjct: 180 LFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEAD 239
Query: 322 ---------AYGKARREEEALAVFEEMLDAGVRP---THKA------------------- 350
+ K R ++AL +F EM + G+RP T+ +
Sbjct: 240 VVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLS 299
Query: 351 -------------YNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNAS 397
+N L+DAFA G + +A +F M + P+I +Y ++++ +
Sbjct: 300 DMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHD 359
Query: 398 DMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFT 457
++ A++ F + +P+V+TY TLI G+ K + ME++ M G+ N +T
Sbjct: 360 RLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYT 419
Query: 458 TIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 495
T++ + + D D+A + +K+M S G P+ N LL
Sbjct: 420 TLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLL 457
Score = 95.1 bits (235), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/322 (22%), Positives = 131/322 (40%), Gaps = 10/322 (3%)
Query: 195 IFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMF--HMM 252
+F M S P PS + + +L + KF + E+ L ++ ++M
Sbjct: 52 LFGEMVKSRPFPSIVEFSKLLSAIAKMKKFD-----LVISFGEKMEILGVSHNLYTYNIM 106
Query: 253 IYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGL 309
I + A + M + G S VT NSL++ + +S+ + DQM G
Sbjct: 107 INCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGY 166
Query: 310 QPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQART 369
QPD V++ L++ + + EA+A+ E M+ G +P Y +++ G D A
Sbjct: 167 QPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALN 226
Query: 370 VFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYA 429
+ M + + D+ Y+T++ + ++ A F + G P+V TY +LI
Sbjct: 227 LLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLC 286
Query: 430 KVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQK 489
+ M I PN F +++DA+ K A + EM P+
Sbjct: 287 NYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIV 346
Query: 490 AKNILLSLAKTADERNEANELL 511
N L++ D +EA ++
Sbjct: 347 TYNSLINGFCMHDRLDEAQQIF 368
Score = 86.7 bits (213), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 120/264 (45%), Gaps = 3/264 (1%)
Query: 263 EKARKLFALMAERGVQQSTVTYNSLMSFETNYKE---VSKIYDQMQRAGLQPDVVSYALL 319
++A LF M + S V ++ L+S K+ V ++M+ G+ ++ +Y ++
Sbjct: 47 DEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIM 106
Query: 320 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 379
IN + + ALA+ +M+ G P+ N LL+ F + +A + M
Sbjct: 107 INCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGY 166
Query: 380 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 439
PD ++TT++ + A R+ G P+++TYG +I G K + +
Sbjct: 167 QPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALN 226
Query: 440 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAK 499
+ +KM I+ + I++T++D+ K + D A+ + EM++ G PD + L+S
Sbjct: 227 LLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLC 286
Query: 500 TADERNEANELLGNFNHPNNEPGI 523
++A+ LL + P +
Sbjct: 287 NYGRWSDASRLLSDMLERKINPNV 310
Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/146 (21%), Positives = 60/146 (41%), Gaps = 3/146 (2%)
Query: 364 VDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGT 423
+D+A +F M + R P I ++ +LSA + F +++ G N+ TY
Sbjct: 46 LDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNI 105
Query: 424 LIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCG 483
+I + + L + I KM G P+ ++++ + AV +M G
Sbjct: 106 MINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 165
Query: 484 FPPDQKAKNILLSLAKTADERNEANE 509
+ PD +L + N+A+E
Sbjct: 166 YQPDTVT---FTTLVHGLFQHNKASE 188
>sp|Q9FIT7|PP442_ARATH Pentatricopeptide repeat-containing protein At5g61990,
mitochondrial OS=Arabidopsis thaliana GN=At5g61990 PE=2
SV=1
Length = 974
Score = 166 bits (420), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 95/348 (27%), Positives = 172/348 (49%), Gaps = 6/348 (1%)
Query: 144 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 203
LI Y ++ + + ++L M K+ S ++ +++ G A I + M +SG
Sbjct: 388 LIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASG 447
Query: 204 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 263
RP+ + Y ++K F++ ++F +A V L + ++ + PD ++ +I KA +
Sbjct: 448 CRPNVVIYTTLIKTFLQNSRFGDAMRV---LKEMKEQGIAPDIFCYNSLIIGLSKAKRMD 504
Query: 264 KARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLI 320
+AR M E G++ + TY + +S + + K +M+ G+ P+ V LI
Sbjct: 505 EARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLI 564
Query: 321 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 380
N Y K + EA + + M+D G+ K Y +L++ + VD A +F+ MR +
Sbjct: 565 NEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIA 624
Query: 381 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 440
PD+ SY +++ + +M+ A F + ++G PNVI Y L+ G+ + +EK E+
Sbjct: 625 PDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKEL 684
Query: 441 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQ 488
D+M V G+ PN + TI+D Y K+ D A + EM+ G PD
Sbjct: 685 LDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDS 732
Score = 136 bits (342), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 93/384 (24%), Positives = 170/384 (44%), Gaps = 44/384 (11%)
Query: 137 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 196
N + I+ Y + +F A+K + M + G P+ V T L+ Y + G+ A + +
Sbjct: 521 NAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAY 580
Query: 197 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 256
R M G A TY +++ + +K +AEE+F + + PD + ++I +
Sbjct: 581 RSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREM---RGKGIAPDVFSYGVLINGF 637
Query: 257 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDV 313
K G +KA +F M E G+ + + YN L+ E+ K + D+M GL P+
Sbjct: 638 SKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNA 697
Query: 314 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 373
V+Y +I+ Y K+ EA +F+EM G+ P Y L+D V++A T+F
Sbjct: 698 VTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGT 757
Query: 374 MRRDRCS--------------------------------------PDICSYTTMLSAYVN 395
++ S P+ +Y M+
Sbjct: 758 NKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCK 817
Query: 396 ASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTI 455
++E A++ F +++ +P VITY +L+ GY K+ +M ++D+ GI+P+ +
Sbjct: 818 EGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIM 877
Query: 456 FTTIMDAYGKNKDFDSAVVWYKEM 479
++ I++A+ K A+V +M
Sbjct: 878 YSVIINAFLKEGMTTKALVLVDQM 901
Score = 123 bits (309), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 98/404 (24%), Positives = 182/404 (45%), Gaps = 22/404 (5%)
Query: 40 VICMGMLAPRKFMQKRRKVEV---FKDAADEA---GKKNWRRLMNQI---EEVGSAVAVL 90
V+C G++ ++ +K + +E ++ D+ K + LMN + ++V A +
Sbjct: 558 VLCTGLI--NEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIF 615
Query: 91 RSERTRGQPLPKDLVLGTLVR-LKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYG 149
R R +G P G L+ +L S + + + ++ N + + ML+ +
Sbjct: 616 REMRGKGIA-PDVFSYGVLINGFSKLGNMQKASSIFDEM-VEEGLTPNVIIYNMLLGGFC 673
Query: 150 KQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSAL 209
+ G+ KA+++L M+ KG P+ V++ +++ Y + G A +F M+ G P +
Sbjct: 674 RSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSF 733
Query: 210 TYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLF 269
Y ++ N + A +F T S P + + + K E +L
Sbjct: 734 VYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLM 793
Query: 270 ALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKA 326
+R + + VTYN ++ + E N + +++ QMQ A L P V++Y L+N Y K
Sbjct: 794 DGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKM 853
Query: 327 RREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRR-----DRCSP 381
R E VF+E + AG+ P H Y+++++AF GM +A + M D C
Sbjct: 854 GRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKL 913
Query: 382 DICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLI 425
I + +LS + +ME AEK + + ++P+ T LI
Sbjct: 914 SISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELI 957
Score = 115 bits (289), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 90/392 (22%), Positives = 169/392 (43%), Gaps = 33/392 (8%)
Query: 111 RLKQLKKWNVVSEVLEWLRIQSWWD-----------FNEMDFLMLITAYGKQGDFNKAEK 159
RL + K ++ +L W R+ +WD F+ + MLI A+ + G+ +
Sbjct: 185 RLSRCKV--LLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKD 242
Query: 160 VLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFV 219
VL F +K + TA + G A + M G P TY +++
Sbjct: 243 VL-FKTEKEF------RTATLNVDG-------ALKLKESMICKGLVPLKYTYDVLIDGLC 288
Query: 220 EANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQ 279
+ + ++A+ + L++ + + D + ++I K + A+ L M G+
Sbjct: 289 KIKRLEDAKSL---LVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINI 345
Query: 280 STVTYNS---LMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVF 336
Y+ +MS E ++ ++D M +GL P +YA LI Y + + + +
Sbjct: 346 KPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELL 405
Query: 337 EEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNA 396
EM + + Y ++ SG +D A + K M C P++ YTT++ ++
Sbjct: 406 VEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQN 465
Query: 397 SDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIF 456
S A + + +K+ G P++ Y +LI G +K +++ +M NG+KPN +
Sbjct: 466 SRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTY 525
Query: 457 TTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQ 488
+ Y + +F SA + KEM CG P++
Sbjct: 526 GAFISGYIEASEFASADKYVKEMRECGVLPNK 557
Score = 95.5 bits (236), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/358 (24%), Positives = 155/358 (43%), Gaps = 37/358 (10%)
Query: 193 EAIFRRMQSSG----PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKM 248
EA+F S G PR S +++L + N+ +V+ +++ + D K
Sbjct: 169 EAVFVFSSSMGLELVPRLSRC--KVLLDALLRWNRLDLFWDVYKGMVERN---VVFDVKT 223
Query: 249 FHMMIYMYKKAGGYE---------------------KARKLFALMAERGVQQSTVTYNSL 287
+HM+I + +AG + A KL M +G+ TY+ L
Sbjct: 224 YHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVL 283
Query: 288 MSFETNYKEV---SKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGV 344
+ K + + +M G+ D +Y+LLI+ K R + A + EM+ G+
Sbjct: 284 IDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGI 343
Query: 345 RPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEK 404
Y+ + + G++++A+ +F M P +Y +++ Y ++ +
Sbjct: 344 NIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYE 403
Query: 405 FFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYG 464
+K+ V + TYGT++KG +L+ I +M +G +PN I+TT++ +
Sbjct: 404 LLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFL 463
Query: 465 KNKDFDSAVVWYKEMESCGFPPDQKAKNIL---LSLAKTADE-RNEANELLGNFNHPN 518
+N F A+ KEM+ G PD N L LS AK DE R+ E++ N PN
Sbjct: 464 QNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPN 521
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 98/246 (39%), Gaps = 34/246 (13%)
Query: 260 GGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALL 319
G +EKA + M ER + V ++S++ + G D V + +L
Sbjct: 111 GSFEKALSVVERMIERNWPVAEV-WSSIVRCSQEF------------VGKSDDGVLFGIL 157
Query: 320 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 379
+ Y EEA+ VF + + P +LLDA +D V+K M
Sbjct: 158 FDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNV 217
Query: 380 SPDICSYTTMLSAYVNASDME-------GAEKFFR----------RLKQD----GFVPNV 418
D+ +Y ++ A+ A +++ EK FR +LK+ G VP
Sbjct: 218 VFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLK 277
Query: 419 ITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKE 478
TY LI G K+ LE + +M G+ + ++ ++D K ++ D+A E
Sbjct: 278 YTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHE 337
Query: 479 MESCGF 484
M S G
Sbjct: 338 MVSHGI 343
>sp|Q9SXD1|PPR91_ARATH Pentatricopeptide repeat-containing protein At1g62670,
mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=2
SV=2
Length = 630
Score = 165 bits (417), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 115/478 (24%), Positives = 220/478 (46%), Gaps = 46/478 (9%)
Query: 86 AVAVLRSERTRGQPLPKDLVLGTLVR-LKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLML 144
AVA L E + +P P + L+ + ++ K++VV + E ++ N + +L
Sbjct: 65 AVA-LFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQ-NLGIPHNHYTYSIL 122
Query: 145 ITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGP 204
I + ++ A VL M K GY P++V+ ++L+ Y R A A+ +M +G
Sbjct: 123 INCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGY 182
Query: 205 RPSALTYQIILKLFVEANKFKEAEEVFMTLLDE--------------------------- 237
+P+ +T+ ++ NK EA M L+D
Sbjct: 183 QPNTVTFNTLIHGLFLHNKASEA----MALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTD 238
Query: 238 ---------EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM 288
E+ L+P +++ +I K + A LF M +G++ + VTY+SL+
Sbjct: 239 LAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLI 298
Query: 289 SFETNY---KEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVR 345
S NY + S++ M + PDV +++ LI+A+ K + EA +++EM+ +
Sbjct: 299 SCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSID 358
Query: 346 PTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKF 405
P+ Y+ L++ F + +D+A+ +F+ M C PD+ +Y T++ + +E +
Sbjct: 359 PSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEV 418
Query: 406 FRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGK 465
FR + Q G V N +TY LI+G + + + EI+ +M +G+ PN + T++D K
Sbjct: 419 FREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCK 478
Query: 466 NKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGI 523
N + A+V ++ ++ P NI++ A + + +L N + +P +
Sbjct: 479 NGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDV 536
Score = 154 bits (389), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 94/372 (25%), Positives = 177/372 (47%), Gaps = 6/372 (1%)
Query: 143 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 202
+++ K+GD + A +L+ M + P V+ + +++ + +A +F+ M++
Sbjct: 226 VVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETK 285
Query: 203 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 262
G RP+ +TY ++ ++ +A + +++ + + PD F +I + K G
Sbjct: 286 GIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERK---INPDVFTFSALIDAFVKEGKL 342
Query: 263 EKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALL 319
+A KL+ M +R + S VTY+SL+ E ++++ M PDVV+Y L
Sbjct: 343 VEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTL 402
Query: 320 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 379
I + K +R EE + VF EM G+ YNIL+ +G D A+ +FK M D
Sbjct: 403 IKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGV 462
Query: 380 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 439
P+I +Y T+L +E A F L++ P + TY +I+G K +E +
Sbjct: 463 PPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWD 522
Query: 440 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAK 499
++ + + G+KP+ + T++ + + + A +KEM+ G P+ N L+
Sbjct: 523 LFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARL 582
Query: 500 TADERNEANELL 511
+R + EL+
Sbjct: 583 RDGDREASAELI 594
Score = 152 bits (384), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 92/357 (25%), Positives = 173/357 (48%), Gaps = 6/357 (1%)
Query: 144 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 203
+I K + A + M KG P+VV++++L+ GR+ +A + M
Sbjct: 262 IIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERK 321
Query: 204 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 263
P T+ ++ FV+ K EAE+++ ++ K + P + +I + +
Sbjct: 322 INPDVFTFSALIDAFVKEGKLVEAEKLYDEMV---KRSIDPSIVTYSSLINGFCMHDRLD 378
Query: 264 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLI 320
+A+++F M + VTYN+L+ YK V + ++ +M + GL + V+Y +LI
Sbjct: 379 EAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILI 438
Query: 321 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 380
+A + A +F+EM+ GV P YN LLD +G +++A VF+ ++R +
Sbjct: 439 QGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKME 498
Query: 381 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 440
P I +Y M+ A +E F L G P+V+ Y T+I G+ + + E+ +
Sbjct: 499 PTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADAL 558
Query: 441 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSL 497
+ +M+ +G PN + T++ A ++ D +++ KEM SCGF D ++ ++
Sbjct: 559 FKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNM 615
Score = 136 bits (342), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 166/315 (52%), Gaps = 6/315 (1%)
Query: 137 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 196
N + + LI+ G ++ A ++LS M ++ P V + +AL++A+ + G+ AE ++
Sbjct: 290 NVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLY 349
Query: 197 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 256
M PS +TY ++ F ++ EA+++F ++ + PD ++ +I +
Sbjct: 350 DEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKH---CFPDVVTYNTLIKGF 406
Query: 257 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMS--FETNYKEVSK-IYDQMQRAGLQPDV 313
K E+ ++F M++RG+ +TVTYN L+ F+ ++++ I+ +M G+ P++
Sbjct: 407 CKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNI 466
Query: 314 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 373
++Y L++ K + E+A+ VFE + + + PT YNI+++ +G V+ +F
Sbjct: 467 MTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCN 526
Query: 374 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 433
+ PD+ +Y TM+S + E A+ F+ +K+DG +PN Y TLI+ + +
Sbjct: 527 LSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGD 586
Query: 434 LEKMMEIYDKMRVNG 448
E E+ +MR G
Sbjct: 587 REASAELIKEMRSCG 601
Score = 90.9 bits (224), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 120/270 (44%), Gaps = 3/270 (1%)
Query: 265 ARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLIN 321
A LF M + S + ++ L+S + V + +QMQ G+ + +Y++LIN
Sbjct: 65 AVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILIN 124
Query: 322 AYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSP 381
+ + + ALAV +M+ G P + LL+ + S + +A + M P
Sbjct: 125 CFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQP 184
Query: 382 DICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIY 441
+ ++ T++ + A R+ G P+++TYG ++ G K + + +
Sbjct: 185 NTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLL 244
Query: 442 DKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTA 501
+KM ++P I+ TI+D K K D A+ +KEME+ G P+ + L+S
Sbjct: 245 NKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNY 304
Query: 502 DERNEANELLGNFNHPNNEPGINGLSISVD 531
++A+ LL + P + S +D
Sbjct: 305 GRWSDASRLLSDMIERKINPDVFTFSALID 334
Score = 75.1 bits (183), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 111/239 (46%), Gaps = 10/239 (4%)
Query: 100 LPKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDF--NEMDFLMLITAYGKQGDFNKA 157
P + TL+ K K+ V E +E R S N + + +LI + GD + A
Sbjct: 393 FPDVVTYNTLI--KGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMA 450
Query: 158 EKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKL 217
+++ M G P+++++ L++ + G+ + A +F +Q S P+ TY I+++
Sbjct: 451 QEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEG 510
Query: 218 FVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGV 277
+A K ++ ++F L +KPD ++ MI + + G E+A LF M E G
Sbjct: 511 MCKAGKVEDGWDLFCNL---SLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGT 567
Query: 278 QQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEAL 333
++ YN+L+ + + + +++ +M+ G D + L+ N R ++ L
Sbjct: 568 LPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDGRLDKSFL 626
Score = 52.8 bits (125), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/177 (21%), Positives = 73/177 (41%)
Query: 364 VDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGT 423
+D A +F M + R P I ++ +LSA + + +++ G N TY
Sbjct: 62 LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 121
Query: 424 LIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCG 483
LI + + + L + + KM G +PN +++++ Y +K AV +M G
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181
Query: 484 FPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVDEEDDDDDDD 540
+ P+ N L+ ++ +EA L+ +P + + V+ D D
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTD 238
>sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900
OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1
Length = 598
Score = 162 bits (411), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 106/393 (26%), Positives = 175/393 (44%), Gaps = 39/393 (9%)
Query: 144 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 203
LI + + G KA K+L + G P V+++ ++ Y + G NA ++ RM S
Sbjct: 143 LIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVS- 201
Query: 204 PRPSALTYQIILKLFVEANKFKEAEEVF-------------------------------M 232
P +TY IL+ ++ K K+A EV M
Sbjct: 202 --PDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAM 259
Query: 233 TLLDEEKS-PLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL---M 288
LLDE + PD +++++ K G ++A K M G Q + +T+N + M
Sbjct: 260 KLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSM 319
Query: 289 SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTH 348
+ + K+ M R G P VV++ +LIN + A+ + E+M G +P
Sbjct: 320 CSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNS 379
Query: 349 KAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRR 408
+YN LL F +D+A + M C PDI +Y TML+A +E A + +
Sbjct: 380 LSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQ 439
Query: 409 LKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKD 468
L G P +ITY T+I G AK K +++ D+MR +KP+ +++++ +
Sbjct: 440 LSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGK 499
Query: 469 FDSAVVWYKEMESCGFPPDQKAKN-ILLSLAKT 500
D A+ ++ E E G P+ N I+L L K+
Sbjct: 500 VDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKS 532
Score = 140 bits (353), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 92/364 (25%), Positives = 169/364 (46%), Gaps = 6/364 (1%)
Query: 151 QGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALT 210
G +A +VL M ++ P V+++T L+EA R +A + M+ G P +T
Sbjct: 217 SGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVT 276
Query: 211 YQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFA 270
Y +++ + + EA + L D S +P+ ++++ G + A KL A
Sbjct: 277 YNVLVNGICKEGRLDEAIKF---LNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLA 333
Query: 271 LMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLINAYGKAR 327
M +G S VT+N L++F + + I ++M + G QP+ +SY L++ + K +
Sbjct: 334 DMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEK 393
Query: 328 REEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYT 387
+ + A+ E M+ G P YN +L A G V+ A + + CSP + +Y
Sbjct: 394 KMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYN 453
Query: 388 TMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVN 447
T++ A A K ++ P+ ITY +L+ G ++ +++ ++ + +
Sbjct: 454 TVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERM 513
Query: 448 GIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEA 507
GI+PN F +IM K++ D A+ + M + G P++ + IL+ EA
Sbjct: 514 GIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEA 573
Query: 508 NELL 511
ELL
Sbjct: 574 LELL 577
Score = 126 bits (316), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 94/384 (24%), Positives = 164/384 (42%), Gaps = 17/384 (4%)
Query: 149 GKQGDFNKAEKVLSFMNKKGYAPSVVSHTAL--------MEAYGRGGRYKNAEAIFRRMQ 200
G+ F S N G+ SV S AL + R G + M
Sbjct: 70 GRAQKFETLSSGYSNSNGNGHYSSVNSSFALEDVESNNHLRQMVRTGELEEGFKFLENMV 129
Query: 201 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 260
G P + +++ F K ++A ++ L E S PD +++MI Y KAG
Sbjct: 130 YHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEIL---EGSGAVPDVITYNVMISGYCKAG 186
Query: 261 GYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYA 317
A + M+ V VTYN+++ + K+ ++ D+M + PDV++Y
Sbjct: 187 EINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYT 243
Query: 318 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 377
+LI A + A+ + +EM D G P YN+L++ G +D+A M
Sbjct: 244 ILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSS 303
Query: 378 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 437
C P++ ++ +L + + AEK + + GF P+V+T+ LI + L +
Sbjct: 304 GCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRA 363
Query: 438 MEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSL 497
++I +KM +G +PN + ++ + K K D A+ + + M S G PD N +L+
Sbjct: 364 IDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTA 423
Query: 498 AKTADERNEANELLGNFNHPNNEP 521
+ +A E+L + P
Sbjct: 424 LCKDGKVEDAVEILNQLSSKGCSP 447
Score = 114 bits (285), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/406 (21%), Positives = 177/406 (43%), Gaps = 45/406 (11%)
Query: 82 EVGSAVAVLRSERTRGQPLPKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDF 141
E+ +A++VL + + +L +L +LK+ EVL+ + + + + + +
Sbjct: 187 EINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQ---AMEVLDRMLQRDCYP-DVITY 242
Query: 142 LMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQS 201
+LI A + A K+L M +G P VV++ L+ + GR A M S
Sbjct: 243 TILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPS 302
Query: 202 SGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGG 261
SG +P+ +T+ IIL+ ++ +AE++ +L + P F+++I + G
Sbjct: 303 SGCQPNVITHNIILRSMCSTGRWMDAEKLLADML---RKGFSPSVVTFNILINFLCRKGL 359
Query: 262 YEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRA---GLQPDVVSYAL 318
+A + M + G Q ++++YN L+ K++ + + ++R G PD+V+Y
Sbjct: 360 LGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNT 419
Query: 319 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 378
++ A K + E+A+ + ++ G P YN ++D A +G +A + MR
Sbjct: 420 MLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKD 479
Query: 379 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVIT------------------ 420
PD +Y++++ ++ A KFF ++ G PN +T
Sbjct: 480 LKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAI 539
Query: 421 -----------------YGTLIKGYAKVNNLEKMMEIYDKMRVNGI 449
Y LI+G A ++ +E+ +++ G+
Sbjct: 540 DFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGL 585
Score = 93.2 bits (230), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 108/233 (46%), Gaps = 3/233 (1%)
Query: 299 KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAF 358
K + M G PD++ LI + + + +A + E + +G P YN+++ +
Sbjct: 123 KFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGY 182
Query: 359 AISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNV 418
+G ++ A +V R SPD+ +Y T+L + ++ ++ A + R+ Q P+V
Sbjct: 183 CKAGEINNALSVLD---RMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDV 239
Query: 419 ITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKE 478
ITY LI+ + + + M++ D+MR G P+ + +++ K D A+ + +
Sbjct: 240 ITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLND 299
Query: 479 MESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 531
M S G P+ NI+L + +A +LL + P + +I ++
Sbjct: 300 MPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILIN 352
>sp|Q9LQ16|PPR94_ARATH Pentatricopeptide repeat-containing protein At1g62910
OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1
Length = 632
Score = 162 bits (410), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 97/357 (27%), Positives = 178/357 (49%), Gaps = 6/357 (1%)
Query: 144 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 203
+I K + A + + M+ KG P V ++++L+ GR+ +A + M
Sbjct: 264 IIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERK 323
Query: 204 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 263
P+ +T+ ++ FV+ K EAE+++ ++ K + PD + +I + +
Sbjct: 324 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMI---KRSIDPDIFTYSSLINGFCMHDRLD 380
Query: 264 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLI 320
+A+ +F LM + + VTY++L+ K V + ++ +M + GL + V+Y LI
Sbjct: 381 EAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLI 440
Query: 321 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 380
+ + +AR + A VF++M+ GV P YNILLD +G + +A VF+ ++R
Sbjct: 441 HGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTME 500
Query: 381 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 440
PDI +Y M+ A +E + F L G PNVI Y T+I G+ + + E+ +
Sbjct: 501 PDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSL 560
Query: 441 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSL 497
KM+ +G PN + T++ A ++ D +++ KEM SCGF D ++ ++
Sbjct: 561 LKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNM 617
Score = 158 bits (399), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 112/487 (22%), Positives = 226/487 (46%), Gaps = 40/487 (8%)
Query: 74 RRLMNQIEEVGSAVAVLRSERTRGQPLPKDLVLGTLVR-LKQLKKWNVVSEVLEWLRIQS 132
R ++ I +V AV L + + +P P + L+ + ++ K+ +V + E ++Q+
Sbjct: 55 RNRLSDIIKVDDAVD-LFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGE--QMQT 111
Query: 133 WWDFNEM-DFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKN 191
+++ + + I + ++ + A VL+ M K GY P +V+ ++L+ Y R +
Sbjct: 112 LGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISD 171
Query: 192 AEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAE----------------------- 228
A A+ +M G +P T+ ++ NK EA
Sbjct: 172 AVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVN 231
Query: 229 --------EVFMTLLDE-EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQ 279
++ ++LL + EK ++ D +++ +I K + A LF M +G++
Sbjct: 232 GLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRP 291
Query: 280 STVTYNSLMSFETNY---KEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVF 336
TY+SL+S NY + S++ M + P+VV+++ LI+A+ K + EA ++
Sbjct: 292 DVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLY 351
Query: 337 EEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNA 396
+EM+ + P Y+ L++ F + +D+A+ +F+ M C P++ +Y+T++ + A
Sbjct: 352 DEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKA 411
Query: 397 SDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIF 456
+E + FR + Q G V N +TY TLI G+ + + + ++ +M G+ PN +
Sbjct: 412 KRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTY 471
Query: 457 TTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNH 516
++D KN A+V ++ ++ PD NI++ A + + EL N +
Sbjct: 472 NILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSL 531
Query: 517 PNNEPGI 523
P +
Sbjct: 532 KGVSPNV 538
Score = 126 bits (317), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 81/363 (22%), Positives = 171/363 (47%), Gaps = 9/363 (2%)
Query: 155 NKAEKVLSF---MNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTY 211
NKA + ++ M ++G P +V++ ++ + G A ++ ++M+ + Y
Sbjct: 202 NKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIY 261
Query: 212 QIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFAL 271
I+ K+K ++ + + ++PD + +I G + A +L +
Sbjct: 262 NTIIDGLC---KYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSD 318
Query: 272 MAERGVQQSTVTYNSLM-SF--ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARR 328
M ER + + VT+++L+ +F E E K+YD+M + + PD+ +Y+ LIN + R
Sbjct: 319 MIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR 378
Query: 329 EEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTT 388
+EA +FE M+ P Y+ L+ F + V++ +F+ M + + +YTT
Sbjct: 379 LDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTT 438
Query: 389 MLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNG 448
++ + A D + A+ F+++ G PN++TY L+ G K L K M +++ ++ +
Sbjct: 439 LIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRST 498
Query: 449 IKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEAN 508
++P+ + +++ K + + + G P+ A N ++S + EA+
Sbjct: 499 MEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEAD 558
Query: 509 ELL 511
LL
Sbjct: 559 SLL 561
Score = 120 bits (302), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 156/309 (50%), Gaps = 7/309 (2%)
Query: 117 KWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSH 176
+W+ S +L + I+ + N + F LI A+ K+G +AEK+ M K+ P + ++
Sbjct: 308 RWSDASRLLSDM-IERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY 366
Query: 177 TALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLD 236
++L+ + R A+ +F M S P+ +TY ++K F +A + +E E+F +
Sbjct: 367 SSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREM-- 424
Query: 237 EEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKE 296
+ L + + +I+ + +A + A+ +F M GV + +TYN L+ +
Sbjct: 425 -SQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGK 483
Query: 297 VSK---IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNI 353
++K +++ +QR+ ++PD+ +Y ++I KA + E+ +F + GV P AYN
Sbjct: 484 LAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNT 543
Query: 354 LLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDG 413
++ F G ++A ++ K M+ D P+ +Y T++ A + D E + + + ++ G
Sbjct: 544 MISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCG 603
Query: 414 FVPNVITYG 422
F + T G
Sbjct: 604 FAGDASTIG 612
Score = 98.6 bits (244), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 123/270 (45%), Gaps = 3/270 (1%)
Query: 265 ARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLIN 321
A LF M + S V +N L+S ++ V + +QMQ G+ D+ +Y++ IN
Sbjct: 67 AVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFIN 126
Query: 322 AYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSP 381
+ + + ALAV +M+ G P + LL+ + S + A + M P
Sbjct: 127 CFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKP 186
Query: 382 DICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIY 441
D ++TT++ + A ++ Q G P+++TYGT++ G K +++ + +
Sbjct: 187 DTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLL 246
Query: 442 DKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTA 501
KM I+ + I+ TI+D K K D A+ + EM++ G PD + L+S
Sbjct: 247 KKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNY 306
Query: 502 DERNEANELLGNFNHPNNEPGINGLSISVD 531
++A+ LL + P + S +D
Sbjct: 307 GRWSDASRLLSDMIERKINPNVVTFSALID 336
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 78/170 (45%)
Query: 318 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 377
+L N + ++A+ +F +M+ + P+ +N LL A A + ++ + M+
Sbjct: 53 ILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTL 112
Query: 378 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 437
S D+ +Y+ ++ + S + A ++ + G+ P+++T +L+ GY +
Sbjct: 113 GISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDA 172
Query: 438 MEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 487
+ + D+M G KP+ FTT++ + AV +M G PD
Sbjct: 173 VALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPD 222
>sp|O64624|PP163_ARATH Pentatricopeptide repeat-containing protein At2g18940
OS=Arabidopsis thaliana GN=At2g18940 PE=2 SV=1
Length = 822
Score = 161 bits (408), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 122/428 (28%), Positives = 202/428 (47%), Gaps = 24/428 (5%)
Query: 95 TRGQPLPKDLVLGTLVR-LKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLML---ITAYGK 150
+ + L DLV +LV+ L W + EWL + S ++D ++ + G+
Sbjct: 130 VKSELLRTDLV--SLVKGLDDSGHWERAVFLFEWLVLSSNSGALKLDHQVIEIFVRILGR 187
Query: 151 QGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALT 210
+ ++ A K+L + + Y V ++T ++ AY R G+Y+ A +F RM+ GP P+ +T
Sbjct: 188 ESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVT 247
Query: 211 YQIILKLFVEANKFKEAEEVFMTLLDEEKSP-LKPDQKMFHMMIYMYKKAGGYEKARKLF 269
Y +IL +F K + + +LDE +S LK D+ ++ + G +A++ F
Sbjct: 248 YNVILDVF---GKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFF 304
Query: 270 ALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKA 326
A + G + TVTYN+L+ Y E + +M+ D V+Y L+ AY +A
Sbjct: 305 AELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRA 364
Query: 327 RREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSY 386
+EA V E M GV P Y ++DA+ +G D+A +F M+ C P+ C+Y
Sbjct: 365 GFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTY 424
Query: 387 TTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLI-----KGYAKVNNLEKMMEIY 441
+LS S K +K +G PN T+ T++ KG K N ++
Sbjct: 425 NAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVN-----RVF 479
Query: 442 DKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL-SLAKT 500
+M+ G +P++ F T++ AYG+ A Y EM GF N LL +LA+
Sbjct: 480 REMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARK 539
Query: 501 ADERNEAN 508
D R+ N
Sbjct: 540 GDWRSGEN 547
Score = 144 bits (362), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 108/447 (24%), Positives = 194/447 (43%), Gaps = 42/447 (9%)
Query: 113 KQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPS 172
K + W + VL+ +R + F+E +++A ++G +A++ + + GY P
Sbjct: 257 KMGRSWRKILGVLDEMRSKGL-KFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPG 315
Query: 173 VVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFM 232
V++ AL++ +G+ G Y A ++ + M+ + ++TY ++ +V A KEA V
Sbjct: 316 TVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIE 375
Query: 233 TLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF-- 290
+ K + P+ + +I Y KAG ++A KLF M E G +T TYN+++S
Sbjct: 376 MM---TKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLG 432
Query: 291 ---------------ETNY---------------------KEVSKIYDQMQRAGLQPDVV 314
++N K V++++ +M+ G +PD
Sbjct: 433 KKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRD 492
Query: 315 SYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCM 374
++ LI+AYG+ E +A ++ EM AG YN LL+A A G V M
Sbjct: 493 TFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDM 552
Query: 375 RRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNL 434
+ P SY+ ML Y + G E+ R+K+ P+ + TL+ K L
Sbjct: 553 KSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRAL 612
Query: 435 EKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNIL 494
+ + +G KP+ IF +++ + +N +D A + + G PD N L
Sbjct: 613 AGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSL 672
Query: 495 LSLAKTADERNEANELLGNFNHPNNEP 521
+ + E +A E+L +P
Sbjct: 673 MDMYVRRGECWKAEEILKTLEKSQLKP 699
Score = 116 bits (291), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 76/361 (21%), Positives = 156/361 (43%), Gaps = 46/361 (12%)
Query: 141 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 200
F LI+AYG+ G A K+ M + G+ V ++ AL+ A R G +++ E + M+
Sbjct: 494 FNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMK 553
Query: 201 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 260
S G +P+ +Y ++L+ + + + E + + ++ + P + ++ K
Sbjct: 554 SKGFKPTETSYSLMLQCYAKGGNYLGIERIENRI---KEGQIFPSWMLLRTLLLANFKCR 610
Query: 261 GYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYA 317
+ + F L + G + V +NS++S T Y + I + ++ GL PD+V+
Sbjct: 611 ALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVT-- 668
Query: 318 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 377
