BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 007547
(599 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1J9Z|A Chain A, Cypor-W677g
pdb|1J9Z|B Chain B, Cypor-W677g
Length = 622
Score = 350 bits (897), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 194/507 (38%), Positives = 283/507 (55%), Gaps = 26/507 (5%)
Query: 86 VTVFYGTQTGTAEGFAKALAEEIKARYEKAAVKVVDLDDYAMDDEQYEEKLKKETLAFFM 145
+ VFYG+QTGTAE FA L+++ RY + D ++Y + D ++ K +L F
Sbjct: 24 IIVFYGSQTGTAEEFANRLSKDAH-RYGMRGMSA-DPEEYDLADLSSLPEIDK-SLVVFC 80
Query: 146 VATYGDGEPTDNAARFYKWFTEGNDRGPWLQQLKFGVFGLGNRQYEHFNKIGIVLDEELC 205
+ATYG+G+PTDNA FY W E + L +KF VFGLGN+ YEHFN +G +D+ L
Sbjct: 81 MATYGEGDPTDNAQDFYDWLQETDVD---LTGVKFAVFGLGNKTYEHFNAMGKYVDQRLE 137
Query: 206 KQGGARLVPLGLGDDDQCIEDDFTAWRELVWPELDQLLRDEDDANTVSTPYTAAIPEYRV 265
+ G R+ LGLGDDD +E+DF WRE WP + + E +T ++I +Y +
Sbjct: 138 QLGAQRIFELGLGDDDGNLEEDFITWREQFWPAVCEFFGVE------ATGEESSIRQYEL 191
Query: 266 MIH-----GPTVTSSVDNYSNMPNGNASFDIHHPCRVNVAVRRELHKPDSDRSCIHLEFD 320
++H T + + N FD +P V R+L++ ++R +HLE D
Sbjct: 192 VVHEDMDVAKVYTGEMGRLKSYENQKPPFDAKNPFLAAVTANRKLNQ-GTERHLMHLELD 250
Query: 321 VSGTGITYETGDHVGVYVENCDETVEEAGKXXXXXXXXXXXXHTDNEDGTPRGSSLTPPF 380
+S + I YE+GDHV VY N V + G+ + +E+ S+ PF
Sbjct: 251 ISDSKIRYESGDHVAVYPANDSALVNQIGEILGADLDVIMSLNNLDEE-----SNKKHPF 305
Query: 381 PGPCTLRTALARYADILNPPRKXXXXXXXXXXTEPSEAERLKFL--SSPQGKDDYSQWVV 438
P P T RTAL Y DI NPPR +EPSE E L + SS +GK+ Y WVV
Sbjct: 306 PCPTTYRTALTYYLDITNPPRTNVLYELAQYASEPSEQEHLHKMASSSGEGKELYLSWVV 365
Query: 439 ASQRSLLEVMAEFPSATPPIGVFFAAVAPHLQPRYYSISSSPRFAPDRVHVTCALVYGPT 498
++R +L ++ ++PS PPI + P LQ RYYSI+SS + P+ VH+ V
Sbjct: 366 EARRHILAILQDYPSLRPPID-HLCELLPRLQARYYSIASSSKVHPNSVHICAVAVEYEA 424
Query: 499 PTGRIHKGVCSTWMKNAIPLEGNGDCSWAPIFIRPSNFKLPANPSVPIIMVGPGTGLAPF 558
+GR++KGV ++W++ P NG + P+F+R S F+LP + P+IMVGPGTG+APF
Sbjct: 425 KSGRVNKGVATSWLRAKEPAGENGGRALVPMFVRKSQFRLPFKSTTPVIMVGPGTGIAPF 484
Query: 559 RGFLQERMALKQDGAQLGPALLFFGCR 585
GF+QER L++ G ++G LL++GCR
Sbjct: 485 MGFIQERAWLREQGKEVGETLLYYGCR 511
>pdb|1AMO|A Chain A, Three-Dimensional Structure Of Nadph-Cytochrome P450
Reductase: Prototype For Fmn-And Fad-Containing Enzymes
pdb|1AMO|B Chain B, Three-Dimensional Structure Of Nadph-Cytochrome P450
Reductase: Prototype For Fmn-And Fad-Containing Enzymes
Length = 615
Score = 350 bits (897), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 194/507 (38%), Positives = 283/507 (55%), Gaps = 26/507 (5%)
Query: 86 VTVFYGTQTGTAEGFAKALAEEIKARYEKAAVKVVDLDDYAMDDEQYEEKLKKETLAFFM 145
+ VFYG+QTGTAE FA L+++ RY + D ++Y + D ++ K +L F
Sbjct: 17 IIVFYGSQTGTAEEFANRLSKDAH-RYGMRGMSA-DPEEYDLADLSSLPEIDK-SLVVFC 73
Query: 146 VATYGDGEPTDNAARFYKWFTEGNDRGPWLQQLKFGVFGLGNRQYEHFNKIGIVLDEELC 205
+ATYG+G+PTDNA FY W E + L +KF VFGLGN+ YEHFN +G +D+ L
Sbjct: 74 MATYGEGDPTDNAQDFYDWLQETDVD---LTGVKFAVFGLGNKTYEHFNAMGKYVDQRLE 130
Query: 206 KQGGARLVPLGLGDDDQCIEDDFTAWRELVWPELDQLLRDEDDANTVSTPYTAAIPEYRV 265
+ G R+ LGLGDDD +E+DF WRE WP + + E +T ++I +Y +
Sbjct: 131 QLGAQRIFELGLGDDDGNLEEDFITWREQFWPAVCEFFGVE------ATGEESSIRQYEL 184
Query: 266 MIH-----GPTVTSSVDNYSNMPNGNASFDIHHPCRVNVAVRRELHKPDSDRSCIHLEFD 320
++H T + + N FD +P V R+L++ ++R +HLE D
Sbjct: 185 VVHEDMDVAKVYTGEMGRLKSYENQKPPFDAKNPFLAAVTANRKLNQ-GTERHLMHLELD 243
Query: 321 VSGTGITYETGDHVGVYVENCDETVEEAGKXXXXXXXXXXXXHTDNEDGTPRGSSLTPPF 380
+S + I YE+GDHV VY N V + G+ + +E+ S+ PF
Sbjct: 244 ISDSKIRYESGDHVAVYPANDSALVNQIGEILGADLDVIMSLNNLDEE-----SNKKHPF 298
Query: 381 PGPCTLRTALARYADILNPPRKXXXXXXXXXXTEPSEAERLKFL--SSPQGKDDYSQWVV 438
P P T RTAL Y DI NPPR +EPSE E L + SS +GK+ Y WVV
Sbjct: 299 PCPTTYRTALTYYLDITNPPRTNVLYELAQYASEPSEQEHLHKMASSSGEGKELYLSWVV 358
Query: 439 ASQRSLLEVMAEFPSATPPIGVFFAAVAPHLQPRYYSISSSPRFAPDRVHVTCALVYGPT 498
++R +L ++ ++PS PPI + P LQ RYYSI+SS + P+ VH+ V
Sbjct: 359 EARRHILAILQDYPSLRPPID-HLCELLPRLQARYYSIASSSKVHPNSVHICAVAVEYEA 417
Query: 499 PTGRIHKGVCSTWMKNAIPLEGNGDCSWAPIFIRPSNFKLPANPSVPIIMVGPGTGLAPF 558
+GR++KGV ++W++ P NG + P+F+R S F+LP + P+IMVGPGTG+APF
Sbjct: 418 KSGRVNKGVATSWLRAKEPAGENGGRALVPMFVRKSQFRLPFKSTTPVIMVGPGTGIAPF 477
Query: 559 RGFLQERMALKQDGAQLGPALLFFGCR 585
GF+QER L++ G ++G LL++GCR
Sbjct: 478 MGFIQERAWLREQGKEVGETLLYYGCR 504
>pdb|1JA0|A Chain A, Cypor-W677x
pdb|1JA0|B Chain B, Cypor-W677x
Length = 620
Score = 349 bits (896), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 194/507 (38%), Positives = 283/507 (55%), Gaps = 26/507 (5%)
Query: 86 VTVFYGTQTGTAEGFAKALAEEIKARYEKAAVKVVDLDDYAMDDEQYEEKLKKETLAFFM 145
+ VFYG+QTGTAE FA L+++ RY + D ++Y + D ++ K +L F
Sbjct: 24 IIVFYGSQTGTAEEFANRLSKDAH-RYGMRGMSA-DPEEYDLADLSSLPEIDK-SLVVFC 80
Query: 146 VATYGDGEPTDNAARFYKWFTEGNDRGPWLQQLKFGVFGLGNRQYEHFNKIGIVLDEELC 205
+ATYG+G+PTDNA FY W E + L +KF VFGLGN+ YEHFN +G +D+ L
Sbjct: 81 MATYGEGDPTDNAQDFYDWLQETDVD---LTGVKFAVFGLGNKTYEHFNAMGKYVDQRLE 137
Query: 206 KQGGARLVPLGLGDDDQCIEDDFTAWRELVWPELDQLLRDEDDANTVSTPYTAAIPEYRV 265
+ G R+ LGLGDDD +E+DF WRE WP + + E +T ++I +Y +
Sbjct: 138 QLGAQRIFELGLGDDDGNLEEDFITWREQFWPAVCEFFGVE------ATGEESSIRQYEL 191
Query: 266 MIH-----GPTVTSSVDNYSNMPNGNASFDIHHPCRVNVAVRRELHKPDSDRSCIHLEFD 320
++H T + + N FD +P V R+L++ ++R +HLE D
Sbjct: 192 VVHEDMDVAKVYTGEMGRLKSYENQKPPFDAKNPFLAAVTANRKLNQ-GTERHLMHLELD 250
Query: 321 VSGTGITYETGDHVGVYVENCDETVEEAGKXXXXXXXXXXXXHTDNEDGTPRGSSLTPPF 380
+S + I YE+GDHV VY N V + G+ + +E+ S+ PF
Sbjct: 251 ISDSKIRYESGDHVAVYPANDSALVNQIGEILGADLDVIMSLNNLDEE-----SNKKHPF 305
Query: 381 PGPCTLRTALARYADILNPPRKXXXXXXXXXXTEPSEAERLKFL--SSPQGKDDYSQWVV 438
P P T RTAL Y DI NPPR +EPSE E L + SS +GK+ Y WVV
Sbjct: 306 PCPTTYRTALTYYLDITNPPRTNVLYELAQYASEPSEQEHLHKMASSSGEGKELYLSWVV 365
Query: 439 ASQRSLLEVMAEFPSATPPIGVFFAAVAPHLQPRYYSISSSPRFAPDRVHVTCALVYGPT 498
++R +L ++ ++PS PPI + P LQ RYYSI+SS + P+ VH+ V
Sbjct: 366 EARRHILAILQDYPSLRPPID-HLCELLPRLQARYYSIASSSKVHPNSVHICAVAVEYEA 424
Query: 499 PTGRIHKGVCSTWMKNAIPLEGNGDCSWAPIFIRPSNFKLPANPSVPIIMVGPGTGLAPF 558
+GR++KGV ++W++ P NG + P+F+R S F+LP + P+IMVGPGTG+APF
Sbjct: 425 KSGRVNKGVATSWLRAKEPAGENGGRALVPMFVRKSQFRLPFKSTTPVIMVGPGTGIAPF 484
Query: 559 RGFLQERMALKQDGAQLGPALLFFGCR 585
GF+QER L++ G ++G LL++GCR
Sbjct: 485 MGFIQERAWLREQGKEVGETLLYYGCR 511
>pdb|1JA1|A Chain A, Cypor-Triple Mutant
pdb|1JA1|B Chain B, Cypor-Triple Mutant
Length = 622
Score = 349 bits (895), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 193/507 (38%), Positives = 283/507 (55%), Gaps = 26/507 (5%)
Query: 86 VTVFYGTQTGTAEGFAKALAEEIKARYEKAAVKVVDLDDYAMDDEQYEEKLKKETLAFFM 145
+ VFYG+QTGTAE FA L+++ RY + D ++Y + D ++ K +L F
Sbjct: 24 IIVFYGSQTGTAEEFANRLSKDAH-RYGMRGMSA-DPEEYDLADLSSLPEIDK-SLVVFC 80
Query: 146 VATYGDGEPTDNAARFYKWFTEGNDRGPWLQQLKFGVFGLGNRQYEHFNKIGIVLDEELC 205
+ATYG+G+PTDNA FY W E + L +KF VFGLGN+ YEHFN +G +D+ L
Sbjct: 81 MATYGEGDPTDNAQDFYDWLQETDVD---LTGVKFAVFGLGNKTYEHFNAMGKYVDQRLE 137
Query: 206 KQGGARLVPLGLGDDDQCIEDDFTAWRELVWPELDQLLRDEDDANTVSTPYTAAIPEYRV 265
+ G R+ LGLGDDD +E+DF WRE WP + + E +T ++I +Y +
Sbjct: 138 QLGAQRIFELGLGDDDGNLEEDFITWREQFWPAVCEFFGVE------ATGEESSIRQYEL 191
Query: 266 MIH-----GPTVTSSVDNYSNMPNGNASFDIHHPCRVNVAVRRELHKPDSDRSCIHLEFD 320
++H T + + N FD +P V R+L++ ++R +HLE D
Sbjct: 192 VVHEDMDVAKVYTGEMGRLKSYENQKPPFDAKNPFLAAVTANRKLNQ-GTERHLMHLELD 250
Query: 321 VSGTGITYETGDHVGVYVENCDETVEEAGKXXXXXXXXXXXXHTDNEDGTPRGSSLTPPF 380
+S + I YE+GDHV VY N V + G+ + +E+ S+ PF
Sbjct: 251 ISDSKIRYESGDHVAVYPANDSALVNQIGEILGADLDVIMSLNNLDEE-----SNKKHPF 305
Query: 381 PGPCTLRTALARYADILNPPRKXXXXXXXXXXTEPSEAERLKFL--SSPQGKDDYSQWVV 438
P P T RTAL Y DI NPPR +EPSE E L + SS +GK+ Y WVV
Sbjct: 306 PCPTTYRTALTYYLDITNPPRTNVLYELAQYASEPSEQEHLHKMASSSGEGKELYLSWVV 365
Query: 439 ASQRSLLEVMAEFPSATPPIGVFFAAVAPHLQPRYYSISSSPRFAPDRVHVTCALVYGPT 498
++R +L ++ ++PS PPI + P LQ RYY+I+SS + P+ VH+ V
Sbjct: 366 EARRHILAILQDYPSLRPPID-HLCELLPRLQARYYAIASSSKVHPNSVHICAVAVEYEA 424
Query: 499 PTGRIHKGVCSTWMKNAIPLEGNGDCSWAPIFIRPSNFKLPANPSVPIIMVGPGTGLAPF 558
+GR++KGV ++W++ P NG + P+F+R S F+LP + P+IMVGPGTG+APF
Sbjct: 425 KSGRVNKGVATSWLRAKEPAGENGGRALVPMFVRKSQFRLPFKSTTPVIMVGPGTGIAPF 484
Query: 559 RGFLQERMALKQDGAQLGPALLFFGCR 585
GF+QER L++ G ++G LL++GCR
Sbjct: 485 MGFIQERAWLREQGKEVGETLLYYGCR 511
>pdb|3ES9|A Chain A, Nadph-Cytochrome P450 Reductase In An Open Conformation
pdb|3ES9|B Chain B, Nadph-Cytochrome P450 Reductase In An Open Conformation
pdb|3ES9|C Chain C, Nadph-Cytochrome P450 Reductase In An Open Conformation
Length = 618
Score = 348 bits (892), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 193/507 (38%), Positives = 281/507 (55%), Gaps = 30/507 (5%)
Query: 86 VTVFYGTQTGTAEGFAKALAEEIKARYEKAAVKVVDLDDYAMDDEQYEEKLKKETLAFFM 145
+ VFYG+QTGTAE FA L+++ RY + D ++Y + D ++ K +L F
Sbjct: 24 IIVFYGSQTGTAEEFANRLSKDAH-RYGMRGMSA-DPEEYDLADLSSLPEIDK-SLVVFC 80
Query: 146 VATYGDGEPTDNAARFYKWFTEGNDRGPWLQQLKFGVFGLGNRQYEHFNKIGIVLDEELC 205
+ATYG+G+PTDNA FY W E + L +KF VFGLGN+ YEHFN +G +D+ L
Sbjct: 81 MATYGEGDPTDNAQDFYDWLQETDVD---LTGVKFAVFGLGNKTYEHFNAMGKYVDQRLE 137
Query: 206 KQGGARLVPLGLGDDDQCIEDDFTAWRELVWPELDQLLRDEDDANTVSTPYTAAIPEYRV 265
+ G R+ LGLGDDD +E+DF WRE WP + + E ++I +Y +
Sbjct: 138 QLGAQRIFELGLGDDDGNLEEDFITWREQFWPAVCEFFGVE----------ASSIRQYEL 187
Query: 266 MIH-----GPTVTSSVDNYSNMPNGNASFDIHHPCRVNVAVRRELHKPDSDRSCIHLEFD 320
++H T + + N FD +P V R+L++ ++R +HLE D
Sbjct: 188 VVHEDMDVAKVYTGEMGRLKSYENQKPPFDAKNPFLAAVTANRKLNQ-GTERHLMHLELD 246
Query: 321 VSGTGITYETGDHVGVYVENCDETVEEAGKXXXXXXXXXXXXHTDNEDGTPRGSSLTPPF 380
+S + I YE+GDHV VY N V + G+ + +E+ S+ PF
Sbjct: 247 ISDSKIRYESGDHVAVYPANDSALVNQIGEILGADLDVIMSLNNLDEE-----SNKKHPF 301
Query: 381 PGPCTLRTALARYADILNPPRKXXXXXXXXXXTEPSEAERLKFL--SSPQGKDDYSQWVV 438
P P T RTAL Y DI NPPR +EPSE E L + SS +GK+ Y WVV
Sbjct: 302 PCPTTYRTALTYYLDITNPPRTNVLYELAQYASEPSEQEHLHKMASSSGEGKELYLSWVV 361
Query: 439 ASQRSLLEVMAEFPSATPPIGVFFAAVAPHLQPRYYSISSSPRFAPDRVHVTCALVYGPT 498
++R +L ++ ++PS PPI + P LQ RYYSI+SS + P+ VH+ V
Sbjct: 362 EARRHILAILQDYPSLRPPID-HLCELLPRLQARYYSIASSSKVHPNSVHICAVAVEYEA 420
Query: 499 PTGRIHKGVCSTWMKNAIPLEGNGDCSWAPIFIRPSNFKLPANPSVPIIMVGPGTGLAPF 558
+GR++KGV ++W++ P NG + P+F+R S F+LP + P+IMVGPGTG+APF
Sbjct: 421 KSGRVNKGVATSWLRAKEPAGENGGRALVPMFVRKSQFRLPFKSTTPVIMVGPGTGIAPF 480
Query: 559 RGFLQERMALKQDGAQLGPALLFFGCR 585
GF+QER L++ G ++G LL++GCR
Sbjct: 481 MGFIQERAWLREQGKEVGETLLYYGCR 507
>pdb|3OJW|A Chain A, Disulfide Crosslinked Cytochrome P450 Reductase Inactive
pdb|3OJX|A Chain A, Disulfide Crosslinked Cytochrome P450 Reductase Inactive
Length = 622
Score = 343 bits (880), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 192/507 (37%), Positives = 281/507 (55%), Gaps = 26/507 (5%)
Query: 86 VTVFYGTQTGTAEGFAKALAEEIKARYEKAAVKVVDLDDYAMDDEQYEEKLKKETLAFFM 145
+ VFYG+QTGTAE FA L+++ RY + D ++Y + D ++ K +L F
Sbjct: 24 IIVFYGSQTGTAEEFANRLSKDAH-RYGMRGMSA-DPEEYDLADLSSLPEIDK-SLVVFA 80
Query: 146 VATYGDGEPTDNAARFYKWFTEGNDRGPWLQQLKFGVFGLGNRQYEHFNKIGIVLDEELC 205
+ATYG+G+PT NA FY W E + L +KF VFGLGN+ YEHFN +G +D+ L
Sbjct: 81 MATYGEGDPTCNAQDFYDWLQETDVD---LTGVKFAVFGLGNKTYEHFNAMGKYVDQRLE 137
Query: 206 KQGGARLVPLGLGDDDQCIEDDFTAWRELVWPELDQLLRDEDDANTVSTPYTAAIPEYRV 265
+ G R+ LGLGDDD +E+DF WRE WP + + E +T ++I +Y +
Sbjct: 138 QLGAQRIFELGLGDDDGNLEEDFITWREQFWPAVAEFFGVE------ATGEESSIRQYEL 191
Query: 266 MIH-----GPTVTSSVDNYSNMPNGNASFDIHHPCRVNVAVRRELHKPDSDRSCIHLEFD 320
++H T + + N FD +P V R+L++ ++R +HLE D
Sbjct: 192 VVHEDMDVAKVYTGEMGRLKSYENQKPPFDAKNPFLAAVTANRKLNQ-GTERHLMHLELD 250
Query: 321 VSGTGITYETGDHVGVYVENCDETVEEAGKXXXXXXXXXXXXHTDNEDGTPRGSSLTPPF 380
+S + I YE+GDHV VY N V + G+ + +E+ S+ PF
Sbjct: 251 ISDSKIRYESGDHVAVYPANDSALVNQIGEILGADLDVIMSLNNLDEE-----SNKKHPF 305
Query: 381 PGPCTLRTALARYADILNPPRKXXXXXXXXXXTEPSEAERLKFL--SSPQGKDDYSQWVV 438
P P T RTAL Y DI NPPR +EPSE E L + SS +GK+ Y WVV
Sbjct: 306 PTPTTYRTALTYYLDITNPPRTNVLYELAQYASEPSEQEHLHKMASSSGEGKELYLSWVV 365
Query: 439 ASQRSLLEVMAEFPSATPPIGVFFAAVAPHLQPRYYSISSSPRFAPDRVHVTCALVYGPT 498
++R +L ++ ++PS PPI + P LQ RYYSI+SS + P+ VH+T V
Sbjct: 366 EARRHILAILQDYPSLRPPIDHLLELL-PRLQARYYSIASSSKVHPNSVHITAVAVEYEA 424
Query: 499 PTGRIHKGVCSTWMKNAIPLEGNGDCSWAPIFIRPSNFKLPANPSVPIIMVGPGTGLAPF 558
+GR++KGV ++W++ P NG + P+F+ S F+LP + P+IMVGPGTG+APF
Sbjct: 425 KSGRVNKGVATSWLRAKEPAGENGGRALVPMFVCKSQFRLPFKSTTPVIMVGPGTGIAPF 484
Query: 559 RGFLQERMALKQDGAQLGPALLFFGCR 585
GF+QER L++ G ++G LL++G R
Sbjct: 485 MGFIQERAWLREQGKEVGETLLYYGAR 511
>pdb|3QFR|A Chain A, Crystal Structure Of Human Nadph-Cytochrome P450 Reductase
(R457h Mutant)
pdb|3QFR|B Chain B, Crystal Structure Of Human Nadph-Cytochrome P450 Reductase
(R457h Mutant)
Length = 618
Score = 343 bits (880), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 194/507 (38%), Positives = 279/507 (55%), Gaps = 26/507 (5%)
Query: 86 VTVFYGTQTGTAEGFAKALAEEIKARYEKAAVKVVDLDDYAMDDEQYEEKLKKETLAFFM 145
+ VFYG+QTGTAE FA L+++ RY + D ++Y + D ++ L F
Sbjct: 21 IIVFYGSQTGTAEEFANRLSKDAH-RYGMRGMSA-DPEEYDLADLSSLPEIDN-ALVVFC 77
Query: 146 VATYGDGEPTDNAARFYKWFTEGNDRGPWLQQLKFGVFGLGNRQYEHFNKIGIVLDEELC 205
+ATYG+G+PTDNA FY W E + L +KF VFGLGN+ YEHFN +G +D+ L
Sbjct: 78 MATYGEGDPTDNAQDFYDWLQETDVD---LSGVKFAVFGLGNKTYEHFNAMGKYVDKRLE 134
Query: 206 KQGGARLVPLGLGDDDQCIEDDFTAWRELVWPELDQLLRDEDDANTVSTPYTAAIPEYRV 265
+ G R+ LGLGDDD +E+DF WRE WP + + E +T ++I +Y +
Sbjct: 135 QLGAQRIFELGLGDDDGNLEEDFITWREQFWPAVCEHFGVE------ATGEESSIRQYEL 188
Query: 266 MIH-----GPTVTSSVDNYSNMPNGNASFDIHHPCRVNVAVRRELHKPDSDRSCIHLEFD 320
++H + + N FD +P V R+L++ ++R +HLE D
Sbjct: 189 VVHTDIDAAKVYMGEMGRLKSYENQKPPFDAKNPFLAAVTTNRKLNQ-GTERHLMHLELD 247
Query: 321 VSGTGITYETGDHVGVYVENCDETVEEAGKXXXXXXXXXXXXHTDNEDGTPRGSSLTPPF 380
+S + I YE+GDHV VY N V + GK + +E+ S+ PF
Sbjct: 248 ISDSKIRYESGDHVAVYPANDSALVNQLGKILGADLDVVMSLNNLDEE-----SNKKHPF 302
Query: 381 PGPCTLRTALARYADILNPPRKXXXXXXXXXXTEPSEAERLKFL--SSPQGKDDYSQWVV 438
P P + RTAL Y DI NPPR +EPSE E L+ + SS +GK+ Y WVV
Sbjct: 303 PCPTSYRTALTYYLDITNPPRTNVLYELAQYASEPSEQELLRKMASSSGEGKELYLSWVV 362
Query: 439 ASQRSLLEVMAEFPSATPPIGVFFAAVAPHLQPRYYSISSSPRFAPDRVHVTCALVYGPT 498
++R +L ++ + PS PPI + P LQ YYSI+SS + P+ VH+ +V T
Sbjct: 363 EARRHILAILQDCPSLRPPID-HLCELLPRLQAHYYSIASSSKVHPNSVHICAVVVEYET 421
Query: 499 PTGRIHKGVCSTWMKNAIPLEGNGDCSWAPIFIRPSNFKLPANPSVPIIMVGPGTGLAPF 558
GRI+KGV + W++ P NG + P+F+R S F+LP + P+IMVGPGTG+APF
Sbjct: 422 KAGRINKGVATNWLRAKEPAGENGGRALVPMFVRKSQFRLPFKATTPVIMVGPGTGVAPF 481
Query: 559 RGFLQERMALKQDGAQLGPALLFFGCR 585
GF+QER L+Q G ++G LL++GCR
Sbjct: 482 IGFIQERAWLRQQGKEVGETLLYYGCR 508
>pdb|3QE2|A Chain A, Crystal Structure Of Human Nadph-Cytochrome P450 Reductase
pdb|3QE2|B Chain B, Crystal Structure Of Human Nadph-Cytochrome P450 Reductase
Length = 618
Score = 343 bits (879), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 194/507 (38%), Positives = 280/507 (55%), Gaps = 26/507 (5%)
Query: 86 VTVFYGTQTGTAEGFAKALAEEIKARYEKAAVKVVDLDDYAMDDEQYEEKLKKETLAFFM 145
+ VFYG+QTGTAE FA L+++ RY + D ++Y + D ++ L F
Sbjct: 21 IIVFYGSQTGTAEEFANRLSKDAH-RYGMRGMSA-DPEEYDLADLSSLPEIDN-ALVVFC 77
Query: 146 VATYGDGEPTDNAARFYKWFTEGNDRGPWLQQLKFGVFGLGNRQYEHFNKIGIVLDEELC 205
+ATYG+G+PTDNA FY W E + L +KF VFGLGN+ YEHFN +G +D+ L
Sbjct: 78 MATYGEGDPTDNAQDFYDWLQETDVD---LSGVKFAVFGLGNKTYEHFNAMGKYVDKRLE 134
Query: 206 KQGGARLVPLGLGDDDQCIEDDFTAWRELVWPELDQLLRDEDDANTVSTPYTAAIPEYRV 265
+ G R+ LGLGDDD +E+DF WRE W + + E +T ++I +Y +
Sbjct: 135 QLGAQRIFELGLGDDDGNLEEDFITWREQFWLAVCEHFGVE------ATGEESSIRQYEL 188
Query: 266 MIH-----GPTVTSSVDNYSNMPNGNASFDIHHPCRVNVAVRRELHKPDSDRSCIHLEFD 320
++H + + N FD +P V R+L++ ++R +HLE D
Sbjct: 189 VVHTDIDAAKVYMGEMGRLKSYENQKPPFDAKNPFLAAVTTNRKLNQ-GTERHLMHLELD 247
Query: 321 VSGTGITYETGDHVGVYVENCDETVEEAGKXXXXXXXXXXXXHTDNEDGTPRGSSLTPPF 380
+S + I YE+GDHV VY N V + GK + +E+ S+ PF
Sbjct: 248 ISDSKIRYESGDHVAVYPANDSALVNQLGKILGADLDVVMSLNNLDEE-----SNKKHPF 302
Query: 381 PGPCTLRTALARYADILNPPRKXXXXXXXXXXTEPSEAERLKFL--SSPQGKDDYSQWVV 438
P P + RTAL Y DI NPPR +EPSE E L+ + SS +GK+ Y WVV
Sbjct: 303 PCPTSYRTALTYYLDITNPPRTNVLYELAQYASEPSEQELLRKMASSSGEGKELYLSWVV 362
Query: 439 ASQRSLLEVMAEFPSATPPIGVFFAAVAPHLQPRYYSISSSPRFAPDRVHVTCALVYGPT 498
++R +L ++ + PS PPI + P LQ RYYSI+SS + P+ VH+ +V T
Sbjct: 363 EARRHILAILQDCPSLRPPID-HLCELLPRLQARYYSIASSSKVHPNSVHICAVVVEYET 421
Query: 499 PTGRIHKGVCSTWMKNAIPLEGNGDCSWAPIFIRPSNFKLPANPSVPIIMVGPGTGLAPF 558
GRI+KGV + W++ P+ NG + P+F+R S F+LP + P+IMVGPGTG+APF
Sbjct: 422 KAGRINKGVATNWLRAKEPVGENGGRALVPMFVRKSQFRLPFKATTPVIMVGPGTGVAPF 481
Query: 559 RGFLQERMALKQDGAQLGPALLFFGCR 585
GF+QER L+Q G ++G LL++GCR
Sbjct: 482 IGFIQERAWLRQQGKEVGETLLYYGCR 508
>pdb|3QFC|A Chain A, Crystal Structure Of Human Nadph-Cytochrome P450 (V492e
Mutant)
pdb|3QFC|B Chain B, Crystal Structure Of Human Nadph-Cytochrome P450 (V492e
Mutant)
Length = 618
Score = 340 bits (872), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 193/507 (38%), Positives = 279/507 (55%), Gaps = 26/507 (5%)
Query: 86 VTVFYGTQTGTAEGFAKALAEEIKARYEKAAVKVVDLDDYAMDDEQYEEKLKKETLAFFM 145
+ VFYG+QTGTAE FA L+++ RY + D ++Y + D ++ L F
Sbjct: 21 IIVFYGSQTGTAEEFANRLSKDAH-RYGMRGMSA-DPEEYDLADLSSLPEIDN-ALVVFC 77
Query: 146 VATYGDGEPTDNAARFYKWFTEGNDRGPWLQQLKFGVFGLGNRQYEHFNKIGIVLDEELC 205
+ATYG+G+PTDNA FY W E + L +KF VFGLGN+ YEHFN +G +D+ L
Sbjct: 78 MATYGEGDPTDNAQDFYDWLQETDVD---LSGVKFAVFGLGNKTYEHFNAMGKYVDKRLE 134
Query: 206 KQGGARLVPLGLGDDDQCIEDDFTAWRELVWPELDQLLRDEDDANTVSTPYTAAIPEYRV 265
+ G R+ LGLGDDD +E+DF WRE W + + E +T ++I +Y +
Sbjct: 135 QLGAQRIFELGLGDDDGNLEEDFITWREQFWLAVCEHFGVE------ATGEESSIRQYEL 188
Query: 266 MIH-----GPTVTSSVDNYSNMPNGNASFDIHHPCRVNVAVRRELHKPDSDRSCIHLEFD 320
++H + + N FD +P V R+L++ ++R +HLE D
Sbjct: 189 VVHTDIDAAKVYMGEMGRLKSYENQKPPFDAKNPFLAAVTTNRKLNQ-GTERHLMHLELD 247
Query: 321 VSGTGITYETGDHVGVYVENCDETVEEAGKXXXXXXXXXXXXHTDNEDGTPRGSSLTPPF 380
+S + I YE+GDHV VY N V + GK + +E+ S+ PF
Sbjct: 248 ISDSKIRYESGDHVAVYPANDSALVNQLGKILGADLDVVMSLNNLDEE-----SNKKHPF 302
Query: 381 PGPCTLRTALARYADILNPPRKXXXXXXXXXXTEPSEAERLKFL--SSPQGKDDYSQWVV 438
P P + RTAL Y DI NPPR +EPSE E L+ + SS +GK+ Y WVV
Sbjct: 303 PCPTSYRTALTYYLDITNPPRTNVLYELAQYASEPSEQELLRKMASSSGEGKELYLSWVV 362
Query: 439 ASQRSLLEVMAEFPSATPPIGVFFAAVAPHLQPRYYSISSSPRFAPDRVHVTCALVYGPT 498
++R +L ++ + PS PPI + P LQ RYYSI+SS + P+ VH+ +V T
Sbjct: 363 EARRHILAILQDCPSLRPPID-HLCELLPRLQARYYSIASSSKVHPNSVHICAVVVEYET 421
Query: 499 PTGRIHKGVCSTWMKNAIPLEGNGDCSWAPIFIRPSNFKLPANPSVPIIMVGPGTGLAPF 558
GRI+KG + W++ P+ NG + P+F+R S F+LP + P+IMVGPGTG+APF
Sbjct: 422 KAGRINKGEATNWLRAKEPVGENGGRALVPMFVRKSQFRLPFKATTPVIMVGPGTGVAPF 481
Query: 559 RGFLQERMALKQDGAQLGPALLFFGCR 585
GF+QER L+Q G ++G LL++GCR
Sbjct: 482 IGFIQERAWLRQQGKEVGETLLYYGCR 508
>pdb|3FJO|A Chain A, Structure Of Chimeric Yh Cpr
Length = 637
Score = 298 bits (762), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 176/506 (34%), Positives = 264/506 (52%), Gaps = 29/506 (5%)
Query: 88 VFYGTQTGTAEGFAKALAEEIKARYEKAAVKVVDLDDYAMDDEQYEEKLKKETLAFFMVA 147
V Y +QTGTAE +AK ++E+ A++ V D+++Y +E + ++
Sbjct: 43 VLYASQTGTAEDYAKKFSKELVAKF-NLNVMCADVENY-----DFESLNDVPVIVSIFIS 96
Query: 148 TYGDGEPTDNAARFYKWFTEGNDRGPWLQQLKFGVFGLGNRQYEHFNKIGIVLDEELCKQ 207
TYG+G+ D A F + N L L++ +FGLGN YE FN ++ L
Sbjct: 97 TYGEGDFPDGAVNFEDFIC--NAEAGALSNLRYNMFGLGNSTYEFFNGAAKKAEKHLSAA 154
Query: 208 GGARLVPLGLGDDDQCIED-DFTAWRELVWPELDQLLRDEDDANTVSTPYTAAIPEYRVM 266
G RL LG DD D D+ AW++ + ++L+DE +T ++I +Y ++
Sbjct: 155 GAIRLGKLGEADDGAGTTDEDYMAWKDSIL----EVLKDE--LGVEATGEESSIRQYELV 208
Query: 267 IH-----GPTVTSSVDNYSNMPNGNASFDIHHPCRVNVAVRRELHKPDSDRSCIHLEFDV 321
+H + + N FD +P V R+L++ ++R +HLE D+
Sbjct: 209 VHTDIDAAKVYMGEMGRLKSYENQKPPFDAKNPFLAAVTTNRKLNQ-GTERHLMHLELDI 267
Query: 322 SGTGITYETGDHVGVYVENCDETVEEAGKXXXXXXXXXXXXHTDNEDGTPRGSSLTPPFP 381
S + I YE+GDHV VY N V + GK + +E+ S+ PFP
Sbjct: 268 SDSKIRYESGDHVAVYPANDSALVNQLGKILGADLDVVMSLNNLDEE-----SNKKHPFP 322
Query: 382 GPCTLRTALARYADILNPPRKXXXXXXXXXXTEPSEAERLKFL--SSPQGKDDYSQWVVA 439
P + RTAL Y DI NPPR +EPSE E L+ + SS +GK+ Y WVV
Sbjct: 323 CPTSYRTALTYYLDITNPPRTNVLYELAQYASEPSEQELLRKMASSSGEGKELYLSWVVE 382
Query: 440 SQRSLLEVMAEFPSATPPIGVFFAAVAPHLQPRYYSISSSPRFAPDRVHVTCALVYGPTP 499
++R +L ++ + PS PPI + P LQ RYYSI+SS + P+ VH+ +V T
Sbjct: 383 ARRHILAILQDCPSLRPPID-HLCELLPRLQARYYSIASSSKVHPNSVHICAVVVEYETK 441
Query: 500 TGRIHKGVCSTWMKNAIPLEGNGDCSWAPIFIRPSNFKLPANPSVPIIMVGPGTGLAPFR 559
GRI+KGV + W++ P NG + P+F+R S F+LP + P+IMVGPGTG+APF
Sbjct: 442 AGRINKGVATNWLRAKEPAGENGGRALVPMFVRKSQFRLPFKATTPVIMVGPGTGVAPFI 501
Query: 560 GFLQERMALKQDGAQLGPALLFFGCR 585
GF+QER L+Q G ++G LL++GCR
Sbjct: 502 GFIQERAWLRQQGKEVGETLLYYGCR 527
>pdb|3QFS|A Chain A, Crystal Structure Of Nadph-Cytochrome P450 Reductase
(FadNADPH Domain)
Length = 458
Score = 232 bits (591), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 125/334 (37%), Positives = 183/334 (54%), Gaps = 14/334 (4%)
Query: 259 AIPEYRVMIH-----GPTVTSSVDNYSNMPNGNASFDIHHPCRVNVAVRRELHKPDSDRS 313
+I +Y +++H + + N FD +P V R+L++ ++R
Sbjct: 22 SIRQYELVVHTDIDAAKVYMGEMGRLKSYENQKPPFDAKNPFLAAVTTNRKLNQ-GTERH 80
Query: 314 CIHLEFDVSGTGITYETGDHVGVYVENCDETVEEAGKXXXXXXXXXXXXHTDNEDGTPRG 373
+HLE D+S + I YE+GDHV VY N V + GK + +E+
Sbjct: 81 LMHLELDISDSKIRYESGDHVAVYPANDSALVNQLGKILGADLDVVMSLNNLDEE----- 135
Query: 374 SSLTPPFPGPCTLRTALARYADILNPPRKXXXXXXXXXXTEPSEAERLKFL--SSPQGKD 431
S+ PFP P + RTAL Y DI NPPR +EPSE E L+ + SS +GK+
Sbjct: 136 SNKKHPFPCPTSYRTALTYYLDITNPPRTNVLYELAQYASEPSEQELLRKMASSSGEGKE 195
Query: 432 DYSQWVVASQRSLLEVMAEFPSATPPIGVFFAAVAPHLQPRYYSISSSPRFAPDRVHVTC 491
Y WVV ++R +L ++ + PS PPI + P LQ RYYSI+SS + P+ VH+
Sbjct: 196 LYLSWVVEARRHILAILQDCPSLRPPID-HLCELLPRLQARYYSIASSSKVHPNSVHICA 254
Query: 492 ALVYGPTPTGRIHKGVCSTWMKNAIPLEGNGDCSWAPIFIRPSNFKLPANPSVPIIMVGP 551
+V T GRI+KGV + W++ P+ NG + P+F+R S F+LP + P+IMVGP
Sbjct: 255 VVVEYETKAGRINKGVATNWLRAKEPVGENGGRALVPMFVRKSQFRLPFKATTPVIMVGP 314
Query: 552 GTGLAPFRGFLQERMALKQDGAQLGPALLFFGCR 585
GTG+APF GF+QER L+Q G ++G LL++GCR
Sbjct: 315 GTGVAPFIGFIQERAWLRQQGKEVGETLLYYGCR 348
>pdb|3QFT|A Chain A, Crystal Structure Of Nadph-Cytochrome P450 Reductase
(FadNADPH DOMAIN And R457h Mutant)
Length = 458
Score = 229 bits (585), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 124/334 (37%), Positives = 182/334 (54%), Gaps = 14/334 (4%)
Query: 259 AIPEYRVMIH-----GPTVTSSVDNYSNMPNGNASFDIHHPCRVNVAVRRELHKPDSDRS 313
+I +Y +++H + + N FD +P V R+L++ ++R
Sbjct: 22 SIRQYELVVHTDIDAAKVYMGEMGRLKSYENQKPPFDAKNPFLAAVTTNRKLNQ-GTERH 80
Query: 314 CIHLEFDVSGTGITYETGDHVGVYVENCDETVEEAGKXXXXXXXXXXXXHTDNEDGTPRG 373
+HLE D+S + I YE+GDHV VY N V + GK + +E+
Sbjct: 81 LMHLELDISDSKIRYESGDHVAVYPANDSALVNQLGKILGADLDVVMSLNNLDEE----- 135
Query: 374 SSLTPPFPGPCTLRTALARYADILNPPRKXXXXXXXXXXTEPSEAERLKFL--SSPQGKD 431
S+ PFP P + RTAL Y DI NPPR +EPSE E L+ + SS +GK+
Sbjct: 136 SNKKHPFPCPTSYRTALTYYLDITNPPRTNVLYELAQYASEPSEQELLRKMASSSGEGKE 195
Query: 432 DYSQWVVASQRSLLEVMAEFPSATPPIGVFFAAVAPHLQPRYYSISSSPRFAPDRVHVTC 491
Y WVV ++R +L ++ + PS PPI + P LQ YYSI+SS + P+ VH+
Sbjct: 196 LYLSWVVEARRHILAILQDCPSLRPPID-HLCELLPRLQAHYYSIASSSKVHPNSVHICA 254
Query: 492 ALVYGPTPTGRIHKGVCSTWMKNAIPLEGNGDCSWAPIFIRPSNFKLPANPSVPIIMVGP 551
+V T GRI+KGV + W++ P+ NG + P+F+R S F+LP + P+IMVGP
Sbjct: 255 VVVEYETKAGRINKGVATNWLRAKEPVGENGGRALVPMFVRKSQFRLPFKATTPVIMVGP 314
Query: 552 GTGLAPFRGFLQERMALKQDGAQLGPALLFFGCR 585
GTG+APF GF+QER L+Q G ++G LL++GCR
Sbjct: 315 GTGVAPFIGFIQERAWLRQQGKEVGETLLYYGCR 348
>pdb|2BPO|A Chain A, Crystal Structure Of The Yeast Cpr Triple Mutant: D74g,
Y75f, K78a.