YN L+D + G +A + K + +
Sbjct: 669 ---------------------------------YNSLMDMYVRRGECWKAEEILKTLEKS 695
Query: 378 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 437
+ PD+ SY T++ + M+ A + + + G P + TY T + GY + ++
Sbjct: 696 QLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEI 755
Query: 438 MEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPP---DQKAKNIL 494
++ + M N +PN+ F ++D Y + + A+ + ++++ F P DQ + +
Sbjct: 756 EDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKIKT--FDPCFDDQSIQRLA 813
Query: 495 L 495
L
Sbjct: 814 L 814
>sp|Q9S7Q2|PP124_ARATH Pentatricopeptide repeat-containing protein At1g74850,
chloroplastic OS=Arabidopsis thaliana GN=PTAC2 PE=2 SV=1
Length = 862
Score = 161 bits (408), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 99/386 (25%), Positives = 182/386 (47%), Gaps = 6/386 (1%)
Query: 118 WNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHT 177
W + ++++ Q W NE + ++I+ G++G +K +V M +G + SV S+T
Sbjct: 121 WQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYT 180
Query: 178 ALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE 237
AL+ AYGR GRY+ + + RM++ PS LTY ++ + E + +
Sbjct: 181 ALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGL--DWEGLLGLFAEM 238
Query: 238 EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEV 297
++PD ++ ++ G ++A +F M + G+ TY+ L+ + +
Sbjct: 239 RHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRL 298
Query: 298 SKIYD---QMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNIL 354
K+ D +M G PD+ SY +L+ AY K+ +EA+ VF +M AG P Y++L
Sbjct: 299 EKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVL 358
Query: 355 LDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGF 414
L+ F SG D R +F M+ PD +Y ++ + + F + ++
Sbjct: 359 LNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENI 418
Query: 415 VPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVV 474
P++ TY +I K E +I M N I P+ +T +++A+G+ ++ A+V
Sbjct: 419 EPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALV 478
Query: 475 WYKEMESCGFPPD-QKAKNILLSLAK 499
+ M G P + ++L S A+
Sbjct: 479 AFNTMHEVGSNPSIETFHSLLYSFAR 504
Score = 139 bits (351), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 93/399 (23%), Positives = 185/399 (46%), Gaps = 8/399 (2%)
Query: 144 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 203
L++A +G ++AE V MN G P + +++ L+E +G+ R + + M S G
Sbjct: 253 LLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGG 312
Query: 204 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 263
P +Y ++L+ + ++ KEA VF + + + P+ + +++ ++ ++G Y+
Sbjct: 313 SLPDITSYNVLLEAYAKSGSIKEAMGVFHQM---QAAGCTPNANTYSVLLNLFGQSGRYD 369
Query: 264 KARKLFALMAERGVQQSTVTYNSLMSF--ETNY-KEVSKIYDQMQRAGLQPDVVSYALLI 320
R+LF M TYN L+ E Y KEV ++ M ++PD+ +Y +I
Sbjct: 370 DVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGII 429
Query: 321 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 380
A GK E+A + + M + P+ KAY +++AF + + ++A F M +
Sbjct: 430 FACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSN 489
Query: 381 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 440
P I ++ ++L ++ ++ +E RL G N T+ I+ Y + E+ ++
Sbjct: 490 PSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKT 549
Query: 441 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKT 500
Y M + P++ ++ Y + D ++EM++ P ++L++
Sbjct: 550 YVDMEKSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCMMLAVYGK 609
Query: 501 ADERNEANELLGNF--NHPNNEPGINGLSISVDEEDDDD 537
+ ++ NELL N +N + G I D +DD +
Sbjct: 610 TERWDDVNELLEEMLSNRVSNIHQVIGQMIKGDYDDDSN 648
Score = 136 bits (343), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 87/351 (24%), Positives = 168/351 (47%), Gaps = 16/351 (4%)
Query: 187 GRYK-NAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP---- 241
G+Y + E++ ++ S PR S I K + N F + F D ++S
Sbjct: 70 GKYSYDVESLINKLSSLPPRGSIARCLDIFKNKLSLNDFALVFKEFAGRGDWQRSLRLFK 129
Query: 242 -------LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM-SFETN 293
KP++ ++ +MI + + G +K ++F M +GV +S +Y +L+ ++ N
Sbjct: 130 YMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRN 189
Query: 294 --YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEAL-AVFEEMLDAGVRPTHKA 350
Y+ ++ D+M+ + P +++Y +INA + + E L +F EM G++P
Sbjct: 190 GRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVT 249
Query: 351 YNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLK 410
YN LL A AI G+ D+A VF+ M PD+ +Y+ ++ + +E +
Sbjct: 250 YNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMA 309
Query: 411 QDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFD 470
G +P++ +Y L++ YAK ++++ M ++ +M+ G PN ++ +++ +G++ +D
Sbjct: 310 SGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYD 369
Query: 471 SAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEP 521
+ EM+S PD NIL+ + E L + N EP
Sbjct: 370 DVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEP 420
Score = 133 bits (335), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 96/408 (23%), Positives = 189/408 (46%), Gaps = 39/408 (9%)
Query: 141 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGR-YKNAEAIFRRM 199
+ LI AYG+ G + + ++L M + +PS++++ ++ A RGG ++ +F M
Sbjct: 179 YTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEM 238
Query: 200 QSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP--------------LK-- 243
+ G +P +TY +L EAE VF T+ D P L+
Sbjct: 239 RHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRL 298
Query: 244 ----------------PDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL 287
PD +++++ Y K+G ++A +F M G + TY+ L
Sbjct: 299 EKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVL 358
Query: 288 MSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGV 344
++ Y +V +++ +M+ + PD +Y +LI +G+ +E + +F +M++ +
Sbjct: 359 LNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENI 418
Query: 345 RPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEK 404
P + Y ++ A G+ + AR + + M + P +YT ++ A+ A+ E A
Sbjct: 419 EPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALV 478
Query: 405 FFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYG 464
F + + G P++ T+ +L+ +A+ +++ I ++ +GI N+ F ++AY
Sbjct: 479 AFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYK 538
Query: 465 KNKDFDSAVVWYKEMESCGFPPDQKAKNILLSL---AKTADERNEANE 509
+ F+ AV Y +ME PD++ +LS+ A+ DE E E
Sbjct: 539 QGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARLVDECREQFE 586
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/210 (21%), Positives = 90/210 (42%), Gaps = 7/210 (3%)
Query: 141 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 200
F L+ ++ + G ++E +LS + G + + A +EAY +GG+++ A + M+
Sbjct: 495 FHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDME 554
Query: 201 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 260
S P T + +L ++ A E E F + + S + P + MM+ +Y K
Sbjct: 555 KSRCDPDERTLEAVLSVYSFARLVDECREQFEEM---KASDILPSIMCYCMMLAVYGKTE 611
Query: 261 GYEKARKLFALMAERGVQQSTVTYNSLMSF----ETNYKEVSKIYDQMQRAGLQPDVVSY 316
++ +L M V ++ ++N++ V + D++ G + Y
Sbjct: 612 RWDDVNELLEEMLSNRVSNIHQVIGQMIKGDYDDDSNWQIVEYVLDKLNSEGCGLGIRFY 671
Query: 317 ALLINAYGKARREEEALAVFEEMLDAGVRP 346
L++A ++E A V E G+ P
Sbjct: 672 NALLDALWWLGQKERAARVLNEATKRGLFP 701
>sp|Q9FMQ1|PP376_ARATH Pentatricopeptide repeat-containing protein At5g12100,
mitochondrial OS=Arabidopsis thaliana GN=At5g12100 PE=2
SV=1
Length = 816
Score = 161 bits (407), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 107/375 (28%), Positives = 185/375 (49%), Gaps = 10/375 (2%)
Query: 144 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 203
LI + + G+ AEK ++ M KG +PSV ++ L+ YGR + I + M+ +G
Sbjct: 430 LIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNG 489
Query: 204 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 263
P+ ++Y ++ + +K EA+ V D E + P ++++M+I G E
Sbjct: 490 TMPNVVSYGTLINCLCKGSKLLEAQIVKR---DMEDRGVSPKVRIYNMLIDGCCSKGKIE 546
Query: 264 KARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLI 320
A + M ++G++ + VTYN+L +S E + ++ R GL+PDV +Y LI
Sbjct: 547 DAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLI 606
Query: 321 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 380
+ YG A + +A++EEM +G++PT K Y++L+ G ++ +F M
Sbjct: 607 SGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEG-IELTERLFGEMS---LK 662
Query: 381 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 440
PD+ Y +L Y DME A +++ + + TY +LI G KV L ++ +
Sbjct: 663 PDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSL 722
Query: 441 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKT 500
D+M ++P + I+ + + KD+ SA VWY+EM+ GF D N L+S K
Sbjct: 723 IDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKE 782
Query: 501 ADERNEANELLGNFN 515
EA ++ N
Sbjct: 783 EWRSKEAEIVISEMN 797
Score = 135 bits (339), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 92/367 (25%), Positives = 168/367 (45%), Gaps = 14/367 (3%)
Query: 139 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 198
+ F L+ K G AE VL M G+ P + + L + Y + + A ++
Sbjct: 285 ITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYET 344
Query: 199 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 258
SG + +A T I+L + K ++AEE+ L E L P++ +++ MI Y +
Sbjct: 345 AVDSGVKMNAYTCSILLNALCKEGKIEKAEEI---LGREMAKGLVPNEVIYNTMIDGYCR 401
Query: 259 AGGYEKARKLFALMAERGVQQSTVTYNSLM-------SFETNYKEVSKIYDQMQRAGLQP 311
G AR M ++G++ + YN L+ E KEV+K M+ G+ P
Sbjct: 402 KGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNK----MKLKGVSP 457
Query: 312 DVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVF 371
V +Y +LI YG+ ++ + +EM D G P +Y L++ + +A+ V
Sbjct: 458 SVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVK 517
Query: 372 KCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKV 431
+ M SP + Y ++ + +E A +F + + + G N++TY TLI G +
Sbjct: 518 RDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMT 577
Query: 432 NNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAK 491
L + ++ ++ G+KP+ + +++ YG + + Y+EM+ G P K
Sbjct: 578 GKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTY 637
Query: 492 NILLSLA 498
++L+SL
Sbjct: 638 HLLISLC 644
Score = 126 bits (316), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 116/470 (24%), Positives = 204/470 (43%), Gaps = 26/470 (5%)
Query: 76 LMNQIEEVGSAVAVLRSERTRGQPLPKD---LVLGTLVRLKQLK-KWNVVSEVLEWLRIQ 131
L+N+ + + A + + R G D L+L LV+ KQ + NV +LE
Sbjct: 118 LLNESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILES---- 173
Query: 132 SWWDFNEMDFLM--LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRY 189
DF F+ I A K D K ++ + M PSV + L++ +G R
Sbjct: 174 ---DFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRM 230
Query: 190 KNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMF 249
+AE +F M + PS +TY ++ + +A E+ F + ++P F
Sbjct: 231 NDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGN---PEKSFKVRERMKADHIEPSLITF 287
Query: 250 HMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM-SFETNYKEVSK--IYDQMQR 306
+ ++ KAG E A + M + G T++ L + +N K + +Y+
Sbjct: 288 NTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVD 347
Query: 307 AGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQ 366
+G++ + + ++L+NA K + E+A + + G+ P YN ++D + G +
Sbjct: 348 SGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVG 407
Query: 367 ARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIK 426
AR + M + PD +Y ++ + +ME AEK ++K G P+V TY LI
Sbjct: 408 ARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIG 467
Query: 427 GYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPP 486
GY + +K +I +M NG PN + T+++ K A + ++ME G P
Sbjct: 468 GYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSP 527
Query: 487 DQKAKNILL----SLAKTADERNEANELLGN---FNHPNNEPGINGLSIS 529
+ N+L+ S K D + E+L N I+GLS++
Sbjct: 528 KVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMT 577
Score = 115 bits (289), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 89/384 (23%), Positives = 166/384 (43%), Gaps = 6/384 (1%)
Query: 143 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 202
+LI K N AE++ M + PS++++ L++ Y + G + + + RM++
Sbjct: 219 VLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKAD 278
Query: 203 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 262
PS +T+ +LK +A ++AE V + D PD F ++ Y
Sbjct: 279 HIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKD---LGFVPDAFTFSILFDGYSSNEKA 335
Query: 263 EKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQR---AGLQPDVVSYALL 319
E A ++ + GV+ + T + L++ ++ K + + R GL P+ V Y +
Sbjct: 336 EAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTM 395
Query: 320 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 379
I+ Y + A E M G++P H AYN L+ F G ++ A M+
Sbjct: 396 IDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGV 455
Query: 380 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 439
SP + +Y ++ Y + + + ++ +G +PNV++YGTLI K + L +
Sbjct: 456 SPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQI 515
Query: 440 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAK 499
+ M G+ P I+ ++D + A + KEM G + N L+
Sbjct: 516 VKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLS 575
Query: 500 TADERNEANELLGNFNHPNNEPGI 523
+ +EA +LL + +P +
Sbjct: 576 MTGKLSEAEDLLLEISRKGLKPDV 599
Score = 88.2 bits (217), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/317 (21%), Positives = 135/317 (42%), Gaps = 19/317 (5%)
Query: 215 LKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFH----------------MMIYMYKK 258
L++ ++ N+ + A V +LL + +P +++F ++ + +
Sbjct: 62 LRVLLQQNRIETARGVLSSLLRSDSTPFASPKELFSAFSLSSPSLKHDFSYLLLSVLLNE 121
Query: 259 AGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVS 315
+ +A LF + G+ S+ + L+ K+ ++ + + +P
Sbjct: 122 SKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFM 181
Query: 316 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 375
Y I A K + L +F M + P+ YN+L+D ++ A +F M
Sbjct: 182 YGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEML 241
Query: 376 RDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLE 435
R P + +Y T++ Y A + E + K R+K D P++IT+ TL+KG K +E
Sbjct: 242 ARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVE 301
Query: 436 KMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 495
+ +M+ G P+ F+ + D Y N+ ++A+ Y+ G + +ILL
Sbjct: 302 DAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILL 361
Query: 496 SLAKTADERNEANELLG 512
+ + +A E+LG
Sbjct: 362 NALCKEGKIEKAEEILG 378
>sp|Q9SH26|PP102_ARATH Pentatricopeptide repeat-containing protein At1g63400
OS=Arabidopsis thaliana GN=At1g63400 PE=2 SV=1
Length = 577
Score = 161 bits (407), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 104/437 (23%), Positives = 208/437 (47%), Gaps = 37/437 (8%)
Query: 95 TRGQPLPKDLVLGTLVR-LKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGD 153
+ +PLP L+ + ++KK+++V + E ++ + N + +LI + ++
Sbjct: 77 VKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQ-RLGISHNLYTYNILINCFCRRSQ 135
Query: 154 FNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQI 213
+ A +L M K GY PS+V+ ++L+ Y G R +A A+ +M G RP +T+
Sbjct: 136 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 195
Query: 214 ILKLFVEANKFKEAEEV--------------------------------FMTLLDEEKSP 241
++ NK EA + F L E +
Sbjct: 196 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 255
Query: 242 LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYK---EVS 298
++ + ++ +I K + A LF M +GV+ + +TY+SL+S NY+ + S
Sbjct: 256 IEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDAS 315
Query: 299 KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAF 358
++ M + P+VV++ LI+A+ K + EA +++EM+ + P Y+ L++ F
Sbjct: 316 RLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 375
Query: 359 AISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNV 418
+ +D+A+ +F+ M C P++ +Y T+++ + A ++ + FR + Q G V N
Sbjct: 376 CMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNT 435
Query: 419 ITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKE 478
+TY TLI G+ + + + ++ +M +G+ PN + T++D KN + A+V ++
Sbjct: 436 VTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEY 495
Query: 479 MESCGFPPDQKAKNILL 495
++ P NI++
Sbjct: 496 LQRSKMEPTIYTYNIMI 512
Score = 137 bits (346), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 86/362 (23%), Positives = 171/362 (47%), Gaps = 6/362 (1%)
Query: 130 IQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRY 189
+Q N + + +++ K+GD + A +L+ M +VV ++ ++++ +
Sbjct: 217 VQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHE 276
Query: 190 KNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMF 249
+A +F M++ G RP+ +TY ++ ++ +A + +++ + + P+ F
Sbjct: 277 DDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERK---INPNVVTF 333
Query: 250 HMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQR 306
+ +I + K G +A KL+ M +R + TY+SL+ E +++ M
Sbjct: 334 NALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMIS 393
Query: 307 AGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQ 366
P+VV+Y LIN + KA+R +E + +F EM G+ Y L+ F + D
Sbjct: 394 KDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDN 453
Query: 367 ARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIK 426
A+ VFK M D P+I +Y T+L +E A F L++ P + TY +I+
Sbjct: 454 AQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIE 513
Query: 427 GYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPP 486
G K +E +++ + + G+KP+ I+ T++ + + + A +++M G P
Sbjct: 514 GMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLP 573
Query: 487 DQ 488
D
Sbjct: 574 DS 575
Score = 97.4 bits (241), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/325 (22%), Positives = 139/325 (42%), Gaps = 8/325 (2%)
Query: 191 NAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE-EKSPLKPDQKMF 249
+A +F M S P PS + +L + KF ++ ++L ++ ++ + + +
Sbjct: 68 DAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKF----DLVISLGEKMQRLGISHNLYTY 123
Query: 250 HMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQR 306
+++I + + A L M + G + S VT +SL++ + K +S + DQM
Sbjct: 124 NILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVE 183
Query: 307 AGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQ 366
G +PD +++ LI+ + EA+A+ + M+ G +P Y ++++ G +D
Sbjct: 184 MGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDL 243
Query: 367 ARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIK 426
A + M + ++ Y+T++ + + A F ++ G PNVITY +LI
Sbjct: 244 AFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLIS 303
Query: 427 GYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPP 486
+ M I PN F ++DA+ K A Y EM P
Sbjct: 304 CLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDP 363
Query: 487 DQKAKNILLSLAKTADERNEANELL 511
D + L++ D +EA +
Sbjct: 364 DIFTYSSLINGFCMHDRLDEAKHMF 388
Score = 96.7 bits (239), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 125/270 (46%), Gaps = 3/270 (1%)
Query: 265 ARKLFALMAERGVQQSTVTYNSLMSFETNYKE---VSKIYDQMQRAGLQPDVVSYALLIN 321
A LF M + S +N L+S K+ V + ++MQR G+ ++ +Y +LIN
Sbjct: 69 AIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILIN 128
Query: 322 AYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSP 381
+ + + ALA+ +M+ G P+ + LL+ + + A + M P
Sbjct: 129 CFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRP 188
Query: 382 DICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIY 441
D ++TT++ + A R+ Q G PN++TYG ++ G K +++ +
Sbjct: 189 DTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLL 248
Query: 442 DKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTA 501
+KM I+ N I++T++D+ K + D A+ + EME+ G P+ + L+S
Sbjct: 249 NKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNY 308
Query: 502 DERNEANELLGNFNHPNNEPGINGLSISVD 531
+ ++A+ LL + P + + +D
Sbjct: 309 ERWSDASRLLSDMIERKINPNVVTFNALID 338
Score = 95.5 bits (236), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/389 (21%), Positives = 171/389 (43%), Gaps = 54/389 (13%)
Query: 130 IQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRY 189
+ S ++FN+ L++A K F+ + M + G + ++ ++ L+ + R +
Sbjct: 82 LPSIFEFNK-----LLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQI 136
Query: 190 KNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEE-KSPLKPDQKM 248
A A+ +M G PS +T +L + + +A + L+D+ + +PD
Sbjct: 137 SLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDA----VALVDQMVEMGYRPDTIT 192
Query: 249 FHMMI---YMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYD 302
F +I +++ KA +A L M +RG Q + VTY +++ ++ + +
Sbjct: 193 FTTLIHGLFLHNKA---SEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLN 249
Query: 303 QMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISG 362
+M+ A ++ +VV Y+ +I++ K R E++AL +F EM + GVR
Sbjct: 250 KMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVR----------------- 292
Query: 363 MVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYG 422
P++ +Y++++S N A + + + PNV+T+
Sbjct: 293 ------------------PNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFN 334
Query: 423 TLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESC 482
LI + K L + ++YD+M I P+ ++++++ + + D A ++ M S
Sbjct: 335 ALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK 394
Query: 483 GFPPDQKAKNILLSLAKTADERNEANELL 511
P+ N L++ A +E EL
Sbjct: 395 DCFPNVVTYNTLINGFCKAKRIDEGVELF 423
Score = 82.8 bits (203), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 51/255 (20%), Positives = 119/255 (46%), Gaps = 6/255 (2%)
Query: 211 YQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFA 270
Y+ IL+ + + K +A +F ++ + PL P F+ ++ K ++ L
Sbjct: 53 YREILRNGLHSMKLDDAIGLFGGMV--KSRPL-PSIFEFNKLLSAIAKMKKFDLVISLGE 109
Query: 271 LMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYALLINAYGKAR 327
M G+ + TYN L++ ++S + +M + G +P +V+ + L+N Y +
Sbjct: 110 KMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGK 169
Query: 328 REEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYT 387
R +A+A+ ++M++ G RP + L+ + +A + M + C P++ +Y
Sbjct: 170 RISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYG 229
Query: 388 TMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVN 447
+++ D++ A +++ NV+ Y T+I K + + + ++ +M
Sbjct: 230 VVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENK 289
Query: 448 GIKPNQTIFTTIMDA 462
G++PN +++++
Sbjct: 290 GVRPNVITYSSLISC 304
Score = 43.1 bits (100), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 54/107 (50%), Gaps = 6/107 (5%)
Query: 105 VLGTLVRLKQLKKWNVVSEVLEWLRIQ-SWWDFNEMDFLMLITAYGKQGDFNKAEKVLSF 163
+L L + +L+K VV E L+ +++ + + +N ++I K G +
Sbjct: 476 LLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYN-----IMIEGMCKAGKVEDGWDLFCS 530
Query: 164 MNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALT 210
++ KG P V+ + ++ + R G + A+A+FR+M+ GP P + T
Sbjct: 531 LSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
>sp|Q76C99|RF1_ORYSI Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1
PE=2 SV=1
Length = 791
Score = 160 bits (405), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 111/433 (25%), Positives = 196/433 (45%), Gaps = 54/433 (12%)
Query: 110 VRLKQLKKWNVVSEVLEWLRIQS-----WWDFNEMDFLMLITAYGKQGD----------- 153
+ LK L N E LE L + + + + + +I + K+GD
Sbjct: 163 ILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEM 222
Query: 154 ------------------------FNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRY 189
+KA +VL+ M K G P +++ +++ Y G+
Sbjct: 223 LDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQP 282
Query: 190 KNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMF 249
K A ++M+S G P +TY +++ + + EA ++F ++ K LKP+ +
Sbjct: 283 KEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSM---TKRGLKPEITTY 339
Query: 250 HMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQR 306
++ Y G + L LM G+ ++ L+ +V + ++ +M++
Sbjct: 340 GTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQ 399
Query: 307 AGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQ 366
GL P+ V+Y +I K+ R E+A+ FE+M+D G+ P + YN L+ ++
Sbjct: 400 QGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWER 459
Query: 367 ARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEG----AEKFFRRLKQDGFVPNVITYG 422
A + M DR IC T ++ +++ EG +EK F + + G PNVITY
Sbjct: 460 AEELILEM-LDR---GICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYN 515
Query: 423 TLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESC 482
TLI GY +++ M++ M G+KPN ++T+++ Y K + A+V +KEMES
Sbjct: 516 TLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESS 575
Query: 483 GFPPDQKAKNILL 495
G PD NI+L
Sbjct: 576 GVSPDIITYNIIL 588
Score = 150 bits (378), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 92/390 (23%), Positives = 175/390 (44%), Gaps = 41/390 (10%)
Query: 144 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 203
+I A K +KA +VL+ M K G P +++ +++ Y G+ K A ++M+S G
Sbjct: 237 IIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDG 296
Query: 204 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 263
P +TY +++ + + EA ++F ++ K LKP+ + ++ Y G
Sbjct: 297 VEPDVVTYSLLMDYLCKNGRCMEARKIFDSM---TKRGLKPEITTYGTLLQGYATKGALV 353
Query: 264 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLI 320
+ L LM G+ ++ L+ +V + ++ +M++ GL P+ V+Y +I
Sbjct: 354 EMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVI 413
Query: 321 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILL------------------------- 355
K+ R E+A+ FE+M+D G+ P + YN L+
Sbjct: 414 GILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGIC 473
Query: 356 ----------DAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKF 405
D+ G V ++ +F+ M R P++ +Y T+++ Y A M+ A K
Sbjct: 474 LNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKL 533
Query: 406 FRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGK 465
+ G PN +TY TLI GY K++ +E + ++ +M +G+ P+ + I+ +
Sbjct: 534 LSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQ 593
Query: 466 NKDFDSAVVWYKEMESCGFPPDQKAKNILL 495
+ +A Y + G + NI+L
Sbjct: 594 TRRTAAAKELYVRITESGTQIELSTYNIIL 623
Score = 149 bits (377), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 99/378 (26%), Positives = 176/378 (46%), Gaps = 12/378 (3%)
Query: 153 DFNKAEKVLSFMN------KKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRP 206
D N++++ L ++ G P VVS+T ++ + + G A + + M G P
Sbjct: 170 DENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILP 229
Query: 207 SALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKAR 266
+TY I+ +A +A EV T++ K+ + PD ++ +++ Y +G ++A
Sbjct: 230 DVVTYNSIIAALCKAQAMDKAMEVLNTMV---KNGVMPDCMTYNSILHGYCSSGQPKEAI 286
Query: 267 KLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLINAY 323
M GV+ VTY+ LM + E KI+D M + GL+P++ +Y L+ Y
Sbjct: 287 GFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGY 346
Query: 324 GKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDI 383
E + + M+ G+ P H ++IL+ A+A G VDQA VF MR+ +P+
Sbjct: 347 ATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNA 406
Query: 384 CSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDK 443
+Y ++ + +E A +F ++ +G P I Y +LI G N E+ E+ +
Sbjct: 407 VTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILE 466
Query: 444 MRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADE 503
M GI N F +I+D++ K + ++ M G P+ N L++ A +
Sbjct: 467 MLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGK 526
Query: 504 RNEANELLGNFNHPNNEP 521
+EA +LL +P
Sbjct: 527 MDEAMKLLSGMVSVGLKP 544
Score = 140 bits (353), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 93/346 (26%), Positives = 153/346 (44%), Gaps = 33/346 (9%)
Query: 143 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNA-EAIFRRMQS 201
+LI + G + L + KKG+ ++ T L++ R +A + + RRM
Sbjct: 92 ILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTE 151
Query: 202 SGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGG 261
G P+ +Y I+LK + N+ +EA E+ + D+ PD + +I + K G
Sbjct: 152 LGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGD 211
Query: 262 YEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLIN 321
+KA + M +RG+ PDVV+Y +I
Sbjct: 212 SDKAYSTYHEMLDRGIL--------------------------------PDVVTYNSIIA 239
Query: 322 AYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSP 381
A KA+ ++A+ V M+ GV P YN +L + SG +A K MR D P
Sbjct: 240 ALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEP 299
Query: 382 DICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIY 441
D+ +Y+ ++ A K F + + G P + TYGTL++GYA L +M +
Sbjct: 300 DVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLL 359
Query: 442 DKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 487
D M NGI P+ +F+ ++ AY K D A++ + +M G P+
Sbjct: 360 DLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPN 405
Score = 140 bits (352), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 83/347 (23%), Positives = 166/347 (47%), Gaps = 6/347 (1%)
Query: 144 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 203
L+ Y +G + +L M + G P + L+ AY + G+ A +F +M+ G
Sbjct: 342 LLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQG 401
Query: 204 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 263
P+A+TY ++ + ++ + ++A F ++DE L P +++ +I+ +E
Sbjct: 402 LNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDE---GLSPGNIVYNSLIHGLCTCNKWE 458
Query: 264 KARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLI 320
+A +L M +RG+ +T+ +NS++ E E K+++ M R G++P+V++Y LI
Sbjct: 459 RAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLI 518
Query: 321 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 380
N Y A + +EA+ + M+ G++P Y+ L++ + ++ A +FK M S
Sbjct: 519 NGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVS 578
Query: 381 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 440
PDI +Y +L A++ + R+ + G + TY ++ G K + +++
Sbjct: 579 PDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQM 638
Query: 441 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 487
+ + + +K F ++DA K D A + S G P+
Sbjct: 639 FQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPN 685
Score = 129 bits (325), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 102/398 (25%), Positives = 177/398 (44%), Gaps = 41/398 (10%)
Query: 101 PKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKV 160
P+ GTL++ K V L L +++ + F +LI AY KQG ++A V
Sbjct: 334 PEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLV 393
Query: 161 LSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVE 220
S M ++G P+ V++ A++ + GR ++A F +M G P + Y ++
Sbjct: 394 FSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCT 453
Query: 221 ANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQS 280
NK++ AEE+ + +LD + + F+ +I + K G ++ KLF LM GV+ +
Sbjct: 454 CNKWERAEELILEMLDR---GICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPN 510
Query: 281 TVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFE 337
+TYN+L+ E K+ M GL+P+ V+Y+ LIN Y K R E+AL +F+
Sbjct: 511 VITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFK 570
Query: 338 EMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK---------------------C--- 373
EM +GV P YNI+L + A+ ++ C
Sbjct: 571 EMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNK 630
Query: 374 -------MRRDRCSPDIC----SYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYG 422
M ++ C D+ ++ M+ A + + A+ F +G VPN TY
Sbjct: 631 LTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYR 690
Query: 423 TLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIM 460
+ + LE++ +++ M NG + + I+
Sbjct: 691 LMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIV 728
Score = 89.0 bits (219), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 116/278 (41%), Gaps = 46/278 (16%)
Query: 263 EKARKLFALMAERGVQQSTVTYNSLMS---FETNYKEVSKIYDQMQRAG---LQPDVVSY 316
E AR +F + RG S N ++ ++ VS+ Y++M RAG + PD+ +Y
Sbjct: 32 EDARHVFDELLRRGRGASIYGLNRALADVARDSPAAAVSR-YNRMARAGADEVTPDLCTY 90
Query: 317 ALLINAYGKARREEEALA------------------------------------VFEEML 340
+LI +A R + A V M
Sbjct: 91 GILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMT 150
Query: 341 DAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR---CSPDICSYTTMLSAYVNAS 397
+ G P +YNILL +A + M DR PD+ SYTT+++ +
Sbjct: 151 ELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEG 210
Query: 398 DMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFT 457
D + A + + G +P+V+TY ++I K ++K ME+ + M NG+ P+ +
Sbjct: 211 DSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYN 270
Query: 458 TIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 495
+I+ Y + A+ + K+M S G PD ++L+
Sbjct: 271 SILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLM 308
>sp|Q9SXD8|PPR90_ARATH Pentatricopeptide repeat-containing protein At1g62590
OS=Arabidopsis thaliana GN=At1g62590 PE=2 SV=1
Length = 634
Score = 160 bits (405), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 103/410 (25%), Positives = 203/410 (49%), Gaps = 18/410 (4%)
Query: 95 TRGQPLPKDLVLGTLVR-LKQLKKWNVVSEVLEWLR----IQSWWDFNEMDFLMLITAYG 149
+ +PLP + L+ + ++KK++VV + E ++ + + +N +LI +
Sbjct: 77 VKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYN-----ILINCFC 131
Query: 150 KQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSAL 209
++ + A +L M K GY PS+V+ ++L+ Y G R +A A+ +M G RP +
Sbjct: 132 RRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTI 191
Query: 210 TYQIILKLFVEANKFKEAEEVFMTLLDEE-KSPLKPDQKMFHMMIYMYKKAGGYEKARKL 268
T+ ++ NK EA + L+D + +P+ + +++ K G + A L
Sbjct: 192 TFTTLIHGLFLHNKASEA----VALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNL 247
Query: 269 FALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYALLINAYGK 325
M ++ V +N+++ Y+ V ++ +M+ G++P+VV+Y+ LI+
Sbjct: 248 LNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCS 307
Query: 326 ARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICS 385
R +A + +M++ + P +N L+DAF G +A ++ M + PDI +
Sbjct: 308 YGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFT 367
Query: 386 YTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMR 445
Y ++++ + ++ A++ F + P+V+TY TLIKG+ K +E E++ +M
Sbjct: 368 YNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMS 427
Query: 446 VNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 495
G+ + +TT++ + D D+A +K+M S G PPD +ILL
Sbjct: 428 HRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILL 477
Score = 149 bits (376), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 96/350 (27%), Positives = 169/350 (48%), Gaps = 6/350 (1%)
Query: 141 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 200
F +I + K + A + M KG P+VV++++L+ GR+ +A + M
Sbjct: 263 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 322
Query: 201 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 260
P+ +T+ ++ FV+ KF EAE+++ ++ K + PD ++ ++ +
Sbjct: 323 EKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMI---KRSIDPDIFTYNSLVNGFCMHD 379
Query: 261 GYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEV---SKIYDQMQRAGLQPDVVSYA 317
+KA+++F M + VTYN+L+ K V ++++ +M GL D V+Y
Sbjct: 380 RLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYT 439
Query: 318 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 377
LI + A VF++M+ GV P Y+ILLD +G +++A VF M++
Sbjct: 440 TLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKS 499
Query: 378 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 437
DI YTTM+ A ++ F L G PNV+TY T+I G L++
Sbjct: 500 EIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEA 559
Query: 438 MEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 487
+ KM+ +G PN + T++ A+ ++ D ++ +EM SC F D
Sbjct: 560 YALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGD 609
Score = 101 bits (252), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/328 (22%), Positives = 143/328 (43%), Gaps = 8/328 (2%)
Query: 188 RYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE-EKSPLKPDQ 246
+ +A +F M S P PS + + +L + KF +V ++L ++ ++ +
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKF----DVVISLGEKMQRLEIVHGL 120
Query: 247 KMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQ 303
++++I + + A L M + G + S VT +SL++ + K +S + DQ
Sbjct: 121 YTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQ 180
Query: 304 MQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGM 363
M G +PD +++ LI+ + EA+A+ + M+ G +P Y ++++ G
Sbjct: 181 MVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGD 240
Query: 364 VDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGT 423
D A + M + D+ + T++ + ++ A F+ ++ G PNV+TY +
Sbjct: 241 TDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSS 300
Query: 424 LIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCG 483
LI ++ M I PN F ++DA+ K F A Y +M
Sbjct: 301 LISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRS 360
Query: 484 FPPDQKAKNILLSLAKTADERNEANELL 511
PD N L++ D ++A ++
Sbjct: 361 IDPDIFTYNSLVNGFCMHDRLDKAKQMF 388
Score = 97.8 bits (242), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 126/272 (46%), Gaps = 3/272 (1%)
Query: 263 EKARKLFALMAERGVQQSTVTYNSLMSFETNYKE---VSKIYDQMQRAGLQPDVVSYALL 319
+ A LF M + S V +N L+S K+ V + ++MQR + + +Y +L
Sbjct: 67 DDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNIL 126
Query: 320 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 379
IN + + + ALA+ +M+ G P+ + LL+ + + A + M
Sbjct: 127 INCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGY 186
Query: 380 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 439
PD ++TT++ + A R+ Q G PN++TYG ++ G K + + +
Sbjct: 187 RPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALN 246
Query: 440 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAK 499
+ +KM I+ + IF TI+D+ K + D A+ +KEME+ G P+ + L+S
Sbjct: 247 LLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLC 306
Query: 500 TADERNEANELLGNFNHPNNEPGINGLSISVD 531
+ ++A++LL + P + + +D
Sbjct: 307 SYGRWSDASQLLSDMIEKKINPNLVTFNALID 338
>sp|Q9CAN0|PPR99_ARATH Pentatricopeptide repeat-containing protein At1g63130,
mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2
SV=1
Length = 630
Score = 160 bits (404), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 100/411 (24%), Positives = 204/411 (49%), Gaps = 10/411 (2%)
Query: 90 LRSERTRGQPLPKDLVLGTLVR-LKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAY 148
L + + +P P + L+ + ++ K+++V + E ++ N + +LI +
Sbjct: 68 LFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQ-NLGISHNLYTYSILINCF 126
Query: 149 GKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSA 208
++ + A VL+ M K GY P +V+ +L+ + G R +A ++ +M G +P +