pdb|2BPO|B Chain B, Crystal Structure Of The Yeast Cpr Triple Mutant: D74g,
Y75f, K78a
Length = 682
Score = 209 bits (533), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 166/545 (30%), Positives = 248/545 (45%), Gaps = 71/545 (13%)
Query: 88 VFYGTQTGTAEGFAKALAEEIKARYEKAAVKVVDLDDYAMDDEQYEEKLKKETLAFFMVA 147
V Y +QTGTAEGFAKA ++E+ A++ V D+++Y +E + ++
Sbjct: 54 VLYASQTGTAEGFAKAFSKELVAKF-NLNVMCADVENY-----DFESLNDVPVIVSIFIS 107
Query: 148 TYGDGEPTDNAARFYKWFTEGNDRGPWLQQLKFGVFGLGNRQYEHFNKIGIVLDEELCKQ 207
TYG+G+ D A F + N L L++ +FGLGN YE FN ++ L
Sbjct: 108 TYGEGDFPDGAVNFEDFIC--NAEAGALSNLRYNMFGLGNSTYEFFNGAAKKAEKHLSAA 165
Query: 208 GGARLVPLGLGDDDQCIED-DFTAWRELVWPEL-DQLLRDEDDANTVSTPYTAAIPEYRV 265
G RL LG DD D D+ AW++ + L D+L DE +A S + E
Sbjct: 166 GAIRLGKLGEADDGAGTTDEDYMAWKDSILEVLKDELHLDEQEAKFTSQFQYTVLNE--- 222
Query: 266 MIHGPTVTSSVDNY--SNMPNGNAS------FDIHHPCRVNVAVRRELHKPDSDRSCIHL 317
+ ++ +Y S+ N NA FD+ P + REL + DR+CIH
Sbjct: 223 ITDSMSLGEPSAHYLPSHQLNRNADGIQLGPFDLSQPYIAPIVKSRELFSSN-DRNCIHS 281
Query: 318 EFDVSGTGITYETGDHVGVYVENCDETVEEAGKXXXXXXXXXXXXHTDNE---DGTPRGS 374
EFD+SG+ I Y TGDH+ V+ N E VE+ + D E D P
Sbjct: 282 EFDLSGSNIKYSTGDHLAVWPSNPLEKVEQ----------FLSIFNLDPETIFDLKPLDP 331
Query: 375 SLTPPFPGPCTLRTALARYADILNPPRKXXXXXXXXXXTEPSEAERLKFLSSPQGKDDYS 434
++ PFP P T+ A+ Y +I P + E+L LS + KD ++
Sbjct: 332 TVKVPFPTPTTIGAAIKHYLEITGPVSRQLFSSLIQFAPNADVKEKLTLLS--KDKDQFA 389
Query: 435 QWVVASQRSLLEVMAEFPSA----TPPIGVFFAAVAPHLQPRYYSISSSPRFAPDRVHVT 490
+ + ++ + + T P+ F P + PRYYSISSS VHVT
Sbjct: 390 VEITSKYFNIADALKYLSDGAKWDTVPMQ-FLVESVPQMTPRYYSISSSSLSEKQTVHVT 448
Query: 491 CALVYGPTPT---GRIHKGVCSTWMKNAIPLEGNGDCSWA-------------------- 527
+ P P GV + ++N + N + +
Sbjct: 449 SIVENFPNPELPDAPPVVGVTTNLLRNIQLAQNNVNIAETNLPVHYDLNGPRKLFANYKL 508
Query: 528 PIFIRPSNFKLPANPSVPIIMVGPGTGLAPFRGFLQERMALKQ------DGAQLGPALLF 581
P+ +R SNF+LP+NPS P+IM+GPGTG+APFRGF++ER+A + + LG +LF
Sbjct: 509 PVHVRRSNFRLPSNPSTPVIMIGPGTGVAPFRGFIRERVAFLESQKKGGNNVSLGKHILF 568
Query: 582 FGCRN 586
+G RN
Sbjct: 569 YGSRN 573
>pdb|1TLL|A Chain A, Crystal Structure Of Rat Neuronal Nitric-Oxide Synthase
Reductase Module At 2.3 A Resolution.
pdb|1TLL|B Chain B, Crystal Structure Of Rat Neuronal Nitric-Oxide Synthase
Reductase Module At 2.3 A Resolution
Length = 688
Score = 208 bits (529), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 171/566 (30%), Positives = 247/566 (43%), Gaps = 80/566 (14%)
Query: 83 KTKVTVFYGTQTGTAEGFAKALAEEIKARYEKAAVKVVDLDDYAMDDEQYE-EKLKKETL 141
+ K T+ Y T+TG ++ +AK L E K + D AM E+Y+ L+ E L
Sbjct: 11 RVKATILYATETGKSQAYAKTLCEIFKHAF----------DAKAMSMEEYDIVHLEHEAL 60
Query: 142 AFFMVATYGDGEPTDNAARF-------------------YK--------------WFTEG 168
+ +T+G+G+P +N +F YK +G
Sbjct: 61 VLVVTSTFGNGDPPENGEKFGCALMEMRHPNSVQEERKSYKVRFNSVSSYSDSRKSSGDG 120
Query: 169 ND-------RGPWLQQLKFGVFGLGNRQYEHFNKIGIVLDEELCKQGGARLVPLGLGDDD 221
D GP L ++F VFGLG+R Y HF G +D L + GG R++ + GD+
Sbjct: 121 PDLRDNFESTGP-LANVRFSVFGLGSRAYPHFCAFGHAVDTLLEELGGERILKMREGDEL 179
Query: 222 QCIEDDFTAWRELVWPELDQLLRDEDDANTVSTPYTAAIPEYRVMIHGPTVTSSVDNYSN 281
E+ F W + V+ + DD N + P + I R + V +
Sbjct: 180 CGQEEAFRTWAKKVFKAACDVFCVGDDVN-IEKPNNSLISNDRSWKRNKFRLTYVAEAPD 238
Query: 282 MPNGNASFDIHHPCRVNVA---VRRELHKPDSDRSCIHLEFDVSGTG-ITYETGDHVGVY 337
+ G ++ H RV+ A R+ L P S RS I + +G + Y+ GDH+GV+
Sbjct: 239 LTQGLSNV---HKKRVSAARLLSRQNLQSPKSSRSTIFVRLHTNGNQELQYQPGDHLGVF 295
Query: 338 VENCDETVE------EAGKXXXXXXXXXXXXHTDNEDGTPRGSSLTPPFPGPCTLRTALA 391
N ++ V E + G P PCT+ A
Sbjct: 296 PGNHEDLVNALIERLEDAPPANHVVKVEMLEERNTALGVISNWKDESRLP-PCTIFQAFK 354
Query: 392 RYADILNPPRKXXXXXXXXXXTEPSEAERLKFLSSPQGKDDYSQWVVASQRSLLEVMAEF 451
Y DI PP T E +RL LS +G +Y +W +++EV+ EF
Sbjct: 355 YYLDITTPPTPLQLQQFASLATNEKEKQRLLVLS--KGLQEYEEWKWGKNPTMVEVLEEF 412
Query: 452 PSATPPIGVFFAAVAPHLQPRYYSISSSPRFAPDRVHVTCALVYGPTPTGR--IHKGVCS 509
PS P LQPRYYSISSSP PD VH+T A+V T G +H GVCS
Sbjct: 413 PSIQMP-ATLLLTQLSLLQPRYYSISSSPDMYPDEVHLTVAIVSYHTRDGEGPVHHGVCS 471
Query: 510 TWMKNAIPLEGNGDCSWAPIFIRPS-NFKLPANPSVPIIMVGPGTGLAPFRGFLQER-MA 567
+W+ N I + P F+R + +F LP NP VP I+VGPGTG+APFR F Q+R
Sbjct: 472 SWL-NRIQAD-----DVVPCFVRGAPSFHLPRNPQVPCILVGPGTGIAPFRSFWQQRQFD 525
Query: 568 LKQDGAQLGPALLFFGCRNRRMVRIF 593
++ G P +L FGCR ++ I+
Sbjct: 526 IQHKGMNPCPMVLVFGCRQSKIDHIY 551
>pdb|2BF4|A Chain A, A Second Fmn-Binding Site In Yeast Nadph-Cytochrome P450
Reductase Suggests A Novel Mechanism Of Electron
Transfer By Diflavin Reductases.
pdb|2BF4|B Chain B, A Second Fmn-Binding Site In Yeast Nadph-Cytochrome P450
Reductase Suggests A Novel Mechanism Of Electron
Transfer By Diflavin Reductases.
pdb|2BN4|A Chain A, A Second Fmn-Binding Site In Yeast Nadph-Cytochrome P450
Reductase Suggests A Novel Mechanism Of Electron
Transfer By Diflavin Reductase
pdb|2BN4|B Chain B, A Second Fmn-Binding Site In Yeast Nadph-Cytochrome P450
Reductase Suggests A Novel Mechanism Of Electron
Transfer By Diflavin Reductase
Length = 682
Score = 204 bits (518), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 163/545 (29%), Positives = 246/545 (45%), Gaps = 71/545 (13%)
Query: 88 VFYGTQTGTAEGFAKALAEEIKARYEKAAVKVVDLDDYAMDDEQYEEKLKKETLAFFMVA 147
V Y +QTGTAE +AK ++E+ A++ V D+++Y +E + ++
Sbjct: 54 VLYASQTGTAEDYAKKFSKELVAKF-NLNVMCADVENY-----DFESLNDVPVIVSIFIS 107
Query: 148 TYGDGEPTDNAARFYKWFTEGNDRGPWLQQLKFGVFGLGNRQYEHFNKIGIVLDEELCKQ 207
TYG+G+ D A F + N L L++ +FGLGN YE FN ++ L
Sbjct: 108 TYGEGDFPDGAVNFEDFIC--NAEAGALSNLRYNMFGLGNSTYEFFNGAAKKAEKHLSAA 165
Query: 208 GGARLVPLGLGDDDQCIED-DFTAWRELVWPEL-DQLLRDEDDANTVSTPYTAAIPEYRV 265
G RL LG DD D D+ AW++ + L D+L DE +A S + E
Sbjct: 166 GAIRLGKLGEADDGAGTTDEDYMAWKDSILEVLKDELHLDEQEAKFTSQFQYTVLNE--- 222
Query: 266 MIHGPTVTSSVDNY--SNMPNGNAS------FDIHHPCRVNVAVRRELHKPDSDRSCIHL 317
+ ++ +Y S+ N NA FD+ P + REL + DR+CIH
Sbjct: 223 ITDSMSLGEPSAHYLPSHQLNRNADGIQLGPFDLSQPYIAPIVKSRELFSSN-DRNCIHS 281
Query: 318 EFDVSGTGITYETGDHVGVYVENCDETVEEAGKXXXXXXXXXXXXHTDNE---DGTPRGS 374
EFD+SG+ I Y TGDH+ V+ N E VE+ + D E D P
Sbjct: 282 EFDLSGSNIKYSTGDHLAVWPSNPLEKVEQ----------FLSIFNLDPETIFDLKPLDP 331
Query: 375 SLTPPFPGPCTLRTALARYADILNPPRKXXXXXXXXXXTEPSEAERLKFLSSPQGKDDYS 434
++ PFP P T+ A+ Y +I P + E+L LS + KD ++
Sbjct: 332 TVKVPFPTPTTIGAAIKHYLEITGPVSRQLFSSLIQFAPNADVKEKLTLLS--KDKDQFA 389
Query: 435 QWVVASQRSLLEVMAEFPSA----TPPIGVFFAAVAPHLQPRYYSISSSPRFAPDRVHVT 490
+ + ++ + + T P+ F P + PRYYSISSS VHVT
Sbjct: 390 VEITSKYFNIADALKYLSDGAKWDTVPMQ-FLVESVPQMTPRYYSISSSSLSEKQTVHVT 448
Query: 491 CALVYGPTPT---GRIHKGVCSTWMKNAIPLEGNGDCSWA-------------------- 527
+ P P GV + ++N + N + +
Sbjct: 449 SIVENFPNPELPDAPPVVGVTTNLLRNIQLAQNNVNIAETNLPVHYDLNGPRKLFANYKL 508
Query: 528 PIFIRPSNFKLPANPSVPIIMVGPGTGLAPFRGFLQERMALKQ------DGAQLGPALLF 581
P+ +R SNF+LP+NPS P+IM+GPGTG+APFRGF++ER+A + + LG +LF
Sbjct: 509 PVHVRRSNFRLPSNPSTPVIMIGPGTGVAPFRGFIRERVAFLESQKKGGNNVSLGKHILF 568
Query: 582 FGCRN 586
+G RN
Sbjct: 569 YGSRN 573
>pdb|1F20|A Chain A, Crystal Structure Of Rat Neuronal Nitric-Oxide Synthase
FadNADP+ Domain At 1.9a Resolution
Length = 435
Score = 152 bits (384), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 109/315 (34%), Positives = 147/315 (46%), Gaps = 24/315 (7%)
Query: 293 HPCRVNVA---VRRELHKPDSDRSCIHLEFDVSGTG-ITYETGDHVGVYVENCDETVE-- 346
H RV+ A R+ L P S RS I + +G + Y+ GDH+GV+ N ++ V
Sbjct: 26 HKKRVSAARLLSRQNLQSPKSSRSTIFVRLHTNGNQELQYQPGDHLGVFPGNHEDLVNAL 85
Query: 347 ----EAGKXXXXXXXXXXXXHTDNEDGTPRGSSLTPPFPGPCTLRTALARYADILNPPRK 402
E + G P PCT+ A Y DI PP
Sbjct: 86 IERLEDAPPANHVVKVEMLEERNTALGVISNWKDESRLP-PCTIFQAFKYYLDITTPPTP 144
Query: 403 XXXXXXXXXXTEPSEAERLKFLSSPQGKDDYSQWVVASQRSLLEVMAEFPSATPPIGVFF 462
T E +RL LS +G +Y +W +++EV+ EFPS P
Sbjct: 145 LQLQQFASLATNEKEKQRLLVLS--KGLQEYEEWKWGKNPTMVEVLEEFPSIQMP-ATLL 201
Query: 463 AAVAPHLQPRYYSISSSPRFAPDRVHVTCALVYGPTPTGR--IHKGVCSTWMKNAIPLEG 520
LQPRYYSISSSP PD VH+T A+V T G +H GVCS+W+ N I +
Sbjct: 202 LTQLSLLQPRYYSISSSPDMYPDEVHLTVAIVSYHTRDGEGPVHHGVCSSWL-NRIQAD- 259
Query: 521 NGDCSWAPIFIRPS-NFKLPANPSVPIIMVGPGTGLAPFRGFLQER-MALKQDGAQLGPA 578
P F+R + +F LP NP VP I+VGPGTG+APFR F Q+R ++ G P
Sbjct: 260 ----DVVPCFVRGAPSFHLPRNPQVPCILVGPGTGIAPFRSFWQQRQFDIQHKGMNPCPM 315
Query: 579 LLFFGCRNRRMVRIF 593
+L FGCR ++ I+
Sbjct: 316 VLVFGCRQSKIDHIY 330
>pdb|2QTZ|A Chain A, Crystal Structure Of The Nadp+-Bound Fad-Containing
Fnr-Like Module Of Human Methionine Synthase Reductase
Length = 539
Score = 142 bits (357), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 104/317 (32%), Positives = 156/317 (49%), Gaps = 21/317 (6%)
Query: 296 RVNVAVRRELHKPDSDRSCIHLEFDVSGTGITYETGDHVGVYVENCDETVEEA-GKXXXX 354
+V ++ +L D+ ++ + +E D+S T +Y+ GD V N D V+ +
Sbjct: 116 QVPISKAVQLTTNDAIKTTLLVELDISNTDFSYQPGDAFSVICPNSDSEVQSLLQRLQLE 175
Query: 355 XXXXXXXXHTDNEDGTPRGSSLTPPFPGPCTLRTALARYADILNPPRKXXXXXXXXXXTE 414
D +G++L P C+L+ +I P+K ++
Sbjct: 176 DKREHXVLLKIKADTKKKGATLPQHIPAGCSLQFIFTWCLEIRAIPKKAFLRALVDYTSD 235
Query: 415 PSEAERLKFLSSPQGKDDYSQWVVASQRSLLEVMAEFPSATPPIGVFFAAVAPHLQPRYY 474
+E RL+ L S QG DYS++V + LL+++ FPS PP+ + + P LQPR Y
Sbjct: 236 SAEKRRLQELCSKQGAADYSRFVRDAXACLLDLLLAFPSCQPPLSLLLEHL-PKLQPRPY 294
Query: 475 SISSSPRFAPDRVHVTCALV--YGPTPTGRIHKGVCSTWMKNAIP--LEGNGDCS----- 525
S +SS F P ++H +V T + KGVC+ W+ + L+ N S
Sbjct: 295 SCASSSLFHPGKLHFVFNIVEFLSTATTEVLRKGVCTGWLALLVASVLQPNIHASHEDSG 354
Query: 526 --WAP---IFIRPSN-FKLPANPSVPIIMVGPGTGLAPFRGFLQERMALKQ---DGAQLG 576
AP IF R +N F LP +PS+PIIMVGPGTG+APF GFLQ R L++ DG G
Sbjct: 355 KALAPKISIFPRTTNSFHLPDDPSIPIIMVGPGTGIAPFIGFLQHREKLQEQHPDG-NFG 413
Query: 577 PALLFFGCRNRRMVRIF 593
LFFGCR++ +F
Sbjct: 414 AMWLFFGCRHKDRDYLF 430
>pdb|4DQK|A Chain A, Crystal Structure Of The Fad Binding Domain Of Cytochrome
P450 Bm3
pdb|4DQK|B Chain B, Crystal Structure Of The Fad Binding Domain Of Cytochrome
P450 Bm3
Length = 391
Score = 141 bits (356), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 93/298 (31%), Positives = 139/298 (46%), Gaps = 19/298 (6%)
Query: 291 IHHPCRVNVAVRRELHKPDSDRSCIHLEFDVSGTGITYETGDHVGVYVENCDETVEEAGK 350
+H NV +EL +P S RS HLE ++ +Y+ GDH+GV N + V
Sbjct: 1 MHGAFSTNVVASKELQQPGSARSTRHLEIELPKEA-SYQEGDHLGVIPRNYEGIVNRVTA 59
Query: 351 XXXXXXXXXXXXHTDNEDGTPRGSSLTPPFPGPCTLRTA-LARYADILNPPRKXXXXXXX 409
+ E P T+ L +Y ++ +P +
Sbjct: 60 RFGLDASQQIRLEAEEEK--------LAHLPLAKTVSVEELLQYVELQDPVTRTQLRAMA 111
Query: 410 XXXTEPSEAERLKFLSSPQGKDDYSQWVVASQRSLLEVMAEFPSATPPIGVFFAAVAPHL 469
P L+ L Q Y + V+A + ++LE++ ++P+ F A + P +
Sbjct: 112 AKTVAPPHKVELEALLEKQA---YKEQVLAKRLTMLELLEKYPACEMKFSEFIALL-PSI 167
Query: 470 QPRYYSISSSPRFAPDRVHVTCALVYGPTPTGR-IHKGVCSTWMKNAIPLEGNGDCSWAP 528
+PRYYSISSSPR + +T ++V G +G +KG+ S ++ GD
Sbjct: 168 RPRYYSISSSPRVDEKQASITVSVVSGEAWSGYGEYKGIASNYLAEL----QEGDTITCF 223
Query: 529 IFIRPSNFKLPANPSVPIIMVGPGTGLAPFRGFLQERMALKQDGAQLGPALLFFGCRN 586
I S F LP +P P+IMVGPGTG+APFRGF+Q R LK+ G LG A L+FGCR+
Sbjct: 224 ISTPQSEFTLPKDPETPLIMVGPGTGVAPFRGFVQARKQLKEQGQSLGEAHLYFGCRS 281
>pdb|4DQL|A Chain A, Crystal Structure Of The Fad Binding Domain Of Cytochrome
P450 Bm3 In Complex With Nadp+
pdb|4DQL|B Chain B, Crystal Structure Of The Fad Binding Domain Of Cytochrome
P450 Bm3 In Complex With Nadp+
Length = 393
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 93/298 (31%), Positives = 139/298 (46%), Gaps = 19/298 (6%)
Query: 291 IHHPCRVNVAVRRELHKPDSDRSCIHLEFDVSGTGITYETGDHVGVYVENCDETVEEAGK 350
+H NV +EL +P S RS HLE ++ +Y+ GDH+GV N + V
Sbjct: 3 MHGAFSTNVVASKELQQPGSARSTRHLEIELPKEA-SYQEGDHLGVIPRNYEGIVNRVTA 61
Query: 351 XXXXXXXXXXXXHTDNEDGTPRGSSLTPPFPGPCTLRTA-LARYADILNPPRKXXXXXXX 409
+ E P T+ L +Y ++ +P +
Sbjct: 62 RFGLDASQQIRLEAEEEK--------LAHLPLAKTVSVEELLQYVELQDPVTRTQLRAMA 113
Query: 410 XXXTEPSEAERLKFLSSPQGKDDYSQWVVASQRSLLEVMAEFPSATPPIGVFFAAVAPHL 469
P L+ L Q Y + V+A + ++LE++ ++P+ F A + P +
Sbjct: 114 AKTVCPPHKVELEALLEKQA---YKEQVLAKRLTMLELLEKYPACEMKFSEFIALL-PSI 169
Query: 470 QPRYYSISSSPRFAPDRVHVTCALVYGPTPTGR-IHKGVCSTWMKNAIPLEGNGDCSWAP 528
+PRYYSISSSPR + +T ++V G +G +KG+ S ++ GD
Sbjct: 170 RPRYYSISSSPRVDEKQASITVSVVSGEAWSGYGEYKGIASNYLAEL----QEGDTITCF 225
Query: 529 IFIRPSNFKLPANPSVPIIMVGPGTGLAPFRGFLQERMALKQDGAQLGPALLFFGCRN 586
I S F LP +P P+IMVGPGTG+APFRGF+Q R LK+ G LG A L+FGCR+
Sbjct: 226 ISTPQSEFTLPKDPETPLIMVGPGTGVAPFRGFVQARKQLKEQGQSLGEAHLYFGCRS 283
>pdb|2QTL|A Chain A, Crystal Structure Of The Fad-Containing Fnr-Like Module Of
Human Methionine Synthase Reductase
Length = 539
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 103/317 (32%), Positives = 155/317 (48%), Gaps = 21/317 (6%)
Query: 296 RVNVAVRRELHKPDSDRSCIHLEFDVSGTGITYETGDHVGVYVENCDETVEEA-GKXXXX 354
+V ++ +L D+ ++ + +E D+S T +Y+ GD V N D V+ +
Sbjct: 116 QVPISKAVQLTTNDAIKTTLLVELDISNTDFSYQPGDAFSVICPNSDSEVQSLLQRLQLE 175
Query: 355 XXXXXXXXHTDNEDGTPRGSSLTPPFPGPCTLRTALARYADILNPPRKXXXXXXXXXXTE 414
D +G++L P +L+ +I P+K ++
Sbjct: 176 DKREHXVLLKIKADTKKKGATLPQHIPAGXSLQFIFTWCLEIRAIPKKAFLRALVDYTSD 235
Query: 415 PSEAERLKFLSSPQGKDDYSQWVVASQRSLLEVMAEFPSATPPIGVFFAAVAPHLQPRYY 474
+E RL+ L S QG DYS++V + LL+++ FPS PP+ + + P LQPR Y
Sbjct: 236 SAEKRRLQELCSKQGAADYSRFVRDAXACLLDLLLAFPSCQPPLSLLLEHL-PKLQPRPY 294
Query: 475 SISSSPRFAPDRVHVTCALV--YGPTPTGRIHKGVCSTWMKNAIP--LEGNGDCS----- 525
S +SS F P ++H +V T + KGVC+ W+ + L+ N S
Sbjct: 295 SCASSSLFHPGKLHFVFNIVEFLSTATTEVLRKGVCTGWLALLVASVLQPNIHASHEDSG 354
Query: 526 --WAP---IFIRPSN-FKLPANPSVPIIMVGPGTGLAPFRGFLQERMALKQ---DGAQLG 576
AP IF R +N F LP +PS+PIIMVGPGTG+APF GFLQ R L++ DG G
Sbjct: 355 KALAPKISIFPRTTNSFHLPDDPSIPIIMVGPGTGIAPFIGFLQHREKLQEQHPDG-NFG 413
Query: 577 PALLFFGCRNRRMVRIF 593
LFFGCR++ +F
Sbjct: 414 AMWLFFGCRHKDRDYLF 430
>pdb|1B1C|A Chain A, Crystal Structure Of The Fmn-Binding Domain Of Human
Cytochrome P450 Reductase At 1.93a Resolution
Length = 181
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 68/153 (44%), Positives = 92/153 (60%), Gaps = 6/153 (3%)
Query: 85 KVTVFYGTQTGTAEGFAKALAEEIKARYEKAAVKVVDLDDYAMDDEQYEEKLKKETLAFF 144
+ VFYG+QTGTAE FA L+++ RY + D ++Y + D ++ L F
Sbjct: 19 NIIVFYGSQTGTAEEFANRLSKDAH-RYGMRGMSA-DPEEYDLADLSSLPEIDN-ALVVF 75
Query: 145 MVATYGDGEPTDNAARFYKWFTEGNDRGPWLQQLKFGVFGLGNRQYEHFNKIGIVLDEEL 204
+ATYG+G+PTDNA FY W E + L +KF VFGLGN+ YEHFN +G +D+ L
Sbjct: 76 CMATYGEGDPTDNAQDFYDWLQETDVD---LSGVKFAVFGLGNKTYEHFNAMGKYVDKRL 132
Query: 205 CKQGGARLVPLGLGDDDQCIEDDFTAWRELVWP 237
+ G R+ LGLGDDD +E+DF WRE WP
Sbjct: 133 EQLGAQRIFELGLGDDDGNLEEDFITWREQFWP 165
>pdb|1DDG|A Chain A, Crystal Structure Of Sir-Fp60
pdb|1DDG|B Chain B, Crystal Structure Of Sir-Fp60
pdb|1DDI|A Chain A, Crystal Structure Of Sir-Fp60
Length = 374
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 52/131 (39%), Positives = 71/131 (54%), Gaps = 13/131 (9%)
Query: 469 LQPRYYSISSSPRFAPDRVHVTCALVYGPTPTGRIHKGVCSTWMKNAIPLEGNGDCSWAP 528
L PR YSI+SS + VHVT +V GR G S+++ + + EG
Sbjct: 158 LTPRLYSIASSQAEVENEVHVTVGVVRYDV-EGRARAGGASSFLADRVEEEGE-----VR 211
Query: 529 IFIRPS-NFKLPANPSVPIIMVGPGTGLAPFRGFLQERMALKQDGAQLGPALLFFGCRNR 587
+FI + NF+LPANP P+IM+GPGTG+APFR F+Q+R A + G LFFG N
Sbjct: 212 VFIEHNDNFRLPANPETPVIMIGPGTGIAPFRAFMQQRAADEAPGKN----WLFFG--NP 265
Query: 588 RMVRIFCYLLQ 598
F Y ++
Sbjct: 266 HFTEDFLYQVE 276
Score = 36.6 bits (83), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 33/54 (61%)
Query: 294 PCRVNVAVRRELHKPDSDRSCIHLEFDVSGTGITYETGDHVGVYVENCDETVEE 347
P +++V +++ +S++ H+E D+ +G+ Y+ GD +GV+ +N V+E
Sbjct: 11 PLVASLSVNQKITGRNSEKDVRHIEIDLGDSGLRYQPGDALGVWYQNDPALVKE 64
>pdb|1YKG|A Chain A, Solution Structure Of The Flavodoxin-Like Domain From The
Escherichia Coli Sulfite Reductase
Length = 167
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 74/150 (49%), Gaps = 12/150 (8%)
Query: 86 VTVFYGTQTGTAEGFAKALAEEIKARYEKAAVKVVDLDDYAMDDEQYEEKLKKETLAFFM 145
+T+ +QTG A A+AL +++ A K VK+V+ DY +++ E L +
Sbjct: 12 ITIISASQTGNARRVAEALRDDLLA--AKLNVKLVNAGDYKF------KQIASEKLLIVV 63
Query: 146 VATYGDGEPTDNAARFYKWFTEGNDRGPWLQQLKFGVFGLGNRQYEHFNKIGIVLDEELC 205
+T G+GEP + A +K+ + + P L+ F VF LG+ YE F + G D +L
Sbjct: 64 TSTQGEGEPPEEAVALHKFLF--SKKAPKLENTAFAVFSLGDTSYEFFCQSGKDFDSKLA 121
Query: 206 KQGGARLVPLGLGDDDQCIEDDFTAWRELV 235
+ GG RL L D D + + WR V
Sbjct: 122 ELGGERL--LDRVDADVEYQAAASEWRARV 149
>pdb|1BVY|F Chain F, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
Length = 191
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 86/180 (47%), Gaps = 18/180 (10%)
Query: 83 KTKVTVFYGTQTGTAEGFAKALAEEIKARYEKAAVKVVDLDDYAMDDEQYEEKLKKETLA 142
T + V YG+ GTAEG A+ LA+ A + A +V LD +A + L +E
Sbjct: 21 NTPLLVLYGSNMGTAEGTARDLAD--IAMSKGFAPQVATLDSHAGN-------LPREGAV 71
Query: 143 FFMVATYGDGEPTDNAARFYKWFTEGNDRGPWLQQLKFGVFGLGNRQYEH-FNKIGIVLD 201
+ A+Y +G P DNA +F W + + ++ +++ VFG G++ + + K+ +D
Sbjct: 72 LIVTASY-NGHPPDNAKQFVDWLDQAS--ADEVKGVRYSVFGCGDKNWATTYQKVPAFID 128
Query: 202 EELCKQGGARLVPLGLGDDDQCIEDDFTAWRELVWPELD-----QLLRDEDDANTVSTPY 256
E L +G + G D E + WRE +W ++ + ED+ +T+S +
Sbjct: 129 ETLAAKGAENIADRGEADASDDFEGTYEEWREHMWSDVAAYFNLDIENSEDNKSTLSLQF 188
>pdb|3HR4|A Chain A, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|C Chain C, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|E Chain E, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|G Chain G, Human Inos Reductase And Calmodulin Complex
Length = 219
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 77/153 (50%), Gaps = 20/153 (13%)
Query: 83 KTKVTVFYGTQTGTAEGFAKALAEEIKARYEKAAV-KVVDLDDYAMDDEQYEEKLKKETL 141
+ +VT+ + T+TG +E ALA ++ A + A KVV +D Y + L++E L
Sbjct: 40 RVRVTILFATETGKSE----ALAWDLGALFSCAFNPKVVCMDKYRLSC------LEEERL 89
Query: 142 AFFMVATYGDGEPTDNAARFYK---WFTEGNDRGPWLQQLKFGVFGLGNRQYEHFNKIGI 198
+ +T+G+G+ N + K E N++ ++ VFGLG+ Y F
Sbjct: 90 LLVVTSTFGNGDCPGNGEKLKKSLFMLKELNNK------FRYAVFGLGSSMYPRFCAFAH 143
Query: 199 VLDEELCKQGGARLVPLGLGDDDQCIEDDFTAW 231
+D++L G ++L P+G GD+ ED F +W
Sbjct: 144 DIDQKLSHLGASQLTPMGEGDELSGQEDAFRSW 176
>pdb|3MHP|A Chain A, Fnr-Recruitment To The Thylakoid
pdb|3MHP|B Chain B, Fnr-Recruitment To The Thylakoid
Length = 296
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 60/122 (49%), Gaps = 12/122 (9%)
Query: 467 PHLQPRYYSISSSP--RFAPDRVHVTCA--LVYGPTPTGRIHKGVCSTWMKNAIPLEGNG 522
PH + R YSI+SS F + C LVY G + KGVCS ++ + P G+
Sbjct: 70 PH-KLRLYSIASSAIGDFGDSKTVSLCVKRLVY-TNDAGEVVKGVCSNFLCDLKP--GSE 125
Query: 523 DCSWAPIFIRPSNFKLPANPSVPIIMVGPGTGLAPFRGFLQERMALKQDGAQL-GPALLF 581
P+ +P +P+ +IM+G GTG+APFR FL + K + Q G A LF
Sbjct: 126 VKITGPV---GKEMLMPKDPNATVIMLGTGTGIAPFRSFLWKMFFEKHEDYQFNGLAWLF 182
Query: 582 FG 583
G
Sbjct: 183 LG 184
>pdb|1QG0|A Chain A, Wild-type Pea Fnr
pdb|1QG0|B Chain B, Wild-type Pea Fnr
Length = 308
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 60/122 (49%), Gaps = 12/122 (9%)
Query: 467 PHLQPRYYSISSSP--RFAPDRVHVTCA--LVYGPTPTGRIHKGVCSTWMKNAIPLEGNG 522
PH + R YSI+SS F + C LVY G + KGVCS ++ + P G+
Sbjct: 83 PH-KLRLYSIASSAIGDFGDSKTVSLCVKRLVY-TNDAGEVVKGVCSNFLCDLKP--GSE 138
Query: 523 DCSWAPIFIRPSNFKLPANPSVPIIMVGPGTGLAPFRGFLQERMALKQDGAQL-GPALLF 581
P+ +P +P+ +IM+G GTG+APFR FL + K + Q G A LF
Sbjct: 139 VKITGPV---GKEMLMPKDPNATVIMLGTGTGIAPFRSFLWKMFFEKHEDYQFNGLAWLF 195
Query: 582 FG 583
G
Sbjct: 196 LG 197
>pdb|4AF7|A Chain A, Pea Fnr C266m Mutant
pdb|4AF7|B Chain B, Pea Fnr C266m Mutant
Length = 308
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 60/123 (48%), Gaps = 12/123 (9%)
Query: 467 PHLQPRYYSISSSP--RFAPDRVHVTCA--LVYGPTPTGRIHKGVCSTWMKNAIPLEGNG 522
PH + R YSI+SS F + C LVY G + KGVCS ++ + P G+
Sbjct: 83 PH-KLRLYSIASSAIGDFGDSKTVSLCVKRLVY-TNDAGEVVKGVCSNFLCDLKP--GSE 138
Query: 523 DCSWAPIFIRPSNFKLPANPSVPIIMVGPGTGLAPFRGFLQERMALKQDGAQL-GPALLF 581
P+ +P +P+ +IM+G GTG+APFR FL + K + Q G A LF
Sbjct: 139 VKITGPV---GKEMLMPKDPNATVIMLGTGTGIAPFRSFLWKMFFEKHEDYQFNGLAWLF 195
Query: 582 FGC 584
G
Sbjct: 196 LGV 198
>pdb|4AF6|A Chain A, Pea Fnr L268v Mutant
pdb|4AF6|B Chain B, Pea Fnr L268v Mutant
Length = 308
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 60/122 (49%), Gaps = 12/122 (9%)
Query: 467 PHLQPRYYSISSSP--RFAPDRVHVTCA--LVYGPTPTGRIHKGVCSTWMKNAIPLEGNG 522
PH + R YSI+SS F + C LVY G + KGVCS ++ + P G+
Sbjct: 83 PH-KLRLYSIASSAIGDFGDSKTVSLCVKRLVY-TNDAGEVVKGVCSNFLCDLKP--GSE 138
Query: 523 DCSWAPIFIRPSNFKLPANPSVPIIMVGPGTGLAPFRGFLQERMALKQDGAQL-GPALLF 581
P+ +P +P+ +IM+G GTG+APFR FL + K + Q G A LF
Sbjct: 139 VKITGPV---GKEMLMPKDPNATVIMLGTGTGIAPFRSFLWKMFFEKHEDYQFNGLAWLF 195
Query: 582 FG 583
G
Sbjct: 196 LG 197
>pdb|1QFY|A Chain A, Pea Fnr Y308s Mutant In Complex With Nadp+
pdb|1QFY|B Chain B, Pea Fnr Y308s Mutant In Complex With Nadp+
pdb|1QFZ|A Chain A, Pea Fnr Y308s Mutant In Complex With Nadph
pdb|1QFZ|B Chain B, Pea Fnr Y308s Mutant In Complex With Nadph
Length = 308
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 60/122 (49%), Gaps = 12/122 (9%)
Query: 467 PHLQPRYYSISSSP--RFAPDRVHVTCA--LVYGPTPTGRIHKGVCSTWMKNAIPLEGNG 522
PH + R YSI+SS F + C LVY G + KGVCS ++ + P G+
Sbjct: 83 PH-KLRLYSIASSAIGDFGDSKTVSLCVKRLVY-TNDAGEVVKGVCSNFLCDLKP--GSE 138
Query: 523 DCSWAPIFIRPSNFKLPANPSVPIIMVGPGTGLAPFRGFLQERMALKQDGAQL-GPALLF 581
P+ +P +P+ +IM+G GTG+APFR FL + K + Q G A LF
Sbjct: 139 VKITGPV---GKEMLMPKDPNATVIMLGTGTGIAPFRSFLWKMFFEKHEDYQFNGLAWLF 195
Query: 582 FG 583
G
Sbjct: 196 LG 197
>pdb|1QGA|A Chain A, Pea Fnr Y308w Mutant In Complex With Nadp+
pdb|1QGA|B Chain B, Pea Fnr Y308w Mutant In Complex With Nadp+
Length = 308
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 60/122 (49%), Gaps = 12/122 (9%)
Query: 467 PHLQPRYYSISSSP--RFAPDRVHVTCA--LVYGPTPTGRIHKGVCSTWMKNAIPLEGNG 522
PH + R YSI+SS F + C LVY G + KGVCS ++ + P G+
Sbjct: 83 PH-KLRLYSIASSAIGDFGDSKTVSLCVKRLVY-TNDAGEVVKGVCSNFLCDLKP--GSE 138
Query: 523 DCSWAPIFIRPSNFKLPANPSVPIIMVGPGTGLAPFRGFLQERMALKQDGAQL-GPALLF 581
P+ +P +P+ +IM+G GTG+APFR FL + K + Q G A LF
Sbjct: 139 VKITGPV---GKEMLMPKDPNATVIMLGTGTGIAPFRSFLWKMFFEKHEDYQFNGLAWLF 195
Query: 582 FG 583
G
Sbjct: 196 LG 197
>pdb|1GAQ|A Chain A, Crystal Structure Of The Complex Between Ferredoxin And
Ferredoxin-Nadp+ Reductase
pdb|1GAQ|C Chain C, Crystal Structure Of The Complex Between Ferredoxin And
Ferredoxin-Nadp+ Reductase
pdb|1GAW|A Chain A, Crystal Structure Analysis Of The Ferredoxin-Nadp+
Reductase From Maize Leaf
pdb|1GAW|B Chain B, Crystal Structure Analysis Of The Ferredoxin-Nadp+
Reductase From Maize Leaf
Length = 314
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 62/134 (46%), Gaps = 14/134 (10%)
Query: 458 IGVFFAAVAPHLQP---RYYSISSSP--RFAPDRVHVTCA--LVYGPTPTGRIHKGVCST 510
IGV V + +P R YSI+SS F + C L+Y G I KGVCS
Sbjct: 76 IGVIADGVDKNGKPHKVRLYSIASSAIGDFGDSKTVSLCVKRLIY-TNDAGEIVKGVCSN 134
Query: 511 WMKNAIPLEGNGDCSWAPIFIRPSNFKLPANPSVPIIMVGPGTGLAPFRGFLQERMALKQ 570
++ + P G+ P+ +P +P+ IIM+ GTG+APFR FL + K
Sbjct: 135 FLCDLQP--GDNVQITGPV---GKEMLMPKDPNATIIMLATGTGIAPFRSFLWKMFFEKH 189
Query: 571 DGAQL-GPALLFFG 583
D + G LF G
Sbjct: 190 DDYKFNGLGWLFLG 203
>pdb|1SM4|A Chain A, Crystal Structure Analysis Of The Ferredoxin-Nadp+
Reductase From Paprika
pdb|1SM4|B Chain B, Crystal Structure Analysis Of The Ferredoxin-Nadp+
Reductase From Paprika
Length = 296
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 62/134 (46%), Gaps = 14/134 (10%)
Query: 458 IGVFFAAVAPHLQP---RYYSISSSP--RFAPDRVHVTCA--LVYGPTPTGRIHKGVCST 510
IGV V + +P R YSI+SS F + C LVY G KGVCS
Sbjct: 58 IGVIADGVDANGKPHKLRLYSIASSALGDFGDSKTVSLCVKRLVY-TNDKGEEVKGVCSN 116
Query: 511 WMKNAIPLEGNGDCSWAPIFIRPSNFKLPANPSVPIIMVGPGTGLAPFRGFLQERMALKQ 570
++ + P G P+ +P +P+ +IM+G GTG+APFR FL + K
Sbjct: 117 FLCDLKP--GADVKITGPV---GKEMLMPKDPNATVIMLGTGTGIAPFRSFLWKMFFEKH 171
Query: 571 DGAQL-GPALLFFG 583
D + G A LF G
Sbjct: 172 DDYKFNGLAWLFLG 185
>pdb|3VO1|A Chain A, Crystal Structure Of Zea Mays Leaf Ferredoxin-Nadp+
Reductase Ii
pdb|3VO1|B Chain B, Crystal Structure Of Zea Mays Leaf Ferredoxin-Nadp+
Reductase Ii
Length = 314
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 57/122 (46%), Gaps = 12/122 (9%)
Query: 467 PHLQPRYYSISSSP--RFAPDRVHVTCA--LVYGPTPTGRIHKGVCSTWMKNAIPLEGNG 522
PH + R YSI+SS F + C LVY G + KGVCS ++ + P G
Sbjct: 89 PH-KLRLYSIASSALGDFGDSKTVSLCVKRLVY-TNDQGEVVKGVCSNFLCDLKP--GAE 144
Query: 523 DCSWAPIFIRPSNFKLPANPSVPIIMVGPGTGLAPFRGFLQER-MALKQDGAQLGPALLF 581
P+ +P +P+ IIM+ GTG+APFR FL + +D G A LF
Sbjct: 145 VKITGPV---GKEMLMPKDPNATIIMLATGTGIAPFRSFLWKMFFEEHEDYKYTGLAWLF 201
Query: 582 FG 583
G
Sbjct: 202 LG 203
>pdb|1FNB|A Chain A, Refined Crystal Structure Of Spinach Ferredoxin Reductase