Sbjct: 127 CRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDS 186
Query: 209 LTYQIILKLFVEANKFKEAEEVFMTLLDEEK-SPLKPDQKMFHMMIYMYKKAGGYEKARK 267
T+ ++ N+ EA + L+D +PD + +++ K G + A
Sbjct: 187 FTFNTLIHGLFRHNRASEA----VALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALS 242
Query: 268 LFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYALLINAYG 324
L M + ++ V YN+++ NYK V+ ++ +M G++P+VV+Y LI
Sbjct: 243 LLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLC 302
Query: 325 KARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDIC 384
R +A + +M++ + P ++ L+DAF G + +A ++ M + PDI
Sbjct: 303 NYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 362
Query: 385 SYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKM 444
+Y+++++ + ++ A+ F + PNV+TY TLIKG+ K +++ ME++ +M
Sbjct: 363 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREM 422
Query: 445 RVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 495
G+ N +TT++ + + ++ D+A + +K+M S G PD +ILL
Sbjct: 423 SQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILL 473
Score = 156 bits (395), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 95/357 (26%), Positives = 179/357 (50%), Gaps = 6/357 (1%)
Query: 144 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 203
+I A + N A + + M+ KG P+VV++ +L+ GR+ +A + M
Sbjct: 262 IIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERK 321
Query: 204 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 263
P+ +T+ ++ FV+ K EAE+++ ++ K + PD + +I + +
Sbjct: 322 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMI---KRSIDPDIFTYSSLINGFCMHDRLD 378
Query: 264 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLI 320
+A+ +F LM + + VTYN+L+ K V + ++ +M + GL + V+Y LI
Sbjct: 379 EAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLI 438
Query: 321 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 380
+ + +AR + A VF++M+ GV P Y+ILLD +G V+ A VF+ ++R +
Sbjct: 439 HGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKME 498
Query: 381 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 440
PDI +Y M+ A +E F L G PNV+TY T++ G+ + E+ +
Sbjct: 499 PDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADAL 558
Query: 441 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSL 497
+ +M+ G P+ + T++ A+ ++ D ++ +EM SC F D ++ ++
Sbjct: 559 FREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVTNM 615
Score = 150 bits (378), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 91/356 (25%), Positives = 168/356 (47%), Gaps = 6/356 (1%)
Query: 143 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 202
+++ K+GD + A +L M + P VV + +++A +A +F M +
Sbjct: 226 IVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNK 285
Query: 203 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 262
G RP+ +TY +++ ++ +A + +++ + + P+ F +I + K G
Sbjct: 286 GIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERK---INPNVVTFSALIDAFVKEGKL 342
Query: 263 EKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALL 319
+A KL+ M +R + TY+SL+ E +++ M P+VV+Y L
Sbjct: 343 VEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTL 402
Query: 320 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 379
I + KA+R +E + +F EM G+ Y L+ F + D A+ VFK M D
Sbjct: 403 IKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGV 462
Query: 380 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 439
PDI +Y+ +L N +E A F L++ P++ TY +I+G K +E +
Sbjct: 463 LPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWD 522
Query: 440 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 495
++ + + G+KPN +TT+M + + + A ++EM+ G PD N L+
Sbjct: 523 LFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLI 578
Score = 110 bits (275), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 89/366 (24%), Positives = 148/366 (40%), Gaps = 25/366 (6%)
Query: 166 KKGYAPSVVSHTALMEAYGRGGRYK---------------NAEAIFRRMQSSGPRPSALT 210
K G AP SH + G RY +A +F M S P PS +
Sbjct: 24 KCGTAPPSFSHCSFWVRDFSGVRYDYRKISINRLNDLKLDDAVNLFGDMVKSRPFPSIVE 83
Query: 211 YQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMF--HMMIYMYKKAGGYEKARKL 268
+ +L + NKF + L E+ L ++ ++I + + A +
Sbjct: 84 FSKLLSAIAKMNKFD-----LVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAV 138
Query: 269 FALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYALLINAYGK 325
A M + G + VT NSL++ + +S + QM G QPD ++ LI+ +
Sbjct: 139 LAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFR 198
Query: 326 ARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICS 385
R EA+A+ + M+ G +P Y I+++ G +D A ++ K M + + P +
Sbjct: 199 HNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVI 258
Query: 386 YTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMR 445
Y T++ A N ++ A F + G PNV+TY +LI+ + M
Sbjct: 259 YNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMI 318
Query: 446 VNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERN 505
I PN F+ ++DA+ K A Y EM PD + L++ D +
Sbjct: 319 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 378
Query: 506 EANELL 511
EA +
Sbjct: 379 EAKHMF 384
Score = 93.6 bits (231), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 120/270 (44%), Gaps = 3/270 (1%)
Query: 265 ARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLIN 321
A LF M + S V ++ L+S + V + +QMQ G+ ++ +Y++LIN
Sbjct: 65 AVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILIN 124
Query: 322 AYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSP 381
+ + + ALAV +M+ G P N LL+ F + A ++ M P
Sbjct: 125 CFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQP 184
Query: 382 DICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIY 441
D ++ T++ + A R+ G P+++TYG ++ G K +++ + +
Sbjct: 185 DSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLL 244
Query: 442 DKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTA 501
KM I+P I+ TI+DA K+ + A+ + EM++ G P+ N L+
Sbjct: 245 KKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNY 304
Query: 502 DERNEANELLGNFNHPNNEPGINGLSISVD 531
++A+ LL + P + S +D
Sbjct: 305 GRWSDASRLLSDMIERKINPNVVTFSALID 334
Score = 81.6 bits (200), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 102/206 (49%), Gaps = 6/206 (2%)
Query: 137 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 196
N + + LI + K ++ ++ M+++G + V++T L+ + + NA+ +F
Sbjct: 395 NVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVF 454
Query: 197 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 256
++M S G P +TY I+L K + A VF L ++S ++PD +++MI
Sbjct: 455 KQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYL---QRSKMEPDIYTYNIMIEGM 511
Query: 257 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDV 313
KAG E LF ++ +GV+ + VTY ++MS +E ++ +M+ G PD
Sbjct: 512 CKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDS 571
Query: 314 VSYALLINAYGKARREEEALAVFEEM 339
+Y LI A+ + + + + EM
Sbjct: 572 GTYNTLIRAHLRDGDKAASAELIREM 597
>sp|O82178|PP186_ARATH Pentatricopeptide repeat-containing protein At2g35130
OS=Arabidopsis thaliana GN=At2g35130 PE=2 SV=1
Length = 591
Score = 159 bits (402), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 111/451 (24%), Positives = 210/451 (46%), Gaps = 45/451 (9%)
Query: 103 DLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLS 162
D ++ V+L+ KKW+ + V EW+ +S + + + F +LI AYG++ + +AE +
Sbjct: 120 DDLINVSVQLRLNKKWDSIILVCEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYV 179
Query: 163 FMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQI----ILKLF 218
+ + Y P+ ++ L++AY G + AE + MQ+ P + + I L
Sbjct: 180 QLLESRYVPTEDTYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLM 239
Query: 219 VEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQ 278
+EA +VF + ++ KP + +++MI +Y KA + KL+ M +
Sbjct: 240 KRKGNTEEAIDVFQRM---KRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCK 296
Query: 279 QSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAV 335
+ TY +L+ + E ++ +I++Q+Q GL+PDV Y L+ +Y +A A +
Sbjct: 297 PNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEI 356
Query: 336 FEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVN 395
F M G P +YNI++DA+ +G+ A VF+ M+R +P + S+ +LSAY
Sbjct: 357 FSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSK 416
Query: 396 ASDMEGAEKFFRRLKQDGFVP-----------------------------------NVIT 420
A D+ E + + ++G P ++ T
Sbjct: 417 ARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADIST 476
Query: 421 YGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEME 480
Y LI Y K LE++ E++ +++ +P+ +T+ + AY + K + + ++EM
Sbjct: 477 YNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMI 536
Query: 481 SCGFPPDQKAKNILLSLAKTADERNEANELL 511
G PD +LLS + ++ + +L
Sbjct: 537 DSGCAPDGGTAKVLLSACSSEEQVEQVTSVL 567
Score = 150 bits (378), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 95/368 (25%), Positives = 178/368 (48%), Gaps = 10/368 (2%)
Query: 163 FMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEAN 222
+ K + P V+ L++AYG+ +YK AE+++ ++ S P+ TY +++K + A
Sbjct: 145 ILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAG 204
Query: 223 KFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIY-MYKKAGGYEKARKLFALMAERGVQQST 281
+ AE V + + + SP +++ I + K+ G E+A +F M + +T
Sbjct: 205 LIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTT 264
Query: 282 VTYNSLMSFETNYKEVSK------IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAV 335
TYN +++ Y + SK +Y +M+ +P++ +Y L+NA+ + E+A +
Sbjct: 265 ETYNLMINL---YGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEI 321
Query: 336 FEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVN 395
FE++ + G+ P YN L+++++ +G A +F M+ C PD SY M+ AY
Sbjct: 322 FEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGR 381
Query: 396 ASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTI 455
A AE F +K+ G P + ++ L+ Y+K ++ K I +M NG++P+ +
Sbjct: 382 AGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFV 441
Query: 456 FTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFN 515
++++ YG+ F EME+ D NIL+++ A EL
Sbjct: 442 LNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELK 501
Query: 516 HPNNEPGI 523
N P +
Sbjct: 502 EKNFRPDV 509
Score = 109 bits (272), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 131/286 (45%), Gaps = 6/286 (2%)
Query: 137 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 196
N + L+ A+ ++G KAE++ + + G P V + ALME+Y R G A IF
Sbjct: 298 NICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIF 357
Query: 197 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 256
MQ G P +Y I++ + A +AE VF + ++ + P K +++ Y
Sbjct: 358 SLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEM---KRLGIAPTMKSHMLLLSAY 414
Query: 257 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFE---TNYKEVSKIYDQMQRAGLQPDV 313
KA K + M+E GV+ T NS+++ + ++ KI +M+ D+
Sbjct: 415 SKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADI 474
Query: 314 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 373
+Y +LIN YGKA E +F E+ + RP + + A++ + + VF+
Sbjct: 475 STYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEE 534
Query: 374 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVI 419
M C+PD + +LSA + +E R + + V +++
Sbjct: 535 MIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTMHKGVTVSSLV 580
Score = 103 bits (258), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 117/233 (50%), Gaps = 6/233 (2%)
Query: 304 MQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGM 363
++++ QPDV+ + LLI+AYG+ + +EA +++ ++L++ PT Y +L+ A+ ++G+
Sbjct: 146 LRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGL 205
Query: 364 VDQARTVFKCMRRDRCSPDICSYTTMLSAYVNA-----SDMEGAEKFFRRLKQDGFVPNV 418
+++A V M+ SP T+ +AY+ + E A F+R+K+D P
Sbjct: 206 IERAEVVLVEMQNHHVSPKTIG-VTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTT 264
Query: 419 ITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKE 478
TY +I Y K + ++Y +MR + KPN +T +++A+ + + A +++
Sbjct: 265 ETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQ 324
Query: 479 MESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 531
++ G PD N L+ A A E+ H EP +I VD
Sbjct: 325 LQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVD 377
Score = 103 bits (256), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 67/306 (21%), Positives = 139/306 (45%), Gaps = 6/306 (1%)
Query: 143 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 202
++I YGK + K+ M P++ ++TAL+ A+ R G + AE IF ++Q
Sbjct: 269 LMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQED 328
Query: 203 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 262
G P Y +++ + A A E+F + + +PD+ +++M+ Y +AG +
Sbjct: 329 GLEPDVYVYNALMESYSRAGYPYGAAEIFSLM---QHMGCEPDRASYNIMVDAYGRAGLH 385
Query: 263 EKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALL 319
A +F M G+ + ++ L+S + ++V+K I +M G++PD +
Sbjct: 386 SDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSM 445
Query: 320 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 379
+N YG+ + + + EM + YNIL++ + +G +++ +F ++
Sbjct: 446 LNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNF 505
Query: 380 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 439
PD+ ++T+ + AY + F + G P+ T L+ + +E++
Sbjct: 506 RPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTS 565
Query: 440 IYDKMR 445
+ M
Sbjct: 566 VLRTMH 571
>sp|Q9LQ14|PPR96_ARATH Pentatricopeptide repeat-containing protein At1g62930,
chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2
SV=2
Length = 629
Score = 156 bits (395), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 111/474 (23%), Positives = 219/474 (46%), Gaps = 45/474 (9%)
Query: 90 LRSERTRGQPLPKDLVLGTLVR-LKQLKKWNVV---SEVLEWLRIQ-SWWDFNEMDFLML 144
L E + +PLP + L+ + ++ K+++V E ++ LRI + +N +L
Sbjct: 67 LFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN-----IL 121
Query: 145 ITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGP 204
I + ++ A VL M K GY P +V+ ++L+ Y G R A A+ +M
Sbjct: 122 INCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEY 181
Query: 205 RPSALTYQIILKLFVEANKFKEAEEVF-------------------------------MT 233
+P+ +T+ ++ NK EA + ++
Sbjct: 182 QPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALS 241
Query: 234 LLDE-EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFET 292
LL + EK ++ D ++ +I A LF M +G++ + VTYNSL+
Sbjct: 242 LLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLC 301
Query: 293 NY---KEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHK 349
NY + S++ M + P+VV+++ LI+A+ K + EA +++EM+ + P
Sbjct: 302 NYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 361
Query: 350 AYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRL 409
Y+ L++ F + +D+A+ +F+ M C P++ +Y T++ + A +E + FR +
Sbjct: 362 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREM 421
Query: 410 KQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDF 469
Q G V N +TY TLI+G + + + +I+ KM +G+ P+ ++ ++D K
Sbjct: 422 SQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKL 481
Query: 470 DSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGI 523
+ A+V ++ ++ PD NI++ A + + +L + + +P +
Sbjct: 482 EKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNV 535
Score = 151 bits (381), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 95/360 (26%), Positives = 179/360 (49%), Gaps = 6/360 (1%)
Query: 141 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 200
+ +I A + N A + + M+ KG P+VV++ +L+ GR+ +A + M
Sbjct: 258 YTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMI 317
Query: 201 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 260
P+ +T+ ++ FV+ K EAE+++ ++ K + PD + +I +
Sbjct: 318 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI---KRSIDPDIFTYSSLINGFCMHD 374
Query: 261 GYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYA 317
++A+ +F LM + + VTYN+L+ K V + ++ +M + GL + V+Y
Sbjct: 375 RLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYN 434
Query: 318 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 377
LI +A + A +F++M+ GV P Y+ILLD G +++A VF+ +++
Sbjct: 435 TLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKS 494
Query: 378 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 437
+ PDI +Y M+ A +E F L G PNVI Y T+I G+ + E+
Sbjct: 495 KMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEA 554
Query: 438 MEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSL 497
++ +M+ +G PN + T++ A ++ D ++ KEM SCGF D ++++++
Sbjct: 555 DALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINM 614
Score = 149 bits (376), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 91/355 (25%), Positives = 168/355 (47%), Gaps = 6/355 (1%)
Query: 144 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 203
++ K+GD + A +L M K VV +T +++A +A +F M + G
Sbjct: 226 VVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKG 285
Query: 204 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 263
RP+ +TY +++ ++ +A + +++ + + P+ F +I + K G
Sbjct: 286 IRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERK---INPNVVTFSALIDAFVKEGKLV 342
Query: 264 KARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLI 320
+A KL+ M +R + TY+SL+ E +++ M P+VV+Y LI
Sbjct: 343 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLI 402
Query: 321 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 380
+ KA+R EE + +F EM G+ YN L+ +G D A+ +FK M D
Sbjct: 403 KGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVP 462
Query: 381 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 440
PDI +Y+ +L +E A F L++ P++ TY +I+G K +E ++
Sbjct: 463 PDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDL 522
Query: 441 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 495
+ + + G+KPN I+TT++ + + + A ++EM+ G P+ N L+
Sbjct: 523 FCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLI 577
Score = 132 bits (333), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 93/365 (25%), Positives = 175/365 (47%), Gaps = 43/365 (11%)
Query: 101 PKDLVLGTLVR-LKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEK 159
P + +L+R L +W+ S +L + I+ + N + F LI A+ K+G +AEK
Sbjct: 288 PNVVTYNSLIRCLCNYGRWSDASRLLSDM-IERKINPNVVTFSALIDAFVKEGKLVEAEK 346
Query: 160 VLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFV 219
+ M K+ P + ++++L+ + R A+ +F M S P+ +TY ++K F
Sbjct: 347 LYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFC 406
Query: 220 EANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQ 279
+A + +E E LF M++RG+
Sbjct: 407 KAKRVEEGME--------------------------------------LFREMSQRGLVG 428
Query: 280 STVTYNSLMS--FETNYKEVS-KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVF 336
+TVTYN+L+ F+ +++ KI+ +M G+ PD+++Y++L++ K + E+AL VF
Sbjct: 429 NTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVF 488
Query: 337 EEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNA 396
E + + + P YNI+++ +G V+ +F + P++ YTTM+S +
Sbjct: 489 EYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRK 548
Query: 397 SDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIF 456
E A+ FR +K+DG +PN TY TLI+ + + E+ +MR G + +
Sbjct: 549 GLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTI 608
Query: 457 TTIMD 461
+ +++
Sbjct: 609 SMVIN 613
Score = 101 bits (252), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 140/326 (42%), Gaps = 10/326 (3%)
Query: 191 NAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKP--DQKM 248
+A +F M S P PS + + +L + NKF + L E L+ D
Sbjct: 63 DAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFD-----LVISLGERMQNLRISYDLYS 117
Query: 249 FHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQ 305
++++I + + A + M + G + VT +SL++ + K +S+ + DQM
Sbjct: 118 YNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMF 177
Query: 306 RAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVD 365
QP+ V++ LI+ + EA+A+ + M+ G +P Y +++ G +D
Sbjct: 178 VMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDID 237
Query: 366 QARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLI 425
A ++ K M + + D+ YTT++ A N ++ A F + G PNV+TY +LI
Sbjct: 238 LALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 297
Query: 426 KGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFP 485
+ + M I PN F+ ++DA+ K A Y EM
Sbjct: 298 RCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 357
Query: 486 PDQKAKNILLSLAKTADERNEANELL 511
PD + L++ D +EA +
Sbjct: 358 PDIFTYSSLINGFCMHDRLDEAKHMF 383
Score = 74.7 bits (182), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/275 (21%), Positives = 118/275 (42%), Gaps = 13/275 (4%)
Query: 257 KKAGGYEKARKLFALMAERGVQQSTVTY--------NSLMSFETNYKEVSKIYDQMQRAG 308
K+ KA LF+L RGV S +Y N L+ + + + ++ +M ++
Sbjct: 21 KRFAQLRKASPLFSL---RGVYFSAASYDYREKLSRNVLLDLKLD--DAVDLFGEMVQSR 75
Query: 309 LQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQAR 368
P +V + L++A K + + +++ E M + + +YNIL++ F + A
Sbjct: 76 PLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLAL 135
Query: 369 TVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGY 428
V M + PDI + +++L+ Y + + A ++ + PN +T+ TLI G
Sbjct: 136 AVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGL 195
Query: 429 AKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQ 488
N + + + D+M G +P+ + T+++ K D D A+ K+ME D
Sbjct: 196 FLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADV 255
Query: 489 KAKNILLSLAKTADERNEANELLGNFNHPNNEPGI 523
++ N+A L ++ P +
Sbjct: 256 VIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNV 290
>sp|Q9FLD8|PP408_ARATH Pentatricopeptide repeat-containing protein At5g39980,
chloroplastic OS=Arabidopsis thaliana GN=At5g39980 PE=2
SV=1
Length = 678
Score = 156 bits (394), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 103/418 (24%), Positives = 198/418 (47%), Gaps = 44/418 (10%)
Query: 144 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 203
LI + D++KA + S + + G P +V++ +++ YG+ ++ A + + M +G
Sbjct: 231 LIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAG 290
Query: 204 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 263
P+ ++Y +L ++VE +KF EA VF + E L D ++MI +Y + +
Sbjct: 291 VLPNTVSYSTLLSVYVENHKFLEALSVFAEM-KEVNCAL--DLTTCNIMIDVYGQLDMVK 347
Query: 264 KARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLI 320
+A +LF + + ++ + V+YN+++ + E ++ MQR ++ +VV+Y +I
Sbjct: 348 EADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMI 407
Query: 321 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 380
YGK E+A + +EM G+ P Y+ ++ + +G +D+A T+F+ +R
Sbjct: 408 KIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVE 467
Query: 381 PDICSYTTMLSAY-------------------------------VNASDMEGAEKFFRRL 409
D Y TM+ AY A E A FR+
Sbjct: 468 IDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETAITILAKAGRTEEATWVFRQA 527
Query: 410 KQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDF 469
+ G V ++ +G +I Y++ ++E+++KMR G P+ + +++AYGK ++F
Sbjct: 528 FESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREF 587
Query: 470 DSAVVWYKEM--ESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGING 525
+ A Y+EM E C FP + + +LSL + + L F ++P +N
Sbjct: 588 EKADTVYREMQEEGCVFPDEVHFQ--MLSLYSSKKDFEMVESL---FQRLESDPNVNS 640
Score = 155 bits (392), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 99/407 (24%), Positives = 189/407 (46%), Gaps = 7/407 (1%)
Query: 126 EWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKG-YAPSVVSHTALMEAYG 184
E + S + ++ +++ ++ D+ ++ +L +++++ Y PSV ++ ++
Sbjct: 107 ELFSLLSTYKDRQLSIRFMVSLLSRENDWQRSLALLDWVHEEAKYTPSVFAYNVVLRNVL 166
Query: 185 RGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKP 244
R ++ A +F M+ P TY ++ F + F A L E+ +
Sbjct: 167 RAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSA---LSWLQKMEQDRVSG 223
Query: 245 DQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIY 301
D ++ +I + ++ Y KA +F+ + G+ V YNS+++ ++E +
Sbjct: 224 DLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLI 283
Query: 302 DQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAIS 361
+M AG+ P+ VSY+ L++ Y + + EAL+VF EM + NI++D +
Sbjct: 284 KEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQL 343
Query: 362 GMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITY 421
MV +A +F +R+ P++ SY T+L Y A A FR +++ NV+TY
Sbjct: 344 DMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTY 403
Query: 422 GTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMES 481
T+IK Y K EK + +M+ GI+PN ++TI+ +GK D A ++++ S
Sbjct: 404 NTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRS 463
Query: 482 CGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSI 528
G DQ ++ + A LL P+N P ++I
Sbjct: 464 SGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETAITI 510
Score = 114 bits (284), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 158/329 (48%), Gaps = 16/329 (4%)
Query: 133 WWDFNEMD-------FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGR 185
+W +MD + ++ YG+ F +A + M +K +VV++ +++ YG+
Sbjct: 353 FWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGK 412
Query: 186 GGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPD 245
++ A + + MQS G P+A+TY I+ ++ +A K A +F L S ++ D
Sbjct: 413 TMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKL---RSSGVEID 469
Query: 246 QKMFHMMIYMYKKAGGYEKARKLFA-LMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQM 304
Q ++ MI Y++ G A++L L + + T ++++ +E + ++ Q
Sbjct: 470 QVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETAI--TILAKAGRTEEATWVFRQA 527
Query: 305 QRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMV 364
+G D+ + +IN Y + +R + VFE+M AG P ++L+A+
Sbjct: 528 FESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREF 587
Query: 365 DQARTVFKCMRRDRCS-PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGT 423
++A TV++ M+ + C PD + MLS Y + D E E F+RL+ D V + +
Sbjct: 588 EKADTVYREMQEEGCVFPDEVHFQ-MLSLYSSKKDFEMVESLFQRLESDPNVNSKELHLV 646
Query: 424 LIKGYAKVNNLEKMMEIYDKMRVNGI-KP 451
+ Y + + L + ++MR GI KP
Sbjct: 647 VAALYERADKLNDASRVMNRMRERGILKP 675
Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 95/191 (49%)
Query: 341 DAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDME 400
+A P+ AYN++L + D A +F MR+ +PD +Y+T+++++ +
Sbjct: 148 EAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFD 207
Query: 401 GAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIM 460
A + ++++QD +++ Y LI+ ++ + K + I+ +++ +GI P+ + +++
Sbjct: 208 SALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMI 267
Query: 461 DAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNE 520
+ YGK K F A + KEM G P+ + + LLS+ + EA + N
Sbjct: 268 NVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCA 327
Query: 521 PGINGLSISVD 531
+ +I +D
Sbjct: 328 LDLTTCNIMID 338
Score = 46.2 bits (108), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 74/146 (50%), Gaps = 7/146 (4%)
Query: 102 KDL-VLGTLVRL-KQLKKWNVVSEVLEWLRIQSWW-DFNEMDFLMLITAYGKQGDFNKAE 158
KD+ V G ++ L + +++ V EV E +R ++ D N + M++ AYGKQ +F KA+
Sbjct: 534 KDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIA--MVLNAYGKQREFEKAD 591
Query: 159 KVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLF 218
V M ++G H ++ Y ++ E++F+R++S S + ++ L+
Sbjct: 592 TVYREMQEEGCVFPDEVHFQMLSLYSSKKDFEMVESLFQRLESDPNVNSKELHLVVAALY 651
Query: 219 VEANKFKEAEEVFMTLLDEEKSPLKP 244
A+K +A V + E+ LKP
Sbjct: 652 ERADKLNDASRVMNRM--RERGILKP 675
>sp|Q6NQ83|PP247_ARATH Pentatricopeptide repeat-containing protein At3g22470,
mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2
SV=1
Length = 619
Score = 155 bits (393), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 89/358 (24%), Positives = 179/358 (50%), Gaps = 6/358 (1%)
Query: 143 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 202
++I + K G F+ A + + M KG VV++++L+ G++ + + R M
Sbjct: 250 IVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGR 309
Query: 203 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 262
P +T+ ++ +FV+ K EA+E++ ++ + PD ++ +I + K
Sbjct: 310 NIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITR---GIAPDTITYNSLIDGFCKENCL 366
Query: 263 EKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYALL 319
+A ++F LM +G + VTY+ L++ K V +++ ++ GL P+ ++Y L
Sbjct: 367 HEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTL 426
Query: 320 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 379
+ + ++ + A +F+EM+ GV P+ Y ILLD +G +++A +F+ M++ R
Sbjct: 427 VLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRM 486
Query: 380 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 439
+ I Y ++ NAS ++ A F L G P+V+TY +I G K +L +
Sbjct: 487 TLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADM 546
Query: 440 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSL 497
++ KM+ +G P+ + ++ A+ S+V +EM+ CGF D +++ +
Sbjct: 547 LFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDM 604
Score = 151 bits (382), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 93/399 (23%), Positives = 190/399 (47%), Gaps = 9/399 (2%)
Query: 131 QSW---WDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGG 187
++W ++ + + F L+ + +G ++A ++ M + P +V+ + L+ G
Sbjct: 130 RAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKG 189
Query: 188 RYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQK 247
R A + RM G +P +TY +L ++ A ++F + E+ +K
Sbjct: 190 RVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKM---EERNIKASVV 246
Query: 248 MFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQM 304
+ ++I K G ++ A LF M +G++ VTY+SL+ N + + +K+ +M
Sbjct: 247 QYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREM 306
Query: 305 QRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMV 364
+ PDVV+++ LI+ + K + EA ++ EM+ G+ P YN L+D F +
Sbjct: 307 IGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCL 366
Query: 365 DQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTL 424
+A +F M C PDI +Y+ ++++Y A ++ + FR + G +PN ITY TL
Sbjct: 367 HEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTL 426
Query: 425 IKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGF 484
+ G+ + L E++ +M G+ P+ + ++D N + + A+ +++M+
Sbjct: 427 VLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRM 486
Query: 485 PPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGI 523
NI++ A + ++A L + + +P +
Sbjct: 487 TLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDV 525
Score = 132 bits (333), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 100/462 (21%), Positives = 206/462 (44%), Gaps = 11/462 (2%)
Query: 75 RLMNQIEEVGSAVAV-LRSERTRGQPLPKDLVLGTLVR-LKQLKKWNVVSEVLEWLRIQS 132
RL N I ++ A+ L + +PLP + L + + K++++V + + +
Sbjct: 41 RLRNGIVDIKVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNG 100
Query: 133 WWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNA 192
+ + ++I Y ++ A VL K GY P ++ + L+ + GR A
Sbjct: 101 I-EHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEA 159
Query: 193 EAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEE-KSPLKPDQKMFHM 251
A+ RM RP +T ++ + EA + L+D + +PD+ +
Sbjct: 160 VALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEA----LVLIDRMVEYGFQPDEVTYGP 215
Query: 252 MIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAG 308
++ K+G A LF M ER ++ S V Y+ + + + ++ + ++++M+ G
Sbjct: 216 VLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKG 275
Query: 309 LQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQAR 368
++ DVV+Y+ LI + ++ + EM+ + P ++ L+D F G + +A+
Sbjct: 276 IKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAK 335
Query: 369 TVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGY 428
++ M +PD +Y +++ + + + A + F + G P+++TY LI Y
Sbjct: 336 ELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSY 395
Query: 429 AKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQ 488
K ++ M ++ ++ G+ PN + T++ + ++ ++A ++EM S G PP
Sbjct: 396 CKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSV 455
Query: 489 KAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISV 530
ILL E N+A E+ GI +I +
Sbjct: 456 VTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIII 497
Score = 115 bits (287), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/410 (21%), Positives = 176/410 (42%), Gaps = 6/410 (1%)
Query: 130 IQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRY 189
IQS +DF L +A + ++ M G + + T ++ Y R +
Sbjct: 62 IQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKL 121
Query: 190 KNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMF 249
A ++ R G P +T+ ++ F + EA + +++ ++ +PD
Sbjct: 122 LFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQ---RPDLVTV 178
Query: 250 HMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQR 306
+I G +A L M E G Q VTY +++ N ++ +M+
Sbjct: 179 STLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEE 238
Query: 307 AGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQ 366
++ VV Y+++I++ K ++AL++F EM G++ Y+ L+ G D
Sbjct: 239 RNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDD 298
Query: 367 ARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIK 426
+ + M PD+ +++ ++ +V + A++ + + G P+ ITY +LI
Sbjct: 299 GAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLID 358
Query: 427 GYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPP 486
G+ K N L + +++D M G +P+ ++ ++++Y K K D + ++E+ S G P
Sbjct: 359 GFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIP 418
Query: 487 DQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVDEEDDD 536
+ N L+ + + N A EL P + I +D D+
Sbjct: 419 NTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDN 468
Score = 71.6 bits (174), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 89/200 (44%), Gaps = 6/200 (3%)
Query: 137 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 196
N + + L+ + + G N A+++ M +G PSVV++ L++ G A IF
Sbjct: 419 NTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIF 478
Query: 197 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 256
+MQ S Y II+ A+K +A +F +L D+ +KPD +++MI
Sbjct: 479 EKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDK---GVKPDVVTYNVMIGGL 535
Query: 257 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFE---TNYKEVSKIYDQMQRAGLQPDV 313
K G +A LF M E G TYN L+ + ++ ++M+ G D
Sbjct: 536 CKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADS 595
Query: 314 VSYALLINAYGKARREEEAL 333
+ ++I+ R ++ L
Sbjct: 596 STIKMVIDMLSDRRLDKSFL 615
Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 86/211 (40%)
Query: 331 EALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTML 390
+A+ +FE M+ + PT +N L A A + D K M + D+ + T M+
Sbjct: 53 DAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMI 112
Query: 391 SAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIK 450
+ Y + A R + G+ P+ IT+ TL+ G+ + + + + D+M +
Sbjct: 113 NCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQR 172
Query: 451 PNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANEL 510
P+ +T+++ A+V M GF PD+ +L+ + A +L
Sbjct: 173 PDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDL 232
Query: 511 LGNFNHPNNEPGINGLSISVDEEDDDDDDDE 541
N + + SI +D D D+
Sbjct: 233 FRKMEERNIKASVVQYSIVIDSLCKDGSFDD 263
>sp|Q8S9D1|PP395_ARATH Pentatricopeptide repeat-containing protein At5g21222
OS=Arabidopsis thaliana GN=ATC401 PE=2 SV=1
Length = 831
Score = 155 bits (392), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 102/357 (28%), Positives = 175/357 (49%), Gaps = 10/357 (2%)
Query: 173 VVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFM 232
V S T LM GR + A +IF + G +PS +TY ++ F +
Sbjct: 319 VRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHS----LL 374
Query: 233 TLLDE-EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFE 291
+L+ + EK+ LKPD +F+ +I ++G ++A K+F M E G + + T+N+L+
Sbjct: 375 SLISKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGY 434
Query: 292 ---TNYKEVSKIYDQMQR-AGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPT 347
+E S++ D M R LQP+ + +L+ A+ R+ EEA + +M GV+P
Sbjct: 435 GKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPD 494
Query: 348 HKAYNILLDAFAISGMVDQAR-TVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFF 406
+N L A+A G A + M ++ P++ + T+++ Y ME A +FF
Sbjct: 495 VVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFF 554
Query: 407 RRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKN 466
R+K+ G PN+ + +LIKG+ +N+++ + E+ D M G+KP+ F+T+M+A+
Sbjct: 555 YRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSV 614
Query: 467 KDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGI 523
D Y +M G PD A +IL A E +A ++L P +
Sbjct: 615 GDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNV 671
Score = 151 bits (381), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 97/388 (25%), Positives = 182/388 (46%), Gaps = 7/388 (1%)
Query: 139 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 198
+ + L+TA +Q F+ ++S + K G P + A++ A G A IF +
Sbjct: 355 ITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEK 414
Query: 199 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 258
M+ SG +P+A T+ ++K + + K +E+ + +L +E L+P+ + ++++ +
Sbjct: 415 MKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEM--LQPNDRTCNILVQAWCN 472
Query: 259 AGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK----IYDQMQRAGLQPDVV 314
E+A + M GV+ VT+N+L I +M ++P+V
Sbjct: 473 QRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVR 532
Query: 315 SYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCM 374
+ ++N Y + + EEAL F M + GV P +N L+ F +D V M
Sbjct: 533 TCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLM 592
Query: 375 RRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNL 434
PD+ +++T+++A+ + DM+ E+ + + + G P++ + L KGYA+
Sbjct: 593 EEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEP 652
Query: 435 EKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMES-CGFPPDQKAKNI 493
EK +I ++MR G++PN I+T I+ + + A+ YK+M G P+
Sbjct: 653 EKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYET 712
Query: 494 LLSLAKTADERNEANELLGNFNHPNNEP 521
L+ A + +A ELL + N P
Sbjct: 713 LIWGFGEAKQPWKAEELLKDMEGKNVVP 740
Score = 135 bits (339), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/331 (26%), Positives = 167/331 (50%), Gaps = 13/331 (3%)
Query: 141 FLMLITAYGKQGDFNKAEKVLSFMNK-KGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRM 199
F LI YGK G ++ ++L M + + P+ + L++A+ + + A I +M
Sbjct: 427 FNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKM 486
Query: 200 QSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKA 259
QS G +P +T+ + K + AE++ + + K +KP+ + ++ Y +
Sbjct: 487 QSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNK--VKPNVRTCGTIVNGYCEE 544
Query: 260 GGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKE---VSKIYDQMQRAGLQPDVVSY 316
G E+A + F M E GV + +NSL+ N + V ++ D M+ G++PDVV++
Sbjct: 545 GKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTF 604
Query: 317 ALLINAY---GKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 373
+ L+NA+ G +R EE ++ +ML+ G+ P A++IL +A +G ++A +
Sbjct: 605 STLMNAWSSVGDMKRCEE---IYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQ 661
Query: 374 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQD-GFVPNVITYGTLIKGYAKVN 432
MR+ P++ YT ++S + +A +M+ A + ++++ G PN+ TY TLI G+ +
Sbjct: 662 MRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAK 721
Query: 433 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAY 463
K E+ M + P + I D +
Sbjct: 722 QPWKAEELLKDMEGKNVVPTRKTMQLIADGW 752
Score = 78.2 bits (191), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 105/224 (46%), Gaps = 7/224 (3%)
Query: 144 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 203
++ Y ++G +A + M + G P++ +L++ + + M+ G
Sbjct: 537 IVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFG 596
Query: 204 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 263
+P +T+ ++ + K EE++ +L+ + PD F ++ Y +AG E
Sbjct: 597 VKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLE---GGIDPDIHAFSILAKGYARAGEPE 653
Query: 264 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQR-AGLQPDVVSYALL 319
KA ++ M + GV+ + V Y ++S + E+ K +Y +M GL P++ +Y L
Sbjct: 654 KAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETL 713
Query: 320 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGM 363
I +G+A++ +A + ++M V PT K ++ D + G+
Sbjct: 714 IWGFGEAKQPWKAEELLKDMEGKNVVPTRKTMQLIADGWKSIGV 757
Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 87/184 (47%), Gaps = 1/184 (0%)
Query: 312 DVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVF 371
DV S L+N + R +EA ++F +++ G +P+ Y L+ A ++
Sbjct: 318 DVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLI 377
Query: 372 KCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKV 431
+ ++ PD + +++A + +++ A K F ++K+ G P T+ TLIKGY K+
Sbjct: 378 SKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKI 437
Query: 432 NNLEKMMEIYDKM-RVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKA 490
LE+ + D M R ++PN ++ A+ + + A +M+S G PD
Sbjct: 438 GKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVT 497
Query: 491 KNIL 494
N L
Sbjct: 498 FNTL 501
Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 67/139 (48%), Gaps = 1/139 (0%)
Query: 373 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 432
C C D+ S T +++ + + A F L ++G P++ITY TL+ +
Sbjct: 310 CSGGTTCG-DVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQK 368
Query: 433 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKN 492
+ ++ + K+ NG+KP+ +F I++A ++ + D A+ +++M+ G P N
Sbjct: 369 HFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFN 428
Query: 493 ILLSLAKTADERNEANELL 511
L+ + E++ LL
Sbjct: 429 TLIKGYGKIGKLEESSRLL 447
>sp|Q9CAN6|PPR97_ARATH Pentatricopeptide repeat-containing protein At1g63070,
mitochondrial OS=Arabidopsis thaliana GN=At1g63070 PE=1
SV=1
Length = 590
Score = 154 bits (390), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 97/348 (27%), Positives = 174/348 (50%), Gaps = 7/348 (2%)
Query: 144 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 203
+I K+G+ + A +L+ M K VV + +++ + +A +F +M++ G
Sbjct: 221 VINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKG 280
Query: 204 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 263
+P TY ++ ++ +A + +L++ + PD F+ +I + K G
Sbjct: 281 IKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKN---INPDLVFFNALIDAFVKEGKLV 337
Query: 264 KARKLF-ALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALL 319
+A KL+ ++ + V YN+L+ YK V + ++ +M + GL + V+Y L
Sbjct: 338 EAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTL 397
Query: 320 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 379
I+ + +AR + A VF++M+ GV P YNILLD +G V+ A VF+ M++
Sbjct: 398 IHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDM 457
Query: 380 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 439
DI +YTTM+ A A +E F L G PNV+TY T++ G+ + E+
Sbjct: 458 KLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADA 517
Query: 440 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 487
++ +M+ +G PN + T++ A ++ D ++ KEM SCGF D
Sbjct: 518 LFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGD 565
Score = 150 bits (378), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 101/438 (23%), Positives = 208/438 (47%), Gaps = 13/438 (2%)
Query: 48 PRKFMQKRRKVEVFKDAADEAGKKNWRRLMNQIEEVGSAVAVLRSERTRGQPLPKDLVLG 107
PR + R F A+ + ++N R + Q ++ A+ L + + +P P +
Sbjct: 24 PRTTLCWERS---FAGASSDDCRENLSRKVLQDLKLDDAIG-LFGDMVKSRPFPSIVEFS 79
Query: 108 TLVR-LKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNK 166
L+ + ++ K+++V + E ++ N + + I + ++ + A +L M K
Sbjct: 80 KLLSAIAKMNKFDLVISLGEQMQ-NLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMK 138
Query: 167 KGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKE 226
GY PS+V+ +L+ + G R A A+ +M G +P +T+ ++ + NK E
Sbjct: 139 LGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASE 198
Query: 227 AEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNS 286
A + ++ + +PD + +I K G + A L M + ++ V YN+
Sbjct: 199 AVALVERMVVK---GCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNT 255
Query: 287 LMSFETNYKEVSKIYD---QMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAG 343
++ YK + +D +M+ G++PDV +Y LI+ R +A + +ML+
Sbjct: 256 IIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKN 315
Query: 344 VRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR-CSPDICSYTTMLSAYVNASDMEGA 402
+ P +N L+DAF G + +A ++ M + + C PD+ +Y T++ + +E
Sbjct: 316 INPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEG 375
Query: 403 EKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDA 462
+ FR + Q G V N +TY TLI G+ + + + ++ +M +G+ P+ + ++D
Sbjct: 376 MEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDG 435
Query: 463 YGKNKDFDSAVVWYKEME 480
N + ++A+V ++ M+
Sbjct: 436 LCNNGNVETALVVFEYMQ 453
Score = 99.0 bits (245), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 130/314 (41%), Gaps = 11/314 (3%)
Query: 188 RYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQK 247
+ +A +F M S P PS + + +L + NKF + L E+ L
Sbjct: 55 KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFD-----LVISLGEQMQNLGISHN 109
Query: 248 MFHMMIYM--YKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYD 302
++ I++ + + A + M + G S VT NSL++ + +S+ + D
Sbjct: 110 LYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVD 169
Query: 303 QMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISG 362
QM G QPD V++ L++ + + EA+A+ E M+ G +P Y +++ G
Sbjct: 170 QMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRG 229
Query: 363 MVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYG 422
D A + M + + D+ Y T++ M+ A F +++ G P+V TY
Sbjct: 230 EPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYN 289
Query: 423 TLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEM-ES 481
LI + M I P+ F ++DA+ K A Y EM +S
Sbjct: 290 PLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKS 349
Query: 482 CGFPPDQKAKNILL 495
PD A N L+
Sbjct: 350 KHCFPDVVAYNTLI 363
Score = 95.1 bits (235), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 116/260 (44%), Gaps = 3/260 (1%)
Query: 265 ARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLIN 321
A LF M + S V ++ L+S + V + +QMQ G+ ++ +Y++ IN
Sbjct: 59 AIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFIN 118
Query: 322 AYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSP 381
+ + + ALA+ +M+ G P+ N LL+ F + +A + M P
Sbjct: 119 YFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQP 178
Query: 382 DICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIY 441
D ++TT++ + A R+ G P+++TYG +I G K + + +
Sbjct: 179 DTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLL 238
Query: 442 DKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTA 501
+KM I+ + I+ TI+D K K D A + +ME+ G PD N L+S
Sbjct: 239 NKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNY 298
Query: 502 DERNEANELLGNFNHPNNEP 521
++A+ LL + N P
Sbjct: 299 GRWSDASRLLSDMLEKNINP 318
Score = 49.3 bits (116), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 41/76 (53%)
Query: 141 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 200
+ +I A K G + ++ KG P+VV++T +M + R G + A+A+F M+
Sbjct: 464 YTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMK 523
Query: 201 SSGPRPSALTYQIILK 216
GP P++ TY +++
Sbjct: 524 EDGPLPNSGTYNTLIR 539
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/146 (21%), Positives = 67/146 (45%), Gaps = 3/146 (2%)
Query: 139 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 198
M + +L+ G+ A V +M K+ +V++T ++EA + G+ ++ +F
Sbjct: 427 MTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCS 486
Query: 199 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 258
+ G +P+ +TY ++ F +EA+ +F+ + +E PL P+ ++ +I +
Sbjct: 487 LSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEM--KEDGPL-PNSGTYNTLIRARLR 543
Query: 259 AGGYEKARKLFALMAERGVQQSTVTY 284
G + +L M G T+
Sbjct: 544 DGDEAASAELIKEMRSCGFAGDASTF 569
>sp|Q0WVK7|PPR12_ARATH Pentatricopeptide repeat-containing protein At1g05670,
mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2
SV=1
Length = 741
Score = 154 bits (390), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 101/393 (25%), Positives = 171/393 (43%), Gaps = 41/393 (10%)
Query: 136 FNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAI 195
+N + ++I + G +A +L M KGY P V+S++ ++ Y R G +
Sbjct: 244 WNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKL 303
Query: 196 FRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYM 255
M+ G +P++ Y I+ L K EAEE F ++ + + PD ++ +I
Sbjct: 304 IEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMI---RQGILPDTVVYTTLIDG 360
Query: 256 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFET---NYKEVSKIYDQMQRAGLQPD 312
+ K G A K F M R + +TY +++S + E K++ +M GL+PD
Sbjct: 361 FCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPD 420
Query: 313 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 372
V++ LIN Y KA ++A V M+ AG P Y L+D G +D A +
Sbjct: 421 SVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLH 480
Query: 373 CMRRDRCSPDI----------C-------------------------SYTTMLSAYVNAS 397
M + P+I C +YTT++ AY +
Sbjct: 481 EMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSG 540
Query: 398 DMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFT 457
+M+ A++ + + G P ++T+ L+ G+ LE ++ + M GI PN T F
Sbjct: 541 EMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFN 600
Query: 458 TIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKA 490
+++ Y + +A YK+M S G PD K
Sbjct: 601 SLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKT 633
Score = 149 bits (377), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 91/343 (26%), Positives = 163/343 (47%), Gaps = 6/343 (1%)
Query: 156 KAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIIL 215
+AE+ S M ++G P V +T L++ + + G + A F M S P LTY I+
Sbjct: 334 EAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAII 393
Query: 216 KLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAER 275
F + EA ++F + + L+PD F +I Y KAG + A ++ M +
Sbjct: 394 SGFCQIGDMVEAGKLFHEMFCK---GLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQA 450
Query: 276 GVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEA 332
G + VTY +L + E + +++ +M + GLQP++ +Y ++N K+ EEA
Sbjct: 451 GCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEA 510
Query: 333 LAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSA 392
+ + E AG+ Y L+DA+ SG +D+A+ + K M P I ++ +++
Sbjct: 511 VKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNG 570
Query: 393 YVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPN 452
+ +E EK + G PN T+ +L+K Y NNL+ IY M G+ P+
Sbjct: 571 FCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPD 630
Query: 453 QTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 495
+ ++ + K ++ A ++EM+ GF ++L+
Sbjct: 631 GKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLI 673
Score = 143 bits (361), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 83/352 (23%), Positives = 175/352 (49%), Gaps = 6/352 (1%)
Query: 141 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 200
+ LI + K+GD A K M+ + P V+++TA++ + + G A +F M
Sbjct: 354 YTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMF 413
Query: 201 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 260
G P ++T+ ++ + +A K+A V ++ ++ P+ + +I K G
Sbjct: 414 CKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMI---QAGCSPNVVTYTTLIDGLCKEG 470
Query: 261 GYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYA 317
+ A +L M + G+Q + TYNS+ + N +E K+ + + AGL D V+Y
Sbjct: 471 DLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYT 530
Query: 318 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 377
L++AY K+ ++A + +EML G++PT +N+L++ F + GM++ + M
Sbjct: 531 TLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAK 590
Query: 378 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 437
+P+ ++ +++ Y ++++ A ++ + G P+ TY L+KG+ K N+++
Sbjct: 591 GIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEA 650
Query: 438 MEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQK 489
++ +M+ G + + ++ ++ + K K F A + +M G D++
Sbjct: 651 WFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKE 702
Score = 140 bits (352), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 80/332 (24%), Positives = 161/332 (48%), Gaps = 6/332 (1%)
Query: 168 GYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEA 227
G +V S+ ++ + GR K A + M+ G P ++Y ++ + +F E
Sbjct: 241 GVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYC---RFGEL 297
Query: 228 EEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL 287
++V+ + ++ LKP+ ++ +I + + +A + F+ M +G+ TV Y +L
Sbjct: 298 DKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTL 357
Query: 288 M---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGV 344
+ + + SK + +M + PDV++Y +I+ + + EA +F EM G+
Sbjct: 358 IDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGL 417
Query: 345 RPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEK 404
P + L++ + +G + A V M + CSP++ +YTT++ D++ A +
Sbjct: 418 EPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANE 477
Query: 405 FFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYG 464
+ + G PN+ TY +++ G K N+E+ +++ + G+ + +TT+MDAY
Sbjct: 478 LLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYC 537
Query: 465 KNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 496
K+ + D A KEM G P N+L++
Sbjct: 538 KSGEMDKAQEILKEMLGKGLQPTIVTFNVLMN 569
Score = 128 bits (321), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 95/377 (25%), Positives = 162/377 (42%), Gaps = 9/377 (2%)
Query: 152 GDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAI--FRRMQSSGPRPSAL 209
G +A +V M G SV S + + YK A AI FR G +
Sbjct: 189 GLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDC-YKTATAIIVFREFPEVGVCWNVA 247
Query: 210 TYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLF 269
+Y I++ + + KEA + + + E PD + ++ Y + G +K KL
Sbjct: 248 SYNIVIHFVCQLGRIKEAHHLLLLM---ELKGYTPDVISYSTVVNGYCRFGELDKVWKLI 304
Query: 270 ALMAERGVQQSTVTYNSLMSFET---NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKA 326
+M +G++ ++ Y S++ E + + +M R G+ PD V Y LI+ + K
Sbjct: 305 EVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKR 364
Query: 327 RREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSY 386
A F EM + P Y ++ F G + +A +F M PD ++
Sbjct: 365 GDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTF 424
Query: 387 TTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRV 446
T +++ Y A M+ A + + Q G PNV+TY TLI G K +L+ E+ +M
Sbjct: 425 TELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWK 484
Query: 447 NGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNE 506
G++PN + +I++ K+ + + AV E E+ G D L+ + E ++
Sbjct: 485 IGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDK 544
Query: 507 ANELLGNFNHPNNEPGI 523
A E+L +P I
Sbjct: 545 AQEILKEMLGKGLQPTI 561
Score = 102 bits (254), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 123/256 (48%), Gaps = 6/256 (2%)
Query: 130 IQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRY 189
IQ+ N + + LI K+GD + A ++L M K G P++ ++ +++ + G
Sbjct: 448 IQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNI 507
Query: 190 KNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMF 249
+ A + +++G +TY ++ + ++ + +A+E+ +L + L+P F
Sbjct: 508 EEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGK---GLQPTIVTF 564
Query: 250 HMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQR 306
++++ + G E KL M +G+ + T+NSL+ N K + IY M
Sbjct: 565 NVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCS 624
Query: 307 AGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQ 366
G+ PD +Y L+ + KAR +EA +F+EM G + Y++L+ F +
Sbjct: 625 RGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLE 684
Query: 367 ARTVFKCMRRDRCSPD 382
AR VF MRR+ + D
Sbjct: 685 AREVFDQMRREGLAAD 700
Score = 79.3 bits (194), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 100/208 (48%), Gaps = 6/208 (2%)
Query: 137 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 196
+ + + L+ AY K G+ +KA+++L M KG P++V+ LM + G ++ E +
Sbjct: 525 DTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLL 584
Query: 197 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 256
M + G P+A T+ ++K + N K A ++ D + PD K + ++ +
Sbjct: 585 NWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYK---DMCSRGVGPDGKTYENLVKGH 641
Query: 257 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDV 313
KA ++A LF M +G S TY+ L+ + E +++DQM+R GL D
Sbjct: 642 CKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADK 701
Query: 314 VSYALLINAYGKARREEEALAVFEEMLD 341
+ + K +R + + +E+++
Sbjct: 702 EIFDFFSDTKYKGKRPDTIVDPIDEIIE 729
>sp|Q9C8T7|PP101_ARATH Pentatricopeptide repeat-containing protein At1g63330
OS=Arabidopsis thaliana GN=At1g63330 PE=2 SV=2
Length = 559
Score = 153 bits (386), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 101/406 (24%), Positives = 199/406 (49%), Gaps = 10/406 (2%)
Query: 95 TRGQPLPKDLVLGTLVR-LKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGD 153
+ +PLP L+ + ++KK+++V + E ++ + N + +LI + ++
Sbjct: 2 VKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQ-RLGISHNLYTYNILINCFCRRSQ 60
Query: 154 FNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQI 213
+ A +L M K GY PS+V+ ++L+ Y G R +A A+ +M G RP +T+
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120
Query: 214 ILKLFVEANKFKEAEEVFMTLLDEE-KSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALM 272
++ NK EA + L+D + +P+ + +++ K G + A L M
Sbjct: 121 LIHGLFLHNKASEA----VALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKM 176
Query: 273 AERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYALLINAYGKARRE 329
++ V +N+++ Y+ V ++ +M+ G++P+VV+Y+ LI+ R
Sbjct: 177 EAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRW 236
Query: 330 EEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTM 389
+A + +M++ + P +N L+DAF G +A + M + PDI +Y ++
Sbjct: 237 SDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSL 296
Query: 390 LSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGI 449
++ + ++ A++ F + P++ TY TLIKG+ K +E E++ +M G+
Sbjct: 297 INGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGL 356
Query: 450 KPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 495
+ +TT++ + D D+A +K+M S G PPD +ILL
Sbjct: 357 VGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILL 402
Score = 142 bits (358), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 95/350 (27%), Positives = 167/350 (47%), Gaps = 6/350 (1%)
Query: 141 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 200
F +I + K + A + M KG P+VV++++L+ GR+ +A + M
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 247
Query: 201 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 260
P+ +T+ ++ FV+ KF EAE++ ++ K + PD ++ +I +
Sbjct: 248 EKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMI---KRSIDPDIFTYNSLINGFCMHD 304
Query: 261 GYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEV---SKIYDQMQRAGLQPDVVSYA 317
+KA+++F M + TYN+L+ K V ++++ +M GL D V+Y
Sbjct: 305 RLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYT 364
Query: 318 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 377
LI + A VF++M+ GV P Y+ILLD +G +++A VF M++
Sbjct: 365 TLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKS 424
Query: 378 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 437
DI YTTM+ A ++ F L G PNV+TY T+I G L++
Sbjct: 425 EIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEA 484
Query: 438 MEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 487
+ KM+ +G P+ + T++ A+ ++ D ++ +EM SC F D
Sbjct: 485 YALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGD 534
Score = 132 bits (333), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 85/369 (23%), Positives = 172/369 (46%), Gaps = 6/369 (1%)
Query: 130 IQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRY 189
+Q N + + +++ K+GD + A +L+ M VV ++++ +
Sbjct: 142 VQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHV 201
Query: 190 KNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMF 249
+A +F+ M++ G RP+ +TY ++ ++ +A ++ +++++ + P+ F
Sbjct: 202 DDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKK---INPNLVTF 258
Query: 250 HMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQR 306
+ +I + K G + +A KL M +R + TYNSL++ + + K +++ M
Sbjct: 259 NALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVS 318
Query: 307 AGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQ 366
PD+ +Y LI + K++R E+ +F EM G+ Y L+ G D
Sbjct: 319 KDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDN 378
Query: 367 ARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIK 426
A+ VFK M D PDI +Y+ +L N +E A + F +++ ++ Y T+I+
Sbjct: 379 AQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIE 438
Query: 427 GYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPP 486
G K ++ +++ + + G+KPN + T++ + A K+M+ G P
Sbjct: 439 GMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLP 498
Query: 487 DQKAKNILL 495
D N L+
Sbjct: 499 DSGTYNTLI 507
Score = 99.0 bits (245), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 121/255 (47%), Gaps = 3/255 (1%)
Query: 280 STVTYNSLMSFETNYKE---VSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVF 336
S +N L+S K+ V + ++MQR G+ ++ +Y +LIN + + + ALA+
Sbjct: 9 SIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALL 68
Query: 337 EEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNA 396
+M+ G P+ + LL+ + + A + M PD ++TT++
Sbjct: 69 GKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLH 128
Query: 397 SDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIF 456
+ A R+ Q G PN++TYG ++ G K +++ + +KM I+ + IF
Sbjct: 129 NKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIF 188
Query: 457 TTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNH 516
TI+D+ K + D A+ +KEME+ G P+ + L+S + ++A++LL +
Sbjct: 189 NTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIE 248
Query: 517 PNNEPGINGLSISVD 531
P + + +D
Sbjct: 249 KKINPNLVTFNALID 263
Score = 97.4 bits (241), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/317 (21%), Positives = 139/317 (43%), Gaps = 8/317 (2%)
Query: 199 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE-EKSPLKPDQKMFHMMIYMYK 257
M S P PS + +L + KF ++ ++L ++ ++ + + ++++I +
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKF----DLVISLGEKMQRLGISHNLYTYNILINCFC 56
Query: 258 KAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVV 314
+ A L M + G + S VT +SL++ + K +S + DQM G +PD +
Sbjct: 57 RRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTI 116
Query: 315 SYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCM 374
++ LI+ + EA+A+ + M+ G +P Y ++++ G +D A + M
Sbjct: 117 TFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKM 176
Query: 375 RRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNL 434
+ D+ + T++ + ++ A F+ ++ G PNV+TY +LI
Sbjct: 177 EAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRW 236
Query: 435 EKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNIL 494
++ M I PN F ++DA+ K F A + +M PD N L
Sbjct: 237 SDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSL 296
Query: 495 LSLAKTADERNEANELL 511
++ D ++A ++
Sbjct: 297 INGFCMHDRLDKAKQMF 313
>sp|Q9C9U0|PP118_ARATH Pentatricopeptide repeat-containing protein At1g73710
OS=Arabidopsis thaliana GN=At1g73710 PE=2 SV=1
Length = 991
Score = 152 bits (385), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 101/400 (25%), Positives = 191/400 (47%), Gaps = 19/400 (4%)
Query: 119 NVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTA 178
N+ SE+L +S + + F +I G G ++AE +L M +KG +P ++
Sbjct: 326 NLFSEML-----KSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEKGISPDTKTYNI 380
Query: 179 LMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEE 238
L+ + G + A +R+++ G P +T++ +L + + E E V + +
Sbjct: 381 LLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAEVEAVIAEM---D 437
Query: 239 KSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEV- 297
++ ++ D+ +++ MY G +A+ LF ER ++ +L + Y E
Sbjct: 438 RNSIRIDEHSVPVIMQMYVNEGLVVQAKALF----ERFQLDCVLSSTTLAAVIDVYAEKG 493
Query: 298 ------SKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAY 351
+ Y + +G + DV+ Y ++I AYGKA+ E+AL++F+ M + G P Y
Sbjct: 494 LWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTY 553
Query: 352 NILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQ 411
N L A +VD+A+ + M C P +Y M+++YV + A + +++
Sbjct: 554 NSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEK 613
Query: 412 DGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDS 471
G PN + YG+LI G+A+ +E+ ++ + M +G++ N + T+++ AY K +
Sbjct: 614 TGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEE 673
Query: 472 AVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 511
A Y +M+ PD A N +LSL +EA +
Sbjct: 674 ARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIF 713
Score = 121 bits (303), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 101/440 (22%), Positives = 192/440 (43%), Gaps = 54/440 (12%)
Query: 47 APRKFMQKRRKVEVFKDAADEAGKKNWRRLMNQIEEVGSAVAVL--RSERTRGQPLPKDL 104
A ++ +K RKV +F D + + EV + +A + S R +P +
Sbjct: 393 AALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIM 452
Query: 105 VL----GTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKV 160
+ G +V+ K L + R Q + +I Y ++G + +AE V
Sbjct: 453 QMYVNEGLVVQAKAL-----------FERFQLDCVLSSTTLAAVIDVYAEKGLWVEAETV 501
Query: 161 L-SFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFV 219
N G V+ + +++AYG+ ++ A ++F+ M++ G P TY + ++
Sbjct: 502 FYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLA 561
Query: 220 EANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQ 279
+ EA+ + +LD S KP K + MI Y + G
Sbjct: 562 GVDLVDEAQRILAEMLD---SGCKPGCKTYAAMIASYVRLG------------------- 599
Query: 280 STVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEM 339
L+S + +Y+ M++ G++P+ V Y LIN + ++ EEA+ F M
Sbjct: 600 -------LLS------DAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMM 646
Query: 340 LDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDM 399
+ GV+ H L+ A++ G +++AR V+ M+ PD+ + +MLS + +
Sbjct: 647 EEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIV 706
Query: 400 EGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTI 459
AE F L++ G +VI++ T++ Y + L++ +E+ ++MR +G+ + T F +
Sbjct: 707 SEAESIFNALREKG-TCDVISFATMMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQV 765
Query: 460 MDAYGKNKDFDSAVVWYKEM 479
M Y + + EM
Sbjct: 766 MACYAADGQLSECCELFHEM 785
Score = 107 bits (268), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 105/469 (22%), Positives = 190/469 (40%), Gaps = 57/469 (12%)
Query: 110 VRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGY 169
V LK+ +W V V + + + N + + +++ A G+ G +++ M G
Sbjct: 117 VLLKEQTRWERVLRVFRFFQSHQSYVPNVIHYNIVLRALGRAGKWDELRLCWIEMAHNGV 176
Query: 170 APSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEE 229
P+ ++ L++ YG+ G K A + M P +T ++++F + +F A+
Sbjct: 177 LPTNNTYGMLVDVYGKAGLVKEALLWIKHMGQRMHFPDEVTMATVVRVFKNSGEFDRADR 236
Query: 230 VF-----------MTLLDE------------------------------EKS-------- 240
F + +D+ EKS
Sbjct: 237 FFKGWCAGKVDLDLDSIDDFPKNGSAQSPVNLKQFLSMELFKVGARNPIEKSLHFASGSD 296
Query: 241 --PLKPD-QKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNY 294
P KP F+ +I +Y KAG A LF+ M + GV TVT+N+++ +
Sbjct: 297 SSPRKPRLTSTFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHL 356
Query: 295 KEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNIL 354
E + +M+ G+ PD +Y +L++ + A E AL + ++ G+ P + +
Sbjct: 357 SEAESLLKKMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAV 416
Query: 355 LDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGF 414
L MV + V M R+ D S ++ YVN + A+ F R + D
Sbjct: 417 LHILCQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCV 476
Query: 415 VPNVITYGTLIKGYA-KVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAV 473
+ + T +I YA K +E Y K ++G + + + ++ AYGK K + A+
Sbjct: 477 LSST-TLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKAL 535
Query: 474 VWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPG 522
+K M++ G PD+ N L + D +EA +L +PG
Sbjct: 536 SLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPG 584
Score = 89.7 bits (221), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 83/396 (20%), Positives = 167/396 (42%), Gaps = 74/396 (18%)
Query: 155 NKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQII 214
++A+++L+ M G P ++ A++ +Y R G +A ++ M+ +G +P+ + Y +
Sbjct: 567 DEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSL 626
Query: 215 LKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLF----- 269
+ F E+ +EA + F + E+ ++ + + +I Y K G E+AR+++
Sbjct: 627 INGFAESGMVEEAIQYFRMM---EEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKD 683
Query: 270 --------------ALMAERG-VQQSTVTYNSL--------MSFETN---YK------EV 297
+L A+ G V ++ +N+L +SF T YK E
Sbjct: 684 SEGGPDVAASNSMLSLCADLGIVSEAESIFNALREKGTCDVISFATMMYLYKGMGMLDEA 743
Query: 298 SKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEML----------------- 340
++ ++M+ +GL D S+ ++ Y + E +F EML
Sbjct: 744 IEVAEEMRESGLLSDCTSFNQVMACYAADGQLSECCELFHEMLVERKLLLDWGTFKTLFT 803
Query: 341 --------DAGVRPTHKAYN---------ILLDAFAISGMVDQARTVFKCMRRDRCSPDI 383
V AYN I F+ G+ A + + +
Sbjct: 804 LLKKGGVPSEAVSQLQTAYNEAKPLATPAITATLFSAMGLYAYALESCQELTSGEIPREH 863
Query: 384 CSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDK 443
+Y ++ Y + D++ A K + R+++ G P+++T L+ Y K +E + ++ +
Sbjct: 864 FAYNAVIYTYSASGDIDMALKAYMRMQEKGLEPDIVTQAYLVGIYGKAGMVEGVKRVHSR 923
Query: 444 MRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEM 479
+ ++P+Q++F + DAY D A V KEM
Sbjct: 924 LTFGELEPSQSLFKAVRDAYVSANRQDLADVVKKEM 959
Score = 73.2 bits (178), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 115/274 (41%), Gaps = 23/274 (8%)
Query: 287 LMSFETNYKEVSKIYDQMQ-RAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVR 345
L+ +T ++ V +++ Q P+V+ Y +++ A G+A + +E + EM GV
Sbjct: 118 LLKEQTRWERVLRVFRFFQSHQSYVPNVIHYNIVLRALGRAGKWDELRLCWIEMAHNGVL 177
Query: 346 PTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKF 405
PT+ Y +L+D + +G+V +A K M + PD + T++ + N+ + + A++F
Sbjct: 178 PTNNTYGMLVDVYGKAGLVKEALLWIKHMGQRMHFPDEVTMATVVRVFKNSGEFDRADRF 237
Query: 406 FRR---------------LKQDGFVPNVITYGT-----LIKGYAKVNNLEKMMEIYDKMR 445
F+ ++G + + L K A+ N +EK +
Sbjct: 238 FKGWCAGKVDLDLDSIDDFPKNGSAQSPVNLKQFLSMELFKVGAR-NPIEKSLHFASGSD 296
Query: 446 VNGIKPNQT-IFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADER 504
+ KP T F T++D YGK + A + EM G P D N ++ T
Sbjct: 297 SSPRKPRLTSTFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHL 356
Query: 505 NEANELLGNFNHPNNEPGINGLSISVDEEDDDDD 538
+EA LL P +I + D D
Sbjct: 357 SEAESLLKKMEEKGISPDTKTYNILLSLHADAGD 390
>sp|Q5G1S8|PP241_ARATH Pentatricopeptide repeat-containing protein At3g18110,
chloroplastic OS=Arabidopsis thaliana GN=EMB1270 PE=2
SV=2
Length = 1440
Score = 151 bits (381), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 136/545 (24%), Positives = 229/545 (42%), Gaps = 100/545 (18%)
Query: 49 RKFMQKRRKVEVFKDAADEAGKKNWRRLMNQIEEVGSAVAVLRSERTRGQPLPKDLVLGT 108
R+ ++K KV + K K+WR +++ + + L+S + L LV T
Sbjct: 106 RRRVKKMNKVALIK-------AKDWR---ERVKFLTDKILSLKSNQFVADILDARLVQMT 155
Query: 109 ------LVRLKQLKKWNVVSEVLEWLRIQSW-----------------WDFNEMDFLMLI 145
+V+ + W EV EWL ++ W W+ + +
Sbjct: 156 PTDYCFVVKSVGQESWQRALEVFEWLNLRHWHSPNARMVAAILGVLGRWNQESLAVEIFT 215
Query: 146 TA-----------------YGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEA-YGRGG 187
A Y + G F+KA++++ M ++G P ++S L+ A GG
Sbjct: 216 RAEPTVGDRVQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGG 275
Query: 188 RYKN-AEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQ 246
N A + +++SG RP A+TY +L + A +VF D E +PD
Sbjct: 276 LTPNLAVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFE---DMEAHRCQPDL 332
Query: 247 KMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQ 303
++ MI +Y + G +A +LF + +G VTYNSL+ + E N ++V ++Y Q
Sbjct: 333 WTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQ 392
Query: 304 MQRAGL------------------------------------QPDVVSYALLINAYGKAR 327
MQ+ G PD ++Y +LI++ GKA
Sbjct: 393 MQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKAN 452
Query: 328 REEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYT 387
R EA A+ EMLD G++PT + Y+ L+ +A +G ++A F CM R PD +Y+
Sbjct: 453 RTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYS 512
Query: 388 TMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME-IYDKMRV 446
ML + ++ A +R + DG P+ Y +I G K N + + + I D +
Sbjct: 513 VMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMILGLMKENRSDDIQKTIRDMEEL 572
Query: 447 NGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNE 506
G+ P + I K + FD A K + G+ + +L ++ +E
Sbjct: 573 CGMNPLE-----ISSVLVKGECFDLAARQLKVAITNGYELENDTLLSILGSYSSSGRHSE 627
Query: 507 ANELL 511
A ELL
Sbjct: 628 AFELL 632
Score = 145 bits (366), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 104/403 (25%), Positives = 187/403 (46%), Gaps = 35/403 (8%)
Query: 144 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 203
+I AYGKQ + KAE V+ + + G P + + +LM AY + G Y+ A AIF M G
Sbjct: 758 IIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDG 817
Query: 204 PRPSALTYQIIL----------KLFVEANK-----FKEAEEVFMTLLD---------EEK 239
P P+ + I+L +L+V + FK ++ + +LD E K
Sbjct: 818 PSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVK 877
Query: 240 ---SPLK-----PDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFE 291
S +K P +++ MMI + K A + + M E + +NS++
Sbjct: 878 KIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMY 937
Query: 292 T---NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTH 348
T +YK+ ++Y +++ GL+PD +Y LI Y + RR EE + ++M + G+ P
Sbjct: 938 TAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKL 997
Query: 349 KAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRR 408
Y L+ AF ++QA +F+ + D Y TM+ ++ AEK +
Sbjct: 998 DTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQM 1057
Query: 409 LKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKD 468
+K G P + T L+ Y+ N ++ ++ ++ ++ +++++DAY ++KD
Sbjct: 1058 MKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDAYLRSKD 1117
Query: 469 FDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 511
++S + EM+ G PD + + A + E+ E LL
Sbjct: 1118 YNSGIERLLEMKKEGLEPDHRIWTCFVRAASFSKEKIEVMLLL 1160
Score = 115 bits (289), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 77/345 (22%), Positives = 168/345 (48%), Gaps = 6/345 (1%)
Query: 143 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 202
+L+ A G + V+ + G+ S S +++A+ R G + I+ M+++
Sbjct: 827 ILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAA 886
Query: 203 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 262
G P+ Y+++++L + + ++AE + + + E++ K + +++ M+ MY Y
Sbjct: 887 GYLPTIRLYRMMIELLCKGKRVRDAE---IMVSEMEEANFKVELAIWNSMLKMYTAIEDY 943
Query: 263 EKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIY---DQMQRAGLQPDVVSYALL 319
+K +++ + E G++ TYN+L+ + + Y QM+ GL P + +Y L
Sbjct: 944 KKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSL 1003
Query: 320 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 379
I+A+GK + E+A +FEE+L G++ Y+ ++ SG +A + + M+
Sbjct: 1004 ISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGI 1063
Query: 380 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 439
P + + ++ +Y ++ + + AEK LK + Y ++I Y + + +E
Sbjct: 1064 EPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDAYLRSKDYNSGIE 1123
Query: 440 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGF 484
+M+ G++P+ I+T + A +K+ ++ K +E GF
Sbjct: 1124 RLLEMKKEGLEPDHRIWTCFVRAASFSKEKIEVMLLLKALEDIGF 1168
Score = 107 bits (266), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 80/379 (21%), Positives = 173/379 (45%), Gaps = 7/379 (1%)
Query: 154 FNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPR-PSALTYQ 212
+ +A +V S + G S +++ Y + G + A + + ++ G + Y
Sbjct: 697 YAEASQVFSDLRLSGCEASESVCKSMVVVYCKLGFPETAHQVVNQAETKGFHFACSPMYT 756
Query: 213 IILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALM 272
I++ + + +++AE V L +S PD K ++ ++ Y + G YE+AR +F M
Sbjct: 757 DIIEAYGKQKLWQKAESVVGNL---RQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTM 813
Query: 273 AERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARRE 329
G + + N L+ + +E+ + +++Q G + S L+++A+ +A
Sbjct: 814 MRDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNI 873
Query: 330 EEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTM 389
E ++ M AG PT + Y ++++ V A + M ++ + +M
Sbjct: 874 FEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSM 933
Query: 390 LSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGI 449
L Y D + + ++R+K+ G P+ TY TLI Y + E+ + +MR G+
Sbjct: 934 LKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGL 993
Query: 450 KPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANE 509
P + +++ A+GK K + A ++E+ S G D+ + ++ +++ + ++A +
Sbjct: 994 DPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEK 1053