At 1.7 Angstroms Resolution: Oxidized, Reduced, And 2'-
Phospho-5'-Amp Bound States
pdb|1FNC|A Chain A, Refined Crystal Structure Of Spinach Ferredoxin Reductase
At 1.7 Angstroms Resolution: Oxidized, Reduced, And 2'-
Phospho-5'-Amp Bound States
pdb|1FND|A Chain A, Refined Crystal Structure Of Spinach Ferredoxin Reductase
At 1.7 Angstroms Resolution: Oxidized, Reduced, And 2'-
Phospho-5'-Amp Bound States
Length = 314
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 58/122 (47%), Gaps = 12/122 (9%)
Query: 467 PHLQPRYYSISSSP--RFAPDRVHVTCA--LVYGPTPTGRIHKGVCSTWMKNAIPLEGNG 522
PH + R YSI+SS F + C L+Y G KGVCS ++ + P G
Sbjct: 89 PH-KLRLYSIASSALGDFGDAKSVSLCVKRLIY-TNDAGETIKGVCSNFLCDLKP--GAE 144
Query: 523 DCSWAPIFIRPSNFKLPANPSVPIIMVGPGTGLAPFRGFLQERMALKQDGAQL-GPALLF 581
P+ +P +P+ IIM+G GTG+APFR FL + K D + G A LF
Sbjct: 145 VKLTGPV---GKEMLMPKDPNATIIMLGTGTGIAPFRSFLWKMFFEKHDDYKFNGLAWLF 201
Query: 582 FG 583
G
Sbjct: 202 LG 203
>pdb|1BX0|A Chain A, Ferredoxin:nadp+ Oxidoreductase (Ferredoxin Reductase)
Mutant E312l
Length = 314
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 58/122 (47%), Gaps = 12/122 (9%)
Query: 467 PHLQPRYYSISSSP--RFAPDRVHVTCA--LVYGPTPTGRIHKGVCSTWMKNAIPLEGNG 522
PH + R YSI+SS F + C L+Y G KGVCS ++ + P G
Sbjct: 89 PH-KLRLYSIASSALGDFGDAKSVSLCVKRLIY-TNDAGETIKGVCSNFLCDLKP--GAE 144
Query: 523 DCSWAPIFIRPSNFKLPANPSVPIIMVGPGTGLAPFRGFLQERMALKQDGAQL-GPALLF 581
P+ +P +P+ IIM+G GTG+APFR FL + K D + G A LF
Sbjct: 145 VKLTGPV---GKEMLMPKDPNATIIMLGTGTGIAPFRSFLWKMFFEKHDDYKFNGLAWLF 201
Query: 582 FG 583
G
Sbjct: 202 LG 203
>pdb|3VO2|A Chain A, Crystal Structure Of Zea Mays Leaf Ferredoxin-Nadp+
Reductase Iii
pdb|3VO2|B Chain B, Crystal Structure Of Zea Mays Leaf Ferredoxin-Nadp+
Reductase Iii
Length = 310
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 58/122 (47%), Gaps = 12/122 (9%)
Query: 467 PHLQPRYYSISSSP--RFAPDRVHVTCA--LVYGPTPTGRIHKGVCSTWMKNAIPLEGNG 522
PH + R YSI+SS F + C LVY G I KGVCS ++ + P G
Sbjct: 85 PH-KLRLYSIASSALGDFGDSKTVSLCVKRLVY-TNDQGEIVKGVCSNFLCDLKP--GAD 140
Query: 523 DCSWAPIFIRPSNFKLPANPSVPIIMVGPGTGLAPFRGFLQERMALKQDGAQL-GPALLF 581
P+ +P +P+ +IM+ GTG+APFR FL + + + + G A LF
Sbjct: 141 VKITGPV---GKEMLMPKDPNATVIMLATGTGIAPFRSFLWKMFLEEHEDYKFSGLAWLF 197
Query: 582 FG 583
G
Sbjct: 198 LG 199
>pdb|1FRQ|A Chain A, Ferredoxin:nadp+ Oxidoreductase (Ferredoxin Reductase)
Mutant E312a
Length = 314
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 58/122 (47%), Gaps = 12/122 (9%)
Query: 467 PHLQPRYYSISSSP--RFAPDRVHVTCA--LVYGPTPTGRIHKGVCSTWMKNAIPLEGNG 522
PH + R YSI+SS F + C L+Y G KGVCS ++ + P G
Sbjct: 89 PH-KLRLYSIASSALGDFGDAKSVSLCVKRLIY-TNDAGETIKGVCSNFLCDLKP--GAE 144
Query: 523 DCSWAPIFIRPSNFKLPANPSVPIIMVGPGTGLAPFRGFLQERMALKQDGAQL-GPALLF 581
P+ +P +P+ IIM+G GTG+APFR FL + K D + G A LF
Sbjct: 145 VKLTGPV---GKEMLMPKDPNATIIMLGTGTGIAPFRSFLWKMFFEKHDDYKFNGLAWLF 201
Query: 582 FG 583
G
Sbjct: 202 LG 203
>pdb|1BX1|A Chain A, Ferredoxin:nadp+ Oxidoreductase (Ferredoxin Reductase)
Mutant E312q
Length = 314
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 58/122 (47%), Gaps = 12/122 (9%)
Query: 467 PHLQPRYYSISSSP--RFAPDRVHVTCA--LVYGPTPTGRIHKGVCSTWMKNAIPLEGNG 522
PH + R YSI+SS F + C L+Y G KGVCS ++ + P G
Sbjct: 89 PH-KLRLYSIASSALGDFGDAKSVSLCVKRLIY-TNDAGETIKGVCSNFLCDLKP--GAE 144
Query: 523 DCSWAPIFIRPSNFKLPANPSVPIIMVGPGTGLAPFRGFLQERMALKQDGAQL-GPALLF 581
P+ +P +P+ IIM+G GTG+APFR FL + K D + G A LF
Sbjct: 145 VKLTGPV---GKEMLMPKDPNATIIMLGTGTGIAPFRSFLWKMFFEKHDDYKFNGLAWLF 201
Query: 582 FG 583
G
Sbjct: 202 LG 203
>pdb|1FRN|A Chain A, The Involvement Of Ser96 In The Catalytic Mechanism Of
Ferredoxin-Nadp+ Reductase: Structure-Function
Relationship As Studied By Site-Directed Mutagenesis And
X- Ray Crystallography
Length = 314
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 57/122 (46%), Gaps = 12/122 (9%)
Query: 467 PHLQPRYYSISSSP--RFAPDRVHVTCA--LVYGPTPTGRIHKGVCSTWMKNAIPLEGNG 522
PH + R Y I+SS F + C L+Y G KGVCS ++ + P G
Sbjct: 89 PH-KLRLYVIASSALGDFGDAKSVSLCVKRLIY-TNDAGETIKGVCSNFLCDLKP--GAE 144
Query: 523 DCSWAPIFIRPSNFKLPANPSVPIIMVGPGTGLAPFRGFLQERMALKQDGAQL-GPALLF 581
P+ +P +P+ IIM+G GTG+APFR FL + K D + G A LF
Sbjct: 145 VKLTGPV---GKEMLMPKDPNATIIMLGTGTGIAPFRSFLWKMFFEKHDDYKFNGLAWLF 201
Query: 582 FG 583
G
Sbjct: 202 LG 203
>pdb|2XNC|A Chain A, Crystal Structure Of An Engineered Ferredoxin Nadp
Reductase (Fnr) From Pisum Sativum
pdb|2XNC|B Chain B, Crystal Structure Of An Engineered Ferredoxin Nadp
Reductase (Fnr) From Pisum Sativum
Length = 315
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 56/120 (46%), Gaps = 17/120 (14%)
Query: 467 PHLQPRYYSISSSP--RFAPDRVHVTCALVYGPTPTGRIHKGVCSTWMKNAIPLEGNGDC 524
PH + R YSI+SS F + C R+ GVCS ++ + P G+
Sbjct: 98 PH-KLRLYSIASSAIGDFGDSKTVSLC--------VKRVPDGVCSNFLCDLKP--GSEVK 146
Query: 525 SWAPIFIRPSNFKLPANPSVPIIMVGPGTGLAPFRGFLQERMALKQDGAQL-GPALLFFG 583
P+ +P +P+ +IM+G GTG+APFR FL + K + Q G A LF G
Sbjct: 147 ITGPV---GKEMLMPKDPNATVIMLGTGTGIAPFRSFLWKMFFEKHEDYQFNGLAWLFLG 203
>pdb|2HNA|A Chain A, Solution Structure Of A Bacterial Apo-Flavodoxin
pdb|2HNB|A Chain A, Solution Structure Of A Bacterial Holo-Flavodoxin
Length = 147
Score = 45.1 bits (105), Expect = 1e-04, Method: Composition-based stats.
Identities = 37/126 (29%), Positives = 62/126 (49%), Gaps = 14/126 (11%)
Query: 86 VTVFYGTQTGTAEGFAKALAEEIKARYEKAAVKVVDLDDYAMDDEQYEEKLKKETLAFFM 145
+T+ G+ G AE A+ LAE++ E+A L ++D L + +
Sbjct: 4 ITLISGSTLGGAEYVAEHLAEKL----EEAGFTTETLHGPLLED------LPASGIWLVI 53
Query: 146 VATYGDGEPTDNAARFYKWFTEGNDRGPWLQQLKFGVFGLGNRQYEHFNKIGIVLDEELC 205
+T+G G+ DN + FY+ E + P L ++FG G+G+R+Y+ F L+ EL
Sbjct: 54 SSTHGAGDIPDNLSPFYEALQE---QKPDLSAVRFGAIGIGSREYDTFCGAIDKLEAEL- 109
Query: 206 KQGGAR 211
K GA+
Sbjct: 110 KNSGAK 115
>pdb|2B5O|A Chain A, Ferredoxin-nadp Reductase
pdb|2B5O|B Chain B, Ferredoxin-nadp Reductase
Length = 402
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 56/123 (45%), Gaps = 10/123 (8%)
Query: 467 PHLQPRYYSISSSPR--FAPDRVHVTCA--LVYGPTPTGRIHKGVCSTWMKNAIPLEGNG 522
PH + R YSI+S+ ++ C L Y +G GVCST++ N +P+ +
Sbjct: 175 PH-KLRLYSIASTRHGDMEDNKTVSLCVRQLEYQDPESGETVYGVCSTYLCN-LPVGTDD 232
Query: 523 DCSWAPIFIRPSNFKLPANPSVPIIMVGPGTGLAPFRGFLQERMALKQDGAQL-GPALLF 581
P+ LP + ++M+ GTG+APFR FL + + + G A L
Sbjct: 233 VKITGPV---GKEMLLPDDEDATVVMLATGTGIAPFRAFLWRMFKEQHEDYKFKGKAWLI 289
Query: 582 FGC 584
FG
Sbjct: 290 FGV 292
>pdb|1E64|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Lys 75 Replaced By
Gln (K75q)
Length = 304
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 46/98 (46%), Gaps = 11/98 (11%)
Query: 470 QPRYYSISSSPRFAPDRVHVTCALV-----YGPTPTGRIHKGVCSTWMKNAIPLEGNGDC 524
Q R YSI+S+ R D T +L Y +G GVCST++ + P G+
Sbjct: 76 QLRLYSIAST-RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEP--GSEVK 132
Query: 525 SWAPIFIRPSNFKLPANPSVPIIMVGPGTGLAPFRGFL 562
P+ LP +P +IM+ GTG+AP R +L
Sbjct: 133 ITGPV---GKEMLLPDDPEANVIMLATGTGIAPMRTYL 167
>pdb|1GO2|A Chain A, Structure Of Ferredoxin-nadp+ Reductase With Lys 72
Replaced By Glu (k72e)
Length = 304
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 52/113 (46%), Gaps = 14/113 (12%)
Query: 458 IGVFFAAVAPHLQP---RYYSISSSPRFAPDRVHVTCALV-----YGPTPTGRIHKGVCS 509
IG+ V + +P R YSI+S+ R D T +L Y +G GVCS
Sbjct: 61 IGIIPPGVDKNGEPEKLRLYSIAST-RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCS 119
Query: 510 TWMKNAIPLEGNGDCSWAPIFIRPSNFKLPANPSVPIIMVGPGTGLAPFRGFL 562
T++ + P G+ P+ LP +P +IM+ GTG+AP R +L
Sbjct: 120 TYLTHIEP--GSEVKITGPV---GKEMLLPDDPEANVIMLATGTGIAPMRTYL 167
>pdb|1EWY|A Chain A, Anabaena Pcc7119 Ferredoxin:ferredoxin-Nadp+-Reductase
Complex
pdb|1EWY|B Chain B, Anabaena Pcc7119 Ferredoxin:ferredoxin-Nadp+-Reductase
Complex
Length = 303
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 52/113 (46%), Gaps = 14/113 (12%)
Query: 458 IGVFFAAVAPHLQP---RYYSISSSPRFAPDRVHVTCALV-----YGPTPTGRIHKGVCS 509
IG+ V + +P R YSI+S+ R D T +L Y +G GVCS
Sbjct: 60 IGIIPPGVDKNGKPEKLRLYSIAST-RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCS 118
Query: 510 TWMKNAIPLEGNGDCSWAPIFIRPSNFKLPANPSVPIIMVGPGTGLAPFRGFL 562
T++ + P G+ P+ LP +P +IM+ GTG+AP R +L
Sbjct: 119 TYLTHIEP--GSEVKITGPV---GKEMLLPDDPEANVIMLATGTGIAPMRTYL 166
>pdb|1QUF|A Chain A, X-Ray Structure Of A Complex Nadp+-Ferredoxin:nadp+
Reductase From The Cyanobacterium Anabaena Pcc 7119 At
2.25 Angstroms
Length = 304
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 52/113 (46%), Gaps = 14/113 (12%)
Query: 458 IGVFFAAVAPHLQP---RYYSISSSPRFAPDRVHVTCALV-----YGPTPTGRIHKGVCS 509
IG+ V + +P R YSI+S+ R D T +L Y +G GVCS
Sbjct: 61 IGIIPPGVDKNGKPEKLRLYSIAST-RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCS 119
Query: 510 TWMKNAIPLEGNGDCSWAPIFIRPSNFKLPANPSVPIIMVGPGTGLAPFRGFL 562
T++ + P G+ P+ LP +P +IM+ GTG+AP R +L
Sbjct: 120 TYLTHIEP--GSEVKITGPV---GKEMLLPDDPEANVIMLATGTGIAPMRTYL 167
>pdb|1QUE|A Chain A, X-Ray Structure Of The Ferredoxin:nadp+ Reductase From The
Cyanobacterium Anabaena Pcc 7119 At 1.8 Angstroms
Length = 303
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 52/113 (46%), Gaps = 14/113 (12%)
Query: 458 IGVFFAAVAPHLQP---RYYSISSSPRFAPDRVHVTCALV-----YGPTPTGRIHKGVCS 509
IG+ V + +P R YSI+S+ R D T +L Y +G GVCS
Sbjct: 60 IGIIPPGVDKNGKPEKLRLYSIAST-RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCS 118
Query: 510 TWMKNAIPLEGNGDCSWAPIFIRPSNFKLPANPSVPIIMVGPGTGLAPFRGFL 562
T++ + P G+ P+ LP +P +IM+ GTG+AP R +L
Sbjct: 119 TYLTHIEP--GSEVKITGPV---GKEMLLPDDPEANVIMLATGTGIAPMRTYL 166
>pdb|1W34|A Chain A, Ferredoxin-Nadp Reductase (Mutation: Y 303 S)
Length = 304
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 52/113 (46%), Gaps = 14/113 (12%)
Query: 458 IGVFFAAVAPHLQP---RYYSISSSPRFAPDRVHVTCALV-----YGPTPTGRIHKGVCS 509
IG+ V + +P R YSI+S+ R D T +L Y +G GVCS
Sbjct: 61 IGIIPPGVDKNGKPEKLRLYSIAST-RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCS 119
Query: 510 TWMKNAIPLEGNGDCSWAPIFIRPSNFKLPANPSVPIIMVGPGTGLAPFRGFL 562
T++ + P G+ P+ LP +P +IM+ GTG+AP R +L
Sbjct: 120 TYLTHIEP--GSEVKITGPV---GKEMLLPDDPEANVIMLATGTGIAPMRTYL 167
>pdb|1GR1|A Chain A, Structure Of Ferredoxin-Nadp+ Reductase With Glu 139
Replaced By Lys (E139k)
Length = 303
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 52/113 (46%), Gaps = 14/113 (12%)
Query: 458 IGVFFAAVAPHLQP---RYYSISSSPRFAPDRVHVTCALV-----YGPTPTGRIHKGVCS 509
IG+ V + +P R YSI+S+ R D T +L Y +G GVCS
Sbjct: 60 IGIIPPGVDKNGKPEKLRLYSIAST-RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCS 118
Query: 510 TWMKNAIPLEGNGDCSWAPIFIRPSNFKLPANPSVPIIMVGPGTGLAPFRGFL 562
T++ + P G+ P+ LP +P +IM+ GTG+AP R +L
Sbjct: 119 TYLTHIEP--GSEVKITGPV---GKKMLLPDDPEANVIMLATGTGIAPMRTYL 166
>pdb|2X3U|A Chain A, Ferredoxin-Nadp Reductase Mutant With Tyr 303 Replaced By
Phe (Y303f)
Length = 303
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 52/113 (46%), Gaps = 14/113 (12%)
Query: 458 IGVFFAAVAPHLQP---RYYSISSSPRFAPDRVHVTCALV-----YGPTPTGRIHKGVCS 509
IG+ V + +P R YSI+S+ R D T +L Y +G GVCS
Sbjct: 60 IGIIPPGVDKNGKPEKLRLYSIAST-RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCS 118
Query: 510 TWMKNAIPLEGNGDCSWAPIFIRPSNFKLPANPSVPIIMVGPGTGLAPFRGFL 562
T++ + P G+ P+ LP +P +IM+ GTG+AP R +L
Sbjct: 119 TYLTHIEP--GSEVKITGPV---GKEMLLPDDPEANVIMLATGTGIAPMRTYL 166
>pdb|1E62|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Lys 75 Replaced By
Arg (K75r)
Length = 304
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 52/113 (46%), Gaps = 14/113 (12%)
Query: 458 IGVFFAAVAPHLQP---RYYSISSSPRFAPDRVHVTCALV-----YGPTPTGRIHKGVCS 509
IG+ V + +P R YSI+S+ R D T +L Y +G GVCS
Sbjct: 61 IGIIPPGVDKNGKPERLRLYSIAST-RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCS 119
Query: 510 TWMKNAIPLEGNGDCSWAPIFIRPSNFKLPANPSVPIIMVGPGTGLAPFRGFL 562
T++ + P G+ P+ LP +P +IM+ GTG+AP R +L
Sbjct: 120 TYLTHIEP--GSEVKITGPV---GKEMLLPDDPEANVIMLATGTGIAPMRTYL 167
>pdb|1BJK|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Arg 264 Replaced By
Glu (r264e)
Length = 295
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 52/113 (46%), Gaps = 14/113 (12%)