Query: 510 LLGNFNHPNNEPGINGLSI 528
LL + EP + + +
Sbjct: 1054 LLQMMKNAGIEPTLATMHL 1072
Score = 89.4 bits (220), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 84/416 (20%), Positives = 165/416 (39%), Gaps = 73/416 (17%)
Query: 154 FNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAI--FRRMQSSGPR------ 205
F+ A + L GY + +++ +Y GR+ A + F + +SG +
Sbjct: 590 FDLAARQLKVAITNGYELENDTLLSILGSYSSSGRHSEAFELLEFLKEHASGSKRLITEA 649
Query: 206 -----------------------------PSALTYQIILKLFVEANKFKEAEEVFMTL-- 234
S+ Y+ +L V + EA +VF L
Sbjct: 650 LIVLHCKVNNLSAALDEYFADPCVHGWCFGSSTMYETLLHCCVANEHYAEASQVFSDLRL 709
Query: 235 --LDEEKSPLK---------------------PDQKMFHM--------MIYMYKKAGGYE 263
+ +S K + K FH +I Y K ++
Sbjct: 710 SGCEASESVCKSMVVVYCKLGFPETAHQVVNQAETKGFHFACSPMYTDIIEAYGKQKLWQ 769
Query: 264 KARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLI 320
KA + + + G T+NSLMS Y+ I++ M R G P V S +L+
Sbjct: 770 KAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILL 829
Query: 321 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 380
+A R EE V EE+ D G + + + ++LDAFA +G + + + ++ M+
Sbjct: 830 HALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYL 889
Query: 381 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 440
P I Y M+ + AE +++ F + + +++K Y + + +K +++
Sbjct: 890 PTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQV 949
Query: 441 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 496
Y +++ G++P++T + T++ Y +++ + + ++M + G P L+S
Sbjct: 950 YQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLIS 1005
Score = 79.7 bits (195), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 94/437 (21%), Positives = 164/437 (37%), Gaps = 55/437 (12%)
Query: 137 NEMDFLMLITAYGKQGDFNKAEKVLSFMNK-KGYAPSVVSHTALMEAYGRGGRYKNAEAI 195
+EM + +I YGKQG + A ++ M G P +++T L+++ G+ R A A+
Sbjct: 401 DEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAAL 460
Query: 196 FRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYM 255
M G +P+ TY ++ + +A K +EAE+ F +L +S KPD + +M+ +
Sbjct: 461 MSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCML---RSGTKPDNLAYSVMLDV 517
Query: 256 YKKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSK-IYDQMQRAGLQP 311
+ KA L+ M G S Y + + E ++ K I D + G+ P
Sbjct: 518 LLRGNETRKAWGLYRDMISDGHTPSYTLYELMILGLMKENRSDDIQKTIRDMEELCGMNP 577
Query: 312 DVVSYAL------------------------------LINAYGKARREEEALAVFE---E 338
+S L ++ +Y + R EA + E E
Sbjct: 578 LEISSVLVKGECFDLAARQLKVAITNGYELENDTLLSILGSYSSSGRHSEAFELLEFLKE 637
Query: 339 MLDAGVRPTHKAYNIL-LDAFAISGMVDQARTVFKCMRRDRCSPDIC-----SYTTMLSA 392
R +A +L +S +D+ D C C Y T+L
Sbjct: 638 HASGSKRLITEALIVLHCKVNNLSAALDEYFA-------DPCVHGWCFGSSTMYETLLHC 690
Query: 393 YVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIK-P 451
V A + F L+ G + +++ Y K+ E ++ ++ G
Sbjct: 691 CVANEHYAEASQVFSDLRLSGCEASESVCKSMVVVYCKLGFPETAHQVVNQAETKGFHFA 750
Query: 452 NQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 511
++T I++AYGK K + A + G PD K N L+S A +
Sbjct: 751 CSPMYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIF 810
Query: 512 GNFNHPNNEPGINGLSI 528
P + ++I
Sbjct: 811 NTMMRDGPSPTVESINI 827
Score = 70.5 bits (171), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 76/394 (19%), Positives = 149/394 (37%), Gaps = 48/394 (12%)
Query: 144 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 203
LI Y K G +AE S M + G P ++++ +++ RG + A ++R M S G
Sbjct: 479 LICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDG 538
Query: 204 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEK----SPLKPDQKMFH--------- 250
PS Y++++ ++ N+ ++++ T+ D E+ +PL+ +
Sbjct: 539 HTPSYTLYELMILGLMKENR---SDDIQKTIRDMEELCGMNPLEISSVLVKGECFDLAAR 595
Query: 251 ------------------MMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFET 292
++ Y +G + +A +L + E + +L+
Sbjct: 596 QLKVAITNGYELENDTLLSILGSYSSSGRHSEAFELLEFLKEHASGSKRLITEALIVLHC 655
Query: 293 NYKEVSKIYDQ-----MQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPT 347
+S D+ Y L++ EA VF ++ +G +
Sbjct: 656 KVNNLSAALDEYFADPCVHGWCFGSSTMYETLLHCCVANEHYAEASQVFSDLRLSGCEAS 715
Query: 348 HKAYNILLDAFAISGMVDQARTVFKCMRRD----RCSPDICSYTTMLSAYVNASDMEGAE 403
++ + G + A V CSP YT ++ AY + AE
Sbjct: 716 ESVCKSMVVVYCKLGFPETAHQVVNQAETKGFHFACSP---MYTDIIEAYGKQKLWQKAE 772
Query: 404 KFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAY 463
L+Q G P++ T+ +L+ YA+ E+ I++ M +G P ++ A
Sbjct: 773 SVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHAL 832
Query: 464 GKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSL 497
+ + V +E++ GF + + ILL L
Sbjct: 833 CVDGRLEELYVVVEELQDMGFKISKSS--ILLML 864
>sp|Q9LMY5|PPR41_ARATH Putative pentatricopeptide repeat-containing protein At1g13630
OS=Arabidopsis thaliana GN=At1g13630 PE=2 SV=3
Length = 826
Score = 151 bits (381), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 98/375 (26%), Positives = 177/375 (47%), Gaps = 9/375 (2%)
Query: 127 WLRIQSWWDF--NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYG 184
+LR W D + + F +++ Y K G + A+ + K G PSV SH L+
Sbjct: 251 FLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLC 310
Query: 185 RGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKP 244
G A + M G P ++TY I+ K F A EV +LD+ L P
Sbjct: 311 LVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDK---GLSP 367
Query: 245 DQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM----SFETNYKEVSKI 300
D + +++ + G + L M RG + +++ S+M E +
Sbjct: 368 DVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSL 427
Query: 301 YDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAI 360
++QM+ GL PD+V+Y+++I+ K + + AL +++EM D + P + + LL
Sbjct: 428 FNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQ 487
Query: 361 SGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVIT 420
GM+ +AR++ + + DI Y ++ Y + +E A + F+ + + G P+V T
Sbjct: 488 KGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVAT 547
Query: 421 YGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEME 480
+ +LI GY K N+ + +I D +++ G+ P+ +TT+MDAY + S +EM+
Sbjct: 548 FNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMK 607
Query: 481 SCGFPPDQKAKNILL 495
+ G PP +++
Sbjct: 608 AEGIPPTNVTYSVIF 622
Score = 101 bits (251), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/357 (22%), Positives = 155/357 (43%), Gaps = 18/357 (5%)
Query: 143 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 202
++++ K G ++A + + M G +P +V+++ ++ + G++ A ++ M
Sbjct: 410 VMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDK 469
Query: 203 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 262
P++ T+ +L + EA + +L+ ++ D +++++I Y K+G
Sbjct: 470 RILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETL---DIVLYNIVIDGYAKSGCI 526
Query: 263 EKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALL 319
E+A +LF ++ E G+ S T+NSL+ N E KI D ++ GL P VVSY L
Sbjct: 527 EEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTL 586
Query: 320 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAI------SGMVDQARTVFKC 373
++AY + + EM G+ PT+ Y+++ V + R KC
Sbjct: 587 MDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKC 646
Query: 374 ------MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKG 427
M + PD +Y T++ + GA F +K + TY LI
Sbjct: 647 KQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDS 706
Query: 428 YAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGF 484
+ K ++ + ++ +TT++ A+ D + AV + ++ GF
Sbjct: 707 LCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGF 763
Score = 89.7 bits (221), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 75/363 (20%), Positives = 147/363 (40%), Gaps = 53/363 (14%)
Query: 143 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 202
++I K G F+ A + M K P+ +H AL+ + G A ++ + SS
Sbjct: 445 IVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISS 504
Query: 203 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 262
G + Y I++ + ++ +EA E+F +++ + + P F+ +IY Y K
Sbjct: 505 GETLDIVLYNIVIDGYAKSGCIEEALELFKVVIE---TGITPSVATFNSLIYGYCKTQNI 561
Query: 263 EKARKLFALMAERGVQQSTVTYNSLM-----------------------------SFETN 293
+ARK+ ++ G+ S V+Y +LM ++
Sbjct: 562 AEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVI 621
Query: 294 YKEVSK--------------IYDQ-------MQRAGLQPDVVSYALLINAYGKARREEEA 332
+K + + I+++ M+ G+ PD ++Y +I + + A
Sbjct: 622 FKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGA 681
Query: 333 LAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSA 392
E M + + YNIL+D+ + G + +A + ++ S +YTT++ A
Sbjct: 682 FVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKA 741
Query: 393 YVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPN 452
+ D E A K F +L GF ++ Y +I + + + + + M GI P+
Sbjct: 742 HCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRRHLVNESKFFFCLMLSQGISPD 801
Query: 453 QTI 455
I
Sbjct: 802 LDI 804
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 103/260 (39%), Gaps = 32/260 (12%)
Query: 262 YEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLIN 321
+++ R ++A R ST+ + +++ + +KE+ I +Q+ LQ + LL N
Sbjct: 105 FKELRDIYAF---RHSSFSTLLVSHVLAGQRRFKELQVILEQL----LQEEGTLCELLSN 157
Query: 322 AYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSP 381
++ R+ E V++ +L R MVD + + K M+ +
Sbjct: 158 SF---RKWESTGLVWDMLLFLSSRLR---------------MVDDSLYILKKMKDQNLNV 199
Query: 382 DICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIY 441
SY ++L + M ++ +K N TY T++ G + LE +
Sbjct: 200 STQSYNSVLYHFRETDKMWDV---YKEIKD----KNEHTYSTVVDGLCRQQKLEDAVLFL 252
Query: 442 DKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTA 501
I P+ F +IM Y K D A ++ + CG P + NIL++
Sbjct: 253 RTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLV 312
Query: 502 DERNEANELLGNFNHPNNEP 521
EA EL + N EP
Sbjct: 313 GSIAEALELASDMNKHGVEP 332
>sp|Q9ZU27|PPR76_ARATH Pentatricopeptide repeat-containing protein At1g51965,
mitochondrial OS=Arabidopsis thaliana GN=At1g51965 PE=2
SV=1
Length = 650
Score = 150 bits (378), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 96/361 (26%), Positives = 171/361 (47%), Gaps = 9/361 (2%)
Query: 137 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 196
+E + ++I G+ G ++A + + M +G +VV + LM+ +G A +F
Sbjct: 269 DEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVF 328
Query: 197 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 256
RM +G RP+ TY ++L L V + + V E S Q ++ ++
Sbjct: 329 SRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVV------EISKRYMTQGIYSYLVRTL 382
Query: 257 KKAGGYEKARKLFALMAERGVQQSTVTYNSLM-SFETNYKEVSKI--YDQMQRAGLQPDV 313
K G +A +LF M V+ +Y S++ S K + I ++ G+ D
Sbjct: 383 SKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDT 442
Query: 314 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 373
+ Y + +A GK ++ +FE+M G P YNIL+ +F G VD+A +F+
Sbjct: 443 MMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEE 502
Query: 374 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 433
+ R C PDI SY ++++ D++ A F+ +++ G P+V+TY TL++ + K
Sbjct: 503 LERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTER 562
Query: 434 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 493
+E ++++M V G +PN + ++D KN AV Y +M+ G PD +
Sbjct: 563 VEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITYTV 622
Query: 494 L 494
L
Sbjct: 623 L 623
Score = 112 bits (279), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/406 (21%), Positives = 179/406 (44%), Gaps = 8/406 (1%)
Query: 128 LRIQSWWDF--NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGR 185
LR+ WD N + L+ AY + D++KA V + + G+ + ++ L++A +
Sbjct: 191 LRLVKKWDLKMNSFTYKCLLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDALAK 250
Query: 186 GGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPD 245
+ A +F M+ R TY I+++ K EA +F ++ E L +
Sbjct: 251 D---EKACQVFEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITE---GLTLN 304
Query: 246 QKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQ 305
++ ++ + K +KA ++F+ M E G + + TY+ L++ ++ ++ ++
Sbjct: 305 VVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVE 364
Query: 306 RAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVD 365
+ Y+ L+ K EA +F +M V+ +Y +L++ +G
Sbjct: 365 ISKRYMTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTI 424
Query: 366 QARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLI 425
+A + + D Y T+ SA + F ++K+DG P++ TY LI
Sbjct: 425 EAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILI 484
Query: 426 KGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFP 485
+ +V +++ + I++++ + KP+ + ++++ GKN D D A V +KEM+ G
Sbjct: 485 ASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLN 544
Query: 486 PDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 531
PD + L+ + A L +P I +I +D
Sbjct: 545 PDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLD 590
Score = 81.3 bits (199), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/386 (19%), Positives = 154/386 (39%), Gaps = 38/386 (9%)
Query: 188 RYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQK 247
R+ +I M S + T I++ F E++ M L +K LK +
Sbjct: 151 RFDRVRSILDSMVKSNVHGNISTVNILIGFF------GNTEDLQMCLRLVKKWDLKMNSF 204
Query: 248 MFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRA 307
+ ++ Y ++ Y KA ++ + G + YN L+ ++ ++++ M++
Sbjct: 205 TYKCLLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDALAKDEKACQVFEDMKKR 264
Query: 308 GLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQA 367
+ D +Y ++I G+ + +EA+ +F EM+ G+ YN L+ A MVD+A
Sbjct: 265 HCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKA 324
Query: 368 RTVFKCMRRDRCSPDICSYTTMLSAYVNASDM---EGAEKFFRRLKQDGFVPNVI----- 419
VF M C P+ +Y+ +L+ V + +G + +R G ++
Sbjct: 325 IQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKRYMTQGIYSYLVRTLSK 384
Query: 420 ------------------------TYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTI 455
+Y ++++ + +E+ K+ G+ + +
Sbjct: 385 LGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMM 444
Query: 456 FTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFN 515
+ T+ A GK K +++M+ G PD NIL++ E +EA +
Sbjct: 445 YNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELE 504
Query: 516 HPNNEPGINGLSISVDEEDDDDDDDE 541
+ +P I + ++ + D DE
Sbjct: 505 RSDCKPDIISYNSLINCLGKNGDVDE 530
Score = 41.2 bits (95), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 38/74 (51%)
Query: 144 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 203
L+ +GK A + M KG P++V++ L++ + GR A ++ +M+ G
Sbjct: 553 LMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQG 612
Query: 204 PRPSALTYQIILKL 217
P ++TY ++ +L
Sbjct: 613 LTPDSITYTVLERL 626
>sp|Q9LS88|PP250_ARATH Pentatricopeptide repeat-containing protein At3g23020
OS=Arabidopsis thaliana GN=At3g23020 PE=2 SV=1
Length = 842
Score = 150 bits (378), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 106/404 (26%), Positives = 198/404 (49%), Gaps = 19/404 (4%)
Query: 110 VRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGY 169
+ LK+ W E+ EW + + ++ N + + +++ GK + + + M +KG
Sbjct: 159 IILKEQIHWERAVEIFEWFKSKGCYELNVIHYNIMLRILGKACKWRYVQSLWDEMIRKGI 218
Query: 170 APSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEE 229
P ++ L++ Y +GG +A +M G +P +T I+L+++ +A +F++AEE
Sbjct: 219 KPINSTYGTLIDVYSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEE 278
Query: 230 VFMTL-LDEEK--SPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNS 286
F DE K S + ++ MI Y K+G ++A + F M E G+ +TVT+N+
Sbjct: 279 FFKKWSCDENKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNT 338
Query: 287 LMSFETNYKEVSKIYDQMQRAGLQ--PDVVSYALLINAYGKARREEEALAVFEEMLDAGV 344
++ N ++ ++ M+ L PD +Y +LI+ + K E A A F+EM D G+
Sbjct: 339 MIHIYGNNGQLGEVTSLMKTMKLHCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGL 398
Query: 345 RPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEK 404
+P +Y LL AF+I MV++A + M D D + + + YV A +E +
Sbjct: 399 KPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWS 458
Query: 405 FFRR------LKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTT 458
+F+R + +G+ N+ YG +GY ++ E++ ++ K +
Sbjct: 459 WFKRFHVAGNMSSEGYSANIDAYGE--RGY--LSEAERVFICCQEVN----KRTVIEYNV 510
Query: 459 IMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTAD 502
++ AYG +K + A ++ M S G PD+ N L+ + +AD
Sbjct: 511 MIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASAD 554
Score = 128 bits (322), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 102/448 (22%), Positives = 183/448 (40%), Gaps = 61/448 (13%)
Query: 115 LKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVV 174
KKW+ + S + +N M I YGK G +A + M ++G P+ V
Sbjct: 280 FKKWSCDENKADSHVCLSSYTYNTM-----IDTYGKSGQIKEASETFKRMLEEGIVPTTV 334
Query: 175 SHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTL 234
+ ++ YG G+ ++ + M+ P TY I++ L + N + A F +
Sbjct: 335 TFNTMIHIYGNNGQLGEVTSLMKTMKLHCA-PDTRTYNILISLHTKNNDIERAGAYFKEM 393
Query: 235 LDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNY 294
D+ LKPD + ++Y + E+A L A M + V+ T ++L
Sbjct: 394 KDD---GLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDDNVEIDEYTQSALTRMYVEA 450
Query: 295 KEVSKIYDQMQRAGLQPD------------------------------------VVSYAL 318
+ + K + +R + + V+ Y +
Sbjct: 451 EMLEKSWSWFKRFHVAGNMSSEGYSANIDAYGERGYLSEAERVFICCQEVNKRTVIEYNV 510
Query: 319 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 378
+I AYG ++ E+A +FE M+ GV P YN L+ A + M + R + MR
Sbjct: 511 MIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETG 570
Query: 379 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 438
D Y ++S++V + AE+ ++ + + P+V+ YG LI +A N+++ M
Sbjct: 571 YVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAM 630
Query: 439 EIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSA-VVWYKEMESCGFP--PDQKAKNILL 495
+ M+ GI N I+ +++ Y K D A ++ K ++SC PD N ++
Sbjct: 631 SYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMI 690
Query: 496 SLAK-------------TADERNEANEL 510
+L + +R EANE
Sbjct: 691 NLYSERSMVRKAEAIFDSMKQRGEANEF 718
Score = 110 bits (274), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 157/331 (47%), Gaps = 20/331 (6%)
Query: 164 MNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANK 223
M+ +GY+ ++ +AYG G AE +F Q R + + Y +++K + +
Sbjct: 469 MSSEGYSANI-------DAYGERGYLSEAERVFICCQEVNKR-TVIEYNVMIKAYGISKS 520
Query: 224 FKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVT 283
++A E+F +++ + PD+ ++ ++ + A K R M E G +
Sbjct: 521 CEKACELFESMMS---YGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIP 577
Query: 284 YNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEML 340
Y +++S +++ ++Y +M ++PDVV Y +LINA+ ++A++ E M
Sbjct: 578 YCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMK 637
Query: 341 DAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS----PDICSYTTMLSAYVNA 396
+AG+ YN L+ + G +D+A +++ + + C+ PD+ + M++ Y
Sbjct: 638 EAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQS-CNKTQYPDVYTSNCMINLYSER 696
Query: 397 SDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIF 456
S + AE F +KQ G N T+ ++ Y K E+ +I +MR I + +
Sbjct: 697 SMVRKAEAIFDSMKQRG-EANEFTFAMMLCMYKKNGRFEEATQIAKQMREMKILTDPLSY 755
Query: 457 TTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 487
+++ + + F AV +KEM S G PD
Sbjct: 756 NSVLGLFALDGRFKEAVETFKEMVSSGIQPD 786
Score = 87.0 bits (214), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 118/260 (45%), Gaps = 2/260 (0%)
Query: 141 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 200
+ +I+++ K G N AE+V M + P VV + L+ A+ G + A + M+
Sbjct: 578 YCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMK 637
Query: 201 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 260
+G +++ Y ++KL+ + EAE ++ LL PD + MI +Y +
Sbjct: 638 EAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERS 697
Query: 261 GYEKARKLFALMAERGVQQSTVTYNSLMSFETN--YKEVSKIYDQMQRAGLQPDVVSYAL 318
KA +F M +RG L ++ N ++E ++I QM+ + D +SY
Sbjct: 698 MVRKAEAIFDSMKQRGEANEFTFAMMLCMYKKNGRFEEATQIAKQMREMKILTDPLSYNS 757
Query: 319 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 378
++ + R +EA+ F+EM+ +G++P + L GM +A + +R+
Sbjct: 758 VLGLFALDGRFKEAVETFKEMVSSGIQPDDSTFKSLGTILMKLGMSKKAVRKIEEIRKKE 817
Query: 379 CSPDICSYTTMLSAYVNASD 398
+ + + LS+ V D
Sbjct: 818 IKRGLELWISTLSSLVGIGD 837
Score = 47.8 bits (112), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 50/98 (51%), Gaps = 4/98 (4%)
Query: 137 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 196
NE F M++ Y K G F +A ++ M + +S+ +++ + GR+K A F
Sbjct: 716 NEFTFAMMLCMYKKNGRFEEATQIAKQMREMKILTDPLSYNSVLGLFALDGRFKEAVETF 775
Query: 197 RRMQSSGPRPSALTYQ----IILKLFVEANKFKEAEEV 230
+ M SSG +P T++ I++KL + ++ EE+
Sbjct: 776 KEMVSSGIQPDDSTFKSLGTILMKLGMSKKAVRKIEEI 813
>sp|P0C7Q7|PPR38_ARATH Putative pentatricopeptide repeat-containing protein At1g12700,
mitochondrial OS=Arabidopsis thaliana GN=At1g12700 PE=3
SV=1
Length = 602
Score = 149 bits (377), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 87/357 (24%), Positives = 175/357 (49%), Gaps = 6/357 (1%)
Query: 144 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 203
+I + + G + A + M KG SVV++ +L+ + G++ + + + M S
Sbjct: 234 IIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSRE 293
Query: 204 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 263
P+ +T+ ++L +FV+ K +EA E++ ++ + P+ ++ ++ Y
Sbjct: 294 IVPNVITFNVLLDVFVKEGKLQEANELYKEMITR---GISPNIITYNTLMDGYCMQNRLS 350
Query: 264 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYALLI 320
+A + LM VT+ SL+ K V K++ + + GL + V+Y++L+
Sbjct: 351 EANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILV 410
Query: 321 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 380
+ ++ + + A +F+EM+ GV P Y ILLD +G +++A +F+ +++ +
Sbjct: 411 QGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMD 470
Query: 381 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 440
I YTT++ +E A F L G PNV+TY +I G K +L + +
Sbjct: 471 LGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANIL 530
Query: 441 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSL 497
KM +G PN + T++ A+ ++ D ++ +EM+SCGF D + +++ +
Sbjct: 531 LRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDM 587
Score = 139 bits (350), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 105/475 (22%), Positives = 205/475 (43%), Gaps = 44/475 (9%)
Query: 86 AVAVLRSERTRGQPLPKDLVLGTLVR-LKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLML 144
A+A+ + E R +PLP + + + K++N+V + + L + N ++
Sbjct: 72 AIALFQ-EMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAH-NIYTLNIM 129
Query: 145 ITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGP 204
I + + A VL + K GY P + L++ G+ A + RM +G
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC 189
Query: 205 RPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEK 264
+P +TY I+ + A ++ + E+ +K D + +I + G +
Sbjct: 190 QPDVVTYNSIVNGICRSGDTSLALDLLRKM---EERNVKADVFTYSTIIDSLCRDGCIDA 246
Query: 265 ARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLIN 321
A LF M +G++ S VTYNSL + + + + + M + P+V+++ +L++
Sbjct: 247 AISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLD 306
Query: 322 AYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSP 381
+ K + +EA +++EM+ G+ P YN L+D + + + +A + M R++CSP
Sbjct: 307 VFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSP 366
Query: 382 DICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFV-------------------------- 415
DI ++T+++ Y ++ K FR + + G V
Sbjct: 367 DIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELF 426
Query: 416 ---------PNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKN 466
P+V+TYG L+ G LEK +EI++ ++ + + ++TTI++ K
Sbjct: 427 QEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKG 486
Query: 467 KDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEP 521
+ A + + G P+ +++S +EAN LL N P
Sbjct: 487 GKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAP 541
Score = 104 bits (260), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/336 (21%), Positives = 158/336 (47%), Gaps = 9/336 (2%)
Query: 83 VGSAVAVLRSERTRGQPLPKDLVLGTLVR-LKQLKKWNVVSEVLEWLRIQSWWDFNEMDF 141
+ +A+++ + T+G + +LVR L + KWN + +L+ + + N + F
Sbjct: 244 IDAAISLFKEMETKGIK-SSVVTYNSLVRGLCKAGKWNDGALLLKDM-VSREIVPNVITF 301
Query: 142 LMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQS 201
+L+ + K+G +A ++ M +G +P+++++ LM+ Y R A + M
Sbjct: 302 NVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVR 361
Query: 202 SGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGG 261
+ P +T+ ++K + + + +VF + K L + + +++ + ++G
Sbjct: 362 NKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNI---SKRGLVANAVTYSILVQGFCQSGK 418
Query: 262 YEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYAL 318
+ A +LF M GV +TY L+ + ++ K I++ +Q++ + +V Y
Sbjct: 419 IKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTT 478
Query: 319 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 378
+I K + E+A +F + GV+P Y +++ G + +A + + M D
Sbjct: 479 IIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDG 538
Query: 379 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGF 414
+P+ C+Y T++ A++ D+ + K +K GF
Sbjct: 539 NAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGF 574
Score = 63.9 bits (154), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/232 (18%), Positives = 103/232 (44%)
Query: 300 IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFA 359
++ +M R+ P +V ++ +A + ++ L +++ G+ NI+++ F
Sbjct: 75 LFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFC 134
Query: 360 ISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVI 419
A +V + + PD ++ T++ + A R+ ++G P+V+
Sbjct: 135 RCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVV 194
Query: 420 TYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEM 479
TY +++ G + + +++ KM +K + ++TI+D+ ++ D+A+ +KEM
Sbjct: 195 TYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEM 254
Query: 480 ESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 531
E+ G N L+ A + N+ LL + P + ++ +D
Sbjct: 255 ETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLD 306
Score = 39.7 bits (91), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 22/99 (22%), Positives = 50/99 (50%), Gaps = 4/99 (4%)
Query: 137 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 196
N M + ++I+ K+G ++A +L M + G AP+ ++ L+ A+ R G + +
Sbjct: 507 NVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLI 566
Query: 197 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLL 235
M+S G A + ++++ + + E ++ F+ +L
Sbjct: 567 EEMKSCGFSADASSIKMVIDMLLSG----ELDKSFLDML 601
>sp|Q9LUR2|PP238_ARATH Putative pentatricopeptide repeat-containing protein At3g16710,
mitochondrial OS=Arabidopsis thaliana GN=At3g16710 PE=3
SV=1
Length = 507
Score = 149 bits (376), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 90/359 (25%), Positives = 174/359 (48%), Gaps = 9/359 (2%)
Query: 138 EMDFLMLITAYGKQGDFNKAEKVLSFMNK---KGYAPSVVSHTALMEAYGRGGRYKNAEA 194
E D + + +N+ E ++ ++ G+ P+VV++T L+ + +A
Sbjct: 150 EPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVE 209
Query: 195 IFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIY 254
+F +M ++G RP+ +TY ++ E ++ +A + L D K ++P+ F +I
Sbjct: 210 LFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWL---LRDMMKRRIEPNVITFTALID 266
Query: 255 MYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYK---EVSKIYDQMQRAGLQP 311
+ K G +A++L+ +M + V TY SL++ Y E +++ M+R G P
Sbjct: 267 AFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYP 326
Query: 312 DVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVF 371
+ V Y LI+ + K++R E+ + +F EM GV Y +L+ + + G D A+ VF
Sbjct: 327 NEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVF 386
Query: 372 KCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKV 431
M R PDI +Y +L +E A F +++ N++TY +I+G K+
Sbjct: 387 NQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKL 446
Query: 432 NNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKA 490
+E +++ + G+KPN +TT++ + + A +K+M+ GF P++
Sbjct: 447 GKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESV 505
Score = 145 bits (366), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 158/323 (48%), Gaps = 6/323 (1%)
Query: 137 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 196
N + + LI K N A ++ + M G P+VV++ AL+ GR+ +A +
Sbjct: 187 NVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLL 246
Query: 197 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 256
R M P+ +T+ ++ FV+ K EA+E++ ++ + + PD + +I
Sbjct: 247 RDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMI---QMSVYPDVFTYGSLINGL 303
Query: 257 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDV 313
G ++AR++F LM G + V Y +L+ K V KI+ +M + G+ +
Sbjct: 304 CMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANT 363
Query: 314 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 373
++Y +LI Y R + A VF +M P + YN+LLD +G V++A +F+
Sbjct: 364 ITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEY 423
Query: 374 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 433
MR+ +I +YT ++ +E A F L G PNVITY T+I G+ +
Sbjct: 424 MRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGL 483
Query: 434 LEKMMEIYDKMRVNGIKPNQTIF 456
+ + ++ KM+ +G PN++++
Sbjct: 484 IHEADSLFKKMKEDGFLPNESVY 506
Score = 122 bits (306), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 83/345 (24%), Positives = 159/345 (46%), Gaps = 6/345 (1%)
Query: 154 FNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQI 213
FN A + + M PS++ T L+ + RY ++F +MQ G P T I
Sbjct: 64 FNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNI 123
Query: 214 ILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMA 273
++ +++ A ++ K +PD F ++ Y E A LF +
Sbjct: 124 VMHCVCLSSQPCRASCFLGKMM---KLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQIL 180
Query: 274 ERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYALLINAYGKARREE 330
G + + VTY +L+ + ++ ++++QM G +P+VV+Y L+ + R
Sbjct: 181 GMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWG 240
Query: 331 EALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTML 390
+A + +M+ + P + L+DAF G + +A+ ++ M + PD+ +Y +++
Sbjct: 241 DAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLI 300
Query: 391 SAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIK 450
+ ++ A + F ++++G PN + Y TLI G+ K +E M+I+ +M G+
Sbjct: 301 NGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVV 360
Query: 451 PNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 495
N +T ++ Y D A + +M S PPD + N+LL
Sbjct: 361 ANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLL 405
Score = 120 bits (301), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 78/348 (22%), Positives = 161/348 (46%), Gaps = 8/348 (2%)
Query: 188 RYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE-EKSPLKPDQ 246
++ +A +F RM S P PS + + +L + + N++ +V ++L ++ + + P
Sbjct: 63 QFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRY----DVVISLFEQMQILGIPPLL 118
Query: 247 KMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQ 303
+++++ + +A M + G + VT+ SL++ ++ + ++DQ
Sbjct: 119 CTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQ 178
Query: 304 MQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGM 363
+ G +P+VV+Y LI K R A+ +F +M G RP YN L+ G
Sbjct: 179 ILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGR 238
Query: 364 VDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGT 423
A + + M + R P++ ++T ++ A+V + A++ + + Q P+V TYG+
Sbjct: 239 WGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGS 298
Query: 424 LIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCG 483
LI G L++ +++ M NG PN+ I+TT++ + K+K + + + EM G
Sbjct: 299 LINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKG 358
Query: 484 FPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 531
+ +L+ + A E+ + P I ++ +D
Sbjct: 359 VVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLD 406
Score = 43.5 bits (101), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Query: 124 VLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAY 183
+ E++R + D N + + ++I K G A + + KG P+V+++T ++ +
Sbjct: 420 IFEYMR-KREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGF 478
Query: 184 GRGGRYKNAEAIFRRMQSSGPRPSALTYQ 212
R G A+++F++M+ G P+ Y+
Sbjct: 479 CRRGLIHEADSLFKKMKEDGFLPNESVYK 507
Score = 39.3 bits (90), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 25/112 (22%), Positives = 49/112 (43%)
Query: 385 SYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKM 444
SY +L ++ A F R+ +P++I + L+ AK+N + ++ ++++M
Sbjct: 50 SYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQM 109
Query: 445 RVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 496
++ GI P +M + A + +M GF PD LL+
Sbjct: 110 QILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLN 161
>sp|Q9CAM8|PP100_ARATH Pentatricopeptide repeat-containing protein At1g63150
OS=Arabidopsis thaliana GN=At1g63150 PE=2 SV=1
Length = 629
Score = 149 bits (375), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 104/444 (23%), Positives = 210/444 (47%), Gaps = 40/444 (9%)
Query: 74 RRLMNQIEEVGSAVAVLRSERTRGQPLPKDLVLGTLVR-LKQLKKWNVVSEVLEWLRIQS 132
R ++ I +V AV L + + +P P + L+ + ++ K+ +V + E ++Q+
Sbjct: 55 RNRLSDIIKVDDAVD-LFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGE--QMQT 111
Query: 133 WWDFNEM-DFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKN 191
+++ + + I + ++ + A VL+ M K GY P +V+ ++L+ Y R +
Sbjct: 112 LGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISD 171
Query: 192 AEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVF-------------------- 231
A A+ +M G +P T+ ++ NK EA +
Sbjct: 172 AVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVN 231
Query: 232 -----------MTLLDE-EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQ 279
+ LL++ E + +K + +F+ +I K E A LF M +G++
Sbjct: 232 GLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRP 291
Query: 280 STVTYNSLMSFETNY---KEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVF 336
+ VTYNSL++ NY + S++ M + P+VV++ LI+A+ K + EA +
Sbjct: 292 NVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLH 351
Query: 337 EEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNA 396
EEM+ + P YN+L++ F + +D+A+ +FK M C P+I +Y T+++ +
Sbjct: 352 EEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKC 411
Query: 397 SDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIF 456
+E + FR + Q G V N +TY T+I+G+ + + + ++ +M N + + +
Sbjct: 412 KRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTY 471
Query: 457 TTIMDAYGKNKDFDSAVVWYKEME 480
+ ++ D+A+V +K ++
Sbjct: 472 SILLHGLCSYGKLDTALVIFKYLQ 495
Score = 127 bits (319), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/389 (22%), Positives = 175/389 (44%), Gaps = 38/389 (9%)
Query: 144 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 203
++ K+GD + A +L+ M +VV ++++ + + A +F M++ G
Sbjct: 229 VVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKG 288
Query: 204 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 263
RP+ +TY ++ ++ +A + +L+++ + P+ F+ +I + K G
Sbjct: 289 IRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKK---INPNVVTFNALIDAFFKEGKLV 345
Query: 264 KARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLI 320
+A KL M +R + T+TYN L+ E +++ M P++ +Y LI
Sbjct: 346 EAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLI 405
Query: 321 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 380
N + K +R E+ + +F EM G+ Y ++ F +G D A+ VFK M +R
Sbjct: 406 NGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVP 465
Query: 381 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQ---------------------------DG 413
DI +Y+ +L + ++ A F+ L++ D
Sbjct: 466 TDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDL 525
Query: 414 FV-----PNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKD 468
F P+V+TY T+I G L++ +++ KM+ +G PN + T++ A ++ D
Sbjct: 526 FCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCD 585
Query: 469 FDSAVVWYKEMESCGFPPDQKAKNILLSL 497
++ KEM S GF D +++ ++
Sbjct: 586 RAASAELIKEMRSSGFVGDASTISLVTNM 614
Score = 103 bits (257), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 125/270 (46%), Gaps = 3/270 (1%)
Query: 265 ARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLIN 321
A LF M + S V +N L+S ++ V + +QMQ G+ D+ +Y++ IN
Sbjct: 67 AVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFIN 126
Query: 322 AYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSP 381
+ + + ALAV +M+ G P + LL+ + S + A + M P
Sbjct: 127 CFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKP 186
Query: 382 DICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIY 441
D ++TT++ + A ++ Q G P+++TYGT++ G K +++ + +
Sbjct: 187 DTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLL 246
Query: 442 DKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTA 501
+KM IK N IF TI+D+ K + + AV + EME+ G P+ N L++
Sbjct: 247 NKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNY 306
Query: 502 DERNEANELLGNFNHPNNEPGINGLSISVD 531
++A+ LL N P + + +D
Sbjct: 307 GRWSDASRLLSNMLEKKINPNVVTFNALID 336
Score = 100 bits (250), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/325 (22%), Positives = 141/325 (43%), Gaps = 8/325 (2%)
Query: 191 NAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKS-PLKPDQKMF 249
+A +F M S P PS + + +L + NKF E+ ++L ++ ++ + D +
Sbjct: 66 DAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKF----ELVISLGEQMQTLGISHDLYTY 121
Query: 250 HMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQR 306
+ I + + A + A M + G + VT +SL++ + K +S + DQM
Sbjct: 122 SIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVE 181
Query: 307 AGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQ 366
G +PD ++ LI+ + EA+A+ ++M+ G +P Y +++ G +D
Sbjct: 182 MGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDL 241
Query: 367 ARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIK 426
A + M R ++ + T++ + +E A F ++ G PNV+TY +LI
Sbjct: 242 ALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLIN 301
Query: 427 GYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPP 486
+ M I PN F ++DA+ K A ++EM P
Sbjct: 302 CLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDP 361
Query: 487 DQKAKNILLSLAKTADERNEANELL 511
D N+L++ + +EA ++
Sbjct: 362 DTITYNLLINGFCMHNRLDEAKQMF 386
Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 78/170 (45%)
Query: 318 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 377
+L N + ++A+ +F +M+ + P+ +N LL A A + ++ + M+
Sbjct: 53 ILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTL 112
Query: 378 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 437
S D+ +Y+ ++ + S + A ++ + G+ P+++T +L+ GY +
Sbjct: 113 GISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDA 172
Query: 438 MEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 487
+ + D+M G KP+ FTT++ + AV +M G PD
Sbjct: 173 VALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPD 222
>sp|Q9LPX2|PPR39_ARATH Pentatricopeptide repeat-containing protein At1g12775,
mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2
SV=1
Length = 644
Score = 149 bits (375), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 101/414 (24%), Positives = 195/414 (47%), Gaps = 6/414 (1%)
Query: 101 PKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKV 160
P + L TLV L + VL +++ + NE+ + ++ K G A ++
Sbjct: 191 PTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMEL 250
Query: 161 LSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVE 220
L M ++ V ++ +++ + G NA +F M+ G + +TY ++ F
Sbjct: 251 LRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCN 310
Query: 221 ANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQS 280
A ++ + ++ L D K + P+ F ++I + K G +A +L M +RG+ +
Sbjct: 311 AGRWDDGAKL---LRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPN 367
Query: 281 TVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFE 337
T+TYNSL+ E +E ++ D M G PD++++ +LIN Y KA R ++ L +F
Sbjct: 368 TITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFR 427
Query: 338 EMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNAS 397
EM GV YN L+ F SG ++ A+ +F+ M R PDI SY +L +
Sbjct: 428 EMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNG 487
Query: 398 DMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFT 457
++E A + F ++++ ++ Y +I G + ++ +++ + + G+K + +
Sbjct: 488 ELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYN 547
Query: 458 TIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 511
++ + A + +++M G PD+ NIL+ D+ A EL+
Sbjct: 548 IMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELI 601
Score = 127 bits (319), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 94/436 (21%), Positives = 193/436 (44%), Gaps = 41/436 (9%)
Query: 141 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 200
F L+ + ++A +++ M + G+ P++++ L+ G+ +A + RM
Sbjct: 161 FNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMV 220
Query: 201 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 260
+G +P+ +TY +L + ++ + A E+ + E+ +K D + ++I K G
Sbjct: 221 ETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKM---EERNIKLDAVKYSIIIDGLCKDG 277
Query: 261 GYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYA 317
+ A LF M +G + +TYN+L+ N + + +K+ M + + P+VV+++
Sbjct: 278 SLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFS 337
Query: 318 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 377
+LI+++ K + EA + +EM+ G+ P YN L+D F +++A + M
Sbjct: 338 VLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISK 397
Query: 378 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLE-- 435
C PDI ++ +++ Y A+ ++ + FR + G + N +TY TL++G+ + LE
Sbjct: 398 GCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVA 457
Query: 436 ---------------------------------KMMEIYDKMRVNGIKPNQTIFTTIMDA 462
K +EI+ K+ + ++ + I+ I+
Sbjct: 458 KKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHG 517
Query: 463 YGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPG 522
D A + + G D +A NI++S D ++A+ L + P
Sbjct: 518 MCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPD 577
Query: 523 INGLSISVDEEDDDDD 538
+I + DDD
Sbjct: 578 ELTYNILIRAHLGDDD 593
Score = 122 bits (306), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 153/343 (44%), Gaps = 6/343 (1%)
Query: 171 PSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEV 230
P+V+ L A + +Y+ A+ ++M+S G S T I++ F K A
Sbjct: 86 PTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYA--- 142
Query: 231 FMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL--- 287
F T+ K +PD +F+ ++ +A +L M E G + + +T N+L
Sbjct: 143 FSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNG 202
Query: 288 MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPT 347
+ + + D+M G QP+ V+Y ++N K+ + A+ + +M + ++
Sbjct: 203 LCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLD 262
Query: 348 HKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFR 407
Y+I++D G +D A +F M DI +Y T++ + NA + K R
Sbjct: 263 AVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLR 322
Query: 408 RLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNK 467
+ + PNV+T+ LI + K L + ++ +M GI PN + +++D + K
Sbjct: 323 DMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKEN 382
Query: 468 DFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANEL 510
+ A+ M S G PD NIL++ A+ ++ EL
Sbjct: 383 RLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLEL 425
Score = 119 bits (298), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 82/369 (22%), Positives = 161/369 (43%), Gaps = 6/369 (1%)
Query: 130 IQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRY 189
IQS +DF L +A K + + M KG A S+ + + ++ + R +
Sbjct: 80 IQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKL 139
Query: 190 KNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMF 249
A + ++ G P + + +L + EA E+ +++ KP
Sbjct: 140 SYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGH---KPTLITL 196
Query: 250 HMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQR 306
+ ++ G A L M E G Q + VTY +++ + + ++ +M+
Sbjct: 197 NTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEE 256
Query: 307 AGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQ 366
++ D V Y+++I+ K + A +F EM G + YN L+ F +G D
Sbjct: 257 RNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDD 316
Query: 367 ARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIK 426
+ + M + + SP++ +++ ++ ++V + A++ + + Q G PN ITY +LI
Sbjct: 317 GAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLID 376
Query: 427 GYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPP 486
G+ K N LE+ +++ D M G P+ F +++ Y K D + ++EM G
Sbjct: 377 GFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIA 436
Query: 487 DQKAKNILL 495
+ N L+
Sbjct: 437 NTVTYNTLV 445
Score = 118 bits (295), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/385 (20%), Positives = 174/385 (45%), Gaps = 8/385 (2%)
Query: 143 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 202
++I + + + A + + K GY P V L+ R A + RM
Sbjct: 128 IMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEM 187
Query: 203 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEE-KSPLKPDQKMFHMMIYMYKKAGG 261
G +P+ +T ++ K +A + L+D ++ +P++ + ++ + K+G
Sbjct: 188 GHKPTLITLNTLVNGLCLNGKVSDA----VVLIDRMVETGFQPNEVTYGPVLNVMCKSGQ 243
Query: 262 YEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYAL 318
A +L M ER ++ V Y+ + + + + ++++M+ G + D+++Y
Sbjct: 244 TALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNT 303
Query: 319 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 378
LI + A R ++ + +M+ + P +++L+D+F G + +A + K M +
Sbjct: 304 LIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRG 363
Query: 379 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 438
+P+ +Y +++ + + +E A + + G P+++T+ LI GY K N ++ +
Sbjct: 364 IAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGL 423
Query: 439 EIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLA 498
E++ +M + G+ N + T++ + ++ + A ++EM S PD + ILL
Sbjct: 424 ELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGL 483
Query: 499 KTADERNEANELLGNFNHPNNEPGI 523
E +A E+ G E I
Sbjct: 484 CDNGELEKALEIFGKIEKSKMELDI 508
Score = 97.1 bits (240), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/349 (21%), Positives = 140/349 (40%), Gaps = 6/349 (1%)
Query: 186 GGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPD 245
G + +A +FR M S P P+ + + +LF K K+ E V E +
Sbjct: 66 GIKADDAVDLFRDMIQSRPLPTVIDFN---RLFSAIAKTKQYELVLALCKQMESKGIAHS 122
Query: 246 QKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYD 302
+MI + + A + + G + TV +N+L+ E E ++ D
Sbjct: 123 IYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVD 182
Query: 303 QMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISG 362
+M G +P +++ L+N + +A+ + + M++ G +P Y +L+ SG
Sbjct: 183 RMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSG 242
Query: 363 MVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYG 422
A + + M D Y+ ++ ++ A F ++ GF ++ITY
Sbjct: 243 QTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYN 302
Query: 423 TLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESC 482
TLI G+ + ++ M I PN F+ ++D++ K A KEM
Sbjct: 303 TLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQR 362
Query: 483 GFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 531
G P+ N L+ + EA +++ +P I +I ++
Sbjct: 363 GIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILIN 411
Score = 80.1 bits (196), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 124/256 (48%), Gaps = 9/256 (3%)
Query: 117 KWNVVSEVLEW--LRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVV 174
K N + E ++ L I D + M F +LI Y K + ++ M+ +G + V
Sbjct: 380 KENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTV 439
Query: 175 SHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTL 234
++ L++ + + G+ + A+ +F+ M S RP ++Y+I+L + + ++A E+F +
Sbjct: 440 TYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKI 499
Query: 235 LDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNY 294
EKS ++ D ++ ++I+ A + A LF + +GV+ YN ++S
Sbjct: 500 ---EKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRK 556
Query: 295 KEVSK---IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAY 351
+SK ++ +M G PD ++Y +LI A+ A + EEM +G
Sbjct: 557 DSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTV 616
Query: 352 NILLDAFAISGMVDQA 367
++++ + SG +D++
Sbjct: 617 KMVINMLS-SGELDKS 631
Score = 40.8 bits (94), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 32/147 (21%), Positives = 61/147 (41%)
Query: 385 SYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKM 444
SY LS+ + + A FR + Q +P VI + L AK E ++ + +M
Sbjct: 55 SYRDKLSSGLVGIKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQM 114
Query: 445 RVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADER 504
GI + + +++ + + + A ++ G+ PD N LL+
Sbjct: 115 ESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRV 174
Query: 505 NEANELLGNFNHPNNEPGINGLSISVD 531
+EA EL+ ++P + L+ V+
Sbjct: 175 SEALELVDRMVEMGHKPTLITLNTLVN 201
>sp|P0C7R3|PP106_ARATH Pentatricopeptide repeat-containing protein At1g64583,
mitochondrial OS=Arabidopsis thaliana GN=At1g64583 PE=2
SV=1
Length = 512
Score = 148 bits (374), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 108/446 (24%), Positives = 206/446 (46%), Gaps = 12/446 (2%)
Query: 139 MDFLMLITAYGKQGDFNKAEKVLSF---MNKKGYAPSVVSHTALMEAYGRGGRYKNAEAI 195
+DF L+TA + + E V+ F M G + + S T L+ + R R A ++
Sbjct: 72 VDFTRLLTA---TANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSV 128
Query: 196 FRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYM 255
+M G PS +T+ +L F N+ +A + + ++ KS +P+ +++ +I
Sbjct: 129 LGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMV---KSGYEPNVVVYNTLIDG 185
Query: 256 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS---FETNYKEVSKIYDQMQRAGLQPD 312
K G A +L M ++G+ VTYN+L++ + + + +++ M + + PD
Sbjct: 186 LCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPD 245
Query: 313 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 372
VV++ LI+ + K +EA +++EM+ + V P + YN +++ + G + A+ F
Sbjct: 246 VVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFD 305
Query: 373 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 432
M C P++ +Y T++S + ++ K F+R+ +GF ++ TY TLI GY +V
Sbjct: 306 LMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVG 365
Query: 433 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKN 492
L ++I+ M + P+ ++ N + +SA+V + +M A N
Sbjct: 366 KLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYN 425
Query: 493 ILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVDEEDDDDDDDEDDDDNIYHDGD 552
I++ AD+ +A EL +P +I + + E D+ +
Sbjct: 426 IMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEE 485
Query: 553 GDGDGDDNEDDAEETIACSGKEDELI 578
G + EDD E + S KE L+
Sbjct: 486 GIICQMNAEDDHLEEHSSSNKEISLV 511
Score = 133 bits (335), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 156/328 (47%), Gaps = 6/328 (1%)
Query: 125 LEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYG 184
L L ++S ++ N + + LI K G+ N A ++L+ M KKG VV++ L+
Sbjct: 163 LVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLC 222
Query: 185 RGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKP 244
GR+ +A + R M P +T+ ++ +FV+ EA+E++ ++ +S + P
Sbjct: 223 YSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMI---QSSVDP 279
Query: 245 DQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIY 301
+ ++ +I G A+K F LMA +G + VTYN+L+S ++ V K++
Sbjct: 280 NNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLF 339
Query: 302 DQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAIS 361
+M G D+ +Y LI+ Y + + AL +F M+ V P + ILL ++
Sbjct: 340 QRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVN 399
Query: 362 GMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITY 421
G ++ A F MR I +Y M+ A +E A + F RL +G P+ TY
Sbjct: 400 GEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTY 459
Query: 422 GTLIKGYAKVNNLEKMMEIYDKMRVNGI 449
+I G K + E+ +M+ GI
Sbjct: 460 TIMILGLCKNGPRREADELIRRMKEEGI 487
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 94/204 (46%)
Query: 328 REEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYT 387
R E+A A+F EM+ + P+ + LL A A + + M S D+ S+T
Sbjct: 51 RFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFT 110
Query: 388 TMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVN 447
++ + S + A ++ + G+ P+++T+G+L+ G+ VN + + M +
Sbjct: 111 ILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKS 170
Query: 448 GIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEA 507
G +PN ++ T++D KN + + A+ EME G D N LL+ + ++A
Sbjct: 171 GYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDA 230
Query: 508 NELLGNFNHPNNEPGINGLSISVD 531
+L + + P + + +D
Sbjct: 231 ARMLRDMMKRSINPDVVTFTALID 254
Score = 65.5 bits (158), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/242 (20%), Positives = 99/242 (40%), Gaps = 7/242 (2%)
Query: 294 YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNI 353
+++ ++ +M + P +V + L+ A RR E + ++M G+ ++ I
Sbjct: 52 FEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTI 111
Query: 354 LLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDG 413
L+ F + A +V M + P I ++ ++L + + + A + + G
Sbjct: 112 LIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSG 171
Query: 414 FVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAV 473
+ PNV+ Y TLI G K L +E+ ++M G+ + + T++ + + A
Sbjct: 172 YEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAA 231
Query: 474 VWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPG-------INGL 526
++M PD L+ + +EA EL + +P INGL
Sbjct: 232 RMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGL 291
Query: 527 SI 528
+
Sbjct: 292 CM 293
>sp|Q0WMY5|PP365_ARATH Pentatricopeptide repeat-containing protein At5g04810,
chloroplastic OS=Arabidopsis thaliana GN=PPR4 PE=1 SV=1
Length = 952
Score = 148 bits (373), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 100/387 (25%), Positives = 177/387 (45%), Gaps = 43/387 (11%)
Query: 140 DFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRM 199
+F +++ YG++GD ++A + M +G P+ +T+L+ AY G A + R+M
Sbjct: 311 EFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKM 370
Query: 200 QSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKP-DQKMFHMMIYMYKK 258
+ G S +TY +I+ F +A + A+ F DE K K + ++ +IY + +
Sbjct: 371 KEEGIEMSLVTYSVIVGGFSKAGHAEAADYWF----DEAKRIHKTLNASIYGKIIYAHCQ 426
Query: 259 AGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVS 315
E+A L M E G+ Y+++M T + K ++ +++ G P VV+
Sbjct: 427 TCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVT 486
Query: 316 YALLINAYGKARREEEAL-----------------------------------AVFEEML 340
Y LIN Y K + +AL AVFE+M+
Sbjct: 487 YGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMV 546
Query: 341 DAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDME 400
G++P YN ++ AF G +D+A K M++ R P ++ ++ Y + DM
Sbjct: 547 KEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMR 606
Query: 401 GAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIM 460
+ + F +++ G VP V T+ LI G + +EK +EI D+M + G+ N+ +T IM
Sbjct: 607 RSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIM 666
Query: 461 DAYGKNKDFDSAVVWYKEMESCGFPPD 487
Y D A ++ +++ G D
Sbjct: 667 QGYASVGDTGKAFEYFTRLQNEGLDVD 693
Score = 144 bits (363), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 104/387 (26%), Positives = 182/387 (47%), Gaps = 10/387 (2%)
Query: 101 PKDLVLGTLVRLKQLKKWNVVSEVLEWLRI--QSWWDFNEMDFLMLITAYGKQGDFNKAE 158
P + G L+ L K +S+ LE R+ + N + M+I + K D+ A
Sbjct: 482 PTVVTYGCLINL--YTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAF 539
Query: 159 KVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLF 218
V M K+G P V+ + ++ A+ G A + MQ RP+ T+ I+ +
Sbjct: 540 AVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGY 599
Query: 219 VEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQ 278
++ + + EVF + + P F+ +I + EKA ++ M GV
Sbjct: 600 AKSGDMRRSLEVFDMM---RRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVS 656
Query: 279 QSTVTYNSLMSFETNYKEVSKIYD---QMQRAGLQPDVVSYALLINAYGKARREEEALAV 335
+ TY +M + + K ++ ++Q GL D+ +Y L+ A K+ R + ALAV
Sbjct: 657 ANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAV 716
Query: 336 FEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVN 395
+EM + YNIL+D +A G V +A + + M+++ PDI +YT+ +SA
Sbjct: 717 TKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSK 776
Query: 396 ASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTI 455
A DM A + ++ G PN+ TY TLIKG+A+ + EK + Y++M+ GIKP++ +
Sbjct: 777 AGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAV 836
Query: 456 FTTIMDAYGKNKDFDSAVVWYKEMESC 482
+ ++ + A ++ M C
Sbjct: 837 YHCLLTSLLSRASIAEAYIYSGVMTIC 863
Score = 89.4 bits (220), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 101/218 (46%), Gaps = 4/218 (1%)
Query: 293 NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYN 352
N++ V ++++ + P + L++ YG+ A FE M G+ PT + Y
Sbjct: 293 NWQAVISAFEKISK----PSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYT 348
Query: 353 ILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQD 412
L+ A+A+ +D+A + + M+ + + +Y+ ++ + A E A+ +F K+
Sbjct: 349 SLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRI 408
Query: 413 GFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSA 472
N YG +I + + N+E+ + +M GI I+ T+MD Y D
Sbjct: 409 HKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKG 468
Query: 473 VVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANEL 510
+V +K ++ CGF P L++L + ++A E+
Sbjct: 469 LVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEV 506
>sp|Q0WKV3|PPR36_ARATH Pentatricopeptide repeat-containing protein At1g12300,
mitochondrial OS=Arabidopsis thaliana GN=At1g12300 PE=2
SV=1
Length = 637
Score = 148 bits (373), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 92/404 (22%), Positives = 198/404 (49%), Gaps = 6/404 (1%)
Query: 130 IQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRY 189
I+ ++ N + F LI +G ++A +++ M + G+ P +++ L+ G+
Sbjct: 150 IKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKE 209
Query: 190 KNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMF 249
A + +M G +P+A+TY +L + ++ + A E+ + E+ +K D +
Sbjct: 210 AEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKM---EERNIKLDAVKY 266
Query: 250 HMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQR 306
++I K G + A LF M +G+ + +TYN L+ N + + +K+ M +
Sbjct: 267 SIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIK 326
Query: 307 AGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQ 366
+ P+VV++++LI+++ K + EA + +EM+ G+ P Y L+D F +D+
Sbjct: 327 RKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDK 386
Query: 367 ARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIK 426
A + M C P+I ++ +++ Y A+ ++ + FR++ G V + +TY TLI+
Sbjct: 387 ANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQ 446
Query: 427 GYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPP 486
G+ ++ L E++ +M + PN + ++D N + + A+ ++++E
Sbjct: 447 GFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMEL 506
Query: 487 DQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISV 530
D NI++ A + ++A +L + +PG+ +I +
Sbjct: 507 DIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMI 550
Score = 133 bits (334), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 84/365 (23%), Positives = 169/365 (46%), Gaps = 6/365 (1%)
Query: 136 FNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAI 195
+ + + ++I K G + A + + M KG +++++ L+ + GR+ + +
Sbjct: 261 LDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKL 320
Query: 196 FRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYM 255
R M P+ +T+ +++ FV+ K +EAEE+ ++ + PD + +I
Sbjct: 321 LRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHR---GIAPDTITYTSLIDG 377
Query: 256 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPD 312
+ K +KA ++ LM +G + T+N L++ + +++ +M G+ D
Sbjct: 378 FCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVAD 437
Query: 313 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 372
V+Y LI + + + A +F+EM+ V P Y ILLD +G ++A +F+
Sbjct: 438 TVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFE 497
Query: 373 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 432
+ + + DI Y ++ NAS ++ A F L G P V TY +I G K
Sbjct: 498 KIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKG 557
Query: 433 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKN 492
L + ++ KM +G P+ + ++ A+ + D +V +E++ CGF D
Sbjct: 558 PLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIK 617
Query: 493 ILLSL 497
+++ +
Sbjct: 618 MVIDM 622
Score = 133 bits (334), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 83/355 (23%), Positives = 167/355 (47%), Gaps = 6/355 (1%)
Query: 144 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 203
++ K G A ++L M ++ V ++ +++ + G NA +F M+ G
Sbjct: 234 VLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKG 293
Query: 204 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 263
+ +TY I++ F A ++ + ++ L D K + P+ F ++I + K G
Sbjct: 294 ITTNIITYNILIGGFCNAGRWDDGAKL---LRDMIKRKINPNVVTFSVLIDSFVKEGKLR 350
Query: 264 KARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLI 320
+A +L M RG+ T+TY SL+ E + + +++ D M G P++ ++ +LI
Sbjct: 351 EAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILI 410
Query: 321 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 380
N Y KA R ++ L +F +M GV YN L+ F G ++ A+ +F+ M +
Sbjct: 411 NGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVP 470
Query: 381 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 440
P+I +Y +L + + E A + F ++++ ++ Y +I G + ++ ++
Sbjct: 471 PNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDL 530
Query: 441 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 495
+ + + G+KP + ++ K A + +++ME G PD NIL+
Sbjct: 531 FCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILI 585
Score = 124 bits (312), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 88/406 (21%), Positives = 179/406 (44%), Gaps = 6/406 (1%)
Query: 139 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 198
+DF L +A K ++ + M KG A ++ + + ++ + R + A + +
Sbjct: 89 IDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGK 148
Query: 199 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 258
+ G P+ +T+ ++ + EA E+ +++ KPD + ++
Sbjct: 149 IIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGH---KPDLITINTLVNGLCL 205
Query: 259 AGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVS 315
+G +A L M E G Q + VTY +++ + + ++ +M+ ++ D V
Sbjct: 206 SGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVK 265
Query: 316 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 375
Y+++I+ K + A +F EM G+ YNIL+ F +G D + + M
Sbjct: 266 YSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMI 325
Query: 376 RDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLE 435
+ + +P++ +++ ++ ++V + AE+ + + G P+ ITY +LI G+ K N+L+
Sbjct: 326 KRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLD 385
Query: 436 KMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 495
K ++ D M G PN F +++ Y K D + +++M G D N L+
Sbjct: 386 KANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLI 445
Query: 496 SLAKTADERNEANELLGNFNHPNNEPGINGLSISVDEEDDDDDDDE 541
+ N A EL P I I +D D+ + ++
Sbjct: 446 QGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEK 491
Score = 72.4 bits (176), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 109/235 (46%), Gaps = 6/235 (2%)
Query: 128 LRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGG 187
L + D N F +LI Y K + ++ M+ +G V++ L++ + G
Sbjct: 393 LMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELG 452
Query: 188 RYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQK 247
+ A+ +F+ M S P+ +TY+I+L + + ++A E+F + EKS ++ D
Sbjct: 453 KLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKI---EKSKMELDIG 509
Query: 248 MFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQM 304
+++++I+ A + A LF + +GV+ TYN + + + E ++ +M
Sbjct: 510 IYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKM 569
Query: 305 QRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFA 359
+ G PD +Y +LI A+ +++ + EE+ G +++D +
Sbjct: 570 EEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLS 624
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 89/204 (43%)
Query: 328 REEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYT 387
+ ++A+ +F +M+ + PT ++ L A A + D + K M + ++ + +
Sbjct: 68 KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLS 127
Query: 388 TMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVN 447
M++ + + A ++ + G+ PN IT+ TLI G + + +E+ D+M
Sbjct: 128 IMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEM 187
Query: 448 GIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEA 507
G KP+ T+++ + A++ +M G P+ +L++ + + A
Sbjct: 188 GHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALA 247
Query: 508 NELLGNFNHPNNEPGINGLSISVD 531
ELL N + SI +D
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIID 271
>sp|Q9LVQ5|PP432_ARATH Pentatricopeptide repeat-containing protein At5g55840
OS=Arabidopsis thaliana GN=At5g55840 PE=2 SV=2
Length = 1096
Score = 147 bits (372), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 97/396 (24%), Positives = 188/396 (47%), Gaps = 12/396 (3%)
Query: 105 VLGTLVRLKQ-LKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSF 163
+LG++V+ + + W+ + E+L+ FN +LI +G F K+ ++
Sbjct: 164 ILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFN-----ILINVLCAEGSFEKSSYLMQK 218
Query: 164 MNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANK 223
M K GYAP++V++ ++ Y + GR+K A + M+S G TY +++ +N+
Sbjct: 219 MEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNR 278
Query: 224 FKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVT 283
+ ++ L D K + P++ ++ +I + G A +L M G+ + VT
Sbjct: 279 IAKG---YLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVT 335
Query: 284 YNSLMS---FETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEML 340
+N+L+ E N+KE K++ M+ GL P VSY +L++ K + A + M
Sbjct: 336 FNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMK 395
Query: 341 DAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDME 400
GV Y ++D +G +D+A + M +D PDI +Y+ +++ + +
Sbjct: 396 RNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFK 455
Query: 401 GAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIM 460
A++ R+ + G PN I Y TLI ++ L++ + IY+ M + G + F ++
Sbjct: 456 TAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLV 515
Query: 461 DAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 496
+ K A + + M S G P+ + + L++
Sbjct: 516 TSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLIN 551
Score = 130 bits (327), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 87/396 (21%), Positives = 175/396 (44%), Gaps = 7/396 (1%)
Query: 137 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 196
+E+ + +L+ K +F+ A M + G +++T +++ + G A +
Sbjct: 367 SEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLL 426
Query: 197 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 256
M G P +TY ++ F + +FK A+E+ + + L P+ ++ +IY
Sbjct: 427 NEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIY---RVGLSPNGIIYSTLIYNC 483
Query: 257 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRA---GLQPDV 313
+ G ++A +++ M G + T+N L++ +V++ + M+ G+ P+
Sbjct: 484 CRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNT 543
Query: 314 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 373
VS+ LIN YG + +A +VF+EM G PT Y LL G + +A K
Sbjct: 544 VSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKS 603
Query: 374 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 433
+ + D Y T+L+A + ++ A F + Q +P+ TY +LI G +
Sbjct: 604 LHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGK 663
Query: 434 LEKMMEIYDKMRVNG-IKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKN 492
+ + G + PN+ ++T +D K + + + + ++M++ G PD N
Sbjct: 664 TVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTN 723
Query: 493 ILLSLAKTADERNEANELLGNFNHPNNEPGINGLSI 528
++ + + N+LL + N P + +I
Sbjct: 724 AMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNI 759
Score = 127 bits (318), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 91/367 (24%), Positives = 174/367 (47%), Gaps = 14/367 (3%)
Query: 137 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 196
NE+ + LI + +G A ++L+ M G +P+ V+ AL++ + G +K A +F
Sbjct: 297 NEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMF 356
Query: 197 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 256
M++ G PS ++Y ++L + +F A +M + +++ + + + MI
Sbjct: 357 YMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRM---KRNGVCVGRITYTGMIDGL 413
Query: 257 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMS-------FETNYKEVSKIYDQMQRAGL 309
K G ++A L M++ G+ VTY++L++ F+T + V +IY R GL
Sbjct: 414 CKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIY----RVGL 469
Query: 310 QPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQART 369
P+ + Y+ LI + +EA+ ++E M+ G H +N+L+ + +G V +A
Sbjct: 470 SPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEE 529
Query: 370 VFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYA 429
+CM D P+ S+ +++ Y N+ + A F + + G P TYG+L+KG
Sbjct: 530 FMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLC 589
Query: 430 KVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQK 489
K +L + + + + ++ T++ A K+ + AV + EM PD
Sbjct: 590 KGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSY 649
Query: 490 AKNILLS 496
L+S
Sbjct: 650 TYTSLIS 656
Score = 125 bits (315), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 150/320 (46%), Gaps = 8/320 (2%)
Query: 171 PSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEV 230
PSV + L+ Y R G +++ IFR M G PS T IL V++ E V
Sbjct: 123 PSV--YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSG---EDVSV 177
Query: 231 FMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF 290
+ L + K + PD F+++I + G +EK+ L M + G + VTYN+++ +
Sbjct: 178 WSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHW 237
Query: 291 ---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPT 347
+ +K ++ D M+ G+ DV +Y +LI+ ++ R + + +M + P
Sbjct: 238 YCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPN 297
Query: 348 HKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFR 407
YN L++ F+ G V A + M SP+ ++ ++ +++ + + A K F
Sbjct: 298 EVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFY 357
Query: 408 RLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNK 467
++ G P+ ++YG L+ G K + Y +M+ NG+ + +T ++D KN
Sbjct: 358 MMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNG 417
Query: 468 DFDSAVVWYKEMESCGFPPD 487
D AVV EM G PD
Sbjct: 418 FLDEAVVLLNEMSKDGIDPD 437
Score = 117 bits (292), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 87/389 (22%), Positives = 166/389 (42%), Gaps = 52/389 (13%)
Query: 144 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 203
+I K G ++A +L+ M+K G P +V+++AL+ + + GR+K A+ I R+ G
Sbjct: 409 MIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVG 468
Query: 204 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 263
P+ + Y ++ KEA ++ ++ E + D F++++ KAG
Sbjct: 469 LSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTR---DHFTFNVLVTSLCKAGKVA 525
Query: 264 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQP--------- 311
+A + M G+ +TV+++ L++ N E K ++D+M + G P
Sbjct: 526 EAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLL 585
Query: 312 --------------------------DVVSYALLINAYGKARREEEALAVFEEMLDAGVR 345
D V Y L+ A K+ +A+++F EM+ +
Sbjct: 586 KGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSIL 645
Query: 346 PTHKAYNILLDAFAISGMVDQARTVFKCM------RRDRCSPDICSYTTMLSAYVNASDM 399
P Y L ISG+ + +TV + R P+ YT + A
Sbjct: 646 PDSYTYTSL-----ISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQW 700
Query: 400 EGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTI 459
+ F ++ G P+++T +I GY+++ +EK ++ +M PN T + +
Sbjct: 701 KAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNIL 760
Query: 460 MDAYGKNKDFDSAVVWYKEMESCGFPPDQ 488
+ Y K KD ++ + Y+ + G PD+
Sbjct: 761 LHGYSKRKDVSTSFLLYRSIILNGILPDK 789
Score = 114 bits (286), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/351 (23%), Positives = 159/351 (45%), Gaps = 8/351 (2%)
Query: 137 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 196
N + F LI + +G+F +A K+ M KG PS VS+ L++ + + A +
Sbjct: 332 NHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFY 391
Query: 197 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE-EKSPLKPDQKMFHMMIYM 255
RM+ +G +TY ++ + EA + LL+E K + PD + +I
Sbjct: 392 MRMKRNGVCVGRITYTGMIDGLCKNGFLDEA----VVLLNEMSKDGIDPDIVTYSALING 447
Query: 256 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPD 312
+ K G ++ A+++ + G+ + + Y++L+ KE +IY+ M G D
Sbjct: 448 FCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRD 507
Query: 313 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 372
++ +L+ + KA + EA M G+ P +++ L++ + SG +A +VF
Sbjct: 508 HFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFD 567
Query: 373 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 432
M + P +Y ++L + AEKF + L + + Y TL+ K
Sbjct: 568 EMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSG 627
Query: 433 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCG 483
NL K + ++ +M I P+ +T+++ + A+++ KE E+ G
Sbjct: 628 NLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARG 678
Score = 96.7 bits (239), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 99/467 (21%), Positives = 175/467 (37%), Gaps = 89/467 (19%)
Query: 101 PKDLVLGTLV----RLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNK 156
P ++ TL+ R+ LK+ + E + I + F +L+T+ K G +
Sbjct: 471 PNGIIYSTLIYNCCRMGCLKEAIRIYEAM----ILEGHTRDHFTFNVLVTSLCKAGKVAE 526
Query: 157 AEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILK 216
AE+ + M G P+ VS L+ YG G A ++F M G P+ TY +LK
Sbjct: 527 AEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLK 586
Query: 217 LFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERG 276
+ +EAE+ +L P D M++ ++ K+G KA LF M +R
Sbjct: 587 GLCKGGHLREAEKFLKSL---HAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRS 643
Query: 277 VQQSTVTYNSLMS--------------------------------------FETN-YKEV 297
+ + TY SL+S F+ +K
Sbjct: 644 ILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAG 703
Query: 298 SKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDA 357
+QM G PD+V+ +I+ Y + + E+ + EM + P YNILL
Sbjct: 704 IYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLH- 762
Query: 358 FAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPN 417
Y D+ + +R + +G +P+
Sbjct: 763 ----------------------------------GYSKRKDVSTSFLLYRSIILNGILPD 788
Query: 418 VITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYK 477
+T +L+ G + N LE ++I G++ ++ F ++ N + + A K
Sbjct: 789 KLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVK 848
Query: 478 EMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGIN 524
M S G D+ + ++S+ E+ +L H ++ GI+
Sbjct: 849 VMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVL----HEMSKQGIS 891
Score = 91.7 bits (226), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/345 (20%), Positives = 149/345 (43%), Gaps = 7/345 (2%)
Query: 144 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 203
+I Y + G K +L M + P++ ++ L+ Y + + ++R + +G
Sbjct: 725 MIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNG 784
Query: 204 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 263
P LT ++ E+N + ++ + ++ D+ F+M+I G
Sbjct: 785 ILPDKLTCHSLVLGICESNMLEIGLKILKAFICR---GVEVDRYTFNMLISKCCANGEIN 841
Query: 264 KARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLI 320
A L +M G+ T ++++S ++E + +M + G+ P+ Y LI
Sbjct: 842 WAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLI 901
Query: 321 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 380
N + + A V EEM+ + P + A + ++ A A G D+A + + M + +
Sbjct: 902 NGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLV 961
Query: 381 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 440
P I S+TT++ ++ A + + G ++++Y LI G ++ E+
Sbjct: 962 PTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFEL 1021
Query: 441 YDKMRVNGIKPNQTIFTTIMDA-YGKNKDFDSAVVWYKEMESCGF 484
Y++M+ +G N T + ++ + F A + K++ + GF
Sbjct: 1022 YEEMKGDGFLANATTYKALIRGLLARETAFSGADIILKDLLARGF 1066
Score = 83.2 bits (204), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 70/335 (20%), Positives = 139/335 (41%), Gaps = 6/335 (1%)
Query: 164 MNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANK 223
M+ G+ P +V+ A+++ Y R G+ + + M + P+ TY I+L + +K
Sbjct: 710 MDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGY---SK 766
Query: 224 FKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVT 283
K+ F+ + + PD+ H ++ ++ E K+ RGV+ T
Sbjct: 767 RKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYT 826