Query: 458 IGVFFAAVAPHLQP---RYYSISSSPRFAPDRVHVTCALV-----YGPTPTGRIHKGVCS 509
IG+ V + +P R YSI+S+ R D T +L Y +G GVCS
Sbjct: 52 IGIIPPGVDKNGKPEKLRLYSIAST-RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCS 110
Query: 510 TWMKNAIPLEGNGDCSWAPIFIRPSNFKLPANPSVPIIMVGPGTGLAPFRGFL 562
T++ + P G+ P+ LP +P +IM+ GTG+AP R +L
Sbjct: 111 TYLTHIEP--GSEVKITGPV---GKEMLLPDDPEANVIMLATGTGIAPMRTYL 158
>pdb|1QGY|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Lys 75 Replaced By
Glu (K75e)
Length = 295
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 52/113 (46%), Gaps = 14/113 (12%)
Query: 458 IGVFFAAVAPHLQP---RYYSISSSPRFAPDRVHVTCALV-----YGPTPTGRIHKGVCS 509
IG+ V + +P R YSI+S+ R D T +L Y +G GVCS
Sbjct: 52 IGIIPPGVDKNGKPEELRLYSIAST-RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCS 110
Query: 510 TWMKNAIPLEGNGDCSWAPIFIRPSNFKLPANPSVPIIMVGPGTGLAPFRGFL 562
T++ + P G+ P+ LP +P +IM+ GTG+AP R +L
Sbjct: 111 TYLTHIEP--GSEVKITGPV---GKEMLLPDDPEANVIMLATGTGIAPMRTYL 158
>pdb|1E63|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Lys 75 Replaced By
Ser (K75s)
Length = 304
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 52/113 (46%), Gaps = 14/113 (12%)
Query: 458 IGVFFAAVAPHLQP---RYYSISSSPRFAPDRVHVTCALV-----YGPTPTGRIHKGVCS 509
IG+ V + +P R YSI+S+ R D T +L Y +G GVCS
Sbjct: 61 IGIIPPGVDKNGKPESLRLYSIAST-RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCS 119
Query: 510 TWMKNAIPLEGNGDCSWAPIFIRPSNFKLPANPSVPIIMVGPGTGLAPFRGFL 562
T++ + P G+ P+ LP +P +IM+ GTG+AP R +L
Sbjct: 120 TYLTHIEP--GSEVKITGPV---GKEMLLPDDPEANVIMLATGTGIAPMRTYL 167
>pdb|1GJR|A Chain A, Ferredoxin-Nadp+ Reductase Complexed With Nadp+ By
Cocrystallization
Length = 304
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 52/113 (46%), Gaps = 14/113 (12%)
Query: 458 IGVFFAAVAPHLQP---RYYSISSSPRFAPDRVHVTCALV-----YGPTPTGRIHKGVCS 509
IG+ V + +P R YSI+S+ R D T +L Y +G GVCS
Sbjct: 61 IGIIPPGVDKNGKPEKLRLYSIAST-RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCS 119
Query: 510 TWMKNAIPLEGNGDCSWAPIFIRPSNFKLPANPSVPIIMVGPGTGLAPFRGFL 562
T++ + P G+ P+ LP +P +IM+ GTG+AP R +L
Sbjct: 120 TYLTHIEP--GSEVKITGPV---GKEMLLPDDPEANVIMLATGTGIAPMRTYL 167
>pdb|1B2R|A Chain A, Ferredoxin-Nadp+ Reductase (Mutation: E 301 A)
Length = 304
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 52/113 (46%), Gaps = 14/113 (12%)
Query: 458 IGVFFAAVAPHLQP---RYYSISSSPRFAPDRVHVTCALV-----YGPTPTGRIHKGVCS 509
IG+ V + +P R YSI+S+ R D T +L Y +G GVCS
Sbjct: 61 IGIIPPGVDKNGKPEKLRLYSIAST-RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCS 119
Query: 510 TWMKNAIPLEGNGDCSWAPIFIRPSNFKLPANPSVPIIMVGPGTGLAPFRGFL 562
T++ + P G+ P+ LP +P +IM+ GTG+AP R +L
Sbjct: 120 TYLTHIEP--GSEVKITGPV---GKEMLLPDDPEANVIMLATGTGIAPMRTYL 167
>pdb|1W35|A Chain A, Ferredoxin-Nadp+ Reductase (Mutation: Y 303 W)
pdb|1W87|A Chain A, Ferredoxin-Nadp Reductase (Mutation: Y 303 W) Complexed
With Nadp By Cocrystallization
pdb|1W87|B Chain B, Ferredoxin-Nadp Reductase (Mutation: Y 303 W) Complexed
With Nadp By Cocrystallization
Length = 304
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 52/113 (46%), Gaps = 14/113 (12%)
Query: 458 IGVFFAAVAPHLQP---RYYSISSSPRFAPDRVHVTCALV-----YGPTPTGRIHKGVCS 509
IG+ V + +P R YSI+S+ R D T +L Y +G GVCS
Sbjct: 61 IGIIPPGVDKNGKPEKLRLYSIAST-RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCS 119
Query: 510 TWMKNAIPLEGNGDCSWAPIFIRPSNFKLPANPSVPIIMVGPGTGLAPFRGFL 562
T++ + P G+ P+ LP +P +IM+ GTG+AP R +L
Sbjct: 120 TYLTHIEP--GSEVKITGPV---GKEMLLPDDPEANVIMLATGTGIAPMRTYL 167
>pdb|1OGJ|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Leu 263 Replaced By
Pro (L263p)
Length = 303
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 52/113 (46%), Gaps = 14/113 (12%)
Query: 458 IGVFFAAVAPHLQP---RYYSISSSPRFAPDRVHVTCALV-----YGPTPTGRIHKGVCS 509
IG+ V + +P R YSI+S+ R D T +L Y +G GVCS
Sbjct: 60 IGIIPPGVDKNGKPEKLRLYSIAST-RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCS 118
Query: 510 TWMKNAIPLEGNGDCSWAPIFIRPSNFKLPANPSVPIIMVGPGTGLAPFRGFL 562
T++ + P G+ P+ LP +P +IM+ GTG+AP R +L
Sbjct: 119 TYLTHIEP--GSEVKITGPV---GKEMLLPDDPEANVIMLATGTGIAPMRTYL 166
>pdb|1H85|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Val 136 Replaced By
Leu (V136l)
Length = 295
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 52/113 (46%), Gaps = 14/113 (12%)
Query: 458 IGVFFAAVAPHLQP---RYYSISSSPRFAPDRVHVTCALV-----YGPTPTGRIHKGVCS 509
IG+ V + +P R YSI+S+ R D T +L Y +G GVCS
Sbjct: 52 IGIIPPGVDKNGKPEKLRLYSIAST-RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCS 110
Query: 510 TWMKNAIPLEGNGDCSWAPIFIRPSNFKLPANPSVPIIMVGPGTGLAPFRGFL 562
T++ + P G+ P+ LP +P +IM+ GTG+AP R +L
Sbjct: 111 TYLTHIEP--GSEVKITGPL---GKEMLLPDDPEANVIMLATGTGIAPMRTYL 158
>pdb|1BQE|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Thr 155 Replaced By
Gly (T155g)
Length = 295
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 52/113 (46%), Gaps = 14/113 (12%)
Query: 458 IGVFFAAVAPHLQP---RYYSISSSPRFAPDRVHVTCALV-----YGPTPTGRIHKGVCS 509
IG+ V + +P R YSI+S+ R D T +L Y +G GVCS
Sbjct: 52 IGIIPPGVDKNGKPEKLRLYSIAST-RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCS 110
Query: 510 TWMKNAIPLEGNGDCSWAPIFIRPSNFKLPANPSVPIIMVGPGTGLAPFRGFL 562
T++ + P G+ P+ LP +P +IM+ GTG+AP R +L
Sbjct: 111 TYLTHIEP--GSEVKITGPV---GKEMLLPDDPEANVIMLAGGTGIAPMRTYL 158
>pdb|1JB9|A Chain A, Crystal Structure Of The Ferredoxin:nadp+ Reductase From
Maize Root At 1.7 Angstroms
Length = 316
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 59/128 (46%), Gaps = 22/128 (17%)
Query: 472 RYYSISSSPRFAPD---RVHVTC---ALVYGPTPTGR---IHKGVCSTWMKNAIP---LE 519
R YSI+S+ R+ + R C A+ Y P TG+ GVCS ++ N+ P ++
Sbjct: 91 RLYSIAST-RYGDNFDGRTGSLCVRRAVYYDPE-TGKEDPSKNGVCSNFLCNSKPGDKIQ 148
Query: 520 GNGDCSWAPIFIRPSNFKLPANPSVPIIMVGPGTGLAPFRGFLQERMALKQDGAQLGP-A 578
G I + P +P+ IM+ GTG+APFRG+L+ + G A
Sbjct: 149 LTGPS--GKIMLLPEE-----DPNATHIMIATGTGVAPFRGYLRRMFMEDVPNYRFGGLA 201
Query: 579 LLFFGCRN 586
LF G N
Sbjct: 202 WLFLGVAN 209
>pdb|3LVB|A Chain A, Crystal Structure Of The Ferredoxin:nadp+ Reductase From
Maize Root At 1.7 Angstroms - Test Set Withheld
Length = 311
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 59/128 (46%), Gaps = 22/128 (17%)
Query: 472 RYYSISSSPRFAPD---RVHVTC---ALVYGPTPTGR---IHKGVCSTWMKNAIP---LE 519
R YSI+S+ R+ + R C A+ Y P TG+ GVCS ++ N+ P ++
Sbjct: 86 RLYSIAST-RYGDNFDGRTGSLCVRRAVYYDPE-TGKEDPSKNGVCSNFLCNSKPGDKIQ 143
Query: 520 GNGDCSWAPIFIRPSNFKLPANPSVPIIMVGPGTGLAPFRGFLQERMALKQDGAQLGP-A 578
G I + P +P+ IM+ GTG+APFRG+L+ + G A
Sbjct: 144 LTGPS--GKIMLLPEE-----DPNATHIMIATGTGVAPFRGYLRRMFMEDVPNYRFGGLA 196
Query: 579 LLFFGCRN 586
LF G N
Sbjct: 197 WLFLGVAN 204
>pdb|2BSA|A Chain A, Ferredoxin-Nadp Reductase (Mutation: Y 303 S) Complexed
With Nadp
Length = 303
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 52/113 (46%), Gaps = 14/113 (12%)
Query: 458 IGVFFAAVAPHLQP---RYYSISSSPRFAPDRVHVTCALV-----YGPTPTGRIHKGVCS 509
IG+ V + +P R YSI+S+ R D T +L Y +G GVCS
Sbjct: 60 IGIIPPGVDKNGKPEKLRLYSIAST-RHGDDVDDKTISLCVRQLEYKHPESGATVYGVCS 118
Query: 510 TWMKNAIPLEGNGDCSWAPIFIRPSNFKLPANPSVPIIMVGPGTGLAPFRGFL 562
T++ + P G+ P+ LP +P +IM+ GTG+AP R +L
Sbjct: 119 TYLTHIEP--GSEVKITGPV---GKEMLLPDDPEANVIMLATGTGIAPMRTYL 166
>pdb|3LO8|A Chain A, Crystal Structure Of The Oxidized Form Of Ferredoxin:nadp+
Reductase From Maize Root At 1.05 Angstroms
Length = 311
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 59/128 (46%), Gaps = 22/128 (17%)
Query: 472 RYYSISSSPRFAPD---RVHVTC---ALVYGPTPTGR---IHKGVCSTWMKNAIP---LE 519
R YSI+S+ R+ + R C A+ Y P TG+ GVCS ++ N+ P ++
Sbjct: 86 RLYSIAST-RYGDNFDGRTGSLCVRRAVYYDPE-TGKEDPSKNGVCSNFLCNSKPGDKIQ 143
Query: 520 GNGDCSWAPIFIRPSNFKLPANPSVPIIMVGPGTGLAPFRGFLQERMALKQDGAQLGP-A 578
G I + P +P+ IM+ GTG+APFRG+L+ + G A
Sbjct: 144 LTGPS--GKIMLLPEE-----DPNATHIMIATGTGVAPFRGYLRRMFMEDVPNYRFGGLA 196
Query: 579 LLFFGCRN 586
LF G N
Sbjct: 197 WLFLGVAN 204
>pdb|1QH0|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Leu 76 Mutated By
Asp And Leu 78 Mutated By Asp
Length = 295
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 52/113 (46%), Gaps = 14/113 (12%)
Query: 458 IGVFFAAVAPHLQP---RYYSISSSPRFAPDRVHVTCALV-----YGPTPTGRIHKGVCS 509
IG+ V + +P R YSI+S+ R D T +L Y +G GVCS
Sbjct: 52 IGIIPPGVDKNGKPEKDRDYSIAST-RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCS 110
Query: 510 TWMKNAIPLEGNGDCSWAPIFIRPSNFKLPANPSVPIIMVGPGTGLAPFRGFL 562
T++ + P G+ P+ LP +P +IM+ GTG+AP R +L
Sbjct: 111 TYLTHIEP--GSEVKITGPV---GKEMLLPDDPEANVIMLATGTGIAPMRTYL 158
>pdb|1QGZ|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Leu 78 Replaced By
Asp (L78d)
Length = 295
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 52/113 (46%), Gaps = 14/113 (12%)
Query: 458 IGVFFAAVAPHLQP---RYYSISSSPRFAPDRVHVTCALV-----YGPTPTGRIHKGVCS 509
IG+ V + +P R YSI+S+ R D T +L Y +G GVCS
Sbjct: 52 IGIIPPGVDKNGKPEKLRDYSIAST-RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCS 110
Query: 510 TWMKNAIPLEGNGDCSWAPIFIRPSNFKLPANPSVPIIMVGPGTGLAPFRGFL 562
T++ + P G+ P+ LP +P +IM+ GTG+AP R +L
Sbjct: 111 TYLTHIEP--GSEVKITGPV---GKEMLLPDDPEANVIMLATGTGIAPMRTYL 158
>pdb|4HEQ|A Chain A, The Crystal Structure Of Flavodoxin From Desulfovibrio
Gigas
pdb|4HEQ|B Chain B, The Crystal Structure Of Flavodoxin From Desulfovibrio
Gigas
Length = 146
Score = 37.0 bits (84), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 64/139 (46%), Gaps = 13/139 (9%)
Query: 85 KVTVFYGTQTGTAEGFAKALAEEIKAR-YEKAAVKVVDLDDYAMDDEQYEEKLKKETLAF 143
K + YG+ TG EG A+A+A+ + + E V V D+ + E Y+ +
Sbjct: 3 KALIVYGSTTGNTEGVAEAIAKTLNSEGMETTVVNVADVTAPGL-AEGYD-------VVL 54
Query: 144 FMVATYGDGEPTDNAARFYKWFTEGNDRGPWLQQLKFGVFGLGNRQYEHFNKIGIVLDEE 203
+T+GD E + F + + + G L+ K GVFG G+ Y +F V+ E+
Sbjct: 55 LGCSTWGDDE-IELQEDFVPLYEDLDRAG--LKDKKVGVFGCGDSSYTYFCGAVDVI-EK 110
Query: 204 LCKQGGARLVPLGLGDDDQ 222
++ GA LV L D +
Sbjct: 111 KAEELGATLVASSLKIDGE 129
>pdb|1OGI|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Thr 155 Replaced By
Gly And Ala 160 Replaced By Thr (T155g-A160t)
Length = 303
Score = 36.6 bits (83), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 51/113 (45%), Gaps = 14/113 (12%)
Query: 458 IGVFFAAVAPHLQP---RYYSISSSPRFAPDRVHVTCALV-----YGPTPTGRIHKGVCS 509
IG+ V + +P R YSI+S+ R D T +L Y +G GVCS
Sbjct: 60 IGIIPPGVDKNGKPEKLRLYSIAST-RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCS 118
Query: 510 TWMKNAIPLEGNGDCSWAPIFIRPSNFKLPANPSVPIIMVGPGTGLAPFRGFL 562
T++ + P G+ P+ LP +P +IM+ GTG+ P R +L
Sbjct: 119 TYLTHIEP--GSEVKITGPV---GKEMLLPDDPEANVIMLAGGTGITPMRTYL 166
>pdb|2VYQ|A Chain A, Ferredoxin:nadp Reductase Mutant With Thr 155 Replaced By
Gly, Ala 160 Replaced By Thr, Leu 263 Replaced By Pro
And Tyr 303 Replaced By Ser (T155g-A160t-L263p-Y303s)
pdb|2VZL|A Chain A, Ferredoxin-Nadp Reductase (Mutations: T155g, A160t, L263p
And Y303s) Complexed With Nad By Cocrystallization
Length = 304
Score = 36.6 bits (83), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 51/113 (45%), Gaps = 14/113 (12%)
Query: 458 IGVFFAAVAPHLQP---RYYSISSSPRFAPDRVHVTCALV-----YGPTPTGRIHKGVCS 509
IG+ V + +P R YSI+S+ R D T +L Y +G GVCS
Sbjct: 61 IGIIPPGVDKNGKPEKLRLYSIAST-RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCS 119
Query: 510 TWMKNAIPLEGNGDCSWAPIFIRPSNFKLPANPSVPIIMVGPGTGLAPFRGFL 562
T++ + P G+ P+ LP +P +IM+ GTG+ P R +L
Sbjct: 120 TYLTHIEP--GSEVKITGPV---GKEMLLPDDPEANVIMLAGGTGITPMRTYL 167
>pdb|1H42|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Thr 155 Replaced By
Gly, Ala 160 Replaced By Thr And Leu 263 Replaced By Pro
(T155g-A160t-L263p)
Length = 304
Score = 36.6 bits (83), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 51/113 (45%), Gaps = 14/113 (12%)
Query: 458 IGVFFAAVAPHLQP---RYYSISSSPRFAPDRVHVTCALV-----YGPTPTGRIHKGVCS 509
IG+ V + +P R YSI+S+ R D T +L Y +G GVCS
Sbjct: 61 IGIIPPGVDKNGKPEKLRLYSIAST-RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCS 119
Query: 510 TWMKNAIPLEGNGDCSWAPIFIRPSNFKLPANPSVPIIMVGPGTGLAPFRGFL 562
T++ + P G+ P+ LP +P +IM+ GTG+ P R +L
Sbjct: 120 TYLTHIEP--GSEVKITGPV---GKEMLLPDDPEANVIMLAGGTGITPMRTYL 167
>pdb|1J9E|A Chain A, Low Temperature (100k) Crystal Structure Of Flavodoxin D.