Query: 284 YNSLMSFETNYKEVSKIYDQ---MQRAGLQPDVVSYALLINAYGKARREEEALAVFEEML 340
+N L+S E++ +D M G+ D + +++ + R +E+ V EM
Sbjct: 827 FNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMS 886
Query: 341 DAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDME 400
G+ P + Y L++ G + A V + M + P + + M+ A +
Sbjct: 887 KQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKAD 946
Query: 401 GAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIM 460
A R + + VP + ++ TL+ K N+ + +E+ M G+K + + ++
Sbjct: 947 EATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLI 1006
Query: 461 DAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 495
D A Y+EM+ GF + L+
Sbjct: 1007 TGLCAKGDMALAFELYEEMKGDGFLANATTYKALI 1041
Score = 71.6 bits (174), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 83/197 (42%)
Query: 299 KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAF 358
+I+ M G P V + ++ + K+ + + +EML + P +NIL++
Sbjct: 144 EIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVL 203
Query: 359 AISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNV 418
G +++ + + M + +P I +Y T+L Y + A + +K G +V
Sbjct: 204 CAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADV 263
Query: 419 ITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKE 478
TY LI + N + K + MR I PN+ + T+++ + A E
Sbjct: 264 CTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNE 323
Query: 479 MESCGFPPDQKAKNILL 495
M S G P+ N L+
Sbjct: 324 MLSFGLSPNHVTFNALI 340
Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/181 (18%), Positives = 80/181 (44%)
Query: 316 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 375
Y +LI Y + +++L +F M G P+ N +L + SG + K M
Sbjct: 126 YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEML 185
Query: 376 RDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLE 435
+ + PD+ ++ +++ E + +++++ G+ P ++TY T++ Y K +
Sbjct: 186 KRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFK 245
Query: 436 KMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 495
+E+ D M+ G+ + + ++ ++ + ++M P++ N L+
Sbjct: 246 AAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLI 305
Query: 496 S 496
+
Sbjct: 306 N 306
Score = 35.4 bits (80), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/133 (19%), Positives = 51/133 (38%)
Query: 379 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 438
C+ + Y ++ Y+ ++ + + FR + GF P+V T ++ K +
Sbjct: 119 CNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVW 178
Query: 439 EIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLA 498
+M I P+ F +++ F+ + ++ME G+ P N +L
Sbjct: 179 SFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWY 238
Query: 499 KTADERNEANELL 511
A ELL
Sbjct: 239 CKKGRFKAAIELL 251
>sp|Q3ECK2|PPR92_ARATH Pentatricopeptide repeat-containing protein At1g62680,
mitochondrial OS=Arabidopsis thaliana GN=At1g62680 PE=2
SV=2
Length = 548
Score = 147 bits (371), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 94/373 (25%), Positives = 176/373 (47%), Gaps = 33/373 (8%)
Query: 144 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 203
L+ + ++ + A ++ M + GY P +V++ A++++ + R +A F+ ++ G
Sbjct: 161 LVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKG 220
Query: 204 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 263
RP+ +TY ++ ++++ +A + L D K + P+ + ++ + K G
Sbjct: 221 IRPNVVTYTALVNGLCNSSRWSDAARL---LSDMIKKKITPNVITYSALLDAFVKNGKVL 277
Query: 264 KARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLI 320
+A++LF M + VTY+SL + E ++++D M G DVVSY LI
Sbjct: 278 EAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLI 337
Query: 321 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 380
N + KA+R E+ + +F EM G+ YN L+ F +G VD+A+ F M S
Sbjct: 338 NGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGIS 397
Query: 381 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 440
PDI +Y +L + ++E A F +++ +++TY T+I+G K +E+ +
Sbjct: 398 PDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSL 457
Query: 441 YDKMRVNGIKPNQTIFTTIMDA-------------YGKNK--------------DFDSAV 473
+ + + G+KP+ +TT+M Y K K D +
Sbjct: 458 FCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSDGDITLSA 517
Query: 474 VWYKEMESCGFPP 486
K+M SCG+ P
Sbjct: 518 ELIKKMLSCGYAP 530
Score = 139 bits (351), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 166/345 (48%), Gaps = 6/345 (1%)
Query: 154 FNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQI 213
N A + S M K PS+V L+ A + +Y ++ ++M+ G R T+ I
Sbjct: 66 LNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNI 125
Query: 214 ILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMA 273
++ F + A + +L K +PD+ ++ + + A L M
Sbjct: 126 VINCFCCCFQVSLALSILGKML---KLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMV 182
Query: 274 ERGVQQSTVTYNSLMSFETNYKEVSKIYD---QMQRAGLQPDVVSYALLINAYGKARREE 330
E G + V YN+++ K V+ +D +++R G++P+VV+Y L+N + R
Sbjct: 183 EIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWS 242
Query: 331 EALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTML 390
+A + +M+ + P Y+ LLDAF +G V +A+ +F+ M R PDI +Y++++
Sbjct: 243 DAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLI 302
Query: 391 SAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIK 450
+ ++ A + F + G + +V++Y TLI G+ K +E M+++ +M G+
Sbjct: 303 NGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLV 362
Query: 451 PNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 495
N + T++ + + D D A ++ +M+ G PD NILL
Sbjct: 363 SNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILL 407
Score = 132 bits (332), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 98/429 (22%), Positives = 203/429 (47%), Gaps = 16/429 (3%)
Query: 90 LRSERTRGQPLPKDLVLGTLVR-LKQLKKWNVVSEV---LEWLRIQS-WWDFNEMDFLML 144
L S+ + +P P + L+ + +LKK++VV + +E L I++ + FN ++
Sbjct: 72 LFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN-----IV 126
Query: 145 ITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGP 204
I + + A +L M K GY P V+ +L+ + R R +A ++ +M G
Sbjct: 127 INCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGY 186
Query: 205 RPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEK 264
+P + Y I+ + + +A + F + E+ ++P+ + ++ + +
Sbjct: 187 KPDIVAYNAIIDSLCKTKRVNDAFDFFKEI---ERKGIRPNVVTYTALVNGLCNSSRWSD 243
Query: 265 ARKLFALMAERGVQQSTVTYNSLM-SFETNYK--EVSKIYDQMQRAGLQPDVVSYALLIN 321
A +L + M ++ + + +TY++L+ +F N K E +++++M R + PD+V+Y+ LIN
Sbjct: 244 AARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLIN 303
Query: 322 AYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSP 381
R +EA +F+ M+ G +YN L++ F + V+ +F+ M +
Sbjct: 304 GLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVS 363
Query: 382 DICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIY 441
+ +Y T++ + A D++ A++FF ++ G P++ TY L+ G LEK + I+
Sbjct: 364 NTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIF 423
Query: 442 DKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTA 501
+ M+ + + +TT++ K + A + + G PD ++S T
Sbjct: 424 EDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTK 483
Query: 502 DERNEANEL 510
+E L
Sbjct: 484 GLLHEVEAL 492
Score = 104 bits (259), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/343 (22%), Positives = 156/343 (45%), Gaps = 8/343 (2%)
Query: 185 RGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE-EKSPLK 243
R + +A +F M S P PS + + +L V+ K+ +V ++L + E ++
Sbjct: 62 RDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKY----DVVISLGKKMEVLGIR 117
Query: 244 PDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KI 300
D F+++I + A + M + G + VT SL++ VS +
Sbjct: 118 NDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSL 177
Query: 301 YDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAI 360
D+M G +PD+V+Y +I++ K +R +A F+E+ G+RP Y L++
Sbjct: 178 VDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCN 237
Query: 361 SGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVIT 420
S A + M + + +P++ +Y+ +L A+V + A++ F + + P+++T
Sbjct: 238 SSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVT 297
Query: 421 YGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEME 480
Y +LI G + +++ +++D M G + + T+++ + K K + + ++EM
Sbjct: 298 YSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMS 357
Query: 481 SCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGI 523
G + N L+ A + ++A E + P I
Sbjct: 358 QRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDI 400
Score = 60.1 bits (144), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 91/201 (45%)
Query: 331 EALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTML 390
+A+ +F +M+ + P+ +N LL A D ++ K M D+ ++ ++
Sbjct: 68 DAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVI 127
Query: 391 SAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIK 450
+ + + A ++ + G+ P+ +T G+L+ G+ + N + + + DKM G K
Sbjct: 128 NCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYK 187
Query: 451 PNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANEL 510
P+ + I+D+ K K + A ++KE+E G P+ L++ + ++A L
Sbjct: 188 PDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARL 247
Query: 511 LGNFNHPNNEPGINGLSISVD 531
L + P + S +D
Sbjct: 248 LSDMIKKKITPNVITYSALLD 268
>sp|Q9ASZ8|PPR37_ARATH Pentatricopeptide repeat-containing protein At1g12620
OS=Arabidopsis thaliana GN=At1g12620 PE=2 SV=1
Length = 621
Score = 147 bits (371), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 110/511 (21%), Positives = 238/511 (46%), Gaps = 43/511 (8%)
Query: 60 VFKDAADEAGKKNWR-RLMNQIEEVGSAVAV-LRSERTRGQPLPKDLVLGTLVRL-KQLK 116
VF +D GK ++R RL + I ++ AV L E TR +P P+ + L + + K
Sbjct: 27 VFSSVSDGKGKVSYRERLRSGIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTK 86
Query: 117 KWNVVSEVLEWLR----------------------------------IQSWWDFNEMDFL 142
++++V ++ + + I+ ++ + + F
Sbjct: 87 QYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFS 146
Query: 143 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 202
LI +G ++A +++ M + G+ P++++ AL+ G+ +A + RM +
Sbjct: 147 TLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVET 206
Query: 203 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 262
G +P+ +TY +LK+ ++ + A E+ + E+ +K D + ++I K G
Sbjct: 207 GFQPNEVTYGPVLKVMCKSGQTALAMELLRKM---EERKIKLDAVKYSIIIDGLCKDGSL 263
Query: 263 EKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALL 319
+ A LF M +G + + Y +L+ + + + +K+ M + + PDVV+++ L
Sbjct: 264 DNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSAL 323
Query: 320 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 379
I+ + K + EA + +EM+ G+ P Y L+D F +D+A + M C
Sbjct: 324 IDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGC 383
Query: 380 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 439
P+I ++ +++ Y A+ ++ + FR++ G V + +TY TLI+G+ ++ LE E
Sbjct: 384 GPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKE 443
Query: 440 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAK 499
++ +M ++P+ + ++D N + + A+ ++++E D NI++
Sbjct: 444 LFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMC 503
Query: 500 TADERNEANELLGNFNHPNNEPGINGLSISV 530
A + ++A +L + +P + +I +
Sbjct: 504 NASKVDDAWDLFCSLPLKGVKPDVKTYNIMI 534
Score = 137 bits (344), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 92/381 (24%), Positives = 175/381 (45%), Gaps = 8/381 (2%)
Query: 112 LKQLKKWNVVSEVLEWLRI--QSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGY 169
LK + K + +E LR + + + + ++I K G + A + + M KG+
Sbjct: 219 LKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGF 278
Query: 170 APSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEE 229
++ +T L+ + GR+ + + R M P + + ++ FV+ K +EAEE
Sbjct: 279 KADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEE 338
Query: 230 VFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS 289
+ ++ + + PD + +I + K +KA + LM +G + T+N L++
Sbjct: 339 LHKEMI---QRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILIN 395
Query: 290 FETNYKEVS---KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRP 346
+ +++ +M G+ D V+Y LI + + + E A +F+EM+ VRP
Sbjct: 396 GYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRP 455
Query: 347 THKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFF 406
+Y ILLD +G ++A +F+ + + + DI Y ++ NAS ++ A F
Sbjct: 456 DIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLF 515
Query: 407 RRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKN 466
L G P+V TY +I G K +L + ++ KM +G PN + ++ A+
Sbjct: 516 CSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGE 575
Query: 467 KDFDSAVVWYKEMESCGFPPD 487
D + +E++ CGF D
Sbjct: 576 GDATKSAKLIEEIKRCGFSVD 596
>sp|Q0WKZ3|PP105_ARATH Pentatricopeptide repeat-containing protein At1g64580
OS=Arabidopsis thaliana GN=At1g64580 PE=2 SV=1
Length = 523
Score = 147 bits (370), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 96/387 (24%), Positives = 183/387 (47%), Gaps = 8/387 (2%)
Query: 139 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 198
+DF ++T K F+ + M G + + S T L+ + R R A A+ +
Sbjct: 80 VDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGK 139
Query: 199 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE-EKSPLKPDQKMFHMMIYMYK 257
M G RPS +T +L F + N+F+EA ++L+D + P+ +++ +I
Sbjct: 140 MMKLGFRPSIVTLGSLLNGFCQGNRFQEA----VSLVDSMDGFGFVPNVVIYNTVINGLC 195
Query: 258 KAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVV 314
K A ++F M ++G++ VTYN+L+S +N + + +++ M + + P+V+
Sbjct: 196 KNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVI 255
Query: 315 SYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCM 374
+ LI+ + K EA +++EM+ V P YN L++ F I G + A+ +F M
Sbjct: 256 FFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLM 315
Query: 375 RRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNL 434
C PD+ +Y T+++ + + +E K F + G V + TY TLI GY + L
Sbjct: 316 VSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKL 375
Query: 435 EKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNIL 494
+++++M G+ P+ + ++D N + A+V ++++ D NI+
Sbjct: 376 NVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNII 435
Query: 495 LSLAKTADERNEANELLGNFNHPNNEP 521
+ D+ EA L + +P
Sbjct: 436 IQGLCRTDKLKEAWCLFRSLTRKGVKP 462
Score = 130 bits (328), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 93/369 (25%), Positives = 168/369 (45%), Gaps = 11/369 (2%)
Query: 101 PKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDF--NEMDFLMLITAYGKQGDFNKAE 158
P + LG+L L + N E + + + F N + + +I K D N A
Sbjct: 147 PSIVTLGSL--LNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNAL 204
Query: 159 KVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLF 218
+V M KKG V++ L+ GR+ +A + R M P+ + + ++ F
Sbjct: 205 EVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTF 264
Query: 219 VEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQ 278
V+ EA ++ ++ + + P+ ++ +I + G A+ +F LM +G
Sbjct: 265 VKEGNLLEARNLYKEMI---RRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCF 321
Query: 279 QSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAV 335
VTYN+L++ K V K++ +M GL D +Y LI+ Y +A + A V
Sbjct: 322 PDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKV 381
Query: 336 FEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVN 395
F M+D GV P YNILLD +G +++A + + +++ DI +Y ++
Sbjct: 382 FNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCR 441
Query: 396 ASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTI 455
++ A FR L + G P+ I Y T+I G + + ++ +M+ +G P++ I
Sbjct: 442 TDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERI 501
Query: 456 F-TTIMDAY 463
+ T+ D Y
Sbjct: 502 YDETLRDHY 510
Score = 119 bits (299), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 94/427 (22%), Positives = 195/427 (45%), Gaps = 12/427 (2%)
Query: 90 LRSERTRGQPLPKDL-VLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEM-DFLMLITA 147
L E + +P+P + L + ++ K+++V + + ++++ +++ F +LI
Sbjct: 66 LFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIV--IYLYHKMENLGISHDLYSFTILIHC 123
Query: 148 YGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPS 207
+ + + A +L M K G+ PS+V+ +L+ + +G R++ A ++ M G P+
Sbjct: 124 FCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPN 183
Query: 208 ALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARK 267
+ Y ++ + A EVF + EK ++ D ++ +I +G + A +
Sbjct: 184 VVIYNTVINGLCKNRDLNNALEVFYCM---EKKGIRADAVTYNTLISGLSNSGRWTDAAR 240
Query: 268 LFALMAERGVQQSTVTYNSLM-SF--ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYG 324
L M +R + + + + +L+ +F E N E +Y +M R + P+V +Y LIN +
Sbjct: 241 LLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFC 300
Query: 325 KARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDIC 384
+A +F+ M+ G P YN L+ F S V+ +F M D
Sbjct: 301 IHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAF 360
Query: 385 SYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKM 444
+Y T++ Y A + A+K F R+ G P+++TY L+ +EK + + + +
Sbjct: 361 TYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDL 420
Query: 445 RVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS-LAKTADE 503
+ + + + + I+ + A ++ + G PD A ++S L + +
Sbjct: 421 QKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQ 480
Query: 504 RNEANEL 510
R EA++L
Sbjct: 481 R-EADKL 486
Score = 112 bits (281), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 84/347 (24%), Positives = 150/347 (43%), Gaps = 6/347 (1%)
Query: 188 RYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQK 247
++ +A ++F M S P PS + + +L + + NKF ++ + E + D
Sbjct: 59 KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKM---ENLGISHDLY 115
Query: 248 MFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQM 304
F ++I+ + + A L M + G + S VT SL++ ++E + D M
Sbjct: 116 SFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSM 175
Query: 305 QRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMV 364
G P+VV Y +IN K R AL VF M G+R YN L+ + SG
Sbjct: 176 DGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRW 235
Query: 365 DQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTL 424
A + + M + + P++ +T ++ +V ++ A ++ + + VPNV TY +L
Sbjct: 236 TDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSL 295
Query: 425 IKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGF 484
I G+ L ++D M G P+ + T++ + K+K + + + EM G
Sbjct: 296 INGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGL 355
Query: 485 PPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 531
D N L+ A + N A ++ P I +I +D
Sbjct: 356 VGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLD 402
>sp|Q9C6S6|PPR67_ARATH Putative pentatricopeptide repeat-containing protein At1g31840
OS=Arabidopsis thaliana GN=At1g31840 PE=2 SV=2
Length = 840
Score = 147 bits (370), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 103/408 (25%), Positives = 175/408 (42%), Gaps = 8/408 (1%)
Query: 145 ITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGP 204
I Y K GD A V M +G +P+VV++T L++ + GR A ++ ++ G
Sbjct: 363 IDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGM 422
Query: 205 RPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEK 264
PS +TY ++ F + + F D K PD ++ +++ K G
Sbjct: 423 EPSIVTYSSLIDGFCKCGNLRSG---FALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLH 479
Query: 265 ARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLIN 321
A + M + ++ + V +NSL+ + E K++ M G++PDV ++ ++
Sbjct: 480 AMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMR 539
Query: 322 AYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSP 381
R EEAL +F M G+ P AY L+DAF +F M+R++ S
Sbjct: 540 VSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISA 599
Query: 382 DICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIY 441
DI ++ +E A KFF L + P+++TY T+I GY + L++ I+
Sbjct: 600 DIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIF 659
Query: 442 DKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTA 501
+ ++V PN T ++ KN D D A+ + M G P+ L+ +
Sbjct: 660 ELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKS 719
Query: 502 DERNEANELLGNFNHPNNEPGINGLSISVDEEDDDDDDDEDDDDNIYH 549
+ + +L P I SI +D DE NI+H
Sbjct: 720 VDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDE--ATNIFH 765
Score = 125 bits (313), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/355 (23%), Positives = 165/355 (46%), Gaps = 6/355 (1%)
Query: 144 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 203
LI + K G+ + M K GY P VV + L++ + G +A +M
Sbjct: 432 LIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQS 491
Query: 204 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 263
R + + + ++ + N+F EA +VF + +KPD F ++ + G E
Sbjct: 492 IRLNVVVFNSLIDGWCRLNRFDEALKVFRLM---GIYGIKPDVATFTTVMRVSIMEGRLE 548
Query: 264 KARKLFALMAERGVQQSTVTYNSLM-SFETNYKEVS--KIYDQMQRAGLQPDVVSYALLI 320
+A LF M + G++ + Y +L+ +F + K +++D MQR + D+ ++I
Sbjct: 549 EALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVI 608
Query: 321 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 380
+ K R E+A F +++ + P YN ++ + +D+A +F+ ++
Sbjct: 609 HLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFG 668
Query: 381 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 440
P+ + T ++ +DM+GA + F + + G PN +TYG L+ ++K ++E ++
Sbjct: 669 PNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKL 728
Query: 441 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 495
+++M+ GI P+ ++ I+D K D A + + PD A IL+
Sbjct: 729 FEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILI 783
Score = 122 bits (306), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 79/348 (22%), Positives = 160/348 (45%), Gaps = 7/348 (2%)
Query: 151 QGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALT 210
+G+ KA + ++G+ +VS +++ + + A + + GP P+ +T
Sbjct: 230 KGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVD-QIEVASRLLSLVLDCGPAPNVVT 288
Query: 211 YQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFA 270
+ ++ F + + A ++F + E+ ++PD + +I Y KAG KLF+
Sbjct: 289 FCTLINGFCKRGEMDRAFDLFKVM---EQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFS 345
Query: 271 LMAERGVQQSTVTYNSLMSFET---NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKAR 327
+GV+ V ++S + + S +Y +M G+ P+VV+Y +LI +
Sbjct: 346 QALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDG 405
Query: 328 REEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYT 387
R EA ++ ++L G+ P+ Y+ L+D F G + +++ M + PD+ Y
Sbjct: 406 RIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYG 465
Query: 388 TMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVN 447
++ M A +F ++ NV+ + +LI G+ ++N ++ ++++ M +
Sbjct: 466 VLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIY 525
Query: 448 GIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 495
GIKP+ FTT+M + A+ + M G PD A L+
Sbjct: 526 GIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLI 573
Score = 121 bits (303), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/370 (21%), Positives = 167/370 (45%), Gaps = 6/370 (1%)
Query: 157 AEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILK 216
A ++LS + G AP+VV+ L+ + + G A +F+ M+ G P + Y ++
Sbjct: 270 ASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLID 329
Query: 217 LFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERG 276
+ +A ++F L + +K D +F I +Y K+G A ++ M +G
Sbjct: 330 GYFKAGMLGMGHKLFSQALHKG---VKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQG 386
Query: 277 VQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEAL 333
+ + VTY L + + E +Y Q+ + G++P +V+Y+ LI+ + K
Sbjct: 387 ISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGF 446
Query: 334 AVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAY 393
A++E+M+ G P Y +L+D + G++ A M ++ + +++ +
Sbjct: 447 ALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGW 506
Query: 394 VNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQ 453
+ + A K FR + G P+V T+ T+++ LE+ + ++ +M G++P+
Sbjct: 507 CRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDA 566
Query: 454 TIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGN 513
+ T++DA+ K+ + + M+ D N+++ L +A++ N
Sbjct: 567 LAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNN 626
Query: 514 FNHPNNEPGI 523
EP I
Sbjct: 627 LIEGKMEPDI 636
Score = 113 bits (282), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 78/348 (22%), Positives = 153/348 (43%), Gaps = 6/348 (1%)
Query: 143 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 202
+L+ KQG A + M + +VV +L++ + R R+ A +FR M
Sbjct: 466 VLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIY 525
Query: 203 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 262
G +P T+ ++++ + + +EA +F + K L+PD + +I + K
Sbjct: 526 GIKPDVATFTTVMRVSIMEGRLEEALFLFFRMF---KMGLEPDALAYCTLIDAFCKHMKP 582
Query: 263 EKARKLFALMAERGVQQSTVTYNSLMS--FETNYKE-VSKIYDQMQRAGLQPDVVSYALL 319
+LF LM + N ++ F+ + E SK ++ + ++PD+V+Y +
Sbjct: 583 TIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTM 642
Query: 320 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 379
I Y RR +EA +FE + P IL+ + +D A +F M
Sbjct: 643 ICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGS 702
Query: 380 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 439
P+ +Y ++ + + D+EG+ K F +++ G P++++Y +I G K +++
Sbjct: 703 KPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATN 762
Query: 440 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 487
I+ + + P+ + ++ Y K A + Y+ M G PD
Sbjct: 763 IFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPD 810
Score = 67.0 bits (162), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 78/165 (47%), Gaps = 4/165 (2%)
Query: 114 QLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSV 173
L++ + + E L++ + N + +LI K D + A ++ S M +KG P+
Sbjct: 648 SLRRLDEAERIFELLKVTPFGP-NTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNA 706
Query: 174 VSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMT 233
V++ LM+ + + + + +F MQ G PS ++Y II+ + + EA +F
Sbjct: 707 VTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQ 766
Query: 234 LLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQ 278
+D + L PD + ++I Y K G +A L+ M GV+
Sbjct: 767 AIDAK---LLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVK 808
>sp|Q9LW84|PP236_ARATH Pentatricopeptide repeat-containing protein At3g16010
OS=Arabidopsis thaliana GN=At3g16010 PE=2 SV=1
Length = 642
Score = 147 bits (370), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 105/401 (26%), Positives = 186/401 (46%), Gaps = 43/401 (10%)
Query: 170 APSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEE 229
+P+V+S L++A GR A ++F + + +P++ TY ++ + ++ + ++ E
Sbjct: 161 SPAVLSE--LVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHE 218
Query: 230 VFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS 289
V+ + +E PD + +I Y+K G + A +LF M + +Q + Y +L+
Sbjct: 219 VYTEMCNE--GDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLG 276
Query: 290 FETNYKEVSK---IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRP 346
+V K ++++M+RAG P V +Y LI GKA R +EA +++ML G+ P
Sbjct: 277 IYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTP 336
Query: 347 THKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSA-YVNASDMEGAEKF 405
N L++ G V++ VF M RC+P + SY T++ A + + + + +
Sbjct: 337 DVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSW 396
Query: 406 FRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGK 465
F ++K D P+ TY LI GY K N +EK + + ++M G P + ++++A GK
Sbjct: 397 FDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGK 456
Query: 466 NKDFDS-----------------------------------AVVWYKEMESCGFPPDQKA 490
K +++ AV + EM++ G PD A
Sbjct: 457 AKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYA 516
Query: 491 KNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 531
N L+S A NEAN LL IN +I ++
Sbjct: 517 YNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILN 557
Score = 130 bits (327), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 92/399 (23%), Positives = 181/399 (45%), Gaps = 42/399 (10%)
Query: 144 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 203
LI++Y K G + A ++ M P+ +T L+ Y + G+ + A +F M+ +G
Sbjct: 239 LISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAG 298
Query: 204 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 263
P+ TY ++K +A + EA + +L + L PD + ++ + K G E
Sbjct: 299 CSPTVYTYTELIKGLGKAGRVDEAYGFYKDML---RDGLTPDVVFLNNLMNILGKVGRVE 355
Query: 264 KARKLFALMAERGVQQSTVTYNSLMS--FET--NYKEVSKIYDQMQRAGLQPDVVSYALL 319
+ +F+ M + V+YN+++ FE+ + EVS +D+M+ + P +Y++L
Sbjct: 356 ELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSIL 415
Query: 320 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDA---------------------- 357
I+ Y K R E+AL + EEM + G P AY L++A
Sbjct: 416 IDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFG 475
Query: 358 -------------FAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEK 404
F G + +A +F M+ PD+ +Y ++S V A + A
Sbjct: 476 NVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANS 535
Query: 405 FFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYG 464
R+++++G ++ ++ ++ G+A+ + +E+++ ++ +GIKP+ + T++ +
Sbjct: 536 LLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFA 595
Query: 465 KNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADE 503
F+ A +EM+ GF D + +L D
Sbjct: 596 HAGMFEEAARMMREMKDKGFEYDAITYSSILDAVGNVDH 634
Score = 122 bits (306), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 82/342 (23%), Positives = 156/342 (45%), Gaps = 42/342 (12%)
Query: 210 TYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLF 269
TY +++ EA + E ++ + P + ++ +A KA +F
Sbjct: 128 TYMTLIRCLEEARLYGEMYRTIQEVVRNTYVSVSP--AVLSELVKALGRAKMVSKALSVF 185
Query: 270 ALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAG-LQPDVVSYALLINAYGK 325
R + ++ TYNS++ E +++V ++Y +M G PD ++Y+ LI++Y K
Sbjct: 186 YQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEK 245
Query: 326 ARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICS 385
R + A+ +F+EM D ++PT K Y LL + G V++A +F+ M+R CSP + +
Sbjct: 246 LGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYT 305
Query: 386 YTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI----- 440
YT ++ A ++ A F++ + +DG P+V+ L+ KV +E++ +
Sbjct: 306 YTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMG 365
Query: 441 -------------------------------YDKMRVNGIKPNQTIFTTIMDAYGKNKDF 469
+DKM+ + + P++ ++ ++D Y K
Sbjct: 366 MWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRV 425
Query: 470 DSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 511
+ A++ +EM+ GFPP A L++ A ANEL
Sbjct: 426 EKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELF 467
Score = 89.0 bits (219), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 126/275 (45%), Gaps = 43/275 (15%)
Query: 130 IQSWWDF--------NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALME 181
+ SW+D +E + +LI Y K KA +L M++KG+ P ++ +L+
Sbjct: 393 VSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIN 452
Query: 182 AYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP 241
A G+ RY+ A +F+ ++ + S+ Y +++K F + K EA ++F + ++
Sbjct: 453 ALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSG- 511
Query: 242 LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIY 301
PD ++ ++ KAG +A NSL+
Sbjct: 512 --PDVYAYNALMSGMVKAGMINEA-------------------NSLLR------------ 538
Query: 302 DQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAIS 361
+M+ G + D+ S+ +++N + + A+ +FE + +G++P YN LL FA +
Sbjct: 539 -KMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHA 597
Query: 362 GMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNA 396
GM ++A + + M+ D +Y+++L A N
Sbjct: 598 GMFEEAARMMREMKDKGFEYDAITYSSILDAVGNV 632
Score = 86.3 bits (212), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 108/235 (45%), Gaps = 19/235 (8%)
Query: 275 RGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRA----------GLQPDVVSYALLINAYG 324
R Q TY +L+ E +++Y +M R + P V+S L+ A G
Sbjct: 120 RNFQHDCSTYMTLI----RCLEEARLYGEMYRTIQEVVRNTYVSVSPAVLSE--LVKALG 173
Query: 325 KARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK--CMRRDRCSPD 382
+A+ +AL+VF + +PT YN ++ G ++ V+ C D C PD
Sbjct: 174 RAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGD-CFPD 232
Query: 383 ICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYD 442
+Y+ ++S+Y + A + F +K + P Y TL+ Y KV +EK +++++
Sbjct: 233 TITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFE 292
Query: 443 KMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSL 497
+M+ G P +T ++ GK D A +YK+M G PD N L+++
Sbjct: 293 EMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNI 347
>sp|O04491|PPR26_ARATH Putative pentatricopeptide repeat-containing protein At1g09680
OS=Arabidopsis thaliana GN=At1g09680 PE=3 SV=1
Length = 607
Score = 146 bits (368), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 93/355 (26%), Positives = 169/355 (47%), Gaps = 13/355 (3%)
Query: 118 WNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHT 177
W E+L+ + + N F +L+ + K+G+ + A+KV + K+ P+VVS
Sbjct: 225 WGFYMEILD-----AGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFN 279
Query: 178 ALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE 237
L+ Y + G + +M+ S RP TY ++ + NK A +F DE
Sbjct: 280 TLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLF----DE 335
Query: 238 E-KSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS-FETNYK 295
K L P+ +F +I+ + + G + ++ + M +G+Q V YN+L++ F N
Sbjct: 336 MCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGD 395
Query: 296 EVS--KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNI 353
V+ I D M R GL+PD ++Y LI+ + + E AL + +EM G+ ++
Sbjct: 396 LVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSA 455
Query: 354 LLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDG 413
L+ G V A + M R PD +YT M+ A+ D + K + ++ DG
Sbjct: 456 LVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDG 515
Query: 414 FVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKD 468
VP+V+TY L+ G K+ ++ + D M G+ P+ + T+++ + ++ +
Sbjct: 516 HVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGHHRHAN 570
Score = 115 bits (289), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 138/297 (46%), Gaps = 39/297 (13%)
Query: 248 MFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFET---NYKEVSKIYDQM 304
+F++++ + K G A+K+F + +R +Q + V++N+L++ N E ++ QM
Sbjct: 242 VFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQM 301
Query: 305 QRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMV 364
+++ +PDV +Y+ LINA K + + A +F+EM G+ P + L+ + +G +
Sbjct: 302 EKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEI 361
Query: 365 DQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTL 424
D + ++ M PDI Y T+++ + D+ A + + G P+ ITY TL
Sbjct: 362 DLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTL 421
Query: 425 IKGYAKVNNLEKMMEIYDKMRVN-----------------------------------GI 449
I G+ + ++E +EI +M N GI
Sbjct: 422 IDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGI 481
Query: 450 KPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS-LAKTADERN 505
KP+ +T +MDA+ K D + KEM+S G P N+LL+ L K +N
Sbjct: 482 KPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKN 538
Score = 101 bits (251), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 133/287 (46%), Gaps = 5/287 (1%)
Query: 212 QIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFAL 271
Q +++L V A VF++L++ +P+ + ++ Y G A + F L
Sbjct: 138 QSLIELVVSRKGKNSASSVFISLVEMRVTPMC--GFLVDALMITYTDLGFIPDAIQCFRL 195
Query: 272 MAERGVQQSTVTYNSLMSFETNYKEVSKI---YDQMQRAGLQPDVVSYALLINAYGKARR 328
+ +L+ I Y ++ AG +V + +L+N + K
Sbjct: 196 SRKHRFDVPIRGCGNLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNKFCKEGN 255
Query: 329 EEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTT 388
+A VF+E+ ++PT ++N L++ + G +D+ + M + R PD+ +Y+
Sbjct: 256 ISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSA 315
Query: 389 MLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNG 448
+++A + M+GA F + + G +PN + + TLI G+++ ++ M E Y KM G
Sbjct: 316 LINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKG 375
Query: 449 IKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 495
++P+ ++ T+++ + KN D +A M G PD+ L+
Sbjct: 376 LQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLI 422
Score = 100 bits (249), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 112/220 (50%), Gaps = 3/220 (1%)
Query: 272 MAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARR 328
+ + G + +N LM+ E N + K++D++ + LQP VVS+ LIN Y K
Sbjct: 231 ILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGN 290
Query: 329 EEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTT 388
+E + +M + RP Y+ L++A +D A +F M + P+ +TT
Sbjct: 291 LDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTT 350
Query: 389 MLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNG 448
++ + +++ ++ ++++ G P+++ Y TL+ G+ K +L I D M G
Sbjct: 351 LIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRG 410
Query: 449 IKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQ 488
++P++ +TT++D + + D ++A+ KEM+ G D+
Sbjct: 411 LRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDR 450
Score = 84.3 bits (207), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 82/161 (50%)
Query: 336 FEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVN 395
+ E+LDAG +NIL++ F G + A+ VF + + P + S+ T+++ Y
Sbjct: 228 YMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCK 287
Query: 396 ASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTI 455
+++ + ++++ P+V TY LI K N ++ ++D+M G+ PN I
Sbjct: 288 VGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVI 347
Query: 456 FTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 496
FTT++ + +N + D Y++M S G PD N L++
Sbjct: 348 FTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVN 388
Score = 66.2 bits (160), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 88/194 (45%), Gaps = 3/194 (1%)
Query: 137 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 196
+++ + LI + + GD A ++ M++ G V +AL+ + GR +AE
Sbjct: 414 DKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERAL 473
Query: 197 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 256
R M +G +P +TY +++ F + +A+ F L + + P +++++
Sbjct: 474 REMLRAGIKPDDVTYTMMMDAFCKKG---DAQTGFKLLKEMQSDGHVPSVVTYNVLLNGL 530
Query: 257 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSY 316
K G + A L M GV +TYN+L+ + SK Y Q G+ D+ SY
Sbjct: 531 CKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGHHRHANSSKRYIQKPEIGIVADLASY 590