Vulgaris S35c Mutant At 1.44 Angstrom Resolution
pdb|1XT6|A Chain A, S35c Flavodoxin Mutant In The Semiquinone State
Length = 147
Score = 36.2 bits (82), Expect = 0.047, Method: Composition-based stats.
Identities = 43/150 (28%), Positives = 62/150 (41%), Gaps = 15/150 (10%)
Query: 85 KVTVFYGTQTGTAEGFAKALAEEI-KARYEKAAVKVVDLDDYAMDDEQYEEKLKKETLAF 143
K + YG+ TG E A+ +A E+ A YE VD D A + + L
Sbjct: 2 KALIVYGSTTGNTEYTAETIARELADAGYE------VDCRDAA--SVEAGGLFEGFDLVL 53
Query: 144 FMVATYGDGEPTDNAARFYKWFTEGNDRGPWLQQLKFGVFGLGNRQYEHFNKIGIVLDEE 203
+T+GD + + F F + G Q K FG G+ YE+F ++E+
Sbjct: 54 LGCSTWGD-DSIELQDDFIPLFDSLEETGA--QGRKVACFGCGDSSYEYFCGAVDAIEEK 110
Query: 204 LCKQGGARLVPLGL--GDDDQCIEDDFTAW 231
L K GA +V GL D + DD W
Sbjct: 111 L-KNLGAEIVQDGLRIDGDPRAARDDIVGW 139
>pdb|2BMW|A Chain A, Ferredoxin: Nadp+reductase Mutant With Thr 155 Replaced By
Gly, Ala 160 Replaced By Thr, Leu 263 Replaced By Pro,
Arg 264 Replaced By Pro And Gly 265 Replaced By Pro
(T155g- A160t-L263p-R264p-G265p)
Length = 304
Score = 36.2 bits (82), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 51/113 (45%), Gaps = 14/113 (12%)
Query: 458 IGVFFAAVAPHLQP---RYYSISSSPRFAPDRVHVTCALV-----YGPTPTGRIHKGVCS 509
IG+ V + +P R YSI+S+ R D T +L Y +G GVCS
Sbjct: 61 IGIIPPGVDKNGKPEKLRLYSIAST-RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCS 119
Query: 510 TWMKNAIPLEGNGDCSWAPIFIRPSNFKLPANPSVPIIMVGPGTGLAPFRGFL 562
T++ + P G+ P+ LP +P +IM+ GTG+ P R +L
Sbjct: 120 TYLTHIEP--GSEVKITGPVG---KEMLLPDDPEANVIMLAGGTGITPMRTYL 167
>pdb|1J8Q|A Chain A, Low Temperature (100k) Crystal Structure Of Flavodoxin D.
Vulgaris Wild-Type At 1.35 Angstrom Resolution
pdb|2FX2|A Chain A, Comparison Of The Crystal Structures Of A Flavodoxin In
Its Three Oxidation States At Cryogenic Temperatures
pdb|3FX2|A Chain A, Comparison Of The Crystal Structures Of A Flavodoxin In
Its Three Oxidation States At Cryogenic Temperatures
pdb|4FX2|A Chain A, Comparison Of The Crystal Structures Of A Flavodoxin In
Its Three Oxidation States At Cryogenic Temperatures
pdb|5FX2|A Chain A, Comparison Of The Crystal Structures Of A Flavodoxin In
Its Three Oxidation States At Cryogenic Temperatures
Length = 147
Score = 35.8 bits (81), Expect = 0.068, Method: Composition-based stats.
Identities = 43/150 (28%), Positives = 62/150 (41%), Gaps = 15/150 (10%)
Query: 85 KVTVFYGTQTGTAEGFAKALAEEI-KARYEKAAVKVVDLDDYAMDDEQYEEKLKKETLAF 143
K + YG+ TG E A+ +A E+ A YE VD D A + + L
Sbjct: 2 KALIVYGSTTGNTEYTAETIARELADAGYE------VDSRDAA--SVEAGGLFEGFDLVL 53
Query: 144 FMVATYGDGEPTDNAARFYKWFTEGNDRGPWLQQLKFGVFGLGNRQYEHFNKIGIVLDEE 203
+T+GD + + F F + G Q K FG G+ YE+F ++E+
Sbjct: 54 LGCSTWGD-DSIELQDDFIPLFDSLEETGA--QGRKVACFGCGDSSYEYFCGAVDAIEEK 110
Query: 204 LCKQGGARLVPLGL--GDDDQCIEDDFTAW 231
L K GA +V GL D + DD W
Sbjct: 111 L-KNLGAEIVQDGLRIDGDPRAARDDIVGW 139
>pdb|1WSB|A Chain A, Flavodoxin Mutant- S64c
pdb|1WSW|A Chain A, Low Temperature (100k) Crystal Structure Of Flavodoxin
Mutant S64c, Dimer, Semiquinone State
pdb|1XYV|A Chain A, Low Temperature (100k) Crystal Structure Of Flavodoxin
Mutant S64c, Monomer, Semiquinone State
pdb|1XYY|A Chain A, Low Temperature (100k) Crystal Structure Of Flavodoxin
Mutant S64c, Homodimer, Oxidised State
Length = 148
Score = 35.8 bits (81), Expect = 0.074, Method: Composition-based stats.
Identities = 43/152 (28%), Positives = 62/152 (40%), Gaps = 19/152 (12%)
Query: 85 KVTVFYGTQTGTAEGFAKALAEEI-KARYEKAAVKVVDLDDYAMDDEQYEEKLKKETLAF 143
K + YG+ TG E A+ +A E+ A YE VD D A + + L
Sbjct: 3 KALIVYGSTTGNTEYTAETIARELADAGYE------VDSRDAA--SVEAGGLFEGFDLVL 54
Query: 144 FMVATYGDG--EPTDNAARFYKWFTEGNDRGPWLQQLKFGVFGLGNRQYEHFNKIGIVLD 201
+T+GD E D+ + E +G K FG G+ YE+F ++
Sbjct: 55 LGCSTWGDDCIELQDDFIPLFDSLEETGAQGR-----KVACFGCGDSSYEYFCGAVDAIE 109
Query: 202 EELCKQGGARLVPLGL--GDDDQCIEDDFTAW 231
E+L K GA +V GL D + DD W
Sbjct: 110 EKL-KNLGAEIVQDGLRIDGDPRAARDDIVGW 140
>pdb|1J9G|A Chain A, Low Temperature (100k) Crystal Structure Of Flavodoxin D.
Vulgaris S64c Mutant, Monomer Oxidised, At 2.4 Angstrom
Resolution
Length = 147
Score = 35.4 bits (80), Expect = 0.081, Method: Composition-based stats.
Identities = 43/152 (28%), Positives = 62/152 (40%), Gaps = 19/152 (12%)
Query: 85 KVTVFYGTQTGTAEGFAKALAEEI-KARYEKAAVKVVDLDDYAMDDEQYEEKLKKETLAF 143
K + YG+ TG E A+ +A E+ A YE VD D A + + L
Sbjct: 2 KALIVYGSTTGNTEYTAETIARELADAGYE------VDSRDAA--SVEAGGLFEGFDLVL 53
Query: 144 FMVATYGDG--EPTDNAARFYKWFTEGNDRGPWLQQLKFGVFGLGNRQYEHFNKIGIVLD 201
+T+GD E D+ + E +G K FG G+ YE+F ++
Sbjct: 54 LGCSTWGDDCIELQDDFIPLFDSLEETGAQGR-----KVACFGCGDSSYEYFCGAVDAIE 108
Query: 202 EELCKQGGARLVPLGL--GDDDQCIEDDFTAW 231
E+L K GA +V GL D + DD W
Sbjct: 109 EKL-KNLGAEIVQDGLRIDGDPRAARDDIVGW 139
>pdb|3F6R|A Chain A, Desulfovibrio Desulfuricans (Atcc 29577) Oxidized
Flavodoxin
pdb|3F6R|B Chain B, Desulfovibrio Desulfuricans (Atcc 29577) Oxidized
Flavodoxin
pdb|3F6R|C Chain C, Desulfovibrio Desulfuricans (Atcc 29577) Oxidized
Flavodoxin
pdb|3F6R|D Chain D, Desulfovibrio Desulfuricans (Atcc 29577) Oxidized
Flavodoxin
pdb|3F6S|A Chain A, Desulfovibrio Desulfuricans (Atcc 29577) Oxidized
Flavodoxin Alternate Conformers
pdb|3F6S|B Chain B, Desulfovibrio Desulfuricans (Atcc 29577) Oxidized
Flavodoxin Alternate Conformers
pdb|3F6S|D Chain D, Desulfovibrio Desulfuricans (Atcc 29577) Oxidized
Flavodoxin Alternate Conformers
pdb|3F6S|E Chain E, Desulfovibrio Desulfuricans (Atcc 29577) Oxidized
Flavodoxin Alternate Conformers
pdb|3F6S|F Chain F, Desulfovibrio Desulfuricans (Atcc 29577) Oxidized
Flavodoxin Alternate Conformers
pdb|3F6S|H Chain H, Desulfovibrio Desulfuricans (Atcc 29577) Oxidized
Flavodoxin Alternate Conformers
pdb|3F6S|I Chain I, Desulfovibrio Desulfuricans (Atcc 29577) Oxidized
Flavodoxin Alternate Conformers
pdb|3F6S|G Chain G, Desulfovibrio Desulfuricans (Atcc 29577) Oxidized
Flavodoxin Alternate Conformers
pdb|3F90|A Chain A, Desulfovibrio Desulfuricans (Atcc 29577) Semiquinone
Flavodoxin
pdb|3F90|B Chain B, Desulfovibrio Desulfuricans (Atcc 29577) Semiquinone
Flavodoxin
pdb|3F90|D Chain D, Desulfovibrio Desulfuricans (Atcc 29577) Semiquinone
Flavodoxin
pdb|3F90|E Chain E, Desulfovibrio Desulfuricans (Atcc 29577) Semiquinone
Flavodoxin
pdb|3F90|F Chain F, Desulfovibrio Desulfuricans (Atcc 29577) Semiquinone
Flavodoxin
pdb|3F90|H Chain H, Desulfovibrio Desulfuricans (Atcc 29577) Semiquinone
Flavodoxin
pdb|3F90|I Chain I, Desulfovibrio Desulfuricans (Atcc 29577) Semiquinone
Flavodoxin
pdb|3F90|G Chain G, Desulfovibrio Desulfuricans (Atcc 29577) Semiquinone
Flavodoxin
Length = 148
Score = 35.0 bits (79), Expect = 0.13, Method: Composition-based stats.
Identities = 40/137 (29%), Positives = 60/137 (43%), Gaps = 17/137 (12%)
Query: 84 TKVTVFYGTQTGTAEGFAKALAEEIKAR-YEKAAVKVVDLDDYAMDDEQYEEKLKKETLA 142
+KV + +G+ TG E A+ L E I A +E + D + D Y+ L
Sbjct: 2 SKVLIVFGSSTGNTESIAQKLEELIAAGGHEVTLLNAADASAENLAD-GYDAVL------ 54
Query: 143 FFMVATYG--DGEPTDNAARFYKWFTEGNDRGPWLQQLKFGVFGLGNRQYEHFNKIGIVL 200
F + +G D E D+ F F E + G L K F G+++YEHF +
Sbjct: 55 -FGCSAWGMEDLEMQDD---FLSLFEEFDRIG--LAGRKVAAFASGDQEYEHFCG-AVPA 107
Query: 201 DEELCKQGGARLVPLGL 217
EE K+ GA ++ GL
Sbjct: 108 IEERAKELGATIIAEGL 124
>pdb|1AKQ|A Chain A, D95a Oxidized Flavodoxin Mutant From D. Vulgaris
pdb|1AKU|A Chain A, D95a Hydroquinone Flavodoxin Mutant From D. Vulgaris
pdb|1AKV|A Chain A, D95a Semiquinone Flavodoxin Mutant From D. Vulgaris
Length = 147
Score = 34.3 bits (77), Expect = 0.20, Method: Composition-based stats.
Identities = 43/150 (28%), Positives = 61/150 (40%), Gaps = 15/150 (10%)
Query: 85 KVTVFYGTQTGTAEGFAKALAEEI-KARYEKAAVKVVDLDDYAMDDEQYEEKLKKETLAF 143
K + YG+ TG E A+ +A E+ A YE VD D A + + L
Sbjct: 2 KALIVYGSTTGNTEYTAETIARELADAGYE------VDSRDAA--SVEAGGLFEGFDLVL 53
Query: 144 FMVATYGDGEPTDNAARFYKWFTEGNDRGPWLQQLKFGVFGLGNRQYEHFNKIGIVLDEE 203
+T+GD + + F F + G Q K FG G YE+F ++E+
Sbjct: 54 LGCSTWGD-DSIELQDDFIPLFDSLEETGA--QGRKVACFGCGASSYEYFCGAVDAIEEK 110
Query: 204 LCKQGGARLVPLGL--GDDDQCIEDDFTAW 231
L K GA +V GL D + DD W
Sbjct: 111 L-KNLGAEIVQDGLRIDGDPRAARDDIVGW 139
>pdb|1OBO|A Chain A, W57l Flavodoxin From Anabaena
pdb|1OBO|B Chain B, W57l Flavodoxin From Anabaena
Length = 169
Score = 34.3 bits (77), Expect = 0.22, Method: Composition-based stats.
Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 4/45 (8%)
Query: 85 KVTVFYGTQTGTAEGFAKALAEE----IKARYEKAAVKVVDLDDY 125
K+ +FYGTQTG E A+ + +E + ++ + +V DL+DY
Sbjct: 3 KIGLFYGTQTGKTESVAEIIRDEFGNDVVTLHDVSQAEVTDLNDY 47
>pdb|2KQU|A Chain A, F98n Apoflavodoxin From Anabaena Pcc 7119
Length = 169
Score = 34.3 bits (77), Expect = 0.23, Method: Composition-based stats.
Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 4/45 (8%)
Query: 85 KVTVFYGTQTGTAEGFAKALAEE----IKARYEKAAVKVVDLDDY 125
K+ +FYGTQTG E A+ + +E + ++ + +V DL+DY
Sbjct: 3 KIGLFYGTQTGKTESVAEIIRDEFGNDVVTLHDVSQAEVTDLNDY 47
>pdb|1OBV|A Chain A, Y94f Flavodoxin From Anabaena
Length = 169
Score = 34.3 bits (77), Expect = 0.23, Method: Composition-based stats.
Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 4/45 (8%)
Query: 85 KVTVFYGTQTGTAEGFAKALAEE----IKARYEKAAVKVVDLDDY 125
K+ +FYGTQTG E A+ + +E + ++ + +V DL+DY
Sbjct: 3 KIGLFYGTQTGKTESVAEIIRDEFGNDVVTLHDVSQAEVTDLNDY 47
>pdb|1QHE|A Chain A, Energetics Of A Hydrogen Bond (Charged And Neutral) And Of
A Cation-Pi Interaction In Apoflavodoxin
pdb|1FTG|A Chain A, Structure Of Apoflavodoxin: Closure Of A
TyrosineTRYPTOPHAN AROMATIC Gate Leads To A Compact Fold
Length = 168
Score = 34.3 bits (77), Expect = 0.23, Method: Composition-based stats.
Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 4/45 (8%)
Query: 85 KVTVFYGTQTGTAEGFAKALAEE----IKARYEKAAVKVVDLDDY 125
K+ +FYGTQTG E A+ + +E + ++ + +V DL+DY
Sbjct: 2 KIGLFYGTQTGKTESVAEIIRDEFGNDVVTLHDVSQAEVTDLNDY 46
>pdb|1FLV|A Chain A, Structure Of The Oxidized Long Chain Flavodoxin From
Anabaena 7120 At 2 Angstroms Resolution
pdb|1RCF|A Chain A, Structure Of The Trigonal Form Of Recombinant Oxidized
Flavodoxin From Anabaena 7120 At 1.40 Angstroms
Resolution
Length = 169
Score = 33.9 bits (76), Expect = 0.24, Method: Composition-based stats.
Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 4/45 (8%)
Query: 85 KVTVFYGTQTGTAEGFAKALAEE----IKARYEKAAVKVVDLDDY 125
K+ +FYGTQTG E A+ + +E + ++ + +V DL+DY
Sbjct: 3 KIGLFYGTQTGKTESVAEIIRDEFGNDVVTLHDVSQAEVTDLNDY 47
>pdb|1DX9|A Chain A, W57a Apoflavodoxin From Anabaena
pdb|1DX9|B Chain B, W57a Apoflavodoxin From Anabaena
pdb|1DX9|C Chain C, W57a Apoflavodoxin From Anabaena
pdb|1DX9|D Chain D, W57a Apoflavodoxin From Anabaena
Length = 169
Score = 33.9 bits (76), Expect = 0.24, Method: Composition-based stats.
Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 4/45 (8%)
Query: 85 KVTVFYGTQTGTAEGFAKALAEE----IKARYEKAAVKVVDLDDY 125
K+ +FYGTQTG E A+ + +E + ++ + +V DL+DY
Sbjct: 3 KIGLFYGTQTGKTESVAEIIRDEFGNDVVTLHDVSQAEVTDLNDY 47
>pdb|2V5V|A Chain A, W57e Flavodoxin From Anabaena
pdb|2V5V|B Chain B, W57e Flavodoxin From Anabaena
Length = 169
Score = 33.9 bits (76), Expect = 0.24, Method: Composition-based stats.
Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 4/45 (8%)
Query: 85 KVTVFYGTQTGTAEGFAKALAEE----IKARYEKAAVKVVDLDDY 125
K+ +FYGTQTG E A+ + +E + ++ + +V DL+DY
Sbjct: 3 KIGLFYGTQTGKTESVAEIIRDEFGNDVVTLHDVSQAEVTDLNDY 47
>pdb|2V5U|A Chain A, I92a Flavodoxin From Anabaena
pdb|2V5U|B Chain B, I92a Flavodoxin From Anabaena
Length = 169
Score = 33.9 bits (76), Expect = 0.25, Method: Composition-based stats.
Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 4/45 (8%)
Query: 85 KVTVFYGTQTGTAEGFAKALAEE----IKARYEKAAVKVVDLDDY 125
K+ +FYGTQTG E A+ + +E + ++ + +V DL+DY
Sbjct: 3 KIGLFYGTQTGKTESVAEIIRDEFGNDVVTLHDVSQAEVTDLNDY 47
>pdb|1CZH|A Chain A, Comparisons Of Wild Type And Mutant Flavodoxins From
Anacystis Nidulans. Structural Determinants Of The Redox
Potentials.
pdb|1CZO|A Chain A, Comparisons Of Wild Type And Mutant Flavodoxins From
Anacystis Nidulans. Structural Determinants Of The Redox
Potentials.
pdb|1D03|A Chain A, Refined Structures Of Oxidized Flavodoxin From Anacystis
Nidulans
Length = 169
Score = 33.9 bits (76), Expect = 0.27, Method: Composition-based stats.
Identities = 32/126 (25%), Positives = 52/126 (41%), Gaps = 16/126 (12%)
Query: 85 KVTVFYGTQTGTAEGFAKALAEEIKARYEKAAVKVVDLDDYAMDDEQYEEKLKKETLAFF 144
K+ +FYGTQTG + A+++ +E +VDL+D A D L
Sbjct: 2 KIGLFYGTQTGVTQTIAESIQQEFGGE------SIVDLNDIANADAS---DLNAYDYLII 52
Query: 145 MVATYGDGEPTDNAARFYKWFTEGNDRGPWLQQLKFGVFGLGNR--QYEHFNKIGIVLDE 202
T+G GE + Y N +G K FG G++ ++F +L+E
Sbjct: 53 GCPTWGVGELQSDWEGIYDDLDSVNFQGK-----KVAYFGAGDQVGYSDNFQDAMGILEE 107
Query: 203 ELCKQG 208
++ G
Sbjct: 108 KISSLG 113
>pdb|1I1O|A Chain A, Room Temperature Crystal Structure Flavodoxin D. Vulgaris
Mutant Y98h At 2.0 Ang. Resolution
Length = 147
Score = 33.9 bits (76), Expect = 0.28, Method: Composition-based stats.
Identities = 42/150 (28%), Positives = 62/150 (41%), Gaps = 15/150 (10%)
Query: 85 KVTVFYGTQTGTAEGFAKALAEEI-KARYEKAAVKVVDLDDYAMDDEQYEEKLKKETLAF 143
K + YG+ TG E A+ +A E+ A YE VD D A + + L
Sbjct: 2 KALIVYGSTTGNTEYTAETIARELADAGYE------VDSRDAA--SVEAGGLFEGFDLVL 53
Query: 144 FMVATYGDGEPTDNAARFYKWFTEGNDRGPWLQQLKFGVFGLGNRQYEHFNKIGIVLDEE 203
+T+GD + + F F + G Q K FG G+ +E+F ++E+
Sbjct: 54 LGCSTWGD-DSIELQDDFIPLFDSLEETGA--QGRKVACFGCGDSSHEYFCGAVDAIEEK 110
Query: 204 LCKQGGARLVPLGL--GDDDQCIEDDFTAW 231
L K GA +V GL D + DD W
Sbjct: 111 L-KNLGAEIVQDGLRIDGDPRAARDDIVGW 139
>pdb|1CZR|A Chain A, Comparisons Of Wild Type And Mutant Flavodoxins From
Anacystis Nidulans. Structural Determinants Of The Redox
Potentials
Length = 169
Score = 33.1 bits (74), Expect = 0.40, Method: Composition-based stats.
Identities = 32/126 (25%), Positives = 51/126 (40%), Gaps = 16/126 (12%)
Query: 85 KVTVFYGTQTGTAEGFAKALAEEIKARYEKAAVKVVDLDDYAMDDEQYEEKLKKETLAFF 144
K+ +FYGTQTG + A+++ +E +VDL+D A D L
Sbjct: 2 KIGLFYGTQTGVTQTIAESIQQEFGGE------SIVDLNDIANADAS---DLNAYDYLII 52
Query: 145 MVATYGDGEPTDNAARFYKWFTEGNDRGPWLQQLKFGVFGLGNR--QYEHFNKIGIVLDE 202
T+ GE + Y N +G K FG GN+ ++F +L+E
Sbjct: 53 GCPTWNVGELQSDWEGIYDDLDSVNFQGK-----KVAYFGAGNQVGYSDNFQDAMGILEE 107
Query: 203 ELCKQG 208
++ G
Sbjct: 108 KISSLG 113
>pdb|1BU5|A Chain A, X-Ray Crystal Structure Of The Desulfovibrio Vulgaris
(Hildenborough) Apoflavodoxin-Riboflavin Complex
pdb|1BU5|B Chain B, X-Ray Crystal Structure Of The Desulfovibrio Vulgaris
(Hildenborough) Apoflavodoxin-Riboflavin Complex
Length = 147
Score = 33.1 bits (74), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 61/150 (40%), Gaps = 15/150 (10%)
Query: 85 KVTVFYGTQTGTAEGFAKALAEEI-KARYEKAAVKVVDLDDYAMDDEQYEEKLKKETLAF 143
K + YG+ TG E A+ +A E+ A YE + ++ + + L
Sbjct: 2 KALIVYGSTTGNTEYTAETIARELADAGYEVDSRDAASVEAGGL--------FEGFDLVL 53
Query: 144 FMVATYGDGEPTDNAARFYKWFTEGNDRGPWLQQLKFGVFGLGNRQYEHFNKIGIVLDEE 203
+T+GD + + F F + G Q K FG G+ YE+F ++E+
Sbjct: 54 LGCSTWGD-DSIELQDDFIPLFDSLEETGA--QGRKVACFGCGDSSYEYFCGAVDAIEEK 110
Query: 204 LCKQGGARLVPLGL--GDDDQCIEDDFTAW 231
L K GA +V GL D + DD W
Sbjct: 111 L-KNLGAEIVQDGLRIDGDPRAARDDIVGW 139
>pdb|1AKT|A Chain A, G61n Oxidized Flavodoxin Mutant
Length = 147
Score = 33.1 bits (74), Expect = 0.49, Method: Composition-based stats.
Identities = 42/150 (28%), Positives = 61/150 (40%), Gaps = 15/150 (10%)
Query: 85 KVTVFYGTQTGTAEGFAKALAEEI-KARYEKAAVKVVDLDDYAMDDEQYEEKLKKETLAF 143
K + YG+ TG E A+ +A E+ A YE VD D A + + L
Sbjct: 2 KALIVYGSTTGNTEYTAETIARELADAGYE------VDSRDAA--SVEAGGLFEGFDLVL 53
Query: 144 FMVATYGDGEPTDNAARFYKWFTEGNDRGPWLQQLKFGVFGLGNRQYEHFNKIGIVLDEE 203
+T+ D + + F F + G Q K FG G+ YE+F ++E+
Sbjct: 54 LGCSTWND-DSIELQDDFIPLFDSLEETGA--QGRKVACFGCGDSSYEYFCGAVDAIEEK 110
Query: 204 LCKQGGARLVPLGL--GDDDQCIEDDFTAW 231
L K GA +V GL D + DD W
Sbjct: 111 L-KNLGAEIVQDGLRIDGDPRAARDDIVGW 139
>pdb|1CZK|A Chain A, Comparisons Of Wild Type And Mutant Flavodoxins From
Anacystis Nidulans. Structural Determinants Of The Redox
Potentials
Length = 169
Score = 32.7 bits (73), Expect = 0.56, Method: Composition-based stats.
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 6/45 (13%)
Query: 85 KVTVFYGTQTGTAEGFAKALAEEIKARYEKAAVKVVDLDDYAMDD 129
K+ +FYGTQTG + A+++ +E +VDL+D A D
Sbjct: 2 KIGLFYGTQTGVTQTIAESIQQEFGGE------SIVDLNDIANAD 40
>pdb|1CZL|A Chain A, Comparisons Of Wild Type And Mutant Flavodoxins From
Anacystis Nidulans. Structural Determinants Of The Redox
Potentials.
pdb|1CZN|A Chain A, Refined Structures Of Oxidized Flavodoxin From Anacystis
Nidulans
pdb|1CZU|A Chain A, Refined Structures Of Oxidized Flavodoxin From Anacystis
Nidulans
pdb|1D04|A Chain A, Comparisons Of Wild Type And Mutant Flavodoxins From
Anacystis Nidulans. Structural Determinants Of The Redox
Potentials.
pdb|1OFV|A Chain A, Flavodoxin From Anacystis Nidulans: Refinement Of Two
Forms Of The Oxidized Protein
Length = 169
Score = 32.7 bits (73), Expect = 0.57, Method: Composition-based stats.
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 6/45 (13%)
Query: 85 KVTVFYGTQTGTAEGFAKALAEEIKARYEKAAVKVVDLDDYAMDD 129
K+ +FYGTQTG + A+++ +E +VDL+D A D
Sbjct: 2 KIGLFYGTQTGVTQTIAESIQQEFGGE------SIVDLNDIANAD 40
>pdb|3ESX|A Chain A, E16ke61kd126kd150k Flavodoxin From Anabaena
pdb|3ESX|B Chain B, E16ke61kd126kd150k Flavodoxin From Anabaena
Length = 169
Score = 32.3 bits (72), Expect = 0.69, Method: Composition-based stats.
Identities = 15/45 (33%), Positives = 27/45 (60%), Gaps = 4/45 (8%)
Query: 85 KVTVFYGTQTGTAEGFAKALAEE----IKARYEKAAVKVVDLDDY 125
K+ +FYGTQTG + A+ + +E + ++ + +V DL+DY
Sbjct: 3 KIGLFYGTQTGKTKSVAEIIRDEFGNDVVTLHDVSQAEVTDLNDY 47
>pdb|3ESY|A Chain A, E16ke61k Flavodoxin From Anabaena
pdb|3ESY|B Chain B, E16ke61k Flavodoxin From Anabaena
pdb|3ESY|C Chain C, E16ke61k Flavodoxin From Anabaena
pdb|3ESY|D Chain D, E16ke61k Flavodoxin From Anabaena
Length = 169
Score = 32.3 bits (72), Expect = 0.73, Method: Composition-based stats.
Identities = 15/45 (33%), Positives = 27/45 (60%), Gaps = 4/45 (8%)
Query: 85 KVTVFYGTQTGTAEGFAKALAEE----IKARYEKAAVKVVDLDDY 125
K+ +FYGTQTG + A+ + +E + ++ + +V DL+DY
Sbjct: 3 KIGLFYGTQTGKTKSVAEIIRDEFGNDVVTLHDVSQAEVTDLNDY 47
>pdb|1C7E|A Chain A, D95e Hydroquinone Flavodoxin Mutant From D. Vulgaris
pdb|1C7E|B Chain B, D95e Hydroquinone Flavodoxin Mutant From D. Vulgaris
pdb|1C7F|A Chain A, D95e Oxidized Flavodoxin Mutant From D. Vulgaris
pdb|1C7F|B Chain B, D95e Oxidized Flavodoxin Mutant From D. Vulgaris
Length = 147
Score = 32.3 bits (72), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 60/150 (40%), Gaps = 15/150 (10%)
Query: 85 KVTVFYGTQTGTAEGFAKALAEEI-KARYEKAAVKVVDLDDYAMDDEQYEEKLKKETLAF 143
K + YG+ TG E A+ +A E+ A YE + ++ + + L
Sbjct: 2 KALIVYGSTTGNTEYTAETIARELADAGYEVDSRDAASVEAGGL--------FEGFDLVL 53
Query: 144 FMVATYGDGEPTDNAARFYKWFTEGNDRGPWLQQLKFGVFGLGNRQYEHFNKIGIVLDEE 203
+T+GD + + F F + G Q K FG G YE+F ++E+
Sbjct: 54 LGCSTWGD-DSIELQDDFIPLFDSLEETGA--QGRKVACFGCGESSYEYFCGAVDAIEEK 110
Query: 204 LCKQGGARLVPLGL--GDDDQCIEDDFTAW 231
L K GA +V GL D + DD W
Sbjct: 111 L-KNLGAEIVQDGLRIDGDPRAARDDIVGW 139
>pdb|1FX1|A Chain A, A Crystallographic Structural Study Of The Oxidation
States Of Desulfovibrio Vulgaris Flavodoxin
Length = 148
Score = 32.3 bits (72), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 61/150 (40%), Gaps = 15/150 (10%)
Query: 85 KVTVFYGTQTGTAEGFAKALAEEI-KARYEKAAVKVVDLDDYAMDDEQYEEKLKKETLAF 143
K + YG+ TG E A+ +A ++ A YE + ++ + + L
Sbjct: 3 KALIVYGSTTGNTEYTAETIARQLANAGYEVDSRDAASVEAGGL--------FEGFDLVL 54
Query: 144 FMVATYGDGEPTDNAARFYKWFTEGNDRGPWLQQLKFGVFGLGNRQYEHFNKIGIVLDEE 203
+T+GD + + F F + G Q K FG G+ YE+F ++E+
Sbjct: 55 LGCSTWGD-DSIELQDDFIPLFDSLEETGA--QGRKVACFGCGDSSYEYFCGAVDAIEEK 111
Query: 204 LCKQGGARLVPLGL--GDDDQCIEDDFTAW 231
L K GA +V GL D + DD W
Sbjct: 112 L-KNLGAEIVQDGLRIDGDPRAARDDIVGW 140
>pdb|3ESZ|A Chain A, K2ak3a Flavodoxin From Anabaena
pdb|3ESZ|B Chain B, K2ak3a Flavodoxin From Anabaena
Length = 169
Score = 32.0 bits (71), Expect = 0.90, Method: Composition-based stats.
Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 4/44 (9%)
Query: 86 VTVFYGTQTGTAEGFAKALAEE----IKARYEKAAVKVVDLDDY 125
+ +FYGTQTG E A+ + +E + ++ + +V DL+DY
Sbjct: 4 IGLFYGTQTGKTESVAEIIRDEFGNDVVTLHDVSQAEVTDLNDY 47
>pdb|1KRH|A Chain A, X-Ray Stucture Of Benzoate Dioxygenase Reductase
pdb|1KRH|B Chain B, X-Ray Stucture Of Benzoate Dioxygenase Reductase
Length = 338
Score = 32.0 bits (71), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 24/39 (61%), Gaps = 4/39 (10%)
Query: 545 PIIMVGPGTGLAPFRGFLQERMALKQDGAQLGPALLFFG 583
P++M+ GTG+APF LQ L+Q G++ P L FG
Sbjct: 212 PVLMLAGGTGIAPFLSMLQ---VLEQKGSE-HPVRLVFG 246
>pdb|1AKW|A Chain A, G61l Oxidized Flavodoxin Mutant
Length = 147
Score = 31.6 bits (70), Expect = 1.2, Method: Composition-based stats.
Identities = 42/150 (28%), Positives = 61/150 (40%), Gaps = 15/150 (10%)
Query: 85 KVTVFYGTQTGTAEGFAKALAEEI-KARYEKAAVKVVDLDDYAMDDEQYEEKLKKETLAF 143
K + YG+ TG E A+ +A E+ A YE VD D A + + L
Sbjct: 2 KALIVYGSTTGNTEYTAETIARELADAGYE------VDSRDAA--SVEAGGLFEGFDLVL 53
Query: 144 FMVATYGDGEPTDNAARFYKWFTEGNDRGPWLQQLKFGVFGLGNRQYEHFNKIGIVLDEE 203
+T+ D + + F F + G Q K FG G+ YE+F ++E+
Sbjct: 54 LGCSTWLD-DSIELQDDFIPLFDSLEETGA--QGRKVACFGCGDSSYEYFCGAVDAIEEK 110
Query: 204 LCKQGGARLVPLGL--GDDDQCIEDDFTAW 231
L K GA +V GL D + DD W
Sbjct: 111 L-KNLGAEIVQDGLRIDGDPRAARDDIVGW 139
>pdb|1F4P|A Chain A, Y98w Flavodoxin Mutant 1.5a (D. Vulgaris)
Length = 147
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 61/150 (40%), Gaps = 15/150 (10%)
Query: 85 KVTVFYGTQTGTAEGFAKALAEEI-KARYEKAAVKVVDLDDYAMDDEQYEEKLKKETLAF 143
K + YG+ TG E A+ +A E+ A YE + ++ + + L
Sbjct: 2 KALIVYGSTTGNTEYTAETIARELADAGYEVDSRDAASVEAGGL--------FEGFDLVL 53
Query: 144 FMVATYGDGEPTDNAARFYKWFTEGNDRGPWLQQLKFGVFGLGNRQYEHFNKIGIVLDEE 203
+T+GD + + F F + G Q K FG G+ +E+F ++E+
Sbjct: 54 LGCSTWGD-DSIELQDDFIPLFDSLEETGA--QGRKVACFGCGDSSWEYFCGAVDAIEEK 110
Query: 204 LCKQGGARLVPLGL--GDDDQCIEDDFTAW 231
L K GA +V GL D + DD W
Sbjct: 111 L-KNLGAEIVQDGLRIDGDPRAARDDIVGW 139
>pdb|3NVM|A Chain A, Structural Basis For Substrate Placement By An Archaeal
Box CD Ribonucleoprotein Particle
Length = 371
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 5/64 (7%)
Query: 185 LGNRQYEHFNKIGIVLDE-ELCKQGGAR----LVPLGLGDDDQCIEDDFTAWRELVWPEL 239
LG +E + K+G+ L + +Q GAR + + DD + W L +PEL
Sbjct: 110 LGENWFEEYYKVGVALTRMRIQEQSGARDKMVIQAIEALDDINLLVARLREWYSLHFPEL 169
Query: 240 DQLL 243
D+LL
Sbjct: 170 DELL 173
>pdb|2O89|A Chain A, S. Aureus Thioredoxin P31tC32S MUTANT
Length = 107
Score = 30.8 bits (68), Expect = 2.0, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 35/74 (47%), Gaps = 8/74 (10%)
Query: 89 FYGTQTGTAEGFAKALAEEIKARYE-KAAVKVVDLDDYAMDDEQYEEKLKKETLAFFMVA 147
F+ T GT++ A L EE+ A YE KA + +D+ DE K E ++ +
Sbjct: 27 FWATWCGTSKMIAPVL-EELAADYEGKADILKLDV------DENPSTAAKYEVMSIPTLI 79
Query: 148 TYGDGEPTDNAARF 161
+ DG+P D F
Sbjct: 80 VFKDGQPVDKVVGF 93
>pdb|1AKR|A Chain A, G61a Oxidized Flavodoxin Mutant
Length = 147
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 60/150 (40%), Gaps = 15/150 (10%)
Query: 85 KVTVFYGTQTGTAEGFAKALAEEI-KARYEKAAVKVVDLDDYAMDDEQYEEKLKKETLAF 143
K + YG+ TG E A+ +A E+ A YE + ++ + + L
Sbjct: 2 KALIVYGSTTGNTEYTAETIARELADAGYEVDSRDAASVEAGGL--------FEGFDLVL 53
Query: 144 FMVATYGDGEPTDNAARFYKWFTEGNDRGPWLQQLKFGVFGLGNRQYEHFNKIGIVLDEE 203
+T+ D + + F F + G Q K FG G+ YE+F ++E+
Sbjct: 54 LGCSTWAD-DSIELQDDFIPLFDSLEETGA--QGRKVACFGCGDSSYEYFCGAVDAIEEK 110
Query: 204 LCKQGGARLVPLGL--GDDDQCIEDDFTAW 231
L K GA +V GL D + DD W
Sbjct: 111 L-KNLGAEIVQDGLRIDGDPRAARDDIVGW 139
>pdb|2O85|A Chain A, S. Aureus Thioredoxin P31t Mutant
Length = 107
Score = 30.4 bits (67), Expect = 2.7, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 8/74 (10%)
Query: 89 FYGTQTGTAEGFAKALAEEIKARYE-KAAVKVVDLDDYAMDDEQYEEKLKKETLAFFMVA 147
F+ T GT + A L EE+ A YE KA + +D+ DE K E ++ +
Sbjct: 27 FWATWCGTCKMIAPVL-EELAADYEGKADILKLDV------DENPSTAAKYEVMSIPTLI 79
Query: 148 TYGDGEPTDNAARF 161
+ DG+P D F
Sbjct: 80 VFKDGQPVDKVVGF 93
>pdb|1AZL|A Chain A, G61v Flavodoxin Mutant From Desulfovibrio Vulgaris
Length = 147
Score = 29.6 bits (65), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 60/150 (40%), Gaps = 15/150 (10%)
Query: 85 KVTVFYGTQTGTAEGFAKALAEEI-KARYEKAAVKVVDLDDYAMDDEQYEEKLKKETLAF 143
K + YG+ TG E A+ +A E+ A YE + ++ + + L
Sbjct: 2 KALIVYGSTTGNTEYTAETIARELADAGYEVDSRDAASVEAGGL--------FEGFDLVL 53
Query: 144 FMVATYGDGEPTDNAARFYKWFTEGNDRGPWLQQLKFGVFGLGNRQYEHFNKIGIVLDEE 203
+T+ D + + F F + G Q K FG G+ YE+F ++E+
Sbjct: 54 LGCSTWVD-DSIELQDDFIPLFDSLEETGA--QGRKVACFGCGDSSYEYFCGAVDAIEEK 110
Query: 204 LCKQGGARLVPLGL--GDDDQCIEDDFTAW 231
L K GA +V GL D + DD W
Sbjct: 111 L-KNLGAEIVQDGLRIDGDPRAARDDIVGW 139
>pdb|2O87|A Chain A, S. Aureus Thioredoxin P31s Mutant
Length = 106
Score = 29.3 bits (64), Expect = 6.7, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 6/73 (8%)
Query: 89 FYGTQTGTAEGFAKALAEEIKARYEKAAVKVVDLDDYAMDDEQYEEKLKKETLAFFMVAT 148
F+ T G+ + A L EE+ A YE A ++ LD DE K E ++ +
Sbjct: 26 FWATWCGSCKMIAPVL-EELAADYEGKA-DILKLDV----DENPSTAAKYEVMSIPTLIV 79
Query: 149 YGDGEPTDNAARF 161
+ DG+P D F
Sbjct: 80 FKDGQPVDKVVGF 92
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.136 0.419
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,902,405
Number of Sequences: 62578
Number of extensions: 825152
Number of successful extensions: 1799
Number of sequences better than 100.0: 109
Number of HSP's better than 100.0 without gapping: 67
Number of HSP's successfully gapped in prelim test: 42
Number of HSP's that attempted gapping in prelim test: 1571
Number of HSP's gapped (non-prelim): 144
length of query: 599
length of database: 14,973,337
effective HSP length: 104
effective length of query: 495
effective length of database: 8,465,225
effective search space: 4190286375
effective search space used: 4190286375
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 54 (25.4 bits)