Query: 317 ALLINAYGKARREE 330
++N +A ++
Sbjct: 591 KSIVNELDRASKDH 604
>sp|Q9LR67|PPR9_ARATH Pentatricopeptide repeat-containing protein At1g03560,
mitochondrial OS=Arabidopsis thaliana GN=At1g03560 PE=2
SV=1
Length = 660
Score = 146 bits (368), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 90/357 (25%), Positives = 172/357 (48%), Gaps = 6/357 (1%)
Query: 127 WLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRG 186
W R Q + N ++ L+ D ++ V S + K + +V + AL++++G+
Sbjct: 141 WSRKQKKYTHNLECYVSLVDVLALAKDVDRIRFVSSEIKKFEFPMTVSAANALIKSFGKL 200
Query: 187 GRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQ 246
G + ++R+M+ +G P+ TY ++ V A AE VF + E +KPD
Sbjct: 201 GMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVM---ESGRIKPDI 257
Query: 247 KMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQ 303
++ MI Y KAG +KA + M RG + +TY +++ ++++ +Y +
Sbjct: 258 VTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQE 317
Query: 304 MQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGM 363
M G+Q +++L+I K + E VFE M+ G +P Y +L+D +A SG
Sbjct: 318 MDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGS 377
Query: 364 VDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGT 423
V+ A + M + PD+ +Y+ +++ +E A +F + DG N + Y +
Sbjct: 378 VEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSS 437
Query: 424 LIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEME 480
LI G K +++ ++++M G + + ++DA+ K++ D A+ +K ME
Sbjct: 438 LIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRME 494
Score = 106 bits (265), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 115/235 (48%), Gaps = 7/235 (2%)
Query: 141 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 200
F ++I K+G N+ V M +KG P+V +T L++ Y + G ++A + RM
Sbjct: 330 FSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMI 389
Query: 201 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 260
G +P +TY +++ + + +EA + F T L + + +I KAG
Sbjct: 390 DEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTC---RFDGLAINSMFYSSLIDGLGKAG 446
Query: 261 GYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRA----GLQPDVVSY 316
++A +LF M+E+G + + YN+L+ T +++V + +R G V +Y
Sbjct: 447 RVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTY 506
Query: 317 ALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVF 371
+L++ K R EEAL +++ M+D G+ PT + L +SG V +A +
Sbjct: 507 TILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKIL 561
Score = 87.8 bits (216), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 95/222 (42%), Gaps = 36/222 (16%)
Query: 311 PDVVSYA-LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQART 369
P VS A LI ++GK EE L V+ +M + G+ PT YN L++ + VD A
Sbjct: 184 PMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAER 243
Query: 370 VFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIK--- 426
VF+ M R PDI +Y TM+ Y A + A + R ++ G + ITY T+I+
Sbjct: 244 VFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACY 303
Query: 427 --------------------------------GYAKVNNLEKMMEIYDKMRVNGIKPNQT 454
G K L + +++ M G KPN
Sbjct: 304 ADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVA 363
Query: 455 IFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 496
I+T ++D Y K+ + A+ M GF PD +++++
Sbjct: 364 IYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVN 405
Score = 83.2 bits (204), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 92/185 (49%)
Query: 347 THKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFF 406
T A N L+ +F GMV++ V++ M+ + P + +Y +++ V+A ++ AE+ F
Sbjct: 186 TVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVF 245
Query: 407 RRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKN 466
++ P+++TY T+IKGY K +K ME M G + ++ + T++ A +
Sbjct: 246 EVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYAD 305
Query: 467 KDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGL 526
DF S V Y+EM+ G A ++++ + NE + N ++P +
Sbjct: 306 SDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIY 365
Query: 527 SISVD 531
++ +D
Sbjct: 366 TVLID 370
>sp|Q9SZ52|PP344_ARATH Pentatricopeptide repeat-containing protein At4g31850,
chloroplastic OS=Arabidopsis thaliana GN=PGR3 PE=1 SV=1
Length = 1112
Score = 145 bits (367), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 93/378 (24%), Positives = 179/378 (47%), Gaps = 6/378 (1%)
Query: 137 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 196
N F + I G+ G N+A ++L M+ +G P VV++T L++A + A+ +F
Sbjct: 257 NVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVF 316
Query: 197 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 256
+M++ +P +TY +L F + ++ + + EK PD F +++
Sbjct: 317 EKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEM---EKDGHVPDVVTFTILVDAL 373
Query: 257 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDV 313
KAG + +A +M ++G+ + TYN+L+ + +++ M+ G++P
Sbjct: 374 CKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTA 433
Query: 314 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 373
+Y + I+ YGK+ AL FE+M G+ P A N L + A +G +A+ +F
Sbjct: 434 YTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYG 493
Query: 374 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 433
++ PD +Y M+ Y +++ A K + ++G P+VI +LI K +
Sbjct: 494 LKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADR 553
Query: 434 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 493
+++ +++ +M+ +KP + T++ GKN A+ ++ M G PP+ N
Sbjct: 554 VDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNT 613
Query: 494 LLSLAKTADERNEANELL 511
L DE A ++L
Sbjct: 614 LFDCLCKNDEVTLALKML 631
Score = 132 bits (333), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 101/372 (27%), Positives = 167/372 (44%), Gaps = 37/372 (9%)
Query: 141 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 200
+L + + +G +A L M + G+ + S+ L+ + A ++RRM
Sbjct: 156 YLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMI 215
Query: 201 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 260
G RPS TY L V K ++ + V L + E LKP+ F + I + +AG
Sbjct: 216 LEGFRPSLQTYS---SLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAG 272
Query: 261 GYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLI 320
E +I +M G PDVV+Y +LI
Sbjct: 273 --------------------------------KINEAYEILKRMDDEGCGPDVVTYTVLI 300
Query: 321 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 380
+A AR+ + A VFE+M +P Y LLD F+ + +D + + M +D
Sbjct: 301 DALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHV 360
Query: 381 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 440
PD+ ++T ++ A A + A ++ G +PN+ TY TLI G +V+ L+ +E+
Sbjct: 361 PDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALEL 420
Query: 441 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI-LLSLAK 499
+ M G+KP + +D YGK+ D SA+ +++M++ G P+ A N L SLAK
Sbjct: 421 FGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAK 480
Query: 500 TADERNEANELL 511
+R EA ++
Sbjct: 481 AGRDR-EAKQIF 491
Score = 131 bits (330), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/330 (25%), Positives = 159/330 (48%), Gaps = 8/330 (2%)
Query: 163 FMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEAN 222
F G P + ++ L+ + A+ +F +++S+G P TY +L + ++
Sbjct: 775 FTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSG 834
Query: 223 KFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFA-LMAERGVQQST 281
K E E++ + E + + +++I KAG + A L+ LM++R +
Sbjct: 835 KIDELFELYKEMSTHE---CEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTA 891
Query: 282 VTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEE 338
TY L +S E ++++ M G +P+ Y +LIN +GKA + A A+F+
Sbjct: 892 CTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKR 951
Query: 339 MLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASD 398
M+ GVRP K Y++L+D + G VD+ FK ++ +PD+ Y +++ +
Sbjct: 952 MVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHR 1011
Query: 399 MEGAEKFFRRLKQD-GFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFT 457
+E A F +K G P++ TY +LI +E+ +IY++++ G++PN F
Sbjct: 1012 LEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFN 1071
Query: 458 TIMDAYGKNKDFDSAVVWYKEMESCGFPPD 487
++ Y + + A Y+ M + GF P+
Sbjct: 1072 ALIRGYSLSGKPEHAYAVYQTMVTGGFSPN 1101
Score = 131 bits (329), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 105/445 (23%), Positives = 203/445 (45%), Gaps = 12/445 (2%)
Query: 75 RLMNQIEEVGSAVAVLRSERTRGQPLPKDLVLGTLV--RLKQLKKWNVVSEVLEWLRIQS 132
R++ + ++ A +L+ R + D+V T++ L +K + EV E ++
Sbjct: 266 RVLGRAGKINEAYEILK--RMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGR 323
Query: 133 WWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNA 192
+ + ++ L+ + D + ++ S M K G+ P VV+ T L++A + G + A
Sbjct: 324 HKP-DRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEA 382
Query: 193 EAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMM 252
M+ G P+ TY ++ + ++ +A E+F + E +KP + +
Sbjct: 383 FDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNM---ESLGVKPTAYTYIVF 439
Query: 253 IYMYKKAGGYEKARKLFALMAERGVQQSTVTYN-SLMSFETNYK--EVSKIYDQMQRAGL 309
I Y K+G A + F M +G+ + V N SL S + E +I+ ++ GL
Sbjct: 440 IDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGL 499
Query: 310 QPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQART 369
PD V+Y +++ Y K +EA+ + EM++ G P N L++ + VD+A
Sbjct: 500 VPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWK 559
Query: 370 VFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYA 429
+F M+ + P + +Y T+L+ ++ A + F + Q G PN IT+ TL
Sbjct: 560 MFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLC 619
Query: 430 KVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQK 489
K + + +++ KM G P+ + TI+ KN A+ ++ +M+ +P
Sbjct: 620 KNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVT 679
Query: 490 AKNILLSLAKTADERNEANELLGNF 514
+L + K A +A +++ NF
Sbjct: 680 LCTLLPGVVK-ASLIEDAYKIITNF 703
Score = 129 bits (324), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 153/310 (49%), Gaps = 9/310 (2%)
Query: 192 AEAIFRRMQSS-GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFH 250
A +F + G +P TY +++ +EA+ + A++VF+ + + + PD ++
Sbjct: 768 ARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQV---KSTGCIPDVATYN 824
Query: 251 MMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKI----YDQMQR 306
++ Y K+G ++ +L+ M+ + +T+T+N ++S V YD M
Sbjct: 825 FLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSD 884
Query: 307 AGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQ 366
P +Y LI+ K+ R EA +FE MLD G RP YNIL++ F +G D
Sbjct: 885 RDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADA 944
Query: 367 ARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIK 426
A +FK M ++ PD+ +Y+ ++ ++ +F+ LK+ G P+V+ Y +I
Sbjct: 945 ACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIIN 1004
Query: 427 GYAKVNNLEKMMEIYDKMRVN-GIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFP 485
G K + LE+ + ++++M+ + GI P+ + +++ G + A Y E++ G
Sbjct: 1005 GLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLE 1064
Query: 486 PDQKAKNILL 495
P+ N L+
Sbjct: 1065 PNVFTFNALI 1074
Score = 123 bits (308), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 150/304 (49%), Gaps = 6/304 (1%)
Query: 157 AEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILK 216
A+ V + G P V ++ L++AYG+ G+ +++ M + + +T+ I++
Sbjct: 804 AQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVIS 863
Query: 217 LFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERG 276
V+A +A +++ L+ + P + +I K+G +A++LF M + G
Sbjct: 864 GLVKAGNVDDALDLYYDLMSDRD--FSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYG 921
Query: 277 VQQSTVTYNSLMSFETNYKEV---SKIYDQMQRAGLQPDVVSYALLINAYGKARREEEAL 333
+ + YN L++ E ++ +M + G++PD+ +Y++L++ R +E L
Sbjct: 922 CRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGL 981
Query: 334 AVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR-CSPDICSYTTMLSA 392
F+E+ ++G+ P YN++++ S +++A +F M+ R +PD+ +Y +++
Sbjct: 982 HYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILN 1041
Query: 393 YVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPN 452
A +E A K + +++ G PNV T+ LI+GY+ E +Y M G PN
Sbjct: 1042 LGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPN 1101
Query: 453 QTIF 456
+
Sbjct: 1102 TGTY 1105
Score = 120 bits (301), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 144/283 (50%), Gaps = 8/283 (2%)
Query: 144 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 203
L+ AYGK G ++ ++ M+ + ++H ++ + G +A ++ + S
Sbjct: 826 LLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDR 885
Query: 204 P-RPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 262
P+A TY ++ ++ + EA+++F +LD +P+ +++++I + KAG
Sbjct: 886 DFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLD---YGCRPNCAIYNILINGFGKAGEA 942
Query: 263 EKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALL 319
+ A LF M + GV+ TY+ L+ V + + +++ +GL PDVV Y L+
Sbjct: 943 DAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLI 1002
Query: 320 INAYGKARREEEALAVFEEMLDA-GVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 378
IN GK+ R EEAL +F EM + G+ P YN L+ I+GMV++A ++ ++R
Sbjct: 1003 INGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAG 1062
Query: 379 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITY 421
P++ ++ ++ Y + E A ++ + GF PN TY
Sbjct: 1063 LEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTY 1105
Score = 107 bits (266), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 100/454 (22%), Positives = 183/454 (40%), Gaps = 45/454 (9%)
Query: 112 LKQLKKWNVVSEVLEWLR--IQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGY 169
L L K + E +E +Q N + F L K + A K+L M G
Sbjct: 580 LAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGC 639
Query: 170 APSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEA-- 227
P V ++ ++ + G+ K A F +M+ P +T +L V+A+ ++A
Sbjct: 640 VPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL-VYPDFVTLCTLLPGVVKASLIEDAYK 698
Query: 228 ------------------EEVFMTLLDEE--------------KSPLKPDQKMFHMMIYM 255
E++ ++L E + + +I
Sbjct: 699 IITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRY 758
Query: 256 YKKAGGYEKARKLF-ALMAERGVQQSTVTYNSLMS--FETNYKEVSK-IYDQMQRAGLQP 311
K AR LF + GVQ TYN L+ E + E+++ ++ Q++ G P
Sbjct: 759 SCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIP 818
Query: 312 DVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVF 371
DV +Y L++AYGK+ + +E +++EM +NI++ +G VD A ++
Sbjct: 819 DVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLY 878
Query: 372 KCMRRDR-CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAK 430
+ DR SP C+Y ++ + + A++ F + G PN Y LI G+ K
Sbjct: 879 YDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGK 938
Query: 431 VNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKA 490
+ ++ +M G++P+ ++ ++D D + ++KE++ G PD
Sbjct: 939 AGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVC 998
Query: 491 KNILLSLAKTADERNEANELLGNFNHPNNEPGIN 524
N++++ + EA L FN GI
Sbjct: 999 YNLIINGLGKSHRLEEALVL---FNEMKTSRGIT 1029
Score = 107 bits (266), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 137/302 (45%), Gaps = 6/302 (1%)
Query: 223 KFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTV 282
K +E VF + +K +K D + + GG ++A M E G +
Sbjct: 133 KLEEMAYVFDLM---QKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAY 189
Query: 283 TYNSLMSFETNYK---EVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEM 339
+YN L+ + E ++Y +M G +P + +Y+ L+ GK R + + + +EM
Sbjct: 190 SYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEM 249
Query: 340 LDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDM 399
G++P + I + +G +++A + K M + C PD+ +YT ++ A A +
Sbjct: 250 ETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKL 309
Query: 400 EGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTI 459
+ A++ F ++K P+ +TY TL+ ++ +L+ + + + +M +G P+ FT +
Sbjct: 310 DCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTIL 369
Query: 460 MDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNN 519
+DA K +F A M G P+ N L+ ++A EL GN
Sbjct: 370 VDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGV 429
Query: 520 EP 521
+P
Sbjct: 430 KP 431
Score = 82.4 bits (202), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 90/185 (48%)
Query: 347 THKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFF 406
T + N +L+A + G +++ VF M++ D +Y T+ + ++ A
Sbjct: 117 TTETCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYAL 176
Query: 407 RRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKN 466
R++++ GFV N +Y LI K + ME+Y +M + G +P+ ++++M GK
Sbjct: 177 RKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKR 236
Query: 467 KDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGL 526
+D DS + KEME+ G P+ I + + A + NEA E+L + P +
Sbjct: 237 RDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTY 296
Query: 527 SISVD 531
++ +D
Sbjct: 297 TVLID 301
>sp|Q9LFF1|PP281_ARATH Pentatricopeptide repeat-containing protein At3g53700,
chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1
Length = 754
Score = 145 bits (367), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 99/379 (26%), Positives = 177/379 (46%), Gaps = 7/379 (1%)
Query: 137 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 196
+E F ++ Y ++GD + A ++ M + G + S VS ++ + + GR ++A
Sbjct: 223 DEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFI 282
Query: 197 RRMQSS-GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYM 255
+ M + G P T+ ++ +A K A E+ +L E PD ++ +I
Sbjct: 283 QEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQE---GYDPDVYTYNSVISG 339
Query: 256 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPD 312
K G ++A ++ M R +TVTYN+L+S E +E +++ + G+ PD
Sbjct: 340 LCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPD 399
Query: 313 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 372
V ++ LI R A+ +FEEM G P YN+L+D+ G +D+A + K
Sbjct: 400 VCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLK 459
Query: 373 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 432
M C+ + +Y T++ + A+ AE+ F ++ G N +TY TLI G K
Sbjct: 460 QMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSR 519
Query: 433 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKN 492
+E ++ D+M + G KP++ + +++ + + D A + M S G PD
Sbjct: 520 RVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYG 579
Query: 493 ILLSLAKTADERNEANELL 511
L+S A A++LL
Sbjct: 580 TLISGLCKAGRVEVASKLL 598
Score = 132 bits (332), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 87/363 (23%), Positives = 165/363 (45%), Gaps = 7/363 (1%)
Query: 137 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 196
++ F L+ K G A +++ M ++GY P V ++ +++ + G K A +
Sbjct: 294 DQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVL 353
Query: 197 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 256
+M + P+ +TY ++ + N+ +EA E+ L + + PD F+ +I
Sbjct: 354 DQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSK---GILPDVCTFNSLIQGL 410
Query: 257 KKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDV 313
+ A +LF M +G + TYN L + + E + QM+ +G V
Sbjct: 411 CLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSV 470
Query: 314 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 373
++Y LI+ + KA + EA +F+EM GV YN L+D S V+ A +
Sbjct: 471 ITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQ 530
Query: 374 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 433
M + PD +Y ++L+ + D++ A + + +G P+++TYGTLI G K
Sbjct: 531 MIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGR 590
Query: 434 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEM-ESCGFPPDQKAKN 492
+E ++ +++ GI + ++ + + A+ ++EM E PPD +
Sbjct: 591 VEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYR 650
Query: 493 ILL 495
I+
Sbjct: 651 IVF 653
Score = 131 bits (330), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 96/386 (24%), Positives = 172/386 (44%), Gaps = 5/386 (1%)
Query: 141 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 200
F +LI A + A +L M G P + T +M+ Y G A I +M
Sbjct: 192 FNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMV 251
Query: 201 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 260
G S ++ +I+ F + + ++A + +++ PDQ F+ ++ KAG
Sbjct: 252 EFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDG--FFPDQYTFNTLVNGLCKAG 309
Query: 261 GYEKARKLFALMAERGVQQSTVTYNSLMSFETNY---KEVSKIYDQMQRAGLQPDVVSYA 317
+ A ++ +M + G TYNS++S KE ++ DQM P+ V+Y
Sbjct: 310 HVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYN 369
Query: 318 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 377
LI+ K + EEA + + G+ P +N L+ ++ A +F+ MR
Sbjct: 370 TLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSK 429
Query: 378 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 437
C PD +Y ++ + + ++ A ++++ G +VITY TLI G+ K N +
Sbjct: 430 GCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREA 489
Query: 438 MEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSL 497
EI+D+M V+G+ N + T++D K++ + A +M G PD+ N LL+
Sbjct: 490 EEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTH 549
Query: 498 AKTADERNEANELLGNFNHPNNEPGI 523
+ +A +++ EP I
Sbjct: 550 FCRGGDIKKAADIVQAMTSNGCEPDI 575
Score = 108 bits (271), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 97/441 (21%), Positives = 168/441 (38%), Gaps = 73/441 (16%)
Query: 144 LITAYGKQGDFNKAEKVLSFMNKK-GYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 202
L+ + Q D + A ++ + +KK ++P + ++ GR G + + + I M+SS
Sbjct: 53 LLDSLRSQPDDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSS 112
Query: 203 ------------------------------------GPRPSALTYQIILKLFVEANKFKE 226
G +P Y +L L V+ N K
Sbjct: 113 RCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKL 172
Query: 227 AE--------------------------------EVFMTLLDEEKSPLKPDQKMFHMMIY 254
E + L D L PD+K F ++
Sbjct: 173 VEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQ 232
Query: 255 MYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRA----GLQ 310
Y + G + A ++ M E G S V+ N ++ V + +Q G
Sbjct: 233 GYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFF 292
Query: 311 PDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTV 370
PD ++ L+N KA + A+ + + ML G P YN ++ G V +A V
Sbjct: 293 PDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEV 352
Query: 371 FKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAK 430
M CSP+ +Y T++S + +E A + R L G +P+V T+ +LI+G
Sbjct: 353 LDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCL 412
Query: 431 VNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKA 490
N ME++++MR G +P++ + ++D+ D A+ K+ME G
Sbjct: 413 TRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVIT 472
Query: 491 KNILLSLAKTADERNEANELL 511
N L+ A++ EA E+
Sbjct: 473 YNTLIDGFCKANKTREAEEIF 493
>sp|Q9FLJ4|PP440_ARATH Pentatricopeptide repeat-containing protein At5g61400
OS=Arabidopsis thaliana GN=At5g61400 PE=2 SV=1
Length = 654
Score = 144 bits (364), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 91/341 (26%), Positives = 162/341 (47%), Gaps = 6/341 (1%)
Query: 141 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 200
+ +L KQG ++K EK+L M G P+V +T + R + + AE +F M+
Sbjct: 202 YFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMK 261
Query: 201 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 260
G P+ TY ++ + + ++A ++ +L E L P+ +F ++ + KA
Sbjct: 262 KHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAE---LLPNVVVFGTLVDGFCKAR 318
Query: 261 GYEKARKLFALMAERGVQQSTVTYNSLMSFET---NYKEVSKIYDQMQRAGLQPDVVSYA 317
AR LF M + GV + YN L+ N E + +M+ L PDV +Y
Sbjct: 319 ELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYT 378
Query: 318 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 377
+LIN + EA +F++M + + P+ YN L+ + ++QA + M
Sbjct: 379 ILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTAS 438
Query: 378 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 437
P+I +++T++ Y N D++ A + + G VP+V+TY LI + K N+++
Sbjct: 439 GVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEA 498
Query: 438 MEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKE 478
+ +Y M GI PN F ++D + K A+ +Y+E
Sbjct: 499 LRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQE 539
Score = 137 bits (346), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/351 (26%), Positives = 172/351 (49%), Gaps = 11/351 (3%)
Query: 141 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 200
F +LI + + G F E+ L + +P + +++ R R+ + ++ M
Sbjct: 135 FSLLIMEFLEMGLF---EEALWVSREMKCSPDSKACLSILNGLVRRRRFDSVWVDYQLMI 191
Query: 201 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKS-PLKPDQKMFHMMIYMYKKA 259
S G P Y ++ + + + + E+ LLDE S +KP+ ++ + I +
Sbjct: 192 SRGLVPDVHIYFVLFQCCFKQGLYSKKEK----LLDEMTSLGIKPNVYIYTIYILDLCRD 247
Query: 260 GGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSY 316
E+A K+F LM + GV + TY++++ N ++ +Y ++ A L P+VV +
Sbjct: 248 NKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVF 307
Query: 317 ALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRR 376
L++ + KAR A ++F M+ GV P YN L+ SG + +A + M
Sbjct: 308 GTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMES 367
Query: 377 DRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEK 436
SPD+ +YT +++ + A + F+++K + P+ TY +LI GY K N+E+
Sbjct: 368 LNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQ 427
Query: 437 MMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 487
+++ +M +G++PN F+T++D Y +D +A+ Y EM G PD
Sbjct: 428 ALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPD 478
Score = 122 bits (307), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 80/340 (23%), Positives = 155/340 (45%), Gaps = 6/340 (1%)
Query: 137 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 196
N + F L+ + K + A + M K G P++ + L+ + + G A +
Sbjct: 303 NVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLL 362
Query: 197 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 256
M+S P TY I++ ++ EA +F + +E + P ++ +I+ Y
Sbjct: 363 SEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNER---IFPSSATYNSLIHGY 419
Query: 257 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDV 313
K E+A L + M GV+ + +T+++L+ N +++ +Y +M G+ PDV
Sbjct: 420 CKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDV 479
Query: 314 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 373
V+Y LI+A+ K +EAL ++ +ML+AG+ P + L+D F G + A ++
Sbjct: 480 VTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQE 539
Query: 374 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 433
+ R + +T ++ + A +FF ++ G P++ +Y +++KG+ +
Sbjct: 540 NNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKR 599
Query: 434 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAV 473
+ M + M GI PN + + Y N SA
Sbjct: 600 ITDTMMLQCDMIKTGILPNLLVNQLLARFYQANGYVKSAC 639
Score = 85.9 bits (211), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 79/337 (23%), Positives = 135/337 (40%), Gaps = 31/337 (9%)
Query: 223 KFKEAEEVFMTLLDEEKSPLKP--DQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQS 280
K + AEE F +S + D + F +I++ A Y AR L + ER + S
Sbjct: 50 KCRSAEEAFKLFETSSRSRVSKSNDLQSFSAVIHVLTGAHKYTLARCLIKSLIERLKRHS 109
Query: 281 TVT------YNSLMSFET---NYKEVSKIYDQMQRAGL-------------QPDVVSYAL 318
+ +N+L ++ + S + + GL PD +
Sbjct: 110 EPSNMSHRLFNALEDIQSPKFSIGVFSLLIMEFLEMGLFEEALWVSREMKCSPDSKACLS 169
Query: 319 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 378
++N + RR + ++ M+ G+ P Y +L G+ + + M
Sbjct: 170 ILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLG 229
Query: 379 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 438
P++ YT + + ME AEK F +K+ G +PN+ TY +I GY K N+ +
Sbjct: 230 IKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAY 289
Query: 439 EIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLA 498
+Y ++ V + PN +F T++D + K ++ +A + M G P+ N L+
Sbjct: 290 GLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGH 349
Query: 499 KTADERNEANELLGNFNHPNNEPG-------INGLSI 528
+ EA LL N P INGL I
Sbjct: 350 CKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCI 386
>sp|Q9FLL3|PP412_ARATH Pentatricopeptide repeat-containing protein At5g41170,
mitochondrial OS=Arabidopsis thaliana GN=At5g41170 PE=2
SV=1
Length = 527
Score = 144 bits (363), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 90/364 (24%), Positives = 171/364 (46%), Gaps = 11/364 (3%)
Query: 139 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 198
+DF L+ K F+ + + G + + + LM + + + A + +
Sbjct: 73 IDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGK 132
Query: 199 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEE-KSPLKPDQKMFHMMIYMYK 257
M G P +T+ ++ F N+ +EA M+++++ + +KPD M+ +I
Sbjct: 133 MMKLGFEPDIVTFTSLINGFCLGNRMEEA----MSMVNQMVEMGIKPDVVMYTTIIDSLC 188
Query: 258 KAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVV 314
K G A LF M G++ V Y SL++ N +++ + M + ++PDV+
Sbjct: 189 KNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVI 248
Query: 315 SYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCM 374
++ LI+A+ K + +A ++ EM+ + P Y L++ F + G VD+AR +F M
Sbjct: 249 TFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLM 308
Query: 375 RRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNL 434
C PD+ +YT++++ + ++ A K F + Q G N ITY TLI+G+ +V
Sbjct: 309 ETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKP 368
Query: 435 EKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEM---ESCGFPPDQKAK 491
E++ M G+ PN + ++ N A++ +++M E G P+
Sbjct: 369 NVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTY 428
Query: 492 NILL 495
N+LL
Sbjct: 429 NVLL 432
Score = 137 bits (344), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 89/343 (25%), Positives = 170/343 (49%), Gaps = 9/343 (2%)
Query: 144 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 203
+I + K G N A + M G P VV +T+L+ GR+++A+++ R M
Sbjct: 183 IIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRK 242
Query: 204 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 263
+P +T+ ++ FV+ KF +AEE++ ++ + + P+ + +I + G +
Sbjct: 243 IKPDVITFNALIDAFVKEGKFLDAEELYNEMI---RMSIAPNIFTYTSLINGFCMEGCVD 299
Query: 264 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYALLI 320
+AR++F LM +G V Y SL++ K+V KI+ +M + GL + ++Y LI
Sbjct: 300 EARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLI 359
Query: 321 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRR---D 377
+G+ + A VF M+ GV P + YN+LL +G V +A +F+ M++ D
Sbjct: 360 QGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMD 419
Query: 378 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 437
+P+I +Y +L +E A F +++ +ITY +I+G K ++
Sbjct: 420 GVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNA 479
Query: 438 MEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEME 480
+ ++ + G+KPN +TT++ + A V +++M+
Sbjct: 480 VNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMK 522
Score = 129 bits (323), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 81/345 (23%), Positives = 162/345 (46%), Gaps = 6/345 (1%)
Query: 154 FNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQI 213
FN+A + + M + PS++ T L+ + ++ + +Q G T +
Sbjct: 53 FNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNL 112
Query: 214 ILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMA 273
++ F ++++ A ++ K +PD F +I + E+A + M
Sbjct: 113 LMNCFCQSSQPYLASSFLGKMM---KLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMV 169
Query: 274 ERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYALLINAYGKARREE 330
E G++ V Y +++ V+ ++DQM+ G++PDVV Y L+N + R
Sbjct: 170 EMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWR 229
Query: 331 EALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTML 390
+A ++ M ++P +N L+DAF G A ++ M R +P+I +YT+++
Sbjct: 230 DADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLI 289
Query: 391 SAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIK 450
+ + ++ A + F ++ G P+V+ Y +LI G+ K ++ M+I+ +M G+
Sbjct: 290 NGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLT 349
Query: 451 PNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 495
N +TT++ +G+ + A + M S G PP+ + N+LL
Sbjct: 350 GNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLL 394
Score = 112 bits (279), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/340 (22%), Positives = 152/340 (44%), Gaps = 8/340 (2%)
Query: 188 RYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE-EKSPLKPDQ 246
++ A +F M S P PS + + +L + + KF +V + L D + + D
Sbjct: 52 QFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKF----DVVINLCDHLQIMGVSHDL 107
Query: 247 KMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQ 303
++++ + ++ A M + G + VT+ SL+ +E + +Q
Sbjct: 108 YTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQ 167
Query: 304 MQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGM 363
M G++PDVV Y +I++ K AL++F++M + G+RP Y L++ SG
Sbjct: 168 MVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGR 227
Query: 364 VDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGT 423
A ++ + M + + PD+ ++ ++ A+V AE+ + + + PN+ TY +
Sbjct: 228 WRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTS 287
Query: 424 LIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCG 483
LI G+ +++ +++ M G P+ +T++++ + K K D A+ + EM G
Sbjct: 288 LINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKG 347
Query: 484 FPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGI 523
+ L+ + N A E+ + P I
Sbjct: 348 LTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNI 387
Score = 107 bits (268), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 136/289 (47%), Gaps = 6/289 (2%)
Query: 211 YQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFA 270
Y+ IL+ + + +F EA ++F +++ P D F ++ + K ++ L
Sbjct: 40 YREILRNGLHSLQFNEALDLFTHMVESRPLPSIID---FTKLLNVIAKMKKFDVVINLCD 96
Query: 271 LMAERGVQQSTVTYNSLMSFETNYKE---VSKIYDQMQRAGLQPDVVSYALLINAYGKAR 327
+ GV T N LM+ + S +M + G +PD+V++ LIN +
Sbjct: 97 HLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGN 156
Query: 328 REEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYT 387
R EEA+++ +M++ G++P Y ++D+ +G V+ A ++F M PD+ YT
Sbjct: 157 RMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYT 216
Query: 388 TMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVN 447
++++ N+ A+ R + + P+VIT+ LI + K E+Y++M
Sbjct: 217 SLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRM 276
Query: 448 GIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 496
I PN +T++++ + D A + ME+ G PD A L++
Sbjct: 277 SIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLIN 325
Score = 84.7 bits (208), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 120/283 (42%), Gaps = 44/283 (15%)
Query: 137 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 196
N + LI + +G ++A ++ M KG P VV++T+L+ + + + +A IF
Sbjct: 281 NIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIF 340
Query: 197 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 256
M G + +TY +++ F + K A+EV
Sbjct: 341 YEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEV-------------------------- 374
Query: 257 KKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRA---GLQ 310
F+ M RGV + TYN L + + K+ I++ MQ+ G+
Sbjct: 375 ------------FSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVA 422
Query: 311 PDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTV 370
P++ +Y +L++ + E+AL VFE+M + Y I++ +G V A +
Sbjct: 423 PNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNL 482
Query: 371 FKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDG 413
F + P++ +YTTM+S A FR++K+DG
Sbjct: 483 FCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDG 525
Score = 74.7 bits (182), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 98/201 (48%)
Query: 331 EALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTML 390
EAL +F M+++ P+ + LL+ A D + ++ S D+ + ++
Sbjct: 55 EALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLM 114
Query: 391 SAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIK 450
+ + +S A F ++ + GF P+++T+ +LI G+ N +E+ M + ++M GIK
Sbjct: 115 NCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIK 174
Query: 451 PNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANEL 510
P+ ++TTI+D+ KN + A+ + +ME+ G PD L++ + +A+ L
Sbjct: 175 PDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSL 234
Query: 511 LGNFNHPNNEPGINGLSISVD 531
L +P + + +D
Sbjct: 235 LRGMTKRKIKPDVITFNALID 255
Score = 73.9 bits (180), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 99/204 (48%), Gaps = 3/204 (1%)
Query: 144 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 203
LI + K + A K+ M++KG + +++T L++ +G+ G+ A+ +F M S G
Sbjct: 323 LINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRG 382
Query: 204 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 263
P+ TY ++L K K+A +F + E + P+ ++++++ G E
Sbjct: 383 VPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLE 442
Query: 264 KARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLI 320
KA +F M +R + +TY + M K ++ + G++P+VV+Y +I
Sbjct: 443 KALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMI 502
Query: 321 NAYGKARREEEALAVFEEMLDAGV 344
+ + + EA +F +M + GV
Sbjct: 503 SGLFREGLKHEAHVLFRKMKEDGV 526
Score = 34.3 bits (77), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/104 (18%), Positives = 48/104 (46%)
Query: 384 CSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDK 443
C+Y +L +++ A F + + +P++I + L+ AK+ + ++ + D
Sbjct: 38 CNYREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDH 97
Query: 444 MRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 487
+++ G+ + +M+ + ++ A + +M GF PD
Sbjct: 98 LQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPD 141
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.134 0.390
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 227,923,102
Number of Sequences: 539616
Number of extensions: 10397247
Number of successful extensions: 117576
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1219
Number of HSP's successfully gapped in prelim test: 480
Number of HSP's that attempted gapping in prelim test: 66955
Number of HSP's gapped (non-prelim): 20394
length of query: 599
length of database: 191,569,459
effective HSP length: 123
effective length of query: 476
effective length of database: 125,196,691
effective search space: 59593624916
effective search space used: 59593624916
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)